316 200 0 0 chr17 1 56 -89504497 - Alu SINE Alu -247 55 1 2325 82 10 0 chr17 66 371 -89504182 - AluSx SINE Alu -4 308 1 2014 121 3 16 chr17 684 851 -89503702 - AluJb SINE Alu -11 301 138 2138 105 3 7 chr17 851 1156 -89503397 - AluY SINE Alu -7 304 1 2014 121 3 16 chr17 1156 1293 -89503260 - AluJb SINE Alu -174 138 1 1874 101 0 8 chr17 1441 1698 -89502855 - AluSx SINE Alu -57 255 1 223 278 0 0 chr17 1990 2044 -89502509 - L2 LINE L2 -2 3270 3217 2232 106 3 0 chr17 2215 2516 -89502037 + AluSx SINE Alu 1 302 -10 210 333 42 0 chr17 3102 3198 -89501355 + MIR3 SINE MIR 109 208 0 485 294 63 50 chr17 3461 3517 -89501036 - MIR SINE MIR 0 262 208 2202 91 0 10 chr17 3517 3825 -89500728 - AluY SINE Alu -6 305 1 485 294 63 50 chr17 3825 3989 -89500564 - MIR SINE MIR -54 208 39 1523 97 0 18 chr17 4525 4752 -89499801 - AluSg SINE Alu -87 223 1 1310 130 0 5 chr17 5897 6097 -89498456 + AluSq SINE Alu 30 228 -85 2368 67 13 13 chr17 6232 6367 -89498186 + AluSx SINE Alu 1 135 -177 2051 120 3 7 chr17 6367 6675 -89497878 + AluSp SINE Alu 1 307 -6 2368 67 13 13 chr17 6675 6851 -89497702 + AluSx SINE Alu 134 312 0 2390 54 0 0 chr17 7098 7396 -89497157 + AluY SINE Alu 1 298 -13 1633 129 4 0 chr17 8073 8313 -89496240 + AluSx SINE Alu 54 294 -18 208 293 0 0 chr17 8450 8508 -89496045 - L2 LINE L2 -638 2676 2619 837 141 7 28 chr17 8516 8658 -89495895 + AluJo SINE Alu 1 139 -173 1607 148 0 76 chr17 8660 8801 -89495752 + AluJo SINE Alu 5 110 -202 2460 42 0 0 chr17 8801 9090 -89495463 + AluY SINE Alu 5 293 -18 1607 148 0 76 chr17 9090 9265 -89495288 + AluJo SINE Alu 110 297 -15 293 174 153 41 chr17 9391 9408 -89495145 + MER5A DNA MER1_type 1 15 -174 1963 118 20 14 chr17 9408 9705 -89494848 + AluSx SINE Alu 3 301 -11 293 174 153 41 chr17 9705 9785 -89494768 + MER5A DNA MER1_type 15 109 -80 980 98 0 0 chr17 10375 10507 -89494046 - AluSq/x SINE Alu -181 132 1 228 160 9 66 chr17 11833 11939 -89492614 + GA-rich Low_complexity Low_complexity 2 101 0 264 287 46 11 chr17 12095 12182 -89492371 + L1MC/D LINE L1 5576 5665 -2143 479 204 0 11 chr17 12185 12278 -89492275 - MER8 DNA MER2_type 0 239 148 2172 100 0 7 chr17 12279 12578 -89491975 + AluSx SINE Alu 1 297 -15 997 67 0 30 chr17 12751 12886 -89491667 + AluY SINE Alu 1 131 -180 2117 84 40 7 chr17 12888 13185 -89491368 + AluY SINE Alu 1 307 -4 285 248 28 9 chr17 13190 13299 -89491254 + L1M4 LINE L1 4499 4609 -1537 2038 112 7 0 chr17 14090 14386 -89490167 - AluSx SINE Alu -14 298 1 1057 81 7 0 chr17 14728 14864 -89489689 - AluSq/x SINE Alu -175 137 1 2384 67 0 16 chr17 14976 15292 -89489261 - AluY SINE Alu 0 311 1 275 158 0 4 chr17 15292 15351 -89489202 - Alu SINE Alu -255 44 1 21 0 0 0 chr17 15620 15641 -89488912 + AT_rich Low_complexity Low_complexity 1 21 0 1230 64 0 0 chr17 16508 16665 -89487888 + AluSq SINE Alu 1 157 -156 632 256 12 12 chr17 17013 17173 -89487380 - MER5A DNA MER1_type -29 160 1 2127 111 0 0 chr17 17297 17594 -89486959 - AluSx SINE Alu -15 297 1 2487 53 3 0 chr17 17599 17901 -89486652 - AluY SINE Alu -8 303 1 23 0 0 0 chr17 17901 17924 -89486629 + AT_rich Low_complexity Low_complexity 1 23 0 804 147 0 0 chr17 17979 18108 -89486445 - AluSc SINE Alu -5 304 176 867 68 17 0 chr17 18209 18327 -89486226 + AluY SINE Alu 181 300 -11 243 88 0 0 chr17 18707 18741 -89485812 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 712 75 0 0 chr17 18817 18911 -89485642 - AluY SINE Alu -14 297 204 1792 89 0 0 chr17 18911 19146 -89485407 - AluSc SINE Alu -74 235 1 388 244 16 11 chr17 19433 19559 -89484994 + MIR SINE MIR 104 229 -33 375 192 83 154 chr17 20061 20130 -89484423 - MER2 DNA MER2_type 0 345 273 2129 112 0 0 chr17 20130 20434 -89484119 + AluSx SINE Alu 1 304 -8 1890 118 13 41 chr17 20435 20749 -89483804 + AluSx SINE Alu 1 305 -7 375 192 83 154 chr17 20749 20917 -89483636 - MER2 DNA MER2_type -71 274 123 438 148 28 46 chr17 20918 21026 -89483527 + L1MA4 LINE L1 6195 6300 0 445 235 52 52 chr17 21063 21199 -89483354 - MER2 DNA MER2_type -209 136 1 201 231 62 0 chr17 21248 21313 -89483240 - MER5B DNA MER1_type -106 72 4 1906 144 3 7 chr17 21860 22159 -89482394 - AluSx SINE Alu -14 298 1 311 256 31 62 chr17 22161 22290 -89482263 - HAL1 LINE L1 -583 1924 1800 780 263 85 18 chr17 22997 23278 -89481275 - MER102b DNA MER1_type 0 341 42 493 343 52 45 chr17 23403 23450 -89481103 - L3 LINE CR1 -860 717 672 2196 111 0 0 chr17 23450 23757 -89480796 - AluSx SINE Alu -5 307 1 493 343 52 45 chr17 23757 23995 -89480558 - L3 LINE CR1 -905 672 430 1485 165 104 4 chr17 24705 24984 -89479569 - AluJo SINE Alu -5 307 1 212 261 0 0 chr17 24988 25034 -89479519 + T-rich Low_complexity Low_complexity 5 50 0 1911 128 0 42 chr17 25446 25758 -89478795 + AluSx SINE Alu 1 299 -13 182 36 0 36 chr17 25950 25978 -89478575 + (CGGGGG)n Simple_repeat Simple_repeat 2 28 0 2123 54 0 0 chr17 27433 27691 -89476862 + AluSx SINE Alu 39 296 -16 1389 137 82 4 chr17 27947 28180 -89476373 + AluJo SINE Alu 14 264 -48 2116 111 0 10 chr17 28358 28656 -89475897 + AluSx SINE Alu 1 295 -17 2000 151 0 0 chr17 30030 30341 -89474212 - AluSx SINE Alu -1 311 1 447 71 0 0 chr17 30341 30397 -89474156 - AluSq/x SINE Alu -177 135 80 1420 142 0 0 chr17 30399 30611 -89473942 - AluSq SINE Alu -101 212 1 268 348 68 59 chr17 30737 30973 -89473580 - L2 LINE L2 -8 3264 3027 1954 112 18 3 chr17 31089 31375 -89473178 - AluSg SINE Alu -20 290 1 1712 165 34 3 chr17 31433 31724 -89472829 - AluJb SINE Alu -10 302 3 559 149 0 26 chr17 32799 32967 -89471586 + AluSq SINE Alu 1 206 -107 2099 110 3 0 chr17 33174 33466 -89471087 - AluSx SINE Alu -19 293 1 2030 119 10 0 chr17 33469 33762 -89470791 - AluSq SINE Alu -17 296 1 267 31 0 0 chr17 34304 34336 -89470217 + (TG)n Simple_repeat Simple_repeat 2 33 0 1500 182 7 20 chr17 34336 34493 -89470060 - AluJo SINE Alu -20 292 139 1975 89 32 0 chr17 34493 34774 -89469779 - AluSg SINE Alu -8 302 13 1500 182 7 20 chr17 34774 34912 -89469641 - AluJo SINE Alu -173 139 1 1408 93 15 0 chr17 35631 35835 -89468718 - AluSg/x SINE Alu -16 296 90 2358 77 0 3 chr17 35938 36238 -89468315 - AluSp SINE Alu -14 299 1 545 242 47 32 chr17 36240 36430 -89468123 - Charlie2 DNA MER1_type -556 2306 2114 455 137 41 0 chr17 36444 36517 -89468036 + FLAM_A SINE Alu 56 131 -11 952 275 30 0 chr17 36518 36780 -89467773 - Charlie2 DNA MER1_type -737 2125 1856 2308 80 3 0 chr17 36794 37096 -89467457 - AluSx SINE Alu -9 303 1 536 268 22 0 chr17 37218 37356 -89467197 - Charlie2 DNA MER1_type -2713 149 9 2293 95 7 0 chr17 37943 38247 -89466306 - AluSq SINE Alu -7 306 1 1033 89 0 0 chr17 38247 38382 -89466171 - AluSq/x SINE Alu -178 135 1 572 233 25 17 chr17 38386 38506 -89466047 - FLAM_A SINE Alu -15 127 7 2380 42 0 0 chr17 38513 38821 -89465732 - AluY SINE Alu 0 308 1 316 200 0 0 chr17 38832 38892 -89465661 - L1MA6 LINE L1 -5 6295 6236 240 307 162 0 chr17 39081 39224 -89465329 + MIR3 SINE MIR 10 179 -75 383 308 94 23 chr17 39237 39469 -89465084 - MIR SINE MIR -6 256 14 2326 70 3 0 chr17 40561 40862 -89463691 - AluSx SINE Alu -10 302 1 2036 60 53 21 chr17 42003 42286 -89462267 + AluSc SINE Alu 1 292 -17 766 79 4 2 chr17 42356 42597 -89461956 + AluSx SINE Alu 1 290 -19 291 106 0 0 chr17 42717 42764 -89461789 + Alu SINE Alu 254 300 -2 1786 167 7 7 chr17 42825 43130 -89461423 + AluJb SINE Alu 1 305 -7 2270 74 0 0 chr17 43621 43905 -89460648 + AluSq SINE Alu 1 284 -29 201 300 0 67 chr17 43982 44072 -89460481 + L3 LINE CR1 1409 1492 -85 782 240 39 0 chr17 44538 44571 -89459982 + L1MB3 LINE L1 5970 6000 -183 207 0 0 0 chr17 44571 44594 -89459959 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 782 240 39 0 chr17 44594 44764 -89459789 + L1MB3 LINE L1 6000 6181 -2 2168 93 3 3 chr17 44773 45073 -89459480 + AluSq SINE Alu 1 300 -13 753 167 173 0 chr17 45089 45239 -89459314 + AluJo SINE Alu 122 297 -15 411 270 218 40 chr17 45240 45492 -89459061 - L1ME4a LINE L1 -34 6087 5791 23 0 0 0 chr17 45754 45777 -89458776 + AT_rich Low_complexity Low_complexity 1 23 0 1993 124 10 17 chr17 45777 46076 -89458477 - AluSx SINE Alu -15 297 1 263 373 40 0 chr17 46205 46355 -89458198 - L2 LINE L2 -868 2446 2291 474 291 40 7 chr17 47064 47212 -89457341 - MIR SINE MIR -29 233 81 2149 110 3 0 chr17 47213 47513 -89457040 + AluSx SINE Alu 1 301 -11 895 175 0 0 chr17 48035 48189 -89456364 + AluJo SINE Alu 1 154 -158 2119 102 10 0 chr17 48855 49149 -89455404 - AluSc SINE Alu -12 297 1 1160 99 0 12 chr17 49155 49317 -89455236 - FRAM SINE Alu -17 159 1 1935 104 24 0 chr17 49433 49721 -89454832 - AluSx SINE Alu -17 295 1 1793 92 53 32 chr17 50794 51075 -89453478 + AluSg SINE Alu 9 295 -15 608 300 130 0 chr17 51563 51793 -89452760 - MIR SINE MIR -1 261 2 252 0 0 0 chr17 51892 51920 -89452633 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1789 152 11 0 chr17 51922 52198 -89452355 - AluJb SINE Alu -33 279 1 2345 80 3 0 chr17 53838 54139 -89450414 - AluSp SINE Alu -10 303 2 2188 101 30 0 chr17 55555 55853 -89448700 + AluSx SINE Alu 1 307 -5 2174 119 3 0 chr17 56296 56599 -89447954 + AluSx SINE Alu 1 304 -8 1038 106 0 0 chr17 56829 56970 -89447583 + AluJb SINE Alu 1 141 -171 26 30 0 0 chr17 56987 57020 -89447533 + AT_rich Low_complexity Low_complexity 1 33 0 324 0 0 0 chr17 57654 57690 -89446863 + (CA)n Simple_repeat Simple_repeat 2 37 0 1743 190 3 0 chr17 57770 58075 -89446478 + AluSx SINE Alu 1 306 -6 2535 33 0 0 chr17 58245 58544 -89446009 + AluY SINE Alu 1 299 -12 461 423 127 14 chr17 59722 60228 -89444325 + L3 LINE CR1 185 747 -830 404 42 0 0 chr17 60228 60276 -89444277 + AluY SINE Alu 155 202 -109 1828 101 8 8 chr17 60288 60545 -89444008 + AluSq SINE Alu 5 261 -52 932 64 29 81 chr17 60645 60741 -89443812 - MER30 DNA MER1_type -60 170 85 2226 101 3 0 chr17 60741 61037 -89443516 - AluSp SINE Alu -16 297 1 932 64 29 81 chr17 61037 61113 -89443440 - MER30 DNA MER1_type -145 85 7 410 263 47 52 chr17 61114 61327 -89443226 + L3 LINE CR1 1018 1229 -348 232 274 88 26 chr17 61520 61633 -89442920 + MLT1K LTR MaLR 97 216 -372 441 257 117 9 chr17 61990 62104 -89442449 + L1MC5 LINE L1 7458 7558 -403 2201 73 0 4 chr17 62104 62379 -89442174 + AluY SINE Alu 23 296 -15 441 257 117 9 chr17 62379 62478 -89442075 + L1MC5 LINE L1 7558 7694 -267 271 272 39 10 chr17 62570 62673 -89441880 + L1MC5 LINE L1 7822 7927 -34 863 192 23 6 chr17 62802 62979 -89441574 + AluJb SINE Alu 121 300 -12 2099 135 3 0 chr17 63048 63359 -89441194 + AluSx SINE Alu 1 312 0 682 268 41 41 chr17 63543 63786 -89440767 - MIR SINE MIR -10 252 10 2177 106 3 0 chr17 65336 65638 -89438915 - AluSp SINE Alu -10 303 1 2317 74 0 0 chr17 65821 66118 -89438435 + AluY SINE Alu 1 297 -14 497 113 38 0 chr17 66279 66359 -89438194 + AluS SINE Alu 1 83 -230 202 244 0 0 chr17 67411 67456 -89437097 + T-rich Low_complexity Low_complexity 1 45 0 565 103 0 0 chr17 68082 68160 -89436393 + AluSq/x SINE Alu 58 135 -178 2096 76 0 28 chr17 68160 68449 -89436104 + AluSx SINE Alu 1 281 -31 397 278 43 43 chr17 70256 70418 -89434135 + MIR3 SINE MIR 5 166 -42 420 287 237 20 chr17 70666 71158 -89433395 - L2 LINE L2 -16 3297 2688 1326 102 0 0 chr17 71233 71420 -89433133 - AluSg/x SINE Alu 0 310 124 2413 49 7 10 chr17 71420 71728 -89432825 - AluY SINE Alu -4 307 1 1795 154 16 3 chr17 71755 72060 -89432493 - AluJb SINE Alu -3 309 1 202 289 141 58 chr17 72068 72189 -89432364 - MIR SINE MIR -122 140 10 2407 83 0 0 chr17 72515 72827 -89431726 - AluSx SINE Alu 0 312 1 832 92 0 0 chr17 74470 74589 -89429964 - AluSx SINE Alu 0 309 191 1042 93 7 0 chr17 74590 74730 -89429823 - AluSx SINE Alu -171 141 1 1644 119 67 28 chr17 74800 75085 -89429468 - AluSg SINE Alu -14 296 1 2163 85 0 0 chr17 75199 75471 -89429082 - AluSc SINE Alu -37 272 1 245 196 0 36 chr17 75587 75643 -89428910 + MLT2D LTR ERVL 1 54 -360 6079 196 18 12 chr17 75646 76947 -89427606 + ERVL LTR ERVL 3031 4338 -1426 5980 167 25 3 chr17 77331 78446 -89426107 + ERVL LTR ERVL 4298 5437 -327 248 217 17 0 chr17 78447 78507 -89426046 - Tigger1 DNA MER2_type -2 2416 2356 2064 131 3 7 chr17 78507 78813 -89425740 + AluSx SINE Alu 1 305 -7 2134 109 3 0 chr17 78814 79116 -89425437 + AluY SINE Alu 1 303 -8 1749 137 53 14 chr17 79116 79651 -89424902 - Tigger1 DNA MER2_type -210 2208 1582 2019 147 0 0 chr17 79652 79951 -89424602 - AluJb SINE Alu -13 299 1 369 0 0 0 chr17 80891 80932 -89423621 + (TG)n Simple_repeat Simple_repeat 2 42 0 2415 64 0 0 chr17 80942 81238 -89423315 - AluY SINE Alu -15 296 1 2064 112 10 10 chr17 81286 81598 -89422955 + AluSx SINE Alu 1 312 0 997 104 8 0 chr17 81633 81767 -89422786 + AluSg/x SINE Alu 144 278 -32 8160 51 24 4 chr17 81767 82754 -89421799 - LTR13 LTR ERVK 0 1007 1 315 0 0 0 chr17 82762 82797 -89421756 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2048 98 0 33 chr17 83544 83850 -89420703 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 84287 84337 -89420216 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 84597 84751 -89419802 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 85058 85104 -89419449 + G-rich Low_complexity Low_complexity 6 51 0 377 253 86 21 chr17 85313 85486 -89419067 + Charlie2 DNA MER1_type 2423 2610 -252 2311 70 0 26 chr17 85486 85799 -89418754 - AluY SINE Alu -6 305 1 377 253 86 21 chr17 85799 85811 -89418742 + Charlie2 DNA MER1_type 2610 2620 -242 2540 40 0 0 chr17 85899 86196 -89418357 - AluY SINE Alu -14 297 1 848 239 24 0 chr17 86196 86409 -89418144 + Charlie2 DNA MER1_type 2604 2821 -41 244 290 160 10 chr17 86584 86684 -89417869 - MIR SINE MIR -54 208 94 300 281 49 0 chr17 86788 86870 -89417683 + MIR SINE MIR 98 183 -79 230 322 59 67 chr17 87827 88066 -89416487 + MER102a DNA MER1_type 85 321 -9 261 329 58 44 chr17 88636 88773 -89415780 - MIR SINE MIR -54 154 16 813 254 40 20 chr17 92477 92678 -89411875 + MIR SINE MIR 21 225 -37 23 0 0 0 chr17 97886 97909 -89406644 + AT_rich Low_complexity Low_complexity 1 23 0 1807 107 48 38 chr17 99840 100129 -89404424 + AluSg SINE Alu 1 292 -18 708 191 34 14 chr17 100129 100276 -89404277 + MER20 DNA MER1_type 69 218 -1 351 65 0 0 chr17 100674 100720 -89403833 + (TA)n Simple_repeat Simple_repeat 1 46 0 503 228 65 8 chr17 101648 101771 -89402782 - MIR SINE MIR -70 192 63 1800 61 5 0 chr17 102215 102429 -89402124 - AluY SINE Alu -13 298 84 1284 98 5 79 chr17 103493 103696 -89400857 + AluSg SINE Alu 1 188 -122 1609 84 10 0 chr17 103696 103898 -89400655 + AluSq SINE Alu 104 307 -6 1379 223 41 0 chr17 103899 104218 -89400335 + MER63 DNA MER1_type 680 1011 -49 2330 91 0 0 chr17 104243 104529 -89400024 - AluSx SINE Alu -26 286 1 1122 164 0 0 chr17 104903 105068 -89399485 + AluJb SINE Alu 137 301 -11 2098 101 39 3 chr17 105219 105505 -89399048 + AluSc SINE Alu 1 296 -13 213 272 47 6 chr17 105897 106066 -89398487 + (AGGTG)n Simple_repeat Simple_repeat 3 178 0 266 265 29 12 chr17 106104 106274 -89398279 + (AGGTG)n Simple_repeat Simple_repeat 1 173 0 2521 71 0 7 chr17 107373 107682 -89396871 - AluSq SINE Alu -6 307 1 238 116 47 0 chr17 107752 107795 -89396758 - L1MB3 LINE L1 -7 6176 6132 2313 102 0 10 chr17 107795 108098 -89396455 - AluSx SINE Alu -12 300 1 851 173 13 13 chr17 111244 111400 -89393153 + BC200 scRNA scRNA 1 156 -44 1602 132 100 48 chr17 111404 111693 -89392860 + AluJo SINE Alu 1 304 -8 2324 106 0 3 chr17 111992 112293 -89392260 + AluSq SINE Alu 1 300 -13 207 0 0 0 chr17 112594 112617 -89391936 + (A)n Simple_repeat Simple_repeat 1 23 0 2343 78 23 19 chr17 113022 113330 -89391223 - AluSg SINE Alu -1 309 1 2241 122 3 0 chr17 113591 113895 -89390658 - AluSg SINE Alu -5 305 1 2225 111 0 3 chr17 114510 114808 -89389745 + AluSx SINE Alu 1 297 -15 2133 102 9 25 chr17 115280 115595 -89388958 + AluSx SINE Alu 1 310 -2 932 244 59 59 chr17 115907 116146 -89388407 + MER33 DNA MER1_type 1 242 -2343 2129 154 0 0 chr17 116146 116451 -89388102 - AluJo SINE Alu -2 310 6 932 244 59 59 chr17 116451 116535 -89388018 + MER33 DNA MER1_type 241 324 0 1230 209 25 48 chr17 116705 117020 -89387533 - AluJo SINE Alu -4 308 1 2310 114 0 0 chr17 117306 117613 -89386940 + AluSx SINE Alu 1 307 -5 514 217 85 0 chr17 118337 118466 -89386087 + MIR SINE MIR 80 219 -43 2106 130 0 3 chr17 118467 118760 -89385793 + AluJb SINE Alu 1 292 -20 1252 114 0 16 chr17 118768 118952 -89385601 + AluSg/x SINE Alu 128 308 -4 2140 97 41 3 chr17 119080 119370 -89385183 + AluSp SINE Alu 1 301 -12 2290 125 0 0 chr17 120148 120459 -89384094 + AluSx SINE Alu 1 311 -1 240 318 93 6 chr17 120590 120749 -89383804 - MIR SINE MIR -60 148 20 198 246 0 62 chr17 120831 120896 -89383657 - MIR3 SINE MIR -40 168 108 2318 93 3 6 chr17 120927 121238 -89383315 + AluSq SINE Alu 1 310 -3 283 270 180 0 chr17 121701 121812 -89382741 + MIR SINE MIR 12 142 -120 1777 90 0 25 chr17 121988 122232 -89382321 + AluSg/x SINE Alu 70 307 -5 1183 172 31 26 chr17 123372 123544 -89381009 - AluJo SINE Alu -7 305 130 2527 67 3 3 chr17 123544 123844 -89380709 - AluSp SINE Alu -13 300 1 1183 172 31 26 chr17 123844 123898 -89380655 - AluJo SINE Alu -182 130 78 2455 86 7 0 chr17 124205 124508 -89380045 - AluSx SINE Alu -7 305 1 365 97 32 0 chr17 124999 125061 -89379492 + GA-rich Low_complexity Low_complexity 3 66 0 290 212 21 88 chr17 125068 125261 -89379292 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 411 257 9 0 chr17 125313 125418 -89379135 + MLT2B1 LTR ERVL 1 106 -414 2032 144 7 3 chr17 125419 125725 -89378828 - AluSq SINE Alu -6 307 1 1691 184 3 7 chr17 125877 126171 -89378382 + AluJo SINE Alu 1 293 -19 280 274 20 89 chr17 126402 126548 -89378005 - MIR3 SINE MIR -58 150 15 1778 128 74 30 chr17 127180 127478 -89377075 + AluJb SINE Alu 1 311 -1 2338 101 3 3 chr17 127594 127901 -89376652 - AluSx SINE Alu -5 307 1 2631 32 9 25 chr17 128409 128725 -89375828 + AluY SINE Alu 1 311 0 2275 83 9 49 chr17 128890 129216 -89375337 - AluSq SINE Alu 0 313 1 1514 153 6 86 chr17 129967 130148 -89374405 - AluJo SINE Alu -10 302 108 450 0 0 0 chr17 130148 130198 -89374355 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2349 70 0 11 chr17 130198 130485 -89374068 - AluY SINE Alu -27 284 1 1514 153 6 86 chr17 130485 130628 -89373925 - AluJo SINE Alu -202 110 3 310 167 0 77 chr17 131299 131377 -89373176 - AluYa5 SINE Alu -119 182 111 2056 108 32 0 chr17 131377 131655 -89372898 + AluSx SINE Alu 10 296 -16 2438 57 0 0 chr17 131657 131975 -89372578 + AluY SINE Alu 1 318 0 1935 244 98 51 chr17 132322 132900 -89371653 - L1ME2 LINE L1 -10 6154 5528 1550 165 85 0 chr17 132900 133172 -89371381 + AluJb SINE Alu 1 295 -17 1935 244 98 51 chr17 133172 133375 -89371178 - L1ME2 LINE L1 -636 5528 5336 2108 93 11 0 chr17 134839 135108 -89369445 + AluSx SINE Alu 1 272 -40 2076 51 4 19 chr17 135208 135491 -89369062 + AluY SINE Alu 32 310 0 1764 176 0 38 chr17 135565 135878 -89368675 - AluJb SINE Alu -11 301 1 792 233 30 15 chr17 136175 136377 -89368176 - MER20 DNA MER1_type -14 205 1 2370 56 0 3 chr17 137546 137876 -89366677 + AluY SINE Alu 1 329 0 1768 104 120 0 chr17 138428 138687 -89365866 - AluSx SINE Alu -16 296 7 1766 135 53 0 chr17 139712 139993 -89364560 - AluSx SINE Alu -16 296 1 268 338 14 45 chr17 140108 140293 -89364260 - L1MC/D LINE L1 -299 5822 5688 2373 88 7 0 chr17 140293 140590 -89363963 - AluSx SINE Alu -12 300 2 268 338 14 45 chr17 140590 140661 -89363892 - L1MC/D LINE L1 -433 5688 5616 1370 203 29 22 chr17 142300 142616 -89361937 - L1MC2 LINE L1 -9 6335 6018 275 229 134 89 chr17 142616 142773 -89361780 + MER20 DNA MER1_type 53 216 -3 281 264 0 42 chr17 143205 143349 -89361204 + (GGTTG)n Simple_repeat Simple_repeat 2 139 0 232 300 0 39 chr17 143389 143569 -89360984 + (GGTTG)n Simple_repeat Simple_repeat 2 174 0 195 222 22 0 chr17 143768 143813 -89360740 + MIR SINE MIR 105 150 -112 1707 149 46 4 chr17 143993 144255 -89360298 + AluJb SINE Alu 1 273 -39 372 234 0 0 chr17 144257 144351 -89360202 + (CAGA)n Simple_repeat Simple_repeat 3 96 0 2343 78 0 26 chr17 144680 144987 -89359566 + AluY SINE Alu 1 299 -12 761 35 43 9 chr17 145573 145689 -89358864 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1843 98 78 0 chr17 145691 145946 -89358607 - AluSx SINE Alu -37 275 1 219 296 70 0 chr17 146207 146278 -89358275 - MIR SINE MIR -173 89 14 554 91 0 71 chr17 146376 146475 -89358078 - AluSp/q SINE Alu -10 303 212 290 154 19 0 chr17 146783 146835 -89357718 - MSTA LTR MaLR 0 428 376 * 395 216 0 0 chr17 146833 146907 -89357646 - AluJ/FRAM SINE Alu -3 299 226 2301 117 8 34 chr17 146924 146974 -89357579 - THE1C LTR MaLR 0 375 325 2225 99 14 0 chr17 146974 147267 -89357286 - AluSg SINE Alu -13 297 1 2301 117 8 34 chr17 147267 147601 -89356952 - THE1C LTR MaLR -50 325 1 2220 102 17 0 chr17 148064 148359 -89356194 - AluSx SINE Alu -12 300 1 691 205 40 145 chr17 148359 148656 -89355897 - MLT2D LTR ERVL -49 365 100 502 105 26 0 chr17 148656 148732 -89355821 + AluS SINE Alu 1 78 -235 2300 96 3 0 chr17 148889 149181 -89355372 + AluSx SINE Alu 1 293 -19 335 156 26 39 chr17 150161 150238 -89354315 - L1MC4 LINE L1 0 8042 7967 223 204 61 0 chr17 150591 150640 -89353913 - MER5A DNA MER1_type -133 56 5 1205 208 4 49 chr17 150698 150790 -89353763 - MER8 DNA MER2_type 0 239 144 1765 143 0 7 chr17 150790 151083 -89353470 + AluJo SINE Alu 1 291 -21 2188 100 10 0 chr17 151086 151385 -89353168 + AluY SINE Alu 1 302 -9 1205 208 4 49 chr17 151385 151533 -89353020 - MER8 DNA MER2_type -97 142 6 287 288 48 8 chr17 151533 151658 -89352895 - L1MC4 LINE L1 -156 7886 7757 * 2009 285 70 43 chr17 151651 152014 -89352539 - L1MC4 LINE L1 -319 7570 7218 1653 171 0 26 chr17 152014 152319 -89352234 - AluJo SINE Alu -15 297 1 2009 285 70 43 chr17 152319 152422 -89352131 - L1MC4 LINE L1 -671 7218 7119 1947 140 7 13 chr17 152422 152729 -89351824 + AluSx SINE Alu 1 305 -7 2009 285 70 43 chr17 152729 153118 -89351435 - L1MC4 LINE L1 -770 7119 6742 2015 132 0 0 chr17 153118 153414 -89351139 + AluSx SINE Alu 1 296 -16 2009 285 70 43 chr17 153414 153858 -89350695 - L1MC4 LINE L1 -1147 6742 6116 1306 156 0 0 chr17 153858 154070 -89350483 + AluSx SINE Alu 1 212 -100 430 121 0 0 chr17 154070 154128 -89350425 + AluSg/x SINE Alu 76 133 -176 1920 131 0 0 chr17 154128 154434 -89350119 + AluSx SINE Alu 1 306 0 2317 80 0 6 chr17 155793 156106 -89348447 - AluY SINE Alu 0 311 1 231 277 67 0 chr17 156114 156233 -89348320 + MER113 DNA MER1_type? 4 130 -391 869 165 0 0 chr17 156233 156366 -89348187 + FLAM_C SINE Alu 1 133 0 1390 115 5 10 chr17 156374 156582 -89347971 + AluJb SINE Alu 94 300 -12 680 278 0 6 chr17 156588 156764 -89347789 + MER113 DNA MER1_type? 296 470 -51 2222 107 3 0 chr17 156992 157301 -89347252 + AluSx SINE Alu 1 310 -2 800 250 38 0 chr17 157319 157503 -89347050 + MLT1A1 LTR MaLR 175 365 0 1368 173 4 15 chr17 157508 157768 -89346785 + MLT1A1-int LTR MaLR 2 258 -1477 2060 90 37 10 chr17 157768 158068 -89346485 + AluSx SINE Alu 1 308 -4 2204 83 10 0 chr17 158345 158635 -89345918 - AluSc SINE Alu -16 293 1 1647 161 3 10 chr17 159263 159554 -89344999 - AluJo SINE Alu -23 289 1 2241 98 0 0 chr17 159575 159871 -89344682 - AluSx SINE Alu -16 296 1 2360 59 0 23 chr17 159875 160181 -89344372 - AluY SINE Alu -12 299 1 327 275 56 112 chr17 160367 160528 -89344025 - L2 LINE L2 0 3313 3179 2140 88 7 3 chr17 160528 160824 -89343729 + AluSg SINE Alu 1 297 -13 327 275 56 112 chr17 160824 161000 -89343553 - L2 LINE L2 -134 3179 2995 1960 110 27 14 chr17 161086 161378 -89343175 - AluSx SINE Alu -16 296 1 1209 120 0 0 chr17 161403 161570 -89342983 + AluY SINE Alu 133 299 -12 264 237 34 0 chr17 161579 161638 -89342915 - MER5A DNA MER1_type -64 125 65 1232 186 8 27 chr17 162447 162710 -89341843 - AluJo SINE Alu -43 269 12 1981 136 3 3 chr17 162726 163100 -89341453 + AluSg SINE Alu 1 374 0 1806 96 3 108 chr17 163586 163921 -89340632 + AluSp SINE Alu 1 300 -13 2133 68 10 3 chr17 163977 164269 -89340284 - AluY SINE Alu -17 294 1 317 429 7 0 chr17 164293 164447 -89340106 - L2 LINE L2 -7 3265 3111 187 274 0 48 chr17 164486 164548 -89340005 + MIR SINE MIR 204 262 0 289 326 18 54 chr17 164962 165186 -89339367 - L2 LINE L2 -222 3050 2835 287 226 0 57 chr17 165194 165318 -89339235 + G-rich Low_complexity Low_complexity 3 119 0 294 270 180 0 chr17 166422 166533 -89338020 + MIR SINE MIR 12 142 -120 2221 93 3 6 chr17 166574 166887 -89337666 - AluSp SINE Alu -1 312 1 1026 126 0 0 chr17 166977 167128 -89337425 - FRAM SINE Alu -26 150 1 254 284 59 10 chr17 167360 167462 -89337091 + L2 LINE L2 3111 3217 -96 2434 65 0 3 chr17 167612 167918 -89336635 + AluSx SINE Alu 1 305 -7 1630 164 51 0 chr17 167997 168290 -89336263 - AluJb SINE Alu -4 308 1 224 309 62 10 chr17 168290 168387 -89336166 - L2 LINE L2 -219 3053 2952 216 320 40 10 chr17 168423 168523 -89336030 - L2 LINE L2 -219 3053 2951 409 238 79 0 chr17 168631 168732 -89335821 + MER20 DNA MER1_type 111 219 0 2094 109 0 16 chr17 168890 169202 -89335351 + AluSx SINE Alu 1 307 -5 873 166 43 21 chr17 170332 170519 -89334034 - AluJo SINE Alu -3 309 119 2468 60 0 0 chr17 170931 171233 -89333320 - AluY SINE Alu -9 302 1 1070 179 82 0 chr17 171322 171517 -89333036 + AluSg SINE Alu 1 211 -99 422 73 0 0 chr17 171517 171572 -89332981 + AluSg/x SINE Alu 76 130 -180 1573 118 114 0 chr17 171575 171820 -89332733 + AluSg SINE Alu 1 273 -37 342 170 0 0 chr17 171935 171988 -89332565 - Alu SINE Alu -16 286 234 351 270 42 112 chr17 172097 172338 -89332215 + L1ME1 LINE L1 5896 6119 -47 347 251 61 28 chr17 172338 172464 -89332089 + L1ME1 LINE L1 6046 6331 -3 2395 66 3 3 chr17 172482 172785 -89331768 + AluY SINE Alu 1 303 -8 1994 152 0 0 chr17 172793 173103 -89331450 + AluSx SINE Alu 1 310 -2 1305 96 5 24 chr17 173215 173423 -89331130 - AluSx SINE Alu -108 204 1 1906 128 7 0 chr17 175104 175400 -89329153 - AluSx SINE Alu -14 298 1 1547 84 13 4 chr17 175693 175920 -89328633 + AluY SINE Alu 1 229 -82 629 99 0 0 chr17 176021 176112 -89328441 - AluJ/FLAM SINE Alu -220 92 2 2328 64 7 3 chr17 176960 177257 -89327296 + AluY SINE Alu 1 298 -13 2302 56 3 30 chr17 177665 177970 -89326583 + AluY SINE Alu 1 297 -14 1642 115 13 102 chr17 178350 178703 -89325850 + AluSx SINE Alu 1 325 0 626 148 109 47 chr17 178703 178831 -89325722 + MER2 DNA MER2_type 3 138 -207 744 168 0 8 chr17 178840 178971 -89325582 - FLAM_C SINE Alu -3 130 1 182 269 191 28 chr17 178979 179120 -89325433 + L2 LINE L2 1506 1669 -1645 2215 94 3 0 chr17 179132 179430 -89325123 - AluSq SINE Alu -14 299 1 615 338 52 7 chr17 179647 179952 -89324601 + L2 LINE L2 2987 3305 -8 5233 66 8 0 chr17 180037 180690 -89323863 + L1PA8 LINE L1 5514 6171 -1 2065 90 7 0 chr17 180696 180973 -89323580 + AluSx SINE Alu 3 281 -31 251 311 82 7 chr17 180987 181122 -89323431 + L1ME LINE L1 5396 5540 -581 2009 96 50 0 chr17 183120 183400 -89321153 - AluSx SINE Alu -18 294 1 247 299 93 10 chr17 183607 183704 -89320849 + L2 LINE L2 3163 3267 -5 2145 104 0 10 chr17 184210 184517 -89320036 + AluSx SINE Alu 1 304 -8 3224 113 10 12 chr17 185703 186200 -89318353 + LTR10D LTR ERV1 1 496 -17 1985 108 40 0 chr17 186205 186501 -89318052 - AluSg1 SINE Alu 0 309 2 1867 103 10 61 chr17 186551 186862 -89317691 - AluSg SINE Alu -14 296 2 2324 100 0 0 chr17 187765 188075 -89316478 + AluSg SINE Alu 1 310 0 2148 92 0 3 chr17 189567 189991 -89314562 - AluSq SINE Alu 0 423 1 2063 106 3 0 chr17 190494 190786 -89313767 - AluSx SINE Alu -13 299 7 548 288 123 14 chr17 191454 191666 -89312887 - MIR SINE MIR -19 243 9 2300 64 7 0 chr17 192005 192301 -89312252 + AluY SINE Alu 1 298 -13 2196 110 7 0 chr17 192676 192985 -89311568 - AluSx SINE Alu -1 311 1 1716 129 50 4 chr17 192985 193265 -89311288 - AluJb SINE Alu -13 299 7 2308 84 0 10 chr17 193337 193647 -89310906 - AluSq SINE Alu -6 307 1 721 288 56 0 chr17 193650 193865 -89310688 - MIR SINE MIR -23 239 13 271 170 0 0 chr17 194151 194204 -89310349 - L1MB4 LINE L1 0 6180 6128 2229 90 3 3 chr17 194366 194678 -89309875 + AluSx SINE Alu 1 312 0 1549 181 4 0 chr17 195521 195798 -89308755 + AluJo SINE Alu 1 278 -34 252 0 0 0 chr17 195807 195835 -89308718 + (TAA)n Simple_repeat Simple_repeat 2 29 0 652 139 124 22 chr17 195837 195974 -89308579 + AluJb SINE Alu 131 281 -31 508 276 112 19 chr17 195997 196211 -89308342 - MIR SINE MIR -6 256 23 2135 111 7 0 chr17 197387 197685 -89306868 + AluSx SINE Alu 1 300 -12 2311 98 0 0 chr17 197685 197991 -89306562 + AluSx SINE Alu 1 306 -6 2437 59 0 3 chr17 198441 198747 -89305806 - AluY SINE Alu -6 305 1 702 49 0 0 chr17 198747 198829 -89305724 - AluY SINE Alu -167 144 63 1195 120 71 0 chr17 198829 199013 -89305540 - AluSx SINE Alu -115 197 1 1593 155 50 7 chr17 200843 201140 -89303413 - AluJo SINE Alu -2 310 1 230 261 0 155 chr17 201152 201294 -89303259 - MER5A DNA MER1_type -63 126 7 443 218 42 31 chr17 201401 201540 -89303013 + MER5B DNA MER1_type 56 178 0 2314 65 3 26 chr17 201741 202049 -89302504 + AluY SINE Alu 1 301 -10 2324 97 0 0 chr17 202671 202969 -89301584 - AluSx SINE Alu -14 298 1 2040 139 0 0 chr17 202973 203267 -89301286 - AluSx SINE Alu -18 294 1 567 194 0 10 chr17 203374 203477 -89301076 - FLAM_A SINE Alu -8 134 33 2251 105 7 0 chr17 203781 204086 -89300467 - AluSq SINE Alu -6 307 1 2404 72 0 7 chr17 204310 204617 -89299936 - AluY SINE Alu -6 305 1 322 251 61 28 chr17 204635 204761 -89299792 - L1ME1 LINE L1 -3 6331 6046 283 261 46 116 chr17 204761 205002 -89299551 - L1ME1 LINE L1 -47 6119 5896 2074 115 3 0 chr17 205701 205988 -89298565 + AluSx SINE Alu 1 288 -24 2364 57 3 3 chr17 206047 206343 -89298210 - AluY SINE Alu -15 296 1 330 272 48 0 chr17 206457 206560 -89297993 + MIR SINE MIR 100 207 -55 1953 121 0 7 chr17 206681 206970 -89297583 - AluJb SINE Alu -25 287 1 2333 76 3 3 chr17 207255 207559 -89296994 - AluY SINE Alu -7 304 1 27 0 0 0 chr17 207627 207654 -89296899 + AT_rich Low_complexity Low_complexity 1 27 0 391 310 187 0 chr17 207659 207814 -89296739 - MER5A DNA MER1_type -2 187 4 484 351 52 60 chr17 208162 208510 -89296043 - L2 LINE L2 0 3272 2928 2177 84 0 0 chr17 209800 210073 -89294480 + AluSq SINE Alu 6 278 -35 322 78 4 4 chr17 210073 210131 -89294422 - Alu SINE Alu -258 44 1 2200 113 0 3 chr17 210574 210885 -89293668 - AluSx SINE Alu -2 310 1 2145 99 3 7 chr17 210885 211177 -89293376 - AluSg SINE Alu -18 292 1 572 228 6 10 chr17 211803 212307 -89292246 + (CA)n Simple_repeat Simple_repeat 1 502 0 2542 46 0 0 chr17 212637 212941 -89291612 + AluY SINE Alu 1 304 -7 292 298 35 0 chr17 213689 213803 -89290750 + CT-rich Low_complexity Low_complexity 3 120 0 2204 96 3 6 chr17 213942 214254 -89290299 - AluSx SINE Alu -1 311 1 2205 105 0 7 chr17 216935 217239 -89287314 + AluSx SINE Alu 1 302 -10 2149 93 28 0 chr17 217321 217612 -89286941 + AluSx SINE Alu 1 299 -13 390 100 0 0 chr17 218951 219011 -89285542 + (TG)n Simple_repeat Simple_repeat 1 60 0 258 252 55 84 chr17 220008 220057 -89284496 - MIR SINE MIR -7 255 206 1890 89 0 4 chr17 220057 220326 -89284227 - AluSx SINE Alu 0 305 38 258 252 55 84 chr17 220326 220453 -89284100 - MIR SINE MIR -56 206 85 1306 82 0 0 chr17 221472 221643 -89282910 + AluSg/x SINE Alu 138 308 -4 189 0 0 0 chr17 222959 222980 -89281573 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1150 158 0 0 chr17 223607 223790 -89280763 + AluJo SINE Alu 112 294 -18 2386 66 10 3 chr17 224179 224482 -89280071 + AluSx SINE Alu 6 310 -2 2385 73 0 0 chr17 225789 226089 -89278464 - AluSx SINE Alu -12 300 1 1991 105 63 0 chr17 227654 227940 -89276613 - AluSx SINE Alu -8 304 1 2149 100 3 7 chr17 229311 229611 -89274942 - AluSg SINE Alu -11 299 1 753 171 8 0 chr17 229981 230110 -89274443 + FLAM_C SINE Alu 4 133 0 1172 37 0 0 chr17 231341 231475 -89273078 + AluY SINE Alu 1 134 -177 2102 70 49 7 chr17 231475 231761 -89272792 + AluY SINE Alu 1 298 -13 2213 46 49 7 chr17 232432 232717 -89271836 - AluY SINE Alu -14 297 1 304 68 0 0 chr17 232717 232761 -89271792 - Alu SINE Alu -259 44 1 * 344 94 16 16 chr17 232761 232805 -89271748 - AluS SINE Alu -259 44 1 188 330 198 0 chr17 234591 234697 -89269856 - L2 LINE L2 -1 3271 3145 296 339 36 49 chr17 235426 235650 -89268903 - L2 LINE L2 -462 2852 2632 844 169 0 0 chr17 236799 236929 -89267624 + FLAM_C SINE Alu 1 130 -13 524 276 113 23 chr17 236937 237158 -89267395 - MIR SINE MIR 0 262 22 805 157 0 50 chr17 237306 237446 -89267107 + FLAM_C SINE Alu 1 133 0 1668 156 10 30 chr17 237475 237777 -89266776 - AluJb SINE Alu -16 296 1 2244 120 0 0 chr17 238075 238383 -89266170 + AluSx SINE Alu 1 308 -4 473 309 100 60 chr17 238454 238661 -89265892 - L1ME4a LINE L1 -117 6004 5807 2089 99 0 33 chr17 238661 238963 -89265590 - AluSq SINE Alu -21 292 1 473 309 100 60 chr17 238963 239215 -89265338 - L1ME4a LINE L1 -314 5807 5567 2063 101 14 14 chr17 239215 239349 -89265204 + AluSg SINE Alu 1 134 -174 2268 94 0 7 chr17 239349 239656 -89264897 + AluY SINE Alu 1 305 -6 2063 101 14 14 chr17 239656 239829 -89264724 + AluSg SINE Alu 133 308 0 473 309 100 60 chr17 239829 240049 -89264504 - L1ME4a LINE L1 -554 5567 5308 22 35 0 0 chr17 240490 240519 -89264034 + AT_rich Low_complexity Low_complexity 1 29 0 2066 100 28 0 chr17 242287 242576 -89261977 + AluSx SINE Alu 1 297 -15 901 37 0 0 chr17 242936 243044 -89261509 + AluSq/x SINE Alu 1 108 -205 241 250 0 0 chr17 244022 244070 -89260483 - L2 LINE L2 -95 3218 3171 182 361 36 12 chr17 244301 244384 -89260169 - L2 LINE L2 -1165 2149 2065 2252 97 0 3 chr17 244708 245007 -89259546 + AluSx SINE Alu 6 303 -9 1684 63 5 14 chr17 245159 245380 -89259173 - AluY SINE Alu -8 303 85 231 312 9 28 chr17 245570 245679 -89258874 - L2 LINE L2 -507 2807 2701 2500 51 0 10 chr17 245726 246040 -89258513 - AluY SINE Alu 0 311 1 242 282 107 34 chr17 246152 246270 -89258283 - MIR SINE MIR -32 176 46 2110 110 0 27 chr17 246270 246571 -89257982 - AluSq SINE Alu -16 297 5 2118 127 3 6 chr17 246576 246890 -89257663 - AluSq SINE Alu 0 313 1 1273 255 56 32 chr17 247510 247922 -89256631 - MER21B LTR ERV1 -113 750 329 513 221 79 0 chr17 247949 248089 -89256464 - MER21B LTR ERV1 -615 248 98 364 209 70 0 chr17 248130 248216 -89256337 - MER21B LTR ERV1 -767 96 5 2048 129 0 0 chr17 248268 248563 -89255990 - AluSx SINE Alu -17 295 1 843 260 86 33 chr17 249106 249569 -89254984 - L2 LINE L2 -239 3074 2587 433 291 137 21 chr17 250371 250612 -89253941 - MLT1L LTR MaLR -8 607 339 961 144 58 0 chr17 250641 250814 -89253739 - AluSg/x SINE Alu -9 301 119 2159 105 0 3 chr17 250840 251136 -89253417 - AluSx SINE Alu -17 295 1 424 247 153 13 chr17 251148 251298 -89253255 - MLT1L LTR MaLR -326 289 119 333 215 14 97 chr17 252380 252524 -89252029 - L1ME4a LINE L1 -63 6058 5927 355 320 89 50 chr17 252558 252912 -89251641 - L1ME4a LINE L1 -353 5768 5388 2480 44 0 0 chr17 252912 253209 -89251344 - AluY SINE Alu -14 297 1 355 320 89 50 chr17 253209 253339 -89251214 - L1ME4a LINE L1 -733 5388 5265 662 318 68 85 chr17 253347 253707 -89250846 - L1ME4a LINE L1 -896 5250 4900 1586 210 6 16 chr17 253707 253883 -89250670 - AluJb SINE Alu -1 311 138 2282 95 0 25 chr17 253883 254200 -89250353 - AluSq SINE Alu -4 309 1 1586 210 6 16 chr17 254200 254337 -89250216 - AluJb SINE Alu -174 138 1 662 318 68 85 chr17 254337 254491 -89250062 - L1ME4a LINE L1 -1246 4900 4745 790 261 77 26 chr17 254914 255225 -89249328 + L1MC4a LINE L1 5607 5933 -1875 314 326 27 34 chr17 255247 255394 -89249159 + L1ME4a LINE L1 5974 6119 -2 344 307 51 7 chr17 256797 256934 -89247619 + L2 LINE L2 1596 1738 -1576 293 219 27 14 chr17 258666 258739 -89245814 + L2 LINE L2 3239 3312 -1 333 291 131 23 chr17 258755 258930 -89245623 + MIR SINE MIR 59 252 -10 21 0 0 0 chr17 259039 259060 -89245493 + AT_rich Low_complexity Low_complexity 1 21 0 1971 139 3 0 chr17 259070 259357 -89245196 - AluSx SINE Alu -24 288 1 2296 97 0 0 chr17 259359 259659 -89244894 - AluSx SINE Alu -10 302 3 1786 158 0 3 chr17 259664 259948 -89244605 - AluJb SINE Alu -17 295 13 2173 89 3 26 chr17 260004 260307 -89244246 - AluSx SINE Alu -16 296 1 229 94 0 0 chr17 260643 260675 -89243878 + Alu SINE Alu 6 37 -263 1306 82 0 0 chr17 261850 262021 -89242532 + AluSg/x SINE Alu 136 306 -4 189 0 0 0 chr17 263335 263356 -89241197 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1134 164 0 0 chr17 263982 264165 -89240388 + AluJo SINE Alu 112 294 -18 2312 76 10 3 chr17 264555 264857 -89239696 + AluSx SINE Alu 9 312 0 1806 243 98 51 chr17 265206 265784 -89238769 - L1ME2 LINE L1 -10 6154 5528 1426 167 93 0 chr17 265784 266054 -89238499 + AluJb SINE Alu 1 295 -17 1806 243 98 51 chr17 266054 266257 -89238296 - L1ME2 LINE L1 -636 5528 5336 2282 95 10 0 chr17 267721 268026 -89236527 + AluSx SINE Alu 1 308 -4 2291 84 3 0 chr17 268128 268424 -89236129 - AluSq SINE Alu -16 297 1 2092 98 0 0 chr17 269248 269522 -89235031 - AluSq SINE Alu -39 274 1 236 320 20 68 chr17 269911 270161 -89234392 + L2 LINE L2 2817 3054 -218 188 274 0 48 chr17 270570 270632 -89233921 - MIR SINE MIR 0 262 204 334 429 7 0 chr17 270671 270825 -89233728 + L2 LINE L2 3111 3265 -7 1488 64 5 0 chr17 270849 271037 -89233516 + AluY SINE Alu 1 189 -122 204 320 190 34 chr17 272903 273172 -89231381 + L2 LINE L2 2932 3242 -30 347 288 129 71 chr17 274250 274829 -89229724 + L1M2 LINE L1 757 1369 -5480 303 313 98 0 chr17 276038 276150 -89228403 + MIR SINE MIR 52 174 -88 2024 131 0 3 chr17 276705 277002 -89227551 + AluSx SINE Alu 1 296 -16 201 224 0 0 chr17 278170 278219 -89226334 - MIR SINE MIR -79 129 81 209 281 226 7 chr17 281681 281827 -89222726 - L2 LINE L2 -4 3268 3091 2204 134 0 0 chr17 282006 282313 -89222240 + AluSx SINE Alu 1 307 -5 794 105 48 32 chr17 282949 283073 -89221480 + FLAM_C SINE Alu 1 126 -17 1602 166 32 3 chr17 283089 283372 -89221181 + AluJo SINE Alu 1 291 -21 2211 81 10 3 chr17 283572 283868 -89220685 + AluY SINE Alu 1 298 -13 1987 119 0 32 chr17 283887 284197 -89220356 + AluSx SINE Alu 1 300 -12 412 305 26 26 chr17 289142 289293 -89215260 - MIR3 SINE MIR -55 153 3 257 268 0 0 chr17 289702 289758 -89214795 + C-rich Low_complexity Low_complexity 4 59 0 1858 147 0 10 chr17 289894 290193 -89214360 + AluJb SINE Alu 4 299 -13 721 283 91 8 chr17 291280 291641 -89212912 - MER90 LTR ERV1 -63 551 161 214 371 0 0 chr17 291805 291867 -89212686 + L2 LINE L2 3242 3303 -10 2123 95 3 14 chr17 291867 292162 -89212391 + AluSx SINE Alu 1 292 -20 319 234 36 36 chr17 292408 292519 -89212034 - MER103 DNA DNA -46 120 10 503 243 40 7 chr17 293572 293724 -89210829 + L1ME4a LINE L1 5961 6117 -4 1408 120 9 40 chr17 294919 295144 -89209409 + AluSg/x SINE Alu 93 310 0 2093 122 3 0 chr17 296071 296367 -89208186 - AluSx SINE Alu -11 301 5 2074 97 0 27 chr17 296371 296669 -89207884 - AluSx SINE Alu -22 290 1 1815 189 20 40 chr17 296703 297057 -89207496 + MER7A DNA MER2_type 2 346 0 563 165 0 10 chr17 297280 297377 -89207176 + AluS SINE Alu 1 96 -216 458 20 0 0 chr17 297502 297552 -89207001 + AluY SINE Alu 66 115 -196 * 645 83 0 0 chr17 297549 297633 -89206920 - AluS SINE Alu -229 84 1 1774 206 107 52 chr17 297910 298144 -89206409 - L1ME2 LINE L1 -59 6105 5885 2504 55 3 0 chr17 298144 298454 -89206099 - AluY SINE Alu 0 311 1 1774 206 107 52 chr17 298454 298855 -89205698 - L1ME2 LINE L1 -279 5885 5435 613 188 167 7 chr17 298861 299005 -89205548 - AluJo SINE Alu -109 203 37 520 150 37 1 chr17 299006 299133 -89205420 - L1M1 LINE L1 -732 5430 5299 350 292 11 0 chr17 299265 299354 -89205199 - L1ME2 LINE L1 -957 5189 5100 548 138 0 11 chr17 299474 299568 -89204985 + LTR23 LTR ERV1 313 405 -32 22 35 0 0 chr17 299575 299604 -89204949 + AT_rich Low_complexity Low_complexity 1 29 0 2159 112 0 40 chr17 299632 299955 -89204598 - AluSx SINE Alu -2 310 1 302 261 56 99 chr17 299956 299981 -89204572 - MIR SINE MIR -49 213 188 2617 33 0 23 chr17 299981 300286 -89204267 - AluY SINE Alu -13 298 1 302 261 56 99 chr17 300286 300421 -89204132 - MIR SINE MIR -74 188 60 2225 112 3 0 chr17 301377 301673 -89202880 + AluSq SINE Alu 1 297 -16 545 204 18 0 chr17 302260 302373 -89202180 - FLAM_A SINE Alu -18 115 1 21 36 0 0 chr17 302767 302795 -89201758 + AT_rich Low_complexity Low_complexity 1 28 0 2326 78 41 0 chr17 304233 304528 -89200025 - AluSp SINE Alu -2 311 5 2011 93 7 7 chr17 304986 305256 -89199297 - AluSp SINE Alu 0 313 44 23 0 0 0 chr17 305380 305403 -89199150 + AT_rich Low_complexity Low_complexity 1 23 0 2188 102 7 0 chr17 305403 305697 -89198856 + AluSp SINE Alu 1 296 -17 962 196 38 14 chr17 305820 306029 -89198524 - AluJb SINE Alu -13 299 86 615 231 98 47 chr17 306546 306684 -89197869 - MER4C LTR ERV1 0 687 557 3619 67 34 0 chr17 306684 307180 -89197373 + LTR10D LTR ERV1 1 513 0 615 231 98 47 chr17 307180 307368 -89197185 - MER4C LTR ERV1 -130 557 177 341 200 100 0 chr17 307373 307453 -89197100 - MER4C LTR ERV1 -201 264 177 257 224 158 0 chr17 307458 307534 -89197019 - MER4C LTR ERV1 -201 264 177 341 200 100 0 chr17 307539 307619 -89196934 - MER4C LTR ERV1 -201 264 177 308 225 100 0 chr17 307624 307704 -89196849 - MER4C LTR ERV1 -201 264 177 327 213 100 0 chr17 307709 307789 -89196764 - MER4C LTR ERV1 -201 264 177 284 179 167 0 chr17 307794 307872 -89196681 - MER4C LTR ERV1 -201 264 174 * 654 152 54 121 chr17 307848 308193 -89196360 - MER4C LTR ERV1 -283 381 1 198 230 23 126 chr17 311396 311483 -89193070 + MIR SINE MIR 79 156 -106 488 291 105 0 chr17 311864 312036 -89192517 + MIR SINE MIR 59 248 -14 181 279 81 62 chr17 312858 312973 -89191580 - MIR SINE MIR -50 212 92 612 196 8 45 chr17 312973 313106 -89191447 - FLAM_A SINE Alu -5 128 1 181 279 81 62 chr17 313106 313151 -89191402 - MIR SINE MIR -170 92 49 274 309 204 25 chr17 314613 314976 -89189577 + L2 LINE L2 2046 2473 -841 519 178 11 0 chr17 318999 319089 -89185464 - FLAM_A SINE Alu -41 101 11 1731 143 66 21 chr17 319288 319575 -89184978 + AluJb SINE Alu 1 300 -12 783 134 15 22 chr17 319584 319718 -89184835 + FLAM_C SINE Alu 1 133 0 1760 124 0 0 chr17 323107 323349 -89181204 - AluSq SINE Alu -2 311 70 239 125 0 0 chr17 323349 323389 -89181164 - Alu SINE Alu -135 168 129 187 264 126 35 chr17 323413 323500 -89181053 + MIR SINE MIR 57 151 -111 824 100 0 50 chr17 323544 323684 -89180869 + FLAM_C SINE Alu 1 133 0 2109 98 35 41 chr17 323693 324008 -89180545 + AluSq SINE Alu 1 313 0 1881 153 21 0 chr17 324315 324603 -89179950 + AluJb SINE Alu 1 294 -18 2416 84 7 0 chr17 324786 325085 -89179468 + AluSx SINE Alu 1 301 -11 215 262 0 117 chr17 325420 325523 -89179030 - MIR SINE MIR -107 155 65 2494 87 0 10 chr17 325870 326181 -89178372 + AluSx SINE Alu 1 308 -4 2312 120 0 0 chr17 326228 326537 -89178016 + AluSg SINE Alu 1 309 -1 305 183 211 29 chr17 326875 326979 -89177574 - MER5A DNA MER1_type -3 186 64 2139 105 3 43 chr17 327175 327499 -89177054 - AluSx SINE Alu -1 311 1 2185 106 39 0 chr17 327870 328153 -89176400 + AluSx SINE Alu 1 294 -18 667 161 24 0 chr17 328200 328324 -89176229 + FLAM_C SINE Alu 1 127 -6 1531 174 68 20 chr17 328568 328861 -89175692 + AluJo SINE Alu 1 307 -5 879 144 0 0 chr17 328864 328996 -89175557 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 330585 330610 -89173943 + GC_rich Low_complexity Low_complexity 1 25 0 186 174 0 0 chr17 330777 330823 -89173730 + G-rich Low_complexity Low_complexity 4 49 0 2131 83 4 0 chr17 331385 331679 -89172874 + AluSx SINE Alu 20 314 0 322 170 50 70 chr17 331972 332072 -89172481 + MIR3 SINE MIR 110 207 -1 2625 64 0 0 chr17 332808 333119 -89171434 + AluY SINE Alu 1 311 0 227 280 153 8 chr17 333380 333498 -89171055 + L2 LINE L2 3164 3298 -15 465 286 127 18 chr17 333515 333610 -89170943 - MIR SINE MIR -11 251 168 264 30 0 0 chr17 333610 333643 -89170910 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 286 127 18 chr17 333643 333767 -89170786 - MIR SINE MIR -94 168 8 350 264 19 38 chr17 333928 334034 -89170519 - MIR SINE MIR -46 216 113 1483 186 3 39 chr17 334657 334963 -89169590 + AluJb SINE Alu 3 297 -15 576 216 78 39 chr17 335135 335367 -89169186 + AluJo SINE Alu 5 245 -67 303 26 0 0 chr17 335367 335405 -89169148 + AluJ/FLAM SINE Alu 39 76 -226 532 234 65 50 chr17 335405 335606 -89168947 + AluJb SINE Alu 11 214 -98 461 103 0 0 chr17 335603 335671 -89168882 + AluJ/FLAM SINE Alu 11 78 -234 * 1753 146 38 0 chr17 335671 335932 -89168621 + AluJb SINE Alu 13 283 -29 423 0 0 0 chr17 335932 335979 -89168574 + (CA)n Simple_repeat Simple_repeat 2 48 0 336 293 115 16 chr17 336368 336559 -89167994 + MIR SINE MIR 21 230 -32 1334 200 35 24 chr17 337013 337303 -89167250 + AluJb SINE Alu 1 293 -19 608 152 9 0 chr17 337318 337423 -89167130 - FLAM_C SINE Alu -37 106 1 2330 57 0 4 chr17 337506 337786 -89166767 + AluY SINE Alu 31 309 -2 1641 164 43 4 chr17 337879 338159 -89166394 + AluJo SINE Alu 1 291 -21 328 93 0 0 chr17 338281 338324 -89166229 + Alu SINE Alu 1 43 -258 1501 71 6 0 chr17 338324 338506 -89166047 + AluSg/x SINE Alu 125 307 -5 243 0 0 0 chr17 338506 338533 -89166020 + (TA)n Simple_repeat Simple_repeat 1 27 0 368 239 28 9 chr17 338534 338594 -89165959 + L1ME LINE L1 5708 5772 -349 2362 110 0 0 chr17 338594 338902 -89165651 + AluSx SINE Alu 1 308 -4 368 239 28 9 chr17 338902 338950 -89165603 + L1ME LINE L1 5772 5818 -303 906 136 155 7 chr17 338954 339109 -89165444 + FRAM SINE Alu 1 172 -4 827 103 0 9 chr17 339134 339241 -89165312 - AluSg/x SINE Alu -129 181 76 1526 120 0 5 chr17 339241 339450 -89165103 - AluSx SINE Alu -100 212 5 1234 178 54 25 chr17 339469 339711 -89164842 - AluJo SINE Alu -25 287 39 2272 73 16 36 chr17 339761 340064 -89164489 - AluSg SINE Alu -13 297 1 536 15 0 0 chr17 340306 340394 -89164159 + AluY SINE Alu 217 304 0 2483 62 3 0 chr17 340404 340696 -89163857 + AluY SINE Alu 1 293 -18 203 0 37 0 chr17 340696 340723 -89163830 + (TA)n Simple_repeat Simple_repeat 2 29 0 412 186 17 68 chr17 341571 341689 -89162864 + MER20B DNA MER1_type 31 142 -641 1162 140 0 0 chr17 342875 343039 -89161514 - AluSg/x SINE Alu -15 295 132 369 0 0 0 chr17 343044 343085 -89161468 + (TATG)n Simple_repeat Simple_repeat 2 42 0 2128 109 3 32 chr17 343085 343390 -89161163 - AluSx SINE Alu -16 296 1 360 298 111 65 chr17 344139 344240 -89160313 + L2 LINE L2 2927 3022 -291 2509 89 0 0 chr17 344240 344553 -89160000 + AluSp SINE Alu 1 313 0 360 298 111 65 chr17 344553 344820 -89159733 + L2 LINE L2 3022 3312 -1 463 270 20 77 chr17 344833 345029 -89159524 + MIR SINE MIR 78 262 0 2737 163 62 23 chr17 345053 345492 -89159061 + L1ME1 LINE L1 5510 5977 -189 2481 91 0 0 chr17 345492 345799 -89158754 + AluSx SINE Alu 1 307 -5 2737 163 62 23 chr17 345799 345922 -89158631 + L1ME1 LINE L1 5977 6094 -72 1491 127 138 15 chr17 345949 346217 -89158336 - AluSx SINE Alu -1 301 1 240 236 69 0 chr17 346220 346292 -89158261 + L1ME1 LINE L1 6082 6158 -8 325 242 109 70 chr17 346490 346618 -89157935 - L1ME4a LINE L1 -195 5926 5794 633 72 0 52 chr17 346628 346725 -89157828 - FRAM SINE Alu -30 146 55 339 178 41 14 chr17 346776 346849 -89157704 - AluSc SINE Alu -105 194 120 22 70 0 0 chr17 346917 346960 -89157593 + AT_rich Low_complexity Low_complexity 1 43 0 2607 49 7 0 chr17 347395 347699 -89156854 + AluSg SINE Alu 1 306 -4 2339 81 0 16 chr17 348986 349293 -89155260 - AluSx SINE Alu -10 302 1 2395 97 3 0 chr17 349370 349680 -89154873 - AluSx SINE Alu -1 311 1 1093 99 0 7 chr17 349838 349979 -89154574 - FRAM SINE Alu -19 157 18 481 146 0 0 chr17 350247 350329 -89154224 - L1PB3 LINE L1 0 6154 6073 2161 100 3 3 chr17 350572 350873 -89153680 + AluSg SINE Alu 1 301 -9 2199 97 0 0 chr17 350935 351233 -89153320 + AluY SINE Alu 1 298 -13 1266 162 22 13 chr17 351836 352064 -89152489 - AluJb SINE Alu -25 287 58 198 0 0 0 chr17 352077 352099 -89152454 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1644 100 151 12 chr17 352102 352353 -89152200 - AluSx SINE Alu -16 286 1 251 159 48 0 chr17 352354 352417 -89152136 - L1MA8 LINE L1 -1 6290 6225 2068 120 7 0 chr17 352878 353186 -89151367 - AluSq SINE Alu -3 310 1 382 265 38 30 chr17 353355 353487 -89151066 - L2 LINE L2 0 3272 3140 335 296 45 56 chr17 353613 353792 -89150761 - L2 LINE L2 0 3313 3137 362 323 0 23 chr17 353918 354048 -89150505 - L2 LINE L2 -245 3068 2942 4483 155 78 35 chr17 354081 354995 -89149558 + LTR13 LTR ERVK 2 954 0 1614 182 23 10 chr17 355175 355483 -89149070 - AluJo SINE Alu 0 312 1 2310 85 7 0 chr17 355505 355810 -89148743 - AluSq SINE Alu -6 307 1 245 310 9 35 chr17 355907 356023 -89148530 - Charlie7 DNA MER1_type -2499 113 1 266 290 154 43 chr17 356033 356312 -89148241 - L2 LINE L2 -557 2757 2448 223 259 52 0 chr17 356369 356427 -89148126 - L2 LINE L2 -61 3211 3151 2233 101 0 0 chr17 356496 356793 -89147760 - AluSc SINE Alu -12 297 1 22 0 0 0 chr17 356803 356825 -89147728 + AT_rich Low_complexity Low_complexity 1 22 0 1508 157 0 88 chr17 357137 357307 -89147246 - AluJo SINE Alu -21 291 160 1905 122 0 17 chr17 357307 357595 -89146958 - AluSc SINE Alu -26 283 1 1508 157 0 88 chr17 357595 357743 -89146810 - AluJo SINE Alu -152 160 1 332 73 0 0 chr17 359089 359130 -89145423 + Alu SINE Alu 23 63 -240 812 134 0 0 chr17 359130 359249 -89145304 + AluJb SINE Alu 182 300 -12 1608 183 0 10 chr17 359831 360126 -89144427 - AluSx SINE Alu -20 292 1 2177 93 6 13 chr17 360355 360666 -89143887 - AluSg SINE Alu -1 309 1 649 258 27 5 chr17 360674 360860 -89143693 - AluJo SINE Alu -3 309 120 1574 125 29 96 chr17 361777 362090 -89142463 - AluJo SINE Alu -19 293 2 1715 177 0 6 chr17 362118 362429 -89142124 + AluSx SINE Alu 1 309 -3 2081 148 118 0 chr17 362453 362817 -89141736 - MSTA LTR MaLR -21 407 1 375 161 0 0 chr17 362978 363034 -89141519 + AluS SINE Alu 2 57 -244 6375 50 16 32 chr17 363388 364264 -89140289 - SVA Other Other 0 1386 525 472 267 0 0 chr17 365050 365155 -89139398 - MIR SINE MIR -60 148 44 541 206 41 0 chr17 366299 366396 -89138157 - Tigger3(Golem) DNA MER2_type 0 3029 2929 1661 118 103 79 chr17 366399 366728 -89137825 - MER1B DNA MER1_type 0 337 1 367 218 26 0 chr17 366745 366823 -89137730 - Tigger3(Golem) DNA MER2_type -2949 80 1 396 283 153 17 chr17 366888 367065 -89137488 - MIR SINE MIR -53 209 9 927 259 59 96 chr17 367072 367562 -89136991 + L2 LINE L2 2399 2870 -444 256 318 110 9 chr17 367881 368198 -89136355 + L2 LINE L2 2887 3307 -6 345 300 135 42 chr17 368206 368466 -89136087 + L2 LINE L2 2939 3222 -50 1169 171 0 0 chr17 368601 368788 -89135765 + AluJo SINE Alu 1 187 -125 2067 112 10 0 chr17 371907 372210 -89132343 - AluSx SINE Alu -6 306 1 259 315 136 0 chr17 372631 372759 -89131794 - MIR SINE MIR -58 150 38 508 271 91 89 chr17 372963 373324 -89131229 - L2 LINE L2 -1 3271 2910 803 159 0 0 chr17 373837 373963 -89130590 - FLAM_C SINE Alu -16 127 2 2143 188 124 8 chr17 373965 374507 -89130046 - L1MC4a LINE L1 -289 7519 6940 1491 172 39 26 chr17 374513 374821 -89129732 + AluJb SINE Alu 1 312 0 1136 122 13 258 chr17 377195 377738 -89126815 + L1MC4 LINE L1 7491 7900 -142 1112 165 37 0 chr17 377743 377931 -89126622 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 377931 377974 -89126579 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 242 172 52 0 chr17 377974 378032 -89126521 + A-rich Low_complexity Low_complexity 5 65 0 467 203 0 3 chr17 378070 378165 -89126388 + L1MC4 LINE L1 7889 8040 -2 408 40 0 0 chr17 378175 378225 -89126328 + (TCTCCC)n Simple_repeat Simple_repeat 6 55 0 287 149 0 0 chr17 378347 378394 -89126159 - AluSp SINE Alu -128 175 129 * 363 137 0 0 chr17 378393 378444 -89126109 - AluSp SINE Alu -124 179 129 262 128 85 0 chr17 378443 378490 -89126063 - AluJ/F(R)AM SINE Alu -123 179 129 * 293 200 20 0 chr17 378489 378539 -89126014 - AluSc SINE Alu -122 177 127 * 354 137 0 0 chr17 378538 378589 -89125964 - AluSc SINE Alu -122 177 127 251 149 85 0 chr17 378588 378635 -89125918 - AluYb8 SINE Alu -130 178 128 * 267 200 20 0 chr17 378634 378684 -89125869 - AluJ/F(R)AM SINE Alu -123 179 129 * 316 62 83 0 chr17 378683 378731 -89125822 - AluY SINE Alu -123 178 127 279 89 89 0 chr17 378731 378776 -89125777 - AluY SINE Alu -125 176 128 * 304 160 20 0 chr17 378775 378825 -89125728 - AluJ/F(R)AM SINE Alu -123 179 129 * 367 98 0 0 chr17 378824 378875 -89125678 - AluSc SINE Alu -122 177 127 * 388 98 0 0 chr17 378874 378925 -89125628 - AluJ/F(R)AM SINE Alu -123 179 129 341 120 20 0 chr17 378924 378974 -89125579 - AluJ/F(R)AM SINE Alu -123 179 129 * 276 106 85 0 chr17 378973 379020 -89125533 - AluYa5 SINE Alu -123 178 128 * 273 106 85 0 chr17 379019 379066 -89125487 - AluY SINE Alu -123 178 128 * 279 200 20 0 chr17 379065 379115 -89125438 - AluJ/F(R)AM SINE Alu -123 179 129 * 371 98 0 0 chr17 379114 379165 -89125388 - AluJ/F(R)AM SINE Alu -123 179 129 371 209 13 50 chr17 379164 379364 -89125189 - AluJ/F(R)AM SINE Alu -123 179 129 356 118 0 0 chr17 379363 379414 -89125139 - AluSp SINE Alu -124 179 129 * 360 118 0 0 chr17 379413 379464 -89125089 - AluJ/F(R)AM SINE Alu -123 179 129 360 118 0 0 chr17 379463 379514 -89125039 - AluSc SINE Alu -122 177 127 329 143 0 0 chr17 379514 379563 -89124990 - AluSc SINE Alu -123 176 128 371 98 0 0 chr17 379563 379614 -89124939 - AluSc SINE Alu -122 177 127 346 102 0 0 chr17 379614 379663 -89124890 - AluSc SINE Alu -123 176 128 371 98 0 0 chr17 379663 379714 -89124839 - AluJ/F(R)AM SINE Alu -123 179 129 340 118 0 0 chr17 379713 379764 -89124789 - AluJ/F(R)AM SINE Alu -123 179 129 * 358 98 0 0 chr17 379763 379814 -89124739 - AluSc SINE Alu -122 177 127 548 93 0 0 chr17 380495 380570 -89123983 - Alu SINE Alu -9 300 226 956 158 0 6 chr17 380571 380729 -89123824 - AluSq SINE Alu -156 157 1 326 109 0 0 chr17 381034 381080 -89123473 - Alu SINE Alu -256 46 1 360 299 55 44 chr17 381093 381367 -89123186 - L1ME LINE L1 -302 5819 5543 330 257 50 7 chr17 381447 381587 -89122966 - L1ME LINE L1 -755 5391 5246 2181 97 3 10 chr17 381755 382065 -89122488 + AluSx SINE Alu 5 312 0 200 128 64 21 chr17 382271 382318 -89122235 + CT-rich Low_complexity Low_complexity 4 52 0 1372 107 62 9 chr17 382586 382810 -89121743 - AluJo SINE Alu -76 236 1 554 170 21 0 chr17 383708 383802 -89120751 + AluSg/x SINE Alu 208 303 -6 324 287 156 6 chr17 386723 386890 -89117663 - L1ME4a LINE L1 0 6121 5930 1418 242 53 37 chr17 386908 387395 -89117158 - L1MB7 LINE L1 -19 6165 5671 1429 208 40 9 chr17 389194 389516 -89115037 - L1ME4a LINE L1 -466 5718 5387 1716 72 0 0 chr17 389532 389753 -89114800 + AluSq SINE Alu 1 221 -92 7574 39 2 0 chr17 389886 391244 -89113309 - L1PA4 LINE L1 -1 6154 4795 26867 31 4 7 chr17 391244 394489 -89110064 + L1PA4 LINE L1 1575 4810 -1336 287 247 65 0 chr17 394502 394579 -89109974 - HsTC2 DNA Tc2 -546 1352 1271 712 258 117 11 chr17 394586 394869 -89109684 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 395107 395167 -89109386 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 395731 395756 -89108797 + AT_rich Low_complexity Low_complexity 1 25 0 763 212 0 91 chr17 395831 395858 -89108695 + L1MA10 LINE L1 6124 6152 -182 1979 118 3 7 chr17 395858 396169 -89108384 - AluSg SINE Alu 0 310 2 763 212 0 91 chr17 396169 396372 -89108181 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 396708 396749 -89107804 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1817 170 0 0 chr17 396843 397143 -89107410 + AluSx SINE Alu 1 300 -12 286 267 61 30 chr17 397337 397468 -89107085 + MIR SINE MIR 77 211 -51 1652 28 0 42 chr17 398296 398508 -89106045 + L1PA3 LINE L1 5953 6155 0 404 254 60 0 chr17 400109 400243 -89104310 + L1MD2 LINE L1 6206 6347 -12 798 168 32 32 chr17 400244 400434 -89104119 + HsTC2 DNA Tc2 1605 1794 -104 1881 103 3 88 chr17 401655 401975 -89102578 - AluSx SINE Alu -19 293 1 9672 31 14 154 chr17 402055 403656 -89100897 + SVA Other Other 7 1383 -3 200 241 148 111 chr17 404203 404419 -89100134 - MIR SINE MIR -37 225 2 1757 172 7 0 chr17 405096 405399 -89099154 + AluJb SINE Alu 1 305 -7 1909 134 0 19 chr17 407762 408076 -89096477 - AluSx SINE Alu -4 308 1 1668 168 7 10 chr17 408076 408372 -89096181 - AluJb SINE Alu -17 295 1 25 51 0 0 chr17 408415 408454 -89096099 + AT_rich Low_complexity Low_complexity 1 39 0 350 171 66 0 chr17 408481 408557 -89095996 - L1MB8 LINE L1 -2 6176 6096 2657 181 18 30 chr17 408577 409146 -89095407 - L1MB4 LINE L1 -12 6168 5607 2103 94 23 3 chr17 410420 410719 -89093834 - AluSx SINE Alu -7 305 1 339 273 104 50 chr17 411209 411437 -89093116 - MIR SINE MIR -19 243 23 2414 68 0 0 chr17 413069 413380 -89091173 - AluY SINE Alu 0 311 1 226 228 140 0 chr17 413487 413544 -89091009 + L2 LINE L2 3207 3271 -1 374 159 29 14 chr17 413815 413884 -89090669 - MLT1K LTR MaLR -8 580 511 333 0 0 0 chr17 413998 414035 -89090518 + (GA)n Simple_repeat Simple_repeat 2 38 0 387 0 0 0 chr17 414058 414101 -89090452 + (TG)n Simple_repeat Simple_repeat 2 44 0 1887 100 59 0 chr17 414234 414504 -89090049 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 414645 414799 -89089754 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 414831 414931 -89089622 + CT-rich Low_complexity Low_complexity 2 102 0 1912 143 13 0 chr17 414954 415262 -89089291 - AluSx SINE Alu 0 312 1 2286 96 0 0 chr17 416296 416599 -89087954 - AluSc SINE Alu -6 303 1 1702 163 10 10 chr17 416602 416896 -89087657 - AluSx SINE Alu -14 298 5 253 188 125 0 chr17 417931 417995 -89086558 + MER94 DNA DNA 4 75 -59 2204 119 6 26 chr17 418141 418485 -89086068 - MER1B DNA MER1_type 0 337 1 249 260 185 17 chr17 418741 418914 -89085639 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 418916 419153 -89085400 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 419177 419281 -89085272 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 419281 419518 -89085035 - AluSg SINE Alu -19 291 56 2235 98 0 0 chr17 419523 419829 -89084724 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 419829 420189 -89084364 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 420193 420488 -89084065 - AluSq SINE Alu -17 296 1 1130 233 32 0 chr17 420488 420737 -89083816 - MSTD-int LTR MaLR -1477 258 2 1166 194 85 62 chr17 420737 421191 -89083362 - MSTD LTR MaLR -2 426 1 768 311 81 58 chr17 421258 421833 -89082720 + L2 LINE L2 2370 2981 -332 2293 78 0 0 chr17 421833 422127 -89082426 + AluY SINE Alu 1 294 -17 768 311 81 58 chr17 422127 422467 -89082086 + L2 LINE L2 2981 3312 -1 1763 148 18 0 chr17 422993 423277 -89081276 - AluJb SINE Alu -13 299 11 309 26 0 0 chr17 423286 423324 -89081229 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 42718 59 4 4 chr17 425782 431488 -89073065 - L1P2 LINE L1 -439 5715 11 313 285 40 99 chr17 431540 431691 -89072862 + MIR3 SINE MIR 56 197 -11 2287 88 0 3 chr17 431799 432105 -89072448 - AluSq SINE Alu -8 305 1 1625 156 0 8 chr17 432444 432700 -89071853 - AluJb SINE Alu -54 258 5 1650 182 7 0 chr17 435095 435392 -89069161 - AluJb SINE Alu -13 299 1 292 194 0 0 chr17 435658 435720 -89068833 + L1MA3 LINE L1 5104 5165 -981 519 118 24 0 chr17 435774 435859 -89068694 - L1M LINE L1 -784 5396 5310 2093 181 37 18 chr17 437244 437698 -89066855 + L1MA3 LINE L1 5838 6300 -5 1269 172 38 34 chr17 437814 438105 -89066448 - AluJo SINE Alu -20 292 1 189 94 0 0 chr17 439747 439779 -89064774 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2069 90 11 0 chr17 439782 440060 -89064493 - AluSp SINE Alu -32 281 1 279 0 0 0 chr17 440225 440256 -89064297 + (TG)n Simple_repeat Simple_repeat 1 31 0 2202 92 0 19 chr17 440273 440590 -89063963 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 442267 442289 -89062264 + (TG)n Simple_repeat Simple_repeat 1 22 0 2007 90 14 4 chr17 442289 442568 -89061985 - AluSq SINE Alu -31 282 1 183 216 0 0 chr17 443297 443334 -89061219 + L2 LINE L2 3232 3268 -4 1654 166 7 24 chr17 443380 443676 -89060877 - AluSx SINE Alu -21 291 1 1347 143 4 30 chr17 443841 444071 -89060482 - AluJo SINE Alu -16 296 73 1151 211 12 37 chr17 444326 444568 -89059985 - L1MC1 LINE L1 0 6333 6098 946 168 0 6 chr17 444572 444733 -89059820 - FAM SINE Alu -10 175 16 1793 170 10 3 chr17 444775 445081 -89059472 + AluJb SINE Alu 1 308 -4 273 151 0 0 chr17 445089 445142 -89059411 + GA-rich Low_complexity Low_complexity 4 56 0 2099 95 7 14 chr17 445665 445961 -89058592 - AluSg SINE Alu -16 294 1 2066 100 0 27 chr17 446442 446742 -89057811 - AluSq SINE Alu -21 292 1 21 0 0 0 chr17 446875 446896 -89057657 + AT_rich Low_complexity Low_complexity 1 21 0 1171 233 129 20 chr17 446901 447249 -89057304 - L1ME3A LINE L1 -10 6160 5775 918 227 21 5 chr17 447258 447452 -89057101 - MER58A DNA MER1_type 0 224 28 1838 137 10 3 chr17 447811 448117 -89056436 - AluSx SINE Alu -4 308 1 1603 166 7 0 chr17 448270 448541 -89056012 - AluJo SINE Alu 0 312 40 1897 149 0 0 chr17 448552 448840 -89055713 - AluSx SINE Alu -12 300 13 1000 128 12 6 chr17 450048 450212 -89054341 + AluSg/x SINE Alu 137 301 -9 1790 148 3 10 chr17 451152 451450 -89053103 + AluJb SINE Alu 1 296 -16 214 356 53 53 chr17 451485 451693 -89052860 + L2 LINE L2 2845 3052 -220 318 244 61 0 chr17 451715 451797 -89052756 - MIR3 SINE MIR -8 200 114 376 189 4 7 chr17 451999 452235 -89052318 + AluJo SINE Alu 1 299 -3 1342 172 29 44 chr17 453281 453554 -89050999 - AluJo SINE Alu -32 280 12 1461 145 4 0 chr17 453565 453792 -89050761 - MER44D DNA MER2_type -1 604 322 2112 113 7 0 chr17 453849 454151 -89050402 - AluSg SINE Alu -6 304 1 1095 53 0 0 chr17 454152 454284 -89050269 - AluSg SINE Alu -178 132 1 1460 198 12 1 chr17 455004 455493 -89049060 - MER44D DNA MER2_type -1 604 1 1412 258 112 38 chr17 455512 456019 -89048534 - L3 LINE CR1 -23 1554 1010 405 252 72 9 chr17 456268 456379 -89048174 - L3 LINE CR1 -553 1024 907 806 291 84 7 chr17 456379 456664 -89047889 - MER102b DNA MER1_type 0 341 35 527 316 163 14 chr17 456670 456952 -89047601 - L3 LINE CR1 -664 913 590 189 320 90 58 chr17 457017 457173 -89047380 + MIR SINE MIR 82 242 -20 2139 126 0 0 chr17 457231 457540 -89047013 + AluSx SINE Alu 1 309 -3 741 223 66 18 chr17 457540 457696 -89046857 + AluJo SINE Alu 134 300 -12 2014 124 101 20 chr17 458516 458863 -89045690 - THE1C LTR MaLR 0 375 1 406 207 256 0 chr17 459107 459228 -89045325 + MIR SINE MIR 49 200 -62 1662 162 13 26 chr17 459250 459413 -89045140 - AluJo SINE Alu -13 299 135 2064 105 3 3 chr17 459413 459709 -89044844 - AluSc SINE Alu -13 296 1 2074 109 0 3 chr17 459709 460001 -89044552 - AluSx SINE Alu -20 292 1 1662 162 13 26 chr17 460001 460139 -89044414 - AluJo SINE Alu -175 137 1 1652 191 7 10 chr17 460663 460967 -89043586 - AluJo SINE Alu -9 303 1 1268 191 29 51 chr17 460969 461283 -89043270 - AluJo SINE Alu -2 310 4 1952 164 11 35 chr17 461306 461678 -89042875 - MER47A DNA MER2_type 0 366 4 2082 106 3 7 chr17 461996 462299 -89042254 - AluSq SINE Alu -11 302 1 1583 240 108 14 chr17 462324 462824 -89041729 - L1M4 LINE L1 -1526 4620 4074 275 102 61 0 chr17 462825 462874 -89041679 - L1MCc LINE L1 -4151 2971 2920 333 255 59 93 chr17 462884 463088 -89041465 - L1MCc LINE L1 -4329 2793 2597 33 0 0 0 chr17 463096 463129 -89041424 + AT_rich Low_complexity Low_complexity 1 33 0 776 181 0 8 chr17 463154 463287 -89041266 - FLAM_A SINE Alu -1 132 1 285 294 46 0 chr17 463319 463428 -89041125 - L1MA9 LINE L1 -38 6274 6161 * 749 251 44 36 chr17 463423 463698 -89040855 - L1MCc LINE L1 -4614 2508 2232 * 1106 226 46 77 chr17 463693 464323 -89040230 - L1MCc LINE L1 -4887 1536 1278 1023 261 71 25 chr17 464321 464715 -89039838 - L1MCc LINE L1 -5995 428 17 * 712 167 7 211 chr17 464715 465009 -89039544 + Charlie1 DNA MER1_type 2187 2420 -341 1474 219 40 26 chr17 465012 465359 -89039194 + MLT1A1 LTR MaLR 12 363 -2 1645 181 35 84 chr17 465362 465569 -89038984 + Charlie1 DNA MER1_type 2329 2544 -217 1986 120 0 0 chr17 465569 465853 -89038700 + AluSg SINE Alu 1 284 -26 188 35 35 0 chr17 465857 465886 -89038667 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1645 181 35 84 chr17 465886 466127 -89038426 + Charlie1 DNA MER1_type 2547 2760 -1 418 281 35 9 chr17 466209 466323 -89038230 - L2 LINE L2 0 3313 3197 233 270 120 41 chr17 466411 466678 -89037875 - L1M4 LINE L1 -2202 3944 3657 2188 110 0 0 chr17 466691 466992 -89037561 - AluSx SINE Alu -11 301 1 1180 62 0 7 chr17 466992 467138 -89037415 - AluSq/x SINE Alu -168 145 1 2189 92 0 3 chr17 467465 467771 -89036782 - AluSc SINE Alu -4 305 1 763 131 0 0 chr17 468098 468205 -89036348 - AluSq/x SINE Alu -203 109 3 906 191 153 0 chr17 468215 468477 -89036076 - L1M4 LINE L1 -869 5277 4976 468 0 0 0 chr17 468661 468713 -89035840 + (TG)n Simple_repeat Simple_repeat 1 52 0 2169 39 11 18 chr17 468713 468993 -89035560 - AluY SINE Alu -33 278 1 190 89 67 22 chr17 469028 469073 -89035480 + CT-rich Low_complexity Low_complexity 4 50 0 2187 185 102 20 chr17 469333 469831 -89034722 + L1MB7 LINE L1 5627 6165 -19 1528 210 13 3 chr17 469928 470237 -89034316 + AluJo SINE Alu 1 312 0 405 0 0 0 chr17 471687 471732 -89032821 + (GA)n Simple_repeat Simple_repeat 2 46 0 423 0 0 0 chr17 471755 471802 -89032751 + (TG)n Simple_repeat Simple_repeat 2 48 0 1872 104 59 0 chr17 471935 472205 -89032348 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 472346 472500 -89032053 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 472532 472632 -89031921 + CT-rich Low_complexity Low_complexity 2 102 0 1833 147 16 0 chr17 472661 472967 -89031586 - AluSx SINE Alu -1 311 1 2286 96 0 0 chr17 473986 474289 -89030264 - AluSc SINE Alu -6 303 1 1771 157 10 10 chr17 474292 474591 -89029962 - AluSx SINE Alu -9 303 5 253 188 125 0 chr17 475626 475690 -89028863 + MER94 DNA DNA 4 75 -59 2215 116 6 26 chr17 475836 476180 -89028373 - MER1B DNA MER1_type 0 337 1 243 259 184 23 chr17 476435 476609 -89027944 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 476611 476848 -89027705 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 476872 476976 -89027577 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 476976 477213 -89027340 - AluSg SINE Alu -19 291 56 2182 108 0 0 chr17 477218 477524 -89027029 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 477524 477884 -89026669 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 477888 478183 -89026370 - AluSq SINE Alu -17 296 1 1157 225 32 0 chr17 478183 478432 -89026121 - MSTD-int LTR MaLR -1477 258 2 1166 191 82 59 chr17 478432 478886 -89025667 - MSTD LTR MaLR -2 426 1 789 311 82 58 chr17 478953 479528 -89025025 + L2 LINE L2 2370 2983 -330 2306 75 0 0 chr17 479528 479822 -89024731 + AluY SINE Alu 1 294 -17 789 311 82 58 chr17 479822 480161 -89024392 + L2 LINE L2 2983 3312 -1 1749 151 18 0 chr17 480687 480971 -89023582 - AluJb SINE Alu -13 299 11 306 0 0 0 chr17 480980 481014 -89023539 + (CCTG)n Simple_repeat Simple_repeat 2 35 0 934 129 24 0 chr17 481016 481186 -89023367 + CT-rich Low_complexity Low_complexity 4 177 0 186 43 0 0 chr17 481187 481210 -89023343 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2106 91 0 0 chr17 481210 481486 -89023067 - AluY SINE Alu -35 276 1 216 0 0 0 chr17 482325 482349 -89022204 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2306 70 0 7 chr17 482356 482656 -89021897 - AluSc SINE Alu -11 298 1 410 257 114 0 chr17 483033 483138 -89021415 + MIR SINE MIR 110 226 -36 675 227 28 90 chr17 483531 483781 -89020772 - MIR SINE MIR -14 248 23 1941 110 11 0 chr17 484315 484624 -89019929 + AluSx SINE Alu 1 312 0 23 0 0 0 chr17 484777 484800 -89019753 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr17 487116 487141 -89017412 + (CA)n Simple_repeat Simple_repeat 2 26 0 2463 48 3 0 chr17 489089 489399 -89015154 - AluY SINE Alu 0 311 1 1933 119 0 0 chr17 489644 489938 -89014615 - AluY SINE Alu -13 298 5 245 116 23 0 chr17 489938 489981 -89014572 - Alu SINE Alu -259 44 1 1871 197 217 12 chr17 491067 491560 -89012993 - MLT1G1 LTR MaLR 0 595 2 2095 97 28 0 chr17 491560 491849 -89012704 + AluSx SINE Alu 1 297 -15 1132 180 0 9 chr17 492264 492475 -89012078 - AluJo SINE Alu -30 282 74 344 268 212 45 chr17 492976 493337 -89011216 - L1ME LINE L1 -348 5822 5394 1807 159 0 7 chr17 493341 493642 -89010911 - AluJo SINE Alu -13 299 1 456 282 33 74 chr17 493658 494048 -89010505 - L1MEd LINE L1 -1173 1317 895 2123 113 0 10 chr17 494666 494976 -89009577 - AluSx SINE Alu -5 307 1 1129 184 0 10 chr17 495499 495706 -89008847 - AluJo SINE Alu -107 205 1 456 282 33 74 chr17 495722 496112 -89008441 - L1MEd LINE L1 -1173 1317 895 1996 125 0 13 chr17 497508 497819 -89006734 - AluSx SINE Alu -5 307 1 319 341 77 18 chr17 498630 498800 -89005753 - L2 LINE L2 -1 3312 3133 923 223 23 11 chr17 501517 501782 -89002771 + L1M4 LINE L1 4986 5253 -893 8802 26 0 1 chr17 552020 553039 -88951514 + L1P LINE L1 3793 4810 -1336 287 247 65 0 chr17 553052 553129 -88951424 - HsTC2 DNA Tc2 -546 1352 1271 712 258 117 11 chr17 553136 553419 -88951134 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 553657 553717 -88950836 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 554283 554308 -88950245 + AT_rich Low_complexity Low_complexity 1 25 0 776 208 0 91 chr17 554383 554410 -88950143 + L1MA10 LINE L1 6124 6152 -182 2009 114 3 7 chr17 554410 554721 -88949832 - AluSg SINE Alu 0 310 2 776 208 0 91 chr17 554721 554924 -88949629 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 555260 555301 -88949252 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1864 163 0 0 chr17 555395 555695 -88948858 + AluSx SINE Alu 1 300 -12 286 267 61 30 chr17 555889 556020 -88948533 + MIR SINE MIR 77 211 -51 2576 183 170 58 chr17 556851 557110 -88947443 - L1MC4a LINE L1 -1 7807 7578 1470 169 55 0 chr17 557110 557383 -88947170 - AluJo SINE Alu -24 288 1 2576 183 170 58 chr17 557383 557926 -88946627 - L1MC4a LINE L1 -230 7578 6940 1491 172 39 26 chr17 557932 558240 -88946313 + AluJb SINE Alu 1 312 0 1757 172 7 0 chr17 567972 568275 -88936278 - AluJb SINE Alu -7 305 1 200 241 148 111 chr17 568952 569168 -88935385 + MIR SINE MIR 2 225 -37 10368 29 8 106 chr17 569715 571247 -88933306 - SVA Other Other -3 1383 2 321 26 0 0 chr17 571251 571289 -88933264 + (GGGAGA)n Simple_repeat Simple_repeat 6 43 0 467 203 0 3 chr17 571299 571394 -88933159 - L1MC4 LINE L1 -2 8040 7889 221 190 52 0 chr17 571432 571490 -88933063 + T-rich Low_complexity Low_complexity 5 65 0 291 93 0 0 chr17 571490 571533 -88933020 + (TCCCC)n Simple_repeat Simple_repeat 1 43 0 1133 160 37 0 chr17 571533 571721 -88932832 - AluJb SINE Alu -117 195 1 753 165 49 18 chr17 571726 571890 -88932663 - L1MC4 LINE L1 -142 7900 7732 * 2693 166 80 219 chr17 571889 572359 -88932194 - L1MC4 LINE L1 -234 7808 7274 2116 108 3 19 chr17 572359 572673 -88931880 - AluSq SINE Alu -4 309 1 2693 166 80 219 chr17 572673 572831 -88931722 - L1MC4 LINE L1 -768 7274 7096 1935 114 59 7 chr17 572831 573121 -88931432 - AluSx SINE Alu -7 305 1 2693 166 80 219 chr17 573121 574057 -88930496 - L1MC4 LINE L1 -946 7096 6461 1728 157 33 17 chr17 574211 574511 -88930042 + AluJb SINE Alu 1 305 -7 267 31 0 0 chr17 574837 574869 -88929684 + (TCCCC)n Simple_repeat Simple_repeat 5 36 0 1104 194 0 9 chr17 574871 575087 -88929466 - AluJo SINE Alu -32 280 67 1103 151 0 0 chr17 575091 575257 -88929296 + AluJb SINE Alu 135 300 -12 2113 98 3 19 chr17 575713 576028 -88928525 + AluSg SINE Alu 1 310 0 393 264 42 35 chr17 576375 576519 -88928034 + MER117 DNA MER1_type 19 163 -34 2714 10 0 3 chr17 576527 576836 -88927717 - AluYa5 SINE Alu -3 308 1 2285 96 0 3 chr17 577324 577638 -88926915 - AluSp SINE Alu 0 313 1 1887 104 3 68 chr17 578016 578196 -88926357 - AluSx SINE Alu -7 305 154 2178 89 13 13 chr17 578196 578499 -88926054 - AluY SINE Alu -8 303 1 1887 104 3 68 chr17 578499 578644 -88925909 - AluSx SINE Alu -158 154 1 1112 82 0 0 chr17 578644 578790 -88925763 - AluSq/x SINE Alu -166 146 1 694 309 35 43 chr17 578984 579160 -88925393 + MIR SINE MIR 8 183 -79 2089 111 6 16 chr17 579160 579475 -88925078 + AluSx SINE Alu 1 312 0 694 309 35 43 chr17 579475 579554 -88924999 + MIR SINE MIR 183 261 -1 205 227 303 0 chr17 579627 579693 -88924860 + MIR SINE MIR 50 135 -73 1642 128 0 8 chr17 580864 581137 -88923416 + AluSx SINE Alu 39 309 0 357 298 66 50 chr17 581142 581323 -88923230 - L1ME4a LINE L1 -92 6029 5846 399 302 114 0 chr17 581323 581472 -88923081 - LTR33 LTR ERVL 0 521 356 242 267 44 0 chr17 583468 583558 -88920995 - L1ME4a LINE L1 -73 6048 5955 1852 119 0 41 chr17 583739 584054 -88920499 - AluSg SINE Alu 0 303 1 2037 103 0 3 chr17 584109 584399 -88920154 - AluY SINE Alu -15 296 8 1364 92 0 0 chr17 584399 584572 -88919981 - AluY SINE Alu -138 173 1 1951 158 0 0 chr17 584598 584902 -88919651 + AluJo SINE Alu 1 304 -8 885 208 35 10 chr17 585066 585268 -88919285 + L1MC5 LINE L1 6660 6866 -1095 960 223 83 55 chr17 585277 585604 -88918949 + MLT1C LTR MaLR 6 341 -126 1088 94 0 13 chr17 585609 585758 -88918795 + AluSq/x SINE Alu 5 151 -161 512 275 69 72 chr17 585788 586093 -88918460 + L2 LINE L2 3009 3312 -1 631 174 144 0 chr17 586095 586227 -88918326 - MSTD LTR MaLR -243 153 3 659 152 67 42 chr17 586257 586422 -88918131 - L1MC3 LINE L1 0 7785 7617 1373 159 41 44 chr17 586466 586761 -88917792 - AluJo SINE Alu -18 294 1 951 222 40 48 chr17 586772 587123 -88917430 - L1MC5 LINE L1 -453 7508 7161 1393 82 0 16 chr17 587123 587317 -88917236 + AluSx SINE Alu 1 191 -121 341 49 0 0 chr17 587319 587360 -88917193 + AluSg SINE Alu 59 99 -201 500 290 98 59 chr17 587446 587701 -88916852 - L2 LINE L2 -348 2966 2702 308 273 45 18 chr17 587726 587836 -88916717 + L2 LINE L2 3201 3313 0 332 248 149 12 chr17 587841 588002 -88916551 - L1ME4a LINE L1 -406 5715 5533 1942 100 3 65 chr17 588037 588346 -88916207 + AluSq SINE Alu 3 292 -21 362 282 32 16 chr17 588474 588598 -88915955 + L2 LINE L2 3173 3298 -15 479 222 296 15 chr17 588738 588888 -88915665 + MIR SINE MIR 3 110 -152 2129 98 24 0 chr17 588888 589183 -88915370 + AluSq SINE Alu 1 302 -11 479 222 296 15 chr17 589183 589235 -88915318 + MIR SINE MIR 110 262 0 1565 187 3 3 chr17 591173 591473 -88913080 - AluJo SINE Alu -12 300 1 1168 192 18 39 chr17 592172 592401 -88912152 + MER58A DNA MER1_type 1 224 0 341 292 119 40 chr17 592477 592703 -88911850 + MIR SINE MIR 13 256 -6 199 336 65 42 chr17 594557 594774 -88909779 + L2 LINE L2 2807 3028 -244 4120 191 65 37 chr17 594792 594842 -88909711 - L1MB7 LINE L1 -21 6163 6116 1467 170 83 4 chr17 594842 595119 -88909434 + AluSx SINE Alu 1 299 -13 4120 191 65 37 chr17 595119 595581 -88908972 - L1MB7 LINE L1 -68 6116 5668 2308 85 0 7 chr17 595581 595887 -88908666 + AluSx SINE Alu 1 304 -8 4120 191 65 37 chr17 595887 596381 -88908172 - L1MB7 LINE L1 -516 5668 5189 423 0 0 0 chr17 596381 596428 -88908125 + (TG)n Simple_repeat Simple_repeat 1 47 0 4120 191 65 37 chr17 596428 596881 -88907672 - L1MB7 LINE L1 -995 5189 4660 180 336 126 17 chr17 596947 597066 -88907487 + L2 LINE L2 3098 3229 -43 1639 169 0 4 chr17 597688 597960 -88906593 - AluJo SINE Alu -41 271 1 357 275 181 7 chr17 597999 598148 -88906405 - MIR SINE MIR -1 261 87 491 198 0 0 chr17 598152 598233 -88906320 + AluJb SINE Alu 168 248 -64 227 240 0 0 chr17 598287 598337 -88906216 - MIR SINE MIR -122 140 91 312 165 0 26 chr17 598347 598412 -88906141 - Alu SINE Alu -250 53 1 875 91 0 57 chr17 598699 598943 -88905610 + (TCCC)n Simple_repeat Simple_repeat 1 230 0 307 77 0 0 chr17 598943 598982 -88905571 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 209 333 33 0 chr17 598988 599048 -88905505 - MIR SINE MIR -110 98 37 2113 114 10 3 chr17 599764 600062 -88904491 - AluSx SINE Alu -12 300 1 509 301 94 18 chr17 600198 600436 -88904117 - MIR SINE MIR 0 262 7 210 290 67 104 chr17 600446 600639 -88903914 + MIR SINE MIR 67 252 -10 186 250 0 0 chr17 600756 600792 -88903761 + L2 LINE L2 3262 3297 -16 194 289 0 0 chr17 600796 600841 -88903712 + L2 LINE L2 3262 3306 -7 223 244 0 0 chr17 601307 601352 -88903201 + L2 LINE L2 3262 3306 -7 1894 138 12 66 chr17 602253 602572 -88901981 + AluJo SINE Alu 1 302 -10 223 328 74 33 chr17 602843 602965 -88901588 + MIR SINE MIR 77 203 -59 690 162 0 0 chr17 603084 603195 -88901358 - AluJb SINE Alu -55 257 147 305 240 221 0 chr17 604009 604113 -88900440 + MIR3 SINE MIR 78 204 -4 354 258 164 25 chr17 604924 605083 -88899470 - L1MC5 LINE L1 -37 7924 7744 1140 199 83 15 chr17 605768 606034 -88898519 - L1MC1 LINE L1 -1 6332 6049 1978 167 0 0 chr17 607823 608122 -88896431 - AluJo SINE Alu -13 299 1 2330 105 0 0 chr17 608618 608914 -88895639 + AluSx SINE Alu 1 296 -16 198 387 108 35 chr17 608921 609345 -88895208 - L2 LINE L2 -4 3268 2814 872 189 44 0 chr17 609349 609508 -88895045 + AluJo SINE Alu 1 166 -146 244 283 168 0 chr17 610078 610191 -88894362 - L2 LINE L2 0 3313 3182 1986 117 53 17 chr17 610199 610499 -88894054 + AluSx SINE Alu 1 311 -1 2485 72 13 3 chr17 610510 610815 -88893738 + AluSq SINE Alu 1 308 -5 1274 102 17 11 chr17 610815 610991 -88893562 + AluSg/x SINE Alu 134 310 -2 1184 194 53 30 chr17 610989 611252 -88893301 + AluJb SINE Alu 27 295 -17 * 1894 237 43 124 chr17 612058 612305 -88892248 + L1MB7 LINE L1 4052 4317 -1829 2149 101 13 44 chr17 612305 612623 -88891930 + AluSg SINE Alu 1 308 -2 1894 237 43 124 chr17 612623 612720 -88891833 + L1MB7 LINE L1 4317 4420 -1726 1243 152 108 50 chr17 612720 612997 -88891556 - AluJo SINE Alu -19 293 1 1894 237 43 124 chr17 612997 613176 -88891377 + L1MB7 LINE L1 4420 4612 -1534 244 191 0 0 chr17 613176 613218 -88891335 + MER57A LTR ERV1 295 336 -67 1894 237 43 124 chr17 613218 613334 -88891219 + L1MB7 LINE L1 4612 4736 -1410 318 26 0 0 chr17 613334 613373 -88891180 + (TG)n Simple_repeat Simple_repeat 1 39 0 1894 237 43 124 chr17 613373 613711 -88890842 + L1MB7 LINE L1 4736 4966 -1180 3583 139 42 6 chr17 613711 613860 -88890693 + L1MB7 LINE L1 5504 5646 -538 2292 114 3 13 chr17 613860 614175 -88890378 + AluSx SINE Alu 1 312 0 3583 139 42 6 chr17 614175 614664 -88889889 + L1MB7 LINE L1 5646 6165 -19 1894 237 43 124 chr17 614664 614830 -88889723 + L1MB7 LINE L1 4966 5144 -1002 1891 163 11 3 chr17 614846 615129 -88889424 + AluJo SINE Alu 1 285 -27 1046 208 42 17 chr17 615139 615375 -88889178 + L1ME3 LINE L1 5472 5713 -449 252 349 84 19 chr17 615490 615705 -88888848 + L1ME3 LINE L1 5928 6156 -6 2297 118 3 0 chr17 616737 617042 -88887511 - AluSx SINE Alu -6 306 1 1819 186 0 16 chr17 617044 617351 -88887202 - AluJo SINE Alu -10 302 1 635 282 48 97 chr17 617416 618262 -88886291 - L1ME3A LINE L1 -213 5951 5268 2048 81 102 18 chr17 618453 618737 -88885816 - AluSx SINE Alu 0 312 5 215 296 56 28 chr17 619829 619937 -88884616 + MIR SINE MIR 91 201 -61 309 336 73 0 chr17 620083 620193 -88884360 + L1ME4a LINE L1 5393 5510 -611 267 188 0 0 chr17 620298 620346 -88884207 - FAM SINE Alu -12 167 120 276 257 122 68 chr17 620411 620491 -88884062 + L1ME4a LINE L1 5869 5943 -178 1850 156 0 14 chr17 620491 620786 -88883767 - AluJb SINE Alu -21 291 1 276 257 122 68 chr17 620786 620942 -88883611 + L1ME4a LINE L1 5943 6118 -3 228 344 27 0 chr17 622460 622580 -88881973 + MER5A DNA MER1_type 47 173 -5 207 273 0 57 chr17 623199 623287 -88881266 + CT-rich Low_complexity Low_complexity 1 83 0 1388 70 12 0 chr17 623964 624135 -88880418 - AluSg/x SINE Alu -3 307 135 1281 168 48 0 chr17 624688 624897 -88879656 + AluJo SINE Alu 2 220 -92 2167 111 0 3 chr17 624937 625225 -88879328 + AluSx SINE Alu 1 287 -25 329 287 66 12 chr17 626035 626096 -88878457 - MER5B DNA MER1_type -2 176 120 2148 103 14 3 chr17 626096 626388 -88878165 + AluSc SINE Alu 1 295 -14 329 287 66 12 chr17 626388 626493 -88878060 - MER5B DNA MER1_type -58 120 1 2060 97 10 33 chr17 626654 626953 -88877600 + AluSx SINE Alu 1 292 -20 823 147 0 16 chr17 627098 627227 -88877326 + AluJo/FLAM SINE Alu 1 127 -185 2184 114 10 0 chr17 627227 627524 -88877029 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr17 629315 629338 -88875215 + AT_rich Low_complexity Low_complexity 1 23 0 209 193 0 18 chr17 630954 631011 -88873542 + CT-rich Low_complexity Low_complexity 2 57 0 237 254 15 0 chr17 632171 632238 -88872315 - MIR SINE MIR -141 121 54 1192 179 0 9 chr17 634515 634733 -88869820 - MER46A DNA MER2_type 0 236 21 193 250 50 0 chr17 635717 635777 -88868776 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 635977 636037 -88868516 + L2 LINE L2 1846 1908 -1406 183 267 50 0 chr17 636172 636232 -88868321 + L2 LINE L2 1846 1908 -1406 193 250 50 0 chr17 636367 636427 -88868126 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636497 636557 -88867996 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636627 636687 -88867866 + L2 LINE L2 1846 1908 -1406 183 267 50 0 chr17 636822 636882 -88867671 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636952 637012 -88867541 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 637147 637207 -88867346 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 637667 637727 -88866826 + L2 LINE L2 1846 1908 -1406 1059 109 24 6 chr17 638374 638539 -88866014 + Tigger5 DNA MER2_type 2156 2323 0 843 136 0 0 chr17 639118 639291 -88865262 - FLAM_C SINE Alu 0 174 2 2203 107 3 7 chr17 639941 640240 -88864313 + AluSg SINE Alu 1 298 -12 1050 130 62 0 chr17 640240 640402 -88864151 + AluSg/x SINE Alu 134 305 -7 365 225 85 70 chr17 640541 640670 -88863883 + MER8 DNA MER2_type 49 179 -60 281 297 0 0 chr17 640645 640709 -88863844 + MER2 DNA MER2_type 282 345 0 * 2294 86 3 13 chr17 640797 641099 -88863454 - AluSx SINE Alu -13 299 1 1279 226 35 41 chr17 641118 641485 -88863068 + MLT1A1 LTR MaLR 1 365 0 1928 139 35 3 chr17 641646 641933 -88862620 + AluJb SINE Alu 1 296 -16 2461 82 0 0 chr17 641972 642275 -88862278 + AluY SINE Alu 1 303 -8 2069 128 3 0 chr17 643427 643709 -88860844 + AluSx SINE Alu 1 283 -29 180 0 0 0 chr17 643709 643729 -88860824 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2134 118 17 0 chr17 643738 644027 -88860526 + AluSq SINE Alu 1 294 -19 189 132 38 19 chr17 644185 644238 -88860315 + CT-rich Low_complexity Low_complexity 1 54 0 * 210 118 0 0 chr17 644231 644265 -88860288 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1804 167 17 0 chr17 644265 644565 -88859988 - AluJb SINE Alu -7 305 1 1071 83 0 0 chr17 644567 644700 -88859853 - AluSq/x SINE Alu -179 133 1 2240 113 0 28 chr17 646166 646484 -88858069 + AluSq SINE Alu 5 313 0 721 185 52 0 chr17 646785 646920 -88857633 - FRAM SINE Alu -25 151 10 255 167 0 50 chr17 646945 647005 -88857548 - AluJ SINE Alu -116 186 130 935 124 0 28 chr17 647023 647168 -88857385 + FLAM_C SINE Alu 1 141 -2 21 36 0 0 chr17 647190 647218 -88857335 + AT_rich Low_complexity Low_complexity 1 28 0 1037 161 0 22 chr17 647231 647411 -88857142 + FRAM SINE Alu 1 176 0 812 158 0 0 chr17 647412 647532 -88857021 - AluJ SINE Alu -192 120 1 2062 66 0 0 chr17 648503 648745 -88855808 - AluSq SINE Alu -71 242 1 1876 124 9 73 chr17 648985 649300 -88855253 + AluSx SINE Alu 1 295 -17 482 88 0 0 chr17 649303 649371 -88855182 + Alu SINE Alu 11 78 -232 324 200 10 60 chr17 849372 849472 -88655081 + L1MC4a LINE L1 7328 7422 -386 * 1174 219 45 6 chr17 849445 849779 -88654774 + L1MD3 LINE L1 7648 7994 -1 2640 13 0 7 chr17 849971 850273 -88654280 + AluYb8 SINE Alu 1 300 -18 1486 152 7 65 chr17 850522 850812 -88653741 - AluJo SINE Alu -39 273 1 2350 79 10 0 chr17 850822 851126 -88653427 - AluSx SINE Alu -5 307 1 1954 120 3 17 chr17 851439 851606 -88652947 - AluJb SINE Alu -11 301 138 2162 105 3 7 chr17 851606 851911 -88652642 - AluY SINE Alu -7 304 1 1954 120 3 17 chr17 851911 852035 -88652518 - AluJb SINE Alu -174 138 14 2317 74 0 0 chr17 852285 852582 -88651971 + AluY SINE Alu 1 297 -14 2264 71 19 13 chr17 852742 852875 -88651678 + AluSx SINE Alu 1 132 -180 2071 110 3 16 chr17 852875 853183 -88651370 + AluSp SINE Alu 1 304 -9 2264 71 19 13 chr17 853183 853359 -88651194 + AluSx SINE Alu 132 312 0 2384 57 0 0 chr17 853606 853904 -88650649 + AluY SINE Alu 1 298 -13 1835 92 0 12 chr17 856181 856431 -88648122 - AluSq SINE Alu -66 247 1 711 235 9 68 chr17 856456 856677 -88647876 + L1ME3 LINE L1 5923 6130 -32 1854 173 3 3 chr17 856693 857005 -88647548 - AluJo SINE Alu 0 312 1 2840 98 176 12 chr17 857042 857465 -88647088 - LTR61 LTR ERV1 0 595 73 2499 58 0 3 chr17 857465 857777 -88646776 - AluY SINE Alu 0 311 1 2840 98 176 12 chr17 857777 857863 -88646690 - LTR61 LTR ERV1 -522 73 2 384 278 68 8 chr17 857864 857997 -88646556 - MIR SINE MIR -104 158 18 266 353 32 19 chr17 858473 858629 -88645924 - L2 LINE L2 -905 2409 2252 2124 96 0 0 chr17 858799 859080 -88645473 - AluSx SINE Alu -3 309 29 411 86 0 0 chr17 859184 859242 -88645311 + AluSp/q SINE Alu 242 299 -14 288 342 108 4 chr17 859243 859503 -88645050 + L1ME LINE L1 5551 5837 -284 985 82 8 0 chr17 859982 860116 -88644437 + AluSq/x SINE Alu 1 135 -178 2070 113 10 0 chr17 860116 860408 -88644145 + AluSx SINE Alu 1 295 -17 32 0 0 0 chr17 860408 860440 -88644113 + AT_rich Low_complexity Low_complexity 1 32 0 290 332 56 78 chr17 860733 861001 -88643552 + MIR SINE MIR 1 262 0 440 75 0 0 chr17 861347 861414 -88643139 - AluSp/q SINE Alu 0 313 247 2145 119 0 0 chr17 861577 861879 -88642674 + AluSx SINE Alu 1 302 -10 257 135 313 10 chr17 861879 861975 -88642578 - L1 LINE L1 -1415 4731 4607 4343 177 74 63 chr17 861976 862189 -88642364 - Tigger1 DNA MER2_type -1238 1180 971 2177 105 0 0 chr17 862189 862511 -88642042 - AluSx SINE Alu 0 322 1 4343 177 74 63 chr17 862511 863032 -88641521 - Tigger1 DNA MER2_type -1447 971 425 2072 98 21 0 chr17 863032 863319 -88641234 - AluSg SINE Alu -15 295 3 4343 177 74 63 chr17 863319 863749 -88640804 - Tigger1 DNA MER2_type -1993 425 1 2141 58 0 0 chr17 865145 865405 -88639148 + AluSx SINE Alu 37 296 -16 1422 140 81 4 chr17 865661 865896 -88638657 + AluJo SINE Alu 14 266 -46 2146 111 0 10 chr17 866072 866370 -88638183 + AluSx SINE Alu 1 295 -17 898 187 0 0 chr17 867119 867133 -88637420 - AluSq/x SINE Alu -163 150 137 1332 365 0 31 chr17 867133 867454 -88637099 - AluSx SINE Alu -1 311 1 898 187 0 0 chr17 867454 867589 -88636964 - AluSq/x SINE Alu -175 138 1 204 308 34 127 chr17 867629 867866 -88636687 - L2 LINE L2 -77 3195 2981 4944 54 24 1 chr17 871132 871801 -88632752 - LTR13 LTR ERVK -323 684 1 315 0 0 0 chr17 871809 871844 -88632709 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2118 93 0 20 chr17 872593 872895 -88631658 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 873331 873381 -88631172 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 873641 873795 -88630758 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 874101 874147 -88630406 + G-rich Low_complexity Low_complexity 6 51 0 223 230 30 40 chr17 874287 874387 -88630166 + (CCCG)n Simple_repeat Simple_repeat 2 100 0 587 304 134 0 chr17 874487 874704 -88629849 - MIR SINE MIR -15 247 2 288 0 0 0 chr17 874803 874835 -88629718 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1789 152 11 0 chr17 874837 875113 -88629440 - AluJb SINE Alu -33 279 1 2371 73 3 0 chr17 876754 877054 -88627499 - AluSp SINE Alu -11 302 2 207 0 0 0 chr17 878825 878848 -88625705 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 373 301 0 0 chr17 879093 879226 -88625327 + G-rich Low_complexity Low_complexity 1 133 0 897 163 0 0 chr17 879381 879516 -88625037 + AluJo SINE Alu 1 135 -177 1627 200 0 0 chr17 879516 879806 -88624747 + AluJb SINE Alu 1 290 -22 2128 110 3 0 chr17 880057 880349 -88624204 - AluSx SINE Alu -19 293 1 2071 116 10 0 chr17 880352 880644 -88623909 - AluSq SINE Alu -18 295 1 267 31 0 0 chr17 881187 881219 -88623334 + (TG)n Simple_repeat Simple_repeat 2 33 0 1552 182 7 20 chr17 881219 881376 -88623177 - AluJo SINE Alu -20 292 139 2045 78 32 0 chr17 881376 881657 -88622896 - AluSg SINE Alu -8 302 13 1552 182 7 20 chr17 881657 881795 -88622758 - AluJo SINE Alu -173 139 1 2135 109 0 0 chr17 882514 882808 -88621745 - AluSg SINE Alu -16 294 1 526 321 59 45 chr17 883281 883445 -88621108 + MIR SINE MIR 39 208 -54 2229 91 0 10 chr17 883445 883753 -88620800 + AluY SINE Alu 1 305 -6 526 321 59 45 chr17 883753 883809 -88620744 + MIR SINE MIR 208 262 0 228 333 42 0 chr17 884072 884168 -88620385 - MIR3 SINE MIR 0 208 109 1569 72 5 27 chr17 884229 884450 -88620103 - AluY SINE Alu -2 309 94 2019 147 0 0 chr17 885409 885708 -88618845 + AluJb SINE Alu 1 299 -13 1749 137 53 14 chr17 885709 886244 -88618309 + Tigger1 DNA MER2_type 1582 2208 -210 2142 109 3 0 chr17 886244 886547 -88618006 - AluY SINE Alu -7 304 1 2064 131 3 7 chr17 886548 886854 -88617699 - AluSx SINE Alu -7 305 1 248 217 17 0 chr17 886854 886914 -88617639 + Tigger1 DNA MER2_type 2356 2416 -2 6074 165 21 3 chr17 886915 888034 -88616519 - ERVL LTR ERVL -327 5437 4298 6127 195 17 12 chr17 888418 889720 -88614833 - ERVL LTR ERVL -1426 4338 3031 245 196 0 36 chr17 889723 889779 -88614774 - MLT2D LTR ERVL -360 54 1 239 114 0 0 chr17 889895 889930 -88614623 + Alu SINE Alu 1 35 -267 2213 84 0 20 chr17 890111 890410 -88614143 + AluSg SINE Alu 1 293 -17 229 325 34 34 chr17 890441 890558 -88613995 + MIR SINE MIR 28 144 -118 223 206 14 96 chr17 893367 893440 -88611113 - MIR3 SINE MIR -31 177 111 831 118 0 0 chr17 894199 894343 -88610210 + (TGGA)n Simple_repeat Simple_repeat 1 144 0 223 250 0 36 chr17 895692 895776 -88608777 + G-rich Low_complexity Low_complexity 1 81 0 682 268 41 41 chr17 897433 897676 -88606877 + MIR SINE MIR 10 252 -10 2080 135 3 0 chr17 897860 898171 -88606382 - AluSx SINE Alu 0 312 1 863 192 23 6 chr17 898240 898417 -88606136 - AluJb SINE Alu -12 300 121 271 272 39 10 chr17 898546 898649 -88605904 - L1MC5 LINE L1 -34 7927 7822 441 257 117 9 chr17 898741 898840 -88605713 - L1MC5 LINE L1 -267 7694 7607 2201 73 0 4 chr17 898840 899115 -88605438 - AluY SINE Alu -15 296 23 441 257 117 9 chr17 899115 899229 -88605324 - L1MC5 LINE L1 -354 7607 7458 410 263 47 52 chr17 899890 900103 -88604450 - L3 LINE CR1 -348 1229 1018 1316 82 26 60 chr17 900104 900180 -88604373 + MER30 DNA MER1_type 7 84 -146 2220 101 3 0 chr17 900180 900476 -88604077 + AluSp SINE Alu 1 297 -16 1316 82 26 60 chr17 900476 900631 -88603922 + MER30 DNA MER1_type 84 230 0 408 187 0 13 chr17 900672 900686 -88603867 - AluY SINE Alu -83 228 215 2176 106 7 3 chr17 900686 900988 -88603565 - AluSq SINE Alu -6 307 5 408 187 0 13 chr17 900988 901048 -88603505 - AluY SINE Alu -96 215 155 446 425 127 14 chr17 901048 901554 -88602999 - L3 LINE CR1 -830 747 185 2446 50 0 0 chr17 902732 903031 -88601522 - AluY SINE Alu -12 299 1 1758 187 3 0 chr17 903201 903506 -88601047 - AluSx SINE Alu -6 306 1 234 0 0 0 chr17 903586 903612 -88600941 + (TG)n Simple_repeat Simple_repeat 2 27 0 26 30 0 0 chr17 904250 904283 -88600270 + AT_rich Low_complexity Low_complexity 1 33 0 1038 106 0 0 chr17 904300 904441 -88600112 - AluJb SINE Alu -171 141 1 2174 119 3 0 chr17 904671 904974 -88599579 - AluSx SINE Alu -8 304 1 1697 98 38 0 chr17 905417 905652 -88598901 - AluSx SINE Alu -5 307 64 2244 85 0 0 chr17 905752 906035 -88598518 + AluSp SINE Alu 17 299 -14 284 309 86 63 chr17 907264 907439 -88597114 - MIR SINE MIR -27 235 57 230 322 75 62 chr17 907799 907945 -88596608 + MIR SINE MIR 102 249 -13 1125 73 0 0 chr17 907971 908108 -88596445 + AluSq/x SINE Alu 1 137 -176 2028 116 36 0 chr17 908108 908409 -88596144 + AluSx SINE Alu 1 312 0 222 325 12 24 chr17 908501 908584 -88595969 + L2 LINE L2 3226 3307 -6 423 0 0 0 chr17 909622 909669 -88594884 + (CA)n Simple_repeat Simple_repeat 2 48 0 297 242 0 0 chr17 909821 909887 -88594666 + MIR SINE MIR 166 231 -31 367 179 0 84 chr17 909960 910226 -88594327 + (CCA)n Simple_repeat Simple_repeat 1 243 0 461 328 50 35 chr17 910355 910696 -88593857 + MLT1I LTR MaLR 28 373 -36 2133 119 10 0 chr17 910702 911004 -88593549 - AluSx SINE Alu -7 305 1 1320 226 65 12 chr17 911472 911809 -88592744 + L1MB2 LINE L1 5667 6021 -150 975 188 0 5 chr17 911810 912002 -88592551 + MER1B DNA MER1_type 1 191 -106 435 90 0 26 chr17 912003 912081 -88592472 + MER1B DNA MER1_type 243 318 -21 437 247 110 0 chr17 912085 912231 -88592322 + L1MB3 LINE L1 6015 6176 -7 2522 44 0 13 chr17 912236 912551 -88592002 - AluY SINE Alu 0 311 1 28 48 0 0 chr17 912560 912602 -88591951 + AT_rich Low_complexity Low_complexity 1 42 0 2181 109 26 0 chr17 912759 913063 -88591490 - AluSx SINE Alu 0 312 1 779 263 69 23 chr17 913162 913379 -88591174 + MIR SINE MIR 35 261 -1 311 155 0 0 chr17 913499 913560 -88590993 - Alu SINE Alu -255 46 1 354 210 12 0 chr17 913747 913828 -88590725 + L1MB2 LINE L1 5907 5988 -183 899 216 33 9 chr17 914336 914549 -88590004 + MIR SINE MIR 2 219 -43 201 330 41 21 chr17 915054 915151 -88589402 + MIR SINE MIR 91 189 -73 325 80 0 0 chr17 915166 915216 -88589337 + AluY SINE Alu 83 132 -169 997 91 0 0 chr17 915219 915351 -88589202 + AluY SINE Alu 1 132 -179 2176 82 24 3 chr17 915354 915645 -88588908 + AluY SINE Alu 1 297 -14 2229 97 3 3 chr17 915652 915950 -88588603 + AluSq SINE Alu 1 298 -15 1798 100 89 0 chr17 916155 916424 -88588129 + AluSq SINE Alu 1 293 -20 1532 243 93 4 chr17 918724 919198 -88585355 + L1M4 LINE L1 4789 5304 -842 2198 75 41 0 chr17 919202 919494 -88585059 + AluSq SINE Alu 1 304 -9 2171 103 0 0 chr17 919929 920220 -88584333 + AluSx SINE Alu 9 299 -13 688 276 0 29 chr17 920220 920394 -88584159 - MIR SINE MIR -54 208 40 774 249 32 5 chr17 920557 920742 -88583811 - MIR SINE MIR -61 201 12 2365 90 0 0 chr17 920769 921070 -88583483 - AluSx SINE Alu -11 301 1 275 125 0 0 chr17 921830 921870 -88582683 + Alu SINE Alu 1 40 -261 2052 122 3 3 chr17 921906 922200 -88582353 + AluSx SINE Alu 1 294 -18 209 293 0 0 chr17 922337 922395 -88582158 - L2 LINE L2 -638 2676 2619 854 141 7 28 chr17 922403 922545 -88582008 + AluJo SINE Alu 1 139 -173 1677 142 0 76 chr17 922547 922688 -88581865 + AluJo SINE Alu 5 110 -202 2465 45 0 0 chr17 922688 922977 -88581576 + AluY SINE Alu 5 293 -18 1677 142 0 76 chr17 922977 923152 -88581401 + AluJo SINE Alu 110 297 -15 295 174 153 41 chr17 923278 923295 -88581258 + MER5A DNA MER1_type 1 15 -174 1992 118 20 14 chr17 923295 923592 -88580961 + AluSx SINE Alu 3 301 -11 295 174 153 41 chr17 923592 923672 -88580881 + MER5A DNA MER1_type 15 109 -80 263 254 35 12 chr17 924325 924494 -88580059 + (CACCT)n Simple_repeat Simple_repeat 1 173 0 213 272 47 6 chr17 924532 924701 -88579852 + (CACCT)n Simple_repeat Simple_repeat 3 178 0 1999 101 39 3 chr17 925078 925364 -88579189 - AluSc SINE Alu -13 296 1 1072 168 0 0 chr17 925513 925680 -88578873 - AluJb SINE Alu -9 303 137 2224 94 0 0 chr17 926054 926342 -88578211 + AluSx SINE Alu 1 288 -24 1297 223 41 0 chr17 926365 926684 -88577869 - MER63 DNA MER1_type -49 1013 682 1538 84 10 0 chr17 926685 926888 -88577665 - AluSq SINE Alu -5 308 104 1217 98 5 79 chr17 926888 927091 -88577462 - AluSg SINE Alu -122 188 1 1711 61 5 0 chr17 928155 928369 -88576184 + AluY SINE Alu 84 298 -13 514 228 65 8 chr17 928813 928936 -88575617 + MIR SINE MIR 63 192 -70 324 0 0 0 chr17 929864 929900 -88574653 + (TA)n Simple_repeat Simple_repeat 1 36 0 666 191 34 14 chr17 930296 930443 -88574110 - MER20 DNA MER1_type -1 218 69 1884 110 50 11 chr17 930443 930724 -88573829 - AluSg SINE Alu -18 292 1 25 0 0 0 chr17 932684 932709 -88571844 + AT_rich Low_complexity Low_complexity 1 25 0 824 249 40 20 chr17 938152 938353 -88566200 - MIR SINE MIR -37 225 21 261 329 58 44 chr17 942090 942227 -88562326 + MIR SINE MIR 16 154 -54 230 322 59 67 chr17 942797 943036 -88561517 - MER102b DNA MER1_type -9 332 96 300 281 49 0 chr17 944026 944108 -88560445 - MIR SINE MIR -79 183 98 244 290 160 10 chr17 944212 944312 -88560241 + MIR SINE MIR 94 208 -54 848 239 24 0 chr17 944487 944700 -88559853 - Charlie2 DNA MER1_type -41 2821 2604 2540 40 0 0 chr17 944700 944997 -88559556 + AluY SINE Alu 1 297 -14 520 254 103 15 chr17 945085 945097 -88559456 - Charlie2 DNA MER1_type -242 2620 2610 2290 73 0 26 chr17 945097 945410 -88559143 + AluY SINE Alu 1 305 -6 520 254 103 15 chr17 945410 945669 -88558884 - Charlie2 DNA MER1_type -252 2610 2325 1756 108 4 12 chr17 945675 945924 -88558629 + AluSq SINE Alu 1 247 -66 183 80 0 0 chr17 946274 946299 -88558254 + (CGGA)n Simple_repeat Simple_repeat 4 28 0 203 387 0 23 chr17 946398 946571 -88557982 + (CAGA)n Simple_repeat Simple_repeat 1 169 0 203 343 14 34 chr17 946623 946769 -88557784 + (CGGA)n Simple_repeat Simple_repeat 4 146 0 * 217 376 0 22 chr17 946742 946920 -88557633 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 1236 264 77 22 chr17 946932 947286 -88557267 + L1MB3 LINE L1 5748 6128 -55 2188 95 3 7 chr17 947286 947581 -88556972 - AluSx SINE Alu -18 294 1 1236 264 77 22 chr17 947581 947631 -88556922 + L1MB3 LINE L1 6128 6174 -9 511 202 0 37 chr17 947631 947740 -88556813 - AluSg/x SINE Alu -4 305 201 295 376 27 7 chr17 948331 948480 -88556073 + MIR3 SINE MIR 29 180 -28 2097 118 0 3 chr17 948480 948777 -88555776 + AluSx SINE Alu 1 296 -16 277 327 149 14 chr17 949604 949812 -88554741 + MIR SINE MIR 26 261 -1 556 122 14 32 chr17 949902 949952 -88554601 - AluSg/x SINE Alu -131 181 132 1995 141 0 7 chr17 949952 950257 -88554296 - AluSx SINE Alu -9 303 1 556 122 14 32 chr17 950257 950326 -88554227 - AluSg/x SINE Alu -180 132 67 1263 140 5 0 chr17 950329 950522 -88554031 - AluSg SINE Alu -116 194 1 735 76 0 0 chr17 950522 950614 -88553939 - AluSg SINE Alu -177 133 42 336 195 25 33 chr17 950838 950930 -88553623 + MIR SINE MIR 65 156 -52 2048 97 49 0 chr17 953262 953550 -88551003 - AluSg SINE Alu -6 304 3 374 324 0 0 chr17 953762 953898 -88550655 - MER117 DNA MER1_type -52 145 10 299 273 0 29 chr17 954910 955049 -88549504 + C-rich Low_complexity Low_complexity 4 138 0 299 436 22 0 chr17 955280 955459 -88549094 + L2 LINE L2 3111 3293 -20 2173 102 7 3 chr17 955877 956180 -88548373 + AluSx SINE Alu 1 304 -8 262 168 5 138 chr17 956545 956741 -88547812 + G-rich Low_complexity Low_complexity 4 173 0 309 342 32 45 chr17 957100 957255 -88547298 - L1M4 LINE L1 -3110 3036 2884 2189 103 10 0 chr17 957275 957575 -88546978 - AluSx SINE Alu -7 305 3 892 138 0 0 chr17 957579 957709 -88546844 - AluSq/x SINE Alu -181 132 3 269 329 27 13 chr17 957723 957872 -88546681 - L1M4 LINE L1 -3321 2825 2675 2139 111 7 0 chr17 958064 958361 -88546192 - AluSx SINE Alu -13 299 1 370 303 49 32 chr17 959167 959352 -88545201 + MER117 DNA MER1_type 6 193 -4 2143 118 3 9 chr17 959450 959765 -88544788 - AluSq SINE Alu 0 313 1 550 324 70 5 chr17 960283 960496 -88544057 + MIR SINE MIR 28 254 -8 255 352 50 0 chr17 960544 960726 -88543827 + L1ME4a LINE L1 5743 5933 -188 2326 80 0 26 chr17 960914 961225 -88543328 + AluSx SINE Alu 1 303 -9 549 282 124 5 chr17 961756 961958 -88542595 + MIR SINE MIR 14 239 -23 2050 128 0 3 chr17 962413 962703 -88541850 + AluSx SINE Alu 1 289 -23 1581 100 0 0 chr17 963437 963647 -88540906 - AluSg/x SINE Alu -13 297 88 248 143 0 171 chr17 963788 964004 -88540549 + (AGGGGG)n Simple_repeat Simple_repeat 1 179 0 257 144 0 164 chr17 964072 964267 -88540286 + (AGGGGG)n Simple_repeat Simple_repeat 4 166 0 232 291 0 0 chr17 964492 964547 -88540006 + MIR SINE MIR 16 70 -192 335 323 81 6 chr17 965065 965226 -88539327 + MIR SINE MIR 16 188 -74 248 254 87 56 chr17 965999 966125 -88538428 + MIR SINE MIR 81 210 -52 943 103 0 0 chr17 966130 966256 -88538297 + FLAM_C SINE Alu 1 126 -7 371 233 12 0 chr17 966442 966528 -88538025 - MIR SINE MIR -141 121 35 2226 84 0 3 chr17 966569 966868 -88537685 - AluSg SINE Alu -12 298 1 270 335 28 50 chr17 967555 967737 -88536816 + L2 LINE L2 2671 2848 -466 530 29 15 0 chr17 968350 968418 -88536135 + (TG)n Simple_repeat Simple_repeat 2 70 0 1705 108 0 0 chr17 968418 968650 -88535903 - AluSg/x SINE Alu -11 301 70 432 67 0 0 chr17 968685 968745 -88535808 + (TG)n Simple_repeat Simple_repeat 1 60 0 212 330 88 51 chr17 968749 968949 -88535604 + MIR SINE MIR 19 216 -46 2326 100 0 0 chr17 969171 969481 -88535072 - AluSq SINE Alu -3 310 1 1125 277 71 30 chr17 969989 970524 -88534029 + MER74B LTR ERVL 56 612 -10 252 337 22 15 chr17 970835 970970 -88533583 + L1MC/D LINE L1 5440 5575 -578 2239 91 3 0 chr17 971171 971469 -88533084 + AluSx SINE Alu 2 300 -12 2275 89 0 22 chr17 971752 972066 -88532487 + AluSg SINE Alu 1 307 -3 511 107 27 0 chr17 972631 972706 -88531847 - AluS SINE Alu -235 77 1 2394 72 3 0 chr17 973402 973707 -88530846 + AluSx SINE Alu 1 306 -6 1591 114 5 0 chr17 975247 975466 -88529087 + AluSq SINE Alu 80 299 -14 473 280 36 36 chr17 976040 976208 -88528345 + MER5B DNA MER1_type 11 178 0 32 26 0 0 chr17 976215 976254 -88528299 + AT_rich Low_complexity Low_complexity 1 39 0 2178 109 0 0 chr17 976263 976557 -88527996 + AluSx SINE Alu 1 294 -18 316 96 115 0 chr17 976557 976609 -88527944 - AluJo/FLAM SINE Alu -182 120 63 527 132 13 0 chr17 976615 976691 -88527862 - AluJ/FLAM SINE Alu -220 92 16 322 302 101 23 chr17 977478 977607 -88526946 - MIR SINE MIR -14 248 110 243 0 0 0 chr17 978608 978635 -88525918 + (TG)n Simple_repeat Simple_repeat 1 27 0 223 167 30 0 chr17 979511 979577 -88524976 + G-rich Low_complexity Low_complexity 1 68 0 228 200 0 0 chr17 979685 979745 -88524808 + (CA)n Simple_repeat Simple_repeat 1 60 0 2385 96 0 0 chr17 980010 980322 -88524231 + AluSx SINE Alu 1 312 0 995 92 0 0 chr17 981747 981878 -88522675 - AluJb SINE Alu -181 131 1 2214 92 3 0 chr17 982088 982380 -88522173 - AluSx SINE Alu -19 293 1 196 262 33 49 chr17 983124 983185 -88521368 - L3 LINE CR1 -1 1576 1517 * 406 269 35 21 chr17 983182 983327 -88521226 - MER5A DNA MER1_type -6 183 37 2135 108 27 0 chr17 983353 983649 -88520904 + AluSx SINE Alu 1 304 -8 338 248 9 57 chr17 983650 983755 -88520798 - MIR3 SINE MIR -44 164 65 216 0 0 0 chr17 983766 983790 -88520763 + (T)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr17 983823 983847 -88520706 + AT_rich Low_complexity Low_complexity 1 24 0 2080 94 59 0 chr17 984615 984902 -88519651 + AluSx SINE Alu 1 304 -8 312 295 27 9 chr17 985199 985311 -88519242 + L1ME LINE L1 5416 5529 -635 2211 75 24 0 chr17 985313 985605 -88518948 - AluSp SINE Alu -14 299 1 939 81 0 0 chr17 985614 985738 -88518815 - AluSg/x SINE Alu -10 300 177 1454 34 0 22 chr17 985839 986017 -88518536 - AluY SINE Alu -137 174 1 287 263 32 0 chr17 986022 986117 -88518436 + L1ME LINE L1 5522 5619 -551 1085 220 27 8 chr17 986206 986465 -88518088 + MER33 DNA MER1_type 8 271 -53 808 169 0 8 chr17 986466 986596 -88517957 + AluSq/x SINE Alu 1 129 -183 387 0 0 0 chr17 988094 988137 -88516416 + (TAA)n Simple_repeat Simple_repeat 1 43 0 683 232 23 114 chr17 988144 988214 -88516339 - MIR SINE MIR -1 261 186 2205 107 0 22 chr17 988214 988533 -88516020 - AluSx SINE Alu 0 312 1 2185 116 0 7 chr17 988534 988837 -88515716 - AluSg SINE Alu -9 301 1 876 160 0 0 chr17 988844 988975 -88515578 - FLAM_C SINE Alu -2 131 1 683 232 23 114 chr17 988975 989157 -88515396 - MIR SINE MIR -82 180 23 2421 60 0 0 chr17 989319 989617 -88514936 + AluSq SINE Alu 1 298 -15 304 313 119 24 chr17 989712 989995 -88514558 - L2 LINE L2 -222 3050 2740 231 275 12 50 chr17 992664 992744 -88511809 + L3 LINE CR1 1426 1502 -75 196 252 184 78 chr17 993287 993390 -88511163 + MIR SINE MIR 38 151 -111 2130 123 0 3 chr17 993453 993754 -88510799 - AluSx SINE Alu -12 300 1 533 247 121 37 chr17 996366 996392 -88508161 - MIR SINE MIR -37 225 203 2360 96 0 0 chr17 996392 996695 -88507858 + AluSx SINE Alu 2 304 -8 533 247 121 37 chr17 996695 996858 -88507695 - MIR SINE MIR -59 203 20 225 269 15 30 chr17 997077 997144 -88507409 - MIR SINE MIR -56 152 87 2289 68 0 16 chr17 997148 997459 -88507094 - AluY SINE Alu -5 306 1 291 269 200 0 chr17 997524 997654 -88506899 + MER112 DNA MER1_type 66 221 -39 2220 71 0 4 chr17 997889 998169 -88506384 - AluSq SINE Alu -34 279 1 1813 142 14 7 chr17 998169 998458 -88506095 - AluSx SINE Alu -21 291 1 2316 91 7 0 chr17 998928 999235 -88505318 + AluSq SINE Alu 1 309 -4 2269 98 0 0 chr17 999910 1000206 -88504347 - AluSx SINE Alu -16 296 1 1164 54 0 20 chr17 1000209 1000357 -88504196 - AluSq/x SINE Alu -167 145 1 305 237 246 17 chr17 1000402 1000520 -88504033 - L1ME4a LINE L1 -14 6107 5963 342 232 174 51 chr17 1000695 1000806 -88503747 - L2 LINE L2 0 3313 3180 2590 42 0 0 chr17 1000806 1001115 -88503438 - AluY SINE Alu -2 309 1 342 232 174 51 chr17 1001115 1001141 -88503412 - L2 LINE L2 -133 3180 3159 920 205 44 61 chr17 1001419 1001531 -88503022 + MLT1D LTR MaLR 248 360 -145 1197 111 156 0 chr17 1001531 1001730 -88502823 + MER30 DNA MER1_type 1 230 0 920 205 44 61 chr17 1001730 1001788 -88502765 + MLT1D LTR MaLR 360 417 -88 2137 105 3 3 chr17 1001788 1002092 -88502461 - AluSx SINE Alu -8 304 1 920 205 44 61 chr17 1002092 1002192 -88502361 + MLT1D LTR MaLR 417 505 0 295 232 20 30 chr17 1003980 1004079 -88500474 + MER113 DNA MER1_type? 1 98 -423 1844 92 0 0 chr17 1004086 1004326 -88500227 - AluSg/x SINE Alu -7 305 66 2332 95 0 0 chr17 1004961 1005265 -88499288 - AluSx SINE Alu -8 304 1 206 299 65 56 chr17 1006330 1006437 -88498116 - MIR SINE MIR -56 206 99 207 244 0 0 chr17 1007552 1007597 -88496956 + G-rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr17 1007669 1007689 -88496864 + (CCG)n Simple_repeat Simple_repeat 2 21 0 512 277 47 14 chr17 1008839 1009052 -88495501 - Charlie8 DNA MER1_type -2183 234 15 934 141 14 0 chr17 1010890 1011032 -88493521 + FRAM SINE Alu 2 145 -31 300 137 0 0 chr17 1011034 1011085 -88493468 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 483 305 71 46 chr17 1011459 1011698 -88492855 - L2 LINE L2 -4 3268 3024 2377 84 0 0 chr17 1011715 1012023 -88492530 - AluSx SINE Alu -4 308 1 306 318 18 18 chr17 1012025 1012135 -88492418 + L2 LINE L2 2997 3106 -166 666 177 9 0 chr17 1012455 1012568 -88491985 + FRAM SINE Alu 49 162 -14 2074 124 3 0 chr17 1012571 1012869 -88491684 + AluSx SINE Alu 1 299 -13 2407 65 0 0 chr17 1012873 1013166 -88491387 + AluSx SINE Alu 1 293 -19 504 164 22 104 chr17 1013255 1013389 -88491164 - L2 LINE L2 0 3313 3191 2189 88 0 7 chr17 1014025 1014321 -88490232 + AluSx SINE Alu 1 294 -18 2195 92 23 0 chr17 1014327 1014632 -88489921 + AluSx SINE Alu 1 312 0 581 230 24 0 chr17 1014717 1014843 -88489710 + MIR SINE MIR 48 176 -86 189 339 0 0 chr17 1015068 1015127 -88489426 + MIR SINE MIR 90 148 -114 185 333 91 10 chr17 1017940 1018039 -88486514 - L2 LINE L2 -5 3308 3202 802 251 6 0 chr17 1018243 1018406 -88486147 - FAM SINE Alu -11 164 1 561 270 20 0 chr17 1018406 1018543 -88486010 + MIR SINE MIR 82 224 -38 2079 112 0 31 chr17 1018604 1018925 -88485628 - AluSx SINE Alu -1 311 1 362 292 26 50 chr17 1019085 1019244 -88485309 - MIR3 SINE MIR -62 146 12 279 286 0 0 chr17 1020311 1020381 -88484172 - MIR SINE MIR -68 140 71 2277 104 0 0 chr17 1020382 1020681 -88483872 - AluSx SINE Alu -13 299 1 1814 244 20 75 chr17 1020751 1021301 -88483252 + MLT2B1 LTR ERVL 1 520 0 23 0 0 0 chr17 1023913 1023936 -88480617 + GC_rich Low_complexity Low_complexity 1 23 0 239 308 92 0 chr17 1025241 1025361 -88479192 + L2 LINE L2 3142 3272 0 587 247 88 83 chr17 1026857 1027278 -88477275 + MLT1J LTR MaLR 4 426 -85 397 257 59 26 chr17 1027281 1027433 -88477120 + MLT1J LTR MaLR 351 507 -4 739 95 0 1 chr17 1027551 1027661 -88476892 + L1PA8 LINE L1 5958 6068 -106 1909 128 23 7 chr17 1027661 1027967 -88476586 + AluY SINE Alu 1 311 0 739 95 0 1 chr17 1027967 1027980 -88476573 + L1PA8 LINE L1 6068 6080 -94 2070 145 0 0 chr17 1028072 1028382 -88476171 + AluSg SINE Alu 1 310 0 305 345 44 0 chr17 1028431 1028544 -88476009 + L1MC4 LINE L1 7924 8041 -1 785 270 104 37 chr17 1028994 1029427 -88475126 + MLT1C LTR MaLR 6 467 0 2393 73 0 3 chr17 1030519 1030819 -88473734 - AluSp SINE Alu -14 299 1 507 242 47 32 chr17 1030821 1031011 -88473542 - Charlie2 DNA MER1_type -556 2306 2114 460 137 41 0 chr17 1031025 1031098 -88473455 + FLAM SINE Alu 57 132 -11 892 275 30 0 chr17 1031099 1031361 -88473192 - Charlie2 DNA MER1_type -737 2125 1856 2361 76 3 0 chr17 1031375 1031677 -88472876 - AluSx SINE Alu -9 303 1 497 268 22 0 chr17 1031799 1031937 -88472616 - Charlie2 DNA MER1_type -2633 149 9 2308 98 7 0 chr17 1032524 1032829 -88471724 - AluSq SINE Alu -6 307 1 1057 82 0 0 chr17 1032829 1032964 -88471589 - AluSq/x SINE Alu -178 135 1 595 217 25 17 chr17 1032968 1033088 -88471465 - FLAM_C SINE Alu -15 128 8 2392 42 0 0 chr17 1033095 1033403 -88471150 - AluY SINE Alu 0 308 1 318 200 0 0 chr17 1033414 1033474 -88471079 - L1MA6 LINE L1 -5 6295 6236 265 309 161 2 chr17 1033663 1033815 -88470738 + MIR3 SINE MIR 10 187 -75 423 339 51 18 chr17 1033816 1034049 -88470504 - MIR SINE MIR -3 259 25 2362 70 3 0 chr17 1035143 1035444 -88469109 - AluSx SINE Alu -10 302 1 2072 60 53 21 chr17 1036585 1036868 -88467685 + AluSc SINE Alu 1 292 -17 820 82 4 2 chr17 1036938 1037194 -88467359 + AluSx SINE Alu 1 308 -4 2358 88 0 0 chr17 1038803 1039110 -88465443 + AluSx SINE Alu 1 307 -5 227 289 141 58 chr17 1039436 1039557 -88464996 + MIR SINE MIR 10 140 -122 1832 154 16 0 chr17 1039565 1039871 -88464682 + AluJb SINE Alu 1 311 -1 2350 62 7 10 chr17 1039898 1040206 -88464347 + AluY SINE Alu 1 307 -4 1276 101 0 0 chr17 1040207 1040386 -88464167 + AluSg/x SINE Alu 134 312 0 420 289 237 20 chr17 1040461 1040953 -88463600 + L2 LINE L2 2688 3297 -16 397 278 43 43 chr17 1041201 1041363 -88463190 - MIR3 SINE MIR -42 166 5 2096 76 0 28 chr17 1043170 1043459 -88461094 - AluSx SINE Alu -31 281 1 565 103 0 0 chr17 1043459 1043537 -88461016 - AluSq/x SINE Alu -177 135 58 202 244 0 0 chr17 1044163 1044208 -88460345 + A-rich Low_complexity Low_complexity 1 45 0 331 79 20 59 chr17 1046909 1047010 -88457543 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 212 286 165 23 chr17 1048025 1048158 -88456395 - MIR SINE MIR -108 154 3 351 305 105 42 chr17 1048397 1048587 -88455966 - MIR SINE MIR -60 202 1 1867 127 64 0 chr17 1049030 1049313 -88455240 - AluSx SINE Alu -11 301 1 189 289 0 56 chr17 1049315 1049405 -88455148 - L2 LINE L2 0 3272 3188 429 317 0 16 chr17 1050362 1050545 -88454008 + C-rich Low_complexity Low_complexity 1 180 0 2471 56 0 0 chr17 1250548 1250836 -88253717 - AluY SINE Alu -23 288 1 1000 217 14 9 chr17 1250840 1251057 -88253496 - AluJo SINE Alu -10 302 85 1509 204 10 10 chr17 1251088 1251265 -88253288 - AluJb SINE Alu 0 312 133 1363 240 10 3 chr17 1251265 1251565 -88252988 - AluSg1 SINE Alu -7 302 1 1509 204 10 10 chr17 1251565 1251686 -88252867 - AluJb SINE Alu -178 134 14 2064 110 48 14 chr17 1251857 1252147 -88252406 + AluSx SINE Alu 1 300 -12 2239 120 0 3 chr17 1252152 1252461 -88252092 + AluSx SINE Alu 1 308 -4 603 229 76 0 chr17 1252473 1252617 -88251936 + FRAM SINE Alu 1 155 -21 1332 209 77 33 chr17 1252617 1253047 -88251506 + L1MB4 LINE L1 5598 6046 -134 2331 53 0 0 chr17 1253148 1253437 -88251116 + AluY SINE Alu 18 306 0 1128 192 77 86 chr17 1253748 1253966 -88250587 + L1MB8 LINE L1 5827 6045 -133 2438 83 3 10 chr17 1253966 1254279 -88250274 - AluY SINE Alu 0 311 1 2335 105 0 7 chr17 1254280 1254586 -88249967 - AluSx SINE Alu -8 304 1 1128 192 77 86 chr17 1254586 1254714 -88249839 + L1MB8 LINE L1 6044 6172 -6 225 382 7 15 chr17 1254803 1254939 -88249614 - MIR SINE MIR -36 226 92 1459 167 16 4 chr17 1255151 1255396 -88249157 - AluSx SINE Alu -64 248 1 461 172 255 0 chr17 1255745 1255889 -88248664 - MER58B DNA MER1_type 0 341 45 998 135 0 27 chr17 1255897 1256045 -88248508 + AluJo SINE Alu 1 144 -168 198 0 0 0 chr17 1256049 1256071 -88248482 + (A)n Simple_repeat Simple_repeat 1 22 0 1446 108 0 5 chr17 1256079 1256264 -88248289 + AluSq SINE Alu 2 185 -128 1348 162 0 0 chr17 1256364 1256568 -88247985 + AluSp SINE Alu 105 308 -5 568 187 14 29 chr17 1256568 1256707 -88247846 - L1MC3 LINE L1 -37 7748 7612 1291 156 0 0 chr17 1256707 1256899 -88247654 + AluJo SINE Alu 104 295 -17 2260 97 10 7 chr17 1256901 1257201 -88247352 + AluSx SINE Alu 1 301 -11 2458 84 3 3 chr17 1257633 1257943 -88246610 + AluSx SINE Alu 1 310 -2 290 297 72 0 chr17 1258007 1258118 -88246435 + MLT1K LTR MaLR 168 286 -302 477 263 60 65 chr17 1258205 1258422 -88246131 + MLT1K LTR MaLR 346 561 -27 1488 123 0 31 chr17 1258511 1258738 -88245815 - AluSg/x SINE Alu 0 312 93 1761 164 21 3 chr17 1258740 1259026 -88245527 - AluJb SINE Alu -15 297 7 1058 63 8 0 chr17 1259348 1259475 -88245078 + AluY SINE Alu 3 130 -181 1098 179 56 0 chr17 1259503 1259698 -88244855 - AluJb SINE Alu -22 290 85 2093 128 42 0 chr17 1260112 1260401 -88244152 + AluSx SINE Alu 1 301 -11 2592 74 0 0 chr17 1260401 1260712 -88243841 + AluY SINE Alu 1 311 0 285 186 0 58 chr17 1260760 1260846 -88243707 + L1MEd LINE L1 22 102 -6017 455 200 0 0 chr17 1261335 1261415 -88243138 - AluJb SINE Alu -96 216 137 1697 182 7 0 chr17 1261415 1261701 -88242852 - AluSq SINE Alu -4 309 22 2498 66 0 10 chr17 1261833 1262137 -88242416 - AluY SINE Alu -10 301 1 1144 148 0 0 chr17 1262140 1262309 -88242244 - FRAM SINE Alu -12 164 1 1200 160 104 76 chr17 1262653 1262941 -88241612 + AluJb SINE Alu 1 296 -16 1861 144 10 17 chr17 1263193 1263329 -88241224 + AluJb SINE Alu 1 136 -176 2072 130 10 0 chr17 1263329 1263628 -88240925 + AluSg1 SINE Alu 1 302 -7 1861 144 10 17 chr17 1263628 1263783 -88240770 + AluJb SINE Alu 136 290 -22 2298 79 10 3 chr17 1263903 1264194 -88240359 - AluSg SINE Alu -17 293 1 2370 84 3 0 chr17 1264447 1264746 -88239807 + AluY SINE Alu 1 300 -11 2187 114 3 0 chr17 1265675 1265974 -88238579 + AluY SINE Alu 1 300 -11 2148 101 13 20 chr17 1266290 1266596 -88237957 - AluSq SINE Alu -4 309 6 2441 93 0 0 chr17 1266706 1267006 -88237547 - AluSg SINE Alu -10 300 1 2381 82 0 10 chr17 1267029 1267332 -88237221 - AluSx SINE Alu -12 300 1 596 172 0 97 chr17 1267396 1267470 -88237083 + FLAM_A SINE Alu 2 57 -245 1668 181 31 0 chr17 1267470 1267758 -88236795 - AluSx SINE Alu -15 297 1 596 172 0 97 chr17 1267758 1267828 -88236725 + FLAM_A SINE Alu 57 132 -170 1451 215 29 26 chr17 1267828 1268139 -88236414 + AluJo SINE Alu 1 312 0 299 242 290 11 chr17 1268389 1268544 -88236009 + MIR SINE MIR 11 121 -141 2173 124 13 0 chr17 1268544 1268850 -88235703 + AluSx SINE Alu 1 310 -2 299 242 290 11 chr17 1268850 1268880 -88235673 + MIR SINE MIR 121 248 -14 454 111 0 0 chr17 1269007 1269070 -88235483 + AluJ/FLAM SINE Alu 4 66 -246 324 148 0 0 chr17 1269163 1269217 -88235336 + AluJ/FRAM SINE Alu 216 269 -33 393 143 14 29 chr17 1269635 1269705 -88234848 - AluJ/FLAM SINE Alu -233 69 1 625 261 38 0 chr17 1269712 1269869 -88234684 - FAM SINE Alu -12 163 1 1103 165 42 24 chr17 1269902 1270114 -88234439 + AluY SINE Alu 84 299 -12 2283 82 6 32 chr17 1270114 1270429 -88234124 + AluSp SINE Alu 1 307 -6 2507 58 7 0 chr17 1270438 1270732 -88233821 + AluY SINE Alu 1 296 -15 1151 81 0 0 chr17 1271498 1271634 -88232919 - AluSc SINE Alu -173 136 1 2519 50 0 7 chr17 1272162 1272464 -88232089 - AluY SINE Alu -11 300 1 2293 106 0 25 chr17 1273168 1273488 -88231065 - AluSx SINE Alu 0 312 1 1078 166 0 117 chr17 1273653 1273719 -88230834 + AluJb SINE Alu 66 138 -174 2400 77 0 7 chr17 1273719 1274016 -88230537 + AluSg SINE Alu 1 295 -15 2430 80 6 13 chr17 1274020 1274333 -88230220 + AluY SINE Alu 1 311 0 1078 166 0 117 chr17 1274333 1274437 -88230116 + AluJb SINE Alu 141 206 -106 2115 128 0 10 chr17 1274437 1274742 -88229811 + AluSx SINE Alu 1 302 -10 1078 166 0 117 chr17 1274742 1274812 -88229741 + AluJb SINE Alu 206 283 -29 2104 134 3 0 chr17 1274814 1275112 -88229441 + AluSx SINE Alu 3 301 -11 21 0 0 0 chr17 1275186 1275207 -88229346 + AT_rich Low_complexity Low_complexity 1 21 0 1042 201 52 81 chr17 1275207 1275275 -88229278 + AluJo SINE Alu 1 69 -233 1866 168 11 0 chr17 1275275 1275560 -88228993 + AluJb SINE Alu 9 296 -16 1884 160 0 3 chr17 1275562 1275862 -88228691 + AluJb SINE Alu 1 299 -13 1042 201 52 81 chr17 1275862 1275929 -88228624 + AluJo SINE Alu 70 137 -165 2305 82 0 7 chr17 1275929 1276221 -88228332 + AluSg1 SINE Alu 1 290 -19 1042 201 52 81 chr17 1276221 1276390 -88228163 + AluJo SINE Alu 137 300 -2 446 176 11 11 chr17 1276395 1276486 -88228067 + FLAM_A SINE Alu 35 125 -17 1646 168 51 10 chr17 1276491 1276783 -88227770 + AluJb SINE Alu 1 304 -8 1305 159 151 4 chr17 1276809 1276967 -88227586 - AluJo SINE Alu -24 288 155 219 36 0 0 chr17 1276967 1276995 -88227558 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1305 159 151 4 chr17 1276995 1277087 -88227466 - AluJo SINE Alu -157 155 1 780 159 0 8 chr17 1277089 1277221 -88227332 - FLAM_C SINE Alu -2 131 1 1582 169 3 71 chr17 1277222 1277404 -88227149 - AluJo SINE Alu -4 308 156 2570 61 0 0 chr17 1277404 1277701 -88226852 - AluY SINE Alu -14 297 1 1582 169 3 71 chr17 1277701 1277844 -88226709 - AluJo SINE Alu -156 156 5 1805 162 27 7 chr17 1277855 1278152 -88226401 - AluJb SINE Alu -9 303 1 2274 67 0 21 chr17 1278318 1278603 -88225950 + AluY SINE Alu 1 279 -32 1366 168 82 8 chr17 1278603 1278859 -88225694 + AluJb SINE Alu 9 283 -29 1987 169 0 0 chr17 1279289 1279585 -88224968 + AluJb SINE Alu 1 296 -16 2261 94 0 39 chr17 1279753 1280060 -88224493 + AluSx SINE Alu 1 295 -17 781 173 0 0 chr17 1280368 1280501 -88224052 + FLAM_A SINE Alu 1 133 0 230 136 23 0 chr17 1281814 1281858 -88222695 + CT-rich Low_complexity Low_complexity 3 47 0 757 207 23 52 chr17 1281898 1282072 -88222481 + AluJb SINE Alu 3 171 -141 189 196 0 0 chr17 1282228 1282274 -88222279 + T-rich Low_complexity Low_complexity 1 46 0 1977 143 31 0 chr17 1282368 1282662 -88221891 + AluJb SINE Alu 1 303 -9 1156 168 0 0 chr17 1282935 1283108 -88221445 + AluJb SINE Alu 137 309 -3 2330 80 3 10 chr17 1283578 1283879 -88220674 - AluSx SINE Alu -13 299 1 1506 114 59 62 chr17 1284293 1284599 -88219954 + AluY SINE Alu 2 306 -5 183 179 26 0 chr17 1284631 1284670 -88219883 + MIR SINE MIR 106 145 -117 349 337 86 11 chr17 1285280 1285467 -88219086 - MIR SINE MIR -10 252 52 430 265 27 27 chr17 1285541 1285688 -88218865 + MIR SINE MIR 70 216 -46 2019 103 4 0 chr17 1285712 1285974 -88218579 + AluSx SINE Alu 1 263 -49 2367 101 0 0 chr17 1286001 1286307 -88218246 + AluSg SINE Alu 1 306 -4 710 276 47 41 chr17 1286309 1286649 -88217904 - MLT1J2 LTR MaLR -1 449 108 388 258 24 24 chr17 1286672 1286796 -88217757 - MLT1F LTR MaLR 0 542 419 2323 114 7 0 chr17 1286895 1287203 -88217350 + AluSg SINE Alu 1 310 0 2502 68 0 10 chr17 1287213 1287524 -88217029 + AluY SINE Alu 1 308 -3 226 311 0 0 chr17 1287586 1287660 -88216893 + L1M4 LINE L1 4645 4718 -1428 1692 128 120 0 chr17 1287884 1288150 -88216403 - AluJo SINE Alu -14 298 1 2199 100 13 19 chr17 1288213 1288523 -88216030 - AluSx SINE Alu -4 308 1 1166 59 0 0 chr17 1288523 1288658 -88215895 - AluSq/x SINE Alu -177 135 1 394 245 31 87 chr17 1289156 1289310 -88215243 - MIR SINE MIR -10 252 110 2393 94 0 7 chr17 1289310 1289619 -88214934 + AluSx SINE Alu 1 307 -5 394 245 31 87 chr17 1289619 1289660 -88214893 - MIR SINE MIR -152 110 68 839 116 14 43 chr17 1290033 1290171 -88214382 - AluJb SINE Alu -178 134 1 2286 101 14 0 chr17 1290534 1290831 -88213722 + AluSg SINE Alu 1 301 -9 2498 87 0 3 chr17 1292436 1292747 -88211806 + AluSg SINE Alu 1 310 0 188 306 56 14 chr17 1293153 1293225 -88211328 + L2 LINE L2 3237 3311 -2 185 213 106 0 chr17 1293384 1293431 -88211122 + L2 LINE L2 3257 3308 -5 25 0 0 0 chr17 1294096 1294121 -88210432 + AT_rich Low_complexity Low_complexity 1 25 0 2157 117 0 13 chr17 1294242 1294541 -88210012 - AluSq SINE Alu -17 296 2 373 105 0 0 chr17 1294684 1294741 -88209812 + Alu SINE Alu 241 297 -5 2332 105 0 10 chr17 1294922 1295237 -88209316 - AluSx SINE Alu -2 310 1 185 182 0 45 chr17 1295237 1295272 -88209281 - L2 LINE L2 -10 3303 3269 * 186 212 242 0 chr17 1295244 1295310 -88209243 - MIR SINE MIR -11 251 170 1983 127 0 3 chr17 1295312 1295619 -88208934 - AluSp SINE Alu -7 306 1 1513 169 3 41 chr17 1295619 1295858 -88208695 - L1M3 LINE L1 -439 5732 5486 2020 106 0 3 chr17 1295858 1296186 -88208367 - AluSx SINE Alu 0 327 1 1524 170 35 14 chr17 1296191 1296479 -88208074 - AluJb SINE Alu -18 294 1 2196 91 7 0 chr17 1296484 1296780 -88207773 - AluY SINE Alu -13 298 1 1513 169 3 41 chr17 1296780 1296822 -88207731 - L1M3 LINE L1 -693 5478 5449 1116 210 25 43 chr17 1296950 1297127 -88207426 + L1M4 LINE L1 4490 4660 -1486 2128 110 0 0 chr17 1297127 1297426 -88207127 + AluSx SINE Alu 1 299 -13 1116 210 25 43 chr17 1297426 1297572 -88206981 + L1M4 LINE L1 4660 4807 -1339 1236 89 0 0 chr17 1297574 1297742 -88206811 + AluYa5 SINE Alu 136 303 -8 925 264 49 37 chr17 1297742 1297840 -88206713 + L1M4 LINE L1 4796 4891 -1255 2228 100 0 7 chr17 1297840 1298150 -88206403 + AluSx SINE Alu 1 308 -4 925 264 49 37 chr17 1298150 1298456 -88206097 + L1M4 LINE L1 4891 5205 -941 2223 77 3 0 chr17 1298457 1298743 -88205810 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr17 1298743 1298763 -88205790 + (GA)n Simple_repeat Simple_repeat 2 21 0 300 206 59 0 chr17 1298789 1298857 -88205696 - MER5A DNA MER1_type -1 188 117 232 277 76 61 chr17 1299069 1299271 -88205282 - MIR SINE MIR -39 169 3 591 126 11 32 chr17 1299333 1299428 -88205125 + AluSq SINE Alu 77 169 -144 1359 139 18 118 chr17 1299714 1299905 -88204648 - AluJb SINE Alu -14 298 152 2411 62 0 0 chr17 1299905 1300210 -88204343 - AluY SINE Alu -6 305 1 1359 139 18 118 chr17 1300210 1300349 -88204204 - AluJb SINE Alu -160 152 1 2352 44 14 0 chr17 1300491 1300786 -88203767 + AluSq SINE Alu 1 299 -14 214 263 99 134 chr17 1300800 1300835 -88203718 + MER5B DNA MER1_type 6 41 -137 396 0 0 0 chr17 1300835 1300879 -88203674 + (CA)n Simple_repeat Simple_repeat 2 45 0 214 263 99 134 chr17 1300879 1301014 -88203539 + MER5B DNA MER1_type 41 170 -8 348 43 0 0 chr17 1301595 1301641 -88202912 + (CA)n Simple_repeat Simple_repeat 2 47 0 351 239 102 100 chr17 1301739 1302098 -88202455 + L1ME4a LINE L1 5710 6072 -49 2054 106 18 0 chr17 1302098 1302382 -88202171 - AluSq SINE Alu -24 289 1 351 239 102 100 chr17 1302382 1302432 -88202121 + L1ME4a LINE L1 6072 6120 -1 2177 110 0 0 chr17 1303316 1303615 -88200938 + AluSx SINE Alu 1 299 -13 470 117 9 126 chr17 1303636 1303682 -88200871 + MLT1A2 LTR MaLR 1 28 -346 2448 51 0 0 chr17 1303682 1303976 -88200577 + AluY SINE Alu 1 294 -17 470 117 9 126 chr17 1303976 1304040 -88200513 + MLT1A2 LTR MaLR 28 98 -276 1158 114 10 13 chr17 1304148 1304396 -88200157 + AluSg/x SINE Alu 87 300 -10 1688 142 7 14 chr17 1304396 1304678 -88199875 + AluSx SINE Alu 1 280 -32 321 149 0 0 chr17 1305133 1305180 -88199373 - U6 snRNA snRNA -60 47 1 2156 108 0 13 chr17 1305340 1305654 -88198899 - AluSx SINE Alu -2 310 1 511 208 15 69 chr17 1305796 1305926 -88198627 - L2 LINE L2 -4 3309 3187 574 107 49 74 chr17 1306381 1306503 -88198050 - FLAM_C SINE Alu -2 141 23 230 222 0 0 chr17 1306729 1306774 -88197779 + Charlie3 DNA MER1_type 1 45 -2665 * 526 68 0 40 chr17 1306755 1306829 -88197724 + Charlie3 DNA MER1_type 2636 2706 -4 402 130 0 39 chr17 1307146 1307223 -88197330 - Alu SINE Alu -2 309 236 418 185 37 0 chr17 1307240 1307321 -88197232 + FAM SINE Alu 91 174 -11 1671 85 8 24 chr17 1307347 1307594 -88196959 + AluSp SINE Alu 37 279 -34 684 117 162 0 chr17 1307595 1307706 -88196847 + AluSg1 SINE Alu 2 130 -179 1126 129 0 0 chr17 1307835 1307998 -88196555 + AluSg1 SINE Alu 137 299 -13 305 111 0 0 chr17 1308019 1308064 -88196489 + MLT1A2 LTR MaLR 1 45 -329 2229 63 3 3 chr17 1308065 1308352 -88196201 + AluY SINE Alu 1 287 -24 719 218 106 12 chr17 1308353 1308552 -88196001 + MLT1A2 LTR MaLR 186 363 -11 2107 101 0 26 chr17 1308600 1308908 -88195645 + AluSx SINE Alu 1 300 -12 507 212 26 0 chr17 1308912 1309025 -88195528 - L1MB5 LINE L1 -54 6120 6005 2012 110 0 17 chr17 1311008 1311309 -88193244 + AluSx SINE Alu 1 296 -16 324 0 0 0 chr17 1311351 1311387 -88193166 + (TG)n Simple_repeat Simple_repeat 2 37 0 454 73 0 15 chr17 1311387 1311455 -88193098 - L1PA10 LINE L1 -20 6148 6082 1895 93 15 4 chr17 1311558 1311827 -88192726 + AluY SINE Alu 28 299 -12 1276 172 9 122 chr17 1311827 1312164 -88192389 + AluSx SINE Alu 2 300 -2 2156 106 3 3 chr17 1312203 1312505 -88192048 - AluSg SINE Alu -8 302 1 1206 234 38 3 chr17 1312506 1312796 -88191757 - AluJb SINE Alu -12 300 1 1530 142 48 62 chr17 1312804 1313113 -88191440 - AluJo SINE Alu -7 305 1 2200 128 0 0 chr17 1313137 1313449 -88191104 - AluSx SINE Alu 0 312 1 693 303 170 30 chr17 1313499 1313568 -88190985 + L2 LINE L2 2301 2359 -955 1822 138 3 33 chr17 1313568 1313697 -88190856 + AluJb SINE Alu 2 133 -179 2222 88 0 41 chr17 1313697 1314015 -88190538 + AluY SINE Alu 1 305 -6 1955 113 10 17 chr17 1314015 1314316 -88190237 + AluSg1 SINE Alu 1 299 -10 1822 138 3 33 chr17 1314316 1314490 -88190063 + AluJb SINE Alu 131 297 -15 693 303 170 30 chr17 1314490 1314984 -88189569 + L2 LINE L2 2359 2943 -371 1842 152 0 0 chr17 1315261 1315388 -88189165 + AluSx SINE Alu 5 131 -181 2228 95 13 0 chr17 1315388 1315693 -88188860 + AluSx SINE Alu 1 309 -3 1842 152 0 0 chr17 1315693 1315855 -88188698 + AluSx SINE Alu 130 294 -18 1230 252 125 6 chr17 1315862 1316215 -88188338 - MLT1H LTR MaLR -2 547 153 2141 94 3 16 chr17 1316282 1316589 -88187964 + AluY SINE Alu 1 303 -8 249 173 19 19 chr17 1316705 1316757 -88187796 - MLT1H LTR MaLR -388 161 74 1438 199 0 4 chr17 1316786 1317063 -88187490 - AluJb SINE Alu -8 304 29 1984 134 0 0 chr17 1317070 1317362 -88187191 - AluSx SINE Alu -19 293 2 220 200 46 46 chr17 1317393 1317458 -88187095 + MER91 DNA MER1_type 126 190 0 839 238 69 14 chr17 1317663 1317940 -88186613 + L1MB8 LINE L1 5881 6172 -6 774 138 9 0 chr17 1317984 1318100 -88186453 - AluSq/x SINE Alu -195 118 2 226 292 71 0 chr17 1318215 1318328 -88186225 + L1MC5 LINE L1 7299 7419 -542 1679 83 8 12 chr17 1318356 1318596 -88185957 + AluY SINE Alu 60 298 -13 2371 90 3 0 chr17 1318673 1318985 -88185568 + AluSp SINE Alu 1 313 0 1044 95 0 0 chr17 1319001 1319138 -88185415 + AluSq/x SINE Alu 1 137 -176 2104 121 0 3 chr17 1319138 1319436 -88185117 + AluSx SINE Alu 1 297 -15 328 319 55 61 chr17 1319440 1319603 -88184950 + L1 LINE L1 4006 4167 -1979 2413 38 10 0 chr17 1319607 1319900 -88184653 + AluY SINE Alu 1 296 -15 1267 84 0 0 chr17 1319900 1320067 -88184486 + AluY SINE Alu 133 299 -12 320 290 18 129 chr17 1320067 1320131 -88184422 + L1 LINE L1 4270 4340 -1806 840 145 8 0 chr17 1320131 1320262 -88184291 + FLAM_C SINE Alu 1 132 -1 320 290 18 129 chr17 1320262 1320315 -88184238 + L1 LINE L1 4340 4397 -1749 2508 68 0 0 chr17 1320315 1320622 -88183931 + AluSx SINE Alu 1 307 -5 320 290 18 129 chr17 1320622 1320727 -88183826 + L1 LINE L1 4397 4468 -1678 2298 81 10 0 chr17 1320747 1321045 -88183508 + AluSx SINE Alu 1 301 -11 808 114 0 0 chr17 1321124 1321238 -88183315 + AluSq/x SINE Alu 1 114 -199 2265 93 3 7 chr17 1322256 1322566 -88181987 - AluY SINE Alu -2 309 1 2021 134 0 0 chr17 1322568 1322858 -88181695 - AluSx SINE Alu -22 290 1 312 302 0 6 chr17 1323133 1323302 -88181251 + C-rich Low_complexity Low_complexity 2 169 0 220 319 0 0 chr17 1323345 1323464 -88181089 + C-rich Low_complexity Low_complexity 3 121 0 331 307 0 6 chr17 1323488 1323664 -88180889 + C-rich Low_complexity Low_complexity 2 176 0 371 268 0 17 chr17 1323688 1324049 -88180504 + C-rich Low_complexity Low_complexity 1 354 0 253 311 149 70 chr17 1324183 1325093 -88179460 + L2 LINE L2 1812 2804 -510 2010 143 0 0 chr17 1325093 1325393 -88179160 - AluSx SINE Alu -12 300 1 253 311 149 70 chr17 1325393 1325447 -88179106 + L2 LINE L2 2804 2852 -462 272 331 13 76 chr17 1325466 1325536 -88179017 + MIR SINE MIR 113 186 -76 2533 97 8 53 chr17 1325536 1325703 -88178850 + THE1C LTR MaLR 1 174 -201 1759 125 0 0 chr17 1325703 1325959 -88178594 - AluSq SINE Alu -13 300 45 1866 95 0 0 chr17 1325960 1326203 -88178350 - AluSq SINE Alu -65 248 6 2533 97 8 53 chr17 1326203 1326426 -88178127 + THE1C LTR MaLR 173 375 0 272 331 13 76 chr17 1326426 1326512 -88178041 + MIR SINE MIR 186 259 -3 1657 94 17 0 chr17 1326744 1327014 -88177539 + AluSp SINE Alu 58 313 0 372 287 45 85 chr17 1327069 1327536 -88177017 + L2 LINE L2 2581 3059 -213 2213 93 10 0 chr17 1327803 1328103 -88176450 + AluY SINE Alu 1 303 -8 348 298 41 0 chr17 1328666 1328787 -88175766 + MIR SINE MIR 111 236 -26 214 175 0 0 chr17 1328788 1328828 -88175725 + (CAT)n Simple_repeat Simple_repeat 2 41 0 1525 118 14 0 chr17 1329264 1329485 -88175068 - AluSc SINE Alu -9 300 77 2153 102 7 0 chr17 1329487 1329781 -88174772 - AluSg SINE Alu -14 296 1 199 324 29 0 chr17 1330643 1330711 -88173842 + MIR3 SINE MIR 1 70 -138 2232 89 6 16 chr17 1330976 1331292 -88173261 - AluSq SINE Alu 0 313 1 2107 125 3 0 chr17 1331303 1331608 -88172945 - AluSx SINE Alu -6 306 1 1012 84 0 0 chr17 1331611 1331742 -88172811 - AluSq/x SINE Alu -181 131 1 189 316 26 13 chr17 1332167 1332243 -88172310 + MIR SINE MIR 20 96 -166 2233 109 0 3 chr17 1332390 1332703 -88171850 - AluSx SINE Alu 0 312 1 379 280 68 25 chr17 1332713 1332831 -88171722 - MLT1K LTR MaLR -263 325 203 216 0 0 0 chr17 1335248 1335272 -88169281 + (CA)n Simple_repeat Simple_repeat 2 25 0 309 308 2 2 chr17 1335906 1336014 -88168539 + MIR SINE MIR 58 148 -60 871 195 13 0 chr17 1336063 1336222 -88168331 + AluJb SINE Alu 72 232 -80 276 268 0 0 chr17 1336403 1336474 -88168079 + L2 LINE L2 3200 3270 -2 421 309 85 0 chr17 1336562 1336727 -88167826 - MIR SINE MIR -23 239 61 604 99 0 44 chr17 1336818 1336909 -88167644 + AluSq/x SINE Alu 22 108 -205 2222 76 17 7 chr17 1336973 1337274 -88167279 - AluSq SINE Alu -9 304 1 296 309 41 8 chr17 1337854 1337977 -88166576 + MIR3 SINE MIR 33 159 -49 586 250 22 67 chr17 1337983 1338038 -88166515 - MER5B DNA MER1_type -6 172 116 2036 111 17 3 chr17 1338038 1338326 -88166227 + AluSg SINE Alu 1 292 -18 586 250 22 67 chr17 1338326 1338450 -88166103 - MER5B DNA MER1_type -62 116 1 464 202 237 0 chr17 1338470 1338614 -88165939 + MER5A DNA MER1_type 4 180 -9 2264 72 0 0 chr17 1338636 1338901 -88165652 + AluSg SINE Alu 22 311 0 205 40 0 0 chr17 1338901 1338926 -88165627 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 2146 109 7 23 chr17 1340241 1340544 -88164009 - AluSx SINE Alu -14 298 1 2207 102 3 29 chr17 1340908 1341223 -88163330 + AluSg SINE Alu 3 309 -1 385 133 0 0 chr17 1341224 1341284 -88163269 - HY3 scRNA scRNA -40 61 2 279 248 37 37 chr17 1341287 1341396 -88163157 - MLT1J LTR MaLR -294 217 109 1021 87 0 0 chr17 1341527 1341654 -88162899 + AluY SINE Alu 167 293 -18 253 343 0 0 chr17 1341668 1341735 -88162818 - L2 LINE L2 -1 3271 3205 190 298 18 0 chr17 1341826 1341883 -88162670 - L2 LINE L2 -252 3061 3004 2388 80 0 0 chr17 1342105 1342406 -88162147 + AluY SINE Alu 1 301 -10 1062 182 0 0 chr17 1342419 1342595 -88161958 + AluJb SINE Alu 137 312 0 309 279 23 0 chr17 1345360 1345446 -88159107 + MER103 DNA DNA 62 149 -17 2221 108 7 0 chr17 1345687 1345983 -88158570 - AluSx SINE Alu -11 301 4 2310 109 0 0 chr17 1347624 1347927 -88156626 - AluSg SINE Alu -7 303 1 2381 67 11 0 chr17 1348041 1348325 -88156228 - AluY SINE Alu -8 303 17 2503 69 0 0 chr17 1348873 1349163 -88155390 + AluSc SINE Alu 1 290 -19 309 281 49 0 chr17 1350075 1350157 -88154396 - L1ME4a LINE L1 -1 6120 6035 2441 81 0 0 chr17 1350170 1350468 -88154085 - AluSx SINE Alu -14 298 1 2209 110 0 3 chr17 1350815 1351116 -88153437 + AluSx SINE Alu 1 300 -12 2239 106 0 0 chr17 1351137 1351421 -88153132 + AluSg SINE Alu 1 284 -26 249 196 0 0 chr17 1351421 1351472 -88153081 + (CATATA)n Simple_repeat Simple_repeat 5 55 0 237 259 47 0 chr17 1351474 1351559 -88152994 + L1MC4 LINE L1 6614 6702 -1340 285 244 77 0 chr17 1351562 1351640 -88152913 + (TACG)n Simple_repeat Simple_repeat 4 87 0 265 322 0 0 chr17 1351640 1351730 -88152823 - L1MC4 LINE L1 -1339 6703 6614 343 177 21 104 chr17 1351730 1351826 -88152727 + L1MC4 LINE L1 6616 6703 -1339 333 337 11 0 chr17 1351799 1351894 -88152659 - L1MC4 LINE L1 -1340 6702 6607 * 357 24 0 0 chr17 1354182 1354224 -88150329 + (TG)n Simple_repeat Simple_repeat 1 42 0 441 36 0 0 chr17 1354322 1354377 -88150176 + (CAGCC)n Simple_repeat Simple_repeat 4 58 0 1582 161 0 0 chr17 1355097 1355339 -88149214 + AluJb SINE Alu 1 242 -70 1979 116 18 11 chr17 1355403 1355678 -88148875 + AluSx SINE Alu 1 277 -35 236 30 30 0 chr17 1355684 1355717 -88148836 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2299 120 3 0 chr17 1355786 1356094 -88148459 + AluSg SINE Alu 1 309 -1 1113 160 53 50 chr17 1356379 1356660 -88147893 + MER33 DNA MER1_type 1 282 -42 1441 86 0 0 chr17 1356662 1356836 -88147717 - AluSc SINE Alu -21 288 115 2491 81 0 0 chr17 1357307 1357617 -88146936 - AluSx SINE Alu -2 310 1 210 71 0 0 chr17 1358041 1358069 -88146484 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 2153 79 0 7 chr17 1358069 1358349 -88146204 - AluSg SINE Alu -32 278 1 1975 130 40 13 chr17 1359036 1359337 -88145216 - AluJb SINE Alu -3 309 1 323 243 37 28 chr17 1359337 1359388 -88145165 - Tigger8 DNA MER2_type -418 248 199 1876 101 4 26 chr17 1359388 1359656 -88144897 + AluSg SINE Alu 43 304 -6 323 243 37 28 chr17 1359656 1359711 -88144842 - Tigger8 DNA MER2_type -467 199 141 227 257 102 112 chr17 1359727 1359933 -88144620 + MIR SINE MIR 3 206 -56 1749 136 117 0 chr17 1360103 1360420 -88144133 + MER51B LTR ERV1 1 354 -23 2230 111 3 0 chr17 1360420 1360717 -88143836 + AluSq SINE Alu 1 298 -15 1150 120 14 14 chr17 1360717 1360925 -88143628 + L1P5 LINE L1 5322 5529 -622 2208 111 6 16 chr17 1360925 1361240 -88143313 + AluSx SINE Alu 1 312 0 955 84 8 0 chr17 1361241 1361360 -88143193 + AluSg/x SINE Alu 73 192 -118 1779 158 10 42 chr17 1361418 1361728 -88142825 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr17 1361729 1361751 -88142802 + (CA)n Simple_repeat Simple_repeat 1 22 0 698 247 93 53 chr17 1361753 1362121 -88142432 + L1ME3A LINE L1 4118 4503 -1643 2548 65 0 0 chr17 1362121 1362431 -88142122 + AluY SINE Alu 1 310 -1 1442 244 56 11 chr17 1362431 1362877 -88141676 + L1ME LINE L1 5358 5823 -343 635 75 0 0 chr17 1362909 1362989 -88141564 + AluY SINE Alu 216 295 -16 507 192 96 81 chr17 1362989 1363187 -88141366 + L1ME3A LINE L1 4553 4753 -1393 257 293 120 7 chr17 1363225 1363375 -88141178 + L1ME3A LINE L1 4906 5072 -1074 2534 73 3 0 chr17 1363375 1363676 -88140877 + AluSq SINE Alu 1 302 -11 1260 98 0 0 chr17 1363676 1363839 -88140714 + AluSg/x SINE Alu 132 294 -16 599 270 82 28 chr17 1363841 1364239 -88140314 + L1ME3A LINE L1 5063 5478 -700 1362 188 0 103 chr17 1364258 1364453 -88140100 + AluJo SINE Alu 12 163 -149 2143 70 10 34 chr17 1364453 1364751 -88139802 + AluSq SINE Alu 11 301 -12 1362 188 0 103 chr17 1364751 1364875 -88139678 + AluJo SINE Alu 163 298 -14 892 246 147 22 chr17 1364887 1365482 -88139071 + L1ME3A LINE L1 5495 6166 -4 2051 140 7 0 chr17 1365520 1365820 -88138733 + AluJb SINE Alu 1 302 -10 2557 66 0 0 chr17 1366350 1366654 -88137899 + AluY SINE Alu 1 304 -7 223 282 59 35 chr17 1366784 1366869 -88137684 + MIR SINE MIR 56 142 -120 2532 43 0 7 chr17 1366976 1367275 -88137278 - AluY SINE Alu -14 297 1 203 371 57 19 chr17 1367343 1367448 -88137105 - L3 LINE CR1 -1222 355 247 2072 90 6 56 chr17 1368028 1368351 -88136202 - AluSq SINE Alu -6 307 1 2400 77 7 0 chr17 1368372 1368670 -88135883 - AluY SINE Alu -11 300 1 185 174 0 22 chr17 1369911 1369957 -88134596 + G-rich Low_complexity Low_complexity 5 49 0 21 0 0 0 chr17 1370492 1370513 -88134040 + AT_rich Low_complexity Low_complexity 1 21 0 674 148 85 170 chr17 1371862 1371912 -88132641 + AluJo SINE Alu 86 139 -173 2182 121 0 16 chr17 1371912 1372225 -88132328 + AluY SINE Alu 2 309 -2 674 148 85 170 chr17 1372225 1372252 -88132301 + AluJo SINE Alu 139 167 -145 2183 77 23 40 chr17 1372252 1372552 -88132001 + AluY SINE Alu 1 295 -16 674 148 85 170 chr17 1372552 1372696 -88131857 + AluJo SINE Alu 167 289 -23 366 291 26 8 chr17 1373803 1373920 -88130633 - FLAM_A SINE Alu -7 126 8 2332 94 0 10 chr17 1373950 1374257 -88130296 + AluY SINE Alu 1 304 -7 1900 140 3 3 chr17 1374269 1374555 -88129998 + AluY SINE Alu 1 286 -25 2443 57 3 7 chr17 1374826 1375122 -88129431 - AluY SINE Alu -16 295 1 658 171 54 31 chr17 1375126 1375255 -88129298 - AluSq/x SINE Alu -180 133 2 603 93 23 0 chr17 1375566 1375652 -88128901 + AluY SINE Alu 16 103 -208 1982 130 0 23 chr17 1375886 1376185 -88128368 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr17 1376718 1376746 -88127807 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr17 1377416 1377442 -88127111 + AT_rich Low_complexity Low_complexity 1 26 0 215 139 83 0 chr17 1377829 1377865 -88126688 - MIR SINE MIR -183 79 41 243 359 0 0 chr17 1377865 1377929 -88126624 - MIR SINE MIR -185 77 14 208 275 107 124 chr17 1378636 1378660 -88125893 + MIR3 SINE MIR 28 51 -157 2186 102 3 13 chr17 1378660 1378964 -88125589 - AluSq SINE Alu -5 308 8 208 275 107 124 chr17 1378964 1379172 -88125381 + MIR3 SINE MIR 51 204 -4 673 264 24 0 chr17 1379303 1379470 -88125083 - MER20 DNA MER1_type -48 171 1 2458 61 0 7 chr17 1379636 1379932 -88124621 - AluY SINE Alu -17 294 1 811 188 137 21 chr17 1379980 1380214 -88124339 - Tigger7 DNA MER2_type 0 2491 2231 429 165 89 13 chr17 1381239 1381318 -88123235 + AluJ/FLAM SINE Alu 2 86 -226 2046 127 16 13 chr17 1381342 1381650 -88122903 + AluSc SINE Alu 1 309 0 1804 169 24 0 chr17 1381664 1381960 -88122593 + AluSx SINE Alu 1 303 -9 2379 107 3 0 chr17 1382067 1382376 -88122177 + AluSx SINE Alu 1 310 -2 677 252 83 12 chr17 1382473 1382727 -88121826 + L1ME1 LINE L1 5554 5825 -341 1502 199 62 7 chr17 1382733 1382950 -88121603 + AluJo SINE Alu 7 243 -69 309 119 194 0 chr17 1382950 1383017 -88121536 - MADE1 DNA Mariner 0 80 1 1502 199 62 7 chr17 1383017 1383071 -88121482 + AluJo SINE Alu 243 293 -19 495 283 69 0 chr17 1383087 1383306 -88121247 + L1ME1 LINE L1 5813 6056 -115 2234 101 0 39 chr17 1383379 1383511 -88121042 + AluSx SINE Alu 5 141 -171 2186 99 43 7 chr17 1383511 1383813 -88120740 + AluSp SINE Alu 1 313 0 2234 101 0 39 chr17 1383813 1383988 -88120565 + AluSx SINE Alu 141 300 -12 312 247 104 52 chr17 1384282 1384436 -88120117 + L1ME4a LINE L1 5959 6120 -1 859 167 44 56 chr17 1384564 1384627 -88119926 - L1MB8 LINE L1 -5 6173 6111 1990 122 24 0 chr17 1384627 1384915 -88119638 + AluSg SINE Alu 1 295 -15 859 167 44 56 chr17 1384915 1385102 -88119451 - L1MB8 LINE L1 -67 6111 5926 1247 121 56 5 chr17 1385106 1385321 -88119232 - Tigger1 DNA MER2_type 0 2418 2193 1728 202 0 10 chr17 1385739 1386041 -88118512 - AluJb SINE Alu -13 299 1 2554 72 0 0 chr17 1386297 1386602 -88117951 - AluY SINE Alu -6 305 1 2280 109 3 3 chr17 1386613 1386916 -88117637 - AluSp SINE Alu -10 303 1 230 263 97 26 chr17 1388190 1388304 -88116249 - MER94 DNA DNA 0 134 13 722 157 75 41 chr17 1388468 1388615 -88115938 + AluJo SINE Alu 2 153 -159 987 218 12 68 chr17 1388624 1388708 -88115845 + AluJb SINE Alu 51 138 -174 1371 201 115 0 chr17 1388708 1388987 -88115566 + AluJb SINE Alu 2 312 0 987 218 12 68 chr17 1388987 1389154 -88115399 + AluJb SINE Alu 138 288 -24 2221 128 0 0 chr17 1389340 1389637 -88114916 + AluSq SINE Alu 1 297 -16 1015 129 6 35 chr17 1389693 1389864 -88114689 + AluJb SINE Alu 1 166 -146 286 151 0 0 chr17 1389865 1389947 -88114606 + Alu SINE Alu 244 280 -20 886 168 0 0 chr17 1389977 1390120 -88114433 + AluJb SINE Alu 167 309 -3 1907 138 3 10 chr17 1390208 1390504 -88114049 - AluSx SINE Alu -18 294 1 238 362 51 29 chr17 1390858 1390996 -88113557 + MIR3 SINE MIR 7 147 -61 1299 155 92 67 chr17 1391102 1391386 -88113167 + AluJo SINE Alu 1 291 -21 2130 129 7 0 chr17 1391456 1391758 -88112795 + AluSx SINE Alu 1 304 -8 1123 89 0 0 chr17 1391882 1392017 -88112536 + AluSq/x SINE Alu 1 135 -178 2103 96 0 4 chr17 1392017 1392287 -88112266 + AluSx SINE Alu 1 269 -43 2309 80 3 3 chr17 1392611 1392899 -88111654 + AluSq SINE Alu 4 291 -22 2060 114 3 17 chr17 1392909 1393208 -88111345 + AluSx SINE Alu 1 295 -17 2104 73 15 0 chr17 1393433 1393694 -88110859 - AluSp SINE Alu -48 265 1 1855 120 84 4 chr17 1393696 1393971 -88110582 - AluSx SINE Alu -15 297 1 2119 95 20 3 chr17 1397378 1397674 -88106879 - AluSq SINE Alu 0 313 13 835 130 0 0 chr17 1397690 1397805 -88106748 + AluJb SINE Alu 178 292 -20 444 214 58 19 chr17 1397818 1397921 -88106632 - FLAM_A SINE Alu -32 110 4 11890 37 5 31 chr17 1398223 1399642 -88104911 - SVA Other Other 0 1386 5 2261 110 10 0 chr17 1399643 1399943 -88104610 - AluSx SINE Alu -9 303 1 2273 116 0 0 chr17 1400180 1400482 -88104071 + AluSg SINE Alu 1 302 -8 403 286 91 15 chr17 1400482 1400681 -88103872 - L2 LINE L2 -1325 1989 1776 1715 106 0 30 chr17 1401366 1401495 -88103058 + AluSx SINE Alu 3 123 -189 2228 114 0 19 chr17 1401495 1401811 -88102742 + AluSg SINE Alu 1 310 0 1715 106 0 30 chr17 1401811 1401917 -88102636 + AluSx SINE Alu 123 231 -81 1070 77 0 0 chr17 1401917 1402047 -88102506 + AluSg/x SINE Alu 169 298 -12 1681 161 16 39 chr17 1402098 1402409 -88102144 + AluJo SINE Alu 7 310 -2 1531 199 21 3 chr17 1402437 1402719 -88101834 + AluJo SINE Alu 11 297 -15 2143 117 3 0 chr17 1402719 1403010 -88101543 + AluSg SINE Alu 1 292 -18 601 146 68 0 chr17 1403164 1403267 -88101286 - AluSq/x SINE Alu -202 111 2 230 324 178 14 chr17 1403793 1403972 -88100581 - MIR SINE MIR -10 252 31 2189 91 52 0 chr17 1403972 1404259 -88100294 + AluSx SINE Alu 1 302 -10 230 324 178 14 chr17 1404259 1404292 -88100261 - MIR SINE MIR -231 31 5 1642 178 4 7 chr17 1404878 1405153 -88099400 - AluJb SINE Alu -23 289 16 2227 108 3 16 chr17 1405402 1405708 -88098845 - AluSq SINE Alu -11 302 1 2515 68 0 0 chr17 1406312 1406604 -88097949 - AluSq SINE Alu -21 292 1 998 133 0 26 chr17 1406746 1406897 -88097656 - FRAM SINE Alu -19 157 11 321 309 138 0 chr17 1407031 1407154 -88097399 + MIR SINE MIR 8 147 -115 1926 144 46 0 chr17 1407157 1407442 -88097111 + AluSx SINE Alu 1 298 -14 583 139 0 10 chr17 1407772 1407873 -88096680 + FLAM_A SINE Alu 35 134 -8 423 142 9 26 chr17 1407942 1408055 -88096498 + CT-rich Low_complexity Low_complexity 1 111 0 535 259 119 16 chr17 1408233 1408418 -88096135 + MIR SINE MIR 21 224 -38 921 149 0 50 chr17 1409292 1409453 -88095100 + FAM SINE Alu 10 162 -23 2290 212 73 10 chr17 1409561 1410036 -88094517 + L1MB8 LINE L1 5270 5792 -386 1991 107 27 23 chr17 1410036 1410335 -88094218 - AluSx SINE Alu -12 300 1 2290 212 73 10 chr17 1410335 1410463 -88094090 + L1MB8 LINE L1 5792 5911 -267 6153 158 47 37 chr17 1410524 1410686 -88093867 + Tigger1 DNA MER2_type 20 179 -2239 2371 76 0 13 chr17 1410686 1410988 -88093565 - AluY SINE Alu -13 298 1 6153 158 47 37 chr17 1410988 1411109 -88093444 + Tigger1 DNA MER2_type 179 297 -2121 2238 93 7 7 chr17 1411109 1411410 -88093143 - AluSp SINE Alu -12 301 1 6153 158 47 37 chr17 1411410 1411429 -88093124 + Tigger1 DNA MER2_type 297 314 -2104 1771 121 70 4 chr17 1411429 1411686 -88092867 - AluJb SINE Alu -24 288 15 6153 158 47 37 chr17 1411686 1412233 -88092320 + Tigger1 DNA MER2_type 314 891 -1527 2237 101 7 10 chr17 1412233 1412531 -88092022 + AluSg SINE Alu 1 297 -13 6153 158 47 37 chr17 1412531 1412984 -88091569 + Tigger1 DNA MER2_type 891 1338 -1080 1591 189 7 7 chr17 1412986 1413256 -88091297 + AluJb SINE Alu 1 270 -42 262 250 98 0 chr17 1413408 1413500 -88091053 - LTR67 LTR ERVL -7 550 450 2197 95 7 7 chr17 1413510 1413805 -88090748 + AluSx SINE Alu 5 299 -13 1227 85 0 0 chr17 1414142 1414295 -88090258 + AluSg/x SINE Alu 147 299 -11 2074 122 3 3 chr17 1414902 1415196 -88089357 + AluSx SINE Alu 1 294 -18 39 0 0 0 chr17 1415522 1415561 -88088992 + GC_rich Low_complexity Low_complexity 1 39 0 2398 63 6 22 chr17 1415804 1416120 -88088433 - AluSx SINE Alu -1 311 1 2253 96 6 13 chr17 1416921 1417235 -88087318 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 1418050 1418078 -88086475 + GC_rich Low_complexity Low_complexity 1 28 0 2334 89 6 19 chr17 1420322 1420638 -88083915 + AluSx SINE Alu 1 312 0 663 263 29 15 chr17 1420752 1420957 -88083596 + MIR SINE MIR 52 259 -3 1568 131 26 4 chr17 1421504 1421733 -88082820 - AluJb SINE Alu -78 234 1 2561 49 19 7 chr17 1421754 1422061 -88082492 - AluY SINE Alu 0 311 1 1463 109 0 19 chr17 1422112 1422323 -88082230 + AluSg/x SINE Alu 88 294 -18 410 177 8 0 chr17 1422509 1422633 -88081920 + (TG)n Simple_repeat Simple_repeat 1 125 0 303 140 35 0 chr17 1422811 1422868 -88081685 - AluS SINE Alu -227 74 16 1604 151 60 43 chr17 1423178 1423312 -88081241 + AluSx SINE Alu 1 131 -181 2275 81 0 3 chr17 1423312 1423597 -88080956 + AluY SINE Alu 1 284 -27 405 0 0 0 chr17 1423597 1423642 -88080911 + (CA)n Simple_repeat Simple_repeat 2 46 0 1604 151 60 43 chr17 1423642 1423805 -88080748 + AluSx SINE Alu 130 304 -8 1123 126 0 63 chr17 1424102 1424277 -88080276 + AluSx SINE Alu 1 164 -148 2273 94 7 10 chr17 1424413 1424547 -88080006 + AluY SINE Alu 1 134 -177 2783 32 0 0 chr17 1424547 1424856 -88079697 + AluY SINE Alu 1 309 -2 2273 94 7 10 chr17 1424856 1425028 -88079525 + AluY SINE Alu 134 306 -5 2105 122 0 28 chr17 1425069 1425390 -88079163 + AluSx SINE Alu 1 312 0 318 254 101 0 chr17 1425394 1425532 -88079021 + L1 LINE L1 5181 5332 -814 822 187 0 0 chr17 1425532 1425671 -88078882 + FLAM_C SINE Alu 1 139 -4 671 166 37 18 chr17 1625671 1625834 -87878719 + L1MB3 LINE L1 5976 6141 -42 2271 82 0 0 chr17 1625835 1626129 -87878424 + AluSx SINE Alu 1 294 -18 775 157 0 0 chr17 1626162 1626283 -87878270 - FRAM SINE Alu -14 162 42 789 174 8 8 chr17 1626336 1626468 -87878085 + FLAM_C SINE Alu 2 133 -10 2167 100 0 7 chr17 1626474 1626774 -87877779 + AluSg SINE Alu 3 300 -10 1241 159 4 41 chr17 1627038 1627308 -87877245 - AluSq SINE Alu -53 260 1 1679 164 20 7 chr17 1627522 1627827 -87876726 - AluJo SINE Alu -3 309 1 657 158 0 0 chr17 1627990 1628091 -87876462 + AluJ/FLAM SINE Alu 2 102 -210 809 131 0 8 chr17 1628295 1628425 -87876128 + AluSp/q SINE Alu 168 296 -17 954 150 131 77 chr17 1628425 1628567 -87875986 - AluJo SINE Alu -20 292 159 2059 115 0 10 chr17 1628567 1628880 -87875673 - AluSg SINE Alu 0 310 1 954 150 131 77 chr17 1628880 1628997 -87875556 - AluJo SINE Alu -153 159 19 339 252 36 29 chr17 1629130 1629269 -87875284 - L1M4 LINE L1 -985 5161 5022 895 97 15 15 chr17 1629269 1629403 -87875150 + AluSq/x SINE Alu 1 134 -179 1988 99 3 66 chr17 1629455 1629788 -87874765 - AluSx SINE Alu 0 312 1 232 301 54 0 chr17 1629887 1629980 -87874573 + L1MC4a LINE L1 6080 6177 -1631 486 154 240 29 chr17 1630010 1630114 -87874439 + AluJb SINE Alu 2 127 -185 2032 108 0 7 chr17 1630241 1630538 -87874015 - AluSx SINE Alu -17 295 1 932 67 7 22 chr17 1630541 1630676 -87873877 - AluSq/x SINE Alu -180 133 1 372 281 221 15 chr17 1630683 1631014 -87873539 + L2 LINE L2 1693 2091 -1223 2155 80 0 13 chr17 1631075 1631376 -87873177 - AluSc SINE Alu -12 297 1 783 176 5 93 chr17 1631475 1631626 -87872927 + AluJb SINE Alu 137 269 -43 2277 68 7 3 chr17 1631626 1631934 -87872619 + AluY SINE Alu 1 309 -2 783 176 5 93 chr17 1631934 1631975 -87872578 + AluJb SINE Alu 269 312 0 496 291 104 33 chr17 1632189 1632494 -87872059 + L2 LINE L2 2736 3061 -211 2234 88 3 3 chr17 1632558 1632864 -87871689 - AluSg SINE Alu -4 306 1 398 286 24 52 chr17 1633070 1633280 -87871273 - L2 LINE L2 -211 3061 2858 2353 67 3 0 chr17 1633609 1633907 -87870646 + AluSx SINE Alu 1 299 -13 296 292 18 44 chr17 1633912 1634025 -87870528 + L2 LINE L2 3163 3272 0 2128 105 0 7 chr17 1634136 1634441 -87870112 - AluY SINE Alu -8 303 1 715 183 0 30 chr17 1634728 1634859 -87869694 - FLAM_C SINE Alu -15 128 2 259 318 67 72 chr17 1634953 1635148 -87869405 + L2 LINE L2 3001 3194 -78 1070 136 28 0 chr17 1635152 1635329 -87869224 - AluSg/x SINE Alu 0 310 129 1996 116 0 7 chr17 1635334 1635650 -87868903 - AluSx SINE Alu 0 314 1 241 95 71 0 chr17 1635862 1635904 -87868649 + L2 LINE L2 3264 3308 -5 2178 100 6 3 chr17 1635981 1636292 -87868261 - AluSq SINE Alu -1 312 1 235 270 50 0 chr17 1636300 1636400 -87868153 - L1P LINE L1 -781 5370 5266 442 179 0 13 chr17 1636559 1636637 -87867916 - FLAM_A SINE Alu -17 125 49 1758 159 37 7 chr17 1636702 1636997 -87867556 + AluJb SINE Alu 1 304 -8 248 268 0 18 chr17 1637012 1637068 -87867485 + AluSg/x SINE Alu 124 178 -122 327 167 95 36 chr17 1637137 1637221 -87867332 - L1MA9 LINE L1 0 6312 6224 2136 105 39 60 chr17 1637369 1637588 -87866965 - THE1C LTR MaLR -2 373 164 1912 137 0 19 chr17 1637588 1637903 -87866650 + AluSx SINE Alu 3 311 -1 2136 105 39 60 chr17 1637903 1638064 -87866489 - THE1C LTR MaLR -211 164 1 2080 113 0 0 chr17 1638159 1638451 -87866102 - AluSx SINE Alu -20 292 1 699 281 186 30 chr17 1638474 1638872 -87865681 - MLT1K LTR MaLR -10 578 119 791 271 42 42 chr17 1639018 1639093 -87865460 - L1M4 LINE L1 -1440 4706 4632 2186 63 0 78 chr17 1639093 1639427 -87865126 - AluY SINE Alu -3 308 1 791 271 42 42 chr17 1639427 1639728 -87864825 - L1M4 LINE L1 -1513 4633 4330 1124 107 0 34 chr17 1639751 1639928 -87864625 + AluSq SINE Alu 1 171 -142 892 239 83 73 chr17 1640108 1640267 -87864286 - HAL1 LINE L1 -5 2502 2346 1726 131 0 64 chr17 1640267 1640581 -87863972 - AluSx SINE Alu -18 294 1 2002 117 0 13 chr17 1640581 1640879 -87863674 - AluSx SINE Alu -18 294 1 892 239 83 73 chr17 1640879 1640990 -87863563 - HAL1 LINE L1 -161 2346 2238 1946 127 3 7 chr17 1640990 1641298 -87863255 - AluSp SINE Alu -6 307 1 892 239 83 73 chr17 1641298 1641544 -87863009 - HAL1 LINE L1 -269 2238 1979 1419 269 56 87 chr17 1641922 1641993 -87862560 + L1MC4 LINE L1 6875 6947 -1095 1553 165 3 32 chr17 1641993 1642302 -87862251 + AluJo SINE Alu 1 300 -12 1419 269 56 87 chr17 1642302 1642455 -87862098 + L1MC4 LINE L1 6947 7103 -939 2025 125 0 3 chr17 1642455 1642752 -87861801 + AluSx SINE Alu 1 296 -16 1419 269 56 87 chr17 1642752 1643166 -87861387 + L1MC4 LINE L1 7103 7529 -513 2152 106 0 0 chr17 1643166 1643469 -87861084 - AluSx SINE Alu -9 303 1 1419 269 56 87 chr17 1643469 1643596 -87860957 + L1MC4 LINE L1 7529 7658 -384 1400 143 68 34 chr17 1643596 1643889 -87860664 + AluJo SINE Alu 1 303 -9 1419 269 56 87 chr17 1643889 1644198 -87860355 + L1MC4 LINE L1 7658 7918 -124 311 224 247 52 chr17 1644198 1644372 -87860181 + LTR50 LTR ERVL 1 208 -587 856 170 78 61 chr17 1644387 1644481 -87860072 + L1M4 LINE L1 4934 5025 -1121 2185 60 23 10 chr17 1644481 1644780 -87859773 - AluY SINE Alu -8 303 1 856 170 78 61 chr17 1644780 1644915 -87859638 + L1M4 LINE L1 5025 5167 -979 1651 116 27 37 chr17 1644916 1645210 -87859343 + AluJb SINE Alu 1 291 -21 906 68 0 23 chr17 1645218 1645351 -87859202 + AluSq/x SINE Alu 1 130 -182 2230 97 7 0 chr17 1645478 1645787 -87858766 + AluY SINE Alu 1 311 0 2247 74 3 7 chr17 1645803 1646113 -87858440 + AluY SINE Alu 1 309 -2 432 0 0 0 chr17 1646444 1646492 -87858061 + (TA)n Simple_repeat Simple_repeat 2 49 0 387 133 0 112 chr17 1646494 1646592 -87857961 - LTR9 LTR ERV1 -90 522 436 2114 74 10 10 chr17 1646592 1646889 -87857664 - AluY SINE Alu -14 297 1 477 240 4 28 chr17 1646897 1647036 -87857517 + L1MD2 LINE L1 6235 7983 -12 1593 168 13 35 chr17 1647351 1647526 -87857027 - AluJo SINE Alu -9 303 137 2110 93 0 60 chr17 1647526 1647859 -87856694 - AluSp SINE Alu 0 313 1 1593 168 13 35 chr17 1647859 1647993 -87856560 - AluJo SINE Alu -175 137 1 246 32 0 0 chr17 1647996 1648027 -87856526 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 641 188 0 0 chr17 1648041 1648142 -87856411 - AluJ/FLAM SINE Alu -210 102 2 289 113 31 216 chr17 1648144 1648241 -87856312 - AluJo SINE Alu -159 143 65 854 107 0 0 chr17 1648256 1648378 -87856175 + AluSg/x SINE Alu 176 297 -15 406 93 0 0 chr17 1648379 1648433 -87856120 + Alu SINE Alu 2 55 -256 1897 97 3 58 chr17 1649720 1650030 -87854523 - AluY SINE Alu -18 293 1 2262 50 0 31 chr17 1650084 1650405 -87854148 + AluY SINE Alu 1 311 0 1832 140 0 37 chr17 1650420 1650741 -87853812 + AluSx SINE Alu 1 309 -3 351 267 168 31 chr17 1651158 1651319 -87853234 + MLT1K LTR MaLR 315 497 -91 795 163 0 8 chr17 1651327 1651456 -87853097 - FLAM_C SINE Alu -5 128 1 1384 171 36 26 chr17 1653027 1653331 -87851222 + AluJo SINE Alu 1 307 -5 1919 101 14 20 chr17 1653417 1653714 -87850839 + AluY SINE Alu 1 295 -16 1892 119 10 13 chr17 1654068 1654370 -87850183 + AluSx SINE Alu 1 301 -11 2252 97 0 3 chr17 1654449 1654760 -87849793 + AluSx SINE Alu 1 310 -2 1743 112 4 14 chr17 1655494 1655770 -87848783 - AluSg SINE Alu -7 303 31 1903 42 36 46 chr17 1655831 1656137 -87848416 + AluY SINE Alu 2 304 -7 377 210 49 0 chr17 1656607 1656688 -87847865 + L1ME LINE L1 5529 5613 -508 1011 139 0 18 chr17 1656741 1656906 -87847647 + FRAM SINE Alu 1 162 -4 2231 57 10 14 chr17 1657047 1657343 -87847210 - AluY SINE Alu -16 295 1 1629 151 21 0 chr17 1657371 1657662 -87846891 + AluSg SINE Alu 1 297 -13 423 227 62 39 chr17 1657793 1657921 -87846632 - L1MB7 LINE L1 -10 6174 6044 1362 172 50 17 chr17 1657930 1658227 -87846326 - AluJb SINE Alu -5 307 1 243 259 82 12 chr17 1658341 1658426 -87846127 - MLT1H LTR MaLR -50 499 409 973 230 65 21 chr17 1658458 1658749 -87845804 - MLT1H LTR MaLR -245 304 1 1166 114 12 0 chr17 1658844 1659010 -87845543 - AluSq SINE Alu -19 294 127 831 112 0 0 chr17 1659011 1659136 -87845417 + (TA)n Simple_repeat Simple_repeat 1 125 0 2265 78 0 34 chr17 1659136 1659458 -87845095 - AluY SINE Alu 0 311 1 288 293 99 26 chr17 1659787 1659978 -87844575 - L1M4 LINE L1 -1466 4680 4476 294 352 7 7 chr17 1659982 1660124 -87844429 - L1M4 LINE L1 -2313 3833 3692 483 91 0 0 chr17 1660239 1660305 -87844248 - FLAM SINE Alu -32 111 46 208 62 0 31 chr17 1660305 1660337 -87844216 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 276 77 0 0 chr17 1660363 1660402 -87844151 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 307 167 0 0 chr17 1660403 1660451 -87844102 - AluS SINE Alu -26 274 227 357 62 0 0 chr17 1660451 1660499 -87844054 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1821 117 0 18 chr17 1660500 1660781 -87843772 - AluSx SINE Alu -36 276 1 225 0 0 0 chr17 1660787 1660812 -87843741 + (T)n Simple_repeat Simple_repeat 1 25 0 388 231 51 8 chr17 1660905 1661022 -87843531 - L1ME4a LINE L1 -45 6076 5955 1751 140 3 29 chr17 1661180 1661487 -87843066 - AluJo SINE Alu -12 300 2 2079 94 0 17 chr17 1661496 1661793 -87842760 - AluSc SINE Alu -17 292 1 2268 93 0 0 chr17 1662789 1663090 -87841463 + AluSx SINE Alu 1 301 -11 1393 139 154 23 chr17 1663209 1663475 -87841078 - AluJb SINE Alu -1 301 1 845 128 0 47 chr17 1663553 1663688 -87840865 + FLAM_C SINE Alu 1 130 -182 1928 144 10 7 chr17 1663688 1663994 -87840559 + AluSx SINE Alu 1 307 -5 845 128 0 47 chr17 1663994 1664007 -87840546 + FLAM_C SINE Alu 130 142 -170 2206 56 42 7 chr17 1664065 1664352 -87840201 + AluY SINE Alu 1 297 -14 259 282 24 12 chr17 1664367 1664452 -87840101 - MIR SINE MIR -80 182 97 1003 106 0 59 chr17 1664566 1664736 -87839817 - AluSc SINE Alu -148 161 2 2217 79 0 13 chr17 1666306 1666610 -87837943 - AluY SINE Alu -11 300 1 180 0 0 0 chr17 1666696 1666716 -87837837 + (A)n Simple_repeat Simple_repeat 1 20 0 232 156 0 0 chr17 1666866 1666911 -87837642 + Alu SINE Alu 256 300 0 711 262 59 0 chr17 1666924 1667111 -87837442 + MIR SINE MIR 65 262 0 1703 166 13 10 chr17 1667130 1667437 -87837116 + AluJo SINE Alu 5 312 0 1809 81 37 7 chr17 1667794 1668094 -87836459 + AluSg SINE Alu 1 308 0 1926 98 13 36 chr17 1668430 1668735 -87835818 - AluSq SINE Alu -15 298 1 1919 114 21 7 chr17 1668823 1669113 -87835440 - AluSc SINE Alu -15 294 1 1903 117 21 24 chr17 1669120 1669410 -87835143 - AluSx SINE Alu -23 289 1 312 225 42 108 chr17 1669670 1669790 -87834763 + MIR SINE MIR 15 126 -136 402 276 68 44 chr17 1669936 1670073 -87834480 + L1ME LINE L1 5307 5452 -669 1538 140 51 27 chr17 1670073 1670365 -87834188 + AluSx SINE Alu 1 299 -13 402 276 68 44 chr17 1670365 1670408 -87834145 + L1ME LINE L1 5452 5492 -629 1910 135 0 10 chr17 1670471 1670767 -87833786 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr17 1670767 1670796 -87833757 + AT_rich Low_complexity Low_complexity 1 29 0 2022 45 0 11 chr17 1670867 1671131 -87833422 - AluY SINE Alu -12 299 39 1475 253 54 83 chr17 1671150 1671844 -87832709 + L1MC4a LINE L1 5011 5724 -430 2122 105 3 0 chr17 1671844 1672140 -87832413 - AluSx SINE Alu -15 297 1 1475 253 54 83 chr17 1672140 1672280 -87832273 + L1MC4a LINE L1 5724 5343 -811 1609 111 0 137 chr17 1672280 1672622 -87831931 - AluSx SINE Alu -7 295 1 1475 253 54 83 chr17 1672622 1672729 -87831824 + L1MC4a LINE L1 5342 5451 -703 1375 274 116 18 chr17 1672901 1673520 -87831033 + L1ME4a LINE L1 5445 6120 -1 788 154 15 8 chr17 1674008 1674138 -87830415 - FLAM_C SINE Alu -11 132 2 2378 52 0 7 chr17 1674317 1674638 -87829915 - AluSg SINE Alu 0 319 1 2195 61 29 0 chr17 1674646 1674926 -87829627 - AluY SINE Alu -23 288 1 909 116 0 0 chr17 1674939 1675060 -87829493 - FLAM_C SINE Alu -12 121 1 1028 137 25 6 chr17 1675284 1675445 -87829108 + AluSx SINE Alu 61 224 -88 1137 151 16 68 chr17 1675445 1675522 -87829031 - AluJo SINE Alu -73 239 160 4678 138 44 5 chr17 1675522 1676278 -87828275 + LTR1 LTR ERV1 1 785 0 1137 151 16 68 chr17 1676278 1676452 -87828101 - AluJo SINE Alu -152 160 1 1994 142 0 0 chr17 1676614 1676916 -87827637 + AluSx SINE Alu 1 302 -10 1372 144 0 25 chr17 1677271 1677507 -87827046 - AluJb SINE Alu -24 288 59 2138 111 7 3 chr17 1677514 1677821 -87826732 - AluSx SINE Alu -4 308 1 2036 128 0 0 chr17 1677919 1678215 -87826338 - AluSx SINE Alu -16 296 1 413 141 99 91 chr17 1678332 1678403 -87826150 + L1MC4 LINE L1 7921 7995 -47 1698 141 24 14 chr17 1678403 1678693 -87825860 - AluSx SINE Alu -19 293 1 413 141 99 91 chr17 1678693 1678742 -87825811 + L1MC4 LINE L1 7995 8042 0 382 219 109 17 chr17 1678881 1679000 -87825553 + L1M4 LINE L1 2784 2913 -3233 2194 101 0 13 chr17 1679231 1679547 -87825006 - AluSx SINE Alu 0 312 1 841 123 8 0 chr17 1679550 1679680 -87824873 - AluSq/x SINE Alu -182 131 1 1907 123 24 7 chr17 1681770 1682062 -87822491 + AluSq SINE Alu 1 297 -16 2327 93 0 3 chr17 1682705 1683016 -87821537 - AluSx SINE Alu -2 310 1 1284 157 31 100 chr17 1683016 1683180 -87821373 - AluSq SINE Alu -5 298 165 225 0 0 0 chr17 1683180 1683205 -87821348 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1284 157 31 100 chr17 1683205 1683359 -87821194 - AluSq SINE Alu -138 165 2 1206 127 0 64 chr17 1683529 1683812 -87820741 - AluSq SINE Alu -11 302 38 194 318 14 99 chr17 1684178 1684401 -87820152 + L2 LINE L2 2858 3061 -211 539 303 134 70 chr17 1685243 1685774 -87818779 + L2 LINE L2 1616 2230 -1084 1702 103 0 26 chr17 1685774 1686047 -87818506 - AluSx SINE Alu -46 266 1 539 303 134 70 chr17 1686047 1686423 -87818130 + L2 LINE L2 2230 2581 -733 2327 70 0 3 chr17 1686587 1686885 -87817668 - AluY SINE Alu -14 297 1 1780 104 0 83 chr17 1686885 1687222 -87817331 - AluSx SINE Alu -3 309 1 2182 107 0 0 chr17 1687378 1687678 -87816875 - AluSx SINE Alu -12 300 1 532 273 116 12 chr17 1687683 1687855 -87816698 + MIR SINE MIR 71 260 -2 22 0 0 0 chr17 1687892 1687914 -87816639 + AT_rich Low_complexity Low_complexity 1 22 0 1808 119 0 14 chr17 1687915 1688221 -87816332 - AluSg SINE Alu 0 302 1 399 232 8 72 chr17 1688231 1688356 -87816197 + L2 LINE L2 3197 3313 0 1955 124 24 7 chr17 1688569 1688867 -87815686 + AluSp SINE Alu 1 303 -10 1930 122 14 0 chr17 1688898 1689192 -87815361 + AluSx SINE Alu 1 298 -14 916 137 0 0 chr17 1689224 1689355 -87815198 - FLAM_C SINE Alu -2 131 1 331 212 111 12 chr17 1689717 1689808 -87814745 - MIR SINE MIR -20 188 89 1533 163 46 14 chr17 1689873 1690156 -87814397 - AluSx SINE Alu -20 292 1 1375 166 3 62 chr17 1690160 1690468 -87814085 - AluJo SINE Alu -22 290 1 2165 104 24 6 chr17 1690468 1690805 -87813748 - HSMAR2 DNA Mariner -958 344 2 669 172 0 33 chr17 1690852 1690974 -87813579 + FLAM_C SINE Alu 1 118 -15 1765 129 22 7 chr17 1691122 1691423 -87813130 - AluSx SINE Alu 0 305 1 2373 201 50 56 chr17 1691424 1691681 -87812872 - L1ME2 LINE L1 -34 6130 5873 1462 163 13 60 chr17 1691681 1691855 -87812698 - AluJo SINE Alu -18 294 138 2172 91 0 7 chr17 1691855 1692153 -87812400 - AluSc SINE Alu -13 296 1 1462 163 13 60 chr17 1692153 1692278 -87812275 - AluJo SINE Alu -174 138 9 2373 201 50 56 chr17 1692278 1693028 -87811525 - L1ME2 LINE L1 -291 5873 5120 2191 93 6 3 chr17 1693028 1693340 -87811213 + AluSq SINE Alu 1 313 0 2203 94 3 0 chr17 1693346 1693645 -87810908 + AluSp SINE Alu 5 304 -9 2373 201 50 56 chr17 1693645 1693862 -87810691 - L1ME2 LINE L1 -1049 5115 4865 2191 72 0 35 chr17 1693862 1694181 -87810372 - AluY SINE Alu -3 308 1 2373 201 50 56 chr17 1694181 1694348 -87810205 - L1ME2 LINE L1 -1299 4865 4699 1204 141 9 18 chr17 1694371 1694598 -87809955 - AluSx SINE Alu -29 283 59 257 274 61 61 chr17 1694653 1694898 -87809655 - L1ME2 LINE L1 -1958 4188 3944 464 139 0 0 chr17 1695380 1695452 -87809101 + AluS SINE Alu 2 73 -240 1982 96 13 20 chr17 1695466 1695768 -87808785 - AluY SINE Alu -11 300 1 460 283 75 0 chr17 1695768 1695927 -87808626 - L1M4 LINE L1 -1270 4876 4706 2136 117 3 0 chr17 1695929 1696238 -87808315 - AluSx SINE Alu -2 310 1 756 164 14 29 chr17 1696248 1696388 -87808165 - FRAM SINE Alu -15 161 24 1681 153 11 0 chr17 1696401 1696676 -87807877 - AluJb SINE Alu -3 309 32 1507 171 21 7 chr17 1696750 1696912 -87807641 - AluJo SINE Alu -13 299 130 2027 107 0 0 chr17 1696912 1697193 -87807360 - AluY SINE Alu -22 289 9 1507 171 21 7 chr17 1697193 1697316 -87807237 - AluJo SINE Alu -182 130 10 2032 213 95 131 chr17 1697328 1697399 -87807154 - L1M4 LINE L1 -1679 4467 4395 1984 121 13 10 chr17 1697399 1697706 -87806847 + AluSx SINE Alu 1 308 -4 2032 213 95 131 chr17 1697706 1697916 -87806637 - L1M4 LINE L1 -1751 4395 4179 1988 119 20 3 chr17 1697916 1698219 -87806334 - AluSx SINE Alu -4 308 1 2032 213 95 131 chr17 1698219 1698655 -87805898 - L1M4 LINE L1 -1967 4179 3682 715 141 16 25 chr17 1698655 1698776 -87805777 - FLAM_C SINE Alu -15 128 9 2032 213 95 131 chr17 1698776 1699132 -87805421 - L1M4 LINE L1 -2464 3682 3315 203 313 167 0 chr17 1699881 1699977 -87804576 - MER5A DNA MER1_type -1 188 77 213 303 107 73 chr17 1700022 1700237 -87804316 + L2 LINE L2 3021 3246 -26 405 0 0 0 chr17 1700237 1700282 -87804271 + (TTA)n Simple_repeat Simple_repeat 2 46 0 213 303 107 73 chr17 1700282 1700300 -87804253 + L2 LINE L2 3246 3262 -10 820 133 0 30 chr17 1701604 1701739 -87802814 - AluSq/x SINE Alu -180 132 2 351 0 0 0 chr17 1701814 1701853 -87802700 + (TG)n Simple_repeat Simple_repeat 2 40 0 1355 190 3 33 chr17 1701916 1702221 -87802332 + AluJo SINE Alu 9 304 -8 1094 135 0 16 chr17 1702363 1702548 -87802005 + AluSq SINE Alu 54 235 -78 1440 191 3 24 chr17 1702654 1702952 -87801601 + AluJo SINE Alu 13 304 -8 1531 198 0 6 chr17 1703040 1703353 -87801200 + AluJb SINE Alu 1 311 -1 643 175 175 35 chr17 1703467 1703695 -87800858 - HAL1b LINE L1 -702 646 387 1805 105 16 35 chr17 1703705 1704020 -87800533 - AluY SINE Alu -2 309 1 1834 95 46 18 chr17 1705149 1705433 -87799120 + AluSg SINE Alu 1 292 -18 856 231 64 8 chr17 1705443 1705677 -87798876 + L1MB7 LINE L1 5937 6183 -1 1920 90 4 11 chr17 1705742 1706009 -87798544 + AluSx SINE Alu 1 265 -47 1817 118 0 8 chr17 1706017 1706279 -87798274 - AluSg1 SINE Alu -49 260 1 1341 221 47 9 chr17 1706281 1706598 -87797955 - L1M4 LINE L1 -362 5822 5494 2525 49 0 0 chr17 1706702 1707008 -87797545 - AluY SINE Alu -4 307 2 400 326 144 26 chr17 1707009 1707279 -87797274 - L1M4 LINE L1 -1955 4191 3890 2251 102 0 0 chr17 1707307 1707602 -87796951 + AluSx SINE Alu 1 295 -17 1898 114 3 23 chr17 1707668 1707967 -87796586 + AluSx SINE Alu 1 293 -19 2068 104 14 0 chr17 1708042 1708329 -87796224 + AluSx SINE Alu 11 301 -11 1347 197 71 94 chr17 1708353 1708961 -87795592 - L1MC5 LINE L1 -30 7931 7338 451 246 143 29 chr17 1708964 1709139 -87795414 - L1M4 LINE L1 -2364 3782 3588 280 314 133 54 chr17 1709567 1710009 -87794544 - L2 LINE L2 -10 3303 2827 1923 129 0 10 chr17 1710838 1711133 -87793420 + AluSx SINE Alu 7 298 -14 181 264 0 38 chr17 1711394 1711447 -87793106 + L2 LINE L2 3222 3272 0 1264 189 4 15 chr17 1711871 1712131 -87792422 + AluJo SINE Alu 16 272 -40 395 337 51 10 chr17 1712151 1712347 -87792206 + L1M4 LINE L1 5189 5392 -754 2244 233 33 75 chr17 1712364 1712615 -87791938 - L1MEc LINE L1 -2056 4159 3899 1654 115 39 0 chr17 1712615 1712775 -87791778 - AluSx SINE Alu -19 293 118 300 27 0 0 chr17 1712775 1712812 -87791741 + (TG)n Simple_repeat Simple_repeat 2 38 0 1654 115 39 0 chr17 1712812 1712911 -87791642 - AluSx SINE Alu -194 118 24 2244 233 33 75 chr17 1712911 1713420 -87791133 - L1MEc LINE L1 -2316 3899 3431 1322 161 106 25 chr17 1713487 1713761 -87790792 + AluJb SINE Alu 1 296 -16 1856 120 0 20 chr17 1713761 1714060 -87790493 + AluSg SINE Alu 1 294 -16 28 111 0 0 chr17 1714066 1714147 -87790406 + AT_rich Low_complexity Low_complexity 1 81 0 826 107 0 9 chr17 1714147 1714259 -87790294 - AluSq/x SINE Alu -179 133 23 1258 202 86 5 chr17 1714326 1714697 -87789856 - L1MEc LINE L1 -2907 3308 2908 234 91 0 0 chr17 1714698 1714731 -87789822 + (T)n Simple_repeat Simple_repeat 1 33 0 2009 124 0 13 chr17 1715922 1716220 -87788333 - AluSx SINE Alu -13 299 6 1904 209 54 14 chr17 1716222 1716324 -87788229 - L1MEc LINE L1 -3287 2928 2832 1919 136 0 3 chr17 1716324 1716666 -87787887 - AluSx SINE Alu 0 341 1 1904 209 54 14 chr17 1716666 1717078 -87787475 - L1MEc LINE L1 -3383 2832 2392 1363 177 0 61 chr17 1717079 1717263 -87787290 - AluJb SINE Alu -1 311 117 180 97 0 0 chr17 1717263 1717294 -87787259 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2027 89 4 4 chr17 1717294 1717565 -87786988 - AluSc SINE Alu -28 281 11 1363 177 0 61 chr17 1717565 1717689 -87786864 - AluJb SINE Alu -193 119 21 834 147 61 25 chr17 1717747 1717910 -87786643 - AluJo SINE Alu -142 170 2 2507 271 46 21 chr17 1717910 1718758 -87785795 - L1MEc LINE L1 -5241 1155 287 565 296 8 46 chr17 1718948 1719188 -87785365 - HAL1 LINE L1 -25 2482 2252 1595 132 26 58 chr17 1719201 1719367 -87785186 - AluJo SINE Alu -11 301 148 2081 80 30 13 chr17 1719367 1719669 -87784884 - AluY SINE Alu -4 307 1 1595 132 26 58 chr17 1719669 1719813 -87784740 - AluJo SINE Alu -164 148 1 1913 132 4 0 chr17 1719891 1720197 -87784356 - AluSx SINE Alu 0 307 1 2237 73 16 7 chr17 1720197 1720499 -87784054 - AluSq SINE Alu -7 306 1 1396 183 20 40 chr17 1720503 1720666 -87783887 - AluJb SINE Alu -10 302 137 387 0 0 0 chr17 1720666 1720709 -87783844 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2162 77 3 3 chr17 1720709 1720994 -87783559 - AluSx SINE Alu -27 285 1 1396 183 20 40 chr17 1720994 1721129 -87783424 - AluJb SINE Alu -173 139 9 2134 105 0 10 chr17 1721738 1722042 -87782511 + AluSq SINE Alu 2 302 -11 1752 87 4 16 chr17 1722155 1722408 -87782145 + AluSx SINE Alu 55 304 -8 279 203 101 29 chr17 1722408 1722477 -87782076 + AluSc SINE Alu 132 205 -94 242 281 104 67 chr17 1722591 1722726 -87781827 - MIR3 SINE MIR -9 199 60 343 266 60 54 chr17 1723091 1723275 -87781278 - L1MC4a LINE L1 -1748 6060 5876 822 191 0 0 chr17 1723298 1723424 -87781129 - FLAM_C SINE Alu -16 127 2 1693 168 0 13 chr17 1723450 1723753 -87780800 + AluJb SINE Alu 1 299 -13 1989 112 6 22 chr17 1723804 1724116 -87780437 - AluSx SINE Alu -5 307 1 850 122 0 41 chr17 1724117 1724264 -87780289 - AluSq/x SINE Alu -172 141 1 183 42 0 0 chr17 1724837 1724861 -87779692 + (TG)n Simple_repeat Simple_repeat 2 25 0 1679 178 0 19 chr17 1724929 1725244 -87779309 + AluJo SINE Alu 1 309 -3 1252 191 10 54 chr17 1725308 1725622 -87778931 + AluJb SINE Alu 3 302 0 1530 118 118 19 chr17 1726009 1726280 -87778273 + AluSg SINE Alu 1 298 -12 2084 86 0 20 chr17 1726781 1727084 -87777469 + AluSq SINE Alu 1 297 -16 502 316 62 29 chr17 1727549 1727793 -87776760 + MIR SINE MIR 11 262 0 1235 172 28 16 chr17 1727987 1728237 -87776316 - L1MB3 LINE L1 -7 6176 5924 1384 170 147 8 chr17 1730277 1730542 -87774011 - AluJo SINE Alu 0 302 1 2173 119 0 13 chr17 1731275 1731585 -87772968 + AluSx SINE Alu 1 306 -6 329 0 0 24 chr17 1731585 1731627 -87772926 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 0 0 30 chr17 1731626 1731659 -87772894 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 1710 149 13 30 chr17 1731818 1732119 -87772434 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 1732228 1732249 -87772304 + AT_rich Low_complexity Low_complexity 1 21 0 2102 120 0 10 chr17 1733895 1734203 -87770350 + AluSx SINE Alu 1 305 -7 1939 126 0 23 chr17 1735577 1735879 -87768674 + AluSx SINE Alu 2 296 -16 1783 132 16 46 chr17 1740057 1740360 -87764193 + AluSx SINE Alu 1 294 -18 217 267 0 67 chr17 1740887 1740962 -87763591 - MIR SINE MIR -79 129 60 1357 95 11 0 chr17 1741666 1741855 -87762698 - AluSg/x SINE Alu -18 294 104 2108 71 0 14 chr17 1741855 1742136 -87762417 - AluSg SINE Alu -33 277 1 344 93 0 0 chr17 1742142 1742196 -87762357 - Alu SINE Alu -7 294 241 227 351 0 0 chr17 1742203 1742280 -87762273 + L2 LINE L2 3232 3308 -5 1967 85 50 7 chr17 1742430 1742712 -87761841 + AluSx SINE Alu 2 295 -17 327 250 179 18 chr17 1742724 1743090 -87761463 + L2 LINE L2 2765 3191 -122 474 266 112 115 chr17 1745047 1745333 -87759220 + L2 LINE L2 2985 3269 -3 2185 105 3 10 chr17 1745338 1745652 -87758901 - AluSx SINE Alu 0 312 1 1492 174 60 11 chr17 1745652 1745934 -87758619 - AluJb SINE Alu -15 297 2 2141 108 0 13 chr17 1746704 1747010 -87757543 + AluSq SINE Alu 1 302 -11 201 313 30 0 chr17 1747076 1747143 -87757410 + MIR SINE MIR 70 138 -70 2122 80 0 21 chr17 1747283 1747593 -87756960 - AluY SINE Alu 0 304 1 2127 105 0 13 chr17 1747593 1747898 -87756655 - AluSq SINE Alu -12 301 1 2169 90 3 39 chr17 1748481 1748622 -87755931 + AluSx SINE Alu 1 145 -167 2045 81 3 14 chr17 1748622 1748929 -87755624 + AluSc SINE Alu 1 304 0 2169 90 3 39 chr17 1748929 1749096 -87755457 + AluSx SINE Alu 145 299 -13 567 120 0 22 chr17 1749372 1749464 -87755089 + AluS SINE Alu 1 90 -222 1123 112 0 0 chr17 1749464 1749625 -87754928 - AluSg/x SINE Alu -18 294 134 1721 152 3 23 chr17 1749625 1749928 -87754625 - AluSg SINE Alu -13 297 1 307 350 105 35 chr17 1749935 1750135 -87754418 + L2 LINE L2 3099 3312 -1 2201 56 3 30 chr17 1750758 1751063 -87753490 - AluY SINE Alu -14 297 1 181 288 136 15 chr17 1751066 1751132 -87753421 - MER5A DNA MER1_type -115 74 1 2242 96 3 3 chr17 1752591 1752894 -87751659 - AluSp SINE Alu -10 303 1 2240 78 3 13 chr17 1753781 1754087 -87750466 - AluSp SINE Alu -10 303 1 258 258 176 0 chr17 1754987 1755128 -87749425 - MIR SINE MIR -75 187 13 212 214 5 88 chr17 1755467 1755659 -87748894 + CT-rich Low_complexity Low_complexity 3 178 0 230 263 0 59 chr17 1755737 1755889 -87748664 + CT-rich Low_complexity Low_complexity 4 146 0 227 226 11 74 chr17 1755967 1756157 -87748396 + CT-rich Low_complexity Low_complexity 3 180 0 224 195 0 103 chr17 1756322 1756517 -87748036 + CT-rich Low_complexity Low_complexity 3 177 0 985 81 0 29 chr17 1756673 1756809 -87747744 + FLAM_C SINE Alu 1 132 -1 694 289 56 5 chr17 1758287 1758484 -87746069 - MIR SINE MIR -28 234 28 2240 84 0 7 chr17 1760020 1760316 -87744237 - AluY SINE Alu -17 294 1 604 104 208 19 chr17 1760318 1760424 -87744129 - AluSg SINE Alu -179 131 6 2282 98 0 0 chr17 1760666 1760972 -87743581 - AluSg SINE Alu -4 306 1 330 309 81 7 chr17 1760996 1761132 -87743421 - MIR SINE MIR -110 152 7 328 217 29 0 chr17 1762049 1762118 -87742435 + MIR SINE MIR 76 146 -62 324 346 22 15 chr17 1762118 1762254 -87742299 - L2 LINE L2 0 3313 3177 2208 100 0 16 chr17 1763227 1763537 -87741016 - AluSx SINE Alu -6 306 2 1840 109 0 84 chr17 1763549 1763870 -87740683 - AluSg SINE Alu -16 294 1 900 91 0 8 chr17 1763880 1764001 -87740552 - FLAM_C SINE Alu -21 122 3 389 235 198 43 chr17 1764005 1764167 -87740386 - MIR3 SINE MIR -10 198 12 276 344 81 63 chr17 1765423 1765490 -87739063 + L2 LINE L2 2835 2899 -414 1985 108 0 91 chr17 1765490 1765831 -87738722 - AluSg SINE Alu 0 310 1 276 344 81 63 chr17 1765831 1766015 -87738538 + L2 LINE L2 2899 3078 -235 2321 86 0 3 chr17 1766015 1766316 -87738237 - AluSx SINE Alu -12 300 1 276 344 81 63 chr17 1766316 1766508 -87738045 + L2 LINE L2 3078 3287 -26 2393 66 3 0 chr17 1766537 1766842 -87737711 - AluY SINE Alu -5 306 1 186 43 0 0 chr17 1767077 1767100 -87737453 + (TCC)n Simple_repeat Simple_repeat 2 24 0 248 238 24 24 chr17 1770681 1770765 -87733788 + G-rich Low_complexity Low_complexity 3 86 0 328 282 48 19 chr17 1771532 1771635 -87732918 - L1MC4 LINE L1 -478 7564 7459 1732 107 0 8 chr17 1771635 1771878 -87732675 + AluSx SINE Alu 1 241 -71 226 280 16 80 chr17 1771935 1772060 -87732493 - MIR SINE MIR -40 222 106 2268 86 7 0 chr17 1772165 1772561 -87731992 + AluY SINE Alu 1 311 0 2274 99 0 10 chr17 1772960 1773273 -87731280 + AluSg SINE Alu 1 310 0 2192 97 7 7 chr17 1773309 1773619 -87730934 + AluSx SINE Alu 1 310 -2 227 302 52 10 chr17 1773724 1773820 -87730733 - MIR SINE MIR -4 258 159 2403 61 3 0 chr17 1773821 1774114 -87730439 - AluSp SINE Alu -19 294 1 1791 161 3 10 chr17 1774117 1774415 -87730138 - AluJb SINE Alu -13 299 4 900 156 12 24 chr17 1774420 1774587 -87729966 - AluJo/FRAM SINE Alu -1 301 137 1312 115 0 11 chr17 1774590 1774781 -87729772 - AluSp SINE Alu -19 294 106 2071 84 40 17 chr17 1775180 1775477 -87729076 - AluSx SINE Alu -8 304 1 255 333 20 10 chr17 1775490 1775589 -87728964 - MER5A DNA MER1_type -83 106 7 1547 154 110 4 chr17 1775986 1776259 -87728294 - AluSx SINE Alu -10 302 1 866 121 15 23 chr17 1776269 1776401 -87728152 - FLAM_C SINE Alu -2 131 1 2219 63 0 22 chr17 1776404 1776720 -87727833 - AluY SINE Alu 0 311 3 21 36 0 0 chr17 1776724 1776752 -87727801 + AT_rich Low_complexity Low_complexity 1 28 0 204 275 87 72 chr17 1776833 1776877 -87727676 - MIR SINE MIR -177 85 38 942 216 22 57 chr17 1776877 1777104 -87727449 + MER20 DNA MER1_type 1 219 0 204 275 87 72 chr17 1777104 1777128 -87727425 - MIR SINE MIR -224 38 16 2425 77 0 13 chr17 1777579 1777892 -87726661 + AluSx SINE Alu 1 309 -3 23 92 0 0 chr17 1780140 1780205 -87724348 + GC_rich Low_complexity Low_complexity 1 65 0 224 269 44 19 chr17 1781501 1781661 -87722892 + A-rich Low_complexity Low_complexity 4 167 0 555 176 29 0 chr17 1781708 1781810 -87722743 + AluSg/x SINE Alu 187 291 -18 1332 183 32 32 chr17 1782184 1782310 -87722243 + AluJo SINE Alu 1 126 -186 2198 70 10 30 chr17 1782310 1782609 -87721944 - AluSq SINE Alu -20 293 1 1332 183 32 32 chr17 1782609 1782766 -87721787 + AluJo SINE Alu 125 284 -28 38 0 0 0 chr17 1782766 1782804 -87721749 + AT_rich Low_complexity Low_complexity 1 38 0 516 153 82 0 chr17 1783904 1784002 -87720551 + FLAM_A SINE Alu 22 127 -15 4579 141 44 31 chr17 1784002 1784634 -87719919 - Tigger1 DNA MER2_type -194 2224 1576 1483 147 124 15 chr17 1784634 1784899 -87719654 - AluJb SINE Alu -18 294 1 4579 141 44 31 chr17 1784899 1785155 -87719398 - Tigger1 DNA MER2_type -842 1576 1325 338 95 16 79 chr17 1785155 1785218 -87719335 - Tigger1 DNA MER2_type -1035 1383 1325 3573 127 11 21 chr17 1785257 1785873 -87718680 - Tigger1 DNA MER2_type -1012 1406 797 577 91 0 0 chr17 1785877 1785954 -87718599 - AluJo SINE Alu -10 302 226 1050 157 56 6 chr17 1785954 1786132 -87718421 - AluJo SINE Alu -125 187 1 1136 101 22 6 chr17 1786132 1786310 -87718243 - Tigger1 DNA MER2_type -1614 804 624 1556 165 38 70 chr17 1786310 1786451 -87718102 - Tigger1 DNA MER2_type -2060 358 214 2330 87 0 13 chr17 1786451 1786750 -87717803 + AluSc SINE Alu 1 295 -14 1556 165 38 70 chr17 1786750 1786779 -87717774 - Tigger1 DNA MER2_type -2204 214 186 1983 125 0 27 chr17 1786779 1787075 -87717478 + AluSx SINE Alu 1 288 -24 1556 165 38 70 chr17 1787075 1787273 -87717280 - Tigger1 DNA MER2_type -2232 186 1 411 200 0 67 chr17 1787273 1787362 -87717191 + MER58B DNA MER1_type 259 341 0 1652 203 0 20 chr17 1788519 1788825 -87715728 - AluJb SINE Alu -12 300 1 195 42 0 0 chr17 1788832 1788856 -87715697 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2490 82 0 3 chr17 1788903 1789208 -87715345 + AluSq SINE Alu 1 304 -9 250 232 0 18 chr17 1789217 1789273 -87715280 + L1MB7 LINE L1 5559 5613 -508 1913 158 21 0 chr17 1789275 1789566 -87714987 + AluJb SINE Alu 1 297 -15 2263 93 0 13 chr17 1789568 1789869 -87714684 + AluY SINE Alu 1 297 -14 2051 94 0 11 chr17 1790649 1790924 -87713629 - AluSx SINE Alu -40 272 1 2170 99 7 3 chr17 1791216 1791500 -87713053 - AluSq SINE Alu -17 296 12 1561 202 0 38 chr17 1793074 1793391 -87711162 - AluJo SINE Alu -7 305 1 1934 146 14 7 chr17 1793397 1793691 -87710862 - AluSx SINE Alu -16 296 1 612 187 15 8 chr17 1793726 1793860 -87710693 - L1MB3 LINE L1 -1 6182 6048 354 264 0 0 chr17 1793860 1793947 -87710606 + L1MB7 LINE L1 5938 6024 -160 311 213 85 53 chr17 1793954 1794048 -87710505 - L1MB3 LINE L1 -147 6036 5940 275 143 111 0 chr17 1794459 1794522 -87710031 - MIR SINE MIR -102 160 91 217 132 0 0 chr17 1794555 1794593 -87709960 + (T)n Simple_repeat Simple_repeat 1 38 0 518 140 190 10 chr17 1794706 1794806 -87709747 + FLAM_A SINE Alu 1 118 -15 2200 75 14 11 chr17 1794891 1795213 -87709340 - AluSx SINE Alu 0 323 1 542 257 56 76 chr17 1795224 1795473 -87709080 - MIR SINE MIR -4 258 15 333 303 49 16 chr17 1795955 1796077 -87708476 + MIR3 SINE MIR 76 201 -7 2329 68 11 4 chr17 1799427 1799733 -87704820 - AluSg SINE Alu 0 308 1 2060 124 3 7 chr17 1799781 1800071 -87704482 + AluJo SINE Alu 1 289 -23 2251 119 0 3 chr17 1800085 1800387 -87704166 + AluSx SINE Alu 5 305 -7 2116 78 0 119 chr17 1800436 1800780 -87703773 - AluSc SINE Alu -6 303 1 1881 140 14 7 chr17 1800919 1801211 -87703342 + AluSx SINE Alu 1 294 -18 959 98 98 20 chr17 1801827 1801980 -87702573 - AluSg/x SINE Alu -19 291 127 2196 92 7 3 chr17 1801989 1802294 -87702259 - AluY SINE Alu 0 306 1 2257 87 37 7 chr17 1802306 1802604 -87701949 - AluSp SINE Alu -6 307 1 2359 94 0 19 chr17 1802981 1803299 -87701254 - AluSx SINE Alu 0 312 1 2550 43 7 10 chr17 1805557 1805862 -87698691 + AluSp SINE Alu 1 304 -9 2340 88 7 19 chr17 1810004 1810312 -87694241 - AluSq SINE Alu -6 307 4 2413 103 3 0 chr17 1810364 1810674 -87693879 + AluSx SINE Alu 1 311 -1 192 356 33 22 chr17 1811413 1811503 -87693050 + MIR SINE MIR 124 214 -48 283 356 7 34 chr17 1811735 1811881 -87692672 + L3 LINE CR1 1296 1437 -140 2325 89 0 13 chr17 1812228 1812541 -87692012 + AluSx SINE Alu 1 309 -3 604 231 62 59 chr17 1812666 1812967 -87691586 + MLT1C LTR MaLR 5 316 -151 1012 172 22 43 chr17 1812967 1813199 -87691354 + AluJb SINE Alu 86 312 0 744 176 13 13 chr17 1813199 1813352 -87691201 + MLT1C LTR MaLR 306 458 -9 399 21 0 0 chr17 1813646 1813694 -87690859 + (CA)n Simple_repeat Simple_repeat 1 48 0 2473 54 0 16 chr17 1813759 1814073 -87690480 + AluY SINE Alu 1 309 -2 2078 114 3 23 chr17 1814872 1815179 -87689374 - AluSg SINE Alu -9 301 1 202 278 0 28 chr17 1817767 1817839 -87686714 + CT-rich Low_complexity Low_complexity 2 71 0 1878 141 7 23 chr17 1819306 1819611 -87684942 + AluSx SINE Alu 1 300 -12 2294 96 0 13 chr17 1819967 1820270 -87684283 - AluSx SINE Alu -13 299 1 693 163 0 0 chr17 1820868 1820991 -87683562 + FLAM_A SINE Alu 4 126 -7 22 0 0 0 chr17 1820991 1821013 -87683540 + AT_rich Low_complexity Low_complexity 1 22 0 2166 92 0 11 chr17 1821026 1821310 -87683243 + AluSx SINE Alu 1 281 -31 2302 79 7 0 chr17 1821316 1821623 -87682930 + AluY SINE Alu 1 309 0 279 323 76 76 chr17 1871849 1872150 -87632403 - L2 LINE L2 -64 3208 2905 2314 102 0 0 chr17 1872150 1872453 -87632100 + AluSx SINE Alu 1 303 -9 279 323 76 76 chr17 1872453 1872547 -87632006 - L2 LINE L2 -366 2906 2813 2343 97 0 0 chr17 1873699 1874009 -87630544 + AluSx SINE Alu 1 310 -2 335 254 120 14 chr17 1874014 1874156 -87630397 - MIR3 SINE MIR -41 167 11 264 59 0 0 chr17 1875279 1875313 -87629240 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 343 36 36 chr17 1876199 1876447 -87628106 + MIR SINE MIR 1 248 -14 2304 79 3 3 chr17 1879148 1879451 -87625102 - AluSx SINE Alu -9 303 1 1667 160 26 36 chr17 1879451 1879628 -87624925 - AluJb SINE Alu -9 303 129 2106 127 0 3 chr17 1879628 1879919 -87624634 + AluSx SINE Alu 1 290 -22 1667 160 26 36 chr17 1879919 1880047 -87624506 - AluJb SINE Alu -183 129 1 213 217 0 28 chr17 1881260 1881326 -87623227 + C-rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr17 1881990 1882020 -87622533 + GC_rich Low_complexity Low_complexity 1 30 0 231 236 0 0 chr17 1882917 1882989 -87621564 + CT-rich Low_complexity Low_complexity 3 74 0 437 330 157 22 chr17 1883810 1884077 -87620476 - L2 LINE L2 -6 3307 3005 2449 56 0 0 chr17 1884130 1884432 -87620121 + AluSg SINE Alu 1 302 -8 2166 99 26 0 chr17 1884438 1884740 -87619813 + AluSx SINE Alu 1 310 -2 239 298 96 0 chr17 1884939 1885033 -87619520 - L2 LINE L2 -217 3055 2953 757 140 0 66 chr17 1885098 1885234 -87619319 + FLAM_C SINE Alu 14 140 -3 264 274 36 24 chr17 1885422 1885506 -87619047 - MIR SINE MIR -76 132 48 1728 144 26 49 chr17 1886898 1887203 -87617350 + AluJo SINE Alu 1 298 -14 251 254 17 0 chr17 1888164 1888223 -87616330 - L2 LINE L2 -5 3267 3208 216 288 0 0 chr17 1888575 1888634 -87615919 + L2 LINE L2 3255 3313 0 1382 186 16 52 chr17 1888708 1888848 -87615705 + AluJo SINE Alu 1 144 -168 2374 74 0 16 chr17 1888848 1889157 -87615396 + AluSx SINE Alu 1 304 -8 1382 186 16 52 chr17 1889157 1889323 -87615230 + AluJo SINE Alu 144 296 -16 188 263 50 50 chr17 1889408 1889507 -87615046 + L2 LINE L2 3093 3191 -81 592 205 37 74 chr17 1890136 1890302 -87614251 - LTR39 LTR ERV1 0 783 623 2149 77 40 3 chr17 1890302 1890600 -87613953 - AluY SINE Alu -2 309 1 592 205 37 74 chr17 1890600 1890623 -87613930 - LTR39 LTR ERV1 -160 623 601 1088 174 59 41 chr17 1890751 1891021 -87613532 - LTR39 LTR ERV1 -508 275 1 273 57 0 135 chr17 1892014 1892155 -87612398 + (CCCCCT)n Simple_repeat Simple_repeat 2 123 0 536 110 0 94 chr17 1892169 1892360 -87612193 + (CCCCCT)n Simple_repeat Simple_repeat 2 174 0 216 217 0 33 chr17 1892372 1892432 -87612121 + C-rich Low_complexity Low_complexity 3 60 0 218 281 0 0 chr17 1894752 1894809 -87609744 - MIR SINE MIR -111 97 41 541 327 28 28 chr17 1895494 1895711 -87608842 + MIR SINE MIR 43 259 -3 1571 168 23 52 chr17 1895711 1896020 -87608533 + AluJb SINE Alu 1 300 -12 1687 181 87 0 chr17 1896118 1896428 -87608125 + MER1B DNA MER1_type 1 337 0 467 243 44 29 chr17 1896613 1896749 -87607804 - MIR3 SINE MIR -32 176 39 2287 85 0 0 chr17 1896749 1897043 -87607510 - AluY SINE Alu -16 295 2 2606 43 0 0 chr17 1897055 1897360 -87607193 - AluY SINE Alu -6 305 1 183 309 149 75 chr17 1898521 1898709 -87605844 - L2 LINE L2 -29 3284 3083 335 308 157 0 chr17 1898954 1899113 -87605440 + MIR SINE MIR 17 200 -62 25 0 0 0 chr17 1899277 1899302 -87605251 + GC_rich Low_complexity Low_complexity 1 25 0 1730 160 17 10 chr17 1901701 1901995 -87602558 - AluJb SINE Alu -11 301 6 1624 174 26 16 chr17 1902012 1902316 -87602237 - AluJb SINE Alu -5 307 1 326 245 47 9 chr17 1902850 1902956 -87601597 + Charlie8 DNA MER1_type 91 200 -2217 2156 110 10 0 chr17 1903347 1903647 -87600906 + AluSp SINE Alu 1 303 -10 1208 97 0 0 chr17 1903648 1903802 -87600751 + AluSg/x SINE Alu 135 288 -24 312 275 101 9 chr17 1903811 1903920 -87600633 + MER5A DNA MER1_type 71 189 0 2107 134 0 0 chr17 1904095 1904400 -87600153 - AluSx SINE Alu -7 305 1 2038 143 0 3 chr17 1904475 1904782 -87599771 + AluJo SINE Alu 1 306 -6 1228 140 0 0 chr17 1904783 1904961 -87599592 + AluSg/x SINE Alu 124 301 -9 207 130 74 0 chr17 1904962 1905016 -87599537 + (TA)n Simple_repeat Simple_repeat 1 58 0 1232 162 5 5 chr17 1905070 1905286 -87599267 - AluSg/x SINE Alu -12 300 85 1213 161 71 36 chr17 1905287 1905567 -87598986 - AluJo SINE Alu -22 290 1 1691 149 0 70 chr17 1905578 1905894 -87598659 - AluJb SINE Alu -18 294 1 21 0 0 0 chr17 1906300 1906321 -87598232 + GC_rich Low_complexity Low_complexity 1 21 0 251 294 69 10 chr17 1908532 1908634 -87595919 + MIR SINE MIR 112 219 -43 26 64 0 0 chr17 1908768 1908815 -87595738 + AT_rich Low_complexity Low_complexity 1 47 0 479 111 49 0 chr17 1908848 1908929 -87595624 - AluY SINE Alu -27 284 200 23 0 0 0 chr17 1909153 1909176 -87595377 + GC_rich Low_complexity Low_complexity 1 23 0 31 76 0 0 chr17 1910505 1910571 -87593982 + GC_rich Low_complexity Low_complexity 1 66 0 28 48 0 0 chr17 1911355 1911397 -87593156 + GC_rich Low_complexity Low_complexity 1 42 0 200 292 0 31 chr17 1912117 1912213 -87592340 + C-rich Low_complexity Low_complexity 3 95 0 27 62 0 0 chr17 1912531 1912579 -87591974 + GC_rich Low_complexity Low_complexity 1 48 0 1873 181 0 3 chr17 1915299 1915603 -87588950 + AluJb SINE Alu 6 308 -4 23 0 0 0 chr17 1915746 1915769 -87588784 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr17 1915786 1915832 -87588721 + (TAGG)n Simple_repeat Simple_repeat 4 48 0 2123 100 13 3 chr17 1915852 1916151 -87588402 - AluSq SINE Alu -11 302 1 517 143 22 22 chr17 1916151 1916242 -87588311 - AluSg/x SINE Alu -7 302 212 454 346 64 40 chr17 1916705 1916976 -87587577 + L1MC4a LINE L1 5656 5838 -283 2576 39 3 3 chr17 1916977 1917287 -87587266 + AluYb8 SINE Alu 1 310 -8 429 218 58 11 chr17 1917301 1917475 -87587078 + L1MB7 LINE L1 4378 4559 -1587 315 254 10 62 chr17 1917533 1917685 -87586868 + L1MB7 LINE L1 4976 5093 -1053 1801 78 12 4 chr17 1917767 1918012 -87586541 + AluSg SINE Alu 44 290 -20 537 161 102 8 chr17 1918232 1918350 -87586203 - MER5A DNA MER1_type -33 156 28 283 182 0 0 chr17 1918377 1918390 -87586163 + MER3 DNA MER1_type 36 48 -161 674 210 114 0 chr17 1918390 1918557 -87585996 - MER3 DNA MER1_type -1 208 23 266 272 201 65 chr17 1918620 1918793 -87585760 + L3 LINE CR1 1188 1336 -241 1718 169 10 14 chr17 1918793 1919088 -87585465 - AluJo SINE Alu -18 294 1 266 272 201 65 chr17 1919088 1919252 -87585301 + L3 LINE CR1 1336 1571 -6 574 189 66 41 chr17 1919376 1919498 -87585055 - FLAM_A SINE Alu -6 136 12 588 166 134 16 chr17 1919521 1919708 -87584845 + L1MB7 LINE L1 5083 5291 -855 859 104 17 0 chr17 1919708 1919823 -87584730 + FLAM_C SINE Alu 1 117 -16 201 39 0 0 chr17 1919866 1919892 -87584661 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3889 150 36 31 chr17 1919892 1919947 -87584606 + L1MB7 LINE L1 5275 5328 -856 2444 64 0 13 chr17 1919947 1920258 -87584295 + AluSp SINE Alu 1 307 -6 3889 150 36 31 chr17 1920258 1921107 -87583446 + L1MB7 LINE L1 5328 6184 0 387 163 12 25 chr17 1921200 1921280 -87583273 - L1MA10 LINE L1 0 6334 6256 1193 202 4 16 chr17 1921288 1921395 -87583158 - AluJb SINE Alu -67 245 138 2248 92 0 25 chr17 1921395 1921712 -87582841 - AluSq SINE Alu -4 309 1 1193 202 4 16 chr17 1921712 1921852 -87582701 - AluJb SINE Alu -174 138 1 628 301 8 25 chr17 1921922 1922158 -87582395 - L1MEd LINE L1 -5424 695 464 396 313 57 83 chr17 1922179 1922447 -87582106 - L1MEd LINE L1 -5776 343 85 1510 147 41 57 chr17 1922447 1922761 -87581792 - AluSx SINE Alu -3 309 1 396 313 57 83 chr17 1922761 1922843 -87581710 - L1MEd LINE L1 -6034 85 2 253 108 0 0 chr17 1922882 1922919 -87581634 + Alu SINE Alu 5 41 -261 577 118 11 0 chr17 1922919 1923012 -87581541 + AluSg/x SINE Alu 215 308 -4 1613 155 13 79 chr17 1923894 1924211 -87580342 - AluSx SINE Alu -16 296 1 335 226 9 70 chr17 1924239 1924354 -87580199 - MIR SINE MIR -50 212 105 2180 93 0 0 chr17 1924466 1924745 -87579808 + AluSx SINE Alu 11 289 -23 743 203 0 0 chr17 1924804 1924927 -87579626 + FLAM_A SINE Alu 4 126 -7 3687 141 32 71 chr17 1925021 1925256 -87579297 + L1MB3 LINE L1 5374 5617 -566 1840 131 11 3 chr17 1925256 1925565 -87578988 + AluJb SINE Alu 1 311 0 3687 141 32 71 chr17 1925565 1925922 -87578631 + L1MB3 LINE L1 5617 5986 -197 1942 159 0 0 chr17 1925922 1926218 -87578335 + AluSx SINE Alu 1 296 -16 3687 141 32 71 chr17 1926218 1926413 -87578140 + L1MB3 LINE L1 5986 6131 -52 2302 101 0 0 chr17 1926413 1926720 -87577833 + AluSx SINE Alu 1 307 -5 3687 141 32 71 chr17 1926720 1926772 -87577781 + L1MB3 LINE L1 6131 6183 0 1950 155 9 40 chr17 1927368 1927716 -87576837 + MER1B DNA MER1_type 1 337 0 3382 203 66 21 chr17 1929740 1930428 -87574125 + L1ME1 LINE L1 5191 5932 -234 1048 90 229 5 chr17 1930428 1930616 -87573937 - MER30 DNA MER1_type 0 230 1 3382 203 66 21 chr17 1930616 1930842 -87573711 + L1ME1 LINE L1 5932 6146 -20 1567 172 46 4 chr17 1932112 1932373 -87572180 + AluJb SINE Alu 23 294 -18 2162 107 0 30 chr17 1932393 1932692 -87571861 - AluSx SINE Alu -15 297 8 25 0 0 0 chr17 1933376 1933401 -87571152 + AT_rich Low_complexity Low_complexity 1 25 0 2273 108 3 13 chr17 1933445 1933760 -87570793 + AluSq SINE Alu 1 312 -1 1955 156 7 3 chr17 1933981 1934282 -87570271 - AluJb SINE Alu -1 311 10 1283 164 5 0 chr17 1935973 1936174 -87568379 + AluJo SINE Alu 1 202 -110 2926 208 45 46 chr17 1936203 1936476 -87568077 + L1ME2 LINE L1 5152 5424 -740 2101 120 7 29 chr17 1936476 1936784 -87567769 + AluSx SINE Alu 1 301 -11 2926 208 45 46 chr17 1936784 1937514 -87567039 + L1ME2 LINE L1 5424 6148 -16 672 159 24 0 chr17 1937699 1937825 -87566728 + AluJb SINE Alu 2 130 -182 713 276 150 46 chr17 1937837 1937989 -87566564 - L1ME4a LINE L1 -6 6115 5980 234 0 0 0 chr17 1937989 1938015 -87566538 + (CA)n Simple_repeat Simple_repeat 2 27 0 713 276 150 46 chr17 1938015 1938069 -87566484 - L1ME4a LINE L1 -141 5980 5933 1832 190 3 0 chr17 1938069 1938379 -87566174 - AluJb SINE Alu -1 311 1 713 276 150 46 chr17 1938379 1938610 -87565943 - L1ME4a LINE L1 -188 5933 5631 1651 244 113 43 chr17 1939185 1939886 -87564667 + L2 LINE L2 2305 3067 -246 188 319 0 0 chr17 1939939 1939986 -87564567 - L2 LINE L2 -16 3256 3210 635 164 9 9 chr17 1940046 1940162 -87564391 - AluJ SINE Alu -16 296 181 633 91 20 20 chr17 1940165 1940264 -87564289 - AluSq SINE Alu -93 220 122 860 91 80 148 chr17 1940264 1940326 -87564227 - AluJ SINE Alu -137 175 110 2258 89 4 0 chr17 1940326 1940640 -87563913 + AluSg SINE Alu 1 315 0 860 91 80 148 chr17 1940640 1940752 -87563801 - AluJ SINE Alu -202 110 12 182 272 35 70 chr17 1940753 1940867 -87563686 - MIR SINE MIR -60 148 39 2090 114 37 23 chr17 1940895 1941194 -87563359 + AluSx SINE Alu 7 309 -3 1509 208 27 3 chr17 1941204 1941502 -87563051 + AluJo SINE Alu 1 305 -7 331 329 118 54 chr17 1941882 1942195 -87562358 - L1MEd LINE L1 -4922 1197 865 2176 105 3 25 chr17 1942214 1942528 -87562025 - AluSx SINE Alu -5 307 1 1641 215 0 3 chr17 1942612 1942905 -87561648 + AluJb SINE Alu 1 292 -20 2032 134 3 7 chr17 1943133 1943440 -87561113 - AluSx SINE Alu -6 306 1 1749 146 0 11 chr17 1943441 1943716 -87560837 - AluJo SINE Alu -6 306 35 586 138 107 16 chr17 1943767 1943926 -87560627 + MER46A DNA MER2_type 5 227 -9 474 218 9 36 chr17 1944304 1944414 -87560139 + MLT1D LTR MaLR 1 107 -398 2303 114 0 0 chr17 1944416 1944715 -87559838 - AluSx SINE Alu -13 299 1 1234 112 0 51 chr17 1944722 1944918 -87559635 - AluSg/x SINE Alu 0 312 127 2227 105 3 20 chr17 1944935 1945231 -87559322 - AluSq SINE Alu -18 295 5 1691 146 4 0 chr17 1945299 1945546 -87559007 - AluSx SINE Alu -21 291 44 612 271 38 55 chr17 1945594 1945886 -87558667 + L1M4 LINE L1 4076 4362 -1784 1814 165 28 3 chr17 1945891 1946182 -87558371 + AluJb SINE Alu 2 299 -13 1864 184 0 0 chr17 1946238 1946537 -87558016 + AluJo SINE Alu 1 299 -13 661 224 0 8 chr17 1946687 1946821 -87557732 - FLAM_A SINE Alu 0 133 1 2228 89 6 25 chr17 1946826 1947141 -87557412 - AluY SINE Alu -2 309 1 384 243 28 19 chr17 1947145 1947252 -87557301 - MIR SINE MIR -61 147 40 985 252 20 20 chr17 1949077 1949327 -87555226 - MIR SINE MIR -1 261 12 297 89 0 0 chr17 1951336 1951381 -87553172 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 100 0 0 chr17 1951465 1951495 -87553058 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2138 130 10 0 chr17 1956108 1956415 -87548138 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1957871 1958186 -87546367 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1958188 1958447 -87546106 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1958959 1959116 -87545437 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1959118 1959423 -87545130 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1959423 1959642 -87544911 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1959646 1959706 -87544847 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1959907 1959976 -87544577 - AluJ SINE Alu -39 263 197 737 154 46 23 chr17 1959981 1960111 -87544442 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1960455 1960743 -87543810 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1960750 1960888 -87543665 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1961667 1961761 -87542792 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1962265 1962417 -87542136 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1962417 1962713 -87541840 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1962713 1962850 -87541703 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1962901 1962961 -87541592 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1962961 1962989 -87541564 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1963189 1963293 -87541260 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1963349 1963640 -87540913 - AluJb SINE Alu -3 309 1 509 258 151 82 chr17 1963718 1964184 -87540369 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1964184 1964490 -87540063 - AluJb SINE Alu -12 300 1 509 258 151 82 chr17 1964490 1964561 -87539992 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1964676 1964829 -87539724 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1964834 1965135 -87539418 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1966016 1966075 -87538478 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1966075 1966234 -87538319 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1966234 1966541 -87538012 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1966541 1966678 -87537875 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1966787 1967051 -87537502 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1967055 1967155 -87537398 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1967313 1967606 -87536947 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1967871 1968058 -87536495 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1968395 1968565 -87535988 - L1MA7 LINE L1 0 6291 6122 1790 155 3 48 chr17 1968565 1968874 -87535679 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1968874 1969371 -87535182 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1970155 1970454 -87534099 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1970454 1970599 -87533954 - AluSq/x SINE Alu -168 145 1 238 294 327 20 chr17 1970910 1971063 -87533490 - MIR SINE MIR -62 200 1 826 178 20 13 chr17 1971129 1971281 -87533272 - AluJb SINE Alu -19 293 141 181 376 47 0 chr17 1971923 1972008 -87532545 + L3 LINE CR1 1485 1573 -4 666 197 0 0 chr17 1979128 1979275 -87525278 + (TG)n Simple_repeat Simple_repeat 1 147 0 369 0 0 0 chr17 1979535 1979576 -87524977 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 250 0 0 chr17 1980543 1980587 -87523966 + G-rich Low_complexity Low_complexity 3 46 0 195 42 0 0 chr17 1982252 1982276 -87522277 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1435 143 0 5 chr17 1982281 1982504 -87522049 + AluJb SINE Alu 89 310 -2 256 244 25 50 chr17 1982690 1982809 -87521744 + MER113 DNA MER1_type? 5 120 -401 221 222 19 0 chr17 1985767 1985821 -87518732 + MIR SINE MIR 196 250 -12 2264 100 0 0 chr17 1985948 1986263 -87518290 - AluSx SINE Alu 0 316 2 216 0 0 0 chr17 1986267 1986291 -87518262 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2501 80 0 0 chr17 1986309 1986610 -87517943 + AluSg SINE Alu 1 301 -9 365 61 0 0 chr17 1986628 1986677 -87517876 + AluSq/x SINE Alu 87 135 -168 2076 129 0 14 chr17 1986677 1986971 -87517582 + AluSq SINE Alu 1 290 -23 1052 143 0 0 chr17 1986975 1987122 -87517431 - FRAM SINE Alu -30 146 1 243 321 21 57 chr17 1990255 1990448 -87514105 - L2 LINE L2 -213 3059 2874 771 181 94 7 chr17 1990562 1990711 -87513842 - FAM SINE Alu -13 162 1 354 211 26 0 chr17 1990711 1990787 -87513766 - MIR SINE MIR -112 150 73 194 357 29 14 chr17 1990794 1990934 -87513619 - L2 LINE L2 -452 2862 2721 232 315 110 0 chr17 1990996 1991069 -87513484 + MER91C DNA MER1_type 30 110 -30 2151 121 28 0 chr17 1991261 1991551 -87513002 - AluSq SINE Alu -15 298 1 2330 102 0 0 chr17 1991850 1992143 -87512410 - AluSx SINE Alu -19 293 1 1722 101 93 12 chr17 1992265 1992512 -87512041 + AluSc SINE Alu 34 300 -9 2341 89 0 0 chr17 1992672 1993003 -87511550 + AluSx SINE Alu 1 331 0 2104 141 3 0 chr17 1993022 1993327 -87511226 + AluSx SINE Alu 7 312 0 729 252 19 27 chr17 1993401 1993506 -87511047 - MIR SINE MIR -12 250 146 2474 88 0 3 chr17 1993506 1993814 -87510739 - AluSg SINE Alu -3 307 1 729 252 19 27 chr17 1993814 1993925 -87510628 - MIR SINE MIR -116 146 40 985 252 20 20 chr17 1995749 1995999 -87508554 - MIR SINE MIR -1 261 12 315 85 0 0 chr17 1998008 1998055 -87506498 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 100 0 0 chr17 1998139 1998169 -87506384 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2211 133 3 0 chr17 2002781 2003090 -87501463 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 2004546 2004861 -87499692 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 2004863 2005122 -87499431 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 2005634 2005791 -87498762 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 2005793 2006098 -87498455 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 2006098 2006317 -87498236 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 2006321 2006381 -87498172 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 2006582 2006651 -87497902 - AluJ SINE Alu -39 263 197 743 155 47 16 chr17 2006656 2006785 -87497768 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 2007129 2007417 -87497136 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 2007424 2007562 -87496991 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 2008341 2008435 -87496118 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 2008939 2009091 -87495462 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 2009091 2009387 -87495166 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 2009387 2009524 -87495029 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 2009575 2009635 -87494918 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 2009635 2009663 -87494890 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 2009863 2009967 -87494586 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 2010023 2010314 -87494239 - AluJb SINE Alu -3 309 1 513 255 151 82 chr17 2010392 2010858 -87493695 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 2010858 2011164 -87493389 - AluJb SINE Alu -12 300 1 513 255 151 82 chr17 2011164 2011235 -87493318 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 2011350 2011503 -87493050 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 2011508 2011809 -87492744 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 2012690 2012749 -87491804 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 2012749 2012908 -87491645 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 2012908 2013215 -87491338 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 2013215 2013352 -87491201 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 2013461 2013725 -87490828 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 2013729 2013829 -87490724 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 2013987 2014280 -87490273 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 2014546 2014733 -87489820 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 2015070 2015240 -87489313 - L1MA7 LINE L1 0 6291 6122 1759 158 3 52 chr17 2015240 2015550 -87489003 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 2015550 2016047 -87488506 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 2016831 2017130 -87487423 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 2017130 2017275 -87487278 - AluSq/x SINE Alu -167 145 1 238 294 327 20 chr17 2017585 2017738 -87486815 - MIR SINE MIR -62 200 1 1947 146 3 33 chr17 2017804 2018106 -87486447 - AluJb SINE Alu -19 293 1 2315 85 11 0 chr17 2018143 2018451 -87486102 + AluSq SINE Alu 1 311 0 1703 128 3 104 chr17 2019705 2020033 -87484520 - AluYa5 SINE Alu -14 297 3 192 40 0 0 chr17 2020943 2020968 -87483585 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2027 135 0 44 chr17 2021215 2021533 -87483020 + AluSx SINE Alu 2 305 -7 1773 152 0 14 chr17 2021538 2021815 -87482738 + AluSx SINE Alu 1 273 -39 336 226 39 10 chr17 2021819 2021921 -87482632 - MIR SINE MIR -48 214 110 2182 126 0 0 chr17 2022150 2022443 -87482110 - AluSx SINE Alu -19 293 1 2101 133 33 0 chr17 2022689 2022990 -87481563 + AluSx SINE Alu 1 311 -1 696 255 115 36 chr17 2023977 2024255 -87480298 - L2 LINE L2 -8 3305 3006 1937 123 37 0 chr17 2024314 2024583 -87479970 - AluJo SINE Alu -33 279 1 2455 55 0 14 chr17 2025102 2025447 -87479106 + AluY SINE Alu 1 341 0 2198 139 0 0 chr17 2025631 2025933 -87478620 - AluJb SINE Alu -10 302 1 1554 157 16 72 chr17 2025933 2026251 -87478302 - AluJb SINE Alu -12 300 1 2344 93 0 7 chr17 2026861 2027161 -87477392 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr17 2027262 2027287 -87477266 + AT_rich Low_complexity Low_complexity 1 25 0 2053 96 8 0 chr17 2027522 2027782 -87476771 + AluSq SINE Alu 1 262 -51 917 26 17 0 chr17 2027782 2027897 -87476656 + (TAAAA)n Simple_repeat Simple_repeat 2 118 0 355 290 22 0 chr17 2028364 2028502 -87476051 + L1ME LINE L1 4771 4911 -1235 1384 192 73 8 chr17 2028636 2028897 -87475656 - AluJo SINE Alu -34 278 1 709 199 18 60 chr17 2028899 2028954 -87475599 + L1ME LINE L1 5087 5143 -1021 1670 181 3 29 chr17 2028954 2029269 -87475284 - AluJo SINE Alu -5 307 1 709 199 18 60 chr17 2029269 2029332 -87475221 + L1ME LINE L1 5143 5207 -957 2198 85 0 75 chr17 2029332 2029651 -87474902 + AluSx SINE Alu 1 295 -17 709 199 18 60 chr17 2029651 2029907 -87474646 + L1ME LINE L1 5207 5442 -722 1023 128 0 0 chr17 2029987 2030128 -87474425 - AluJb SINE Alu -14 298 158 1340 237 101 22 chr17 2030144 2030650 -87473903 + L1ME2 LINE L1 4084 4629 -1517 964 227 123 74 chr17 2030652 2030851 -87473702 + L1ME2 LINE L1 4796 4984 -1180 1881 175 14 0 chr17 2030851 2031143 -87473410 + AluJb SINE Alu 1 296 -16 2201 115 0 3 chr17 2031150 2031438 -87473115 + AluSx SINE Alu 5 291 -21 964 227 123 74 chr17 2031438 2031489 -87473064 + L1ME2 LINE L1 4989 5036 -1128 1288 186 90 21 chr17 2031489 2031779 -87472774 - AluJb SINE Alu -2 310 1 1991 114 30 30 chr17 2031788 2031948 -87472605 - AluSx SINE Alu -14 298 136 2400 94 0 0 chr17 2031948 2032245 -87472308 - AluY SINE Alu -14 297 1 1991 114 30 30 chr17 2032245 2032382 -87472171 - AluSx SINE Alu -175 137 1 2051 127 0 44 chr17 2032387 2032555 -87471998 - AluSx SINE Alu -11 301 152 2357 81 0 3 chr17 2032555 2032850 -87471703 - AluY SINE Alu -17 294 1 2051 127 0 44 chr17 2032850 2032996 -87471557 - AluSx SINE Alu -160 152 1 964 227 123 74 chr17 2032996 2033334 -87471219 + L1ME2 LINE L1 5046 5436 -728 1595 188 31 10 chr17 2033334 2033622 -87470931 + AluJo SINE Alu 1 294 -18 964 227 123 74 chr17 2033622 2033781 -87470772 + L1ME2 LINE L1 5436 5586 -578 1126 144 51 0 chr17 2033787 2033982 -87470571 + MER30 DNA MER1_type 26 230 0 1660 196 50 30 chr17 2033992 2034390 -87470163 + L1ME2 LINE L1 5587 5992 -172 335 274 0 32 chr17 2034404 2034499 -87470054 - L1MC4 LINE L1 -1334 6708 6617 936 151 81 29 chr17 2034512 2034684 -87469869 - AluJb SINE Alu -47 265 85 189 0 0 0 chr17 2034684 2034705 -87469848 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1910 121 4 4 chr17 2034710 2034967 -87469586 - AluSx SINE Alu -37 275 19 2527 209 43 34 chr17 2038359 2038521 -87466032 + L1M4 LINE L1 4498 4657 -1489 2129 145 0 0 chr17 2038521 2038825 -87465728 + AluSx SINE Alu 1 304 -8 2527 209 43 34 chr17 2038825 2039297 -87465256 + L1M4 LINE L1 4657 5141 -1005 1962 139 34 0 chr17 2039297 2039592 -87464961 + AluSx SINE Alu 1 305 -7 2527 209 43 34 chr17 2039592 2039630 -87464923 + L1M4 LINE L1 5141 5177 -969 563 193 0 35 chr17 2039630 2039744 -87464809 + AluJb SINE Alu 11 120 -192 408 181 0 0 chr17 2039744 2039827 -87464726 + (CA)n Simple_repeat Simple_repeat 1 83 0 1232 150 0 0 chr17 2039849 2040029 -87464524 + AluJb SINE Alu 132 311 -1 1231 120 89 4 chr17 2040029 2040254 -87464299 + L1MB4 LINE L1 5904 6147 -33 330 22 0 0 chr17 2041138 2041184 -87463369 + L1MB3 LINE L1 6138 6183 0 504 279 8 0 chr17 2041185 2041307 -87463246 - MER3 DNA MER1_type -81 128 6 1812 95 26 0 chr17 2041465 2041763 -87462790 + AluSx SINE Alu 63 366 0 1406 181 102 11 chr17 2041928 2042193 -87462360 + AluJb SINE Alu 1 289 -23 282 333 42 42 chr17 2042202 2042374 -87462179 + L1M4 LINE L1 3852 4026 -2120 2269 124 0 0 chr17 2042374 2042680 -87461873 + AluSx SINE Alu 1 306 -6 282 333 42 42 chr17 2042680 2042768 -87461785 + L1M4 LINE L1 4025 4112 -2034 2683 40 0 3 chr17 2042836 2043140 -87461413 + AluYb8 SINE Alu 5 307 -11 465 213 69 23 chr17 2043154 2043328 -87461225 + L1M4 LINE L1 4378 4559 -1587 1893 74 12 4 chr17 2043620 2043863 -87460690 + AluSg SINE Alu 44 288 -22 304 206 32 90 chr17 2043981 2044136 -87460417 - L1MC5 LINE L1 0 7961 7816 2162 107 0 20 chr17 2044151 2044449 -87460104 - AluSg SINE Alu -18 292 1 2044 125 0 38 chr17 2044628 2044941 -87459612 + AluSx SINE Alu 1 301 -11 517 192 0 0 chr17 2044942 2045020 -87459533 - AluJ/FLAM SINE Alu -232 80 3 560 252 19 44 chr17 2045034 2045193 -87459360 + L2 LINE L2 3156 3310 -3 1118 170 58 0 chr17 2045647 2045835 -87458718 - AluJb SINE Alu -17 295 97 1982 125 4 0 chr17 2045835 2046107 -87458446 + AluSx SINE Alu 24 296 -16 258 260 78 0 chr17 2046308 2046385 -87458168 + MLT1J LTR MaLR 5 87 -424 869 205 0 6 chr17 2046399 2046555 -87457998 - FRAM SINE Alu -25 151 1 456 269 156 48 chr17 2046555 2046908 -87457645 + MLT1J LTR MaLR 75 465 -46 309 300 133 40 chr17 2046935 2047014 -87457539 + MIR SINE MIR 59 129 -133 2007 105 14 14 chr17 2047014 2047299 -87457254 + AluSg SINE Alu 26 310 0 309 300 133 40 chr17 2047299 2047369 -87457184 + MIR SINE MIR 129 222 -40 2309 120 0 0 chr17 2047722 2048030 -87456523 - AluSx SINE Alu -4 308 1 1569 156 40 13 chr17 2048036 2048338 -87456215 - L1MA7 LINE L1 0 6291 5982 762 181 12 6 chr17 2048384 2048544 -87456009 + MER3 DNA MER1_type 5 165 -44 1681 184 25 4 chr17 2048555 2048833 -87455720 - AluJb SINE Alu -28 284 1 426 20 0 0 chr17 2048833 2048847 -87455706 + (TG)n Simple_repeat Simple_repeat 1 65 0 426 20 0 0 chr17 2048847 2048898 -87455655 + (TG)n Simple_repeat Simple_repeat 2 52 0 1961 101 75 0 chr17 2048925 2049193 -87455360 - AluSx SINE Alu -24 288 1 1896 135 3 30 chr17 2049727 2050024 -87454529 + AluJb SINE Alu 1 289 -23 2216 108 7 0 chr17 2052269 2052565 -87451988 - AluSx SINE Alu -9 303 6 2202 107 7 0 chr17 2052584 2052874 -87451679 - AluSx SINE Alu -20 292 1 21 36 0 0 chr17 2053149 2053177 -87451376 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr17 2054813 2054839 -87449714 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 685 188 9 0 chr17 2054972 2055084 -87449469 - MER81 DNA DNA -1 113 1 234 0 0 0 chr17 2055271 2055297 -87449256 + (T)n Simple_repeat Simple_repeat 1 26 0 820 167 0 0 chr17 2055542 2055674 -87448879 + FLAM_C SINE Alu 1 132 -1 2255 107 13 0 chr17 2056675 2056975 -87447578 - AluSq SINE Alu -9 304 1 2294 88 10 0 chr17 2056987 2057281 -87447272 - AluSx SINE Alu -15 297 1 811 221 80 6 chr17 2057338 2057501 -87447052 + FAM SINE Alu 1 175 0 426 272 47 67 chr17 2057526 2057780 -87446773 - L1ME LINE L1 -370 5751 5503 2635 31 0 0 chr17 2057821 2058115 -87446438 - AluY SINE Alu -17 294 1 1869 186 3 0 chr17 2058594 2058900 -87445653 - AluJo SINE Alu -5 307 1 182 61 0 30 chr17 2058904 2058937 -87445616 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1007 83 0 0 chr17 2058937 2059058 -87445495 - AluY SINE Alu -190 121 1 566 240 128 25 chr17 2059062 2059304 -87445249 - L1MC4a LINE L1 -1830 5978 5712 394 296 53 4 chr17 2059320 2059479 -87445074 - L1MC4a LINE L1 -580 5662 5500 753 122 16 0 chr17 2061226 2061349 -87443204 + L1PB1 LINE L1 5742 5866 -285 2335 111 3 3 chr17 2061349 2061656 -87442897 - AluSq SINE Alu -6 307 1 1453 179 4 12 chr17 2062287 2062538 -87442015 + AluJb SINE Alu 1 249 -63 1562 151 4 12 chr17 2070376 2070627 -87433926 + AluJo SINE Alu 30 278 -34 290 197 26 0 chr17 2070630 2070706 -87433847 + GA-rich Low_complexity Low_complexity 3 80 0 1242 211 48 0 chr17 2070850 2071120 -87433433 - MER58B DNA MER1_type -2 339 57 423 0 0 0 chr17 2071151 2071198 -87433355 + (CA)n Simple_repeat Simple_repeat 2 48 0 184 121 45 45 chr17 2071236 2071302 -87433251 + (CAGG)n Simple_repeat Simple_repeat 2 67 0 254 291 8 8 chr17 2071357 2071484 -87433069 + (CA)n Simple_repeat Simple_repeat 1 127 0 1861 169 0 3 chr17 2071485 2071780 -87432773 + AluSx SINE Alu 1 294 -18 2306 118 3 0 chr17 2071781 2072086 -87432467 + AluSq SINE Alu 1 306 -7 2354 98 13 7 chr17 2072086 2072392 -87432161 + AluSx SINE Alu 1 308 -4 207 284 11 21 chr17 2072471 2072566 -87431987 + (CATA)n Simple_repeat Simple_repeat 1 94 0 212 254 11 79 chr17 2072617 2072794 -87431759 + (CAGA)n Simple_repeat Simple_repeat 4 168 0 * 236 234 0 65 chr17 2072693 2072800 -87431753 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 323 161 151 21 chr17 2072816 2072909 -87431644 + L1MB3 LINE L1 6079 6183 0 278 333 0 33 chr17 2073064 2073217 -87431336 + G-rich Low_complexity Low_complexity 2 149 0 1810 125 3 97 chr17 2073349 2073678 -87430875 + AluJb SINE Alu 1 298 -14 2244 188 41 46 chr17 2074547 2075131 -87429422 + L1MC4 LINE L1 7462 8042 0 329 323 39 8 chr17 2075990 2076117 -87428436 + MIR SINE MIR 117 247 -15 318 48 0 0 chr17 2076349 2076391 -87428162 + 5S rRNA rRNA 1 42 -79 313 162 118 0 chr17 2076492 2076560 -87427993 + MIR SINE MIR 187 262 0 239 331 74 33 chr17 2078430 2078551 -87426002 - L2 LINE L2 -14 3258 3133 203 241 0 19 chr17 2079519 2079573 -87424980 + G-rich Low_complexity Low_complexity 5 57 0 2075 160 108 5 chr17 2080458 2080846 -87423707 + MSTA LTR MaLR 1 428 0 1399 142 158 24 chr17 2081241 2081495 -87423058 - AluSg1 SINE Alu -21 288 1 266 367 51 25 chr17 2081614 2081810 -87422743 - L2 LINE L2 -493 2821 2621 807 141 0 16 chr17 2081970 2082091 -87422462 + FLAM_C SINE Alu 1 119 -24 216 86 0 0 chr17 2082091 2082126 -87422427 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 194 326 0 0 chr17 2082879 2082925 -87421628 + L2 LINE L2 3140 3185 -87 455 238 90 13 chr17 2083099 2083261 -87421292 - MIR SINE MIR -56 206 34 630 244 34 118 chr17 2083417 2083543 -87421010 + L1MD2 LINE L1 4358 4493 -1653 2134 100 19 32 chr17 2083543 2083852 -87420701 + AluSx SINE Alu 1 305 -7 630 244 34 118 chr17 2083852 2084139 -87420414 + L1MD2 LINE L1 4493 4736 -1410 636 211 55 0 chr17 2084155 2084283 -87420270 + AluJo SINE Alu 2 136 -176 5296 187 25 40 chr17 2084286 2084686 -87419867 + L1MD2 LINE L1 4889 5293 -1066 1794 168 16 10 chr17 2084686 2084995 -87419558 + AluJb SINE Alu 1 311 -1 5296 187 25 40 chr17 2084995 2086083 -87418470 + L1MD2 LINE L1 5293 6349 -10 252 111 0 0 chr17 2086339 2086384 -87418169 + (A)n Simple_repeat Simple_repeat 1 45 0 505 139 0 40 chr17 2086756 2086997 -87417556 + AluJ SINE Alu 2 312 0 21 36 0 0 chr17 2086997 2087025 -87417528 + AT_rich Low_complexity Low_complexity 1 28 0 2048 123 7 10 chr17 2087028 2087321 -87417232 + AluSx SINE Alu 1 292 -20 2205 123 3 0 chr17 2087323 2087623 -87416930 - AluSx SINE Alu -9 303 3 1260 73 6 0 chr17 2087767 2087931 -87416622 - L1PA5 LINE L1 -4 6150 5986 825 169 0 0 chr17 2087946 2088070 -87416483 - FLAM_C SINE Alu -19 124 1 759 150 0 18 chr17 2088114 2088332 -87416221 - AluJb SINE Alu -15 297 2 1927 184 147 42 chr17 2088438 2088820 -87415733 + L1ME1 LINE L1 5143 5484 -682 1689 155 58 0 chr17 2088820 2089098 -87415455 + AluSx SINE Alu 5 298 -14 1927 184 147 42 chr17 2089098 2089146 -87415407 + L1ME1 LINE L1 5484 5526 -640 2263 114 0 0 chr17 2089146 2089443 -87415110 + AluSx SINE Alu 1 297 -15 1927 184 147 42 chr17 2089443 2089661 -87414892 + L1ME1 LINE L1 5526 5828 -338 1640 186 3 14 chr17 2089684 2089974 -87414579 + AluJo SINE Alu 14 300 -12 353 300 50 50 chr17 2090074 2090294 -87414259 - MIR SINE MIR -19 243 24 975 182 0 13 chr17 2091376 2091535 -87413018 - AluJb SINE Alu -22 290 134 1681 198 3 0 chr17 2092086 2092369 -87412184 + AluSx SINE Alu 1 284 -28 2117 105 0 51 chr17 2092474 2092789 -87411764 - AluSx SINE Alu -13 299 1 201 167 0 0 chr17 2093182 2093218 -87411335 + (TA)n Simple_repeat Simple_repeat 1 36 0 1931 166 0 0 chr17 2093218 2093513 -87411040 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 2093612 2093642 -87410911 + AT_rich Low_complexity Low_complexity 1 30 0 1787 147 48 27 chr17 2093707 2094000 -87410553 + AluJo SINE Alu 1 299 -13 1947 143 0 23 chr17 2094003 2094338 -87410215 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 2094346 2094389 -87410164 + AT_rich Low_complexity Low_complexity 1 43 0 1648 164 12 53 chr17 2094394 2094717 -87409836 + AluSx SINE Alu 1 310 -2 201 254 0 0 chr17 2094999 2095058 -87409495 + (TA)n Simple_repeat Simple_repeat 1 59 0 943 160 0 18 chr17 2095387 2095556 -87408997 + FRAM SINE Alu 1 166 0 200 398 42 0 chr17 2095982 2096100 -87408453 - L2 LINE L2 -4 3268 3146 1581 181 57 0 chr17 2096304 2096585 -87407968 + AluJb SINE Alu 3 299 -13 1828 128 36 43 chr17 2096613 2096777 -87407776 - AluSx SINE Alu -9 303 140 2199 101 7 3 chr17 2096777 2097064 -87407489 - AluSx SINE Alu -20 292 5 1828 128 36 43 chr17 2097064 2097204 -87407349 - AluSx SINE Alu -172 140 1 198 209 0 0 chr17 2097251 2097294 -87407259 - MIR SINE MIR 0 262 220 793 242 10 48 chr17 2097359 2097644 -87406909 + LTR16A LTR ERVL 107 434 -16 800 178 0 0 chr17 2097682 2097817 -87406736 - FLAM_A SINE Alu 0 142 8 28 0 0 0 chr17 2098161 2098189 -87406364 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 2098498 2098521 -87406032 + AT_rich Low_complexity Low_complexity 1 23 0 2502 57 0 7 chr17 2098787 2099088 -87405465 + AluY SINE Alu 1 299 -12 437 212 144 17 chr17 2100413 2100531 -87404022 + MER94 DNA DNA 1 133 -1 213 121 0 0 chr17 2102617 2102650 -87401903 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr17 2104594 2104630 -87399923 + AT_rich Low_complexity Low_complexity 1 36 0 239 218 91 18 chr17 2104658 2104823 -87399730 - L1ME4a LINE L1 -33 6088 5912 2266 97 0 7 chr17 2105134 2105444 -87399109 + AluSc SINE Alu 2 309 0 2324 66 11 0 chr17 2105672 2105959 -87398594 + AluY SINE Alu 1 290 -21 1318 160 22 9 chr17 2106181 2106412 -87398141 + L1MC1 LINE L1 6095 6328 -5 182 191 64 0 chr17 2106437 2106484 -87398069 - L2 LINE L2 -3 3310 3261 2132 128 0 0 chr17 2106507 2106819 -87397734 + AluSx SINE Alu 1 312 0 521 266 46 66 chr17 2106849 2106909 -87397644 + L1ME LINE L1 5517 5577 -585 1822 165 0 52 chr17 2106909 2107237 -87397316 + AluJo SINE Alu 1 311 -1 521 266 46 66 chr17 2107237 2107329 -87397224 + L1ME LINE L1 5577 5669 -493 1545 183 68 4 chr17 2107329 2107608 -87396945 - AluJb SINE Alu -15 297 1 521 266 46 66 chr17 2107608 2107753 -87396800 + L1ME LINE L1 5669 5800 -362 1969 133 4 0 chr17 2107753 2108023 -87396530 + AluJo SINE Alu 1 271 -41 521 266 46 66 chr17 2108023 2108042 -87396511 + L1ME LINE L1 5800 5818 -344 302 93 0 0 chr17 2108073 2108116 -87396437 + MADE1 DNA Mariner 2 44 -36 2265 132 91 5 chr17 2108560 2108954 -87395599 + MSTA LTR MaLR 1 428 0 1875 134 35 3 chr17 2109155 2109439 -87395114 - AluSx SINE Alu -19 293 1 939 269 57 61 chr17 2109462 2110142 -87394411 - L2 LINE L2 -5 3308 2625 186 43 0 0 chr17 2111321 2111344 -87393209 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 299 275 62 39 chr17 2111383 2111561 -87392992 + L1MEd LINE L1 5 186 -5933 500 289 98 48 chr17 2111779 2112116 -87392437 + L1MEd LINE L1 860 1179 -1805 324 0 0 0 chr17 2112116 2112152 -87392401 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 500 289 98 48 chr17 2112152 2112595 -87391958 + L1MEd LINE L1 1179 1598 -1386 1740 131 10 89 chr17 2112595 2112908 -87391645 + AluSx SINE Alu 1 288 -24 500 289 98 48 chr17 2112908 2113313 -87391240 + L1MEd LINE L1 1598 2123 -861 * 3578 203 45 62 chr17 2113295 2113426 -87391127 + L1ME1 LINE L1 5187 5319 -847 2147 98 4 0 chr17 2113426 2113702 -87390851 + AluSp SINE Alu 34 310 -3 2004 116 18 4 chr17 2113703 2114017 -87390536 + AluSg SINE Alu 1 318 0 2032 99 0 31 chr17 2114026 2114318 -87390235 + AluSx SINE Alu 14 296 -16 3578 203 45 62 chr17 2114318 2115150 -87389403 + L1ME1 LINE L1 5327 6162 -4 591 233 91 47 chr17 2115221 2115455 -87389098 + L1ME3A LINE L1 5708 5948 -218 2082 135 0 26 chr17 2115458 2115632 -87388921 - AluSx SINE Alu -9 303 139 2275 85 7 10 chr17 2115632 2115927 -87388626 - AluSq SINE Alu -19 294 1 2082 135 0 26 chr17 2115927 2116063 -87388490 - AluSx SINE Alu -173 139 1 228 135 0 0 chr17 2116079 2116116 -87388437 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 387 235 45 68 chr17 2116159 2116291 -87388262 + L1ME3A LINE L1 5965 6093 -77 284 276 97 48 chr17 2116892 2117037 -87387516 + MIR SINE MIR 72 223 -39 2593 80 0 0 chr17 2117304 2117644 -87386909 + AluSx SINE Alu 1 340 0 279 0 0 0 chr17 2117706 2117737 -87386816 + (A)n Simple_repeat Simple_repeat 1 31 0 2257 82 0 4 chr17 2118816 2119097 -87385456 + AluSg SINE Alu 1 280 -30 24 32 0 0 chr17 2119624 2119655 -87384898 + AT_rich Low_complexity Low_complexity 1 31 0 224 304 0 0 chr17 2119913 2119969 -87384584 - L2 LINE L2 -3 3269 3214 23 54 0 0 chr17 2121638 2121675 -87382878 + AT_rich Low_complexity Low_complexity 1 37 0 2095 111 3 3 chr17 2121675 2121963 -87382590 - AluSx SINE Alu -24 288 1 21 36 0 0 chr17 2122095 2122123 -87382430 + AT_rich Low_complexity Low_complexity 1 28 0 1104 129 6 6 chr17 2122123 2122286 -87382267 - AluSg/x SINE Alu -27 283 121 192 40 0 0 chr17 2123163 2123188 -87381365 + (GGGAA)n Simple_repeat Simple_repeat 3 27 0 459 0 0 0 chr17 2124102 2124153 -87380400 + (CA)n Simple_repeat Simple_repeat 1 51 0 2111 93 72 0 chr17 2124490 2124768 -87379785 - AluSq SINE Alu -15 298 1 22 35 0 0 chr17 2126207 2126236 -87378317 + AT_rich Low_complexity Low_complexity 1 29 0 338 174 116 12 chr17 2126797 2126883 -87377670 + L1ME4a LINE L1 5710 5804 -317 419 224 68 20 chr17 2126971 2127118 -87377435 + L1ME4a LINE L1 5944 6097 -24 25 51 0 0 chr17 2127207 2127246 -87377307 + AT_rich Low_complexity Low_complexity 1 39 0 246 273 91 53 chr17 2127896 2128028 -87376525 - MIR3 SINE MIR -1 207 71 270 195 26 52 chr17 2128648 2128725 -87375828 - L3b LINE CR1 -87 1496 1422 825 108 0 25 chr17 2128971 2129091 -87375462 - FLAM_C SINE Alu -16 117 1 898 202 106 5 chr17 2129307 2129505 -87375048 + MER20 DNA MER1_type 2 219 0 2345 67 0 57 chr17 2129631 2129946 -87374607 + AluY SINE Alu 1 297 -14 882 157 119 0 chr17 2129956 2130115 -87374438 + FAM SINE Alu 1 49 0 2089 128 3 0 chr17 2130799 2131088 -87373465 + AluSx SINE Alu 1 290 -22 2001 140 3 0 chr17 2132784 2133084 -87371469 - AluSx SINE Alu -10 302 2 1882 146 3 7 chr17 2133087 2133382 -87371171 - AluJo SINE Alu -18 294 1 471 285 39 0 chr17 2133383 2133513 -87371040 - Charlie8 DNA MER1_type -2278 139 5 2261 99 0 3 chr17 2134064 2134377 -87370176 + AluSq SINE Alu 1 312 -1 222 260 52 39 chr17 2134405 2134482 -87370071 - MIR SINE MIR -99 109 32 185 206 0 0 chr17 2134523 2134557 -87369996 + MIR SINE MIR 65 98 -164 457 231 34 0 chr17 2134615 2134732 -87369821 + L1MC4 LINE L1 7922 8042 0 1935 130 23 0 chr17 2134906 2135206 -87369347 + AluSx SINE Alu 1 307 -5 1941 123 41 0 chr17 2135212 2135330 -87369223 + AluSg SINE Alu 1 113 -197 222 37 0 0 chr17 2135330 2135357 -87369196 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1941 123 41 0 chr17 2135357 2135531 -87369022 + AluSg SINE Alu 113 305 -5 251 275 14 14 chr17 2135604 2135673 -87368880 - MIR3 SINE MIR -129 79 11 2303 51 0 24 chr17 2136292 2136586 -87367967 - AluY SINE Alu -17 294 8 1295 184 3 89 chr17 2136696 2137023 -87367530 - AluJo SINE Alu -12 300 2 1750 158 14 0 chr17 2137793 2138084 -87366469 - AluJo SINE Alu -17 295 1 2314 78 7 0 chr17 2139220 2139529 -87365024 + AluSp SINE Alu 1 311 -2 2121 86 41 0 chr17 2139532 2139824 -87364729 + AluSc SINE Alu 1 304 -5 355 331 35 14 chr17 2139887 2140032 -87364521 + MIR3 SINE MIR 2 149 -59 355 293 67 43 chr17 2140051 2140215 -87364338 - MER5B DNA MER1_type -10 168 1 1740 152 26 69 chr17 2140231 2140520 -87364033 + MER58B DNA MER1_type 9 283 -2137 1956 60 0 8 chr17 2140520 2140808 -87363745 - AluY SINE Alu 0 321 36 1740 152 26 69 chr17 2140808 2140865 -87363688 + MER58B DNA MER1_type 283 341 0 1907 147 0 0 chr17 2141736 2142035 -87362518 - AluSx SINE Alu -13 299 1 341 321 177 55 chr17 2142114 2142441 -87362112 - L2 LINE L2 0 3272 2906 2785 7 0 0 chr17 2142523 2142833 -87361720 + AluY SINE Alu 1 310 -1 333 236 14 0 chr17 2142847 2142919 -87361634 - L2 LINE L2 -561 2753 2681 5330 54 9 6 chr17 2142937 2143624 -87360929 + SVA Other Other 719 1386 0 1578 171 0 43 chr17 2143880 2144184 -87360369 + AluJb SINE Alu 1 291 -21 225 83 0 0 chr17 2144352 2144388 -87360165 + (TATG)n Simple_repeat Simple_repeat 2 37 0 974 108 0 51 chr17 2144390 2144481 -87360072 - AluSg/x SINE Alu -26 283 202 2222 77 20 3 chr17 2144481 2144778 -87359775 - AluSc SINE Alu -7 302 1 974 108 0 51 chr17 2144778 2144843 -87359710 - AluSg/x SINE Alu -107 202 135 359 220 43 26 chr17 2144968 2145094 -87359459 + L2 LINE L2 2764 2952 -361 1991 107 30 3 chr17 2145137 2145436 -87359117 + AluSg SINE Alu 1 307 -3 267 103 0 0 chr17 2145439 2145478 -87359075 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 225 176 7 chr17 2145493 2145635 -87358918 - MIR SINE MIR -10 252 87 1900 140 3 7 chr17 2145674 2145974 -87358579 + AluSx SINE Alu 1 299 -13 1277 164 22 4 chr17 2145981 2146213 -87358340 + AluJo SINE Alu 61 296 -16 1762 130 58 0 chr17 2146219 2146496 -87358057 + AluSg SINE Alu 6 298 -12 1629 118 121 4 chr17 2146823 2147095 -87357458 + AluJb SINE Alu 1 304 -8 2175 105 0 13 chr17 2148113 2148426 -87356127 + AluSx SINE Alu 1 309 -3 2260 82 0 25 chr17 2148426 2148740 -87355813 + AluY SINE Alu 1 307 -4 302 272 12 0 chr17 2148764 2148845 -87355708 + L1ME3A LINE L1 6065 6146 -24 1967 151 0 0 chr17 2152020 2152318 -87352235 + AluSx SINE Alu 1 298 -14 380 222 86 0 chr17 2152557 2152638 -87351915 + MER20B DNA MER1_type 88 175 -608 1934 99 35 0 chr17 2152638 2152922 -87351631 + AluSx SINE Alu 1 294 -18 515 182 159 30 chr17 2153023 2153155 -87351398 - MER58C DNA MER1_type -8 207 59 1292 188 38 24 chr17 2154613 2154900 -87349653 - AluJb SINE Alu -20 292 2 2376 78 0 0 chr17 2155098 2155447 -87349106 - AluY SINE Alu 0 349 1 738 188 8 0 chr17 2155474 2155602 -87348951 - FLAM_C SINE Alu -12 131 3 1862 133 0 41 chr17 2155895 2156030 -87348523 + AluSx SINE Alu 5 144 -168 2205 82 0 3 chr17 2156030 2156322 -87348231 + AluY SINE Alu 1 291 -20 2292 57 0 51 chr17 2156326 2156642 -87347911 + AluY SINE Alu 4 303 -8 1862 133 0 41 chr17 2156642 2156816 -87347737 + AluSx SINE Alu 147 306 -6 348 325 17 8 chr17 2157162 2157279 -87347274 - MIR SINE MIR -88 174 57 1009 168 0 0 chr17 2157283 2157450 -87347103 + FRAM SINE Alu 1 167 -9 1647 181 10 3 chr17 2157730 2158022 -87346531 + AluJo SINE Alu 3 296 -16 516 135 14 0 chr17 2158419 2158493 -87346060 + AluJ/FLAM SINE Alu 2 76 -236 1805 130 91 0 chr17 2158506 2158791 -87345762 - AluSx SINE Alu -1 311 1 2181 110 0 3 chr17 2158832 2159141 -87345412 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 2159145 2159166 -87345387 + AT_rich Low_complexity Low_complexity 1 21 0 185 289 0 0 chr17 2159635 2159680 -87344873 + L2 LINE L2 2933 2977 -336 2886 185 25 74 chr17 2159832 2160057 -87344496 - MER82 DNA MER2_type 0 653 418 2168 73 28 0 chr17 2160057 2160343 -87344210 + AluY SINE Alu 1 294 -17 2886 185 25 74 chr17 2160343 2160634 -87343919 - MER82 DNA MER2_type -235 418 177 1800 139 0 32 chr17 2160634 2160779 -87343774 + AluSx SINE Alu 1 149 -163 1688 120 94 0 chr17 2160779 2161054 -87343499 + AluSg SINE Alu 1 301 -9 1800 139 0 32 chr17 2161054 2161218 -87343335 + AluSx SINE Alu 149 300 -12 2886 185 25 74 chr17 2161218 2161387 -87343166 - MER82 DNA MER2_type -476 177 1 1190 197 33 0 chr17 2161428 2161641 -87342912 + MER58A DNA MER1_type 1 220 -4 715 188 0 0 chr17 2162248 2162360 -87342193 + FLAM_C SINE Alu 9 120 -23 2001 128 0 0 chr17 2162540 2162836 -87341717 + AluSx SINE Alu 1 296 -16 1920 127 27 3 chr17 2163794 2164086 -87340467 - AluSp SINE Alu -14 299 1 2297 81 3 0 chr17 2164186 2164481 -87340072 - AluSp SINE Alu -17 296 1 2279 46 11 0 chr17 2164524 2164865 -87339688 - AluY SINE Alu 0 344 1 1641 182 0 10 chr17 2165163 2165459 -87339094 + AluJb SINE Alu 1 293 -19 2238 90 0 7 chr17 2165605 2165905 -87338648 - AluSx SINE Alu -14 298 1 252 269 35 122 chr17 2166022 2166080 -87338473 + L2 LINE L2 2689 2750 -564 655 143 17 0 chr17 2166080 2166199 -87338354 + L1MA4 LINE L1 6169 6289 -11 252 269 35 122 chr17 2166199 2166337 -87338216 + L2 LINE L2 2750 2868 -446 * 725 315 76 60 chr17 2166329 2167151 -87337402 - L2 LINE L2 -2 3270 2453 2259 86 0 7 chr17 2167661 2167963 -87336590 - AluSg SINE Alu -10 300 1 1172 173 122 0 chr17 2168216 2168453 -87336100 + AluJo SINE Alu 16 281 -31 322 141 218 39 chr17 2168466 2168544 -87336009 - AluJb SINE Alu -10 292 201 1399 181 50 11 chr17 2168552 2168829 -87335724 - AluJo SINE Alu -24 288 1 607 307 100 40 chr17 2168829 2169351 -87335202 + L2 LINE L2 2464 3020 -252 223 293 311 0 chr17 2169435 2169541 -87335012 + L2 LINE L2 3174 3312 -1 225 0 0 0 chr17 2169791 2169816 -87334737 + (A)n Simple_repeat Simple_repeat 1 25 0 2132 109 3 0 chr17 2170289 2170583 -87333970 + AluSq SINE Alu 1 295 -18 392 153 0 0 chr17 2170898 2170957 -87333596 - U4 snRNA snRNA -86 59 1 21 0 0 0 chr17 2171750 2171771 -87332782 + AT_rich Low_complexity Low_complexity 1 21 0 237 273 26 0 chr17 2171842 2171919 -87332634 + GA-rich Low_complexity Low_complexity 1 79 0 289 323 139 27 chr17 2172069 2172292 -87332261 + MIR SINE MIR 15 262 0 473 210 49 49 chr17 2172337 2172499 -87332054 + MER104 DNA Tc2 1 162 -18 4796 187 30 30 chr17 2172850 2172957 -87331596 + L1MB2 LINE L1 4280 4386 -1785 624 199 0 57 chr17 2172957 2173069 -87331484 + AluJo/FLAM SINE Alu 1 105 -197 2128 125 0 0 chr17 2173069 2173374 -87331179 - AluSx SINE Alu -7 305 1 624 199 0 57 chr17 2173374 2173402 -87331151 + AluJo/FLAM SINE Alu 105 133 -169 4796 187 30 30 chr17 2173402 2174324 -87330229 + L1MB2 LINE L1 4386 5318 -853 2313 51 41 0 chr17 2174324 2174619 -87329934 - AluYa5 SINE Alu -4 307 1 4796 187 30 30 chr17 2174619 2175430 -87329123 + L1MB2 LINE L1 5318 6128 -43 2097 115 0 0 chr17 2175432 2175728 -87328825 + AluSx SINE Alu 1 296 -16 1788 152 14 7 chr17 2175740 2176037 -87328516 + AluSx SINE Alu 3 301 -11 1768 133 6 60 chr17 2176049 2176198 -87328355 + AluJb SINE Alu 1 126 -186 2564 43 0 0 chr17 2176198 2176501 -87328052 + AluY SINE Alu 1 303 -8 1768 133 6 60 chr17 2176501 2176668 -87327885 + AluJb SINE Alu 126 300 -12 1671 159 3 7 chr17 2176674 2176957 -87327596 + AluJo SINE Alu 1 282 -30 1784 128 17 17 chr17 2177035 2177325 -87327228 + AluSx SINE Alu 2 291 -21 246 62 0 0 chr17 2177337 2177369 -87327184 + (TA)n Simple_repeat Simple_repeat 1 32 0 485 180 172 0 chr17 2177384 2177506 -87327047 + L1M4 LINE L1 5321 5463 -715 2711 196 68 44 chr17 2177506 2178290 -87326263 + L1MB5 LINE L1 4618 5425 -744 836 170 52 72 chr17 2178286 2178450 -87326103 + L1MB5 LINE L1 5893 6054 -120 * 2532 40 0 0 chr17 2178450 2178752 -87325801 + AluY SINE Alu 1 302 -9 836 170 52 72 chr17 2178752 2178781 -87325772 + L1MB5 LINE L1 6054 6082 -92 1185 131 115 37 chr17 2179028 2179272 -87325281 + AluJo SINE Alu 39 301 -11 252 281 176 8 chr17 2180668 2180801 -87323752 + MIR SINE MIR 32 190 -72 1951 122 0 14 chr17 2180883 2181170 -87323383 - AluSx SINE Alu -25 287 5 207 0 0 0 chr17 2181766 2181789 -87322764 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 288 343 50 70 chr17 2181840 2182279 -87322274 + L2 LINE L2 2827 3295 -18 2155 125 3 7 chr17 2182280 2182577 -87321976 - AluSx SINE Alu -16 296 1 356 266 176 38 chr17 2182766 2183033 -87321520 + L2 LINE L2 1698 2001 -1313 354 325 195 22 chr17 2183077 2183823 -87320730 + L2 LINE L2 2203 3082 -190 1038 160 155 0 chr17 2183848 2184042 -87320511 + MER1B DNA MER1_type 1 224 -73 404 169 14 0 chr17 2184040 2184111 -87320442 + MER1B DNA MER1_type 257 328 -5 * 2041 127 0 31 chr17 2184112 2184435 -87320118 + AluSq SINE Alu 1 313 0 315 320 0 0 chr17 2184535 2184613 -87319940 + L2 LINE L2 3194 3271 -1 272 133 17 0 chr17 2184964 2185024 -87319529 + (CA)n Simple_repeat Simple_repeat 2 62 0 2609 64 3 6 chr17 2185838 2186150 -87318403 + AluY SINE Alu 1 311 0 2138 68 0 0 chr17 2188961 2189227 -87315326 + AluY SINE Alu 1 266 -45 1934 152 0 0 chr17 2189371 2189660 -87314893 + AluJo SINE Alu 1 289 -23 2271 81 7 0 chr17 2189662 2189969 -87314584 + AluY SINE Alu 1 309 -2 228 269 0 13 chr17 2190920 2190998 -87313555 + G-rich Low_complexity Low_complexity 2 78 0 203 240 10 42 chr17 2191357 2191453 -87313100 + (CGAGG)n Simple_repeat Simple_repeat 2 94 0 2232 59 31 21 chr17 2191655 2191943 -87312610 - AluSx SINE Alu -21 291 1 977 89 0 41 chr17 2192029 2192175 -87312378 + AluSg/x SINE Alu 155 294 -16 593 299 48 51 chr17 2192791 2193085 -87311468 + HAL1 LINE L1 1116 1408 -1099 2452 79 7 3 chr17 2193095 2193399 -87311154 - AluSq SINE Alu -8 305 1 2082 104 17 3 chr17 2193436 2193725 -87310828 + AluSx SINE Alu 1 293 -19 2365 96 0 0 chr17 2193835 2194136 -87310417 + AluSx SINE Alu 1 301 -11 247 366 0 12 chr17 2194765 2194929 -87309624 + (TGG)n Simple_repeat Simple_repeat 1 162 0 235 264 64 16 chr17 2195476 2195601 -87308952 + L1M4 LINE L1 2873 3003 -3143 209 293 193 14 chr17 2195820 2195960 -87308593 + L2 LINE L2 2301 2465 -849 1692 117 144 4 chr17 2195977 2196233 -87308320 + AluSg1 SINE Alu 1 292 -17 2262 92 7 3 chr17 2196237 2196542 -87308011 + AluSq SINE Alu 1 306 0 807 170 0 0 chr17 2196542 2196663 -87307890 - AluJo SINE Alu -185 127 1 401 211 0 0 chr17 2197660 2197747 -87306806 - L1M3 LINE L1 -517 5639 5565 955 156 65 0 chr17 2197753 2197907 -87306646 - AluJb SINE Alu -148 164 1 1966 144 0 46 chr17 2197964 2198146 -87306407 - AluSx SINE Alu -1 311 149 2519 73 0 0 chr17 2198146 2198446 -87306107 - AluY SINE Alu -11 300 1 1966 144 0 46 chr17 2198446 2198589 -87305964 - AluSx SINE Alu -163 149 1 545 148 176 0 chr17 2198594 2198702 -87305851 - FRAM SINE Alu 0 176 50 1745 168 10 17 chr17 2198754 2199051 -87305502 + AluJb SINE Alu 1 295 -17 1872 175 0 28 chr17 2199328 2199648 -87304905 + AluJo SINE Alu 1 311 -1 420 240 124 46 chr17 2199649 2199715 -87304838 + L1ME4a LINE L1 5369 5428 -693 2237 109 0 0 chr17 2199715 2200008 -87304545 + AluY SINE Alu 2 294 -17 420 240 124 46 chr17 2200008 2200303 -87304250 + L1ME4a LINE L1 5428 5751 -370 830 215 80 6 chr17 2200328 2200491 -87304062 - FAM SINE Alu 0 175 1 2294 88 10 0 chr17 2200548 2200842 -87303711 + AluSx SINE Alu 1 297 -15 2298 106 10 0 chr17 2200854 2201155 -87303398 + AluSq SINE Alu 1 304 -9 241 267 33 33 chr17 2201285 2201405 -87303148 + L1ME4a LINE L1 6000 6119 -2 2252 114 0 7 chr17 2201568 2201702 -87302851 + AluSp SINE Alu 1 134 -179 2671 50 0 0 chr17 2201702 2202004 -87302549 + AluY SINE Alu 1 302 -9 2252 114 0 7 chr17 2202004 2202175 -87302378 + AluSp SINE Alu 134 304 -9 63 36 0 0 chr17 2202228 2202312 -87302241 + AT_rich Low_complexity Low_complexity 1 84 0 2474 74 3 0 chr17 2202362 2202660 -87301893 + AluSg SINE Alu 1 299 -11 199 302 78 35 chr17 2203149 2203265 -87301288 - MIR SINE MIR -32 230 110 188 135 27 0 chr17 2203377 2203414 -87301139 + (TA)n Simple_repeat Simple_repeat 1 38 0 1464 165 149 26 chr17 2203419 2203728 -87300825 + MER7A DNA MER2_type 1 345 -1 1111 117 29 133 chr17 2203948 2203998 -87300555 + AluSq SINE Alu 87 141 -172 1976 141 3 44 chr17 2203998 2204107 -87300446 + AluSx SINE Alu 4 116 -196 2092 76 10 45 chr17 2204107 2204422 -87300131 - AluY SINE Alu 0 305 1 1976 141 3 44 chr17 2204422 2204630 -87299923 + AluSx SINE Alu 116 309 -3 2338 66 0 13 chr17 2204630 2204934 -87299619 + AluY SINE Alu 1 300 -11 1111 117 29 133 chr17 2204934 2205122 -87299431 + AluSq SINE Alu 139 301 -12 194 309 62 0 chr17 2205131 2205212 -87299341 - L2 LINE L2 -775 2539 2454 2039 134 10 19 chr17 2205537 2205850 -87298703 - AluJb SINE Alu -2 310 1 2172 83 35 54 chr17 2205857 2206170 -87298383 - AluY SINE Alu -4 307 1 964 233 185 6 chr17 2206383 2206739 -87297814 + L2 LINE L2 2046 2465 -849 1199 153 42 0 chr17 2206792 2206981 -87297572 - AluJo SINE Alu -115 197 1 1173 258 132 53 chr17 2206983 2207212 -87297341 + L2 LINE L2 2466 2676 -637 2466 82 0 0 chr17 2207212 2207518 -87297035 - AluY SINE Alu -5 306 1 1173 258 132 53 chr17 2207518 2207652 -87296901 + L2 LINE L2 2676 2798 -515 2373 93 7 0 chr17 2207652 2207954 -87296599 - AluSg SINE Alu -6 304 1 2005 146 0 7 chr17 2207961 2208262 -87296291 - AluSx SINE Alu -13 299 1 1173 258 132 53 chr17 2208262 2208646 -87295907 + L2 LINE L2 2803 3313 0 2208 94 7 17 chr17 2209183 2209481 -87295072 - AluSg SINE Alu -15 295 1 889 138 15 0 chr17 2209499 2209629 -87294924 - FLAM_C SINE Alu -11 132 1 2389 58 0 52 chr17 2209903 2210212 -87294341 - AluY SINE Alu -14 297 5 1701 136 0 0 chr17 2210222 2210465 -87294088 - AluSq SINE Alu -70 243 1 904 224 5 14 chr17 2212371 2212581 -87291972 - MER6B DNA MER2_type -2 208 1 2353 96 0 3 chr17 2213009 2213311 -87291242 - AluSg SINE Alu -9 301 1 1050 142 0 0 chr17 2213322 2213477 -87291076 - AluSq SINE Alu -8 305 151 781 164 59 110 chr17 2214078 2214223 -87290330 - AluJo SINE Alu -62 250 99 2290 112 0 0 chr17 2214223 2214519 -87290034 + AluSq SINE Alu 1 296 -17 781 164 59 110 chr17 2214519 2214534 -87290019 - AluJo SINE Alu -213 99 85 1944 162 0 3 chr17 2214534 2214836 -87289717 + AluSx SINE Alu 1 301 -11 781 164 59 110 chr17 2214836 2214893 -87289660 - AluJo SINE Alu -227 85 43 273 307 81 25 chr17 2214913 2215196 -87289357 + L1ME4a LINE L1 5628 5926 -195 2159 112 31 0 chr17 2215369 2215663 -87288890 + AluSx SINE Alu 1 303 -9 813 109 23 62 chr17 2215665 2215793 -87288760 + AluSq/x SINE Alu 1 123 -189 1564 96 0 24 chr17 2215795 2216035 -87288518 + AluSg/x SINE Alu 92 310 0 2652 45 0 13 chr17 2216039 2216348 -87288205 + AluY SINE Alu 5 309 -2 239 147 0 0 chr17 2216411 2216445 -87288108 - Alu SINE Alu -94 39 6 2363 81 3 10 chr17 2217323 2217621 -87286932 - AluSp SINE Alu -17 296 1 2524 142 51 5 chr17 2218738 2219147 -87285406 + MSTA LTR MaLR 1 428 0 2587 67 0 3 chr17 2219955 2220267 -87284286 + AluY SINE Alu 1 311 0 185 347 51 20 chr17 2221625 2221723 -87282830 + L2 LINE L2 3199 3299 -14 195 291 36 0 chr17 2222594 2222649 -87281904 + L2 LINE L2 3200 3256 -16 21 0 0 0 chr17 2222847 2222868 -87281685 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr17 2224939 2224971 -87279582 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr17 2225213 2225269 -87279284 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr17 2225477 2225514 -87279039 + GC_rich Low_complexity Low_complexity 1 37 0 409 197 171 26 chr17 2225955 2226072 -87278481 + L2 LINE L2 3177 3310 -3 2262 86 0 0 chr17 2226192 2226471 -87278082 + AluSx SINE Alu 16 294 -18 2042 100 3 37 chr17 2226546 2226845 -87277708 + AluSg SINE Alu 1 289 -21 2135 70 56 7 chr17 2226845 2227130 -87277423 + AluY SINE Alu 1 300 -11 2174 82 43 4 chr17 2227525 2227805 -87276748 - AluSc SINE Alu -15 294 4 2401 57 0 13 chr17 2227992 2228293 -87276260 - AluY SINE Alu -13 298 2 1433 110 186 13 chr17 2228529 2228794 -87275759 - AluSg1 SINE Alu 0 306 1 1687 210 120 51 chr17 2229156 2229551 -87275002 + L1ME3A LINE L1 5512 5965 -205 2072 105 6 37 chr17 2229551 2229874 -87274679 + AluSq SINE Alu 1 313 0 1687 210 120 51 chr17 2229874 2230088 -87274465 + L1ME3A LINE L1 5965 6163 -7 2272 86 3 7 chr17 2230119 2230411 -87274142 + AluSx SINE Alu 1 291 -21 395 274 89 30 chr17 2231149 2231284 -87273269 + MER5B DNA MER1_type 1 143 -35 648 151 0 19 chr17 2231286 2231392 -87273161 - MER5A DNA MER1_type -1 188 85 449 301 24 48 chr17 2231967 2232176 -87272377 - L2 LINE L2 -2 3311 3108 525 255 123 19 chr17 2232200 2232412 -87272141 + MIR SINE MIR 22 255 -7 1108 44 7 15 chr17 2232640 2232776 -87271777 + AluSq/x SINE Alu 1 135 -178 2505 42 0 13 chr17 2232776 2233082 -87271471 + AluY SINE Alu 1 302 -9 295 238 69 30 chr17 2233083 2233184 -87271369 - Charlie8 DNA MER1_type -2312 105 1 1590 158 3 38 chr17 2234288 2234580 -87269973 + AluJo SINE Alu 1 282 -30 2062 94 0 14 chr17 2234581 2234895 -87269658 - AluSx SINE Alu 0 310 1 22 0 0 0 chr17 2234898 2234920 -87269633 + AT_rich Low_complexity Low_complexity 1 22 0 701 199 0 15 chr17 2235125 2235261 -87269292 - FLAM_A SINE Alu -1 141 8 434 132 92 0 chr17 2235818 2235894 -87268659 + FLAM SINE Alu 42 124 -19 256 237 129 11 chr17 2236062 2236155 -87268398 + MIR SINE MIR 17 120 -142 1660 117 11 25 chr17 2236256 2236565 -87267988 - AluJb SINE Alu 0 310 6 1993 119 3 7 chr17 2236600 2236893 -87267660 + AluSx SINE Alu 1 292 -20 605 196 110 83 chr17 2236987 2237288 -87267265 + L1MC5 LINE L1 7605 7913 -48 2348 60 0 10 chr17 2237299 2237600 -87266953 - AluY SINE Alu -13 298 1 991 111 7 0 chr17 2237600 2237735 -87266818 - AluSq/x SINE Alu -176 136 1 379 276 39 103 chr17 2237736 2237845 -87266708 - L2 LINE L2 -1635 1679 1591 2134 114 0 25 chr17 2237845 2238161 -87266392 + AluSx SINE Alu 5 312 0 379 276 39 103 chr17 2238161 2238283 -87266270 - L2 LINE L2 -1723 1591 1463 347 271 43 129 chr17 2238289 2238491 -87266062 - MIR SINE MIR -7 255 78 2134 99 0 7 chr17 2238491 2238783 -87265770 + AluSx SINE Alu 6 295 -17 347 271 43 129 chr17 2238783 2238835 -87265718 - MIR SINE MIR -184 78 23 965 145 12 18 chr17 2239168 2239334 -87265219 - AluSx SINE Alu -101 211 47 2682 19 0 6 chr17 2240295 2240608 -87263945 - AluY SINE Alu 0 311 1 419 290 93 52 chr17 2240943 2241017 -87263536 - L1MC4a LINE L1 -1633 6175 6106 1244 192 0 64 chr17 2241017 2241330 -87263223 + AluSx SINE Alu 1 293 -9 419 290 93 52 chr17 2241330 2241448 -87263105 - L1MC4a LINE L1 -1702 6106 5975 1787 174 13 7 chr17 2241455 2241760 -87262793 - AluJo SINE Alu -5 307 1 1006 68 8 8 chr17 2241770 2241902 -87262651 - AluY SINE Alu -179 132 1 500 301 130 17 chr17 2241905 2242326 -87262227 - L1MC4a LINE L1 -344 5822 5497 683 121 16 8 chr17 2244939 2245063 -87259490 + L1PB1 LINE L1 5742 5866 -285 2166 110 3 10 chr17 2245063 2245372 -87259181 - AluSq SINE Alu -6 307 1 1574 180 3 17 chr17 2246005 2246299 -87258254 + AluJb SINE Alu 1 290 -22 2175 87 0 13 chr17 2246444 2246755 -87257798 - AluY SINE Alu 0 311 5 1848 125 3 26 chr17 2247656 2247961 -87256592 + AluSx SINE Alu 4 301 -11 224 296 56 0 chr17 2248218 2248289 -87256264 - MIR3 SINE MIR -50 158 84 328 281 66 33 chr17 2248404 2248525 -87256028 + MIR SINE MIR 17 141 -67 2186 100 7 3 chr17 2253433 2253734 -87250819 - AluSg SINE Alu -8 302 1 285 383 14 16 chr17 2255705 2255855 -87248698 + MIR3 SINE MIR 4 136 -72 223 240 20 0 chr17 2257023 2257073 -87247480 + CT-rich Low_complexity Low_complexity 2 52 0 443 275 54 72 chr17 2259282 2259504 -87245049 + MIR SINE MIR 28 245 -17 248 309 74 9 chr17 2259685 2259793 -87244760 - MIR SINE MIR -60 148 33 190 369 16 41 chr17 2261416 2261538 -87243015 + MIR SINE MIR 83 201 -61 406 239 17 34 chr17 2261605 2261722 -87242831 + MIR SINE MIR 17 131 -77 1677 176 0 22 chr17 2262111 2262430 -87242123 + AluJb SINE Alu 1 312 0 2090 82 0 26 chr17 2265065 2265370 -87239183 + AluSg SINE Alu 1 297 -13 331 282 69 23 chr17 2265893 2266024 -87238529 - MER5B DNA MER1_type 0 178 42 668 172 0 83 chr17 2266027 2266172 -87238381 + FLAM_C SINE Alu 1 133 0 1510 131 173 19 chr17 2266181 2266441 -87238112 + AluSg SINE Alu 1 300 0 185 304 0 0 chr17 2266467 2266513 -87238040 + MER5B DNA MER1_type 131 176 -2 507 148 0 0 chr17 2266796 2266884 -87237669 + (CCCCAG)n Simple_repeat Simple_repeat 3 90 0 192 97 0 0 chr17 2269678 2269709 -87234844 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1302 186 45 11 chr17 2269709 2269978 -87234575 - AluJo SINE Alu -34 278 1 189 292 62 15 chr17 2270574 2270639 -87233914 + L2 LINE L2 3190 3257 -15 1992 91 0 24 chr17 2270802 2271099 -87233454 - AluSx SINE Alu -22 290 1 378 290 38 26 chr17 2271666 2271837 -87232716 + MIR SINE MIR 38 209 -53 360 64 0 0 chr17 2272573 2272620 -87231933 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 194 11 86 chr17 2275493 2275586 -87228967 + G-rich Low_complexity Low_complexity 2 87 0 2264 100 3 3 chr17 2277308 2277618 -87226935 - AluSp SINE Alu -3 310 1 1372 187 98 32 chr17 2278398 2278714 -87225839 + MER1B DNA MER1_type 1 337 0 2059 79 0 26 chr17 2279057 2279360 -87225193 - AluSx SINE Alu -17 295 1 219 287 44 52 chr17 2279499 2279635 -87224918 - L3b LINE CR1 -134 1449 1315 620 157 8 60 chr17 2279878 2280012 -87224541 - FLAM_A SINE Alu -2 131 5 220 350 29 10 chr17 2280068 2280171 -87224382 + L2 LINE L2 2957 3061 -211 246 185 33 43 chr17 2282019 2282111 -87222442 + G-rich Low_complexity Low_complexity 6 96 0 259 75 0 25 chr17 2282373 2282413 -87222140 + (CA)n Simple_repeat Simple_repeat 1 39 0 308 297 0 43 chr17 2283324 2283462 -87221091 + G-rich Low_complexity Low_complexity 4 135 0 196 260 0 55 chr17 2283721 2283794 -87220759 - L2 LINE L2 -41 3272 3204 203 267 17 17 chr17 2284119 2284179 -87220374 - MIR SINE MIR -71 137 78 209 259 35 12 chr17 2287107 2287192 -87217361 + C-rich Low_complexity Low_complexity 6 92 0 23 68 0 0 chr17 2288915 2288959 -87215594 + GC_rich Low_complexity Low_complexity 1 44 0 205 154 0 58 chr17 2289150 2289202 -87215351 + CT-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr17 2289286 2289315 -87215238 + GC_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr17 2290315 2290369 -87214184 + GC_rich Low_complexity Low_complexity 1 54 0 262 206 44 21 chr17 2290490 2290577 -87213976 - MIR SINE MIR -57 151 87 315 246 0 14 chr17 2291627 2291696 -87212857 + Tigger5 DNA MER2_type 1 68 -2255 2081 91 0 86 chr17 2292242 2292581 -87211972 + AluSx SINE Alu 1 310 -2 2466 84 0 7 chr17 2292929 2293237 -87211316 - AluSx SINE Alu -6 306 1 216 219 31 47 chr17 2293804 2293868 -87210685 - L2 LINE L2 -4 3268 3206 902 220 162 24 chr17 2294053 2294349 -87210204 - MER2 DNA MER2_type -8 337 1 728 147 7 29 chr17 2294636 2294772 -87209781 + FLAM_A SINE Alu 1 133 0 385 286 135 23 chr17 2296078 2296302 -87208251 + L1M4 LINE L1 2915 3113 -3033 2146 89 0 71 chr17 2296302 2296638 -87207915 + AluSx SINE Alu 1 312 0 2417 82 0 0 chr17 2296644 2296938 -87207615 + AluSg SINE Alu 1 294 -16 2767 22 0 16 chr17 2296947 2297263 -87207290 + AluY SINE Alu 1 311 0 385 286 135 23 chr17 2297263 2297312 -87207241 + L1M4 LINE L1 3124 5205 -941 595 165 0 10 chr17 2298296 2298399 -87206154 - FLAM_C SINE Alu -40 103 2 2258 85 10 7 chr17 2298435 2298730 -87205823 - AluSp SINE Alu -17 296 1 2273 49 3 21 chr17 2298755 2299079 -87205474 + AluY SINE Alu 2 320 0 2295 108 0 3 chr17 2299105 2299411 -87205142 + AluSc SINE Alu 1 305 -4 181 246 0 18 chr17 2299901 2299958 -87204595 + L3 LINE CR1 1145 1200 -377 1871 171 0 13 chr17 2300177 2300486 -87204067 - AluJb SINE Alu -7 305 1 523 287 14 0 chr17 2300507 2300650 -87203903 + Charlie8 DNA MER1_type 88 232 -2185 2208 92 3 22 chr17 2300656 2300972 -87203581 - AluSx SINE Alu -2 310 1 2097 102 10 14 chr17 2301084 2301379 -87203174 + AluSq SINE Alu 1 294 -19 21 43 0 0 chr17 2301886 2301909 -87202644 + AT_rich Low_complexity Low_complexity 1 23 0 2249 53 35 11 chr17 2302090 2302373 -87202180 - AluSx SINE Alu -22 290 1 229 230 23 69 chr17 2302726 2302813 -87201740 + MIR SINE MIR 47 129 -133 2422 83 0 13 chr17 2304280 2304593 -87199960 - AluSg SINE Alu -1 309 1 325 260 67 80 chr17 2304775 2304925 -87199628 + L1ME4a LINE L1 5962 6109 -12 2255 88 20 7 chr17 2305876 2306181 -87198372 - AluSx SINE Alu -3 309 1 425 254 135 44 chr17 2306418 2306670 -87197883 + L1ME4a LINE L1 5845 6119 -2 243 0 0 0 chr17 2307020 2307047 -87197506 + (CA)n Simple_repeat Simple_repeat 2 28 0 1998 120 3 20 chr17 2307132 2307431 -87197122 + AluSq SINE Alu 1 294 -19 186 133 0 0 chr17 2309508 2309538 -87195015 + (A)n Simple_repeat Simple_repeat 1 30 0 1417 210 0 30 chr17 2309942 2310247 -87194306 + AluJo SINE Alu 17 312 0 2145 98 0 77 chr17 2310897 2311224 -87193329 + AluSq SINE Alu 2 303 -10 2004 85 48 7 chr17 2311248 2311542 -87193011 - AluSc SINE Alu 0 305 1 1477 112 12 89 chr17 2311574 2311912 -87192641 + AluSx SINE Alu 1 312 0 378 0 0 0 chr17 2312163 2312205 -87192348 + (TG)n Simple_repeat Simple_repeat 2 43 0 2611 0 0 14 chr17 2312991 2313320 -87191233 - AluYa5 SINE Alu 0 325 1 401 204 0 11 chr17 2313367 2313455 -87191098 - AluJ/FLAM SINE Alu -210 92 6 2338 94 0 3 chr17 2313576 2313873 -87190680 + AluY SINE Alu 1 296 -15 189 0 0 0 chr17 2314521 2314542 -87190011 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1515 151 0 4 chr17 2314593 2314818 -87189735 - AluJb SINE Alu -5 307 84 622 216 0 24 chr17 2315148 2315273 -87189280 - FLAM_A SINE Alu -11 122 1 2329 102 0 10 chr17 2315366 2315679 -87188874 + AluSg SINE Alu 1 310 0 310 271 90 48 chr17 2315681 2315773 -87188780 + L1MC4a LINE L1 5882 5986 -1822 1847 142 0 41 chr17 2315773 2316089 -87188464 + AluSx SINE Alu 1 303 -9 310 271 90 48 chr17 2316089 2316162 -87188391 + L1MC4a LINE L1 5986 6054 -1754 813 150 0 16 chr17 2316539 2316666 -87187887 - FLAM_A SINE Alu -10 132 8 1003 143 0 26 chr17 2316764 2316918 -87187635 + AluJb SINE Alu 2 151 -161 282 206 0 0 chr17 2316951 2317014 -87187539 + GA-rich Low_complexity Low_complexity 5 67 0 832 270 64 22 chr17 2317054 2317365 -87187188 + L1MC4 LINE L1 6701 7024 -1018 899 80 0 16 chr17 2317365 2317490 -87187063 + Alu SINE Alu 189 311 0 351 0 0 0 chr17 2317497 2317536 -87187017 + (TA)n Simple_repeat Simple_repeat 2 40 0 867 101 0 43 chr17 2317548 2317686 -87186867 + FLAM_C SINE Alu 2 133 0 1251 168 17 138 chr17 2317737 2317779 -87186774 + L1MC5 LINE L1 6972 7017 -944 2409 91 3 3 chr17 2317779 2318087 -87186466 - AluSp SINE Alu -1 312 5 1251 168 17 138 chr17 2318087 2318135 -87186418 + L1MC5 LINE L1 7017 7069 -892 2206 97 35 0 chr17 2318135 2318424 -87186129 - AluSx SINE Alu -13 299 1 1251 168 17 138 chr17 2318424 2318744 -87185809 + L1MC5 LINE L1 7069 7333 -628 2231 75 0 24 chr17 2318749 2319044 -87185509 - AluSx SINE Alu -14 298 11 1233 153 16 0 chr17 2319058 2319241 -87185312 - AluJo SINE Alu -17 295 110 2552 38 0 19 chr17 2319349 2319662 -87184891 - AluY SINE Alu -4 307 1 22 56 0 0 chr17 2319665 2319701 -87184852 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr17 2319873 2319894 -87184659 + AT_rich Low_complexity Low_complexity 1 21 0 2099 130 0 10 chr17 2319894 2320194 -87184359 - AluSq SINE Alu -16 297 1 1276 210 122 50 chr17 2320195 2320672 -87183881 - L1ME3A LINE L1 -289 5881 5371 23 0 0 0 chr17 2320674 2320697 -87183856 + AT_rich Low_complexity Low_complexity 1 23 0 2164 100 0 32 chr17 2320898 2321207 -87183346 - AluY SINE Alu -12 299 1 1743 165 7 23 chr17 2321244 2321547 -87183006 + AluJb SINE Alu 1 298 -14 527 104 104 0 chr17 2321548 2321644 -87182909 - MER85 DNA T2_type -33 106 1 624 159 102 68 chr17 2321746 2321922 -87182631 - MIR SINE MIR 0 262 81 1914 109 6 61 chr17 2323180 2323492 -87181061 - AluSx SINE Alu -17 295 1 1915 131 0 45 chr17 2325877 2326189 -87178364 - AluJb SINE Alu -12 300 3 2213 126 7 0 chr17 2326551 2326860 -87177693 - AluSx SINE Alu -1 311 1 2269 84 30 7 chr17 2327512 2327809 -87176744 - AluSx SINE Alu -8 304 1 1700 166 0 27 chr17 2328135 2328431 -87176122 - AluJo SINE Alu -24 288 1 193 352 46 0 chr17 2328522 2328630 -87175923 + MIR3 SINE MIR 44 156 -52 31 0 0 0 chr17 2328646 2328677 -87175876 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr17 2328794 2328823 -87175730 + AT_rich Low_complexity Low_complexity 1 29 0 838 150 8 8 chr17 2328927 2329054 -87175499 + AluJo/FLAM SINE Alu 1 127 -185 1254 202 4 50 chr17 2329054 2329277 -87175276 + AluJo SINE Alu 57 268 -44 2459 65 0 3 chr17 2329277 2329570 -87174983 - AluSc SINE Alu -17 292 1 1254 202 4 50 chr17 2329570 2329604 -87174949 + AluJo SINE Alu 268 302 -10 251 176 0 27 chr17 2329610 2329684 -87174869 + L1PB4 LINE L1 4974 5045 -1101 1985 153 7 7 chr17 2329716 2330057 -87174496 + AluJo SINE Alu 5 345 0 1652 196 56 39 chr17 2330068 2330482 -87174071 + L1PB4 LINE L1 5733 6153 -3 180 0 0 0 chr17 2330791 2330811 -87173742 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 672 337 42 12 chr17 2331167 2331502 -87173051 + L1ME1 LINE L1 19 363 -6033 626 219 85 83 chr17 2331494 2331869 -87172684 + L1ME1 LINE L1 3155 3530 -2685 * 1039 161 12 0 chr17 2331869 2332031 -87172522 - AluSg/x SINE Alu -15 295 132 1929 106 66 15 chr17 2332031 2332304 -87172249 - AluSg SINE Alu -17 293 7 732 197 31 44 chr17 2332370 2332523 -87172030 + L1ME1 LINE L1 3588 3739 -2476 2225 89 0 48 chr17 2332523 2332839 -87171714 - AluY SINE Alu -10 301 1 732 197 31 44 chr17 2332839 2332913 -87171640 + L1ME1 LINE L1 3739 3812 -2403 970 150 79 22 chr17 2332914 2333141 -87171412 + L1MA7 LINE L1 5988 6227 -64 1746 153 32 29 chr17 2333141 2333226 -87171327 + MER7C DNA MER2_type 1 84 -2944 1791 119 60 11 chr17 2333226 2333533 -87171020 + AluSx SINE Alu 1 320 0 1746 153 32 29 chr17 2333533 2333759 -87170794 + MER7C DNA MER2_type 84 314 -288 2071 111 0 20 chr17 2333759 2334065 -87170488 - AluSx SINE Alu -12 300 1 617 194 15 30 chr17 2334067 2334201 -87170352 - AluJo/FLAM SINE Alu -170 132 1 1146 150 120 45 chr17 2334203 2334470 -87170083 + MER7C DNA MER2_type 316 602 0 333 108 15 0 chr17 2334470 2334535 -87170018 + L1MA7 LINE L1 6226 6291 0 2170 125 0 3 chr17 2334561 2334850 -87169703 + AluSx SINE Alu 7 294 -18 30 0 0 0 chr17 2334850 2334880 -87169673 + AT_rich Low_complexity Low_complexity 1 30 0 2027 190 21 104 chr17 2334899 2335552 -87169001 + L1ME1 LINE L1 3799 4397 -1818 645 144 0 0 chr17 2335557 2335647 -87168906 + AluSc SINE Alu 2 91 -218 297 0 0 0 chr17 2335647 2335680 -87168873 + (TCTCCC)n Simple_repeat Simple_repeat 5 37 0 4554 87 60 59 chr17 2335686 2336502 -87168051 + SVA Other Other 50 866 -520 1199 82 27 50 chr17 2336531 2336957 -87167596 + SVA Other Other 635 866 -555 5776 52 10 24 chr17 2337028 2337900 -87166653 + SVA Other Other 592 1452 0 1756 73 0 0 chr17 2337900 2338120 -87166433 + AluSc SINE Alu 80 299 -10 1089 193 162 9 chr17 2338132 2338453 -87166100 + L1ME1 LINE L1 4387 4756 -1459 812 164 0 0 chr17 2338454 2338582 -87165971 - FLAM_C SINE Alu -15 128 1 603 217 80 6 chr17 2338602 2338777 -87165776 + L1ME1 LINE L1 4750 4937 -1278 2294 225 130 15 chr17 2338793 2339623 -87164930 + L1ME1 LINE L1 5238 6195 -40 1937 120 7 13 chr17 2340423 2340732 -87163821 + AluSx SINE Alu 4 310 -2 1925 133 31 0 chr17 2340948 2341241 -87163312 + AluJb SINE Alu 1 302 -10 1746 214 107 137 chr17 2341720 2341934 -87162619 - L1MC4 LINE L1 -3 8039 7820 1951 118 3 19 chr17 2341934 2342247 -87162306 - AluSx SINE Alu 0 312 5 1746 214 107 137 chr17 2342247 2343342 -87161211 - L1MC4 LINE L1 -222 7820 6698 1996 119 3 10 chr17 2343665 2343968 -87160585 - AluSx SINE Alu -11 301 1 1115 121 0 6 chr17 2344023 2344189 -87160364 - AluSg/x SINE Alu -10 300 136 2211 90 7 3 chr17 2344193 2344493 -87160060 - AluSx SINE Alu -11 301 1 1667 164 0 17 chr17 2344805 2345095 -87159458 + AluJb SINE Alu 1 287 -25 194 0 0 37 chr17 2345095 2345122 -87159431 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1533 159 29 14 chr17 2345603 2345880 -87158673 - AluJo SINE Alu -29 283 3 830 180 56 11 chr17 2345897 2346075 -87158478 - AluSg/x SINE Alu -6 304 119 2349 54 0 22 chr17 2346167 2346480 -87158073 + AluY SINE Alu 1 306 -5 2153 93 0 17 chr17 2346542 2346843 -87157710 + AluSx SINE Alu 1 296 -16 263 186 129 0 chr17 2346890 2346960 -87157593 - MIR SINE MIR -59 203 125 1689 188 0 0 chr17 2347011 2347298 -87157255 - AluJb SINE Alu -25 287 1 24 0 0 0 chr17 2347520 2347544 -87157009 + AT_rich Low_complexity Low_complexity 1 24 0 1472 173 0 14 chr17 2347553 2347831 -87156722 + AluSx SINE Alu 5 278 -34 243 61 0 0 chr17 2347831 2347864 -87156689 + (CA)n Simple_repeat Simple_repeat 2 34 0 2060 127 3 0 chr17 2347929 2348228 -87156325 - AluJb SINE Alu -10 302 3 235 234 206 28 chr17 2348391 2348498 -87156055 + MIR SINE MIR 17 142 -66 2060 97 3 7 chr17 2348847 2349137 -87155416 + AluSp SINE Alu 1 289 -24 2283 89 0 3 chr17 2349734 2350037 -87154516 + AluSp SINE Alu 1 302 -11 1607 143 0 44 chr17 2350203 2350528 -87154025 + AluSx SINE Alu 1 312 0 2200 93 0 7 chr17 2350711 2351013 -87153540 - AluSx SINE Alu -12 300 1 2559 169 61 21 chr17 2351106 2351591 -87152962 + L1MB2 LINE L1 5621 6130 -41 2137 130 128 16 chr17 2351591 2351975 -87152578 + MSTA LTR MaLR 2 428 0 2559 169 61 21 chr17 2351975 2352011 -87152542 + L1MB2 LINE L1 6130 6163 -8 1925 131 0 19 chr17 2352592 2352906 -87151647 - AluSg SINE Alu -2 308 1 1743 110 27 40 chr17 2352991 2353291 -87151262 + AluSq SINE Alu 1 296 -17 1858 157 23 17 chr17 2353888 2354413 -87150140 + L1M4 LINE L1 4958 5486 -692 2230 83 0 16 chr17 2354416 2354728 -87149825 + AluY SINE Alu 1 307 -4 1500 144 0 32 chr17 2354750 2355028 -87149525 + AluSx SINE Alu 11 279 -33 2190 106 0 7 chr17 2355076 2355379 -87149174 + AluSx SINE Alu 1 301 -11 384 310 76 25 chr17 2355532 2355729 -87148824 + MLT1K LTR MaLR 348 554 -34 864 186 69 0 chr17 2355741 2355929 -87148624 + MER2 DNA MER2_type 9 209 -136 1600 150 36 39 chr17 2355958 2356265 -87148288 - AluJb SINE Alu 0 312 7 286 122 37 183 chr17 2356269 2356351 -87148202 + MER2 DNA MER2_type 273 342 -3 534 223 9 18 chr17 2356402 2356514 -87148039 + FLAM_A SINE Alu 5 115 -27 26 50 0 0 chr17 2356514 2356554 -87147999 + AT_rich Low_complexity Low_complexity 1 40 0 2157 101 0 7 chr17 2356595 2356892 -87147661 - AluSg SINE Alu -15 295 1 1699 172 89 3 chr17 2357106 2357420 -87147133 + MER7A DNA MER2_type 8 346 0 436 215 0 0 chr17 2357420 2357499 -87147054 + MLT1F LTR MaLR 17 95 -472 * 1138 245 50 7 chr17 2357490 2357765 -87146788 + MLT1F LTR MaLR 212 501 -41 1482 200 3 27 chr17 2357765 2358065 -87146488 + AluJo SINE Alu 1 293 -19 2061 122 0 10 chr17 2358120 2358431 -87146122 + AluSx SINE Alu 2 309 -3 237 245 0 0 chr17 2358435 2358488 -87146065 + MLT1F LTR MaLR 490 542 0 603 300 74 65 chr17 2358712 2358986 -87145567 - L1ME4a LINE L1 -95 6026 5756 2338 53 0 30 chr17 2358986 2359290 -87145263 - AluY SINE Alu -16 295 1 1824 125 20 16 chr17 2359290 2359461 -87145092 - AluSx SINE Alu -7 305 130 210 37 0 0 chr17 2359461 2359488 -87145065 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1824 125 20 16 chr17 2359488 2359619 -87144934 - AluSx SINE Alu -182 130 1 603 300 74 65 chr17 2359619 2359913 -87144640 - L1ME4a LINE L1 -364 5757 5452 381 72 0 119 chr17 2360214 2360306 -87144247 - Alu SINE Alu -240 61 1 756 179 0 21 chr17 2360324 2360469 -87144084 - FLAM_C SINE Alu 0 143 2 1248 182 104 7 chr17 2360644 2360780 -87143773 + AluSx SINE Alu 1 122 -190 2232 99 7 0 chr17 2360780 2361083 -87143470 + AluSq SINE Alu 1 305 -8 1248 182 104 7 chr17 2361083 2361215 -87143338 + AluSx SINE Alu 122 295 -17 295 139 0 0 chr17 2361404 2361447 -87143106 + Alu SINE Alu 249 291 -11 204 292 0 0 chr17 2361499 2361547 -87143006 + L2 LINE L2 3223 3270 -2 1873 156 20 0 chr17 2361576 2361877 -87142676 + AluSx SINE Alu 1 307 -5 2223 103 0 0 chr17 2361877 2362188 -87142365 + AluSx SINE Alu 1 311 -1 773 191 157 55 chr17 2362198 2362434 -87142119 - MLT1A1 LTR MaLR -19 346 87 1876 128 14 3 chr17 2362614 2362902 -87141651 - AluSx SINE Alu -21 291 1 2960 213 8 34 chr17 2362992 2363608 -87140945 + MER82 DNA MER2_type 2 601 -52 1535 167 47 7 chr17 2363608 2363884 -87140669 + AluJb SINE Alu 1 287 -25 1025 142 0 11 chr17 2364074 2364250 -87140303 + AluSg/x SINE Alu 139 312 0 485 260 115 35 chr17 2364266 2364466 -87140087 + MIR SINE MIR 20 235 -27 1100 237 67 6 chr17 2364577 2364919 -87139634 + L1MC/D LINE L1 4902 5264 -882 847 138 0 36 chr17 2364919 2365057 -87139496 + AluSq/x SINE Alu 1 133 -180 721 198 35 108 chr17 2365063 2365217 -87139336 + L1MC/D LINE L1 5319 5448 -911 1860 73 84 15 chr17 2365217 2365491 -87139062 + AluY SINE Alu 1 293 -18 721 198 35 108 chr17 2365491 2365594 -87138959 + L1MC/D LINE L1 5448 5557 -802 288 107 321 0 chr17 2365700 2365756 -87138797 + Tigger1 DNA MER2_type 159 232 -2186 795 167 30 0 chr17 2365790 2365922 -87138631 + FRAM SINE Alu 27 162 -14 1590 95 5 5 chr17 2365922 2366144 -87138409 + AluSc SINE Alu 1 222 -87 1479 118 54 71 chr17 2366146 2366272 -87138281 + Tigger1 DNA MER2_type 1454 1581 -837 1386 175 74 7 chr17 2366272 2366557 -87137996 + AluJb SINE Alu 1 304 -8 1479 118 54 71 chr17 2366557 2366619 -87137934 + Tigger1 DNA MER2_type 1581 1643 -775 2234 99 0 0 chr17 2366619 2366922 -87137631 + AluSg SINE Alu 1 303 -7 1479 118 54 71 chr17 2366922 2367028 -87137525 + Tigger1 DNA MER2_type 1643 1744 -674 2048 115 6 13 chr17 2367031 2367318 -87137235 + AluSx SINE Alu 1 287 -25 183 80 0 0 chr17 2367318 2367343 -87137210 + (CA)n Simple_repeat Simple_repeat 2 26 0 2048 115 6 13 chr17 2367343 2367368 -87137185 + AluSx SINE Alu 287 311 -1 1119 97 0 0 chr17 2367601 2367756 -87136797 + AluSg/x SINE Alu 150 304 -8 1433 124 0 10 chr17 2367908 2368109 -87136444 - MER1B DNA MER1_type 0 339 141 2150 92 10 3 chr17 2368553 2368859 -87135694 - AluY SINE Alu -3 308 1 513 103 23 11 chr17 2368875 2368962 -87135591 - AluY SINE Alu -180 131 44 1166 138 0 6 chr17 2369219 2369400 -87135153 + AluSg/x SINE Alu 128 307 -5 21 0 0 0 chr17 2369465 2369486 -87135067 + AT_rich Low_complexity Low_complexity 1 21 0 197 269 128 26 chr17 2370124 2370202 -87134351 + MIR SINE MIR 106 191 -71 366 249 45 104 chr17 2371236 2371311 -87133242 + MER5A DNA MER1_type 1 79 -110 2205 113 0 0 chr17 2371311 2371613 -87132940 + AluSp SINE Alu 1 302 -11 2207 96 7 0 chr17 2371623 2371925 -87132628 + AluSg SINE Alu 1 304 -6 366 249 45 104 chr17 2371925 2372039 -87132514 + MER5A DNA MER1_type 88 189 0 338 319 46 0 chr17 2372181 2372310 -87132243 + L1MC/D LINE L1 5684 5818 -352 1823 118 0 58 chr17 2372322 2372635 -87131918 + AluJb SINE Alu 3 297 -15 1635 86 52 0 chr17 2372639 2372872 -87131681 + AluY SINE Alu 1 245 -66 1370 105 0 10 chr17 2372972 2373172 -87131381 + AluSc SINE Alu 102 299 -10 2074 90 4 4 chr17 2373179 2373456 -87131097 + AluSc SINE Alu 1 277 -32 260 83 21 0 chr17 2373459 2373507 -87131046 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1688 129 0 0 chr17 2373941 2374181 -87130372 + AluSx SINE Alu 52 291 -21 702 208 120 5 chr17 2374192 2374384 -87130169 + L1ME1 LINE L1 5742 5955 -211 1787 177 0 0 chr17 2374384 2374678 -87129875 + AluJb SINE Alu 1 294 -18 2249 65 24 0 chr17 2374821 2375111 -87129442 - AluY SINE Alu -14 297 1 2173 123 0 0 chr17 2375111 2375419 -87129134 - AluSx SINE Alu -4 308 1 1030 277 89 48 chr17 2375425 2375746 -87128807 - HAL1 LINE L1 0 2507 2201 2203 86 3 10 chr17 2375746 2376049 -87128504 - AluSp SINE Alu -12 301 1 1030 277 89 48 chr17 2376049 2376409 -87128144 - HAL1 LINE L1 -306 2201 1798 365 245 126 7 chr17 2376449 2376592 -87127961 - L1ME4a LINE L1 -16 6105 5946 235 250 18 0 chr17 2376881 2376937 -87127616 + MER3 DNA MER1_type 34 90 -119 * 257 117 33 50 chr17 2376901 2376961 -87127592 - MER3 DNA MER1_type -7 202 144 2023 109 0 36 chr17 2376964 2377267 -87127286 - AluSq SINE Alu -21 292 1 1625 122 0 4 chr17 2377269 2377506 -87127047 - AluSx SINE Alu -23 289 54 984 118 24 18 chr17 2377619 2377789 -87126764 + L1MB4 LINE L1 6009 6179 -1 1568 159 0 53 chr17 2377924 2378256 -87126297 - AluJo SINE Alu 0 316 1 31 26 0 0 chr17 2378520 2378558 -87125995 + AT_rich Low_complexity Low_complexity 1 38 0 205 294 165 0 chr17 2378650 2378759 -87125794 + L2 LINE L2 2442 2568 -746 946 178 146 66 chr17 2378787 2379074 -87125479 - AluJo SINE Alu 0 312 3 327 310 103 54 chr17 2379076 2379337 -87125216 + L2 LINE L2 2616 2889 -425 920 68 0 0 chr17 2379358 2379476 -87125077 - AluSc SINE Alu -17 292 175 284 256 64 76 chr17 2379480 2379652 -87124901 + L2 LINE L2 2941 3110 -162 935 116 123 0 chr17 2379787 2379933 -87124620 - AluSq SINE Alu -149 164 1 501 273 56 0 chr17 2379948 2380109 -87124444 + L1ME LINE L1 5654 5823 -298 1636 71 0 0 chr17 2380110 2380320 -87124233 - AluY SINE Alu -7 304 95 1127 66 0 26 chr17 2380321 2380472 -87124081 - AluY SINE Alu -164 147 1 2221 87 3 7 chr17 2380472 2380772 -87123781 - AluSq SINE Alu -14 299 1 1217 128 0 0 chr17 2382178 2382358 -87122195 - AluSg/x SINE Alu 0 312 133 657 181 60 15 chr17 2382358 2382491 -87122062 + AluJo SINE Alu 14 152 -160 1951 101 3 18 chr17 2382693 2383006 -87121547 + AluSq SINE Alu 4 312 0 2219 96 0 3 chr17 2383862 2384163 -87120390 + AluSg SINE Alu 1 300 -10 405 80 0 0 chr17 2384529 2384579 -87119974 + Alu SINE Alu 1 50 -250 1235 52 0 0 chr17 2384579 2384732 -87119821 + AluY SINE Alu 152 304 -7 363 23 0 0 chr17 2384743 2384787 -87119766 + (CA)n Simple_repeat Simple_repeat 2 45 0 1866 156 0 7 chr17 2384971 2385279 -87119274 - AluJb SINE Alu -6 306 1 394 156 0 0 chr17 2385388 2385452 -87119101 - Alu SINE Alu -3 297 234 1411 116 4 42 chr17 2385553 2385794 -87118759 + AluSg/x SINE Alu 71 302 -8 2242 91 0 0 chr17 2386121 2386419 -87118134 - AluSx SINE Alu -13 299 2 952 152 0 43 chr17 2386439 2386623 -87117930 - AluSg/x SINE Alu 0 312 137 1712 163 27 3 chr17 2386630 2386930 -87117623 - AluJo SINE Alu -5 307 1 341 320 8 40 chr17 2387408 2387533 -87117020 + MIR3 SINE MIR 41 161 -47 232 219 0 0 chr17 2387535 2387576 -87116977 + AluJ/monomer SINE Alu 2 42 -260 2113 109 10 3 chr17 2387576 2387880 -87116673 + AluSx SINE Alu 1 306 -6 332 125 0 0 chr17 2388297 2388353 -87116200 - Alu SINE Alu 0 302 247 351 284 24 16 chr17 2388545 2388672 -87115881 - MLT1L LTR MaLR -2 613 486 314 54 0 0 chr17 2388876 2388913 -87115640 + U2 snRNA snRNA 1 37 -151 2015 97 18 0 chr17 2388992 2389116 -87115437 + AluY SINE Alu 1 121 -209 189 0 0 0 chr17 2389116 2389137 -87115416 + (CA)n Simple_repeat Simple_repeat 2 22 0 2015 97 18 0 chr17 2389137 2389337 -87115216 + AluY SINE Alu 121 330 0 1825 114 11 7 chr17 2389337 2389618 -87114935 + AluSq SINE Alu 1 282 -31 757 122 28 0 chr17 2389664 2389771 -87114782 - FLAM_C SINE Alu -32 111 2 710 249 152 91 chr17 2390014 2390496 -87114057 - MLT1H LTR MaLR 0 549 39 1135 147 0 0 chr17 2390512 2390689 -87113864 + AluSg/x SINE Alu 134 310 0 826 78 5 63 chr17 2391109 2391300 -87113253 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2065 125 3 0 chr17 2391300 2391635 -87112918 - AluSp SINE Alu 0 336 1 24 0 0 0 chr17 2391771 2391795 -87112758 + AT_rich Low_complexity Low_complexity 1 24 0 1964 129 3 10 chr17 2391865 2392160 -87112393 - AluSx SINE Alu -19 293 1 1747 141 7 11 chr17 2392249 2392561 -87111992 - AluSg SINE Alu 0 311 1 675 167 0 111 chr17 2392561 2392573 -87111980 - AluJo SINE Alu -167 145 133 1873 138 0 7 chr17 2392573 2392870 -87111683 - AluSq SINE Alu -18 295 1 675 167 0 111 chr17 2392870 2393019 -87111534 - AluJo SINE Alu -179 133 2 320 314 95 57 chr17 2393562 2393858 -87110695 + L2 LINE L2 2449 2755 -559 392 171 49 12 chr17 2393870 2393952 -87110601 - MIR SINE MIR -5 257 173 316 271 0 24 chr17 2393981 2394066 -87110487 - MIR SINE MIR -178 84 2 1091 314 31 110 chr17 2394295 2394467 -87110086 - AluJo SINE Alu -9 293 156 2245 94 0 3 chr17 2394467 2394765 -87109788 + AluSq SINE Alu 1 297 -16 1091 314 31 110 chr17 2394765 2394910 -87109643 - AluJo SINE Alu -146 156 1 1854 107 21 24 chr17 2395478 2395767 -87108786 + AluSx SINE Alu 2 289 -23 25 31 0 0 chr17 2395771 2395803 -87108750 + AT_rich Low_complexity Low_complexity 1 32 0 325 202 0 138 chr17 2395806 2395915 -87108638 + L1MC4 LINE L1 6615 6708 -1334 298 217 24 36 chr17 2395922 2396173 -87108380 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 2324 87 3 0 chr17 2397181 2397493 -87107060 - AluSp SINE Alu 0 313 1 304 219 144 53 chr17 2397920 2398107 -87106446 - L1MC5 LINE L1 -182 7779 7576 23 0 0 0 chr17 2398132 2398155 -87106398 + AT_rich Low_complexity Low_complexity 1 23 0 1362 97 10 0 chr17 2398246 2398441 -87106112 - AluSp SINE Alu 0 313 117 249 368 34 8 chr17 2398639 2398681 -87105872 - L2 LINE L2 -237 3035 2996 1844 113 17 14 chr17 2398681 2398972 -87105581 + AluSx SINE Alu 1 292 -20 249 368 34 8 chr17 2398972 2399046 -87105507 - L2 LINE L2 -276 2996 2916 391 179 13 13 chr17 2399940 2400018 -87104535 + MIR SINE MIR 184 261 -1 430 340 32 6 chr17 2400227 2400383 -87104170 - MIR SINE MIR -75 187 28 1884 126 41 0 chr17 2400513 2400806 -87103747 - AluSq SINE Alu -8 305 1 2289 83 0 16 chr17 2400963 2401276 -87103277 - AluY SINE Alu -3 308 1 1909 128 3 13 chr17 2401321 2401627 -87102926 - AluSc SINE Alu -6 303 1 2030 135 3 6 chr17 2401627 2401938 -87102615 - AluSx SINE Alu -2 310 1 24 0 0 0 chr17 2402313 2402337 -87102216 + AT_rich Low_complexity Low_complexity 1 24 0 1870 142 3 7 chr17 2402337 2402632 -87101921 - AluJb SINE Alu -18 294 1 1507 139 4 8 chr17 2402648 2402885 -87101668 - MER46A DNA MER2_type 0 236 1 205 190 52 0 chr17 2402892 2402950 -87101603 + (TA)n Simple_repeat Simple_repeat 2 62 0 808 153 79 95 chr17 2403215 2403283 -87101270 + MER5A DNA MER1_type 1 69 -120 2097 100 3 0 chr17 2403283 2403573 -87100980 + AluSg SINE Alu 1 291 -19 808 153 79 95 chr17 2403573 2403694 -87100859 + MER5A DNA MER1_type 69 187 -2 512 141 41 50 chr17 2403714 2403835 -87100718 - L1MC3 LINE L1 -1 7784 7665 298 287 10 30 chr17 2404013 2404114 -87100439 - MIR SINE MIR -66 196 98 1851 152 3 10 chr17 2404151 2404460 -87100093 - AluJo SINE Alu -5 307 1 2219 96 3 0 chr17 2404604 2404916 -87099637 + AluSp SINE Alu 1 313 0 444 299 62 17 chr17 2404945 2405122 -87099431 - MIR SINE MIR -77 185 1 1586 244 99 46 chr17 2405158 2405653 -87098900 + MLT2F LTR ERVL 45 565 -98 1031 141 0 70 chr17 2405653 2405725 -87098828 - Tigger6 DNA MER2_type -3 1594 1519 2060 112 37 0 chr17 2405725 2406020 -87098533 - AluSg SINE Alu -4 306 1 2035 94 33 0 chr17 2406020 2406319 -87098234 - AluY SINE Alu -2 309 1 1031 141 0 70 chr17 2406319 2406430 -87098123 - Tigger6 DNA MER2_type -76 1521 1423 794 96 35 9 chr17 2406452 2406567 -87097986 - AluJb SINE Alu -194 118 1 816 189 9 108 chr17 2406743 2406896 -87097657 - L1M3 LINE L1 -541 5639 5472 755 208 0 0 chr17 2406896 2407026 -87097527 - FLAM_C SINE Alu -2 131 2 2064 125 0 3 chr17 2407032 2407336 -87097217 - AluSq SINE Alu -10 303 1 1939 141 0 13 chr17 2407337 2407682 -87096871 - AluSx SINE Alu 0 312 8 816 189 9 108 chr17 2407682 2407731 -87096822 - L1M3 LINE L1 -712 5468 5449 1622 173 3 14 chr17 2407966 2408261 -87096292 + AluJo SINE Alu 3 294 -18 536 264 8 8 chr17 2408273 2408402 -87096151 - L2 LINE L2 -3 3310 3182 1407 246 28 39 chr17 2408471 2408833 -87095720 + MLT1J LTR MaLR 3 360 -151 1306 193 30 43 chr17 2408842 2409143 -87095410 + AluJo SINE Alu 12 308 -4 199 109 0 43 chr17 2409155 2409201 -87095352 + (GAA)n Simple_repeat Simple_repeat 2 45 0 719 105 0 0 chr17 2409243 2409338 -87095215 - 7SLRNA srpRNA srpRNA -11 309 215 2309 90 6 0 chr17 2409338 2409649 -87094904 - AluSp SINE Alu 0 313 1 1614 111 4 0 chr17 2409649 2409874 -87094679 - 7SLRNA srpRNA srpRNA -93 227 1 266 253 0 13 chr17 2409879 2409954 -87094599 + MLT1J LTR MaLR 412 485 -26 229 268 237 0 chr17 2410014 2410111 -87094442 - L2 LINE L2 -223 3049 2930 977 90 0 8 chr17 2410216 2410350 -87094203 - AluSq/x SINE Alu -180 133 1 1551 173 3 26 chr17 2411142 2411278 -87093275 + AluJo SINE Alu 1 139 -173 2110 109 3 0 chr17 2411278 2411572 -87092981 + AluSg SINE Alu 1 295 -15 2377 59 3 13 chr17 2411574 2411881 -87092672 + AluY SINE Alu 1 304 -7 1551 173 3 26 chr17 2411881 2412048 -87092505 + AluJo SINE Alu 140 300 -12 2213 84 3 3 chr17 2412090 2412387 -87092166 + AluSq SINE Alu 1 297 -16 1426 176 97 38 chr17 2412664 2413004 -87091549 + LTR2B LTR ERV1 32 391 -99 867 45 0 0 chr17 2413022 2413132 -87091421 - SVA Other Other -1 1385 1276 563 136 2 0 chr17 2413134 2413228 -87091325 + LTR2B LTR ERV1 355 490 0 1073 151 0 0 chr17 2413229 2413395 -87091158 - AluSg/x SINE Alu -13 297 132 1520 93 9 0 chr17 2413395 2413609 -87090944 - AluSq SINE Alu -11 302 87 1003 167 0 22 chr17 2413712 2413892 -87090661 + AluSg/x SINE Alu 119 294 -16 1767 168 3 0 chr17 2413953 2414251 -87090302 - AluJb SINE Alu -13 299 1 338 287 103 51 chr17 2414251 2414582 -87089971 + HAL1 LINE L1 25 372 -2135 1933 123 0 16 chr17 2414585 2414894 -87089659 + AluSc SINE Alu 1 304 -5 430 284 83 33 chr17 2414895 2415213 -87089340 + L1MC/D LINE L1 5386 5714 -448 2073 79 7 4 chr17 2415344 2415658 -87088895 + AluSx SINE Alu 1 315 0 233 151 0 38 chr17 2415742 2415770 -87088783 + A-rich Low_complexity Low_complexity 5 32 -23 2296 86 3 3 chr17 2415770 2416083 -87088470 + AluSq SINE Alu 1 313 0 233 151 0 38 chr17 2416083 2416107 -87088446 + A-rich Low_complexity Low_complexity 32 55 0 415 327 35 39 chr17 2416328 2416582 -87087971 + L1M4 LINE L1 4582 4834 -1312 2075 124 0 6 chr17 2416627 2416941 -87087612 + AluSx SINE Alu 1 312 0 1257 102 0 0 chr17 2416941 2417108 -87087445 + AluSq SINE Alu 133 299 -14 974 174 11 16 chr17 2417231 2417421 -87087132 + AluJo SINE Alu 92 280 -32 614 325 13 21 chr17 2417441 2417675 -87086878 + MIR SINE MIR 31 262 0 612 215 23 8 chr17 2417859 2417989 -87086564 - AluSg/x SINE Alu -17 295 164 1263 113 5 5 chr17 2417991 2418177 -87086376 - AluSg/x SINE Alu -8 302 117 2018 119 10 10 chr17 2418293 2418595 -87085958 - AluSx SINE Alu -10 302 1 912 133 20 137 chr17 2418655 2418910 -87085643 + AluJb SINE Alu 87 311 -1 395 129 48 0 chr17 2419230 2419292 -87085261 - AluS SINE Alu -12 288 224 681 158 0 0 chr17 2419292 2419393 -87085160 - AluS SINE Alu -212 101 1 8118 127 143 38 chr17 2419442 2420997 -87083556 - pTR5 LTR ERV1 0 2438 589 999 94 0 0 chr17 2421127 2421254 -87083299 - FLAM_C SINE Alu -6 127 1 272 274 0 0 chr17 2421346 2421408 -87083145 - MIR3 SINE MIR -33 175 114 395 218 118 9 chr17 2421414 2421524 -87083029 - L1M4 LINE L1 -2553 3593 3472 1195 131 4 79 chr17 2421668 2421897 -87082656 + AluSx SINE Alu 1 212 -100 1007 104 0 146 chr17 2421997 2422209 -87082344 + AluJb SINE Alu 125 305 -7 517 348 146 29 chr17 2422218 2422904 -87081649 - L2 LINE L2 -727 2587 1822 1640 152 14 18 chr17 2422904 2423219 -87081334 + AluJo SINE Alu 1 314 0 1529 177 29 35 chr17 2423276 2423457 -87081096 + L1MB2 LINE L1 5651 5832 -339 2167 81 0 37 chr17 2423457 2423780 -87080773 + AluSx SINE Alu 1 311 -1 1529 177 29 35 chr17 2423780 2424025 -87080528 + L1MB2 LINE L1 5832 6171 0 622 164 95 0 chr17 2424297 2424413 -87080140 - FLAM_C SINE Alu 0 143 17 1200 103 0 0 chr17 2424555 2424720 -87079833 + AluSq SINE Alu 1 165 -148 1413 77 31 15 chr17 2424736 2424932 -87079621 + AluSg/x SINE Alu 101 299 -13 377 260 46 51 chr17 2425042 2425238 -87079315 + L1MC4a LINE L1 5711 5905 -1903 2381 66 0 0 chr17 2426776 2427079 -87077474 + AluY SINE Alu 1 303 -8 22 0 0 0 chr17 2427083 2427105 -87077448 + AT_rich Low_complexity Low_complexity 1 22 0 2401 42 0 0 chr17 2427112 2427418 -87077135 + AluY SINE Alu 1 306 0 263 273 68 45 chr17 2427682 2427792 -87076761 - MIR SINE MIR -78 184 69 2145 94 0 25 chr17 2427792 2428110 -87076443 + AluSg SINE Alu 1 310 0 263 273 68 45 chr17 2428110 2428131 -87076422 - MIR SINE MIR -193 69 50 2322 72 7 0 chr17 2428403 2428707 -87075846 + AluY SINE Alu 1 306 -5 1898 155 0 0 chr17 2428727 2429023 -87075530 + AluSq SINE Alu 1 296 -17 5332 142 25 66 chr17 2429023 2430066 -87074487 + L1MC1 LINE L1 5324 6323 -10 512 133 0 0 chr17 2430077 2430160 -87074393 + L1M4b LINE L1 90 172 -6687 189 107 0 0 chr17 2430160 2430188 -87074365 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1076 141 0 6 chr17 2430648 2430818 -87073735 - AluJb SINE Alu -27 285 117 240 86 0 0 chr17 2431268 2431303 -87073250 + (A)n Simple_repeat Simple_repeat 1 35 0 1924 89 23 0 chr17 2431539 2431798 -87072755 + AluSq SINE Alu 1 265 -48 207 0 0 0 chr17 2431803 2431826 -87072727 + (TC)n Simple_repeat Simple_repeat 2 24 0 808 291 160 38 chr17 2432851 2433490 -87071063 - L2 LINE L2 -667 2647 1931 2192 107 0 0 chr17 2433569 2433867 -87070686 + AluSq SINE Alu 1 298 -15 815 112 72 0 chr17 2433956 2434081 -87070472 + AluJo SINE Alu 2 135 -177 21 0 0 0 chr17 2434081 2434102 -87070451 + AT_rich Low_complexity Low_complexity 1 21 0 1194 166 67 9 chr17 2434239 2434462 -87070091 - MER46A DNA MER2_type 0 236 1 543 319 87 0 chr17 2435007 2435222 -87069331 + MIR SINE MIR 24 262 0 2454 188 75 30 chr17 2435371 2435945 -87068608 - L1MB7 LINE L1 0 6184 5585 1282 189 23 36 chr17 2436040 2436366 -87068187 - AluJb SINE Alu 0 312 1 445 269 65 9 chr17 2436689 2436797 -87067756 + MIR SINE MIR 34 147 -61 2254 103 3 0 chr17 2436800 2437111 -87067442 + AluSx SINE Alu 1 312 0 1865 214 156 63 chr17 2437367 2437816 -87066737 + L1MC4 LINE L1 6725 7255 -787 1673 171 0 28 chr17 2437816 2438137 -87066416 + AluSx SINE Alu 1 312 0 1865 214 156 63 chr17 2438137 2438342 -87066211 + L1MC4 LINE L1 7255 7440 -602 437 187 122 0 chr17 2438391 2438498 -87066055 + L1MB7 LINE L1 6049 6168 -16 1036 277 125 49 chr17 2438531 2439079 -87065474 + HAL1b LINE L1 94 714 -634 886 163 141 0 chr17 2439079 2439263 -87065290 - MER6B DNA MER2_type 0 210 1 1036 277 125 49 chr17 2439263 2439450 -87065103 + HAL1b LINE L1 714 885 -463 1647 141 21 34 chr17 2439520 2439811 -87064742 + AluJo SINE Alu 1 287 -25 21 0 0 0 chr17 2439811 2439832 -87064721 + AT_rich Low_complexity Low_complexity 1 21 0 368 252 121 89 chr17 2439833 2440174 -87064379 + L1M4 LINE L1 2137 3422 -2724 234 257 68 14 chr17 2441268 2441342 -87063211 - MER5C DNA MER1_type -245 79 2 2013 125 3 0 chr17 2441391 2441687 -87062866 - AluSq SINE Alu -14 299 3 277 303 8 53 chr17 2441696 2441828 -87062725 - Charlie8 DNA MER1_type -2203 214 89 3070 140 39 14 chr17 2441881 2442395 -87062158 + MER1A DNA MER1_type 1 527 0 790 303 69 69 chr17 2442563 2443072 -87061481 - L2 LINE L2 -1 3312 2804 336 205 24 36 chr17 2443083 2443166 -87061387 + MER94 DNA DNA 1 82 -52 1133 114 0 0 chr17 2443172 2443330 -87061223 - AluSg/x SINE Alu -17 293 136 378 183 16 0 chr17 2443435 2443520 -87061033 - L1P3 LINE L1 -402 5752 5664 442 188 20 2 chr17 2443536 2443787 -87060766 + AluJo SINE Alu 1 295 -17 636 250 152 62 chr17 2444034 2444190 -87060363 + Charlie8 DNA MER1_type 63 204 -2213 691 179 0 15 chr17 2444190 2444324 -87060229 - FLAM_C SINE Alu 0 133 2 636 250 152 62 chr17 2444324 2444535 -87060018 + Charlie8 DNA MER1_type 204 463 -1954 2312 55 3 0 chr17 2444535 2444825 -87059728 - AluSg SINE Alu -19 291 1 1743 161 3 0 chr17 2444854 2445139 -87059414 - AluSx SINE Alu -26 286 1 1243 88 83 6 chr17 2445545 2445726 -87058827 + MER30 DNA MER1_type 1 195 -35 2274 99 0 16 chr17 2446203 2446516 -87058037 + AluSg SINE Alu 1 308 -2 2077 94 17 14 chr17 2447226 2447523 -87057030 - AluSx SINE Alu -14 298 1 193 263 0 0 chr17 2447525 2447563 -87056990 - MIR SINE MIR -78 184 147 318 219 113 86 chr17 2447598 2447636 -87056917 + MER58B DNA MER1_type 4 40 -301 1495 159 21 10 chr17 2447636 2447925 -87056628 - AluJb SINE Alu -20 292 1 318 219 113 86 chr17 2447925 2448037 -87056516 + MER58B DNA MER1_type 40 158 -183 28 29 0 0 chr17 2448041 2448076 -87056477 + AT_rich Low_complexity Low_complexity 1 35 0 298 85 85 0 chr17 2448078 2448125 -87056428 + MER58B DNA MER1_type 150 200 -141 180 0 0 0 chr17 2448165 2448185 -87056368 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 21 36 0 0 chr17 2449006 2449034 -87055519 + AT_rich Low_complexity Low_complexity 1 28 0 1620 143 24 14 chr17 2449037 2449324 -87055229 - AluJo SINE Alu -9 303 14 525 173 136 0 chr17 2449345 2449455 -87055098 + MER58B DNA MER1_type 217 341 0 1222 192 4 54 chr17 2449621 2449881 -87054672 - AluJo SINE Alu -43 269 23 1739 115 64 3 chr17 2450006 2450302 -87054251 - MER2 DNA MER2_type 0 345 32 2155 103 0 0 chr17 2450454 2450754 -87053799 - AluSg SINE Alu -10 300 1 2166 154 26 48 chr17 2451320 2451735 -87052818 - MLT2D LTR ERVL -8 406 1 2305 53 0 33 chr17 2451797 2452097 -87052456 + AluY SINE Alu 1 290 -21 1830 120 0 37 chr17 2452651 2452950 -87051603 + AluSx SINE Alu 1 288 -24 2078 97 0 7 chr17 2452982 2453271 -87051282 + AluSg SINE Alu 1 287 -23 608 205 6 58 chr17 2453617 2453773 -87050780 - AluJo SINE Alu -63 249 102 871 145 47 47 chr17 2453773 2453945 -87050608 - AluJb SINE Alu -140 172 1 1020 222 4 50 chr17 2454204 2454465 -87050088 - AluJo SINE Alu -21 291 43 2105 103 0 7 chr17 2454998 2455288 -87049265 + AluSc SINE Alu 1 288 -21 1498 131 20 3 chr17 2455548 2455802 -87048751 - L1PA13 LINE L1 -14 6149 5845 1209 137 15 5 chr17 2456030 2456234 -87048319 - AluJb SINE Alu 0 312 107 1695 92 9 0 chr17 2456237 2456466 -87048087 - THE1A LTR MaLR 0 355 125 2192 108 3 11 chr17 2456466 2456817 -87047736 + L1PBa LINE L1 2413 2760 -4103 560 178 0 0 chr17 2456919 2457020 -87047533 + AluSg/x SINE Alu 204 304 -8 2262 85 3 13 chr17 2457286 2457593 -87046960 + AluSx SINE Alu 1 304 -8 1593 169 3 3 chr17 2458335 2458625 -87045928 - AluJb SINE Alu -22 290 1 1314 189 13 60 chr17 2458627 2458786 -87045767 - AluJo SINE Alu -14 288 148 1987 125 7 7 chr17 2458786 2459091 -87045462 - AluSx SINE Alu -7 305 1 1314 189 13 60 chr17 2459091 2459232 -87045321 - AluJo SINE Alu -154 148 2 544 126 0 172 chr17 2459244 2459395 -87045158 - FLAM_C SINE Alu -7 126 2 374 247 96 48 chr17 2459483 2459649 -87044904 - MIR SINE MIR -48 214 41 2355 70 0 6 chr17 2459878 2460191 -87044362 + AluY SINE Alu 1 311 0 1394 57 0 0 chr17 2460191 2460367 -87044186 + AluSg/x SINE Alu 132 307 -2 23 33 0 0 chr17 2461029 2461059 -87043494 + GC_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr17 2461120 2461148 -87043405 + (CGG)n Simple_repeat Simple_repeat 2 29 0 285 102 51 0 chr17 2461417 2461476 -87043077 + CT-rich Low_complexity Low_complexity 1 62 0 237 200 31 15 chr17 2461635 2461700 -87042853 + CT-rich Low_complexity Low_complexity 2 67 0 2518 170 62 18 chr17 2463651 2464127 -87040426 + L1MB2 LINE L1 5628 6130 -41 2226 131 129 8 chr17 2464127 2464508 -87040045 + MSTA LTR MaLR 2 428 0 2518 170 62 18 chr17 2464508 2464544 -87040009 + L1MB2 LINE L1 6130 6163 -8 277 192 0 0 chr17 2465134 2465186 -87039367 - Alu SINE Alu -2 300 249 480 316 163 37 chr17 2465188 2465678 -87038875 + L2 LINE L2 2736 3270 -2 710 203 16 0 chr17 2465733 2465861 -87038692 - FLAM_A SINE Alu 0 133 4 22 0 0 0 chr17 2466050 2466072 -87038481 + AT_rich Low_complexity Low_complexity 1 22 0 1626 155 4 4 chr17 2466154 2466418 -87038135 - AluSx SINE Alu -14 298 35 2240 92 0 16 chr17 2466665 2466980 -87037573 - AluSx SINE Alu -2 310 1 2088 114 19 0 chr17 2467234 2467541 -87037012 + AluSq SINE Alu 1 313 0 1267 216 36 16 chr17 2467551 2467856 -87036697 + AluJo SINE Alu 1 311 -1 2262 95 0 0 chr17 2467976 2468272 -87036281 + AluSg SINE Alu 1 296 -14 486 307 7 7 chr17 2468396 2468533 -87036020 - MIR3 SINE MIR -25 183 47 1997 86 3 58 chr17 2468787 2469100 -87035453 + AluSq SINE Alu 1 296 -17 2297 163 38 57 chr17 2469179 2469702 -87034851 + L1MB4 LINE L1 5343 5855 -325 334 251 110 64 chr17 2469710 2469929 -87034624 + L1MB7 LINE L1 5642 5870 -314 * 353 231 132 52 chr17 2469917 2470144 -87034409 + L1MB7 LINE L1 5658 5867 -317 225 143 54 18 chr17 2470148 2470204 -87034349 + L1M4 LINE L1 5745 5802 -382 5414 72 24 15 chr17 2470317 2471114 -87033439 + SVA Other Other 65 868 -518 6453 65 13 41 chr17 2471158 2472134 -87032419 + SVA Other Other 433 1381 -5 781 311 138 26 chr17 2472297 2472956 -87031597 + L2 LINE L2 2243 2975 -339 1374 126 36 138 chr17 2473435 2473603 -87030950 + AluJo SINE Alu 3 122 -180 1914 103 3 72 chr17 2473603 2473923 -87030630 + AluSx SINE Alu 1 298 -14 1374 126 36 138 chr17 2473923 2474088 -87030465 + AluJo SINE Alu 122 302 0 966 151 37 55 chr17 2474143 2474361 -87030192 - L1MA4A LINE L1 -4 6299 6086 1000 199 23 14 chr17 2474657 2474873 -87029680 - AluJo SINE Alu -8 304 87 570 253 112 0 chr17 2474876 2475054 -87029499 + L2 LINE L2 3111 3308 -5 2457 54 0 0 chr17 2476312 2476610 -87027943 + AluSx SINE Alu 1 298 -14 694 240 147 62 chr17 2476765 2477002 -87027551 - MLT1H LTR MaLR -16 533 318 2029 88 13 42 chr17 2477002 2477309 -87027244 - AluSq SINE Alu -15 298 1 694 240 147 62 chr17 2477309 2477501 -87027052 - MLT1H LTR MaLR -231 318 30 623 284 72 32 chr17 2477722 2477960 -87026593 + MIR SINE MIR 18 261 -1 26 0 0 0 chr17 2478018 2478044 -87026509 + AT_rich Low_complexity Low_complexity 1 26 0 2026 97 0 7 chr17 2478182 2478489 -87026064 + AluSx SINE Alu 22 312 0 1982 126 10 3 chr17 2479167 2479468 -87025085 + AluSq SINE Alu 4 306 -7 584 174 0 37 chr17 2479561 2479670 -87024883 - AluJb SINE Alu -6 306 202 * 686 126 0 0 chr17 2479669 2479772 -87024781 + AluSg/x SINE Alu 196 298 -11 891 164 0 31 chr17 2480165 2480324 -87024229 + AluJo SINE Alu 1 154 -158 423 133 0 0 chr17 2480330 2480390 -87024163 + AluJb SINE Alu 95 154 -158 1436 142 0 0 chr17 2480396 2480608 -87023945 + AluJb SINE Alu 95 306 -6 209 179 0 90 chr17 2480923 2480990 -87023563 + A-rich Low_complexity Low_complexity 1 61 0 301 211 146 89 chr17 2481187 2481310 -87023243 - MLT1I LTR MaLR -232 177 48 524 115 35 35 chr17 2481418 2481505 -87023048 + L1M3 LINE L1 5583 5669 -514 1009 122 6 6 chr17 2481509 2481665 -87022888 - AluSq SINE Alu -157 156 1 1511 90 10 0 chr17 2482108 2482309 -87022244 - THE1A LTR MaLR -152 203 1 11444 91 10 24 chr17 2482309 2483394 -87021159 - THE1A-int LTR MaLR 0 1580 481 2113 103 37 0 chr17 2483394 2483694 -87020859 - AluY SINE Alu 0 311 1 11444 91 10 24 chr17 2483694 2483767 -87020786 - THE1A-int LTR MaLR -1099 481 408 1849 108 3 42 chr17 2483767 2484074 -87020479 - AluSx SINE Alu -15 297 3 11444 91 10 24 chr17 2484074 2484517 -87020036 - THE1A-int LTR MaLR -1172 408 1 2505 114 14 0 chr17 2484517 2484867 -87019686 - THE1A LTR MaLR 0 355 1 666 185 0 0 chr17 2484870 2484978 -87019575 - FLAM_C SINE Alu -34 109 2 23 54 0 0 chr17 2485138 2485175 -87019378 + AT_rich Low_complexity Low_complexity 1 37 0 1771 140 3 57 chr17 2485780 2486095 -87018458 + AluJo SINE Alu 1 298 -14 2247 101 7 10 chr17 2486105 2486402 -87018151 + AluSx SINE Alu 1 296 -16 2078 100 0 4 chr17 2486706 2486985 -87017568 - AluSg SINE Alu -30 280 3 15429 206 17 13 chr17 2486987 2490990 -87013563 - L1PA12 LINE L1 -752 6832 2822 253 283 65 0 chr17 2490998 2491090 -87013463 + L1ME LINE L1 5727 5824 -297 2301 106 3 6 chr17 2491094 2491406 -87013147 + AluSx SINE Alu 1 311 -1 1033 292 148 7 chr17 2491409 2491998 -87012555 - L1PA12 LINE L1 -6186 1399 728 447 223 133 30 chr17 2492037 2492203 -87012350 - L1MC5 LINE L1 -37 7924 7742 829 175 0 0 chr17 2492220 2492363 -87012190 - FLAM_C SINE Alu 0 143 1 988 208 83 39 chr17 2492363 2492700 -87011853 - L1MC5 LINE L1 -232 7729 7378 1734 167 63 0 chr17 2492701 2493018 -87011535 - MER2 DNA MER2_type 0 345 9 490 134 107 9 chr17 2493027 2493139 -87011414 - L1MC5 LINE L1 -583 7378 7256 2123 127 13 0 chr17 2493295 2493602 -87010951 - AluSq SINE Alu -2 311 1 445 347 115 0 chr17 2493721 2494009 -87010544 + L2 LINE L2 1780 2100 -1214 189 0 0 0 chr17 2494096 2494117 -87010436 + (T)n Simple_repeat Simple_repeat 1 21 0 226 337 111 46 chr17 2494165 2494268 -87010285 + L2 LINE L2 2313 2408 -906 2232 99 3 7 chr17 2494268 2494570 -87009983 - AluSx SINE Alu -11 301 1 226 337 111 46 chr17 2494570 2494772 -87009781 + L2 LINE L2 2408 2638 -676 217 329 21 100 chr17 2494973 2495015 -87009538 + L2 LINE L2 3144 3188 -84 2149 106 17 0 chr17 2495015 2495308 -87009245 + AluSq SINE Alu 1 298 -15 217 329 21 100 chr17 2495308 2495405 -87009148 + L2 LINE L2 3188 3272 0 1799 137 13 27 chr17 2495489 2495789 -87008764 - AluJo SINE Alu -6 306 11 1314 173 57 83 chr17 2495952 2496252 -87008301 + AluJb SINE Alu 1 292 -20 650 154 27 9 chr17 2496584 2496694 -87007859 - AluSx SINE Alu -10 300 189 961 145 0 0 chr17 2496694 2496832 -87007721 - AluSx SINE Alu -174 138 1 1398 194 44 34 chr17 2496865 2497158 -87007395 - AluJo SINE Alu -16 296 1 284 253 0 67 chr17 2497177 2497252 -87007301 + L2 LINE L2 3185 3254 -18 1336 181 58 11 chr17 2497465 2497725 -87006828 + AluJo SINE Alu 28 299 -13 2211 106 0 7 chr17 2498639 2498940 -87005613 - AluSq SINE Alu -14 299 1 2412 74 3 0 chr17 2499033 2499330 -87005223 - AluY SINE Alu -13 298 1 2134 96 0 4 chr17 2499733 2500013 -87004540 - AluSg SINE Alu -16 294 16 22 35 0 0 chr17 2500020 2500049 -87004504 + AT_rich Low_complexity Low_complexity 1 29 0 3383 255 72 50 chr17 2500054 2500584 -87003969 - L1MD3 LINE L1 0 8042 7525 1909 124 0 4 chr17 2500584 2500850 -87003703 - AluSg SINE Alu -13 297 33 3383 255 72 50 chr17 2500850 2501267 -87003286 - L1MD3 LINE L1 -517 7525 7119 2293 96 0 34 chr17 2501267 2501590 -87002963 - AluSx SINE Alu 0 312 1 3383 255 72 50 chr17 2501590 2502009 -87002544 - L1MD3 LINE L1 -923 7119 6659 641 187 193 0 chr17 2502014 2502164 -87002389 - MER20 DNA MER1_type -5 214 36 581 297 112 29 chr17 2502206 2502372 -87002181 - L1MC4a LINE L1 -1208 6600 6449 1647 154 37 85 chr17 2502372 2502749 -87001804 + MER46B DNA MER2_type 2 235 -1 581 297 112 29 chr17 2502749 2503210 -87001343 - L1MC4a LINE L1 -1359 6449 5901 1654 127 0 95 chr17 2503212 2503550 -87001003 - AluJo SINE Alu -6 306 1 770 169 73 15 chr17 2503550 2503686 -87000867 - AluJo SINE Alu -167 145 2 2016 125 3 23 chr17 2503686 2503991 -87000562 - AluSx SINE Alu -13 299 1 1225 171 76 36 chr17 2504034 2504285 -87000268 - AluJo SINE Alu -46 266 6 520 245 12 105 chr17 2504301 2504391 -87000162 - L1MC4a LINE L1 -1926 5882 5785 2192 121 0 3 chr17 2504391 2504698 -86999855 + AluSq SINE Alu 1 306 -7 520 245 12 105 chr17 2504698 2504864 -86999689 - L1MC4a LINE L1 -2023 5785 5650 1826 169 10 0 chr17 2505096 2505392 -86999161 + AluJb SINE Alu 1 299 -13 2094 100 18 0 chr17 2505447 2505728 -86998825 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 2505728 2505756 -86998797 + (TA)n Simple_repeat Simple_repeat 2 29 0 2106 90 32 0 chr17 2505756 2506035 -86998518 - AluY SINE Alu -23 288 1 377 307 135 63 chr17 2506043 2506551 -86998002 + L1M4 LINE L1 2870 3340 -2806 1741 115 28 4 chr17 2506551 2506803 -86997750 + AluSx SINE Alu 51 308 -4 377 307 135 63 chr17 2506803 2507081 -86997472 + L1M4 LINE L1 3340 3596 -2550 1635 163 56 24 chr17 2507081 2507199 -86997354 + AluSg SINE Alu 1 114 -196 2035 107 6 50 chr17 2507199 2507516 -86997037 + AluSx SINE Alu 1 303 -9 1635 163 56 24 chr17 2507516 2507685 -86996868 + AluSg SINE Alu 114 297 -13 377 307 135 63 chr17 2507685 2507783 -86996770 + L1M4 LINE L1 3596 3685 -2461 2453 102 26 50 chr17 2507783 2507854 -86996699 - THE1C LTR MaLR 0 375 304 2224 82 7 0 chr17 2507854 2508161 -86996392 + AluY SINE Alu 1 309 0 2453 102 26 50 chr17 2508161 2508472 -86996081 - THE1C LTR MaLR -71 304 1 377 307 135 63 chr17 2508472 2508526 -86996027 + L1M4 LINE L1 3685 3734 -2412 2059 137 0 3 chr17 2508526 2508825 -86995728 + AluSx SINE Alu 1 298 -14 377 307 135 63 chr17 2508825 2509142 -86995411 + L1M4 LINE L1 3734 4219 -1927 910 138 13 38 chr17 2509205 2509364 -86995189 + AluSg/x SINE Alu 144 298 -12 2053 123 7 10 chr17 2509422 2509724 -86994829 + AluSx SINE Alu 1 301 -11 271 262 60 27 chr17 2509751 2509900 -86994653 + L1M4 LINE L1 4505 4658 -1488 24 0 0 0 chr17 2509903 2509927 -86994626 + AT_rich Low_complexity Low_complexity 1 24 0 232 189 19 0 chr17 2510159 2510212 -86994341 + L1M4 LINE L1 5115 5168 -978 991 165 215 58 chr17 2510234 2510361 -86994192 + AluJb SINE Alu 1 107 -195 2262 111 0 0 chr17 2510361 2510658 -86993895 + AluSx SINE Alu 1 297 -15 991 165 215 58 chr17 2510658 2510791 -86993762 + AluJb SINE Alu 107 302 0 1999 132 0 26 chr17 2511426 2511736 -86992817 + AluSx SINE Alu 1 302 -10 1915 168 93 26 chr17 2511875 2512261 -86992292 - L1MC2 LINE L1 -71 6273 5855 2484 51 3 16 chr17 2512261 2512572 -86991981 + AluY SINE Alu 1 307 -4 1915 168 93 26 chr17 2512572 2512603 -86991950 - L1MC2 LINE L1 -489 5855 5828 5885 46 3 5 chr17 2512888 2513562 -86990991 + L1PA5 LINE L1 5481 6153 -1 2149 107 3 28 chr17 2513919 2514238 -86990315 - AluY SINE Alu 0 311 1 1868 130 60 0 chr17 2514322 2514606 -86989947 - AluSq SINE Alu -12 301 1 1825 174 0 0 chr17 2514775 2515073 -86989480 - AluJb SINE Alu -14 298 1 760 165 126 77 chr17 2515073 2515255 -86989298 - AluJo SINE Alu -3 309 119 297 0 0 0 chr17 2515315 2515348 -86989205 + (TG)n Simple_repeat Simple_repeat 2 34 0 1408 171 121 11 chr17 2515523 2515787 -86988766 + AluSg SINE Alu 1 293 -17 517 200 0 0 chr17 2515810 2515905 -86988648 + U13 snRNA snRNA 1 95 -9 2267 95 3 10 chr17 2516049 2516355 -86988198 - AluSg SINE Alu -6 304 1 1175 168 25 15 chr17 2516383 2516580 -86987973 + AluJo SINE Alu 83 281 -31 861 96 0 0 chr17 2517061 2517176 -86987377 - AluY SINE Alu -20 291 177 2036 127 3 7 chr17 2517376 2517675 -86986878 - AluSx SINE Alu -14 298 1 1976 133 28 0 chr17 2519103 2519388 -86985165 + AluSx SINE Alu 1 293 -19 2082 102 56 0 chr17 2519388 2519673 -86984880 + AluSc SINE Alu 1 301 -8 1953 126 14 20 chr17 2519682 2519975 -86984578 + AluSx SINE Alu 1 291 -21 6482 90 60 6 chr17 2520362 2521776 -86982777 - L1PA8 LINE L1 0 6172 4675 1552 103 210 4 chr17 2521945 2522197 -86982356 + AluY SINE Alu 1 304 -7 2071 121 0 37 chr17 2522469 2522510 -86982043 - AluSx SINE Alu -2 310 269 414 0 0 0 chr17 2522510 2522556 -86981997 + (TG)n Simple_repeat Simple_repeat 1 46 0 2071 121 0 37 chr17 2522556 2522836 -86981717 - AluSx SINE Alu -43 269 1 2212 106 3 10 chr17 2522960 2523261 -86981292 + AluSp SINE Alu 1 299 -14 1019 109 0 0 chr17 2523262 2523400 -86981153 + AluY SINE Alu 135 272 -39 824 211 0 0 chr17 2523507 2523673 -86980880 - AluJb SINE Alu 0 312 147 2193 110 10 0 chr17 2523833 2524124 -86980429 - AluSg SINE Alu -16 294 1 668 88 0 0 chr17 2524125 2524205 -86980348 - AluSg1 SINE Alu -223 86 7 1103 141 0 0 chr17 2524375 2524538 -86980015 - AluSp SINE Alu -14 299 137 1817 93 4 0 chr17 2524539 2524775 -86979778 - AluSg SINE Alu -14 296 60 312 27 0 0 chr17 2524797 2524834 -86979719 + (TC)n Simple_repeat Simple_repeat 1 37 0 313 208 0 0 chr17 2524842 2524895 -86979658 + Tigger4(Zombi) DNA MER2_type 2679 2731 0 2395 91 7 7 chr17 2525722 2526031 -86978522 - AluSx SINE Alu -3 309 1 381 231 20 121 chr17 2526541 2526740 -86977813 + MIR SINE MIR 84 262 0 974 67 0 0 chr17 2527357 2527476 -86977077 + AluY SINE Alu 174 292 -19 2054 99 14 3 chr17 2528174 2528458 -86976095 + AluSx SINE Alu 1 287 -25 1864 147 31 0 chr17 2528536 2528822 -86975731 + AluJo SINE Alu 1 295 -17 2267 58 0 7 chr17 2528825 2529100 -86975453 + AluY SINE Alu 1 273 -38 258 286 64 64 chr17 2529205 2529376 -86975177 + L1ME LINE L1 5552 5722 -399 2110 92 27 7 chr17 2529397 2529690 -86974863 - AluSq SINE Alu -14 299 1 248 217 0 36 chr17 2529878 2529961 -86974592 + CT-rich Low_complexity Low_complexity 4 83 0 495 276 173 5 chr17 2530949 2531134 -86973419 + MIR SINE MIR 31 246 -16 2240 83 13 17 chr17 2531323 2531623 -86972930 - AluSg SINE Alu 0 310 12 2221 128 0 0 chr17 2531728 2532034 -86972519 - AluSx SINE Alu -6 306 1 1768 165 0 49 chr17 2532117 2532444 -86972109 + AluJo SINE Alu 1 311 -1 2283 102 7 0 chr17 2532919 2533214 -86971339 + AluSq SINE Alu 1 297 -16 2676 27 0 0 chr17 2533489 2533788 -86970765 + AluY SINE Alu 1 299 -12 22 0 0 0 chr17 2534808 2534830 -86969723 + AT_rich Low_complexity Low_complexity 1 22 0 681 208 0 17 chr17 2534994 2535114 -86969439 + FLAM_A SINE Alu 5 122 -11 1973 136 10 7 chr17 2535139 2535434 -86969119 - AluSx SINE Alu -16 296 1 827 83 101 0 chr17 2535656 2535765 -86968788 + AluJo SINE Alu 6 125 -187 1112 152 0 17 chr17 2535806 2535984 -86968569 + AluJo SINE Alu 120 294 -18 2172 106 0 28 chr17 2536223 2536543 -86968010 + AluSx SINE Alu 1 311 -1 2307 54 34 3 chr17 2537012 2537306 -86967247 + AluY SINE Alu 1 303 -8 2330 71 0 0 chr17 2537704 2538023 -86966530 + AluY SINE Alu 1 311 0 2142 118 0 31 chr17 2538106 2538251 -86966302 + AluSx SINE Alu 1 149 -163 2231 90 10 3 chr17 2538251 2538551 -86966002 + AluSp SINE Alu 1 302 -11 2142 118 0 31 chr17 2538551 2538727 -86965826 + AluSx SINE Alu 149 312 0 1624 163 41 34 chr17 2538737 2539031 -86965522 + AluJo SINE Alu 1 296 -16 696 251 6 0 chr17 2539042 2539213 -86965340 + MER3 DNA MER1_type 38 209 0 1146 112 0 0 chr17 2539457 2539803 -86964750 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 519 288 123 27 chr17 2539812 2540219 -86964334 - L1MC4 LINE L1 -48 7994 7549 252 299 126 0 chr17 2540960 2541047 -86963506 + MIR SINE MIR 153 250 -12 2078 131 3 0 chr17 2541087 2541384 -86963169 + 7SLRNA srpRNA srpRNA 18 315 -5 1102 133 20 64 chr17 2541617 2541820 -86962733 - AluJb SINE Alu -32 280 87 186 43 0 0 chr17 2543692 2543715 -86960838 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr17 2545754 2545783 -86958770 + (T)n Simple_repeat Simple_repeat 1 29 0 926 98 0 8 chr17 2546132 2546265 -86958288 + FLAM_C SINE Alu 2 133 0 1916 143 10 10 chr17 2546580 2546888 -86957665 + AluSq SINE Alu 1 308 -5 346 266 148 30 chr17 2547215 2547384 -86957169 + MER5A DNA MER1_type 1 189 0 2245 103 0 0 chr17 2547483 2547784 -86956769 - AluSg SINE Alu -9 301 1 2017 104 0 11 chr17 2548106 2548385 -86956168 - AluSq SINE Alu -37 276 1 2009 101 3 0 chr17 2551413 2551700 -86952853 + AluSg SINE Alu 1 288 -22 304 30 60 30 chr17 2552062 2552129 -86952424 + (CCCCCG)n Simple_repeat Simple_repeat 5 73 0 1633 130 0 0 chr17 2553298 2553551 -86951002 + AluSx SINE Alu 54 306 0 183 209 47 0 chr17 2556120 2556163 -86948390 + MIR SINE MIR 103 147 -115 2327 74 7 3 chr17 2557249 2557548 -86947005 + AluSp SINE Alu 1 300 -13 185 171 29 0 chr17 2558841 2558876 -86945677 + MIR SINE MIR 112 147 -61 2076 123 0 10 chr17 2558893 2559202 -86945351 + AluSx SINE Alu 1 306 -6 1789 147 0 14 chr17 2559466 2559759 -86944794 - AluJb SINE Alu -23 289 1 2246 104 0 0 chr17 2559763 2560061 -86944492 - AluSg SINE Alu -12 298 1 2328 88 0 3 chr17 2562949 2563257 -86941296 - AluSq SINE Alu -6 307 1 344 312 33 45 chr17 2564075 2564251 -86940302 - MIR3 SINE MIR 0 208 35 245 260 146 32 chr17 2564317 2564440 -86940113 + MIR SINE MIR 47 184 -24 187 291 157 22 chr17 2566435 2566569 -86937984 - MIR3 SINE MIR -34 174 23 236 219 31 31 chr17 2568620 2568684 -86935869 - MIR SINE MIR -118 144 81 306 186 4 35 chr17 2570255 2570339 -86934214 + MIR SINE MIR 49 126 -82 214 158 42 63 chr17 2571633 2571728 -86932825 + (CCCG)n Simple_repeat Simple_repeat 4 96 0 225 226 312 0 chr17 2572485 2572571 -86931982 - MIR SINE MIR -49 159 49 1631 106 21 100 chr17 2572975 2573304 -86931249 + AluJo SINE Alu 1 303 -9 2338 67 7 0 chr17 2573304 2573601 -86930952 + AluSq SINE Alu 1 300 -13 358 246 40 43 chr17 2573632 2573799 -86930754 + L1MC4 LINE L1 1959 6985 -1337 260 254 103 11 chr17 2573823 2574004 -86930549 - L1MC4a LINE L1 -507 5826 5729 2016 135 26 0 chr17 2574178 2574481 -86930072 + AluJb SINE Alu 1 311 -1 2087 103 3 0 chr17 2574605 2574895 -86929658 - AluSx SINE Alu -21 291 1 484 286 0 0 chr17 2574972 2575098 -86929455 + MER94 DNA DNA 1 126 -8 2299 93 3 0 chr17 2575135 2575437 -86929116 - AluSg SINE Alu -7 303 1 195 411 56 0 chr17 2575440 2575530 -86929023 + L2 LINE L2 3155 3249 -23 960 195 0 0 chr17 2575535 2575704 -86928849 - FRAM SINE Alu -4 172 4 1723 75 6 177 chr17 2575830 2576197 -86928356 - AluSp SINE Alu 0 308 1 2152 110 7 0 chr17 2576482 2576790 -86927763 + AluSx SINE Alu 1 310 -2 335 194 10 126 chr17 2577245 2577313 -86927240 + MIR3 SINE MIR 112 186 -22 1784 124 10 59 chr17 2577313 2577619 -86926934 + AluSx SINE Alu 1 291 -21 2328 71 7 0 chr17 2577620 2577915 -86926638 + AluY SINE Alu 1 297 -14 335 194 10 126 chr17 2577915 2577947 -86926606 + MIR3 SINE MIR 185 202 -6 2120 136 0 0 chr17 2578042 2578350 -86926203 - AluSx SINE Alu -4 308 1 241 195 0 0 chr17 2578619 2578660 -86925893 + Alu SINE Alu 240 280 -22 636 171 0 18 chr17 2578714 2578825 -86925728 + FLAM_A SINE Alu 20 128 -14 2035 122 30 0 chr17 2578826 2579130 -86925423 + AluSp SINE Alu 1 313 0 516 210 129 47 chr17 2579155 2579267 -86925286 - MLT1K LTR MaLR -66 522 421 2191 107 0 7 chr17 2579267 2579575 -86924978 - AluSg SINE Alu -4 306 1 516 210 129 47 chr17 2579575 2579695 -86924858 - MLT1K LTR MaLR -167 421 271 288 299 13 0 chr17 2579753 2579830 -86924723 - MLT1K LTR MaLR -318 270 193 2204 97 7 3 chr17 2580465 2580763 -86923790 - AluSx SINE Alu -13 299 1 2489 53 0 3 chr17 2583318 2583622 -86920931 - AluSq SINE Alu -10 303 1 27 116 0 0 chr17 2584709 2584855 -86919698 + GC_rich Low_complexity Low_complexity 1 146 0 2173 93 0 31 chr17 2585222 2585543 -86919010 + AluSx SINE Alu 1 311 -1 551 320 82 42 chr17 2585709 2586087 -86918466 - L2 LINE L2 -1 3271 2879 2147 84 3 72 chr17 2586118 2586314 -86918239 - AluSx SINE Alu -3 309 144 2360 60 0 17 chr17 2586314 2586613 -86917940 - AluY SINE Alu -17 294 1 2147 84 3 72 chr17 2586613 2586748 -86917805 - AluSx SINE Alu -168 144 1 2048 108 10 14 chr17 2586748 2587044 -86917509 - AluSg SINE Alu -15 295 1 1433 168 119 0 chr17 2587045 2587313 -86917240 - AluJo SINE Alu -12 300 1 591 328 6 0 chr17 2587363 2587540 -86917013 + MER5B DNA MER1_type 1 178 0 2354 90 0 6 chr17 2587675 2587987 -86916566 + AluSg SINE Alu 1 310 0 800 145 0 36 chr17 2588017 2588155 -86916398 + FRAM SINE Alu 28 160 -16 1397 174 68 14 chr17 2588176 2588457 -86916096 + AluJb SINE Alu 1 296 -16 2430 49 13 0 chr17 2588457 2588763 -86915790 + AluY SINE Alu 1 310 -1 24 0 0 0 chr17 2589159 2589183 -86915370 + AT_rich Low_complexity Low_complexity 1 24 0 804 169 0 0 chr17 2589184 2589302 -86915251 - FLAM_C SINE Alu -24 119 2 2185 88 0 13 chr17 2589340 2589646 -86914907 + AluSx SINE Alu 1 302 -10 725 196 55 0 chr17 2589767 2589930 -86914623 - L1MB2 LINE L1 -5 6166 5995 259 283 0 0 chr17 2590274 2590334 -86914219 + MER91A DNA MER1_type 4 63 -133 210 200 71 94 chr17 2590368 2590453 -86914100 + MER91A DNA MER1_type 18 100 -96 378 0 0 0 chr17 2590653 2590695 -86913858 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr17 2590694 2590718 -86913835 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 526 207 18 0 chr17 2592099 2592210 -86912343 + MIR SINE MIR 80 192 -70 2118 118 0 0 chr17 2592566 2592863 -86911690 + AluSx SINE Alu 1 297 -15 2441 47 0 10 chr17 2592863 2593209 -86911344 + AluY SINE Alu 1 311 0 2522 58 3 0 chr17 2593380 2593690 -86910863 - AluSp SINE Alu -2 311 1 2424 76 0 6 chr17 2593876 2594191 -86910362 - AluSp SINE Alu 0 313 1 215 299 29 135 chr17 2594266 2594540 -86910013 + L2 LINE L2 2919 3163 -109 2179 99 3 0 chr17 2594626 2594919 -86909634 - AluY SINE Alu -17 294 1 185 211 0 0 chr17 2595495 2595533 -86909020 - MIR SINE MIR -61 147 110 2166 115 0 0 chr17 2595564 2595860 -86908693 - AluSx SINE Alu -14 298 3 530 236 38 25 chr17 2595925 2596082 -86908471 + MIR3 SINE MIR 35 193 -15 2043 108 3 0 chr17 2596279 2596566 -86907987 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr17 2596566 2596590 -86907963 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 804 165 0 0 chr17 2596597 2596718 -86907835 + FLAM_C SINE Alu 2 122 -21 1928 122 10 10 chr17 2596730 2597087 -86907466 + AluSx SINE Alu 1 312 0 2450 48 10 16 chr17 2597594 2597907 -86906646 - AluY SINE Alu 0 311 1 575 207 38 44 chr17 2598180 2598204 -86906349 + MIR SINE MIR 32 55 -207 1510 158 15 8 chr17 2598204 2598469 -86906084 - AluJo SINE Alu -45 267 1 575 207 38 44 chr17 2598469 2598619 -86905934 + MIR SINE MIR 55 208 -54 2282 41 48 3 chr17 2598622 2598915 -86905638 + AluY SINE Alu 1 306 -5 2132 112 0 0 chr17 2598920 2599215 -86905338 + AluSx SINE Alu 1 295 -17 2307 87 0 3 chr17 2599217 2599527 -86905026 + AluSc SINE Alu 1 309 0 2236 74 3 7 chr17 2599530 2599818 -86904735 + AluY SINE Alu 1 289 -22 299 25 25 0 chr17 2599818 2599858 -86904695 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 522 256 107 66 chr17 2599982 2600271 -86904282 - L2 LINE L2 -2 3311 3011 1216 164 100 9 chr17 2600278 2600509 -86904044 + MLT1E1 LTR MaLR 1 252 -402 2210 112 0 3 chr17 2600511 2600824 -86903729 + AluSx SINE Alu 1 312 0 1439 142 9 0 chr17 2600900 2601126 -86903427 + AluJb SINE Alu 84 311 -1 564 170 10 0 chr17 2601127 2601227 -86903326 + MLT1E LTR MaLR 493 593 0 251 211 111 11 chr17 2601227 2601317 -86903236 - L2 LINE L2 -258 3014 2916 265 281 0 0 chr17 2601330 2601394 -86903159 - MIR SINE MIR 0 262 199 * 285 350 54 39 chr17 2601392 2601526 -86903027 - L2 LINE L2 -400 2914 2775 2014 110 0 32 chr17 2601526 2601723 -86902830 + AluSx SINE Alu 1 186 -126 2371 73 0 0 chr17 2601723 2602023 -86902530 - AluY SINE Alu -11 300 1 2014 110 0 32 chr17 2602023 2602135 -86902418 + AluSx SINE Alu 186 300 -12 285 350 54 39 chr17 2602135 2602203 -86902350 - L2 LINE L2 -539 2775 2709 1190 153 14 5 chr17 2602206 2602415 -86902138 - AluJo SINE Alu -15 297 87 643 304 57 18 chr17 2602420 2602700 -86901853 - L2 LINE L2 -604 2710 2420 2113 256 88 41 chr17 2602746 2603279 -86901274 + L2 LINE L2 2153 2660 -653 2222 92 0 3 chr17 2603279 2603582 -86900971 + AluSx SINE Alu 1 302 -10 2113 256 88 41 chr17 2603582 2603994 -86900559 + L2 LINE L2 2660 3051 -262 2207 101 0 10 chr17 2603994 2604301 -86900252 - AluSg SINE Alu 0 310 7 2113 256 88 41 chr17 2604301 2604318 -86900235 + L2 LINE L2 3051 3066 -247 1006 161 105 115 chr17 2604318 2604623 -86899930 - AluJo SINE Alu 0 302 1 2113 256 88 41 chr17 2604623 2604770 -86899783 + L2 LINE L2 3066 3312 -1 260 219 70 78 chr17 2604776 2604904 -86899649 - L2 LINE L2 -907 2407 2281 1854 133 16 35 chr17 2604912 2605228 -86899325 + AluJb SINE Alu 3 312 0 201 322 0 0 chr17 2605285 2605372 -86899181 + (TG)n Simple_repeat Simple_repeat 2 88 0 2241 119 0 0 chr17 2606101 2606413 -86898140 - AluSq SINE Alu -1 312 1 2177 85 3 3 chr17 2606810 2607103 -86897450 - AluSx SINE Alu -19 293 1 2068 122 0 0 chr17 2607576 2607870 -86896683 + AluSq SINE Alu 1 294 -19 505 275 64 0 chr17 2607988 2608159 -86896394 - MIR SINE MIR -3 259 78 247 280 63 63 chr17 2608404 2608579 -86895974 + L2 LINE L2 3005 3179 -134 330 67 0 0 chr17 2608633 2608678 -86895875 + (TG)n Simple_repeat Simple_repeat 1 45 0 331 308 0 0 chr17 2609796 2609916 -86894637 + G-rich Low_complexity Low_complexity 1 120 0 323 143 0 0 chr17 2610239 2610295 -86894258 + MIR SINE MIR 71 126 -82 2055 89 13 13 chr17 2610401 2610704 -86893849 + AluSx SINE Alu 1 303 -9 421 144 10 96 chr17 2610836 2610940 -86893613 + MIR SINE MIR 128 222 -40 1919 142 0 0 chr17 2611359 2611669 -86892884 + AluSg SINE Alu 1 310 0 481 284 49 22 chr17 2612035 2612218 -86892335 + MIR SINE MIR 35 222 -40 2080 110 0 0 chr17 2612298 2612615 -86891938 - AluSx SINE Alu 0 317 1 2040 139 0 3 chr17 2612616 2612918 -86891635 - AluSx SINE Alu -11 301 1 1008 188 0 0 chr17 2612942 2613107 -86891446 - AluJo/FRAM SINE Alu -1 301 137 1756 138 14 3 chr17 2613107 2613389 -86891164 - AluJb SINE Alu -5 307 23 463 246 154 11 chr17 2613520 2613695 -86890858 - MIR SINE MIR -49 213 14 264 184 0 20 chr17 2613907 2613956 -86890597 - LTR33 LTR ERVL 0 521 474 1666 104 0 0 chr17 2613962 2614183 -86890370 + AluSq SINE Alu 1 221 -92 1112 45 0 8 chr17 2614183 2614317 -86890236 - AluSc SINE Alu -176 133 1 728 108 0 0 chr17 2614318 2614420 -86890133 - L1M3 LINE L1 -378 5793 5692 2214 52 0 25 chr17 2614426 2614735 -86889818 - AluY SINE Alu 0 308 7 206 32 32 0 chr17 2614773 2614804 -86889749 + (TA)n Simple_repeat Simple_repeat 2 33 0 951 177 6 6 chr17 2614806 2614964 -86889589 - FAM SINE Alu -17 158 1 2342 62 7 3 chr17 2615147 2615455 -86889098 - AluSg SINE Alu -1 309 1 29 78 0 0 chr17 2615714 2615778 -86888775 + GC_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr17 2615851 2615874 -86888679 + GC_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr17 2615905 2615927 -86888626 + GC_rich Low_complexity Low_complexity 1 22 0 361 254 82 22 chr17 2616915 2617049 -86887504 - MIR SINE MIR -90 172 31 2020 126 0 10 chr17 2617248 2617549 -86887004 - AluJb SINE Alu -10 302 5 398 319 28 7 chr17 2617620 2617761 -86886792 + MLT1K LTR MaLR 174 317 -271 2378 64 0 0 chr17 2618005 2618300 -86886253 - AluY SINE Alu -16 295 1 1986 127 3 0 chr17 2618313 2618604 -86885949 - AluSg SINE Alu -18 292 1 528 232 26 46 chr17 2618844 2618995 -86885558 - MLT1K LTR MaLR -3 585 438 1414 150 7 66 chr17 2618998 2619271 -86885282 - AluJo SINE Alu -55 257 1 600 329 35 41 chr17 2619277 2619410 -86885143 - L1MC/D LINE L1 -2030 5778 5646 1694 164 23 13 chr17 2619410 2619579 -86884974 - AluJb SINE Alu -10 302 127 2342 92 0 0 chr17 2619579 2619882 -86884671 - AluSq SINE Alu -10 303 1 1694 164 23 13 chr17 2619882 2620011 -86884542 - AluJb SINE Alu -185 127 1 600 329 35 41 chr17 2620011 2620221 -86884332 - L1MC/D LINE L1 -2162 5646 5437 1874 56 0 0 chr17 2620223 2620454 -86884099 + AluY SINE Alu 81 311 0 2263 90 0 0 chr17 2620482 2620772 -86883781 - AluSx SINE Alu -22 290 1 1427 162 15 19 chr17 2620803 2621074 -86883479 - L1MC3 LINE L1 -200 7585 7316 2143 128 0 0 chr17 2621074 2621386 -86883167 - AluSq SINE Alu -1 312 1 2278 96 3 6 chr17 2621405 2621719 -86882834 - AluSp SINE Alu 0 313 1 507 196 10 0 chr17 2621758 2621855 -86882698 + MER2 DNA MER2_type 1 98 -247 1408 167 0 50 chr17 2621926 2622109 -86882444 - L1M4 LINE L1 -635 5543 5377 2479 65 3 0 chr17 2622109 2622418 -86882135 - AluY SINE Alu -1 310 1 1408 167 0 50 chr17 2622418 2622516 -86882037 - L1M4 LINE L1 -801 5377 5276 2076 111 13 25 chr17 2622518 2622833 -86881720 - AluSx SINE Alu -1 311 1 312 179 0 0 chr17 2622834 2622890 -86881663 - MLT1A2 LTR MaLR -318 56 1 1237 173 5 0 chr17 2622905 2623107 -86881446 - AluJo SINE Alu -109 203 1 2133 125 0 0 chr17 2623545 2623857 -86880696 + AluSx SINE Alu 1 312 0 308 314 8 42 chr17 2624095 2624213 -86880340 + MIR3 SINE MIR 85 198 -10 2077 100 28 0 chr17 2624281 2624572 -86879981 + AluSx SINE Alu 1 299 -13 2346 97 0 0 chr17 2624572 2624882 -86879671 + AluSg SINE Alu 1 310 0 272 338 116 0 chr17 2625270 2625468 -86879085 + L2 LINE L2 2341 2561 -753 772 148 49 0 chr17 2625471 2625593 -86878960 + FLAM_A SINE Alu 1 128 -5 2282 64 0 14 chr17 2625593 2625888 -86878665 + AluY SINE Alu 5 295 -16 1428 107 0 10 chr17 2625895 2626120 -86878433 + AluSg/x SINE Alu 78 300 0 209 279 66 0 chr17 2626120 2626181 -86878372 + L2 LINE L2 2643 2707 -607 1458 171 67 56 chr17 2626367 2626490 -86878063 + MLT1A1 LTR MaLR 1 121 -244 1682 114 103 0 chr17 2626490 2626752 -86877801 + AluSg SINE Alu 3 291 -19 1458 171 67 56 chr17 2626752 2626985 -86877568 + MLT1A1 LTR MaLR 121 361 -4 184 292 0 0 chr17 2627000 2627048 -86877505 + L2 LINE L2 3000 3047 -225 2288 98 7 0 chr17 2627213 2627519 -86877034 + AluSg SINE Alu 1 308 -2 771 311 73 87 chr17 2627576 2627869 -86876684 - L1MC4a LINE L1 -1742 6066 5783 2129 92 14 7 chr17 2627869 2628163 -86876390 - AluY SINE Alu -15 296 1 771 311 73 87 chr17 2628163 2628431 -86876122 - L1MC4a LINE L1 -2025 5783 5513 195 262 0 0 chr17 2628481 2628523 -86876030 + L2 LINE L2 3168 3209 -63 2231 102 0 0 chr17 2628541 2628844 -86875709 + AluSq SINE Alu 1 303 -10 1831 167 0 16 chr17 2629076 2629393 -86875160 + AluJo SINE Alu 1 312 0 2412 35 0 0 chr17 2629407 2629754 -86874799 + AluY SINE Alu 3 349 0 334 223 16 144 chr17 2629825 2629923 -86874630 - L3 LINE CR1 -111 1466 1402 2272 106 0 0 chr17 2629923 2630234 -86874319 + AluSx SINE Alu 2 312 0 334 223 16 144 chr17 2630234 2630323 -86874230 - L3 LINE CR1 -175 1402 1303 2104 120 0 19 chr17 2630890 2631248 -86873305 + AluSx SINE Alu 1 352 0 2241 100 13 0 chr17 2631612 2631921 -86872632 - AluSq SINE Alu 0 313 1 539 169 0 0 chr17 2632035 2632118 -86872435 - FLAM_A SINE Alu -16 126 44 1946 114 11 4 chr17 2632125 2632405 -86872148 - AluSq SINE Alu -17 296 15 1506 173 23 36 chr17 2632419 2632726 -86871827 - AluJo SINE Alu -9 303 1 640 209 162 16 chr17 2632733 2632924 -86871629 - MIR SINE MIR -13 249 31 1981 99 75 3 chr17 2632977 2633269 -86871284 - AluSq SINE Alu 0 313 1 455 395 30 31 chr17 2633271 2633808 -86870745 + L3 LINE CR1 186 805 -772 186 43 0 0 chr17 2633808 2633831 -86870722 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 455 395 30 31 chr17 2633831 2633842 -86870711 + L3 LINE CR1 805 815 -762 2222 80 7 0 chr17 2633857 2634189 -86870364 - AluSq SINE Alu 0 334 1 258 313 132 35 chr17 2634196 2634423 -86870130 + L3 LINE CR1 796 1044 -533 1947 103 41 3 chr17 2634612 2634902 -86869651 - AluSx SINE Alu -11 301 1 2067 121 0 35 chr17 2634948 2635263 -86869290 - AluSx SINE Alu -8 304 1 448 290 55 84 chr17 2635342 2635721 -86868832 - L2 LINE L2 -80 3233 2866 413 333 82 0 chr17 2635756 2635951 -86868602 + L3 LINE CR1 1343 1553 -24 2255 73 0 0 chr17 2636028 2636316 -86868237 + AluSx SINE Alu 1 288 -24 204 217 0 17 chr17 2636826 2636886 -86867667 + (CGG)n Simple_repeat Simple_repeat 3 61 0 321 26 0 0 chr17 2636955 2636993 -86867560 + (GGA)n Simple_repeat Simple_repeat 1 38 0 338 243 0 0 chr17 2638076 2638179 -86866374 + GA-rich Low_complexity Low_complexity 2 104 0 230 345 12 12 chr17 2638757 2638841 -86865712 + MIR SINE MIR 2 85 -177 310 197 33 0 chr17 2639330 2639391 -86865162 + MIR SINE MIR 74 136 -72 227 357 0 18 chr17 2639459 2639571 -86864982 + L3 LINE CR1 1443 1552 -25 2242 88 0 0 chr17 2640187 2640481 -86864072 - AluSp SINE Alu -18 295 2 403 315 0 0 chr17 2641666 2642100 -86862453 + (TG)n Simple_repeat Simple_repeat 1 434 0 659 184 15 167 chr17 2642725 2642865 -86861688 - MIR SINE MIR -1 261 183 2188 98 0 3 chr17 2642865 2643160 -86861393 + AluSx SINE Alu 1 294 -18 659 184 15 167 chr17 2643160 2643307 -86861246 - MIR SINE MIR -79 183 15 303 325 149 24 chr17 2643332 2643587 -86860966 + L2 LINE L2 3013 3299 -14 192 40 0 0 chr17 2643587 2643612 -86860941 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 303 227 30 0 chr17 2643678 2643744 -86860809 + MIR SINE MIR 5 72 -190 989 198 160 55 chr17 2643745 2644088 -86860465 - MLT1G1 LTR MaLR 0 595 217 2122 117 0 3 chr17 2644097 2644404 -86860149 - AluY SINE Alu -5 306 1 2237 101 0 0 chr17 2644406 2644702 -86859851 - AluSx SINE Alu -16 296 1 1674 198 36 51 chr17 2645515 2645930 -86858623 + LTR2 LTR ERV1 41 449 0 229 170 0 21 chr17 2645931 2645978 -86858575 + MIR SINE MIR 85 130 -78 2345 73 3 0 chr17 2646031 2646332 -86858221 - AluSq SINE Alu -11 302 1 353 301 58 0 chr17 2646343 2646446 -86858107 - MIR SINE MIR -68 140 32 2140 100 0 28 chr17 2646757 2647078 -86857475 - AluSx SINE Alu 0 312 1 2132 95 10 7 chr17 2647078 2647382 -86857171 - AluSx SINE Alu -7 305 1 1585 186 34 3 chr17 2647386 2647681 -86856872 - AluJo SINE Alu -2 310 7 2311 94 0 0 chr17 2647691 2647998 -86856555 - AluY SINE Alu -4 307 1 322 874 0 27 chr17 2648002 2648295 -86856258 - L1MC4a LINE L1 -232 5889 5542 2381 147 112 68 chr17 2648295 2648359 -86856194 - MLT2B1 LTR ERVL 0 520 460 195 42 0 0 chr17 2648359 2648383 -86856170 + (TG)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2648383 2648425 -86856128 - MLT2B1 LTR ERVL -60 460 421 1927 122 0 45 chr17 2648425 2648737 -86855816 - AluSx SINE Alu -10 302 5 2381 147 112 68 chr17 2648737 2649127 -86855426 - MLT2B1 LTR ERVL -99 421 1 322 874 0 27 chr17 2649127 2649145 -86855408 - L1MC4a LINE L1 -578 5543 5572 1804 123 39 7 chr17 2649194 2649478 -86855075 - AluJb SINE Alu -18 294 2 1738 114 0 70 chr17 2649645 2649943 -86854610 + AluSx SINE Alu 36 312 0 2125 101 7 23 chr17 2650242 2650550 -86854003 - AluSx SINE Alu -9 303 1 181 373 127 0 chr17 2650582 2650700 -86853853 - MIR3 SINE MIR -30 178 46 2103 118 0 0 chr17 2651057 2651353 -86853200 + AluSx SINE Alu 4 299 -13 407 276 135 0 chr17 2651687 2651843 -86852710 + MIR SINE MIR 79 255 -7 2290 106 0 0 chr17 2651980 2652291 -86852262 - AluSx SINE Alu -1 311 1 366 161 0 0 chr17 2652524 2652586 -86851967 - MIR SINE MIR -116 146 85 2361 87 0 0 chr17 2653285 2653585 -86850968 - AluSq SINE Alu -13 300 1 191 365 54 0 chr17 2653641 2653715 -86850838 + L2 LINE L2 3168 3245 -27 341 313 29 34 chr17 2653787 2653950 -86850603 - MLT1K LTR MaLR -4 584 421 2068 89 38 0 chr17 2653950 2654241 -86850312 + AluSx SINE Alu 1 302 -10 341 313 29 34 chr17 2654241 2654285 -86850268 - MLT1K LTR MaLR -167 421 378 2336 102 0 3 chr17 2654995 2655309 -86849244 - AluSq SINE Alu 0 313 1 183 288 51 17 chr17 2655456 2655515 -86849038 - L2 LINE L2 -21 3251 3191 219 318 6 35 chr17 2655891 2656061 -86848492 + (TG)n Simple_repeat Simple_repeat 1 165 0 213 238 0 0 chr17 2657010 2657090 -86847463 + (TG)n Simple_repeat Simple_repeat 1 80 0 186 150 0 0 chr17 2657173 2657213 -86847340 + (TG)n Simple_repeat Simple_repeat 1 40 0 222 234 234 0 chr17 2658398 2658492 -86846061 + L2 LINE L2 3147 3262 -10 328 358 20 35 chr17 2659023 2659224 -86845329 + MIR SINE MIR 11 208 -54 279 331 24 0 chr17 2659717 2659844 -86844709 + (ATGGTG)n Simple_repeat Simple_repeat 2 131 0 395 214 0 11 chr17 2660370 2660459 -86844094 + MIR SINE MIR 92 179 -83 2289 107 0 0 chr17 2660971 2661279 -86843274 - AluSc SINE Alu -1 308 1 2338 95 0 0 chr17 2661324 2661628 -86842925 + AluSx SINE Alu 1 304 -8 474 18 0 0 chr17 2661726 2661781 -86842772 + (TG)n Simple_repeat Simple_repeat 1 55 0 2012 108 28 3 chr17 2662559 2662845 -86841708 + AluSq SINE Alu 1 293 -20 205 277 15 15 chr17 2662873 2662938 -86841615 - L2 LINE L2 -213 3059 2995 237 278 0 42 chr17 2663020 2663092 -86841461 + MIR SINE MIR 85 153 -109 283 260 13 0 chr17 2663428 2663505 -86841048 - MLT1K LTR MaLR -2 586 509 782 254 68 36 chr17 2663595 2663728 -86840825 + L1M4 LINE L1 4597 4724 -1422 1949 142 0 0 chr17 2663728 2664045 -86840508 + AluSx SINE Alu 1 317 0 782 254 68 36 chr17 2664045 2664162 -86840391 + L1M4 LINE L1 4724 4856 -1290 506 339 86 5 chr17 2664411 2664597 -86839956 - MIR SINE MIR -15 247 47 342 196 134 31 chr17 2664971 2665068 -86839485 + MIR3 SINE MIR 95 201 -7 396 283 53 0 chr17 2665157 2665270 -86839283 + L2 LINE L2 3194 3312 -1 2043 117 17 3 chr17 2665483 2665651 -86838902 - AluSx SINE Alu -8 304 129 198 0 0 0 chr17 2665651 2665673 -86838880 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2043 117 17 3 chr17 2665673 2665804 -86838749 - AluSx SINE Alu -183 129 1 192 135 0 0 chr17 2665878 2665915 -86838638 + (TG)n Simple_repeat Simple_repeat 2 38 0 2033 104 0 14 chr17 2666508 2666828 -86837725 - AluSx SINE Alu 0 316 1 206 31 0 31 chr17 2666828 2666860 -86837693 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1426 141 133 16 chr17 2666860 2667115 -86837438 - AluSx SINE Alu -27 285 1 1104 72 0 0 chr17 2667189 2667328 -86837225 - AluSq/x SINE Alu -173 139 1 1100 211 119 19 chr17 2668038 2668350 -86836203 + MER61B LTR ERV1 1 425 0 500 293 100 78 chr17 2670443 2670492 -86834061 - L3 LINE CR1 -2 1575 1529 1297 56 0 0 chr17 2670492 2670654 -86833899 - L1PA4 LINE L1 0 6155 5994 2496 72 0 0 chr17 2670654 2670960 -86833593 - AluSg SINE Alu -4 306 1 500 293 100 78 chr17 2670960 2671359 -86833194 - L3 LINE CR1 -47 1530 1116 241 212 30 81 chr17 2671419 2671518 -86833035 - MIR SINE MIR -56 152 59 2294 95 0 3 chr17 2671705 2672010 -86832543 - AluSx SINE Alu -8 304 1 1041 96 0 0 chr17 2672010 2672146 -86832407 - AluSq/x SINE Alu -177 136 1 669 207 5 88 chr17 2672774 2672839 -86831714 + MER5B DNA MER1_type 1 70 -108 2351 94 0 0 chr17 2672839 2673137 -86831416 + AluSq SINE Alu 1 298 -15 669 207 5 88 chr17 2673137 2673207 -86831346 + MER5B DNA MER1_type 70 118 -60 2076 104 0 17 chr17 2673207 2673506 -86831047 - AluSg SINE Alu -16 294 1 669 207 5 88 chr17 2673506 2673562 -86830991 + MER5B DNA MER1_type 118 177 -1 527 208 39 101 chr17 2673677 2673811 -86830742 - MER20 DNA MER1_type -25 194 76 2231 83 16 19 chr17 2673811 2674124 -86830429 + AluSx SINE Alu 1 312 0 527 208 39 101 chr17 2674124 2674196 -86830357 - MER20 DNA MER1_type -143 76 1 445 189 78 0 chr17 2674298 2674388 -86830165 + MIR SINE MIR 28 124 -138 368 278 45 65 chr17 2675162 2675351 -86829202 - MER5A DNA MER1_type -3 175 1 646 188 100 35 chr17 2675397 2675567 -86828986 + MIR SINE MIR 71 251 -11 2265 82 0 0 chr17 2675588 2675913 -86828640 - AluSx SINE Alu 0 325 1 2224 71 0 3 chr17 2676465 2676747 -86827806 - AluSx SINE Alu -8 304 24 3102 179 17 22 chr17 2676753 2677109 -86827444 - L1MB3 LINE L1 0 6183 5830 2061 130 0 19 chr17 2677109 2677425 -86827128 - AluSx SINE Alu -2 310 1 3102 179 17 22 chr17 2677425 2677655 -86826898 - L1MB3 LINE L1 -353 5830 5600 2189 108 3 0 chr17 2677656 2677952 -86826601 - AluSq SINE Alu -16 297 1 2257 99 3 0 chr17 2677963 2678267 -86826286 - AluY SINE Alu -6 305 1 2154 71 18 14 chr17 2678425 2678759 -86825794 - AluSx SINE Alu 0 335 1 797 278 17 30 chr17 2678878 2679112 -86825441 + MIR SINE MIR 32 262 0 2355 65 0 7 chr17 2679154 2679446 -86825107 - AluY SINE Alu -16 295 6 956 141 58 0 chr17 2679450 2679606 -86824947 - AluSg/x SINE Alu -6 304 140 2104 97 28 0 chr17 2679608 2679897 -86824656 - AluSx SINE Alu -13 299 3 1524 181 60 17 chr17 2679913 2680212 -86824341 - AluJb SINE Alu 0 312 1 298 313 110 49 chr17 2680219 2680465 -86824088 - L1MC/D LINE L1 -1988 5820 5560 2134 93 10 3 chr17 2680470 2680770 -86823783 + AluSq SINE Alu 1 302 -11 1685 96 57 57 chr17 2680865 2681166 -86823387 - AluSg SINE Alu 0 301 1 380 181 150 16 chr17 2681376 2681503 -86823050 - L1ME4a LINE L1 -3 6118 5975 2003 133 7 0 chr17 2681505 2681805 -86822748 - AluJb SINE Alu -10 302 1 872 150 33 56 chr17 2681808 2681988 -86822565 - MER3 DNA MER1_type -80 129 1 1483 181 18 18 chr17 2682471 2682752 -86821801 + AluJo SINE Alu 1 281 -31 237 33 0 0 chr17 2682752 2682782 -86821771 + (T)n Simple_repeat Simple_repeat 1 30 0 946 90 37 148 chr17 2682789 2682839 -86821714 + AluSx SINE Alu 11 65 -247 1298 25 12 6 chr17 2682839 2683002 -86821551 - L1PA4 LINE L1 0 6155 5992 946 90 37 148 chr17 2683002 2683140 -86821413 + AluSx SINE Alu 65 178 -134 2519 58 7 0 chr17 2683973 2684282 -86820271 + AluY SINE Alu 1 311 0 2245 102 3 0 chr17 2684297 2684592 -86819961 + AluSx SINE Alu 1 296 -16 2478 69 10 0 chr17 2684594 2684899 -86819654 + AluSp SINE Alu 3 310 -3 1561 180 50 11 chr17 2685082 2685365 -86819188 - AluJo SINE Alu -18 294 1 217 254 14 56 chr17 2685590 2685661 -86818892 - L2 LINE L2 -1 3312 3245 * 821 254 19 5 chr17 2685649 2685854 -86818699 + MIR SINE MIR 35 242 -20 2145 95 0 46 chr17 2686101 2686426 -86818127 - AluY SINE Alu -1 310 1 2268 110 0 0 chr17 2686857 2687165 -86817388 + AluSc SINE Alu 1 308 -1 368 330 64 34 chr17 2687421 2687657 -86816896 - L2 LINE L2 -50 3263 3021 1329 78 0 0 chr17 2687657 2687824 -86816729 + AluSx SINE Alu 1 167 -145 2342 84 7 0 chr17 2688190 2688498 -86816055 + AluSx SINE Alu 1 310 -2 296 197 68 68 chr17 2688561 2688678 -86815875 - L2 LINE L2 -277 3036 2920 2262 80 10 3 chr17 2689116 2689415 -86815138 - AluSx SINE Alu -11 301 1 783 197 0 0 chr17 2689950 2690082 -86814471 - FLAM_C SINE Alu 0 133 2 502 151 0 0 chr17 2690137 2690223 -86814330 - L1MB1 LINE L1 -1 6167 6082 2001 92 0 18 chr17 2690282 2690564 -86813989 + AluSx SINE Alu 22 298 -14 2308 61 0 10 chr17 2690565 2690882 -86813671 + AluSc SINE Alu 1 309 0 779 125 7 0 chr17 2691060 2691196 -86813357 + (TCCCC)n Simple_repeat Simple_repeat 1 137 0 2180 112 7 0 chr17 2691271 2691575 -86812978 - AluSx SINE Alu -6 306 1 248 217 130 99 chr17 2691575 2691736 -86812817 - L1MC4a LINE L1 -1863 5945 5780 1651 169 13 26 chr17 2691807 2692120 -86812433 + AluJo SINE Alu 1 309 -3 2266 105 0 0 chr17 2692122 2692427 -86812126 + AluSg SINE Alu 1 305 -5 2500 59 0 0 chr17 2692475 2692782 -86811771 + AluY SINE Alu 1 307 -4 1917 122 13 10 chr17 2692893 2693197 -86811356 + AluSx SINE Alu 1 305 -7 390 277 28 74 chr17 2693226 2693344 -86811209 - L1ME3 LINE L1 -316 5850 5728 2218 79 21 0 chr17 2693344 2693635 -86810918 - AluSx SINE Alu -15 297 1 390 277 28 74 chr17 2693635 2693670 -86810883 - L1ME3 LINE L1 -438 5728 5693 2001 53 0 0 chr17 2693670 2693915 -86810638 + AluY SINE Alu 64 308 -3 390 277 28 74 chr17 2693915 2694054 -86810499 - L1ME3 LINE L1 -473 5693 5565 1870 161 0 0 chr17 2694721 2695007 -86809546 + AluJb SINE Alu 9 294 -18 183 42 0 0 chr17 2695090 2695114 -86809439 + (TTAAA)n Simple_repeat Simple_repeat 1 24 0 2154 103 0 10 chr17 2695118 2695420 -86809133 - AluY SINE Alu -12 299 1 2183 78 0 3 chr17 2695429 2695711 -86808842 - AluSx SINE Alu -23 289 9 860 163 36 24 chr17 2695769 2695935 -86808618 + AluJo SINE Alu 123 290 -22 882 270 34 142 chr17 2696431 2696548 -86808005 - MLT1K LTR MaLR -21 567 439 1912 138 0 0 chr17 2696548 2696866 -86807687 + AluSx SINE Alu 1 318 0 882 270 34 142 chr17 2696866 2697176 -86807377 - MLT1K LTR MaLR -149 439 224 1850 160 0 0 chr17 2697176 2697469 -86807084 + AluJb SINE Alu 10 302 -10 882 270 34 142 chr17 2697469 2697658 -86806895 - MLT1K LTR MaLR -364 224 16 2254 93 0 0 chr17 2697803 2698104 -86806449 - AluY SINE Alu -10 301 1 311 307 11 0 chr17 2698105 2698193 -86806360 + MIR SINE MIR 62 150 -112 2307 97 0 3 chr17 2698205 2698516 -86806037 - AluSg SINE Alu 0 310 1 1091 188 21 52 chr17 2698895 2699183 -86805370 - MER113 DNA MER1_type? -43 478 200 2182 110 0 22 chr17 2699219 2699538 -86805015 + AluSx SINE Alu 1 312 0 1733 185 70 108 chr17 2699539 2699992 -86804561 - L1MC3 LINE L1 -35 7750 7281 1878 66 8 0 chr17 2699992 2700234 -86804319 - AluSp SINE Alu -7 306 63 1733 185 70 108 chr17 2700234 2700342 -86804211 - L1MC3 LINE L1 -504 7281 7211 2022 110 3 31 chr17 2700342 2700661 -86803892 - AluSx SINE Alu -2 310 1 1733 185 70 108 chr17 2700661 2700698 -86803855 - L1MC3 LINE L1 -574 7211 7174 661 154 89 8 chr17 2700723 2700846 -86803707 - FLAM_A SINE Alu 0 133 1 2087 115 0 0 chr17 2700914 2701209 -86803344 + AluJb SINE Alu 1 295 -17 1140 123 0 0 chr17 2701211 2701381 -86803172 + AluSq SINE Alu 141 310 -3 22 0 0 0 chr17 2701390 2701412 -86803141 + AT_rich Low_complexity Low_complexity 1 22 0 2373 60 0 10 chr17 2701502 2701804 -86802749 - AluY SINE Alu -12 299 1 2210 66 0 0 chr17 2702479 2702751 -86801802 + AluSx SINE Alu 34 305 -7 216 208 75 0 chr17 2703098 2703151 -86801402 + CT-rich Low_complexity Low_complexity 1 57 0 269 294 59 112 chr17 2703156 2703442 -86801111 - L2 LINE L2 -18 3295 3025 2219 93 7 3 chr17 2703483 2703785 -86800768 - AluSx SINE Alu -9 303 1 2354 80 0 0 chr17 2704207 2704518 -86800035 - AluY SINE Alu 0 311 1 2149 103 0 0 chr17 2705332 2705624 -86798929 - AluSx SINE Alu -3 309 18 710 227 178 58 chr17 2705625 2705779 -86798774 - L1ME2 LINE L1 -34 6130 5996 2048 111 0 0 chr17 2705779 2706092 -86798461 + AluSg SINE Alu 1 313 0 2017 126 0 3 chr17 2706100 2706401 -86798152 + AluSg SINE Alu 1 300 -10 710 227 178 58 chr17 2706401 2706601 -86797952 - L1ME2 LINE L1 -174 5990 5722 1164 129 0 6 chr17 2706603 2706796 -86797757 - AluSg/x SINE Alu 0 306 115 643 308 25 5 chr17 2706834 2707032 -86797521 - MIR SINE MIR -60 202 1 2344 70 0 0 chr17 2707202 2707504 -86797049 - AluSg SINE Alu -7 303 2 2105 108 3 13 chr17 2708697 2709012 -86795541 - AluSx SINE Alu 0 312 1 769 242 128 33 chr17 2710093 2710198 -86794355 - MER113 DNA MER1_type? -95 426 332 2512 50 0 0 chr17 2710198 2710498 -86794055 - AluY SINE Alu -11 300 1 769 242 128 33 chr17 2710498 2710665 -86793888 - MER113 DNA MER1_type? -189 332 182 2292 79 0 7 chr17 2710665 2710969 -86793584 + AluY SINE Alu 1 302 -9 2111 105 13 0 chr17 2710978 2711284 -86793269 + AluSq SINE Alu 1 310 -3 769 242 128 33 chr17 2711284 2711389 -86793164 - MER113 DNA MER1_type? -346 175 1 778 85 0 77 chr17 2711939 2712069 -86792484 - FLAM_C SINE Alu -13 130 11 210 37 0 0 chr17 2712526 2712553 -86792000 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 205 186 0 0 chr17 2712788 2712831 -86791722 + A-rich Low_complexity Low_complexity 2 44 0 237 239 18 46 chr17 2713655 2713764 -86790789 + G-rich Low_complexity Low_complexity 3 108 0 49 76 0 0 chr17 2713831 2713936 -86790617 + GC_rich Low_complexity Low_complexity 1 105 0 22 70 0 0 chr17 2713952 2713995 -86790558 + GC_rich Low_complexity Low_complexity 1 43 0 262 140 21 97 chr17 2714050 2714175 -86790378 + G-rich Low_complexity Low_complexity 1 115 0 1567 216 37 41 chr17 2715434 2715803 -86788750 - MER113 DNA MER1_type? -44 477 108 1863 115 3 11 chr17 2715803 2716112 -86788441 - AluSx SINE Alu 0 307 1 1567 216 37 41 chr17 2716112 2716204 -86788349 - MER113 DNA MER1_type? -413 108 17 2115 110 0 0 chr17 2718016 2718306 -86786247 + AluSx SINE Alu 1 290 -22 1389 187 74 107 chr17 2718620 2718824 -86785729 - L1MC5 LINE L1 -48 7913 7704 1542 144 7 22 chr17 2718824 2719094 -86785459 + AluJb SINE Alu 1 266 -46 1389 187 74 107 chr17 2719094 2719305 -86785248 - L1MC5 LINE L1 -257 7704 7488 2152 114 0 10 chr17 2719305 2719612 -86784941 - AluSx SINE Alu -8 304 1 1389 187 74 107 chr17 2719612 2719644 -86784909 - L1MC5 LINE L1 -473 7488 7456 1782 172 0 0 chr17 2719644 2719934 -86784619 - AluJb SINE Alu -22 290 1 1389 187 74 107 chr17 2719934 2720121 -86784432 - L1MC5 LINE L1 -505 7456 7298 859 304 98 43 chr17 2720633 2720791 -86783762 + L2 LINE L2 2606 2754 -559 2189 115 0 6 chr17 2720791 2721104 -86783449 - AluSx SINE Alu -1 311 1 859 304 98 43 chr17 2721104 2721611 -86782942 + L2 LINE L2 2754 3313 0 1096 113 57 0 chr17 2721674 2721833 -86782720 - AluSq SINE Alu -12 301 134 1993 78 0 75 chr17 2721833 2722154 -86782399 - AluY SINE Alu -14 297 1 281 167 0 77 chr17 2722820 2722898 -86781655 - MER113 DNA MER1_type? -308 213 142 2302 103 3 0 chr17 2722914 2723225 -86781328 + AluSx SINE Alu 1 312 0 2240 65 17 14 chr17 2723973 2724267 -86780286 + AluSq SINE Alu 1 295 -18 280 305 9 19 chr17 2724419 2724524 -86780029 - L2 LINE L2 -14 3299 3196 345 314 115 20 chr17 2724528 2724780 -86779773 + MER102a DNA MER1_type 34 309 -21 391 274 184 17 chr17 2725149 2725328 -86779225 - MIR SINE MIR -34 228 20 2091 101 3 0 chr17 2726781 2727098 -86777455 - AluSx SINE Alu 0 318 1 2012 134 0 3 chr17 2727100 2727398 -86777155 - AluSg SINE Alu -13 297 1 1612 283 67 16 chr17 2727420 2727975 -86776578 - MLT1K LTR MaLR -4 584 2 2250 96 0 3 chr17 2728715 2729017 -86775536 - AluSx SINE Alu -11 301 1 1846 190 25 11 chr17 2729043 2729401 -86775152 - MLT1A1 LTR MaLR 0 365 3 1043 186 80 0 chr17 2729414 2729640 -86774913 + L1MB4 LINE L1 5903 6146 -34 2085 104 7 10 chr17 2730316 2730615 -86773938 - AluSg SINE Alu -12 298 1 301 189 67 168 chr17 2730649 2730887 -86773666 - L1ME4a LINE L1 -11 6110 5897 649 288 91 81 chr17 2730889 2731142 -86773411 - MLT1K LTR MaLR -3 585 336 2211 119 0 0 chr17 2731142 2731454 -86773099 - AluSq SINE Alu -1 312 1 649 288 91 81 chr17 2731454 2731770 -86772783 - MLT1K LTR MaLR -252 336 10 715 278 66 32 chr17 2731819 2732140 -86772413 + L1MC4a LINE L1 5493 5826 -320 2080 116 34 0 chr17 2732140 2732433 -86772120 + AluSx SINE Alu 1 303 -9 682 295 114 41 chr17 2732457 2732870 -86771683 - MER65A LTR ERV1 -2 443 1 1185 164 121 4 chr17 2732893 2733125 -86771428 - AluJo SINE Alu -16 296 38 1261 138 0 0 chr17 2733132 2733321 -86771232 + AluSg/x SINE Alu 114 302 -10 1987 135 0 46 chr17 2733376 2733703 -86770850 + AluJb SINE Alu 1 312 0 547 117 43 0 chr17 2733860 2733954 -86770599 + L1MB5 LINE L1 6031 6128 -46 2074 81 3 47 chr17 2733954 2734274 -86770279 - AluSq SINE Alu 0 307 1 368 271 102 0 chr17 2734275 2734393 -86770160 + MIR SINE MIR 63 192 -70 954 216 121 67 chr17 2735150 2735260 -86769293 - LTR56 LTR ERV1 -1 444 341 2148 115 0 3 chr17 2735260 2735565 -86768988 - AluSx SINE Alu -8 304 1 954 216 121 67 chr17 2735565 2735875 -86768678 - LTR56 LTR ERV1 -104 341 1 250 343 0 19 chr17 2736003 2736108 -86768445 + L2 LINE L2 2304 2406 -908 2195 75 0 0 chr17 2736121 2736435 -86768118 - AluY SINE Alu 0 314 1 2795 149 16 69 chr17 2736476 2737081 -86767472 - MER4B LTR ERV1 -36 574 2 2363 75 7 0 chr17 2737082 2737387 -86767166 - AluSp SINE Alu -6 307 1 747 335 23 0 chr17 2737398 2737658 -86766895 + L2 LINE L2 2480 2745 -569 1958 107 0 11 chr17 2737664 2737935 -86766618 + AluSx SINE Alu 1 268 -44 309 371 54 5 chr17 2737978 2738164 -86766389 - L2 LINE L2 -530 2784 2590 271 280 229 0 chr17 2738425 2738582 -86765971 - L2 LINE L2 -896 2418 2226 436 363 14 5 chr17 2738990 2739213 -86765340 + MIR SINE MIR 34 258 -4 2215 123 0 0 chr17 2739312 2739613 -86764940 - AluSq SINE Alu -12 301 1 2483 100 0 0 chr17 2739750 2740060 -86764493 - AluSx SINE Alu -2 310 1 2349 98 0 3 chr17 2740062 2740359 -86764194 - AluSq SINE Alu -17 296 1 303 274 29 0 chr17 2740610 2740712 -86763841 - MIR SINE MIR -67 141 37 585 56 0 0 chr17 2740831 2740924 -86763629 + AluSp/q SINE Alu 212 304 0 366 232 191 10 chr17 2740952 2741146 -86763407 + L1 LINE L1 3722 3950 -2196 2498 94 0 0 chr17 2741423 2741732 -86762821 - AluSg SINE Alu -1 309 1 2389 79 6 29 chr17 2741983 2742299 -86762254 - AluY SINE Alu -2 309 1 2031 150 70 20 chr17 2742299 2742698 -86761855 + L1MD1 LINE L1 5582 6000 -359 778 171 7 7 chr17 2742701 2742853 -86761700 + L1MD1 LINE L1 6084 6235 -7 1258 108 12 0 chr17 2742855 2743022 -86761531 - AluSq SINE Alu -15 298 130 2223 99 0 48 chr17 2743412 2743726 -86760827 - AluSq SINE Alu -14 299 1 265 208 24 112 chr17 2743765 2743890 -86760663 - L2 LINE L2 -936 2378 2265 599 286 77 21 chr17 2744137 2744371 -86760182 + Charlie8 DNA MER1_type 26 272 -2145 587 167 19 0 chr17 2744399 2744507 -86760046 - L1MB5 LINE L1 -6 6168 6059 1732 122 0 8 chr17 2744508 2744754 -86759799 - AluSx SINE Alu -10 302 59 1020 93 10 62 chr17 2744855 2744991 -86759562 - L1MC/D LINE L1 -892 5467 5342 2204 117 0 0 chr17 2744991 2745281 -86759272 - AluSx SINE Alu -22 290 1 1020 93 10 62 chr17 2745281 2745337 -86759216 - L1MC/D LINE L1 -1017 5342 5285 2688 161 28 47 chr17 2745345 2745947 -86758606 - L1MB7 LINE L1 0 6184 5594 267 182 36 0 chr17 2745947 2746002 -86758551 - L1M4 LINE L1 -534 5650 5594 265 295 0 0 chr17 2745998 2746059 -86758494 - L1M4 LINE L1 -530 5654 5594 * 330 206 7 0 chr17 2746042 2746115 -86758438 - L1M3 LINE L1 -510 5670 5595 339 223 30 5 chr17 2746118 2746240 -86758313 - L1M1 LINE L1 -510 5670 5582 * 926 218 14 45 chr17 2746215 2746435 -86758118 - L1M4 LINE L1 -506 5668 5456 863 71 0 0 chr17 2746535 2746633 -86757920 - AluSq/x SINE Alu -186 126 29 180 97 0 0 chr17 2747266 2747297 -86757256 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1681 159 3 14 chr17 2747299 2747582 -86756971 - AluSx SINE Alu -30 282 3 427 94 0 0 chr17 2747699 2747763 -86756790 + Alu SINE Alu 236 299 -12 183 385 13 0 chr17 2747977 2748055 -86756498 - L2 LINE L2 -55 3258 3180 917 219 40 4 chr17 2748480 2748731 -86755822 - L1MB3 LINE L1 0 6183 5924 576 200 77 0 chr17 2748734 2748864 -86755689 - MER46A DNA MER2_type 0 236 97 1153 74 0 0 chr17 2748864 2748999 -86755554 + AluSq/x SINE Alu 1 135 -178 2277 116 3 0 chr17 2748999 2749301 -86755252 + AluSx SINE Alu 1 303 -9 592 162 0 0 chr17 2749301 2749400 -86755153 - MER46A DNA MER2_type -132 104 6 2026 98 0 4 chr17 2749526 2749781 -86754772 - AluSx SINE Alu -58 254 1 807 154 7 0 chr17 2749781 2749917 -86754636 + MLT1D LTR MaLR 367 503 -2 2158 97 49 3 chr17 2750359 2750647 -86753906 - AluSx SINE Alu -11 301 1 1447 97 181 30 chr17 2750912 2751211 -86753342 + THE1C LTR MaLR 7 350 -25 665 206 23 0 chr17 2751412 2751543 -86753010 + MER44D DNA MER2_type 600 605 0 275 278 17 17 chr17 2751543 2751658 -86752895 - L1M4 LINE L1 -2399 3747 3633 2564 81 0 7 chr17 2751677 2751987 -86752566 - AluSx SINE Alu -4 308 1 450 308 67 33 chr17 2752352 2752651 -86751902 + L1MC/D LINE L1 5493 5801 -320 373 210 0 27 chr17 2752652 2752759 -86751794 + AluS SINE Alu 2 84 -219 767 217 54 12 chr17 2753432 2753598 -86750955 - MER63A DNA MER1_type -37 173 1 23 0 0 0 chr17 2754498 2754521 -86750032 + AT_rich Low_complexity Low_complexity 1 23 0 1084 222 0 9 chr17 2754930 2755155 -86749398 - MER58A DNA MER1_type 0 224 2 228 185 11 179 chr17 2755164 2755312 -86749241 + MER113 DNA MER1_type? 1 114 -407 2349 91 13 3 chr17 2755312 2755621 -86748932 - AluSp SINE Alu 0 313 2 228 185 11 179 chr17 2755621 2755656 -86748897 + MER113 DNA MER1_type? 114 153 -368 1874 125 96 0 chr17 2757197 2757477 -86747076 - AluSx SINE Alu -5 307 1 201 74 0 0 chr17 2758165 2758192 -86746361 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 1147 307 60 73 chr17 2758486 2758693 -86745860 - L1M4 LINE L1 -2292 3854 3646 1474 88 206 88 chr17 2758693 2758965 -86745588 - AluSq SINE Alu -9 304 1 1147 307 60 73 chr17 2758965 2759520 -86745033 - L1M4 LINE L1 -2500 3646 3102 283 224 75 0 chr17 2759603 2759670 -86744883 - MIR SINE MIR -85 177 106 740 186 8 0 chr17 2759728 2759857 -86744696 - FLAM_C SINE Alu 0 133 4 337 308 28 41 chr17 2759864 2760182 -86744371 - L1M4 LINE L1 -3104 3042 2729 2023 142 17 0 chr17 2760266 2760555 -86743998 - AluJb SINE Alu -18 294 1 1058 284 83 11 chr17 2760561 2761004 -86743549 + L1MC/D LINE L1 5287 5761 -2047 1719 103 0 0 chr17 2761010 2761233 -86743320 - AluSg/x SINE Alu -1 309 87 922 215 77 11 chr17 2761357 2761650 -86742903 - L1ME LINE L1 -567 5580 5244 2560 72 0 0 chr17 2761659 2761965 -86742588 - AluY SINE Alu -5 306 1 2424 91 0 0 chr17 2761967 2762265 -86742288 - AluSg SINE Alu -12 298 1 636 167 15 38 chr17 2762265 2762397 -86742156 - AluJo/FLAM SINE Alu -173 129 1 2150 129 0 13 chr17 2762399 2762710 -86741843 - AluJb SINE Alu -5 307 1 1058 221 50 31 chr17 2762712 2762870 -86741683 - L1ME LINE L1 -947 5182 5029 2298 102 0 13 chr17 2762870 2763175 -86741378 - AluSc SINE Alu -8 301 1 1058 221 50 31 chr17 2763175 2763373 -86741180 - L1ME LINE L1 -1100 5029 4819 627 311 5 0 chr17 2763421 2763617 -86740936 - MER117 DNA MER1_type 0 197 1 325 212 71 62 chr17 2763620 2763733 -86740820 - MIR SINE MIR -135 127 14 181 331 33 41 chr17 2763701 2763822 -86740731 + MIR SINE MIR 34 153 -55 * 196 196 0 54 chr17 2764420 2764532 -86740021 + C-rich Low_complexity Low_complexity 3 108 0 837 228 92 13 chr17 2766258 2766486 -86738067 + MIR SINE MIR 16 261 -1 477 130 0 0 chr17 2766534 2766603 -86737950 + AluS SINE Alu 2 70 -242 1894 75 0 17 chr17 2766710 2766951 -86737602 - AluSq SINE Alu -76 237 1 969 285 73 39 chr17 2766951 2767750 -86736803 - L1ME LINE L1 -2867 3262 2437 426 275 72 4 chr17 2768297 2768533 -86736020 - L1ME LINE L1 -3759 2370 2119 2184 123 7 13 chr17 2768547 2768857 -86735696 - AluSx SINE Alu -4 308 1 202 222 25 49 chr17 2768886 2768967 -86735586 + T-rich Low_complexity Low_complexity 2 80 0 252 339 87 32 chr17 2769290 2769431 -86735122 - HAL1b LINE L1 -702 646 487 2445 77 0 26 chr17 2769431 2769744 -86734809 - AluY SINE Alu -6 305 1 252 339 87 32 chr17 2769744 2769820 -86734733 - HAL1b LINE L1 -861 487 417 23 54 0 0 chr17 2769877 2769914 -86734639 + AT_rich Low_complexity Low_complexity 1 37 0 519 299 54 9 chr17 2769975 2770199 -86734354 - L1ME LINE L1 -4898 1221 988 219 335 112 29 chr17 2770235 2770262 -86734291 + L2 LINE L2 2661 2684 -630 2250 124 0 0 chr17 2770262 2770569 -86733984 - AluSq SINE Alu -5 308 2 219 335 112 29 chr17 2770569 2770711 -86733842 + L2 LINE L2 2684 2844 -470 285 167 0 0 chr17 2770931 2770979 -86733574 - Alu SINE Alu -247 52 5 2323 63 14 3 chr17 2772891 2773177 -86731376 - AluSx SINE Alu -23 289 1 189 74 0 0 chr17 2774642 2774669 -86729884 + (ATG)n Simple_repeat Simple_repeat 2 28 0 237 297 51 93 chr17 2774721 2774809 -86729744 - MIR SINE MIR -65 143 60 2393 87 3 13 chr17 2774809 2775118 -86729435 + AluSg SINE Alu 1 306 -4 237 297 51 93 chr17 2775118 2775147 -86729406 - MIR SINE MIR -148 60 31 280 355 11 0 chr17 2775263 2775356 -86729197 - MIR SINE MIR -60 148 55 231 193 35 0 chr17 2775629 2775686 -86728867 + T-rich Low_complexity Low_complexity 2 60 0 228 154 0 0 chr17 2775811 2775863 -86728690 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 467 266 140 70 chr17 2775920 2776443 -86728110 - L1MEc LINE L1 -3574 2641 2119 2317 85 0 10 chr17 2777645 2777940 -86726613 - AluY SINE Alu -19 292 1 252 333 43 11 chr17 2778735 2778828 -86725725 + L2 LINE L2 3168 3263 -9 604 291 28 14 chr17 2779658 2779871 -86724682 - MIR SINE MIR -33 229 14 214 200 186 0 chr17 2780041 2780111 -86724442 + MER5A DNA MER1_type 85 167 -22 201 167 19 56 chr17 2780626 2780680 -86723873 + C-rich Low_complexity Low_complexity 2 53 0 2375 100 7 0 chr17 2781256 2781565 -86722988 - AluSx SINE Alu -1 311 1 316 311 8 42 chr17 2781569 2781688 -86722865 - MIR SINE MIR -101 161 47 414 263 68 8 chr17 2781735 2781853 -86722700 + MIR3 SINE MIR 30 154 -54 325 266 79 79 chr17 2782693 2782870 -86721683 + MIR SINE MIR 15 191 -71 2634 62 0 0 chr17 2784255 2784562 -86719991 - AluY SINE Alu -4 307 1 451 326 59 0 chr17 2785354 2785575 -86718978 + L1MC/D LINE L1 5567 5800 -2008 * 756 261 22 14 chr17 2785563 2785839 -86718714 + L1MB5 LINE L1 3334 3611 -2535 * 2579 205 31 7 chr17 2785818 2786512 -86718041 + L1MB5 LINE L1 5182 5890 -284 2252 96 0 0 chr17 2786517 2786842 -86717711 + AluSg SINE Alu 1 325 0 378 211 0 10 chr17 2786902 2787005 -86717548 + L1M4 LINE L1 5597 5694 -470 2151 38 0 0 chr17 2787005 2787244 -86717309 + AluY SINE Alu 1 239 -72 2262 109 3 0 chr17 2788977 2789279 -86715274 + AluSx SINE Alu 2 304 -8 2287 121 3 0 chr17 2789354 2789661 -86714892 - AluSq SINE Alu -5 308 1 345 334 76 12 chr17 2790033 2790278 -86714275 + MIR SINE MIR 3 261 -1 313 314 211 42 chr17 2791168 2791429 -86713124 + L2 LINE L2 2966 3270 -2 180 404 19 0 chr17 2791605 2791709 -86712844 - MIR SINE MIR -110 152 47 336 248 0 76 chr17 2791734 2791839 -86712714 - MIR SINE MIR -106 156 60 1422 19 0 0 chr17 2792098 2792260 -86712293 + L1PA4 LINE L1 5994 6155 0 272 310 78 16 chr17 2792521 2792669 -86711884 + MIR SINE MIR 21 192 -70 1108 153 45 0 chr17 2792773 2792992 -86711561 + AluSg/x SINE Alu 98 324 0 1420 118 34 58 chr17 2792992 2793153 -86711400 + L1M3 LINE L1 5319 5471 -697 2182 76 6 29 chr17 2793153 2793469 -86711084 + AluSc SINE Alu 1 309 0 1420 118 34 58 chr17 2793469 2793603 -86710950 + L1M3 LINE L1 5471 5607 -561 4097 219 55 63 chr17 2793620 2794149 -86710404 - L1M4 LINE L1 -1191 4955 4423 2211 74 29 29 chr17 2794149 2794460 -86710093 - AluY SINE Alu 0 311 1 4097 219 55 63 chr17 2794460 2795064 -86709489 - L1M4 LINE L1 -1723 4423 3834 2154 109 3 3 chr17 2795064 2795376 -86709177 - AluSx SINE Alu 0 312 1 4097 219 55 63 chr17 2795376 2795735 -86708818 - L1M4 LINE L1 -2312 3834 3474 229 209 149 88 chr17 2795971 2796045 -86708508 - MER5A DNA MER1_type -32 157 89 2233 92 3 0 chr17 2796045 2796340 -86708213 - AluSq SINE Alu -17 296 1 229 209 149 88 chr17 2796340 2796413 -86708140 - MER5A DNA MER1_type -100 89 1 452 246 25 49 chr17 2796811 2796933 -86707620 - L2 LINE L2 -2 3311 3193 191 277 161 36 chr17 2797369 2797506 -86707047 - MIR SINE MIR -13 249 96 200 244 0 0 chr17 2798672 2798713 -86705840 - L2 LINE L2 -3 3269 3229 2200 126 7 0 chr17 2799327 2799637 -86704916 - AluSx SINE Alu 0 312 1 338 291 48 79 chr17 2799786 2799891 -86704662 - MIR SINE MIR -13 249 151 2372 95 0 0 chr17 2799891 2800196 -86704357 - AluSx SINE Alu -7 305 1 338 291 48 79 chr17 2800196 2800279 -86704274 - MIR SINE MIR -111 151 67 186 381 27 34 chr17 2800514 2800661 -86703892 + L2 LINE L2 2909 3054 -218 313 190 0 0 chr17 2800665 2800723 -86703830 + MLT1F1 LTR MaLR 6 63 -504 2116 128 3 0 chr17 2800728 2801026 -86703527 + AluJb SINE Alu 7 305 -7 2196 106 0 19 chr17 2801037 2801370 -86703183 + AluSx SINE Alu 1 312 0 367 342 21 13 chr17 2801594 2801818 -86702735 - L1MC/D LINE L1 -382 5739 5579 357 318 139 40 chr17 2802102 2802157 -86702396 - MIR SINE MIR -11 251 203 2013 141 3 0 chr17 2802157 2802462 -86702091 - AluSq SINE Alu -7 306 1 357 318 139 40 chr17 2802462 2802629 -86701924 - MIR SINE MIR -59 203 7 707 217 28 28 chr17 2802877 2803057 -86701496 - MER104 DNA MER2_type 0 180 1 2222 103 0 0 chr17 2803256 2803548 -86701005 + AluSx SINE Alu 1 292 -20 248 229 29 0 chr17 2803983 2804053 -86700500 - L2 LINE L2 -284 2988 2917 1770 75 4 8 chr17 2804842 2805082 -86699471 - AluSg/x SINE Alu -1 311 73 543 44 0 0 chr17 2805083 2805151 -86699402 - AluY SINE Alu -10 299 232 21 0 0 0 chr17 2805151 2805172 -86699381 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr17 2806374 2806407 -86698146 + (CA)n Simple_repeat Simple_repeat 2 34 0 2252 97 13 7 chr17 2806537 2806846 -86697707 - AluSx SINE Alu -1 311 1 262 130 0 43 chr17 2806847 2806916 -86697637 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 239 326 61 0 chr17 2808253 2808351 -86696202 - MER91A DNA MER1_type -48 148 45 1881 143 14 10 chr17 2808440 2808734 -86695819 - AluJo SINE Alu -15 297 3 272 326 22 0 chr17 2809376 2809468 -86695085 + L3b LINE CR1 1283 1376 -207 814 246 44 68 chr17 2809981 2810235 -86694318 + MLT1D LTR MaLR 1 245 -260 2511 34 0 0 chr17 2810235 2810528 -86694025 + AluY SINE Alu 1 293 -18 814 246 44 68 chr17 2810528 2810639 -86693914 + MLT1D LTR MaLR 245 357 -148 212 356 0 42 chr17 2811202 2811320 -86693233 + C-rich Low_complexity Low_complexity 2 114 0 754 257 104 47 chr17 2811679 2812123 -86692430 + HAL1b LINE L1 874 1342 -6 723 119 12 226 chr17 2812187 2812207 -86692346 + AluSg/x SINE Alu 118 141 -168 2134 95 10 17 chr17 2812207 2812503 -86692050 + AluSx SINE Alu 1 294 -18 2333 84 3 0 chr17 2812503 2812799 -86691754 + AluSg SINE Alu 1 297 -13 723 119 12 226 chr17 2812799 2813020 -86691533 + AluSg/x SINE Alu 139 308 -1 1194 238 3 40 chr17 2813498 2813821 -86690732 + MLT1A1 LTR MaLR 55 365 0 389 249 136 45 chr17 2813822 2814087 -86690466 + MLT1C LTR MaLR 94 382 -123 415 200 3 114 chr17 2814258 2814339 -86690214 + MLT1C LTR MaLR 349 388 -79 2155 113 0 10 chr17 2814339 2814650 -86689903 + AluSx SINE Alu 1 308 -4 415 200 3 114 chr17 2814650 2814720 -86689833 + MLT1C LTR MaLR 388 464 -3 382 333 85 7 chr17 2815156 2815297 -86689256 - MIR SINE MIR -35 227 76 1175 128 35 62 chr17 2815612 2815838 -86688715 + AluJo SINE Alu 86 305 -7 2379 81 7 0 chr17 2815841 2816150 -86688403 + AluSx SINE Alu 1 311 -1 583 265 24 30 chr17 2816908 2817024 -86687529 - MIR SINE MIR 0 262 146 2712 139 12 21 chr17 2817024 2817384 -86687169 + MSTA LTR MaLR 1 358 -70 2294 105 3 0 chr17 2817384 2817688 -86686865 - AluSg SINE Alu -5 305 1 2712 139 12 21 chr17 2817688 2817759 -86686794 + MSTA LTR MaLR 358 428 0 583 265 24 30 chr17 2817759 2817808 -86686745 - MIR SINE MIR -116 146 98 2102 130 0 0 chr17 2817826 2818118 -86686435 + AluSx SINE Alu 1 292 -20 1026 90 0 0 chr17 2818137 2818270 -86686283 + AluSq/x SINE Alu 1 133 -180 2119 81 4 0 chr17 2818272 2818545 -86686008 + AluSp SINE Alu 1 274 -39 922 191 7 0 chr17 2818646 2818905 -86685648 + L1MA4 LINE L1 5172 5432 -743 * 1106 171 19 0 chr17 2818898 2819108 -86685445 - L1M4 LINE L1 -493 5691 5478 5152 131 30 15 chr17 2819146 2819625 -86684928 + L1MA4 LINE L1 5430 5928 -372 2240 92 16 3 chr17 2819625 2819931 -86684622 + AluSx SINE Alu 1 310 -2 5152 131 30 15 chr17 2819931 2820299 -86684254 + L1MA4 LINE L1 5928 6289 -11 291 228 22 33 chr17 2820394 2820486 -86684067 - L2 LINE L2 -182 3090 3000 247 308 239 0 chr17 2821202 2821319 -86683234 - MIR3 SINE MIR -22 186 42 1430 174 0 8 chr17 2821838 2822085 -86682468 - AluJb SINE Alu -26 286 42 542 333 4 71 chr17 2822203 2822274 -86682279 + MIR SINE MIR 1 75 -187 2084 86 18 0 chr17 2822274 2822573 -86681980 - AluSg SINE Alu 0 304 1 542 333 4 71 chr17 2822573 2822755 -86681798 + MIR SINE MIR 75 238 -24 348 24 0 0 chr17 2823400 2823441 -86681112 + (CA)n Simple_repeat Simple_repeat 1 41 0 214 214 0 0 chr17 2823593 2823635 -86680918 - MIR SINE MIR -110 152 111 367 252 48 0 chr17 2823645 2823748 -86680805 + MIR SINE MIR 81 188 -74 432 323 117 68 chr17 2824420 2824668 -86679885 + MIR SINE MIR 3 262 0 317 314 191 0 chr17 2825052 2825288 -86679265 + MLT1L LTR MaLR 218 498 -117 2152 101 0 13 chr17 2825522 2825820 -86678733 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 2826330 2826352 -86678201 + AT_rich Low_complexity Low_complexity 1 22 0 544 167 0 0 chr17 2826352 2826436 -86678117 - FLAM_C SINE Alu -25 118 35 2189 92 7 23 chr17 2826503 2826809 -86677744 + AluSx SINE Alu 1 301 -11 1099 194 45 4 chr17 2826901 2827148 -86677405 + MER7A DNA MER2_type 1 255 -91 321 197 58 88 chr17 2827165 2827302 -86677251 + MER7A DNA MER2_type 214 346 0 303 308 121 11 chr17 2827353 2827535 -86677018 - MIR SINE MIR -29 233 32 246 105 0 0 chr17 2827645 2827683 -86676870 + (A)n Simple_repeat Simple_repeat 1 38 0 210 37 0 0 chr17 2828659 2828686 -86675867 + (T)n Simple_repeat Simple_repeat 1 27 0 1369 105 51 39 chr17 2828833 2829090 -86675463 + AluSq SINE Alu 46 305 -8 2354 79 0 19 chr17 2829472 2829790 -86674763 + AluSx SINE Alu 1 312 0 2424 62 7 0 chr17 2830334 2830640 -86673913 - AluSc SINE Alu -1 308 1 400 331 51 11 chr17 2831414 2831589 -86672964 - MIR SINE MIR 0 262 81 213 380 26 9 chr17 2831702 2831815 -86672738 + MIR SINE MIR 23 137 -71 368 302 0 0 chr17 2831934 2832030 -86672523 - L3 LINE CR1 -78 1499 1404 548 330 90 67 chr17 2832865 2833963 -86670590 + L2 LINE L2 2131 3258 -14 2384 75 0 0 chr17 2833967 2834261 -86670292 + AluY SINE Alu 1 294 -17 2310 93 0 10 chr17 2834270 2834581 -86669972 + AluSx SINE Alu 1 308 -4 226 286 88 23 chr17 2835644 2835804 -86668749 - MIR SINE MIR -70 192 23 213 219 109 78 chr17 2835876 2835940 -86668613 + MER5A DNA MER1_type 59 124 -65 209 311 118 37 chr17 2837514 2837675 -86666878 + MIR SINE MIR 65 238 -24 453 203 142 14 chr17 2837827 2837975 -86666578 - MIR3 SINE MIR -15 193 27 2158 112 13 0 chr17 2838439 2838742 -86665811 + AluSg SINE Alu 1 307 -3 2234 104 0 3 chr17 2840451 2840758 -86663795 + AluSx SINE Alu 1 306 -6 270 95 0 0 chr17 2840875 2840917 -86663636 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 838 127 0 0 chr17 2840917 2841035 -86663518 - FLAM_C SINE Alu -25 118 1 2071 116 30 3 chr17 2842748 2843049 -86661504 - AluSg SINE Alu -1 309 1 509 202 0 0 chr17 2843627 2843721 -86660832 + FRAM SINE Alu 68 161 -15 255 320 0 13 chr17 2843831 2843906 -86660647 - MIR SINE MIR -12 250 177 370 268 183 0 chr17 2844695 2844860 -86659693 - MIR SINE MIR -60 148 6 262 395 0 0 chr17 2844858 2844993 -86659560 + MIR SINE MIR 31 140 -68 * 2202 75 0 4 chr17 2845585 2845864 -86658689 + AluSq SINE Alu 1 278 -35 231 36 0 0 chr17 2845864 2845892 -86658661 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 488 307 84 6 chr17 2846439 2846605 -86657948 + MIR3 SINE MIR 5 183 -25 235 198 88 77 chr17 2846612 2846645 -86657908 + HsTC2 DNA Tc2 1 32 -1866 1692 159 0 36 chr17 2846645 2846947 -86657606 - AluJb SINE Alu -21 291 1 235 198 88 77 chr17 2846947 2847004 -86657549 + HsTC2 DNA Tc2 32 92 -1806 200 59 29 0 chr17 2847092 2847126 -86657427 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2115 96 0 7 chr17 2847128 2847408 -86657145 - AluSc SINE Alu -31 278 1 609 210 11 81 chr17 2847409 2847465 -86657088 - MIR SINE MIR -65 197 139 2041 101 7 42 chr17 2847465 2847771 -86656782 - AluSg SINE Alu -15 295 1 609 210 11 81 chr17 2847771 2847900 -86656653 - MIR SINE MIR -123 139 25 223 279 29 0 chr17 2847909 2847977 -86656576 + GA-rich Low_complexity Low_complexity 5 74 0 232 271 0 0 chr17 2847979 2848027 -86656526 - L2 LINE L2 -15 3257 3210 226 165 0 196 chr17 2848157 2848254 -86656299 - L1M3 LINE L1 -653 5527 5450 2346 89 0 0 chr17 2848259 2848562 -86655991 - AluY SINE Alu -8 303 1 1557 110 0 13 chr17 2848562 2848736 -86655817 - AluSg/x SINE Alu -5 307 135 2056 125 0 3 chr17 2848736 2849032 -86655521 - AluSg SINE Alu -15 295 1 1557 110 0 13 chr17 2849032 2849084 -86655469 - AluSg/x SINE Alu -177 135 84 299 295 19 38 chr17 2849270 2849375 -86655178 + L2 LINE L2 3208 3310 -3 226 286 29 0 chr17 2849966 2850036 -86654517 + CT-rich Low_complexity Low_complexity 1 72 0 306 350 0 8 chr17 2850795 2850812 -86653741 + MIR SINE MIR 22 38 -224 2285 95 0 3 chr17 2850812 2851116 -86653437 - AluSx SINE Alu -9 303 1 306 350 0 8 chr17 2851116 2851215 -86653338 + MIR SINE MIR 38 137 -125 207 273 82 45 chr17 2851330 2851440 -86653113 - L2 LINE L2 -12 3301 3188 2421 65 3 3 chr17 2851464 2851773 -86652780 - AluSg SINE Alu 0 310 2 243 0 0 0 chr17 2852578 2852605 -86651948 + (TG)n Simple_repeat Simple_repeat 2 28 0 2270 103 0 0 chr17 2852614 2852914 -86651639 - AluSx SINE Alu -12 300 1 23 33 0 0 chr17 2852919 2852949 -86651604 + AT_rich Low_complexity Low_complexity 1 30 0 807 222 5 31 chr17 2853294 2853488 -86651065 + MIR SINE MIR 47 235 -27 1830 138 46 0 chr17 2853517 2853800 -86650753 - AluSx SINE Alu -16 296 1 2284 85 3 3 chr17 2853820 2854115 -86650438 - AluSq SINE Alu -16 297 3 2114 126 3 0 chr17 2854115 2854416 -86650137 - AluSx SINE Alu -10 302 1 4337 163 29 12 chr17 2854577 2855084 -86649469 - L1MA5 LINE L1 -4 6296 5770 1989 113 12 41 chr17 2855084 2855404 -86649149 - AluSx SINE Alu -1 311 1 4337 163 29 12 chr17 2855404 2855653 -86648900 - L1MA5 LINE L1 -530 5770 5527 2151 93 0 17 chr17 2856123 2856296 -86648257 - AluSx SINE Alu -10 302 135 249 108 0 0 chr17 2856296 2856333 -86648220 + (TA)n Simple_repeat Simple_repeat 2 38 0 2151 93 0 17 chr17 2856333 2856460 -86648093 - AluSx SINE Alu -177 135 7 468 175 34 73 chr17 2857098 2857123 -86647430 - HAL1 LINE L1 -335 2172 2148 2453 62 0 7 chr17 2857123 2857428 -86647125 - AluY SINE Alu -8 303 1 468 175 34 73 chr17 2857428 2857579 -86646974 - HAL1 LINE L1 -359 2148 2003 1833 174 23 0 chr17 2857579 2857883 -86646670 - AluJo SINE Alu -1 311 1 1132 224 74 55 chr17 2858044 2858253 -86646300 - HAL1 LINE L1 -809 1698 1494 2349 96 0 3 chr17 2858253 2858566 -86645987 - AluSx SINE Alu 0 312 1 1132 224 74 55 chr17 2858566 2858776 -86645777 - HAL1 LINE L1 -1013 1494 1271 681 277 49 71 chr17 2858783 2859291 -86645262 - MLT1G LTR MaLR -51 539 38 263 229 169 0 chr17 2859326 2859444 -86645109 - HAL1 LINE L1 -1254 1253 1116 2266 83 0 40 chr17 2859457 2859783 -86644770 - AluSq SINE Alu 0 313 1 251 253 12 24 chr17 2859783 2859866 -86644687 - HAL1 LINE L1 -2425 82 1 906 101 0 0 chr17 2860450 2860569 -86643984 + AluSq/x SINE Alu 15 133 -179 2069 114 0 26 chr17 2860582 2860888 -86643665 + AluSx SINE Alu 1 298 -14 364 270 9 18 chr17 2861521 2861632 -86642921 + MER113 DNA MER1_type? 84 193 -328 627 288 83 0 chr17 2861778 2861983 -86642570 + MIR SINE MIR 2 223 -39 2239 82 0 3 chr17 2862028 2862320 -86642233 - AluSx SINE Alu -21 291 1 242 322 42 17 chr17 2862857 2862975 -86641578 + MIR SINE MIR 20 140 -68 2197 116 0 3 chr17 2863497 2863808 -86640745 + AluSq SINE Alu 1 310 -3 1534 102 204 8 chr17 2863857 2864102 -86640451 - AluSg1 SINE Alu -16 293 1 1980 130 31 0 chr17 2864362 2864654 -86639899 - AluJb SINE Alu -11 301 1 461 293 140 0 chr17 2865216 2865373 -86639180 - MIR SINE MIR -26 236 58 948 212 9 4 chr17 2865387 2865617 -86638936 - L1MB7 LINE L1 -158 6026 5801 2108 73 3 28 chr17 2865635 2865953 -86638600 - AluY SINE Alu 0 311 1 2074 114 3 3 chr17 2865955 2866245 -86638308 - AluSx SINE Alu -14 298 9 22 35 0 0 chr17 2866254 2866283 -86638270 + AT_rich Low_complexity Low_complexity 1 29 0 547 236 0 0 chr17 2866283 2866410 -86638143 - L1MB7 LINE L1 -355 5829 5703 180 0 0 0 chr17 2866807 2866827 -86637726 + (CAT)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 2866869 2866892 -86637661 + AT_rich Low_complexity Low_complexity 1 23 0 2283 76 0 0 chr17 2866894 2867184 -86637369 - AluSq SINE Alu -23 290 1 431 228 60 54 chr17 2867207 2867356 -86637197 - MIR SINE MIR -103 159 10 880 241 55 8 chr17 2868380 2868637 -86635916 - MLT1C LTR MaLR 0 467 199 2156 116 0 7 chr17 2868660 2868961 -86635592 - AluSx SINE Alu -13 299 1 354 45 0 0 chr17 2870973 2871017 -86633536 + (TG)n Simple_repeat Simple_repeat 1 44 0 590 249 133 0 chr17 2871100 2871265 -86633288 - MER5A DNA MER1_type -2 187 1 2222 97 0 3 chr17 2871325 2871625 -86632928 - AluSq SINE Alu -14 299 1 240 86 0 0 chr17 2872526 2872561 -86631992 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 1375 254 178 6 chr17 2873292 2873793 -86630760 - MLT1K LTR MaLR 0 588 2 431 263 9 171 chr17 2873797 2874143 -86630410 - L2 LINE L2 -25 3247 2958 519 301 75 0 chr17 2874148 2874255 -86630298 + MER5A DNA MER1_type 4 130 -59 2278 75 3 0 chr17 2874255 2874548 -86630005 - AluSg SINE Alu -16 294 1 519 301 75 0 chr17 2874548 2874613 -86629940 + MER5A DNA MER1_type 130 189 0 754 311 179 19 chr17 2874667 2875171 -86629382 - L2 LINE L2 -410 2904 2482 1507 187 33 0 chr17 2875171 2875444 -86629109 - AluJo SINE Alu -25 287 6 754 311 179 19 chr17 2875444 2875678 -86628875 - L2 LINE L2 -832 2482 2048 216 0 0 0 chr17 2925860 2925884 -86578669 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 747 196 32 31 chr17 2926235 2926543 -86578010 + MER31B LTR ERV1 1 390 -76 415 185 25 0 chr17 2926516 2926597 -86577956 + MER67D LTR ERV1 432 514 0 * 519 208 68 59 chr17 2926724 2926926 -86577627 - LTR16B LTR ERVL -17 447 241 2501 65 0 0 chr17 2926926 2927235 -86577318 + AluSg1 SINE Alu 1 309 0 519 208 68 59 chr17 2927235 2927268 -86577285 - LTR16B LTR ERVL -223 241 210 1551 202 91 142 chr17 2928158 2928941 -86575612 + LTR41 LTR ERVL 25 767 -6 2511 112 10 8 chr17 2929511 2929896 -86574657 - L1PB3 LINE L1 0 6154 5769 5912 53 21 7 chr17 2929896 2930652 -86573901 - L1PA7 LINE L1 -1 6153 5387 1423 225 209 23 chr17 2930659 2931299 -86573254 - HAL1 LINE L1 -296 2211 1453 377 306 70 32 chr17 2931634 2931863 -86572690 - L1M4 LINE L1 -1458 4688 4469 2138 105 0 0 chr17 2931863 2932158 -86572395 - AluSx SINE Alu -17 295 1 377 306 70 32 chr17 2932158 2932434 -86572119 - L1M4 LINE L1 -1677 4469 4164 329 296 141 68 chr17 2932531 2932913 -86571640 - L1M4 LINE L1 -1832 4314 3905 2024 81 7 20 chr17 2934742 2935038 -86569515 - AluSx SINE Alu -20 292 1 285 29 0 0 chr17 2935487 2935521 -86569032 + (TG)n Simple_repeat Simple_repeat 1 34 0 350 253 24 12 chr17 2935915 2935998 -86568555 - L2 LINE L2 -2 3311 3228 216 357 104 25 chr17 2936117 2936397 -86568156 + L2 LINE L2 2511 2812 -502 790 273 52 26 chr17 2936421 2936688 -86567865 + LTR16A LTR ERVL 9 282 -168 1123 193 73 46 chr17 2936688 2937051 -86567502 + MLT1A1 LTR MaLR 1 396 0 257 300 115 8 chr17 2937074 2937204 -86567349 + LTR16A LTR ERVL 307 450 0 1702 190 34 58 chr17 2937614 2937729 -86566824 - L1M2 LINE L1 -583 5708 5592 1601 174 0 17 chr17 2937729 2938023 -86566530 - AluJb SINE Alu -22 290 2 1702 190 34 58 chr17 2938023 2938776 -86565777 - L1M2 LINE L1 -699 5592 4314 * 4597 141 42 21 chr17 2938753 2939746 -86564807 - L1PA16 LINE L1 0 6166 5123 2178 168 13 2 chr17 2939734 2940127 -86564426 - L1M2 LINE L1 -1945 4201 3805 * 1369 280 24 53 chr17 2940217 2940712 -86563841 - L1M3f LINE L1 -4752 598 99 1345 125 5 5 chr17 2940712 2940920 -86563633 - L1PA10 LINE L1 -15 6153 5946 1369 280 24 53 chr17 2940920 2941017 -86563536 - L1M3f LINE L1 -5251 99 1 21 0 0 0 chr17 2941028 2941049 -86563504 + AT_rich Low_complexity Low_complexity 1 21 0 1274 176 75 80 chr17 2941088 2941464 -86563089 + MLT1A2 LTR MaLR 1 374 0 189 107 0 0 chr17 2941561 2941589 -86562964 + (T)n Simple_repeat Simple_repeat 1 28 0 1521 120 4 41 chr17 2941617 2942568 -86561985 - L1PB1 LINE L1 0 6151 5236 304 284 197 0 chr17 2942719 2942846 -86561707 + MIR SINE MIR 41 192 -70 24 0 0 0 chr17 2944059 2944083 -86560470 + AT_rich Low_complexity Low_complexity 1 24 0 3516 195 127 11 chr17 2944283 2945340 -86559213 - Charlie1 DNA MER1_type -1 2760 1582 430 284 75 50 chr17 2945351 2946163 -86558390 - L1M4 LINE L1 -2212 3934 3103 494 148 10 0 chr17 2948537 2948638 -86555915 - L1PA16 LINE L1 0 6166 6065 311 330 165 21 chr17 2948643 2948831 -86555722 + MIR SINE MIR 47 261 -1 22 70 0 0 chr17 2949380 2949423 -86555130 + AT_rich Low_complexity Low_complexity 1 43 0 267 295 93 49 chr17 2949543 2949726 -86554827 - L2 LINE L2 -288 3025 2835 1689 194 0 0 chr17 2950167 2950461 -86554092 - AluJo SINE Alu -18 294 1 1870 152 3 3 chr17 2950493 2950783 -86553770 + AluJb SINE Alu 1 290 -22 1942 130 0 0 chr17 2951071 2951348 -86553205 - AluSx SINE Alu -21 291 15 21 36 0 0 chr17 2951358 2951386 -86553167 + AT_rich Low_complexity Low_complexity 1 28 0 13067 133 19 13 chr17 2951397 2953660 -86550893 - Tigger1 DNA MER2_type 0 2418 142 619 257 79 3 chr17 2953677 2953992 -86550561 + L1M4 LINE L1 2637 2975 -3171 850 88 0 0 chr17 2954006 2954131 -86550422 + L1PBa LINE L1 1 125 -6738 268 300 73 27 chr17 2954601 2954711 -86549842 + L2 LINE L2 3138 3252 -20 25 0 0 0 chr17 2955021 2955046 -86549507 + AT_rich Low_complexity Low_complexity 1 25 0 2063 127 7 0 chr17 2955046 2955338 -86549215 - AluSx SINE Alu -18 294 1 182 352 56 28 chr17 2956190 2956332 -86548221 + L3 LINE CR1 1420 1565 -12 219 272 124 53 chr17 2956916 2957085 -86547468 + MER5A DNA MER1_type 9 189 0 328 305 37 0 chr17 2957456 2957620 -86546933 - L1M4 LINE L1 -1034 5348 5179 351 324 101 47 chr17 2958281 2958559 -86545994 + L1MEd LINE L1 571 863 -5256 1177 261 109 49 chr17 2958573 2959384 -86545169 - L1ME3A LINE L1 -73 6097 5195 567 88 0 0 chr17 2959384 2959464 -86545089 + MADE1 DNA Mariner 1 80 0 1177 261 109 49 chr17 2959464 2959805 -86544748 - L1ME3A LINE L1 -975 5195 4876 1298 176 53 68 chr17 2959817 2960041 -86544512 - L1MA9 LINE L1 0 6312 6086 1661 197 0 7 chr17 2960041 2960330 -86544223 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr17 2960330 2960350 -86544203 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1298 176 53 68 chr17 2960350 2960504 -86544049 - L1MA9 LINE L1 -224 6088 5939 2297 149 96 2 chr17 2960520 2960997 -86543556 - L1MA2 LINE L1 0 6304 5783 6278 219 53 30 chr17 2961022 2961170 -86543383 - L1M1 LINE L1 -1822 5743 5600 2176 62 0 0 chr17 2961170 2961446 -86543107 - L1PA7 LINE L1 0 6154 5879 6278 219 53 30 chr17 2961446 2963240 -86541313 - L1M1 LINE L1 -1965 5600 3850 1546 173 66 36 chr17 2963240 2963604 -86540949 - THE1C LTR MaLR 0 375 1 8711 134 50 42 chr17 2963609 2965174 -86539379 - MSTA-int LTR MaLR 0 1580 3 1651 156 186 14 chr17 2965176 2965541 -86539012 - MSTA LTR MaLR 0 428 1 6278 219 53 30 chr17 2965541 2965791 -86538762 - L1M1 LINE L1 -3718 3847 3489 503 250 15 7 chr17 2965818 2965954 -86538599 - L1M4 LINE L1 -5861 452 316 917 174 15 55 chr17 2966010 2966211 -86538342 - AluJo SINE Alu 0 312 120 239 227 0 0 chr17 2966232 2966298 -86538255 - L1M1 LINE L1 -4185 3380 3315 4037 263 26 59 chr17 2966371 2967831 -86536722 - L1M1 LINE L1 -4868 2628 1217 3372 88 24 41 chr17 2967855 2968204 -86536349 - L1PB1 LINE L1 -1 6150 5812 180 0 0 0 chr17 2968204 2968224 -86536329 + (TG)n Simple_repeat Simple_repeat 2 21 0 3372 88 24 41 chr17 2968224 2968409 -86536144 - L1PB1 LINE L1 -339 5812 5625 336 293 198 6 chr17 3069561 3069728 -86434825 + MIR SINE MIR 64 262 0 2134 248 44 113 chr17 3070597 3072543 -86432010 + L1M4c LINE L1 739 2584 -3798 781 143 0 9 chr17 3072543 3072655 -86431898 + FLAM_C SINE Alu 11 121 -22 2134 248 44 113 chr17 3072655 3073121 -86431432 + L1M4c LINE L1 2584 3080 -3302 452 202 0 0 chr17 3073190 3073292 -86431261 - L1P LINE L1 -2736 3410 3309 1130 165 20 5 chr17 3073305 3073505 -86431048 + L1 LINE L1 4282 4484 -1898 20353 153 16 18 chr17 3073505 3074616 -86429937 + L1P3 LINE L1 208 1320 -5141 207 0 0 0 chr17 3074616 3074639 -86429914 + (CAA)n Simple_repeat Simple_repeat 2 24 0 20353 153 16 18 chr17 3074639 3077987 -86426566 + L1P3 LINE L1 1320 4721 -1740 904 128 61 4 chr17 3077964 3078130 -86426423 + L1MA4 LINE L1 6438 6606 -20 * 292 337 98 0 chr17 3078565 3078728 -86425825 - MIR SINE MIR -78 184 6 1113 144 17 0 chr17 3079285 3079458 -86425095 - AluSg/x SINE Alu 0 312 137 215 339 83 9 chr17 3079791 3079900 -86424653 + MIR SINE MIR 19 135 -73 222 237 17 17 chr17 3080071 3080130 -86424423 + GA-rich Low_complexity Low_complexity 5 63 0 2147 121 3 3 chr17 3080639 3080946 -86423607 + AluSx SINE Alu 1 307 -5 2360 245 91 29 chr17 3081365 3081976 -86422577 - L1ME3A LINE L1 -69 6170 5598 3305 184 59 3 chr17 3081976 3082617 -86421936 - L1MA4 LINE L1 0 6300 5624 2360 245 91 29 chr17 3082617 3083274 -86421279 - L1ME3A LINE L1 -641 5598 4817 1973 127 52 14 chr17 3083318 3083609 -86420944 - AluSx SINE Alu -10 302 1 1366 173 8 25 chr17 3083609 3083852 -86420701 + MLT1A1 LTR MaLR 127 365 0 663 292 97 23 chr17 3083881 3084501 -86420052 - L1ME3A LINE L1 -4921 1475 810 1821 166 0 0 chr17 3085389 3085673 -86418880 + AluSx SINE Alu 6 289 -23 461 385 48 20 chr17 3085904 3086299 -86418254 + L2 LINE L2 2572 2977 -337 2123 114 23 0 chr17 3086654 3086953 -86417600 + AluSx SINE Alu 1 306 -6 2426 120 61 79 chr17 3087535 3087907 -86416646 + Tigger2a DNA MER2_type 1 365 -2343 8945 25 16 246 chr17 3087907 3089700 -86414853 - SVA Other Other -5 1381 2 2426 120 61 79 chr17 3089700 3089769 -86414784 + Tigger2a DNA MER2_type 365 434 0 215 306 0 59 chr17 3089860 3089945 -86414608 - MIR SINE MIR -61 147 68 2312 107 0 0 chr17 3090286 3090586 -86413967 - AluSq SINE Alu -13 300 1 229 297 54 0 chr17 3090903 3090977 -86413576 - L2 LINE L2 -13 3300 3223 700 306 207 35 chr17 3091130 3091340 -86413213 - L2 LINE L2 -407 2907 2734 2471 80 0 6 chr17 3091340 3091654 -86412899 - AluSx SINE Alu 0 312 1 700 306 207 35 chr17 3091654 3092337 -86412216 - L2 LINE L2 -580 2734 1860 2009 129 14 0 chr17 3093733 3094028 -86410525 - AluSx SINE Alu -13 299 1 392 284 204 35 chr17 3094308 3094426 -86410127 - MIR SINE MIR -3 259 162 2224 112 0 0 chr17 3094426 3094744 -86409809 + AluSx SINE Alu 1 318 0 392 284 204 35 chr17 3094744 3094825 -86409728 - MIR SINE MIR -100 162 25 609 303 83 30 chr17 3095008 3095404 -86409149 - Charlie8 DNA MER1_type -27 2390 1974 2392 33 25 0 chr17 3095410 3095726 -86408827 - L1PA5 LINE L1 0 6154 5862 389 185 188 55 chr17 3095739 3095770 -86408783 + Zaphod DNA AcHobo 568 594 -3437 2385 81 0 3 chr17 3095770 3096067 -86408486 - AluSq SINE Alu -17 296 1 389 185 188 55 chr17 3096067 3096360 -86408193 + Zaphod DNA AcHobo 594 935 -3096 846 102 18 13 chr17 3096414 3096552 -86408001 - L1PA8 LINE L1 -6 6162 6022 * 9784 167 60 98 chr17 3096541 3097689 -86406864 - L1 LINE L1 -960 5186 3996 840 257 6 6 chr17 3097689 3097868 -86406685 + MER8 DNA MER2_type 1 179 -60 328 270 0 0 chr17 3097843 3097906 -86406647 + MER2 DNA MER2_type 282 344 -1 * 9784 167 60 98 chr17 3097906 3099259 -86405294 - L1 LINE L1 -2188 3958 2572 1882 134 7 37 chr17 3099484 3099783 -86404770 + AluSx SINE Alu 6 295 -17 2482 170 29 56 chr17 3100256 3100414 -86404139 + MER70A LTR ERVL 1 162 -310 2293 67 0 7 chr17 3100414 3100697 -86403856 + L1PA8 LINE L1 5892 6172 0 2482 170 29 56 chr17 3100697 3101021 -86403532 + MER70A LTR ERVL 162 470 -2 398 249 203 23 chr17 3101122 3101299 -86403254 - MIR SINE MIR -51 211 3 211 391 78 5 chr17 3101679 3101871 -86402682 - L2 LINE L2 -510 2804 2599 374 216 0 0 chr17 3103704 3103778 -86400775 + MER116 DNA Mariner 3 76 -4 479 312 53 70 chr17 3104085 3104441 -86400112 + L2 LINE L2 2431 2780 -534 524 310 114 63 chr17 3104489 3104902 -86399651 + L2 LINE L2 2817 3250 -22 1947 120 3 50 chr17 3105028 3105329 -86399224 - AluSx SINE Alu -25 287 1 2125 119 0 29 chr17 3105645 3105956 -86398597 - AluSx SINE Alu -10 302 1 312 287 111 59 chr17 3106049 3106394 -86398159 + L1M4 LINE L1 4799 5168 -978 2855 40 69 3 chr17 3106394 3106740 -86397813 + L1PA3 LINE L1 5787 6155 0 312 287 111 59 chr17 3106740 3106781 -86397772 + L1M4 LINE L1 5168 5205 -941 209 338 40 0 chr17 3106901 3106975 -86397578 - MIR SINE MIR -166 96 20 1853 133 0 58 chr17 3107209 3107518 -86397035 - AluSx SINE Alu -16 296 6 574 55 0 0 chr17 3108983 3109056 -86395497 + Alu SINE Alu 2 74 -236 937 201 26 0 chr17 3159095 3159284 -86345269 + MLT1A1 LTR MaLR 171 364 -1 188 395 18 30 chr17 3159285 3159452 -86345101 + L2 LINE L2 2475 2639 -675 712 202 40 0 chr17 3159512 3159685 -86344868 - L1MA4 LINE L1 -4 6296 6117 728 325 41 14 chr17 3159740 3160085 -86344468 + L2 LINE L2 2077 2430 -884 757 231 78 0 chr17 3160106 3160362 -86344191 + MLT1A1 LTR MaLR 2 277 -88 1984 114 7 37 chr17 3161962 3162260 -86342293 - AluSq SINE Alu -24 289 1 2275 169 19 2 chr17 3162260 3162679 -86341874 - L1MA5 LINE L1 -258 6042 5617 348 273 69 18 chr17 3162688 3163021 -86341532 - L1 LINE L1 -1593 4553 4204 462 154 22 0 chr17 3163125 3163216 -86341337 + L1ME2 LINE L1 5880 5972 -192 613 158 0 0 chr17 3163266 3163361 -86341192 - AluS SINE Alu -217 95 1 445 281 31 23 chr17 3163374 3163634 -86340919 - L1 LINE L1 -2145 4001 3740 1866 119 43 12 chr17 3163945 3164273 -86340280 - L1MA4 LINE L1 -6 6294 5957 685 325 31 7 chr17 3164784 3165199 -86339354 - HAL1b LINE L1 -703 645 221 585 147 9 0 chr17 3166642 3166751 -86337802 - L1MA9 LINE L1 -349 5963 5854 680 145 69 19 chr17 3166754 3166913 -86337640 + L1MA7 LINE L1 6124 6290 -1 1732 65 24 116 chr17 3166979 3167271 -86337282 - AluYb8 SINE Alu -8 310 46 1144 73 0 0 chr17 3167271 3167407 -86337146 - AluSq/x SINE Alu -177 136 1 662 162 9 0 chr17 3167437 3167582 -86336971 + AluSg/x SINE Alu 182 327 0 1026 70 7 0 chr17 3167637 3167791 -86336762 - L1P4 LINE L1 -489 5672 5512 10249 170 5 13 chr17 3167851 3169884 -86334669 + L1P LINE L1 2976 4992 -1154 1462 241 48 95 chr17 3169880 3170308 -86334245 + L1M4 LINE L1 4098 4545 -1601 * 6380 73 18 14 chr17 3170308 3171719 -86332834 + L1PA10 LINE L1 4724 6168 0 1462 241 48 95 chr17 3171719 3172081 -86332472 + L1M4 LINE L1 4545 4923 -1223 351 0 0 0 chr17 3172081 3172120 -86332433 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 680 13 0 0 chr17 3172120 3172199 -86332354 - L1PA2 LINE L1 -11 6144 6066 1462 241 48 95 chr17 3172199 3172370 -86332183 + L1M4 LINE L1 4921 5015 -1131 313 349 50 26 chr17 3172595 3173051 -86331502 + MERVL LTR ERVL 4867 5333 -152 951 60 51 31 chr17 3174292 3174614 -86329939 + (TCTA)n Simple_repeat Simple_repeat 1 328 0 1566 172 23 10 chr17 3174632 3174940 -86329613 - MLT2D LTR ERVL -48 366 55 3340 55 23 5 chr17 3174940 3175380 -86329173 + L1PA8 LINE L1 5725 6172 0 851 347 90 53 chr17 3175788 3176808 -86327745 - L2 LINE L2 -11 3261 2200 2141 136 10 7 chr17 3176808 3177300 -86327253 - AluSx SINE Alu 0 312 1 851 347 90 53 chr17 3177300 3177561 -86326992 - L2 LINE L2 -1072 2200 1950 22 0 0 0 chr17 3179048 3179070 -86325483 + AT_rich Low_complexity Low_complexity 1 22 0 1937 168 0 3 chr17 3179070 3179380 -86325173 - AluJo SINE Alu -3 309 1 1890 112 12 0 chr17 3179390 3179668 -86324885 - AluSg SINE Alu 0 310 28 2409 84 3 0 chr17 3180016 3180324 -86324229 + AluY SINE Alu 1 309 -2 1026 70 7 0 chr17 3180564 3180718 -86323835 + L1P3 LINE L1 5512 5672 -489 288 0 0 0 chr17 3180773 3180805 -86323748 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1807 99 3 127 chr17 3180807 3181139 -86323414 - AluSx SINE Alu -17 295 5 384 349 34 19 chr17 3181164 3181433 -86323120 + L2 LINE L2 2174 2446 -868 286 187 0 27 chr17 3181889 3181964 -86322589 + L1M4 LINE L1 4577 4649 -1497 26 0 0 0 chr17 3182314 3182340 -86322213 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr17 3182508 3182535 -86322018 + AT_rich Low_complexity Low_complexity 1 27 0 350 273 53 17 chr17 3182605 3182773 -86321780 + L1M4 LINE L1 5197 5367 -779 2034 145 0 0 chr17 3182823 3183159 -86321394 + AluSx SINE Alu 1 336 0 976 233 44 28 chr17 3183271 3183708 -86320845 - L1ME2 LINE L1 -88 6076 4829 913 42 42 0 chr17 3183708 3183827 -86320726 - L1PA13 LINE L1 -3 6160 6037 379 226 24 24 chr17 3183837 3183969 -86320584 - L1ME1 LINE L1 -339 5827 5701 547 83 42 0 chr17 3184011 3184107 -86320446 - L1PA13 LINE L1 -121 6042 5943 * 3348 170 16 12 chr17 3184096 3184768 -86319785 + L1P LINE L1 4324 4998 -1148 254 169 113 0 chr17 3184748 3184819 -86319734 - L1ME2 LINE L1 -1285 4861 4783 * 318 281 39 59 chr17 3185087 3185290 -86319263 - HAL1b LINE L1 -654 694 496 29 70 0 0 chr17 3185655 3185712 -86318841 + AT_rich Low_complexity Low_complexity 1 57 0 305 212 42 76 chr17 3185967 3186085 -86318468 - L1MC4 LINE L1 -138 7904 7791 2296 240 83 11 chr17 3186773 3187519 -86317034 - L1ME2 LINE L1 0 6164 5365 2166 110 7 10 chr17 3187776 3188077 -86316476 - AluSx SINE Alu -12 300 1 324 352 83 26 chr17 3188095 3188359 -86316194 + L1ME3 LINE L1 5688 5966 -196 1985 118 3 20 chr17 3188653 3188958 -86315595 + AluSx SINE Alu 1 300 -12 612 206 168 29 chr17 3190479 3190688 -86313865 + MIR SINE MIR 7 244 -18 234 82 68 41 chr17 3190694 3190767 -86313786 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 26 0 0 0 chr17 3190992 3191018 -86313535 + AT_rich Low_complexity Low_complexity 1 26 0 2394 59 3 20 chr17 3191386 3191692 -86312861 - AluY SINE Alu -10 301 1 195 25 75 25 chr17 3191824 3191864 -86312689 + A-rich Low_complexity Low_complexity 4 45 0 526 253 126 16 chr17 3192096 3192278 -86312275 + L2 LINE L2 3112 3313 0 653 232 41 5 chr17 3193623 3193817 -86310736 + L1MA9 LINE L1 6073 6273 -39 1942 127 22 0 chr17 3193974 3194250 -86310303 + AluSx SINE Alu 1 310 0 253 0 0 0 chr17 3194250 3194278 -86310275 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 2614 37 0 3 chr17 3194736 3195034 -86309519 - AluY SINE Alu -14 297 1 529 213 7 85 chr17 3195583 3195698 -86308855 + MER5B DNA MER1_type 10 114 -64 2497 57 0 7 chr17 3195698 3195995 -86308558 - AluSc SINE Alu -13 296 2 529 213 7 85 chr17 3195995 3196020 -86308533 + MER5B DNA MER1_type 114 139 -39 631 239 6 44 chr17 3196284 3196443 -86308110 - MER5B DNA MER1_type -20 158 6 1983 99 32 7 chr17 3196597 3196879 -86307674 + AluY SINE Alu 1 289 -22 202 337 22 11 chr17 3197030 3197119 -86307434 + L3 LINE CR1 1483 1572 -5 269 94 47 16 chr17 3197446 3197510 -86307043 + CT-rich Low_complexity Low_complexity 1 66 0 2353 91 3 0 chr17 3197691 3197988 -86306565 - AluSp SINE Alu -15 298 1 348 275 69 30 chr17 3199777 3199908 -86304645 + MIR SINE MIR 61 196 -66 1829 171 7 3 chr17 3199970 3200275 -86304278 + AluJb SINE Alu 1 306 -6 7402 54 30 0 chr17 3200381 3201541 -86303012 - L1PA7 LINE L1 0 6154 4991 268 171 184 40 chr17 3201541 3201617 -86302936 + MLT1E2 LTR MaLR 3 89 -537 419 192 0 7 chr17 3201618 3201721 -86302832 - L1PB4 LINE L1 -68 6086 5987 * 758 213 11 32 chr17 3201712 3201900 -86302653 - L1PB4 LINE L1 -35 6121 5938 * 1238 227 64 24 chr17 3201894 3202269 -86302284 - L1ME LINE L1 -5230 840 451 28 0 0 0 chr17 3202327 3202355 -86302198 + AT_rich Low_complexity Low_complexity 1 28 0 264 100 0 0 chr17 3202710 3202750 -86301803 + (A)n Simple_repeat Simple_repeat 1 40 0 300 258 16 0 chr17 3202784 3202846 -86301707 + Tigger3(Golem) DNA MER2_type 1 63 -2966 855 127 19 83 chr17 3202859 3203016 -86301537 + Tigger3(Golem) DNA MER2_type 2882 3028 -1 525 259 77 79 chr17 3203017 3203458 -86301095 + L1ME LINE L1 5379 5818 -303 237 98 0 0 chr17 3203550 3203591 -86300962 + (TG)n Simple_repeat Simple_repeat 2 42 0 184 79 79 0 chr17 3205600 3205638 -86298915 + T-rich Low_complexity Low_complexity 2 42 0 3472 83 7 2 chr17 3208151 3208596 -86295957 + L1PA10 LINE L1 5722 6168 0 22 0 0 0 chr17 3208633 3208655 -86295898 + AT_rich Low_complexity Low_complexity 1 22 0 770 286 64 75 chr17 3208884 3209707 -86294846 + HAL1b LINE L1 98 911 -437 308 246 16 82 chr17 3209752 3209874 -86294679 + HAL1b LINE L1 794 907 -441 441 293 145 40 chr17 3210521 3210920 -86293633 + L1M4 LINE L1 2680 3120 -3026 187 318 118 0 chr17 3213030 3213115 -86291438 + MIR SINE MIR 58 152 -56 415 301 34 0 chr17 3214202 3214348 -86290205 + MIR SINE MIR 64 214 -48 462 316 7 0 chr17 3214419 3214555 -86289998 - MIR SINE MIR -75 187 51 2271 107 0 0 chr17 3214742 3215040 -86289513 + AluSx SINE Alu 1 298 -14 7933 40 5 0 chr17 3215154 3216352 -86288201 - L1PA5 LINE L1 0 6154 4957 5004 36 24 36 chr17 3216352 3217010 -86287543 + L1PA5 LINE L1 4309 4958 -1188 336 278 128 0 chr17 3217006 3217139 -86287414 + L1ME2 LINE L1 5511 5660 -502 * 494 332 80 27 chr17 3217395 3217922 -86286631 + L1M4 LINE L1 4733 5287 -859 2229 118 0 16 chr17 3217924 3218230 -86286323 + AluSc SINE Alu 1 301 -8 1070 106 0 0 chr17 3218238 3218379 -86286174 + AluSg/x SINE Alu 154 294 -18 248 70 23 0 chr17 3218382 3218425 -86286128 + (TA)n Simple_repeat Simple_repeat 2 45 0 204 120 40 20 chr17 3218442 3218492 -86286061 + (TA)n Simple_repeat Simple_repeat 1 51 0 893 247 151 49 chr17 3218576 3219107 -86285446 - L1MEc LINE L1 -5781 615 31 1475 224 71 6 chr17 3219256 3219608 -86284945 + L1ME2 LINE L1 5769 6143 -21 299 248 78 43 chr17 3220325 3220466 -86284087 + L2 LINE L2 3168 3313 0 1562 182 36 0 chr17 3220634 3220914 -86283639 - AluJo SINE Alu -22 290 1 236 331 88 11 chr17 3222963 3223144 -86281409 - L2 LINE L2 -791 2523 2329 2253 95 0 0 chr17 3223375 3223685 -86280868 - AluSx SINE Alu 0 310 1 2087 126 3 0 chr17 3227110 3227404 -86277149 - AluSx SINE Alu -17 295 1 227 390 70 0 chr17 3228244 3228344 -86276209 + L2 LINE L2 3141 3247 -25 23 68 0 0 chr17 3228846 3228890 -86275663 + AT_rich Low_complexity Low_complexity 1 44 0 5927 139 30 0 chr17 3229169 3230182 -86274371 - L1PA16 LINE L1 -3 6163 5131 192 226 274 0 chr17 3231133 3231195 -86273358 - MIR SINE MIR -107 155 77 511 262 16 40 chr17 3231957 3232155 -86272398 + MIR SINE MIR 10 200 -54 318 258 262 40 chr17 3233153 3233428 -86271125 - L1MC/D LINE L1 -496 5625 5408 369 221 26 0 chr17 3233717 3233794 -86270759 - MER58 DNA MER1_type -1 2419 2341 33 0 0 0 chr17 3233803 3233836 -86270717 + AT_rich Low_complexity Low_complexity 1 33 0 39276 38 5 1 chr17 3233839 3239319 -86265234 - L1PA4 LINE L1 0 6155 656 373 286 117 35 chr17 3239354 3239637 -86264916 - L1MC/D LINE L1 -896 5250 4945 2338 102 0 3 chr17 3239670 3239973 -86264580 - AluSx SINE Alu -10 302 1 262 114 0 0 chr17 3240160 3240195 -86264358 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 3240240 3240794 -86263759 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 3240796 3240867 -86263686 + L1P4 LINE L1 5017 5087 -1059 1198 28 0 14 chr17 3240868 3241010 -86263543 + MER11A LTR ERVK 1 140 -1126 13748 31 1 0 chr17 3241018 3243332 -86261221 - L1PA2 LINE L1 -2 6153 3838 22201 40 24 2 chr17 3243333 3247186 -86257367 - L1P LINE L1 -2157 3989 2 4256 127 30 33 chr17 3247186 3248155 -86256398 + MER11A LTR ERVK 119 1266 0 2796 85 3 2 chr17 3248155 3248692 -86255861 + L1P4 LINE L1 5083 5619 -549 266 161 107 0 chr17 3248684 3248740 -86255813 - L1MB4 LINE L1 -36 6144 6083 * 1393 144 21 20 chr17 3248712 3248992 -86255561 - L1MA4 LINE L1 -243 6054 5772 409 290 38 8 chr17 3249111 3249242 -86255311 - L1M4 LINE L1 -1533 4613 4479 331 345 98 0 chr17 3249480 3249674 -86254879 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 3249970 3249999 -86254554 + AT_rich Low_complexity Low_complexity 1 29 0 312 244 35 35 chr17 3250123 3250209 -86254344 - MIR SINE MIR -53 209 124 760 129 23 0 chr17 3251595 3251727 -86252826 - L1MB3 LINE L1 -2 6181 6047 39333 81 12 7 chr17 3251742 3257854 -86246699 - L1PA5 LINE L1 -8 6146 12 334 235 81 78 chr17 3258591 3258617 -86245936 + MLT1K LTR MaLR 32 56 -532 2083 196 112 39 chr17 3258617 3259128 -86245425 + LTR55 LTR ERV 1 548 0 334 235 81 78 chr17 3259128 3259337 -86245216 + MLT1K LTR MaLR 56 298 -290 370 244 0 0 chr17 3259396 3259478 -86245075 - MLT1K LTR MaLR -138 450 369 955 261 127 54 chr17 3259647 3260409 -86244144 + HAL1 LINE L1 637 1454 -1053 243 284 26 32 chr17 3260464 3260587 -86243966 + L1ME LINE L1 3 126 -5944 714 99 18 9 chr17 3260606 3260717 -86243836 - L1MA7 LINE L1 -409 5882 5771 642 137 10 0 chr17 3260717 3260819 -86243734 - L1MA2 LINE L1 0 6304 6202 230 265 0 44 chr17 3260821 3260889 -86243664 + MLT1K LTR MaLR 217 281 -307 4334 116 22 22 chr17 3260966 3261655 -86242898 - L1MA2 LINE L1 -107 6197 5509 434 37 0 0 chr17 3261657 3261711 -86242842 - L1MA2 LINE L1 -895 5407 5354 8101 32 0 0 chr17 3261711 3262854 -86241699 - L1PA3 LINE L1 0 6155 5013 30731 35 1 0 chr17 3262854 3266511 -86238042 + L1PA3 LINE L1 1344 5001 -1145 8039 195 31 83 chr17 3266513 3268141 -86236412 - L1 LINE L1 -783 6782 5072 1843 106 44 7 chr17 3268141 3268414 -86236139 - L1MA1 LINE L1 0 6302 6020 8039 195 31 83 chr17 3268414 3268778 -86235775 - L1 LINE L1 -2493 5072 4691 489 211 11 0 chr17 3268778 3268868 -86235685 - AluJb SINE Alu -11 301 211 8039 195 31 83 chr17 3268868 3269895 -86234658 - L1 LINE L1 -2874 4691 3970 261 0 0 0 chr17 3269895 3269924 -86234629 + (TC)n Simple_repeat Simple_repeat 2 30 0 8039 195 31 83 chr17 3269924 3270954 -86233599 - L1 LINE L1 -3595 3970 2889 316 167 11 67 chr17 3270969 3271059 -86233494 + L1M4 LINE L1 3398 3482 -2664 258 274 49 55 chr17 3271863 3272027 -86232526 + L1MC1 LINE L1 5837 5999 -334 * 1495 149 15 8 chr17 3271909 3272171 -86232382 + L1MB3 LINE L1 5881 6144 -39 811 152 0 30 chr17 3272176 3272308 -86232245 - AluJo SINE Alu -176 136 9 322 302 0 0 chr17 3272601 3272707 -86231846 + L1M4 LINE L1 3465 3570 -2576 6734 206 9 7 chr17 3272712 3274156 -86230397 - L1P LINE L1 -2972 3174 1728 * 20845 40 1 1 chr17 3274151 3277163 -86227390 - L1PA5 LINE L1 -271 5883 2870 6280 142 21 16 chr17 3277139 3278146 -86226407 - MSTA-int LTR MaLR -566 1014 3 * 1961 143 178 22 chr17 3278148 3278518 -86226035 - MSTA LTR MaLR 0 428 1 1813 153 54 15 chr17 3278680 3279014 -86225539 - L1MA7 LINE L1 0 6291 5945 1950 134 62 3 chr17 3279014 3279321 -86225232 + L1M2 LINE L1 5434 5758 -533 429 287 71 71 chr17 3279932 3280214 -86224339 - MLT1I LTR MaLR 0 409 128 254 216 67 97 chr17 3280272 3280406 -86224147 - LTR67 LTR ERVL -17 540 411 312 333 8 17 chr17 3281342 3281462 -86223091 - MLT1L LTR MaLR -355 260 142 192 233 0 0 chr17 3281619 3281662 -86222891 + MIR SINE MIR 61 103 -159 10899 198 44 79 chr17 3281678 3282051 -86222502 - L1PB2 LINE L1 -2 6865 6481 225 232 0 0 chr17 3282051 3282107 -86222446 + LTR66 LTR ERVL 398 453 -157 10899 198 44 79 chr17 3282107 3284274 -86220279 - L1PB2 LINE L1 -386 6481 4241 1981 141 7 3 chr17 3284274 3284573 -86219980 - AluJb SINE Alu -12 300 1 10899 198 44 79 chr17 3284573 3285105 -86219448 - L1PB2 LINE L1 -2626 4241 3692 6207 60 21 57 chr17 3285105 3287289 -86217264 - SVA Other Other -518 1379 54 875 34 26 0 chr17 3287289 3287406 -86217147 + (GGGAGA)n Simple_repeat Simple_repeat 4 123 0 10899 198 44 79 chr17 3287406 3289210 -86215343 - L1PB2 LINE L1 -3174 3693 1828 2268 96 0 0 chr17 3289210 3289503 -86215050 - L1PB1 LINE L1 -1 6150 5858 10899 198 44 79 chr17 3289503 3289657 -86214896 - L1PB2 LINE L1 -5039 1828 1670 320 77 39 0 chr17 3289657 3289709 -86214844 - Alu SINE Alu 0 302 249 10899 198 44 79 chr17 3289709 3289801 -86214752 - L1PB2 LINE L1 -5197 1670 1576 2070 139 10 0 chr17 3289801 3290104 -86214449 - AluSx SINE Alu -6 306 1 10899 198 44 79 chr17 3290104 3291760 -86212793 - L1PB2 LINE L1 -5291 1576 1 409 275 107 0 chr17 3291772 3291903 -86212650 + MIR SINE MIR 117 261 -1 980 244 14 3 chr17 3292217 3292470 -86212083 + L1ME LINE L1 5419 5669 -493 2410 187 120 21 chr17 3292539 3293192 -86211361 - MER52A LTR ERV1 -955 800 4 313 294 24 0 chr17 3293439 3293524 -86211029 - MIR3 SINE MIR -45 163 77 21 0 0 0 chr17 3295817 3295838 -86208715 + AT_rich Low_complexity Low_complexity 1 21 0 200 261 58 0 chr17 3296118 3296187 -86208366 - MIR SINE MIR -93 169 97 297 303 42 34 chr17 3296229 3296348 -86208205 + L2 LINE L2 2953 3072 -200 246 312 21 64 chr17 3297181 3297322 -86207231 + L2 LINE L2 2933 3067 -205 656 292 88 22 chr17 3297539 3297813 -86206740 + L3 LINE CR1 1137 1428 -149 414 258 207 23 chr17 3297857 3298075 -86206478 - MIR SINE MIR -6 256 3 34 84 0 0 chr17 3298409 3298492 -86206061 + AT_rich Low_complexity Low_complexity 1 83 0 967 193 63 19 chr17 3299145 3299352 -86205201 + MER58A DNA MER1_type 1 216 -8 2359 59 3 11 chr17 3299353 3299663 -86204890 + AluSp SINE Alu 1 308 0 244 118 55 47 chr17 3299813 3299940 -86204613 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 606 206 168 29 chr17 3299946 3300155 -86204398 - MIR SINE MIR -18 244 7 21 0 0 0 chr17 3301062 3301083 -86203470 + GC_rich Low_complexity Low_complexity 1 21 0 1992 118 3 20 chr17 3301677 3301982 -86202571 - AluSx SINE Alu -12 300 1 2253 106 0 10 chr17 3302558 3302861 -86201692 + AluSx SINE Alu 1 300 -12 2594 241 92 13 chr17 3303073 3303864 -86200689 + L1ME2 LINE L1 5311 6164 0 263 212 42 76 chr17 3304552 3304670 -86199883 + L1MC4 LINE L1 7791 7904 -138 29 70 0 0 chr17 3304925 3304982 -86199571 + AT_rich Low_complexity Low_complexity 1 57 0 373 267 81 59 chr17 3305332 3305568 -86198985 + HAL1b LINE L1 476 716 -632 288 169 113 0 chr17 3305818 3305889 -86198664 + L1ME2 LINE L1 4783 4861 -1285 * 3658 164 19 15 chr17 3305869 3306541 -86198012 - L1P LINE L1 -1148 4998 4324 584 118 43 14 chr17 3306530 3306661 -86197892 + L1PA13 LINE L1 5943 6072 -93 * 435 225 78 35 chr17 3306668 3306810 -86197743 + L1ME2 LINE L1 5701 5848 -316 980 42 42 0 chr17 3306810 3306929 -86197624 + L1PA13 LINE L1 6037 6160 -3 1128 227 50 35 chr17 3306929 3307366 -86197187 + L1ME2 LINE L1 4829 6076 -88 2022 145 0 0 chr17 3307478 3307814 -86196739 - AluSx SINE Alu 0 336 1 342 273 53 17 chr17 3307864 3308032 -86196521 - L1M4 LINE L1 -779 5367 5197 27 0 0 0 chr17 3308102 3308129 -86196424 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr17 3308297 3308323 -86196230 + AT_rich Low_complexity Low_complexity 1 26 0 282 274 88 49 chr17 3308442 3308748 -86195805 - L1M4 LINE L1 -1252 4894 4577 378 346 34 19 chr17 3309204 3309473 -86195080 - L2 LINE L2 -868 2446 2174 1811 99 3 127 chr17 3309498 3309861 -86194692 + AluSx SINE Alu 5 326 0 1100 70 7 0 chr17 3309916 3310070 -86194483 - L1P4 LINE L1 -489 5672 5512 2430 81 3 0 chr17 3310310 3310618 -86193935 - AluY SINE Alu -2 309 1 1887 112 12 0 chr17 3310966 3311244 -86193309 + AluSg SINE Alu 28 310 0 1918 168 0 3 chr17 3311254 3311564 -86192989 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 3311564 3311586 -86192967 + AT_rich Low_complexity Low_complexity 1 22 0 736 339 85 60 chr17 3313073 3313334 -86191219 + L2 LINE L2 1950 2203 -1069 2122 136 10 7 chr17 3313334 3313826 -86190727 + AluSx SINE Alu 1 312 0 736 339 85 60 chr17 3313826 3314850 -86189703 + L2 LINE L2 2203 3261 -11 3574 55 23 5 chr17 3315258 3315698 -86188855 - L1PA8 LINE L1 0 6172 5725 1705 172 23 10 chr17 3315698 3316006 -86188547 + MLT2D LTR ERVL 55 366 -48 951 60 51 31 chr17 3316024 3316346 -86188207 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 1894 242 53 84 chr17 3318268 3318423 -86186130 - L1M4 LINE L1 -1131 5015 4857 728 53 21 21 chr17 3318423 3318557 -86185996 + L1PA2 LINE L1 6050 6183 0 1894 242 53 84 chr17 3318557 3318919 -86185634 - L1M4 LINE L1 -1289 4857 4485 6859 73 63 0 chr17 3318919 3320330 -86184223 - L1PA10 LINE L1 0 6168 4724 1894 242 53 84 chr17 3320330 3320758 -86183795 - L1M4 LINE L1 -1661 4485 4098 * 11904 172 7 18 chr17 3320754 3322813 -86181740 - L1P LINE L1 -1154 4992 2957 2046 115 11 3 chr17 3322813 3323099 -86181454 - AluSx SINE Alu -22 290 3 11904 172 7 18 chr17 3323099 3323257 -86181296 - L1P LINE L1 -3189 2957 2799 969 134 15 0 chr17 3323754 3323888 -86180665 + AluJo SINE Alu 1 136 -176 300 179 0 0 chr17 3323892 3323948 -86180605 - L1P LINE L1 -2085 4061 4006 778 156 170 7 chr17 3323967 3324102 -86180451 + AluJo SINE Alu 134 290 -22 246 62 0 0 chr17 3324357 3324389 -86180164 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 86 3 0 chr17 3324613 3324904 -86179649 - AluSp SINE Alu -21 292 1 349 270 79 53 chr17 3325292 3325444 -86179109 - MIR SINE MIR -43 219 64 1957 83 0 30 chr17 3325932 3326198 -86178355 + AluY SINE Alu 49 306 -5 251 273 13 0 chr17 3327686 3327763 -86176790 + GA-rich Low_complexity Low_complexity 1 78 0 2322 86 3 29 chr17 3328033 3328347 -86176206 + AluSg SINE Alu 5 310 0 191 269 30 30 chr17 3328358 3328425 -86176128 - L3 LINE CR1 -28 1549 1483 2249 82 0 7 chr17 3328576 3328867 -86175686 - AluY SINE Alu -22 289 1 260 192 39 0 chr17 3328872 3328924 -86175629 + MER5B DNA MER1_type 125 178 0 24 53 0 0 chr17 3329379 3329417 -86175136 + AT_rich Low_complexity Low_complexity 1 38 0 2452 88 0 0 chr17 3329775 3330083 -86174470 + AluSq SINE Alu 1 308 -5 546 253 67 108 chr17 3330089 3330295 -86174258 - L1M4 LINE L1 -1945 4201 3988 378 0 0 0 chr17 3330295 3330337 -86174216 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1775 144 0 11 chr17 3330342 3330605 -86173948 - AluSx SINE Alu -52 260 1 546 253 67 108 chr17 3330605 3330883 -86173670 - L1M4 LINE L1 -2162 3984 3731 2033 119 43 12 chr17 3331189 3331517 -86173036 - L1MA4 LINE L1 -6 6294 5957 797 318 41 11 chr17 3332014 3332454 -86172099 - HAL1b LINE L1 -689 659 207 634 147 9 0 chr17 3333886 3333995 -86170558 - L1MA9 LINE L1 -349 5963 5854 764 145 69 19 chr17 3333998 3334157 -86170396 + L1MA7 LINE L1 6124 6290 -1 2138 63 21 102 chr17 3334223 3334558 -86169995 - AluYb8 SINE Alu -8 310 3 772 223 36 72 chr17 3334608 3334859 -86169694 - L1MA9 LINE L1 -5 6286 6045 568 250 96 14 chr17 3336183 3336391 -86168162 - L2 LINE L2 0 3313 3089 269 297 48 41 chr17 3337556 3337701 -86166852 + MIR3 SINE MIR 31 176 -32 2318 93 0 37 chr17 3338144 3338467 -86166086 + AluSq SINE Alu 1 311 -2 369 301 41 67 chr17 3338622 3338967 -86165586 - L1ME LINE L1 -303 5818 5483 33 66 0 0 chr17 3339017 3339078 -86165475 + AT_rich Low_complexity Low_complexity 1 61 0 320 304 112 0 chr17 3339086 3339211 -86165342 - MIR SINE MIR -12 250 112 362 52 86 35 chr17 3339313 3339371 -86165182 - L1PA15 LINE L1 -3 6162 6102 4979 100 4 1 chr17 3339414 3340093 -86164460 - L1PA13 LINE L1 -49 6114 5434 12220 90 9 0 chr17 3340096 3341668 -86162885 - HERVL LTR ERVL -3328 2326 740 5767 87 10 33 chr17 3341673 3342158 -86162395 + L1PA10 LINE L1 5361 5821 -347 2086 101 11 0 chr17 3342158 3342436 -86162117 - AluSx SINE Alu -22 290 10 5767 87 10 33 chr17 3342436 3342774 -86161779 + L1PA10 LINE L1 5821 6165 -3 * 11353 163 41 18 chr17 3342756 3346042 -86158511 + L1MA5 LINE L1 2929 6290 -10 5138 30 0 0 chr17 3346269 3346866 -86157687 + L1PA3 LINE L1 5556 6152 -3 30 27 0 0 chr17 3347093 3347130 -86157423 + AT_rich Low_complexity Low_complexity 1 37 0 1214 330 96 53 chr17 3348517 3349230 -86155323 + L2 LINE L2 1907 2587 -685 2576 58 0 0 chr17 3349230 3349539 -86155014 - AluY SINE Alu -2 309 1 1214 330 96 53 chr17 3349539 3349835 -86154718 + L2 LINE L2 2587 2869 -403 2474 74 7 3 chr17 3349835 3350145 -86154408 - AluY SINE Alu 0 311 1 1214 330 96 53 chr17 3350145 3350430 -86154123 + L2 LINE L2 2869 3261 -11 2285 99 0 3 chr17 3350465 3350768 -86153785 - AluSp SINE Alu -11 302 1 521 207 131 77 chr17 3351512 3351709 -86152844 - MER5A DNA MER1_type 0 189 14 310 263 153 25 chr17 3351732 3351850 -86152703 + MER5B DNA MER1_type 46 178 0 211 365 22 62 chr17 3352430 3352704 -86151849 - L2 LINE L2 -358 2956 2694 627 301 10 5 chr17 3353195 3353401 -86151152 - ERVL LTR ERVL -617 5147 4941 585 305 10 5 chr17 3353944 3354141 -86150412 - ERVL LTR ERVL -858 4906 4709 327 280 11 21 chr17 3354152 3354245 -86150308 + L2 LINE L2 3221 3312 -1 383 321 18 14 chr17 3354247 3354468 -86150085 - L1M4 LINE L1 -2004 4142 3921 2724 239 65 21 chr17 3355615 3356661 -86147892 + L1ME3A LINE L1 5088 6165 -5 198 200 0 0 chr17 3356720 3356760 -86147793 - L2 LINE L2 -13 3300 3261 * 465 322 83 10 chr17 3356726 3356931 -86147622 - MIR SINE MIR -13 249 30 471 351 40 68 chr17 3357096 3357523 -86147030 + L2 LINE L2 2832 3246 -26 181 206 0 0 chr17 3357493 3357527 -86147026 + MIR SINE MIR 213 246 -16 * 262 284 11 34 chr17 3358141 3358229 -86146324 + MIR3 SINE MIR 14 99 -109 974 182 34 62 chr17 3358251 3358542 -86146011 - L1MA9 LINE L1 -38 6274 5992 193 391 11 11 chr17 3358542 3358634 -86145919 + MIR SINE MIR 91 182 -80 337 215 126 22 chr17 3359066 3359201 -86145352 + MLT1K LTR MaLR 374 522 -66 809 200 12 0 chr17 3359971 3360136 -86144417 + MLT1E2 LTR MaLR 460 626 0 192 158 0 0 chr17 3360287 3360325 -86144228 + (TA)n Simple_repeat Simple_repeat 1 38 0 1163 154 72 16 chr17 3360351 3360779 -86143774 - MLT1D LTR MaLR 0 505 10 268 226 19 0 chr17 3360774 3360827 -86143726 - MLT1D LTR MaLR -451 54 1 * 186 43 0 0 chr17 3361336 3361359 -86143194 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 496 299 102 39 chr17 3361475 3361729 -86142824 - L2 LINE L2 0 3313 3044 314 289 136 34 chr17 3362143 3362481 -86142072 - LTR33 LTR ERVL -130 393 22 188 384 89 7 chr17 3362583 3362729 -86141824 - L2 LINE L2 -352 2962 2805 901 188 41 64 chr17 3362758 3362976 -86141577 + MER58A DNA MER1_type 12 224 0 350 262 108 8 chr17 3363794 3363946 -86140607 - MIR SINE MIR -58 150 25 1958 157 3 3 chr17 3364356 3364656 -86139897 - AluJb SINE Alu -12 300 1 695 187 251 12 chr17 3364779 3365030 -86139523 - MER69 DNA AcHobo 0 2526 2216 518 200 20 0 chr17 3365046 3365146 -86139407 - AluJo SINE Alu -90 222 121 433 162 27 18 chr17 3365146 3365257 -86139296 - MER69 DNA AcHobo -314 2212 2101 1524 134 4 0 chr17 3365274 3365513 -86139040 - Tigger1 DNA MER2_type -2177 241 2 5437 219 51 73 chr17 3365520 3366171 -86138382 + L1M4c LINE L1 2420 3084 -3298 2374 97 0 10 chr17 3366171 3366481 -86138072 + AluSc SINE Alu 2 308 -1 5437 219 51 73 chr17 3366481 3366815 -86137738 + L1M4c LINE L1 3084 3424 -2958 2382 80 3 0 chr17 3366815 3367114 -86137439 + AluSc SINE Alu 1 300 -9 5437 219 51 73 chr17 3367114 3368133 -86136420 + L1M4c LINE L1 3424 4355 -2027 1215 190 31 0 chr17 3368133 3368359 -86136194 + MER46A DNA MER2_type 1 233 -3 5437 219 51 73 chr17 3368359 3368780 -86135773 + L1M4c LINE L1 4355 4784 -1598 8994 20 6 0 chr17 3368803 3370627 -86133926 - L1PA3 LINE L1 0 6155 4325 11481 133 91 5 chr17 3370627 3373064 -86131489 + L1MA9 LINE L1 3065 5800 -512 2065 100 16 53 chr17 3373064 3373384 -86131169 + AluSq SINE Alu 1 308 -5 11481 133 91 5 chr17 3373384 3373908 -86130645 + L1MA9 LINE L1 5800 6278 -34 2154 113 0 7 chr17 3373920 3374211 -86130342 - AluSx SINE Alu -23 289 1 22 56 0 0 chr17 3374445 3374481 -86130072 + AT_rich Low_complexity Low_complexity 1 36 0 300 291 38 13 chr17 3374711 3374790 -86129763 - MIR3 SINE MIR -30 178 98 1980 162 0 19 chr17 3375012 3375327 -86129226 + AluJo SINE Alu 3 311 -1 848 121 86 17 chr17 3375590 3375764 -86128789 - MER53 DNA DNA -1 188 3 22 88 0 0 chr17 3376120 3376177 -86128376 + AT_rich Low_complexity Low_complexity 1 57 0 301 256 44 0 chr17 3376219 3376309 -86128244 + MIR SINE MIR 132 225 -37 217 316 0 13 chr17 3376894 3376970 -86127583 + GA-rich Low_complexity Low_complexity 2 76 0 3327 152 34 7 chr17 3377724 3378310 -86126243 - MER7C DNA MER2_type 0 602 1 189 74 0 0 chr17 3378314 3378341 -86126212 + (CTATT)n Simple_repeat Simple_repeat 4 30 0 201 143 0 0 chr17 3378413 3378448 -86126105 + (TCTCCC)n Simple_repeat Simple_repeat 4 38 0 494 316 124 0 chr17 3379287 3379496 -86125057 + MIR SINE MIR 21 255 -7 233 229 114 14 chr17 3379487 3379557 -86124996 - MIR SINE MIR -95 113 37 * 267 303 55 9 chr17 3379937 3380046 -86124507 - L2 LINE L2 -25 3247 3134 23 0 0 0 chr17 3380591 3380614 -86123939 + AT_rich Low_complexity Low_complexity 1 23 0 967 193 32 32 chr17 3380669 3380740 -86123813 - L1MB7 LINE L1 -1 6183 6113 2388 87 3 3 chr17 3380740 3381052 -86123501 - AluSq SINE Alu -1 312 1 967 193 32 32 chr17 3381052 3381229 -86123324 - L1MB7 LINE L1 -70 6114 5935 302 231 102 54 chr17 3381253 3381400 -86123153 - L1MB7 LINE L1 -367 5754 5601 994 251 39 7 chr17 3382230 3382694 -86121859 - LTR33 LTR ERVL -3 518 1 1798 89 20 16 chr17 3382756 3383076 -86121477 + AluSq SINE Alu 39 359 0 271 290 0 81 chr17 3383557 3383681 -86120872 - MIR SINE MIR -115 147 34 785 178 53 0 chr17 3385329 3385481 -86119072 + LTR45B LTR ERV1 3 162 -327 2151 102 3 7 chr17 3385482 3385785 -86118768 - AluY SINE Alu -9 302 1 896 59 0 0 chr17 3385786 3385888 -86118665 - AluSq/x SINE Alu -177 136 35 1042 130 35 130 chr17 3385891 3386206 -86118347 + LTR12 LTR ERV1 1 285 -429 234 237 0 0 chr17 3386206 3386265 -86118288 + LTR30 LTR ERV1 552 610 -112 710 185 39 0 chr17 3386269 3386399 -86118154 + LTR12 LTR ERV1 349 483 -231 366 121 0 15 chr17 3386795 3386861 -86117692 - MSTA LTR MaLR -363 65 1 1071 262 111 25 chr17 3386895 3387338 -86117215 + MLT1E LTR MaLR 1 481 -112 427 135 34 149 chr17 3387329 3387401 -86117152 + Charlie5 DNA MER1_type 2334 2382 -242 * 2234 114 3 0 chr17 3387401 3387707 -86116846 + AluSc SINE Alu 1 307 -2 427 135 34 149 chr17 3387707 3387782 -86116771 + Charlie5 DNA MER1_type 2382 2464 -160 702 149 54 0 chr17 3387840 3387988 -86116565 + Charlie5 DNA MER1_type 2469 2624 0 488 248 74 0 chr17 3388499 3388648 -86115905 + MER105 DNA DNA 3 162 -42 230 171 0 0 chr17 3388647 3388688 -86115865 - MER105 DNA DNA -162 42 2 * 2890 194 41 68 chr17 3388908 3389466 -86115087 + L1MCa LINE L1 7 283 -5624 2112 132 0 3 chr17 3389466 3389762 -86114791 - AluSq SINE Alu -18 295 1 2890 194 41 68 chr17 3389762 3390519 -86114034 + L1MCa LINE L1 283 1058 -4849 1812 175 29 14 chr17 3390563 3390911 -86113642 + MLT1A1 LTR MaLR 13 365 0 1407 186 49 16 chr17 3390911 3391369 -86113184 + L1MCa LINE L1 1087 1530 -4896 1388 180 34 3 chr17 3391376 3391671 -86112882 + L1MA9 LINE L1 6009 6312 0 330 322 51 73 chr17 3391676 3391949 -86112604 + L1MC/D LINE L1 5433 5699 -2109 7857 31 0 0 chr17 3391949 3392923 -86111630 - L1PA2 LINE L1 -1786 4360 3387 8849 23 1 0 chr17 3392923 3394730 -86109823 + L1PA2 LINE L1 4346 6153 -2 1118 28 0 14 chr17 3394738 3394880 -86109673 - MER11A LTR ERVK -1126 140 1 430 141 0 0 chr17 3394881 3394959 -86109594 - L1P LINE L1 -1059 5087 5010 3934 99 11 0 chr17 3394959 3395508 -86109045 + L1PA11 LINE L1 5615 6174 0 244 114 0 0 chr17 3395553 3395588 -86108965 - U2 snRNA snRNA -153 35 1 6992 61 17 54 chr17 3395877 3397525 -86107028 + SVA Other Other 200 1383 -3 199 319 121 17 chr17 3397547 3397663 -86106890 - L3 LINE CR1 -48 1529 1402 1047 190 121 6 chr17 3398361 3398655 -86105898 - MLT1A1 LTR MaLR 0 374 4 313 344 15 8 chr17 3399706 3399837 -86104716 - MER5A DNA MER1_type -3 186 55 245 236 0 132 chr17 3400212 3400318 -86104235 + MIR SINE MIR 28 119 -143 666 272 112 4 chr17 3400334 3400566 -86103987 + MIR SINE MIR 6 262 0 261 307 59 20 chr17 3400785 3400886 -86103667 + MIR SINE MIR 17 121 -87 1924 70 4 0 chr17 3401602 3401843 -86102710 + AluSq SINE Alu 64 305 -8 2443 63 0 7 chr17 3402195 3402498 -86102055 + AluY SINE Alu 1 301 -10 2227 87 0 0 chr17 3402600 3402876 -86101677 + AluSx SINE Alu 1 276 -36 242 114 0 23 chr17 3402888 3402932 -86101621 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr17 3402934 3402954 -86101599 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 211 255 268 33 chr17 3404169 3404322 -86100231 + MIR SINE MIR 74 262 0 197 298 21 53 chr17 3404679 3404773 -86099780 + L3 LINE CR1 1279 1369 -208 22 56 0 0 chr17 3404819 3404855 -86099698 + AT_rich Low_complexity Low_complexity 1 36 0 2261 86 11 0 chr17 3405218 3405522 -86099031 - AluSq SINE Alu 0 308 2 194 314 80 51 chr17 3406585 3406760 -86097793 + MIR SINE MIR 17 196 -66 2304 65 0 0 chr17 3408635 3408911 -86095642 + AluY SINE Alu 35 310 -1 2439 68 0 10 chr17 3409328 3409623 -86094930 + AluY SINE Alu 1 292 -19 309 361 90 25 chr17 3410192 3410547 -86094006 + L2 LINE L2 2369 2746 -568 487 255 64 43 chr17 3410834 3411022 -86093531 - MLT1J LTR MaLR -13 498 307 1748 172 0 33 chr17 3411540 3411620 -86092933 + AluJo SINE Alu 1 82 -230 4191 118 25 67 chr17 3411620 3412341 -86092212 - LTR8 LTR ERV1 0 691 1 1748 172 0 33 chr17 3412341 3412563 -86091990 + AluJo SINE Alu 82 293 -19 230 333 65 38 chr17 3413930 3414116 -86090437 + MIR SINE MIR 46 236 -26 24 0 0 0 chr17 3414196 3414220 -86090333 + AT_rich Low_complexity Low_complexity 1 24 0 1356 37 0 0 chr17 3414220 3414381 -86090172 - L1PA4 LINE L1 -3 6152 5992 2001 133 27 3 chr17 3415082 3415383 -86089170 - AluSx SINE Alu -4 308 1 263 268 89 8 chr17 3415516 3415639 -86088914 + L2 LINE L2 2927 3059 -213 346 282 110 6 chr17 3415670 3415833 -86088720 - L2 LINE L2 -7 3306 3127 498 217 59 12 chr17 3415997 3416242 -86088311 - MER5C DNA MER1_type -1 323 9 1854 149 35 0 chr17 3416445 3416734 -86087819 - AluJo SINE Alu -10 302 4 869 94 0 0 chr17 3416845 3416962 -86087591 + AluSp/q SINE Alu 188 304 -9 1570 236 52 11 chr17 3417110 3417362 -86087191 - LTR40b LTR ERVL 0 462 183 2514 70 0 3 chr17 3417362 3417661 -86086892 - AluSq SINE Alu -15 298 1 1570 236 52 11 chr17 3417661 3417852 -86086701 - LTR40b LTR ERVL -279 183 1 23 33 0 0 chr17 3418166 3418196 -86086357 + AT_rich Low_complexity Low_complexity 1 30 0 339 65 0 0 chr17 3418468 3418514 -86086039 + (TG)n Simple_repeat Simple_repeat 1 46 0 404 282 126 11 chr17 3419117 3419291 -86085262 - MLT1L LTR MaLR -413 202 9 2189 131 0 0 chr17 3419802 3420108 -86084445 + AluSx SINE Alu 1 306 -6 784 228 84 60 chr17 3420984 3421410 -86083143 + L1MC2 LINE L1 5344 5776 -737 348 195 133 9 chr17 3421684 3421797 -86082756 + L1MC2 LINE L1 6218 6344 0 423 369 51 6 chr17 3422402 3422716 -86081837 + L3 LINE CR1 520 847 -730 285 360 55 6 chr17 3422720 3422884 -86081669 + L3 LINE CR1 1012 1183 -394 2174 127 7 3 chr17 3422892 3423200 -86081353 + AluSx SINE Alu 1 309 -3 222 314 59 39 chr17 3423211 3423295 -86081258 + L3 LINE CR1 1280 1370 -207 2040 153 3 0 chr17 3423295 3423603 -86080950 - AluJo SINE Alu -2 310 2 222 314 59 39 chr17 3423603 3423671 -86080882 + L3 LINE CR1 1370 1435 -142 870 257 91 103 chr17 3423888 3424414 -86080139 + MLT1H LTR MaLR 30 549 0 203 138 0 0 chr17 3424971 3425000 -86079553 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1822 98 124 0 chr17 3425034 3425300 -86079253 - AluSq SINE Alu -14 299 1 195 274 59 88 chr17 3426259 3426361 -86078192 - MER5B DNA MER1_type -4 174 76 2398 97 0 0 chr17 3426553 3426863 -86077690 - AluSg SINE Alu 0 310 1 597 269 187 35 chr17 3427171 3427577 -86076976 - L2 LINE L2 -1 3312 2845 377 214 79 84 chr17 3427719 3427781 -86076772 - MER5B DNA MER1_type -1 177 116 2270 84 10 3 chr17 3427781 3428077 -86076476 + AluY SINE Alu 1 298 -13 377 214 79 84 chr17 3428077 3428192 -86076361 - MER5B DNA MER1_type -62 116 1 312 197 46 99 chr17 3428367 3428519 -86076034 + L1ME1 LINE L1 6005 6148 -18 323 260 55 87 chr17 3428533 3428660 -86075893 - MER5B DNA MER1_type -49 129 7 294 272 0 0 chr17 3428730 3428811 -86075742 - MER5A DNA MER1_type -80 109 29 * 315 235 202 8 chr17 3428807 3428926 -86075627 + MER5A DNA MER1_type 48 189 0 1910 147 7 10 chr17 3429344 3429644 -86074909 - AluJo SINE Alu -13 299 1 299 291 86 0 chr17 3430126 3430243 -86074310 + L2 LINE L2 3187 3313 0 13983 123 48 44 chr17 3430404 3431500 -86073053 + Tigger1 DNA MER2_type 11 1101 -1317 2476 67 0 7 chr17 3431500 3431800 -86072753 - AluY SINE Alu -13 298 1 13983 123 48 44 chr17 3431800 3432665 -86071888 + Tigger1 DNA MER2_type 1101 1986 -432 2149 121 0 7 chr17 3432665 3432971 -86071582 + AluSx SINE Alu 1 304 -8 13983 123 48 44 chr17 3432971 3433406 -86071147 + Tigger1 DNA MER2_type 1986 2418 0 267 31 0 0 chr17 3434199 3434231 -86070322 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 538 231 8 45 chr17 3434788 3434922 -86069631 + MIR SINE MIR 121 249 -13 2330 108 0 3 chr17 3435541 3435855 -86068698 - AluSp SINE Alu 0 313 1 295 367 72 4 chr17 3435882 3436119 -86068434 + L2 LINE L2 2724 2976 -338 278 284 102 31 chr17 3436270 3436397 -86068156 + L2 LINE L2 3176 3311 -2 2367 104 0 0 chr17 3436746 3437054 -86067499 - AluSx SINE Alu -4 308 1 2014 125 0 3 chr17 3437675 3437964 -86066589 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 3437985 3438023 -86066530 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 269 298 21 0 chr17 3438793 3438887 -86065666 + L1ME LINE L1 5558 5653 -468 6550 24 0 0 chr17 3439162 3439910 -86064643 + L1PA3 LINE L1 5408 6155 0 6941 55 17 0 chr17 3440214 3441181 -86063372 - L1PA8A LINE L1 -4 6127 5163 199 281 74 37 chr17 3442389 3442524 -86062029 + MIR3 SINE MIR 8 147 -61 222 235 224 20 chr17 3443033 3443131 -86061422 - L3 LINE CR1 -13 1564 1447 25 31 0 0 chr17 3445043 3445075 -86059478 + AT_rich Low_complexity Low_complexity 1 32 0 2413 103 0 0 chr17 3445095 3445406 -86059147 - AluSq SINE Alu -2 311 1 373 233 60 17 chr17 3445460 3445576 -86058977 - MIR3 SINE MIR -6 202 82 2011 111 49 0 chr17 3446406 3446694 -86057859 + AluSq SINE Alu 1 302 -11 2427 97 3 0 chr17 3446932 3447241 -86057312 + AluSq SINE Alu 1 310 -3 1093 88 0 0 chr17 3447754 3447891 -86056662 + AluSq/x SINE Alu 1 137 -175 1932 126 4 0 chr17 3447891 3448169 -86056384 + AluSx SINE Alu 1 279 -33 562 346 197 10 chr17 3448218 3448363 -86056190 - L3 LINE CR1 -2 1575 1458 2021 134 0 7 chr17 3448363 3448669 -86055884 + AluJb SINE Alu 1 304 -8 562 346 197 10 chr17 3448669 3448834 -86055719 - L3 LINE CR1 -119 1458 1325 2141 138 0 3 chr17 3448834 3449146 -86055407 - AluSx SINE Alu -1 311 1 562 346 197 10 chr17 3449146 3449438 -86055115 - L3 LINE CR1 -252 1325 859 244 173 177 0 chr17 3449459 3449524 -86055029 + MER5A DNA MER1_type 7 98 -91 1073 96 11 0 chr17 3450352 3450529 -86054024 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 780 121 0 0 chr17 3450545 3450677 -86053876 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 1092 24 0 0 chr17 3450778 3450904 -86053649 + L1PA5 LINE L1 6020 6145 -9 239 327 27 9 chr17 3451253 3451363 -86053190 + L2 LINE L2 2971 3082 -190 609 184 0 0 chr17 3451428 3451537 -86053016 - MER63 DNA MER1_type 0 1060 952 1637 127 19 0 chr17 3451543 3451802 -86052751 + L1MA9 LINE L1 6044 6307 -5 840 242 33 25 chr17 3451831 3451891 -86052662 - MER63 DNA MER1_type -96 964 906 2081 125 0 3 chr17 3451891 3452178 -86052375 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 3452178 3452209 -86052344 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2081 125 0 3 chr17 3452209 3452224 -86052329 + AluSx SINE Alu 288 302 -10 840 242 33 25 chr17 3452224 3452407 -86052146 - MER63 DNA MER1_type -154 906 719 827 170 105 0 chr17 3452409 3452609 -86051944 + MER44D DNA MER2_type 1 491 -118 2065 93 11 0 chr17 3452665 3452943 -86051610 + AluSx SINE Alu 30 310 -2 278 134 0 45 chr17 3452949 3453016 -86051537 - MER63 DNA MER1_type -746 184 121 * 677 149 0 25 chr17 3453014 3453135 -86051418 + MER44D DNA MER2_type 488 605 0 * 2000 189 38 34 chr17 3453135 3453535 -86051018 - MER63C DNA MER1_type -472 588 191 2173 114 7 0 chr17 3453535 3453841 -86050712 + AluSx SINE Alu 1 308 -4 2000 189 38 34 chr17 3453841 3453991 -86050562 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 3453991 3454022 -86050531 + (CA)n Simple_repeat Simple_repeat 2 32 0 2000 189 38 34 chr17 3454022 3454056 -86050497 - MER63C DNA MER1_type -1027 33 1 227 281 0 0 chr17 3454194 3454251 -86050302 + MIR SINE MIR 87 143 -65 835 188 0 0 chr17 3454787 3454920 -86049633 + FLAM_C SINE Alu 1 133 0 2171 89 0 0 chr17 3455135 3455416 -86049137 - AluSx SINE Alu -30 282 2 1097 201 82 11 chr17 3455440 3455719 -86048834 + L1MB2 LINE L1 5868 6166 -5 1958 109 31 14 chr17 3455719 3456012 -86048541 - AluSx SINE Alu -14 298 1 2108 125 3 0 chr17 3456294 3456598 -86047955 + AluSq SINE Alu 1 305 -8 322 137 0 0 chr17 3456690 3456741 -86047812 - Alu SINE Alu -244 55 5 319 294 89 89 chr17 3457233 3457682 -86046871 + L2 LINE L2 2824 3272 0 442 201 8 8 chr17 3457682 3457816 -86046737 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 3457828 3457953 -86046600 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 197 337 58 0 chr17 3457972 3458058 -86046495 - MIR SINE MIR -113 149 59 201 225 202 0 chr17 3458811 3458900 -86045653 + MIR3 SINE MIR 82 188 -20 401 281 51 7 chr17 3459336 3459510 -86045043 + MIR3 SINE MIR 4 184 -67 423 301 27 70 chr17 3460808 3460871 -86043682 + MER5B DNA MER1_type 1 65 -113 2296 102 3 3 chr17 3460871 3461184 -86043369 + AluSq SINE Alu 1 313 0 423 301 27 70 chr17 3461184 3461306 -86043247 + MER5B DNA MER1_type 65 178 0 1241 225 171 45 chr17 3463191 3463594 -86040959 + L2 LINE L2 2607 2958 -355 2271 93 0 0 chr17 3463594 3463894 -86040659 - AluSc SINE Alu -9 300 1 1241 225 171 45 chr17 3463894 3464105 -86040448 + L2 LINE L2 2958 3313 0 864 116 20 20 chr17 3464368 3464515 -86040038 + AluSg/x SINE Alu 161 307 -5 306 286 18 78 chr17 3464525 3464742 -86039811 + L1ME1 LINE L1 5955 6158 -8 257 267 238 0 chr17 3464868 3464973 -86039580 + MIR SINE MIR 17 146 -62 457 178 12 41 chr17 3465225 3465394 -86039159 + CT-rich Low_complexity Low_complexity 4 167 0 514 140 39 39 chr17 3465533 3465712 -86038841 + CT-rich Low_complexity Low_complexity 1 179 0 223 167 0 24 chr17 3465712 3465754 -86038799 + C-rich Low_complexity Low_complexity 2 42 0 364 276 158 43 chr17 3466100 3466404 -86038149 - L2 LINE L2 -8 3264 2926 2006 108 3 0 chr17 3466539 3466827 -86037726 + AluSq SINE Alu 21 309 -4 813 134 8 52 chr17 3467307 3467472 -86037081 - AluJo SINE Alu 0 312 166 812 141 0 8 chr17 3467616 3467737 -86036816 - AluJo SINE Alu -146 166 47 1987 96 55 17 chr17 3467834 3468125 -86036428 + AluSx SINE Alu 1 302 -10 2235 83 24 0 chr17 3468130 3468419 -86036134 + AluY SINE Alu 2 297 -14 442 318 52 87 chr17 3468438 3468804 -86035749 + L1MC4a LINE L1 5260 5255 -907 2292 85 0 0 chr17 3468804 3469097 -86035456 - AluSx SINE Alu -19 293 1 442 318 52 87 chr17 3469097 3469428 -86035125 + L1MC4a LINE L1 5254 5595 -567 1853 137 7 10 chr17 3469584 3469909 -86034644 + AluJb SINE Alu 1 312 0 23 0 0 0 chr17 3469972 3469995 -86034558 + AT_rich Low_complexity Low_complexity 1 23 0 191 273 101 30 chr17 3470061 3470160 -86034393 - MIR SINE MIR -59 203 98 773 97 142 0 chr17 3470160 3470312 -86034241 + AluSc SINE Alu 154 321 0 306 325 57 8 chr17 3470757 3470880 -86033673 - L2 LINE L2 0 3313 3185 2232 96 0 7 chr17 3471296 3471599 -86032954 + AluSx SINE Alu 1 301 -11 184 286 48 36 chr17 3471910 3471994 -86032559 + L2 LINE L2 2871 2955 -317 2251 90 10 6 chr17 3472158 3472469 -86032084 - AluSx SINE Alu 0 312 1 371 265 20 10 chr17 3472471 3472573 -86031980 + L2 LINE L2 3169 3271 -1 257 317 42 17 chr17 3473479 3473599 -86030954 + L2 LINE L2 2699 2821 -493 2197 114 3 0 chr17 3474211 3474518 -86030035 - AluSg SINE Alu -2 308 1 2111 105 0 53 chr17 3474927 3475250 -86029303 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 3475324 3475369 -86029184 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 182 288 0 51 chr17 3475621 3475680 -86028873 - MIR SINE MIR -77 185 130 698 233 17 11 chr17 3475717 3475897 -86028656 - MER4C LTR ERV1 -9 456 276 1927 119 26 35 chr17 3475916 3476228 -86028325 + AluSx SINE Alu 1 309 -3 480 172 30 96 chr17 3476270 3476377 -86028176 - MER4C LTR ERV1 -201 349 286 2191 110 0 0 chr17 3476377 3476677 -86027876 + AluSx SINE Alu 7 306 -6 480 172 30 96 chr17 3476677 3476803 -86027750 - MER4C LTR ERV1 -264 286 153 302 295 9 0 chr17 3476840 3476907 -86027646 - MIR SINE MIR -97 111 39 1836 151 35 0 chr17 3476907 3477191 -86027362 + AluSx SINE Alu 1 294 -18 302 295 9 0 chr17 3477191 3477216 -86027337 - MIR SINE MIR -169 39 16 1958 131 3 0 chr17 3477550 3477840 -86026713 + AluSx SINE Alu 1 291 -21 284 375 18 0 chr17 3478490 3478602 -86025951 - MIR SINE MIR -62 146 33 459 222 67 22 chr17 3478978 3479113 -86025440 + MIR3 SINE MIR 33 173 -35 565 284 45 7 chr17 3479450 3479605 -86024948 - L2 LINE L2 -3 3310 3150 851 177 30 3 chr17 3479733 3480112 -86024441 + (TGGA)n Simple_repeat Simple_repeat 1 389 0 770 121 42 0 chr17 3480128 3480294 -86024259 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2542 56 0 0 chr17 3480733 3481038 -86023515 - AluY SINE Alu -6 305 1 2249 112 0 13 chr17 3482085 3482398 -86022155 - AluSg SINE Alu 0 310 2 225 0 0 0 chr17 3482398 3482423 -86022130 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2274 81 0 3 chr17 3482423 3482708 -86021845 - AluSx SINE Alu -28 284 1 424 316 131 24 chr17 3483205 3483657 -86020896 + L2 LINE L2 2306 2805 -509 329 293 73 32 chr17 3484384 3484507 -86020046 - MIR SINE MIR -8 254 127 325 340 112 5 chr17 3485439 3485636 -86018917 - L3 LINE CR1 -396 1181 964 2246 98 3 3 chr17 3486112 3486419 -86018134 + AluSx SINE Alu 4 310 -2 188 259 129 24 chr17 3487115 3487200 -86017353 + MIR3 SINE MIR 94 187 -21 195 359 60 8 chr17 3488241 3488358 -86016195 + MIR SINE MIR 92 214 -48 551 304 63 8 chr17 3488523 3488743 -86015810 + MIR SINE MIR 32 260 -2 1419 113 24 0 chr17 3489923 3490136 -86014417 + AluSg/x SINE Alu 95 312 0 2669 150 30 35 chr17 3490264 3490640 -86013913 + L1MC1 LINE L1 5413 5786 -547 2082 130 0 9 chr17 3490640 3490955 -86013598 + AluSx SINE Alu 1 312 0 2669 150 30 35 chr17 3490955 3491145 -86013408 + L1MC1 LINE L1 5786 5976 -357 2023 136 3 3 chr17 3491145 3491447 -86013106 + AluJb SINE Alu 1 302 -10 1926 128 13 13 chr17 3491458 3491762 -86012791 + AluJo SINE Alu 1 304 -8 2114 125 3 0 chr17 3491926 3492229 -86012324 + AluSx SINE Alu 1 304 -8 583 313 99 0 chr17 3492396 3492588 -86011965 + MIR SINE MIR 2 212 -50 10561 49 14 17 chr17 3492954 3494344 -86010209 - SVA Other Other 0 1386 1 216 0 0 0 chr17 3494344 3494368 -86010185 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 414 157 14 171 chr17 3494404 3494544 -86010009 - MER58B DNA MER1_type -1 340 223 288 172 0 0 chr17 3494550 3494608 -86009945 + (CA)n Simple_repeat Simple_repeat 2 59 0 2372 91 0 0 chr17 3495149 3495457 -86009096 + AluSq SINE Alu 1 308 -5 2089 130 0 9 chr17 3495468 3495783 -86008770 + AluSq SINE Alu 1 312 -1 2181 97 3 37 chr17 3496338 3496659 -86007894 + AluSq SINE Alu 4 313 0 318 182 11 11 chr17 3496963 3497054 -86007499 + Alu SINE Alu 241 302 0 2651 39 0 0 chr17 3497299 3497610 -86006943 + AluY SINE Alu 1 311 0 368 338 0 0 chr17 3497825 3497964 -86006589 + L1MEc LINE L1 35 173 -6223 2009 128 0 44 chr17 3498018 3498164 -86006389 + AluSx SINE Alu 1 152 -160 3139 38 0 3 chr17 3498164 3498536 -86006017 + L1PA5 LINE L1 5782 6152 -2 2009 128 0 44 chr17 3498536 3498710 -86005843 + AluSx SINE Alu 152 307 -5 370 378 15 5 chr17 3498712 3498916 -86005637 + L1MEc LINE L1 165 370 -6026 714 154 18 77 chr17 3499281 3499366 -86005187 + L1MB4 LINE L1 5978 6067 -113 1917 86 79 7 chr17 3499366 3499646 -86004907 + AluSx SINE Alu 1 300 -12 714 154 18 77 chr17 3499646 3499769 -86004784 + L1MB4 LINE L1 6067 6174 -6 2255 97 0 10 chr17 3499966 3500274 -86004279 - AluSx SINE Alu -7 305 1 844 258 22 45 chr17 3501809 3501954 -86002599 + MIR SINE MIR 2 140 -122 2276 110 0 0 chr17 3501954 3502263 -86002290 + AluSx SINE Alu 1 309 -3 844 258 22 45 chr17 3502263 3502384 -86002169 + MIR SINE MIR 140 262 0 419 238 98 0 chr17 3503365 3503487 -86001066 - MER91B DNA MER1_type -56 134 1 2645 199 30 47 chr17 3503895 3503917 -86000636 + L1MC4 LINE L1 6907 6928 -1114 1905 80 113 0 chr17 3503917 3504192 -86000361 + AluSx SINE Alu 1 306 -6 2645 199 30 47 chr17 3504192 3504453 -86000100 + L1MC4 LINE L1 6928 7192 -850 2104 118 0 0 chr17 3504453 3504749 -85999804 + AluSx SINE Alu 3 298 -14 2645 199 30 47 chr17 3504749 3505194 -85999359 + L1MC4 LINE L1 7192 7624 -418 1820 115 39 21 chr17 3505194 3505480 -85999073 + AluSx SINE Alu 1 291 -21 2289 95 0 22 chr17 3505485 3505620 -85998933 + AluSx SINE Alu 1 137 -175 2323 79 0 0 chr17 3505620 3505918 -85998635 + AluY SINE Alu 1 299 -8 270 81 0 0 chr17 3505918 3505955 -85998598 + (TA)n Simple_repeat Simple_repeat 1 37 0 2289 95 0 22 chr17 3505959 3506140 -85998413 + AluSx SINE Alu 137 310 -2 2078 95 0 18 chr17 3507282 3507621 -85996932 + AluSg SINE Alu 1 334 0 1155 134 70 0 chr17 3507633 3507819 -85996734 + AluSx SINE Alu 1 199 -113 3096 144 8 16 chr17 3507940 3508454 -85996099 + L1PA16 LINE L1 5651 6160 -6 2224 107 0 0 chr17 3508732 3509031 -85995522 - AluSx SINE Alu -13 299 1 504 154 5 199 chr17 3509081 3509282 -85995271 + MER20 DNA MER1_type 1 162 -57 200 204 45 0 chr17 3509586 3509630 -85994923 - L2 LINE L2 -2 3311 3266 2280 77 7 7 chr17 3509989 3510288 -85994265 + AluSx SINE Alu 1 299 -13 623 136 164 9 chr17 3510399 3510509 -85994044 - FLAM_A SINE Alu -6 136 10 2352 68 0 3 chr17 3510859 3511153 -85993400 + AluSc SINE Alu 1 293 -16 2562 61 0 0 chr17 3511162 3511473 -85993080 + AluY SINE Alu 1 311 0 978 189 0 0 chr17 3511493 3511657 -85992896 + FRAM SINE Alu 2 165 -1 2216 91 3 7 chr17 3511945 3512241 -85992312 + AluSq SINE Alu 6 300 -13 2211 85 26 0 chr17 3513265 3513570 -85990983 + AluSp SINE Alu 1 313 0 928 93 0 0 chr17 3513572 3513701 -85990852 + AluY SINE Alu 175 303 -8 2145 109 3 0 chr17 3513779 3514073 -85990480 + AluSx SINE Alu 1 295 -17 2101 116 3 3 chr17 3514413 3514715 -85989838 - AluSp SINE Alu -11 302 1 214 296 167 9 chr17 3515347 3515455 -85989098 + MIR3 SINE MIR 48 172 -36 2045 122 3 3 chr17 3515754 3516062 -85988491 + AluSx SINE Alu 1 308 0 385 363 163 7 chr17 3516120 3516420 -85988133 - L3 LINE CR1 -39 1538 1192 1979 126 20 0 chr17 3516801 3517095 -85987458 + AluSp SINE Alu 1 300 -13 202 189 0 0 chr17 3517370 3517407 -85987146 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 2123 119 0 22 chr17 3517790 3518108 -85986445 + AluSq SINE Alu 1 311 -2 530 202 0 29 chr17 3518249 3518353 -85986200 + AluJo SINE Alu 120 220 -92 2053 140 16 0 chr17 3518460 3518767 -85985786 - AluSx SINE Alu 0 312 1 192 291 0 0 chr17 3521933 3521988 -85982565 + MIR SINE MIR 92 146 -62 252 0 0 0 chr17 3522347 3522375 -85982178 + (TG)n Simple_repeat Simple_repeat 2 29 0 1214 109 0 0 chr17 3522375 3522540 -85982013 - AluSg/x SINE Alu -40 270 106 2424 62 7 10 chr17 3523075 3523384 -85981169 + AluSq SINE Alu 3 310 -3 246 32 0 0 chr17 3523384 3523415 -85981138 + (CAG)n Simple_repeat Simple_repeat 2 32 0 237 143 24 0 chr17 3523578 3523620 -85980933 - MER57A LTR ERV1 -66 337 295 658 243 106 23 chr17 3524394 3524612 -85979941 - MIR SINE MIR -19 243 8 234 0 0 0 chr17 3525525 3525551 -85979002 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 584 265 82 0 chr17 3525908 3526078 -85978475 - MIR SINE MIR -22 240 57 377 172 98 163 chr17 3526833 3526897 -85977656 - MER105 DNA DNA -1 203 136 2246 109 0 0 chr17 3526897 3527201 -85977352 - AluSg SINE Alu -6 304 1 377 172 98 163 chr17 3527201 3527351 -85977202 - MER105 DNA DNA -68 136 3 192 345 0 0 chr17 3527640 3527695 -85976858 - MIR SINE MIR -109 153 99 2304 89 0 3 chr17 3527793 3528096 -85976457 - AluSx SINE Alu -10 302 1 2223 84 3 3 chr17 3528186 3528473 -85976080 + AluSq SINE Alu 1 287 -26 22 0 0 0 chr17 3528473 3528495 -85976058 + AT_rich Low_complexity Low_complexity 1 22 0 3148 134 23 44 chr17 3528495 3528849 -85975704 - L1MB3 LINE L1 -7 6176 5837 2038 134 27 0 chr17 3528849 3529148 -85975405 - AluSg SINE Alu -3 307 1 3148 134 23 44 chr17 3529148 3529366 -85975187 - L1MB3 LINE L1 -346 5837 5616 2038 117 0 3 chr17 3529535 3529845 -85974708 + AluSx SINE Alu 1 309 0 1379 177 42 28 chr17 3530835 3531123 -85973430 - AluJo SINE Alu -20 292 1 546 275 35 18 chr17 3531230 3531401 -85973152 - MIR SINE MIR -10 252 79 2347 63 6 19 chr17 3532069 3532386 -85972167 + AluSp SINE Alu 1 313 0 204 346 122 39 chr17 3532633 3532838 -85971715 + MIR SINE MIR 7 228 -34 191 322 132 25 chr17 3533353 3533474 -85971079 - L2 LINE L2 -260 3053 2920 2411 82 0 19 chr17 3533545 3533863 -85970690 + AluSx SINE Alu 1 312 0 503 294 69 20 chr17 3534332 3534455 -85970098 + MIR SINE MIR 49 187 -75 1984 141 0 3 chr17 3534455 3534752 -85969801 + AluSx SINE Alu 1 296 -16 503 294 69 20 chr17 3534752 3534832 -85969721 + MIR SINE MIR 187 262 0 866 255 30 64 chr17 3535117 3535177 -85969376 - MLT1I LTR MaLR -15 394 334 234 0 0 0 chr17 3535177 3535203 -85969350 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2028 97 0 11 chr17 3535206 3535485 -85969068 - AluSx SINE Alu -31 281 6 866 255 30 64 chr17 3535485 3535718 -85968835 - MLT1I LTR MaLR -77 332 107 2163 103 14 0 chr17 3536294 3536586 -85967967 + AluSx SINE Alu 1 296 -16 2392 183 106 111 chr17 3536588 3536767 -85967786 - MER44D DNA MER2_type -1882 605 427 2243 111 0 0 chr17 3536767 3537065 -85967488 - AluSx SINE Alu -14 298 1 2392 183 106 111 chr17 3537065 3537161 -85967392 - MER44D DNA MER2_type -2060 427 332 2114 127 13 0 chr17 3537161 3537468 -85967085 + AluSx SINE Alu 1 311 -1 2392 183 106 111 chr17 3537468 3537928 -85966625 - MER44D DNA MER2_type -2155 332 1 2126 103 21 0 chr17 3538124 3538415 -85966138 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 3538552 3538580 -85965973 + (GA)n Simple_repeat Simple_repeat 1 28 0 2338 89 0 0 chr17 3540516 3540819 -85963734 + AluSq SINE Alu 1 303 -10 1955 138 20 13 chr17 3541028 3541333 -85963220 - AluSx SINE Alu -5 307 1 2081 128 3 0 chr17 3541374 3541672 -85962881 + AluSx SINE Alu 1 299 -13 416 302 16 1 chr17 3541780 3541913 -85962640 - MER5B DNA MER1_type -40 149 1 253 316 158 38 chr17 3541939 3541981 -85962572 - MER5A DNA MER1_type -1 188 152 2383 74 0 0 chr17 3541981 3542278 -85962275 - AluSg SINE Alu -13 297 1 253 316 158 38 chr17 3542278 3542393 -85962160 - MER5A DNA MER1_type -37 152 12 566 236 52 40 chr17 3542413 3542587 -85961966 + MER5B DNA MER1_type 1 176 -2 1944 96 0 0 chr17 3542648 3542897 -85961656 - AluSx SINE Alu -63 249 1 848 158 0 15 chr17 3542954 3543087 -85961466 - FLAM_A SINE Alu -2 131 1 243 310 100 0 chr17 3543343 3543443 -85961110 - MIR SINE MIR -73 135 26 2267 70 0 3 chr17 3543471 3543783 -85960770 + AluY SINE Alu 1 311 0 2433 83 0 0 chr17 3543794 3544106 -85960447 + AluSx SINE Alu 1 312 0 2285 97 0 0 chr17 3545080 3545379 -85959174 - AluSg1 SINE Alu -10 299 1 1511 196 72 19 chr17 3545379 3545860 -85958693 + MLT1F LTR MaLR 35 542 0 2116 117 3 3 chr17 3545955 3546264 -85958289 - AluSg SINE Alu -1 309 1 1096 82 0 0 chr17 3546264 3546399 -85958154 - AluSq/x SINE Alu -178 135 1 358 223 71 9 chr17 3546550 3546662 -85957891 + MER57-int LTR ERV1 127 245 -7292 516 86 26 192 chr17 3547051 3547202 -85957351 + MER57-int LTR ERV1 1177 1302 -3569 367 228 70 70 chr17 3547202 3547329 -85957224 + MER93b LTR ERV1 199 328 -45 2198 109 0 3 chr17 3547329 3547632 -85956921 - AluSg1 SINE Alu -7 302 1 367 228 70 70 chr17 3547632 3547662 -85956891 + MER93b LTR ERV1 327 356 -17 1230 156 7 48 chr17 3547692 3547727 -85956826 - L1M4 LINE L1 -391 5793 5758 2338 82 0 3 chr17 3547727 3548021 -85956532 + AluSc SINE Alu 1 293 -16 1230 156 7 48 chr17 3548021 3548254 -85956299 - L1M4 LINE L1 -426 5758 5536 2168 101 0 3 chr17 3548682 3548978 -85955575 + AluSc SINE Alu 1 295 -14 1179 181 23 30 chr17 3549160 3549426 -85955127 + MER58B DNA MER1_type 78 341 0 2338 73 0 20 chr17 3549492 3549795 -85954758 - AluY SINE Alu -14 297 1 2331 68 3 0 chr17 3549796 3550088 -85954465 - AluSg1 SINE Alu -16 293 1 773 163 6 17 chr17 3550702 3550874 -85953679 + CT-rich Low_complexity Low_complexity 2 171 0 2302 106 0 0 chr17 3550874 3551186 -85953367 - AluSx SINE Alu 0 312 1 1109 159 17 0 chr17 3551188 3551364 -85953189 - AluJb SINE Alu -16 296 118 2446 70 0 3 chr17 3551930 3552242 -85952311 - AluSx SINE Alu -1 311 1 221 270 0 40 chr17 3553028 3553102 -85951451 + MIR SINE MIR 85 155 -107 256 315 9 28 chr17 3553596 3553704 -85950849 + MIR SINE MIR 31 136 -126 1953 133 0 3 chr17 3553877 3554192 -85950361 - AluSx SINE Alu 0 314 1 2193 245 45 13 chr17 3554462 3555000 -85949553 + MLT1H1 LTR MaLR 1 555 0 2287 98 0 0 chr17 3555008 3555314 -85949239 + AluSx SINE Alu 1 306 -6 541 298 55 36 chr17 3555317 3555646 -85948907 - HAL1 LINE L1 -963 1544 1210 2208 82 0 23 chr17 3555674 3555977 -85948576 + AluY SINE Alu 4 299 -12 1084 140 0 28 chr17 3555977 3556155 -85948398 + AluSq SINE Alu 135 307 -6 509 283 69 24 chr17 3556157 3556485 -85948068 - L1M4 LINE L1 -656 5522 5182 263 206 27 0 chr17 3557470 3557543 -85947010 + L1MC5 LINE L1 7832 7906 -55 2385 84 0 0 chr17 3557558 3557856 -85946697 - AluSg SINE Alu -12 298 1 1830 166 0 13 chr17 3557880 3558188 -85946365 - AluJo SINE Alu -8 304 1 227 324 152 0 chr17 3558200 3558305 -85946248 - L3 LINE CR1 -118 1459 1339 465 332 76 5 chr17 3558339 3558550 -85946003 + MIR SINE MIR 18 243 -19 2311 93 10 0 chr17 3558684 3558985 -85945568 + AluSq SINE Alu 1 304 -9 2169 85 0 20 chr17 3559811 3560106 -85944447 + AluSx SINE Alu 1 289 -23 850 189 148 71 chr17 3560628 3560751 -85943802 + MER33 DNA MER1_type 4 116 -2469 2306 103 3 0 chr17 3560751 3561062 -85943491 - AluSx SINE Alu 0 312 1 850 189 148 71 chr17 3561062 3561205 -85943348 + MER33 DNA MER1_type 116 298 -2287 2246 79 7 0 chr17 3561205 3561495 -85943058 - AluSc SINE Alu -17 292 1 850 189 148 71 chr17 3561495 3561524 -85943029 + MER33 DNA MER1_type 298 323 -1 504 204 11 0 chr17 3561542 3561635 -85942918 + AluJ/FLAM SINE Alu 1 94 -218 258 195 0 91 chr17 3561966 3562043 -85942510 - MIR3 SINE MIR -38 170 101 2394 78 0 7 chr17 3562212 3562520 -85942033 - AluSx SINE Alu -6 306 1 1112 182 47 23 chr17 3562538 3562752 -85941801 + MER20 DNA MER1_type 1 219 0 5228 21 0 0 chr17 3562946 3563520 -85941033 + SVA Other Other 809 1382 -4 2196 111 0 7 chr17 3563528 3563835 -85940718 + AluSx SINE Alu 2 306 -6 2011 116 0 0 chr17 3564128 3564403 -85940150 + AluSx SINE Alu 1 275 -37 739 47 0 19 chr17 3564414 3564520 -85940033 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2307 33 0 0 chr17 3564520 3564793 -85939760 - AluY SINE Alu -38 273 1 299 171 198 36 chr17 3566608 3566719 -85937834 - MER106A DNA MER1_type -56 180 52 2369 60 0 10 chr17 3566723 3567024 -85937529 - AluSx SINE Alu -14 298 1 2262 104 0 0 chr17 3567484 3567782 -85936771 - AluSq SINE Alu -15 298 1 2211 102 0 0 chr17 3568633 3568927 -85935626 + AluSx SINE Alu 4 297 -15 22 56 0 0 chr17 3568927 3568963 -85935590 + AT_rich Low_complexity Low_complexity 1 36 0 1767 164 0 23 chr17 3569867 3570171 -85934382 + AluJo SINE Alu 6 302 -10 243 324 29 19 chr17 3570408 3570513 -85934040 + MARNA DNA Mariner 62 167 -419 2287 100 0 3 chr17 3570619 3570929 -85933624 - AluSg SINE Alu -1 309 1 630 174 0 0 chr17 3571280 3571418 -85933135 + (TG)n Simple_repeat Simple_repeat 1 138 0 307 283 19 9 chr17 3571486 3571592 -85932961 - MIR SINE MIR -43 165 59 2243 98 3 3 chr17 3571658 3571963 -85932590 + AluSx SINE Alu 1 305 -7 497 264 71 13 chr17 3572130 3572285 -85932268 + MIR SINE MIR 2 165 -97 2317 81 0 0 chr17 3572285 3572581 -85931972 + AluY SINE Alu 1 296 -15 1172 170 0 77 chr17 3572699 3572827 -85931726 + AluJb SINE Alu 1 101 -211 2070 104 14 7 chr17 3572827 3573115 -85931438 - AluSx SINE Alu -22 290 1 1172 170 0 77 chr17 3573115 3573245 -85931308 + AluJb SINE Alu 101 239 -73 714 258 57 0 chr17 3573386 3573580 -85930973 - MIR SINE MIR 0 262 58 2289 103 0 0 chr17 3573701 3574012 -85930541 - AluY SINE Alu 0 311 1 917 135 0 0 chr17 3574016 3574149 -85930404 - AluSq/x SINE Alu -179 133 1 2228 119 0 0 chr17 3574826 3575128 -85929425 + AluSx SINE Alu 1 302 -10 2099 115 10 7 chr17 3575531 3575835 -85928718 - AluSc SINE Alu -4 305 1 790 176 0 47 chr17 3575837 3575985 -85928568 - FLAM_C SINE Alu -2 141 1 2131 109 0 10 chr17 3578418 3578720 -85925833 + AluSx SINE Alu 3 301 -11 263 284 226 0 chr17 3578784 3578886 -85925667 + MER5A DNA MER1_type 59 183 -6 912 131 25 175 chr17 3579107 3579227 -85925326 + L1MA9 LINE L1 6036 6125 -187 229 175 0 0 chr17 3579227 3579267 -85925286 + Alu SINE Alu 135 174 -134 912 131 25 175 chr17 3579267 3579427 -85925126 + L1MA9 LINE L1 6125 6307 -5 971 211 11 0 chr17 3579571 3579756 -85924797 + AluJo SINE Alu 121 307 -5 2221 110 3 0 chr17 3580042 3580351 -85924202 - AluSx SINE Alu -2 310 1 2065 107 14 0 chr17 3580360 3580640 -85923913 - AluSx SINE Alu -28 284 1 399 287 100 10 chr17 3580687 3580923 -85923630 + L1ME3A LINE L1 5907 6162 0 2377 87 0 6 chr17 3580939 3581251 -85923302 + AluSx SINE Alu 1 310 -2 371 301 32 75 chr17 3581432 3581563 -85922990 + MIR SINE MIR 84 206 -56 2147 125 0 0 chr17 3581563 3581859 -85922694 + AluSq SINE Alu 1 296 -17 371 301 32 75 chr17 3581859 3581913 -85922640 + MIR SINE MIR 206 261 -1 847 82 16 16 chr17 3582249 3582371 -85922182 + FRAM SINE Alu 18 139 -37 2066 105 3 3 chr17 3582383 3582669 -85921884 + AluSx SINE Alu 1 286 -26 2231 108 0 0 chr17 3582849 3583145 -85921408 + AluSp SINE Alu 3 298 -15 476 286 71 18 chr17 3583401 3583569 -85920984 - MIR SINE MIR -23 239 63 2306 87 0 22 chr17 3583646 3583958 -85920595 + AluSx SINE Alu 1 305 -7 791 105 0 0 chr17 3583968 3584073 -85920480 + FLAM_C SINE Alu 1 105 -38 364 267 25 25 chr17 3585336 3585497 -85919056 + C-rich Low_complexity Low_complexity 5 165 0 310 298 17 44 chr17 3585519 3585700 -85918853 + C-rich Low_complexity Low_complexity 5 180 0 220 271 17 0 chr17 3586333 3586392 -85918161 + GA-rich Low_complexity Low_complexity 4 63 0 308 296 65 0 chr17 3588601 3588709 -85915844 - MIR SINE MIR -113 149 35 2264 101 0 0 chr17 3591286 3591583 -85912970 + AluSq SINE Alu 1 297 -16 240 35 0 0 chr17 3595001 3595030 -85909523 + (A)n Simple_repeat Simple_repeat 1 29 0 2371 67 10 0 chr17 3596322 3596622 -85907931 + AluSx SINE Alu 1 303 -9 640 257 48 62 chr17 3599113 3599145 -85905408 - MIR SINE MIR 0 262 231 2242 97 0 19 chr17 3599145 3599455 -85905098 + AluSx SINE Alu 1 304 -8 640 257 48 62 chr17 3599455 3599651 -85904902 - MIR SINE MIR -31 231 38 2090 99 7 20 chr17 3599844 3600146 -85904407 + AluSx SINE Alu 1 298 -14 2349 73 3 0 chr17 3600259 3600559 -85903994 + AluSp SINE Alu 1 301 -12 1482 157 52 28 chr17 3600610 3600896 -85903657 + AluJb SINE Alu 3 295 -17 272 343 72 12 chr17 3601034 3601200 -85903353 - L2 LINE L2 -214 3058 2883 502 155 10 62 chr17 3601237 3601334 -85903219 + FRAM SINE Alu 4 95 -81 298 247 62 0 chr17 3601794 3601875 -85902678 - L1ME LINE L1 -343 5778 5693 2137 110 0 25 chr17 3602159 3602477 -85902076 + AluSg SINE Alu 1 310 0 234 313 115 0 chr17 3603136 3603232 -85901321 - MIR3 SINE MIR -11 197 91 2295 50 9 40 chr17 3603287 3603608 -85900945 + AluY SINE Alu 1 311 0 675 335 80 15 chr17 3603948 3604285 -85900268 + L2 LINE L2 2914 3272 0 2141 95 3 3 chr17 3604304 3604600 -85899953 - AluSx SINE Alu -16 296 1 2216 88 7 3 chr17 3604815 3605111 -85899442 - AluSg SINE Alu -13 297 1 240 237 246 26 chr17 3605893 3606007 -85898546 - MER5A DNA MER1_type 0 189 51 2224 102 0 0 chr17 3606040 3606343 -85898210 + AluSx SINE Alu 1 303 -9 735 266 58 0 chr17 3608391 3608579 -85895974 + MIR SINE MIR 43 241 -21 268 300 14 0 chr17 3610864 3610934 -85893619 - MIR3 SINE MIR -51 157 87 335 283 52 38 chr17 3611296 3611490 -85893063 - MIR SINE MIR -51 211 18 217 257 206 37 chr17 3611517 3611653 -85892900 - L2 LINE L2 -2 3270 3112 2344 89 0 3 chr17 3612018 3612331 -85892222 + AluSq SINE Alu 2 313 0 2331 76 10 0 chr17 3612725 3613028 -85891525 + AluSx SINE Alu 1 306 -6 442 191 12 12 chr17 3613512 3613596 -85890957 + MER20 DNA MER1_type 64 147 -72 1780 147 7 3 chr17 3613596 3613882 -85890671 + AluJo SINE Alu 1 287 -25 2217 98 3 3 chr17 3614101 3614407 -85890146 - AluSp SINE Alu -7 306 1 657 209 0 0 chr17 3617656 3617809 -85886744 + (CA)n Simple_repeat Simple_repeat 1 153 0 1922 71 61 46 chr17 3619864 3620167 -85884386 + AluY SINE Alu 1 307 0 414 130 0 0 chr17 3620308 3620377 -85884176 + L1MC4 LINE L1 7475 7543 -499 1674 162 47 0 chr17 3620384 3620681 -85883872 + AluJb SINE Alu 1 311 -1 1824 179 12 66 chr17 3620700 3621279 -85883274 + L1MB5 LINE L1 5099 5659 -525 2089 113 0 19 chr17 3621279 3621598 -85882955 + AluSq SINE Alu 1 313 0 1824 179 12 66 chr17 3621598 3621649 -85882904 + L1MB5 LINE L1 5659 5711 -473 307 109 31 47 chr17 3621650 3621714 -85882839 - AluSq SINE Alu -1 301 239 1128 144 0 28 chr17 3621714 3621894 -85882659 - AluSq SINE Alu -137 176 2 1139 186 4 30 chr17 3621897 3622133 -85882420 + L1MB5 LINE L1 5730 5959 -215 1463 81 5 10 chr17 3622133 3622331 -85882222 - AluSx SINE Alu -115 197 1 605 213 20 25 chr17 3622373 3622542 -85882011 + MLT1B LTR MaLR 166 342 -36 22 35 0 0 chr17 3623974 3624003 -85880550 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 3624086 3624115 -85880438 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2220 60 50 10 chr17 3624265 3624565 -85879988 - AluSx SINE Alu 0 312 1 325 330 54 0 chr17 3625419 3625531 -85879022 - MER5A DNA MER1_type -9 180 63 433 333 128 27 chr17 3625557 3625854 -85878699 + L2 LINE L2 2986 3312 -1 1254 179 0 48 chr17 3626749 3626874 -85877679 + AluJo SINE Alu 1 130 -182 480 18 0 0 chr17 3626874 3626931 -85877622 + (CA)n Simple_repeat Simple_repeat 2 58 0 1254 179 0 48 chr17 3626931 3626949 -85877604 + AluJo SINE Alu 130 147 -165 1784 139 17 10 chr17 3626949 3627237 -85877316 + AluJo SINE Alu 1 290 -22 1254 179 0 48 chr17 3627237 3627343 -85877210 + AluJo SINE Alu 147 239 -73 2005 119 0 0 chr17 3627361 3627785 -85876768 + AluSg SINE Alu 2 425 0 288 263 105 26 chr17 3627791 3627905 -85876648 - MER112 DNA MER1_type -136 124 2 2245 91 0 0 chr17 3628056 3628352 -85876201 + AluSg SINE Alu 1 296 -14 1651 181 24 0 chr17 3628424 3628717 -85875836 + MSTB LTR MaLR 1 300 -126 1339 101 105 5 chr17 3628941 3629150 -85875403 - MER30 DNA MER1_type 0 230 1 2257 96 3 6 chr17 3629215 3629527 -85875026 + AluSp SINE Alu 3 313 0 1871 96 0 76 chr17 3629556 3629857 -85874696 - AluSx SINE Alu -4 308 31 4409 88 189 23 chr17 3629857 3630565 -85873988 + LTR12 LTR ERV1 1 826 0 1517 165 9 71 chr17 3630990 3631312 -85873241 + AluJo SINE Alu 1 302 -10 2377 76 0 13 chr17 3631586 3631903 -85872650 + AluSp SINE Alu 1 313 0 2166 109 3 3 chr17 3632496 3632800 -85871753 + AluSp SINE Alu 1 304 -9 1666 165 0 26 chr17 3633572 3633732 -85870821 - AluJb SINE Alu -17 295 145 2107 110 3 3 chr17 3633732 3634024 -85870529 - AluSc SINE Alu -17 292 1 1666 165 0 26 chr17 3634024 3634166 -85870387 - AluJb SINE Alu -167 145 1 1774 85 0 0 chr17 3634442 3634677 -85869876 - AluSc SINE Alu -70 239 5 692 236 109 0 chr17 3634677 3634906 -85869647 + Charlie4a DNA MER1_type 159 412 -96 2518 56 0 0 chr17 3635548 3635850 -85868703 + AluY SINE Alu 1 302 -9 228 296 0 0 chr17 3636361 3636415 -85868138 + L1ME LINE L1 5529 5582 -539 1990 100 0 0 chr17 3636716 3636987 -85867566 - AluSx SINE Alu -8 304 34 546 175 133 33 chr17 3637271 3637391 -85867162 + FLAM_A SINE Alu 1 132 -1 2052 85 14 11 chr17 3637398 3637716 -85866837 + AluSg SINE Alu 1 319 0 2068 123 0 0 chr17 3637913 3638206 -85866347 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr17 3638206 3638228 -85866325 + AT_rich Low_complexity Low_complexity 1 22 0 2028 137 7 0 chr17 3638414 3638720 -85865833 + AluSx SINE Alu 1 308 -4 1082 104 0 31 chr17 3639136 3639158 -85865395 - AluSg/x SINE Alu -8 304 283 2266 83 6 6 chr17 3639158 3639470 -85865083 - AluSx SINE Alu 0 312 1 201 39 0 0 chr17 3639473 3639499 -85865054 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1082 104 0 31 chr17 3639499 3639635 -85864918 - AluSg/x SINE Alu -31 281 147 655 328 94 55 chr17 3640318 3640443 -85864110 + L1M4 LINE L1 4156 4275 -1871 2167 71 14 10 chr17 3640443 3640737 -85863816 + AluSx SINE Alu 1 295 -17 655 328 94 55 chr17 3640737 3640864 -85863689 + L1M4 LINE L1 4275 4396 -1750 1535 171 34 13 chr17 3640864 3641162 -85863391 + AluJo SINE Alu 1 304 -8 655 328 94 55 chr17 3641162 3641252 -85863301 + L1M4 LINE L1 4396 4481 -1665 2286 103 3 0 chr17 3641252 3641563 -85862990 + AluSp SINE Alu 2 313 0 655 328 94 55 chr17 3641563 3641721 -85862832 + L1M4 LINE L1 4481 4631 -1515 2308 72 0 0 chr17 3641721 3642012 -85862541 - AluY SINE Alu -20 291 1 2379 77 0 0 chr17 3642014 3642311 -85862242 - AluSc SINE Alu -12 297 1 655 328 94 55 chr17 3642311 3642386 -85862167 + L1M4 LINE L1 4631 4760 -1386 1353 178 15 37 chr17 3643370 3643640 -85860913 + AluJo SINE Alu 15 278 -34 2091 85 0 51 chr17 3643660 3643976 -85860577 + AluSg SINE Alu 1 300 -10 268 320 13 0 chr17 3645424 3645499 -85859054 + L3 LINE CR1 1481 1556 -21 474 310 58 65 chr17 3645931 3646192 -85858361 + MLT1L LTR MaLR 136 394 -221 2134 117 0 13 chr17 3646730 3647046 -85857507 + AluSx SINE Alu 1 312 0 1949 116 7 3 chr17 3647496 3647807 -85856746 - AluSx SINE Alu 0 312 1 2204 103 0 3 chr17 3648361 3648662 -85855891 - AluSx SINE Alu -12 300 1 1972 145 0 0 chr17 3648718 3649008 -85855545 - AluJb SINE Alu -22 290 1 2005 135 0 19 chr17 3649040 3649351 -85855202 - AluJo SINE Alu -3 309 5 225 265 0 0 chr17 3649491 3649540 -85855013 - L2 LINE L2 -243 3070 3022 1248 146 5 36 chr17 3649541 3649675 -85854878 + AluSx SINE Alu 1 129 -183 2148 62 47 0 chr17 3649675 3649950 -85854603 + AluSp SINE Alu 1 287 -26 190 0 0 0 chr17 3649950 3649971 -85854582 + (GAAAA)n Simple_repeat Simple_repeat 3 150 0 2453 65 3 0 chr17 3649977 3650285 -85854268 + AluSx SINE Alu 1 309 -3 1063 311 36 60 chr17 3650303 3651055 -85853498 - L2 LINE L2 -312 3001 2266 861 102 0 8 chr17 3654324 3654442 -85850111 + FLAM_A SINE Alu 1 117 -16 2150 90 0 29 chr17 3654496 3654807 -85849746 - AluSg SINE Alu -8 302 1 2472 65 0 0 chr17 3655168 3655476 -85849077 - AluY SINE Alu -3 308 1 816 226 6 0 chr17 3655982 3656141 -85848412 - AluJb SINE Alu -13 299 140 2350 94 3 0 chr17 3656146 3656454 -85848099 - AluSx SINE Alu -3 309 1 2202 98 0 25 chr17 3656531 3656847 -85847706 + AluSx SINE Alu 1 308 -4 2087 112 3 0 chr17 3657390 3657676 -85846877 - AluSx SINE Alu -25 287 1 1451 99 33 5 chr17 3657677 3657888 -85846665 - L1PA10 LINE L1 -13 6155 5939 2190 75 4 0 chr17 3657955 3658286 -85846267 + AluSg1 SINE Alu 1 332 0 791 187 79 30 chr17 3658361 3658564 -85845989 - MER20 DNA MER1_type -1 218 6 2511 77 0 0 chr17 3659144 3659454 -85845099 - AluSx SINE Alu -2 310 1 2219 108 0 10 chr17 3659603 3659909 -85844644 + AluSx SINE Alu 1 303 -9 286 319 88 96 chr17 3660352 3660612 -85843941 - L2 LINE L2 -8 3264 3007 520 187 18 160 chr17 3660676 3660785 -85843768 - MER105 DNA DNA -13 191 68 2261 103 3 3 chr17 3660785 3661097 -85843456 - AluSq SINE Alu -1 312 1 520 187 18 160 chr17 3661097 3661128 -85843425 - MER105 DNA DNA -136 68 34 2135 193 159 48 chr17 3661128 3661227 -85843326 - LTR65 LTR ERV1 0 669 582 2190 86 4 0 chr17 3661227 3661529 -85843024 - AluSx SINE Alu 0 307 5 2135 193 159 48 chr17 3661529 3661878 -85842675 - LTR65 LTR ERV1 -87 582 134 2433 59 0 10 chr17 3661878 3662185 -85842368 - AluY SINE Alu -7 304 1 2135 193 159 48 chr17 3662185 3662336 -85842217 - LTR65 LTR ERV1 -535 134 1 520 187 18 160 chr17 3662336 3662413 -85842140 - MER105 DNA DNA -170 34 4 1529 123 11 84 chr17 3662835 3662975 -85841578 - AluJb SINE Alu -49 263 153 2383 76 3 0 chr17 3662975 3663279 -85841274 - AluSp SINE Alu -8 305 1 1529 123 11 84 chr17 3663279 3663422 -85841131 - AluJb SINE Alu -159 153 1 469 248 142 0 chr17 3663554 3663695 -85840858 - MIR SINE MIR -1 261 101 2043 101 4 0 chr17 3663695 3663973 -85840580 + AluSx SINE Alu 22 300 -12 1067 127 7 0 chr17 3663973 3664146 -85840407 + AluSq SINE Alu 134 307 0 274 333 51 0 chr17 3664487 3664604 -85839949 + L3 LINE CR1 1308 1430 -147 401 21 0 0 chr17 3664605 3664653 -85839900 - AluY SINE Alu -265 48 1 254 309 107 98 chr17 3664715 3664824 -85839729 - L2 LINE L2 -636 2678 2572 2212 117 3 0 chr17 3664824 3665133 -85839420 + AluSx SINE Alu 1 310 -2 254 309 107 98 chr17 3665133 3665443 -85839110 - L2 LINE L2 -742 2572 2255 2120 84 0 0 chr17 3666006 3666281 -85838272 - AluSg SINE Alu -35 275 1 864 246 72 0 chr17 3666354 3666549 -85838004 + MER3 DNA MER1_type 1 209 0 726 277 179 14 chr17 3666704 3667244 -85837309 + L2 LINE L2 2667 3313 0 2191 117 3 0 chr17 3668179 3668488 -85836065 - AluSx SINE Alu -2 310 1 2506 29 3 32 chr17 3668883 3669198 -85835355 - AluY SINE Alu -5 306 1 2108 148 41 35 chr17 3669501 3669606 -85834947 + L1MC4 LINE L1 7378 7481 -561 2266 97 3 0 chr17 3669606 3669904 -85834649 + AluSq SINE Alu 1 299 -14 2108 148 41 35 chr17 3669904 3670259 -85834294 + L1MC4 LINE L1 7481 7841 -201 1252 121 0 0 chr17 3670267 3670440 -85834113 - AluSg/x SINE Alu -14 298 126 2116 109 0 34 chr17 3670440 3670762 -85833791 - AluSx SINE Alu -1 311 1 205 264 58 58 chr17 3671136 3671223 -85833330 + MIR3 SINE MIR 107 193 -15 2516 74 0 0 chr17 3671502 3671813 -85832740 - AluSx SINE Alu -1 311 1 810 222 0 30 chr17 3671815 3671982 -85832571 - FRAM SINE Alu 0 166 5 2211 103 6 13 chr17 3672248 3672559 -85831994 - AluSx SINE Alu -3 309 1 2224 102 0 0 chr17 3673149 3673452 -85831101 - AluSq SINE Alu -10 303 1 239 330 52 0 chr17 3674094 3674209 -85830344 - MIR3 SINE MIR -7 201 81 2289 83 6 10 chr17 3674256 3674568 -85829985 - AluY SINE Alu 0 311 1 1150 38 0 0 chr17 3674570 3674701 -85829852 - AluY SINE Alu -180 131 1 2239 70 27 10 chr17 3675120 3675419 -85829134 - AluY SINE Alu -7 304 1 1079 277 177 43 chr17 3675932 3676115 -85828438 - L2 LINE L2 -1 3312 3155 2149 94 3 3 chr17 3676115 3676414 -85828139 + AluSx SINE Alu 1 299 -13 1079 277 177 43 chr17 3676414 3677063 -85827490 - L2 LINE L2 -158 3155 2311 2427 50 7 0 chr17 3677063 3677361 -85827192 - AluY SINE Alu -10 301 2 1079 277 177 43 chr17 3677361 3677520 -85827033 - L2 LINE L2 -1002 2311 2175 2242 112 0 0 chr17 3677546 3677850 -85826703 + AluSg SINE Alu 1 304 -6 572 307 146 0 chr17 3677869 3678061 -85826492 - MIR SINE MIR -35 227 8 420 278 26 57 chr17 3680054 3680233 -85824320 + MIR SINE MIR 14 192 -61 2093 126 17 0 chr17 3680284 3680578 -85823975 + AluSx SINE Alu 1 299 -13 2167 111 7 0 chr17 3680579 3680885 -85823668 + AluSp SINE Alu 2 309 -4 219 231 102 37 chr17 3681466 3681574 -85822979 + MIR3 SINE MIR 40 154 -54 1773 117 53 0 chr17 3682075 3682363 -85822190 - AluSx SINE Alu 0 307 6 303 187 0 133 chr17 3682660 3682863 -85821690 + C-rich Low_complexity Low_complexity 4 179 0 569 113 0 0 chr17 3683413 3683493 -85821060 + AluSg/x SINE Alu 219 298 -14 274 221 253 0 chr17 3683825 3683920 -85820633 + MIR SINE MIR 21 139 -69 187 286 143 0 chr17 3683901 3683978 -85820575 + L2 LINE L2 3137 3224 -48 * 258 359 18 41 chr17 3683980 3684035 -85820518 - MIR3 SINE MIR -2 206 151 1783 152 13 32 chr17 3684035 3684212 -85820341 - AluSx SINE Alu -2 310 140 2132 118 0 10 chr17 3684212 3684516 -85820037 - AluSx SINE Alu -11 301 1 1783 152 13 32 chr17 3684516 3684654 -85819899 - AluSx SINE Alu -172 140 1 258 359 18 41 chr17 3684654 3684768 -85819785 - MIR3 SINE MIR -57 151 41 325 230 62 120 chr17 3684982 3685291 -85819262 + L2 LINE L2 2747 3052 -220 219 258 72 41 chr17 3685787 3685884 -85818669 - MIR SINE MIR -87 121 22 570 232 14 162 chr17 3685949 3686055 -85818498 - MIR SINE MIR 0 262 142 1108 148 0 0 chr17 3686055 3686217 -85818336 - FRAM SINE Alu 0 166 5 570 232 14 162 chr17 3686217 3686249 -85818304 - MIR SINE MIR -120 142 107 2145 112 3 16 chr17 3686249 3686563 -85817990 - AluSx SINE Alu -2 310 1 570 232 14 162 chr17 3686563 3686655 -85817898 - MIR SINE MIR -155 107 78 2473 62 3 0 chr17 3686655 3686959 -85817594 + AluY SINE Alu 1 305 -6 570 232 14 162 chr17 3686959 3687010 -85817543 - MIR SINE MIR -184 78 21 507 254 125 19 chr17 3687599 3687954 -85816599 + MLT1H1 LTR MaLR 86 547 -8 2200 117 3 3 chr17 3688241 3688550 -85816003 - AluSx SINE Alu -3 309 1 274 208 20 89 chr17 3688613 3688714 -85815839 + MIR3 SINE MIR 81 174 -34 336 111 0 0 chr17 3688828 3688882 -85815671 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2405 68 3 10 chr17 3690400 3690708 -85813845 - AluY SINE Alu -4 307 2 2027 134 7 0 chr17 3690712 3691003 -85813550 - AluSx SINE Alu -19 293 1 288 0 0 0 chr17 3691117 3691149 -85813404 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 239 310 0 0 chr17 3691155 3691213 -85813340 - L2 LINE L2 -19 3294 3237 2179 92 0 0 chr17 3692225 3692528 -85812025 + AluSx SINE Alu 1 303 0 208 281 24 85 chr17 3692659 3692741 -85811812 + L3 LINE CR1 1377 1453 -124 2571 43 0 0 chr17 3692878 3693181 -85811372 + AluY SINE Alu 1 303 -8 559 288 179 11 chr17 3693361 3693729 -85810824 + L2 LINE L2 1818 2247 -1067 1181 119 0 21 chr17 3693731 3693925 -85810628 + MLT1D LTR MaLR 1 190 -315 1113 45 0 0 chr17 3693934 3694088 -85810465 + GSAT Satellite centromeric 32 185 -32 * 1215 189 124 40 chr17 3694083 3694336 -85810217 + MLT1D LTR MaLR 154 384 -121 1912 107 0 21 chr17 3694336 3694616 -85809937 + AluSq SINE Alu 1 274 -39 410 0 0 20 chr17 3694620 3694671 -85809882 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1215 189 124 40 chr17 3694671 3694735 -85809818 + MLT1D LTR MaLR 386 503 -2 555 273 23 11 chr17 3694735 3694911 -85809642 + L2 LINE L2 2355 2532 -782 2268 104 0 3 chr17 3694911 3695220 -85809333 - AluSq SINE Alu -5 308 1 1050 96 0 0 chr17 3695220 3695355 -85809198 - AluSq/x SINE Alu -177 135 1 1297 183 48 8 chr17 3695451 3695702 -85808851 - AluJb SINE Alu -17 295 35 704 176 155 10 chr17 3695705 3695888 -85808665 + MLT1D LTR MaLR 245 436 -69 1735 154 0 8 chr17 3695956 3696222 -85808331 - AluJb SINE Alu -20 292 29 589 312 159 3 chr17 3696404 3696718 -85807835 + L2 LINE L2 2945 3307 -6 257 310 20 40 chr17 3697206 3697306 -85807247 - MER91C DNA MER1_type -3 137 40 2095 114 0 29 chr17 3697507 3697822 -85806731 - AluSx SINE Alu -6 306 1 2248 102 0 31 chr17 3697937 3698259 -85806294 - AluSx SINE Alu 0 312 1 737 289 120 25 chr17 3698955 3699356 -85805197 + L1ME3A LINE L1 5691 6129 -41 2336 77 13 10 chr17 3699356 3699666 -85804887 - AluSq SINE Alu -2 311 1 360 319 128 57 chr17 3699844 3700227 -85804326 + L2 LINE L2 2849 3258 -14 261 0 0 0 chr17 3700228 3700257 -85804296 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2388 81 7 0 chr17 3700297 3700592 -85803961 - AluSx SINE Alu -14 298 2 3562 209 28 42 chr17 3700690 3701039 -85803514 - MER21B LTR ERV1 -49 814 462 2201 90 24 3 chr17 3701039 3701329 -85803224 + AluSg SINE Alu 1 296 -14 3562 209 28 42 chr17 3701329 3701792 -85802761 - MER21B LTR ERV1 -401 462 13 2285 103 0 25 chr17 3702324 3702644 -85801909 + AluSx SINE Alu 1 312 0 1597 151 6 71 chr17 3702790 3703101 -85801452 - AluJb SINE Alu -17 295 5 385 319 128 21 chr17 3703223 3703321 -85801232 - L1ME LINE L1 -360 5804 5718 2205 98 0 35 chr17 3703321 3703637 -85800916 - AluSx SINE Alu -6 306 2 385 319 128 21 chr17 3703637 3703865 -85800688 - L1ME LINE L1 -446 5718 5437 2604 63 0 0 chr17 3703923 3704225 -85800328 - AluSx SINE Alu -9 303 2 406 318 65 15 chr17 3704230 3704431 -85800122 - MIR SINE MIR -43 219 9 1532 151 12 15 chr17 3704469 3704728 -85799825 - AluJb SINE Alu -54 258 1 277 129 71 14 chr17 3704731 3704801 -85799752 + L1ME4a LINE L1 6047 6120 -1 2585 40 0 7 chr17 3704827 3705131 -85799422 - AluY SINE Alu -9 302 1 185 265 41 0 chr17 3705875 3705924 -85798629 + L2 LINE L2 3148 3198 -74 698 209 39 34 chr17 3705935 3706141 -85798412 + L1ME2 LINE L1 5648 5854 -310 2065 117 0 47 chr17 3706173 3706490 -85798063 + AluSx SINE Alu 1 302 -10 386 193 67 44 chr17 3706522 3706657 -85797896 - L1MC4 LINE L1 -933 7109 6972 544 346 29 8 chr17 3706660 3706903 -85797650 + L1MEc LINE L1 51 298 -6098 916 219 45 20 chr17 3706913 3707159 -85797394 + L1ME2 LINE L1 5903 6154 -10 427 220 47 127 chr17 3707176 3707232 -85797321 + L1MC5 LINE L1 7708 7767 -194 2120 116 0 28 chr17 3707232 3707551 -85797002 - AluSx SINE Alu -1 311 2 427 220 47 127 chr17 3707551 3707730 -85796823 + L1MC5 LINE L1 7767 7924 -37 227 322 44 22 chr17 3707745 3707835 -85796718 - L1MC/D LINE L1 -2219 5589 5498 2287 65 0 77 chr17 3707898 3708084 -85796469 - AluSp SINE Alu -14 299 147 2347 79 26 3 chr17 3708084 3708387 -85796166 - AluY SINE Alu -1 310 1 2287 65 0 77 chr17 3708387 3708524 -85796029 - AluSp SINE Alu -166 147 1 722 81 0 10 chr17 3708524 3708623 -85795930 - AluSp SINE Alu -178 135 38 1794 155 0 20 chr17 3708625 3708922 -85795631 - AluJb SINE Alu -9 303 13 1923 111 36 33 chr17 3709272 3709578 -85794975 - AluSx SINE Alu -1 311 5 2321 94 3 10 chr17 3710058 3710366 -85794187 - AluSx SINE Alu -6 306 1 363 293 8 0 chr17 3710729 3710862 -85793691 + L1M4 LINE L1 2419 2552 -3594 1312 130 0 0 chr17 3710900 3711085 -85793468 + AluSq SINE Alu 1 185 -128 1206 101 0 0 chr17 3711187 3711336 -85793217 - AluSg SINE Alu -161 149 1 1850 155 28 17 chr17 3711741 3712032 -85792521 + AluJb SINE Alu 5 298 -14 253 322 106 28 chr17 3712395 3712575 -85791978 + MIR SINE MIR 5 198 -64 316 322 93 57 chr17 3713402 3713703 -85790850 + HAL1b LINE L1 901 1212 -136 1860 169 0 32 chr17 3713762 3714076 -85790477 + AluJb SINE Alu 1 304 -8 359 257 112 14 chr17 3714114 3714328 -85790225 + L1M4 LINE L1 5140 5374 -772 1374 97 0 6 chr17 3714375 3714551 -85790002 + AluSq SINE Alu 3 177 -136 488 260 46 62 chr17 3714688 3714807 -85789746 - L1M4 LINE L1 -2687 3459 3340 2657 36 0 0 chr17 3714807 3715108 -85789445 - AluY SINE Alu -10 301 1 488 260 46 62 chr17 3715108 3715437 -85789116 - L1M4 LINE L1 -2806 3340 3007 803 39 10 0 chr17 3715437 3715540 -85789013 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 1995 128 4 0 chr17 3715542 3715816 -85788737 - AluSx SINE Alu -37 275 1 1703 168 0 70 chr17 3715819 3716147 -85788406 - AluJb SINE Alu -1 311 7 488 260 46 62 chr17 3716147 3716313 -85788240 - L1M4 LINE L1 -3142 3004 2675 2508 69 0 0 chr17 3716314 3716605 -85787948 + AluSc SINE Alu 5 295 -14 2025 93 0 76 chr17 3716729 3717031 -85787522 - AluSx SINE Alu -3 309 31 4535 89 136 33 chr17 3717031 3717780 -85786773 + LTR12 LTR ERV1 1 826 0 1629 165 9 71 chr17 3718206 3718528 -85786025 + AluJo SINE Alu 1 302 -10 2463 80 0 13 chr17 3718802 3719115 -85785438 + AluSp SINE Alu 1 309 -4 2269 112 3 3 chr17 3719708 3720012 -85784541 + AluSp SINE Alu 1 304 -9 1793 165 0 26 chr17 3720784 3720944 -85783609 - AluJb SINE Alu -17 295 145 2223 113 3 3 chr17 3720944 3721236 -85783317 - AluSc SINE Alu -17 292 1 1793 165 0 26 chr17 3721236 3721378 -85783175 - AluJb SINE Alu -167 145 1 1878 85 0 0 chr17 3721654 3721889 -85782664 - AluSc SINE Alu -70 239 5 697 236 109 0 chr17 3721889 3722118 -85782435 + Charlie4a DNA MER1_type 159 412 -96 2683 43 0 0 chr17 3722760 3723059 -85781494 + AluY SINE Alu 1 299 -12 180 0 0 0 chr17 3723059 3723079 -85781474 + (TA)n Simple_repeat Simple_repeat 2 21 0 555 259 0 0 chr17 3724027 3724368 -85780185 + (CA)n Simple_repeat Simple_repeat 1 341 0 249 266 0 0 chr17 3724383 3724477 -85780076 + (CA)n Simple_repeat Simple_repeat 1 94 0 181 268 0 0 chr17 3724755 3724796 -85779757 + L2 LINE L2 3206 3246 -26 318 227 0 23 chr17 3725386 3725474 -85779079 - AluJ/FRAM SINE Alu 0 302 217 * 331 170 86 0 chr17 3725433 3725517 -85779036 + AluJ/FRAM SINE Alu 221 302 0 415 261 15 46 chr17 3725544 3725674 -85778879 + L1MC5 LINE L1 6995 7120 -841 280 109 18 18 chr17 3725686 3725741 -85778812 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2177 133 0 3 chr17 3725745 3726054 -85778499 - AluSx SINE Alu -4 308 1 273 260 75 48 chr17 3726101 3726247 -85778306 + L1MC4 LINE L1 7100 7249 -793 237 318 103 0 chr17 3726251 3726358 -85778195 + L1MC4 LINE L1 7323 7440 -602 281 286 26 0 chr17 3726363 3726440 -85778113 - MER5A DNA MER1_type -107 82 4 1972 116 3 27 chr17 3726482 3726773 -85777780 + AluSx SINE Alu 1 286 -26 192 40 0 0 chr17 3726773 3726798 -85777755 + (CA)n Simple_repeat Simple_repeat 2 26 0 287 279 79 92 chr17 3726891 3727143 -85777410 + L1MC5 LINE L1 7340 7594 -367 2583 50 0 3 chr17 3727143 3727442 -85777111 + AluY SINE Alu 1 298 -13 287 279 79 92 chr17 3727442 3727558 -85776995 + L1MC5 LINE L1 7594 7704 -257 2300 109 0 0 chr17 3727558 3727852 -85776701 - AluSx SINE Alu -18 294 1 287 279 79 92 chr17 3727852 3727926 -85776627 + L1MC5 LINE L1 7704 7777 -184 462 253 136 6 chr17 3727927 3728089 -85776464 - MER5A DNA MER1_type -3 186 4 2209 94 16 10 chr17 3728381 3728689 -85775864 - AluSx SINE Alu -2 310 1 2199 109 3 7 chr17 3729320 3729623 -85774930 - AluSg SINE Alu -8 302 1 680 172 0 0 chr17 3729623 3729739 -85774814 - AluSg/x SINE Alu -14 296 181 1283 117 11 0 chr17 3729939 3730118 -85774435 - AluY SINE Alu -130 181 1 2477 83 0 3 chr17 3730246 3730548 -85774005 - AluSg SINE Alu -9 301 1 915 120 0 35 chr17 3730549 3730691 -85773862 - AluJo SINE Alu -175 137 1 199 333 23 0 chr17 3730732 3730819 -85773734 + L2 LINE L2 3157 3245 -27 181 268 0 0 chr17 3731726 3731767 -85772786 - L2 LINE L2 -26 3246 3206 249 266 0 0 chr17 3732046 3732140 -85772413 + (TG)n Simple_repeat Simple_repeat 1 94 0 627 253 0 0 chr17 3732155 3732504 -85772049 + (TG)n Simple_repeat Simple_repeat 1 349 0 216 0 0 0 chr17 3733451 3733475 -85771078 + (TA)n Simple_repeat Simple_repeat 2 25 0 2660 47 0 0 chr17 3733475 3733771 -85770782 - AluY SINE Alu -15 296 1 2310 98 0 0 chr17 3733771 3734067 -85770486 - AluSx SINE Alu -16 296 1 204 265 47 47 chr17 3734704 3734874 -85769679 + L2 LINE L2 2868 3037 -235 281 275 75 50 chr17 3735825 3735985 -85768568 + MIR3 SINE MIR 30 193 -15 1936 119 29 4 chr17 3736153 3736456 -85768097 + AluSx SINE Alu 1 310 0 672 232 7 13 chr17 3738368 3738523 -85766030 + MER3 DNA MER1_type 3 156 -53 1292 234 68 45 chr17 3739532 3740045 -85764508 + L1MC4 LINE L1 7516 8040 -2 26 0 0 0 chr17 3740046 3740072 -85764481 + AT_rich Low_complexity Low_complexity 1 26 0 2259 65 3 20 chr17 3740124 3740417 -85764136 + AluY SINE Alu 1 288 -23 448 215 25 66 chr17 3740417 3740538 -85764015 + FLAM_A SINE Alu 11 126 -16 2042 128 7 10 chr17 3740599 3740897 -85763656 + AluSx SINE Alu 1 297 -15 302 296 181 10 chr17 3741067 3741266 -85763287 - MIR SINE MIR -18 244 12 2404 81 10 0 chr17 3741303 3741601 -85762952 - AluSx SINE Alu -11 301 1 570 226 96 7 chr17 3741674 3741820 -85762733 + MLT1A2 LTR MaLR 1 159 -215 315 278 10 21 chr17 3742126 3742223 -85762330 - MIR3 SINE MIR -20 188 93 2419 77 0 3 chr17 3742426 3742723 -85761830 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 3743063 3743083 -85761470 + (A)n Simple_repeat Simple_repeat 1 20 0 191 287 84 28 chr17 3743872 3744015 -85760538 - L2 LINE L2 0 3313 3163 448 304 37 12 chr17 3744121 3744282 -85760271 - L2 LINE L2 -20 3252 3088 620 117 11 0 chr17 3745091 3745185 -85759368 - FRAM SINE Alu -24 152 58 225 330 10 20 chr17 3745185 3745285 -85759268 - L2 LINE L2 -529 2785 2687 460 92 0 0 chr17 3745285 3745350 -85759203 + L1MB8 LINE L1 5377 5441 -737 856 128 7 54 chr17 3745350 3745498 -85759055 + FLAM_C SINE Alu 1 141 -2 3122 163 82 43 chr17 3745501 3745772 -85758781 + L1MB8 LINE L1 5428 5687 -491 2214 104 3 10 chr17 3745772 3746081 -85758472 + AluSq SINE Alu 1 307 -6 3122 163 82 43 chr17 3746081 3746531 -85758022 + L1MB8 LINE L1 5687 6177 -1 22 0 0 0 chr17 3748586 3748608 -85755945 + AT_rich Low_complexity Low_complexity 1 22 0 333 129 32 0 chr17 3750098 3750160 -85754393 - AluSq SINE Alu 0 302 239 1199 99 0 12 chr17 3750160 3750322 -85754231 - AluSq SINE Alu -153 160 1 248 319 44 44 chr17 3751637 3751750 -85752803 + L2 LINE L2 2981 3093 -179 259 292 15 0 chr17 3751764 3751829 -85752724 + L2 LINE L2 3245 3310 -3 1226 194 116 47 chr17 3751943 3752263 -85752290 - MER2 DNA MER2_type -2 342 1 2182 60 21 32 chr17 3753130 3753415 -85751138 + AluY SINE Alu 14 295 -16 289 274 89 32 chr17 3753544 3753668 -85750885 + L1ME4a LINE L1 5389 5519 -602 2472 72 3 3 chr17 3753717 3754023 -85750530 + AluY SINE Alu 3 308 -3 367 259 147 45 chr17 3754119 3754331 -85750222 + L1ME4a LINE L1 5718 5974 -147 231 36 0 0 chr17 3754331 3754359 -85750194 + (CA)n Simple_repeat Simple_repeat 1 28 0 367 259 147 45 chr17 3754359 3754459 -85750094 + L1ME4a LINE L1 5974 6062 -59 303 140 0 0 chr17 3754861 3754911 -85749642 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2680 213 79 20 chr17 3755177 3755648 -85748905 - MER82 DNA MER2_type -6 647 131 2463 72 0 10 chr17 3755648 3755955 -85748598 + AluY SINE Alu 1 304 -7 2680 213 79 20 chr17 3755955 3756088 -85748465 - MER82 DNA MER2_type -522 131 7 1808 171 0 33 chr17 3756328 3756632 -85747921 - AluJb SINE Alu -14 298 5 2202 101 3 10 chr17 3757045 3757343 -85747210 + AluSg SINE Alu 1 296 -14 2319 98 0 0 chr17 3757813 3758110 -85746443 - AluSx SINE Alu -5 307 11 2865 199 155 57 chr17 3759238 3759431 -85745122 + L1MC4 LINE L1 6813 6986 -1056 2228 74 3 101 chr17 3759431 3759768 -85744785 + AluSc SINE Alu 1 304 -5 2865 199 155 57 chr17 3759768 3759986 -85744567 + L1MC4 LINE L1 6986 7181 -861 826 162 0 29 chr17 3759986 3760122 -85744431 - FLAM_C SINE Alu -1 132 1 2865 199 155 57 chr17 3760122 3760710 -85743843 + L1MC4 LINE L1 7181 7911 -131 330 132 0 0 chr17 3760725 3760778 -85743775 + (CATA)n Simple_repeat Simple_repeat 2 54 0 317 167 50 0 chr17 3760778 3760838 -85743715 - L1MCa LINE L1 -4358 2068 2006 182 114 0 29 chr17 3760839 3760874 -85743679 + (CATA)n Simple_repeat Simple_repeat 4 37 0 322 227 15 0 chr17 3760874 3760940 -85743613 - L1MCa LINE L1 -4363 2063 1997 218 295 16 0 chr17 3761208 3761269 -85743284 - L3 LINE CR1 -5 1572 1511 22 0 0 0 chr17 3761465 3761487 -85743066 + AT_rich Low_complexity Low_complexity 1 22 0 819 243 128 16 chr17 3761590 3761841 -85742712 + L2 LINE L2 3035 3313 0 1592 177 57 13 chr17 3762764 3763163 -85741390 + AluJo SINE Alu 1 412 0 2153 39 19 8 chr17 3763163 3763423 -85741130 + AluY SINE Alu 33 295 -16 286 171 89 0 chr17 3763423 3763539 -85741014 + GA-rich Low_complexity Low_complexity 9 138 0 325 372 16 0 chr17 3764028 3764157 -85740396 + MIR3 SINE MIR 60 190 -18 235 170 0 0 chr17 3764254 3764301 -85740252 - L1MA10 LINE L1 -10 6324 6278 2246 129 0 0 chr17 3764309 3764618 -85739935 - AluSx SINE Alu -3 309 1 882 220 6 6 chr17 3764620 3764802 -85739751 + MER58A DNA MER1_type 43 224 0 234 312 35 28 chr17 3766033 3766174 -85738379 + L1ME4a LINE L1 4561 4702 -1444 383 217 28 32 chr17 3766219 3766398 -85738155 + L1M2 LINE L1 5283 5463 -693 404 296 165 53 chr17 3766575 3766933 -85737620 + L1ME4a LINE L1 5620 6017 -104 2266 83 10 0 chr17 3766994 3767282 -85737271 - AluSc SINE Alu -18 291 1 2474 82 3 0 chr17 3767305 3767610 -85736943 - AluSp SINE Alu -7 306 1 2302 95 7 3 chr17 3767691 3767997 -85736556 + AluY SINE Alu 1 307 -4 1804 84 33 18 chr17 3768144 3768301 -85736252 + L1MA1 LINE L1 6026 6190 -112 2371 109 0 0 chr17 3768301 3768603 -85735950 + AluSx SINE Alu 1 302 -10 1804 84 33 18 chr17 3768603 3768718 -85735835 + L1MA1 LINE L1 6190 6302 0 2401 74 10 3 chr17 3768751 3769060 -85735493 + AluY SINE Alu 1 311 0 21 100 0 0 chr17 3769173 3769243 -85735310 + AT_rich Low_complexity Low_complexity 1 70 0 1925 154 0 10 chr17 3769371 3769663 -85734890 + AluJo SINE Alu 5 293 -19 942 153 35 0 chr17 3769663 3769807 -85734746 - AluJb SINE Alu -162 150 2 810 135 15 60 chr17 3769924 3770057 -85734496 + FLAM_C SINE Alu 1 127 -16 1570 109 9 5 chr17 3770893 3771104 -85733449 + AluSp SINE Alu 1 212 -101 318 130 0 0 chr17 3771104 3771158 -85733395 + FLAM SINE Alu 78 131 -2 285 366 92 7 chr17 3771251 3771404 -85733149 + L3 LINE CR1 355 520 -1057 808 299 267 20 chr17 3771434 3772172 -85732381 + L3 LINE CR1 648 1567 -10 706 274 101 21 chr17 3772283 3772520 -85732033 + MIR SINE MIR 7 262 0 816 285 37 32 chr17 3772666 3772772 -85731781 - MIR SINE MIR -1 261 157 2487 92 0 0 chr17 3772772 3773077 -85731476 + AluSg SINE Alu 1 305 -5 816 285 37 32 chr17 3773077 3773216 -85731337 - MIR SINE MIR -105 157 15 240 242 0 32 chr17 3773222 3773268 -85731285 + MER5B DNA MER1_type 1 46 -132 2181 133 3 0 chr17 3773268 3773577 -85730976 + AluSg SINE Alu 1 310 0 240 242 0 32 chr17 3773577 3773592 -85730961 + MER5B DNA MER1_type 46 60 -118 2195 85 32 0 chr17 3773616 3773899 -85730654 + AluSg SINE Alu 1 292 -18 1767 100 60 8 chr17 3773910 3774160 -85730393 + AluSg SINE Alu 45 307 -3 29 0 0 0 chr17 3774379 3774408 -85730145 + AT_rich Low_complexity Low_complexity 1 29 0 320 282 137 3 chr17 3774409 3774526 -85730027 - MIR SINE MIR -65 143 55 644 278 44 8 chr17 3775033 3775285 -85729268 + MIR SINE MIR 2 262 0 2336 99 0 0 chr17 3775754 3776047 -85728506 - AluSx SINE Alu -19 293 1 208 205 26 0 chr17 3776213 3776252 -85728301 + MIR SINE MIR 40 79 -129 335 200 0 0 chr17 3776823 3776883 -85727670 + L2 LINE L2 3213 3272 0 251 330 22 11 chr17 3776967 3777058 -85727495 - MIR SINE MIR -115 147 56 2257 87 35 0 chr17 3777385 3777674 -85726879 - AluSc SINE Alu -10 299 1 1183 155 0 0 chr17 3778074 3778248 -85726305 + AluJb SINE Alu 125 298 -14 2050 129 0 0 chr17 3778547 3778826 -85725727 + AluSx SINE Alu 6 284 -28 1716 166 8 0 chr17 3779078 3779343 -85725210 - AluJb SINE Alu -45 267 1 1580 186 43 7 chr17 3779632 3779933 -85724620 - AluJo SINE Alu 0 312 1 2140 124 10 3 chr17 3779936 3780242 -85724311 - AluSx SINE Alu -3 309 2 336 331 23 39 chr17 3780577 3780707 -85723846 + MIR SINE MIR 3 130 -132 187 253 203 0 chr17 3780657 3780736 -85723817 + L2 LINE L2 2019 2113 -1201 * 206 220 231 22 chr17 3780877 3780968 -85723585 + L2 LINE L2 3192 3301 -12 1911 100 4 0 chr17 3780968 3781217 -85723336 + AluSp SINE Alu 1 250 -63 946 44 9 0 chr17 3781219 3781352 -85723201 + AluSp/q SINE Alu 169 302 0 251 183 366 0 chr17 3781468 3781539 -85723014 - FLAM_A SINE Alu -23 110 14 591 226 242 0 chr17 3782933 3783119 -85721434 - MIR SINE MIR -2 260 30 184 271 294 0 chr17 3783218 3783303 -85721250 - MIR SINE MIR -63 145 36 1039 121 0 0 chr17 3783441 3783685 -85720868 - FLAM_C SINE Alu 0 244 1 247 254 127 87 chr17 3783687 3783813 -85720740 + MIR3 SINE MIR 58 188 -20 542 208 82 60 chr17 3783843 3784026 -85720527 + MIR SINE MIR 20 206 -56 2206 84 49 0 chr17 3784171 3784456 -85720097 + AluSg SINE Alu 1 299 -11 180 0 0 0 chr17 3784487 3784507 -85720046 + (TG)n Simple_repeat Simple_repeat 2 21 0 627 253 78 34 chr17 3784958 3785247 -85719306 - LTR37B LTR ERV1 0 458 139 2670 43 0 0 chr17 3785259 3785561 -85718992 - AluY SINE Alu -9 302 1 2577 70 0 10 chr17 3785566 3785880 -85718673 - AluY SINE Alu 0 311 1 2143 104 0 7 chr17 3786062 3786349 -85718204 - AluSg1 SINE Alu -23 286 2 328 320 77 37 chr17 3786369 3786641 -85717912 - L2 LINE L2 -1267 2047 1765 2071 135 0 0 chr17 3786673 3786981 -85717572 - AluSx SINE Alu 0 308 1 2169 95 48 7 chr17 3787374 3787668 -85716885 - AluSx SINE Alu -6 306 1 209 271 0 17 chr17 3787695 3787754 -85716799 + CT-rich Low_complexity Low_complexity 1 58 0 2183 90 4 0 chr17 3787755 3788033 -85716520 - AluSg SINE Alu -31 279 1 507 311 167 37 chr17 3788048 3788722 -85715831 + L2 LINE L2 1928 2513 -759 1926 163 10 0 chr17 3788722 3789028 -85715525 - AluJb SINE Alu -1 311 3 507 311 167 37 chr17 3789028 3789552 -85715001 + L2 LINE L2 2513 3272 0 2402 66 0 7 chr17 3789687 3789975 -85714578 + AluSg SINE Alu 10 295 -15 237 33 0 0 chr17 3789976 3790006 -85714547 + (TCTCCC)n Simple_repeat Simple_repeat 2 31 0 10935 30 16 87 chr17 3790006 3791489 -85713064 + SVA Other Other 1 1378 -8 537 115 29 132 chr17 3791502 3791653 -85712900 + L1MC3 LINE L1 5891 6056 -1729 2165 105 0 39 chr17 3791653 3791825 -85712728 - AluSg SINE Alu -16 294 138 2360 70 0 3 chr17 3791825 3792111 -85712442 - AluY SINE Alu -26 285 1 2165 105 0 39 chr17 3792111 3792244 -85712309 - AluSg SINE Alu -172 138 1 537 115 29 132 chr17 3792244 3792506 -85712047 + L1MC3 LINE L1 6056 6343 -1442 2155 104 14 0 chr17 3792506 3792795 -85711758 - AluSx SINE Alu -19 293 1 537 115 29 132 chr17 3792795 3792847 -85711706 + L1MC3 LINE L1 6343 6399 -1386 2596 54 0 0 chr17 3792847 3793143 -85711410 - AluY SINE Alu -15 296 1 537 115 29 132 chr17 3793143 3793160 -85711393 + L1MC3 LINE L1 6399 7783 -2 562 189 9 9 chr17 3793174 3793280 -85711273 + MER5B DNA MER1_type 46 151 -27 207 313 0 0 chr17 3794305 3794353 -85710200 - L2 LINE L2 -18 3254 3207 3904 183 55 31 chr17 3794390 3794469 -85710084 + MER21B LTR ERV1 6 82 -781 2571 56 0 3 chr17 3794469 3794773 -85709780 - AluY SINE Alu -8 303 1 3904 183 55 31 chr17 3794773 3795454 -85709099 + MER21B LTR ERV1 82 790 -73 2391 56 42 0 chr17 3795454 3795740 -85708813 - AluY SINE Alu -13 298 1 3904 183 55 31 chr17 3795740 3795810 -85708743 + MER21B LTR ERV1 790 857 -6 2275 70 20 20 chr17 3795827 3796127 -85708426 + AluSx SINE Alu 5 304 -8 364 284 63 0 chr17 3796141 3796236 -85708317 - MIR SINE MIR -115 147 47 2104 128 0 23 chr17 3799032 3799336 -85705217 - AluJb SINE Alu -15 297 1 2281 105 3 10 chr17 3799613 3799917 -85704636 + AluSq SINE Alu 1 302 -11 713 176 0 17 chr17 3799992 3800111 -85704442 + FLAM_C SINE Alu 2 118 -25 2107 116 17 0 chr17 3800349 3800641 -85703912 - AluJo SINE Alu -9 303 7 2523 55 0 0 chr17 3800652 3800945 -85703608 - AluY SINE Alu -18 293 1 439 141 0 0 chr17 3800945 3801016 -85703537 - MER94 DNA DNA -53 81 11 813 293 112 49 chr17 3803018 3803123 -85701430 - L2 LINE L2 0 3313 3216 2207 91 0 7 chr17 3803123 3803420 -85701133 - AluSq SINE Alu -18 295 1 813 293 112 49 chr17 3803420 3804014 -85700539 - L2 LINE L2 -97 3216 2564 243 263 66 13 chr17 3804926 3805002 -85699551 + L2 LINE L2 3192 3271 -1 2243 90 0 3 chr17 3805051 3805350 -85699203 - AluY SINE Alu -11 300 3 2355 57 37 0 chr17 3805356 3805656 -85698897 - AluY SINE Alu 0 311 1 298 293 40 0 chr17 3806608 3806707 -85697846 - MIR SINE MIR -59 149 47 2500 51 0 0 chr17 3806768 3807064 -85697489 - AluY SINE Alu -15 296 1 2462 64 0 6 chr17 3807701 3808055 -85696498 - AluY SINE Alu 0 352 1 2080 82 89 0 chr17 3808063 3808345 -85696208 - AluSx SINE Alu -5 307 1 181 286 0 0 chr17 3809162 3809204 -85695349 + L2 LINE L2 3272 3313 0 288 380 39 8 chr17 3809969 3810098 -85694455 - L2 LINE L2 0 3272 3140 926 251 25 4 chr17 3810492 3810771 -85693782 + L1MC4 LINE L1 7460 7744 -298 2105 119 0 3 chr17 3810777 3811072 -85693481 - AluSx SINE Alu -18 294 1 1036 96 0 7 chr17 3811072 3811208 -85693345 - AluSq/x SINE Alu -178 135 1 2502 52 0 3 chr17 3811239 3811546 -85693007 + AluY SINE Alu 1 306 -5 528 177 3 9 chr17 3811546 3811670 -85692883 + L1MC4 LINE L1 7670 7785 0 1624 168 45 17 chr17 3811691 3811982 -85692571 - AluJo SINE Alu -13 299 1 185 341 57 23 chr17 3812335 3812423 -85692130 + L2 LINE L2 3168 3258 -14 214 238 0 63 chr17 3813012 3813075 -85691478 - MIR SINE MIR -130 78 20 2419 83 0 0 chr17 3813145 3813457 -85691096 - AluSx SINE Alu 0 312 1 254 316 13 0 chr17 3813964 3814040 -85690513 + G-rich Low_complexity Low_complexity 1 77 0 194 100 0 0 chr17 3814078 3814108 -85690445 - L2 LINE L2 -20 3293 3264 418 270 91 102 chr17 3814179 3814368 -85690185 + L2 LINE L2 2232 2417 -897 191 35 0 35 chr17 3814368 3814397 -85690156 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 418 270 91 102 chr17 3814397 3814581 -85689972 + L2 LINE L2 2417 2601 -713 208 254 12 23 chr17 3814938 3815035 -85689518 + MIR SINE MIR 60 153 -61 231 36 0 0 chr17 3815180 3815208 -85689345 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2256 106 0 0 chr17 3815210 3815513 -85689040 - AluSq SINE Alu -10 303 1 463 312 60 54 chr17 3815634 3816258 -85688295 + L2 LINE L2 2553 3211 -61 535 263 103 4 chr17 3817110 3817342 -85687211 - MER112 DNA MER1_type -1 259 5 387 286 7 57 chr17 3817538 3817678 -85686875 + MIR SINE MIR 56 188 -74 354 262 23 78 chr17 3818235 3818423 -85686130 - MIR3 SINE MIR -67 141 15 578 190 0 0 chr17 3818513 3818613 -85685940 - MIR SINE MIR -52 210 111 267 351 52 22 chr17 3820020 3820154 -85684399 - L3 LINE CR1 -18 1559 1422 190 119 119 0 chr17 3820154 3820196 -85684357 - L3 LINE CR1 -123 1454 1408 339 352 132 20 chr17 3821375 3821679 -85682874 + L3 LINE CR1 1176 1513 -64 2118 111 0 0 chr17 3822759 3823039 -85681514 + AluSx SINE Alu 11 290 -22 219 286 102 20 chr17 3823512 3823610 -85680943 + MIR SINE MIR 32 137 -71 382 311 107 0 chr17 3824293 3824415 -85680138 + L2 LINE L2 3179 3313 0 181 270 63 16 chr17 3824420 3824483 -85680070 - MIR3 SINE MIR -37 171 106 195 279 211 0 chr17 3824688 3824792 -85679761 - MIR SINE MIR -60 148 23 468 333 92 9 chr17 3824799 3825027 -85679526 + MIR SINE MIR 16 262 0 198 0 0 0 chr17 3825313 3825335 -85679218 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 304 78 48 chr17 3826826 3827056 -85677497 + L2 LINE L2 2246 2482 -832 * 280 317 208 5 chr17 3827050 3827252 -85677301 + L2 LINE L2 2817 3059 -213 1300 267 32 32 chr17 3827566 3828001 -85676552 - L2 LINE L2 -13 3300 2866 315 296 26 17 chr17 3828047 3828162 -85676391 - L2 LINE L2 -189 3083 2968 216 351 53 0 chr17 3828260 3828374 -85676179 - L2 LINE L2 -561 2753 2634 21 0 0 0 chr17 3828872 3828893 -85675660 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 3829359 3829381 -85675172 + GC_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr17 3829397 3829426 -85675127 + (CCCCG)n Simple_repeat Simple_repeat 4 32 0 30 77 0 0 chr17 3829456 3829521 -85675032 + GC_rich Low_complexity Low_complexity 1 65 0 529 341 38 8 chr17 3830147 3830411 -85674142 + L2 LINE L2 2442 2713 -601 545 278 157 39 chr17 3830461 3830742 -85673811 + L2 LINE L2 2957 3270 -2 887 252 44 53 chr17 3830757 3831078 -85673475 - MLT1J LTR MaLR -191 320 3 296 275 110 16 chr17 3831112 3831171 -85673382 - MIR SINE MIR -28 234 182 800 156 0 30 chr17 3831171 3831306 -85673247 + FLAM_C SINE Alu 3 133 0 296 275 110 16 chr17 3831306 3831415 -85673138 - MIR SINE MIR -80 182 42 316 367 43 31 chr17 3831435 3831759 -85672794 - L2 LINE L2 -1266 2048 1721 781 166 52 140 chr17 3831989 3832063 -85672490 - MER3 DNA MER1_type 0 209 130 2127 83 0 28 chr17 3832063 3832353 -85672200 + AluSx SINE Alu 11 292 -20 781 166 52 140 chr17 3832353 3832507 -85672046 - MER3 DNA MER1_type -79 130 1 299 273 26 0 chr17 3832887 3832964 -85671589 - MIR3 SINE MIR -22 186 108 455 305 43 7 chr17 3833505 3833646 -85670907 - MER5A DNA MER1_type -6 183 38 919 241 50 0 chr17 3833671 3833870 -85670683 + MER3 DNA MER1_type 1 209 0 885 196 25 6 chr17 3835603 3835766 -85668787 - FRAM SINE Alu 0 166 1 2227 99 3 0 chr17 3836218 3836520 -85668033 + AluSx SINE Alu 1 303 -9 2179 120 0 3 chr17 3836570 3836878 -85667675 + AluSx SINE Alu 1 307 -5 360 339 83 32 chr17 3837044 3837262 -85667291 + L2 LINE L2 3084 3312 -1 2448 67 0 0 chr17 3837466 3837766 -85666787 - AluY SINE Alu -11 300 1 633 230 14 0 chr17 3837872 3838020 -85666533 + MER58B DNA MER1_type 190 339 -2 551 360 5 5 chr17 3838214 3838417 -85666136 - MIR SINE MIR -24 238 36 1141 119 11 17 chr17 3838515 3838692 -85665861 - AluSg/x SINE Alu -3 307 132 2139 106 7 7 chr17 3838692 3838995 -85665558 - AluSx SINE Alu -9 303 1 2216 116 0 3 chr17 3838997 3839308 -85665245 - AluSx SINE Alu -2 310 1 2169 95 3 0 chr17 3841992 3842277 -85662276 + AluSq SINE Alu 28 313 0 806 271 50 39 chr17 3842385 3842536 -85662017 + MIR SINE MIR 2 159 -103 2224 82 0 7 chr17 3842536 3842830 -85661723 - AluSc SINE Alu -17 292 1 806 271 50 39 chr17 3842830 3842936 -85661617 + MIR SINE MIR 159 262 0 1692 240 52 26 chr17 3843150 3843608 -85660945 + MLT1K LTR MaLR 4 473 -3 342 0 0 0 chr17 3843690 3843728 -85660825 + (TG)n Simple_repeat Simple_repeat 2 39 0 2133 104 10 10 chr17 3844678 3844986 -85659567 + AluSq SINE Alu 1 308 -5 382 320 51 13 chr17 3845192 3845351 -85659202 + MIR SINE MIR 21 190 -61 2236 82 0 3 chr17 3845435 3845729 -85658824 - AluSg SINE Alu -17 293 1 837 136 8 0 chr17 3845964 3846096 -85658457 + AluSq/x SINE Alu 1 133 -179 245 317 19 10 chr17 3846098 3846202 -85658351 - L2 LINE L2 -12 3301 3197 292 207 0 0 chr17 3846202 3846260 -85658293 - Tigger5 DNA MER2_type 0 2323 2266 238 171 0 0 chr17 3846326 3846367 -85658186 - Tigger5 DNA MER2_type 0 2323 2283 2409 81 0 0 chr17 3846367 3846674 -85657879 - AluSx SINE Alu -5 307 1 219 374 53 16 chr17 3846718 3846905 -85657648 + L2 LINE L2 2334 2527 -787 528 216 0 26 chr17 3847207 3847323 -85657230 + L2 LINE L2 3199 3311 -2 346 309 24 48 chr17 3847357 3847370 -85657183 + Charlie8 DNA MER1_type 69 81 -260 1740 177 0 16 chr17 3847370 3847687 -85656866 - AluJb SINE Alu 0 312 1 222 37 0 0 chr17 3847691 3847718 -85656835 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 346 309 24 48 chr17 3847718 3847867 -85656686 + Charlie8 DNA MER1_type 84 232 -109 1180 249 3 21 chr17 3848242 3848531 -85656022 + MLT1K LTR MaLR 142 425 -163 2381 93 0 0 chr17 3848718 3849030 -85655523 - AluSx SINE Alu 0 312 1 215 88 0 0 chr17 3849425 3849459 -85655094 + L2 LINE L2 3025 3058 -214 191 294 0 0 chr17 3849462 3849513 -85655040 - L3 LINE CR1 -111 1466 1416 2126 101 20 3 chr17 3849530 3849826 -85654727 - AluSx SINE Alu -11 301 1 245 232 29 14 chr17 3850589 3850658 -85653895 + MIR SINE MIR 29 98 -164 205 121 0 0 chr17 3850748 3850781 -85653772 + L3 LINE CR1 1423 1455 -122 364 272 18 9 chr17 3851115 3851229 -85653324 + MIR3 SINE MIR 15 129 -79 386 184 53 35 chr17 3853460 3853574 -85650979 + MIR SINE MIR 37 152 -110 340 244 106 32 chr17 3853756 3853879 -85650674 - MIR3 SINE MIR -21 187 56 354 146 11 34 chr17 3854390 3854479 -85650074 + GA-rich Low_complexity Low_complexity 1 87 0 846 99 10 48 chr17 3854486 3854788 -85649765 + (GGGA)n Simple_repeat Simple_repeat 1 290 0 417 39 0 0 chr17 3854824 3854875 -85649678 + (TCC)n Simple_repeat Simple_repeat 1 51 0 407 229 48 9 chr17 3855308 3855413 -85649140 - MIR SINE MIR -79 183 75 1782 169 0 43 chr17 3856111 3856255 -85648298 + AluJb SINE Alu 1 150 -162 1731 153 3 3 chr17 3856255 3856566 -85647987 + AluSq SINE Alu 4 314 0 1782 169 0 43 chr17 3856566 3856746 -85647807 + AluJb SINE Alu 150 312 0 2383 87 0 3 chr17 3856904 3857252 -85647301 - AluSg SINE Alu 0 347 1 307 250 0 22 chr17 3857264 3857284 -85647269 - L1MA10 LINE L1 0 6334 6315 674 314 98 15 chr17 3857284 3857609 -85646944 - L1ME1 LINE L1 -9 6157 5806 194 246 0 49 chr17 3858153 3858214 -85646339 + MIR SINE MIR 88 145 -63 239 319 0 0 chr17 3858439 3858508 -85646045 + MER45A DNA AcHobo 5 73 -105 247 286 0 0 chr17 3858697 3858760 -85645793 - L1ME3 LINE L1 -7 6155 6093 2359 92 0 0 chr17 3858764 3859069 -85645484 - AluSx SINE Alu -7 305 1 382 202 61 0 chr17 3859075 3859174 -85645379 + MER45A DNA AcHobo 74 178 0 1705 122 54 14 chr17 3859655 3859959 -85644594 + AluSx SINE Alu 1 312 0 2148 90 4 0 chr17 3862990 3863268 -85641285 - AluSx SINE Alu -33 279 1 252 199 14 96 chr17 3866551 3866697 -85637856 + (CCCCAG)n Simple_repeat Simple_repeat 1 134 0 2183 80 28 0 chr17 3867265 3867554 -85636999 + AluSx SINE Alu 1 297 -15 2588 46 0 0 chr17 3867914 3868220 -85636333 - AluY SINE Alu -5 306 1 2073 110 0 0 chr17 3868517 3868843 -85635710 - AluSx SINE Alu 0 326 1 1754 169 0 3 chr17 3868843 3869133 -85635420 - AluJb SINE Alu -17 295 7 2346 50 4 0 chr17 3869399 3869701 -85634852 + AluSx SINE Alu 1 303 0 2241 90 3 0 chr17 3869857 3870156 -85634397 + AluY SINE Alu 3 302 -9 2320 89 0 0 chr17 3870312 3870616 -85633937 - AluSx SINE Alu -1 311 8 1594 176 53 7 chr17 3870626 3870910 -85633643 - AluJb SINE Alu -15 297 1 2221 106 3 0 chr17 3870919 3871222 -85633331 - AluSx SINE Alu -8 304 1 462 228 139 15 chr17 3871726 3871928 -85632625 + MLT1K LTR MaLR 30 256 -332 2330 76 0 0 chr17 3871935 3872226 -85632327 - AluSx SINE Alu -10 302 12 664 133 20 0 chr17 3872226 3872324 -85632229 - AluS SINE Alu -213 100 1 236 277 38 107 chr17 3872324 3872483 -85632070 + MLT1K LTR MaLR 249 396 -192 339 25 0 0 chr17 3873121 3873161 -85631392 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 269 32 11 chr17 3873404 3873497 -85631056 + (CA)n Simple_repeat Simple_repeat 1 95 0 205 370 11 0 chr17 3874280 3874372 -85630181 + G-rich Low_complexity Low_complexity 3 95 0 2136 108 0 0 chr17 3874551 3874839 -85629714 + AluSx SINE Alu 1 288 -24 2099 110 31 0 chr17 3874946 3875236 -85629317 - AluSx SINE Alu -13 299 1 1889 165 3 0 chr17 3875285 3875582 -85628971 + AluJo SINE Alu 1 298 -14 798 233 75 43 chr17 3875806 3875906 -85628647 + L1ME2 LINE L1 5724 5819 -345 2440 69 0 7 chr17 3875906 3876212 -85628341 + AluSc SINE Alu 1 304 -5 798 233 75 43 chr17 3876212 3876433 -85628120 + L1ME2 LINE L1 5819 6055 -109 213 65 0 0 chr17 3876433 3876464 -85628089 + (T)n Simple_repeat Simple_repeat 1 31 0 665 106 0 0 chr17 3876474 3876559 -85627994 - AluJ/FLAM SINE Alu -226 86 2 383 286 0 0 chr17 3876566 3876671 -85627882 + L1ME2 LINE L1 6050 6154 -10 2217 106 0 0 chr17 3876906 3877207 -85627346 - AluSx SINE Alu -11 301 1 1778 116 64 4 chr17 3879405 3879706 -85624847 + AluSx SINE Alu 1 317 0 504 350 86 0 chr17 3880360 3880663 -85623890 + L2 LINE L2 2439 2767 -547 25 65 0 0 chr17 3881393 3881439 -85623114 + GC_rich Low_complexity Low_complexity 1 46 0 224 255 255 20 chr17 3881829 3881931 -85622622 + MIR SINE MIR 20 145 -63 270 229 55 73 chr17 3882067 3882176 -85622377 - L3 LINE CR1 -101 1476 1370 2213 88 14 7 chr17 3882365 3882661 -85621892 + AluSc SINE Alu 1 298 -11 2030 107 3 27 chr17 3882669 3882969 -85621584 + AluSx SINE Alu 1 293 -19 437 313 78 6 chr17 3884341 3884520 -85620033 + L2 LINE L2 3094 3285 -28 908 142 15 0 chr17 3884984 3885118 -85619435 - AluJo SINE Alu -176 136 1 2329 98 3 0 chr17 3885246 3885553 -85619000 + AluSx SINE Alu 1 308 -4 871 205 35 57 chr17 3885970 3886199 -85618354 + MIR SINE MIR 39 262 0 1887 131 0 0 chr17 3886279 3886546 -85618007 + AluSq SINE Alu 1 267 -46 2263 70 0 7 chr17 3886562 3886847 -85617706 - AluSq SINE Alu -14 299 17 825 124 0 8 chr17 3887463 3887631 -85616922 + AluSg/x SINE Alu 175 312 0 753 152 42 55 chr17 3888356 3888495 -85616058 + MER5A DNA MER1_type 8 146 -43 1846 98 58 4 chr17 3888495 3888769 -85615784 - AluSx SINE Alu -23 289 1 753 152 42 55 chr17 3888769 3888794 -85615759 + MER5A DNA MER1_type 146 170 -19 956 187 36 67 chr17 3888933 3888993 -85615560 + MER20 DNA MER1_type 1 61 -158 1834 161 0 7 chr17 3888993 3889291 -85615262 - AluJo SINE Alu -16 296 1 956 187 36 67 chr17 3889291 3889455 -85615098 + MER20 DNA MER1_type 61 218 -1 274 242 30 106 chr17 3890346 3890478 -85614075 - MIR3 SINE MIR -10 198 77 2373 61 10 0 chr17 3890897 3891193 -85613360 - AluSg SINE Alu -11 299 1 226 344 23 42 chr17 3891212 3891441 -85613112 - MIR SINE MIR -8 254 30 216 310 56 0 chr17 3891510 3891581 -85612972 + MER5A DNA MER1_type 9 83 -106 2232 81 0 0 chr17 3892269 3892581 -85611972 - AluSx SINE Alu 0 312 1 366 184 11 35 chr17 3892661 3892748 -85611805 + MLT1I LTR MaLR 3 87 -322 553 247 117 7 chr17 3892823 3892977 -85611576 + MER3 DNA MER1_type 4 127 -82 494 286 47 52 chr17 3892988 3893201 -85611352 + MLT1I LTR MaLR 197 408 -1 598 290 65 9 chr17 3893540 3893754 -85610799 - MIR SINE MIR -30 232 7 693 288 64 0 chr17 3894462 3894681 -85609872 + MIR SINE MIR 8 240 -22 400 221 106 35 chr17 3894701 3894814 -85609739 + L2 LINE L2 3191 3311 -2 257 370 31 0 chr17 3894812 3894939 -85609614 + L2 LINE L2 2715 2845 -469 * 367 148 0 0 chr17 3895007 3895068 -85609485 - L1MA7 LINE L1 -3 6288 6228 416 230 29 10 chr17 3895095 3895199 -85609354 - L1MC4 LINE L1 -1339 6983 1996 382 246 0 26 chr17 3895178 3895293 -85609260 - L1MC4 LINE L1 -1339 6983 1995 * 320 259 25 25 chr17 3895223 3895298 -85609255 + L1MC3 LINE L1 6571 6646 -1134 * 2009 113 3 27 chr17 3895298 3895598 -85608955 - AluSx SINE Alu -19 293 1 340 367 136 0 chr17 3897016 3897280 -85607273 + L1MC/D LINE L1 5366 5665 -2143 506 337 16 11 chr17 3898165 3898349 -85606204 - MIR SINE MIR -55 207 23 253 260 0 14 chr17 3898601 3898674 -85605879 - MIR SINE MIR -122 140 69 * 945 243 20 0 chr17 3898645 3898847 -85605706 + MIR SINE MIR 57 262 0 39 22 0 0 chr17 3900523 3900569 -85603984 + GC_rich Low_complexity Low_complexity 1 46 0 26 50 0 0 chr17 3900757 3900797 -85603756 + GC_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr17 3900834 3900859 -85603694 + GC_rich Low_complexity Low_complexity 1 25 0 33 0 0 0 chr17 3900883 3900916 -85603637 + GC_rich Low_complexity Low_complexity 1 33 0 262 0 0 0 chr17 3902249 3902278 -85602275 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2018 108 3 46 chr17 3902278 3902601 -85601952 - AluSx SINE Alu -3 309 1 1675 149 0 81 chr17 3902604 3902925 -85601628 - AluJb SINE Alu -17 295 1 200 379 47 18 chr17 3902933 3903102 -85601451 - L3 LINE CR1 -818 759 586 1604 83 0 0 chr17 3903806 3904048 -85600505 - AluSg/x SINE Alu 0 320 79 629 139 0 170 chr17 3904049 3904214 -85600339 - AluSq/x SINE Alu -175 137 1 231 344 122 27 chr17 3904327 3904548 -85600005 - L2 LINE L2 -429 2885 2644 254 198 176 11 chr17 3904661 3904752 -85599801 - MIR SINE MIR -18 244 139 245 200 123 15 chr17 3904752 3904817 -85599736 + MER45B DNA AcHobo 1 72 -968 746 190 0 7 chr17 3904818 3904955 -85599598 - FLAM_A SINE Alu -6 136 1 4354 195 34 35 chr17 3904955 3904995 -85599558 + MER45B DNA AcHobo 63 102 -1479 2279 85 0 3 chr17 3904995 3905300 -85599253 - AluSx SINE Alu -8 304 1 4354 195 34 35 chr17 3905300 3906061 -85598492 + MER45B DNA AcHobo 102 862 -719 2191 93 0 26 chr17 3906061 3906371 -85598182 + AluSx SINE Alu 1 302 -10 4354 195 34 35 chr17 3906371 3906474 -85598079 + MER45B DNA AcHobo 862 969 -612 1568 176 3 37 chr17 3906474 3906797 -85597756 - AluJo SINE Alu 0 312 1 4354 195 34 35 chr17 3906797 3906868 -85597685 + MER45B DNA AcHobo 969 1039 -1 258 283 186 18 chr17 3906869 3906982 -85597571 - MIR SINE MIR -116 146 15 199 302 39 31 chr17 3907520 3907649 -85596904 - MIR3 SINE MIR -28 180 51 2277 96 0 0 chr17 3907989 3908292 -85596261 + AluSq SINE Alu 1 303 -10 1726 149 33 10 chr17 3908301 3908602 -85595951 + AluJo SINE Alu 5 312 0 231 225 225 17 chr17 3908772 3908892 -85595661 - L2 LINE L2 -192 3080 2936 324 261 85 8 chr17 3910211 3910341 -85594212 + L2 LINE L2 2876 3015 -257 227 380 52 18 chr17 3911056 3911285 -85593268 + L2 LINE L2 2826 3062 -210 205 359 19 28 chr17 3911465 3911571 -85592982 + L2 LINE L2 3208 3312 -1 2175 107 3 10 chr17 3911741 3911914 -85592639 - AluSq SINE Alu -6 307 135 2471 68 0 0 chr17 3911914 3912221 -85592332 - AluY SINE Alu -4 307 1 2175 107 3 10 chr17 3912221 3912356 -85592197 - AluSq SINE Alu -178 135 1 261 284 34 23 chr17 3914062 3914150 -85590403 - MIR SINE MIR -170 92 4 348 286 95 8 chr17 3914349 3914479 -85590074 + MIR SINE MIR 42 181 -60 2217 79 3 13 chr17 3914504 3914809 -85589744 + AluSx SINE Alu 1 302 -10 615 244 78 0 chr17 3915446 3915626 -85588927 + MIR SINE MIR 9 202 -60 694 252 172 64 chr17 3915707 3916084 -85588469 + MLT1L LTR MaLR 122 539 -76 866 230 0 0 chr17 3916085 3916263 -85588290 - AluSg/x SINE Alu -1 311 134 2199 106 0 3 chr17 3916287 3916589 -85587964 + AluSg SINE Alu 1 301 -9 1540 142 0 4 chr17 3916747 3916979 -85587574 - AluJo SINE Alu -81 231 1 588 261 6 24 chr17 3916979 3917144 -85587409 + MLT1K LTR MaLR 421 582 -6 301 276 38 0 chr17 3918036 3918141 -85586412 + MIR3 SINE MIR 85 193 -15 282 29 0 0 chr17 3918566 3918601 -85585952 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 2159 107 0 3 chr17 3918723 3919022 -85585531 - AluSx SINE Alu -14 298 1 2063 93 7 0 chr17 3919947 3920259 -85584294 + AluY SINE Alu 1 314 0 436 282 83 33 chr17 3920470 3920651 -85583902 + MLT1K LTR MaLR 396 585 -3 3673 105 57 0 chr17 3921156 3921316 -85583237 - MER41A LTR ERV1 0 554 405 2205 111 7 0 chr17 3921316 3921623 -85582930 - AluSg SINE Alu -1 309 1 3673 105 57 0 chr17 3921623 3921985 -85582568 - MER41A LTR ERV1 -149 405 2 2226 96 3 0 chr17 3922211 3922514 -85582039 - AluSp SINE Alu -9 304 1 700 177 51 162 chr17 3927314 3927843 -85576710 + Charlie1 DNA MER1_type 5 2755 -6 333 276 82 18 chr17 3928413 3928583 -85575970 + MIR3 SINE MIR 23 203 -5 996 174 38 136 chr17 3929359 3929675 -85574878 + AluY SINE Alu 11 295 -16 2186 104 0 19 chr17 3929746 3930062 -85574491 + AluSg SINE Alu 1 310 0 930 192 6 24 chr17 3930252 3930419 -85574134 + FRAM SINE Alu 3 166 0 1733 166 0 7 chr17 3930427 3930722 -85573831 + AluJb SINE Alu 1 293 -19 644 276 165 11 chr17 3931758 3932200 -85572353 + L1ME4a LINE L1 4061 4570 -1576 493 133 0 0 chr17 3932200 3932275 -85572278 + AluJ/FRAM SINE Alu 226 300 -12 581 309 76 12 chr17 3932279 3932609 -85571944 + L1ME4a LINE L1 4918 5268 -878 196 348 0 14 chr17 3933615 3933684 -85570869 - MIR SINE MIR -125 83 16 410 209 23 0 chr17 3934008 3934094 -85570459 - L2 LINE L2 -8 3264 3177 2500 38 0 0 chr17 3936404 3936695 -85567858 + AluY SINE Alu 1 291 -20 550 242 242 15 chr17 3936917 3937115 -85567438 - MIR SINE MIR -6 256 14 1068 168 89 5 chr17 3937430 3937632 -85566921 - AluJo SINE Alu -1 311 93 186 326 141 44 chr17 3938577 3938939 -85565614 - L2 LINE L2 -10 3262 2866 2151 93 3 0 chr17 3939505 3939794 -85564759 + AluSx SINE Alu 1 290 -22 181 205 26 0 chr17 3940174 3940213 -85564340 + L3 LINE CR1 1344 1383 -194 36 53 0 0 chr17 3942239 3942296 -85562257 + AT_rich Low_complexity Low_complexity 1 57 0 726 159 0 51 chr17 3942296 3942434 -85562119 - FLAM_A SINE Alu -1 132 2 1322 153 55 0 chr17 3942457 3942693 -85561860 - MER57A LTR ERV1 -25 378 130 397 276 173 50 chr17 3942715 3943018 -85561535 + MLT1J LTR MaLR 64 429 -82 5552 50 7 29 chr17 3943018 3943745 -85560808 - SVA Other Other 0 1386 676 397 276 173 50 chr17 3943745 3943840 -85560713 + MLT1J LTR MaLR 429 511 0 503 132 0 0 chr17 3944888 3944964 -85559589 - AluJo SINE Alu -11 301 226 1348 151 27 0 chr17 3945177 3945396 -85559157 - AluJo SINE Alu -87 225 1 273 287 20 10 chr17 3946309 3946410 -85558143 + L1ME4a LINE L1 5544 5645 -476 328 316 38 30 chr17 3946591 3946724 -85557829 + L1ME4a LINE L1 5935 6068 -53 216 328 119 6 chr17 3946745 3946922 -85557631 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3947663 3947695 -85556858 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 280 358 90 15 chr17 3947721 3948030 -85556523 + L2 LINE L2 2717 3056 -257 303 306 124 8 chr17 3948060 3948181 -85556372 + L2 LINE L2 3136 3270 -2 1514 187 0 39 chr17 3948297 3948602 -85555951 + AluJo SINE Alu 1 293 -19 36 53 0 0 chr17 3950612 3950669 -85553884 + AT_rich Low_complexity Low_complexity 1 57 0 726 159 0 51 chr17 3950669 3950807 -85553746 - FLAM_A SINE Alu -1 132 2 1322 153 55 0 chr17 3950830 3951066 -85553487 - MER57A LTR ERV1 -25 378 130 476 287 178 21 chr17 3951088 3951475 -85553078 + MLT1J LTR MaLR 64 511 0 503 132 0 0 chr17 3952523 3952599 -85551954 - AluJo SINE Alu -11 301 226 1416 151 27 0 chr17 3952812 3953031 -85551522 - AluJo SINE Alu -87 225 1 265 287 20 10 chr17 3953944 3954045 -85550508 + L1ME LINE L1 5544 5645 -476 186 299 124 11 chr17 3954380 3954557 -85549996 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3955298 3955330 -85549223 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 207 329 117 21 chr17 3955356 3955665 -85548888 + L2 LINE L2 2717 3056 -257 272 306 124 8 chr17 3955695 3955816 -85548737 + L2 LINE L2 3136 3270 -2 1560 190 0 39 chr17 3955932 3956237 -85548316 + AluJo SINE Alu 1 293 -19 2221 126 0 3 chr17 3956581 3956891 -85547662 - AluSx SINE Alu -3 309 1 2175 126 17 0 chr17 3957797 3958091 -85546462 + AluSx SINE Alu 1 299 -13 1608 254 44 45 chr17 3958103 3958630 -85545923 + L1MEc LINE L1 35 560 -5836 779 273 89 61 chr17 3958653 3958905 -85545648 + L1MEc LINE L1 1277 1520 -4876 2241 111 7 3 chr17 3958905 3959212 -85545341 - AluSq SINE Alu -5 308 1 779 273 89 61 chr17 3959212 3959519 -85545034 + L1MEc LINE L1 1520 1852 -4544 532 172 35 52 chr17 3959553 3959669 -85544884 - FLAM_C SINE Alu -18 115 2 2418 91 3 0 chr17 3959679 3959987 -85544566 - AluSq SINE Alu -4 309 1 1381 144 12 37 chr17 3959987 3960230 -85544323 - AluJo SINE Alu -10 302 66 501 202 0 40 chr17 3960248 3960347 -85544206 - FLAM_C SINE Alu -19 124 30 285 172 129 32 chr17 3960358 3960451 -85544102 - L1MEc LINE L1 -4258 2138 2037 745 212 109 0 chr17 3960457 3960650 -85543903 - L1MEc LINE L1 -4320 2076 1863 2016 133 7 7 chr17 3960659 3960959 -85543594 + AluSx SINE Alu 1 300 -12 633 150 150 33 chr17 3960962 3961115 -85543438 + L1MEc LINE L1 2229 2399 -3997 426 218 51 0 chr17 3961201 3961279 -85543274 - MER2 DNA MER2_type -262 83 2 1730 234 10 103 chr17 3961282 3962009 -85542544 + L1MEc LINE L1 2367 3160 -3055 2250 90 7 0 chr17 3962009 3962297 -85542256 + AluSq SINE Alu 22 311 -2 1730 234 10 103 chr17 3962297 3962308 -85542245 + L1MEc LINE L1 3160 3170 -3045 791 178 23 0 chr17 3962308 3962437 -85542116 + FLAM_C SINE Alu 2 133 0 1730 234 10 103 chr17 3962437 3962658 -85541895 + L1MEc LINE L1 3170 3362 -2853 272 157 0 39 chr17 3962766 3962817 -85541736 + Tigger5 DNA MER2_type 7 55 -2268 * 378 173 13 40 chr17 3962784 3962859 -85541694 + Tigger5 DNA MER2_type 2251 2323 0 308 111 0 0 chr17 3962876 3962921 -85541632 + L1ME3A LINE L1 4564 4608 -1538 725 136 183 8 chr17 3962934 3963127 -85541426 - AluJo SINE Alu -24 288 2 429 214 103 0 chr17 3963171 3963288 -85541265 + L1ME3A LINE L1 4633 4761 -1385 1047 107 0 0 chr17 3963289 3963420 -85541133 + AluSq/x SINE Alu 1 131 -181 2155 119 0 3 chr17 3963425 3963758 -85540795 + AluSx SINE Alu 1 332 0 756 220 62 5 chr17 3963759 3963968 -85540585 + L1ME3A LINE L1 4752 4972 -1174 2283 112 0 10 chr17 3965739 3966052 -85538501 - AluSg SINE Alu 0 310 1 268 209 80 92 chr17 3966951 3967114 -85537439 - L1ME4a LINE L1 -27 6094 5934 2033 139 0 7 chr17 3967118 3967412 -85537141 + AluJb SINE Alu 1 292 -20 186 191 0 0 chr17 3967416 3967458 -85537095 + (TATG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr17 3967461 3967486 -85537067 + AT_rich Low_complexity Low_complexity 1 25 0 1915 89 0 0 chr17 3968242 3968478 -85536075 + AluSq SINE Alu 23 258 -55 244 279 0 0 chr17 3968555 3968616 -85535937 + L1MC4 LINE L1 6460 6520 -1522 627 215 59 59 chr17 3968631 3968850 -85535703 - MER20 DNA MER1_type 0 219 1 2335 74 13 3 chr17 3968856 3969154 -85535399 + AluSq SINE Alu 1 301 -12 234 0 0 0 chr17 3969181 3969207 -85535346 + (CA)n Simple_repeat Simple_repeat 2 27 0 1250 200 216 0 chr17 3969245 3969550 -85535003 + L1MC4 LINE L1 6719 7089 -953 2074 234 55 26 chr17 3969551 3969953 -85534600 + L1MC4 LINE L1 7243 7671 -371 1717 188 10 10 chr17 3969953 3970262 -85534291 - AluJo SINE Alu -3 309 1 2074 234 55 26 chr17 3970262 3970475 -85534078 + L1MC4 LINE L1 7671 7876 -166 894 241 89 59 chr17 3970533 3970902 -85533651 + L1ME3A LINE L1 5492 5880 -290 2073 106 7 3 chr17 3970902 3971213 -85533340 + AluSx SINE Alu 1 312 0 894 241 89 59 chr17 3971213 3971306 -85533247 + L1ME3A LINE L1 5880 5969 -201 291 50 0 0 chr17 3971303 3971343 -85533210 - L1M4 LINE L1 -843 5303 5264 * 1896 132 7 7 chr17 3971559 3971872 -85532681 + AluSx SINE Alu 1 313 0 2633 46 0 3 chr17 3972017 3972320 -85532233 - AluY SINE Alu -9 302 1 716 229 171 28 chr17 3974150 3974577 -85529976 + L1MC4 LINE L1 7555 8042 0 2383 88 0 10 chr17 3975051 3975358 -85529195 - AluSx SINE Alu -8 304 1 417 254 131 60 chr17 3975390 3975673 -85528880 + L2 LINE L2 3010 3312 -1 487 193 0 96 chr17 3976261 3976396 -85528157 + L2 LINE L2 3132 3253 -19 2339 110 0 0 chr17 3976885 3977193 -85527360 - AluSc SINE Alu -1 308 1 2292 96 3 0 chr17 3977248 3977539 -85527014 + AluSx SINE Alu 1 292 -20 2442 97 0 0 chr17 3978569 3978879 -85525674 - AluY SINE Alu -1 310 1 1003 209 18 65 chr17 3979924 3980115 -85524438 + L1MC4 LINE L1 6820 7018 -1024 1896 166 7 0 chr17 3980115 3980411 -85524142 + AluJb SINE Alu 1 298 -14 2237 108 3 0 chr17 3980413 3980709 -85523844 + AluY SINE Alu 1 297 -14 1003 209 18 65 chr17 3980709 3980792 -85523761 + L1MC4 LINE L1 7019 7084 -958 1904 94 50 43 chr17 3981465 3981764 -85522789 - AluSg SINE Alu -9 301 1 659 184 98 90 chr17 3981853 3981982 -85522571 - MIR SINE MIR -25 237 103 1935 136 7 4 chr17 3981982 3982291 -85522262 + AluJb SINE Alu 1 310 0 659 184 98 90 chr17 3982291 3982394 -85522159 - MIR SINE MIR -159 103 2 22 0 0 0 chr17 3983279 3983301 -85521252 + AT_rich Low_complexity Low_complexity 1 22 0 318 261 28 115 chr17 3984051 3984180 -85520373 + L1MC5 LINE L1 7651 7743 -218 2181 101 17 0 chr17 3984180 3984468 -85520085 - AluSx SINE Alu -19 293 1 318 261 28 115 chr17 3984468 3984625 -85519928 + L1MC5 LINE L1 7743 7912 -49 34 0 0 0 chr17 3985302 3985336 -85519217 + AT_rich Low_complexity Low_complexity 1 34 0 1966 153 0 0 chr17 3985337 3985619 -85518934 + AluSx SINE Alu 1 282 -30 236 376 76 27 chr17 3987019 3987428 -85517125 - L2 LINE L2 -18 3254 2826 203 191 85 0 chr17 3988087 3988134 -85516419 + L2 LINE L2 3263 3313 0 1530 142 46 4 chr17 3988551 3988811 -85515742 - MER1B DNA MER1_type 0 339 69 206 217 0 0 chr17 3989360 3989406 -85515147 - L2 LINE L2 -5 3308 3263 234 0 0 0 chr17 3989420 3989446 -85515107 + (TTA)n Simple_repeat Simple_repeat 2 27 0 221 231 92 15 chr17 3989486 3989551 -85515002 + MIR SINE MIR 25 94 -114 299 200 0 57 chr17 3989557 3989627 -85514926 - 5S rRNA rRNA -53 68 3 872 222 17 26 chr17 3990461 3990691 -85513862 - MIR SINE MIR -27 235 8 1766 182 7 3 chr17 3991345 3991642 -85512911 + AluJb SINE Alu 1 298 -14 589 192 90 30 chr17 3991716 3991883 -85512670 + L1ME4a LINE L1 5944 6120 -1 211 281 0 0 chr17 3992318 3992375 -85512178 - MIR SINE MIR -33 229 173 2775 281 142 50 chr17 3992384 3993035 -85511518 + L2 LINE L2 602 1191 -2122 1760 145 57 3 chr17 3993035 3993318 -85511235 + AluSx SINE Alu 1 298 -14 2775 281 142 50 chr17 3993318 3995159 -85509394 + L2 LINE L2 1191 3309 -4 487 231 130 0 chr17 3996061 3996169 -85508384 + FLAM_C SINE Alu 2 123 -20 1591 164 6 68 chr17 3996320 3996481 -85508072 - AluJb SINE Alu -16 296 162 2327 107 0 0 chr17 3996481 3996780 -85507773 - AluSx SINE Alu -13 299 1 1591 164 6 68 chr17 3996780 3996929 -85507624 - AluJb SINE Alu -150 162 5 1233 63 25 0 chr17 3997627 3997786 -85506767 + L1PA5 LINE L1 5989 6151 -3 1828 147 33 16 chr17 3997874 3998181 -85506372 + AluJb SINE Alu 1 312 0 686 226 96 26 chr17 3998307 3998577 -85505976 - L1MC5 LINE L1 -54 7907 7619 1606 137 0 113 chr17 3998601 3998936 -85505617 + AluJo SINE Alu 1 297 -5 194 320 40 0 chr17 3999512 3999587 -85504966 - MIR SINE MIR -77 131 54 24 77 0 0 chr17 4000249 4000301 -85504252 + AT_rich Low_complexity Low_complexity 1 52 0 294 212 47 0 chr17 4000311 4000396 -85504157 + L1ME4a LINE L1 5831 5919 -202 241 231 0 0 chr17 4000429 4000468 -85504085 + AluJo SINE Alu 2 40 -263 581 131 0 47 chr17 4000471 4000578 -85503975 - AluJo/FRAM SINE Alu -2 310 209 1618 182 14 0 chr17 4000578 4000853 -85503700 + AluJo SINE Alu 27 305 -7 207 167 0 0 chr17 4000862 4000904 -85503649 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 2116 104 7 33 chr17 4001041 4001340 -85503213 - AluSq SINE Alu -22 291 1 315 316 43 0 chr17 4001454 4001571 -85502982 - L2 LINE L2 -8 3305 3184 2329 98 3 0 chr17 4002302 4002609 -85501944 + AluSx SINE Alu 1 308 -4 310 333 0 0 chr17 4003052 4003148 -85501405 - MIR SINE MIR -66 142 47 24 0 0 0 chr17 4003337 4003361 -85501192 + AT_rich Low_complexity Low_complexity 1 24 0 221 333 15 0 chr17 4003975 4004041 -85500512 - L2 LINE L2 -217 3055 2989 306 350 14 0 chr17 4004111 4004251 -85500302 - L2 LINE L2 -457 2857 2716 247 295 122 51 chr17 4005149 4005305 -85499248 - L2 LINE L2 -2 3270 3104 1705 161 0 29 chr17 4006182 4006492 -85498061 - AluJo SINE Alu -11 301 1 567 195 88 0 chr17 4007580 4007693 -85496860 - MER58A DNA MER1_type 0 160 38 2337 43 3 13 chr17 4008886 4009187 -85495366 - AluY SINE Alu -13 298 1 1894 137 0 29 chr17 4009208 4009523 -85495030 - AluSx SINE Alu -6 306 1 445 238 32 56 chr17 4009523 4009649 -85494904 + MER5B DNA MER1_type 5 127 -51 193 335 129 13 chr17 4012868 4013023 -85491530 - MIR SINE MIR -70 192 20 1004 182 9 40 chr17 4014284 4014509 -85490044 - AluJo SINE Alu -94 218 1 203 146 24 0 chr17 4014756 4014797 -85489756 + CT-rich Low_complexity Low_complexity 3 44 0 1134 101 24 0 chr17 4015713 4015881 -85488672 + AluSc SINE Alu 132 303 -6 237 273 114 45 chr17 4015881 4016013 -85488540 - MER112 DNA MER1_type -115 145 5 294 234 183 15 chr17 4016227 4016364 -85488189 + L3 LINE CR1 1346 1505 -72 1781 155 7 0 chr17 4016382 4016672 -85487881 - AluSx SINE Alu -19 293 2 581 265 155 0 chr17 4017099 4017299 -85487254 + MIR SINE MIR 6 236 -26 334 308 67 10 chr17 4017369 4017473 -85487080 + L2 LINE L2 3123 3232 -40 1602 181 0 37 chr17 4017706 4018027 -85486526 + AluSx SINE Alu 1 309 -3 1468 174 31 14 chr17 4018042 4018335 -85486218 - AluJo SINE Alu -14 298 1 678 215 117 27 chr17 4018408 4018631 -85485922 + L1MC5 LINE L1 7688 7930 -31 * 1809 254 53 30 chr17 4018629 4019166 -85485387 + L1PA14 LINE L1 405 928 -5226 1937 83 12 0 chr17 4019166 4019418 -85485135 - AluSc SINE Alu -54 255 1 541 156 37 18 chr17 4019427 4019536 -85485017 - L1MB7 LINE L1 0 6184 6074 1809 254 53 30 chr17 4019536 4019868 -85484685 + L1PA14 LINE L1 935 5780 -374 1579 107 0 0 chr17 4019908 4020124 -85484429 + AluSg SINE Alu 1 216 -94 2509 92 51 0 chr17 4020141 4020512 -85484041 + L1PA14 LINE L1 5769 6158 -3 2067 132 3 0 chr17 4020523 4020834 -85483719 + AluSx SINE Alu 1 312 0 2773 234 88 67 chr17 4020834 4021848 -85482705 + HAL1 LINE L1 1060 2107 -400 1870 155 3 3 chr17 4021848 4022151 -85482402 + AluJb SINE Alu 1 303 -9 2773 234 88 67 chr17 4022151 4022383 -85482170 + HAL1 LINE L1 2107 2333 -174 201 220 0 20 chr17 4022673 4022723 -85481830 - L2 LINE L2 -279 2993 2945 181 260 0 20 chr17 4022740 4022790 -85481763 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022807 4022857 -85481696 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022874 4022924 -85481629 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022941 4022991 -85481562 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4023008 4023058 -85481495 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4023075 4023125 -85481428 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 4023142 4023192 -85481361 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 4023208 4023258 -85481295 - L2 LINE L2 -279 2993 2945 410 0 20 0 chr17 4025083 4025133 -85479420 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 200 20 0 chr17 4025133 4025183 -85479370 + (CATA)n Simple_repeat Simple_repeat 2 52 0 220 289 141 74 chr17 4025686 4025732 -85478821 - MIR3 SINE MIR -62 146 104 2181 97 3 0 chr17 4025732 4026030 -85478523 + AluSg SINE Alu 3 301 -9 220 289 141 74 chr17 4026030 4026118 -85478435 - MIR3 SINE MIR -104 104 3 22 0 0 0 chr17 4026941 4026963 -85477590 + AT_rich Low_complexity Low_complexity 1 22 0 453 209 40 129 chr17 4027538 4027763 -85476790 - L1MC5 LINE L1 -46 7915 7711 1869 147 7 0 chr17 4027777 4028077 -85476476 - AluJb SINE Alu -10 302 1 832 286 96 49 chr17 4028396 4028935 -85475618 + L1M4 LINE L1 3658 4230 -1916 1202 121 0 0 chr17 4029106 4029280 -85475273 + AluSg/x SINE Alu 136 309 -3 2237 89 0 0 chr17 4029833 4030125 -85474428 + AluSq SINE Alu 1 292 -21 362 316 110 30 chr17 4030872 4031109 -85473444 + L3 LINE CR1 961 1216 -361 1764 170 3 3 chr17 4031647 4031953 -85472600 - AluJb SINE Alu -5 307 2 873 91 83 0 chr17 4032219 4032351 -85472202 + AluSp SINE Alu 1 143 -170 25 0 0 0 chr17 4032351 4032376 -85472177 + AT_rich Low_complexity Low_complexity 1 25 0 1307 76 17 0 chr17 4032379 4032585 -85471968 + AluSp SINE Alu 110 318 0 537 350 137 5 chr17 4032812 4033192 -85471361 - L3 LINE CR1 -344 1233 804 414 282 57 13 chr17 4033550 4033738 -85470815 - MIR SINE MIR -31 231 33 1985 105 0 48 chr17 4033864 4034177 -85470376 + AluSq SINE Alu 4 301 -12 285 304 64 59 chr17 4034981 4035185 -85469368 + L2 LINE L2 3086 3290 -23 1072 167 158 92 chr17 4035206 4035285 -85469268 - MER44D DNA MER2_type -1882 609 537 388 46 0 31 chr17 4035285 4035350 -85469203 + (TA)n Simple_repeat Simple_repeat 2 64 0 1072 167 158 92 chr17 4035350 4035399 -85469154 - MER44D DNA MER2_type -1954 537 493 2274 64 3 3 chr17 4035399 4035695 -85468858 + AluY SINE Alu 1 296 -15 1072 167 158 92 chr17 4035695 4035882 -85468671 - MER44D DNA MER2_type -1998 493 2 2201 84 0 19 chr17 4035933 4036241 -85468312 + AluSp SINE Alu 1 302 -11 1680 149 28 3 chr17 4036601 4036890 -85467663 + AluJb SINE Alu 1 296 -16 1903 124 14 7 chr17 4036985 4037275 -85467278 - AluSx SINE Alu -20 292 1 640 211 0 30 chr17 4037820 4037953 -85466600 - FLAM_C SINE Alu -9 134 6 958 137 0 0 chr17 4038065 4038211 -85466342 + MLT2A2 LTR ERVL 308 453 0 3715 122 14 21 chr17 4038211 4038244 -85466309 + HERVL-A2 LTR ERVL 1 33 -5621 2100 104 0 7 chr17 4038244 4038542 -85466011 - AluSg SINE Alu -14 296 1 3715 122 14 21 chr17 4038542 4039084 -85465469 + HERVL-A2 LTR ERVL 33 572 -5082 11022 107 13 0 chr17 4039086 4040563 -85463990 + HERVL LTR ERVL 2125 3620 -2034 231 260 39 77 chr17 4040577 4040681 -85463872 + MIR SINE MIR 113 212 -50 2334 78 0 7 chr17 4040945 4041253 -85463300 - AluSq SINE Alu -7 306 1 337 286 267 34 chr17 4041809 4042075 -85462478 + L2 LINE L2 2985 3312 -1 595 288 55 66 chr17 4042126 4042296 -85462257 + L1M4 LINE L1 4791 4961 -1185 1915 113 29 0 chr17 4042296 4042571 -85461982 - AluSq SINE Alu -22 291 9 595 288 55 66 chr17 4042571 4042855 -85461698 + L1M4 LINE L1 4961 5240 -906 1983 145 0 0 chr17 4042925 4043236 -85461317 - AluSx SINE Alu -1 311 1 215 235 0 86 chr17 4043252 4043290 -85461263 + MIR SINE MIR 186 215 -47 1813 124 10 29 chr17 4043290 4043596 -85460957 + AluJo SINE Alu 1 300 -12 215 235 0 86 chr17 4043596 4043638 -85460915 + MIR SINE MIR 215 259 -3 431 215 21 0 chr17 4043916 4044009 -85460544 - U13 snRNA snRNA -9 95 1 1544 174 27 14 chr17 4044631 4044925 -85459628 - AluJo SINE Alu -14 298 1 1739 124 84 0 chr17 4044936 4045209 -85459344 - AluSg SINE Alu -14 296 1 1985 141 0 0 chr17 4046175 4046474 -85458079 + AluSx SINE Alu 5 303 -9 261 0 0 0 chr17 4046525 4046554 -85457999 + (TA)n Simple_repeat Simple_repeat 1 29 0 1398 94 5 19 chr17 4046688 4046900 -85457653 + AluSq SINE Alu 94 302 -11 23 0 0 0 chr17 4046948 4046971 -85457582 + AT_rich Low_complexity Low_complexity 1 23 0 2125 112 0 22 chr17 4047551 4047865 -85456688 + AluY SINE Alu 1 307 -4 1500 62 5 0 chr17 4048031 4048223 -85456330 + AluSg/x SINE Alu 96 288 -22 2104 93 0 23 chr17 4048353 4048654 -85455899 + AluSc SINE Alu 5 298 -11 285 238 119 0 chr17 4048993 4049077 -85455476 - MIR SINE MIR -76 186 93 1486 164 0 57 chr17 4049493 4049839 -85454714 - AluJo SINE Alu 0 328 1 1693 141 40 13 chr17 4050004 4050303 -85454250 - AluSx SINE Alu -5 307 1 2032 101 6 19 chr17 4050362 4050679 -85453874 - AluSp SINE Alu 0 313 1 642 287 22 32 chr17 4051070 4051317 -85453236 + MIR SINE MIR 3 256 -6 756 251 0 6 chr17 4051572 4051755 -85452798 - MLT1E2-int LTR MaLR -1157 214 33 1685 231 70 35 chr17 4051796 4052233 -85452320 - MLT1E2 LTR MaLR 0 626 151 776 188 34 40 chr17 4052323 4052499 -85452054 - MLT1E2 LTR MaLR -330 175 1 2298 62 0 3 chr17 4053697 4053988 -85450565 - AluY SINE Alu -17 294 5 272 284 124 47 chr17 4054985 4055154 -85449399 + MIR SINE MIR 3 184 -78 2480 84 3 0 chr17 4055608 4055919 -85448634 - AluSp SINE Alu -1 312 1 192 77 0 0 chr17 4056451 4056477 -85448076 + (TA)n Simple_repeat Simple_repeat 2 27 0 2674 40 3 0 chr17 4056733 4057036 -85447517 - AluY SINE Alu -7 304 1 2138 112 7 0 chr17 4057038 4057332 -85447221 - AluSx SINE Alu -16 296 1 216 0 0 0 chr17 4057949 4057973 -85446580 + (A)n Simple_repeat Simple_repeat 1 24 0 1920 164 0 6 chr17 4058120 4058432 -85446121 + AluJb SINE Alu 1 310 -2 2018 133 7 13 chr17 4059089 4059389 -85445164 + AluJb SINE Alu 1 298 -14 1806 163 10 13 chr17 4059961 4060262 -85444291 + AluJb SINE Alu 1 300 -12 1602 153 24 0 chr17 4060287 4060542 -85444011 - AluJo SINE Alu -24 288 28 2092 138 3 13 chr17 4060781 4061093 -85443460 + AluSx SINE Alu 1 309 -3 2273 107 3 0 chr17 4061306 4061605 -85442948 - AluSp SINE Alu -13 300 1 1811 173 3 7 chr17 4062302 4062603 -85441950 - AluJb SINE Alu 0 312 13 240 289 304 0 chr17 4062628 4062898 -85441655 - L3 LINE CR1 -14 1563 1212 432 0 0 0 chr17 4063260 4063308 -85441245 + (TG)n Simple_repeat Simple_repeat 2 49 0 450 225 47 41 chr17 4064705 4064874 -85439679 - Charlie1 DNA MER1_type 0 2761 2592 189 0 0 0 chr17 4064971 4064992 -85439561 + (A)n Simple_repeat Simple_repeat 1 21 0 1959 131 16 16 chr17 4065042 4065347 -85439206 + AluSq SINE Alu 1 305 -8 249 91 0 0 chr17 4065364 4065397 -85439156 + Alu SINE Alu 1 33 -268 2053 108 9 41 chr17 4065399 4065715 -85438838 + AluSx SINE Alu 7 312 0 2417 78 10 3 chr17 4065724 4066031 -85438522 + AluSq SINE Alu 1 309 -4 1012 164 0 0 chr17 4066039 4066198 -85438355 + FRAM SINE Alu 9 167 -9 244 279 48 30 chr17 4066253 4066418 -85438135 - L1P LINE L1 -3452 2694 2527 332 284 89 64 chr17 4066418 4066587 -85437966 - L1M4 LINE L1 -3623 2523 2345 681 62 42 0 chr17 4066587 4066683 -85437870 - HY3 scRNA scRNA -1 100 1 332 284 89 64 chr17 4066683 4066749 -85437804 - L1M4 LINE L1 -3801 2345 2282 2214 112 7 3 chr17 4068293 4068596 -85435957 - AluSx SINE Alu -8 304 1 467 232 106 53 chr17 4068924 4068990 -85435563 + MER20 DNA MER1_type 2 63 -156 2157 132 0 0 chr17 4068990 4069286 -85435267 - AluSx SINE Alu -10 302 7 467 232 106 53 chr17 4069286 4069426 -85435127 + MER20 DNA MER1_type 63 219 0 1275 131 0 0 chr17 4070558 4070734 -85433819 - AluSp SINE Alu -4 309 134 294 249 69 83 chr17 4071334 4071484 -85433069 + L2 LINE L2 1564 1712 -1602 2286 117 0 0 chr17 4071484 4071792 -85432761 + AluSx SINE Alu 2 309 -3 294 249 69 83 chr17 4071792 4071858 -85432695 + L2 LINE L2 1712 1777 -1537 222 254 16 16 chr17 4071953 4072016 -85432537 - L2 LINE L2 -536 2778 2716 968 141 22 5 chr17 4072254 4072438 -85432115 + L1PB2 LINE L1 5959 6145 -6 217 98 20 39 chr17 4072719 4072770 -85431783 + (GGA)n Simple_repeat Simple_repeat 2 51 0 687 237 63 10 chr17 4072807 4073014 -85431539 + HAL1 LINE L1 2184 2401 -106 572 84 36 0 chr17 4073029 4073112 -85431441 - HY3 scRNA scRNA -2 99 14 26 50 0 0 chr17 4073681 4073721 -85430832 + AT_rich Low_complexity Low_complexity 1 40 0 675 200 0 0 chr17 4073821 4073946 -85430607 + AluJo/FLAM SINE Alu 3 127 -175 2365 88 3 0 chr17 4073948 4074243 -85430310 + AluSg SINE Alu 1 296 -14 2208 110 3 0 chr17 4076332 4076623 -85427930 - AluSq SINE Alu -17 296 5 2352 65 33 26 chr17 4078662 4078969 -85425584 - AluY SINE Alu -2 309 1 2059 137 0 29 chr17 4078990 4079305 -85425248 - AluSx SINE Alu -6 306 1 415 238 32 56 chr17 4079305 4079431 -85425122 + MER5B DNA MER1_type 5 127 -51 2043 168 0 0 chr17 4084090 4084400 -85420153 - AluJb SINE Alu -2 310 1 1585 206 3 19 chr17 4084423 4084733 -85419820 + AluJo SINE Alu 1 305 -7 225 360 26 20 chr17 4085133 4085286 -85419267 - L1MC/D LINE L1 -2164 5644 5491 2525 48 10 0 chr17 4086295 4086590 -85417963 + AluY SINE Alu 1 298 -13 181 274 0 65 chr17 4087443 4087505 -85417048 - MIR SINE MIR -81 181 124 246 276 104 22 chr17 4087855 4087989 -85416564 + MIR SINE MIR 47 191 -71 1771 70 86 150 chr17 4090637 4090964 -85413589 + AluSx SINE Alu 1 306 -6 2071 132 7 3 chr17 4090984 4091280 -85413273 - AluSx SINE Alu -15 297 1 1174 92 92 24 chr17 4095748 4095955 -85408598 - L1PB1 LINE L1 -2 6149 5929 308 321 30 15 chr17 4096540 4096674 -85407879 + MIR SINE MIR 48 183 -79 1507 125 133 26 chr17 4097060 4097324 -85407229 - AluSx SINE Alu -1 311 20 332 308 100 8 chr17 4098148 4098268 -85406285 + L2 LINE L2 3181 3311 -2 2018 128 7 3 chr17 4098567 4098856 -85405697 + AluJb SINE Alu 7 296 -16 259 325 50 17 chr17 4099820 4099940 -85404613 - L2 LINE L2 -217 3055 2932 2094 103 6 91 chr17 4100147 4100487 -85404066 + AluSx SINE Alu 1 311 -1 532 203 23 53 chr17 4103986 4104119 -85400434 - FLAM_A SINE Alu -2 131 3 206 343 40 80 chr17 4104288 4104463 -85400090 + MER5A DNA MER1_type 21 188 -1 212 242 158 32 chr17 4105038 4105133 -85399420 + L2 LINE L2 3204 3310 -3 687 193 0 17 chr17 4105169 4105288 -85399265 - FLAM_A SINE Alu -16 117 1 935 305 90 23 chr17 4105703 4106246 -85398307 + L2 LINE L2 2493 3068 -245 2232 128 0 0 chr17 4106374 4106678 -85397875 + AluSx SINE Alu 2 305 -7 2129 133 0 3 chr17 4107426 4107719 -85396834 - AluSx SINE Alu -11 301 10 2283 118 3 10 chr17 4107734 4108048 -85396505 - AluSx SINE Alu 0 312 1 2019 104 0 4 chr17 4108580 4108848 -85395705 - AluSx SINE Alu -45 267 1 1841 239 47 48 chr17 4109531 4109612 -85394941 + L1M4c LINE L1 2070 2150 -4232 2190 114 0 17 chr17 4109612 4109921 -85394632 + AluSx SINE Alu 1 304 0 1841 239 47 48 chr17 4109921 4109952 -85394601 + L1M4c LINE L1 2150 2180 -4202 1887 158 0 16 chr17 4109952 4110255 -85394298 + AluJo SINE Alu 1 298 -14 1841 239 47 48 chr17 4110255 4110525 -85394028 + L1M4c LINE L1 2180 2449 -3933 2583 60 0 0 chr17 4110525 4110825 -85393728 + AluY SINE Alu 1 300 -11 1841 239 47 48 chr17 4110825 4111184 -85393369 + L1M4c LINE L1 2449 2799 -3583 1525 35 29 0 chr17 4111184 4111358 -85393195 + SVA Other Other 1208 1386 0 1841 239 47 48 chr17 4111358 4111406 -85393147 + L1M4c LINE L1 2799 2846 -3536 461 213 21 0 chr17 4111407 4111501 -85393052 - AluJo SINE Alu -178 134 39 761 188 19 0 chr17 4111510 4111670 -85392883 + L1M4c LINE L1 2836 2998 -3384 728 208 39 0 chr17 4111678 4111808 -85392745 - AluJo SINE Alu -176 136 2 4289 209 37 40 chr17 4111809 4112621 -85391932 + L1M4c LINE L1 2987 3799 -2583 2064 112 0 4 chr17 4112621 4112899 -85391654 + AluSx SINE Alu 27 303 -9 4289 209 37 40 chr17 4112899 4113132 -85391421 + L1M4c LINE L1 3799 4031 -2351 2196 112 14 7 chr17 4113132 4113428 -85391125 - AluSx SINE Alu -14 298 1 4289 209 37 40 chr17 4113428 4113692 -85390861 + L1M4c LINE L1 4031 4294 -2088 761 186 54 143 chr17 4113793 4113968 -85390585 - MLT1F LTR MaLR -224 318 188 1975 162 0 0 chr17 4113968 4114258 -85390295 - AluJo SINE Alu -22 290 1 761 186 54 143 chr17 4114258 4114431 -85390122 - MLT1F LTR MaLR -354 188 1 603 264 16 36 chr17 4114441 4114634 -85389919 + L2 LINE L2 3114 3302 -11 213 39 0 0 chr17 4114669 4114695 -85389858 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1557 170 4 43 chr17 4114767 4115044 -85389509 - AluJb SINE Alu -45 267 2 275 62 0 42 chr17 4115045 4115093 -85389460 + MER65A LTR ERV1 400 445 0 2143 117 0 52 chr17 4115146 4115470 -85389083 + AluSx SINE Alu 1 307 -5 422 131 31 46 chr17 4115470 4115600 -85388953 + GA-rich Low_complexity Low_complexity 1 128 0 390 267 89 5 chr17 4115791 4116007 -85388546 + L1M4 LINE L1 5191 5424 -740 251 175 0 32 chr17 4116023 4116086 -85388467 + GA-rich Low_complexity Low_complexity 3 63 0 2272 104 0 13 chr17 4116128 4116436 -85388117 + AluSx SINE Alu 1 304 -8 2218 96 27 7 chr17 4116713 4117014 -85387539 - AluSx SINE Alu -5 307 1 391 332 156 17 chr17 4117187 4117425 -85387128 + L2 LINE L2 2079 2349 -965 814 190 70 25 chr17 4117426 4117584 -85386969 + FRAM SINE Alu 1 161 -15 516 328 72 39 chr17 4117626 4117695 -85386858 + L2 LINE L2 2376 2441 -873 1851 141 56 0 chr17 4117695 4117979 -85386574 - AluSx SINE Alu -12 300 1 516 328 72 39 chr17 4117979 4117998 -85386555 + L2 LINE L2 2441 2458 -856 2198 113 7 0 chr17 4117998 4118299 -85386254 - AluSx SINE Alu -9 303 1 516 328 72 39 chr17 4118299 4118661 -85385892 + L2 LINE L2 2458 2847 -467 2452 86 3 0 chr17 4118661 4118962 -85385591 - AluSp SINE Alu -11 302 1 516 328 72 39 chr17 4118962 4118994 -85385559 + L2 LINE L2 2847 2876 -438 263 421 64 0 chr17 4119101 4119241 -85385312 + L2 LINE L2 3123 3271 -1 1039 174 0 0 chr17 4119249 4119410 -85385143 - AluSg/x SINE Alu -16 294 134 1743 154 79 101 chr17 4119410 4119844 -85384709 + L1MB7 LINE L1 5674 6116 -68 2514 74 0 0 chr17 4119844 4120141 -85384412 + AluY SINE Alu 1 297 -14 1741 164 14 3 chr17 4120151 4120444 -85384109 + AluSx SINE Alu 13 308 -4 1778 171 31 0 chr17 4120444 4120731 -85383822 + AluJb SINE Alu 1 296 -16 1743 154 79 101 chr17 4120731 4120789 -85383764 + L1MB7 LINE L1 6123 6167 -17 352 221 12 35 chr17 4121095 4121181 -85383372 + MIR SINE MIR 41 124 -84 2463 69 0 0 chr17 4121448 4121739 -85382814 + AluY SINE Alu 1 291 -20 370 100 29 43 chr17 4122023 4122093 -85382460 + L1MB7 LINE L1 5808 5876 -308 2408 80 3 3 chr17 4123038 4123338 -85381215 - AluSq SINE Alu -13 300 1 191 386 29 0 chr17 4125034 4125104 -85379449 - MIR SINE MIR -96 112 41 1227 91 5 32 chr17 4125114 4125301 -85379252 - L1PA11 LINE L1 0 6174 5993 2402 91 0 0 chr17 4125630 4125928 -85378625 + AluSx SINE Alu 1 298 -14 439 356 75 61 chr17 4126230 4126590 -85377963 - L2 LINE L2 -2 3270 2906 1122 254 135 21 chr17 4126617 4127047 -85377506 - MLT1J LTR MaLR -27 484 6 2379 70 13 7 chr17 4129212 4129510 -85375043 - AluY SINE Alu -11 300 1 197 327 0 0 chr17 4129664 4129719 -85374834 + L2 LINE L2 2716 2770 -544 323 331 18 10 chr17 4130250 4130379 -85374174 + MIR SINE MIR 18 141 -67 362 132 0 15 chr17 4130640 4130708 -85373845 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 292 129 0 48 chr17 4130708 4130770 -85373783 + (GGAGAA)n Simple_repeat Simple_repeat 3 61 0 2293 109 0 0 chr17 4131127 4131421 -85373132 + AluSg SINE Alu 1 294 -16 300 270 81 0 chr17 4131507 4131655 -85372898 + L1ME4a LINE L1 5962 6121 0 360 297 12 36 chr17 4132054 4132219 -85372334 + MLT1K LTR MaLR 126 286 -302 494 215 25 0 chr17 4132290 4132411 -85372142 + MLT1K LTR MaLR 462 585 -3 992 193 6 0 chr17 4132897 4133063 -85371490 + FAM SINE Alu 1 167 -8 1000 184 54 97 chr17 4133127 4133317 -85371236 - L1M4 LINE L1 -914 5232 5036 2064 140 0 31 chr17 4133317 4133639 -85370914 - AluSx SINE Alu 0 312 1 1000 184 54 97 chr17 4133639 4133732 -85370821 - L1M4 LINE L1 -1110 5036 4962 2328 118 0 3 chr17 4133732 4134036 -85370517 - AluSx SINE Alu -9 303 1 1000 184 54 97 chr17 4134036 4134082 -85370471 - L1M4 LINE L1 -1184 4962 4916 427 307 101 46 chr17 4134592 4134810 -85369743 + MIR SINE MIR 2 231 -31 229 181 0 113 chr17 4136269 4136446 -85368107 + G-rich Low_complexity Low_complexity 2 158 0 2160 95 0 3 chr17 4136804 4137133 -85367420 + AluSx SINE Alu 1 328 0 1026 108 43 0 chr17 4137814 4137992 -85366561 - AluSp SINE Alu 0 324 141 1684 228 49 48 chr17 4138101 4138627 -85365926 - L1MC4 LINE L1 -276 7766 7240 819 241 66 0 chr17 4138634 4138846 -85365707 - L1MC4 LINE L1 -990 7052 6827 310 155 13 25 chr17 4138866 4138945 -85365608 - AluS SINE Alu -238 65 1 265 265 0 13 chr17 4138945 4139029 -85365524 - L1MC4 LINE L1 -1474 6530 6439 270 268 14 14 chr17 4139900 4139971 -85364582 + L2 LINE L2 3198 3268 -4 2242 103 7 0 chr17 4140449 4140739 -85363814 + AluSg SINE Alu 1 292 -18 281 311 92 0 chr17 4142530 4142649 -85361904 - MER117 DNA MER1_type -22 175 46 1804 177 0 13 chr17 4142756 4143055 -85361498 - AluJb SINE Alu -17 295 1 1758 180 9 25 chr17 4143114 4143431 -85361122 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 4143770 4143804 -85360749 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr17 4143892 4143913 -85360640 + AT_rich Low_complexity Low_complexity 1 21 0 2157 117 3 13 chr17 4144761 4145070 -85359483 + AluSx SINE Alu 1 306 -6 2003 93 0 0 chr17 4145826 4146083 -85358470 - AluY SINE Alu 0 311 55 2463 93 0 0 chr17 4146845 4147147 -85357406 + AluSq SINE Alu 1 302 -11 1790 169 23 13 chr17 4147169 4147477 -85357076 + AluJo SINE Alu 1 311 -1 1030 212 73 38 chr17 4148156 4148232 -85356321 - LTR37A LTR ERV1 0 426 354 1548 174 22 73 chr17 4148232 4148251 -85356302 - AluJb SINE Alu -11 301 283 201 74 0 0 chr17 4148251 4148278 -85356275 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1548 174 22 73 chr17 4148278 4148428 -85356125 - AluJb SINE Alu -29 283 153 2210 102 3 16 chr17 4148428 4148731 -85355822 - AluSx SINE Alu -9 303 5 1548 174 22 73 chr17 4148731 4148877 -85355676 - AluJb SINE Alu -159 153 1 1030 212 73 38 chr17 4148877 4149168 -85355385 - LTR37A LTR ERV1 -72 354 46 222 37 0 0 chr17 4149186 4149213 -85355340 + (T)n Simple_repeat Simple_repeat 1 27 0 2445 70 30 0 chr17 4149409 4149711 -85354842 - AluY SINE Alu 0 311 1 1136 138 10 20 chr17 4150126 4150329 -85354224 - L1MA2 LINE L1 0 6304 6104 223 352 33 0 chr17 4150416 4150507 -85354046 - L2 LINE L2 -6 3266 3173 1073 318 92 53 chr17 4151186 4152242 -85352311 - L2 LINE L2 0 3272 2163 1802 163 7 29 chr17 4152242 4152549 -85352004 + AluJb SINE Alu 1 300 -12 1073 318 92 53 chr17 4152549 4152813 -85351740 - L2 LINE L2 -1109 2163 1911 485 260 180 0 chr17 4152985 4153135 -85351418 - MER5A DNA MER1_type 0 189 13 251 330 53 0 chr17 4153178 4153272 -85351281 - L3 LINE CR1 -67 1510 1412 471 289 162 29 chr17 4153400 4153708 -85350845 - L3 LINE CR1 -555 1022 674 2163 107 0 32 chr17 4154083 4154391 -85350162 + AluSx SINE Alu 2 299 -13 2444 91 3 0 chr17 4154722 4155030 -85349523 - AluSp SINE Alu -4 309 1 2060 136 20 3 chr17 4155030 4155324 -85349229 - AluSx SINE Alu -12 300 2 186 311 107 80 chr17 4156212 4156437 -85348116 - L2 LINE L2 -97 3175 2945 1153 60 0 0 chr17 4156555 4156689 -85347864 - AluSq/x SINE Alu -178 134 1 216 271 19 84 chr17 4156722 4156829 -85347724 - MIR3 SINE MIR -1 207 108 2490 78 3 0 chr17 4157515 4157821 -85346732 + AluSp SINE Alu 1 307 -6 280 93 19 19 chr17 4157831 4157885 -85346668 + L1MB7 LINE L1 6130 6183 -1 1801 102 0 38 chr17 4157895 4158159 -85346394 + AluSx SINE Alu 58 311 -1 312 207 35 0 chr17 4158212 4158270 -85346283 + AluS SINE Alu 2 61 -241 2332 90 3 3 chr17 4158535 4158835 -85345718 - AluSx SINE Alu -12 300 1 2072 122 0 0 chr17 4158853 4159160 -85345393 - AluSx SINE Alu 0 309 3 625 256 84 0 chr17 4159540 4159731 -85344822 - MIR SINE MIR 0 262 56 2313 92 20 3 chr17 4159740 4160044 -85344509 - AluY SINE Alu -2 309 1 670 177 15 23 chr17 4160044 4160174 -85344379 - FLAM_A SINE Alu -4 129 1 219 158 0 0 chr17 4160175 4160213 -85344340 - MIR SINE MIR -71 191 154 283 85 0 0 chr17 4160321 4160368 -85344185 + Alu SINE Alu 262 308 0 2197 65 41 31 chr17 4160409 4160703 -85343850 - AluY SINE Alu -6 305 9 884 195 227 35 chr17 4161311 4161567 -85342986 + AluSx SINE Alu 1 305 -7 1405 181 89 14 chr17 4161571 4161678 -85342875 + AluJb SINE Alu 1 99 -213 2235 117 0 0 chr17 4161678 4161976 -85342577 + AluSq SINE Alu 3 300 -13 1405 181 89 14 chr17 4161976 4162150 -85342403 + AluJb SINE Alu 99 303 -9 1703 163 46 0 chr17 4163115 4163397 -85341156 - AluJo SINE Alu -17 295 1 355 273 40 66 chr17 4163475 4163673 -85340880 - HAL1b LINE L1 -916 432 240 260 278 204 6 chr17 4164217 4164379 -85340174 - MLT1K LTR MaLR -17 571 378 335 167 0 39 chr17 4164715 4164793 -85339760 + L1ME4a LINE L1 6046 6120 -1 2216 100 10 3 chr17 4164840 4165139 -85339414 + AluSx SINE Alu 1 301 -11 2321 62 10 10 chr17 4167100 4167388 -85337165 + AluSg SINE Alu 1 288 -22 336 227 106 63 chr17 4167460 4167520 -85337033 + L1MC/D LINE L1 5198 5254 -984 1901 158 7 3 chr17 4167520 4167817 -85336736 - AluJb SINE Alu -14 298 1 336 227 106 63 chr17 4167817 4168007 -85336546 + L1MC/D LINE L1 5254 5472 -766 1527 153 3 130 chr17 4168298 4168433 -85336120 + AluJb SINE Alu 1 151 -161 512 103 11 0 chr17 4168433 4168520 -85336033 + L1PB1 LINE L1 6063 6150 -1 1527 153 3 130 chr17 4168520 4168731 -85335822 + AluJb SINE Alu 151 303 -9 239 148 37 19 chr17 4168768 4168822 -85335731 + (CATA)n Simple_repeat Simple_repeat 2 56 0 719 224 46 0 chr17 4169145 4169319 -85335234 + MER5A DNA MER1_type 2 183 -6 189 107 0 0 chr17 4169546 4169574 -85334979 + (A)n Simple_repeat Simple_repeat 1 28 0 2265 97 0 10 chr17 4169659 4169958 -85334595 - AluSq SINE Alu -17 296 1 1642 212 13 0 chr17 4171043 4171345 -85333208 - AluJb SINE Alu -6 306 1 2081 135 7 0 chr17 4171453 4171750 -85332803 - AluSx SINE Alu -13 299 1 399 230 0 11 chr17 4172255 4172342 -85332211 - MIR SINE MIR -175 87 2 2627 208 73 66 chr17 4172371 4172492 -85332061 - L1ME1 LINE L1 -8 6092 5973 2291 120 3 3 chr17 4172492 4172801 -85331752 + AluSx SINE Alu 2 310 -2 2627 208 73 66 chr17 4172801 4173577 -85330976 - L1ME1 LINE L1 -127 5973 5188 1910 239 131 23 chr17 4173586 4174446 -85330107 - L1ME1 LINE L1 -2045 4035 3083 1294 98 0 6 chr17 4174446 4174619 -85329934 - AluSg/x SINE Alu -11 299 128 345 220 184 48 chr17 4174619 4174787 -85329766 - L1ME1 LINE L1 -2993 3087 2897 862 175 6 38 chr17 4174789 4174949 -85329604 - AluJo SINE Alu -138 174 20 497 218 77 12 chr17 4174970 4175140 -85329413 - L1ME1 LINE L1 -3570 2510 2330 1678 174 14 7 chr17 4175147 4175435 -85329118 + AluJb SINE Alu 2 291 -21 369 243 26 53 chr17 4175490 4175642 -85328911 - L1ME1 LINE L1 -5882 188 41 2123 123 0 3 chr17 4175841 4176134 -85328419 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 4176141 4176162 -85328391 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 4176243 4176266 -85328287 + AT_rich Low_complexity Low_complexity 1 23 0 1847 58 9 0 chr17 4176767 4176991 -85327562 + AluY SINE Alu 82 307 -4 650 234 96 59 chr17 4178013 4178316 -85326237 - L1MC5 LINE L1 -47 7914 7601 1662 229 112 74 chr17 4178353 4179255 -85325298 - L1MC5 LINE L1 -471 7490 6542 204 382 88 23 chr17 4180249 4180572 -85323981 + L2 LINE L2 1700 2071 -1243 2323 39 0 0 chr17 4180572 4180832 -85323721 - AluY SINE Alu -11 300 41 204 382 88 23 chr17 4180832 4181032 -85323521 + L2 LINE L2 2071 2257 -1057 2016 94 56 3 chr17 4181032 4181320 -85323233 - AluSq SINE Alu -8 305 3 1995 188 105 20 chr17 4181519 4182015 -85322538 - L1MB7 LINE L1 -56 6128 5591 1386 167 0 70 chr17 4182049 4182336 -85322217 - AluJo SINE Alu -23 289 23 2028 87 38 11 chr17 4182643 4182930 -85321623 - AluSg1 SINE Alu -10 299 5 498 33 0 0 chr17 4183006 4183066 -85321487 + (TA)n Simple_repeat Simple_repeat 2 61 0 1364 198 32 12 chr17 4183068 4183321 -85321232 - AluJo SINE Alu -31 281 24 294 179 32 0 chr17 4183322 4183417 -85321136 + (TA)n Simple_repeat Simple_repeat 2 99 0 2102 129 3 3 chr17 4183418 4183721 -85320832 - AluSg SINE Alu -7 303 1 231 306 24 0 chr17 4183762 4183847 -85320706 - L1ME4a LINE L1 -67 6054 5968 204 135 0 0 chr17 4183849 4183886 -85320667 + (TG)n Simple_repeat Simple_repeat 1 37 0 333 182 0 80 chr17 4184066 4184087 -85320466 - L1ME4a LINE L1 -327 5794 5773 2342 86 7 13 chr17 4184087 4184390 -85320163 + AluSx SINE Alu 1 301 -11 333 182 0 80 chr17 4184390 4184456 -85320097 - L1ME4a LINE L1 -348 5773 5714 230 315 177 35 chr17 4186622 4187159 -85317394 + L2 LINE L2 2248 2860 -454 2137 104 3 7 chr17 4187912 4188211 -85316342 + AluY SINE Alu 1 298 -13 985 185 45 15 chr17 4188278 4188478 -85316075 + MER3 DNA MER1_type 1 206 -3 376 250 121 0 chr17 4188824 4188948 -85315605 - MIR SINE MIR -112 150 12 2197 103 20 3 chr17 4188950 4189252 -85315301 - AluSx SINE Alu -5 307 1 425 186 23 12 chr17 4189455 4189541 -85315012 - L2 LINE L2 -43 3270 3184 * 508 304 62 41 chr17 4189533 4189930 -85314623 - L2 LINE L2 -258 3055 2653 1957 160 3 7 chr17 4190005 4190312 -85314241 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 4190617 4190638 -85313915 + AT_rich Low_complexity Low_complexity 1 21 0 1885 136 39 0 chr17 4190877 4191157 -85313396 + AluSx SINE Alu 1 291 -21 683 171 0 8 chr17 4191715 4191832 -85312721 + AluJo/FLAM SINE Alu 2 117 -195 539 158 158 36 chr17 4191827 4191966 -85312587 - AluSg/x SINE Alu -16 294 139 * 1717 154 0 0 chr17 4191973 4192232 -85312321 - AluSx SINE Alu -53 259 1 1104 123 0 0 chr17 4192266 4192421 -85312132 + AluJb SINE Alu 132 286 -26 219 88 0 0 chr17 4193134 4193168 -85311385 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 2517 74 0 0 chr17 4194594 4194893 -85309660 + AluSx SINE Alu 1 299 -13 229 299 19 37 chr17 4194984 4195091 -85309462 - L2 LINE L2 -2673 641 537 793 172 31 0 chr17 4195107 4195235 -85309318 - FLAM_C SINE Alu -1 132 1 843 185 5 43 chr17 4195373 4195557 -85308996 + FRAM SINE Alu 1 172 -4 230 176 59 0 chr17 4196107 4196158 -85308395 + L2 LINE L2 3209 3262 -10 337 234 47 55 chr17 4196180 4196308 -85308245 + MIR3 SINE MIR 33 159 -49 2469 63 3 22 chr17 4196582 4196898 -85307655 - AluSg SINE Alu 0 310 1 191 257 124 9 chr17 4197359 4197464 -85307089 + MIR SINE MIR 16 132 -130 1212 108 11 17 chr17 4200069 4200245 -85304308 + FRAM SINE Alu 1 171 -5 859 201 39 44 chr17 4202316 4202520 -85302033 - MER3 DNA MER1_type -5 204 2 251 167 83 69 chr17 4202857 4202929 -85301624 - MIR SINE MIR -31 231 159 1641 176 27 10 chr17 4203016 4203311 -85301242 - AluJo SINE Alu -10 302 3 1703 58 24 0 chr17 4203663 4203871 -85300682 - AluY SINE Alu -19 292 80 2608 50 0 0 chr17 4203871 4204167 -85300386 - AluY SINE Alu -14 297 1 1223 183 114 19 chr17 4204441 4204704 -85299849 + AluJo SINE Alu 1 288 -24 376 88 0 18 chr17 4204728 4204785 -85299768 + Alu SINE Alu 238 293 -8 1420 124 139 23 chr17 4205870 4206129 -85298424 - AluSg SINE Alu -21 289 1 445 288 158 28 chr17 4206379 4206604 -85297949 - LTR16A LTR ERVL 0 457 201 795 196 266 32 chr17 4206749 4207061 -85297492 + MLT1F1 LTR MaLR 183 567 0 1799 128 60 0 chr17 4207588 4207870 -85296683 - AluSx SINE Alu -13 299 1 1360 128 50 5 chr17 4208004 4208222 -85296331 + MER30 DNA MER1_type 1 228 -2 2209 113 3 3 chr17 4208663 4208963 -85295590 + AluSq SINE Alu 1 300 -13 277 235 78 72 chr17 4209037 4209190 -85295363 + L1 LINE L1 4882 5035 -1111 874 168 7 7 chr17 4209299 4209454 -85295099 + AluSg/x SINE Alu 135 289 -21 369 0 0 0 chr17 4209456 4209497 -85295056 + (TA)n Simple_repeat Simple_repeat 2 42 0 2003 141 3 7 chr17 4209674 4209971 -85294582 - AluSx SINE Alu -14 298 3 1818 161 43 7 chr17 4209973 4210272 -85294281 - AluSx SINE Alu -2 310 1 2236 86 21 3 chr17 4210279 4210569 -85293984 - AluSq SINE Alu -18 295 1 400 251 104 32 chr17 4210575 4210960 -85293593 + L1ME3A LINE L1 5521 5940 -230 522 69 14 0 chr17 4211409 4211481 -85293072 - U3 snRNA snRNA -144 73 1 2235 128 0 0 chr17 4211707 4212019 -85292534 - AluSx SINE Alu 0 312 1 1816 134 40 0 chr17 4212867 4213143 -85291410 + AluSg SINE Alu 1 287 -23 254 319 11 0 chr17 4213330 4213421 -85291132 + GA-rich Low_complexity Low_complexity 4 95 0 2144 114 0 20 chr17 4213505 4213811 -85290742 + AluSx SINE Alu 1 300 -12 26 30 0 0 chr17 4213892 4213925 -85290628 + AT_rich Low_complexity Low_complexity 1 33 0 2251 128 0 7 chr17 4213953 4214257 -85290296 + AluSx SINE Alu 1 302 -10 2289 121 0 6 chr17 4214605 4214918 -85289635 + AluSx SINE Alu 1 311 -1 1833 171 13 10 chr17 4215092 4215432 -85289121 - AluJo SINE Alu 0 341 1 388 289 139 66 chr17 4215518 4215958 -85288595 + HAL1 LINE L1 1394 1875 -632 2305 98 0 3 chr17 4215958 4216254 -85288299 + AluSc SINE Alu 1 295 -14 388 289 139 66 chr17 4216254 4216301 -85288252 + HAL1 LINE L1 1875 1917 -590 2345 107 0 0 chr17 4216413 4216713 -85287840 + AluSx SINE Alu 3 302 -10 1253 134 0 21 chr17 4217048 4217235 -85287318 + AluSx SINE Alu 1 183 -129 260 266 46 29 chr17 4217254 4217427 -85287126 + C-rich Low_complexity Low_complexity 3 178 0 180 228 0 0 chr17 4217465 4217522 -85287031 + C-rich Low_complexity Low_complexity 1 57 0 194 224 0 26 chr17 4217586 4217662 -85286891 + C-rich Low_complexity Low_complexity 3 76 0 397 306 0 0 chr17 4217962 4218086 -85286467 + G-rich Low_complexity Low_complexity 1 124 0 384 249 0 0 chr17 4218098 4218263 -85286290 + G-rich Low_complexity Low_complexity 1 165 0 351 167 0 0 chr17 4218297 4218387 -85286166 + G-rich Low_complexity Low_complexity 1 90 0 1458 98 0 0 chr17 4218427 4218611 -85285942 + AluSg/x SINE Alu 116 299 -13 22 0 0 0 chr17 4218709 4218731 -85285822 + AT_rich Low_complexity Low_complexity 1 22 0 1118 208 64 13 chr17 4218916 4219152 -85285401 - MLT1F1 LTR MaLR -307 260 13 615 248 30 0 chr17 4219192 4219325 -85285228 - MER119 DNA MER1_type -391 192 56 421 167 175 0 chr17 4219811 4219925 -85284628 - L1MA9 LINE L1 -10 6302 6169 1437 204 87 63 chr17 4219967 4220384 -85284169 - L1MC4a LINE L1 0 7808 7377 1748 175 24 0 chr17 4220384 4220675 -85283878 + AluJo SINE Alu 1 298 -14 1437 204 87 63 chr17 4220675 4220718 -85283835 - L1MC4a LINE L1 -431 7377 7337 1810 174 26 10 chr17 4220830 4221134 -85283419 + AluJb SINE Alu 1 309 -3 220 295 77 0 chr17 4221186 4221264 -85283289 + L2 LINE L2 3191 3274 -39 199 396 20 41 chr17 4222791 4222988 -85281565 + L2 LINE L2 2992 3184 -88 1686 141 46 89 chr17 4223093 4223440 -85281113 + MER7A DNA MER2_type 1 330 -16 1615 167 33 46 chr17 4223673 4223979 -85280574 - AluJo SINE Alu -10 302 1 478 239 23 6 chr17 4223986 4224114 -85280439 - L1MA9 LINE L1 0 6291 6167 2329 108 7 0 chr17 4224231 4224536 -85280017 + AluSx SINE Alu 1 307 -5 2134 122 7 0 chr17 4226028 4226323 -85278230 + AluSg SINE Alu 1 297 -13 26 30 0 0 chr17 4226657 4226690 -85277863 + AT_rich Low_complexity Low_complexity 1 33 0 627 104 144 80 chr17 4227215 4227340 -85277213 + FLAM_C SINE Alu 1 133 0 2053 116 37 7 chr17 4227642 4227936 -85276617 - AluSp SINE Alu -10 303 1 2082 125 7 0 chr17 4227939 4228228 -85276325 - AluSx SINE Alu -21 291 1 1978 111 17 10 chr17 4228719 4229007 -85275546 - AluSg SINE Alu -20 290 1 441 270 146 74 chr17 4229382 4229815 -85274738 + L1MC4 LINE L1 7579 8042 0 1944 72 0 0 chr17 4229895 4230131 -85274422 - AluY SINE Alu -75 236 1 303 242 53 45 chr17 4230134 4230266 -85274287 - L1M1 LINE L1 -4139 3426 3294 938 149 24 0 chr17 4230326 4230494 -85274059 + L1MA8 LINE L1 6092 6263 -28 938 189 12 0 chr17 4230496 4230660 -85273893 + FRAM SINE Alu 1 163 -13 285 183 0 0 chr17 4230710 4230770 -85273783 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1628 182 0 30 chr17 4232089 4232386 -85272167 - AluJb SINE Alu -24 288 1 334 148 0 33 chr17 4232388 4232449 -85272104 - FLAM_A SINE Alu 0 133 75 282 253 32 32 chr17 4232479 4232574 -85271979 - L2 LINE L2 -11 3302 3208 2138 117 7 0 chr17 4232684 4232982 -85271571 + AluSx SINE Alu 1 300 -12 190 176 40 135 chr17 4233340 4233382 -85271171 - L2 LINE L2 -60 3253 3219 2146 124 0 0 chr17 4233382 4233680 -85270873 + AluY SINE Alu 1 298 -13 190 176 40 135 chr17 4233680 4233711 -85270842 - L2 LINE L2 -94 3219 3187 723 162 0 63 chr17 4234185 4234327 -85270226 + FLAM_C SINE Alu 1 133 0 2136 104 0 4 chr17 4234626 4234940 -85269613 - AluSc SINE Alu 0 313 1 670 177 15 23 chr17 4234940 4235070 -85269483 - FLAM_A SINE Alu -4 129 1 596 258 16 27 chr17 4235071 4235257 -85269296 - MIR SINE MIR -71 191 8 2183 134 0 0 chr17 4235507 4235805 -85268748 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 4235824 4235849 -85268704 + AT_rich Low_complexity Low_complexity 1 25 0 1321 182 22 85 chr17 4236760 4237078 -85267475 - AluJo SINE Alu -14 298 1 488 179 8 60 chr17 4237083 4237200 -85267353 - FLAM_A SINE Alu -13 129 19 931 114 0 8 chr17 4237204 4237336 -85267217 + AluJb SINE Alu 171 301 -11 2050 133 13 0 chr17 4237341 4237643 -85266910 + AluSg SINE Alu 1 306 -4 1979 137 3 13 chr17 4238404 4238717 -85265836 + AluJb SINE Alu 1 310 -2 200 318 123 26 chr17 4238738 4238933 -85265620 + L2 LINE L2 2083 2296 -1018 310 291 250 15 chr17 4239311 4239507 -85265046 + MIR SINE MIR 21 262 0 677 228 59 41 chr17 4239578 4239724 -85264829 + MIR SINE MIR 21 174 -88 2235 129 0 15 chr17 4239724 4240066 -85264487 + MER1B DNA MER1_type 1 337 0 677 228 59 41 chr17 4240066 4240138 -85264415 + MIR SINE MIR 174 243 -19 307 54 0 0 chr17 4240250 4240287 -85264266 + AluSp SINE Alu 132 168 -135 421 123 0 0 chr17 4240287 4240344 -85264209 + AluS SINE Alu 230 286 -24 1061 146 113 17 chr17 4240736 4240975 -85263578 - MER58B DNA MER1_type 0 341 80 225 232 24 110 chr17 4241017 4241099 -85263454 - MER58B DNA MER1_type -251 90 16 1060 186 15 51 chr17 4241973 4242247 -85262306 + L1ME1 LINE L1 4382 4645 -1501 1393 163 135 0 chr17 4242247 4242492 -85262061 - AluJo SINE Alu -17 295 18 1079 233 103 21 chr17 4242505 4242883 -85261670 + L1ME1 LINE L1 4634 5042 -1104 878 136 45 32 chr17 4242892 4243047 -85261506 + FAM SINE Alu 1 46 -3 3204 191 104 46 chr17 4243092 4243347 -85261206 + L1ME1 LINE L1 4980 5219 -947 2122 111 4 0 chr17 4243347 4243627 -85260926 + AluSx SINE Alu 21 301 -11 3204 191 104 46 chr17 4243627 4243859 -85260694 + L1ME1 LINE L1 5219 5436 -730 1610 172 62 10 chr17 4243859 4244150 -85260403 + AluJo SINE Alu 1 306 -6 3204 191 104 46 chr17 4244150 4244569 -85259984 + L1ME1 LINE L1 5436 5963 -203 1787 84 0 4 chr17 4244569 4244818 -85259735 + AluSx SINE Alu 58 305 0 3204 191 104 46 chr17 4244818 4245030 -85259523 + L1ME1 LINE L1 5963 6161 -5 1249 217 75 65 chr17 4245430 4245598 -85258955 + MLT1D LTR MaLR 3 168 -337 2461 81 3 0 chr17 4245598 4245906 -85258647 + AluY SINE Alu 1 309 -2 1249 217 75 65 chr17 4245906 4246231 -85258322 + MLT1D LTR MaLR 168 501 -4 210 321 0 0 chr17 4246482 4246535 -85258018 - MIR SINE MIR -155 107 55 2057 116 7 14 chr17 4246830 4247123 -85257430 - AluSq SINE Alu -22 291 1 2379 99 0 3 chr17 4247386 4247689 -85256864 - AluSg SINE Alu -8 302 1 261 191 48 16 chr17 4247833 4247896 -85256657 - L1ME LINE L1 -557 5564 5500 2111 46 81 0 chr17 4248213 4248473 -85256080 + AluSx SINE Alu 21 301 -11 3448 169 23 73 chr17 4249096 4249881 -85254672 - L1MB8 LINE L1 -5 6173 5428 2356 100 3 0 chr17 4250274 4250613 -85253940 + AluSx SINE Alu 1 340 0 1780 142 46 14 chr17 4250769 4251051 -85253502 + AluJb SINE Alu 1 291 -21 351 202 0 0 chr17 4251075 4251159 -85253394 + GA-rich Low_complexity Low_complexity 3 86 0 202 265 0 20 chr17 4251190 4251239 -85253314 - MIR SINE MIR -164 98 51 805 248 48 41 chr17 4251239 4251509 -85253044 + HsTC2c DNA Tc2 457 728 -1 437 175 38 0 chr17 4251925 4252005 -85252548 - LTR32 LTR ERVL -77 394 312 1964 134 31 0 chr17 4252402 4252693 -85251860 - AluSx SINE Alu -12 300 1 218 304 0 0 chr17 4253209 4253278 -85251275 + L2 LINE L2 2712 2780 -534 354 231 51 0 chr17 4253528 4253606 -85250947 + MER3 DNA MER1_type 1 82 -127 223 315 176 13 chr17 4253769 4254007 -85250546 + L2 LINE L2 2921 3197 -116 249 273 87 33 chr17 4254065 4254248 -85250305 - L2 LINE L2 -1 3312 3120 640 183 95 53 chr17 4254318 4254487 -85250066 + FRAM SINE Alu 1 40 0 236 262 182 27 chr17 4255191 4255378 -85249175 - MER112 DNA MER1_type -42 218 3 1122 162 0 0 chr17 4255381 4255554 -85248999 + AluSg/x SINE Alu 126 298 -14 1928 99 4 11 chr17 4255952 4256224 -85248329 - AluSg SINE Alu 0 310 41 2226 123 0 0 chr17 4256400 4256709 -85247844 + AluSx SINE Alu 1 309 -3 1719 105 9 4 chr17 4256822 4257051 -85247502 + AluSq SINE Alu 1 230 -83 346 257 50 30 chr17 4259631 4259732 -85244821 - MIR SINE MIR -155 107 5 1341 177 117 11 chr17 4260165 4260431 -85244122 - AluJb SINE Alu -14 298 5 1919 96 82 11 chr17 4261093 4261373 -85243180 - AluSp SINE Alu -13 300 1 2352 88 3 0 chr17 4261684 4261981 -85242572 - AluSx SINE Alu -14 298 1 1636 101 9 9 chr17 4262409 4262628 -85241925 - AluSq SINE Alu -94 219 1 2299 110 0 0 chr17 4262790 4263089 -85241464 - AluSg SINE Alu -11 299 1 282 255 158 9 chr17 4263512 4263656 -85240897 - MER5A DNA MER1_type -16 162 8 366 162 0 0 chr17 4264143 4264211 -85240342 - L1MA10 LINE L1 -2 6332 6265 2234 101 3 0 chr17 4264211 4264499 -85240054 + AluSp SINE Alu 1 289 -24 1188 155 0 0 chr17 4264504 4264678 -85239875 + AluSg/x SINE Alu 123 296 -16 2016 147 3 3 chr17 4265116 4265416 -85239137 + AluSx SINE Alu 1 300 -12 192 336 75 94 chr17 4266644 4266909 -85237644 - L2 LINE L2 -417 2897 2638 3369 188 26 39 chr17 4317421 4317542 -85187011 - L1MB7 LINE L1 -8 6176 6055 2255 114 0 0 chr17 4317542 4317840 -85186713 + AluSx SINE Alu 1 298 -14 3369 188 26 39 chr17 4317840 4318020 -85186533 - L1MB7 LINE L1 -129 6055 5874 2274 107 7 0 chr17 4318020 4318318 -85186235 + AluSx SINE Alu 1 300 -12 3369 188 26 39 chr17 4318318 4318818 -85185735 - L1MB7 LINE L1 -310 5874 5384 2179 90 0 17 chr17 4318837 4319127 -85185426 + AluSg1 SINE Alu 1 285 -24 1817 125 23 15 chr17 4319272 4319536 -85185017 - AluJb SINE Alu -46 266 1 297 217 56 133 chr17 4319796 4319917 -85184636 + MER58C DNA MER1_type 1 111 -104 2510 77 3 0 chr17 4319917 4320228 -85184325 + AluSp SINE Alu 1 312 -1 297 217 56 133 chr17 4320228 4320249 -85184304 + MER58C DNA MER1_type 111 132 -83 274 137 27 41 chr17 4321492 4321565 -85182988 + (CGGGG)n Simple_repeat Simple_repeat 2 73 0 343 308 34 0 chr17 4322126 4322243 -85182310 - MIR SINE MIR -1 261 141 1736 118 77 83 chr17 4322243 4322556 -85181997 - AluSx SINE Alu -1 311 1 801 185 7 0 chr17 4322557 4322692 -85181861 - AluSq/x SINE Alu -177 136 1 342 309 12 0 chr17 4322692 4322776 -85181777 - MIR SINE MIR -115 147 63 1584 96 9 9 chr17 4323278 4323507 -85181046 - AluSq SINE Alu -84 229 1 31 0 0 0 chr17 4325690 4325721 -85178832 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 4326178 4326200 -85178353 + GC_rich Low_complexity Low_complexity 1 22 0 945 137 37 19 chr17 4326635 4326796 -85177757 - AluJo SINE Alu -41 271 108 2330 92 3 0 chr17 4326805 4327108 -85177445 + AluSx SINE Alu 5 308 -4 1314 85 11 26 chr17 4327110 4327299 -85177254 + AluY SINE Alu 126 311 0 1135 116 18 0 chr17 4327562 4327726 -85176827 - AluSq SINE Alu -68 245 79 853 193 0 0 chr17 4328306 4328446 -85176107 - FLAM_C SINE Alu -3 140 1 2240 89 7 7 chr17 4328644 4328958 -85175595 - AluSp SINE Alu 0 314 1 2242 124 7 0 chr17 4329232 4329530 -85175023 - AluSx SINE Alu -12 300 1 667 169 0 17 chr17 4329621 4329739 -85174814 + FLAM_C SINE Alu 2 117 -26 2553 57 0 0 chr17 4329852 4330148 -85174405 - AluY SINE Alu -15 296 1 720 165 0 0 chr17 4330412 4330527 -85174026 - AluSc SINE Alu -52 257 143 1414 264 41 2 chr17 4330673 4331109 -85173444 + L2 LINE L2 2262 2714 -600 633 197 39 0 chr17 4331109 4331236 -85173317 + FLAM_C SINE Alu 2 133 0 2119 209 43 16 chr17 4331236 4331863 -85172690 + L1M4 LINE L1 3126 3769 -2377 2174 82 0 38 chr17 4331865 4332336 -85172217 + AluY SINE Alu 1 460 0 480 164 27 0 chr17 4332351 4332461 -85172092 + GA-rich Low_complexity Low_complexity 1 113 0 1393 115 6 0 chr17 4332591 4332774 -85171779 - AluSx SINE Alu -128 184 1 2233 103 3 3 chr17 4332774 4333076 -85171477 - AluSx SINE Alu -5 307 6 1895 132 24 14 chr17 4333083 4333379 -85171174 - AluSx SINE Alu -13 299 1 397 281 150 22 chr17 4333382 4333695 -85170858 + L2 LINE L2 524 876 -2438 2208 114 0 26 chr17 4333695 4334001 -85170552 - AluSg SINE Alu -7 303 6 2282 106 6 3 chr17 4334028 4334340 -85170213 - AluSq SINE Alu 0 313 1 2223 83 30 17 chr17 4334495 4334795 -85169758 + AluSc SINE Alu 1 304 -5 192 40 0 0 chr17 4335336 4335361 -85169192 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1162 106 5 96 chr17 4335509 4335735 -85168818 + AluSg/x SINE Alu 117 324 0 234 128 0 0 chr17 4335983 4336022 -85168531 + (CTCA)n Simple_repeat Simple_repeat 1 39 0 1306 88 0 0 chr17 4336035 4336205 -85168348 + AluSg/x SINE Alu 135 304 -6 186 362 39 16 chr17 4336241 4336368 -85168185 - L2 LINE L2 -2 3311 3182 766 181 44 111 chr17 4336620 4336890 -85167663 + AluJb SINE Alu 61 312 0 1381 105 0 0 chr17 4337669 4337841 -85166712 + AluSq SINE Alu 36 207 -106 1913 137 26 7 chr17 4338961 4339267 -85165286 + AluSq SINE Alu 1 312 -1 788 103 26 0 chr17 4339521 4339637 -85164916 - LTR8 LTR ERV1 0 691 573 2030 125 26 20 chr17 4339637 4339941 -85164612 - AluSq SINE Alu -6 307 2 1228 206 112 55 chr17 4339983 4340035 -85164518 + MLT1D LTR MaLR 1 49 -456 3156 135 6 21 chr17 4340035 4340570 -85163983 + MER1A DNA MER1_type 1 527 0 1228 206 112 55 chr17 4340570 4340919 -85163634 + MLT1D LTR MaLR 49 425 -80 2231 99 6 29 chr17 4340949 4341263 -85163290 - AluSq SINE Alu -6 307 1 2207 116 0 13 chr17 4341301 4341603 -85162950 - AluSx SINE Alu -14 298 1 1576 157 74 68 chr17 4341674 4341718 -85162835 + MSTD LTR MaLR 1 43 -353 2337 114 0 0 chr17 4341718 4342017 -85162536 - AluSq SINE Alu -12 301 3 1576 157 74 68 chr17 4342017 4342366 -85162187 + MSTD LTR MaLR 43 396 0 2311 107 7 0 chr17 4342392 4342691 -85161862 + AluSx SINE Alu 1 301 -11 366 133 17 0 chr17 4342693 4342753 -85161800 + AluJ/FLAM SINE Alu 1 61 -241 1711 167 38 0 chr17 4342899 4343163 -85161390 - AluJb SINE Alu -22 290 17 1016 178 45 107 chr17 4343163 4343277 -85161276 - L1MC5 LINE L1 -306 7655 7535 2504 73 3 0 chr17 4343277 4343579 -85160974 + AluSp SINE Alu 1 303 -10 1016 178 45 107 chr17 4343579 4343726 -85160827 - L1MC5 LINE L1 -426 7535 7431 2362 100 7 3 chr17 4343726 4344036 -85160517 + AluSq SINE Alu 1 311 -2 1016 178 45 107 chr17 4344036 4344222 -85160331 - L1MC5 LINE L1 -530 7431 7235 1388 167 4 4 chr17 4344241 4344469 -85160084 - AluJb SINE Alu 0 312 85 2332 93 7 0 chr17 4344526 4344826 -85159727 - AluSx SINE Alu -10 302 1 362 256 143 30 chr17 4344826 4344959 -85159594 + LTR67 LTR ERVL 28 175 -382 2202 121 13 0 chr17 4345019 4345325 -85159228 - AluY SINE Alu -1 310 1 676 252 57 24 chr17 4345391 4345601 -85158952 + LTR67 LTR ERVL 334 550 -7 1302 68 6 12 chr17 4345733 4345896 -85158657 - AluSx SINE Alu -150 162 1 241 273 98 35 chr17 4346002 4346145 -85158408 - L1ME LINE L1 -202 5919 5768 2432 81 3 0 chr17 4346154 4346449 -85158104 - AluSp SINE Alu -17 296 1 274 253 13 0 chr17 4346449 4346524 -85158029 - L1ME LINE L1 -2021 5787 5712 1035 176 20 39 chr17 4346539 4346583 -85157970 - L1MB3 LINE L1 0 6183 6140 2231 114 0 10 chr17 4346583 4346746 -85157807 - AluSx SINE Alu -16 296 136 2414 78 7 13 chr17 4346746 4347052 -85157501 - AluY SINE Alu -7 304 1 2231 114 0 10 chr17 4347052 4347187 -85157366 - AluSx SINE Alu -176 136 1 1035 176 20 39 chr17 4347187 4347397 -85157156 - L1MB3 LINE L1 -43 6140 5934 1687 176 4 7 chr17 4347398 4347677 -85156876 + AluJb SINE Alu 3 280 -32 260 51 0 26 chr17 4347681 4347720 -85156833 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2433 93 0 3 chr17 4347720 4348030 -85156523 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 4348030 4348053 -85156500 + AT_rich Low_complexity Low_complexity 1 23 0 366 194 11 43 chr17 4348053 4348146 -85156407 - L1MB3 LINE L1 -232 5948 5859 306 107 0 0 chr17 4348146 4348202 -85156351 - Alu SINE Alu 0 302 247 399 232 20 10 chr17 4348351 4348450 -85156103 - MLT1L LTR MaLR -108 507 408 1386 239 100 25 chr17 4348456 4348807 -85155746 - MLT1F LTR MaLR -4 538 148 2301 121 0 0 chr17 4348807 4349113 -85155440 - AluSx SINE Alu -6 306 1 1386 239 100 25 chr17 4349113 4349192 -85155361 - MLT1F LTR MaLR -394 148 76 2317 109 0 6 chr17 4349303 4349614 -85154939 - AluSq SINE Alu -4 309 1 268 326 22 0 chr17 4349706 4349798 -85154755 - MLT1L LTR MaLR -319 296 203 1965 130 27 0 chr17 4349892 4350185 -85154368 + AluSg SINE Alu 1 301 -9 338 258 57 48 chr17 4350262 4350386 -85154167 + L1ME4a LINE L1 5936 6060 -61 2338 110 0 0 chr17 4350474 4350773 -85153780 + AluSg SINE Alu 1 299 -11 439 367 41 7 chr17 4350902 4351196 -85153357 - L2 LINE L2 -816 2498 2195 756 176 8 0 chr17 4351200 4351353 -85153200 + FLAM_C SINE Alu 2 155 0 26 0 0 0 chr17 4351436 4351462 -85153091 + AT_rich Low_complexity Low_complexity 1 26 0 228 229 0 0 chr17 4351470 4351518 -85153035 - Alu SINE Alu -7 293 246 277 256 12 23 chr17 4351821 4351907 -85152646 + CT-rich Low_complexity Low_complexity 2 86 0 2449 84 0 0 chr17 4352019 4352315 -85152238 + AluSg SINE Alu 1 296 -14 1266 109 0 0 chr17 4352315 4352480 -85152073 + AluSg/x SINE Alu 132 296 -13 2426 100 0 0 chr17 4352491 4352802 -85151751 + AluY SINE Alu 1 311 0 2399 109 0 3 chr17 4352833 4353145 -85151408 + AluSq SINE Alu 1 311 -2 2266 116 0 0 chr17 4353277 4353578 -85150975 + AluSx SINE Alu 5 305 -7 2162 97 47 3 chr17 4353599 4353899 -85150654 + AluSp SINE Alu 1 313 0 1814 171 0 10 chr17 4354018 4354316 -85150237 + AluJo SINE Alu 15 309 -3 344 269 101 8 chr17 4354354 4354473 -85150080 - MIR SINE MIR -13 249 120 375 350 39 15 chr17 4355519 4355725 -85148828 - L1M4 LINE L1 -2693 3453 3243 2270 102 0 7 chr17 4355757 4356060 -85148493 - AluSc SINE Alu -8 301 1 2457 99 0 0 chr17 4356266 4356579 -85147974 - AluSq SINE Alu 0 313 1 808 218 62 6 chr17 4356589 4356768 -85147785 - AluJb SINE Alu 0 312 124 1520 123 20 0 chr17 4357206 4357410 -85147143 + AluSg/x SINE Alu 83 290 -20 323 271 98 53 chr17 4357410 4357543 -85147010 - L1M4 LINE L1 -3652 2494 2356 269 143 0 32 chr17 4357745 4357808 -85146745 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 1031 128 0 11 chr17 4357823 4358002 -85146551 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 646 186 9 0 chr17 4358002 4358116 -85146437 - FLAM_A SINE Alu -19 114 1 236 304 98 64 chr17 4358333 4358629 -85145924 + L2 LINE L2 2966 3271 -1 1657 222 19 91 chr17 4358656 4358729 -85145824 - L2 LINE L2 0 3313 3236 2127 113 0 3 chr17 4358729 4359032 -85145521 + AluSx SINE Alu 1 302 0 1657 222 19 91 chr17 4359032 4359560 -85144993 - L2 LINE L2 -77 3236 2758 741 317 94 39 chr17 4359773 4360136 -85144417 + L2 LINE L2 558 962 -2352 2303 95 0 13 chr17 4360136 4360440 -85144113 - AluSc SINE Alu -9 300 1 741 317 94 39 chr17 4360440 4360618 -85143935 + L2 LINE L2 962 1129 -2185 612 324 76 42 chr17 4360643 4360792 -85143761 - L2 LINE L2 0 3313 3171 1924 116 98 0 chr17 4360792 4361069 -85143484 + AluSx SINE Alu 1 304 -8 612 324 76 42 chr17 4361069 4361090 -85143463 - L2 LINE L2 -142 3171 3152 1640 191 0 23 chr17 4361090 4361225 -85143328 + AluJb SINE Alu 4 141 -171 2373 97 0 0 chr17 4361225 4361525 -85143028 + AluSq SINE Alu 3 302 -11 1640 191 0 23 chr17 4361525 4361692 -85142861 + AluJb SINE Alu 141 299 -13 612 324 76 42 chr17 4361692 4361900 -85142653 - L2 LINE L2 -161 3152 2921 696 162 0 0 chr17 4361958 4362063 -85142490 + FLAM_C SINE Alu 5 109 -34 51 0 0 0 chr17 4362106 4362157 -85142396 + AT_rich Low_complexity Low_complexity 1 51 0 599 329 63 77 chr17 4362160 4362342 -85142211 - L2 LINE L2 -416 2898 2715 2216 128 0 3 chr17 4362342 4362646 -85141907 - AluSx SINE Alu -5 307 5 599 329 63 77 chr17 4362646 4362658 -85141895 - L2 LINE L2 -599 2715 2704 2001 68 89 48 chr17 4362658 4362951 -85141602 - AluY SINE Alu -6 305 1 2033 129 31 0 chr17 4362952 4363238 -85141315 - AluSc SINE Alu -14 295 1 599 329 63 77 chr17 4363238 4363286 -85141267 - L2 LINE L2 -610 2704 2657 937 118 0 22 chr17 4363286 4363422 -85141131 + FLAM_C SINE Alu 1 133 0 599 329 63 77 chr17 4363422 4363855 -85140698 - L2 LINE L2 -657 2657 2228 1255 155 4 52 chr17 4363910 4364142 -85140411 + AluJo SINE Alu 86 306 -6 2238 125 3 0 chr17 4364144 4364455 -85140098 + AluSx SINE Alu 1 312 0 2454 90 0 0 chr17 4364458 4364770 -85139783 + AluSx SINE Alu 1 312 0 830 318 48 3 chr17 4364785 4365118 -85139435 - L2 LINE L2 -1161 2153 1806 1435 285 95 36 chr17 4365131 4365816 -85138737 - L2 LINE L2 -2066 1248 524 1913 126 48 3 chr17 4365819 4366112 -85138441 + AluSx SINE Alu 1 306 -6 402 217 12 0 chr17 4366117 4366200 -85138353 - BC200 scRNA scRNA -114 86 3 452 120 0 0 chr17 4366208 4366283 -85138270 - Alu SINE Alu -3 309 235 322 158 18 0 chr17 4366383 4366440 -85138113 + AluSp SINE Alu 125 182 -121 804 209 19 0 chr17 4366453 4366611 -85137942 - AluJo/FRAM SINE Alu -5 297 137 1305 172 32 48 chr17 4366614 4366864 -85137689 - AluJb SINE Alu -19 293 48 1187 147 0 0 chr17 4367579 4367749 -85136804 + AluSg/x SINE Alu 135 304 -6 2164 76 10 53 chr17 4367752 4368056 -85136497 + AluSc SINE Alu 1 291 -18 189 0 0 0 chr17 4368076 4368097 -85136456 + (TG)n Simple_repeat Simple_repeat 2 22 0 2250 96 0 17 chr17 4368299 4368623 -85135930 - AluY SINE Alu 0 311 1 1060 104 7 0 chr17 4368623 4368767 -85135786 - AluSq/x SINE Alu -167 145 1 909 192 0 0 chr17 4369166 4369322 -85135231 + FRAM SINE Alu 1 156 -20 759 113 96 0 chr17 4369459 4369574 -85134979 - AluSq/x SINE Alu -185 127 2 475 209 55 0 chr17 4370258 4370368 -85134185 - L1MC3 LINE L1 0 7785 7670 1654 112 0 0 chr17 4370412 4370626 -85133927 - AluSg SINE Alu -81 229 16 184 100 0 0 chr17 4371444 4371474 -85133079 + L2 LINE L2 2759 2788 -526 2179 127 3 10 chr17 4371633 4371947 -85132606 - AluSx SINE Alu 0 312 1 1685 139 79 7 chr17 4371951 4372254 -85132299 + Tigger1 DNA MER2_type 182 506 -1912 1143 157 0 0 chr17 4372275 4372441 -85132112 + FRAM SINE Alu 1 158 -18 2857 16 0 0 chr17 4372443 4372751 -85131802 + AluYa5 SINE Alu 1 308 -3 2082 148 3 0 chr17 4372753 4373057 -85131496 + AluSg SINE Alu 1 305 -5 1120 75 0 0 chr17 4373078 4373212 -85131341 + AluSg SINE Alu 1 134 -176 1971 109 4 0 chr17 4373212 4373469 -85131084 + AluSg SINE Alu 1 258 -52 2486 62 7 3 chr17 4373735 4374041 -85130512 + AluY SINE Alu 3 309 -2 1369 124 0 0 chr17 4374041 4374234 -85130319 + AluSg SINE Alu 118 310 0 1247 139 6 0 chr17 4374261 4374434 -85130119 + AluSg SINE Alu 6 179 -131 2005 126 0 0 chr17 4374570 4374840 -85129713 + AluSq SINE Alu 27 296 -17 391 273 70 98 chr17 4374843 4375206 -85129347 - L1MC4 LINE L1 -153 6703 5665 208 257 29 0 chr17 4375751 4375821 -85128732 + GA-rich Low_complexity Low_complexity 1 72 0 1194 122 74 0 chr17 4376443 4376611 -85127942 - AluSp SINE Alu 0 313 126 1763 146 7 17 chr17 4376611 4376905 -85127648 - AluSx SINE Alu -21 291 1 1194 122 74 0 chr17 4376905 4376951 -85127602 - AluSp SINE Alu -187 126 85 958 180 23 6 chr17 4376973 4377011 -85127542 - AluJo SINE Alu -137 175 139 2539 67 0 0 chr17 4377011 4377308 -85127245 - AluSx SINE Alu -15 297 1 958 180 23 6 chr17 4377308 4377441 -85127112 - AluJo SINE Alu -173 139 1 1613 199 3 7 chr17 4377523 4377815 -85126738 + AluJo SINE Alu 16 306 -6 2061 104 0 17 chr17 4377819 4378155 -85126398 + AluSq SINE Alu 1 331 0 345 255 120 32 chr17 4378359 4378575 -85125978 + L1MCa LINE L1 2469 2703 -3723 689 161 36 0 chr17 4378594 4378706 -85125847 + FLAM_A SINE Alu 1 116 -17 317 205 12 36 chr17 4378791 4378874 -85125679 + L1M4 LINE L1 5192 5272 -874 1596 183 47 9 chr17 4379020 4379364 -85125189 - L1M4 LINE L1 -1895 4251 3895 1046 160 28 0 chr17 4379368 4379549 -85125004 - AluSg/x SINE Alu -5 305 120 367 220 0 55 chr17 4379550 4379641 -85124912 - L1M4 LINE L1 -2277 3869 3784 2374 107 0 3 chr17 4379643 4379952 -85124601 - AluSx SINE Alu -4 308 1 2282 116 3 0 chr17 4379963 4380266 -85124287 - AluSp SINE Alu -9 304 1 375 137 0 3 chr17 4380286 4380357 -85124196 + MLT1F LTR MaLR 481 591 -4 2312 113 0 10 chr17 4381038 4381347 -85123206 - AluSx SINE Alu -6 306 1 335 293 188 17 chr17 4381466 4381705 -85122848 - L2 LINE L2 -4 3268 2989 2529 62 0 0 chr17 4381987 4382279 -85122274 - AluY SINE Alu -19 292 1 2208 125 0 3 chr17 4382456 4382761 -85121792 - AluSx SINE Alu -2 310 7 1218 160 18 36 chr17 4382769 4382988 -85121565 - AluJo SINE Alu -1 311 97 2415 87 6 3 chr17 4383143 4383454 -85121099 - AluSx SINE Alu 0 312 1 613 257 11 0 chr17 4383533 4383708 -85120845 - MER104 DNA MER2_type -3 177 1 1089 249 113 32 chr17 4383769 4384307 -85120246 - HAL1b LINE L1 -728 620 39 2038 98 18 4 chr17 4384498 4384774 -85119779 + AluSx SINE Alu 20 299 -13 923 184 17 17 chr17 4385073 4385247 -85119306 + AluJo SINE Alu 121 294 -18 2269 101 7 0 chr17 4385487 4385783 -85118770 - AluY SINE Alu -13 298 1 1086 92 14 0 chr17 4385785 4385927 -85118626 - AluSq/x SINE Alu -169 144 1 252 294 160 50 chr17 4386263 4386382 -85118171 - L2 LINE L2 0 3272 3141 414 245 152 22 chr17 4386710 4386894 -85117659 - L2 LINE L2 -456 2858 2651 533 63 76 13 chr17 4387424 4387503 -85117050 - AluS SINE Alu -228 85 2 306 0 0 0 chr17 4387742 4387776 -85116777 + (CA)n Simple_repeat Simple_repeat 2 35 0 2173 116 0 56 chr17 4387851 4388170 -85116383 + AluSq SINE Alu 7 307 -6 381 222 46 52 chr17 4388370 4388385 -85116168 - Charlie2a DNA MER1_type -12 2850 2836 858 143 0 8 chr17 4388385 4388518 -85116035 - FLAM_C SINE Alu 0 133 2 381 222 46 52 chr17 4388518 4388655 -85115898 - Charlie2a DNA MER1_type -26 2836 2699 * 599 221 32 32 chr17 4388649 4388839 -85115714 - Charlie2a DNA MER1_type -1206 1656 1467 797 259 62 35 chr17 4389034 4389324 -85115229 - Charlie2a DNA MER1_type -2561 301 4 2472 80 0 6 chr17 4390334 4390647 -85113906 + AluSq SINE Alu 1 311 -2 234 62 0 0 chr17 4390787 4390819 -85113734 + (CA)n Simple_repeat Simple_repeat 1 32 0 321 259 129 17 chr17 4391388 4391504 -85113049 - MIR SINE MIR -90 172 44 2263 104 0 3 chr17 4391677 4391975 -85112578 + AluY SINE Alu 5 301 -10 34 24 0 0 chr17 4392050 4392091 -85112462 + AT_rich Low_complexity Low_complexity 1 41 0 1323 147 9 9 chr17 4392242 4392453 -85112100 + AluSx SINE Alu 1 211 -101 366 149 0 0 chr17 4392454 4392517 -85112036 + AluSq/x SINE Alu 78 133 -170 1785 156 32 3 chr17 4392519 4392802 -85111751 + AluSx SINE Alu 7 297 -15 408 288 18 9 chr17 4392802 4392913 -85111640 - MIR SINE MIR -131 131 20 781 206 0 0 chr17 4392931 4393057 -85111496 - FLAM_A SINE Alu -7 126 1 2411 182 42 24 chr17 4393069 4393363 -85111190 - L1MB5 LINE L1 0 6174 5866 2243 119 0 3 chr17 4393363 4393666 -85110887 - AluSx SINE Alu -10 302 1 2411 182 42 24 chr17 4393666 4393876 -85110677 - L1MB5 LINE L1 -308 5866 5661 1459 153 0 36 chr17 4393876 4394125 -85110428 - AluSx SINE Alu 0 312 73 2430 91 0 0 chr17 4394125 4394420 -85110133 - AluY SINE Alu -14 297 1 450 145 0 0 chr17 4394420 4394482 -85110071 - AluSx SINE Alu -230 82 21 2247 117 0 7 chr17 4394504 4394812 -85109741 - AluSg SINE Alu -4 306 1 1676 153 40 45 chr17 4394812 4395086 -85109467 - L1MB5 LINE L1 -513 5667 5394 2241 143 0 0 chr17 4395086 4395394 -85109159 - AluSg SINE Alu -2 308 1 1676 153 40 45 chr17 4395394 4395471 -85109082 - L1MB5 LINE L1 -786 5394 5318 1047 182 0 0 chr17 4395483 4395642 -85108911 - FRAM SINE Alu -17 159 1 1310 240 127 83 chr17 4395685 4396022 -85108531 - L1MC4 LINE L1 0 8042 7721 2457 90 0 10 chr17 4396022 4396334 -85108219 - AluSg SINE Alu -1 309 1 1310 240 127 83 chr17 4396334 4396381 -85108172 - L1MC4 LINE L1 -321 7721 7678 2336 102 3 0 chr17 4396381 4396676 -85107877 - AluSp SINE Alu -17 296 1 1310 240 127 83 chr17 4396676 4396799 -85107754 - L1MC4 LINE L1 -364 7678 7562 1744 137 10 73 chr17 4396799 4397112 -85107441 - AluJb SINE Alu -19 293 1 1310 240 127 83 chr17 4397112 4397406 -85107147 - L1MC4 LINE L1 -480 7562 7204 897 136 0 0 chr17 4398363 4398481 -85106072 + AluJo/FLAM SINE Alu 1 118 -194 2455 74 0 35 chr17 4398481 4398793 -85105760 - AluSx SINE Alu -11 301 1 2235 102 10 0 chr17 4398793 4399087 -85105466 - AluSx SINE Alu -15 297 1 24 0 0 0 chr17 4399100 4399124 -85105429 + AT_rich Low_complexity Low_complexity 1 24 0 707 192 172 0 chr17 4399240 4399391 -85105162 - MIR SINE MIR -69 193 17 2164 98 26 16 chr17 4399586 4399891 -85104662 - AluSx SINE Alu -1 311 4 2636 43 3 0 chr17 4399899 4400200 -85104353 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 4400581 4400604 -85103949 + AT_rich Low_complexity Low_complexity 1 23 0 2000 134 10 0 chr17 4400732 4401022 -85103531 - AluSq SINE Alu -12 301 9 877 153 14 28 chr17 4401025 4401169 -85103384 - AluSg/x SINE Alu -46 266 125 1085 188 62 19 chr17 4401342 4401550 -85103003 - MER20 DNA MER1_type -2 217 1 1992 104 6 71 chr17 4401889 4402215 -85102338 - AluSx SINE Alu -7 305 1 278 222 19 0 chr17 4402263 4402317 -85102236 - MIR SINE MIR -8 254 200 2239 126 0 0 chr17 4402318 4402627 -85101926 - AluSx SINE Alu -3 309 1 2059 145 0 3 chr17 4402636 4402932 -85101621 - AluSx SINE Alu -17 295 1 2266 93 3 3 chr17 4402953 4403242 -85101311 - AluSp SINE Alu -24 289 1 2096 99 58 3 chr17 4403990 4404283 -85100270 - AluSc SINE Alu 0 309 1 2293 108 6 10 chr17 4404887 4405201 -85099352 - AluSp SINE Alu 0 313 1 758 225 55 5 chr17 4405217 4405435 -85099118 + L1MD2 LINE L1 5099 5327 -819 801 213 0 18 chr17 4405435 4405599 -85098954 + FRAM SINE Alu 1 154 -22 1217 178 19 16 chr17 4405599 4405857 -85098696 + L1MD2 LINE L1 5324 5582 -777 22 0 0 0 chr17 4405914 4405936 -85098617 + AT_rich Low_complexity Low_complexity 1 22 0 838 161 0 0 chr17 4405936 4406054 -85098499 - FLAM_C SINE Alu -25 118 1 533 68 0 0 chr17 4406056 4406129 -85098424 - AluSp/q SINE Alu -13 300 228 703 175 186 5 chr17 4406162 4406356 -85098197 + L1MD2 LINE L1 5920 6148 -211 1280 135 122 16 chr17 4406402 4406647 -85097906 - MER44D DNA MER2_type 0 605 280 418 165 22 33 chr17 4406663 4406754 -85097799 - MER44D DNA MER2_type -544 161 72 211 250 17 17 chr17 4407099 4407159 -85097394 + MIR SINE MIR 6 65 -197 2284 99 3 3 chr17 4407161 4407463 -85097090 - AluSq SINE Alu -11 302 1 1807 96 12 0 chr17 4407481 4407721 -85096832 + AluSp SINE Alu 54 296 -17 1394 184 52 42 chr17 4407770 4408079 -85096474 - AluJo SINE Alu 0 312 1 1831 110 43 7 chr17 4408314 4408615 -85095938 + THE1C LTR MaLR 63 374 -1 598 139 0 30 chr17 4408626 4408727 -85095826 - FLAM_C SINE Alu -6 137 40 207 0 0 0 chr17 4408753 4408776 -85095777 + (A)n Simple_repeat Simple_repeat 1 23 0 240 267 43 26 chr17 4409060 4409176 -85095377 - MIR SINE MIR -10 252 135 * 2792 258 110 58 chr17 4409130 4410205 -85094348 + L2 LINE L2 1401 2753 -560 1282 176 200 4 chr17 4410205 4410455 -85094098 + AluJo SINE Alu 1 299 -3 2792 258 110 58 chr17 4410455 4411047 -85093506 + L2 LINE L2 2753 3313 0 503 100 0 0 chr17 4411166 4411236 -85093317 + AluSq SINE Alu 1 70 -243 851 149 0 37 chr17 4411236 4411397 -85093156 + AluSp/q SINE Alu 159 313 0 1452 155 76 49 chr17 4411403 4411707 -85092846 + AluJo SINE Alu 1 312 0 225 30 0 0 chr17 4412008 4412041 -85092512 - L1PA16 LINE L1 -5 6161 6129 2410 80 0 3 chr17 4413242 4413553 -85091000 - AluSg SINE Alu 0 310 1 305 289 11 11 chr17 4413612 4413702 -85090851 - L2 LINE L2 -4 3268 3179 2293 81 0 35 chr17 4413918 4414228 -85090325 + AluSx SINE Alu 1 299 -13 2230 78 26 3 chr17 4414878 4415184 -85089369 - AluSq SINE Alu 0 313 1 372 399 26 21 chr17 4415449 4415642 -85088911 + MIR SINE MIR 21 214 -48 557 200 50 0 chr17 4415732 4415857 -85088696 + MER53 DNA DNA 2 139 -50 1924 132 4 0 chr17 4415857 4416163 -85088390 + AluSx SINE Alu 1 307 0 557 200 50 0 chr17 4416163 4416196 -85088357 + MER53 DNA DNA 139 169 -20 1313 168 0 42 chr17 4416196 4416434 -85088119 - AluJb SINE Alu -1 311 84 889 147 0 0 chr17 4416587 4416723 -85087830 + AluSg/x SINE Alu 176 311 -1 201 39 0 0 chr17 4416723 4416749 -85087804 + (GA)n Simple_repeat Simple_repeat 1 26 0 726 62 0 0 chr17 4416749 4416845 -85087708 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1956 137 3 13 chr17 4417854 4418154 -85086399 - AluSq SINE Alu -16 297 1 1966 105 14 27 chr17 4418201 4418518 -85086035 - AluSp SINE Alu 0 313 1 270 0 0 0 chr17 4418520 4418550 -85086003 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1716 83 9 0 chr17 4418550 4418779 -85085774 - AluSg1 SINE Alu -29 280 50 937 107 0 0 chr17 4418779 4418910 -85085643 - AluSq/x SINE Alu -178 135 5 1211 132 5 44 chr17 4419023 4419259 -85085294 - AluJb SINE Alu 0 312 85 617 255 25 45 chr17 4419273 4419473 -85085080 + L1MC4a LINE L1 5512 5707 -2101 2402 82 0 13 chr17 4419473 4419790 -85084763 - AluSp SINE Alu 0 313 1 830 58 0 0 chr17 4419801 4419904 -85084649 - AluY SINE Alu -23 288 186 334 228 172 17 chr17 4419904 4420084 -85084469 + L1MC4a LINE L1 5704 5911 -1897 1660 125 95 8 chr17 4420113 4420401 -85084152 + AluSg SINE Alu 1 310 0 1677 152 48 21 chr17 4420407 4420696 -85083857 + AluJb SINE Alu 1 297 -15 2334 82 0 0 chr17 4420702 4420996 -85083557 + AluSc SINE Alu 1 294 -15 198 0 0 0 chr17 4421008 4421030 -85083523 + (CA)n Simple_repeat Simple_repeat 2 23 0 306 353 16 16 chr17 4421307 4421429 -85083124 + MIR3 SINE MIR 73 194 -14 2234 89 7 10 chr17 4421473 4421777 -85082776 + AluSx SINE Alu 1 303 -9 1926 119 20 0 chr17 4421777 4422070 -85082483 + AluSx SINE Alu 1 300 -12 272 255 224 0 chr17 4422722 4422820 -85081733 + MIR3 SINE MIR 36 155 -53 235 246 0 18 chr17 4422809 4422866 -85081687 + MER5A DNA MER1_type 112 167 -22 * 2040 116 3 3 chr17 4422883 4423177 -85081376 - AluSx SINE Alu -18 294 1 279 219 0 0 chr17 4423384 4423425 -85081128 + A-rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr17 4423432 4423454 -85081099 + GC_rich Low_complexity Low_complexity 1 22 0 23 40 0 0 chr17 4423512 4423537 -85081016 + GC_rich Low_complexity Low_complexity 1 25 0 241 328 0 0 chr17 4423539 4423600 -85080953 + A-rich Low_complexity Low_complexity 1 61 0 2139 101 0 26 chr17 4424108 4424416 -85080137 - AluSx SINE Alu -12 300 1 2306 90 0 3 chr17 4425269 4425570 -85078983 - AluSq SINE Alu -13 300 1 351 277 129 9 chr17 4426183 4426315 -85078238 + MIR3 SINE MIR 37 163 -45 180 274 105 21 chr17 4426231 4426326 -85078227 - L2 LINE L2 -1876 1438 1336 * 375 375 44 13 chr17 4427018 4427247 -85077306 + MIR SINE MIR 22 257 -5 240 363 113 29 chr17 4427480 4427684 -85076869 + L3 LINE CR1 1311 1531 -46 183 328 118 8 chr17 4428721 4428840 -85075713 - L2 LINE L2 -175 3097 2966 204 272 90 0 chr17 4428939 4429046 -85075507 + MIR3 SINE MIR 99 215 -31 248 327 27 0 chr17 4429414 4429524 -85075029 + MIR SINE MIR 23 135 -73 185 196 43 0 chr17 4429659 4429705 -85074848 - MIR SINE MIR -118 144 97 203 83 28 28 chr17 4430126 4430162 -85074391 + (TCC)n Simple_repeat Simple_repeat 3 38 0 458 203 30 0 chr17 4430163 4430296 -85074257 + CT-rich Low_complexity Low_complexity 2 138 0 1085 165 6 0 chr17 4430303 4430473 -85074080 - AluJb SINE Alu -7 305 135 224 30 30 0 chr17 4430474 4430507 -85074046 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1924 125 0 41 chr17 4430507 4430802 -85073751 - AluSq SINE Alu -30 283 1 1495 101 0 0 chr17 4431135 4431334 -85073219 - AluSc SINE Alu 0 309 111 1889 129 0 37 chr17 4431556 4431873 -85072680 - AluSx SINE Alu 0 306 1 251 291 88 9 chr17 4431912 4432026 -85072527 + MIR SINE MIR 28 147 -71 1058 156 78 0 chr17 4432026 4432205 -85072348 - AluJo SINE Alu -47 265 73 189 246 90 30 chr17 4432508 4432642 -85071911 - L2 LINE L2 -2418 896 755 322 314 105 8 chr17 4433302 4433340 -85071213 - MIR SINE MIR -110 152 119 1748 113 109 22 chr17 4433340 4433615 -85070938 + AluSg SINE Alu 1 299 -11 322 314 105 8 chr17 4433615 4433700 -85070853 - MIR SINE MIR -143 119 17 199 239 0 0 chr17 4433780 4433826 -85070727 - MIR SINE MIR -112 150 105 243 315 55 16 chr17 4433949 4434076 -85070477 + L2 LINE L2 2923 3054 -218 2332 77 0 26 chr17 4434585 4434896 -85069657 - AluSg SINE Alu -7 303 1 2273 92 0 0 chr17 4434896 4435188 -85069365 - AluSx SINE Alu -20 292 1 229 172 0 47 chr17 4435951 4436006 -85068547 - FAM SINE Alu -136 179 126 1516 141 0 0 chr17 4436006 4436226 -85068327 - AluJo SINE Alu -92 220 1 1024 130 59 18 chr17 4436481 4436670 -85067883 - AluSg/x SINE Alu 0 312 121 2273 113 0 0 chr17 4436679 4436990 -85067563 - AluSx SINE Alu -1 311 1 1891 169 0 0 chr17 4437085 4437386 -85067167 + AluJo SINE Alu 1 301 -11 216 0 0 0 chr17 4438738 4438762 -85065791 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 2126 103 7 0 chr17 4438984 4439294 -85065259 + AluSx SINE Alu 1 312 0 1964 129 3 35 chr17 4439313 4439624 -85064929 + AluSx SINE Alu 1 301 -11 204 250 36 27 chr17 4439630 4439742 -85064811 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 306 250 50 0 chr17 4440423 4440503 -85064050 + MIR SINE MIR 82 165 -97 2311 85 3 3 chr17 4440541 4440848 -85063705 - AluSq SINE Alu -6 307 1 1167 246 131 65 chr17 4440853 4441313 -85063240 - MLT1G1 LTR MaLR 0 595 90 1720 172 3 3 chr17 4441313 4441609 -85062944 + AluSx SINE Alu 1 296 -16 1167 246 131 65 chr17 4441609 4441704 -85062849 - MLT1G1 LTR MaLR -505 90 3 801 247 128 45 chr17 4441993 4442127 -85062426 - L2 LINE L2 -1 3312 3191 2293 101 0 0 chr17 4442127 4442424 -85062129 + AluSg SINE Alu 1 297 -13 2109 106 3 10 chr17 4442425 4442727 -85061826 + AluSx SINE Alu 1 300 -12 801 247 128 45 chr17 4442727 4443147 -85061406 - L2 LINE L2 -121 3192 2708 441 293 105 38 chr17 4443152 4443524 -85061029 - MLT1H LTR MaLR 0 549 153 1916 119 10 17 chr17 4443541 4443836 -85060717 - AluSx SINE Alu -19 293 1 249 273 0 91 chr17 4443836 4443957 -85060596 - MLT1H LTR MaLR -419 123 14 1432 195 18 131 chr17 4443970 4444024 -85060529 - L2 LINE L2 -607 2707 2649 617 184 22 44 chr17 4444024 4444160 -85060393 + FLAM_C SINE Alu 1 133 0 1432 195 18 131 chr17 4444160 4444557 -85059996 - L2 LINE L2 -665 2649 2307 850 63 16 8 chr17 4444562 4444688 -85059865 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2015 96 7 4 chr17 4444689 4444969 -85059584 - AluSq SINE Alu -32 281 1 1902 134 0 7 chr17 4444978 4445268 -85059285 - AluJb SINE Alu -24 288 1 1429 127 0 9 chr17 4445310 4445523 -85059030 + AluSg/x SINE Alu 93 303 -9 388 141 343 20 chr17 4445523 4445622 -85058931 - L2 LINE L2 -1020 2294 2164 1009 132 18 150 chr17 4445989 4446031 -85058522 - L1MB8 LINE L1 0 6184 6138 2115 105 3 0 chr17 4446031 4446317 -85058236 + AluSx SINE Alu 3 289 -23 1009 132 18 150 chr17 4446317 4446600 -85057953 - L1MB8 LINE L1 -46 6138 5902 751 248 34 41 chr17 4446676 4446807 -85057746 - HAL1b LINE L1 -451 897 767 2228 106 3 0 chr17 4446807 4447108 -85057445 - AluSp SINE Alu -11 302 1 751 248 34 41 chr17 4447108 4447271 -85057282 - HAL1b LINE L1 -581 767 605 2101 141 0 0 chr17 4447338 4447650 -85056903 - AluJb SINE Alu 0 312 1 2269 87 3 3 chr17 4447745 4448043 -85056510 - AluSx SINE Alu -14 298 1 180 111 0 0 chr17 4448066 4448093 -85056460 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1914 148 19 16 chr17 4448661 4448972 -85055581 - AluJb SINE Alu 0 312 1 1900 122 37 10 chr17 4449275 4449571 -85054982 - AluSq SINE Alu -9 304 1 229 351 0 6 chr17 4450801 4450975 -85053578 + (TG)n Simple_repeat Simple_repeat 1 173 0 253 354 54 0 chr17 4451819 4451949 -85052604 - MIR3 SINE MIR -9 199 63 2313 95 0 9 chr17 4453838 4454153 -85050400 - AluSx SINE Alu 0 312 1 424 293 38 15 chr17 4454678 4454811 -85049742 - MIR SINE MIR -38 170 35 2214 92 7 0 chr17 4454828 4455122 -85049431 - AluSq SINE Alu -17 296 1 700 269 23 0 chr17 4455601 4455776 -85048777 + MIR SINE MIR 23 201 -61 212 254 18 0 chr17 4455918 4455973 -85048580 - L3 LINE CR1 -102 1475 1420 255 250 157 0 chr17 4456113 4456223 -85048330 + MIR SINE MIR 38 172 -63 264 204 0 0 chr17 4456411 4456465 -85048088 - L3 LINE CR1 -291 1286 1233 339 282 183 12 chr17 4456882 4457205 -85047348 - L2 LINE L2 -1437 1877 1500 494 261 17 52 chr17 4457473 4457683 -85046870 + MIR SINE MIR 5 203 -59 2332 91 3 0 chr17 4457757 4458064 -85046489 - AluSc SINE Alu -1 308 1 197 307 85 53 chr17 4458102 4458149 -85046404 - L3 LINE CR1 -3 1574 1530 581 256 26 37 chr17 4458149 4458340 -85046213 - MER5A DNA MER1_type 0 189 1 197 307 85 53 chr17 4458340 4458481 -85046072 - L3 LINE CR1 -47 1530 1380 576 282 164 14 chr17 4459968 4460188 -85044365 + MIR SINE MIR 2 254 -8 2187 127 0 0 chr17 4460191 4460499 -85044054 - AluSx SINE Alu -4 308 1 279 294 104 31 chr17 4460884 4461047 -85043506 - L2 LINE L2 -172 3100 2926 497 313 38 0 chr17 4461126 4461263 -85043290 - MIR SINE MIR -89 173 28 2313 90 6 0 chr17 4461263 4461574 -85042979 - AluSq SINE Alu 0 313 1 497 313 38 0 chr17 4461574 4461596 -85042957 - MIR SINE MIR -234 28 8 1420 267 91 9 chr17 4462555 4462770 -85041783 - L2 LINE L2 -1 3312 3116 2286 87 13 0 chr17 4462770 4463070 -85041483 + AluSg SINE Alu 1 304 -6 1420 267 91 9 chr17 4463070 4463607 -85040946 - L2 LINE L2 -197 3116 2500 2222 103 10 0 chr17 4464306 4464607 -85039946 - AluSq SINE Alu -9 304 1 1740 162 7 23 chr17 4465609 4465918 -85038635 + AluSx SINE Alu 1 304 -8 2263 75 17 0 chr17 4467008 4467301 -85037252 - AluSp SINE Alu -15 298 1 917 139 0 7 chr17 4467302 4467439 -85037114 - AluSq/x SINE Alu -177 136 1 252 314 25 16 chr17 4467722 4467843 -85036710 - LTR67 LTR ERVL -2 555 434 2198 112 26 0 chr17 4468087 4468392 -85036161 + AluSp SINE Alu 1 313 0 214 365 52 26 chr17 4468437 4468552 -85036001 + MIR3 SINE MIR 89 206 -2 450 253 106 88 chr17 4468984 4469257 -85035296 - L2 LINE L2 0 3272 2995 2322 64 0 10 chr17 4469585 4469880 -85034673 - AluY SINE Alu -19 292 1 199 211 0 0 chr17 4470788 4470826 -85033727 - MIR SINE MIR -62 146 109 358 252 17 50 chr17 4471223 4471342 -85033211 - MIR SINE MIR -64 144 30 21 36 0 0 chr17 4472170 4472198 -85032355 + GC_rich Low_complexity Low_complexity 1 28 0 304 183 25 33 chr17 4472346 4472466 -85032087 + (CCG)n Simple_repeat Simple_repeat 1 119 0 34 0 0 0 chr17 4472500 4472534 -85032019 + GC_rich Low_complexity Low_complexity 1 34 0 331 303 38 23 chr17 4473405 4473537 -85031016 + MIR3 SINE MIR 23 156 -52 266 385 96 0 chr17 4473759 4473894 -85030659 - MIR3 SINE MIR -13 195 48 494 278 14 4 chr17 4474878 4475034 -85029519 - MIR3 SINE MIR -61 147 3 2388 84 3 0 chr17 4475151 4475461 -85029092 + AluSx SINE Alu 1 311 -1 435 268 43 0 chr17 4475550 4475688 -85028865 + MER103 DNA DNA 21 164 -2 625 175 0 58 chr17 4475882 4476002 -85028551 - AluJo SINE Alu -11 301 189 1975 110 40 0 chr17 4476021 4476293 -85028260 + AluSx SINE Alu 2 284 -28 262 204 0 0 chr17 4476385 4476439 -85028114 + AluJ/monomer SINE Alu 247 300 -1 21 36 0 0 chr17 4476439 4476467 -85028086 + AT_rich Low_complexity Low_complexity 1 28 0 931 169 42 0 chr17 4476496 4476662 -85027891 - AluJo SINE Alu -125 187 15 495 350 104 30 chr17 4476678 4477101 -85027452 + L2 LINE L2 2195 2668 -646 2304 93 0 3 chr17 4477101 4477403 -85027150 - AluSx SINE Alu -11 301 1 495 350 104 30 chr17 4477403 4477519 -85027034 + L2 LINE L2 2668 2774 -540 906 71 0 0 chr17 4477534 4477647 -85026906 + AluSc SINE Alu 1 113 -196 4588 56 15 7 chr17 4477758 4478478 -85026075 + SVA Other Other 316 1157 -229 1061 117 111 6 chr17 4478503 4478674 -85025879 + AluSg/x SINE Alu 102 290 -20 887 299 95 50 chr17 4481163 4481608 -85022945 + HAL1 LINE L1 1060 1558 -949 1806 169 0 0 chr17 4481608 4481903 -85022650 - AluJo SINE Alu -13 299 5 887 299 95 50 chr17 4481903 4482245 -85022308 + HAL1 LINE L1 1558 1883 -624 21 0 0 0 chr17 4482293 4482314 -85022239 + AT_rich Low_complexity Low_complexity 1 21 0 2309 66 7 0 chr17 4482321 4482610 -85021943 + AluY SINE Alu 1 291 -20 200 136 0 68 chr17 4482748 4482792 -85021761 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2065 67 32 21 chr17 4483028 4483313 -85021240 + AluSp SINE Alu 1 288 -25 762 80 0 0 chr17 4483422 4483522 -85021031 + AluSg/x SINE Alu 198 297 -15 2242 102 3 3 chr17 4483654 4483967 -85020586 + AluSp SINE Alu 1 313 0 1975 131 7 0 chr17 4483973 4484263 -85020290 + AluSx SINE Alu 1 292 -20 3945 128 134 43 chr17 4484402 4485813 -85018740 - pTR5 LTR ERV1 0 2438 742 542 189 23 23 chr17 4485880 4486012 -85018541 - LTR45 LTR ERV1 0 525 394 2248 41 24 10 chr17 4486052 4486345 -85018208 + AluY SINE Alu 1 297 -14 2196 240 121 40 chr17 4486700 4486893 -85017660 + HAL1 LINE L1 261 437 -2070 2196 86 0 0 chr17 4486893 4487200 -85017353 + AluSg SINE Alu 1 307 0 2196 240 121 40 chr17 4487200 4488116 -85016437 + HAL1 LINE L1 437 1460 -1047 24 0 0 0 chr17 4488116 4488140 -85016413 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr17 4488345 4488377 -85016176 + AT_rich Low_complexity Low_complexity 1 32 0 611 68 0 0 chr17 4489163 4489237 -85015316 + AluSp/q SINE Alu 216 289 -24 2226 91 44 0 chr17 4489247 4489544 -85015009 + AluSq SINE Alu 1 310 -3 343 276 95 9 chr17 4489626 4489836 -85014717 + L1MC4a LINE L1 6026 6253 -1555 2117 102 0 32 chr17 4489865 4490180 -85014373 - AluY SINE Alu -6 305 1 611 68 0 0 chr17 4490190 4490264 -85014289 - AluSp/q SINE Alu -24 289 216 2365 85 0 0 chr17 4490535 4490842 -85013711 + AluSx SINE Alu 1 307 -5 1520 194 33 0 chr17 4491154 4491453 -85013100 - AluJb SINE Alu 0 308 1 1387 180 3 42 chr17 4494761 4494921 -85009632 - AluJo SINE Alu -19 293 147 2281 86 0 19 chr17 4494921 4495235 -85009318 - AluSq SINE Alu -5 308 1 1387 180 3 42 chr17 4495235 4495358 -85009195 - AluJo SINE Alu -165 147 21 2294 80 3 13 chr17 4495540 4495840 -85008713 + AluSx SINE Alu 1 297 -15 548 314 105 0 chr17 4496302 4496493 -85008060 + MIR SINE MIR 42 252 -10 2007 134 7 3 chr17 4496501 4496807 -85007746 + AluJb SINE Alu 1 307 -5 2197 101 7 0 chr17 4496991 4497288 -85007265 + AluSx SINE Alu 1 299 -13 2298 119 0 0 chr17 4497817 4498128 -85006425 + AluSx SINE Alu 1 311 -1 527 354 134 29 chr17 4498371 4498848 -85005705 - L3 LINE CR1 -50 1527 1001 658 51 0 0 chr17 4499260 4499339 -85005214 + AluSq/x SINE Alu 57 135 -178 2415 87 0 0 chr17 4499339 4499650 -85004903 + AluSq SINE Alu 1 311 -2 553 155 124 72 chr17 4499743 4499937 -85004616 + MER46A DNA MER2_type 32 235 -1 244 281 25 8 chr17 4500101 4500142 -85004411 - HAL1b LINE L1 0 1348 1309 1800 153 14 0 chr17 4500142 4500417 -85004136 + AluJo SINE Alu 1 279 -33 291 28 0 0 chr17 4500418 4500454 -85004099 + (CAAT)n Simple_repeat Simple_repeat 4 39 0 244 281 25 8 chr17 4500454 4500531 -85004022 - HAL1b LINE L1 -38 1310 1226 1701 181 0 20 chr17 4500536 4500835 -85003718 - AluJb SINE Alu -19 293 1 251 197 0 45 chr17 4502987 4503053 -85001500 + (CTGGGG)n Simple_repeat Simple_repeat 2 64 0 2022 128 3 3 chr17 4503122 4503420 -85001133 - AluSx SINE Alu -14 298 1 448 304 131 0 chr17 4503621 4503835 -85000718 + LTR33 LTR ERVL 41 282 -239 330 260 30 0 chr17 4503909 4504009 -85000544 + LTR33 LTR ERVL 417 519 -2 360 256 103 0 chr17 4504415 4504532 -85000021 + MIR3 SINE MIR 58 186 -22 275 239 147 91 chr17 4505440 4505725 -84998828 + L2 LINE L2 2950 3250 -22 2078 112 0 3 chr17 4507461 4507795 -84996758 - AluSx SINE Alu 0 333 1 182 189 0 0 chr17 4509130 4509167 -84995386 + L2 LINE L2 3028 3064 -208 244 236 0 42 chr17 4509267 4509339 -84995214 - L3 LINE CR1 -108 1469 1401 278 270 79 53 chr17 4510176 4510328 -84994225 + MIR3 SINE MIR 3 158 -50 240 357 29 53 chr17 4510337 4510508 -84994045 - MIR SINE MIR -22 240 74 242 388 165 0 chr17 4510759 4510965 -84993588 - L2 LINE L2 -95 3177 2938 218 284 154 79 chr17 4511337 4511695 -84992858 - L2 LINE L2 -917 2397 1980 2441 87 0 0 chr17 4511695 4512007 -84992546 + AluSx SINE Alu 1 312 0 218 284 154 79 chr17 4512007 4512208 -84992345 - L2 LINE L2 -1333 1981 1796 245 340 32 53 chr17 4512984 4513172 -84991381 - MIR3 SINE MIR -20 188 5 239 338 64 39 chr17 4514884 4515118 -84989435 + L2 LINE L2 2170 2409 -905 258 32 0 0 chr17 4515418 4515449 -84989104 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 4517034 4517055 -84987498 + GC_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr17 4517465 4517511 -84987042 + GC_rich Low_complexity Low_complexity 1 46 0 322 237 29 58 chr17 4519882 4520021 -84984532 - MIR3 SINE MIR -73 135 1 183 287 73 45 chr17 4520157 4520404 -84984149 + L2 LINE L2 2021 2274 -1040 405 0 0 0 chr17 4520579 4520624 -84983929 + (CA)n Simple_repeat Simple_repeat 1 45 0 212 355 86 0 chr17 4520649 4520742 -84983811 + L2 LINE L2 3209 3309 -4 271 287 104 9 chr17 4520772 4520887 -84983666 - L2 LINE L2 -789 2525 2400 2130 119 0 34 chr17 4520894 4521214 -84983339 + AluSx SINE Alu 1 309 -3 2296 94 0 7 chr17 4522533 4522842 -84981711 + AluSx SINE Alu 1 307 -5 1331 34 0 53 chr17 4522879 4523088 -84981465 + SVA Other Other 1 198 -1188 868 126 47 126 chr17 4523620 4523786 -84980767 - Charlie5 DNA MER1_type 0 2585 2448 2245 83 3 17 chr17 4523786 4524088 -84980465 + AluSx SINE Alu 1 298 -14 868 126 47 126 chr17 4524088 4524198 -84980355 - Charlie5 DNA MER1_type -137 2448 2331 275 357 170 6 chr17 4524251 4524433 -84980120 + MIR SINE MIR 45 256 -6 205 282 103 0 chr17 4524790 4524868 -84979685 - MIR SINE MIR -62 146 61 199 250 225 15 chr17 4525690 4525815 -84978738 - MIR SINE MIR -68 140 19 180 345 58 23 chr17 4526705 4526792 -84977761 + L2 LINE L2 2987 3076 -196 1051 216 11 42 chr17 4529111 4529375 -84975178 - MIR SINE MIR 0 262 7 345 294 43 49 chr17 4529998 4530161 -84974392 + MER5A DNA MER1_type 24 185 -4 208 306 69 0 chr17 4530152 4530224 -84974329 - MIR3 SINE MIR -39 169 93 * 1027 166 0 0 chr17 4530983 4531146 -84973407 + AluJb SINE Alu 134 296 -16 216 365 78 17 chr17 4531155 4531385 -84973168 - L2 LINE L2 -1544 1770 1527 195 222 37 19 chr17 4532116 4532170 -84972383 - L2 LINE L2 -212 3060 3006 307 310 77 36 chr17 4532561 4532730 -84971823 + MIR3 SINE MIR 3 183 -63 230 337 12 0 chr17 4532939 4533022 -84971531 - L2 LINE L2 -213 3059 2976 384 282 46 23 chr17 4533632 4533763 -84970790 + MIR SINE MIR 66 199 -63 357 281 0 0 chr17 4534324 4534459 -84970094 + (TG)n Simple_repeat Simple_repeat 1 135 0 294 414 37 0 chr17 4536934 4537096 -84967457 - MIR SINE MIR -59 203 36 2339 99 0 3 chr17 4537723 4538036 -84966517 + AluSx SINE Alu 1 312 0 370 325 20 54 chr17 4538154 4538357 -84966196 - L2 LINE L2 -85 3187 2992 227 222 22 74 chr17 4538411 4538546 -84966007 + L1MEd LINE L1 73 200 -5919 295 178 22 44 chr17 4538616 4538706 -84965847 - L1MC5 LINE L1 -35 7926 7839 783 304 66 68 chr17 4538939 4539068 -84965485 + L1MEd LINE L1 583 711 -5408 2173 86 10 3 chr17 4539068 4539360 -84965193 + AluSq SINE Alu 1 294 -19 783 304 66 68 chr17 4539360 4539716 -84964837 + L1MEd LINE L1 711 1067 -5052 188 391 30 17 chr17 4539782 4539935 -84964618 - L2 LINE L2 -455 2859 2701 2539 52 3 0 chr17 4539935 4540245 -84964308 + AluY SINE Alu 1 311 0 188 391 30 17 chr17 4540245 4540321 -84964232 - L2 LINE L2 -613 2701 2627 322 263 30 20 chr17 4541758 4541857 -84962696 + MIR3 SINE MIR 56 155 -53 437 262 111 8 chr17 4542415 4542541 -84962012 + MIR SINE MIR 13 151 -111 267 375 0 0 chr17 4542724 4542828 -84961725 + L2 LINE L2 2988 3091 -181 502 306 61 25 chr17 4543142 4543250 -84961303 - MIR SINE MIR -24 238 118 1902 207 39 42 chr17 4543250 4543609 -84960944 - MER63B DNA MER1_type -629 433 74 2207 105 0 0 chr17 4543609 4543905 -84960648 + AluSx SINE Alu 1 296 -16 1902 207 39 42 chr17 4543905 4543979 -84960574 - MER63B DNA MER1_type -988 74 1 502 306 61 25 chr17 4543979 4544066 -84960487 - MIR SINE MIR -144 118 36 227 191 32 32 chr17 4544228 4544291 -84960262 + CT-rich Low_complexity Low_complexity 1 63 0 956 275 53 77 chr17 4544591 4544849 -84959704 + L2 LINE L2 2702 2964 -349 2086 107 3 10 chr17 4544849 4545147 -84959406 + AluSx SINE Alu 1 296 -16 956 275 53 77 chr17 4545147 4545178 -84959375 + L2 LINE L2 2964 2994 -319 1776 111 96 4 chr17 4545178 4545448 -84959105 + AluSx SINE Alu 1 295 -17 956 275 53 77 chr17 4545448 4545702 -84958851 + L2 LINE L2 2994 3307 -6 394 243 59 52 chr17 4545766 4545902 -84958651 + MIR3 SINE MIR 12 148 -60 532 272 26 101 chr17 4545904 4546095 -84958458 + MIR SINE MIR 2 169 -93 2101 127 3 0 chr17 4546095 4546394 -84958159 + AluSx SINE Alu 1 300 -12 532 272 26 101 chr17 4546394 4546470 -84958083 + MIR SINE MIR 169 249 -13 457 258 8 32 chr17 4547152 4547276 -84957277 + MIR3 SINE MIR 7 127 -81 573 270 100 15 chr17 4547375 4547575 -84956978 + MIR SINE MIR 46 262 0 364 265 39 10 chr17 4547581 4547683 -84956870 + L3 LINE CR1 1399 1503 -74 199 111 44 0 chr17 4547864 4547909 -84956644 - L2 LINE L2 -212 3060 3014 2319 109 0 0 chr17 4548013 4548325 -84956228 + AluSq SINE Alu 1 312 -1 203 352 48 8 chr17 4548346 4548471 -84956082 - L2 LINE L2 -481 2833 2704 300 409 48 0 chr17 4548825 4549033 -84955520 + L1ME2 LINE L1 4572 4789 -1357 1073 273 74 34 chr17 4549196 4549716 -84954837 + L1ME2 LINE L1 5247 5802 -362 2261 100 0 0 chr17 4549716 4550015 -84954538 - AluSq SINE Alu -14 299 1 1073 273 74 34 chr17 4550015 4550112 -84954441 + L1ME2 LINE L1 5802 5894 -270 2016 102 3 56 chr17 4550147 4550470 -84954083 - AluSq SINE Alu -7 306 1 1587 179 3 14 chr17 4550479 4550622 -84953931 - AluJo SINE Alu -25 287 144 2304 99 0 0 chr17 4550622 4550926 -84953627 - AluSg1 SINE Alu -5 304 1 1587 179 3 14 chr17 4550926 4551072 -84953481 - AluJo SINE Alu -168 144 1 1887 112 63 0 chr17 4551101 4551386 -84953167 + AluSg SINE Alu 1 303 -7 520 189 24 0 chr17 4553782 4553909 -84950644 + (TCCA)n Simple_repeat Simple_repeat 3 132 0 181 299 112 28 chr17 4554122 4554229 -84950324 - MIR SINE MIR -72 136 21 258 250 21 31 chr17 4558370 4558466 -84946087 + CT-rich Low_complexity Low_complexity 5 99 0 213 219 183 0 chr17 4559413 4559495 -84945058 + MIR SINE MIR 21 117 -91 1712 136 19 30 chr17 4560461 4560498 -84944055 + LTR47A LTR ERVL 13 49 -403 2050 99 3 65 chr17 4560498 4560820 -84943733 - AluSx SINE Alu -10 302 1 1712 136 19 30 chr17 4560820 4561177 -84943376 + LTR47A LTR ERVL 49 452 0 2118 120 0 13 chr17 4561198 4561514 -84943039 - AluSx SINE Alu 0 312 1 1745 221 85 38 chr17 4561523 4562133 -84942420 - L1M4 LINE L1 -892 5254 4616 1931 148 3 0 chr17 4562162 4562460 -84942093 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr17 4562493 4562522 -84942031 + (TA)n Simple_repeat Simple_repeat 2 30 0 2334 79 0 7 chr17 4562522 4562825 -84941728 - AluSc SINE Alu -8 301 1 705 215 77 127 chr17 4562825 4563230 -84941323 + MLT1G3 LTR MaLR 106 595 0 2056 108 0 26 chr17 4563307 4563612 -84940941 + AluSx SINE Alu 1 297 -15 1828 80 0 4 chr17 4563744 4563983 -84940570 + AluY SINE Alu 1 238 -73 234 0 0 0 chr17 4563986 4564012 -84940541 + (A)n Simple_repeat Simple_repeat 1 26 0 322 73 18 18 chr17 4564733 4564788 -84939765 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 111 10 3 chr17 4565138 4565436 -84939117 + AluSx SINE Alu 1 300 -12 2412 81 0 0 chr17 4565822 4566129 -84938424 - AluSx SINE Alu -5 307 1 945 304 84 35 chr17 4566129 4566643 -84937910 - L1MC4a LINE L1 -977 6831 6293 2182 99 0 3 chr17 4566645 4566939 -84937614 + AluSx SINE Alu 1 293 -19 790 270 43 13 chr17 4566942 4567175 -84937378 - L1MC4a LINE L1 -2001 5807 5568 568 212 150 16 chr17 4567178 4567371 -84937182 - L1MC4a LINE L1 -2258 5550 5332 2230 97 0 22 chr17 4567374 4567694 -84936859 - AluSp SINE Alu 0 313 1 204 125 0 0 chr17 4567716 4567748 -84936805 + (TG)n Simple_repeat Simple_repeat 2 33 0 1894 120 11 4 chr17 4567748 4568024 -84936529 - AluSx SINE Alu -34 278 1 1879 160 3 13 chr17 4568055 4568362 -84936191 + AluJb SINE Alu 1 304 -8 452 313 28 17 chr17 4568380 4568559 -84935994 + L2 LINE L2 2550 2730 -584 741 193 7 0 chr17 4568628 4568768 -84935785 - LTR64 LTR ERVK -415 143 3 214 254 73 0 chr17 4568874 4568929 -84935624 + L2 LINE L2 3148 3206 -66 2361 58 3 26 chr17 4568950 4569261 -84935292 - AluY SINE Alu -7 304 1 2072 106 3 7 chr17 4571157 4571460 -84933093 + AluSq SINE Alu 1 302 -11 24 32 0 0 chr17 4571484 4571515 -84933038 + AT_rich Low_complexity Low_complexity 1 31 0 2175 106 0 7 chr17 4571520 4571821 -84932732 - AluSq SINE Alu -14 299 1 1154 150 19 33 chr17 4571825 4571988 -84932565 - AluJo SINE Alu -18 294 130 233 0 62 0 chr17 4571988 4572020 -84932533 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2024 71 18 18 chr17 4572020 4572302 -84932251 - AluY SINE Alu -29 282 1 1154 150 19 33 chr17 4572302 4572350 -84932203 - AluJo SINE Alu -180 132 85 637 170 30 0 chr17 4572419 4572519 -84932034 - U6 snRNA snRNA -4 103 1 2026 125 0 0 chr17 4572625 4572922 -84931631 + AluSx SINE Alu 1 297 -15 2176 101 7 3 chr17 4572957 4573265 -84931288 + AluSg SINE Alu 1 309 -1 397 181 21 0 chr17 4573265 4573359 -84931194 + GA-rich Low_complexity Low_complexity 1 96 0 870 71 11 50 chr17 4573361 4573543 -84931010 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 505 285 85 41 chr17 4573553 4573848 -84930705 - HAL1 LINE L1 -84 2423 2116 897 300 98 23 chr17 4573899 4574390 -84930163 + MLT1G LTR MaLR 10 555 0 1666 236 83 48 chr17 4574391 4574934 -84929619 + L2 LINE L2 2381 2942 -372 2356 266 123 36 chr17 4574942 4576162 -84928391 - HAL1 LINE L1 -439 2068 743 1759 141 19 44 chr17 4576178 4576582 -84927971 - AluSp SINE Alu 0 396 1 240 261 11 45 chr17 4576598 4576686 -84927867 - HAL1 LINE L1 -1783 724 640 357 338 109 42 chr17 4576714 4577117 -84927436 - HAL1 LINE L1 -2076 431 2 379 296 23 38 chr17 4577261 4577393 -84927160 + MIR SINE MIR 133 262 0 181 263 0 0 chr17 4577780 4577818 -84926735 + MIR SINE MIR 42 79 -129 526 240 113 70 chr17 4577825 4578054 -84926499 + MIR SINE MIR 20 258 -4 2115 84 0 7 chr17 4578409 4578722 -84925831 - AluSq SINE Alu 0 313 3 2338 93 0 0 chr17 4578854 4579156 -84925397 - AluSx SINE Alu -10 302 1 1220 242 31 92 chr17 4579558 4580132 -84924421 + MER34 LTR ERV1 1 539 -3 2134 91 14 0 chr17 4581568 4581855 -84922698 - AluSp SINE Alu -22 291 1 1874 103 46 4 chr17 4582075 4582356 -84922197 + AluSq SINE Alu 1 293 -20 2382 89 0 6 chr17 4582509 4582822 -84921731 + AluSx SINE Alu 1 311 -1 29 0 0 0 chr17 4583198 4583227 -84921326 + AT_rich Low_complexity Low_complexity 1 29 0 2260 90 0 3 chr17 4583227 4583526 -84921027 + AluSq SINE Alu 1 298 -15 1252 151 5 23 chr17 4583696 4583914 -84920639 + AluJb SINE Alu 85 298 -14 231 188 0 0 chr17 4584027 4584075 -84920478 + GA-rich Low_complexity Low_complexity 4 51 0 614 237 132 26 chr17 4585133 4585323 -84919230 - MER63A DNA MER1_type 0 210 1 3652 128 11 5 chr17 4586311 4586864 -84917689 + L1PA15 LINE L1 5606 6161 -4 1079 145 0 31 chr17 4586962 4587155 -84917398 - AluSg/x SINE Alu -5 305 119 473 209 18 67 chr17 4587174 4587364 -84917189 - MER106B DNA MER1_type -5 1054 856 2008 84 4 0 chr17 4587364 4587625 -84916928 + AluSq SINE Alu 1 262 -51 225 0 0 0 chr17 4587627 4587652 -84916901 + (TAA)n Simple_repeat Simple_repeat 2 26 0 473 209 18 67 chr17 4587652 4587720 -84916833 - MER106B DNA MER1_type -204 855 1 2045 117 10 10 chr17 4587816 4588114 -84916439 + AluSx SINE Alu 1 298 -14 214 346 55 16 chr17 4589606 4589733 -84914820 + L2 LINE L2 3180 3311 -2 1633 139 17 50 chr17 4590076 4590378 -84914175 - AluJb SINE Alu -20 292 1 460 263 2 14 chr17 4590406 4590543 -84914010 - MIR SINE MIR -62 146 16 203 354 0 0 chr17 4593479 4593561 -84910992 + G-rich Low_complexity Low_complexity 6 87 0 262 139 0 0 chr17 4593981 4594024 -84910529 - MIR SINE MIR -9 253 211 195 220 0 0 chr17 4594720 4594770 -84909783 + (CACG)n Simple_repeat Simple_repeat 2 51 0 2089 97 3 32 chr17 4595349 4595659 -84908894 - AluSg SINE Alu -9 301 1 226 333 37 37 chr17 4595732 4595867 -84908686 + L2 LINE L2 3129 3263 -9 2174 119 0 0 chr17 4596058 4596370 -84908183 - AluSx SINE Alu 0 312 1 1318 268 106 34 chr17 4596505 4597056 -84907497 - L1MC4a LINE L1 -588 5563 5396 2223 102 0 3 chr17 4597056 4597361 -84907192 - AluSq SINE Alu -9 304 1 1318 268 106 34 chr17 4597361 4597381 -84907172 - L1MC4a LINE L1 -755 5396 5379 621 221 40 137 chr17 4597577 4597703 -84906850 + MLT1F-int LTR MaLR 1078 1215 -156 2124 113 10 0 chr17 4597703 4598004 -84906549 + AluSq SINE Alu 3 306 -7 621 221 40 137 chr17 4598004 4598198 -84906355 + MLT1F-int LTR MaLR 1215 1367 -4 1613 217 36 74 chr17 4598204 4598651 -84905902 + MLT1F LTR MaLR 2 431 -111 1061 191 11 0 chr17 4598677 4598866 -84905687 - AluJb SINE Alu -8 304 114 2057 112 0 19 chr17 4598994 4599328 -84905225 - AluSx SINE Alu 0 312 3 1601 171 27 13 chr17 4599854 4599978 -84904575 + AluJo SINE Alu 3 124 -188 2208 107 0 3 chr17 4599978 4600286 -84904267 + AluSx SINE Alu 1 307 -5 1601 171 27 13 chr17 4600286 4600459 -84904094 + AluJo SINE Alu 124 304 -8 2151 88 14 10 chr17 4600529 4600826 -84903727 + AluSx SINE Alu 1 298 -14 1113 174 19 31 chr17 4601389 4601679 -84902874 - MER89 LTR ERV1 -170 389 1 773 201 41 106 chr17 4601679 4601972 -84902581 - L1ME LINE L1 -628 5538 5265 758 83 0 0 chr17 4602121 4602217 -84902336 + AluSc SINE Alu 201 296 -13 23 0 0 0 chr17 4603139 4603162 -84901391 + AT_rich Low_complexity Low_complexity 1 23 0 205 276 0 26 chr17 4604008 4604084 -84900469 + (TG)n Simple_repeat Simple_repeat 1 74 0 230 274 0 0 chr17 4608875 4608937 -84895616 + C-rich Low_complexity Low_complexity 6 67 0 2063 92 0 27 chr17 4609930 4610222 -84894331 - AluSg SINE Alu -26 284 1 1974 133 10 0 chr17 4610710 4611004 -84893549 - AluSg SINE Alu -13 297 1 271 317 125 0 chr17 4611457 4611577 -84892976 + MIR SINE MIR 95 229 -33 200 184 0 0 chr17 4612592 4612630 -84891923 + (GGCTG)n Simple_repeat Simple_repeat 4 41 0 2061 104 9 35 chr17 4613292 4613610 -84890943 + AluSq SINE Alu 1 310 -3 241 242 13 41 chr17 4614491 4614603 -84889950 + MIR SINE MIR 10 114 -94 * 311 349 61 28 chr17 4614586 4614798 -84889755 - MIR SINE MIR -3 259 41 744 156 0 0 chr17 4614825 4614934 -84889619 - FRAM SINE Alu -58 118 10 2310 92 0 0 chr17 4615224 4615519 -84889034 + AluSq SINE Alu 1 295 -18 2018 109 46 0 chr17 4616635 4616919 -84887634 - AluSx SINE Alu -15 297 1 198 208 21 21 chr17 4616990 4617038 -84887515 - MIR SINE MIR -186 76 29 1192 234 72 16 chr17 4617221 4617528 -84887025 + MER33 DNA MER1_type 1 324 0 320 311 116 66 chr17 4619490 4619792 -84884761 - L2 LINE L2 0 3313 2997 558 300 191 10 chr17 4619917 4620304 -84884249 - L2 LINE L2 -537 2777 2321 2282 89 0 7 chr17 4621109 4621413 -84883140 - AluSq SINE Alu -11 302 1 1688 186 0 0 chr17 4621414 4621723 -84882830 - AluJo SINE Alu 0 312 2 992 248 66 106 chr17 4624952 4625327 -84879226 + L1ME3A LINE L1 5690 6042 -128 2210 103 6 10 chr17 4625327 4625639 -84878914 - AluSq SINE Alu -2 311 1 992 248 66 106 chr17 4625639 4625764 -84878789 + L1ME3A LINE L1 6042 6170 0 359 299 86 0 chr17 4625891 4626008 -84878545 - MER5A DNA MER1_type -4 185 59 612 323 50 0 chr17 4626749 4626969 -84877584 + MIR SINE MIR 26 256 -6 213 39 0 0 chr17 4627041 4627067 -84877486 + (CA)n Simple_repeat Simple_repeat 1 26 0 215 227 0 0 chr17 4627089 4627133 -84877420 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 634 241 59 18 chr17 4627134 4627304 -84877249 + MER5B DNA MER1_type 2 178 0 202 254 8 164 chr17 4627317 4627439 -84877114 + MER5B DNA MER1_type 17 119 -59 2225 104 0 3 chr17 4627446 4627744 -84876809 - AluSq SINE Alu -16 297 1 372 253 0 0 chr17 4628068 4628151 -84876402 - ERVL LTR ERVL -3757 2007 1925 824 77 0 0 chr17 4628160 4628264 -84876289 - AluSg/x SINE Alu -10 300 197 548 293 95 31 chr17 4628301 4628436 -84876117 + HERVL LTR ERVL 2333 2458 -3196 2091 94 18 0 chr17 4628436 4628795 -84875758 - AluSx SINE Alu 0 364 1 548 293 95 31 chr17 4628795 4628843 -84875710 + HERVL LTR ERVL 2458 2501 -3153 2217 121 0 0 chr17 4628843 4629148 -84875405 - AluSx SINE Alu -7 305 1 548 293 95 31 chr17 4629148 4629256 -84875297 + HERVL LTR ERVL 2501 2645 -3009 572 259 30 55 chr17 4629281 4629517 -84875036 + LTR67 LTR ERVL 328 557 0 2171 93 43 10 chr17 4630030 4630332 -84874221 - AluSx SINE Alu 0 312 1 207 0 0 0 chr17 4630342 4630365 -84874188 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1367 94 0 6 chr17 4630387 4630568 -84873985 - AluSp SINE Alu -133 180 1 1504 213 94 43 chr17 4630642 4631154 -84873399 - LTR55 LTR ERV -10 538 1 1622 175 11 0 chr17 4631304 4631573 -84872980 - AluJo SINE Alu -4 308 37 2062 140 3 13 chr17 4631610 4631925 -84872628 - AluSx SINE Alu 0 312 1 2221 108 0 3 chr17 4632092 4632397 -84872156 - AluSx SINE Alu -5 307 4 265 143 200 0 chr17 4632424 4632494 -84872059 - MER105 DNA DNA 0 204 121 2108 107 3 10 chr17 4632890 4633189 -84871364 + AluSx SINE Alu 3 299 -13 649 268 49 0 chr17 4633220 4633444 -84871109 + L1MB2 LINE L1 5936 6170 -1 282 56 0 0 chr17 4633586 4633622 -84870931 + (TG)n Simple_repeat Simple_repeat 1 36 0 775 172 8 0 chr17 4634272 4634394 -84870159 - FLAM_C SINE Alu -18 125 3 210 37 0 0 chr17 4634425 4634452 -84870101 + (TA)n Simple_repeat Simple_repeat 1 27 0 2327 82 0 0 chr17 4634452 4634746 -84869807 - AluSg SINE Alu -16 294 1 23 33 0 0 chr17 4636367 4636397 -84868156 + AT_rich Low_complexity Low_complexity 1 30 0 2420 222 65 29 chr17 4636464 4637053 -84867500 - L1ME1 LINE L1 -108 6058 5435 795 88 0 0 chr17 4637053 4637166 -84867387 + (TG)n Simple_repeat Simple_repeat 2 114 0 2420 222 65 29 chr17 4637166 4637324 -84867229 - L1ME1 LINE L1 -731 5435 5284 819 149 0 0 chr17 4637324 4637458 -84867095 - AluSp/q SINE Alu -5 308 175 270 0 0 0 chr17 4638276 4638306 -84866247 + (TG)n Simple_repeat Simple_repeat 1 30 0 526 190 0 74 chr17 4638307 4638478 -84866075 - MIR SINE MIR -26 236 82 1585 115 27 103 chr17 4638993 4639324 -84865229 + AluYb8 SINE Alu 4 309 -9 206 264 217 39 chr17 4640221 4640350 -84864203 - L2 LINE L2 -219 3053 2902 2265 92 3 0 chr17 4690875 4691180 -84813373 - AluY SINE Alu -5 306 1 29 0 0 0 chr17 4691250 4691279 -84813274 + AT_rich Low_complexity Low_complexity 1 29 0 579 157 10 0 chr17 4691361 4691463 -84813090 - AluJb SINE Alu 0 312 210 720 155 0 0 chr17 4691631 4691734 -84812819 - FRAM SINE Alu -37 139 37 451 93 0 13 chr17 4691734 4691809 -84812744 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 4691809 4692107 -84812446 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 4692117 4692251 -84812302 + AluJb SINE Alu 1 135 -177 2172 99 14 3 chr17 4692251 4692544 -84812009 + AluSg SINE Alu 1 296 -14 363 149 15 0 chr17 4692992 4693059 -84811494 - AluJ/FLAM SINE Alu -230 72 5 849 178 33 75 chr17 4693102 4693141 -84811412 - MIR SINE MIR -35 227 188 2321 83 3 0 chr17 4693141 4693441 -84811112 - AluSx SINE Alu -11 301 1 849 178 33 75 chr17 4693441 4693615 -84810938 - MIR SINE MIR -74 188 23 1550 98 5 0 chr17 4694014 4694219 -84810334 + AluSx SINE Alu 1 206 -106 800 196 0 18 chr17 4695726 4695889 -84808664 - AluSq SINE Alu -153 160 1 253 302 113 19 chr17 4695895 4696001 -84808552 - MIR3 SINE MIR -33 175 60 356 301 30 23 chr17 4697094 4697227 -84807326 - MIR SINE MIR -116 146 13 1358 132 0 18 chr17 4698500 4698720 -84805833 - AluSq SINE Alu -9 304 89 1100 107 153 11 chr17 4698721 4698898 -84805655 - AluSx SINE Alu -56 256 55 1343 77 0 11 chr17 4699005 4699187 -84805366 + AluY SINE Alu 127 306 -5 783 167 13 0 chr17 4699190 4699340 -84805213 - L1M4 LINE L1 -1254 4892 4741 290 47 47 0 chr17 4699341 4699384 -84805169 + (TTTTC)n Simple_repeat Simple_repeat 4 48 0 2144 110 10 0 chr17 4699398 4699698 -84804855 - AluSg SINE Alu -7 303 1 1885 183 23 76 chr17 4699698 4699930 -84804623 - L1M4 LINE L1 -1657 4489 4246 1731 107 133 0 chr17 4699930 4700193 -84804360 - AluSg SINE Alu -2 298 1 1885 183 23 76 chr17 4700193 4700529 -84804024 - L1M4 LINE L1 -1900 4246 3951 1036 160 59 0 chr17 4700542 4700729 -84803824 - AluSg/x SINE Alu -1 309 112 525 148 0 12 chr17 4700832 4700913 -84803640 + AluSg/x SINE Alu 214 293 -17 2466 62 0 0 chr17 4700917 4701222 -84803331 + AluY SINE Alu 1 305 -6 445 276 41 8 chr17 4701466 4701589 -84802964 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 4702175 4702268 -84802285 + GA-rich Low_complexity Low_complexity 3 90 0 2456 34 3 10 chr17 4703961 4704257 -84800296 + AluY SINE Alu 3 296 -15 1011 70 0 0 chr17 4705207 4705336 -84799217 + AluY SINE Alu 163 291 -20 1026 243 27 0 chr17 4707006 4707265 -84797288 - MER58B DNA MER1_type 0 341 76 334 154 31 0 chr17 4707265 4707330 -84797223 + AluJ/FLAM SINE Alu 1 67 -235 866 169 0 7 chr17 4707430 4707566 -84796987 - AluJo SINE Alu -129 183 49 897 161 0 0 chr17 4707570 4707713 -84796840 + AluJb SINE Alu 164 306 -6 4818 96 0 85 chr17 4707741 4708049 -84796504 + LTR8 LTR ERV1 1 334 -357 2305 85 7 0 chr17 4708049 4708356 -84796197 + AluSx SINE Alu 3 311 -1 4818 96 0 85 chr17 4708356 4708801 -84795752 + LTR8 LTR ERV1 334 690 -1 1065 79 11 96 chr17 4709117 4709295 -84795258 - AluSx SINE Alu -10 300 138 2554 43 0 3 chr17 4711589 4711893 -84792660 + AluY SINE Alu 1 303 -8 943 61 0 0 chr17 4712121 4712236 -84792317 - AluSx SINE Alu -173 139 25 1510 107 0 30 chr17 4713075 4713308 -84791245 + AluSg/x SINE Alu 87 312 0 2081 126 0 3 chr17 4713997 4714306 -84790247 + AluSx SINE Alu 1 308 -4 427 76 0 51 chr17 4715242 4715312 -84789241 + Alu SINE Alu 233 305 -7 2495 43 0 10 chr17 4715312 4715616 -84788937 + AluY SINE Alu 1 301 -10 615 148 157 0 chr17 4715618 4715733 -84788820 + FLAM_C SINE Alu 1 133 0 2074 108 10 3 chr17 4715738 4716034 -84788519 + AluSp SINE Alu 1 298 -15 2178 98 0 7 chr17 4716041 4716336 -84788217 + AluSq SINE Alu 1 293 -20 208 303 13 13 chr17 4716485 4716561 -84787992 + L2 LINE L2 3016 3091 -181 2273 66 0 10 chr17 4716749 4717063 -84787490 + AluSx SINE Alu 1 311 0 1697 135 13 50 chr17 4717203 4717506 -84787047 + AluJo SINE Alu 1 292 -20 327 344 26 20 chr17 4717577 4717728 -84786825 + L2 LINE L2 3150 3301 -12 2295 86 0 3 chr17 4717787 4718088 -84786465 + AluSc SINE Alu 1 300 -9 182 296 155 0 chr17 4718088 4718159 -84786394 - MIR SINE MIR -116 146 65 1036 208 13 22 chr17 4718159 4718390 -84786163 + AluJo SINE Alu 71 299 -13 1865 125 4 4 chr17 4718397 4718678 -84785875 + AluY SINE Alu 5 285 -26 31 0 0 0 chr17 4718678 4718709 -84785844 + AT_rich Low_complexity Low_complexity 1 31 0 927 142 0 0 chr17 4718741 4718882 -84785671 - AluJb SINE Alu -4 308 168 2088 85 0 4 chr17 4719003 4719274 -84785279 - AluSg SINE Alu -40 270 1 2203 87 0 31 chr17 4719287 4719608 -84784945 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 4719800 4719937 -84784616 - AluSq/x SINE Alu -180 133 1 210 214 31 133 chr17 4722812 4722862 -84781691 + L2 LINE L2 2971 3008 -264 2275 77 3 3 chr17 4722862 4723161 -84781392 - AluSp SINE Alu -14 299 1 210 214 31 133 chr17 4723161 4723208 -84781345 + L2 LINE L2 3008 3058 -214 540 170 0 0 chr17 4723226 4723320 -84781233 - AluJ/FRAM SINE Alu -3 309 216 435 293 60 20 chr17 4723377 4723527 -84781026 + L2 LINE L2 3117 3272 0 268 360 82 19 chr17 4723645 4723912 -84780641 - L3b LINE CR1 -196 1387 1104 2305 100 3 0 chr17 4725007 4725316 -84779237 + AluSx SINE Alu 1 310 -2 279 0 0 0 chr17 4726240 4726271 -84778282 + (A)n Simple_repeat Simple_repeat 1 31 0 2216 97 3 3 chr17 4726288 4726587 -84777966 + AluSc SINE Alu 2 300 -9 232 103 0 0 chr17 4727014 4727053 -84777500 + L1M2 LINE L1 5742 5780 -520 858 171 0 38 chr17 4727055 4727213 -84777340 + FRAM SINE Alu 1 152 -24 2316 102 0 6 chr17 4727224 4727538 -84777015 + AluSx SINE Alu 1 312 0 2021 181 8 31 chr17 4727554 4727809 -84776744 + L1PB4 LINE L1 5785 6030 -126 2138 95 27 0 chr17 4727809 4728103 -84776450 + AluSx SINE Alu 1 302 -10 2021 181 8 31 chr17 4728103 4728228 -84776325 + L1PB4 LINE L1 6030 6156 0 448 225 0 0 chr17 4728247 4728327 -84776226 + AluJ/FLAM SINE Alu 5 84 -228 337 308 0 54 chr17 4728462 4728647 -84775906 + C-rich Low_complexity Low_complexity 2 176 0 275 293 20 14 chr17 4728709 4728856 -84775697 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 4729242 4729292 -84775261 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 4729822 4729862 -84774691 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 4730592 4730728 -84773825 + MIR SINE MIR 40 188 -74 341 83 133 0 chr17 4731710 4731770 -84772783 - AluS SINE Alu -235 68 1 671 148 16 41 chr17 4731810 4731932 -84772621 + FLAM_C SINE Alu 11 129 -14 1977 128 27 3 chr17 4731963 4732259 -84772294 + AluSx SINE Alu 1 303 -9 1610 179 18 4 chr17 4732816 4733126 -84771427 - AluJb SINE Alu 0 314 1 2037 116 3 3 chr17 4733138 4733454 -84771099 - AluSx SINE Alu 0 316 1 1818 145 0 26 chr17 4733457 4733767 -84770786 - AluSx SINE Alu -10 302 1 241 216 39 0 chr17 4733782 4733833 -84770720 - MER66A LTR ERV1 -143 335 283 2551 203 71 50 chr17 4733867 4733909 -84770644 + L1MC4 LINE L1 7181 7221 -821 2129 81 7 42 chr17 4733909 4734217 -84770336 + AluSq SINE Alu 1 297 -16 2551 203 71 50 chr17 4734217 4735017 -84769536 + L1MC4 LINE L1 7221 8041 -1 1573 180 13 28 chr17 4735089 4735406 -84769147 - AluJb SINE Alu 0 312 1 321 341 40 8 chr17 4735846 4735972 -84768581 - MIR SINE MIR -59 149 20 2006 111 7 0 chr17 4740961 4741264 -84763289 + AluSx SINE Alu 1 305 0 379 298 118 0 chr17 4742132 4742293 -84762260 + MIR SINE MIR 57 236 -26 666 277 43 77 chr17 4742329 4742510 -84762043 + L2 LINE L2 3021 3190 -123 2070 108 0 29 chr17 4742510 4742816 -84761737 + AluSx SINE Alu 1 297 -15 666 277 43 77 chr17 4742816 4742934 -84761619 + L2 LINE L2 3190 3310 -3 2269 99 0 6 chr17 4744209 4744523 -84760030 + AluSx SINE Alu 1 312 0 681 224 105 53 chr17 4744651 4744879 -84759674 - MIR SINE MIR 0 262 23 2318 98 7 0 chr17 4745010 4745316 -84759237 - AluSx SINE Alu -4 308 1 1222 163 26 13 chr17 4745857 4746084 -84758469 - L1MB3 LINE L1 -1 6182 5953 2042 102 3 24 chr17 4746654 4746949 -84757604 - AluSx SINE Alu -15 297 9 827 204 7 0 chr17 4747697 4747849 -84756704 - FRAM SINE Alu -23 153 1 324 0 0 0 chr17 4748246 4748282 -84756271 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 819 152 65 0 chr17 4748282 4748420 -84756133 - AluSq SINE Alu -32 281 135 715 187 16 0 chr17 4748916 4749039 -84755514 + FLAM_C SINE Alu 1 125 -18 180 200 0 0 chr17 4749051 4749091 -84755462 + GA-rich Low_complexity Low_complexity 1 40 0 354 206 109 11 chr17 4749286 4749378 -84755175 + MIR SINE MIR 24 124 -138 2422 52 0 0 chr17 4749389 4749676 -84754877 - AluY SINE Alu -24 287 1 935 96 0 22 chr17 4749679 4749815 -84754738 - AluSq SINE Alu -180 133 1 418 198 62 0 chr17 4749816 4749912 -84754641 + MIR SINE MIR 113 214 -48 2010 64 8 0 chr17 4750444 4750694 -84753859 - AluSp SINE Alu -61 252 1 919 115 0 8 chr17 4750695 4750825 -84753728 - AluSq/x SINE Alu -183 129 1 1973 143 20 0 chr17 4750833 4751133 -84753420 - AluSx SINE Alu -6 306 1 421 93 0 53 chr17 4751133 4751208 -84753345 - MLT2C2 LTR ERVL -393 71 1 554 143 0 0 chr17 4751270 4751361 -84753192 + FLAM_C SINE Alu 51 141 -2 455 142 19 47 chr17 4751368 4751474 -84753079 + L1MDa LINE L1 1 103 -6437 1047 177 21 0 chr17 4751474 4751660 -84752893 + AluSg/x SINE Alu 120 309 -1 1399 173 24 45 chr17 4751680 4751993 -84752560 + MLT2D LTR ERVL 62 369 -45 183 100 0 0 chr17 4751993 4752023 -84752530 + (TG)n Simple_repeat Simple_repeat 2 31 0 1399 173 24 45 chr17 4752023 4752044 -84752509 + MLT2D LTR ERVL 369 389 -25 933 129 58 7 chr17 4752044 4752199 -84752354 - AluJb SINE Alu -36 276 114 1605 173 61 0 chr17 4752236 4752514 -84752039 - AluJb SINE Alu -17 295 1 536 343 29 0 chr17 4752592 4752767 -84751786 - L1M4 LINE L1 -3532 2614 2435 1396 224 94 34 chr17 4752772 4753243 -84751310 - MLT1D LTR MaLR -4 488 1 225 304 43 0 chr17 4753246 4753407 -84751146 - L1M4 LINE L1 -3708 2438 2271 2057 95 41 10 chr17 4753411 4753706 -84750847 - AluSq SINE Alu -7 306 3 26 50 0 0 chr17 4753974 4754014 -84750539 + GC_rich Low_complexity Low_complexity 1 40 0 2223 76 0 7 chr17 4758532 4758820 -84745733 - AluSc SINE Alu -23 286 1 969 159 0 69 chr17 4758836 4759025 -84745528 - FRAM SINE Alu 0 176 1 397 231 58 70 chr17 4759027 4759183 -84745370 - MER5A DNA MER1_type 0 189 36 1707 166 3 3 chr17 4759603 4759892 -84744661 - AluJb SINE Alu -23 289 1 2255 105 0 0 chr17 4759897 4760202 -84744351 - AluSx SINE Alu -7 305 1 337 313 43 0 chr17 4760208 4760371 -84744182 - L1ME4a LINE L1 -2 6119 5950 237 257 0 59 chr17 4761243 4761395 -84743158 + G-rich Low_complexity Low_complexity 5 147 0 483 323 127 26 chr17 4763140 4763168 -84741385 + L2 LINE L2 1685 1709 -1605 2226 71 17 14 chr17 4763168 4763463 -84741090 + AluSp SINE Alu 1 296 -17 483 323 127 26 chr17 4763463 4763861 -84740692 + L2 LINE L2 1709 2154 -1160 1058 106 0 0 chr17 4763864 4764005 -84740548 - AluSq/x SINE Alu -170 142 2 841 291 21 21 chr17 4764006 4764295 -84740258 + L2 LINE L2 2152 2440 -874 455 308 44 60 chr17 4764607 4764640 -84739913 + L2 LINE L2 2550 2582 -690 1650 99 0 4 chr17 4764640 4764873 -84739680 - AluSg/x SINE Alu 0 312 81 1564 157 7 18 chr17 4764875 4765149 -84739404 - AluJo SINE Alu -41 271 1 455 308 44 60 chr17 4765149 4765304 -84739249 + L2 LINE L2 2583 2739 -533 1956 127 3 7 chr17 4765304 4765604 -84738949 + AluSq SINE Alu 1 299 -14 455 308 44 60 chr17 4765604 4765871 -84738682 + L2 LINE L2 2739 3076 -196 1185 124 119 0 chr17 4766194 4766396 -84738157 - AluSc SINE Alu -13 296 71 1941 117 4 0 chr17 4766397 4766670 -84737883 - AluSp SINE Alu -39 274 1 411 209 0 0 chr17 4766846 4766913 -84737640 + AluJb SINE Alu 200 266 -46 2307 95 3 0 chr17 4766925 4767231 -84737322 - AluSx SINE Alu -5 307 1 2248 106 3 0 chr17 4767559 4767870 -84736683 - AluSx SINE Alu 0 312 1 188 143 24 0 chr17 4768026 4768068 -84736485 + CT-rich Low_complexity Low_complexity 5 47 0 670 91 0 0 chr17 4768510 4768598 -84735955 - AluS SINE Alu -225 88 1 839 183 0 0 chr17 4768621 4768763 -84735790 - FLAM_C SINE Alu -1 142 1 982 154 5 53 chr17 4768777 4768965 -84735588 - AluSg/x SINE Alu 0 312 134 2517 44 0 0 chr17 4768965 4769263 -84735290 - AluY SINE Alu -9 302 5 260 207 52 60 chr17 4769524 4769640 -84734913 - MLT1K LTR MaLR -286 302 188 2219 94 0 0 chr17 4769762 4770050 -84734503 + AluSx SINE Alu 14 301 -11 1943 141 13 3 chr17 4770619 4770918 -84733635 - AluSx SINE Alu -10 302 1 1627 171 3 27 chr17 4770940 4771103 -84733450 - AluJb SINE Alu -20 292 138 2293 86 3 7 chr17 4771103 4771115 -84733438 - AluSp SINE Alu -12 301 290 189 74 0 0 chr17 4771115 4771142 -84733411 + (TA)n Simple_repeat Simple_repeat 1 27 0 2293 86 3 7 chr17 4771142 4771431 -84733122 - AluSp SINE Alu -23 290 1 1627 171 3 27 chr17 4771431 4771566 -84732987 - AluJb SINE Alu -174 138 1 238 53 0 0 chr17 4771678 4771716 -84732837 + Alu SINE Alu 258 295 -8 1284 96 6 6 chr17 4771775 4771952 -84732601 - AluSq SINE Alu -136 177 1 2252 95 0 0 chr17 4773695 4773991 -84730562 - AluY SINE Alu -15 296 1 2202 91 0 7 chr17 4773991 4774287 -84730266 - AluSc SINE Alu -15 294 1 2191 104 0 3 chr17 4775269 4775568 -84728985 - AluSx SINE Alu -14 298 1 344 268 39 4 chr17 4776368 4776604 -84727949 + (TCCA)n Simple_repeat Simple_repeat 1 244 0 336 303 100 65 chr17 4777483 4777803 -84726750 + L1ME LINE L1 5255 5440 -722 2053 122 3 0 chr17 4777803 4778090 -84726463 - AluSx SINE Alu -24 288 1 336 303 100 65 chr17 4778090 4778247 -84726306 + L1ME LINE L1 5440 5590 -572 2102 128 0 0 chr17 4778358 4778642 -84725911 + AluSx SINE Alu 1 287 -25 195 69 0 0 chr17 4778642 4778671 -84725882 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 2102 128 0 0 chr17 4778671 4778683 -84725870 + AluSx SINE Alu 286 297 -15 675 256 0 55 chr17 4778876 4779075 -84725478 - L1ME2 LINE L1 -52 6112 5925 2183 120 0 0 chr17 4779075 4779384 -84725169 + AluSc SINE Alu 1 309 0 1199 111 0 0 chr17 4779384 4779546 -84725007 + AluSq SINE Alu 134 295 -18 1414 170 33 33 chr17 4779553 4779853 -84724700 + AluJb SINE Alu 1 300 -12 188 301 193 42 chr17 4779897 4780090 -84724463 + L2 LINE L2 3026 3255 -17 2115 62 87 3 chr17 4780090 4780379 -84724174 + AluSq SINE Alu 1 313 0 188 301 193 42 chr17 4780379 4780398 -84724155 + L2 LINE L2 3255 3270 -2 2255 99 0 0 chr17 4781002 4781305 -84723248 - AluSq SINE Alu -10 303 1 1731 157 48 0 chr17 4782674 4782968 -84721585 + AluJo SINE Alu 1 308 -4 23 0 0 0 chr17 4784106 4784129 -84720424 + GC_rich Low_complexity Low_complexity 1 23 0 36 77 0 0 chr17 4784515 4784593 -84719960 + GC_rich Low_complexity Low_complexity 1 78 0 21 57 0 0 chr17 4784623 4784658 -84719895 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr17 4784840 4784893 -84719660 + GC_rich Low_complexity Low_complexity 1 53 0 373 308 117 0 chr17 4785058 4785178 -84719375 - L2 LINE L2 -1 3312 3179 1213 223 72 5 chr17 4785231 4785649 -84718904 - L1ME2 LINE L1 -393 5771 5326 1326 117 187 44 chr17 4785651 4785696 -84718857 - AluJb SINE Alu 0 312 275 2420 60 0 7 chr17 4785696 4785998 -84718555 - AluY SINE Alu -11 300 1 1326 117 187 44 chr17 4785998 4786225 -84718328 - AluJb SINE Alu -37 275 1 2153 70 35 3 chr17 4786234 4786519 -84718034 - AluSp SINE Alu -19 294 1 844 220 9 51 chr17 4786520 4786778 -84717775 + L1ME2 LINE L1 5926 6334 0 1948 104 56 3 chr17 4786784 4787072 -84717481 + AluSc SINE Alu 1 303 -6 2432 77 0 0 chr17 4787164 4787475 -84717078 + AluY SINE Alu 1 311 0 2001 135 0 0 chr17 4787646 4787942 -84716611 + AluSx SINE Alu 1 296 -16 2468 65 0 7 chr17 4787942 4788251 -84716302 + AluY SINE Alu 1 307 -4 434 250 11 107 chr17 4788293 4788449 -84716104 + MIR SINE MIR 34 162 -100 2149 102 3 7 chr17 4788449 4788744 -84715809 + AluSx SINE Alu 1 294 -18 434 250 11 107 chr17 4788744 4788821 -84715732 + MIR SINE MIR 162 245 -17 824 202 5 58 chr17 4789562 4789639 -84714914 - MER45A DNA AcHobo -1403 178 98 2231 82 10 0 chr17 4789639 4789932 -84714621 + AluY SINE Alu 1 296 -15 824 202 5 58 chr17 4789932 4790042 -84714511 - MER45A DNA AcHobo -1483 98 1 720 298 57 32 chr17 4790768 4791083 -84713470 - L2 LINE L2 -17 3296 2974 887 187 22 39 chr17 4791083 4791251 -84713302 + L1MC1 LINE L1 6155 6324 -9 2252 94 0 7 chr17 4791251 4791550 -84713003 + AluSx SINE Alu 1 297 -15 1963 103 4 0 chr17 4791550 4791813 -84712740 + AluSp SINE Alu 38 301 -12 887 187 22 39 chr17 4791813 4791825 -84712728 + L1MC1 LINE L1 6322 6333 0 1381 187 37 23 chr17 4791826 4791953 -84712600 + AluJo SINE Alu 1 125 -187 2104 138 0 0 chr17 4791953 4792265 -84712288 + AluSx SINE Alu 1 312 0 1381 187 37 23 chr17 4792265 4792437 -84712116 + AluJo SINE Alu 125 304 -8 2276 93 0 3 chr17 4794335 4794636 -84709917 - AluSx SINE Alu -12 300 1 1927 66 0 4 chr17 4795727 4795970 -84708583 + AluSg SINE Alu 32 273 -37 190 0 0 62 chr17 4795974 4796006 -84708547 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1713 175 13 34 chr17 4796106 4796529 -84708024 - L1M4 LINE L1 -507 5667 5254 792 151 22 29 chr17 4796556 4796695 -84707858 - FRAM SINE Alu -38 138 1 2793 12 0 6 chr17 4796700 4797020 -84707533 - AluYb8 SINE Alu 0 318 1 1801 98 0 8 chr17 4797039 4797284 -84707269 - AluSx SINE Alu -69 243 1 500 193 40 13 chr17 4797285 4797435 -84707118 - L1M4 LINE L1 -838 5308 5155 860 49 0 0 chr17 4797536 4797638 -84706915 - AluS SINE Alu -210 102 1 1842 86 12 4 chr17 4798078 4798335 -84706218 + AluSq SINE Alu 47 305 -8 21 0 0 0 chr17 4798533 4798554 -84705999 + GC_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 4798621 4798649 -84705904 + GC_rich Low_complexity Low_complexity 1 28 0 1617 149 76 4 chr17 4801266 4801541 -84703012 - AluJb SINE Alu -17 295 1 412 267 104 54 chr17 4801616 4801840 -84702713 - MIR3 SINE MIR -6 256 7 627 252 129 31 chr17 4802997 4803291 -84701262 - MER102b DNA MER1_type 0 341 19 240 226 0 0 chr17 4803580 4803642 -84700911 + CT-rich Low_complexity Low_complexity 2 63 0 290 229 9 48 chr17 4806259 4806364 -84698189 + MER113 DNA MER1_type? 4 104 -417 2383 77 0 0 chr17 4806371 4806668 -84697885 - AluSg SINE Alu -13 297 1 361 283 94 11 chr17 4806682 4806893 -84697660 - L1MC5 LINE L1 -12 7927 7545 2195 101 13 7 chr17 4806915 4807222 -84697331 - AluSx SINE Alu -3 309 1 2145 119 0 6 chr17 4808197 4808509 -84696044 - AluY SINE Alu -1 310 1 832 229 28 17 chr17 4808523 4808702 -84695851 + AluJb SINE Alu 131 311 -1 2253 107 10 0 chr17 4808723 4809032 -84695521 + AluSp SINE Alu 1 312 -1 299 128 0 0 chr17 4809474 4809521 -84695032 + AluSp/q SINE Alu 204 250 -53 1087 147 17 60 chr17 4809521 4809753 -84694800 + AluJo SINE Alu 85 306 -6 2301 74 0 0 chr17 4809768 4810051 -84694502 + AluSx SINE Alu 13 295 -17 441 339 23 6 chr17 4810071 4810242 -84694311 - MLT1K LTR MaLR -282 306 133 199 322 17 107 chr17 4810391 4810476 -84694077 - MIR SINE MIR -27 235 144 336 48 0 0 chr17 4810476 4810518 -84694035 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 199 322 17 107 chr17 4810518 4810545 -84694008 - MIR SINE MIR -118 144 116 2127 113 0 0 chr17 4810545 4810852 -84693701 - AluSq SINE Alu 0 309 3 199 322 17 107 chr17 4810852 4810914 -84693639 - MIR SINE MIR -146 116 75 1948 152 3 25 chr17 4812003 4812188 -84692365 - AluJb SINE Alu -4 308 120 2265 100 3 0 chr17 4812188 4812499 -84692054 - AluSx SINE Alu 0 312 1 1948 152 3 25 chr17 4812499 4812529 -84692024 - AluJb SINE Alu -191 121 2 703 133 0 0 chr17 4812529 4812627 -84691926 - AluJ/FLAM SINE Alu -213 99 2 2167 94 30 17 chr17 4813233 4813531 -84691022 + AluSx SINE Alu 5 306 -6 339 318 28 0 chr17 4813626 4813733 -84690820 + L2 LINE L2 3197 3306 -7 619 148 0 19 chr17 4813755 4813863 -84690690 + FRAM SINE Alu 62 167 -9 2422 103 3 0 chr17 4813921 4814231 -84690322 + AluSp SINE Alu 1 311 -2 302 340 139 15 chr17 4814266 4814556 -84689997 - L2 LINE L2 -239 3074 2741 2416 64 0 20 chr17 4814558 4814854 -84689699 - AluY SINE Alu -16 295 6 1885 230 96 45 chr17 4814900 4815157 -84689396 - L1ME3A LINE L1 -5 6165 5923 2163 84 24 14 chr17 4815157 4815444 -84689109 - AluSx SINE Alu -22 290 1 1885 230 96 45 chr17 4815444 4815583 -84688970 - L1ME3A LINE L1 -247 5923 5793 2311 124 0 6 chr17 4815583 4815897 -84688656 - AluSx SINE Alu 0 312 1 1885 230 96 45 chr17 4815897 4816124 -84688429 - L1ME3A LINE L1 -377 5793 5509 311 331 11 67 chr17 4816137 4816213 -84688340 - L2 LINE L2 -613 2701 2622 2281 108 3 0 chr17 4816213 4816518 -84688035 + AluSg SINE Alu 1 306 -4 311 331 11 67 chr17 4816518 4816619 -84687934 - L2 LINE L2 -692 2622 2534 1731 171 3 45 chr17 4816752 4816898 -84687655 + AluJo SINE Alu 1 129 -183 2335 95 3 0 chr17 4816898 4817193 -84687360 + AluSp SINE Alu 1 296 -17 1731 171 3 45 chr17 4817193 4817356 -84687197 + AluJo SINE Alu 129 297 -15 1794 169 28 0 chr17 4817628 4817912 -84686641 + AluJb SINE Alu 1 292 -20 2484 80 0 3 chr17 4818071 4818370 -84686183 + AluSc SINE Alu 1 298 -11 1729 182 30 0 chr17 4818451 4818748 -84685805 + AluJo SINE Alu 1 306 -6 2364 103 3 0 chr17 4819349 4819650 -84684903 - AluSp SINE Alu -11 302 1 249 300 56 0 chr17 4819685 4819775 -84684778 - MIR SINE MIR -70 192 98 824 164 7 26 chr17 4820193 4820328 -84684225 + AluJo SINE Alu 1 134 -178 1437 150 49 95 chr17 4820328 4820654 -84683899 + AluSq SINE Alu 1 311 -2 824 164 7 26 chr17 4820654 4820670 -84683883 + AluJo SINE Alu 134 149 -163 2489 65 0 3 chr17 4820821 4821113 -84683440 - AluSc SINE Alu -18 291 1 438 293 5 34 chr17 4821115 4821323 -84683230 - L1MC5 LINE L1 -429 7532 7331 246 316 187 50 chr17 4821337 4821456 -84683097 + L2 LINE L2 2809 2910 -362 2393 105 0 0 chr17 4821456 4821761 -84682792 - AluSq SINE Alu -8 305 1 246 316 187 50 chr17 4821761 4822043 -84682510 + L2 LINE L2 2910 3265 -7 277 330 80 18 chr17 4822372 4822484 -84682069 - L2 LINE L2 -4 3309 3191 734 252 89 43 chr17 4822486 4822596 -84681957 + MER58B DNA MER1_type 1 104 -2316 2396 55 0 21 chr17 4822596 4822885 -84681668 + AluY SINE Alu 17 299 -12 734 252 89 43 chr17 4822885 4823099 -84681454 + MER58B DNA MER1_type 104 340 -1 560 222 73 43 chr17 4823113 4823347 -84681206 - MER112 DNA MER1_type -12 248 8 678 139 47 47 chr17 4823347 4823476 -84681077 + FLAM_C SINE Alu 1 129 -4 348 259 9 19 chr17 4823590 4823698 -84680855 - L2 LINE L2 -196 3076 2970 2437 100 0 0 chr17 4823701 4824002 -84680551 + AluSg1 SINE Alu 2 302 -7 1400 102 5 0 chr17 4824303 4824490 -84680063 - AluSp SINE Alu -5 308 121 350 54 0 54 chr17 4824498 4824572 -84679981 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 1310 70 0 41 chr17 4824573 4824744 -84679809 - AluY SINE Alu -147 164 1 706 159 0 23 chr17 4824747 4824879 -84679674 - AluJo/FLAM SINE Alu -173 129 1 722 246 28 9 chr17 4824879 4825094 -84679459 - L1M4 LINE L1 -3371 2775 2557 711 259 118 4 chr17 4825242 4825470 -84679083 - MIR SINE MIR -3 259 6 2281 125 0 0 chr17 4825566 4825878 -84678675 - AluSx SINE Alu 0 312 1 1844 165 3 3 chr17 4825890 4826175 -84678378 - AluJb SINE Alu -27 285 1 2412 92 0 10 chr17 4826365 4826668 -84677885 + AluSx SINE Alu 2 301 -11 347 285 57 83 chr17 4826685 4826913 -84677640 + MIR SINE MIR 39 260 -2 1383 292 58 64 chr17 4827043 4827462 -84677091 + L2 LINE L2 107 527 -2787 2387 69 41 72 chr17 4827462 4827881 -84676672 - L1MA2 LINE L1 0 6304 5899 2183 117 3 13 chr17 4827881 4828190 -84676363 - AluSx SINE Alu -1 311 6 1383 292 58 64 chr17 4828190 4828690 -84675863 + L2 LINE L2 525 1021 -2293 1363 114 0 0 chr17 4828721 4828897 -84675656 - AluSx SINE Alu -136 176 1 194 363 22 22 chr17 4828911 4829002 -84675551 + L2 LINE L2 3222 3312 -1 1376 113 11 0 chr17 4829075 4829260 -84675293 + AluSp SINE Alu 1 187 -126 1937 137 7 7 chr17 4829362 4829654 -84674899 - AluSx SINE Alu -20 292 1 2167 91 63 0 chr17 4829931 4830217 -84674336 - AluSx SINE Alu -7 305 2 384 288 109 42 chr17 4831177 4831304 -84673249 - L2 LINE L2 -58 3255 3138 1835 139 49 7 chr17 4831304 4831591 -84672962 - AluJb SINE Alu -13 299 1 384 288 109 42 chr17 4831591 4831776 -84672777 - L2 LINE L2 -175 3138 2922 2085 136 7 3 chr17 4831893 4832195 -84672358 - AluJb SINE Alu -9 303 1 2034 143 17 0 chr17 4832312 4832605 -84671948 + AluSx SINE Alu 7 304 -8 2307 45 7 41 chr17 4832783 4833110 -84671443 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 4834144 4834170 -84670383 + (CAG)n Simple_repeat Simple_repeat 3 28 0 563 267 53 16 chr17 4834388 4834575 -84669978 - MIR SINE MIR -3 259 66 2269 78 0 19 chr17 4834875 4835182 -84669371 - AluSc SINE Alu -8 301 1 2115 86 52 0 chr17 4835362 4835663 -84668890 - AluSx SINE Alu 0 315 1 245 347 116 0 chr17 4835730 4835851 -84668702 - L2 LINE L2 -1 3271 3137 224 247 340 0 chr17 4835859 4835956 -84668597 + L2 LINE L2 3141 3270 -2 1140 93 0 0 chr17 4836107 4836246 -84668307 + AluSg SINE Alu 1 139 -171 365 75 0 0 chr17 4836251 4836304 -84668249 + Alu SINE Alu 249 301 0 370 243 103 26 chr17 4836382 4836555 -84667998 - MIR SINE MIR -10 252 63 865 254 79 63 chr17 4838614 4838896 -84665657 + L2 LINE L2 2211 2504 -810 2477 93 0 0 chr17 4838896 4839208 -84665345 - AluSp SINE Alu -1 312 1 865 254 79 63 chr17 4839208 4839382 -84665171 + L2 LINE L2 2504 2674 -640 2344 107 0 13 chr17 4839423 4839740 -84664813 - AluSq SINE Alu 0 313 1 334 219 109 0 chr17 4839749 4839877 -84664676 - L1M4 LINE L1 -2191 3955 3814 1428 97 11 0 chr17 4839877 4840063 -84664490 - AluSg/x SINE Alu -13 297 110 651 269 46 102 chr17 4840215 4840625 -84663928 - MLT1K LTR MaLR -26 562 176 1319 48 6 0 chr17 4840625 4840791 -84663762 - THE1C LTR MaLR 0 375 209 1178 67 0 0 chr17 4841091 4841226 -84663327 + AluSq/x SINE Alu 1 135 -178 2226 107 7 13 chr17 4841226 4841534 -84663019 + AluSx SINE Alu 1 306 -6 2015 127 8 33 chr17 4841754 4841879 -84662674 - L1PA16 LINE L1 -9 6157 6030 2474 95 0 0 chr17 4841879 4842184 -84662369 - AluSx SINE Alu -7 305 1 2015 127 8 33 chr17 4842184 4842419 -84662134 - L1PA16 LINE L1 -136 6030 5806 421 270 75 70 chr17 4842456 4842622 -84661931 + MLT1J LTR MaLR 234 398 -113 189 0 0 0 chr17 4842622 4842643 -84661910 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2231 92 0 7 chr17 4842645 4842929 -84661624 - AluSx SINE Alu -29 283 2 421 270 75 70 chr17 4842929 4843000 -84661553 + MLT1J LTR MaLR 398 475 -36 2284 105 23 3 chr17 4843173 4843479 -84661074 - AluSx SINE Alu 0 312 1 723 237 121 22 chr17 4843497 4843508 -84661045 + HsTC2 DNA Tc2 2 11 -1887 1671 117 121 23 chr17 4843508 4843772 -84660781 - AluSg SINE Alu -20 290 1 723 237 121 22 chr17 4843772 4843984 -84660569 + HsTC2 DNA Tc2 11 247 -1651 1492 214 21 8 chr17 4843990 4844369 -84660184 + L1M4 LINE L1 4375 4758 -1388 962 168 114 111 chr17 4844370 4844689 -84659864 + AluJo SINE Alu 1 320 0 2275 97 13 13 chr17 4844698 4845007 -84659546 + AluSp SINE Alu 2 310 -3 1939 138 22 28 chr17 4845012 4845374 -84659179 + L1MC1 LINE L1 5918 6277 -56 1029 113 0 0 chr17 4845374 4845507 -84659046 + AluSq/x SINE Alu 1 133 -179 222 118 0 0 chr17 4845507 4845541 -84659012 + (A)n Simple_repeat Simple_repeat 1 34 0 452 73 0 15 chr17 4845541 4845609 -84658944 + L1MC1 LINE L1 6261 6327 -6 2100 118 0 10 chr17 4845610 4845938 -84658615 + AluSx SINE Alu 1 312 0 571 209 201 14 chr17 4846067 4846352 -84658201 + HsTC2 DNA Tc2 1296 1811 -87 2113 131 0 0 chr17 4846352 4846662 -84657891 + AluSx SINE Alu 1 310 0 230 306 113 48 chr17 4846709 4846938 -84657615 - L2 LINE L2 -23 3290 3047 493 100 0 0 chr17 4847059 4847129 -84657424 + AluS SINE Alu 2 71 -242 273 57 0 0 chr17 4847623 4847658 -84656895 + (A)n Simple_repeat Simple_repeat 1 35 0 313 250 31 102 chr17 4847811 4847939 -84656614 - L2 LINE L2 -6 3307 3189 2031 102 11 0 chr17 4848076 4848341 -84656212 + AluSq SINE Alu 1 268 -45 351 281 10 97 chr17 4848530 4848726 -84655827 - MIR SINE MIR -59 203 25 1715 148 129 44 chr17 4848840 4849106 -84655447 + MER39 LTR ERV1 1 243 -464 2338 88 14 0 chr17 4849106 4849400 -84655153 - AluSp SINE Alu -15 298 1 1715 148 129 44 chr17 4849400 4849620 -84654933 + MER39 LTR ERV1 243 707 0 236 200 0 0 chr17 4850390 4850435 -84654118 - L2 LINE L2 -2 3311 3267 637 188 39 0 chr17 4850694 4850822 -84653731 - FLAM_C SINE Alu 0 133 1 2181 90 11 4 chr17 4850957 4851264 -84653289 - AluSg SINE Alu 0 309 1 186 191 0 0 chr17 4851587 4851629 -84652924 + (TTA)n Simple_repeat Simple_repeat 1 42 0 347 273 167 0 chr17 4852221 4852353 -84652200 + MIR SINE MIR 47 200 -62 1600 120 4 21 chr17 4852579 4852758 -84651795 - AluSq SINE Alu -1 312 137 2378 79 10 0 chr17 4852758 4853050 -84651503 - AluSx SINE Alu -17 295 1 1600 120 4 21 chr17 4853050 4853112 -84651441 - AluSq SINE Alu -176 137 75 2015 101 18 0 chr17 4854005 4854281 -84650272 - AluSx SINE Alu -17 295 15 266 319 121 28 chr17 4854334 4854582 -84649971 - L2 LINE L2 -354 2960 2690 1252 171 20 33 chr17 4854703 4854948 -84649605 - AluJo SINE Alu -70 242 1 798 328 85 32 chr17 4854970 4855467 -84649086 - L2 LINE L2 -1081 2233 1689 2185 108 0 20 chr17 4855467 4855772 -84648781 + AluSg SINE Alu 11 309 -1 798 328 85 32 chr17 4855772 4855954 -84648599 - L2 LINE L2 -1625 1689 1518 241 130 0 0 chr17 4856018 4856064 -84648489 + MADE1 DNA Mariner 1 46 -34 197 291 182 7 chr17 4856073 4856221 -84648332 - L2 LINE L2 -1897 1417 1244 330 146 0 0 chr17 4856534 4856582 -84647971 + AluSg/x SINE Alu 218 265 -37 548 212 78 60 chr17 4856682 4856899 -84647654 + L1MC4 LINE L1 5639 5859 -1949 979 248 125 21 chr17 4856899 4857400 -84647153 + L2 LINE L2 2509 3072 -241 288 0 0 0 chr17 4857400 4857432 -84647121 + (CA)n Simple_repeat Simple_repeat 1 32 0 1984 112 36 7 chr17 4857523 4857800 -84646753 + AluSg SINE Alu 1 285 -25 379 260 77 65 chr17 4857863 4858032 -84646521 + L2 LINE L2 3103 3273 -40 273 267 61 53 chr17 4858037 4858168 -84646385 + L1MD2 LINE L1 6198 6329 -30 366 333 0 0 chr17 4858176 4858266 -84646287 + L1MC4 LINE L1 6614 6703 -1339 339 298 48 0 chr17 4858224 4858308 -84646245 - L1MC4 LINE L1 -1339 6703 6616 * 1117 215 5 10 chr17 4858411 4858616 -84645937 - AluJo SINE Alu -108 204 1 1360 263 198 35 chr17 4858643 4858985 -84645568 + HAL1 LINE L1 126 411 -2096 1959 71 108 8 chr17 4858985 4859253 -84645300 + AluSx SINE Alu 1 295 -17 1360 263 198 35 chr17 4859253 4859275 -84645278 + HAL1 LINE L1 411 428 -2079 1554 170 99 7 chr17 4859275 4859558 -84644995 + AluJb SINE Alu 1 309 -3 1360 263 198 35 chr17 4859558 4859792 -84644761 + HAL1 LINE L1 428 823 -1684 1138 168 0 0 chr17 4859792 4859965 -84644588 - FRAM SINE Alu -6 170 1 287 247 35 0 chr17 4859968 4860053 -84644500 + HAL1 LINE L1 817 904 -1603 572 138 0 0 chr17 4860131 4860218 -84644335 + AluS SINE Alu 2 88 -225 2355 116 0 0 chr17 4860533 4860844 -84643709 + AluSx SINE Alu 1 311 -1 308 192 39 0 chr17 4860844 4860922 -84643631 + HAL1 LINE L1 2304 2384 -123 1035 150 63 77 chr17 4860931 4860980 -84643573 + AluJb SINE Alu 87 135 -177 2335 109 0 6 chr17 4860980 4861293 -84643260 + AluSx SINE Alu 1 311 -1 1035 150 63 77 chr17 4861293 4861450 -84643103 + AluJb SINE Alu 135 290 -22 396 203 144 25 chr17 4861455 4861573 -84642980 + HAL1 LINE L1 2376 2507 0 2240 119 7 0 chr17 4861601 4861927 -84642626 + AluSq SINE Alu 1 313 0 2429 99 0 0 chr17 4862321 4862623 -84641930 + AluSq SINE Alu 1 302 -11 2194 102 0 7 chr17 4862790 4863084 -84641469 + AluSx SINE Alu 1 292 -20 309 141 0 0 chr17 4863260 4863282 -84641271 + (A)n Simple_repeat Simple_repeat 1 22 -42 2412 72 10 0 chr17 4863282 4863574 -84640979 - AluSp SINE Alu -20 293 1 309 141 0 0 chr17 4863574 4863586 -84640967 + (A)n Simple_repeat Simple_repeat 22 33 -31 217 0 0 0 chr17 4863592 4863616 -84640937 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2121 98 40 0 chr17 4863616 4863887 -84640666 - AluSq SINE Alu -9 304 1 309 141 0 0 chr17 4863887 4863902 -84640651 + (A)n Simple_repeat Simple_repeat 33 47 -17 2412 49 7 3 chr17 4863902 4864206 -84640347 - AluY SINE Alu -6 305 1 309 141 0 0 chr17 4864206 4864218 -84640335 + (A)n Simple_repeat Simple_repeat 46 64 0 2425 62 7 0 chr17 4864226 4864532 -84640021 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 4864602 4864631 -84639922 + AT_rich Low_complexity Low_complexity 1 29 0 1399 160 4 4 chr17 4864713 4864951 -84639602 - AluJb SINE Alu 0 312 75 22 0 0 0 chr17 4865115 4865137 -84639416 + AT_rich Low_complexity Low_complexity 1 22 0 267 295 67 9 chr17 4865308 4865413 -84639140 - L3 LINE CR1 -1310 267 157 283 316 62 37 chr17 4865510 4865754 -84638799 + L1MC4 LINE L1 7689 7938 -104 188 206 0 0 chr17 4865939 4865973 -84638580 + L2 LINE L2 3016 3049 -264 2067 120 10 0 chr17 4866192 4866492 -84638061 + AluSg SINE Alu 1 303 -7 593 154 0 77 chr17 4867872 4868067 -84636486 + CT-rich Low_complexity Low_complexity 1 180 0 278 254 213 25 chr17 4869510 4869632 -84634921 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 4869632 4869654 -84634899 + AT_rich Low_complexity Low_complexity 1 22 0 1149 209 60 38 chr17 4873080 4873396 -84631157 + Charlie4a DNA MER1_type 1 323 -185 1659 139 63 21 chr17 4873396 4873683 -84630870 + AluJb SINE Alu 1 299 -13 2251 95 0 3 chr17 4873683 4873979 -84630574 + AluSg SINE Alu 1 295 -15 838 171 29 0 chr17 4874223 4874363 -84630190 + FRAM SINE Alu 9 152 -24 1390 156 5 9 chr17 4874919 4875143 -84629410 - AluSg/x SINE Alu -18 292 70 279 324 54 0 chr17 4875808 4875919 -84628634 - MER117 DNA MER1_type -55 142 26 356 346 64 16 chr17 4875920 4876108 -84628445 + MIR SINE MIR 60 256 -6 2038 127 3 3 chr17 4876165 4876464 -84628089 - AluSx SINE Alu -13 299 1 1719 107 19 91 chr17 4877086 4877405 -84627148 + AluSx SINE Alu 1 296 -16 2205 110 0 0 chr17 4877406 4877707 -84626846 + AluSc SINE Alu 1 301 -8 21 0 0 0 chr17 4877729 4877750 -84626803 + AT_rich Low_complexity Low_complexity 1 21 0 1854 151 14 0 chr17 4877768 4878059 -84626494 + AluJb SINE Alu 1 295 -17 2514 50 3 0 chr17 4879103 4879405 -84625148 - AluY SINE Alu -8 303 1 1959 153 3 0 chr17 4879408 4879716 -84624837 - AluSx SINE Alu -3 309 1 445 101 0 2 chr17 4879911 4880169 -84624384 + AluY SINE Alu 2 304 -7 366 181 64 0 chr17 4880185 4880278 -84624275 + MER58 DNA MER1_type 1 109 -232 386 292 106 0 chr17 4880356 4880469 -84624084 + L2 LINE L2 3148 3272 0 5920 201 21 15 chr17 4880495 4880700 -84623853 + L1MB8 LINE L1 3974 4176 -1970 2008 143 0 3 chr17 4880700 4881014 -84623539 + AluSq SINE Alu 1 313 0 5920 201 21 15 chr17 4881014 4882214 -84622339 + L1MB8 LINE L1 4176 5388 -758 2977 145 12 79 chr17 4882219 4882393 -84622160 + L1PB3 LINE L1 5611 5795 -359 2045 97 4 4 chr17 4882393 4882671 -84621882 + AluSg SINE Alu 1 278 -32 2977 145 12 79 chr17 4882671 4883077 -84621476 + L1PB3 LINE L1 5795 6152 -2 2058 127 0 0 chr17 4883087 4883378 -84621175 + AluSx SINE Alu 1 291 -21 2519 50 0 0 chr17 4884833 4885132 -84619421 + AluY SINE Alu 1 299 -12 392 247 17 98 chr17 4885178 4885375 -84619178 - L2 LINE L2 -107 3206 3029 2286 88 0 0 chr17 4885375 4885671 -84618882 + AluSq SINE Alu 1 296 -17 392 247 17 98 chr17 4885671 4885708 -84618845 - L2 LINE L2 -284 3029 2991 1310 170 87 7 chr17 4885712 4885971 -84618582 + L1MB8 LINE L1 5518 5804 -380 3050 163 20 38 chr17 4885971 4886531 -84618022 - MER44D DNA MER2_type 0 605 1 1310 170 87 7 chr17 4886531 4886559 -84617994 + L1MB8 LINE L1 5804 5828 -356 553 206 76 30 chr17 4886563 4886694 -84617859 + FLAM_A SINE Alu 1 137 -5 1243 182 16 55 chr17 4886710 4887017 -84617536 + L1MB8 LINE L1 5845 6139 -39 1908 117 0 28 chr17 4887017 4887337 -84617216 + AluSx SINE Alu 1 312 0 1778 86 0 163 chr17 4887338 4887688 -84616865 + AluSg SINE Alu 1 293 -17 2174 96 0 3 chr17 4887688 4887989 -84616564 + AluSg SINE Alu 1 300 -10 405 125 0 0 chr17 4888095 4888151 -84616402 - AluS SINE Alu -246 63 8 2531 292 65 43 chr17 4888205 4888240 -84616313 - L2 LINE L2 -342 2972 2939 1503 181 10 16 chr17 4888240 4888544 -84616009 + AluJo SINE Alu 1 302 -10 2531 292 65 43 chr17 4888544 4889423 -84615130 - L2 LINE L2 -375 2939 2029 1652 186 6 6 chr17 4889423 4889734 -84614819 + AluJo SINE Alu 1 311 -1 2531 292 65 43 chr17 4889734 4889886 -84614667 - L2 LINE L2 -1285 2029 1882 1598 196 113 100 chr17 4889961 4890204 -84614349 + L1MC4 LINE L1 7177 7415 -627 765 124 7 103 chr17 4890204 4890349 -84614204 - FLAM_C SINE Alu 0 133 3 1598 196 113 100 chr17 4890349 4890551 -84614002 + L1MC4 LINE L1 7415 7613 -429 1790 126 35 29 chr17 4890551 4890861 -84613692 + AluSx SINE Alu 1 312 0 1598 196 113 100 chr17 4890861 4890919 -84613634 + L1MC4 LINE L1 7613 7669 -373 198 0 0 0 chr17 4890919 4890941 -84613612 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1598 196 113 100 chr17 4890941 4891063 -84613490 + L1MC4 LINE L1 7669 7812 -230 695 81 11 0 chr17 4891163 4891250 -84613303 + AluSq SINE Alu 101 188 -125 1663 149 25 38 chr17 4891343 4891658 -84612895 + AluJb SINE Alu 1 311 -1 207 0 0 0 chr17 4891693 4891716 -84612837 + (A)n Simple_repeat Simple_repeat 1 23 0 466 299 13 32 chr17 4892105 4892259 -84612294 - L2 LINE L2 -567 2747 2597 326 278 87 24 chr17 4892389 4892515 -84612038 + L2 LINE L2 3175 3308 -5 1835 169 0 0 chr17 4892837 4893133 -84611420 + AluJb SINE Alu 1 296 -16 293 330 60 32 chr17 4893603 4893788 -84610765 - L2 LINE L2 -713 2601 2412 * 322 310 87 45 chr17 4893768 4894092 -84610461 + L2 LINE L2 2746 3077 -195 305 221 13 39 chr17 4894137 4894214 -84610339 + L2 LINE L2 3195 3269 -3 2279 61 3 10 chr17 4895169 4895465 -84609088 - AluSx SINE Alu -18 294 1 2140 93 17 0 chr17 4896458 4896748 -84607805 - AluSx SINE Alu -17 295 1 834 370 58 40 chr17 4896751 4897563 -84606990 + L2 LINE L2 2474 3298 -15 793 196 14 0 chr17 4897564 4897707 -84606846 - AluJb SINE Alu -52 260 116 2246 86 3 3 chr17 4897708 4898011 -84606542 - AluY SINE Alu -8 303 1 1456 129 177 12 chr17 4898013 4898261 -84606292 - AluSg SINE Alu -11 289 1 355 190 76 0 chr17 4898539 4898618 -84605935 + AluSg/x SINE Alu 170 254 -48 6381 136 238 19 chr17 4898629 4899969 -84604584 - pTR5 LTR ERV1 -21 2417 785 530 124 19 38 chr17 4899969 4900074 -84604479 + FRAM SINE Alu 74 176 0 200 296 163 10 chr17 4900224 4900322 -84604231 + L2 LINE L2 3173 3285 -28 241 247 34 22 chr17 4900322 4900411 -84604142 + (TGGA)n Simple_repeat Simple_repeat 2 91 0 583 238 73 6 chr17 4903209 4903373 -84601180 + MIR SINE MIR 1 175 -87 542 101 0 0 chr17 4903373 4903479 -84601074 - AluSg/x SINE Alu 0 319 214 2204 85 0 24 chr17 4903481 4903619 -84600934 + AluSx SINE Alu 1 141 -161 1939 141 0 19 chr17 4903619 4903757 -84600796 + AluSx SINE Alu 1 140 -172 2298 69 3 0 chr17 4903757 4904047 -84600506 + AluY SINE Alu 1 291 -20 1939 141 0 19 chr17 4904047 4904220 -84600333 + AluSx SINE Alu 140 306 -6 2204 85 0 24 chr17 4904220 4904376 -84600177 + AluSx SINE Alu 141 288 -14 252 293 13 0 chr17 4904378 4904453 -84600100 + MIR SINE MIR 179 254 -8 357 62 0 0 chr17 4905877 4905925 -84598628 + (CA)n Simple_repeat Simple_repeat 2 49 0 309 100 0 0 chr17 4905961 4906011 -84598542 + (CA)n Simple_repeat Simple_repeat 2 51 0 186 191 0 0 chr17 4906041 4906083 -84598470 + (CA)n Simple_repeat Simple_repeat 2 43 0 363 23 0 0 chr17 4906101 4906145 -84598408 + (CA)n Simple_repeat Simple_repeat 2 45 0 208 150 25 0 chr17 4907045 4907085 -84597468 + (CTGGGG)n Simple_repeat Simple_repeat 6 46 0 2104 121 3 0 chr17 4907242 4907539 -84597014 - AluSx SINE Alu -13 299 2 1985 113 28 3 chr17 4909189 4909480 -84595073 - AluSq SINE Alu -15 298 1 262 302 239 16 chr17 4909884 4910202 -84594351 - L2 LINE L2 -46 3267 2879 200 261 134 0 chr17 4910346 4910465 -84594088 - L2 LINE L2 -457 2857 2723 181 195 73 0 chr17 4912086 4912127 -84592426 + L2 LINE L2 3226 3269 -3 210 37 0 0 chr17 4912755 4912782 -84591771 + (CAA)n Simple_repeat Simple_repeat 3 29 0 2261 90 0 0 chr17 4912797 4913098 -84591455 - AluSx SINE Alu -11 301 1 316 346 108 0 chr17 4913163 4913377 -84591176 - L2 LINE L2 -230 3083 2847 21 0 0 0 chr17 4913651 4913672 -84590881 + AT_rich Low_complexity Low_complexity 1 21 0 359 270 36 0 chr17 5114749 5114860 -84389693 + L1MC/D LINE L1 5486 5600 -744 2312 109 3 0 chr17 5115023 5115334 -84389219 + AluSq SINE Alu 1 312 -1 378 0 0 0 chr17 5115834 5115876 -84388677 + (CA)n Simple_repeat Simple_repeat 2 43 0 1822 129 29 0 chr17 5115902 5116180 -84388373 + AluJo SINE Alu 1 286 -26 246 192 27 41 chr17 5116358 5116431 -84388122 + C-rich Low_complexity Low_complexity 1 72 0 28 0 0 0 chr17 5116525 5116553 -84388000 + GC_rich Low_complexity Low_complexity 1 28 0 5683 52 8 0 chr17 5117125 5117783 -84386770 + LTR5 LTR ERVK 1 663 -306 2250 98 7 13 chr17 5117921 5118227 -84386326 - AluSx SINE Alu -8 304 1 501 278 124 0 chr17 5118301 5118470 -84386083 + MIR SINE MIR 71 260 -2 2155 110 0 0 chr17 5118501 5118782 -84385771 + AluSg SINE Alu 11 291 -19 2254 71 0 17 chr17 5118986 5119283 -84385270 + AluY SINE Alu 1 292 -19 184 343 27 0 chr17 5119747 5119820 -84384733 + L2 LINE L2 2884 2958 -356 2408 81 3 3 chr17 5119838 5120146 -84384407 - AluSp SINE Alu -5 308 1 2225 82 13 16 chr17 5120152 5120455 -84384098 - AluSq SINE Alu -11 302 1 1000 181 12 0 chr17 5121069 5121235 -84383318 + AluSg/x SINE Alu 138 305 -7 2038 121 3 36 chr17 5121388 5121721 -84382832 - AluSq SINE Alu 0 313 1 23 0 0 0 chr17 5121767 5121790 -84382763 + AT_rich Low_complexity Low_complexity 1 23 0 577 196 38 23 chr17 5121790 5121923 -84382630 - AluJb SINE Alu -176 136 2 300 47 23 0 chr17 5122394 5122437 -84382116 + L1P2 LINE L1 5758 5801 -354 339 171 11 34 chr17 5122535 5122623 -84381930 + L1MA9 LINE L1 6222 6307 -5 1119 290 96 47 chr17 5122943 5123028 -84381525 + L2 LINE L2 316 395 -2919 2058 158 0 3 chr17 5123028 5123332 -84381221 - AluJb SINE Alu -5 307 5 1119 290 96 47 chr17 5123332 5123904 -84380649 + L2 LINE L2 395 1005 -2309 911 126 0 0 chr17 5124008 5124127 -84380426 + AluSg/x SINE Alu 169 287 -23 2453 101 0 0 chr17 5124127 5124435 -84380118 + AluSx SINE Alu 1 308 -4 1904 116 0 56 chr17 5124624 5124908 -84379645 - AluSq SINE Alu -16 297 30 2087 127 20 0 chr17 5125044 5125336 -84379217 + AluSx SINE Alu 1 298 -14 216 209 0 0 chr17 5125658 5125701 -84378852 + A-rich Low_complexity Low_complexity 1 43 0 2160 90 45 3 chr17 5126413 5126701 -84377852 + AluSp SINE Alu 2 301 -12 229 357 66 50 chr17 5126983 5127302 -84377251 + L2 LINE L2 2864 3187 -85 2275 62 4 7 chr17 5127444 5127718 -84376835 + AluSp SINE Alu 32 304 -9 207 204 0 0 chr17 5128057 5128106 -84376447 + T-rich Low_complexity Low_complexity 3 51 0 4493 36 0 12 chr17 5128106 5128608 -84375945 - SVA Other Other 0 1386 891 2145 107 24 0 chr17 5128908 5129198 -84375355 - AluSx SINE Alu -15 297 1 250 208 56 14 chr17 5130072 5130144 -84374409 - MIR SINE MIR -75 187 113 293 51 0 0 chr17 5130624 5130663 -84373890 - Alu SINE Alu -245 58 20 1511 99 33 9 chr17 5130701 5130913 -84373640 + AluSg/x SINE Alu 89 305 -5 419 310 71 25 chr17 5131182 5131379 -84373174 - MIR SINE MIR 0 262 57 1995 125 13 3 chr17 5132477 5132781 -84371772 + AluSq SINE Alu 1 307 -6 291 204 146 39 chr17 5132781 5132884 -84371669 + MLT1A2 LTR MaLR 161 274 -100 2345 79 0 0 chr17 5134109 5134389 -84370164 - AluSq SINE Alu -16 297 18 2409 83 0 13 chr17 5134560 5134874 -84369679 - AluSg SINE Alu 0 310 1 2652 67 0 0 chr17 5134879 5135191 -84369362 - AluSx SINE Alu 0 312 1 213 204 23 11 chr17 5135741 5135829 -84368724 + CT-rich Low_complexity Low_complexity 1 89 0 1093 153 37 104 chr17 5136124 5136712 -84367841 - MER4C LTR ERV1 -15 450 1 1037 74 7 14 chr17 5137809 5137957 -84366596 - AluY SINE Alu -1 310 164 2195 114 7 13 chr17 5138256 5138562 -84365991 - AluSx SINE Alu -8 304 1 231 314 49 10 chr17 5138791 5138893 -84365660 - MIR3 SINE MIR -100 108 3 207 185 158 87 chr17 5139012 5139115 -84365438 + MIR SINE MIR 27 138 -70 1758 166 10 30 chr17 5139361 5139663 -84364890 + AluJo SINE Alu 1 296 -16 2347 76 3 7 chr17 5139666 5139957 -84364596 + AluSp SINE Alu 1 290 -23 210 175 0 25 chr17 5139982 5140022 -84364531 + GA-rich Low_complexity Low_complexity 3 41 0 230 83 83 21 chr17 5140450 5140498 -84364055 + LTR41 LTR ERVL 711 761 -12 2229 115 0 7 chr17 5141266 5141562 -84362991 - AluSx SINE Alu -18 294 1 3465 209 42 68 chr17 5141997 5142442 -84362111 - MLT-int LTR MaLR -753 982 570 2223 107 3 0 chr17 5142442 5142733 -84361820 + AluSq SINE Alu 1 292 -21 3465 209 42 68 chr17 5142733 5143175 -84361378 - MLT-int LTR MaLR -1165 570 118 2086 126 7 3 chr17 5143175 5143469 -84361084 - AluSx SINE Alu -17 295 1 2170 105 18 0 chr17 5143759 5144045 -84360508 + AluSc SINE Alu 2 292 -17 1380 105 0 0 chr17 5144415 5144587 -84359966 - AluSq SINE Alu -141 172 1 180 0 0 0 chr17 5145175 5145195 -84359358 + (G)n Simple_repeat Simple_repeat 1 20 0 1650 110 68 48 chr17 5145505 5145797 -84358756 + AluSp SINE Alu 2 299 -14 1525 164 42 18 chr17 5146302 5146426 -84358127 + AluJo SINE Alu 1 120 -182 2071 130 3 29 chr17 5146426 5146563 -84357990 + AluSx SINE Alu 1 140 -172 2307 92 0 4 chr17 5146563 5146888 -84357665 + AluSq SINE Alu 5 328 0 2071 130 3 29 chr17 5146888 5147080 -84357473 + AluSx SINE Alu 140 312 0 1525 164 42 18 chr17 5147080 5147241 -84357312 + AluJo SINE Alu 120 293 -9 2516 58 10 0 chr17 5147243 5147535 -84357018 + AluY SINE Alu 1 295 -16 1605 172 8 0 chr17 5147871 5148127 -84356426 + AluJo SINE Alu 10 267 -45 318 307 66 49 chr17 5152050 5152294 -84352259 + L1M2 LINE L1 1665 1912 -4937 545 272 78 56 chr17 5152394 5152606 -84351947 + L2 LINE L2 2913 3138 -175 1954 138 51 0 chr17 5152606 5152902 -84351651 - AluSx SINE Alu -1 311 1 545 272 78 56 chr17 5152902 5153046 -84351507 + L2 LINE L2 3138 3277 -36 2134 113 19 13 chr17 5153208 5153517 -84351036 + AluSx SINE Alu 1 311 -1 2374 70 3 3 chr17 5153790 5154098 -84350455 + AluSp SINE Alu 2 309 0 305 295 11 0 chr17 5154381 5154476 -84350077 - MIR3 SINE MIR -2 206 111 1679 167 7 7 chr17 5154524 5154627 -84349926 + AluJb SINE Alu 31 133 -179 2359 105 0 0 chr17 5154627 5154921 -84349632 + AluSq SINE Alu 1 294 -19 1679 167 7 7 chr17 5154921 5155099 -84349454 + AluJb SINE Alu 132 312 0 2275 96 7 0 chr17 5155644 5155935 -84348618 + AluSc SINE Alu 5 297 -12 556 98 0 12 chr17 5156072 5156154 -84348399 - AluJb SINE Alu -148 164 84 1774 132 38 0 chr17 5156201 5156466 -84348087 + AluSx SINE Alu 18 292 -20 26 50 0 0 chr17 5156467 5156507 -84348046 + AT_rich Low_complexity Low_complexity 1 40 0 2259 96 20 0 chr17 5156560 5156852 -84347701 + AluSp SINE Alu 1 298 -15 2288 96 3 7 chr17 5156854 5157156 -84347397 + AluY SINE Alu 1 301 -10 2312 94 10 3 chr17 5157717 5158026 -84346527 - AluY SINE Alu 0 311 1 2046 143 10 0 chr17 5158076 5158377 -84346176 - AluJo SINE Alu -8 304 1 740 251 157 61 chr17 5158510 5158969 -84345584 - LTR33 LTR ERVL -9 512 10 585 331 74 46 chr17 5159020 5159455 -84345098 + L2 LINE L2 2196 2642 -672 282 80 20 0 chr17 5159480 5159530 -84345023 - AluY SINE Alu -169 132 82 1526 109 14 0 chr17 5159530 5159741 -84344812 - AluY SINE Alu -94 217 4 997 272 71 57 chr17 5160112 5160608 -84343945 - MLT1J LTR MaLR -8 503 1 1702 182 0 14 chr17 5160667 5160953 -84343600 - AluJo SINE Alu -30 282 1 258 315 87 8 chr17 5161190 5161444 -84343109 + L1M4 LINE L1 4672 4945 -1201 2026 144 7 0 chr17 5161668 5161959 -84342594 - AluSx SINE Alu -14 298 6 811 117 23 8 chr17 5162240 5162368 -84342185 - AluJb SINE Alu -7 305 176 910 157 7 20 chr17 5164171 5164318 -84340235 - FRAM SINE Alu -14 162 18 742 205 0 0 chr17 5165226 5165343 -84339210 - FLAM_C SINE Alu -25 118 2 493 260 113 23 chr17 5165448 5165625 -84338928 + MIR3 SINE MIR 9 201 -7 536 218 171 64 chr17 5165686 5165781 -84338772 - MIR SINE MIR -2 260 177 479 167 49 0 chr17 5165781 5165883 -84338670 - L1MB8 LINE L1 0 6178 6072 536 218 171 64 chr17 5165883 5166021 -84338532 - MIR SINE MIR -85 177 2 987 218 119 48 chr17 5169251 5169628 -84334925 - MLT1C LTR MaLR -58 409 6 1618 218 139 37 chr17 5169674 5169887 -84334666 + L1ME3A LINE L1 4399 4589 -1557 347 0 23 0 chr17 5169887 5169930 -84334623 + (TG)n Simple_repeat Simple_repeat 1 44 0 1618 218 139 37 chr17 5169930 5170412 -84334141 + L1ME3A LINE L1 4589 5165 -981 2080 110 10 20 chr17 5170412 5170711 -84333842 + AluSg SINE Alu 1 296 -14 885 260 89 41 chr17 5170727 5171173 -84333380 + L1ME3A LINE L1 5407 5902 -268 1888 157 7 0 chr17 5171173 5171467 -84333086 + AluJb SINE Alu 6 301 -11 885 260 89 41 chr17 5171467 5171533 -84333020 + L1ME3A LINE L1 5902 5963 -207 2341 98 3 0 chr17 5171742 5172038 -84332515 - AluSp SINE Alu -16 297 1 2236 116 0 3 chr17 5172105 5172406 -84332147 - AluSg SINE Alu -10 300 1 1624 185 13 10 chr17 5173192 5173490 -84331063 - AluJo SINE Alu -13 299 1 33 43 0 0 chr17 5174183 5174230 -84330323 + AT_rich Low_complexity Low_complexity 1 47 0 2299 106 6 3 chr17 5174748 5175060 -84329493 - AluSp SINE Alu 0 313 1 2015 143 10 0 chr17 5175191 5175484 -84329069 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 5175486 5175530 -84329023 + AT_rich Low_complexity Low_complexity 1 44 -50 2344 107 0 0 chr17 5175530 5175840 -84328713 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 5175840 5175890 -84328663 + AT_rich Low_complexity Low_complexity 44 94 0 683 234 116 111 chr17 5176024 5176105 -84328448 - L2 LINE L2 -799 2515 2436 2145 98 14 0 chr17 5176105 5176380 -84328173 - AluSc SINE Alu -30 279 1 683 234 116 111 chr17 5176380 5176739 -84327814 - L2 LINE L2 -878 2436 2073 1905 127 7 14 chr17 5176739 5177031 -84327522 + AluSx SINE Alu 1 290 -22 2715 13 10 7 chr17 5177506 5177810 -84326743 + AluYa5 SINE Alu 1 305 -6 2209 103 4 0 chr17 5177912 5178236 -84326317 + AluSx SINE Alu 1 325 0 582 259 24 24 chr17 5178346 5178512 -84326041 + MER5A DNA MER1_type 24 189 0 2042 112 46 0 chr17 5178522 5178807 -84325746 - AluSp SINE Alu -15 298 1 281 254 111 40 chr17 5179136 5179262 -84325291 - Charlie2 DNA MER1_type -797 2065 1931 1365 191 8 12 chr17 5179270 5179527 -84325026 + AluJb SINE Alu 18 273 -39 593 61 91 0 chr17 5179686 5179785 -84324768 - AluSq/x SINE Alu -205 108 1 1440 146 11 52 chr17 5179945 5180072 -84324481 + AluJb SINE Alu 3 115 -197 2226 103 3 0 chr17 5180072 5180363 -84324190 + AluSc SINE Alu 2 293 -16 1440 146 11 52 chr17 5180363 5180503 -84324050 + AluJb SINE Alu 115 259 -53 486 143 112 0 chr17 5180503 5180601 -84323952 + FRAM SINE Alu 67 175 -1 2161 101 50 0 chr17 5181149 5181446 -84323107 + AluSq SINE Alu 1 312 -1 330 186 0 0 chr17 5181747 5181806 -84322747 + L1MB5 LINE L1 5902 5960 -214 2184 120 7 3 chr17 5181886 5182194 -84322359 + AluSp SINE Alu 3 311 -2 366 229 8 29 chr17 5182248 5182391 -84322162 + L1ME LINE L1 5314 5455 -701 1821 171 7 0 chr17 5182413 5182705 -84321848 + AluJb SINE Alu 1 294 -18 265 283 33 0 chr17 5182883 5182975 -84321578 - L1ME LINE L1 -459 5662 5568 2328 90 3 6 chr17 5183066 5183378 -84321175 + AluSq SINE Alu 3 313 0 1288 86 0 131 chr17 5183510 5183594 -84320959 - AluSx SINE Alu -119 193 100 2156 78 50 0 chr17 5183594 5183877 -84320676 - AluY SINE Alu -14 297 1 1288 86 0 131 chr17 5183877 5184014 -84320539 - AluSx SINE Alu -212 100 1 1993 145 0 0 chr17 5184183 5184472 -84320081 + AluJb SINE Alu 1 289 -23 2202 116 3 0 chr17 5184566 5184858 -84319695 + AluSg SINE Alu 2 294 -16 334 203 125 55 chr17 5184924 5185052 -84319501 + MLT1B LTR MaLR 2 138 -252 1451 181 4 0 chr17 5185052 5185290 -84319263 + AluJo SINE Alu 1 239 -73 549 189 0 27 chr17 5185292 5185403 -84319150 + AluJb SINE Alu 202 309 -3 427 215 16 0 chr17 5185403 5185524 -84319029 + GA-rich Low_complexity Low_complexity 1 123 0 218 171 0 0 chr17 5185539 5185574 -84318979 + CT-rich Low_complexity Low_complexity 1 35 0 804 192 13 0 chr17 5185625 5185781 -84318772 + MLT1B LTR MaLR 192 349 -41 247 162 0 0 chr17 5185824 5185861 -84318692 + MLT1B LTR MaLR 354 390 0 2079 93 6 42 chr17 5185920 5186231 -84318322 - AluSg SINE Alu -9 301 2 649 280 63 19 chr17 5186240 5186552 -84318001 + L1ME LINE L1 5479 5806 -360 1978 133 0 17 chr17 5186552 5186845 -84317708 + AluJb SINE Alu 11 298 -14 2356 72 10 3 chr17 5186845 5187138 -84317415 + AluSc SINE Alu 1 295 -14 386 171 0 14 chr17 5187139 5187209 -84317344 + MLT1C LTR MaLR 399 467 0 330 45 0 0 chr17 5187298 5187342 -84317211 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2131 115 7 0 chr17 5187342 5187621 -84316932 - AluSq SINE Alu -32 281 1 315 310 147 16 chr17 5187624 5187753 -84316800 - MIR3 SINE MIR -61 147 2 553 189 8 45 chr17 5188045 5188177 -84316376 - FAM SINE Alu -5 44 1 2307 117 3 0 chr17 5188206 5188514 -84316039 - AluSx SINE Alu -3 309 1 26 50 0 0 chr17 5188715 5188755 -84315798 + AT_rich Low_complexity Low_complexity 1 40 0 629 185 174 34 chr17 5189405 5189458 -84315095 - MER3 DNA MER1_type -3 206 162 1657 191 10 16 chr17 5189458 5189772 -84314781 + AluJb SINE Alu 1 312 0 629 185 174 34 chr17 5189772 5189896 -84314657 - MER3 DNA MER1_type -47 162 4 229 203 90 8 chr17 5193286 5193419 -84311134 + (TA)n Simple_repeat Simple_repeat 1 144 0 * 239 222 30 30 chr17 5193329 5193428 -84311125 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 1682 135 16 64 chr17 5193701 5193874 -84310679 - AluSx SINE Alu -15 297 144 6371 36 0 14 chr17 5193874 5194604 -84309949 - SVA Other Other -2 1384 665 1682 135 16 64 chr17 5194604 5194742 -84309811 - AluSx SINE Alu -168 144 1 1723 124 86 4 chr17 5196363 5196630 -84307923 - MER7A DNA MER2_type -4 342 56 444 153 0 28 chr17 5196630 5196702 -84307851 + AluJ/FRAM SINE Alu 220 289 -23 2650 58 0 0 chr17 5197486 5197796 -84306757 - AluY SINE Alu 0 311 2 2042 127 3 3 chr17 5199362 5199661 -84304892 - AluSc SINE Alu -10 299 1 2395 61 14 3 chr17 5199673 5199969 -84304584 - AluY SINE Alu -12 299 1 820 163 0 15 chr17 5200071 5200206 -84304347 - FLAM_C SINE Alu 0 133 1 625 178 29 106 chr17 5200267 5200392 -84304161 - LTR41 LTR ERVL -2 771 638 2066 116 0 33 chr17 5200392 5200693 -84303860 + AluSx SINE Alu 1 291 -21 1899 166 0 7 chr17 5200703 5200993 -84303560 + AluJb SINE Alu 1 288 -24 625 178 29 106 chr17 5200993 5201064 -84303489 - LTR41 LTR ERVL -144 629 580 623 237 124 27 chr17 5201129 5201315 -84303238 - MER63A DNA MER1_type 0 210 7 339 173 298 19 chr17 5201316 5201420 -84303133 + FLAM_A SINE Alu 1 133 0 213 264 138 50 chr17 5201470 5201629 -84302924 - L2 LINE L2 -471 2843 2671 399 310 44 0 chr17 5202166 5202279 -84302274 - MIR SINE MIR -121 141 24 27 0 0 0 chr17 5202452 5202479 -84302074 + AT_rich Low_complexity Low_complexity 1 27 0 2418 78 0 3 chr17 5202489 5202783 -84301770 + AluSq SINE Alu 5 297 -16 1866 164 13 0 chr17 5202953 5203252 -84301301 + AluJb SINE Alu 1 303 -9 1085 215 113 58 chr17 5203260 5203434 -84301119 + L1MEc LINE L1 39 202 -6194 1527 123 192 0 chr17 5203434 5203695 -84300858 - AluJb SINE Alu -1 311 1 1085 215 113 58 chr17 5203695 5203902 -84300651 + L1MEc LINE L1 202 441 -5955 498 165 52 0 chr17 5204594 5204691 -84299862 - Charlie1 DNA MER1_type -30 2731 2630 549 205 74 95 chr17 5204701 5204839 -84299714 - Charlie1 DNA MER1_type -2544 217 83 2081 130 0 22 chr17 5204839 5205155 -84299398 + AluJb SINE Alu 1 309 -3 549 205 74 95 chr17 5205155 5205206 -84299347 - Charlie1 DNA MER1_type -2678 83 32 345 271 146 35 chr17 5205247 5205391 -84299162 - MIR SINE MIR -24 238 79 1681 153 44 24 chr17 5206781 5207076 -84297477 + AluJb SINE Alu 1 301 -11 1367 152 0 0 chr17 5208975 5209213 -84295340 - AluJb SINE Alu 0 322 85 704 281 92 41 chr17 5209293 5209781 -84294772 - L1ME4a LINE L1 -1 6120 5608 2069 156 99 21 chr17 5210974 5211398 -84293155 + MSTB2 LTR MaLR 1 457 0 1054 146 0 0 chr17 5212283 5212454 -84292099 + AluSg/x SINE Alu 131 301 0 2097 119 14 0 chr17 5212585 5212871 -84291682 - AluSq SINE Alu -23 290 1 779 61 0 0 chr17 5213572 5213671 -84290882 - L1PA4 LINE L1 -2 6153 6055 2786 34 3 0 chr17 5213671 5213996 -84290557 + L1P2 LINE L1 5449 5774 -381 1565 170 48 15 chr17 5214848 5215118 -84289435 + AluJo SINE Alu 6 319 0 208 114 0 0 chr17 5215118 5215153 -84289400 + (TAA)n Simple_repeat Simple_repeat 2 180 0 2331 94 0 29 chr17 5215660 5215968 -84288585 + AluSx SINE Alu 1 299 -13 2314 110 0 3 chr17 5216026 5216335 -84288218 + AluSc SINE Alu 1 308 -1 2020 116 14 83 chr17 5218920 5219282 -84285271 + MER1B DNA MER1_type 1 337 0 2476 97 3 0 chr17 5219890 5220201 -84284352 + AluSp SINE Alu 1 312 -1 438 260 97 41 chr17 5220467 5220690 -84283863 + L1M4 LINE L1 2963 3211 -2935 2331 80 0 7 chr17 5220690 5220991 -84283562 + AluY SINE Alu 1 299 -12 438 260 97 41 chr17 5220991 5221086 -84283467 + L1M4 LINE L1 3211 3299 -2847 1003 88 0 0 chr17 5221205 5221330 -84283223 + AluSq/x SINE Alu 1 125 -187 2268 109 3 0 chr17 5221334 5221637 -84282916 + AluSg SINE Alu 1 304 -6 709 281 55 46 chr17 5221639 5222205 -84282348 + L1M4 LINE L1 3422 3992 -2154 242 247 21 10 chr17 5222511 5222608 -84281945 + L1M4 LINE L1 4272 4369 -1777 1751 133 10 45 chr17 5223652 5223960 -84280593 - AluSq SINE Alu -16 297 1 720 140 0 18 chr17 5224146 5224260 -84280293 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 5224267 5224293 -84280260 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 5228306 5228335 -84276218 + AT_rich Low_complexity Low_complexity 1 29 0 635 251 15 41 chr17 5228336 5228531 -84276022 - LTR41 LTR ERVL -583 190 1 2272 127 17 17 chr17 5228775 5229130 -84275423 - THE1A LTR MaLR 0 355 1 11729 91 10 8 chr17 5229130 5230707 -84273846 - THE1A-int LTR MaLR 0 1580 1 2485 112 6 8 chr17 5230707 5231063 -84273490 - THE1A LTR MaLR 0 355 1 1157 242 11 23 chr17 5231166 5231430 -84273123 + MIR SINE MIR 2 262 0 845 138 23 0 chr17 5231506 5231636 -84272917 - FLAM_C SINE Alu 0 133 1 2426 78 0 0 chr17 5232372 5232668 -84271885 - AluY SINE Alu -15 296 1 24 0 0 0 chr17 5232679 5232703 -84271850 + AT_rich Low_complexity Low_complexity 1 24 0 757 161 0 0 chr17 5232754 5232866 -84271687 - FLAM_C SINE Alu -30 113 2 1759 164 44 0 chr17 5232868 5233161 -84271392 - AluJb SINE Alu -6 306 1 1554 163 67 14 chr17 5233161 5233442 -84271111 - AluJo SINE Alu -15 297 1 2186 112 3 7 chr17 5233711 5234005 -84270548 + AluSx SINE Alu 1 293 -19 2030 195 101 43 chr17 5234324 5234857 -84269696 + LTR6A LTR ERV1 1 564 0 1790 88 0 0 chr17 5235850 5236077 -84268476 - AluSg/x SINE Alu -14 298 72 572 291 0 55 chr17 5236195 5236394 -84268159 + MIR SINE MIR 3 190 -72 2131 109 3 10 chr17 5236827 5237130 -84267423 + AluSx SINE Alu 1 301 -11 1825 73 0 0 chr17 5237249 5237483 -84267070 + L1PA6 LINE L1 5919 6152 -2 1932 129 3 45 chr17 5237519 5237829 -84266724 + AluSx SINE Alu 1 297 -15 1193 148 6 0 chr17 5237829 5238005 -84266548 + AluSg/x SINE Alu 132 308 -2 300 246 158 35 chr17 5238094 5238208 -84266345 + L2 LINE L2 3186 3313 0 27 49 0 0 chr17 5238416 5238457 -84266096 + AT_rich Low_complexity Low_complexity 1 41 0 1304 161 81 22 chr17 5238528 5238801 -84265752 - AluJo SINE Alu -11 301 13 252 0 0 0 chr17 5238830 5238858 -84265695 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1492 193 4 22 chr17 5238877 5239152 -84265401 - AluJo SINE Alu -42 270 1 2320 86 0 0 chr17 5239159 5239469 -84265084 - AluSc SINE Alu 0 310 1 2960 176 98 41 chr17 5239490 5240176 -84264377 - MER21B LTR ERV1 -45 818 94 2167 125 3 6 chr17 5240182 5240493 -84264060 - AluSp SINE Alu -3 310 1 1964 148 0 0 chr17 5240494 5240792 -84263761 - AluSx SINE Alu -12 300 3 2378 99 0 13 chr17 5240869 5241183 -84263370 - AluSp SINE Alu -3 310 1 327 232 32 74 chr17 5241407 5241502 -84263051 - L2 LINE L2 -9 3263 3173 269 288 12 0 chr17 5241512 5241592 -84262961 - L1ME LINE L1 -357 5764 5684 1248 141 20 43 chr17 5241635 5241890 -84262663 + Charlie1b DNA MER1_type 59 307 -216 1119 203 11 23 chr17 5241890 5242156 -84262397 - AluJo SINE Alu -11 301 39 2308 107 3 3 chr17 5242336 5242645 -84261908 + AluSx SINE Alu 1 309 -3 426 282 141 33 chr17 5242674 5242887 -84261666 + MIR SINE MIR 21 256 -6 2139 105 3 3 chr17 5243053 5243348 -84261205 + AluSx SINE Alu 1 295 -17 2204 117 0 7 chr17 5243348 5243648 -84260905 + AluSg SINE Alu 1 298 -12 1406 150 0 0 chr17 5244421 5244628 -84259925 - AluSq SINE Alu -7 306 100 2247 81 0 7 chr17 5244630 5244915 -84259638 - AluY SINE Alu -28 283 1 2070 111 3 20 chr17 5245121 5245419 -84259134 - AluSx SINE Alu -19 293 1 253 314 49 10 chr17 5245650 5245752 -84258801 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 5245871 5245974 -84258579 + MIR SINE MIR 27 138 -70 230 329 0 0 chr17 5246366 5246442 -84258111 - L1ME LINE L1 -331 5839 5764 1412 183 20 53 chr17 5246446 5246746 -84257807 - AluJo SINE Alu -22 290 1 248 208 0 0 chr17 5246750 5246798 -84257755 - L1ME LINE L1 -387 5783 5736 522 260 27 0 chr17 5246852 5246998 -84257555 - L1ME LINE L1 -428 5742 5593 2356 112 0 3 chr17 5247012 5247325 -84257228 - AluSx SINE Alu 0 312 1 2214 89 3 7 chr17 5247795 5248087 -84256466 - AluY SINE Alu -6 305 15 2377 95 0 0 chr17 5248091 5248387 -84256166 - AluY SINE Alu -15 296 1 938 204 71 82 chr17 5248397 5248775 -84255778 - MLT1A2 LTR MaLR 0 374 1 1974 143 0 17 chr17 5248802 5249102 -84255451 - AluSx SINE Alu -17 295 1 1607 161 75 7 chr17 5249131 5249411 -84255142 + AluJb SINE Alu 1 299 -13 484 278 73 122 chr17 5249570 5249955 -84254598 + L2 LINE L2 2948 3313 0 751 260 25 54 chr17 5249955 5250062 -84254491 - MIR SINE MIR 0 262 153 2437 72 0 10 chr17 5250062 5250368 -84254185 - AluY SINE Alu -8 303 1 751 260 25 54 chr17 5250368 5250502 -84254051 - MIR SINE MIR -109 153 28 2218 111 34 0 chr17 5250643 5250941 -84253612 - AluSx SINE Alu 0 312 5 1876 153 0 10 chr17 5251188 5251476 -84253077 - AluJb SINE Alu -13 299 15 205 229 183 46 chr17 5251540 5251671 -84252882 + MIR3 SINE MIR 11 159 -49 2037 74 4 0 chr17 5253340 5253612 -84250941 + AluSp SINE Alu 39 311 0 622 300 155 51 chr17 5253822 5254017 -84250536 + L2 LINE L2 2006 2179 -1093 2084 118 0 30 chr17 5254017 5254322 -84250231 - AluSx SINE Alu -16 296 1 622 300 155 51 chr17 5254322 5254930 -84249623 + L2 LINE L2 2179 2722 -550 2385 107 0 0 chr17 5254930 5255239 -84249314 + AluSg SINE Alu 1 309 -1 622 300 155 51 chr17 5255239 5255552 -84249001 + L2 LINE L2 2722 3266 -6 332 293 136 21 chr17 5255651 5255791 -84248762 + L2 LINE L2 3151 3306 -7 2251 102 13 3 chr17 5256047 5256350 -84248203 + AluSq SINE Alu 1 306 -7 2154 132 7 0 chr17 5256486 5256782 -84247771 + AluSx SINE Alu 1 298 -14 483 239 90 0 chr17 5256921 5257055 -84247498 - MLT1L LTR MaLR 0 615 470 402 209 181 60 chr17 5257082 5257186 -84247367 - MLT1L LTR MaLR -211 404 314 2237 92 46 0 chr17 5257186 5257470 -84247083 - AluSc SINE Alu -12 297 1 402 209 181 60 chr17 5257470 5257547 -84247006 - MLT1L LTR MaLR -301 314 201 1954 167 39 28 chr17 5257549 5257756 -84246797 - MLT1A1 LTR MaLR -1 364 150 1914 156 0 56 chr17 5257756 5257925 -84246628 - AluJo SINE Alu -9 303 159 2397 92 0 10 chr17 5257925 5258229 -84246324 - AluY SINE Alu -10 301 1 1914 156 0 56 chr17 5258229 5258380 -84246173 - AluJo SINE Alu -153 159 1 1954 167 39 28 chr17 5258380 5258532 -84246021 - MLT1A1 LTR MaLR -215 150 1 6242 198 66 46 chr17 5258532 5259697 -84244856 - MLT1A1-int LTR MaLR 0 1735 534 2172 126 3 3 chr17 5259697 5260007 -84244546 + AluSq SINE Alu 1 310 -3 6242 198 66 46 chr17 5260007 5260309 -84244244 - MLT1A1-int LTR MaLR -1201 534 239 1294 296 40 30 chr17 5265148 5265820 -84238733 - L1MC3 LINE L1 -1621 6164 5486 257 178 10 139 chr17 5271114 5271215 -84233338 + SN5 Other centromeric 300 387 -68 2003 161 24 3 chr17 5272215 5272551 -84232002 - MER2 DNA MER2_type 0 344 2 183 80 0 0 chr17 5272631 5272656 -84231897 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 216 182 23 0 chr17 5273140 5273184 -84231369 + C-rich Low_complexity Low_complexity 4 48 0 213 204 23 11 chr17 5273495 5273583 -84230970 + GA-rich Low_complexity Low_complexity 1 89 0 2265 92 3 3 chr17 5274136 5274442 -84230111 + AluSp SINE Alu 1 306 -7 585 64 0 0 chr17 5274488 5274566 -84229987 + (TG)n Simple_repeat Simple_repeat 2 79 0 3105 136 4 10 chr17 5274765 5275251 -84229302 - MER1A DNA MER1_type 0 529 47 766 161 14 156 chr17 5275446 5275657 -84228896 - MLT1C LTR MaLR 0 467 210 238 108 37 0 chr17 5275657 5275708 -84228845 + MLT-int LTR MaLR 142 216 -1155 270 160 0 0 chr17 5276281 5276331 -84228222 + (CGTG)n Simple_repeat Simple_repeat 3 52 0 201 121 0 0 chr17 5276380 5276413 -84228140 + (TG)n Simple_repeat Simple_repeat 2 34 0 192 346 38 53 chr17 5278009 5278405 -84226148 + L2 LINE L2 2498 2887 -427 319 259 126 21 chr17 5279229 5279372 -84225181 + MIR3 SINE MIR 44 201 -7 216 0 0 0 chr17 5279705 5279729 -84224824 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 311 319 104 7 chr17 5280346 5280481 -84224072 + MIR SINE MIR 81 228 -34 24 0 0 0 chr17 5280508 5280532 -84224021 + AT_rich Low_complexity Low_complexity 1 24 0 349 263 256 7 chr17 5281156 5281293 -84223260 + LTR28 LTR ERV1 8 178 -842 339 163 23 47 chr17 5281304 5281390 -84223163 + LTR1 LTR ERV1 107 190 -595 * 2377 223 65 39 chr17 5281359 5282054 -84222499 + LTR28 LTR ERV1 308 1020 0 1533 118 126 37 chr17 5282161 5282431 -84222122 - AluSg SINE Alu -14 296 3 501 265 107 20 chr17 5282467 5282663 -84221890 + L2 LINE L2 2587 2799 -515 241 261 76 89 chr17 5282684 5282715 -84221838 - L2 LINE L2 0 3313 3283 2280 81 0 0 chr17 5282715 5283012 -84221541 - AluSg SINE Alu -13 297 1 241 261 76 89 chr17 5283012 5283137 -84221416 - L2 LINE L2 -30 3283 3159 212 271 127 34 chr17 5283251 5283369 -84221184 + L2 LINE L2 2884 3012 -301 * 435 312 102 10 chr17 5283355 5283560 -84220993 - MIR SINE MIR -8 254 31 1952 118 3 0 chr17 5284698 5284986 -84219567 - AluSx SINE Alu -23 289 1 735 176 142 0 chr17 5285211 5285387 -84219166 - MLT1A2 LTR MaLR 0 374 174 2019 117 3 7 chr17 5285404 5285713 -84218840 - AluSx SINE Alu -4 308 1 277 248 19 43 chr17 5286137 5286298 -84218255 + A-rich Low_complexity Low_complexity 6 162 0 390 318 60 35 chr17 5286825 5287026 -84217527 + MIR SINE MIR 57 262 0 1006 177 28 19 chr17 5287295 5287510 -84217043 - AluSg/x SINE Alu -5 307 91 2490 0 0 17 chr17 5287546 5287839 -84216714 + AluYa5 SINE Alu 18 305 -6 2112 100 4 0 chr17 5287941 5288260 -84216293 + AluSx SINE Alu 1 320 0 601 271 18 18 chr17 5288371 5288537 -84216016 + MER5A DNA MER1_type 24 189 0 1938 115 45 0 chr17 5288545 5288832 -84215721 - AluSp SINE Alu -13 300 1 260 252 110 47 chr17 5289162 5289289 -84215264 - Charlie2 DNA MER1_type -797 2065 1931 1475 190 3 27 chr17 5289297 5289568 -84214985 + AluJb SINE Alu 18 283 -29 264 30 0 0 chr17 5289568 5289601 -84214952 + (TATAA)n Simple_repeat Simple_repeat 4 36 0 1475 190 3 27 chr17 5289601 5289629 -84214924 + AluJb SINE Alu 283 310 -2 406 320 28 39 chr17 5289630 5289811 -84214742 - Charlie2 DNA MER1_type -2683 179 1 1436 87 36 14 chr17 5289885 5290104 -84214449 + AluY SINE Alu 84 307 -4 596 199 12 53 chr17 5290585 5290756 -84213797 + Charlie2 DNA MER1_type 2692 2855 -7 2112 114 3 0 chr17 5291141 5291440 -84213113 - AluSx SINE Alu -12 300 1 1537 127 91 36 chr17 5291683 5291958 -84212595 - AluJb SINE Alu -22 290 1 289 286 13 0 chr17 5291986 5292063 -84212490 + L2 LINE L2 3186 3263 -9 193 327 35 44 chr17 5293260 5293373 -84211180 - L2 LINE L2 -219 3053 2942 199 319 42 0 chr17 5293380 5293452 -84211101 + L2 LINE L2 2884 2958 -356 2067 103 3 10 chr17 5293470 5293780 -84210773 - AluSp SINE Alu -5 308 1 2184 78 3 19 chr17 5293786 5294093 -84210460 - AluSq SINE Alu -11 302 1 228 224 0 0 chr17 5294201 5294250 -84210303 - MLT1K LTR MaLR -339 249 201 303 353 101 29 chr17 5294452 5294575 -84209978 + L2 LINE L2 1019 1132 -2182 2066 107 3 17 chr17 5294575 5294709 -84209844 + AluSg SINE Alu 1 135 -175 2277 98 3 0 chr17 5294709 5295016 -84209537 + AluSg SINE Alu 1 308 -2 2066 107 3 17 chr17 5295016 5295179 -84209374 + AluSg SINE Alu 135 294 -16 303 353 101 29 chr17 5295179 5295361 -84209192 + L2 LINE L2 1132 1346 -1968 589 180 73 101 chr17 5295549 5295567 -84208986 - MER5B DNA MER1_type -2 176 159 7798 64 2 3 chr17 5295567 5296537 -84208016 + LTR5 LTR ERVK 1 969 0 589 180 73 101 chr17 5296537 5296696 -84207857 - MER5B DNA MER1_type -19 159 4 970 136 14 127 chr17 5296707 5296856 -84207697 + MER5A DNA MER1_type 1 121 -68 2048 120 3 19 chr17 5296856 5297173 -84207380 - AluSx SINE Alu 0 312 1 970 136 14 127 chr17 5297173 5297236 -84207317 + MER5A DNA MER1_type 121 189 0 2260 99 0 3 chr17 5297339 5297653 -84206900 - AluSp SINE Alu 0 313 1 2001 123 0 3 chr17 5298056 5298378 -84206175 - AluSx SINE Alu 0 321 1 420 226 0 12 chr17 5298788 5298872 -84205681 + Tigger5 DNA MER2_type 1 83 -2240 1221 111 12 0 chr17 5298878 5299049 -84205504 - AluSg/x SINE Alu -2 310 138 846 87 17 0 chr17 5299080 5299195 -84205358 + AluSq/x SINE Alu 1 117 -195 2049 115 26 0 chr17 5299195 5299499 -84205054 - AluSx SINE Alu 0 312 1 477 181 0 0 chr17 5299499 5299582 -84204971 + Tigger5 DNA MER2_type 2241 2323 0 372 236 28 69 chr17 5300052 5300196 -84204357 - MER117 DNA MER1_type -57 140 3 976 113 0 0 chr17 5300358 5300500 -84204053 - AluSp/q SINE Alu -4 309 168 1004 149 24 100 chr17 5300500 5300749 -84203804 - L1 LINE L1 -1114 5032 4803 2130 113 3 3 chr17 5300799 5301100 -84203453 + AluSx SINE Alu 10 310 -2 2091 75 6 53 chr17 5301419 5301738 -84202815 + AluSg SINE Alu 2 305 -5 743 189 13 19 chr17 5301877 5302036 -84202517 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 5302087 5302122 -84202431 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 5302137 5302258 -84202295 + CT-rich Low_complexity Low_complexity 1 123 0 595 180 0 27 chr17 5302258 5302369 -84202184 - AluJb SINE Alu -3 309 202 1359 177 0 4 chr17 5302371 5302603 -84201950 - AluJo SINE Alu -73 239 9 327 207 129 43 chr17 5302626 5302742 -84201811 - MLT1B LTR MaLR -263 127 2 1849 117 3 23 chr17 5302809 5303109 -84201444 - AluSg SINE Alu -15 295 2 936 117 0 0 chr17 5303200 5303328 -84201225 - AluJb SINE Alu -23 289 162 244 208 56 14 chr17 5303457 5303529 -84201024 - MIR SINE MIR -75 187 113 229 83 83 21 chr17 5303831 5303879 -84200674 + LTR41 LTR ERVL 711 761 -12 1031 243 10 17 chr17 5304643 5304935 -84199618 - AluSq SINE Alu -12 301 12 1185 137 55 136 chr17 5305483 5305852 -84198701 - MER4C LTR ERV1 0 473 149 5043 78 39 58 chr17 5305971 5306827 -84197726 - SVA Other Other -519 867 29 1531 123 0 25 chr17 5306831 5307066 -84197487 - AluSq SINE Alu 0 313 85 2231 115 0 3 chr17 5307120 5307433 -84197120 - AluSq SINE Alu -1 312 1 2296 66 3 10 chr17 5307442 5307745 -84196808 - AluSp SINE Alu -12 301 1 1288 206 0 23 chr17 5307828 5308129 -84196424 - AluSg SINE Alu -16 294 1 822 169 5 77 chr17 5308154 5308349 -84196204 - LTR62 LTR ERVK -538 181 1 826 269 90 35 chr17 5308792 5309160 -84195393 - MLT1H1 LTR MaLR 0 555 168 1460 88 5 5 chr17 5309163 5309367 -84195186 - AluSx SINE Alu -16 294 91 748 209 32 41 chr17 5309367 5309587 -84194966 - LTR7 LTR ERV1 0 450 233 756 161 0 0 chr17 5311732 5311850 -84192703 + AluSg/x SINE Alu 177 294 -16 823 214 28 6 chr17 5311850 5311969 -84192584 + AluJo SINE Alu 1 127 -185 509 0 16 0 chr17 5311969 5312030 -84192523 + (CA)n Simple_repeat Simple_repeat 2 63 0 823 214 28 6 chr17 5312030 5312092 -84192461 + AluJo SINE Alu 127 186 -126 729 123 9 0 chr17 5312111 5312217 -84192336 - AluSx SINE Alu -202 111 5 2184 86 3 16 chr17 5312602 5312906 -84191647 + AluSg SINE Alu 5 304 -6 968 177 0 0 chr17 5312909 5313067 -84191486 + AluJb SINE Alu 140 297 -15 1719 175 0 7 chr17 5313073 5313370 -84191183 + AluJo SINE Alu 5 299 -13 396 295 18 9 chr17 5313439 5313551 -84191002 + L2 LINE L2 3159 3271 -42 2188 113 0 6 chr17 5314100 5314411 -84190142 - AluSx SINE Alu -2 310 2 674 173 17 12 chr17 5314533 5314706 -84189847 + CT-rich Low_complexity Low_complexity 5 178 0 627 163 10 0 chr17 5314745 5314843 -84189710 - AluJ/FLAM SINE Alu -212 100 2 1967 202 24 71 chr17 5315312 5315363 -84189190 + LTR31 LTR ERV1 1 53 -566 1607 164 38 11 chr17 5315363 5315488 -84189065 + AluJo SINE Alu 3 123 -189 270 0 0 0 chr17 5315488 5315518 -84189035 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1607 164 38 11 chr17 5315518 5315679 -84188874 + AluJo SINE Alu 123 297 -15 1967 202 24 71 chr17 5315679 5315803 -84188750 + LTR31 LTR ERV1 53 181 -438 2327 104 10 10 chr17 5315803 5316112 -84188441 + AluSq SINE Alu 1 309 -4 1967 202 24 71 chr17 5316112 5316503 -84188050 + LTR31 LTR ERV1 181 553 -66 2303 55 0 35 chr17 5316503 5316814 -84187739 + AluY SINE Alu 1 300 -11 1967 202 24 71 chr17 5316814 5316862 -84187691 + LTR31 LTR ERV1 553 602 -17 303 250 70 0 chr17 5317098 5317198 -84187355 + (CAGTG)n Simple_repeat Simple_repeat 4 110 0 2081 126 3 10 chr17 5317469 5317770 -84186783 - AluSx SINE Alu -8 304 6 2205 99 0 7 chr17 5318138 5318441 -84186112 - AluSc SINE Alu 0 301 1 2397 57 0 3 chr17 5318786 5319069 -84185484 + AluSq SINE Alu 25 306 -7 362 236 63 0 chr17 5319210 5319349 -84185204 - MIR SINE MIR -70 138 45 2275 98 0 10 chr17 5320454 5320759 -84183794 + AluSx SINE Alu 1 302 -10 302 280 131 0 chr17 5320977 5321084 -84183469 + MIR3 SINE MIR 36 156 -52 208 338 26 13 chr17 5321377 5321454 -84183099 - L2 LINE L2 -241 3031 2954 2094 121 3 19 chr17 5322161 5322475 -84182078 - AluSp SINE Alu -3 310 2 1110 219 93 7 chr17 5322803 5323082 -84181471 + MLT1D LTR MaLR 41 343 -162 1712 71 9 0 chr17 5323259 5323494 -84181059 - AluSg/x SINE Alu 0 306 70 2279 106 0 0 chr17 5323613 5323906 -84180647 + AluSg SINE Alu 17 309 -1 691 291 57 0 chr17 5323911 5324121 -84180432 + L1ME3A LINE L1 5944 6165 -5 228 35 0 0 chr17 5324595 5324624 -84179929 + (TG)n Simple_repeat Simple_repeat 2 30 0 5765 30 0 3 chr17 5324624 5325333 -84179220 - L1PA4 LINE L1 -4 6151 5445 736 71 0 0 chr17 5325333 5325428 -84179125 + L1PA5 LINE L1 6054 6152 -2 437 153 0 0 chr17 5325464 5325536 -84179017 - AluJ/FLAM SINE Alu -239 73 2 2361 105 7 0 chr17 5325545 5325851 -84178702 - AluSx SINE Alu -4 308 1 660 149 61 0 chr17 5326012 5326126 -84178427 - FLAM_C SINE Alu -17 126 6 2131 221 46 63 chr17 5326159 5326250 -84178303 + MER77 LTR ERV1 46 137 -468 2383 87 0 7 chr17 5326250 5326548 -84178005 + AluSg SINE Alu 1 296 -14 2099 140 0 3 chr17 5326558 5326858 -84177695 + AluSx SINE Alu 1 299 -13 2131 221 46 63 chr17 5326858 5327325 -84177228 + MER77 LTR ERV1 146 605 0 699 151 0 125 chr17 5327517 5327669 -84176884 + FLAM_A SINE Alu 1 133 0 2101 102 0 47 chr17 5327677 5327999 -84176554 + AluSg SINE Alu 1 307 -3 2261 95 3 7 chr17 5328007 5328302 -84176251 + AluSx SINE Alu 4 297 -15 298 264 0 0 chr17 5328667 5328739 -84175814 - MIR SINE MIR -176 86 15 227 174 22 0 chr17 5328779 5328825 -84175728 + L2 LINE L2 3224 3270 -2 2081 104 0 28 chr17 5329022 5329311 -84175242 - AluSq SINE Alu -31 282 2 2355 79 0 13 chr17 5329323 5329626 -84174927 - AluY SINE Alu -12 299 1 2330 106 0 3 chr17 5329901 5330204 -84174349 - AluSq SINE Alu -11 302 1 297 272 237 18 chr17 5330330 5330444 -84174109 - MIR3 SINE MIR -21 187 49 2183 106 0 32 chr17 5330782 5331094 -84173459 - AluSx SINE Alu -10 302 1 316 248 106 39 chr17 5331130 5331286 -84173267 + MIR SINE MIR 34 204 -58 2354 80 0 10 chr17 5331385 5331684 -84172869 - AluY SINE Alu -15 296 1 291 28 0 0 chr17 5331685 5331721 -84172832 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2193 101 22 0 chr17 5331721 5331998 -84172555 - AluSg SINE Alu -27 283 1 322 234 120 53 chr17 5382153 5382300 -84122253 + L1M4 LINE L1 4469 4636 -1510 1982 101 8 0 chr17 5382300 5382557 -84121996 - AluSp SINE Alu -18 295 37 322 234 120 53 chr17 5382557 5382618 -84121935 + L1M4 LINE L1 4636 4691 -1455 2441 48 35 7 chr17 5382650 5382939 -84121614 + AluY SINE Alu 1 297 -14 1859 153 0 0 chr17 5382939 5383213 -84121340 - AluSx SINE Alu -37 275 1 285 250 26 13 chr17 5383385 5383461 -84121092 - LTR67 LTR ERVL -380 177 101 1935 108 0 0 chr17 5383535 5383786 -84120767 + AluSg SINE Alu 54 304 -6 663 312 75 20 chr17 5383850 5384142 -84120411 + L2 LINE L2 1121 1428 -1886 271 222 42 0 chr17 5384170 5384242 -84120311 + L2 LINE L2 1541 1615 -1699 1938 133 3 10 chr17 5384242 5384535 -84120018 - AluSg SINE Alu -19 291 1 414 140 0 0 chr17 5384573 5384630 -84119923 - AluS SINE Alu -260 58 2 637 237 59 0 chr17 5384630 5384782 -84119771 + MER20 DNA MER1_type 54 214 -5 501 281 6 18 chr17 5385172 5385336 -84119217 + AluSq SINE Alu 147 308 -5 2424 96 0 0 chr17 5385339 5385642 -84118911 + AluSc SINE Alu 3 305 -4 2289 216 111 27 chr17 5385644 5385806 -84118747 + L1M4 LINE L1 4462 4609 -1537 2045 133 7 0 chr17 5385806 5386099 -84118454 - AluSq SINE Alu -18 295 1 2289 216 111 27 chr17 5386099 5386574 -84117979 + L1M4 LINE L1 4609 5174 -972 2284 116 6 0 chr17 5386574 5386885 -84117668 + AluSp SINE Alu 1 313 0 2289 216 111 27 chr17 5386885 5386997 -84117556 + L1M4 LINE L1 5174 5275 -871 250 217 103 69 chr17 5387099 5387274 -84117279 + Charlie7 DNA MER1_type 508 688 -1924 1356 136 148 38 chr17 5387417 5387653 -84116900 - AluJo SINE Alu -17 295 34 254 234 0 0 chr17 5387669 5387716 -84116837 + L2 LINE L2 3255 3301 -12 2346 99 0 3 chr17 5387718 5388021 -84116532 + AluSq SINE Alu 1 302 -11 2452 154 20 18 chr17 5388021 5388476 -84116077 + LTR62 LTR ERVK 262 717 -2 459 252 25 0 chr17 5388650 5388769 -84115784 - AluSq/x SINE Alu -190 123 2 1523 176 20 36 chr17 5388845 5389146 -84115407 - AluSx SINE Alu -16 296 1 330 257 37 37 chr17 5389267 5389376 -84115177 - MIR SINE MIR 0 262 154 2036 128 44 3 chr17 5389421 5389719 -84114834 - AluSg SINE Alu 0 310 1 2212 119 7 3 chr17 5389729 5390031 -84114522 - AluSx SINE Alu -9 303 1 2397 69 0 3 chr17 5390109 5390400 -84114153 + AluY SINE Alu 4 293 -18 197 302 32 0 chr17 5390757 5390820 -84113733 + L2 LINE L2 2714 2778 -536 2308 89 27 0 chr17 5390826 5391118 -84113435 + AluSx SINE Alu 1 300 -12 2269 106 3 7 chr17 5392525 5392827 -84111726 - AluSx SINE Alu -2 310 10 944 147 4 113 chr17 5392897 5393128 -84111425 + L1 LINE L1 4827 5032 -1114 1004 105 0 7 chr17 5393128 5393271 -84111282 + AluSp/q SINE Alu 168 309 -4 321 254 28 70 chr17 5393435 5393577 -84110976 + MER117 DNA MER1_type 5 140 -57 505 169 0 0 chr17 5394047 5394130 -84110423 - Tigger5 DNA MER2_type 0 2323 2241 2051 117 25 0 chr17 5394130 5394412 -84110141 + AluSx SINE Alu 1 289 -23 86 103 0 0 chr17 5394619 5394891 -84109662 + GC_rich Low_complexity Low_complexity 1 272 0 2067 115 0 16 chr17 5394971 5395307 -84109246 + AluY SINE Alu 3 311 0 407 319 32 13 chr17 5395330 5395487 -84109066 - Charlie2 DNA MER1_type -2622 160 1 1485 99 36 14 chr17 5395561 5395784 -84108769 + AluY SINE Alu 84 311 0 611 199 12 53 chr17 5396260 5396431 -84108122 + Charlie2 DNA MER1_type 2692 2855 -7 2266 107 3 0 chr17 5396813 5397112 -84107441 - AluSx SINE Alu -12 300 1 183 348 162 29 chr17 5397113 5397317 -84107236 + L2 LINE L2 3029 3259 -13 1629 131 91 36 chr17 5397355 5397630 -84106923 - AluJb SINE Alu -22 290 1 314 286 13 0 chr17 5397658 5397735 -84106818 + L2 LINE L2 3186 3263 -9 199 319 35 44 chr17 5398919 5399032 -84105521 - L2 LINE L2 -219 3053 2942 213 319 42 0 chr17 5399039 5399111 -84105442 + L2 LINE L2 2883 2957 -356 2390 81 3 3 chr17 5399129 5399437 -84105116 - AluSp SINE Alu -5 308 1 2368 81 0 16 chr17 5399443 5399750 -84104803 - AluSq SINE Alu -11 302 1 323 341 99 41 chr17 5400109 5400232 -84104321 + L2 LINE L2 1019 1134 -2180 2180 108 3 17 chr17 5400232 5400366 -84104187 + AluSg SINE Alu 1 135 -175 2427 101 0 0 chr17 5400366 5400673 -84103880 + AluSg SINE Alu 1 307 -3 2180 108 3 17 chr17 5400673 5400835 -84103718 + AluSg SINE Alu 135 293 -17 323 341 99 41 chr17 5400835 5401025 -84103528 + L2 LINE L2 1134 1350 -1964 556 185 73 101 chr17 5401205 5401223 -84103330 - MER5B DNA MER1_type -2 176 159 8564 52 2 0 chr17 5401223 5402190 -84102363 + LTR5 LTR ERVK 1 969 0 556 185 73 101 chr17 5402190 5402349 -84102204 - MER5B DNA MER1_type -19 159 4 1041 137 15 93 chr17 5402360 5402501 -84102052 + MER5A DNA MER1_type 1 123 -66 2197 112 3 40 chr17 5402501 5402824 -84101729 - AluSx SINE Alu -1 311 1 1041 137 15 93 chr17 5402824 5402887 -84101666 + MER5A DNA MER1_type 123 189 0 2420 99 0 0 chr17 5402990 5403303 -84101250 - AluSp SINE Alu 0 313 1 2149 124 0 0 chr17 5403704 5404026 -84100527 - AluSp SINE Alu 0 324 3 449 222 0 11 chr17 5404438 5404528 -84100025 + Tigger5 DNA MER2_type 1 89 -2234 1300 111 12 0 chr17 5404528 5404700 -84099853 - AluSg/x SINE Alu -1 311 138 885 73 0 0 chr17 5404731 5404841 -84099712 + AluSq/x SINE Alu 1 110 -203 258 95 0 0 chr17 5404841 5404883 -84099670 + (T)n Simple_repeat Simple_repeat 1 42 0 1051 102 0 0 chr17 5405314 5405442 -84099111 + AluSq/x SINE Alu 6 133 -180 2362 94 0 0 chr17 5405445 5405754 -84098799 + AluY SINE Alu 1 309 -2 244 256 44 22 chr17 5405755 5405845 -84098708 + Charlie2 DNA MER1_type 219 310 -2472 1564 174 4 18 chr17 5405918 5406193 -84098360 - AluJb SINE Alu -24 288 18 275 246 111 40 chr17 5406201 5406327 -84098226 + Charlie2 DNA MER1_type 1931 2065 -797 2075 109 46 0 chr17 5406656 5406941 -84097612 + AluSp SINE Alu 1 298 -15 645 259 24 24 chr17 5406951 5407117 -84097436 - MER5A DNA MER1_type 0 189 24 2234 100 4 0 chr17 5407227 5407546 -84097007 - AluSx SINE Alu 0 320 1 2888 10 0 0 chr17 5407648 5407955 -84096598 - AluYa5 SINE Alu -4 307 1 2105 121 0 23 chr17 5408422 5408727 -84095826 - AluSx SINE Alu -14 298 1 2463 84 0 0 chr17 5408750 5409048 -84095505 - AluY SINE Alu -13 298 1 2522 77 0 3 chr17 5410096 5410408 -84094145 - AluY SINE Alu 0 311 1 2034 143 10 0 chr17 5410458 5410758 -84093795 - AluJo SINE Alu -9 303 1 656 251 157 61 chr17 5410891 5411350 -84093203 - LTR33 LTR ERVL -9 512 10 654 330 76 45 chr17 5411390 5411836 -84092717 + L2 LINE L2 2183 2642 -672 320 78 0 0 chr17 5411862 5411913 -84092640 - AluY SINE Alu -169 132 82 1582 107 9 0 chr17 5411913 5412128 -84092425 - AluY SINE Alu -94 217 1 907 264 73 58 chr17 5412497 5412993 -84091560 - MLT1J LTR MaLR -8 503 1 1693 182 0 14 chr17 5413052 5413338 -84091215 - AluJo SINE Alu -30 282 1 294 283 55 7 chr17 5413666 5413811 -84090742 + L1M4 LINE L1 4776 4927 -1219 2043 141 7 0 chr17 5414053 5414344 -84090209 - AluSx SINE Alu -14 298 6 802 117 23 8 chr17 5414625 5414753 -84089800 - AluJb SINE Alu -7 305 176 926 154 7 20 chr17 5416556 5416705 -84087848 - FRAM SINE Alu -12 164 18 755 205 0 0 chr17 5417614 5417731 -84086822 - FLAM_C SINE Alu -25 118 2 533 287 105 17 chr17 5417836 5418017 -84086536 + MIR3 SINE MIR 9 205 -3 564 222 171 64 chr17 5418074 5418169 -84086384 - MIR SINE MIR -2 260 177 486 167 49 0 chr17 5418169 5418271 -84086282 - L1MB8 LINE L1 0 6178 6072 564 222 171 64 chr17 5418271 5418409 -84086144 - MIR SINE MIR -85 177 2 2620 48 0 0 chr17 5421586 5421898 -84082655 + AluSx SINE Alu 1 312 0 2232 83 0 16 chr17 5421904 5422218 -84082335 + AluSg SINE Alu 1 309 -1 2351 91 0 0 chr17 5422375 5422682 -84081871 + AluSx SINE Alu 3 309 -3 2040 87 45 3 chr17 5423413 5423701 -84080852 + AluSp SINE Alu 2 301 -12 307 359 65 52 chr17 5423983 5424367 -84080186 + L2 LINE L2 2864 3252 -20 700 244 144 0 chr17 5424371 5424572 -84079981 - L1MEc LINE L1 -5955 441 212 1284 111 26 5 chr17 5424580 5424770 -84079783 + AluJb SINE Alu 1 194 -118 225 0 0 0 chr17 5424809 5424834 -84079719 + (A)n Simple_repeat Simple_repeat 1 25 0 598 216 74 45 chr17 5424834 5425010 -84079543 - L1MEc LINE L1 -6177 219 39 1800 170 7 0 chr17 5425018 5425318 -84079235 - AluJb SINE Alu -10 302 1 2417 77 0 3 chr17 5425486 5425796 -84078757 - AluSq SINE Alu 0 313 5 27 0 0 0 chr17 5425806 5425833 -84078720 + AT_rich Low_complexity Low_complexity 1 27 0 413 312 57 6 chr17 5426006 5426163 -84078390 + MIR SINE MIR 24 188 -74 210 355 157 29 chr17 5426511 5426855 -84077698 + L2 LINE L2 2498 2885 -429 348 173 298 19 chr17 5426866 5426970 -84077583 - FLAM_A SINE Alu 0 133 1 622 242 124 27 chr17 5426971 5427157 -84077396 + MER63A DNA MER1_type 7 210 0 586 178 29 106 chr17 5427222 5427293 -84077260 + LTR41 LTR ERVL 580 655 -118 1808 166 0 7 chr17 5427293 5427583 -84076970 - AluJb SINE Alu -24 288 1 1971 116 0 33 chr17 5427593 5427894 -84076659 - AluSx SINE Alu -21 291 1 586 178 29 106 chr17 5427894 5428019 -84076534 + LTR41 LTR ERVL 664 771 -2 844 163 0 15 chr17 5428080 5428215 -84076338 + FLAM_C SINE Alu 1 133 0 2289 61 14 3 chr17 5428315 5428612 -84075941 + AluY SINE Alu 1 300 -11 2118 110 0 3 chr17 5428624 5428924 -84075629 + AluSc SINE Alu 1 299 -10 336 301 17 80 chr17 5429990 5430166 -84074387 + L1ME4a LINE L1 5957 6121 0 2521 61 0 0 chr17 5430491 5430801 -84073752 + AluY SINE Alu 2 311 0 2109 96 21 0 chr17 5430927 5431218 -84073335 - AluSx SINE Alu -15 297 1 305 252 47 65 chr17 5431344 5431451 -84073102 + L1MDa LINE L1 1984 2088 -4452 244 208 56 14 chr17 5432089 5432161 -84072392 - MIR SINE MIR -75 187 113 229 83 83 21 chr17 5432462 5432510 -84072043 + LTR41 LTR ERVL 711 761 -12 2107 119 0 7 chr17 5433273 5433575 -84070978 - AluSx SINE Alu -12 300 1 1252 154 32 104 chr17 5434114 5434722 -84069831 - MER4C LTR ERV1 0 465 1 405 473 64 32 chr17 5435829 5436110 -84068443 - AluSg SINE Alu -1 309 20 21 0 0 0 chr17 5436117 5436138 -84068415 + AT_rich Low_complexity Low_complexity 1 21 0 1411 108 28 9 chr17 5436146 5436358 -84068195 + AluSg/x SINE Alu 92 307 -5 410 315 71 25 chr17 5436627 5436824 -84067729 - MIR SINE MIR 0 262 57 2134 111 3 0 chr17 5437922 5438229 -84066324 + AluSx SINE Alu 1 308 -4 757 171 142 0 chr17 5438246 5438422 -84066131 + MLT1A2 LTR MaLR 174 374 0 2027 101 3 0 chr17 5438644 5438930 -84065623 + AluSx SINE Alu 1 287 -25 189 0 0 0 chr17 5438930 5438951 -84065602 + (CA)n Simple_repeat Simple_repeat 2 22 0 200 259 25 0 chr17 5439632 5439713 -84064840 + (CCCCG)n Simple_repeat Simple_repeat 4 86 0 432 324 103 5 chr17 5440064 5440268 -84064285 + MIR SINE MIR 31 254 -8 239 274 128 26 chr17 5440254 5440371 -84064182 - L2 LINE L2 -301 3012 2884 * 292 304 25 44 chr17 5440485 5440612 -84063941 + L2 LINE L2 3159 3284 -29 2291 78 0 0 chr17 5440612 5440907 -84063646 + AluSg SINE Alu 3 297 -13 292 304 25 44 chr17 5440907 5440937 -84063616 + L2 LINE L2 3284 3313 0 501 265 107 20 chr17 5440958 5441154 -84063399 - L2 LINE L2 -515 2799 2587 1559 114 125 37 chr17 5441187 5441459 -84063094 + AluSg SINE Alu 1 296 -14 2450 222 65 36 chr17 5441566 5442259 -84062294 - LTR28 LTR ERV1 0 1020 308 350 176 24 35 chr17 5442228 5442313 -84062240 - LTR1 LTR ERV1 -595 190 107 * 399 244 267 0 chr17 5442324 5442459 -84062094 - LTR28 LTR ERV1 -842 178 8 24 0 0 0 chr17 5443082 5443106 -84061447 + AT_rich Low_complexity Low_complexity 1 24 0 311 319 104 7 chr17 5443133 5443268 -84061285 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 5443884 5443908 -84060645 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 319 259 126 21 chr17 5444239 5444382 -84060171 - MIR3 SINE MIR -7 201 44 192 346 38 53 chr17 5445200 5445596 -84058957 - L2 LINE L2 -427 2887 2498 198 71 0 0 chr17 5446760 5446788 -84057765 + (GCGTG)n Simple_repeat Simple_repeat 4 31 0 201 121 0 0 chr17 5447177 5447210 -84057343 + (CA)n Simple_repeat Simple_repeat 2 34 0 279 133 0 0 chr17 5447268 5447313 -84057240 + (CA)n Simple_repeat Simple_repeat 1 45 0 238 108 37 0 chr17 5447884 5447935 -84056618 - MLT-int LTR MaLR -1155 216 142 796 162 14 152 chr17 5447935 5448145 -84056408 + MLT1C LTR MaLR 210 467 0 3138 136 4 8 chr17 5448340 5448825 -84055728 + MER1A DNA MER1_type 47 529 0 549 68 0 0 chr17 5449024 5449098 -84055455 + (CA)n Simple_repeat Simple_repeat 2 75 0 2300 92 3 0 chr17 5449144 5449449 -84055104 - AluSp SINE Alu -7 306 1 213 204 23 11 chr17 5449999 5450087 -84054466 + CT-rich Low_complexity Low_complexity 1 89 0 210 222 0 0 chr17 5450397 5450442 -84054111 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 5450925 5450950 -84053603 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 2019 158 24 3 chr17 5451030 5451366 -84053187 + MER2 DNA MER2_type 2 344 0 257 178 10 139 chr17 5452362 5452463 -84052090 - SN5 Other centromeric -68 387 300 1305 293 43 27 chr17 5457724 5458392 -84046161 + L1MC3 LINE L1 5486 6164 -1621 464 249 60 100 chr17 5463524 5463663 -84040890 - L1MD3 LINE L1 0 7995 7852 1643 169 0 26 chr17 5463663 5463971 -84040582 + AluJo SINE Alu 1 300 -12 464 249 60 100 chr17 5463971 5464132 -84040421 - L1MD3 LINE L1 -143 7852 7707 444 173 0 37 chr17 5464326 5464407 -84040146 - AluJ/FRAM SINE Alu -15 297 220 1614 124 86 4 chr17 5464407 5464674 -84039879 + MER7A DNA MER2_type 56 342 -4 1737 142 16 50 chr17 5466289 5466425 -84038128 + AluSx SINE Alu 1 140 -172 6252 33 0 7 chr17 5466425 5467150 -84037403 + SVA Other Other 665 1384 -2 1737 142 16 50 chr17 5467150 5467330 -84037223 + AluSx SINE Alu 140 306 -6 239 222 30 30 chr17 5467594 5467736 -84036817 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 222 365 117 7 chr17 5470678 5470815 -84033738 - MIR3 SINE MIR -15 193 42 686 200 113 16 chr17 5471120 5471251 -84033302 + MER3 DNA MER1_type 4 160 -49 1689 202 10 0 chr17 5471251 5471558 -84032995 - AluJb SINE Alu -2 310 1 686 200 113 16 chr17 5471558 5471611 -84032942 + MER3 DNA MER1_type 160 206 -3 31 44 0 0 chr17 5472255 5472300 -84032253 + AT_rich Low_complexity Low_complexity 1 45 0 2367 122 0 0 chr17 5472501 5472813 -84031740 + AluSx SINE Alu 1 312 0 591 206 8 23 chr17 5472839 5472970 -84031583 + FAM SINE Alu 1 46 -3 355 302 147 16 chr17 5473261 5473390 -84031163 + MIR3 SINE MIR 2 147 -61 2148 115 7 0 chr17 5473393 5473672 -84030881 + AluSq SINE Alu 1 281 -32 399 21 0 0 chr17 5473672 5473720 -84030833 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1233 229 151 49 chr17 5473809 5473880 -84030673 - MLT1D LTR MaLR 0 505 443 2320 92 7 3 chr17 5473880 5474174 -84030379 - AluSc SINE Alu -14 295 1 1233 229 151 49 chr17 5474174 5474547 -84030006 - MLT1D LTR MaLR -62 443 16 1463 228 139 37 chr17 5474600 5474813 -84029740 + L1ME3A LINE L1 4399 4589 -1557 347 0 23 0 chr17 5474813 5474856 -84029697 + (TG)n Simple_repeat Simple_repeat 1 44 0 1463 228 139 37 chr17 5474856 5475338 -84029215 + L1ME3A LINE L1 4589 5165 -981 2293 106 0 17 chr17 5475338 5475639 -84028914 + AluSg SINE Alu 1 296 -14 817 262 84 42 chr17 5475655 5476102 -84028451 + L1ME3A LINE L1 5407 5899 -271 1909 169 3 0 chr17 5476102 5476397 -84028156 + AluJb SINE Alu 6 301 -11 817 262 84 42 chr17 5476397 5476457 -84028096 + L1ME3A LINE L1 5899 5955 -215 282 297 34 47 chr17 5476524 5476672 -84027881 + L1ME3A LINE L1 5968 6113 -57 2374 95 3 0 chr17 5476672 5476968 -84027585 - AluSp SINE Alu -16 297 1 2259 116 0 3 chr17 5477035 5477336 -84027217 - AluSg SINE Alu -10 300 1 1670 170 12 49 chr17 5478094 5478418 -84026135 - AluJo SINE Alu 0 312 1 37 52 0 0 chr17 5479104 5479162 -84025391 + AT_rich Low_complexity Low_complexity 1 58 0 2363 106 6 0 chr17 5479680 5479991 -84024562 - AluSp SINE Alu 0 313 1 2033 143 10 0 chr17 5480122 5480415 -84024138 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 5480417 5480461 -84024092 + AT_rich Low_complexity Low_complexity 1 44 -50 2302 106 0 6 chr17 5480461 5480773 -84023780 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 5480773 5480823 -84023730 + AT_rich Low_complexity Low_complexity 44 94 0 819 234 112 115 chr17 5480957 5481041 -84023512 - L2 LINE L2 -799 2515 2432 2158 95 15 0 chr17 5481041 5481314 -84023239 - AluSc SINE Alu -32 277 1 819 234 112 115 chr17 5481314 5481674 -84022879 - L2 LINE L2 -882 2432 2072 1514 155 43 0 chr17 5481682 5481960 -84022593 + AluJb SINE Alu 10 299 -13 1494 146 107 23 chr17 5482138 5482399 -84022154 + AluJo SINE Alu 30 312 0 1065 77 14 43 chr17 5482441 5482649 -84021904 - AluSc SINE Alu -15 294 2 562 170 94 9 chr17 5482689 5482795 -84021758 + MLT1B LTR MaLR 1 115 -275 1809 88 0 0 chr17 5482797 5483024 -84021529 + AluSp SINE Alu 87 313 0 1715 194 0 3 chr17 5483775 5484068 -84020485 + AluJo SINE Alu 11 302 -10 2003 128 6 16 chr17 5484314 5484627 -84019926 + AluSx SINE Alu 1 310 -2 683 135 0 45 chr17 5484709 5484820 -84019733 + AluSx SINE Alu 2 107 -205 1236 146 23 0 chr17 5484923 5485142 -84019411 + AluSx SINE Alu 85 308 -4 419 271 145 42 chr17 5485171 5485385 -84019168 + MIR SINE MIR 21 256 -6 2181 105 0 3 chr17 5485551 5485847 -84018706 + AluSx SINE Alu 1 295 -17 2285 117 0 0 chr17 5485847 5486145 -84018408 + AluSg SINE Alu 1 298 -12 2178 93 0 81 chr17 5486919 5487114 -84017439 - AluSq SINE Alu -7 306 148 2215 77 45 0 chr17 5487114 5487400 -84017153 - AluY SINE Alu -12 299 1 2178 93 0 81 chr17 5487400 5487537 -84017016 - AluSq SINE Alu -165 148 1 1994 149 0 0 chr17 5487706 5487995 -84016558 + AluJb SINE Alu 1 289 -23 2231 116 3 0 chr17 5488086 5488379 -84016174 + AluSg SINE Alu 2 295 -15 326 205 126 47 chr17 5488445 5488572 -84015981 + MLT1B LTR MaLR 2 138 -252 1492 184 0 0 chr17 5488572 5488811 -84015742 + AluJo SINE Alu 1 239 -73 539 198 0 27 chr17 5488813 5488924 -84015629 + AluJb SINE Alu 202 309 -3 268 171 26 13 chr17 5488924 5489000 -84015553 + GA-rich Low_complexity Low_complexity 1 77 0 746 199 13 0 chr17 5489163 5489319 -84015234 + MLT1B LTR MaLR 192 349 -41 236 162 0 0 chr17 5489362 5489399 -84015154 + MLT1B LTR MaLR 354 390 0 2192 76 6 51 chr17 5489460 5489775 -84014778 - AluSg SINE Alu -8 302 2 573 287 80 23 chr17 5489784 5490084 -84014469 + L1MC/D LINE L1 5479 5795 -2013 2041 129 0 17 chr17 5490096 5490391 -84014162 + AluJb SINE Alu 11 300 -12 2360 105 0 0 chr17 5490391 5490686 -84013867 + AluSp SINE Alu 1 295 -18 1289 129 0 0 chr17 5490686 5490864 -84013689 + AluSc SINE Alu 132 309 0 2371 86 0 0 chr17 5491409 5491700 -84012853 + AluSc SINE Alu 5 295 -14 622 73 0 12 chr17 5491837 5491919 -84012634 - AluJb SINE Alu -148 164 84 1988 133 25 0 chr17 5491951 5492236 -84012317 + AluSx SINE Alu 1 292 -20 26 50 0 0 chr17 5492237 5492277 -84012276 + AT_rich Low_complexity Low_complexity 1 40 0 2289 89 20 0 chr17 5492330 5492622 -84011931 + AluSp SINE Alu 1 298 -15 2354 89 3 13 chr17 5492624 5492980 -84011573 + AluY SINE Alu 1 353 0 727 85 0 19 chr17 5493320 5493426 -84011127 - AluSp/q SINE Alu -12 301 198 2412 93 0 0 chr17 5493602 5493913 -84010640 - AluSq SINE Alu -2 311 1 291 320 27 7 chr17 5493953 5494103 -84010450 + L1ME LINE L1 5517 5669 -452 1857 173 7 0 chr17 5494271 5494566 -84009987 - AluJb SINE Alu -15 297 1 346 237 12 31 chr17 5494588 5494731 -84009822 - L1MC/D LINE L1 -719 5455 5314 2261 120 3 3 chr17 5494785 5495094 -84009459 - AluSp SINE Alu -2 311 3 310 186 0 0 chr17 5495174 5495233 -84009320 - L1MB5 LINE L1 -214 5960 5902 2185 101 50 0 chr17 5495535 5495832 -84008721 - AluSq SINE Alu -1 312 1 515 152 101 0 chr17 5496380 5496479 -84008074 - AluJo/FRAM SINE Alu -1 311 203 1563 142 24 12 chr17 5496479 5496604 -84007949 - AluJb SINE Alu -53 259 137 2322 104 0 0 chr17 5496604 5496902 -84007651 - AluSc SINE Alu -10 299 2 1563 142 24 12 chr17 5496902 5497030 -84007523 - AluJb SINE Alu -175 137 3 2385 78 0 0 chr17 5497190 5497510 -84007043 + AluSq SINE Alu 1 320 0 2327 106 3 0 chr17 5497558 5497869 -84006684 + AluSq SINE Alu 1 312 -1 288 0 0 0 chr17 5498370 5498402 -84006151 + (CA)n Simple_repeat Simple_repeat 2 33 0 2018 139 10 0 chr17 5498428 5498716 -84005837 + AluJo SINE Alu 1 291 -21 259 25 50 0 chr17 5498725 5498765 -84005788 + (TTTTA)n Simple_repeat Simple_repeat 1 42 0 2279 64 0 7 chr17 5498765 5499046 -84005507 - AluY SINE Alu -32 279 1 2145 110 0 0 chr17 5499251 5499532 -84005021 - AluSg SINE Alu -19 291 11 530 273 127 0 chr17 5499567 5499732 -84004821 - MIR SINE MIR -6 256 71 2288 94 3 13 chr17 5499806 5500113 -84004440 + AluSx SINE Alu 1 304 -8 2229 114 3 13 chr17 5500293 5500600 -84003953 - AluSx SINE Alu -8 304 1 253 314 49 10 chr17 5500829 5500931 -84003622 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 5501050 5501153 -84003400 + MIR SINE MIR 27 138 -70 1745 166 10 30 chr17 5501399 5501701 -84002852 + AluJo SINE Alu 1 296 -16 2416 93 3 3 chr17 5501704 5502017 -84002536 + AluSp SINE Alu 1 313 0 202 313 113 45 chr17 5502024 5502289 -84002264 - L2 LINE L2 -160 3112 2830 2427 100 0 0 chr17 5502410 5502711 -84001842 + AluSx SINE Alu 1 301 -11 229 245 20 0 chr17 5502713 5502762 -84001791 + MIR3 SINE MIR 136 185 -23 1987 93 58 34 chr17 5503042 5503333 -84001220 + AluSp SINE Alu 2 299 -14 1645 164 42 18 chr17 5503838 5503962 -84000591 + AluJo SINE Alu 1 120 -182 2062 130 3 29 chr17 5503962 5504099 -84000454 + AluSx SINE Alu 1 140 -172 2296 92 0 4 chr17 5504099 5504424 -84000129 + AluSq SINE Alu 5 328 0 2062 130 3 29 chr17 5504424 5504616 -83999937 + AluSx SINE Alu 140 312 0 1645 164 42 18 chr17 5504616 5504777 -83999776 + AluJo SINE Alu 120 293 -9 2579 58 0 0 chr17 5504779 5505074 -83999479 + AluY SINE Alu 1 295 -16 1932 172 0 0 chr17 5505409 5505706 -83998847 + AluJo SINE Alu 10 306 -6 2137 92 4 0 chr17 5506102 5506374 -83998179 + AluSx SINE Alu 1 273 -39 254 308 33 33 chr17 5506444 5506535 -83998018 + MIR SINE MIR 17 107 -155 743 244 0 12 chr17 5506535 5506699 -83997854 - FRAM SINE Alu -14 162 1 2569 52 0 7 chr17 5506725 5507030 -83997523 + AluY SINE Alu 1 303 -8 361 302 87 8 chr17 5507106 5507232 -83997321 - L2 LINE L2 -1 3271 3136 1143 157 0 64 chr17 5507232 5507406 -83997147 - MER58B DNA MER1_type -2086 334 177 2183 100 3 23 chr17 5507406 5507707 -83996846 - AluSx SINE Alu -17 295 1 1143 157 0 64 chr17 5507707 5507767 -83996786 - MER58B DNA MER1_type -2243 177 115 849 175 13 7 chr17 5507769 5507923 -83996630 - AluJb SINE Alu 0 312 158 895 199 55 0 chr17 5507949 5508130 -83996423 + AluJo SINE Alu 121 311 -1 247 264 0 0 chr17 5508131 5508184 -83996369 - MER58B DNA MER1_type -254 87 35 2532 68 0 3 chr17 5508235 5508544 -83996009 + AluSx SINE Alu 1 308 -4 2150 86 59 3 chr17 5508617 5508907 -83995646 + AluSq SINE Alu 1 306 -7 1243 187 19 100 chr17 5508934 5509244 -83995309 + AluJb SINE Alu 2 286 -16 1878 135 0 10 chr17 5509645 5509933 -83994620 - AluSq SINE Alu -28 285 1 2302 58 4 7 chr17 5512508 5512784 -83991769 - AluSg SINE Alu -33 277 3 274 213 52 29 chr17 5513142 5513278 -83991275 + (CCCCG)n Simple_repeat Simple_repeat 5 143 0 201 74 0 0 chr17 5513475 5513502 -83991051 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 2289 91 0 0 chr17 5513502 5513778 -83990775 - AluSg SINE Alu -28 282 4 518 228 179 19 chr17 5513879 5514041 -83990512 - MIR SINE MIR -44 218 31 1684 186 23 3 chr17 5514135 5514256 -83990297 + AluJo SINE Alu 1 118 -194 189 0 0 0 chr17 5514256 5514277 -83990276 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1684 186 23 3 chr17 5514277 5514461 -83990092 + AluJo SINE Alu 118 312 0 2356 82 23 3 chr17 5514655 5514960 -83989593 - AluSx SINE Alu -1 311 1 2306 93 0 0 chr17 5515533 5515851 -83988702 + AluSc SINE Alu 1 318 0 1806 178 3 13 chr17 5515864 5516167 -83988386 + AluJb SINE Alu 13 312 0 2332 113 0 0 chr17 5516173 5516473 -83988080 + AluSq SINE Alu 1 300 -13 1628 146 103 11 chr17 5516981 5517262 -83987291 - AluJo SINE Alu -5 307 1 436 249 45 119 chr17 5517315 5517400 -83987153 + MIR SINE MIR 47 137 -125 710 197 31 0 chr17 5517400 5517527 -83987026 + FLAM_A SINE Alu 1 131 -2 2231 105 0 3 chr17 5517529 5517815 -83986738 + AluSx SINE Alu 1 314 0 186 35 69 0 chr17 5517815 5517844 -83986709 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 436 249 45 119 chr17 5517844 5517931 -83986622 + MIR SINE MIR 138 210 -52 808 159 0 51 chr17 5518015 5518153 -83986400 - FLAM_C SINE Alu -12 131 1 1697 153 34 3 chr17 5518197 5518491 -83986062 - AluJb SINE Alu -9 303 1 2143 82 0 23 chr17 5519123 5519427 -83985126 - AluY SINE Alu -14 297 1 2209 113 0 0 chr17 5520001 5520310 -83984243 + AluSq SINE Alu 1 309 -4 303 124 101 34 chr17 5520310 5520366 -83984187 - LTR37A LTR ERV1 -8 418 352 1499 116 0 0 chr17 5520366 5520573 -83983980 + AluSg/x SINE Alu 85 291 -21 303 124 101 34 chr17 5520573 5520605 -83983948 - LTR37A LTR ERV1 -74 352 324 347 107 0 0 chr17 5520611 5520667 -83983886 + Alu SINE Alu 247 302 0 686 193 33 82 chr17 5520673 5520744 -83983809 - LTR37A LTR ERV1 -111 315 242 4423 131 68 30 chr17 5520744 5520913 -83983640 + LTR39 LTR ERV1 1 162 -621 1998 111 0 20 chr17 5520913 5521244 -83983309 + AluSx SINE Alu 1 312 0 4423 131 68 30 chr17 5521244 5521659 -83982894 + LTR39 LTR ERV1 162 622 -161 2398 81 0 0 chr17 5521659 5521967 -83982586 + AluSx SINE Alu 1 308 -4 4423 131 68 30 chr17 5521967 5522136 -83982417 + LTR39 LTR ERV1 622 783 0 686 193 33 82 chr17 5522136 5522307 -83982246 - LTR37A LTR ERV1 -184 242 85 3184 123 35 0 chr17 5522323 5522785 -83981768 + MER1A DNA MER1_type 37 514 -15 1969 87 21 24 chr17 5522908 5523196 -83981357 - AluSc SINE Alu -14 295 9 897 169 38 0 chr17 5523220 5523380 -83981173 - FRAM SINE Alu 0 166 1 2368 57 0 10 chr17 5523909 5524208 -83980345 + AluSg SINE Alu 4 299 -11 2580 162 19 71 chr17 5524432 5524461 -83980092 + L1MB2 LINE L1 5446 5475 -696 222 37 0 0 chr17 5524461 5524488 -83980065 + (CA)n Simple_repeat Simple_repeat 2 28 0 2580 162 19 71 chr17 5524488 5524824 -83979729 + L1MB2 LINE L1 5475 5827 -344 2222 91 0 0 chr17 5524824 5525120 -83979433 + AluSx SINE Alu 1 296 -16 2580 162 19 71 chr17 5525120 5525243 -83979310 + L1MB2 LINE L1 5827 5901 -270 2272 96 0 0 chr17 5525243 5525536 -83979017 + AluSx SINE Alu 3 295 -17 2580 162 19 71 chr17 5525536 5525633 -83978920 + L1MB2 LINE L1 5901 6002 -169 22 70 0 0 chr17 5525692 5525735 -83978818 + AT_rich Low_complexity Low_complexity 1 43 0 1452 139 7 85 chr17 5525735 5525785 -83978768 + Tigger2 DNA MER2_type 2446 2498 -220 2107 88 12 34 chr17 5525785 5526105 -83978448 - AluSp SINE Alu 0 313 1 2029 133 3 0 chr17 5526105 5526406 -83978147 - AluSx SINE Alu -10 302 1 1452 139 7 85 chr17 5526406 5526649 -83977904 + Tigger2 DNA MER2_type 2496 2717 -1 194 200 160 20 chr17 5526667 5526717 -83977836 + L2 LINE L2 3024 3080 -233 697 239 133 70 chr17 5526717 5527007 -83977546 + L1MEc LINE L1 805 1140 -5256 2263 91 7 0 chr17 5527007 5527316 -83977237 + AluSp SINE Alu 1 311 -2 697 239 133 70 chr17 5527316 5527523 -83977030 + L1MEc LINE L1 1140 1333 -5063 2025 128 3 0 chr17 5527863 5528161 -83976392 + AluSx SINE Alu 1 299 -13 2352 87 3 0 chr17 5528218 5528529 -83976024 - AluSx SINE Alu 0 312 1 948 208 16 0 chr17 5528879 5529000 -83975553 + AluJo SINE Alu 1 127 -185 365 0 22 0 chr17 5529000 5529045 -83975508 + (CA)n Simple_repeat Simple_repeat 2 47 0 948 208 16 0 chr17 5529045 5529106 -83975447 + AluJo SINE Alu 127 186 -126 805 93 0 0 chr17 5529124 5529231 -83975322 - AluSq/x SINE Alu -202 111 5 2129 87 7 13 chr17 5529616 5529915 -83974638 + AluSg SINE Alu 5 301 -9 945 186 0 0 chr17 5529917 5530078 -83974475 + AluJb SINE Alu 136 296 -16 1701 179 0 3 chr17 5530084 5530380 -83974173 + AluJo SINE Alu 5 299 -13 466 315 55 0 chr17 5530449 5530595 -83973958 + L2 LINE L2 3159 3312 -1 2321 90 0 7 chr17 5531102 5531412 -83973141 - AluSx SINE Alu -3 309 2 674 173 17 12 chr17 5531534 5531707 -83972846 + CT-rich Low_complexity Low_complexity 5 178 0 615 163 10 0 chr17 5531745 5531843 -83972710 - AluJ/FLAM SINE Alu -212 100 2 1609 161 39 7 chr17 5532358 5532483 -83972070 + AluJo SINE Alu 3 123 -189 270 0 0 0 chr17 5532483 5532513 -83972040 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1609 161 39 7 chr17 5532513 5532672 -83971881 + AluJo SINE Alu 123 296 -16 2167 198 24 67 chr17 5532680 5532795 -83971758 + LTR31 LTR ERV1 76 194 -425 2198 100 10 10 chr17 5532795 5533104 -83971449 + AluSq SINE Alu 1 309 -4 2167 198 24 67 chr17 5533104 5533490 -83971063 + LTR31 LTR ERV1 194 553 -66 2449 40 3 7 chr17 5533490 5533790 -83970763 + AluY SINE Alu 1 299 -12 2167 198 24 67 chr17 5533790 5533838 -83970715 + LTR31 LTR ERV1 553 602 -17 254 256 70 0 chr17 5534071 5534157 -83970396 + (CAGTG)n Simple_repeat Simple_repeat 4 95 0 1959 127 3 7 chr17 5534423 5534723 -83969830 - AluSx SINE Alu -8 304 6 2129 112 0 0 chr17 5535091 5535387 -83969166 - AluSc SINE Alu -13 296 1 2282 57 0 0 chr17 5535729 5536011 -83968542 + AluSq SINE Alu 25 306 -7 386 224 66 3 chr17 5536152 5536291 -83968262 - MIR SINE MIR -70 138 45 2043 109 0 0 chr17 5537393 5537701 -83966852 + AluSx SINE Alu 1 308 0 2117 108 17 0 chr17 5537724 5538020 -83966533 + AluSx SINE Alu 1 301 -11 280 252 49 119 chr17 5538359 5538455 -83966098 - MIR SINE MIR -110 152 51 2135 91 0 27 chr17 5538455 5538627 -83965926 - AluSx SINE Alu -12 300 125 228 35 0 0 chr17 5538627 5538656 -83965897 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2143 87 0 14 chr17 5538656 5538943 -83965610 - AluY SINE Alu -28 283 1 2135 91 0 27 chr17 5538943 5539067 -83965486 - AluSx SINE Alu -185 127 11 280 252 49 119 chr17 5539067 5539113 -83965440 - MIR SINE MIR -211 51 20 1224 125 0 0 chr17 5539164 5539340 -83965213 + AluSg/x SINE Alu 130 305 -5 2020 125 0 13 chr17 5539997 5540302 -83964251 - AluSx SINE Alu -11 301 1 560 306 151 39 chr17 5540380 5540871 -83963682 - L3 LINE CR1 -65 1512 967 2179 78 7 0 chr17 5540893 5541187 -83963366 - AluY SINE Alu -15 296 1 256 146 0 0 chr17 5541187 5541228 -83963325 - L1ME LINE L1 -342 5828 5788 1164 90 0 0 chr17 5541235 5541390 -83963163 - AluY SINE Alu -18 293 139 275 272 87 0 chr17 5541412 5541504 -83963049 - L1ME LINE L1 -402 5768 5669 265 210 51 53 chr17 5541578 5541672 -83962881 - L1ME LINE L1 -423 5698 5606 1877 102 58 10 chr17 5541876 5542171 -83962382 - AluSx SINE Alu -3 309 1 1001 241 86 80 chr17 5542405 5542484 -83962069 - MER115 DNA AcHobo -2 691 614 1989 125 3 13 chr17 5542484 5542795 -83961758 + AluSx SINE Alu 5 312 0 1001 241 86 80 chr17 5542795 5543101 -83961452 - MER115 DNA AcHobo -79 614 304 2052 86 14 4 chr17 5543199 5543494 -83961059 - AluSg1 SINE Alu 0 298 1 2905 37 3 0 chr17 5543502 5543851 -83960702 - L1PA8 LINE L1 -6 6166 5817 250 278 0 0 chr17 5543932 5543986 -83960567 - MER115 DNA AcHobo -484 209 156 2313 78 0 0 chr17 5544086 5544382 -83960171 + AluSg SINE Alu 1 296 -14 201 238 313 0 chr17 5544528 5544608 -83959945 + L2 LINE L2 3205 3309 -4 305 249 96 47 chr17 5544694 5544843 -83959710 - MIR3 SINE MIR -65 143 1 249 53 0 211 chr17 5544946 5545077 -83959476 + (TCCC)n Simple_repeat Simple_repeat 1 103 0 21 114 0 0 chr17 5545463 5545568 -83958985 + GC_rich Low_complexity Low_complexity 1 105 0 180 296 170 59 chr17 5545890 5546025 -83958528 + MIR3 SINE MIR 2 151 -57 1753 157 3 3 chr17 5547336 5547635 -83956918 - AluJb SINE Alu -13 299 1 22 0 0 0 chr17 5547841 5547863 -83956690 + AT_rich Low_complexity Low_complexity 1 22 0 793 155 31 0 chr17 5548172 5548301 -83956252 - FLAM_C SINE Alu 0 133 1 592 274 47 16 chr17 5548477 5548667 -83955886 - MIR SINE MIR -30 232 37 308 302 81 53 chr17 5548690 5549056 -83955497 - L1MC/D LINE L1 -321 5800 5466 2176 97 0 0 chr17 5549083 5549373 -83955180 + AluSg SINE Alu 1 290 -20 386 270 30 20 chr17 5549381 5549481 -83955072 - L2 LINE L2 -2 3270 3170 1501 250 54 44 chr17 5549537 5550199 -83954354 - L2 LINE L2 -4 3309 2655 2218 95 0 0 chr17 5550199 5550493 -83954060 + AluSx SINE Alu 14 307 -5 1501 250 54 44 chr17 5550493 5550507 -83954046 - L2 LINE L2 -658 2655 2643 1751 144 28 11 chr17 5550507 5550791 -83953762 + AluJb SINE Alu 4 292 -20 1501 250 54 44 chr17 5550791 5551004 -83953549 - L2 LINE L2 -670 2643 2410 196 311 33 0 chr17 5551036 5551097 -83953456 - L2 LINE L2 -215 3057 2995 201 316 0 0 chr17 5551192 5551249 -83953304 - L2 LINE L2 -540 2774 2718 2097 125 3 0 chr17 5551253 5551564 -83952989 - AluSx SINE Alu 0 312 1 1888 143 0 7 chr17 5551566 5551873 -83952680 - AluSx SINE Alu -5 307 3 196 148 0 37 chr17 5551952 5552006 -83952547 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 194 91 30 0 chr17 5552031 5552064 -83952489 + CT-rich Low_complexity Low_complexity 3 36 0 310 247 134 16 chr17 5552088 5552304 -83952249 - L1MC/D LINE L1 -788 5358 5118 552 210 22 29 chr17 5552448 5552586 -83951967 - LTR41 LTR ERVL -43 730 594 2389 54 0 3 chr17 5552961 5553257 -83951296 - AluY SINE Alu -16 295 1 1338 200 3 10 chr17 5553464 5553754 -83950799 - AluSx SINE Alu -14 298 11 1959 122 0 10 chr17 5553999 5554293 -83950260 + AluSg SINE Alu 2 292 -18 25 51 0 0 chr17 5554317 5554356 -83950197 + AT_rich Low_complexity Low_complexity 1 39 0 270 296 145 48 chr17 5554370 5554495 -83950058 - L1ME4a LINE L1 -187 5934 5822 1750 138 18 7 chr17 5554495 5554778 -83949775 + AluSx SINE Alu 1 286 -26 270 296 145 48 chr17 5554778 5555129 -83949424 - L1ME4a LINE L1 -299 5822 5412 23 0 0 0 chr17 5555173 5555196 -83949357 + AT_rich Low_complexity Low_complexity 1 23 0 1895 139 17 0 chr17 5555251 5555553 -83949000 - AluSx SINE Alu -5 307 1 1408 194 20 17 chr17 5555553 5555846 -83948707 - AluJb SINE Alu -13 299 6 1985 117 10 24 chr17 5555877 5556175 -83948378 + AluSp SINE Alu 1 294 -19 1382 171 89 0 chr17 5556307 5556576 -83947977 - AluJb SINE Alu -19 293 1 22 56 0 0 chr17 5556835 5556871 -83947682 + AT_rich Low_complexity Low_complexity 1 36 0 355 234 0 0 chr17 5556953 5557017 -83947536 - MER2 DNA MER2_type 0 345 282 1597 124 54 0 chr17 5557021 5557280 -83947273 + AluSg SINE Alu 37 309 -1 999 143 0 0 chr17 5557287 5557448 -83947105 - MER2 DNA MER2_type -134 211 51 239 248 114 78 chr17 5557591 5557671 -83946882 - L1ME LINE L1 -219 5902 5826 2014 115 0 23 chr17 5557671 5557975 -83946578 + AluSx SINE Alu 1 297 -15 239 248 114 78 chr17 5557975 5558201 -83946352 - L1ME LINE L1 -295 5826 5585 329 265 82 18 chr17 5558428 5558598 -83945955 - HAL1b LINE L1 -1092 256 76 454 300 65 39 chr17 5558647 5558836 -83945717 - L1ME LINE L1 -2289 3857 3655 2085 112 10 0 chr17 5558836 5559132 -83945421 - AluSp SINE Alu -14 299 1 454 300 65 39 chr17 5559132 5559249 -83945304 - L1ME LINE L1 -2491 3655 3543 419 249 11 62 chr17 5559275 5559307 -83945246 - L1ME LINE L1 -327 5794 5762 1510 182 30 13 chr17 5559307 5559609 -83944944 - AluJb SINE Alu -5 307 1 419 249 11 62 chr17 5559609 5559753 -83944800 - L1ME LINE L1 -359 5762 5627 422 284 105 12 chr17 5560068 5560230 -83944323 + MIR SINE MIR 29 205 -57 474 189 277 14 chr17 5560267 5560415 -83944138 - MIR SINE MIR -71 191 5 298 182 268 71 chr17 5561179 5561228 -83943325 - L1MC5 LINE L1 -122 7839 7801 2465 50 0 0 chr17 5561228 5561526 -83943027 - AluY SINE Alu -13 298 1 298 182 268 71 chr17 5561526 5561674 -83942879 - L1MC5 LINE L1 -160 7801 7603 915 166 137 66 chr17 5561732 5561943 -83942610 - L1MC5 LINE L1 -1053 6908 6683 2232 97 0 0 chr17 5562291 5562599 -83941954 - AluSc SINE Alu -1 308 1 1570 180 80 43 chr17 5562771 5563144 -83941409 - L1MC3 LINE L1 -246 7539 7153 721 330 65 57 chr17 5563329 5563450 -83941103 - LTR67 LTR ERVL -9 548 429 806 184 107 6 chr17 5563450 5563618 -83940935 - MER5A DNA MER1_type -3 186 2 721 330 65 57 chr17 5563618 5564005 -83940548 - LTR67 LTR ERVL -128 429 36 180 345 0 0 chr17 5564261 5564319 -83940234 + L3 LINE CR1 563 620 -957 470 323 81 44 chr17 5564380 5564724 -83939829 + L3 LINE CR1 850 1206 -371 1944 138 0 0 chr17 5564816 5565113 -83939440 - AluSx SINE Alu -15 297 1 22 56 0 0 chr17 5565147 5565183 -83939370 + AT_rich Low_complexity Low_complexity 1 36 0 1038 168 16 0 chr17 5565215 5565400 -83939153 - AluJo SINE Alu -124 188 1 1664 188 0 0 chr17 5565804 5566114 -83938439 - AluSx SINE Alu 0 310 1 2232 102 0 3 chr17 5566324 5566628 -83937925 + AluSq SINE Alu 2 304 -9 2023 126 3 10 chr17 5566869 5567171 -83937382 + AluSq SINE Alu 1 300 -13 1023 152 92 0 chr17 5568625 5568809 -83935744 - Tigger5 DNA MER2_type -2 2321 2121 2260 98 0 0 chr17 5568917 5569213 -83935340 + AluSx SINE Alu 1 296 -16 390 112 10 71 chr17 5569402 5569500 -83935053 - Tigger5 DNA MER2_type -192 2131 2040 306 307 113 20 chr17 5569545 5569608 -83934945 - L1ME4a LINE L1 -2 6119 6063 2114 105 3 0 chr17 5569608 5569893 -83934660 + AluSx SINE Alu 1 286 -26 306 307 113 20 chr17 5569893 5569979 -83934574 - L1ME4a LINE L1 -58 6063 5956 2402 80 0 0 chr17 5570798 5571098 -83933455 - AluSx SINE Alu -12 300 1 187 280 13 40 chr17 5571766 5571841 -83932712 - L2 LINE L2 0 3272 3200 2241 86 3 16 chr17 5571940 5572253 -83932300 + AluSp SINE Alu 1 309 -4 571 211 12 62 chr17 5572376 5572537 -83932016 + MER5A DNA MER1_type 1 153 -36 464 255 235 7 chr17 5572550 5572703 -83931850 - MER5A DNA MER1_type -1 188 1 418 262 100 47 chr17 5572739 5572874 -83931679 - Charlie2 DNA MER1_type -40 2822 2696 1961 82 33 59 chr17 5572874 5573180 -83931373 - AluSg SINE Alu -12 298 1 418 262 100 47 chr17 5573180 5573365 -83931188 - Charlie2 DNA MER1_type -166 2696 2485 2225 103 0 0 chr17 5573372 5573674 -83930879 - AluSx SINE Alu -2 310 9 648 286 29 6 chr17 5573680 5573851 -83930702 - MER5A DNA MER1_type -14 175 1 25 0 0 0 chr17 5573915 5573940 -83930613 + AT_rich Low_complexity Low_complexity 1 25 0 2240 73 7 17 chr17 5574548 5574848 -83929705 - AluY SINE Alu -14 297 1 1534 116 151 12 chr17 5575210 5575469 -83929084 + AluSx SINE Alu 1 295 -17 329 276 32 8 chr17 5575534 5575657 -83928896 + L1ME3 LINE L1 6035 6160 -2 195 42 0 0 chr17 5575827 5575851 -83928702 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 2209 80 3 23 chr17 5577065 5577365 -83927188 + AluSc SINE Alu 1 294 -15 500 268 95 6 chr17 5577380 5577548 -83927005 - MER5A DNA MER1_type 0 189 7 296 321 291 0 chr17 5578398 5578563 -83925990 + MIR SINE MIR 46 258 -4 1768 169 0 7 chr17 5578609 5578904 -83925649 + AluJo SINE Alu 6 298 -14 2271 85 10 10 chr17 5578910 5579216 -83925337 + AluSx SINE Alu 1 306 -6 222 309 52 41 chr17 5580896 5580993 -83923560 - L2 LINE L2 -14 3258 3161 393 302 18 62 chr17 5581476 5581658 -83922895 - L2 LINE L2 0 3313 3141 2041 76 6 111 chr17 5581658 5582001 -83922552 - AluSp SINE Alu -6 307 1 393 302 18 62 chr17 5582001 5582043 -83922510 - L2 LINE L2 -172 3141 3099 2080 154 0 0 chr17 5582105 5582417 -83922136 + AluJb SINE Alu 1 312 0 398 277 53 71 chr17 5582513 5582695 -83921858 + MIR SINE MIR 1 178 -30 2470 45 3 16 chr17 5582783 5583095 -83921458 + AluY SINE Alu 1 308 -3 2163 105 7 7 chr17 5583463 5583759 -83920794 - AluSx SINE Alu -11 301 6 1118 74 0 0 chr17 5583835 5583970 -83920583 + AluSg SINE Alu 1 135 -175 1957 94 80 0 chr17 5583970 5584245 -83920308 + AluSx SINE Alu 1 297 -15 2257 93 7 13 chr17 5584493 5584803 -83919750 + AluSx SINE Alu 4 311 -1 2326 83 3 6 chr17 5584803 5585116 -83919437 + AluSp SINE Alu 1 313 0 654 246 129 26 chr17 5585653 5585885 -83918668 - MIR SINE MIR -3 259 4 483 277 43 5 chr17 5589208 5589396 -83915157 + L1MC4a LINE L1 5362 5556 -2252 1328 81 0 0 chr17 5589401 5589573 -83914980 + AluY SINE Alu 126 297 -14 601 257 87 52 chr17 5589583 5589628 -83914925 + L1MC4a LINE L1 5555 5597 -537 2461 38 3 0 chr17 5589628 5589919 -83914634 - AluY SINE Alu -19 292 1 601 257 87 52 chr17 5589919 5590145 -83914408 + L1MC4a LINE L1 5597 5832 -302 1995 134 3 3 chr17 5590160 5590459 -83914094 + AluSx SINE Alu 1 299 -13 2302 86 3 0 chr17 5590578 5590879 -83913674 - AluY SINE Alu -9 302 1 2009 129 3 3 chr17 5590908 5591202 -83913351 + AluSg SINE Alu 1 294 -16 203 254 15 60 chr17 5592183 5592250 -83912303 - L2 LINE L2 -1 3312 3249 194 347 0 0 chr17 5592301 5592376 -83912177 + L2 LINE L2 2971 3045 -227 467 333 41 31 chr17 5593549 5593744 -83910809 - L3 LINE CR1 -7 1570 1374 2211 89 10 0 chr17 5593750 5594041 -83910512 + AluSx SINE Alu 1 294 -18 700 156 18 0 chr17 5594051 5594160 -83910393 + AluSq/x SINE Alu 1 111 -201 2193 96 3 0 chr17 5594170 5594461 -83910092 - AluSx SINE Alu -20 292 1 1478 92 0 0 chr17 5594463 5594658 -83909895 + AluSc SINE Alu 103 297 -12 528 325 211 12 chr17 5594658 5595264 -83909289 - L3 LINE CR1 -199 1378 652 2223 98 0 31 chr17 5597039 5597357 -83907196 + AluSx SINE Alu 1 308 -4 426 296 84 28 chr17 5598025 5598204 -83906349 - MIR SINE MIR -41 221 33 488 298 136 5 chr17 5598395 5598593 -83905960 - MIR SINE MIR -35 227 4 223 333 11 11 chr17 5598708 5598798 -83905755 - MIR3 SINE MIR -116 92 3 26 50 0 0 chr17 5602329 5602369 -83902184 + GC_rich Low_complexity Low_complexity 1 40 0 227 283 7 36 chr17 5602379 5602517 -83902036 + G-rich Low_complexity Low_complexity 1 134 0 2211 75 51 0 chr17 5603691 5603986 -83900567 - AluSx SINE Alu -2 310 1 1672 151 37 27 chr17 5603986 5604283 -83900270 - AluJb SINE Alu -11 301 1 2402 86 0 3 chr17 5604425 5604738 -83899815 - AluSp SINE Alu -1 312 1 831 152 0 23 chr17 5604741 5604873 -83899680 - AluJo/FLAM SINE Alu -173 129 1 2135 105 7 0 chr17 5605168 5605462 -83899091 - AluSx SINE Alu -16 296 1 2390 89 0 0 chr17 5605572 5605876 -83898677 - AluSg SINE Alu -6 304 1 605 271 90 0 chr17 5606124 5606312 -83898241 - L2 LINE L2 0 3313 3109 2389 89 0 0 chr17 5606314 5606618 -83897935 + AluSx SINE Alu 1 304 -8 2296 65 3 3 chr17 5606618 5606908 -83897645 + AluY SINE Alu 1 290 -21 2247 94 7 0 chr17 5606908 5607206 -83897347 + AluSp SINE Alu 1 300 -13 2231 107 0 0 chr17 5607206 5607506 -83897047 + AluSq SINE Alu 1 300 -13 874 220 0 0 chr17 5607512 5607671 -83896882 + FRAM SINE Alu 1 159 -17 191 105 53 0 chr17 5607685 5607723 -83896830 + GA-rich Low_complexity Low_complexity 1 40 0 288 77 0 0 chr17 5607730 5607769 -83896784 + (GGGGA)n Simple_repeat Simple_repeat 4 42 0 2049 123 10 7 chr17 5607802 5608104 -83896449 + AluJo SINE Alu 1 303 -9 467 240 34 17 chr17 5608176 5608355 -83896198 - L1MC5 LINE L1 -36 7925 7744 905 284 251 15 chr17 5608360 5608878 -83895675 - L2 LINE L2 -618 2696 2057 957 90 298 6 chr17 5609086 5609168 -83895385 - MER30 DNA MER1_type 0 230 173 2281 89 10 0 chr17 5609168 5609472 -83895081 + AluSq SINE Alu 1 307 -6 2288 76 0 16 chr17 5609482 5609786 -83894767 - AluSq SINE Alu -14 299 1 957 90 298 6 chr17 5609786 5609870 -83894683 - MER30 DNA MER1_type -63 167 1 2291 100 0 0 chr17 5614662 5614963 -83889590 + AluSx SINE Alu 1 301 -11 428 360 7 7 chr17 5615034 5615187 -83889366 - MIR SINE MIR -21 241 89 1250 88 0 0 chr17 5615190 5615349 -83889204 - AluSp SINE Alu -21 292 134 2245 87 7 0 chr17 5615349 5615647 -83888906 - AluSg SINE Alu -10 300 1 2284 68 0 0 chr17 5616137 5616443 -83888110 + AluY SINE Alu 2 307 0 2153 124 0 0 chr17 5616502 5616801 -83887752 + AluSx SINE Alu 1 299 -13 2319 71 3 10 chr17 5616803 5617100 -83887453 + AluSq SINE Alu 3 297 -16 216 163 0 0 chr17 5620439 5620482 -83884071 + C-rich Low_complexity Low_complexity 5 47 0 2448 68 10 0 chr17 5620848 5621157 -83883396 - AluSq SINE Alu -1 312 1 539 327 125 11 chr17 5621310 5621591 -83882962 + L3 LINE CR1 1191 1503 -74 334 299 0 11 chr17 5621616 5621703 -83882850 + L2 LINE L2 3187 3272 0 384 347 18 24 chr17 5622042 5622212 -83882341 + MIR3 SINE MIR 17 185 -23 1101 178 66 5 chr17 5622318 5622515 -83882038 - MER3 DNA MER1_type 0 209 1 2128 122 0 6 chr17 5623657 5623969 -83880584 - AluSx SINE Alu -2 310 1 266 243 66 44 chr17 5623998 5624080 -83880473 - L1ME4a LINE L1 0 6121 6033 2349 90 0 0 chr17 5624080 5624379 -83880174 + AluSx SINE Alu 1 299 -13 266 243 66 44 chr17 5624379 5624432 -83880121 - L1ME4a LINE L1 -88 6033 5983 302 383 82 27 chr17 5624912 5625168 -83879385 - L1M4c LINE L1 -5180 1204 935 1990 148 7 0 chr17 5628397 5628701 -83875852 + AluSx SINE Alu 1 306 -6 1520 171 45 21 chr17 5628741 5629027 -83875526 + AluJo SINE Alu 1 293 -19 333 269 48 58 chr17 5633951 5634055 -83870498 - MIR SINE MIR -156 106 4 1667 155 10 39 chr17 5634108 5634248 -83870305 + AluJb SINE Alu 1 144 -168 2175 64 0 0 chr17 5634248 5634559 -83869994 + AluSc SINE Alu 14 324 0 1667 155 10 39 chr17 5634559 5634726 -83869827 + AluJb SINE Alu 144 300 -12 290 276 69 26 chr17 5634755 5634871 -83869682 - L2 LINE L2 -25 3288 3168 215 214 36 0 chr17 5634973 5635029 -83869524 - L2 LINE L2 -289 2983 2926 2053 94 3 14 chr17 5635050 5635173 -83869380 + AluSx SINE Alu 14 137 -175 2322 87 0 10 chr17 5635173 5635483 -83869070 + AluSp SINE Alu 1 307 -6 2053 94 3 14 chr17 5635483 5635647 -83868906 + AluSx SINE Alu 137 298 -14 2535 52 0 0 chr17 5635725 5636030 -83868523 + AluY SINE Alu 1 305 -6 460 188 47 0 chr17 5636298 5636383 -83868170 - AluJ/FLAM SINE Alu -221 91 3 2446 79 0 0 chr17 5636629 5636934 -83867619 + AluSg SINE Alu 1 305 -5 187 286 0 0 chr17 5636952 5637001 -83867552 + L2 LINE L2 3190 3238 -75 1367 165 189 0 chr17 5637021 5637275 -83867278 - AluJo SINE Alu 0 302 1 798 229 40 63 chr17 5637321 5637544 -83867009 + AluJo SINE Alu 3 220 -92 338 90 5 5 chr17 5637551 5637742 -83866811 + AluSg SINE Alu 14 301 0 1139 164 5 55 chr17 5637750 5637969 -83866584 + AluJb SINE Alu 84 291 -21 2223 103 0 3 chr17 5637971 5638271 -83866282 + AluSx SINE Alu 1 299 -13 274 323 54 31 chr17 5638334 5638424 -83866129 + L2 LINE L2 3137 3223 -49 1759 118 56 59 chr17 5638424 5638597 -83865956 + MER44D DNA MER2_type 1 173 -2318 2335 76 0 32 chr17 5638597 5638912 -83865641 - AluY SINE Alu -6 305 1 2304 84 7 0 chr17 5638913 5639210 -83865343 - AluSq SINE Alu -14 299 1 1759 118 56 59 chr17 5639210 5639373 -83865180 + MER44D DNA MER2_type 172 608 -1 274 323 54 31 chr17 5639373 5639412 -83865141 + L2 LINE L2 3223 3269 -3 2194 111 0 3 chr17 5641294 5641600 -83862953 - AluSx SINE Alu -7 305 1 817 165 15 0 chr17 5641641 5641774 -83862779 + AluJo SINE Alu 1 135 -177 1593 150 27 60 chr17 5641774 5642074 -83862479 + AluJo SINE Alu 1 290 -22 738 310 15 5 chr17 5642078 5642278 -83862275 + MIR SINE MIR 19 220 -42 2498 58 3 3 chr17 5642293 5642602 -83861951 - AluSp SINE Alu -4 309 1 1122 148 0 0 chr17 5642830 5643006 -83861547 - FRAM SINE Alu -1 175 1 591 64 86 0 chr17 5644460 5644600 -83859953 + (CAGAGA)n Simple_repeat Simple_repeat 1 152 0 476 219 64 97 chr17 5645360 5645463 -83859090 + MIR SINE MIR 25 130 -132 2153 79 59 0 chr17 5645463 5645753 -83858800 - AluSg SINE Alu -3 307 1 476 219 64 97 chr17 5645753 5645866 -83858687 + MIR SINE MIR 130 235 -27 * 1055 194 38 13 chr17 5645860 5646097 -83858456 - MIR SINE MIR -1 261 19 230 250 107 0 chr17 5646831 5646915 -83857638 + L2 LINE L2 3175 3267 -5 1990 104 7 31 chr17 5647624 5647763 -83856790 + AluSx SINE Alu 1 142 -163 2276 32 72 0 chr17 5647763 5648042 -83856511 + AluY SINE Alu 1 299 -12 1990 104 7 31 chr17 5648042 5648214 -83856339 + AluSx SINE Alu 142 305 0 258 238 33 25 chr17 5650276 5650398 -83854155 + C-rich Low_complexity Low_complexity 2 124 0 23 78 0 0 chr17 5651373 5651424 -83853129 + GC_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr17 5652374 5652410 -83852143 + GC_rich Low_complexity Low_complexity 1 36 0 193 303 131 7 chr17 5653851 5653996 -83850557 + MIR3 SINE MIR 25 187 -21 1524 187 11 0 chr17 5656369 5656647 -83847906 - AluJb SINE Alu -5 307 27 687 117 0 100 chr17 5656652 5656772 -83847781 - AluJb SINE Alu -204 108 1 1672 112 0 0 chr17 5658444 5658676 -83845877 - AluSg/x SINE Alu -5 307 76 229 62 0 0 chr17 5658676 5658708 -83845845 - Alu SINE Alu -268 32 1 400 263 76 35 chr17 5658763 5658934 -83845619 - MIR SINE MIR -17 245 68 248 286 0 16 chr17 5659161 5659224 -83845329 + GA-rich Low_complexity Low_complexity 4 65 0 1720 163 3 3 chr17 5664764 5665053 -83839500 - AluJb SINE Alu -23 289 1 2255 108 0 0 chr17 5665058 5665365 -83839188 - AluSx SINE Alu -5 307 1 337 313 43 0 chr17 5665371 5665534 -83839019 - L1ME4a LINE L1 -2 6119 5950 207 280 60 24 chr17 5666395 5666563 -83837990 + (TTGGGG)n Simple_repeat Simple_repeat 3 176 0 483 323 127 26 chr17 5668226 5668254 -83836299 + L2 LINE L2 1685 1709 -1605 2226 71 17 14 chr17 5668254 5668549 -83836004 + AluSp SINE Alu 1 296 -17 483 323 127 26 chr17 5668549 5668947 -83835606 + L2 LINE L2 1709 2154 -1160 1105 106 0 0 chr17 5668950 5669091 -83835462 - AluSq/x SINE Alu -170 142 2 852 295 70 48 chr17 5669092 5669594 -83834959 + L2 LINE L2 2152 2664 -650 1701 103 0 4 chr17 5669597 5669829 -83834724 - AluSg/x SINE Alu -1 309 79 1188 171 9 23 chr17 5669831 5670047 -83834506 - AluJo SINE Alu -41 271 59 2169 97 7 3 chr17 5670165 5670463 -83834090 + AluY SINE Alu 1 299 -12 1003 88 0 0 chr17 5670676 5670801 -83833752 + AluSq/x SINE Alu 1 125 -188 2268 109 3 0 chr17 5670805 5671108 -83833445 + AluSg SINE Alu 1 304 -6 715 281 55 44 chr17 5671110 5671675 -83832878 + L1M4 LINE L1 3422 3992 -2154 242 247 21 10 chr17 5671981 5672078 -83832475 + L1M4 LINE L1 4272 4369 -1777 1926 121 10 39 chr17 5673310 5673616 -83830937 - AluSq SINE Alu -16 297 1 780 143 0 0 chr17 5673802 5673914 -83830639 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 5673921 5673947 -83830606 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 5677946 5677975 -83826578 + AT_rich Low_complexity Low_complexity 1 29 0 635 251 15 41 chr17 5677976 5678171 -83826382 - LTR41 LTR ERVL -583 190 1 2462 107 8 8 chr17 5678415 5678770 -83825783 - THE1A LTR MaLR 0 355 1 12042 84 11 5 chr17 5678770 5680340 -83824213 - THE1A-int LTR MaLR 0 1580 1 2458 102 11 8 chr17 5680340 5680694 -83823859 - THE1A LTR MaLR 0 355 1 1162 239 15 23 chr17 5680797 5681060 -83823493 + MIR SINE MIR 2 262 0 845 138 23 0 chr17 5681135 5681265 -83823288 - FLAM_C SINE Alu 0 133 1 2529 61 0 3 chr17 5681996 5682293 -83822260 - AluY SINE Alu -15 296 1 2219 120 13 0 chr17 5682450 5682758 -83821795 + AluSx SINE Alu 1 312 0 1420 197 39 8 chr17 5682760 5683120 -83821433 + L1M4 LINE L1 4480 4850 -1296 2323 101 0 0 chr17 5683125 5683421 -83821132 - AluY SINE Alu -15 296 1 246 180 0 0 chr17 5683425 5683475 -83821078 + L1MA10 LINE L1 6285 6334 0 1756 88 0 0 chr17 5684792 5685009 -83819544 + AluSg/x SINE Alu 85 301 -11 192 313 127 45 chr17 5685130 5685264 -83819289 - L2 LINE L2 -218 3054 2910 293 265 102 48 chr17 5685607 5685773 -83818780 - HAL1 LINE L1 -8 2499 2325 1779 133 29 32 chr17 5685773 5686089 -83818464 - MER21A LTR ERV1 0 931 617 2218 120 0 3 chr17 5686090 5686389 -83818164 - AluSq SINE Alu -15 298 1 2254 118 0 0 chr17 5686389 5686685 -83817868 - AluSx SINE Alu -16 296 1 2158 105 22 0 chr17 5687113 5687426 -83817127 + AluSg SINE Alu 1 319 0 2365 74 0 10 chr17 5687427 5687725 -83816828 + AluY SINE Alu 1 295 -16 359 234 115 40 chr17 5687824 5687978 -83816575 - MIR SINE MIR -58 204 34 2255 110 0 23 chr17 5688014 5688323 -83816230 + AluSx SINE Alu 1 302 -10 354 248 248 18 chr17 5688661 5688774 -83815779 + MIR3 SINE MIR 49 187 -21 2393 99 0 0 chr17 5688899 5689201 -83815352 + AluSq SINE Alu 1 302 -11 2448 76 0 7 chr17 5689473 5689775 -83814778 + AluY SINE Alu 1 300 -11 2148 101 0 21 chr17 5689787 5690074 -83814479 + AluSq SINE Alu 2 282 -31 252 152 22 0 chr17 5690271 5690317 -83814236 - L2 LINE L2 -2 3270 3224 319 264 0 0 chr17 5690357 5690429 -83814124 + MIR SINE MIR 15 86 -176 2380 92 0 0 chr17 5690793 5691086 -83813467 - AluSx SINE Alu -16 296 4 2380 102 0 22 chr17 5691094 5691408 -83813145 - AluSg SINE Alu -3 307 1 813 133 0 113 chr17 5691415 5691565 -83812988 - FLAM_A SINE Alu 0 133 1 2121 190 74 88 chr17 5691754 5692220 -83812333 - MER77 LTR ERV1 0 605 134 2099 137 0 3 chr17 5692220 5692520 -83812033 - AluSx SINE Alu -13 299 1 2414 84 0 3 chr17 5692530 5692827 -83811726 - AluSg SINE Alu -14 296 1 2121 190 74 88 chr17 5692827 5692917 -83811636 - MER77 LTR ERV1 -480 125 46 735 140 61 0 chr17 5692950 5693064 -83811489 + FLAM_C SINE Alu 6 126 -17 2352 105 7 0 chr17 5693225 5693531 -83811022 + AluSx SINE Alu 1 308 -4 1928 160 0 0 chr17 5693539 5693833 -83810720 + AluJo SINE Alu 1 294 -18 5327 31 0 0 chr17 5693833 5694449 -83810104 + L1PA4 LINE L1 5536 6151 -4 264 30 0 0 chr17 5694449 5694482 -83810071 + (CA)n Simple_repeat Simple_repeat 2 34 0 1538 215 44 133 chr17 5694953 5695168 -83809385 - L1ME3A LINE L1 -5 6165 5933 2420 104 0 0 chr17 5695168 5695476 -83809077 - AluSg SINE Alu -1 309 2 1538 215 44 133 chr17 5695476 5695637 -83808916 - L1ME3A LINE L1 -237 5933 5864 1508 164 20 55 chr17 5695637 5695955 -83808598 - AluJo SINE Alu 0 308 1 1538 215 44 133 chr17 5695955 5696208 -83808345 - L1ME3A LINE L1 -306 5864 5590 2356 112 0 3 chr17 5696219 5696532 -83808021 - AluSx SINE Alu 0 312 1 2537 58 0 0 chr17 5697000 5697292 -83807261 - AluY SINE Alu -8 303 12 2392 88 0 0 chr17 5697292 5697587 -83806966 - AluY SINE Alu -16 295 1 844 209 90 101 chr17 5697597 5697975 -83806578 - MLT1A2 LTR MaLR 0 374 1 2092 145 0 3 chr17 5698002 5698298 -83806255 - AluSx SINE Alu -17 295 1 1687 162 75 0 chr17 5698326 5698604 -83805949 + AluJb SINE Alu 1 299 -13 600 298 70 83 chr17 5698760 5699133 -83805420 + L2 LINE L2 2946 3313 0 801 257 25 50 chr17 5699133 5699239 -83805314 - MIR SINE MIR 0 262 155 2531 73 0 0 chr17 5699239 5699542 -83805011 - AluY SINE Alu -8 303 1 801 257 25 50 chr17 5699542 5699676 -83804877 - MIR SINE MIR -107 155 28 2218 111 34 0 chr17 5699817 5700115 -83804438 - AluSx SINE Alu 0 312 5 1931 163 0 7 chr17 5700354 5700655 -83803898 - AluJo SINE Alu -13 299 1 204 201 152 28 chr17 5700704 5700822 -83803731 + MIR SINE MIR 11 159 -49 2037 74 4 0 chr17 5702499 5702771 -83801782 + AluSp SINE Alu 39 311 0 622 299 155 51 chr17 5702981 5703176 -83801377 + L2 LINE L2 2006 2179 -1093 2245 98 0 30 chr17 5703176 5703481 -83801072 - AluSx SINE Alu -16 296 1 622 299 155 51 chr17 5703481 5704089 -83800464 + L2 LINE L2 2179 2722 -550 2306 107 3 3 chr17 5704089 5704398 -83800155 + AluSg SINE Alu 1 309 -1 622 299 155 51 chr17 5704398 5704711 -83799842 + L2 LINE L2 2722 3266 -6 24 0 0 0 chr17 5704795 5704819 -83799734 + AT_rich Low_complexity Low_complexity 1 24 0 339 359 145 0 chr17 5704819 5704950 -83799603 + L2 LINE L2 3116 3265 -7 2251 102 13 3 chr17 5705206 5705509 -83799044 + AluSq SINE Alu 1 306 -7 2179 119 14 0 chr17 5705645 5705939 -83798614 + AluSx SINE Alu 1 298 -14 483 239 90 0 chr17 5706078 5706212 -83798341 - MLT1L LTR MaLR 0 615 470 402 209 181 60 chr17 5706239 5706343 -83798210 - MLT1L LTR MaLR -211 404 314 2237 92 46 0 chr17 5706343 5706627 -83797926 - AluSc SINE Alu -12 297 1 402 209 181 60 chr17 5706627 5706704 -83797849 - MLT1L LTR MaLR -301 314 201 1954 167 39 28 chr17 5706706 5706913 -83797640 - MLT1A1 LTR MaLR -1 364 150 1914 156 0 56 chr17 5706913 5707082 -83797471 - AluJo SINE Alu -9 303 159 2374 96 0 10 chr17 5707082 5707385 -83797168 - AluY SINE Alu -11 300 1 1914 156 0 56 chr17 5707385 5707536 -83797017 - AluJo SINE Alu -153 159 1 1954 167 39 28 chr17 5707536 5707688 -83796865 - MLT1A1 LTR MaLR -215 150 1 6782 195 65 42 chr17 5707688 5708845 -83795708 - MLT1A1-int LTR MaLR 0 1735 532 2207 126 3 0 chr17 5708845 5709154 -83795399 + AluSq SINE Alu 1 310 -3 6782 195 65 42 chr17 5709154 5709532 -83795021 - MLT1A1-int LTR MaLR -1203 532 164 423 115 16 0 chr17 5709632 5709693 -83794860 - AluS SINE Alu -255 63 2 2443 80 0 0 chr17 5709778 5710077 -83794476 + AluSg SINE Alu 1 299 -11 333 280 131 0 chr17 5710294 5710401 -83794152 + MIR3 SINE MIR 36 156 -52 227 283 17 0 chr17 5710683 5710743 -83793810 - L2 LINE L2 -273 3040 2980 184 282 91 36 chr17 5711170 5711280 -83793273 - L3 LINE CR1 -2 1575 1460 2215 121 3 10 chr17 5711466 5711780 -83792773 - AluSp SINE Alu 0 313 2 1045 224 92 7 chr17 5712105 5712386 -83792167 + MLT1D LTR MaLR 41 345 -160 1913 148 7 3 chr17 5712561 5712868 -83791685 - AluJo SINE Alu 0 308 1 446 238 61 37 chr17 5712934 5713098 -83791455 + MLT1H1 LTR MaLR 10 177 -413 725 96 0 0 chr17 5713101 5713195 -83791358 + AluSg1 SINE Alu 2 95 -214 776 215 37 19 chr17 5714393 5714607 -83789946 + LTR7 LTR ERV1 233 450 0 1553 94 5 0 chr17 5714607 5714810 -83789743 + AluSg1 SINE Alu 93 296 -16 711 261 92 38 chr17 5714813 5715181 -83789372 + MLT1H1 LTR MaLR 168 555 0 551 208 219 6 chr17 5715449 5715627 -83788926 + MLT1D LTR MaLR 290 505 0 2471 88 0 3 chr17 5715658 5715966 -83788587 - AluSx SINE Alu -5 307 1 3642 156 26 61 chr17 5716275 5716494 -83788059 + LTR62 LTR ERVK 1 226 -493 2475 103 0 0 chr17 5716494 5716804 -83787749 + AluSg SINE Alu 1 310 0 3642 156 26 61 chr17 5716804 5716871 -83787682 + LTR62 LTR ERVK 226 294 -425 2395 103 0 0 chr17 5716871 5717173 -83787380 + AluSp SINE Alu 1 302 -11 3642 156 26 61 chr17 5717173 5717628 -83786925 + LTR62 LTR ERVK 294 717 -2 741 170 7 21 chr17 5717837 5717978 -83786575 - AluY SINE Alu -22 289 151 260 150 0 0 chr17 5717978 5718018 -83786535 - Alu SINE Alu -268 40 1 248 188 12 47 chr17 5718020 5718105 -83786448 + L1MC4a LINE L1 5858 5939 -1869 2296 112 0 0 chr17 5718105 5718409 -83786144 + AluSq SINE Alu 1 304 -9 3992 185 43 21 chr17 5718465 5719134 -83785419 - L1MB7 LINE L1 0 6184 5531 2184 112 7 7 chr17 5719134 5719430 -83785123 - AluSq SINE Alu -17 296 1 3992 185 43 21 chr17 5719430 5719757 -83784796 - L1MB7 LINE L1 -653 5531 5212 2294 113 6 0 chr17 5719757 5720068 -83784485 - AluSp SINE Alu 0 313 1 3992 185 43 21 chr17 5720068 5720537 -83784016 - L1MB7 LINE L1 -972 5212 4683 346 125 0 0 chr17 5720543 5720591 -83783962 + Alu SINE Alu 1 48 -254 1326 114 11 0 chr17 5720697 5720872 -83783681 - AluSg SINE Alu -133 177 1 2049 122 30 7 chr17 5720935 5721230 -83783323 + AluSx SINE Alu 11 312 0 2159 105 7 13 chr17 5721232 5721537 -83783016 + AluSg SINE Alu 1 303 -7 286 330 0 0 chr17 5721544 5721635 -83782918 + L1ME LINE L1 5560 5650 -520 1784 173 77 0 chr17 5721641 5721954 -83782599 - MER1B DNA MER1_type 0 337 1 1671 167 10 20 chr17 5722020 5722320 -83782233 + AluJo SINE Alu 1 297 -15 1358 139 19 43 chr17 5722320 5722578 -83781975 - Charlie1b DNA MER1_type -213 310 59 230 312 19 8 chr17 5722603 5722707 -83781846 + L1PA8A LINE L1 5673 5772 -349 259 242 32 74 chr17 5722710 5722805 -83781748 + L2 LINE L2 3173 3263 -9 2362 98 0 13 chr17 5723029 5723344 -83781209 + AluSp SINE Alu 1 311 -2 2149 124 0 0 chr17 5723416 5723714 -83780839 + AluSx SINE Alu 3 300 -12 2197 119 3 3 chr17 5723715 5724025 -83780528 + AluSp SINE Alu 1 310 -3 3669 169 95 18 chr17 5724031 5724704 -83779849 + MER21B LTR ERV1 94 818 -45 2345 82 0 0 chr17 5724725 5725035 -83779518 + AluSc SINE Alu 1 310 0 1505 186 4 22 chr17 5725042 5725317 -83779236 + AluJo SINE Alu 1 270 -42 252 0 0 0 chr17 5725336 5725364 -83779189 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1285 165 81 18 chr17 5725392 5725665 -83778888 + AluJo SINE Alu 13 302 -10 27 49 0 0 chr17 5725736 5725777 -83778776 + AT_rich Low_complexity Low_complexity 1 41 0 260 192 0 0 chr17 5725984 5726036 -83778517 - L2 LINE L2 0 3313 3262 1170 148 6 0 chr17 5726187 5726363 -83778190 - AluSg/x SINE Alu -2 310 134 1951 127 3 39 chr17 5726363 5726671 -83777882 - AluSx SINE Alu -15 297 1 1816 64 4 0 chr17 5726707 5726940 -83777613 - L1PA6 LINE L1 -2 6152 5919 2123 106 3 10 chr17 5727059 5727362 -83777191 - AluSx SINE Alu -11 301 1 501 291 0 47 chr17 5727821 5727993 -83776560 - MIR SINE MIR -96 166 3 1804 80 0 0 chr17 5728111 5728337 -83776216 + AluSg/x SINE Alu 72 297 -15 2108 190 107 34 chr17 5729320 5729846 -83774707 - LTR6A LTR ERV1 0 564 1 2159 106 7 7 chr17 5730163 5730456 -83774097 - AluSx SINE Alu -19 293 1 1588 163 69 7 chr17 5730723 5731000 -83773553 + AluJo SINE Alu 1 294 -18 1726 164 44 0 chr17 5731002 5731295 -83773258 + AluJb SINE Alu 1 306 -6 747 169 0 0 chr17 5731296 5731414 -83773139 + FLAM_C SINE Alu 1 118 -15 24 0 0 0 chr17 5731460 5731484 -83773069 + AT_rich Low_complexity Low_complexity 1 24 0 2563 61 0 0 chr17 5731495 5731792 -83772761 + AluY SINE Alu 1 297 -14 823 138 23 0 chr17 5732522 5732652 -83771901 + FLAM_C SINE Alu 1 133 0 1055 249 4 8 chr17 5732751 5732992 -83771561 - MIR SINE MIR -21 241 2 2419 104 11 8 chr17 5733095 5733449 -83771104 + THE1A LTR MaLR 1 355 0 11897 84 11 5 chr17 5733449 5735019 -83769534 + THE1A-int LTR MaLR 1 1580 0 2441 107 8 8 chr17 5735019 5735374 -83769179 + THE1A LTR MaLR 1 355 0 676 246 15 41 chr17 5735618 5735813 -83768740 + LTR41 LTR ERVL 1 190 -583 29 0 0 0 chr17 5735814 5735843 -83768710 + AT_rich Low_complexity Low_complexity 1 29 0 1386 217 64 31 chr17 5737012 5737079 -83767474 - Charlie2 DNA MER1_type -510 2352 2289 2133 108 10 20 chr17 5737079 5737385 -83767168 + AluSg SINE Alu 1 303 -7 1386 217 64 31 chr17 5737385 5737800 -83766753 - Charlie2 DNA MER1_type -573 2289 1854 2048 115 3 17 chr17 5737828 5738115 -83766438 - AluSx SINE Alu -29 283 1 2037 133 0 10 chr17 5738489 5738782 -83765771 + AluSx SINE Alu 1 290 -22 1703 104 0 0 chr17 5739896 5740126 -83764427 - AluSg/x SINE Alu -1 309 80 2560 57 0 0 chr17 5740185 5740482 -83764071 - AluY SINE Alu -14 297 1 436 269 133 50 chr17 5741024 5741234 -83763319 + HAL1 LINE L1 1156 1347 -1160 2287 111 0 7 chr17 5741234 5741540 -83763013 + AluSx SINE Alu 1 304 -8 436 269 133 50 chr17 5741540 5741787 -83762766 + HAL1 LINE L1 1347 1651 -856 2147 116 7 3 chr17 5741835 5742145 -83762408 + AluSx SINE Alu 1 311 -1 2246 125 0 0 chr17 5742217 5742522 -83762031 + AluSx SINE Alu 1 305 -7 1005 169 0 11 chr17 5742565 5742743 -83761810 - AluSg/x SINE Alu -9 301 126 1990 204 75 29 chr17 5742743 5743292 -83761261 + L1M4 LINE L1 3613 4186 -1960 204 40 0 0 chr17 5743292 5743317 -83761236 + (TA)n Simple_repeat Simple_repeat 2 26 0 3640 208 55 7 chr17 5743322 5744030 -83760523 + MER21B LTR ERV1 36 777 -86 235 132 0 0 chr17 5744031 5744069 -83760484 + L1MB8 LINE L1 6141 6178 0 1000 260 46 26 chr17 5744203 5744591 -83759962 + L1M4 LINE L1 3490 3862 -2284 682 151 0 0 chr17 5744591 5744710 -83759843 + L1MA6 LINE L1 6177 6295 -5 2267 101 10 3 chr17 5744715 5745023 -83759530 + AluSg SINE Alu 1 310 0 2090 106 24 10 chr17 5745036 5745328 -83759225 - AluSx SINE Alu -16 296 1 4686 207 50 45 chr17 5745328 5746694 -83757859 + L1MA4 LINE L1 2254 3612 -3953 1795 163 10 10 chr17 5746694 5746826 -83757727 + AluJb SINE Alu 1 132 -180 2012 149 0 3 chr17 5746826 5747127 -83757426 + AluJo SINE Alu 1 300 -12 1795 163 10 10 chr17 5747127 5747283 -83757270 + AluJb SINE Alu 131 289 -23 4686 207 50 45 chr17 5747283 5747445 -83757108 + L1MA4 LINE L1 3612 3772 -3793 1370 164 56 72 chr17 5747445 5747583 -83756970 + AluJo SINE Alu 1 140 -172 2238 99 0 3 chr17 5747583 5747875 -83756678 + AluSq SINE Alu 1 291 -22 1370 164 56 72 chr17 5747875 5748041 -83756512 + AluJo SINE Alu 140 300 -12 4686 207 50 45 chr17 5748041 5748278 -83756275 + L1MA4 LINE L1 3772 4037 -3528 6431 154 59 126 chr17 5748283 5748459 -83756094 + L1MA4 LINE L1 5141 5327 -2396 2118 138 3 3 chr17 5748459 5748771 -83755782 + AluSx SINE Alu 1 312 0 6431 154 59 126 chr17 5748771 5750678 -83753875 + L1MA4 LINE L1 5327 7085 -638 2012 104 3 83 chr17 5750678 5751004 -83753549 + AluSq SINE Alu 2 301 -12 1775 179 45 73 chr17 5751004 5751495 -83753058 + L1MA4 LINE L1 7242 7718 -1 464 206 37 0 chr17 5751490 5751597 -83752956 + L1MC1 LINE L1 5282 5392 -941 * 4447 179 33 7 chr17 5751604 5752460 -83752093 + L1MC1 LINE L1 5456 6333 0 1345 170 33 8 chr17 5752471 5752712 -83751841 - Tigger3(Golem) DNA MER2_type 0 3029 2783 2425 95 0 13 chr17 5752712 5753028 -83751525 + AluSx SINE Alu 1 312 0 585 252 22 0 chr17 5753060 5753195 -83751358 - Tigger3(Golem) DNA MER2_type -2890 139 2 2034 159 0 3 chr17 5754009 5754318 -83750235 + AluJb SINE Alu 1 308 -4 2120 75 65 0 chr17 5754318 5754596 -83749957 + AluSg SINE Alu 1 297 -13 353 242 80 93 chr17 5754606 5754895 -83749658 + L1MC5 LINE L1 7530 7814 -147 2328 78 3 3 chr17 5754895 5755189 -83749364 + AluSq SINE Alu 1 294 -19 353 242 80 93 chr17 5755189 5755287 -83749266 + L1MC5 LINE L1 7814 7912 -49 329 123 15 0 chr17 5755427 5755492 -83749061 + (TA)n Simple_repeat Simple_repeat 1 66 0 284 312 42 8 chr17 5756178 5756297 -83748256 - MIR SINE MIR -75 133 8 1862 153 3 3 chr17 5756387 5756669 -83747884 + AluJo SINE Alu 1 282 -30 243 0 0 0 chr17 5756674 5756701 -83747852 + (T)n Simple_repeat Simple_repeat 1 27 0 360 266 152 15 chr17 5756701 5757018 -83747535 + L1M3 LINE L1 5195 5545 -748 458 250 107 18 chr17 5757205 5757373 -83747180 - MIR SINE MIR -10 252 70 21 0 0 0 chr17 5757501 5757522 -83747031 + AT_rich Low_complexity Low_complexity 1 21 0 2284 86 3 35 chr17 5758243 5758556 -83745997 - AluSx SINE Alu -9 303 1 2367 90 0 0 chr17 5758809 5759108 -83745445 - AluY SINE Alu -12 299 1 461 299 41 28 chr17 5759251 5759473 -83745080 - MLT1J LTR MaLR -12 601 305 274 285 103 23 chr17 5759509 5759690 -83744863 - MLT1J LTR MaLR -287 159 2 1328 151 56 119 chr17 5759697 5759878 -83744675 - AluSx SINE Alu -13 299 145 2399 90 0 0 chr17 5759878 5760177 -83744376 - AluSx SINE Alu -12 300 2 1328 151 56 119 chr17 5760177 5760314 -83744239 - AluSx SINE Alu -167 145 1 388 299 162 5 chr17 5760480 5760684 -83743869 + MIR SINE MIR 6 241 -21 388 240 38 117 chr17 5761144 5761541 -83743012 + L2 LINE L2 2979 3310 -3 1815 156 16 13 chr17 5761910 5762267 -83742286 - L1MC3 LINE L1 -12 7983 7450 22 0 0 0 chr17 5763027 5763049 -83741504 + AT_rich Low_complexity Low_complexity 1 22 0 2451 57 0 27 chr17 5763050 5763350 -83741203 + AluY SINE Alu 1 292 -19 2191 92 7 26 chr17 5763927 5764231 -83740322 + AluSp SINE Alu 2 299 -14 1534 172 54 37 chr17 5764521 5764817 -83739736 + AluJo SINE Alu 1 301 -11 872 248 0 0 chr17 5765001 5765162 -83739391 + AluJb SINE Alu 129 289 -23 2280 95 0 16 chr17 5765164 5765468 -83739085 + AluSx SINE Alu 3 301 -11 376 270 110 19 chr17 5765471 5765789 -83738764 + L1M4 LINE L1 2270 2616 -3530 463 224 20 61 chr17 5765884 5766031 -83738522 + MIR SINE MIR 64 204 -58 225 279 15 0 chr17 5766041 5766109 -83738444 + MIR SINE MIR 167 235 -27 2497 83 0 3 chr17 5766311 5766625 -83737928 + AluSq SINE Alu 1 313 0 354 265 103 7 chr17 5766626 5766762 -83737791 + L1M4 LINE L1 3123 3271 -2875 751 192 48 12 chr17 5766765 5766932 -83737621 + AluJo SINE Alu 121 293 -19 294 277 188 66 chr17 5766932 5768002 -83736551 + L1M4 LINE L1 3306 4595 -1551 1542 132 123 8 chr17 5768002 5768253 -83736300 + AluSg1 SINE Alu 1 280 -29 294 277 188 66 chr17 5768253 5768615 -83735938 + L1M4 LINE L1 4595 4912 -1234 2056 112 32 0 chr17 5768624 5768909 -83735644 + AluSx SINE Alu 1 294 -18 483 154 13 0 chr17 5768919 5768997 -83735556 + AluJ/FLAM SINE Alu 2 80 -232 21 0 0 0 chr17 5769110 5769131 -83735422 + AT_rich Low_complexity Low_complexity 1 21 0 1627 168 14 3 chr17 5769168 5769454 -83735099 + AluSx SINE Alu 14 302 -10 1950 134 0 20 chr17 5769521 5769827 -83734726 - AluJo SINE Alu -12 300 1 2508 70 0 3 chr17 5769839 5770139 -83734414 - AluY SINE Alu -12 299 1 699 227 57 81 chr17 5770170 5770231 -83734322 - L1M4 LINE L1 -1455 4691 4630 1939 102 12 0 chr17 5770231 5770487 -83734066 + AluSp SINE Alu 37 295 -18 699 227 57 81 chr17 5770487 5770650 -83733903 - L1M4 LINE L1 -1516 4630 4465 2484 86 0 0 chr17 5770650 5770954 -83733599 - AluSc SINE Alu -4 305 2 2561 85 0 0 chr17 5770956 5771263 -83733290 - AluSq SINE Alu -6 307 1 699 227 57 81 chr17 5771263 5771369 -83733184 - L1M4 LINE L1 -1682 4464 4365 2524 62 0 10 chr17 5771372 5771676 -83732877 - AluY SINE Alu -10 301 1 1345 181 0 0 chr17 5771685 5771890 -83732663 - AluJb SINE Alu -23 289 85 2269 92 0 7 chr17 5771903 5772209 -83732344 - AluSx SINE Alu -8 304 1 2195 232 6 40 chr17 5772209 5772739 -83731814 - L1M4 LINE L1 -5697 845 334 476 239 26 0 chr17 5772743 5772860 -83731693 + L1M4 LINE L1 581 700 -5842 1021 133 0 0 chr17 5772885 5773035 -83731518 - AluSg/x SINE Alu -1 311 162 507 17 0 0 chr17 5773035 5773095 -83731458 - AluSp/q SINE Alu -16 297 238 1830 106 10 51 chr17 5773109 5773401 -83731152 - AluSx SINE Alu -32 280 1 2003 128 14 0 chr17 5773412 5773693 -83730860 - AluSx SINE Alu -7 305 21 837 178 51 0 chr17 5773777 5773934 -83730619 - MER20 DNA MER1_type -1 218 54 414 140 0 0 chr17 5773934 5773991 -83730562 + AluS SINE Alu 2 58 -260 180 0 0 0 chr17 5774007 5774027 -83730526 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2521 65 0 7 chr17 5774028 5774335 -83730218 + AluY SINE Alu 1 305 -6 395 250 48 16 chr17 5774407 5774531 -83730022 + L1MC4 LINE L1 7914 8041 -1 1247 278 224 49 chr17 5774563 5775052 -83729501 - L2 LINE L2 -1091 2223 1821 1646 164 114 0 chr17 5775052 5775332 -83729221 - AluJo SINE Alu 0 312 1 1247 278 224 49 chr17 5775332 5775389 -83729164 - L2 LINE L2 -1493 1821 1775 2121 118 7 0 chr17 5775389 5775678 -83728875 + AluSg SINE Alu 1 291 -19 1247 278 224 49 chr17 5775678 5776069 -83728484 - L2 LINE L2 -1539 1775 1121 1976 100 0 0 chr17 5776133 5776384 -83728169 - AluSg SINE Alu -6 304 54 643 295 104 39 chr17 5776458 5776814 -83727739 + LTR67 LTR ERVL 101 479 -78 2659 52 0 0 chr17 5776971 5777277 -83727276 - AluY SINE Alu -5 306 1 1694 181 56 3 chr17 5777521 5777809 -83726744 - AluJb SINE Alu -9 303 1 2290 92 27 0 chr17 5778673 5778966 -83725587 - AluSx SINE Alu -11 301 1 197 302 32 0 chr17 5778972 5779035 -83725518 - L2 LINE L2 -536 2778 2714 988 224 75 67 chr17 5779336 5779390 -83725163 + Charlie7 DNA MER1_type 284 336 -2276 2456 75 0 0 chr17 5779390 5779685 -83724868 - AluY SINE Alu -16 295 1 2259 85 0 7 chr17 5779688 5780004 -83724549 - AluSg SINE Alu 0 314 1 988 224 75 67 chr17 5780004 5780346 -83724207 + Charlie7 DNA MER1_type 337 688 -1924 2493 93 3 0 chr17 5780628 5780939 -83723614 - AluSp SINE Alu -1 312 1 2138 119 6 72 chr17 5781547 5781908 -83722645 - MER1B DNA MER1_type 0 337 1 2148 118 7 3 chr17 5784493 5784798 -83719755 - AluSc SINE Alu -1 308 3 2331 94 0 29 chr17 5784858 5785166 -83719387 - AluSx SINE Alu -13 299 1 1564 170 48 15 chr17 5785673 5785978 -83718575 - AluJo SINE Alu 0 319 6 207 276 51 71 chr17 5786929 5787027 -83717526 - MIR SINE MIR -5 257 162 460 165 52 0 chr17 5787063 5787160 -83717393 - Charlie1 DNA MER1_type -30 2731 2630 510 230 70 75 chr17 5787170 5787308 -83717245 - Charlie1 DNA MER1_type -2544 217 79 2149 132 0 19 chr17 5787308 5787626 -83716927 + AluJb SINE Alu 1 312 0 510 230 70 75 chr17 5787626 5787674 -83716879 - Charlie1 DNA MER1_type -2682 79 32 407 306 148 27 chr17 5787715 5787898 -83716655 - MIR SINE MIR -24 238 34 1784 154 44 17 chr17 5789246 5789539 -83715014 + AluJb SINE Alu 1 301 -11 186 244 89 67 chr17 5790211 5790301 -83714252 - L2 LINE L2 -2787 527 436 1384 152 0 0 chr17 5791429 5791667 -83712886 - AluJb SINE Alu 0 322 85 627 285 92 39 chr17 5791747 5792234 -83712319 - L1ME4a LINE L1 -1 6120 5608 2163 156 99 17 chr17 5793423 5793845 -83710708 + MSTB2 LTR MaLR 1 457 0 21 36 0 0 chr17 5794212 5794240 -83710313 + AT_rich Low_complexity Low_complexity 1 28 0 1512 180 11 18 chr17 5794602 5794905 -83709648 + AluSx SINE Alu 1 301 0 2158 115 14 0 chr17 5795036 5795322 -83709231 - AluSq SINE Alu -23 290 1 756 82 0 0 chr17 5796023 5796121 -83708432 - L1PA5 LINE L1 -3 6151 6054 2934 31 0 0 chr17 5796121 5796474 -83708079 + L1P2 LINE L1 5449 5801 -354 359 171 11 34 chr17 5796572 5796660 -83707893 + L1MA9 LINE L1 6222 6307 -5 1360 276 153 35 chr17 5796980 5797065 -83707488 + L2 LINE L2 316 390 -2924 2050 161 0 3 chr17 5797065 5797370 -83707183 - AluJb SINE Alu -4 308 5 1360 276 153 35 chr17 5797370 5797962 -83706591 + L2 LINE L2 390 1073 -2241 598 228 233 5 chr17 5798175 5798381 -83706172 + L2 LINE L2 1823 2075 -1239 405 0 0 0 chr17 5798382 5798427 -83706126 + (TC)n Simple_repeat Simple_repeat 2 46 0 26 50 0 0 chr17 5798439 5798479 -83706074 + GC_rich Low_complexity Low_complexity 1 40 0 262 239 31 25 chr17 5798618 5798777 -83705776 + (CCGCG)n Simple_repeat Simple_repeat 1 160 0 1167 281 93 21 chr17 5798938 5799508 -83705045 - HsTC2a DNA Tc2 0 744 134 204 40 0 0 chr17 5799724 5799749 -83704804 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 769 192 13 0 chr17 5800242 5800398 -83704155 + MLT1B LTR MaLR 192 349 -41 236 162 0 0 chr17 5800441 5800478 -83704075 + MLT1B LTR MaLR 354 390 0 2206 77 6 45 chr17 5800537 5800849 -83703704 - AluSg SINE Alu -9 301 2 573 287 80 23 chr17 5800858 5801158 -83703395 + L1MC/D LINE L1 5479 5795 -2013 2041 129 0 17 chr17 5801170 5801465 -83703088 + AluJb SINE Alu 11 300 -12 2851 6 0 22 chr17 5801465 5801782 -83702771 + AluY SINE Alu 1 310 -1 2350 105 0 0 chr17 5801782 5802076 -83702477 + AluSp SINE Alu 1 294 -19 1267 135 0 0 chr17 5802076 5802254 -83702299 + AluSc SINE Alu 132 309 0 1223 145 0 0 chr17 5802754 5802926 -83701627 - AluJb SINE Alu -140 172 1 2342 73 7 17 chr17 5803558 5803858 -83700695 - AluY SINE Alu -14 297 1 2477 80 0 3 chr17 5804252 5804551 -83700002 + AluSc SINE Alu 1 298 -11 1725 182 30 0 chr17 5804632 5804929 -83699624 + AluJo SINE Alu 1 306 -6 2354 103 3 0 chr17 5805530 5805831 -83698722 - AluSp SINE Alu -11 302 1 262 300 56 0 chr17 5805866 5805956 -83698597 - MIR SINE MIR -70 192 98 189 301 126 75 chr17 5805986 5806225 -83698328 - L2 LINE L2 -18 3254 3004 1530 152 97 15 chr17 5806374 5806509 -83698044 + AluSq SINE Alu 1 124 -189 1425 150 49 95 chr17 5806509 5806835 -83697718 + AluSq SINE Alu 1 311 -2 1530 152 97 15 chr17 5806835 5806968 -83697585 + AluSq SINE Alu 124 291 -22 1976 144 6 13 chr17 5806978 5807291 -83697262 - AluSx SINE Alu -1 311 1 2155 91 63 0 chr17 5807568 5807854 -83696699 - AluSx SINE Alu -7 305 2 452 256 131 64 chr17 5808813 5808940 -83695613 - L2 LINE L2 -58 3255 3138 1826 139 49 7 chr17 5808940 5809227 -83695326 - AluJb SINE Alu -13 299 1 452 256 131 64 chr17 5809227 5809412 -83695141 - L2 LINE L2 -175 3138 2922 2076 136 7 3 chr17 5809529 5809831 -83694722 - AluJb SINE Alu -9 303 1 2033 143 17 0 chr17 5809948 5810241 -83694312 + AluSx SINE Alu 7 304 -8 2285 45 7 41 chr17 5810419 5810746 -83693807 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 5811780 5811806 -83692747 + (CAG)n Simple_repeat Simple_repeat 3 28 0 605 265 92 5 chr17 5812024 5812209 -83692344 - MIR SINE MIR -3 259 59 2248 78 0 19 chr17 5812511 5812818 -83691735 - AluSc SINE Alu -8 301 1 2096 86 52 0 chr17 5812998 5813299 -83691254 - AluSx SINE Alu 0 315 1 268 347 116 0 chr17 5813366 5813487 -83691066 - L2 LINE L2 -1 3271 3137 257 237 340 0 chr17 5813495 5813592 -83690961 + L2 LINE L2 3141 3270 -2 1135 93 0 0 chr17 5813743 5813882 -83690671 + AluSg SINE Alu 1 139 -171 364 75 0 0 chr17 5813887 5813940 -83690613 + Alu SINE Alu 248 300 0 409 260 133 29 chr17 5814018 5814191 -83690362 - MIR SINE MIR -10 252 62 963 258 76 63 chr17 5816249 5816531 -83688022 + L2 LINE L2 2211 2503 -811 2467 93 0 0 chr17 5816531 5816843 -83687710 - AluSp SINE Alu -1 312 1 963 258 76 63 chr17 5816843 5817018 -83687535 + L2 LINE L2 2503 2674 -640 2339 107 0 13 chr17 5817059 5817376 -83687177 - AluSq SINE Alu 0 313 1 338 203 109 0 chr17 5817385 5817513 -83687040 - L1M4 LINE L1 -2191 3955 3814 1431 101 11 0 chr17 5817513 5817702 -83686851 - AluSg/x SINE Alu -13 299 109 344 23 0 0 chr17 5817702 5817745 -83686808 + AluSc SINE Alu 92 134 -165 740 231 64 0 chr17 5817745 5817901 -83686652 + AluJo/FRAM SINE Alu 137 302 0 2018 184 23 76 chr17 5817923 5818259 -83686294 + L1M4 LINE L1 3951 4246 -1900 1734 107 133 0 chr17 5818259 5818522 -83686031 + AluSg SINE Alu 1 298 -2 2018 184 23 76 chr17 5818522 5818754 -83685799 + L1M4 LINE L1 4246 4489 -1657 2230 110 10 0 chr17 5818754 5819054 -83685499 + AluSg SINE Alu 1 303 -7 269 23 0 70 chr17 5819068 5819111 -83685442 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 1580 166 25 31 chr17 5819112 5819267 -83685286 + L1M4 LINE L1 4741 4895 -1251 2413 62 10 20 chr17 5819267 5819573 -83684980 - AluY SINE Alu -7 304 2 1580 166 25 31 chr17 5819573 5819859 -83684694 + L1M4 LINE L1 4895 5308 -838 1870 98 0 8 chr17 5819860 5820105 -83684448 + AluSx SINE Alu 1 243 -69 2915 12 0 6 chr17 5820124 5820444 -83684109 + AluYb8 SINE Alu 1 318 0 793 151 22 29 chr17 5820449 5820588 -83683965 + FRAM SINE Alu 1 138 -38 1833 175 13 34 chr17 5820615 5821038 -83683515 + L1M4 LINE L1 5254 5667 -507 191 0 0 62 chr17 5821138 5821170 -83683383 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 670 71 24 0 chr17 5821170 5821255 -83683298 - AluSg/x SINE Alu -31 278 192 1907 62 0 4 chr17 5821174 5821415 -83683138 - AluSg SINE Alu -37 273 34 2244 93 0 3 chr17 5822508 5822809 -83681744 + AluSx SINE Alu 1 300 -12 1343 187 37 23 chr17 5824707 5824879 -83679674 - AluJo SINE Alu -8 304 125 2068 138 0 0 chr17 5824879 5825191 -83679362 - AluSx SINE Alu 0 312 1 1343 187 37 23 chr17 5825191 5825318 -83679235 - AluJo SINE Alu -187 125 1 888 187 22 39 chr17 5825319 5825331 -83679222 - L1MC1 LINE L1 0 6333 6322 1946 103 4 0 chr17 5825331 5825594 -83678959 - AluSp SINE Alu -12 301 38 2223 94 0 7 chr17 5825594 5825893 -83678660 - AluSx SINE Alu -15 297 1 888 187 22 39 chr17 5825893 5826061 -83678492 - L1MC1 LINE L1 -9 6324 6155 691 279 67 41 chr17 5826061 5826376 -83678177 + L2 LINE L2 2974 3296 -17 818 202 5 58 chr17 5827102 5827212 -83677341 + MER45A DNA AcHobo 1 98 -1483 2209 82 10 0 chr17 5827212 5827505 -83677048 - AluY SINE Alu -15 296 1 818 202 5 58 chr17 5827505 5827582 -83676971 + MER45A DNA AcHobo 98 178 0 413 245 9 107 chr17 5828323 5828400 -83676153 - MIR SINE MIR -17 245 162 2118 102 3 7 chr17 5828400 5828695 -83675858 - AluSx SINE Alu -18 294 1 413 245 9 107 chr17 5828695 5828851 -83675702 - MIR SINE MIR -100 162 34 2451 65 0 7 chr17 5828893 5829202 -83675351 - AluY SINE Alu -4 307 1 1969 135 0 0 chr17 5829202 5829498 -83675055 - AluSx SINE Alu -16 296 1 2414 77 0 0 chr17 5829669 5829980 -83674573 - AluY SINE Alu 0 311 1 1926 97 56 3 chr17 5830072 5830360 -83674193 - AluSc SINE Alu -6 303 1 292 342 13 13 chr17 5830366 5830383 -83674170 - L1MA10 LINE L1 0 6334 6318 913 212 8 54 chr17 5830383 5830624 -83673929 - L1ME2 LINE L1 -9 6155 5926 2131 70 35 3 chr17 5830625 5830910 -83673643 + AluSp SINE Alu 1 294 -19 1307 117 187 44 chr17 5830919 5831146 -83673407 + AluJb SINE Alu 1 275 -37 2399 60 0 7 chr17 5831146 5831448 -83673105 + AluY SINE Alu 1 300 -11 1307 117 187 44 chr17 5831448 5831493 -83673060 + AluJb SINE Alu 275 312 0 1325 223 72 5 chr17 5831495 5831913 -83672640 + L1ME2 LINE L1 5326 5771 -393 365 314 116 0 chr17 5831965 5832086 -83672467 + L2 LINE L2 3137 3271 -1 25 75 0 0 chr17 5832251 5832304 -83672249 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr17 5832486 5832521 -83672032 + GC_rich Low_complexity Low_complexity 1 35 0 36 77 0 0 chr17 5832551 5832629 -83671924 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 5833015 5833038 -83671515 + GC_rich Low_complexity Low_complexity 1 23 0 1690 157 48 0 chr17 5834176 5834470 -83670083 - AluJo SINE Alu -4 308 1 2230 99 0 0 chr17 5835839 5836142 -83668411 + AluSq SINE Alu 1 303 -10 2100 62 87 3 chr17 5836765 5837054 -83667499 - AluSq SINE Alu 0 313 1 1376 170 33 33 chr17 5837291 5837591 -83666962 - AluJb SINE Alu -12 300 1 1185 111 0 0 chr17 5837598 5837760 -83666793 - AluSq SINE Alu -18 295 134 2160 120 0 0 chr17 5837760 5838069 -83666484 - AluSc SINE Alu 0 309 1 731 256 0 55 chr17 5838069 5838268 -83666285 + L1ME2 LINE L1 5925 6112 -52 2064 128 0 0 chr17 5838461 5838473 -83666080 - AluSx SINE Alu -15 297 286 195 69 0 0 chr17 5838473 5838502 -83666051 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2064 128 0 0 chr17 5838502 5838786 -83665767 - AluSx SINE Alu -25 287 1 387 267 125 114 chr17 5838895 5839066 -83665487 - L1ME2 LINE L1 -368 5753 5585 2019 109 4 0 chr17 5839066 5839341 -83665212 + AluSx SINE Alu 13 288 -24 387 267 125 114 chr17 5839341 5839665 -83664888 - L1ME2 LINE L1 -536 5585 5251 344 268 39 4 chr17 5840540 5840776 -83663777 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 2166 104 0 3 chr17 5841576 5841875 -83662678 + AluSx SINE Alu 1 298 -14 2178 101 0 0 chr17 5842857 5843153 -83661400 + AluY SINE Alu 1 296 -15 2226 95 0 0 chr17 5843153 5843449 -83661104 + AluY SINE Alu 1 296 -15 1264 96 6 6 chr17 5845192 5845369 -83659184 + AluSq SINE Alu 1 177 -136 309 141 0 0 chr17 5845406 5845428 -83659125 + (A)n Simple_repeat Simple_repeat 1 22 -42 2268 75 10 0 chr17 5845428 5845720 -83658833 - AluSp SINE Alu -18 295 1 309 141 0 0 chr17 5845720 5845732 -83658821 + (A)n Simple_repeat Simple_repeat 22 33 -31 1995 101 40 0 chr17 5845732 5846033 -83658520 - AluSq SINE Alu 0 313 1 309 141 0 0 chr17 5846033 5846048 -83658505 + (A)n Simple_repeat Simple_repeat 33 47 -17 2412 49 7 3 chr17 5846048 5846352 -83658201 - AluY SINE Alu -6 305 1 309 141 0 0 chr17 5846352 5846364 -83658189 + (A)n Simple_repeat Simple_repeat 46 64 0 2425 62 7 0 chr17 5846372 5846678 -83657875 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 5846748 5846777 -83657776 + AT_rich Low_complexity Low_complexity 1 29 0 1924 154 3 3 chr17 5846859 5847171 -83657382 - AluJb SINE Alu 0 312 1 1697 103 96 21 chr17 5847537 5847818 -83656735 + AluSq SINE Alu 1 302 -11 1236 111 0 0 chr17 5847819 5847990 -83656563 + AluSq SINE Alu 134 304 -9 382 305 59 32 chr17 5849257 5849444 -83655109 + MIR SINE MIR 13 204 -58 306 277 107 9 chr17 5849419 5849531 -83655022 - L2 LINE L2 0 3313 3191 * 945 148 17 126 chr17 5849536 5849593 -83654960 - MER3 DNA MER1_type -3 206 144 2232 96 3 19 chr17 5849593 5849768 -83654785 - AluSx SINE Alu -3 309 140 1911 96 74 0 chr17 5849768 5850039 -83654514 - AluSg SINE Alu -17 293 3 2232 96 3 19 chr17 5850039 5850177 -83654376 - AluSx SINE Alu -172 140 1 945 148 17 126 chr17 5850177 5850224 -83654329 - MER3 DNA MER1_type -65 144 93 2226 92 3 13 chr17 5850224 5850528 -83654025 + AluSx SINE Alu 1 301 -11 945 148 17 126 chr17 5850528 5850652 -83653901 - MER3 DNA MER1_type -116 93 2 1774 162 11 0 chr17 5850797 5851075 -83653478 - AluJo SINE Alu -31 281 1 2256 112 0 6 chr17 5851084 5851398 -83653155 - AluSx SINE Alu 0 312 1 679 153 90 0 chr17 5851431 5851542 -83653011 + FLAM_A SINE Alu 1 121 -12 948 174 31 0 chr17 5851608 5851769 -83652784 - AluJo/FRAM SINE Alu 0 302 137 1828 148 0 16 chr17 5851769 5852074 -83652479 - AluSg SINE Alu -10 300 1 2405 65 10 3 chr17 5852082 5852391 -83652162 - AluSp SINE Alu 0 313 3 2223 100 7 0 chr17 5852423 5852732 -83651821 + AluY SINE Alu 1 311 0 2195 108 0 0 chr17 5853188 5853493 -83651060 - AluSg SINE Alu -5 305 1 417 181 252 0 chr17 5853629 5853756 -83650797 - MIR SINE MIR -13 249 91 2207 106 0 0 chr17 5853852 5854153 -83650400 - AluSx SINE Alu -11 301 1 200 371 89 40 chr17 5854237 5854585 -83649968 - L2 LINE L2 -72 3200 2836 850 219 0 28 chr17 5854591 5854769 -83649784 + FRAM SINE Alu 2 174 -2 2310 102 0 3 chr17 5854822 5855135 -83649418 - AluSx SINE Alu 0 312 1 2140 98 10 0 chr17 5855142 5855437 -83649116 - AluSp SINE Alu -15 298 1 638 143 151 0 chr17 5855437 5855556 -83648997 - FLAM_C SINE Alu -5 138 2 2477 43 0 10 chr17 5855559 5855863 -83648690 - AluY SINE Alu -10 301 1 2277 82 0 7 chr17 5855863 5856167 -83648386 - AluSx SINE Alu -9 303 1 278 149 0 0 chr17 5856170 5856217 -83648336 - AluSq/x SINE Alu -169 133 87 2071 106 0 3 chr17 5856218 5856502 -83648051 + AluSq SINE Alu 1 283 -30 258 56 0 0 chr17 5856594 5856630 -83647923 + (A)n Simple_repeat Simple_repeat 1 36 0 300 111 0 0 chr17 5856633 5856678 -83647875 - AluSq/x SINE Alu -198 104 60 1650 166 0 11 chr17 5856678 5856956 -83647597 + AluJb SINE Alu 22 296 -16 2511 61 0 0 chr17 5856960 5857271 -83647282 + AluY SINE Alu 1 311 0 435 276 41 8 chr17 5857509 5857632 -83646921 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 5858218 5858311 -83646242 + GA-rich Low_complexity Low_complexity 3 90 0 1972 111 7 0 chr17 5860520 5860823 -83643730 + AluSx SINE Alu 1 305 0 355 298 118 0 chr17 5861691 5861852 -83642701 + MIR SINE MIR 57 236 -26 661 277 43 77 chr17 5861888 5862069 -83642484 + L2 LINE L2 3021 3190 -123 2038 108 0 29 chr17 5862069 5862375 -83642178 + AluSx SINE Alu 1 297 -15 661 277 43 77 chr17 5862375 5862493 -83642060 + L2 LINE L2 3190 3310 -3 2425 61 0 0 chr17 5864119 5864416 -83640137 - AluY SINE Alu -14 297 1 414 0 0 0 chr17 5865113 5865159 -83639394 + (TG)n Simple_repeat Simple_repeat 1 46 0 316 95 0 0 chr17 5865228 5865270 -83639283 + MER4E LTR ERV1 651 692 -74 246 316 76 76 chr17 5867035 5867115 -83637438 + MER20B DNA MER1_type 4 83 -700 2437 34 3 10 chr17 5867115 5867411 -83637142 + AluY SINE Alu 3 296 -15 246 316 76 76 chr17 5867411 5867501 -83637052 + MER20B DNA MER1_type 82 174 -609 2323 93 0 3 chr17 5868368 5868681 -83635872 + AluSx SINE Alu 1 312 0 668 224 105 53 chr17 5868809 5869037 -83635516 - MIR SINE MIR 0 262 23 2291 98 7 0 chr17 5869168 5869474 -83635079 - AluSx SINE Alu -4 308 1 1219 163 26 13 chr17 5870015 5870242 -83634311 - L1MB3 LINE L1 -1 6182 5953 2042 102 3 24 chr17 5870812 5871107 -83633446 - AluSx SINE Alu -15 297 9 827 204 7 0 chr17 5871855 5872007 -83632546 - FRAM SINE Alu -23 153 1 324 0 0 0 chr17 5872404 5872440 -83632113 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 819 152 65 0 chr17 5872440 5872578 -83631975 - AluSq SINE Alu -32 281 135 715 187 16 0 chr17 5873073 5873196 -83631357 + FLAM_C SINE Alu 1 125 -18 180 200 0 0 chr17 5873208 5873248 -83631305 + GA-rich Low_complexity Low_complexity 1 40 0 354 206 109 11 chr17 5873443 5873535 -83631018 + MIR SINE MIR 24 124 -138 2422 52 0 0 chr17 5873546 5873833 -83630720 - AluY SINE Alu -24 287 1 935 96 0 22 chr17 5873836 5873972 -83630581 - AluSq SINE Alu -180 133 1 418 198 62 0 chr17 5873973 5874069 -83630484 + MIR SINE MIR 113 214 -48 182 219 178 112 chr17 5874626 5874747 -83629806 + L2 LINE L2 2879 3015 -257 2275 77 3 3 chr17 5874747 5875046 -83629507 - AluSp SINE Alu -14 299 1 182 219 178 112 chr17 5875046 5875093 -83629460 + L2 LINE L2 3015 3058 -214 540 170 0 0 chr17 5875111 5875205 -83629348 - AluJ/FRAM SINE Alu -3 309 216 435 293 60 20 chr17 5875262 5875412 -83629141 + L2 LINE L2 3117 3272 0 268 360 82 19 chr17 5875530 5875797 -83628756 - L3b LINE CR1 -196 1387 1104 2321 97 3 0 chr17 5876892 5877201 -83627352 + AluSx SINE Alu 1 310 -2 383 192 0 67 chr17 5877942 5878135 -83626418 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 344 266 41 0 chr17 5878261 5878500 -83626053 + G-rich Low_complexity Low_complexity 1 248 0 296 204 58 29 chr17 5878504 5878676 -83625877 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 1791 106 4 34 chr17 5880108 5880373 -83624180 + AluSq SINE Alu 1 257 -56 2424 68 0 0 chr17 5880388 5880684 -83623869 + AluY SINE Alu 1 296 -15 2254 68 41 0 chr17 5880684 5880979 -83623574 + AluY SINE Alu 1 307 -4 1356 124 0 16 chr17 5880979 5881173 -83623380 + AluSq SINE Alu 108 298 -15 2105 123 0 3 chr17 5882642 5882951 -83621602 - AluSx SINE Alu -4 308 1 1510 107 0 30 chr17 5883641 5883874 -83620679 - AluSg/x SINE Alu 0 312 87 2257 83 0 0 chr17 5884713 5885001 -83619552 + AluSq SINE Alu 25 312 -1 2147 119 3 0 chr17 5886681 5886983 -83617570 - AluSx SINE Alu -9 303 1 849 178 33 75 chr17 5887382 5887556 -83616997 + MIR SINE MIR 23 188 -74 2321 83 3 0 chr17 5887556 5887856 -83616697 + AluSx SINE Alu 1 301 -11 849 178 33 75 chr17 5887856 5887895 -83616658 + MIR SINE MIR 188 227 -35 1761 179 3 10 chr17 5887938 5888240 -83616313 + AluJo SINE Alu 5 304 -8 517 302 148 0 chr17 5888759 5888961 -83615592 + MIR SINE MIR 27 258 -4 2220 81 3 0 chr17 5888964 5889272 -83615281 - AluSx SINE Alu 0 309 1 2337 81 3 0 chr17 5889301 5889598 -83614955 + AluSp SINE Alu 1 298 -15 2283 85 0 3 chr17 5889625 5889919 -83614634 + AluSq SINE Alu 1 293 -20 208 303 13 13 chr17 5890068 5890144 -83614409 + L2 LINE L2 3016 3091 -181 2273 66 0 10 chr17 5890332 5890646 -83613907 + AluSx SINE Alu 1 311 0 1732 136 13 46 chr17 5890786 5891088 -83613465 + AluJo SINE Alu 1 292 -20 327 344 26 20 chr17 5891159 5891310 -83613243 + L2 LINE L2 3150 3301 -12 2295 86 0 3 chr17 5891369 5891670 -83612883 + AluSc SINE Alu 1 300 -9 182 296 155 0 chr17 5891670 5891741 -83612812 - MIR SINE MIR -116 146 65 1049 204 13 22 chr17 5891741 5891972 -83612581 + AluJo SINE Alu 71 299 -13 2120 75 4 4 chr17 5891978 5892290 -83612263 + AluY SINE Alu 4 315 0 933 141 0 0 chr17 5892322 5892464 -83612089 - AluJb SINE Alu -3 309 168 820 176 8 0 chr17 5892551 5892682 -83611871 + FLAM_C SINE Alu 1 132 -1 1964 118 6 38 chr17 5892701 5893015 -83611538 + AluSx SINE Alu 1 304 -8 2551 173 63 23 chr17 5893015 5893153 -83611400 - L1MA4 LINE L1 -12 6288 6157 2171 127 0 0 chr17 5893153 5893460 -83611093 - AluSx SINE Alu -5 307 1 2551 173 63 23 chr17 5893460 5893921 -83610632 - L1MA4 LINE L1 -143 6157 5665 1099 168 0 22 chr17 5893921 5894100 -83610453 - AluJb SINE Alu -4 308 134 198 0 0 0 chr17 5894100 5894122 -83610431 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2185 81 0 3 chr17 5894122 5894407 -83610146 - AluY SINE Alu -27 284 1 1699 148 10 30 chr17 5894410 5894759 -83609794 - AluJb SINE Alu 0 312 2 987 144 0 0 chr17 5894759 5894932 -83609621 - L1MA4 LINE L1 -634 5666 5494 313 128 0 169 chr17 5894933 5895085 -83609468 - Alu SINE Alu 0 302 236 2286 84 0 16 chr17 5895085 5895394 -83609159 - AluY SINE Alu -7 304 1 189 0 0 0 chr17 5895396 5895417 -83609136 + (T)n Simple_repeat Simple_repeat 1 21 0 804 140 0 44 chr17 5895424 5895560 -83608993 - AluJb SINE Alu -182 130 1 443 99 33 0 chr17 5895560 5895651 -83608902 - L1MA4 LINE L1 -812 5488 5395 3762 152 18 47 chr17 5895658 5895725 -83608828 - L1MB7 LINE L1 0 6184 6117 2112 137 0 6 chr17 5895725 5896038 -83608515 + AluJb SINE Alu 1 311 -1 3762 152 18 47 chr17 5896038 5896358 -83608195 - L1MB7 LINE L1 -67 6117 5825 1574 170 0 74 chr17 5896358 5896694 -83607859 - AluJo SINE Alu -1 311 1 3762 152 18 47 chr17 5896694 5897035 -83607518 - L1MB7 LINE L1 -359 5825 5476 720 155 0 0 chr17 5897054 5897157 -83607396 - FRAM SINE Alu -37 139 37 481 95 0 0 chr17 5897157 5897231 -83607322 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 5897231 5897529 -83607024 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 5897539 5897673 -83606880 + AluJ SINE Alu 1 135 -177 2172 99 14 3 chr17 5897673 5897966 -83606587 + AluSg SINE Alu 1 296 -14 2061 141 0 3 chr17 5898789 5899102 -83605451 - AluSx SINE Alu 0 312 1 241 294 76 22 chr17 5899122 5899214 -83605339 - MIR3 SINE MIR -52 156 60 184 311 54 27 chr17 5900336 5900410 -83604143 + MIR3 SINE MIR 110 185 -23 829 216 6 0 chr17 5900508 5900670 -83603883 + AluJ SINE Alu 134 296 -16 2132 111 7 0 chr17 5900673 5900970 -83603583 + AluSp SINE Alu 1 299 -14 2074 128 0 0 chr17 5900979 5901277 -83603276 - AluY SINE Alu -13 298 1 1906 151 7 3 chr17 5901991 5902290 -83602263 + AluJo SINE Alu 4 303 -9 365 345 14 20 chr17 5902767 5902915 -83601638 - MIR SINE MIR 0 262 116 2589 43 0 0 chr17 5902989 5903292 -83601261 - AluY SINE Alu -8 303 1 2053 107 40 3 chr17 5905470 5905769 -83598784 - AluSx SINE Alu -2 310 1 2348 58 0 3 chr17 5905800 5906092 -83598461 + AluY SINE Alu 1 291 -20 1140 259 22 13 chr17 5907762 5908021 -83596532 - MER58B DNA MER1_type -2079 341 77 2325 95 0 0 chr17 5908021 5908325 -83596228 + AluSx SINE Alu 1 304 -8 1140 259 22 13 chr17 5908325 5908378 -83596175 - MER58B DNA MER1_type -2343 77 26 2292 87 0 3 chr17 5908388 5908686 -83595867 - AluSg SINE Alu -13 297 1 2203 87 0 31 chr17 5908699 5909020 -83595533 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 5909212 5909349 -83595204 - AluSq/x SINE Alu -180 133 1 246 32 0 0 chr17 5912853 5912884 -83591669 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2116 85 0 0 chr17 5913139 5913410 -83591143 + AluSx SINE Alu 24 294 -18 1988 113 23 17 chr17 5913535 5913837 -83590716 + AluSg SINE Alu 1 304 -6 2267 71 3 22 chr17 5913871 5914182 -83590371 - AluSp SINE Alu -8 305 1 271 295 0 0 chr17 5914826 5914931 -83589622 + (CAG)n Simple_repeat Simple_repeat 1 105 0 330 301 9 44 chr17 5914965 5915224 -83589329 + CT-rich Low_complexity Low_complexity 1 249 0 275 293 20 14 chr17 5915255 5915402 -83589151 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 5915788 5915838 -83588715 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 5916368 5916408 -83588145 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 5917138 5917274 -83587279 + MIR SINE MIR 40 188 -74 321 341 40 8 chr17 5919983 5920109 -83584444 - MIR SINE MIR -59 149 20 21 0 0 0 chr17 5924342 5924363 -83580190 + GC_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr17 5924493 5924533 -83580020 + GC_rich Low_complexity Low_complexity 1 40 0 2316 76 0 7 chr17 5929051 5929339 -83575214 - AluSc SINE Alu -23 286 1 1002 159 0 69 chr17 5929355 5929544 -83575009 - FRAM SINE Alu 0 176 1 440 218 61 75 chr17 5929546 5929693 -83574860 - MER5A DNA MER1_type 0 189 45 217 217 43 0 chr17 5929951 5929997 -83574556 - MIR SINE MIR -92 170 123 1764 133 13 53 chr17 5930449 5930750 -83573803 + AluJo SINE Alu 1 289 -23 2403 88 0 3 chr17 5930760 5931057 -83573496 + AluSx SINE Alu 1 296 -16 731 119 0 0 chr17 5931673 5931791 -83572762 + L1M LINE L1 5296 5413 -889 588 146 0 39 chr17 5931793 5931896 -83572657 + FLAM_A SINE Alu 40 138 -4 364 179 13 0 chr17 5931906 5931984 -83572569 + AluSp/q SINE Alu 225 303 0 2905 88 21 0 chr17 5931987 5932417 -83572136 + L1MA1 LINE L1 5755 6193 -109 2533 45 3 16 chr17 5932464 5932773 -83571780 + AluY SINE Alu 1 305 -6 992 133 0 0 chr17 5932942 5933077 -83571476 + AluSq/x SINE Alu 1 135 -178 2021 112 24 7 chr17 5933077 5933373 -83571180 + AluSg SINE Alu 1 301 -9 887 131 0 5 chr17 5933860 5934265 -83570288 + (CA)n Simple_repeat Simple_repeat 1 402 0 2061 93 29 0 chr17 5934551 5934831 -83569722 - AluSx SINE Alu -11 301 14 251 149 27 54 chr17 5934952 5935026 -83569527 + MLT1K LTR MaLR 188 259 -329 2623 44 0 0 chr17 5935329 5935627 -83568926 + AluY SINE Alu 5 302 -9 1036 154 5 53 chr17 5935627 5935815 -83568738 + AluSg/x SINE Alu 132 310 0 872 183 0 0 chr17 5935829 5935971 -83568582 + FLAM_C SINE Alu 1 142 -1 681 92 0 0 chr17 5935995 5936082 -83568471 + AluS SINE Alu 2 88 -225 188 143 24 0 chr17 5936524 5936566 -83567987 + GA-rich Low_complexity Low_complexity 5 47 0 2345 106 3 0 chr17 5936722 5937033 -83567520 + AluSx SINE Alu 1 312 0 2463 88 3 0 chr17 5937361 5937667 -83566886 + AluSx SINE Alu 1 307 -5 1284 174 9 30 chr17 5937679 5937909 -83566644 - AluJo SINE Alu -46 266 42 2144 103 16 19 chr17 5938019 5938329 -83566224 - AluSc SINE Alu 0 309 1 2078 115 61 0 chr17 5938344 5938639 -83565914 - AluSp SINE Alu 0 313 1 674 129 48 40 chr17 5938679 5938803 -83565750 + AluJo SINE Alu 11 135 -177 2188 113 27 0 chr17 5938832 5939125 -83565428 + AluSx SINE Alu 1 301 -11 183 407 50 29 chr17 5939260 5939400 -83565153 - L2 LINE L2 -92 3180 3038 1666 179 18 4 chr17 5939684 5939994 -83564559 - AluJb SINE Alu 0 314 1 2161 117 3 0 chr17 5940006 5940321 -83564232 - AluSx SINE Alu 0 316 1 1899 145 0 26 chr17 5940324 5940634 -83563919 - AluSx SINE Alu -10 302 1 254 216 39 0 chr17 5940649 5940700 -83563853 - MER66B LTR ERV1 -143 343 291 2738 203 71 50 chr17 5940734 5940776 -83563777 + L1MC4 LINE L1 7181 7221 -821 2233 81 7 42 chr17 5940776 5941084 -83563469 + AluSq SINE Alu 1 297 -16 2738 203 71 50 chr17 5941084 5941884 -83562669 + L1MC4 LINE L1 7221 8041 -1 1634 180 13 28 chr17 5941956 5942273 -83562280 - AluJb SINE Alu 0 312 1 279 275 72 14 chr17 5942293 5942431 -83562122 + L1ME LINE L1 5727 5872 -298 1682 148 35 4 chr17 5942433 5942689 -83561864 + AluSx SINE Alu 1 264 -48 1417 161 17 25 chr17 5943134 5943203 -83561350 + AluJo SINE Alu 52 120 -196 2314 101 0 0 chr17 5943203 5943500 -83561053 - AluSq SINE Alu -16 297 1 1417 161 17 25 chr17 5943500 5943697 -83560856 + AluJo SINE Alu 120 316 0 2158 113 3 0 chr17 5943884 5944202 -83560351 + AluSx SINE Alu 1 319 0 2236 85 41 10 chr17 5944266 5944560 -83559993 + AluSq SINE Alu 3 305 -8 246 304 43 0 chr17 5944564 5944725 -83559828 + L1M4 LINE L1 2271 2438 -3708 1465 222 96 36 chr17 5944728 5945202 -83559351 + MLT1D LTR MaLR 1 423 -5 483 326 34 6 chr17 5945204 5945379 -83559174 + L1M4 LINE L1 2435 2614 -3532 1667 173 61 0 chr17 5945457 5945735 -83558818 + AluJb SINE Alu 1 295 -17 967 129 58 7 chr17 5945772 5945927 -83558626 + AluJb SINE Alu 114 276 -36 1495 167 24 45 chr17 5945927 5945948 -83558605 - MLT2D LTR ERVL -25 389 369 183 100 0 0 chr17 5945948 5945978 -83558575 + (CA)n Simple_repeat Simple_repeat 2 31 0 1495 167 24 45 chr17 5945978 5946291 -83558262 - MLT2D LTR ERVL -45 369 62 1094 177 21 0 chr17 5946311 5946497 -83558056 - AluSg/x SINE Alu -1 311 122 497 142 19 47 chr17 5946497 5946603 -83557950 - L1MDa LINE L1 -6437 103 1 541 143 0 0 chr17 5946610 5946701 -83557852 - FLAM_A SINE Alu -2 140 50 453 93 0 53 chr17 5946763 5946838 -83557715 + MLT2C2 LTR ERVL 1 71 -393 2058 143 20 0 chr17 5946838 5947138 -83557415 + AluSx SINE Alu 1 306 -6 958 115 0 8 chr17 5947146 5947276 -83557277 + AluSq/x SINE Alu 1 129 -183 2399 97 7 0 chr17 5947277 5947587 -83556966 + AluSx SINE Alu 1 312 0 1223 150 0 0 chr17 5947644 5947824 -83556729 - AluSq SINE Alu 0 313 134 1532 159 29 84 chr17 5947824 5947981 -83556572 - AluJo SINE Alu -10 302 169 2620 52 0 13 chr17 5947981 5948288 -83556265 + AluY SINE Alu 1 303 -8 1532 159 29 84 chr17 5948288 5948439 -83556114 - AluJo SINE Alu -143 169 11 1964 177 7 49 chr17 5948464 5948589 -83555964 - L1PB4 LINE L1 0 6156 6027 2236 95 27 0 chr17 5948589 5948883 -83555670 - AluSx SINE Alu -10 302 1 1964 177 7 49 chr17 5948883 5949163 -83555390 - L1PB4 LINE L1 -129 6027 5768 2428 91 0 0 chr17 5949172 5949468 -83555085 - AluSx SINE Alu -16 296 1 881 171 0 38 chr17 5949479 5949637 -83554916 - FRAM SINE Alu -24 152 1 246 103 0 0 chr17 5949639 5949678 -83554875 - L1M2 LINE L1 -520 5780 5742 2348 90 3 3 chr17 5950105 5950404 -83554149 - AluSc SINE Alu -9 300 2 2989 9 0 0 chr17 5950422 5950740 -83553813 - AluYb8 SINE Alu 0 318 1 1913 136 3 53 chr17 5950772 5951144 -83553409 + AluJb SINE Alu 5 360 0 2254 76 9 54 chr17 5951167 5951483 -83553070 + AluSx SINE Alu 1 302 -10 4739 96 0 85 chr17 5951799 5952244 -83552309 - LTR8 LTR ERV1 -1 690 334 2389 85 7 0 chr17 5952244 5952551 -83552002 - AluSx SINE Alu -1 311 3 4739 96 0 85 chr17 5952551 5952859 -83551694 - LTR8 LTR ERV1 -357 334 1 875 167 0 0 chr17 5952887 5953025 -83551528 - AluJb SINE Alu -6 306 169 1603 163 4 4 chr17 5953025 5953271 -83551282 + AluJb SINE Alu 40 285 -27 2636 40 0 10 chr17 5953338 5953640 -83550913 - AluY SINE Alu -12 299 1 245 272 98 80 chr17 5953641 5953865 -83550688 + L1M4 LINE L1 3526 3753 -2393 2025 117 4 0 chr17 5953865 5954138 -83550415 + AluSp SINE Alu 1 274 -39 1221 124 119 0 chr17 5954139 5954341 -83550212 + AluSc SINE Alu 71 296 -13 227 271 0 21 chr17 5954664 5954712 -83549841 - L2 LINE L2 -196 3076 3030 1361 111 0 0 chr17 5955599 5955771 -83548782 + AluSq SINE Alu 1 172 -141 231 323 10 10 chr17 5955935 5956034 -83548519 + L1MC4a LINE L1 5755 5853 -1955 862 134 0 0 chr17 5956049 5956168 -83548385 - AluSp/q SINE Alu -19 294 176 1022 138 0 7 chr17 5956168 5956320 -83548233 - AluSg/x SINE Alu -8 304 154 274 143 0 0 chr17 5956320 5956362 -83548191 - Alu SINE Alu -266 42 1 270 191 12 36 chr17 5956364 5956448 -83548105 + L1MC4a LINE L1 5858 5939 -1869 1739 113 0 0 chr17 5956448 5956679 -83547874 + AluSx SINE Alu 1 231 -81 1495 141 0 0 chr17 5956780 5956993 -83547560 + AluSg/x SINE Alu 100 312 0 333 257 37 37 chr17 5957038 5957147 -83547406 + MIR SINE MIR 154 262 0 1871 148 16 29 chr17 5957268 5957578 -83546975 + AluSx SINE Alu 1 306 -6 2128 104 0 11 chr17 5957638 5957949 -83546604 + AluSx SINE Alu 1 308 0 915 91 0 0 chr17 5957972 5958082 -83546471 + AluSq/x SINE Alu 1 110 -202 452 240 70 75 chr17 5958183 5958334 -83546219 + L1ME LINE L1 5133 5284 -862 1797 149 67 0 chr17 5958334 5958602 -83545951 + AluSx SINE Alu 1 286 -26 452 240 70 75 chr17 5958602 5958650 -83545903 + L1ME LINE L1 5284 5331 -815 2551 71 0 0 chr17 5958651 5958962 -83545591 + AluY SINE Alu 1 311 0 1107 119 0 36 chr17 5958980 5959148 -83545405 + AluSg/x SINE Alu 144 305 -5 327 282 77 72 chr17 5959150 5959345 -83545208 + L1ME LINE L1 5325 5462 -700 825 183 0 0 chr17 5960225 5960362 -83544191 - FLAM_C SINE Alu -4 139 3 368 318 72 26 chr17 5960502 5960697 -83543856 + L1MC/D LINE L1 5372 5575 -2233 29 28 0 0 chr17 5960797 5960833 -83543720 + AT_rich Low_complexity Low_complexity 1 36 0 2046 138 0 0 chr17 5961288 5961614 -83542939 + AluSx SINE Alu 1 326 0 2320 92 3 7 chr17 5962147 5962439 -83542114 - AluSp SINE Alu -22 291 1 189 418 0 0 chr17 5962444 5962535 -83542018 - L2 LINE L2 -226 3046 2956 2389 84 7 7 chr17 5962712 5963021 -83541532 - AluY SINE Alu -2 309 1 1670 158 21 0 chr17 5963032 5963323 -83541230 - L1MB7 LINE L1 -6 6178 5882 189 366 117 24 chr17 5963325 5963623 -83540930 - L2 LINE L2 -568 2746 2421 297 213 98 41 chr17 5963887 5964009 -83540544 - MER103 DNA DNA -2 164 36 2643 44 0 0 chr17 5964259 5964555 -83539998 + AluY SINE Alu 1 296 -15 1326 79 129 10 chr17 5965102 5965304 -83539249 - MER30 DNA MER1_type 0 230 5 28 61 0 0 chr17 5965434 5965483 -83539070 + AT_rich Low_complexity Low_complexity 1 49 0 1829 162 3 24 chr17 5965674 5965970 -83538583 + AluJb SINE Alu 1 290 -22 311 298 53 7 chr17 5966043 5966194 -83538359 - L1ME LINE L1 -331 5790 5633 364 105 0 0 chr17 5966430 5966487 -83538066 + Alu SINE Alu 244 300 -2 375 187 60 84 chr17 5966529 5966695 -83537858 - MIR SINE MIR -9 253 92 185 347 92 52 chr17 5966738 5967064 -83537489 + L2 LINE L2 2820 3158 -114 814 171 0 0 chr17 5967208 5967337 -83537216 + AluJo/FLAM SINE Alu 5 133 -179 1751 171 10 14 chr17 5967340 5967632 -83536921 + AluJb SINE Alu 1 291 -21 436 316 37 18 chr17 5968656 5968874 -83535679 + L2 LINE L2 2596 2817 -497 1280 168 10 10 chr17 5969796 5970004 -83534549 + AluSg/x SINE Alu 87 294 -18 363 216 88 24 chr17 5970115 5970240 -83534313 - L1ME4a LINE L1 -27 6094 5962 1455 117 47 0 chr17 5970284 5970497 -83534056 - AluJb SINE Alu -5 307 85 2308 88 7 10 chr17 5970520 5970814 -83533739 - AluSg SINE Alu -17 293 1 339 251 53 37 chr17 5970815 5971002 -83533551 - L1ME4a LINE L1 -179 5942 5753 2045 129 10 0 chr17 5971015 5971309 -83533244 - AluSx SINE Alu -15 297 1 1148 204 40 42 chr17 5971363 5971716 -83532837 - MER74A LTR ERVL -63 495 144 1257 196 116 7 chr17 5972276 5972552 -83532001 - L1MB5 LINE L1 -1 6173 5868 374 297 254 20 chr17 5972552 5972601 -83531952 + L2 LINE L2 1963 1999 -1315 2299 61 0 0 chr17 5972601 5972896 -83531657 + AluY SINE Alu 1 295 -16 374 297 254 20 chr17 5972896 5973189 -83531364 + L2 LINE L2 1999 2385 -929 287 360 61 20 chr17 5973258 5973405 -83531148 + L2 LINE L2 3116 3268 -4 283 298 46 14 chr17 5974563 5974709 -83529844 - MIR SINE MIR -50 212 65 1973 124 10 0 chr17 5975533 5975840 -83528713 - AluSg SINE Alu 0 310 1 216 333 90 17 chr17 5976512 5976689 -83527864 - L2 LINE L2 -245 3027 2838 1824 79 86 11 chr17 5976772 5977052 -83527501 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr17 5977380 5977405 -83527148 + AT_rich Low_complexity Low_complexity 1 25 0 2325 222 100 39 chr17 5977861 5978713 -83525840 - L1ME3A LINE L1 0 6170 5267 2048 127 0 0 chr17 5978769 5979068 -83525485 - AluSx SINE Alu -13 299 1 243 0 0 0 chr17 5979293 5979320 -83525233 + (CA)n Simple_repeat Simple_repeat 2 28 0 2063 73 4 4 chr17 5979345 5979617 -83524936 - AluSg SINE Alu -38 272 1 2023 97 7 29 chr17 5979796 5980105 -83524448 - AluSq SINE Alu -11 302 1 1745 103 0 8 chr17 5980919 5981172 -83523381 + AluSg SINE Alu 45 295 -15 2267 91 7 0 chr17 5981740 5982047 -83522506 - AluSp SINE Alu -4 309 1 206 167 0 24 chr17 5982255 5982297 -83522256 + (TATG)n Simple_repeat Simple_repeat 4 44 0 958 262 121 32 chr17 5982308 5982811 -83521742 - L1MC4 LINE L1 -142 7900 7353 829 234 172 39 chr17 5982813 5983004 -83521549 - L1MC4a LINE L1 -1377 6431 6267 2406 62 0 0 chr17 5983004 5983312 -83521241 - AluY SINE Alu -1 310 3 829 234 172 39 chr17 5983312 5983585 -83520968 - L1MC4a LINE L1 -1541 6267 5905 502 291 21 121 chr17 5983704 5983993 -83520560 + L2 LINE L2 2996 3255 -17 1046 76 0 0 chr17 5984211 5984342 -83520211 + AluSg SINE Alu 1 131 -179 786 262 50 57 chr17 5984472 5984754 -83519799 - MLT2F LTR ERVL -367 296 17 1221 192 28 0 chr17 5984857 5985112 -83519441 + L1MD3 LINE L1 7734 7995 0 927 85 4 2 chr17 5985296 5985553 -83519000 + AluSq SINE Alu 1 313 0 2173 105 0 13 chr17 5986282 5986595 -83517958 + AluSx SINE Alu 1 309 -3 182 342 0 51 chr17 5987368 5987447 -83517106 + L3b LINE CR1 1433 1507 -76 261 0 0 0 chr17 5987670 5987699 -83516854 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 369 62 0 0 chr17 5987698 5987746 -83516807 + (CA)n Simple_repeat Simple_repeat 1 48 0 385 323 37 25 chr17 5987755 5987916 -83516637 + MIR SINE MIR 97 259 -3 297 256 136 48 chr17 5987964 5988089 -83516464 - MIR SINE MIR -74 188 53 217 167 0 30 chr17 5988796 5988862 -83515691 + GA-rich Low_complexity Low_complexity 2 65 0 263 226 17 52 chr17 5988871 5988986 -83515567 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 531 273 14 7 chr17 5989068 5989207 -83515346 - MIR SINE MIR 0 262 123 748 258 220 18 chr17 5989413 5989754 -83514799 + L2 LINE L2 2904 3313 0 1174 301 46 26 chr17 5990027 5990442 -83514111 + LTR16A LTR ERVL 21 443 -7 577 303 12 47 chr17 5990468 5990722 -83513831 - L3 LINE CR1 -163 1414 1170 315 267 48 38 chr17 5991916 5992021 -83512532 - L2 LINE L2 -12 3260 3155 475 266 57 0 chr17 5992188 5992312 -83512241 + Charlie8 DNA MER1_type 92 222 -2195 304 309 0 94 chr17 5992405 5992554 -83511999 - L2 LINE L2 -238 3034 2900 2156 114 3 7 chr17 5992675 5992983 -83511570 + AluSx SINE Alu 5 311 -1 2098 220 50 45 chr17 5993107 5993643 -83510910 - MLT1G1 LTR MaLR -5 590 52 1496 178 23 33 chr17 5993646 5994134 -83510419 + AluJo SINE Alu 1 485 0 1128 71 0 33 chr17 5993950 5994178 -83510375 + (GAAA)n Simple_repeat Simple_repeat 3 224 0 1166 290 6 9 chr17 5994204 5994525 -83510028 - L2 LINE L2 -1018 2296 1977 195 296 26 70 chr17 5994539 5994654 -83509899 - L2 LINE L2 -563 2751 2642 2188 88 0 0 chr17 5995131 5995425 -83509128 + AluY SINE Alu 1 294 -17 214 239 226 9 chr17 5996103 5996260 -83508293 + MIR SINE MIR 35 262 0 808 236 106 22 chr17 5996499 5996946 -83507607 - LTR33A LTR ERVL 0 523 2 503 301 162 27 chr17 5997467 5997832 -83506721 + L2 LINE L2 2900 3313 0 222 265 0 0 chr17 5997832 5997900 -83506653 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 230 336 35 0 chr17 5997914 5998027 -83506526 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 299 227 10 0 chr17 5998034 5998131 -83506422 + (TGGG)n Simple_repeat Simple_repeat 2 99 0 1306 224 33 15 chr17 5998559 5998889 -83505664 + MLT2C1 LTR ERVL 1 336 -61 374 119 0 15 chr17 5998893 5998960 -83505593 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 234 277 67 118 chr17 5999586 5999781 -83504772 - L2 LINE L2 -93 3179 2995 665 316 14 19 chr17 5999808 6000017 -83504536 - MIR SINE MIR -18 244 37 1723 175 3 0 chr17 6000046 6000331 -83504222 - AluJb SINE Alu -26 286 1 22 35 0 0 chr17 6000556 6000585 -83503968 + AT_rich Low_complexity Low_complexity 1 29 0 547 190 28 28 chr17 6000677 6000819 -83503734 + MER96B DNA MER1_type? 192 333 -84 418 330 19 39 chr17 6000897 6001103 -83503450 - L2 LINE L2 -433 2881 2680 2175 122 39 28 chr17 6001274 6001636 -83502917 + THE1C LTR MaLR 8 373 -2 2332 163 18 50 chr17 6002043 6002545 -83502008 + L1ME2 LINE L1 5677 6162 -2 1016 156 28 69 chr17 6002658 6002876 -83501677 + MER3 DNA MER1_type 1 209 0 263 369 63 0 chr17 6003091 6003202 -83501351 - HAL1 LINE L1 -1635 872 755 492 309 114 61 chr17 6003334 6003774 -83500779 - HAL1 LINE L1 -2044 463 1 369 290 30 38 chr17 6005407 6005538 -83499015 - MLT1J LTR MaLR -152 359 230 2200 98 0 0 chr17 6005538 6005835 -83498718 + AluY SINE Alu 1 297 -14 467 235 115 68 chr17 6005862 6006096 -83498457 - MLT1J LTR MaLR -257 254 10 213 389 0 8 chr17 6007724 6007850 -83496703 + (CA)n Simple_repeat Simple_repeat 1 125 0 2120 103 0 3 chr17 6008109 6008401 -83496152 + AluSx SINE Alu 1 291 -21 2065 166 133 33 chr17 6008445 6008903 -83495650 - MLT1D LTR MaLR -1 504 1 2086 111 13 0 chr17 6009018 6009325 -83495228 - AluSx SINE Alu -1 311 1 763 244 29 6 chr17 6009332 6009504 -83495049 + MIR SINE MIR 48 223 -39 251 273 55 9 chr17 6009859 6009969 -83494584 - MLT1G1-int LTR MaLR -1618 117 3 360 204 48 39 chr17 6009971 6010074 -83494479 - MLT1G1 LTR MaLR 0 549 446 461 274 0 0 chr17 6010207 6010309 -83494244 + MIR SINE MIR 45 146 -62 1874 125 36 0 chr17 6010311 6010592 -83493961 + AluJo SINE Alu 2 292 -20 736 262 4 42 chr17 6010971 6011208 -83493345 - MLT2F LTR ERVL 0 663 436 2905 195 84 14 chr17 6011222 6011317 -83493236 - MER63C DNA MER1_type -143 917 830 1748 134 42 18 chr17 6011317 6011601 -83492952 + AluSx SINE Alu 1 291 -21 2905 195 84 14 chr17 6011601 6012126 -83492427 - MER63C DNA MER1_type -230 830 254 1417 263 36 39 chr17 6012167 6012578 -83491975 - MLT2F LTR ERVL -237 426 17 254 193 0 53 chr17 6012661 6012718 -83491835 - MLT2F LTR ERVL -593 70 17 1264 249 75 48 chr17 6014421 6014803 -83489750 - MLT1G1 LTR MaLR -210 341 1 1882 156 10 0 chr17 6015074 6015369 -83489184 + AluSx SINE Alu 1 298 -14 1266 213 39 110 chr17 6015494 6015986 -83488567 - MLT2B1 LTR ERVL -62 458 2 275 277 116 18 chr17 6016244 6016356 -83488197 - L2 LINE L2 -18 3254 3132 2167 105 3 10 chr17 6016736 6017156 -83487397 - AluSx SINE Alu 0 418 1 565 272 52 28 chr17 6017223 6017401 -83487152 - MIR SINE MIR -33 229 44 2002 146 26 19 chr17 6017401 6017778 -83486775 - L1MA4 LINE L1 -6 6294 5915 565 272 52 28 chr17 6017778 6017812 -83486741 - MIR SINE MIR -218 44 12 791 142 80 40 chr17 6018292 6018468 -83486085 + MER96B DNA MER1_type? 1 183 -234 195 42 0 0 chr17 6018608 6018632 -83485921 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2145 103 0 3 chr17 6018668 6018970 -83485583 - AluSg SINE Alu -9 301 1 29 28 0 0 chr17 6019060 6019096 -83485457 + AT_rich Low_complexity Low_complexity 1 36 0 1570 295 108 49 chr17 6019136 6019332 -83485221 - L1M4c LINE L1 -2005 4141 3958 2486 24 3 3 chr17 6019332 6019626 -83484927 - AluY SINE Alu -17 294 1 1570 295 108 49 chr17 6019626 6020121 -83484432 - L1M4c LINE L1 -2188 3958 3493 2245 109 0 3 chr17 6020121 6020432 -83484121 - AluSx SINE Alu -2 310 1 1570 295 108 49 chr17 6020432 6021385 -83483168 - L1M4c LINE L1 -2653 3493 2400 2407 76 0 0 chr17 6021624 6021928 -83482625 - AluSg SINE Alu -6 304 1 21 95 0 0 chr17 6022078 6022141 -83482412 + AT_rich Low_complexity Low_complexity 1 63 0 280 211 7 145 chr17 6022471 6022557 -83481996 - L1M4c LINE L1 -781 1647 1551 189 0 0 0 chr17 6022557 6022578 -83481975 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1673 184 7 0 chr17 6022581 6022869 -83481684 - AluJb SINE Alu -22 290 1 280 211 7 145 chr17 6022869 6022930 -83481623 - L1M4c LINE L1 -879 1549 483 369 195 37 43 chr17 6023131 6023295 -83481258 + A-rich Low_complexity Low_complexity 2 164 0 235 173 15 68 chr17 6023457 6023590 -83480963 + (TAA)n Simple_repeat Simple_repeat 1 126 0 208 266 16 43 chr17 6023594 6023778 -83480775 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 291 134 60 67 chr17 6023677 6023811 -83480742 + (AATAG)n Simple_repeat Simple_repeat 5 137 0 364 305 83 50 chr17 6023835 6024137 -83480416 + L1MEd LINE L1 808 1119 -5000 413 294 16 16 chr17 6025001 6025127 -83479426 - FLAM_A SINE Alu -6 127 2 374 87 5 103 chr17 6025319 6025514 -83479039 + (TGGGGG)n Simple_repeat Simple_repeat 2 177 0 * 436 33 50 83 chr17 6025475 6025656 -83478897 + (GTGTG)n Simple_repeat Simple_repeat 4 178 0 357 96 60 42 chr17 6025681 6025848 -83478705 + (GGGTG)n Simple_repeat Simple_repeat 5 174 0 567 98 12 49 chr17 6025911 6026074 -83478479 + (TGGG)n Simple_repeat Simple_repeat 1 157 0 375 239 0 0 chr17 6026078 6026195 -83478358 + G-rich Low_complexity Low_complexity 1 117 0 2217 265 37 23 chr17 6026614 6027471 -83477082 - L1M4 LINE L1 -2147 3999 3131 1214 157 113 47 chr17 6029188 6029532 -83475021 + L1MB3 LINE L1 5816 6182 -1 296 275 75 6 chr17 6029780 6029940 -83474613 + L1ME LINE L1 5274 5444 -677 2168 122 3 0 chr17 6029944 6030248 -83474305 + AluSx SINE Alu 7 311 -1 1418 203 52 41 chr17 6030544 6030933 -83473620 + L1ME2 LINE L1 5755 6144 -20 1525 184 122 6 chr17 6031158 6031494 -83473059 + L1MC4 LINE L1 6529 6903 -1139 21 0 0 0 chr17 6031498 6031519 -83473034 + AT_rich Low_complexity Low_complexity 1 21 0 1465 177 3 46 chr17 6031522 6031805 -83472748 + AluJo SINE Alu 5 275 -37 623 280 160 6 chr17 6031868 6032193 -83472360 + L1ME LINE L1 5430 5804 -317 1492 193 0 11 chr17 6032269 6032539 -83472014 - AluJb SINE Alu -24 288 22 250 143 0 24 chr17 6032544 6032586 -83471967 - FAM SINE Alu -35 144 104 * 291 145 84 72 chr17 6032572 6032655 -83471898 - FAM SINE Alu -31 144 61 429 113 0 0 chr17 6032896 6032967 -83471586 + Alu SINE Alu 239 309 -1 2201 116 3 0 chr17 6035085 6035386 -83469167 - AluSx SINE Alu -10 302 1 21 57 0 0 chr17 6036768 6036803 -83467750 + AT_rich Low_complexity Low_complexity 1 35 0 710 140 18 0 chr17 6036803 6036917 -83467636 - FLAM_C SINE Alu -26 117 2 201 317 39 29 chr17 6037510 6037614 -83466939 - L2 LINE L2 -240 3032 2928 2219 109 0 3 chr17 6037694 6037987 -83466566 - AluSq SINE Alu -21 292 1 328 316 59 33 chr17 6038297 6038449 -83466104 - MER5B DNA MER1_type -22 156 1 23 0 0 0 chr17 6039662 6039685 -83464868 + GC_rich Low_complexity Low_complexity 1 23 0 681 181 0 0 chr17 6040571 6040676 -83463877 + AluSg/x SINE Alu 146 250 -62 1288 159 0 26 chr17 6040676 6040908 -83463645 + AluJb SINE Alu 85 310 -2 2147 135 3 0 chr17 6040972 6041275 -83463278 - AluSx SINE Alu -8 304 1 975 266 54 43 chr17 6041275 6041624 -83462929 - MER67C LTR ERV1 -201 509 157 1155 170 35 25 chr17 6043321 6043521 -83461032 - AluJo SINE Alu -25 287 86 746 234 177 54 chr17 6044378 6044616 -83459937 + MLT1D LTR MaLR 1 258 -132 2388 86 3 3 chr17 6044616 6044917 -83459636 + AluSx SINE Alu 1 301 -11 746 234 177 54 chr17 6044917 6045069 -83459484 + MLT1D LTR MaLR 258 390 0 2050 125 10 7 chr17 6045697 6046001 -83458552 + AluSx SINE Alu 1 305 -7 850 173 0 37 chr17 6046001 6046151 -83458402 + AluSg/x SINE Alu 134 288 -24 279 0 0 0 chr17 6046151 6046182 -83458371 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1856 160 0 10 chr17 6046182 6046482 -83458071 + AluJb SINE Alu 2 298 -14 2389 211 49 42 chr17 6046496 6047066 -83457487 + L1M4 LINE L1 3750 4327 -1819 1818 168 0 7 chr17 6047066 6047363 -83457190 - AluJo SINE Alu -17 295 1 2389 211 49 42 chr17 6047363 6047485 -83457068 + L1M4 LINE L1 4327 4447 -1699 264 108 0 0 chr17 6047488 6047525 -83457028 - THE1B LTR MaLR 0 364 328 1126 194 0 0 chr17 6047525 6047742 -83456811 + L1M4 LINE L1 4591 4807 -1339 859 144 0 0 chr17 6047754 6047872 -83456681 + AluSq/x SINE Alu 1 118 -194 1222 123 0 0 chr17 6047908 6048078 -83456475 - AluSg/x SINE Alu -12 298 129 869 162 7 7 chr17 6048090 6048238 -83456315 - AluYa5 SINE Alu -30 281 134 944 151 0 7 chr17 6048731 6048904 -83455649 - AluJb SINE Alu 0 311 140 2258 102 7 3 chr17 6048917 6049220 -83455333 - AluSx SINE Alu -8 304 1 302 252 26 52 chr17 6049554 6049669 -83454884 - L1ME LINE L1 -309 5855 5744 2158 120 3 0 chr17 6050073 6050365 -83454188 + AluSx SINE Alu 1 293 -19 1870 134 13 17 chr17 6051503 6051801 -83452752 - AluSx SINE Alu -15 297 1 755 161 35 0 chr17 6052270 6052413 -83452140 - L1MB7 LINE L1 -10 6174 6027 432 0 0 0 chr17 6052437 6052485 -83452068 + (CA)n Simple_repeat Simple_repeat 2 49 0 826 189 47 11 chr17 6052487 6052677 -83451876 - L1MB8 LINE L1 -140 6038 5842 1549 133 12 8 chr17 6052820 6053061 -83451492 - AluSx SINE Alu -16 296 55 2075 96 0 77 chr17 6053183 6053371 -83451182 - AluSx SINE Alu -13 299 145 2120 113 3 28 chr17 6053371 6053689 -83450864 - AluSg SINE Alu 0 310 1 2075 96 0 77 chr17 6053689 6053824 -83450729 - AluSx SINE Alu -167 145 1 189 107 0 0 chr17 6053843 6053871 -83450682 + (T)n Simple_repeat Simple_repeat 1 28 0 1574 154 0 55 chr17 6054157 6054469 -83450084 + AluJb SINE Alu 1 295 -17 1543 128 128 12 chr17 6054610 6054886 -83449667 - AluSg SINE Alu 0 308 4 891 175 6 47 chr17 6054922 6055093 -83449460 + FRAM SINE Alu 1 164 -2 203 299 52 13 chr17 6055351 6055428 -83449125 + L2 LINE L2 3193 3272 0 2350 79 10 7 chr17 6056268 6056573 -83447980 - AluSp SINE Alu -7 306 1 214 272 72 24 chr17 6058115 6058240 -83446313 + L2 LINE L2 1632 1762 -1552 263 313 0 0 chr17 6058792 6058856 -83445697 + L2 LINE L2 3020 3083 -189 2291 108 0 0 chr17 6060831 6061127 -83443426 - AluSx SINE Alu -14 298 3 2084 137 0 10 chr17 6061214 6061513 -83443040 + AluSx SINE Alu 1 296 -16 943 144 0 60 chr17 6061520 6061687 -83442866 + AluSq SINE Alu 136 292 -21 23 0 0 0 chr17 6061716 6061739 -83442814 + AT_rich Low_complexity Low_complexity 1 23 0 2245 110 0 7 chr17 6066740 6067048 -83437505 - AluSx SINE Alu -6 306 1 2074 106 11 11 chr17 6067052 6067335 -83437218 - AluY SINE Alu -28 283 1 241 233 35 47 chr17 6067835 6067921 -83436632 - MARNA DNA Mariner -76 510 426 2341 103 7 0 chr17 6068243 6068543 -83436010 + AluSx SINE Alu 1 302 -10 2376 87 7 0 chr17 6068631 6068929 -83435624 + AluSx SINE Alu 1 300 -12 1498 142 120 29 chr17 6069447 6069722 -83434831 - AluJo SINE Alu -12 300 1 372 282 77 45 chr17 6069769 6070023 -83434530 + MIR SINE MIR 1 258 -4 283 179 73 113 chr17 6071310 6071461 -83433092 - L1ME3 LINE L1 -78 6084 5940 1770 148 17 44 chr17 6071548 6071703 -83432850 - AluJb SINE Alu -23 289 144 2274 90 3 17 chr17 6071703 6072002 -83432551 - AluSg SINE Alu -15 295 1 1770 148 17 44 chr17 6072002 6072143 -83432410 - AluJb SINE Alu -168 144 1 2211 122 0 3 chr17 6072178 6072481 -83432072 - AluSg SINE Alu -6 304 3 935 290 78 31 chr17 6072675 6073164 -83431389 - L2 LINE L2 -836 2478 1967 497 324 66 28 chr17 6073174 6073398 -83431155 - L2 LINE L2 -67 3205 2966 225 0 0 0 chr17 6073398 6073423 -83431130 + (CTGGGG)n Simple_repeat Simple_repeat 1 25 0 497 324 66 28 chr17 6073423 6073485 -83431068 - L2 LINE L2 -306 2966 2908 1132 143 16 108 chr17 6074016 6074274 -83430279 - MER46A DNA MER2_type -1 235 2 1757 127 46 3 chr17 6074282 6074565 -83429988 - AluSx SINE Alu -17 295 1 3574 170 46 43 chr17 6074567 6074675 -83429878 - L1MB8 LINE L1 -5 6173 6067 2103 106 0 3 chr17 6074675 6074968 -83429585 + AluSq SINE Alu 1 292 -21 3574 170 46 43 chr17 6074968 6075666 -83428887 - L1MB8 LINE L1 -111 6067 5365 372 198 124 8 chr17 6075684 6075805 -83428748 - L1MB8 LINE L1 -863 5283 5149 1724 164 0 7 chr17 6075805 6076098 -83428455 + AluJb SINE Alu 1 291 -21 1300 224 119 17 chr17 6076105 6076458 -83428095 + MLT1D LTR MaLR 115 503 -2 471 199 14 55 chr17 6076463 6076609 -83427944 - L1MB8 LINE L1 -2091 4055 3916 1835 121 32 38 chr17 6076636 6076950 -83427603 - AluSx SINE Alu 0 312 1 2087 103 3 7 chr17 6077037 6077338 -83427215 - AluSx SINE Alu -12 300 1 2146 84 7 17 chr17 6077342 6077638 -83426915 - AluSc SINE Alu -16 293 1 2362 63 0 10 chr17 6077638 6077938 -83426615 - AluY SINE Alu -14 297 1 180 0 0 0 chr17 6077938 6077958 -83426595 + (T)n Simple_repeat Simple_repeat 1 20 0 451 236 48 34 chr17 6077982 6078262 -83426291 - L1MB8 LINE L1 -2708 3438 3120 1084 158 32 50 chr17 6078589 6078810 -83425743 - Tigger1 DNA MER2_type 0 2418 2202 572 169 127 28 chr17 6078799 6078941 -83425612 - Tigger1 DNA MER2_type -2261 157 2 * 2289 76 10 0 chr17 6078964 6079265 -83425288 + AluSg SINE Alu 1 304 -6 30 0 0 0 chr17 6079813 6079843 -83424710 + AT_rich Low_complexity Low_complexity 1 30 0 2194 88 7 0 chr17 6079849 6080146 -83424407 + AluSp SINE Alu 1 299 -14 1950 129 33 0 chr17 6080782 6081085 -83423468 + AluSp SINE Alu 1 313 0 181 225 113 14 chr17 6081172 6081243 -83423310 + MIR3 SINE MIR 100 177 -31 1066 144 18 140 chr17 6081420 6081469 -83423084 - L1MA5 LINE L1 -450 5850 5797 1501 182 52 0 chr17 6081469 6081738 -83422815 + AluJb SINE Alu 1 283 -19 1066 144 18 140 chr17 6081738 6081806 -83422747 - L1MA5 LINE L1 -503 5797 5722 1686 136 3 48 chr17 6081806 6081944 -83422609 + AluSx SINE Alu 1 144 -161 2144 108 0 3 chr17 6081944 6082251 -83422302 + AluSg SINE Alu 2 307 -3 1686 136 3 48 chr17 6082251 6082430 -83422123 + AluSx SINE Alu 144 305 0 1066 144 18 140 chr17 6082430 6082595 -83421958 - L1MA5 LINE L1 -578 5722 5601 2208 105 0 3 chr17 6083078 6083392 -83421161 + AluSq SINE Alu 1 313 0 192 304 139 13 chr17 6083725 6083804 -83420749 - L2 LINE L2 -18 3254 3166 302 319 173 34 chr17 6084128 6084158 -83420395 + L2 LINE L2 1798 1822 -1492 917 164 41 55 chr17 6084158 6084377 -83420176 + MER20 DNA MER1_type 3 218 -1 302 319 173 34 chr17 6084377 6084791 -83419762 + L2 LINE L2 1822 2304 -1010 1191 106 156 0 chr17 6085418 6085512 -83419041 + MER30 DNA MER1_type 1 79 -151 195 42 0 0 chr17 6085512 6085536 -83419017 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1191 106 156 0 chr17 6085536 6085640 -83418913 + MER30 DNA MER1_type 79 230 0 185 330 11 78 chr17 6087012 6087191 -83417362 + L2 LINE L2 3030 3196 -76 486 278 88 78 chr17 6087714 6087839 -83416714 + L1ME4a LINE L1 5718 5840 -281 2480 69 0 0 chr17 6087839 6088144 -83416409 + AluSq SINE Alu 1 305 -8 486 278 88 78 chr17 6088144 6088324 -83416229 + L1ME4a LINE L1 5840 6026 -95 1033 273 145 26 chr17 6088331 6088916 -83415637 - L2 LINE L2 -9 3304 2661 753 117 8 17 chr17 6089205 6089325 -83415228 + AluJb SINE Alu 11 129 -183 209 364 53 30 chr17 6089886 6090018 -83414535 + L2 LINE L2 3133 3267 -5 2240 88 0 52 chr17 6090029 6090358 -83414195 + AluSx SINE Alu 1 312 0 310 98 0 0 chr17 6091145 6091186 -83413367 + Tigger7 DNA MER2_type 227 267 -466 * 444 167 0 83 chr17 6091184 6091280 -83413273 + Tigger7 DNA MER2_type 2489 2576 -11 1178 164 45 0 chr17 6091818 6092019 -83412534 - AluJb SINE Alu -102 210 1 336 330 40 17 chr17 6092283 6092459 -83412094 - MIR3 SINE MIR -9 199 20 2084 102 3 3 chr17 6092948 6093242 -83411311 - AluSp SINE Alu -19 294 1 1697 129 19 0 chr17 6093387 6093643 -83410910 + AluSx SINE Alu 1 261 -51 590 100 0 0 chr17 6093646 6093726 -83410827 + AluSg/x SINE Alu 212 291 -18 39 0 0 0 chr17 6093726 6093765 -83410788 + AT_rich Low_complexity Low_complexity 1 39 0 1859 146 3 3 chr17 6093765 6094067 -83410486 - AluSx SINE Alu -10 302 1 309 289 51 64 chr17 6094146 6094302 -83410251 - MIR SINE MIR -50 212 59 248 86 224 52 chr17 6094378 6094436 -83410117 - Tigger5 DNA MER2_type -5 2318 2251 * 323 182 0 0 chr17 6094405 6094460 -83410093 - Tigger5 DNA MER2_type -2268 55 1 446 117 0 0 chr17 6094482 6094542 -83410011 + Tigger5 DNA MER2_type 2264 2323 0 2346 95 0 0 chr17 6094610 6094914 -83409639 + AluSx SINE Alu 1 304 -8 222 37 0 0 chr17 6094928 6094955 -83409598 + (CA)n Simple_repeat Simple_repeat 2 28 0 1317 163 47 57 chr17 6095580 6095881 -83408672 - AluJb SINE Alu -3 299 2 898 164 0 44 chr17 6096049 6096232 -83408321 + AluJb SINE Alu 125 299 -13 260 225 67 67 chr17 6096256 6096304 -83408249 - L2 LINE L2 -85 3228 3181 1833 142 0 0 chr17 6096304 6096605 -83407948 + AluSx SINE Alu 1 301 0 2174 91 7 13 chr17 6096607 6096915 -83407638 + AluSq SINE Alu 1 306 -7 260 225 67 67 chr17 6096915 6096951 -83407602 - L2 LINE L2 -132 3181 3140 2094 91 7 0 chr17 6097013 6097299 -83407254 - AluSx SINE Alu -24 288 1 262 303 64 9 chr17 6097766 6097875 -83406678 + L2 LINE L2 3023 3137 -176 269 253 72 24 chr17 6098676 6098759 -83405794 + L2 LINE L2 2275 2361 -953 796 234 112 0 chr17 6099503 6099700 -83404853 - MER20 DNA MER1_type 0 219 1 196 300 0 0 chr17 6100468 6100518 -83404035 - MER5A DNA MER1_type -59 130 81 1580 107 37 12 chr17 6100546 6100789 -83403764 - AluSx SINE Alu -17 295 47 347 306 116 16 chr17 6100885 6101006 -83403547 + MIR SINE MIR 18 150 -58 361 335 64 6 chr17 6101077 6101250 -83403303 - MIR SINE MIR 0 262 80 253 281 37 12 chr17 6101867 6101949 -83402604 - MIR SINE MIR -171 91 8 1527 170 22 58 chr17 6101977 6102288 -83402265 + AluJo SINE Alu 3 302 0 1081 132 42 0 chr17 6102505 6102672 -83401881 - AluJ SINE Alu -10 302 129 22 0 0 0 chr17 6102672 6102694 -83401859 + AT_rich Low_complexity Low_complexity 1 22 0 1718 166 0 17 chr17 6102726 6103028 -83401525 - AluJb SINE Alu -3 309 13 819 170 7 27 chr17 6103030 6103177 -83401376 - AluJ SINE Alu -167 145 2 386 305 114 0 chr17 6103182 6103313 -83401240 + MIR SINE MIR 117 262 0 * 607 295 163 18 chr17 6103301 6103528 -83401025 + MIR SINE MIR 1 260 -2 811 219 14 0 chr17 6103742 6103888 -83400665 - MER58B DNA MER1_type 0 341 194 253 234 252 47 chr17 6103901 6104008 -83400545 + L2 LINE L2 3142 3270 -2 2139 96 7 7 chr17 6104080 6104383 -83400170 - AluSx SINE Alu -9 303 1 723 218 0 0 chr17 6105127 6105251 -83399302 - MER63A DNA MER1_type -37 173 50 2212 89 0 10 chr17 6105387 6105689 -83398864 - AluSg SINE Alu -11 299 1 2252 94 0 0 chr17 6105881 6106178 -83398375 - AluSx SINE Alu -10 302 6 189 171 0 0 chr17 6107501 6107536 -83397017 + (TATG)n Simple_repeat Simple_repeat 2 36 0 384 282 26 34 chr17 6108189 6108306 -83396247 - MIR3 SINE MIR -78 130 15 208 240 73 62 chr17 6108420 6108516 -83396037 + L2 LINE L2 2860 2956 -316 2148 101 0 0 chr17 6108633 6108920 -83395633 + AluSx SINE Alu 1 287 -25 2179 112 0 6 chr17 6108930 6109243 -83395310 + AluSq SINE Alu 1 311 -2 1814 155 7 0 chr17 6109952 6110248 -83394305 + AluSx SINE Alu 1 298 -14 869 85 78 0 chr17 6110620 6110749 -83393804 - MER85 DNA T2_type 0 139 1 252 301 92 46 chr17 6112701 6112874 -83391679 + MIR3 SINE MIR 21 201 -7 2369 59 0 0 chr17 6113212 6113501 -83391052 - AluSc SINE Alu -8 301 13 2160 76 0 57 chr17 6114495 6114812 -83389741 + AluSc SINE Alu 1 299 -10 931 177 61 140 chr17 6115106 6115485 -83389068 + L1MB7 LINE L1 4960 5308 -838 1855 92 42 0 chr17 6115489 6115751 -83388802 + AluSg SINE Alu 5 277 -33 1097 211 50 18 chr17 6115765 6116044 -83388509 + L1MB7 LINE L1 5897 6184 0 1591 126 89 0 chr17 6116085 6116356 -83388197 - AluSg SINE Alu -13 297 3 1639 103 63 16 chr17 6118206 6118458 -83386095 + MER21A LTR ERV1 1 264 -667 2959 147 75 10 chr17 6118465 6118983 -83385570 + MER21A LTR ERV1 378 929 -2 1191 191 108 0 chr17 6119254 6119495 -83385058 + MER21B LTR ERV1 292 558 -305 1758 140 24 10 chr17 6120633 6120925 -83383628 - AluSx SINE Alu -1 311 16 518 48 0 0 chr17 6120925 6120988 -83383565 - AluY SINE Alu -247 64 2 225 0 0 0 chr17 6120998 6121023 -83383530 + (T)n Simple_repeat Simple_repeat 1 25 0 187 211 225 0 chr17 6121637 6121708 -83382845 - MIR3 SINE MIR -15 193 107 298 149 15 90 chr17 6121798 6121865 -83382688 + U7 snRNA snRNA 1 62 -1 414 273 77 28 chr17 6122588 6122731 -83381822 - MIR SINE MIR -36 226 77 2476 87 0 0 chr17 6123817 6124126 -83380427 - AluSx SINE Alu -3 309 1 1891 152 0 24 chr17 6124729 6125026 -83379527 - AluSx SINE Alu -22 290 1 197 265 0 0 chr17 6125044 6125093 -83379460 + L2 LINE L2 2997 3045 -227 491 246 16 0 chr17 6125129 6125251 -83379302 + MIR SINE MIR 62 185 -77 191 247 86 37 chr17 6125297 6125378 -83379175 + MIR SINE MIR 178 262 0 1073 83 0 0 chr17 6125983 6126116 -83378437 + AluSq/x SINE Alu 1 133 -179 1961 80 109 11 chr17 6126120 6126395 -83378158 + AluSc SINE Alu 1 302 -7 2232 84 0 52 chr17 6126644 6126975 -83377578 + AluSx SINE Alu 1 315 0 449 214 65 54 chr17 6127073 6127241 -83377312 + L1ME4a LINE L1 5952 6121 0 21 82 0 0 chr17 6127319 6127368 -83377185 + AT_rich Low_complexity Low_complexity 1 49 0 649 192 146 0 chr17 6127700 6127830 -83376723 - FRAM SINE Alu -30 146 1 349 226 88 38 chr17 6128002 6128161 -83376392 + L1ME LINE L1 5210 5376 -770 2194 120 0 16 chr17 6128176 6128484 -83376069 - AluSx SINE Alu -9 303 1 291 267 38 19 chr17 6128546 6128651 -83375902 + MIR SINE MIR 137 243 -19 2158 120 3 0 chr17 6129860 6130152 -83374401 - AluSx SINE Alu -19 293 1 302 252 26 52 chr17 6130556 6130671 -83373882 + L1ME LINE L1 5744 5855 -309 2301 102 3 3 chr17 6131005 6131309 -83373244 + AluSx SINE Alu 1 304 -8 945 151 0 7 chr17 6131322 6131495 -83373058 + AluJb SINE Alu 140 311 0 869 112 77 7 chr17 6132001 6132144 -83372409 + FAM SINE Alu 12 164 -21 438 231 56 0 chr17 6133017 6133125 -83371428 + MER81 DNA DNA 1 114 0 332 283 99 24 chr17 6134244 6134456 -83370097 + MIR SINE MIR 23 250 -12 328 170 0 19 chr17 6135112 6135353 -83369200 + AluJo SINE Alu 1 301 -1 2186 78 0 4 chr17 6135804 6136074 -83368479 + AluSx SINE Alu 33 301 -11 1897 141 57 0 chr17 6136088 6136371 -83368182 + AluSx SINE Alu 1 299 -13 37 81 0 0 chr17 6136383 6136469 -83368084 + AT_rich Low_complexity Low_complexity 1 86 0 296 261 33 11 chr17 6136795 6136887 -83367666 + HAL1 LINE L1 324 417 -2090 242 269 19 39 chr17 6136907 6137011 -83367542 + HAL1 LINE L1 1802 1903 -604 608 230 0 0 chr17 6137214 6137340 -83367213 + FLAM_A SINE Alu 1 126 -7 265 285 78 66 chr17 6137418 6137660 -83366893 + HAL1 LINE L1 2263 2507 0 1760 174 3 7 chr17 6137663 6137950 -83366603 + AluJo SINE Alu 1 286 -26 24 32 0 0 chr17 6137954 6137985 -83366568 + AT_rich Low_complexity Low_complexity 1 31 0 1836 152 24 7 chr17 6138187 6138477 -83366076 - AluJo SINE Alu -17 295 1 930 138 7 22 chr17 6138556 6138694 -83365859 - AluJo SINE Alu -176 136 1 255 219 67 92 chr17 6138696 6138763 -83365790 - MER112 DNA MER1_type -144 116 52 2442 81 0 0 chr17 6138763 6139061 -83365492 - AluY SINE Alu -13 298 1 255 219 67 92 chr17 6139061 6139112 -83365441 - MER112 DNA MER1_type -208 52 1 2406 92 0 0 chr17 6139251 6139554 -83364999 - AluSx SINE Alu -9 303 1 2151 76 42 21 chr17 6140081 6140369 -83364184 + AluY SINE Alu 3 296 -15 1553 92 0 5 chr17 6140390 6140596 -83363957 - AluSx SINE Alu -107 205 1 2542 76 0 0 chr17 6140684 6140987 -83363566 - AluSx SINE Alu -9 303 1 387 261 14 70 chr17 6141309 6141451 -83363102 - L2 LINE L2 0 3272 3139 2142 96 17 14 chr17 6141545 6141837 -83362716 + AluSg SINE Alu 1 293 -17 1821 163 16 3 chr17 6142486 6142793 -83361760 + AluJo SINE Alu 1 311 -1 1794 171 20 0 chr17 6142801 6143099 -83361454 + AluJb SINE Alu 1 304 -8 656 269 29 43 chr17 6143146 6143425 -83361128 + L1ME LINE L1 5478 5752 -369 184 333 51 0 chr17 6144116 6144194 -83360359 + L2 LINE L2 1106 1187 -2127 894 195 32 45 chr17 6144194 6144415 -83360138 - MER46A DNA MER2_type -17 219 2 1435 179 113 31 chr17 6144843 6145162 -83359391 + MER47A DNA MER2_type 20 364 -2 3130 124 0 0 chr17 6145309 6145760 -83358793 + LTR19A-int LTR ERV1 2526 2976 -2039 3072 63 8 0 chr17 6145787 6146166 -83358387 + LTR19A-int LTR ERV1 5205 5586 0 2304 142 28 73 chr17 6146166 6146675 -83357878 + LTR19A LTR ERV1 1 486 0 2486 60 3 10 chr17 6147924 6148238 -83356315 - AluSp SINE Alu -1 312 1 185 176 0 141 chr17 6148370 6148455 -83356098 - MIR SINE MIR -74 188 116 397 246 153 16 chr17 6149310 6149493 -83355060 - Charlie8 DNA MER1_type -2164 253 46 253 246 146 27 chr17 6150026 6150136 -83354417 + LTR11 LTR ERV 345 467 -217 218 209 0 0 chr17 6150389 6150432 -83354121 - L2 LINE L2 -557 2757 2715 225 146 0 0 chr17 6152368 6152416 -83352137 + (A)n Simple_repeat Simple_repeat 1 48 0 927 115 0 23 chr17 6152417 6152547 -83352006 + FLAM_C SINE Alu 1 127 -16 26 50 0 0 chr17 6152547 6152587 -83351966 + AT_rich Low_complexity Low_complexity 1 40 0 287 168 158 42 chr17 6153911 6154006 -83350547 + L1MB3 LINE L1 5694 5799 -384 2377 83 3 3 chr17 6154006 6154306 -83350247 - AluSx SINE Alu -12 300 1 1411 117 10 15 chr17 6154306 6154511 -83350042 + AluSg/x SINE Alu 94 297 -13 1627 100 118 42 chr17 6154511 6154841 -83349712 + L1MB3 LINE L1 5828 6182 -1 327 269 75 6 chr17 6155089 6155249 -83349304 + L1ME LINE L1 5274 5444 -677 2229 114 3 0 chr17 6155250 6155557 -83348996 + AluSx SINE Alu 4 311 -1 1418 203 52 41 chr17 6155853 6156242 -83348311 + L1ME2 LINE L1 5755 6144 -20 1518 197 106 6 chr17 6156473 6156803 -83347750 + L1MC4 LINE L1 6541 6903 -1139 21 0 0 0 chr17 6156807 6156828 -83347725 + AT_rich Low_complexity Low_complexity 1 21 0 1567 166 0 46 chr17 6156831 6157115 -83347438 + AluJo SINE Alu 5 275 -37 591 286 160 6 chr17 6157178 6157503 -83347050 + L1ME LINE L1 5430 5804 -317 1697 180 0 0 chr17 6157579 6157846 -83346707 - AluJb SINE Alu -24 288 22 250 143 0 24 chr17 6157851 6157893 -83346660 - FAM SINE Alu -35 144 104 * 291 145 84 72 chr17 6157879 6157962 -83346591 - FAM SINE Alu -31 144 61 414 113 0 0 chr17 6158203 6158274 -83346279 + Alu SINE Alu 240 310 -1 2178 117 3 0 chr17 6160395 6160694 -83343859 - AluSg SINE Alu -10 300 1 21 57 0 0 chr17 6162076 6162111 -83342442 + AT_rich Low_complexity Low_complexity 1 35 0 710 140 18 0 chr17 6162111 6162225 -83342328 - FLAM_C SINE Alu -26 117 2 201 317 39 29 chr17 6162818 6162922 -83341631 - L2 LINE L2 -240 3032 2928 2295 96 0 3 chr17 6163002 6163295 -83341258 - AluSq SINE Alu -21 292 1 328 316 59 33 chr17 6163605 6163757 -83340796 - MER5B DNA MER1_type -22 156 1 23 0 0 0 chr17 6164966 6164989 -83339564 + GC_rich Low_complexity Low_complexity 1 23 0 681 181 0 0 chr17 6165874 6165979 -83338574 + AluSg/x SINE Alu 146 250 -62 1248 168 0 26 chr17 6165979 6166211 -83338342 + AluJb SINE Alu 85 310 -2 2166 132 3 0 chr17 6166275 6166578 -83337975 - AluSx SINE Alu -8 304 1 1025 266 51 43 chr17 6166578 6166928 -83337625 - MER67C LTR ERV1 -201 509 157 189 308 206 39 chr17 6166954 6167314 -83337239 - L2 LINE L2 -2231 1083 664 1155 170 35 25 chr17 6168625 6168825 -83335728 - AluJo SINE Alu -25 287 86 693 226 242 28 chr17 6169677 6169915 -83334638 + MLT1D LTR MaLR 1 187 -280 2391 92 3 3 chr17 6169915 6170220 -83334333 + AluSx SINE Alu 1 305 -7 693 226 242 28 chr17 6170220 6170372 -83334181 + MLT1D LTR MaLR 187 467 0 1977 142 10 3 chr17 6170998 6171301 -83333252 + AluSx SINE Alu 1 305 -7 869 171 0 49 chr17 6171301 6171451 -83333102 + AluSg/x SINE Alu 132 288 -22 243 0 0 0 chr17 6171451 6171478 -83333075 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1880 156 0 10 chr17 6171478 6171779 -83332774 + AluJb SINE Alu 2 299 -13 869 171 0 49 chr17 6171779 6171791 -83332762 + AluSg/x SINE Alu 286 287 -23 3299 219 104 66 chr17 6171795 6172365 -83332188 + L1M4 LINE L1 3750 4297 -1849 1832 168 0 7 chr17 6172365 6172662 -83331891 - AluJb SINE Alu -17 295 1 3299 219 104 66 chr17 6172662 6172787 -83331766 + L1M4 LINE L1 4297 4416 -1730 264 108 0 0 chr17 6172787 6172824 -83331729 - THE1B LTR MaLR 0 364 328 3299 219 104 66 chr17 6172824 6173053 -83331500 + L1M4 LINE L1 4416 4635 -1511 2223 123 0 22 chr17 6173053 6173371 -83331182 + AluSx SINE Alu 1 311 -1 3299 219 104 66 chr17 6173371 6173885 -83330668 + L1M4 LINE L1 4635 5283 -863 1975 115 25 4 chr17 6173888 6174166 -83330387 + AluSx SINE Alu 2 285 -27 181 0 0 0 chr17 6174166 6174186 -83330367 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1202 179 0 0 chr17 6174186 6174382 -83330171 + AluJb SINE Alu 111 306 -6 618 160 40 8 chr17 6174382 6174507 -83330046 + L1MB8 LINE L1 6049 6177 -1 710 204 119 6 chr17 6174507 6174683 -83329870 + MIR SINE MIR 19 214 -48 258 283 33 0 chr17 6174715 6174775 -83329778 + L2 LINE L2 3157 3218 -54 2196 95 10 23 chr17 6174812 6175117 -83329436 + AluSp SINE Alu 1 301 -12 719 203 8 8 chr17 6175555 6175688 -83328865 - FLAM_A SINE Alu 0 133 1 2113 122 3 7 chr17 6176501 6176795 -83327758 + AluSx SINE Alu 1 293 -19 782 147 0 0 chr17 6176795 6176911 -83327642 + AluSc SINE Alu 132 247 -62 225 94 0 0 chr17 6176912 6176944 -83327609 + (A)n Simple_repeat Simple_repeat 1 32 0 271 276 62 53 chr17 6177509 6177752 -83326801 - L1MEd LINE L1 -4894 1225 981 21 0 0 0 chr17 6177962 6177983 -83326570 + AT_rich Low_complexity Low_complexity 1 21 0 2297 112 0 0 chr17 6178784 6179078 -83325475 + AluSx SINE Alu 1 294 -18 350 287 19 9 chr17 6179114 6179222 -83325331 + MIR SINE MIR 154 262 0 3593 115 32 2 chr17 6179261 6179816 -83324737 + LTR26 LTR ERV1 1 572 -31 393 314 51 22 chr17 6180060 6180197 -83324356 + MIR SINE MIR 51 191 -71 236 291 0 78 chr17 6181531 6181672 -83322881 - LTR16C LTR ERVL -15 476 347 1957 207 27 56 chr17 6181889 6182407 -83322146 + MLT1D LTR MaLR 1 503 -2 387 283 123 65 chr17 6182759 6182880 -83321673 - L2 LINE L2 -15 3298 3186 2380 98 0 0 chr17 6182880 6183176 -83321377 + AluSx SINE Alu 1 296 -16 387 283 123 65 chr17 6183176 6183379 -83321174 - L2 LINE L2 -127 3186 2955 344 307 45 61 chr17 6183679 6183874 -83320679 + MIR SINE MIR 7 198 -61 429 20 0 0 chr17 6184043 6184093 -83320460 + (GA)n Simple_repeat Simple_repeat 1 50 0 602 168 2 6 chr17 6184394 6184506 -83320047 - L1MC3 LINE L1 -2 7783 6230 2436 80 0 3 chr17 6185116 6185417 -83319136 + AluY SINE Alu 1 300 -11 368 269 56 9 chr17 6186075 6186183 -83318370 - MIR SINE MIR -111 151 39 406 291 0 47 chr17 6186454 6186581 -83317972 + MIR3 SINE MIR 10 130 -78 298 248 8 66 chr17 6186591 6186712 -83317841 + MIR SINE MIR 92 205 -57 804 100 0 0 chr17 6187587 6187707 -83316846 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 2341 81 0 0 chr17 6187707 6187992 -83316561 - AluSq SINE Alu -28 285 1 514 231 84 30 chr17 6188219 6188374 -83316179 - MIR SINE MIR -63 145 7 761 178 7 22 chr17 6189016 6189151 -83315402 - FLAM_C SINE Alu 0 133 1 2129 134 0 3 chr17 6189157 6189455 -83315098 - AluSx SINE Alu -15 297 1 2180 113 23 3 chr17 6189460 6189762 -83314791 - AluSx SINE Alu -4 308 1 319 289 11 11 chr17 6189872 6189962 -83314591 - MIR3 SINE MIR -27 181 92 554 296 47 28 chr17 6190383 6190596 -83313957 - MIR SINE MIR -37 225 9 1295 172 97 0 chr17 6191768 6192036 -83312517 + MLT1D LTR MaLR 1 294 -211 1897 206 28 17 chr17 6192241 6192703 -83311850 + L1M4 LINE L1 4817 5283 -863 1989 112 25 4 chr17 6192706 6193004 -83311549 + AluSx SINE Alu 2 305 0 1202 179 0 0 chr17 6193004 6193200 -83311353 + AluJb SINE Alu 111 306 -6 600 160 40 8 chr17 6193200 6193325 -83311228 + L1MB8 LINE L1 6049 6177 -1 710 204 119 6 chr17 6193325 6193501 -83311052 + MIR SINE MIR 19 214 -48 258 283 33 0 chr17 6193533 6193593 -83310960 + L2 LINE L2 3157 3218 -54 2186 116 0 3 chr17 6193630 6193932 -83310621 + AluSx SINE Alu 1 301 -11 1852 150 56 3 chr17 6193946 6194232 -83310321 + AluSx SINE Alu 1 301 -11 37 81 0 0 chr17 6194244 6194330 -83310223 + AT_rich Low_complexity Low_complexity 1 86 0 279 237 26 13 chr17 6194672 6194748 -83309805 + HAL1 LINE L1 341 417 -2090 397 304 24 60 chr17 6194772 6194940 -83309613 + HAL1 LINE L1 1803 1964 -543 523 332 62 51 chr17 6195024 6195075 -83309478 + HAL1 LINE L1 2131 2180 -327 587 211 8 23 chr17 6195075 6195203 -83309350 + FLAM_A SINE Alu 1 126 -7 523 332 62 51 chr17 6195203 6195524 -83309029 + HAL1 LINE L1 2180 2507 0 1783 190 3 7 chr17 6195527 6195837 -83308716 + AluJo SINE Alu 1 309 -3 1862 152 24 7 chr17 6196050 6196340 -83308213 - AluJo SINE Alu -17 295 1 916 145 7 22 chr17 6196419 6196557 -83307996 - AluJo SINE Alu -176 136 1 229 219 67 92 chr17 6196559 6196626 -83307927 - MER112 DNA MER1_type -144 116 52 2424 80 0 3 chr17 6196626 6196925 -83307628 - AluY SINE Alu -13 298 1 229 219 67 92 chr17 6196925 6196976 -83307577 - MER112 DNA MER1_type -208 52 1 2440 92 0 0 chr17 6197112 6197418 -83307135 - AluSx SINE Alu -6 306 1 27 62 0 0 chr17 6199327 6199375 -83305178 + GC_rich Low_complexity Low_complexity 1 48 0 264 236 33 93 chr17 6200000 6200182 -83304371 - L1ME4a LINE L1 -16 6105 5935 290 143 32 0 chr17 6200796 6200859 -83303694 + L1M4 LINE L1 5498 5562 -612 2144 117 3 7 chr17 6200863 6201162 -83303391 - AluSx SINE Alu -14 298 1 262 233 11 79 chr17 6201524 6201713 -83302840 + (GAATG)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr17 6202709 6202730 -83301823 + (CAG)n Simple_repeat Simple_repeat 2 22 0 429 313 33 7 chr17 6202730 6202880 -83301673 - MIR SINE MIR -12 250 97 2313 104 0 0 chr17 6202909 6203198 -83301355 + AluSx SINE Alu 1 289 -23 294 29 0 0 chr17 6203199 6203234 -83301319 + (AATAG)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr17 6203494 6203515 -83301038 + (TGG)n Simple_repeat Simple_repeat 1 21 0 1959 254 94 34 chr17 6203606 6204245 -83300308 - MER45C DNA AcHobo -275 678 2 2217 117 3 0 chr17 6204574 6204873 -83299680 + AluSq SINE Alu 1 300 -13 2967 162 32 13 chr17 6204968 6205181 -83299372 + L1MB3 LINE L1 5618 5825 -358 2379 88 0 31 chr17 6205181 6205499 -83299054 + AluSq SINE Alu 1 308 -5 2967 162 32 13 chr17 6205499 6205840 -83298713 + L1MB3 LINE L1 5825 6183 0 257 0 30 0 chr17 6205882 6205915 -83298638 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 2014 140 0 40 chr17 6205984 6206119 -83298434 + AluSx SINE Alu 1 140 -172 2119 104 17 24 chr17 6206119 6206416 -83298137 + AluY SINE Alu 1 295 -16 2403 85 0 0 chr17 6206425 6206720 -83297833 + AluSg SINE Alu 1 295 -15 2014 140 0 40 chr17 6206720 6206895 -83297658 + AluSx SINE Alu 148 308 -4 761 192 8 0 chr17 6206895 6207020 -83297533 - FLAM_C SINE Alu -6 127 2 403 320 78 24 chr17 6207024 6207355 -83297198 + L1ME4a LINE L1 5567 5915 -206 500 143 0 0 chr17 6208149 6208219 -83296334 - AluSq SINE Alu -23 290 221 1054 136 0 19 chr17 6208222 6208376 -83296177 - AluSq SINE Alu -162 151 1 758 153 0 24 chr17 6208633 6208757 -83295796 - FLAM_C SINE Alu -1 142 22 1337 129 35 139 chr17 6208772 6208938 -83295615 - AluJo SINE Alu -17 295 174 2099 120 3 27 chr17 6208938 6209238 -83295315 - AluSx SINE Alu -19 293 1 1337 129 35 139 chr17 6209238 6209381 -83295172 - AluJo SINE Alu -138 174 18 233 310 110 20 chr17 6209387 6209487 -83295066 + L2 LINE L2 3173 3281 -32 * 250 288 158 56 chr17 6209485 6209700 -83294853 - MIR SINE MIR -6 256 20 2416 62 0 32 chr17 6209720 6210028 -83294525 + AluSx SINE Alu 1 298 -14 489 220 23 12 chr17 6210292 6210465 -83294088 + CT-rich Low_complexity Low_complexity 4 178 0 1029 188 6 0 chr17 6211184 6211360 -83293193 + MER45A DNA AcHobo 1 177 -1 767 159 40 0 chr17 6211373 6211499 -83293054 - MER41B LTR ERV1 -375 260 130 441 133 60 114 chr17 6211618 6211784 -83292769 + MER41B-int LTR ERV1 5923 6079 -252 749 195 31 0 chr17 6211834 6211962 -83292591 - FLAM_C SINE Alu 0 133 2 774 238 78 4 chr17 6212067 6212311 -83292242 + MER41B-int LTR ERV1 6412 6673 -3 2301 156 24 10 chr17 6212311 6212721 -83291832 + MER41B LTR ERV1 111 526 -109 26 74 0 0 chr17 6212721 6212775 -83291778 + AT_rich Low_complexity Low_complexity 1 54 0 428 115 16 0 chr17 6212780 6212841 -83291712 - U7 snRNA snRNA 0 63 2 310 220 8 41 chr17 6212841 6212963 -83291590 + MER41A LTR ERV1 404 474 -12 425 195 35 0 chr17 6214217 6214304 -83290249 - MIR3 SINE MIR -6 202 113 226 252 176 75 chr17 6214330 6214489 -83290064 - L3 LINE CR1 -60 1517 1343 644 332 135 42 chr17 6214540 6215131 -83289422 + L3 LINE CR1 733 1378 -199 558 232 73 40 chr17 6215171 6215322 -83289231 - MIR SINE MIR -60 202 47 188 256 78 116 chr17 6215776 6215905 -83288648 + MIR SINE MIR 20 143 -65 2070 126 7 0 chr17 6215962 6216255 -83288298 - AluY SINE Alu -15 296 2 1021 266 94 107 chr17 6216735 6217139 -83287414 + L2 LINE L2 2234 2642 -671 1195 195 172 19 chr17 6217139 6217400 -83287153 - AluJo SINE Alu -1 301 1 2012 128 0 39 chr17 6217409 6217576 -83286977 - AluSx SINE Alu -12 300 149 2466 78 0 0 chr17 6217576 6217872 -83286681 - AluY SINE Alu -15 296 1 2012 128 0 39 chr17 6217872 6218016 -83286537 - AluSx SINE Alu -163 149 1 2209 109 0 7 chr17 6218016 6218318 -83286235 - AluSq SINE Alu -13 300 1 1021 266 94 107 chr17 6218318 6218419 -83286134 + L2 LINE L2 2649 2750 -563 2489 91 3 0 chr17 6218419 6218726 -83285827 - AluSx SINE Alu -4 308 1 1021 266 94 107 chr17 6218726 6218975 -83285578 + L2 LINE L2 2750 2990 -323 969 210 23 14 chr17 6218975 6219194 -83285359 + MER90 LTR ERV1 392 612 -2 2527 84 0 0 chr17 6220387 6220695 -83283858 - AluSq SINE Alu -5 308 1 2232 146 16 14 chr17 6220791 6221155 -83283398 + MLT1A1 LTR MaLR 1 365 0 1090 198 0 0 chr17 6221709 6221886 -83282667 + FRAM SINE Alu 1 176 0 366 158 13 13 chr17 6222075 6222151 -83282402 + LTR67 LTR ERVL 460 535 -22 1779 117 44 0 chr17 6222496 6222744 -83281809 - AluSx SINE Alu -14 298 40 332 267 69 0 chr17 6223230 6223331 -83281222 - MIR SINE MIR -72 136 29 301 247 0 14 chr17 6223412 6223485 -83281068 + MER81 DNA DNA 1 72 -42 384 322 99 13 chr17 6223772 6223924 -83280629 - L2 LINE L2 -6 3266 3102 565 303 160 0 chr17 6224211 6224405 -83280148 + MIR SINE MIR 1 220 -42 2080 137 3 10 chr17 6224550 6224850 -83279703 - AluJb SINE Alu -14 298 1 844 221 35 0 chr17 6225217 6225389 -83279164 + MER45A DNA AcHobo 1 178 0 1627 98 31 9 chr17 6225721 6225946 -83278607 + MER30 DNA MER1_type 1 230 0 311 331 25 43 chr17 6226119 6226282 -83278271 + MIR SINE MIR 103 262 0 469 304 39 68 chr17 6227650 6227936 -83276617 - L1MEc LINE L1 -4923 1387 1109 2423 72 7 0 chr17 6227936 6228241 -83276312 - AluY SINE Alu -4 307 1 469 304 39 68 chr17 6228241 6228263 -83276290 - L1MEc LINE L1 -5201 1109 1088 383 295 65 11 chr17 6228266 6228527 -83276026 - L1MEc LINE L1 -5193 926 652 514 286 80 24 chr17 6228587 6228800 -83275753 + LTR33 LTR ERVL 297 521 0 215 261 43 14 chr17 6229304 6229373 -83275180 - L2 LINE L2 -3 3269 3199 * 667 310 47 5 chr17 6229367 6229580 -83274973 + MIR SINE MIR 5 226 -36 588 12 0 36 chr17 6229716 6229800 -83274753 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 1807 179 0 11 chr17 6229801 6230086 -83274467 - AluJb SINE Alu -30 282 1 286 263 92 0 chr17 6230332 6230408 -83274145 + L2 LINE L2 3153 3235 -37 861 221 55 89 chr17 6230420 6230528 -83274025 + L1MC5 LINE L1 7485 7595 -400 1949 136 0 14 chr17 6230528 6230815 -83273738 + AluSx SINE Alu 1 283 -29 225 65 0 0 chr17 6230815 6230846 -83273707 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 861 221 55 89 chr17 6230846 6231206 -83273347 + L1MC5 LINE L1 7593 7990 -5 1299 198 55 26 chr17 6231849 6232122 -83272431 + AluJb SINE Alu 1 281 -31 189 0 0 0 chr17 6232122 6232143 -83272410 + (T)n Simple_repeat Simple_repeat 1 21 0 2002 150 3 25 chr17 6232646 6232960 -83271593 + AluJo SINE Alu 1 307 -5 559 347 96 20 chr17 6232977 6233467 -83271086 + L2 LINE L2 2373 2899 -415 * 962 105 18 78 chr17 6233453 6233509 -83271044 - MER5A DNA MER1_type -4 185 127 2418 82 0 0 chr17 6233509 6233801 -83270752 + AluSg SINE Alu 1 292 -18 962 105 18 78 chr17 6233801 6233938 -83270615 - MER5A DNA MER1_type -62 127 5 792 248 174 20 chr17 6233937 6234288 -83270265 + L2 LINE L2 2868 3272 0 * 182 146 0 24 chr17 6234486 6234527 -83270026 + (ATGGTG)n Simple_repeat Simple_repeat 6 45 0 2344 117 0 0 chr17 6234708 6235016 -83269537 - AluSg SINE Alu -2 308 1 1288 124 0 0 chr17 6235016 6235193 -83269360 - AluY SINE Alu -8 303 127 982 236 99 16 chr17 6235613 6235935 -83268618 - LTR16A LTR ERVL -4 446 98 593 284 119 35 chr17 6236900 6237294 -83267259 + L2 LINE L2 2862 3288 -25 246 62 0 0 chr17 6237295 6237327 -83267226 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr17 6237431 6237463 -83267090 + AT_rich Low_complexity Low_complexity 1 32 0 2066 101 40 4 chr17 6237463 6237740 -83266813 - AluSx SINE Alu -25 287 1 528 200 83 0 chr17 6237758 6237878 -83266675 - MIR SINE MIR -72 190 61 233 167 0 0 chr17 6238475 6238523 -83266030 - Alu SINE Alu -1 165 118 * 352 62 0 0 chr17 6238520 6238568 -83265985 - Alu SINE Alu -255 48 1 676 284 80 12 chr17 6238588 6238912 -83265641 + L1MC4a LINE L1 5591 5936 -1872 395 301 52 39 chr17 6239096 6239249 -83265304 + MIR SINE MIR 6 160 -48 2040 146 0 3 chr17 6239610 6239911 -83264642 - AluSx SINE Alu -7 305 6 189 211 79 0 chr17 6240095 6240133 -83264420 - MIR SINE MIR -77 185 145 786 273 86 49 chr17 6240768 6241284 -83263269 + L2 LINE L2 2702 3231 -82 557 137 16 24 chr17 6241284 6241408 -83263145 + CT-rich Low_complexity Low_complexity 1 123 0 2332 92 0 0 chr17 6241408 6241700 -83262853 - AluSx SINE Alu -20 292 1 354 296 11 11 chr17 6241700 6241788 -83262765 + L2 LINE L2 3226 3313 0 202 291 52 92 chr17 6241904 6242155 -83262398 - L2 LINE L2 -384 2930 2690 652 105 0 0 chr17 6242158 6242244 -83262309 + AluSg/x SINE Alu 212 297 -12 3060 250 99 44 chr17 6242451 6243354 -83261199 + MER45C DNA AcHobo 2 953 0 760 226 0 0 chr17 6243737 6243874 -83260679 + FRAM SINE Alu 5 141 -35 914 111 0 16 chr17 6243893 6244136 -83260417 + (CA)n Simple_repeat Simple_repeat 1 239 0 409 337 50 42 chr17 6244639 6244889 -83259664 + MIR SINE MIR 3 253 -9 600 214 16 8 chr17 6245201 6245376 -83259177 + L1MA9 LINE L1 5874 6056 -244 265 203 72 0 chr17 6245590 6245659 -83258894 + MIR SINE MIR 49 122 -86 215 143 0 120 chr17 6245677 6245810 -83258743 + (CATA)n Simple_repeat Simple_repeat 3 119 0 319 393 62 5 chr17 6245822 6246033 -83258520 - MIR SINE MIR -9 253 31 1228 319 162 30 chr17 6246444 6247476 -83257077 + L2 LINE L2 959 2126 -1188 6146 212 44 66 chr17 6247518 6247848 -83256705 - L1M4 LINE L1 -1495 4651 4315 1916 155 3 7 chr17 6247848 6248151 -83256402 - AluJb SINE Alu -10 302 1 6146 212 44 66 chr17 6248151 6249424 -83255129 - L1M4 LINE L1 -1831 4315 3015 5176 138 26 20 chr17 6249424 6250328 -83254225 - L1MC1 LINE L1 0 6333 5424 6146 212 44 66 chr17 6250328 6250349 -83254204 - L1M4 LINE L1 -3131 3015 2995 1598 203 3 20 chr17 6250349 6250644 -83253909 - AluJo SINE Alu -22 290 1 6146 212 44 66 chr17 6250644 6250977 -83253576 - L1M4 LINE L1 -3151 2995 2736 1085 300 67 81 chr17 6251012 6251785 -83252768 + L2 LINE L2 2294 3051 -221 242 283 103 48 chr17 6252327 6252472 -83252081 + L2 LINE L2 3120 3272 -41 34 42 0 0 chr17 6252497 6252545 -83252008 + AT_rich Low_complexity Low_complexity 1 48 0 1625 178 7 4 chr17 6253309 6253584 -83250969 + AluJo SINE Alu 1 276 -36 351 0 0 0 chr17 6253587 6253626 -83250927 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 6253753 6253774 -83250779 + AT_rich Low_complexity Low_complexity 1 21 0 349 316 15 7 chr17 6254239 6254375 -83250178 + L1ME4a LINE L1 5712 5848 -273 1982 121 4 4 chr17 6254385 6254658 -83249895 + AluSx SINE Alu 6 278 -34 192 40 0 0 chr17 6254658 6254683 -83249870 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 423 0 0 0 chr17 6254685 6254732 -83249821 + (CA)n Simple_repeat Simple_repeat 2 48 0 1819 184 0 13 chr17 6254737 6255053 -83249500 + AluJb SINE Alu 1 312 0 1929 98 11 11 chr17 6255196 6255462 -83249091 - AluSq SINE Alu -15 298 33 314 115 0 0 chr17 6255913 6255974 -83248579 - AluJo SINE Alu -1 301 241 966 194 0 22 chr17 6255974 6256154 -83248399 - AluJo SINE Alu -136 176 1 445 276 104 27 chr17 6256810 6257031 -83247522 - MIR SINE MIR -12 250 13 462 231 56 0 chr17 6258146 6258254 -83246299 - MER81 DNA DNA 0 114 1 2093 95 14 11 chr17 6258998 6259282 -83245271 - AluSq SINE Alu -28 285 1 1989 156 0 7 chr17 6259356 6259664 -83244889 - AluSx SINE Alu -6 306 1 242 259 179 9 chr17 6259877 6259989 -83244564 + L2 LINE L2 3179 3309 -4 533 218 9 9 chr17 6262617 6262727 -83241826 - L2 LINE L2 -5 3308 3199 264 203 177 0 chr17 6262706 6262785 -83241768 + MIR SINE MIR 60 152 -56 * 503 277 100 4 chr17 6263001 6263232 -83241321 + LTR16C LTR ERVL 238 490 -1 2283 108 7 0 chr17 6263407 6263714 -83240839 - AluSq SINE Alu -4 309 1 2739 14 0 0 chr17 6263806 6264101 -83240452 - AluYb8 SINE Alu -23 295 1 312 281 16 16 chr17 6264931 6265052 -83239501 + L1PA12 LINE L1 2182 2302 -5279 5320 200 15 17 chr17 6265090 6266386 -83238167 + L1PA15 LINE L1 1231 2522 -4275 29 0 0 0 chr17 6266391 6266420 -83238133 + AT_rich Low_complexity Low_complexity 1 29 0 6456 124 30 2 chr17 6266420 6267084 -83237469 - L1MA1 LINE L1 -4 7717 7073 2515 90 0 0 chr17 6267084 6267395 -83237158 - AluY SINE Alu 0 311 1 6456 124 30 2 chr17 6267395 6268008 -83236545 - L1MA1 LINE L1 -648 7073 6403 * 11452 139 34 13 chr17 6267999 6271353 -83233200 - L1MA1 LINE L1 -2457 5108 1684 * 12471 220 84 12 chr17 6271352 6274567 -83229986 + L1PA15 LINE L1 2507 5984 -832 1975 136 31 3 chr17 6274567 6274861 -83229692 + AluSx SINE Alu 1 302 -10 12471 220 84 12 chr17 6274861 6274963 -83229590 + L1PA15 LINE L1 5984 6077 -739 40822 55 6 3 chr17 6274964 6276789 -83227764 + L1PA5 LINE L1 2 1820 -4334 2416 88 0 10 chr17 6276789 6277094 -83227459 - AluY SINE Alu -8 303 2 40822 55 6 3 chr17 6277094 6281401 -83223152 + L1PA5 LINE L1 1820 6152 -2 336 223 0 8 chr17 6281401 6281492 -83223061 + MLT2B1 LTR ERVL 132 220 -177 4039 134 41 61 chr17 6281492 6282083 -83222470 + L1PA15 LINE L1 6064 6638 -178 2282 103 0 6 chr17 6282083 6282394 -83222159 + AluY SINE Alu 1 309 -2 4039 134 41 61 chr17 6282394 6282557 -83221996 + L1PA15 LINE L1 6638 6803 -13 287 146 0 0 chr17 6283066 6283121 -83221432 - L1PA16 LINE L1 -6 6160 6106 371 333 133 36 chr17 6283392 6283617 -83220936 + MIR SINE MIR 9 255 -7 193 218 18 18 chr17 6283662 6283717 -83220836 - MIR3 SINE MIR -144 64 10 183 238 200 25 chr17 6285176 6285256 -83219297 + MIR SINE MIR 33 126 -82 219 69 0 0 chr17 6285311 6285340 -83219213 + (CAG)n Simple_repeat Simple_repeat 1 29 0 713 266 119 5 chr17 6285352 6285570 -83218983 - MIR SINE MIR -13 249 7 204 224 0 20 chr17 6287409 6287458 -83217095 + MIR SINE MIR 104 145 -63 1633 117 51 40 chr17 6287495 6287768 -83216785 - AluSx SINE Alu -36 276 1 1422 249 56 56 chr17 6287952 6288502 -83216051 - MER21B LTR ERV1 -75 788 239 856 261 32 12 chr17 6288505 6288754 -83215799 + L2 LINE L2 2531 2784 -530 859 155 0 8 chr17 6288761 6288890 -83215663 + FLAM_C SINE Alu 6 133 -10 1920 119 25 21 chr17 6288904 6289189 -83215364 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr17 6289202 6289226 -83215327 + (CAA)n Simple_repeat Simple_repeat 2 25 0 841 280 217 18 chr17 6289238 6289673 -83214880 + L2 LINE L2 2776 3295 -18 1915 203 48 42 chr17 6290727 6291229 -83213324 - LTR10B LTR ERV1 0 505 1 202 194 0 0 chr17 6291372 6291408 -83213145 + CT-rich Low_complexity Low_complexity 3 38 0 811 218 82 33 chr17 6291753 6291930 -83212623 - L1MD3 LINE L1 0 8042 7855 2055 129 3 28 chr17 6291930 6292247 -83212306 - AluSx SINE Alu -3 309 1 811 218 82 33 chr17 6292247 6292374 -83212179 - L1MD3 LINE L1 -187 7855 7736 453 316 16 61 chr17 6292597 6292930 -83211623 - L1MC4a LINE L1 -330 5912 5591 204 40 0 0 chr17 6293262 6293287 -83211266 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 2129 113 29 26 chr17 6293287 6293597 -83210956 - AluSx SINE Alu -1 311 1 250 291 47 12 chr17 6293678 6293764 -83210789 - MIR SINE MIR -48 214 126 490 284 41 50 chr17 6294024 6294242 -83210311 + L3b LINE CR1 1273 1488 -95 1706 169 7 36 chr17 6294589 6294890 -83209663 - AluJb SINE Alu -20 292 1 2389 82 0 0 chr17 6294951 6295245 -83209308 - AluSc SINE Alu -15 294 1 324 347 0 40 chr17 6295382 6295506 -83209047 + L2 LINE L2 3154 3272 0 286 282 59 0 chr17 6295920 6296005 -83208548 + L2 LINE L2 3204 3293 -20 223 335 52 31 chr17 6296754 6296945 -83207608 + L2 LINE L2 2563 2757 -557 563 341 90 34 chr17 6296987 6297398 -83207155 + L2 LINE L2 2831 3264 -8 814 252 113 76 chr17 6297588 6298076 -83206477 + LTR33A LTR ERVL 10 515 -8 2513 91 0 0 chr17 6298962 6299270 -83205283 - AluSg SINE Alu -2 308 1 382 273 89 99 chr17 6299378 6299792 -83204761 - L2 LINE L2 -18 3254 2845 420 266 75 44 chr17 6301260 6301451 -83203102 - MIR SINE MIR -67 141 3 21 0 0 0 chr17 6301581 6301602 -83202951 + AT_rich Low_complexity Low_complexity 1 21 0 803 245 135 5 chr17 6301729 6301937 -83202616 + MIR SINE MIR 28 262 0 365 296 106 30 chr17 6301949 6302148 -83202405 - L1ME1 LINE L1 -231 5935 5722 2405 87 3 7 chr17 6302472 6302781 -83201772 + AluSg SINE Alu 1 308 -2 588 205 111 8 chr17 6302877 6302994 -83201559 - MIR SINE MIR -71 191 63 228 35 0 0 chr17 6303403 6303432 -83201121 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 254 239 43 123 chr17 6303765 6303928 -83200625 + L2 LINE L2 2935 3084 -188 335 355 8 0 chr17 6304209 6304330 -83200223 + L3 LINE CR1 695 816 -761 314 233 35 35 chr17 6304510 6304596 -83199957 + L2 LINE L2 3228 3313 0 2050 96 46 7 chr17 6304648 6304930 -83199623 - AluSq SINE Alu -20 293 1 266 324 185 0 chr17 6305117 6305225 -83199328 + L2 LINE L2 3143 3270 -2 2184 105 0 0 chr17 6305393 6305669 -83198884 - AluSx SINE Alu -36 276 1 188 316 161 19 chr17 6305785 6305940 -83198613 - L2 LINE L2 -2474 840 664 455 291 8 0 chr17 6306498 6306632 -83197921 - MLT1L LTR MaLR -5 610 476 311 279 36 18 chr17 6306782 6306893 -83197660 - MLT1L LTR MaLR -322 293 181 225 186 0 0 chr17 6306943 6306986 -83197567 - MLT1L LTR MaLR -431 184 142 2258 124 3 0 chr17 6307041 6307347 -83197206 - AluSx SINE Alu -5 307 1 549 209 51 19 chr17 6307347 6307505 -83197048 - MLT1H LTR MaLR -4 545 383 1936 160 3 22 chr17 6307742 6308055 -83196498 + AluJb SINE Alu 1 307 -5 306 252 66 18 chr17 6308374 6308499 -83196054 - MIR SINE MIR -47 161 33 195 250 75 25 chr17 6308656 6308736 -83195817 + L2 LINE L2 3191 3274 -39 416 368 16 11 chr17 6308785 6308975 -83195578 - MIR SINE MIR -70 192 2 2427 90 3 0 chr17 6309120 6309421 -83195132 - AluSp SINE Alu -11 302 1 477 248 58 82 chr17 6309426 6309470 -83195083 - MIR SINE MIR -49 213 169 1774 181 0 10 chr17 6309470 6309769 -83194784 + AluJo SINE Alu 1 296 -16 477 248 58 82 chr17 6309769 6309930 -83194623 - MIR SINE MIR -93 169 13 792 240 18 98 chr17 6311118 6311393 -83193160 - MIR SINE MIR -2 260 8 357 343 45 0 chr17 6311725 6311859 -83192694 + MIR3 SINE MIR 48 187 -21 390 292 171 31 chr17 6362087 6362443 -83142110 - L2 LINE L2 -6 3266 2861 339 283 297 0 chr17 6362452 6362590 -83141963 + MIR SINE MIR 48 226 -36 425 298 54 54 chr17 6363215 6363564 -83140989 - L2 LINE L2 -94 3178 2830 313 314 29 0 chr17 6363632 6363734 -83140819 + MIR SINE MIR 36 140 -68 760 285 170 16 chr17 6363766 6364078 -83140475 - L2 LINE L2 0 3313 2954 411 259 61 27 chr17 6364092 6364239 -83140314 - MIR SINE MIR -27 235 84 258 105 0 0 chr17 6364470 6364508 -83140045 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 1968 134 25 0 chr17 6364508 6364792 -83139761 - AluJo SINE Alu -21 291 1 351 288 34 68 chr17 6364904 6365050 -83139503 - L1ME4a LINE L1 -14 6107 5967 329 131 321 36 chr17 6365160 6365244 -83139309 + AluJb SINE Alu 1 108 -194 198 264 94 0 chr17 6365653 6365706 -83138847 - MIR SINE MIR -99 163 106 775 261 61 8 chr17 6366798 6367043 -83137510 - MIR SINE MIR 0 262 5 1919 127 22 120 chr17 6367081 6367497 -83137056 + THE1C LTR MaLR 1 375 0 218 281 101 96 chr17 6368556 6368734 -83135819 + L3 LINE CR1 274 452 -1125 232 283 81 40 chr17 6368761 6368860 -83135693 - MIR SINE MIR -82 180 78 418 319 161 14 chr17 6368931 6369223 -83135330 + L3 LINE CR1 427 761 -816 199 188 0 0 chr17 6369268 6369300 -83135253 + MIR SINE MIR 76 107 -155 571 290 53 0 chr17 6369424 6369593 -83134960 + MIR SINE MIR 6 183 -79 696 306 107 31 chr17 6369746 6369858 -83134695 + L2 LINE L2 2722 2824 -489 5158 74 8 46 chr17 6369858 6370576 -83133977 + LTR8 LTR ERV1 1 691 0 696 306 107 31 chr17 6370576 6371015 -83133538 + L2 LINE L2 2824 3313 0 302 243 36 45 chr17 6372833 6372944 -83131609 - MIR SINE MIR -127 135 26 479 258 61 32 chr17 6373450 6373888 -83130665 + L1ME4a LINE L1 5562 6041 -80 1119 216 98 53 chr17 6374072 6374451 -83130102 + MSTD LTR MaLR 1 396 0 301 253 0 13 chr17 6375251 6375330 -83129223 + MER102a DNA MER1_type 249 326 -4 367 261 0 63 chr17 6375804 6375915 -83128638 - MIR SINE MIR -88 120 17 584 237 72 20 chr17 6376267 6376419 -83128134 + MIR SINE MIR 28 187 -75 202 122 122 0 chr17 6376547 6376588 -83127965 + MIR SINE MIR 176 221 -41 2189 105 0 3 chr17 6378738 6379024 -83125529 + AluSx SINE Alu 21 305 -7 328 277 109 25 chr17 6379665 6379784 -83124769 + MLT1I LTR MaLR 18 146 -263 369 211 58 19 chr17 6379943 6380047 -83124506 + MLT1G LTR MaLR 483 590 0 528 254 187 13 chr17 6380086 6380252 -83124301 - L1MC4a LINE L1 -552 5569 5622 1382 129 35 22 chr17 6380252 6380484 -83124069 - MER46A DNA MER2_type -1 235 1 528 254 187 13 chr17 6380484 6380627 -83123926 - L1MC4a LINE L1 -498 5623 5506 1016 238 75 42 chr17 6380729 6381005 -83123548 - MER113 DNA MER1_type? 0 521 227 1531 142 32 21 chr17 6381005 6381287 -83123266 - L1MA8 LINE L1 -1 6290 6006 1016 238 75 42 chr17 6381287 6381410 -83123143 - MER113 DNA MER1_type? -294 227 109 1944 210 83 19 chr17 6381431 6381685 -83122868 - L1MC4a LINE L1 0 7808 7572 2188 106 143 13 chr17 6381685 6382064 -83122489 + MSTA LTR MaLR 1 428 0 1944 210 83 19 chr17 6382064 6382276 -83122277 - L1MC4a LINE L1 -236 7572 7312 323 266 0 21 chr17 6383340 6383434 -83121119 - L2 LINE L2 -34 3279 3188 386 117 17 0 chr17 6383853 6383913 -83120640 - MSTB LTR MaLR 0 432 372 1339 112 32 5 chr17 6383913 6384101 -83120452 + AluSq SINE Alu 99 291 -22 1869 188 42 6 chr17 6384101 6384462 -83120091 - MSTB LTR MaLR -52 374 1 382 312 30 21 chr17 6384731 6384994 -83119559 + MLT1J2 LTR MaLR 109 435 -15 241 196 18 0 chr17 6385263 6385319 -83119234 - MIR SINE MIR -64 198 142 1151 179 0 28 chr17 6385327 6385539 -83119014 - AluJo SINE Alu -20 292 87 297 0 0 0 chr17 6385543 6385576 -83118977 + (TC)n Simple_repeat Simple_repeat 2 34 0 360 245 189 0 chr17 6385576 6385682 -83118871 - MIR SINE MIR -123 139 14 1027 268 97 76 chr17 6386407 6386771 -83117782 - MLT1G3 LTR MaLR -17 513 177 2261 110 0 0 chr17 6386771 6387079 -83117474 + AluSq SINE Alu 1 308 -5 1027 268 97 76 chr17 6387079 6387260 -83117293 - MLT1G3 LTR MaLR -353 177 1 288 261 31 39 chr17 6387359 6387489 -83117064 - LTR67 LTR ERVL 0 557 429 703 283 11 0 chr17 6387636 6387827 -83116726 + MIR SINE MIR 65 257 -5 2139 117 3 0 chr17 6387888 6388170 -83116383 - AluSx SINE Alu -25 287 5 196 203 85 51 chr17 6388206 6388265 -83116288 + L2 LINE L2 3211 3271 -1 2231 100 37 7 chr17 6388330 6388630 -83115923 - AluSp SINE Alu -4 309 1 1959 120 33 10 chr17 6388723 6388744 -83115809 - AluSq SINE Alu -6 307 288 1007 111 11 17 chr17 6388744 6388925 -83115628 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1959 120 33 10 chr17 6388925 6389203 -83115350 - AluSq SINE Alu -25 288 1 2221 96 28 0 chr17 6391010 6391301 -83113252 + AluSc SINE Alu 1 299 -10 714 289 25 0 chr17 6391312 6391516 -83113037 - MIR SINE MIR -2 260 52 565 317 41 27 chr17 6391730 6391951 -83112602 - MIR SINE MIR -12 250 27 213 43 0 65 chr17 6391955 6392001 -83112552 + (TTTTC)n Simple_repeat Simple_repeat 4 46 0 2389 99 0 6 chr17 6392003 6392316 -83112237 - AluSq SINE Alu 0 313 3 5561 42 12 9 chr17 6392340 6393442 -83111111 - SVA Other Other -954 1386 5 224 0 0 111 chr17 6393446 6393509 -83111044 + (GGGAGA)n Simple_repeat Simple_repeat 6 61 0 235 326 117 13 chr17 6393720 6393959 -83110594 + L2 LINE L2 2155 2418 -896 420 289 29 40 chr17 6394199 6394372 -83110181 + MIR SINE MIR 84 254 -8 225 328 134 0 chr17 6394392 6394511 -83110042 + L2 LINE L2 2713 2847 -467 311 158 0 0 chr17 6394582 6394639 -83109914 - L1MA8 LINE L1 -26 6265 6209 6412 233 82 30 chr17 6394679 6394714 -83109839 + L1MEc LINE L1 234 266 -5949 1512 186 53 42 chr17 6394714 6395075 -83109478 - MLT1A1 LTR MaLR 0 365 1 6412 233 82 30 chr17 6395075 6397447 -83107106 + L1MEc LINE L1 266 2720 -3495 9041 92 14 9 chr17 6397464 6398673 -83105880 + HSMAR1 DNA Mariner 9 1223 -64 7332 155 9 13 chr17 6398673 6398715 -83105838 + L1PB1 LINE L1 3796 3837 -2314 2904 88 6 135 chr17 6398715 6399235 -83105318 + MLT2A2 LTR ERVL 1 453 0 7332 155 9 13 chr17 6399235 6401553 -83103000 + L1PB1 LINE L1 3837 6150 -1 586 89 0 0 chr17 6401560 6401639 -83102914 + HSMAR1 DNA Mariner 1208 1286 -1 2250 98 0 55 chr17 6403306 6403633 -83100920 + AluSg SINE Alu 1 309 -1 219 280 0 0 chr17 6404154 6404204 -83100349 + CT-rich Low_complexity Low_complexity 3 52 0 2366 95 0 3 chr17 6405571 6405877 -83098676 + AluY SINE Alu 4 308 -3 2825 75 5 3 chr17 6406322 6406698 -83097855 + L1PA8 LINE L1 5796 6172 0 2396 167 50 27 chr17 6406739 6407224 -83097329 + L1MB3 LINE L1 5688 6183 0 612 251 167 35 chr17 6407487 6407798 -83096755 - MLT1J LTR MaLR -43 468 117 234 208 0 19 chr17 6407823 6407876 -83096677 - MLT1L LTR MaLR -543 72 21 414 256 55 97 chr17 6407912 6408149 -83096404 + HAL1 LINE L1 1254 1466 -1041 2581 84 0 0 chr17 6408149 6408459 -83096094 + AluSx SINE Alu 1 310 -2 414 256 55 97 chr17 6408459 6408655 -83095898 + HAL1 LINE L1 1466 1669 -838 1579 221 42 32 chr17 6408830 6409008 -83095545 - L1M4 LINE L1 -824 5322 5147 2466 56 0 37 chr17 6409008 6409329 -83095224 - AluY SINE Alu -2 309 1 1579 221 42 32 chr17 6409329 6409584 -83094969 - L1M4 LINE L1 -999 5147 4885 213 313 0 0 chr17 6409933 6410000 -83094553 + T-rich Low_complexity Low_complexity 1 67 0 2359 101 0 0 chr17 6410241 6410539 -83094014 + AluSx SINE Alu 1 298 -14 893 145 7 14 chr17 6410674 6410819 -83093734 + AluJo SINE Alu 88 231 -81 186 143 0 0 chr17 6410821 6410856 -83093697 + (A)n Simple_repeat Simple_repeat 1 35 0 578 321 86 45 chr17 6410962 6411187 -83093366 + L1MEc LINE L1 2152 2366 -3849 2027 131 0 39 chr17 6411187 6411499 -83093054 + AluSg SINE Alu 3 302 -8 578 321 86 45 chr17 6411499 6411742 -83092811 + L1MEc LINE L1 2366 2599 -3616 246 270 63 46 chr17 6412122 6412296 -83092257 + L1MEc LINE L1 2942 3118 -3097 396 322 7 20 chr17 6412534 6412683 -83091870 + MER5B DNA MER1_type 1 147 -31 524 293 104 30 chr17 6412700 6413257 -83091296 + L1M4 LINE L1 4131 4752 -1394 2084 150 3 15 chr17 6413257 6413598 -83090955 - MER1B DNA MER1_type 0 337 1 524 293 104 30 chr17 6413598 6413742 -83090811 + L1M4 LINE L1 4752 4884 -1262 780 268 91 78 chr17 6413762 6414259 -83090294 - MLT1J LTR MaLR 0 511 9 604 126 84 8 chr17 6414570 6414689 -83089864 + MER53 DNA DNA 1 128 -61 447 19 0 0 chr17 6414692 6414744 -83089809 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6255 56 13 0 chr17 6415468 6416238 -83088315 - L1PA8A LINE L1 -28 6103 5324 2028 134 16 7 chr17 6417492 6417799 -83086754 - AluSg SINE Alu 0 310 1 312 244 81 81 chr17 6418184 6418231 -83086322 + L2 LINE L2 3117 3163 -150 2118 112 3 7 chr17 6418231 6418541 -83086012 - AluSx SINE Alu 0 309 1 312 244 81 81 chr17 6418541 6418689 -83085864 + L2 LINE L2 3162 3313 0 730 318 39 33 chr17 6418755 6419092 -83085461 - MLT1I LTR MaLR 0 409 71 658 147 104 61 chr17 6419354 6419373 -83085180 + MER21A LTR ERV1 6 23 -908 365 0 22 0 chr17 6419373 6419418 -83085135 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 658 147 104 61 chr17 6419418 6419561 -83084992 + MER21A LTR ERV1 23 175 -756 * 2200 161 116 9 chr17 6419550 6419990 -83084563 + MER21B LTR ERV1 377 863 0 1995 106 0 15 chr17 6420251 6420524 -83084029 - AluSx SINE Alu -43 269 1 2215 110 3 49 chr17 6420861 6421188 -83083365 + AluSx SINE Alu 1 312 0 1293 171 38 46 chr17 6421581 6421844 -83082709 - AluJo SINE Alu -10 302 42 330 338 30 0 chr17 6422410 6422543 -83082010 - L3 LINE CR1 -1 1576 1440 450 301 12 18 chr17 6422566 6422729 -83081824 + MIR SINE MIR 90 251 -11 1311 105 6 0 chr17 6422856 6423027 -83081526 - AluSp SINE Alu -8 305 134 2449 89 0 10 chr17 6423027 6423341 -83081212 - AluSx SINE Alu -1 311 1 22 70 0 0 chr17 6423957 6424000 -83080553 + AT_rich Low_complexity Low_complexity 1 43 0 2314 80 0 48 chr17 6424337 6424651 -83079902 - AluSx SINE Alu -13 299 1 337 284 7 47 chr17 6424651 6424788 -83079765 + CT-rich Low_complexity Low_complexity 13 145 0 185 260 13 0 chr17 6424958 6425035 -83079518 + C-rich Low_complexity Low_complexity 4 81 0 290 274 32 19 chr17 6425045 6425202 -83079351 + (TCTCTG)n Simple_repeat Simple_repeat 3 161 0 180 111 0 0 chr17 6425213 6425240 -83079313 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 1344 219 61 32 chr17 6426535 6427192 -83077361 - L1MD1 LINE L1 0 7995 7358 2182 114 3 0 chr17 6427192 6427490 -83077063 - AluSx SINE Alu -13 299 1 1344 219 61 32 chr17 6427490 6427706 -83076847 - L1MD1 LINE L1 -637 7358 6079 318 50 0 0 chr17 6427732 6427772 -83076781 + (TA)n Simple_repeat Simple_repeat 1 40 0 467 259 121 30 chr17 6428223 6428455 -83076098 + MLT1K LTR MaLR 329 581 -7 400 250 125 60 chr17 6428607 6428775 -83075778 + MIR SINE MIR 28 206 -56 1069 210 0 14 chr17 6429399 6429618 -83074935 - MER20 DNA MER1_type 0 219 4 609 266 27 23 chr17 6429623 6429812 -83074741 + MIR SINE MIR 1 197 -63 476 186 29 10 chr17 6429866 6429968 -83074585 + L2 LINE L2 3151 3254 -18 2545 77 3 0 chr17 6430578 6430889 -83073664 + AluSx SINE Alu 1 312 0 710 174 45 50 chr17 6431447 6431648 -83072905 + LTR45 LTR ERV1 326 525 0 331 346 78 7 chr17 6431798 6431951 -83072602 + L2 LINE L2 2562 2725 -589 365 314 129 16 chr17 6431974 6432292 -83072261 + L1ME4a LINE L1 5697 6050 -71 2287 95 7 3 chr17 6432443 6432737 -83071816 - AluSg SINE Alu -15 295 1 970 221 101 4 chr17 6432779 6433055 -83071498 - LTR16C LTR ERVL 0 491 189 2173 96 34 10 chr17 6433190 6433483 -83071070 + AluSx SINE Alu 1 300 -12 213 303 81 0 chr17 6433503 6433602 -83070951 + MIR SINE MIR 86 192 -70 324 0 0 0 chr17 6433606 6433642 -83070911 + (TG)n Simple_repeat Simple_repeat 2 37 0 379 141 13 51 chr17 6433644 6433722 -83070831 + MLT1A2 LTR MaLR 4 78 -296 1064 170 5 25 chr17 6433739 6433939 -83070614 + MLT1A2 LTR MaLR 179 374 0 699 186 9 0 chr17 6434385 6434498 -83070055 - MER81 DNA DNA 0 114 1 546 273 142 24 chr17 6436201 6436490 -83068063 + MLT1K LTR MaLR 17 339 -249 2067 127 0 3 chr17 6436949 6437264 -83067289 - AluSg SINE Alu 0 314 1 264 291 22 15 chr17 6438182 6438316 -83066237 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 2323 96 3 0 chr17 6439487 6439779 -83064774 - AluSc SINE Alu -16 293 1 901 219 29 15 chr17 6439794 6439825 -83064728 - L1MA1 LINE L1 -380 5800 5771 1774 202 16 26 chr17 6439825 6440202 -83064351 - L1MB5 LINE L1 -8 6166 5794 4883 33 0 3 chr17 6440203 6440779 -83063774 + L1PA8 LINE L1 5594 6167 -5 901 219 29 15 chr17 6440779 6440995 -83063558 - L1MA1 LINE L1 -408 5772 5582 401 342 58 52 chr17 6440998 6441346 -83063207 + L2 LINE L2 2879 3228 -44 220 218 23 0 chr17 6441854 6441941 -83062612 + GA-rich Low_complexity Low_complexity 1 89 0 261 277 26 26 chr17 6442047 6442202 -83062351 + (CAGAGA)n Simple_repeat Simple_repeat 6 160 0 466 283 50 13 chr17 6442326 6442485 -83062068 - MIR SINE MIR -81 181 17 5996 146 105 89 chr17 6442559 6444228 -83060325 + pTR5 LTR ERV1 743 2438 0 2163 99 0 55 chr17 6444700 6445012 -83059541 + AluSc SINE Alu 6 300 -9 419 185 260 27 chr17 6445098 6445244 -83059309 + L2 LINE L2 3134 3313 0 205 319 104 0 chr17 6445375 6445510 -83059043 - L2 LINE L2 -560 2754 2606 361 133 0 80 chr17 6446067 6446180 -83058373 + (CCCCCA)n Simple_repeat Simple_repeat 2 105 0 347 310 161 35 chr17 6446609 6446957 -83057596 + L2 LINE L2 2873 3264 -8 252 246 35 70 chr17 6446971 6447085 -83057468 + MIR SINE MIR 29 138 -70 1017 259 17 4 chr17 6447160 6447399 -83057154 - MIR SINE MIR -10 252 11 626 246 191 5 chr17 6447422 6447621 -83056932 - MIR SINE MIR -7 255 20 252 402 0 9 chr17 6447639 6447746 -83056807 - MIR3 SINE MIR -54 154 49 629 253 69 35 chr17 6447885 6448207 -83056346 - MLT1H LTR MaLR -235 336 14 2371 94 7 0 chr17 6448217 6448516 -83056037 + AluSx SINE Alu 1 301 -11 2137 150 36 85 chr17 6449334 6449922 -83054631 + L1MB3 LINE L1 5625 6183 0 2402 98 0 3 chr17 6450619 6450924 -83053629 + AluSq SINE Alu 2 305 -8 182 333 65 36 chr17 6451251 6451352 -83053201 - MIR SINE MIR -23 239 131 2130 119 0 13 chr17 6451352 6451655 -83052898 + AluSx SINE Alu 1 299 -13 182 333 65 36 chr17 6451655 6451691 -83052862 - MIR SINE MIR -131 131 98 264 323 58 35 chr17 6451776 6452002 -83052551 - L2 LINE L2 -533 2781 2551 260 213 38 12 chr17 6452447 6452527 -83052026 + GA-rich Low_complexity Low_complexity 3 84 0 204 294 0 74 chr17 6453187 6453350 -83051203 + G-rich Low_complexity Low_complexity 12 162 0 344 333 108 5 chr17 6453554 6453740 -83050813 - MIR SINE MIR 0 262 58 2223 95 4 0 chr17 6453970 6454243 -83050310 - AluSx SINE Alu -38 274 1 796 191 114 64 chr17 6454516 6454736 -83049817 - MLT1D LTR MaLR 0 505 275 2556 206 36 10 chr17 6454819 6455405 -83049148 - MLT1H-int LTR MaLR -770 601 1 1736 217 2 42 chr17 6455407 6455817 -83048736 - MLT2C1 LTR ERVL -2 395 2 293 194 108 21 chr17 6456057 6456150 -83048403 - MLT1H LTR MaLR -13 536 436 439 282 161 10 chr17 6458525 6458802 -83045751 + MIR SINE MIR 4 252 -10 198 103 0 0 chr17 6458812 6458841 -83045712 + (CAT)n Simple_repeat Simple_repeat 2 30 0 31 44 0 0 chr17 6459032 6459077 -83045476 + AT_rich Low_complexity Low_complexity 1 45 0 185 284 123 25 chr17 6459118 6459199 -83045354 - MIR3 SINE MIR -33 175 87 1683 162 65 0 chr17 6459254 6459413 -83045140 - AluJo SINE Alu -11 301 154 194 88 0 29 chr17 6459413 6459447 -83045106 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1683 162 65 0 chr17 6459447 6459565 -83044988 - AluJo SINE Alu -158 154 6 551 318 90 0 chr17 6459834 6460067 -83044486 - MIR SINE MIR -8 254 1 243 218 35 103 chr17 6460195 6460270 -83044283 + L2 LINE L2 3229 3299 -14 186 103 0 0 chr17 6460270 6460299 -83044254 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 243 218 35 103 chr17 6460299 6460310 -83044243 + L2 LINE L2 3299 3309 -4 2356 92 0 13 chr17 6460394 6460700 -83043853 + AluSx SINE Alu 1 302 -10 182 262 0 49 chr17 6460797 6460858 -83043695 - L2 LINE L2 -531 2783 2726 447 220 148 99 chr17 6462071 6462416 -83042137 + LTR33 LTR ERVL 2 363 -158 1102 285 103 14 chr17 6464226 6464664 -83039889 - L2 LINE L2 -8 3305 2829 219 250 88 15 chr17 6464897 6464965 -83039588 - L2 LINE L2 -23 3249 3177 291 315 33 0 chr17 6465329 6465421 -83039132 - MIR SINE MIR -78 184 90 546 279 85 5 chr17 6465425 6465626 -83038927 + LTR50 LTR ERVL 3 219 -576 406 295 179 0 chr17 6466674 6466847 -83037706 + MIR SINE MIR 58 261 -1 294 296 208 0 chr17 6466972 6467097 -83037456 + MIR SINE MIR 110 260 -2 934 356 59 41 chr17 6467161 6467741 -83036812 - L3 LINE CR1 -194 1383 788 2184 120 30 0 chr17 6467741 6468041 -83036512 - AluSx SINE Alu -3 309 1 934 356 59 41 chr17 6468041 6468125 -83036428 - L3 LINE CR1 -789 788 707 267 280 40 64 chr17 6468142 6468267 -83036286 - MIR SINE MIR -57 151 30 306 281 0 158 chr17 6468269 6468370 -83036183 - L3 LINE CR1 -4 1573 1536 1882 172 33 0 chr17 6468370 6468672 -83035881 - AluJo SINE Alu 0 312 1 306 281 0 158 chr17 6468672 6468830 -83035723 - L3 LINE CR1 -41 1536 1355 856 233 31 54 chr17 6469429 6469652 -83034901 + MER20 DNA MER1_type 2 219 0 573 222 50 61 chr17 6470337 6470535 -83034018 + MER63A DNA MER1_type 1 196 -14 520 190 12 104 chr17 6471467 6471630 -83032923 - MER58C DNA MER1_type -1 214 67 24 0 0 0 chr17 6472602 6472626 -83031927 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr17 6472626 6472659 -83031894 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2114 99 7 7 chr17 6472662 6472944 -83031609 - AluSx SINE Alu -30 282 1 263 349 23 0 chr17 6473876 6473962 -83030591 + L2 LINE L2 2686 2773 -541 479 167 9 0 chr17 6474021 6474135 -83030418 + (CA)n Simple_repeat Simple_repeat 1 115 0 374 225 101 76 chr17 6474483 6474825 -83029728 + L1MC4a LINE L1 5601 5824 -297 1721 179 32 32 chr17 6474972 6475414 -83029139 - L1MDa LINE L1 -4870 1670 1229 1018 164 11 91 chr17 6475427 6475690 -83028863 - L1MB8 LINE L1 -1 6177 5936 748 211 9 72 chr17 6475689 6475794 -83028759 - L1MDa LINE L1 -5306 1234 1149 * 2450 175 38 9 chr17 6475794 6476246 -83028307 - MLT1C LTR MaLR 0 467 3 748 211 9 72 chr17 6476246 6476363 -83028190 - L1MDa LINE L1 -5391 1149 1026 1490 181 199 6 chr17 6476363 6476530 -83028023 - MSTD LTR MaLR 0 396 263 186 43 0 0 chr17 6476530 6476553 -83028000 + (GA)n Simple_repeat Simple_repeat 2 24 0 1490 181 199 6 chr17 6476553 6476716 -83027837 - MSTD LTR MaLR -133 263 2 2000 231 87 57 chr17 6476716 6477529 -83027024 - L1MDa LINE L1 -5509 1031 23 440 308 21 12 chr17 6477560 6477751 -83026802 - L1 LINE L1 -2281 3865 3668 219 114 0 0 chr17 6478022 6478057 -83026496 + (T)n Simple_repeat Simple_repeat 1 35 0 578 320 119 50 chr17 6478188 6478826 -83025727 - L1 LINE L1 -2764 3382 2701 221 240 0 0 chr17 6479113 6479163 -83025390 + GA-rich Low_complexity Low_complexity 2 51 0 1753 120 0 0 chr17 6479386 6479636 -83024917 - AluSc SINE Alu -5 304 55 947 264 28 0 chr17 6480124 6480336 -83024217 + MIR SINE MIR 45 262 0 1567 169 196 88 chr17 6480816 6481347 -83023206 + LTR4 LTR ERV1 1 588 0 2086 259 87 32 chr17 6481802 6482185 -83022368 - HAL1 LINE L1 0 2507 2146 2010 154 3 0 chr17 6482185 6482491 -83022062 - AluSx SINE Alu -5 307 1 2086 259 87 32 chr17 6482491 6483004 -83021549 - HAL1 LINE L1 -361 2146 1562 1860 257 174 38 chr17 6483000 6483288 -83021265 - HAL1 LINE L1 -1165 1342 1095 * 2059 119 3 3 chr17 6483288 6483581 -83020972 - AluSc SINE Alu -16 293 1 1860 257 174 38 chr17 6483581 6483612 -83020941 - HAL1 LINE L1 -1412 1095 1070 3510 108 61 34 chr17 6483612 6483915 -83020638 + MER4B LTR ERV1 1 294 -316 2289 95 0 0 chr17 6483915 6484219 -83020334 - AluY SINE Alu -7 304 1 3510 108 61 34 chr17 6484219 6484509 -83020044 + MER4B LTR ERV1 294 610 0 1860 257 174 38 chr17 6484509 6485362 -83019191 - HAL1 LINE L1 -1437 1070 9 587 256 103 91 chr17 6485362 6485431 -83019122 - L1ME4a LINE L1 -3 6118 6051 2104 112 0 0 chr17 6485431 6485718 -83018835 + AluSx SINE Alu 26 312 0 587 256 103 91 chr17 6485718 6485934 -83018619 - L1ME4a LINE L1 -70 6051 5824 2284 82 3 0 chr17 6485934 6486228 -83018325 + AluSp SINE Alu 1 295 -18 587 256 103 91 chr17 6486228 6486359 -83018194 - L1ME4a LINE L1 -297 5824 5696 319 149 104 15 chr17 6486371 6486438 -83018115 + MER5B DNA MER1_type 72 144 -34 281 322 114 31 chr17 6486455 6486744 -83017809 - L1ME4a LINE L1 -2150 5658 5346 207 0 0 0 chr17 6487021 6487044 -83017509 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2165 110 7 0 chr17 6487360 6487661 -83016892 - AluSx SINE Alu -9 303 1 797 216 42 6 chr17 6487914 6488081 -83016472 + MER5B DNA MER1_type 5 177 -1 343 217 250 0 chr17 6489016 6489136 -83015417 + MER5A DNA MER1_type 13 162 -27 528 223 54 34 chr17 6489142 6489290 -83015263 - MIR SINE MIR -110 152 2 228 274 81 40 chr17 6489389 6489513 -83015040 - L2 LINE L2 -212 3060 2932 1421 181 48 15 chr17 6490006 6490468 -83014085 - MER92B LTR ERV1 -2 552 1 401 263 54 70 chr17 6490844 6491030 -83013523 + MER5A DNA MER1_type 1 183 -6 * 425 289 58 28 chr17 6491018 6491339 -83013214 - L2 LINE L2 -215 3057 2727 433 333 88 5 chr17 6492527 6492743 -83011810 + L3 LINE CR1 1344 1577 0 368 261 185 0 chr17 6493257 6493376 -83011177 - MIR SINE MIR -5 257 117 3222 141 49 37 chr17 6493909 6494483 -83010070 - LTR1 LTR ERV1 -2 783 203 885 98 0 0 chr17 6494536 6494658 -83009895 - AluSq SINE Alu -13 300 179 676 91 0 0 chr17 6494658 6494746 -83009807 - AluSq SINE Alu -218 95 8 1101 93 115 11 chr17 6494746 6494928 -83009625 - LTR1 LTR ERV1 -584 201 1 299 196 22 76 chr17 6494990 6495048 -83009505 + HAL1 LINE L1 2409 2462 -45 1738 166 0 20 chr17 6495048 6495349 -83009204 - AluJo SINE Alu -17 295 1 299 196 22 76 chr17 6495349 6495382 -83009171 + HAL1 LINE L1 2462 2495 -12 1595 113 13 0 chr17 6495598 6495829 -83008724 - AluY SINE Alu -5 306 73 859 215 80 52 chr17 6496306 6496557 -83007996 + MIR SINE MIR 5 262 0 294 277 175 15 chr17 6496866 6497003 -83007550 - MER5A DNA MER1_type 0 189 31 2211 268 32 35 chr17 6498493 6499237 -83005316 + L1ME LINE L1 13 754 -5316 1733 15 0 0 chr17 6499341 6499538 -83005015 - L1P LINE L1 -1040 5106 4910 12060 26 1 2 chr17 6499538 6500947 -83003606 + L1P LINE L1 3515 4921 -1225 1645 113 41 15 chr17 6501066 6501141 -83003412 - L1PB3 LINE L1 -286 5868 5796 216 0 0 0 chr17 6501141 6501165 -83003388 + (CA)n Simple_repeat Simple_repeat 2 25 0 1645 113 41 15 chr17 6501165 6501355 -83003198 - L1PB3 LINE L1 -358 5796 5596 347 227 35 35 chr17 6501464 6501605 -83002948 - L1M4 LINE L1 -1481 4665 4525 991 265 0 0 chr17 6501741 6501964 -83002589 - MER58A DNA MER1_type 0 224 2 7965 17 0 4 chr17 6502071 6503097 -83001456 - L1PA3 LINE L1 -3 6152 5127 513 261 8 39 chr17 6503290 6503420 -83001133 - L2 LINE L2 -4 3309 3184 876 123 0 0 chr17 6503504 6503626 -83000927 + AluSq/x SINE Alu 14 135 -177 2125 132 0 0 chr17 6503626 6503936 -83000617 + AluSx SINE Alu 1 310 -2 2990 136 6 6 chr17 6503956 6504441 -83000112 + L1PA16 LINE L1 5682 6166 0 301 345 18 30 chr17 6504472 6504640 -82999913 - L2 LINE L2 -260 3053 2888 1832 164 59 0 chr17 6504791 6505114 -82999439 - MER54B LTR ERVL -451 342 1 199 265 61 10 chr17 6505167 6505265 -82999288 + L2 LINE L2 2853 2955 -317 233 271 0 12 chr17 6505692 6505777 -82998776 + GA-rich Low_complexity Low_complexity 1 84 0 384 326 98 36 chr17 6505779 6506601 -82997952 - L2 LINE L2 -82 3190 2316 302 336 18 0 chr17 6507870 6507983 -82996570 + MIR SINE MIR 34 148 -114 308 238 12 12 chr17 6508198 6508278 -82996275 + MIR SINE MIR 70 149 -113 2222 95 0 7 chr17 6508297 6508601 -82995952 - AluSg1 SINE Alu -7 302 1 1632 167 7 23 chr17 6508636 6508935 -82995618 + AluJb SINE Alu 1 294 -18 1288 237 219 9 chr17 6508950 6509406 -82995147 + L1MC4a LINE L1 7252 7803 -5 21 36 0 0 chr17 6509406 6509434 -82995119 + AT_rich Low_complexity Low_complexity 1 28 0 260 238 71 79 chr17 6510626 6510752 -82993801 + MIR SINE MIR 1 129 -79 292 271 12 12 chr17 6510944 6511029 -82993524 - L2 LINE L2 -31 3282 3198 688 271 52 49 chr17 6511200 6511548 -82993005 - L1MC/D LINE L1 -452 5669 5334 1670 141 65 3 chr17 6511648 6511938 -82992615 + AluSx SINE Alu 1 308 -4 3088 190 75 35 chr17 6513155 6513428 -82991125 - L1MB7 LINE L1 0 6184 5923 2430 50 3 0 chr17 6513428 6513729 -82990824 + AluY SINE Alu 1 302 -9 3088 190 75 35 chr17 6513729 6514232 -82990321 - L1MB7 LINE L1 -261 5923 5377 260 299 171 17 chr17 6514318 6514552 -82990001 - L1MC/D LINE L1 -1927 5881 5612 350 304 28 112 chr17 6514653 6514797 -82989756 + L3 LINE CR1 1381 1503 -74 2124 95 0 14 chr17 6514797 6515092 -82989461 - AluSx SINE Alu -19 293 3 350 304 28 112 chr17 6515092 6515161 -82989392 + L3 LINE CR1 1503 1576 -1 885 63 0 0 chr17 6515966 6516077 -82988476 - AluSc SINE Alu -10 299 189 2181 109 0 0 chr17 6516077 6516380 -82988173 + AluSg SINE Alu 3 305 -5 650 189 43 113 chr17 6516449 6516634 -82987919 + MER5B DNA MER1_type 7 178 0 270 282 13 0 chr17 6517149 6517227 -82987326 + MIR SINE MIR 57 135 -73 252 329 50 21 chr17 6517230 6517370 -82987183 - L3 LINE CR1 -137 1440 1297 2102 79 4 0 chr17 6517608 6517902 -82986651 + AluSx SINE Alu 16 310 0 602 298 124 3 chr17 6517971 6518330 -82986223 + L2 LINE L2 2623 3029 -284 1714 87 0 0 chr17 6518332 6518551 -82986002 - AluSg/x SINE Alu -19 293 75 395 119 0 0 chr17 6518552 6518611 -82985942 + AluS SINE Alu 5 63 -238 651 206 99 110 chr17 6518611 6518903 -82985650 + L2 LINE L2 3024 3312 -1 373 306 32 48 chr17 6518905 6519091 -82985462 + MIR SINE MIR 23 205 -57 2079 110 19 13 chr17 6519838 6520147 -82984406 - AluSx SINE Alu -1 311 1 681 214 146 89 chr17 6520157 6520493 -82984060 - L1ME3A LINE L1 0 6170 5816 238 195 110 0 chr17 6520862 6520944 -82983609 - L1ME LINE L1 -314 5856 5766 3764 122 14 4 chr17 6521045 6521595 -82982958 - LTR9B LTR ERV1 0 644 89 2204 71 10 3 chr17 6521595 6521892 -82982661 + AluY SINE Alu 1 299 -12 780 218 62 25 chr17 6521892 6522185 -82982368 - L1ME LINE L1 -639 5525 5224 421 322 105 34 chr17 6522242 6522570 -82981983 - L1ME LINE L1 -1276 4870 4531 1169 188 19 5 chr17 6523036 6523249 -82981304 - MER20 DNA MER1_type -3 216 1 556 294 84 33 chr17 6523550 6523849 -82980704 - MLT1K LTR MaLR 0 588 275 582 306 62 36 chr17 6524144 6524811 -82979742 - L1ME LINE L1 -2177 3969 3286 670 145 97 32 chr17 6525091 6525215 -82979338 + FLAM_C SINE Alu 1 132 -1 412 269 80 71 chr17 6526130 6526368 -82978185 - L1ME LINE L1 -3123 3023 2784 706 253 99 35 chr17 6526439 6526814 -82977739 - HAL1 LINE L1 -1012 1495 1097 1161 191 74 0 chr17 6526833 6527067 -82977486 + L1MB5 LINE L1 5858 6108 -66 460 290 52 72 chr17 6527167 6527322 -82977231 - HAL1 LINE L1 -1433 1074 917 23 33 0 0 chr17 6527322 6527352 -82977201 + AT_rich Low_complexity Low_complexity 1 30 0 460 290 52 72 chr17 6527352 6527376 -82977177 - HAL1 LINE L1 -1590 917 894 2712 167 105 8 chr17 6527376 6527890 -82976663 + MLT1F1 LTR MaLR 4 567 0 460 290 52 72 chr17 6527890 6528028 -82976525 - HAL1 LINE L1 -1613 894 734 2076 125 0 4 chr17 6528401 6528680 -82975873 - AluSx SINE Alu -34 278 1 2302 100 0 0 chr17 6528958 6529249 -82975304 - AluSg SINE Alu -19 291 1 1035 213 0 82 chr17 6529316 6529560 -82974993 - MER58A DNA MER1_type 0 224 1 449 250 91 0 chr17 6529592 6529724 -82974829 + L1MD2 LINE L1 6211 6354 -5 1096 76 0 0 chr17 6529775 6529906 -82974647 + AluSp SINE Alu 2 132 -181 2294 96 13 0 chr17 6529908 6530210 -82974343 + AluSp SINE Alu 1 306 -7 974 156 6 31 chr17 6530540 6530700 -82973853 - FRAM SINE Alu -18 158 3 347 261 17 34 chr17 6531131 6531250 -82973303 - L2 LINE L2 -11 3261 3145 2471 91 0 0 chr17 6531859 6532168 -82972385 + AluSg SINE Alu 1 309 -1 182 194 0 0 chr17 6532404 6532440 -82972113 - L2 LINE L2 0 3313 3278 689 248 143 24 chr17 6532566 6533006 -82971547 - L2 LINE L2 -71 3242 2741 2385 79 0 3 chr17 6533009 6533300 -82971253 + AluSq SINE Alu 1 290 -23 457 121 33 0 chr17 6533300 6533391 -82971162 + G-rich Low_complexity Low_complexity 2 95 0 533 206 99 110 chr17 6533577 6533869 -82970684 - L2 LINE L2 -1 3312 3024 443 129 0 0 chr17 6533869 6533931 -82970622 - AluS SINE Alu -248 63 2 743 256 89 4 chr17 6533931 6534201 -82970352 - L2 LINE L2 -769 2545 2253 2297 95 0 13 chr17 6535674 6535979 -82968574 - AluY SINE Alu -10 301 1 267 319 25 8 chr17 6536156 6536275 -82968278 - MIR SINE MIR -29 233 113 378 303 36 18 chr17 6538150 6538315 -82966238 - L3 LINE CR1 -37 1540 1373 1686 263 70 92 chr17 6538585 6540061 -82964492 + L1MEc LINE L1 837 2237 -3978 983 234 128 35 chr17 6540061 6540104 -82964449 + L1M4 LINE L1 4287 4325 -1821 2322 115 0 0 chr17 6540104 6540408 -82964145 + AluSg SINE Alu 1 304 -6 983 234 128 35 chr17 6540408 6540740 -82963813 + L1M4 LINE L1 4325 4697 -1449 5539 148 50 35 chr17 6540747 6541139 -82963414 - Tigger3b DNA MER2_type -1797 1231 846 2276 117 0 0 chr17 6541139 6541448 -82963105 - AluSc SINE Alu 0 309 1 5539 148 50 35 chr17 6541448 6541691 -82962862 - Tigger3b DNA MER2_type -2182 846 608 189 0 0 0 chr17 6541691 6541712 -82962841 + (TATG)n Simple_repeat Simple_repeat 4 24 0 5539 148 50 35 chr17 6541712 6542002 -82962551 - Tigger3b DNA MER2_type -2420 608 286 2051 124 0 54 chr17 6542002 6542317 -82962236 + AluSq SINE Alu 1 298 -15 5539 148 50 35 chr17 6542317 6542431 -82962122 - Tigger3b DNA MER2_type -2742 286 175 1565 211 54 30 chr17 6542519 6543053 -82961500 + L1M4 LINE L1 4749 5343 -803 2574 68 0 3 chr17 6543078 6543385 -82961168 - AluY SINE Alu -5 306 1 1241 114 51 0 chr17 6543385 6543561 -82960992 - AluSg/x SINE Alu -3 309 125 378 291 7 11 chr17 6543610 6543760 -82960793 + MIR SINE MIR 21 168 -60 2745 42 0 0 chr17 6545067 6545377 -82959176 + AluY SINE Alu 1 310 -1 286 270 0 14 chr17 6545660 6545734 -82958819 - MIR SINE MIR -143 119 47 263 221 70 35 chr17 6546164 6546250 -82958303 - MIR SINE MIR -81 181 93 284 287 31 23 chr17 6546509 6546638 -82957915 + MIR3 SINE MIR 41 170 -38 1092 124 18 0 chr17 6546655 6546943 -82957610 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 1029 227 10 0 chr17 6546994 6547192 -82957361 - MER58A DNA MER1_type -24 200 1 256 269 74 9 chr17 6547397 6547505 -82957048 - L2 LINE L2 -327 2986 2872 601 185 29 0 chr17 6548336 6548509 -82956044 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 772 110 25 12 chr17 6548542 6548705 -82955848 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1285 110 0 0 chr17 6548732 6548905 -82955648 - AluSp SINE Alu -1 312 140 578 276 0 0 chr17 6549257 6549402 -82955151 + MIR SINE MIR 94 238 -24 202 320 96 32 chr17 6549990 6550209 -82954344 - L3 LINE CR1 -56 1521 1289 446 273 103 56 chr17 6550355 6550438 -82954115 + MLT1H LTR MaLR 25 103 -446 2255 85 0 10 chr17 6550438 6550731 -82953822 - AluSg SINE Alu -20 290 1 446 273 103 56 chr17 6550731 6551100 -82953453 + MLT1H LTR MaLR 103 543 -6 286 318 95 24 chr17 6551174 6551300 -82953253 + MIR3 SINE MIR 49 183 -25 2049 125 0 3 chr17 6551727 6552014 -82952539 - AluSx SINE Alu -26 286 1 231 308 53 24 chr17 6552339 6552508 -82952045 + L1MDa LINE L1 1534 1707 -4833 196 213 128 0 chr17 6552543 6552590 -82951963 - L2 LINE L2 0 3313 3261 282 114 10 44 chr17 6553462 6553514 -82951039 - MLT2C1 LTR ERVL 0 520 347 2450 150 61 74 chr17 6553589 6553698 -82950855 + LTR44 LTR ERV1 1 110 -409 2339 88 7 13 chr17 6553698 6554005 -82950548 - AluSx SINE Alu -7 305 1 2450 150 61 74 chr17 6554005 6554421 -82950132 + LTR44 LTR ERV1 110 519 0 2384 160 15 75 chr17 6555378 6555915 -82948638 + LTR57-int LTR ERVL 311 815 -4528 557 132 142 0 chr17 6555915 6556021 -82948532 + LTR49-int LTR ERV1 951 1071 -7049 * 785 235 53 30 chr17 6555981 6556245 -82948308 + LTR57-int LTR ERVL 1322 1591 -3752 * 1813 179 28 37 chr17 6556011 6556448 -82948105 + LTR49-int LTR ERV1 1317 1749 -6371 1316 171 100 150 chr17 6556460 6557282 -82947271 + LTR49-int LTR ERV1 2950 3730 -2868 2234 219 100 52 chr17 6557354 6557803 -82946750 + LTR49-int LTR ERV1 2477 2903 -3335 244 33 0 0 chr17 6557803 6557833 -82946720 + HSMAR1 DNA Mariner 1 30 -1257 2234 219 100 52 chr17 6557833 6558228 -82946325 + LTR49-int LTR ERV1 2903 3278 -2960 1868 141 0 14 chr17 6558228 6558518 -82946035 - AluSx SINE Alu -14 298 13 2234 219 100 52 chr17 6558518 6558914 -82945639 + LTR49-int LTR ERV1 3278 4964 -1274 2798 135 59 43 chr17 6559183 6559280 -82945273 + LTR44 LTR ERV1 1 95 -424 2554 54 0 0 chr17 6559280 6559576 -82944977 - AluY SINE Alu -15 296 1 2798 135 59 43 chr17 6559576 6559989 -82944564 + LTR44 LTR ERV1 95 519 0 1700 210 25 6 chr17 6559995 6560348 -82944205 - MLT2D LTR ERVL -54 360 1 2369 69 24 0 chr17 6560577 6560867 -82943686 + AluSc SINE Alu 1 297 -12 492 303 154 0 chr17 6560903 6561111 -82943442 - MIR SINE MIR -21 241 2 242 239 80 11 chr17 6561461 6561549 -82943004 - L2 LINE L2 -42 3230 3137 609 254 71 61 chr17 6561587 6561653 -82942900 - LTR16C LTR ERVL -28 463 399 2219 107 0 26 chr17 6561653 6561963 -82942590 + AluSx SINE Alu 1 302 -10 609 254 71 61 chr17 6561963 6562176 -82942377 - LTR16C LTR ERVL -92 399 181 2233 104 0 3 chr17 6562865 6563162 -82941391 - AluSq SINE Alu -4 309 14 362 299 21 36 chr17 6563258 6563452 -82941101 - L2 LINE L2 -2075 1239 1049 21 0 0 0 chr17 6563831 6563852 -82940701 + AT_rich Low_complexity Low_complexity 1 21 0 2578 62 0 0 chr17 6564363 6564672 -82939881 - AluY SINE Alu -2 309 1 575 171 117 0 chr17 6564744 6564855 -82939698 - MSTA LTR MaLR 0 428 305 3398 116 40 78 chr17 6564861 6565493 -82939060 - LTR1 LTR ERV1 0 785 178 29 47 0 0 chr17 6565523 6565566 -82938987 + AT_rich Low_complexity Low_complexity 1 43 0 330 86 32 75 chr17 6565583 6565769 -82938784 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 * 348 111 64 23 chr17 6565728 6565899 -82938654 + (TA)n Simple_repeat Simple_repeat 1 178 0 210 235 12 25 chr17 6565900 6565981 -82938572 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 211 74 56 68 chr17 6565994 6566156 -82938397 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2069 183 112 9 chr17 6566156 6567196 -82937357 - SATR1 Satellite Satellite -5 1147 1 1950 103 0 4 chr17 6567196 6567448 -82937105 - AluSq SINE Alu -62 251 1 1647 138 0 66 chr17 6567457 6567772 -82936781 - AluSg SINE Alu 0 310 20 935 128 78 11 chr17 6567780 6567960 -82936593 - LTR1 LTR ERV1 -593 192 1 1554 136 23 58 chr17 6567960 6568268 -82936285 - MSTA LTR MaLR -131 297 1 258 32 0 0 chr17 6568311 6568342 -82936211 + (TG)n Simple_repeat Simple_repeat 2 32 0 856 299 60 20 chr17 6568355 6569356 -82935197 - L1MC4a LINE L1 -529 5710 4957 1353 226 14 44 chr17 6569527 6569890 -82934663 - MLT1A1 LTR MaLR 0 365 14 1941 126 58 3 chr17 6570008 6570301 -82934252 - AluSx SINE Alu -3 309 1 664 97 0 124 chr17 6570402 6570547 -82934006 - AluY SINE Alu 0 311 185 1020 307 128 22 chr17 6570548 6571460 -82933093 - L1MC4a LINE L1 -4326 2070 1062 2180 128 3 0 chr17 6571483 6571781 -82932772 - AluY SINE Alu -12 299 1 29 0 0 0 chr17 6572222 6572251 -82932302 + AT_rich Low_complexity Low_complexity 1 29 0 1678 120 89 0 chr17 6572251 6572509 -82932044 - L1PB3 LINE L1 -7 6147 5867 581 325 81 42 chr17 6572674 6573770 -82930783 - L1M4 LINE L1 -1872 4274 3136 390 167 14 14 chr17 6574241 6574313 -82930240 - MER68 LTR ERV1 -227 335 264 2282 117 0 0 chr17 6574904 6575204 -82929349 - AluSx SINE Alu -12 300 1 2759 195 19 35 chr17 6575401 6575971 -82928582 - MER68 LTR ERV1 0 562 2 2560 68 0 0 chr17 6576384 6576694 -82927859 - AluY SINE Alu -1 310 1 443 339 50 21 chr17 6576718 6577001 -82927552 + L2 LINE L2 2200 2490 -824 403 207 112 17 chr17 6577017 6577133 -82927420 - MLT1H LTR MaLR -2 547 421 487 293 122 11 chr17 6577150 6577338 -82927215 - MLT1H LTR MaLR -328 221 13 313 367 103 33 chr17 6577379 6577909 -82926644 + L2 LINE L2 2549 3129 -143 637 181 0 0 chr17 6577978 6578083 -82926470 + MER58B DNA MER1_type 225 329 -12 1080 218 5 0 chr17 6578809 6579020 -82925533 + MER58A DNA MER1_type 1 212 -12 772 115 0 44 chr17 6580446 6580559 -82923994 - AluSg/x SINE Alu -27 285 178 300 292 0 34 chr17 6580564 6580653 -82923900 + MIR SINE MIR 106 191 -71 2300 107 0 7 chr17 6580750 6581049 -82923504 - AluSx SINE Alu -15 297 1 1758 148 0 21 chr17 6581925 6582209 -82922344 - AluSc SINE Alu -3 306 29 311 302 87 8 chr17 6583081 6583207 -82921346 + MIR3 SINE MIR 69 204 -4 1033 49 18 18 chr17 6583336 6583499 -82921054 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 337 130 43 0 chr17 6583507 6583576 -82920977 + CT-rich Low_complexity Low_complexity 2 73 0 1937 173 3 25 chr17 6583576 6583894 -82920659 - AluJo SINE Alu -1 311 1 617 363 116 3 chr17 6584215 6584604 -82919949 - L3 LINE CR1 -1 1576 1144 366 289 134 34 chr17 6584869 6585018 -82919535 - MIR3 SINE MIR -11 197 34 420 327 61 6 chr17 6585676 6585841 -82918712 + MIR SINE MIR 33 206 -56 555 200 9 0 chr17 6586012 6586122 -82918431 - MIR SINE MIR 0 262 152 1148 178 22 18 chr17 6586123 6586348 -82918205 + MER46A DNA MER2_type 3 228 -8 288 290 120 0 chr17 6586354 6586454 -82918099 - MIR SINE MIR -108 154 43 339 311 114 0 chr17 6586502 6586598 -82917955 - HAL1 LINE L1 -1016 1491 1375 2401 103 3 0 chr17 6586598 6586910 -82917643 - AluSp SINE Alu 0 313 1 339 311 114 0 chr17 6586910 6586945 -82917608 - HAL1 LINE L1 -1132 1375 1345 300 339 52 22 chr17 6586947 6587310 -82917243 - L1MEd LINE L1 -4886 1233 860 2248 131 0 6 chr17 6587854 6588168 -82916385 - AluSx SINE Alu 0 312 1 32 43 0 0 chr17 6588269 6588315 -82916238 + AT_rich Low_complexity Low_complexity 1 46 0 2214 97 0 58 chr17 6588517 6588847 -82915706 - AluSx SINE Alu -1 311 1 188 67 33 0 chr17 6590271 6590301 -82914252 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2318 79 10 0 chr17 6590303 6590593 -82913960 - AluSp SINE Alu -20 293 1 189 0 0 0 chr17 6591034 6591055 -82913498 + (T)n Simple_repeat Simple_repeat 1 21 0 864 198 45 124 chr17 6591577 6591750 -82912803 + MLT1B LTR MaLR 2 187 -203 2256 84 16 26 chr17 6591750 6592059 -82912494 + AluY SINE Alu 1 306 -5 864 198 45 124 chr17 6592059 6592179 -82912374 + MLT1B LTR MaLR 187 265 -125 2051 127 21 3 chr17 6592179 6592470 -82912083 + AluSx SINE Alu 1 296 -16 864 198 45 124 chr17 6592470 6592529 -82912024 + MLT1B LTR MaLR 265 327 -63 330 306 61 16 chr17 6592721 6592869 -82911684 - MIR SINE MIR -61 147 33 304 152 0 0 chr17 6595865 6595911 -82908642 + MER46A DNA MER2_type 1 46 -190 576 244 99 112 chr17 6596547 6597011 -82907542 + LTR33A LTR ERVL 66 523 0 433 308 103 52 chr17 6597077 6597521 -82907032 + L2 LINE L2 2460 2955 -317 2293 110 3 0 chr17 6597521 6597821 -82906732 - AluSx SINE Alu -11 301 1 433 308 103 52 chr17 6597821 6598130 -82906423 + L2 LINE L2 2955 3247 -25 927 148 228 0 chr17 6598844 6599033 -82905520 + MER46A DNA MER2_type 1 232 -4 1172 245 52 16 chr17 6599103 6599449 -82905104 + L1MD2 LINE L1 5978 6339 -20 2261 104 3 0 chr17 6599449 6599738 -82904815 - AluSg SINE Alu -20 290 1 1172 245 52 16 chr17 6599738 6599759 -82904794 + L1MD2 LINE L1 6339 6358 -1 459 152 0 0 chr17 6600527 6600606 -82903947 + (TG)n Simple_repeat Simple_repeat 1 79 0 316 323 57 31 chr17 6600783 6600975 -82903578 + MIR3 SINE MIR 1 197 -11 720 294 97 32 chr17 6601190 6601499 -82903054 - L3 LINE CR1 -106 1471 1143 2602 77 3 0 chr17 6601506 6601816 -82902737 - AluSp SINE Alu -2 311 1 228 292 52 0 chr17 6602123 6602219 -82902334 - L1ME LINE L1 -331 5790 5690 358 258 116 32 chr17 6602486 6602641 -82901912 + MIR SINE MIR 1 168 -94 1543 223 108 7 chr17 6602671 6603116 -82901437 - MLT1D LTR MaLR 0 505 16 1389 247 105 70 chr17 6603147 6603747 -82900806 + L2 LINE L2 2110 2730 -584 294 118 0 0 chr17 6604492 6604543 -82900010 - L1MB2 LINE L1 -1 6170 6120 2138 124 7 13 chr17 6604543 6604842 -82899711 - AluSq SINE Alu -16 297 1 373 297 120 0 chr17 6605783 6605958 -82898595 + MIR SINE MIR 51 246 -16 5102 56 0 0 chr17 6606372 6606993 -82897560 - L1PA8 LINE L1 0 6172 5552 180 250 0 0 chr17 6607087 6607123 -82897430 - MIR SINE MIR -70 192 157 375 23 0 0 chr17 6607280 6607324 -82897229 + (CA)n Simple_repeat Simple_repeat 2 45 0 1627 195 74 39 chr17 6607629 6607897 -82896656 - MLT1D LTR MaLR -4 501 209 204 67 0 0 chr17 6607897 6607927 -82896626 + (CACAT)n Simple_repeat Simple_repeat 4 33 0 1627 195 74 39 chr17 6607927 6608120 -82896433 - MLT1D LTR MaLR -296 209 24 2332 207 30 18 chr17 6608608 6609110 -82895443 - LTR40a LTR ERVL -4 515 8 207 149 257 40 chr17 6609172 6609246 -82895307 - MIR SINE MIR -66 196 107 599 320 44 55 chr17 6609301 6609484 -82895069 + ERVL LTR ERVL 4302 4485 -1279 2142 109 35 0 chr17 6609484 6609769 -82894784 - AluSp SINE Alu -18 295 1 599 320 44 55 chr17 6609769 6610041 -82894512 + ERVL LTR ERVL 4485 4752 -1012 353 241 23 11 chr17 6610103 6610190 -82894363 + ERVL LTR ERVL 4894 4981 -783 2091 144 0 0 chr17 6610694 6611000 -82893553 - AluSx SINE Alu -6 306 1 2356 92 0 13 chr17 6611119 6611425 -82893128 - AluSq SINE Alu -11 302 1 3322 152 29 15 chr17 6612014 6612285 -82892268 + L1MB3 LINE L1 5562 5828 -355 2412 95 0 3 chr17 6612285 6612590 -82891963 + AluSq SINE Alu 1 304 -9 3322 152 29 15 chr17 6612590 6612931 -82891622 + L1MB3 LINE L1 5828 6183 0 2277 124 0 3 chr17 6612942 6613256 -82891297 + AluSq SINE Alu 1 313 0 212 353 35 0 chr17 6613836 6613921 -82890632 + MIR SINE MIR 62 149 -59 186 80 9 0 chr17 6614640 6614715 -82889838 + (A)n Simple_repeat Simple_repeat 1 30 0 274 200 67 40 chr17 6614965 6615040 -82889513 - MER5B DNA MER1_type -101 77 1 390 307 200 5 chr17 6616122 6616327 -82888226 + MIR SINE MIR 17 261 -1 777 301 39 52 chr17 6616441 6616879 -82887674 + MLT1K LTR MaLR 140 571 -17 2253 110 0 0 chr17 6617875 6618175 -82886378 + AluY SINE Alu 1 300 -11 2199 124 51 28 chr17 6618481 6618837 -82885716 + THE1B LTR MaLR 1 364 0 2176 115 3 7 chr17 6620363 6620658 -82883895 - AluSq SINE Alu -19 294 1 402 283 134 37 chr17 6620819 6620957 -82883596 - MIR SINE MIR -55 207 45 2532 193 107 4 chr17 6620957 6621374 -82883179 - MLT1F1 LTR MaLR 0 567 86 198 0 0 0 chr17 6621374 6621396 -82883157 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 2532 193 107 4 chr17 6621396 6621492 -82883061 - MLT1F1 LTR MaLR -481 86 1 402 283 134 37 chr17 6621492 6621540 -82883013 - MIR SINE MIR -217 45 3 377 322 131 21 chr17 6621920 6622311 -82882242 + L2 LINE L2 2615 3043 -229 189 0 0 0 chr17 6623580 6623601 -82880952 + (T)n Simple_repeat Simple_repeat 1 21 0 539 262 87 0 chr17 6623849 6624021 -82880532 - LTR33A LTR ERVL -40 483 297 231 316 26 0 chr17 6624240 6624316 -82880237 - L2 LINE L2 -633 2681 2604 732 230 7 0 chr17 6624322 6624474 -82880079 - MLT1E LTR MaLR -8 585 433 422 191 101 0 chr17 6624531 6624620 -82879933 - MLT1E1 LTR MaLR -556 98 1 392 165 24 24 chr17 6624620 6624705 -82879848 - L2 LINE L2 -704 2610 2526 2261 113 0 3 chr17 6625331 6625624 -82878929 - AluSq SINE Alu -17 296 5 458 327 127 9 chr17 6625708 6625845 -82878708 - L2 LINE L2 -276 2996 2877 2050 127 0 17 chr17 6625845 6626145 -82878408 + AluSq SINE Alu 1 295 -18 458 327 127 9 chr17 6626145 6626271 -82878282 - L2 LINE L2 -395 2877 2705 2419 90 0 3 chr17 6627395 6627695 -82876858 - AluSx SINE Alu -13 299 1 426 222 32 56 chr17 6627751 6627774 -82876779 - MIR SINE MIR -131 131 109 2152 211 132 9 chr17 6627774 6628304 -82876249 + MLT1G1 LTR MaLR 1 595 0 426 222 32 56 chr17 6628304 6628406 -82876147 - MIR SINE MIR -153 109 9 201 231 58 0 chr17 6628407 6628459 -82876094 + MIR SINE MIR 194 248 -14 241 317 0 0 chr17 6629248 6629308 -82875245 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 639 251 112 27 chr17 6629315 6629538 -82875015 + MIR SINE MIR 1 242 -20 2046 142 0 40 chr17 6629745 6630068 -82874485 - AluSx SINE Alu -2 310 1 191 233 194 0 chr17 6630135 6630238 -82874315 - MIR SINE MIR -69 193 71 2288 116 0 0 chr17 6630869 6631170 -82873383 - AluSx SINE Alu -11 301 1 2392 97 3 0 chr17 6631405 6631705 -82872848 - AluSp SINE Alu -12 301 1 1438 217 32 32 chr17 6631734 6632075 -82872478 - MER58B DNA MER1_type 0 341 1 1444 43 0 32 chr17 6632452 6632639 -82871914 - L1PA8 LINE L1 -400 5772 5592 2871 71 15 18 chr17 6632639 6633030 -82871523 + L1PA8 LINE L1 5779 6170 -2 24 32 0 0 chr17 6633824 6633855 -82870698 + AT_rich Low_complexity Low_complexity 1 31 0 649 305 102 24 chr17 6634094 6634514 -82870039 + MLT1K LTR MaLR 101 553 -35 207 0 0 0 chr17 6634975 6634998 -82869555 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 248 77 26 0 chr17 6635279 6635318 -82869235 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 8224 194 33 26 chr17 6635328 6637560 -82866993 - L1MC1 LINE L1 -7 6326 4111 2424 61 3 14 chr17 6637560 6637857 -82866696 - AluY SINE Alu -17 294 1 8224 194 33 26 chr17 6637857 6638153 -82866400 - L1MC1 LINE L1 -2222 4111 3819 2488 62 7 7 chr17 6638153 6638460 -82866093 - AluY SINE Alu -4 307 1 8224 194 33 26 chr17 6638460 6639086 -82865467 - L1MC1 LINE L1 -2514 3819 3153 2398 212 11 6 chr17 6639354 6639902 -82864651 + L1 LINE L1 4242 4792 -1354 22 70 0 0 chr17 6639924 6639967 -82864586 + AT_rich Low_complexity Low_complexity 1 43 0 4801 79 5 2 chr17 6639967 6640603 -82863950 - L1PB1 LINE L1 0 6151 5514 394 223 90 42 chr17 6640605 6640771 -82863782 - MLT1D LTR MaLR -219 286 113 916 197 112 5 chr17 6640838 6641017 -82863536 + MSTA LTR MaLR 1 202 -226 1971 98 52 38 chr17 6641017 6641304 -82863249 + AluSx SINE Alu 1 291 -21 2445 102 0 0 chr17 6641314 6641656 -82862897 - L1P LINE L1 -3154 2992 2651 4416 33 0 0 chr17 6641656 6642167 -82862386 + L1PA7 LINE L1 5642 6154 0 1228 159 100 9 chr17 6642171 6642391 -82862162 + MSTA LTR MaLR 187 426 -2 936 203 95 0 chr17 6642411 6642652 -82861901 + L1MA4 LINE L1 6036 6299 -1 1869 137 48 0 chr17 6642684 6642976 -82861577 + AluSp SINE Alu 1 306 -7 2298 118 0 9 chr17 6643714 6644029 -82860524 + AluSx SINE Alu 1 312 0 1919 233 99 8 chr17 6645723 6646229 -82858324 - MLT1H1 LTR MaLR 0 555 4 307 293 47 0 chr17 6646356 6646462 -82858091 + MIR SINE MIR 118 228 -34 305 200 128 124 chr17 6646552 6646802 -82857751 - MER112 DNA MER1_type -9 251 1 257 185 46 169 chr17 6647567 6647762 -82856791 + MLT1K LTR MaLR 408 578 -10 505 239 104 54 chr17 6648778 6649000 -82855553 + MER112 DNA MER1_type 3 235 -25 320 325 62 44 chr17 6649058 6649475 -82855078 - L2 LINE L2 -218 3054 2623 231 280 40 103 chr17 6649526 6649701 -82854852 - MER91A DNA MER1_type -32 164 1 207 303 71 10 chr17 6651114 6651213 -82853340 - MIR SINE MIR -130 132 28 1705 193 58 28 chr17 6652311 6652552 -82852001 + MLT1C LTR MaLR 22 281 -186 1668 102 0 4 chr17 6652552 6652777 -82851776 + AluSq SINE Alu 86 309 -4 1705 193 58 28 chr17 6652777 6652928 -82851625 + MLT1C LTR MaLR 281 426 -41 2269 95 6 25 chr17 6653620 6653935 -82850618 - AluSx SINE Alu -1 311 3 1415 218 51 9 chr17 6654753 6655069 -82849484 + Charlie1a DNA MER1_type 14 342 -1113 2033 67 0 0 chr17 6655085 6655355 -82849198 + AluY SINE Alu 44 313 0 1481 213 45 3 chr17 6655355 6655669 -82848884 - Charlie1a DNA MER1_type -1115 340 14 4380 185 102 18 chr17 6656066 6657107 -82847446 + Charlie1a DNA MER1_type 327 1454 -1 2001 137 42 70 chr17 6657476 6657642 -82846911 + MLT1B LTR MaLR 1 170 -220 2561 65 0 3 chr17 6657642 6657949 -82846604 + AluY SINE Alu 1 306 -5 2001 137 42 70 chr17 6657949 6658183 -82846370 + MLT1B LTR MaLR 170 390 0 1242 200 19 0 chr17 6658517 6658777 -82845776 + MER33 DNA MER1_type 1 265 -59 5277 147 39 4 chr17 6658782 6659814 -82844739 + L1PA8 LINE L1 5111 6174 0 2237 124 8 39 chr17 6659814 6660068 -82844485 + L1PA16 LINE L1 5778 6017 -149 2099 170 75 12 chr17 6660068 6660467 -82844086 + MSTB LTR MaLR 3 426 0 2237 124 8 39 chr17 6660467 6660599 -82843954 + L1PA16 LINE L1 6017 6152 -14 2373 69 0 39 chr17 6661059 6661365 -82843188 - AluYa5 SINE Alu -16 295 2 892 247 11 0 chr17 6661493 6661679 -82842874 + MER5A DNA MER1_type 1 188 -1 884 45 18 0 chr17 6661992 6662104 -82842449 + L1PA5 LINE L1 6039 6152 -2 290 186 29 20 chr17 6662426 6662528 -82842025 + CT-rich Low_complexity Low_complexity 2 104 0 329 250 12 12 chr17 6662579 6662663 -82841890 - MIR SINE MIR -21 241 158 546 206 66 0 chr17 6662767 6662900 -82841653 - MIR SINE MIR -52 156 17 1534 197 14 17 chr17 6663300 6663661 -82840892 + L1P LINE L1 4984 5343 -803 3231 233 36 17 chr17 6664169 6665075 -82839478 - L1ME1 LINE L1 -61 6900 5986 915 138 22 2 chr17 6665075 6665235 -82839318 + L1PB1 LINE L1 5989 6154 0 2451 253 95 29 chr17 6665249 6666685 -82837868 - L1ME1 LINE L1 -954 5987 4387 1312 233 75 30 chr17 6666710 6667233 -82837320 - L1ME1 LINE L1 -3526 3415 2897 7127 248 34 34 chr17 6667680 6668064 -82836489 - L1ME1 LINE L1 -4176 2946 2563 2001 98 4 4 chr17 6668064 6668330 -82836223 - AluSc SINE Alu -13 296 31 7127 248 34 34 chr17 6668330 6670683 -82833870 - L1ME1 LINE L1 -4559 2563 1 1453 208 123 117 chr17 6670781 6671300 -82833253 - MLT1G1 LTR MaLR 0 595 81 1530 172 0 48 chr17 6671300 6671403 -82833150 + AluJb SINE Alu 37 143 -169 2114 114 31 0 chr17 6671403 6671693 -82832860 + AluSq SINE Alu 1 299 -14 596 38 13 0 chr17 6671693 6671772 -82832781 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 1530 172 0 48 chr17 6671772 6671957 -82832596 + AluJb SINE Alu 141 312 0 1453 208 123 117 chr17 6671957 6672028 -82832525 - MLT1G1 LTR MaLR -514 81 1 588 296 22 30 chr17 6672327 6672557 -82831996 + MIR SINE MIR 28 255 -7 2230 101 0 3 chr17 6672558 6672846 -82831707 - AluSx SINE Alu -12 300 14 22 35 0 0 chr17 6673086 6673115 -82831438 + AT_rich Low_complexity Low_complexity 1 29 0 1210 124 0 17 chr17 6673555 6673733 -82830820 - AluSg/x SINE Alu -1 311 137 2464 60 0 3 chr17 6674167 6674478 -82830075 + AluSp SINE Alu 1 310 0 228 326 45 0 chr17 6674872 6674961 -82829592 + MIR SINE MIR 47 139 -69 2869 141 22 13 chr17 6675681 6675786 -82828767 + LTR24 LTR ERV1 10 113 -354 2284 95 24 0 chr17 6675786 6676081 -82828472 - AluSp SINE Alu -11 302 1 2869 141 22 13 chr17 6676081 6676429 -82828124 + LTR24 LTR ERV1 113 467 0 389 276 55 31 chr17 6676449 6676612 -82827941 - L1ME3 LINE L1 -1 6161 5995 321 130 0 0 chr17 6676613 6676659 -82827894 - L1PA5 LINE L1 -202 5952 5907 * 1747 76 25 4 chr17 6676632 6676869 -82827684 + L1PA4 LINE L1 5914 6155 0 247 215 43 21 chr17 6677389 6677482 -82827071 - L1ME3 LINE L1 -69 6093 5999 2217 84 19 0 chr17 6677719 6678109 -82826444 - L1M3 LINE L1 -581 5602 5201 1505 71 0 15 chr17 6678109 6678305 -82826248 + L1PA8 LINE L1 5973 6166 -6 475 61 0 0 chr17 6678245 6678311 -82826242 + L1PA8 LINE L1 6107 6172 0 * 799 188 17 33 chr17 6678308 6678489 -82826064 - L1MC3 LINE L1 -6 7779 7602 * 3995 189 38 6 chr17 6678488 6678934 -82825619 - L1MC3 LINE L1 -457 7328 6845 252 0 0 0 chr17 6678934 6678962 -82825591 + (TG)n Simple_repeat Simple_repeat 2 29 0 3995 189 38 6 chr17 6678962 6679296 -82825257 - L1MC3 LINE L1 -940 6845 6523 588 136 48 0 chr17 6679321 6679424 -82825129 + FRAM SINE Alu 69 176 0 319 148 0 0 chr17 6679428 6679482 -82825071 - L1MC3 LINE L1 -1635 6150 6097 2615 193 105 15 chr17 6679486 6679843 -82824710 - L1MC3 LINE L1 -1265 6520 6197 2084 106 3 3 chr17 6679843 6680135 -82824418 - AluSx SINE Alu -20 292 1 2615 193 105 15 chr17 6680135 6680166 -82824387 - L1MC3 LINE L1 -1588 6197 6170 1458 186 29 11 chr17 6680166 6680440 -82824113 + AluJo SINE Alu 1 279 -33 2615 193 105 15 chr17 6680440 6680728 -82823825 - L1MC3 LINE L1 -1615 6170 5782 2470 173 22 88 chr17 6680737 6680959 -82823594 - MER44D DNA MER2_type -1890 597 362 2051 93 3 45 chr17 6680959 6681270 -82823283 - AluY SINE Alu -13 298 1 2470 173 22 88 chr17 6681270 6681625 -82822928 - MER44D DNA MER2_type -2125 362 3 849 141 4 40 chr17 6681626 6681808 -82822745 - L1MC3 LINE L1 -560 5784 5606 2193 100 0 6 chr17 6681816 6682127 -82822426 + AluSq SINE Alu 5 313 0 5610 243 31 47 chr17 6682135 6682712 -82821841 - L1MC3 LINE L1 -8 7777 7193 2099 124 0 0 chr17 6682712 6683019 -82821534 - AluSx SINE Alu -5 307 1 5610 243 31 47 chr17 6683019 6684193 -82820360 - L1MC3 LINE L1 -592 7193 6053 771 250 72 19 chr17 6684210 6684474 -82820079 - L1ME3A LINE L1 -229 5941 5664 315 283 142 25 chr17 6684513 6684633 -82819920 - L1MEd LINE L1 -5967 152 19 188 353 25 49 chr17 6684706 6684828 -82819725 - MIR3 SINE MIR -75 133 15 224 303 0 15 chr17 6685053 6685119 -82819434 + GA-rich Low_complexity Low_complexity 1 65 0 664 311 78 91 chr17 6687074 6687181 -82817372 + L1M4 LINE L1 2142 2249 -3897 2126 103 7 3 chr17 6687181 6687483 -82817070 + AluSx SINE Alu 1 303 -9 664 311 78 91 chr17 6687483 6688179 -82816374 + L1M4 LINE L1 2249 2935 -3211 2029 71 0 15 chr17 6688192 6688459 -82816094 + AluY SINE Alu 1 263 -48 186 43 0 0 chr17 6688468 6688491 -82816062 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2072 129 0 0 chr17 6688515 6688809 -82815744 + AluSx SINE Alu 1 294 -18 711 325 57 61 chr17 6688813 6689238 -82815315 + L1M4 LINE L1 2956 3378 -2768 280 309 135 39 chr17 6689350 6689415 -82815138 + L2 LINE L2 922 979 -2335 2231 77 3 3 chr17 6689415 6689713 -82814840 - AluY SINE Alu -13 298 1 280 309 135 39 chr17 6689713 6689906 -82814647 + L2 LINE L2 979 1205 -2109 1572 224 132 50 chr17 6690073 6690574 -82813979 + MLT1F LTR MaLR 1 542 0 225 0 0 0 chr17 6690844 6690869 -82813684 + (TG)n Simple_repeat Simple_repeat 2 26 0 452 314 32 11 chr17 6690880 6691068 -82813485 - L1MC4 LINE L1 -130 7912 7721 714 179 0 0 chr17 6691504 6691621 -82812932 - AluJb SINE Alu -194 118 2 1107 228 104 31 chr17 6691760 6692146 -82812407 - L1MC4 LINE L1 -466 7576 7163 22 0 0 0 chr17 6692770 6692792 -82811761 + AT_rich Low_complexity Low_complexity 1 22 0 531 239 18 0 chr17 6693302 6693411 -82811142 - MER81 DNA DNA -3 111 1 201 74 0 0 chr17 6693685 6693712 -82810841 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 299 69 11 chr17 6693714 6693801 -82810752 + L2 LINE L2 1874 1965 -1349 383 259 36 67 chr17 6693803 6694027 -82810526 + L1M4 LINE L1 4229 4445 -1701 856 217 28 0 chr17 6694047 6694227 -82810326 - MER5A DNA MER1_type -4 185 1 461 309 130 30 chr17 6694274 6694743 -82809810 + L2 LINE L2 1982 2497 -817 422 304 8 16 chr17 6695318 6695443 -82809110 + MIR3 SINE MIR 82 205 -3 207 0 0 0 chr17 6695819 6695842 -82808711 + (CA)n Simple_repeat Simple_repeat 2 24 0 1929 212 28 42 chr17 6696129 6696323 -82808230 - L1ME2 LINE L1 -108 6056 5861 1924 131 3 13 chr17 6696323 6696629 -82807924 + AluSq SINE Alu 3 305 -8 1929 212 28 42 chr17 6696629 6696935 -82807618 - L1ME2 LINE L1 -303 5861 5563 199 279 295 23 chr17 6697472 6697601 -82806952 - MIR3 SINE MIR -29 179 16 3558 128 60 15 chr17 6697732 6698316 -82806237 - LTR31 LTR ERV1 -9 610 1 844 171 0 0 chr17 6699448 6699588 -82804965 - LTR31 LTR ERV1 -111 508 369 196 318 30 0 chr17 6700692 6700758 -82803795 - MIR3 SINE MIR -24 184 117 547 209 62 16 chr17 6701359 6701488 -82803065 - Tigger1 DNA MER2_type 0 2418 2284 2648 244 105 45 chr17 6701488 6702576 -82801977 - L1ME3 LINE L1 -275 5887 4866 180 0 0 0 chr17 6702576 6702596 -82801957 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2648 244 105 45 chr17 6702596 6702635 -82801918 - L1ME3 LINE L1 -1296 4866 4831 2770 10 0 0 chr17 6702635 6702946 -82801607 - AluYa5 SINE Alu 0 311 1 2648 244 105 45 chr17 6702946 6703652 -82800901 - L1ME3 LINE L1 -1331 4831 3923 1931 125 11 0 chr17 6703652 6703973 -82800580 + AluSx SINE Alu 1 324 0 2648 244 105 45 chr17 6703973 6704040 -82800513 - L1ME3 LINE L1 -2239 3923 3861 2115 109 3 13 chr17 6704972 6705259 -82799294 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr17 6705259 6705282 -82799271 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2115 109 3 13 chr17 6705282 6705307 -82799246 + AluSg SINE Alu 286 310 0 420 20 0 0 chr17 6706233 6706282 -82798271 + (TG)n Simple_repeat Simple_repeat 1 49 0 243 61 0 0 chr17 6706282 6706315 -82798238 + (TGG)n Simple_repeat Simple_repeat 3 35 0 289 309 90 51 chr17 6706315 6706626 -82797927 - L2 LINE L2 -337 2977 2655 275 275 297 0 chr17 6706602 6706666 -82797887 + MER5A DNA MER1_type 11 55 -134 * 2614 81 23 3 chr17 6706666 6707014 -82797539 - THE1A LTR MaLR 0 355 1 275 275 297 0 chr17 6707014 6707087 -82797466 + MER5A DNA MER1_type 55 189 0 213 362 26 9 chr17 6707116 6707232 -82797321 - L2 LINE L2 -639 2675 2558 276 233 93 35 chr17 6708353 6708439 -82796114 - L2 LINE L2 -40 3232 3142 225 298 54 127 chr17 6708798 6709184 -82795369 - L2 LINE L2 -94 3178 2821 193 332 142 40 chr17 6709717 6709970 -82794583 - L2 LINE L2 -99 3173 2895 644 204 0 0 chr17 6709999 6710112 -82794441 + Charlie3 DNA MER1_type 1 113 -2597 1962 126 0 16 chr17 6710112 6710429 -82794124 - AluSx SINE Alu 0 312 1 1651 274 88 32 chr17 6710440 6710791 -82793762 - L2 LINE L2 -243 3070 2740 2092 107 24 0 chr17 6710791 6711081 -82793472 + AluSx SINE Alu 1 297 -15 1651 274 88 32 chr17 6711081 6711438 -82793115 - L2 LINE L2 -573 2740 2316 643 290 71 25 chr17 6711773 6711914 -82792639 + MIR SINE MIR 4 162 -100 1317 145 114 77 chr17 6711914 6712266 -82792287 - MLT1A1 LTR MaLR 0 365 1 643 290 71 25 chr17 6712266 6712362 -82792191 + MIR SINE MIR 162 252 -10 2058 121 3 0 chr17 6712393 6712690 -82791863 - AluSq SINE Alu -15 298 1 376 236 13 66 chr17 6713429 6713586 -82790967 + MIR SINE MIR 2 147 -65 1786 170 61 86 chr17 6714081 6714331 -82790222 - MSTB LTR MaLR -7 419 183 2196 101 0 3 chr17 6714331 6714628 -82789925 - AluSx SINE Alu -16 296 1 1786 170 61 86 chr17 6714628 6714806 -82789747 - MSTB LTR MaLR -243 183 2 213 220 51 17 chr17 6715291 6715350 -82789203 - MIR SINE MIR -109 153 93 584 317 58 24 chr17 6716126 6716331 -82788222 - MIR SINE MIR -23 239 28 1894 112 0 0 chr17 6716363 6716631 -82787922 - AluSc SINE Alu 0 309 42 209 238 16 48 chr17 6716974 6717037 -82787516 - L2 LINE L2 -80 3192 3132 1579 225 71 88 chr17 6717179 6717744 -82786809 + MER68 LTR ERV1 2 556 -6 235 316 125 45 chr17 6717753 6718135 -82786418 - L2 LINE L2 -264 3008 2597 1254 151 18 18 chr17 6718370 6718588 -82785965 + MER20 DNA MER1_type 1 218 -1 850 194 15 63 chr17 6718598 6718804 -82785749 + MER3 DNA MER1_type 2 197 -12 534 299 0 7 chr17 6719520 6719667 -82784886 - MIR SINE MIR -95 167 22 2135 117 0 0 chr17 6719668 6719966 -82784587 - AluSx SINE Alu -14 298 1 790 226 26 15 chr17 6720594 6720789 -82783764 - MER117 DNA MER1_type 0 197 1 386 217 11 22 chr17 6720981 6721073 -82783480 - L3 LINE CR1 -97 1480 1390 2296 88 0 0 chr17 6721239 6721545 -82783008 + AluY SINE Alu 1 306 -5 338 250 105 24 chr17 6721586 6721710 -82782843 - L3 LINE CR1 -197 1380 1247 352 275 0 55 chr17 6721916 6722025 -82782528 - L2 LINE L2 -1 3271 3169 303 253 0 58 chr17 6722305 6722343 -82782210 - L1MC4 LINE L1 -1349 6693 6654 1782 114 3 50 chr17 6722343 6722670 -82781883 - AluSx SINE Alu 0 313 1 303 253 0 58 chr17 6722670 6722717 -82781836 - L1MC4 LINE L1 -1388 6654 6612 235 101 13 51 chr17 6722769 6722848 -82781705 + (TA)n Simple_repeat Simple_repeat 2 77 0 2351 167 38 38 chr17 6722850 6723353 -82781200 - L1MB4 LINE L1 -33 6147 5645 1844 173 39 33 chr17 6723417 6723801 -82780752 + MLT1B LTR MaLR 1 418 -8 21 0 0 0 chr17 6723863 6723884 -82780669 + AT_rich Low_complexity Low_complexity 1 21 0 828 173 0 0 chr17 6723933 6724066 -82780487 - FLAM_C SINE Alu 0 133 1 536 283 110 25 chr17 6724296 6724614 -82779939 - L1M4 LINE L1 -1295 4851 4507 22 0 0 0 chr17 6724630 6724652 -82779901 + AT_rich Low_complexity Low_complexity 1 22 0 669 311 161 40 chr17 6724690 6725055 -82779498 - L2 LINE L2 -359 2955 2513 2062 78 35 3 chr17 6725055 6725338 -82779215 + AluSg1 SINE Alu 1 292 -17 669 311 161 40 chr17 6725338 6725470 -82779083 - L2 LINE L2 -801 2513 2398 761 126 0 0 chr17 6726472 6726591 -82777962 + AluSg/x SINE Alu 193 311 -1 2069 116 7 3 chr17 6727790 6728092 -82776461 - AluSg SINE Alu -7 303 1 401 66 16 0 chr17 6728143 6728204 -82776349 + (GA)n Simple_repeat Simple_repeat 2 63 0 637 281 38 19 chr17 6728527 6728737 -82775816 - MIR SINE MIR -3 259 46 483 243 215 0 chr17 6728916 6729060 -82775493 - MER45A DNA AcHobo 0 178 4 217 0 0 0 chr17 6729407 6729431 -82775122 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 946 140 21 0 chr17 6729431 6729574 -82774979 - AluSg/x SINE Alu -1 305 137 271 376 0 32 chr17 6730444 6730630 -82773923 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 282 294 39 0 chr17 6730543 6730645 -82773908 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 2029 123 34 3 chr17 6730724 6731016 -82773537 + AluSx SINE Alu 1 301 -11 303 242 78 47 chr17 6732726 6732854 -82771699 - L2 LINE L2 -7 3265 3134 246 183 0 0 chr17 6732990 6733047 -82771506 - MIR SINE MIR -65 143 96 393 22 0 0 chr17 6733124 6733170 -82771383 + (TG)n Simple_repeat Simple_repeat 2 47 0 2146 90 0 4 chr17 6733170 6733437 -82771116 - AluSq SINE Alu -26 287 22 527 261 55 12 chr17 6734036 6734201 -82770352 + MIR SINE MIR 47 218 -44 2459 56 0 0 chr17 6734513 6734885 -82769668 + AluY SINE Alu 1 372 0 1428 229 8 43 chr17 6735760 6736008 -82768545 + L1MD3 LINE L1 7634 7866 -129 2064 149 0 0 chr17 6736008 6736297 -82768256 + AluSx SINE Alu 1 289 -23 1428 229 8 43 chr17 6736297 6736420 -82768133 + L1MD3 LINE L1 7866 7992 -3 347 329 87 0 chr17 6737089 6737238 -82767315 - MIR3 SINE MIR -30 178 17 288 266 133 90 chr17 6738080 6738358 -82766195 - L2 LINE L2 -2 3311 3022 182 372 0 39 chr17 6738383 6738461 -82766092 + L3 LINE CR1 398 472 -1105 * 332 341 66 24 chr17 6738456 6738623 -82765930 - MIR SINE MIR 0 262 89 302 302 145 17 chr17 6738703 6738875 -82765678 + L3 LINE CR1 473 666 -911 356 318 55 28 chr17 6738920 6739137 -82765416 + L2 LINE L2 2836 3058 -214 384 40 0 0 chr17 6739178 6739228 -82765325 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 539 267 136 30 chr17 6739230 6739742 -82764811 + MLT1L LTR MaLR 10 615 0 180 354 154 15 chr17 6739777 6739907 -82764646 + L2 LINE L2 3124 3271 -1 603 244 60 0 chr17 6740825 6740993 -82763560 + MER45A DNA AcHobo 1 178 0 366 23 0 0 chr17 6741728 6741771 -82762782 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr17 6741770 6741793 -82762760 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 377 39 20 0 chr17 6742116 6742167 -82762386 + (TG)n Simple_repeat Simple_repeat 2 53 0 216 0 0 0 chr17 6742495 6742519 -82762034 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 94 0 0 chr17 6742585 6742649 -82761904 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr17 6742673 6742709 -82761844 + GC_rich Low_complexity Low_complexity 1 36 0 228 75 38 38 chr17 6742731 6742784 -82761769 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 231 245 9 38 chr17 6743155 6743261 -82761292 + G-rich Low_complexity Low_complexity 2 104 0 2087 151 3 6 chr17 6745694 6746006 -82758547 + AluSx SINE Alu 1 311 -1 318 299 19 0 chr17 6746242 6746349 -82758204 + MIR SINE MIR 78 186 -76 310 340 70 19 chr17 6748480 6748695 -82755858 + MIR SINE MIR 29 254 -8 241 286 103 40 chr17 6749243 6749369 -82755184 - L2 LINE L2 -1 3271 3138 2378 98 3 0 chr17 6749443 6749740 -82754813 - AluSc SINE Alu -11 298 1 422 370 65 27 chr17 6750533 6750871 -82753682 - L2 LINE L2 0 3272 2922 288 170 0 0 chr17 6750917 6750970 -82753583 + (TG)n Simple_repeat Simple_repeat 1 53 0 551 291 56 39 chr17 6750982 6751216 -82753337 - L2 LINE L2 -451 2863 2626 604 290 50 23 chr17 6752186 6752407 -82752146 + MIR SINE MIR 13 239 -23 567 264 63 6 chr17 6752466 6752625 -82751928 - MIR SINE MIR -71 191 24 22 42 0 0 chr17 6753310 6753334 -82751219 + GC_rich Low_complexity Low_complexity 1 24 0 2208 107 20 3 chr17 6753804 6754102 -82750451 + AluSx SINE Alu 1 303 -9 692 221 28 17 chr17 6754198 6754379 -82750174 + MER5A DNA MER1_type 2 184 -5 321 197 13 26 chr17 6754495 6754571 -82749982 - MIR SINE MIR -102 160 86 974 208 36 5 chr17 6754574 6754795 -82749758 - LTR16C LTR ERVL -2 489 262 210 353 69 28 chr17 6755097 6755315 -82749238 - L2 LINE L2 -429 2885 2659 281 167 45 30 chr17 6755860 6755926 -82748627 - AluS SINE Alu -237 71 5 897 73 0 9 chr17 6755927 6756036 -82748517 + AluSx SINE Alu 46 153 -159 2277 109 3 0 chr17 6756161 6756465 -82748088 - AluSq SINE Alu -5 308 4 1493 109 37 251 chr17 6756470 6756857 -82747696 + Tigger3(Golem) DNA MER2_type 2497 2679 -350 2376 70 0 10 chr17 6756857 6757157 -82747396 - AluY SINE Alu -14 297 1 1493 109 37 251 chr17 6757157 6757446 -82747107 + Tigger3(Golem) DNA MER2_type 2679 3028 -1 435 309 94 43 chr17 6757508 6757829 -82746724 - L1MDa LINE L1 -3936 2604 2355 1092 215 0 0 chr17 6758087 6758282 -82746271 - MLT1A1 LTR MaLR -2 363 169 333 250 0 0 chr17 6758272 6758340 -82746213 - MLT1A1 LTR MaLR -129 236 169 * 333 250 0 0 chr17 6758330 6758398 -82746155 - MLT1A1 LTR MaLR -129 236 169 * 1314 153 49 5 chr17 6758388 6758611 -82745942 - MLT1A1 LTR MaLR -129 236 4 206 290 138 21 chr17 6758805 6758950 -82745603 - L3 LINE CR1 -108 1469 1308 387 295 12 66 chr17 6759771 6759937 -82744616 + MIR3 SINE MIR 33 189 -19 2634 65 0 0 chr17 6760164 6760471 -82744082 - AluY SINE Alu -4 307 1 237 109 0 43 chr17 6760512 6760558 -82743995 - MIR SINE MIR -102 160 117 315 322 48 7 chr17 6760625 6760771 -82743782 - MIR SINE MIR -99 163 12 435 197 0 0 chr17 6761033 6761109 -82743444 - MER63 DNA MER1_type -84 752 677 593 273 163 22 chr17 6761621 6761984 -82742569 + L2 LINE L2 2899 3312 -1 301 310 56 56 chr17 6762080 6762293 -82742260 + MIR SINE MIR 27 239 -23 683 205 0 18 chr17 6762609 6762775 -82741778 - L1MB5 LINE L1 0 6174 6012 984 181 78 21 chr17 6762790 6763033 -82741520 - L1MD3 LINE L1 -9 7986 7730 499 328 104 27 chr17 6763342 6763717 -82740836 - MLT1I LTR MaLR -1 408 5 2202 107 7 3 chr17 6764089 6764388 -82740165 - AluSc SINE Alu -9 300 1 789 263 109 63 chr17 6764437 6764851 -82739702 + MLT1D LTR MaLR 1 433 -72 254 301 21 11 chr17 6765313 6765406 -82739147 + MIR SINE MIR 30 123 -85 21 0 0 0 chr17 6765643 6765664 -82738889 + AT_rich Low_complexity Low_complexity 1 21 0 2206 119 0 0 chr17 6765747 6766040 -82738513 - AluSx SINE Alu -19 293 1 254 301 42 42 chr17 6766049 6766192 -82738361 + L2 LINE L2 3169 3311 -2 1641 260 47 57 chr17 6766912 6767511 -82737042 - MLT1E LTR MaLR 0 593 1 198 71 0 0 chr17 6768432 6768460 -82736093 + (TC)n Simple_repeat Simple_repeat 1 28 0 1177 130 5 31 chr17 6769581 6769755 -82734798 - AluJb SINE Alu -4 308 138 2140 133 0 3 chr17 6769755 6770049 -82734504 - AluSx SINE Alu -19 293 1 1177 130 5 31 chr17 6770049 6770066 -82734487 - AluJb SINE Alu -174 138 122 320 232 12 49 chr17 6770171 6770253 -82734300 - L1MC4 LINE L1 -1355 6687 6609 484 294 33 80 chr17 6770612 6770735 -82733818 - L1MC4 LINE L1 -2031 5777 5650 2311 97 13 7 chr17 6770735 6771043 -82733510 - AluSg SINE Alu 0 310 1 484 294 33 80 chr17 6771043 6771280 -82733273 - L1MC4 LINE L1 -2158 5650 5434 505 302 34 44 chr17 6772037 6772136 -82732417 - MIR SINE MIR -3 259 160 2194 113 0 13 chr17 6772136 6772437 -82732116 - AluSq SINE Alu -16 297 1 505 302 34 44 chr17 6772437 6772595 -82731958 - MIR SINE MIR -102 160 5 484 319 28 66 chr17 6773092 6773412 -82731141 + L2 LINE L2 2932 3239 -33 1245 109 0 40 chr17 6773421 6773596 -82730957 + AluSx SINE Alu 1 168 -144 446 298 4 8 chr17 6773696 6773931 -82730622 - AluSq SINE Alu -77 236 3 1782 142 0 77 chr17 6774001 6774324 -82730229 - AluSx SINE Alu -12 300 3 340 380 62 6 chr17 6774616 6774795 -82729758 - HAL1 LINE L1 -710 1797 1609 1936 142 48 0 chr17 6775270 6775565 -82728988 + AluSc SINE Alu 1 309 0 194 289 96 0 chr17 6775938 6776021 -82728532 - L2 LINE L2 0 3272 3182 372 266 49 21 chr17 6776031 6776174 -82728379 + MIR3 SINE MIR 4 150 -58 362 237 105 48 chr17 6776226 6776452 -82728101 - MIR SINE MIR -2 260 19 2192 136 0 0 chr17 6776479 6776788 -82727765 - AluSx SINE Alu 0 312 4 300 349 71 0 chr17 6777190 6777316 -82727237 - MIR3 SINE MIR -25 183 49 868 217 4 71 chr17 6777429 6777669 -82726884 - MER58A DNA MER1_type 0 224 1 340 346 82 22 chr17 6777723 6777905 -82726648 + L2 LINE L2 3079 3271 -1 513 182 0 0 chr17 6778252 6778351 -82726202 + (TG)n Simple_repeat Simple_repeat 2 100 0 805 166 0 45 chr17 6778363 6778520 -82726033 + MLT1B LTR MaLR 34 183 -207 767 176 36 24 chr17 6778501 6778666 -82725887 + MLT1B LTR MaLR 298 464 -3 * 2275 88 7 7 chr17 6779468 6779763 -82724790 + AluSg SINE Alu 5 299 -11 733 252 18 91 chr17 6780021 6780295 -82724258 + MIR SINE MIR 9 262 0 303 258 0 0 chr17 6780765 6780831 -82723722 - MIR SINE MIR -65 143 78 364 324 27 60 chr17 6781416 6781601 -82722952 + MIR3 SINE MIR 3 181 -27 268 356 11 0 chr17 6781952 6782039 -82722514 - L2 LINE L2 -64 3208 3121 312 294 117 22 chr17 6782879 6783059 -82721494 - LTR16A1 LTR ERVL -93 364 168 366 80 0 0 chr17 6784159 6784209 -82720344 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 351 271 202 26 chr17 6784240 6784763 -82719790 - L2 LINE L2 -95 3218 2602 387 325 0 4 chr17 6785443 6785679 -82718874 + (CA)n Simple_repeat Simple_repeat 1 234 0 195 42 0 0 chr17 6786232 6786256 -82718297 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 389 317 26 118 chr17 6787156 6787462 -82717091 - L2 LINE L2 -19 3253 2976 330 270 117 55 chr17 6787625 6787953 -82716600 + L1MC5 LINE L1 1958 8032 -209 24 53 0 0 chr17 6787966 6788004 -82716549 + AT_rich Low_complexity Low_complexity 1 38 0 310 293 40 67 chr17 6788445 6788698 -82715855 - L2 LINE L2 -1230 2084 1839 274 215 124 41 chr17 6789436 6789557 -82714996 + MLT1H LTR MaLR 408 538 -11 481 282 28 21 chr17 6790644 6790786 -82713767 + MIR SINE MIR 61 203 -59 235 118 0 0 chr17 6790789 6790823 -82713730 + MLT1L LTR MaLR 4 37 -578 474 279 61 92 chr17 6790866 6790936 -82713617 + MLT1J LTR MaLR 111 182 -329 1824 93 61 83 chr17 6790936 6791248 -82713305 + AluSq SINE Alu 1 305 -8 474 279 61 92 chr17 6791248 6791589 -82712964 + MLT1J LTR MaLR 182 509 -2 2184 119 3 7 chr17 6791707 6792017 -82712536 - AluSg SINE Alu -1 309 1 206 281 0 18 chr17 6792042 6792099 -82712454 - L2 LINE L2 -224 3048 2993 948 239 93 89 chr17 6792983 6793081 -82711472 - MLT1H1 LTR MaLR -10 545 449 2359 113 0 3 chr17 6793081 6793391 -82711162 + AluSq SINE Alu 1 309 -4 948 239 93 89 chr17 6793391 6793867 -82710686 - MLT1H1 LTR MaLR -106 449 1 224 319 43 21 chr17 6795229 6795323 -82709230 + MIR SINE MIR 157 252 -10 610 139 14 36 chr17 6797571 6797857 -82706696 + GA-rich Low_complexity Low_complexity 1 279 0 1080 210 47 0 chr17 6799114 6799328 -82705225 - MIR SINE MIR -12 250 27 205 216 39 0 chr17 6800237 6800288 -82704265 + GA-rich Low_complexity Low_complexity 4 56 0 731 303 138 24 chr17 6800527 6800867 -82703686 - L1MC4a LINE L1 -1908 5900 5522 1990 131 0 67 chr17 6800992 6801320 -82703233 - AluJo SINE Alu -6 306 1 256 189 98 82 chr17 6802164 6802286 -82702267 + LTR9 LTR ERV1 1 124 -488 1958 107 0 36 chr17 6802287 6802595 -82701958 + AluSc SINE Alu 1 297 -12 2242 177 46 13 chr17 6802598 6803056 -82701497 + LTR9B LTR ERV1 170 642 -2 1049 183 48 5 chr17 6803675 6803883 -82700670 - MER20 DNA MER1_type 0 219 3 516 187 90 8 chr17 6804274 6804408 -82700145 + L1ME4a LINE L1 5734 5878 -243 478 247 13 83 chr17 6805849 6806098 -82698455 - L1MC/D LINE L1 -385 5736 5565 386 350 19 31 chr17 6806123 6806283 -82698270 + MIR SINE MIR 28 185 -77 2351 134 39 17 chr17 6807028 6807438 -82697115 - MSTB LTR MaLR 0 426 8 242 272 177 44 chr17 6807439 6807597 -82696956 - MIR3 SINE MIR -27 181 3 684 241 70 10 chr17 6809105 6809304 -82695249 - L2 LINE L2 -222 3091 2881 1914 166 33 14 chr17 6809317 6809594 -82694959 - MLT1B LTR MaLR -16 374 87 2117 117 0 0 chr17 6809594 6809876 -82694677 + AluSx SINE Alu 23 304 -8 1914 166 33 14 chr17 6809876 6809965 -82694588 - MLT1B LTR MaLR -303 87 1 413 257 182 14 chr17 6810951 6811099 -82693454 - MIR SINE MIR -34 228 56 231 286 0 0 chr17 6812984 6813040 -82691513 + MIR SINE MIR 92 147 -61 236 179 0 0 chr17 6813385 6813424 -82691129 - MER5A DNA MER1_type 0 189 151 2333 192 11 45 chr17 6813478 6813771 -82690782 + L1MA5 LINE L1 1356 1621 -5168 2480 95 3 0 chr17 6813771 6814076 -82690477 + AluSq SINE Alu 1 306 -7 2333 192 11 45 chr17 6814076 6814356 -82690197 + L1MA5 LINE L1 1621 1909 -4880 230 217 0 0 chr17 6814356 6814402 -82690151 - L1M2c LINE L1 -4844 1945 1900 * 995 168 20 0 chr17 6814400 6814603 -82689950 + L1MA5 LINE L1 3600 3806 -2982 * 7454 130 22 36 chr17 6814583 6817017 -82687536 + L1MA5 LINE L1 4552 6940 -2 25 23 0 23 chr17 6817017 6817035 -82687518 + AT_rich Low_complexity Low_complexity 1 18 -24 2637 80 0 8 chr17 6817035 6817398 -82687155 - L1PA8 LINE L1 0 6172 5813 25 23 0 23 chr17 6817398 6817422 -82687131 + AT_rich Low_complexity Low_complexity 18 42 0 550 205 17 8 chr17 6817437 6817554 -82686999 - MER5A DNA MER1_type -63 126 9 2090 131 3 31 chr17 6817941 6818262 -82686291 - AluSx SINE Alu 0 312 1 213 39 0 0 chr17 6818769 6818795 -82685758 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 298 177 56 chr17 6819308 6819523 -82685030 + L2 LINE L2 3029 3269 -3 267 247 26 26 chr17 6819880 6819957 -82684596 + MIR SINE MIR 56 132 -130 1501 195 35 57 chr17 6821206 6821575 -82682978 - MLT1A2 LTR MaLR 0 374 14 218 360 45 0 chr17 6821743 6821854 -82682699 - L2 LINE L2 -2 3270 3155 307 319 18 26 chr17 6822083 6822196 -82682357 + MIR SINE MIR 37 148 -114 255 257 140 27 chr17 6826283 6826422 -82678131 + MIR SINE MIR 5 153 -55 657 329 40 40 chr17 6826514 6826943 -82677610 + MLT1K LTR MaLR 138 566 -22 198 286 71 14 chr17 6827217 6827287 -82677266 - MIR SINE MIR -70 192 119 685 59 29 0 chr17 6827530 6827632 -82676921 + (TTTC)n Simple_repeat Simple_repeat 3 107 0 839 145 0 0 chr17 6827632 6827749 -82676804 - FLAM_C SINE Alu -26 117 1 434 310 103 17 chr17 6827755 6827797 -82676756 - MIR SINE MIR -56 206 169 1266 242 102 50 chr17 6827797 6828277 -82676276 + MLT1D LTR MaLR 1 505 0 434 310 103 17 chr17 6828277 6828408 -82676145 - MIR SINE MIR -93 169 18 734 283 5 50 chr17 6828440 6828659 -82675894 + MIR SINE MIR 33 241 -21 888 216 64 5 chr17 6828752 6828956 -82675597 - MER20 DNA MER1_type 0 219 4 349 340 31 13 chr17 6829187 6829211 -82675342 + MIR SINE MIR 100 122 -140 6840 60 33 1 chr17 6829211 6830137 -82674416 + L1PA8 LINE L1 5218 6171 -1 349 340 31 13 chr17 6830137 6830271 -82674282 + MIR SINE MIR 122 261 -1 324 250 9 56 chr17 6830745 6830853 -82673700 + MIR SINE MIR 20 122 -86 4780 58 15 5 chr17 6831227 6831835 -82672718 - L1PA7 LINE L1 -1 6153 5540 367 319 26 0 chr17 6831883 6831990 -82672563 - MIR SINE MIR -77 185 76 271 227 0 113 chr17 6831990 6832087 -82672466 + MER91B DNA MER1_type 1 86 -104 1811 203 43 57 chr17 6832569 6833076 -82671477 - MLT1D LTR MaLR -3 502 3 1952 130 3 7 chr17 6833791 6834075 -82670478 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr17 6834078 6834105 -82670448 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 262 294 17 84 chr17 6835420 6835539 -82669014 + MIR SINE MIR 46 156 -106 185 339 0 0 chr17 6836130 6836195 -82668358 + MIR SINE MIR 11 75 -187 23 0 0 0 chr17 6836299 6836322 -82668231 + AT_rich Low_complexity Low_complexity 1 23 0 355 231 0 13 chr17 6836337 6836415 -82668138 + MIR3 SINE MIR 115 191 -17 2069 126 3 10 chr17 6836581 6836882 -82667671 + AluSx SINE Alu 1 299 -13 333 210 6 160 chr17 6838197 6838378 -82666175 + HAL1b LINE L1 1185 1337 -11 516 252 10 57 chr17 6839361 6839552 -82665001 - MIR SINE MIR -6 256 73 287 272 0 43 chr17 6839792 6839884 -82664669 - MLT1H LTR MaLR -415 134 47 191 299 72 31 chr17 6840588 6840685 -82663868 + MIR3 SINE MIR 105 205 -3 338 264 223 34 chr17 6841038 6841103 -82663450 + MER5A DNA MER1_type 13 64 -125 2099 121 10 20 chr17 6841103 6841408 -82663145 + AluSx SINE Alu 1 302 -10 338 264 223 34 chr17 6841408 6841490 -82663063 + MER5A DNA MER1_type 64 188 -1 616 269 106 56 chr17 6841493 6841691 -82662862 + LTR16C LTR ERVL 2 189 -302 2252 201 82 46 chr17 6841691 6842254 -82662299 - MER119 DNA MER1_type 0 583 1 616 269 106 56 chr17 6842254 6842519 -82662034 + LTR16C LTR ERVL 189 488 -3 212 291 103 0 chr17 6842547 6842664 -82661889 - L2 LINE L2 -673 2641 2513 254 324 67 9 chr17 6843276 6843381 -82661172 - MIR SINE MIR -70 192 82 * 289 283 204 16 chr17 6843365 6843488 -82661065 - L2 LINE L2 -4 3309 3210 1690 111 134 0 chr17 6843488 6843750 -82660803 + AluY SINE Alu 1 297 -4 289 283 204 16 chr17 6843750 6843817 -82660736 - L2 LINE L2 -103 3210 3083 1756 244 42 33 chr17 6845225 6845747 -82658806 - MER74B LTR ERVL -58 564 35 2738 84 5 22 chr17 6845747 6846117 -82658436 - THE1B LTR MaLR 0 364 1 1756 244 42 33 chr17 6846117 6846144 -82658409 - MER74B LTR ERVL -587 35 10 484 314 73 16 chr17 6846148 6846393 -82658160 + L2 LINE L2 2867 3125 -188 441 299 208 28 chr17 6846583 6847266 -82657287 + L2 LINE L2 2172 2977 -337 215 61 30 0 chr17 6848012 6848045 -82656508 + (TC)n Simple_repeat Simple_repeat 2 35 0 384 303 35 14 chr17 6848597 6848739 -82655814 - L3 LINE CR1 -86 1491 1347 581 296 38 32 chr17 6848884 6849070 -82655483 - MIR SINE MIR -3 259 73 219 354 53 18 chr17 6849242 6849355 -82655198 + L2 LINE L2 3122 3238 -34 327 317 57 16 chr17 6849519 6849642 -82654911 + MIR3 SINE MIR 6 133 -75 387 233 25 42 chr17 6850102 6850222 -82654331 + L2 LINE L2 1371 1488 -1826 204 282 39 39 chr17 6850576 6850654 -82653899 - MIR SINE MIR -103 105 28 690 263 59 0 chr17 6850943 6851129 -82653424 + MLT1F LTR MaLR 9 205 -337 644 113 0 120 chr17 6851129 6851262 -82653291 - SVA Other Other -406 980 864 263 250 0 36 chr17 6851270 6851354 -82653199 + MLT1F LTR MaLR 216 296 -246 1190 209 25 53 chr17 6851354 6851425 -82653128 - MLT1A1 LTR MaLR 0 365 294 1458 180 3 25 chr17 6851425 6851741 -82652812 + AluSq SINE Alu 2 310 -3 1190 209 25 53 chr17 6851741 6851990 -82652563 - MLT1A1 LTR MaLR -71 294 54 818 166 140 47 chr17 6852204 6852439 -82652114 + MLT1F LTR MaLR 286 542 0 212 253 0 27 chr17 6853512 6853587 -82650966 + L2 LINE L2 3015 3087 -185 250 216 57 45 chr17 6854118 6854206 -82650347 + L3 LINE CR1 575 663 -914 509 303 88 43 chr17 6855437 6855481 -82649072 - L1ME4a LINE L1 -233 5888 5847 2245 102 3 10 chr17 6855481 6855784 -82648769 + AluY SINE Alu 1 301 -10 509 303 88 43 chr17 6855784 6856205 -82648348 - L1ME4a LINE L1 -274 5847 5402 1205 187 20 24 chr17 6856289 6856535 -82648018 - L1PB4 LINE L1 -2 6154 5910 417 182 11 0 chr17 6856535 6856623 -82647930 + L1PB4 LINE L1 5762 5850 -306 2323 113 0 0 chr17 6856644 6856953 -82647600 - AluSg SINE Alu -1 309 1 3692 152 7 8 chr17 6857013 6857627 -82646926 - L1PA16 LINE L1 0 6166 5554 504 200 0 23 chr17 6857629 6857759 -82646794 + L1 LINE L1 3209 3335 -2811 5744 170 20 44 chr17 6857869 6859344 -82645209 + L1P4 LINE L1 3994 5429 -737 1603 141 0 72 chr17 6859344 6859667 -82644886 + AluSx SINE Alu 31 312 0 5744 170 20 44 chr17 6859667 6859729 -82644824 + L1P4 LINE L1 5429 5491 -675 320 267 14 62 chr17 6860279 6860425 -82644128 - LTR33 LTR ERVL -28 493 355 1406 213 92 77 chr17 6860425 6860903 -82643650 + MLT1E LTR MaLR 1 485 -108 210 108 0 54 chr17 6860917 6860932 -82643621 + (GAAAA)n Simple_repeat Simple_repeat 2 16 -20 2008 113 0 31 chr17 6860932 6861252 -82643301 + AluSg SINE Alu 1 310 0 210 108 0 54 chr17 6861252 6861273 -82643280 + (GAAAA)n Simple_repeat Simple_repeat 16 36 0 1452 185 122 24 chr17 6861771 6862100 -82642453 + MLT1A1 LTR MaLR 5 365 0 211 261 89 19 chr17 6862227 6862332 -82642221 - MIR3 SINE MIR -38 170 56 198 71 0 0 chr17 6862645 6862673 -82641880 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 380 274 82 30 chr17 6863282 6863417 -82641136 + MIR3 SINE MIR 67 208 0 2048 156 0 13 chr17 6863431 6863739 -82640814 + AluJb SINE Alu 1 304 -8 2359 79 0 0 chr17 6863816 6864120 -82640433 - AluY SINE Alu -7 304 1 26 64 0 0 chr17 6864300 6864347 -82640206 + AT_rich Low_complexity Low_complexity 1 47 0 464 290 121 22 chr17 6864727 6864958 -82639595 + MIR SINE MIR 5 258 -4 402 57 0 0 chr17 6864995 6865048 -82639505 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 220 344 32 43 chr17 6865052 6865145 -82639408 - L2 LINE L2 -16 3297 3206 333 247 26 0 chr17 6865505 6865582 -82638971 + MIR SINE MIR 163 241 -21 2389 98 0 0 chr17 6866027 6866322 -82638231 + AluSg SINE Alu 1 295 -15 185 323 141 10 chr17 6867367 6867466 -82637087 + MIR SINE MIR 36 147 -61 808 171 0 0 chr17 6867470 6867587 -82636966 + FLAM_C SINE Alu 1 117 -26 712 57 29 0 chr17 6867587 6867692 -82636861 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 792 272 62 49 chr17 6867942 6868310 -82636243 + MLT1H LTR MaLR 29 401 -148 486 228 0 0 chr17 6869005 6869163 -82635390 + (ATG)n Simple_repeat Simple_repeat 1 158 0 252 100 0 0 chr17 6869171 6869211 -82635342 + (ATGGTG)n Simple_repeat Simple_repeat 1 40 0 411 367 82 46 chr17 6869307 6869699 -82634854 + L2 LINE L2 2866 3271 -1 222 37 0 0 chr17 6870306 6870333 -82634220 + (CA)n Simple_repeat Simple_repeat 2 28 0 517 292 56 34 chr17 6870742 6870920 -82633633 - MIR SINE MIR -12 250 69 664 288 50 42 chr17 6871508 6872005 -82632548 - L1M4 LINE L1 -2930 3216 2716 328 283 20 30 chr17 6872107 6872206 -82632347 - L1M4 LINE L1 -3600 2546 2449 3259 133 8 10 chr17 6872277 6872789 -82631764 + Tigger3b DNA MER2_type 1 511 -720 495 285 18 18 chr17 6872903 6873068 -82631485 + MER90 LTR ERV1 445 609 -5 209 269 0 0 chr17 6873890 6873942 -82630611 + (CA)n Simple_repeat Simple_repeat 2 53 0 340 236 73 41 chr17 6874197 6874320 -82630233 + L2 LINE L2 2964 3090 -182 947 258 70 54 chr17 6874379 6874806 -82629747 - MLT1J LTR MaLR -8 503 70 2075 118 17 10 chr17 6874817 6875113 -82629440 + AluSq SINE Alu 1 298 -15 376 194 0 58 chr17 6875506 6875609 -82628944 + LTR67 LTR ERVL 458 554 -3 698 151 8 0 chr17 6875669 6875788 -82628765 - L1MA4 LINE L1 -6 6294 6175 1905 134 0 7 chr17 6876146 6876465 -82628088 + AluSc SINE Alu 1 317 0 2646 211 25 13 chr17 6877301 6877330 -82627223 + MER68 LTR ERV1 1 28 -534 1803 135 4 4 chr17 6877330 6877632 -82626921 - AluSq SINE Alu 0 319 18 2646 211 25 13 chr17 6877632 6878156 -82626397 + MER68 LTR ERV1 28 562 0 605 167 0 0 chr17 6878693 6878795 -82625758 + U6 snRNA snRNA 1 102 -5 2472 62 0 0 chr17 6878795 6879087 -82625466 - AluY SINE Alu -19 292 1 458 150 40 30 chr17 6879105 6879205 -82625348 + L1MA6 LINE L1 6200 6300 0 386 252 84 15 chr17 6879303 6879434 -82625119 - MIR SINE MIR -115 147 8 2152 127 17 0 chr17 6879995 6880295 -82624258 + AluSg SINE Alu 1 305 -5 375 23 0 0 chr17 6880312 6880356 -82624197 + (GGA)n Simple_repeat Simple_repeat 1 44 0 609 310 56 19 chr17 6880716 6880984 -82623569 - L1ME1 LINE L1 -4 6162 5885 187 220 51 51 chr17 6881387 6881446 -82623107 - L2 LINE L2 -54 3218 3160 768 186 11 57 chr17 6881895 6882072 -82622481 - MER5B DNA MER1_type -9 169 1 559 316 36 0 chr17 6883227 6883395 -82621158 + MIR SINE MIR 89 262 0 406 334 37 62 chr17 6883455 6883793 -82620760 - L1MEc LINE L1 -3787 2428 2140 25 0 0 0 chr17 6884586 6884611 -82619942 + AT_rich Low_complexity Low_complexity 1 25 0 2319 97 20 0 chr17 6884861 6885160 -82619393 - AluSg SINE Alu -5 305 1 306 281 238 5 chr17 6885527 6885712 -82618841 + L3 LINE CR1 1261 1488 -89 2049 145 0 3 chr17 6886256 6886559 -82617994 - AluSc SINE Alu -7 302 1 2325 110 7 0 chr17 6887901 6888211 -82616342 + AluSx SINE Alu 1 312 0 1799 106 0 8 chr17 6888403 6888639 -82615914 - AluSg SINE Alu -16 294 61 225 250 0 36 chr17 6888678 6888762 -82615791 + (TA)n Simple_repeat Simple_repeat 1 81 0 369 335 56 63 chr17 6889041 6889328 -82615225 - L1 LINE L1 -853 5293 5009 935 315 195 25 chr17 6889366 6890059 -82614494 + L2 LINE L2 2149 2959 -355 441 109 0 0 chr17 6890084 6890148 -82614405 - AluSp/q SINE Alu -13 300 237 983 106 15 0 chr17 6890344 6890476 -82614077 + AluY SINE Alu 1 134 -177 2282 92 7 3 chr17 6890476 6890770 -82613783 + AluSc SINE Alu 1 295 -14 2433 101 0 0 chr17 6891124 6891431 -82613122 + AluSq SINE Alu 1 307 -6 4213 276 90 25 chr17 6891438 6893613 -82610940 + L1 LINE L1 2663 4977 -1169 997 181 24 52 chr17 6893615 6893825 -82610728 + MLT1A2 LTR MaLR 11 214 -160 624 220 0 8 chr17 6893841 6893973 -82610580 + L1MD2 LINE L1 722 852 -5557 * 882 69 0 0 chr17 6893967 6894083 -82610470 - L1PA5 LINE L1 -167 5987 5872 1279 55 0 0 chr17 6894083 6894242 -82610311 + L1PA5 LINE L1 5992 6154 0 261 0 0 0 chr17 6894248 6894277 -82610276 + (TA)n Simple_repeat Simple_repeat 1 29 0 1443 202 15 3 chr17 6894277 6894599 -82609954 + L1MD2 LINE L1 841 1166 -5243 1188 195 106 44 chr17 6894644 6894829 -82609724 + L1MD2 LINE L1 3100 3272 -3134 2416 89 7 0 chr17 6894829 6895133 -82609420 + AluSc SINE Alu 1 306 -3 1188 195 106 44 chr17 6895133 6895382 -82609171 + L1MD2 LINE L1 3272 3561 -2845 725 147 66 22 chr17 6895384 6895520 -82609033 + FLAM_C SINE Alu 2 143 0 2011 246 37 26 chr17 6895520 6895681 -82608872 + L1MD2 LINE L1 3953 4111 -2295 1797 167 43 7 chr17 6895681 6895981 -82608572 + AluJb SINE Alu 1 311 -1 2011 246 37 26 chr17 6895981 6896468 -82608085 + L1MD2 LINE L1 4111 4608 -1798 958 54 0 0 chr17 6896468 6896580 -82607973 + AluSg/x SINE Alu 187 298 -12 7828 50 10 12 chr17 6896617 6898083 -82606470 + SVA Other Other 3 1386 0 25 0 0 0 chr17 6898116 6898141 -82606412 + AT_rich Low_complexity Low_complexity 1 25 0 448 245 99 52 chr17 6898335 6898678 -82605875 + L1MC5 LINE L1 7389 7747 -214 2829 215 35 49 chr17 6898692 6899053 -82605500 + L1MD2 LINE L1 4602 4966 -1653 1975 98 77 21 chr17 6899053 6899339 -82605214 + AluY SINE Alu 1 302 -9 2829 215 35 49 chr17 6899339 6899620 -82604933 + L1MD2 LINE L1 4966 5249 -1370 2501 75 3 0 chr17 6899620 6899925 -82604628 - AluSp SINE Alu -7 306 1 2829 215 35 49 chr17 6899925 6900774 -82603779 + L1MD2 LINE L1 5249 6079 -540 1203 146 0 0 chr17 6900779 6900950 -82603603 + AluSg/x SINE Alu 129 299 -11 749 128 96 8 chr17 6900960 6901085 -82603468 + FLAM_C SINE Alu 8 143 0 2221 121 0 34 chr17 6901085 6901408 -82603145 + AluSx SINE Alu 1 312 0 1685 235 23 11 chr17 6901413 6901855 -82602698 + L1MD2 LINE L1 6084 6530 -89 401 138 25 0 chr17 6901908 6901988 -82602565 + L1MD2 LINE L1 6537 6618 -1 2111 142 0 13 chr17 6901998 6902300 -82602253 + AluSq SINE Alu 1 298 -15 234 258 16 0 chr17 6902344 6902406 -82602147 + (TGAA)n Simple_repeat Simple_repeat 3 65 0 1228 139 0 0 chr17 6902428 6902594 -82601959 + AluJo SINE Alu 1 166 -146 205 271 0 0 chr17 6903086 6903134 -82601419 + MIR SINE MIR 194 241 -21 341 245 0 60 chr17 6904379 6904683 -82599870 + (CA)n Simple_repeat Simple_repeat 1 285 0 288 0 0 0 chr17 6904699 6904731 -82599822 + (CA)n Simple_repeat Simple_repeat 2 33 0 1872 173 10 0 chr17 6905422 6905728 -82598825 - AluJb SINE Alu -3 309 1 1888 104 4 0 chr17 6906085 6906326 -82598227 + AluSx SINE Alu 27 268 -44 404 339 93 32 chr17 6906468 6906608 -82597945 - L1MC/D LINE L1 -747 5399 5269 1423 25 0 0 chr17 6906608 6906771 -82597782 + L1PA5 LINE L1 5987 6149 -5 404 339 93 32 chr17 6906771 6907178 -82597375 - L1MC/D LINE L1 -877 5269 4890 2545 51 0 3 chr17 6907437 6907733 -82596820 + AluY SINE Alu 1 295 -16 349 315 195 15 chr17 6907746 6908013 -82596540 - L1MC/D LINE L1 -1722 4424 4110 2069 133 6 38 chr17 6908067 6908382 -82596171 - AluSq SINE Alu -8 305 1 228 244 0 0 chr17 6908666 6908707 -82595846 - MIR SINE MIR -132 76 36 954 9 0 0 chr17 6908956 6909064 -82595489 + AluY SINE Alu 203 310 -1 449 283 45 71 chr17 6909571 6909734 -82594819 - MIR SINE MIR -69 193 34 2334 98 0 0 chr17 6909734 6910029 -82594524 - AluSx SINE Alu -17 295 1 449 283 45 71 chr17 6910029 6910063 -82594490 - MIR SINE MIR -228 34 1 2398 70 10 3 chr17 6910661 6910962 -82593591 - AluSq SINE Alu -10 303 1 396 297 27 27 chr17 6910973 6911158 -82593395 + L2 LINE L2 1705 1889 -1425 850 248 71 40 chr17 6911160 6911511 -82593042 + MER92A LTR ERV1 1 362 -50 570 297 221 26 chr17 6911526 6912636 -82591917 + L2 LINE L2 1888 3218 -95 381 93 0 0 chr17 6912666 6912720 -82591833 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 295 294 117 22 chr17 6913817 6913997 -82590556 + LTR16A1 LTR ERVL 168 364 -93 268 356 11 0 chr17 6914830 6914917 -82589636 + L2 LINE L2 3121 3208 -64 410 304 31 58 chr17 6915259 6915450 -82589103 - MIR3 SINE MIR -20 188 3 303 258 0 0 chr17 6916034 6916100 -82588453 + MIR SINE MIR 78 143 -65 744 248 18 91 chr17 6916558 6916832 -82587721 - MIR SINE MIR 0 262 9 2340 88 7 0 chr17 6917089 6917383 -82587170 - AluSg SINE Alu -10 300 5 769 199 30 6 chr17 6918178 6918344 -82586209 - MLT1B LTR MaLR 0 467 298 * 798 166 0 45 chr17 6918325 6918482 -82586071 - MLT1B LTR MaLR -207 183 34 513 182 0 0 chr17 6918494 6918593 -82585960 + (CA)n Simple_repeat Simple_repeat 2 100 0 396 343 69 23 chr17 6918939 6919114 -82585439 - L2 LINE L2 -1 3271 3089 938 217 4 71 chr17 6919177 6919417 -82585136 + MER58A DNA MER1_type 1 224 0 322 349 71 0 chr17 6919530 6919656 -82584897 + MIR3 SINE MIR 49 183 -25 2179 136 0 0 chr17 6920055 6920364 -82584189 + AluSx SINE Alu 4 312 0 391 235 105 45 chr17 6920391 6920616 -82583937 + MIR SINE MIR 19 260 -2 412 266 49 21 chr17 6920668 6920811 -82583742 - MIR3 SINE MIR -58 150 4 211 289 96 0 chr17 6920821 6920904 -82583649 + L2 LINE L2 3182 3272 0 231 103 0 0 chr17 6921274 6921313 -82583240 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1901 122 0 0 chr17 6921314 6921568 -82582985 - AluSc SINE Alu -55 254 1 364 391 39 6 chr17 6922047 6922226 -82582327 + HAL1 LINE L1 1613 1797 -710 1987 118 0 77 chr17 6922510 6922833 -82581720 + AluSx SINE Alu 3 300 -12 402 296 68 46 chr17 6922851 6922901 -82581652 + L1ME LINE L1 5267 5314 -807 2346 98 0 3 chr17 6922901 6923198 -82581355 + AluSx SINE Alu 1 296 -16 2478 65 7 3 chr17 6923200 6923507 -82581046 + AluY SINE Alu 1 308 -3 402 296 68 46 chr17 6923507 6923786 -82580767 + L1ME LINE L1 5314 5603 -518 3907 128 32 8 chr17 6924076 6924691 -82579862 + L1PA16 LINE L1 5533 6162 -4 760 274 91 11 chr17 6924850 6925223 -82579330 + LTR33A LTR ERVL 121 523 0 349 292 289 0 chr17 6925223 6925535 -82579018 - L2 LINE L2 -517 2797 2396 252 0 0 0 chr17 6925540 6925568 -82578985 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 1771 118 4 4 chr17 6925614 6925859 -82578694 - AluSq SINE Alu -11 302 58 309 318 20 47 chr17 6926717 6926865 -82577688 + MIR SINE MIR 63 206 -56 2328 96 23 0 chr17 6927587 6927890 -82576663 + AluSg SINE Alu 1 310 0 221 283 283 26 chr17 6928002 6928193 -82576360 - MIR SINE MIR -1 261 22 306 0 0 0 chr17 6928931 6928965 -82575588 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 143 0 0 chr17 6928966 6929001 -82575552 + (GA)n Simple_repeat Simple_repeat 2 36 0 308 253 76 0 chr17 6929040 6929119 -82575434 + L2 LINE L2 3152 3236 -36 407 257 53 9 chr17 6929197 6929310 -82575243 + L2 LINE L2 3188 3305 -8 277 320 155 39 chr17 6929365 6929705 -82574848 + L3 LINE CR1 1116 1508 -69 1050 154 64 86 chr17 6929705 6929850 -82574703 + MER30 DNA MER1_type 2 142 -88 2267 90 0 23 chr17 6929850 6930150 -82574403 + AluSg SINE Alu 1 293 -17 1050 154 64 86 chr17 6930150 6930237 -82574316 + MER30 DNA MER1_type 142 229 -1 277 320 155 39 chr17 6930237 6930284 -82574269 + L3 LINE CR1 1508 1548 -29 2338 96 0 0 chr17 6930731 6931023 -82573530 + AluSg SINE Alu 1 292 -18 593 279 11 34 chr17 6931221 6931400 -82573153 + MIR SINE MIR 29 203 -59 1173 282 95 36 chr17 6931974 6932502 -82572051 + L2 LINE L2 2222 2780 -534 1846 42 0 30 chr17 6932865 6933102 -82571451 + L1PA5 LINE L1 5925 6154 0 208 299 72 0 chr17 6933110 6933207 -82571346 + L2 LINE L2 2766 2869 -445 578 175 0 10 chr17 6933888 6933991 -82570562 + MLT1C LTR MaLR 1 102 -365 2239 88 0 7 chr17 6933992 6934275 -82570278 - AluSc SINE Alu -8 301 21 254 200 0 0 chr17 6934277 6934332 -82570221 - L1MC4 LINE L1 -540 7502 7448 1844 165 8 58 chr17 6934348 6934741 -82569812 + MLT1C LTR MaLR 95 467 0 2469 245 120 20 chr17 6934741 6935912 -82568641 + L1MC4 LINE L1 6482 7713 -95 331 269 0 119 chr17 6935999 6936053 -82568500 - MER5A DNA MER1_type -63 126 96 2376 116 0 0 chr17 6936053 6936363 -82568190 + AluSx SINE Alu 1 310 -2 331 269 0 119 chr17 6936363 6936442 -82568111 - MER5A DNA MER1_type -93 96 9 450 275 76 18 chr17 6936456 6936627 -82567926 + L2 LINE L2 2880 3060 -253 2122 190 47 19 chr17 6936687 6937156 -82567397 - MLT1D LTR MaLR -2 503 22 277 257 67 12 chr17 6937258 6937383 -82567170 + MIR SINE MIR 60 191 -65 184 379 29 19 chr17 6938216 6938319 -82566234 - L2 LINE L2 -19 3294 3191 859 72 7 7 chr17 6938522 6938660 -82565893 + (CA)n Simple_repeat Simple_repeat 2 139 0 3518 148 2 29 chr17 6938673 6938724 -82565829 - L1PA15 LINE L1 0 6165 6114 275 0 0 28 chr17 6938724 6938760 -82565793 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1987 83 0 0 chr17 6938760 6939000 -82565553 - AluSg SINE Alu -31 279 40 3518 148 2 29 chr17 6939000 6939537 -82565016 - L1PA15 LINE L1 -49 6116 5592 2230 101 14 0 chr17 6939685 6939973 -82564580 - AluSc SINE Alu -17 292 1 327 312 71 51 chr17 6940868 6941020 -82563533 + L2 LINE L2 2812 2972 -300 420 20 0 0 chr17 6941020 6941069 -82563484 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 312 71 51 chr17 6941069 6941169 -82563384 + L2 LINE L2 2972 3069 -203 2381 116 0 0 chr17 6941810 6942120 -82562433 + AluSg SINE Alu 1 310 0 2092 104 50 0 chr17 6942650 6942929 -82561624 - AluSq SINE Alu -6 307 15 190 226 0 94 chr17 6943721 6943774 -82560779 - L2 LINE L2 -86 3227 3180 3078 103 53 0 chr17 6943783 6944218 -82560335 + LTR22A LTR ERVK 1 458 0 305 302 133 46 chr17 6944560 6944724 -82559829 + MIR SINE MIR 31 211 -51 1011 191 3 6 chr17 6945306 6945619 -82558934 + (CAT)n Simple_repeat Simple_repeat 2 313 0 541 315 24 33 chr17 6945621 6945834 -82558719 - MIR SINE MIR -1 261 51 2162 108 24 0 chr17 6946093 6946380 -82558173 + AluSg SINE Alu 1 294 -16 365 297 18 0 chr17 6946716 6946827 -82557726 + MIR3 SINE MIR 82 194 -14 2117 125 0 0 chr17 6947242 6947585 -82556968 + AluSg SINE Alu 1 343 0 297 257 28 55 chr17 6947739 6947848 -82556705 + MIR SINE MIR 74 179 -83 596 299 17 17 chr17 6948029 6948203 -82556350 + MIR SINE MIR 41 214 -48 2322 93 14 0 chr17 6948973 6949264 -82555289 - AluSx SINE Alu -17 295 1 627 284 65 20 chr17 6949685 6950040 -82554513 - L1ME3 LINE L1 -277 5885 5515 426 254 27 9 chr17 6950046 6950156 -82554397 - MIR SINE MIR -61 147 36 2139 119 3 7 chr17 6951047 6951357 -82553196 - AluSc SINE Alu 0 309 1 233 361 25 25 chr17 6951358 6951405 -82553148 + L2 LINE L2 3149 3195 -77 253 231 31 0 chr17 6951405 6951470 -82553083 + MIR SINE MIR 193 259 -3 446 299 148 31 chr17 6951855 6952055 -82552498 - MLT1I LTR MaLR 0 409 163 2657 194 56 6 chr17 6952055 6952595 -82551958 + MLT1F1 LTR MaLR 1 567 0 446 299 148 31 chr17 6952595 6952685 -82551868 - MLT1I LTR MaLR -246 163 85 187 283 0 19 chr17 6952825 6952878 -82551675 + L2 LINE L2 2701 2752 -562 187 307 202 23 chr17 6952890 6953108 -82551445 + L2 LINE L2 3016 3272 0 324 161 0 0 chr17 6953111 6953173 -82551380 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 259 282 94 8 chr17 6954083 6954102 -82550451 - MIR SINE MIR -71 191 175 2252 101 0 28 chr17 6954102 6954383 -82550170 + AluY SINE Alu 1 274 -37 218 0 95 0 chr17 6954383 6954425 -82550128 + A-rich Low_complexity Low_complexity 1 46 0 2252 101 0 28 chr17 6954425 6954461 -82550092 + AluY SINE Alu 274 309 -2 259 282 94 8 chr17 6954461 6954558 -82549995 - MIR SINE MIR -87 175 65 482 285 26 65 chr17 6954565 6954781 -82549772 - MIR3 SINE MIR -51 211 3 2724 93 132 5 chr17 6954943 6955374 -82549179 - LTR19A LTR ERV1 0 486 1 642 272 132 55 chr17 6956257 6956800 -82547753 - MLT1H LTR MaLR -3 552 1 611 261 64 80 chr17 6957905 6958154 -82546399 + MIR SINE MIR 2 246 -16 425 268 8 24 chr17 6958202 6958325 -82546228 - MIR SINE MIR -140 122 2 490 257 56 0 chr17 6958332 6958476 -82546077 + MIR SINE MIR 84 235 -27 732 260 28 0 chr17 6958495 6958676 -82545877 + MIR SINE MIR 63 248 -14 2373 89 7 3 chr17 6958738 6959040 -82545513 - AluSx SINE Alu -9 303 1 2324 117 0 3 chr17 6959430 6959737 -82544816 - AluSq SINE Alu -7 306 1 482 297 57 38 chr17 6960063 6960275 -82544278 - MIR SINE MIR 0 262 47 726 184 207 0 chr17 6960302 6960476 -82544077 + MIR SINE MIR 21 230 -32 679 144 18 0 chr17 6960602 6960713 -82543840 + MER5A DNA MER1_type 6 118 -71 1528 213 23 35 chr17 6960713 6960869 -82543684 + MLT1A1 LTR MaLR 1 157 -208 2467 84 0 0 chr17 6960869 6961166 -82543387 + AluSq SINE Alu 1 297 -16 1528 213 23 35 chr17 6961166 6961357 -82543196 + MLT1A1 LTR MaLR 157 344 -21 240 329 0 0 chr17 6961370 6961440 -82543113 + MER5A DNA MER1_type 120 189 0 407 357 55 6 chr17 6961456 6961638 -82542915 + MIR SINE MIR 22 212 -50 206 276 35 0 chr17 6962539 6962597 -82541956 - L3 LINE CR1 -127 1450 1391 625 206 103 7 chr17 6962601 6962747 -82541806 + MER45A DNA AcHobo 16 175 -3 752 267 6 0 chr17 6962880 6963045 -82541508 - MER96 DNA MER1_type? 0 175 10 316 217 0 0 chr17 6963257 6963317 -82541236 + MER5A DNA MER1_type 21 80 -109 2118 162 28 0 chr17 6963324 6963683 -82540870 - L1MB1 LINE L1 -356 5812 5444 351 209 0 0 chr17 6963678 6963745 -82540808 + L1MB1 LINE L1 5839 5905 -263 * 1241 143 10 0 chr17 6963746 6963955 -82540598 + MER2 DNA MER2_type 1 211 -134 225 137 20 20 chr17 6963956 6964007 -82540546 + (TATTG)n Simple_repeat Simple_repeat 3 53 0 1080 175 10 0 chr17 6964083 6964283 -82540270 + L1MB1 LINE L1 5905 6106 -62 1262 131 11 0 chr17 6964294 6964477 -82540076 + AluSg/x SINE Alu 120 304 -8 269 136 0 0 chr17 6964477 6964521 -82540032 + L1MB1 LINE L1 6124 6167 -1 340 221 0 63 chr17 6964540 6964635 -82539918 + MER5A DNA MER1_type 61 149 -40 4155 193 38 10 chr17 6964892 6966048 -82538505 + L1MB4 LINE L1 4944 6135 -45 2022 107 3 40 chr17 6966064 6966364 -82538189 + AluSp SINE Alu 1 289 -24 186 351 39 0 chr17 6966519 6966596 -82537957 - MIR3 SINE MIR -17 191 112 554 239 42 24 chr17 6966876 6967034 -82537519 + MIR3 SINE MIR 34 197 -54 25 0 0 0 chr17 6967034 6967059 -82537494 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr17 6967215 6967252 -82537301 + (TG)n Simple_repeat Simple_repeat 2 38 0 525 288 36 7 chr17 6967340 6967479 -82537074 - MIR SINE MIR -95 167 25 1212 117 0 103 chr17 6967687 6967900 -82536653 + AluSx SINE Alu 1 191 -121 347 85 0 0 chr17 6967904 6967951 -82536602 + AluSc SINE Alu 61 107 -192 1488 113 0 5 chr17 6968006 6968201 -82536352 + AluSg/x SINE Alu 108 301 -11 1529 257 36 5 chr17 6968447 6968859 -82535694 + LTR16A LTR ERVL 26 450 0 1059 238 141 35 chr17 6969597 6970050 -82534503 - MLT1D LTR MaLR -4 501 1 403 297 27 0 chr17 6970324 6970435 -82534118 - MER81 DNA DNA 0 114 1 1103 190 100 35 chr17 6970729 6970883 -82533670 - MLT1C LTR MaLR -2 465 323 2069 116 71 100 chr17 6970883 6971322 -82533231 + MSTA LTR MaLR 3 428 0 1103 190 100 35 chr17 6971322 6971457 -82533096 - MLT1C LTR MaLR -144 323 157 264 362 11 11 chr17 6971489 6971583 -82532970 + L2 LINE L2 3117 3210 -62 259 330 11 11 chr17 6971595 6971686 -82532867 - L3 LINE CR1 -97 1480 1390 705 272 80 34 chr17 6971943 6972267 -82532286 + L1MC4a LINE L1 5391 5729 -392 446 335 41 10 chr17 6972281 6972475 -82532078 + L1MC4a LINE L1 5793 5992 -1816 317 291 75 22 chr17 6973381 6973515 -82531038 + HAL1b LINE L1 1201 1341 -7 405 299 37 43 chr17 6973601 6973788 -82530765 - MIR3 SINE MIR -3 205 20 225 0 0 0 chr17 6975481 6975506 -82529047 + (CA)n Simple_repeat Simple_repeat 1 25 0 360 106 0 15 chr17 6975635 6975676 -82528877 - MLT2D LTR ERVL 0 520 479 405 0 0 0 chr17 6975676 6975721 -82528832 + (TG)n Simple_repeat Simple_repeat 2 46 0 360 106 0 15 chr17 6975721 6975745 -82528808 - MLT2D LTR ERVL -41 479 456 198 240 0 0 chr17 6975760 6975810 -82528743 + (TA)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr17 6975810 6975833 -82528720 + (GA)n Simple_repeat Simple_repeat 2 24 0 1043 185 35 142 chr17 6975839 6976234 -82528319 - MLT2D LTR ERVL -61 353 1 255 227 91 0 chr17 6976311 6976377 -82528176 - MIR SINE MIR -74 188 117 622 289 28 28 chr17 6976404 6976615 -82527938 + MIR SINE MIR 52 262 0 2332 171 76 78 chr17 6977835 6978390 -82526163 + MLT2B3 LTR ERVL 1 554 0 449 263 23 8 chr17 6979112 6979245 -82525308 - LTR16C LTR ERVL 0 491 357 216 191 0 0 chr17 6979346 6979393 -82525160 + T-rich Low_complexity Low_complexity 1 47 0 2396 82 10 3 chr17 6979396 6979699 -82524854 - AluSc SINE Alu -4 305 1 315 276 86 65 chr17 6979701 6979933 -82524620 - LTR16C LTR ERVL -253 238 2 522 358 39 25 chr17 6980043 6980322 -82524231 - L3 LINE CR1 -2 1575 1293 2013 188 86 0 chr17 6980409 6980851 -82523702 + MLT1D LTR MaLR 26 505 0 717 320 114 53 chr17 6980896 6981389 -82523164 - L3 LINE CR1 -354 1223 701 341 267 11 33 chr17 6982022 6982112 -82522441 - L3 LINE CR1 -903 674 587 2543 181 52 81 chr17 6982229 6982582 -82521971 + L1MB5 LINE L1 5258 5312 -862 1669 193 0 3 chr17 6982582 6982882 -82521671 + AluJo SINE Alu 1 299 -13 2543 181 52 81 chr17 6982882 6983389 -82521164 + L1MB5 LINE L1 5312 5832 -342 235 262 82 0 chr17 6983534 6983595 -82520958 + L3 LINE CR1 609 674 -903 597 193 0 17 chr17 6983632 6983751 -82520802 + L1MB5 LINE L1 6058 6174 0 1984 135 66 23 chr17 6983802 6984151 -82520402 - THE1B LTR MaLR 0 364 1 228 143 41 0 chr17 6984760 6984809 -82519744 + MER112 DNA MER1_type 106 156 -104 1945 130 33 0 chr17 6985160 6985460 -82519093 + AluSg SINE Alu 1 310 0 320 327 46 7 chr17 6985806 6986081 -82518472 + L1ME LINE L1 5373 5704 -417 433 268 41 8 chr17 6986145 6986268 -82518285 - MIR SINE MIR -51 211 85 430 182 0 0 chr17 6986350 6986416 -82518137 - L2 LINE L2 0 3272 3207 239 200 20 0 chr17 6986663 6986713 -82517840 - L2 LINE L2 0 3313 3263 1959 123 0 3 chr17 6986787 6987087 -82517466 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr17 6987202 6987225 -82517328 + AT_rich Low_complexity Low_complexity 1 23 0 324 75 15 30 chr17 6987564 6987631 -82516922 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2121 55 7 0 chr17 6987786 6988058 -82516495 - AluY SINE Alu -1 310 37 439 70 42 0 chr17 6988068 6988139 -82516414 + T-rich Low_complexity Low_complexity 3 76 0 1641 178 10 0 chr17 6988141 6988444 -82516109 - AluSg SINE Alu -4 306 1 278 314 32 8 chr17 6989188 6989312 -82515241 + HAL1 LINE L1 23 149 -2358 2060 103 3 3 chr17 6989326 6989618 -82514935 + AluSq SINE Alu 1 292 -21 1077 171 6 0 chr17 6989939 6990115 -82514438 - MLT1F1 LTR MaLR 0 567 391 585 267 48 0 chr17 6990085 6990231 -82514322 + MER58B DNA MER1_type 150 302 -39 * 714 210 8 0 chr17 6990238 6990362 -82514191 - MER58B DNA MER1_type -22 319 195 * 1539 196 149 9 chr17 6990351 6990687 -82513866 - MLT1F1 LTR MaLR -184 383 1 782 274 71 110 chr17 6990758 6991544 -82513009 + HAL1 LINE L1 745 1471 -1036 1238 204 14 5 chr17 6991544 6991765 -82512788 + MER58A DNA MER1_type 2 224 0 782 274 71 110 chr17 6991765 6992169 -82512384 + HAL1 LINE L1 1471 1889 -618 2100 116 7 7 chr17 6993036 6993339 -82511214 + AluSq SINE Alu 1 303 -10 1919 118 3 41 chr17 6993758 6994073 -82510480 - AluSx SINE Alu -9 303 1 483 203 15 68 chr17 6994519 6994652 -82509901 - MIR SINE MIR -115 147 22 264 273 0 30 chr17 6995733 6995838 -82508715 + (CACG)n Simple_repeat Simple_repeat 1 101 0 2065 118 17 0 chr17 6996557 6996853 -82507700 + AluSx SINE Alu 1 301 -11 264 301 110 43 chr17 6997199 6997408 -82507145 - L2 LINE L2 -526 2788 2566 387 211 0 0 chr17 6997568 6997658 -82506895 + (CA)n Simple_repeat Simple_repeat 1 90 0 621 257 0 0 chr17 6997705 6997884 -82506669 + (CA)n Simple_repeat Simple_repeat 1 179 0 223 223 202 32 chr17 6998058 6998152 -82506401 - MIR SINE MIR -82 126 17 181 256 0 0 chr17 6998166 6998209 -82506344 - MIR3 SINE MIR -26 182 140 341 248 87 52 chr17 6998608 6998763 -82505790 + MIR3 SINE MIR 35 192 -42 1970 104 3 10 chr17 6998888 6999200 -82505353 + AluY SINE Alu 3 312 0 748 254 174 40 chr17 6999204 6999601 -82504952 - MLT1J LTR MaLR -51 460 11 184 321 71 0 chr17 6999829 6999913 -82504640 - L2 LINE L2 -695 2619 2530 275 227 91 11 chr17 7001182 7001270 -82503283 + L2 LINE L2 2916 3010 -262 210 276 92 40 chr17 7001248 7001324 -82503229 + L2 LINE L2 2722 2801 -513 * 407 257 20 10 chr17 7001341 7001442 -82503111 + MER94 DNA DNA 19 120 -14 555 308 86 4 chr17 7001452 7001686 -82502867 + L2 LINE L2 2809 3061 -252 1032 285 98 21 chr17 7002156 7002535 -82502018 - MLT1K LTR MaLR -34 554 147 246 266 42 112 chr17 7002690 7002833 -82501720 + MIR SINE MIR 60 192 -70 317 287 144 35 chr17 7003789 7003963 -82500590 + MIR SINE MIR 18 210 -52 1875 141 7 0 chr17 7004173 7004470 -82500083 - AluSg SINE Alu 0 310 12 432 236 34 0 chr17 7004603 7004692 -82499861 + L1MC5 LINE L1 7810 7901 -60 211 379 15 0 chr17 7005053 7005119 -82499434 - MIR SINE MIR -108 100 34 467 216 28 102 chr17 7005251 7005427 -82499126 - MIR SINE MIR -1 261 99 300 264 55 11 chr17 7005530 7005621 -82498932 - L1ME LINE L1 -340 5781 5687 384 248 38 53 chr17 7005640 7005773 -82498780 + L2 LINE L2 3180 3310 -3 439 141 22 0 chr17 7005796 7005888 -82498665 + GA-rich Low_complexity Low_complexity 1 94 0 662 216 24 72 chr17 7006005 7006049 -82498504 - MER5B DNA MER1_type 0 178 133 2382 63 0 10 chr17 7006049 7006349 -82498204 - AluSg SINE Alu -13 297 1 662 216 24 72 chr17 7006349 7006471 -82498082 - MER5B DNA MER1_type -45 133 20 465 293 18 24 chr17 7006705 7006869 -82497684 + MER5A DNA MER1_type 26 188 -1 414 255 114 62 chr17 7007540 7007865 -82496688 - HAL1 LINE L1 -832 1675 1334 395 198 127 32 chr17 7007899 7008025 -82496528 - MIR SINE MIR -17 245 108 2108 124 0 7 chr17 7008762 7009068 -82495485 + AluSx SINE Alu 1 304 -8 1974 156 122 64 chr17 7009612 7010094 -82494459 + MLT2B1 LTR ERVL 3 512 -8 287 116 0 116 chr17 7010360 7010429 -82494124 + MLT1K LTR MaLR 182 242 -346 246 235 20 0 chr17 7010396 7010447 -82494106 + MLT1K LTR MaLR 141 192 -396 * 315 291 106 70 chr17 7011186 7011543 -82493010 + L2 LINE L2 2450 2819 -495 2402 69 0 0 chr17 7012579 7012882 -82491671 - AluY SINE Alu -8 303 1 193 294 0 0 chr17 7013398 7013449 -82491104 + L2 LINE L2 2487 2537 -777 2241 141 19 14 chr17 7013549 7013912 -82490641 - LTR45B LTR ERV1 -101 388 24 1824 147 7 3 chr17 7013912 7014205 -82490348 + AluSx SINE Alu 1 294 -18 889 237 163 50 chr17 7014247 7014419 -82490134 + L2 LINE L2 2536 2687 -626 2033 83 3 53 chr17 7014419 7014744 -82489809 + AluSp SINE Alu 1 310 0 889 237 163 50 chr17 7014744 7015169 -82489384 + L2 LINE L2 2687 3221 -92 316 260 10 0 chr17 7015241 7015341 -82489212 - L1MC4 LINE L1 -17 8025 7925 206 214 0 0 chr17 7015345 7015387 -82489166 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1926 141 3 10 chr17 7015410 7015722 -82488831 - AluSg SINE Alu 0 310 1 570 216 20 40 chr17 7015843 7016011 -82488542 - L1ME2 LINE L1 -5 6161 5997 463 259 0 28 chr17 7016012 7016120 -82488433 + L2 LINE L2 3209 3313 0 2138 121 0 0 chr17 7016565 7016863 -82487690 - AluSq SINE Alu -15 298 1 528 16 0 0 chr17 7017074 7017135 -82487418 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 327 144 26 chr17 7017504 7017657 -82486896 - L2 LINE L2 -1 3271 3101 242 321 47 0 chr17 7018229 7018335 -82486218 + L2 LINE L2 2550 2660 -654 333 0 0 0 chr17 7019348 7019385 -82485168 + (TG)n Simple_repeat Simple_repeat 2 38 0 2011 119 20 0 chr17 7020617 7020910 -82483643 - AluSx SINE Alu -13 299 1 1958 139 0 3 chr17 7020932 7021235 -82483318 - AluSx SINE Alu 0 312 11 1993 126 0 0 chr17 7021250 7021543 -82483010 - AluSx SINE Alu -11 301 9 1886 125 21 4 chr17 7021544 7021825 -82482728 - AluSx SINE Alu -26 286 1 629 304 65 42 chr17 7021866 7022221 -82482332 + L2 LINE L2 2910 3272 0 2306 81 0 0 chr17 7022222 7022520 -82482033 + AluY SINE Alu 1 298 -13 796 163 0 0 chr17 7022953 7023076 -82481477 - AluJo SINE Alu -22 290 168 785 135 0 0 chr17 7023078 7023189 -82481364 - AluJo SINE Alu -200 112 2 413 327 72 33 chr17 7024744 7025050 -82479503 + L1ME4a LINE L1 3459 3776 -2370 518 154 0 11 chr17 7025189 7025280 -82479273 + MLT1C LTR MaLR 1 90 -377 2169 113 3 0 chr17 7025298 7025607 -82478946 - AluSx SINE Alu -2 310 1 236 315 27 0 chr17 7025710 7025783 -82478770 + MER58 DNA MER1_type 2346 2420 0 2089 50 0 12 chr17 7025887 7026146 -82478407 + L1PA8 LINE L1 5913 6168 -4 389 321 137 50 chr17 7026617 7027090 -82477463 + L1ME4a LINE L1 4726 5253 -893 292 301 83 68 chr17 7027091 7027228 -82477325 + L1ME4a LINE L1 5255 5388 -733 2039 118 16 3 chr17 7027228 7027534 -82477019 + AluSg SINE Alu 1 310 0 292 301 83 68 chr17 7027534 7027722 -82476831 + L1ME4a LINE L1 5388 5585 -536 317 294 80 39 chr17 7028363 7028876 -82475677 + L1ME4a LINE L1 5588 6121 0 1011 278 84 28 chr17 7029740 7030118 -82474435 + L1MEd LINE L1 9 364 -5765 2040 120 0 13 chr17 7030118 7030434 -82474119 + AluSx SINE Alu 1 312 0 1011 278 84 28 chr17 7030434 7030902 -82473651 + L1MEd LINE L1 364 804 -5325 2151 104 0 7 chr17 7030902 7031199 -82473354 + AluSp SINE Alu 1 295 -18 1011 278 84 28 chr17 7031199 7031840 -82472713 + L1MEd LINE L1 804 1652 -4477 229 347 89 8 chr17 7032608 7032732 -82471821 - MLT1K LTR MaLR -23 565 432 250 214 36 0 chr17 7032847 7032903 -82471650 + MER53 DNA DNA 132 189 0 267 235 49 25 chr17 7032916 7032997 -82471556 - MLT1K LTR MaLR -342 246 164 2102 76 11 4 chr17 7033086 7033349 -82471204 + AluSg SINE Alu 34 298 -12 776 185 93 6 chr17 7033626 7033788 -82470765 - MER5B DNA MER1_type -2 176 1 1472 127 162 4 chr17 7033935 7034188 -82470365 + AluSx SINE Alu 1 293 -19 2422 61 0 38 chr17 7034206 7034519 -82470034 + AluY SINE Alu 5 305 -6 304 201 71 32 chr17 7034580 7034734 -82469819 + L1ME4a LINE L1 5962 6121 0 518 290 51 19 chr17 7035758 7035972 -82468581 + MIR SINE MIR 25 245 -17 329 280 106 15 chr17 7037201 7037333 -82467220 + MIR3 SINE MIR 56 199 -9 1886 235 74 6 chr17 7037937 7038559 -82465994 + L1MEd LINE L1 2577 3240 -2889 655 165 0 31 chr17 7038560 7038687 -82465866 + MLT1A1 LTR MaLR 197 319 -46 3991 236 59 47 chr17 7038690 7039462 -82465091 + L1MEd LINE L1 3235 3996 -2151 2511 70 0 0 chr17 7039462 7039760 -82464793 + AluY SINE Alu 1 298 -13 3991 236 59 47 chr17 7039760 7040136 -82464417 + L1MEd LINE L1 3996 4366 -1781 1869 161 0 24 chr17 7040136 7040427 -82464126 - AluJb SINE Alu -14 298 15 3991 236 59 47 chr17 7040427 7041467 -82463086 + L1MEd LINE L1 4366 5449 -698 327 222 56 0 chr17 7041644 7041716 -82462837 - HERVL LTR ERVL -848 4806 4731 606 236 25 6 chr17 7041842 7041999 -82462554 + L1MB7 LINE L1 6007 6166 -18 2215 129 3 0 chr17 7042342 7042653 -82461900 + AluSx SINE Alu 1 312 0 1004 120 0 0 chr17 7042671 7042804 -82461749 + AluSg SINE Alu 1 133 -177 2138 138 3 3 chr17 7042804 7043115 -82461438 + AluSx SINE Alu 1 311 -1 403 213 13 20 chr17 7043115 7043265 -82461288 + GA-rich Low_complexity Low_complexity 2 150 0 391 220 96 53 chr17 7043830 7043992 -82460561 + L1M4 LINE L1 5069 5243 -903 3961 4 0 0 chr17 7043992 7044450 -82460103 + L1PA2 LINE L1 5698 6155 0 391 220 96 53 chr17 7044450 7044496 -82460057 + L1M4 LINE L1 5243 5286 -860 220 27 54 0 chr17 7044550 7044587 -82459966 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 543 194 173 0 chr17 7044600 7044793 -82459760 + L1ME1 LINE L1 5218 5440 -722 1363 112 0 0 chr17 7044793 7044963 -82459590 + AluSq SINE Alu 1 170 -143 773 273 62 32 chr17 7044964 7045305 -82459248 + L1ME1 LINE L1 5810 6160 -6 610 206 18 42 chr17 7045339 7045504 -82459049 - MLT1J1 LTR MaLR -285 161 1 219 309 41 24 chr17 7046376 7046499 -82458054 - MIR3 SINE MIR -48 160 36 2275 72 3 52 chr17 7046523 7046850 -82457703 + AluSq SINE Alu 2 313 0 2307 121 0 0 chr17 7047009 7047315 -82457238 + AluSx SINE Alu 1 306 -6 1155 157 0 5 chr17 7047830 7048027 -82456526 - MLT1D LTR MaLR 0 505 310 566 208 66 85 chr17 7048066 7048278 -82456275 - MLT1D LTR MaLR -295 210 3 1347 49 5 16 chr17 7048522 7048706 -82455847 - L1PA7 LINE L1 -1 6153 5972 255 297 93 0 chr17 7049456 7049574 -82454979 - MIR3 SINE MIR -46 162 34 267 54 0 0 chr17 7050604 7050641 -82453912 + (CAGGG)n Simple_repeat Simple_repeat 2 38 0 192 97 0 0 chr17 7051115 7051146 -82453407 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 394 59 0 0 chr17 7051279 7051330 -82453223 - AluSp/q SINE Alu -27 276 226 2391 100 0 0 chr17 7052013 7052313 -82452240 + AluSg SINE Alu 1 300 -10 2381 98 3 9 chr17 7052382 7052697 -82451856 + AluSp SINE Alu 1 313 0 3765 66 14 50 chr17 7053090 7053417 -82451136 + L1PA8 LINE L1 5619 5918 -254 2427 108 0 0 chr17 7053417 7053723 -82450830 + AluSc SINE Alu 1 306 -3 3765 66 14 50 chr17 7053723 7053970 -82450583 + L1PA8 LINE L1 5918 6172 0 2279 54 0 0 chr17 7054622 7054882 -82449671 - AluSc SINE Alu -49 260 1 2205 109 13 16 chr17 7055654 7055958 -82448595 + AluSg SINE Alu 1 303 -7 195 280 120 13 chr17 7056779 7056854 -82447699 - MIR SINE MIR -1 261 179 362 127 0 0 chr17 7056854 7056909 -82447644 + MSTD LTR MaLR 1 55 -341 2441 83 0 3 chr17 7056927 7057227 -82447326 - AluSq SINE Alu -14 299 1 447 311 61 25 chr17 7057245 7057441 -82447112 + L1ME3 LINE L1 5766 5968 -202 1011 172 27 11 chr17 7057623 7057809 -82446744 - AluJo SINE Alu -4 308 120 1673 138 32 0 chr17 7057922 7058233 -82446320 - L1MA5A LINE L1 0 6297 5977 251 105 0 0 chr17 7058239 7058277 -82446276 + MLT1A2 LTR MaLR 75 112 -262 2831 204 35 24 chr17 7058741 7059372 -82445181 + LTR9B LTR ERV1 7 644 0 255 245 46 22 chr17 7059460 7059529 -82445024 + L1ME3 LINE L1 6025 6091 -79 990 175 5 63 chr17 7059529 7059701 -82444852 + MER6B DNA MER2_type 1 159 -706 2149 107 0 67 chr17 7059701 7060028 -82444525 - AluSq SINE Alu -8 305 1 990 175 5 63 chr17 7060028 7060078 -82444475 + MER6B DNA MER2_type 159 210 0 255 245 46 22 chr17 7060078 7060144 -82444409 + L1ME3 LINE L1 6091 6163 -7 312 91 0 0 chr17 7060545 7060589 -82443964 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 2118 117 7 26 chr17 7060589 7060898 -82443655 - AluSx SINE Alu -9 303 1 287 320 0 13 chr17 7060901 7060979 -82443574 - L3 LINE CR1 -1269 308 232 2404 74 0 10 chr17 7061548 7061847 -82442706 - AluSg SINE Alu -13 297 2 493 308 128 4 chr17 7063087 7063321 -82441232 - L2 LINE L2 -95 3177 2915 529 195 71 0 chr17 7063900 7064013 -82440540 + L2 LINE L2 3193 3313 0 191 219 0 24 chr17 7064884 7064925 -82439628 - MIR SINE MIR -88 120 81 305 345 34 14 chr17 7065043 7065191 -82439362 - L2 LINE L2 -529 2785 2635 2388 95 0 13 chr17 7065516 7065832 -82438721 - AluSx SINE Alu 0 312 1 2453 83 3 0 chr17 7066418 7066719 -82437834 + AluSx SINE Alu 1 302 -10 285 344 32 8 chr17 7067001 7067126 -82437427 - MIR SINE MIR -96 166 39 322 202 24 12 chr17 7067989 7068073 -82436480 + MIR SINE MIR 65 149 -59 197 253 101 25 chr17 7069144 7069223 -82435330 + MIR3 SINE MIR 102 186 -22 1112 207 45 5 chr17 7071256 7071478 -82433075 - AluJo SINE Alu -81 231 1 433 199 145 48 chr17 7071637 7071802 -82432751 + MER5A DNA MER1_type 4 186 -3 209 353 85 17 chr17 7071805 7072040 -82432513 + L2 LINE L2 2263 2513 -801 244 273 15 0 chr17 7072577 7072643 -82431910 + L2 LINE L2 3247 3313 0 237 65 0 0 chr17 7072655 7072686 -82431867 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 181 173 115 0 chr17 7074717 7074769 -82429784 + L2 LINE L2 2332 2389 -925 207 100 0 0 chr17 7074783 7074813 -82429740 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 256 347 32 0 chr17 7074814 7074909 -82429644 - L2 LINE L2 -13 3300 3203 427 317 76 15 chr17 7074973 7075235 -82429318 + L2 LINE L2 2481 2758 -556 211 321 93 68 chr17 7075589 7075826 -82428727 + L3 LINE CR1 1309 1551 -26 421 242 147 19 chr17 7076269 7076426 -82428127 - MIR SINE MIR -70 192 16 1021 258 141 42 chr17 7076722 7077276 -82427277 + L1MC4a LINE L1 5364 5972 -1836 329 241 68 53 chr17 7078289 7078422 -82426131 + LTR33 LTR ERVL 382 516 -5 353 261 31 68 chr17 7078769 7078930 -82425623 + L2 LINE L2 3156 3310 -3 1427 175 77 17 chr17 7080103 7080400 -82424153 - MER58B DNA MER1_type 0 341 27 235 266 64 73 chr17 7080431 7080540 -82424013 + MER5B DNA MER1_type 1 108 -70 * 562 157 50 92 chr17 7080444 7080621 -82423932 - MER5A DNA MER1_type -9 169 11 225 279 76 25 chr17 7080691 7080770 -82423783 + L2 LINE L2 3187 3269 -3 235 229 157 0 chr17 7080820 7080903 -82423650 + MIR SINE MIR 87 182 -80 204 337 0 11 chr17 7081641 7081733 -82422820 + L2 LINE L2 2597 2687 -627 * 474 214 0 103 chr17 7081721 7081866 -82422687 + MIR SINE MIR 79 208 -54 208 291 74 40 chr17 7082387 7082562 -82421991 - MER5A DNA MER1_type -5 184 4 516 170 0 0 chr17 7083084 7083190 -82421363 + GA-rich Low_complexity Low_complexity 4 109 0 219 380 65 0 chr17 7083198 7083290 -82421263 - MIR SINE MIR -81 127 30 2050 90 25 0 chr17 7084685 7085014 -82419539 - AluSp SINE Alu 0 336 1 184 319 28 28 chr17 7085076 7085148 -82419405 + L2 LINE L2 2427 2498 -816 327 254 40 63 chr17 7085163 7085289 -82419264 - L1MC5 LINE L1 -29 7932 7810 2654 173 16 42 chr17 7086147 7086514 -82418039 + L1MB8 LINE L1 5375 5723 -455 1450 106 55 0 chr17 7086514 7086552 -82418001 + AluSg/x SINE Alu 84 118 -194 206 32 32 0 chr17 7086552 7086583 -82417970 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1450 106 55 0 chr17 7086583 7086761 -82417792 + AluSg/x SINE Alu 118 312 0 2654 173 16 42 chr17 7086761 7086964 -82417589 + L1MB8 LINE L1 5723 5930 -248 189 0 0 0 chr17 7087064 7087085 -82417468 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 703 176 137 0 chr17 7087349 7087480 -82417073 + AluSx SINE Alu 42 190 -122 383 317 128 32 chr17 7087528 7087998 -82416555 + L2 LINE L2 2350 2864 -450 231 323 40 32 chr17 7088153 7088277 -82416276 + L2 LINE L2 2677 2801 -513 203 248 0 88 chr17 7090268 7090393 -82414160 + L2 LINE L2 2932 3045 -227 299 367 10 10 chr17 7091143 7091342 -82413211 + L2 LINE L2 2892 3090 -182 2320 89 0 0 chr17 7091796 7092099 -82412454 + AluSx SINE Alu 1 303 -9 794 257 23 0 chr17 7092906 7093081 -82411472 - MER58A DNA MER1_type -1 223 45 2315 106 0 0 chr17 7093908 7094220 -82410333 - AluSx SINE Alu 0 312 1 239 277 62 39 chr17 7095103 7095233 -82409320 - L2 LINE L2 -219 3053 2921 312 264 20 81 chr17 7095742 7095890 -82408663 + L3b LINE CR1 1290 1428 -155 269 219 106 41 chr17 7096071 7096194 -82408359 + MER5A DNA MER1_type 29 159 -30 636 294 108 5 chr17 7097402 7097606 -82406947 - MIR SINE MIR -22 240 16 2623 172 90 65 chr17 7097747 7098378 -82406175 + MER21B LTR ERV1 267 861 -2 2281 91 0 0 chr17 7098477 7098773 -82405780 - AluY SINE Alu -15 296 1 270 160 0 0 chr17 7099346 7099396 -82405157 + (CA)n Simple_repeat Simple_repeat 2 51 0 273 286 135 0 chr17 7099541 7099674 -82404879 - MIR3 SINE MIR -16 192 42 2053 192 32 68 chr17 7100215 7100681 -82403872 + MLT2B1 LTR ERVL 1 447 -73 2339 78 10 0 chr17 7100681 7100987 -82403566 - AluSp SINE Alu -4 309 1 2053 192 32 68 chr17 7100987 7101051 -82403502 + MLT2B1 LTR ERVL 447 512 -8 1162 195 32 18 chr17 7101329 7101550 -82403003 + MER58A DNA MER1_type 1 224 0 246 32 0 0 chr17 7103066 7103097 -82401456 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 398 20 20 0 chr17 7103096 7103147 -82401406 + (TA)n Simple_repeat Simple_repeat 1 52 0 2275 111 0 0 chr17 7103506 7103812 -82400741 - AluSg SINE Alu -4 306 1 339 191 236 0 chr17 7104009 7104098 -82400455 + LTR16A1 LTR ERVL 7 116 -341 * 1061 146 18 0 chr17 7104097 7104268 -82400285 + MER58A DNA MER1_type 42 215 -9 752 309 52 4 chr17 7104313 7104582 -82399971 + LTR16A1 LTR ERVL 170 451 -6 2138 123 3 0 chr17 7104915 7105224 -82399329 - AluY SINE Alu -1 310 1 367 304 200 24 chr17 7105303 7105553 -82399000 - L2 LINE L2 0 3272 2979 217 344 64 57 chr17 7106024 7106306 -82398247 - L2 LINE L2 -569 2745 2462 262 268 57 32 chr17 7106333 7106456 -82398097 + MIR3 SINE MIR 72 197 -11 541 295 84 0 chr17 7106465 7106655 -82397898 - MIR SINE MIR -41 221 16 432 318 89 11 chr17 7106962 7107141 -82397412 - MLT1J2 LTR MaLR 0 450 258 2365 77 0 0 chr17 7107156 7107454 -82397099 - AluY SINE Alu -11 300 3 1869 141 3 10 chr17 7107456 7107762 -82396791 - AluSq SINE Alu -9 304 1 979 127 18 6 chr17 7107764 7107929 -82396624 - MER58A DNA MER1_type -8 216 50 359 253 11 23 chr17 7107936 7108023 -82396530 - MER58A DNA MER1_type -12 95 10 255 263 95 80 chr17 7108238 7108375 -82396178 - L2 LINE L2 0 3272 3134 1120 186 4 72 chr17 7108481 7108744 -82395809 + AluJo SINE Alu 55 299 -13 265 286 39 0 chr17 7108766 7108843 -82395710 + L2 LINE L2 3162 3241 -31 180 0 0 0 chr17 7108858 7108878 -82395675 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 2162 88 3 33 chr17 7109141 7109446 -82395107 - AluSx SINE Alu -16 296 1 313 329 18 44 chr17 7109505 7109683 -82394870 - MIR3 SINE MIR -54 154 15 2360 64 0 0 chr17 7109758 7110055 -82394498 - AluY SINE Alu -14 297 1 504 68 0 0 chr17 7110076 7110150 -82394403 - Alu SINE Alu 0 310 237 284 270 99 18 chr17 7110328 7110439 -82394114 + MIR3 SINE MIR 87 206 -2 243 351 9 0 chr17 7111372 7111483 -82393070 - L3 LINE CR1 -36 1541 1430 561 329 50 22 chr17 7111703 7111925 -82392628 - MIR SINE MIR -26 236 9 286 308 55 0 chr17 7112410 7112501 -82392052 - L2 LINE L2 -43 3229 3134 790 311 88 26 chr17 7112665 7112787 -82391766 - LTR33 LTR ERVL -3 518 405 4260 34 4 0 chr17 7112787 7113284 -82391269 + L1PA4 LINE L1 5657 6155 0 790 311 88 26 chr17 7113284 7113615 -82390938 - LTR33 LTR ERVL -116 405 37 3106 293 112 38 chr17 7113662 7114604 -82389949 + HAL1 LINE L1 26 897 -1610 2286 97 0 0 chr17 7114604 7114904 -82389649 + AluSx SINE Alu 1 300 -12 3106 293 112 38 chr17 7114904 7115225 -82389328 + HAL1 LINE L1 897 1193 -1314 2733 106 3 5 chr17 7115225 7115601 -82388952 - THE1C LTR MaLR 0 375 1 3106 293 112 38 chr17 7115601 7115702 -82388851 + HAL1 LINE L1 1193 1285 -1222 2693 154 12 51 chr17 7115702 7116120 -82388433 + MLT1C LTR MaLR 1 399 -68 1748 119 47 72 chr17 7116120 7116439 -82388114 - AluJo SINE Alu -1 311 1 2693 154 12 51 chr17 7116439 7116506 -82388047 + MLT1C LTR MaLR 399 467 0 3106 293 112 38 chr17 7116506 7117024 -82387529 + HAL1 LINE L1 1285 2050 -457 1049 282 102 15 chr17 7117024 7117425 -82387128 - L2 LINE L2 -26 3287 2852 1385 283 54 30 chr17 7117439 7117851 -82386702 - L2 LINE L2 -579 2735 2305 2432 204 24 72 chr17 7117851 7118433 -82386120 + MLT2B3 LTR ERVL 1 554 0 1385 283 54 30 chr17 7118433 7118558 -82385995 - L2 LINE L2 -1009 2305 2185 442 294 23 60 chr17 7118572 7118837 -82385716 + HAL1 LINE L1 2055 2309 -198 2538 133 72 8 chr17 7119188 7119588 -82384965 - MSTA LTR MaLR -2 426 1 405 70 0 0 chr17 7120504 7120561 -82383992 + (TC)n Simple_repeat Simple_repeat 2 58 0 1102 196 18 13 chr17 7120571 7120795 -82383758 - AluJo SINE Alu -14 298 74 806 49 0 0 chr17 7120902 7121004 -82383549 - L1P3 LINE L1 -357 5797 5696 213 342 13 0 chr17 7121084 7121160 -82383393 + MIR3 SINE MIR 101 177 -31 351 142 0 57 chr17 7121249 7121326 -82383227 + MIR SINE MIR 103 172 -90 237 317 39 19 chr17 7121751 7121855 -82382698 + L2 LINE L2 3145 3250 -22 1964 95 29 0 chr17 7121909 7122234 -82382319 + AluSg SINE Alu 1 333 0 230 273 15 0 chr17 7122482 7122548 -82382005 + MIR SINE MIR 65 131 -77 871 73 0 0 chr17 7123327 7123436 -82381117 + AluSq/x SINE Alu 25 133 -179 2009 127 0 10 chr17 7123444 7123743 -82380810 + AluSx SINE Alu 1 296 -16 529 307 111 11 chr17 7123750 7124020 -82380533 - MLT1J2 LTR MaLR -144 306 10 1638 65 9 13 chr17 7125000 7125230 -82379323 + AluSc SINE Alu 1 229 -80 2030 90 0 4 chr17 7125330 7125609 -82378944 - AluSx SINE Alu -34 278 1 2468 289 67 22 chr17 7126433 7127760 -82376793 - L1MEc LINE L1 -4410 1986 600 373 266 276 16 chr17 7127847 7128038 -82376515 - MLT1H1 LTR MaLR -189 366 126 1301 212 146 35 chr17 7128038 7128435 -82376118 + MLT2B1 LTR ERVL 1 441 -79 258 32 0 0 chr17 7128441 7128472 -82376081 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 69 0 0 chr17 7128477 7128506 -82376047 + (TATG)n Simple_repeat Simple_repeat 3 31 0 29 0 0 62 chr17 7128509 7128557 -82375996 + AT_rich Low_complexity Low_complexity 1 45 0 365 197 0 0 chr17 7128573 7128639 -82375914 - Tigger5 DNA MER2_type 0 2323 2258 267 219 141 0 chr17 7128694 7128758 -82375795 - Tigger5 DNA MER2_type 0 2323 2251 246 116 0 0 chr17 7128769 7128812 -82375741 + (TG)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr17 7128913 7128955 -82375598 + (TG)n Simple_repeat Simple_repeat 2 43 0 294 77 0 0 chr17 7128961 7129000 -82375553 + MLT2D LTR ERVL 376 414 0 * 399 240 117 13 chr17 7129000 7129138 -82375415 - MLT1H LTR MaLR -421 174 1 1165 152 165 9 chr17 7129144 7129453 -82375100 + MSTA LTR MaLR 1 406 -26 1991 108 3 3 chr17 7129462 7129748 -82374805 - AluSg SINE Alu -1 309 24 277 139 0 0 chr17 7129755 7129798 -82374755 + MSTA LTR MaLR 386 428 0 1410 257 99 4 chr17 7129800 7130306 -82374247 - MER20B DNA MER1_type -61 722 169 324 331 13 53 chr17 7131847 7131998 -82372555 + L2 LINE L2 2607 2751 -563 228 167 0 91 chr17 7132094 7132160 -82372393 + MIR SINE MIR 132 191 -71 555 85 0 0 chr17 7132205 7132287 -82372266 + (CAT)n Simple_repeat Simple_repeat 1 82 0 537 110 30 0 chr17 7133165 7133265 -82371288 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 268 306 153 8 chr17 7133265 7133389 -82371164 - L2 LINE L2 -4 3309 3168 197 341 57 16 chr17 7134009 7134132 -82370421 - MIR3 SINE MIR -78 130 3 827 200 107 19 chr17 7134225 7134430 -82370123 + MIR SINE MIR 16 238 -24 2205 130 0 13 chr17 7134948 7135256 -82369297 + AluSx SINE Alu 2 305 -7 356 206 66 110 chr17 7135610 7135746 -82368807 + MER91B DNA MER1_type 1 130 -60 342 218 0 12 chr17 7135761 7135842 -82368711 + MER91B DNA MER1_type 90 175 -21 193 148 0 148 chr17 7136886 7136947 -82367606 - MIR SINE MIR -56 206 155 379 211 11 0 chr17 7136954 7137044 -82367509 - MER69A DNA AcHobo -23 154 64 262 141 0 141 chr17 7137064 7137128 -82367425 - MIR SINE MIR -105 157 103 358 257 81 95 chr17 7137706 7137916 -82366637 - HAL1 LINE L1 -1 2506 2300 472 202 0 21 chr17 7138088 7138182 -82366371 - MER66A LTR ERV1 0 478 387 2481 89 0 6 chr17 7138202 7138515 -82366038 + AluSq SINE Alu 1 311 -2 1546 182 42 7 chr17 7138590 7138898 -82365655 - MER66B LTR ERV1 -141 345 27 2319 86 3 26 chr17 7139511 7139824 -82364729 - AluSx SINE Alu -6 306 1 298 211 88 70 chr17 7141015 7141129 -82363424 - MIR3 SINE MIR -6 202 87 626 0 14 0 chr17 7141160 7141234 -82363319 + (TTTTC)n Simple_repeat Simple_repeat 5 79 0 1874 181 65 65 chr17 7141601 7142028 -82362525 - MLT1D LTR MaLR -5 500 71 2408 94 0 0 chr17 7142028 7142327 -82362226 + AluSx SINE Alu 2 300 -12 1874 181 65 65 chr17 7142327 7142392 -82362161 - MLT1D LTR MaLR -433 72 8 418 248 10 10 chr17 7143294 7143395 -82361158 + L2 LINE L2 3209 3309 -4 194 304 18 0 chr17 7143436 7143492 -82361061 - MIR3 SINE MIR -31 177 121 1196 239 64 0 chr17 7143495 7143792 -82360761 + MER90 LTR ERV1 297 612 -2 310 363 73 0 chr17 7144019 7144223 -82360330 - L2 LINE L2 -522 2792 2574 2398 104 0 0 chr17 7144835 7145142 -82359411 - AluSq SINE Alu -6 307 1 1260 239 144 17 chr17 7145257 7145667 -82358886 - MLT1C LTR MaLR -5 462 1 203 357 123 7 chr17 7146802 7146956 -82357597 - L2 LINE L2 -544 2770 2599 579 193 36 94 chr17 7147036 7147228 -82357325 + MER91B DNA MER1_type 4 184 -6 558 254 75 10 chr17 7147760 7147961 -82356592 + LTR33 LTR ERVL 1 214 -307 238 290 122 36 chr17 7149058 7149337 -82355216 - L2 LINE L2 -653 2661 2359 409 306 31 83 chr17 7150090 7150204 -82354349 - MIR SINE MIR 0 262 164 2083 122 7 3 chr17 7150204 7150535 -82354018 - AluSx SINE Alu 0 312 2 409 306 31 83 chr17 7150535 7150649 -82353904 - MIR SINE MIR -98 164 46 2293 119 0 0 chr17 7151186 7151481 -82353072 - AluSx SINE Alu -17 295 1 1395 229 44 11 chr17 7151772 7152135 -82352418 + MER74B LTR ERVL 56 430 -192 336 239 11 34 chr17 7152303 7152391 -82352162 + MER74B LTR ERVL 447 532 -90 2023 135 0 20 chr17 7152677 7152980 -82351573 + AluSx SINE Alu 5 301 -11 874 245 5 33 chr17 7155234 7155398 -82349155 + MIR SINE MIR 45 212 -50 2346 99 3 7 chr17 7155398 7155701 -82348852 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr17 7155701 7155724 -82348829 + (TA)n Simple_repeat Simple_repeat 2 24 0 874 245 5 33 chr17 7155724 7155770 -82348783 + MIR SINE MIR 210 250 -12 203 218 141 39 chr17 7156226 7156304 -82348249 - L2 LINE L2 -3 3310 3225 239 222 0 0 chr17 7156590 7156635 -82347918 - MIR SINE MIR -68 140 96 2247 278 75 56 chr17 7156681 7156866 -82347687 - MER45C DNA AcHobo -628 953 773 2441 100 0 0 chr17 7156866 7157175 -82347378 - AluSc SINE Alu 0 309 1 2247 278 75 56 chr17 7157175 7157807 -82346746 - MER45C DNA AcHobo -808 773 115 2406 98 0 0 chr17 7157807 7158112 -82346441 + AluSx SINE Alu 1 305 -7 2247 278 75 56 chr17 7158112 7158190 -82346363 - MER45C DNA AcHobo -1466 115 40 271 167 114 68 chr17 7158453 7158585 -82345968 + (CTGGGG)n Simple_repeat Simple_repeat 4 141 0 311 296 11 0 chr17 7160586 7160674 -82343879 - L1M4 LINE L1 -2265 3881 3793 196 321 12 37 chr17 7161058 7161139 -82343414 + L2 LINE L2 3194 3272 0 734 213 100 0 chr17 7161991 7162151 -82342402 - MER45A DNA AcHobo 0 178 3 1516 107 158 12 chr17 7162201 7162454 -82342099 + AluSg SINE Alu 1 290 -10 840 172 38 59 chr17 7162967 7163153 -82341400 - MER5A DNA MER1_type -1 188 7 6519 181 52 17 chr17 7163448 7165613 -82338940 + L1MB7 LINE L1 3793 6047 -137 2374 104 0 13 chr17 7165613 7165929 -82338624 + AluSx SINE Alu 1 312 0 6519 181 52 17 chr17 7165929 7166052 -82338501 + L1MB7 LINE L1 6047 6164 -20 183 42 0 0 chr17 7166371 7166395 -82338158 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1169 170 43 0 chr17 7166399 7166587 -82337966 + AluJo SINE Alu 1 196 -116 2544 65 0 3 chr17 7166782 7167092 -82337461 + AluY SINE Alu 1 309 -2 961 131 0 14 chr17 7167248 7167393 -82337160 + FLAM_C SINE Alu 1 143 0 366 354 65 10 chr17 7167404 7167712 -82336841 + HAL1 LINE L1 1442 1766 -741 1876 179 3 3 chr17 7168052 7168360 -82336193 - AluJo SINE Alu -4 308 1 380 301 118 71 chr17 7168499 7168821 -82335732 + L1M4 LINE L1 2648 2984 -3162 305 197 14 0 chr17 7168821 7168892 -82335661 - MER69 DNA AcHobo 0 2526 2455 637 287 78 41 chr17 7169014 7169258 -82335295 + L1M4 LINE L1 3026 3278 -2868 2855 32 0 0 chr17 7169556 7169871 -82334682 + AluYb8 SINE Alu 1 315 -3 1315 73 6 0 chr17 7169871 7170035 -82334518 + AluY SINE Alu 133 297 -14 2016 108 0 0 chr17 7170048 7170299 -82334254 + AluSq SINE Alu 1 251 -62 2581 157 8 26 chr17 7170399 7170844 -82333709 + L1MB3 LINE L1 5695 6132 -51 2389 98 0 0 chr17 7170844 7171140 -82333413 + AluSx SINE Alu 1 296 -16 2581 157 8 26 chr17 7171140 7171190 -82333363 + L1MB3 LINE L1 6132 6181 -2 266 209 22 33 chr17 7171196 7171287 -82333266 + (TAA)n Simple_repeat Simple_repeat 3 92 0 24 0 0 0 chr17 7171327 7171351 -82333202 + AT_rich Low_complexity Low_complexity 1 24 0 232 329 76 55 chr17 7171603 7171986 -82332567 + L1MEd LINE L1 330 720 -5399 252 0 0 0 chr17 7172001 7172029 -82332524 + (CA)n Simple_repeat Simple_repeat 1 28 0 288 303 52 32 chr17 7172141 7172296 -82332257 - L2 LINE L2 -932 2382 2225 192 364 65 48 chr17 7172459 7172690 -82331863 + L2 LINE L2 3035 3269 -3 488 276 98 6 chr17 7172974 7173137 -82331416 - MIR SINE MIR -52 210 33 292 318 55 0 chr17 7173649 7173759 -82330794 + MIR SINE MIR 30 145 -63 197 220 40 90 chr17 7174122 7174222 -82330331 + MIR SINE MIR 45 139 -69 394 257 140 0 chr17 7175506 7175642 -82328911 + MIR SINE MIR 65 219 -43 739 226 94 28 chr17 7176697 7176909 -82327644 - MIR SINE MIR -9 253 28 401 281 166 5 chr17 7177287 7177486 -82327067 + MIR SINE MIR 13 243 -19 353 298 6 0 chr17 7178477 7178638 -82325915 + (TG)n Simple_repeat Simple_repeat 1 162 0 256 253 0 53 chr17 7178639 7178734 -82325819 + CT-rich Low_complexity Low_complexity 4 93 0 231 36 0 0 chr17 7178841 7178869 -82325684 + (CA)n Simple_repeat Simple_repeat 2 29 0 2208 112 3 3 chr17 7179351 7179646 -82324907 + AluSg SINE Alu 1 295 -15 326 266 52 32 chr17 7180076 7180225 -82324328 - MIR3 SINE MIR -52 156 33 405 241 58 89 chr17 7181797 7181863 -82322690 + L2 LINE L2 2848 2915 -398 2246 108 0 10 chr17 7181863 7182159 -82322394 + AluSq SINE Alu 5 297 -16 405 241 58 89 chr17 7182159 7182316 -82322237 + L2 LINE L2 2915 3064 -249 2689 239 61 28 chr17 7182366 7182607 -82321946 - L1ME1 LINE L1 -6 6160 5920 802 277 67 65 chr17 7182607 7183001 -82321552 - L1PB3 LINE L1 -229 5925 5533 2197 117 3 0 chr17 7183001 7183300 -82321253 - AluSp SINE Alu -13 300 1 802 277 67 65 chr17 7183300 7183488 -82321065 - L1PB3 LINE L1 -621 5533 5333 2067 124 24 7 chr17 7183488 7183786 -82320767 - AluSg SINE Alu -7 303 1 802 277 67 65 chr17 7183786 7183838 -82320715 - L1PB3 LINE L1 -821 5333 5283 259 288 55 52 chr17 7183841 7183976 -82320577 + L2 LINE L2 3138 3313 0 311 271 124 39 chr17 7183980 7184109 -82320444 + MIR3 SINE MIR 49 188 -20 229 281 27 96 chr17 7184568 7184714 -82319839 + MIR3 SINE MIR 19 154 -54 189 0 0 0 chr17 7185345 7185366 -82319187 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 1063 75 0 0 chr17 7185675 7185808 -82318745 + AluSq/x SINE Alu 1 133 -180 2075 135 0 19 chr17 7185814 7186132 -82318421 + AluSx SINE Alu 1 312 0 339 247 21 11 chr17 7186672 7186765 -82317788 - MIR SINE MIR -74 134 41 1879 65 47 127 chr17 7187285 7187624 -82316929 - AluSx SINE Alu 0 312 1 376 326 22 14 chr17 7187701 7187839 -82316714 + L2 LINE L2 3119 3257 -15 486 255 131 38 chr17 7188412 7188679 -82315874 - MLT1I LTR MaLR -1 408 117 203 286 29 14 chr17 7188743 7188813 -82315740 + MIR3 SINE MIR 118 188 -20 921 191 105 49 chr17 7189382 7189706 -82314847 + L1M4 LINE L1 4125 4466 -1680 208 328 50 42 chr17 7190255 7190374 -82314179 - L2 LINE L2 -43 3229 3110 2356 84 0 0 chr17 7190699 7190997 -82313556 - AluSq SINE Alu -15 298 1 294 29 0 0 chr17 7191325 7191360 -82313193 + (TG)n Simple_repeat Simple_repeat 1 35 0 319 278 68 25 chr17 7191410 7191572 -82312981 - L2 LINE L2 -338 2975 2807 215 359 0 0 chr17 7191563 7191627 -82312926 + L3 LINE CR1 1505 1568 -9 * 319 338 26 7 chr17 7191899 7192050 -82312503 - MIR SINE MIR -3 259 106 486 294 114 5 chr17 7192536 7192747 -82311806 + MIR SINE MIR 3 236 -26 919 127 0 22 chr17 7192930 7193064 -82311489 - FLAM_C SINE Alu 0 133 3 201 121 0 0 chr17 7193389 7193422 -82311131 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1718 165 0 28 chr17 7194283 7194604 -82309949 + AluJo SINE Alu 1 312 0 270 0 0 0 chr17 7194666 7194696 -82309857 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 309 89 0 0 chr17 7194695 7194740 -82309813 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 89 0 0 chr17 7194888 7194933 -82309620 + (CA)n Simple_repeat Simple_repeat 1 45 0 605 280 60 10 chr17 7195112 7195312 -82309241 + MIR SINE MIR 39 248 -14 366 326 72 54 chr17 7195567 7195972 -82308581 + L2 LINE L2 2834 3245 -27 2127 98 0 7 chr17 7196771 7197066 -82307487 + AluSx SINE Alu 9 301 -11 241 319 8 24 chr17 7197123 7197236 -82307317 - MIR SINE MIR -68 140 76 258 32 0 0 chr17 7197761 7197792 -82306761 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 2124 70 29 0 chr17 7197794 7198067 -82306486 - AluSp SINE Alu -32 281 1 344 181 134 79 chr17 7200080 7200207 -82304346 - MIR3 SINE MIR -17 191 58 415 279 16 16 chr17 7200264 7200393 -82304160 + MIR SINE MIR 49 177 -85 2335 66 0 16 chr17 7201115 7201418 -82303135 + AluY SINE Alu 1 298 -13 728 202 0 16 chr17 7201634 7201763 -82302790 + FLAM_C SINE Alu 3 129 -4 27 0 0 0 chr17 7201764 7201791 -82302762 + AT_rich Low_complexity Low_complexity 1 27 0 207 259 59 37 chr17 7201986 7202121 -82302432 + MIR3 SINE MIR 61 198 -10 2360 82 0 13 chr17 7202793 7203108 -82301445 - AluY SINE Alu 0 311 1 258 204 19 0 chr17 7203527 7203581 -82300972 + MER91B DNA MER1_type 8 62 -128 267 305 42 0 chr17 7203883 7203978 -82300575 + MIR3 SINE MIR 110 208 0 2083 132 3 3 chr17 7204075 7204386 -82300167 + AluSx SINE Alu 1 311 -1 273 321 107 15 chr17 7204729 7204950 -82299603 + MIR SINE MIR 1 252 -10 183 42 0 0 chr17 7205008 7205032 -82299521 + (CA)n Simple_repeat Simple_repeat 1 24 0 252 200 14 71 chr17 7205688 7205758 -82298795 + L2 LINE L2 3206 3271 -1 23 54 0 0 chr17 7206383 7206420 -82298133 + GC_rich Low_complexity Low_complexity 1 37 0 180 125 36 18 chr17 7206549 7206605 -82297948 + (CCG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr17 7206624 7206678 -82297875 + GC_rich Low_complexity Low_complexity 1 54 0 226 217 33 22 chr17 7206697 7206789 -82297764 + (CCCCG)n Simple_repeat Simple_repeat 4 96 0 454 275 26 96 chr17 7207695 7207924 -82296629 - L3 LINE CR1 -72 1505 1293 218 180 16 0 chr17 7208624 7208685 -82295868 + (TG)n Simple_repeat Simple_repeat 1 62 0 452 393 32 8 chr17 7209607 7209854 -82294699 + L3 LINE CR1 275 527 -1050 186 256 0 0 chr17 7210009 7210052 -82294501 + L3 LINE CR1 751 793 -784 253 246 15 0 chr17 7210052 7210117 -82294436 + L3 LINE CR1 752 817 -760 1058 110 6 0 chr17 7210543 7210716 -82293837 + (TCC)n Simple_repeat Simple_repeat 2 175 0 937 140 17 3 chr17 7210749 7211103 -82293450 + CT-rich Low_complexity Low_complexity 1 359 0 2042 107 43 0 chr17 7211674 7211973 -82292580 - AluSx SINE Alu 0 312 1 507 345 45 27 chr17 7212080 7212416 -82292137 - L1MC4a LINE L1 -1911 5897 5556 1947 111 6 52 chr17 7212503 7212828 -82291725 + AluSq SINE Alu 1 310 -3 2140 94 44 0 chr17 7212976 7213273 -82291280 + AluSx SINE Alu 1 310 -2 2288 85 3 0 chr17 7213626 7213933 -82290620 + AluSg SINE Alu 1 308 -2 2453 67 0 3 chr17 7214140 7214452 -82290101 + AluY SINE Alu 1 311 0 751 244 15 79 chr17 7214474 7214740 -82289813 - MIR SINE MIR 0 262 14 249 285 66 53 chr17 7215758 7215909 -82288644 - MIR3 SINE MIR -54 154 2 248 308 28 9 chr17 7216102 7216209 -82288344 - LTR67 LTR ERVL -21 536 428 1965 138 13 0 chr17 7216219 7216341 -82288212 + AluSx SINE Alu 1 120 -192 189 0 0 0 chr17 7216341 7216362 -82288191 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1965 138 13 0 chr17 7216362 7216537 -82288016 + AluSx SINE Alu 120 302 -10 344 274 120 8 chr17 7217487 7217604 -82286949 + MIR SINE MIR 19 148 -60 2382 71 0 0 chr17 7217697 7218007 -82286546 - AluSg SINE Alu 0 310 1 2383 96 0 0 chr17 7219525 7219837 -82284716 - AluSx SINE Alu 0 312 1 1086 279 56 37 chr17 7219926 7220303 -82284250 + MLT1K LTR MaLR 1 384 -204 265 310 95 0 chr17 7220695 7220811 -82283742 + MIR SINE MIR 92 218 -44 1120 96 30 0 chr17 7220977 7221170 -82283383 + AluSg/x SINE Alu 140 337 0 195 320 0 39 chr17 7221182 7221260 -82283293 + L2 LINE L2 3188 3262 -10 473 295 42 12 chr17 7221350 7221516 -82283037 + MIR SINE MIR 1 171 -91 553 223 47 27 chr17 7221820 7221968 -82282585 - MIR SINE MIR -2 260 110 201 220 9 119 chr17 7224602 7224711 -82279842 - L2 LINE L2 -1 3312 3216 674 239 55 0 chr17 7225306 7225469 -82279084 + MIR SINE MIR 91 262 0 2152 97 0 13 chr17 7227194 7227502 -82277051 + AluSx SINE Alu 1 304 -8 2449 50 0 7 chr17 7227656 7227955 -82276598 - AluY SINE Alu -14 297 1 288 0 0 0 chr17 7228239 7228271 -82276282 + (CA)n Simple_repeat Simple_repeat 2 33 0 4607 188 173 39 chr17 7228314 7229879 -82274674 - L1MC4 LINE L1 -216 7826 6024 992 300 144 29 chr17 7229873 7231189 -82273364 - L1MEc LINE L1 -4074 2236 770 * 251 345 0 0 chr17 7231256 7231343 -82273210 - L1MEc LINE L1 -5472 647 561 1979 241 86 93 chr17 7231764 7232188 -82272365 - HAL1 LINE L1 -461 2046 1621 1465 153 42 0 chr17 7232188 7232429 -82272124 - AluJo SINE Alu -59 253 3 1979 241 86 93 chr17 7232429 7233242 -82271311 - HAL1 LINE L1 -886 1621 817 552 272 97 53 chr17 7233240 7233279 -82271274 - HAL1 LINE L1 -2150 357 321 * 2379 150 67 12 chr17 7233279 7233685 -82270868 + MSTA LTR MaLR 1 428 0 552 272 97 53 chr17 7233685 7233987 -82270566 - HAL1 LINE L1 -2186 321 1 2127 118 10 0 chr17 7234303 7234613 -82269940 + AluSx SINE Alu 12 302 -10 679 316 51 40 chr17 7235079 7235548 -82269005 + HAL1 LINE L1 1 474 -2033 1031 267 119 38 chr17 7235549 7236070 -82268483 + HAL1 LINE L1 1585 2147 -360 1929 176 38 27 chr17 7236431 7236800 -82267753 + MLT1A2 LTR MaLR 1 373 -1 881 0 0 52 chr17 7238313 7238449 -82266104 + (GAA)n Simple_repeat Simple_repeat 1 129 0 194 315 61 88 chr17 7239186 7239516 -82265037 - L2 LINE L2 -26 3246 2926 906 253 36 44 chr17 7239897 7240261 -82264292 + L1ME2 LINE L1 4886 5246 -900 541 143 151 0 chr17 7240300 7240426 -82264127 + L1MB7 LINE L1 6040 6184 0 604 220 60 0 chr17 7240442 7240592 -82263961 + L1ME2 LINE L1 5232 5390 -756 349 227 77 56 chr17 7240593 7240945 -82263608 + AluSx SINE Alu 1 182 -120 1762 160 14 3 chr17 7240945 7241239 -82263314 + AluSx SINE Alu 1 297 -15 615 250 152 23 chr17 7241256 7241512 -82263041 + L1ME2 LINE L1 5440 5728 -2267 710 198 62 51 chr17 7241513 7241690 -82262863 + MLT1D LTR MaLR 305 483 -22 1041 190 144 9 chr17 7241743 7242035 -82262518 + L1ME2 LINE L1 5835 6164 0 344 266 53 39 chr17 7242073 7242280 -82262273 + L1MC4 LINE L1 7832 8041 -1 451 176 7 3 chr17 7242597 7242754 -82261799 + MER3 DNA MER1_type 1 203 -6 466 233 30 30 chr17 7242920 7243053 -82261500 + MIR3 SINE MIR 30 162 -46 243 266 76 38 chr17 7243327 7243406 -82261147 - MIR SINE MIR -147 115 34 223 170 0 21 chr17 7243688 7243735 -82260818 + (GGGTG)n Simple_repeat Simple_repeat 4 49 0 548 286 66 31 chr17 7244341 7244537 -82260016 + MIR SINE MIR 48 250 -12 263 256 0 12 chr17 7244571 7244657 -82259896 + L1P5 LINE L1 5346 5430 -721 289 286 29 0 chr17 7244754 7244859 -82259694 + L1MC4a LINE L1 5796 5903 -1905 368 273 11 0 chr17 7246886 7246974 -82257579 + MIR3 SINE MIR 79 167 -41 452 211 32 0 chr17 7247953 7248048 -82256505 - MER5A DNA MER1_type -80 109 12 421 220 214 29 chr17 7248125 7248298 -82256255 + HAL1 LINE L1 7 211 -2296 763 44 0 0 chr17 7248300 7248390 -82256163 - 5S rRNA rRNA -31 90 1 1214 268 82 31 chr17 7248390 7248901 -82255652 + HAL1 LINE L1 202 738 -1769 3306 216 65 22 chr17 7248908 7250142 -82254411 + L1ME2 LINE L1 4902 6333 -1 306 290 21 11 chr17 7250156 7250249 -82254304 + HAL1 LINE L1 776 869 -1638 1025 229 64 74 chr17 7250289 7250788 -82253765 + HAL1 LINE L1 971 1464 -1043 1961 199 43 21 chr17 7250832 7251250 -82253303 + L1MDa LINE L1 17 443 -6097 1366 165 30 33 chr17 7251280 7251583 -82252970 + L1MD1 LINE L1 5446 5747 -495 1087 121 0 0 chr17 7251583 7251724 -82252829 - AluJb SINE Alu -15 297 157 1971 172 135 31 chr17 7251726 7252179 -82252374 + L1MD1 LINE L1 5742 6241 -1 549 128 35 106 chr17 7252174 7252315 -82252238 + HAL1 LINE L1 1566 1696 -811 * 785 114 16 32 chr17 7252324 7252447 -82252106 + FLAM_C SINE Alu 19 139 -4 232 317 24 0 chr17 7252452 7252534 -82252019 + HAL1 LINE L1 1692 1775 -732 254 300 8 42 chr17 7253027 7253147 -82251406 + L1ME2 LINE L1 5966 6081 -83 326 376 143 8 chr17 7253257 7253515 -82251038 + L3 LINE CR1 1284 1576 -1 247 330 112 86 chr17 7255142 7255375 -82249178 + L2 LINE L2 2945 3183 -89 197 292 233 8 chr17 7256343 7256463 -82248090 + MIR3 SINE MIR 16 162 -46 372 233 68 53 chr17 7256923 7257056 -82247497 - L2 LINE L2 0 3313 3179 28 29 0 0 chr17 7257742 7257777 -82246776 + AT_rich Low_complexity Low_complexity 1 35 0 1708 134 4 8 chr17 7257845 7258099 -82246454 - AluJo SINE Alu 0 312 60 1907 146 31 0 chr17 7258642 7258929 -82245624 - AluJo SINE Alu -15 297 2 25 51 0 0 chr17 7259085 7259124 -82245429 + AT_rich Low_complexity Low_complexity 1 39 0 184 297 94 16 chr17 7259143 7259207 -82245346 + MIR SINE MIR 25 93 -169 277 345 75 51 chr17 7259662 7259924 -82244629 + L2 LINE L2 2444 2698 -616 2160 118 0 0 chr17 7259924 7260212 -82244341 + AluSq SINE Alu 1 288 -25 189 94 0 0 chr17 7260218 7260250 -82244303 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 277 345 75 51 chr17 7260250 7260313 -82244240 + L2 LINE L2 2702 2784 -530 997 285 142 34 chr17 7260313 7261900 -82242653 + L1ME3A LINE L1 4162 5929 -233 544 156 0 11 chr17 7262050 7262140 -82242413 + Tigger7 DNA MER2_type 22 110 -595 2364 91 0 0 chr17 7262140 7262437 -82242116 - AluSx SINE Alu -15 297 1 1044 96 0 7 chr17 7262437 7262573 -82241980 - AluSq/x SINE Alu -177 135 1 1214 188 14 5 chr17 7262588 7262811 -82241742 + Tigger7 DNA MER2_type 201 425 -308 1342 83 0 0 chr17 7262811 7262980 -82241573 + AluY SINE Alu 140 308 -3 330 248 102 80 chr17 7263839 7263881 -82240672 - MIR3 SINE MIR -52 156 116 2171 120 0 3 chr17 7263881 7264180 -82240373 + AluSx SINE Alu 1 298 -14 330 248 102 80 chr17 7264180 7264274 -82240279 - MIR3 SINE MIR -92 116 17 214 345 126 8 chr17 7264547 7264666 -82239887 - L2 LINE L2 -6 3266 3134 388 242 11 22 chr17 7264779 7264870 -82239683 + MER21B LTR ERV1 1 90 -773 3585 188 98 29 chr17 7264892 7265159 -82239394 + MER21B LTR ERV1 19 266 -597 2377 94 3 0 chr17 7265159 7265467 -82239086 + AluSp SINE Alu 1 309 -4 3585 188 98 29 chr17 7265467 7265988 -82238565 + MER21B LTR ERV1 266 861 -2 2281 111 0 3 chr17 7266285 7266583 -82237970 + AluSx SINE Alu 1 297 -15 2242 55 0 4 chr17 7266752 7267023 -82237530 - AluSg SINE Alu -40 270 1 2278 92 0 0 chr17 7267747 7268062 -82236491 + AluSx SINE Alu 1 315 0 2072 111 48 3 chr17 7268499 7268788 -82235765 + AluSx SINE Alu 1 302 -10 883 143 12 20 chr17 7268822 7269066 -82235487 + GA-rich Low_complexity Low_complexity 1 242 0 442 261 85 20 chr17 7269188 7269341 -82235212 + L1ME3A LINE L1 5989 6151 -19 1787 170 0 0 chr17 7269341 7269630 -82234923 - AluJo SINE Alu -19 293 5 342 185 46 0 chr17 7269758 7269823 -82234730 - HsTC2 DNA Tc2 -3 1895 1828 533 335 62 21 chr17 7269961 7270298 -82234255 + L1MC/D LINE L1 5292 5642 -2166 216 97 0 0 chr17 7270325 7270356 -82234197 + (TA)n Simple_repeat Simple_repeat 1 31 0 507 312 55 18 chr17 7273701 7273919 -82230634 - L2 LINE L2 -427 2887 2662 321 26 0 0 chr17 7274444 7274482 -82230071 + (CA)n Simple_repeat Simple_repeat 1 38 0 211 250 68 57 chr17 7275021 7275109 -82229444 - L3 LINE CR1 -151 1426 1338 2217 112 7 7 chr17 7275292 7275595 -82228958 + AluSx SINE Alu 1 303 -9 1657 149 91 0 chr17 7275632 7275908 -82228645 - AluSx SINE Alu -11 301 1 301 281 70 9 chr17 7276527 7276641 -82227912 + MER5C DNA MER1_type 1 121 -203 336 181 19 67 chr17 7276653 7276758 -82227795 + MER5C DNA MER1_type 225 324 0 307 322 17 17 chr17 7279330 7279504 -82225049 - L1ME LINE L1 -364 5757 5584 1462 156 0 13 chr17 7279803 7280055 -82224498 + AluSx SINE Alu 61 309 0 1152 211 97 20 chr17 7280067 7280365 -82224188 + L1MC4 LINE L1 5296 5616 -2192 383 186 72 10 chr17 7280370 7280467 -82224086 - MER50 LTR ERV1 -150 584 482 5907 200 71 74 chr17 7280467 7281792 -82222761 + L1MC4 LINE L1 5620 6870 -1125 1870 100 34 65 chr17 7281792 7282108 -82222445 - AluSx SINE Alu 0 307 1 5907 200 71 74 chr17 7282108 7283230 -82221323 + L1MC4 LINE L1 6870 7993 -2 3207 206 36 16 chr17 7283241 7283935 -82220618 + L1ME2 LINE L1 5431 6138 -26 2484 90 0 3 chr17 7283999 7284310 -82220243 - AluSx SINE Alu -2 310 1 630 324 62 35 chr17 7284555 7284895 -82219658 + L1MC4 LINE L1 7694 8042 0 201 74 0 0 chr17 7286406 7286433 -82218120 + (CA)n Simple_repeat Simple_repeat 2 28 0 406 258 101 22 chr17 7293524 7293703 -82210850 + MIR SINE MIR 49 256 -6 246 305 4 26 chr17 7294745 7294839 -82209714 - MIR SINE MIR -67 141 48 3063 222 131 12 chr17 7295007 7295968 -82208585 + L1MC4 LINE L1 6393 7467 -575 799 246 135 3 chr17 7295955 7296244 -82208309 + L1MD3 LINE L1 7657 7983 -12 * 4057 175 47 56 chr17 7296289 7297267 -82207286 + LTR5 LTR ERVK 1 969 0 405 262 248 0 chr17 7297342 7297483 -82207070 - MER5A DNA MER1_type 0 189 14 314 270 0 0 chr17 7297665 7297739 -82206814 + MIR SINE MIR 68 141 -121 506 263 154 65 chr17 7297816 7298231 -82206322 + L3 LINE CR1 726 1177 -400 569 276 58 45 chr17 7298293 7298536 -82206017 - MER102b DNA MER1_type -48 293 48 471 275 191 11 chr17 7298571 7298844 -82205709 + L3 LINE CR1 1254 1575 -2 204 67 0 0 chr17 7299113 7299143 -82205410 + (T)n Simple_repeat Simple_repeat 1 30 0 282 234 0 0 chr17 7299250 7299314 -82205239 + MIR SINE MIR 185 248 -14 723 287 42 87 chr17 7299459 7299814 -82204739 - L2 LINE L2 -446 2868 2530 1980 51 0 8 chr17 7300810 7301047 -82203506 + AluY SINE Alu 67 301 -10 1018 267 75 20 chr17 7302841 7302875 -82201678 - L2 LINE L2 -17 3296 3265 2172 115 46 0 chr17 7302875 7303224 -82201329 - MER47A DNA MER2_type -1 365 1 1018 267 75 20 chr17 7303224 7303791 -82200762 - L2 LINE L2 -48 3265 2670 908 161 8 128 chr17 7303797 7304046 -82200507 + MER20 DNA MER1_type 1 219 0 196 103 0 0 chr17 7305407 7305436 -82199117 + MIR SINE MIR 224 252 -10 203 354 0 0 chr17 7305856 7305938 -82198615 + C-rich Low_complexity Low_complexity 6 87 0 200 103 0 0 chr17 7306228 7306257 -82198296 + MIR SINE MIR 224 252 -10 2373 100 0 0 chr17 7308098 7308389 -82196164 + AluSc SINE Alu 2 292 -17 405 286 2 24 chr17 7309161 7309313 -82195240 + MIR SINE MIR 16 160 -48 1839 146 3 48 chr17 7309326 7309635 -82194918 + AluJb SINE Alu 1 295 -17 446 0 19 0 chr17 7309701 7309755 -82194798 + (TC)n Simple_repeat Simple_repeat 2 56 0 205 284 0 15 chr17 7310951 7311018 -82193535 + G-rich Low_complexity Low_complexity 2 67 0 796 271 19 25 chr17 7311344 7311652 -82192901 - L1MEc LINE L1 -5966 430 44 986 149 14 0 chr17 7311907 7312114 -82192439 - AluSx SINE Alu 0 349 141 611 99 0 0 chr17 7312114 7312195 -82192358 - AluSx SINE Alu -231 82 2 468 212 128 33 chr17 7312342 7312598 -82191955 + LTR50 LTR ERVL 216 586 -209 293 244 99 45 chr17 7312614 7312815 -82191738 - L1M4 LINE L1 -747 5399 5188 409 218 23 68 chr17 7312948 7313081 -82191472 - MER112 DNA MER1_type -6 254 128 185 105 0 53 chr17 7313089 7313127 -82191426 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1961 91 76 0 chr17 7313141 7313433 -82191120 - AluSx SINE Alu 0 312 1 219 239 76 65 chr17 7314190 7314282 -82190271 - MIR3 SINE MIR -35 173 81 2414 94 0 0 chr17 7314407 7314705 -82189848 + AluSc SINE Alu 1 298 -11 235 289 26 26 chr17 7314775 7314851 -82189702 - ORSL DNA AcHobo 0 275 200 2059 173 66 12 chr17 7314915 7315325 -82189228 + MSTB1 LTR MaLR 1 432 0 2161 118 0 37 chr17 7315553 7315874 -82188679 - AluSx SINE Alu -3 309 1 287 100 0 0 chr17 7315874 7315914 -82188639 - Alu SINE Alu -259 41 2 252 188 318 0 chr17 7315915 7316000 -82188553 - MER112 DNA MER1_type -141 119 8 1823 121 38 11 chr17 7316384 7316648 -82187905 - AluSx SINE Alu -41 271 1 631 245 159 14 chr17 7316674 7316882 -82187671 - MIR SINE MIR -10 252 15 224 261 204 13 chr17 7316993 7317150 -82187403 + L3 LINE CR1 1192 1378 -199 2345 98 0 0 chr17 7317181 7317476 -82187077 + AluSg SINE Alu 1 295 -15 2182 127 3 3 chr17 7318355 7318662 -82185891 - AluSg SINE Alu -3 307 1 517 258 108 27 chr17 7318667 7318853 -82185700 + L2 LINE L2 3113 3313 0 2391 97 13 0 chr17 7320195 7320494 -82184059 - AluSx SINE Alu -9 303 1 749 316 22 26 chr17 7320582 7320895 -82183658 - L1ME LINE L1 -426 5695 5384 2504 79 0 3 chr17 7321978 7322283 -82182270 - AluSg SINE Alu -6 304 1 242 243 65 19 chr17 7322329 7322436 -82182117 - L1ME4a LINE L1 -11 6110 5999 232 293 115 5 chr17 7322490 7322681 -82181872 - L1ME4a LINE L1 -218 5903 5692 2088 120 0 17 chr17 7322682 7322981 -82181572 + AluSx SINE Alu 1 294 -18 1030 125 0 80 chr17 7322983 7323159 -82181394 + AluSg/x SINE Alu 138 299 -13 322 266 126 14 chr17 7323159 7323302 -82181251 - L1ME4a LINE L1 -412 5709 5551 267 278 106 100 chr17 7323461 7323554 -82180999 - MIR SINE MIR -62 200 104 2429 74 0 35 chr17 7323554 7323865 -82180688 + AluSq SINE Alu 1 300 -13 267 278 106 100 chr17 7323865 7323951 -82180602 - MIR SINE MIR -158 104 20 279 274 45 101 chr17 7325231 7325410 -82179143 - MIR SINE MIR -37 225 57 183 284 198 0 chr17 7325784 7325865 -82178688 + L2 LINE L2 3162 3258 -14 183 294 103 0 chr17 7325975 7326043 -82178510 + L2 LINE L2 3149 3223 -49 216 97 0 0 chr17 7326098 7326129 -82178424 + (CA)n Simple_repeat Simple_repeat 1 31 0 494 262 70 60 chr17 7328499 7328791 -82175762 - L2 LINE L2 -69 3244 2947 1051 207 4 40 chr17 7328791 7329018 -82175535 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr17 7329075 7329095 -82175458 + (T)n Simple_repeat Simple_repeat 1 20 0 656 172 37 15 chr17 7329294 7329428 -82175125 + AluSg/x SINE Alu 135 271 -39 335 291 99 0 chr17 7329450 7329591 -82174962 + L1MC/D LINE L1 5655 5809 -1999 2396 47 0 7 chr17 7329593 7329871 -82174682 + AluY SINE Alu 17 292 -19 1598 216 100 10 chr17 7329899 7330381 -82174172 + L1ME2 LINE L1 5633 6157 -7 2005 65 4 0 chr17 7330402 7330649 -82173904 - AluY SINE Alu -63 248 1 2035 115 21 7 chr17 7331490 7331777 -82172776 - AluSg1 SINE Alu -18 291 1 259 183 133 0 chr17 7332484 7332544 -82172009 - MIR3 SINE MIR -29 179 112 810 282 103 46 chr17 7332771 7333335 -82171218 + MLT1L LTR MaLR 6 601 -14 223 337 32 11 chr17 7333356 7333451 -82171102 - MIR3 SINE MIR -102 106 10 441 315 22 28 chr17 7334312 7334490 -82170063 + MIR SINE MIR 20 196 -66 279 333 79 9 chr17 7336659 7336773 -82167780 - L3 LINE CR1 -1271 306 185 297 254 0 0 chr17 7337792 7337851 -82166702 - L2 LINE L2 -4 3309 3251 267 208 0 0 chr17 7338058 7338111 -82166442 + L2 LINE L2 3261 3313 0 420 245 7 0 chr17 7338171 7338311 -82166242 + L1ME4a LINE L1 5685 5828 -293 2435 76 0 3 chr17 7338392 7338683 -82165870 + AluSq SINE Alu 1 290 -23 686 269 108 11 chr17 7338824 7339110 -82165443 - L1ME4a LINE L1 -248 5873 5560 306 0 0 0 chr17 7339967 7340001 -82164552 + (A)n Simple_repeat Simple_repeat 1 34 0 442 336 36 38 chr17 7340868 7341285 -82163268 + L2 LINE L2 2097 2512 -802 373 310 66 10 chr17 7341377 7341574 -82162979 - L2 LINE L2 -1103 2211 2004 269 349 38 9 chr17 7341900 7342006 -82162547 + L2 LINE L2 3133 3241 -31 1368 105 4 0 chr17 7342011 7342261 -82162292 + (TGGA)n Simple_repeat Simple_repeat 1 251 0 226 296 102 11 chr17 7342261 7342349 -82162204 - L2 LINE L2 0 3313 3218 226 370 73 12 chr17 7342723 7342888 -82161665 - L2 LINE L2 0 3272 3098 468 0 0 0 chr17 7343084 7343136 -82161417 + (CA)n Simple_repeat Simple_repeat 2 53 0 629 313 103 17 chr17 7343165 7343698 -82160855 + L1ME4a LINE L1 5405 5983 -138 2271 92 24 3 chr17 7344242 7344534 -82160019 + AluSg SINE Alu 1 298 -12 2305 103 0 3 chr17 7345296 7345596 -82158957 - AluSx SINE Alu -13 299 1 830 292 4 26 chr17 7348487 7348661 -82155892 + MIR SINE MIR 35 204 -58 2117 122 0 25 chr17 7348661 7349027 -82155526 + AluSx SINE Alu 1 312 0 830 292 4 26 chr17 7349027 7349085 -82155468 + MIR SINE MIR 204 262 0 209 222 0 0 chr17 7349316 7349361 -82155192 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2384 94 0 0 chr17 7349379 7349676 -82154877 - AluSx SINE Alu -15 297 1 1138 82 0 0 chr17 7349676 7349811 -82154742 - AluSq/x SINE Alu -178 135 1 231 224 167 32 chr17 7350642 7350798 -82153755 - L2 LINE L2 -238 3034 2858 2249 104 3 0 chr17 7351335 7351634 -82152919 + AluSg SINE Alu 1 300 -10 237 180 0 0 chr17 7354122 7354172 -82150381 + CT-rich Low_complexity Low_complexity 2 51 0 293 270 73 73 chr17 7354607 7354907 -82149646 + L2 LINE L2 2949 3248 -24 573 308 59 0 chr17 7355741 7355957 -82148596 + MIR SINE MIR 7 246 -16 204 214 0 0 chr17 7357259 7357301 -82147252 + CT-rich Low_complexity Low_complexity 1 42 0 383 185 50 8 chr17 7357385 7357504 -82147049 + GA-rich Low_complexity Low_complexity 3 126 0 21 0 0 0 chr17 7357525 7357546 -82147007 + AT_rich Low_complexity Low_complexity 1 21 0 957 155 0 0 chr17 7357573 7357816 -82146737 + L1PB3 LINE L1 5859 6151 -3 2166 112 17 0 chr17 7357877 7358173 -82146380 - AluSq SINE Alu -12 301 1 3036 173 17 6 chr17 7358335 7358877 -82145676 - MER6A DNA MER2_type 0 605 58 713 151 0 0 chr17 7358888 7359007 -82145546 - AluJb SINE Alu -4 308 190 370 152 0 80 chr17 7359008 7359083 -82145470 - MER6 DNA MER2_type -82 62 -1 2285 96 0 0 chr17 7359150 7359473 -82145080 - AluSc SINE Alu 0 323 1 781 201 69 0 chr17 7359723 7359897 -82144656 - MER20 DNA MER1_type 0 219 34 677 236 55 0 chr17 7360078 7360243 -82144310 + MER97c DNA MER1_type? 5 178 -912 225 0 0 0 chr17 7360668 7360693 -82143860 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr17 7360851 7360886 -82143667 + AT_rich Low_complexity Low_complexity 1 35 0 264 59 0 0 chr17 7361334 7361368 -82143185 + (CA)n Simple_repeat Simple_repeat 2 35 0 825 122 0 20 chr17 7361392 7361641 -82142912 + (TG)n Simple_repeat Simple_repeat 1 243 0 305 221 126 11 chr17 7361977 7362072 -82142481 - MIR SINE MIR -62 146 41 23 68 0 0 chr17 7363348 7363392 -82141161 + GC_rich Low_complexity Low_complexity 1 44 0 218 307 13 0 chr17 7364152 7364227 -82140326 - L2 LINE L2 -11 3261 3186 766 143 33 91 chr17 7364669 7364800 -82139753 - L1MA6 LINE L1 0 6300 6184 2409 97 0 6 chr17 7364800 7365111 -82139442 - AluSx SINE Alu -3 309 1 766 143 33 91 chr17 7365111 7365189 -82139364 - L1MA6 LINE L1 -116 6184 6103 4754 54 29 2 chr17 7365337 7365966 -82138587 - L1PA8 LINE L1 0 6172 5527 564 292 75 18 chr17 7366010 7366236 -82138317 + MIR SINE MIR 21 259 -3 621 78 0 49 chr17 7366327 7366429 -82138124 + AluY SINE Alu 208 304 -7 596 273 116 29 chr17 7366553 7366898 -82137655 + L1M4 LINE L1 4495 4869 -1277 1315 181 24 74 chr17 7366912 7367037 -82137516 + Charlie2a DNA MER1_type 1011 1141 -1721 2410 77 0 48 chr17 7367037 7367349 -82137204 - AluSg SINE Alu -13 297 1 1315 181 24 74 chr17 7367349 7367644 -82136909 + Charlie2a DNA MER1_type 1141 1410 -1452 1855 174 106 26 chr17 7367663 7368088 -82136465 + LTR2B LTR ERV1 32 490 0 249 200 67 13 chr17 7368418 7368493 -82136060 + L1MD3 LINE L1 7905 7983 -12 22 0 0 0 chr17 7368555 7368577 -82135976 + AT_rich Low_complexity Low_complexity 1 22 0 2266 110 10 0 chr17 7368577 7368887 -82135666 - AluSq SINE Alu 0 313 1 1058 149 199 10 chr17 7368938 7369139 -82135414 + AluJb SINE Alu 1 239 -73 358 328 64 17 chr17 7369604 7369816 -82134737 - MLT1H LTR MaLR -150 264 65 1086 250 37 10 chr17 7370003 7370299 -82134254 + Charlie2a DNA MER1_type 1475 1778 -1084 705 145 0 0 chr17 7370299 7370416 -82134137 + FRAM SINE Alu 52 168 -8 25 0 0 0 chr17 7370563 7370588 -82133965 + AT_rich Low_complexity Low_complexity 1 25 0 2276 99 0 0 chr17 7371147 7371439 -82133114 - AluSc SINE Alu -16 293 2 3347 241 102 35 chr17 7371627 7372388 -82132165 + L2 LINE L2 1631 2340 -973 2100 106 29 4 chr17 7372388 7372662 -82131891 + AluSx SINE Alu 1 281 -31 3347 241 102 35 chr17 7372662 7372986 -82131567 + L2 LINE L2 2340 2641 -672 2493 115 20 54 chr17 7372986 7373229 -82131324 - MSTA LTR MaLR 0 428 178 2271 117 0 7 chr17 7373229 7373537 -82131016 - AluSg SINE Alu -4 306 1 2493 115 20 54 chr17 7373537 7373549 -82131004 - MSTA LTR MaLR -250 178 167 2530 71 0 3 chr17 7373549 7373858 -82130695 - AluY SINE Alu -3 308 1 2493 115 20 54 chr17 7373858 7374044 -82130509 - MSTA LTR MaLR -261 167 1 3347 241 102 35 chr17 7374044 7374284 -82130269 + L2 LINE L2 2641 2864 -449 2372 94 3 3 chr17 7374284 7374582 -82129971 + AluSx SINE Alu 1 298 -14 6874 45 7 2 chr17 7374583 7375773 -82128780 + L1PA6 LINE L1 4960 6152 -2 3347 241 102 35 chr17 7375773 7376023 -82128530 + L2 LINE L2 2863 3312 -1 373 316 84 77 chr17 7375997 7376904 -82127649 - L2 LINE L2 -796 2518 1606 * 300 137 0 0 chr17 7377354 7377405 -82127148 + (TA)n Simple_repeat Simple_repeat 1 51 0 22 35 0 0 chr17 7377413 7377442 -82127111 + AT_rich Low_complexity Low_complexity 1 29 0 203 232 62 0 chr17 7377444 7377556 -82126997 + (TA)n Simple_repeat Simple_repeat 1 119 0 938 220 11 0 chr17 7377556 7377733 -82126820 - AluJo SINE Alu -17 295 117 861 113 7 7 chr17 7377764 7377906 -82126647 - L1MB8 LINE L1 -11 6167 6026 346 137 0 0 chr17 7377906 7377957 -82126596 + L1 LINE L1 17 67 -7498 17905 168 47 37 chr17 7378111 7380070 -82124483 + L1 LINE L1 16 1954 -5611 328 60 0 8 chr17 7380070 7380121 -82124432 + MER4E LTR ERV1 653 692 -74 17905 168 47 37 chr17 7380121 7382867 -82121686 + L1 LINE L1 1954 4821 -2744 5219 135 18 68 chr17 7382870 7383875 -82120678 - HERVH LTR ERV1 -3619 4094 3140 * 8686 162 37 40 chr17 7383854 7386405 -82118148 - HERVH LTR ERV1 -3622 2907 793 2840 129 9 24 chr17 7386459 7386925 -82117628 - HERVH LTR ERV1 -7254 459 1 1226 171 129 89 chr17 7386932 7387358 -82117195 - LTR7 LTR ERV1 -7 443 1 3012 211 8 3 chr17 7387358 7388016 -82116537 + L1 LINE L1 5755 6415 -1150 933 88 0 0 chr17 7388017 7388130 -82116423 + AluY SINE Alu 1 113 -198 1824 186 121 38 chr17 7388347 7388794 -82115759 - LTR2B LTR ERV1 0 490 7 3208 246 192 42 chr17 7388813 7390650 -82113903 - HAL1 LINE L1 -145 2362 252 1895 251 76 44 chr17 7390660 7390978 -82113575 + L2 LINE L2 2286 2592 -721 2016 73 4 0 chr17 7390978 7391238 -82113315 + L1PA8 LINE L1 5912 6172 0 1895 251 76 44 chr17 7391238 7391847 -82112706 + L2 LINE L2 2592 3254 -59 5731 137 9 17 chr17 7391849 7393195 -82111358 + L1MA3 LINE L1 4333 5668 -637 3749 204 53 4 chr17 7393198 7393894 -82110659 + L1PA12 LINE L1 1 730 -6851 * 5647 144 24 19 chr17 7393890 7394839 -82109714 + L1PA13 LINE L1 4379 5342 -821 2427 96 0 0 chr17 7394839 7395151 -82109402 - AluSx SINE Alu 0 312 1 5647 144 24 19 chr17 7395151 7395958 -82108595 + L1PA13 LINE L1 5342 6143 -20 4243 109 15 14 chr17 7395972 7396466 -82108087 + L1MA3 LINE L1 5652 6152 -153 2274 67 3 11 chr17 7396466 7396792 -82107761 + AluY SINE Alu 1 324 0 4243 109 15 14 chr17 7396792 7396947 -82107606 + L1MA3 LINE L1 6152 6305 0 1911 221 81 109 chr17 7396996 7397447 -82107106 + L1ME LINE L1 503 965 -5575 642 151 0 0 chr17 7397447 7397553 -82107000 + L1MA4 LINE L1 6180 6285 -15 1911 221 81 109 chr17 7397553 7397602 -82106951 + L1ME LINE L1 965 1014 -5526 2355 91 0 0 chr17 7397602 7397900 -82106653 - AluSg SINE Alu -12 298 1 1911 221 81 109 chr17 7397900 7398913 -82105640 + L1ME LINE L1 1014 1970 -4570 1988 152 3 0 chr17 7398913 7399232 -82105321 + AluSx SINE Alu 1 312 0 300 214 18 0 chr17 7399325 7399381 -82105172 + MER77 LTR ERV1 292 348 -257 555 238 26 16 chr17 7399420 7399609 -82104944 + L1ME LINE L1 2397 2587 -3953 297 0 0 0 chr17 7400348 7400381 -82104172 + (CA)n Simple_repeat Simple_repeat 2 34 0 600 284 26 0 chr17 7400991 7401146 -82103407 + MER63 DNA MER1_type 1 785 -277 2341 110 0 0 chr17 7401150 7401489 -82103064 + AluSg1 SINE Alu 1 339 0 1265 219 64 0 chr17 7401841 7402106 -82102447 + AluJo SINE Alu 1 282 -30 2373 80 7 3 chr17 7404089 7404391 -82100162 - AluY SINE Alu -8 303 1 2482 86 0 0 chr17 7404392 7404693 -82099860 - AluSg SINE Alu -9 301 1 200 326 184 0 chr17 7404884 7404982 -82099571 + MIR SINE MIR 15 130 -132 205 248 171 19 chr17 7405030 7405135 -82099418 + MIR SINE MIR 116 236 -26 2296 93 3 37 chr17 7406884 7407208 -82097345 - AluSq SINE Alu 0 313 1 32 43 0 0 chr17 7407509 7407555 -82096998 + AT_rich Low_complexity Low_complexity 1 46 0 575 209 25 61 chr17 7407580 7407776 -82096777 - L1ME1 LINE L1 -6 6160 5972 252 0 0 0 chr17 7409668 7409696 -82094857 + (TG)n Simple_repeat Simple_repeat 2 29 0 2486 76 0 0 chr17 7410106 7410407 -82094146 + AluSg SINE Alu 1 301 -9 2408 72 3 0 chr17 7410911 7411202 -82093351 + AluSp SINE Alu 1 292 -21 243 0 0 0 chr17 7411759 7411786 -82092767 + (CACAA)n Simple_repeat Simple_repeat 3 29 0 295 221 147 22 chr17 7413040 7413176 -82091377 + Charlie8 DNA MER1_type 95 247 -2170 2081 107 4 4 chr17 7413978 7414283 -82090270 + AluSg SINE Alu 1 305 0 803 214 77 72 chr17 7414384 7414785 -82089768 - L1MC5 LINE L1 -54 7907 7505 24 0 0 0 chr17 7414995 7415019 -82089534 + AT_rich Low_complexity Low_complexity 1 24 0 7378 31 0 0 chr17 7415032 7416395 -82088158 - L1PA4 LINE L1 0 6155 4769 268 274 21 0 chr17 7416859 7416954 -82087599 + MIR SINE MIR 47 143 -119 623 256 53 19 chr17 7417021 7417228 -82087325 - MIR SINE MIR 0 262 49 3735 45 0 0 chr17 7417430 7417877 -82086676 - L1PA8 LINE L1 -5 6167 5721 422 302 105 12 chr17 7418754 7418926 -82085627 + MIR3 SINE MIR 19 206 -2 460 252 24 155 chr17 7419659 7420040 -82084513 + L2 LINE L2 2904 3234 -38 15661 152 15 24 chr17 7422152 7425270 -82079283 + L1MA3 LINE L1 2950 6007 -1717 225 0 0 0 chr17 7425270 7425295 -82079258 + (TG)n Simple_repeat Simple_repeat 2 26 0 15661 152 15 24 chr17 7425295 7426822 -82077731 + L1MA3 LINE L1 6007 7547 -177 1797 220 74 16 chr17 7427395 7427744 -82076809 - L1MB5 LINE L1 0 6174 5794 2073 84 0 15 chr17 7427744 7428017 -82076536 - AluSx SINE Alu -8 304 36 1797 220 74 16 chr17 7428017 7428099 -82076454 - L1MB5 LINE L1 -380 5794 5718 492 213 4 12 chr17 7428099 7428212 -82076341 + MER5A DNA MER1_type 4 104 -74 203 176 0 0 chr17 7428264 7428298 -82076255 - MER5B DNA MER1_type -4 174 141 202 200 241 22 chr17 7428512 7428604 -82075949 + MIR SINE MIR 40 150 -112 500 247 9 92 chr17 7428624 7428851 -82075702 + L2 LINE L2 1422 1629 -1685 2356 243 171 47 chr17 7429089 7429552 -82075001 + L2 LINE L2 1699 2104 -1209 2388 92 0 0 chr17 7429552 7429857 -82074696 + AluY SINE Alu 1 305 -6 2356 243 171 47 chr17 7429857 7430731 -82073822 + L2 LINE L2 2104 3186 -127 1389 213 61 38 chr17 7430781 7431255 -82073298 - HAL1 LINE L1 -109 2398 1914 696 216 30 30 chr17 7431298 7431465 -82073088 - HAL1 LINE L1 -706 1801 1635 458 213 0 0 chr17 7431531 7431625 -82072928 + L1MA5 LINE L1 6207 6300 0 315 287 93 20 chr17 7431958 7432108 -82072445 - L1MC5 LINE L1 -152 7809 7649 267 31 0 0 chr17 7432154 7432186 -82072367 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2164 135 3 3 chr17 7432531 7432843 -82071710 - AluSx SINE Alu 0 312 1 1503 247 74 108 chr17 7432883 7433702 -82070851 - L1MEd LINE L1 -744 1746 904 953 100 20 0 chr17 7433702 7433852 -82070701 + L1MA7 LINE L1 6135 6287 -4 1503 247 74 108 chr17 7433852 7434438 -82070115 - L1MEd LINE L1 -1586 904 300 1230 186 138 63 chr17 7434528 7434862 -82069691 - MLT1A1 LTR MaLR -6 359 1 314 248 71 9 chr17 7434893 7435006 -82069547 - L1MEd LINE L1 -5981 138 19 282 296 41 0 chr17 7435728 7435826 -82068727 - MIR3 SINE MIR -39 169 68 650 161 206 7 chr17 7436643 7436798 -82067755 + MER53 DNA DNA 1 186 -3 2309 99 3 3 chr17 7436892 7437196 -82067357 - AluSx SINE Alu -7 305 2 6600 176 19 16 chr17 7437727 7439009 -82065544 + L1P4 LINE L1 3870 5155 -991 1160 139 0 0 chr17 7439005 7439185 -82065368 + L1P4 LINE L1 5603 5782 -383 * 962 103 0 0 chr17 7439185 7439311 -82065242 + AluSq/x SINE Alu 1 126 -187 192 316 18 44 chr17 7439506 7439620 -82064933 + MIR SINE MIR 151 261 -1 202 217 0 0 chr17 7440064 7440110 -82064443 + MIR SINE MIR 28 73 -135 273 252 34 75 chr17 7440695 7440842 -82063711 + MIR SINE MIR 12 152 -110 266 283 11 11 chr17 7441862 7441954 -82062599 - MIR SINE MIR -50 212 121 366 184 41 51 chr17 7441962 7442060 -82062493 + MIR SINE MIR 38 134 -128 2298 103 3 22 chr17 7443164 7443483 -82061070 + AluSq SINE Alu 1 313 0 294 261 11 11 chr17 7444548 7444640 -82059913 - MIR SINE MIR -50 212 121 338 165 47 47 chr17 7444661 7444746 -82059807 + MIR SINE MIR 50 134 -128 325 297 125 1 chr17 7445071 7445282 -82059271 + MIR SINE MIR 16 250 -12 2069 115 44 0 chr17 7445394 7445689 -82058864 + AluSq SINE Alu 3 310 -3 774 196 0 19 chr17 7445709 7445778 -82058775 - AluJb SINE Alu 0 361 292 1030 93 6 27 chr17 7445778 7445961 -82058592 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 774 196 0 19 chr17 7445961 7446098 -82058455 - AluJb SINE Alu -69 292 158 221 308 0 0 chr17 7446207 7446272 -82058281 - L2 LINE L2 -207 3065 3001 221 353 111 0 chr17 7446472 7446716 -82057837 - L2 LINE L2 -665 2649 2379 2142 123 13 3 chr17 7446736 7447037 -82057516 + AluSx SINE Alu 1 304 -8 335 88 0 32 chr17 7447441 7447504 -82057049 - FAM SINE Alu -4 171 116 2892 39 0 0 chr17 7447524 7447880 -82056673 - L1P LINE L1 -803 5343 4988 952 27 0 0 chr17 7447880 7447985 -82056568 + L1PA5 LINE L1 6040 6149 -5 486 280 83 0 chr17 7449191 7449359 -82055194 + MIR SINE MIR 10 191 -71 303 274 103 17 chr17 7449483 7449600 -82054953 + MIR SINE MIR 19 145 -63 276 299 47 0 chr17 7449660 7449767 -82054786 - MIR SINE MIR -123 139 28 2037 136 4 0 chr17 7450206 7450486 -82054067 + AluSx SINE Alu 1 281 -31 5736 65 22 12 chr17 7450486 7451243 -82053310 + MER4E LTR ERV1 2 766 0 38177 48 0 1 chr17 7451714 7456327 -82048226 - L1P LINE L1 -1535 4611 2 32 26 0 0 chr17 7456483 7456522 -82048031 + AT_rich Low_complexity Low_complexity 1 39 0 359 309 0 0 chr17 7456619 7456703 -82047850 + Cheshire DNA MER1_type 1 84 -2336 6024 131 45 38 chr17 7456704 7456936 -82047617 - L1MC2 LINE L1 -12 6332 6103 2200 130 10 0 chr17 7456936 7457244 -82047309 - AluSx SINE Alu -1 311 1 6024 131 45 38 chr17 7457244 7458149 -82046404 - L1MC2 LINE L1 -241 6103 5188 1046 248 90 3 chr17 7458152 7458442 -82046111 + Cheshire DNA MER1_type 77 391 -2029 2329 81 0 26 chr17 7458446 7458755 -82045798 - AluSq SINE Alu -12 301 1 225 0 0 0 chr17 7458938 7458963 -82045590 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 7459020 7459048 -82045505 + (TG)n Simple_repeat Simple_repeat 1 28 0 606 280 92 5 chr17 7459055 7459262 -82045291 - MIR SINE MIR -30 232 8 313 220 0 0 chr17 7459529 7459588 -82044965 - MER63 DNA MER1_type -315 745 687 2085 137 49 22 chr17 7459674 7460039 -82044514 + THE1C LTR MaLR 1 375 0 477 254 35 7 chr17 7460948 7461090 -82043463 - MIR SINE MIR -39 223 78 362 160 80 0 chr17 7461090 7461190 -82043363 + L1MC4 LINE L1 6982 7089 -953 496 231 162 48 chr17 7461219 7461265 -82043288 + L1ME3A LINE L1 5841 5880 -290 369 0 0 0 chr17 7461265 7461306 -82043247 + (CA)n Simple_repeat Simple_repeat 2 42 0 496 231 162 48 chr17 7461306 7461488 -82043065 + L1ME3A LINE L1 5880 6095 -75 498 184 10 19 chr17 7461495 7461598 -82042955 + MLT1E LTR MaLR 10 111 -482 6036 52 0 3 chr17 7462965 7463697 -82040856 - L1PA6 LINE L1 -5 6149 5420 22 0 0 0 chr17 7463731 7463753 -82040800 + AT_rich Low_complexity Low_complexity 1 22 0 2264 94 3 0 chr17 7463828 7464114 -82040439 + AluSp SINE Alu 5 291 -22 188 139 0 23 chr17 7464129 7464172 -82040381 + (TAA)n Simple_repeat Simple_repeat 3 44 0 288 248 256 15 chr17 7464185 7464318 -82040235 - MIR SINE MIR -19 243 79 583 240 69 6 chr17 7464423 7464598 -82039955 + MIR SINE MIR 63 248 -14 239 371 68 37 chr17 7464781 7465075 -82039478 - L2 LINE L2 -385 2929 2627 1422 212 156 47 chr17 7465272 7465702 -82038851 + MLT1J LTR MaLR 28 504 -7 2314 77 0 3 chr17 7466433 7466718 -82037835 - AluY SINE Alu -27 284 1 563 204 110 55 chr17 7466737 7466992 -82037561 - HAL1 LINE L1 -182 2325 2057 24 0 0 0 chr17 7467101 7467125 -82037428 + AT_rich Low_complexity Low_complexity 1 24 0 2260 207 53 14 chr17 7467323 7467873 -82036680 - HAL1 LINE L1 -542 1965 1395 2069 154 30 14 chr17 7467915 7468284 -82036269 + THE1C LTR MaLR 1 375 0 3322 117 190 3 chr17 7468287 7468861 -82035692 + THE1C-int LTR MaLR 4 684 -896 1801 166 3 3 chr17 7468873 7469157 -82035396 - AluJo SINE Alu -18 294 11 1579 238 107 46 chr17 7469157 7469809 -82034744 - HAL1 LINE L1 -1226 1281 590 391 306 65 36 chr17 7469914 7470162 -82034391 - HAL1 LINE L1 -2139 368 114 266 333 67 0 chr17 7470245 7470335 -82034218 - HAL1 LINE L1 -2396 111 16 2545 75 0 0 chr17 7470546 7470852 -82033701 - AluY SINE Alu -5 306 1 389 341 64 47 chr17 7471506 7472022 -82032531 - L2 LINE L2 -898 2416 1892 193 305 98 12 chr17 7472123 7472205 -82032348 + L2 LINE L2 3141 3229 -43 2544 253 70 36 chr17 7472212 7473348 -82031205 - L1ME3A LINE L1 0 6170 5074 477 0 0 0 chr17 7473348 7473401 -82031152 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2544 253 70 36 chr17 7473401 7473430 -82031123 - L1ME3A LINE L1 -1096 5074 5047 2293 95 0 0 chr17 7473430 7473725 -82030828 - AluY SINE Alu -16 295 1 2544 253 70 36 chr17 7473725 7473988 -82030565 - L1ME3A LINE L1 -1123 5047 4794 2467 75 3 7 chr17 7473988 7474293 -82030260 - AluSq SINE Alu -9 304 1 2544 253 70 36 chr17 7474293 7474577 -82029976 - L1ME3A LINE L1 -1376 4794 4393 2219 123 0 0 chr17 7474671 7474972 -82029581 - AluY SINE Alu -8 303 3 1026 265 52 34 chr17 7475124 7475449 -82029104 + MER102b DNA MER1_type 11 341 0 2127 115 7 0 chr17 7475600 7475886 -82028667 + AluSx SINE Alu 1 288 -24 816 192 0 0 chr17 7476045 7476175 -82028378 + MER2 DNA MER2_type 6 135 -210 329 131 16 0 chr17 7476177 7476238 -82028315 + CT-rich Low_complexity Low_complexity 2 63 0 701 216 0 8 chr17 7476242 7476376 -82028177 - FLAM_A SINE Alu 0 133 1 603 83 0 0 chr17 7476378 7476462 -82028091 + MER2 DNA MER2_type 127 210 -135 2087 203 115 12 chr17 7477182 7477694 -82026859 - L1ME3A LINE L1 -8 6162 5598 285 182 0 0 chr17 7477729 7477784 -82026769 + GA-rich Low_complexity Low_complexity 3 57 0 208 299 169 40 chr17 7477942 7478267 -82026286 - L3 LINE CR1 -162 1415 1049 293 301 96 15 chr17 7478694 7478830 -82025723 + MIR3 SINE MIR 29 175 -33 288 311 60 11 chr17 7479036 7479219 -82025334 + HAL1 LINE L1 1158 1349 -1158 828 175 19 31 chr17 7479278 7479438 -82025115 + MER2 DNA MER2_type 16 173 -172 188 46 0 161 chr17 7479477 7479564 -82024989 + (CAATA)n Simple_repeat Simple_repeat 2 74 0 369 250 0 0 chr17 7479660 7479736 -82024817 + MER2 DNA MER2_type 269 344 -1 421 315 160 18 chr17 7479841 7480184 -82024369 + HAL1 LINE L1 1526 1917 -590 601 183 76 8 chr17 7480286 7480417 -82024136 + FRAM SINE Alu 11 150 -26 22 35 0 0 chr17 7480417 7480446 -82024107 + AT_rich Low_complexity Low_complexity 1 29 0 869 154 0 0 chr17 7480486 7480616 -82023937 + FLAM_C SINE Alu 1 130 -3 263 310 70 20 chr17 7480866 7480966 -82023587 - L2 LINE L2 0 3272 3168 982 223 45 67 chr17 7480971 7481400 -82023153 + L1MC4a LINE L1 5593 6016 -105 446 296 133 26 chr17 7482689 7482915 -82021638 - MIR SINE MIR -4 258 9 791 218 19 28 chr17 7483563 7483774 -82020779 + L1MC4a LINE L1 5673 5881 -1927 278 53 0 26 chr17 7483784 7483822 -82020731 - FRAM/FAM SINE Alu -99 67 31 250 271 181 45 chr17 7483863 7484084 -82020469 + L1MC4a LINE L1 5918 6168 -1640 27 0 0 0 chr17 7484090 7484117 -82020436 + AT_rich Low_complexity Low_complexity 1 27 0 1432 153 12 81 chr17 7484660 7484980 -82019573 - AluJo SINE Alu -14 298 1 448 242 67 17 chr17 7484980 7485100 -82019453 + MIR SINE MIR 77 202 -60 1509 117 36 97 chr17 7485100 7485320 -82019233 - THE1C LTR MaLR 0 375 178 2408 96 0 0 chr17 7485320 7485621 -82018932 + AluSx SINE Alu 1 301 -11 1509 117 36 97 chr17 7485621 7485708 -82018845 - THE1C LTR MaLR -197 178 87 22 0 0 0 chr17 7486034 7486056 -82018497 + AT_rich Low_complexity Low_complexity 1 22 0 782 232 16 20 chr17 7486155 7486401 -82018152 - L1ME LINE L1 -5054 1016 772 1680 180 7 7 chr17 7486714 7487003 -82017550 - AluJb SINE Alu -23 289 1 22 35 0 0 chr17 7487389 7487418 -82017135 + AT_rich Low_complexity Low_complexity 1 29 0 192 291 18 0 chr17 7487449 7487504 -82017049 + L2 LINE L2 3249 3304 -9 2328 90 3 0 chr17 7487896 7488206 -82016347 + AluY SINE Alu 1 311 0 1314 249 28 82 chr17 7489162 7489732 -82014821 - MER34 LTR ERV1 -3 539 1 22 0 0 0 chr17 7490018 7490040 -82014513 + AT_rich Low_complexity Low_complexity 1 22 0 620 268 41 36 chr17 7490600 7490794 -82013759 - MIR SINE MIR -48 214 20 189 263 0 0 chr17 7490801 7490839 -82013714 - MIR SINE MIR -129 79 42 411 274 29 0 chr17 7491226 7491328 -82013225 - MIR SINE MIR 0 262 158 959 274 74 79 chr17 7491502 7492327 -82012226 + HAL1 LINE L1 2 1019 -1488 7214 53 10 0 chr17 7492333 7493671 -82010882 - L1PA7 LINE L1 0 6154 4801 2034 77 50 0 chr17 7493671 7493932 -82010621 + AluY SINE Alu 21 294 -17 13249 103 4 28 chr17 7493932 7496390 -82008163 - L1P3 LINE L1 -4009 2452 7 2410 145 36 19 chr17 7496892 7497089 -82007464 + MSTA LTR MaLR 1 193 -235 2719 144 44 2 chr17 7497089 7497500 -82007053 - MSTA LTR MaLR 0 428 1 2410 145 36 19 chr17 7497500 7497723 -82006830 + MSTA LTR MaLR 193 428 0 558 295 131 52 chr17 7498845 7498960 -82005593 - HAL1 LINE L1 -1709 798 693 2179 78 27 10 chr17 7498960 7499256 -82005297 - AluY SINE Alu -10 301 1 558 295 131 52 chr17 7499256 7499638 -82004915 - HAL1 LINE L1 -1814 693 262 2003 176 40 62 chr17 7499734 7499814 -82004739 - MSTB LTR MaLR 0 426 346 2064 87 4 0 chr17 7499814 7500080 -82004473 + AluSc SINE Alu 35 301 -8 2003 176 40 62 chr17 7500080 7500419 -82004134 - MSTB LTR MaLR -80 346 16 24 0 0 0 chr17 7500434 7500458 -82004095 + AT_rich Low_complexity Low_complexity 1 24 0 838 275 48 34 chr17 7500469 7500883 -82003670 + L1PBa LINE L1 135 554 -6309 883 226 43 4 chr17 7500909 7501139 -82003414 + L1PBa LINE L1 612 850 -6013 265 214 18 0 chr17 7501368 7501424 -82003129 - MER89-int LTR ERV1 -2166 2481 2425 692 147 121 17 chr17 7501437 7501553 -82003000 - FLAM_C SINE Alu -14 129 2 481 211 0 90 chr17 7502045 7502178 -82002375 - MER89-int LTR ERV1 -4076 860 740 390 304 52 55 chr17 7502622 7502911 -82001642 - MER89-int LTR ERV1 -3156 3645 3358 4151 133 44 5 chr17 7503613 7504250 -82000303 - L1PA15 LINE L1 -22 6143 5482 668 280 92 5 chr17 7504644 7504851 -81999702 + MIR SINE MIR 8 232 -30 252 0 0 0 chr17 7504858 7504886 -81999667 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 0 0 0 chr17 7504943 7504968 -81999585 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2614 24 7 0 chr17 7505151 7505447 -81999106 + AluY SINE Alu 1 298 -13 1152 151 5 11 chr17 7505452 7505638 -81998915 - Tigger3(Golem) DNA MER2_type -284 2745 2561 759 115 10 0 chr17 7505639 7505743 -81998810 + AluSg SINE Alu 2 106 -204 16234 215 27 29 chr17 7505843 7509624 -81994929 - L1PA13 LINE L1 -826 5971 2185 942 109 0 51 chr17 7509624 7509761 -81994792 - FLAM_C SINE Alu -3 130 1 16234 215 27 29 chr17 7509761 7510057 -81994496 - L1PA13 LINE L1 -4612 2185 1890 1738 123 88 0 chr17 7510057 7510206 -81994347 - AluSg1 SINE Alu -24 285 151 360 0 0 0 chr17 7510206 7510246 -81994307 + (TG)n Simple_repeat Simple_repeat 2 41 0 1738 123 88 0 chr17 7510246 7510356 -81994197 - AluSg1 SINE Alu -158 151 3 16234 215 27 29 chr17 7510356 7511029 -81993524 - L1PA13 LINE L1 -4907 1890 1180 1023 297 58 52 chr17 7511008 7511530 -81993023 - L1PA13 LINE L1 -5818 969 445 * 796 203 0 7 chr17 7511527 7511680 -81992873 - L1PA13 LINE L1 -6632 155 4 * 1370 228 69 64 chr17 7511777 7512359 -81992194 + LTR24B LTR ERV1 1 635 0 1128 262 46 40 chr17 7512359 7512959 -81991594 + LTR24B-int LTR ERV1 2 745 -4378 180 179 0 0 chr17 7513268 7513307 -81991246 + CT-rich Low_complexity Low_complexity 5 43 0 332 330 11 34 chr17 7513973 7514149 -81990404 + MER89-int LTR ERV1 3480 3651 -3440 1786 144 17 10 chr17 7514237 7514535 -81990018 - AluJo SINE Alu -12 300 1 328 277 43 11 chr17 7514605 7514699 -81989854 + MER89-int LTR ERV1 2538 2634 -4167 2491 4 0 15 chr17 7514866 7515140 -81989413 + AluYb8 SINE Alu 20 289 -29 2054 96 0 31 chr17 7515383 7515674 -81988879 + AluSq SINE Alu 1 282 -31 180 0 0 0 chr17 7515675 7515695 -81988858 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 205 182 0 0 chr17 7516386 7516419 -81988134 + polypurine Low_complexity Low_complexity 1 33 0 474 118 0 0 chr17 7516842 7516910 -81987643 + LTR24B LTR ERV1 501 568 -8 2333 92 0 3 chr17 7517127 7517422 -81987131 - AluSc SINE Alu -15 294 1 3733 199 106 15 chr17 7517422 7518229 -81986324 - L1MC2 LINE L1 -13 6331 5428 1693 167 23 13 chr17 7518229 7518535 -81986018 - AluJb SINE Alu -3 309 1 3733 199 106 15 chr17 7518535 7518651 -81985902 - L1MC2 LINE L1 -916 5428 5324 2380 92 0 0 chr17 7518651 7518956 -81985597 - AluSx SINE Alu -7 305 1 1069 125 60 50 chr17 7518981 7519181 -81985372 - L1MB2 LINE L1 -2 6169 5968 840 172 27 59 chr17 7519181 7519367 -81985186 - LTR57 LTR ERVL 0 411 232 2374 71 0 7 chr17 7519411 7519706 -81984847 - AluY SINE Alu -18 293 1 1006 92 48 121 chr17 7519772 7519979 -81984574 - L1MA2 LINE L1 -18 6286 6095 2489 65 0 10 chr17 7519992 7520301 -81984252 - AluY SINE Alu -5 306 1 1409 129 37 0 chr17 7520301 7520518 -81984035 - LTR57 LTR ERVL -186 225 1 2423 106 0 0 chr17 7522101 7522413 -81982140 + AluSx SINE Alu 1 312 0 221 305 98 12 chr17 7522782 7522864 -81981689 + L2 LINE L2 3141 3229 -43 404 72 9 0 chr17 7522902 7522968 -81981585 - MER51A LTR ERV1 -308 69 1 249 278 130 17 chr17 7523000 7523115 -81981438 + L1M4 LINE L1 4902 5029 -1117 25 31 0 0 chr17 7523303 7523335 -81981218 + AT_rich Low_complexity Low_complexity 1 32 0 1513 108 33 21 chr17 7523532 7523879 -81980674 + LTR46 LTR ERV1 1 404 -56 354 23 0 0 chr17 7523883 7523926 -81980627 + (TC)n Simple_repeat Simple_repeat 2 44 0 2366 94 3 0 chr17 7523929 7524236 -81980317 - AluSp SINE Alu -5 308 1 564 82 0 0 chr17 7524245 7524317 -81980236 - MER4E LTR ERV1 -282 497 426 1914 148 26 58 chr17 7524317 7524695 -81979858 + MER66B LTR ERV1 1 366 -120 1630 112 13 0 chr17 7524701 7524925 -81979628 + AluSg/x SINE Alu 76 302 -8 1681 171 27 0 chr17 7524932 7525224 -81979329 + MER4D LTR ERV1 604 903 0 337 123 62 0 chr17 7525629 7525694 -81978859 + L1MC2 LINE L1 6267 6335 -9 8268 21 0 0 chr17 7526127 7527534 -81977019 + L1PA3 LINE L1 4752 6155 0 24 32 0 0 chr17 7527934 7527965 -81976588 + AT_rich Low_complexity Low_complexity 1 31 0 1336 189 80 121 chr17 7528605 7528677 -81975876 - MSTD LTR MaLR 0 396 323 2229 92 3 0 chr17 7528677 7528959 -81975594 + AluY SINE Alu 2 284 -27 1336 189 80 121 chr17 7528959 7529299 -81975254 - MSTD LTR MaLR -73 323 1 21 36 0 0 chr17 7529987 7530015 -81974538 + AT_rich Low_complexity Low_complexity 1 28 0 1509 159 90 34 chr17 7530164 7530594 -81973959 + LTR54 LTR ERV1 1 493 -5 229 177 106 99 chr17 7530700 7530841 -81973712 - L1ME4a LINE L1 -2 6119 5978 1175 276 43 57 chr17 7530993 7531486 -81973067 - LTR33A LTR ERVL 0 523 38 806 199 17 6 chr17 7531532 7531708 -81972845 + L1MC4 LINE L1 7438 7615 -427 595 138 0 47 chr17 7531717 7531963 -81972590 + AluJ SINE Alu 11 294 -18 1090 256 73 42 chr17 7531964 7532348 -81972205 + L1MC4 LINE L1 7620 8019 -23 2066 127 0 3 chr17 7532348 7532640 -81971913 - AluSg SINE Alu -17 293 3 1090 256 73 42 chr17 7532640 7532665 -81971888 + L1MC4 LINE L1 8019 8042 0 631 270 90 69 chr17 7532880 7533115 -81971438 + MLT1H LTR MaLR 1 230 -365 5794 45 1 1 chr17 7533115 7533781 -81970772 + L1PA7 LINE L1 5483 6148 -6 631 270 90 69 chr17 7533781 7534004 -81970549 + MLT1H LTR MaLR 230 447 -148 2446 42 19 13 chr17 7534004 7534313 -81970240 - AluY SINE Alu 0 311 1 631 270 90 69 chr17 7534313 7534356 -81970197 + MLT1H LTR MaLR 447 488 -107 2420 138 14 6 chr17 7534356 7534719 -81969834 + MER47A DNA MER2_type 1 366 0 631 270 90 69 chr17 7534719 7534736 -81969817 + MLT1H LTR MaLR 488 588 -7 1731 161 22 75 chr17 7534860 7535276 -81969277 - L1 LINE L1 -831 6734 6341 * 8231 195 38 118 chr17 7535267 7535471 -81969082 - L1 LINE L1 -1433 6132 5913 2585 192 16 43 chr17 7535471 7535728 -81968825 - MER70A LTR ERVL 0 472 233 1886 122 79 0 chr17 7535728 7536007 -81968546 - AluSg SINE Alu -9 301 1 2585 192 16 43 chr17 7536007 7536234 -81968319 - MER70A LTR ERVL -239 233 1 8231 195 38 118 chr17 7536234 7537702 -81966851 - L1 LINE L1 -1652 5913 4329 189 0 0 0 chr17 7537702 7537723 -81966830 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8231 195 38 118 chr17 7537723 7538376 -81966177 - L1 LINE L1 -3236 4329 3625 2242 90 0 0 chr17 7538376 7538675 -81965878 + AluSg1 SINE Alu 1 299 -10 8231 195 38 118 chr17 7538675 7539663 -81964890 - L1 LINE L1 -3940 3625 2719 270 0 0 0 chr17 7539665 7539695 -81964858 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7341 11 2 0 chr17 7539695 7540511 -81964042 - L1PA3 LINE L1 -10 6145 5328 496 213 25 0 chr17 7540484 7540606 -81963947 - L1M3c LINE L1 -4555 1586 1462 * 560 306 117 20 chr17 7540711 7540959 -81963594 - L1M3c LINE L1 -5546 595 324 1564 250 32 5 chr17 7541033 7541409 -81963144 - L1M3c LINE L1 -5755 386 1 212 404 14 28 chr17 7541409 7541627 -81962926 - L2 LINE L2 -249 3023 2809 300 297 50 30 chr17 7541883 7541984 -81962569 - L2 LINE L2 -4 3309 3207 487 212 63 112 chr17 7542007 7542248 -81962305 - L1MC5 LINE L1 -126 7916 7665 1824 115 7 7 chr17 7542248 7542527 -81962026 + AluSx SINE Alu 1 279 -33 279 54 0 0 chr17 7542527 7542564 -81961989 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 487 212 63 112 chr17 7542564 7542660 -81961893 - L1MC5 LINE L1 -375 7667 7505 663 249 39 11 chr17 7542783 7542964 -81961589 - L1ME2 LINE L1 -158 6006 5821 1371 104 0 0 chr17 7542981 7543163 -81961390 + AluSg SINE Alu 1 182 -128 2074 97 3 23 chr17 7543171 7543480 -81961073 + AluSx SINE Alu 1 303 -9 277 83 21 0 chr17 7543480 7543528 -81961025 + L1PA16 LINE L1 6118 6166 0 1975 120 0 10 chr17 7543543 7543869 -81960684 + AluSx SINE Alu 5 312 0 370 345 117 19 chr17 7544449 7544655 -81959898 + L1ME LINE L1 598 823 -5573 382 234 301 13 chr17 7544684 7545059 -81959494 + L1ME LINE L1 776 1205 -5201 4133 243 52 37 chr17 7545080 7547407 -81957146 + L1PBa LINE L1 3 1644 -5219 1577 162 2 29 chr17 7547404 7547691 -81956862 + L1PB3 LINE L1 5889 6161 -5 * 1363 262 52 15 chr17 7547696 7548158 -81956395 + L1ME LINE L1 1217 1695 -4711 6094 78 29 19 chr17 7548158 7549062 -81955491 + L1PB1 LINE L1 5237 6148 -3 1376 194 9 34 chr17 7549072 7549422 -81955131 + L1ME LINE L1 1691 2031 -4375 180 0 0 0 chr17 7549659 7549679 -81954874 + (CA)n Simple_repeat Simple_repeat 2 21 0 187 380 105 37 chr17 7549803 7550127 -81954426 + L2 LINE L2 2872 3217 -55 487 231 46 0 chr17 7550154 7550262 -81954291 - L2 LINE L2 -2 3311 3199 183 304 0 0 chr17 7550272 7550318 -81954235 + L2 LINE L2 3219 3264 -8 356 255 114 135 chr17 7550850 7551183 -81953370 + L2 LINE L2 2943 3268 -4 1540 168 0 31 chr17 7551655 7551941 -81952612 + AluJo SINE Alu 6 282 -30 262 268 18 116 chr17 7551962 7552074 -81952479 - L2 LINE L2 -14 3258 3158 270 0 0 0 chr17 7552192 7552222 -81952331 + (TG)n Simple_repeat Simple_repeat 1 30 0 751 149 9 0 chr17 7552223 7552337 -81952216 - FLAM_C SINE Alu -28 115 1 2147 104 7 10 chr17 7553180 7553315 -81951238 + AluSx SINE Alu 1 135 -177 2249 95 0 7 chr17 7553315 7553621 -81950932 + AluSg SINE Alu 1 304 -6 2147 104 7 10 chr17 7553621 7553794 -81950759 + AluSx SINE Alu 135 308 -4 2214 76 0 3 chr17 7554450 7554741 -81949812 - AluY SINE Alu -21 290 1 336 67 0 0 chr17 7554822 7554867 -81949686 - MADE1 DNA Mariner -35 45 1 2769 219 73 54 chr17 7555610 7556291 -81948262 - HAL1 LINE L1 -604 1903 1196 2481 55 0 7 chr17 7556291 7556600 -81947953 - AluY SINE Alu -4 307 1 2769 219 73 54 chr17 7556600 7556914 -81947639 - HAL1 LINE L1 -1311 1196 889 2620 146 34 0 chr17 7557033 7557451 -81947102 + MSTB1 LTR MaLR 1 432 0 389 287 0 10 chr17 7557452 7557553 -81947000 + MIR SINE MIR 101 200 -62 1120 272 85 19 chr17 7557690 7558077 -81946476 + MLT1K LTR MaLR 108 588 0 851 295 16 28 chr17 7558173 7558536 -81946017 - L1ME LINE L1 -343 5778 5420 220 277 48 48 chr17 7558696 7558779 -81945774 + MIR SINE MIR 25 107 -101 379 248 48 0 chr17 7558960 7559085 -81945468 + L1ME1 LINE L1 6035 6165 -1 1382 76 0 0 chr17 7559091 7559263 -81945290 + AluY SINE Alu 1 172 -139 1729 192 124 28 chr17 7559366 7559628 -81944925 - L1MDa LINE L1 -4791 1749 1514 195 42 0 0 chr17 7559628 7559652 -81944901 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1729 192 124 28 chr17 7559652 7559890 -81944663 - L1MDa LINE L1 -5026 1514 1201 2049 136 0 7 chr17 7559891 7560200 -81944353 - AluSx SINE Alu -5 307 1 1912 240 27 27 chr17 7560219 7560665 -81943888 - L1MDa LINE L1 -6061 479 34 2424 169 62 102 chr17 7560666 7561489 -81943064 - L1ME1 LINE L1 -341 5825 5065 1963 88 0 4 chr17 7561489 7561750 -81942803 + AluSg SINE Alu 37 296 -14 2424 169 62 102 chr17 7561750 7562107 -81942446 - L1ME1 LINE L1 -1101 5065 4695 611 217 35 0 chr17 7562208 7562323 -81942230 - MER44D DNA MER2_type -220 389 1 407 225 75 116 chr17 7562331 7562470 -81942083 - HAL1 LINE L1 -2223 284 162 2291 89 3 3 chr17 7562470 7562783 -81941770 - AluSp SINE Alu 0 313 1 407 225 75 116 chr17 7562783 7562936 -81941617 - HAL1 LINE L1 -2345 162 4 329 278 95 65 chr17 7562910 7563178 -81941375 - L1MEd LINE L1 -4901 1235 945 * 2370 64 3 0 chr17 7563178 7563474 -81941079 - AluY SINE Alu -14 297 1 329 278 95 65 chr17 7563474 7563680 -81940873 - L1MEd LINE L1 -5191 945 747 26 30 0 0 chr17 7563826 7563859 -81940694 + AT_rich Low_complexity Low_complexity 1 33 0 461 104 0 0 chr17 7563860 7563927 -81940626 - L1PA10 LINE L1 -13 6155 6089 4451 91 15 7 chr17 7563927 7564540 -81940013 + L1PA10 LINE L1 5459 6076 -92 2256 73 7 3 chr17 7564541 7564844 -81939709 - AluY SINE Alu -7 304 1 993 197 126 74 chr17 7565077 7565426 -81939127 - MER66A LTR ERV1 -40 438 66 2129 113 7 0 chr17 7565426 7565736 -81938817 - AluSx SINE Alu 0 312 1 993 197 126 74 chr17 7565736 7565776 -81938777 - MER66A LTR ERV1 -412 66 29 25 0 0 0 chr17 7565854 7565879 -81938674 + AT_rich Low_complexity Low_complexity 1 25 0 1926 148 3 3 chr17 7565972 7566282 -81938271 - AluJo SINE Alu -2 310 1 276 232 0 29 chr17 7566529 7566598 -81937955 - MIR SINE MIR -8 254 188 1152 225 47 69 chr17 7566820 7567215 -81937338 + MLT1K LTR MaLR 165 586 -29 2027 123 3 7 chr17 7567245 7567554 -81936999 - AluSq SINE Alu 0 313 6 254 246 29 0 chr17 7567561 7567630 -81936923 + MLT1K LTR MaLR 514 584 -4 2295 77 3 22 chr17 7567814 7568125 -81936428 - AluSp SINE Alu -8 305 1 284 0 28 0 chr17 7568379 7568415 -81936138 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2354 152 44 12 chr17 7568467 7568875 -81935678 - MSTB LTR MaLR -4 422 2 2258 89 0 0 chr17 7569035 7569326 -81935227 - AluSx SINE Alu -21 291 1 424 110 0 0 chr17 7569648 7569721 -81934832 - L1MC3 LINE L1 -1 7784 7712 1881 82 74 0 chr17 7570407 7570677 -81933876 - AluSx SINE Alu -22 290 1 800 278 133 44 chr17 7570679 7571121 -81933432 - HAL1 LINE L1 -1656 851 357 2131 110 0 3 chr17 7571121 7571429 -81933124 - AluSq SINE Alu -6 307 1 800 278 133 44 chr17 7571429 7571489 -81933064 - HAL1 LINE L1 -2150 357 304 331 165 44 77 chr17 7571501 7571592 -81932961 - Tigger7 DNA MER2_type 0 2491 2404 475 171 0 0 chr17 7571729 7571799 -81932754 - AluJ/FLAM SINE Alu -240 72 3 216 0 0 0 chr17 7571812 7571836 -81932717 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1736 98 0 0 chr17 7571836 7572072 -81932481 - AluSx SINE Alu -32 280 45 5352 103 31 16 chr17 7572076 7572472 -81932081 - Tigger1 DNA MER2_type -948 1470 1081 2151 114 0 0 chr17 7572472 7572771 -81931782 - AluSg SINE Alu -10 300 2 5352 103 31 16 chr17 7572771 7573187 -81931366 - Tigger1 DNA MER2_type -1337 1081 646 1269 108 15 0 chr17 7573187 7573382 -81931171 - AluSc SINE Alu -13 296 99 534 161 0 76 chr17 7573493 7573611 -81930942 + AluJo SINE Alu 112 220 -92 225 167 136 0 chr17 7573653 7573719 -81930834 + MIR SINE MIR 127 201 -61 267 31 0 0 chr17 7573743 7573775 -81930778 + (CA)n Simple_repeat Simple_repeat 1 32 0 601 212 8 0 chr17 7574212 7574353 -81930200 + FLAM_A SINE Alu 1 142 0 902 169 17 11 chr17 7574398 7574576 -81929977 - MER96B DNA MER1_type? -237 180 2 2193 117 0 0 chr17 7575053 7575362 -81929191 + AluSx SINE Alu 1 309 -3 373 359 57 31 chr17 7575426 7575744 -81928809 + L2 LINE L2 1217 1542 -1772 625 184 58 89 chr17 7575744 7575793 -81928760 - MER106A DNA MER1_type -3 233 184 2229 95 3 7 chr17 7575793 7576099 -81928454 - AluSp SINE Alu -8 305 1 625 184 58 89 chr17 7576099 7576239 -81928314 - MER106A DNA MER1_type -52 184 50 665 149 0 0 chr17 7576249 7576343 -81928210 + 5S rRNA rRNA 1 94 -27 1119 149 86 0 chr17 7576730 7576951 -81927602 - L1MA9 LINE L1 0 6312 6073 1200 206 26 90 chr17 7576951 7577020 -81927533 + MSTB2 LTR MaLR 7 79 -378 1870 142 7 3 chr17 7577020 7577322 -81927231 + AluJb SINE Alu 9 311 -1 1200 206 26 90 chr17 7577322 7577597 -81926956 + MSTB2 LTR MaLR 79 329 -128 2168 88 3 3 chr17 7577698 7577994 -81926559 - AluSq SINE Alu -17 296 1 1386 157 52 21 chr17 7578281 7578294 -81926259 - AluJb SINE Alu -17 295 284 459 63 0 0 chr17 7578294 7578357 -81926196 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1386 157 52 21 chr17 7578357 7578629 -81925924 - AluJb SINE Alu -28 284 1 288 345 54 20 chr17 7578951 7579176 -81925377 + L2 LINE L2 2745 2969 -303 1028 189 4 88 chr17 7579587 7579652 -81924901 + MIR SINE MIR 6 75 -187 3934 180 40 48 chr17 7579652 7580614 -81923939 - LTR13 LTR ERVK 0 954 1 1028 189 4 88 chr17 7580614 7580786 -81923767 + MIR SINE MIR 75 223 -39 1821 151 0 19 chr17 7580823 7581135 -81923418 - AluSx SINE Alu -6 306 1 880 125 21 0 chr17 7581431 7581575 -81922978 + AluSp/q SINE Alu 163 309 -4 1125 92 12 0 chr17 7581575 7581738 -81922815 + Tigger1 DNA MER2_type 1584 1748 -670 1764 101 0 0 chr17 7581738 7581975 -81922578 + AluSq SINE Alu 1 237 -76 1913 126 0 26 chr17 7582246 7582555 -81921998 + AluJb SINE Alu 1 301 -11 2155 104 0 7 chr17 7582592 7582890 -81921663 + AluSx SINE Alu 1 296 -16 249 224 13 40 chr17 7582892 7582968 -81921585 + MER67C LTR ERV1 28 101 -609 2156 140 25 6 chr17 7583068 7583082 -81921471 + MER67C LTR ERV1 347 359 -351 2252 104 0 0 chr17 7583082 7583379 -81921174 + AluSx SINE Alu 1 297 -15 2156 140 25 6 chr17 7583379 7583721 -81920832 + MER67C LTR ERV1 359 710 0 210 282 84 0 chr17 7583883 7583954 -81920599 - MIR SINE MIR -1 261 185 207 0 0 0 chr17 7584344 7584367 -81920186 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2377 69 0 10 chr17 7587133 7587437 -81917116 - AluY SINE Alu -10 301 1 203 208 19 38 chr17 7588192 7588245 -81916308 + C-rich Low_complexity Low_complexity 2 53 0 225 310 129 9 chr17 7589664 7589780 -81914773 + MIR3 SINE MIR 36 165 -43 981 216 16 0 chr17 7590277 7590462 -81914091 - MER5A DNA MER1_type 0 189 2 1948 152 0 13 chr17 7590526 7590828 -81913725 - AluSx SINE Alu -14 298 1 180 361 46 37 chr17 7591055 7591163 -81913390 + L2 LINE L2 3184 3292 -21 843 174 0 0 chr17 7592084 7592216 -81912337 + FLAM_C SINE Alu 2 133 0 1755 182 0 3 chr17 7593010 7593306 -81911247 - AluJo SINE Alu -17 295 1 449 334 87 63 chr17 7593613 7594107 -81910446 - L1M4 LINE L1 -2640 3506 3001 * 455 349 66 52 chr17 7593656 7594151 -81910402 + L1M4c LINE L1 903 1970 -4 380 326 60 22 chr17 7594481 7594665 -81909888 - MIR SINE MIR -44 218 28 2193 73 0 0 chr17 7595051 7595326 -81909227 - AluSg SINE Alu -4 306 32 21 0 0 0 chr17 7595633 7595654 -81908899 + GC_rich Low_complexity Low_complexity 1 21 0 1344 207 74 45 chr17 7597150 7597183 -81907370 - MLT1A1 LTR MaLR -2 363 332 2388 73 3 0 chr17 7597183 7597483 -81907070 + AluSg SINE Alu 1 301 -9 1344 207 74 45 chr17 7597483 7597802 -81906751 - MLT1A1 LTR MaLR -33 332 1 321 339 54 0 chr17 7597920 7598032 -81906521 + MIR SINE MIR 30 147 -61 743 299 132 16 chr17 7598034 7598073 -81906480 - L1MEd LINE L1 -1306 1184 1151 1935 109 8 0 chr17 7598073 7598338 -81906215 + AluSx SINE Alu 29 295 -17 743 299 132 16 chr17 7598338 7598626 -81905927 - L1MEd LINE L1 -1339 1151 827 1023 124 103 5 chr17 7598635 7598829 -81905724 - AluSg/x SINE Alu -15 297 85 455 89 0 0 chr17 7598948 7599004 -81905549 - AluJ/FLAM SINE Alu -247 65 10 2379 64 0 0 chr17 7599024 7599320 -81905233 - AluY SINE Alu -15 296 1 324 274 234 11 chr17 7599402 7599577 -81904976 - MIR SINE MIR 0 262 49 855 220 117 47 chr17 7600534 7600834 -81903719 - MER58B DNA MER1_type -2 339 19 1732 126 15 4 chr17 7601414 7601683 -81902870 - AluSx SINE Alu 0 312 41 1825 54 0 0 chr17 7602882 7603105 -81901448 + AluSg/x SINE Alu 77 299 -13 647 246 110 18 chr17 7603845 7604073 -81900480 + MIR SINE MIR 14 262 0 26 101 0 0 chr17 7604916 7605005 -81899548 + GC_rich Low_complexity Low_complexity 1 89 0 297 0 0 0 chr17 7614664 7614697 -81889856 + (CAG)n Simple_repeat Simple_repeat 1 33 0 760 212 53 6 chr17 7615250 7615420 -81889133 + MER5B DNA MER1_type 1 178 0 1192 173 0 20 chr17 7615518 7615720 -81888833 + AluJo SINE Alu 1 198 -114 237 289 56 22 chr17 7619865 7619955 -81884598 + MIR3 SINE MIR 106 198 -10 1765 183 112 23 chr17 7619955 7620250 -81884303 - MSTC LTR MaLR 0 428 88 2293 78 7 7 chr17 7620250 7620546 -81884007 - AluY SINE Alu -15 296 1 1765 183 112 23 chr17 7620546 7620643 -81883910 - MSTC LTR MaLR -340 88 1 5379 206 92 106 chr17 7620643 7620933 -81883620 - MSTC-int LTR MaLR 0 1735 1442 2257 82 7 0 chr17 7620933 7621227 -81883326 - AluSg SINE Alu -14 296 1 5379 206 92 106 chr17 7621227 7621828 -81882725 - MSTC-int LTR MaLR -293 1442 834 333 0 0 0 chr17 7621828 7621865 -81882688 + (CA)n Simple_repeat Simple_repeat 2 38 0 5379 206 92 106 chr17 7621865 7622504 -81882049 - MSTC-int LTR MaLR -901 834 230 2326 79 3 0 chr17 7622504 7622808 -81881745 - AluSg SINE Alu -5 305 1 5379 206 92 106 chr17 7622808 7623034 -81881519 - MSTC-int LTR MaLR -1505 230 2 856 155 83 26 chr17 7623044 7623237 -81881316 - MSTC LTR MaLR -4 424 221 265 140 0 53 chr17 7623383 7623440 -81881113 - MSTC LTR MaLR -250 178 125 586 152 120 32 chr17 7623440 7623598 -81880955 - MSTC LTR MaLR -256 172 1 2227 109 0 6 chr17 7623673 7623986 -81880567 + AluSq SINE Alu 1 311 -2 467 329 52 36 chr17 7624065 7624256 -81880297 - MIR SINE MIR -6 256 58 2142 95 0 0 chr17 7624256 7624570 -81879983 + AluSx SINE Alu 1 314 0 467 329 52 36 chr17 7624570 7624626 -81879927 - MIR SINE MIR -204 58 4 2471 43 27 0 chr17 7626821 7627122 -81877431 + AluSg SINE Alu 1 309 -1 2519 53 0 0 chr17 7627205 7627507 -81877046 + AluY SINE Alu 1 302 -9 277 241 196 38 chr17 7627524 7627657 -81876896 - MIR SINE MIR -93 169 16 * 455 319 80 5 chr17 7627638 7627826 -81876727 - MIR SINE MIR -38 224 23 347 294 39 10 chr17 7628690 7628792 -81875761 + MER91C DNA MER1_type 36 140 0 1327 39 0 0 chr17 7629084 7629239 -81875314 + AluY SINE Alu 147 301 -10 2087 80 0 104 chr17 7629921 7630259 -81874294 - AluSg SINE Alu -7 303 1 2342 97 0 0 chr17 7630666 7630976 -81873577 + AluSg SINE Alu 1 310 0 1996 92 14 11 chr17 7634123 7634449 -81870104 + AluSx SINE Alu 1 327 0 639 243 26 30 chr17 7634589 7634856 -81869697 - LTR13 LTR ERVK -741 266 1 777 157 6 81 chr17 7634856 7635028 -81869525 + MIR SINE MIR 65 223 -39 2053 140 0 9 chr17 7635062 7635377 -81869176 - AluSx SINE Alu 0 312 1 2359 81 3 0 chr17 7635684 7635991 -81868562 + AluSp SINE Alu 1 308 -5 814 296 42 61 chr17 7636024 7636524 -81868029 - L2 LINE L2 0 3272 2778 2366 70 0 0 chr17 7636711 7637051 -81867502 - AluY SINE Alu 0 311 1 185 158 0 53 chr17 7637359 7637397 -81867156 - L3 LINE CR1 -656 921 886 2370 86 3 0 chr17 7637617 7637908 -81866645 - AluSp SINE Alu -21 292 1 1412 122 0 0 chr17 7638416 7638605 -81865948 - AluSg/x SINE Alu -1 311 123 2368 84 0 0 chr17 7638846 7639157 -81865396 - AluSx SINE Alu 0 311 1 407 314 0 0 chr17 7639216 7639337 -81865216 - LTR67 LTR ERVL -8 549 429 226 266 0 16 chr17 7639505 7639569 -81864984 - LTR67 LTR ERVL -386 171 109 254 215 94 111 chr17 7639681 7639832 -81864721 - L1M4 LINE L1 -2976 3170 3024 1588 110 0 5 chr17 7639832 7640069 -81864484 + AluSq SINE Alu 78 313 0 254 215 94 111 chr17 7640069 7640214 -81864339 - L1M4 LINE L1 -3122 3024 2878 2304 95 0 3 chr17 7640621 7640915 -81863638 + AluSx SINE Alu 2 294 -18 242 280 53 27 chr17 7640983 7641058 -81863495 - MIR SINE MIR -137 125 49 494 122 52 17 chr17 7642346 7642518 -81862035 + (CA)n Simple_repeat Simple_repeat 2 179 0 295 279 132 25 chr17 7642679 7642876 -81861677 + L1MC5 LINE L1 7268 7485 -476 2170 119 24 3 chr17 7642882 7643177 -81861376 + AluJb SINE Alu 1 301 -11 264 204 28 36 chr17 7643193 7643317 -81861236 + L1M LINE L1 5222 5347 -810 2393 82 0 7 chr17 7643536 7643840 -81860713 - AluSx SINE Alu -10 302 1 562 231 22 22 chr17 7644208 7644390 -81860163 - LTR16C LTR ERVL 0 491 310 226 276 23 35 chr17 7644470 7644557 -81859996 - LTR16C LTR ERVL -310 181 96 375 285 81 63 chr17 7644731 7644817 -81859736 + L1M4 LINE L1 4387 4470 -1676 2489 43 26 10 chr17 7644817 7645121 -81859432 + AluY SINE Alu 1 309 -2 375 285 81 63 chr17 7645121 7645385 -81859168 + L1M4 LINE L1 4470 4749 -1397 4014 193 34 51 chr17 7645385 7646371 -81858182 - LTR5 LTR ERVK 0 969 1 375 285 81 63 chr17 7646371 7646461 -81858092 + L1M4 LINE L1 4749 4836 -1310 2494 83 3 3 chr17 7646560 7646873 -81857680 + AluSp SINE Alu 1 313 0 2996 115 0 58 chr17 7646873 7646986 -81857567 + L1PB3 LINE L1 5677 5795 -359 2326 117 3 0 chr17 7646986 7647293 -81857260 + AluSx SINE Alu 5 312 0 2996 115 0 58 chr17 7647293 7647683 -81856870 + L1PB3 LINE L1 5795 6151 -3 2570 63 0 0 chr17 7647911 7648211 -81856342 - AluSc SINE Alu -9 300 1 395 106 15 0 chr17 7648751 7648817 -81855736 + (TC)n Simple_repeat Simple_repeat 2 68 0 2392 87 7 0 chr17 7649180 7649479 -81855074 - AluY SINE Alu -10 301 1 2282 112 0 0 chr17 7649545 7649848 -81854705 - AluSg SINE Alu -7 303 1 657 101 0 0 chr17 7650460 7650549 -81854004 - AluSg/x SINE Alu -9 303 215 2764 89 11 3 chr17 7650550 7650911 -81853642 + THE1B LTR MaLR 1 364 0 2943 105 85 0 chr17 7650911 7651369 -81853184 + THE1B-int LTR MaLR 1 497 -1083 2265 98 16 3 chr17 7651369 7651676 -81852877 + AluSp SINE Alu 1 311 -2 751 176 0 37 chr17 7651942 7652078 -81852475 + FLAM_C SINE Alu 1 131 -2 485 294 65 33 chr17 7652079 7652355 -81852198 + HAL1b LINE L1 224 508 -840 581 155 23 39 chr17 7652376 7652505 -81852048 - L1MC2 LINE L1 -338 6006 5880 1305 118 0 0 chr17 7652509 7652687 -81851866 - AluSp SINE Alu 0 313 136 3586 145 7 16 chr17 7652688 7653142 -81851411 - L1MC2 LINE L1 -453 5891 5441 1376 177 66 22 chr17 7653142 7653450 -81851103 - AluJb SINE Alu 0 320 1 3586 145 7 16 chr17 7653450 7653701 -81850852 - L1MC2 LINE L1 -903 5441 5189 405 282 118 0 chr17 7653706 7653876 -81850677 + HAL1b LINE L1 546 735 -613 1584 179 34 0 chr17 7653879 7654141 -81850412 + AluJb SINE Alu 1 271 -41 2436 98 3 9 chr17 7654216 7654531 -81850022 + AluSp SINE Alu 1 313 0 320 166 18 11 chr17 7654562 7654650 -81849903 + Alu SINE Alu 1 52 -248 771 274 39 4 chr17 7654748 7654978 -81849575 - ERVL LTR ERVL -636 5128 4891 1922 95 88 0 chr17 7655025 7655298 -81849255 + AluSg SINE Alu 1 297 -13 945 240 132 39 chr17 7655313 7655751 -81848802 - ERVL LTR ERVL -966 4798 4320 2526 44 0 13 chr17 7655884 7656182 -81848371 - AluY SINE Alu -17 294 1 2226 95 0 3 chr17 7657025 7657310 -81847243 + AluSg SINE Alu 3 286 -24 2462 78 3 7 chr17 7657594 7657903 -81846650 + AluSx SINE Alu 1 308 -4 1779 80 124 0 chr17 7658373 7658648 -81845905 - MER4A LTR ERV1 -14 650 342 828 90 42 102 chr17 7658646 7658789 -81845764 - MER4A LTR ERV1 -507 157 24 * 1913 112 12 68 chr17 7658789 7659112 -81845441 - AluSx SINE Alu -7 305 1 828 90 42 102 chr17 7659112 7659135 -81845418 - MER4A LTR ERV1 -640 24 1 180 75 150 25 chr17 7659192 7659232 -81845321 - L3 LINE CR1 -463 1114 1070 858 132 0 23 chr17 7659610 7659768 -81844785 - AluJo SINE Alu 0 311 157 2200 173 2 84 chr17 7659789 7660264 -81844289 + MER41B LTR ERV1 132 567 -68 2556 62 0 7 chr17 7660264 7660573 -81843980 - AluSg SINE Alu -3 307 1 2351 89 0 3 chr17 7660573 7660865 -81843688 - AluSx SINE Alu -7 305 15 280 150 12 113 chr17 7660870 7660950 -81843603 + MER66A LTR ERV1 395 466 -12 1011 130 13 7 chr17 7660958 7661112 -81843441 - AluJo SINE Alu -146 166 12 3005 162 23 92 chr17 7661272 7661393 -81843160 - LTR8 LTR ERV1 0 691 563 2227 100 0 7 chr17 7661393 7661684 -81842869 - AluSc SINE Alu -20 289 1 1347 170 83 104 chr17 7661684 7662144 -81842409 + LTR7 LTR ERV1 1 450 0 3005 162 23 92 chr17 7662144 7662763 -81841790 - LTR8 LTR ERV1 -126 565 1 865 88 0 0 chr17 7663400 7663513 -81841040 - AluSg/x SINE Alu -5 305 193 2397 151 32 114 chr17 7663663 7664093 -81840460 + LTR9 LTR ERV1 1 361 -251 2301 75 4 0 chr17 7664093 7664402 -81840151 + AluSq SINE Alu 5 314 0 2397 151 32 114 chr17 7664402 7664625 -81839928 + LTR9 LTR ERV1 361 601 -11 1832 192 16 39 chr17 7664962 7665343 -81839210 + MLT1A2 LTR MaLR 3 374 0 2536 66 3 0 chr17 7665960 7666263 -81838290 - AluSg SINE Alu -6 304 1 306 314 85 8 chr17 7666321 7666439 -81838114 + MIR SINE MIR 130 256 -6 2166 112 3 3 chr17 7667506 7667800 -81836753 - AluSx SINE Alu -18 294 1 2447 67 0 3 chr17 7668435 7668735 -81835818 + AluY SINE Alu 1 299 -12 24 32 0 0 chr17 7668737 7668768 -81835785 + AT_rich Low_complexity Low_complexity 1 31 0 739 263 19 0 chr17 7668809 7668969 -81835584 + MIR SINE MIR 2 164 -98 1281 158 72 66 chr17 7668992 7669053 -81835500 + MLT1A1 LTR MaLR 1 60 -305 2525 73 0 7 chr17 7669053 7669355 -81835198 + AluSp SINE Alu 1 300 -13 1281 158 72 66 chr17 7669355 7669597 -81834956 + MLT1A1 LTR MaLR 60 306 -59 594 210 73 0 chr17 7669599 7669723 -81834830 - FLAM_C SINE Alu -10 133 1 341 191 15 0 chr17 7669724 7669792 -81834761 + MLT1A1 LTR MaLR 297 365 0 262 217 9 113 chr17 7669810 7669870 -81834683 + MIR SINE MIR 147 193 -69 2744 13 0 3 chr17 7669870 7670168 -81834385 - AluY SINE Alu -14 297 1 262 217 9 113 chr17 7670168 7670213 -81834340 + MIR SINE MIR 193 241 -21 2098 125 0 19 chr17 7670226 7670538 -81834015 - AluSg SINE Alu -4 306 1 762 179 0 15 chr17 7670538 7670672 -81833881 - AluJo SINE Alu -178 134 3 679 159 80 55 chr17 7670672 7670835 -81833718 - MLT1A1 LTR MaLR -207 167 1 * 785 309 93 15 chr17 7670835 7671242 -81833311 - MLT1L LTR MaLR -80 535 97 2265 92 10 3 chr17 7671356 7671659 -81832894 - AluSq SINE Alu -8 305 1 2008 78 4 0 chr17 7672589 7672834 -81831719 + AluY SINE Alu 1 246 -65 837 98 0 0 chr17 7672934 7673046 -81831507 - AluSg SINE Alu -198 112 1 4393 150 25 27 chr17 7673234 7674019 -81830534 + LTR1 LTR ERV1 1 784 -1 2151 85 6 63 chr17 7674073 7674404 -81830149 + AluSx SINE Alu 1 312 0 222 281 11 67 chr17 7674983 7675072 -81829481 + L2 LINE L2 2279 2362 -952 2459 96 3 0 chr17 7675103 7675415 -81829138 - AluSq SINE Alu 0 313 1 2232 80 0 40 chr17 7675603 7675905 -81828648 - AluSq SINE Alu -19 294 5 456 296 127 30 chr17 7675922 7676260 -81828293 + L2 LINE L2 2543 2913 -401 2543 91 0 0 chr17 7676967 7677276 -81827277 - AluSc SINE Alu 0 309 1 225 0 0 0 chr17 7677363 7677388 -81827165 + (A)n Simple_repeat Simple_repeat 1 25 0 637 293 35 20 chr17 7677388 7677586 -81826967 - MIR SINE MIR -38 224 24 422 273 115 34 chr17 7677753 7677962 -81826591 - L2 LINE L2 -5 3308 3083 2292 103 0 3 chr17 7678343 7678643 -81825910 - AluSx SINE Alu -13 299 1 5403 40 0 2 chr17 7679529 7680172 -81824381 - L1PA4 LINE L1 -3 6152 5511 8341 52 4 8 chr17 7680319 7681330 -81823223 - LTR13 LTR ERVK 0 1007 1 2319 93 7 0 chr17 7681565 7681856 -81822697 - AluSx SINE Alu -8 304 12 2090 48 0 24 chr17 7682008 7682258 -81822295 - AluY SINE Alu -17 294 51 553 41 0 41 chr17 7682258 7682331 -81822222 - AluY SINE Alu -164 147 78 655 165 10 0 chr17 7682543 7682646 -81821907 - AluJb SINE Alu -13 299 196 2099 108 11 7 chr17 7682650 7682937 -81821616 - AluSx SINE Alu -24 288 1 1720 176 78 22 chr17 7683457 7683983 -81820570 - MLT2A2 LTR ERVL 0 554 1 2208 111 3 0 chr17 7684477 7684775 -81819778 + AluSx SINE Alu 1 299 -13 282 263 5 88 chr17 7684930 7685135 -81819418 - HAL1 LINE L1 -310 2197 2010 256 216 189 0 chr17 7685340 7685414 -81819139 + LOR1b LTR ERV1 3 90 -371 2275 104 0 0 chr17 7685432 7685731 -81818822 - AluY SINE Alu -12 299 1 2376 94 3 0 chr17 7685863 7686161 -81818392 - AluSp SINE Alu -12 301 3 972 288 54 25 chr17 7686389 7686833 -81817720 - HAL1 LINE L1 -833 1674 1218 2494 83 0 3 chr17 7687254 7687566 -81816987 + AluSq SINE Alu 1 311 -2 527 295 90 18 chr17 7687810 7688173 -81816380 + L1M2 LINE L1 5262 5648 -643 588 111 0 0 chr17 7688175 7688265 -81816288 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 1054 149 12 6 chr17 7688273 7688441 -81816112 - FRAM SINE Alu -7 169 1 258 216 122 0 chr17 7688529 7688603 -81815950 + L1ME2 LINE L1 5729 5811 -1997 319 341 38 8 chr17 7688627 7688759 -81815794 + L1ME2 LINE L1 5811 5946 -218 1123 244 53 67 chr17 7688815 7689290 -81815263 - MLT1H LTR MaLR 0 549 82 2275 77 59 3 chr17 7689557 7689844 -81814709 + AluSq SINE Alu 1 303 -10 226 231 0 19 chr17 7690210 7690262 -81814291 - MER112 DNA MER1_type -6 254 204 307 247 148 0 chr17 7690342 7690423 -81814130 - L2 LINE L2 0 3313 3221 2478 78 7 0 chr17 7690828 7691137 -81813416 - AluSq SINE Alu -2 311 1 403 281 22 22 chr17 7691214 7691353 -81813200 + MIR SINE MIR 88 226 -36 207 171 0 0 chr17 7691668 7691703 -81812850 + GA-rich Low_complexity Low_complexity 2 36 0 241 120 53 13 chr17 7692396 7692471 -81812082 + (CCCCAG)n Simple_repeat Simple_repeat 6 83 0 438 159 40 23 chr17 7692899 7693075 -81811478 + (TG)n Simple_repeat Simple_repeat 2 180 0 663 116 56 0 chr17 7693094 7693432 -81811121 + (TG)n Simple_repeat Simple_repeat 1 357 0 1059 169 0 17 chr17 7693584 7693761 -81810792 - AluJo SINE Alu -55 257 84 238 343 40 0 chr17 7694084 7694183 -81810370 + L2 LINE L2 3146 3248 -24 425 246 217 11 chr17 7694448 7694623 -81809930 - L1MEc LINE L1 -5083 1313 1103 364 335 29 4 chr17 7694919 7695164 -81809389 - HAL1 LINE L1 -902 1605 1355 581 167 0 0 chr17 7695188 7695284 -81809269 + MSTB LTR MaLR 327 422 -4 4062 189 66 44 chr17 7695287 7696200 -81808353 - L1 LINE L1 -3752 3813 2921 1831 185 7 7 chr17 7696200 7696503 -81808050 + AluJb SINE Alu 2 304 -8 4062 189 66 44 chr17 7696503 7696659 -81807894 - L1 LINE L1 -4644 2921 2770 1622 138 120 22 chr17 7696659 7696934 -81807619 - AluSg SINE Alu -8 302 1 4062 189 66 44 chr17 7696934 7697242 -81807311 - L1 LINE L1 -4795 2770 2405 6538 222 16 7 chr17 7697268 7698596 -81805957 + L1PA13 LINE L1 1 1340 -5447 1595 219 20 122 chr17 7698597 7699195 -81805358 + L1ME1 LINE L1 5510 6046 -120 408 158 40 0 chr17 7699207 7699283 -81805270 + MLT1D LTR MaLR 28 106 -399 2218 102 7 3 chr17 7699292 7699595 -81804958 + AluSx SINE Alu 1 304 -8 1436 211 31 0 chr17 7699687 7699976 -81804577 + MLT2B3 LTR ERVL 210 507 -47 243 203 0 0 chr17 7699977 7700041 -81804512 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 255 118 0 0 chr17 7700046 7700093 -81804460 + MLT2B3 LTR ERVL 459 544 -10 481 284 109 40 chr17 7700274 7700590 -81803963 + L1MDa LINE L1 2365 2700 -3840 1947 88 0 16 chr17 7700627 7700877 -81803676 + AluSc SINE Alu 1 246 -63 481 123 32 52 chr17 7700978 7701133 -81803420 + C-rich Low_complexity Low_complexity 1 152 0 1528 151 14 76 chr17 7701146 7701437 -81803116 - AluJb SINE Alu -39 273 1 1466 205 57 40 chr17 7701437 7701494 -81803059 - L1MEc LINE L1 -5279 1117 1062 2548 71 0 0 chr17 7701494 7701804 -81802749 - AluY SINE Alu -1 310 1 1466 205 57 40 chr17 7701804 7702170 -81802383 - L1MEc LINE L1 -5334 1062 687 879 303 8 11 chr17 7702170 7702434 -81802119 - L1MEc LINE L1 -6054 342 80 625 287 28 17 chr17 7702491 7702672 -81801881 - MIR SINE MIR -50 212 30 194 104 0 62 chr17 7703308 7703356 -81801197 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 189 0 0 chr17 7703466 7703519 -81801034 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 179 26 26 chr17 7705360 7705477 -81799076 + (TG)n Simple_repeat Simple_repeat 1 117 0 416 131 51 23 chr17 7705536 7705711 -81798842 + (TG)n Simple_repeat Simple_repeat 1 180 0 187 91 61 45 chr17 7705701 7705767 -81798786 + (GTGTG)n Simple_repeat Simple_repeat 4 70 0 * 2310 88 0 3 chr17 7706275 7706572 -81797981 - AluY SINE Alu -15 296 1 325 215 0 0 chr17 7706716 7706781 -81797772 + MER116 DNA Mariner 16 80 0 391 320 59 40 chr17 7706790 7707012 -81797541 - L1M4 LINE L1 -3675 2471 2246 384 277 0 21 chr17 7707015 7707109 -81797444 - MER5B DNA MER1_type -1 177 86 407 42 0 0 chr17 7707110 7707158 -81797395 + AluY SINE Alu 2 49 -269 1464 171 0 13 chr17 7707258 7707497 -81797056 - AluSx SINE Alu -67 245 10 2358 95 0 3 chr17 7707910 7708205 -81796348 - AluSg SINE Alu -16 294 1 2248 118 3 0 chr17 7708226 7708530 -81796023 - AluSx SINE Alu -7 305 1 2377 99 3 0 chr17 7708530 7708831 -81795722 - AluSp SINE Alu -8 305 3 1317 19 0 0 chr17 7708964 7709118 -81795435 + L1PA4 LINE L1 6001 6154 -1 218 350 95 7 chr17 7710400 7710537 -81794016 + MIR SINE MIR 109 257 -5 2904 113 210 70 chr17 7711807 7712967 -81791586 + pTR5 LTR ERV1 743 2468 0 2258 106 0 0 chr17 7713249 7713541 -81791012 - AluSx SINE Alu -20 292 1 333 259 49 105 chr17 7713938 7714100 -81790453 + L1MC/D LINE L1 3808 3960 -2186 803 269 86 20 chr17 7714101 7714402 -81790151 - MLT1J LTR MaLR -148 363 43 2141 121 0 58 chr17 7714442 7714772 -81789781 - AluSx SINE Alu -1 311 1 1790 134 6 75 chr17 7714774 7715109 -81789444 - AluJb SINE Alu 0 312 1 832 215 49 0 chr17 7715109 7715272 -81789281 + MER58B DNA MER1_type 171 341 0 247 263 20 30 chr17 7715331 7715430 -81789123 + L1MC/D LINE L1 4101 4198 -1948 434 319 67 51 chr17 7715561 7715617 -81788936 + L1MC/D LINE L1 4557 4611 -1535 2151 124 3 0 chr17 7715617 7715908 -81788645 - AluSx SINE Alu -20 292 1 434 319 67 51 chr17 7715908 7716366 -81788187 + L1MC/D LINE L1 4611 5082 -1064 2273 112 3 0 chr17 7716366 7716671 -81787882 - AluSc SINE Alu -3 306 1 434 319 67 51 chr17 7716671 7716768 -81787785 + L1MC/D LINE L1 5082 5176 -970 608 211 181 20 chr17 7716768 7717189 -81787364 - LTR33 LTR ERVL 0 521 1 330 316 115 64 chr17 7717219 7717493 -81787060 + L1MC/D LINE L1 5306 5565 -2243 2384 88 0 0 chr17 7717493 7717787 -81786766 + AluSg SINE Alu 1 294 -16 330 316 115 64 chr17 7717787 7717798 -81786755 + L1MC/D LINE L1 5565 5574 -2234 2184 117 0 39 chr17 7717798 7718107 -81786446 + AluSq SINE Alu 1 297 -16 330 316 115 64 chr17 7718107 7718256 -81786297 + L1MC/D LINE L1 5574 5763 -2045 1306 133 20 5 chr17 7718298 7718494 -81786059 + AluSp SINE Alu 20 218 -95 227 287 0 52 chr17 7718833 7718969 -81785584 - L1MC/D LINE L1 -1923 5885 5757 1461 218 3 40 chr17 7719151 7719454 -81785099 + AluJo SINE Alu 1 292 -20 302 298 35 28 chr17 7719591 7719732 -81784821 - HAL1 LINE L1 -85 2422 2281 536 327 53 43 chr17 7719760 7720063 -81784490 - HAL1 LINE L1 -312 2195 1890 578 193 91 30 chr17 7720074 7720271 -81784282 - MER69 DNA AcHobo -10 2516 2308 320 214 0 0 chr17 7720281 7720337 -81784216 - L1MC4 LINE L1 -1339 6703 6648 1454 145 0 0 chr17 7720338 7720538 -81784015 - AluJo SINE Alu -13 299 100 447 134 0 0 chr17 7720589 7720656 -81783897 - AluJ/FLAM SINE Alu -224 88 22 327 248 138 18 chr17 7720664 7720773 -81783780 + MER50 LTR ERV1 10 131 -603 2114 93 0 4 chr17 7720774 7721044 -81783509 - AluSg1 SINE Alu -40 269 1 3334 170 7 38 chr17 7721045 7721621 -81782932 - L1MD2 LINE L1 -465 6288 5732 2196 89 7 0 chr17 7721621 7721924 -81782629 - AluSx SINE Alu 0 307 3 3334 170 7 38 chr17 7721924 7722073 -81782480 - L1MD2 LINE L1 -1021 5732 5580 2382 98 0 0 chr17 7722374 7722680 -81781873 - AluSx SINE Alu -6 306 1 286 301 44 0 chr17 7723459 7723596 -81780957 - LTR16A1 LTR ERVL -10 481 305 363 252 50 8 chr17 7723669 7723788 -81780765 - LTR16C LTR ERVL -164 327 204 2357 74 20 0 chr17 7723886 7724185 -81780368 + AluY SINE Alu 1 305 -6 3359 234 18 32 chr17 7724310 7724837 -81779716 - L1MD2 LINE L1 -2138 4402 3869 1583 133 20 119 chr17 7724837 7725182 -81779371 - AluJb SINE Alu -1 311 1 3359 234 18 32 chr17 7725182 7725211 -81779342 - L1MD2 LINE L1 -2671 3869 3841 2146 90 11 4 chr17 7725211 7725530 -81779023 - AluY SINE Alu 0 321 1 3359 234 18 32 chr17 7725530 7725706 -81778847 - L1MD2 LINE L1 -2699 3841 3664 4230 170 40 51 chr17 7725706 7726670 -81777883 + LTR13 LTR ERVK 1 954 0 3359 234 18 32 chr17 7726670 7726966 -81777587 - L1MD2 LINE L1 -2876 3664 3385 2000 124 60 0 chr17 7726966 7727248 -81777305 + AluSx SINE Alu 1 299 -13 1094 222 52 73 chr17 7727248 7727451 -81777102 - L1MD2 LINE L1 -5027 1516 1310 1835 163 0 40 chr17 7727451 7727776 -81776777 - AluJb SINE Alu 0 312 1 1094 222 52 73 chr17 7727776 7728014 -81776539 - L1MD2 LINE L1 -5233 1310 1083 1720 112 123 8 chr17 7728014 7728290 -81776263 - AluSg1 SINE Alu 0 305 1 1094 222 52 73 chr17 7728290 7728342 -81776211 - L1MD2 LINE L1 -5460 1083 1031 942 133 29 46 chr17 7728360 7728533 -81776020 - LTR5 LTR ERVK 0 969 800 2263 54 18 4 chr17 7728535 7728849 -81775704 - AluY SINE Alu 0 318 1 4486 159 32 37 chr17 7728849 7729661 -81774892 - LTR5 LTR ERVK -161 808 1 325 288 8 8 chr17 7729665 7729783 -81774770 - L1MD2 LINE L1 -5511 1032 915 208 233 0 0 chr17 7730250 7730267 -81774286 + A-rich Low_complexity Low_complexity 4 20 -26 2378 94 7 0 chr17 7730267 7730574 -81773979 + AluSc SINE Alu 1 309 0 208 233 0 0 chr17 7730574 7730599 -81773954 + A-rich Low_complexity Low_complexity 19 46 0 307 394 49 39 chr17 7730664 7730948 -81773605 - L1MD2 LINE L1 -6234 306 20 1250 258 92 32 chr17 7730949 7731150 -81773403 + L1M4 LINE L1 2748 2935 -3211 2485 65 0 10 chr17 7731150 7731459 -81773094 + AluY SINE Alu 1 306 -5 1250 258 92 32 chr17 7731459 7731745 -81772808 + L1M4 LINE L1 2935 3202 -2944 1969 157 7 10 chr17 7731745 7731879 -81772674 + AluSx SINE Alu 1 134 -178 2387 57 47 0 chr17 7731879 7732175 -81772378 + AluY SINE Alu 1 310 -1 1969 157 7 10 chr17 7732175 7732340 -81772213 + AluSx SINE Alu 134 299 -13 1250 258 92 32 chr17 7732340 7732379 -81772174 + L1M4 LINE L1 3202 3237 -2909 2532 60 3 19 chr17 7732379 7732694 -81771859 + AluY SINE Alu 1 310 -1 1250 258 92 32 chr17 7732694 7732945 -81771608 + L1M4 LINE L1 3237 3574 -2572 284 155 357 0 chr17 7732939 7733068 -81771485 + L1M4 LINE L1 4878 5052 -1094 * 1210 176 14 5 chr17 7733068 7733278 -81771275 + AluJo SINE Alu 1 212 -100 250 306 72 0 chr17 7733285 7733396 -81771157 - L1M4 LINE L1 -1898 4248 4130 1175 246 81 48 chr17 7733887 7734427 -81770126 + L2 LINE L2 2473 3069 -244 2816 109 23 32 chr17 7734427 7734605 -81769948 + MSTA LTR MaLR 1 179 -249 2493 72 7 0 chr17 7734605 7734909 -81769644 - AluY SINE Alu -5 306 1 2816 109 23 32 chr17 7734909 7735162 -81769391 + MSTA LTR MaLR 179 428 0 1175 246 81 48 chr17 7735162 7735416 -81769137 + L2 LINE L2 3069 3313 0 3859 48 13 0 chr17 7735434 7735908 -81768645 + L1PA8 LINE L1 5691 6170 -2 248 294 22 0 chr17 7735946 7736038 -81768515 + L1MC4a LINE L1 4498 4591 -1555 261 333 152 0 chr17 7736246 7736411 -81768142 + LTR16A LTR ERVL 261 450 0 2186 103 33 0 chr17 7736463 7736765 -81767788 + AluSx SINE Alu 1 312 0 310 298 90 75 chr17 7736765 7736953 -81767600 + L1MC4a LINE L1 5719 5909 -1899 783 176 0 0 chr17 7738163 7738305 -81766248 + AluSp/q SINE Alu 172 313 0 1749 142 14 17 chr17 7738409 7738698 -81765855 - AluSx SINE Alu -21 291 4 258 398 6 0 chr17 7738708 7738869 -81765684 + (CCCCAA)n Simple_repeat Simple_repeat 2 163 0 223 369 23 17 chr17 7738948 7739124 -81765429 + (CCCCAA)n Simple_repeat Simple_repeat 1 177 0 221 209 76 51 chr17 7740700 7740858 -81763695 + (ATGGTG)n Simple_repeat Simple_repeat 3 164 0 567 311 47 0 chr17 7740861 7741073 -81763480 + MIR SINE MIR 12 233 -29 2232 83 6 10 chr17 7741493 7741805 -81762748 + AluSq SINE Alu 1 311 -2 524 231 125 25 chr17 7742416 7742576 -81761977 - MER5B DNA MER1_type -1 177 2 313 263 56 44 chr17 7743240 7743261 -81761292 - L1MA10 LINE L1 -2 6332 6312 647 243 30 82 chr17 7743261 7743528 -81761025 - L1ME2 LINE L1 -13 6151 5899 1360 227 101 55 chr17 7743799 7744324 -81760229 - MLT1H LTR MaLR 0 549 1 2169 90 3 3 chr17 7744352 7744652 -81759901 - AluSp SINE Alu -13 300 1 862 213 14 36 chr17 7744765 7744986 -81759567 - L2 LINE L2 -793 2521 2306 1757 161 11 0 chr17 7745131 7745410 -81759143 - AluJo SINE Alu -30 282 1 504 255 76 0 chr17 7745411 7745556 -81758997 - LTR33 LTR ERVL -40 481 326 272 324 11 45 chr17 7745948 7746124 -81758429 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 244 370 6 6 chr17 7746184 7746346 -81758207 + (CCCCAA)n Simple_repeat Simple_repeat 4 165 0 1095 52 8 0 chr17 7746497 7746631 -81757922 + AluSq/x SINE Alu 1 135 -178 2217 101 3 3 chr17 7746632 7746940 -81757613 + AluSc SINE Alu 1 308 -1 807 248 140 12 chr17 7747074 7747409 -81757144 - MER115 DNA AcHobo -313 380 3 906 47 0 58 chr17 7747428 7747599 -81756954 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 1994 95 29 0 chr17 7747601 7747874 -81756679 - AluSp SINE Alu -32 281 1 2368 146 57 5 chr17 7748752 7749157 -81755396 + MSTA LTR MaLR 1 426 -2 10087 164 20 4 chr17 7749160 7750779 -81753774 + MSTA-int LTR MaLR 7 1651 0 2405 125 62 34 chr17 7750779 7750966 -81753587 + MSTA LTR MaLR 1 181 -247 1951 138 0 3 chr17 7750966 7751262 -81753291 - AluSg SINE Alu -15 295 1 2405 125 62 34 chr17 7751262 7751490 -81753063 + MSTA LTR MaLR 181 428 0 532 337 25 10 chr17 7751627 7751826 -81752727 + MIR SINE MIR 32 233 -29 320 73 0 0 chr17 7753102 7753143 -81751410 + L1MA9 LINE L1 5910 5950 -362 2247 97 0 0 chr17 7753143 7753441 -81751112 + AluSg SINE Alu 1 298 -12 1037 72 0 0 chr17 7755225 7755363 -81749190 - AluSp/q SINE Alu -5 308 171 2051 108 0 7 chr17 7755365 7755661 -81748892 - AluSx SINE Alu -18 294 1 1125 169 23 27 chr17 7755745 7755964 -81748589 - AluJo SINE Alu -11 301 84 2321 67 7 0 chr17 7756271 7756570 -81747983 + AluSx SINE Alu 1 301 -11 930 159 62 40 chr17 7756660 7756836 -81747717 + MLT1C LTR MaLR 38 217 -250 1815 105 6 125 chr17 7756837 7757180 -81747373 + AluSx SINE Alu 1 302 0 2052 78 0 7 chr17 7758027 7758297 -81746256 - AluSc SINE Alu -41 268 1 425 252 130 61 chr17 7758467 7758729 -81745824 + MLT1J2 LTR MaLR 164 443 -7 316 317 56 21 chr17 7758908 7759050 -81745503 - L2 LINE L2 -1252 2062 1916 260 250 37 81 chr17 7759468 7759533 -81745020 - L1M LINE L1 -790 5390 5333 2089 107 0 20 chr17 7759533 7759832 -81744721 - AluSc SINE Alu -16 293 1 260 250 37 81 chr17 7759832 7759902 -81744651 - L1M LINE L1 -847 5333 5261 300 223 122 47 chr17 7759902 7760050 -81744503 - L1MEc LINE L1 -4807 1589 1431 237 347 42 21 chr17 7760747 7760842 -81743711 + MER91C DNA MER1_type 31 127 -13 2162 121 0 13 chr17 7761230 7761544 -81743009 + AluSq SINE Alu 2 311 -2 2202 100 3 0 chr17 7761663 7761963 -81742590 - AluSx SINE Alu -11 301 1 2022 43 90 14 chr17 7762087 7762365 -81742188 - AluY SINE Alu -12 299 1 294 256 44 80 chr17 7763035 7763114 -81741439 + MIR SINE MIR 103 176 -86 2055 109 3 3 chr17 7763114 7763407 -81741146 - AluSq SINE Alu -18 295 3 294 256 44 80 chr17 7763407 7763464 -81741089 + MIR SINE MIR 176 234 -28 1484 290 100 19 chr17 7766341 7767092 -81737461 + L2 LINE L2 1562 2373 -941 189 195 0 0 chr17 7767365 7767406 -81737147 + (TG)n Simple_repeat Simple_repeat 2 42 0 1075 147 26 103 chr17 7768446 7768678 -81735875 + MER20 DNA MER1_type 6 219 0 2100 91 7 17 chr17 7771384 7771680 -81732873 - AluSx SINE Alu -16 296 4 240 191 0 21 chr17 7772390 7772437 -81732116 + MLT1K LTR MaLR 509 554 -34 580 243 53 32 chr17 7773572 7773761 -81730792 - LTR33 LTR ERVL -2 519 327 14689 138 29 63 chr17 7773850 7774831 -81729722 + L1MA3 LINE L1 2181 3194 -4530 1566 56 0 95 chr17 7774831 7775062 -81729491 - AluSc SINE Alu -100 209 1 14689 138 29 63 chr17 7775062 7777788 -81726765 + L1MA3 LINE L1 3194 6011 -1713 19161 35 9 0 chr17 7777788 7780905 -81723648 + L1PA4 LINE L1 3046 6151 -4 14689 138 29 63 chr17 7780905 7781288 -81723265 + L1MA3 LINE L1 6011 6406 -1318 444 19 0 0 chr17 7781288 7781341 -81723212 + (CA)n Simple_repeat Simple_repeat 2 54 0 14689 138 29 63 chr17 7781341 7782751 -81721802 + L1MA3 LINE L1 6406 7478 -246 3681 114 6 4 chr17 7782751 7783261 -81721292 + MER9 LTR ERVK 1 511 0 32807 58 19 18 chr17 7783261 7784018 -81720535 + HERVK9 LTR ERVK 1 755 -5161 187 233 0 83 chr17 7784018 7784078 -81720475 + MER5B DNA MER1_type 55 109 -69 32807 58 19 18 chr17 7784078 7787421 -81717132 + HERVK9 LTR ERVK 755 4166 -1750 6561 70 21 1 chr17 7787417 7788243 -81716310 + HERVK9 LTR ERVK 4793 5634 -282 * 2342 105 17 12 chr17 7788268 7788620 -81715933 + HERVK9 LTR ERVK 4936 5916 0 3845 93 0 10 chr17 7788620 7789136 -81715417 + MER9 LTR ERVK 1 511 0 1538 88 20 36 chr17 7789136 7789386 -81715167 + L1MA2 LINE L1 6057 6302 -2 550 329 44 16 chr17 7789582 7789831 -81714722 + MIR SINE MIR 7 262 0 402 57 0 0 chr17 7790003 7790056 -81714497 + (T)n Simple_repeat Simple_repeat 1 53 0 895 148 216 26 chr17 7790296 7790689 -81713864 + MER51A LTR ERV1 1 633 -1 1144 155 186 26 chr17 7790690 7790954 -81713599 + MER51A-int LTR ERV1 1 306 -7510 1245 288 59 70 chr17 7791683 7792701 -81711852 + MER51A-int LTR ERV1 4799 5805 -1951 2628 44 0 0 chr17 7792754 7793052 -81711501 - AluY SINE Alu -13 298 1 2081 99 4 4 chr17 7793052 7793324 -81711229 - AluSp SINE Alu -19 294 23 334 303 47 38 chr17 7793530 7793741 -81710812 + MER51A-int LTR ERV1 4654 4866 -1810 225 0 0 0 chr17 7793812 7793837 -81710716 + (T)n Simple_repeat Simple_repeat 1 25 0 1700 186 58 0 chr17 7793909 7794221 -81710332 + MER51A-int LTR ERV1 7487 7816 0 750 128 195 46 chr17 7794223 7794418 -81710135 + MER51A LTR ERV1 1 224 -410 * 1105 128 78 25 chr17 7794415 7794619 -81709934 + MER51A LTR ERV1 420 634 0 338 224 56 37 chr17 7794620 7794727 -81709826 - L1M4 LINE L1 -1276 4870 4762 493 290 52 8 chr17 7794743 7794995 -81709558 - L1ME LINE L1 -3322 2758 2496 506 262 48 62 chr17 7794996 7795332 -81709221 - L1ME LINE L1 -5703 367 37 1283 118 0 42 chr17 7795553 7795606 -81708947 + L1PA15 LINE L1 5448 5502 -663 2429 53 0 7 chr17 7795606 7795922 -81708631 + AluY SINE Alu 1 314 0 1283 118 0 42 chr17 7795922 7796079 -81708474 + L1PA15 LINE L1 5502 5650 -515 2435 109 6 3 chr17 7796089 7796436 -81708117 - THE1B LTR MaLR -16 348 1 3601 116 4 0 chr17 7796436 7796952 -81707601 + L1PA15 LINE L1 5646 6163 -2 4020 146 56 53 chr17 7797168 7797461 -81707092 - L1MB5 LINE L1 0 6174 5883 207 0 0 0 chr17 7797461 7797484 -81707069 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2249 99 0 0 chr17 7797484 7797766 -81706787 - AluSg SINE Alu -28 282 1 4020 146 56 53 chr17 7797766 7798359 -81706194 - L1MB5 LINE L1 -290 5884 5284 1047 65 0 7 chr17 7798656 7798794 -81705759 + L1PA7 LINE L1 6011 6147 -7 1917 166 0 23 chr17 7798798 7798970 -81705583 - AluJo SINE Alu -7 305 142 2218 60 4 4 chr17 7798970 7799235 -81705318 - AluY SINE Alu -5 306 42 1917 166 0 23 chr17 7799235 7799370 -81705183 - AluJo SINE Alu -170 142 5 5269 155 31 21 chr17 7800341 7802132 -81702421 - L1MA4 LINE L1 -11 6289 4464 283 193 0 0 chr17 7802574 7802631 -81701922 - MLT1K LTR MaLR -8 580 524 4457 170 9 37 chr17 7803905 7804645 -81699908 - L1 LINE L1 -782 5364 4658 2133 138 0 3 chr17 7804645 7804950 -81699603 - AluSx SINE Alu -8 304 1 4457 170 9 37 chr17 7804950 7805203 -81699350 - L1 LINE L1 -1488 4658 4399 1540 173 68 0 chr17 7805190 7805526 -81699027 - L1 LINE L1 -1983 4163 3805 * 4689 155 16 39 chr17 7805525 7806012 -81698541 + L1MA7 LINE L1 5341 5797 -494 2395 106 0 0 chr17 7806012 7806323 -81698230 + AluSx SINE Alu 1 311 -1 4689 155 16 39 chr17 7806323 7806807 -81697746 + L1MA7 LINE L1 5797 6290 -1 1067 184 15 25 chr17 7806965 7807161 -81697392 + AluSx SINE Alu 4 197 -115 6893 62 27 25 chr17 7807185 7808079 -81696474 + MER11D LTR ERVK 1 896 -1 1490 122 5 5 chr17 7808079 7808311 -81696242 + AluSg/x SINE Alu 80 311 0 1168 161 0 0 chr17 7808311 7808479 -81696074 + AluSg/x SINE Alu 135 302 -10 899 266 67 46 chr17 7808515 7808605 -81695948 - L1 LINE L1 -3382 2764 2677 681 224 0 8 chr17 7808605 7808730 -81695823 + FLAM_A SINE Alu 2 125 -8 899 266 67 46 chr17 7808730 7809058 -81695495 - L1 LINE L1 -3469 2677 2326 2318 99 0 16 chr17 7809058 7809371 -81695182 + AluSg1 SINE Alu 1 308 -1 899 266 67 46 chr17 7809371 7809564 -81694989 - L1 LINE L1 -3820 2326 2139 559 113 0 0 chr17 7809954 7810034 -81694519 + AluSg/x SINE Alu 217 296 -13 838 136 0 0 chr17 7811172 7811290 -81693263 - AluJo SINE Alu -108 204 87 1027 119 85 0 chr17 7811291 7811468 -81693085 - MER46B DNA MER2_type -169 67 1 1684 154 73 20 chr17 7811683 7811784 -81692769 - L1MB3 LINE L1 -7 6176 6082 2462 68 0 13 chr17 7811784 7812093 -81692460 - AluSc SINE Alu -4 305 1 1684 154 73 20 chr17 7812093 7812335 -81692218 - L1MB3 LINE L1 -101 6082 5815 640 128 11 0 chr17 7812337 7812431 -81692122 - AluJo/FRAM SINE Alu -25 287 193 2169 81 0 28 chr17 7812433 7812716 -81691837 - AluSq SINE Alu -38 275 1 698 188 0 7 chr17 7812720 7812858 -81691695 - L1PB4 LINE L1 0 6156 6020 357 213 22 4 chr17 7813087 7813322 -81691231 + (CA)n Simple_repeat Simple_repeat 1 239 0 452 261 6 6 chr17 7813333 7813513 -81691040 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 227 8 0 chr17 7813559 7813687 -81690866 + (CA)n Simple_repeat Simple_repeat 1 129 0 334 237 0 48 chr17 7813700 7813833 -81690720 + (CTCA)n Simple_repeat Simple_repeat 4 127 -53 219 103 0 0 chr17 7813833 7813872 -81690681 + (CA)n Simple_repeat Simple_repeat 1 39 0 334 237 0 48 chr17 7813872 7813924 -81690629 + (CTCA)n Simple_repeat Simple_repeat 127 180 0 * 393 273 12 0 chr17 7813915 7814295 -81690258 + (CA)n Simple_repeat Simple_repeat 1 384 0 339 208 0 0 chr17 7814316 7814441 -81690112 + (CA)n Simple_repeat Simple_repeat 1 125 0 284 0 28 0 chr17 7814560 7814596 -81689957 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 265 233 17 0 chr17 7816189 7816249 -81688304 + (CTGGGG)n Simple_repeat Simple_repeat 5 65 0 2173 112 7 3 chr17 7816348 7816653 -81687900 - AluSx SINE Alu -2 310 5 444 289 16 0 chr17 7817594 7817715 -81686838 - MIR SINE MIR -118 144 22 2358 89 3 0 chr17 7817894 7818214 -81686339 + AluSx SINE Alu 1 321 0 2502 94 0 0 chr17 7818219 7818528 -81686025 + AluSq SINE Alu 1 309 -4 2309 94 3 0 chr17 7818852 7819149 -81685404 + AluSq SINE Alu 1 298 -15 478 313 16 16 chr17 7819149 7819341 -81685212 + L1ME3A LINE L1 5974 6165 -5 677 198 0 9 chr17 7819443 7819589 -81684964 - FLAM_A SINE Alu 0 145 1 1498 130 153 11 chr17 7819802 7820063 -81684490 + AluJo SINE Alu 1 298 -4 2291 97 0 13 chr17 7820094 7820394 -81684159 + AluSg1 SINE Alu 1 296 -13 2420 71 0 34 chr17 7820484 7820806 -81683747 + AluY SINE Alu 1 311 0 1867 159 0 3 chr17 7820812 7821095 -81683458 + AluSx SINE Alu 1 282 -30 1080 54 0 0 chr17 7821098 7821264 -81683289 + AluSc SINE Alu 152 317 0 2145 107 3 7 chr17 7821936 7822234 -81682319 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr17 7822237 7822282 -81682271 + (TA)n Simple_repeat Simple_repeat 2 46 0 340 308 75 15 chr17 7822503 7822636 -81681917 + MIR SINE MIR 116 256 -6 2223 84 0 24 chr17 7823477 7823773 -81680780 - AluSg SINE Alu -21 289 1 565 256 98 6 chr17 7823881 7824045 -81680508 - MIR SINE MIR 0 262 84 416 295 230 37 chr17 7824220 7824624 -81679929 + L2 LINE L2 2827 3308 -5 2175 79 3 28 chr17 7824893 7825218 -81679335 + AluSq SINE Alu 1 318 0 2289 113 0 3 chr17 7825426 7825726 -81678827 + AluSq SINE Alu 1 299 -14 292 276 31 10 chr17 7825736 7825834 -81678719 - MER5B DNA MER1_type 0 178 79 2238 111 3 0 chr17 7826466 7826764 -81677789 + AluSq SINE Alu 1 299 -14 2345 98 3 0 chr17 7826846 7827153 -81677400 + AluSg SINE Alu 1 308 -2 241 209 0 0 chr17 7828510 7828553 -81676000 + MER91A DNA MER1_type 119 161 -35 1244 81 6 0 chr17 7828599 7828760 -81675793 - AluSq SINE Alu -4 309 148 250 62 0 0 chr17 7828760 7828792 -81675761 - Alu SINE Alu -266 37 6 388 241 11 59 chr17 7830007 7830194 -81674359 + GA-rich Low_complexity Low_complexity 2 179 0 290 256 0 80 chr17 7830384 7830560 -81673993 + GA-rich Low_complexity Low_complexity 5 166 0 2242 83 40 7 chr17 7832385 7832686 -81671867 + AluY SINE Alu 1 311 0 320 280 16 74 chr17 7833063 7833252 -81671301 - L2 LINE L2 -881 2433 2256 438 211 22 160 chr17 7834992 7835126 -81669427 - L1MC5 LINE L1 -428 7533 7467 2079 105 40 17 chr17 7835126 7835422 -81669131 - AluSx SINE Alu -9 303 1 438 211 22 160 chr17 7835422 7835605 -81668948 - L1MC5 LINE L1 -494 7467 7260 242 248 168 30 chr17 7835738 7835839 -81668714 - L1MC5 LINE L1 -741 7220 7106 2244 120 3 0 chr17 7835839 7836139 -81668414 + AluSx SINE Alu 1 301 -11 1288 126 12 89 chr17 7836144 7836206 -81668347 + AluSg/x SINE Alu 83 148 -162 2376 87 0 3 chr17 7836206 7836504 -81668049 + AluSg1 SINE Alu 1 297 -12 1288 126 12 89 chr17 7836504 7836688 -81667865 + AluSg/x SINE Alu 148 310 0 632 186 113 105 chr17 7836708 7836829 -81667724 - L1MC5 LINE L1 -869 7092 6973 2346 107 0 3 chr17 7836829 7837139 -81667414 - AluSq SINE Alu -4 309 1 632 186 113 105 chr17 7837139 7837335 -81667218 - L1MC5 LINE L1 -988 6973 6769 2607 58 0 6 chr17 7837335 7837648 -81666905 + AluY SINE Alu 1 311 0 632 186 113 105 chr17 7837648 7837711 -81666842 - L1MC5 LINE L1 -1192 6769 6708 693 334 62 39 chr17 7837776 7838181 -81666372 - L1M4 LINE L1 -1437 4709 4315 2459 81 3 10 chr17 7838181 7838488 -81666065 - AluSp SINE Alu -8 305 1 2298 99 0 13 chr17 7838490 7838804 -81665749 - AluSx SINE Alu -2 310 1 693 334 62 39 chr17 7838804 7838968 -81665585 - L1M4 LINE L1 -1831 4315 4156 786 234 88 19 chr17 7838968 7839173 -81665380 + MER20 DNA MER1_type 1 219 0 693 334 62 39 chr17 7839173 7839239 -81665314 - L1M4 LINE L1 -1990 4156 4093 2382 103 0 0 chr17 7839239 7839551 -81665002 + AluSq SINE Alu 1 312 -1 693 334 62 39 chr17 7839551 7839743 -81664810 - L1M4 LINE L1 -2053 4093 3907 1469 149 65 19 chr17 7839743 7840004 -81664549 - AluJo SINE Alu -39 273 1 693 334 62 39 chr17 7840004 7840328 -81664225 - L1M4 LINE L1 -2239 3907 3522 210 258 0 0 chr17 7842050 7842112 -81662441 + (CA)n Simple_repeat Simple_repeat 1 62 0 289 256 0 58 chr17 7843337 7843493 -81661060 + C-rich Low_complexity Low_complexity 4 150 0 1020 141 39 0 chr17 7843677 7843833 -81660720 - FRAM SINE Alu -16 160 1 253 352 6 22 chr17 7844654 7844833 -81659720 + GA-rich Low_complexity Low_complexity 2 177 0 207 0 0 0 chr17 7844932 7844955 -81659598 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 482 186 0 28 chr17 7845267 7845412 -81659141 + (CA)n Simple_repeat Simple_repeat 2 142 0 1753 134 7 22 chr17 7847091 7847366 -81657187 + AluJb SINE Alu 25 295 -17 1729 113 32 0 chr17 7847395 7847642 -81656911 + AluSx SINE Alu 46 300 -12 262 214 0 57 chr17 7849283 7849419 -81655134 + G-rich Low_complexity Low_complexity 1 128 0 492 165 0 0 chr17 7850245 7850324 -81654229 + FLAM SINE Alu 50 128 -15 2092 105 0 0 chr17 7850328 7850613 -81653940 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr17 7850613 7850634 -81653919 + AT_rich Low_complexity Low_complexity 1 21 0 2228 99 0 6 chr17 7850656 7850969 -81653584 - AluSx SINE Alu 0 312 2 249 288 0 0 chr17 7852427 7852486 -81652067 + L2 LINE L2 3252 3310 -3 189 187 40 13 chr17 7854842 7854917 -81649636 + G-rich Low_complexity Low_complexity 2 78 0 209 192 0 19 chr17 7855177 7855229 -81649324 + GA-rich Low_complexity Low_complexity 3 53 0 224 398 16 8 chr17 7855946 7856069 -81648484 + L3 LINE CR1 1448 1571 -6 21 36 0 0 chr17 7857734 7857762 -81646791 + GC_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 7862175 7862197 -81642356 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 569 222 74 37 chr17 7864381 7864570 -81639983 - MER91A DNA MER1_type 0 196 1 371 261 96 0 chr17 7865776 7865891 -81638662 + L1ME3 LINE L1 5837 5962 -208 303 235 0 121 chr17 7865925 7866091 -81638462 + L1ME3 LINE L1 5940 6085 -77 2054 118 0 3 chr17 7866153 7866450 -81638103 - AluSx SINE Alu -16 296 1 2071 92 64 0 chr17 7868750 7869032 -81635521 + AluSq SINE Alu 1 300 -13 2196 116 10 0 chr17 7869146 7869448 -81635105 + AluSx SINE Alu 1 305 -7 252 346 48 0 chr17 7870139 7870243 -81634310 - MIR SINE MIR -107 155 47 2446 55 7 3 chr17 7870373 7870683 -81633870 + AluY SINE Alu 1 311 0 2158 60 0 18 chr17 7871028 7871313 -81633240 - AluY SINE Alu -13 298 19 24 0 0 0 chr17 7872002 7872026 -81632527 + GC_rich Low_complexity Low_complexity 1 24 0 243 146 0 0 chr17 7873728 7873769 -81630784 + (TTC)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 7875479 7875500 -81629053 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 7875565 7875602 -81628951 + GC_rich Low_complexity Low_complexity 1 37 0 236 326 11 33 chr17 7875859 7876040 -81628513 + C-rich Low_complexity Low_complexity 2 178 0 25 31 0 0 chr17 7877045 7877077 -81627476 + GC_rich Low_complexity Low_complexity 1 32 0 294 98 33 16 chr17 7877082 7877143 -81627410 + CT-rich Low_complexity Low_complexity 1 62 0 2003 125 7 10 chr17 7882455 7882590 -81621963 + AluJo SINE Alu 1 135 -177 2217 108 0 3 chr17 7882590 7882895 -81621658 + AluSg SINE Alu 1 304 -6 2003 125 7 10 chr17 7882895 7883062 -81621491 + AluJo SINE Alu 135 302 -10 2311 87 0 3 chr17 7883067 7883377 -81621176 - AluSg SINE Alu -1 309 1 21 36 0 0 chr17 7883377 7883405 -81621148 + AT_rich Low_complexity Low_complexity 1 28 0 256 297 103 32 chr17 7884980 7885037 -81619516 - MIR SINE MIR 0 262 210 2195 112 0 0 chr17 7885037 7885340 -81619213 - AluSg SINE Alu -1 309 7 256 297 103 32 chr17 7885340 7885437 -81619116 - MIR SINE MIR -52 210 97 328 267 100 0 chr17 7885439 7885559 -81618994 + L2 LINE L2 3174 3305 -8 2395 81 0 0 chr17 7885560 7885867 -81618686 + AluSc SINE Alu 1 307 -2 2274 98 3 3 chr17 7885930 7886236 -81618317 - AluSg SINE Alu -4 306 1 2009 104 35 3 chr17 7887215 7887504 -81617049 + AluSx SINE Alu 1 298 -14 40 67 0 0 chr17 7888884 7888959 -81615594 + GC_rich Low_complexity Low_complexity 1 75 0 296 277 0 50 chr17 7889183 7889284 -81615269 + G-rich Low_complexity Low_complexity 3 98 0 196 321 0 0 chr17 7890647 7890703 -81613850 + L2 LINE L2 3258 3313 0 182 167 0 24 chr17 7890796 7890838 -81613715 - L2 LINE L2 -665 2649 2609 294 331 60 23 chr17 7890849 7890982 -81613571 - L2 LINE L2 -1 3312 3175 2381 64 7 3 chr17 7891293 7891591 -81612962 + AluSp SINE Alu 1 299 -14 352 296 301 10 chr17 7891826 7892022 -81612531 - MIR SINE MIR -2 260 8 224 241 0 0 chr17 7892490 7892544 -81612009 + T-rich Low_complexity Low_complexity 1 54 0 307 330 106 28 chr17 7892605 7892784 -81611769 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7892823 7893119 -81611434 + AluY SINE Alu 1 294 -17 2116 91 24 3 chr17 7893361 7893648 -81610905 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7893652 7893943 -81610610 + AluSg1 SINE Alu 3 300 -9 867 138 0 0 chr17 7894727 7894850 -81609703 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7894884 7894994 -81609559 - MIR SINE MIR -38 224 108 1568 193 10 20 chr17 7895011 7895316 -81609237 - AluJb SINE Alu -10 302 1 2070 123 0 0 chr17 7895369 7895653 -81608900 + AluSg SINE Alu 3 286 -24 437 87 0 0 chr17 7895662 7895731 -81608822 + MER41A LTR ERV1 399 467 -87 2245 114 0 0 chr17 7895746 7896044 -81608509 + AluSx SINE Alu 1 298 -14 24 32 0 0 chr17 7897486 7897517 -81607036 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr17 7899030 7899062 -81605491 + GC_rich Low_complexity Low_complexity 1 32 0 28 79 0 0 chr17 7900094 7900157 -81604396 + GC_rich Low_complexity Low_complexity 1 63 0 1667 164 13 10 chr17 7901182 7901486 -81603067 - AluJb SINE Alu -7 305 1 2234 102 0 10 chr17 7901867 7902170 -81602383 - AluSq SINE Alu -13 300 1 738 204 21 14 chr17 7902239 7902381 -81602172 - FRAM SINE Alu -25 151 9 2199 93 0 3 chr17 7902391 7902680 -81601873 - AluSx SINE Alu -16 296 9 2484 55 0 10 chr17 7902698 7903010 -81601543 - AluY SINE Alu 0 311 3 1836 114 8 4 chr17 7903010 7903264 -81601289 - AluSx SINE Alu -57 255 1 189 0 0 0 chr17 7903270 7903291 -81601262 + (T)n Simple_repeat Simple_repeat 1 21 0 2313 96 0 6 chr17 7903305 7903617 -81600936 - AluSg SINE Alu 0 310 1 715 136 9 0 chr17 7903635 7903745 -81600808 - HY1 scRNA scRNA 0 112 2 265 267 222 11 chr17 7903802 7903982 -81600571 + L2 LINE L2 2531 2748 -566 2082 43 43 43 chr17 7903983 7904298 -81600255 + AluY SINE Alu 1 315 0 532 250 89 72 chr17 7904352 7904712 -81599841 + L2 LINE L2 2869 3234 -79 2198 130 0 9 chr17 7904786 7905101 -81599452 - AluSx SINE Alu 0 312 1 347 273 176 91 chr17 7905102 7905143 -81599410 - L2 LINE L2 -10 3303 3267 1061 164 6 0 chr17 7905143 7905302 -81599251 + FRAM SINE Alu 1 160 -6 2135 109 0 3 chr17 7905308 7905601 -81598952 + AluSg SINE Alu 1 292 -18 2038 88 26 39 chr17 7905609 7905917 -81598636 + AluSg SINE Alu 1 304 -6 2335 94 0 0 chr17 7905917 7906216 -81598337 + AluSq SINE Alu 1 299 -14 347 273 176 91 chr17 7906216 7906443 -81598110 - L2 LINE L2 -56 3257 2982 2165 114 0 13 chr17 7906443 7906750 -81597803 + AluSq SINE Alu 1 303 -10 347 273 176 91 chr17 7906750 7906804 -81597749 - L2 LINE L2 -331 2982 2934 688 180 78 106 chr17 7906857 7907074 -81597479 - MER20 DNA MER1_type 0 219 9 2131 115 10 0 chr17 7907154 7907450 -81597103 + AluSp SINE Alu 1 299 -14 362 286 97 39 chr17 7907459 7907674 -81596879 - L2 LINE L2 -2167 1147 946 1805 148 0 43 chr17 7907674 7907979 -81596574 + AluJb SINE Alu 3 294 -18 2060 75 45 24 chr17 7907979 7908292 -81596261 + AluY SINE Alu 1 311 0 362 286 97 39 chr17 7908292 7908334 -81596219 - L2 LINE L2 -2367 947 874 799 168 29 92 chr17 7908374 7908547 -81596006 + AluSq SINE Alu 1 162 -151 511 66 0 0 chr17 7908549 7908625 -81595928 + Alu SINE Alu 225 300 0 855 164 0 0 chr17 7908636 7908770 -81595783 + AluSg/x SINE Alu 161 294 -18 1979 132 24 0 chr17 7908775 7909064 -81595489 + AluSx SINE Alu 2 297 -15 954 321 106 27 chr17 7909066 7909393 -81595160 - L2 LINE L2 -2474 840 540 2293 91 0 0 chr17 7909393 7909691 -81594862 + AluSg SINE Alu 1 298 -12 2177 76 10 16 chr17 7909691 7909995 -81594558 + AluY SINE Alu 1 302 -9 954 321 106 27 chr17 7909995 7910268 -81594285 - L2 LINE L2 -2773 541 191 284 316 20 7 chr17 7910602 7910754 -81593799 + L1M4 LINE L1 3605 3758 -2388 2107 123 0 16 chr17 7910754 7910891 -81593662 + AluSx SINE Alu 1 139 -173 2176 67 0 0 chr17 7910891 7911161 -81593392 + AluY SINE Alu 37 306 -5 2107 123 0 16 chr17 7911161 7911333 -81593220 + AluSx SINE Alu 139 305 -7 262 316 0 60 chr17 7911333 7911379 -81593174 + L1M4 LINE L1 3844 3891 -2255 2178 116 0 0 chr17 7911379 7911681 -81592872 + AluY SINE Alu 1 302 -9 2438 75 3 0 chr17 7911685 7911991 -81592562 + AluSp SINE Alu 1 307 -6 262 316 0 60 chr17 7911991 7912107 -81592446 + L1M4 LINE L1 3894 4001 -2145 309 264 27 78 chr17 7912137 7912269 -81592284 + L1M4 LINE L1 4075 4212 -1934 2143 118 3 0 chr17 7912269 7912575 -81591978 + AluSg SINE Alu 2 308 -2 309 264 27 78 chr17 7912575 7912628 -81591925 + L1M4 LINE L1 4212 4246 -1900 2114 112 10 0 chr17 7912628 7912933 -81591620 + AluSp SINE Alu 2 309 -4 309 264 27 78 chr17 7912933 7913004 -81591549 + L1M4 LINE L1 4246 4319 -1827 315 122 0 0 chr17 7913067 7913116 -81591437 + (A)n Simple_repeat Simple_repeat 1 49 0 1833 170 23 3 chr17 7913116 7913422 -81591131 + AluJb SINE Alu 1 312 0 1082 331 66 64 chr17 7913429 7913455 -81591098 + L1M4 LINE L1 4345 4369 -1777 1942 127 0 3 chr17 7913455 7913760 -81590793 + AluSg SINE Alu 1 304 0 1082 331 66 64 chr17 7913760 7913989 -81590564 + L1M4 LINE L1 4369 4596 -1550 2082 121 0 3 chr17 7913989 7914287 -81590266 + AluSq SINE Alu 1 297 -16 1082 331 66 64 chr17 7914287 7914438 -81590115 + L1M4 LINE L1 4596 4745 -1401 2221 108 3 6 chr17 7914438 7914752 -81589801 + AluSq SINE Alu 1 313 0 1082 331 66 64 chr17 7914752 7915160 -81589393 + L1M4 LINE L1 4745 5167 -979 2022 138 0 0 chr17 7915160 7915457 -81589096 + AluSx SINE Alu 1 297 -15 1082 331 66 64 chr17 7915457 7915543 -81589010 + L1M4 LINE L1 5167 5251 -895 2287 104 3 0 chr17 7915550 7915858 -81588695 - AluSp SINE Alu -4 309 1 2163 89 0 0 chr17 7915869 7916175 -81588378 - AluY SINE Alu 0 306 1 2148 113 7 0 chr17 7916267 7916569 -81587984 + AluSx SINE Alu 1 304 -8 730 225 33 0 chr17 7916665 7916816 -81587737 + AluJb SINE Alu 140 295 -17 2163 110 3 7 chr17 7916818 7917127 -81587426 + AluSp SINE Alu 2 309 -4 2072 118 10 0 chr17 7917301 7917597 -81586956 - AluSx SINE Alu -13 299 1 205 362 92 28 chr17 7917916 7918134 -81586419 - L2 LINE L2 -708 2606 2375 304 268 27 80 chr17 7920412 7920524 -81584029 - MIR SINE MIR -75 187 82 220 261 0 0 chr17 7924451 7924497 -81580056 + C-rich Low_complexity Low_complexity 2 47 0 2292 68 13 7 chr17 7924695 7925002 -81579551 - AluY SINE Alu -1 310 2 1911 118 28 14 chr17 7926446 7926735 -81577818 - AluSx SINE Alu -13 299 7 959 154 91 11 chr17 7929142 7929317 -81575236 - MER5A DNA MER1_type 0 189 1 376 306 11 17 chr17 7931937 7932117 -81572436 + (CCG)n Simple_repeat Simple_repeat 2 180 0 21 36 0 0 chr17 7932324 7932352 -81572201 + GC_rich Low_complexity Low_complexity 1 28 0 943 86 0 0 chr17 7932831 7932959 -81571594 - AluSg/x SINE Alu 0 312 185 1976 99 7 3 chr17 7933055 7933357 -81571196 - AluSx SINE Alu 0 303 1 243 215 32 75 chr17 7933482 7933575 -81570978 + L2 LINE L2 2910 2998 -315 319 298 144 21 chr17 7933605 7933793 -81570760 + L2 LINE L2 3102 3312 -1 258 56 0 0 chr17 7933865 7933914 -81570639 + Alu SINE Alu 1 34 -266 2316 112 0 3 chr17 7934590 7934904 -81569649 + AluSq SINE Alu 1 313 0 1935 106 6 45 chr17 7934918 7935055 -81569498 + AluSx SINE Alu 1 142 -170 2085 78 13 42 chr17 7935055 7935362 -81569191 + AluY SINE Alu 1 298 -13 1935 106 6 45 chr17 7935362 7935536 -81569017 + AluSx SINE Alu 142 300 -12 1509 74 79 0 chr17 7935538 7935741 -81568812 + AluY SINE Alu 1 219 -92 1891 141 0 0 chr17 7935841 7936117 -81568436 - AluSx SINE Alu -36 276 1 1809 149 17 7 chr17 7936194 7936496 -81568057 - AluJb SINE Alu -7 305 1 668 267 172 9 chr17 7936602 7936934 -81567619 + MLT1G3 LTR MaLR 8 357 -173 2426 57 0 0 chr17 7937072 7937368 -81567185 + AluY SINE Alu 1 296 -15 395 328 111 16 chr17 7937570 7937759 -81566794 - L2 LINE L2 0 3313 3107 1207 131 0 0 chr17 7937804 7937979 -81566574 - AluSg/x SINE Alu -4 306 132 1953 59 4 0 chr17 7937979 7938217 -81566336 - AluSx SINE Alu -15 297 59 1824 146 0 55 chr17 7938394 7938544 -81566009 + AluJo SINE Alu 1 125 -187 2268 90 7 0 chr17 7938544 7938844 -81565709 + AluSg SINE Alu 1 302 -8 1824 146 0 55 chr17 7938844 7939021 -81565532 + AluJo SINE Alu 125 310 -2 2017 108 4 0 chr17 7939180 7939481 -81565072 + AluSx SINE Alu 6 307 0 235 340 65 39 chr17 7939574 7939806 -81564747 - L2 LINE L2 -224 3048 2811 196 322 163 56 chr17 7939798 7940031 -81564522 - L2 LINE L2 -763 2551 2294 * 1843 87 4 12 chr17 7940122 7940375 -81564178 + AluSc SINE Alu 1 251 -58 545 302 42 0 chr17 7940490 7940679 -81563874 + MIR SINE MIR 6 202 -60 380 295 0 0 chr17 7940679 7940791 -81563762 + MLT1F LTR MaLR 1 112 -430 752 220 19 3 chr17 7940796 7940965 -81563588 + MLT1F LTR MaLR 65 281 -314 2143 97 7 0 chr17 7940965 7941254 -81563299 + AluSx SINE Alu 1 291 -21 268 379 0 24 chr17 7941295 7941419 -81563134 - MIR SINE MIR -108 154 34 2071 136 0 0 chr17 7941504 7941799 -81562754 + AluSx SINE Alu 1 295 -17 229 322 89 0 chr17 7941837 7941927 -81562626 - L2 LINE L2 -46 3226 3129 233 307 74 61 chr17 7941943 7942106 -81562447 + L2 LINE L2 3037 3201 -112 1951 141 10 13 chr17 7942975 7943109 -81561444 + AluJb SINE Alu 1 134 -178 2191 105 0 25 chr17 7943109 7943423 -81561130 + AluSx SINE Alu 1 306 -6 1951 141 10 13 chr17 7943423 7943600 -81560953 + AluJb SINE Alu 134 311 -1 2014 157 0 0 chr17 7944209 7944508 -81560045 + AluSx SINE Alu 1 299 -13 2578 174 32 100 chr17 7944508 7944627 -81559926 + L1ME1 LINE L1 5429 5555 -611 1602 211 0 13 chr17 7944627 7944931 -81559622 + AluJo SINE Alu 1 300 -12 2232 78 0 7 chr17 7944933 7945257 -81559296 + AluY SINE Alu 1 322 0 2168 111 0 0 chr17 7945257 7945545 -81559008 + AluSx SINE Alu 2 289 -23 2107 85 32 3 chr17 7945554 7945837 -81558716 + AluSq SINE Alu 1 291 -22 2578 174 32 100 chr17 7945837 7945928 -81558625 + L1ME1 LINE L1 5563 5659 -507 2346 70 0 13 chr17 7945928 7946230 -81558323 + AluY SINE Alu 1 298 -13 2578 174 32 100 chr17 7946230 7946790 -81557763 + L1ME1 LINE L1 5659 6161 -5 1826 100 85 18 chr17 7946908 7947189 -81557364 + AluSq SINE Alu 1 300 -13 1584 218 26 71 chr17 7947351 7947841 -81556712 + MER21B LTR ERV1 1 468 -395 207 100 0 0 chr17 7947846 7947876 -81556677 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 2136 136 7 0 chr17 7947876 7948185 -81556368 - AluSx SINE Alu -1 311 1 1053 99 0 0 chr17 7948191 7948333 -81556220 - AluJb SINE Alu -170 142 1 1222 210 48 12 chr17 7948333 7948666 -81555887 + MER21B LTR ERV1 461 805 -58 219 349 92 0 chr17 7948809 7948918 -81555635 + L2 LINE L2 2705 2823 -491 * 330 248 165 0 chr17 7948897 7949006 -81555547 + L2 LINE L2 3146 3272 0 217 215 0 159 chr17 7949185 7949292 -81555261 + L2 LINE L2 2946 3035 -237 2261 101 0 0 chr17 7949293 7949591 -81554962 - AluSq SINE Alu -15 298 1 290 179 0 0 chr17 7949778 7949834 -81554719 + FLAM_A SINE Alu 11 66 -67 299 302 32 16 chr17 7949910 7950036 -81554517 + L1MEd LINE L1 561 688 -5431 890 209 12 0 chr17 7950050 7950222 -81554331 + FAM SINE Alu 1 46 -3 241 182 121 0 chr17 7950225 7950291 -81554262 + L1MEd LINE L1 682 755 -5364 368 306 64 25 chr17 7950507 7950638 -81553915 + L1M4 LINE L1 2662 2801 -4048 1849 167 23 3 chr17 7950638 7950944 -81553609 + AluJb SINE Alu 1 312 0 368 306 64 25 chr17 7950944 7950969 -81553584 + L1M4 LINE L1 2801 2824 -4025 * 551 332 66 19 chr17 7950951 7950977 -81553576 + L1M4 LINE L1 5047 5070 -1778 1942 127 0 3 chr17 7950977 7951286 -81553267 + AluSg SINE Alu 1 308 0 551 332 66 19 chr17 7951286 7951514 -81553039 + L1M4 LINE L1 5070 5314 -1534 2068 124 0 3 chr17 7951515 7951813 -81552740 + AluSq SINE Alu 1 297 -16 2207 100 3 7 chr17 7951964 7952264 -81552289 + AluSq SINE Alu 1 299 -14 352 296 301 10 chr17 7952505 7952701 -81551852 - MIR SINE MIR -2 260 8 215 245 0 0 chr17 7953169 7953222 -81551331 + T-rich Low_complexity Low_complexity 1 53 0 307 330 106 28 chr17 7953283 7953462 -81551091 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7953501 7953797 -81550756 + AluY SINE Alu 1 294 -17 2081 90 24 7 chr17 7954039 7954327 -81550226 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7954331 7954622 -81549931 + AluSg1 SINE Alu 3 300 -9 841 146 0 0 chr17 7955406 7955529 -81549024 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7955563 7955673 -81548880 - MIR SINE MIR -38 224 108 423 349 43 30 chr17 7957189 7957421 -81547132 + MIR SINE MIR 17 251 -11 1860 163 0 0 chr17 7960829 7961129 -81543424 + AluJb SINE Alu 1 300 -12 1195 133 0 11 chr17 7962854 7963034 -81541519 + AluJo SINE Alu 3 180 -132 335 309 149 54 chr17 7964696 7964778 -81539775 - L2 LINE L2 -74 3239 3166 2259 67 27 3 chr17 7964778 7965078 -81539475 - AluSc SINE Alu -2 307 1 335 309 149 54 chr17 7965078 7965364 -81539189 - L2 LINE L2 -147 3166 2836 23 33 0 0 chr17 7966442 7966472 -81538081 + GC_rich Low_complexity Low_complexity 1 30 0 22 88 0 0 chr17 7966523 7966580 -81537973 + GC_rich Low_complexity Low_complexity 1 57 0 243 321 12 0 chr17 7967125 7967209 -81537344 + GA-rich Low_complexity Low_complexity 6 90 0 182 256 0 0 chr17 7969289 7969328 -81535225 - L2 LINE L2 -3023 291 253 207 100 0 0 chr17 7969512 7969542 -81535011 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr17 7969715 7969735 -81534818 + (A)n Simple_repeat Simple_repeat 1 20 0 327 341 93 48 chr17 7971088 7971523 -81533030 + L1MEd LINE L1 814 1256 -4863 276 130 0 0 chr17 7974219 7974265 -81530288 + (CCG)n Simple_repeat Simple_repeat 3 48 0 2184 85 23 3 chr17 7975192 7975499 -81529054 + AluSp SINE Alu 1 313 0 2213 62 10 16 chr17 7975513 7975819 -81528734 + AluSg SINE Alu 1 304 -6 2249 96 3 3 chr17 7976026 7976338 -81528215 + AluSx SINE Alu 1 312 0 212 307 27 0 chr17 7976375 7976450 -81528103 + MIR SINE MIR 84 160 -102 1228 199 12 72 chr17 7976494 7976815 -81527738 + AluJo SINE Alu 1 302 -10 228 35 0 0 chr17 7976939 7976968 -81527585 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 299 227 21 31 chr17 7977016 7977113 -81527440 + L1M4 LINE L1 5587 5682 -492 1559 102 13 0 chr17 7977117 7977343 -81527210 + AluY SINE Alu 1 229 -82 186 278 97 0 chr17 7977444 7977516 -81527037 + MIR SINE MIR 128 206 -56 2109 105 0 3 chr17 7977532 7977828 -81526725 - AluSx SINE Alu -17 295 1 1575 153 41 57 chr17 7979297 7979611 -81524942 - AluJo SINE Alu -3 309 1 4329 183 36 46 chr17 7980214 7981177 -81523376 + LTR13 LTR ERVK 1 954 0 2203 110 0 3 chr17 7981907 7982216 -81522337 - AluSg SINE Alu -1 309 2 2155 119 0 0 chr17 7982227 7982530 -81522023 - AluSx SINE Alu -4 308 6 224 226 30 83 chr17 7984428 7984561 -81519992 + G-rich Low_complexity Low_complexity 6 131 0 1730 186 3 0 chr17 7985051 7985342 -81519211 + AluJo SINE Alu 1 292 -20 833 272 92 13 chr17 7985645 7986140 -81518413 - L2 LINE L2 -69 3244 2709 385 214 0 0 chr17 7986156 7986226 -81518327 - MER91B DNA MER1_type -1 189 120 1995 164 0 0 chr17 7986235 7986547 -81518006 - AluSx SINE Alu 0 312 1 2011 117 7 10 chr17 7986566 7986866 -81517687 - AluSx SINE Alu 0 312 14 340 302 69 25 chr17 7986867 7987026 -81517527 - MER91B DNA MER1_type -13 177 12 239 209 0 75 chr17 7989416 7989483 -81515070 - L2 LINE L2 -18 3254 3193 450 273 120 34 chr17 7990218 7990303 -81514250 + MIR SINE MIR 1 77 -185 2334 64 7 0 chr17 7990303 7990598 -81513955 - AluY SINE Alu -14 297 1 450 273 120 34 chr17 7990598 7990721 -81513832 + MIR SINE MIR 77 227 -35 2412 40 0 13 chr17 7991533 7991833 -81512720 - AluSc SINE Alu -13 296 1 270 247 12 49 chr17 7992014 7992095 -81512458 - L2 LINE L2 0 3313 3236 30 45 0 0 chr17 7992992 7993036 -81511517 + GC_rich Low_complexity Low_complexity 1 44 0 1012 177 21 0 chr17 7997896 7998088 -81506465 + MER20 DNA MER1_type 1 196 -23 730 120 16 0 chr17 7998108 7998233 -81506320 + GA-rich Low_complexity Low_complexity 3 129 0 434 259 28 0 chr17 7998449 7998557 -81505996 - MER5B DNA MER1_type -5 173 63 2343 99 3 0 chr17 7998660 7998972 -81505581 - AluSq SINE Alu 0 313 1 47 14 0 29 chr17 7998983 7999019 -81505534 + AT_rich Low_complexity Low_complexity 1 36 -31 2162 114 3 0 chr17 7999019 7999316 -81505237 - AluSx SINE Alu -14 298 1 47 14 0 29 chr17 7999316 7999348 -81505205 + AT_rich Low_complexity Low_complexity 36 67 0 717 217 0 0 chr17 7999348 7999468 -81505085 - FLAM_C SINE Alu -23 120 1 276 272 0 87 chr17 7999495 7999587 -81504966 - MIR3 SINE MIR -49 159 76 21 0 0 0 chr17 8050508 8050529 -81454024 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 8051518 8051546 -81453007 + AT_rich Low_complexity Low_complexity 1 28 0 33 56 0 0 chr17 8052163 8052217 -81452336 + AT_rich Low_complexity Low_complexity 1 54 0 2008 164 66 94 chr17 8052543 8053072 -81451481 - LTR8A LTR ERV1 0 727 214 1114 188 0 0 chr17 8053205 8053423 -81451130 + L1 LINE L1 3592 3809 -2337 22 35 0 0 chr17 8053748 8053777 -81450776 + AT_rich Low_complexity Low_complexity 1 29 0 622 282 106 18 chr17 8053897 8054124 -81450429 + MLT1D LTR MaLR 259 505 0 266 132 19 0 chr17 8054295 8054348 -81450205 + (TA)n Simple_repeat Simple_repeat 1 54 0 1894 171 68 11 chr17 8054355 8054706 -81449847 - MSTB LTR MaLR -55 371 1 687 169 16 0 chr17 8054706 8054830 -81449723 - MSTB-int LTR MaLR 0 1651 1526 358 296 45 0 chr17 8054937 8055069 -81449484 + MIR SINE MIR 121 258 -4 204 40 0 0 chr17 8055266 8055291 -81449262 + (T)n Simple_repeat Simple_repeat 1 25 0 326 317 102 18 chr17 8055697 8055864 -81448689 - MIR3 SINE MIR -3 205 25 31 26 0 0 chr17 8056171 8056209 -81448344 + AT_rich Low_complexity Low_complexity 1 38 0 229 265 44 0 chr17 8056690 8056758 -81447795 + MIR SINE MIR 129 199 -63 661 144 23 0 chr17 8056883 8057015 -81447538 - L1MD1 LINE L1 -1 6241 6107 879 95 0 0 chr17 8057115 8057255 -81447298 + AluSg/x SINE Alu 168 307 0 2168 105 4 0 chr17 8057470 8057747 -81446806 - AluSq SINE Alu -35 278 1 816 103 52 0 chr17 8058371 8058517 -81446036 + AluY SINE Alu 163 314 0 2269 105 10 0 chr17 8058582 8058878 -81445675 - AluSq SINE Alu -14 299 1 450 267 116 0 chr17 8058878 8059024 -81445529 + MIR SINE MIR 97 259 -3 606 273 34 59 chr17 8059043 8059281 -81445272 - MIR SINE MIR -14 248 17 564 94 0 24 chr17 8059347 8059432 -81445121 + AluS SINE Alu 2 84 -229 293 229 10 52 chr17 8059432 8059528 -81445025 - L2 LINE L2 -414 2899 2808 2270 118 0 13 chr17 8059700 8060015 -81444538 - AluSx SINE Alu -1 311 1 679 232 24 66 chr17 8060403 8060474 -81444079 - L2 LINE L2 -538 2776 2704 2284 118 0 6 chr17 8060474 8060788 -81443765 - AluSx SINE Alu 0 312 1 679 232 24 66 chr17 8060788 8060927 -81443626 - L2 LINE L2 -610 2704 2575 1250 172 98 8 chr17 8060927 8061171 -81443382 + MER66B LTR ERV1 1 266 -220 2034 137 7 3 chr17 8061171 8061464 -81443089 + AluSx SINE Alu 1 294 -18 246 175 79 0 chr17 8061471 8061534 -81443019 - L2 LINE L2 -907 2407 2340 2290 109 3 3 chr17 8061535 8061846 -81442707 - AluSq SINE Alu -2 311 1 1448 157 7 19 chr17 8061967 8062265 -81442288 + MER61C LTR ERV1 17 404 -30 887 255 40 6 chr17 8062266 8062363 -81442190 + L1M4 LINE L1 1368 1460 -5082 2352 89 0 43 chr17 8062363 8062689 -81441864 + AluSx SINE Alu 1 312 0 887 255 40 6 chr17 8062689 8062913 -81441640 + L1M4 LINE L1 1460 1700 -4842 * 1085 204 28 34 chr17 8062894 8062926 -81441627 + L1MB8 LINE L1 5709 5740 -438 2238 107 10 7 chr17 8062926 8063236 -81441317 + AluSx SINE Alu 1 311 -1 1085 204 28 34 chr17 8063236 8063527 -81441026 + L1MB8 LINE L1 5740 6030 -148 2291 102 10 13 chr17 8063527 8063832 -81440721 - AluSg SINE Alu -6 304 1 1852 120 25 11 chr17 8063832 8064114 -81440439 - AluSq SINE Alu -5 308 22 823 109 0 0 chr17 8064214 8064324 -81440229 + AluSg/x SINE Alu 192 301 -8 2076 94 3 74 chr17 8064340 8064649 -81439904 + AluSq SINE Alu 16 302 -11 674 243 36 61 chr17 8064672 8064772 -81439781 - MIR SINE MIR -20 242 141 1981 83 55 0 chr17 8064772 8065026 -81439527 - AluSq SINE Alu -45 268 1 674 243 36 61 chr17 8065026 8065172 -81439381 - MIR SINE MIR -121 141 2 229 347 90 33 chr17 8065258 8065655 -81438898 + L2 LINE L2 2457 2901 -371 721 204 0 0 chr17 8065655 8065787 -81438766 + FLAM_A SINE Alu 1 132 -1 229 347 90 33 chr17 8065787 8065965 -81438588 + L2 LINE L2 2901 3067 -205 841 276 43 16 chr17 8066190 8066444 -81438109 + MIR SINE MIR 2 262 0 257 289 33 8 chr17 8068815 8068885 -81435668 + C-rich Low_complexity Low_complexity 1 77 -47 204 40 0 0 chr17 8068885 8068910 -81435643 + (CCG)n Simple_repeat Simple_repeat 3 27 0 257 289 33 8 chr17 8068910 8068960 -81435593 + C-rich Low_complexity Low_complexity 77 124 0 180 0 0 0 chr17 8068979 8068999 -81435554 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2658 39 0 3 chr17 8069727 8070033 -81434520 + AluY SINE Alu 1 305 -6 2057 110 7 29 chr17 8070162 8070470 -81434083 + AluSp SINE Alu 1 301 -12 1222 145 0 6 chr17 8070470 8070649 -81433904 + AluSp SINE Alu 134 311 -2 696 283 85 63 chr17 8074508 8074727 -81429826 - L2 LINE L2 -13 3300 3087 1880 82 0 0 chr17 8074727 8074993 -81429560 - AluSx SINE Alu 0 319 54 698 101 14 79 chr17 8074999 8075138 -81429415 - FLAM_C SINE Alu 0 133 4 696 283 85 63 chr17 8075138 8075594 -81428959 - L2 LINE L2 -230 3083 2583 308 278 56 0 chr17 8075716 8075806 -81428747 + L1ME LINE L1 4959 5053 -1093 566 264 148 28 chr17 8075932 8076301 -81428252 + L1ME LINE L1 5144 5583 -833 2232 109 7 0 chr17 8076301 8076595 -81427958 - AluSq SINE Alu -17 296 1 566 264 148 28 chr17 8076595 8076672 -81427881 + L1ME LINE L1 5583 5649 -767 878 307 118 33 chr17 8076694 8077292 -81427261 + L2 LINE L2 2370 2916 -397 1471 104 54 117 chr17 8077292 8077408 -81427145 - AluJo SINE Alu -15 297 175 2046 129 7 0 chr17 8077408 8077688 -81426865 + AluSg SINE Alu 17 298 -12 2533 67 0 0 chr17 8077688 8077987 -81426566 + AluY SINE Alu 1 299 -12 1471 104 54 117 chr17 8077987 8078186 -81426367 - AluJo SINE Alu -135 177 1 878 307 118 33 chr17 8078186 8078451 -81426102 + L2 LINE L2 2916 3313 0 378 340 49 14 chr17 8078452 8078596 -81425957 + L1ME LINE L1 5653 5801 -320 1614 204 104 49 chr17 8078613 8079073 -81425480 + MER119 DNA MER1_type 5 501 -82 1962 138 7 10 chr17 8079073 8079363 -81425190 - AluSx SINE Alu -23 289 1 1614 204 104 49 chr17 8079363 8079451 -81425102 + MER119 DNA MER1_type 501 583 0 736 145 0 30 chr17 8079549 8079680 -81424873 + FLAM_C SINE Alu 9 135 -8 1462 186 0 0 chr17 8079682 8079918 -81424635 + AluSq SINE Alu 1 236 -77 2121 127 0 17 chr17 8080449 8080749 -81423804 - AluSg SINE Alu -15 295 1 1076 96 0 0 chr17 8080749 8080885 -81423668 - AluSq/x SINE Alu -176 136 1 642 290 125 8 chr17 8080981 8081229 -81423324 - L2 LINE L2 -4 3268 2992 2166 134 16 0 chr17 8081575 8081882 -81422671 + AluSx SINE Alu 1 312 0 540 298 110 44 chr17 8082468 8082787 -81421766 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr17 8082966 8083006 -81421547 + AT_rich Low_complexity Low_complexity 1 40 0 207 343 127 6 chr17 8083014 8083180 -81421373 - L2 LINE L2 -604 2710 2525 417 63 48 16 chr17 8083210 8083273 -81421280 + Alu SINE Alu 227 291 -20 226 381 58 17 chr17 8083503 8083676 -81420877 - L2 LINE L2 -905 2409 2230 548 163 163 57 chr17 8083683 8083824 -81420729 - Tigger1 DNA MER2_type 0 2418 2263 2467 89 0 7 chr17 8083827 8084130 -81420423 - AluSx SINE Alu -11 301 1 2364 84 20 0 chr17 8084296 8084595 -81419958 + AluSc SINE Alu 1 305 -4 286 245 70 77 chr17 8086424 8086567 -81417986 + MIR SINE MIR 47 188 -74 2196 111 0 26 chr17 8087935 8088241 -81416312 - AluSx SINE Alu -8 304 7 2631 50 0 3 chr17 8089182 8089483 -81415070 + AluY SINE Alu 1 300 -11 1997 146 7 0 chr17 8089491 8089778 -81414775 + AluSq SINE Alu 1 289 -24 343 351 17 41 chr17 8093208 8093462 -81411091 - MIR SINE MIR 0 262 16 1905 97 43 18 chr17 8093500 8093778 -81410775 + AluSg SINE Alu 1 285 -25 26 0 0 0 chr17 8093916 8093942 -81410611 + AT_rich Low_complexity Low_complexity 1 26 0 3175 183 47 23 chr17 8093950 8093997 -81410556 + L1MB7 LINE L1 4456 4500 -1646 2082 112 14 0 chr17 8093997 8094293 -81410260 + AluSp SINE Alu 1 300 -13 3175 183 47 23 chr17 8094293 8095118 -81409435 + L1MB7 LINE L1 4500 5349 -797 2243 105 3 0 chr17 8095120 8095426 -81409127 + AluSp SINE Alu 1 307 -6 1077 45 0 8 chr17 8095428 8095560 -81408993 + AluY SINE Alu 1 131 -180 1779 180 91 36 chr17 8095565 8096037 -81408516 + L1MB7 LINE L1 5329 5826 -358 1543 151 50 14 chr17 8096050 8096328 -81408225 + AluSx SINE Alu 8 295 -17 1742 159 28 14 chr17 8096337 8096627 -81407926 + AluJb SINE Alu 1 294 -18 706 210 0 0 chr17 8096655 8096774 -81407779 + FLAM_C SINE Alu 1 119 -24 320 164 27 14 chr17 8096778 8096851 -81407702 + L1MC3 LINE L1 5850 5923 -1862 2152 93 7 14 chr17 8096969 8097260 -81407293 + AluSx SINE Alu 1 289 -23 186 217 87 58 chr17 8097557 8097626 -81406927 + L2 LINE L2 2159 2229 -1085 2145 127 0 3 chr17 8097811 8098119 -81406434 + AluSq SINE Alu 3 309 -4 1511 64 11 0 chr17 8099010 8099197 -81405356 + AluSp SINE Alu 1 189 -124 2224 96 10 0 chr17 8099630 8099931 -81404622 + AluSp SINE Alu 1 304 -9 671 162 0 9 chr17 8100254 8100365 -81404188 + AluSp SINE Alu 190 299 -14 383 276 0 42 chr17 8102462 8102781 -81401772 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 200 324 0 41 chr17 8103178 8103348 -81401205 + (CCCA)n Simple_repeat Simple_repeat 1 163 0 246 307 57 11 chr17 8104026 8104114 -81400439 - L2 LINE L2 -27 3286 3195 243 295 57 16 chr17 8104143 8104265 -81400288 - L1ME4a LINE L1 -28 6093 5967 2008 135 10 3 chr17 8104479 8104783 -81399770 - AluSx SINE Alu -6 306 1 349 186 21 52 chr17 8104785 8104882 -81399671 - L1MDa LINE L1 -4595 1945 1852 297 184 23 46 chr17 8104892 8104979 -81399574 - LTR9 LTR ERV1 -86 526 442 315 281 79 14 chr17 8104992 8105131 -81399422 - L1MDa LINE L1 -4707 1833 1686 234 185 37 0 chr17 8105131 8105185 -81399368 - MLT2B2 LTR ERVL 0 515 460 2053 189 23 63 chr17 8105279 8105754 -81398799 - MLT2B2 LTR ERVL -58 457 2 307 304 41 50 chr17 8105756 8105855 -81398698 - L1MDa LINE L1 -4853 1687 1589 2262 91 0 0 chr17 8105855 8106152 -81398401 - AluY SINE Alu -14 297 1 307 304 41 50 chr17 8106152 8106272 -81398281 - L1MDa LINE L1 -4951 1589 1470 1924 127 9 51 chr17 8106277 8106593 -81397960 - AluSx SINE Alu -9 303 1 192 40 0 0 chr17 8106603 8106628 -81397925 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2444 60 0 0 chr17 8106657 8106958 -81397595 - AluY SINE Alu -10 301 1 879 227 152 4 chr17 8106961 8107225 -81397328 + MER82 DNA MER2_type 351 653 0 1859 151 14 0 chr17 8107292 8107577 -81396976 - AluJb SINE Alu -23 289 1 1995 129 23 7 chr17 8107584 8107887 -81396666 - AluSc SINE Alu -1 308 1 306 230 69 46 chr17 8107892 8107979 -81396574 - L1M4 LINE L1 -3173 2973 2885 381 43 0 0 chr17 8107990 8108037 -81396516 + (TA)n Simple_repeat Simple_repeat 2 48 0 1880 124 9 46 chr17 8108037 8108350 -81396203 - AluSx SINE Alu -8 304 2 485 271 76 38 chr17 8108414 8108505 -81396048 - L1M4 LINE L1 -3700 2446 2360 2239 114 0 0 chr17 8108505 8108811 -81395742 - AluSx SINE Alu -6 306 1 485 271 76 38 chr17 8108811 8109033 -81395520 - L1M4 LINE L1 -3786 2360 2121 32 67 0 0 chr17 8109189 8109249 -81395304 + AT_rich Low_complexity Low_complexity 1 60 0 804 226 6 0 chr17 8109268 8109432 -81395121 + AluJb SINE Alu 121 285 -27 21 0 0 0 chr17 8110088 8110109 -81394444 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 8110316 8110337 -81394216 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 8112412 8112440 -81392113 + GC_rich Low_complexity Low_complexity 1 28 0 206 175 0 18 chr17 8112459 8112516 -81392037 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr17 8112949 8112970 -81391583 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 30 27 0 0 chr17 8113959 8113996 -81390557 + GC_rich Low_complexity Low_complexity 1 37 0 237 33 0 0 chr17 8115083 8115113 -81389440 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr17 8115313 8115377 -81389176 + C-rich Low_complexity Low_complexity 5 68 0 891 143 0 0 chr17 8116451 8116584 -81387969 - AluSq/x SINE Alu -179 133 1 282 285 49 8 chr17 8120361 8120484 -81384069 + MER112 DNA MER1_type 34 161 -99 507 17 0 0 chr17 8120484 8120544 -81384009 + (TG)n Simple_repeat Simple_repeat 1 60 0 568 165 0 52 chr17 8120548 8120663 -81383890 - FLAM_C SINE Alu -34 109 1 275 268 12 0 chr17 8120663 8120745 -81383808 + MER112 DNA MER1_type 166 248 -12 398 348 6 25 chr17 8120750 8120908 -81383645 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr17 8121141 8121184 -81383369 + GC_rich Low_complexity Low_complexity 1 43 0 2210 97 16 3 chr17 8121967 8122275 -81382278 + AluSq SINE Alu 2 313 0 2287 83 3 3 chr17 8122276 8122577 -81381976 + AluSq SINE Alu 1 301 -12 2508 53 0 0 chr17 8123277 8123576 -81380977 - AluY SINE Alu -12 299 1 822 169 0 0 chr17 8123692 8123816 -81380737 + AluJb SINE Alu 162 285 -27 855 145 0 0 chr17 8123820 8123944 -81380609 - FLAM_C SINE Alu -19 124 1 2344 86 3 0 chr17 8124550 8124854 -81379699 - AluSq SINE Alu -8 305 1 2490 49 3 0 chr17 8125801 8126108 -81378445 - AluSx SINE Alu -4 308 1 417 276 32 32 chr17 8126751 8126790 -81377763 + L2 LINE L2 3190 3228 -85 2399 65 3 0 chr17 8126790 8127084 -81377469 + AluSp SINE Alu 1 295 -18 417 276 32 32 chr17 8127084 8127167 -81377386 + L2 LINE L2 3227 3312 -1 791 186 0 0 chr17 8127210 8127339 -81377214 + FLAM_C SINE Alu 2 130 -3 330 282 64 9 chr17 8127536 8127646 -81376907 + MIR SINE MIR 96 211 -51 2129 102 0 0 chr17 8127724 8128009 -81376544 - AluSg SINE Alu -9 301 17 867 142 0 0 chr17 8128112 8128232 -81376321 - FLAM_C SINE Alu -23 120 1 2230 103 7 0 chr17 8128261 8128562 -81375991 + AluSq SINE Alu 3 305 -8 210 200 20 0 chr17 8129746 8129796 -81374757 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 141 0 0 chr17 8132774 8132845 -81371708 + (TCC)n Simple_repeat Simple_repeat 2 72 0 740 83 28 0 chr17 8134098 8134206 -81370347 + AluSg/x SINE Alu 201 311 -1 2289 85 0 29 chr17 8134309 8134625 -81369928 + AluSx SINE Alu 1 307 -5 2557 50 0 0 chr17 8134629 8134931 -81369622 + AluY SINE Alu 2 303 -8 2053 97 13 32 chr17 8134932 8135243 -81369310 + AluSg SINE Alu 2 306 -4 615 152 20 0 chr17 8135243 8135342 -81369211 - AluJo/FLAM SINE Alu -187 125 25 432 161 0 0 chr17 8136221 8136302 -81368251 + GA-rich Low_complexity Low_complexity 3 83 0 2224 77 0 26 chr17 8137841 8138151 -81366402 + AluSq SINE Alu 1 302 -11 817 111 8 0 chr17 8138921 8139038 -81365515 - AluSg/x SINE Alu -13 299 182 1817 125 22 47 chr17 8139570 8139889 -81364664 + AluSx SINE Alu 1 311 -1 2182 103 3 0 chr17 8139891 8140192 -81364361 + AluSc SINE Alu 1 302 -7 2044 143 0 0 chr17 8140204 8140498 -81364055 + AluJo SINE Alu 1 294 -18 2159 109 0 7 chr17 8140500 8140802 -81363751 + AluSq SINE Alu 1 300 -13 439 353 0 0 chr17 8140806 8140928 -81363625 - MIR SINE MIR -136 126 5 322 331 190 0 chr17 8140981 8141123 -81363430 - MER91A DNA MER1_type -22 174 6 1271 152 0 14 chr17 8141279 8141489 -81363064 - AluJo SINE Alu -19 293 87 198 329 0 14 chr17 8141492 8141565 -81362988 - MIR SINE MIR -21 241 170 657 197 16 8 chr17 8141749 8141871 -81362682 + MIR SINE MIR 76 198 -64 425 295 98 6 chr17 8142095 8142278 -81362275 + L2 LINE L2 2942 3141 -172 2320 81 0 0 chr17 8142279 8142577 -81361976 - AluSg SINE Alu -12 298 1 926 135 0 14 chr17 8142578 8142719 -81361834 - AluSq/x SINE Alu -173 139 1 1840 166 3 10 chr17 8142720 8143033 -81361520 - AluJb SINE Alu -1 311 1 2055 78 0 32 chr17 8143040 8143200 -81361353 - AluSx SINE Alu -15 297 148 2413 56 0 10 chr17 8143200 8143503 -81361050 - AluY SINE Alu -11 300 1 2055 78 0 32 chr17 8143503 8143626 -81360927 - AluSx SINE Alu -164 148 23 1713 179 0 10 chr17 8143637 8143938 -81360615 - AluJb SINE Alu -14 298 1 2068 115 0 38 chr17 8143993 8144307 -81360246 - AluSx SINE Alu -8 304 3 1782 167 3 10 chr17 8144309 8144609 -81359944 - AluJb SINE Alu -14 298 1 332 241 0 80 chr17 8144610 8144722 -81359831 + L2 LINE L2 3210 3312 -1 821 93 0 0 chr17 8144821 8144928 -81359625 + AluSq/x SINE Alu 1 107 -205 430 341 0 0 chr17 8146967 8147143 -81357410 + (CTGGGG)n Simple_repeat Simple_repeat 3 178 0 214 278 17 17 chr17 8147183 8147298 -81357255 + (CTGGGG)n Simple_repeat Simple_repeat 1 115 0 356 309 6 23 chr17 8147318 8147493 -81357060 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 1857 100 55 52 chr17 8148817 8149023 -81355530 - AluSx SINE Alu -1 311 102 2321 89 0 7 chr17 8149023 8149327 -81355226 - AluY SINE Alu -9 302 1 1857 100 55 52 chr17 8149327 8149430 -81355123 - AluSx SINE Alu -210 102 1 237 178 0 0 chr17 8151012 8151057 -81353496 + (CGG)n Simple_repeat Simple_repeat 3 47 0 2012 123 18 0 chr17 8152517 8152802 -81351751 + AluSx SINE Alu 1 290 -22 609 14 0 0 chr17 8152803 8152873 -81351680 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 1781 110 88 0 chr17 8152877 8153175 -81351378 + AluSx SINE Alu 2 323 0 298 325 16 16 chr17 8153735 8153858 -81350695 + MIR SINE MIR 73 195 -67 2430 71 0 19 chr17 8153880 8154191 -81350362 - AluY SINE Alu -6 305 1 2039 78 13 49 chr17 8154191 8154498 -81350055 - AluY SINE Alu -15 296 1 971 155 25 6 chr17 8154782 8154943 -81349610 + AluJb SINE Alu 120 283 -29 1336 160 53 97 chr17 8154963 8155100 -81349453 + AluJo SINE Alu 3 144 -168 1983 129 0 7 chr17 8155100 8155394 -81349159 + AluSx SINE Alu 5 296 -16 1336 160 53 97 chr17 8155394 8155426 -81349127 + AluJo SINE Alu 144 176 -136 180 0 0 0 chr17 8155426 8155446 -81349107 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1336 160 53 97 chr17 8155446 8155594 -81348959 + AluJo SINE Alu 176 307 -5 224 208 21 0 chr17 8159170 8159218 -81345335 + G-rich Low_complexity Low_complexity 1 49 0 250 289 0 10 chr17 8159632 8159736 -81344817 + G-rich Low_complexity Low_complexity 3 105 0 290 287 22 39 chr17 8160556 8160737 -81343816 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 * 307 279 12 43 chr17 8160688 8160849 -81343704 + (CAGAGA)n Simple_repeat Simple_repeat 4 159 0 244 273 45 0 chr17 8161117 8161183 -81343370 + L2 LINE L2 3210 3278 -35 328 159 16 0 chr17 8163469 8163532 -81341021 - MER61-int LTR ERV1 -239 4978 4915 2006 99 64 3 chr17 8163532 8163814 -81340739 + AluSx SINE Alu 1 299 -13 1892 97 44 69 chr17 8163817 8164136 -81340417 + AluSq SINE Alu 3 313 0 6060 110 7 8 chr17 8164138 8165092 -81339461 - MER61-int LTR ERV1 -631 4586 3634 1973 114 61 7 chr17 8165100 8165397 -81339156 - AluSp SINE Alu 0 313 1 320 176 0 14 chr17 8165402 8165476 -81339077 + C-rich Low_complexity Low_complexity 1 73 0 1921 136 0 4 chr17 8165485 8165765 -81338788 - AluSx SINE Alu -33 279 1 5706 96 6 22 chr17 8165765 8166394 -81338159 - MER61-int LTR ERV1 -1586 3631 3018 2424 58 0 0 chr17 8166394 8166689 -81337864 - AluY SINE Alu -16 295 1 5706 96 6 22 chr17 8166689 8166966 -81337587 - MER61-int LTR ERV1 -2199 3018 2738 2899 55 3 31 chr17 8166966 8167081 -81337472 - L1PA8 LINE L1 -2 6170 6053 2066 101 7 7 chr17 8167081 8167096 -81337457 - AluSp SINE Alu -17 296 282 270 0 0 0 chr17 8167096 8167126 -81337427 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr17 8167125 8167147 -81337406 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 2066 101 7 7 chr17 8167126 8167427 -81337126 - AluSp SINE Alu -30 283 1 2899 55 3 31 chr17 8167427 8167692 -81336861 - L1PA8 LINE L1 -119 6053 5801 1949 134 7 0 chr17 8217837 8218121 -81286432 - AluSx SINE Alu -26 286 1 1626 160 93 0 chr17 8218153 8218422 -81286131 + AluJo SINE Alu 6 299 -13 2467 54 0 10 chr17 8218537 8218832 -81285721 - AluY SINE Alu -19 292 1 274 315 35 54 chr17 8219280 8219483 -81285070 + L2 LINE L2 2431 2629 -685 324 293 32 75 chr17 8219636 8219824 -81284729 - L2 LINE L2 -189 3083 2904 2664 52 0 0 chr17 8219868 8220175 -81284378 - AluY SINE Alu -4 307 1 372 298 113 36 chr17 8220261 8220509 -81284044 - L2 LINE L2 -785 2529 2263 344 272 28 51 chr17 8220590 8220616 -81283937 + L1ME3A LINE L1 5278 5303 -2505 2453 97 3 0 chr17 8220616 8220927 -81283626 + AluSx SINE Alu 1 312 0 344 272 28 51 chr17 8220927 8220955 -81283598 + L1ME3A LINE L1 5303 5330 -2478 2181 134 7 3 chr17 8220955 8221262 -81283291 + AluSx SINE Alu 1 308 -4 344 272 28 51 chr17 8221262 8221423 -81283130 + L1ME3A LINE L1 5330 5489 -2319 1307 180 9 0 chr17 8221448 8221659 -81282894 - AluJo SINE Alu -15 297 85 419 324 99 17 chr17 8221659 8221952 -81282601 + L1ME3A LINE L1 5517 5833 -337 1549 163 19 70 chr17 8222027 8222173 -81282380 + AluJo SINE Alu 1 153 -159 2173 93 4 7 chr17 8222173 8222451 -81282102 + AluSg1 SINE Alu 1 277 -32 306 0 0 0 chr17 8222453 8222487 -81282066 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1549 163 19 70 chr17 8222487 8222650 -81281903 + AluJo SINE Alu 154 297 -15 2014 132 4 4 chr17 8222715 8222996 -81281557 + AluSx SINE Alu 1 281 -31 2226 91 0 0 chr17 8223155 8223429 -81281124 - AluY SINE Alu -37 274 1 195 0 86 0 chr17 8223521 8223556 -81280997 + (TA)n Simple_repeat Simple_repeat 1 38 0 498 291 95 75 chr17 8223585 8223759 -81280794 + L1M4 LINE L1 4217 4386 -1760 2147 144 7 0 chr17 8223759 8224065 -81280488 + AluSx SINE Alu 1 308 -4 498 291 95 75 chr17 8224065 8224333 -81280220 + L1M4 LINE L1 4386 4668 -1478 2159 100 4 4 chr17 8224375 8224654 -81279899 + AluSc SINE Alu 1 279 -30 1836 108 8 4 chr17 8224667 8224926 -81279627 + AluSx SINE Alu 44 303 -9 2042 142 0 3 chr17 8224933 8225228 -81279325 + AluSx SINE Alu 1 294 -18 323 208 39 39 chr17 8225796 8225873 -81278680 - MIR SINE MIR -64 198 122 286 286 0 0 chr17 8225893 8225956 -81278597 + L2 LINE L2 1183 1245 -2069 2205 86 41 14 chr17 8226174 8226466 -81278087 + AluSg SINE Alu 1 300 -10 1050 104 7 0 chr17 8226476 8226611 -81277942 + AluSq/x SINE Alu 1 136 -176 2353 74 7 10 chr17 8226611 8226908 -81277645 + AluSg SINE Alu 1 296 -14 1479 137 10 0 chr17 8227123 8227328 -81277225 - AluSx SINE Alu -105 207 1 981 42 21 0 chr17 8227332 8227475 -81277078 + (TCTA)n Simple_repeat Simple_repeat 1 146 0 397 200 60 0 chr17 8227475 8227575 -81276978 - FLAM_C SINE Alu -17 116 11 1817 158 3 7 chr17 8227586 8227871 -81276682 - AluSx SINE Alu -28 284 1 1427 239 106 20 chr17 8227871 8228373 -81276180 + HAL1 LINE L1 1600 2144 -363 477 139 0 13 chr17 8228375 8228454 -81276099 + AluS SINE Alu 2 79 -233 2231 110 13 7 chr17 8228756 8229064 -81275489 - AluSq SINE Alu 0 313 4 23 54 0 0 chr17 8229129 8229166 -81275387 + AT_rich Low_complexity Low_complexity 1 37 0 2036 151 0 3 chr17 8229167 8229478 -81275075 - AluSx SINE Alu -2 310 1 571 133 133 26 chr17 8229478 8229591 -81274962 - AluJo SINE Alu -177 135 11 404 217 8 47 chr17 8229904 8230033 -81274520 + AluSq/x SINE Alu 1 124 -189 2188 86 4 0 chr17 8230246 8230533 -81274020 + AluSp SINE Alu 17 304 0 311 294 13 77 chr17 8230967 8231202 -81273351 - AluJb SINE Alu -11 291 108 480 179 0 0 chr17 8231535 8231619 -81272934 + AluJ/FRAM SINE Alu 216 299 -13 1200 193 10 0 chr17 8231734 8231941 -81272612 - AluJo SINE Alu -19 293 85 212 286 236 11 chr17 8233373 8233555 -81270998 + L2 LINE L2 2492 2714 -600 1285 117 0 48 chr17 8233560 8233748 -81270805 + AluSc SINE Alu 1 179 -130 2242 98 0 7 chr17 8234087 8234374 -81270179 + AluY SINE Alu 1 285 -26 616 229 150 9 chr17 8234383 8234598 -81269955 - L1MB2 LINE L1 -21 6150 5900 1945 170 0 0 chr17 8234598 8234904 -81269649 - AluJb SINE Alu -6 306 1 616 229 150 9 chr17 8234904 8234915 -81269638 - L1MB2 LINE L1 -271 5900 5892 866 157 0 0 chr17 8235109 8235230 -81269323 - FLAM_C SINE Alu -22 121 1 663 253 54 5 chr17 8235421 8235607 -81268946 + MIR SINE MIR 67 261 -1 2144 126 7 0 chr17 8235865 8236158 -81268395 - AluSx SINE Alu -17 295 1 211 281 62 42 chr17 8236648 8236744 -81267809 - MIR SINE MIR -6 256 159 694 281 210 12 chr17 8236964 8237545 -81267008 + L2 LINE L2 1889 2584 -730 214 210 0 32 chr17 8238748 8238810 -81265743 + C-rich Low_complexity Low_complexity 6 65 0 1990 163 0 0 chr17 8239027 8239333 -81265220 - AluJb SINE Alu -6 306 1 578 303 101 0 chr17 8239365 8239583 -81264970 - MIR SINE MIR -20 242 3 211 341 0 31 chr17 8239876 8240005 -81264548 + C-rich Low_complexity Low_complexity 4 128 0 2074 99 59 6 chr17 8240564 8240819 -81263734 + MER2 DNA MER2_type 6 283 -62 2329 74 0 42 chr17 8240819 8241131 -81263422 - AluSx SINE Alu -11 301 3 2074 99 59 6 chr17 8241131 8241198 -81263355 + MER2 DNA MER2_type 283 345 0 1687 203 38 3 chr17 8241204 8241549 -81263004 - MER21B LTR ERV1 -60 803 447 464 77 15 0 chr17 8241550 8241615 -81262938 + AluS SINE Alu 2 67 -246 2279 105 0 38 chr17 8242017 8242331 -81262222 + AluSx SINE Alu 1 302 -10 518 160 0 75 chr17 8244121 8244227 -81260326 + FLAM_A SINE Alu 1 98 -44 1972 93 0 25 chr17 8244395 8244675 -81259878 - AluSx SINE Alu -39 273 1 22 0 0 0 chr17 8244675 8244697 -81259856 + AT_rich Low_complexity Low_complexity 1 22 0 826 187 0 13 chr17 8244989 8245162 -81259391 - AluSg/x SINE Alu 0 304 134 2258 104 0 3 chr17 8245488 8245795 -81258758 - AluSx SINE Alu -6 306 1 489 265 54 7 chr17 8245933 8246080 -81258473 + MIR SINE MIR 20 173 -89 1973 119 25 0 chr17 8246366 8246652 -81257901 + AluSx SINE Alu 6 298 -14 1079 145 36 54 chr17 8247533 8247754 -81256799 - AluJo SINE Alu -5 307 91 1955 106 65 14 chr17 8247767 8248060 -81256493 - AluSx SINE Alu -4 308 1 454 243 111 0 chr17 8248292 8248436 -81256117 + MIR SINE MIR 53 212 -50 321 294 45 51 chr17 8248519 8248603 -81255950 - L2 LINE L2 -177 3095 3012 2361 75 3 0 chr17 8248603 8248909 -81255644 - AluY SINE Alu -4 307 1 321 294 45 51 chr17 8248909 8249001 -81255552 - L2 LINE L2 -260 3012 2920 452 286 6 56 chr17 8249075 8249236 -81255317 - MIR SINE MIR -62 200 48 2158 85 0 42 chr17 8249255 8249426 -81255127 - AluSg SINE Alu -16 294 117 180 0 0 0 chr17 8249426 8249446 -81255107 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2108 69 44 0 chr17 8249447 8249721 -81254832 - AluY SINE Alu -25 286 1 2158 85 0 42 chr17 8249721 8249854 -81254699 - AluSg SINE Alu -192 118 1 1917 161 0 3 chr17 8250727 8251037 -81253516 - AluSx SINE Alu -3 309 1 189 0 0 0 chr17 8251058 8251079 -81253474 + (T)n Simple_repeat Simple_repeat 1 21 0 1058 106 0 4 chr17 8251116 8251333 -81253220 - AluJb SINE Alu -10 302 2 2138 104 10 0 chr17 8251894 8252193 -81252360 + AluSx SINE Alu 1 302 -10 2072 83 0 0 chr17 8252449 8252715 -81251838 - AluSx SINE Alu -46 266 1 367 298 48 36 chr17 8252715 8252883 -81251670 - L1MC4a LINE L1 -1916 5892 5723 23 0 0 0 chr17 8252929 8252952 -81251601 + AT_rich Low_complexity Low_complexity 1 23 0 359 290 142 12 chr17 8252961 8253130 -81251423 - MIR3 SINE MIR -4 204 14 546 179 111 0 chr17 8253673 8253790 -81250763 - FLAM_C SINE Alu -9 134 5 277 121 0 35 chr17 8253799 8253857 -81250696 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 2070 134 0 3 chr17 8253857 8254170 -81250383 - AluJb SINE Alu 0 312 1 2090 109 0 0 chr17 8254182 8254494 -81250059 - AluSx SINE Alu 0 312 1 255 267 67 0 chr17 8254534 8254609 -81249944 + MER5B DNA MER1_type 61 140 -38 1742 211 58 3 chr17 8255283 8255629 -81248924 - MLT1A1 LTR MaLR 0 365 1 887 211 30 20 chr17 8257334 8257370 -81247183 + MER3 DNA MER1_type 9 43 -166 418 101 159 0 chr17 8257370 8257439 -81247114 - MADE1 DNA Mariner 0 80 1 887 211 30 20 chr17 8257439 8257601 -81246952 + MER3 DNA MER1_type 43 209 0 2350 141 19 8 chr17 8257667 8258028 -81246525 + MLT1A1 LTR MaLR 1 365 0 1846 134 35 0 chr17 8258723 8259006 -81245547 + AluSx SINE Alu 1 293 -19 328 160 140 0 chr17 8259018 8259118 -81245435 + Charlie5 DNA MER1_type 2423 2536 -76 1466 136 17 4 chr17 8259121 8259356 -81245197 + AluJb SINE Alu 1 238 -74 2099 107 3 0 chr17 8259456 8259746 -81244807 + AluSx SINE Alu 3 293 -19 876 152 0 0 chr17 8259758 8259890 -81244663 + FLAM_C SINE Alu 1 132 -1 225 179 0 104 chr17 8259913 8259980 -81244573 + Charlie8 DNA MER1_type 160 219 -2198 382 333 24 44 chr17 8260013 8260265 -81244288 - L2 LINE L2 -557 2757 2511 2335 81 0 0 chr17 8260629 8260926 -81243627 + AluSx SINE Alu 1 297 -15 181 360 140 18 chr17 8261488 8261602 -81242951 - L2 LINE L2 -5 3308 3181 1927 140 3 10 chr17 8261635 8261935 -81242618 + AluJb SINE Alu 1 298 -14 27 49 0 0 chr17 8262030 8262071 -81242482 + AT_rich Low_complexity Low_complexity 1 41 0 267 136 0 0 chr17 8262116 8262160 -81242393 + Tigger5 DNA MER2_type 15 58 -2265 * 1637 103 0 4 chr17 8262156 8262398 -81242155 + Tigger5 DNA MER2_type 2052 2292 -31 2452 62 0 7 chr17 8262441 8262750 -81241803 + AluY SINE Alu 1 307 -4 1776 115 4 4 chr17 8263649 8263909 -81240644 - AluSq SINE Alu -53 260 1 1792 146 28 0 chr17 8264266 8264553 -81240000 - AluJb SINE Alu -17 295 1 1503 177 89 0 chr17 8264736 8264903 -81239650 - AluJb SINE Alu -5 307 156 189 0 0 0 chr17 8264903 8264924 -81239629 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1503 177 89 0 chr17 8264924 8265038 -81239515 - AluJb SINE Alu -156 156 1 2202 85 13 3 chr17 8265097 8265402 -81239151 - AluSq SINE Alu -5 308 1 341 318 88 0 chr17 8265414 8265653 -81238900 - L1ME3A LINE L1 -295 5875 5677 1048 26 45 7 chr17 8267465 8267619 -81236934 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 808 155 14 7 chr17 8267653 8267795 -81236758 - AluJo SINE Alu -169 143 1 454 220 10 10 chr17 8268677 8268777 -81235776 + MER96B DNA MER1_type? 1 100 -317 1811 135 0 0 chr17 8268780 8269047 -81235506 - AluSx SINE Alu -6 306 40 852 189 22 22 chr17 8269200 8269422 -81235131 - MER96B DNA MER1_type? -97 320 99 1635 154 0 4 chr17 8269422 8269681 -81234872 + AluJb SINE Alu 1 258 -54 313 70 35 0 chr17 8269682 8269739 -81234814 + (TA)n Simple_repeat Simple_repeat 2 60 0 1550 107 9 5 chr17 8269746 8269970 -81234583 + AluSp SINE Alu 1 225 -88 678 189 0 0 chr17 8270071 8270182 -81234371 - FLAM_C SINE Alu -32 111 1 198 0 0 0 chr17 8270203 8270225 -81234328 + (T)n Simple_repeat Simple_repeat 1 22 0 1090 101 0 4 chr17 8270261 8270478 -81234075 - AluJb SINE Alu -10 302 2 2360 87 0 3 chr17 8271187 8271497 -81233056 - AluSc SINE Alu 0 309 1 3607 172 33 57 chr17 8272020 8272061 -81232492 - L1MB5 LINE L1 0 6174 6134 2179 113 0 7 chr17 8272061 8272370 -81232183 - AluSx SINE Alu -5 307 1 3607 172 33 57 chr17 8272370 8273149 -81231404 - L1MB5 LINE L1 -40 6134 5374 3482 147 35 20 chr17 8273845 8274442 -81230111 - L1MA8 LINE L1 -6 6285 5680 2001 133 0 13 chr17 8274574 8274882 -81229671 - AluSx SINE Alu -8 304 1 469 317 70 10 chr17 8274889 8275088 -81229465 - L1MB5 LINE L1 -964 5182 4972 23 33 0 0 chr17 8275119 8275149 -81229404 + AT_rich Low_complexity Low_complexity 1 30 0 477 223 18 0 chr17 8275288 8275400 -81229153 + MIR SINE MIR 100 213 -49 805 247 60 40 chr17 8277026 8277286 -81227267 + MIR SINE MIR 2 261 -1 240 263 47 23 chr17 8277549 8277720 -81226833 + (CAGAGA)n Simple_repeat Simple_repeat 1 175 0 468 77 0 0 chr17 8282895 8282960 -81221593 + (CCA)n Simple_repeat Simple_repeat 2 66 0 219 69 0 0 chr17 8283450 8283479 -81221074 + (CAG)n Simple_repeat Simple_repeat 1 29 0 201 39 0 0 chr17 8285659 8285685 -81218868 + (CCCCG)n Simple_repeat Simple_repeat 3 28 0 234 241 0 60 chr17 8286098 8286181 -81218372 + C-rich Low_complexity Low_complexity 3 80 0 2169 97 3 7 chr17 8287791 8288090 -81216463 - AluSq SINE Alu -15 298 1 189 360 58 12 chr17 8288352 8288438 -81216115 - MIR SINE MIR -152 110 21 668 267 108 0 chr17 8290073 8290249 -81214304 + MER91A DNA MER1_type 2 196 0 1326 82 0 0 chr17 8290266 8290437 -81214116 - AluSq SINE Alu -7 306 136 2137 82 41 0 chr17 8290778 8291071 -81213482 + AluSg SINE Alu 1 305 -5 323 251 261 16 chr17 8291264 8291346 -81213207 + L1ME LINE L1 4390 4451 -1695 961 245 58 37 chr17 8291346 8291640 -81212913 + AluJo SINE Alu 1 300 -2 323 251 261 16 chr17 8291640 8291860 -81212693 + L1ME LINE L1 4451 4766 -1380 1281 189 66 4 chr17 8291876 8292135 -81212418 + AluJb SINE Alu 6 280 -32 216 0 0 0 chr17 8292136 8292160 -81212393 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1044 244 88 31 chr17 8292167 8292344 -81212209 + L1ME LINE L1 4773 4939 -1207 2158 123 0 0 chr17 8292344 8292654 -81211899 + AluSx SINE Alu 1 310 -2 1044 244 88 31 chr17 8292654 8292956 -81211597 + L1ME LINE L1 4939 5279 -867 232 267 19 29 chr17 8292946 8293051 -81211502 + L1ME LINE L1 5818 5921 -249 * 2327 82 3 3 chr17 8293250 8293556 -81210997 + AluSx SINE Alu 1 306 -6 1515 104 0 58 chr17 8293761 8294002 -81210551 + AluSx SINE Alu 1 227 -85 509 160 0 0 chr17 8294077 8294152 -81210401 - AluS SINE Alu -236 76 2 246 235 20 0 chr17 8294188 8294239 -81210314 - MLT1B LTR MaLR -295 95 44 656 198 28 55 chr17 8295019 8295201 -81209352 + MIR SINE MIR 86 262 0 269 118 20 0 chr17 8296708 8296759 -81207794 + CT-rich Low_complexity Low_complexity 1 52 0 2168 111 3 0 chr17 8296779 8297077 -81207476 - AluSq SINE Alu -14 299 1 847 242 102 79 chr17 8297301 8297772 -81206781 - L2 LINE L2 0 3313 2832 1889 107 0 18 chr17 8297819 8298099 -81206454 + AluJb SINE Alu 1 275 -37 748 259 151 45 chr17 8298120 8298498 -81206055 - L2 LINE L2 -1963 1351 934 2046 132 3 0 chr17 8299029 8299332 -81205221 - AluSq SINE Alu -9 304 1 279 263 50 12 chr17 8299371 8299451 -81205102 - L2 LINE L2 -15 3257 3175 198 327 156 34 chr17 8299777 8299982 -81204571 - L2 LINE L2 -639 2675 2446 839 170 0 0 chr17 8299982 8300123 -81204430 + FLAM_C SINE Alu 2 142 -1 189 390 84 0 chr17 8300123 8300277 -81204276 - L2 LINE L2 -851 2463 2297 412 198 31 0 chr17 8300281 8300377 -81204176 + MER5A DNA MER1_type 4 102 -87 290 278 93 0 chr17 8300450 8300558 -81203995 - L2 LINE L2 -1021 2293 2176 497 231 134 43 chr17 8303533 8303719 -81200834 + MIR SINE MIR 3 205 -57 818 135 8 15 chr17 8303990 8304123 -81200430 + AluJb SINE Alu 1 132 -180 497 308 0 15 chr17 8304319 8304589 -81199964 + (TG)n Simple_repeat Simple_repeat 1 265 0 665 97 11 0 chr17 8304976 8305069 -81199484 + AluSg SINE Alu 2 95 -215 231 324 15 93 chr17 8305108 8305220 -81199333 - HAL1 LINE L1 -13 2494 2404 1852 104 90 0 chr17 8305220 8305498 -81199055 - AluSp SINE Alu -10 303 1 231 324 15 93 chr17 8305498 8305589 -81198964 - HAL1 LINE L1 -103 2404 2307 487 305 107 47 chr17 8305613 8305846 -81198707 - L1MC5 LINE L1 -55 7906 7660 2251 97 0 0 chr17 8306165 8306464 -81198089 - AluSx SINE Alu -13 299 1 533 261 31 0 chr17 8306537 8306698 -81197855 - L1MC4a LINE L1 -1959 5849 5684 762 118 26 92 chr17 8306700 8306852 -81197701 + FLAM_C SINE Alu 2 143 0 1844 107 0 92 chr17 8307125 8307451 -81197102 - AluSq SINE Alu -17 296 1 881 191 0 0 chr17 8307451 8307603 -81196950 - FRAM SINE Alu -9 167 16 2310 88 3 7 chr17 8308022 8308330 -81196223 - AluSx SINE Alu -5 307 1 214 171 0 0 chr17 8308774 8308809 -81195744 + (CA)n Simple_repeat Simple_repeat 1 35 0 2133 124 0 3 chr17 8309453 8309760 -81194793 - AluSx SINE Alu -6 306 1 352 196 196 0 chr17 8311256 8311353 -81193200 + MIR SINE MIR 17 132 -130 413 309 32 16 chr17 8311394 8311517 -81193036 - L2 LINE L2 -6 3266 3142 305 192 88 16 chr17 8311762 8311810 -81192743 - L1MEd LINE L1 -3175 2954 2911 2292 68 0 29 chr17 8311810 8312118 -81192435 + AluSx SINE Alu 1 299 -13 305 192 88 16 chr17 8312118 8312194 -81192359 - L1MEd LINE L1 -3218 2911 2821 801 280 21 7 chr17 8312218 8312500 -81192053 - L1M4 LINE L1 -3531 2615 2330 884 226 55 115 chr17 8312501 8312649 -81191904 - L1MEd LINE L1 -3343 2786 2631 847 222 0 18 chr17 8312649 8312816 -81191737 - FRAM SINE Alu -2 164 1 884 226 55 115 chr17 8312816 8313291 -81191262 - L1MEd LINE L1 -3498 2631 2201 263 175 0 38 chr17 8313306 8313386 -81191167 - HAL1 LINE L1 -413 2094 2018 1362 186 91 11 chr17 8313387 8313672 -81190881 - AluJb SINE Alu -4 308 1 243 0 0 0 chr17 8313685 8313712 -81190841 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 752 275 82 42 chr17 8313721 8313836 -81190717 - HAL1 LINE L1 -481 2026 1917 2314 67 3 0 chr17 8313836 8314145 -81190408 + AluSp SINE Alu 1 310 0 752 275 82 42 chr17 8314145 8314359 -81190194 - HAL1 LINE L1 -590 1917 1683 832 183 35 6 chr17 8314359 8314528 -81190025 - AluJo SINE Alu -138 174 1 1445 279 79 47 chr17 8314534 8315309 -81189244 - L1MEd LINE L1 -5318 801 2 265 331 17 58 chr17 8315391 8315563 -81188990 - L2 LINE L2 -2299 1015 851 375 267 69 0 chr17 8315574 8315675 -81188878 - MIR SINE MIR -68 140 33 1981 142 0 10 chr17 8315710 8316020 -81188533 - AluJb SINE Alu -5 307 1 1875 103 0 0 chr17 8318344 8318597 -81185956 + AluSx SINE Alu 1 253 -59 198 0 0 0 chr17 8318599 8318621 -81185932 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 231 297 16 0 chr17 8319294 8319358 -81185195 + MER117 DNA MER1_type 5 69 -128 765 103 0 0 chr17 8320054 8320161 -81184392 - AluJo SINE Alu -1 311 205 961 95 0 47 chr17 8320168 8320316 -81184237 - AluJo SINE Alu -171 141 1 2143 128 0 0 chr17 8320722 8321028 -81183525 - AluSx SINE Alu -6 306 1 2375 83 3 6 chr17 8321493 8321807 -81182746 - AluSp SINE Alu 0 313 1 4229 137 51 48 chr17 8322712 8323181 -81181372 + MER44D DNA MER2_type 1 346 -2141 2297 104 0 0 chr17 8323181 8323488 -81181065 + AluSx SINE Alu 1 307 -5 4229 137 51 48 chr17 8323488 8323749 -81180804 + MER44D DNA MER2_type 346 605 0 185 377 132 9 chr17 8323992 8324106 -81180447 + MIR SINE MIR 16 143 -65 2019 112 3 3 chr17 8324137 8324458 -81180095 + AluSp SINE Alu 1 321 0 22 0 0 0 chr17 8324891 8324913 -81179640 + AT_rich Low_complexity Low_complexity 1 22 0 1902 134 10 0 chr17 8325195 8325485 -81179068 + AluSq SINE Alu 1 293 -20 22 0 0 0 chr17 8325485 8325507 -81179046 + AT_rich Low_complexity Low_complexity 1 22 0 201 175 0 0 chr17 8327020 8327060 -81177493 + (CAG)n Simple_repeat Simple_repeat 1 40 0 306 50 0 0 chr17 8327620 8327660 -81176893 + (CCA)n Simple_repeat Simple_repeat 2 41 0 226 253 0 36 chr17 8327678 8327761 -81176792 + C-rich Low_complexity Low_complexity 2 81 0 21 0 0 0 chr17 8332465 8332486 -81172067 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 8332743 8332778 -81171775 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr17 8333487 8333518 -81171035 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 8333843 8333864 -81170689 + AT_rich Low_complexity Low_complexity 1 21 0 1429 140 23 45 chr17 8339226 8339491 -81165062 - AluJo SINE Alu -16 296 38 370 338 60 13 chr17 8339504 8339655 -81164898 - MIR SINE MIR -84 178 21 483 315 217 24 chr17 8340694 8341357 -81163196 + L2 LINE L2 2467 3267 -5 2194 101 0 13 chr17 8341536 8341852 -81162701 + AluSq SINE Alu 1 312 -1 1226 167 107 4 chr17 8343445 8343678 -81160875 - AluJo SINE Alu -55 257 1 463 142 206 77 chr17 8343678 8343703 -81160850 - Tigger4(Zombi) DNA MER2_type -186 2545 2525 1966 121 31 0 chr17 8343703 8343993 -81160560 + AluSx SINE Alu 1 299 -13 463 142 206 77 chr17 8343993 8344122 -81160431 - Tigger4(Zombi) DNA MER2_type -206 2525 1 470 237 42 9 chr17 8344266 8344399 -81160154 - MIR SINE MIR -62 200 65 387 197 0 0 chr17 8344479 8344540 -81160013 - MLT1G1 LTR MaLR -70 525 465 608 203 153 10 chr17 8344558 8344833 -81159720 - MLT1G1 LTR MaLR -194 348 3 406 237 119 17 chr17 8344978 8345096 -81159457 - L2 LINE L2 0 3272 3143 2347 43 0 68 chr17 8345165 8345488 -81159065 - AluY SINE Alu -10 301 1 2100 89 31 0 chr17 8345858 8346150 -81158403 - AluSg SINE Alu -7 303 3 314 296 113 0 chr17 8346334 8346449 -81158104 - L2 LINE L2 -7 3306 3179 194 250 100 0 chr17 8346647 8346707 -81157846 - MIR SINE MIR -187 75 10 779 331 218 22 chr17 8346741 8348093 -81156460 - L2 LINE L2 -1230 2084 469 2339 85 3 3 chr17 8348095 8348402 -81156151 + AluSq SINE Alu 1 307 -6 1712 160 3 3 chr17 8348405 8348712 -81155841 + AluJo SINE Alu 1 307 0 1627 151 11 14 chr17 8348835 8349120 -81155433 - AluJo SINE Alu -19 293 10 3201 135 56 4 chr17 8349146 8349702 -81154851 - L1MB7 LINE L1 -19 6165 5581 327 219 143 19 chr17 8350339 8350444 -81154109 - L1MC4a LINE L1 -1818 5990 5873 346 273 74 69 chr17 8350734 8350950 -81153603 - L1MC4a LINE L1 -1780 6028 5812 341 106 0 0 chr17 8350966 8351013 -81153540 - MER4E LTR ERV1 -69 710 664 510 313 30 20 chr17 8351038 8351239 -81153314 - L1MC4a LINE L1 -2032 5776 5574 370 344 46 7 chr17 8351366 8351517 -81153036 + MIR3 SINE MIR 16 172 -36 572 178 20 27 chr17 8351649 8351795 -81152758 - MER113 DNA MER1_type? -365 156 12 1873 93 0 15 chr17 8351957 8352226 -81152327 + AluSq SINE Alu 26 290 -23 24 53 0 0 chr17 8352227 8352265 -81152288 + AT_rich Low_complexity Low_complexity 1 38 0 351 178 48 27 chr17 8352408 8352554 -81151999 + (TA)n Simple_repeat Simple_repeat 2 150 0 32 0 0 0 chr17 8353173 8353205 -81151348 + AT_rich Low_complexity Low_complexity 1 32 0 253 186 29 29 chr17 8353493 8353563 -81150990 + GA-rich Low_complexity Low_complexity 2 71 0 245 307 18 18 chr17 8353693 8353885 -81150668 + GA-rich Low_complexity Low_complexity 1 192 0 348 309 24 18 chr17 8355316 8355481 -81149072 + (CAGG)n Simple_repeat Simple_repeat 2 167 0 244 306 8 32 chr17 8355457 8355581 -81148972 + GA-rich Low_complexity Low_complexity 6 126 0 * 234 0 0 0 chr17 8357564 8357590 -81146963 + (CA)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 8357941 8357988 -81146565 + (TA)n Simple_repeat Simple_repeat 1 47 0 360 0 0 0 chr17 8358190 8358230 -81146323 + (GGA)n Simple_repeat Simple_repeat 2 41 0 609 79 0 0 chr17 8358231 8358307 -81146246 + AluSp/q SINE Alu 155 230 -83 436 326 91 50 chr17 8358410 8358848 -81145705 + L2 LINE L2 1103 1558 -1756 530 297 110 78 chr17 8359526 8359870 -81144683 + L2 LINE L2 1598 1929 -1385 2192 103 0 0 chr17 8359870 8360172 -81144381 - AluSx SINE Alu -9 303 2 530 297 110 78 chr17 8360172 8360698 -81143855 + L2 LINE L2 1929 2496 -818 801 212 29 0 chr17 8360809 8360979 -81143574 - Charlie8 DNA MER1_type -2168 249 75 2507 40 0 0 chr17 8361114 8361410 -81143143 - AluY SINE Alu -15 296 1 318 280 89 78 chr17 8361442 8361643 -81142910 + L1M4 LINE L1 4214 4420 -1726 315 0 0 0 chr17 8361643 8361678 -81142875 + (TG)n Simple_repeat Simple_repeat 2 36 0 318 280 89 78 chr17 8361678 8361733 -81142820 + L1M4 LINE L1 4420 4473 -1673 806 203 7 13 chr17 8361733 8361886 -81142667 + AluJb SINE Alu 134 285 -27 267 31 0 0 chr17 8361886 8361918 -81142635 + (CA)n Simple_repeat Simple_repeat 2 33 0 759 293 150 49 chr17 8361926 8362414 -81142139 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 8362414 8362443 -81142110 + AT_rich Low_complexity Low_complexity 1 29 0 581 156 0 2 chr17 8362446 8362722 -81141831 + AluSx SINE Alu 1 327 0 265 221 15 0 chr17 8363159 8363227 -81141326 + HAL1 LINE L1 840 908 -1599 926 204 171 24 chr17 8363241 8363575 -81140978 + HAL1 LINE L1 1581 1963 -544 528 120 13 0 chr17 8363656 8363731 -81140822 + AluS SINE Alu 2 77 -236 254 131 475 0 chr17 8363731 8363822 -81140731 + AluSg/x SINE Alu 192 311 0 2182 88 0 7 chr17 8363829 8364124 -81140429 - AluSg SINE Alu -17 293 1 425 290 49 11 chr17 8364125 8364308 -81140245 + HAL1 LINE L1 2029 2218 -289 2378 83 3 0 chr17 8364500 8364812 -81139741 - AluSp SINE Alu 0 313 1 1758 158 3 3 chr17 8365043 8365346 -81139207 + AluJb SINE Alu 1 303 -9 383 242 25 50 chr17 8366408 8366569 -81137984 + L1MC4a LINE L1 5734 5890 -1918 694 112 103 26 chr17 8366574 8366690 -81137863 + FLAM_C SINE Alu 5 129 -4 2396 79 0 0 chr17 8366825 8367129 -81137424 - AluSq SINE Alu -4 309 6 335 272 97 61 chr17 8367827 8367941 -81136612 - MIR SINE MIR -122 140 23 1722 125 96 0 chr17 8368019 8368299 -81136254 - AluJo SINE Alu 0 312 6 1112 80 12 19 chr17 8368313 8368475 -81136078 - L1PA13 LINE L1 0 6163 6003 2240 99 0 0 chr17 8368544 8368846 -81135707 + AluSx SINE Alu 1 302 -10 1732 77 0 0 chr17 8369520 8369741 -81134812 - AluSg/x SINE Alu -5 305 85 345 221 77 10 chr17 8369858 8369962 -81134591 + L2 LINE L2 3199 3309 -4 1965 124 7 0 chr17 8370157 8370455 -81134098 - AluJb SINE Alu -12 300 1 2029 132 0 3 chr17 8371388 8371691 -81132862 - AluSx SINE Alu -10 302 1 2292 85 7 0 chr17 8371876 8372182 -81132371 + AluSp SINE Alu 1 308 -5 2314 70 0 3 chr17 8372182 8372633 -81131920 + AluY SINE Alu 1 451 0 798 292 29 0 chr17 8373511 8373720 -81130833 - MIR SINE MIR -20 242 28 2363 79 0 0 chr17 8374411 8374715 -81129838 - AluSx SINE Alu -8 304 1 2273 76 0 19 chr17 8375210 8375527 -81129026 + AluY SINE Alu 1 311 0 2216 109 0 0 chr17 8376836 8377139 -81127414 - AluSq SINE Alu -10 303 1 785 125 117 0 chr17 8377666 8377786 -81126767 + AluJo SINE Alu 3 136 -176 2298 86 0 0 chr17 8377786 8378090 -81126463 + AluSx SINE Alu 1 304 -8 1867 139 36 3 chr17 8378100 8378402 -81126151 + AluJb SINE Alu 1 312 0 2209 94 3 22 chr17 8378409 8378727 -81125826 + AluSx SINE Alu 1 312 0 2330 90 0 3 chr17 8380062 8380372 -81124181 + AluSg SINE Alu 1 309 -1 448 245 59 0 chr17 8380953 8381055 -81123498 + L2 LINE L2 3164 3271 -1 2278 105 0 0 chr17 8381380 8381686 -81122867 - AluSx SINE Alu -6 306 1 2379 83 0 0 chr17 8381792 8382092 -81122461 - AluSp SINE Alu -13 300 1 1186 213 102 18 chr17 8382126 8382567 -81121986 - HAL1b LINE L1 0 1348 871 324 206 140 37 chr17 8382571 8382664 -81121889 - L1MC4 LINE L1 -368 7674 7567 2121 113 0 10 chr17 8382664 8382677 -81121876 - AluSx SINE Alu -5 307 295 257 0 30 0 chr17 8382677 8382710 -81121843 + (TTTAA)n Simple_repeat Simple_repeat 2 35 0 2121 113 0 10 chr17 8382710 8383006 -81121547 - AluSx SINE Alu -17 295 1 324 206 140 37 chr17 8383006 8383019 -81121534 - L1MC4 LINE L1 -475 7567 7557 795 95 0 0 chr17 8383026 8383131 -81121422 - AluSg/x SINE Alu -18 291 187 448 256 7 29 chr17 8383131 8383268 -81121285 - L1MC4 LINE L1 -465 7577 7444 309 251 161 35 chr17 8383314 8383513 -81121040 - HAL1b LINE L1 -1055 293 70 2169 85 3 0 chr17 8384109 8384412 -81120141 + AluSp SINE Alu 1 304 0 719 177 0 8 chr17 8384432 8384562 -81119991 - FLAM_A SINE Alu -1 141 13 2077 124 0 0 chr17 8384825 8385124 -81119429 - AluJb SINE Alu -1 311 13 25 51 0 0 chr17 8385259 8385298 -81119255 + AT_rich Low_complexity Low_complexity 1 39 0 345 209 77 11 chr17 8385400 8385491 -81119062 - U6 snRNA snRNA -9 98 2 380 320 134 48 chr17 8385532 8386057 -81118496 + L2 LINE L2 2524 3182 -90 2330 81 0 13 chr17 8386057 8386367 -81118186 - AluSc SINE Alu -3 306 1 380 320 134 48 chr17 8386367 8386443 -81118110 + L2 LINE L2 3182 3250 -22 225 0 0 0 chr17 8386911 8386936 -81117617 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2195 98 3 0 chr17 8387236 8387531 -81117022 + AluSx SINE Alu 1 296 -16 2072 109 0 0 chr17 8387533 8387844 -81116709 + AluSx SINE Alu 1 311 0 314 239 26 71 chr17 8387971 8388084 -81116469 + L1MB5 LINE L1 5261 5368 -778 2020 97 0 58 chr17 8388090 8388398 -81116155 + AluSg SINE Alu 1 290 -20 2121 117 0 0 chr17 8388449 8388757 -81115796 + AluSx SINE Alu 1 308 -4 1976 140 0 3 chr17 8388796 8389096 -81115457 + AluSx SINE Alu 1 299 -13 2072 101 9 25 chr17 8389182 8389500 -81115053 - AluSq SINE Alu 0 313 1 2186 106 3 0 chr17 8390267 8390570 -81113983 + AluSx SINE Alu 1 304 -8 2370 77 0 6 chr17 8390570 8390882 -81113671 + AluY SINE Alu 1 311 0 1707 210 75 5 chr17 8390901 8391301 -81113252 + L1MB5 LINE L1 5593 6020 -154 756 169 7 0 chr17 8391376 8391512 -81113041 + L1MB7 LINE L1 6029 6165 -19 2022 110 3 23 chr17 8391534 8391844 -81112709 + AluSx SINE Alu 1 304 -8 2286 87 0 0 chr17 8392365 8392663 -81111890 + AluSx SINE Alu 1 298 -14 1144 141 0 0 chr17 8392665 8392842 -81111711 + AluSg/x SINE Alu 136 312 0 2257 102 0 3 chr17 8394410 8394713 -81109840 + AluSx SINE Alu 1 302 -10 222 347 7 20 chr17 8395850 8395997 -81108556 + C-rich Low_complexity Low_complexity 2 146 0 24 0 0 0 chr17 8396604 8396628 -81107925 + GC_rich Low_complexity Low_complexity 1 24 0 1762 89 155 4 chr17 8399348 8399619 -81104934 + AluSx SINE Alu 1 312 0 372 43 0 0 chr17 8399672 8399718 -81104835 + (CA)n Simple_repeat Simple_repeat 2 47 0 691 299 115 20 chr17 8400150 8400334 -81104219 + L2 LINE L2 2884 3049 -264 2021 94 0 14 chr17 8400334 8400657 -81103896 + AluSx SINE Alu 1 319 0 691 299 115 20 chr17 8400657 8400863 -81103690 + L2 LINE L2 3049 3312 -1 21 0 0 0 chr17 8402479 8402500 -81102053 + AT_rich Low_complexity Low_complexity 1 21 0 385 225 45 36 chr17 8407090 8407201 -81097352 - MIR SINE MIR -131 131 20 22 56 0 0 chr17 8408785 8408821 -81095732 + GC_rich Low_complexity Low_complexity 1 36 0 486 288 0 34 chr17 8409083 8409264 -81095289 - MIR3 SINE MIR -55 153 14 190 269 30 0 chr17 8411852 8411919 -81092634 + MIR SINE MIR 76 144 -118 1133 60 0 0 chr17 8412434 8412568 -81091985 + AluSx SINE Alu 1 134 -179 1969 129 14 0 chr17 8412570 8412864 -81091689 + AluSx SINE Alu 1 298 -14 1038 98 0 75 chr17 8413302 8413476 -81091077 - AluSx SINE Alu -151 161 1 1122 154 0 0 chr17 8413613 8413801 -81090752 + AluSx SINE Alu 122 309 -1 1826 148 20 3 chr17 8413806 8414110 -81090443 + AluJb SINE Alu 1 309 -3 796 66 0 16 chr17 8414299 8414421 -81090132 + (TA)n Simple_repeat Simple_repeat 2 121 0 2181 42 49 7 chr17 8415140 8415425 -81089128 + AluY SINE Alu 1 297 -14 785 317 94 42 chr17 8415428 8415562 -81088991 + L2 LINE L2 2740 2866 -447 2007 131 3 0 chr17 8415562 8415890 -81088663 - AluSx SINE Alu 0 329 1 1882 152 0 0 chr17 8415892 8416188 -81088365 - AluSx SINE Alu -16 296 1 785 317 94 42 chr17 8416188 8416563 -81087990 + L2 LINE L2 2866 3295 -18 2089 129 0 0 chr17 8416569 8416871 -81087682 + AluSx SINE Alu 1 302 -10 494 263 141 57 chr17 8418693 8418990 -81085563 - L2 LINE L2 -2 3311 2990 2622 221 97 40 chr17 8420849 8421083 -81083470 - L1ME2 LINE L1 0 6164 5945 2027 78 10 34 chr17 8421083 8421377 -81083176 + AluSq SINE Alu 5 291 -22 2622 221 97 40 chr17 8421377 8422365 -81082188 - L1ME2 LINE L1 -219 5945 4873 1663 161 37 3 chr17 8422415 8422713 -81081840 - AluJo SINE Alu -4 308 1 1548 235 46 100 chr17 8422759 8422819 -81081734 + L1M4 LINE L1 3554 3616 -2530 1927 129 23 3 chr17 8422819 8423121 -81081432 + AluSx SINE Alu 1 308 -4 1548 235 46 100 chr17 8423121 8423293 -81081260 + L1M4 LINE L1 3616 3796 -2350 2191 109 0 13 chr17 8423293 8423429 -81081124 + AluSx SINE Alu 1 137 -175 2214 83 14 0 chr17 8423429 8423719 -81080834 + AluSg SINE Alu 1 294 -16 2191 109 0 13 chr17 8423719 8423894 -81080659 + AluSx SINE Alu 137 308 -4 1548 235 46 100 chr17 8423894 8423953 -81080600 + L1M4 LINE L1 3796 3857 -2289 748 162 8 0 chr17 8423953 8424070 -81080483 + FLAM_C SINE Alu 1 118 -15 1548 235 46 100 chr17 8424070 8424308 -81080245 + L1M4 LINE L1 3857 4106 -2040 2297 73 6 19 chr17 8424308 8424622 -81079931 + AluY SINE Alu 2 311 0 1548 235 46 100 chr17 8424622 8424729 -81079824 + L1M4 LINE L1 4106 4217 -1929 2441 59 3 0 chr17 8424729 8425035 -81079518 + AluY SINE Alu 1 307 -4 1880 127 0 46 chr17 8425043 8425185 -81079368 + AluSq SINE Alu 6 153 -160 2295 78 3 3 chr17 8425185 8425481 -81079072 + AluSq SINE Alu 1 296 -17 1880 127 0 46 chr17 8425481 8425661 -81078892 + AluSq SINE Alu 153 313 0 1548 235 46 100 chr17 8425661 8425735 -81078818 + L1M4 LINE L1 4224 4300 -1846 1665 106 64 8 chr17 8425735 8425999 -81078554 + AluSq SINE Alu 1 279 -34 2026 106 19 44 chr17 8425999 8426318 -81078235 + AluSx SINE Alu 1 312 0 1548 235 46 100 chr17 8426318 8426395 -81078158 + L1M4 LINE L1 4298 4313 -1833 802 168 59 77 chr17 8426395 8426615 -81077938 + MER2 DNA MER2_type 2 217 -128 230 241 35 0 chr17 8427109 8427167 -81077386 - MIR SINE MIR -3 259 200 1871 131 14 3 chr17 8427194 8427528 -81077025 + AluSq SINE Alu 1 313 0 2303 80 13 0 chr17 8427590 8427891 -81076662 + AluSp SINE Alu 1 305 -8 979 162 47 21 chr17 8428004 8428053 -81076500 + AluJo SINE Alu 88 134 -174 2126 117 0 16 chr17 8428053 8428370 -81076183 + AluSx SINE Alu 1 312 0 979 162 47 21 chr17 8428370 8428536 -81076017 + AluJo SINE Alu 134 308 0 2040 125 6 0 chr17 8428543 8428854 -81075699 + AluSq SINE Alu 1 313 0 354 242 96 45 chr17 8428999 8429197 -81075356 - L2 LINE L2 -17 3296 3089 2086 118 3 0 chr17 8429568 8429864 -81074689 + AluSx SINE Alu 1 297 -15 206 268 134 45 chr17 8429865 8430044 -81074509 - L2 LINE L2 -1810 1504 1310 1895 143 0 16 chr17 8431087 8431394 -81073159 + AluJb SINE Alu 1 302 -10 186 283 33 54 chr17 8432016 8432108 -81072445 - MIR SINE MIR -70 192 103 2296 60 7 13 chr17 8432122 8432421 -81072132 + AluY SINE Alu 1 297 -14 722 108 15 54 chr17 8433511 8433641 -81070912 - MER47A DNA MER2_type 0 366 242 2113 98 0 47 chr17 8433641 8433958 -81070595 - AluSg SINE Alu -8 302 1 1121 179 28 14 chr17 8433970 8434188 -81070365 - AluJo SINE Alu -11 301 81 868 163 0 25 chr17 8434196 8434356 -81070197 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 8434356 8434394 -81070159 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2037 74 14 11 chr17 8434394 8434677 -81069876 - AluSx SINE Alu -28 284 1 1522 192 31 3 chr17 8434679 8434971 -81069582 - AluJo SINE Alu -12 300 1 923 116 0 26 chr17 8434971 8435126 -81069427 - MER47A DNA MER2_type -116 250 100 2271 80 7 0 chr17 8435187 8435486 -81069067 + AluSx SINE Alu 1 301 -11 735 176 0 24 chr17 8435489 8435614 -81068939 + FLAM_A SINE Alu 5 126 -7 2019 138 0 0 chr17 8435615 8435913 -81068640 + AluSx SINE Alu 1 298 -14 521 217 0 19 chr17 8435928 8436034 -81068519 - MER47A DNA MER2_type -259 107 4 2147 80 23 13 chr17 8436589 8436891 -81067662 + AluSp SINE Alu 1 305 -8 246 320 58 10 chr17 8437542 8437645 -81066908 + MIR SINE MIR 110 217 -45 1853 159 10 0 chr17 8437930 8438239 -81066314 - AluJb SINE Alu 0 312 1 25 0 0 0 chr17 8439513 8439538 -81065015 + AT_rich Low_complexity Low_complexity 1 25 0 810 213 23 74 chr17 8439538 8439754 -81064799 - L1MA9 LINE L1 -2 6310 6106 2119 113 3 0 chr17 8439917 8440219 -81064334 + AluSq SINE Alu 1 303 -10 238 258 118 21 chr17 8440325 8440418 -81064135 - L2 LINE L2 -3 3310 3209 1208 113 0 6 chr17 8440554 8440731 -81063822 + AluSg/x SINE Alu 135 310 0 537 134 0 72 chr17 8440872 8440969 -81063584 + AluJo/FLAM SINE Alu 22 111 -201 2428 75 0 0 chr17 8440970 8441277 -81063276 - AluY SINE Alu -4 307 1 36 77 0 0 chr17 8441292 8441370 -81063183 + AT_rich Low_complexity Low_complexity 1 78 0 1988 101 61 7 chr17 8441386 8441682 -81062871 - AluSx SINE Alu 0 312 1 324 272 57 57 chr17 8441682 8441840 -81062713 + L1M4 LINE L1 3820 3977 -2169 1938 122 7 7 chr17 8441909 8442204 -81062349 + AluSx SINE Alu 1 295 -17 703 241 41 20 chr17 8442204 8442304 -81062249 + AluJo SINE Alu 11 107 -205 921 16 24 0 chr17 8442304 8442427 -81062126 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 2142 100 0 7 chr17 8442431 8442731 -81061822 + AluSc SINE Alu 1 298 -11 703 241 41 20 chr17 8442731 8442820 -81061733 + AluJo SINE Alu 109 209 -103 24 22 0 43 chr17 8442848 8442869 -81061684 + AT_rich Low_complexity Low_complexity 1 21 -23 2103 99 7 0 chr17 8442869 8443163 -81061390 + AluSg SINE Alu 1 296 -14 24 22 0 43 chr17 8443163 8443187 -81061366 + AT_rich Low_complexity Low_complexity 21 44 0 1999 123 0 3 chr17 8443212 8443528 -81061025 - AluSg SINE Alu 0 310 1 244 0 27 27 chr17 8443618 8443655 -81060898 + (TTATA)n Simple_repeat Simple_repeat 5 41 0 544 292 92 71 chr17 8443689 8443863 -81060690 + L1M4 LINE L1 4217 4386 -1760 2011 144 7 0 chr17 8443863 8444168 -81060385 + AluSx SINE Alu 1 307 -5 544 292 92 71 chr17 8444168 8444441 -81060112 + L1M4 LINE L1 4386 4673 -1473 2030 100 4 4 chr17 8444478 8444757 -81059796 + AluSc SINE Alu 1 279 -30 1728 108 8 4 chr17 8444770 8445029 -81059524 + AluSx SINE Alu 44 303 -9 1937 145 0 3 chr17 8445036 8445347 -81059206 + AluSx SINE Alu 1 310 -2 23 54 0 0 chr17 8445348 8445385 -81059168 + AT_rich Low_complexity Low_complexity 1 37 0 2102 107 13 13 chr17 8445450 8445760 -81058793 + AluSq SINE Alu 4 313 0 2308 102 0 9 chr17 8445947 8446262 -81058291 - AluSp SINE Alu -1 312 1 2001 142 0 3 chr17 8446266 8446575 -81057978 - AluSx SINE Alu -4 308 1 1992 147 0 0 chr17 8446683 8446982 -81057571 + AluSx SINE Alu 1 299 -13 2068 132 0 0 chr17 8447054 8447364 -81057189 + AluSx SINE Alu 1 310 -2 2160 105 10 3 chr17 8447762 8448066 -81056487 - AluSq SINE Alu -7 306 1 2241 75 3 23 chr17 8448112 8448417 -81056136 - AluSq SINE Alu -14 299 1 295 341 117 40 chr17 8448506 8448779 -81055774 + L2 LINE L2 3003 3296 -17 22 0 0 0 chr17 8449026 8449048 -81055505 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr17 8449378 8449406 -81055147 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2120 77 0 74 chr17 8449806 8450132 -81054421 + AluSp SINE Alu 1 302 -11 204 208 0 0 chr17 8450506 8450554 -81053999 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 212 162 0 0 chr17 8451394 8451431 -81053122 + (TG)n Simple_repeat Simple_repeat 2 38 0 751 111 19 0 chr17 8452239 8452347 -81052206 + FLAM_A SINE Alu 22 131 -11 314 231 108 39 chr17 8456641 8456771 -81047782 - L2 LINE L2 -10 3262 3124 2167 105 0 13 chr17 8456795 8456929 -81047624 + AluSg SINE Alu 1 135 -175 2295 56 13 20 chr17 8456929 8457232 -81047321 + AluY SINE Alu 1 301 -10 2167 105 0 13 chr17 8457232 8457403 -81047150 + AluSg SINE Alu 135 302 -8 1909 101 10 68 chr17 8457413 8457721 -81046832 + AluSq SINE Alu 1 290 -23 198 0 0 0 chr17 8457731 8457753 -81046800 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 478 395 47 13 chr17 8457783 8458082 -81046471 - L2 LINE L2 -345 2969 2661 656 189 20 59 chr17 8458082 8458190 -81046363 - MER45 DNA AcHobo 0 1581 1479 1928 126 40 3 chr17 8458190 8458491 -81046062 - AluSx SINE Alu 0 312 1 656 189 20 59 chr17 8458491 8458535 -81046018 - MER45 DNA AcHobo -102 1479 1435 1875 143 0 27 chr17 8458535 8458836 -81045717 - AluSx SINE Alu -18 294 2 325 222 37 37 chr17 8458845 8458926 -81045627 - AluJ SINE Alu -102 200 120 2404 70 0 0 chr17 8458950 8459248 -81045305 - AluSg SINE Alu -12 298 1 643 140 28 9 chr17 8459291 8459398 -81045155 - AluJ SINE Alu -195 117 9 1347 199 41 8 chr17 8459398 8459664 -81044889 - MER45B DNA AcHobo -425 615 341 1018 143 82 152 chr17 8459664 8459979 -81044574 - AluJo SINE Alu -7 305 13 1158 211 97 100 chr17 8460050 8460401 -81044152 - MER45B DNA AcHobo -690 350 1 2064 134 3 0 chr17 8460561 8460859 -81043694 - AluSx SINE Alu -13 299 1 238 272 247 19 chr17 8460915 8460981 -81043572 - L2 LINE L2 -93 3220 3170 1917 128 11 0 chr17 8460981 8461305 -81043248 - AluSx SINE Alu 0 327 1 238 272 247 19 chr17 8461305 8461395 -81043158 - L2 LINE L2 -143 3170 3027 2019 120 13 0 chr17 8461395 8461695 -81042858 - AluSx SINE Alu -8 304 1 499 184 23 0 chr17 8461700 8461787 -81042766 - FRAM SINE Alu -17 159 71 1096 149 80 0 chr17 8462109 8462297 -81042256 + AluSx SINE Alu 1 203 -109 520 82 27 0 chr17 8462297 8462370 -81042183 + AluSq/x SINE Alu 69 143 -169 1782 117 68 7 chr17 8462370 8462651 -81041902 + AluSg SINE Alu 1 298 -12 2246 88 3 0 chr17 8462651 8462945 -81041608 + AluSp SINE Alu 1 297 -16 2051 65 79 0 chr17 8462946 8463223 -81041330 + AluY SINE Alu 1 299 -12 1877 96 40 63 chr17 8463226 8463317 -81041236 + AluSx SINE Alu 1 93 -219 2290 81 7 0 chr17 8463317 8463626 -81040927 + AluSp SINE Alu 2 312 -1 1877 96 40 63 chr17 8463626 8463836 -81040717 + AluSx SINE Alu 93 295 -17 7059 110 177 90 chr17 8464512 8466072 -81038481 - pTR5 LTR ERV1 0 2438 743 866 139 0 13 chr17 8466205 8466363 -81038190 + L1MB3 LINE L1 5987 6142 -41 893 112 0 0 chr17 8466364 8466489 -81038064 + AluSg/x SINE Alu 173 297 -13 633 128 128 9 chr17 8466501 8466610 -81037943 + AluJb SINE Alu 3 124 -188 365 109 0 47 chr17 8466610 8466622 -81037931 + L1MB2 LINE L1 6111 6122 -49 1866 164 0 10 chr17 8466622 8466757 -81037796 + AluSx SINE Alu 1 136 -176 2069 77 60 0 chr17 8466757 8467042 -81037511 + AluSx SINE Alu 1 302 -10 1866 164 0 10 chr17 8467042 8467205 -81037348 + AluSx SINE Alu 136 296 -16 365 109 0 47 chr17 8467205 8467256 -81037297 + L1MB2 LINE L1 6122 6171 0 901 193 0 23 chr17 8467299 8467475 -81037078 + AluJo SINE Alu 1 172 -140 212 169 34 51 chr17 8467522 8467557 -81036996 + A-rich Low_complexity Low_complexity 2 36 -23 2077 127 3 3 chr17 8467557 8467856 -81036697 + AluSx SINE Alu 1 299 -13 2216 116 0 0 chr17 8467856 8468166 -81036387 + AluY SINE Alu 1 310 -1 212 169 34 51 chr17 8468166 8468188 -81036365 + A-rich Low_complexity Low_complexity 34 59 0 445 282 65 24 chr17 8468445 8468615 -81035938 - MIR SINE MIR -12 250 74 2095 128 0 3 chr17 8468621 8468934 -81035619 - AluSx SINE Alu 0 312 1 2226 116 0 0 chr17 8469048 8469350 -81035203 + AluSx SINE Alu 1 302 -10 2154 122 0 0 chr17 8469350 8469646 -81034907 + AluSx SINE Alu 1 296 -16 2304 78 0 0 chr17 8469646 8469942 -81034611 + AluY SINE Alu 1 296 -15 457 272 117 31 chr17 8470496 8470753 -81033800 + L2 LINE L2 2951 3229 -84 1402 61 4 2 chr17 8470755 8471019 -81033534 - AluY SINE Alu 0 311 2 335 243 0 0 chr17 8471019 8471089 -81033464 + L2 LINE L2 3179 3248 -24 2203 98 0 10 chr17 8471470 8471790 -81032763 - AluSx SINE Alu 0 312 1 2321 69 0 10 chr17 8472497 8472803 -81031750 + AluSq SINE Alu 1 303 -10 513 308 68 43 chr17 8472807 8472869 -81031684 + L2 LINE L2 3028 3087 -226 2447 64 0 3 chr17 8472869 8473181 -81031372 - AluY SINE Alu 0 311 1 513 308 68 43 chr17 8473181 8473397 -81031156 + L2 LINE L2 3087 3313 0 1566 164 27 7 chr17 8474324 8474622 -81029931 - AluJo SINE Alu -8 304 1 241 287 37 28 chr17 8475728 8475836 -81028717 + MIR SINE MIR 99 207 -55 195 129 0 0 chr17 8476550 8476581 -81027972 + (CAG)n Simple_repeat Simple_repeat 3 33 0 531 213 66 29 chr17 8477042 8477178 -81027375 + MIR SINE MIR 74 214 -48 369 0 0 0 chr17 8477370 8477411 -81027142 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 1747 140 0 18 chr17 8477411 8477696 -81026857 - AluSx SINE Alu -32 280 1 2242 100 0 0 chr17 8477708 8478009 -81026544 - AluSq SINE Alu -8 305 5 992 136 0 30 chr17 8478026 8478041 -81026512 + AluSg/x SINE Alu 122 136 -180 2140 112 3 10 chr17 8478041 8478355 -81026198 + AluSx SINE Alu 1 312 0 992 136 0 30 chr17 8478355 8478539 -81026014 + AluSg/x SINE Alu 136 316 0 2002 107 40 0 chr17 8480567 8480865 -81023688 - AluSg SINE Alu 0 310 1 2001 114 3 29 chr17 8480870 8481178 -81023375 - AluSq SINE Alu -13 300 1 2309 88 3 0 chr17 8481183 8481490 -81023063 - AluY SINE Alu -3 308 1 2264 98 3 0 chr17 8481538 8481843 -81022710 + AluSq SINE Alu 1 306 -7 1405 174 10 30 chr17 8481843 8482147 -81022406 + AluJb SINE Alu 15 312 0 * 1410 179 0 39 chr17 8482146 8482247 -81022306 + AluJb SINE Alu 27 130 -182 1972 122 28 0 chr17 8482247 8482535 -81022018 + AluSx SINE Alu 1 296 -16 1995 123 19 10 chr17 8482536 8482844 -81021709 + AluSx SINE Alu 1 311 -1 1410 179 0 39 chr17 8482844 8483025 -81021528 + AluJb SINE Alu 129 300 -12 1587 191 3 7 chr17 8483027 8483320 -81021233 + AluJb SINE Alu 1 292 -20 2060 112 10 0 chr17 8483380 8483676 -81020877 - AluSp SINE Alu -14 299 1 2244 81 0 26 chr17 8483730 8484039 -81020514 - AluY SINE Alu -10 301 1 2287 90 0 0 chr17 8484214 8484513 -81020040 + AluSx SINE Alu 1 299 -13 2218 91 0 26 chr17 8484642 8484949 -81019604 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 8485102 8485141 -81019412 + AT_rich Low_complexity Low_complexity 1 39 0 2235 93 0 19 chr17 8485162 8485472 -81019081 - AluSx SINE Alu -8 304 1 572 122 0 0 chr17 8485474 8485556 -81018997 - AluSq/x SINE Alu -176 136 55 370 191 44 0 chr17 8485580 8485648 -81018905 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1647 148 3 66 chr17 8485663 8485858 -81018695 - AluJo SINE Alu -1 311 105 1942 156 0 0 chr17 8485858 8486160 -81018393 + AluSq SINE Alu 3 304 -9 2066 123 0 13 chr17 8486168 8486477 -81018076 + AluSx SINE Alu 3 307 -5 1647 148 3 66 chr17 8486477 8486604 -81017949 - AluJo SINE Alu -214 98 1 812 231 0 0 chr17 8486682 8486842 -81017711 - FRAM SINE Alu -16 160 1 243 182 0 0 chr17 8486853 8486897 -81017656 + Alu SINE Alu 211 254 -48 1547 246 110 35 chr17 8486995 8487053 -81017500 - HAL1 LINE L1 -260 2247 2195 2188 92 7 16 chr17 8487053 8487356 -81017197 - AluSq SINE Alu -8 305 6 1547 246 110 35 chr17 8487356 8487381 -81017172 - HAL1 LINE L1 -312 2195 2173 2260 98 3 0 chr17 8487381 8487678 -81016875 - AluSp SINE Alu -15 298 1 1547 246 110 35 chr17 8487678 8488180 -81016373 - HAL1 LINE L1 -334 2173 1609 1799 136 0 106 chr17 8488180 8488510 -81016043 + AluSx SINE Alu 1 295 -7 1547 246 110 35 chr17 8488510 8488551 -81016002 - HAL1 LINE L1 -898 1609 1572 2095 111 0 14 chr17 8488553 8488850 -81015703 - AluSx SINE Alu -19 293 1 831 170 0 0 chr17 8488850 8488985 -81015568 - AluJb SINE Alu -177 135 1 295 246 0 56 chr17 8489011 8489153 -81015400 - HAL1 LINE L1 -1214 1293 1160 2075 97 32 32 chr17 8489155 8489466 -81015087 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 8489474 8489509 -81015044 + AT_rich Low_complexity Low_complexity 1 35 0 2162 113 0 3 chr17 8489822 8490131 -81014422 - AluSg SINE Alu -2 308 1 2202 71 0 55 chr17 8490135 8490461 -81014092 - AluY SINE Alu -3 308 1 1602 121 16 52 chr17 8490462 8490767 -81013786 - AluSc SINE Alu -15 294 1 824 116 31 0 chr17 8490767 8490896 -81013657 - AluJb SINE Alu -176 136 4 2002 76 3 99 chr17 8490926 8491268 -81013285 - AluSx SINE Alu -3 309 1 200 208 19 19 chr17 8491895 8491948 -81012605 + (CGG)n Simple_repeat Simple_repeat 2 54 0 188 197 0 16 chr17 8491961 8492022 -81012531 + (CGG)n Simple_repeat Simple_repeat 2 61 0 27 49 0 0 chr17 8492049 8492090 -81012463 + GC_rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr17 8492108 8492148 -81012405 + GC_rich Low_complexity Low_complexity 1 40 0 2483 52 0 3 chr17 8493764 8494072 -81010481 - AluY SINE Alu -4 307 1 2130 124 0 0 chr17 8495090 8495397 -81009156 - AluSx SINE Alu -1 311 5 257 260 14 0 chr17 8495529 8495602 -81008951 - U13 snRNA snRNA -26 78 5 994 162 9 90 chr17 8496617 8496742 -81007811 - AluSx SINE Alu -87 225 124 1032 156 0 0 chr17 8496742 8496922 -81007631 + (TA)n Simple_repeat Simple_repeat 1 180 0 994 162 9 90 chr17 8496922 8497018 -81007535 - AluSx SINE Alu -188 124 22 1178 186 0 9 chr17 8497646 8497866 -81006687 - AluJb SINE Alu 0 312 95 542 232 27 21 chr17 8497880 8498058 -81006495 - L1MA10 LINE L1 0 6334 5998 1465 177 9 78 chr17 8498141 8498475 -81006078 - AluSx SINE Alu -1 311 1 244 148 93 0 chr17 8498476 8498530 -81006023 + L1M4 LINE L1 4889 4947 -1199 836 158 8 0 chr17 8498533 8498660 -81005893 + FLAM_C SINE Alu 2 129 -14 23 0 0 0 chr17 8498660 8498683 -81005870 + AT_rich Low_complexity Low_complexity 1 23 0 639 194 8 97 chr17 8498683 8498696 -81005857 + L1M4 LINE L1 4942 4955 -1191 2031 106 16 19 chr17 8498696 8499008 -81005545 + AluSp SINE Alu 1 311 -2 639 194 8 97 chr17 8499008 8499060 -81005493 + L1M4 LINE L1 4955 5010 -1136 2000 118 7 3 chr17 8499060 8499349 -81005204 + AluSx SINE Alu 1 290 -22 639 194 8 97 chr17 8499349 8499438 -81005115 + L1M4 LINE L1 5010 5070 -1076 2297 103 3 0 chr17 8499438 8499750 -81004803 - AluSq SINE Alu 0 313 1 639 194 8 97 chr17 8499750 8499841 -81004712 + L1M4 LINE L1 5070 5167 -979 2011 128 3 0 chr17 8501389 8501700 -81002853 - AluSx SINE Alu 0 312 1 2296 92 0 3 chr17 8501764 8502067 -81002486 + AluSq SINE Alu 1 302 -11 2006 120 17 0 chr17 8502082 8502373 -81002180 - AluSx SINE Alu -16 296 1 827 193 73 73 chr17 8502421 8502639 -81001914 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 8503229 8503541 -81001012 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 8503587 8503722 -81000831 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 8504038 8504206 -81000347 - AluSg SINE Alu -11 299 148 2249 78 0 14 chr17 8504206 8504502 -81000051 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 8504502 8504645 -80999908 - AluSg SINE Alu -162 148 1 2190 105 0 0 chr17 8504846 8505140 -80999413 - AluSc SINE Alu -15 294 1 2144 110 3 0 chr17 8505588 8505889 -80998664 - AluSx SINE Alu -10 302 1 2008 132 0 0 chr17 8505895 8506183 -80998370 - AluSg SINE Alu -22 288 1 473 203 0 0 chr17 8506184 8506263 -80998290 - AluJ/FLAM SINE Alu -225 87 9 1749 116 53 32 chr17 8506298 8506582 -80997971 + AluSp SINE Alu 5 294 -19 2335 71 0 3 chr17 8506588 8506883 -80997670 + AluSq SINE Alu 1 294 -19 2046 125 13 3 chr17 8506888 8507192 -80997361 - AluSx SINE Alu -5 307 1 1735 177 3 25 chr17 8507456 8507635 -80996918 - AluSx SINE Alu -2 310 139 1751 146 38 0 chr17 8507635 8507923 -80996630 - AluSx SINE Alu -13 299 1 1735 177 3 25 chr17 8507923 8508060 -80996493 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 8508063 8508155 -80996398 - AluSg/x SINE Alu -4 306 215 418 297 195 31 chr17 8508155 8508302 -80996251 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 8508302 8508618 -80995935 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 8508618 8508792 -80995761 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 8508801 8509078 -80995475 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 8509078 8509308 -80995245 + AluSx SINE Alu 1 305 -4 2020 122 3 0 chr17 8509680 8509966 -80994587 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 8510135 8510258 -80994295 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 8510329 8510627 -80993926 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 8511041 8511331 -80993222 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 8511337 8511505 -80993048 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 8511506 8511616 -80992937 - AluJo/FLAM SINE Alu -197 115 2 1574 148 3 96 chr17 8511642 8511986 -80992567 - AluSx SINE Alu 0 312 1 2252 72 24 0 chr17 8520332 8520622 -80983931 - AluSq SINE Alu -16 297 1 2115 124 0 3 chr17 8521234 8521532 -80983021 - AluSx SINE Alu -15 297 1 2382 71 0 3 chr17 8521768 8522076 -80982477 - AluSq SINE Alu -6 307 1 1839 77 26 89 chr17 8524832 8525145 -80979408 - AluSx SINE Alu -19 293 1 202 203 25 25 chr17 8526771 8526850 -80977703 + (TGG)n Simple_repeat Simple_repeat 1 79 0 551 133 88 0 chr17 8529954 8530067 -80974486 - AluSq/x SINE Alu -190 123 1 716 329 94 13 chr17 8530073 8530447 -80974106 - L2 LINE L2 -18 3295 2892 1995 128 7 3 chr17 8530447 8530752 -80973801 + AluSx SINE Alu 1 306 -6 311 329 111 4 chr17 8530762 8530848 -80973705 + L2 LINE L2 1826 1901 -1413 2294 50 43 7 chr17 8530848 8531148 -80973405 - AluY SINE Alu 0 311 1 311 329 111 4 chr17 8531148 8531295 -80973258 + L2 LINE L2 1901 2084 -1230 285 286 0 0 chr17 8531366 8531429 -80973124 - L2 LINE L2 -2069 1245 1183 490 221 21 97 chr17 8531449 8531544 -80973009 + MIR SINE MIR 122 204 -58 2179 107 7 3 chr17 8531544 8531852 -80972701 + AluSx SINE Alu 1 309 -3 490 221 21 97 chr17 8531852 8531901 -80972652 + MIR SINE MIR 204 255 -7 203 288 25 25 chr17 8531964 8532044 -80972509 - L2 LINE L2 -2227 1087 1008 1091 80 7 20 chr17 8532108 8532258 -80972295 + AluSq/x SINE Alu 1 148 -164 27 49 0 0 chr17 8532268 8532309 -80972244 + AT_rich Low_complexity Low_complexity 1 41 0 2038 121 13 19 chr17 8532333 8532647 -80971906 - AluSx SINE Alu 0 312 1 827 193 73 73 chr17 8532695 8532913 -80971640 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 8533503 8533815 -80970738 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 8533861 8533996 -80970557 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 8534312 8534480 -80970073 - AluSg SINE Alu -11 299 148 2263 74 0 14 chr17 8534480 8534776 -80969777 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 8534776 8534919 -80969634 - AluSg SINE Alu -162 148 1 2054 131 0 3 chr17 8535120 8535418 -80969135 - AluSx SINE Alu -15 297 1 1735 177 3 25 chr17 8535682 8535861 -80968692 - AluSx SINE Alu -2 310 139 1742 146 38 0 chr17 8535861 8536148 -80968405 - AluSx SINE Alu -14 298 1 1735 177 3 25 chr17 8536148 8536285 -80968268 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 8536288 8536380 -80968173 - AluSg/x SINE Alu -4 305 214 418 297 195 31 chr17 8536380 8536527 -80968026 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 8536527 8536843 -80967710 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 8536843 8537017 -80967536 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 8537026 8537303 -80967250 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 8537303 8537533 -80967020 + AluSx SINE Alu 1 308 -4 2020 122 3 0 chr17 8537905 8538191 -80966362 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 8538360 8538483 -80966070 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 8538554 8538852 -80965701 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 8539266 8539556 -80964997 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 8539562 8539730 -80964823 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 8539731 8539841 -80964712 - AluJo/FLAM SINE Alu -197 115 2 1559 151 3 96 chr17 8539867 8540211 -80964342 - AluSx SINE Alu 0 312 1 227 189 0 0 chr17 8540740 8540793 -80963760 + GA-rich Low_complexity Low_complexity 1 53 0 396 71 0 0 chr17 8540864 8540920 -80963633 + (CCG)n Simple_repeat Simple_repeat 2 57 0 240 35 0 0 chr17 8541146 8541175 -80963378 + (CCG)n Simple_repeat Simple_repeat 2 30 0 2103 99 21 14 chr17 8746791 8747073 -80757480 + AluSx SINE Alu 18 301 -11 2248 132 13 0 chr17 8747073 8747376 -80757177 + AluSx SINE Alu 1 307 -5 196 283 67 0 chr17 8747420 8747480 -80757073 - L2 LINE L2 -8 3305 3242 632 124 10 0 chr17 8747483 8747580 -80756973 + MER4A LTR ERV1 1 98 -566 310 47 23 0 chr17 8747576 8747619 -80756934 + MER4A LTR ERV1 257 300 -364 * 2326 84 0 3 chr17 8747625 8747911 -80756642 + AluSc SINE Alu 5 289 -20 2080 152 0 3 chr17 8748710 8749019 -80755534 - AluSx SINE Alu -4 308 1 714 181 0 8 chr17 8749217 8749344 -80755209 + FLAM_C SINE Alu 1 126 -17 255 245 137 50 chr17 8749480 8749619 -80754934 + MLT1K LTR MaLR 327 477 -111 946 195 0 6 chr17 8749619 8749812 -80754741 - AluSg/x SINE Alu 0 310 132 2236 131 0 0 chr17 8749812 8750117 -80754436 - AluSx SINE Alu -7 305 1 298 268 41 0 chr17 8750117 8750214 -80754339 + MLT1K LTR MaLR 488 588 0 2504 85 0 0 chr17 8750465 8750772 -80753781 + AluSq SINE Alu 1 307 -6 418 224 51 0 chr17 8751014 8751112 -80753441 - MIR SINE MIR -132 130 28 2186 134 0 0 chr17 8751195 8751494 -80753059 - AluSx SINE Alu -11 301 3 189 181 14 42 chr17 8751604 8751676 -80752877 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 265 134 0 149 chr17 8752058 8752078 -80752475 + MER58 DNA MER1_type 2364 2385 -35 2073 89 12 77 chr17 8752078 8752405 -80752148 - AluSg SINE Alu -4 306 1 265 134 0 149 chr17 8752405 8752451 -80752102 + MER58 DNA MER1_type 2385 2420 0 277 183 54 43 chr17 8752702 8752795 -80751758 - HAL1 LINE L1 -354 2153 2060 363 175 9 85 chr17 8752871 8752967 -80751586 + AluJ/FLAM SINE Alu 1 75 -227 1042 102 88 0 chr17 8752975 8753122 -80751431 + FRAM SINE Alu 1 40 0 225 270 24 40 chr17 8753317 8753443 -80751110 - L1ME3A LINE L1 -218 5952 5829 2356 91 0 7 chr17 8753486 8753793 -80750760 + AluSg SINE Alu 1 305 -5 2413 53 57 0 chr17 8753945 8754228 -80750325 + AluY SINE Alu 1 299 -12 450 324 95 0 chr17 8754730 8754909 -80749644 - MIR SINE MIR -4 258 63 2107 128 7 16 chr17 8754909 8755214 -80749339 + AluSq SINE Alu 1 302 -11 201 39 0 0 chr17 8755324 8755350 -80749203 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 206 213 0 43 chr17 8755423 8755470 -80749083 + A-rich Low_complexity Low_complexity 5 49 0 984 182 56 5 chr17 8755686 8755884 -80748669 - MSTB1 LTR MaLR 0 432 225 617 226 74 51 chr17 8756192 8756409 -80748144 + LTR45 LTR ERV1 304 525 0 852 134 78 66 chr17 8756409 8756614 -80747939 - MSTB1 LTR MaLR -229 203 3 316 211 0 0 chr17 8756864 8756921 -80747632 - AluS SINE Alu -239 62 6 258 159 16 32 chr17 8756924 8756987 -80747566 + MLT1J LTR MaLR 441 502 -9 2401 102 0 0 chr17 8757273 8757568 -80746985 - AluSx SINE Alu -17 295 1 1264 150 40 0 chr17 8758154 8758319 -80746234 - AluSg/x SINE Alu -20 292 116 195 69 0 0 chr17 8758319 8758348 -80746205 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 1264 150 40 0 chr17 8758348 8758382 -80746171 - AluSg/x SINE Alu -196 116 85 1021 98 15 0 chr17 8758397 8758529 -80746024 - AluSg SINE Alu -176 134 1 507 257 47 34 chr17 8758533 8758681 -80745872 + L2 LINE L2 3164 3313 0 2292 93 0 3 chr17 8758906 8759197 -80745356 - AluSc SINE Alu -19 290 1 440 283 132 54 chr17 8760000 8760258 -80744295 - L2 LINE L2 -77 3195 2918 791 282 121 62 chr17 8760314 8760614 -80743939 - L2 LINE L2 -487 2827 2546 2262 103 0 0 chr17 8760614 8760895 -80743658 + AluSg SINE Alu 1 281 -29 791 282 121 62 chr17 8760895 8761175 -80743378 - L2 LINE L2 -768 2546 2213 1957 98 38 72 chr17 8761484 8761802 -80742751 + AluSp SINE Alu 1 307 -6 1187 194 166 43 chr17 8761941 8762274 -80742279 + LTR47A LTR ERVL 2 391 -61 2163 99 24 10 chr17 8762274 8762567 -80741986 - AluSx SINE Alu -6 306 10 1187 194 166 43 chr17 8762567 8762624 -80741929 + LTR47A LTR ERVL 391 440 -12 2280 89 31 0 chr17 8763248 8763539 -80741014 - AluSg SINE Alu 0 310 11 727 249 23 73 chr17 8763721 8763982 -80740571 - MER21B LTR ERV1 -151 712 465 1043 112 0 0 chr17 8763992 8764126 -80740427 + AluSq/x SINE Alu 3 136 -177 2588 74 3 0 chr17 8764126 8764438 -80740115 + AluSp SINE Alu 1 313 0 434 72 58 0 chr17 8764459 8764528 -80740025 + Alu SINE Alu 232 304 -8 2413 86 0 3 chr17 8764528 8764829 -80739724 + AluY SINE Alu 1 300 -11 1807 152 29 11 chr17 8764829 8765106 -80739447 - AluJo SINE Alu -30 282 1 229 315 14 0 chr17 8765192 8765265 -80739288 - L2 LINE L2 -41 3231 3158 294 290 14 103 chr17 8765348 8765512 -80739041 - L2 LINE L2 -261 3011 2869 2361 80 3 3 chr17 8765512 8765811 -80738742 + AluSx SINE Alu 1 299 -13 294 290 14 103 chr17 8765811 8765860 -80738693 - L2 LINE L2 -403 2869 2817 319 78 0 0 chr17 8766239 8766290 -80738263 - AluSp/q SINE Alu 0 303 253 977 122 27 0 chr17 8766296 8766443 -80738110 - AluJb SINE Alu -26 286 136 1835 157 17 7 chr17 8766444 8766743 -80737810 - AluJb SINE Alu -10 302 1 829 244 53 8 chr17 8766744 8767006 -80737547 + Charlie4a DNA MER1_type 78 351 -157 1825 176 0 23 chr17 8767008 8767315 -80737238 - AluSx SINE Alu -12 300 1 871 187 33 0 chr17 8767318 8767468 -80737085 + AluJb SINE Alu 156 310 -2 312 266 0 0 chr17 8767468 8767547 -80737006 + Charlie4a DNA MER1_type 430 508 0 1081 83 0 0 chr17 8768726 8768859 -80735694 - AluSq/x SINE Alu -179 133 1 193 88 29 0 chr17 8768868 8768902 -80735651 - MIR SINE MIR -65 143 109 1816 151 6 42 chr17 8769154 8769466 -80735087 + AluJo SINE Alu 1 301 -11 2294 104 7 10 chr17 8769797 8770104 -80734449 + AluSp SINE Alu 1 306 -7 200 314 20 0 chr17 8770119 8770170 -80734383 - L2 LINE L2 -30 3242 3191 1531 132 29 50 chr17 8770617 8770898 -80733655 + AluJb SINE Alu 1 275 -37 252 0 0 0 chr17 8770900 8770928 -80733625 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2327 84 0 20 chr17 8774233 8774365 -80730188 + AluSx SINE Alu 4 137 -175 2289 93 0 0 chr17 8774365 8774670 -80729883 + AluSg SINE Alu 2 306 0 2327 84 0 20 chr17 8774670 8774834 -80729719 + AluSx SINE Alu 137 295 -17 324 257 0 0 chr17 8775613 8775683 -80728870 + MIR SINE MIR 61 130 -78 451 286 91 48 chr17 8775836 8776001 -80728552 - MIR SINE MIR 0 262 83 2577 52 3 0 chr17 8776001 8776311 -80728242 - AluY SINE Alu 0 311 1 451 286 91 48 chr17 8776311 8776376 -80728177 - MIR SINE MIR -179 83 22 2487 67 0 0 chr17 8776376 8776673 -80727880 - AluY SINE Alu -14 297 1 2504 57 23 0 chr17 8778375 8778674 -80725879 - AluY SINE Alu -5 306 1 1276 200 148 38 chr17 8778674 8779196 -80725357 - L1MC3 LINE L1 -892 7103 6640 2289 114 0 0 chr17 8779196 8779495 -80725058 + AluSx SINE Alu 1 299 -13 1276 200 148 38 chr17 8779495 8779769 -80724784 - L1MC3 LINE L1 -1355 6640 6149 25 0 0 0 chr17 8779787 8779812 -80724741 + AT_rich Low_complexity Low_complexity 1 25 0 2152 101 3 14 chr17 8779819 8780107 -80724446 + AluSp SINE Alu 3 287 -26 396 55 0 0 chr17 8780111 8780166 -80724387 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 979 100 0 50 chr17 8780168 8780308 -80724245 + AluSc SINE Alu 1 133 -176 2489 71 3 0 chr17 8780308 8780605 -80723948 + AluY SINE Alu 1 298 -13 2347 94 3 10 chr17 8780609 8780944 -80723609 + AluSx SINE Alu 1 312 0 517 210 3 136 chr17 8780956 8781332 -80723221 - L1M4 LINE L1 -1070 5076 4751 830 213 197 8 chr17 8781838 8782077 -80722476 - MLT1K LTR MaLR -11 577 294 1911 171 47 75 chr17 8782077 8782528 -80722025 - LTR8 LTR ERV1 0 691 254 2345 103 0 3 chr17 8782532 8782834 -80721719 - AluSg SINE Alu -9 301 1 1667 183 146 84 chr17 8782834 8782892 -80721661 - LTR8 LTR ERV1 -109 582 529 2430 46 0 0 chr17 8782892 8783202 -80721351 - AluY SINE Alu 0 310 1 1667 183 146 84 chr17 8783202 8783690 -80720863 - LTR8 LTR ERV1 -162 529 1 207 0 0 0 chr17 8783704 8783727 -80720826 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2085 89 33 0 chr17 8784184 8784478 -80720075 + AluSg SINE Alu 1 303 0 991 228 14 0 chr17 8784673 8784888 -80719665 + LTR16C LTR ERVL 274 491 0 286 206 21 103 chr17 8784888 8784909 -80719644 - MIR SINE MIR -99 163 142 2526 39 0 0 chr17 8784909 8785233 -80719320 - AluY SINE Alu 0 324 1 286 206 21 103 chr17 8785233 8785307 -80719246 - MIR SINE MIR -120 142 75 2126 149 7 0 chr17 8785618 8785926 -80718627 + AluSx SINE Alu 1 310 -2 571 279 63 123 chr17 8785970 8786458 -80718095 + LTR67 LTR ERVL 99 557 0 1241 276 40 13 chr17 8786631 8787029 -80717524 - MLT1I LTR MaLR 0 409 1 2546 60 7 0 chr17 8787174 8787474 -80717079 - AluSp SINE Alu -10 303 2 2176 89 3 51 chr17 8787674 8787794 -80716759 + AluSx SINE Alu 1 125 -187 2604 66 0 0 chr17 8787794 8788099 -80716454 + AluY SINE Alu 1 305 -6 2176 89 3 51 chr17 8788099 8788291 -80716262 + AluSx SINE Alu 125 298 -14 189 181 14 42 chr17 8788562 8788634 -80715919 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2283 125 0 0 chr17 8788744 8789047 -80715506 + AluSx SINE Alu 3 305 -7 946 195 0 6 chr17 8789047 8789240 -80715313 + AluSg/x SINE Alu 132 310 0 303 269 34 139 chr17 8789240 8789564 -80714989 - MLT1K LTR MaLR -111 477 188 2079 124 10 3 chr17 8789586 8789885 -80714668 + AluSg SINE Alu 1 301 -9 21 36 0 0 chr17 8790512 8790540 -80714013 + GC_rich Low_complexity Low_complexity 1 28 0 1788 149 28 84 chr17 8791145 8791205 -80713348 + LTR56 LTR ERV1 8 70 -375 1813 118 0 0 chr17 8791205 8791451 -80713102 + AluJo SINE Alu 54 299 -13 1788 149 28 84 chr17 8791451 8791809 -80712744 + LTR56 LTR ERV1 70 400 -45 2284 112 0 6 chr17 8791809 8792121 -80712432 - AluSx SINE Alu -2 310 1 1788 149 28 84 chr17 8792121 8792165 -80712388 + LTR56 LTR ERV1 400 445 0 282 306 38 50 chr17 8793286 8793446 -80711107 + L2 LINE L2 2920 3077 -236 2550 70 3 0 chr17 8793538 8793840 -80710713 - AluSp SINE Alu -10 303 1 2304 85 0 36 chr17 8793844 8794149 -80710404 - AluSx SINE Alu -18 294 1 1101 96 0 0 chr17 8794149 8794285 -80710268 - AluSq/x SINE Alu -177 136 1 565 207 29 81 chr17 8794287 8794461 -80710092 + L2 LINE L2 3148 3312 -1 2229 131 3 0 chr17 8794507 8794812 -80709741 - AluJb SINE Alu -6 306 1 186 103 0 0 chr17 8794912 8794941 -80709612 + (CCA)n Simple_repeat Simple_repeat 2 30 0 204 279 0 0 chr17 8796016 8796059 -80708494 + (CA)n Simple_repeat Simple_repeat 2 44 0 1252 234 89 32 chr17 8796980 8797547 -80707006 + L2 LINE L2 2725 3313 0 872 102 0 36 chr17 8797554 8797691 -80706862 + FLAM_C SINE Alu 1 132 -1 2153 129 10 3 chr17 8797700 8798010 -80706543 + AluSx SINE Alu 1 312 0 706 239 11 23 chr17 8799548 8799724 -80704829 + MIR SINE MIR 71 244 -18 2372 80 13 7 chr17 8799731 8800030 -80704523 - AluSx SINE Alu -11 301 1 21 0 0 0 chr17 8800040 8800061 -80704492 + AT_rich Low_complexity Low_complexity 1 21 0 513 284 193 9 chr17 8800080 8800298 -80704255 + MIR SINE MIR 2 259 -3 1442 162 24 20 chr17 8800417 8800664 -80703889 + AluJo SINE Alu 3 250 -62 2126 110 21 0 chr17 8800732 8801014 -80703539 + AluSx SINE Alu 1 288 -24 489 219 42 8 chr17 8801249 8801368 -80703185 - MER106A DNA MER1_type -113 123 1 410 195 0 0 chr17 8801421 8801503 -80703050 - MIR SINE MIR -84 124 43 756 157 0 50 chr17 8803136 8803276 -80701277 - FLAM_C SINE Alu 0 133 1 537 286 12 12 chr17 8803769 8803849 -80700704 - MIR SINE MIR -82 180 101 2301 101 0 3 chr17 8803849 8804147 -80700406 - AluSq SINE Alu -16 297 1 537 286 12 12 chr17 8804147 8804234 -80700319 - MIR SINE MIR -160 102 13 414 0 0 0 chr17 8807734 8807780 -80696773 + (TG)n Simple_repeat Simple_repeat 2 47 0 1374 167 83 62 chr17 8807880 8808011 -80696542 + AluJo SINE Alu 3 130 -182 2353 97 0 3 chr17 8808011 8808310 -80696243 + AluSq SINE Alu 1 298 -15 1374 167 83 62 chr17 8808310 8808466 -80696087 + AluJo SINE Alu 130 296 -16 2421 102 0 0 chr17 8808474 8808777 -80695776 + AluSq SINE Alu 1 303 -10 2271 100 10 0 chr17 8809488 8809778 -80694775 - AluSx SINE Alu -18 294 2 1575 141 0 28 chr17 8809779 8810028 -80694525 + AluJo SINE Alu 67 308 -4 784 179 0 8 chr17 8811010 8811144 -80693409 + FLAM_A SINE Alu 1 133 0 2290 107 0 3 chr17 8811148 8811446 -80693107 + AluSp SINE Alu 1 297 -16 1058 146 5 47 chr17 8811720 8811912 -80692641 - AluJo SINE Alu -2 310 127 616 232 32 13 chr17 8812197 8812306 -80692247 - MIR SINE MIR -73 189 75 367 167 26 0 chr17 8812306 8812384 -80692169 + MER116 DNA Mariner 1 80 0 616 232 32 13 chr17 8812384 8812429 -80692124 - MIR SINE MIR -187 75 32 2263 95 9 25 chr17 8812477 8812792 -80691761 - AluSq SINE Alu -3 310 1 22 0 0 0 chr17 8812803 8812825 -80691728 + AT_rich Low_complexity Low_complexity 1 22 0 1669 161 13 33 chr17 8812970 8813274 -80691279 - AluJo SINE Alu -14 298 1 538 298 114 35 chr17 8813284 8813376 -80691177 - L1ME LINE L1 -297 5824 5741 2132 144 0 3 chr17 8813376 8813674 -80690879 - AluSx SINE Alu -15 297 1 538 298 114 35 chr17 8813674 8813923 -80690630 - L1ME LINE L1 -380 5741 5456 1034 91 0 8 chr17 8813923 8814055 -80690498 - AluSc SINE Alu -178 131 1 306 0 0 0 chr17 8814057 8814091 -80690462 + (TG)n Simple_repeat Simple_repeat 2 35 0 1699 116 5 0 chr17 8814105 8814329 -80690224 - AluSx SINE Alu -86 226 2 716 186 0 0 chr17 8814341 8814465 -80690088 - FLAM_C SINE Alu -9 124 1 323 245 72 10 chr17 8814469 8814616 -80689937 - L1M3 LINE L1 -741 5430 5287 375 315 0 93 chr17 8814650 8814730 -80689823 - L1ME LINE L1 -659 5462 5403 2200 101 37 3 chr17 8814730 8815027 -80689526 - AluSg SINE Alu -2 308 2 375 315 0 93 chr17 8815027 8815108 -80689445 - L1ME LINE L1 -718 5403 5316 184 206 59 59 chr17 8816101 8816169 -80688384 + L2 LINE L2 186 253 -3061 4596 140 19 29 chr17 8817035 8817915 -80686638 - pTR5 LTR ERV1 -604 1600 31 1918 109 0 0 chr17 8817968 8818216 -80686337 + AluSx SINE Alu 1 248 -64 2083 84 14 28 chr17 8818291 8818608 -80685945 - AluSp SINE Alu 0 313 1 365 117 67 0 chr17 8818953 8819013 -80685540 - Charlie8 DNA MER1_type -1001 1416 1353 628 177 8 16 chr17 8819058 8819182 -80685371 - MLT1F LTR MaLR 0 542 420 26 0 0 0 chr17 8819186 8819212 -80685341 + AT_rich Low_complexity Low_complexity 1 26 0 2410 145 25 20 chr17 8819216 8819449 -80685104 - L1MA8 LINE L1 -20 6271 6041 2361 52 55 3 chr17 8819449 8819739 -80684814 - AluY SINE Alu -5 306 2 2284 110 0 3 chr17 8819740 8820039 -80684514 - AluSq SINE Alu -14 299 2 2410 145 25 20 chr17 8820039 8820250 -80684303 - L1MA8 LINE L1 -249 6042 5823 2215 145 0 0 chr17 8820250 8820560 -80683993 - AluSq SINE Alu -3 310 1 1627 131 41 28 chr17 8820924 8821214 -80683339 + AluSp SINE Alu 1 294 -19 431 239 80 75 chr17 8821330 8821531 -80683022 + LTR67 LTR ERVL 348 549 -8 254 216 40 14 chr17 8821540 8821614 -80682939 - Charlie8 DNA MER1_type -2243 174 99 1579 154 0 82 chr17 8821624 8821807 -80682746 - AluJo SINE Alu -10 292 96 2174 111 0 54 chr17 8821807 8821954 -80682599 + AluSx SINE Alu 1 154 -158 2361 68 4 0 chr17 8821954 8822234 -80682319 + AluSp SINE Alu 1 281 -32 273 29 0 0 chr17 8822235 8822269 -80682284 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 2174 111 0 54 chr17 8822269 8822435 -80682118 + AluSx SINE Alu 153 299 -13 1579 154 0 82 chr17 8822435 8822569 -80681984 - AluJo SINE Alu -206 96 1 1075 201 4 39 chr17 8822589 8822823 -80681730 - MLT1A1 LTR MaLR 0 365 140 1039 67 0 0 chr17 8822829 8822949 -80681604 + AluSq/x SINE Alu 1 120 -193 388 80 0 0 chr17 8822953 8823003 -80681550 - AluSp SINE Alu -43 260 211 1342 137 89 117 chr17 8823003 8823464 -80681089 - LTR7 LTR ERV1 -2 448 1 1800 74 5 0 chr17 8823464 8823679 -80680874 - AluSp SINE Alu -97 216 1 463 193 42 17 chr17 8823714 8823833 -80680720 + MLT2F LTR ERVL 12 133 -530 627 250 39 34 chr17 8823851 8823962 -80680591 + MLT1I LTR MaLR 201 315 -94 1349 224 15 64 chr17 8823962 8824355 -80680198 + MLT1A2 LTR MaLR 1 374 0 627 250 39 34 chr17 8824355 8824451 -80680102 + MLT1I LTR MaLR 315 409 0 1831 174 0 0 chr17 8824671 8824975 -80679578 + AluJb SINE Alu 9 312 0 331 170 0 0 chr17 8825150 8825203 -80679350 + Tigger7 DNA MER2_type 26 78 -655 2377 102 3 0 chr17 8825207 8825510 -80679043 + AluSx SINE Alu 1 304 -8 438 177 0 0 chr17 8825749 8825828 -80678725 + FLAM_A SINE Alu 29 107 -35 4001 150 37 47 chr17 8825839 8826237 -80678316 + L1MC2 LINE L1 5186 5587 -757 1826 135 59 17 chr17 8826237 8826526 -80678027 - AluSg SINE Alu -9 301 1 4001 150 37 47 chr17 8826526 8826559 -80677994 + L1MC2 LINE L1 5587 5619 -725 2432 71 0 3 chr17 8826559 8826854 -80677699 - AluY SINE Alu -17 294 1 4001 150 37 47 chr17 8826854 8827351 -80677202 + L1MC2 LINE L1 5619 6106 -238 995 193 6 0 chr17 8827351 8827517 -80677036 + FRAM SINE Alu 1 162 -14 317 125 0 0 chr17 8827521 8827569 -80676984 + L1MC2 LINE L1 6103 6150 -194 983 85 0 0 chr17 8827569 8827698 -80676855 + AluSp/q SINE Alu 181 309 -4 2241 112 23 0 chr17 8827757 8828060 -80676493 - AluSx SINE Alu -2 310 1 2831 173 73 38 chr17 8828524 8828627 -80675926 - L1MC4 LINE L1 0 8322 8224 2447 72 7 0 chr17 8828627 8828919 -80675634 - AluSg SINE Alu -14 296 3 2831 173 73 38 chr17 8828919 8828974 -80675579 - L1MC4 LINE L1 -98 8224 8172 297 0 0 0 chr17 8828974 8829007 -80675546 + (CA)n Simple_repeat Simple_repeat 1 33 0 2831 173 73 38 chr17 8829007 8829529 -80675024 - L1MC4 LINE L1 -150 8172 7617 258 318 47 0 chr17 8829716 8829801 -80674752 + L2 LINE L2 3224 3312 -1 228 67 0 0 chr17 8830514 8830544 -80674009 + (TAA)n Simple_repeat Simple_repeat 2 31 0 234 330 23 23 chr17 8831538 8831626 -80672927 - MIR3 SINE MIR -22 186 99 1202 153 113 4 chr17 8831834 8832063 -80672490 - AluJo SINE Alu -58 254 1 2372 70 10 23 chr17 8832275 8832577 -80671976 + AluY SINE Alu 1 298 -13 2128 228 110 9 chr17 8832767 8833302 -80671251 - MLT1G1 LTR MaLR -5 590 2 2086 129 17 0 chr17 8833590 8833877 -80670676 - AluSx SINE Alu -20 292 1 402 192 14 68 chr17 8834005 8834100 -80670453 - L1MC4 LINE L1 -1339 6983 6884 2364 106 0 0 chr17 8834100 8834403 -80670150 - AluSx SINE Alu -9 303 1 402 192 14 68 chr17 8834403 8834430 -80670123 - L1MC4 LINE L1 -1438 6884 1974 331 267 82 22 chr17 8834442 8834577 -80669976 - L1M4 LINE L1 -1182 4964 4822 969 205 23 0 chr17 8834580 8834751 -80669802 - AluJb SINE Alu -1 311 137 659 275 24 29 chr17 8834846 8834987 -80669566 - Charlie8 DNA MER1_type -134 207 66 2347 113 0 0 chr17 8834987 8835289 -80669264 + AluSq SINE Alu 2 303 -10 659 275 24 29 chr17 8835289 8835354 -80669199 - Charlie8 DNA MER1_type -275 66 2 212 243 36 126 chr17 8835892 8836003 -80668550 - MIR SINE MIR -41 221 121 2235 84 6 22 chr17 8836081 8836392 -80668161 + AluSg SINE Alu 1 306 -4 292 301 58 19 chr17 8836435 8836538 -80668015 - L2 LINE L2 -2 3270 3164 2092 119 10 3 chr17 8836961 8837254 -80667299 - AluSx SINE Alu -17 295 1 2115 112 7 0 chr17 8837638 8837916 -80666637 - AluSg SINE Alu -30 280 1 2285 91 0 10 chr17 8838113 8838410 -80666143 + AluSc SINE Alu 1 294 -15 1200 117 0 6 chr17 8838410 8838573 -80665980 + AluSc SINE Alu 132 293 -16 1642 12 0 0 chr17 8838573 8838743 -80665810 - SVA Other Other -99 1287 1118 901 20 0 0 chr17 8838743 8838844 -80665709 + SVA Other Other 1284 1384 -2 696 152 80 16 chr17 8838875 8839000 -80665553 + FLAM_C SINE Alu 1 133 0 416 225 80 14 chr17 8839006 8839144 -80665409 + MLT1C LTR MaLR 27 173 -332 1080 217 34 49 chr17 8839307 8839531 -80665022 + MLT1C LTR MaLR 205 426 -41 2203 124 7 0 chr17 8839531 8839829 -80664724 - AluSx SINE Alu -12 300 1 1080 217 34 49 chr17 8839829 8839871 -80664682 + MLT1C LTR MaLR 426 467 0 2218 106 7 3 chr17 8841776 8842069 -80662484 + AluSx SINE Alu 1 294 -18 623 84 0 75 chr17 8843263 8843370 -80661183 - AluJb SINE Alu -179 133 35 * 666 180 0 9 chr17 8843369 8843480 -80661073 - AluSq/x SINE Alu -202 111 2 856 153 0 0 chr17 8843673 8843804 -80660749 + FLAM_C SINE Alu 3 133 0 10105 59 9 85 chr17 8844024 8845523 -80659030 + SVA Other Other 1 1386 0 2192 94 34 0 chr17 8845542 8845839 -80658714 + AluY SINE Alu 1 307 -4 474 292 20 64 chr17 8845851 8845890 -80658663 + MER102b DNA MER1_type 97 136 -1292 2394 81 0 0 chr17 8845890 8846185 -80658368 - AluY SINE Alu -16 295 1 474 292 20 64 chr17 8846185 8846395 -80658158 + MER102b DNA MER1_type 136 335 -6 1083 128 75 102 chr17 8846399 8846625 -80657928 - AluJb SINE Alu -6 306 87 417 279 56 9 chr17 8847140 8847302 -80657251 + MIR SINE MIR 46 223 -39 184 299 0 52 chr17 8847327 8847404 -80657149 + L2 LINE L2 2993 3065 -207 2081 133 0 16 chr17 8848922 8849231 -80655322 + AluSx SINE Alu 1 304 -8 839 126 8 8 chr17 8849251 8849378 -80655175 + AluSp/q SINE Alu 170 296 -17 277 262 177 26 chr17 8849574 8849838 -80654715 - L2 LINE L2 -56 3257 2920 478 230 119 0 chr17 8849857 8849983 -80654570 - MER5A DNA MER1_type -2 187 47 633 100 20 10 chr17 8850048 8850148 -80654405 - AluSp/q SINE Alu -1 312 212 1969 122 21 10 chr17 8850162 8850450 -80654103 + AluSx SINE Alu 1 291 -21 3271 145 46 55 chr17 8851564 8852261 -80652292 + LTR8 LTR ERV1 1 691 0 325 165 126 4 chr17 8852353 8852514 -80652039 + AluJo SINE Alu 70 282 -20 2355 73 0 10 chr17 8852514 8852816 -80651737 + AluSq SINE Alu 1 299 -14 2337 66 36 10 chr17 8854900 8854917 -80649636 - AluSq SINE Alu 0 313 298 558 0 0 0 chr17 8854917 8854979 -80649574 + (TG)n Simple_repeat Simple_repeat 2 63 0 2337 66 36 10 chr17 8854979 8855266 -80649287 - AluSq SINE Alu -15 298 1 608 265 64 23 chr17 8855374 8855593 -80648960 - MIR SINE MIR 0 262 35 785 171 16 0 chr17 8855754 8855883 -80648670 + FLAM_C SINE Alu 2 132 -11 2320 63 0 11 chr17 8855920 8856244 -80648309 + AluY SINE Alu 5 311 0 508 259 131 40 chr17 8856250 8856602 -80647951 + L1ME4a LINE L1 5613 5996 -125 22 0 0 0 chr17 8856914 8856936 -80647617 + AT_rich Low_complexity Low_complexity 1 22 0 747 158 6 11 chr17 8856953 8857130 -80647423 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 407 210 3 27 chr17 8857155 8857453 -80647100 + (TAGA)n Simple_repeat Simple_repeat 1 290 0 679 214 19 44 chr17 8857454 8857613 -80646940 - MIR SINE MIR -10 252 98 292 262 0 0 chr17 8857594 8857655 -80646898 - MIR SINE MIR -67 141 81 * 602 100 0 0 chr17 8858051 8858131 -80646422 + AluSc SINE Alu 202 281 -28 402 57 0 0 chr17 8858928 8858981 -80645572 + (CA)n Simple_repeat Simple_repeat 2 54 0 405 264 40 35 chr17 8859195 8859369 -80645184 + L3 LINE CR1 997 1171 -406 194 233 75 120 chr17 8859478 8859611 -80644942 + MER5A DNA MER1_type 3 129 -60 * 250 267 111 11 chr17 8859529 8859619 -80644934 - MER5A DNA MER1_type -27 162 64 2128 91 45 3 chr17 8859835 8860121 -80644432 + AluSx SINE Alu 1 298 -14 295 71 18 18 chr17 8860229 8860285 -80644268 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 1256 171 24 0 chr17 8860299 8860545 -80644008 + L1M3 LINE L1 5483 5734 -449 335 295 124 47 chr17 8861934 8862063 -80642490 - MER91A DNA MER1_type -36 160 22 1822 104 0 50 chr17 8862331 8862591 -80641962 - AluSx SINE Alu -65 247 1 2192 107 0 26 chr17 8862871 8863179 -80641374 - AluSx SINE Alu -11 301 2 1535 146 31 8 chr17 8863218 8863472 -80641081 + AluSx SINE Alu 1 260 -52 1570 72 5 5 chr17 8863567 8863762 -80640791 + AluY SINE Alu 1 195 -116 460 171 0 0 chr17 8864089 8864165 -80640388 + MIR3 SINE MIR 87 162 -46 2241 157 122 9 chr17 8864406 8864857 -80639696 - MLT1D LTR MaLR 0 505 4 576 239 70 35 chr17 8865905 8865988 -80638565 - L1ME LINE L1 -331 5790 5711 2352 96 0 3 chr17 8865988 8866289 -80638264 + AluSp SINE Alu 1 300 -13 576 239 70 35 chr17 8866289 8866435 -80638118 - L1ME LINE L1 -410 5711 5553 2047 68 0 0 chr17 8866448 8866684 -80637869 + AluSg SINE Alu 61 296 -14 483 96 0 14 chr17 8867411 8867484 -80637069 - MER5A DNA MER1_type -83 106 35 247 175 41 124 chr17 8867413 8867510 -80637043 + MER5A DNA MER1_type 96 184 -5 * 815 243 17 6 chr17 8867646 8867823 -80636730 + MIR SINE MIR 76 254 -8 1999 120 14 0 chr17 8867924 8868200 -80636353 + AluSg1 SINE Alu 1 280 -29 212 257 168 26 chr17 8868618 8868731 -80635822 - L2 LINE L2 -10 3262 3134 776 63 9 0 chr17 8869469 8869580 -80634973 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 261 0 0 0 chr17 8869645 8869674 -80634879 + (CA)n Simple_repeat Simple_repeat 2 30 0 2369 100 0 0 chr17 8869936 8870226 -80634327 + AluSg SINE Alu 3 292 -18 475 304 49 104 chr17 8870361 8870726 -80633827 + L2 LINE L2 2928 3272 0 2589 42 0 10 chr17 8870959 8871265 -80633288 + AluY SINE Alu 1 303 -8 1103 106 0 0 chr17 8871270 8871411 -80633142 + AluSq/x SINE Alu 1 141 -172 652 208 107 0 chr17 8871579 8871728 -80632825 - MIR SINE MIR -42 220 56 294 225 181 75 chr17 8871726 8871886 -80632667 - MIR3 SINE MIR -11 197 21 * 403 232 165 52 chr17 8872278 8872623 -80631930 + L1ME4a LINE L1 5738 6121 0 695 235 9 0 chr17 8872694 8872711 -80631842 + GA-rich Low_complexity Low_complexity 1 16 -529 1730 201 7 3 chr17 8872711 8873019 -80631534 + AluJb SINE Alu 1 309 -3 695 235 9 0 chr17 8873019 8873235 -80631318 + GA-rich Low_complexity Low_complexity 16 545 0 473 314 12 40 chr17 8873293 8873545 -80631008 + L1ME4a LINE L1 5309 5553 -2255 1377 260 72 100 chr17 8873565 8874493 -80630060 + HAL1 LINE L1 16 906 -1601 1437 148 186 11 chr17 8874493 8874756 -80629797 + AluSg1 SINE Alu 1 309 0 1377 260 72 100 chr17 8874756 8875007 -80629546 + HAL1 LINE L1 905 1162 -1345 1491 245 90 20 chr17 8875126 8875725 -80628828 + HAL1 LINE L1 1126 1766 -741 * 1613 115 0 8 chr17 8875717 8875970 -80628583 + L1MB3 LINE L1 5892 6142 -41 2173 96 0 4 chr17 8875970 8876250 -80628303 + AluSg SINE Alu 1 279 -31 1771 127 50 4 chr17 8876304 8876589 -80627964 + AluJb SINE Alu 11 307 0 1204 190 5 5 chr17 8876637 8876842 -80627711 + AluJb SINE Alu 100 304 -8 231 125 0 0 chr17 8876842 8876882 -80627671 + (GA)n Simple_repeat Simple_repeat 1 40 0 354 211 141 122 chr17 8876898 8877202 -80627351 + HAL1 LINE L1 1721 2030 -477 665 191 8 0 chr17 8877202 8877328 -80627225 + FLAM_A SINE Alu 5 131 -2 2525 58 0 0 chr17 8877339 8877631 -80626922 - AluY SINE Alu -19 292 1 935 266 64 10 chr17 8877632 8878023 -80626530 + L1ME4a LINE L1 5552 5963 -158 364 198 29 77 chr17 8879249 8879288 -80625265 + MIR SINE MIR 57 96 -139 2390 89 0 0 chr17 8879288 8879581 -80624972 + AluSx SINE Alu 3 295 -17 364 198 29 77 chr17 8879581 8879657 -80624896 + MIR SINE MIR 96 167 -68 597 92 92 0 chr17 8879757 8879844 -80624709 - AluJ/FLAM SINE Alu -216 96 2 1252 264 81 49 chr17 8879852 8879904 -80624649 - L1MC4a LINE L1 -1826 5982 5933 2486 88 0 0 chr17 8879904 8880209 -80624344 - AluSx SINE Alu -7 305 1 1252 264 81 49 chr17 8880209 8880763 -80623790 - L1MC4a LINE L1 -1875 5933 5357 2454 73 3 3 chr17 8880787 8881089 -80623464 - AluSg SINE Alu 0 310 9 2398 72 14 0 chr17 8881497 8881787 -80622766 - AluSg SINE Alu -16 294 1 203 56 83 0 chr17 8883581 8883617 -80620936 + (GCCTG)n Simple_repeat Simple_repeat 5 43 0 275 320 0 24 chr17 8884034 8884159 -80620394 + CT-rich Low_complexity Low_complexity 2 123 0 690 321 81 29 chr17 8884574 8884947 -80619606 - MARNA DNA Mariner -14 572 167 2200 110 0 13 chr17 8884947 8885248 -80619305 - AluSx SINE Alu -9 303 7 690 321 81 29 chr17 8885248 8885354 -80619199 - MARNA DNA Mariner -419 167 68 777 243 63 29 chr17 8885799 8886005 -80618548 + MIR SINE MIR 50 262 0 180 77 0 0 chr17 8886411 8886437 -80618116 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 393 257 119 9 chr17 8886444 8886553 -80618000 - L2 LINE L2 -6 3307 3187 345 336 36 7 chr17 8886670 8886810 -80617743 - MIR3 SINE MIR -16 192 49 224 227 0 67 chr17 8887218 8887293 -80617260 + CT-rich Low_complexity Low_complexity 4 73 0 25 0 0 0 chr17 8887525 8887550 -80617003 + AT_rich Low_complexity Low_complexity 1 25 0 404 261 162 0 chr17 8887550 8887692 -80616861 - MIR SINE MIR -1 261 97 216 111 0 0 chr17 8888076 8888112 -80616441 + (TC)n Simple_repeat Simple_repeat 1 36 0 330 292 104 10 chr17 8888873 8889075 -80615478 + L1ME4a LINE L1 5844 6064 -57 2059 138 7 14 chr17 8889120 8889417 -80615136 + AluSx SINE Alu 3 297 -15 2074 138 3 3 chr17 8889680 8889978 -80614575 + AluJb SINE Alu 1 298 -14 184 255 85 0 chr17 8889990 8890037 -80614516 - L2 LINE L2 -1 3312 3262 1481 235 7 0 chr17 8890164 8890470 -80614083 - AluJo SINE Alu -4 308 1 338 263 183 0 chr17 8890494 8890631 -80613922 + L2 LINE L2 3151 3312 -1 2226 114 0 22 chr17 8891799 8892116 -80612437 + AluSx SINE Alu 1 310 -2 218 280 0 0 chr17 8892195 8892245 -80612308 - L2 LINE L2 -3 3310 3261 434 266 50 50 chr17 8892451 8892650 -80611903 + L2 LINE L2 3114 3312 -1 383 0 21 0 chr17 8892695 8892742 -80611811 + (TG)n Simple_repeat Simple_repeat 2 49 0 2336 110 0 0 chr17 8892743 8893043 -80611510 - AluSg SINE Alu -10 300 1 2250 97 14 0 chr17 8893063 8893353 -80611200 - AluY SINE Alu -17 294 1 26 64 0 0 chr17 8893353 8893400 -80611153 + AT_rich Low_complexity Low_complexity 1 47 0 415 302 93 80 chr17 8893651 8894091 -80610462 - L2 LINE L2 -1 3271 2826 461 236 34 61 chr17 8895764 8895912 -80608641 + MIR SINE MIR 103 246 -16 538 283 71 49 chr17 8895930 8896156 -80608397 + MIR SINE MIR 2 232 -30 7172 122 23 60 chr17 8896156 8896258 -80608295 - HSMAR2 DNA Mariner 0 1302 1198 1873 140 49 11 chr17 8896258 8896544 -80608009 - AluSx SINE Alu -15 297 1 7172 122 23 60 chr17 8896544 8896686 -80607867 - HSMAR2 DNA Mariner -104 1198 1052 398 75 15 0 chr17 8896686 8896753 -80607800 + (TA)n Simple_repeat Simple_repeat 2 69 0 7172 122 23 60 chr17 8896753 8896778 -80607775 - HSMAR2 DNA Mariner -250 1052 1028 2498 59 0 0 chr17 8896778 8897065 -80607488 - AluY SINE Alu -24 287 1 7172 122 23 60 chr17 8897065 8898063 -80606490 - HSMAR2 DNA Mariner -274 1028 81 850 172 0 8 chr17 8898063 8898197 -80606356 - FLAM_C SINE Alu 0 133 1 7172 122 23 60 chr17 8898197 8898252 -80606301 - HSMAR2 DNA Mariner -1221 81 26 2561 28 7 0 chr17 8898646 8898956 -80605597 + AluSq SINE Alu 1 287 -26 372 307 154 36 chr17 8899139 8899445 -80605108 - L2 LINE L2 0 3313 2972 23 0 0 0 chr17 8900006 8900029 -80604524 + GC_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr17 8901079 8901112 -80603441 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 8901208 8901230 -80603323 + AT_rich Low_complexity Low_complexity 1 22 0 2202 82 7 0 chr17 8901821 8902113 -80602440 - AluSg SINE Alu -16 294 1 501 268 80 74 chr17 8902318 8902370 -80602183 - MARNA DNA Mariner -201 385 335 1713 176 3 3 chr17 8902370 8902672 -80601881 - AluJb SINE Alu -10 302 1 501 268 80 74 chr17 8902672 8902782 -80601771 - MARNA DNA Mariner -251 335 227 2294 73 3 16 chr17 8902782 8903096 -80601457 - AluY SINE Alu -1 310 1 2058 99 6 41 chr17 8903096 8903410 -80601143 - AluSq SINE Alu -10 303 1 501 268 80 74 chr17 8903410 8903581 -80600972 - MARNA DNA Mariner -358 228 48 848 188 90 106 chr17 8903636 8903891 -80600662 - MIR SINE MIR -10 252 2 2148 107 7 0 chr17 8904092 8904392 -80600161 + AluSg SINE Alu 1 302 -8 273 242 44 0 chr17 8905626 8905717 -80598836 - HAL1 LINE L1 -698 1809 1715 848 128 5 138 chr17 8906274 8906462 -80598091 - FRAM SINE Alu -13 163 1 2318 57 33 10 chr17 8906634 8906935 -80597618 - AluY SINE Alu -3 308 1 206 214 107 71 chr17 8907006 8907090 -80597463 - L2 LINE L2 -5 3308 3222 239 328 121 35 chr17 8907197 8907395 -80597158 - L2 LINE L2 -215 3057 2843 1316 173 191 8 chr17 8908913 8909300 -80595253 - Charlie4a DNA MER1_type -3 505 48 2094 128 0 0 chr17 8911001 8911299 -80593254 - AluSx SINE Alu -14 298 1 535 70 14 0 chr17 8911859 8911930 -80592623 - MER51A LTR ERV1 -284 350 279 * 811 129 0 0 chr17 8911926 8912052 -80592501 - MER51A LTR ERV1 -501 133 18 1434 140 53 4 chr17 8912567 8912795 -80591758 - MER8 DNA MER2_type 0 239 1 2172 97 0 0 chr17 8912849 8913137 -80591416 - AluSg SINE Alu -22 288 1 608 228 16 0 chr17 8913162 8913285 -80591268 - FLAM_C SINE Alu -18 125 1 2691 164 50 2 chr17 8913285 8913766 -80590787 - L1MB2 LINE L1 -43 6128 5625 2280 82 0 20 chr17 8913857 8914160 -80590393 + AluSx SINE Alu 1 297 -15 403 262 162 26 chr17 8915072 8915301 -80589252 - L1ME4a LINE L1 -4 6117 5858 608 147 86 0 chr17 8915741 8915857 -80588696 - MER3 DNA MER1_type 0 209 84 346 19 75 0 chr17 8916526 8916579 -80587974 + CT-rich Low_complexity Low_complexity 2 58 0 2119 126 10 0 chr17 8916586 8916895 -80587658 - AluSq SINE Alu -1 312 1 507 293 61 12 chr17 8917039 8917203 -80587350 - L2 LINE L2 -24 3289 3118 367 224 370 5 chr17 8917214 8917406 -80587147 - MIR SINE MIR 0 262 1 386 293 77 28 chr17 8917483 8917770 -80586783 + L1ME LINE L1 4513 4813 -1333 254 308 94 6 chr17 8917831 8917990 -80586563 + L1ME LINE L1 4901 5073 -1073 367 331 70 6 chr17 8918059 8918216 -80586337 + L1ME LINE L1 5232 5398 -748 586 279 149 30 chr17 8918224 8918525 -80586028 + L1ME LINE L1 5456 5792 -329 2372 62 3 7 chr17 8919262 8919568 -80584985 + AluSq SINE Alu 1 305 -8 239 248 106 26 chr17 8920149 8920262 -80584291 - HAL1 LINE L1 -99 2408 2287 25 51 0 0 chr17 8920265 8920304 -80584249 + AT_rich Low_complexity Low_complexity 1 39 0 2287 101 0 0 chr17 8920350 8920656 -80583897 - AluSx SINE Alu -6 306 1 334 344 78 7 chr17 8921129 8921283 -80583270 - HAL1 LINE L1 -698 1809 1645 210 244 61 17 chr17 8921696 8921811 -80582742 + (TATATG)n Simple_repeat Simple_repeat 5 124 0 349 337 203 11 chr17 8921840 8922318 -80582235 + L2 LINE L2 1772 2341 -973 189 0 0 0 chr17 8922406 8922427 -80582126 + (TG)n Simple_repeat Simple_repeat 2 22 0 1880 148 0 16 chr17 8922578 8922889 -80581664 - AluSx SINE Alu -6 306 1 322 283 28 78 chr17 8924678 8924858 -80579695 - L1ME4a LINE L1 -189 5932 5762 770 109 78 16 chr17 8925272 8925400 -80579153 - AluJo SINE Alu -176 136 1 202 211 0 0 chr17 8926661 8926699 -80577854 + (TG)n Simple_repeat Simple_repeat 2 39 0 308 196 62 52 chr17 8930112 8930209 -80574344 + L1MC4 LINE L1 6608 6705 -1337 527 239 22 50 chr17 8930326 8930506 -80574047 - L1ME4a LINE L1 -206 5915 5741 1941 91 0 0 chr17 8932616 8932868 -80571685 + AluSg SINE Alu 36 287 -23 21 0 0 0 chr17 8933490 8933511 -80571042 + AT_rich Low_complexity Low_complexity 1 21 0 339 89 0 0 chr17 8933518 8933563 -80570990 - HY4 scRNA scRNA -3 90 46 1943 93 30 43 chr17 8933563 8933865 -80570688 - AluSx SINE Alu -14 298 1 344 129 106 129 chr17 8934917 8935002 -80569551 - HsTC2 DNA Tc2 -349 1549 1291 1255 104 6 0 chr17 8935002 8935185 -80569368 - AluSp SINE Alu -7 306 123 271 149 21 0 chr17 8935185 8935232 -80569321 - HsTC2 DNA Tc2 -595 1303 1256 235 176 98 0 chr17 8935233 8935284 -80569269 - HsTC2 DNA Tc2 -1763 135 80 1744 118 7 36 chr17 8936229 8936534 -80568019 + AluSx SINE Alu 1 296 -16 2054 114 3 10 chr17 8937045 8937343 -80567210 - AluSx SINE Alu -16 296 1 491 259 175 0 chr17 8940115 8940258 -80564295 - MER58C DNA MER1_type -29 186 19 467 284 8 8 chr17 8941837 8941964 -80562589 - L2 LINE L2 -7 3306 3180 2081 98 0 3 chr17 8942593 8942889 -80561664 - AluSx SINE Alu -17 295 1 625 257 163 33 chr17 8944439 8944801 -80559752 + L2 LINE L2 2405 2813 -501 397 278 103 8 chr17 8945984 8946110 -80558443 - MIR3 SINE MIR -64 144 7 693 271 50 13 chr17 8946880 8947179 -80557374 + L1MB8 LINE L1 2788 3097 -3049 513 263 80 6 chr17 8947224 8947399 -80557154 - L1MEd LINE L1 -5900 219 32 407 218 228 0 chr17 8948184 8948285 -80556268 - FLAM_C SINE Alu -9 124 1 313 188 43 29 chr17 8948310 8948379 -80556174 - L1ME4a LINE L1 0 6121 6052 3257 195 57 62 chr17 8948385 8949322 -80555231 + L1MB8 LINE L1 3689 4620 -1526 239 164 104 0 chr17 8949362 8949429 -80555124 + L1MB8 LINE L1 5229 5302 -844 3831 173 35 20 chr17 8949435 8950214 -80554339 + L1MB8 LINE L1 5389 6178 0 463 214 92 0 chr17 8950286 8950384 -80554169 + AluJb SINE Alu 199 305 -7 315 0 0 0 chr17 8950401 8950436 -80554117 + (A)n Simple_repeat Simple_repeat 1 35 0 242 159 45 102 chr17 8950657 8950745 -80553808 - L1ME LINE L1 -372 5749 5667 1504 229 28 30 chr17 8951111 8951538 -80553015 + L1MB8 LINE L1 5753 6178 0 331 247 93 41 chr17 8951611 8951708 -80552845 + FRAM SINE Alu 64 165 -1 318 303 81 66 chr17 8951730 8951928 -80552625 - L1ME4a LINE L1 -49 6072 5872 285 150 46 100 chr17 8951972 8952069 -80552484 - L1ME4a LINE L1 -372 5749 5667 1627 173 198 29 chr17 8954070 8954550 -80550003 + MLT1F1 LTR MaLR 5 565 -2 2126 108 0 0 chr17 8954602 8954889 -80549664 + AluSx SINE Alu 1 287 -25 342 0 0 0 chr17 8954889 8954927 -80549626 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr17 8955349 8955372 -80549181 + AT_rich Low_complexity Low_complexity 1 23 0 292 330 51 0 chr17 8956744 8956899 -80547654 - MIR SINE MIR -65 143 16 200 233 0 0 chr17 8957799 8957842 -80546711 + T-rich Low_complexity Low_complexity 1 43 0 1860 126 56 0 chr17 8958258 8958543 -80546010 + AluSx SINE Alu 1 301 -11 229 250 62 0 chr17 8959736 8959800 -80544753 + L2 LINE L2 3204 3271 -1 2103 89 7 3 chr17 8960896 8961189 -80543364 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 8961263 8961285 -80543268 + AT_rich Low_complexity Low_complexity 1 22 0 221 331 29 29 chr17 8961555 8961694 -80542859 + MIR SINE MIR 6 144 -118 2945 192 22 0 chr17 8961894 8962431 -80542122 + MER68 LTR ERV1 14 562 0 505 199 50 71 chr17 8962566 8962638 -80541915 - MER2 DNA MER2_type 0 345 276 2463 74 0 0 chr17 8962638 8962948 -80541605 + AluY SINE Alu 1 310 -1 505 199 50 71 chr17 8962948 8963016 -80541537 - MER2 DNA MER2_type -69 276 208 549 270 29 64 chr17 8963161 8963336 -80541217 - L1ME LINE L1 -397 5724 5555 2194 98 0 3 chr17 8963336 8963643 -80540910 + AluY SINE Alu 1 306 -5 549 270 29 64 chr17 8963643 8963671 -80540882 - L1ME LINE L1 -566 5555 5528 245 304 0 0 chr17 8964324 8964380 -80540173 + L2 LINE L2 3258 3313 0 810 289 44 8 chr17 8964676 8964925 -80539628 + MIR SINE MIR 4 261 -1 861 191 51 0 chr17 8965928 8966085 -80538468 + AluJb SINE Alu 144 308 -4 225 0 0 0 chr17 8967251 8967276 -80537277 + (TG)n Simple_repeat Simple_repeat 2 26 0 280 210 16 0 chr17 8967312 8967374 -80537179 - L3b LINE CR1 -350 1233 1171 2367 73 3 3 chr17 8967771 8968084 -80536469 + AluSp SINE Alu 1 313 0 227 250 42 108 chr17 8969831 8969951 -80534602 - MIR SINE MIR -97 111 12 2082 116 7 0 chr17 8970469 8970770 -80533783 + AluSx SINE Alu 1 303 -9 2202 107 3 3 chr17 8972460 8972770 -80531783 + AluSq SINE Alu 1 310 -3 591 200 25 0 chr17 8972817 8972937 -80531616 - AluJo/FRAM SINE Alu -14 298 176 1393 161 17 0 chr17 8972937 8973173 -80531380 - AluJo SINE Alu -72 240 1 269 284 71 43 chr17 8973549 8973583 -80530970 + L2 LINE L2 3125 3157 -115 3099 169 30 40 chr17 8973583 8974191 -80530362 + MER7C DNA MER2_type 1 602 0 269 284 71 43 chr17 8974191 8974297 -80530256 + L2 LINE L2 3157 3269 -3 21 0 0 0 chr17 8974521 8974542 -80530011 + AT_rich Low_complexity Low_complexity 1 21 0 311 288 121 44 chr17 8974782 8974811 -80529742 + L1ME4a LINE L1 5409 5434 -736 1887 78 0 16 chr17 8974811 8975069 -80529484 - AluY SINE Alu -14 297 44 311 288 121 44 chr17 8975069 8975288 -80529265 + L1ME4a LINE L1 5434 5683 -487 352 285 139 7 chr17 8975298 8975442 -80529111 + L1ME4a LINE L1 5710 5872 -249 609 150 0 9 chr17 8975713 8975786 -80528767 + L1MA2 LINE L1 6193 6266 -38 444 82 0 0 chr17 8975786 8975847 -80528706 + (TA)n Simple_repeat Simple_repeat 2 62 0 609 150 0 9 chr17 8975847 8975886 -80528667 + L1MA2 LINE L1 6266 6304 0 399 115 16 0 chr17 8975895 8975956 -80528597 + U7 snRNA snRNA 1 62 -1 2337 87 3 0 chr17 8976008 8976320 -80528233 + AluSq SINE Alu 1 313 0 782 228 14 27 chr17 8976463 8976682 -80527871 - L1MC5 LINE L1 -49 7912 7697 206 341 112 28 chr17 8979733 8979912 -80524641 + L2 LINE L2 3078 3271 -1 2280 93 0 3 chr17 8980305 8980615 -80523938 - AluSx SINE Alu -3 309 1 2388 56 0 10 chr17 8981628 8981931 -80522622 + AluY SINE Alu 1 300 -11 229 337 27 53 chr17 8982311 8982498 -80522055 + L2 LINE L2 2508 2689 -625 364 332 131 9 chr17 8982558 8982787 -80521766 + L2 LINE L2 2829 3085 -228 225 0 0 0 chr17 8982795 8982820 -80521733 + (TG)n Simple_repeat Simple_repeat 1 25 0 396 0 0 0 chr17 8982874 8982918 -80521635 + (TG)n Simple_repeat Simple_repeat 2 45 0 1753 154 0 3 chr17 8982918 8983203 -80521350 - AluJb SINE Alu -28 284 1 406 261 0 0 chr17 8984191 8984279 -80520274 + L1ME3 LINE L1 6075 6162 0 347 256 122 12 chr17 8984818 8984982 -80519571 + L1ME4a LINE L1 5936 6117 -4 2011 87 11 3 chr17 8985007 8985294 -80519259 + AluY SINE Alu 21 309 -2 230 299 112 10 chr17 8987029 8987171 -80517382 - MIR SINE MIR -36 226 59 200 322 58 11 chr17 8988032 8988119 -80516434 + L2 LINE L2 3223 3313 0 652 314 79 48 chr17 8988381 8988839 -80515714 - L2 LINE L2 -620 2694 2223 2249 103 0 28 chr17 8988928 8989249 -80515304 + AluSx SINE Alu 1 312 0 356 267 50 10 chr17 8989665 8989766 -80514787 + MIR SINE MIR 71 175 -87 1421 176 9 46 chr17 8990073 8990397 -80514156 + AluSx SINE Alu 1 312 0 363 250 77 10 chr17 8990811 8990915 -80513638 + MIR SINE MIR 71 181 -81 217 355 18 9 chr17 8991033 8991143 -80513410 + L2 LINE L2 2941 3051 -221 237 273 91 0 chr17 8991374 8991429 -80513124 + L2 LINE L2 3249 3308 -5 2193 107 0 0 chr17 8991706 8992006 -80512547 - AluSg SINE Alu -10 300 1 187 255 43 0 chr17 8992886 8992933 -80511620 + L2 LINE L2 3202 3250 -22 271 264 0 14 chr17 8995192 8995264 -80509289 - L2 LINE L2 -49 3223 3153 965 96 0 22 chr17 8997470 8997606 -80506947 - FLAM_C SINE Alu 0 133 1 239 281 0 0 chr17 8999475 8999532 -80505021 + MIR SINE MIR 206 262 0 2112 88 0 0 chr17 9002466 9002729 -80501824 + AluSg SINE Alu 33 295 -15 1107 183 18 9 chr17 9002733 9002957 -80501596 + L1MB7 LINE L1 5940 6165 -19 2269 105 0 13 chr17 9004110 9004425 -80500128 - AluSq SINE Alu -2 311 1 1730 197 53 26 chr17 9004750 9005167 -80499386 + MSTC LTR MaLR 1 428 0 1790 185 7 3 chr17 9005506 9005804 -80498749 - AluJo SINE Alu -13 299 1 2062 135 0 16 chr17 9005907 9006210 -80498343 - AluSx SINE Alu -14 298 1 204 231 41 99 chr17 9008655 9008776 -80495777 + L2 LINE L2 3137 3250 -22 226 283 17 0 chr17 9009222 9009282 -80495271 + L2 LINE L2 3168 3228 -44 2318 82 14 0 chr17 9009396 9009687 -80494866 - AluSg1 SINE Alu -14 295 1 484 255 31 46 chr17 9009933 9010129 -80494424 - L1MC4a LINE L1 -1926 5882 5690 458 346 42 4 chr17 9010159 9010399 -80494154 - L1MC4a LINE L1 -1610 4536 4288 356 285 242 29 chr17 9010881 9011323 -80493230 + L2 LINE L2 2781 3312 -1 2295 105 0 0 chr17 9011978 9012274 -80492279 - AluSx SINE Alu -16 296 1 1912 149 23 7 chr17 9012823 9013124 -80491429 - 7SLRNA srpRNA srpRNA -14 306 1 411 89 65 8 chr17 9013632 9013755 -80490798 + (TA)n Simple_repeat Simple_repeat 2 131 0 420 216 52 45 chr17 9013804 9013938 -80490615 + Charlie8 DNA MER1_type 87 221 -2196 210 37 0 0 chr17 9015611 9015638 -80488915 + (TCTCCC)n Simple_repeat Simple_repeat 3 29 0 6926 66 17 6 chr17 9015638 9017067 -80487486 + SVA Other Other 53 1380 -6 25 0 0 0 chr17 9017067 9017092 -80487461 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr17 9017712 9017743 -80486810 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr17 9018079 9018115 -80486438 + AT_rich Low_complexity Low_complexity 1 36 0 262 345 84 28 chr17 9018450 9018592 -80485961 - MIR SINE MIR -112 150 1 21 36 0 0 chr17 9020145 9020173 -80484380 + AT_rich Low_complexity Low_complexity 1 28 0 320 338 108 33 chr17 9020277 9020582 -80483971 + L1ME1 LINE L1 3364 3691 -2455 2194 104 0 10 chr17 9020584 9020883 -80483670 + AluSx SINE Alu 1 296 -16 971 73 0 0 chr17 9020926 9021049 -80483504 + AluSc SINE Alu 187 309 0 1846 223 40 29 chr17 9021182 9021733 -80482820 + L1ME1 LINE L1 4611 5167 -979 2489 234 50 18 chr17 9021842 9022565 -80481988 + L1ME1 LINE L1 5397 6142 -24 298 200 0 0 chr17 9022655 9022710 -80481843 + U6 snRNA snRNA 48 102 -5 194 79 0 26 chr17 9024290 9024328 -80480225 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 4523 182 74 19 chr17 9024482 9025619 -80478934 - Looper DNA T2_type -358 1200 1 237 196 0 0 chr17 9029692 9029743 -80474810 + A-rich Low_complexity Low_complexity 3 53 0 294 317 33 17 chr17 9030378 9030498 -80474055 + L2 LINE L2 3188 3309 -4 329 254 98 16 chr17 9030539 9030661 -80473892 - L2 LINE L2 -77 3236 3105 371 318 31 87 chr17 9030722 9031011 -80473542 - L2 LINE L2 -749 2565 2293 212 189 0 0 chr17 9031012 9031049 -80473504 + L2 LINE L2 3259 3295 -18 873 200 51 33 chr17 9031773 9031988 -80472565 - MER20 DNA MER1_type 0 219 1 1758 214 81 36 chr17 9032082 9032577 -80471976 + MLT1F LTR MaLR 26 542 0 1404 159 12 4 chr17 9033264 9033516 -80471037 + MLT1B LTR MaLR 1 254 -136 1150 247 47 14 chr17 9033648 9034008 -80470545 + MER87 LTR ERV1 168 539 -2 793 141 7 14 chr17 9034009 9034151 -80470402 + MLT1B LTR MaLR 250 390 0 295 211 0 0 chr17 9034730 9034782 -80469771 + AluJ/monomer SINE Alu 1 52 -250 2332 204 81 22 chr17 9034927 9036047 -80468506 + L1ME1 LINE L1 4330 5742 -424 1822 129 37 55 chr17 9036047 9036395 -80468158 + MER2 DNA MER2_type 3 344 0 2332 204 81 22 chr17 9036395 9036614 -80467939 + L1ME1 LINE L1 5742 5947 -219 2421 87 7 0 chr17 9036836 9037146 -80467407 - AluSp SINE Alu -1 312 1 2136 104 14 10 chr17 9037570 9037867 -80466686 - AluSx SINE Alu -14 298 1 216 214 0 0 chr17 9038046 9038102 -80466451 + GA-rich Low_complexity Low_complexity 4 59 0 322 229 43 0 chr17 9038529 9038599 -80465954 + HAL1 LINE L1 2030 2102 -405 343 116 0 29 chr17 9038707 9038776 -80465777 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 211 193 0 35 chr17 9038794 9038851 -80465702 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 2114 107 7 23 chr17 9039036 9039336 -80465217 - AluSg SINE Alu -15 295 1 1171 77 0 6 chr17 9039399 9039555 -80464998 - AluY SINE Alu -12 299 145 398 288 131 76 chr17 9039990 9040129 -80464424 - L1M4 LINE L1 -3060 3086 2956 2100 141 0 0 chr17 9040129 9040426 -80464127 - AluJb SINE Alu -15 297 1 398 288 131 76 chr17 9040426 9040905 -80463648 - L1M4 LINE L1 -3190 2956 2434 323 188 62 0 chr17 9040909 9041005 -80463548 + L2 LINE L2 1301 1402 -1912 484 342 131 47 chr17 9041344 9042407 -80462146 - L2 LINE L2 -1908 1406 255 378 60 0 0 chr17 9043146 9043196 -80461357 - L2 LINE L2 0 3313 3264 233 309 29 91 chr17 9043283 9043398 -80461155 + L3 LINE CR1 636 738 -839 2260 93 0 10 chr17 9043398 9043699 -80460854 - AluY SINE Alu -13 298 1 233 309 29 91 chr17 9043699 9043758 -80460795 + L3 LINE CR1 738 799 -778 1155 139 0 48 chr17 9044036 9044245 -80460308 + AluJo SINE Alu 98 296 -16 287 329 100 7 chr17 9044341 9044481 -80460072 - MIR SINE MIR -18 244 92 284 200 78 0 chr17 9044513 9044603 -80459950 + Charlie5 DNA MER1_type 2508 2604 -8 1972 48 0 0 chr17 9046182 9046410 -80458143 - AluY SINE Alu -6 305 78 1745 102 91 18 chr17 9046514 9046799 -80457754 + AluY SINE Alu 1 306 -5 291 28 0 0 chr17 9047242 9047278 -80457275 + (TG)n Simple_repeat Simple_repeat 1 36 0 234 0 0 0 chr17 9047277 9047303 -80457250 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 225 240 27 67 chr17 9047347 9047422 -80457131 + L2 LINE L2 3201 3272 0 1168 82 38 43 chr17 9047438 9047622 -80456931 - MER30B DNA MER1_type -4 186 4 3353 162 59 12 chr17 9048872 9049551 -80455002 + L1MB8 LINE L1 5451 6161 -17 888 210 25 0 chr17 9050985 9051147 -80453406 - FRAM SINE Alu 0 166 1 28 0 0 0 chr17 9051149 9051177 -80453376 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 9051428 9051449 -80453104 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 9051509 9051539 -80453014 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr17 9052435 9052475 -80452078 + AT_rich Low_complexity Low_complexity 1 40 0 2082 148 0 0 chr17 9052540 9052837 -80451716 - AluSx SINE Alu -15 297 1 1857 141 4 4 chr17 9053237 9053506 -80451047 - AluSx SINE Alu 0 312 44 1607 176 31 7 chr17 9054010 9054299 -80450254 + AluJo SINE Alu 1 296 -16 299 269 59 17 chr17 9054431 9054550 -80450003 + MIR3 SINE MIR 71 194 -14 1168 125 0 0 chr17 9054983 9055143 -80449410 + AluSg/x SINE Alu 134 293 -19 347 325 81 61 chr17 9055726 9056225 -80448328 - L2 LINE L2 0 3272 2761 207 217 67 0 chr17 9056653 9056713 -80447840 + MIR SINE MIR 114 177 -85 470 257 193 23 chr17 9056836 9057054 -80447499 + MIR SINE MIR 1 255 -7 194 125 0 25 chr17 9057070 9057110 -80447443 + (ATG)n Simple_repeat Simple_repeat 1 39 0 243 138 36 6 chr17 9058424 9058480 -80446073 - LTR29 LTR ERV1 -66 556 513 1477 201 95 22 chr17 9059354 9059763 -80444790 - LTR56 LTR ERV1 0 445 7 2274 99 3 0 chr17 9059837 9060148 -80444405 - AluSp SINE Alu 0 312 1 215 170 21 0 chr17 9060172 9060219 -80444334 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 305 311 0 0 chr17 9060227 9060317 -80444236 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr17 9060317 9060340 -80444213 + (TA)n Simple_repeat Simple_repeat 1 23 0 319 96 164 45 chr17 9060350 9060447 -80444106 - LTR48B LTR ERV1 -38 749 499 317 225 110 38 chr17 9060706 9060872 -80443681 + L1ME2 LINE L1 5978 6154 -10 291 186 108 0 chr17 9061308 9061410 -80443143 + MER34 LTR ERV1 425 537 -5 329 275 75 0 chr17 9061443 9061563 -80442990 + L1MC4 LINE L1 7913 8041 -1 440 231 146 31 chr17 9062250 9062380 -80442173 + MLT1H LTR MaLR 405 549 0 961 324 109 31 chr17 9062438 9063733 -80440820 + L2 LINE L2 1328 2723 -591 361 314 35 30 chr17 9064418 9064587 -80439966 + MER5A DNA MER1_type 18 187 -2 402 236 14 56 chr17 9064900 9065044 -80439509 - MIR SINE MIR -108 154 17 2069 141 3 0 chr17 9065338 9065643 -80438910 - AluJb SINE Alu -6 306 1 2614 63 0 0 chr17 9065905 9066208 -80438345 - AluY SINE Alu -8 303 1 196 275 100 12 chr17 9066428 9066508 -80438045 + MIR SINE MIR 54 140 -68 3310 236 45 27 chr17 9067237 9067963 -80436590 + L1M4 LINE L1 3029 3782 -2364 459 0 0 0 chr17 9067963 9068014 -80436539 + (TA)n Simple_repeat Simple_repeat 1 51 0 3310 236 45 27 chr17 9068014 9068356 -80436197 + L1M4 LINE L1 3782 4116 -2030 1949 145 0 22 chr17 9068928 9069213 -80435340 + AluJo SINE Alu 1 280 -32 329 0 0 24 chr17 9069213 9069255 -80435298 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1949 145 0 22 chr17 9069255 9069287 -80435266 + AluJo SINE Alu 280 311 -1 274 257 18 55 chr17 9069675 9069784 -80434769 + L1ME4a LINE L1 5847 5951 -170 194 311 136 0 chr17 9069859 9069962 -80434591 + L2 LINE L2 3181 3297 -16 1107 175 28 0 chr17 9070417 9070628 -80433925 - MIR SINE MIR -23 239 23 207 69 0 0 chr17 9071977 9072006 -80432547 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 408 254 129 40 chr17 9073162 9073363 -80431190 + MIR SINE MIR 38 256 -6 271 178 0 0 chr17 9073430 9073475 -80431078 - tRNA-Thr-ACT tRNA tRNA -32 45 1 601 258 107 24 chr17 9073481 9073772 -80430781 - L3 LINE CR1 -701 876 562 32 0 0 0 chr17 9075145 9075177 -80429376 + AT_rich Low_complexity Low_complexity 1 32 0 292 133 82 0 chr17 9075468 9075529 -80429024 - LTR41 LTR ERVL -2 793 712 185 289 13 40 chr17 9075635 9075711 -80428842 + MIR SINE MIR 109 182 -80 2073 165 36 65 chr17 9075760 9075903 -80428650 + Charlie1 DNA MER1_type 2207 2353 -408 2053 122 0 4 chr17 9075903 9076182 -80428371 + AluSg SINE Alu 1 278 -32 261 0 0 0 chr17 9076182 9076211 -80428342 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2073 165 36 65 chr17 9076211 9076586 -80427967 + Charlie1 DNA MER1_type 2351 2711 -50 185 357 12 0 chr17 9079153 9079237 -80425316 + L2 LINE L2 2898 2982 -290 2505 50 3 3 chr17 9079250 9079550 -80425003 - AluY SINE Alu -11 300 1 227 279 23 23 chr17 9080409 9080495 -80424058 + L1MC5 LINE L1 7132 7217 -744 189 0 0 0 chr17 9080711 9080732 -80423821 + (A)n Simple_repeat Simple_repeat 1 21 0 831 165 0 8 chr17 9080746 9080879 -80423674 + FLAM_C SINE Alu 1 132 -1 25 0 0 0 chr17 9081841 9081866 -80422687 + GC_rich Low_complexity Low_complexity 1 25 0 210 150 0 0 chr17 9082451 9082491 -80422062 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 24 0 0 0 chr17 9082699 9082723 -80421830 + AT_rich Low_complexity Low_complexity 1 24 0 309 151 0 0 chr17 9083364 9083417 -80421136 + (TA)n Simple_repeat Simple_repeat 1 53 0 2268 103 0 10 chr17 9083417 9083728 -80420825 - AluSc SINE Alu -1 308 1 348 98 34 28 chr17 9084552 9084661 -80419892 + L1MB8 LINE L1 5330 5440 -714 2300 105 0 0 chr17 9084665 9084961 -80419592 + AluSx SINE Alu 3 298 -14 185 0 40 0 chr17 9084991 9085016 -80419537 + (CAA)n Simple_repeat Simple_repeat 2 27 0 916 223 0 0 chr17 9085018 9085193 -80419360 + L1MB8 LINE L1 5433 5607 -577 883 116 31 0 chr17 9085236 9085365 -80419188 + AluSq/x SINE Alu 1 133 -179 315 211 157 64 chr17 9085391 9085595 -80418958 + L1MB8 LINE L1 5945 6167 -11 1955 93 12 0 chr17 9085628 9085876 -80418677 + AluSq SINE Alu 48 298 -15 1905 220 66 35 chr17 9085877 9086228 -80418325 + L1MB8 LINE L1 5599 5975 -203 2392 99 0 6 chr17 9086228 9086540 -80418013 + AluSg SINE Alu 1 310 0 1905 220 66 35 chr17 9086540 9086751 -80417802 + L1MB8 LINE L1 5975 6178 0 385 288 144 7 chr17 9086764 9086917 -80417636 + Charlie8 DNA MER1_type 104 277 -2140 2213 124 0 6 chr17 9086924 9087238 -80417315 - AluSx SINE Alu 0 312 1 1744 136 10 14 chr17 9087789 9088083 -80416470 + L1PB2 LINE L1 5858 6150 -1 2131 106 3 7 chr17 9088085 9088377 -80416176 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr17 9088377 9088399 -80416154 + AT_rich Low_complexity Low_complexity 1 22 0 293 311 44 7 chr17 9088463 9088598 -80415955 - L2 LINE L2 -13 3300 3161 2363 80 3 0 chr17 9088912 9089199 -80415354 + AluSc SINE Alu 1 288 -21 441 0 0 0 chr17 9089199 9089248 -80415305 + (TA)n Simple_repeat Simple_repeat 1 49 0 380 313 38 84 chr17 9089261 9089711 -80414842 - L2 LINE L2 -343 2971 2543 1486 168 27 40 chr17 9089982 9090310 -80414243 - MER33 DNA MER1_type 0 324 1 313 242 15 0 chr17 9090346 9090412 -80414141 + L2 LINE L2 3201 3267 -5 785 163 6 0 chr17 9090421 9090599 -80413954 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 456 213 11 6 chr17 9090641 9090815 -80413738 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 482 209 7 85 chr17 9091727 9091810 -80412743 + MIR SINE MIR 81 149 -113 1554 167 3 60 chr17 9091810 9092199 -80412354 + AluJo SINE Alu 1 372 0 482 209 7 85 chr17 9092199 9092267 -80412286 + MIR SINE MIR 149 221 -41 2418 116 31 0 chr17 9092787 9093140 -80411413 + THE1B LTR MaLR 1 364 0 566 254 21 0 chr17 9093176 9093318 -80411235 + MIR SINE MIR 63 207 -55 1885 172 6 13 chr17 9093359 9093673 -80410880 - AluJo SINE Alu 0 312 1 1755 206 78 64 chr17 9093695 9094337 -80410216 + L1MC5 LINE L1 7308 7958 -3 1341 163 107 24 chr17 9094622 9094874 -80409679 + AluJb SINE Alu 1 273 -39 2329 143 30 21 chr17 9095336 9095763 -80408790 - L1MA6 LINE L1 0 6300 5870 2358 84 0 0 chr17 9095992 9096276 -80408277 - AluSx SINE Alu -24 288 5 1825 134 4 7 chr17 9097022 9097291 -80407262 - AluSx SINE Alu -44 268 1 2894 77 55 10 chr17 9097774 9098190 -80406363 + MLT2A1 LTR ERVL 1 435 -9 272 75 0 25 chr17 9098220 9098260 -80406293 + MLT2A2 LTR ERVL 415 453 0 2228 84 13 27 chr17 9098476 9098775 -80405778 - AluY SINE Alu -16 295 1 317 243 139 35 chr17 9099045 9099218 -80405335 - MIR3 SINE MIR 0 208 18 191 300 0 33 chr17 9099243 9099303 -80405250 - L2 LINE L2 -20 3293 3236 2291 98 10 0 chr17 9099595 9099892 -80404661 + AluSp SINE Alu 1 300 -13 276 248 118 34 chr17 9099984 9100170 -80404383 + MIR SINE MIR 14 260 -2 427 240 19 0 chr17 9100868 9100972 -80403581 - MIR SINE MIR 0 262 157 787 204 127 30 chr17 9100975 9101262 -80403291 - MLT1A2 LTR MaLR 0 374 1 2145 112 10 10 chr17 9101441 9101746 -80402807 + AluSq SINE Alu 1 305 -8 222 37 0 0 chr17 9101757 9101784 -80402769 + (A)n Simple_repeat Simple_repeat 1 27 0 711 232 34 58 chr17 9102463 9102756 -80401797 + L1MC5 LINE L1 5257 5542 -2266 1491 102 0 0 chr17 9102818 9103023 -80401530 - AluSg/x SINE Alu -4 306 102 698 260 29 10 chr17 9103023 9103227 -80401326 - Zaphod DNA AcHobo -3823 208 1 3227 215 93 81 chr17 9103230 9103306 -80401247 + L1MC5 LINE L1 5846 5920 -2041 1790 166 84 0 chr17 9103306 9103626 -80400927 + MER7A DNA MER2_type 1 345 -1 3227 215 93 81 chr17 9103626 9104253 -80400300 + L1MC5 LINE L1 5920 6538 -1423 2422 73 0 0 chr17 9104253 9104554 -80399999 + AluSg SINE Alu 1 301 -9 3227 215 93 81 chr17 9104554 9105433 -80399120 + L1MC5 LINE L1 6538 7405 -556 2036 125 0 10 chr17 9105433 9105736 -80398817 + AluSx SINE Alu 1 300 -12 1905 152 0 29 chr17 9105739 9106087 -80398466 + MER44D DNA MER2_type 1 608 -1 3227 215 93 81 chr17 9106087 9106304 -80398249 + L1MC5 LINE L1 7406 7692 -269 1365 191 0 0 chr17 9106305 9106546 -80398007 - AluJb SINE Alu -14 298 58 594 147 96 6 chr17 9106556 9106712 -80397841 + L1MC5 LINE L1 7681 7850 -111 668 183 15 23 chr17 9107038 9107169 -80397384 + L2 LINE L2 3182 3311 -2 1751 234 97 21 chr17 9107242 9107692 -80396861 + MLT1H1 LTR MaLR 1 496 -59 1668 159 14 3 chr17 9107692 9107988 -80396565 + AluJo SINE Alu 1 299 -13 1751 234 97 21 chr17 9107988 9108053 -80396500 + MLT1H1 LTR MaLR 496 555 0 257 339 49 81 chr17 9108349 9108640 -80395913 + L2 LINE L2 2935 3215 -57 2216 92 0 7 chr17 9108640 9108943 -80395610 + AluY SINE Alu 1 301 -10 257 339 49 81 chr17 9108943 9108996 -80395557 + L2 LINE L2 3215 3268 -4 268 164 29 173 chr17 9109076 9109180 -80395373 + MIR SINE MIR 104 192 -70 1382 266 64 37 chr17 9109558 9110072 -80394481 - MLT1K LTR MaLR -51 537 10 527 233 52 70 chr17 9110490 9110560 -80393993 + MLT1K LTR MaLR 420 490 -98 2271 184 22 11 chr17 9110560 9111022 -80393531 + MLT1C LTR MaLR 1 467 0 527 233 52 70 chr17 9111022 9111123 -80393430 + MLT1K LTR MaLR 490 588 0 201 283 75 0 chr17 9111132 9111185 -80393368 - L2 LINE L2 -47 3225 3169 1093 98 11 6 chr17 9111479 9111653 -80392900 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 510 118 29 10 chr17 9111665 9111767 -80392786 + CT-rich Low_complexity Low_complexity 4 107 0 228 125 0 0 chr17 9111774 9111806 -80392747 + (TC)n Simple_repeat Simple_repeat 1 32 0 1828 155 3 0 chr17 9111806 9112097 -80392456 - AluJb SINE Alu -20 292 1 214 358 74 34 chr17 9112162 9112288 -80392265 + L2 LINE L2 2866 3002 -270 2018 200 40 15 chr17 9112288 9112744 -80391809 - MLT1C LTR MaLR 0 467 1 214 358 74 34 chr17 9112744 9112793 -80391760 + L2 LINE L2 3002 3048 -224 190 317 17 0 chr17 9112894 9112954 -80391599 - MIR SINE MIR -180 82 22 1625 171 13 29 chr17 9112988 9113304 -80391249 + AluJo SINE Alu 1 311 -1 515 146 21 0 chr17 9113304 9113400 -80391153 + GA-rich Low_complexity Low_complexity 2 99 0 964 305 57 9 chr17 9114449 9114767 -80389786 + MLT1I LTR MaLR 59 391 -18 592 285 28 0 chr17 9114771 9114915 -80389638 - MIR SINE MIR -102 160 13 2122 92 27 0 chr17 9115097 9115391 -80389162 + AluSg SINE Alu 1 302 -8 2265 86 0 0 chr17 9115869 9116161 -80388392 - AluSc SINE Alu -16 293 2 474 291 47 0 chr17 9116255 9116269 -80388284 - L1MA10 LINE L1 0 6334 6321 468 305 30 11 chr17 9116269 9116525 -80388028 - L1ME1 LINE L1 -5 6161 5850 2155 84 17 7 chr17 9117103 9117400 -80387153 + AluSg SINE Alu 1 300 -10 908 98 13 173 chr17 9117865 9117963 -80386590 + MER53 DNA DNA 1 45 -144 2174 98 0 0 chr17 9117963 9118249 -80386304 - AluSg SINE Alu -24 286 1 908 98 13 173 chr17 9118249 9118375 -80386178 + MER53 DNA DNA 44 189 0 3483 158 42 56 chr17 9118714 9119402 -80385151 - L1MA7 LINE L1 0 6291 5614 2241 85 13 0 chr17 9119402 9119707 -80384846 - AluSp SINE Alu -4 309 1 3483 158 42 56 chr17 9119707 9119780 -80384773 - L1MA7 LINE L1 -677 5614 5541 420 134 0 0 chr17 9120732 9120814 -80383739 - AluSc SINE Alu 0 309 228 261 0 0 0 chr17 9120833 9120862 -80383691 + (TA)n Simple_repeat Simple_repeat 1 29 0 1939 107 41 0 chr17 9120873 9121163 -80383390 + AluSx SINE Alu 1 302 -10 1324 83 12 132 chr17 9121177 9121227 -80383326 - Tigger2a DNA MER2_type -2465 253 199 668 241 80 0 chr17 9121227 9121389 -80383164 + FAM SINE Alu 1 175 0 1324 83 12 132 chr17 9121389 9121616 -80382937 - Tigger2a DNA MER2_type -2519 199 1 2050 71 45 0 chr17 9121981 9122277 -80382276 - AluY SINE Alu 0 308 1 2609 168 86 19 chr17 9122330 9122855 -80381698 + L1MB3 LINE L1 5617 6176 -7 317 273 68 30 chr17 9122908 9122943 -80381610 - MER103 DNA DNA -11 155 123 288 0 0 0 chr17 9122943 9122975 -80381578 + (CA)n Simple_repeat Simple_repeat 2 33 0 317 273 68 30 chr17 9122975 9123071 -80381482 - MER103 DNA DNA -43 123 19 323 222 26 104 chr17 9123274 9123419 -80381134 - MIR SINE MIR -62 146 30 337 340 47 20 chr17 9123712 9123862 -80380691 - MER5A DNA MER1_type -24 165 1 218 330 18 46 chr17 9123871 9123980 -80380573 - MIR3 SINE MIR -27 181 76 327 257 102 136 chr17 9124836 9125042 -80379511 + MIR SINE MIR 20 218 -44 1313 142 0 5 chr17 9125282 9125493 -80379060 - AluJb SINE Alu -19 293 84 239 95 48 0 chr17 9125526 9125568 -80378985 + T-rich Low_complexity Low_complexity 4 47 0 1465 139 13 0 chr17 9125578 9125815 -80378738 - AluSg/x SINE Alu 0 310 71 496 246 58 105 chr17 9125841 9125952 -80378601 - L1ME LINE L1 -527 5594 5479 1648 112 164 6 chr17 9125952 9126264 -80378289 - MER46B DNA MER2_type 0 236 1 2021 107 52 0 chr17 9126273 9126564 -80377989 - AluSx SINE Alu -6 306 1 496 246 58 105 chr17 9126564 9126699 -80377854 - L1ME LINE L1 -650 5471 5354 2103 117 3 0 chr17 9126699 9126999 -80377554 - AluSq SINE Alu -12 301 1 496 246 58 105 chr17 9126999 9127066 -80377487 - L1ME LINE L1 -767 5354 5285 352 292 169 51 chr17 9127099 9127335 -80377218 - L1ME LINE L1 -852 5294 5031 785 193 28 40 chr17 9127390 9127566 -80376987 - MER3 DNA MER1_type -82 127 1 453 371 42 24 chr17 9127630 9127918 -80376635 - L1ME LINE L1 -1215 4931 4639 299 323 96 76 chr17 9128092 9128383 -80376170 + L2 LINE L2 2971 3267 -5 791 220 18 26 chr17 9128835 9129028 -80375525 + MIR SINE MIR 69 257 -5 1526 122 122 7 chr17 9129028 9129298 -80375255 - AluSg SINE Alu -9 301 1 2374 50 10 0 chr17 9131319 9131619 -80372934 - AluY SINE Alu -8 303 1 4999 68 6 6 chr17 9131739 9132385 -80372168 - L1PA7 LINE L1 0 6154 5509 21 36 0 0 chr17 9132429 9132457 -80372096 + AT_rich Low_complexity Low_complexity 1 28 0 1459 144 20 78 chr17 9132457 9132763 -80371790 - AluJo SINE Alu -24 288 1 743 215 151 13 chr17 9133142 9133429 -80371124 + L1MD3 LINE L1 7238 7484 -511 2011 112 0 0 chr17 9133429 9133705 -80370848 + AluSx SINE Alu 6 281 -31 743 215 151 13 chr17 9133705 9134057 -80370496 + L1MD3 LINE L1 7484 7984 -11 1569 53 0 0 chr17 9134224 9134413 -80370140 - AluSc SINE Alu -5 304 116 1823 60 0 4 chr17 9134414 9134648 -80369905 + AluY SINE Alu 79 311 0 2213 63 18 3 chr17 9134944 9135229 -80369324 + AluY SINE Alu 1 289 -22 1996 117 7 13 chr17 9135662 9135961 -80368592 - AluSx SINE Alu -15 297 1 2021 265 11 40 chr17 9135987 9136541 -80368012 - MER115 DNA AcHobo -5 688 151 425 170 9 38 chr17 9136559 9136665 -80367888 + C-rich Low_complexity Low_complexity 5 107 0 849 142 23 20 chr17 9136780 9137136 -80367417 + C-rich Low_complexity Low_complexity 1 357 0 696 316 22 4 chr17 9137230 9137499 -80367054 - L1M4 LINE L1 -2283 3863 3590 300 285 61 79 chr17 9137527 9137741 -80366812 - L1ME4a LINE L1 -12 6109 5900 286 133 56 33 chr17 9137767 9137857 -80366696 + CT-rich Low_complexity Low_complexity 2 93 0 925 146 38 195 chr17 9137859 9137877 -80366676 - AluJb SINE Alu -1 311 292 1903 158 7 0 chr17 9137877 9138187 -80366366 - AluSx SINE Alu 0 312 1 925 146 38 195 chr17 9138187 9138537 -80366016 - AluJb SINE Alu -20 292 1 271 271 54 42 chr17 9138548 9138714 -80365839 - L1ME4a LINE L1 -1926 5882 5715 509 230 54 108 chr17 9138714 9138936 -80365617 + L2 LINE L2 3104 3313 0 359 303 45 84 chr17 9138944 9139197 -80365356 - L1ME4a LINE L1 -421 5700 5439 971 161 6 12 chr17 9139197 9139358 -80365195 + FRAM SINE Alu 4 163 -3 2000 92 4 7 chr17 9139366 9139647 -80364906 + AluSx SINE Alu 1 280 -32 359 303 45 84 chr17 9139647 9139928 -80364625 - L1ME4a LINE L1 -689 5432 5175 2523 56 0 0 chr17 9140072 9140378 -80364175 - AluY SINE Alu -5 306 1 1471 161 80 18 chr17 9140786 9141060 -80363493 - AluJb SINE Alu -10 292 2 25 0 0 0 chr17 9141207 9141232 -80363321 + AT_rich Low_complexity Low_complexity 1 25 0 530 282 29 18 chr17 9141277 9141447 -80363106 + MER5B DNA MER1_type 1 172 -6 540 264 109 33 chr17 9141481 9141849 -80362704 + L1MC5 LINE L1 7371 7766 -195 2305 81 7 0 chr17 9141850 9142158 -80362395 + AluSx SINE Alu 3 312 0 1059 123 12 0 chr17 9142158 9142320 -80362233 + AluSg/x SINE Alu 131 294 -18 293 262 92 14 chr17 9142366 9142507 -80362046 + L1MC4 LINE L1 7891 8042 0 1803 167 0 3 chr17 9143013 9143325 -80361228 + AluJb SINE Alu 1 311 -1 2398 84 6 0 chr17 9143978 9144289 -80360264 - AluSq SINE Alu 0 313 1 469 277 0 0 chr17 9144785 9144897 -80359656 + MIR SINE MIR 48 159 -103 2047 117 0 10 chr17 9145055 9145355 -80359198 + AluSx SINE Alu 3 299 -13 280 266 130 32 chr17 9145563 9145717 -80358836 + MER5B DNA MER1_type 10 178 0 206 170 21 0 chr17 9146021 9146068 -80358485 - L2 LINE L2 -1035 2279 2232 297 0 0 0 chr17 9147436 9147469 -80357084 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 289 109 57 chr17 9147683 9147894 -80356659 - L2 LINE L2 -195 3077 2856 211 256 0 0 chr17 9148021 9148060 -80356493 + (CG)n Simple_repeat Simple_repeat 1 39 0 525 257 46 20 chr17 9148805 9148981 -80355572 - MLT1F LTR MaLR -376 191 1 369 118 0 0 chr17 9148981 9149031 -80355522 + MLT1F LTR MaLR 493 542 0 2094 102 0 0 chr17 9149151 9149484 -80355069 - AluSq SINE Alu 0 333 1 373 284 9 9 chr17 9150104 9150213 -80354340 + L2 LINE L2 3200 3308 -5 423 326 182 16 chr17 9150466 9150954 -80353599 + L2 LINE L2 1616 2184 -1130 1392 129 5 0 chr17 9150972 9151181 -80353372 - AluJb SINE Alu -17 295 86 360 254 161 51 chr17 9151305 9151522 -80353031 + MLT1I LTR MaLR 122 362 -47 195 100 0 0 chr17 9151524 9151554 -80352999 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 714 272 0 0 chr17 9151554 9151727 -80352826 - L1M4 LINE L1 -2463 3683 3511 193 93 0 47 chr17 9151729 9151772 -80352781 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 413 160 29 163 chr17 9151777 9151871 -80352682 - L1MA9 LINE L1 -7 6305 6253 1178 57 0 86 chr17 9151871 9152046 -80352507 - L1PA7 LINE L1 -7 6147 5988 413 160 29 163 chr17 9152046 9152160 -80352393 - L1MA9 LINE L1 -59 6253 6125 * 2269 213 118 34 chr17 9152154 9152355 -80352198 - L1M4 LINE L1 -2614 3532 3349 4712 138 96 59 chr17 9152355 9153339 -80351214 - LTR28 LTR ERV1 0 1020 1 2269 213 118 34 chr17 9153339 9154012 -80350541 - L1M4 LINE L1 -2797 3349 2585 1181 275 119 43 chr17 9154062 9154294 -80350259 + L2 LINE L2 2236 2449 -865 2373 93 17 0 chr17 9154294 9154584 -80349969 - AluSx SINE Alu -17 295 1 1181 275 119 43 chr17 9154584 9155041 -80349512 + L2 LINE L2 2449 2977 -337 2306 99 3 0 chr17 9155090 9155382 -80349171 - AluSq SINE Alu -20 293 1 338 260 0 0 chr17 9155441 9155514 -80349039 - LTR16B LTR ERVL 0 464 392 274 351 8 15 chr17 9155520 9155651 -80348902 - LTR16B LTR ERVL -285 179 50 452 261 21 28 chr17 9156477 9156619 -80347934 + MIR SINE MIR 17 157 -105 320 125 0 0 chr17 9156681 9156729 -80347824 - MER103 DNA DNA -66 100 53 436 287 25 25 chr17 9157071 9157228 -80347325 - MIR3 SINE MIR -3 205 49 2611 53 0 0 chr17 9158021 9158321 -80346232 + AluY SINE Alu 1 300 -11 212 270 95 0 chr17 9158807 9158881 -80345672 + MIR SINE MIR 61 141 -121 2245 92 0 57 chr17 9158891 9159208 -80345345 + AluY SINE Alu 1 299 -12 309 345 31 21 chr17 9159332 9159526 -80345027 + L2 LINE L2 2667 2862 -452 2151 165 15 5 chr17 9159530 9159929 -80344624 + MER57A LTR ERV1 1 403 0 211 214 0 0 chr17 9160057 9160099 -80344454 + MIR SINE MIR 70 111 -151 831 292 154 23 chr17 9160111 9160591 -80343962 + MLT1H LTR MaLR 7 549 0 544 236 8 8 chr17 9160594 9160717 -80343836 + MIR SINE MIR 126 248 -14 225 246 82 16 chr17 9160761 9160822 -80343731 + L2 LINE L2 3188 3252 -20 2280 99 7 3 chr17 9161065 9161359 -80343194 + AluSc SINE Alu 1 295 -14 2091 104 57 0 chr17 9161525 9161804 -80342749 - AluSx SINE Alu -17 295 1 346 308 15 23 chr17 9163052 9163185 -80341368 + MIR SINE MIR 129 260 -2 653 191 0 0 chr17 9163219 9163334 -80341219 + FLAM_A SINE Alu 1 115 -18 920 244 122 70 chr17 9163640 9163755 -80340798 - L2 LINE L2 -1 3312 3204 261 0 0 0 chr17 9163755 9163784 -80340769 + (TG)n Simple_repeat Simple_repeat 1 29 0 2288 71 14 0 chr17 9163785 9164067 -80340486 - AluY SINE Alu -25 286 1 920 244 122 70 chr17 9164067 9164493 -80340060 - L2 LINE L2 -108 3205 2736 1046 229 34 38 chr17 9164605 9164898 -80339655 + MLT1A2 LTR MaLR 1 292 -82 302 279 0 0 chr17 9164923 9165002 -80339551 + L1MC4 LINE L1 7822 7900 -142 1655 179 56 24 chr17 9165031 9165406 -80339147 + MLT1B LTR MaLR 1 387 -3 1687 228 63 31 chr17 9165407 9165464 -80339089 - MLT1F1 LTR MaLR -16 551 497 2198 116 3 0 chr17 9165464 9165756 -80338797 - AluSx SINE Alu -19 293 1 1687 228 63 31 chr17 9165756 9165917 -80338636 - MLT1F1 LTR MaLR -70 497 343 1934 127 3 7 chr17 9165917 9166201 -80338352 + AluSq SINE Alu 1 283 -30 282 29 0 0 chr17 9166204 9166239 -80338314 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1687 228 63 31 chr17 9166239 9166493 -80338060 - MLT1F1 LTR MaLR -225 342 59 6022 121 32 57 chr17 9166495 9168079 -80336474 - pTR5 LTR ERV1 0 2438 743 2270 123 0 0 chr17 9168627 9168928 -80335625 - AluSx SINE Alu -11 301 1 615 200 50 14 chr17 9169071 9169211 -80335342 - MIR SINE MIR -32 230 86 594 205 53 78 chr17 9169804 9169963 -80334590 + LTR37A LTR ERV1 189 341 -85 2206 129 0 10 chr17 9169963 9170273 -80334280 - AluSx SINE Alu -4 308 2 594 205 53 78 chr17 9170273 9170357 -80334196 + LTR37A LTR ERV1 341 426 0 273 340 0 10 chr17 9170383 9170486 -80334067 + L2 LINE L2 2640 2741 -573 1740 138 15 67 chr17 9170910 9171237 -80333316 + AluJb SINE Alu 2 311 -1 330 267 141 30 chr17 9171237 9171372 -80333181 + L2 LINE L2 2741 2890 -424 256 372 35 0 chr17 9171655 9171768 -80332785 + L2 LINE L2 3134 3250 -22 2501 58 0 29 chr17 9171774 9172083 -80332470 - AluY SINE Alu -11 300 1 2588 169 40 33 chr17 9172159 9172758 -80331795 + L1MB7 LINE L1 5573 6175 -9 2530 69 0 0 chr17 9172759 9173062 -80331491 - AluY SINE Alu -8 303 1 1803 156 45 7 chr17 9173342 9173630 -80330923 - AluJo SINE Alu -13 299 1 1894 217 70 4 chr17 9173790 9174250 -80330303 + MLT1E2 LTR MaLR 137 626 0 1734 236 29 87 chr17 9176526 9177179 -80327374 + MLT2F LTR ERVL 3 617 -46 638 109 46 17 chr17 9177201 9177376 -80327177 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 401 80 100 13 chr17 9177396 9177546 -80327007 + (TCTA)n Simple_repeat Simple_repeat 3 165 0 720 89 0 0 chr17 9177546 9177647 -80326906 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 435 19 0 0 chr17 9177647 9177699 -80326854 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1006 158 27 0 chr17 9177802 9177986 -80326567 - MER5A DNA MER1_type 0 189 1 540 336 0 0 chr17 9178426 9178572 -80325981 - L3 LINE CR1 -719 858 713 312 255 69 44 chr17 9178774 9178795 -80325758 + L1M4 LINE L1 1230 1249 -5395 2105 98 46 0 chr17 9178795 9179080 -80325473 + AluSq SINE Alu 16 313 0 312 255 69 44 chr17 9179080 9179205 -80325348 + L1M4 LINE L1 1249 3695 -2949 2163 133 0 13 chr17 9179820 9180135 -80324418 - AluSx SINE Alu -1 311 1 267 213 21 117 chr17 9180577 9180671 -80323882 + MIR3 SINE MIR 88 172 -36 4707 106 13 4 chr17 9180680 9181379 -80323174 + L1PA13 LINE L1 5418 6122 -41 1201 59 0 0 chr17 9181381 9181516 -80323037 + AluY SINE Alu 1 135 -176 2768 26 3 0 chr17 9181517 9181822 -80322731 + AluY SINE Alu 1 306 -5 22 0 0 0 chr17 9181844 9181866 -80322687 + AT_rich Low_complexity Low_complexity 1 22 0 274 286 0 0 chr17 9181974 9182051 -80322502 - MIR SINE MIR -105 157 81 2320 88 7 0 chr17 9183004 9183287 -80321266 - AluSq SINE Alu -28 285 1 1780 194 53 45 chr17 9183358 9183827 -80320726 + Charlie1b DNA MER1_type 19 491 -32 636 100 0 0 chr17 9184064 9184154 -80320399 - AluS SINE Alu -222 91 2 449 180 56 0 chr17 9184155 9184244 -80320309 - MER113 DNA MER1_type? -203 318 225 722 232 73 6 chr17 9184319 9184496 -80320057 + MER5A DNA MER1_type 1 189 0 258 81 0 0 chr17 9184793 9184830 -80319723 + (TG)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr17 9184861 9184884 -80319669 + GC_rich Low_complexity Low_complexity 1 23 0 504 229 39 50 chr17 9185343 9185522 -80319031 - MER5B DNA MER1_type -1 177 1 262 319 18 98 chr17 9185564 9185727 -80318826 - L2 LINE L2 -8 3264 3115 459 209 5 53 chr17 9186409 9186596 -80317957 + GA-rich Low_complexity Low_complexity 3 180 0 560 185 105 136 chr17 9186776 9187100 -80317453 + L1MC5 LINE L1 6835 7148 -813 506 182 31 8 chr17 9187117 9187233 -80317320 - L1ME3 LINE L1 -177 5985 5883 * 708 234 99 73 chr17 9187228 9187333 -80317220 + L1MC5 LINE L1 7513 7614 -347 1764 165 0 34 chr17 9187333 9187624 -80316929 - AluJb SINE Alu -31 281 1 708 234 99 73 chr17 9187624 9187903 -80316650 + L1MC5 LINE L1 7614 7907 -54 2500 73 0 3 chr17 9187963 9188263 -80316290 - AluSg SINE Alu -11 299 1 227 282 119 30 chr17 9188611 9188813 -80315740 - L2 LINE L2 -639 2675 2456 2459 94 0 0 chr17 9189034 9189341 -80315212 - AluSq SINE Alu -6 307 1 2325 69 10 3 chr17 9189721 9190010 -80314543 + AluSq SINE Alu 15 305 -8 362 331 28 17 chr17 9190299 9190477 -80314076 + MIR SINE MIR 63 242 -20 266 293 16 8 chr17 9190598 9190721 -80313832 + (CA)n Simple_repeat Simple_repeat 2 125 0 315 348 56 28 chr17 9192186 9192364 -80312189 - MER5A DNA MER1_type 0 189 7 180 77 0 0 chr17 9192826 9192852 -80311701 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2449 87 0 0 chr17 9194872 9195181 -80309372 - AluSx SINE Alu -3 309 1 279 54 0 0 chr17 9196330 9196367 -80308186 + (TTCCC)n Simple_repeat Simple_repeat 4 40 0 333 187 47 65 chr17 9196510 9196589 -80307964 + Tigger2 DNA MER2_type 2614 2692 -26 181 0 33 33 chr17 9196589 9196619 -80307934 + (CCCCCG)n Simple_repeat Simple_repeat 4 33 0 333 187 47 65 chr17 9196619 9196646 -80307907 + Tigger2 DNA MER2_type 2692 2718 0 2375 93 3 10 chr17 9197307 9197619 -80306934 + AluSg SINE Alu 1 310 0 3308 163 38 52 chr17 9198574 9198647 -80305906 + L1MA7 LINE L1 5541 5614 -677 2403 88 13 0 chr17 9198647 9198953 -80305600 + AluSp SINE Alu 1 310 -3 3308 163 38 52 chr17 9198953 9199641 -80304912 + L1MA7 LINE L1 5614 6291 0 927 99 14 127 chr17 9199980 9200106 -80304447 - MER53 DNA DNA 0 189 95 2308 111 0 0 chr17 9200106 9200404 -80304149 + AluSg SINE Alu 1 298 -12 927 99 14 127 chr17 9200404 9200490 -80304063 - MER53 DNA DNA -94 95 1 2297 81 17 10 chr17 9200955 9201252 -80303301 - AluSg SINE Alu -11 299 1 489 298 28 18 chr17 9201814 9202087 -80302466 + L1ME1 LINE L1 5835 6161 -5 2417 86 0 0 chr17 9202195 9202487 -80302066 + AluSc SINE Alu 2 293 -16 2245 99 27 0 chr17 9202965 9203259 -80301294 - AluSg SINE Alu -8 302 1 592 285 28 0 chr17 9203441 9203585 -80300968 + MIR SINE MIR 13 160 -102 964 305 57 9 chr17 9203589 9203907 -80300646 - MLT1I LTR MaLR -18 391 59 1605 174 13 29 chr17 9204946 9205360 -80299193 - AluJo SINE Alu 0 409 1 190 317 17 0 chr17 9205394 9205454 -80299099 + MIR SINE MIR 22 82 -180 230 352 74 34 chr17 9205555 9205604 -80298949 - L2 LINE L2 -224 3048 3002 2018 200 40 15 chr17 9205604 9206060 -80298493 + MLT1C LTR MaLR 1 467 0 230 352 74 34 chr17 9206060 9206186 -80298367 - L2 LINE L2 -270 3002 2866 1828 155 3 0 chr17 9206251 9206542 -80298011 + AluJb SINE Alu 1 292 -20 228 125 0 0 chr17 9206542 9206574 -80297979 + (GA)n Simple_repeat Simple_repeat 1 32 0 474 122 31 10 chr17 9206581 9206679 -80297874 + GA-rich Low_complexity Low_complexity 4 103 0 1232 88 0 6 chr17 9206700 9206881 -80297672 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 201 283 75 0 chr17 9207175 9207228 -80297325 + L2 LINE L2 3169 3225 -47 527 233 52 70 chr17 9207237 9207338 -80297215 - MLT1K LTR MaLR 0 588 490 2271 184 22 11 chr17 9207338 9207800 -80296753 - MLT1C LTR MaLR 0 467 1 527 233 52 70 chr17 9207800 9207870 -80296683 - MLT1K LTR MaLR -98 490 420 1382 266 64 37 chr17 9208288 9208802 -80295751 + MLT1K LTR MaLR 10 537 -51 268 164 29 173 chr17 9209180 9209284 -80295269 - MIR SINE MIR -70 192 104 244 342 49 81 chr17 9209364 9209417 -80295136 - L2 LINE L2 -4 3268 3215 2216 92 0 7 chr17 9209417 9209720 -80294833 - AluY SINE Alu -10 301 1 244 342 49 81 chr17 9209720 9210011 -80294542 - L2 LINE L2 -57 3215 2935 1741 234 97 21 chr17 9210306 9210371 -80294182 - MLT1H1 LTR MaLR 0 555 496 1668 159 14 3 chr17 9210371 9210667 -80293886 - AluJo SINE Alu -13 299 1 1741 234 97 21 chr17 9210667 9211117 -80293436 - MLT1H1 LTR MaLR -59 496 1 668 183 15 23 chr17 9211190 9211321 -80293232 - L2 LINE L2 -2 3311 3182 594 147 96 6 chr17 9211647 9211803 -80292750 - L1MC5 LINE L1 -111 7850 7681 1365 191 0 0 chr17 9211813 9212054 -80292499 + AluJb SINE Alu 58 298 -14 429 190 156 83 chr17 9212055 9212260 -80292293 - L1MC5 LINE L1 -269 7692 7473 1893 155 0 29 chr17 9212272 9212620 -80291933 - MER44D DNA MER2_type -1 608 1 1232 114 5 35 chr17 9212623 9212824 -80291729 - AluSg/x SINE Alu -12 300 106 410 268 99 23 chr17 9213026 9213226 -80291327 - MIR SINE MIR -49 213 8 274 294 24 12 chr17 9213670 9213755 -80290798 - L2 LINE L2 -1 3271 3186 441 308 38 25 chr17 9213867 9214026 -80290527 + MIR SINE MIR 13 173 -89 960 96 0 15 chr17 9214730 9214865 -80289688 - FLAM_C SINE Alu 0 133 1 250 118 20 39 chr17 9216406 9216457 -80288096 - L2 LINE L2 -22 3250 3201 445 299 33 33 chr17 9216465 9216649 -80287904 + MIR3 SINE MIR 20 203 -5 2170 107 3 3 chr17 9216662 9216962 -80287591 + AluSp SINE Alu 1 300 -13 251 259 0 0 chr17 9217067 9217125 -80287428 - MIR3 SINE MIR -4 204 147 291 331 16 24 chr17 9217174 9217298 -80287255 + MARNA DNA Mariner 81 203 -383 311 317 61 43 chr17 9217437 9217601 -80286952 + HAL1b LINE L1 498 664 -684 1223 307 92 57 chr17 9217682 9218640 -80285913 + L1M4 LINE L1 4304 5294 -852 815 252 25 80 chr17 9218683 9218957 -80285596 + MIR SINE MIR 2 260 -2 4066 57 2 2 chr17 9218970 9219479 -80285074 + L1PA8 LINE L1 5660 6168 -4 265 247 26 26 chr17 9220022 9220099 -80284454 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 9220399 9220493 -80284060 + (GA)n Simple_repeat Simple_repeat 1 96 0 565 279 32 20 chr17 9220866 9221067 -80283486 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 9221748 9222340 -80282213 + (CA)n Simple_repeat Simple_repeat 1 588 0 878 302 20 24 chr17 9223200 9223455 -80281098 - MIR SINE MIR -6 256 3 2310 72 0 10 chr17 9223537 9223844 -80280709 + AluY SINE Alu 1 304 -7 1270 103 0 0 chr17 9223856 9224030 -80280523 + AluJb SINE Alu 134 307 -5 838 199 4 108 chr17 9224779 9225010 -80279543 + MIR SINE MIR 36 242 -20 1950 91 12 75 chr17 9225048 9225379 -80279174 - AluSx SINE Alu -2 310 1 373 241 0 36 chr17 9226043 9226126 -80278427 + L2 LINE L2 3185 3264 -49 261 200 20 0 chr17 9226131 9226181 -80278372 - L2 LINE L2 -38 3275 3225 251 239 45 102 chr17 9226178 9226217 -80278336 - L2 LINE L2 -248 3065 3025 * 2258 91 0 3 chr17 9226217 9226515 -80278038 - AluSc SINE Alu -12 297 1 251 239 45 102 chr17 9226515 9226563 -80277990 - L2 LINE L2 -288 3025 2983 1151 206 3 57 chr17 9226782 9226950 -80277603 + L1M4 LINE L1 2626 2773 -3373 2225 91 0 0 chr17 9226950 9227247 -80277306 - AluSx SINE Alu -15 297 1 1151 206 3 57 chr17 9227247 9227374 -80277179 + L1M4 LINE L1 2773 2905 -3241 1152 125 0 27 chr17 9228772 9228956 -80275597 + FRAM SINE Alu 1 176 0 1365 82 6 0 chr17 9229322 9229505 -80275048 - AluSp SINE Alu -129 184 1 514 158 0 0 chr17 9229505 9229674 -80274879 - L1M4 LINE L1 -1763 4383 4185 240 171 0 0 chr17 9229674 9229708 -80274845 - MLT1C LTR MaLR 0 467 434 388 118 0 0 chr17 9229708 9229759 -80274794 - Tigger5 DNA MER2_type 0 2323 2273 2240 93 0 10 chr17 9229767 9230069 -80274484 - AluSx SINE Alu -13 299 1 1622 238 36 19 chr17 9230104 9230566 -80273987 - MLT1C LTR MaLR -33 593 11 231 229 0 0 chr17 9230689 9230750 -80273803 + C-rich Low_complexity Low_complexity 5 65 0 229 339 12 24 chr17 9230760 9230925 -80273628 + L1M4 LINE L1 4497 4659 -1487 294 282 49 14 chr17 9231232 9231374 -80273179 + L1M4 LINE L1 4801 4947 -1199 1232 222 43 49 chr17 9231633 9231683 -80272870 + MLT1A1 LTR MaLR 1 50 -315 2483 106 17 0 chr17 9231683 9232032 -80272521 - THE1A LTR MaLR 0 355 1 1232 222 43 49 chr17 9232032 9232310 -80272243 + MLT1A1 LTR MaLR 50 327 -38 844 159 53 0 chr17 9232306 9232457 -80272096 + MLT1A1 LTR MaLR 207 365 0 * 289 185 96 25 chr17 9232457 9232642 -80271911 - L1MC/D LINE L1 -761 5410 5254 1743 141 7 33 chr17 9232956 9233126 -80271427 - AluJb SINE Alu -16 296 136 2057 94 0 24 chr17 9233126 9233424 -80271129 - AluSc SINE Alu -18 291 1 1743 141 7 33 chr17 9233424 9233557 -80270996 - AluJb SINE Alu -176 136 1 1717 127 0 0 chr17 9233973 9234225 -80270328 + AluSq SINE Alu 9 260 -53 207 0 0 0 chr17 9234248 9234271 -80270282 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2138 92 0 0 chr17 9234287 9234593 -80269960 + AluY SINE Alu 1 306 0 1119 155 5 0 chr17 9236668 9236868 -80267685 - AluJb SINE Alu -25 287 87 645 165 24 24 chr17 9237561 9237688 -80266865 + AluJo SINE Alu 2 128 -174 206 234 0 0 chr17 9237974 9238021 -80266532 + L2 LINE L2 3267 3313 0 1363 191 39 11 chr17 9238171 9238453 -80266100 + AluJo SINE Alu 11 300 -12 1012 163 0 0 chr17 9239931 9240097 -80264456 + AluJo SINE Alu 137 302 0 230 0 33 0 chr17 9240746 9240776 -80263777 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 791 229 0 0 chr17 9240776 9240920 -80263633 - FRAM SINE Alu -32 144 1 180 0 0 0 chr17 9241625 9241645 -80262908 + (TC)n Simple_repeat Simple_repeat 2 21 0 1724 122 0 8 chr17 9241645 9241899 -80262654 - AluSc SINE Alu -17 292 41 1413 207 7 0 chr17 9243204 9243489 -80261064 + AluJo SINE Alu 1 287 -25 545 350 66 34 chr17 9243628 9244065 -80260488 - L3 LINE CR1 -156 1421 971 998 195 0 0 chr17 9244118 9244308 -80260245 + AluJb SINE Alu 6 195 -117 277 245 21 0 chr17 9244350 9244429 -80260124 - MER5A DNA MER1_type -32 146 65 1495 175 3 7 chr17 9244673 9244959 -80259594 + AluJb SINE Alu 13 297 -15 383 340 72 30 chr17 9245026 9245261 -80259292 + L1 LINE L1 4538 4782 -1364 1509 174 57 63 chr17 9245872 9245918 -80258635 + MLT1A1 LTR MaLR 1 46 -319 2620 99 3 3 chr17 9245918 9246273 -80258280 - THE1A LTR MaLR 0 355 1 1509 174 57 63 chr17 9246273 9246593 -80257960 + MLT1A1 LTR MaLR 46 365 0 322 200 0 0 chr17 9246593 9246648 -80257905 - L1MC/D LINE L1 -2305 6001 5947 1881 145 7 0 chr17 9247085 9247381 -80257172 - AluJb SINE Alu -14 298 1 1979 129 0 7 chr17 9247793 9248087 -80256466 + AluSx SINE Alu 3 294 -18 2107 94 0 7 chr17 9248209 9248497 -80256056 - AluY SINE Alu -25 286 1 4089 153 11 25 chr17 9248633 9248755 -80255798 - L1MB2 LINE L1 -2 6169 6047 2355 73 0 3 chr17 9248755 9249058 -80255495 + AluY SINE Alu 1 302 -9 4089 153 11 25 chr17 9249058 9249682 -80254871 - L1MB2 LINE L1 -124 6047 5434 383 299 102 16 chr17 9249812 9249939 -80254614 - L2 LINE L2 -7 3306 3169 1419 191 0 47 chr17 9251178 9251508 -80253045 - AluJb SINE Alu 0 316 1 23 0 0 0 chr17 9251734 9251757 -80252796 + AT_rich Low_complexity Low_complexity 1 23 0 227 252 148 30 chr17 9252059 9252194 -80252359 - MIR3 SINE MIR -4 204 54 3947 67 12 2 chr17 9252330 9252838 -80251715 + LTR10D LTR ERV1 1 513 0 1684 162 28 99 chr17 9253047 9253441 -80251112 + MLT1A2 LTR MaLR 1 366 -8 488 322 91 91 chr17 9253652 9254265 -80250288 + L1MEd LINE L1 683 1420 -1070 822 285 142 19 chr17 9254304 9254777 -80249776 - L1MC4a LINE L1 -1661 6147 5617 417 262 88 59 chr17 9254780 9254966 -80249587 - L1MC/D LINE L1 -775 5869 5690 2639 58 0 0 chr17 9254966 9255275 -80249278 - AluY SINE Alu -2 309 1 1671 168 7 34 chr17 9255282 9255580 -80248973 - AluJb SINE Alu -22 290 1 417 262 88 59 chr17 9255580 9255725 -80248828 - L1MC/D LINE L1 -959 5685 5520 2130 118 7 3 chr17 9255730 9256027 -80248526 - AluJb SINE Alu -14 298 1 236 290 39 32 chr17 9256030 9256185 -80248368 - L1MC/D LINE L1 -1103 5541 5386 2356 114 0 3 chr17 9256487 9256793 -80247760 - AluSx SINE Alu -7 305 1 1636 110 24 12 chr17 9256814 9257069 -80247484 - L1MA2 LINE L1 0 6304 6047 287 243 0 9 chr17 9257069 9257176 -80247377 - L1MC/D LINE L1 -1641 5003 4898 510 246 130 19 chr17 9257191 9257406 -80247147 + HAL1 LINE L1 1431 1669 -838 3591 238 28 40 chr17 9257439 9258769 -80245784 - L1MC/D LINE L1 -4314 2511 1166 2438 80 0 0 chr17 9258769 9259070 -80245483 - AluY SINE Alu -10 301 1 3591 238 28 40 chr17 9259070 9259091 -80245462 - L1MC/D LINE L1 -5659 1166 1146 1494 175 46 103 chr17 9259091 9259476 -80245077 + MSTB1 LTR MaLR 1 357 -75 1798 188 0 3 chr17 9259476 9259779 -80244774 - AluJo SINE Alu -6 306 5 1494 175 46 103 chr17 9259779 9259851 -80244702 + MSTB1 LTR MaLR 357 432 0 3591 238 28 40 chr17 9259851 9260021 -80244532 - L1MC/D LINE L1 -5679 1146 880 2011 253 55 67 chr17 9260076 9260962 -80243591 - L1MC/D LINE L1 -5653 889 14 433 273 131 22 chr17 9261518 9261976 -80242577 + L1ME2 LINE L1 2113 2620 -3526 527 258 85 51 chr17 9262043 9262478 -80242075 + L1ME2 LINE L1 2750 3199 -2947 237 200 0 18 chr17 9262576 9262631 -80241922 - MLT1L LTR MaLR -205 410 357 247 171 12 110 chr17 9262753 9262835 -80241718 - MLT1L LTR MaLR -534 81 8 1208 279 98 83 chr17 9262835 9263286 -80241267 + L1ME2 LINE L1 3356 3799 -2347 2446 87 0 3 chr17 9263286 9263586 -80240967 + AluSq SINE Alu 1 299 -14 1208 279 98 83 chr17 9263586 9263775 -80240778 + L1ME2 LINE L1 3799 3984 -2162 1102 174 190 28 chr17 9263775 9264022 -80240531 + AluJo SINE Alu 2 288 -14 1208 279 98 83 chr17 9264022 9264515 -80240038 + L1ME2 LINE L1 3984 4468 -1678 2468 65 0 0 chr17 9264515 9264831 -80239722 + AluY SINE Alu 1 316 0 1208 279 98 83 chr17 9264831 9265644 -80238909 + L1ME2 LINE L1 4468 5334 -812 6501 142 42 85 chr17 9265769 9266974 -80237579 + L1MCa LINE L1 21 1162 -5264 2356 92 0 3 chr17 9266974 9267278 -80237275 + AluSg SINE Alu 1 303 -7 6501 142 42 85 chr17 9267278 9267421 -80237132 + L1MCa LINE L1 1162 1310 -5116 3187 138 7 41 chr17 9267420 9267741 -80236812 - L1M3 LINE L1 -363 5820 5531 * 1858 137 32 0 chr17 9267741 9268038 -80236515 - AluSx SINE Alu 0 306 1 3187 138 7 41 chr17 9268038 9268388 -80236165 - L1M3 LINE L1 -652 5531 5171 329 227 9 45 chr17 9270444 9270554 -80233999 - MIR3 SINE MIR -18 190 85 2665 114 62 0 chr17 9270586 9270989 -80233564 - MSTC LTR MaLR 0 428 1 2319 60 20 27 chr17 9271272 9271448 -80233105 - AluY SINE Alu -12 299 124 225 0 0 0 chr17 9271448 9271473 -80233080 + (TG)n Simple_repeat Simple_repeat 2 26 0 2319 60 20 27 chr17 9271473 9271597 -80232956 - AluY SINE Alu -187 124 1 351 258 42 42 chr17 9272062 9272182 -80232371 + MIR SINE MIR 32 151 -111 204 290 21 21 chr17 9272493 9272586 -80231967 + MIR SINE MIR 104 196 -66 448 275 22 0 chr17 9272795 9272933 -80231620 + MER103 DNA DNA 23 163 -3 2236 205 4 52 chr17 9274849 9274909 -80229644 + L1ME2 LINE L1 5382 5443 -723 1397 180 134 10 chr17 9274909 9275214 -80229339 - MER2 DNA MER2_type 0 344 2 2236 205 4 52 chr17 9275214 9275655 -80228898 + L1ME2 LINE L1 5443 5859 -307 994 211 119 144 chr17 9275665 9276394 -80228159 + MER21B LTR ERV1 9 719 -144 271 181 110 40 chr17 9276394 9276495 -80228058 + L1ME2 LINE L1 5870 5986 -180 300 127 55 0 chr17 9276554 9276609 -80227944 + L1MA10 LINE L1 6277 6334 0 2612 62 0 0 chr17 9276892 9277201 -80227352 + AluY SINE Alu 1 309 -2 22 0 0 0 chr17 9277202 9277224 -80227329 + AT_rich Low_complexity Low_complexity 1 22 0 335 41 20 0 chr17 9277362 9277411 -80227142 + (TG)n Simple_repeat Simple_repeat 2 51 0 206 288 27 41 chr17 9277427 9277500 -80227053 + L2 LINE L2 3151 3222 -50 728 241 80 44 chr17 9277925 9278174 -80226379 + MIR SINE MIR 2 259 -3 259 221 93 48 chr17 9278249 9278363 -80226190 - MER5A DNA MER1_type -14 165 39 195 256 150 25 chr17 9278408 9278550 -80226003 + MIR SINE MIR 29 189 -73 253 275 99 28 chr17 9278653 9278795 -80225758 + MLT1J LTR MaLR 5 156 -355 1820 146 11 7 chr17 9278826 9279133 -80225420 - AluJo SINE Alu 0 312 11 500 260 111 37 chr17 9279184 9279427 -80225126 + MLT1L LTR MaLR 224 560 -55 2093 101 0 28 chr17 9279496 9279830 -80224723 + AluSc SINE Alu 1 326 0 2343 87 0 0 chr17 9280434 9280720 -80223833 - AluSc SINE Alu -23 286 1 180 111 0 0 chr17 9283207 9283234 -80221319 + (CGGGGG)n Simple_repeat Simple_repeat 3 29 0 407 245 7 135 chr17 9283476 9283758 -80220795 + L2 LINE L2 2978 3223 -90 416 293 8 8 chr17 9283781 9283904 -80220649 - LTR16A LTR ERVL -264 186 64 2408 83 0 3 chr17 9284227 9284527 -80220026 + AluY SINE Alu 1 299 -12 984 104 7 14 chr17 9285839 9285983 -80218570 + FLAM_C SINE Alu 1 143 0 2270 96 13 22 chr17 9285995 9286307 -80218246 + AluSx SINE Alu 1 309 -3 764 176 21 21 chr17 9286311 9286453 -80218100 + AluJb SINE Alu 131 272 -40 201 366 42 0 chr17 9288658 9288729 -80215824 - L3b LINE CR1 0 1583 1510 * 325 217 245 35 chr17 9288715 9288858 -80215695 - MER5B DNA MER1_type -5 173 1 711 199 226 5 chr17 9289005 9289191 -80215362 + MIR SINE MIR 16 242 -20 2283 109 0 7 chr17 9289492 9289794 -80214759 + AluSx SINE Alu 1 300 -12 303 253 74 0 chr17 9291010 9291105 -80213448 + L3 LINE CR1 1342 1443 -134 299 285 21 90 chr17 9291384 9291528 -80213025 - L2 LINE L2 -219 3053 2920 646 180 9 0 chr17 9291764 9291875 -80212678 - MER81 DNA DNA 0 114 3 298 239 67 67 chr17 9292061 9292195 -80212358 - MIR SINE MIR -8 254 121 454 177 25 0 chr17 9292215 9292294 -80212259 - MER2 DNA MER2_type -264 81 1 535 224 80 0 chr17 9292296 9292421 -80212132 - MIR SINE MIR -116 146 12 202 380 107 10 chr17 9292433 9292741 -80211812 - L2 LINE L2 -957 2357 2020 2018 228 25 0 chr17 9292917 9293351 -80211202 + L1PA15-16 LINE L1 2445 2889 -3960 1224 142 0 71 chr17 9293355 9293567 -80210986 + AluJb SINE Alu 1 197 -115 1339 184 82 3 chr17 9293570 9293886 -80210667 + L1 LINE L1 2881 3221 -3628 2395 110 42 20 chr17 9293890 9294246 -80210307 - THE1B LTR MaLR 0 364 1 11908 78 25 5 chr17 9294246 9295795 -80208758 - THE1B-int LTR MaLR 0 1580 1 2357 94 50 20 chr17 9295803 9296144 -80208409 - THE1B LTR MaLR -13 351 1 8146 194 13 11 chr17 9296144 9297843 -80206710 + L1 LINE L1 3221 4922 -1927 2373 99 0 0 chr17 9298074 9298376 -80206177 - AluSg SINE Alu -8 302 1 1053 257 43 36 chr17 9298449 9298865 -80205688 + HAL1 LINE L1 1116 1534 -973 2209 90 0 0 chr17 9299100 9299379 -80205174 + AluSc SINE Alu 17 295 -14 1281 283 76 35 chr17 9299551 9299617 -80204936 + L1MEd LINE L1 330 392 -5727 186 43 0 0 chr17 9299617 9299640 -80204913 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 1281 283 76 35 chr17 9299640 9300114 -80204439 + L1MEd LINE L1 392 892 -5227 450 144 222 78 chr17 9300134 9300287 -80204266 + MER104 DNA Tc2 6 180 0 346 278 148 60 chr17 9300491 9301178 -80203375 + L1ME4a LINE L1 5330 6077 -44 2233 93 4 0 chr17 9301220 9301532 -80203021 + AluSg SINE Alu 1 313 0 207 100 0 0 chr17 9301767 9301797 -80202756 + (T)n Simple_repeat Simple_repeat 1 30 0 2199 128 0 0 chr17 9302225 9302521 -80202032 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 9303504 9303525 -80201028 + AT_rich Low_complexity Low_complexity 1 21 0 231 204 0 0 chr17 9303529 9303578 -80200975 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 228 200 18 0 chr17 9303578 9303633 -80200920 - L1MCa LINE L1 -4362 2064 2009 216 216 0 0 chr17 9303639 9303690 -80200863 + (TA)n Simple_repeat Simple_repeat 1 51 0 330 218 0 89 chr17 9303697 9303798 -80200755 + L1MC4 LINE L1 6614 6705 -1337 1379 83 10 42 chr17 9303813 9304006 -80200547 - AluSg/x SINE Alu -20 292 106 412 268 99 23 chr17 9304208 9304408 -80200145 - MIR SINE MIR -49 213 8 272 296 74 9 chr17 9304852 9304960 -80199593 - L2 LINE L2 -1 3312 3198 440 308 38 25 chr17 9305049 9305208 -80199345 + MIR SINE MIR 13 173 -89 975 96 0 15 chr17 9305911 9306046 -80198507 - FLAM_C SINE Alu 0 133 1 252 118 20 39 chr17 9307587 9307638 -80196915 - L2 LINE L2 -22 3250 3201 453 299 33 33 chr17 9307646 9307830 -80196723 + MIR3 SINE MIR 20 203 -5 2323 107 3 3 chr17 9307843 9308143 -80196410 + AluSp SINE Alu 1 300 -13 252 259 0 0 chr17 9308248 9308306 -80196247 - MIR3 SINE MIR -4 204 147 267 331 16 24 chr17 9308355 9308479 -80196074 + MARNA DNA Mariner 81 203 -383 316 317 61 43 chr17 9308618 9308782 -80195771 + HAL1b LINE L1 498 664 -684 1287 302 96 62 chr17 9308863 9309821 -80194732 + L1M4 LINE L1 4304 5294 -852 827 259 25 80 chr17 9309864 9310138 -80194415 + MIR SINE MIR 2 260 -2 4067 57 2 2 chr17 9310151 9310660 -80193893 + L1PA8 LINE L1 5660 6168 -4 266 247 26 26 chr17 9311203 9311280 -80193273 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 9311580 9311674 -80192879 + (GA)n Simple_repeat Simple_repeat 1 96 0 568 279 32 20 chr17 9312047 9312248 -80192305 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 9312929 9313521 -80191032 + (CA)n Simple_repeat Simple_repeat 1 588 0 887 302 20 24 chr17 9314381 9314636 -80189917 - MIR SINE MIR -6 256 3 2457 72 0 10 chr17 9314718 9315025 -80189528 + AluY SINE Alu 1 304 -7 1354 103 0 0 chr17 9315037 9315211 -80189342 + AluJb SINE Alu 134 307 -5 835 199 4 108 chr17 9315960 9316191 -80188362 + MIR SINE MIR 36 242 -20 2094 91 12 75 chr17 9316229 9316560 -80187993 - AluSx SINE Alu -2 310 1 374 241 0 36 chr17 9317224 9317307 -80187246 + L2 LINE L2 3185 3264 -49 257 196 22 0 chr17 9317312 9317358 -80187195 - L2 LINE L2 -38 3275 3229 717 232 20 111 chr17 9317359 9317398 -80187155 - L2 LINE L2 -248 3065 3024 2404 91 0 3 chr17 9317398 9317696 -80186857 - AluSc SINE Alu -12 297 1 717 232 20 111 chr17 9317696 9317743 -80186810 - L2 LINE L2 -289 3024 2974 2319 68 41 3 chr17 9317743 9318035 -80186518 + AluY SINE Alu 1 303 -8 717 232 20 111 chr17 9318035 9318249 -80186304 - L2 LINE L2 -339 2974 2810 1519 187 37 30 chr17 9318249 9318549 -80186004 - AluJo SINE Alu -10 302 1 717 232 20 111 chr17 9318549 9318610 -80185943 - L2 LINE L2 -503 2810 2745 2242 113 0 0 chr17 9318701 9318994 -80185559 - AluSx SINE Alu -19 293 1 231 207 184 23 chr17 9319478 9319565 -80184988 - Charlie8 DNA MER1_type -2152 265 165 184 153 0 68 chr17 9320786 9320845 -80183708 + GA-rich Low_complexity Low_complexity 2 56 0 675 212 16 22 chr17 9322131 9322315 -80182238 - MER113 DNA MER1_type? -304 217 35 2263 128 0 0 chr17 9322922 9323234 -80181319 + AluSx SINE Alu 1 312 0 375 219 27 0 chr17 9323761 9323834 -80180719 - MER113 DNA MER1_type? -5 516 442 410 167 2 98 chr17 9323874 9324549 -80180004 + (TA)n Simple_repeat Simple_repeat 1 610 0 260 57 0 0 chr17 9324557 9324592 -80179961 + MADE1 DNA Mariner 1 35 -45 2377 88 0 0 chr17 9324592 9324608 -80179945 - AluY SINE Alu -14 297 282 180 0 0 0 chr17 9324608 9324628 -80179925 + (TG)n Simple_repeat Simple_repeat 1 20 0 2377 88 0 0 chr17 9324628 9324908 -80179645 - AluY SINE Alu -28 283 1 27 0 0 0 chr17 9324956 9324983 -80179570 + AT_rich Low_complexity Low_complexity 1 27 0 226 231 0 131 chr17 9325038 9325096 -80179457 - MER113 DNA MER1_type? -402 119 86 2017 171 72 22 chr17 9325096 9325540 -80179013 + MER31B LTR ERV1 1 466 0 226 231 0 131 chr17 9325540 9325611 -80178942 - MER113 DNA MER1_type? -435 86 7 357 276 117 41 chr17 9325612 9325693 -80178860 + LTR16B LTR ERVL 1 74 -390 2501 117 57 29 chr17 9325693 9326113 -80178440 + MSTB1 LTR MaLR 1 432 0 357 276 117 41 chr17 9326113 9326428 -80178125 + LTR16B LTR ERVL 74 464 0 247 143 18 18 chr17 9327132 9327188 -80177365 + CT-rich Low_complexity Low_complexity 4 59 0 916 273 27 30 chr17 9327428 9327761 -80176792 + MER102b DNA MER1_type 10 341 0 34 24 0 0 chr17 9328441 9328482 -80176071 + AT_rich Low_complexity Low_complexity 1 41 0 5442 145 18 35 chr17 9328482 9329520 -80175033 - L1PA16 LINE L1 -6 6160 5165 2054 138 34 0 chr17 9329520 9329818 -80174735 + AluSx SINE Alu 1 308 -4 5442 145 18 35 chr17 9329818 9330545 -80174008 - L1PA16 LINE L1 -1001 5165 4427 607 207 75 27 chr17 9330612 9330800 -80173753 + MLT1J2 LTR MaLR 15 211 -239 339 257 30 0 chr17 9330832 9330933 -80173620 + MLT1J2 LTR MaLR 343 446 -4 243 225 11 90 chr17 9330947 9331036 -80173517 - MIR SINE MIR -50 212 131 2298 101 0 7 chr17 9331374 9331672 -80172881 + AluSx SINE Alu 1 296 -16 1598 174 113 10 chr17 9332224 9332535 -80172018 - MER7A DNA MER2_type -5 341 1 228 35 0 0 chr17 9332685 9332714 -80171839 + (TGGA)n Simple_repeat Simple_repeat 2 30 0 667 247 6 41 chr17 9332926 9333096 -80171457 + MIR SINE MIR 16 179 -83 674 345 26 0 chr17 9333131 9333360 -80171193 + MIR SINE MIR 23 257 -5 2261 105 16 3 chr17 9333876 9334182 -80170371 + AluSq SINE Alu 1 310 -3 851 251 21 41 chr17 9334185 9334428 -80170125 - MIR SINE MIR -10 252 15 300 323 43 18 chr17 9334824 9334988 -80169565 + L1ME LINE L1 3523 3690 -2456 180 97 0 0 chr17 9335037 9335068 -80169485 + (A)n Simple_repeat Simple_repeat 1 31 0 2362 50 4 4 chr17 9335070 9335349 -80169204 + AluY SINE Alu 1 279 -32 221 53 53 0 chr17 9335350 9335388 -80169165 + A-rich Low_complexity Low_complexity 1 40 0 272 114 0 0 chr17 9335388 9335432 -80169121 + L1MB4 LINE L1 5480 5523 -648 3746 152 3 23 chr17 9335504 9336167 -80168386 + L1MB4 LINE L1 5531 6180 0 607 275 93 55 chr17 9336264 9336312 -80168241 + L1ME LINE L1 5391 5436 -685 2350 95 0 3 chr17 9336312 9336608 -80167945 + AluSg SINE Alu 1 295 -15 607 275 93 55 chr17 9336608 9336977 -80167576 + L1ME LINE L1 5436 5824 -297 2552 293 25 49 chr17 9337009 9337062 -80167491 + L1ME1 LINE L1 4375 4428 -1738 2238 98 0 0 chr17 9337062 9337380 -80167173 + AluY SINE Alu 5 322 0 2552 293 25 49 chr17 9337380 9337536 -80167017 + L1ME1 LINE L1 4428 4586 -1580 2269 108 0 3 chr17 9337536 9337832 -80166721 + AluSc SINE Alu 1 295 -14 2552 293 25 49 chr17 9337832 9338030 -80166523 + L1ME1 LINE L1 4586 4787 -1379 1935 114 4 0 chr17 9338030 9338285 -80166268 - AluSg SINE Alu -54 256 1 2552 293 25 49 chr17 9338285 9338750 -80165803 + L1ME1 LINE L1 4787 5261 -905 2172 131 3 10 chr17 9338750 9339112 -80165441 + AluSx SINE Alu 1 312 0 2552 293 25 49 chr17 9339112 9339432 -80165121 + L1ME1 LINE L1 5261 5587 -579 892 54 0 0 chr17 9339432 9339543 -80165010 - L1PA7 LINE L1 0 6154 6044 2552 293 25 49 chr17 9339543 9339987 -80164566 + L1ME1 LINE L1 5587 5970 -196 875 187 32 41 chr17 9340008 9340158 -80164395 - L1MD2 LINE L1 0 6359 6210 2184 126 3 0 chr17 9340158 9340460 -80164093 + AluSq SINE Alu 1 303 -10 875 187 32 41 chr17 9340460 9340528 -80164025 - L1MD2 LINE L1 -149 6210 6143 814 292 101 36 chr17 9340799 9341155 -80163398 + L2 LINE L2 2934 3312 -1 200 343 15 0 chr17 9341154 9341221 -80163332 - MIR SINE MIR -97 111 44 * 1989 106 11 4 chr17 9341494 9341768 -80162785 + AluSq SINE Alu 37 312 -1 202 208 151 0 chr17 9341839 9341892 -80162661 - L2 LINE L2 -3 3269 3209 2366 69 16 7 chr17 9342148 9342453 -80162100 - AluSq SINE Alu -5 308 1 188 372 23 12 chr17 9343071 9343157 -80161396 - L2 LINE L2 -35 3237 3151 2542 174 28 58 chr17 9343287 9343823 -80160730 + MLT2B1 LTR ERVL 1 520 0 1832 137 11 85 chr17 9344003 9344264 -80160289 + MER1B DNA MER1_type 1 229 -2481 222 62 0 0 chr17 9344264 9344296 -80160257 + (CCCCAG)n Simple_repeat Simple_repeat 3 34 0 1832 137 11 85 chr17 9344296 9344398 -80160155 + MER1B DNA MER1_type 229 337 0 779 199 47 31 chr17 9344432 9344623 -80159930 + Charlie8 DNA MER1_type 54 247 -2170 2298 85 51 0 chr17 9344756 9345051 -80159502 + AluSg SINE Alu 1 310 0 2088 207 0 0 chr17 9345231 9345608 -80158945 + MER44D DNA MER2_type 1 377 -328 228 278 0 0 chr17 9345595 9345649 -80158904 - MER44D DNA MER2_type -41 564 639 * 2119 148 16 11 chr17 9345648 9346014 -80158539 + MER44D DNA MER2_type 364 603 -2 506 266 35 35 chr17 9346023 9346166 -80158387 + L2 LINE L2 3171 3313 0 770 218 92 187 chr17 9346768 9347066 -80157487 - L2 LINE L2 -1 3312 2987 1564 163 23 10 chr17 9347066 9347367 -80157186 - L1MA7 LINE L1 0 6291 5987 770 218 92 187 chr17 9347367 9347383 -80157170 - L2 LINE L2 -326 2987 2971 2376 59 3 10 chr17 9347383 9347673 -80156880 - AluSc SINE Alu -21 288 1 770 218 92 187 chr17 9347673 9347876 -80156677 - L2 LINE L2 -342 2971 2843 1602 224 120 21 chr17 9347876 9348310 -80156243 + LTR40a LTR ERVL 1 477 -42 2518 69 0 3 chr17 9348369 9348675 -80155878 - AluSc SINE Alu -4 305 1 516 222 32 16 chr17 9349949 9350075 -80154478 + MIR SINE MIR 90 217 -45 2090 107 7 17 chr17 9350094 9350393 -80154160 + AluY SINE Alu 1 296 -15 439 266 59 42 chr17 9350850 9351038 -80153515 + MIR SINE MIR 18 204 -58 605 301 201 32 chr17 9351748 9352306 -80152247 + L2 LINE L2 2250 2901 -413 526 162 46 104 chr17 9352741 9352914 -80151639 + MLT1K LTR MaLR 417 579 -9 204 376 55 28 chr17 9353093 9353202 -80151351 + L2 LINE L2 3096 3207 -65 304 226 0 16 chr17 9355152 9355214 -80149339 + MER5A DNA MER1_type 1 61 -128 2300 123 0 0 chr17 9355489 9355799 -80148754 + AluSx SINE Alu 1 310 -2 330 169 0 0 chr17 9356619 9356684 -80147869 + (CA)n Simple_repeat Simple_repeat 1 65 0 346 237 25 39 chr17 9356705 9356854 -80147699 + MIR3 SINE MIR 37 185 -23 909 207 57 37 chr17 9357351 9357597 -80146956 + MIR SINE MIR 2 252 -10 506 60 5 2 chr17 9358463 9358534 -80146019 - LTR6B LTR ERV1 0 558 492 4164 35 8 4 chr17 9358735 9359256 -80145297 - LTR6B LTR ERV1 -35 523 1 1870 94 0 12 chr17 9360177 9360422 -80144131 + AluSx SINE Alu 3 244 -68 516 203 23 170 chr17 9360422 9360939 -80143614 - L1MCa LINE L1 -3486 2940 2500 2444 60 0 0 chr17 9360943 9361249 -80143304 - AluY SINE Alu 0 306 1 266 225 59 70 chr17 9361305 9361492 -80143061 - L1MCa LINE L1 -4801 1625 1441 285 29 0 0 chr17 9361501 9361535 -80143018 + (TG)n Simple_repeat Simple_repeat 2 35 0 720 198 198 12 chr17 9361544 9361797 -80142756 - L1MD3 LINE L1 -170 7825 7526 231 317 108 36 chr17 9363593 9363760 -80140793 - MIR SINE MIR -7 255 77 254 231 0 19 chr17 9363919 9363971 -80140582 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 222 236 0 0 chr17 9365363 9365418 -80139135 + (CA)n Simple_repeat Simple_repeat 1 55 0 927 307 95 58 chr17 9366099 9366922 -80137631 + L2 LINE L2 1893 2776 -496 2201 118 3 3 chr17 9366922 9367228 -80137325 + AluSg SINE Alu 1 306 -4 927 307 95 58 chr17 9367228 9367723 -80136830 + L2 LINE L2 2776 3251 -21 187 298 88 51 chr17 9367794 9368009 -80136544 + L2 LINE L2 3084 3306 -7 2058 115 0 28 chr17 9371368 9371714 -80132839 + AluSx SINE Alu 5 342 0 267 79 0 0 chr17 9372442 9372480 -80132073 + (TCC)n Simple_repeat Simple_repeat 2 39 0 232 341 92 12 chr17 9372903 9373067 -80131486 - MIR3 SINE MIR -23 185 9 292 261 72 0 chr17 9373082 9373193 -80131360 + MIR SINE MIR 68 186 -76 474 279 60 71 chr17 9373194 9373575 -80130978 + MLT1J LTR MaLR 1 417 -94 181 281 18 79 chr17 9374023 9374137 -80130416 - MIR SINE MIR -83 125 19 2404 74 0 29 chr17 9375245 9375557 -80128996 - AluY SINE Alu -8 303 1 245 322 83 17 chr17 9375562 9375742 -80128811 - L1MC5 LINE L1 -48 7913 7722 416 224 140 9 chr17 9376108 9376215 -80128338 + MIR SINE MIR 106 226 -36 322 287 155 0 chr17 9376568 9376697 -80127856 - MER112 DNA MER1_type -7 253 105 297 0 0 0 chr17 9376700 9376733 -80127820 + (TG)n Simple_repeat Simple_repeat 2 34 0 241 233 33 0 chr17 9376737 9376797 -80127756 - MER112 DNA MER1_type -198 62 1 434 246 49 8 chr17 9376827 9376949 -80127604 + MIR SINE MIR 20 146 -116 373 216 182 57 chr17 9377639 9377815 -80126738 + MIR3 SINE MIR 3 200 -8 248 261 171 9 chr17 9381238 9381349 -80123204 + MLT1J LTR MaLR 1 129 -382 692 287 52 45 chr17 9381374 9381559 -80122994 + MLT1J LTR MaLR 239 428 -83 341 58 19 0 chr17 9381559 9381611 -80122942 + (TG)n Simple_repeat Simple_repeat 2 54 0 692 287 52 45 chr17 9381611 9381693 -80122860 + MLT1J LTR MaLR 428 508 -3 452 232 45 0 chr17 9382142 9382285 -80122268 + MIR SINE MIR 42 192 -63 276 228 127 0 chr17 9382365 9382444 -80122109 - MIR SINE MIR -109 153 65 475 297 51 11 chr17 9383106 9383281 -80121272 - MIR SINE MIR -75 187 6 2478 82 0 0 chr17 9383399 9383691 -80120862 + AluSg SINE Alu 1 292 -18 798 248 112 61 chr17 9383691 9384066 -80120487 + LTR37B LTR ERV1 66 459 -9 456 284 84 38 chr17 9385317 9385637 -80118916 - L1ME4a LINE L1 -194 5927 5593 323 221 49 57 chr17 9385656 9385778 -80118775 - L1ME4a LINE L1 -616 5505 5385 1021 347 71 56 chr17 9385809 9385890 -80118663 - L1ME4a LINE L1 -816 5330 5252 2374 96 7 0 chr17 9385890 9386193 -80118360 - AluSc SINE Alu -4 305 1 1021 347 71 56 chr17 9386193 9386469 -80118084 - L1ME4a LINE L1 -894 5252 4982 2317 94 3 28 chr17 9386469 9386788 -80117765 - AluSq SINE Alu -2 311 1 1021 347 71 56 chr17 9386788 9387415 -80117138 - L1ME4a LINE L1 -1164 4982 4330 232 217 11 43 chr17 9387681 9387773 -80116780 - L1ME4a LINE L1 -2182 3964 3876 268 298 10 19 chr17 9388841 9388945 -80115608 - MARNA DNA Mariner -153 433 331 495 338 87 10 chr17 9388969 9389268 -80115285 - MARNA DNA Mariner -175 411 90 2217 38 7 7 chr17 9389735 9390024 -80114529 - L1PA8 LINE L1 0 6172 5884 374 330 58 17 chr17 9390098 9390271 -80114282 - L1M4 LINE L1 -847 5299 5120 1421 129 0 0 chr17 9390351 9390537 -80114016 + AluSx SINE Alu 3 188 -124 381 262 74 125 chr17 9390722 9390775 -80113778 - L1ME LINE L1 -297 5824 5770 2241 102 0 33 chr17 9390775 9391079 -80113474 - AluSc SINE Alu -14 295 2 381 262 74 125 chr17 9391079 9391407 -80113146 - L1ME LINE L1 -351 5770 5473 1929 146 11 4 chr17 9391407 9391687 -80112866 - AluJo SINE Alu -30 282 1 381 262 74 125 chr17 9391687 9391816 -80112737 - L1ME LINE L1 -648 5473 5339 441 0 0 0 chr17 9392280 9392329 -80112224 + (CA)n Simple_repeat Simple_repeat 2 50 0 2452 72 3 0 chr17 9393052 9393342 -80111211 - AluSc SINE Alu -18 291 1 628 252 21 7 chr17 9393942 9394085 -80110468 + MER69 DNA AcHobo 3 147 -1079 228 203 14 54 chr17 9394079 9394153 -80110400 + MER69 DNA AcHobo 2447 2517 -9 * 466 273 61 69 chr17 9394169 9394400 -80110153 - MIR SINE MIR -6 256 28 * 561 204 102 7 chr17 9394396 9394543 -80110010 - L2 LINE L2 -257 3056 2896 607 304 22 6 chr17 9396066 9396247 -80108306 + MIR SINE MIR 7 190 -72 355 346 86 40 chr17 9396726 9397053 -80107500 - L2 LINE L2 -20 3252 2911 2247 113 0 16 chr17 9397180 9397491 -80107062 + AluSx SINE Alu 1 306 -6 308 264 22 11 chr17 9397950 9398041 -80106512 - MIR3 SINE MIR -27 181 90 488 190 10 10 chr17 9398685 9398785 -80105768 - MIR SINE MIR -124 138 39 2144 87 36 4 chr17 9398913 9399190 -80105363 + AluSx SINE Alu 18 303 -9 23 0 0 0 chr17 9400228 9400251 -80104302 + GC_rich Low_complexity Low_complexity 1 23 0 6330 193 31 85 chr17 9400879 9401339 -80103214 + L1MC4a LINE L1 5981 6464 -1344 2351 121 0 0 chr17 9401339 9401646 -80102907 + AluSx SINE Alu 1 307 -5 6330 193 31 85 chr17 9401646 9403052 -80101501 + L1MC4a LINE L1 6464 7746 -62 224 122 24 0 chr17 9403586 9403627 -80100926 + CT-rich Low_complexity Low_complexity 2 43 0 2317 98 23 0 chr17 9403634 9403939 -80100614 - AluSx SINE Alu 0 312 1 427 244 15 46 chr17 9404111 9404242 -80100311 - MIR3 SINE MIR -29 179 53 497 308 49 80 chr17 9404353 9404584 -80099969 - HAL1b LINE L1 -542 806 821 2493 93 3 0 chr17 9404584 9404896 -80099657 - AluSq SINE Alu 0 313 1 497 308 49 80 chr17 9404896 9405245 -80099308 - HAL1b LINE L1 -526 822 464 437 290 158 22 chr17 9405240 9405512 -80099041 + L1M4 LINE L1 4231 4539 -1607 * 1329 182 48 9 chr17 9405514 9405849 -80098704 + L1M4 LINE L1 4969 5316 -830 375 182 0 0 chr17 9405883 9405960 -80098593 + GA-rich Low_complexity Low_complexity 2 78 0 198 238 0 0 chr17 9405963 9406005 -80098548 - L2 LINE L2 -21 3251 3210 244 97 0 0 chr17 9406059 9406090 -80098463 - THE1-int LTR MaLR -999 581 551 202 330 95 67 chr17 9406100 9406279 -80098274 - MIR SINE MIR -59 203 20 277 320 132 10 chr17 9406821 9407018 -80097535 - MIR SINE MIR -8 254 34 609 210 101 0 chr17 9407088 9407226 -80097327 - MIR SINE MIR 0 262 111 381 93 0 0 chr17 9407619 9407673 -80096880 + (TCCCC)n Simple_repeat Simple_repeat 1 54 0 467 155 0 0 chr17 9407673 9407744 -80096809 - AluJ/FRAM SINE Alu -25 287 217 359 100 33 0 chr17 9407782 9407842 -80096711 + C-rich Low_complexity Low_complexity 1 62 0 1829 138 3 3 chr17 9407842 9408124 -80096429 - AluJb SINE Alu -20 292 11 950 73 46 5 chr17 9408768 9409324 -80095229 + (TAGA)n Simple_repeat Simple_repeat 1 578 0 548 261 234 3 chr17 9409581 9410077 -80094476 - L2 LINE L2 -899 2415 1757 2401 113 8 8 chr17 9410171 9410525 -80094028 - THE1A LTR MaLR -1 354 1 33 43 0 0 chr17 9410587 9410634 -80093919 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr17 9410665 9410689 -80093864 + AT_rich Low_complexity Low_complexity 1 24 0 3493 196 83 11 chr17 9410693 9411439 -80093114 + L1MDa LINE L1 -296 503 -5712 1843 178 52 42 chr17 9411462 9411871 -80092682 + MSTB1 LTR MaLR 17 360 -4 343 155 0 124 chr17 9411918 9412015 -80092538 + L1MDa LINE L1 1182 1266 -4949 3936 218 28 38 chr17 9412059 9413360 -80091193 + L1MDa LINE L1 1219 2580 -3635 2143 159 0 3 chr17 9413360 9413725 -80090828 + L1PB3 LINE L1 5790 6153 -1 3936 218 28 38 chr17 9413725 9414239 -80090314 + L1MDa LINE L1 2580 3098 -3117 3481 166 8 13 chr17 9414239 9414876 -80089677 + L1MD1 LINE L1 5609 6242 0 517 356 18 12 chr17 9415088 9415417 -80089136 + L1MDa LINE L1 54 384 -6012 1557 252 65 76 chr17 9415636 9415989 -80088564 + L1MDa LINE L1 658 1013 -5383 2209 103 0 3 chr17 9415989 9416289 -80088264 - AluSx SINE Alu -13 299 1 1557 252 65 76 chr17 9416289 9416926 -80087627 + L1MDa LINE L1 1013 1637 -4759 365 210 84 8 chr17 9416928 9417047 -80087506 + L1ME2 LINE L1 6018 6145 -19 181 233 0 23 chr17 9417048 9417091 -80087462 + L3b LINE CR1 1129 1170 -413 343 256 67 0 chr17 9417111 9417201 -80087352 + L1MDa LINE L1 1617 1712 -4684 3593 227 58 61 chr17 9417213 9418475 -80086078 + L1MDa LINE L1 3615 4872 -1343 2362 67 0 0 chr17 9419527 9419825 -80084728 + AluY SINE Alu 1 298 -13 2880 142 39 26 chr17 9419853 9420397 -80084156 - L1MC2 LINE L1 -14 6330 5780 5175 227 42 28 chr17 9420418 9421589 -80082964 - L1M4 LINE L1 -1396 4750 3554 2033 101 0 4 chr17 9421589 9421865 -80082688 - AluSq SINE Alu -38 275 1 5175 227 42 28 chr17 9421865 9422127 -80082426 - L1M4 LINE L1 -2592 3554 3297 2037 184 13 0 chr17 9422127 9422512 -80082041 - L1MB7 LINE L1 -16 6168 5779 336 281 58 16 chr17 9422871 9422992 -80081561 - MIR SINE MIR -109 153 28 1932 209 53 9 chr17 9423044 9423493 -80081060 - Charlie4a DNA MER1_type -1 507 39 182 250 50 0 chr17 9424033 9424073 -80080480 + MIR SINE MIR 108 149 -59 2180 110 7 0 chr17 9424305 9424615 -80079938 - AluSq SINE Alu -1 312 1 2496 52 0 3 chr17 9426351 9426660 -80077893 - AluY SINE Alu -3 308 1 240 35 0 0 chr17 9426715 9426744 -80077809 + (CA)n Simple_repeat Simple_repeat 1 29 0 1747 136 0 79 chr17 9426819 9427149 -80077404 - AluJo SINE Alu -8 304 1 2202 97 0 7 chr17 9427245 9427553 -80077000 + AluSg SINE Alu 1 306 -4 3048 104 15 75 chr17 9427642 9428172 -80076381 - L1PA14 LINE L1 0 6161 5664 232 338 0 0 chr17 9428244 9428318 -80076235 + MIR3 SINE MIR 130 203 -5 1478 214 32 25 chr17 9429404 9429941 -80074612 + MLT1G LTR MaLR 7 590 0 196 300 0 0 chr17 9430255 9430305 -80074248 - L3 LINE CR1 -5 1572 1523 418 234 184 58 chr17 9430500 9430761 -80073792 + L2 LINE L2 2920 3213 -100 2451 71 0 0 chr17 9431516 9431826 -80072727 + AluY SINE Alu 1 310 -1 292 221 26 39 chr17 9432078 9432155 -80072398 - L2 LINE L2 -1 3312 3237 1067 267 81 21 chr17 9432212 9432646 -80071907 + L1ME LINE L1 5284 5743 -427 230 410 37 4 chr17 9432830 9433103 -80071450 - L2 LINE L2 -384 2930 2649 484 296 182 76 chr17 9433180 9433269 -80071284 + L3 LINE CR1 62 140 -1437 203 32 65 0 chr17 9433269 9433300 -80071253 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 484 296 182 76 chr17 9433300 9433353 -80071200 + L3 LINE CR1 140 186 -1391 2126 94 52 10 chr17 9433353 9433662 -80070891 + L1PB1 LINE L1 5828 6149 -2 484 296 182 76 chr17 9433662 9434034 -80070519 + L3 LINE CR1 186 632 -945 227 176 0 0 chr17 9434042 9434093 -80070460 - L1MB3 LINE L1 -6 6177 6127 * 5417 126 14 5 chr17 9434088 9435009 -80069544 - L1PA16 LINE L1 0 6166 5202 2524 141 15 0 chr17 9435030 9435435 -80069118 - L1MB3 LINE L1 -50 6133 5723 1665 259 57 136 chr17 9435549 9435992 -80068561 + MLT1J LTR MaLR 1 473 -38 273 119 0 0 chr17 9437813 9437855 -80066698 + (A)n Simple_repeat Simple_repeat 1 42 0 2220 106 0 3 chr17 9438409 9438712 -80065841 + AluSq SINE Alu 2 303 -10 277 224 102 31 chr17 9439014 9439112 -80065441 - L2 LINE L2 -2 3311 3207 1689 133 0 22 chr17 9439668 9439938 -80064615 + AluJb SINE Alu 42 305 -7 696 319 99 28 chr17 9440986 9441381 -80063172 - L3 LINE CR1 -113 1464 1042 451 303 50 48 chr17 9441666 9441787 -80062766 + L1M4 LINE L1 3610 3729 -2417 1705 98 117 0 chr17 9441787 9442052 -80062501 + AluSq SINE Alu 5 300 -13 451 303 50 48 chr17 9442052 9442309 -80062244 + L1M4 LINE L1 3729 3989 -2157 2254 99 3 0 chr17 9442500 9442812 -80061741 - AluSp SINE Alu 0 313 1 198 0 0 0 chr17 9443174 9443196 -80061357 + (TG)n Simple_repeat Simple_repeat 1 22 0 645 326 47 47 chr17 9444030 9444309 -80060244 + L2 LINE L2 2994 3272 0 295 281 7 89 chr17 9444308 9444454 -80060099 - MIR3 SINE MIR -14 194 61 * 293 286 40 16 chr17 9444862 9444988 -80059565 - L2 LINE L2 -219 3053 2925 2120 108 0 9 chr17 9445108 9445424 -80059129 + AluSq SINE Alu 1 313 0 508 224 303 0 chr17 9445844 9446009 -80058544 + MIR SINE MIR 15 229 -33 681 166 0 126 chr17 9446349 9446548 -80058005 - MER104 DNA MER2_type -3 177 4 847 180 58 17 chr17 9446732 9446904 -80057649 - FRAM SINE Alu -4 172 1 827 163 0 0 chr17 9447282 9447429 -80057124 - FRAM SINE Alu -1 175 29 252 272 120 68 chr17 9447792 9447864 -80056689 - MIR SINE MIR -7 255 188 1795 153 3 3 chr17 9447864 9448167 -80056386 + AluJo SINE Alu 1 303 0 252 272 120 68 chr17 9448167 9448303 -80056250 - MIR SINE MIR -74 188 26 261 0 0 0 chr17 9448757 9448786 -80055767 + (CA)n Simple_repeat Simple_repeat 1 29 0 2454 49 10 0 chr17 9449921 9450226 -80054327 - AluSc SINE Alu -1 308 1 215 268 18 0 chr17 9450577 9450633 -80053920 + MIR SINE MIR 96 152 -110 495 267 294 19 chr17 9451688 9452223 -80052330 + L2 LINE L2 1753 2434 -880 4095 194 29 18 chr17 9452244 9453141 -80051412 + L1ME3 LINE L1 5254 6160 -2 476 115 90 0 chr17 9453173 9453251 -80051302 - FRAM SINE Alu -46 130 46 414 0 0 0 chr17 9453264 9453310 -80051243 + (TTA)n Simple_repeat Simple_repeat 1 46 0 771 187 0 0 chr17 9453311 9453434 -80051119 - FLAM_C SINE Alu -20 123 1 316 262 50 64 chr17 9453969 9454110 -80050443 + HAL1 LINE L1 1167 1305 -1202 258 244 79 43 chr17 9454154 9454318 -80050235 + L1M4 LINE L1 3422 3591 -2555 1792 172 28 53 chr17 9454334 9454771 -80049782 + L1MC4a LINE L1 5902 6327 -1481 2496 123 31 39 chr17 9454779 9454959 -80049594 + MSTA LTR MaLR 17 197 -231 2136 110 0 0 chr17 9454959 9455251 -80049302 + AluSc SINE Alu 1 292 -17 2496 123 31 39 chr17 9455251 9455485 -80049068 + MSTA LTR MaLR 197 428 0 192 40 0 0 chr17 9455498 9455523 -80049030 + (A)n Simple_repeat Simple_repeat 1 25 0 2181 190 45 52 chr17 9455566 9456361 -80048192 + L1MC4a LINE L1 6366 7165 -643 2230 95 7 0 chr17 9456361 9456655 -80047898 + AluSx SINE Alu 1 296 -16 2181 190 45 52 chr17 9456655 9456703 -80047850 + L1MC4a LINE L1 7165 7212 -596 1901 146 26 61 chr17 9456703 9456865 -80047688 + MLT1A1 LTR MaLR 1 167 -198 2282 98 3 7 chr17 9456865 9457161 -80047392 + AluSc SINE Alu 1 295 -14 1901 146 26 61 chr17 9457161 9457376 -80047177 + MLT1A1 LTR MaLR 167 365 0 2181 190 45 52 chr17 9457376 9457413 -80047140 + L1MC4a LINE L1 7212 7248 -560 2265 110 0 0 chr17 9457413 9457705 -80046848 - AluSx SINE Alu -19 293 2 2181 190 45 52 chr17 9457705 9457916 -80046637 + L1MC4a LINE L1 7248 7459 -349 1401 163 71 44 chr17 9457916 9458210 -80046343 + AluJo SINE Alu 1 302 0 2181 190 45 52 chr17 9458210 9458566 -80045987 + L1MC4a LINE L1 7459 7808 0 313 216 157 147 chr17 9458609 9458722 -80045831 + L1M4 LINE L1 3615 3733 -2413 2212 105 3 3 chr17 9458722 9459054 -80045499 + AluSq SINE Alu 1 332 0 313 216 157 147 chr17 9459054 9459143 -80045410 + L1M4 LINE L1 3733 3820 -2326 1514 249 77 56 chr17 9459817 9460497 -80044056 - Charlie8 DNA MER1_type -1723 694 1 316 314 131 48 chr17 9460625 9461100 -80043453 + L1M4 LINE L1 3851 4364 -1782 4123 168 29 50 chr17 9461112 9461358 -80043195 + L1MB8 LINE L1 4905 5155 -1023 2237 121 3 13 chr17 9461358 9461672 -80042881 + AluSx SINE Alu 1 311 -1 4123 168 29 50 chr17 9461672 9462386 -80042167 + L1MB8 LINE L1 5155 5882 -296 2583 63 0 0 chr17 9462386 9462685 -80041868 + AluY SINE Alu 1 299 -12 4123 168 29 50 chr17 9462685 9462755 -80041798 + L1MB8 LINE L1 5882 5952 -226 2340 90 16 19 chr17 9462755 9463066 -80041487 + AluSg SINE Alu 1 310 0 4123 168 29 50 chr17 9463066 9463336 -80041217 + L1MB8 LINE L1 5952 6177 -1 658 298 70 66 chr17 9463362 9463802 -80040751 + L1M4 LINE L1 4487 4928 -1218 660 91 0 0 chr17 9463861 9463949 -80040604 - AluSg/x SINE Alu -5 304 217 460 258 91 67 chr17 9463978 9464255 -80040298 + L1ME3A LINE L1 2227 2546 -3948 2423 87 6 6 chr17 9464284 9464595 -80039958 - AluSx SINE Alu -1 311 1 1190 283 212 39 chr17 9464602 9464940 -80039613 + L1ME3A LINE L1 2508 2786 -3640 1975 145 20 3 chr17 9464940 9465243 -80039310 + AluSx SINE Alu 1 308 -4 1190 283 212 39 chr17 9465243 9465546 -80039007 + L1ME3A LINE L1 2786 3035 -3391 1107 149 0 12 chr17 9465546 9465714 -80038839 + FAM SINE Alu 1 166 -9 1190 283 212 39 chr17 9465714 9465886 -80038667 + L1ME3A LINE L1 3035 3176 -3250 2292 104 7 3 chr17 9465886 9466184 -80038369 + AluSx SINE Alu 1 299 -13 1190 283 212 39 chr17 9466184 9466915 -80037638 + L1ME3A LINE L1 3176 4321 -2105 2090 93 11 4 chr17 9466943 9467247 -80037306 - AluSg SINE Alu 0 306 1 1431 173 73 6 chr17 9467275 9467588 -80036965 + L1MB8 LINE L1 5839 6172 -6 422 306 46 0 chr17 9467666 9467862 -80036691 + L1ME3A LINE L1 4348 4552 -1874 2144 124 0 0 chr17 9467862 9468144 -80036409 + AluSq SINE Alu 1 282 -31 749 0 33 0 chr17 9468146 9468237 -80036316 + (GGAAA)n Simple_repeat Simple_repeat 4 97 0 214 182 30 0 chr17 9468243 9468309 -80036244 + GA-rich Low_complexity Low_complexity 1 68 0 229 266 133 8 chr17 9468479 9468607 -80035946 + L1ME3A LINE L1 4730 4873 -1553 4039 191 125 47 chr17 9468623 9469786 -80034767 + L1M4 LINE L1 14 1266 -5276 893 118 141 0 chr17 9469913 9470048 -80034505 + AluJb SINE Alu 137 290 -22 288 287 33 39 chr17 9470155 9470336 -80034217 + L1ME3A LINE L1 5105 5284 -1142 1174 255 20 3 chr17 9470356 9470709 -80033844 - L1M4 LINE L1 -2173 3973 3615 833 138 0 0 chr17 9470709 9470825 -80033728 + FLAM_C SINE Alu 1 116 -27 482 243 14 28 chr17 9470846 9470990 -80033563 - L1M4 LINE L1 -2522 3624 3483 * 2660 233 69 37 chr17 9470986 9471344 -80033209 - L1ME1 LINE L1 -5 6161 5816 1879 148 3 20 chr17 9471344 9471648 -80032905 + AluJo SINE Alu 1 299 -13 2660 233 69 37 chr17 9471648 9472100 -80032453 - L1ME1 LINE L1 -350 5816 5325 2854 75 3 24 chr17 9472330 9472702 -80031851 + THE1B LTR MaLR 1 364 0 340 211 16 12 chr17 9472778 9472858 -80031695 + L1ME3A LINE L1 5259 5340 -1086 2084 106 4 0 chr17 9472858 9473123 -80031430 + AluSp SINE Alu 1 266 -47 2556 61 0 3 chr17 9473162 9473472 -80031081 + AluY SINE Alu 1 309 -2 363 264 67 1 chr17 9473474 9473693 -80030860 + L1ME3A LINE L1 5482 5716 -728 375 319 94 47 chr17 9473693 9473884 -80030669 + L1ME3A LINE L1 6244 6443 -7 2348 104 0 3 chr17 9473918 9474227 -80030326 + AluSg SINE Alu 1 308 -2 1966 198 8 45 chr17 9474645 9474719 -80029834 - Charlie4a DNA MER1_type -1456 505 430 200 35 35 0 chr17 9474719 9474748 -80029805 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2234 46 0 4 chr17 9474748 9475009 -80029544 - AluY SINE Alu -51 260 1 1966 198 8 45 chr17 9475009 9475418 -80029135 - Charlie4a DNA MER1_type -1529 432 39 1940 103 72 0 chr17 9476261 9476697 -80027856 + AluSx SINE Alu 1 455 0 1972 128 28 14 chr17 9476708 9476996 -80027557 + AluSc SINE Alu 1 292 -17 751 272 25 20 chr17 9476996 9477198 -80027355 + MIR SINE MIR 60 262 0 1053 202 5 10 chr17 9477353 9477561 -80026992 + AluJo SINE Alu 85 291 -21 2276 122 0 7 chr17 9477747 9478050 -80026503 + AluSq SINE Alu 1 301 -12 2398 167 95 6 chr17 9478050 9478553 -80026000 - MER74A LTR ERVL -10 548 1 800 248 25 95 chr17 9478653 9478927 -80025626 + MIR SINE MIR 7 261 -1 684 306 40 99 chr17 9478923 9479328 -80025225 + L2 LINE L2 2891 3271 -1 * 969 243 78 51 chr17 9480326 9480871 -80023682 + MER20B DNA MER1_type 2 531 -252 2184 132 0 7 chr17 9480871 9481181 -80023372 - AluSx SINE Alu -4 308 1 969 243 78 51 chr17 9481181 9481286 -80023267 + MER20B DNA MER1_type 531 632 -151 2394 93 3 0 chr17 9481286 9481596 -80022957 - AluSx SINE Alu -1 311 1 969 243 78 51 chr17 9481596 9481631 -80022922 + MER20B DNA MER1_type 632 752 -31 462 261 171 25 chr17 9482043 9482242 -80022311 - MIR SINE MIR -27 235 8 986 190 6 0 chr17 9482242 9482416 -80022137 + AluJb SINE Alu 133 307 -5 2406 85 3 0 chr17 9482563 9482857 -80021696 + AluSp SINE Alu 7 301 -12 293 320 50 30 chr17 9483019 9483119 -80021434 + L2 LINE L2 3197 3298 -15 3902 142 24 39 chr17 9483128 9483401 -80021152 - L1MB8 LINE L1 -5 6173 5898 2309 104 0 3 chr17 9483401 9483709 -80020844 - AluSc SINE Alu -2 307 1 3902 142 24 39 chr17 9483709 9484188 -80020365 - L1MB8 LINE L1 -280 5898 5432 292 381 45 0 chr17 9484231 9484365 -80020188 - MIR3 SINE MIR -19 189 50 800 177 61 61 chr17 9484488 9484598 -80019955 + AluJo SINE Alu 2 114 -198 2304 85 6 38 chr17 9484598 9484914 -80019639 + AluY SINE Alu 1 306 -5 800 177 61 61 chr17 9484914 9484984 -80019569 + AluJo SINE Alu 113 182 -130 699 117 27 0 chr17 9485065 9485176 -80019377 + FRAM SINE Alu 57 170 -6 181 313 47 0 chr17 9485252 9485316 -80019237 - MIR SINE MIR -30 232 166 361 293 63 26 chr17 9485334 9485525 -80019028 + HAL1b LINE L1 482 679 -669 1660 163 0 45 chr17 9485577 9485866 -80018687 + AluJb SINE Alu 1 276 -36 251 179 60 0 chr17 9485868 9485935 -80018618 + C-rich Low_complexity Low_complexity 4 74 0 23 54 0 0 chr17 9486926 9486963 -80017590 + GC_rich Low_complexity Low_complexity 1 37 0 209 140 0 40 chr17 9487339 9487389 -80017164 + (CCCCG)n Simple_repeat Simple_repeat 2 49 0 304 273 12 31 chr17 9489603 9489764 -80014789 + G-rich Low_complexity Low_complexity 5 162 0 597 136 27 20 chr17 9489789 9489936 -80014617 + GA-rich Low_complexity Low_complexity 1 148 0 372 282 24 40 chr17 9490155 9490279 -80014274 + L2 LINE L2 3146 3267 -5 428 256 41 33 chr17 9491204 9491325 -80013228 - AluJb SINE Alu -70 242 121 375 274 34 8 chr17 9491475 9491592 -80012961 - L1ME LINE L1 -440 5722 5603 2255 111 7 0 chr17 9491669 9491976 -80012577 + AluSp SINE Alu 1 309 -4 1551 164 45 16 chr17 9492091 9492402 -80012151 + L1MA9 LINE L1 5993 6312 0 22 56 0 0 chr17 9494032 9494068 -80010485 + GC_rich Low_complexity Low_complexity 1 36 0 1255 129 0 6 chr17 9495766 9495944 -80008609 - AluSg/x SINE Alu -12 300 124 270 0 0 0 chr17 9495945 9495975 -80008578 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2302 88 3 0 chr17 9495975 9496259 -80008294 - AluSx SINE Alu -27 285 1 275 256 24 80 chr17 9496927 9497052 -80007501 - MARNA DNA Mariner -13 573 456 562 292 73 19 chr17 9497067 9497327 -80007226 + MARNA DNA Mariner 193 466 -120 450 258 78 8 chr17 9497485 9497613 -80006940 + MIR SINE MIR 9 145 -117 2199 110 10 3 chr17 9497616 9497924 -80006629 + AluSx SINE Alu 1 310 -2 23 33 0 0 chr17 9497925 9497955 -80006598 + AT_rich Low_complexity Low_complexity 1 30 0 192 243 0 0 chr17 9498580 9498654 -80005899 + C-rich Low_complexity Low_complexity 1 74 0 265 38 0 57 chr17 9498755 9498808 -80005745 + AluY SINE Alu 251 300 0 1150 292 181 35 chr17 9498842 9499080 -80005473 + L1 LINE L1 4281 4483 -1663 2348 101 13 3 chr17 9499080 9499388 -80005165 + AluSx SINE Alu 1 311 -1 1150 292 181 35 chr17 9499388 9500111 -80004442 + L1 LINE L1 4483 5382 -764 488 277 97 59 chr17 9500231 9500737 -80003816 - L1ME4a LINE L1 -215 5906 5382 435 369 110 19 chr17 9500792 9501155 -80003398 - L1ME4a LINE L1 -865 5281 4886 1913 164 0 19 chr17 9502208 9502526 -80002027 - AluJo SINE Alu 0 312 1 419 305 17 42 chr17 9503242 9503419 -80001134 + MIR SINE MIR 24 196 -62 432 55 0 0 chr17 9503898 9503953 -80000600 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 346 278 152 63 chr17 9503956 9504258 -80000295 - L2 LINE L2 -12 3260 2932 233 234 0 32 chr17 9505013 9505107 -79999446 + G-rich Low_complexity Low_complexity 3 93 0 630 270 98 14 chr17 9505293 9505508 -79999045 + MIR SINE MIR 30 262 0 1291 156 0 62 chr17 9505577 9505738 -79998815 - AluJb SINE Alu -18 294 149 2205 117 0 3 chr17 9505738 9506037 -79998516 - AluSq SINE Alu -15 298 1 1291 156 0 62 chr17 9506037 9506099 -79998454 - AluJb SINE Alu -163 149 85 1027 177 11 11 chr17 9506113 9506294 -79998259 - AluJo SINE Alu -12 300 120 503 331 62 0 chr17 9506384 9506562 -79997991 - MIR SINE MIR -42 220 32 2460 96 0 3 chr17 9506736 9507050 -79997503 + AluSp SINE Alu 1 313 0 501 300 69 55 chr17 9507440 9507930 -79996623 - L2 LINE L2 -386 2928 2432 281 325 182 41 chr17 9508522 9508891 -79995662 - L2 LINE L2 -1816 1498 1078 391 254 0 37 chr17 9508986 9509152 -79995401 - MER3 DNA MER1_type 0 209 5 2411 91 3 10 chr17 9509536 9509845 -79994708 - AluSq SINE Alu -6 307 1 185 0 0 39 chr17 9509849 9509875 -79994678 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2261 124 0 6 chr17 9510191 9510505 -79994048 - AluSx SINE Alu 0 312 1 736 270 42 21 chr17 9510520 9510757 -79993796 - MIR SINE MIR -6 256 15 200 217 22 18 chr17 9511052 9511119 -79993434 + MIR SINE MIR 52 119 -89 675 157 5 38 chr17 9511257 9511442 -79993111 + CT-rich Low_complexity Low_complexity 2 180 0 833 102 34 23 chr17 9511465 9511641 -79992912 + CT-rich Low_complexity Low_complexity 1 178 0 1565 202 3 37 chr17 9511649 9511971 -79992582 - AluJo SINE Alu -1 311 1 21 36 0 0 chr17 9512215 9512243 -79992310 + AT_rich Low_complexity Low_complexity 1 28 0 2188 113 0 13 chr17 9512244 9512545 -79992008 - AluSx SINE Alu -9 303 7 306 241 65 0 chr17 9512678 9512770 -79991783 - MIR SINE MIR -62 146 57 1370 119 0 0 chr17 9512791 9513004 -79991549 + AluSg/x SINE Alu 105 317 0 381 283 26 53 chr17 9513010 9513162 -79991391 + L2 LINE L2 2923 3070 -243 293 283 57 9 chr17 9513825 9513931 -79990622 + MIR3 SINE MIR 91 201 -7 1514 192 136 41 chr17 9514550 9514684 -79989869 - MLT1D LTR MaLR -2 503 383 2943 171 4 17 chr17 9514684 9515215 -79989338 - MER1A DNA MER1_type 0 527 4 1514 192 136 41 chr17 9515215 9515522 -79989031 - MLT1D LTR MaLR -122 383 20 442 205 34 17 chr17 9515525 9515642 -79988911 - AluSg/x SINE Alu -22 287 169 1515 167 38 71 chr17 9515759 9516055 -79988498 + L1MB8 LINE L1 5825 6108 -70 2181 101 30 3 chr17 9516055 9516353 -79988200 - AluSq SINE Alu -7 306 1 1515 167 38 71 chr17 9516353 9516421 -79988132 + L1MB8 LINE L1 6108 6177 -1 652 247 23 11 chr17 9516424 9516598 -79987955 - MIR SINE MIR -69 193 18 2157 93 32 39 chr17 9516801 9517113 -79987440 - AluSg SINE Alu 0 310 1 230 333 29 0 chr17 9518159 9518264 -79986289 - MIR3 SINE MIR -25 183 76 189 0 0 0 chr17 9518264 9518285 -79986268 + (TGGG)n Simple_repeat Simple_repeat 2 22 0 2269 96 6 16 chr17 9519793 9520107 -79984446 - AluSx SINE Alu -1 311 1 290 282 11 39 chr17 9520446 9520683 -79983870 + (CGGGG)n Simple_repeat Simple_repeat 1 230 0 212 333 9 9 chr17 9520724 9520829 -79983724 + G-rich Low_complexity Low_complexity 1 105 0 341 305 20 9 chr17 9521446 9521598 -79982955 - MIR SINE MIR -62 146 42 266 326 50 39 chr17 9521945 9522126 -79982427 - L3 LINE CR1 -7 1570 1388 512 241 176 6 chr17 9522353 9522523 -79982030 + MIR SINE MIR 8 206 -56 407 278 87 0 chr17 9522675 9522790 -79981763 + L1ME4a LINE L1 5803 5927 -194 298 267 38 0 chr17 9522794 9522899 -79981654 + L1ME4a LINE L1 5967 6075 -46 2357 78 34 7 chr17 9523459 9523754 -79980799 - AluSx SINE Alu -9 303 1 296 342 76 6 chr17 9524098 9524256 -79980297 - L3 LINE CR1 -310 1267 1099 180 0 0 0 chr17 9524429 9524449 -79980104 + (TA)n Simple_repeat Simple_repeat 2 21 0 2308 77 52 0 chr17 9524449 9524735 -79979818 - AluSx SINE Alu -11 301 1 340 244 122 9 chr17 9524740 9524855 -79979698 - L1ME LINE L1 -315 5806 5679 827 254 21 5 chr17 9525102 9525291 -79979262 + MER82 DNA MER2_type 1 192 -461 2122 97 0 0 chr17 9525294 9525553 -79979000 + AluSg SINE Alu 1 259 -51 327 279 0 0 chr17 9525577 9525656 -79978897 + Charlie4 DNA MER1_type 1880 1958 -3 288 0 0 0 chr17 9526074 9526106 -79978447 + (T)n Simple_repeat Simple_repeat 1 32 0 414 283 68 60 chr17 9526219 9526301 -79978252 + L1ME4a LINE L1 5351 5431 -690 2550 84 0 0 chr17 9526301 9526609 -79977944 - AluSg SINE Alu -2 308 1 414 283 68 60 chr17 9526609 9526777 -79977776 + L1ME4a LINE L1 5431 5603 -518 242 237 13 0 chr17 9526826 9526902 -79977651 + (TA)n Simple_repeat Simple_repeat 2 78 0 448 327 33 19 chr17 9526906 9527120 -79977433 + L1ME4a LINE L1 5610 5826 -295 310 266 90 90 chr17 9527132 9527309 -79977244 + L1ME4a LINE L1 5859 6035 -86 2287 92 6 29 chr17 9527309 9527625 -79976928 - AluSx SINE Alu -3 309 1 1634 211 13 0 chr17 9527660 9527958 -79976595 + AluJb SINE Alu 3 304 -8 594 164 0 9 chr17 9527996 9528124 -79976429 + L1MB3 LINE L1 5665 5786 -385 1957 138 10 10 chr17 9528125 9528259 -79976294 + AluSx SINE Alu 1 134 -178 2576 63 0 0 chr17 9528259 9528558 -79975995 + AluY SINE Alu 1 299 -12 1957 138 10 10 chr17 9528558 9528713 -79975840 + AluSx SINE Alu 133 290 -22 1542 145 0 9 chr17 9528727 9528954 -79975599 + AluSx SINE Alu 1 225 -87 230 27 0 0 chr17 9528957 9528994 -79975559 + Alu SINE Alu 130 166 0 1798 138 75 11 chr17 9529004 9529128 -79975425 + L1MB3 LINE L1 5769 5884 -299 1750 76 5 0 chr17 9529128 9529338 -79975215 + AluSx SINE Alu 2 212 -100 1798 138 75 11 chr17 9529338 9529562 -79974991 + L1MB3 LINE L1 5884 6139 -44 2147 86 10 17 chr17 9529564 9529865 -79974688 + AluSp SINE Alu 1 299 -14 2134 106 0 4 chr17 9530376 9530649 -79973904 - AluSx SINE Alu -40 272 1 1000 265 89 84 chr17 9530656 9530821 -79973732 - L1M4 LINE L1 -3056 3090 2927 1035 149 0 12 chr17 9530821 9530989 -79973564 - FAM SINE Alu -9 166 1 1000 265 89 84 chr17 9530989 9531324 -79973229 - L1M4 LINE L1 -3219 2927 2595 1957 138 23 7 chr17 9531324 9531628 -79972925 - AluSx SINE Alu -3 309 1 1000 265 89 84 chr17 9531628 9531973 -79972580 - L1M4 LINE L1 -3551 2595 2236 2398 93 6 6 chr17 9531973 9532285 -79972268 + AluSx SINE Alu 1 312 0 1000 265 89 84 chr17 9532285 9532392 -79972161 - L1M4 LINE L1 -3910 2236 2131 219 253 11 11 chr17 9532441 9532532 -79972021 + T-rich Low_complexity Low_complexity 6 96 0 620 92 0 0 chr17 9532611 9532698 -79971855 + Alu SINE Alu 220 306 -6 310 349 103 18 chr17 9532757 9533038 -79971515 - L1M4 LINE L1 -1218 4928 4624 223 274 119 0 chr17 9533805 9533889 -79970664 + MIR SINE MIR 56 149 -113 228 184 214 41 chr17 9534120 9534218 -79970335 - MIR3 SINE MIR -23 185 71 195 42 0 0 chr17 9534300 9534324 -79970229 + (CA)n Simple_repeat Simple_repeat 2 25 0 297 305 0 11 chr17 9534357 9534452 -79970101 - MER5A DNA MER1_type -89 100 7 297 308 17 33 chr17 9535290 9535410 -79969143 + L3 LINE CR1 1446 1563 -14 24 53 0 0 chr17 9537452 9537490 -79967063 + AT_rich Low_complexity Low_complexity 1 38 0 2401 91 0 0 chr17 9538061 9538358 -79966195 + AluSq SINE Alu 1 297 -16 739 272 89 4 chr17 9538656 9538891 -79965662 - MIR SINE MIR -4 258 4 2441 81 10 0 chr17 9540144 9540439 -79964114 + AluSp SINE Alu 1 298 -15 1904 168 3 13 chr17 9540467 9540765 -79963788 + AluJb SINE Alu 1 295 -17 272 299 0 0 chr17 9540836 9540903 -79963650 - L2 LINE L2 0 3272 3206 436 171 136 0 chr17 9540923 9541011 -79963542 - FLAM_A SINE Alu -41 101 2 938 209 133 4 chr17 9541577 9541802 -79962751 + MER82 DNA MER2_type 361 614 -39 2412 122 54 33 chr17 9542162 9542587 -79961966 + Tigger2a DNA MER2_type 1 434 0 1399 215 65 63 chr17 9542759 9542884 -79961669 + MLT1C LTR MaLR 6 129 -338 2335 82 3 10 chr17 9542884 9543187 -79961366 + AluSg SINE Alu 1 301 -9 1399 215 65 63 chr17 9543187 9543522 -79961031 + MLT1C LTR MaLR 129 467 0 2290 108 0 10 chr17 9543546 9543843 -79960710 + AluSx SINE Alu 1 294 -18 1170 272 58 21 chr17 9544026 9544692 -79959861 + L1ME3A LINE L1 5174 5862 -308 2376 107 0 0 chr17 9544944 9545254 -79959299 + AluSg SINE Alu 1 310 0 312 241 135 21 chr17 9545891 9546032 -79958521 + LTR67 LTR ERVL 401 557 0 1219 186 5 5 chr17 9546246 9546466 -79958087 - MER58A DNA MER1_type 0 224 5 219 319 165 16 chr17 9547040 9547228 -79957325 + MIR SINE MIR 33 248 -14 195 42 0 0 chr17 9547240 9547264 -79957289 + (ATG)n Simple_repeat Simple_repeat 3 26 0 2254 89 0 4 chr17 9547304 9547585 -79956968 + AluSx SINE Alu 1 280 -32 717 12 0 0 chr17 9547587 9547669 -79956884 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 253 251 14 0 chr17 9547914 9547985 -79956568 + MIR SINE MIR 49 120 -88 531 205 0 27 chr17 9548027 9548139 -79956414 - MER5A DNA MER1_type -80 109 1 2621 44 10 0 chr17 9548805 9549100 -79955453 + AluY SINE Alu 1 298 -13 310 313 188 17 chr17 9549143 9549319 -79955234 + L3 LINE CR1 1020 1225 -352 2544 66 0 16 chr17 9550835 9551139 -79953414 - AluY SINE Alu -12 299 1 838 177 11 0 chr17 9551153 9551334 -79953219 + L1M4 LINE L1 5298 5480 -704 1682 188 22 4 chr17 9551340 9551651 -79952902 + AluJo SINE Alu 1 316 0 2297 75 7 0 chr17 9551651 9551972 -79952581 + AluSx SINE Alu 2 324 0 425 284 39 44 chr17 9551975 9552179 -79952374 + L2 LINE L2 2923 3125 -188 382 273 9 0 chr17 9552479 9552592 -79951961 + MER20B DNA MER1_type 81 197 -22 2548 80 3 0 chr17 9552622 9552934 -79951619 - AluSp SINE Alu 0 313 1 257 255 64 21 chr17 9553880 9553974 -79950579 - MIR SINE MIR -88 174 77 4141 165 57 25 chr17 9554628 9555435 -79949118 + MER21B LTR ERV1 1 833 -30 2277 114 0 3 chr17 9556197 9556504 -79948049 - AluSx SINE Alu -6 306 1 658 295 71 4 chr17 9556875 9557156 -79947397 + L3 LINE CR1 733 1032 -545 2152 130 10 0 chr17 9557239 9557539 -79947014 - AluSx SINE Alu -9 303 1 570 308 120 39 chr17 9557610 9557993 -79946560 + MLT1L LTR MaLR 171 584 -31 256 327 10 0 chr17 9558043 9558144 -79946409 + L3 LINE CR1 1066 1167 -410 988 103 0 0 chr17 9558287 9558413 -79946140 - AluSg/x SINE Alu -48 264 139 2111 86 17 0 chr17 9558787 9559088 -79945465 - AluY SINE Alu -5 306 1 752 287 88 35 chr17 9559246 9559699 -79944854 - MLT1J LTR MaLR -33 478 2 250 236 18 0 chr17 9559759 9559814 -79944739 + MIR SINE MIR 111 166 -96 509 221 30 8 chr17 9559894 9560025 -79944528 - L2 LINE L2 0 3313 3180 773 154 0 29 chr17 9560360 9560496 -79944057 + FLAM_A SINE Alu 1 132 -1 371 295 78 78 chr17 9560512 9560756 -79943797 - L2 LINE L2 -6 3266 3023 395 280 0 24 chr17 9560768 9560893 -79943660 + (CAT)n Simple_repeat Simple_repeat 2 123 0 375 212 15 15 chr17 9560919 9561056 -79943497 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 657 299 29 25 chr17 9561104 9561308 -79943245 - MIR SINE MIR -18 244 40 412 329 68 19 chr17 9561387 9561709 -79942844 - L2 LINE L2 -342 2972 2635 446 276 118 54 chr17 9563024 9563206 -79941347 - MIR SINE MIR -8 254 54 2218 95 7 0 chr17 9563206 9563510 -79941043 - AluSx SINE Alu -6 306 1 446 276 118 54 chr17 9563510 9563548 -79941005 - MIR SINE MIR -208 54 20 2456 68 0 3 chr17 9563623 9563933 -79940620 - AluY SINE Alu -2 309 1 2183 189 55 121 chr17 9563945 9564795 -79939758 - L1MC4a LINE L1 0 7811 7113 286 371 30 8 chr17 9564803 9564935 -79939618 - MER5A DNA MER1_type 0 189 55 2129 120 3 0 chr17 9564943 9565243 -79939310 + AluSx SINE Alu 2 302 -10 9771 95 31 33 chr17 9565243 9565902 -79938651 + Tigger1 DNA MER2_type 951 1610 -808 2237 89 0 3 chr17 9565902 9566205 -79938348 + AluSq SINE Alu 1 302 -11 9771 95 31 33 chr17 9566205 9567012 -79937541 + Tigger1 DNA MER2_type 1610 2414 -4 1716 188 23 53 chr17 9567016 9567082 -79937471 - L1M4 LINE L1 -538 5646 5580 1802 178 3 0 chr17 9567082 9567391 -79937162 - AluJb SINE Alu 0 312 3 1716 188 23 53 chr17 9567391 9567867 -79936686 - L1M4 LINE L1 -604 5580 5122 799 269 20 20 chr17 9567962 9568308 -79936245 - L1M4 LINE L1 -2768 3378 3033 2141 104 0 3 chr17 9569366 9569663 -79934890 + AluSx SINE Alu 5 300 -12 283 295 74 68 chr17 9569687 9570019 -79934534 + L1 LINE L1 2831 3159 -2987 2159 93 3 13 chr17 9570019 9570320 -79934233 + AluSp SINE Alu 2 299 -14 283 295 74 68 chr17 9570320 9570376 -79934177 + L1 LINE L1 3159 3213 -2933 348 273 91 59 chr17 9570376 9570629 -79933924 + MIR SINE MIR 2 262 0 283 295 74 68 chr17 9570629 9571096 -79933457 + L1 LINE L1 3213 3675 -2471 2217 85 7 0 chr17 9571096 9571389 -79933164 - AluSg SINE Alu -15 295 1 873 182 55 12 chr17 9571395 9571560 -79932993 - FAM SINE Alu -3 172 1 283 295 74 68 chr17 9571560 9571614 -79932939 + L1 LINE L1 3679 3755 -2391 862 261 132 17 chr17 9571735 9571885 -79932668 + L1ME3A LINE L1 5777 5908 -262 2460 62 0 0 chr17 9571885 9572192 -79932361 + AluY SINE Alu 3 309 -2 862 261 132 17 chr17 9572192 9572390 -79932163 + L1ME3A LINE L1 5908 6165 -5 2289 109 0 0 chr17 9572406 9572718 -79931835 + AluSx SINE Alu 1 312 0 409 214 11 0 chr17 9572726 9572815 -79931738 + MIR SINE MIR 162 251 -11 300 282 100 18 chr17 9572977 9573087 -79931466 - MIR SINE MIR -133 129 11 2410 71 3 3 chr17 9573183 9573494 -79931059 - AluSp SINE Alu -2 311 1 770 185 0 7 chr17 9573504 9573639 -79930914 - FLAM_C SINE Alu -8 135 2 198 0 0 0 chr17 9573728 9573750 -79930803 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2036 125 7 0 chr17 9573876 9574172 -79930381 + AluSx SINE Alu 1 298 -14 1863 122 15 61 chr17 9575140 9575467 -79929086 - AluSx SINE Alu 0 312 1 350 323 112 31 chr17 9575597 9575758 -79928795 + MER117 DNA MER1_type 1 174 -23 2271 89 13 0 chr17 9576361 9576665 -79927888 - AluSg SINE Alu -2 308 1 2024 106 10 0 chr17 9577121 9577413 -79927140 - AluSc SINE Alu -14 295 1 1212 112 28 6 chr17 9577414 9577593 -79926960 - MSTA LTR MaLR -229 199 17 1039 204 44 54 chr17 9577629 9577923 -79926630 + L1ME3A LINE L1 5827 6117 -53 1452 241 62 63 chr17 9578176 9579138 -79925415 + L1MD3 LINE L1 5338 6001 -1994 3195 181 67 44 chr17 9578249 9578451 -79926102 + L1MB8 LINE L1 5415 5611 -567 2114 114 7 0 chr17 9578451 9578749 -79925804 - AluSx SINE Alu -10 302 3 3195 181 67 44 chr17 9578749 9579293 -79925260 + L1MB8 LINE L1 5611 6178 0 1408 161 11 46 chr17 9579395 9579680 -79924873 + AluJo SINE Alu 33 307 -5 2808 240 77 38 chr17 9579696 9580971 -79923582 + L1ME1 LINE L1 3956 6161 -5 200 277 60 0 chr17 9581227 9581310 -79923243 + (TAAA)n Simple_repeat Simple_repeat 3 90 0 260 320 36 23 chr17 9581361 9581580 -79922973 + L1M4 LINE L1 4795 5016 -1130 516 265 28 22 chr17 9581582 9581763 -79922790 + L1MEd LINE L1 4 185 -5934 294 309 12 0 chr17 9581883 9581967 -79922586 + L1MEd LINE L1 244 328 -5791 203 191 24 0 chr17 9581967 9582009 -79922544 - L2 LINE L2 -5 3308 3266 292 88 35 0 chr17 9582211 9582268 -79922285 + GA-rich Low_complexity Low_complexity 1 59 0 665 277 145 21 chr17 9582271 9582702 -79921851 - L2 LINE L2 -214 3099 2610 744 315 56 45 chr17 9582713 9583227 -79921326 + L1MEd LINE L1 331 850 -5269 713 250 123 4 chr17 9583216 9583452 -79921101 + L1ME3 LINE L1 5859 6122 -40 * 353 154 46 0 chr17 9583789 9583854 -79920699 - MIR SINE MIR -55 153 86 972 150 6 6 chr17 9583925 9584092 -79920461 + FRAM SINE Alu 10 176 0 874 168 0 7 chr17 9584243 9584398 -79920155 + FRAM SINE Alu 1 151 -25 360 57 0 0 chr17 9584405 9584458 -79920095 + L1MB3 LINE L1 6127 6179 -4 2359 94 0 0 chr17 9585190 9585497 -79919056 + AluSc SINE Alu 1 307 -2 2229 84 0 7 chr17 9586233 9586532 -79918021 - AluSx SINE Alu -15 297 1 239 258 0 32 chr17 9586966 9587028 -79917525 + MIR SINE MIR 182 241 -21 1419 110 10 5 chr17 9588104 9588313 -79916240 - AluSg/x SINE Alu -18 292 83 183 42 0 0 chr17 9588557 9588581 -79915972 + (TATAA)n Simple_repeat Simple_repeat 4 27 0 246 156 0 0 chr17 9588688 9588733 -79915820 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 525 309 49 10 chr17 9588744 9588948 -79915605 + MIR SINE MIR 8 219 -43 197 244 0 0 chr17 9589011 9589056 -79915497 - L2 LINE L2 -15 3257 3213 219 229 0 21 chr17 9591247 9591295 -79913258 + GA-rich Low_complexity Low_complexity 4 50 0 21 36 0 0 chr17 9592794 9592822 -79911731 + GC_rich Low_complexity Low_complexity 1 28 0 3212 124 15 35 chr17 9594815 9595084 -79909469 - L1MB3 LINE L1 -8 6175 5902 2065 117 0 10 chr17 9595084 9595392 -79909161 - AluSx SINE Alu -7 305 1 3212 124 15 35 chr17 9595392 9595515 -79909038 - L1MB3 LINE L1 -281 5902 5778 2674 82 36 6 chr17 9595515 9595879 -79908674 - THE1C LTR MaLR 0 375 1 3212 124 15 35 chr17 9595879 9596032 -79908521 - L1MB3 LINE L1 -405 5778 5640 2464 221 90 37 chr17 9596042 9596632 -79907921 - L1ME3A LINE L1 0 6170 5530 2585 92 19 29 chr17 9596632 9597011 -79907542 + THE1C LTR MaLR 1 375 0 2464 221 90 37 chr17 9597011 9597177 -79907376 - L1ME3A LINE L1 -640 5530 5374 1501 140 49 18 chr17 9597190 9597475 -79907078 - AluJo SINE Alu -18 294 1 206 355 57 87 chr17 9597935 9598301 -79906252 - L2 LINE L2 -1 3271 2917 2005 109 0 20 chr17 9598594 9598898 -79905655 + AluSc SINE Alu 1 298 -11 314 193 28 92 chr17 9598968 9599077 -79905476 - L1MCa LINE L1 -4361 2065 1964 823 146 0 29 chr17 9599081 9599218 -79905335 + FLAM_C SINE Alu 1 133 0 310 245 128 20 chr17 9599234 9599336 -79905217 + HAL1b LINE L1 1232 1344 -4 238 227 91 18 chr17 9599514 9599624 -79904929 + L1ME4a LINE L1 5599 5716 -405 242 154 0 15 chr17 9599627 9599692 -79904861 + GA-rich Low_complexity Low_complexity 4 67 0 430 291 67 32 chr17 9599692 9599776 -79904777 + L1ME4a LINE L1 5724 5804 -317 2044 91 10 14 chr17 9599776 9600073 -79904480 - AluSq SINE Alu -17 296 1 430 291 67 32 chr17 9600073 9600332 -79904221 + L1ME4a LINE L1 5804 6079 -42 2087 121 7 7 chr17 9601543 9601849 -79902704 - AluSg SINE Alu -2 308 3 255 312 64 29 chr17 9602349 9602522 -79902031 + L1 LINE L1 4045 4223 -1923 2439 68 0 3 chr17 9602523 9602833 -79901720 + AluY SINE Alu 1 309 -2 1595 117 73 4 chr17 9603684 9603931 -79900622 - AluSx SINE Alu -15 297 34 2117 104 7 3 chr17 9603951 9604249 -79900304 - AluSx SINE Alu -13 299 1 2216 92 0 3 chr17 9604326 9604620 -79899933 - AluSg SINE Alu -17 293 1 839 182 0 0 chr17 9604693 9604825 -79899728 - FLAM_A SINE Alu 0 133 2 21 0 0 0 chr17 9605108 9605129 -79899424 + AT_rich Low_complexity Low_complexity 1 21 0 400 315 122 20 chr17 9605264 9605559 -79898994 - L2 LINE L2 -1 3312 2988 2068 120 0 0 chr17 9605730 9606022 -79898531 + AluSx SINE Alu 1 292 -20 900 161 62 0 chr17 9606031 9606192 -79898361 + AluJb SINE Alu 121 291 -21 239 336 182 21 chr17 9606194 9606727 -79897826 - L2 LINE L2 -618 2696 2078 200 170 19 0 chr17 9606727 9606780 -79897773 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 2164 53 11 7 chr17 9607128 9607411 -79897142 + AluY SINE Alu 12 295 -16 2192 88 7 3 chr17 9607567 9607862 -79896691 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr17 9608066 9608087 -79896466 + AT_rich Low_complexity Low_complexity 1 21 0 2163 118 0 3 chr17 9608962 9609246 -79895307 + AluSg SINE Alu 1 290 -20 241 35 0 0 chr17 9609246 9609275 -79895278 + (CAAAA)n Simple_repeat Simple_repeat 2 175 0 2163 118 0 3 chr17 9609275 9609296 -79895257 + AluSg SINE Alu 290 310 0 610 192 245 0 chr17 9609321 9609472 -79895081 + MER5A DNA MER1_type 1 188 -1 2469 82 0 0 chr17 9609973 9610267 -79894286 - AluSc SINE Alu -13 296 3 2737 154 2 7 chr17 9610439 9610875 -79893678 - Tigger2a DNA MER2_type 0 434 1 3093 161 31 27 chr17 9611131 9611716 -79892837 - L1MB5 LINE L1 0 6174 5588 1034 242 8 4 chr17 9611861 9612101 -79892452 - MIR SINE MIR -16 246 6 306 73 0 0 chr17 9612280 9612321 -79892232 + (T)n Simple_repeat Simple_repeat 1 41 0 270 205 156 74 chr17 9612321 9612443 -79892110 - MIR SINE MIR -14 248 117 585 103 41 0 chr17 9612668 9612765 -79891788 + L1PB3 LINE L1 6053 6153 -1 2025 136 0 7 chr17 9612775 9613077 -79891476 + AluSx SINE Alu 1 300 -12 2204 101 10 0 chr17 9614608 9614896 -79889657 + AluSq SINE Alu 4 294 -19 1395 163 6 131 chr17 9614899 9615243 -79889310 + AluJb SINE Alu 2 302 0 523 289 41 5 chr17 9615284 9615502 -79889051 + L2 LINE L2 2843 3068 -245 322 165 12 12 chr17 9615701 9615786 -79888767 + (TGAA)n Simple_repeat Simple_repeat 1 85 0 258 339 59 0 chr17 9617278 9617396 -79887157 - L2 LINE L2 -4 3268 3144 1388 159 14 0 chr17 9617689 9617903 -79886650 - MER58A DNA MER1_type -1 223 7 3044 223 26 41 chr17 9618031 9618166 -79886387 - MSTD-int LTR MaLR -1013 722 586 743 126 0 0 chr17 9618166 9618269 -79886284 - U6 snRNA snRNA -2 105 3 3044 223 26 41 chr17 9618269 9618865 -79885688 - MSTD-int LTR MaLR -1149 586 2 739 179 30 65 chr17 9618868 9619036 -79885517 - MSTD LTR MaLR -1 395 234 401 227 21 0 chr17 9620267 9620364 -79884189 - AluSg1 SINE Alu -209 100 2 1758 153 0 53 chr17 9620425 9620745 -79883808 - AluSx SINE Alu -9 303 1 1485 176 66 4 chr17 9620897 9621170 -79883383 - Tigger3(Golem) DNA MER2_type -11 3018 2729 2110 121 0 0 chr17 9621170 9621450 -79883103 + AluSg SINE Alu 1 280 -30 225 287 46 0 chr17 9621680 9621767 -79882786 - Tigger5 DNA MER2_type -5 2318 2228 1714 155 76 10 chr17 9621867 9622170 -79882383 + MER31A LTR ERV1 158 480 -5 2307 112 0 0 chr17 9623239 9623542 -79881011 + AluSx SINE Alu 1 303 -9 479 241 102 89 chr17 9624363 9624757 -79879796 - HAL1 LINE L1 -740 1767 1369 445 262 22 142 chr17 9624746 9624923 -79879630 - HAL1 LINE L1 -1431 1076 964 * 1430 74 5 0 chr17 9624923 9625112 -79879441 + L1PA6 LINE L1 5960 6149 -5 445 262 22 142 chr17 9625112 9625301 -79879252 - HAL1 LINE L1 -1543 964 754 186 43 0 0 chr17 9625452 9625475 -79879078 + (T)n Simple_repeat Simple_repeat 1 23 0 1785 148 50 7 chr17 9625758 9626035 -79878518 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9626038 9626353 -79878200 + AluSg SINE Alu 1 309 -1 1267 120 0 11 chr17 9626824 9627007 -79877546 + AluSg/x SINE Alu 112 292 -18 455 295 76 9 chr17 9627027 9627251 -79877302 - MIR SINE MIR -1 261 23 23 0 0 0 chr17 9628607 9628630 -79875923 + AT_rich Low_complexity Low_complexity 1 23 0 1970 98 0 0 chr17 9628789 9629044 -79875509 + AluSc SINE Alu 41 295 -14 235 133 17 17 chr17 9629048 9629108 -79875445 + A-rich Low_complexity Low_complexity 1 60 0 1973 232 87 33 chr17 9629108 9629661 -79874892 + MER72 LTR ERV1 83 673 -49 2054 120 3 20 chr17 9629661 9629962 -79874591 + AluSx SINE Alu 5 300 -12 1973 232 87 33 chr17 9629962 9630015 -79874538 + MER72 LTR ERV1 673 722 0 665 236 28 0 chr17 9630135 9630279 -79874274 + MER21B LTR ERV1 5 152 -711 1023 108 0 0 chr17 9630388 9630518 -79874035 - AluSg SINE Alu -179 131 2 234 0 0 0 chr17 9631516 9631542 -79873011 + (A)n Simple_repeat Simple_repeat 1 26 0 2911 213 83 8 chr17 9632822 9633457 -79871096 + MER21B LTR ERV1 121 803 -60 2137 104 37 0 chr17 9633986 9634283 -79870270 + AluY SINE Alu 1 308 -3 953 155 19 25 chr17 9634686 9634847 -79869706 - FRAM SINE Alu -5 161 2 1369 196 29 29 chr17 9635373 9635684 -79868869 + AluJb SINE Alu 1 311 -1 307 235 61 10 chr17 9635701 9635799 -79868754 + AluSp SINE Alu 3 105 -198 244 53 0 0 chr17 9635899 9635937 -79868616 + Alu SINE Alu 265 302 0 2440 81 16 0 chr17 9636284 9636592 -79867961 + AluSq SINE Alu 1 313 0 2341 167 16 11 chr17 9636709 9637086 -79867467 + MER44D DNA MER2_type 1 379 -326 1136 153 0 26 chr17 9637095 9637285 -79867268 + AluJo SINE Alu 17 201 -111 1022 118 53 21 chr17 9637287 9637365 -79867188 + Tigger7 DNA MER2_type 2178 2252 -235 198 0 0 0 chr17 9637365 9637387 -79867166 + (GA)n Simple_repeat Simple_repeat 1 22 0 1022 118 53 21 chr17 9637387 9637495 -79867058 + Tigger7 DNA MER2_type 2252 2370 -117 2316 97 0 7 chr17 9637495 9637803 -79866750 + AluSq SINE Alu 1 306 -7 1571 138 12 0 chr17 9637978 9638225 -79866328 + LTR48B LTR ERV1 7 256 -388 2477 73 0 3 chr17 9638226 9638528 -79866025 + AluY SINE Alu 3 303 -8 1993 82 0 0 chr17 9638750 9638994 -79865559 + AluSq SINE Alu 62 305 -8 1168 184 58 51 chr17 9639659 9639953 -79864600 - AluJo SINE Alu -11 301 6 228 133 0 0 chr17 9640299 9640364 -79864189 - Alu SINE Alu 0 318 254 681 199 164 59 chr17 9640527 9640783 -79863770 - MER102a DNA MER1_type -14 316 34 230 217 43 0 chr17 9640862 9640931 -79863622 + CT-rich Low_complexity Low_complexity 3 74 0 2294 84 0 14 chr17 9641088 9641384 -79863169 + AluSq SINE Alu 1 292 -21 191 225 0 0 chr17 9642757 9642797 -79861756 + MIR3 SINE MIR 154 193 -15 2112 82 0 38 chr17 9643056 9643386 -79861167 - AluY SINE Alu 0 319 1 2014 128 21 0 chr17 9643584 9643874 -79860679 - AluSx SINE Alu -16 296 1 23 33 0 0 chr17 9644290 9644320 -79860233 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr17 9645242 9645284 -79859269 + AT_rich Low_complexity Low_complexity 1 42 0 2230 84 0 7 chr17 9645397 9645695 -79858858 + AluSx SINE Alu 11 306 -6 1509 121 117 16 chr17 9645958 9646237 -79858316 + AluSx SINE Alu 1 305 0 3029 179 10 62 chr17 9646864 9647040 -79857513 + L1MC3 LINE L1 5892 6076 -1709 2172 61 6 98 chr17 9647040 9647367 -79857186 + AluSq SINE Alu 1 297 -16 3029 179 10 62 chr17 9647367 9647754 -79856799 + L1MC3 LINE L1 6076 6417 -1368 2357 86 0 3 chr17 9647754 9648058 -79856495 + AluSg SINE Alu 1 303 -7 3029 179 10 62 chr17 9648058 9648173 -79856380 + L1MC3 LINE L1 6417 6536 -1249 907 144 77 62 chr17 9648173 9648332 -79856221 + L1MC3 LINE L1 6857 7021 -764 1988 124 12 50 chr17 9648332 9648654 -79855899 + AluSx SINE Alu 1 310 -2 907 144 77 62 chr17 9648654 9648702 -79855851 + L1MC3 LINE L1 7021 7067 -718 230 301 24 24 chr17 9648717 9648800 -79855753 + MLT1F1 LTR MaLR 36 118 -449 2732 184 59 9 chr17 9648800 9649361 -79855192 + L1MC3 LINE L1 7184 7772 -13 461 216 26 92 chr17 9649360 9649405 -79855148 + L1M4 LINE L1 4718 4764 -1382 * 1913 154 3 3 chr17 9649405 9649704 -79854849 + AluSx SINE Alu 1 299 -13 461 216 26 92 chr17 9649704 9649811 -79854742 + L1M4 LINE L1 4764 4860 -1286 229 306 0 0 chr17 9650011 9650101 -79854452 - MIR SINE MIR -85 123 33 2481 97 0 0 chr17 9650222 9650532 -79854021 + AluSx SINE Alu 1 310 -2 813 210 0 3 chr17 9650744 9651059 -79853494 + (TGGA)n Simple_repeat Simple_repeat 1 313 0 210 147 0 0 chr17 9651074 9651108 -79853445 + (CATA)n Simple_repeat Simple_repeat 2 35 0 217 353 0 47 chr17 9651858 9651943 -79852610 + L2 LINE L2 3157 3237 -35 2447 81 3 0 chr17 9652373 9652670 -79851883 + AluSp SINE Alu 1 298 -15 537 198 0 0 chr17 9652705 9652806 -79851747 - L1MD3 LINE L1 -15 7980 7880 247 183 76 53 chr17 9652995 9653126 -79851427 - Charlie7 DNA MER1_type 0 2612 2479 282 254 0 0 chr17 9653155 9653214 -79851339 - Charlie7 DNA MER1_type -2518 94 36 216 365 0 0 chr17 9653973 9654036 -79850517 + L2 LINE L2 3210 3272 0 794 221 113 63 chr17 9654562 9654577 -79849976 + HAL1 LINE L1 1121 1134 -1373 1825 150 6 42 chr17 9654577 9654721 -79849832 + AluJo SINE Alu 1 149 -163 2567 52 0 23 chr17 9654721 9655028 -79849525 + AluSg SINE Alu 1 300 -10 1825 150 6 42 chr17 9655028 9655196 -79849357 + AluJo SINE Alu 149 302 -10 794 221 113 63 chr17 9655196 9655560 -79848993 + HAL1 LINE L1 1134 1519 -988 829 247 116 86 chr17 9655596 9655909 -79848644 + HAL1 LINE L1 1728 2030 -477 2355 100 0 0 chr17 9655909 9656210 -79848343 + AluSg SINE Alu 1 301 -9 829 247 116 86 chr17 9656210 9656648 -79847905 + HAL1 LINE L1 2030 2501 -6 2500 247 87 61 chr17 9656829 9657346 -79847207 + L1MC4 LINE L1 6349 6851 -957 1692 137 14 41 chr17 9657346 9657638 -79846915 + AluJo SINE Alu 17 300 -12 2500 247 87 61 chr17 9657638 9657767 -79846786 + L1MC4 LINE L1 6851 6975 -833 1899 34 24 119 chr17 9657767 9658062 -79846491 + AluYb8 SINE Alu 41 307 -11 2500 247 87 61 chr17 9658062 9658347 -79846206 + L1MC4 LINE L1 6975 7251 -557 1818 154 3 10 chr17 9658347 9658640 -79845913 - AluJb SINE Alu 0 312 22 2500 247 87 61 chr17 9658640 9659061 -79845492 + L1MC4 LINE L1 7251 7675 -133 2032 117 10 7 chr17 9659071 9659369 -79845184 + AluSx SINE Alu 1 299 -13 198 0 0 0 chr17 9659705 9659727 -79844826 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 571 285 44 33 chr17 9659839 9660109 -79844444 - L1ME1 LINE L1 -18 6148 5876 * 3816 211 119 36 chr17 9660085 9661189 -79843364 - L1MDb LINE L1 -4110 2296 1072 1614 192 4 0 chr17 9661189 9661465 -79843088 - AluJo SINE Alu -2 310 34 3816 211 119 36 chr17 9661465 9661791 -79842762 - L1MDb LINE L1 -5334 1072 775 298 225 51 87 chr17 9662160 9662298 -79842255 - L1MC4 LINE L1 0 8042 7910 26 0 0 0 chr17 9662339 9662365 -79842188 + AT_rich Low_complexity Low_complexity 1 26 0 2020 135 7 3 chr17 9662365 9662653 -79841900 - AluSx SINE Alu -23 289 1 378 288 66 47 chr17 9662752 9662964 -79841589 - L1MC4 LINE L1 -232 7810 7595 2437 65 0 36 chr17 9662965 9663273 -79841280 - AluSg SINE Alu -8 302 6 2275 109 0 0 chr17 9663288 9663582 -79840971 - AluSq SINE Alu -17 296 3 2358 101 0 0 chr17 9664994 9665300 -79839253 - AluSp SINE Alu -4 309 4 1567 174 6 59 chr17 9666681 9666774 -79837779 + AluJo SINE Alu 1 97 -215 2256 123 3 0 chr17 9666774 9667084 -79837469 + AluSq SINE Alu 1 311 -2 1567 174 6 59 chr17 9667084 9667312 -79837241 + AluJo SINE Alu 97 305 -7 2344 58 4 0 chr17 9668765 9669068 -79835485 - AluY SINE Alu 0 305 2 1134 182 81 8 chr17 9669181 9669417 -79835136 - MER33 DNA MER1_type -69 255 3 373 174 12 23 chr17 9669649 9669735 -79834818 - L1MB8 LINE L1 -1 6177 6093 432 117 62 0 chr17 9669804 9669949 -79834604 + (TA)n Simple_repeat Simple_repeat 1 154 0 2124 125 3 7 chr17 9669949 9670253 -79834300 + AluSq SINE Alu 1 303 -10 255 286 47 22 chr17 9670321 9670506 -79834047 - Charlie8 DNA MER1_type -2204 213 5 2302 99 0 0 chr17 9670850 9671142 -79833411 + AluSx SINE Alu 11 302 -10 2352 89 10 3 chr17 9672357 9672660 -79831893 - AluSg SINE Alu -5 305 1 2364 107 15 12 chr17 9673077 9673415 -79831138 + MER1B DNA MER1_type 1 339 0 2448 80 3 0 chr17 9673664 9673966 -79830587 + AluSx SINE Alu 1 303 -9 515 234 124 0 chr17 9674145 9674282 -79830271 - Charlie8 DNA MER1_type -2167 250 97 44 40 0 13 chr17 9674334 9674371 -79830182 + AT_rich Low_complexity Low_complexity 1 37 -38 188 35 35 0 chr17 9674371 9674400 -79830153 + (TA)n Simple_repeat Simple_repeat 1 30 0 44 40 0 13 chr17 9674400 9674438 -79830115 + AT_rich Low_complexity Low_complexity 37 75 0 2455 81 3 0 chr17 9674444 9674751 -79829802 + AluSp SINE Alu 1 308 -5 2204 91 0 27 chr17 9675730 9676028 -79828525 - AluY SINE Alu -21 290 1 349 279 48 30 chr17 9676296 9676309 -79828244 - MER5A DNA MER1_type -18 160 149 2460 72 0 0 chr17 9676309 9676600 -79827953 - AluY SINE Alu -9 302 12 349 279 48 30 chr17 9676600 9676753 -79827800 - MER5A DNA MER1_type -29 149 7 220 262 0 127 chr17 9677007 9677049 -79827504 + L2 LINE L2 2712 2758 -556 2428 92 0 0 chr17 9677049 9677352 -79827201 + AluSq SINE Alu 3 305 -8 220 262 0 127 chr17 9677352 9677435 -79827118 + L2 LINE L2 2758 2821 -493 2132 108 42 0 chr17 9677734 9678020 -79826533 + AluSx SINE Alu 1 298 -14 1743 157 3 7 chr17 9678667 9678961 -79825592 + AluSg SINE Alu 1 293 -17 228 151 14 55 chr17 9678973 9679046 -79825507 + GA-rich Low_complexity Low_complexity 3 72 0 264 111 0 0 chr17 9679543 9679588 -79824965 + (TG)n Simple_repeat Simple_repeat 1 45 0 301 216 169 14 chr17 9679710 9679858 -79824695 - L1ME4a LINE L1 -2 6119 5949 668 220 32 0 chr17 9679871 9680025 -79824528 + MSTD LTR MaLR 1 159 -237 3178 126 71 15 chr17 9680038 9680556 -79823997 - LTR10A LTR ERV1 -62 547 1 686 176 124 36 chr17 9680557 9680750 -79823803 + MSTD LTR MaLR 176 385 -11 4090 139 21 44 chr17 9680843 9681549 -79823004 + LTR8 LTR ERV1 2 691 0 2465 61 0 7 chr17 9681713 9682009 -79822544 + AluY SINE Alu 1 294 -17 1793 140 13 2 chr17 9682013 9682290 -79822263 + L1PA16 LINE L1 5867 6145 -21 251 177 190 25 chr17 9682536 9682615 -79821938 - L2 LINE L2 -39 3233 3142 21 0 0 0 chr17 9684126 9684147 -79820406 + AT_rich Low_complexity Low_complexity 1 21 0 1900 100 0 16 chr17 9685706 9685956 -79818597 + AluSc SINE Alu 1 246 -63 21 0 0 0 chr17 9685956 9685977 -79818576 + AT_rich Low_complexity Low_complexity 1 21 0 213 355 97 27 chr17 9686144 9686330 -79818223 + L3 LINE CR1 984 1182 -395 1334 164 35 87 chr17 9686370 9686546 -79818007 + MER58B DNA MER1_type 46 201 -2219 2278 70 3 67 chr17 9686546 9686877 -79817676 - AluY SINE Alu -1 310 1 1334 164 35 87 chr17 9686877 9687012 -79817541 + MER58B DNA MER1_type 201 341 0 478 237 164 13 chr17 9687022 9687174 -79817379 - MER5A DNA MER1_type -2 187 13 2260 88 17 7 chr17 9687264 9687559 -79816994 - AluSg SINE Alu -11 299 2 1818 80 0 36 chr17 9689162 9689412 -79815141 - AluY SINE Alu -15 296 56 373 196 107 0 chr17 9689626 9689738 -79814815 - L1MA8 LINE L1 -3 6288 6165 283 348 63 6 chr17 9690233 9690391 -79814162 + L2 LINE L2 2261 2427 -887 1243 213 115 37 chr17 9690481 9690894 -79813659 + MER66A LTR ERV1 100 448 -30 279 375 46 32 chr17 9690915 9691195 -79813358 + L2 LINE L2 2491 2774 -540 2272 86 0 7 chr17 9691221 9691512 -79813041 + AluSc SINE Alu 1 289 -20 226 313 12 12 chr17 9691682 9691765 -79812788 + L2 LINE L2 3017 3099 -173 454 179 12 0 chr17 9691901 9691985 -79812568 - L1MA10 LINE L1 -32 6302 6218 268 290 110 21 chr17 9692167 9692312 -79812241 - MIR SINE MIR -81 181 24 1068 62 8 0 chr17 9693929 9694059 -79810494 + AluSc SINE Alu 1 131 -178 230 73 24 0 chr17 9694059 9694100 -79810453 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1052 65 0 0 chr17 9694155 9694278 -79810275 + AluSc SINE Alu 1 123 -186 1010 89 0 0 chr17 9694368 9694491 -79810062 + AluSc SINE Alu 1 123 -186 2474 77 0 0 chr17 9694575 9694874 -79809679 + AluY SINE Alu 1 299 -12 1687 182 26 6 chr17 9694887 9695228 -79809325 + L1MB4 LINE L1 5738 6085 -95 1082 269 4 4 chr17 9695373 9695618 -79808935 - AluSq SINE Alu -68 245 1 2331 82 7 0 chr17 9696020 9696313 -79808240 + AluY SINE Alu 4 298 -13 254 275 38 69 chr17 9696654 9696755 -79807798 + MER5B DNA MER1_type 4 102 -76 2247 182 72 115 chr17 9696755 9696902 -79807651 + LTR8A LTR ERV1 1 153 -574 2381 92 0 0 chr17 9696902 9697194 -79807359 - AluSg1 SINE Alu -17 292 1 2247 182 72 115 chr17 9697194 9697805 -79806748 + LTR8A LTR ERV1 153 727 0 254 275 38 69 chr17 9697805 9697834 -79806719 + MER5B DNA MER1_type 102 130 -48 436 183 11 11 chr17 9697880 9697973 -79806580 - MER5B DNA MER1_type -6 172 80 479 221 11 0 chr17 9697973 9698068 -79806485 + MER21B LTR ERV1 1 96 -767 1922 259 77 37 chr17 9698121 9698793 -79805760 + MER21B LTR ERV1 98 796 -67 339 220 22 77 chr17 9698806 9698897 -79805656 - MER5B DNA MER1_type -89 89 4 210 37 0 0 chr17 9699042 9699069 -79805484 + (A)n Simple_repeat Simple_repeat 1 27 0 2405 65 10 0 chr17 9699072 9699363 -79805190 + AluY SINE Alu 1 294 -17 1639 170 13 32 chr17 9699436 9699748 -79804805 - AluJb SINE Alu -4 308 3 651 137 0 73 chr17 9699769 9699893 -79804660 - FLAM_A SINE Alu -18 124 10 251 335 49 27 chr17 9701137 9701322 -79803231 + L2 LINE L2 1755 1943 -1371 182 200 0 0 chr17 9701526 9701561 -79802992 + L2 LINE L2 2607 2641 -673 195 39 0 0 chr17 9701626 9701634 -79802919 + (T)n Simple_repeat Simple_repeat 1 8 -18 2433 76 3 0 chr17 9701634 9701936 -79802617 + AluSp SINE Alu 1 303 -10 195 39 0 0 chr17 9701936 9701953 -79802600 + (T)n Simple_repeat Simple_repeat 7 26 0 264 252 0 107 chr17 9701965 9702068 -79802485 + MER58A DNA MER1_type 27 118 0 2269 157 8 17 chr17 9702109 9702282 -79802271 - L1MB5 LINE L1 -8 6166 5993 1860 131 138 60 chr17 9702282 9702629 -79801924 + MSTA LTR MaLR 1 384 -44 2386 93 0 7 chr17 9702629 9702930 -79801623 - AluSq SINE Alu -14 299 1 1860 131 138 60 chr17 9702930 9702979 -79801574 + MSTA LTR MaLR 384 428 0 2269 157 8 17 chr17 9702979 9703207 -79801346 - L1MB5 LINE L1 -181 5993 5769 467 259 36 0 chr17 9703215 9703327 -79801226 + MER58A DNA MER1_type 108 223 -1 488 306 55 12 chr17 9703384 9703639 -79800914 + L1MC4a LINE L1 5697 5962 -1846 2216 112 0 7 chr17 9703843 9704147 -79800406 - AluSg SINE Alu -8 302 1 2227 116 7 0 chr17 9706523 9706816 -79797737 + AluSg SINE Alu 1 295 -15 2898 211 51 27 chr17 9706821 9707452 -79797101 - MER82 DNA MER2_type -6 647 2 22 0 0 0 chr17 9707547 9707569 -79796984 + AT_rich Low_complexity Low_complexity 1 22 0 2453 236 51 36 chr17 9707603 9707906 -79796647 + L1ME1 LINE L1 5467 5764 -402 2368 75 0 3 chr17 9707906 9708212 -79796341 + AluY SINE Alu 2 306 -5 2453 236 51 36 chr17 9708212 9708463 -79796090 + L1ME1 LINE L1 5764 6035 -131 766 139 0 36 chr17 9708463 9708600 -79795953 + FLAM_A SINE Alu 1 132 -1 2453 236 51 36 chr17 9708600 9708713 -79795840 + L1ME1 LINE L1 6035 6145 -21 2297 94 10 0 chr17 9708714 9709002 -79795551 - AluSx SINE Alu -21 291 1 347 187 135 54 chr17 9709121 9709232 -79795321 - FLAM_A SINE Alu -15 118 1 21 82 0 0 chr17 9709263 9709312 -79795241 + AT_rich Low_complexity Low_complexity 1 49 0 213 377 0 0 chr17 9709566 9709643 -79794910 - L2 LINE L2 -11 3261 3185 21 36 0 0 chr17 9710227 9710255 -79794298 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 9710417 9710438 -79794115 + (GA)n Simple_repeat Simple_repeat 2 22 0 2290 76 3 23 chr17 9711430 9711732 -79792821 - AluSx SINE Alu -16 296 1 2538 82 0 0 chr17 9712114 9712419 -79792134 - AluSx SINE Alu -7 305 1 517 139 13 0 chr17 9712769 9712848 -79791705 - Tigger7 DNA MER2_type 0 2491 2412 1442 181 3 60 chr17 9712851 9713023 -79791530 - Tigger7 DNA MER2_type -284 266 115 2562 40 7 7 chr17 9713023 9713325 -79791228 + AluY SINE Alu 1 302 -9 1442 181 3 60 chr17 9713325 9713434 -79791119 - Tigger7 DNA MER2_type -435 115 1 1785 148 50 7 chr17 9713564 9713841 -79790712 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9713844 9714159 -79790394 + AluSg SINE Alu 1 309 -1 955 278 65 45 chr17 9715606 9715767 -79788786 - MLT1L LTR MaLR -8 607 451 2144 187 49 28 chr17 9715767 9716260 -79788293 - MLT1D LTR MaLR -2 503 1 955 278 65 45 chr17 9716260 9716547 -79788006 - MLT1L LTR MaLR -164 451 150 2409 75 0 0 chr17 9716780 9717073 -79787480 - AluY SINE Alu -18 293 1 468 232 118 63 chr17 9717404 9717453 -79787100 - LTR50 LTR ERVL -1 794 749 2562 53 0 10 chr17 9717453 9717756 -79786797 - AluY SINE Alu -11 300 1 468 232 118 63 chr17 9717756 9718145 -79786408 - LTR50 LTR ERVL -46 749 213 2118 115 0 0 chr17 9718161 9718439 -79786114 - AluY SINE Alu -33 278 1 684 199 70 0 chr17 9718550 9718706 -79785847 - LTR50 LTR ERVL -628 167 1 2345 107 0 0 chr17 9719015 9719323 -79785230 + AluSq SINE Alu 1 308 -5 797 253 5 5 chr17 9719381 9719579 -79784974 + MIR SINE MIR 11 208 -54 3788 112 6 6 chr17 9720242 9720769 -79783784 - MER1A DNA MER1_type 0 527 1 2143 112 0 3 chr17 9721064 9721349 -79783204 + AluSx SINE Alu 1 284 -28 444 256 52 47 chr17 9721791 9721963 -79782590 + MIR SINE MIR 74 246 -16 1948 105 36 39 chr17 9722116 9722250 -79782303 + AluSx SINE Alu 1 134 -178 2442 77 3 3 chr17 9722250 9722549 -79782004 + AluSp SINE Alu 1 299 -14 1948 105 36 39 chr17 9722549 9722719 -79781834 + AluSx SINE Alu 134 304 -8 2329 101 0 0 chr17 9723347 9723645 -79780908 - AluSg SINE Alu -12 298 1 387 319 103 25 chr17 9724387 9724591 -79779962 - MIR SINE MIR -37 225 6 2279 84 0 10 chr17 9724598 9724895 -79779658 - AluSg SINE Alu -16 294 1 228 296 38 32 chr17 9725313 9725499 -79779054 + L2 LINE L2 2493 2679 -635 2005 132 0 33 chr17 9725516 9725820 -79778733 - AluSx SINE Alu -18 294 1 718 144 8 8 chr17 9727279 9727397 -79777156 - FLAM_C SINE Alu -11 122 5 203 263 28 117 chr17 9727534 9727713 -79776840 - L3 LINE CR1 -514 1063 901 2303 80 6 13 chr17 9728939 9729252 -79775301 - AluY SINE Alu 0 311 1 419 224 84 9 chr17 9729296 9729403 -79775150 + L2 LINE L2 3193 3307 -6 2516 74 0 0 chr17 9730780 9731079 -79773474 - AluSx SINE Alu -13 299 1 2368 97 0 0 chr17 9731464 9731762 -79772791 + AluSc SINE Alu 1 298 -11 234 0 0 0 chr17 9731924 9731950 -79772603 + (A)n Simple_repeat Simple_repeat 1 26 0 333 130 13 117 chr17 9733188 9733265 -79771288 + AluY SINE Alu 119 187 -114 3999 173 44 33 chr17 9733366 9733771 -79770782 - L1P LINE L1 -924 5222 4823 2116 119 13 7 chr17 9733771 9734073 -79770480 - AluSx SINE Alu -8 304 1 3999 173 44 33 chr17 9734073 9734176 -79770377 - L1P LINE L1 -1323 4823 4723 2182 128 0 0 chr17 9734176 9734481 -79770072 - AluSx SINE Alu -7 305 1 3999 173 44 33 chr17 9734481 9734880 -79769673 - L1P LINE L1 -1423 4723 4304 671 227 8 105 chr17 9735369 9735616 -79768937 - L2 LINE L2 -5 3308 3086 1739 152 3 44 chr17 9735634 9735930 -79768623 + AluJb SINE Alu 1 284 -28 228 167 71 0 chr17 9736074 9736116 -79768437 + MER5A DNA MER1_type 143 187 -2 369 58 0 0 chr17 9736212 9736264 -79768289 + (GA)n Simple_repeat Simple_repeat 1 52 0 2382 88 0 13 chr17 9736811 9737118 -79767435 - AluSx SINE Alu -9 303 1 232 314 107 25 chr17 9737232 9737353 -79767200 - MIR SINE MIR -78 184 54 1637 148 10 40 chr17 9737630 9737927 -79766626 - AluJo SINE Alu -8 304 17 389 295 74 0 chr17 9738106 9738255 -79766298 - L1ME LINE L1 -334 5787 5628 2170 114 0 0 chr17 9739037 9739317 -79765236 - AluSq SINE Alu -33 280 1 1950 182 88 29 chr17 9739495 9739972 -79764581 + MLT1D LTR MaLR 1 505 0 1295 188 62 90 chr17 9740042 9740575 -79763978 + L1MC5 LINE L1 7408 7925 -36 2201 132 0 7 chr17 9741049 9741359 -79763194 + AluSx SINE Alu 3 310 -2 2258 108 0 0 chr17 9741857 9742144 -79762409 - AluSg SINE Alu -23 287 1 287 244 24 0 chr17 9742183 9742265 -79762288 - MIR SINE MIR -149 113 30 2438 25 0 11 chr17 9743196 9743475 -79761078 + AluY SINE Alu 28 303 -8 1630 157 36 11 chr17 9743764 9744044 -79760509 - AluJo SINE Alu -15 297 11 334 288 86 22 chr17 9744284 9744423 -79760130 + MIR SINE MIR 7 154 -108 296 209 122 43 chr17 9744521 9744636 -79759917 + MIR SINE MIR 89 212 -50 2154 130 0 0 chr17 9745039 9745331 -79759222 - AluSq SINE Alu -21 292 1 1204 83 0 0 chr17 9745520 9745676 -79758877 - AluY SINE Alu 0 311 156 2352 84 0 7 chr17 9745886 9746182 -79758371 - AluSg SINE Alu -16 294 1 236 290 93 19 chr17 9746632 9746739 -79757814 + MIR3 SINE MIR 68 182 -26 335 270 225 19 chr17 9747450 9747717 -79756836 - L1MC4a LINE L1 -1963 5845 5524 2259 122 0 0 chr17 9747719 9748030 -79756523 + AluSx SINE Alu 1 311 -1 1787 156 29 13 chr17 9748037 9748344 -79756209 + AluSx SINE Alu 1 312 0 1443 167 15 0 chr17 9748549 9748812 -79755741 - AluSx SINE Alu -45 267 1 27 73 0 0 chr17 9748935 9748990 -79755563 + AT_rich Low_complexity Low_complexity 1 55 0 1157 196 9 9 chr17 9749017 9749236 -79755317 - MER20 DNA MER1_type 0 219 1 231 67 0 0 chr17 9749632 9749662 -79754891 + HSMAR1 DNA Mariner 1 30 -1257 1215 167 35 129 chr17 9749978 9750296 -79754257 - AluJo SINE Alu -16 296 9 22 35 0 0 chr17 9750306 9750335 -79754218 + AT_rich Low_complexity Low_complexity 1 29 0 43942 31 22 1 chr17 9750343 9756230 -79748323 + L1HS LINE L1 1 6017 -138 27 0 0 0 chr17 9756346 9756373 -79748180 + AT_rich Low_complexity Low_complexity 1 27 0 241 230 0 69 chr17 9756583 9756670 -79747883 - L1MC4a LINE L1 -1878 5930 5850 342 289 0 26 chr17 9757165 9757279 -79747274 + L1ME3A LINE L1 4398 4508 -1638 676 215 0 8 chr17 9757279 9757409 -79747144 - MER44D DNA MER2_type -1 704 576 554 111 127 63 chr17 9757407 9757533 -79747020 - MER44D DNA MER2_type -197 412 9 * 2452 229 83 30 chr17 9757567 9758587 -79745966 + L1ME3A LINE L1 4512 5581 -583 252 139 0 0 chr17 9758628 9758664 -79745889 + L1ME3A LINE L1 5677 5712 -458 2417 66 0 13 chr17 9758664 9758967 -79745586 - AluY SINE Alu -12 299 1 919 185 6 0 chr17 9758978 9759140 -79745413 - FAM SINE Alu -4 45 1 1396 242 106 9 chr17 9759144 9759569 -79744984 + L1ME3A LINE L1 5696 6161 -9 314 322 8 8 chr17 9759581 9759699 -79744854 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 234 0 0 0 chr17 9759718 9759744 -79744809 + (TC)n Simple_repeat Simple_repeat 2 27 0 250 298 0 12 chr17 9760033 9760117 -79744436 + T-rich Low_complexity Low_complexity 1 83 0 2135 74 7 44 chr17 9760384 9760681 -79743872 + AluSg SINE Alu 1 286 -24 788 301 93 23 chr17 9760850 9761321 -79743232 - L1MC4a LINE L1 -1868 5940 5437 1707 134 0 0 chr17 9761541 9761788 -79742765 - AluJo SINE Alu -23 289 43 2684 17 0 0 chr17 9761788 9762077 -79742476 - AluYb8 SINE Alu -12 306 18 2037 106 32 0 chr17 9762105 9762389 -79742164 - AluSq SINE Alu -7 306 14 314 303 121 0 chr17 9762694 9762793 -79741760 - MIR SINE MIR -68 140 30 2545 69 3 0 chr17 9763346 9763651 -79740902 + AluY SINE Alu 1 306 -5 207 225 169 14 chr17 9763778 9763849 -79740704 - MER5B DNA MER1_type 0 178 97 2097 136 0 3 chr17 9763882 9764177 -79740376 + AluSx SINE Alu 1 294 -18 243 79 0 0 chr17 9764196 9764234 -79740319 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2076 188 17 8 chr17 9764391 9764753 -79739800 + MLT1A1 LTR MaLR 1 365 0 955 235 167 48 chr17 9765042 9765502 -79739051 + Tigger8 DNA MER2_type 2 516 -150 183 205 0 0 chr17 9765575 9765614 -79738939 + (TA)n Simple_repeat Simple_repeat 2 40 0 1965 143 30 33 chr17 9765614 9765662 -79738891 - L1MA5 LINE L1 -3 6297 6250 2361 91 0 0 chr17 9765662 9765960 -79738593 - AluY SINE Alu -13 298 1 1965 143 30 33 chr17 9765960 9766274 -79738279 - L1MA5 LINE L1 -50 6250 5936 1904 138 3 7 chr17 9766392 9766675 -79737878 - AluSx SINE Alu -30 282 1 205 308 0 31 chr17 9766770 9766835 -79737718 - L2 LINE L2 0 3313 3251 2348 75 0 7 chr17 9766996 9767291 -79737262 - AluSq SINE Alu -20 293 1 1362 174 114 0 chr17 9767295 9767576 -79736977 - L1MA7 LINE L1 -241 6050 5738 1218 139 32 5 chr17 9767577 9767793 -79736760 + L1MA8 LINE L1 6070 6291 0 2158 101 0 0 chr17 9767796 9768073 -79736480 + AluSc SINE Alu 1 277 -32 551 135 10 0 chr17 9768073 9768169 -79736384 + GA-rich Low_complexity Low_complexity 2 98 0 2103 127 10 0 chr17 9768753 9769052 -79735501 + AluSq SINE Alu 1 302 -11 1259 196 4 21 chr17 9769347 9769587 -79734966 - MER46A DNA MER2_type 0 236 1 2241 114 7 0 chr17 9770006 9770312 -79734241 - AluSp SINE Alu -5 308 1 2089 144 0 3 chr17 9770514 9770812 -79733741 - AluSx SINE Alu -13 299 3 1482 64 0 11 chr17 9770825 9771040 -79733513 - AluYa5 SINE Alu 0 310 98 231 37 0 0 chr17 9771218 9771245 -79733308 - L1P LINE L1 -1513 4633 4607 3983 34 2 0 chr17 9771245 9771693 -79732860 + L1PA4 LINE L1 5704 6152 -3 6611 52 16 4 chr17 9772397 9773209 -79731344 - L1PA7 LINE L1 0 6154 5333 189 0 0 0 chr17 9773353 9773374 -79731179 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2428 81 0 3 chr17 9773470 9773780 -79730773 - AluY SINE Alu -2 309 1 5987 191 45 50 chr17 9773786 9773970 -79730583 + L1MC1 LINE L1 4509 4692 -1641 835 105 0 53 chr17 9773970 9774103 -79730450 + L1PA8 LINE L1 6030 6155 -17 5987 191 45 50 chr17 9774103 9774757 -79729796 + L1MC1 LINE L1 4692 5347 -986 1908 98 68 0 chr17 9774757 9775077 -79729476 + AluSx SINE Alu 1 338 0 5987 191 45 50 chr17 9775077 9775701 -79728852 + L1MC1 LINE L1 5347 5964 -369 2094 105 54 7 chr17 9775701 9775995 -79728558 + AluSc SINE Alu 1 308 -1 5987 191 45 50 chr17 9775995 9776363 -79728190 + L1MC1 LINE L1 5964 6332 -1 1567 178 21 7 chr17 9776373 9776654 -79727899 + AluJo SINE Alu 3 287 -25 180 0 0 0 chr17 9776655 9776675 -79727878 + (CA)n Simple_repeat Simple_repeat 2 21 0 668 294 65 0 chr17 9776716 9776917 -79727636 - MIR SINE MIR -31 231 18 1966 152 0 0 chr17 9777334 9777623 -79726930 + AluSx SINE Alu 1 289 -23 15722 199 31 35 chr17 9778107 9779985 -79724568 + L1MA5A LINE L1 77 1962 -4826 1990 151 0 7 chr17 9779985 9780290 -79724263 - AluSx SINE Alu -9 303 1 15722 199 31 35 chr17 9780290 9780628 -79723925 + L1MA5A LINE L1 1962 2300 -4488 2215 115 0 13 chr17 9780628 9780942 -79723611 + AluSg SINE Alu 1 310 0 15722 199 31 35 chr17 9780942 9784128 -79720425 + L1MA5A LINE L1 2300 5484 -1304 1566 167 72 0 chr17 9784128 9784391 -79720162 - AluSg SINE Alu -15 295 14 15722 199 31 35 chr17 9784391 9784881 -79719672 + L1MA5A LINE L1 5484 5975 -813 656 174 191 0 chr17 9784881 9784996 -79719557 + FLAM_A SINE Alu 1 137 -5 6264 122 23 9 chr17 9785011 9785979 -79718574 + L1MA5A LINE L1 5958 6938 -1 2317 100 3 3 chr17 9785984 9786294 -79718259 + AluSq SINE Alu 1 310 -3 219 69 0 0 chr17 9787172 9787201 -79717352 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1832 158 0 3 chr17 9787201 9787485 -79717068 - AluJo SINE Alu -29 283 1 372 43 0 0 chr17 9787728 9787774 -79716779 + (CA)n Simple_repeat Simple_repeat 1 46 0 216 395 73 24 chr17 9788096 9788220 -79716333 - L2 LINE L2 -16 3256 3127 718 200 86 38 chr17 9788504 9788714 -79715839 + L2 LINE L2 3008 3227 -86 333 300 110 21 chr17 9788887 9789078 -79715475 - MIR3 SINE MIR -50 212 8 905 165 0 0 chr17 9789102 9789235 -79715318 + FLAM_C SINE Alu 1 133 0 271 274 115 61 chr17 9789557 9789948 -79714605 + L2 LINE L2 1750 2161 -1153 2469 66 0 7 chr17 9790017 9790322 -79714231 + AluSg SINE Alu 1 303 -7 507 317 76 79 chr17 9790581 9791567 -79712986 + L2 LINE L2 2229 3259 -13 267 387 20 20 chr17 9792584 9792788 -79711765 - L2 LINE L2 -624 2690 2487 207 69 0 0 chr17 9793009 9793038 -79711515 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 342 240 125 10 chr17 9793046 9793150 -79711403 - L2 LINE L2 -23 3290 3175 1846 58 8 62 chr17 9793846 9794104 -79710449 + AluY SINE Alu 1 244 -67 1594 43 0 5 chr17 9794204 9794392 -79710161 + AluY SINE Alu 25 211 -100 706 97 0 39 chr17 9794392 9794495 -79710058 + L1MB5 LINE L1 6075 6173 -1 252 321 27 0 chr17 9794518 9794630 -79709923 + L1MC/D LINE L1 5797 5911 -1897 370 159 23 0 chr17 9794662 9794750 -79709803 + GA-rich Low_complexity Low_complexity 1 90 0 316 246 45 55 chr17 9795123 9795233 -79709320 + LTR67 LTR ERVL 443 551 -6 1126 289 66 23 chr17 9795308 9795786 -79708767 - L1ME LINE L1 -519 5645 5127 2180 128 0 0 chr17 9795786 9796082 -79708471 - AluSx SINE Alu -16 296 1 1126 289 66 23 chr17 9796082 9796293 -79708260 - L1ME LINE L1 -1037 5127 4927 21 0 0 0 chr17 9796564 9796585 -79707968 + AT_rich Low_complexity Low_complexity 1 21 0 289 335 45 28 chr17 9796607 9796962 -79707591 + L1M4 LINE L1 4390 4750 -1396 368 303 28 14 chr17 9796989 9797131 -79707422 - MER87 LTR ERV1 0 541 398 1051 163 33 23 chr17 9797556 9797754 -79706799 - L1MA9 LINE L1 -1 6311 6109 2279 96 3 10 chr17 9797754 9798067 -79706486 - AluSq SINE Alu -2 311 1 1051 163 33 23 chr17 9798067 9798083 -79706470 - L1MA9 LINE L1 -203 6109 6095 497 125 0 57 chr17 9798084 9798172 -79706381 + L1MB1 LINE L1 5806 5888 -301 439 231 231 8 chr17 9798309 9798439 -79706114 + MER5A DNA MER1_type 24 182 -7 2085 99 0 18 chr17 9798532 9798814 -79705739 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr17 9798814 9798834 -79705719 + (CA)n Simple_repeat Simple_repeat 1 20 0 2317 89 3 10 chr17 9799426 9799740 -79704813 + AluSx SINE Alu 1 312 0 6089 122 14 2 chr17 9800009 9800963 -79703590 - L1PA13 LINE L1 0 6163 5195 488 214 10 10 chr17 9801060 9801163 -79703390 - MER5B DNA MER1_type -1 177 75 926 159 0 41 chr17 9801183 9801224 -79703329 - L1 LINE L1 -2018 4128 4087 2672 137 167 30 chr17 9801224 9801764 -79702789 + LTR18B LTR ERVL 1 614 0 926 159 0 41 chr17 9801764 9801892 -79702661 - L1 LINE L1 -2059 4087 3966 767 74 21 0 chr17 9801919 9802014 -79702539 - AluSp/q SINE Alu -15 298 202 1718 136 4 0 chr17 9802014 9802271 -79702282 + AluSx SINE Alu 50 307 -5 2422 96 3 0 chr17 9802595 9802907 -79701646 + AluSq SINE Alu 1 313 0 520 172 0 0 chr17 9803684 9803771 -79700782 - MER5B DNA MER1_type 0 178 92 250 325 35 9 chr17 9803984 9804098 -79700455 - MLT1K LTR MaLR -364 224 108 2335 98 3 3 chr17 9804175 9804482 -79700071 - AluSp SINE Alu -6 307 1 331 263 45 23 chr17 9804558 9804691 -79699862 - L1MC4a LINE L1 -1916 5892 5757 1893 138 7 7 chr17 9804741 9805032 -79699521 + AluJo SINE Alu 2 292 -20 2847 147 29 27 chr17 9805184 9805325 -79699228 - L1MB8 LINE L1 -15 6163 6024 2267 86 0 25 chr17 9805325 9805639 -79698914 + AluSq SINE Alu 1 306 -7 2847 147 29 27 chr17 9805639 9806013 -79698540 - L1MB8 LINE L1 -154 6024 5647 642 207 59 0 chr17 9806450 9806585 -79697968 + MER5A DNA MER1_type 7 149 -40 2282 114 0 0 chr17 9806594 9806900 -79697653 - AluSx SINE Alu -6 306 1 1647 123 0 0 chr17 9806904 9807140 -79697413 + AluSq SINE Alu 78 313 0 1728 110 8 0 chr17 9808038 9808274 -79696279 - AluSx SINE Alu -13 299 62 22 35 0 0 chr17 9808784 9808813 -79695740 + AT_rich Low_complexity Low_complexity 1 29 0 610 82 20 0 chr17 9809159 9809257 -79695296 + (TA)n Simple_repeat Simple_repeat 1 100 0 392 255 131 56 chr17 9809357 9809624 -79694929 - L1MC4a LINE L1 -375 5746 5460 2071 133 0 3 chr17 9809655 9809948 -79694605 - AluJb SINE Alu -14 298 7 1200 194 15 0 chr17 9810035 9810241 -79694312 - MER58A DNA MER1_type -15 209 1 2212 100 3 0 chr17 9810491 9810782 -79693771 + AluSx SINE Alu 1 292 -20 4058 131 63 44 chr17 9811218 9811511 -79693042 + MER49 LTR ERV1 1 287 -636 2056 109 41 10 chr17 9811511 9811805 -79692748 + AluSx SINE Alu 1 303 -9 4058 131 63 44 chr17 9811805 9812235 -79692318 + MER49 LTR ERV1 287 738 -185 202 74 0 0 chr17 9812235 9812262 -79692291 + (TTTA)n Simple_repeat Simple_repeat 2 100 0 2221 102 0 0 chr17 9812262 9812547 -79692006 - AluSx SINE Alu -1 311 1 321 233 189 0 chr17 9814957 9815047 -79689506 - MIR SINE MIR -57 151 45 2474 63 3 10 chr17 9815519 9815820 -79688733 + AluSp SINE Alu 1 299 -14 21 36 0 0 chr17 9815973 9816001 -79688552 + AT_rich Low_complexity Low_complexity 1 28 0 301 230 81 54 chr17 9816001 9816055 -79688498 - L1ME4a LINE L1 -249 5872 5821 2184 115 3 16 chr17 9816055 9816367 -79688186 - AluSx SINE Alu -4 308 1 301 230 81 54 chr17 9816367 9816460 -79688093 - L1ME4a LINE L1 -300 5821 5721 384 192 0 64 chr17 9816623 9816675 -79687878 - L1ME4a LINE L1 -483 5638 5591 4123 93 9 52 chr17 9816675 9817312 -79687241 - MER4B LTR ERV1 0 610 1 384 192 0 64 chr17 9817312 9817337 -79687216 - L1ME4a LINE L1 -530 5591 5566 181 315 54 45 chr17 9817348 9817459 -79687094 - MIR SINE MIR -55 153 42 2279 94 0 0 chr17 9817648 9817925 -79686628 + AluSg SINE Alu 1 277 -33 182 62 31 0 chr17 9817927 9817959 -79686594 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 286 209 48 38 chr17 9818315 9818420 -79686133 - L1MC5 LINE L1 -58 7903 7798 2330 88 3 7 chr17 9818423 9818717 -79685836 - AluSx SINE Alu -14 298 6 901 102 0 8 chr17 9818736 9818864 -79685689 - AluSg/x SINE Alu -10 302 176 568 206 23 39 chr17 9818959 9819124 -79685429 + MER5B DNA MER1_type 15 189 0 200 176 0 68 chr17 9819808 9819956 -79684597 + (TA)n Simple_repeat Simple_repeat 2 139 0 2259 101 7 3 chr17 9820381 9820689 -79683864 - AluSg SINE Alu -1 309 1 565 251 222 21 chr17 9820907 9821186 -79683367 + L2 LINE L2 2941 3275 -38 750 247 80 13 chr17 9821216 9821455 -79683098 + MIR SINE MIR 2 256 -6 2449 65 3 0 chr17 9821556 9821848 -79682705 + AluY SINE Alu 1 293 -18 294 194 118 91 chr17 9822228 9822369 -79682184 - MER58 DNA MER1_type 0 2420 2284 2171 125 3 0 chr17 9822369 9822664 -79681889 + AluSx SINE Alu 1 296 -16 294 194 118 91 chr17 9822664 9822717 -79681836 - MER58 DNA MER1_type -136 2284 28 451 277 91 29 chr17 9822778 9823052 -79681501 - L1MC4a LINE L1 -1237 6571 6281 * 4751 114 16 57 chr17 9823043 9823547 -79681006 - L1PA13 LINE L1 -2 6161 5701 2369 96 0 0 chr17 9823547 9823850 -79680703 - AluSq SINE Alu -10 303 1 4751 114 16 57 chr17 9823850 9824150 -79680403 - L1PA13 LINE L1 -462 5701 5390 212 229 33 33 chr17 9825938 9825999 -79678554 - MER5A DNA MER1_type -84 105 45 277 279 54 9 chr17 9826313 9826424 -79678129 - L3 LINE CR1 -1119 458 343 4755 112 48 36 chr17 9826879 9827649 -79676904 + MER4E LTR ERV1 1 779 0 810 118 0 8 chr17 9827765 9827884 -79676669 + FLAM_C SINE Alu 1 118 -15 23 0 0 0 chr17 9828042 9828065 -79676488 + AT_rich Low_complexity Low_complexity 1 23 0 16011 140 25 24 chr17 9828244 9830350 -79674203 + Tigger2 DNA MER2_type 28 2129 -589 2208 93 3 7 chr17 9830350 9830639 -79673914 + AluSc SINE Alu 3 290 -19 16011 140 25 24 chr17 9830639 9831157 -79673396 + Tigger2 DNA MER2_type 2129 2659 -59 2394 82 0 3 chr17 9831157 9831462 -79673091 + AluSg SINE Alu 1 304 -6 16011 140 25 24 chr17 9831462 9831523 -79673030 + Tigger2 DNA MER2_type 2659 2718 0 690 217 123 77 chr17 9831535 9831991 -79672562 - HAL1 LINE L1 -167 2340 1864 702 220 52 36 chr17 9832232 9832449 -79672104 - LTR41 LTR ERVL -553 242 1 21 57 0 0 chr17 9832648 9832683 -79671870 + AT_rich Low_complexity Low_complexity 1 35 0 2334 89 0 3 chr17 9832683 9832975 -79671578 + AluSp SINE Alu 1 291 -22 249 33 0 0 chr17 9832979 9833009 -79671544 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 278 281 68 52 chr17 9833497 9833714 -79670839 + MIR SINE MIR 3 224 -38 2430 82 0 7 chr17 9834401 9834706 -79669847 + AluSx SINE Alu 1 303 -9 2478 69 7 0 chr17 9834708 9835014 -79669539 + AluY SINE Alu 1 308 -3 1847 183 0 0 chr17 9835684 9835995 -79668558 - AluSq SINE Alu 0 313 3 2412 102 0 0 chr17 9837570 9837883 -79666670 - AluSq SINE Alu 0 313 1 1546 181 72 3 chr17 9838195 9838488 -79666065 + MER39 LTR ERV1 1 313 -394 459 172 21 0 chr17 9838488 9838581 -79665972 + FLAM_C SINE Alu 49 143 0 358 218 13 13 chr17 9838581 9838659 -79665894 + GA-rich Low_complexity Low_complexity 1 78 0 732 120 14 21 chr17 9838661 9838803 -79665750 + (GGAA)n Simple_repeat Simple_repeat 3 143 0 1122 157 6 0 chr17 9838804 9838976 -79665577 + AluJb SINE Alu 129 301 -11 1615 130 8 15 chr17 9838976 9839238 -79665315 + MER39 LTR ERV1 307 566 -141 672 92 49 37 chr17 9839239 9839403 -79665150 + CT-rich Low_complexity Low_complexity 4 169 0 213 57 0 94 chr17 9839414 9839467 -79665086 + (TTCTCC)n Simple_repeat Simple_repeat 4 51 0 2430 82 10 0 chr17 9839468 9839773 -79664780 - AluSp SINE Alu -5 308 1 835 200 7 7 chr17 9839774 9839929 -79664624 + MER39 LTR ERV1 553 707 0 440 275 87 115 chr17 9840083 9840229 -79664324 - LTR67 LTR ERVL 0 557 408 2031 145 30 0 chr17 9840229 9840526 -79664027 + AluJb SINE Alu 1 306 -6 440 275 87 115 chr17 9840526 9840918 -79663635 - LTR67 LTR ERVL -149 408 34 870 225 6 11 chr17 9841021 9841199 -79663354 - MER45A DNA AcHobo 0 178 2 974 148 0 7 chr17 9841381 9841530 -79663023 - Tigger5 DNA MER2_type 0 2323 2176 2566 40 0 0 chr17 9841630 9841926 -79662627 + AluY SINE Alu 16 311 0 386 286 41 7 chr17 9841944 9842091 -79662462 - L1ME4a LINE L1 -259 5862 5711 883 254 152 55 chr17 9842099 9842481 -79662072 - LTR41 LTR ERVL -9 764 346 1470 186 0 58 chr17 9842654 9842816 -79661737 - AluJo SINE Alu -19 293 156 2379 77 0 10 chr17 9842816 9843116 -79661437 - AluY SINE Alu -14 297 1 1470 186 0 58 chr17 9843116 9843264 -79661289 - AluJo SINE Alu -156 156 1 392 183 0 0 chr17 9843264 9843335 -79661218 - LTR41 LTR ERVL -702 71 1 255 309 21 0 chr17 9843342 9843439 -79661114 - L1ME4a LINE L1 -410 5711 5613 21 36 0 0 chr17 9843592 9843620 -79660933 + AT_rich Low_complexity Low_complexity 1 28 0 220 338 146 20 chr17 9844935 9845149 -79659404 - MIR3 SINE MIR -12 250 12 2118 106 21 3 chr17 9845269 9845553 -79659000 + AluSg SINE Alu 5 293 -17 2229 110 0 3 chr17 9845942 9846243 -79658310 + AluSg SINE Alu 1 300 -10 371 189 0 0 chr17 9846539 9846613 -79657940 + MER5B DNA MER1_type 2 75 -103 200 176 0 39 chr17 9846613 9846664 -79657889 + T-rich Low_complexity Low_complexity 2 50 0 1922 187 19 83 chr17 9846689 9846753 -79657800 - MLT1D LTR MaLR 0 505 438 2259 98 0 0 chr17 9846753 9847038 -79657515 + AluSx SINE Alu 1 285 -27 234 0 9 0 chr17 9847038 9847108 -79657445 + (CA)n Simple_repeat Simple_repeat 2 27 0 249 33 0 0 chr17 9847107 9847137 -79657416 + (TC)n Simple_repeat Simple_repeat 2 31 0 1922 187 19 83 chr17 9847108 9847586 -79656967 - MLT1D LTR MaLR -65 440 1 2368 92 3 0 chr17 9847590 9847885 -79656668 - AluSq SINE Alu -17 296 1 450 210 0 10 chr17 9847902 9848002 -79656551 + MER5B DNA MER1_type 80 178 0 1585 170 0 28 chr17 9849078 9849360 -79655193 - AluJb SINE Alu -37 275 2 875 219 136 24 chr17 9849547 9849798 -79654755 - L1MC4 LINE L1 -1037 7005 6727 530 234 226 13 chr17 9849810 9850045 -79654508 - HAL1 LINE L1 -1018 1489 1205 2310 108 0 0 chr17 9850046 9850334 -79654219 + AluSx SINE Alu 3 290 -22 254 313 67 13 chr17 9850377 9850527 -79654026 - L1M4 LINE L1 -1880 4266 4109 352 293 14 33 chr17 9850614 9850829 -79653724 - L1M4 LINE L1 -2248 3898 3688 2399 41 41 0 chr17 9851262 9851552 -79653001 - AluY SINE Alu -9 302 1 201 179 60 45 chr17 9852223 9852290 -79652263 + L3 LINE CR1 1296 1363 -214 506 63 13 0 chr17 9853285 9853364 -79651189 + (TA)n Simple_repeat Simple_repeat 2 81 0 2091 117 38 0 chr17 9853374 9853665 -79650888 + AluSx SINE Alu 1 302 -10 232 115 0 135 chr17 9854173 9854192 -79650361 - Alu SINE Alu -157 151 131 2508 67 0 0 chr17 9854192 9854490 -79650063 - AluY SINE Alu -13 298 1 232 115 0 135 chr17 9854490 9854522 -79650031 - Alu SINE Alu -177 131 107 2537 82 0 0 chr17 9855179 9855482 -79649071 - AluSx SINE Alu -9 303 1 2093 124 10 26 chr17 9856095 9856402 -79648151 - AluSx SINE Alu -10 302 1 2414 91 0 7 chr17 9856653 9856962 -79647591 - AluSg SINE Alu -3 307 1 27 0 0 0 chr17 9856964 9856991 -79647562 + AT_rich Low_complexity Low_complexity 1 27 0 2138 123 3 0 chr17 9857027 9857342 -79647211 - AluSg SINE Alu 0 310 1 2284 78 0 0 chr17 9857567 9857849 -79646704 - AluY SINE Alu -3 308 27 357 292 167 16 chr17 9858017 9858209 -79646344 - HAL1 LINE L1 -586 1921 1701 256 293 171 29 chr17 9858554 9858694 -79645859 - MIR3 SINE MIR -28 180 21 2258 90 0 3 chr17 9859038 9859326 -79645227 + AluSx SINE Alu 1 287 -25 2349 86 0 10 chr17 9859908 9860209 -79644344 - AluY SINE Alu -13 298 1 211 219 0 0 chr17 9860907 9860948 -79643605 - MER5B DNA MER1_type -137 41 1 2087 100 7 42 chr17 9861317 9861627 -79642926 + AluSx SINE Alu 3 301 -11 390 270 158 13 chr17 9862029 9862181 -79642372 + MER5A DNA MER1_type 10 183 -6 2361 60 7 0 chr17 9862206 9862522 -79642031 - AluY SINE Alu 0 318 1 2216 121 3 13 chr17 9862526 9862841 -79641712 - AluSx SINE Alu 0 312 1 233 315 47 24 chr17 9862907 9863034 -79641519 - MER5B DNA MER1_type -48 130 1 233 260 301 7 chr17 9863086 9863232 -79641321 - MIR SINE MIR -24 238 50 387 293 45 57 chr17 9866870 9867027 -79637526 - L2 LINE L2 -1 3271 3117 383 260 130 21 chr17 9867513 9867705 -79636848 - MLT1J2 LTR MaLR -234 216 4 2283 83 7 20 chr17 9867870 9868170 -79636383 + AluSq SINE Alu 1 296 -17 427 310 114 41 chr17 9868429 9868719 -79635834 - MLT1L LTR MaLR -5 610 300 1184 283 85 37 chr17 9868788 9869189 -79635364 - L1MC4a LINE L1 -1750 6058 5621 2695 50 0 0 chr17 9869189 9869492 -79635061 + AluY SINE Alu 5 307 -4 1184 283 85 37 chr17 9869492 9869652 -79634901 - L1MC4a LINE L1 -2187 5621 5470 296 299 130 54 chr17 9869739 9870119 -79634434 - L1MC4a LINE L1 -1071 5075 4644 2296 90 3 3 chr17 9870119 9870408 -79634145 - AluSc SINE Alu -20 289 1 296 299 130 54 chr17 9870408 9870542 -79634011 - L1MC4a LINE L1 -1502 4644 4522 279 0 0 0 chr17 9870550 9870581 -79633972 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 276 279 72 53 chr17 9870916 9871124 -79633429 - MLT1L LTR MaLR -398 217 6 2296 244 89 64 chr17 9871592 9871756 -79632797 + L1MC4a LINE L1 4993 5151 -995 2589 43 0 10 chr17 9871756 9872058 -79632495 + AluY SINE Alu 1 299 -12 2296 244 89 64 chr17 9872058 9872771 -79631782 + L1MC4a LINE L1 5151 5098 -1048 2333 78 0 3 chr17 9872771 9873118 -79631435 - AluSq SINE Alu 0 346 1 2296 244 89 64 chr17 9873118 9873429 -79631124 + L1MC4a LINE L1 5097 5399 -747 873 152 49 0 chr17 9873463 9873627 -79630926 + L1P LINE L1 3726 3897 -2249 304 247 0 0 chr17 9874082 9874159 -79630394 - L1PB4 LINE L1 -2 6154 6078 2241 120 0 0 chr17 9874198 9874498 -79630055 + AluSg SINE Alu 1 300 -10 2141 129 0 3 chr17 9874734 9875036 -79629517 - AluSg SINE Alu -9 301 1 854 119 0 0 chr17 9875518 9875636 -79628917 - AluSq/x SINE Alu -195 118 1 208 230 11 103 chr17 9875944 9876031 -79628522 + L2 LINE L2 3186 3264 -8 2395 77 0 7 chr17 9876302 9876602 -79627951 - AluSc SINE Alu -11 298 1 26 0 0 0 chr17 9876873 9876899 -79627654 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr17 9876938 9876982 -79627571 + AT_rich Low_complexity Low_complexity 1 44 0 2352 89 3 7 chr17 9877231 9877534 -79627019 + AluSx SINE Alu 1 302 -10 714 203 0 0 chr17 9877624 9877747 -79626806 + FLAM_C SINE Alu 2 124 -9 2010 222 13 57 chr17 9877804 9878167 -79626386 - L1ME1 LINE L1 -5 6230 5902 2376 91 3 10 chr17 9878167 9878474 -79626079 - AluSq SINE Alu -8 305 1 2010 222 13 57 chr17 9878474 9878710 -79625843 - L1ME1 LINE L1 -333 5902 5657 1842 162 74 16 chr17 9878721 9879098 -79625455 - L1MA8 LINE L1 -5 6286 5888 1277 132 55 9 chr17 9879087 9879306 -79625247 - L1MA8 LINE L1 -633 5658 5430 * 2355 81 14 0 chr17 9879308 9879603 -79624950 - AluY SINE Alu -12 299 1 2110 98 44 0 chr17 9879605 9879880 -79624673 - AluSx SINE Alu -19 293 7 1427 232 124 25 chr17 9879880 9880271 -79624282 - L1ME1 LINE L1 -1307 4908 4452 2322 82 7 10 chr17 9880271 9880574 -79623979 - AluY SINE Alu -9 302 1 1427 232 124 25 chr17 9880574 9880699 -79623854 - L1ME1 LINE L1 -1763 4452 4341 1410 206 61 43 chr17 9880709 9881102 -79623451 - L1ME1 LINE L1 -5968 428 29 2263 91 7 3 chr17 9881597 9881895 -79622658 + AluSc SINE Alu 1 299 -10 2025 87 4 0 chr17 9882574 9882826 -79621727 - AluSx SINE Alu -59 253 1 603 216 102 41 chr17 9882826 9883249 -79621304 - HAL1b LINE L1 -318 1030 531 2403 100 0 0 chr17 9883249 9883550 -79621003 - AluSx SINE Alu -11 301 1 603 216 102 41 chr17 9883550 9883657 -79620896 - HAL1b LINE L1 -817 531 432 515 222 7 42 chr17 9884413 9884557 -79619996 - MER5A DNA MER1_type -25 164 26 499 150 0 70 chr17 9884764 9884864 -79619689 + AluJo SINE Alu 69 161 -151 1220 185 15 102 chr17 9884887 9885212 -79619341 + AluJo SINE Alu 1 297 -15 4713 76 136 57 chr17 9885634 9886400 -79618153 - LTR12 LTR ERV1 0 826 1 492 314 52 16 chr17 9886559 9886750 -79617803 + MIR SINE MIR 8 205 -57 216 208 0 0 chr17 9886750 9886791 -79617762 + (TA)n Simple_repeat Simple_repeat 2 45 -9 361 82 262 0 chr17 9886791 9886852 -79617701 + MADE1 DNA Mariner 4 80 0 216 208 0 0 chr17 9886852 9886863 -79617690 + (TA)n Simple_repeat Simple_repeat 44 54 0 23 33 0 0 chr17 9887308 9887338 -79617215 + AT_rich Low_complexity Low_complexity 1 30 0 2420 92 3 3 chr17 9887427 9887731 -79616822 - AluSx SINE Alu -8 304 1 535 99 0 0 chr17 9888132 9888203 -79616350 + AluS SINE Alu 2 72 -241 540 200 17 8 chr17 9888305 9888425 -79616128 - MIR SINE MIR -90 172 52 2385 94 0 0 chr17 9888803 9889100 -79615453 - AluSg SINE Alu -13 297 1 369 288 114 8 chr17 9889220 9889352 -79615201 + MIR SINE MIR 3 148 -114 3640 139 70 23 chr17 9891155 9891312 -79613241 + MER39 LTR ERV1 1 149 -558 2340 93 7 3 chr17 9891312 9891614 -79612939 - AluSg SINE Alu -7 303 1 3640 139 70 23 chr17 9891614 9892067 -79612486 + MER39 LTR ERV1 149 640 -67 1377 135 64 8 chr17 9892061 9892391 -79612162 - MER39 LTR ERV1 -295 412 2 * 403 273 88 67 chr17 9892393 9892734 -79611819 - LTR33 LTR ERVL -127 394 47 2206 89 7 0 chr17 9892896 9893212 -79611341 - AluSg SINE Alu 0 319 2 1881 128 0 51 chr17 9893273 9893589 -79610964 - AluSx SINE Alu 0 301 1 1485 176 66 4 chr17 9893741 9894014 -79610539 - Tigger3(Golem) DNA MER2_type -10 3019 2730 2369 105 0 0 chr17 9894014 9894318 -79610235 + AluSg SINE Alu 1 304 -6 301 262 0 0 chr17 9894352 9894413 -79610140 - Tigger3(Golem) DNA MER2_type -2956 73 13 1644 148 48 90 chr17 9894448 9894666 -79609887 - MER47A DNA MER2_type -1958 365 168 2350 74 3 0 chr17 9894666 9894951 -79609602 + AluSg SINE Alu 1 286 -24 1644 148 48 90 chr17 9894951 9895109 -79609444 - MER47A DNA MER2_type -2155 168 5 186 43 0 0 chr17 9895109 9895132 -79609421 + (TA)n Simple_repeat Simple_repeat 2 24 0 479 291 67 22 chr17 9895246 9895403 -79609150 - L1MC/D LINE L1 -2211 5597 5430 453 152 13 0 chr17 9895403 9895482 -79609071 - MER116 DNA Mariner 0 80 1 479 291 67 22 chr17 9895482 9895503 -79609050 - L1MC/D LINE L1 -2378 5430 5411 2116 68 62 52 chr17 9895520 9895829 -79608724 - AluSp SINE Alu -1 312 1 436 265 74 55 chr17 9895834 9896339 -79608214 - L1MC/D LINE L1 -750 5396 4900 192 77 0 0 chr17 9896579 9896605 -79607948 + (CA)n Simple_repeat Simple_repeat 2 27 0 2401 72 3 0 chr17 9896752 9897042 -79607511 - AluSc SINE Alu -15 294 4 870 218 16 73 chr17 9897060 9897308 -79607245 - L1ME1 LINE L1 0 6166 5933 427 303 99 68 chr17 9897647 9898268 -79606285 + L1M4 LINE L1 3144 3744 -2402 2273 65 10 39 chr17 9898268 9898604 -79605949 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9898604 9898925 -79605628 + L1M4 LINE L1 3744 4054 -2092 2450 84 7 0 chr17 9898925 9899234 -79605319 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9899234 9899562 -79604991 + L1M4 LINE L1 4054 4472 -1674 2472 84 3 0 chr17 9899696 9900007 -79604546 - AluSp SINE Alu -1 312 1 2485 67 3 3 chr17 9900317 9900617 -79603936 + AluY SINE Alu 3 302 -9 2286 99 0 0 chr17 9901204 9901527 -79603026 - AluSq SINE Alu 0 323 1 1218 170 4 39 chr17 9902242 9902471 -79602082 - AluJo SINE Alu -91 221 1 189 205 26 0 chr17 9902471 9902510 -79602043 - L2 LINE L2 -12 3260 3221 246 62 0 0 chr17 9902783 9902815 -79601738 + (T)n Simple_repeat Simple_repeat 1 32 0 266 340 21 21 chr17 9902914 9903055 -79601498 - MIR SINE MIR 0 262 122 333 221 26 0 chr17 9903138 9903215 -79601338 - MIR SINE MIR -128 134 56 1390 136 47 101 chr17 9903541 9903858 -79600695 - AluSq SINE Alu -13 300 1 2423 66 0 0 chr17 9903860 9904148 -79600405 - AluY SINE Alu -23 288 1 1195 82 0 7 chr17 9904148 9904294 -79600259 - AluSq/x SINE Alu -167 145 1 2044 108 7 4 chr17 9904315 9904594 -79599959 - AluSg SINE Alu -30 280 1 194 327 159 9 chr17 9904646 9904759 -79599794 - L2 LINE L2 -10 3262 3133 1675 164 39 96 chr17 9904953 9905361 -79599192 - MLT1B LTR MaLR -3 387 3 2420 63 0 13 chr17 9905992 9906291 -79598262 + AluY SINE Alu 1 295 -16 406 324 54 14 chr17 9906697 9906919 -79597634 + MIR SINE MIR 32 262 0 1768 150 34 7 chr17 9908596 9908889 -79595664 - AluJb SINE Alu -11 301 1 3385 280 78 58 chr17 9909780 9910254 -79594299 - HAL1 LINE L1 -11 2496 2033 1764 71 0 18 chr17 9910254 9910480 -79594073 - AluY SINE Alu -7 304 83 3385 280 78 58 chr17 9910480 9911350 -79593203 - HAL1 LINE L1 -474 2033 1182 2433 43 0 3 chr17 9911350 9911677 -79592876 - AluY SINE Alu 0 326 1 3385 280 78 58 chr17 9911677 9911897 -79592656 - HAL1 LINE L1 -1325 1182 968 219 103 0 0 chr17 9911897 9911936 -79592617 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3385 280 78 58 chr17 9911936 9912009 -79592544 - HAL1 LINE L1 -1539 968 898 2191 112 7 0 chr17 9912009 9912304 -79592249 + AluSc SINE Alu 1 297 -12 3385 280 78 58 chr17 9912304 9912797 -79591756 - HAL1 LINE L1 -1609 898 317 297 188 40 114 chr17 9912822 9912971 -79591582 - HAL1 LINE L1 -2276 231 94 344 321 49 6 chr17 9913074 9913236 -79591317 - MIR SINE MIR -87 175 7 300 283 0 28 chr17 9914751 9914857 -79589696 + MER5A DNA MER1_type 36 138 -51 285 270 10 40 chr17 9914932 9915032 -79589521 - MER5A DNA MER1_type -25 164 68 2325 104 3 0 chr17 9916488 9916786 -79587767 - AluSg SINE Alu -1 309 11 2194 99 0 7 chr17 9917623 9917927 -79586626 + AluY SINE Alu 1 302 0 2316 100 0 0 chr17 9918124 9918405 -79586148 - AluSx SINE Alu -31 281 1 518 371 62 6 chr17 9918599 9918952 -79585601 + L2 LINE L2 2333 2705 -609 247 269 45 0 chr17 9919189 9919256 -79585297 + MIR SINE MIR 100 169 -93 479 335 65 52 chr17 9919291 9919488 -79585065 - L1M4 LINE L1 -1555 4591 4398 2058 127 24 0 chr17 9919488 9919779 -79584774 - AluSq SINE Alu -15 298 1 479 335 65 52 chr17 9919779 9919812 -79584741 - L1M4 LINE L1 -1748 4398 4367 1685 167 52 14 chr17 9919812 9920100 -79584453 - AluJb SINE Alu -9 303 5 479 335 65 52 chr17 9920100 9920268 -79584285 - L1M4 LINE L1 -1779 4367 4187 306 320 22 108 chr17 9920572 9920670 -79583883 + MIR SINE MIR 48 153 -109 2110 78 27 96 chr17 9920670 9921002 -79583551 + AluSq SINE Alu 1 309 -4 306 320 22 108 chr17 9921002 9921134 -79583419 + MIR SINE MIR 153 258 -4 593 323 149 28 chr17 9921353 9921585 -79582968 + L2 LINE L2 2251 2454 -859 2355 95 3 7 chr17 9921585 9921891 -79582662 - AluSp SINE Alu -8 305 1 593 323 149 28 chr17 9921891 9922570 -79581983 + L2 LINE L2 2454 3282 -31 1088 168 0 6 chr17 9922945 9923118 -79581435 + FAM SINE Alu 1 172 -3 2427 93 0 6 chr17 9923121 9923432 -79581121 + AluSg SINE Alu 1 309 -1 2383 114 0 0 chr17 9924161 9924469 -79580084 - AluSg SINE Alu -2 308 1 262 254 127 0 chr17 9924469 9924540 -79580013 - MIR SINE MIR -111 151 72 2571 84 3 0 chr17 9925006 9925316 -79579237 + AluSx SINE Alu 1 311 -1 2288 71 0 40 chr17 9925340 9925674 -79578879 - AluY SINE Alu 0 322 1 210 221 81 47 chr17 9926755 9926841 -79577712 - MIR SINE MIR -17 245 157 228 282 176 0 chr17 9928207 9928280 -79576273 - MER5A DNA MER1_type -14 175 116 2514 85 0 0 chr17 9928280 9928587 -79575966 - AluSc SINE Alu -2 307 1 2203 125 3 0 chr17 9928590 9928885 -79575668 - AluSx SINE Alu -16 296 1 228 282 176 0 chr17 9928885 9928949 -79575604 - MER5A DNA MER1_type -74 115 9 210 118 0 0 chr17 9929368 9929402 -79575151 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 339 179 0 0 chr17 9929404 9929460 -79575093 - L2 LINE L2 -9 3304 3249 2330 67 3 35 chr17 9929503 9929815 -79574738 + AluY SINE Alu 1 302 -9 2684 47 0 0 chr17 9930850 9931151 -79573402 - AluY SINE Alu -10 301 1 2389 98 0 7 chr17 9932042 9932348 -79572205 - AluSq SINE Alu -7 306 3 241 363 166 14 chr17 9932706 9932929 -79571624 - MIR SINE MIR -2 260 4 476 202 31 175 chr17 9934148 9934371 -79570182 + L2 LINE L2 3118 3308 -5 2028 154 0 16 chr17 9934913 9935225 -79569328 - AluJo SINE Alu -5 307 1 1168 238 94 49 chr17 9935419 9935452 -79569101 - MLT1G1 LTR MaLR -2 588 558 1841 180 0 0 chr17 9935452 9935747 -79568806 + AluJo SINE Alu 1 295 -17 1168 238 94 49 chr17 9935747 9936261 -79568292 - MLT1G1 LTR MaLR -32 558 9 769 244 76 2 chr17 9936269 9936544 -79568009 + L1MC4a LINE L1 5587 5819 -302 2313 64 4 11 chr17 9936576 9936856 -79567697 - AluSp SINE Alu -29 284 7 376 123 0 0 chr17 9936867 9936924 -79567629 - Alu SINE Alu -3 299 243 2307 96 23 0 chr17 9937184 9937486 -79567067 + AluSc SINE Alu 1 309 0 2366 80 0 0 chr17 9939399 9939715 -79564838 - AluSx SINE Alu 0 316 1 1294 168 0 10 chr17 9939723 9939932 -79564621 - AluJo SINE Alu -19 293 87 820 145 0 48 chr17 9939974 9940119 -79564434 - FLAM_C SINE Alu -3 140 3 216 214 0 0 chr17 9940121 9940163 -79564390 + (TTA)n Simple_repeat Simple_repeat 2 43 0 397 333 86 14 chr17 9940768 9940990 -79563563 - MIR SINE MIR -23 239 2 2269 118 0 3 chr17 9942045 9942351 -79562202 - AluSx SINE Alu -7 305 1 620 265 38 19 chr17 9943427 9943638 -79560915 + L1MC5 LINE L1 7710 7924 -37 414 359 82 5 chr17 9943832 9944027 -79560526 + MIR SINE MIR 44 253 -9 2311 95 0 0 chr17 9944466 9944812 -79559741 - AluSx SINE Alu 0 346 1 310 293 136 68 chr17 9945238 9945361 -79559192 - L2 LINE L2 -38 3234 3121 2335 83 24 0 chr17 9945361 9945649 -79558904 + AluSq SINE Alu 1 295 -18 310 293 136 68 chr17 9945649 9945819 -79558734 - L2 LINE L2 -151 3121 2921 339 351 106 0 chr17 9945909 9946060 -79558493 - L2 LINE L2 -494 2820 2654 213 121 0 0 chr17 9946739 9946772 -79557781 + (CA)n Simple_repeat Simple_repeat 1 33 0 333 0 0 0 chr17 9946812 9946849 -79557704 + (CA)n Simple_repeat Simple_repeat 1 37 0 388 268 24 65 chr17 9946860 9947028 -79557525 + L1MEd LINE L1 46 206 -5913 641 261 103 0 chr17 9947054 9947249 -79557304 - MER58C DNA MER1_type 0 215 1 2393 83 0 37 chr17 9947415 9947599 -79556954 - AluSq SINE Alu 0 313 145 2579 54 0 0 chr17 9947599 9947894 -79556659 - AluY SINE Alu -16 295 1 2393 83 0 37 chr17 9947894 9948034 -79556519 - AluSq SINE Alu -168 145 1 1121 78 0 0 chr17 9948046 9948175 -79556378 - AluSq/x SINE Alu -184 129 1 574 296 0 18 chr17 9948271 9948440 -79556113 + Charlie4 DNA MER1_type 12 177 -1784 189 250 0 0 chr17 9948628 9948664 -79555889 + MIR SINE MIR 219 254 -8 2380 93 0 10 chr17 9949623 9949934 -79554619 + AluSx SINE Alu 1 308 -4 261 268 188 22 chr17 9950349 9950487 -79554066 - MARNA DNA Mariner -149 437 277 551 294 130 4 chr17 9951033 9951264 -79553289 - MLT1I LTR MaLR -149 260 1 358 322 46 7 chr17 9951264 9951416 -79553137 + MIR SINE MIR 70 227 -35 2016 95 4 0 chr17 9951439 9951691 -79552862 + AluSp SINE Alu 45 297 -16 323 243 14 0 chr17 9952493 9952563 -79551990 + MIR SINE MIR 50 120 -88 1820 85 0 4 chr17 9953420 9953655 -79550898 + AluSg/x SINE Alu 72 305 -7 411 264 193 35 chr17 9958185 9958382 -79546171 + MIR SINE MIR 23 250 -12 24 32 0 0 chr17 9959847 9959878 -79544675 + GC_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr17 9959923 9959969 -79544584 + GC_rich Low_complexity Low_complexity 1 46 0 207 0 0 0 chr17 9960055 9960078 -79544475 + (CCCG)n Simple_repeat Simple_repeat 4 26 0 618 209 78 7 chr17 9961104 9961257 -79543296 - MER5A DNA MER1_type -6 183 20 437 141 26 0 chr17 9961335 9961413 -79543140 + MER103 DNA DNA 8 87 -79 1736 118 54 98 chr17 9962543 9962951 -79541602 + MLT1B LTR MaLR 1 390 0 1696 208 3 55 chr17 9963905 9964054 -79540499 + MLT1A1 LTR MaLR 7 162 -203 1597 101 187 30 chr17 9964054 9964321 -79540232 + AluSg1 SINE Alu 1 309 0 1696 208 3 55 chr17 9964321 9964550 -79540003 + MLT1A1 LTR MaLR 162 365 0 2513 78 0 6 chr17 9964792 9965107 -79539446 + AluSq SINE Alu 1 306 -7 262 241 9 111 chr17 9969059 9969167 -79535386 + MIR3 SINE MIR 89 185 -23 224 337 92 0 chr17 9970583 9970681 -79533872 + MIR SINE MIR 86 192 -70 476 261 0 0 chr17 9970872 9971052 -79533501 + (CA)n Simple_repeat Simple_repeat 1 180 0 384 211 0 0 chr17 9971094 9971236 -79533317 + (CA)n Simple_repeat Simple_repeat 1 142 0 399 300 70 70 chr17 9971664 9972061 -79532492 + L2 LINE L2 2866 3262 -10 283 211 31 31 chr17 9972106 9972234 -79532319 + (TG)n Simple_repeat Simple_repeat 2 129 0 301 149 28 50 chr17 9972248 9972429 -79532124 + (TG)n Simple_repeat Simple_repeat 1 177 0 431 106 21 50 chr17 9972455 9972596 -79531957 + (TG)n Simple_repeat Simple_repeat 1 137 0 323 138 38 46 chr17 9972627 9972898 -79531655 + (TG)n Simple_repeat Simple_repeat 1 268 0 318 219 12 24 chr17 9973725 9973807 -79530746 - MIR3 SINE MIR -54 154 74 1869 107 27 4 chr17 9974781 9975043 -79529510 - AluSg SINE Alu -9 301 34 182 259 37 0 chr17 9975464 9975518 -79529035 + MIR SINE MIR 65 120 -88 2126 119 0 16 chr17 9976484 9976787 -79527766 - AluSx SINE Alu -14 298 1 257 297 0 0 chr17 9977566 9977630 -79526923 - MIR SINE MIR -112 150 87 287 343 28 0 chr17 9978456 9978564 -79525989 - MIR3 SINE MIR -49 159 49 449 308 38 19 chr17 9979743 9979932 -79524621 - MIR SINE MIR -40 222 32 315 204 187 12 chr17 9981728 9981855 -79522698 - MIR SINE MIR -62 146 16 502 231 17 8 chr17 9981870 9981987 -79522566 - MER5B DNA MER1_type -58 120 3 198 0 0 0 chr17 9982180 9982202 -79522351 + (T)n Simple_repeat Simple_repeat 1 22 0 2125 112 0 16 chr17 9982993 9983296 -79521257 - AluSg SINE Alu -12 298 1 484 250 2 51 chr17 9983493 9983671 -79520882 - MER58B DNA MER1_type 0 341 169 340 323 80 73 chr17 9983703 9983802 -79520751 + HAL1 LINE L1 1114 1211 -1296 1344 170 76 55 chr17 9983802 9984091 -79520462 + AluJo SINE Alu 1 295 -17 340 323 80 73 chr17 9984091 9984279 -79520274 + HAL1 LINE L1 1211 1403 -1104 614 293 22 31 chr17 9984280 9984614 -79519939 + HAL1b LINE L1 427 706 -642 402 21 0 0 chr17 9984759 9984806 -79519747 + (TG)n Simple_repeat Simple_repeat 2 48 0 688 316 105 69 chr17 9984809 9985225 -79519328 + L1ME LINE L1 1856 2255 -3960 2315 79 0 0 chr17 9985225 9985516 -79519037 - AluY SINE Alu -20 291 1 688 316 105 69 chr17 9985516 9986362 -79518191 + L1ME LINE L1 2255 3829 -2386 233 247 13 0 chr17 9986367 9986444 -79518109 + MER116 DNA Mariner 1 78 -2 264 271 105 30 chr17 9988109 9988343 -79516210 + L1ME LINE L1 5290 5541 -649 312 336 15 37 chr17 9988354 9988488 -79516065 + L1ME LINE L1 5589 5719 -471 241 335 159 6 chr17 9988779 9988961 -79515592 - L2 LINE L2 -339 2975 2766 2206 106 3 0 chr17 9989121 9989423 -79515130 - AluSx SINE Alu 0 312 10 339 169 0 0 chr17 9989589 9989660 -79514893 + (TG)n Simple_repeat Simple_repeat 1 71 0 552 323 74 2 chr17 9989708 9990032 -79514521 - L2 LINE L2 -225 3088 2740 2170 100 0 0 chr17 9991805 9992105 -79512448 - AluSg SINE Alu 0 300 1 415 293 28 29 chr17 9992432 9992631 -79511922 + MIR SINE MIR 16 216 -46 270 327 63 25 chr17 9992655 9992814 -79511739 + MARNA DNA Mariner 189 353 -233 393 248 261 13 chr17 9992817 9992970 -79511583 + L2 LINE L2 3119 3309 -4 1700 184 17 0 chr17 9994418 9994711 -79509842 - AluJo SINE Alu -14 298 1 229 111 0 0 chr17 9995198 9995234 -79509319 - MER117 DNA MER1_type -49 148 113 1906 138 17 3 chr17 9995474 9995770 -79508783 + AluSq SINE Alu 13 312 -1 320 133 17 0 chr17 9995773 9995833 -79508720 + GA-rich Low_complexity Low_complexity 2 62 0 393 22 0 0 chr17 9995834 9995880 -79508673 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 253 275 161 55 chr17 9995987 9996205 -79508348 - L3 LINE CR1 -214 1363 1123 2199 111 0 13 chr17 9996224 9996540 -79508013 - AluSx SINE Alu 0 312 1 2381 80 0 0 chr17 9996836 9997147 -79507406 + AluY SINE Alu 1 311 0 1944 116 0 88 chr17 9997796 9998000 -79506553 - AluSg SINE Alu -10 300 134 243 0 0 0 chr17 9998000 9998027 -79506526 + (TG)n Simple_repeat Simple_repeat 2 28 0 1944 116 0 88 chr17 9998027 9998151 -79506402 - AluSg SINE Alu -176 134 1 241 389 37 12 chr17 9999209 9999371 -79505182 + L2 LINE L2 3107 3272 0 1045 272 75 24 chr17 10000265 10000615 -79503938 + MLT1J2 LTR MaLR 14 390 -60 2337 103 3 0 chr17 10000615 10000927 -79503626 + AluSq SINE Alu 1 313 0 1045 272 75 24 chr17 10000927 10000992 -79503561 + MLT1J2 LTR MaLR 390 450 0 1268 244 81 56 chr17 10001554 10002000 -79502553 + LTR16A1 LTR ERVL 1 457 0 2167 121 0 3 chr17 10002367 10002680 -79501873 - AluSx SINE Alu 0 312 1 499 291 11 30 chr17 10002744 10002929 -79501624 + MIR3 SINE MIR 6 187 -21 905 189 20 31 chr17 10002963 10003159 -79501394 + MER63A DNA MER1_type 1 194 -16 202 382 36 6 chr17 10003497 10003662 -79500891 + L3 LINE CR1 1277 1446 -131 232 304 89 37 chr17 10004007 10004142 -79500411 - MIR3 SINE MIR -24 184 43 339 288 7 43 chr17 10004928 10005067 -79499486 + GA-rich Low_complexity Low_complexity 3 136 0 419 219 0 24 chr17 10005123 10005205 -79499348 - MER116 DNA Mariner 0 80 1 777 224 130 0 chr17 10005357 10005549 -79499004 + MER20 DNA MER1_type 1 217 -2 2249 102 0 0 chr17 10005810 10006103 -79498450 - AluSx SINE Alu -19 293 1 2294 89 7 0 chr17 10006112 10006416 -79498137 - AluSp SINE Alu -7 306 1 366 304 127 19 chr17 10006490 10006750 -79497803 + L1MC5 LINE L1 7616 7903 -58 2509 64 3 0 chr17 10006947 10007258 -79497295 - AluSx SINE Alu 0 312 1 786 213 197 0 chr17 10007399 10007582 -79496971 - MER20 DNA MER1_type 0 219 1 722 295 73 7 chr17 10007734 10008036 -79496517 - L1ME LINE L1 -325 5796 5475 443 82 0 0 chr17 10008068 10008129 -79496424 - AluJo SINE Alu -16 296 236 892 158 0 58 chr17 10008129 10008300 -79496253 - AluJo SINE Alu -140 172 12 369 329 76 29 chr17 10008369 10008587 -79495966 - L1ME LINE L1 -759 5387 5181 2261 79 3 0 chr17 10008587 10008878 -79495675 - AluSp SINE Alu -21 292 1 369 329 76 29 chr17 10008878 10009192 -79495361 - L1ME LINE L1 -965 5181 4883 2149 115 0 0 chr17 10009192 10009487 -79495066 - AluSx SINE Alu -17 295 1 369 329 76 29 chr17 10009487 10010047 -79494506 - L1ME LINE L1 -1263 4883 4243 2212 108 0 0 chr17 10010407 10010704 -79493849 + AluSg SINE Alu 1 297 -13 723 227 77 73 chr17 10010720 10010967 -79493586 + MIR SINE MIR 6 253 -9 1954 185 44 31 chr17 10011573 10011611 -79492942 - L1MB5 LINE L1 -1 6173 6137 2175 120 3 0 chr17 10011611 10011910 -79492643 - AluSq SINE Alu -13 300 1 1954 185 44 31 chr17 10011910 10012211 -79492342 - L1MB5 LINE L1 -37 6137 5824 1696 158 0 60 chr17 10012211 10012527 -79492026 - AluJb SINE Alu -15 297 1 1954 185 44 31 chr17 10012527 10012641 -79491912 - L1MB5 LINE L1 -350 5824 5713 415 234 90 0 chr17 10012980 10013091 -79491462 - MIR SINE MIR -54 208 88 606 273 52 5 chr17 10013755 10013949 -79490604 - MER63A DNA MER1_type 0 210 8 236 271 187 32 chr17 10014070 10014225 -79490328 - MIR3 SINE MIR -20 188 10 1519 255 46 26 chr17 10016229 10016688 -79487865 - Charlie4a DNA MER1_type -11 497 30 1712 154 0 20 chr17 10017773 10018066 -79486487 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr17 10018067 10018093 -79486460 + AT_rich Low_complexity Low_complexity 1 26 0 1964 123 0 0 chr17 10019718 10019994 -79484559 + AluSx SINE Alu 1 276 -36 287 355 47 6 chr17 10020828 10021000 -79483553 - MIR3 SINE MIR 0 208 30 2278 86 3 7 chr17 10021842 10022144 -79482409 - AluSq SINE Alu -12 301 1 271 283 166 28 chr17 10023224 10023369 -79481184 + MLT1J LTR MaLR 343 507 -4 269 301 0 0 chr17 10023768 10023871 -79480682 + (CA)n Simple_repeat Simple_repeat 2 104 0 205 371 9 9 chr17 10024411 10024527 -79480026 + MIR3 SINE MIR 86 201 -7 2032 170 20 59 chr17 10025245 10025651 -79478902 + MLT1B LTR MaLR 1 390 0 1008 76 0 0 chr17 10027126 10027257 -79477296 - AluSp/q SINE Alu -9 304 174 532 87 0 0 chr17 10027257 10027326 -79477227 - AluS SINE Alu -243 70 2 569 254 66 0 chr17 10027326 10027555 -79476998 - L1MC/D LINE L1 -758 5388 5199 2058 58 65 0 chr17 10027566 10027841 -79476712 - AluY SINE Alu -18 293 1 2211 102 3 0 chr17 10027869 10028173 -79476380 + AluSp SINE Alu 1 305 -8 353 336 108 9 chr17 10028265 10028589 -79475964 + L2 LINE L2 2859 3214 -99 291 28 0 0 chr17 10029159 10029195 -79475358 + (TG)n Simple_repeat Simple_repeat 2 37 0 434 281 105 7 chr17 10029744 10029897 -79474656 - MIR SINE MIR -1 261 94 2427 78 0 0 chr17 10030168 10030474 -79474079 - AluSx SINE Alu -6 306 1 368 264 47 0 chr17 10030811 10030917 -79473636 - MIR3 SINE MIR -6 202 92 2346 77 3 0 chr17 10031509 10031806 -79472747 - AluSp SINE Alu -15 298 1 25 0 0 0 chr17 10031809 10031834 -79472719 + AT_rich Low_complexity Low_complexity 1 25 0 991 171 11 23 chr17 10031994 10032170 -79472383 + MER5B DNA MER1_type 3 176 -2 2310 96 0 0 chr17 10033415 10033716 -79470837 + AluSx SINE Alu 1 301 -11 552 15 0 0 chr17 10033842 10033907 -79470646 + (TGG)n Simple_repeat Simple_repeat 2 66 0 637 140 13 140 chr17 10035487 10035591 -79468962 + MER45A DNA AcHobo 42 121 -1460 1920 108 0 37 chr17 10035591 10035886 -79468667 - AluSx SINE Alu 0 312 29 637 140 13 140 chr17 10035886 10035938 -79468615 + MER45A DNA AcHobo 121 178 0 399 41 0 0 chr17 10036530 10036579 -79467974 + (TG)n Simple_repeat Simple_repeat 2 50 0 342 0 0 0 chr17 10036871 10036909 -79467644 + (TG)n Simple_repeat Simple_repeat 2 39 0 1624 180 61 44 chr17 10037451 10037812 -79466741 + MLT1B LTR MaLR 19 385 -5 2143 111 0 3 chr17 10038252 10038559 -79465994 - AluSg SINE Alu -4 306 1 308 308 63 43 chr17 10038597 10038849 -79465704 + L2 LINE L2 2764 3034 -238 1689 157 0 17 chr17 10039077 10039386 -79465167 - AluJb SINE Alu 0 304 1 326 290 145 54 chr17 10039414 10039635 -79464918 - L1ME4a LINE L1 -55 6066 5826 1877 146 26 3 chr17 10039652 10039954 -79464599 + AluSx SINE Alu 1 309 -3 688 254 12 129 chr17 10040040 10040219 -79464334 - L1ME4a LINE L1 -369 5752 5554 2130 85 0 4 chr17 10040219 10040537 -79464016 - AluSg SINE Alu 0 317 1 688 254 12 129 chr17 10040537 10040869 -79463684 - L1ME4a LINE L1 -567 5554 5296 259 276 0 87 chr17 10041336 10041463 -79463090 - MIR SINE MIR -63 145 30 211 396 50 22 chr17 10042693 10042832 -79461721 - L2 LINE L2 -9 3263 3121 791 159 0 6 chr17 10042979 10043155 -79461398 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 266 284 0 0 chr17 10043155 10043222 -79461331 + (TAGG)n Simple_repeat Simple_repeat 2 68 0 1137 178 53 0 chr17 10044093 10044301 -79460252 + MER20 DNA MER1_type 1 219 0 2334 71 10 3 chr17 10044417 10044727 -79459826 + AluSp SINE Alu 2 313 0 418 269 0 37 chr17 10045710 10045818 -79458735 - L2 LINE L2 -7 3265 3162 1758 108 0 8 chr17 10046594 10046843 -79457710 - AluSx SINE Alu -16 296 50 1572 113 0 9 chr17 10046843 10047070 -79457483 - AluSc SINE Alu -82 227 1 482 294 43 16 chr17 10047137 10047324 -79457229 + MIR3 SINE MIR 15 206 -2 690 120 0 0 chr17 10047795 10047895 -79456658 - LTR12 LTR ERV1 0 714 615 325 261 11 0 chr17 10047897 10047989 -79456564 - LTR30 LTR ERV1 -79 643 551 288 182 91 15 chr17 10048000 10048066 -79456487 - LTR12 LTR ERV1 -439 275 205 1112 127 127 10 chr17 10048109 10048314 -79456239 - LTR12 LTR ERV1 -484 230 2 2051 135 0 3 chr17 10049825 10050137 -79454416 - AluSq SINE Alu -2 311 1 913 119 8 0 chr17 10050137 10050271 -79454282 - AluSq/x SINE Alu -177 135 1 448 128 116 0 chr17 10051436 10051522 -79453031 + MER53 DNA DNA 1 96 -93 314 305 156 32 chr17 10052308 10052462 -79452091 + L3 LINE CR1 1394 1566 -11 1924 57 4 38 chr17 10052534 10052796 -79451757 - AluY SINE Alu -21 290 38 2288 85 3 3 chr17 10054117 10054422 -79450131 - AluSx SINE Alu -7 305 1 383 255 56 43 chr17 10055530 10055691 -79448862 + MIR SINE MIR 2 164 -98 2227 101 3 0 chr17 10055861 10056158 -79448395 + AluSq SINE Alu 1 298 -15 325 278 16 16 chr17 10056980 10057106 -79447447 + L2 LINE L2 2996 3121 -192 435 218 47 59 chr17 10057243 10057413 -79447140 + L2 LINE L2 3146 3313 0 757 300 131 67 chr17 10057433 10057741 -79446812 + L2 LINE L2 1290 1577 -1737 2155 111 0 46 chr17 10057741 10057917 -79446636 - AluSx SINE Alu -3 309 153 1597 52 61 5 chr17 10057917 10058130 -79446423 - AluSg/x SINE Alu -17 293 69 2155 111 0 46 chr17 10058130 10058277 -79446276 - AluSx SINE Alu -159 153 1 757 300 131 67 chr17 10058277 10059199 -79445354 + L2 LINE L2 1577 2598 -716 285 368 15 40 chr17 10059199 10059400 -79445153 - L1MEd LINE L1 -5582 537 342 386 261 124 0 chr17 10059943 10060104 -79444449 - MER112 DNA MER1_type -12 248 68 619 141 27 13 chr17 10060107 10060256 -79444297 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 192 398 11 0 chr17 10060381 10060474 -79444079 + L2 LINE L2 3204 3297 -16 2336 83 0 3 chr17 10062245 10062546 -79442007 - AluSx SINE Alu -12 300 1 246 275 29 0 chr17 10062621 10062690 -79441863 - L2 LINE L2 0 3272 3202 500 332 61 43 chr17 10062704 10063032 -79441521 - L2 LINE L2 -4 3268 2935 2334 95 0 9 chr17 10063450 10063765 -79440788 - AluSx SINE Alu 0 312 1 197 281 0 31 chr17 10064203 10064267 -79440286 - MIR SINE MIR -124 84 23 512 245 82 27 chr17 10065434 10065581 -79438972 - MER5B DNA MER1_type -3 175 21 2254 96 3 3 chr17 10065854 10066157 -79438396 + AluSg SINE Alu 1 303 -7 2053 97 10 48 chr17 10066157 10066468 -79438085 + AluSc SINE Alu 1 299 -10 2056 125 3 0 chr17 10067165 10067462 -79437091 - AluSp SINE Alu -15 298 1 195 284 112 89 chr17 10067487 10067934 -79436619 - L2 LINE L2 -8 3264 2771 1340 119 4 44 chr17 10068029 10068256 -79436297 + AluY SINE Alu 87 304 -7 1321 148 0 5 chr17 10068264 10068473 -79436080 + AluSg/x SINE Alu 92 299 -13 216 0 0 0 chr17 10068598 10068622 -79435931 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 982 278 78 38 chr17 10068623 10069023 -79435530 - L2 LINE L2 -14 3299 2884 2343 48 7 7 chr17 10069484 10069779 -79434774 + AluY SINE Alu 1 295 -16 318 337 116 32 chr17 10069814 10070004 -79434549 + L3 LINE CR1 1037 1242 -335 1172 106 0 0 chr17 10070058 10070219 -79434334 + AluSq SINE Alu 152 312 -1 355 312 100 48 chr17 10070230 10070461 -79434092 + L3 LINE CR1 1333 1575 -2 231 36 0 0 chr17 10070478 10070506 -79434047 + (CCTG)n Simple_repeat Simple_repeat 3 30 0 231 152 0 0 chr17 10070508 10070554 -79433999 + CT-rich Low_complexity Low_complexity 4 49 0 2483 213 77 25 chr17 10070605 10071014 -79433539 - L1ME2 LINE L1 -117 6116 5730 1782 112 44 20 chr17 10071014 10071309 -79433244 + AluSx SINE Alu 1 302 -10 2483 213 77 25 chr17 10071309 10071755 -79432798 - L1ME2 LINE L1 -503 5730 5214 240 378 150 0 chr17 10071814 10071941 -79432612 + L3 LINE CR1 1038 1183 -394 2052 218 48 155 chr17 10071941 10072256 -79432297 - L1ME2 LINE L1 -992 5223 4876 225 0 0 0 chr17 10072256 10072281 -79432272 + (CA)n Simple_repeat Simple_repeat 2 26 0 2052 218 48 155 chr17 10072281 10072400 -79432153 - L1ME2 LINE L1 -1339 4876 4746 2150 71 3 11 chr17 10072400 10072719 -79431834 - AluY SINE Alu 0 317 1 2052 218 48 155 chr17 10072719 10073721 -79430832 - L1ME2 LINE L1 -1469 4746 3939 577 254 46 0 chr17 10073721 10073827 -79430726 - L1ME2 LINE L1 -3089 3126 3026 1637 191 32 61 chr17 10073827 10074203 -79430350 - MLT1A1 LTR MaLR 0 365 1 577 254 46 0 chr17 10074203 10074293 -79430260 - L1ME2 LINE L1 -3189 3026 2921 399 196 21 21 chr17 10074321 10074418 -79430135 - L1ME2 LINE L1 -3732 2483 2387 347 250 61 86 chr17 10074434 10074491 -79430062 - L1ME2 LINE L1 -4037 2359 2302 1283 7 7 13 chr17 10074491 10074644 -79429909 + L1PA6 LINE L1 6003 6154 0 347 250 61 86 chr17 10074644 10074866 -79429687 - L1ME2 LINE L1 -4094 2302 2087 246 32 0 0 chr17 10074877 10074908 -79429645 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 0 0 0 chr17 10075076 10075098 -79429455 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2087 86 0 0 chr17 10075107 10075376 -79429177 - AluSg SINE Alu -31 279 11 189 352 0 0 chr17 10075415 10075469 -79429084 - L2 LINE L2 -31 3241 3188 247 274 162 17 chr17 10075595 10075712 -79428841 + L2 LINE L2 2925 3058 -214 1115 162 56 20 chr17 10075846 10076043 -79428510 - Tigger3(Golem) DNA MER2_type -1 3028 2825 734 208 11 71 chr17 10076384 10076449 -79428104 - MIR SINE MIR 0 262 195 2249 92 0 0 chr17 10076449 10076744 -79427809 - AluSq SINE Alu -18 295 1 734 208 11 71 chr17 10076744 10076861 -79427692 - MIR SINE MIR -67 195 91 2284 100 0 0 chr17 10077651 10077962 -79426591 - AluSq SINE Alu -1 312 2 1001 279 118 0 chr17 10078138 10078536 -79426017 + LTR16A LTR ERVL 1 445 -5 195 42 0 0 chr17 10078914 10078938 -79425615 + (CA)n Simple_repeat Simple_repeat 1 24 0 2336 71 0 23 chr17 10080277 10080586 -79423967 - AluY SINE Alu -9 302 1 722 82 20 0 chr17 10080586 10080684 -79423869 - AluSg/x SINE Alu -8 302 203 2306 74 7 3 chr17 10080705 10081004 -79423549 - AluSg SINE Alu -10 300 1 2268 173 44 22 chr17 10081007 10081456 -79423097 + MER68 LTR ERV1 34 492 -70 473 255 0 0 chr17 10081456 10081550 -79423003 + MER82 DNA MER2_type 1 94 -559 366 338 32 6 chr17 10081588 10081745 -79422808 - MIR SINE MIR -73 189 29 690 287 12 0 chr17 10081770 10081937 -79422616 + MER82 DNA MER2_type 447 615 -38 470 154 0 26 chr17 10081923 10082001 -79422552 + MER68 LTR ERV1 480 555 -7 * 1964 86 93 7 chr17 10082591 10082871 -79421682 - AluSq SINE Alu -9 304 1 1967 142 15 9 chr17 10082946 10083284 -79421269 + MER2 DNA MER2_type 2 341 -3 1002 200 45 155 chr17 10083288 10083668 -79420885 + MER21B LTR ERV1 15 352 -511 642 234 78 73 chr17 10083717 10083922 -79420631 + MER21B LTR ERV1 364 569 -294 1132 89 0 0 chr17 10083926 10084072 -79420481 - AluSg/x SINE Alu -13 299 154 647 240 58 23 chr17 10084072 10084243 -79420310 - MER21B LTR ERV1 -126 737 561 2177 101 0 3 chr17 10084243 10084549 -79420004 + AluSg SINE Alu 1 305 -5 2116 108 0 0 chr17 10085451 10085747 -79418806 + AluSg SINE Alu 1 296 -14 529 319 37 61 chr17 10085802 10085871 -79418682 + HAL1 LINE L1 811 880 -1627 1893 140 45 72 chr17 10085871 10085994 -79418559 - MLT1B LTR MaLR 0 390 265 2332 100 0 0 chr17 10085994 10086305 -79418248 - AluSx SINE Alu -1 311 1 1893 140 45 72 chr17 10086305 10086400 -79418153 - MLT1B LTR MaLR -125 265 169 1724 168 0 39 chr17 10086400 10086710 -79417843 - AluJb SINE Alu -14 298 1 1893 140 45 72 chr17 10086710 10086891 -79417662 - MLT1B LTR MaLR -221 169 1 529 319 37 61 chr17 10086891 10087147 -79417406 + HAL1 LINE L1 880 1128 -1379 356 302 86 40 chr17 10087452 10087674 -79416879 - L1MEd LINE L1 -5779 340 109 2266 87 0 0 chr17 10087689 10087987 -79416566 - AluSx SINE Alu -14 298 1 463 311 64 43 chr17 10088398 10088678 -79415875 + L2 LINE L2 3027 3312 -1 421 165 59 24 chr17 10088769 10088803 -79415750 + (TA)n Simple_repeat Simple_repeat 2 33 -144 1955 100 0 0 chr17 10088803 10089063 -79415490 + AluSx SINE Alu 1 260 -52 421 165 59 24 chr17 10089063 10089198 -79415355 + (TA)n Simple_repeat Simple_repeat 33 177 0 519 332 47 64 chr17 10089373 10089840 -79414713 + L2 LINE L2 2813 3271 -1 2085 92 3 3 chr17 10090426 10090735 -79413818 - AluY SINE Alu 0 309 1 2264 146 6 0 chr17 10091203 10091538 -79413015 + MER1B DNA MER1_type 1 337 0 905 190 0 0 chr17 10091578 10091736 -79412817 + FAM SINE Alu 1 158 -17 225 214 12 71 chr17 10091759 10091843 -79412710 + MER113 DNA MER1_type? 1 79 -442 2123 102 0 0 chr17 10092199 10092494 -79412059 + AluSp SINE Alu 16 310 -3 1773 214 70 37 chr17 10092608 10093094 -79411459 - MLT1D LTR MaLR -2 503 2 387 298 171 10 chr17 10093699 10093904 -79410649 - L2 LINE L2 0 3313 3076 2045 111 0 36 chr17 10094086 10094392 -79410161 + AluSx SINE Alu 1 295 -17 685 236 0 0 chr17 10094560 10094687 -79409866 + FLAM_A SINE Alu 1 127 -15 215 325 95 8 chr17 10094689 10094815 -79409738 - L2 LINE L2 -594 2720 2584 2173 102 3 0 chr17 10145426 10145720 -79358833 - AluSq SINE Alu -18 295 1 487 171 0 34 chr17 10146306 10146481 -79358072 + G-rich Low_complexity Low_complexity 1 169 0 432 300 38 33 chr17 10146662 10146872 -79357681 - MLT1K LTR MaLR -121 467 257 320 263 118 33 chr17 10146916 10147068 -79357485 - MLT1K LTR MaLR -411 177 13 278 326 50 35 chr17 10147158 10147299 -79357254 - MIR SINE MIR -65 197 55 802 306 60 16 chr17 10147723 10148106 -79356447 + LTR16C LTR ERVL 90 489 -2 1771 87 76 11 chr17 10148963 10149255 -79355298 + AluSg SINE Alu 1 309 0 2043 102 16 13 chr17 10149416 10149719 -79354834 + AluSx SINE Alu 1 304 -8 2263 86 7 0 chr17 10150402 10150705 -79353848 + AluSx SINE Alu 1 305 -7 1263 100 0 0 chr17 10150710 10150880 -79353673 + AluSg/x SINE Alu 121 290 -20 183 245 82 0 chr17 10151669 10151718 -79352835 + MIR SINE MIR 32 84 -124 214 300 20 0 chr17 10151730 10151780 -79352773 + MIR SINE MIR 3 53 -209 1964 87 20 17 chr17 10151933 10152231 -79352322 + AluSg SINE Alu 1 299 -11 678 258 146 0 chr17 10152374 10152587 -79351966 + MIR SINE MIR 19 262 0 188 176 27 162 chr17 10152607 10152644 -79351909 + MIR3 SINE MIR 124 148 -60 365 263 26 105 chr17 10152644 10152834 -79351719 + MER5B DNA MER1_type 1 175 -3 188 176 27 162 chr17 10152834 10152870 -79351683 + MIR3 SINE MIR 148 187 -21 3054 170 40 16 chr17 10152971 10153553 -79351000 - L1MB5 LINE L1 -6 6168 5573 566 165 19 10 chr17 10154587 10154690 -79349863 + MIR SINE MIR 1 104 -158 2011 115 0 7 chr17 10155068 10155375 -79349178 - AluSx SINE Alu 0 305 1 847 271 24 5 chr17 10155855 10156065 -79348488 - MIR SINE MIR -21 241 28 223 299 47 9 chr17 10156102 10156209 -79348344 + L3 LINE CR1 1143 1253 -324 333 306 69 28 chr17 10156496 10156640 -79347913 - L1ME3 LINE L1 -22 6140 5991 2083 73 62 3 chr17 10157053 10157342 -79347211 - AluSc SINE Alu -3 306 1 216 0 0 0 chr17 10157902 10157926 -79346627 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1732 149 0 11 chr17 10157926 10158207 -79346346 - AluJo SINE Alu -34 278 1 1272 38 0 6 chr17 10158219 10158377 -79346176 - AluY SINE Alu -4 307 151 1645 113 4 4 chr17 10159186 10159424 -79345129 - AluSq SINE Alu -41 272 35 912 155 16 36 chr17 10159500 10159693 -79344860 + MER53 DNA DNA 1 189 0 2218 105 3 0 chr17 10160212 10160516 -79344037 - AluSq SINE Alu -8 305 1 260 297 55 0 chr17 10160676 10160767 -79343786 + L1ME4a LINE L1 5596 5691 -430 243 252 0 54 chr17 10160906 10161017 -79343536 + L1ME4a LINE L1 5946 6050 -71 2044 114 7 0 chr17 10161161 10161468 -79343085 + AluY SINE Alu 1 309 -2 726 173 47 0 chr17 10161590 10161717 -79342836 - FLAM_C SINE Alu 0 133 1 291 253 114 0 chr17 10161992 10162071 -79342482 - L1P LINE L1 -1979 4167 4080 621 178 48 7 chr17 10162394 10162540 -79342013 + AluSg/x SINE Alu 70 221 -91 515 204 0 0 chr17 10163161 10163249 -79341304 + L2 LINE L2 3225 3312 -1 2193 113 37 53 chr17 10164661 10164701 -79339852 - THE1C LTR MaLR -1 374 335 2007 127 23 0 chr17 10164701 10165000 -79339553 + AluSx SINE Alu 1 306 -6 2193 113 37 53 chr17 10165000 10165339 -79339214 - THE1C LTR MaLR -40 335 1 304 299 21 21 chr17 10165884 10165981 -79338572 - MIR SINE MIR -147 115 19 234 231 39 13 chr17 10166049 10166127 -79338426 + L1ME4a LINE L1 5969 6048 -73 719 247 88 24 chr17 10166147 10166521 -79338032 - MLT1K LTR MaLR -4 584 149 262 225 132 70 chr17 10166813 10166942 -79337611 - MIR SINE MIR -105 157 21 397 197 0 0 chr17 10167210 10167276 -79337277 - MIR SINE MIR -149 113 48 541 187 57 167 chr17 10167293 10167539 -79337014 - MER20 DNA MER1_type 0 219 1 2163 107 0 0 chr17 10167634 10167925 -79336628 - AluSg SINE Alu -19 291 1 394 311 185 8 chr17 10167956 10168216 -79336337 + L2 LINE L2 2617 2922 -392 1856 140 7 10 chr17 10168821 10169128 -79335425 - AluJo SINE Alu 0 312 7 225 325 8 17 chr17 10169356 10169476 -79335077 - LTR67 LTR ERVL -11 546 428 196 304 72 14 chr17 10170228 10170297 -79334256 - MIR SINE MIR 0 262 190 2206 111 0 0 chr17 10170297 10170594 -79333959 - AluSx SINE Alu -15 297 1 437 237 9 26 chr17 10170598 10170712 -79333841 - MIR SINE MIR -54 208 97 2190 110 0 0 chr17 10170774 10171074 -79333479 - AluSx SINE Alu -12 300 1 2079 104 0 3 chr17 10171084 10171401 -79333152 - AluSq SINE Alu 0 316 1 283 232 71 18 chr17 10171618 10171730 -79332823 - L1MC4 LINE L1 -1 8041 7924 450 220 68 8 chr17 10171960 10172078 -79332475 + MER106B DNA MER1_type 935 1059 0 2439 60 0 0 chr17 10172113 10172413 -79332140 - AluY SINE Alu -11 300 1 1699 227 42 34 chr17 10172685 10172752 -79331801 + MLT1D LTR MaLR 1 66 -439 2476 124 13 5 chr17 10172752 10173124 -79331429 - THE1C LTR MaLR 0 375 1 1699 227 42 34 chr17 10173124 10173550 -79331003 + MLT1D LTR MaLR 66 498 -7 1123 120 12 132 chr17 10174640 10174898 -79329655 + AluJb SINE Alu 86 312 0 270 193 0 0 chr17 10175241 10175298 -79329255 + (TG)n Simple_repeat Simple_repeat 2 58 0 181 133 67 0 chr17 10175414 10175444 -79329109 - MIR SINE MIR -176 86 55 2084 102 0 33 chr17 10176316 10176620 -79327933 - AluSg SINE Alu -16 294 1 645 299 101 50 chr17 10176952 10177516 -79327037 - L2 LINE L2 -2 3311 2677 2207 107 0 0 chr17 10177516 10177815 -79326738 - AluSx SINE Alu -13 299 1 645 299 101 50 chr17 10177815 10177988 -79326565 - L2 LINE L2 -636 2677 2514 237 266 18 101 chr17 10178127 10178236 -79326317 - L2 LINE L2 -170 3102 3003 189 0 0 0 chr17 10178756 10178777 -79325776 + (TG)n Simple_repeat Simple_repeat 1 21 0 2140 108 3 9 chr17 10179458 10179773 -79324780 - AluSq SINE Alu 0 313 1 16150 18 0 0 chr17 10180490 10183086 -79321467 + L1HS LINE L1 3544 6139 -16 183 42 0 0 chr17 10183086 10183110 -79321443 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1220 189 59 42 chr17 10183350 10183657 -79320896 + AluJo SINE Alu 1 312 0 277 242 15 0 chr17 10183703 10183769 -79320784 - HAL1 LINE L1 -854 1653 1587 643 227 138 32 chr17 10183773 10184020 -79320533 - L1ME3A LINE L1 -1 6169 5897 1439 240 60 0 chr17 10184060 10184540 -79320013 - L1ME LINE L1 -3523 2557 2049 281 261 63 59 chr17 10184513 10184751 -79319802 - L1ME LINE L1 -4308 1772 1534 * 282 29 0 0 chr17 10184751 10184786 -79319767 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 847 204 6 0 chr17 10184786 10184943 -79319610 - FAM SINE Alu -26 159 2 1073 265 106 55 chr17 10184984 10186097 -79318456 - L1ME LINE L1 -4689 1393 321 251 350 12 25 chr17 10186340 10186500 -79318053 - L1ME LINE L1 -5625 445 288 240 331 36 55 chr17 10186540 10186902 -79317651 - L1ME LINE L1 -5665 405 51 2088 125 0 0 chr17 10187319 10187614 -79316939 - AluSq SINE Alu -18 295 1 21 57 0 0 chr17 10187734 10187769 -79316784 + AT_rich Low_complexity Low_complexity 1 35 0 1976 108 21 4 chr17 10188312 10188624 -79315929 + AluSx SINE Alu 1 317 0 356 212 35 0 chr17 10188702 10188787 -79315766 + L1MA10 LINE L1 6234 6321 -13 195 42 0 0 chr17 10188791 10188815 -79315738 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1534 157 3 45 chr17 10188832 10189118 -79315435 - AluJo SINE Alu -38 274 1 2219 91 3 0 chr17 10189363 10189659 -79314894 - AluSg SINE Alu -13 297 1 422 48 24 48 chr17 10190544 10190628 -79313925 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 1914 94 0 123 chr17 10190630 10190972 -79313581 - AluSq SINE Alu -3 300 1 1932 90 0 125 chr17 10191380 10191809 -79312744 + AluSq SINE Alu 1 386 0 2228 91 3 0 chr17 10192694 10192991 -79311562 + AluSg SINE Alu 1 298 -12 1579 157 0 45 chr17 10193237 10193524 -79311029 + AluJo SINE Alu 1 274 -38 195 42 0 0 chr17 10193541 10193565 -79310988 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 356 212 35 0 chr17 10193569 10193654 -79310899 - L1MA10 LINE L1 -13 6321 6234 1685 134 21 18 chr17 10193732 10194048 -79310505 - AluSx SINE Alu 0 317 1 1446 161 3 77 chr17 10194053 10194363 -79310190 - AluJo SINE Alu -12 300 14 806 244 104 37 chr17 10194382 10194710 -79309843 - L2 LINE L2 -569 2745 2396 1977 122 3 7 chr17 10195192 10195479 -79309074 - AluSx SINE Alu -26 286 1 2157 66 0 26 chr17 10195650 10195952 -79308601 - AluY SINE Alu -13 298 5 272 222 79 0 chr17 10196268 10196331 -79308222 + MER20B DNA MER1_type 516 583 -200 543 94 0 28 chr17 10196339 10196578 -79307975 + AluSx SINE Alu 1 292 -18 1191 119 0 0 chr17 10196578 10196746 -79307807 + AluSg/x SINE Alu 121 288 -24 644 213 52 6 chr17 10196766 10196940 -79307613 + MER20B DNA MER1_type 602 783 0 2146 91 0 3 chr17 10197867 10198237 -79306316 + AluSq SINE Alu 1 369 0 2249 85 0 0 chr17 10198742 10199047 -79305506 + AluSg SINE Alu 2 306 -4 400 253 63 11 chr17 10199124 10199219 -79305334 - MER5A DNA MER1_type -83 106 7 1793 108 0 4 chr17 10199603 10199852 -79304701 - AluSx SINE Alu -64 248 1 533 309 64 16 chr17 10200736 10200985 -79303568 + MIR SINE MIR 2 262 0 2059 124 0 3 chr17 10201124 10201422 -79303131 + AluSx SINE Alu 1 297 -15 318 296 77 61 chr17 10201605 10201902 -79302651 - L2 LINE L2 -130 3183 2882 3190 81 17 52 chr17 10202208 10202610 -79301943 - L1PA11 LINE L1 0 6174 5790 1779 155 0 32 chr17 10202610 10202920 -79301633 - AluSx SINE Alu -12 300 1 3190 81 17 52 chr17 10202920 10202999 -79301554 - L1PA11 LINE L1 -384 5790 5710 2014 104 14 0 chr17 10204318 10204626 -79299927 + AluSx SINE Alu 1 312 0 627 222 120 19 chr17 10204664 10204880 -79299673 + L1ME4a LINE L1 5882 6119 -2 404 281 67 15 chr17 10205594 10205729 -79298824 + MIR SINE MIR 87 228 -34 1979 65 59 52 chr17 10206075 10206381 -79298172 - AluSq SINE Alu -5 308 1 25 0 0 0 chr17 10207650 10207675 -79296878 + GC_rich Low_complexity Low_complexity 1 25 0 333 286 157 19 chr17 10208469 10208733 -79295820 - L2 LINE L2 -212 3060 2763 336 102 0 0 chr17 10209038 10209087 -79295466 + (A)n Simple_repeat Simple_repeat 1 49 0 640 182 297 21 chr17 10209361 10209553 -79295000 + MIR SINE MIR 2 246 -16 2368 49 0 52 chr17 10209699 10210026 -79294527 + AluY SINE Alu 1 310 -1 336 252 104 109 chr17 10210298 10210691 -79293862 - L2 LINE L2 -3 3310 2920 603 201 0 0 chr17 10210812 10210946 -79293607 + CT-rich Low_complexity Low_complexity 2 135 0 682 229 0 0 chr17 10210957 10211088 -79293465 - AluJo/FRAM SINE Alu -3 309 179 1557 101 0 0 chr17 10211089 10211298 -79293255 + AluSg/x SINE Alu 88 296 -14 1440 181 4 11 chr17 10211340 10211617 -79292936 - L1PA16 LINE L1 0 6166 5892 365 279 85 23 chr17 10211619 10211748 -79292805 - L1ME4a LINE L1 -4 6117 5981 300 258 141 31 chr17 10211776 10211939 -79292614 - L1ME4a LINE L1 -222 5899 5719 292 253 192 0 chr17 10211995 10212094 -79292459 + L1P LINE L1 4050 4167 -1979 * 318 265 61 30 chr17 10212093 10212225 -79292328 - L1ME4a LINE L1 -384 5737 5602 373 300 1 3 chr17 10212244 10212357 -79292196 - L1ME2 LINE L1 -2 6332 6059 1538 129 53 4 chr17 10212400 10212663 -79291890 - AluSx SINE Alu -36 276 1 538 170 86 0 chr17 10212664 10212779 -79291774 - L1MA8 LINE L1 -118 6173 6050 1242 144 36 0 chr17 10212819 10213013 -79291540 - L1PB1 LINE L1 -7 6144 5944 308 280 11 11 chr17 10213050 10213143 -79291410 - L1ME4a LINE L1 -693 5428 5336 2216 101 0 13 chr17 10213148 10213464 -79291089 - AluSx SINE Alu 0 312 1 503 308 64 20 chr17 10214347 10214597 -79289956 + MIR SINE MIR 2 262 0 2044 128 0 3 chr17 10214736 10215034 -79289519 + AluSx SINE Alu 1 297 -15 324 297 78 57 chr17 10215217 10215513 -79289040 - L2 LINE L2 -130 3183 2882 284 186 16 85 chr17 10215893 10215915 -79288638 + G-rich Low_complexity Low_complexity 6 28 -152 191 61 30 0 chr17 10215915 10215948 -79288605 + (TGGG)n Simple_repeat Simple_repeat 2 35 0 284 186 16 85 chr17 10215948 10216113 -79288440 + G-rich Low_complexity Low_complexity 28 180 0 * 291 228 30 42 chr17 10215976 10216143 -79288410 + (GGGTG)n Simple_repeat Simple_repeat 2 166 0 201 74 0 0 chr17 10216372 10216399 -79288154 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 380 336 91 16 chr17 10216399 10216828 -79287725 + HAL1 LINE L1 1153 1613 -894 316 291 77 50 chr17 10217369 10217589 -79286964 + L1MEc LINE L1 2161 2386 -4010 314 324 32 46 chr17 10217646 10217868 -79286685 + L1MEc LINE L1 2384 2599 -3616 1945 95 16 54 chr17 10217868 10218183 -79286370 + AluSq SINE Alu 1 303 -10 314 324 32 46 chr17 10218183 10218395 -79286158 + L1MEc LINE L1 2599 2812 -3403 288 86 0 0 chr17 10218409 10218444 -79286109 + tRNA-Trp tRNA tRNA 1 35 -40 357 276 98 0 chr17 10218536 10218659 -79285894 + L1MEc LINE L1 2943 3077 -3138 426 243 86 21 chr17 10218662 10218802 -79285751 + MER69 DNA AcHobo 1 149 -1077 396 255 23 42 chr17 10218978 10219117 -79285436 - MER20B DNA MER1_type -21 198 58 2365 88 3 0 chr17 10219117 10219412 -79285141 + AluSp SINE Alu 1 296 -17 1879 134 15 0 chr17 10219553 10219822 -79284731 - AluSx SINE Alu 0 312 40 2068 146 0 0 chr17 10219825 10220119 -79284434 - AluSx SINE Alu -17 295 2 1122 128 0 0 chr17 10220767 10220923 -79283630 - AluSp SINE Alu -21 292 137 2448 87 3 0 chr17 10221039 10221338 -79283215 - AluSp SINE Alu -5 308 9 2501 167 120 38 chr17 10221596 10221809 -79282744 - MER6A DNA MER2_type -261 604 410 2467 68 0 3 chr17 10221809 10222103 -79282450 + AluSc SINE Alu 1 293 -16 2501 167 120 38 chr17 10222103 10222447 -79282106 - MER6A DNA MER2_type -455 410 1 288 0 0 0 chr17 10222512 10222544 -79282009 + (CA)n Simple_repeat Simple_repeat 2 33 0 486 264 8 0 chr17 10222544 10222669 -79281884 + L1ME LINE L1 5617 5742 -428 2233 87 0 71 chr17 10222727 10223049 -79281504 - AluSg SINE Alu -11 299 1 216 0 0 0 chr17 10223610 10223634 -79280919 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1846 149 0 11 chr17 10223634 10223915 -79280638 - AluJo SINE Alu -34 278 1 1342 38 0 6 chr17 10223927 10224085 -79280468 - AluY SINE Alu -4 307 151 973 145 11 32 chr17 10224959 10225145 -79279408 - MER5A DNA MER1_type -6 183 2 401 46 81 46 chr17 10225396 10225569 -79278984 + (TA)n Simple_repeat Simple_repeat 2 180 0 464 75 69 29 chr17 10225584 10225757 -79278796 + (TA)n Simple_repeat Simple_repeat 1 180 0 2343 77 0 74 chr17 10225908 10226245 -79278308 - AluSx SINE Alu 0 312 1 2183 104 0 0 chr17 10226753 10227042 -79277511 + AluSq SINE Alu 18 306 -7 338 274 18 26 chr17 10227076 10227189 -79277364 + L2 LINE L2 3200 3311 -2 1365 208 46 14 chr17 10228723 10229070 -79275483 - MLT1A1 LTR MaLR -7 358 1 2024 90 4 22 chr17 10229304 10229571 -79274982 - AluSg SINE Alu -10 300 39 262 109 0 22 chr17 10229793 10229839 -79274714 + MADE1 DNA Mariner 2 46 -34 415 267 0 0 chr17 10230135 10230240 -79274313 + L2 LINE L2 3161 3265 -7 23 0 0 0 chr17 10231440 10231463 -79273090 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr17 10231884 10231914 -79272639 + AT_rich Low_complexity Low_complexity 1 30 0 195 42 0 0 chr17 10232452 10232476 -79272077 + (A)n Simple_repeat Simple_repeat 1 24 0 2266 100 7 3 chr17 10232572 10232873 -79271680 + AluSx SINE Alu 1 302 -10 2439 164 55 49 chr17 10233868 10234154 -79270399 - LTR22 LTR ERVK 0 509 217 1828 88 32 0 chr17 10234154 10234404 -79270149 + L1PA6 LINE L1 5891 6148 -6 2439 164 55 49 chr17 10234404 10234623 -79269930 - LTR22 LTR ERVK -292 217 1 4042 36 13 2 chr17 10235014 10235490 -79269063 + L1PA3 LINE L1 5672 6152 -3 1105 190 43 9 chr17 10235517 10235749 -79268804 - MIR SINE MIR -10 252 13 837 282 115 18 chr17 10235771 10236101 -79268452 - HERVL LTR ERVL -3035 2619 2258 2490 60 0 17 chr17 10236250 10236552 -79268001 - AluY SINE Alu -14 297 1 446 314 49 20 chr17 10236687 10237069 -79267484 - HERVL LTR ERVL -3544 2220 1763 2193 117 0 10 chr17 10237141 10237450 -79267103 + AluSp SINE Alu 1 306 -7 1821 139 3 24 chr17 10237693 10238007 -79266546 - AluJo SINE Alu 0 308 1 2193 127 0 0 chr17 10238395 10238702 -79265851 - AluSx SINE Alu -5 307 1 236 200 19 133 chr17 10239101 10239206 -79265347 - L1M4 LINE L1 -854 5292 5200 465 216 32 0 chr17 10239216 10239341 -79265212 - L1M4 LINE L1 -912 5234 5106 * 1272 250 71 47 chr17 10239321 10239719 -79264834 - L1M4 LINE L1 -2717 3429 3013 2243 101 19 7 chr17 10239719 10239898 -79264655 - AluSq SINE Alu -1 312 126 192 40 0 0 chr17 10239898 10239923 -79264630 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2243 101 19 7 chr17 10239923 10240051 -79264502 - AluSq SINE Alu -187 126 1 1272 250 71 47 chr17 10240051 10240200 -79264353 - L1M4 LINE L1 -3133 3013 2869 2065 126 0 0 chr17 10240584 10240878 -79263675 - AluSx SINE Alu -18 294 1 194 350 41 10 chr17 10241003 10241100 -79263453 + MIR SINE MIR 47 146 -116 335 241 58 0 chr17 10241105 10241192 -79263361 - MER63 DNA MER1_type 0 1060 969 * 465 186 137 0 chr17 10241177 10241279 -79263274 - MER63 DNA MER1_type -93 743 2 305 303 87 16 chr17 10241356 10241541 -79263012 + MIR SINE MIR 9 206 -56 2331 84 0 7 chr17 10241626 10241923 -79262630 + AluSx SINE Alu 1 295 -17 409 280 63 0 chr17 10242084 10242227 -79262326 - MIR SINE MIR -6 256 105 369 130 0 0 chr17 10242244 10242298 -79262255 + MER116 DNA Mariner 27 80 0 2190 134 0 0 chr17 10242408 10242715 -79261838 - AluSq SINE Alu -6 307 1 1499 174 4 0 chr17 10242838 10243091 -79261462 + L1PA16 LINE L1 5791 6044 -122 472 206 11 0 chr17 10243178 10243270 -79261283 + L1PB4 LINE L1 6050 6142 -14 1864 137 4 11 chr17 10243315 10243592 -79260961 + AluSx SINE Alu 1 275 -37 2183 98 17 3 chr17 10244045 10244332 -79260221 - AluY SINE Alu -20 291 1 1716 181 0 26 chr17 10244522 10244826 -79259727 - AluJb SINE Alu -16 296 1 2418 79 3 0 chr17 10245237 10245529 -79259024 - AluSg SINE Alu -17 293 1 268 278 79 63 chr17 10245848 10245974 -79258579 + MIR SINE MIR 19 146 -62 345 314 208 0 chr17 10246011 10246218 -79258335 + MIR SINE MIR 13 262 0 1520 195 182 90 chr17 10246590 10246750 -79257803 - LTR41 LTR ERVL -6 767 623 1780 122 107 7 chr17 10246750 10247021 -79257532 + AluSq SINE Alu 1 298 -15 1520 195 182 90 chr17 10247021 10247507 -79257046 - LTR41 LTR ERVL -150 623 61 2269 105 0 16 chr17 10247521 10247836 -79256717 - AluSg SINE Alu 0 310 1 324 164 96 14 chr17 10247836 10247909 -79256644 - LTR41 LTR ERVL -694 79 1 23 0 0 0 chr17 10248573 10248596 -79255957 + AT_rich Low_complexity Low_complexity 1 23 0 2177 103 4 0 chr17 10248596 10248877 -79255676 - AluSx SINE Alu -27 285 4 2063 133 0 20 chr17 10249372 10249674 -79254879 + AluSx SINE Alu 1 296 -16 26 30 0 0 chr17 10250585 10250618 -79253935 + AT_rich Low_complexity Low_complexity 1 33 0 1815 117 8 11 chr17 10250985 10251251 -79253302 + AluSg SINE Alu 45 309 -1 25 0 0 0 chr17 10251346 10251371 -79253182 + AT_rich Low_complexity Low_complexity 1 25 0 227 283 139 53 chr17 10251463 10251572 -79252981 + L1ME3 LINE L1 5276 5374 -747 2548 63 3 0 chr17 10251572 10251872 -79252681 + AluSp SINE Alu 6 306 -7 227 283 139 53 chr17 10251872 10252215 -79252338 + L1ME3 LINE L1 5374 5794 -327 6470 103 32 15 chr17 10252761 10253763 -79250790 - L1MA5 LINE L1 -2 6298 5280 291 203 0 0 chr17 10254002 10254066 -79250487 + (TG)n Simple_repeat Simple_repeat 2 65 0 2514 55 0 10 chr17 10255063 10255373 -79249180 - AluY SINE Alu -4 307 1 2417 82 0 0 chr17 10255444 10255735 -79248818 - AluSc SINE Alu -18 291 1 1722 164 10 17 chr17 10255777 10256075 -79248478 - AluJb SINE Alu -16 296 1 1875 159 0 17 chr17 10256499 10256800 -79247753 - AluJo SINE Alu -16 296 1 378 179 193 14 chr17 10257503 10257643 -79246910 - L1MB4 LINE L1 -6 6174 6010 2215 109 7 0 chr17 10257690 10257984 -79246569 + AluSx SINE Alu 2 297 -15 1837 182 22 25 chr17 10257984 10258195 -79246358 - L1MB4 LINE L1 -152 6028 5817 2212 111 7 10 chr17 10258195 10258502 -79246051 - AluSp SINE Alu -7 306 1 1837 182 22 25 chr17 10258502 10258658 -79245895 - L1MB4 LINE L1 -363 5817 5662 2250 111 0 10 chr17 10259296 10259603 -79244950 - AluSx SINE Alu -8 304 1 256 280 32 40 chr17 10259616 10259741 -79244812 + MIR SINE MIR 37 160 -102 1046 138 23 0 chr17 10260605 10260779 -79243774 + L1ME4a LINE L1 5301 5478 -700 2215 102 3 10 chr17 10260779 10261072 -79243481 - AluSx SINE Alu -21 291 1 2116 92 34 7 chr17 10261082 10261377 -79243176 - AluSg SINE Alu -7 303 1 2512 63 0 3 chr17 10261711 10262012 -79242541 + AluY SINE Alu 1 300 -11 2266 108 3 0 chr17 10262236 10262531 -79242022 - AluSx SINE Alu -16 296 1 263 217 169 21 chr17 10262766 10262955 -79241598 + L1ME4a LINE L1 5840 6056 -65 1692 81 190 8 chr17 10263188 10263435 -79241118 + AluSg1 SINE Alu 1 292 -17 1344 246 43 33 chr17 10263537 10263928 -79240625 + L1ME3 LINE L1 5768 6162 0 237 119 0 0 chr17 10264314 10264356 -79240197 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 26 30 0 0 chr17 10264356 10264389 -79240164 + AT_rich Low_complexity Low_complexity 1 33 0 589 151 27 16 chr17 10264389 10264872 -79239681 + (TA)n Simple_repeat Simple_repeat 1 488 0 304 224 20 51 chr17 10264872 10264970 -79239583 - L1MCa LINE L1 -4361 2065 1971 430 196 52 12 chr17 10264987 10265160 -79239393 + (TA)n Simple_repeat Simple_repeat 1 180 0 2042 104 0 0 chr17 10266024 10266294 -79238259 - AluSc SINE Alu -3 306 37 789 318 55 13 chr17 10267787 10268171 -79236382 - LTR16C LTR ERVL -2 489 90 212 340 50 35 chr17 10268596 10268737 -79235816 + MIR SINE MIR 55 197 -65 320 263 118 33 chr17 10268827 10268979 -79235574 + MLT1K LTR MaLR 13 177 -411 430 300 38 33 chr17 10269023 10269233 -79235320 + MLT1K LTR MaLR 257 467 -121 486 75 0 0 chr17 10269533 10269600 -79234953 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 189 0 0 0 chr17 10269598 10269619 -79234934 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 995 130 14 0 chr17 10269609 10269769 -79234784 - AluSg/x SINE Alu -10 302 151 530 306 41 0 chr17 10270259 10270297 -79234256 - LTR33 LTR ERVL 0 521 486 1739 204 79 27 chr17 10270297 10270739 -79233814 - MLT1C LTR MaLR -2 465 1 530 306 41 0 chr17 10270739 10270896 -79233657 - LTR33 LTR ERVL -35 486 318 2107 93 10 0 chr17 10271238 10271540 -79233013 + AluSq SINE Alu 1 305 -8 196 111 0 0 chr17 10271864 10271891 -79232662 + MIR SINE MIR 118 144 -118 270 0 0 0 chr17 10272087 10272117 -79232436 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2152 83 3 0 chr17 10273063 10273352 -79231201 + AluY SINE Alu 1 290 -21 2041 111 9 19 chr17 10273527 10273842 -79230711 - AluSx SINE Alu 0 312 1 1024 80 13 13 chr17 10274084 10274234 -79230319 - AluSg SINE Alu -160 150 1 326 164 96 14 chr17 10274234 10274307 -79230246 - LTR41 LTR ERVL -694 79 1 372 253 22 101 chr17 10274913 10275091 -79229462 - L1ME4a LINE L1 -2 6119 5956 263 226 21 21 chr17 10275661 10275754 -79228799 - L1M4 LINE L1 -1701 4445 4353 1865 139 0 0 chr17 10275774 10276054 -79228499 - AluJb SINE Alu -32 280 1 318 326 156 28 chr17 10276152 10276434 -79228119 - L1M4 LINE L1 -1946 4200 3883 288 257 44 29 chr17 10276788 10276924 -79227629 - L1MEd LINE L1 -3896 2233 2096 813 222 51 34 chr17 10277118 10277411 -79227142 - L1M4 LINE L1 -1455 4691 4394 444 256 68 44 chr17 10277441 10277520 -79227033 - L1MEd LINE L1 -4938 1181 1105 2130 128 0 0 chr17 10277520 10277826 -79226727 + AluSx SINE Alu 1 306 -6 444 256 68 44 chr17 10277826 10278039 -79226514 - L1MEd LINE L1 -5014 1105 882 436 317 105 62 chr17 10278603 10278909 -79225644 - MLT1K LTR MaLR -257 331 13 2130 105 0 0 chr17 10280317 10280612 -79223941 - AluSg SINE Alu -15 295 1 2052 102 0 3 chr17 10281614 10281907 -79222646 + AluY SINE Alu 1 292 -19 839 60 0 26 chr17 10281936 10282053 -79222500 + L1PA5 LINE L1 6041 6154 0 729 144 20 0 chr17 10282975 10283121 -79221432 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 378 0 0 0 chr17 10283414 10283456 -79221097 + (CA)n Simple_repeat Simple_repeat 2 43 0 2233 151 15 33 chr17 10283752 10284149 -79220404 - MLT1B LTR MaLR 0 390 1 2153 107 0 7 chr17 10284577 10284885 -79219668 - AluSg SINE Alu -4 306 1 2027 106 16 13 chr17 10285568 10285871 -79218682 - AluSx SINE Alu -8 304 1 1808 91 72 11 chr17 10286032 10286325 -79218228 - AluSg SINE Alu 0 309 1 1881 109 49 0 chr17 10286589 10286873 -79217680 - AluSx SINE Alu -14 298 1 2142 62 0 4 chr17 10287207 10287480 -79217073 + AluY SINE Alu 1 272 -39 1916 91 11 0 chr17 10287773 10288038 -79216515 + L1PA8 LINE L1 5905 6172 0 601 232 9 14 chr17 10288045 10288256 -79216297 - L1MCa LINE L1 -3132 3294 3085 336 278 158 23 chr17 10288303 10288436 -79216117 - L1MCa LINE L1 -4483 1943 1793 1113 274 117 22 chr17 10289017 10289097 -79215456 - LTR16C LTR ERVL -4 487 416 1986 116 7 13 chr17 10289097 10289407 -79215146 + AluSx SINE Alu 1 308 -4 1113 274 117 22 chr17 10289407 10289771 -79214782 - LTR16C LTR ERVL -75 416 1 734 247 88 18 chr17 10289968 10290178 -79214375 + L1MC/D LINE L1 5509 5738 -2070 2327 75 0 3 chr17 10290178 10290472 -79214081 + AluY SINE Alu 1 293 -18 967 148 24 0 chr17 10290472 10290641 -79213912 - L1M4 LINE L1 -700 5478 5306 308 268 28 63 chr17 10291501 10291643 -79212910 - MIR SINE MIR -89 173 37 2159 115 0 6 chr17 10291656 10291968 -79212585 + AluSx SINE Alu 1 310 -2 716 233 186 36 chr17 10292515 10292697 -79211856 + MER5C DNA MER1_type 8 162 -162 2010 105 0 3 chr17 10292697 10293026 -79211527 - AluSx SINE Alu 0 328 1 716 233 186 36 chr17 10293026 10293117 -79211436 + MER5C DNA MER1_type 162 323 -1 1930 176 14 39 chr17 10293405 10293445 -79211108 - L1MB3 LINE L1 0 6183 6144 1967 113 0 7 chr17 10293445 10293727 -79210826 - AluSc SINE Alu -21 288 9 1930 176 14 39 chr17 10293727 10294102 -79210451 - L1MB3 LINE L1 -39 6144 5778 442 327 133 26 chr17 10294145 10294226 -79210327 + L2 LINE L2 2090 2161 -1153 1982 129 3 3 chr17 10294226 10294536 -79210017 - AluSx SINE Alu -2 310 1 442 327 133 26 chr17 10294536 10294800 -79209753 + L2 LINE L2 2161 2472 -842 213 319 0 0 chr17 10294817 10294889 -79209664 + L2 LINE L2 2737 2808 -506 2129 113 0 0 chr17 10295037 10295360 -79209193 + AluSx SINE Alu 1 312 0 5054 160 21 7 chr17 10295439 10296483 -79208070 - L1PA16 LINE L1 -13 6153 5100 860 227 16 77 chr17 10298622 10298869 -79205684 - MIR SINE MIR -23 239 8 379 282 86 59 chr17 10298919 10299174 -79205379 - L2 LINE L2 -2 3270 3009 1413 173 67 28 chr17 10300182 10300466 -79204087 + AluJo SINE Alu 1 295 -17 248 219 0 55 chr17 10301845 10301918 -79202635 - MIR SINE MIR -174 88 20 991 226 107 53 chr17 10301990 10302402 -79202151 - HAL1 LINE L1 -779 1728 1295 1954 114 0 44 chr17 10302405 10302720 -79201833 - AluSx SINE Alu -11 301 1 1218 264 67 96 chr17 10303198 10303576 -79200977 - L1MC4a LINE L1 -748 5398 5721 2279 92 3 13 chr17 10303576 10303891 -79200662 + AluSx SINE Alu 1 312 0 1218 264 67 96 chr17 10303891 10304704 -79199849 - L1MC4a LINE L1 -424 5722 4887 2314 84 0 3 chr17 10304735 10305046 -79199507 - AluSg SINE Alu 0 310 1 2452 47 0 3 chr17 10305468 10305766 -79198787 + AluY SINE Alu 1 297 -14 30 45 0 0 chr17 10305768 10305812 -79198741 + AT_rich Low_complexity Low_complexity 1 44 0 881 351 93 13 chr17 10305895 10306667 -79197886 - L2 LINE L2 0 3272 2439 593 231 77 122 chr17 10306677 10306724 -79197829 + MER58C DNA MER1_type 3 51 -2369 2228 98 0 3 chr17 10306724 10307030 -79197523 - AluSg SINE Alu -5 305 1 593 231 77 122 chr17 10307030 10307203 -79197350 + MER58C DNA MER1_type 51 213 -2 2071 102 0 0 chr17 10307537 10307850 -79196703 + AluSx SINE Alu 1 313 0 1984 77 0 22 chr17 10308604 10308876 -79195677 - AluSc SINE Alu -7 302 37 491 258 92 7 chr17 10309179 10309425 -79195128 + LTR40a LTR ERVL 123 358 -104 2253 92 0 6 chr17 10309519 10309834 -79194719 - AluSq SINE Alu 0 313 1 1083 248 91 98 chr17 10310584 10310889 -79193664 - L2 LINE L2 -248 3065 2760 270 0 0 0 chr17 10310889 10310919 -79193634 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1083 248 91 98 chr17 10310919 10310951 -79193602 - L2 LINE L2 -553 2760 2729 1848 124 51 40 chr17 10310951 10311203 -79193350 - L1MA4 LINE L1 -11 6289 6030 2073 104 7 0 chr17 10311203 10311492 -79193061 - AluSx SINE Alu -21 291 1 1848 124 51 40 chr17 10311492 10311593 -79192960 - L1MA4 LINE L1 -270 6030 5932 1083 248 91 98 chr17 10311593 10312009 -79192544 - L2 LINE L2 -584 2729 2315 1982 126 11 0 chr17 10312011 10312380 -79192173 - Charlie3 DNA MER1_type -4 2706 1 891 291 96 14 chr17 10312409 10312504 -79192049 - L2 LINE L2 -1060 2254 2168 2372 70 0 10 chr17 10312504 10312806 -79191747 + AluSg SINE Alu 1 299 -11 891 291 96 14 chr17 10312806 10313139 -79191414 - L2 LINE L2 -1146 2168 1791 1614 177 29 0 chr17 10313299 10313576 -79190977 + AluJb SINE Alu 17 301 -11 839 164 3 0 chr17 10313597 10314233 -79190320 + (TG)n Simple_repeat Simple_repeat 1 638 0 23 54 0 0 chr17 10314325 10314362 -79190191 + AT_rich Low_complexity Low_complexity 1 37 0 314 195 130 0 chr17 10314454 10314531 -79190022 - L1ME3A LINE L1 -52 6118 6032 2050 84 3 71 chr17 10314959 10315282 -79189271 + AluSx SINE Alu 1 301 -11 192 309 29 0 chr17 10315667 10315735 -79188818 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 10315918 10316108 -79188445 + MIR3 SINE MIR 8 203 -5 977 245 69 35 chr17 10316644 10316962 -79187591 - MLT1I LTR MaLR -1 408 80 556 210 156 27 chr17 10317339 10317525 -79187028 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 10317556 10317672 -79186881 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 10317935 10318452 -79186101 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 10319259 10319292 -79185261 + MIR SINE MIR 73 105 -157 576 169 0 0 chr17 10319742 10319831 -79184722 - FLAM_A SINE Alu -49 93 5 391 308 73 6 chr17 10320339 10320496 -79184057 + MIR SINE MIR 47 218 -44 2536 175 53 46 chr17 10321359 10321885 -79182668 - LTR31 LTR ERV1 -15 604 75 2199 266 101 60 chr17 10321979 10323402 -79181151 - HAL1 LINE L1 -607 1900 420 291 267 44 0 chr17 10323622 10323712 -79180841 - HAL1 LINE L1 -2370 137 44 682 269 44 26 chr17 10323865 10324092 -79180461 + MIR SINE MIR 32 262 0 2362 96 3 0 chr17 10324343 10324645 -79179908 + AluSx SINE Alu 1 303 -9 739 281 25 34 chr17 10324706 10324941 -79179612 - MIR SINE MIR -29 233 1 21 0 0 0 chr17 10325876 10325897 -79178656 + AT_rich Low_complexity Low_complexity 1 21 0 2274 114 0 25 chr17 10326234 10326549 -79178004 + AluSx SINE Alu 5 311 -1 393 61 0 61 chr17 10327168 10327234 -79177319 - L1PA16 LINE L1 -2 6164 6103 2171 102 14 10 chr17 10327250 10327545 -79177008 + AluSq SINE Alu 2 297 -16 300 111 0 0 chr17 10327548 10327593 -79176960 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 507 207 9 9 chr17 10327790 10327906 -79176647 - L1ME3A LINE L1 -9 6161 6046 224 267 150 0 chr17 10328033 10328093 -79176460 + L2 LINE L2 3232 3300 -13 183 42 0 0 chr17 10328133 10328157 -79176396 + (CA)n Simple_repeat Simple_repeat 2 25 0 742 270 98 14 chr17 10328194 10328332 -79176221 + MIR SINE MIR 3 167 -95 2411 105 0 0 chr17 10328332 10328636 -79175917 - AluSx SINE Alu -8 304 1 742 270 98 14 chr17 10328636 10328712 -79175841 + MIR SINE MIR 167 235 -27 316 87 0 0 chr17 10329891 10329937 -79174616 + AluSq/x SINE Alu 90 135 -167 2297 108 0 0 chr17 10329937 10330232 -79174321 + AluSx SINE Alu 1 295 -17 804 156 0 8 chr17 10330441 10330569 -79173984 + FLAM_C SINE Alu 1 127 -16 1821 57 0 25 chr17 10330569 10330843 -79173710 + L1PA8 LINE L1 5929 6172 0 1615 137 128 9 chr17 10331104 10331441 -79173112 - L1MB2 LINE L1 0 6171 5795 2258 93 0 7 chr17 10331458 10331748 -79172805 - AluSc SINE Alu -21 288 1 1619 167 10 61 chr17 10332045 10332193 -79172360 + AluJo SINE Alu 1 126 -186 1875 139 0 77 chr17 10332193 10332516 -79172037 + AluSx SINE Alu 1 298 -14 1619 167 10 61 chr17 10332516 10332679 -79171874 + AluJo SINE Alu 126 296 -16 296 294 55 60 chr17 10332963 10333164 -79171389 - MIR SINE MIR -31 231 32 2488 77 7 3 chr17 10333635 10333945 -79170608 + AluSq SINE Alu 1 311 -2 285 97 0 48 chr17 10333949 10334011 -79170542 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 441 256 26 8 chr17 10334554 10334671 -79169882 + L2 LINE L2 1868 1986 -1328 2257 100 10 3 chr17 10334687 10334987 -79169566 + AluSc SINE Alu 1 302 -7 525 228 49 9 chr17 10335078 10335226 -79169327 + L1ME3A LINE L1 6001 6161 -3 672 168 0 0 chr17 10335298 10335423 -79169130 + (CA)n Simple_repeat Simple_repeat 1 125 0 262 209 4 0 chr17 10335702 10335760 -79168793 - MIR SINE MIR -59 149 90 276 321 0 0 chr17 10336828 10336909 -79167644 + Charlie8 DNA MER1_type 5 85 -2332 755 238 138 0 chr17 10336939 10337128 -79167425 + MIR SINE MIR 12 226 -36 348 298 71 0 chr17 10337543 10337711 -79166842 - MARNA DNA Mariner -78 508 329 326 316 88 0 chr17 10338218 10338332 -79166221 + L2 LINE L2 3147 3270 -2 452 330 109 0 chr17 10338398 10338619 -79165934 - L1M4 LINE L1 -3321 2825 2581 2309 97 0 0 chr17 10339239 10339527 -79165026 + AluSx SINE Alu 1 288 -24 27 0 0 0 chr17 10339527 10339554 -79164999 + AT_rich Low_complexity Low_complexity 1 27 0 252 291 19 19 chr17 10339625 10339728 -79164825 + HsTC2 DNA Tc2 1 103 -1795 1894 161 0 13 chr17 10339741 10340046 -79164507 + AluJb SINE Alu 8 308 -4 234 220 0 0 chr17 10340050 10340100 -79164453 + HsTC2 DNA Tc2 40 89 -1809 2383 95 0 0 chr17 10340500 10340794 -79163759 + AluSq SINE Alu 1 294 -19 361 324 0 9 chr17 10340915 10341026 -79163527 + MIR SINE MIR 32 141 -121 2414 59 0 14 chr17 10341378 10341705 -79162848 - AluSq SINE Alu 0 323 1 21 0 0 0 chr17 10342813 10342834 -79161719 + AT_rich Low_complexity Low_complexity 1 21 0 562 301 107 35 chr17 10342909 10343213 -79161340 - L1MC/D LINE L1 -764 5382 5147 2371 88 0 28 chr17 10343213 10343247 -79161306 - AluY SINE Alu -1 310 277 195 42 0 0 chr17 10343247 10343271 -79161282 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2371 88 0 28 chr17 10343271 10343555 -79160998 - AluY SINE Alu -34 277 1 562 301 107 35 chr17 10343555 10343732 -79160821 - L1MC/D LINE L1 -999 5147 4984 1785 129 98 0 chr17 10343806 10344062 -79160491 - AluSx SINE Alu -31 281 1 238 248 177 9 chr17 10344291 10344404 -79160149 - L1MC/D LINE L1 -1490 4656 4525 1147 212 81 90 chr17 10344989 10345446 -79159107 + LTR16A1 LTR ERVL 1 453 -4 206 200 0 60 chr17 10345451 10345501 -79159052 + MIR SINE MIR 159 205 -57 420 308 112 33 chr17 10345849 10346063 -79158490 + L3 LINE CR1 1344 1574 -3 229 279 143 68 chr17 10346580 10346845 -79157708 - MARNA DNA Mariner -42 544 260 632 205 39 32 chr17 10346907 10347063 -79157490 + MER103 DNA DNA 9 165 -1 326 169 0 17 chr17 10347204 10347263 -79157290 + L2 LINE L2 3254 3311 -2 367 350 51 6 chr17 10347274 10347451 -79157102 - MARNA DNA Mariner -343 243 59 1591 141 17 0 chr17 10348720 10348954 -79155599 + AluSg SINE Alu 55 292 -18 205 296 96 48 chr17 10349316 10349441 -79155112 + MIR3 SINE MIR 5 135 -73 2331 78 7 13 chr17 10349453 10349762 -79154791 - AluY SINE Alu -4 307 1 715 249 148 22 chr17 10349822 10350180 -79154373 + MER113 DNA MER1_type? 24 426 -95 355 175 12 9 chr17 10350219 10350301 -79154252 + L1PA16 LINE L1 6087 6166 0 210 296 148 28 chr17 10350834 10350942 -79153611 - L2 LINE L2 -20 3252 3132 1876 152 32 76 chr17 10351413 10351641 -79152912 - MLT1B LTR MaLR 0 390 186 2318 119 0 3 chr17 10351641 10351952 -79152601 - AluSx SINE Alu -2 310 1 1876 152 32 76 chr17 10351952 10352131 -79152422 - MLT1B LTR MaLR -204 186 1 454 194 104 22 chr17 10352454 10352588 -79151965 - MLT1J1 LTR MaLR -301 145 1 2031 143 4 0 chr17 10353288 10353588 -79150965 + AluSx SINE Alu 1 301 0 226 290 176 23 chr17 10353604 10353735 -79150818 + L2 LINE L2 3122 3272 0 2198 91 24 3 chr17 10353849 10354147 -79150406 + AluSx SINE Alu 2 305 -7 465 265 26 50 chr17 10354600 10354796 -79149757 - MIR SINE MIR -52 210 14 220 224 149 0 chr17 10354773 10354840 -79149713 + MIR3 SINE MIR 110 186 -22 * 398 255 0 149 chr17 10355464 10355652 -79148901 + MIR SINE MIR 29 188 -74 802 189 18 24 chr17 10357197 10357366 -79147187 + MER3 DNA MER1_type 23 190 -19 229 159 48 32 chr17 10357426 10357489 -79147064 + C-rich Low_complexity Low_complexity 6 69 0 2317 107 0 19 chr17 10357672 10357990 -79146563 + AluSx SINE Alu 1 312 0 1044 189 39 45 chr17 10358130 10358202 -79146351 - MLT1A1 LTR MaLR -81 284 213 1752 152 81 3 chr17 10358202 10358485 -79146068 - AluJo SINE Alu -7 305 1 1044 189 39 45 chr17 10358485 10358698 -79145855 - MLT1A1 LTR MaLR -152 213 1 335 180 0 0 chr17 10359410 10359471 -79145082 + MIR SINE MIR 95 155 -107 2322 84 7 3 chr17 10359520 10359816 -79144737 - AluSg SINE Alu -13 297 1 1782 92 0 17 chr17 10360689 10360927 -79143626 + AluSc SINE Alu 1 234 -75 268 164 18 36 chr17 10360928 10360983 -79143570 + MIR SINE MIR 90 143 -65 485 258 13 38 chr17 10361070 10361229 -79143324 + MER103 DNA DNA 3 157 -9 2319 156 48 24 chr17 10361376 10361794 -79142759 + MSTC LTR MaLR 1 428 0 831 156 0 0 chr17 10361941 10362120 -79142433 + (TG)n Simple_repeat Simple_repeat 1 179 0 902 151 6 0 chr17 10362158 10362525 -79142028 + (TG)n Simple_repeat Simple_repeat 1 369 0 2218 118 14 0 chr17 10363016 10363313 -79141240 - AluSx SINE Alu -11 301 1 247 347 82 12 chr17 10363488 10363658 -79140895 + L2 LINE L2 2902 3083 -189 2033 191 3 3 chr17 10363660 10363899 -79140654 - MSTA LTR MaLR 0 428 187 2088 93 3 74 chr17 10363899 10364240 -79140313 - AluSq SINE Alu 0 313 5 2033 191 3 3 chr17 10364240 10364371 -79140182 - MSTA LTR MaLR -240 188 58 252 193 0 53 chr17 10364646 10364703 -79139850 - MER5A DNA MER1_type -2 187 134 656 299 91 29 chr17 10364763 10365214 -79139339 + HAL1 LINE L1 2024 2502 -5 2016 108 73 3 chr17 10365215 10365501 -79139052 - AluSq SINE Alu -7 306 1 990 164 0 18 chr17 10365521 10365713 -79138840 + AluSp SINE Alu 129 317 0 267 333 29 39 chr17 10365714 10365816 -79138737 + MER5A DNA MER1_type 64 164 -25 1614 159 47 43 chr17 10366250 10366551 -79138002 - AluJb SINE Alu -10 302 1 1060 255 9 0 chr17 10367003 10367234 -79137319 - MIR SINE MIR -6 256 24 237 167 0 0 chr17 10367265 10367307 -79137246 - MIR SINE MIR -199 63 22 1919 125 11 4 chr17 10367898 10368210 -79136343 - AluSq SINE Alu 0 314 1 2399 132 55 38 chr17 10368221 10368271 -79136282 - L1MB3 LINE L1 -1 6182 6134 2307 107 3 0 chr17 10368271 10368570 -79135983 - AluSx SINE Alu -12 300 1 1828 83 0 9 chr17 10368579 10368809 -79135744 - AluSg/x SINE Alu -6 306 79 2399 132 55 38 chr17 10368809 10369218 -79135335 - L1MB3 LINE L1 -56 6127 5705 584 214 76 7 chr17 10370681 10370826 -79133727 + MIR SINE MIR 30 184 -78 496 296 104 19 chr17 10371887 10372194 -79132359 - L1ME4a LINE L1 -1 6120 5788 259 294 48 48 chr17 10372279 10372452 -79132101 - L1ME4a LINE L1 0 6121 5945 2135 89 11 0 chr17 10372452 10372757 -79131796 - AluSx SINE Alu 0 308 1 259 294 48 48 chr17 10372757 10372834 -79131719 - L1ME4a LINE L1 -175 5946 5870 424 299 40 45 chr17 10372843 10373044 -79131509 - MIR SINE MIR 0 262 63 1924 131 10 3 chr17 10373269 10373567 -79130986 + AluSg SINE Alu 1 300 -10 372 301 8 6 chr17 10374101 10374219 -79130334 - MIR SINE MIR -50 212 96 32 0 0 0 chr17 10374894 10374926 -79129627 + AT_rich Low_complexity Low_complexity 1 32 0 402 282 106 57 chr17 10374932 10375460 -79129093 + L1ME4a LINE L1 5567 6120 -1 1705 230 4 4 chr17 10376177 10376628 -79127925 + MER119 DNA MER1_type 2 549 -34 202 334 74 42 chr17 10376926 10377237 -79127316 - L2 LINE L2 -46 3226 2906 261 264 46 81 chr17 10377617 10377704 -79126849 + L2 LINE L2 3169 3252 -20 1676 179 0 28 chr17 10377742 10377877 -79126676 + AluJb SINE Alu 3 140 -172 1868 122 38 0 chr17 10377877 10378165 -79126388 + AluSg SINE Alu 1 299 -11 1676 179 0 28 chr17 10378165 10378348 -79126205 + AluJb SINE Alu 140 312 0 2142 113 0 10 chr17 10378565 10378875 -79125678 + AluSc SINE Alu 1 307 -2 805 254 119 20 chr17 10379488 10379925 -79124628 - MLT1G LTR MaLR 0 590 3 1909 74 0 0 chr17 10380609 10380853 -79123700 - AluSc SINE Alu -8 301 58 2144 126 7 0 chr17 10381342 10381652 -79122901 + AluSx SINE Alu 1 312 0 2524 61 28 56 chr17 10382224 10382407 -79122146 - L1MA1 LINE L1 0 6302 6115 258 32 0 0 chr17 10382407 10382438 -79122115 + (TTA)n Simple_repeat Simple_repeat 3 33 0 2074 75 3 20 chr17 10382445 10382737 -79121816 - AluY SINE Alu -24 287 1 2524 61 28 56 chr17 10382737 10382940 -79121613 - L1MA1 LINE L1 -193 6109 5919 394 293 55 30 chr17 10383751 10383915 -79120638 + MIR3 SINE MIR 14 181 -27 711 64 0 0 chr17 10384466 10384560 -79119993 + AluY SINE Alu 152 245 -66 191 381 42 5 chr17 10384767 10384956 -79119597 - L2 LINE L2 -660 2654 2459 228 111 0 0 chr17 10384973 10385009 -79119544 + (TCC)n Simple_repeat Simple_repeat 2 37 0 2096 103 17 0 chr17 10385567 10385858 -79118695 - AluSg SINE Alu -14 296 1 1070 287 96 37 chr17 10386032 10386602 -79117951 - L2 LINE L2 0 3313 2659 2171 84 3 36 chr17 10386602 10386910 -79117643 - AluSx SINE Alu -14 298 1 1070 287 96 37 chr17 10386910 10387313 -79117240 - L2 LINE L2 -654 2659 2281 319 248 95 48 chr17 10387500 10387710 -79116843 - MIR SINE MIR -30 232 13 451 291 64 61 chr17 10388435 10388731 -79115822 + L2 LINE L2 2932 3228 -85 413 315 82 0 chr17 10388880 10389064 -79115489 + MIR SINE MIR 40 238 -24 206 230 0 115 chr17 10389078 10389165 -79115388 + L2 LINE L2 3195 3271 -1 222 324 65 28 chr17 10389399 10389507 -79115046 - L2 LINE L2 -13 3300 3189 181 321 19 0 chr17 10389842 10389895 -79114658 - L2 LINE L2 -576 2738 2685 249 33 0 0 chr17 10390247 10390277 -79114276 + (T)n Simple_repeat Simple_repeat 1 30 0 2389 87 0 0 chr17 10390384 10390696 -79113857 - AluSx SINE Alu 0 312 1 1288 135 50 0 chr17 10390769 10390969 -79113584 - AluJb SINE Alu -17 295 86 319 306 109 7 chr17 10391126 10391273 -79113280 + MIR SINE MIR 98 259 -3 330 26 0 0 chr17 10391441 10391480 -79113073 + (TG)n Simple_repeat Simple_repeat 2 40 0 1840 162 0 10 chr17 10392039 10392348 -79112205 + AluJo SINE Alu 1 306 -6 320 228 40 39 chr17 10392352 10392454 -79112099 + L1MC4 LINE L1 7836 8040 -2 1401 204 85 53 chr17 10392657 10392973 -79111580 + MER63B DNA MER1_type 5 338 -724 2236 73 10 3 chr17 10392973 10393273 -79111280 - AluSq SINE Alu -11 302 1 1401 204 85 53 chr17 10393273 10393354 -79111199 + MER63B DNA MER1_type 338 415 -21 665 193 0 0 chr17 10393578 10393692 -79110861 + FLAM_C SINE Alu 6 119 -24 217 220 0 40 chr17 10394052 10394102 -79110451 + L2 LINE L2 3259 3306 -7 * 549 222 56 24 chr17 10394081 10394207 -79110346 - MER5B DNA MER1_type -46 132 3 252 0 0 0 chr17 10394573 10394601 -79109952 + (TG)n Simple_repeat Simple_repeat 1 28 0 37 29 0 43 chr17 10394761 10394831 -79109722 + AT_rich Low_complexity Low_complexity 1 67 0 722 242 104 15 chr17 10394859 10395119 -79109434 - L1MC4 LINE L1 -1 8041 7759 974 220 77 65 chr17 10395197 10395309 -79109244 - L1MC4a LINE L1 -1973 5835 5726 2503 55 0 3 chr17 10395309 10395618 -79108935 - AluY SINE Alu -3 308 1 974 220 77 65 chr17 10395618 10395828 -79108725 - L1MC4a LINE L1 -2082 5726 5509 1155 270 117 22 chr17 10396025 10396389 -79108164 + LTR16C LTR ERVL 1 416 -75 2008 116 3 13 chr17 10396389 10396700 -79107853 - AluSx SINE Alu -4 308 1 1155 270 117 22 chr17 10396700 10396780 -79107773 + LTR16C LTR ERVL 416 487 -4 336 278 158 23 chr17 10397361 10397494 -79107059 + L1MCa LINE L1 1793 1943 -4483 1049 226 19 36 chr17 10397541 10397759 -79106794 + L1MCa LINE L1 3085 3294 -3132 3327 62 0 5 chr17 10397759 10398180 -79106373 - L1PA8 LINE L1 0 6172 5754 1049 226 19 36 chr17 10398180 10398376 -79106177 + L1MCa LINE L1 3294 3492 -2934 282 143 0 0 chr17 10398483 10398546 -79106007 + (CAT)n Simple_repeat Simple_repeat 3 65 0 1262 242 50 50 chr17 10399110 10399647 -79104906 + L1MCa LINE L1 3477 4013 -2413 1482 121 13 121 chr17 10400346 10400659 -79103894 - Tigger7 DNA MER2_type -1 2586 2308 753 177 0 125 chr17 10400662 10400854 -79103699 - Tigger7 DNA MER2_type -562 171 4 355 233 29 105 chr17 10400917 10401089 -79103464 - MIR3 SINE MIR -11 197 39 263 278 213 35 chr17 10401106 10401275 -79103278 - MIR SINE MIR -17 245 47 639 206 15 121 chr17 10401315 10401514 -79103039 - MIR SINE MIR -46 216 39 205 343 14 0 chr17 10402019 10402089 -79102464 - L2 LINE L2 -73 3199 3129 196 277 12 84 chr17 10402289 10402372 -79102181 - MIR SINE MIR -41 221 145 554 310 26 47 chr17 10402400 10402632 -79101921 + MIR SINE MIR 31 257 -5 2119 99 3 0 chr17 10402632 10402924 -79101629 - AluSc SINE Alu -16 293 1 339 106 0 0 chr17 10402931 10402978 -79101575 - MIR SINE MIR -106 156 110 2267 145 0 6 chr17 10403574 10403919 -79100634 - MER2 DNA MER2_type -1 343 1 2431 249 90 23 chr17 10403959 10405016 -79099537 - L1M4 LINE L1 -2232 3914 2787 2100 110 0 13 chr17 10405216 10405342 -79099211 + AluSc SINE Alu 1 127 -182 201 74 0 0 chr17 10405342 10405369 -79099184 + (TA)n Simple_repeat Simple_repeat 1 27 0 2100 110 0 13 chr17 10405369 10405552 -79099001 + AluSc SINE Alu 127 306 -3 1512 189 73 25 chr17 10406080 10406434 -79098119 - MLT1A2 LTR MaLR 0 374 4 339 368 38 27 chr17 10406549 10406734 -79097819 + MIR3 SINE MIR 20 206 -2 378 270 50 115 chr17 10407150 10407405 -79097148 + L1MC4 LINE L1 5673 5819 -302 584 284 66 30 chr17 10408970 10409167 -79095386 - MIR SINE MIR -10 252 49 506 235 9 0 chr17 10409765 10409880 -79094673 - MER5B DNA MER1_type 0 178 63 629 221 153 18 chr17 10409904 10410067 -79094486 + MER5A DNA MER1_type 4 188 -1 328 144 114 111 chr17 10410082 10410178 -79094375 + MER5A DNA MER1_type 6 141 -48 1944 138 0 0 chr17 10410178 10410527 -79094026 - AluSx SINE Alu 0 312 1 328 144 114 111 chr17 10410527 10410577 -79093976 + MER5A DNA MER1_type 141 189 0 508 358 49 23 chr17 10410771 10411019 -79093534 + L2 LINE L2 2354 2619 -695 198 0 0 0 chr17 10411019 10411041 -79093512 + (TG)n Simple_repeat Simple_repeat 1 22 0 508 358 49 23 chr17 10411041 10411219 -79093334 + L2 LINE L2 2619 2791 -523 196 281 67 59 chr17 10411500 10411635 -79092918 + L3b LINE CR1 1277 1412 -171 437 216 128 8 chr17 10411848 10411973 -79092580 + MIR3 SINE MIR 20 159 -49 1186 160 9 61 chr17 10411974 10412205 -79092348 + MER20 DNA MER1_type 1 219 0 291 188 75 38 chr17 10412215 10412295 -79092258 + MER5B DNA MER1_type 17 99 -79 362 210 240 30 chr17 10412573 10412656 -79091897 + MLT1J2 LTR MaLR 274 383 -67 213 39 0 0 chr17 10412656 10412682 -79091871 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 362 210 240 30 chr17 10412682 10412698 -79091855 + MLT1J2 LTR MaLR 383 394 -56 248 374 0 0 chr17 10414427 10414518 -79090035 - L3b LINE CR1 -248 1335 1245 478 313 25 69 chr17 10414757 10415191 -79089362 + L2 LINE L2 2487 2901 -413 1578 215 67 29 chr17 10415204 10415433 -79089120 - MLT1F1 LTR MaLR -125 442 188 213 39 0 0 chr17 10415433 10415459 -79089094 + (GA)n Simple_repeat Simple_repeat 2 27 0 1578 215 67 29 chr17 10415459 10415647 -79088906 - MLT1F1 LTR MaLR -379 188 9 499 317 30 25 chr17 10415857 10416056 -79088497 + MIR SINE MIR 48 247 -15 264 59 0 0 chr17 10416078 10416112 -79088441 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1618 141 87 0 chr17 10416789 10417065 -79087488 + AluJb SINE Alu 1 300 -12 2364 90 6 0 chr17 10417417 10417728 -79086825 - AluSq SINE Alu 0 313 1 458 326 109 0 chr17 10418348 10418569 -79085984 + L1M4 LINE L1 2581 2825 -3321 324 316 88 0 chr17 10418635 10418749 -79085804 - L2 LINE L2 -2 3270 3147 371 298 71 0 chr17 10419256 10419424 -79085129 + MARNA DNA Mariner 329 508 -78 747 238 138 0 chr17 10419839 10420028 -79084525 - MIR SINE MIR -36 226 12 300 321 0 0 chr17 10420058 10420139 -79084414 - Charlie8 DNA MER1_type -2332 85 5 271 224 35 17 chr17 10421208 10421266 -79083287 + MIR SINE MIR 91 149 -59 672 168 0 0 chr17 10421545 10421670 -79082883 + (TG)n Simple_repeat Simple_repeat 1 125 0 571 215 97 14 chr17 10421742 10421886 -79082667 - L1ME3A LINE L1 -9 6161 6006 2109 100 10 3 chr17 10421982 10422282 -79082271 - AluSc SINE Alu -7 302 1 438 256 26 8 chr17 10422298 10422415 -79082138 - L2 LINE L2 -1328 1986 1868 285 97 0 48 chr17 10422958 10423020 -79081533 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2335 77 7 3 chr17 10423024 10423334 -79081219 - AluSq SINE Alu -2 311 1 287 294 55 60 chr17 10423805 10424006 -79080547 + MIR SINE MIR 32 231 -31 1472 167 10 61 chr17 10424290 10424453 -79080100 - AluJo SINE Alu -16 296 155 1727 139 0 77 chr17 10424453 10424776 -79079777 - AluSx SINE Alu -14 298 1 1472 167 10 61 chr17 10424776 10424924 -79079629 - AluJo SINE Alu -157 155 1 2120 93 0 7 chr17 10425221 10425511 -79079042 + AluSc SINE Alu 1 288 -21 1710 137 128 9 chr17 10425528 10425865 -79078688 + L1MB2 LINE L1 5795 6171 0 1813 57 0 25 chr17 10426126 10426400 -79078153 - L1PA8 LINE L1 0 6172 5929 783 151 0 8 chr17 10426400 10426526 -79078027 - FLAM_C SINE Alu -16 127 3 2077 112 3 0 chr17 10426737 10427031 -79077522 - AluSx SINE Alu -17 295 1 332 87 0 0 chr17 10427031 10427077 -79077476 - AluSq/x SINE Alu -168 135 90 743 270 98 14 chr17 10428256 10428332 -79076221 - MIR SINE MIR -27 235 167 2259 105 0 0 chr17 10428332 10428636 -79075917 + AluSx SINE Alu 1 304 -8 743 270 98 14 chr17 10428636 10428774 -79075779 - MIR SINE MIR -95 167 3 183 42 0 0 chr17 10428811 10428835 -79075718 + (TG)n Simple_repeat Simple_repeat 2 25 0 225 267 150 0 chr17 10428875 10428935 -79075618 - L2 LINE L2 -13 3300 3232 532 207 9 9 chr17 10429062 10429178 -79075375 + L1ME3A LINE L1 6046 6161 -9 300 111 0 0 chr17 10429375 10429420 -79075133 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 1954 105 17 10 chr17 10429423 10429717 -79074836 - AluSq SINE Alu -16 297 2 397 61 0 61 chr17 10429733 10429799 -79074754 + L1PA16 LINE L1 6103 6164 -2 2121 114 0 25 chr17 10430418 10430733 -79073820 - AluSx SINE Alu -1 311 5 21 0 0 0 chr17 10431070 10431091 -79073462 + AT_rich Low_complexity Low_complexity 1 21 0 717 272 39 15 chr17 10432025 10432231 -79072322 + MIR SINE MIR 1 211 -51 1022 117 13 0 chr17 10432320 10432474 -79072079 - AluSg/x SINE Alu -9 303 148 1310 195 44 41 chr17 10432933 10433146 -79071407 + MLT1A1 LTR MaLR 1 217 -148 1565 153 85 3 chr17 10433146 10433428 -79071125 + AluJo SINE Alu 1 305 -7 1310 195 44 41 chr17 10433428 10433557 -79070996 + MLT1A1 LTR MaLR 217 344 -21 192 309 29 0 chr17 10433969 10434037 -79070516 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 10434220 10434410 -79070143 + MIR3 SINE MIR 8 203 -5 971 233 73 37 chr17 10434945 10435245 -79069308 - MLT1I LTR MaLR -1 408 98 556 210 156 27 chr17 10435640 10435826 -79068727 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 10435857 10435973 -79068580 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 10436236 10436753 -79067800 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 10437560 10437593 -79066960 + MIR SINE MIR 73 105 -157 559 169 0 0 chr17 10438043 10438132 -79066421 - FLAM_A SINE Alu -49 93 5 392 303 103 9 chr17 10438640 10438817 -79065736 + MIR SINE MIR 47 249 -13 2711 167 53 46 chr17 10439660 10440186 -79064367 - LTR31 LTR ERV1 -15 604 75 2473 262 102 61 chr17 10440280 10441703 -79062850 - HAL1 LINE L1 -607 1900 420 291 233 56 11 chr17 10441923 10442013 -79062540 - HAL1 LINE L1 -2370 137 44 680 269 44 26 chr17 10442166 10442393 -79062160 + MIR SINE MIR 32 262 0 2180 112 0 0 chr17 10442644 10442947 -79061606 + AluSq SINE Alu 1 303 -10 259 281 61 26 chr17 10443070 10443184 -79061369 + MIR SINE MIR 86 203 -59 260 413 35 6 chr17 10443705 10443824 -79060729 - MER5B DNA MER1_type -1 177 50 1212 107 0 73 chr17 10443824 10444029 -79060524 - MER30B DNA MER1_type 0 190 1 260 413 35 6 chr17 10444029 10444081 -79060472 - MER5B DNA MER1_type -128 50 1 446 180 168 31 chr17 10444295 10444456 -79060097 - Charlie7 DNA MER1_type -5 2607 2425 598 217 17 0 chr17 10444725 10444840 -79059713 + FLAM_C SINE Alu 1 117 -16 21 0 0 0 chr17 10444840 10444861 -79059692 + AT_rich Low_complexity Low_complexity 1 21 0 229 229 73 42 chr17 10445675 10445771 -79058782 + Tigger3(Golem) DNA MER2_type 2218 2316 -713 2099 120 3 0 chr17 10446222 10446523 -79058030 - AluSp SINE Alu -11 302 1 1096 259 97 78 chr17 10446585 10447110 -79057443 - MER34 LTR ERV1 0 542 8 872 270 4 44 chr17 10447213 10447439 -79057114 - MIR SINE MIR 0 262 46 202 227 23 0 chr17 10447507 10447551 -79057002 + L2 LINE L2 3269 3313 0 1016 160 53 70 chr17 10447815 10447955 -79056598 + L1MD3 LINE L1 7756 7892 -103 2213 56 42 0 chr17 10447955 10448242 -79056311 + AluYa5 SINE Alu 2 300 -11 1016 160 53 70 chr17 10448242 10448345 -79056208 + L1MD3 LINE L1 7892 7995 0 923 251 97 28 chr17 10448444 10448763 -79055790 - MER102b DNA MER1_type 0 341 1 321 304 5 98 chr17 10449415 10449479 -79055074 - MER5B DNA MER1_type 0 178 110 1380 188 53 18 chr17 10449479 10449601 -79054952 + AluJo SINE Alu 1 117 -195 797 0 11 0 chr17 10449601 10449694 -79054859 + (TAAAA)n Simple_repeat Simple_repeat 5 98 0 1380 188 53 18 chr17 10449694 10449853 -79054700 + AluJo SINE Alu 117 292 -20 321 304 5 98 chr17 10449853 10449982 -79054571 - MER5B DNA MER1_type -68 110 3 230 273 115 18 chr17 10450198 10450311 -79054242 + MIR SINE MIR 30 153 -93 295 227 172 62 chr17 10450490 10450618 -79053935 - L2 LINE L2 0 3313 3172 482 233 169 97 chr17 10451391 10451725 -79052828 - MLT1G LTR MaLR -41 549 168 2685 3 0 0 chr17 10451725 10452022 -79052531 - AluYa5 SINE Alu -10 301 5 482 233 169 97 chr17 10452022 10452182 -79052371 - MLT1G LTR MaLR -422 168 21 289 294 100 48 chr17 10452286 10452555 -79051998 + L1M4 LINE L1 15 297 -6245 3079 237 53 73 chr17 10452705 10454611 -79049942 + L1M4 LINE L1 533 2555 -4270 413 261 163 38 chr17 10454628 10454812 -79049741 - MIR SINE MIR -54 208 2 314 254 0 0 chr17 10455428 10455495 -79049058 - MLT1G1 LTR MaLR 0 555 489 1161 112 0 6 chr17 10455495 10455720 -79048833 - AluSp SINE Alu 0 341 118 801 239 77 107 chr17 10455731 10456162 -79048391 - MLT1G1 LTR MaLR -113 454 37 1963 96 11 4 chr17 10457592 10457898 -79046655 + AluSq SINE Alu 1 308 0 293 377 27 6 chr17 10458580 10458754 -79045799 + MIR SINE MIR 9 184 -61 2074 129 0 16 chr17 10458803 10459113 -79045440 - AluSx SINE Alu -7 305 1 225 250 0 0 chr17 10459355 10459403 -79045150 + L2 LINE L2 3196 3243 -70 372 315 108 14 chr17 10459403 10459663 -79044890 + L2 LINE L2 2969 3308 -5 348 333 86 12 chr17 10460432 10460594 -79043959 - MER5A DNA MER1_type -15 174 1 397 198 105 0 chr17 10461455 10461541 -79043012 + MER53 DNA DNA 1 95 -94 313 185 99 12 chr17 10461471 10461552 -79043001 - MER53 DNA DNA -7 182 95 * 741 226 145 47 chr17 10461623 10462003 -79042550 - MER96B DNA MER1_type 0 417 1 228 240 27 53 chr17 10462179 10462254 -79042299 + L2 LINE L2 3194 3266 -6 481 213 27 53 chr17 10462748 10462787 -79041766 - MER5B DNA MER1_type -1 177 138 2039 110 3 19 chr17 10462787 10463104 -79041449 - AluSx SINE Alu 0 312 1 481 213 27 53 chr17 10463104 10463214 -79041339 - MER5B DNA MER1_type -40 138 32 4457 172 63 21 chr17 10463215 10463269 -79041284 - L1MB3 LINE L1 0 6183 6133 2213 93 3 0 chr17 10463269 10463570 -79040983 - AluSx SINE Alu -10 302 1 4457 172 63 21 chr17 10463570 10464546 -79040007 - L1MB3 LINE L1 -50 6133 5107 194 279 0 0 chr17 10464552 10464595 -79039958 - MER5B DNA MER1_type -130 48 6 208 261 0 62 chr17 10465330 10465395 -79039158 - MIR SINE MIR -60 148 88 1544 300 42 15 chr17 10465425 10465951 -79038602 + MLT1K LTR MaLR 41 580 -8 194 245 19 0 chr17 10466572 10466625 -79037928 + MIR SINE MIR 101 154 -108 268 265 48 12 chr17 10467014 10467097 -79037456 + MIR SINE MIR 66 151 -57 495 333 111 44 chr17 10467121 10467987 -79036566 + L2 LINE L2 2328 3238 -34 324 120 0 0 chr17 10468329 10468379 -79036174 + (TG)n Simple_repeat Simple_repeat 1 50 0 283 157 0 20 chr17 10469500 10469551 -79035002 + L2 LINE L2 3261 3310 -3 507 237 114 0 chr17 10470013 10470144 -79034409 + MER96 DNA MER1_type? 3 148 -27 248 229 93 73 chr17 10470365 10470570 -79033983 + Charlie8 DNA MER1_type 117 1415 -1002 606 291 44 60 chr17 10470602 10471035 -79033518 + LTR16B LTR ERVL 36 461 -3 1363 214 4 4 chr17 10471510 10471791 -79032762 + L1 LINE L1 4958 5238 -908 401 250 0 20 chr17 10472164 10472264 -79032289 - MIR SINE MIR -88 120 23 375 207 43 24 chr17 10472336 10472500 -79032053 + CT-rich Low_complexity Low_complexity 3 169 0 616 240 139 35 chr17 10472948 10473062 -79031491 + L1ME4a LINE L1 5715 5816 -305 2308 76 31 0 chr17 10473062 10473350 -79031203 + AluSq SINE Alu 1 297 -16 616 240 139 35 chr17 10473350 10473601 -79030952 + L1ME4a LINE L1 5816 6118 -3 277 95 0 0 chr17 10473621 10473663 -79030890 + MADE1 DNA Mariner 3 44 -36 3138 156 44 29 chr17 10474019 10474304 -79030249 - MER7C DNA MER2_type -2427 601 322 2361 102 0 7 chr17 10474304 10474609 -79029944 + AluSx SINE Alu 1 303 -9 3138 156 44 29 chr17 10474609 10474913 -79029640 - MER7C DNA MER2_type -2706 322 3 462 248 35 9 chr17 10475957 10476070 -79028483 + MIR SINE MIR 5 120 -142 399 218 65 17 chr17 10476086 10476314 -79028239 + L2 LINE L2 2997 3310 -3 287 292 106 0 chr17 10476309 10476422 -79028131 + MIR SINE MIR 138 262 0 * 450 267 18 61 chr17 10476549 10476640 -79027913 - Charlie8 DNA MER1_type -175 166 84 2275 96 3 7 chr17 10476640 10476941 -79027612 + AluSg SINE Alu 11 310 0 450 267 18 61 chr17 10476941 10477014 -79027539 - Charlie8 DNA MER1_type -257 84 9 1663 111 40 28 chr17 10477357 10477610 -79026943 - AluSx SINE Alu -22 290 35 2296 117 3 0 chr17 10477872 10478179 -79026374 - AluSg SINE Alu 0 310 3 808 271 92 0 chr17 10479327 10479589 -79024964 + L2 LINE L2 2383 2668 -646 736 281 242 10 chr17 10479875 10480263 -79024290 + L2 LINE L2 2836 3313 0 2086 117 0 0 chr17 10480269 10480542 -79024011 + AluSx SINE Alu 1 273 -39 180 0 0 0 chr17 10480542 10480562 -79023991 + (TC)n Simple_repeat Simple_repeat 2 21 0 205 274 0 16 chr17 10481561 10481623 -79022930 - MIR SINE MIR -61 147 87 180 298 24 24 chr17 10482700 10482784 -79021769 - MIR3 SINE MIR -35 173 90 942 230 123 14 chr17 10483175 10483532 -79021021 + L1ME2 LINE L1 5760 6155 -9 2281 101 0 0 chr17 10484584 10484872 -79019681 - AluY SINE Alu -23 288 1 415 301 27 60 chr17 10488657 10488840 -79015713 - MIR SINE MIR -35 227 51 225 313 0 0 chr17 10489758 10489822 -79014731 - MIR SINE MIR -163 99 36 423 0 0 0 chr17 10490317 10490364 -79014189 + (TG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr17 10490530 10490551 -79014002 + (TG)n Simple_repeat Simple_repeat 1 21 0 284 326 10 0 chr17 10490884 10490982 -79013571 + MER5A DNA MER1_type 11 109 -80 2194 82 0 0 chr17 10491497 10491765 -79012788 - AluSg SINE Alu -5 305 38 759 233 18 54 chr17 10491974 10492025 -79012528 + MIR SINE MIR 5 56 -206 2647 43 0 0 chr17 10492025 10492324 -79012229 + AluY SINE Alu 1 299 -12 759 233 18 54 chr17 10492324 10492495 -79012058 + MIR SINE MIR 56 219 -43 348 64 0 0 chr17 10492530 10492577 -79011976 + (ATG)n Simple_repeat Simple_repeat 2 48 0 420 299 108 5 chr17 10492687 10492901 -79011652 + MIR SINE MIR 8 243 -19 2391 107 0 0 chr17 10493244 10493554 -79010999 - AluSg SINE Alu 0 310 1 188 119 0 24 chr17 10493565 10493607 -79010946 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 211 278 0 0 chr17 10493692 10493764 -79010789 + A-rich Low_complexity Low_complexity 1 72 0 512 288 128 44 chr17 10493839 10494405 -79010148 + L1MC4a LINE L1 5320 5819 -302 1770 163 17 10 chr17 10494530 10494819 -79009734 - AluJo SINE Alu -21 291 1 22 35 0 0 chr17 10494825 10494854 -79009699 + AT_rich Low_complexity Low_complexity 1 29 0 387 125 8 125 chr17 10497427 10497514 -79007039 - L1MA8 LINE L1 -22 6269 6198 2180 95 58 0 chr17 10497514 10497634 -79006919 + AluSx SINE Alu 1 113 -199 420 20 0 0 chr17 10497634 10497683 -79006870 + (CA)n Simple_repeat Simple_repeat 2 50 0 2180 95 58 0 chr17 10497683 10497857 -79006696 + AluSx SINE Alu 113 312 0 387 125 8 125 chr17 10497857 10497889 -79006664 - L1MA8 LINE L1 -93 6198 6164 299 319 87 36 chr17 10497914 10498052 -79006501 + L2 LINE L2 3125 3269 -3 184 301 205 0 chr17 10498083 10498166 -79006387 - L2 LINE L2 -19 3253 3154 2414 48 0 34 chr17 10498443 10498769 -79005784 - AluY SINE Alu 0 316 1 282 319 88 9 chr17 10499574 10499687 -79004866 - MER5A DNA MER1_type -1 188 67 2445 85 0 10 chr17 10499816 10500123 -79004430 - AluY SINE Alu -6 305 2 611 245 80 11 chr17 10500389 10500577 -79003976 - MER112 DNA MER1_type 0 260 60 537 270 15 7 chr17 10500662 10500799 -79003754 - MIR3 SINE MIR -41 167 30 2502 81 0 0 chr17 10502542 10502840 -79001713 - AluSc SINE Alu -11 298 1 346 211 77 67 chr17 10503085 10503189 -79001364 - L2 LINE L2 -1 3271 3167 2227 96 0 0 chr17 10503238 10503571 -79000982 + AluY SINE Alu 1 333 0 1337 182 128 66 chr17 10503756 10503908 -79000645 - MER63B DNA MER1_type -630 432 291 1906 166 0 16 chr17 10503908 10504221 -79000332 + AluJo SINE Alu 1 308 -4 1337 182 128 66 chr17 10504221 10504475 -79000078 - MER63B DNA MER1_type -771 291 1 2057 131 6 38 chr17 10505075 10505395 -78999158 - AluSx SINE Alu -2 310 1 556 287 76 9 chr17 10506308 10506531 -78998022 + L1M4 LINE L1 4793 5030 -1116 223 250 10 104 chr17 10508154 10508250 -78996303 + L3 LINE CR1 1491 1577 0 3287 153 6 65 chr17 10508255 10508405 -78996148 - L1MB5 LINE L1 0 6174 6017 1459 187 35 81 chr17 10508405 10508572 -78995981 + MLT1B LTR MaLR 4 177 -213 1734 112 138 11 chr17 10508572 10508841 -78995712 + AluSg SINE Alu 1 303 -7 1459 187 35 81 chr17 10508841 10509079 -78995474 + MLT1B LTR MaLR 177 390 0 3287 153 6 65 chr17 10509079 10509621 -78994932 - L1MB5 LINE L1 -157 6017 5523 2310 86 3 0 chr17 10509962 10510254 -78994299 - AluSg SINE Alu -17 293 1 282 204 0 0 chr17 10510685 10510734 -78993819 + L2 LINE L2 3265 3313 0 188 259 0 69 chr17 10510720 10510778 -78993775 + MIR SINE MIR 91 144 -118 * 250 167 0 0 chr17 10512186 10512228 -78992325 + 5S rRNA rRNA 1 42 -79 2283 116 0 3 chr17 10512318 10512621 -78991932 + AluSx SINE Alu 1 302 -10 245 246 0 14 chr17 10512673 10512742 -78991811 + (TG)n Simple_repeat Simple_repeat 1 68 0 845 243 66 12 chr17 10513086 10513345 -78991208 - Charlie8 DNA MER1_type -2141 276 4 22 35 0 0 chr17 10513394 10513423 -78991130 + GC_rich Low_complexity Low_complexity 1 29 0 513 264 50 28 chr17 10514160 10514342 -78990211 + MIR SINE MIR 75 260 -2 23 68 0 0 chr17 10514426 10514470 -78990083 + AT_rich Low_complexity Low_complexity 1 44 0 186 294 206 0 chr17 10514743 10514869 -78989684 + MIR3 SINE MIR 46 197 -11 296 367 42 0 chr17 10515651 10515771 -78988782 + L2 LINE L2 2707 2831 -483 2071 116 0 50 chr17 10516036 10516339 -78988214 + AluSx SINE Alu 1 288 -24 439 160 13 0 chr17 10516412 10516487 -78988066 - L1MB7 LINE L1 -54 6130 6055 734 171 0 46 chr17 10516588 10516763 -78987790 - L1MB3 LINE L1 0 6183 6017 369 277 61 7 chr17 10516780 10516928 -78987625 - MIR3 SINE MIR -6 202 47 597 307 60 52 chr17 10517491 10517810 -78986743 + L1ME4a LINE L1 5514 5838 -283 2146 87 3 62 chr17 10517810 10518131 -78986422 + AluSp SINE Alu 1 302 -11 597 307 60 52 chr17 10518131 10518192 -78986361 + L1ME4a LINE L1 5838 5897 -224 1859 152 56 9 chr17 10518234 10518576 -78985977 + Tigger2 DNA MER2_type 2361 2718 0 2410 95 0 0 chr17 10518750 10519045 -78985508 + AluSg SINE Alu 1 295 -15 586 248 56 87 chr17 10519557 10519823 -78984730 - Charlie8 DNA MER1_type -2159 258 1 619 161 0 15 chr17 10520089 10520219 -78984334 + CT-rich Low_complexity Low_complexity 1 128 0 2140 120 3 7 chr17 10520219 10520511 -78984042 - AluSx SINE Alu -21 291 1 1754 174 14 17 chr17 10520572 10520860 -78983693 + AluJb SINE Alu 1 287 -25 2316 96 0 0 chr17 10520923 10521215 -78983338 + AluSg SINE Alu 1 292 -18 2504 76 3 13 chr17 10521822 10522137 -78982416 + AluSp SINE Alu 1 312 -1 493 158 278 0 chr17 10522459 10522592 -78981961 - MER5A DNA MER1_type -16 173 4 3845 97 3 15 chr17 10522712 10522739 -78981814 + L1PA13 LINE L1 5320 5346 -817 2476 86 0 3 chr17 10522739 10523040 -78981513 - AluSq SINE Alu -13 300 1 3845 97 3 15 chr17 10523040 10523600 -78980953 + L1PA13 LINE L1 5346 5900 -263 381 237 111 31 chr17 10523803 10523962 -78980591 - MIR SINE MIR -20 242 64 273 329 36 29 chr17 10524106 10524243 -78980310 + L2 LINE L2 3165 3302 -11 1109 177 13 44 chr17 10524928 10525154 -78979399 + MER20 DNA MER1_type 1 219 0 322 219 178 11 chr17 10525324 10525464 -78979089 - MIR3 SINE MIR -49 159 1 1200 187 9 27 chr17 10525758 10525983 -78978570 - MIR SINE MIR -31 231 11 329 217 87 11 chr17 10527367 10527459 -78977094 + MIR SINE MIR 30 128 -80 242 338 30 38 chr17 10527472 10527605 -78976948 - MER5A DNA MER1_type -6 183 52 373 204 135 9 chr17 10528223 10528340 -78976213 + MIR SINE MIR 18 149 -68 641 251 100 56 chr17 10528349 10528580 -78975973 - MIR SINE MIR -20 242 2 2349 112 0 0 chr17 10530527 10530830 -78973723 - AluSx SINE Alu -9 303 1 319 261 50 50 chr17 10531209 10531287 -78973266 + MIR SINE MIR 74 151 -111 301 292 23 46 chr17 10531287 10531417 -78973136 - MER5A DNA MER1_type 0 189 63 478 285 85 28 chr17 10531980 10532213 -78972340 - MIR SINE MIR -14 248 6 690 240 167 17 chr17 10532557 10532580 -78971973 + L1MC4 LINE L1 6683 6701 -1341 278 49 0 24 chr17 10532580 10532621 -78971932 + (CA)n Simple_repeat Simple_repeat 2 41 0 690 240 167 17 chr17 10532621 10532884 -78971669 + L1MC4 LINE L1 6701 7012 -1030 515 289 44 42 chr17 10532888 10533465 -78971088 + L1MD3 LINE L1 7074 7749 -246 * 1559 146 134 12 chr17 10533460 10533803 -78970750 + L1MB8 LINE L1 5784 6168 -10 744 222 21 7 chr17 10533928 10534072 -78970481 + FRAM SINE Alu 1 146 -30 449 244 88 66 chr17 10534075 10534420 -78970133 + L1MC5 LINE L1 7603 7917 -44 426 271 134 71 chr17 10534699 10535206 -78969347 + L2 LINE L2 2730 3270 -2 4321 69 21 0 chr17 10535468 10536033 -78968520 + L1PA8 LINE L1 5596 6172 0 2554 59 0 0 chr17 10536335 10536638 -78967915 - AluY SINE Alu -8 303 1 195 293 158 37 chr17 10536704 10536786 -78967767 + MIR SINE MIR 19 110 -98 771 210 0 36 chr17 10537053 10537220 -78967333 + FAM SINE Alu 1 161 -14 21 36 0 0 chr17 10537513 10537541 -78967012 + AT_rich Low_complexity Low_complexity 1 28 0 247 185 99 12 chr17 10537553 10537634 -78966919 - L1ME4a LINE L1 -13 6108 6021 714 237 40 6 chr17 10537637 10537814 -78966739 - MER20 DNA MER1_type 0 219 37 671 287 62 29 chr17 10537823 10538164 -78966389 - L1ME4a LINE L1 -90 6031 5680 462 305 24 42 chr17 10538658 10538825 -78965728 + MER5A DNA MER1_type 17 180 -9 296 164 0 14 chr17 10539145 10539218 -78965335 + (CAT)n Simple_repeat Simple_repeat 3 74 0 2218 92 0 7 chr17 10540688 10540971 -78963582 + AluSq SINE Alu 1 281 -32 230 0 33 0 chr17 10540973 10541003 -78963550 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 330 286 20 0 chr17 10541087 10541185 -78963368 + MER63 DNA MER1_type 27 752 -84 300 300 31 71 chr17 10541220 10541398 -78963155 + MIR SINE MIR 32 198 -62 901 117 0 36 chr17 10541455 10541592 -78962961 + FLAM_C SINE Alu 1 132 -1 1580 177 10 31 chr17 10541619 10541913 -78962640 + AluJb SINE Alu 1 288 -24 251 295 37 69 chr17 10542962 10543454 -78961099 + L1M4 LINE L1 2703 3178 -2968 2415 72 3 0 chr17 10543597 10543888 -78960665 - AluSx SINE Alu -14 298 7 2111 112 10 3 chr17 10545413 10545717 -78958836 + AluSq SINE Alu 1 306 -7 272 235 23 15 chr17 10545763 10545895 -78958658 + CT-rich Low_complexity Low_complexity 1 133 0 1011 228 37 0 chr17 10547285 10547526 -78957027 + L1MD3 LINE L1 7723 7972 -23 639 241 14 0 chr17 10547543 10547688 -78956865 - MER3 DNA MER1_type -62 147 1 1825 178 7 10 chr17 10548271 10548569 -78955984 + AluJb SINE Alu 1 297 -15 224 284 45 0 chr17 10548612 10548679 -78955874 - MIR3 SINE MIR -54 154 85 1396 168 40 94 chr17 10548728 10549025 -78955528 + AluJb SINE Alu 9 289 -23 323 213 12 38 chr17 10549030 10549110 -78955443 - HsTC2 DNA Tc2 -1813 85 8 1076 168 20 5 chr17 10549220 10549417 -78955136 - MER20 DNA MER1_type -2 217 18 280 242 0 0 chr17 10549481 10549543 -78955010 + MER103 DNA DNA 39 100 -66 39 0 0 0 chr17 10550395 10550434 -78954119 + AT_rich Low_complexity Low_complexity 1 39 0 293 250 33 0 chr17 10550610 10550702 -78953851 - HAL1b LINE L1 -428 920 826 445 295 68 53 chr17 10551007 10551214 -78953339 - L2 LINE L2 -41 3231 3022 409 304 138 12 chr17 10551276 10551350 -78953203 - L3 LINE CR1 -10 1567 1504 2101 142 3 0 chr17 10551350 10551660 -78952893 + AluSx SINE Alu 1 311 -1 409 304 138 12 chr17 10551660 10551825 -78952728 - L3 LINE CR1 -73 1504 1298 2261 92 3 0 chr17 10552835 10553235 -78951318 + AluSx SINE Alu 1 401 0 376 236 71 11 chr17 10553316 10553471 -78951082 - HAL1b LINE L1 -4 6117 1194 1960 160 0 3 chr17 10553550 10553843 -78950710 + AluJb SINE Alu 3 294 -18 2256 116 3 3 chr17 10553845 10554155 -78950398 + AluSx SINE Alu 1 310 -2 589 238 33 55 chr17 10554191 10554372 -78950181 + MIR SINE MIR 2 178 -84 422 308 14 28 chr17 10554503 10554646 -78949907 + MIR3 SINE MIR 45 185 -23 476 313 48 6 chr17 10554965 10555131 -78949422 + MIR SINE MIR 69 241 -21 612 248 130 36 chr17 10555974 10556305 -78948248 + LTR16A LTR ERVL 83 444 -6 198 0 0 0 chr17 10557224 10557246 -78947307 + (CAGGC)n Simple_repeat Simple_repeat 4 25 0 698 175 75 0 chr17 10557846 10557966 -78946587 + FLAM_A SINE Alu 1 129 -4 26 0 0 0 chr17 10558069 10558095 -78946458 + AT_rich Low_complexity Low_complexity 1 26 0 853 114 0 0 chr17 10558924 10559038 -78945515 + AluSg/x SINE Alu 180 293 -19 240 236 28 28 chr17 10559154 10559185 -78945368 - MIR SINE MIR -82 180 150 2262 76 48 3 chr17 10559185 10559475 -78945078 - AluY SINE Alu -8 303 1 240 236 28 28 chr17 10559475 10559515 -78945038 - MIR SINE MIR -111 151 109 470 217 58 25 chr17 10559681 10559801 -78944752 - L2 LINE L2 -2 3311 3188 825 277 84 28 chr17 10559931 10560098 -78944455 - L2 LINE L2 -126 3187 3031 1670 246 87 12 chr17 10560098 10560328 -78944225 - MLT1F LTR MaLR 0 542 331 2561 69 0 0 chr17 10560328 10560633 -78943920 + AluY SINE Alu 1 305 -6 1670 246 87 12 chr17 10560633 10560906 -78943647 - MLT1F LTR MaLR -211 331 1 825 277 84 28 chr17 10560906 10561095 -78943458 - L2 LINE L2 -282 3031 2811 410 196 10 8 chr17 10561109 10561213 -78943340 + MER5A DNA MER1_type 1 185 -4 372 290 117 42 chr17 10561214 10561428 -78943125 + MIR SINE MIR 14 243 -19 232 305 30 73 chr17 10562272 10562436 -78942117 + MER5A DNA MER1_type 3 159 -30 * 322 291 58 29 chr17 10562297 10562452 -78942101 - MER5A DNA MER1_type -6 172 7 38 22 0 0 chr17 10562903 10562948 -78941605 + AT_rich Low_complexity Low_complexity 1 45 0 7168 17 0 0 chr17 10562948 10563788 -78940765 - L1PA3 LINE L1 -4 6151 5312 * 11628 26 1 1 chr17 10563779 10565203 -78939350 + L1PA3 LINE L1 3899 5323 -823 438 274 20 68 chr17 10565819 10565965 -78938588 + L1MC/D LINE L1 5318 5456 -2352 312 288 194 29 chr17 10566040 10566210 -78938343 + L1MC/D LINE L1 5564 5761 -2047 3953 40 22 4 chr17 10566425 10566920 -78937633 + L1PA4 LINE L1 5652 6155 0 219 220 0 0 chr17 10566924 10566974 -78937579 + (TA)n Simple_repeat Simple_repeat 1 50 0 2437 88 0 3 chr17 10566974 10567280 -78937273 - AluSx SINE Alu -7 305 1 389 279 153 87 chr17 10567338 10567796 -78936757 + L1M4 LINE L1 4762 5249 -897 4081 198 62 5 chr17 10567800 10568613 -78935940 - MER21B LTR ERV1 -1 862 4 657 121 30 68 chr17 10568845 10568977 -78935576 + FLAM_C SINE Alu 17 143 0 188 188 42 0 chr17 10569018 10569066 -78935487 + GA-rich Low_complexity Low_complexity 5 54 0 2266 122 0 0 chr17 10569576 10569871 -78934682 + AluSx SINE Alu 1 295 -17 352 164 33 0 chr17 10570328 10570389 -78934164 - MER5A DNA MER1_type -1 188 126 1061 169 0 0 chr17 10570492 10570658 -78933895 - MER5A DNA MER1_type -23 166 1 313 233 67 8 chr17 10571649 10571769 -78932784 - L1ME4a LINE L1 0 6121 5995 239 237 102 0 chr17 10571912 10571971 -78932582 - MIR3 SINE MIR -22 186 122 1585 184 103 56 chr17 10572426 10572751 -78931802 - MLT1C LTR MaLR 0 467 114 4938 42 0 0 chr17 10572751 10573330 -78931223 - L1PA5 LINE L1 0 6154 5576 1585 184 103 56 chr17 10573330 10573450 -78931103 - MLT1C LTR MaLR -353 114 1 2205 98 0 0 chr17 10575070 10575345 -78929208 + AluSg SINE Alu 1 275 -35 192 40 0 0 chr17 10575346 10575371 -78929182 + (TC)n Simple_repeat Simple_repeat 2 26 0 450 293 0 0 chr17 10575375 10575542 -78929011 + (CATG)n Simple_repeat Simple_repeat 2 168 0 274 259 0 0 chr17 10575542 10575596 -78928957 + (TG)n Simple_repeat Simple_repeat 1 54 0 321 250 14 0 chr17 10575604 10575676 -78928877 - L1MCa LINE L1 -4358 2068 1996 * 339 211 56 0 chr17 10575649 10575720 -78928833 - L1MC4 LINE L1 -1339 6983 6909 486 279 32 7 chr17 10575868 10576022 -78928531 - Charlie8 DNA MER1_type -2206 211 54 180 333 0 0 chr17 10576553 10576601 -78927952 + L2 LINE L2 3189 3236 -77 2705 55 0 0 chr17 10576658 10576969 -78927584 - AluY SINE Alu 0 311 1 2423 84 3 6 chr17 10577683 10577994 -78926559 + AluSx SINE Alu 1 310 -2 2648 183 34 21 chr17 10578051 10578610 -78925943 - L1MB7 LINE L1 0 6184 5619 204 125 0 0 chr17 10579126 10579158 -78925395 + (CA)n Simple_repeat Simple_repeat 1 32 0 2754 3 7 3 chr17 10579379 10579677 -78924876 + AluYa5 SINE Alu 1 299 -12 894 135 14 14 chr17 10579900 10580041 -78924512 + FLAM_C SINE Alu 3 143 0 479 253 0 0 chr17 10580064 10580147 -78924406 + AluJb SINE Alu 135 217 -95 25 0 0 0 chr17 10580148 10580173 -78924380 + AT_rich Low_complexity Low_complexity 1 25 0 258 372 9 18 chr17 10580366 10580479 -78924074 + MIR SINE MIR 40 151 -57 2384 77 0 10 chr17 10580482 10580792 -78923761 - AluY SINE Alu -4 307 1 435 193 12 0 chr17 10580810 10580892 -78923661 - MER58A DNA MER1_type 0 224 142 1353 168 8 0 chr17 10580892 10581136 -78923417 - Tigger5 DNA MER2_type 0 2323 2078 346 181 108 12 chr17 10581132 10581215 -78923338 - Tigger5 DNA MER2_type -2232 91 1 * 724 199 7 27 chr17 10581215 10581361 -78923192 - MER58A DNA MER1_type 0 143 1 2498 70 7 0 chr17 10582035 10582335 -78922218 + AluSp SINE Alu 1 302 -11 2084 142 3 0 chr17 10582624 10582927 -78921626 - AluJb SINE Alu -8 304 1 1597 198 39 36 chr17 10583015 10583161 -78921392 + MLT1A1 LTR MaLR 6 150 -215 2477 81 0 3 chr17 10583161 10583471 -78921082 + AluY SINE Alu 1 309 -2 1597 198 39 36 chr17 10583471 10583683 -78920870 + MLT1A1 LTR MaLR 150 365 0 273 365 60 35 chr17 10584959 10585159 -78919394 + L2 LINE L2 3030 3234 -38 2195 92 0 7 chr17 10585213 10585522 -78919031 + AluSc SINE Alu 1 307 0 408 290 57 73 chr17 10586170 10586415 -78918138 + L2 LINE L2 3030 3270 -2 2537 63 0 0 chr17 10586444 10586744 -78917809 + AluY SINE Alu 1 300 -11 1455 143 39 130 chr17 10586835 10586995 -78917558 + AluJb SINE Alu 1 121 -191 1689 160 32 11 chr17 10586995 10587092 -78917461 + AluJb SINE Alu 24 117 -195 414 0 0 0 chr17 10587092 10587138 -78917415 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1689 160 32 11 chr17 10587138 10587322 -78917231 + AluJb SINE Alu 117 311 -1 1455 143 39 130 chr17 10587322 10587469 -78917084 + AluJb SINE Alu 121 280 -32 435 19 0 0 chr17 10587469 10587521 -78917032 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 2332 88 3 13 chr17 10587664 10587969 -78916584 - AluSx SINE Alu -10 302 1 1084 239 4 0 chr17 10587969 10588195 -78916358 + MER58B DNA MER1_type 115 341 0 357 347 75 6 chr17 10588324 10588497 -78916056 + L1MC4a LINE L1 5749 5933 -1875 2346 105 0 3 chr17 10590970 10591283 -78913270 + AluSx SINE Alu 1 312 0 255 281 37 0 chr17 10591302 10591384 -78913169 + L1ME4a LINE L1 6009 6093 -28 207 204 0 0 chr17 10592163 10592207 -78912346 + (CGTG)n Simple_repeat Simple_repeat 1 44 0 1983 145 17 3 chr17 10592316 10592613 -78911940 + AluJo SINE Alu 1 301 -11 203 343 96 30 chr17 10592851 10593049 -78911504 + MIR SINE MIR 40 250 -12 2115 196 86 10 chr17 10593675 10594174 -78910379 + L1MB5 LINE L1 5638 6174 0 2431 109 0 0 chr17 10594182 10594494 -78910059 + AluSx SINE Alu 1 312 0 332 269 141 51 chr17 10594917 10595073 -78909480 - MER91A DNA MER1_type -18 178 9 407 300 67 33 chr17 10595250 10595430 -78909123 - MIR SINE MIR -1 261 76 789 163 0 8 chr17 10595466 10595584 -78908969 + FLAM_C SINE Alu 6 123 -16 198 0 0 0 chr17 10595584 10595606 -78908947 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 275 174 81 70 chr17 10595994 10596080 -78908473 + MER5A DNA MER1_type 1 87 -102 182 282 90 51 chr17 10597485 10597563 -78906990 + L2 LINE L2 3153 3233 -39 393 22 0 0 chr17 10597563 10597609 -78906944 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 939 199 49 135 chr17 10597764 10598091 -78906462 + MLT1A1 LTR MaLR 1 292 -73 1221 163 65 108 chr17 10598091 10598219 -78906334 + AluJo SINE Alu 1 133 -179 2281 86 6 65 chr17 10598219 10598543 -78906010 - AluSc SINE Alu -4 305 1 1221 163 65 108 chr17 10598543 10598720 -78905833 + AluJo SINE Alu 133 293 -19 939 199 49 135 chr17 10598720 10598778 -78905775 + MLT1A1 LTR MaLR 292 353 -12 301 267 139 64 chr17 10598908 10599110 -78905443 + HAL1 LINE L1 945 1161 -1346 260 320 135 36 chr17 10599414 10599777 -78904776 + HAL1b LINE L1 309 707 -641 1879 180 7 0 chr17 10599912 10600217 -78904336 + AluSx SINE Alu 1 307 -5 372 191 176 37 chr17 10602780 10602916 -78901637 + MIR3 SINE MIR 20 174 -34 426 269 90 28 chr17 10604474 10604619 -78899934 + MIR3 SINE MIR 23 176 -32 2318 91 7 0 chr17 10604653 10604949 -78899604 - AluSx SINE Alu -14 298 1 375 290 219 0 chr17 10605630 10605785 -78898768 + MER5A DNA MER1_type 1 189 0 210 245 0 20 chr17 10607305 10607354 -78897199 + (CCCCAG)n Simple_repeat Simple_repeat 2 49 0 443 266 104 72 chr17 10607932 10608154 -78896399 + MIR SINE MIR 34 262 0 2064 156 84 57 chr17 10608217 10608416 -78896137 + L1MB3 LINE L1 5286 5478 -702 1958 143 31 3 chr17 10608416 10608710 -78895843 + AluSx SINE Alu 1 302 -10 2064 156 84 57 chr17 10608710 10609036 -78895517 + L1MB3 LINE L1 5478 5825 -355 1446 81 0 0 chr17 10609036 10609209 -78895344 - AluSg/x SINE Alu -8 302 130 1727 208 6 8 chr17 10609209 10609575 -78894978 + L1MB3 LINE L1 5819 6183 0 2218 128 0 3 chr17 10609740 10610044 -78894509 + AluSx SINE Alu 1 303 -9 477 264 29 21 chr17 10610397 10610537 -78894016 - MIR SINE MIR -16 246 106 2249 123 7 0 chr17 10611220 10611530 -78893023 + AluSx SINE Alu 1 312 0 2281 121 7 0 chr17 10612355 10612661 -78891892 + AluSg SINE Alu 1 308 -2 1170 170 33 37 chr17 10613732 10613973 -78890580 - Tigger2 DNA MER2_type -10 2708 2469 1671 147 12 78 chr17 10613973 10614307 -78890246 + AluJb SINE Alu 1 312 0 3805 165 42 8 chr17 10614377 10615098 -78889455 - Tigger2 DNA MER2_type -1973 745 1 2244 83 45 0 chr17 10615113 10615401 -78889152 + AluY SINE Alu 1 301 -10 2330 103 0 0 chr17 10615755 10616045 -78888508 + AluSx SINE Alu 1 290 -22 270 247 10 41 chr17 10616144 10616241 -78888312 + MER113 DNA MER1_type? 15 108 -413 2257 114 3 0 chr17 10616798 10617106 -78887447 + AluSg SINE Alu 2 310 0 624 62 0 0 chr17 10617111 10617192 -78887361 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 311 0 0 25 chr17 10617202 10617242 -78887311 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr17 10618292 10618327 -78886226 + AT_rich Low_complexity Low_complexity 1 35 0 2048 116 0 50 chr17 10618360 10618678 -78885875 + AluSx SINE Alu 1 302 -10 352 167 115 0 chr17 10618778 10618856 -78885697 + L2 LINE L2 3187 3273 -40 44 35 0 0 chr17 10619873 10619931 -78884622 + AT_rich Low_complexity Low_complexity 1 58 0 2559 77 0 0 chr17 10619950 10620260 -78884293 - AluY SINE Alu -1 310 1 357 127 79 0 chr17 10620366 10620429 -78884124 + L1ME4a LINE L1 6039 6106 -15 378 259 12 0 chr17 10620687 10620772 -78883781 - MIR3 SINE MIR -12 196 111 355 343 80 29 chr17 10621391 10621566 -78882987 + MIR SINE MIR 52 235 -27 367 308 9 0 chr17 10671755 10671862 -78832691 - MER5A DNA MER1_type -80 109 2 662 253 116 67 chr17 10671940 10672344 -78832209 - Charlie8 DNA MER1_type -1956 461 38 413 269 85 28 chr17 10673462 10673603 -78830950 + MER112 DNA MER1_type 1 149 -111 669 161 136 8 chr17 10673903 10674021 -78830532 + AluJo SINE Alu 3 135 -177 1780 196 0 0 chr17 10674021 10674333 -78830220 + AluJo SINE Alu 1 312 0 1159 37 7 0 chr17 10674398 10674534 -78830019 + AluY SINE Alu 1 137 -174 182 36 0 36 chr17 10674534 10674562 -78829991 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 7212 77 15 11 chr17 10674566 10675625 -78828928 + SVA Other Other 2 1194 -219 2093 55 4 0 chr17 10675625 10675881 -78828672 + LTR5 LTR ERVK 1 257 -712 7212 77 15 11 chr17 10675881 10676102 -78828451 + SVA Other Other 1194 1413 0 1371 77 6 0 chr17 10676106 10676276 -78828277 + AluY SINE Alu 127 297 -14 260 308 84 9 chr17 10676616 10676723 -78827830 - MIR SINE MIR -128 134 20 344 304 32 38 chr17 10676921 10677079 -78827474 + MIR3 SINE MIR 46 202 -6 258 228 114 38 chr17 10678070 10678149 -78826404 + MIR3 SINE MIR 70 154 -54 905 233 0 0 chr17 10678464 10678640 -78825913 + L1ME LINE L1 5457 5632 -534 381 189 11 21 chr17 10678649 10678744 -78825809 + MER20 DNA MER1_type 3 96 -123 422 194 10 10 chr17 10679745 10679848 -78824705 + MER20 DNA MER1_type 117 219 0 2102 138 0 0 chr17 10680011 10680323 -78824230 + AluSx SINE Alu 1 312 0 207 204 0 0 chr17 10681074 10681123 -78823430 + (TG)n Simple_repeat Simple_repeat 1 49 0 807 236 166 78 chr17 10682167 10682649 -78821904 + MLT1K LTR MaLR 11 546 -42 1587 172 41 4 chr17 10682649 10682917 -78821636 - AluJo SINE Alu -21 291 14 807 236 166 78 chr17 10682917 10682963 -78821590 + MLT1K LTR MaLR 546 586 -2 1514 232 71 25 chr17 10683121 10683560 -78820993 - MLT1D LTR MaLR -33 472 14 2185 83 4 0 chr17 10684023 10684288 -78820265 - AluSp SINE Alu -47 266 1 783 178 0 15 chr17 10684309 10684444 -78820109 - FLAM_C SINE Alu 0 133 1 391 292 74 60 chr17 10684644 10684860 -78819693 + MIR SINE MIR 6 224 -38 2244 101 10 0 chr17 10685060 10685348 -78819205 - AluSg SINE Alu -19 291 1 2663 202 23 44 chr17 10686188 10686282 -78818271 - MER68 LTR ERV1 0 562 468 1951 131 3 31 chr17 10686282 10686572 -78817981 + AluJo SINE Alu 1 282 -30 2663 202 23 44 chr17 10686572 10687050 -78817503 - MER68 LTR ERV1 -94 468 2 298 284 73 0 chr17 10687095 10687204 -78817349 - L3 LINE CR1 -58 1519 1403 251 254 103 29 chr17 10687335 10687449 -78817104 - MIR3 SINE MIR -42 166 49 617 263 31 5 chr17 10687507 10687881 -78816672 + MER113 DNA MER1_type? 31 479 -42 2435 79 0 13 chr17 10688157 10688473 -78816080 - AluSx SINE Alu 0 312 1 531 65 39 0 chr17 10688704 10688781 -78815772 - MADE1 DNA Mariner 0 80 1 290 284 246 8 chr17 10688998 10689132 -78815421 + MIR SINE MIR 18 183 -79 244 287 0 43 chr17 10689333 10689427 -78815126 + Charlie8 DNA MER1_type 16 105 -2312 2221 106 33 0 chr17 10689452 10689567 -78814986 + AluSx SINE Alu 1 111 -201 207 0 0 0 chr17 10689567 10689590 -78814963 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2221 106 33 0 chr17 10689590 10689776 -78814777 + AluSx SINE Alu 111 312 0 361 224 102 0 chr17 10689879 10689977 -78814576 + MER5B DNA MER1_type 1 108 -70 183 139 0 0 chr17 10690701 10690737 -78813816 + (A)n Simple_repeat Simple_repeat 1 36 0 350 220 291 35 chr17 10691326 10691467 -78813086 + MER5A DNA MER1_type 12 188 -1 306 178 228 30 chr17 10691778 10691879 -78812674 - L2 LINE L2 -14 3299 3179 318 284 71 10 chr17 10692370 10692567 -78811986 + L1ME3A LINE L1 3403 3611 -2535 429 292 105 24 chr17 10692694 10692885 -78811668 + L1ME3A LINE L1 3808 3982 -2164 2280 118 3 0 chr17 10692885 10693189 -78811364 + AluSg SINE Alu 1 305 -5 429 292 105 24 chr17 10693189 10693329 -78811224 + L1ME3A LINE L1 3982 4166 -1980 1777 162 0 18 chr17 10693342 10693626 -78810927 + AluJo SINE Alu 21 299 -13 1703 173 0 18 chr17 10693626 10693904 -78810649 + AluSp SINE Alu 1 273 -40 593 192 8 51 chr17 10693915 10694280 -78810273 + GA-rich Low_complexity Low_complexity 1 349 0 234 184 0 0 chr17 10694280 10694318 -78810235 + A-rich Low_complexity Low_complexity 2 39 0 698 291 43 75 chr17 10694461 10694991 -78809562 + MER34 LTR ERV1 1 513 -29 413 264 196 43 chr17 10695067 10695556 -78808997 + HAL1 LINE L1 2 565 -1942 654 244 95 8 chr17 10695578 10695820 -78808733 + HAL1 LINE L1 1680 1942 -565 216 0 0 0 chr17 10695863 10695887 -78808666 + (TG)n Simple_repeat Simple_repeat 1 24 0 1943 160 0 0 chr17 10695887 10696201 -78808352 - AluJb SINE Alu 0 314 1 319 287 78 61 chr17 10696343 10696573 -78807980 + HAL1 LINE L1 2105 2338 -169 1272 152 14 38 chr17 10696576 10696786 -78807767 + AluJo SINE Alu 1 205 -107 317 302 70 0 chr17 10696792 10696878 -78807675 + HAL1 LINE L1 1779 1870 -637 419 198 0 0 chr17 10696881 10696962 -78807591 + AluJ/FRAM SINE Alu 216 296 -16 2640 138 99 22 chr17 10697085 10697648 -78806905 + MER4B LTR ERV1 1 903 0 4143 103 19 19 chr17 10697771 10698401 -78806152 + MER41B LTR ERV1 6 635 0 660 328 78 17 chr17 10698402 10698968 -78805585 + L1ME3A LINE L1 4475 5094 -1052 2366 81 0 7 chr17 10698968 10699263 -78805290 - AluSg SINE Alu -17 293 1 660 328 78 17 chr17 10699263 10699400 -78805153 + L1ME3A LINE L1 5094 5221 -925 703 317 111 17 chr17 10699406 10699984 -78804569 + L1ME3A LINE L1 5313 5944 -226 2420 240 66 21 chr17 10700193 10700974 -78803579 + L1ME1 LINE L1 5364 6332 -2 24 0 0 0 chr17 10701022 10701046 -78803507 + AT_rich Low_complexity Low_complexity 1 24 0 765 189 8 0 chr17 10701055 10701187 -78803366 + AluJo/FLAM SINE Alu 1 133 -169 1063 157 0 34 chr17 10701187 10701234 -78803319 + AluSg/x SINE Alu 134 181 -131 6006 0 0 0 chr17 10701234 10701870 -78802683 - LTR27 LTR ERV1 0 636 1 1063 157 0 34 chr17 10701870 10702000 -78802553 + AluSg/x SINE Alu 181 305 -7 281 218 127 45 chr17 10702131 10702241 -78802312 - MIR3 SINE MIR -9 199 81 2357 104 0 0 chr17 10702278 10702576 -78801977 - AluSq SINE Alu -15 298 1 299 245 20 20 chr17 10702949 10703047 -78801506 + LTR67 LTR ERVL 460 557 0 2573 59 0 28 chr17 10703211 10703531 -78801022 + AluY SINE Alu 1 311 0 466 304 145 5 chr17 10703543 10703757 -78800796 - MIR SINE MIR -6 256 13 1579 96 0 0 chr17 10705833 10706068 -78798485 + AluSg/x SINE Alu 86 320 0 2311 109 3 10 chr17 10706685 10706998 -78797555 + AluSx SINE Alu 1 311 -1 2281 98 0 3 chr17 10707695 10707992 -78796561 + AluSx SINE Alu 1 296 -16 266 262 37 13 chr17 10708540 10708628 -78795925 - MIR3 SINE MIR -50 158 68 234 238 85 55 chr17 10708813 10708977 -78795576 + L2 LINE L2 2537 2705 -609 1030 171 44 15 chr17 10708983 10709188 -78795365 + L1MB5 LINE L1 5925 6135 -39 2227 115 0 10 chr17 10709191 10709495 -78795058 - AluSc SINE Alu -8 301 1 1499 144 0 13 chr17 10709499 10709728 -78794825 - AluJb SINE Alu -20 292 67 863 295 169 16 chr17 10709794 10710292 -78794261 + L2 LINE L2 2728 3313 0 1640 203 119 43 chr17 10710403 10710872 -78793681 - MLT1D LTR MaLR 0 505 1 2114 79 79 0 chr17 10711105 10711383 -78793170 + AluSc SINE Alu 1 300 -9 279 337 88 33 chr17 10712155 10712267 -78792286 + MIR SINE MIR 1 128 -134 2490 87 0 0 chr17 10712267 10712577 -78791976 - AluY SINE Alu -1 310 1 279 337 88 33 chr17 10712577 10712645 -78791908 + MIR SINE MIR 128 191 -71 396 271 294 0 chr17 10712836 10713006 -78791547 + MIR SINE MIR 18 237 -25 455 72 188 0 chr17 10713201 10713270 -78791283 - AluJb SINE Alu -229 83 2 2147 93 61 0 chr17 10713353 10713631 -78790922 + AluSc SINE Alu 5 299 -10 230 290 0 0 chr17 10714655 10714724 -78789829 + MLT1K LTR MaLR 509 577 -11 189 102 122 20 chr17 10715349 10715398 -78789155 - L3 LINE CR1 -944 633 580 2358 97 0 0 chr17 10715571 10715869 -78788684 + AluSx SINE Alu 1 298 -14 2512 66 10 0 chr17 10716487 10716788 -78787765 + AluY SINE Alu 1 304 -7 250 271 157 50 chr17 10716827 10716967 -78787586 + MIR3 SINE MIR 27 181 -27 266 140 140 0 chr17 10718658 10718715 -78785838 + MLT1K LTR MaLR 378 442 -146 879 226 243 58 chr17 10718731 10718797 -78785756 - MLT1E LTR MaLR -2 591 538 848 155 0 0 chr17 10718797 10718926 -78785627 + FLAM_A SINE Alu 1 129 -4 879 226 243 58 chr17 10718926 10719358 -78785195 - MLT1E LTR MaLR -55 538 1 296 213 32 64 chr17 10719515 10719609 -78784944 + L2 LINE L2 570 660 -2654 240 35 0 0 chr17 10720015 10720044 -78784509 + (A)n Simple_repeat Simple_repeat 1 29 0 193 240 20 0 chr17 10720376 10720426 -78784127 + L2 LINE L2 764 814 -2500 341 290 0 0 chr17 10720441 10720534 -78784019 + MER5B DNA MER1_type 7 99 -79 319 227 0 53 chr17 10720787 10720862 -78783691 + MER5A DNA MER1_type 5 75 -114 1598 181 31 24 chr17 10720879 10721166 -78783387 + AluJb SINE Alu 1 289 -23 2376 98 0 13 chr17 10721353 10721668 -78782885 + AluSx SINE Alu 1 311 -1 1428 277 182 37 chr17 10721805 10722881 -78781672 + L2 LINE L2 1658 2889 -425 330 174 0 81 chr17 10722889 10722975 -78781578 - MER3 DNA MER1_type 0 209 131 640 248 47 0 chr17 10723170 10723319 -78781234 - MER3 DNA MER1_type -53 156 1 647 304 59 45 chr17 10723327 10723682 -78780871 + L2 LINE L2 2898 3257 -56 222 309 11 11 chr17 10724241 10724335 -78780218 + MER5B DNA MER1_type 8 101 -77 311 59 0 0 chr17 10724407 10724458 -78780095 - L1MA4A LINE L1 -275 6028 5978 1637 207 92 36 chr17 10724571 10725049 -78779504 + MLT1D LTR MaLR 1 505 0 710 184 26 33 chr17 10725091 10725243 -78779310 - LTR32 LTR ERVL 0 471 321 246 83 0 0 chr17 10725254 10725290 -78779263 - LTR32 LTR ERVL -119 352 317 239 111 0 0 chr17 10725297 10725333 -78779220 - LTR32 LTR ERVL -119 352 317 228 139 0 0 chr17 10725380 10725416 -78779137 - LTR32 LTR ERVL -119 352 317 259 83 0 0 chr17 10725461 10725497 -78779056 - LTR32 LTR ERVL -119 352 317 235 111 0 0 chr17 10725708 10725744 -78778809 - LTR32 LTR ERVL -119 352 317 2135 149 3 3 chr17 10725944 10726286 -78778267 - LTR32 LTR ERVL -122 349 8 367 164 15 0 chr17 10726299 10726366 -78778187 - MER46A DNA MER2_type -131 105 38 3115 146 19 46 chr17 10726407 10727128 -78777425 + L1MA4A LINE L1 4755 5471 -743 425 71 0 71 chr17 10727125 10727195 -78777358 - L1MA4 LINE L1 -406 5894 5830 * 1272 142 0 0 chr17 10727229 10727440 -78777113 + L1MA4A LINE L1 5469 5679 -624 1027 104 0 8 chr17 10727446 10727580 -78776973 + AluSq/x SINE Alu 1 133 -179 2415 87 0 0 chr17 10727583 10727883 -78776670 + AluSg SINE Alu 1 300 -10 3449 140 27 27 chr17 10727884 10728276 -78776277 + L1MA4A LINE L1 5670 6064 -239 2275 108 0 20 chr17 10728276 10728581 -78775972 - AluSx SINE Alu -13 299 1 3449 140 27 27 chr17 10728581 10728822 -78775731 + L1MA4A LINE L1 6063 6303 0 1674 131 91 7 chr17 10728928 10729062 -78775491 + AluSx SINE Alu 1 122 -190 1997 122 4 0 chr17 10729062 10729369 -78775184 + AluY SINE Alu 1 308 0 1674 131 91 7 chr17 10729369 10729507 -78775046 + AluSx SINE Alu 122 297 -15 493 240 222 0 chr17 10729744 10729915 -78774638 - MER3 DNA MER1_type 0 209 1 2252 114 3 13 chr17 10730263 10730694 -78773859 + AluSp SINE Alu 1 428 0 712 337 10 24 chr17 10730966 10731257 -78773296 + L1MC/D LINE L1 5464 5750 -2058 1965 139 0 42 chr17 10731722 10732031 -78772522 - AluJb SINE Alu -10 302 7 333 0 0 0 chr17 10732506 10732543 -78772010 + (CA)n Simple_repeat Simple_repeat 1 37 0 219 133 0 0 chr17 10732827 10732872 -78771681 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 2120 127 0 13 chr17 10733838 10734137 -78770416 + AluSx SINE Alu 1 295 -17 972 270 179 59 chr17 10734503 10734776 -78769777 - L2 LINE L2 0 3313 3074 2653 159 50 10 chr17 10734776 10735260 -78769293 - MLT1D LTR MaLR -2 503 1 972 270 179 59 chr17 10735260 10735796 -78768757 - L2 LINE L2 -239 3074 2389 199 208 0 42 chr17 10735833 10735881 -78768672 - L2 LINE L2 -1000 2314 2269 2247 107 24 0 chr17 10736238 10736536 -78768017 + AluSx SINE Alu 1 305 -7 549 247 18 120 chr17 10736796 10737079 -78767474 - L2 LINE L2 0 3313 3060 208 194 0 0 chr17 10737193 10737229 -78767324 - L2 LINE L2 -98 3215 3180 2039 103 0 4 chr17 10738278 10738551 -78766002 + AluSq SINE Alu 41 312 -1 888 247 49 21 chr17 10738885 10738908 -78765645 + MIR SINE MIR 13 34 -228 2346 92 0 19 chr17 10738908 10739225 -78765328 + AluSx SINE Alu 1 311 -1 888 247 49 21 chr17 10739225 10739444 -78765109 + MIR SINE MIR 34 262 0 1999 157 0 6 chr17 10740630 10740942 -78763611 - AluJb SINE Alu -2 310 1 706 179 13 64 chr17 10741051 10741207 -78763346 - MER5A DNA MER1_type -40 149 2 190 273 0 0 chr17 10741207 10741251 -78763302 - L3b LINE CR1 -6 1577 1534 459 225 154 115 chr17 10742413 10742443 -78762110 + L1ME4a LINE L1 5551 5578 -543 2250 93 13 19 chr17 10742443 10742754 -78761799 + AluSx SINE Alu 1 309 -3 459 225 154 115 chr17 10742754 10743045 -78761508 + L1ME4a LINE L1 5578 5890 -231 2210 118 3 25 chr17 10743045 10743359 -78761194 + AluSq SINE Alu 1 307 -6 459 225 154 115 chr17 10743359 10743392 -78761161 + L1ME4a LINE L1 5890 5920 -201 623 197 0 16 chr17 10744128 10744452 -78760101 + (CA)n Simple_repeat Simple_repeat 1 318 0 367 198 135 27 chr17 10744623 10744734 -78759819 + MIR SINE MIR 19 141 -121 2341 76 33 13 chr17 10746428 10746732 -78757821 - AluY SINE Alu -1 310 1 4160 171 25 59 chr17 10746889 10747061 -78757492 + L1MB7 LINE L1 4863 5039 -1145 1768 179 6 22 chr17 10747061 10747373 -78757180 + AluJo SINE Alu 1 307 -5 4160 171 25 59 chr17 10747373 10747701 -78756852 + L1MB7 LINE L1 5039 5377 -807 2416 88 10 0 chr17 10747701 10748006 -78756547 + AluSg SINE Alu 1 308 -2 4160 171 25 59 chr17 10748006 10748841 -78755712 + L1MB7 LINE L1 5377 6176 -8 2374 104 3 0 chr17 10749150 10749457 -78755096 + AluSx SINE Alu 1 308 -4 367 340 0 15 chr17 10749461 10749710 -78754843 + (CATG)n Simple_repeat Simple_repeat 1 245 0 1995 121 35 7 chr17 10750293 10750582 -78753971 + AluSx SINE Alu 1 297 -15 396 212 35 18 chr17 10750894 10750924 -78753629 - MER46A DNA MER2_type -2552 179 151 2211 117 13 10 chr17 10750924 10751232 -78753321 - AluSx SINE Alu -3 309 1 2621 129 61 30 chr17 10751235 10751730 -78752823 - L1MA8 LINE L1 -1 6290 5781 396 212 35 18 chr17 10751730 10751808 -78752745 - MER46A DNA MER2_type -2581 150 65 2385 65 0 7 chr17 10751835 10752129 -78752424 - AluY SINE Alu -8 303 12 1365 158 57 11 chr17 10752129 10752384 -78752169 - L1MA8 LINE L1 -513 5778 5509 2247 186 22 52 chr17 10752413 10752646 -78751907 - MER66B LTR ERV1 0 486 248 2278 102 0 3 chr17 10752646 10752941 -78751612 - AluSc SINE Alu -15 294 1 2247 186 22 52 chr17 10752941 10753208 -78751345 - MER66B LTR ERV1 -238 248 1 1313 225 132 78 chr17 10754335 10754646 -78749907 + L2 LINE L2 2494 2787 -526 1745 156 31 10 chr17 10754646 10754935 -78749618 + AluJb SINE Alu 1 295 -17 1313 225 132 78 chr17 10754935 10755345 -78749208 + L2 LINE L2 2787 3275 -38 2288 121 0 3 chr17 10755345 10755650 -78748903 - AluSp SINE Alu -9 304 1 1313 225 132 78 chr17 10755650 10755686 -78748867 + L2 LINE L2 3275 3308 -5 2459 67 0 29 chr17 10755760 10756074 -78748479 - AluY SINE Alu -6 305 1 200 150 25 113 chr17 10756127 10756207 -78748346 - MIR SINE MIR -66 196 124 2231 81 0 14 chr17 10756292 10756614 -78747939 + AluSg SINE Alu 1 318 0 209 339 0 16 chr17 10756615 10756677 -78747876 - MIR3 SINE MIR -143 65 5 265 200 13 40 chr17 10756739 10756814 -78747739 + L1M4 LINE L1 3876 3948 -2198 301 274 128 39 chr17 10757028 10757207 -78747346 + L1M4 LINE L1 4333 4527 -1619 213 264 264 14 chr17 10757275 10757415 -78747138 - MIR SINE MIR -59 203 29 1724 249 169 9 chr17 10757452 10757977 -78746576 + MLT2F LTR ERVL 1 609 -54 1701 199 10 0 chr17 10757989 10758291 -78746262 + AluJb SINE Alu 1 305 -7 183 232 0 0 chr17 10758307 10758363 -78746190 + (TG)n Simple_repeat Simple_repeat 1 56 0 2227 73 17 0 chr17 10758977 10759264 -78745289 + AluY SINE Alu 1 292 -19 429 299 32 25 chr17 10759448 10759605 -78744948 + MIR SINE MIR 31 188 -74 2353 59 42 0 chr17 10759756 10760045 -78744508 + AluY SINE Alu 1 301 -10 2076 104 59 0 chr17 10760173 10760461 -78744092 - AluSx SINE Alu -7 305 1 1833 153 37 79 chr17 10760669 10760718 -78743835 + MLT1B LTR MaLR 1 51 -339 1989 110 0 38 chr17 10760718 10761008 -78743545 + AluSx SINE Alu 21 299 -13 1833 153 37 79 chr17 10761008 10761068 -78743485 + MLT1B LTR MaLR 51 112 -278 2210 119 0 3 chr17 10761068 10761370 -78743183 + AluSq SINE Alu 1 301 -12 1833 153 37 79 chr17 10761370 10761665 -78742888 + MLT1B LTR MaLR 112 389 -1 1949 162 7 13 chr17 10762349 10762657 -78741896 - AluJo SINE Alu -6 306 1 830 211 6 0 chr17 10764273 10764439 -78740114 + MER5A DNA MER1_type 14 180 -9 2224 38 94 0 chr17 10764512 10764778 -78739775 + AluY SINE Alu 1 291 -20 225 292 82 103 chr17 10765678 10765921 -78738632 + MIR SINE MIR 20 257 -5 2031 116 20 30 chr17 10766138 10766439 -78738114 + AluSg SINE Alu 1 298 -12 2445 73 3 0 chr17 10766439 10766739 -78737814 + AluY SINE Alu 1 301 -10 2239 135 0 0 chr17 10766900 10767212 -78737341 - AluSx SINE Alu 0 312 1 2925 174 30 29 chr17 10767341 10767937 -78736616 + L1MB7 LINE L1 5573 6169 -15 269 292 11 11 chr17 10768124 10768213 -78736340 + CT-rich Low_complexity Low_complexity 1 89 0 333 0 0 0 chr17 10768225 10768262 -78736291 + (CA)n Simple_repeat Simple_repeat 2 38 0 2233 113 3 3 chr17 10768397 10768698 -78735855 - AluSx SINE Alu -11 301 1 636 173 133 27 chr17 10768736 10768886 -78735667 + MIR SINE MIR 83 248 -14 764 194 0 0 chr17 10768985 10769109 -78735444 - FLAM_A SINE Alu -5 128 5 192 40 0 0 chr17 10769130 10769155 -78735398 + (TTTTTG)n Simple_repeat Simple_repeat 3 27 0 1715 185 0 4 chr17 10769364 10769645 -78734908 - AluJo SINE Alu -22 290 11 299 261 54 36 chr17 10769767 10769878 -78734675 - MLT1K LTR MaLR -6 582 470 246 283 91 17 chr17 10770256 10770377 -78734176 - MIR3 SINE MIR -37 171 69 1852 125 20 59 chr17 10770725 10771029 -78733524 + AluSx SINE Alu 1 292 -20 2220 88 3 60 chr17 10771031 10771350 -78733203 + AluSg SINE Alu 3 303 -7 472 241 28 57 chr17 10771440 10771581 -78732972 - MIR SINE MIR -40 222 86 1356 152 4 52 chr17 10771594 10771824 -78732729 + AluJo SINE Alu 1 219 -93 29 28 0 0 chr17 10771979 10772015 -78732538 + AT_rich Low_complexity Low_complexity 1 36 0 1885 176 0 16 chr17 10772028 10772334 -78732219 + AluJb SINE Alu 3 303 -9 719 138 0 125 chr17 10772340 10772492 -78732061 + AluJo SINE Alu 1 133 -169 213 276 53 79 chr17 10772499 10772575 -78731978 - MIR SINE MIR -188 74 1 387 0 0 0 chr17 10772723 10772766 -78731787 + (CA)n Simple_repeat Simple_repeat 2 44 0 2406 74 0 7 chr17 10772828 10773125 -78731428 - AluSx SINE Alu -17 295 1 788 228 112 0 chr17 10773560 10773757 -78730796 - MIR SINE MIR -40 222 4 353 314 55 27 chr17 10774315 10774535 -78730018 + LTR33 LTR ERVL 1 226 -295 870 195 0 74 chr17 10775670 10775813 -78728740 + AluJo SINE Alu 137 264 -48 2441 74 0 10 chr17 10775813 10776122 -78728431 - AluY SINE Alu -5 306 1 870 195 0 74 chr17 10776122 10776168 -78728385 + AluJo SINE Alu 264 312 0 851 164 0 8 chr17 10776173 10776307 -78728246 + FLAM_C SINE Alu 1 133 0 262 172 130 83 chr17 10776381 10776550 -78728003 + L1MC4 LINE L1 7865 8041 -1 1850 151 0 17 chr17 10776582 10776874 -78727679 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr17 10776875 10776907 -78727646 + (TA)n Simple_repeat Simple_repeat 2 33 0 1667 253 88 49 chr17 10776924 10777593 -78726960 + L1ME3A LINE L1 5433 6127 -43 1899 158 24 0 chr17 10777596 10777888 -78726665 - AluJb SINE Alu -13 299 1 881 143 0 0 chr17 10777889 10778015 -78726538 - AluJb SINE Alu -186 126 1 547 317 55 11 chr17 10778200 10778383 -78726170 - MIR3 SINE MIR -1 207 17 871 213 6 0 chr17 10778524 10778688 -78725865 - FAM SINE Alu -9 166 2 357 24 0 0 chr17 10778746 10778788 -78725765 + (CA)n Simple_repeat Simple_repeat 1 42 0 730 289 45 42 chr17 10778805 10779137 -78725416 - MLT1K LTR MaLR -71 517 185 2610 52 0 10 chr17 10779592 10779898 -78724655 + AluY SINE Alu 1 303 -8 1474 174 36 3 chr17 10780531 10780836 -78723717 + L1MB3 LINE L1 5869 6183 0 1986 106 3 51 chr17 10780923 10781235 -78723318 - AluSx SINE Alu -15 297 1 30 0 0 0 chr17 10781235 10781265 -78723288 + AT_rich Low_complexity Low_complexity 1 30 0 351 302 128 39 chr17 10781611 10781790 -78722763 + MIR SINE MIR 68 262 0 247 227 359 16 chr17 10781832 10781960 -78722593 - MER5B DNA MER1_type 0 178 7 2459 77 0 3 chr17 10781970 10782269 -78722284 + AluSc SINE Alu 1 298 -11 989 194 0 28 chr17 10782326 10782676 -78721877 + FAM SINE Alu 1 209 0 1190 45 0 0 chr17 10782676 10782809 -78721744 + AluSq/x SINE Alu 1 133 -179 2327 91 0 25 chr17 10782812 10783131 -78721422 + AluY SINE Alu 1 311 0 2099 142 3 3 chr17 10783821 10784130 -78720423 - AluJo SINE Alu -1 311 3 320 345 45 34 chr17 10784353 10784530 -78720023 - L1ME4a LINE L1 -94 6027 5849 2502 72 23 0 chr17 10784854 10785160 -78719393 - AluSp SINE Alu 0 313 1 506 103 20 178 chr17 10785466 10785517 -78719036 - FLAM_A SINE Alu -169 142 85 1887 165 0 0 chr17 10785517 10785808 -78718745 - AluJb SINE Alu -21 291 1 506 103 20 178 chr17 10785808 10785902 -78718651 - FLAM_A SINE Alu -226 85 20 315 273 30 56 chr17 10785905 10786103 -78718450 + L1MC4a LINE L1 5695 5887 -1921 1178 209 0 8 chr17 10786222 10786456 -78718097 - MER106A DNA MER1_type -4 232 1 2421 81 3 0 chr17 10786500 10786795 -78717758 + AluSg SINE Alu 1 296 -14 2102 99 35 3 chr17 10786805 10787087 -78717466 + AluSg SINE Alu 1 291 -19 2499 230 120 43 chr17 10787415 10788575 -78715978 + L2 LINE L2 2035 3311 -2 310 221 197 33 chr17 10789541 10789663 -78714890 + MIR SINE MIR 70 211 -51 316 237 158 36 chr17 10790247 10790386 -78714167 + L1MCa LINE L1 1163 1318 -5108 2329 165 33 26 chr17 10790706 10791166 -78713387 + L1MB5 LINE L1 5711 6173 -1 2401 83 0 0 chr17 10791296 10791597 -78712956 + AluY SINE Alu 1 301 -10 205 280 140 28 chr17 10791870 10791977 -78712576 - L2 LINE L2 -25 3288 3170 2573 65 0 0 chr17 10792220 10792529 -78712024 + AluY SINE Alu 1 309 -2 241 296 48 64 chr17 10792640 10792666 -78711887 - L2 LINE L2 -95 3218 3193 2031 132 3 3 chr17 10792666 10792955 -78711598 - AluJb SINE Alu -23 289 1 241 296 48 64 chr17 10792955 10793053 -78711500 - L2 LINE L2 -120 3193 3096 1496 157 57 4 chr17 10793140 10793402 -78711151 - MLT1B LTR MaLR 0 390 115 246 32 0 0 chr17 10793402 10793433 -78711120 + (TTAG)n Simple_repeat Simple_repeat 2 32 0 783 180 16 0 chr17 10793480 10793608 -78710945 - AluJb SINE Alu -181 131 2 567 146 45 9 chr17 10793612 10793722 -78710831 - MLT1B LTR MaLR -272 118 5 29 0 0 0 chr17 10843982 10844011 -78660542 + AT_rich Low_complexity Low_complexity 1 29 0 2100 103 0 38 chr17 10844221 10844540 -78660013 - AluSc SINE Alu -2 307 1 512 97 0 14 chr17 10845094 10845166 -78659387 + AluJb SINE Alu 40 110 -202 1599 142 0 53 chr17 10845216 10845497 -78659056 + AluJb SINE Alu 40 305 -7 23 0 0 0 chr17 10845660 10845683 -78658870 + AT_rich Low_complexity Low_complexity 1 23 0 2569 41 3 0 chr17 10846048 10846339 -78658214 - AluY SINE Alu -19 292 1 1297 112 66 5 chr17 10846703 10846900 -78657653 + MER46A DNA MER2_type 27 235 -1 426 304 53 24 chr17 10847076 10847283 -78657270 - MLT1K LTR MaLR 0 588 376 747 261 62 55 chr17 10847343 10847600 -78656953 - MLT1K LTR MaLR -328 260 2 287 163 0 0 chr17 10847631 10847680 -78656873 - MER103 DNA DNA -44 122 74 874 154 23 0 chr17 10848773 10848903 -78655650 + FLAM_A SINE Alu 1 133 0 673 283 54 75 chr17 10850417 10850858 -78653695 - L2 LINE L2 -4 3309 2878 767 158 53 18 chr17 10851564 10851735 -78652818 - L1MD1 LINE L1 0 6242 6066 1385 118 5 25 chr17 10851895 10852129 -78652424 + AluSg/x SINE Alu 84 313 0 2560 62 7 0 chr17 10852870 10853178 -78651375 + AluSq SINE Alu 1 310 -3 457 275 56 7 chr17 10853473 10853615 -78650938 - MIR3 SINE MIR -24 184 36 1667 227 56 44 chr17 10853869 10854350 -78650203 - L2 LINE L2 -866 2448 1962 22 0 0 0 chr17 10854450 10854472 -78650081 + AT_rich Low_complexity Low_complexity 1 22 0 2277 112 0 0 chr17 10854839 10855133 -78649420 - AluSx SINE Alu -18 294 1 2018 213 57 32 chr17 10856717 10857209 -78647344 - MLT1D LTR MaLR -1 504 1 228 305 93 82 chr17 10857395 10857664 -78646889 - L2 LINE L2 -338 2976 2705 2340 104 0 0 chr17 10857719 10858016 -78646537 + AluSx SINE Alu 1 297 -15 30 45 0 0 chr17 10858017 10858061 -78646492 + AT_rich Low_complexity Low_complexity 1 44 0 1496 146 99 0 chr17 10858790 10859092 -78645461 - Charlie5 DNA MER1_type -46 2566 2235 2010 140 7 13 chr17 10859366 10859666 -78644887 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr17 10860337 10860359 -78644194 + AT_rich Low_complexity Low_complexity 1 22 0 245 233 250 31 chr17 10860457 10860685 -78643868 - L1M4 LINE L1 -854 5292 5015 481 283 72 38 chr17 10861324 10861561 -78642992 - L1M4 LINE L1 -1119 5027 4783 5096 252 67 26 chr17 10861573 10862561 -78641992 - L1M4 LINE L1 -1630 4516 3569 2245 87 10 17 chr17 10862561 10862861 -78641692 - AluSq SINE Alu -15 298 1 5096 252 67 26 chr17 10862861 10863927 -78640626 - L1M4 LINE L1 -2577 3569 2330 323 279 33 109 chr17 10863910 10863991 -78640562 + L1MC4a LINE L1 4912 4998 -1148 * 2064 78 37 0 chr17 10863991 10864298 -78640255 - AluSg SINE Alu 0 317 1 323 279 33 109 chr17 10864298 10864574 -78639979 + L1MC4a LINE L1 4998 5243 -903 2005 256 136 8 chr17 10864664 10865398 -78639155 + L1MC4a LINE L1 5351 6178 -1630 328 315 116 55 chr17 10865483 10865775 -78638778 + L1MC4a LINE L1 6309 6618 -1190 807 129 0 161 chr17 10865834 10866058 -78638495 + L1MC5 LINE L1 6756 6943 -1018 2419 91 13 0 chr17 10866060 10866368 -78638185 + AluSx SINE Alu 1 312 0 454 176 29 20 chr17 10866406 10866508 -78638045 + L1MC5 LINE L1 7808 7910 -51 22 56 0 0 chr17 10866509 10866545 -78638008 + AT_rich Low_complexity Low_complexity 1 36 0 502 274 52 48 chr17 10866582 10866716 -78637837 - L1MEc LINE L1 -3930 2466 2334 2329 94 0 7 chr17 10866716 10867024 -78637529 - AluSx SINE Alu -6 306 1 502 274 52 48 chr17 10867024 10867199 -78637354 - L1MEc LINE L1 -4062 2334 2156 372 310 7 13 chr17 10867219 10867374 -78637179 - L1MEc LINE L1 -4324 2072 1919 1990 79 11 8 chr17 10867710 10867975 -78636578 - AluSc SINE Alu -9 300 35 2290 105 0 0 chr17 10869027 10869322 -78635231 + AluSg SINE Alu 1 295 -15 306 266 40 24 chr17 10870411 10870535 -78634018 + MLT1K LTR MaLR 460 585 -3 807 151 0 32 chr17 10871908 10872034 -78632519 - FLAM_A SINE Alu -11 122 1 197 312 84 52 chr17 10872075 10872325 -78632228 - L2 LINE L2 -829 2485 2228 2395 96 3 0 chr17 10872605 10872906 -78631647 + AluSp SINE Alu 1 302 -11 2043 127 3 13 chr17 10873022 10873337 -78631216 - AluSx SINE Alu 0 312 1 235 326 56 11 chr17 10873846 10873935 -78630618 - L2 LINE L2 -4 3268 3176 384 189 45 0 chr17 10874997 10875108 -78629445 + GA-rich Low_complexity Low_complexity 2 117 0 2337 57 13 13 chr17 10875139 10875440 -78629113 + AluSq SINE Alu 1 301 -12 2417 141 34 18 chr17 10876247 10876631 -78627922 + MLT1B LTR MaLR 1 390 0 2317 101 0 10 chr17 10876740 10877048 -78627505 - AluSg SINE Alu -5 305 1 526 326 64 65 chr17 10877069 10877651 -78626902 + MLT1K LTR MaLR 2 582 -6 435 347 104 20 chr17 10879272 10879618 -78624935 - L2 LINE L2 0 3313 2939 2235 101 3 0 chr17 10879727 10880025 -78624528 + AluSx SINE Alu 1 299 -13 352 295 110 39 chr17 10880026 10880280 -78624273 - L2 LINE L2 -534 2780 2509 1734 146 10 17 chr17 10880335 10880630 -78623923 + AluJo SINE Alu 1 293 -19 2307 88 0 7 chr17 10880952 10881258 -78623295 - AluSp SINE Alu -9 304 1 555 292 36 18 chr17 10881476 10881644 -78622909 - MIR SINE MIR -2 260 90 248 114 0 0 chr17 10882230 10882265 -78622288 - U2 snRNA snRNA -153 35 1 843 253 150 39 chr17 10882625 10883012 -78621541 - MLT1C LTR MaLR -2 465 36 303 300 152 17 chr17 10883041 10883213 -78621340 + L2 LINE L2 2445 2659 -655 1226 184 108 54 chr17 10883213 10883582 -78620971 + MLT1B LTR MaLR 1 389 -1 303 300 152 17 chr17 10883582 10883646 -78620907 + L2 LINE L2 2659 2713 -601 189 0 0 0 chr17 10883664 10883685 -78620868 + (TCCC)n Simple_repeat Simple_repeat 3 23 0 279 216 59 20 chr17 10883844 10883946 -78620607 + L1MC5 LINE L1 7826 7931 -30 1529 179 4 8 chr17 10883947 10884215 -78620338 + AluJo SINE Alu 1 267 -45 4165 128 11 22 chr17 10884363 10884908 -78619645 - MER41B LTR ERV1 0 635 97 2450 69 0 0 chr17 10884908 10885213 -78619340 + AluY SINE Alu 1 305 -6 4165 128 11 22 chr17 10885213 10885309 -78619244 - MER41B LTR ERV1 -538 97 1 1225 128 41 0 chr17 10885676 10885872 -78618681 - LTR54 LTR ERV1 0 510 307 2018 118 0 19 chr17 10885875 10886188 -78618365 + AluSx SINE Alu 1 307 -5 1301 113 77 31 chr17 10886188 10886199 -78618354 - LTR54 LTR ERV1 -269 241 232 1558 159 20 33 chr17 10886199 10886501 -78618052 + AluJo SINE Alu 1 298 -14 1301 113 77 31 chr17 10886501 10886711 -78617842 - LTR54 LTR ERV1 -278 232 10 2219 88 3 7 chr17 10886806 10887101 -78617452 + AluSp SINE Alu 1 294 -19 2115 108 3 3 chr17 10887797 10888104 -78616449 - AluSx SINE Alu -5 307 1 287 331 129 7 chr17 10888270 10888409 -78616144 - MER5B DNA MER1_type -18 160 5 323 297 155 7 chr17 10888420 10888511 -78616042 - MER5B DNA MER1_type 0 178 102 1847 163 0 0 chr17 10888511 10888818 -78615735 - AluSx SINE Alu -5 307 1 323 297 155 7 chr17 10888818 10888881 -78615672 - MER5B DNA MER1_type -76 102 1 2092 93 0 59 chr17 10889463 10889784 -78614769 - AluSx SINE Alu -2 310 9 782 183 0 0 chr17 10890225 10890345 -78614208 - FLAM_A SINE Alu -13 120 1 2282 92 0 0 chr17 10890349 10890652 -78613901 - AluSc SINE Alu -6 303 1 1745 207 20 17 chr17 10890657 10891010 -78613543 - MLT1F LTR MaLR -62 480 127 1152 113 0 0 chr17 10891013 10891172 -78613381 - AluSp SINE Alu -18 295 137 575 225 17 8 chr17 10891181 10891301 -78613252 - MLT1F LTR MaLR -417 125 5 313 311 19 9 chr17 10891328 10891434 -78613119 + MER91A DNA MER1_type 6 112 -84 2164 97 0 0 chr17 10891462 10891752 -78612801 - AluSc SINE Alu -9 300 11 543 309 122 61 chr17 10891830 10892274 -78612279 - MLT1K LTR MaLR -8 580 110 1099 73 9 23 chr17 10892323 10892542 -78612011 + (GAAA)n Simple_repeat Simple_repeat 2 217 0 1414 195 51 48 chr17 10892635 10893030 -78611523 + MSTD LTR MaLR 1 396 0 1694 134 21 25 chr17 10893320 10893604 -78610949 - AluJo SINE Alu -19 293 11 2011 118 3 0 chr17 10893711 10893998 -78610555 + AluSx SINE Alu 5 292 -20 2213 97 3 0 chr17 10894311 10894609 -78609944 + AluSp SINE Alu 2 300 -13 309 135 0 19 chr17 10894836 10894888 -78609665 - MADE1 DNA Mariner 0 80 30 2185 100 3 3 chr17 10895194 10895505 -78609048 + AluSp SINE Alu 1 311 -2 303 240 48 39 chr17 10895603 10895681 -78608872 - MER113 DNA MER1_type? -414 107 31 2090 184 15 90 chr17 10895681 10896000 -78608553 - MLT1D LTR MaLR -2 503 240 243 0 0 0 chr17 10896006 10896033 -78608520 + (TG)n Simple_repeat Simple_repeat 2 28 0 1675 127 94 0 chr17 10896033 10896301 -78608252 - AluSx SINE Alu -5 307 11 2090 184 15 90 chr17 10896301 10896525 -78608028 - MLT1D LTR MaLR -265 240 1 303 240 48 39 chr17 10896525 10896550 -78608003 - MER113 DNA MER1_type? -490 31 3 2268 87 0 7 chr17 10896703 10897012 -78607541 + AluSc SINE Alu 3 309 0 246 323 75 30 chr17 10898481 10898614 -78605939 + MIR3 SINE MIR 3 141 -67 1881 184 52 0 chr17 10898675 10899022 -78605531 - MLT1A1 LTR MaLR 0 365 1 1813 154 0 0 chr17 10899097 10899376 -78605177 - AluSx SINE Alu -29 283 5 370 263 70 0 chr17 10900002 10900116 -78604437 + Charlie8 DNA MER1_type 41 162 -2255 * 660 143 9 36 chr17 10900114 10900226 -78604327 - Charlie3 DNA MER1_type -2601 109 1 346 287 9 9 chr17 10900231 10900346 -78604207 - L2 LINE L2 -654 2660 2546 2227 90 10 3 chr17 10900350 10900661 -78603892 + AluSp SINE Alu 1 313 0 2113 105 3 6 chr17 10901065 10901378 -78603175 - AluSx SINE Alu 0 312 1 232 304 179 9 chr17 10901382 10901494 -78603059 + L2 LINE L2 2924 3054 -218 575 192 128 0 chr17 10901567 10901692 -78602861 + MER96 DNA MER1_type? 35 175 0 2070 94 3 7 chr17 10902410 10902697 -78601856 - AluSx SINE Alu -26 286 1 439 271 63 58 chr17 10902700 10902735 -78601818 + L2 LINE L2 3106 3139 -174 2173 124 27 43 chr17 10902735 10902892 -78601661 + THE1B LTR MaLR 1 159 -205 2079 78 0 0 chr17 10902892 10903163 -78601390 - AluY SINE Alu -2 309 39 2173 124 27 43 chr17 10903163 10903375 -78601178 + THE1B LTR MaLR 159 364 0 439 271 63 58 chr17 10903375 10903546 -78601007 + L2 LINE L2 3139 3313 0 763 272 195 43 chr17 10903693 10904201 -78600352 + MLT1G1 LTR MaLR 11 595 0 754 159 8 45 chr17 10904235 10904367 -78600186 + FLAM_C SINE Alu 1 127 -6 296 315 99 33 chr17 10905350 10905531 -78599022 + MIR SINE MIR 32 224 -38 224 226 97 32 chr17 10905531 10905593 -78598960 + MIR SINE MIR 120 185 -77 1665 146 48 3 chr17 10905674 10905792 -78598761 + AluSx SINE Alu 1 112 -200 441 0 0 0 chr17 10905792 10905841 -78598712 + (CA)n Simple_repeat Simple_repeat 2 50 0 1665 146 48 3 chr17 10905841 10906016 -78598537 + AluSx SINE Alu 112 307 -5 579 236 93 80 chr17 10906118 10906343 -78598210 - MLT1L LTR MaLR -174 392 110 707 230 16 47 chr17 10906500 10906607 -78597946 - MIR SINE MIR -10 252 152 1995 104 35 0 chr17 10906607 10906895 -78597658 - AluSp SINE Alu -15 298 1 707 230 16 47 chr17 10906895 10906978 -78597575 - MIR SINE MIR -110 152 68 1632 53 0 19 chr17 10907862 10908071 -78596482 + AluY SINE Alu 97 301 -10 2002 111 3 29 chr17 10908343 10908649 -78595904 - AluSx SINE Alu -14 298 1 445 190 49 33 chr17 10908656 10908803 -78595750 - MER106B DNA MER1_type -82 977 3 1136 214 120 79 chr17 10908829 10908957 -78595596 - MLT1A1 LTR MaLR -2 363 242 2093 104 7 3 chr17 10908957 10909255 -78595298 + AluSq SINE Alu 1 299 -14 1136 214 120 79 chr17 10909255 10909468 -78595085 - MLT1A1 LTR MaLR -123 242 8 1031 242 133 32 chr17 10909632 10909971 -78594582 - MLT1E LTR MaLR 0 593 221 248 257 0 27 chr17 10909979 10910053 -78594500 + GA-rich Low_complexity Low_complexity 1 72 0 306 215 194 32 chr17 10910080 10910173 -78594380 - MLT1F LTR MaLR -466 76 3 2226 89 0 16 chr17 10910450 10910764 -78593789 - AluY SINE Alu 0 311 3 568 281 111 38 chr17 10910922 10911157 -78593396 + MIR SINE MIR 8 259 -3 572 339 27 14 chr17 10911331 10911552 -78593001 - MIR SINE MIR -11 251 28 458 220 135 64 chr17 10912067 10912118 -78592435 - LTR67 LTR ERVL -2 555 509 2231 112 0 0 chr17 10912118 10912421 -78592132 + AluSx SINE Alu 1 303 -9 458 220 135 64 chr17 10912421 10912510 -78592043 - LTR67 LTR ERVL -48 509 405 1563 177 50 0 chr17 10912571 10912854 -78591699 + AluJb SINE Alu 1 297 -15 307 202 79 11 chr17 10912855 10912944 -78591609 + L1MC5 LINE L1 7755 7849 -112 554 218 65 0 chr17 10912999 10913123 -78591430 + L1PB4 LINE L1 6022 6153 -3 3510 160 10 42 chr17 10913144 10913851 -78590702 - L1MB8 LINE L1 -6 6172 5489 25 0 0 0 chr17 10913855 10913880 -78590673 + AT_rich Low_complexity Low_complexity 1 25 0 1770 115 4 0 chr17 10913919 10914172 -78590381 - AluSx SINE Alu -17 295 42 4896 160 51 13 chr17 10914182 10915342 -78589211 - L1MB4 LINE L1 -38 6142 4930 2037 142 3 0 chr17 10915401 10915712 -78588841 + AluSx SINE Alu 1 312 0 415 249 54 95 chr17 10915831 10916052 -78588501 - MLT1J LTR MaLR -71 440 229 2473 55 6 10 chr17 10916145 10916457 -78588096 - AluY SINE Alu 0 311 1 502 246 47 47 chr17 10916663 10916857 -78587696 - Charlie8 DNA MER1_type -2233 184 1 774 247 114 0 chr17 10916868 10917095 -78587458 + L3 LINE CR1 1237 1489 -88 187 261 22 0 chr17 10917090 10917136 -78587417 + MIR3 SINE MIR 159 205 -3 * 774 234 35 0 chr17 10917493 10917664 -78586889 + MER45A DNA AcHobo 1 177 -1 1436 172 0 30 chr17 10917718 10917986 -78586567 - AluJb SINE Alu -37 275 16 1276 148 122 130 chr17 10918193 10918261 -78586292 - MLT1A2 LTR MaLR 0 374 307 2105 138 0 0 chr17 10918261 10918573 -78585980 - AluSx SINE Alu 0 312 1 1276 148 122 130 chr17 10918573 10918881 -78585672 - MLT1A2 LTR MaLR -67 307 1 1243 196 191 45 chr17 10919005 10919404 -78585149 + MSTB2 LTR MaLR 1 457 0 2206 112 0 0 chr17 10919547 10919852 -78584701 - AluSc SINE Alu -4 305 1 2186 106 0 25 chr17 10919892 10920229 -78584324 - AluSx SINE Alu 0 329 1 234 0 0 0 chr17 10920369 10920395 -78584158 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1126 280 122 48 chr17 10920882 10921407 -78583146 + MLT1K LTR MaLR 2 565 -23 2071 119 10 6 chr17 10921459 10921842 -78582711 + AluSq SINE Alu 1 384 0 593 306 93 14 chr17 10922533 10922749 -78581804 - MIR SINE MIR -27 235 3 257 211 0 67 chr17 10922783 10922873 -78581680 - L1ME4a LINE L1 -207 5914 5831 461 220 151 5 chr17 10922875 10923061 -78581492 - L1MC5 LINE L1 -35 7926 7714 540 205 153 95 chr17 10923328 10923477 -78581076 - MER3 DNA MER1_type 0 209 45 1872 155 0 13 chr17 10923477 10923793 -78580760 - AluJb SINE Alu 0 312 1 540 205 153 95 chr17 10923793 10923833 -78580720 - MER3 DNA MER1_type -164 45 9 1553 166 111 31 chr17 10925078 10925439 -78579114 - MLT1F LTR MaLR 0 542 169 530 237 26 46 chr17 10925840 10925992 -78578561 - MLT1F LTR MaLR -393 149 1 317 283 54 24 chr17 10926149 10926315 -78578238 - L1ME4a LINE L1 0 6121 5951 606 250 8 0 chr17 10926336 10926468 -78578085 - FLAM_A SINE Alu 0 133 1 193 222 0 0 chr17 10926469 10926505 -78578048 - L2 LINE L2 -10 3303 3268 21 71 0 0 chr17 10926666 10926708 -78577845 + AT_rich Low_complexity Low_complexity 1 42 0 2219 100 0 3 chr17 10926870 10927179 -78577374 - AluSx SINE Alu -4 308 1 1429 189 70 0 chr17 10927203 10927317 -78577236 + AluJb SINE Alu 2 107 -205 399 41 0 0 chr17 10927317 10927366 -78577187 + (CA)n Simple_repeat Simple_repeat 2 50 0 1429 189 70 0 chr17 10927366 10927521 -78577032 + AluJb SINE Alu 107 290 -22 26 50 0 0 chr17 10927545 10927585 -78576968 + AT_rich Low_complexity Low_complexity 1 40 0 1770 140 3 2 chr17 10927722 10927761 -78576792 - L1P4 LINE L1 -464 5702 5665 2022 116 10 3 chr17 10927761 10928062 -78576491 - AluSx SINE Alu -9 303 1 1770 140 3 2 chr17 10928062 10928329 -78576224 - L1P4 LINE L1 -501 5665 5394 569 300 43 36 chr17 10928325 10928453 -78576100 - L1ME4a LINE L1 -219 5951 5825 * 2118 89 3 33 chr17 10928453 10928757 -78575796 - AluSg SINE Alu -15 295 1 569 300 43 36 chr17 10928757 10928929 -78575624 - L1ME4a LINE L1 -345 5825 5649 507 256 1 9 chr17 10928929 10929057 -78575496 - MER5B DNA MER1_type 0 178 51 889 147 0 0 chr17 10929078 10929207 -78575346 - FLAM_C SINE Alu -4 129 1 2337 104 3 0 chr17 10929235 10929542 -78575011 + AluSp SINE Alu 1 308 -5 6594 42 0 89 chr17 10929548 10930473 -78574080 + L1PA7 LINE L1 5312 6154 0 2050 102 11 18 chr17 10930497 10930781 -78573772 + AluSx SINE Alu 1 282 -30 452 283 170 22 chr17 10930831 10931012 -78573541 - L1ME4a LINE L1 -490 5672 5464 197 298 250 0 chr17 10932216 10932320 -78572233 + MIR SINE MIR 132 261 -1 23 33 0 0 chr17 10932321 10932351 -78572202 + AT_rich Low_complexity Low_complexity 1 30 0 577 245 0 14 chr17 10932393 10932532 -78572021 + L2 LINE L2 3176 3312 -1 818 263 84 20 chr17 10932606 10932997 -78571556 + L1ME4a LINE L1 5704 6119 -2 887 199 48 15 chr17 10933151 10933357 -78571196 - LTR67 LTR ERVL 0 557 345 622 275 17 0 chr17 10933425 10933603 -78570950 + MER5A DNA MER1_type 9 189 0 2099 144 0 16 chr17 10933671 10934016 -78570537 + AluSx SINE Alu 2 312 0 258 253 16 134 chr17 10934041 10934227 -78570326 - LTR67 LTR ERVL -387 170 7 475 310 6 44 chr17 10934292 10934379 -78570174 + L1ME4a LINE L1 4976 5065 -1081 2305 96 0 32 chr17 10934379 10934691 -78569862 - AluSq SINE Alu -11 302 1 475 310 6 44 chr17 10934691 10934964 -78569589 + L1ME4a LINE L1 5065 5322 -824 593 174 65 76 chr17 10934976 10935027 -78569526 - MLT1F1 LTR MaLR 0 567 517 1783 176 6 29 chr17 10935027 10935340 -78569213 - AluJo SINE Alu -6 306 1 593 174 65 76 chr17 10935340 10935472 -78569081 - MLT1F1 LTR MaLR -50 517 386 521 205 113 51 chr17 10935580 10935775 -78568778 + L1ME4a LINE L1 5522 5728 -393 2555 77 0 0 chr17 10935885 10936195 -78568358 + AluY SINE Alu 1 310 -1 238 224 45 83 chr17 10936209 10936318 -78568235 + L1ME4a LINE L1 5961 6064 -57 2484 87 0 3 chr17 10936318 10936627 -78567926 - AluSx SINE Alu -4 308 1 238 224 45 83 chr17 10936627 10936673 -78567880 + L1ME4a LINE L1 6064 6110 -11 402 327 53 19 chr17 10936846 10937109 -78567444 + L3 LINE CR1 1128 1399 -178 256 244 39 13 chr17 10937132 10937210 -78567343 - LTR67 LTR ERVL -2 555 476 2194 103 0 3 chr17 10937468 10937758 -78566795 - AluSg SINE Alu -21 289 1 205 256 0 0 chr17 10938658 10938701 -78565852 - L2 LINE L2 -22 3291 3249 726 245 67 114 chr17 10938705 10939170 -78565383 - LTR67 LTR ERVL -7 550 108 287 308 70 2 chr17 10939271 10939419 -78565134 - MIR SINE MIR -61 147 21 203 179 89 0 chr17 10939451 10939507 -78565046 - MIR SINE MIR -83 179 119 2473 111 5 45 chr17 10939668 10939883 -78564670 - THE1B LTR MaLR 0 364 169 2158 82 54 7 chr17 10939883 10940163 -78564390 + AluY SINE Alu 1 293 -18 2473 111 5 45 chr17 10940163 10940326 -78564227 - THE1B LTR MaLR -195 169 1 268 326 20 34 chr17 10941099 10941246 -78563307 + L2 LINE L2 2937 3081 -191 1656 185 24 0 chr17 10941624 10941911 -78562642 - AluJb SINE Alu -18 294 1 185 224 121 0 chr17 10941912 10941970 -78562583 - MIR SINE MIR -83 179 115 2574 77 0 0 chr17 10942211 10942522 -78562031 + AluY SINE Alu 1 311 0 465 206 0 0 chr17 10942780 10942887 -78561666 + (TGGA)n Simple_repeat Simple_repeat 4 110 0 2356 106 0 0 chr17 10943515 10943817 -78560736 - AluSx SINE Alu -10 302 1 552 242 88 33 chr17 10944240 10944502 -78560051 + MLT1L LTR MaLR 71 451 -164 1506 178 70 7 chr17 10944511 10944797 -78559756 + AluJo SINE Alu 1 304 -8 705 141 27 7 chr17 10944798 10944947 -78559606 + GA-rich Low_complexity Low_complexity 4 155 0 2318 110 3 0 chr17 10944955 10945264 -78559289 + AluSp SINE Alu 1 310 -3 261 237 40 13 chr17 10945314 10945390 -78559163 + MLT1L LTR MaLR 537 614 -1 2000 156 0 3 chr17 10945532 10945834 -78558719 - AluJb SINE Alu -11 301 1 1711 189 0 25 chr17 10945880 10946197 -78558356 - AluJo SINE Alu -3 309 1 552 214 8 8 chr17 10946303 10946429 -78558124 + L2 LINE L2 3188 3313 0 557 218 16 0 chr17 10947145 10947269 -78557284 - MIR SINE MIR -11 251 126 296 182 0 61 chr17 10947276 10947342 -78557211 - L2 LINE L2 -7 3306 3245 2118 110 7 26 chr17 10947363 10947671 -78556882 - AluSx SINE Alu -10 302 1 317 278 211 0 chr17 10948752 10948932 -78555621 + MIR SINE MIR 31 248 -14 1592 134 50 64 chr17 10949909 10950102 -78554451 - AluJb SINE Alu -5 307 118 2757 33 0 0 chr17 10950102 10950409 -78554144 + AluY SINE Alu 1 307 -4 1592 134 50 64 chr17 10950409 10950498 -78554055 - AluJb SINE Alu -194 118 29 222 174 0 0 chr17 10950587 10950633 -78553920 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 216 174 43 0 chr17 10950753 10950799 -78553754 + A-rich Low_complexity Low_complexity 2 49 0 294 84 37 19 chr17 10951345 10951407 -78553146 + L1MB2 LINE L1 6012 6074 -106 382 278 6 81 chr17 10951817 10951990 -78552563 - HAL1b LINE L1 -436 912 753 573 88 36 146 chr17 10952014 10952063 -78552490 - L1MB3 LINE L1 -11 6172 6119 2168 131 3 0 chr17 10952063 10952368 -78552185 - AluSx SINE Alu -6 306 1 573 88 36 146 chr17 10952368 10952455 -78552098 - L1MB3 LINE L1 -64 6119 6051 371 202 24 4 chr17 10952462 10952546 -78552007 + AluJo SINE Alu 1 56 -252 852 181 0 0 chr17 10952546 10952673 -78551880 - AluJb SINE Alu -55 257 131 1520 148 12 0 chr17 10952674 10952917 -78551636 + AluJo SINE Alu 66 311 -1 4086 170 27 29 chr17 10952924 10954067 -78550486 - L1MB3 LINE L1 -172 6011 4865 1798 154 73 20 chr17 10954067 10954423 -78550130 - THE1C LTR MaLR 0 375 1 4086 170 27 29 chr17 10954423 10954642 -78549911 - L1MB3 LINE L1 -1318 4865 4647 1844 186 112 23 chr17 10954758 10955187 -78549366 - MLT1C LTR MaLR 0 467 1 580 263 116 17 chr17 10955438 10955670 -78548883 + MIR SINE MIR 5 259 -3 1865 156 20 3 chr17 10955798 10956100 -78548453 - AluSq SINE Alu -6 307 1 286 227 0 13 chr17 10956105 10956180 -78548373 - L1MB3 LINE L1 -1460 4686 4613 291 182 0 0 chr17 10956180 10956257 -78548296 + GA-rich Low_complexity Low_complexity 2 78 0 374 221 115 25 chr17 10956284 10956406 -78548147 - L1MB3 LINE L1 -1526 4620 4488 921 174 79 0 chr17 10956668 10956846 -78547707 + LTR47A LTR ERVL 261 452 0 246 279 12 47 chr17 10956857 10957029 -78547524 - L1MB3 LINE L1 -1674 4472 4307 1683 171 0 45 chr17 10957045 10957354 -78547199 + AluJb SINE Alu 1 295 -17 1346 199 4 4 chr17 10957371 10957637 -78546916 - L1MD3 LINE L1 -1 7994 7729 1950 240 66 31 chr17 10957677 10958376 -78546177 - L1MB3 LINE L1 -1870 4276 3554 2450 87 3 0 chr17 10958417 10958726 -78545827 + AluSp SINE Alu 1 310 -3 1458 162 46 18 chr17 10959492 10959819 -78544734 - Charlie1 DNA MER1_type -6 2755 2420 1811 83 21 0 chr17 10959827 10960068 -78544485 - L1P4 LINE L1 -347 5819 5574 908 133 8 0 chr17 10960069 10960197 -78544356 - AluSq/x SINE Alu -184 129 1 5523 185 6 42 chr17 10960197 10961153 -78543400 - L1 LINE L1 -1890 4256 3350 1405 102 15 5 chr17 10961153 10961359 -78543194 - L1PB2 LINE L1 -1 6150 5943 5523 185 6 42 chr17 10961359 10961607 -78542946 - L1 LINE L1 -2796 3350 3095 201 278 69 0 chr17 10961614 10961686 -78542867 - L3 LINE CR1 -191 1386 1310 1043 176 11 0 chr17 10961695 10961882 -78542671 + MER5A DNA MER1_type 1 189 0 202 103 0 0 chr17 10961893 10961922 -78542631 - MER5C DNA MER1_type -4 320 292 2354 102 3 3 chr17 10962062 10962375 -78542178 + AluSq SINE Alu 1 313 0 331 272 39 10 chr17 10962381 10962484 -78542069 - MER5C DNA MER1_type -214 110 5 373 198 35 0 chr17 10962554 10962647 -78541906 - MER5A DNA MER1_type -89 100 4 378 274 33 26 chr17 10962656 10962809 -78541744 - L3 LINE CR1 -266 1311 1158 615 266 55 10 chr17 10963807 10964006 -78540547 + MIR SINE MIR 49 256 -6 2163 120 16 45 chr17 10964395 10964770 -78539783 + THE1B LTR MaLR 1 364 0 1031 249 99 78 chr17 10965499 10965924 -78538629 + MLT1K LTR MaLR 94 527 -61 2255 99 0 0 chr17 10966185 10966487 -78538066 - AluSx SINE Alu 0 302 1 2018 188 53 2 chr17 10966548 10966963 -78537590 + MER63B DNA MER1_type 1 436 0 909 226 157 63 chr17 10967260 10967302 -78537251 - LTR33 LTR ERVL 0 521 484 2173 116 162 8 chr17 10967302 10967673 -78536880 - MSTA LTR MaLR 0 428 1 909 226 157 63 chr17 10967673 10968090 -78536463 - LTR33 LTR ERVL -37 484 19 212 304 109 22 chr17 10968446 10968584 -78535969 + MIR3 SINE MIR 13 162 -46 183 80 0 0 chr17 10968802 10968827 -78535726 + (CAA)n Simple_repeat Simple_repeat 2 26 0 502 255 26 63 chr17 10969796 10970022 -78534531 - MIR SINE MIR -20 242 26 717 144 4 43 chr17 10970325 10970600 -78533953 + (ATGGTG)n Simple_repeat Simple_repeat 1 264 0 770 168 6 0 chr17 10970618 10970779 -78533774 + (ATG)n Simple_repeat Simple_repeat 3 164 0 746 195 43 16 chr17 10971039 10971224 -78533329 - L1MB8 LINE L1 -1 6177 5988 405 284 35 35 chr17 10971242 10971383 -78533170 - MIR SINE MIR -108 154 14 273 313 26 52 chr17 10971392 10971507 -78533046 - MIR SINE MIR -67 141 30 200 319 88 18 chr17 10971965 10972078 -78532475 + MIR SINE MIR 29 149 -59 186 133 0 0 chr17 10972156 10972186 -78532367 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 1912 180 29 35 chr17 10972197 10972703 -78531850 - L1MA9 LINE L1 -12 6172 5667 225 159 0 0 chr17 10972728 10972772 -78531781 - LTR66 LTR ERVL -169 441 398 1739 123 60 97 chr17 10972772 10972889 -78531664 - L1M2 LINE L1 -535 5777 5657 2969 13 0 0 chr17 10972889 10973207 -78531346 + AluYb8 SINE Alu 1 318 0 1739 123 60 97 chr17 10973207 10973438 -78531115 - L1M2 LINE L1 -655 5657 5442 311 161 0 16 chr17 10975260 10975322 -78529231 - MER103 DNA DNA -87 79 19 215 330 21 0 chr17 10975493 10975590 -78528963 + (GGGTG)n Simple_repeat Simple_repeat 2 100 0 5277 64 18 0 chr17 10976369 10977045 -78527508 + L1PA7 LINE L1 5463 6150 -4 224 222 37 0 chr17 10978337 10978391 -78526162 + CT-rich Low_complexity Low_complexity 3 58 0 441 0 0 0 chr17 10978992 10979041 -78525512 + (TG)n Simple_repeat Simple_repeat 2 50 0 241 301 68 8 chr17 10979515 10979648 -78524905 - MER117 DNA MER1_type -56 141 1 390 298 68 58 chr17 10980260 10980814 -78523739 + L1ME4a LINE L1 5287 5849 -272 2235 93 7 17 chr17 10980814 10981115 -78523438 + AluSx SINE Alu 1 298 -14 390 298 68 58 chr17 10981115 10981165 -78523388 + L1ME4a LINE L1 5849 5897 -224 24 32 0 0 chr17 10981183 10981214 -78523339 + AT_rich Low_complexity Low_complexity 1 31 0 538 162 152 0 chr17 10981215 10981320 -78523233 - FLAM_C SINE Alu -2 141 21 23 0 0 0 chr17 10981320 10981343 -78523210 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr17 10981445 10981476 -78523077 + AT_rich Low_complexity Low_complexity 1 31 0 832 187 19 0 chr17 10981485 10981640 -78522913 - FRAM SINE Alu -2 174 17 25 0 0 0 chr17 10982693 10982718 -78521835 + AT_rich Low_complexity Low_complexity 1 25 0 820 124 31 16 chr17 10982718 10982847 -78521706 - FLAM_C SINE Alu 0 133 3 2256 112 3 7 chr17 10982859 10983164 -78521389 - AluSx SINE Alu -8 304 1 255 268 71 62 chr17 10983166 10983278 -78521275 - MIR SINE MIR -98 164 52 413 350 7 0 chr17 10984280 10984417 -78520136 - MIR3 SINE MIR -4 204 67 1497 248 76 11 chr17 10986202 10986674 -78517879 + MER113 DNA MER1_type? 6 508 -13 2272 102 17 0 chr17 10986909 10987202 -78517351 + AluSp SINE Alu 1 298 -15 291 250 140 30 chr17 10987546 10987646 -78516907 - L2 LINE L2 -23 3249 3139 2083 120 7 13 chr17 10988065 10988365 -78516188 - AluSg1 SINE Alu -11 298 1 2431 88 0 0 chr17 10988950 10989244 -78515309 + AluSq SINE Alu 1 294 -19 303 180 49 0 chr17 10990453 10990514 -78514039 + MER69 DNA AcHobo 1 64 -1162 255 143 155 24 chr17 10990645 10990729 -78513824 + MER69 DNA AcHobo 2389 2483 -43 2204 91 0 0 chr17 10990731 10991006 -78513547 + AluSq SINE Alu 1 275 -38 1971 190 52 0 chr17 10991051 10991398 -78513155 + MLT1A1 LTR MaLR 1 365 0 1976 103 0 0 chr17 10992046 10992298 -78512255 + AluSx SINE Alu 49 300 -12 262 203 0 17 chr17 10992322 10992381 -78512172 + L1ME LINE L1 5725 5782 -380 407 299 30 48 chr17 10994062 10994229 -78510324 - MIR SINE MIR -89 173 10 2344 98 0 22 chr17 10994883 10995198 -78509355 + AluSc SINE Alu 2 309 0 183 184 0 82 chr17 10995232 10995281 -78509272 - L2 LINE L2 -190 3082 3038 2630 59 0 0 chr17 10995399 10995704 -78508849 - AluY SINE Alu -6 305 1 473 352 26 11 chr17 10995778 10996042 -78508511 - L1ME LINE L1 -352 5818 5551 2301 82 10 26 chr17 10996260 10996605 -78507948 + AluSx SINE Alu 14 353 0 230 287 0 35 chr17 10997146 10997224 -78507329 + (CA)n Simple_repeat Simple_repeat 1 77 -7 2047 122 3 7 chr17 10997224 10997518 -78507035 - AluSx SINE Alu -19 293 1 230 287 0 35 chr17 10997518 10997526 -78507027 + (CA)n Simple_repeat Simple_repeat 77 84 0 216 0 0 0 chr17 10997528 10997552 -78507001 + (T)n Simple_repeat Simple_repeat 1 24 0 1534 213 7 3 chr17 10997593 10997894 -78506659 - AluJo SINE Alu -10 302 1 23 0 0 0 chr17 10998093 10998116 -78506437 + AT_rich Low_complexity Low_complexity 1 23 0 840 183 0 0 chr17 10998119 10998250 -78506303 - FLAM_C SINE Alu -2 131 1 2413 61 0 0 chr17 10998439 10998746 -78505807 - AluSc SINE Alu 0 307 1 779 301 65 0 chr17 10998826 10999055 -78505498 - MIR SINE MIR -10 252 9 2339 102 0 25 chr17 10999233 10999548 -78505005 - AluSc SINE Alu -2 307 1 1739 153 0 67 chr17 10999593 10999761 -78504792 - AluJb SINE Alu -19 293 154 2898 13 0 0 chr17 10999761 11000072 -78504481 - AluYa5 SINE Alu 0 311 1 1739 153 0 67 chr17 11000072 11000217 -78504336 - AluJb SINE Alu -158 154 1 28 48 0 0 chr17 11000283 11000325 -78504228 + AT_rich Low_complexity Low_complexity 1 42 0 336 374 43 0 chr17 11001137 11001324 -78503229 + L2 LINE L2 1851 2045 -1269 2422 108 0 6 chr17 11001435 11001749 -78502804 - AluSx SINE Alu 0 312 1 2168 99 55 0 chr17 11002472 11002589 -78501964 + AluSx SINE Alu 1 110 -202 184 29 29 29 chr17 11002589 11002623 -78501930 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2168 99 55 0 chr17 11002623 11002797 -78501756 + AluSx SINE Alu 110 308 -4 311 282 162 0 chr17 11002936 11003053 -78501500 + L2 LINE L2 3136 3271 -1 2215 112 3 0 chr17 11003507 11003835 -78500718 + AluSx SINE Alu 1 329 0 337 287 107 56 chr17 11004127 11004343 -78500210 + MIR SINE MIR 31 257 -5 806 193 30 6 chr17 11004344 11004510 -78500043 - FRAM SINE Alu -7 169 1 651 200 33 44 chr17 11005440 11005620 -78498933 + MER20 DNA MER1_type 42 219 0 2206 117 0 3 chr17 11006396 11006696 -78497857 + AluSq SINE Alu 1 299 -14 288 247 116 7 chr17 11007120 11007266 -78497287 + MER3 DNA MER1_type 48 209 0 2217 96 4 0 chr17 11007369 11007686 -78496867 + AluSx SINE Alu 1 318 0 235 325 0 12 chr17 11007686 11007769 -78496784 - MIR3 SINE MIR -7 201 120 560 224 105 28 chr17 11007770 11007862 -78496691 + MIR SINE MIR 51 159 -103 1780 140 101 3 chr17 11007862 11008190 -78496363 + MER46B DNA MER2_type 2 236 0 560 224 105 28 chr17 11008190 11008240 -78496313 + MIR SINE MIR 159 204 -58 2204 123 0 7 chr17 11008242 11008551 -78496002 + AluSx SINE Alu 1 307 -5 278 300 40 0 chr17 11008747 11008847 -78495706 + MER91A DNA MER1_type 93 196 0 198 172 259 0 chr17 11008847 11008905 -78495648 - MIR SINE MIR -77 131 59 2143 212 21 60 chr17 11009200 11009693 -78494860 + MER74A LTR ERVL 2 470 -88 2134 108 24 0 chr17 11009693 11009980 -78494573 - AluSx SINE Alu -16 296 3 2143 212 21 60 chr17 11009980 11010066 -78494487 + MER74A LTR ERVL 470 558 0 198 327 129 10 chr17 11010299 11010400 -78494153 + MIR3 SINE MIR 60 172 -36 2379 92 0 0 chr17 11010544 11010838 -78493715 + AluSc SINE Alu 1 294 -15 180 0 0 0 chr17 11011246 11011266 -78493287 + (TAA)n Simple_repeat Simple_repeat 3 22 0 468 269 0 0 chr17 11011266 11011370 -78493183 - MIR SINE MIR -2 260 157 2687 48 0 3 chr17 11011461 11011772 -78492781 - AluY SINE Alu -1 310 1 273 351 13 0 chr17 11011772 11011849 -78492704 - MIR SINE MIR -114 148 71 307 276 61 10 chr17 11012161 11012259 -78492294 + MIR SINE MIR 110 212 -50 669 142 39 113 chr17 11012444 11012617 -78491936 - MER53 DNA DNA 0 189 32 805 159 0 0 chr17 11012617 11012762 -78491791 - L1MA4 LINE L1 -6 6294 6150 669 142 39 113 chr17 11012762 11012792 -78491761 - MER53 DNA DNA -157 32 1 1964 129 57 0 chr17 11013292 11013572 -78490981 - AluSg SINE Alu -14 296 1 2180 128 0 28 chr17 11013802 11014122 -78490431 - AluSx SINE Alu 0 312 2 31 26 0 0 chr17 11014682 11014720 -78489833 + AT_rich Low_complexity Low_complexity 1 38 0 1459 202 69 0 chr17 11014821 11014983 -78489570 - AluJb SINE Alu -16 296 106 255 61 0 0 chr17 11014983 11015016 -78489537 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1459 202 69 0 chr17 11015016 11015130 -78489423 - AluJb SINE Alu -206 106 1 2350 179 70 56 chr17 11015133 11015580 -78488973 + L1MB7 LINE L1 5557 5996 -188 2372 96 0 3 chr17 11015580 11015883 -78488670 + AluSc SINE Alu 1 302 -7 2350 179 70 56 chr17 11015883 11015976 -78488577 + L1MB7 LINE L1 5996 6109 -75 2031 139 7 7 chr17 11015976 11016271 -78488282 - AluSx SINE Alu -17 295 1 2350 179 70 56 chr17 11016271 11016339 -78488214 + L1MB7 LINE L1 6109 6175 -9 295 259 148 9 chr17 11016988 11017096 -78487457 + L2 LINE L2 3191 3313 0 230 234 258 8 chr17 11017169 11017297 -78487256 - MARNA DNA Mariner -17 569 410 2304 101 0 16 chr17 11017307 11017614 -78486939 + AluSg SINE Alu 1 302 -8 2589 78 0 0 chr17 11018484 11018793 -78485760 + AluSc SINE Alu 1 309 0 2175 118 17 0 chr17 11019859 11020147 -78484406 + AluSq SINE Alu 1 293 -20 2273 93 23 0 chr17 11020481 11020782 -78483771 - AluY SINE Alu -3 308 1 394 269 200 14 chr17 11021099 11021244 -78483309 + MIR SINE MIR 11 182 -80 571 86 0 21 chr17 11021757 11021850 -78482703 + (TTCCC)n Simple_repeat Simple_repeat 3 93 0 1958 157 20 0 chr17 11021866 11022171 -78482382 - AluSq SINE Alu -2 311 1 469 177 20 11 chr17 11022331 11022499 -78482054 + MLT1E1 LTR MaLR 1 231 -423 2236 116 0 3 chr17 11023711 11024012 -78480541 + AluSg SINE Alu 1 300 -10 218 284 90 0 chr17 11024204 11024271 -78480282 - MIR3 SINE MIR -10 198 126 200 320 137 23 chr17 11024281 11024456 -78480097 - MIR SINE MIR -14 248 54 286 230 0 4 chr17 11024961 11025065 -78479488 + MLT1E1 LTR MaLR 79 229 -425 2360 91 7 7 chr17 11025081 11025390 -78479163 + AluSg SINE Alu 1 309 -1 403 238 14 61 chr17 11025597 11025749 -78478804 + MER57A LTR ERV1 42 190 -244 817 222 103 35 chr17 11025754 11026073 -78478480 + MER57A LTR ERV1 123 403 0 2184 126 0 25 chr17 11026354 11026672 -78477881 + AluSx SINE Alu 1 310 -2 446 88 15 0 chr17 11026672 11026740 -78477813 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 540 238 116 11 chr17 11026744 11026925 -78477628 + MIR SINE MIR 63 262 0 351 0 0 0 chr17 11028600 11028639 -78475914 + (T)n Simple_repeat Simple_repeat 1 39 0 2254 108 0 3 chr17 11029734 11030031 -78474522 - AluSx SINE Alu -14 298 3 886 232 11 21 chr17 11031185 11031250 -78473303 + MER5A DNA MER1_type 2 66 -123 1598 174 30 27 chr17 11031250 11031549 -78473004 + AluJo SINE Alu 2 301 -11 886 232 11 21 chr17 11031549 11031673 -78472880 + MER5A DNA MER1_type 66 189 0 223 256 26 39 chr17 11031690 11031768 -78472785 - MIR SINE MIR -91 117 41 3517 228 36 19 chr17 11031794 11032592 -78471961 + MER21B LTR ERV1 1 812 -51 799 255 109 40 chr17 11033220 11033418 -78471135 - MER113 DNA MER1_type? -169 352 120 2656 168 19 28 chr17 11033418 11033883 -78470670 + MLT1C LTR MaLR 5 465 -2 799 255 109 40 chr17 11033883 11034013 -78470540 - MER113 DNA MER1_type? -401 120 1 2293 96 0 7 chr17 11034064 11034365 -78470188 - AluSq SINE Alu -14 299 1 1180 36 0 0 chr17 11035971 11036108 -78468445 + AluY SINE Alu 166 302 -9 2027 94 11 7 chr17 11037643 11037938 -78466615 - AluSq SINE Alu 0 304 9 1070 158 33 0 chr17 11038156 11038339 -78466214 - MER5A DNA MER1_type 0 189 1 326 276 217 7 chr17 11038354 11038506 -78466047 + MER5A DNA MER1_type 6 189 0 456 62 0 0 chr17 11038612 11038676 -78465877 + (TG)n Simple_repeat Simple_repeat 2 65 0 239 309 21 0 chr17 11038955 11039049 -78465504 + CT-rich Low_complexity Low_complexity 4 99 0 201 133 0 0 chr17 11039091 11039121 -78465432 + (CA)n Simple_repeat Simple_repeat 1 30 0 2299 110 0 0 chr17 11039153 11039452 -78465101 - AluSx SINE Alu -13 299 1 5893 184 116 17 chr17 11039923 11040118 -78464435 - Charlie1a DNA MER1_type -1306 1455 1281 2258 116 0 0 chr17 11040118 11040420 -78464133 - AluSx SINE Alu -10 302 1 5893 184 116 17 chr17 11040420 11041547 -78463006 - Charlie1a DNA MER1_type -1480 1281 1 188 276 172 11 chr17 11041658 11041745 -78462808 + MER5A DNA MER1_type 89 189 0 273 156 219 94 chr17 11041889 11042049 -78462504 - MER104 DNA Tc2 0 180 1 277 268 0 14 chr17 11042151 11042222 -78462331 - MER5A DNA MER1_type -88 101 32 260 233 53 47 chr17 11042226 11042376 -78462177 - MER113 DNA MER1_type? -370 151 1 931 317 165 6 chr17 11042611 11043150 -78461403 - L3 LINE CR1 -182 1395 771 188 328 57 49 chr17 11044236 11044358 -78460195 - L2 LINE L2 -7 3265 3143 328 296 23 0 chr17 11045038 11045126 -78459427 + MIR3 SINE MIR 108 197 -11 203 313 76 30 chr17 11045525 11045656 -78458897 + L2 LINE L2 3116 3252 -20 869 211 0 0 chr17 11046431 11046592 -78457961 - AluSx SINE Alu -4 308 148 1190 129 0 6 chr17 11046609 11046772 -78457781 - AluSx SINE Alu -150 162 1 753 85 0 0 chr17 11047265 11047371 -78457182 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 2332 87 3 0 chr17 11047376 11047675 -78456878 - AluSp SINE Alu 0 313 14 505 287 0 18 chr17 11047747 11047914 -78456639 - MER103 DNA DNA -1 165 2 247 217 0 83 chr17 11048045 11048105 -78456448 + L2 LINE L2 3218 3272 0 2064 143 0 10 chr17 11048224 11048538 -78456015 + AluSx SINE Alu 1 311 -1 596 301 163 0 chr17 11048553 11048749 -78455804 - MIR SINE MIR -18 244 17 239 248 133 26 chr17 11048776 11048889 -78455664 - L2 LINE L2 -25 3247 3123 22 35 0 0 chr17 11049127 11049156 -78455397 + AT_rich Low_complexity Low_complexity 1 29 0 447 310 26 13 chr17 11049187 11049342 -78455211 - MIR SINE MIR -105 157 1 306 106 0 0 chr17 11049640 11049687 -78454866 + (CA)n Simple_repeat Simple_repeat 2 48 0 2238 117 0 3 chr17 11050116 11050415 -78454138 + AluSx SINE Alu 1 298 -14 2540 60 0 22 chr17 11050554 11050868 -78453685 + AluY SINE Alu 1 307 -4 769 129 129 0 chr17 11052128 11052268 -78452285 - L1MA10 LINE L1 0 6334 6177 379 305 67 0 chr17 11053316 11053421 -78451132 - MIR SINE MIR -67 141 30 673 281 47 10 chr17 11053872 11054064 -78450489 + MIR SINE MIR 6 204 -58 326 284 86 0 chr17 11054413 11054494 -78450059 + MER81 DNA DNA 4 91 -23 643 134 0 0 chr17 11054605 11054702 -78449851 - AluSc SINE Alu 0 309 213 255 263 200 0 chr17 11054867 11054947 -78449606 - L2 LINE L2 0 3313 3218 446 282 219 7 chr17 11055020 11055256 -78449297 - L2 LINE L2 -262 3051 2770 711 47 20 10 chr17 11055525 11055780 -78448773 + AluSp SINE Alu 2 306 -7 2518 59 3 0 chr17 11056254 11056557 -78447996 - AluSq SINE Alu -9 304 1 724 273 65 29 chr17 11057458 11057506 -78447047 - L1ME4a LINE L1 -126 5995 5950 1658 114 0 4 chr17 11057506 11057743 -78446810 - AluSc SINE Alu -1 308 73 2289 95 7 0 chr17 11057744 11058039 -78446514 - AluSc SINE Alu -12 297 1 724 273 65 29 chr17 11058039 11058372 -78446181 - L1ME4a LINE L1 -170 5951 5598 2044 116 36 13 chr17 11058927 11059229 -78445324 + AluSc SINE Alu 1 309 0 795 239 46 35 chr17 11059248 11059350 -78445203 + L1M4 LINE L1 4317 4416 -1730 2407 92 0 0 chr17 11059350 11059653 -78444900 + AluSg SINE Alu 1 303 -7 795 239 46 35 chr17 11059653 11059834 -78444719 + L1M4 LINE L1 4416 4603 -1543 2719 213 84 44 chr17 11059936 11061068 -78443485 - L1ME1 LINE L1 -5 6161 4991 1363 248 48 83 chr17 11061353 11061512 -78443041 + L2 LINE L2 2474 2637 -676 1971 132 0 32 chr17 11061512 11061823 -78442730 - AluJb SINE Alu -7 305 5 1363 248 48 83 chr17 11061823 11062305 -78442248 + L2 LINE L2 2637 3075 -238 2524 44 0 0 chr17 11062305 11062599 -78441954 + AluY SINE Alu 1 294 -17 1363 248 48 83 chr17 11062599 11062830 -78441723 + L2 LINE L2 3075 3313 0 1998 138 0 0 chr17 11064169 11064472 -78440081 + AluSx SINE Alu 1 303 0 460 329 111 9 chr17 11064904 11065120 -78439433 - MIR SINE MIR -19 243 6 426 239 52 58 chr17 11066443 11066598 -78437955 + MER20B DNA MER1_type 1 154 -629 261 0 0 0 chr17 11066763 11066792 -78437761 + (T)n Simple_repeat Simple_repeat 1 29 0 320 269 23 39 chr17 11066813 11066943 -78437610 - L1ME4a LINE L1 -47 6074 5947 246 273 15 15 chr17 11067392 11067458 -78437095 + MIR SINE MIR 40 105 -103 753 301 64 4 chr17 11067467 11067703 -78436850 - MIR SINE MIR -12 250 1 26 30 0 0 chr17 11068436 11068469 -78436084 + AT_rich Low_complexity Low_complexity 1 33 0 286 208 145 38 chr17 11068571 11068730 -78435823 - L1ME4a LINE L1 0 6121 5946 467 271 231 8 chr17 11068786 11069037 -78435516 - L1ME4a LINE L1 -281 5840 5534 2122 86 22 59 chr17 11069841 11070165 -78434388 - AluSx SINE Alu 0 312 1 666 298 28 32 chr17 11070890 11071138 -78433415 + MIR SINE MIR 13 259 -3 381 162 0 0 chr17 11071722 11071790 -78432763 + (TA)n Simple_repeat Simple_repeat 1 68 0 1582 138 17 4 chr17 11071790 11072021 -78432532 - MER46A DNA MER2_type 0 236 3 227 53 0 26 chr17 11072021 11072059 -78432494 + (TG)n Simple_repeat Simple_repeat 2 38 0 2433 47 0 24 chr17 11072693 11072991 -78431562 + AluY SINE Alu 1 291 -20 388 319 76 32 chr17 11074814 11074999 -78429554 + MIR3 SINE MIR 15 207 -1 719 227 72 105 chr17 11075247 11075608 -78428945 - L1MC4 LINE L1 -1 8041 7693 21 0 0 0 chr17 11076260 11076281 -78428272 + AT_rich Low_complexity Low_complexity 1 21 0 252 86 0 0 chr17 11077498 11077533 -78427020 + (CA)n Simple_repeat Simple_repeat 2 36 0 184 300 210 0 chr17 11080073 11080173 -78424380 + MIR3 SINE MIR 65 185 -23 2041 129 0 0 chr17 11080330 11080644 -78423909 + AluSg SINE Alu 1 314 0 2283 105 7 0 chr17 11080715 11081010 -78423543 - AluSg SINE Alu -13 297 1 743 302 53 20 chr17 11081290 11081591 -78422962 + MARNA DNA Mariner 185 495 -91 242 275 225 22 chr17 11081493 11081631 -78422922 - MARNA DNA Mariner -399 187 22 * 1934 149 4 0 chr17 11082793 11083100 -78421453 + AluJb SINE Alu 1 308 0 24 32 0 0 chr17 11083186 11083217 -78421336 + AT_rich Low_complexity Low_complexity 1 31 0 2244 97 0 7 chr17 11083866 11084165 -78420388 + AluSc SINE Alu 1 297 -12 243 351 117 7 chr17 11084592 11084746 -78419807 - MIR3 SINE MIR -23 185 15 356 313 108 5 chr17 11084784 11084979 -78419574 + MIR SINE MIR 48 262 0 189 281 247 48 chr17 11085849 11085995 -78418558 + MIR3 SINE MIR 21 195 -13 4302 149 8 4 chr17 11088699 11089431 -78415122 - L1MB3 LINE L1 -2 6181 5447 703 206 37 16 chr17 11089459 11089648 -78414905 - L1MC5 LINE L1 -44 7917 7725 430 326 0 35 chr17 11089648 11089789 -78414764 - MIR3 SINE MIR -6 202 67 299 239 11 43 chr17 11091153 11091245 -78413308 + MIR SINE MIR 59 147 -61 2255 110 0 0 chr17 11091829 11092129 -78412424 - AluSq SINE Alu -13 300 1 22 0 0 0 chr17 11094039 11094061 -78410492 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 11095450 11095481 -78409072 + AT_rich Low_complexity Low_complexity 1 31 0 392 112 21 5 chr17 11095491 11095572 -78408981 - L1ME1 LINE L1 0 6184 6096 340 226 8 25 chr17 11095579 11095701 -78408852 - L1MD2 LINE L1 -26 6140 6040 23 54 0 0 chr17 11095955 11095992 -78408561 + AT_rich Low_complexity Low_complexity 1 37 0 601 191 33 33 chr17 11096072 11096224 -78408329 - L1MC5 LINE L1 -40 7921 7770 409 318 22 19 chr17 11096715 11097030 -78407523 - L1M4 LINE L1 -1490 4656 4341 299 224 13 26 chr17 11097122 11097198 -78407355 + MLT1J LTR MaLR 127 201 -310 330 284 90 15 chr17 11097475 11097676 -78406877 - L1M4 LINE L1 -1823 4323 4108 2683 161 30 34 chr17 11097854 11098388 -78406165 + L1MB7 LINE L1 5630 6161 -23 460 318 75 29 chr17 11098394 11098941 -78405612 - L1M4 LINE L1 -2202 3944 3373 246 251 0 62 chr17 11099009 11099188 -78405365 + T-rich Low_complexity Low_complexity 4 171 0 628 243 68 0 chr17 11099551 11099773 -78404780 - L1ME3A LINE L1 -215 5955 5719 1132 247 15 10 chr17 11099897 11100216 -78404337 - L1ME1 LINE L1 -5 6161 5841 824 214 48 24 chr17 11100345 11100593 -78403960 - L1ME1 LINE L1 -306 5860 5607 357 305 107 10 chr17 11100735 11101224 -78403329 + L1MC/D LINE L1 4724 5324 -846 477 0 0 0 chr17 11101224 11101277 -78403276 + (CA)n Simple_repeat Simple_repeat 2 54 0 357 305 107 10 chr17 11101277 11101534 -78403019 + L1MC/D LINE L1 5324 5555 -615 227 350 0 8 chr17 11102338 11102355 -78402198 - L1P4 LINE L1 -285 5878 5862 2489 231 120 25 chr17 11102355 11103560 -78400993 - L1MC4 LINE L1 -454 5708 4506 1008 232 23 26 chr17 11103562 11103872 -78400681 - L1MC4 LINE L1 -2057 4089 3781 2198 157 12 0 chr17 11103911 11104248 -78400305 + MER7A DNA MER2_type 8 346 0 354 189 81 0 chr17 11104259 11104333 -78400220 - L1M4c LINE L1 -2377 4580 4501 * 3779 210 41 33 chr17 11104324 11105453 -78399100 - L1M4c LINE L1 -2959 3998 2888 676 191 0 28 chr17 11105501 11105642 -78398911 - FLAM_C SINE Alu -2 141 5 388 268 56 82 chr17 11105655 11105886 -78398667 - L1M4c LINE L1 -4315 2823 2599 5391 257 63 39 chr17 11105943 11106288 -78398265 - L1M4c LINE L1 -4463 2675 2340 423 0 0 0 chr17 11106288 11106335 -78398218 + (TG)n Simple_repeat Simple_repeat 2 48 0 5391 257 63 39 chr17 11106335 11107254 -78397299 - L1M4c LINE L1 -4798 2340 1444 1282 167 0 12 chr17 11107254 11107500 -78397053 - L1MA4A LINE L1 -1 6302 6060 5391 257 63 39 chr17 11107500 11108713 -78395840 - L1M4c LINE L1 -5694 1444 1 5400 204 95 56 chr17 11108726 11110071 -78394482 - L1MDa LINE L1 -4149 2391 790 2327 126 25 3 chr17 11110071 11110427 -78394126 + THE1B LTR MaLR 1 364 0 5400 204 95 56 chr17 11110427 11111086 -78393467 - L1MDa LINE L1 -5750 790 158 1881 119 54 110 chr17 11111086 11111588 -78392965 - THE1C LTR MaLR 0 428 1 779 172 28 7 chr17 11111588 11111733 -78392820 - L1MDa LINE L1 -6378 162 15 1175 228 69 27 chr17 11111865 11112199 -78392354 - L2 LINE L2 0 3313 2966 212 324 165 23 chr17 11112341 11112517 -78392036 + MIR SINE MIR 61 261 -1 267 239 28 42 chr17 11112575 11112646 -78391907 - MIR3 SINE MIR -35 173 104 976 166 55 22 chr17 11112725 11112906 -78391647 + MER5A DNA MER1_type 3 189 0 2534 51 0 6 chr17 11113443 11113754 -78390799 - AluY SINE Alu -2 309 1 204 327 37 19 chr17 11115235 11115342 -78389211 + L2 LINE L2 2584 2692 -622 358 292 87 102 chr17 11115508 11115840 -78388713 + L2 LINE L2 2941 3267 -5 2142 117 30 3 chr17 11116412 11116710 -78387843 + AluSq SINE Alu 3 308 -5 283 229 33 16 chr17 11117018 11117079 -78387474 + MER69 DNA AcHobo 4 65 -112 497 191 167 0 chr17 11117218 11117344 -78387209 + MER69 DNA AcHobo 2380 2526 0 2570 62 0 0 chr17 11118518 11118824 -78385729 + AluY SINE Alu 1 306 -5 22 35 0 0 chr17 11118932 11118961 -78385592 + AT_rich Low_complexity Low_complexity 1 29 0 333 255 124 0 chr17 11119169 11119314 -78385239 - L1ME4a LINE L1 -204 5917 5755 273 362 0 9 chr17 11120220 11120336 -78384217 - MIR3 SINE MIR -13 195 81 367 338 60 15 chr17 11122315 11122448 -78382105 - MIR3 SINE MIR 0 208 70 21 0 0 0 chr17 11126342 11126363 -78378190 + AT_rich Low_complexity Low_complexity 1 21 0 287 350 25 17 chr17 11126871 11126991 -78377562 + MIR3 SINE MIR 38 158 -50 417 272 24 8 chr17 11129916 11130041 -78374512 + MIR3 SINE MIR 81 207 -1 2478 137 29 12 chr17 11136786 11137201 -78367352 - L1PA16 LINE L1 -11 6155 5734 2852 7 0 0 chr17 11138536 11138845 -78365708 - AluYa5 SINE Alu -2 309 1 23 0 0 0 chr17 11140325 11140348 -78364205 + AT_rich Low_complexity Low_complexity 1 23 0 419 301 23 29 chr17 11141450 11141623 -78362930 - MIR3 SINE MIR -9 199 28 190 314 47 12 chr17 11141652 11141738 -78362815 - MIR SINE MIR -142 120 32 23 54 0 0 chr17 11144542 11144579 -78359974 + AT_rich Low_complexity Low_complexity 1 37 0 1389 270 92 28 chr17 11144825 11145210 -78359343 - L2 LINE L2 0 3313 2954 2402 128 35 29 chr17 11145210 11145665 -78358888 + L1MA8 LINE L1 5831 6288 -3 1389 270 92 28 chr17 11145665 11145975 -78358578 - L2 LINE L2 -359 2954 2583 570 231 104 6 chr17 11145977 11146159 -78358394 - MLT1G LTR MaLR 0 590 391 1467 294 71 62 chr17 11146193 11147097 -78357456 - L2 LINE L2 -1541 1773 862 1320 254 35 0 chr17 11147099 11147473 -78357080 - L1M4 LINE L1 -2333 3813 3427 211 267 27 27 chr17 11147484 11147559 -78356994 - L2 LINE L2 -2448 866 792 332 296 159 56 chr17 11147824 11148094 -78356459 - L2 LINE L2 -67 3246 2949 591 303 32 23 chr17 11148132 11148350 -78356203 - MIR SINE MIR -18 244 25 405 167 0 0 chr17 11148362 11148440 -78356113 + CT-rich Low_complexity Low_complexity 3 80 0 1896 149 7 3 chr17 11148442 11148730 -78355823 - AluSx SINE Alu -21 291 3 253 184 41 0 chr17 11148748 11148797 -78355756 + L3 LINE CR1 1527 1577 0 263 237 36 65 chr17 11150243 11150382 -78354171 + (ATAGG)n Simple_repeat Simple_repeat 4 138 0 266 265 16 65 chr17 11150587 11150772 -78353781 + (ATAAG)n Simple_repeat Simple_repeat 2 177 0 244 326 54 31 chr17 11151204 11151333 -78353220 - L2 LINE L2 0 3313 3182 2041 299 129 40 chr17 11151465 11152657 -78351896 - L2 LINE L2 -529 2785 1488 23 33 0 0 chr17 11152746 11152776 -78351777 + AT_rich Low_complexity Low_complexity 1 30 0 482 120 100 0 chr17 11152776 11152876 -78351677 - L1MA9 LINE L1 -22 7709 7600 8345 228 36 73 chr17 11152879 11153717 -78350836 - L1MA9 LINE L1 -231 7500 6633 2799 91 8 3 chr17 11153717 11154090 -78350463 - THE1C LTR MaLR 0 375 1 9749 110 31 57 chr17 11154090 11155712 -78348841 - THE1C-int LTR MaLR 0 1580 1 2608 106 19 3 chr17 11155712 11156081 -78348472 - THE1C LTR MaLR 0 375 1 8345 228 36 73 chr17 11156081 11156547 -78348006 - L1MA9 LINE L1 -1096 6635 6153 1550 119 91 163 chr17 11156547 11157008 -78347545 - THE1C LTR MaLR 0 428 1 8345 228 36 73 chr17 11157008 11157347 -78347206 - L1MA9 LINE L1 -1578 6153 5803 2151 136 87 8 chr17 11157347 11157738 -78346815 - MSTA LTR MaLR 0 428 7 5519 131 38 46 chr17 11157738 11158818 -78345735 - MER11C LTR ERVK 0 1071 1 8345 228 36 73 chr17 11158818 11161557 -78342996 - L1MA9 LINE L1 -1926 5805 3033 1232 178 160 53 chr17 11161559 11161985 -78342568 - AluSx SINE Alu 0 456 1 2415 243 42 15 chr17 11161985 11162969 -78341584 - L1M2 LINE L1 -4194 2655 1646 615 330 137 33 chr17 11162971 11163708 -78340845 - L2 LINE L2 -2185 1129 316 23 0 0 0 chr17 11165478 11165501 -78339052 + AT_rich Low_complexity Low_complexity 1 23 0 216 86 0 0 chr17 11165614 11165649 -78338904 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 242 297 168 40 chr17 11165953 11166054 -78338499 - MIR3 SINE MIR -6 202 89 1121 293 165 25 chr17 11166326 11166961 -78337592 + L2 LINE L2 2250 2973 -341 2518 50 0 0 chr17 11168251 11168548 -78336005 + AluY SINE Alu 1 297 -14 21 0 0 0 chr17 11168590 11168611 -78335942 + AT_rich Low_complexity Low_complexity 1 21 0 276 305 76 0 chr17 11169583 11169688 -78334865 + L2 LINE L2 3167 3279 -34 23 33 0 0 chr17 11172533 11172563 -78331990 + AT_rich Low_complexity Low_complexity 1 30 0 191 254 169 51 chr17 11172899 11173017 -78331536 + MIR SINE MIR 90 221 -41 328 235 140 29 chr17 11173130 11173266 -78331287 + L1MC4 LINE L1 6609 6759 -1283 21 36 0 0 chr17 11175470 11175498 -78329055 + AT_rich Low_complexity Low_complexity 1 28 0 2392 110 0 0 chr17 11179254 11179564 -78324989 - AluSx SINE Alu -2 310 1 2149 135 3 0 chr17 11179837 11180134 -78324419 - AluSx SINE Alu -14 298 1 2286 92 30 3 chr17 11180778 11181083 -78323470 - AluSq SINE Alu 0 313 1 362 321 28 0 chr17 11181586 11181695 -78322858 - L2 LINE L2 -2 3311 3200 414 335 71 33 chr17 11181721 11181903 -78322650 + MER5A DNA MER1_type 1 189 0 1821 69 118 0 chr17 11182658 11182920 -78321633 + L1PA13 LINE L1 5852 6144 -19 673 320 74 4 chr17 11183068 11183299 -78321254 - MIR SINE MIR -3 259 13 1288 178 109 0 chr17 11183423 11183726 -78320827 + L1MB7 LINE L1 5849 6184 0 331 221 0 18 chr17 11184383 11184455 -78320098 - MIR SINE MIR -119 89 20 182 355 0 0 chr17 11187076 11187138 -78317415 - L2 LINE L2 -5 3267 3206 239 341 182 18 chr17 11188482 11188652 -78315901 + MIR3 SINE MIR 2 199 -9 264 289 62 39 chr17 11189817 11189945 -78314608 + L2 LINE L2 3137 3267 -5 204 179 0 0 chr17 11190462 11190501 -78314052 + (TG)n Simple_repeat Simple_repeat 2 40 0 210 71 0 0 chr17 11191755 11191783 -78312770 + (T)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 11192160 11192190 -78312363 + AT_rich Low_complexity Low_complexity 1 30 0 370 274 158 20 chr17 11192390 11192536 -78312017 - MIR3 SINE MIR -41 167 2 240 163 0 0 chr17 11194354 11194397 -78310156 + (CATA)n Simple_repeat Simple_repeat 2 44 0 235 326 7 7 chr17 11194800 11194938 -78309615 - L1 LINE L1 -2417 3729 3592 604 315 106 58 chr17 11195011 11195681 -78308872 - L1 LINE L1 -2709 3437 2736 887 260 166 19 chr17 11198761 11199134 -78305419 - L2 LINE L2 -1 3312 2885 349 312 43 0 chr17 11199148 11199289 -78305264 + L2 LINE L2 3161 3307 -6 1407 94 0 16 chr17 11200805 11200997 -78303556 - AluSc SINE Alu -1 308 120 284 337 20 92 chr17 11201198 11201394 -78303159 + MIR SINE MIR 29 210 -52 186 333 0 0 chr17 11203151 11203214 -78301339 - L2 LINE L2 -219 3053 2991 958 215 0 31 chr17 11204840 11205035 -78299518 - MER5A DNA MER1_type 0 189 1 252 260 23 68 chr17 11205287 11205464 -78299089 - MER112 DNA MER1_type -61 199 31 621 238 19 31 chr17 11207119 11207279 -78297274 + MIR SINE MIR 59 216 -46 22 35 0 0 chr17 11207369 11207398 -78297155 + AT_rich Low_complexity Low_complexity 1 29 0 2211 117 0 0 chr17 11207406 11207697 -78296856 + AluSx SINE Alu 1 291 -21 990 40 8 0 chr17 11208969 11209094 -78295459 + L1PB1 LINE L1 6025 6150 -1 2225 59 0 15 chr17 11211162 11211432 -78293121 + AluY SINE Alu 32 297 -14 229 228 193 9 chr17 11211433 11211547 -78293006 + L1ME4a LINE L1 5987 6121 0 6672 113 19 29 chr17 11213556 11214638 -78289915 + MER11C LTR ERVK 1 1071 0 1980 128 3 3 chr17 11214763 11215071 -78289482 + AluSx SINE Alu 1 308 0 631 249 72 37 chr17 11215108 11215509 -78289044 + L1ME4a LINE L1 5691 6105 -16 22 0 0 0 chr17 11215960 11215982 -78288571 + AT_rich Low_complexity Low_complexity 1 22 0 625 103 48 40 chr17 11216125 11216251 -78288302 + L1MA7 LINE L1 6165 6291 0 204 163 0 0 chr17 11217761 11217804 -78286749 + (TG)n Simple_repeat Simple_repeat 2 44 0 1347 158 0 14 chr17 11218347 11218562 -78285991 - AluJb SINE Alu -23 289 78 303 28 0 0 chr17 11219028 11219064 -78285489 + (TA)n Simple_repeat Simple_repeat 2 37 0 407 332 71 42 chr17 11219235 11219473 -78285080 - L2 LINE L2 -5 3267 3023 2057 113 0 36 chr17 11219569 11219871 -78284682 + AluSx SINE Alu 1 291 -21 345 307 20 0 chr17 11220965 11221066 -78283487 + MIR SINE MIR 44 146 -62 2318 91 0 3 chr17 11224387 11224685 -78279868 - AluY SINE Alu -14 297 1 524 212 123 47 chr17 11225471 11225641 -78278912 + MIR SINE MIR 47 229 -33 1533 109 0 0 chr17 11226025 11226226 -78278327 + AluSq SINE Alu 1 201 -112 22 0 0 0 chr17 11226226 11226248 -78278305 + AT_rich Low_complexity Low_complexity 1 22 0 6641 18 1 0 chr17 11226248 11227047 -78277506 - L1PA4 LINE L1 -3 6152 5353 728 93 9 19 chr17 11227047 11227155 -78277398 + AluSc SINE Alu 189 295 -14 230 224 24 12 chr17 11227789 11227874 -78276679 + (TA)n Simple_repeat Simple_repeat 2 87 0 278 299 36 67 chr17 11229015 11229239 -78275314 - L2 LINE L2 -215 3057 2841 871 150 0 36 chr17 11229698 11229838 -78274715 + AluJo SINE Alu 5 139 -173 22 0 0 0 chr17 11231298 11231320 -78273233 + AT_rich Low_complexity Low_complexity 1 22 0 2031 125 7 10 chr17 11231330 11231618 -78272935 + AluSx SINE Alu 13 299 -13 241 122 0 0 chr17 11231663 11231704 -78272849 + MLT2B1 LTR ERVL 1 41 -479 271 152 0 0 chr17 11231736 11231782 -78272771 + MLT2C1 LTR ERVL 350 395 -2 339 164 15 0 chr17 11231784 11231851 -78272702 - Charlie4 DNA MER1_type -1786 175 108 245 254 60 15 chr17 11232155 11232221 -78272332 + MER5B DNA MER1_type 1 69 -109 775 196 137 12 chr17 11232221 11232389 -78272164 + MER5A DNA MER1_type 1 189 0 354 322 9 9 chr17 11232460 11232575 -78271978 + L2 LINE L2 3198 3312 -1 2060 110 31 0 chr17 11232849 11233141 -78271412 - AluSq SINE Alu -12 301 1 209 297 139 59 chr17 11233525 11233727 -78270826 + L2 LINE L2 3093 3310 -3 2389 87 0 0 chr17 11233786 11234085 -78270468 + AluSg SINE Alu 2 300 -10 223 271 24 59 chr17 11234137 11234222 -78270331 + MIR SINE MIR 31 112 -150 1580 253 56 3 chr17 11235112 11235488 -78269065 + MSTD LTR MaLR 1 396 0 230 109 0 22 chr17 11235546 11235592 -78268961 - LTR66 LTR ERVL -175 435 391 4538 118 69 12 chr17 11235637 11236386 -78268167 - Tigger3(Golem) DNA MER2_type -1 3028 2237 614 128 24 128 chr17 11236381 11236427 -78268126 - Tigger3(Golem) DNA MER2_type -490 112 63 * 2192 96 0 57 chr17 11236427 11236741 -78267812 - AluSg SINE Alu -14 296 1 614 128 24 128 chr17 11236741 11236819 -78267734 - Tigger3(Golem) DNA MER2_type -539 63 1 1949 87 0 0 chr17 11237884 11238125 -78266428 + AluSq SINE Alu 1 241 -72 2458 212 56 18 chr17 11238165 11238770 -78265783 - L1ME1 LINE L1 -285 5881 5225 1092 196 0 6 chr17 11238770 11238949 -78265604 + MER45A DNA AcHobo 1 178 0 2458 212 56 18 chr17 11238949 11239209 -78265344 - L1ME1 LINE L1 -941 5225 4976 391 292 60 11 chr17 11239231 11239498 -78265055 - L1ME1 LINE L1 -1535 4611 4332 312 294 77 41 chr17 11239857 11240027 -78264526 - MLT1L LTR MaLR -2 613 438 2559 185 47 4 chr17 11240035 11240543 -78264010 - L1MD3 LINE L1 0 7995 7466 892 204 75 35 chr17 11240589 11240844 -78263709 - L1MC5 LINE L1 -36 7925 7661 316 318 45 68 chr17 11240862 11241126 -78263427 - MLT1J LTR MaLR -154 357 100 1925 117 7 21 chr17 11241506 11241788 -78262765 + AluSx SINE Alu 1 278 -34 653 215 7 0 chr17 11241992 11242127 -78262426 - MER104 DNA Tc2 -44 136 1 797 266 66 11 chr17 11242183 11242454 -78262099 - L1ME3 LINE L1 0 6164 5879 229 185 25 62 chr17 11242466 11242547 -78262006 + L1MC/D LINE L1 5853 5930 -1878 473 216 123 112 chr17 11242628 11242897 -78261656 + L2 LINE L2 3042 3313 0 2380 231 56 31 chr17 11242962 11243312 -78261241 - L1ME2 LINE L1 -70 6235 5895 2274 97 0 3 chr17 11243312 11243612 -78260941 + AluSx SINE Alu 1 299 -13 2380 231 56 31 chr17 11243612 11244077 -78260476 - L1ME2 LINE L1 -410 5895 5315 597 94 0 0 chr17 11244083 11244168 -78260385 + (TA)n Simple_repeat Simple_repeat 2 86 0 317 276 92 0 chr17 11244374 11244472 -78260081 - MIR SINE MIR -138 124 18 1522 166 92 142 chr17 11244680 11245121 -78259432 + LTR49 LTR ERV1 5 408 -187 2443 40 7 3 chr17 11245121 11245417 -78259136 + AluY SINE Alu 1 297 -14 1522 166 92 142 chr17 11245417 11245597 -78258956 + LTR49 LTR ERV1 408 595 0 727 273 151 61 chr17 11246074 11246334 -78258219 - MLT1K LTR MaLR -108 480 174 954 156 44 0 chr17 11246334 11246514 -78258039 - MER53 DNA DNA 0 189 2 727 273 151 61 chr17 11246514 11246631 -78257922 - MLT1K LTR MaLR -414 174 69 1726 158 103 41 chr17 11247266 11247574 -78256979 - MLT2D LTR ERVL -2 518 82 1861 140 13 13 chr17 11247574 11247874 -78256679 + AluJo SINE Alu 1 300 -12 1726 158 103 41 chr17 11247874 11247962 -78256591 - MLT2D LTR ERVL -438 82 1 1648 198 0 22 chr17 11248270 11248589 -78255964 + AluJo SINE Alu 1 312 0 2482 82 0 0 chr17 11249661 11249967 -78254586 - AluY SINE Alu -5 306 1 202 295 82 0 chr17 11250008 11250069 -78254484 - L3 LINE CR1 -4 1573 1508 582 104 125 0 chr17 11250082 11250178 -78254375 - L1MC2 LINE L1 -187 6157 6050 350 284 10 0 chr17 11250375 11250477 -78254076 + MER46C DNA MER2_type 235 337 -1 860 208 46 83 chr17 11250485 11250725 -78253828 - MER46C DNA MER2_type -106 232 2 446 77 0 0 chr17 11250774 11250839 -78253714 + Alu SINE Alu 246 310 -2 2301 105 20 0 chr17 11250840 11251146 -78253407 + AluSx SINE Alu 1 312 0 2373 81 3 0 chr17 11251284 11251582 -78252971 + AluSp SINE Alu 5 303 -10 274 335 36 24 chr17 11251608 11251775 -78252778 - MLT1K LTR MaLR -17 571 403 376 274 30 15 chr17 11252564 11252699 -78251854 - L1ME3A LINE L1 -5 6165 6029 2482 79 0 3 chr17 11253259 11253564 -78250989 - AluSx SINE Alu -8 304 1 3768 150 8 22 chr17 11254304 11254348 -78250205 - L1MB1 LINE L1 -5 6163 6120 2189 113 0 42 chr17 11254348 11254659 -78249894 - AluSx SINE Alu -14 298 1 3768 150 8 22 chr17 11254659 11255235 -78249318 - L1MB1 LINE L1 -48 6120 5552 422 333 33 22 chr17 11256997 11257273 -78247280 + L1ME LINE L1 5518 5796 -325 208 306 139 0 chr17 11257338 11257410 -78247143 + L2 LINE L2 3203 3284 -29 2080 97 35 3 chr17 11258823 11259112 -78245441 - AluSq SINE Alu -15 298 1 352 120 67 13 chr17 11259143 11259218 -78245335 - L1MC2 LINE L1 -11 6333 6255 1439 155 73 0 chr17 11259232 11259477 -78245076 - AluJo SINE Alu -44 268 6 283 142 0 0 chr17 11259477 11259534 -78245019 - Alu SINE Alu -268 40 2 8236 167 92 66 chr17 11259534 11259970 -78244583 - L1MC3 LINE L1 -109 7676 7253 264 269 21 11 chr17 11259970 11260063 -78244490 - MLT1F1 LTR MaLR -434 133 40 8236 167 92 66 chr17 11260063 11260254 -78244299 - L1MC3 LINE L1 -532 7253 7068 2151 117 7 0 chr17 11260254 11260554 -78243999 - AluSx SINE Alu -10 302 1 8236 167 92 66 chr17 11260554 11261811 -78242742 - L1MC3 LINE L1 -717 7068 5648 2130 86 7 0 chr17 11261955 11262261 -78242292 - AluY SINE Alu 0 308 1 1986 154 0 10 chr17 11262883 11263188 -78241365 + AluJb SINE Alu 1 302 -10 2370 86 3 0 chr17 11263658 11263960 -78240593 - AluY SINE Alu -8 303 1 2255 88 0 3 chr17 11264116 11264423 -78240130 - AluSq SINE Alu 0 306 1 2154 123 3 3 chr17 11264838 11265140 -78239413 + AluSx SINE Alu 1 302 -10 532 178 225 0 chr17 11265368 11265497 -78239056 + MER5A DNA MER1_type 3 160 -29 857 159 144 55 chr17 11266192 11266393 -78238160 - MER20 DNA MER1_type 0 219 1 3365 204 24 32 chr17 11266639 11267296 -78237257 - MER82 DNA MER2_type -1 652 1 2213 107 0 3 chr17 11268060 11268351 -78236202 - AluSg SINE Alu -20 290 1 339 283 133 6 chr17 11268579 11268759 -78235794 - MIR SINE MIR -13 249 47 613 264 29 23 chr17 11268993 11269053 -78235500 - MER5B DNA MER1_type -3 175 117 1848 110 8 0 chr17 11269053 11269323 -78235230 + AluSx SINE Alu 37 308 0 613 264 29 23 chr17 11269323 11269435 -78235118 - MER5B DNA MER1_type -61 117 1 919 239 27 0 chr17 11269481 11269665 -78234888 + MER5A DNA MER1_type 1 189 0 368 212 61 0 chr17 11269671 11269770 -78234783 + L1MC4a LINE L1 5337 5441 -918 2343 89 3 3 chr17 11269770 11270074 -78234479 + AluSx SINE Alu 1 304 -8 1276 110 0 0 chr17 11270074 11270237 -78234316 + AluSg/x SINE Alu 132 294 -16 400 312 59 86 chr17 11270240 11270475 -78234078 + L1MC4a LINE L1 5431 5648 -2160 1784 176 0 3 chr17 11270475 11270765 -78233788 + AluSx SINE Alu 20 308 -4 400 312 59 86 chr17 11270765 11271004 -78233549 + L1MC4a LINE L1 5648 5892 -1916 213 261 112 45 chr17 11272364 11272498 -78232055 + L2 LINE L2 2804 2946 -326 745 274 163 26 chr17 11272724 11273074 -78231479 - L2 LINE L2 -10 3303 2906 2255 122 0 0 chr17 11274073 11274376 -78230177 + AluSq SINE Alu 1 303 -10 269 315 86 50 chr17 11275968 11276247 -78228306 - L2 LINE L2 -159 3113 2825 421 328 25 66 chr17 11276398 11276642 -78227911 + MIR SINE MIR 20 253 -9 737 130 0 0 chr17 11277193 11277293 -78227260 + FLAM_C SINE Alu 26 125 -18 1408 142 49 4 chr17 11277315 11277541 -78227012 - L1MC1 LINE L1 -2 6331 6096 233 234 13 26 chr17 11278239 11278316 -78226237 + GA-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 11278737 11278768 -78225785 + AT_rich Low_complexity Low_complexity 1 31 0 1731 183 0 10 chr17 11278773 11279063 -78225490 + AluJo SINE Alu 1 287 -25 201 33 83 33 chr17 11279065 11279125 -78225428 + (TTAA)n Simple_repeat Simple_repeat 2 64 0 30 69 0 0 chr17 11279438 11279496 -78225057 + AT_rich Low_complexity Low_complexity 1 58 0 948 172 0 0 chr17 11279496 11279641 -78224912 - FRAM SINE Alu -31 145 1 264 268 52 10 chr17 11279855 11279952 -78224601 - L1MC4 LINE L1 -15 8027 7927 570 141 9 9 chr17 11280142 11280368 -78224185 + (TA)n Simple_repeat Simple_repeat 1 226 0 551 269 27 36 chr17 11280380 11280646 -78223907 - L1ME3 LINE L1 -303 5818 5599 2297 113 0 0 chr17 11281653 11281955 -78222598 + AluSx SINE Alu 1 302 -10 328 272 8 80 chr17 11282108 11282175 -78222378 + MIR3 SINE MIR 93 148 -60 391 261 5 116 chr17 11282175 11282309 -78222244 + MER5B DNA MER1_type 1 108 -70 2418 80 3 0 chr17 11282309 11282608 -78221945 - AluSp SINE Alu -13 300 1 391 261 5 116 chr17 11282608 11282672 -78221881 + MER5B DNA MER1_type 108 177 -1 328 272 8 80 chr17 11282672 11282729 -78221824 + MIR3 SINE MIR 148 208 0 486 222 77 26 chr17 11282849 11282966 -78221587 + L2 LINE L2 3148 3270 -2 2296 72 24 0 chr17 11283208 11283498 -78221055 - AluSx SINE Alu -15 297 1 2345 48 4 0 chr17 11284688 11284956 -78219597 + AluY SINE Alu 39 307 -4 432 0 0 0 chr17 11285063 11285111 -78219442 + (TG)n Simple_repeat Simple_repeat 2 49 0 1217 166 50 22 chr17 11285572 11285850 -78218703 - L1MB7 LINE L1 -11 6173 5888 239 167 62 0 chr17 11287029 11287077 -78217476 + L2 LINE L2 3257 3307 -6 309 202 11 35 chr17 11287773 11287875 -78216678 - MIR SINE MIR -64 144 91 1662 145 7 35 chr17 11287887 11288177 -78216376 + AluJb SINE Alu 1 282 -30 503 69 14 0 chr17 11288177 11288249 -78216304 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 304 325 79 50 chr17 11288487 11288767 -78215786 + L3 LINE CR1 1179 1466 -111 1397 130 38 61 chr17 11288812 11288962 -78215591 + AluJb SINE Alu 1 153 -159 2486 43 13 20 chr17 11288962 11289262 -78215291 + AluY SINE Alu 1 298 -13 237 33 0 0 chr17 11289266 11289296 -78215257 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1397 130 38 61 chr17 11289296 11289401 -78215152 + AluJb SINE Alu 156 255 -57 656 204 34 40 chr17 11289518 11289694 -78214859 - MER5B DNA MER1_type -3 175 1 695 169 38 172 chr17 11290356 11290436 -78214117 + MER96B DNA MER1_type? 5 94 -323 2515 76 0 6 chr17 11290436 11290750 -78213803 + AluSx SINE Alu 1 312 0 695 169 38 172 chr17 11290750 11290936 -78213617 + MER96B DNA MER1_type? 94 235 -182 307 28 0 0 chr17 11291076 11291112 -78213441 + AluY SINE Alu 12 47 -254 2588 33 17 0 chr17 11291566 11291865 -78212688 - AluY SINE Alu -7 304 1 2643 59 0 0 chr17 11291873 11292179 -78212374 - AluY SINE Alu -5 306 1 271 0 51 0 chr17 11292189 11292228 -78212325 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2174 104 37 0 chr17 11292261 11292558 -78211995 - AluSc SINE Alu -1 308 1 180 152 0 0 chr17 11292624 11292657 -78211896 + CT-rich Low_complexity Low_complexity 1 33 0 2278 132 0 0 chr17 11292657 11292968 -78211585 - AluSx SINE Alu -1 311 1 189 121 0 0 chr17 11293235 11293268 -78211285 + (A)n Simple_repeat Simple_repeat 1 33 0 787 229 11 21 chr17 11293323 11293511 -78211042 + MER5A DNA MER1_type 4 189 0 375 295 181 0 chr17 11293522 11293671 -78210882 - MER5A DNA MER1_type -3 186 11 322 302 52 9 chr17 11293703 11293819 -78210734 - MER5A DNA MER1_type -10 179 59 398 239 25 86 chr17 11293854 11293976 -78210577 + MER5A DNA MER1_type 37 148 -41 2293 126 0 0 chr17 11293976 11294278 -78210275 + AluSg SINE Alu 1 302 -8 398 239 25 86 chr17 11294278 11294318 -78210235 + MER5A DNA MER1_type 148 189 0 2156 117 0 0 chr17 11294754 11295057 -78209496 + AluSg SINE Alu 1 303 0 2212 132 0 6 chr17 11298488 11298799 -78205754 + AluSx SINE Alu 1 309 -3 234 197 287 23 chr17 11299204 11299298 -78205255 + MIR SINE MIR 42 149 -63 2497 75 0 0 chr17 11299891 11300186 -78204367 - AluSc SINE Alu -14 295 1 787 233 47 50 chr17 11300186 11300319 -78204234 - L1MC5 LINE L1 -231 7730 7598 288 0 0 0 chr17 11300319 11300351 -78204202 + (TG)n Simple_repeat Simple_repeat 2 33 0 787 233 47 50 chr17 11300351 11300535 -78204018 - L1MC5 LINE L1 -363 7598 7414 190 333 128 10 chr17 11300832 11300934 -78203619 + L2 LINE L2 3151 3264 -8 2840 53 11 5 chr17 11301795 11302175 -78202378 - L1PA8 LINE L1 -10 6162 5781 264 302 206 0 chr17 11302190 11302316 -78202237 + MIR3 SINE MIR 32 183 -25 2267 95 0 38 chr17 11303339 11303654 -78200899 + AluSq SINE Alu 1 303 -10 1741 187 11 0 chr17 11304860 11305190 -78199363 - AluJb SINE Alu 0 333 1 2136 106 42 0 chr17 11305701 11305984 -78198569 + AluSq SINE Alu 1 295 -18 405 261 56 21 chr17 11307411 11307553 -78197000 - MIR3 SINE MIR -28 180 34 254 311 57 19 chr17 11308651 11308757 -78195796 - L2 LINE L2 -1 3271 3162 1877 101 8 0 chr17 11308814 11309052 -78195501 + AluSg SINE Alu 1 240 -70 189 0 0 0 chr17 11309060 11309081 -78195472 + (A)n Simple_repeat Simple_repeat 1 21 0 2362 85 0 7 chr17 11309405 11309699 -78194854 + AluSg SINE Alu 1 292 -18 2509 78 0 0 chr17 11309835 11310131 -78194422 - AluSq SINE Alu -17 296 1 191 273 0 0 chr17 11312003 11312047 -78192506 + L3 LINE CR1 1530 1573 -4 454 343 64 6 chr17 11313480 11313652 -78190901 - MIR3 SINE MIR -10 198 17 2348 108 0 0 chr17 11314280 11314585 -78189968 - AluY SINE Alu -6 305 1 2464 90 0 0 chr17 11316145 11316445 -78188108 - AluSc SINE Alu -9 300 1 2298 113 10 0 chr17 11316649 11316951 -78187602 + AluSx SINE Alu 1 305 -7 686 130 19 0 chr17 11317816 11317924 -78186629 - AluSx SINE Alu -17 293 184 2059 119 18 7 chr17 11317924 11318202 -78186351 + AluSx SINE Alu 1 281 -31 1462 99 26 0 chr17 11318202 11318394 -78186159 - AluSx SINE Alu -115 197 1 1914 164 0 7 chr17 11319543 11319847 -78184706 + AluJb SINE Alu 7 308 -4 2481 54 0 0 chr17 11320300 11320613 -78183940 - AluSc SINE Alu 0 314 2 610 345 47 12 chr17 11320690 11321286 -78183267 + L2 LINE L2 2624 3234 -79 2354 89 3 0 chr17 11321455 11321746 -78182807 - AluSp SINE Alu -21 292 1 2412 82 0 16 chr17 11322731 11323047 -78181506 - AluY SINE Alu 0 311 1 1310 176 40 0 chr17 11323341 11323613 -78180940 - L1MA7 LINE L1 0 6291 6009 2273 105 7 0 chr17 11323678 11323974 -78180579 + AluSg SINE Alu 1 298 -12 2469 91 3 0 chr17 11324504 11324812 -78179741 - AluSc SINE Alu 0 309 1 244 309 139 6 chr17 11324814 11324979 -78179574 - MIR SINE MIR -55 207 21 2730 55 0 0 chr17 11325381 11325692 -78178861 - AluY SINE Alu 0 311 1 620 91 0 30 chr17 11326732 11326831 -78177722 - AluY SINE Alu -18 293 198 564 141 25 8 chr17 11326907 11327028 -78177525 + CT-rich Low_complexity Low_complexity 2 124 0 2237 108 7 0 chr17 11328433 11328721 -78175832 - AluSg SINE Alu -20 290 1 2239 113 0 35 chr17 11329015 11329333 -78175220 + AluSq SINE Alu 1 307 -6 27 0 0 0 chr17 11330584 11330611 -78173942 + AT_rich Low_complexity Low_complexity 1 27 0 265 254 0 28 chr17 11330619 11330690 -78173863 + CT-rich Low_complexity Low_complexity 5 73 0 342 367 38 38 chr17 11332792 11333029 -78171524 + MIR SINE MIR 20 256 -6 2413 74 0 7 chr17 11333165 11333462 -78171091 + AluY SINE Alu 1 295 -16 2133 114 0 14 chr17 11333470 11333751 -78170802 + AluSx SINE Alu 1 277 -35 2310 118 0 0 chr17 11333751 11334048 -78170505 - AluSp SINE Alu -16 297 1 261 0 0 0 chr17 11334061 11334090 -78170463 + (A)n Simple_repeat Simple_repeat 1 29 0 2076 157 0 0 chr17 11334781 11335093 -78169460 - AluSx SINE Alu 0 312 1 385 292 99 69 chr17 11335099 11335534 -78169019 - L1MC4 LINE L1 0 8042 7595 2215 128 0 0 chr17 11335576 11335911 -78168642 + AluSx SINE Alu 1 310 -2 208 256 83 107 chr17 11335913 11336034 -78168519 - L2 LINE L2 -21 3251 3134 2424 102 0 0 chr17 11336552 11336857 -78167696 + AluSx SINE Alu 1 305 -7 439 314 17 11 chr17 11337018 11337193 -78167360 - MIR SINE MIR -63 199 24 2357 110 0 0 chr17 11337902 11338212 -78166341 - AluSx SINE Alu 0 312 3 207 250 21 0 chr17 11338251 11338299 -78166254 + MER5B DNA MER1_type 1 49 -129 737 279 139 27 chr17 11338333 11339034 -78165519 + L1MC4a LINE L1 4390 5167 -979 930 202 35 0 chr17 11339069 11339242 -78165311 + AluJo SINE Alu 1 179 -133 1500 155 30 69 chr17 11339242 11339546 -78165007 + AluJo SINE Alu 12 303 -9 1785 255 114 41 chr17 11339605 11340171 -78164382 + L1MC4a LINE L1 5260 5894 -1914 2121 129 3 3 chr17 11340171 11340473 -78164080 + AluSx SINE Alu 1 302 -10 1785 255 114 41 chr17 11340473 11340642 -78163911 + L1MC4a LINE L1 5894 6049 -1759 448 220 114 59 chr17 11340646 11340882 -78163671 + L1MC4a LINE L1 6108 6356 -1452 2041 120 0 0 chr17 11340884 11341160 -78163393 + AluSx SINE Alu 1 276 -36 222 91 0 0 chr17 11341161 11341194 -78163359 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 287 241 21 50 chr17 11341345 11341486 -78163067 + L1MC5 LINE L1 7605 7741 -220 404 233 104 25 chr17 11341554 11341717 -78162836 - L1M LINE L1 -2379 5429 5254 237 292 33 50 chr17 11341758 11341878 -78162675 - MIR SINE MIR -66 196 79 295 150 0 208 chr17 11341997 11342042 -78162511 + MIR3 SINE MIR 113 166 -42 2264 89 0 45 chr17 11342042 11342356 -78162197 + AluSx SINE Alu 1 300 -12 295 150 0 208 chr17 11342356 11342393 -78162160 + MIR3 SINE MIR 166 166 -42 1948 160 0 22 chr17 11342393 11342711 -78161842 + AluJo SINE Alu 1 311 -1 295 150 0 208 chr17 11342711 11342747 -78161806 + MIR3 SINE MIR 165 207 -1 673 203 0 23 chr17 11343243 11343376 -78161177 - FLAM_A SINE Alu 0 133 4 413 255 147 105 chr17 11343553 11343659 -78160894 - L1ME4a LINE L1 -254 5867 5767 2256 92 3 13 chr17 11343659 11343964 -78160589 - AluSx SINE Alu -10 302 1 413 255 147 105 chr17 11343964 11344210 -78160343 - L1ME4a LINE L1 -354 5767 5500 2497 48 0 3 chr17 11344344 11344636 -78159917 - AluY SINE Alu -6 305 15 628 186 93 21 chr17 11345261 11345401 -78159152 - L1ME1 LINE L1 -5 6161 6012 1981 94 0 0 chr17 11345764 11346019 -78158534 - AluSc SINE Alu 0 309 55 397 256 153 22 chr17 11346859 11346903 -78157650 - MER5A DNA MER1_type -21 168 131 2182 84 0 40 chr17 11346903 11347231 -78157322 + AluSq SINE Alu 1 316 0 397 256 153 22 chr17 11347231 11347322 -78157231 - MER5A DNA MER1_type -58 131 14 756 221 55 51 chr17 11348240 11348457 -78156096 - L1ME3 LINE L1 -10 6152 5935 2255 99 26 0 chr17 11348858 11349162 -78155391 - AluSp SINE Alu -1 312 1 230 228 173 24 chr17 11349226 11349353 -78155200 + L1MC5 LINE L1 7786 7931 -30 2198 102 3 13 chr17 11349796 11350109 -78154444 + AluSp SINE Alu 1 310 -3 2498 73 7 0 chr17 11350606 11350909 -78153644 + AluSp SINE Alu 1 305 -8 1844 152 72 35 chr17 11351523 11351727 -78152826 - MLT1B LTR MaLR 0 390 164 2204 99 0 7 chr17 11351727 11352019 -78152534 - AluSx SINE Alu -22 290 1 1844 152 72 35 chr17 11352019 11352189 -78152364 - MLT1B LTR MaLR -226 164 2 25 31 0 0 chr17 11352512 11352544 -78152009 + AT_rich Low_complexity Low_complexity 1 32 0 1376 185 32 50 chr17 11352570 11352851 -78151702 - AluJo SINE Alu -35 277 2 263 329 80 15 chr17 11352874 11353011 -78151542 + MER5A DNA MER1_type 7 152 -37 229 267 133 33 chr17 11355907 11356087 -78148466 - L1MC4a LINE L1 -1777 6031 5834 542 283 57 76 chr17 11356150 11356465 -78148088 - L1MC4a LINE L1 -2149 5659 5351 26 30 0 0 chr17 11356490 11356523 -78148030 + AT_rich Low_complexity Low_complexity 1 33 0 2013 119 0 44 chr17 11358717 11359036 -78145517 + AluSx SINE Alu 1 305 -7 2180 99 31 7 chr17 11359078 11359372 -78145181 + AluSx SINE Alu 1 301 -11 2241 197 55 5 chr17 11360820 11361562 -78142991 + L1ME LINE L1 5023 5834 -332 2829 10 0 0 chr17 11361606 11361911 -78142642 + AluYa5 SINE Alu 1 305 -6 507 242 94 1 chr17 11361926 11362105 -78142448 + L1MA10 LINE L1 5978 6330 -4 4206 155 35 6 chr17 11362465 11363825 -78140728 + L1MA5 LINE L1 4623 6017 -283 354 67 0 0 chr17 11363825 11363869 -78140684 + L1MA5 LINE L1 6249 6293 -7 2039 120 17 3 chr17 11363895 11364187 -78140366 - AluSx SINE Alu -16 296 1 193 327 0 0 chr17 11364315 11364370 -78140183 - MIR SINE MIR -124 84 30 194 273 26 52 chr17 11364515 11364592 -78139961 + MIR SINE MIR 124 198 -64 2453 223 224 64 chr17 11366173 11367167 -78137386 + L1MC4 LINE L1 6461 7743 -299 365 136 0 0 chr17 11367167 11367226 -78137327 + AluSp/q SINE Alu 243 301 -2 2453 223 224 64 chr17 11367226 11367412 -78137141 + L1MC4 LINE L1 7743 7898 -144 23 33 0 0 chr17 11367420 11367450 -78137103 + AT_rich Low_complexity Low_complexity 1 30 0 1280 174 41 0 chr17 11368193 11368435 -78136118 + L1MD3 LINE L1 7734 7985 -10 237 33 0 0 chr17 11368839 11368869 -78135684 + (A)n Simple_repeat Simple_repeat 1 30 0 2247 72 3 0 chr17 11368934 11369226 -78135327 + AluSq SINE Alu 1 293 -20 28 0 0 0 chr17 11371841 11371869 -78132684 + AT_rich Low_complexity Low_complexity 1 28 0 898 214 0 0 chr17 11371894 11372067 -78132486 + FRAM SINE Alu 1 173 -3 2116 103 0 37 chr17 11372282 11372603 -78131950 - AluSc SINE Alu 0 309 1 512 97 0 14 chr17 11373157 11373229 -78131324 + AluJb SINE Alu 40 110 -202 1595 144 0 47 chr17 11373279 11373557 -78130996 + AluJb SINE Alu 40 304 -8 23 0 0 0 chr17 11373720 11373743 -78130810 + AT_rich Low_complexity Low_complexity 1 23 0 2565 45 3 0 chr17 11374108 11374400 -78130153 - AluY SINE Alu -18 293 1 1269 117 66 5 chr17 11374764 11374961 -78129592 + MER46A DNA MER2_type 27 235 -1 431 299 53 24 chr17 11375137 11375344 -78129209 - MLT1K LTR MaLR 0 588 376 768 257 62 55 chr17 11375404 11375661 -78128892 - MLT1K LTR MaLR -328 260 2 287 163 0 0 chr17 11375692 11375741 -78128812 - MER103 DNA DNA -44 122 74 874 154 23 0 chr17 11376834 11376964 -78127589 + FLAM_A SINE Alu 1 133 0 189 0 0 0 chr17 11377258 11377279 -78127274 + (A)n Simple_repeat Simple_repeat 1 21 0 657 286 54 75 chr17 11378466 11378907 -78125646 - L2 LINE L2 -4 3309 2878 767 158 53 18 chr17 11379613 11379784 -78124769 - L1MD1 LINE L1 0 6242 6066 1385 118 5 25 chr17 11379944 11380178 -78124375 + AluSg/x SINE Alu 86 315 0 2478 70 7 0 chr17 11380920 11381222 -78123331 + AluSq SINE Alu 1 304 -9 457 275 56 7 chr17 11381516 11381658 -78122895 - MIR3 SINE MIR -24 184 36 1627 224 56 44 chr17 11381912 11382393 -78122160 - L2 LINE L2 -866 2448 1962 2300 109 0 0 chr17 11382879 11383173 -78121380 - AluSx SINE Alu -18 294 1 2005 213 57 32 chr17 11384758 11385250 -78119303 - MLT1D LTR MaLR -1 504 1 228 305 93 82 chr17 11385436 11385705 -78118848 - L2 LINE L2 -338 2976 2705 2348 104 0 0 chr17 11385760 11386058 -78118495 + AluSx SINE Alu 1 298 -14 30 45 0 0 chr17 11386059 11386103 -78118450 + AT_rich Low_complexity Low_complexity 1 44 0 1453 142 99 0 chr17 11386831 11387133 -78117420 - Charlie5 DNA MER1_type -46 2566 2235 1847 148 7 14 chr17 11387407 11387704 -78116849 + AluJb SINE Alu 1 295 -17 22 0 0 0 chr17 11388372 11388394 -78116159 + AT_rich Low_complexity Low_complexity 1 22 0 334 233 173 33 chr17 11388570 11388720 -78115833 - L1MEc LINE L1 -961 5465 5295 435 287 72 38 chr17 11389356 11389593 -78114960 - L1MEc LINE L1 -1119 5307 5063 4876 250 68 28 chr17 11389605 11390593 -78113960 - L1MEc LINE L1 -1630 4796 3849 2126 87 10 17 chr17 11390593 11390893 -78113660 - AluSq SINE Alu -15 298 1 4876 250 68 28 chr17 11390893 11391929 -78112624 - L1MEc LINE L1 -2577 3849 2659 2017 264 110 37 chr17 11391936 11392029 -78112524 + L1MC4a LINE L1 4900 4985 -1161 1972 78 37 0 chr17 11392029 11392336 -78112217 - AluSg SINE Alu 0 317 1 2017 264 110 37 chr17 11392336 11393436 -78111117 + L1MC4a LINE L1 4985 5397 -749 422 307 115 61 chr17 11393521 11393817 -78110736 + L1MC4a LINE L1 6309 6620 -1188 813 125 0 161 chr17 11393872 11394096 -78110457 + L1MC5 LINE L1 6756 6943 -1018 2282 94 13 0 chr17 11394098 11394406 -78110147 + AluSx SINE Alu 1 312 0 400 186 115 18 chr17 11394449 11394562 -78109991 + L1MC5 LINE L1 7808 7931 -30 429 262 62 55 chr17 11394624 11394757 -78109796 - L1MEc LINE L1 -3930 2677 2546 2189 100 0 7 chr17 11394757 11395066 -78109487 - AluSx SINE Alu -5 307 1 429 262 62 55 chr17 11395066 11395241 -78109312 - L1MEc LINE L1 -4061 2546 2367 345 310 7 13 chr17 11395261 11395416 -78109137 - L1MEc LINE L1 -4324 2283 2130 227 281 34 0 chr17 11395465 11395554 -78108999 - L1MEc LINE L1 -4513 1913 1822 1888 80 11 8 chr17 11395752 11396016 -78108537 - AluSc SINE Alu -10 299 35 2183 105 0 0 chr17 11397071 11397367 -78107186 + AluSg SINE Alu 1 296 -14 306 258 40 24 chr17 11398456 11398580 -78105973 + MLT1K LTR MaLR 460 585 -3 780 143 0 32 chr17 11399953 11400079 -78104474 - FLAM_A SINE Alu -11 122 1 211 312 84 52 chr17 11400120 11400370 -78104183 - L2 LINE L2 -829 2485 2228 2278 96 3 0 chr17 11400650 11400951 -78103602 + AluSp SINE Alu 1 302 -11 2105 111 0 13 chr17 11401066 11401382 -78103171 - AluSx SINE Alu 0 312 1 226 270 79 34 chr17 11401891 11401980 -78102573 - L2 LINE L2 -4 3309 3217 363 198 45 0 chr17 11402993 11403104 -78101449 + GA-rich Low_complexity Low_complexity 2 117 0 2220 60 13 13 chr17 11403104 11403406 -78101147 + AluSq SINE Alu 1 302 -11 405 0 0 0 chr17 11403444 11403489 -78101064 + (TG)n Simple_repeat Simple_repeat 2 46 0 2318 141 34 18 chr17 11404238 11404622 -78099931 + MLT1B LTR MaLR 1 390 0 2207 101 0 10 chr17 11404731 11405039 -78099514 - AluSg SINE Alu -5 305 1 538 325 64 65 chr17 11405060 11405642 -78098911 + MLT1K LTR MaLR 2 582 -6 435 347 104 20 chr17 11407263 11407609 -78096944 - L2 LINE L2 0 3313 2939 2234 101 3 0 chr17 11407718 11408015 -78096538 + AluSx SINE Alu 1 298 -14 352 295 110 39 chr17 11408016 11408270 -78096283 - L2 LINE L2 -534 2780 2509 1734 146 10 17 chr17 11408325 11408620 -78095933 + AluJo SINE Alu 1 293 -19 2291 92 0 7 chr17 11408942 11409248 -78095305 - AluSp SINE Alu -9 304 1 555 292 36 18 chr17 11409466 11409634 -78094919 - MIR SINE MIR -2 260 90 248 114 0 0 chr17 11410220 11410255 -78094298 - U2 snRNA snRNA -153 35 1 843 253 150 39 chr17 11410615 11411002 -78093551 - MLT1C LTR MaLR -2 465 36 303 300 152 17 chr17 11411031 11411203 -78093350 + L2 LINE L2 2445 2659 -655 1226 184 108 54 chr17 11411203 11411572 -78092981 + MLT1B LTR MaLR 1 389 -1 303 300 152 17 chr17 11411572 11411636 -78092917 + L2 LINE L2 2659 2713 -601 853 93 0 31 chr17 11411654 11411815 -78092738 + (TCCC)n Simple_repeat Simple_repeat 4 159 0 746 137 4 40 chr17 11412065 11412350 -78092203 + (TCCC)n Simple_repeat Simple_repeat 1 274 0 335 198 12 93 chr17 11412373 11412459 -78092094 - L2 LINE L2 -44 3269 3191 225 0 0 0 chr17 11412599 11412624 -78091929 + (CA)n Simple_repeat Simple_repeat 1 25 0 218 326 62 51 chr17 11412806 11412984 -78091569 + L2 LINE L2 3118 3297 -16 451 260 28 61 chr17 11413014 11413195 -78091358 - MIR SINE MIR -71 191 17 22 35 0 0 chr17 11413285 11413314 -78091239 + AT_rich Low_complexity Low_complexity 1 29 0 1499 233 30 15 chr17 11413317 11413712 -78090841 + L1ME2 LINE L1 5751 6151 -13 1572 110 0 25 chr17 11413991 11414227 -78090326 + AluSg/x SINE Alu 74 303 -7 473 268 14 21 chr17 11414666 11414820 -78089733 + MIR SINE MIR 36 189 -62 1245 289 217 28 chr17 11414829 11415802 -78088751 + L2 LINE L2 1885 3037 -276 472 104 0 0 chr17 11415806 11415873 -78088680 + THE1C LTR MaLR 309 375 0 561 320 60 35 chr17 11416337 11416621 -78087932 + L2 LINE L2 3023 3313 0 231 36 0 0 chr17 11416966 11416994 -78087559 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 1041 82 24 12 chr17 11416994 11417164 -78087389 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 1075 179 0 0 chr17 11417171 11417350 -78087203 - AluJo SINE Alu -36 276 98 250 140 60 0 chr17 11417426 11417476 -78087077 + Alu SINE Alu 250 302 0 294 29 0 0 chr17 11417883 11417918 -78086635 + (CA)n Simple_repeat Simple_repeat 2 36 0 334 184 0 41 chr17 11417933 11418031 -78086522 + GA-rich Low_complexity Low_complexity 1 94 0 1036 61 0 0 chr17 11418856 11418987 -78085566 + AluSg1 SINE Alu 1 131 -178 1788 142 3 27 chr17 11418991 11419286 -78085267 + AluSx SINE Alu 1 288 -24 201 74 0 0 chr17 11419286 11419313 -78085240 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 396 103 0 0 chr17 11419313 11419371 -78085182 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 440 259 253 17 chr17 11419704 11419878 -78084675 + MIR SINE MIR 8 222 -40 232 389 101 0 chr17 11420347 11420496 -78084057 + L2 LINE L2 3106 3269 -3 386 249 107 53 chr17 11421003 11421172 -78083381 + MLT1K LTR MaLR 404 581 -7 219 376 107 7 chr17 11421176 11421325 -78083228 - L2 LINE L2 -3 3269 3106 188 344 0 0 chr17 11422161 11422222 -78082331 - L2 LINE L2 -7 3265 3205 219 347 11 21 chr17 11422360 11422455 -78082098 - L2 LINE L2 -52 3261 3168 228 278 118 77 chr17 11422777 11422946 -78081607 + MIR3 SINE MIR 30 205 -3 1074 283 16 18 chr17 11423371 11423736 -78080817 + LTR16A LTR ERVL 25 449 -1 439 210 50 10 chr17 11423737 11423837 -78080716 + MIR SINE MIR 85 188 -74 337 200 0 106 chr17 11423916 11424001 -78080552 - MER20 DNA MER1_type -143 76 1 1651 168 0 29 chr17 11424024 11424333 -78080220 + AluJb SINE Alu 5 304 -8 216 67 0 0 chr17 11424989 11425019 -78079534 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2105 86 4 0 chr17 11425153 11425453 -78079100 - AluSx SINE Alu 0 301 1 2325 72 3 10 chr17 11426793 11427099 -78077454 + AluY SINE Alu 1 304 -7 715 182 80 45 chr17 11427328 11427504 -78077049 + MIR SINE MIR 12 192 -67 339 341 0 0 chr17 11428185 11428273 -78076280 + MIR SINE MIR 58 145 -117 445 226 43 86 chr17 11428331 11428517 -78076036 - MER5B DNA MER1_type 0 178 1 613 233 6 6 chr17 11428646 11428826 -78075727 + CT-rich Low_complexity Low_complexity 1 180 0 271 288 0 0 chr17 11428830 11428889 -78075664 + polypyrimidine Low_complexity Low_complexity 2 60 0 663 200 12 6 chr17 11428891 11429061 -78075492 + CT-rich Low_complexity Low_complexity 1 171 0 802 200 51 11 chr17 11429365 11429540 -78075013 - MER5A DNA MER1_type 0 189 8 1197 166 14 9 chr17 11429540 11429757 -78074796 - MER20 DNA MER1_type -1 218 1 1087 216 5 9 chr17 11429820 11430033 -78074520 + MER58A DNA MER1_type 12 223 -1 349 314 142 26 chr17 11430445 11430671 -78073882 - L2 LINE L2 -1 3271 3020 195 69 0 0 chr17 11431412 11431441 -78073112 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 332 230 123 60 chr17 11431511 11431626 -78072927 + MER112 DNA MER1_type 10 116 -144 1868 147 17 0 chr17 11431626 11431925 -78072628 + AluJb SINE Alu 1 304 -8 332 230 123 60 chr17 11431925 11432044 -78072509 + MER112 DNA MER1_type 116 259 -1 325 364 0 0 chr17 11432093 11432269 -78072284 + C-rich Low_complexity Low_complexity 4 179 0 389 347 0 0 chr17 11432291 11432467 -78072086 + C-rich Low_complexity Low_complexity 4 179 0 375 352 0 0 chr17 11432489 11432665 -78071888 + C-rich Low_complexity Low_complexity 4 179 0 2099 108 0 0 chr17 11433048 11433336 -78071217 - AluSg SINE Alu -12 298 11 22 70 0 0 chr17 11433502 11433545 -78071008 + AT_rich Low_complexity Low_complexity 1 43 0 2140 107 7 0 chr17 11433548 11433846 -78070707 - AluSx SINE Alu -12 300 1 952 160 0 0 chr17 11433854 11434004 -78070549 - FRAM SINE Alu -21 155 6 492 314 128 28 chr17 11434040 11434476 -78070077 + LTR67 LTR ERVL 78 557 0 1551 273 66 20 chr17 11435139 11435626 -78068927 - LTR33 LTR ERVL -7 514 6 716 209 142 28 chr17 11435640 11435851 -78068702 - MIR SINE MIR -20 242 8 757 232 40 5 chr17 11435853 11436051 -78068502 - MER3 DNA MER1_type -4 205 1 1978 117 24 0 chr17 11436250 11436420 -78068133 - AluSx SINE Alu -8 304 123 324 0 0 0 chr17 11436420 11436456 -78068097 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1978 117 24 0 chr17 11436456 11436576 -78067977 - AluSx SINE Alu -189 123 7 421 262 150 47 chr17 11437259 11437492 -78067061 - MIR SINE MIR -1 261 5 2438 72 3 0 chr17 11437754 11438045 -78066508 - AluSp SINE Alu -21 292 1 530 296 158 53 chr17 11438094 11438493 -78066060 - L1ME LINE L1 -412 5709 5269 23 0 0 0 chr17 11438685 11438708 -78065845 + AT_rich Low_complexity Low_complexity 1 23 0 731 161 0 8 chr17 11438740 11438858 -78065695 - FLAM_C SINE Alu -25 118 2 2380 106 0 0 chr17 11438929 11439240 -78065313 - AluSx SINE Alu -1 311 1 248 0 31 0 chr17 11439242 11439274 -78065279 + (TA)n Simple_repeat Simple_repeat 2 34 0 922 193 49 67 chr17 11439328 11439551 -78065002 + MER20 DNA MER1_type 1 219 0 361 285 112 65 chr17 11439908 11440122 -78064431 + MIR SINE MIR 20 243 -19 668 208 49 16 chr17 11440289 11440474 -78064079 - MIR SINE MIR -54 208 20 437 282 133 36 chr17 11441251 11441446 -78063107 - MIR SINE MIR -39 223 10 1879 233 122 20 chr17 11441714 11442254 -78062299 + MLT1G1 LTR MaLR 1 595 0 1762 194 0 10 chr17 11442495 11442805 -78061748 - AluJo SINE Alu -1 311 5 386 321 52 36 chr17 11442809 11443058 -78061495 - L3 LINE CR1 -193 1384 1132 935 162 181 0 chr17 11443420 11443630 -78060923 - L1MB5 LINE L1 -90 6084 5837 512 264 277 3 chr17 11443933 11444106 -78060447 + L2 LINE L2 2919 3043 -270 231 36 0 0 chr17 11444106 11444134 -78060419 + (TG)n Simple_repeat Simple_repeat 2 29 0 512 264 277 3 chr17 11444134 11444270 -78060283 + L2 LINE L2 3043 3313 0 237 207 0 0 chr17 11444886 11444968 -78059585 + (TG)n Simple_repeat Simple_repeat 1 82 0 718 265 6 6 chr17 11445138 11445304 -78059249 + MER5B DNA MER1_type 1 166 -12 275 312 10 67 chr17 11445357 11445524 -78059029 + MIR3 SINE MIR 44 196 -51 667 204 74 19 chr17 11445832 11445994 -78058559 + FRAM SINE Alu 1 168 -8 1165 157 25 20 chr17 11447400 11447417 -78057136 - AluJo SINE Alu 0 312 297 2202 115 0 37 chr17 11447417 11447738 -78056815 - AluSc SINE Alu 0 309 1 1165 157 25 20 chr17 11447738 11447917 -78056636 - AluJo SINE Alu -15 297 115 2253 93 0 17 chr17 11448091 11448391 -78056162 + AluSq SINE Alu 1 295 -18 258 324 75 30 chr17 11448422 11448589 -78055964 + L2 LINE L2 2865 3036 -236 466 309 146 20 chr17 11448811 11449112 -78055441 + MLT1H LTR MaLR 210 548 -1 433 245 29 7 chr17 11449140 11449279 -78055274 - LTR37B LTR ERV1 -111 357 216 573 144 0 0 chr17 11449685 11449775 -78054778 + AluS SINE Alu 222 311 -1 2306 95 0 0 chr17 11449983 11450292 -78054261 + AluSq SINE Alu 3 311 0 351 276 40 84 chr17 11450356 11450581 -78053972 + L2 LINE L2 3025 3239 -33 731 217 38 38 chr17 11450704 11450861 -78053692 - MER63A DNA MER1_type -1478 210 51 2204 113 3 7 chr17 11450861 11451154 -78053399 - AluSg SINE Alu -18 292 1 731 217 38 38 chr17 11451154 11451180 -78053373 - MER63A DNA MER1_type -1636 52 27 283 174 0 87 chr17 11451266 11451358 -78053195 + MER58 DNA MER1_type 45 128 -87 248 228 18 0 chr17 11451361 11451418 -78053135 + GA-rich Low_complexity Low_complexity 3 60 0 394 227 0 3 chr17 11451424 11451511 -78053042 + MER58 DNA MER1_type 257 2420 0 2319 86 7 0 chr17 11451561 11451852 -78052701 - AluSx SINE Alu -19 293 1 23 0 0 0 chr17 11452382 11452405 -78052148 + AT_rich Low_complexity Low_complexity 1 23 0 2503 247 76 21 chr17 11452405 11453219 -78051334 - L1ME1 LINE L1 -18 6217 5359 2255 123 7 3 chr17 11453245 11453555 -78050998 - AluSq SINE Alu -2 311 1 380 294 27 41 chr17 11453560 11453781 -78050772 - L1ME1 LINE L1 -2629 3586 3369 1375 185 0 16 chr17 11453782 11454025 -78050528 - AluJb SINE Alu -4 308 70 1849 231 122 15 chr17 11454025 11454661 -78049892 - L1M4 LINE L1 -953 5193 4480 297 75 0 0 chr17 11454661 11454701 -78049852 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1849 231 122 15 chr17 11454701 11454736 -78049817 - L1M4 LINE L1 -1666 4480 4450 252 260 13 0 chr17 11454738 11454815 -78049738 - L1M4 LINE L1 -2625 3521 3444 1246 224 42 70 chr17 11454882 11455506 -78049047 - L1M4 LINE L1 -2693 3453 2848 * 1314 272 48 45 chr17 11455481 11456058 -78048495 - L1ME1 LINE L1 -4346 1914 1388 2336 270 44 30 chr17 11456061 11456776 -78047777 - L1ME1 LINE L1 -5517 879 150 2415 88 3 0 chr17 11456776 11457073 -78047480 - AluSp SINE Alu -15 298 1 2336 270 44 30 chr17 11457073 11457182 -78047371 - L1ME1 LINE L1 -6246 150 44 180 286 71 14 chr17 11457208 11457278 -78047275 + MER5B DNA MER1_type 1 74 -104 * 211 272 163 11 chr17 11457228 11457320 -78047233 - MER5A DNA MER1_type -22 167 62 263 128 0 0 chr17 11457569 11457608 -78046945 + MIR SINE MIR 224 262 0 424 244 94 47 chr17 11457640 11457767 -78046786 - MIR3 SINE MIR -63 145 13 342 0 0 0 chr17 11457821 11457859 -78046694 + (TG)n Simple_repeat Simple_repeat 2 39 0 2464 84 10 0 chr17 11458786 11459096 -78045457 - AluSp SINE Alu 0 313 1 253 263 149 97 chr17 11459658 11459772 -78044781 + MIR SINE MIR 17 136 -72 2268 109 0 0 chr17 11459796 11460125 -78044428 + AluSx SINE Alu 1 329 0 785 144 36 93 chr17 11461709 11461754 -78042799 - MER5A DNA MER1_type 0 189 143 2384 90 0 3 chr17 11461754 11462054 -78042499 - AluSc SINE Alu -10 299 1 785 144 36 93 chr17 11462054 11462202 -78042351 - MER5A DNA MER1_type -46 143 7 448 190 40 30 chr17 11462711 11462811 -78041742 - MER5A DNA MER1_type -5 184 84 537 230 9 18 chr17 11462816 11462929 -78041624 + MER81 DNA DNA 1 112 -2 484 141 0 0 chr17 11462946 11463017 -78041536 - MER5A DNA MER1_type -118 71 1 2073 104 47 0 chr17 11464738 11465017 -78039536 - AluSp SINE Alu -9 304 13 181 260 60 0 chr17 11465129 11465179 -78039374 - MIR SINE MIR -110 98 46 456 291 30 0 chr17 11465617 11465751 -78038802 + MIR3 SINE MIR 15 152 -56 627 195 122 24 chr17 11465765 11465873 -78038680 + MER5A DNA MER1_type 7 138 -51 1838 172 3 3 chr17 11465873 11466164 -78038389 - AluJb SINE Alu -10 302 12 627 195 122 24 chr17 11466164 11466219 -78038334 + MER5A DNA MER1_type 138 186 -3 2101 112 0 0 chr17 11466239 11466516 -78038037 + AluSg SINE Alu 24 300 -10 2359 98 0 0 chr17 11467582 11467877 -78036676 - AluSc SINE Alu -10 299 5 431 303 114 37 chr17 11468286 11468557 -78035996 + L3 LINE CR1 780 1071 -506 377 315 82 35 chr17 11469152 11469384 -78035169 + MIR SINE MIR 14 256 -6 1185 225 9 0 chr17 11470001 11470223 -78034330 - MER58A DNA MER1_type 0 224 1 499 286 0 92 chr17 11470233 11470429 -78034124 + MIR SINE MIR 20 197 -65 453 189 0 0 chr17 11470472 11470567 -78033986 + CT-rich Low_complexity Low_complexity 3 97 0 275 196 26 0 chr17 11471722 11471875 -78032678 + (TG)n Simple_repeat Simple_repeat 1 157 0 220 157 39 0 chr17 11471901 11471952 -78032601 + (TG)n Simple_repeat Simple_repeat 2 54 0 2126 141 0 0 chr17 11472328 11472633 -78031920 - AluSx SINE Alu -7 305 1 2612 40 0 3 chr17 11473070 11473367 -78031186 - AluY SINE Alu -15 296 1 669 266 29 34 chr17 11473757 11473964 -78030589 - MIR SINE MIR -51 211 6 491 255 79 123 chr17 11474095 11474180 -78030373 + L2 LINE L2 2677 2764 -508 2424 58 41 0 chr17 11474180 11474473 -78030080 - AluYa5 SINE Alu -6 305 1 491 255 79 123 chr17 11474473 11474919 -78029634 + L2 LINE L2 2764 3185 -87 2044 144 3 3 chr17 11474919 11475218 -78029335 - AluSx SINE Alu -13 299 1 491 255 79 123 chr17 11475218 11475267 -78029286 + L2 LINE L2 3185 3235 -37 370 285 78 6 chr17 11475465 11475620 -78028933 - MIR SINE MIR -55 207 44 185 287 198 0 chr17 11476475 11476576 -78027977 - MIR3 SINE MIR 0 208 88 226 318 47 0 chr17 11478134 11478219 -78026334 + MIR SINE MIR 65 153 -109 2125 120 7 13 chr17 11478273 11478573 -78025980 - AluSq SINE Alu -15 298 1 261 303 0 0 chr17 11479051 11479117 -78025436 - MER81 DNA DNA -43 71 6 2311 141 59 26 chr17 11479636 11480085 -78024468 - MLT1C LTR MaLR -8 459 1 206 128 51 0 chr17 11480454 11480493 -78024060 - L2 LINE L2 -8 3305 3265 533 187 285 0 chr17 11481172 11481295 -78023258 + MIR SINE MIR 60 217 -45 1530 58 0 21 chr17 11481806 11481994 -78022559 + AluY SINE Alu 110 293 -18 243 247 79 11 chr17 11482019 11482108 -78022445 + MER113 DNA MER1_type? 149 243 -278 909 174 5 85 chr17 11482113 11482221 -78022332 - MER58A DNA MER1_type -2196 224 109 2173 107 54 48 chr17 11482221 11482594 -78021959 + THE1C LTR MaLR 1 375 0 909 174 5 85 chr17 11482594 11482657 -78021896 - MER58A DNA MER1_type -2311 109 43 1919 120 8 0 chr17 11482657 11482915 -78021638 + AluSx SINE Alu 23 282 -30 231 61 0 0 chr17 11482916 11482949 -78021604 + (CAAAC)n Simple_repeat Simple_repeat 3 35 0 909 174 5 85 chr17 11482949 11482986 -78021567 - MER58A DNA MER1_type -2376 44 30 362 281 100 19 chr17 11482996 11483156 -78021397 + MER113 DNA MER1_type? 247 419 -102 246 254 14 28 chr17 11483740 11483811 -78020742 - MIR SINE MIR -94 114 45 2157 121 3 17 chr17 11483938 11484235 -78020318 - AluSx SINE Alu -19 293 1 21 36 0 0 chr17 11484235 11484263 -78020290 + AT_rich Low_complexity Low_complexity 1 28 0 3668 165 12 49 chr17 11484263 11484850 -78019703 - L1MB3 LINE L1 0 6183 5629 2233 108 0 0 chr17 11484850 11485145 -78019408 - AluSx SINE Alu -17 295 1 3668 165 12 49 chr17 11485145 11485309 -78019244 - L1MB3 LINE L1 -554 5629 5460 2166 69 0 4 chr17 11486218 11486479 -78018074 + AluY SINE Alu 37 296 -15 228 329 38 13 chr17 11486627 11486785 -78017768 - L2 LINE L2 -225 3047 2886 45 0 0 0 chr17 11486871 11486916 -78017637 + AT_rich Low_complexity Low_complexity 1 45 0 2301 97 0 0 chr17 11486916 11487205 -78017348 + AluSg SINE Alu 1 289 -21 251 41 0 61 chr17 11487205 11487254 -78017299 - L1PA8 LINE L1 -1 6171 6126 * 1007 46 0 0 chr17 11487240 11487370 -78017183 + L1P3 LINE L1 5615 5744 -428 414 189 179 0 chr17 11487665 11487771 -78016782 - L1MB1 LINE L1 -38 6151 6027 678 280 75 51 chr17 11488045 11488417 -78016136 + L2 LINE L2 2933 3313 0 629 218 6 32 chr17 11489209 11489365 -78015188 - MLT1A1 LTR MaLR 0 365 214 198 288 41 0 chr17 11489367 11489440 -78015113 - MIR SINE MIR -158 104 29 2366 96 0 0 chr17 11489445 11489738 -78014815 - AluSg SINE Alu -17 293 1 595 264 86 84 chr17 11490274 11490762 -78013791 - MLT1J LTR MaLR -20 491 3 1863 171 37 100 chr17 11490922 11491031 -78013522 + MLT1D LTR MaLR 1 115 -390 2268 171 8 0 chr17 11491031 11491416 -78013137 + MLT1B LTR MaLR 1 388 -2 1863 171 37 100 chr17 11491416 11491844 -78012709 + MLT1D LTR MaLR 115 504 -1 209 351 34 34 chr17 11491864 11492012 -78012541 - L2 LINE L2 -1067 2247 2100 2143 126 0 0 chr17 11493450 11493751 -78010802 - AluSx SINE Alu -10 302 2 308 314 100 18 chr17 11494043 11494263 -78010290 + MIR SINE MIR 19 256 -6 550 285 168 14 chr17 11494460 11494674 -78009879 + MIR SINE MIR 16 262 0 2260 112 0 3 chr17 11499087 11499399 -78005154 - AluSx SINE Alu -1 311 1 670 297 38 0 chr17 11499428 11499613 -78004940 + MIR SINE MIR 59 250 -12 524 287 66 6 chr17 11499670 11499862 -78004691 - MIR SINE MIR -32 230 26 2298 112 3 0 chr17 11499951 11500247 -78004306 - AluSp SINE Alu -16 297 1 2511 96 0 0 chr17 11500597 11500910 -78003643 - AluSq SINE Alu 0 313 1 187 333 51 34 chr17 11502327 11502444 -78002109 + L3 LINE CR1 1222 1340 -237 195 297 47 0 chr17 11502612 11502676 -78001877 - MIR3 SINE MIR -50 158 92 450 29 44 0 chr17 11503093 11503161 -78001392 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 567 278 78 22 chr17 11503496 11503726 -78000827 + MIR SINE MIR 20 262 0 213 245 57 0 chr17 11503726 11503779 -78000774 + MIR SINE MIR 96 151 -57 748 207 5 92 chr17 11503926 11504143 -78000410 - MER20 DNA MER1_type 0 219 22 199 356 87 9 chr17 11504169 11504284 -78000269 + L2 LINE L2 3132 3255 -17 1427 209 95 50 chr17 11504421 11504862 -77999691 + MLT1C LTR MaLR 7 467 0 672 223 102 51 chr17 11505172 11505331 -77999222 + L1ME3A LINE L1 5881 6061 -109 2405 81 3 3 chr17 11505331 11505628 -77998925 - AluSp SINE Alu -16 297 1 672 223 102 51 chr17 11505628 11505742 -77998811 + L1ME3A LINE L1 6061 6168 -2 308 256 66 33 chr17 11505743 11505864 -77998689 + L1MC5 LINE L1 7508 7632 -329 2078 241 98 39 chr17 11506211 11506602 -77997951 + L1ME2 LINE L1 4846 5213 -951 2048 130 3 20 chr17 11506602 11506901 -77997652 + AluSx SINE Alu 1 294 -18 2078 241 98 39 chr17 11506901 11507722 -77996831 + L1ME2 LINE L1 5213 6127 -37 2394 93 3 0 chr17 11507722 11508024 -77996529 - AluY SINE Alu -7 304 2 787 260 12 53 chr17 11508391 11508660 -77995893 - MIR SINE MIR 0 262 7 261 267 93 0 chr17 11508943 11509018 -77995535 - MIR SINE MIR -70 192 111 2343 100 3 0 chr17 11509039 11509338 -77995215 - AluSq SINE Alu -13 300 1 772 214 21 11 chr17 11509524 11509711 -77994842 + MER53 DNA DNA 1 189 0 349 253 11 21 chr17 11512715 11512810 -77991743 - MIR SINE MIR -10 252 159 387 238 69 75 chr17 11512824 11512984 -77991569 + MIR SINE MIR 74 232 -30 590 239 9 0 chr17 11513353 11513466 -77991087 + MER81 DNA DNA 1 114 0 1926 131 7 30 chr17 11513580 11513878 -77990675 - AluJb SINE Alu -21 291 1 22 0 0 0 chr17 11514014 11514036 -77990517 + AT_rich Low_complexity Low_complexity 1 22 0 251 129 129 59 chr17 11514042 11514127 -77990426 - L1MC5 LINE L1 -44 7917 7827 1021 129 19 57 chr17 11514157 11514217 -77990336 + Tigger2 DNA MER2_type 1 62 -2656 1774 174 7 3 chr17 11514217 11514510 -77990043 - AluJo SINE Alu -18 294 1 1021 129 19 57 chr17 11514510 11514658 -77989895 + Tigger2 DNA MER2_type 62 201 -2517 1926 99 64 32 chr17 11514658 11514940 -77989613 + AluY SINE Alu 1 291 -20 694 229 14 0 chr17 11514972 11515116 -77989437 + Tigger2 DNA MER2_type 2564 2709 -9 2013 150 7 3 chr17 11515333 11515640 -77988913 - AluJo SINE Alu -4 308 1 321 327 34 14 chr17 11515652 11515860 -77988693 - L1MC5 LINE L1 -371 7590 7379 218 300 50 12 chr17 11515874 11515954 -77988599 + L2 LINE L2 3172 3254 -18 2375 87 7 3 chr17 11516145 11516485 -77988068 - AluY SINE Alu 0 341 1 2653 147 10 77 chr17 11516485 11517071 -77987482 + LTR36 LTR ERV1 9 555 -56 225 0 0 0 chr17 11517644 11517669 -77986884 + (T)n Simple_repeat Simple_repeat 1 25 0 979 193 0 0 chr17 11518953 11519124 -77985429 + AluJb SINE Alu 130 300 -12 1929 142 0 10 chr17 11519177 11519466 -77985087 + AluSq SINE Alu 26 311 -2 216 233 0 0 chr17 11519542 11519615 -77984938 + (TGG)n Simple_repeat Simple_repeat 3 75 0 747 209 0 0 chr17 11519627 11520153 -77984400 + (TGG)n Simple_repeat Simple_repeat 1 526 0 338 346 0 0 chr17 11520194 11520330 -77984223 + (TGG)n Simple_repeat Simple_repeat 3 138 0 250 202 11 11 chr17 11520348 11520437 -77984116 + (TGG)n Simple_repeat Simple_repeat 1 89 0 300 142 15 5 chr17 11520952 11521016 -77983537 - Alu SINE Alu -253 46 3 1931 144 26 15 chr17 11521017 11521541 -77983012 - L1P4 LINE L1 -700 5466 4938 958 101 20 0 chr17 11521708 11521856 -77982697 - L1PB2 LINE L1 -2 6149 5999 688 109 0 0 chr17 11521858 11521959 -77982594 - L1PB2 LINE L1 -410 5741 5641 1720 227 99 15 chr17 11522059 11522629 -77981924 - MLT2F LTR ERVL -41 611 1 2446 23 0 0 chr17 11522854 11523154 -77981399 + L1P2 LINE L1 5275 5574 -580 326 242 10 61 chr17 11524290 11524389 -77980164 + HAL1b LINE L1 814 907 -441 1599 173 94 15 chr17 11524585 11524926 -77979627 + MLT1B LTR MaLR 23 390 0 231 326 76 101 chr17 11526259 11526535 -77978018 - L2 LINE L2 -4 3268 3000 1831 101 0 0 chr17 11527349 11527586 -77976967 + AluSg/x SINE Alu 74 310 0 1201 261 36 29 chr17 11527589 11528003 -77976550 - MLT1J2 LTR MaLR -33 417 1 2442 217 55 15 chr17 11528038 11528582 -77975971 - MLT1F1 LTR MaLR 0 567 2 349 258 18 96 chr17 11528810 11528977 -77975576 + MLT1J LTR MaLR 339 492 -19 233 136 45 23 chr17 11529009 11529053 -77975500 - L2 LINE L2 -23 3249 3205 2396 77 6 13 chr17 11529081 11529394 -77975159 + AluY SINE Alu 1 311 0 741 259 6 0 chr17 11530781 11530943 -77973610 - MER5A DNA MER1_type -14 175 13 1011 169 28 5 chr17 11530968 11530981 -77973572 - MER5A DNA MER1_type -2 181 170 2494 155 57 0 chr17 11530981 11531387 -77973166 - MSTB1 LTR MaLR 0 432 4 1011 169 28 5 chr17 11531387 11531560 -77972993 - MER5A DNA MER1_type -13 170 9 392 242 71 9 chr17 11531630 11531844 -77972709 + MER115 DNA AcHobo 136 435 -258 569 348 25 16 chr17 11531920 11532164 -77972389 + MIR SINE MIR 8 253 -9 806 250 9 24 chr17 11532759 11532971 -77971582 + MER3 DNA MER1_type 1 209 0 599 331 106 35 chr17 11533220 11533731 -77970822 + L1ME4a LINE L1 4348 4894 -1252 315 284 71 98 chr17 11533744 11533927 -77970626 + L1ME4a LINE L1 5702 5879 -242 883 135 0 8 chr17 11533960 11534093 -77970460 + AluSq/x SINE Alu 1 132 -180 2132 138 44 0 chr17 11534397 11534694 -77969859 - AluSx SINE Alu -2 310 1 670 297 38 0 chr17 11534723 11534908 -77969645 + MIR SINE MIR 59 250 -12 524 287 66 6 chr17 11534965 11535157 -77969396 - MIR SINE MIR -32 230 26 2138 108 4 4 chr17 11535246 11535525 -77969028 - AluSp SINE Alu -16 297 19 2455 56 0 20 chr17 11535725 11536028 -77968525 - AluY SINE Alu -14 297 1 665 160 9 0 chr17 11536073 11536179 -77968374 - U6 snRNA snRNA 0 107 1 2281 114 0 3 chr17 11536681 11536979 -77967574 - AluSq SINE Alu -16 297 1 241 248 33 111 chr17 11537878 11537995 -77966558 + MIR3 SINE MIR 7 108 -127 4536 44 0 4 chr17 11537995 11538537 -77966016 - L1PA5 LINE L1 0 6154 5615 241 248 33 111 chr17 11538537 11538582 -77965971 + MIR3 SINE MIR 108 155 -80 196 247 161 0 chr17 11539453 11539534 -77965019 + L2 LINE L2 2067 2160 -1154 297 244 0 24 chr17 11540487 11540569 -77963984 - L2 LINE L2 -1 3312 3233 870 331 106 20 chr17 11540650 11540798 -77963755 + L2 LINE L2 1925 2059 -1255 2115 132 30 48 chr17 11540798 11541169 -77963384 - THE1B LTR MaLR 0 364 1 870 331 106 20 chr17 11541169 11541756 -77962797 + L2 LINE L2 2059 2723 -591 228 266 0 31 chr17 11541856 11541920 -77962633 + MLT1K LTR MaLR 181 242 -346 266 150 25 38 chr17 11542000 11542080 -77962473 + CT-rich Low_complexity Low_complexity 2 80 0 2403 150 36 20 chr17 11542084 11542523 -77962030 - L1MA9 LINE L1 -4 6308 5863 2738 96 0 3 chr17 11542523 11542879 -77961674 + THE1A LTR MaLR 1 355 0 249 228 38 13 chr17 11543121 11543200 -77961353 + MLT1L LTR MaLR 535 615 0 204 339 9 9 chr17 11543576 11543685 -77960868 + L2 LINE L2 3201 3309 -4 218 324 0 29 chr17 11543691 11543796 -77960757 - L2 LINE L2 -177 3095 2994 263 181 11 64 chr17 11544773 11544867 -77959686 + GA-rich Low_complexity Low_complexity 2 90 0 1582 236 64 18 chr17 11545187 11545523 -77959030 - MLT1D LTR MaLR -45 460 98 2008 132 76 20 chr17 11545523 11545865 -77958688 + THE1B LTR MaLR 4 364 0 1582 236 64 18 chr17 11545865 11545964 -77958589 - MLT1D LTR MaLR -407 98 5 291 238 140 20 chr17 11546108 11546216 -77958337 + MIR SINE MIR 46 162 -46 186 224 0 0 chr17 11546272 11546321 -77958232 + T-rich Low_complexity Low_complexity 3 51 0 3629 61 2 7 chr17 11546753 11547215 -77957338 - L1PA8 LINE L1 -1 6171 5712 316 297 142 7 chr17 11547633 11547781 -77956772 + MIR SINE MIR 23 190 -72 435 297 97 7 chr17 11548852 11549007 -77955546 + MIR SINE MIR 20 188 -74 1265 218 65 58 chr17 11550471 11550884 -77953669 + L1ME2 LINE L1 5740 6155 -9 2636 80 3 6 chr17 11550944 11551294 -77953259 - L1PA8A LINE L1 0 6131 5783 217 336 87 0 chr17 11552108 11552212 -77952341 - L2 LINE L2 -13 3259 3147 2397 95 20 0 chr17 11552316 11552620 -77951933 + AluSg SINE Alu 1 310 0 1600 149 45 31 chr17 11553104 11553392 -77951161 + AluJb SINE Alu 1 292 -20 543 235 31 43 chr17 11553401 11553563 -77950990 - MIR SINE MIR -26 236 77 353 274 39 92 chr17 11553864 11554017 -77950536 + L2 LINE L2 3123 3267 -5 192 379 19 10 chr17 11555020 11555123 -77949430 + L2 LINE L2 2932 3035 -237 435 314 65 53 chr17 11555454 11555792 -77948761 - MLT1H LTR MaLR -205 344 3 314 278 41 21 chr17 11555916 11556013 -77948540 + L2 LINE L2 3174 3272 0 222 292 45 45 chr17 11556008 11556097 -77948456 - L2 LINE L2 -25 3288 3200 * 305 255 101 43 chr17 11557034 11557222 -77947331 + MIR SINE MIR 64 262 0 404 299 37 49 chr17 11557297 11557461 -77947092 + MIR3 SINE MIR 10 171 -37 285 221 8 102 chr17 11558198 11558325 -77946228 + MIR3 SINE MIR 43 157 -51 * 351 161 12 12 chr17 11558310 11558391 -77946162 - L2 LINE L2 -2506 808 728 2008 157 0 0 chr17 11559229 11559528 -77945025 - AluSx SINE Alu -13 299 1 204 319 0 0 chr17 11559591 11559638 -77944915 + L2 LINE L2 3134 3180 -92 740 288 134 11 chr17 11559733 11560062 -77944491 - L2 LINE L2 -220 3093 2725 354 61 0 0 chr17 11560064 11560113 -77944440 + (GA)n Simple_repeat Simple_repeat 2 50 0 3776 279 85 30 chr17 11560145 11562056 -77942497 - L2 LINE L2 -950 2364 349 407 293 62 47 chr17 11562166 11562422 -77942131 + MIR SINE MIR 1 260 -2 406 278 88 16 chr17 11562467 11562661 -77941892 - L2 LINE L2 -2955 359 152 225 0 0 0 chr17 11563466 11563491 -77941062 + (T)n Simple_repeat Simple_repeat 1 25 0 269 284 30 0 chr17 11563534 11563601 -77940952 + Charlie8 DNA MER1_type 175 243 -2174 2383 92 16 3 chr17 11563645 11563951 -77940602 - AluSq SINE Alu -3 310 1 2888 136 45 0 chr17 11564025 11564488 -77940065 - L1PA16 LINE L1 -3 6163 5680 647 99 0 0 chr17 11564489 11564570 -77939983 - 5S rRNA rRNA -34 87 7 5680 158 6 62 chr17 11564571 11566265 -77938288 - L1PA16 LINE L1 -481 5685 4098 234 0 0 0 chr17 11566712 11566738 -77937815 + (TG)n Simple_repeat Simple_repeat 2 27 0 341 257 44 9 chr17 11566862 11566975 -77937578 + MIR SINE MIR 73 189 -73 317 280 58 111 chr17 11567462 11567705 -77936848 - L2 LINE L2 -12 3260 3031 318 160 0 0 chr17 11567705 11567755 -77936798 + MLT1A1 LTR MaLR 1 50 -315 4079 83 0 0 chr17 11567768 11568300 -77936253 - L1PA13 LINE L1 -2 6161 5630 1718 208 24 15 chr17 11568307 11568639 -77935914 + MLT1A1 LTR MaLR 31 365 0 257 327 26 9 chr17 11568639 11568752 -77935801 - L2 LINE L2 -237 3035 2921 2152 131 0 22 chr17 11569717 11570029 -77934524 + AluSx SINE Alu 3 307 -5 308 103 0 0 chr17 11570840 11570879 -77933674 + MER77 LTR ERV1 105 143 -462 * 2046 165 12 20 chr17 11570877 11571223 -77933330 + MER77 LTR ERV1 263 605 0 210 259 0 0 chr17 11571687 11571741 -77932812 + MIR SINE MIR 179 232 -30 1361 196 310 11 chr17 11571780 11572157 -77932396 + MLT2B1 LTR ERVL 1 490 -64 321 113 25 62 chr17 11572244 11572324 -77932229 + MLT2B1 LTR ERVL 442 518 -2 565 206 0 128 chr17 11573069 11573148 -77931405 + MER5B DNA MER1_type 1 88 -90 2043 92 43 7 chr17 11573148 11573430 -77931123 + AluSx SINE Alu 12 303 -9 565 206 0 128 chr17 11573430 11573554 -77930999 + MER5B DNA MER1_type 88 178 0 1239 147 13 9 chr17 11574104 11574329 -77930224 + L1MB4 LINE L1 5955 6180 0 308 240 21 21 chr17 11574357 11574453 -77930100 - L2 LINE L2 -274 2998 2903 6503 150 15 33 chr17 11574804 11574954 -77929599 - Ricksha_b DNA DNA -1600 1254 1103 2256 104 3 0 chr17 11574954 11575252 -77929301 + AluSg SINE Alu 1 299 -11 6503 150 15 33 chr17 11575252 11576232 -77928321 - Ricksha_b DNA DNA -1751 1103 143 2061 141 29 35 chr17 11576232 11576609 -77927944 - THE1C LTR MaLR 0 375 1 6503 150 15 33 chr17 11576609 11576621 -77927932 - Ricksha_b DNA DNA -2711 143 132 326 346 0 0 chr17 11576629 11576730 -77927823 + MIR3 SINE MIR 54 154 -54 2444 75 0 0 chr17 11576916 11577208 -77927345 + AluY SINE Alu 1 292 -19 320 227 0 0 chr17 11577633 11577699 -77926854 - MER117 DNA MER1_type -47 150 85 277 250 0 0 chr17 11578746 11578810 -77925743 + L1P4 LINE L1 5533 5596 -569 1731 147 10 51 chr17 11580320 11580633 -77923920 + AluJo SINE Alu 1 300 -12 240 293 0 0 chr17 11580693 11580751 -77923802 + L2 LINE L2 2236 2293 -1021 1182 262 86 33 chr17 11581053 11581622 -77922931 - HAL1 LINE L1 -818 1689 1091 7759 31 6 0 chr17 11581654 11582715 -77921838 - L1PA3 LINE L1 -3 6152 5090 7027 26 39 0 chr17 11582715 11583552 -77921001 + L1PA3 LINE L1 4223 5092 -1054 3013 168 11 2 chr17 11583820 11584349 -77920204 - L1MB3 LINE L1 0 6183 5650 953 194 12 0 chr17 11584355 11584520 -77920033 - FAM SINE Alu -8 167 1 2317 103 3 0 chr17 11585280 11585580 -77918973 + AluSx SINE Alu 1 301 -11 2167 108 4 0 chr17 11586203 11586482 -77918071 + AluSp SINE Alu 1 280 -33 193 29 59 0 chr17 11586484 11586518 -77918035 + (CAA)n Simple_repeat Simple_repeat 1 36 0 559 204 72 28 chr17 11586768 11586949 -77917604 - L1ME2 LINE L1 -19 6145 5957 939 246 36 71 chr17 11586977 11587473 -77917080 - PABL_B LTR ERV1 -42 625 3 2478 81 0 3 chr17 11587578 11587887 -77916666 - AluY SINE Alu -1 310 3 910 219 108 14 chr17 11587898 11588177 -77916376 - L1ME2 LINE L1 -260 5904 5600 313 279 87 33 chr17 11588181 11588364 -77916189 - L1ME2 LINE L1 -1712 4434 4242 2083 78 4 0 chr17 11588609 11588864 -77915689 - AluY SINE Alu -55 256 1 440 265 42 58 chr17 11588905 11589094 -77915459 - L2 LINE L2 -15 3298 3113 2192 108 47 0 chr17 11589121 11589417 -77915136 + AluSx SINE Alu 1 310 -2 2507 147 65 161 chr17 11589951 11590756 -77913797 - LTR8A LTR ERV1 0 727 1 232 271 0 153 chr17 11591395 11591442 -77913111 + L2 LINE L2 3192 3212 -101 825 228 68 55 chr17 11591442 11591661 -77912892 + MER58A DNA MER1_type 3 224 0 232 271 0 153 chr17 11591661 11591731 -77912822 + L2 LINE L2 3212 3291 -22 330 331 70 7 chr17 11591963 11592105 -77912448 + L2 LINE L2 3121 3271 -1 24 0 0 0 chr17 11592420 11592444 -77912109 + AT_rich Low_complexity Low_complexity 1 24 0 2317 86 10 22 chr17 11592444 11592757 -77911796 + AluSq SINE Alu 1 309 -4 180 0 0 0 chr17 11592757 11592777 -77911776 + (TA)n Simple_repeat Simple_repeat 2 21 0 1039 137 122 20 chr17 11592782 11592979 -77911574 - L1PB3 LINE L1 -7 6147 5931 547 235 61 0 chr17 11593271 11593403 -77911150 + L1M4 LINE L1 5597 5736 -438 7533 168 60 28 chr17 11593403 11594927 -77909626 + MER4B-int LTR ERV1 3090 4662 -2096 2219 163 62 71 chr17 11594944 11595448 -77909105 + MER4B-int LTR ERV1 5264 5814 -944 5534 78 24 25 chr17 11595448 11595574 -77908979 + MER4E LTR ERV1 1 126 -640 2250 119 6 0 chr17 11595574 11595885 -77908668 - AluSq SINE Alu 0 313 1 5534 78 24 25 chr17 11595885 11596525 -77908028 + MER4E LTR ERV1 126 766 0 2219 163 62 71 chr17 11596525 11596774 -77907779 + MER4B-int LTR ERV1 5814 6064 -694 2458 162 92 0 chr17 11596784 11597198 -77907355 + LTR47A LTR ERVL 1 452 0 2201 123 0 0 chr17 11597320 11597620 -77906933 - AluSx SINE Alu -12 300 1 3861 288 110 14 chr17 11599617 11601221 -77903332 + L2 LINE L2 10 1766 -1548 323 223 143 54 chr17 11601219 11601307 -77903246 - L2 LINE L2 -1390 1924 1823 * 2029 111 4 0 chr17 11601307 11601577 -77902976 + AluSg SINE Alu 39 309 -1 323 223 143 54 chr17 11601577 11601600 -77902953 - L2 LINE L2 -1491 1823 1803 677 256 135 19 chr17 11602498 11602764 -77901789 - MER102b DNA MER1_type -25 316 20 812 205 6 0 chr17 11603148 11603505 -77901048 + (CTCA)n Simple_repeat Simple_repeat 1 358 0 1045 268 89 33 chr17 11603512 11604221 -77900332 - L2 LINE L2 -3 3310 2642 519 60 0 0 chr17 11604221 11604288 -77900265 + (TA)n Simple_repeat Simple_repeat 2 68 0 2207 84 11 0 chr17 11604290 11604576 -77899977 - AluSc SINE Alu -20 289 1 1045 268 89 33 chr17 11604576 11604619 -77899934 - L2 LINE L2 -671 2642 2504 2526 66 0 28 chr17 11605447 11605767 -77898786 - AluY SINE Alu 0 311 1 180 259 86 0 chr17 11605905 11605963 -77898590 + MIR SINE MIR 124 186 -76 267 246 0 14 chr17 11606243 11606312 -77898241 + GA-rich Low_complexity Low_complexity 4 71 0 205 345 0 0 chr17 11607618 11607673 -77896880 - L2 LINE L2 -97 3175 3121 1148 312 101 26 chr17 11607750 11607992 -77896561 - L2 LINE L2 -428 2886 2663 2280 85 0 19 chr17 11607992 11608308 -77896245 - AluY SINE Alu -1 310 1 1148 312 101 26 chr17 11608308 11608859 -77895694 - L2 LINE L2 -651 2663 2034 540 313 0 12 chr17 11609316 11609476 -77895077 + MER5B DNA MER1_type 21 178 0 441 316 59 0 chr17 11610971 11611123 -77893430 - MIR SINE MIR -14 248 88 386 125 0 0 chr17 11611123 11611179 -77893374 - MER20 DNA MER1_type -163 56 1 2279 129 92 32 chr17 11611353 11611757 -77892796 - MSTA LTR MaLR 0 428 1 2065 267 25 15 chr17 11611759 11612279 -77892274 - MER69 DNA AcHobo -698 528 4 1814 113 3 93 chr17 11613043 11613397 -77891156 - AluSx SINE Alu 0 326 1 252 0 0 0 chr17 11613528 11613556 -77890997 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 287 287 78 0 chr17 11614891 11615006 -77889547 + MIR SINE MIR 13 137 -71 270 235 0 44 chr17 11615010 11615078 -77889475 - L2 LINE L2 -1 3271 3207 405 0 0 0 chr17 11615688 11615733 -77888820 + (TG)n Simple_repeat Simple_repeat 2 46 0 2152 111 7 0 chr17 11615733 11616021 -77888532 - AluSg1 SINE Alu -19 290 1 23 54 0 0 chr17 11616025 11616062 -77888491 + AT_rich Low_complexity Low_complexity 1 37 0 382 263 45 39 chr17 11616249 11616428 -77888125 - L1MC/D LINE L1 -1988 5820 5641 585 216 9 26 chr17 11616796 11616912 -77887641 + MER81 DNA DNA 1 114 0 2207 95 0 3 chr17 11618786 11619091 -77885462 + AluSc SINE Alu 1 304 0 183 405 13 0 chr17 11619560 11619639 -77884914 + L3 LINE CR1 1497 1576 -1 1834 174 9 22 chr17 11621516 11621832 -77882721 + AluJb SINE Alu 1 312 0 2398 104 4 21 chr17 11621843 11622557 -77881996 + AluY SINE Alu 1 310 -1 270 343 57 0 chr17 11623543 11623648 -77880905 - L2 LINE L2 -4 3268 3158 967 224 91 118 chr17 11623775 11624239 -77880314 + MLT1K LTR MaLR 133 583 -5 192 344 53 46 chr17 11624335 11624466 -77880087 - L2 LINE L2 -193 3079 2948 1966 127 30 23 chr17 11624487 11624787 -77879766 - AluSx SINE Alu -10 302 1 290 281 226 20 chr17 11625049 11625195 -77879358 + MER5B DNA MER1_type 3 178 0 508 314 71 51 chr17 11625349 11625699 -77878854 - L2 LINE L2 -7 3306 2950 * 1622 263 112 16 chr17 11625693 11626272 -77878281 - L2 LINE L2 -810 2504 1870 6880 234 36 46 chr17 11626471 11627631 -77876922 - L1MCa LINE L1 -1530 4896 3726 2031 122 4 0 chr17 11627631 11627946 -77876607 - AluSg1 SINE Alu 0 316 1 6880 234 36 46 chr17 11627946 11629380 -77875173 - L1MCa LINE L1 -2700 3726 2393 772 196 80 18 chr17 11629378 11629823 -77874730 - L1MCa LINE L1 -4236 2190 1289 * 1898 116 55 10 chr17 11629825 11630117 -77874436 - AluSx SINE Alu -7 305 1 213 276 17 0 chr17 11630301 11630359 -77874194 + GA-rich Low_complexity Low_complexity 2 60 0 486 246 84 18 chr17 11630510 11630740 -77873813 + MIR SINE MIR 11 262 0 2133 132 3 0 chr17 11630915 11631225 -77873328 - AluSq SINE Alu -2 311 1 1727 192 17 59 chr17 11631280 11631687 -77872866 - MLT1B LTR MaLR 0 390 1 263 185 0 37 chr17 11632253 11632307 -77872246 - L2 LINE L2 0 3313 3262 316 291 76 32 chr17 11632908 11633066 -77871487 + L2 LINE L2 3118 3282 -31 375 269 50 62 chr17 11633464 11633624 -77870929 + MER117 DNA MER1_type 11 168 -29 1307 236 20 16 chr17 11633743 11634092 -77870461 - L1ME1 LINE L1 0 6166 5820 536 0 16 0 chr17 11634257 11634321 -77870232 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 494 294 59 11 chr17 11635642 11635829 -77868724 - MIR SINE MIR -38 224 29 1635 184 7 3 chr17 11636172 11636476 -77868077 - AluJo SINE Alu 0 305 1 455 286 78 10 chr17 11636484 11636676 -77867877 - L1ME3A LINE L1 -312 5858 5654 1200 279 74 24 chr17 11636685 11636711 -77867842 + MER20B DNA MER1_type 36 59 -724 2244 123 0 0 chr17 11636711 11637011 -77867542 - AluSx SINE Alu -12 300 1 1200 279 74 24 chr17 11637011 11637446 -77867107 + MER20B DNA MER1_type 59 520 -263 1756 150 18 47 chr17 11637478 11637893 -77866660 + L1MB3 LINE L1 5207 5609 -571 723 209 10 46 chr17 11637905 11638101 -77866452 + L1PBa LINE L1 6 194 -6669 9474 201 97 20 chr17 11638101 11641452 -77863101 + L1PBa LINE L1 906 4525 -2337 2027 141 3 72 chr17 11641455 11641790 -77862763 + L1MB3 LINE L1 5818 6124 -59 2510 66 0 3 chr17 11641790 11642093 -77862460 + AluY SINE Alu 1 302 -9 2027 141 3 72 chr17 11642093 11642146 -77862407 + L1MB3 LINE L1 6124 6179 -4 28 29 0 0 chr17 11642150 11642185 -77862368 + AT_rich Low_complexity Low_complexity 1 35 0 572 226 7 7 chr17 11642431 11642568 -77861985 + MER20B DNA MER1_type 647 783 0 433 267 19 61 chr17 11642568 11642787 -77861766 - L1ME3A LINE L1 -506 5656 5430 1948 166 82 20 chr17 11642787 11643190 -77861363 + MSTA LTR MaLR 1 428 0 433 267 19 61 chr17 11643190 11643260 -77861293 - L1ME3A LINE L1 -732 5430 4891 1519 121 60 4 chr17 11643354 11643603 -77860950 - L1MA5A LINE L1 0 6297 6035 247 147 0 73 chr17 11643606 11643674 -77860879 - L1ME3A LINE L1 -1310 4836 4774 26 30 0 0 chr17 11643891 11643924 -77860629 + AT_rich Low_complexity Low_complexity 1 33 0 1941 191 14 19 chr17 11645204 11645571 -77858982 + MLT1A1 LTR MaLR 1 365 0 1080 256 78 80 chr17 11646226 11646750 -77857803 + L1MCa LINE L1 385 907 -5515 5906 160 49 14 chr17 11646783 11648714 -77855839 + L1PA16 LINE L1 1344 6961 0 2040 222 167 45 chr17 11648706 11649558 -77854995 + L1MCa LINE L1 2003 2958 -3983 * 557 141 0 0 chr17 11649550 11649635 -77854918 + L1PA11 LINE L1 6069 6153 -21 * 1068 299 53 14 chr17 11649677 11650165 -77854388 + L1MCa LINE L1 2960 3466 -3475 * 1633 174 317 27 chr17 11650161 11650684 -77853869 + L1MC3 LINE L1 5270 5944 -1841 216 23 23 47 chr17 11650708 11650751 -77853802 + (TA)n Simple_repeat Simple_repeat 1 42 0 199 0 0 61 chr17 11650821 11650854 -77853699 + (TA)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr17 11651403 11651426 -77853127 + AT_rich Low_complexity Low_complexity 1 23 0 2410 81 3 0 chr17 11651472 11651768 -77852785 - AluSp SINE Alu -16 297 1 235 333 39 0 chr17 11651805 11651883 -77852670 + HAL1 LINE L1 4 84 -2423 705 262 99 0 chr17 11651997 11652230 -77852323 + MLT1H1 LTR MaLR 293 548 -7 228 273 36 18 chr17 11652258 11652368 -77852185 + HAL1 LINE L1 2009 2120 -387 270 81 0 0 chr17 11652410 11652447 -77852106 + (TG)n Simple_repeat Simple_repeat 2 38 0 1309 229 114 35 chr17 11652502 11652974 -77851579 + MER39 LTR ERV1 21 707 0 2349 110 3 0 chr17 11653058 11653368 -77851185 - AluSx SINE Alu -1 311 1 347 349 8 0 chr17 11653632 11653761 -77850792 + MIR3 SINE MIR 48 177 -31 390 209 117 37 chr17 11653780 11653943 -77850610 + L1ME4a LINE L1 5718 5893 -228 191 268 18 0 chr17 11654123 11654179 -77850374 + L2 LINE L2 3035 3091 -181 1039 220 96 0 chr17 11655144 11655362 -77849191 + MER8 DNA MER2_type 1 239 0 2354 67 7 7 chr17 11655650 11655949 -77848604 - AluY SINE Alu -12 299 1 383 329 83 62 chr17 11656176 11656598 -77847955 + L2 LINE L2 2834 3264 -8 220 244 0 0 chr17 11656774 11656815 -77847738 - L2 LINE L2 -95 3177 3137 225 224 20 0 chr17 11657538 11657587 -77846966 + L2 LINE L2 3262 3311 -2 223 228 35 0 chr17 11658211 11658268 -77846285 + L2 LINE L2 2993 3051 -221 1124 201 14 151 chr17 11658670 11658732 -77845821 - MLT1A1 LTR MaLR 0 365 296 1959 138 3 0 chr17 11658732 11659049 -77845504 + AluSg SINE Alu 1 318 0 1124 201 14 151 chr17 11659049 11659408 -77845145 - MLT1A1 LTR MaLR -69 296 1 456 256 16 16 chr17 11660734 11660863 -77843690 + MLT1I LTR MaLR 275 403 -6 2675 165 4 29 chr17 11660918 11661397 -77843156 - MLT1C LTR MaLR 0 467 1 216 202 10 40 chr17 11661501 11661600 -77842953 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 228 111 0 0 chr17 11662753 11662789 -77841764 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 245 300 14 0 chr17 11663043 11663113 -77841440 - MIR SINE MIR -113 149 79 271 279 67 10 chr17 11663158 11663262 -77841291 - L3 LINE CR1 -205 1372 1263 251 281 68 5 chr17 11663846 11663985 -77840568 - MIR3 SINE MIR -44 164 12 189 309 12 12 chr17 11664084 11664165 -77840388 + MIR SINE MIR 164 244 -18 658 327 52 22 chr17 11664362 11664769 -77839784 + L2 LINE L2 1941 2359 -955 2231 113 3 0 chr17 11664779 11665072 -77839481 + AluSq SINE Alu 1 294 -19 331 325 18 43 chr17 11665140 11665303 -77839250 - L2 LINE L2 0 3313 3155 486 266 57 13 chr17 11665316 11665474 -77839079 + L2 LINE L2 2378 2542 -772 33 0 0 0 chr17 11665976 11666009 -77838544 + AT_rich Low_complexity Low_complexity 1 33 0 332 191 16 0 chr17 11666825 11666888 -77837665 + MER69 DNA AcHobo 4 67 -2459 2320 93 0 13 chr17 11667121 11667434 -77837119 + AluSc SINE Alu 1 309 0 333 179 0 0 chr17 11668148 11668204 -77836349 - MER69 DNA AcHobo -112 65 10 291 246 212 0 chr17 11669369 11669487 -77835066 - MER5A DNA MER1_type -1 188 46 347 169 14 0 chr17 11669512 11669583 -77834970 + MER5A DNA MER1_type 4 75 -114 1503 150 3 88 chr17 11669583 11669889 -77834664 + AluJo SINE Alu 2 281 -31 2498 83 0 0 chr17 11669889 11670188 -77834365 - AluY SINE Alu -11 300 1 295 149 0 0 chr17 11670223 11670270 -77834283 + MER5A DNA MER1_type 67 113 -76 2350 81 13 7 chr17 11671897 11672195 -77832358 - AluSg1 SINE Alu -9 300 1 246 95 0 0 chr17 11673053 11673095 -77831458 + (T)n Simple_repeat Simple_repeat 1 42 0 585 259 44 60 chr17 11673568 11673819 -77830734 - LTR33A LTR ERVL -2 521 275 567 0 0 0 chr17 11673889 11673952 -77830601 + (CTG)n Simple_repeat Simple_repeat 1 63 0 221 297 16 78 chr17 11674159 11674287 -77830266 - L2 LINE L2 -3 3269 3150 387 0 0 0 chr17 11674304 11674347 -77830206 + (T)n Simple_repeat Simple_repeat 1 43 0 184 219 0 0 chr17 11674925 11674966 -77829587 + MIR SINE MIR 87 127 -81 182 264 207 11 chr17 11676052 11676108 -77828445 - MER5A DNA MER1_type -7 182 138 2234 118 0 0 chr17 11676108 11676404 -77828149 + AluSx SINE Alu 1 296 -16 182 264 207 11 chr17 11676404 11676434 -77828119 - MER5A DNA MER1_type -51 138 79 194 318 56 9 chr17 11676703 11676810 -77827743 - MIR3 SINE MIR -1 207 96 403 225 116 29 chr17 11677033 11677171 -77827382 - Charlie8 DNA MER1_type -2267 150 1 2283 110 7 0 chr17 11677314 11677613 -77826940 + AluSq SINE Alu 1 301 -12 2085 242 99 25 chr17 11677937 11678154 -77826399 - L1ME3A LINE L1 -9 6161 5961 309 26 0 0 chr17 11678154 11678192 -77826361 + (TG)n Simple_repeat Simple_repeat 1 38 0 2085 242 99 25 chr17 11678192 11678934 -77825619 - L1ME3A LINE L1 -209 5961 5030 533 263 166 0 chr17 11679039 11679256 -77825297 + MIR SINE MIR 10 262 0 208 231 0 0 chr17 11679285 11679324 -77825229 + polypurine Low_complexity Low_complexity 3 41 0 540 224 180 12 chr17 11679757 11679918 -77824635 - MER5A DNA MER1_type -1 188 1 1652 185 64 0 chr17 11679927 11680225 -77824328 + MER58B DNA MER1_type 2 318 -23 5488 143 33 11 chr17 11680495 11681398 -77823155 + MER49 LTR ERV1 1 923 0 248 170 0 0 chr17 11682147 11682194 -77822359 - MIR SINE MIR -65 143 97 783 286 122 20 chr17 11683028 11683420 -77821133 + MLT1K LTR MaLR 100 531 -57 907 133 12 75 chr17 11683512 11683685 -77820868 + FRAM SINE Alu 2 163 -13 926 279 30 70 chr17 11685174 11685600 -77818953 + MLT1I LTR MaLR 1 409 0 5585 145 7 29 chr17 11687566 11687826 -77816727 + MER49 LTR ERV1 2 266 -657 2438 53 0 0 chr17 11687826 11688150 -77816403 + AluY SINE Alu 1 324 0 5585 145 7 29 chr17 11688150 11688830 -77815723 + MER49 LTR ERV1 266 923 0 198 143 0 0 chr17 11688959 11688994 -77815559 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1755 274 101 21 chr17 11688999 11689572 -77814981 - L2 LINE L2 -7 3306 2780 2094 104 30 0 chr17 11689572 11689841 -77814712 + AluSc SINE Alu 1 277 -32 1755 274 101 21 chr17 11689841 11690498 -77814055 - L2 LINE L2 -533 2780 1969 610 328 112 14 chr17 11691297 11691593 -77812960 + L2 LINE L2 2471 2795 -519 267 340 83 33 chr17 11691601 11691842 -77812711 + L2 LINE L2 3001 3253 -60 469 235 44 37 chr17 11692646 11692782 -77811771 - MER5B DNA MER1_type -25 153 17 185 323 46 15 chr17 11692724 11692789 -77811764 + MER5A DNA MER1_type 114 180 -9 * 253 209 0 0 chr17 11692804 11692847 -77811706 - MIR SINE MIR -56 152 110 290 243 78 19 chr17 11692874 11692977 -77811576 - HAL1b LINE L1 -614 734 626 181 224 86 35 chr17 11693088 11693146 -77811407 + MER5A DNA MER1_type 13 73 -116 * 409 226 226 41 chr17 11693099 11693245 -77811308 - MER5A DNA MER1_type -8 181 9 321 296 114 50 chr17 11693388 11693608 -77810945 + MLT1K LTR MaLR 283 516 -72 988 246 104 74 chr17 11694153 11694547 -77810006 - MLT1F LTR MaLR 0 542 137 1496 199 7 28 chr17 11694738 11695020 -77809533 - AluJb SINE Alu -36 276 1 2165 100 0 21 chr17 11696242 11696564 -77807989 + AluSg SINE Alu 1 316 0 2158 93 0 0 chr17 11696681 11696949 -77807604 - AluSq SINE Alu -45 268 1 243 0 0 0 chr17 11697765 11697792 -77806761 + (TG)n Simple_repeat Simple_repeat 1 27 0 246 356 78 47 chr17 11698065 11698385 -77806168 + L2 LINE L2 2943 3272 0 488 191 95 0 chr17 11699086 11699191 -77805362 - L1MA10 LINE L1 -16 6318 6204 2343 113 0 0 chr17 11699360 11699669 -77804884 - AluSc SINE Alu 0 309 1 3944 105 11 2 chr17 11700628 11701170 -77803383 + L1PB2 LINE L1 5601 6147 -4 2277 122 3 0 chr17 11701184 11701496 -77803057 + AluSq SINE Alu 1 313 0 1986 159 83 28 chr17 11701680 11702077 -77802476 + MSTA LTR MaLR 1 419 -9 1679 239 97 42 chr17 11702086 11702613 -77801940 - MLT1G LTR MaLR -12 578 23 940 185 0 34 chr17 11702617 11702795 -77801758 - FRAM SINE Alu -5 171 1 203 402 68 0 chr17 11703107 11703224 -77801329 + L2 LINE L2 3140 3264 -8 261 359 0 0 chr17 11703345 11703448 -77801105 + L3 LINE CR1 1231 1333 -244 834 254 11 16 chr17 11703896 11704085 -77800468 + MER5A DNA MER1_type 2 189 0 563 207 71 64 chr17 11704376 11704516 -77800037 + FLAM_A SINE Alu 1 141 -1 553 246 7 25 chr17 11704783 11704926 -77799627 - MIR SINE MIR -62 146 29 23 68 0 0 chr17 11705480 11705524 -77799029 + AT_rich Low_complexity Low_complexity 1 44 0 468 306 30 8 chr17 11705537 11705671 -77798882 + MIR SINE MIR 9 145 -117 1834 243 94 11 chr17 11705674 11706248 -77798305 - MLT2F LTR ERVL -3 660 2 21 71 0 0 chr17 11706543 11706585 -77797968 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr17 11707350 11707372 -77797181 + AT_rich Low_complexity Low_complexity 1 22 0 883 282 24 12 chr17 11707623 11707878 -77796675 + MIR SINE MIR 2 259 -3 2890 7 0 0 chr17 11708879 11709188 -77795365 - AluYa5 SINE Alu -2 309 1 517 281 43 6 chr17 11709768 11709932 -77794621 + MIR SINE MIR 36 205 -57 321 305 26 26 chr17 11710836 11710990 -77793563 - MLT1I LTR MaLR -255 154 1 3540 157 21 116 chr17 11711119 11711337 -77793216 + L1MA10 LINE L1 5508 5745 -589 245 100 20 0 chr17 11711337 11711387 -77793166 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 3540 157 21 116 chr17 11711387 11712079 -77792474 + L1MA10 LINE L1 5745 6331 -3 2097 128 7 0 chr17 11712088 11712385 -77792168 + AluSq SINE Alu 1 299 -14 2139 120 3 0 chr17 11712386 11712678 -77791875 + AluSg SINE Alu 1 293 -17 5996 15 8 0 chr17 11712729 11713377 -77791176 + L1PA4 LINE L1 5503 6155 0 256 185 0 0 chr17 11713398 11713443 -77791110 + MIR SINE MIR 106 150 -58 570 312 94 40 chr17 11713668 11714330 -77790223 + L2 LINE L2 2608 3313 0 1830 152 14 7 chr17 11715028 11715325 -77789228 + AluJb SINE Alu 1 299 -13 2653 154 16 5 chr17 11715758 11716181 -77788372 - MSTA LTR MaLR 0 428 1 369 62 0 0 chr17 11716410 11716458 -77788095 + (TG)n Simple_repeat Simple_repeat 1 48 0 399 279 39 102 chr17 11716517 11716771 -77787782 - MLT1K LTR MaLR -3 585 348 3553 127 27 35 chr17 11717379 11717970 -77786583 - LTR60 LTR ERV1 0 586 1 4065 207 41 32 chr17 11718276 11719130 -77785423 - MER21B LTR ERV1 -1 862 1 3119 143 109 107 chr17 11719513 11720236 -77784317 + LTR8A LTR ERV1 1 725 -2 260 332 54 38 chr17 11720588 11720901 -77783652 - L1M4 LINE L1 -1315 4831 4514 426 307 91 24 chr17 11720976 11721263 -77783290 - L1M4 LINE L1 -1637 4509 4204 292 193 108 24 chr17 11721377 11721460 -77783093 - HAL1b LINE L1 -923 425 336 225 345 212 0 chr17 11721688 11721801 -77782752 + MIR SINE MIR 4 140 -122 1954 252 59 66 chr17 11721801 11722311 -77782242 + L1MB5 LINE L1 3813 4325 -1821 5287 47 0 0 chr17 11722311 11722902 -77781651 + LTR10C LTR ERV1 1 591 0 1954 252 59 66 chr17 11722902 11723188 -77781365 + L1MB5 LINE L1 4325 4612 -1534 2275 99 0 0 chr17 11723188 11723482 -77781071 + AluY SINE Alu 1 294 -17 1954 252 59 66 chr17 11723482 11724028 -77780525 + L1MB5 LINE L1 4612 5072 -1074 2254 206 57 66 chr17 11724028 11724587 -77779966 - MLT2B3 LTR ERVL 0 554 1 1954 252 59 66 chr17 11724587 11724780 -77779773 + L1MB5 LINE L1 5072 5265 -881 1059 146 34 96 chr17 11724781 11725020 -77779533 + L1MB5 LINE L1 5943 6166 -8 * 4683 154 52 19 chr17 11725018 11725894 -77778659 + L1MB5 LINE L1 5270 6174 0 361 224 52 17 chr17 11725896 11726012 -77778541 + MIR SINE MIR 143 262 0 842 263 157 23 chr17 11726435 11726948 -77777605 - MLT2E LTR ERVL 0 628 1 2120 126 3 0 chr17 11727057 11727350 -77777203 + AluSg SINE Alu 1 294 -16 1601 209 81 88 chr17 11727609 11728176 -77776377 - MLT1F1 LTR MaLR 0 567 1 2348 91 3 0 chr17 11728700 11728997 -77775556 - AluSc SINE Alu -11 298 1 1308 237 28 31 chr17 11729557 11729911 -77774642 - MLT1A1 LTR MaLR 0 365 13 256 269 147 58 chr17 11730100 11730256 -77774297 - HAL1b LINE L1 -463 885 716 2147 124 79 22 chr17 11730364 11730719 -77773834 - THE1C LTR MaLR 0 375 1 2311 101 0 21 chr17 11730766 11731003 -77773550 + MER47A DNA MER2_type 37 266 -2057 2426 171 18 37 chr17 11731003 11731437 -77773116 - MSTB LTR MaLR 0 426 1 2311 101 0 21 chr17 11731437 11731536 -77773017 + MER47A DNA MER2_type 266 366 0 382 209 9 48 chr17 11731591 11731696 -77772857 - HAL1b LINE L1 -867 481 381 1668 276 37 54 chr17 11731721 11731940 -77772613 + MLT1E LTR MaLR 7 228 -365 1180 103 43 16 chr17 11731940 11732124 -77772429 + MER53 DNA DNA 1 189 0 1668 276 37 54 chr17 11732124 11732501 -77772052 + MLT1E LTR MaLR 228 593 0 2060 107 3 55 chr17 11732700 11733010 -77771543 - AluSq SINE Alu -19 294 1 1988 140 0 7 chr17 11733822 11734115 -77770438 + AluSx SINE Alu 1 291 -21 303 28 0 0 chr17 11734122 11734158 -77770395 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 2380 61 7 0 chr17 11734616 11734735 -77769818 + AluY SINE Alu 1 118 -193 549 0 0 0 chr17 11734735 11734796 -77769757 + (CA)n Simple_repeat Simple_repeat 2 62 0 2380 61 7 0 chr17 11734796 11734972 -77769581 + AluY SINE Alu 118 298 -13 728 367 38 10 chr17 11734981 11735373 -77769180 + MERVL LTR ERVL 728 1130 -3866 336 266 64 104 chr17 11735362 11735475 -77769078 + MERVL LTR ERVL 1246 1362 -4402 * 2610 149 26 33 chr17 11735475 11735676 -77768877 + MSTB LTR MaLR 1 202 -224 2080 94 42 3 chr17 11735676 11735963 -77768590 + AluSg SINE Alu 1 298 -12 2610 149 26 33 chr17 11735963 11736190 -77768363 + MSTB LTR MaLR 202 426 0 336 266 64 104 chr17 11736190 11736422 -77768131 + MERVL LTR ERVL 1362 1577 -4187 1319 335 36 42 chr17 11736476 11737329 -77767224 + MERVL LTR ERVL 1570 2417 -2579 1872 175 66 95 chr17 11737330 11737771 -77766782 - MSTC LTR MaLR 0 428 1 4093 250 97 48 chr17 11737777 11739358 -77765195 - MSTC-int LTR MaLR -5 1730 2 2271 194 21 39 chr17 11739362 11739796 -77764757 - MSTC LTR MaLR -2 426 1 755 329 62 23 chr17 11739816 11740248 -77764305 + MERVL LTR ERVL 2471 2919 -2845 570 289 14 0 chr17 11740279 11740421 -77764132 + MER5A DNA MER1_type 36 179 -10 898 313 81 47 chr17 11740422 11740790 -77763763 + MERVL LTR ERVL 3097 3451 -1954 1868 210 20 83 chr17 11740790 11740895 -77763658 - MLT1D LTR MaLR 0 505 395 2021 60 24 0 chr17 11740895 11741145 -77763408 + AluY SINE Alu 39 294 -17 1868 210 20 83 chr17 11741145 11741578 -77762975 - MLT1D LTR MaLR -110 395 1 898 313 81 47 chr17 11741578 11741708 -77762845 + MERVL LTR ERVL 3451 3575 -1830 2261 171 0 11 chr17 11741708 11742077 -77762476 - MLT1A1 LTR MaLR 0 365 1 898 313 81 47 chr17 11742077 11742991 -77761562 + MERVL LTR ERVL 3575 4527 -878 773 301 69 45 chr17 11743126 11743574 -77760979 + MERVL LTR ERVL 4779 5237 -527 1063 277 41 0 chr17 11743935 11744227 -77760326 + LTR16C LTR ERVL 186 489 -2 246 32 0 0 chr17 11744895 11744926 -77759627 + (TG)n Simple_repeat Simple_repeat 2 32 0 294 315 55 20 chr17 11745100 11745246 -77759307 - HERV16 LTR ERVL -4483 513 363 4555 25 4 2 chr17 11745347 11745873 -77758680 - L1PA4 LINE L1 -3 6152 5626 7421 26 9 0 chr17 11745874 11746975 -77757578 + L1PA4 LINE L1 4521 5628 -527 341 261 125 88 chr17 11747344 11747489 -77757064 - L1ME LINE L1 -326 5795 5657 2115 156 55 8 chr17 11747489 11747631 -77756922 - L1MA10 LINE L1 -18 6316 6182 345 47 0 0 chr17 11747631 11747674 -77756879 + (TG)n Simple_repeat Simple_repeat 2 44 0 2115 156 55 8 chr17 11747674 11747916 -77756637 - L1MA10 LINE L1 -152 6182 5914 341 261 125 88 chr17 11747916 11748065 -77756488 - L1ME LINE L1 -464 5657 5490 609 294 124 40 chr17 11748083 11748633 -77755920 - L2 LINE L2 -1014 2300 1705 1901 156 71 3 chr17 11748816 11749155 -77755398 - MLT1A1 LTR MaLR 0 365 4 221 186 0 0 chr17 11749456 11749499 -77755054 - L2 LINE L2 0 3313 3271 3332 173 29 3 chr17 11749574 11750164 -77754389 + MER6A DNA MER2_type 1 605 0 1879 89 3 3 chr17 11750327 11750617 -77753936 - THE1B LTR MaLR 0 364 1 241 245 0 88 chr17 11751068 11751170 -77753383 + C-rich Low_complexity Low_complexity 2 94 0 212 287 163 16 chr17 11753281 11753410 -77751143 - MIR3 SINE MIR -14 194 47 1119 166 106 119 chr17 11753988 11754160 -77750393 - MLT1A2 LTR MaLR 0 374 201 2102 96 51 17 chr17 11754160 11754453 -77750100 - AluSc SINE Alu -6 303 1 1119 166 106 119 chr17 11754453 11754659 -77749894 - MLT1A2 LTR MaLR -173 201 1 564 114 0 0 chr17 11754866 11754945 -77749608 - MER72 LTR ERV1 0 722 644 1312 120 0 6 chr17 11754945 11755120 -77749433 + AluSx SINE Alu 1 174 -138 1249 103 0 6 chr17 11755120 11755295 -77749258 + AluSg/x SINE Alu 122 295 -17 235 275 84 15 chr17 11755303 11755434 -77749119 + L1M4 LINE L1 3662 3801 -2345 1985 179 53 16 chr17 11755574 11755948 -77748605 + MLT1C LTR MaLR 80 467 0 582 284 77 72 chr17 11756693 11757511 -77747042 + HAL1 LINE L1 881 1705 -802 1661 207 24 0 chr17 11757511 11757845 -77746708 + MER2 DNA MER2_type 2 343 -1 582 284 77 72 chr17 11757845 11757883 -77746670 + HAL1 LINE L1 1705 1741 -766 960 214 0 5 chr17 11757884 11758071 -77746482 - MLT2C1 LTR ERVL -211 186 1 490 239 83 22 chr17 11758328 11758508 -77746045 + L1MC4 LINE L1 5722 5912 -1896 260 222 89 22 chr17 11758536 11758626 -77745927 + L1MC4 LINE L1 6608 6703 -1339 227 119 0 0 chr17 11758630 11758672 -77745881 - LTR66 LTR ERVL -171 439 398 2608 42 0 0 chr17 11759175 11759483 -77745070 - L1PA4 LINE L1 -3 6152 5845 1230 45 7 0 chr17 11759483 11759637 -77744916 + L1P LINE L1 4942 5096 -1050 180 278 165 0 chr17 11759704 11759819 -77744734 + MIR SINE MIR 111 244 -18 230 270 11 34 chr17 11759916 11760005 -77744548 - MIR SINE MIR -90 118 32 932 213 0 0 chr17 11760492 11760656 -77743897 - FRAM SINE Alu -17 159 1 335 263 13 77 chr17 11761576 11761732 -77742821 - MIR SINE MIR 0 262 117 2130 261 7 22 chr17 11761764 11762307 -77742246 - MLT1F LTR MaLR 0 542 8 190 229 0 21 chr17 11762452 11762500 -77742053 - MIR SINE MIR -6 256 210 388 311 84 59 chr17 11763304 11763402 -77741151 - LTR16C LTR ERVL -105 386 292 1752 141 198 41 chr17 11763402 11763771 -77740782 + MSTA LTR MaLR 2 428 0 388 311 84 59 chr17 11763771 11763958 -77740595 - LTR16C LTR ERVL -199 292 94 296 249 11 133 chr17 11764135 11764316 -77740237 - MLT1J LTR MaLR -347 164 6 2488 154 51 10 chr17 11765946 11766356 -77738197 - MSTA LTR MaLR 0 428 2 1094 157 65 55 chr17 11766419 11766636 -77737917 + MER20 DNA MER1_type 1 219 0 213 311 113 9 chr17 11767273 11767379 -77737174 - MIR SINE MIR -74 188 72 2343 66 0 7 chr17 11767413 11767701 -77736852 + AluY SINE Alu 3 288 -23 216 0 0 0 chr17 11767704 11767728 -77736825 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1647 219 64 26 chr17 11767767 11768219 -77736334 + LTR55 LTR ERV 80 548 0 2484 53 0 0 chr17 11768465 11768774 -77735779 - AluY SINE Alu 0 309 1 22 0 0 0 chr17 11768782 11768804 -77735749 + AT_rich Low_complexity Low_complexity 1 22 0 541 244 83 65 chr17 11769900 11770117 -77734436 - MIR SINE MIR -22 240 20 597 212 8 0 chr17 11770350 11770468 -77734085 - FLAM_A SINE Alu -13 120 2 1064 62 0 0 chr17 11770527 11770655 -77733898 - AluSg/x SINE Alu -7 303 176 212 275 28 92 chr17 11770824 11770882 -77733671 + MER5A DNA MER1_type 20 70 -119 2080 119 0 3 chr17 11770882 11771187 -77733366 + AluY SINE Alu 1 304 0 212 275 28 92 chr17 11771187 11771236 -77733317 + MER5A DNA MER1_type 70 121 -68 2335 91 3 3 chr17 11771600 11771898 -77732655 + AluSq SINE Alu 1 298 -15 395 141 0 0 chr17 11773222 11773286 -77731267 + LTR33A LTR ERVL 414 477 -46 2271 97 0 3 chr17 11773350 11773639 -77730914 + AluSx SINE Alu 1 288 -24 525 228 170 6 chr17 11773674 11773845 -77730708 - MIR SINE MIR -50 212 14 577 251 56 17 chr17 11773935 11774114 -77730439 + MER5A DNA MER1_type 4 189 0 1723 212 88 51 chr17 11774308 11774381 -77730172 + MLT1D LTR MaLR 1 70 -435 2093 107 3 13 chr17 11774381 11774680 -77729873 - AluSg SINE Alu -14 296 1 1723 212 88 51 chr17 11774680 11775092 -77729461 + MLT1D LTR MaLR 70 504 -1 647 349 121 32 chr17 11775244 11776340 -77728213 + L2 LINE L2 252 1478 -1836 2589 68 0 0 chr17 11776340 11776647 -77727906 - AluY SINE Alu -4 307 1 647 349 121 32 chr17 11776647 11776825 -77727728 + L2 LINE L2 1478 1639 -1675 1090 275 104 21 chr17 11776828 11777396 -77727157 + L1M4 LINE L1 2997 3611 -2535 858 228 147 45 chr17 11777381 11777693 -77726860 + L1ME2 LINE L1 5806 6149 -15 * 319 196 54 62 chr17 11777697 11777809 -77726744 + L1MC5 LINE L1 7773 7883 -78 231 278 62 0 chr17 11777998 11778095 -77726458 - L1ME LINE L1 -210 5911 5809 1805 77 20 156 chr17 11778531 11778883 -77725670 - AluYb8 SINE Alu -10 308 5 326 303 27 24 chr17 11778976 11779133 -77725420 + MIR SINE MIR 33 185 -58 636 276 168 14 chr17 11779143 11779354 -77725199 - L2 LINE L2 -2 3311 3134 225 94 0 0 chr17 11779354 11779386 -77725167 + (TG)n Simple_repeat Simple_repeat 2 33 0 636 276 168 14 chr17 11779386 11779782 -77724771 - L2 LINE L2 -179 3134 2616 234 247 0 104 chr17 11779772 11779849 -77724704 + MIR SINE MIR 191 259 -3 * 1321 240 96 22 chr17 11779973 11780526 -77724027 + MLT2F LTR ERVL 1 663 0 2508 69 3 3 chr17 11780572 11780876 -77723677 + AluSg SINE Alu 1 304 -6 196 283 19 0 chr17 11780947 11781000 -77723553 + L2 LINE L2 3219 3272 0 2905 140 18 8 chr17 11781019 11781526 -77723027 + L1MA7 LINE L1 5773 6284 -7 478 228 0 0 chr17 11781609 11781701 -77722852 - MLT2F LTR ERVL -555 108 17 330 303 174 0 chr17 11782451 11782583 -77721970 + MLT1L LTR MaLR 311 465 -150 1406 18 18 0 chr17 11782589 11782757 -77721796 - L1PA4 LINE L1 0 6155 5985 808 22 0 0 chr17 11782757 11782849 -77721704 + L1PA5 LINE L1 5849 5940 -214 381 266 56 14 chr17 11782849 11782992 -77721561 + MLT1L LTR MaLR 465 613 -2 21 0 0 0 chr17 11783651 11783672 -77720881 + AT_rich Low_complexity Low_complexity 1 21 0 256 217 98 22 chr17 11783683 11783775 -77720778 - L1MC4 LINE L1 -16 8026 7928 21 0 0 0 chr17 11783780 11783801 -77720752 + AT_rich Low_complexity Low_complexity 1 21 0 1448 196 50 0 chr17 11784584 11784865 -77719688 + AluJo SINE Alu 16 310 -2 450 271 8 42 chr17 11785407 11785525 -77719028 - MER81 DNA DNA 0 114 1 409 240 182 0 chr17 11787434 11787588 -77716965 + MER5A DNA MER1_type 7 188 -1 2582 49 3 3 chr17 11787708 11788016 -77716537 + AluY SINE Alu 1 308 -3 1956 88 3 100 chr17 11788193 11788538 -77716015 - AluSx SINE Alu 0 314 1 1341 205 94 7 chr17 11788668 11788966 -77715587 + MLT1A1 LTR MaLR 1 324 -41 3010 69 13 2 chr17 11788968 11789361 -77715192 + L1PA8 LINE L1 5766 6162 -10 32 33 0 33 chr17 11789364 11789399 -77715154 + AT_rich Low_complexity Low_complexity 1 35 -24 2305 127 0 0 chr17 11789399 11789707 -77714846 + AluSg SINE Alu 1 308 -2 32 33 0 33 chr17 11789707 11789732 -77714821 + AT_rich Low_complexity Low_complexity 35 59 0 348 167 0 0 chr17 11789732 11789786 -77714767 + MLT1A1 LTR MaLR 312 365 0 431 302 54 15 chr17 11789971 11790176 -77714377 - HAL1b LINE L1 -843 505 293 2387 73 0 0 chr17 11790332 11790619 -77713934 - AluY SINE Alu -24 287 1 243 0 0 0 chr17 11790879 11790906 -77713647 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1639 166 0 42 chr17 11790908 11791215 -77713338 - AluJb SINE Alu -8 304 11 253 0 0 0 chr17 11792329 11792357 -77712196 + (TTTTC)n Simple_repeat Simple_repeat 3 180 0 2418 93 0 0 chr17 11792357 11792667 -77711886 - AluSg SINE Alu 0 310 1 271 247 353 0 chr17 11792756 11792906 -77711647 + LTR50 LTR ERVL 12 214 -581 2210 47 4 25 chr17 11792907 11793183 -77711370 - AluY SINE Alu -10 301 32 896 222 129 73 chr17 11793223 11793664 -77710889 + LTR50 LTR ERVL 330 795 0 341 304 27 93 chr17 11793699 11793956 -77710597 - L2 LINE L2 -115 3157 2918 2411 68 7 0 chr17 11794143 11794436 -77710117 + AluSc SINE Alu 1 295 -14 339 313 114 0 chr17 11794459 11794590 -77709963 - L2 LINE L2 -547 2767 2622 1692 194 0 3 chr17 11794764 11795047 -77709506 - AluJo SINE Alu -30 282 1 1747 163 4 7 chr17 11795076 11795353 -77709200 + AluJo SINE Alu 5 280 -32 2173 105 10 3 chr17 11795849 11796144 -77708409 - AluSq SINE Alu -16 297 1 728 301 66 38 chr17 11796145 11796464 -77708089 + MLT1J2 LTR MaLR 120 447 -3 5040 157 8 22 chr17 11796558 11797363 -77707190 + MER54B LTR ERVL 1 793 0 2457 71 3 3 chr17 11797364 11797675 -77706878 + AluY SINE Alu 1 311 0 26 0 0 0 chr17 11797930 11797956 -77706597 + AT_rich Low_complexity Low_complexity 1 26 0 2000 119 0 41 chr17 11798130 11798266 -77706287 + AluSx SINE Alu 1 141 -182 2218 112 3 0 chr17 11798266 11798561 -77705992 + AluSx SINE Alu 1 296 -16 2000 119 0 41 chr17 11798561 11798759 -77705794 + AluSx SINE Alu 141 323 0 452 165 11 0 chr17 11798780 11798871 -77705682 + (TA)n Simple_repeat Simple_repeat 2 93 0 2727 138 10 0 chr17 11799541 11799940 -77704613 - MER57A LTR ERV1 0 403 1 795 302 106 22 chr17 11800528 11800979 -77703574 - LTR33 LTR ERVL -8 513 25 315 343 53 58 chr17 11801692 11802028 -77702525 + L2 LINE L2 2520 2855 -459 188 35 35 0 chr17 11802028 11802057 -77702496 + (CA)n Simple_repeat Simple_repeat 2 31 0 315 343 53 58 chr17 11802057 11802152 -77702401 + L2 LINE L2 2855 2949 -365 1976 140 3 0 chr17 11802706 11802992 -77701561 - AluSx SINE Alu -25 287 1 1257 306 135 34 chr17 11803045 11804014 -77700539 - L2 LINE L2 -49 3264 2169 2305 58 0 64 chr17 11804014 11804326 -77700227 + AluY SINE Alu 5 296 -15 1257 306 135 34 chr17 11804326 11804533 -77700020 - L2 LINE L2 -1144 2169 1984 1999 146 3 7 chr17 11804549 11804851 -77699702 + AluJb SINE Alu 1 301 -11 1225 73 17 0 chr17 11804877 11805054 -77699499 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 222 37 0 0 chr17 11805066 11805093 -77699460 + (GGAA)n Simple_repeat Simple_repeat 2 28 0 4178 141 14 50 chr17 11805106 11805453 -77699100 + L1MB3 LINE L1 5450 5808 -375 4350 190 38 49 chr17 11805453 11806323 -77698230 - MER21B LTR ERV1 -1 862 3 4178 141 14 50 chr17 11806323 11806496 -77698057 + L1MB3 LINE L1 5808 5986 -197 2016 170 18 42 chr17 11806496 11806896 -77697657 - MLT1B LTR MaLR 0 390 1 4178 141 14 50 chr17 11806896 11807132 -77697421 + L1MB3 LINE L1 5986 6180 -3 3671 211 54 6 chr17 11807137 11808360 -77696193 + L1MB7 LINE L1 4896 6175 -9 2205 141 144 5 chr17 11808507 11808882 -77695671 - MSTA LTR MaLR 0 428 2 5418 146 30 42 chr17 11809046 11809180 -77695373 - L1MA4 LINE L1 -3 6297 6163 569 98 0 24 chr17 11809180 11809262 -77695291 - MADE1 DNA Mariner 0 80 1 5418 146 30 42 chr17 11809262 11809615 -77694938 - L1MA4 LINE L1 -137 6163 5807 1758 90 0 9 chr17 11809615 11809848 -77694705 - AluSc SINE Alu 0 309 79 5418 146 30 42 chr17 11809848 11810415 -77694138 - L1MA4 LINE L1 -493 5807 5254 241 163 23 47 chr17 11810459 11810545 -77694008 + (TA)n Simple_repeat Simple_repeat 2 85 0 193 128 43 0 chr17 11810574 11810621 -77693932 + (TA)n Simple_repeat Simple_repeat 1 49 0 198 143 0 0 chr17 11810954 11810989 -77693564 + (T)n Simple_repeat Simple_repeat 1 35 0 2347 97 0 0 chr17 11810996 11811305 -77693248 - AluSg SINE Alu -1 309 1 2150 88 10 17 chr17 11811562 11811889 -77692664 + AluY SINE Alu 1 311 0 535 204 47 29 chr17 11813435 11813607 -77690946 - MER104 DNA MER2_type -3 177 3 568 302 21 21 chr17 11813830 11814019 -77690534 + MER5A DNA MER1_type 1 189 0 643 217 64 35 chr17 11814137 11814340 -77690213 + MLT1J2 LTR MaLR 1 209 -241 1959 190 32 0 chr17 11814512 11814860 -77689693 - MLT1A1 LTR MaLR -1 364 6 465 305 71 66 chr17 11816405 11816812 -77687741 + HAL1 LINE L1 161 569 -1938 870 248 87 63 chr17 11816878 11817371 -77687182 + HAL1 LINE L1 680 1184 -1323 328 278 98 46 chr17 11817375 11817569 -77686984 + HAL1 LINE L1 1237 1440 -1067 2347 177 135 9 chr17 11817575 11818026 -77686527 + MLT2B2 LTR ERVL 8 515 0 1180 236 108 87 chr17 11818052 11818743 -77685810 + HAL1 LINE L1 1458 2163 -344 302 317 90 18 chr17 11818933 11819016 -77685537 + MLT1J LTR MaLR 227 303 -208 315 71 0 0 chr17 11819016 11819058 -77685495 + (CA)n Simple_repeat Simple_repeat 2 43 0 302 317 90 18 chr17 11819058 11819141 -77685412 + MLT1J LTR MaLR 303 405 -106 236 302 135 32 chr17 11819201 11819453 -77685100 + HAL1 LINE L1 2147 2424 -83 1743 204 20 14 chr17 11819475 11819832 -77684721 - MLT1A2 LTR MaLR 0 374 16 2326 112 0 0 chr17 11819892 11820196 -77684357 - AluSx SINE Alu -6 306 3 217 254 0 0 chr17 11820363 11820418 -77684135 + T-rich Low_complexity Low_complexity 1 55 0 421 362 30 25 chr17 11820671 11820870 -77683683 - L2 LINE L2 -203 3069 2870 309 102 20 0 chr17 11820883 11820932 -77683621 - MADE1 DNA Mariner 0 80 31 2190 178 67 13 chr17 11821660 11822126 -77682427 - L1MCa LINE L1 -5158 1268 778 1041 193 33 20 chr17 11822127 11822371 -77682182 - L1MCa LINE L1 -6168 258 12 288 271 131 25 chr17 11822545 11822667 -77681886 - MIR3 SINE MIR -34 174 40 518 238 0 0 chr17 11823336 11823441 -77681112 - MER69A DNA AcHobo -13 164 60 851 281 34 43 chr17 11823572 11823921 -77680632 - MARNA DNA Mariner -100 486 141 792 282 61 43 chr17 11823951 11824394 -77680159 + LTR16B LTR ERVL 3 453 -11 1823 218 34 22 chr17 11824460 11824873 -77679680 + LTR52 LTR ERVL 1 418 -3 1724 160 22 116 chr17 11824915 11825328 -77679225 - MLT1A2 LTR MaLR 0 374 1 22 0 0 0 chr17 11826531 11826553 -77678000 + AT_rich Low_complexity Low_complexity 1 22 0 2310 82 3 3 chr17 11826558 11826863 -77677690 + AluSq SINE Alu 1 305 -8 201 260 0 55 chr17 11828369 11828442 -77676111 + L2 LINE L2 2997 3065 -207 1457 137 18 0 chr17 11828836 11829062 -77675491 - LTR12 LTR ERV1 0 714 485 4038 144 53 40 chr17 11829066 11829744 -77674809 - LTR12 LTR ERV1 -1 687 1 182 309 15 29 chr17 11829995 11830063 -77674490 + L2 LINE L2 3241 3307 -6 874 249 57 10 chr17 11830088 11830297 -77674256 - MER20 DNA MER1_type 0 219 1 358 264 21 42 chr17 11831688 11831832 -77672721 + LTR67 LTR ERVL 407 547 -10 201 39 0 0 chr17 11831848 11831874 -77672679 + (CA)n Simple_repeat Simple_repeat 2 27 0 196 170 38 0 chr17 11832189 11832242 -77672311 + (TA)n Simple_repeat Simple_repeat 2 56 0 2181 117 7 0 chr17 11832520 11832818 -77671735 - AluSq SINE Alu -13 300 1 325 303 53 5 chr17 11833208 11833396 -77671157 + L1ME3A LINE L1 981 1177 -5028 2045 138 0 6 chr17 11833667 11833978 -77670575 + AluSx SINE Alu 1 309 -3 2306 97 0 10 chr17 11834288 11834587 -77669966 - AluSc SINE Alu -9 300 5 329 244 30 92 chr17 11834657 11834821 -77669732 + LTR16B LTR ERVL 311 464 0 * 585 288 70 41 chr17 11834821 11835047 -77669506 - MLT1I LTR MaLR -165 244 12 337 308 81 29 chr17 11835057 11835375 -77669178 + L1M2 LINE L1 1512 1912 -4304 1585 161 0 0 chr17 11835389 11835631 -77668922 - Tigger2a DNA MER2_type 0 434 193 1543 201 81 0 chr17 11835631 11835915 -77668638 + 7SLRNA srpRNA srpRNA 1 307 -13 2457 91 0 0 chr17 11835924 11836233 -77668320 + AluY SINE Alu 1 309 -2 1268 144 0 42 chr17 11836295 11836510 -77668043 - Tigger2a DNA MER2_type -228 206 1 24 0 0 0 chr17 11836537 11836561 -77667992 + AT_rich Low_complexity Low_complexity 1 24 0 898 207 131 125 chr17 11836758 11837047 -77667506 + L1ME3A LINE L1 2149 2409 -3806 2179 157 64 43 chr17 11837047 11837227 -77667326 + MSTB1 LTR MaLR 4 179 -253 2268 117 0 0 chr17 11837227 11837535 -77667018 - AluSg SINE Alu -2 308 1 2179 157 64 43 chr17 11837535 11837774 -77666779 + MSTB1 LTR MaLR 179 432 0 898 207 131 125 chr17 11837774 11838005 -77666548 + L1ME3A LINE L1 2409 2637 -3578 1653 188 3 7 chr17 11838006 11838309 -77666244 - AluJb SINE Alu -8 304 3 180 111 0 0 chr17 11838322 11838349 -77666204 + (TC)n Simple_repeat Simple_repeat 1 27 0 864 248 37 17 chr17 11838392 11838799 -77665754 + L1ME3A LINE L1 5191 5605 -626 1458 252 26 26 chr17 11838844 11839268 -77665285 + L1ME3A LINE L1 5597 6020 -219 2302 161 51 5 chr17 11839401 11839496 -77665057 + MSTA LTR MaLR 19 108 -320 4320 109 11 88 chr17 11839496 11840193 -77664360 + LTR9B LTR ERV1 1 644 0 2302 161 51 5 chr17 11840193 11840489 -77664064 + MSTA LTR MaLR 108 428 0 826 118 15 7 chr17 11840489 11840624 -77663929 + MSTA-int LTR MaLR 1 136 -1515 369 197 162 17 chr17 11840678 11840795 -77663758 - MIR3 SINE MIR -71 137 4 3721 141 26 38 chr17 11840800 11841462 -77663091 + L1MC1 LINE L1 5678 6331 -2 616 128 0 0 chr17 11841528 11841614 -77662939 + L1PA8 LINE L1 11 96 -6365 * 10633 142 6 12 chr17 11841602 11844259 -77660294 + L1PA8 LINE L1 521 3160 -3301 12557 97 1 17 chr17 11844259 11844278 -77660275 + L1PA8 LINE L1 3992 4010 -2477 540 0 0 0 chr17 11844278 11844338 -77660215 + (TA)n Simple_repeat Simple_repeat 2 61 0 12557 97 1 17 chr17 11844338 11846819 -77657734 + L1PA8 LINE L1 4010 6485 -2 198 71 0 0 chr17 11847126 11847154 -77657399 + (A)n Simple_repeat Simple_repeat 1 28 0 625 287 45 0 chr17 11847261 11847463 -77657090 - MIR SINE MIR -6 256 46 1272 85 0 0 chr17 11847928 11848092 -77656461 - AluY SINE Alu -16 295 132 2157 229 96 10 chr17 11849434 11850027 -77654526 + LTR48B LTR ERV1 1 644 0 2531 58 0 3 chr17 11850418 11850730 -77653823 + AluY SINE Alu 1 311 0 2164 84 6 40 chr17 11850839 11851161 -77653392 + AluY SINE Alu 1 311 0 334 305 107 19 chr17 11851166 11851428 -77653125 - L1ME4a LINE L1 -71 6050 5766 236 309 15 0 chr17 11851667 11851735 -77652818 + L2 LINE L2 3187 3255 -17 277 200 12 50 chr17 11851764 11851844 -77652709 - LTR67 LTR ERVL 0 557 481 1211 224 0 73 chr17 11851845 11851909 -77652644 + L1ME2 LINE L1 5599 5666 -498 2258 101 3 0 chr17 11851909 11852205 -77652348 + AluSc SINE Alu 1 297 -12 1211 224 0 73 chr17 11852205 11852470 -77652083 + L1ME2 LINE L1 5666 5904 -260 2338 77 0 0 chr17 11853292 11853579 -77650974 + AluY SINE Alu 24 310 -1 374 344 47 27 chr17 11854172 11854428 -77650125 + MIR SINE MIR 2 262 0 4076 79 2 2 chr17 11854968 11855497 -77649056 - MER41A LTR ERV1 -25 529 1 226 343 29 29 chr17 11857279 11857416 -77647137 - MIR SINE MIR -56 152 16 317 320 20 0 chr17 11857601 11857701 -77646852 + L2 LINE L2 3198 3299 -14 209 321 112 98 chr17 11858245 11858316 -77646237 - L2 LINE L2 -2 3270 3201 2279 112 0 0 chr17 11858316 11858612 -77645941 + AluSx SINE Alu 1 296 -16 209 321 112 98 chr17 11858612 11858836 -77645717 - L2 LINE L2 -71 3201 2971 508 283 26 125 chr17 11858878 11859443 -77645110 + L2 LINE L2 2760 3274 -39 1467 176 68 102 chr17 11859443 11859492 -77645061 - MSTC LTR MaLR 0 428 379 2368 66 0 23 chr17 11859492 11859796 -77644757 - AluY SINE Alu -14 297 1 1467 176 68 102 chr17 11859796 11860189 -77644364 - MSTC LTR MaLR -49 379 1 508 283 26 125 chr17 11860189 11860226 -77644327 + L2 LINE L2 3274 3313 0 715 267 20 0 chr17 11861122 11861317 -77643236 - MIR SINE MIR 0 262 64 2290 84 0 7 chr17 11861389 11861707 -77642846 - AluY SINE Alu 0 311 3 1303 79 0 0 chr17 11861846 11862010 -77642543 - L1PA5 LINE L1 -255 5899 5736 1313 54 6 18 chr17 11862010 11862172 -77642381 + L1PA5 LINE L1 5988 6152 -2 548 176 20 0 chr17 11863684 11863786 -77640767 + AluSp/q SINE Alu 209 312 -1 579 134 10 62 chr17 11863962 11864059 -77640494 + FRAM SINE Alu 23 114 -62 392 332 131 5 chr17 11864256 11864470 -77640083 - MIR SINE MIR -3 259 19 752 285 55 40 chr17 11864607 11865010 -77639543 + MER113 DNA MER1_type? 70 478 -43 668 303 34 0 chr17 11865630 11865838 -77638715 - MIR SINE MIR -17 245 31 203 318 0 30 chr17 11866017 11866083 -77638470 + L2 LINE L2 3188 3251 -21 239 314 66 71 chr17 11866101 11866313 -77638240 + MIR SINE MIR 1 217 -45 2494 235 84 15 chr17 11866349 11866816 -77637737 + L1ME3A LINE L1 5324 5891 -271 2332 54 7 0 chr17 11866816 11867118 -77637435 + AluY SINE Alu 1 304 0 2494 235 84 15 chr17 11867118 11867409 -77637144 + L1ME3A LINE L1 5891 6160 -2 2506 52 3 7 chr17 11867645 11867952 -77636601 - AluY SINE Alu -5 306 1 2052 103 14 17 chr17 11868187 11868479 -77636074 + AluSx SINE Alu 22 312 0 347 217 88 35 chr17 11868907 11869083 -77635470 + L1MB1 LINE L1 5255 5445 -721 2720 164 17 29 chr17 11869097 11869122 -77635431 + L1MB1 LINE L1 5619 5643 -525 2026 119 3 7 chr17 11869122 11869442 -77635111 - AluSq SINE Alu 0 319 1 2720 164 17 29 chr17 11869442 11869631 -77634922 + L1MB1 LINE L1 5643 5833 -335 2394 86 0 0 chr17 11869631 11869922 -77634631 + AluSc SINE Alu 2 292 -17 2720 164 17 29 chr17 11869922 11870223 -77634330 + L1MB1 LINE L1 5833 6130 -38 1157 60 0 0 chr17 11870223 11870357 -77634196 + AluSg SINE Alu 1 134 -176 2319 55 3 45 chr17 11870357 11870666 -77633887 + AluY SINE Alu 1 296 -15 858 153 45 86 chr17 11870667 11870889 -77633664 + L1MA10 LINE L1 6120 6332 -2 2203 125 0 6 chr17 11871257 11871569 -77632984 + AluSg SINE Alu 1 310 0 305 277 107 10 chr17 11871783 11871989 -77632564 + L1ME4a LINE L1 5894 6119 -2 270 130 0 19 chr17 11872075 11872129 -77632424 + L1ME4a LINE L1 6067 6119 -2 * 312 291 73 24 chr17 11872122 11872287 -77632266 + L1ME4a LINE L1 5878 6050 -71 268 253 22 22 chr17 11873152 11873243 -77631310 + L1ME4a LINE L1 5964 6054 -67 277 294 28 0 chr17 11874282 11874391 -77630162 + MER103 DNA DNA 8 119 -47 333 287 73 22 chr17 11874921 11875057 -77629496 - MIR3 SINE MIR -17 191 49 2709 215 21 66 chr17 11875199 11875907 -77628646 + LTR8 LTR ERV1 16 691 0 336 24 0 0 chr17 11876011 11876052 -77628501 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 339 246 0 0 chr17 11876052 11876113 -77628440 - L2 LINE L2 -19 3253 3193 4619 67 0 21 chr17 11876926 11877492 -77627061 + MER41A LTR ERV1 1 554 0 184 133 0 0 chr17 11877551 11877581 -77626972 + L2 LINE L2 3266 3295 -18 388 276 119 35 chr17 11877602 11877763 -77626790 + MIR3 SINE MIR 44 206 -2 459 304 43 0 chr17 11878391 11878552 -77626001 + MIR3 SINE MIR 41 208 0 1792 119 23 8 chr17 11879291 11879551 -77625002 - AluSx SINE Alu -14 298 35 2615 55 0 0 chr17 11880044 11880351 -77624202 - AluY SINE Alu -4 307 1 224 323 101 30 chr17 11880804 11880903 -77623650 - MER5A DNA MER1_type -23 166 61 993 244 88 75 chr17 11880946 11881344 -77623209 + MLT1G LTR MaLR 7 409 -186 401 213 105 133 chr17 11881460 11881746 -77622807 - L2 LINE L2 -1 3312 3035 554 206 0 0 chr17 11881754 11881861 -77622692 - MLT1C LTR MaLR 0 467 361 720 128 0 20 chr17 11881861 11881963 -77622590 + AluSx SINE Alu 2 101 -211 1601 84 0 24 chr17 11882204 11882417 -77622136 + AluSx SINE Alu 87 294 -18 1637 187 81 9 chr17 11882417 11882764 -77621789 - MLT1C LTR MaLR -95 372 1 188 307 67 105 chr17 11882957 11883299 -77621254 + L2 LINE L2 2481 2809 -505 216 0 0 0 chr17 11883465 11883489 -77621064 + (A)n Simple_repeat Simple_repeat 1 24 0 226 316 26 13 chr17 11883638 11883714 -77620839 + L2 LINE L2 3221 3297 -16 1017 263 36 65 chr17 11883848 11884391 -77620162 - MER50 LTR ERV1 -157 577 1 243 125 0 0 chr17 11884909 11884949 -77619604 + (T)n Simple_repeat Simple_repeat 1 40 0 2408 74 0 0 chr17 11885618 11885914 -77618639 - AluY SINE Alu -15 296 1 180 0 0 0 chr17 11885993 11886013 -77618540 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2904 99 0 0 chr17 11886366 11886729 -77617824 - THE1B LTR MaLR 0 364 2 689 172 26 0 chr17 11886985 11887101 -77617452 - LTR12 LTR ERV1 -234 480 362 251 265 0 0 chr17 11887105 11887173 -77617380 - LTR30 LTR ERV1 -99 623 556 1407 102 7 136 chr17 11887173 11887523 -77617030 - LTR12 LTR ERV1 -425 289 53 271 211 0 0 chr17 11887523 11887575 -77616978 - LTR30 LTR ERV1 -670 52 1 507 109 40 10 chr17 11888824 11888925 -77615628 + CT-rich Low_complexity Low_complexity 1 104 0 963 271 69 45 chr17 11888926 11889476 -77615077 - HAL1 LINE L1 -875 1632 1070 882 265 83 66 chr17 11889996 11890385 -77614168 + MLT1G LTR MaLR 4 400 -190 202 250 0 17 chr17 11892039 11892061 -77612492 + (TTA)n Simple_repeat Simple_repeat 3 24 -37 3703 123 111 2 chr17 11892061 11892647 -77611906 + MER39B LTR ERV1 4 653 0 202 250 0 17 chr17 11892647 11892684 -77611869 + (TTA)n Simple_repeat Simple_repeat 24 61 0 195 356 144 0 chr17 11893073 11893191 -77611362 - MER5A DNA MER1_type 0 189 55 502 241 12 80 chr17 11893673 11893835 -77610718 + MER117 DNA MER1_type 15 165 -32 365 327 91 44 chr17 11894667 11895074 -77609479 + MLT1K LTR MaLR 121 546 -42 1136 131 0 0 chr17 11896930 11897098 -77607455 + Charlie3 DNA MER1_type 3 170 -2540 202 215 15 92 chr17 11897224 11897289 -77607264 - MIR SINE MIR -105 157 98 185 143 14 57 chr17 11898860 11898930 -77605623 + CT-rich Low_complexity Low_complexity 3 69 0 1631 153 60 14 chr17 11900514 11900795 -77603758 + AluJo SINE Alu 7 300 -12 2199 82 4 0 chr17 11901324 11901594 -77602959 - AluSq SINE Alu -17 296 26 25 0 0 0 chr17 11901613 11901638 -77602915 + AT_rich Low_complexity Low_complexity 1 25 0 2380 79 0 16 chr17 11902156 11902471 -77602082 + AluY SINE Alu 1 310 -1 3272 191 84 39 chr17 11903224 11903471 -77601082 + L1MC3 LINE L1 6731 6965 -820 1946 146 3 7 chr17 11903471 11903765 -77600788 - AluJo SINE Alu -13 299 7 3272 191 84 39 chr17 11903765 11904375 -77600178 + L1MC3 LINE L1 6965 7627 -158 2309 53 3 59 chr17 11904375 11904709 -77599844 + AluY SINE Alu 1 317 0 234 265 88 61 chr17 11906048 11906195 -77598358 - MIR SINE MIR 0 262 112 1763 151 70 7 chr17 11906526 11906810 -77597743 + AluJb SINE Alu 1 302 -10 22 0 0 0 chr17 11908480 11908502 -77596051 + AT_rich Low_complexity Low_complexity 1 22 0 508 273 6 51 chr17 11909154 11909330 -77595223 + MER117 DNA MER1_type 8 175 -22 1692 177 30 74 chr17 11910629 11911035 -77593518 + MLT1B LTR MaLR 3 390 0 723 225 109 101 chr17 11911170 11911636 -77592917 - MLT1H LTR MaLR 0 549 80 336 296 57 23 chr17 11912574 11912750 -77591803 - MLT1K LTR MaLR 0 588 407 201 298 298 46 chr17 11913132 11913350 -77591203 + L3 LINE CR1 712 984 -593 272 352 47 16 chr17 11913350 11913478 -77591075 + L3 LINE CR1 1377 1508 -69 201 74 0 0 chr17 11913490 11913517 -77591036 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 638 278 129 39 chr17 11913562 11913871 -77590682 - LTR16A LTR ERVL -24 426 90 756 315 118 28 chr17 11913891 11914316 -77590237 - L2 LINE L2 -44 3269 2807 210 309 41 41 chr17 11914416 11914513 -77590040 - MIR SINE MIR -63 145 49 381 317 98 6 chr17 11914528 11914706 -77589847 - MLT1L LTR MaLR 0 615 421 299 200 71 0 chr17 11914706 11914776 -77589777 - MLT1I LTR MaLR 0 409 335 193 105 0 70 chr17 11914779 11914836 -77589717 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 223 193 35 0 chr17 11914838 11914895 -77589658 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 699 305 37 55 chr17 11914897 11915222 -77589331 - MLT1I LTR MaLR -85 324 6 2235 126 0 0 chr17 11915231 11915532 -77589021 + AluSx SINE Alu 1 301 -11 1110 66 11 22 chr17 11915624 11915806 -77588747 + (GAA)n Simple_repeat Simple_repeat 1 180 0 205 345 0 0 chr17 11916240 11916298 -77588255 + L3b LINE CR1 1522 1579 -4 185 354 98 12 chr17 11916593 11916757 -77587796 + L2 LINE L2 2218 2395 -919 326 295 140 83 chr17 11916762 11917417 -77587136 + L2 LINE L2 2565 3268 -4 291 104 0 0 chr17 11918808 11918856 -77585697 + (CCG)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr17 11918950 11919000 -77585553 + GC_rich Low_complexity Low_complexity 1 50 0 225 0 0 0 chr17 11919236 11919261 -77585292 + (CCG)n Simple_repeat Simple_repeat 2 26 0 201 203 29 29 chr17 11919426 11919495 -77585058 + (CCG)n Simple_repeat Simple_repeat 3 71 0 29 98 0 0 chr17 11919507 11919599 -77584954 + GC_rich Low_complexity Low_complexity 1 92 0 23 68 0 0 chr17 11919724 11919768 -77584785 + GC_rich Low_complexity Low_complexity 1 44 0 23 78 0 0 chr17 11919813 11919864 -77584689 + GC_rich Low_complexity Low_complexity 1 51 0 2281 109 0 0 chr17 11924386 11924689 -77579864 + AluY SINE Alu 2 304 -7 2222 119 0 0 chr17 11925948 11926250 -77578303 - AluY SINE Alu -9 302 1 327 326 16 8 chr17 11926506 11926635 -77577918 - MIR3 SINE MIR -46 162 33 2682 40 3 0 chr17 11927034 11927336 -77577217 + AluY SINE Alu 1 303 -8 366 143 0 0 chr17 11927460 11927523 -77577030 + (TG)n Simple_repeat Simple_repeat 1 63 0 667 290 131 24 chr17 11927769 11928152 -77576401 - MARNA DNA Mariner -85 501 78 552 198 108 25 chr17 11929100 11929257 -77575296 - MIR SINE MIR -18 244 75 246 271 0 0 chr17 11932396 11932455 -77572098 + MIR SINE MIR 57 115 -147 376 330 153 40 chr17 11932673 11933052 -77571501 - L3 LINE CR1 -4 1573 1152 470 252 67 8 chr17 11933235 11933354 -77571199 + L2 LINE L2 3182 3307 -6 226 225 25 12 chr17 11933488 11933568 -77570985 + GA-rich Low_complexity Low_complexity 3 83 0 208 204 0 20 chr17 11934049 11934098 -77570455 - L2 LINE L2 0 3313 3266 * 600 268 50 88 chr17 11934065 11934326 -77570227 - MIR SINE MIR -10 252 2 2222 118 0 3 chr17 11934389 11934694 -77569859 + AluSx SINE Alu 1 304 -8 1991 173 0 0 chr17 11935555 11935867 -77568686 + AluJb SINE Alu 1 312 0 183 184 0 0 chr17 11935869 11935907 -77568646 + GA-rich Low_complexity Low_complexity 3 40 0 26 0 0 0 chr17 11936168 11936194 -77568359 + AT_rich Low_complexity Low_complexity 1 26 0 349 197 7 26 chr17 11937106 11937258 -77567295 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 192 182 0 0 chr17 11937314 11937358 -77567195 + GA-rich Low_complexity Low_complexity 1 44 0 677 319 40 12 chr17 11937377 11937625 -77566928 + MIR SINE MIR 6 260 -2 264 330 0 28 chr17 11938648 11938830 -77565723 + CT-rich Low_complexity Low_complexity 4 180 0 372 296 13 13 chr17 11938905 11939064 -77565489 + CT-rich Low_complexity Low_complexity 1 159 0 2486 173 45 25 chr17 11939671 11940220 -77564333 - L1MB7 LINE L1 -196 5988 5429 702 179 7 26 chr17 11940217 11940368 -77564185 - L1MB7 LINE L1 -1113 5033 4886 * 219 299 15 0 chr17 11942277 11942344 -77562209 - MIR SINE MIR -110 152 85 722 260 80 10 chr17 11942386 11942586 -77561967 - MIR SINE MIR -4 258 45 489 230 69 46 chr17 11943262 11943436 -77561117 + MER5B DNA MER1_type 1 178 0 828 163 16 79 chr17 11943487 11943677 -77560876 - MER5B DNA MER1_type 0 178 1 428 301 21 35 chr17 11944488 11944631 -77559922 + MER5A DNA MER1_type 9 149 -40 450 319 65 11 chr17 11944658 11944843 -77559710 + MIR SINE MIR 47 241 -21 236 237 0 66 chr17 11945138 11945214 -77559339 - MIR SINE MIR 0 262 192 559 199 127 0 chr17 11945433 11945590 -77558963 + MER5A DNA MER1_type 4 183 -6 454 287 33 0 chr17 11945604 11945726 -77558827 - MER5B DNA MER1_type 0 178 53 533 325 137 35 chr17 11946529 11946990 -77557563 + L2 LINE L2 2804 3311 -2 2185 112 6 19 chr17 11947204 11947516 -77557037 - AluSc SINE Alu -1 308 1 245 276 0 0 chr17 11948055 11948113 -77556440 + MER3 DNA MER1_type 40 97 -112 2227 119 0 10 chr17 11948137 11948448 -77556105 - AluSg SINE Alu 0 310 3 1043 195 0 79 chr17 11948691 11948932 -77555621 - MER58A DNA MER1_type -1 223 2 413 266 26 45 chr17 11949428 11949582 -77554971 + L3 LINE CR1 615 765 -812 2141 103 0 67 chr17 11949607 11949936 -77554617 - AluSq SINE Alu -6 307 1 361 220 83 22 chr17 11950600 11950773 -77553780 + MIR SINE MIR 1 187 -63 554 299 41 15 chr17 11951233 11951430 -77553123 - MIR SINE MIR -40 222 21 472 270 152 53 chr17 11953653 11954147 -77550406 - L2 LINE L2 -56 3257 2670 2182 130 0 7 chr17 11954147 11954454 -77550099 - AluSx SINE Alu -7 305 1 472 270 152 53 chr17 11954454 11954584 -77549969 - L2 LINE L2 -643 2670 2554 303 233 117 42 chr17 11954614 11954734 -77549819 - L1MC4 LINE L1 0 8042 7914 644 212 0 17 chr17 11954777 11954956 -77549597 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 474 301 0 6 chr17 11954956 11955112 -77549441 - L1MC4 LINE L1 -146 7896 7742 370 190 0 13 chr17 11955139 11955218 -77549335 - L2 LINE L2 -803 2511 2434 393 22 0 0 chr17 11955412 11955458 -77549095 + (TC)n Simple_repeat Simple_repeat 1 46 0 351 0 0 0 chr17 11955457 11955496 -77549057 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 409 248 31 62 chr17 11955595 11955724 -77548829 + L2 LINE L2 3148 3272 0 1236 259 161 20 chr17 11955762 11956210 -77548343 - MLT1J LTR MaLR 0 511 1 180 357 63 28 chr17 11957423 11957566 -77546987 + MIR SINE MIR 84 231 -31 245 333 21 0 chr17 11957741 11957834 -77546719 - MIR SINE MIR -89 173 79 228 67 0 0 chr17 11957978 11958008 -77546545 + (GA)n Simple_repeat Simple_repeat 2 31 0 2707 247 81 19 chr17 11959133 11960008 -77544545 - L1M4 LINE L1 -1779 4367 3439 2455 56 7 0 chr17 11960578 11960882 -77543671 - L1PA6 LINE L1 -1 6153 5848 207 433 8 8 chr17 11961506 11961626 -77542927 - MIR3 SINE MIR -86 122 3 205 310 0 0 chr17 11962237 11962295 -77542258 + (CA)n Simple_repeat Simple_repeat 1 58 0 788 236 20 86 chr17 11962339 11962631 -77541922 - MLT1J LTR MaLR -2 509 237 271 231 0 62 chr17 11962688 11962753 -77541800 - MLT1L LTR MaLR -554 61 1 1772 112 0 12 chr17 11964014 11964264 -77540289 - AluSx SINE Alu -13 299 53 606 187 0 0 chr17 11965282 11965389 -77539164 + FRAM SINE Alu 1 99 -77 623 93 0 10 chr17 11965390 11965487 -77539066 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 1497 184 52 4 chr17 11965580 11965847 -77538706 + AluJb SINE Alu 1 280 -32 282 198 0 57 chr17 11965851 11965957 -77538596 + GA-rich Low_complexity Low_complexity 4 103 0 907 178 32 95 chr17 11966063 11966401 -77538152 - L1MC5 LINE L1 -31 7930 7614 271 246 56 56 chr17 11966405 11966531 -77538022 - L1MC/D LINE L1 -1991 5817 5692 400 120 13 40 chr17 11966677 11966752 -77537801 + FAM SINE Alu 104 176 -3 288 321 50 27 chr17 11966847 11967151 -77537402 - L1MC/D LINE L1 -1825 4321 4013 367 270 76 53 chr17 11967279 11967635 -77536918 - L1MC/D LINE L1 -2173 3973 3610 258 116 0 0 chr17 11967736 11967779 -77536774 + (TA)n Simple_repeat Simple_repeat 2 44 0 24 53 0 0 chr17 11968081 11968119 -77536434 + AT_rich Low_complexity Low_complexity 1 38 0 2458 85 0 0 chr17 11968521 11968826 -77535727 - AluY SINE Alu -6 305 1 300 168 30 20 chr17 11969143 11969244 -77535309 + (TTAA)n Simple_repeat Simple_repeat 4 105 0 1480 158 19 68 chr17 11969472 11969540 -77535013 - MLT1B LTR MaLR 0 390 320 2183 88 0 4 chr17 11969540 11969838 -77534715 + AluSc SINE Alu 11 307 0 1480 158 19 68 chr17 11969838 11970079 -77534474 - MLT1B LTR MaLR -70 320 95 1190 141 157 0 chr17 11970088 11970330 -77534223 - L1MA8 LINE L1 -19 6272 5993 669 128 0 9 chr17 11970332 11970441 -77534112 - MLT1B LTR MaLR -257 133 26 584 140 0 0 chr17 11970441 11970534 -77534019 - L1PA8 LINE L1 -146 6026 5934 722 107 0 0 chr17 11970534 11970635 -77533918 + L1PA8 LINE L1 6059 6161 -11 23 0 0 0 chr17 11970635 11970658 -77533895 + AT_rich Low_complexity Low_complexity 1 23 0 267 315 110 46 chr17 11970693 11971001 -77533552 - L2 LINE L2 -268 3045 2714 2327 103 0 0 chr17 11971001 11971301 -77533252 - AluSp SINE Alu -13 300 1 267 315 110 46 chr17 11971301 11971345 -77533208 - L2 LINE L2 -599 2714 2674 218 250 48 65 chr17 11971918 11972042 -77532511 + MIR SINE MIR 141 262 0 2404 96 0 0 chr17 11972058 11972360 -77532193 - AluSc SINE Alu -7 302 1 476 140 11 65 chr17 11972823 11972916 -77531637 - Tigger7 DNA MER2_type 0 2487 2400 2745 181 50 6 chr17 11972919 11973417 -77531136 - Tigger7 DNA MER2_type -1965 522 3 1420 284 99 58 chr17 11973475 11973858 -77530695 - L2 LINE L2 0 3313 2947 2484 76 0 3 chr17 11973858 11974161 -77530392 + AluY SINE Alu 1 302 -9 1420 284 99 58 chr17 11974161 11975410 -77529143 - L2 LINE L2 -366 2947 1611 838 309 73 33 chr17 11975443 11975896 -77528657 - MLT1J LTR MaLR 0 511 41 250 325 48 48 chr17 11975966 11976194 -77528359 - L2 LINE L2 -1741 1573 1346 448 303 166 0 chr17 11976217 11976428 -77528125 - MIR SINE MIR -15 247 2 444 322 82 14 chr17 11976494 11976786 -77527767 - L2 LINE L2 -2050 1264 953 386 111 0 0 chr17 11977156 11977210 -77527343 - MADE1 DNA Mariner 0 80 27 487 260 17 46 chr17 11977416 11977589 -77526964 - MIR SINE MIR 0 262 95 2076 153 44 114 chr17 11977589 11978040 -77526513 - MLT1D LTR MaLR 0 505 97 2383 101 0 7 chr17 11978040 11978348 -77526205 + AluSc SINE Alu 1 306 -3 2076 153 44 114 chr17 11978348 11978439 -77526114 - MLT1D LTR MaLR -408 97 1 418 303 49 27 chr17 11978508 11978693 -77525860 - MER117 DNA MER1_type -3 194 6 228 67 0 0 chr17 11978831 11978861 -77525692 + (T)n Simple_repeat Simple_repeat 1 30 0 2827 70 3 3 chr17 11980018 11980373 -77524180 - THE1A LTR MaLR 0 355 1 271 278 191 19 chr17 11980479 11980641 -77523912 - MIR3 SINE MIR -5 203 14 180 0 0 0 chr17 11981228 11981248 -77523305 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 301 263 6 0 chr17 11981361 11981544 -77523009 + (TG)n Simple_repeat Simple_repeat 1 184 0 460 288 0 0 chr17 11981558 11981728 -77522825 + (TG)n Simple_repeat Simple_repeat 1 170 0 216 340 33 33 chr17 11983279 11983432 -77521121 + MIR SINE MIR 71 223 -39 270 153 0 0 chr17 11985289 11985348 -77519205 + T-rich Low_complexity Low_complexity 1 59 0 554 270 108 45 chr17 11985522 11985855 -77518698 - MLT1J LTR MaLR -147 364 11 278 275 83 0 chr17 11985877 11985986 -77518567 - L2 LINE L2 -88 3225 3108 217 257 114 0 chr17 11986016 11986086 -77518467 - MIR3 SINE MIR -12 196 119 272 289 44 0 chr17 11986276 11986366 -77518187 - MIR3 SINE MIR -10 198 105 197 311 30 53 chr17 11986707 11986839 -77517714 - L3 LINE CR1 -1113 464 336 1805 147 18 18 chr17 11987151 11987437 -77517116 - AluJo SINE Alu -22 290 5 350 266 101 24 chr17 11988141 11988322 -77516231 - MLT1J LTR MaLR -235 199 20 278 350 23 23 chr17 11988370 11988584 -77515969 - L2 LINE L2 -12 3301 3088 685 278 65 4 chr17 11988621 11988869 -77515684 - L2 LINE L2 -365 2949 2687 2279 96 7 13 chr17 11988869 11989003 -77515550 + AluSg SINE Alu 1 134 -176 2493 78 3 0 chr17 11989003 11989309 -77515244 + AluY SINE Alu 1 307 -4 2279 96 7 13 chr17 11989309 11989477 -77515076 + AluSg SINE Alu 134 301 -9 2142 118 0 0 chr17 11989937 11990250 -77514303 - AluSg SINE Alu 0 313 1 27 62 0 0 chr17 11990443 11990491 -77514062 + AT_rich Low_complexity Low_complexity 1 48 0 487 163 1 0 chr17 11991127 11991221 -77513332 + MER63 DNA MER1_type 656 751 -311 253 313 68 12 chr17 11991313 11991476 -77513077 - L1ME LINE L1 -540 5564 5393 266 269 0 0 chr17 11991794 11991861 -77512692 - L2 LINE L2 -262 3051 2985 21 0 0 0 chr17 11992630 11992651 -77511902 + AT_rich Low_complexity Low_complexity 1 21 0 2322 104 0 13 chr17 11992699 11993016 -77511537 - AluSq SINE Alu 0 313 1 751 311 107 24 chr17 11993032 11993987 -77510566 - L1ME LINE L1 -1389 4740 3707 360 329 120 48 chr17 11994278 11994566 -77509987 - L1ME LINE L1 -2744 3385 3119 246 32 0 0 chr17 11994566 11994597 -77509956 + (TC)n Simple_repeat Simple_repeat 2 32 0 2288 104 0 3 chr17 11994597 11994896 -77509657 - AluSg SINE Alu -12 298 1 360 329 120 48 chr17 11994896 11995290 -77509263 - L1ME LINE L1 -3009 3120 2653 267 306 0 16 chr17 11995786 11995910 -77508643 + CT-rich Low_complexity Low_complexity 3 124 0 27 87 0 0 chr17 11995982 11996051 -77508502 + AT_rich Low_complexity Low_complexity 1 69 0 429 177 44 99 chr17 11996181 11996362 -77508191 - L1MC5 LINE L1 -179 7782 7612 365 343 14 42 chr17 11996817 11996960 -77507593 + L2 LINE L2 3134 3272 0 257 301 10 10 chr17 11997038 11997141 -77507412 - L1ME LINE L1 -4972 1147 1045 2374 82 0 0 chr17 11997251 11997542 -77507011 - AluSx SINE Alu -8 304 14 2219 113 7 0 chr17 11998554 11998846 -77505707 + AluSq SINE Alu 1 294 -19 189 0 0 0 chr17 11998846 11998867 -77505686 + (GA)n Simple_repeat Simple_repeat 2 22 0 270 254 30 15 chr17 11999449 11999516 -77505037 - MLT1J LTR MaLR -333 178 111 1309 265 48 69 chr17 11999641 11999939 -77504614 - L1MEc LINE L1 -3998 2398 2095 1639 91 36 0 chr17 11999939 12000160 -77504393 - MER30 DNA MER1_type 0 230 2 1309 265 48 69 chr17 12000160 12000654 -77503899 - L1MEc LINE L1 -4301 2095 1623 258 179 54 0 chr17 12000686 12000742 -77503811 - L1MC3 LINE L1 0 7785 7727 233 225 84 14 chr17 12001437 12001508 -77503045 - MIR3 SINE MIR -46 162 87 2390 65 7 0 chr17 12001549 12001877 -77502676 + AluSp SINE Alu 1 330 0 242 204 0 0 chr17 12002042 12002096 -77502457 - L1MB8 LINE L1 0 6178 6125 268 297 25 25 chr17 12002544 12002662 -77501891 - L2 LINE L2 0 3272 3155 183 349 20 59 chr17 12002985 12003137 -77501416 - MIR3 SINE MIR -60 148 3 380 266 44 0 chr17 12003921 12004034 -77500519 + MIR3 SINE MIR 87 204 -4 2337 71 10 7 chr17 12004165 12004460 -77500093 + AluY SINE Alu 1 296 -15 315 333 0 10 chr17 12005485 12005587 -77498966 + MIR3 SINE MIR 67 167 -41 1847 119 0 0 chr17 12005720 12006012 -77498541 + AluSx SINE Alu 30 321 0 405 54 0 0 chr17 12006082 12006138 -77498415 + (TC)n Simple_repeat Simple_repeat 1 56 0 27 29 0 0 chr17 12006161 12006195 -77498358 + AT_rich Low_complexity Low_complexity 1 34 0 209 243 149 14 chr17 12006234 12006308 -77498245 + MIR SINE MIR 65 148 -114 196 365 72 12 chr17 12006345 12006512 -77498041 + MIR SINE MIR 3 179 -83 847 271 21 21 chr17 12006523 12006759 -77497794 + MIR SINE MIR 14 249 -13 294 262 103 68 chr17 12006837 12007100 -77497453 - L2 LINE L2 -78 3235 2964 233 146 21 0 chr17 12008067 12008115 -77496438 + CT-rich Low_complexity Low_complexity 2 50 0 721 258 88 46 chr17 12008208 12008468 -77496085 - MLT1K LTR MaLR -220 368 98 240 35 0 0 chr17 12008663 12008692 -77495861 + (GA)n Simple_repeat Simple_repeat 2 30 0 240 276 11 23 chr17 12010153 12010240 -77494313 + CT-rich Low_complexity Low_complexity 4 89 0 535 214 28 20 chr17 12011433 12011647 -77492906 + MER21B LTR ERV1 12 265 -598 186 43 0 0 chr17 12011664 12011687 -77492866 + (TTC)n Simple_repeat Simple_repeat 2 24 0 1907 95 0 0 chr17 12011689 12011930 -77492623 - AluSx SINE Alu -10 302 62 515 133 0 0 chr17 12011930 12012005 -77492548 + AluS SINE Alu 2 76 -237 1430 251 39 78 chr17 12012008 12012545 -77492008 + MER21B LTR ERV1 297 812 -51 375 315 22 7 chr17 12013885 12014034 -77490519 + MIR SINE MIR 21 168 -49 1894 116 27 48 chr17 12014091 12014411 -77490142 + AluSx SINE Alu 1 314 0 581 261 202 44 chr17 12015294 12015635 -77488918 - LTR16C LTR ERVL 0 491 97 2171 77 0 57 chr17 12016566 12016892 -77487661 - AluSc SINE Alu 0 309 1 229 228 89 50 chr17 12017014 12017115 -77487438 + L1ME4a LINE L1 5676 5780 -341 755 62 0 0 chr17 12017258 12017354 -77487199 + L1PA5 LINE L1 6059 6154 0 231 293 49 32 chr17 12017555 12017678 -77486875 + L1ME4a LINE L1 5997 6121 0 766 236 151 46 chr17 12018380 12018840 -77485713 - MLT1H LTR MaLR -7 548 7 269 271 101 96 chr17 12019440 12019505 -77485048 - MIR SINE MIR -62 200 137 2166 128 3 0 chr17 12019505 12019810 -77484743 - AluSx SINE Alu -6 306 1 269 271 101 96 chr17 12019810 12019932 -77484621 - MIR SINE MIR -125 137 12 259 224 26 13 chr17 12021075 12021151 -77483402 - MIR3 SINE MIR -5 203 127 501 269 70 21 chr17 12021523 12021709 -77482844 - LTR16C LTR ERVL 0 491 297 846 139 0 0 chr17 12022050 12022165 -77482388 - AluSq/x SINE Alu -198 115 1 4185 243 74 40 chr17 12022165 12022821 -77481732 - L1M4 LINE L1 -693 5491 4859 4134 143 7 21 chr17 12022821 12023527 -77481026 - L1MA5 LINE L1 -6 6294 5599 4185 243 74 40 chr17 12023527 12024578 -77479975 - L1M4 LINE L1 -1325 4859 3712 468 299 70 0 chr17 12025635 12025822 -77478731 - MIR SINE MIR -14 248 49 201 209 30 0 chr17 12026645 12026712 -77477841 + (TTAA)n Simple_repeat Simple_repeat 2 70 0 227 217 22 0 chr17 12026830 12026876 -77477677 + CT-rich Low_complexity Low_complexity 1 47 0 556 122 0 0 chr17 12028252 12028334 -77476219 - AluSg/x SINE Alu -96 214 133 2381 53 0 3 chr17 12028334 12028656 -77475897 - AluY SINE Alu 0 321 1 4077 65 2 0 chr17 12028988 12029498 -77475055 + L1PA8 LINE L1 5662 6172 0 309 365 28 62 chr17 12029646 12029936 -77474617 + L2 LINE L2 2992 3271 -1 2310 85 3 0 chr17 12031353 12031647 -77472906 + AluSg SINE Alu 1 295 -15 878 200 42 33 chr17 12032141 12032356 -77472197 - MER20 DNA MER1_type -2 217 1 438 294 150 7 chr17 12032370 12032523 -77472030 - MER5A DNA MER1_type -6 183 9 381 306 21 37 chr17 12033675 12033985 -77470568 - LTR33 LTR ERVL -147 374 13 1951 75 0 57 chr17 12035105 12035408 -77469145 + AluY SINE Alu 39 325 0 256 219 0 16 chr17 12035557 12035621 -77468932 - L1ME4a LINE L1 -5 6116 6054 981 233 68 35 chr17 12035710 12036079 -77468474 - L1ME4a LINE L1 -195 5926 5546 2674 154 10 30 chr17 12036199 12036540 -77468013 - L1MB2 LINE L1 -2 6169 5823 2418 75 0 3 chr17 12036540 12036835 -77467718 - AluY SINE Alu -17 294 1 1643 155 44 30 chr17 12036839 12037136 -77467417 - AluSx SINE Alu -11 301 1 2674 154 10 30 chr17 12037136 12037283 -77467270 - L1MB2 LINE L1 -351 5820 5686 5402 48 1 12 chr17 12038014 12038454 -77466099 + L1PA8 LINE L1 5514 5946 -226 2356 101 0 7 chr17 12038454 12038762 -77465791 + AluSg SINE Alu 1 306 -4 5402 48 1 12 chr17 12038762 12038987 -77465566 + L1PA8 LINE L1 5946 6172 0 384 293 80 56 chr17 12039208 12039495 -77465058 - L1ME4a LINE L1 -1312 4834 4541 31 58 0 0 chr17 12039519 12039571 -77464982 + AT_rich Low_complexity Low_complexity 1 52 0 288 231 0 0 chr17 12039905 12039970 -77464583 - L2 LINE L2 -1 3271 3207 1758 177 0 23 chr17 12040317 12040617 -77463936 - AluJo SINE Alu -19 293 1 217 304 47 58 chr17 12040731 12040922 -77463631 + MIR SINE MIR 20 208 -54 2562 170 18 7 chr17 12041840 12042287 -77462266 + MER66A LTR ERV1 27 478 0 1816 203 27 33 chr17 12042306 12043101 -77461452 - L1ME3 LINE L1 -24 6138 5427 282 359 16 31 chr17 12043101 12043293 -77461260 + MIR SINE MIR 20 208 -54 183 184 0 0 chr17 12043333 12043371 -77461182 + (TTA)n Simple_repeat Simple_repeat 1 38 0 2167 127 0 0 chr17 12043450 12043754 -77460799 - AluSx SINE Alu 0 304 1 21 57 0 0 chr17 12043754 12043789 -77460764 + AT_rich Low_complexity Low_complexity 1 35 0 539 328 64 39 chr17 12043943 12044337 -77460216 - L2 LINE L2 -130 3183 2770 1766 165 29 0 chr17 12044337 12044616 -77459937 - AluJb SINE Alu -25 287 1 539 328 64 39 chr17 12044616 12044933 -77459620 - L2 LINE L2 -543 2770 2462 498 192 116 111 chr17 12045022 12045220 -77459333 + MLT1C LTR MaLR 1 199 -191 348 310 209 17 chr17 12045228 12045763 -77458790 - L2 LINE L2 -1470 1844 1207 216 171 0 0 chr17 12046719 12046754 -77457799 + (TAG)n Simple_repeat Simple_repeat 1 35 0 2396 97 0 0 chr17 12046833 12047131 -77457422 - AluSg SINE Alu -12 298 1 274 301 192 19 chr17 12047146 12047302 -77457251 - MIR SINE MIR -73 189 7 200 305 127 0 chr17 12047384 12047510 -77457043 + MIR SINE MIR 35 168 -85 304 371 29 6 chr17 12048113 12048283 -77456270 + MIR3 SINE MIR 30 203 -5 223 308 70 35 chr17 12048862 12049005 -77455548 + MIR3 SINE MIR 22 169 -39 345 280 34 8 chr17 12049672 12049790 -77454763 - MIR SINE MIR -12 250 130 523 280 171 47 chr17 12050175 12050790 -77453763 - L1MC4a LINE L1 -1854 5954 5264 258 314 49 0 chr17 12051392 12051494 -77453059 - HAL1b LINE L1 -752 596 490 221 139 23 0 chr17 12051521 12051564 -77452989 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1237 267 54 45 chr17 12051829 12052455 -77452098 - L1ME3A LINE L1 -268 5902 5271 230 187 0 67 chr17 12052899 12052974 -77451579 + (TAG)n Simple_repeat Simple_repeat 2 71 0 201 311 33 0 chr17 12053047 12053108 -77451445 - MIR SINE MIR -94 168 106 317 332 56 32 chr17 12053274 12053524 -77451029 - HAL1 LINE L1 -1098 1409 1154 2180 96 10 29 chr17 12054488 12054800 -77449753 - AluSc SINE Alu -3 306 1 770 217 56 22 chr17 12054942 12055122 -77449431 + MER5A DNA MER1_type 2 187 -2 291 145 0 11 chr17 12055400 12055456 -77449097 - Alu SINE Alu -257 44 1 838 194 35 0 chr17 12055613 12055783 -77448770 + MER5A DNA MER1_type 7 182 -7 443 250 23 15 chr17 12055942 12056074 -77448479 + MER5B DNA MER1_type 1 133 -45 876 195 11 26 chr17 12056075 12056265 -77448288 - L1PA11 LINE L1 -12 6162 5976 268 304 36 36 chr17 12056379 12056517 -77448036 - L1ME4a LINE L1 -24 6097 5960 533 136 22 49 chr17 12057267 12057451 -77447102 + (TA)n Simple_repeat Simple_repeat 2 180 0 1690 215 127 25 chr17 12058800 12059289 -77445264 - MLT1F LTR MaLR -3 539 1 314 248 211 0 chr17 12059493 12059602 -77444951 - L2 LINE L2 -5 3267 3136 193 330 20 10 chr17 12059712 12059812 -77444741 - L2 LINE L2 -408 2905 2805 1777 167 3 24 chr17 12060267 12060555 -77443998 - AluJo SINE Alu -30 282 1 2378 110 0 3 chr17 12061105 12061414 -77443139 - AluSx SINE Alu -4 308 1 304 341 127 0 chr17 12062151 12062183 -77442370 - MIR SINE MIR -13 249 222 282 29 0 0 chr17 12062183 12062218 -77442335 + (CATA)n Simple_repeat Simple_repeat 3 37 0 304 341 127 0 chr17 12062218 12062405 -77442148 - MIR SINE MIR -40 222 2 195 186 0 0 chr17 12063001 12063044 -77441509 + GA-rich Low_complexity Low_complexity 2 44 0 615 248 182 48 chr17 12063118 12063620 -77440933 - L2 LINE L2 0 3313 2752 1056 245 103 142 chr17 12063654 12064309 -77440244 - L2 LINE L2 -914 2400 1721 2008 101 4 8 chr17 12064309 12064576 -77439977 + AluSp SINE Alu 40 305 -8 1056 245 103 142 chr17 12064576 12064716 -77439837 - L2 LINE L2 -1593 1721 1577 204 40 0 0 chr17 12064716 12064741 -77439812 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1056 245 103 142 chr17 12064741 12065021 -77439532 - L2 LINE L2 -1737 1577 1366 644 179 18 0 chr17 12065024 12065136 -77439417 - MER81 DNA DNA 0 114 1 459 0 0 0 chr17 12066967 12067018 -77437535 + (TA)n Simple_repeat Simple_repeat 1 51 0 320 196 254 14 chr17 12068379 12068517 -77436036 + MIR SINE MIR 15 185 -77 532 216 136 19 chr17 12068609 12068771 -77435782 + MER5A DNA MER1_type 9 189 0 24 0 0 0 chr17 12068771 12068795 -77435758 + AT_rich Low_complexity Low_complexity 1 24 0 208 274 119 0 chr17 12069878 12069962 -77434591 + MIR3 SINE MIR 105 198 -10 1624 163 58 73 chr17 12070488 12070900 -77433653 + MSTB1 LTR MaLR 27 432 0 287 310 66 51 chr17 12071327 12071659 -77432894 + L2 LINE L2 2360 2696 -618 712 352 72 20 chr17 12071942 12072388 -77432165 + L2 LINE L2 2804 3272 0 191 311 200 0 chr17 12072419 12072509 -77432044 + MIR SINE MIR 33 140 -68 526 190 66 0 chr17 12072869 12072990 -77431563 - L1MC4 LINE L1 0 8042 7914 215 192 19 19 chr17 12073025 12073077 -77431476 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 275 189 0 81 chr17 12073086 12073160 -77431393 - L1MC4 LINE L1 -123 7919 7852 924 70 0 0 chr17 12073166 12073281 -77431272 - AluY SINE Alu 0 311 197 593 202 40 33 chr17 12073281 12073466 -77431087 - L1MC4 LINE L1 -95 7713 7584 1152 272 71 63 chr17 12073472 12073684 -77430869 - L1M4 LINE L1 -1717 4429 4220 2591 71 0 0 chr17 12073684 12073994 -77430559 - AluSq SINE Alu -3 310 1 1152 272 71 63 chr17 12073994 12074579 -77429974 - L1M4 LINE L1 -1926 4220 3625 * 1932 44 0 0 chr17 12074573 12074800 -77429753 - L1P3 LINE L1 -408 5746 5520 2309 66 3 10 chr17 12074800 12075098 -77429455 + L1PA8 LINE L1 5870 6169 -3 315 0 0 0 chr17 12075572 12075607 -77428946 + (TG)n Simple_repeat Simple_repeat 2 36 0 651 285 54 67 chr17 12075621 12076027 -77428526 - HAL1b LINE L1 -714 634 260 2277 104 7 0 chr17 12076769 12077067 -77427486 - AluSc SINE Alu -9 300 1 24 53 0 0 chr17 12077202 12077240 -77427313 + AT_rich Low_complexity Low_complexity 1 38 0 2280 111 0 13 chr17 12077582 12077898 -77426655 - AluSx SINE Alu 0 312 1 240 376 73 13 chr17 12078548 12078862 -77425691 + L2 LINE L2 2429 2761 -553 1732 190 0 10 chr17 12079365 12079665 -77424888 - AluJb SINE Alu -5 307 11 463 323 59 11 chr17 12080759 12080945 -77423608 - MLT1I LTR MaLR -196 213 19 252 329 71 0 chr17 12083278 12083363 -77421190 + MER5A DNA MER1_type 78 168 -21 253 241 101 0 chr17 12083429 12083508 -77421045 - MER5A DNA MER1_type -80 109 23 389 263 38 97 chr17 12083540 12083698 -77420855 - MER5B DNA MER1_type -3 175 28 2242 98 30 0 chr17 12083698 12083994 -77420559 + AluSg SINE Alu 1 305 -5 389 263 38 97 chr17 12083994 12084021 -77420532 - MER5B DNA MER1_type -150 28 1 244 232 56 99 chr17 12084762 12084904 -77419649 + L2 LINE L2 3137 3272 0 995 247 20 12 chr17 12085262 12085513 -77419040 - MIR SINE MIR 0 262 10 1284 149 5 0 chr17 12086452 12086640 -77417913 + MER5A DNA MER1_type 1 189 0 2206 104 37 0 chr17 12087611 12087910 -77416643 + AluSg SINE Alu 1 310 0 534 317 82 0 chr17 12088484 12088667 -77415886 - MIR SINE MIR -18 244 47 750 231 11 2 chr17 12088892 12089072 -77415481 + MER5A DNA MER1_type 5 178 0 2480 80 0 0 chr17 12089133 12089444 -77415109 - AluY SINE Alu 0 311 1 2417 93 0 0 chr17 12089573 12089873 -77414680 - AluSx SINE Alu -12 300 1 391 271 78 26 chr17 12090299 12090491 -77414062 + MIR SINE MIR 48 249 -13 1615 77 0 0 chr17 12090716 12090912 -77413641 - AluY SINE Alu -10 301 106 272 179 221 0 chr17 12091665 12091760 -77412793 - MLT1H LTR MaLR -13 536 421 837 238 35 53 chr17 12091829 12092111 -77412442 - MLT1H LTR MaLR -251 298 22 423 176 20 26 chr17 12092208 12092361 -77412192 + CT-rich Low_complexity Low_complexity 3 154 0 2326 80 26 7 chr17 12092982 12093284 -77411269 + AluSg SINE Alu 1 308 -2 403 247 73 7 chr17 12093317 12093467 -77411086 - MIR SINE MIR -1 261 102 205 219 16 16 chr17 12093873 12093937 -77410616 + (TTG)n Simple_repeat Simple_repeat 3 66 0 1387 225 21 56 chr17 12094009 12094387 -77410166 - MLT1A1 LTR MaLR 0 365 1 289 262 10 19 chr17 12094475 12094578 -77409975 + MER103 DNA DNA 54 155 -11 336 291 196 10 chr17 12094981 12095180 -77409373 - MIR SINE MIR -6 256 21 29 47 0 0 chr17 12095180 12095223 -77409330 + AT_rich Low_complexity Low_complexity 1 43 0 242 355 16 33 chr17 12096650 12096771 -77407782 + MIR SINE MIR 48 166 -96 1668 39 0 10 chr17 12097197 12097403 -77407150 + L1PA4 LINE L1 5949 6152 -3 201 169 0 0 chr17 12097406 12097448 -77407105 + A-rich Low_complexity Low_complexity 1 77 0 25 51 0 0 chr17 12097492 12097531 -77407022 + AT_rich Low_complexity Low_complexity 1 39 0 2142 115 0 0 chr17 12098098 12098402 -77406151 + AluSx SINE Alu 1 304 -8 269 350 83 6 chr17 12098868 12099025 -77405528 - LTR67 LTR ERVL -263 294 126 1927 119 0 39 chr17 12100646 12100957 -77403596 + AluSx SINE Alu 1 299 -13 254 206 16 0 chr17 12101383 12101446 -77403107 + (TA)n Simple_repeat Simple_repeat 2 65 0 390 21 0 0 chr17 12101499 12101546 -77403007 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 439 278 57 60 chr17 12101997 12102346 -77402207 + L1MEd LINE L1 862 1209 -4910 415 277 46 75 chr17 12102359 12102637 -77401916 + L1MEd LINE L1 1330 1655 -835 21 0 0 0 chr17 12102875 12102896 -77401657 + AT_rich Low_complexity Low_complexity 1 21 0 2207 75 7 19 chr17 12102898 12103205 -77401348 + AluY SINE Alu 1 303 -8 238 188 125 31 chr17 12103213 12103309 -77401244 + L1MC4 LINE L1 7938 8042 0 369 235 102 30 chr17 12103482 12103648 -77400905 + MIR3 SINE MIR 7 184 -24 793 328 42 56 chr17 12103723 12104297 -77400256 - MLT1K LTR MaLR -10 578 13 1991 109 0 3 chr17 12105303 12105609 -77398944 - AluSg SINE Alu 0 305 1 210 71 0 0 chr17 12105778 12105806 -77398747 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 412 274 122 17 chr17 12106208 12106445 -77398108 - MIR SINE MIR 0 262 1 1786 234 106 48 chr17 12106745 12106952 -77397601 - MLT1E LTR MaLR 0 593 400 2389 70 0 16 chr17 12106952 12107265 -77397288 - AluY SINE Alu -3 308 1 1786 234 106 48 chr17 12107265 12107604 -77396949 - MLT1E LTR MaLR -193 400 15 1929 108 0 34 chr17 12107675 12107990 -77396563 + AluSp SINE Alu 1 305 0 222 37 0 0 chr17 12107991 12108018 -77396535 + (CAAT)n Simple_repeat Simple_repeat 1 27 0 372 318 56 16 chr17 12108231 12108357 -77396196 - MIR SINE MIR -58 150 20 807 263 129 54 chr17 12108366 12108739 -77395814 + MLT1I LTR MaLR 6 406 -3 203 0 37 0 chr17 12109972 12109999 -77394554 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 327 286 0 20 chr17 12110692 12110790 -77393763 - LTR67 LTR ERVL -3 554 459 2434 142 7 30 chr17 12110822 12111258 -77393295 + L1MB8 LINE L1 5748 6173 -5 3696 68 0 2 chr17 12111264 12111731 -77392822 - L1PA7 LINE L1 -6 6148 5683 782 53 0 0 chr17 12111731 12111825 -77392728 + L1PA7 LINE L1 5559 5652 -479 183 150 117 117 chr17 12111982 12112042 -77392511 + L2 LINE L2 3169 3228 -85 2005 146 0 3 chr17 12112230 12112539 -77392014 - AluSg SINE Alu -2 308 1 1002 161 36 0 chr17 12113107 12113275 -77391278 + MLT1A2 LTR MaLR 1 174 -200 276 111 0 0 chr17 12113286 12113331 -77391222 + (TC)n Simple_repeat Simple_repeat 2 46 0 202 182 0 0 chr17 12114321 12114354 -77390199 + polypyrimidine Low_complexity Low_complexity 1 33 0 953 208 15 15 chr17 12114364 12114561 -77389992 + MLT1A2 LTR MaLR 194 390 0 281 299 99 50 chr17 12114670 12114891 -77389662 + L2 LINE L2 3081 3312 -1 1553 172 35 118 chr17 12116491 12116916 -77387637 - MLT1B LTR MaLR 0 390 1 632 225 135 52 chr17 12117045 12117312 -77387241 - LTR16A1 LTR ERVL -6 451 163 250 286 14 14 chr17 12117691 12117761 -77386792 + MIR SINE MIR 34 103 -159 279 310 39 39 chr17 12118245 12118374 -77386179 - L2 LINE L2 0 3313 3185 188 298 67 48 chr17 12118689 12118793 -77385760 + MIR SINE MIR 32 137 -125 184 406 16 8 chr17 12119567 12119695 -77384858 + L3 LINE CR1 1362 1490 -87 792 235 81 7 chr17 12120601 12120842 -77383711 + MIR SINE MIR 7 260 -2 529 263 78 39 chr17 12121710 12121889 -77382664 + MIR SINE MIR 73 258 -4 192 77 0 0 chr17 12121898 12121924 -77382629 + (TAG)n Simple_repeat Simple_repeat 1 26 0 308 200 40 40 chr17 12121960 12122035 -77382518 + L2 LINE L2 3235 3309 -4 2072 130 10 0 chr17 12122213 12122521 -77382032 + AluSx SINE Alu 1 311 -1 191 86 0 29 chr17 12122748 12122783 -77381770 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 857 234 18 31 chr17 12123312 12123538 -77381015 - MLT1A1 LTR MaLR -142 223 1 512 353 32 64 chr17 12123771 12123992 -77380561 - L2 LINE L2 -6 3266 3058 2194 103 0 0 chr17 12123992 12124294 -77380259 - AluSg SINE Alu 0 310 9 512 353 32 64 chr17 12124294 12124418 -77380135 - L2 LINE L2 -214 3058 2932 458 156 44 11 chr17 12124428 12124518 -77380035 + L1MD2 LINE L1 6059 6151 -208 188 322 133 0 chr17 12126311 12126401 -77378152 - MIR SINE MIR -3 259 158 1593 155 14 17 chr17 12126425 12126721 -77377832 + AluJo SINE Alu 1 295 -17 2011 104 11 0 chr17 12126723 12127002 -77377551 + AluSq SINE Alu 1 282 -31 2012 129 3 19 chr17 12127336 12127653 -77376900 + AluSx SINE Alu 1 312 0 1562 227 89 18 chr17 12127803 12128062 -77376491 - MLT1C LTR MaLR 0 467 163 2377 57 0 7 chr17 12128062 12128362 -77376191 - AluY SINE Alu -13 298 1 1562 227 89 18 chr17 12128362 12128538 -77376015 - MLT1C LTR MaLR -304 163 1 1690 115 0 8 chr17 12128551 12128795 -77375758 + AluSq SINE Alu 1 242 -71 669 95 11 0 chr17 12128795 12128890 -77375663 + AluSp/q SINE Alu 207 302 -11 24 0 0 0 chr17 12129166 12129190 -77375363 + AT_rich Low_complexity Low_complexity 1 24 0 391 296 136 43 chr17 12129543 12129823 -77374730 - L2 LINE L2 0 3313 3008 590 288 43 26 chr17 12129861 12130094 -77374459 + L3 LINE CR1 1297 1533 -44 203 278 139 14 chr17 12130094 12130166 -77374387 + L3 LINE CR1 1492 1572 -5 609 149 22 33 chr17 12130798 12130979 -77373574 + CT-rich Low_complexity Low_complexity 2 180 0 366 170 20 20 chr17 12131060 12131160 -77373393 + CT-rich Low_complexity Low_complexity 1 100 0 23 33 0 0 chr17 12131812 12131842 -77372711 + AT_rich Low_complexity Low_complexity 1 30 0 1011 206 15 0 chr17 12131881 12132080 -77372473 + L1ME1 LINE L1 5792 5993 -173 584 188 17 7 chr17 12132078 12132228 -77372325 - L1MC/D LINE L1 -469 5697 5587 * 800 286 150 48 chr17 12132293 12133064 -77371489 + L2 LINE L2 2423 3298 -15 2095 104 0 0 chr17 12133064 12133377 -77371176 + AluY SINE Alu 1 313 0 800 286 150 48 chr17 12133377 12133395 -77371158 + L2 LINE L2 3298 3313 0 427 223 97 10 chr17 12133468 12133571 -77370982 + MIR SINE MIR 140 251 -11 204 289 0 0 chr17 12134428 12134480 -77370073 + MER91A DNA MER1_type 11 62 -134 233 366 145 0 chr17 12134602 12134733 -77369820 + MIR3 SINE MIR 14 163 -45 2097 104 0 36 chr17 12135626 12135933 -77368620 + AluSg SINE Alu 1 296 -14 2290 90 0 0 chr17 12135980 12136279 -77368274 + AluY SINE Alu 1 299 -12 423 281 7 22 chr17 12136946 12137081 -77367472 + MIR SINE MIR 63 195 -67 2261 61 0 45 chr17 12137100 12137413 -77367140 + AluY SINE Alu 1 299 -12 427 275 7 144 chr17 12137426 12137731 -77366822 + L2 LINE L2 3009 3271 -1 549 277 116 18 chr17 12138204 12138428 -77366125 + L3b LINE CR1 1139 1384 -199 2076 92 4 0 chr17 12138562 12138855 -77365698 - AluSp SINE Alu 0 306 13 28 29 0 0 chr17 12139243 12139278 -77365275 + AT_rich Low_complexity Low_complexity 1 35 0 2288 79 0 0 chr17 12139305 12139596 -77364957 + AluY SINE Alu 14 304 -7 2887 187 26 6 chr17 12139602 12140137 -77364416 - MER74A LTR ERVL -12 546 1 2009 110 3 23 chr17 12140785 12141086 -77363467 - AluSx SINE Alu 0 312 18 652 280 48 0 chr17 12141331 12141499 -77363054 + MIR SINE MIR 87 262 0 479 276 31 33 chr17 12141718 12141966 -77362587 - L1MC4a LINE L1 -123 5998 5734 1961 152 0 0 chr17 12142090 12142393 -77362160 - AluJo SINE Alu -9 303 1 2196 85 10 0 chr17 12142837 12143131 -77361422 + AluSq SINE Alu 1 297 -16 730 163 47 0 chr17 12143592 12143721 -77360832 - AluJb SINE Alu -21 291 157 518 196 122 0 chr17 12144608 12144715 -77359838 - MLT1D LTR MaLR -384 121 2 341 289 12 0 chr17 12145366 12145449 -77359104 - L2 LINE L2 0 3272 3189 247 288 42 93 chr17 12146159 12146277 -77358276 - MIR3 SINE MIR -3 205 94 2219 87 16 10 chr17 12146915 12147224 -77357329 + AluSx SINE Alu 1 311 -1 1990 177 174 0 chr17 12147295 12147725 -77356828 + MLT1D LTR MaLR 1 505 0 1449 179 50 64 chr17 12148019 12148376 -77356177 + MLT1B LTR MaLR 15 366 -24 325 289 26 39 chr17 12148983 12149104 -77355449 - LTR33 LTR ERVL -65 456 336 2399 98 3 0 chr17 12149104 12149410 -77355143 + AluSx SINE Alu 1 307 -5 325 289 26 39 chr17 12149410 12149444 -77355109 - LTR33 LTR ERVL -185 336 303 284 271 0 12 chr17 12149690 12149775 -77354778 + L2 LINE L2 2985 3068 -245 2884 152 31 2 chr17 12149948 12150434 -77354119 - L1MC1 LINE L1 0 6613 6114 1273 208 0 8 chr17 12150435 12150671 -77353882 - AluJo SINE Alu -74 238 5 3521 159 40 12 chr17 12150675 12151501 -77353052 - L1MC1 LINE L1 -505 6108 5260 641 198 69 85 chr17 12151501 12151800 -77352753 - MLT1A1 LTR MaLR -47 349 37 3001 90 3 4 chr17 12151921 12152666 -77351887 - L1PA8 LINE L1 -4 6168 5227 7847 208 76 68 chr17 12152668 12155600 -77348953 - L1MC1 LINE L1 -1181 5245 2337 7940 19 0 0 chr17 12155600 12157151 -77347402 - L1PA2 LINE L1 -5 6150 4600 7847 208 76 68 chr17 12157151 12157352 -77347201 - L1MC1 LINE L1 -4089 2337 2139 534 100 0 0 chr17 12157352 12157422 -77347131 + AluSg/x SINE Alu 219 288 -22 7847 208 76 68 chr17 12157422 12157442 -77347111 - L1MC1 LINE L1 -4287 2139 2121 3054 59 0 0 chr17 12157442 12157817 -77346736 + L1PA8 LINE L1 5798 6172 0 7847 208 76 68 chr17 12157817 12157915 -77346638 - L1MC1 LINE L1 -4305 2121 2025 203 88 29 0 chr17 12157915 12157949 -77346604 + (TA)n Simple_repeat Simple_repeat 1 35 0 7847 208 76 68 chr17 12157949 12158544 -77346009 - L1MC1 LINE L1 -4401 2025 1295 189 107 0 0 chr17 12158566 12158594 -77345959 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1991 154 0 0 chr17 12159173 12159459 -77345094 + AluSx SINE Alu 1 286 -26 279 0 0 0 chr17 12159506 12159513 -77345040 + (TG)n Simple_repeat Simple_repeat 1 38 0 279 0 0 0 chr17 12159513 12159544 -77345009 + (TG)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr17 12159621 12159658 -77344895 + AT_rich Low_complexity Low_complexity 1 37 0 2291 111 0 0 chr17 12159670 12159967 -77344586 - AluSg SINE Alu -13 297 1 317 268 63 90 chr17 12160360 12160659 -77343894 + HAL1b LINE L1 277 567 -781 309 250 114 81 chr17 12161038 12161196 -77343357 + L1MDa LINE L1 2308 2459 -4081 2398 91 3 0 chr17 12161196 12161492 -77343061 + AluSp SINE Alu 1 297 -16 309 250 114 81 chr17 12161492 12161665 -77342888 + L1MDa LINE L1 2459 2650 -3890 1625 149 8 0 chr17 12161874 12162116 -77342437 + AluJo SINE Alu 23 266 -46 2233 124 7 0 chr17 12162576 12162875 -77341678 - AluSx SINE Alu -11 301 1 259 296 64 40 chr17 12164514 12164639 -77339914 + L2 LINE L2 3136 3263 -9 913 226 61 5 chr17 12165087 12165299 -77339254 + MER58A DNA MER1_type 1 224 0 302 275 11 22 chr17 12166467 12166558 -77337995 - MIR3 SINE MIR -30 178 89 1057 269 90 79 chr17 12166618 12167115 -77337438 - MLT1K LTR MaLR 0 588 26 192 265 93 74 chr17 12167658 12167820 -77336733 - MIR SINE MIR -52 210 46 1004 158 12 122 chr17 12167878 12168124 -77336429 + MER20 DNA MER1_type 1 219 0 1424 141 4 63 chr17 12169473 12169742 -77334811 - AluJo SINE Alu -21 291 39 2316 94 3 3 chr17 12169947 12170245 -77334308 - AluSc SINE Alu -11 298 1 193 325 16 71 chr17 12170560 12170686 -77333867 + MIR3 SINE MIR 9 127 -81 2201 133 3 0 chr17 12171394 12171703 -77332850 - AluSx SINE Alu -2 310 1 204 40 0 0 chr17 12171758 12171783 -77332770 + (CA)n Simple_repeat Simple_repeat 1 25 0 618 247 80 0 chr17 12172975 12173137 -77331416 + MER5B DNA MER1_type 2 176 -2 365 292 0 0 chr17 12173189 12173278 -77331275 + MER81 DNA DNA 25 113 -1 185 250 0 0 chr17 12173401 12173445 -77331108 + MIR SINE MIR 58 101 -161 432 82 0 0 chr17 12174149 12174210 -77330343 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 2508 75 0 3 chr17 12174634 12174942 -77329611 + AluSg SINE Alu 1 307 -3 655 258 81 10 chr17 12174954 12175163 -77329390 - MER102a DNA MER1_type -28 302 79 371 317 7 28 chr17 12175494 12175636 -77328917 - L2 LINE L2 -583 2731 2593 216 218 0 36 chr17 12176577 12176594 -77327959 + GA-rich Low_complexity Low_complexity 5 21 -36 1415 166 12 0 chr17 12176594 12176841 -77327712 + L1MA4 LINE L1 6046 6295 -5 216 218 0 36 chr17 12176841 12176878 -77327675 + GA-rich Low_complexity Low_complexity 21 57 0 272 251 109 59 chr17 12176882 12177117 -77327436 + MIR SINE MIR 3 259 -3 2095 152 0 13 chr17 12177862 12178178 -77326375 - AluSx SINE Alu 0 312 1 341 226 105 16 chr17 12178617 12178741 -77325812 - MIR3 SINE MIR -28 180 46 911 194 91 0 chr17 12178806 12178992 -77325561 - MER3 DNA MER1_type 0 209 7 527 296 106 5 chr17 12179072 12179271 -77325282 - MIR SINE MIR -32 230 12 2302 75 4 0 chr17 12179292 12179570 -77324983 - AluSq SINE Alu -16 297 19 251 71 24 0 chr17 12179865 12179907 -77324646 + (GA)n Simple_repeat Simple_repeat 2 44 0 2863 10 0 0 chr17 12180304 12180609 -77323944 + AluY SINE Alu 1 305 -6 2246 118 3 0 chr17 12180622 12180928 -77323625 + AluSx SINE Alu 1 307 -5 591 203 7 28 chr17 12181260 12181403 -77323150 - MIR3 SINE MIR -19 189 50 279 267 20 30 chr17 12184393 12184494 -77320059 + CT-rich Low_complexity Low_complexity 2 101 0 423 345 82 0 chr17 12185201 12185395 -77319158 + MIR SINE MIR 51 260 -2 200 281 34 45 chr17 12186277 12186366 -77318187 + MIR3 SINE MIR 3 90 -118 1039 161 144 69 chr17 12186366 12186657 -77317896 - MLT1A1 LTR MaLR 0 365 53 357 109 0 0 chr17 12186714 12186769 -77317784 + (TCCCC)n Simple_repeat Simple_repeat 5 59 0 455 316 123 8 chr17 12186900 12187153 -77317400 - L2 LINE L2 -1 3312 3031 194 235 274 20 chr17 12187556 12187658 -77316895 - MIR SINE MIR -50 212 85 195 273 15 30 chr17 12188355 12188421 -77316132 + L2 LINE L2 2989 3053 -219 195 343 49 20 chr17 12188818 12188920 -77315633 + MIR3 SINE MIR 9 113 -95 555 279 69 25 chr17 12189054 12189258 -77315295 + MIR SINE MIR 14 226 -36 2951 58 3 11 chr17 12189262 12189642 -77314911 + L1PA8 LINE L1 5793 6169 -3 244 164 66 16 chr17 12189684 12189745 -77314808 + L1M4 LINE L1 5725 5788 -396 276 271 193 29 chr17 12190125 12190265 -77314288 + MIR3 SINE MIR 30 192 -16 21 57 0 0 chr17 12190743 12190778 -77313775 + AT_rich Low_complexity Low_complexity 1 35 0 441 265 193 16 chr17 12190868 12191246 -77313307 - L1ME4a LINE L1 -122 5999 5555 407 186 25 8 chr17 12191346 12191464 -77313089 + (TA)n Simple_repeat Simple_repeat 1 120 0 377 244 57 8 chr17 12191469 12191592 -77312961 - L1P4 LINE L1 -707 5467 5339 474 169 0 0 chr17 12193364 12193447 -77311106 + AluS SINE Alu 228 310 -2 547 69 46 0 chr17 12193458 12193545 -77311008 + GA-rich Low_complexity Low_complexity 3 93 0 820 244 67 8 chr17 12193608 12193862 -77310691 - LTR16A1 LTR ERVL 0 457 189 360 269 50 25 chr17 12194675 12194794 -77309759 + MER63 DNA MER1_type 1 748 -88 277 272 12 0 chr17 12194798 12194879 -77309674 + MER63 DNA MER1_type 978 1059 -2 2648 103 69 2 chr17 12195288 12195694 -77308859 - MER4C LTR ERV1 -21 444 12 1728 150 4 11 chr17 12195701 12195981 -77308572 - AluJo SINE Alu -34 278 1 264 278 191 41 chr17 12196292 12196486 -77308067 + MIR SINE MIR 14 236 -26 345 82 0 0 chr17 12196621 12196670 -77307883 + (CA)n Simple_repeat Simple_repeat 2 50 0 1532 294 145 49 chr17 12196689 12196801 -77307752 + L2 LINE L2 1196 1296 -2018 597 210 27 75 chr17 12196801 12196987 -77307566 + MER5B DNA MER1_type 1 177 -1 1532 294 145 49 chr17 12196987 12197379 -77307174 + L2 LINE L2 1296 1649 -1665 2374 197 13 6 chr17 12197379 12197852 -77306701 + L1MB3 LINE L1 5706 6181 -2 1532 294 145 49 chr17 12197852 12198661 -77305892 + L2 LINE L2 1649 2637 -677 581 274 73 51 chr17 12198860 12199214 -77305339 + L2 LINE L2 2949 3310 -3 1766 143 6 73 chr17 12199681 12199995 -77304558 + AluJo SINE Alu 4 296 -16 22 0 0 54 chr17 12200114 12200131 -77304422 + AT_rich Low_complexity Low_complexity 1 17 -18 2503 81 0 0 chr17 12200131 12200441 -77304112 - AluY SINE Alu -1 310 1 22 0 0 54 chr17 12200441 12200460 -77304093 + AT_rich Low_complexity Low_complexity 17 35 0 929 172 12 24 chr17 12200463 12200632 -77303921 - AluJ SINE Alu -33 279 113 399 102 0 0 chr17 12200837 12200896 -77303657 - AluJ SINE Alu -197 105 47 2502 86 0 3 chr17 12201900 12202291 -77302262 + AluSp SINE Alu 1 390 0 2388 99 3 6 chr17 12202661 12202975 -77301578 - AluSq SINE Alu 0 313 1 2461 84 0 0 chr17 12203529 12203838 -77300715 + AluSc SINE Alu 1 309 0 1649 168 48 20 chr17 12203910 12204202 -77300351 + AluJb SINE Alu 1 300 -12 504 128 8 96 chr17 12204976 12205057 -77299496 - L1MA4A LINE L1 -5 6298 6230 504 0 0 0 chr17 12205057 12205113 -77299440 + (TA)n Simple_repeat Simple_repeat 2 57 0 504 128 8 96 chr17 12205113 12205156 -77299397 - L1MA4A LINE L1 -73 6230 6185 881 237 56 19 chr17 12205792 12206007 -77298546 + MER58A DNA MER1_type 2 224 0 23 0 0 0 chr17 12206376 12206399 -77298154 + AT_rich Low_complexity Low_complexity 1 23 0 2356 92 0 19 chr17 12207087 12207403 -77297150 + AluSg SINE Alu 1 310 0 234 281 96 15 chr17 12208308 12208443 -77296110 + L1ME LINE L1 5629 5774 -347 513 32 0 0 chr17 12209388 12209451 -77295102 + (TG)n Simple_repeat Simple_repeat 2 64 0 549 239 46 0 chr17 12209696 12209826 -77294727 + MIR SINE MIR 79 214 -48 1430 147 12 4 chr17 12209911 12210163 -77294390 + L1MA7 LINE L1 6038 6291 0 217 267 0 0 chr17 12210650 12210695 -77293858 + (TG)n Simple_repeat Simple_repeat 2 46 0 225 0 0 0 chr17 12210916 12210941 -77293612 + (T)n Simple_repeat Simple_repeat 1 25 0 2473 69 3 0 chr17 12211764 12212067 -77292486 - AluY SINE Alu -7 304 1 2042 104 3 92 chr17 12212146 12212484 -77292069 - AluSq SINE Alu -5 308 1 234 366 37 25 chr17 12212769 12212930 -77291623 - L2 LINE L2 -162 3110 2948 2204 108 0 19 chr17 12213024 12213338 -77291215 + AluSc SINE Alu 1 308 -1 300 292 200 31 chr17 12213840 12214035 -77290518 + MIR SINE MIR 1 228 -34 248 0 31 0 chr17 12214062 12214094 -77290459 + (TG)n Simple_repeat Simple_repeat 2 34 0 414 181 0 0 chr17 12214094 12214199 -77290354 + (TA)n Simple_repeat Simple_repeat 1 105 0 2112 103 4 11 chr17 12216226 12216537 -77288016 - AluSg SINE Alu 0 309 1 298 299 86 46 chr17 12216759 12216933 -77287620 + MER5A DNA MER1_type 9 189 0 2138 117 0 3 chr17 12217092 12217418 -77287135 - AluSx SINE Alu 0 325 1 207 297 0 0 chr17 12217609 12217673 -77286880 + (CA)n Simple_repeat Simple_repeat 1 64 0 928 318 98 13 chr17 12218357 12218829 -77285724 + LTR33 LTR ERVL 1 512 -9 356 226 96 17 chr17 12218853 12218968 -77285585 + MER103 DNA DNA 34 157 -9 405 239 99 0 chr17 12219152 12219279 -77285274 + MIR3 SINE MIR 9 160 -48 573 266 56 48 chr17 12220081 12220333 -77284220 + L1M4 LINE L1 29 282 -6577 882 226 42 49 chr17 12220411 12220698 -77283855 + L1M4 LINE L1 2222 2506 -4632 281 245 133 40 chr17 12221453 12221604 -77282949 + L1M4 LINE L1 2660 2824 -4314 1653 228 23 56 chr17 12221609 12222165 -77282388 + L1M4 LINE L1 5276 5813 -1144 4893 182 36 33 chr17 12222172 12222855 -77281698 + L1MD1 LINE L1 4922 5603 -639 2398 86 0 3 chr17 12222855 12223159 -77281394 + AluY SINE Alu 1 303 -8 4893 182 36 33 chr17 12223159 12223767 -77280786 + L1MD1 LINE L1 5603 6208 -34 1451 278 108 25 chr17 12223768 12224289 -77280264 - MLT1G1 LTR MaLR -28 567 4 792 316 41 49 chr17 12224653 12224815 -77279738 + L1M4b LINE L1 3045 3207 -3750 2202 103 3 29 chr17 12224815 12225126 -77279427 + AluSx SINE Alu 1 303 -9 792 316 41 49 chr17 12225126 12225998 -77278555 + L1M4b LINE L1 3207 4070 -2887 578 316 19 5 chr17 12226205 12226411 -77278142 + MIR SINE MIR 15 223 -39 213 39 0 0 chr17 12226617 12226643 -77277910 + (TA)n Simple_repeat Simple_repeat 2 27 0 238 287 11 23 chr17 12227161 12227248 -77277305 - L1MC/D LINE L1 -2058 5750 5665 268 196 0 0 chr17 12227293 12227339 -77277214 + L1MB8 LINE L1 5668 5713 -2095 2231 111 0 7 chr17 12228234 12228531 -77276022 - AluSg SINE Alu -15 295 1 188 240 20 0 chr17 12229502 12229552 -77275001 - MIR SINE MIR -131 77 27 472 182 30 10 chr17 12235618 12235717 -77268836 + MER5A DNA MER1_type 9 109 -80 196 240 281 10 chr17 12235646 12235742 -77268811 - MER5A DNA MER1_type -26 163 42 * 201 214 14 43 chr17 12236483 12236553 -77268000 + (CGGGG)n Simple_repeat Simple_repeat 5 72 0 270 81 0 0 chr17 12239087 12239124 -77265429 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 518 259 99 12 chr17 12240758 12240920 -77263633 + MIR3 SINE MIR 19 194 -14 498 271 63 24 chr17 12242307 12242514 -77262039 + L1MB8 LINE L1 5955 6169 -9 351 20 0 59 chr17 12242602 12242653 -77261900 - MADE1 DNA Mariner -1 79 32 399 91 0 0 chr17 12242671 12242726 -77261827 - MADE1 DNA Mariner -25 55 1 204 40 0 0 chr17 12243402 12243427 -77261126 + (CA)n Simple_repeat Simple_repeat 2 26 0 274 175 88 25 chr17 12244244 12244324 -77260229 + MIR3 SINE MIR 111 195 -13 425 345 0 24 chr17 12244466 12244631 -77259922 + MIR3 SINE MIR 23 183 -25 845 228 11 0 chr17 12245305 12245489 -77259064 + MER5A DNA MER1_type 1 186 -3 2360 69 0 20 chr17 12245720 12246023 -77258530 + AluSc SINE Alu 1 297 -12 728 306 73 38 chr17 12246321 12246716 -77257837 - MLT1I LTR MaLR 0 409 1 1598 195 27 27 chr17 12247967 12248336 -77256217 - Charlie1b DNA MER1_type -1 522 154 376 281 8 16 chr17 12249140 12249261 -77255292 - MIR SINE MIR 0 262 143 2372 86 0 0 chr17 12249560 12249852 -77254701 + AluSx SINE Alu 1 292 -20 200 227 0 0 chr17 12250015 12250059 -77254494 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1121 238 33 0 chr17 12250254 12250464 -77254089 + Tigger5 DNA MER2_type 2 218 -2105 1599 144 8 8 chr17 12250475 12250738 -77253815 + Tigger5 DNA MER2_type 2061 2323 0 2341 96 7 0 chr17 12251367 12251668 -77252885 + AluSp SINE Alu 3 305 -8 4076 105 2 2 chr17 12252990 12253544 -77251009 + MER41A LTR ERV1 1 554 0 560 249 75 0 chr17 12254474 12254647 -77249906 + MIR SINE MIR 69 254 -8 198 0 0 0 chr17 12254839 12254861 -77249692 + (TA)n Simple_repeat Simple_repeat 2 23 0 320 222 0 0 chr17 12254861 12254924 -77249629 - L1MEc LINE L1 -6298 98 36 649 211 8 0 chr17 12255009 12255137 -77249416 + L1MEc LINE L1 109 237 -6159 589 132 0 19 chr17 12255138 12255244 -77249309 + L1ME1 LINE L1 5191 5294 -852 1836 157 0 20 chr17 12255247 12255547 -77249006 + AluJo SINE Alu 1 294 -18 221 234 26 13 chr17 12255642 12255719 -77248834 + A-rich Low_complexity Low_complexity 2 79 0 2319 200 69 95 chr17 12255723 12256167 -77248386 + L1ME1 LINE L1 5314 5725 -441 930 138 0 0 chr17 12256167 12256341 -77248212 + (TA)n Simple_repeat Simple_repeat 1 174 0 2319 200 69 95 chr17 12256341 12256767 -77247786 + L1ME1 LINE L1 5725 6161 -5 411 21 0 0 chr17 12256884 12256932 -77247621 + (TA)n Simple_repeat Simple_repeat 2 49 0 351 0 0 0 chr17 12257029 12257068 -77247485 + (TA)n Simple_repeat Simple_repeat 1 39 0 523 271 151 9 chr17 12257448 12257666 -77246887 + MIR SINE MIR 1 249 -13 1480 227 106 31 chr17 12258199 12258586 -77245967 - MLT2B1 LTR ERVL -104 416 1 549 196 0 6 chr17 12259292 12259435 -77245118 + MER89 LTR ERV1 1 241 -318 1856 210 31 3 chr17 12259435 12259788 -77244765 + MLT2B2 LTR ERVL 1 363 -152 713 169 0 24 chr17 12259766 12259890 -77244663 - MLT1A1 LTR MaLR -34 331 211 * 1758 156 0 0 chr17 12259892 12260149 -77244404 + ERVL LTR ERVL 4630 4886 -878 766 217 6 19 chr17 12260149 12260300 -77244253 - MLT2B3 LTR ERVL -166 388 240 5568 188 80 42 chr17 12260300 12261609 -77242944 - MER52A LTR ERV1 0 1755 319 234 246 31 0 chr17 12262174 12262239 -77242314 - MER52A LTR ERV1 -1688 67 1 1300 183 8 8 chr17 12262252 12262492 -77242061 - MLT2B1 LTR ERVL -280 240 1 1710 155 28 34 chr17 12262493 12262816 -77241737 + MER89 LTR ERV1 238 558 -1 749 199 39 11 chr17 12262979 12263160 -77241393 - MER5A DNA MER1_type -3 186 1 488 306 12 12 chr17 12263631 12263791 -77240762 - MER5B DNA MER1_type -16 162 3 1046 288 52 57 chr17 12264682 12264802 -77239751 - MLT1K LTR MaLR -17 571 452 2105 112 35 0 chr17 12264802 12265089 -77239464 + AluY SINE Alu 1 297 -14 1046 288 52 57 chr17 12265089 12265510 -77239043 - MLT1K LTR MaLR -136 452 33 1028 234 9 22 chr17 12265623 12265849 -77238704 - MER58A DNA MER1_type -1 223 1 1447 214 148 30 chr17 12266109 12266609 -77237944 + MER89 LTR ERV1 1 559 0 254 171 24 110 chr17 12266670 12266712 -77237841 + MLT1B LTR MaLR 11 44 -346 4082 177 40 25 chr17 12266712 12266840 -77237713 + LTR39 LTR ERV1 3 128 -655 2370 91 0 3 chr17 12266840 12267137 -77237416 + AluY SINE Alu 1 296 -15 4082 177 40 25 chr17 12267137 12267777 -77236776 + LTR39 LTR ERV1 128 783 0 254 171 24 110 chr17 12267777 12267816 -77236737 + MLT1B LTR MaLR 44 85 -305 1460 186 11 11 chr17 12267817 12268097 -77236456 - LTR4 LTR ERV1 0 596 317 1550 183 9 56 chr17 12268379 12268702 -77235851 + MLT1B LTR MaLR 83 390 0 508 221 39 44 chr17 12268885 12269066 -77235487 + MER53 DNA DNA 1 180 -9 452 216 78 9 chr17 12269277 12269393 -77235160 + MLT2E LTR ERVL 505 628 0 2094 124 72 26 chr17 12269448 12269796 -77234757 - THE1B LTR MaLR 0 364 1 2568 158 209 24 chr17 12269888 12270502 -77234051 - LTR8A LTR ERV1 0 727 1 265 236 0 0 chr17 12271703 12271758 -77232795 + HAL1b LINE L1 378 432 -916 1414 149 4 26 chr17 12271768 12271996 -77232557 + AluSx SINE Alu 1 223 -89 4303 117 11 3 chr17 12272286 12272893 -77231660 + LTR9 LTR ERV1 1 612 0 470 280 31 34 chr17 12273118 12273387 -77231166 - L1ME2 LINE L1 -219 5945 5676 2831 191 11 15 chr17 12273935 12274479 -77230074 + MLT1F LTR MaLR 1 542 0 1707 173 14 4 chr17 12275624 12275902 -77228651 + AluJo SINE Alu 7 287 -25 728 169 174 0 chr17 12276017 12276195 -77228358 - MER3 DNA MER1_type 0 209 1 182 351 79 12 chr17 12278447 12278612 -77225941 - L2 LINE L2 -208 3064 2889 498 223 28 2 chr17 12278686 12278824 -77225729 + L1ME1 LINE L1 5689 5832 -334 865 158 0 0 chr17 12278831 12278958 -77225595 - FLAM_C SINE Alu -6 127 1 1757 193 76 36 chr17 12278980 12279430 -77225123 - L1MB1 LINE L1 0 6168 5701 312 211 0 0 chr17 12279499 12279570 -77224983 + GA-rich Low_complexity Low_complexity 4 74 0 5160 267 103 33 chr17 12280531 12282201 -77222352 + L2 LINE L2 297 2254 -1059 2226 111 0 3 chr17 12282201 12282498 -77222055 - AluSg SINE Alu -14 296 1 5160 267 103 33 chr17 12282498 12283638 -77220915 + L2 LINE L2 2254 3313 0 333 0 0 0 chr17 12283654 12283691 -77220862 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1747 140 11 21 chr17 12283693 12283978 -77220575 - AluJo SINE Alu -30 282 1 247 337 59 10 chr17 12284085 12284186 -77220367 - L2 LINE L2 0 3272 3167 2010 84 4 8 chr17 12284615 12284878 -77219675 - AluSc SINE Alu -1 308 47 436 314 157 21 chr17 12284938 12285174 -77219379 - MLT1K LTR MaLR -113 475 208 2357 219 19 27 chr17 12285363 12285734 -77218819 - LTR53 LTR ERVL -3 516 149 2340 106 0 10 chr17 12285734 12286046 -77218507 - AluSx SINE Alu -3 309 1 2357 219 19 27 chr17 12286046 12286194 -77218359 - LTR53 LTR ERVL -370 149 1 350 232 150 72 chr17 12287040 12287247 -77217306 - L1MEd LINE L1 -5838 281 59 525 360 23 13 chr17 12287964 12288264 -77216289 + L3 LINE CR1 1212 1514 -63 213 146 24 0 chr17 12288526 12288567 -77215986 + T-rich Low_complexity Low_complexity 2 43 0 181 289 0 0 chr17 12290156 12290201 -77214352 + MIR SINE MIR 81 125 -83 1948 108 56 14 chr17 12291516 12291802 -77212751 + AluSc SINE Alu 1 298 -11 555 237 23 28 chr17 12291830 12292007 -77212546 - MER113 DNA MER1_type? -337 184 9 1506 178 18 96 chr17 12292734 12293128 -77211425 - MLT1A1 LTR MaLR -2 363 1 563 194 45 65 chr17 12293268 12293423 -77211130 - MER63 DNA MER1_type -58 778 1 2149 122 0 13 chr17 12293479 12293782 -77210771 + AluSx SINE Alu 1 299 -13 323 179 0 51 chr17 12294860 12294938 -77209615 - L1PA10 LINE L1 -2 6166 6093 515 88 0 2 chr17 12294938 12295010 -77209543 + L1PA6 LINE L1 5917 5980 -174 290 305 105 37 chr17 12295060 12295250 -77209303 - MIR SINE MIR -7 255 53 310 216 22 147 chr17 12296100 12296331 -77208222 + MIR SINE MIR 2 203 -59 2594 57 0 0 chr17 12296482 12296778 -77207775 + AluSc SINE Alu 1 296 -13 262 279 103 67 chr17 12296916 12297081 -77207472 - MIR SINE MIR -57 205 35 467 213 40 47 chr17 12297114 12297264 -77207289 - MLT1K LTR MaLR -2 586 438 255 261 115 48 chr17 12297438 12297603 -77206950 - MLT1K LTR MaLR -291 297 122 1730 149 10 36 chr17 12298102 12298403 -77206150 + AluJb SINE Alu 1 293 -19 2241 113 3 7 chr17 12298407 12298709 -77205844 + AluSg SINE Alu 1 301 -9 2384 90 0 0 chr17 12299304 12299605 -77204948 + AluSg SINE Alu 1 301 -9 647 88 0 0 chr17 12299521 12299612 -77204941 + Alu SINE Alu 220 310 -2 215 246 33 0 chr17 12299764 12299825 -77204728 - L2 LINE L2 -9 3304 3242 2387 73 3 20 chr17 12299976 12300277 -77204276 + AluSg SINE Alu 1 296 -14 2418 106 0 0 chr17 12301139 12301450 -77203103 - AluSp SINE Alu -2 311 1 232 254 69 95 chr17 12302377 12302403 -77202150 - MIR SINE MIR -78 184 159 2262 112 0 0 chr17 12302403 12302708 -77201845 + AluSx SINE Alu 1 305 -7 232 254 69 95 chr17 12302708 12302870 -77201683 - MIR SINE MIR -103 159 1 233 143 0 20 chr17 12302890 12302939 -77201614 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 189 0 0 0 chr17 12303253 12303274 -77201279 + (CA)n Simple_repeat Simple_repeat 1 21 0 421 254 12 103 chr17 12304148 12304313 -77200240 - MIR SINE MIR -108 154 5 334 320 143 28 chr17 12304599 12304728 -77199825 - L3 LINE CR1 -52 1525 1412 303 200 40 0 chr17 12304728 12304803 -77199750 - MER116 DNA Mariner 0 80 3 334 320 143 28 chr17 12304803 12305029 -77199524 - L3 LINE CR1 -165 1412 1129 213 266 191 62 chr17 12305064 12305305 -77199248 - L2 LINE L2 0 3313 3042 240 313 73 13 chr17 12306570 12306720 -77197833 - MIR SINE MIR -27 235 77 2400 31 14 0 chr17 12307278 12307564 -77196989 - L1PA4 LINE L1 0 6155 5866 1374 151 17 0 chr17 12308090 12308329 -77196224 + L1MA9 LINE L1 5867 6109 -203 2267 79 0 0 chr17 12308329 12308627 -77195926 + AluSc SINE Alu 1 298 0 2018 65 0 15 chr17 12308646 12308908 -77195645 + L1PA8 LINE L1 5915 6172 0 1405 98 0 45 chr17 12308909 12309133 -77195420 + L1MA9 LINE L1 6099 6312 0 1581 104 19 5 chr17 12309619 12309831 -77194722 + AluSg/x SINE Alu 80 294 -16 449 143 66 0 chr17 12310143 12310234 -77194319 - MER53 DNA DNA -91 98 2 459 274 162 19 chr17 12311409 12311675 -77192878 + L3 LINE CR1 1215 1518 -59 324 266 31 47 chr17 12313252 12313335 -77191218 - MER58C DNA MER1_type -2220 200 118 1937 137 3 47 chr17 12313335 12313657 -77190896 - AluSx SINE Alu -4 308 1 324 266 31 47 chr17 12313657 12313701 -77190852 - MER58C DNA MER1_type -2302 118 75 2210 85 7 27 chr17 12314157 12314480 -77190073 - AluSg1 SINE Alu 0 317 1 195 156 0 0 chr17 12315471 12315503 -77189050 - MIR SINE MIR -11 251 220 943 176 6 0 chr17 12315628 12315793 -77188760 + FRAM SINE Alu 1 166 0 241 208 0 19 chr17 12315823 12315876 -77188677 + L2 LINE L2 3259 3310 -3 1892 204 86 91 chr17 12316508 12316568 -77187985 - MLT1E2 LTR MaLR -23 601 542 2116 123 0 7 chr17 12316568 12316861 -77187692 - AluSg SINE Alu -19 291 1 1892 204 86 91 chr17 12316861 12317403 -77187150 - MLT1E2 LTR MaLR -82 542 3 236 293 13 0 chr17 12317506 12317581 -77186972 - Charlie8 DNA MER1_type -2226 191 116 288 289 8 66 chr17 12317716 12317837 -77186716 - MIR SINE MIR -60 202 89 304 148 30 178 chr17 12317838 12317904 -77186649 + MER5B DNA MER1_type 2 40 -138 1867 137 30 4 chr17 12317904 12318175 -77186378 + AluSq SINE Alu 1 278 -35 304 148 30 178 chr17 12318175 12318243 -77186310 + MER5B DNA MER1_type 40 116 -62 328 286 41 20 chr17 12318953 12319100 -77185453 + MER5A DNA MER1_type 36 185 -4 295 298 8 41 chr17 12319651 12319772 -77184781 - MIR SINE MIR -62 146 30 764 255 150 31 chr17 12319932 12320284 -77184269 - LTR16A LTR ERVL 0 450 59 2259 72 3 46 chr17 12320433 12320738 -77183815 + AluSq SINE Alu 1 292 -21 22 0 0 0 chr17 12321600 12321622 -77182931 + AT_rich Low_complexity Low_complexity 1 22 0 654 190 190 0 chr17 12321677 12321814 -77182739 - MER7C DNA MER2_type 0 612 450 2265 189 39 11 chr17 12321962 12322423 -77182130 - MER7C DNA MER2_type -128 474 1 264 352 28 14 chr17 12323515 12323660 -77180893 + L2 LINE L2 2521 2667 -647 2520 84 0 0 chr17 12324044 12324355 -77180198 - AluY SINE Alu 0 311 1 926 81 0 0 chr17 12324362 12324473 -77180080 - AluSp SINE Alu -180 133 23 2313 100 3 0 chr17 12324808 12325107 -77179446 + AluSp SINE Alu 1 300 -13 956 92 0 0 chr17 12325454 12325574 -77178979 - AluSp/q SINE Alu -18 295 176 189 343 30 40 chr17 12325802 12325901 -77178652 - L2 LINE L2 -31 3241 3144 840 182 144 0 chr17 12325990 12326177 -77178376 + MER20 DNA MER1_type 2 215 -4 2371 99 0 3 chr17 12327020 12327322 -77177231 + AluSp SINE Alu 1 301 -12 608 301 69 19 chr17 12327436 12327496 -77177057 - L1ME LINE L1 -343 5778 5722 509 194 125 19 chr17 12327496 12327656 -77176897 + MER104 DNA MER2_type 4 180 0 608 301 69 19 chr17 12327656 12328048 -77176505 - L1ME LINE L1 -399 5722 5282 259 264 83 42 chr17 12329962 12330106 -77174447 - L2 LINE L2 -87 3226 3077 2695 46 0 0 chr17 12330457 12330761 -77173792 - AluY SINE Alu -7 304 1 195 204 0 0 chr17 12332067 12332111 -77172442 + (TCCA)n Simple_repeat Simple_repeat 3 46 0 2811 13 0 3 chr17 12332250 12332555 -77171998 + AluY SINE Alu 1 304 -7 195 136 51 0 chr17 12332562 12332621 -77171932 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 478 272 97 67 chr17 12332855 12333050 -77171503 - MIR SINE MIR 0 262 62 2157 59 4 0 chr17 12333256 12333528 -77171025 - L1PB1 LINE L1 -86 6065 5793 306 0 0 0 chr17 12333528 12333562 -77170991 + (TG)n Simple_repeat Simple_repeat 2 35 0 213 255 20 0 chr17 12333778 12333829 -77170724 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 1796 63 0 0 chr17 12333830 12334051 -77170502 + L1PB1 LINE L1 5783 6003 -148 267 189 0 0 chr17 12334051 12334104 -77170449 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 3705 82 4 4 chr17 12334104 12334613 -77169940 - L1PB1 LINE L1 -361 5790 5282 4658 260 64 20 chr17 12334763 12337472 -77167081 - L1ME2 LINE L1 0 6233 3406 3301 103 50 95 chr17 12337478 12338099 -77166454 + LTR14B LTR ERVK 16 608 0 3119 252 55 55 chr17 12338106 12338492 -77166061 - L1ME2 LINE L1 -2820 3395 3010 1963 176 0 0 chr17 12338492 12338799 -77165754 - AluSx SINE Alu -5 307 1 3119 252 55 55 chr17 12338799 12340592 -77163961 - L1ME2 LINE L1 -3205 3010 1256 340 246 50 68 chr17 12340704 12340924 -77163629 - L1ME2 LINE L1 -5504 892 677 2870 13 0 0 chr17 12340924 12341231 -77163322 - AluYa5 SINE Alu -4 307 1 239 342 46 46 chr17 12341486 12341682 -77162871 - L1ME2 LINE L1 -6061 335 140 291 28 0 0 chr17 12342449 12342485 -77162068 + (GA)n Simple_repeat Simple_repeat 1 36 0 229 191 24 0 chr17 12344929 12344971 -77159582 + MLT1J2 LTR MaLR 254 296 -154 416 251 67 130 chr17 12345823 12346138 -77158415 - MLT1J2 LTR MaLR -154 296 2 2293 116 0 0 chr17 12346561 12346863 -77157690 + AluSg SINE Alu 1 302 -8 2220 115 3 0 chr17 12348883 12349179 -77155374 - AluSp SINE Alu -16 297 1 2235 196 34 69 chr17 12349383 12349935 -77154618 - MER74A LTR ERVL 0 558 26 219 265 20 82 chr17 12350061 12350159 -77154394 + MIR3 SINE MIR 111 202 -6 24 32 0 0 chr17 12350217 12350248 -77154305 + AT_rich Low_complexity Low_complexity 1 31 0 2243 293 174 30 chr17 12350298 12351818 -77152735 + L2 LINE L2 95 1833 -1481 253 157 0 57 chr17 12352019 12352089 -77152464 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 1151 273 88 47 chr17 12352119 12353005 -77151548 - L1ME3 LINE L1 -230 5915 4994 4565 281 87 20 chr17 12353043 12354449 -77150104 - L1ME3 LINE L1 -1381 4748 3438 2434 87 3 3 chr17 12354449 12354759 -77149794 - AluSp SINE Alu -3 310 1 4565 281 87 20 chr17 12354759 12355944 -77148609 - L1ME3 LINE L1 -2691 3438 2022 1853 110 0 8 chr17 12356212 12356493 -77148060 - AluSg SINE Alu 0 318 40 612 266 78 56 chr17 12356555 12357293 -77147260 - L1ME3 LINE L1 -4677 1633 816 349 228 61 26 chr17 12357643 12357757 -77146796 - L1MC4a LINE L1 -211 7597 7480 711 297 22 5 chr17 12359991 12360213 -77144340 + MIR SINE MIR 11 236 -26 280 71 0 24 chr17 12360255 12360297 -77144256 - MER5B DNA MER1_type -120 58 18 833 183 0 7 chr17 12360440 12360577 -77143976 - FRAM SINE Alu -25 151 16 284 243 122 0 chr17 12360650 12360724 -77143829 - L2 LINE L2 -2 3270 3188 726 203 25 19 chr17 12360821 12360979 -77143574 + MER5B DNA MER1_type 18 176 -2 522 295 123 4 chr17 12361049 12361276 -77143277 - MARNA DNA Mariner -89 497 244 2151 108 0 0 chr17 12361344 12361648 -77142905 - AluSg SINE Alu 0 304 1 229 353 101 40 chr17 12363596 12363944 -77140609 - L2 LINE L2 -562 2752 2384 2340 86 0 0 chr17 12363978 12364269 -77140284 - AluY SINE Alu -9 302 12 213 214 0 0 chr17 12365709 12365751 -77138802 + (CA)n Simple_repeat Simple_repeat 2 43 0 1618 129 4 4 chr17 12366030 12366263 -77138290 + AluSc SINE Alu 1 233 -76 543 246 106 0 chr17 12366773 12366915 -77137638 - MER5B DNA MER1_type -21 157 1 2358 95 3 0 chr17 12366992 12367298 -77137255 + AluSg SINE Alu 1 307 -3 2445 81 3 0 chr17 12369970 12370277 -77134276 - AluSg SINE Alu -2 308 1 557 252 23 2 chr17 12370303 12370462 -77134091 + MIR SINE MIR 3 169 -63 1660 171 67 131 chr17 12370756 12371098 -77133455 + Charlie1b DNA MER1_type 13 375 -2386 2105 93 0 31 chr17 12371098 12371389 -77133164 - AluSg SINE Alu -28 282 1 1660 171 67 131 chr17 12371389 12371414 -77133139 + Charlie1b DNA MER1_type 375 400 -2361 2086 109 0 44 chr17 12371414 12371735 -77132818 - AluSx SINE Alu -5 307 1 1660 171 67 131 chr17 12371735 12371887 -77132666 + Charlie1b DNA MER1_type 400 500 -23 492 194 0 0 chr17 12372778 12372907 -77131646 + CT-rich Low_complexity Low_complexity 1 129 0 1903 111 11 11 chr17 12372907 12373364 -77131189 - AluSg SINE Alu 0 457 1 250 295 101 36 chr17 12373651 12373790 -77130763 + MIR SINE MIR 50 197 -65 970 204 44 0 chr17 12373820 12374001 -77130552 - MER5A DNA MER1_type 0 189 1 2126 238 108 35 chr17 12374022 12374747 -77129806 - L1MC4a LINE L1 -1505 6303 5520 1685 146 56 8 chr17 12375055 12375323 -77129230 - AluJo SINE Alu -21 291 11 396 324 123 72 chr17 12375331 12375967 -77128586 - HAL1b LINE L1 -676 672 5 39 80 0 0 chr17 12376160 12376248 -77128305 + AT_rich Low_complexity Low_complexity 1 88 0 300 106 25 62 chr17 12376297 12376458 -77128095 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 237 128 81 12 chr17 12376496 12376582 -77127971 + (TA)n Simple_repeat Simple_repeat 2 93 0 2423 87 0 0 chr17 12377145 12377445 -77127108 + AluSg SINE Alu 1 300 -10 349 335 57 78 chr17 12379695 12379845 -77124708 - L2 LINE L2 -25 3247 3095 2165 115 0 10 chr17 12379845 12380158 -77124395 - AluSx SINE Alu -2 310 1 349 335 57 78 chr17 12380158 12380377 -77124176 - L2 LINE L2 -177 3095 2886 385 311 107 43 chr17 12380593 12380987 -77123566 - L2 LINE L2 -1076 2238 1806 2551 61 7 3 chr17 12380987 12381297 -77123256 + AluY SINE Alu 1 311 0 385 311 107 43 chr17 12381297 12381390 -77123163 - L2 LINE L2 -1508 1806 1720 2249 73 4 0 chr17 12382759 12383032 -77121521 - AluSp SINE Alu -12 301 28 336 311 91 15 chr17 12383607 12383739 -77120814 + MIR SINE MIR 47 188 -74 1789 139 43 7 chr17 12383748 12384050 -77120503 + L1MA4A LINE L1 5985 6297 -6 232 340 110 10 chr17 12384530 12384630 -77119923 - L2 LINE L2 -41 3231 3122 187 286 0 0 chr17 12384776 12384832 -77119721 - L2 LINE L2 -222 3050 2995 475 311 144 32 chr17 12385922 12386136 -77118417 + L2 LINE L2 2859 3048 -265 504 0 0 0 chr17 12386136 12386192 -77118361 + (CA)n Simple_repeat Simple_repeat 1 56 0 378 0 0 0 chr17 12386191 12386233 -77118320 + (GA)n Simple_repeat Simple_repeat 2 43 0 * 475 311 144 32 chr17 12386192 12386427 -77118126 + L2 LINE L2 3048 3313 0 396 333 68 0 chr17 12386983 12387115 -77117438 + L2 LINE L2 3129 3269 -3 730 259 60 14 chr17 12388296 12388578 -77115975 - L1ME4a LINE L1 -198 5923 5629 387 337 84 15 chr17 12388627 12388888 -77115665 - L1ME4a LINE L1 -811 5548 5270 634 309 140 38 chr17 12389011 12389481 -77115072 - MLT1K LTR MaLR -4 584 67 987 113 0 0 chr17 12390041 12390301 -77114252 + (TA)n Simple_repeat Simple_repeat 1 260 0 85 11 0 0 chr17 12390301 12390393 -77114160 + AT_rich Low_complexity Low_complexity 1 92 0 2603 199 51 57 chr17 12390398 12391084 -77113469 - L1MB7 LINE L1 -317 5867 5189 5045 89 5 0 chr17 12391084 12391735 -77112818 - L1PA14 LINE L1 -9 6152 5499 2603 199 51 57 chr17 12391735 12391849 -77112704 - L1MB7 LINE L1 -995 5189 5076 430 330 35 20 chr17 12392067 12392270 -77112283 + L3 LINE CR1 1024 1229 -348 525 335 91 4 chr17 12392352 12392685 -77111868 - L3 LINE CR1 -634 943 534 2112 184 133 7 chr17 12392685 12393254 -77111299 + MLT1E2 LTR MaLR 1 626 0 197 317 190 7 chr17 12393254 12393396 -77111157 - L3 LINE CR1 -1039 538 371 493 291 58 73 chr17 12393497 12393758 -77110795 + L3 LINE CR1 1313 1569 -8 270 302 42 10 chr17 12393941 12394037 -77110516 - MIR SINE MIR -140 122 24 2294 107 10 0 chr17 12394248 12394557 -77109996 - AluSx SINE Alu 0 312 1 281 216 13 90 chr17 12394636 12394725 -77109828 + MIR3 SINE MIR 102 195 -13 887 132 0 83 chr17 12395428 12395572 -77108981 + FLAM_C SINE Alu 2 133 0 2112 195 50 82 chr17 12395813 12396062 -77108491 - L1ME1 LINE L1 -7 6159 5904 1640 192 0 10 chr17 12396062 12396353 -77108200 - AluJb SINE Alu -24 288 1 2112 195 50 82 chr17 12396353 12396698 -77107855 - L1ME1 LINE L1 -262 5904 5584 337 340 70 91 chr17 12396815 12397286 -77107267 - L2 LINE L2 0 3272 2812 232 367 61 0 chr17 12397904 12398002 -77106551 + MIR3 SINE MIR 71 174 -34 1488 62 0 0 chr17 12398425 12398602 -77105951 - L1PA5 LINE L1 0 6154 5978 485 238 14 28 chr17 12399159 12399302 -77105251 - MARNA DNA Mariner -437 149 9 290 73 0 36 chr17 12399436 12399491 -77105062 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 231 36 0 0 chr17 12399787 12399815 -77104738 + (GA)n Simple_repeat Simple_repeat 1 28 0 204 162 40 54 chr17 12399824 12399898 -77104655 + (TAGA)n Simple_repeat Simple_repeat 3 75 0 181 312 50 35 chr17 12401102 12401243 -77103310 + L2 LINE L2 1955 2097 -1217 2450 65 0 19 chr17 12401842 12402149 -77102404 - AluY SINE Alu -10 301 1 3377 104 22 85 chr17 12402174 12402800 -77101753 - L1MA4 LINE L1 -3 6297 5711 3504 133 21 6 chr17 12402882 12403401 -77101152 - MER1A DNA MER1_type 0 527 1 559 243 181 25 chr17 12403437 12403680 -77100873 + L2 LINE L2 3028 3308 -5 2263 117 0 0 chr17 12403765 12404063 -77100490 + AluSx SINE Alu 5 302 -10 320 270 54 9 chr17 12404516 12404627 -77099926 + MER103 DNA DNA 44 159 -7 2479 93 0 3 chr17 12404943 12405254 -77099299 + AluSg SINE Alu 1 310 0 191 30 0 61 chr17 12405497 12405530 -77099023 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 209 308 77 56 chr17 12406906 12407101 -77097452 - MIR SINE MIR -14 248 50 648 243 0 14 chr17 12408423 12408563 -77095990 - MER63 DNA MER1_type -298 764 1 402 250 0 0 chr17 12408563 12408645 -77095908 - Charlie8 DNA MER1_type -2230 187 106 532 206 119 46 chr17 12408708 12408902 -77095651 + MIR SINE MIR 45 252 -10 918 188 0 0 chr17 12408906 12409268 -77095285 + (ATG)n Simple_repeat Simple_repeat 1 362 0 483 259 0 0 chr17 12409299 12409465 -77095088 + (ATG)n Simple_repeat Simple_repeat 2 167 0 5222 26 5 3 chr17 12409575 12410186 -77094367 - L1PA4 LINE L1 0 6155 5544 2359 73 0 32 chr17 12411746 12412062 -77092491 + AluY SINE Alu 1 306 -5 499 131 0 0 chr17 12412316 12412400 -77092153 + MER5A DNA MER1_type 26 109 -80 580 282 0 12 chr17 12412471 12412641 -77091912 - MER5B DNA MER1_type -7 171 4 593 230 8 16 chr17 12413114 12413240 -77091313 - MER5A DNA MER1_type 0 189 65 1051 186 14 41 chr17 12413343 12413563 -77090990 - MER20 DNA MER1_type 0 219 6 245 27 54 0 chr17 12413586 12413623 -77090930 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2117 93 0 0 chr17 12413625 12413895 -77090658 - AluY SINE Alu -25 286 17 319 309 0 11 chr17 12414079 12414173 -77090380 + MIR SINE MIR 13 105 -157 538 172 31 31 chr17 12414185 12414313 -77090240 - L1MD3 LINE L1 -10 7985 7858 454 303 14 0 chr17 12414321 12414466 -77090087 + MIR SINE MIR 116 262 0 601 294 44 24 chr17 12416205 12416457 -77088096 + MIR SINE MIR 6 262 0 2174 138 0 0 chr17 12416558 12416856 -77087697 - AluSx SINE Alu -13 299 2 1093 297 17 26 chr17 12417488 12417906 -77086647 - L1ME4a LINE L1 -251 5870 5457 1208 187 190 13 chr17 12418459 12418769 -77085784 - MLT1A1 LTR MaLR 0 365 1 273 180 37 149 chr17 12418838 12418999 -77085554 - MIR SINE MIR -72 190 48 349 186 186 29 chr17 12419102 12419242 -77085311 - L1ME4a LINE L1 -196 5925 5764 527 127 13 0 chr17 12419557 12419636 -77084917 - MADE1 DNA Mariner 0 80 1 310 111 0 0 chr17 12419764 12419809 -77084744 - MADE1 DNA Mariner -35 45 1 187 333 8 68 chr17 12420040 12420157 -77084396 + MIR SINE MIR 38 147 -61 711 364 30 21 chr17 12421175 12421650 -77082903 + L2 LINE L2 2228 2706 -608 207 359 59 12 chr17 12421771 12421941 -77082612 + L2 LINE L2 2869 3046 -226 2327 92 0 0 chr17 12422010 12422304 -77082249 - AluSg SINE Alu -16 294 1 254 269 71 91 chr17 12423709 12424017 -77080536 + HAL1 LINE L1 845 1146 -1361 832 164 31 13 chr17 12424346 12424505 -77080048 - THE1C LTR MaLR -34 341 180 1080 82 94 13 chr17 12424691 12424850 -77079703 - THE1C LTR MaLR -203 172 1 536 270 147 5 chr17 12424891 12425102 -77079451 + HAL1 LINE L1 1501 1741 -766 378 275 9 18 chr17 12425133 12425242 -77079311 + HAL1 LINE L1 1814 1921 -586 233 354 120 6 chr17 12425394 12425552 -77079001 + L2 LINE L2 3097 3272 0 2093 111 0 74 chr17 12426199 12426523 -77078030 + AluSg SINE Alu 1 300 -10 2441 84 0 0 chr17 12427251 12427550 -77077003 - AluY SINE Alu -2 309 11 441 329 52 41 chr17 12427783 12428245 -77076308 - L1M4 LINE L1 -1127 5019 4553 804 174 0 8 chr17 12428327 12428459 -77076094 + FLAM_C SINE Alu 1 131 -2 377 308 118 21 chr17 12428621 12429364 -77075189 + L1M4 LINE L1 2649 3463 -2683 957 283 86 52 chr17 12429489 12430376 -77074177 + L1M4 LINE L1 3689 4605 -1541 1494 97 0 10 chr17 12430644 12430840 -77073713 + AluSc SINE Alu 84 277 -32 221 56 0 28 chr17 12430840 12430876 -77073677 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2102 78 4 8 chr17 12431581 12431849 -77072704 + AluSq SINE Alu 23 289 -24 6058 106 11 1 chr17 12431988 12433712 -77070841 - L1PA14 LINE L1 -2 6159 4439 258 32 0 0 chr17 12433856 12433887 -77070666 + (CA)n Simple_repeat Simple_repeat 2 32 0 2134 131 33 46 chr17 12433968 12434176 -77070377 - THE1B LTR MaLR 0 364 162 2160 105 24 3 chr17 12434176 12434470 -77070083 + AluY SINE Alu 1 300 -11 2134 131 33 46 chr17 12434470 12434628 -77069925 - THE1B LTR MaLR -202 162 3 1055 157 6 0 chr17 12435234 12435412 -77069141 + L1MB1 LINE L1 5941 6119 -70 326 175 0 0 chr17 12435420 12435477 -77069076 + AluS SINE Alu 1 57 -246 2994 139 4 44 chr17 12437306 12437694 -77066859 - L1PB4 LINE L1 -3 6153 5790 2219 121 0 13 chr17 12437694 12437866 -77066687 - AluSx SINE Alu -7 305 137 2307 81 3 7 chr17 12437866 12438162 -77066391 - AluSc SINE Alu -14 295 1 2219 121 0 13 chr17 12438162 12438295 -77066258 - AluSx SINE Alu -175 137 4 2994 139 4 44 chr17 12438295 12438430 -77066123 - L1PB4 LINE L1 -366 5790 5651 2482 72 0 3 chr17 12438689 12438993 -77065560 - AluSc SINE Alu -5 304 2 2393 63 0 0 chr17 12440947 12441231 -77063322 - AluY SINE Alu -3 308 25 1499 173 49 20 chr17 12442542 12442888 -77061665 - L1MB1 LINE L1 -22 6167 5812 869 168 8 107 chr17 12442891 12443135 -77061418 + L1MA10 LINE L1 6115 6334 0 477 279 25 6 chr17 12443175 12443333 -77061220 + MIR SINE MIR 43 203 -59 209 281 0 18 chr17 12444551 12444608 -77059945 + MIR SINE MIR 17 72 -136 2320 83 0 22 chr17 12444859 12445171 -77059382 + AluSg1 SINE Alu 1 305 -4 323 276 78 0 chr17 12446038 12446154 -77058399 - MIR3 SINE MIR -3 205 81 368 243 87 27 chr17 12447844 12447983 -77056570 - MIR3 SINE MIR -27 181 34 2634 176 80 20 chr17 12448815 12449303 -77055250 + MER63 DNA MER1_type 430 958 -103 2255 106 0 7 chr17 12449303 12449605 -77054948 - AluSq SINE Alu -13 300 1 2634 176 80 20 chr17 12449605 12449677 -77054876 + MER63 DNA MER1_type 958 1024 -37 762 299 23 23 chr17 12449987 12450248 -77054305 - MIR SINE MIR 0 262 2 47 78 0 0 chr17 12450349 12450452 -77054101 + AT_rich Low_complexity Low_complexity 1 103 0 22 0 0 0 chr17 12450483 12450505 -77054048 + AT_rich Low_complexity Low_complexity 1 22 0 898 137 0 0 chr17 12450639 12450770 -77053783 - AluSg/x SINE Alu -12 300 170 435 237 45 42 chr17 12451534 12451713 -77052840 + L1MC4a LINE L1 5784 5963 -158 26 0 0 0 chr17 12451714 12451740 -77052813 + AT_rich Low_complexity Low_complexity 1 26 0 2182 100 0 23 chr17 12452028 12452327 -77052226 + AluSx SINE Alu 5 296 -16 2667 104 28 0 chr17 12452527 12452881 -77051672 - THE1B LTR MaLR 0 364 1 307 273 45 0 chr17 12452909 12452997 -77051556 - L1ME LINE L1 -333 5837 5746 625 233 25 12 chr17 12453020 12453037 -77051516 - L1MA10 LINE L1 -1 6333 6317 1323 204 35 46 chr17 12453037 12453404 -77051149 - L1ME1 LINE L1 -7 6159 5797 217 361 0 0 chr17 12453404 12453476 -77051077 + MIR SINE MIR 191 262 0 2510 43 40 0 chr17 12453769 12454068 -77050485 - AluY SINE Alu 0 311 1 257 335 60 22 chr17 12454473 12454658 -77049895 - MLT1J LTR MaLR -193 318 127 226 329 12 24 chr17 12454716 12454801 -77049752 - MIR SINE MIR -62 146 63 22 0 0 0 chr17 12455592 12455614 -77048939 + AT_rich Low_complexity Low_complexity 1 22 0 424 322 69 23 chr17 12456110 12456371 -77048182 - L2 LINE L2 -123 3190 2918 1066 87 0 27 chr17 12456386 12456536 -77048017 + AluSg/x SINE Alu 167 312 0 588 303 128 16 chr17 12456546 12456866 -77047687 - L2 LINE L2 -410 2904 2549 2255 114 3 0 chr17 12456901 12457200 -77047353 + AluSp SINE Alu 1 300 -13 21 0 0 0 chr17 12458001 12458022 -77046531 + AT_rich Low_complexity Low_complexity 1 21 0 454 227 92 35 chr17 12458832 12458973 -77045580 + MIR SINE MIR 97 245 -17 2425 92 0 0 chr17 12459729 12460035 -77044518 + AluSg SINE Alu 2 307 -3 498 325 257 18 chr17 12460350 12460791 -77043762 + L2 LINE L2 1133 1468 -1846 2178 124 3 7 chr17 12460791 12461097 -77043456 + AluSx SINE Alu 1 305 -7 498 325 257 18 chr17 12461097 12461270 -77043283 + L2 LINE L2 1468 1598 -1716 1603 59 5 30 chr17 12461270 12461472 -77043081 - MER107 DNA MER1_type 0 197 1 498 325 257 18 chr17 12461472 12461690 -77042863 + L2 LINE L2 1598 2165 -1149 483 333 51 5 chr17 12462083 12462278 -77042275 - MIR3 SINE MIR -3 205 2 263 348 50 35 chr17 12463869 12464010 -77040543 - MIR3 SINE MIR -63 145 3 208 356 76 8 chr17 12464205 12464323 -77040230 - MIR SINE MIR -75 187 62 268 157 214 0 chr17 12464416 12464486 -77040067 - MIR SINE MIR -73 189 105 253 299 103 0 chr17 12464537 12464634 -77039919 - L2 LINE L2 -408 2906 2800 526 219 120 49 chr17 12464659 12464842 -77039711 - MIR SINE MIR 0 262 67 2575 157 2 15 chr17 12465220 12465628 -77038925 - MER57A LTR ERV1 0 403 1 2578 97 14 8 chr17 12465825 12466176 -77038377 + THE1A LTR MaLR 3 355 0 688 248 75 75 chr17 12466516 12466823 -77037730 - L1ME3A LINE L1 -4 6235 5929 4293 255 79 37 chr17 12466865 12468973 -77035580 - L1MEc LINE L1 -1945 4270 2111 536 277 83 25 chr17 12469170 12469448 -77035105 - L1MEc LINE L1 -4561 1835 1542 1890 151 3 7 chr17 12469609 12469894 -77034659 + AluSx SINE Alu 4 287 -25 2198 95 28 0 chr17 12470176 12470461 -77034092 + AluSp SINE Alu 1 293 -20 299 299 95 14 chr17 12471023 12471170 -77033383 + MIR SINE MIR 69 227 -35 362 306 89 17 chr17 12471247 12471427 -77033126 - MIR SINE MIR 0 262 70 194 294 24 47 chr17 12471427 12471512 -77033041 - MIR SINE MIR -109 99 17 266 317 40 10 chr17 12472022 12472123 -77032430 - L3 LINE CR1 -5 1572 1469 2389 62 0 55 chr17 12472213 12472538 -77032015 - AluY SINE Alu -4 307 1 487 274 104 52 chr17 12472636 12472906 -77031647 - L3 LINE CR1 -298 1279 996 1790 40 0 0 chr17 12473056 12473257 -77031296 + L1PA5 LINE L1 5948 6148 -6 203 380 37 0 chr17 12473421 12473529 -77031024 - L3 LINE CR1 -578 999 888 2219 105 3 7 chr17 12476328 12476634 -77027919 + AluSg SINE Alu 1 305 -5 201 39 0 0 chr17 12476634 12476660 -77027893 + (GA)n Simple_repeat Simple_repeat 2 27 0 1404 279 99 122 chr17 12476717 12477531 -77027022 + L2 LINE L2 124 955 -2359 207 0 0 0 chr17 12477531 12477554 -77026999 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 802 91 0 0 chr17 12477556 12477655 -77026898 - AluSg/x SINE Alu -25 287 189 1404 279 99 122 chr17 12477655 12477760 -77026793 + L2 LINE L2 956 1062 -2252 2080 120 10 3 chr17 12477760 12478061 -77026492 - AluSx SINE Alu -9 303 1 1404 279 99 122 chr17 12478061 12478914 -77025639 + L2 LINE L2 1062 1955 -1359 221 239 0 0 chr17 12479010 12479056 -77025497 + L2 LINE L2 3207 3252 -20 249 315 63 16 chr17 12479062 12479189 -77025364 - L2 LINE L2 -160 3153 3021 748 241 74 19 chr17 12479217 12479433 -77025120 - MIR SINE MIR -29 233 6 377 277 71 18 chr17 12479453 12479565 -77024988 + L2 LINE L2 3137 3254 -18 2327 80 7 10 chr17 12479585 12479885 -77024668 + AluSq SINE Alu 2 300 -13 621 304 63 33 chr17 12479959 12480294 -77024259 - MARNA DNA Mariner -217 369 25 2203 115 0 13 chr17 12480526 12480839 -77023714 + AluSq SINE Alu 5 313 0 457 314 83 0 chr17 12481075 12481231 -77023322 + MIR SINE MIR 9 177 -85 189 0 0 0 chr17 12481556 12481577 -77022976 + (TG)n Simple_repeat Simple_repeat 1 21 0 268 269 103 21 chr17 12482627 12482772 -77021781 + L1ME4a LINE L1 5318 5474 -647 2258 78 14 0 chr17 12482773 12483066 -77021487 + AluY SINE Alu 1 297 -14 980 151 0 42 chr17 12483077 12483243 -77021310 + AluSg/x SINE Alu 135 293 -17 2063 124 6 22 chr17 12483712 12484027 -77020526 - AluSx SINE Alu 0 312 3 826 113 0 0 chr17 12484093 12484208 -77020345 - AluJb SINE Alu -197 115 1 563 251 60 95 chr17 12484448 12484818 -77019735 + L1ME4a LINE L1 5595 5951 -170 818 171 53 18 chr17 12486896 12487066 -77017487 - MER5B DNA MER1_type -2 176 1 2253 104 0 7 chr17 12487460 12487769 -77016784 + AluY SINE Alu 1 307 -4 2234 96 0 10 chr17 12489222 12489513 -77015040 + AluSx SINE Alu 16 303 -9 1190 102 0 0 chr17 12490039 12490196 -77014357 + AluSg/x SINE Alu 154 310 0 303 140 0 0 chr17 12490203 12490253 -77014300 + (TA)n Simple_repeat Simple_repeat 2 51 0 231 203 0 51 chr17 12492705 12492764 -77011789 - L2 LINE L2 0 3272 3217 1772 190 0 0 chr17 12493683 12493993 -77010560 + AluJb SINE Alu 1 310 -2 1558 68 16 0 chr17 12495051 12495243 -77009310 + AluY SINE Alu 98 292 -19 1085 208 28 0 chr17 12495617 12495833 -77008720 - MER58B DNA MER1_type -3 338 117 2408 97 0 0 chr17 12496325 12496633 -77007920 + AluSc SINE Alu 1 308 -1 303 28 0 0 chr17 12497054 12497090 -77007463 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1217 112 0 6 chr17 12497602 12497763 -77006790 - AluSc SINE Alu -20 289 130 465 86 0 0 chr17 12497763 12497821 -77006732 - AluSg SINE Alu -217 93 36 259 289 72 30 chr17 12497849 12498015 -77006538 + L1M4 LINE L1 4640 4812 -1334 455 309 143 21 chr17 12498019 12498537 -77006016 - L1M4 LINE L1 -1891 4255 3675 335 281 79 9 chr17 12498533 12498647 -77005906 - L1MC/D LINE L1 -2303 5505 5384 * 495 259 16 32 chr17 12498672 12498861 -77005692 - L1MC/D LINE L1 -2361 5447 5262 2371 94 0 13 chr17 12499176 12499484 -77005069 + AluSq SINE Alu 1 304 -9 2353 97 0 3 chr17 12501826 12502135 -77002418 + AluSc SINE Alu 1 308 -1 453 145 0 0 chr17 12503042 12503118 -77001435 + (TTCTCC)n Simple_repeat Simple_repeat 4 79 0 343 304 102 31 chr17 12503844 12504248 -77000305 - MER41B LTR ERV1 -62 450 148 217 346 20 10 chr17 12504481 12504582 -76999971 + L2 LINE L2 2397 2498 -816 2505 57 6 19 chr17 12504623 12504938 -76999615 - AluY SINE Alu 0 311 1 2369 110 0 0 chr17 12504993 12505301 -76999252 - AluSx SINE Alu -4 308 1 2214 205 22 5 chr17 12505411 12505826 -76998727 - MSTA LTR MaLR -6 422 1 938 227 21 65 chr17 12505832 12505861 -76998692 + L2 LINE L2 2439 2468 -846 1960 98 0 0 chr17 12505861 12506107 -76998446 - AluSx SINE Alu -11 301 56 938 227 21 65 chr17 12506107 12506368 -76998185 + L2 LINE L2 2468 2716 -598 2351 95 3 0 chr17 12506368 12506664 -76997889 + AluSq SINE Alu 1 297 -16 277 140 20 0 chr17 12506665 12506715 -76997838 + L2 LINE L2 3263 3313 0 182 236 55 18 chr17 12507096 12507151 -76997402 + L2 LINE L2 3216 3272 0 2060 126 0 3 chr17 12507626 12507949 -76996604 - AluSx SINE Alu 0 322 1 297 289 20 92 chr17 12508837 12508989 -76995564 - MLT1K LTR MaLR -8 580 440 287 302 184 11 chr17 12509007 12509186 -76995367 - MLT1K LTR MaLR -369 219 10 2683 134 16 19 chr17 12509304 12509737 -76994816 - MSTB1 LTR MaLR 0 432 1 874 142 123 0 chr17 12511117 12511272 -76993281 - MER5A DNA MER1_type 0 189 16 2647 187 71 4 chr17 12511491 12512015 -76992538 - MER89 LTR ERV1 0 559 1 2273 131 0 0 chr17 12512223 12512535 -76992018 + AluSx SINE Alu 1 312 0 357 369 23 11 chr17 12513280 12513456 -76991097 - MIR3 SINE MIR -16 192 15 22 0 0 0 chr17 12514515 12514537 -76990016 + AT_rich Low_complexity Low_complexity 1 22 0 426 305 35 7 chr17 12515056 12515197 -76989356 + MIR SINE MIR 42 186 -76 215 208 0 42 chr17 12515459 12515507 -76989046 - L2 LINE L2 -18 3254 3209 1468 292 44 8 chr17 12515620 12516159 -76988394 + L2 LINE L2 2482 3039 -274 843 263 178 2 chr17 12516160 12516575 -76987978 + HAL1 LINE L1 2020 2507 0 2640 43 0 0 chr17 12517411 12517711 -76986842 + AluY SINE Alu 1 300 -11 858 176 48 6 chr17 12517922 12518087 -76986466 - L1MA9 LINE L1 -38 6274 6103 * 1754 195 151 5 chr17 12518084 12518474 -76986079 + L1MA8 LINE L1 5489 5935 -356 1996 189 103 13 chr17 12518714 12519170 -76985383 + MLT1D LTR MaLR 3 499 -6 2747 131 72 84 chr17 12519386 12520049 -76984504 - MER4A LTR ERV1 -9 655 1 1958 166 34 53 chr17 12520557 12521114 -76983439 - MLT2A2 LTR ERVL 0 554 1 310 265 0 0 chr17 12521115 12521198 -76983355 + L1ME4a LINE L1 3896 3978 -2168 328 295 110 18 chr17 12521524 12521751 -76982802 + L1ME4a LINE L1 4370 4617 -1529 359 269 106 24 chr17 12521811 12522019 -76982534 + L1ME4a LINE L1 5735 5959 -162 198 0 0 0 chr17 12522019 12522041 -76982512 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 264 59 0 0 chr17 12522040 12522074 -76982479 + (TA)n Simple_repeat Simple_repeat 1 34 0 2154 108 0 4 chr17 12522603 12522881 -76981672 - AluSg SINE Alu -33 277 1 752 83 8 75 chr17 12522888 12523021 -76981532 - L1PA13 LINE L1 -2 6161 6038 3381 120 21 53 chr17 12523023 12523180 -76981373 - L1PA13 LINE L1 -715 5459 5298 11177 20 3 1 chr17 12523180 12525228 -76979325 - L1PA3 LINE L1 0 6155 4106 3381 120 21 53 chr17 12525228 12525777 -76978776 - L1PA13 LINE L1 -876 5298 4770 443 301 24 43 chr17 12525889 12526098 -76978455 + LTR33 LTR ERVL 12 216 -305 273 304 9 0 chr17 12526392 12526504 -76978049 + L1P LINE L1 5293 5405 -763 23 0 0 0 chr17 12526579 12526602 -76977951 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 37 24 chr17 12526679 12526761 -76977792 + (TTAA)n Simple_repeat Simple_repeat 1 83 0 349 316 63 15 chr17 12526761 12526967 -76977586 + L1ME LINE L1 5578 5793 -328 785 281 108 33 chr17 12527004 12527020 -76977533 + L2 LINE L2 2475 2488 -825 2531 58 0 0 chr17 12527020 12527312 -76977241 - AluY SINE Alu -19 292 1 785 281 108 33 chr17 12527312 12528065 -76976488 + L2 LINE L2 2488 3307 -6 541 296 80 75 chr17 12528090 12528479 -76976074 - L2 LINE L2 0 3313 2923 2166 116 3 10 chr17 12528543 12528844 -76975709 + AluSx SINE Alu 1 299 -13 313 358 142 21 chr17 12529006 12529265 -76975288 - L2 LINE L2 0 3313 3087 2006 124 3 24 chr17 12529265 12529593 -76974960 - AluSq SINE Alu 0 322 1 313 358 142 21 chr17 12529593 12529768 -76974785 - L2 LINE L2 -226 3087 2825 300 303 81 25 chr17 12529803 12530001 -76974552 + MLT1K LTR MaLR 377 585 -3 3057 187 75 67 chr17 12530458 12530991 -76973562 + MER54B LTR ERVL 3 546 -355 426 94 0 0 chr17 12530991 12531055 -76973498 + (TA)n Simple_repeat Simple_repeat 1 64 0 3057 187 75 67 chr17 12531055 12531415 -76973138 + MER54B LTR ERVL 546 901 0 186 317 17 0 chr17 12531514 12531574 -76972979 - MIR SINE MIR -61 147 87 380 286 71 7 chr17 12532691 12532831 -76971722 - Charlie8 DNA MER1_type -2268 149 1 3134 107 169 18 chr17 12533208 12533243 -76971310 - LTR24C LTR ERV1 0 635 607 920 118 0 15 chr17 12533243 12533378 -76971175 - FLAM_C SINE Alu 0 133 1 3134 107 169 18 chr17 12533378 12533894 -76970659 - LTR24C LTR ERV1 -28 607 1 473 365 40 0 chr17 12533965 12534187 -76970366 + MIR SINE MIR 6 236 -26 2146 112 0 23 chr17 12534594 12534898 -76969655 + AluY SINE Alu 1 297 -14 755 153 0 76 chr17 12535057 12535201 -76969352 - FLAM_C SINE Alu 0 133 1 2234 153 75 5 chr17 12535819 12536217 -76968336 + MSTA LTR MaLR 3 428 0 275 208 131 39 chr17 12536221 12536351 -76968202 + L1ME4a LINE L1 5980 6121 0 430 278 142 19 chr17 12536516 12536721 -76967832 + Charlie8 DNA MER1_type 36 265 -2152 351 134 0 175 chr17 12536934 12536979 -76967574 + MADE1 DNA Mariner 1 52 -28 2139 122 7 3 chr17 12536979 12537282 -76967271 + AluSq SINE Alu 1 304 -9 351 134 0 175 chr17 12537282 12537307 -76967246 + MADE1 DNA Mariner 52 52 -28 2268 116 3 0 chr17 12537307 12537609 -76966944 + AluSx SINE Alu 1 303 -9 351 134 0 175 chr17 12537609 12537634 -76966919 + MADE1 DNA Mariner 52 80 0 2737 135 29 0 chr17 12537705 12538119 -76966434 - MSTB LTR MaLR 0 426 1 225 203 32 114 chr17 12538127 12538250 -76966303 - HAL1b LINE L1 -490 858 746 423 298 18 75 chr17 12538528 12538730 -76965823 - HAL1 LINE L1 -780 1727 1556 2365 88 10 0 chr17 12538730 12539037 -76965516 - AluSp SINE Alu -3 310 1 423 298 18 75 chr17 12539037 12539220 -76965333 - HAL1 LINE L1 -951 1556 1364 * 45566 33 3 1 chr17 12539202 12545349 -76959204 - L1PA3 LINE L1 0 6155 2 790 269 84 44 chr17 12545374 12545924 -76958629 - HAL1 LINE L1 -1172 1335 764 257 320 50 10 chr17 12546318 12546418 -76958135 - HAL1 LINE L1 -2399 108 5 1676 266 79 19 chr17 12547945 12548463 -76956090 - MLT1H1 LTR MaLR 0 555 7 227 360 34 34 chr17 12548961 12549136 -76955417 + MIR3 SINE MIR 33 207 -1 193 318 12 0 chr17 12549438 12549523 -76955030 - MIR SINE MIR -36 226 141 2620 47 0 0 chr17 12550815 12551116 -76953437 + AluY SINE Alu 1 301 -10 732 201 14 0 chr17 12551445 12551584 -76952969 - Charlie4 DNA MER1_type -3 1958 1818 1464 193 42 3 chr17 12551778 12552089 -76952464 + L1MB5 LINE L1 5852 6174 0 2239 117 0 0 chr17 12552139 12552439 -76952114 + AluSx SINE Alu 1 300 -12 233 292 121 21 chr17 12553559 12553799 -76950754 - L3 LINE CR1 -37 1540 1277 217 313 0 0 chr17 12554221 12554285 -76950268 - MIR SINE MIR -110 152 89 1596 147 65 187 chr17 12554308 12554442 -76950111 + L1MB3 LINE L1 5680 5829 -354 973 122 45 0 chr17 12554442 12554598 -76949955 + L1MA2 LINE L1 6142 6304 0 1596 147 65 187 chr17 12554598 12554884 -76949669 + L1MB3 LINE L1 5829 6031 -152 2090 78 28 28 chr17 12554884 12555194 -76949359 - AluSg SINE Alu 0 310 1 1596 147 65 187 chr17 12555194 12555328 -76949225 + L1MB3 LINE L1 6031 6180 -3 21 36 0 0 chr17 12555328 12555356 -76949197 + AT_rich Low_complexity Low_complexity 1 28 0 2420 99 0 3 chr17 12555367 12555680 -76948873 + AluSq SINE Alu 1 312 -1 1837 102 8 4 chr17 12555966 12556210 -76948343 - AluSx SINE Alu -67 245 1 320 271 24 0 chr17 12556330 12556415 -76948138 + L2 LINE L2 3223 3309 -4 1712 152 7 52 chr17 12556704 12557044 -76947509 - AluJb SINE Alu 0 312 1 26 0 0 0 chr17 12557214 12557240 -76947313 + AT_rich Low_complexity Low_complexity 1 26 0 257 257 169 35 chr17 12557756 12558099 -76946454 + L1ME4a LINE L1 5716 6104 -17 510 275 88 6 chr17 12559027 12559198 -76945355 - MER91B DNA MER1_type -5 185 1 2184 112 3 16 chr17 12559803 12560106 -76944447 + AluSg SINE Alu 1 299 -11 1240 209 200 0 chr17 12560252 12560577 -76943976 - MLT1B LTR MaLR 0 390 1 971 279 91 17 chr17 12560703 12561112 -76943441 - L2 LINE L2 0 3313 2875 208 320 0 0 chr17 12563125 12563175 -76941378 - L2 LINE L2 -10 3262 3213 202 403 59 21 chr17 12563226 12563412 -76941141 - L2 LINE L2 0 3272 3080 470 260 59 35 chr17 12563625 12563879 -76940674 - L1MEd LINE L1 -5037 1082 823 2334 72 3 3 chr17 12564217 12564534 -76940019 + AluSq SINE Alu 1 313 0 309 68 0 0 chr17 12565899 12565943 -76938610 + (CA)n Simple_repeat Simple_repeat 1 44 0 2412 66 3 7 chr17 12566158 12566459 -76938094 - AluY SINE Alu -11 300 1 897 241 61 13 chr17 12567456 12567767 -76936786 + MER102a DNA MER1_type 5 330 0 230 266 31 0 chr17 12567823 12567887 -76936666 - L2 LINE L2 -2 3311 3246 1632 161 77 11 chr17 12568827 12569163 -76935390 - AluJo SINE Alu 0 355 1 2060 147 10 0 chr17 12569534 12569841 -76934712 - AluSx SINE Alu -2 310 1 560 250 31 0 chr17 12570307 12570435 -76934118 - MER117 DNA MER1_type -49 148 17 2167 117 0 10 chr17 12570732 12571030 -76933523 - AluSx SINE Alu -17 295 1 421 75 0 0 chr17 12571129 12571182 -76933371 - tRNA-Arg-CGC tRNA tRNA -23 53 1 3849 52 10 20 chr17 12571567 12572068 -76932485 + L1PA8 LINE L1 5677 6172 0 234 258 45 22 chr17 12573146 12573235 -76931318 - MIR SINE MIR -49 213 123 1711 184 66 8 chr17 12573648 12574028 -76930525 - L1MD1 LINE L1 0 6242 5841 276 291 7 68 chr17 12574032 12574180 -76930373 + MARNA DNA Mariner 45 183 -403 240 200 0 0 chr17 12574206 12574251 -76930302 - MER58A DNA MER1_type 0 224 180 937 196 58 27 chr17 12574253 12574477 -76930076 - MLT1B LTR MaLR -159 231 1 832 165 133 6 chr17 12574491 12574649 -76929904 - MER58A DNA MER1_type -46 178 1 1433 167 75 35 chr17 12574892 12574985 -76929568 - Charlie5 DNA MER1_type -1 2623 2535 1981 129 14 0 chr17 12574985 12575271 -76929282 + AluSq SINE Alu 1 290 -23 1433 167 75 35 chr17 12575271 12575548 -76929005 - Charlie5 DNA MER1_type -89 2535 2238 545 208 0 0 chr17 12575577 12575678 -76928875 - Charlie5 DNA MER1_type -2506 106 6 397 264 101 44 chr17 12575804 12575963 -76928590 + MIR SINE MIR 23 190 -72 1555 204 57 64 chr17 12575996 12576291 -76928262 - MLT1C LTR MaLR 0 467 175 2392 88 7 0 chr17 12576291 12576597 -76927956 - AluSc SINE Alu -1 308 1 1555 204 57 64 chr17 12576597 12576771 -76927782 - MLT1C LTR MaLR -292 175 1 209 149 43 0 chr17 12577057 12577104 -76927449 + (CTTTG)n Simple_repeat Simple_repeat 1 49 0 23 0 0 0 chr17 12577353 12577376 -76927177 + AT_rich Low_complexity Low_complexity 1 23 0 334 258 83 33 chr17 12578022 12578142 -76926411 - L2 LINE L2 -19 3253 3128 207 100 0 75 chr17 12578872 12578912 -76925641 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1553 202 91 33 chr17 12579078 12579474 -76925079 - LTR52 LTR ERVL 0 421 3 1390 111 16 74 chr17 12579504 12579590 -76924963 + MER30 DNA MER1_type 1 90 -140 2206 107 0 0 chr17 12579590 12579891 -76924662 + AluSx SINE Alu 1 301 0 1390 111 16 74 chr17 12579891 12580047 -76924506 + MER30 DNA MER1_type 90 230 0 189 237 79 13 chr17 12580473 12580549 -76924004 - L2 LINE L2 -769 2545 2465 2380 98 0 0 chr17 12581235 12581542 -76923011 + AluSg1 SINE Alu 1 307 -2 542 218 15 15 chr17 12581578 12581711 -76922842 + L1MB8 LINE L1 6040 6172 -6 2194 117 7 7 chr17 12581807 12582115 -76922438 + AluSx SINE Alu 3 310 -2 434 335 165 32 chr17 12582156 12582525 -76922028 - L2 LINE L2 -2369 945 626 2459 83 0 6 chr17 12582525 12582837 -76921716 + AluSg SINE Alu 1 310 0 434 335 165 32 chr17 12582837 12583056 -76921497 - L2 LINE L2 -2688 626 279 2306 92 0 7 chr17 12583128 12583432 -76921121 + AluSc SINE Alu 1 302 -7 280 302 23 0 chr17 12583687 12583773 -76920780 + MIR SINE MIR 41 128 -80 4002 89 30 27 chr17 12584305 12584521 -76920032 + L1PA11 LINE L1 5575 5789 -385 2376 108 0 0 chr17 12584521 12584828 -76919725 + AluSq SINE Alu 1 307 -6 4002 89 30 27 chr17 12584828 12585209 -76919344 + L1PA11 LINE L1 5789 6174 0 1911 100 38 14 chr17 12585252 12585365 -76919188 - MER4B LTR ERV1 -314 296 187 2125 103 35 0 chr17 12585365 12585647 -76918906 + AluSp SINE Alu 1 292 -21 1911 100 38 14 chr17 12585647 12585822 -76918731 - MER4B LTR ERV1 -423 187 1 293 269 0 0 chr17 12586174 12586241 -76918312 + MER74B LTR ERVL 1 67 -555 758 167 8 24 chr17 12586325 12586451 -76918102 + MER8 DNA MER2_type 116 239 0 534 184 0 0 chr17 12586483 12586581 -76917972 - L1MA5A LINE L1 -4 6293 6196 4111 133 74 1 chr17 12586581 12587230 -76917323 - LTR62 LTR ERVK -5 714 19 682 97 0 10 chr17 12587238 12587341 -76917212 - L1MA5A LINE L1 -94 6203 6102 1946 249 34 15 chr17 12587341 12587864 -76916689 + MER74B LTR ERVL 80 612 -10 6127 206 46 51 chr17 12587910 12588151 -76916402 - L1MB8 LINE L1 0 6178 5937 2472 65 3 0 chr17 12588151 12588444 -76916109 + AluY SINE Alu 1 294 -17 6127 206 46 51 chr17 12588444 12590199 -76914354 - L1MB8 LINE L1 -241 5937 4175 2046 92 4 8 chr17 12590199 12590461 -76914092 - AluSc SINE Alu -16 293 33 6127 206 46 51 chr17 12590461 12591062 -76913491 - L1MB8 LINE L1 -2003 4175 3595 2281 119 0 0 chr17 12591062 12591357 -76913196 + AluSx SINE Alu 1 295 -17 6127 206 46 51 chr17 12591357 12591582 -76912971 - L1MB8 LINE L1 -2583 3595 3370 2605 68 0 0 chr17 12591679 12591988 -76912565 + AluY SINE Alu 3 311 0 876 285 123 36 chr17 12592505 12593080 -76911473 - HAL1 LINE L1 -586 1921 1297 736 303 72 18 chr17 12593087 12593420 -76911133 + L2 LINE L2 2406 2756 -558 2152 108 7 0 chr17 12593420 12593742 -76910811 + AluSc SINE Alu 1 309 0 245 295 13 13 chr17 12595206 12595284 -76909269 + GA-rich Low_complexity Low_complexity 1 78 0 2425 89 0 9 chr17 12595318 12595633 -76908920 - AluSq SINE Alu -1 312 1 1768 161 7 4 chr17 12596382 12596707 -76907846 - AluJb SINE Alu 0 326 1 2273 95 3 7 chr17 12596880 12597174 -76907379 + AluSx SINE Alu 1 293 -19 2709 49 0 0 chr17 12597390 12597698 -76906855 + AluY SINE Alu 1 308 -3 2166 96 3 7 chr17 12598205 12598487 -76906066 - AluSp SINE Alu -7 306 26 2473 106 0 0 chr17 12598515 12598827 -76905726 + AluSx SINE Alu 1 312 0 2007 115 0 0 chr17 12599035 12599295 -76905258 + AluSq SINE Alu 1 260 -53 833 105 0 0 chr17 12599295 12599400 -76905153 + AluSg/x SINE Alu 159 263 -49 2178 77 0 15 chr17 12601229 12601544 -76903009 - AluSq SINE Alu 0 323 13 2013 73 0 0 chr17 12601544 12601787 -76902766 - AluYb8 SINE Alu -73 245 1 2503 88 0 0 chr17 12602793 12603100 -76901453 - AluSx SINE Alu -5 307 1 243 0 0 0 chr17 12604212 12604239 -76900314 + (A)n Simple_repeat Simple_repeat 1 27 0 319 241 135 15 chr17 12604276 12604409 -76900144 - MER103 DNA DNA -10 156 8 6909 76 9 3 chr17 12604418 12605752 -76898801 - L1PA11 LINE L1 0 6174 4834 468 51 0 0 chr17 12606268 12606327 -76898226 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 883 134 0 0 chr17 12606328 12606447 -76898106 - AluSq/x SINE Alu -194 119 1 376 280 11 0 chr17 12607032 12607125 -76897428 - MER5A DNA MER1_type -85 104 11 2635 62 0 0 chr17 12607201 12607510 -76897043 - AluY SINE Alu -2 309 1 972 176 6 0 chr17 12607519 12607695 -76896858 + MER5A DNA MER1_type 8 184 -5 470 120 60 40 chr17 12607830 12607930 -76896623 + L1MB3 LINE L1 6080 6181 -2 484 104 0 0 chr17 12608748 12608815 -76895738 + MER5A DNA MER1_type 9 75 -114 1191 70 0 0 chr17 12608816 12608959 -76895594 + AluY SINE Alu 157 299 -12 466 152 181 0 chr17 12608960 12609065 -76895488 + MER5A DNA MER1_type 66 189 0 237 281 56 11 chr17 12609283 12609372 -76895181 - MLT1E LTR MaLR -500 93 1 198 253 58 23 chr17 12610450 12610537 -76894016 + MER5A DNA MER1_type 97 186 -3 * 524 151 0 0 chr17 12610461 12610547 -76894006 - MER5A DNA MER1_type -96 93 8 398 237 11 0 chr17 12610621 12610714 -76893839 + MER5A DNA MER1_type 11 104 -85 2546 72 3 0 chr17 12611551 12611856 -76892697 - AluSp SINE Alu -7 306 1 2595 38 0 22 chr17 12612612 12612928 -76891625 - AluY SINE Alu -2 309 1 2207 97 13 7 chr17 12613138 12613438 -76891115 - AluSx SINE Alu -10 302 1 2575 63 0 0 chr17 12613550 12613850 -76890703 - AluSg SINE Alu -10 300 1 1414 193 7 48 chr17 12614524 12614819 -76889734 + AluJb SINE Alu 1 283 -29 198 0 0 0 chr17 12614828 12614850 -76889703 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 2292 73 10 3 chr17 12616369 12616657 -76887896 + AluSg SINE Alu 16 305 -5 1760 181 0 23 chr17 12616766 12617075 -76887478 - AluJo SINE Alu -10 302 1 717 97 35 14 chr17 12617984 12618128 -76886425 + (TGGA)n Simple_repeat Simple_repeat 4 150 0 21 0 0 0 chr17 12618642 12618663 -76885890 + AT_rich Low_complexity Low_complexity 1 21 0 215 259 141 12 chr17 12618985 12619070 -76885483 - MIR SINE MIR -123 139 44 217 143 0 24 chr17 12619489 12619531 -76885022 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 619 38 19 38 chr17 12619871 12619977 -76884576 + (TAGA)n Simple_repeat Simple_repeat 3 106 0 206 255 10 20 chr17 12619978 12620076 -76884477 + (TA)n Simple_repeat Simple_repeat 1 97 0 2560 66 3 0 chr17 12621066 12621370 -76883183 - AluY SINE Alu -6 305 1 2371 83 3 0 chr17 12621573 12621875 -76882678 + AluY SINE Alu 1 303 -8 244 235 98 39 chr17 12622924 12623026 -76881527 + MER5A DNA MER1_type 80 187 -2 2107 124 0 3 chr17 12623432 12623730 -76880823 + AluSx SINE Alu 2 298 -14 1004 238 0 0 chr17 12623751 12623953 -76880600 + L1PB4 LINE L1 5927 6128 -28 1156 53 0 0 chr17 12623953 12624085 -76880468 + AluY SINE Alu 1 132 -179 2271 104 0 7 chr17 12624092 12624399 -76880154 + AluSx SINE Alu 1 305 -7 2366 96 0 3 chr17 12624558 12624870 -76879683 + AluY SINE Alu 1 311 0 1059 169 86 25 chr17 12625584 12625862 -76878691 + MER33 DNA MER1_type 7 301 -23 2196 82 58 7 chr17 12625949 12626241 -76878312 - AluSg SINE Alu -3 307 1 2382 85 3 3 chr17 12626401 12626706 -76877847 - AluSx SINE Alu -7 305 1 2212 114 10 0 chr17 12627658 12627955 -76876598 - AluSp SINE Alu -13 300 1 1753 161 6 22 chr17 12628232 12628554 -76875999 - L1MC1 LINE L1 0 6333 6017 260 242 16 0 chr17 12628572 12628634 -76875919 - AluSp/q SINE Alu -7 296 234 1161 155 24 24 chr17 12628636 12628842 -76875711 - AluJo SINE Alu -106 206 1 1097 146 0 0 chr17 12629575 12629726 -76874827 + AluSq/x SINE Alu 1 151 -162 440 172 0 35 chr17 12629729 12629816 -76874737 + FLAM_A SINE Alu 50 133 -9 2227 121 0 0 chr17 12629819 12630116 -76874437 + AluSg SINE Alu 1 297 -13 498 233 121 0 chr17 12630118 12630234 -76874319 - MER3 DNA MER1_type -71 138 9 1576 176 6 60 chr17 12630316 12630635 -76873918 - AluJo SINE Alu -10 302 1 448 143 26 0 chr17 12630635 12630712 -76873841 + MER3 DNA MER1_type 125 203 -6 302 222 0 0 chr17 12630675 12630729 -76873824 - MER3 DNA MER1_type -119 90 37 * 1350 187 16 89 chr17 12630971 12631367 -76873186 - MLT1A2 LTR MaLR 0 390 4 1722 61 223 4 chr17 12631706 12631953 -76872600 + AluY SINE Alu 1 301 -10 1020 233 75 19 chr17 12631957 12632330 -76872223 + L1MEc LINE L1 1195 1588 -5133 1140 267 35 41 chr17 12632345 12632855 -76871698 + L1MEc LINE L1 1535 2041 -4680 748 143 0 8 chr17 12632856 12632975 -76871578 + AluSg/x SINE Alu 191 308 -1 1161 243 53 9 chr17 12632975 12633312 -76871241 + L1MEc LINE L1 2042 2393 -4328 1063 203 18 57 chr17 12633314 12633541 -76871012 + MER58A DNA MER1_type 7 224 0 2005 251 54 30 chr17 12633588 12633693 -76870860 + L1MEc LINE L1 2521 2622 -3918 1711 238 50 53 chr17 12633693 12634257 -76870296 - MER68 LTR ERV1 0 562 1 2005 251 54 30 chr17 12634257 12634895 -76869658 + L1MEc LINE L1 2622 3282 -3258 1618 249 60 14 chr17 12634904 12635539 -76869014 + L1MEc LINE L1 3330 3993 -2547 * 1690 206 16 39 chr17 12635533 12635921 -76868632 + L1MEc LINE L1 20 398 -6142 1171 163 0 0 chr17 12635921 12636117 -76868436 + L1MD1 LINE L1 6042 6237 -5 2143 146 40 22 chr17 12636126 12636531 -76868022 + L1MC1 LINE L1 5673 6084 -249 242 184 0 20 chr17 12636546 12636595 -76867958 + L1MC2 LINE L1 6041 6088 -256 1692 135 10 24 chr17 12636650 12636938 -76867615 + L1MC1 LINE L1 6050 6333 0 1197 295 77 14 chr17 12636944 12637453 -76867100 + L1MEc LINE L1 4008 4548 -1992 301 288 16 40 chr17 12637884 12638009 -76866544 - MER117 DNA MER1_type -75 122 1 2534 87 0 0 chr17 12638330 12638639 -76865914 + AluSx SINE Alu 1 309 -3 2095 116 3 20 chr17 12638648 12638950 -76865603 + AluSx SINE Alu 1 297 -15 2399 96 0 0 chr17 12639209 12639511 -76865042 + AluSx SINE Alu 1 302 -10 703 235 149 5 chr17 12640621 12640842 -76863711 + MIR SINE MIR 2 254 -8 688 67 11 0 chr17 12640873 12640963 -76863590 - AluSg/x SINE Alu -45 267 177 684 167 127 0 chr17 12641172 12641322 -76863231 + MLT1C LTR MaLR 8 176 -291 2493 74 3 0 chr17 12641329 12641627 -76862926 + AluSp SINE Alu 1 299 -14 1012 146 52 38 chr17 12641643 12641856 -76862697 + L1PA16 LINE L1 5951 6166 0 1315 197 42 8 chr17 12642040 12642299 -76862254 + MLT1C LTR MaLR 200 467 0 6993 211 58 57 chr17 12642689 12644584 -76859969 + L1M4 LINE L1 5 1897 -4747 192 40 0 0 chr17 12644584 12644609 -76859944 + (GA)n Simple_repeat Simple_repeat 2 26 0 6993 211 58 57 chr17 12644609 12644955 -76859598 + L1M4 LINE L1 1897 2241 -4403 1931 116 94 0 chr17 12644955 12645231 -76859322 + AluSx SINE Alu 1 302 -10 6993 211 58 57 chr17 12645231 12645277 -76859276 + L1M4 LINE L1 2241 2285 -4359 1785 173 3 10 chr17 12645277 12645583 -76858970 - AluJo SINE Alu -8 304 1 6993 211 58 57 chr17 12645583 12646219 -76858334 + L1M4 LINE L1 2285 3050 -3594 795 211 0 0 chr17 12646231 12646373 -76858180 + L1MB7 LINE L1 6009 6150 -34 539 214 84 26 chr17 12646694 12646848 -76857705 + MER103 DNA DNA 2 164 -2 257 326 74 0 chr17 12647095 12647190 -76857363 + L2 LINE L2 3171 3272 0 222 215 31 15 chr17 12648095 12648160 -76856393 + MER5A DNA MER1_type 123 188 -1 800 263 5 10 chr17 12648169 12648367 -76856186 - MER58A DNA MER1_type 0 224 28 2318 98 0 0 chr17 12648562 12648858 -76855695 - AluSx SINE Alu -16 296 1 613 158 267 7 chr17 12649072 12649218 -76855335 - MER5A DNA MER1_type 0 189 6 2287 90 10 26 chr17 12649556 12649867 -76854686 + AluSc SINE Alu 1 306 -3 2700 90 58 21 chr17 12649932 12650364 -76854189 + LTR7 LTR ERV1 1 448 -2 16412 97 27 24 chr17 12650366 12653468 -76851085 + HERVH LTR ERV1 1 2987 -4726 878 129 20 7 chr17 12653462 12653609 -76850944 + HERVH LTR ERV1 3140 3288 -4425 * 974 142 0 7 chr17 12653601 12653749 -76850804 + HERVH LTR ERV1 3492 3638 -4075 * 1247 147 0 1 chr17 12653739 12654100 -76850453 + HERVH LTR ERV1 4744 5149 -2564 2634 92 50 35 chr17 12654101 12654690 -76849863 + HERVH LTR ERV1 5600 7713 0 2645 95 58 21 chr17 12654690 12655122 -76849431 + LTR7 LTR ERV1 1 448 -2 258 32 0 0 chr17 12657012 12657043 -76847510 + (T)n Simple_repeat Simple_repeat 1 31 0 472 229 78 52 chr17 12657267 12657498 -76847055 - L1ME4a LINE L1 -1 6120 5884 216 0 0 0 chr17 12657957 12657981 -76846572 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 695 288 97 59 chr17 12658013 12658551 -76846002 - L1ME4a LINE L1 -263 5858 5304 2198 88 14 7 chr17 12658606 12658890 -76845663 - AluSx SINE Alu -21 291 6 299 249 46 86 chr17 12658930 12659127 -76845426 - L1ME4a LINE L1 -1318 4828 4640 1409 85 5 35 chr17 12659495 12659694 -76844859 - AluSq SINE Alu -12 301 109 450 209 0 0 chr17 12659885 12659971 -76844582 + L1MC1 LINE L1 6248 6333 0 658 203 114 46 chr17 12660004 12660039 -76844514 + MER112 DNA MER1_type 8 39 -221 1136 183 72 113 chr17 12660039 12660427 -76844126 + MLT1A2 LTR MaLR 3 374 0 658 203 114 46 chr17 12660427 12660628 -76843925 + MER112 DNA MER1_type 39 260 0 378 0 0 0 chr17 12660834 12660876 -76843677 + (TG)n Simple_repeat Simple_repeat 2 43 0 480 290 107 18 chr17 12661883 12662107 -76842446 + MIR SINE MIR 3 246 -16 2115 102 20 16 chr17 12662678 12662983 -76841570 - AluSc SINE Alu -3 306 1 207 0 0 0 chr17 12662995 12663018 -76841535 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 585 280 86 11 chr17 12663483 12663669 -76840884 + MIR SINE MIR 4 203 -59 362 278 23 53 chr17 12663770 12663903 -76840650 + L2 LINE L2 3169 3297 -16 2313 124 33 28 chr17 12664148 12664510 -76840043 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr17 12664739 12664766 -76839787 + AT_rich Low_complexity Low_complexity 1 27 0 2168 185 92 184 chr17 12666310 12667008 -76837545 + L1MEc LINE L1 35 656 -5740 1060 157 42 60 chr17 12667008 12667053 -76837500 + AluJo SINE Alu 92 136 -176 2309 107 0 0 chr17 12667053 12667352 -76837201 + AluSx SINE Alu 1 299 -13 1060 157 42 60 chr17 12667352 12667522 -76837031 + AluJo SINE Alu 136 303 -9 2168 185 92 184 chr17 12667522 12668009 -76836544 + L1MEc LINE L1 656 1186 -5210 789 209 63 106 chr17 12667995 12668386 -76836167 + L1MEc LINE L1 1058 1383 -4832 * 394 264 42 16 chr17 12668430 12668598 -76835955 + L1ME2 LINE L1 5860 6035 -142 2456 254 65 45 chr17 12669748 12670535 -76834018 + MER21B LTR ERV1 1 803 -60 2525 61 0 13 chr17 12671715 12672026 -76832527 + AluY SINE Alu 1 307 -4 1666 163 101 88 chr17 12672532 12672736 -76831817 - Tigger2a DNA MER2_type -2274 434 234 2522 66 0 0 chr17 12672736 12673038 -76831515 + AluY SINE Alu 1 302 -9 1666 163 101 88 chr17 12673038 12673231 -76831322 - Tigger2a DNA MER2_type -2474 234 32 1729 123 0 20 chr17 12673305 12673556 -76830997 + AluSq SINE Alu 3 248 -65 2199 114 0 0 chr17 12673577 12673876 -76830677 + AluSx SINE Alu 1 299 -13 519 203 178 6 chr17 12673879 12674042 -76830511 + L1MEc LINE L1 2660 2850 -3365 651 197 107 26 chr17 12674195 12674429 -76830124 + L1MEc LINE L1 2850 3102 -3113 22 0 0 0 chr17 12674431 12674453 -76830100 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr17 12674701 12674739 -76829814 + AT_rich Low_complexity Low_complexity 1 38 0 208 271 94 24 chr17 12674904 12674989 -76829564 - MIR SINE MIR -4 258 168 247 171 92 26 chr17 12675082 12675158 -76829395 + MER20B DNA MER1_type 43 123 -660 234 222 0 0 chr17 12675894 12675939 -76828614 - L2 LINE L2 -19 3294 3250 203 0 37 0 chr17 12676221 12676248 -76828305 + (TC)n Simple_repeat Simple_repeat 1 28 0 31 0 0 0 chr17 12676602 12676633 -76827920 + AT_rich Low_complexity Low_complexity 1 31 0 354 182 0 69 chr17 12676640 12676799 -76827754 + (CATGT)n Simple_repeat Simple_repeat 3 150 0 278 346 85 11 chr17 12676808 12676996 -76827557 + L3 LINE CR1 1184 1385 -192 180 0 0 0 chr17 12676999 12677019 -76827534 + (T)n Simple_repeat Simple_repeat 1 20 0 1047 98 0 0 chr17 12677019 12677152 -76827401 - AluSq/x SINE Alu -179 133 1 808 300 102 20 chr17 12677756 12678099 -76826454 - L2 LINE L2 0 3313 2943 1841 158 28 0 chr17 12678102 12678393 -76826160 - AluSx SINE Alu -9 303 5 1445 227 159 34 chr17 12678419 12678604 -76825949 - L2 LINE L2 -1139 2175 2014 1685 143 14 38 chr17 12678604 12678891 -76825662 + AluSp SINE Alu 2 281 -32 231 36 0 0 chr17 12678891 12678919 -76825634 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 1445 227 159 34 chr17 12678919 12679261 -76825292 - L2 LINE L2 -1299 2015 1581 1695 126 38 31 chr17 12679407 12679524 -76825029 + L1MA7 LINE L1 5997 6112 -179 2283 82 0 0 chr17 12679524 12679837 -76824716 + AluY SINE Alu 1 313 0 1695 126 38 31 chr17 12679837 12680011 -76824542 + L1MA7 LINE L1 6112 6291 0 210 263 18 0 chr17 12680190 12680247 -76824306 + GA-rich Low_complexity Low_complexity 1 58 0 2196 117 7 3 chr17 12680295 12680603 -76823950 + AluSc SINE Alu 1 309 0 212 356 34 39 chr17 12680668 12680822 -76823731 - MIR SINE MIR -63 145 3 2035 95 56 7 chr17 12681350 12681634 -76822919 + AluSg SINE Alu 1 298 -12 1208 257 39 81 chr17 12681975 12682127 -76822426 + Charlie7 DNA MER1_type 116 273 -2339 2420 75 0 7 chr17 12682127 12682422 -76822131 + AluSg SINE Alu 1 293 -17 1208 257 39 81 chr17 12682422 12682782 -76821771 + Charlie7 DNA MER1_type 273 604 -2008 2378 100 3 0 chr17 12682782 12683092 -76821461 + AluSp SINE Alu 1 311 -2 1208 257 39 81 chr17 12683092 12683147 -76821406 + Charlie7 DNA MER1_type 604 660 -1952 22 56 0 0 chr17 12683172 12683208 -76821345 + AT_rich Low_complexity Low_complexity 1 36 0 237 236 30 6 chr17 12683233 12683398 -76821155 + (TA)n Simple_repeat Simple_repeat 2 170 0 348 180 180 62 chr17 12683398 12683526 -76821027 + Charlie7 DNA MER1_type 733 875 -1737 * 1656 220 113 32 chr17 12683522 12684122 -76820431 + Charlie7 DNA MER1_type 1956 2604 -8 355 283 72 26 chr17 12684146 12684298 -76820255 - MER5A DNA MER1_type -6 183 25 530 265 0 15 chr17 12684538 12684670 -76819883 + MIR SINE MIR 107 236 -26 817 213 73 0 chr17 12684777 12684927 -76819626 + AluJb SINE Alu 133 293 -19 228 67 0 0 chr17 12685202 12685232 -76819321 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 239 176 235 29 chr17 12686408 12686476 -76818077 + Charlie8 DNA MER1_type 1 82 -2335 733 171 0 8 chr17 12686530 12686675 -76817878 - FLAM_A SINE Alu 0 144 1 2412 106 0 0 chr17 12687618 12687929 -76816624 - AluSx SINE Alu -1 311 1 2329 78 0 7 chr17 12688596 12688892 -76815661 - AluSc SINE Alu -15 294 1 2196 123 0 3 chr17 12689559 12689860 -76814693 - AluSc SINE Alu -9 300 1 2401 99 0 0 chr17 12689872 12690174 -76814379 - AluSg SINE Alu -7 303 2 1531 255 144 15 chr17 12690259 12690862 -76813691 - L1MC4a LINE L1 -1712 6096 5416 880 242 11 6 chr17 12690863 12691041 -76813512 - AluJb SINE Alu -22 290 112 407 290 28 46 chr17 12691041 12691132 -76813421 - L1MC4a LINE L1 -777 5369 5278 2297 99 0 0 chr17 12691132 12691426 -76813127 - AluSc SINE Alu -15 294 1 407 290 28 46 chr17 12691426 12691551 -76813002 - L1MC4a LINE L1 -868 5278 5157 3912 158 16 40 chr17 12692280 12692945 -76811608 + L1MB7 LINE L1 5457 6105 -79 2414 68 7 0 chr17 12692945 12693241 -76811312 + AluY SINE Alu 1 298 -13 3912 158 16 40 chr17 12693241 12693307 -76811246 + L1MB7 LINE L1 6105 6171 -13 243 185 19 0 chr17 12693307 12693361 -76811192 + MER113 DNA MER1_type? 210 264 -257 263 216 118 108 chr17 12693730 12693934 -76810619 - L1MC4 LINE L1 -1 8041 7836 2059 139 0 7 chr17 12693972 12694267 -76810286 - AluSx SINE Alu -19 293 1 681 244 13 0 chr17 12694292 12694448 -76810105 - L1ME2 LINE L1 -10 6154 5997 2097 132 0 0 chr17 12694510 12694806 -76809747 - AluSx SINE Alu -16 296 1 271 241 25 0 chr17 12694991 12695070 -76809483 - L1ME2 LINE L1 -383 5738 5658 1940 147 3 3 chr17 12695091 12695384 -76809169 + AluSx SINE Alu 1 293 -19 2323 94 3 0 chr17 12695772 12696069 -76808484 + AluSp SINE Alu 1 298 -15 1822 123 168 26 chr17 12696466 12696806 -76807747 - MLT1B LTR MaLR 0 390 3 195 114 0 0 chr17 12697105 12697140 -76807413 + (TA)n Simple_repeat Simple_repeat 1 35 0 2085 97 3 40 chr17 12697140 12697440 -76807113 - AluSx SINE Alu -23 289 1 387 0 0 0 chr17 12697471 12697514 -76807039 + (TG)n Simple_repeat Simple_repeat 2 44 0 226 273 246 0 chr17 12698402 12698512 -76806041 - MER5A DNA MER1_type -3 186 50 406 272 111 112 chr17 12698816 12699738 -76804815 + L1M2 LINE L1 530 1374 -5475 201 74 0 0 chr17 12699908 12699935 -76804618 + (A)n Simple_repeat Simple_repeat 1 27 0 294 280 13 0 chr17 12701059 12701134 -76803419 - L2 LINE L2 -301 2971 2896 194 263 70 18 chr17 12701762 12701819 -76802734 - L2 LINE L2 -5 3267 3208 449 290 161 18 chr17 12701893 12702117 -76802436 + MIR SINE MIR 7 262 0 481 276 39 54 chr17 12703322 12703525 -76801028 + MIR SINE MIR 17 216 -46 203 182 91 45 chr17 12704678 12704744 -76799809 - MIR SINE MIR -67 195 127 452 266 84 0 chr17 12706177 12706320 -76798233 - MIR SINE MIR -36 226 72 232 221 325 0 chr17 12707109 12707186 -76797367 - MIR SINE MIR -68 140 39 21 89 0 0 chr17 12707505 12707561 -76796992 + AT_rich Low_complexity Low_complexity 1 56 0 1437 143 129 49 chr17 12707833 12708119 -76796434 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 12708784 12708806 -76795747 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 12710171 12710199 -76794354 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 12710615 12710636 -76793917 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 12710880 12710908 -76793645 + AT_rich Low_complexity Low_complexity 1 28 0 1859 163 14 0 chr17 12711023 12711312 -76793241 - AluJo SINE Alu -19 293 1 1323 182 14 5 chr17 12712044 12712264 -76792289 - AluJo SINE Alu -90 222 1 220 336 84 8 chr17 12712721 12712840 -76791713 - L2 LINE L2 -4 3309 3182 2226 98 7 0 chr17 12713412 12713709 -76790844 + AluSp SINE Alu 1 299 -14 23 0 0 0 chr17 12713721 12713744 -76790809 + AT_rich Low_complexity Low_complexity 1 23 0 825 208 71 0 chr17 12716832 12717000 -76787553 - MIR SINE MIR -21 241 62 1461 229 88 41 chr17 12717563 12718202 -76786351 - L1MC5 LINE L1 -37 7924 7256 283 304 100 26 chr17 12719698 12719928 -76784625 + HsTC2 DNA Tc2 566 812 -1086 2230 96 48 0 chr17 12720075 12720367 -76784186 + AluSq SINE Alu 1 306 -7 1300 146 28 5 chr17 12720626 12720838 -76783715 + AluJb SINE Alu 87 303 -9 2529 51 0 0 chr17 12720942 12721236 -76783317 + AluY SINE Alu 1 294 -17 2404 185 49 130 chr17 12721530 12722339 -76782214 - MER21B LTR ERV1 -107 756 13 1595 143 47 53 chr17 12722719 12723041 -76781512 - MER21A LTR ERV1 -6 925 606 924 158 55 18 chr17 12723038 12723203 -76781350 - MER21B LTR ERV1 -692 171 1 * 577 262 34 30 chr17 12725528 12725720 -76778833 - MIR SINE MIR -57 205 18 219 329 81 34 chr17 12725940 12726089 -76778464 - MIR SINE MIR -1 261 106 845 168 0 0 chr17 12726213 12726344 -76778209 - FLAM_C SINE Alu -2 131 1 2233 98 0 0 chr17 12726814 12727133 -76777420 - AluSq SINE Alu 0 319 1 1083 244 19 40 chr17 12727739 12728063 -76776490 - MLT1H LTR MaLR -230 319 3 196 289 0 67 chr17 12728439 12728529 -76776024 - L2 LINE L2 -4 3268 3185 252 239 0 0 chr17 12729446 12729492 -76775061 - LTR67 LTR ERVL -6 551 506 189 260 41 55 chr17 12729533 12729606 -76774947 - L2 LINE L2 -1 3271 3200 369 256 34 26 chr17 12730936 12731053 -76773500 - MLT1D LTR MaLR -387 118 1 526 223 42 58 chr17 12731053 12731254 -76773299 - MLT1D-int LTR MaLR 0 1727 1237 295 152 0 0 chr17 12731252 12731298 -76773255 - MLT1D-int LTR MaLR -339 1032 987 * 412 278 138 41 chr17 12735599 12736034 -76768519 - HAL1 LINE L1 -1030 1477 1001 201 209 30 104 chr17 12736269 12736336 -76768217 - MIR SINE MIR -181 81 20 884 135 0 0 chr17 12736408 12736541 -76768012 - FLAM_C SINE Alu 0 133 1 598 188 122 83 chr17 12736708 12736996 -76767557 - L1MC5 LINE L1 -32 7929 7631 1714 146 45 17 chr17 12738072 12738360 -76766193 + AluJb SINE Alu 1 296 -16 270 81 0 0 chr17 12738905 12738942 -76765611 + (TG)n Simple_repeat Simple_repeat 1 37 0 2316 170 20 27 chr17 12738970 12739457 -76765096 - L1MB3 LINE L1 0 6183 5700 260 250 113 0 chr17 12740084 12740164 -76764389 - HAL1 LINE L1 -384 2123 2035 780 237 83 111 chr17 12740177 12740518 -76764035 - HAL1 LINE L1 -538 1969 1649 1642 161 39 7 chr17 12740518 12740803 -76763750 - AluJo SINE Alu -18 294 1 780 237 83 111 chr17 12740803 12741039 -76763514 - HAL1 LINE L1 -858 1649 1408 211 354 0 0 chr17 12741056 12741121 -76763432 + C-rich Low_complexity Low_complexity 4 68 0 240 200 71 0 chr17 12741121 12741191 -76763362 - HAL1 LINE L1 -1130 1377 1303 1561 217 72 60 chr17 12741230 12741867 -76762686 + L1ME2 LINE L1 4561 5205 -941 1892 157 4 0 chr17 12741867 12742147 -76762406 + AluSq SINE Alu 1 281 -32 222 171 0 0 chr17 12742182 12742223 -76762330 + GA-rich Low_complexity Low_complexity 1 41 0 2957 231 42 27 chr17 12742223 12742317 -76762236 + L1ME2 LINE L1 5211 5302 -862 963 194 227 12 chr17 12742317 12742559 -76761994 - AluJo SINE Alu -8 294 1 2957 231 42 27 chr17 12742559 12743400 -76761153 + L1ME2 LINE L1 5302 6162 -2 306 0 0 0 chr17 12743435 12743469 -76761084 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2261 106 0 3 chr17 12743473 12743776 -76760777 - AluSx SINE Alu -10 302 1 939 97 15 0 chr17 12743776 12743910 -76760643 - AluSq/x SINE Alu -176 136 1 388 239 42 125 chr17 12744585 12744706 -76759847 - L1MC4a LINE L1 -1882 5926 5837 1753 140 16 42 chr17 12744706 12744872 -76759681 - AluSx SINE Alu -8 304 148 2334 32 43 0 chr17 12744872 12745153 -76759400 - AluY SINE Alu -18 293 1 1753 140 16 42 chr17 12745153 12745294 -76759259 - AluSx SINE Alu -164 148 5 388 239 42 125 chr17 12745294 12745436 -76759117 - L1MC4a LINE L1 -1971 5837 5685 400 219 12 21 chr17 12745537 12745697 -76758856 - MER20 DNA MER1_type -5 214 1 536 332 41 108 chr17 12745918 12747337 -76757216 - L2 LINE L2 -1 3271 1947 558 0 0 0 chr17 12748067 12748129 -76756424 + (TA)n Simple_repeat Simple_repeat 2 63 0 519 237 0 10 chr17 12748835 12748932 -76755621 + MER58A DNA MER1_type 6 101 -6 416 147 80 0 chr17 12748934 12749009 -76755544 + MER58A DNA MER1_type 144 224 0 830 232 140 48 chr17 12749019 12749398 -76755155 - MLT1C LTR MaLR 0 467 54 432 241 0 35 chr17 12750356 12750472 -76754081 + L3 LINE CR1 333 444 -1133 651 201 28 14 chr17 12751792 12751936 -76752617 - L1MA10 LINE L1 -10 6324 6179 2221 103 0 3 chr17 12751947 12752248 -76752305 - AluSg SINE Alu -10 300 1 2349 270 94 15 chr17 12752253 12753175 -76751378 - L1MEc LINE L1 -5346 1050 56 423 0 0 0 chr17 12754456 12754503 -76750050 + (TG)n Simple_repeat Simple_repeat 2 48 0 229 143 41 0 chr17 12755019 12755068 -76749485 + (TG)n Simple_repeat Simple_repeat 2 52 0 542 96 0 0 chr17 12755272 12755345 -76749208 - U3 snRNA snRNA -144 73 1 319 297 22 0 chr17 12755388 12755479 -76749074 - MER20B DNA MER1_type -626 157 65 691 266 65 47 chr17 12755553 12755831 -76748722 - MLT1J LTR MaLR 0 511 229 1250 200 61 61 chr17 12755929 12756289 -76748264 - MLT1B LTR MaLR -27 363 4 381 233 35 17 chr17 12756292 12756408 -76748145 - MLT1J LTR MaLR -393 118 1 982 111 26 0 chr17 12756556 12756709 -76747844 - L1MA2 LINE L1 0 6304 6148 443 228 44 63 chr17 12757239 12757397 -76747156 - L1MB8 LINE L1 -2 6176 6022 777 255 6 6 chr17 12757592 12757753 -76746800 - MLT1E LTR MaLR -432 161 1 400 343 48 12 chr17 12758908 12759074 -76745479 + MER5B DNA MER1_type 1 172 -6 2086 106 7 3 chr17 12765003 12765324 -76739229 - AluSx SINE Alu 0 322 1 198 0 0 0 chr17 12765793 12765815 -76738738 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 197 114 49 57 chr17 12766581 12766704 -76737849 + (TATAA)n Simple_repeat Simple_repeat 3 124 0 * 265 68 120 0 chr17 12766674 12766791 -76737762 + (TA)n Simple_repeat Simple_repeat 1 131 0 2436 69 0 3 chr17 12767085 12767388 -76737165 - AluY SINE Alu -9 302 1 23 33 0 0 chr17 12770374 12770404 -76734149 + AT_rich Low_complexity Low_complexity 1 30 0 2446 58 0 0 chr17 12770921 12771212 -76733341 + AluY SINE Alu 1 291 -20 181 211 0 0 chr17 12772555 12772593 -76731960 + MIR SINE MIR 107 144 -118 30 0 0 0 chr17 12772800 12772830 -76731723 + AT_rich Low_complexity Low_complexity 1 30 0 327 25 0 0 chr17 12774065 12774105 -76730448 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 42 0 0 chr17 12774241 12774265 -76730288 + (C)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr17 12774863 12774885 -76729668 + AT_rich Low_complexity Low_complexity 1 22 0 355 309 86 7 chr17 12775804 12775956 -76728597 - MIR SINE MIR -43 219 56 2247 105 0 0 chr17 12776374 12776669 -76727884 + AluSg SINE Alu 1 295 -15 186 191 0 0 chr17 12776670 12776712 -76727841 + (TA)n Simple_repeat Simple_repeat 1 42 0 23 0 0 0 chr17 12777060 12777083 -76727470 + AT_rich Low_complexity Low_complexity 1 23 0 2630 152 46 29 chr17 12777089 12777615 -76726938 - L1PB4 LINE L1 -14 6142 5608 5432 238 57 49 chr17 12778237 12781215 -76723338 - L1ME1 LINE L1 -6 6160 3161 180 0 0 0 chr17 12781216 12781236 -76723317 + (A)n Simple_repeat Simple_repeat 1 20 0 1579 175 0 25 chr17 12781238 12781523 -76723030 - AluJo SINE Alu -34 278 1 326 264 24 48 chr17 12781532 12781657 -76722896 - L1ME1 LINE L1 -2959 3187 3066 327 348 50 58 chr17 12781896 12782295 -76722258 - L1ME3A LINE L1 -222 5948 5553 233 232 145 0 chr17 12782366 12782435 -76722118 - MLT1J LTR MaLR -201 310 232 277 258 77 44 chr17 12783027 12783209 -76721344 - L1ME3A LINE L1 -1107 5039 4852 381 277 127 27 chr17 12783309 12783641 -76720912 - L1ME3A LINE L1 -1447 4699 4335 195 228 41 98 chr17 12783747 12783870 -76720683 - L3 LINE CR1 -75 1502 1387 329 310 148 25 chr17 12784115 12784318 -76720235 - MIR SINE MIR -34 228 1 21 0 0 0 chr17 12784766 12784787 -76719766 + AT_rich Low_complexity Low_complexity 1 21 0 466 315 74 25 chr17 12785319 12785522 -76719031 - L2 LINE L2 -92 3221 3009 210 118 0 0 chr17 12785544 12785578 -76718975 + (T)n Simple_repeat Simple_repeat 1 34 0 35 71 0 0 chr17 12786965 12787035 -76717518 + AT_rich Low_complexity Low_complexity 1 70 0 512 316 156 5 chr17 12787178 12787396 -76717157 - MIR SINE MIR -1 261 11 1081 166 43 11 chr17 12788022 12788209 -76716344 + AluJo SINE Alu 1 193 -119 21 57 0 0 chr17 12788277 12788312 -76716241 + AT_rich Low_complexity Low_complexity 1 35 0 209 292 0 0 chr17 12789617 12789682 -76714871 + T-rich Low_complexity Low_complexity 1 65 0 269 252 84 19 chr17 12789899 12790006 -76714547 - MLT1L LTR MaLR -6 609 496 2190 112 3 10 chr17 12790358 12790662 -76713891 + AluSx SINE Alu 1 302 -10 270 0 0 0 chr17 12792564 12792594 -76711959 + (TG)n Simple_repeat Simple_repeat 2 31 0 1666 135 56 0 chr17 12793432 12793698 -76710855 - Tigger3b DNA MER2_type 0 1232 952 4576 126 152 2 chr17 12794415 12795256 -76709297 - Tigger3b DNA MER2_type -262 969 3 420 242 27 0 chr17 12795285 12795409 -76709144 - L1MC4 LINE L1 -152 7890 7654 16982 122 14 40 chr17 12795424 12797346 -76707207 + Tigger4(Zombi) DNA MER2_type 5 1974 -757 5459 110 30 29 chr17 12797346 12798346 -76706207 + L1PA13 LINE L1 5164 6161 -2 2101 121 3 34 chr17 12798355 12798677 -76705876 + AluSx SINE Alu 1 312 0 16982 122 14 40 chr17 12798677 12799542 -76705011 + Tigger4(Zombi) DNA MER2_type 1982 2731 0 1198 22 0 0 chr17 12799634 12799771 -76704782 + AluY SINE Alu 165 301 -10 246 298 101 22 chr17 12799823 12800001 -76704552 - L1MC4 LINE L1 -446 7596 7405 3636 256 126 19 chr17 12800064 12800192 -76704361 - L1M4 LINE L1 -1623 4523 4410 2681 99 73 11 chr17 12800192 12800628 -76703925 + MER4C LTR ERV1 1 463 -2 3636 256 126 19 chr17 12800628 12802189 -76702364 - L1M4 LINE L1 -1736 4410 2653 2361 79 0 7 chr17 12802846 12803150 -76701403 - AluY SINE Alu -8 303 2 1305 132 129 20 chr17 12804064 12804374 -76700179 - MSTA LTR MaLR 0 364 1 1838 163 22 47 chr17 12804548 12804911 -76699642 - MLT1A1 LTR MaLR -11 354 1 2371 80 0 0 chr17 12806251 12806553 -76698000 - AluY SINE Alu -9 302 1 238 325 12 24 chr17 12807786 12807869 -76696684 - MER5A DNA MER1_type -2 187 106 753 235 17 0 chr17 12809122 12809301 -76695252 + MER106A DNA MER1_type 2 183 -53 2080 124 16 7 chr17 12809414 12809721 -76694832 - AluSg SINE Alu 0 310 1 1571 250 75 36 chr17 12809808 12810725 -76693828 + L1ME3A LINE L1 5039 5987 -183 2668 109 55 63 chr17 12810831 12811247 -76693306 - MER84 LTR ERVI 0 507 93 2114 119 0 0 chr17 12811247 12811558 -76692995 - AluSx SINE Alu 0 311 1 2668 109 55 63 chr17 12811558 12811645 -76692908 - MER84 LTR ERVI -414 93 7 400 132 40 13 chr17 12811645 12811721 -76692832 - MER84 LTR ERVI -429 78 1 1717 158 0 85 chr17 12813074 12813252 -76691301 - AluJb SINE Alu -11 301 162 2209 101 16 0 chr17 12813252 12813560 -76690993 - AluSp SINE Alu 0 313 1 1717 158 0 85 chr17 12813560 12813710 -76690843 - AluJb SINE Alu -150 162 1 2117 121 0 0 chr17 12813733 12814022 -76690531 - AluSx SINE Alu -19 293 5 357 225 200 4 chr17 12814395 12814635 -76689918 + L1MEd LINE L1 739 1025 -5094 442 210 145 8 chr17 12814640 12814764 -76689789 + MER3 DNA MER1_type 10 150 -59 220 300 43 14 chr17 12815312 12815382 -76689171 + L2 LINE L2 3201 3272 0 534 302 119 41 chr17 12815543 12815930 -76688623 + L1MEd LINE L1 818 1234 -4885 29 28 0 0 chr17 12815977 12816013 -76688540 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr17 12816069 12816092 -76688461 + AT_rich Low_complexity Low_complexity 1 23 0 230 344 6 38 chr17 12816155 12816312 -76688241 + HAL1 LINE L1 1450 1601 -906 2485 137 51 12 chr17 12816387 12816802 -76687751 - Tigger2a DNA MER2_type -3 431 1 547 292 72 11 chr17 12816839 12817233 -76687320 - LTR16A LTR ERVL 0 450 1 23 54 0 0 chr17 12817688 12817725 -76686828 + AT_rich Low_complexity Low_complexity 1 37 0 292 319 83 25 chr17 12822786 12822943 -76681610 - MIR SINE MIR -54 208 43 1074 136 41 0 chr17 12823298 12823467 -76681086 - AluSp SINE Alu -4 309 134 2168 121 10 16 chr17 12823468 12823782 -76680771 - AluSq SINE Alu -1 312 1 2039 131 3 3 chr17 12824680 12824977 -76679576 - AluSq SINE Alu -16 297 1 250 268 54 18 chr17 12825155 12825267 -76679286 + MARNA DNA Mariner 240 355 -231 305 204 159 0 chr17 12825623 12825736 -76678817 - MIR SINE MIR -54 208 78 2847 71 23 18 chr17 12825772 12826168 -76678385 + L1PB1 LINE L1 5754 6151 0 270 350 127 27 chr17 12826192 12826492 -76678061 - L2 LINE L2 -455 2859 2530 233 344 43 54 chr17 12826574 12826760 -76677793 + L2 LINE L2 2867 3050 -222 2597 11 0 0 chr17 12827343 12827625 -76676928 + AluYa5 SINE Alu 24 305 -6 239 270 0 0 chr17 12827682 12827745 -76676808 + MARNA DNA Mariner 312 374 -212 624 278 80 57 chr17 12827903 12828292 -76676261 + L1MEd LINE L1 318 715 -5404 22406 179 20 17 chr17 12828298 12833712 -76670841 + L1P4 LINE L1 7 6537 -1075 1750 149 0 44 chr17 12833712 12834051 -76670502 + AluSx SINE Alu 1 326 0 22406 179 20 17 chr17 12834051 12834742 -76669811 + L1P4 LINE L1 6537 7224 -388 1172 100 77 18 chr17 12834742 12834912 -76669641 + AluSg/x SINE Alu 133 312 0 452 194 194 69 chr17 12834913 12835145 -76669408 + L1MEd LINE L1 701 961 -5158 6219 151 39 43 chr17 12835550 12835750 -76668803 - L1MA4 LINE L1 -4 6296 6097 2375 157 51 10 chr17 12835750 12836159 -76668394 + MSTB LTR MaLR 1 426 0 6219 151 39 43 chr17 12836159 12837907 -76666646 - L1MA4 LINE L1 -203 6097 4359 1960 142 4 0 chr17 12837907 12838219 -76666334 - AluSx SINE Alu 0 313 1 6219 151 39 43 chr17 12838219 12838721 -76665832 - L1MA4 LINE L1 -1941 4359 3856 729 283 122 31 chr17 12838816 12839421 -76665132 - L1ME LINE L1 -339 5823 5161 2327 79 3 0 chr17 12839491 12839783 -76664770 + AluSp SINE Alu 1 293 -20 25 31 0 0 chr17 12839820 12839852 -76664701 + AT_rich Low_complexity Low_complexity 1 32 0 5584 117 15 0 chr17 12839852 12840500 -76664053 - L1PA16 LINE L1 -9 6157 5520 207 0 0 0 chr17 12840500 12840523 -76664030 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1898 117 34 0 chr17 12840524 12840790 -76663763 - AluSc SINE Alu -31 278 4 5584 117 15 0 chr17 12840790 12841478 -76663075 - L1PA16 LINE L1 -645 5521 4802 616 258 79 35 chr17 12841481 12841884 -76662669 - L1ME LINE L1 -1092 5054 4634 * 2314 191 44 68 chr17 12841877 12842556 -76661997 - L1MB8 LINE L1 -6 6983 6321 1000 259 104 0 chr17 12842605 12842914 -76661639 - L1MB8 LINE L1 -1124 5833 5493 2432 153 24 24 chr17 12842916 12843340 -76661213 - MSTB LTR MaLR 0 426 3 8331 165 51 24 chr17 12843341 12844945 -76659608 - MSTB-int LTR MaLR 0 1651 5 379 141 0 0 chr17 12844949 12845013 -76659540 - MSTB LTR MaLR 0 426 363 1807 140 44 44 chr17 12845045 12845410 -76659143 - MSTB LTR MaLR -49 377 13 3080 224 121 97 chr17 12845416 12845718 -76658835 - L1MB8 LINE L1 -1463 5494 5201 2058 152 0 9 chr17 12845718 12846033 -76658520 - AluSx SINE Alu 0 312 1 3080 224 121 97 chr17 12846033 12846074 -76658479 - L1MB8 LINE L1 -1756 5201 5162 732 74 0 0 chr17 12846074 12846182 -76658371 + (TTCC)n Simple_repeat Simple_repeat 4 111 0 1789 142 7 11 chr17 12846186 12846461 -76658092 - AluJb SINE Alu -38 274 1 3080 224 121 97 chr17 12846461 12846651 -76657902 - L1MB8 LINE L1 -1797 5160 4976 1770 171 0 21 chr17 12846651 12846969 -76657584 - AluSx SINE Alu 0 312 1 3080 224 121 97 chr17 12846969 12847041 -76657512 - L1MB8 LINE L1 -1981 4976 4907 985 89 0 0 chr17 12847041 12847165 -76657388 - AluSp SINE Alu -189 124 1 3080 224 121 97 chr17 12847165 12848394 -76656159 - L1MB8 LINE L1 -2050 4907 3480 368 203 93 17 chr17 12848398 12848516 -76656037 - L1MB8 LINE L1 -6659 200 74 * 2295 167 20 28 chr17 12848512 12848785 -76655768 - L1MA7 LINE L1 -237 6054 5780 908 92 43 0 chr17 12848785 12848949 -76655604 + CT-rich Low_complexity Low_complexity 2 172 0 1829 112 58 0 chr17 12848949 12849208 -76655345 - AluSc SINE Alu -35 274 1 2295 167 20 28 chr17 12849208 12849436 -76655117 - L1MA7 LINE L1 -509 5782 5556 1795 214 50 55 chr17 12849434 12850562 -76653991 - L1M4c LINE L1 -4694 2265 1182 * 518 219 0 19 chr17 12850562 12850667 -76653886 - FRAM SINE Alu -73 103 1 521 251 143 44 chr17 12850734 12850788 -76653765 - L1M4 LINE L1 -2742 3404 3357 2438 75 3 0 chr17 12850788 12851083 -76653470 - AluY SINE Alu -15 296 1 521 251 143 44 chr17 12851083 12851647 -76652906 - L1M4 LINE L1 -2789 3357 2697 2119 128 0 14 chr17 12851647 12851944 -76652609 + AluSp SINE Alu 1 293 -20 521 251 143 44 chr17 12851944 12852074 -76652479 - L1M4 LINE L1 -3449 2697 2581 762 149 0 8 chr17 12852115 12852249 -76652304 + L1PA16 LINE L1 5592 5724 -442 1711 177 16 0 chr17 12852252 12852562 -76651991 + L1PA16 LINE L1 5846 6160 -6 2112 110 11 0 chr17 12852901 12853183 -76651370 - AluSc SINE Alu -24 285 1 269 264 63 52 chr17 12853402 12853671 -76650882 + L1ME3A LINE L1 3346 3617 -2529 2449 70 3 0 chr17 12853687 12853985 -76650568 - AluY SINE Alu -12 299 1 357 300 95 42 chr17 12854000 12854263 -76650290 + L1ME3A LINE L1 4800 5076 -1070 399 239 81 143 chr17 12854264 12854357 -76650196 + L1ME3A LINE L1 5258 5355 -815 2066 113 27 7 chr17 12854357 12854649 -76649904 - AluSx SINE Alu -14 298 1 399 239 81 143 chr17 12854649 12855295 -76649258 + L1ME3A LINE L1 5355 5951 -219 1951 159 10 0 chr17 12855450 12855758 -76648795 - AluJb SINE Alu -1 311 1 517 128 23 0 chr17 12855890 12855976 -76648577 + L1M4c LINE L1 15 102 -6282 2063 112 14 0 chr17 12855981 12856267 -76648286 + AluSq SINE Alu 1 290 -23 740 128 0 40 chr17 12856276 12856401 -76648152 + Tigger1 DNA MER2_type 2299 2418 0 1722 165 0 21 chr17 12856416 12856701 -76647852 - AluJo SINE Alu -33 279 1 349 132 105 0 chr17 12856708 12856784 -76647769 + L1MB4 LINE L1 6097 6180 0 387 358 12 19 chr17 12857529 12857691 -76646862 + L1M4c LINE L1 309 469 -5903 207 352 44 0 chr17 12857784 12857875 -76646678 + MIR SINE MIR 20 114 -148 3774 24 20 0 chr17 12857882 12858334 -76646219 - L1PA4 LINE L1 -3 6152 5692 491 206 71 28 chr17 12858208 12858349 -76646204 - L1ME LINE L1 -297 5824 5678 690 262 116 30 chr17 12858747 12858980 -76645573 + MIR SINE MIR 8 260 -2 363 344 23 8 chr17 12859130 12859261 -76645292 - MIR3 SINE MIR -39 169 37 1313 270 85 4 chr17 12859592 12860085 -76644468 + L2 LINE L2 2173 2705 -609 2051 102 0 64 chr17 12860095 12860409 -76644144 + AluSg SINE Alu 1 294 -16 1166 226 4 9 chr17 12860503 12860733 -76643820 + MLT1A1 LTR MaLR 1 229 -136 314 236 0 0 chr17 12860732 12860787 -76643766 - Tigger3b DNA MER2_type -1176 55 1 * 472 159 396 0 chr17 12860787 12860864 -76643689 - L1M4b LINE L1 -1982 4975 4930 1944 86 4 8 chr17 12860864 12861119 -76643434 - AluSx SINE Alu -58 254 1 472 159 396 0 chr17 12861119 12861223 -76643330 - L1M4b LINE L1 -2027 4930 4722 1604 275 60 7 chr17 12861259 12861724 -76642829 - MER21B LTR ERV1 -62 801 312 2193 89 18 4 chr17 12861727 12862027 -76642526 - AluSx SINE Alu 0 304 1 2421 83 3 0 chr17 12862131 12862431 -76642122 + AluSx SINE Alu 1 301 -11 1060 199 29 126 chr17 12862431 12862772 -76641781 - MER21B LTR ERV1 -555 308 1 3497 244 26 88 chr17 12862772 12863096 -76641457 - L1M4b LINE L1 -2234 4723 4380 333 0 0 0 chr17 12863096 12863133 -76641420 + (TG)n Simple_repeat Simple_repeat 2 38 0 3497 244 26 88 chr17 12863133 12864536 -76640017 - L1M4b LINE L1 -2577 4380 2891 2019 144 10 3 chr17 12864536 12864834 -76639719 - AluJb SINE Alu -12 300 1 3497 244 26 88 chr17 12864834 12864845 -76639708 - L1M4b LINE L1 -4066 2891 2881 1466 131 58 4 chr17 12864845 12865105 -76639448 - L1MA3 LINE L1 -2 6303 6030 3497 244 26 88 chr17 12865105 12865636 -76638917 - L1M4b LINE L1 -4076 2881 2471 6407 230 50 46 chr17 12865814 12867537 -76637016 - L1M4b LINE L1 -4543 2416 701 1438 171 80 85 chr17 12867537 12867935 -76636618 - MSTD LTR MaLR 0 396 1 6407 230 50 46 chr17 12867935 12868374 -76636179 - L1M4b LINE L1 -6258 701 208 2402 63 3 10 chr17 12868374 12868674 -76635879 + AluY SINE Alu 1 298 -13 6407 230 50 46 chr17 12868674 12868870 -76635683 - L1M4b LINE L1 -6751 208 14 279 93 0 0 chr17 12868934 12868977 -76635576 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 2100 142 0 3 chr17 12869056 12869367 -76635186 + AluSx SINE Alu 1 310 -2 733 312 73 30 chr17 12869407 12869996 -76634557 - L1M4 LINE L1 -1918 4228 3666 285 29 0 0 chr17 12869996 12870030 -76634523 + (TG)n Simple_repeat Simple_repeat 1 34 0 733 312 73 30 chr17 12870030 12870519 -76634034 - L1M4 LINE L1 -2480 3666 3103 388 194 271 21 chr17 12870820 12870964 -76633589 + MER5A DNA MER1_type 9 188 -1 298 329 12 0 chr17 12870964 12871040 -76633513 - MIR3 SINE MIR -50 158 82 239 226 0 48 chr17 12871070 12871132 -76633421 + GA-rich Low_complexity Low_complexity 2 60 0 287 297 35 48 chr17 12871964 12872109 -76632444 + L2 LINE L2 2245 2387 -927 3246 92 2 33 chr17 12872497 12872985 -76631568 + L1PB1 LINE L1 5679 6151 0 558 231 0 0 chr17 12873480 12873649 -76630904 + (TG)n Simple_repeat Simple_repeat 1 169 0 401 283 7 0 chr17 12873666 12873818 -76630735 + (TG)n Simple_repeat Simple_repeat 2 154 0 2590 62 0 0 chr17 12874482 12874786 -76629767 - AluY SINE Alu -7 304 1 181 243 0 0 chr17 12875048 12875085 -76629468 + L2 LINE L2 3005 3041 -272 2376 164 48 40 chr17 12875152 12875422 -76629131 + MER66B LTR ERV1 7 285 -201 2015 146 0 0 chr17 12875422 12875752 -76628801 + AluSx SINE Alu 1 330 0 2376 164 48 40 chr17 12875752 12875956 -76628597 + MER66B LTR ERV1 285 486 0 2414 91 0 3 chr17 12876074 12876383 -76628170 + AluSg SINE Alu 1 308 -2 317 239 55 64 chr17 12876621 12876730 -76627823 - L2 LINE L2 -2 3311 3204 980 237 30 92 chr17 12876795 12877133 -76627420 + MER102b DNA MER1_type 15 331 -10 2283 192 45 18 chr17 12878078 12878567 -76625986 + L1ME1 LINE L1 5538 6039 -127 736 212 30 30 chr17 12878565 12878665 -76625888 - L1M4 LINE L1 -1108 5038 4939 * 234 0 0 0 chr17 12878665 12878691 -76625862 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 736 212 30 30 chr17 12878691 12878793 -76625760 - L1M4 LINE L1 -1206 4940 4836 735 261 44 4 chr17 12878921 12879147 -76625406 - MIR SINE MIR -1 261 27 194 256 0 0 chr17 12879185 12879224 -76625329 + MIR SINE MIR 217 255 -7 181 281 0 67 chr17 12879553 12879642 -76624911 + MIR SINE MIR 109 191 -71 351 257 35 44 chr17 12880179 12880292 -76624261 - L2 LINE L2 0 3272 3161 2288 151 6 0 chr17 12880856 12881206 -76623347 + MLT1A1 LTR MaLR 14 365 0 873 161 39 39 chr17 12881224 12881429 -76623124 - L1MB4 LINE L1 0 6180 5976 1626 181 38 0 chr17 12881670 12881957 -76622596 - AluJo SINE Alu -3 309 12 1965 144 3 3 chr17 12881994 12882285 -76622268 - AluJb SINE Alu -21 291 1 1944 96 8 15 chr17 12882737 12882998 -76621555 - AluSc SINE Alu -11 298 40 180 111 0 0 chr17 12882998 12883025 -76621528 + (T)n Simple_repeat Simple_repeat 1 27 0 1830 189 3 0 chr17 12883025 12883358 -76621195 - L1MC3 LINE L1 0 7785 7452 2429 89 3 0 chr17 12883388 12883690 -76620863 + AluSp SINE Alu 1 303 -10 209 304 0 14 chr17 12883739 12883808 -76620745 - L2 LINE L2 -203 3069 3002 2439 97 0 0 chr17 12884036 12884347 -76620206 - AluSq SINE Alu -2 311 1 2411 69 0 13 chr17 12885299 12885602 -76618951 - AluY SINE Alu -11 300 2 482 308 87 21 chr17 12885892 12886181 -76618372 + L2 LINE L2 2852 3159 -154 271 160 13 40 chr17 12886188 12886263 -76618290 + (TA)n Simple_repeat Simple_repeat 1 73 0 903 211 97 0 chr17 12886263 12886448 -76618105 - AluJo SINE Alu -23 289 87 180 111 0 0 chr17 12886529 12886556 -76617997 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 193 330 68 10 chr17 12886753 12886856 -76617697 - L2 LINE L2 -227 3045 2937 2090 256 56 42 chr17 12886856 12887590 -76616963 + HsTC2a DNA MER2_type 1 744 0 542 242 0 6 chr17 12888567 12888724 -76615829 + CT-rich Low_complexity Low_complexity 1 156 0 378 276 10 0 chr17 12889056 12889154 -76615399 - MIR SINE MIR -56 152 54 2135 142 0 0 chr17 12889710 12890019 -76614534 - AluSx SINE Alu -3 309 1 749 158 7 7 chr17 12890120 12890259 -76614294 + MIR SINE MIR 65 203 -59 273 200 0 17 chr17 12890311 12890371 -76614182 - L1MEd LINE L1 -4868 1251 1193 2095 157 19 50 chr17 12890403 12890555 -76613998 + MLT1A1 LTR MaLR 1 156 -209 2287 113 0 3 chr17 12890555 12890857 -76613696 + AluSx SINE Alu 1 301 -11 2095 157 19 50 chr17 12890857 12891081 -76613472 + MLT1A1 LTR MaLR 156 365 0 403 265 70 20 chr17 12891225 12891403 -76613150 + MLT1J2 LTR MaLR 1 154 -296 357 227 70 76 chr17 12891714 12891886 -76612667 + MLT1J LTR MaLR 325 495 -16 23 54 0 0 chr17 12891956 12891993 -76612560 + AT_rich Low_complexity Low_complexity 1 37 0 1013 83 0 0 chr17 12892195 12892316 -76612237 + AluSp SINE Alu 103 223 -90 1859 171 42 90 chr17 12892587 12892852 -76611701 - MLT1C LTR MaLR -32 435 200 2093 142 0 3 chr17 12892852 12893148 -76611405 - AluSx SINE Alu -17 295 1 1859 171 42 90 chr17 12893148 12893339 -76611214 - MLT1C LTR MaLR -267 200 1 216 289 0 0 chr17 12894274 12894326 -76610227 + MIR SINE MIR 88 139 -69 329 109 22 0 chr17 12894400 12894446 -76610107 - AluSp SINE Alu -135 168 122 1610 168 119 6 chr17 12895524 12895852 -76608701 + MLT1A1 LTR MaLR 1 365 0 1877 78 0 47 chr17 12895918 12896176 -76608377 + AluSg SINE Alu 1 246 -64 198 103 0 0 chr17 12896176 12896205 -76608348 + (A)n Simple_repeat Simple_repeat 1 29 0 398 242 60 1 chr17 12897079 12897198 -76607355 + MIR3 SINE MIR 72 200 -8 23 0 0 0 chr17 12897672 12897695 -76606858 + AT_rich Low_complexity Low_complexity 1 23 0 1757 211 96 19 chr17 12897716 12898185 -76606368 + MLT1D LTR MaLR 1 505 0 2328 186 9 9 chr17 12898474 12898894 -76605659 - LTR9B LTR ERV1 0 644 225 8309 109 161 28 chr17 12898897 12900394 -76604159 + pTR5 LTR ERV1 743 2438 0 760 231 28 28 chr17 12900399 12900611 -76603942 - LTR9B LTR ERV1 -426 218 7 2494 86 0 6 chr17 12901121 12901436 -76603117 - AluSq SINE Alu 0 313 1 311 320 25 8 chr17 12902413 12902535 -76602018 + MLT1J1 LTR MaLR 32 155 -291 368 261 117 18 chr17 12902589 12902700 -76601853 + MLT1I LTR MaLR 282 403 -6 497 309 44 58 chr17 12903884 12904363 -76600190 - L2 LINE L2 -38 3275 2804 2415 202 115 18 chr17 12904866 12904918 -76599635 - L1MA10 LINE L1 -7 6327 6281 2229 110 3 3 chr17 12904918 12905217 -76599336 + AluSx SINE Alu 1 299 -13 2415 202 115 18 chr17 12905217 12905763 -76598790 - L1MA10 LINE L1 -53 6281 5671 204 216 0 0 chr17 12906446 12906497 -76598056 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1311 181 83 28 chr17 12906524 12906812 -76597741 - MLT2B2 LTR ERVL -51 464 161 958 178 76 16 chr17 12906998 12907183 -76597370 - MLT2B2 LTR ERVL -319 196 1 252 294 12 24 chr17 12908164 12908249 -76596304 - MIR SINE MIR -102 106 23 550 186 0 0 chr17 12908407 12908504 -76596049 - MER53 DNA DNA -92 97 1 183 100 0 0 chr17 12909225 12909255 -76595298 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 1021 244 20 20 chr17 12909305 12909559 -76594994 + MIR SINE MIR 8 261 -1 282 257 0 14 chr17 12909701 12909771 -76594782 + MLT1L LTR MaLR 168 236 -379 505 294 113 5 chr17 12909856 12910077 -76594476 + MLT1L LTR MaLR 353 597 -18 1981 155 0 3 chr17 12910974 12911277 -76593276 + AluJb SINE Alu 1 302 -10 410 222 26 17 chr17 12911644 12911761 -76592792 - MIR SINE MIR -14 248 131 345 322 70 0 chr17 12911851 12911966 -76592587 - MIR SINE MIR -132 130 8 2278 102 0 28 chr17 12912642 12912964 -76591589 + AluSq SINE Alu 1 313 0 1178 218 45 37 chr17 12913920 12914300 -76590253 - LTR37A LTR ERV1 -2 424 42 24 32 0 0 chr17 12915891 12915922 -76588631 + AT_rich Low_complexity Low_complexity 1 31 0 2492 53 6 38 chr17 12916066 12916385 -76588168 + AluY SINE Alu 1 309 -2 3118 112 216 62 chr17 12917045 12917641 -76586912 - LTR12 LTR ERV1 0 688 1 2202 214 137 9 chr17 12918196 12918751 -76585802 - L1MD3 LINE L1 0 7995 7370 1061 150 6 12 chr17 12918912 12919085 -76585468 + FRAM SINE Alu 2 173 -3 198 0 0 0 chr17 12919841 12919863 -76584690 + (TC)n Simple_repeat Simple_repeat 1 22 0 2711 55 15 6 chr17 12919863 12920192 -76584361 - L1PA8 LINE L1 0 6172 5841 450 339 0 8 chr17 12920197 12920327 -76584226 - MIR SINE MIR -60 148 20 965 292 113 24 chr17 12922525 12923205 -76581348 - L1ME4a LINE L1 -41 6080 5328 2202 129 3 0 chr17 12923820 12924130 -76580423 - AluSx SINE Alu -1 311 1 322 260 128 25 chr17 12924495 12924691 -76579862 + L2 LINE L2 2141 2356 -958 2576 53 3 0 chr17 12925113 12925415 -76579138 - AluY SINE Alu -8 303 1 2301 101 7 7 chr17 12925675 12925981 -76578572 - AluSq SINE Alu -7 306 1 2312 97 3 0 chr17 12926718 12927017 -76577536 + AluSg SINE Alu 1 300 -10 1879 218 28 19 chr17 12927032 12927505 -76577048 + L1MEc LINE L1 40 516 -5880 886 207 73 17 chr17 12927618 12927797 -76576756 - AluJo SINE Alu -37 275 87 2230 108 3 25 chr17 12927820 12928135 -76576418 - AluSx SINE Alu -4 308 1 2456 181 40 11 chr17 12929017 12929546 -76575007 - MER74A LTR ERVL -12 546 3 1236 268 118 8 chr17 12931426 12931926 -76572627 - MLT1H1 LTR MaLR 0 555 1 325 195 35 13 chr17 12932559 12932672 -76571881 - MIR SINE MIR -61 147 70 2023 124 0 29 chr17 12932841 12933148 -76571405 - AluSx SINE Alu -14 298 1 211 367 27 27 chr17 12934139 12934289 -76570264 + L2 LINE L2 2919 3068 -204 44 0 0 0 chr17 12935816 12935860 -76568693 + AT_rich Low_complexity Low_complexity 1 44 0 441 346 33 5 chr17 12936118 12936320 -76568233 - MIR SINE MIR -34 228 20 306 291 240 11 chr17 12936773 12936948 -76567605 - MIR SINE MIR -45 217 3 749 223 63 6 chr17 12937090 12937265 -76567288 + MIR SINE MIR 66 250 -12 2418 89 0 0 chr17 12938501 12938804 -76565749 - AluSq SINE Alu -10 303 1 1853 154 48 34 chr17 12939090 12939448 -76565105 - L1MB3 LINE L1 -7 6176 5814 207 167 8 87 chr17 12939512 12939638 -76564915 + (TA)n Simple_repeat Simple_repeat 2 117 0 * 293 204 72 24 chr17 12939564 12939731 -76564822 + (CATAT)n Simple_repeat Simple_repeat 2 176 0 211 205 103 13 chr17 12939742 12939898 -76564655 + (CATAT)n Simple_repeat Simple_repeat 2 171 0 359 131 89 30 chr17 12940103 12940326 -76564227 + (CATAT)n Simple_repeat Simple_repeat 1 236 0 246 83 102 9 chr17 12940341 12940449 -76564104 + (CATAT)n Simple_repeat Simple_repeat 3 120 0 353 99 123 31 chr17 12940560 12940780 -76563773 + (CATAT)n Simple_repeat Simple_repeat 1 240 0 1734 25 5 0 chr17 12941288 12941488 -76563065 - L1PA4 LINE L1 -277 5878 5678 2157 56 8 8 chr17 12941488 12941750 -76562803 + L1PA4 LINE L1 5882 6147 -8 2554 47 7 0 chr17 12942570 12942866 -76561687 + AluSp SINE Alu 1 298 -15 384 200 0 38 chr17 12943152 12943232 -76561321 - L2 LINE L2 0 3313 3237 428 0 19 0 chr17 12943323 12943375 -76561178 + (GA)n Simple_repeat Simple_repeat 2 54 0 5539 281 163 12 chr17 12943427 12943516 -76561037 - L2 LINE L2 -116 3197 3123 1814 174 138 31 chr17 12943516 12943935 -76560618 - MLT1C LTR MaLR 0 467 4 5539 281 163 12 chr17 12943935 12946586 -76557967 - L2 LINE L2 -190 3123 28 2446 251 100 31 chr17 12948100 12948283 -76556270 + L2 LINE L2 2163 2332 -981 1768 264 58 36 chr17 12948283 12948813 -76555740 + MLT1F LTR MaLR 1 542 0 2446 251 100 31 chr17 12948813 12949672 -76554881 + L2 LINE L2 2332 3291 -22 2601 52 3 0 chr17 12949672 12949980 -76554573 - AluY SINE Alu -2 309 1 2446 251 100 31 chr17 12949980 12949996 -76554557 + L2 LINE L2 3291 3304 -9 583 259 99 53 chr17 12950057 12950432 -76554121 + L1MEc LINE L1 805 1196 -4923 7625 53 18 0 chr17 12950436 12951427 -76553126 - L1PA8 LINE L1 0 6172 5174 401 273 73 22 chr17 12951485 12951792 -76552761 + L1MEc LINE L1 1306 1627 -863 2313 84 0 7 chr17 12951982 12952281 -76552272 + AluSg SINE Alu 1 297 -13 482 279 52 96 chr17 12952401 12952556 -76551997 + L1MEc LINE L1 1985 2145 -3984 2607 143 35 21 chr17 12952556 12952754 -76551799 + Tigger2a DNA MER2_type 1 195 -2513 2115 116 10 0 chr17 12952754 12953048 -76551505 - AluY SINE Alu -14 297 1 2607 143 35 21 chr17 12953048 12953277 -76551276 + Tigger2a DNA MER2_type 195 434 0 482 279 52 96 chr17 12953277 12953650 -76550903 + L1MEc LINE L1 2145 2447 -3682 2248 121 0 0 chr17 12953650 12953955 -76550598 + AluSx SINE Alu 1 305 -7 482 279 52 96 chr17 12953955 12954074 -76550479 + L1MEc LINE L1 2447 2570 -3559 2124 128 0 3 chr17 12954553 12954842 -76549711 - AluSx SINE Alu -24 288 1 667 356 62 12 chr17 12955047 12955451 -76549102 - L2 LINE L2 -2803 511 88 2344 100 0 0 chr17 12957211 12957512 -76547041 + AluY SINE Alu 1 301 -10 2613 125 9 60 chr17 12957631 12958079 -76546474 - L1PA15 LINE L1 -1 6164 5740 2505 46 0 23 chr17 12959414 12959720 -76544833 + AluY SINE Alu 1 299 -12 306 0 0 0 chr17 12959720 12959754 -76544799 + (TA)n Simple_repeat Simple_repeat 2 35 0 315 205 145 24 chr17 12959884 12959967 -76544586 - MIR3 SINE MIR -49 159 67 494 225 0 29 chr17 12960691 12960829 -76543724 - L1ME4a LINE L1 -9 6112 5979 229 280 0 13 chr17 12961484 12961559 -76542994 - HAL1b LINE L1 -49 1299 1226 2292 90 0 20 chr17 12961559 12961859 -76542694 - AluSq SINE Alu -19 294 1 342 335 62 22 chr17 12961859 12962083 -76542470 - L1ME4a LINE L1 -146 5975 5743 2379 95 3 0 chr17 12962495 12962801 -76541752 - AluSx SINE Alu -5 307 1 360 0 0 0 chr17 12963415 12963455 -76541098 + (CA)n Simple_repeat Simple_repeat 1 40 0 243 122 0 0 chr17 12963455 12963504 -76541049 + (A)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr17 12963835 12963859 -76540694 + AT_rich Low_complexity Low_complexity 1 24 0 417 286 64 36 chr17 12963919 12964450 -76540103 - L1M4 LINE L1 -3005 3141 2596 362 243 56 36 chr17 12964908 12965125 -76539428 + MLT1I LTR MaLR 79 269 -140 847 330 119 38 chr17 12965319 12966285 -76538268 - L1 LINE L1 -1675 4471 3425 1849 174 29 66 chr17 12966810 12967292 -76537261 - MLT1C LTR MaLR 0 467 4 2275 91 0 14 chr17 12967407 12967704 -76536849 - AluSc SINE Alu -16 293 1 303 293 98 39 chr17 12968367 12968605 -76535948 - MIR3 SINE MIR -7 255 2 458 199 122 15 chr17 12968786 12968917 -76535636 + MER58C DNA MER1_type 69 213 -2 1397 203 39 36 chr17 12968970 12969334 -76535219 + MLT1A1 LTR MaLR 1 365 0 326 258 93 10 chr17 12969639 12969736 -76534817 + L2 LINE L2 3190 3294 -19 235 326 51 0 chr17 12969958 12970056 -76534497 + L2 LINE L2 3161 3263 -9 336 250 0 0 chr17 12970196 12970276 -76534277 + MER58 DNA MER1_type 205 284 -2136 2146 118 3 7 chr17 12970851 12971157 -76533396 - AluSg SINE Alu -5 305 1 2771 10 0 0 chr17 12971452 12971759 -76532794 + AluYa5 SINE Alu 1 307 -4 376 309 82 60 chr17 12973064 12973297 -76531256 - L1MC4a LINE L1 -1888 5920 5683 231 36 0 0 chr17 12973539 12973567 -76530986 + (TCCA)n Simple_repeat Simple_repeat 1 28 0 190 280 13 53 chr17 12973574 12973649 -76530904 - L2 LINE L2 0 3272 3201 365 299 42 60 chr17 12973716 12973883 -76530670 + MIR3 SINE MIR 8 171 -37 544 243 71 136 chr17 12973888 12974342 -76530211 + Charlie8 DNA MER1_type 16 443 -1974 2195 110 10 3 chr17 12975495 12975803 -76528750 - AluSx SINE Alu -2 310 1 189 301 38 60 chr17 12975854 12975987 -76528566 + L2 LINE L2 2963 3092 -180 644 304 42 17 chr17 12976580 12976817 -76527736 + MIR SINE MIR 20 262 0 284 231 22 66 chr17 12978632 12978723 -76525830 - MIR SINE MIR -70 192 106 2978 61 80 0 chr17 12978887 12979256 -76525297 + MLT2A1 LTR ERVL 1 408 -36 216 0 0 0 chr17 12979256 12979280 -76525273 + (TA)n Simple_repeat Simple_repeat 2 25 0 2978 61 80 0 chr17 12979280 12979321 -76525232 + MLT2A1 LTR ERVL 408 444 0 1022 68 0 0 chr17 12979421 12979553 -76525000 + AluY SINE Alu 169 300 -11 628 129 14 86 chr17 12980134 12980184 -76524369 - L1MB3 LINE L1 0 6183 6131 2251 62 13 13 chr17 12980184 12980489 -76524064 - AluY SINE Alu -6 305 1 628 129 14 86 chr17 12980489 12980578 -76523975 - L1MB3 LINE L1 -52 6131 6054 1626 179 15 57 chr17 12980632 12981039 -76523514 - MLT1B LTR MaLR 0 390 1 400 267 30 0 chr17 12981818 12981953 -76522600 - L1MC4a LINE L1 -1902 5906 5768 334 233 125 42 chr17 12981968 12982088 -76522465 + L2 LINE L2 3171 3300 -13 361 231 49 140 chr17 12982134 12982377 -76522176 - L1MC4a LINE L1 -2179 5629 5409 269 286 78 55 chr17 12982585 12983112 -76521441 - L1MC4a LINE L1 -982 5164 4626 376 345 43 17 chr17 12983221 12983456 -76521097 + L1M4 LINE L1 4853 5093 -1053 7146 32 6 1 chr17 12983478 12984375 -76520178 - L1PA3 LINE L1 -1 6154 5254 716 315 102 68 chr17 12984492 12985384 -76519169 - L1MC4a LINE L1 -1771 4375 3447 1120 101 11 6 chr17 12985439 12985617 -76518936 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 305 262 19 37 chr17 12985624 12985731 -76518822 - L1M4 LINE L1 -1726 4420 4316 202 246 31 15 chr17 12985738 12985803 -76518750 + CT-rich Low_complexity Low_complexity 1 66 0 304 151 0 27 chr17 12985814 12985887 -76518666 + CT-rich Low_complexity Low_complexity 2 72 0 912 218 11 0 chr17 12985887 12986061 -76518492 - AluJb SINE Alu 0 312 137 270 0 0 0 chr17 12986481 12986511 -76518042 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1931 149 31 0 chr17 12986514 12986802 -76517751 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 12986943 12986966 -76517587 + AT_rich Low_complexity Low_complexity 1 23 0 15885 198 19 28 chr17 12987124 12992962 -76511591 - L1PA16 LINE L1 -6 6811 1026 31 26 0 0 chr17 12993462 12993500 -76511053 + AT_rich Low_complexity Low_complexity 1 38 0 258 276 148 49 chr17 12994226 12994592 -76509961 - MLT1J LTR MaLR 0 511 110 402 301 77 64 chr17 12996044 12996432 -76508121 - MLT1K LTR MaLR -9 579 187 719 199 31 82 chr17 12996564 12996760 -76507793 + MER5A DNA MER1_type 1 186 -3 1902 162 0 26 chr17 12997509 12997805 -76506748 + AluJo SINE Alu 1 271 -41 180 0 0 0 chr17 12997805 12997825 -76506728 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 1902 162 0 26 chr17 12997825 12997866 -76506687 + AluJo SINE Alu 271 312 0 602 284 101 0 chr17 12998376 12998594 -76505959 + MIR SINE MIR 9 248 -14 199 351 45 27 chr17 12998676 12998787 -76505766 + L2 LINE L2 3142 3254 -18 771 138 119 0 chr17 12999038 12999197 -76505356 + L1MA6 LINE L1 6067 6244 -56 814 181 36 0 chr17 12999217 12999355 -76505198 + FRAM SINE Alu 1 142 -34 322 130 0 0 chr17 12999375 12999429 -76505124 + L1MA6 LINE L1 6247 6300 0 2410 75 0 7 chr17 12999629 12999936 -76504617 - AluSc SINE Alu -4 305 1 1114 253 93 30 chr17 13000325 13000646 -76503907 - MLT1C LTR MaLR 0 467 109 1737 151 0 15 chr17 13000646 13000917 -76503636 + AluJo SINE Alu 35 301 -11 1114 253 93 30 chr17 13000917 13001034 -76503519 - MLT1C LTR MaLR -358 109 1 1952 106 16 0 chr17 13001350 13001634 -76502919 + AluY SINE Alu 26 313 0 504 228 164 32 chr17 13001742 13001931 -76502622 - MLT1K LTR MaLR -2 586 373 528 157 25 41 chr17 13001943 13002064 -76502489 - L1ME3 LINE L1 -168 6789 6671 4410 260 91 54 chr17 13002130 13002440 -76502113 - L1ME3 LINE L1 -301 6664 6367 1625 172 14 21 chr17 13002440 13002760 -76501793 - AluJb SINE Alu 0 318 1 4410 260 91 54 chr17 13002760 13003909 -76500644 - L1ME3 LINE L1 -598 6367 5262 2171 135 67 0 chr17 13003909 13004250 -76500303 - THE1B LTR MaLR 0 364 1 4410 260 91 54 chr17 13004250 13006023 -76498530 - L1ME3 LINE L1 -1703 5262 3308 391 303 112 26 chr17 13006287 13006821 -76497732 - L1ME3 LINE L1 -4532 2409 1926 386 336 13 7 chr17 13006920 13007069 -76497484 - L1ME3 LINE L1 -5126 1805 1656 276 313 22 11 chr17 13007075 13007257 -76497296 - L1ME3 LINE L1 -4961 1462 1279 313 117 48 179 chr17 13008457 13008602 -76495951 + MER103 DNA DNA 23 148 -18 13406 178 55 10 chr17 13009013 13015583 -76488970 - L1PB1 LINE L1 0 6867 6 197 178 22 0 chr17 13015976 13016021 -76488532 + (TG)n Simple_repeat Simple_repeat 2 47 0 184 269 129 57 chr17 13017310 13017428 -76487125 + L2 LINE L2 2844 2983 -289 2479 89 0 0 chr17 13017428 13017730 -76486823 - AluSg SINE Alu -8 302 1 184 269 129 57 chr17 13017730 13017804 -76486749 + L2 LINE L2 2983 3050 -222 351 0 0 0 chr17 13017905 13017944 -76486609 + (TG)n Simple_repeat Simple_repeat 2 40 0 204 228 44 125 chr17 13018351 13018487 -76486066 - MIR SINE MIR -71 191 67 1776 174 0 17 chr17 13018571 13018865 -76485688 - AluJb SINE Alu -23 289 1 927 186 23 17 chr17 13018865 13019042 -76485511 - MLT1B LTR MaLR -212 178 1 23 33 0 0 chr17 13020040 13020070 -76484483 + AT_rich Low_complexity Low_complexity 1 30 0 765 247 74 23 chr17 13020822 13021159 -76483394 + LTR33A LTR ERVL 137 521 -2 198 0 0 0 chr17 13022193 13022215 -76482338 + (TC)n Simple_repeat Simple_repeat 2 23 0 2328 92 10 0 chr17 13022215 13022509 -76482044 - AluSx SINE Alu -15 297 1 1957 249 30 23 chr17 13022557 13023331 -76481222 - L1MEc LINE L1 -3324 2891 1877 360 346 39 0 chr17 13024179 13024335 -76480218 + MLT1K LTR MaLR 124 285 -303 556 240 36 77 chr17 13024387 13024583 -76479970 + MLT1K LTR MaLR 399 586 -2 363 285 119 52 chr17 13024719 13024926 -76479627 + L1ME LINE L1 5322 5514 -607 688 233 0 23 chr17 13024926 13025059 -76479494 - FLAM_A SINE Alu -3 130 1 363 285 119 52 chr17 13025059 13025255 -76479298 + L1ME LINE L1 5514 5752 -369 22 35 0 0 chr17 13025361 13025390 -76479163 + AT_rich Low_complexity Low_complexity 1 29 0 2176 78 3 7 chr17 13025524 13025850 -76478703 + AluY SINE Alu 1 325 0 2402 89 3 0 chr17 13025852 13026156 -76478397 + AluY SINE Alu 1 305 -6 201 313 31 0 chr17 13026223 13026287 -76478266 - L2 LINE L2 -212 3060 2995 984 250 87 52 chr17 13027345 13027749 -76476804 - MLT1J1 LTR MaLR -8 438 21 201 300 50 0 chr17 13027774 13027834 -76476719 + MER91C DNA MER1_type 47 109 -31 252 245 213 38 chr17 13028410 13028573 -76475980 - MIR SINE MIR -67 141 13 258 283 0 19 chr17 13028863 13028952 -76475601 - MER69 DNA AcHobo -1753 773 685 2407 71 7 13 chr17 13028952 13029260 -76475293 + AluY SINE Alu 1 306 -5 258 283 0 19 chr17 13029260 13029276 -76475277 - MER69 DNA AcHobo -1841 685 670 243 188 0 0 chr17 13029281 13029345 -76475208 + L1MC4 LINE L1 6640 6703 -1339 245 227 0 27 chr17 13029345 13029420 -76475133 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 246 227 23 23 chr17 13029422 13029510 -76475043 - L1MC4 LINE L1 -1340 6702 6615 * 256 216 23 23 chr17 13029432 13029520 -76475033 + L1MC4 LINE L1 6615 6702 -1340 528 246 0 0 chr17 13029530 13029668 -76474885 + (TA)n Simple_repeat Simple_repeat 1 138 0 1881 280 115 0 chr17 13029672 13030279 -76474274 - MER69 DNA AcHobo -1845 681 5 319 264 230 13 chr17 13030536 13030775 -76473778 + LTR33A LTR ERVL 226 516 -7 2393 89 0 0 chr17 13030982 13031275 -76473278 + AluSc SINE Alu 1 293 -16 436 305 114 15 chr17 13031971 13032233 -76472320 + L1ME4a LINE L1 4142 4429 -1717 438 285 84 9 chr17 13032875 13033089 -76471464 + L1ME4a LINE L1 5653 5882 -239 2256 133 133 13 chr17 13033318 13033700 -76470853 - MSTA LTR MaLR 0 428 1 441 254 189 0 chr17 13033936 13034058 -76470495 - MER5A DNA MER1_type -6 183 39 922 236 151 48 chr17 13034769 13035167 -76469386 - MLT1J2 LTR MaLR 0 450 12 1326 138 0 5 chr17 13035495 13035690 -76468863 - L1PB4 LINE L1 -9 6147 5954 466 0 0 0 chr17 13035929 13035981 -76468572 - MADE1 DNA Mariner -27 53 2 280 196 71 0 chr17 13036133 13036189 -76468364 - L2 LINE L2 -2 3311 3252 207 0 0 0 chr17 13036735 13036758 -76467795 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 447 106 0 0 chr17 13038361 13038427 -76466126 + (TG)n Simple_repeat Simple_repeat 2 67 0 276 53 0 0 chr17 13039616 13039654 -76464899 + (CA)n Simple_repeat Simple_repeat 2 39 0 2163 124 3 0 chr17 13040131 13040437 -76464116 - AluSx SINE Alu -5 307 1 5237 134 9 31 chr17 13040941 13041529 -76463024 + MER54B LTR ERVL 1 568 -225 2141 122 10 7 chr17 13041529 13041832 -76462721 - AluSq SINE Alu -9 304 1 5237 134 9 31 chr17 13041832 13042051 -76462502 + MER54B LTR ERVL 568 790 -3 1936 148 184 11 chr17 13042239 13042424 -76462129 - MSTA LTR MaLR 0 428 276 525 16 0 0 chr17 13042424 13042486 -76462067 + (GA)n Simple_repeat Simple_repeat 1 62 0 1936 148 184 11 chr17 13042486 13042664 -76461889 - MSTA LTR MaLR -152 276 2 449 236 3 5 chr17 13042761 13042869 -76461684 - MLT1H LTR MaLR 0 549 292 256 286 0 24 chr17 13043058 13043142 -76461411 - MLT1H LTR MaLR -375 174 93 * 583 183 29 10 chr17 13043130 13043234 -76461319 - MER81 DNA DNA -8 106 1 234 346 56 9 chr17 13043234 13043341 -76461212 - MLT1H LTR MaLR -437 112 1 300 53 0 0 chr17 13044921 13044959 -76459594 + (CA)n Simple_repeat Simple_repeat 2 39 0 1825 161 0 16 chr17 13045031 13045390 -76459163 - AluJo SINE Alu 0 354 1 1306 169 57 33 chr17 13045727 13046028 -76458525 + L1MA9 LINE L1 5998 6305 -7 619 133 40 77 chr17 13046013 13046176 -76458377 - L1MB8 LINE L1 -1 6183 6030 * 21 71 0 0 chr17 13046276 13046318 -76458235 + AT_rich Low_complexity Low_complexity 1 42 0 1833 128 6 56 chr17 13046608 13046927 -76457626 - AluSx SINE Alu -9 303 1 282 343 130 4 chr17 13047796 13048050 -76456503 + L2 LINE L2 3017 3302 -11 229 140 105 35 chr17 13048062 13048077 -76456476 - MER46A DNA MER2_type -79 157 139 1444 156 90 11 chr17 13048077 13048406 -76456147 + Tigger4(Zombi) DNA MER2_type 1 2731 0 219 139 0 0 chr17 13048414 13048450 -76456103 + (TG)n Simple_repeat Simple_repeat 2 37 0 200 316 150 28 chr17 13048507 13048760 -76455793 - L2 LINE L2 -640 2674 2391 400 238 0 0 chr17 13048760 13048840 -76455713 - Tigger7 DNA MER2_type -1 2586 2507 2264 92 0 0 chr17 13048880 13049212 -76455341 - AluSx SINE Alu 0 332 1 986 185 0 0 chr17 13049213 13049370 -76455183 - Tigger7 DNA MER2_type -342 391 235 8621 128 16 10 chr17 13050069 13051363 -76453190 - HSMAR2 DNA Mariner 0 1302 2 346 314 93 6 chr17 13051476 13051648 -76452905 - L1MEc LINE L1 -2279 3936 3750 23 33 0 0 chr17 13051650 13051680 -76452873 + AT_rich Low_complexity Low_complexity 1 30 0 430 303 92 40 chr17 13051996 13053112 -76451441 - L1MEc LINE L1 -2948 3267 2133 641 296 73 74 chr17 13053722 13054424 -76450129 + L1MEd LINE L1 328 1028 -5091 243 125 0 0 chr17 13054498 13054538 -76450015 + (GA)n Simple_repeat Simple_repeat 1 40 0 219 57 0 75 chr17 13054546 13054599 -76449954 + (AGGGGG)n Simple_repeat Simple_repeat 1 49 0 263 181 160 43 chr17 13054917 13055011 -76449542 - MLT1J1 LTR MaLR -284 162 58 2746 138 41 10 chr17 13055218 13055428 -76449125 - MER61B LTR ERV1 0 425 223 303 28 0 0 chr17 13055428 13055464 -76449089 + (CAGGC)n Simple_repeat Simple_repeat 1 36 0 2746 138 41 10 chr17 13055464 13055665 -76448888 - MER61B LTR ERV1 -202 223 1 933 216 9 105 chr17 13055665 13055710 -76448843 - L1ME3A LINE L1 -25 6145 6097 3387 130 16 6 chr17 13055710 13056216 -76448337 + MER75 DNA T2_type 1 511 -3 933 216 9 105 chr17 13056216 13056408 -76448145 - L1ME3A LINE L1 -73 6097 5945 2578 59 0 0 chr17 13056408 13056711 -76447842 - AluY SINE Alu -8 303 1 933 216 9 105 chr17 13056711 13056796 -76447757 - L1ME3A LINE L1 -225 5945 5853 783 176 0 0 chr17 13056844 13056975 -76447578 - MLT2B1 LTR ERVL -389 131 1 190 222 0 0 chr17 13057116 13057152 -76447401 - L2 LINE L2 -4 3309 3274 336 319 14 28 chr17 13057230 13057371 -76447182 + L2 LINE L2 2932 3070 -202 237 214 0 0 chr17 13057466 13057508 -76447045 + L2 LINE L2 3219 3260 -12 1325 282 97 27 chr17 13057508 13058293 -76446260 - L1 LINE L1 -1814 4332 3487 4258 149 42 76 chr17 13058294 13058887 -76445666 + MER4D LTR ERV1 1 308 -356 2610 30 7 3 chr17 13058887 13059190 -76445363 - AluY SINE Alu -7 304 1 4258 149 42 76 chr17 13059190 13059536 -76445017 + MER4D LTR ERV1 308 664 0 276 249 63 53 chr17 13059673 13059862 -76444691 - L1 LINE L1 -2961 3185 2995 4373 134 11 19 chr17 13060154 13060290 -76444263 - MER41B LTR ERV1 0 635 499 2429 69 6 31 chr17 13060290 13060609 -76443944 + AluY SINE Alu 1 311 0 4373 134 11 19 chr17 13060609 13061112 -76443441 - MER41B LTR ERV1 -136 499 1 300 294 77 42 chr17 13061181 13061324 -76443229 - L2 LINE L2 -1 3271 3124 208 185 0 154 chr17 13061452 13061517 -76443036 + MIR SINE MIR 86 140 -122 619 208 163 30 chr17 13061578 13061777 -76442776 - MER2 DNA MER2_type 0 345 120 1624 169 38 91 chr17 13061777 13061846 -76442707 - THE1C LTR MaLR 0 375 304 2282 76 0 9 chr17 13061846 13062180 -76442373 + AluY SINE Alu 2 282 -29 1624 169 38 91 chr17 13062180 13062298 -76442255 - THE1C LTR MaLR -71 304 181 3708 98 226 2 chr17 13062298 13062860 -76441693 + LTR12 LTR ERV1 1 688 0 1624 169 38 91 chr17 13062860 13063066 -76441487 - THE1C LTR MaLR -194 181 1 678 144 10 0 chr17 13063073 13063177 -76441376 - MER2 DNA MER2_type -240 105 1 21 71 0 0 chr17 13063428 13063470 -76441083 + AT_rich Low_complexity Low_complexity 1 42 0 198 71 0 0 chr17 13063843 13063871 -76440682 + (TG)n Simple_repeat Simple_repeat 1 28 0 360 248 79 0 chr17 13064849 13064950 -76439603 - MIR SINE MIR -117 145 37 435 294 23 34 chr17 13065006 13065183 -76439370 - L2 LINE L2 -7 3306 3132 615 325 108 7 chr17 13065282 13065577 -76438976 - LTR16C LTR ERVL 0 491 167 3596 251 207 25 chr17 13065810 13067357 -76437196 - L2 LINE L2 -257 3056 1207 776 278 98 68 chr17 13067708 13068011 -76436542 + LTR16A LTR ERVL 79 396 -61 2323 104 0 13 chr17 13068011 13068319 -76436234 - AluSx SINE Alu -8 304 1 776 278 98 68 chr17 13068319 13068382 -76436171 + LTR16A LTR ERVL 396 456 -1 613 277 141 31 chr17 13068382 13068837 -76435716 + L1ME4a LINE L1 5614 6118 -3 340 252 32 16 chr17 13069301 13069424 -76435129 + MER113 DNA MER1_type? 4 128 -393 1010 128 45 0 chr17 13070159 13070315 -76434238 - AluSq SINE Alu -17 296 134 1919 151 10 16 chr17 13070318 13070630 -76433923 - AluSq SINE Alu -3 310 1 2669 61 15 6 chr17 13071381 13071710 -76432843 + L1PA8 LINE L1 5841 6172 0 198 0 0 0 chr17 13071710 13071732 -76432821 + (GA)n Simple_repeat Simple_repeat 1 22 0 604 281 6 18 chr17 13072494 13072661 -76431892 - FRAM SINE Alu 0 166 2 2414 62 3 0 chr17 13124342 13124630 -76379923 + AluY SINE Alu 13 301 -10 21 36 0 0 chr17 13124850 13124878 -76379675 + AT_rich Low_complexity Low_complexity 1 28 0 2135 82 37 10 chr17 13125717 13126011 -76378542 + AluSg1 SINE Alu 1 302 -7 2078 112 3 3 chr17 13126021 13126306 -76378247 + AluSp SINE Alu 1 285 -28 2149 110 4 0 chr17 13127522 13127850 -76376703 - AluSc SINE Alu 0 329 1 403 264 84 50 chr17 13127919 13128320 -76376233 + MLT1G1 LTR MaLR 39 482 -113 1633 214 97 7 chr17 13128327 13128748 -76375805 - MLT1C LTR MaLR -8 459 1 302 277 50 25 chr17 13128748 13128864 -76375689 + MLT1G1 LTR MaLR 477 595 0 247 263 20 20 chr17 13130333 13130432 -76374121 - LTR16A1 LTR ERVL 0 457 359 220 293 85 0 chr17 13130518 13130600 -76373953 + MIR SINE MIR 20 108 -100 802 269 81 27 chr17 13131186 13131484 -76373069 - L2 LINE L2 -1 3312 2999 423 0 0 0 chr17 13131500 13131547 -76373006 + (TG)n Simple_repeat Simple_repeat 1 47 0 837 205 54 0 chr17 13131653 13131819 -76372734 + MER5B DNA MER1_type 1 175 -3 1824 221 7 38 chr17 13131853 13132214 -76372339 + MLT2D LTR ERVL 3 351 -63 2209 116 3 0 chr17 13132214 13132515 -76372038 + AluSg SINE Alu 1 302 -8 1824 221 7 38 chr17 13132515 13132578 -76371975 + MLT2D LTR ERVL 351 414 0 494 276 71 34 chr17 13132578 13132653 -76371900 - L2 LINE L2 -569 2745 2674 1694 174 111 38 chr17 13132653 13133077 -76371476 + MSTB2 LTR MaLR 1 455 -2 494 276 71 34 chr17 13133077 13133240 -76371313 - L2 LINE L2 -640 2674 2498 1694 188 79 9 chr17 13134109 13134450 -76370103 + MLT1A1 LTR MaLR 1 365 0 256 265 44 0 chr17 13134608 13134676 -76369877 - L2 LINE L2 -7 3265 3195 328 169 12 12 chr17 13135067 13135150 -76369403 + (TA)n Simple_repeat Simple_repeat 1 83 0 1688 174 51 21 chr17 13135193 13135527 -76369026 + MER2 DNA MER2_type 1 344 0 35 54 0 0 chr17 13135616 13135672 -76368881 + AT_rich Low_complexity Low_complexity 1 56 0 2257 70 6 57 chr17 13136144 13136460 -76368093 + AluY SINE Alu 1 300 -11 492 332 79 30 chr17 13136497 13137102 -76367451 + L1M4 LINE L1 2765 3399 -2747 24 0 0 0 chr17 13137446 13137470 -76367083 + AT_rich Low_complexity Low_complexity 1 24 0 233 308 43 26 chr17 13138454 13138571 -76365982 - L2 LINE L2 -1 3271 3153 430 113 127 0 chr17 13139013 13139084 -76365469 + MADE1 DNA Mariner 1 80 0 2377 70 3 10 chr17 13139770 13140069 -76364484 - AluY SINE Alu -14 297 1 1557 106 0 5 chr17 13140098 13140305 -76364248 + AluSg/x SINE Alu 92 297 -15 475 286 16 81 chr17 13140305 13140405 -76364148 + MER5A DNA MER1_type 17 122 -67 1989 146 3 0 chr17 13140405 13140699 -76363854 + AluSx SINE Alu 1 295 -17 2269 72 23 20 chr17 13140699 13141003 -76363550 + AluY SINE Alu 1 305 -6 475 286 16 81 chr17 13141003 13141086 -76363467 + MER5A DNA MER1_type 120 189 0 414 283 0 0 chr17 13142435 13142594 -76361959 + (TG)n Simple_repeat Simple_repeat 1 159 0 2166 107 9 28 chr17 13143490 13143807 -76360746 - AluSx SINE Alu -1 311 1 2091 83 38 10 chr17 13144489 13144778 -76359775 + AluSg1 SINE Alu 1 297 -12 2466 84 3 3 chr17 13144788 13145096 -76359457 + AluSp SINE Alu 1 308 -5 2453 191 62 28 chr17 13145098 13145392 -76359161 - L1MA9 LINE L1 -38 6274 5991 2020 140 0 10 chr17 13145392 13145700 -76358853 - AluSx SINE Alu -7 305 1 2453 191 62 28 chr17 13145700 13146003 -76358550 - L1MA9 LINE L1 -321 5991 5657 1798 226 108 10 chr17 13146167 13146650 -76357903 + MER74A LTR ERVL 1 530 -28 21 0 0 0 chr17 13146858 13146879 -76357674 + AT_rich Low_complexity Low_complexity 1 21 0 2266 102 13 3 chr17 13146884 13147187 -76357366 + AluSg SINE Alu 1 306 -4 1274 103 6 0 chr17 13147988 13148153 -76356400 - AluSq SINE Alu -14 299 134 2238 113 0 13 chr17 13148153 13148463 -76356090 - AluSx SINE Alu -6 306 1 2016 88 4 0 chr17 13148463 13148735 -76355818 - L1PB1 LINE L1 -59 6092 5820 984 202 17 17 chr17 13148918 13149156 -76355397 - MER74A LTR ERVL -149 409 172 354 245 11 21 chr17 13149652 13149746 -76354807 + MER5B DNA MER1_type 1 93 -85 1701 186 21 53 chr17 13150844 13151067 -76353486 - MLT1A1 LTR MaLR 0 365 157 2141 138 0 7 chr17 13151067 13151365 -76353188 - AluSx SINE Alu -16 296 1 1701 186 21 53 chr17 13151365 13151518 -76353035 - MLT1A1 LTR MaLR -208 157 1 298 294 114 27 chr17 13151595 13151779 -76352774 - MIR SINE MIR -12 250 51 779 328 91 11 chr17 13151915 13152445 -76352108 - L2 LINE L2 -4 3309 2737 841 202 32 128 chr17 13152455 13152526 -76352027 - L1ME1 LINE L1 -5 6161 6085 2412 165 34 0 chr17 13152526 13152938 -76351615 - MSTB LTR MaLR 0 426 1 841 202 32 128 chr17 13152938 13153178 -76351375 - L1ME1 LINE L1 -81 6085 5880 * 2498 235 71 40 chr17 13153162 13154134 -76350419 - L1M4 LINE L1 -2107 4039 3038 1307 230 122 68 chr17 13154134 13154211 -76350342 - L1MEc LINE L1 -5831 565 494 2362 78 3 0 chr17 13154211 13154506 -76350047 + AluY SINE Alu 1 296 -15 1307 230 122 68 chr17 13154506 13154762 -76349791 - L1MEc LINE L1 -5902 494 196 2453 79 3 0 chr17 13154762 13155067 -76349486 + AluSp SINE Alu 1 306 -7 1307 230 122 68 chr17 13155067 13155214 -76349339 - L1MEc LINE L1 -6200 196 58 906 284 95 31 chr17 13155245 13155886 -76348667 - L2 LINE L2 -568 2746 2065 221 297 99 0 chr17 13155939 13156050 -76348503 + L2 LINE L2 3116 3237 -35 339 25 0 0 chr17 13156058 13156098 -76348455 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 183 152 0 0 chr17 13157846 13157892 -76346661 + (CA)n Simple_repeat Simple_repeat 1 46 0 1710 212 3 54 chr17 13158673 13159064 -76345489 - MLT1A2 LTR MaLR 0 374 4 393 286 143 60 chr17 13159167 13159600 -76344953 + L2 LINE L2 2841 3309 -4 216 256 35 58 chr17 13160252 13160338 -76344215 - L2 LINE L2 -3 3269 3186 1641 163 14 3 chr17 13161309 13161603 -76342950 + L1MC1 LINE L1 6037 6333 0 1498 160 113 35 chr17 13161827 13162145 -76342408 - MER2 DNA MER2_type 0 344 2 2134 111 13 7 chr17 13162770 13163076 -76341477 - AluSg SINE Alu -2 308 1 291 28 0 0 chr17 13163078 13163114 -76341439 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 850 164 8 0 chr17 13163130 13163264 -76341289 - FRAM SINE Alu -41 135 1 238 284 80 23 chr17 13163375 13163463 -76341090 - MIR SINE MIR -147 115 23 471 292 32 43 chr17 13164496 13164681 -76339872 + LTR33 LTR ERVL 1 183 -338 2528 48 0 7 chr17 13164832 13165126 -76339427 - AluY SINE Alu -14 297 6 224 216 54 68 chr17 13166620 13166694 -76337859 - L2 LINE L2 -5 3308 3236 2548 50 0 0 chr17 13168006 13168304 -76336249 + AluY SINE Alu 1 298 -13 1848 113 0 0 chr17 13168405 13168691 -76335862 - AluSx SINE Alu 0 321 36 1927 182 25 4 chr17 13169689 13170148 -76334405 + MLT2B1 LTR ERVL 2 515 0 2179 179 47 7 chr17 13170190 13170593 -76333960 + MSTB1 LTR MaLR 1 419 -13 294 247 118 0 chr17 13170604 13170689 -76333864 - MIR SINE MIR -99 163 69 2112 107 0 0 chr17 13170761 13171041 -76333512 + AluSx SINE Alu 1 280 -32 334 256 22 11 chr17 13171173 13171263 -76333290 - MIR SINE MIR -167 95 5 195 232 0 0 chr17 13171669 13171725 -76332828 + (TA)n Simple_repeat Simple_repeat 1 56 0 309 310 9 18 chr17 13171796 13171909 -76332644 - MIR3 SINE MIR -3 205 94 308 268 52 88 chr17 13172146 13172340 -76332213 + MIR SINE MIR 76 262 0 570 264 92 0 chr17 13173060 13173223 -76331330 - MIR SINE MIR -5 257 80 4116 120 20 16 chr17 13174343 13174984 -76329569 - LTR9B LTR ERV1 0 644 1 213 94 0 0 chr17 13175040 13175072 -76329481 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4951 143 39 1 chr17 13176238 13177118 -76327435 + L1 LINE L1 4125 5037 -1109 493 7 119 34 chr17 13177140 13177590 -76326963 + (TA)n Simple_repeat Simple_repeat 1 488 0 386 140 53 12 chr17 13177590 13177761 -76326792 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 419 204 57 18 chr17 13177776 13178113 -76326440 + (CATAT)n Simple_repeat Simple_repeat 1 350 0 188 127 66 60 chr17 13178126 13178292 -76326261 + (CATAT)n Simple_repeat Simple_repeat 4 170 0 286 125 64 64 chr17 13178306 13178591 -76325962 + (CATAT)n Simple_repeat Simple_repeat 1 285 0 226 106 56 56 chr17 13178594 13178773 -76325780 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 125 14 14 chr17 13178739 13178811 -76325742 + (TAA)n Simple_repeat Simple_repeat 3 74 0 2308 89 52 3 chr17 13178823 13179322 -76325231 - L1P2 LINE L1 -553 5601 5062 2884 53 8 11 chr17 13179322 13179684 -76324869 + L1PA8 LINE L1 5792 6165 -7 303 331 57 62 chr17 13179689 13180220 -76324333 + L1M4 LINE L1 3759 4286 -1860 355 269 11 0 chr17 13180285 13180378 -76324175 - MIR SINE MIR -2 260 167 565 235 136 4 chr17 13180463 13180646 -76323907 + MIR SINE MIR 58 262 0 22 0 0 0 chr17 13180754 13180776 -76323777 + AT_rich Low_complexity Low_complexity 1 22 0 3415 170 59 12 chr17 13180780 13181606 -76322947 - L1MC1 LINE L1 -346 5987 5122 684 202 62 28 chr17 13181615 13181793 -76322760 + MER21B LTR ERV1 626 809 -54 8311 220 46 41 chr17 13181825 13184659 -76319894 - L1M4c LINE L1 -1725 4245 1382 180 0 0 0 chr17 13184660 13184680 -76319873 + (T)n Simple_repeat Simple_repeat 1 20 0 307 100 0 0 chr17 13184680 13184720 -76319833 - AluY SINE Alu -196 105 66 43135 30 21 1 chr17 13184735 13190764 -76313789 - L1PA2 LINE L1 -1 6154 3 3457 279 68 17 chr17 13190770 13191186 -76313367 - L1M4c LINE L1 -4641 1250 856 249 33 0 0 chr17 13191186 13191216 -76313337 + (TC)n Simple_repeat Simple_repeat 1 30 0 3457 279 68 17 chr17 13191216 13192642 -76311911 - L1M4c LINE L1 -5035 856 7 647 282 17 4 chr17 13192639 13192880 -76311673 - L1M4 LINE L1 -1762 4384 4141 * 311 311 40 128 chr17 13193288 13193818 -76310735 - L3 LINE CR1 -2 1575 1093 340 250 135 10 chr17 13194384 13194488 -76310065 - MIR3 SINE MIR -4 204 88 231 36 0 0 chr17 13194885 13194913 -76309640 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 442 221 64 50 chr17 13195163 13195303 -76309250 + L1MC4a LINE L1 5622 5763 -2045 258 264 14 14 chr17 13195402 13195474 -76309079 + CT-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr17 13195525 13195549 -76309004 + AT_rich Low_complexity Low_complexity 1 24 0 1220 255 153 98 chr17 13195716 13196120 -76308433 - L1MC4 LINE L1 -127 7681 7301 1890 194 0 44 chr17 13196120 13196527 -76308026 + MLT1B LTR MaLR 1 389 -1 1220 255 153 98 chr17 13196527 13197475 -76307078 - L1MC4 LINE L1 -507 7301 6275 330 274 61 71 chr17 13197551 13197763 -76306790 + L1MC4a LINE L1 5851 6060 -1748 257 153 0 17 chr17 13198316 13198375 -76306178 + CT-rich Low_complexity Low_complexity 1 58 0 990 203 54 56 chr17 13198632 13198994 -76305559 + MSTB2 LTR MaLR 3 447 -10 180 77 0 0 chr17 13199009 13199035 -76305518 + (TG)n Simple_repeat Simple_repeat 1 26 0 6118 139 21 26 chr17 13199403 13199836 -76304717 - L1MC1 LINE L1 0 6333 5900 2234 100 0 20 chr17 13199836 13200137 -76304416 - AluSx SINE Alu -17 295 1 6118 139 21 26 chr17 13200137 13200255 -76304298 - L1MC1 LINE L1 -433 5900 5783 2188 221 25 10 chr17 13200255 13200734 -76303819 + MER66B LTR ERV1 1 486 0 6118 139 21 26 chr17 13200734 13201396 -76303157 - L1MC1 LINE L1 -550 5783 5122 867 254 102 25 chr17 13201561 13201836 -76302717 + MLT1I LTR MaLR 114 409 0 312 335 206 0 chr17 13202372 13202542 -76302011 - MIR SINE MIR -11 251 47 24 0 0 0 chr17 13203120 13203144 -76301409 + AT_rich Low_complexity Low_complexity 1 24 0 415 239 57 45 chr17 13203540 13203716 -76300837 - L1ME4a LINE L1 0 6121 5944 354 299 112 22 chr17 13203779 13204003 -76300550 + MIR SINE MIR 17 260 -2 2416 74 0 0 chr17 13204075 13204371 -76300182 - AluSg1 SINE Alu -13 296 1 452 283 136 29 chr17 13204378 13204650 -76299903 - L1ME4a LINE L1 -297 5824 5524 1177 204 37 69 chr17 13204895 13205272 -76299281 - MLT1A1 LTR MaLR 0 365 1 938 186 39 20 chr17 13205569 13205773 -76298780 + MER3 DNA MER1_type 1 208 -1 264 216 0 0 chr17 13205731 13205782 -76298771 - MER3 DNA MER1_type -119 90 40 * 217 309 0 0 chr17 13205827 13205882 -76298671 + MIR SINE MIR 90 144 -64 188 385 0 0 chr17 13205871 13205936 -76298617 - MIR SINE MIR -92 116 52 * 1667 172 24 10 chr17 13206034 13206325 -76298228 - AluJo SINE Alu -17 295 1 517 299 120 25 chr17 13206377 13206618 -76297935 + L2 LINE L2 3050 3313 0 299 311 68 0 chr17 13206980 13207083 -76297470 + MIR SINE MIR 132 241 -21 183 80 0 0 chr17 13207347 13207372 -76297181 + (CCCTAA)n Simple_repeat Simple_repeat 1 25 0 26 64 0 0 chr17 13208491 13208538 -76296015 + AT_rich Low_complexity Low_complexity 1 47 0 3415 191 8 33 chr17 13208874 13208978 -76295575 - L1 LINE L1 -2299 3847 3742 2463 63 0 3 chr17 13208978 13209277 -76295276 - AluY SINE Alu -13 298 1 3415 191 8 33 chr17 13209277 13210019 -76294534 - L1 LINE L1 -2404 3742 3022 244 88 0 0 chr17 13210042 13210076 -76294477 - L1 LINE L1 -1374 4772 4739 2482 159 66 15 chr17 13210090 13210562 -76293991 + L1PA16 LINE L1 5669 6164 -2 22 35 0 0 chr17 13210562 13210591 -76293962 + AT_rich Low_complexity Low_complexity 1 29 0 1610 213 49 62 chr17 13210596 13211108 -76293445 + MLT1D LTR MaLR 1 505 0 269 143 14 57 chr17 13211278 13211348 -76293205 - L1ME LINE L1 -233 5888 5822 366 304 118 29 chr17 13211416 13211798 -76292755 - L1ME LINE L1 -439 5682 5267 219 69 0 0 chr17 13212048 13212077 -76292476 + (CA)n Simple_repeat Simple_repeat 1 29 0 180 77 0 0 chr17 13212078 13212104 -76292449 + (TATATG)n Simple_repeat Simple_repeat 5 30 0 328 205 12 118 chr17 13212383 13212544 -76292009 - MIR SINE MIR -30 232 89 1790 144 35 78 chr17 13212705 13212742 -76291811 - L1MA9 LINE L1 -346 5945 5908 1985 130 40 0 chr17 13212742 13213041 -76291512 + AluSx SINE Alu 1 311 -1 1790 144 35 78 chr17 13213041 13213377 -76291176 - L1MA9 LINE L1 -383 5908 5588 1315 180 57 70 chr17 13213375 13213486 -76291067 + L1MA9 LINE L1 5946 6057 -255 * 2316 101 0 3 chr17 13213486 13213792 -76290761 + AluSx SINE Alu 1 305 -7 1315 180 57 70 chr17 13213792 13214052 -76290501 + L1MA9 LINE L1 6057 6312 0 213 94 0 0 chr17 13214238 13214270 -76290283 + (CA)n Simple_repeat Simple_repeat 1 32 0 305 224 12 118 chr17 13214544 13214705 -76289848 - MIR SINE MIR -30 232 89 644 238 136 88 chr17 13215560 13215833 -76288720 + MER69 DNA AcHobo 283 568 -658 * 1044 175 99 21 chr17 13215831 13216214 -76288339 + MER69 DNA AcHobo 2010 2522 -4 2028 140 0 10 chr17 13216798 13217106 -76287447 - AluSx SINE Alu -7 305 1 325 38 0 38 chr17 13217474 13217527 -76287026 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 610 211 6 75 chr17 13217875 13218036 -76286517 - L2 LINE L2 0 3313 3164 1773 234 57 7 chr17 13218047 13218570 -76285983 + HsTC2 DNA Tc2 2 591 -1307 861 125 21 0 chr17 13218570 13218714 -76285839 + L1MA9 LINE L1 6162 6308 -4 1150 153 129 0 chr17 13219323 13219532 -76285021 + MER46A DNA MER2_type 1 236 0 448 255 40 20 chr17 13220857 13221006 -76283547 - L2 LINE L2 0 3313 3162 195 296 0 0 chr17 13221051 13221105 -76283448 + MIR SINE MIR 139 192 -70 258 375 46 13 chr17 13221335 13221487 -76283066 + MLT1K LTR MaLR 166 322 -266 2132 155 32 34 chr17 13221517 13222076 -76282477 - MLT2A2 LTR ERVL 0 554 1 519 273 160 0 chr17 13222175 13222325 -76282228 - MIR SINE MIR -73 189 16 2004 133 10 0 chr17 13223048 13223342 -76281211 - AluSg SINE Alu -13 297 1 223 400 69 12 chr17 13224620 13224780 -76279773 - L2 LINE L2 -4 3268 3100 206 254 51 0 chr17 13225620 13225679 -76278874 + MER5A DNA MER1_type 128 189 0 735 235 9 50 chr17 13225820 13226020 -76278533 + L1MD2 LINE L1 5080 5266 -891 2229 99 0 13 chr17 13226020 13226324 -76278229 - AluSq SINE Alu -13 300 1 735 235 9 50 chr17 13226324 13226392 -76278161 + L1MD2 LINE L1 5266 5335 -822 1090 128 17 22 chr17 13226393 13226572 -76277981 + MLT1B LTR MaLR 1 178 -212 2106 108 20 7 chr17 13226572 13226877 -76277676 + AluSc SINE Alu 1 309 0 209 122 49 0 chr17 13226880 13226921 -76277632 + A-rich Low_complexity Low_complexity 3 45 0 435 145 12 0 chr17 13226970 13227053 -76277500 + MLT1B LTR MaLR 192 275 -115 660 164 35 0 chr17 13227089 13227205 -76277348 + MLT1B LTR MaLR 269 388 -2 3947 186 67 38 chr17 13227206 13228187 -76276366 + L1MD2 LINE L1 5331 6340 -19 2273 129 72 33 chr17 13228428 13228932 -76275621 + MLT2A2 LTR ERVL 1 547 -7 2274 89 3 32 chr17 13228998 13229313 -76275240 + AluSp SINE Alu 3 308 -5 453 228 32 3 chr17 13229656 13229770 -76274783 + L1MC/D LINE L1 5528 5643 -522 2223 108 3 3 chr17 13229818 13230124 -76274429 + AluSq SINE Alu 3 308 -5 1827 198 20 2 chr17 13231665 13232064 -76272489 - L1MB5 LINE L1 -9 6165 5760 278 307 33 39 chr17 13232170 13232323 -76272230 - L1M4 LINE L1 -6275 267 116 1085 269 45 8 chr17 13234375 13234776 -76269777 + L1ME2 LINE L1 2417 2832 -3314 426 279 32 19 chr17 13234815 13234969 -76269584 + AluJo SINE Alu 74 229 -83 183 129 0 0 chr17 13234969 13235000 -76269553 + (A)n Simple_repeat Simple_repeat 1 31 0 1583 274 89 52 chr17 13235000 13236005 -76268548 + L1ME2 LINE L1 2814 3855 -2291 246 228 0 0 chr17 13236317 13236374 -76268179 + L1 LINE L1 4255 4311 -1835 8653 173 11 17 chr17 13236687 13238960 -76265593 + L1PB3 LINE L1 3537 5789 -365 241 180 33 16 chr17 13238961 13239022 -76265531 + (TA)n Simple_repeat Simple_repeat 1 62 0 340 130 0 4 chr17 13239023 13239080 -76265473 - L1MB5 LINE L1 -374 5780 5735 261 0 0 0 chr17 13239108 13239137 -76265416 + (CA)n Simple_repeat Simple_repeat 1 29 0 2408 115 14 0 chr17 13239137 13239494 -76265059 + L1PB3 LINE L1 5793 6154 0 2211 255 71 1 chr17 13239500 13240179 -76264374 + L1ME2 LINE L1 3841 4566 -1580 21 0 0 0 chr17 13240309 13240330 -76264223 + AT_rich Low_complexity Low_complexity 1 21 0 305 233 0 58 chr17 13240480 13240566 -76263987 - L2 LINE L2 0 3313 3233 1663 230 53 13 chr17 13240838 13241312 -76263241 + L1ME2 LINE L1 5499 5991 -173 405 226 0 17 chr17 13241333 13241448 -76263105 + L1MA10 LINE L1 6220 6332 -2 42 0 0 0 chr17 13242802 13242844 -76261709 + AT_rich Low_complexity Low_complexity 1 42 0 2242 86 0 0 chr17 13243023 13243303 -76261250 + AluSg1 SINE Alu 21 300 -9 1696 94 123 7 chr17 13243668 13243944 -76260609 + AluSg1 SINE Alu 1 308 -1 241 299 176 25 chr17 13244577 13244821 -76259732 - L2 LINE L2 -525 2789 2509 1605 229 16 8 chr17 13244834 13245205 -76259348 - MLT1A2 LTR MaLR 0 374 1 195 69 0 0 chr17 13245213 13245242 -76259311 + (CA)n Simple_repeat Simple_repeat 2 30 0 503 355 65 48 chr17 13245744 13246263 -76258290 - L2 LINE L2 -23 3249 2738 448 202 183 47 chr17 13246568 13246781 -76257772 - MLT1K LTR MaLR -2 586 345 988 176 136 10 chr17 13247178 13247377 -76257176 - MER58A DNA MER1_type 0 224 1 2195 105 3 7 chr17 13248758 13249053 -76255500 + AluSx SINE Alu 1 294 -18 266 293 98 8 chr17 13249899 13250032 -76254521 + L2 LINE L2 2836 2980 -292 200 327 40 20 chr17 13250059 13250160 -76254393 + MIR SINE MIR 90 192 -70 415 145 66 0 chr17 13250321 13250397 -76254156 - L1MA9 LINE L1 -147 6165 6085 321 336 72 28 chr17 13250569 13250929 -76253624 + HAL1b LINE L1 399 774 -574 716 189 182 0 chr17 13252365 13252524 -76252029 + MER5A DNA MER1_type 1 188 -1 188 295 16 109 chr17 13252702 13252885 -76251668 + MIR3 SINE MIR 41 206 -2 311 272 35 58 chr17 13253592 13253765 -76250788 + L1MEd LINE L1 913 1081 -5038 329 284 28 8 chr17 13253852 13254022 -76250531 - L1MEc LINE L1 -3403 2812 2640 694 262 66 44 chr17 13254075 13254443 -76250110 - L1MEc LINE L1 -3708 2507 2172 264 310 25 30 chr17 13254454 13254654 -76249899 - L1MEc LINE L1 -4322 2074 1876 1801 146 0 0 chr17 13255983 13256258 -76248295 + MER57A LTR ERV1 1 275 -128 445 154 0 22 chr17 13256328 13256419 -76248134 + MER53 DNA DNA 98 186 -3 1240 198 83 22 chr17 13256779 13257142 -76247411 - MER3 DNA MER1_type 0 2624 2240 305 204 45 11 chr17 13257138 13257240 -76247313 - MER3 DNA MER1_type -86 123 81 * 2122 138 29 9 chr17 13258224 13258565 -76245988 - MER7A DNA MER2_type 0 346 1 362 292 21 0 chr17 13258967 13259063 -76245490 + MIR SINE MIR 57 154 -108 21 0 0 0 chr17 13259323 13259344 -76245209 + AT_rich Low_complexity Low_complexity 1 21 0 3092 199 73 34 chr17 13260112 13261243 -76243310 - L1MB7 LINE L1 0 6184 4977 1786 191 0 0 chr17 13261243 13261541 -76243012 - AluSx SINE Alu -14 298 1 3092 199 73 34 chr17 13261541 13261877 -76242676 - L1MB7 LINE L1 -1207 4977 4656 22 35 0 0 chr17 13261950 13261979 -76242574 + AT_rich Low_complexity Low_complexity 1 29 0 1452 40 51 0 chr17 13262151 13262328 -76242225 - AluY SINE Alu -5 306 121 2256 105 10 0 chr17 13262648 13262944 -76241609 - AluSp SINE Alu -14 299 1 274 327 97 14 chr17 13262957 13263174 -76241379 - L1ME LINE L1 -306 6144 5910 296 314 31 31 chr17 13263222 13263445 -76241108 - L1ME LINE L1 -3375 3051 2829 1773 135 66 3 chr17 13263572 13263861 -76240692 - AluSx SINE Alu -5 307 1 304 306 20 34 chr17 13263862 13264009 -76240544 - L1ME LINE L1 -3956 2470 2326 25 51 0 0 chr17 13264009 13264048 -76240505 + AT_rich Low_complexity Low_complexity 1 39 0 1662 265 131 16 chr17 13264048 13264844 -76239709 - L1ME3A LINE L1 -19 6545 5659 1035 206 56 28 chr17 13264950 13265409 -76239144 - MLT1E2 LTR MaLR -54 571 89 273 242 158 47 chr17 13265574 13265871 -76238682 - L1ME3A LINE L1 -1072 5468 5139 298 302 112 19 chr17 13265952 13266379 -76238174 - L1ME3A LINE L1 -4531 2009 1543 329 304 51 34 chr17 13266696 13266933 -76237620 - L1MDa LINE L1 -860 1630 1294 363 269 12 35 chr17 13267033 13267204 -76237349 - L1MDa LINE L1 -4918 1201 1035 259 330 33 33 chr17 13267434 13267649 -76236904 - L1MDa LINE L1 -5305 814 600 315 335 39 68 chr17 13267911 13268102 -76236451 - HAL1 LINE L1 -1129 1378 1196 2333 101 10 0 chr17 13268102 13268409 -76236144 - AluSx SINE Alu -2 310 1 315 335 39 68 chr17 13268409 13268498 -76236055 - HAL1 LINE L1 -1311 1196 1106 2217 88 13 10 chr17 13268820 13269126 -76235427 - AluSq SINE Alu -6 307 1 589 240 47 0 chr17 13269838 13269967 -76234586 + MLT1E LTR MaLR 1 135 -458 1293 266 56 43 chr17 13270026 13270489 -76234064 + MLT1E LTR MaLR 119 587 -6 2420 80 0 16 chr17 13270532 13270843 -76233710 + AluSc SINE Alu 3 308 -1 330 300 106 0 chr17 13271126 13271285 -76233268 - MIR SINE MIR -56 206 20 2159 98 0 36 chr17 13271815 13272121 -76232432 + AluSg SINE Alu 1 295 -15 403 209 76 9 chr17 13272431 13272536 -76232017 + MLT1E2 LTR MaLR 397 508 -118 3778 268 95 64 chr17 13272542 13274225 -76230328 - L2 LINE L2 -780 2534 800 2462 93 3 0 chr17 13274503 13274814 -76229739 - AluSx SINE Alu 0 312 1 267 105 250 13 chr17 13274869 13274945 -76229608 - L1ME2 LINE L1 -1 6163 6070 504 89 0 0 chr17 13274961 13275040 -76229513 - Alu SINE Alu 0 312 234 2358 224 74 33 chr17 13275044 13275594 -76228959 - L1ME2 LINE L1 -85 6079 5553 1328 190 42 48 chr17 13275594 13275930 -76228623 - AluJo SINE Alu 0 312 1 2358 224 74 33 chr17 13275930 13276681 -76227872 - L1ME2 LINE L1 -611 5553 4695 2467 81 0 7 chr17 13276681 13276988 -76227565 + AluSq SINE Alu 1 305 -8 2358 224 74 33 chr17 13276988 13277317 -76227236 - L1ME2 LINE L1 -1469 4695 4381 1996 173 46 0 chr17 13277318 13277687 -76226866 - MSTB LTR MaLR 0 426 41 2412 81 0 0 chr17 13277688 13277995 -76226558 + AluY SINE Alu 2 308 -3 1290 94 0 6 chr17 13278027 13278197 -76226356 + AluSc SINE Alu 125 293 -16 288 192 0 0 chr17 13278197 13278249 -76226304 - MSTB LTR MaLR -374 52 1 5058 213 115 50 chr17 13278261 13278875 -76225678 - L1MC3 LINE L1 -10 7775 7202 2382 88 3 0 chr17 13278875 13279172 -76225381 + AluSp SINE Alu 1 298 -15 5058 213 115 50 chr17 13279172 13280343 -76224210 - L1MC3 LINE L1 -583 7202 5874 232 261 45 9 chr17 13281408 13281519 -76223034 + LTR33A LTR ERVL 405 519 -4 2353 112 0 0 chr17 13281593 13281906 -76222647 + AluSq SINE Alu 1 313 0 309 181 32 85 chr17 13282449 13282543 -76222010 - MIR SINE MIR -113 149 61 416 239 246 7 chr17 13283565 13283707 -76220846 + MER5B DNA MER1_type 1 176 -2 260 182 15 76 chr17 13283707 13283762 -76220791 - MIR3 SINE MIR -50 158 108 308 234 129 16 chr17 13285083 13285207 -76219346 + MIR SINE MIR 66 203 -59 531 204 54 54 chr17 13285863 13286010 -76218543 + MIR SINE MIR 51 197 -65 444 299 68 7 chr17 13286758 13286905 -76217648 + MIR3 SINE MIR 7 162 -46 426 265 75 20 chr17 13286938 13287085 -76217468 + MIR SINE MIR 35 189 -73 439 179 0 63 chr17 13287371 13287466 -76217087 - MER58C DNA MER1_type 0 215 127 276 263 90 8 chr17 13287582 13287715 -76216838 - MLT1J2 LTR MaLR -44 406 263 402 257 0 0 chr17 13287746 13287851 -76216702 - MER58C DNA MER1_type -110 105 1 1362 206 124 33 chr17 13288080 13288147 -76216406 - MLT1C LTR MaLR 0 467 408 2374 59 0 0 chr17 13288147 13288436 -76216117 + AluY SINE Alu 1 289 -22 1362 206 124 33 chr17 13288436 13288796 -76215757 - MLT1C LTR MaLR -59 408 1 216 336 29 7 chr17 13289654 13289791 -76214762 - L2 LINE L2 -1651 1663 1524 540 266 0 28 chr17 13289924 13290067 -76214486 + MIR SINE MIR 92 230 -32 209 160 0 40 chr17 13290253 13290303 -76214250 + (CAT)n Simple_repeat Simple_repeat 3 50 0 243 288 68 0 chr17 13291597 13291670 -76212883 - MLT1J2 LTR MaLR -124 326 249 310 283 113 0 chr17 13291751 13291857 -76212696 - MLT1J2 LTR MaLR -332 118 1 667 240 87 15 chr17 13292380 13292576 -76211977 - MIR SINE MIR -2 260 51 1209 261 40 29 chr17 13293232 13293684 -76210869 - L1MDa LINE L1 -1994 4546 4090 1949 161 3 16 chr17 13293684 13293995 -76210558 - AluJb SINE Alu -5 307 1 952 144 0 11 chr17 13294009 13294189 -76210364 + (TTCC)n Simple_repeat Simple_repeat 2 179 0 3057 233 75 33 chr17 13294195 13295520 -76209033 - L1MDa LINE L1 -2472 4068 2688 302 96 0 19 chr17 13295523 13295575 -76208978 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 6178 85 13 0 chr17 13295611 13296748 -76207805 - L1PB1 LINE L1 0 6151 5004 2130 223 92 55 chr17 13296792 13297983 -76206570 - L1MDa LINE L1 -3894 2646 1412 2492 233 12 16 chr17 13298044 13298836 -76205717 + L1M4 LINE L1 4630 5420 -743 2394 74 0 0 chr17 13299467 13299765 -76204788 + AluY SINE Alu 1 298 -13 531 240 161 65 chr17 13299908 13300125 -76204428 + MIR SINE MIR 11 248 -14 295 341 79 64 chr17 13300647 13300914 -76203639 - L2 LINE L2 -2844 470 200 564 323 102 73 chr17 13301460 13301912 -76202641 - L1MDa LINE L1 -5589 941 477 371 248 67 0 chr17 13304141 13304246 -76200307 + MIR SINE MIR 37 148 -114 416 138 53 32 chr17 13304279 13304337 -76200216 - MER53 DNA DNA 0 189 127 2392 93 0 3 chr17 13304337 13304650 -76199903 - AluSq SINE Alu -1 312 1 416 138 53 32 chr17 13304650 13304685 -76199868 - MER53 DNA DNA -62 127 94 673 264 67 57 chr17 13305202 13305408 -76199145 - L1ME4a LINE L1 -1 6120 5917 2390 88 0 0 chr17 13305408 13305705 -76198848 - AluSc SINE Alu -12 297 1 673 264 67 57 chr17 13305705 13305911 -76198642 - L1ME4a LINE L1 -204 5917 5700 2666 35 0 7 chr17 13305911 13306221 -76198332 + AluY SINE Alu 1 308 -3 673 264 67 57 chr17 13306221 13306318 -76198235 - L1ME4a LINE L1 -421 5700 5605 4672 118 18 3 chr17 13306331 13307059 -76197494 - L1MA2 LINE L1 -5 6299 5561 514 241 30 106 chr17 13307076 13307313 -76197240 - MIR SINE MIR -7 255 37 276 311 109 0 chr17 13307561 13307680 -76196873 - MIR SINE MIR -98 164 33 226 232 0 18 chr17 13307948 13308004 -76196549 + (CATA)n Simple_repeat Simple_repeat 3 57 0 337 344 117 23 chr17 13308382 13308777 -76195776 - L1ME4a LINE L1 -1316 4830 4399 382 343 108 21 chr17 13309209 13309541 -76195012 - L1ME4a LINE L1 -2210 3936 3576 270 313 0 0 chr17 13309642 13309738 -76194815 - L1ME4a LINE L1 -2685 3461 3366 539 343 77 32 chr17 13310027 13310745 -76193808 - L1ME4a LINE L1 -3085 3061 2312 223 359 8 0 chr17 13310816 13310933 -76193620 + MIR SINE MIR 132 249 -13 2262 85 0 3 chr17 13310968 13311250 -76193303 - AluSx SINE Alu -14 298 18 541 283 36 0 chr17 13311892 13312058 -76192495 - MER20 DNA MER1_type 0 219 48 1892 220 79 0 chr17 13312060 13312551 -76192002 + MER74A LTR ERVL 2 531 -27 2224 96 0 0 chr17 13312569 13312881 -76191672 - AluSc SINE Alu 0 312 1 193 318 36 55 chr17 13312918 13313028 -76191525 - MER5A DNA MER1_type -74 115 8 280 345 220 11 chr17 13313405 13313582 -76190971 + L2 LINE L2 3059 3272 0 192 152 0 0 chr17 13314160 13314193 -76190360 + T-rich Low_complexity Low_complexity 1 33 0 211 284 0 42 chr17 13315022 13315117 -76189436 + CT-rich Low_complexity Low_complexity 3 93 0 1864 198 118 82 chr17 13315495 13316214 -76188339 + LTR1B LTR ERV1 1 745 -81 558 178 17 106 chr17 13316699 13316879 -76187674 - L1MA10 LINE L1 -3 6331 6168 1536 189 60 0 chr17 13316883 13317184 -76187369 - L1MC1 LINE L1 0 6333 6015 289 316 53 27 chr17 13317638 13317825 -76186728 + L2 LINE L2 2845 3036 -277 834 247 46 0 chr17 13317899 13318093 -76186460 - MER3 DNA MER1_type -1 208 6 2229 115 3 0 chr17 13320206 13320501 -76184052 + AluSp SINE Alu 1 296 -17 725 212 34 50 chr17 13320622 13320801 -76183752 + FRAM SINE Alu 1 40 0 2341 60 0 7 chr17 13320806 13321111 -76183442 + AluY SINE Alu 1 303 0 637 249 56 60 chr17 13321623 13321892 -76182661 + L2 LINE L2 3046 3313 0 469 130 0 0 chr17 13322313 13322390 -76182163 + L1P4 LINE L1 5456 5532 -629 206 116 23 0 chr17 13322671 13322714 -76181839 + GA-rich Low_complexity Low_complexity 2 45 0 2197 95 20 0 chr17 13322780 13323075 -76181478 + AluSg SINE Alu 1 301 -9 752 332 100 0 chr17 13323213 13323553 -76181000 - MLT1I LTR MaLR 0 409 36 513 323 156 23 chr17 13323672 13323945 -76180608 - L2 LINE L2 -803 2511 2276 470 278 37 0 chr17 13323945 13324053 -76180500 - MER81 DNA DNA -1 113 2 513 323 156 23 chr17 13324053 13324300 -76180253 - L2 LINE L2 -1038 2276 1922 8694 196 65 69 chr17 13324781 13325810 -76178743 - L1 LINE L1 -830 5316 4284 225 0 0 0 chr17 13325810 13325835 -76178718 + (TG)n Simple_repeat Simple_repeat 2 26 0 8694 196 65 69 chr17 13325835 13326452 -76178101 - L1 LINE L1 -1862 4284 3666 180 0 0 0 chr17 13326452 13326472 -76178081 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8694 196 65 69 chr17 13326472 13326710 -76177843 - L1 LINE L1 -2480 3666 3429 2568 50 0 0 chr17 13326710 13327011 -76177542 - AluYa5 SINE Alu -9 302 2 8694 196 65 69 chr17 13327011 13327344 -76177209 - L1 LINE L1 -2717 3429 3096 186 43 0 0 chr17 13327344 13327367 -76177186 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8694 196 65 69 chr17 13327367 13327798 -76176755 - L1 LINE L1 -3050 3096 2676 297 216 0 0 chr17 13327801 13327852 -76176701 + Tigger1 DNA MER2_type 2368 2418 0 3469 185 86 31 chr17 13327853 13328763 -76175790 - L1MDa LINE L1 -4318 2222 1263 2187 102 0 7 chr17 13328772 13329066 -76175487 - AluSx SINE Alu -7 305 14 2031 262 65 68 chr17 13329104 13329409 -76175144 - L1MDa LINE L1 -5445 1095 790 2392 94 3 0 chr17 13329409 13329707 -76174846 - AluSp SINE Alu -14 299 1 2031 262 65 68 chr17 13329707 13330314 -76174239 - L1MDa LINE L1 -5750 790 22 23 68 0 0 chr17 13330486 13330530 -76174023 + AT_rich Low_complexity Low_complexity 1 44 0 819 301 68 51 chr17 13330605 13331447 -76173106 + L1ME4a LINE L1 5265 6120 -1 523 318 73 17 chr17 13331481 13331714 -76172839 - MLT1L LTR MaLR -129 486 241 403 295 29 43 chr17 13332262 13332469 -76172084 + MIR3 SINE MIR 3 206 -2 454 232 43 29 chr17 13332955 13333093 -76171460 + MIR SINE MIR 50 189 -73 366 317 72 41 chr17 13333651 13334070 -76170483 + L1MC/D LINE L1 4881 5312 -834 23 0 0 0 chr17 13334117 13334140 -76170413 + AT_rich Low_complexity Low_complexity 1 23 0 307 330 76 39 chr17 13334189 13334312 -76170241 + L1MC/D LINE L1 5442 5559 -2249 2296 110 0 0 chr17 13334312 13334620 -76169933 + AluSq SINE Alu 1 308 -5 307 330 76 39 chr17 13334620 13334851 -76169702 + L1MC/D LINE L1 5559 5809 -1999 1183 219 76 17 chr17 13335024 13335326 -76169227 + L1MD3 LINE L1 7640 7959 -36 2523 69 0 3 chr17 13335356 13335659 -76168894 + AluSx SINE Alu 1 302 -10 258 239 0 28 chr17 13336803 13336874 -76167679 - L1MD3 LINE L1 -76 7919 7851 249 287 67 62 chr17 13337093 13337302 -76167251 - L2 LINE L2 -337 2977 2768 1994 187 23 41 chr17 13337309 13337470 -76167083 + MLT1B LTR MaLR 1 163 -227 2259 100 3 7 chr17 13337470 13337770 -76166783 - AluSx SINE Alu -13 299 1 1994 187 23 41 chr17 13337770 13337999 -76166554 + MLT1B LTR MaLR 163 384 -6 258 365 19 9 chr17 13338164 13338224 -76166329 + MER91C DNA MER1_type 5 63 -77 16261 125 14 24 chr17 13338224 13338405 -76166148 - Tigger1 DNA MER2_type 0 2418 2237 2215 108 3 0 chr17 13338405 13338702 -76165851 + AluSx SINE Alu 1 298 -14 16261 125 14 24 chr17 13338702 13339968 -76164585 - Tigger1 DNA MER2_type -181 2237 960 2214 91 7 0 chr17 13339968 13340297 -76164256 - AluSp SINE Alu 0 331 1 16261 125 14 24 chr17 13340297 13341053 -76163500 - Tigger1 DNA MER2_type -1458 960 236 2382 90 0 3 chr17 13341053 13341352 -76163201 + AluSg SINE Alu 1 298 -12 16261 125 14 24 chr17 13341352 13341585 -76162968 - Tigger1 DNA MER2_type -2182 236 2 258 365 19 9 chr17 13341585 13341631 -76162922 + MER91C DNA MER1_type 63 112 -28 281 353 55 35 chr17 13341677 13341966 -76162587 - L2 LINE L2 -741 2573 2279 2162 134 0 7 chr17 13342088 13342417 -76162136 + AluSx SINE Alu 1 312 0 213 283 75 0 chr17 13342611 13342664 -76161889 - L2 LINE L2 -2 3311 3255 368 225 297 7 chr17 13344773 13344911 -76159642 - MER5A DNA MER1_type 0 189 12 440 291 77 39 chr17 13345307 13345489 -76159064 + MIR3 SINE MIR 15 203 -5 330 235 34 141 chr17 13345612 13345801 -76158752 + MIR SINE MIR 8 169 -93 573 221 9 0 chr17 13345801 13345914 -76158639 + MER81 DNA DNA 1 114 0 330 235 34 141 chr17 13345914 13345958 -76158595 + MIR SINE MIR 169 216 -46 2371 74 3 0 chr17 13346021 13346306 -76158247 - AluSp SINE Alu -15 298 13 495 260 31 0 chr17 13347108 13347235 -76157318 - MER94 DNA DNA -3 131 1 193 220 40 0 chr17 13348064 13348114 -76156439 + L3 LINE CR1 1524 1575 -2 422 326 56 69 chr17 13349326 13349559 -76154994 + L2 LINE L2 3024 3253 -19 180 0 0 0 chr17 13350267 13350287 -76154266 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6908 79 44 0 chr17 13350292 13351436 -76153117 - L1PA8A LINE L1 -13 6118 4955 2012 191 17 0 chr17 13351436 13351781 -76152772 - MER82 DNA MER2_type -302 351 1 708 197 77 11 chr17 13351781 13351964 -76152589 + L1MC5 LINE L1 7732 7926 -35 315 0 0 0 chr17 13352797 13352832 -76151721 + (TG)n Simple_repeat Simple_repeat 2 36 0 186 404 0 0 chr17 13353059 13353163 -76151390 - MIR SINE MIR 0 262 159 3586 151 76 0 chr17 13353455 13354092 -76150461 - L1MC3 LINE L1 -14 7771 5609 373 263 0 0 chr17 13354101 13354181 -76150372 + L2 LINE L2 3234 3313 0 772 166 47 64 chr17 13355248 13355483 -76149070 - Charlie5 DNA MER1_type -29 2583 2353 667 239 13 0 chr17 13355486 13355641 -76148912 - Charlie5 DNA MER1_type -2416 196 40 403 288 63 21 chr17 13355650 13355841 -76148712 - L2 LINE L2 -198 3115 2917 2764 155 34 8 chr17 13356918 13357389 -76147164 + L1MA8 LINE L1 5799 6281 -10 1185 123 0 0 chr17 13357585 13357755 -76146798 + AluSg/x SINE Alu 125 294 -16 584 105 0 11 chr17 13357755 13357850 -76146703 + (GGGGA)n Simple_repeat Simple_repeat 3 96 0 238 313 188 10 chr17 13358285 13358493 -76146060 + L3 LINE CR1 1310 1554 -23 2199 115 0 13 chr17 13358664 13358976 -76145577 - AluSx SINE Alu -4 308 1 1612 173 39 3 chr17 13359144 13359428 -76145125 - AluJo SINE Alu -18 294 1 2214 98 14 0 chr17 13359672 13359969 -76144584 - AluSp SINE Alu -12 301 1 799 254 96 96 chr17 13361330 13361728 -76142825 - MLT1J LTR MaLR -2 509 112 2208 126 7 0 chr17 13361958 13362267 -76142286 + AluSx SINE Alu 1 311 -1 2347 82 10 0 chr17 13364736 13365039 -76139514 + AluSp SINE Alu 1 306 -7 885 261 68 5 chr17 13365043 13365265 -76139288 - MIR SINE MIR -21 241 6 542 260 64 64 chr17 13366173 13366392 -76138161 + LTR16A LTR ERVL 61 279 -171 931 175 58 153 chr17 13366393 13366554 -76137999 - MER96B DNA MER1_type? 0 417 242 2218 97 0 0 chr17 13366554 13366833 -76137720 - AluSc SINE Alu -29 280 2 931 175 58 153 chr17 13366833 13366855 -76137698 - MER96B DNA MER1_type? -175 242 220 1481 185 3 60 chr17 13366855 13367157 -76137396 + AluJo SINE Alu 5 289 -23 931 175 58 153 chr17 13367157 13367418 -76137135 - MER96B DNA MER1_type? -197 220 14 278 313 18 37 chr17 13367432 13367595 -76136958 + LTR16A1 LTR ERVL 298 457 0 228 336 71 71 chr17 13367639 13367850 -76136703 + MIR SINE MIR 48 258 -4 6665 88 17 0 chr17 13368764 13369735 -76134818 - L1PA13 LINE L1 0 6163 5170 1681 162 4 0 chr17 13370229 13370629 -76133924 - AluSx SINE Alu 0 445 45 616 214 81 35 chr17 13370735 13370908 -76133645 - MIR SINE MIR -66 196 16 452 274 32 16 chr17 13371372 13371496 -76133057 - MIR3 SINE MIR -48 160 35 245 193 70 0 chr17 13371772 13371829 -76132724 + MIR SINE MIR 81 141 -121 494 175 68 10 chr17 13372447 13372550 -76132003 - MIR3 SINE MIR -48 160 52 2469 132 5 70 chr17 13373561 13373978 -76130575 - MLT1B LTR MaLR 0 390 1 904 202 14 69 chr17 13374092 13374310 -76130243 + MER63A DNA MER1_type 1 206 -4 339 233 91 62 chr17 13374954 13375130 -76129423 + HAL1 LINE L1 1208 1388 -1119 324 376 49 0 chr17 13375667 13375872 -76128681 + L2 LINE L2 2525 2739 -575 2285 75 0 7 chr17 13376028 13376309 -76128244 - AluSc SINE Alu -14 295 17 449 275 16 28 chr17 13376549 13376731 -76127822 - MER104 DNA MER2_type 0 180 1 317 330 104 0 chr17 13376754 13376869 -76127684 - L2 LINE L2 -5 3308 3182 191 296 67 89 chr17 13376883 13377018 -76127535 + L2 LINE L2 3141 3272 0 6162 41 0 0 chr17 13377791 13378653 -76125900 + L1PA5 LINE L1 5236 6154 0 577 232 58 0 chr17 13379154 13379292 -76125261 - MLT1A1 LTR MaLR -77 288 143 344 284 101 0 chr17 13379292 13379401 -76125152 - MIR SINE MIR -71 137 18 2347 99 0 0 chr17 13380635 13380938 -76123615 - AluY SINE Alu 0 311 9 284 298 93 40 chr17 13381328 13381479 -76123074 + MIR SINE MIR 85 243 -19 2280 97 3 0 chr17 13381761 13382059 -76122494 - AluSq SINE Alu -14 299 1 212 250 0 0 chr17 13382278 13382322 -76122231 + MIR3 SINE MIR 117 160 -48 376 339 205 7 chr17 13382337 13382747 -76121806 - L2 LINE L2 -10 3303 2813 438 284 23 51 chr17 13382972 13383187 -76121366 - LTR33 LTR ERVL -294 227 19 637 312 35 9 chr17 13383230 13383461 -76121092 - L2 LINE L2 -541 2773 2537 243 96 0 0 chr17 13384480 13384532 -76120021 - LTR66 LTR ERVL -165 445 394 309 211 22 33 chr17 13384556 13384646 -76119907 + L1MC4 LINE L1 6616 6704 -1338 462 31 132 0 chr17 13384663 13384822 -76119731 + (TA)n Simple_repeat Simple_repeat 1 180 0 436 24 100 41 chr17 13384836 13385006 -76119547 + (TA)n Simple_repeat Simple_repeat 1 180 0 42 36 0 0 chr17 13385006 13385062 -76119491 + AT_rich Low_complexity Low_complexity 1 56 0 424 34 134 0 chr17 13385062 13385211 -76119342 + (TA)n Simple_repeat Simple_repeat 2 170 0 444 282 67 7 chr17 13385676 13385825 -76118728 + MIR SINE MIR 105 262 0 351 167 0 0 chr17 13386584 13386650 -76117903 + (CAT)n Simple_repeat Simple_repeat 1 66 0 720 267 51 51 chr17 13386656 13386892 -76117661 - MIR SINE MIR -12 250 15 4400 29 8 0 chr17 13387663 13388183 -76116370 - L1P LINE L1 -855 5291 4768 4280 11 0 0 chr17 13388176 13388649 -76115904 + L1HS LINE L1 5682 6154 -1 * 910 256 160 0 chr17 13390024 13390262 -76114291 + AluYa8 SINE Alu 3 278 -32 485 35 35 35 chr17 13390262 13390347 -76114206 + (TAAAA)n Simple_repeat Simple_repeat 1 85 0 2138 112 16 3 chr17 13390386 13390741 -76113812 + AluSq SINE Alu 1 359 0 524 346 41 68 chr17 13390741 13391405 -76113148 - L2 LINE L2 -438 2876 2231 265 304 112 0 chr17 13392294 13392419 -76112134 + L2 LINE L2 3170 3308 -5 469 256 44 0 chr17 13392820 13392957 -76111596 + MER69 DNA AcHobo 2384 2526 0 2382 101 0 0 chr17 13393004 13393311 -76111242 - AluSg SINE Alu -3 307 1 404 299 51 43 chr17 13393325 13393559 -76110994 + MER102b DNA MER1_type 103 338 -3 2054 131 19 25 chr17 13393637 13393824 -76110729 - AluJb SINE Alu 0 312 126 402 21 0 0 chr17 13393824 13393871 -76110682 + (TG)n Simple_repeat Simple_repeat 2 48 0 2054 131 19 25 chr17 13393871 13393997 -76110556 - AluJb SINE Alu -186 126 1 1207 169 86 12 chr17 13394428 13394671 -76109882 + MLT1E1 LTR MaLR 1 261 -393 2294 95 7 0 chr17 13394679 13394984 -76109569 + AluSp SINE Alu 1 307 -6 1172 213 17 9 chr17 13395025 13395255 -76109298 + MLT1E1 LTR MaLR 405 636 -18 1982 131 6 22 chr17 13395381 13395695 -76108858 + AluSx SINE Alu 1 309 -3 296 326 35 21 chr17 13395704 13395845 -76108708 - MIR SINE MIR -42 220 78 448 81 27 0 chr17 13396320 13396394 -76108159 + (CA)n Simple_repeat Simple_repeat 2 77 0 1769 208 66 37 chr17 13396836 13397318 -76107235 + MLT1D LTR MaLR 7 502 -3 216 308 15 0 chr17 13401077 13401142 -76103411 + CT-rich Low_complexity Low_complexity 1 66 0 558 235 111 51 chr17 13401507 13401741 -76102812 + MIR SINE MIR 15 262 0 261 281 97 0 chr17 13401752 13401866 -76102687 + MIR3 SINE MIR 81 205 -3 469 179 234 7 chr17 13402319 13402464 -76102089 + MER53 DNA DNA 12 189 0 1964 63 0 0 chr17 13402481 13402718 -76101835 - AluY SINE Alu -8 303 67 209 385 0 0 chr17 13403521 13403625 -76100928 + MIR3 SINE MIR 98 201 -7 348 243 146 73 chr17 13403840 13404046 -76100507 + L2 LINE L2 3045 3265 -48 220 200 0 0 chr17 13404081 13404126 -76100427 + L2 LINE L2 3265 3309 -4 214 143 0 0 chr17 13404955 13404990 -76099563 + MIR SINE MIR 110 144 -64 356 314 57 33 chr17 13406245 13406490 -76098063 - L1ME4a LINE L1 -188 5933 5683 338 198 198 0 chr17 13406948 13407034 -76097519 - MIR SINE MIR -64 198 96 207 300 0 0 chr17 13407484 13407534 -76097019 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 404 308 93 31 chr17 13407588 13407909 -76096644 + L1MC4a LINE L1 4910 5250 -896 231 274 101 16 chr17 13407955 13408155 -76096398 + L1MC4a LINE L1 5327 5542 -579 301 276 20 66 chr17 13408217 13408369 -76096184 + L1MC4a LINE L1 5722 5866 -1942 2079 96 0 4 chr17 13408443 13408723 -76095830 + AluY SINE Alu 1 279 -32 243 0 0 0 chr17 13408723 13408750 -76095803 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 447 19 0 0 chr17 13409108 13409160 -76095393 + (CA)n Simple_repeat Simple_repeat 1 52 0 371 181 101 94 chr17 13409263 13409412 -76095141 + L1ME4a LINE L1 5954 6103 -18 373 326 27 45 chr17 13409667 13409888 -76094665 + MIR SINE MIR 42 258 -4 3012 66 14 0 chr17 13409926 13410289 -76094264 + L1PA12 LINE L1 5801 6168 0 2480 65 0 0 chr17 13410297 13410590 -76093963 + AluY SINE Alu 1 293 -18 2425 82 0 0 chr17 13410752 13411057 -76093496 - AluSc SINE Alu -4 305 1 1745 97 0 9 chr17 13411518 13411804 -76092749 - AluY SINE Alu 0 343 60 276 259 62 12 chr17 13411838 13411919 -76092634 - MIR SINE MIR -66 142 58 29 0 0 0 chr17 13412065 13412094 -76092459 + AT_rich Low_complexity Low_complexity 1 29 0 211 175 16 16 chr17 13412406 13412469 -76092084 + (TA)n Simple_repeat Simple_repeat 2 64 0 363 270 121 66 chr17 13412608 13412897 -76091656 + L1ME4a LINE L1 5813 6117 -4 369 271 71 27 chr17 13413174 13413337 -76091216 - MIR SINE MIR -67 141 19 598 296 15 29 chr17 13413822 13414028 -76090525 - MIR SINE MIR -58 204 2 228 167 0 0 chr17 13416332 13416380 -76088173 + CT-rich Low_complexity Low_complexity 2 49 0 222 150 0 0 chr17 13416418 13416458 -76088095 + (CA)n Simple_repeat Simple_repeat 1 40 0 495 353 6 18 chr17 13416590 13416752 -76087801 + L2 LINE L2 3096 3256 -12 212 83 0 28 chr17 13416752 13416788 -76087765 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 231 88 0 0 chr17 13416951 13416985 -76087568 + (TC)n Simple_repeat Simple_repeat 1 34 0 741 222 11 72 chr17 13417352 13417431 -76087122 - MER45A DNA AcHobo -1412 169 87 2201 120 0 3 chr17 13417431 13417732 -76086821 + AluSg SINE Alu 1 300 -10 741 222 11 72 chr17 13417732 13417832 -76086721 - MER45A DNA AcHobo -1494 87 1 1820 170 0 13 chr17 13417880 13418180 -76086373 + AluSx SINE Alu 1 296 -16 2151 104 7 7 chr17 13418189 13418488 -76086065 + AluSx SINE Alu 1 299 -13 435 236 155 35 chr17 13419089 13419263 -76085290 - MIR3 SINE MIR -12 196 2 194 295 13 64 chr17 13420100 13420178 -76084375 - MIR3 SINE MIR -39 169 96 21 0 0 0 chr17 13420493 13420514 -76084039 + AT_rich Low_complexity Low_complexity 1 21 0 391 72 62 31 chr17 13421293 13421390 -76083163 + CT-rich Low_complexity Low_complexity 1 100 0 776 91 8 54 chr17 13421396 13421640 -76082913 + (TTCC)n Simple_repeat Simple_repeat 1 232 0 227 245 0 61 chr17 13421902 13422000 -76082553 + T-rich Low_complexity Low_complexity 5 96 0 2227 94 3 0 chr17 13422416 13422702 -76081851 + AluSx SINE Alu 1 287 -25 351 292 112 62 chr17 13422997 13423302 -76081251 + L1ME LINE L1 5255 5574 -2234 291 294 54 29 chr17 13423522 13423664 -76080889 + MER5A DNA MER1_type 27 172 -6 247 351 18 18 chr17 13423669 13423780 -76080773 - MIR3 SINE MIR -44 164 54 224 240 93 0 chr17 13424733 13424808 -76079745 + MIR SINE MIR 142 223 -39 2030 128 0 0 chr17 13426194 13426552 -76078001 + AluSx SINE Alu 1 358 0 542 280 76 15 chr17 13427485 13427749 -76076804 + L1ME LINE L1 5510 5789 -332 207 100 0 0 chr17 13427749 13427779 -76076774 + (A)n Simple_repeat Simple_repeat 1 30 0 1904 185 40 8 chr17 13427977 13428329 -76076224 - MLT1A1 LTR MaLR -2 363 1 2065 126 90 0 chr17 13428558 13428914 -76075639 - L1MB3 LINE L1 0 6183 5796 234 0 0 0 chr17 13428915 13428941 -76075612 + (TTG)n Simple_repeat Simple_repeat 2 27 0 553 92 0 4 chr17 13428943 13429144 -76075409 - AluSc SINE Alu -31 278 1 1919 186 14 0 chr17 13429144 13429493 -76075060 - L1MB3 LINE L1 -386 5797 5444 225 0 0 0 chr17 13430202 13430227 -76074326 + (TA)n Simple_repeat Simple_repeat 1 25 0 2248 76 38 3 chr17 13430227 13430518 -76074035 - AluY SINE Alu -10 301 1 289 289 107 0 chr17 13431324 13431445 -76073108 + L2 LINE L2 3179 3312 -1 2745 39 0 0 chr17 13431597 13431908 -76072645 - AluY SINE Alu 0 311 1 2042 119 7 0 chr17 13432004 13432290 -76072263 - AluSx SINE Alu -24 288 1 197 333 42 28 chr17 13432357 13432501 -76072052 + L2 LINE L2 2226 2371 -943 2294 95 3 19 chr17 13432760 13433075 -76071478 - AluSg SINE Alu 0 310 1 2401 66 0 13 chr17 13433266 13433568 -76070985 - AluY SINE Alu -1 310 13 3700 242 83 92 chr17 13433811 13434030 -76070523 - L1ME LINE L1 -2669 3411 3191 1917 105 0 0 chr17 13434030 13434309 -76070244 + AluSx SINE Alu 35 313 0 3700 242 83 92 chr17 13434309 13437098 -76067455 - L1ME LINE L1 -2889 3191 494 21 36 0 0 chr17 13437218 13437246 -76067307 + AT_rich Low_complexity Low_complexity 1 28 0 732 263 45 31 chr17 13437423 13437647 -76066906 - MIR SINE MIR -1 261 35 241 325 72 12 chr17 13438099 13438182 -76066371 - L3b LINE CR1 -7 1576 1489 214 301 12 48 chr17 13440150 13440233 -76064320 - L2 LINE L2 -8 3264 3185 2238 70 0 36 chr17 13440290 13440618 -76063935 + AluY SINE Alu 1 311 0 198 209 0 0 chr17 13440814 13440857 -76063696 + (TA)n Simple_repeat Simple_repeat 1 43 0 2320 79 7 0 chr17 13441265 13441557 -76062996 - AluY SINE Alu -17 294 1 210 303 30 0 chr17 13441673 13441739 -76062814 - MIR3 SINE MIR -134 74 7 192 368 132 0 chr17 13442854 13442960 -76061593 - L2 LINE L2 -9 3263 3144 21 0 0 0 chr17 13444047 13444068 -76060485 + AT_rich Low_complexity Low_complexity 1 21 0 248 294 55 46 chr17 13444124 13444233 -76060320 - MIR SINE MIR -118 144 35 602 177 53 0 chr17 13444662 13444775 -76059778 - MER5A DNA MER1_type 0 189 71 808 92 0 0 chr17 13444780 13444889 -76059664 - AluY SINE Alu -2 309 201 * 1154 86 0 0 chr17 13444888 13445027 -76059526 - AluSg1 SINE Alu -170 139 1 303 224 45 0 chr17 13445028 13445095 -76059458 - MER5A DNA MER1_type -114 75 6 351 0 0 0 chr17 13447190 13447229 -76057324 + (CA)n Simple_repeat Simple_repeat 1 39 0 359 294 49 25 chr17 13447705 13447868 -76056685 + MIR3 SINE MIR 42 208 0 1915 142 22 38 chr17 13449565 13449882 -76054671 + AluJb SINE Alu 1 312 0 265 244 163 0 chr17 13450473 13450559 -76053994 + MIR SINE MIR 13 113 -95 339 293 97 63 chr17 13450965 13451296 -76053257 - L2 LINE L2 0 3272 2931 2421 93 0 3 chr17 13451758 13452071 -76052482 + AluSx SINE Alu 1 312 0 966 246 69 4 chr17 13452139 13452399 -76052154 + L1ME LINE L1 5519 5795 -326 1705 224 50 87 chr17 13452406 13452437 -76052116 + LTR9 LTR ERV1 1 32 -580 2489 50 0 47 chr17 13452437 13452755 -76051798 + AluSx SINE Alu 1 303 -9 1705 224 50 87 chr17 13452755 13453358 -76051195 + LTR9 LTR ERV1 32 612 0 235 307 50 10 chr17 13453358 13453459 -76051094 + L1ME LINE L1 5799 5903 -218 2589 53 0 3 chr17 13453606 13453910 -76050643 + AluY SINE Alu 1 303 -8 185 191 0 64 chr17 13455326 13455373 -76049180 - L2 LINE L2 -11 3261 3218 21 0 0 0 chr17 13457091 13457112 -76047441 + AT_rich Low_complexity Low_complexity 1 21 0 334 316 76 33 chr17 13457355 13457630 -76046923 - L1M4 LINE L1 -924 5222 4936 288 269 61 35 chr17 13457749 13457946 -76046607 - L1M4 LINE L1 -1501 4645 4444 24 85 0 0 chr17 13458156 13458215 -76046338 + AT_rich Low_complexity Low_complexity 1 59 0 257 173 58 40 chr17 13458235 13458456 -76046097 + (TA)n Simple_repeat Simple_repeat 1 224 0 215 139 14 42 chr17 13458520 13458592 -76045961 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 286 291 164 8 chr17 13458687 13458931 -76045622 - L1M4 LINE L1 -2150 3996 3715 315 258 115 60 chr17 13458931 13459082 -76045471 - MLT1J2 LTR MaLR -2 448 307 890 203 156 0 chr17 13459082 13459274 -76045279 - MER58A DNA MER1_type -2 222 1 315 258 115 60 chr17 13459274 13459420 -76045133 - MLT1J2 LTR MaLR -143 307 101 2350 99 3 0 chr17 13461342 13461645 -76042908 - AluSp SINE Alu -9 304 1 1837 83 25 8 chr17 13462448 13462689 -76041864 - AluSg SINE Alu -18 292 48 1426 164 0 0 chr17 13462812 13463032 -76041521 + AluJo SINE Alu 82 301 -11 2207 101 13 7 chr17 13463032 13463330 -76041223 + AluSq SINE Alu 1 300 -13 713 292 33 21 chr17 13464397 13464637 -76039916 - MIR SINE MIR 0 262 20 501 307 23 28 chr17 13465431 13465607 -76038946 - L3 LINE CR1 -405 1172 998 2276 109 0 0 chr17 13465895 13466189 -76038364 + AluY SINE Alu 1 294 -17 2291 113 7 0 chr17 13466452 13466762 -76037791 + AluSx SINE Alu 1 312 0 2426 89 0 0 chr17 13467371 13467675 -76036878 - AluSg SINE Alu -6 304 1 289 289 18 35 chr17 13469462 13469576 -76034977 - MIR SINE MIR -98 164 53 2377 96 0 0 chr17 13469839 13470142 -76034411 + AluSq SINE Alu 1 303 -10 216 333 56 21 chr17 13470175 13470319 -76034234 - MIR SINE MIR -16 246 98 320 299 6 0 chr17 13471314 13471491 -76033062 + (CA)n Simple_repeat Simple_repeat 1 178 0 456 244 8 17 chr17 13471702 13471821 -76032732 - MER94 DNA DNA -6 128 11 375 235 0 0 chr17 13471821 13471919 -76032634 + (TA)n Simple_repeat Simple_repeat 2 99 0 3238 84 7 28 chr17 13472725 13472792 -76031761 - L1PB2 LINE L1 -2 6149 6082 2365 100 0 0 chr17 13472792 13473101 -76031452 - AluY SINE Alu -2 309 1 3238 84 7 28 chr17 13473101 13473497 -76031056 - L1PB2 LINE L1 -69 6082 5696 2313 104 3 0 chr17 13473607 13473904 -76030649 - AluSp SINE Alu -15 298 1 2315 83 0 7 chr17 13474296 13474597 -76029956 + AluSx SINE Alu 5 303 -9 2248 98 0 3 chr17 13475443 13475738 -76028815 - AluSx SINE Alu -18 294 1 212 278 0 0 chr17 13475916 13475970 -76028583 - MIR SINE MIR -111 151 98 2381 89 0 19 chr17 13476350 13476665 -76027888 - AluSq SINE Alu -4 309 1 186 43 0 0 chr17 13477241 13477264 -76027289 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1723 182 15 12 chr17 13477503 13477832 -76026721 - MER44D DNA MER2_type -8 601 2 2441 66 3 20 chr17 13478046 13478375 -76026178 - AluSp SINE Alu 0 313 1 670 214 96 45 chr17 13479110 13479288 -76025265 - MSTD LTR MaLR 0 396 210 2336 100 3 0 chr17 13479594 13479894 -76024659 - AluSx SINE Alu -11 301 1 25 0 0 0 chr17 13479900 13479925 -76024628 + AT_rich Low_complexity Low_complexity 1 25 0 184 366 87 37 chr17 13479955 13480116 -76024437 - MIR SINE MIR -74 188 20 887 184 40 67 chr17 13480699 13480750 -76023803 + L1MC5 LINE L1 7535 7586 -375 2259 111 7 0 chr17 13480750 13481057 -76023496 + AluSc SINE Alu 1 309 0 887 184 40 67 chr17 13481057 13481407 -76023146 + L1MC5 LINE L1 7586 7925 -36 24 32 0 0 chr17 13481994 13482025 -76022528 + AT_rich Low_complexity Low_complexity 1 31 0 2219 98 3 3 chr17 13482113 13482399 -76022154 + AluSx SINE Alu 1 286 -26 362 175 12 0 chr17 13482401 13482481 -76022072 + (TA)n Simple_repeat Simple_repeat 1 81 0 253 311 0 0 chr17 13482495 13482585 -76021968 + L1MC4 LINE L1 6614 6703 -1339 * 264 255 0 43 chr17 13482513 13482607 -76021946 - L1MC4 LINE L1 -1339 6703 6614 2227 44 44 0 chr17 13482709 13483003 -76021550 - AluY SINE Alu 0 306 1 557 144 31 0 chr17 13483133 13483230 -76021323 - MER5A DNA MER1_type -80 109 10 2359 89 0 0 chr17 13483273 13483564 -76020989 + AluSx SINE Alu 1 291 -21 420 270 51 71 chr17 13484078 13484389 -76020164 - L1ME4a LINE L1 -110 6011 5707 529 238 122 6 chr17 13484450 13484614 -76019939 - MIR SINE MIR -28 234 52 412 208 257 0 chr17 13484702 13484846 -76019707 + MER5A DNA MER1_type 3 183 -6 206 222 16 32 chr17 13484996 13485059 -76019494 + MIR3 SINE MIR 141 202 -6 1127 232 0 0 chr17 13486398 13486622 -76017931 - MER58A DNA MER1_type 0 224 1 725 311 101 16 chr17 13486739 13486928 -76017625 - L2 LINE L2 -14 3299 3127 285 29 0 0 chr17 13486928 13486962 -76017591 + (TG)n Simple_repeat Simple_repeat 2 35 0 725 311 101 16 chr17 13486962 13486982 -76017571 - L2 LINE L2 -186 3127 3110 2378 77 3 0 chr17 13486982 13487268 -76017285 - AluSg SINE Alu -23 287 1 725 311 101 16 chr17 13487268 13487482 -76017071 - L2 LINE L2 -203 3110 2839 366 271 66 24 chr17 13487646 13487812 -76016741 - MIR SINE MIR -6 256 84 1317 120 5 5 chr17 13488195 13488379 -76016174 + AluSg SINE Alu 1 184 -126 644 98 0 0 chr17 13488379 13488461 -76016092 + AluSg SINE Alu 53 134 -176 2164 118 10 0 chr17 13488461 13488767 -76015786 + AluSg SINE Alu 1 309 -1 746 93 0 0 chr17 13489482 13489589 -76014964 + AluSg/x SINE Alu 201 307 -3 2257 105 10 0 chr17 13490354 13490660 -76013893 - AluSx SINE Alu -3 309 1 195 228 217 43 chr17 13491286 13491378 -76013175 + MIR SINE MIR 44 151 -111 2308 119 3 0 chr17 13491633 13491943 -76012610 + AluSq SINE Alu 1 311 -2 265 337 61 17 chr17 13492141 13492322 -76012231 + MER102a DNA MER1_type 127 315 -15 2696 172 12 10 chr17 13492909 13493404 -76011149 + L1MB3 LINE L1 5688 6183 0 190 357 70 6 chr17 13494094 13494251 -76010302 - L2 LINE L2 -1089 2225 2059 232 343 0 0 chr17 13494278 13494348 -76010205 - L2 LINE L2 -85 3228 3159 * 751 319 202 30 chr17 13494343 13494454 -76010099 - L2 LINE L2 -1789 1525 1434 429 20 0 0 chr17 13494454 13494504 -76010049 + (CA)n Simple_repeat Simple_repeat 1 50 0 2372 63 0 3 chr17 13494504 13494789 -76009764 - AluSc SINE Alu -25 284 1 751 319 202 30 chr17 13494789 13495858 -76008695 - L2 LINE L2 -1879 1435 141 271 275 25 0 chr17 13498385 13498465 -76006088 + (TA)n Simple_repeat Simple_repeat 2 83 0 380 217 0 29 chr17 13499818 13499956 -76004597 + GA-rich Low_complexity Low_complexity 3 136 0 38 75 0 0 chr17 13501755 13501835 -76002718 + AT_rich Low_complexity Low_complexity 1 80 0 688 274 26 22 chr17 13501847 13502077 -76002476 - MIR SINE MIR -31 231 1 828 283 108 40 chr17 13502433 13502832 -76001721 - MLT1K LTR MaLR -153 435 10 234 326 18 80 chr17 13502981 13503205 -76001348 - L2 LINE L2 -212 3060 2851 1412 160 54 164 chr17 13503206 13503236 -76001317 - MLT1B LTR MaLR -11 379 347 2111 92 64 0 chr17 13503236 13503518 -76001035 + AluSg SINE Alu 1 300 -10 1412 160 54 164 chr17 13503518 13503785 -76000768 - MLT1B LTR MaLR -43 347 139 2225 106 3 0 chr17 13503785 13504106 -76000447 - AluSp SINE Alu 0 322 1 1412 160 54 164 chr17 13504106 13504232 -76000321 - MLT1B LTR MaLR -251 139 1 276 365 27 20 chr17 13504243 13504391 -76000162 - L2 LINE L2 -492 2822 2674 2253 106 0 0 chr17 13504536 13504828 -75999725 + AluSx SINE Alu 1 292 -20 395 322 180 35 chr17 13504894 13506325 -75998228 - L2 LINE L2 -733 2581 943 1575 85 0 5 chr17 13506517 13506717 -75997836 + AluSc SINE Alu 100 298 -11 4492 125 11 0 chr17 13506722 13507388 -75997165 + L1PA16 LINE L1 5485 6157 -9 2296 99 3 0 chr17 13507626 13507918 -75996635 + AluSp SINE Alu 1 293 -20 316 295 96 58 chr17 13508972 13509084 -75995469 - L1M4 LINE L1 -2920 3226 3120 2327 111 0 0 chr17 13509084 13509390 -75995163 - AluSp SINE Alu -7 306 1 316 295 96 58 chr17 13509390 13509640 -75994913 - L1M4 LINE L1 -3026 3120 2850 2223 243 27 91 chr17 13509675 13510603 -75993950 - L1ME3A LINE L1 -22 6148 5280 2188 116 0 13 chr17 13510604 13510915 -75993638 - AluSx SINE Alu -5 307 1 372 200 0 0 chr17 13510936 13511016 -75993537 + (CA)n Simple_repeat Simple_repeat 2 81 0 601 0 56 0 chr17 13511016 13511105 -75993448 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 1764 123 46 39 chr17 13511105 13511389 -75993164 - AluJb SINE Alu -22 290 5 511 212 37 69 chr17 13511450 13511483 -75993070 - L1ME3A LINE L1 -908 5238 5205 1642 167 9 49 chr17 13511483 13511807 -75992746 - AluJb SINE Alu -1 311 1 511 212 37 69 chr17 13511807 13511990 -75992563 - L1ME3A LINE L1 -941 5205 5029 237 324 45 0 chr17 13512024 13512135 -75992418 - HAL1 LINE L1 -815 1692 1577 1494 113 137 16 chr17 13512412 13512698 -75991855 - AluSg1 SINE Alu 0 316 1 254 280 42 49 chr17 13512922 13513065 -75991488 - HAL1 LINE L1 -1398 1109 968 348 290 140 21 chr17 13513172 13513365 -75991188 + MIR SINE MIR 19 234 -28 2262 114 3 0 chr17 13513923 13514220 -75990333 + AluSq SINE Alu 1 298 -15 2475 75 0 3 chr17 13514338 13514643 -75989910 - AluY SINE Alu -7 304 1 712 312 51 26 chr17 13514647 13515102 -75989451 + L1ME LINE L1 5272 5739 -382 301 342 26 33 chr17 13515272 13515324 -75989229 - L1M4 LINE L1 -2373 3773 3722 2165 110 7 7 chr17 13515324 13515625 -75988928 - AluSx SINE Alu -11 301 1 301 342 26 33 chr17 13515625 13515844 -75988709 - L1M4 LINE L1 -2424 3722 3504 2324 105 0 3 chr17 13515929 13516242 -75988311 + AluSx SINE Alu 1 312 0 477 280 50 20 chr17 13516573 13516773 -75987780 - MLT1H LTR MaLR -287 262 57 2209 138 3 34 chr17 13517198 13517462 -75987091 + MER7A DNA MER2_type 1 251 -2787 2370 98 0 0 chr17 13517462 13517759 -75986794 - AluSx SINE Alu -15 297 1 2209 138 3 34 chr17 13517759 13517850 -75986703 + MER7A DNA MER2_type 251 343 -3 830 214 96 5 chr17 13517877 13518064 -75986489 + MER3 DNA MER1_type 1 204 -5 254 295 0 13 chr17 13518201 13518279 -75986274 - MLT1I LTR MaLR -275 134 58 227 246 31 15 chr17 13518310 13518375 -75986178 + CT-rich Low_complexity Low_complexity 3 68 0 242 215 200 0 chr17 13518858 13518923 -75985630 - MLT1I LTR MaLR 0 409 332 356 273 15 45 chr17 13518977 13519109 -75985444 - MLT1I LTR MaLR -197 212 85 992 182 0 76 chr17 13519657 13519801 -75984752 + MER3 DNA MER1_type 2 125 -84 4766 61 30 71 chr17 13519801 13520475 -75984078 - L1PA8 LINE L1 -2 6170 5525 992 182 0 76 chr17 13520475 13520555 -75983998 + MER3 DNA MER1_type 125 209 0 246 286 0 0 chr17 13521125 13521195 -75983358 - MIR SINE MIR -123 139 70 2397 90 0 0 chr17 13521329 13521639 -75982914 - AluSg SINE Alu 0 310 1 424 353 74 23 chr17 13524770 13525028 -75979525 + L2 LINE L2 2686 2956 -358 299 330 142 28 chr17 13525913 13526131 -75978422 + MIR SINE MIR 15 257 -5 376 313 30 0 chr17 13526193 13526292 -75978261 - L2 LINE L2 -20 3293 3192 2425 74 0 0 chr17 13526292 13526591 -75977962 + AluSx SINE Alu 1 299 -13 219 288 41 41 chr17 13526631 13526704 -75977849 + L2 LINE L2 3107 3179 -93 711 253 134 17 chr17 13528857 13529003 -75975550 - L1ME4a LINE L1 -6 6115 5987 279 0 0 0 chr17 13529003 13529034 -75975519 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 711 253 134 17 chr17 13529034 13529179 -75975374 - L1ME4a LINE L1 -134 5987 5790 349 232 0 53 chr17 13529213 13529308 -75975245 - L1ME4a LINE L1 -449 5672 5583 553 174 11 11 chr17 13529336 13529428 -75975125 - FRAM SINE Alu -84 92 1 2315 90 0 29 chr17 13529460 13529771 -75974782 - AluY SINE Alu -9 302 1 306 260 87 91 chr17 13530655 13531140 -75973413 - L1ME4a LINE L1 -1587 4559 4077 183 323 240 0 chr17 13531320 13531416 -75973137 - L2 LINE L2 -4 3309 3191 272 263 207 34 chr17 13531433 13531790 -75972763 - L1ME4a LINE L1 -2301 3845 3427 518 266 39 98 chr17 13532111 13532416 -75972137 - MLT1I LTR MaLR -7 402 116 1761 105 4 0 chr17 13532566 13532795 -75971758 - AluSq SINE Alu -83 230 1 423 294 9 0 chr17 13532880 13532989 -75971564 + MIR SINE MIR 151 260 -2 285 200 14 14 chr17 13533222 13533292 -75971261 - MLT1I LTR MaLR 0 409 340 255 262 60 48 chr17 13533369 13533453 -75971100 - MLT1I LTR MaLR -197 212 128 300 325 16 13 chr17 13533521 13533683 -75970870 - MIR SINE MIR -34 228 68 275 341 60 33 chr17 13534215 13534397 -75970156 - MIR SINE MIR -74 188 2 397 259 176 46 chr17 13534421 13534745 -75969808 + L1ME4a LINE L1 5734 6099 -22 344 176 15 15 chr17 13535089 13535157 -75969396 - LTR67 LTR ERVL -3 554 487 2033 146 0 19 chr17 13535616 13535794 -75968759 - AluSx SINE Alu -3 309 129 387 0 0 0 chr17 13535794 13535837 -75968716 + (TA)n Simple_repeat Simple_repeat 2 44 0 2412 73 10 7 chr17 13535837 13536138 -75968415 - AluSx SINE Alu -10 302 1 2033 146 0 19 chr17 13536138 13536273 -75968280 - AluSx SINE Alu -181 131 1 608 211 0 9 chr17 13536382 13536491 -75968062 - FRAM SINE Alu -30 146 39 396 157 56 22 chr17 13536701 13536790 -75967763 - MER103 DNA DNA -23 143 52 385 267 120 42 chr17 13536800 13536991 -75967562 - MLT1L LTR MaLR 0 615 410 370 274 28 78 chr17 13537221 13537400 -75967153 - MLT1L LTR MaLR -438 177 8 191 211 0 105 chr17 13537699 13537756 -75966797 + L2 LINE L2 3214 3264 -8 187 287 108 39 chr17 13538086 13538215 -75966338 + L2 LINE L2 3102 3239 -33 1230 253 119 13 chr17 13538572 13538951 -75965602 - LTR16A LTR ERVL -6 444 26 289 228 193 18 chr17 13539282 13539396 -75965157 + MER94 DNA DNA 1 134 0 570 301 7 13 chr17 13539485 13539638 -75964915 + MIR SINE MIR 15 166 -96 1782 182 21 52 chr17 13539638 13540023 -75964530 - MER93b LTR ERV1 0 373 1 2833 115 0 6 chr17 13540236 13540602 -75963951 - THE1B LTR MaLR 0 364 1 10973 112 32 34 chr17 13540602 13542186 -75962367 - THE1B-int LTR MaLR 0 1580 1 2557 103 54 14 chr17 13542186 13542536 -75962017 - THE1B LTR MaLR 0 364 1 859 194 11 12 chr17 13543049 13543220 -75961333 - MLT1C LTR MaLR 0 507 307 1070 270 67 47 chr17 13543227 13543657 -75960896 + MER21B LTR ERV1 19 457 -406 2726 127 39 7 chr17 13543662 13543897 -75960656 - Tigger2 DNA MER2_type 0 2718 2461 2562 57 0 16 chr17 13543897 13544213 -75960340 + AluY SINE Alu 1 311 0 2726 127 39 7 chr17 13544213 13544409 -75960144 - Tigger2 DNA MER2_type -257 2461 2273 473 159 0 0 chr17 13544398 13544467 -75960086 - Tigger2 DNA MER2_type -2649 69 1 * 394 246 55 0 chr17 13544473 13544583 -75959970 + MER21B LTR ERV1 624 739 -124 916 244 68 24 chr17 13544604 13544899 -75959654 - MLT1C LTR MaLR -156 311 4 303 247 68 89 chr17 13544921 13545067 -75959486 - L2 LINE L2 -6 3266 3124 221 329 0 0 chr17 13546343 13546419 -75958134 + (TA)n Simple_repeat Simple_repeat 2 77 0 2532 66 0 0 chr17 13547102 13547407 -75957146 - AluSx SINE Alu -7 305 1 236 241 89 36 chr17 13548430 13548542 -75956011 - MIR SINE MIR -117 145 28 290 234 113 32 chr17 13549328 13549452 -75955101 + L1M4 LINE L1 4162 4295 -1851 7780 242 77 23 chr17 13549458 13550151 -75954402 + L1M4 LINE L1 2314 2968 -3178 740 105 30 75 chr17 13550151 13550284 -75954269 + L1MA3 LINE L1 6179 6305 0 7780 242 77 23 chr17 13550284 13552041 -75952512 + L1M4 LINE L1 2968 4896 -1250 2211 241 78 20 chr17 13552042 13553107 -75951446 - L1ME2 LINE L1 -236 5928 4794 455 113 0 0 chr17 13553110 13553181 -75951372 - L1MA5A LINE L1 -1 6296 6226 21 36 0 0 chr17 13553185 13553213 -75951340 + AT_rich Low_complexity Low_complexity 1 28 0 187 313 156 21 chr17 13553389 13553485 -75951068 - L2 LINE L2 -28 3244 3136 1134 236 164 0 chr17 13554975 13555267 -75949286 - MER58B DNA MER1_type -1 340 1 1070 321 132 43 chr17 13556050 13557084 -75947469 + L2 LINE L2 1129 2253 -1061 654 254 36 6 chr17 13557141 13557306 -75947247 - L2 LINE L2 -572 2742 2573 398 315 55 65 chr17 13557452 13557914 -75946639 + L2 LINE L2 2649 3114 -199 1922 142 3 7 chr17 13557914 13558203 -75946350 - AluJb SINE Alu -24 288 1 398 315 55 65 chr17 13558203 13558238 -75946315 + L2 LINE L2 3114 3148 -165 2139 144 76 30 chr17 13558238 13558276 -75946277 - MLT2D LTR ERVL 0 414 379 246 32 0 0 chr17 13558276 13558307 -75946246 + (TG)n Simple_repeat Simple_repeat 1 31 0 2139 144 76 30 chr17 13558307 13558664 -75945889 - MLT2D LTR ERVL -35 379 1 398 315 55 65 chr17 13558664 13558759 -75945794 + L2 LINE L2 3148 3309 -4 1393 91 17 65 chr17 13558931 13559163 -75945390 - L1PA13 LINE L1 -4 6159 5939 237 269 69 35 chr17 13560240 13560385 -75944168 + L1M4 LINE L1 3671 3820 -2326 1828 104 40 0 chr17 13560668 13560917 -75943636 + AluSx SINE Alu 46 304 -8 272 173 49 62 chr17 13560953 13561034 -75943519 + MER116 DNA Mariner 1 80 0 648 282 118 66 chr17 13561034 13561496 -75943057 - L1ME2 LINE L1 -1917 4229 3722 2427 75 0 28 chr17 13561496 13561816 -75942737 - AluY SINE Alu 0 311 1 648 282 118 66 chr17 13561816 13562006 -75942547 - L1ME2 LINE L1 -2424 3722 3543 701 304 140 22 chr17 13562475 13562876 -75941677 + L2 LINE L2 2865 3312 -1 405 296 22 37 chr17 13563443 13563578 -75940975 + MIR3 SINE MIR 50 182 -26 413 270 158 23 chr17 13563956 13564171 -75940382 - MIR SINE MIR -16 246 3 2598 197 71 47 chr17 13564208 13564853 -75939700 - MER67B LTR ERV1 0 661 1 476 141 0 59 chr17 13564853 13564893 -75939660 - MER67A LTR ERV1 -463 80 46 3859 162 5 70 chr17 13564893 13565632 -75938921 - LTR8 LTR ERV1 0 691 1 476 141 0 59 chr17 13565632 13565676 -75938877 - MER67A LTR ERV1 -497 46 1 3044 149 39 16 chr17 13566433 13567019 -75937534 - MER4B LTR ERV1 0 779 3 550 111 0 81 chr17 13567309 13567408 -75937145 + AluJ/FRAM SINE Alu 222 312 0 230 170 0 21 chr17 13567535 13567582 -75936971 - L2 LINE L2 -78 3235 3190 21 0 0 0 chr17 13568484 13568505 -75936048 + AT_rich Low_complexity Low_complexity 1 21 0 3506 121 22 15 chr17 13568505 13569043 -75935510 - L1MB2 LINE L1 -7 6164 5623 2735 217 39 24 chr17 13569147 13569232 -75935321 + L1M4 LINE L1 2314 2396 -3750 2259 104 0 29 chr17 13569232 13569548 -75935005 + AluSx SINE Alu 1 307 -5 2735 217 39 24 chr17 13569548 13570176 -75934377 + L1M4 LINE L1 2396 3038 -3108 784 114 0 0 chr17 13570176 13570281 -75934272 + L1MA3 LINE L1 6194 6298 -7 390 318 62 47 chr17 13570320 13570594 -75933959 + L3 LINE CR1 223 500 -1077 1927 119 0 107 chr17 13571537 13571873 -75932680 - AluSq SINE Alu -3 300 1 23 0 0 0 chr17 13573024 13573047 -75931506 + AT_rich Low_complexity Low_complexity 1 23 0 220 276 52 0 chr17 13573995 13574053 -75930500 + MER91 DNA MER1_type 127 187 -3 1518 166 72 8 chr17 13574183 13574448 -75930105 + AluSx SINE Alu 1 282 -30 423 52 0 0 chr17 13574461 13574519 -75930034 + (CA)n Simple_repeat Simple_repeat 1 58 0 395 270 87 0 chr17 13574536 13574651 -75929902 + MIR SINE MIR 26 150 -112 304 203 14 14 chr17 13574652 13574721 -75929832 - MER69 DNA AcHobo -2 2524 2456 253 245 326 0 chr17 13574921 13575019 -75929534 - MER5B DNA MER1_type -3 175 46 1692 143 7 22 chr17 13575039 13575311 -75929242 + AluJb SINE Alu 45 312 0 823 181 163 0 chr17 13575383 13575543 -75929010 - MER5A DNA MER1_type -2 187 2 1788 249 45 79 chr17 13576237 13576518 -75928035 - L1ME LINE L1 -5242 828 539 2146 125 3 3 chr17 13576518 13576823 -75927730 - AluSx SINE Alu -7 305 1 1788 249 45 79 chr17 13576823 13577041 -75927512 - L1ME LINE L1 -5531 539 315 2006 208 26 0 chr17 13577041 13577425 -75927128 - MSTD LTR MaLR -2 394 1 1788 249 45 79 chr17 13577425 13577776 -75926777 - L1ME LINE L1 -5755 315 6 262 344 40 55 chr17 13577950 13578094 -75926459 + L2 LINE L2 3038 3178 -135 2445 89 0 0 chr17 13578094 13578397 -75926156 + AluSc SINE Alu 1 303 -6 262 344 40 55 chr17 13578397 13578505 -75926048 + L2 LINE L2 3178 3286 -27 2400 31 41 14 chr17 13580379 13580671 -75923882 - AluY SINE Alu -11 300 1 187 184 61 0 chr17 13581525 13581574 -75922979 + L2 LINE L2 3182 3233 -80 2408 77 3 3 chr17 13581632 13581931 -75922622 + AluSp SINE Alu 1 299 -14 234 0 0 0 chr17 13582435 13582461 -75922092 + (T)n Simple_repeat Simple_repeat 1 26 0 297 324 35 35 chr17 13582987 13583132 -75921421 - MIR3 SINE MIR -7 201 57 193 272 39 107 chr17 13583470 13583573 -75920980 + L2 LINE L2 15 110 -3204 495 224 65 0 chr17 13583612 13583719 -75920834 + L2 LINE L2 3200 3313 0 231 312 142 7 chr17 13583804 13583945 -75920608 + MIR3 SINE MIR 45 204 -4 1917 78 127 4 chr17 13584333 13584601 -75919952 - AluSp SINE Alu -2 301 1 440 284 31 67 chr17 13585210 13585415 -75919138 - L1M4 LINE L1 -2841 3305 3109 2363 79 7 0 chr17 13585415 13585707 -75918846 - AluY SINE Alu -17 294 1 440 284 31 67 chr17 13585707 13585755 -75918798 - L1M4 LINE L1 -3037 3109 3061 1168 138 58 26 chr17 13585828 13586149 -75918404 - MLT2A2 LTR ERVL -1 452 205 304 370 86 19 chr17 13587276 13587533 -75917020 + L1MC4a LINE L1 5660 5933 -1875 2508 81 3 0 chr17 13587543 13587852 -75916701 + AluSp SINE Alu 1 310 -3 428 121 15 15 chr17 13588042 13588108 -75916445 + FLAM SINE Alu 55 120 -23 207 100 0 0 chr17 13588111 13588141 -75916412 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 238 193 70 0 chr17 13588165 13588222 -75916331 - L1 LINE L1 -885 5261 5201 600 281 115 5 chr17 13589481 13589698 -75914855 + MIR SINE MIR 5 245 -17 1031 209 94 94 chr17 13590099 13590473 -75914080 - MSTD LTR MaLR -4 392 19 432 0 0 0 chr17 13590632 13590680 -75913873 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 180 250 0 135 chr17 13591256 13591352 -75913201 + L3 LINE CR1 1472 1554 -23 2021 182 70 22 chr17 13591472 13591604 -75912949 + MLT1C LTR MaLR 3 127 -340 2372 117 45 28 chr17 13591604 13591962 -75912591 - THE1B LTR MaLR 0 364 1 2021 182 70 22 chr17 13591962 13592273 -75912280 + MLT1C LTR MaLR 127 467 0 1226 254 61 80 chr17 13592547 13593086 -75911467 - MER74A LTR ERVL -29 529 1 233 158 0 26 chr17 13593383 13593421 -75911132 + Alu SINE Alu 85 121 -181 536 336 137 0 chr17 13593489 13593700 -75910853 + MLT1K LTR MaLR 3 242 -346 2036 139 20 0 chr17 13593720 13594022 -75910531 - AluSx SINE Alu -4 308 1 821 156 7 15 chr17 13594022 13594157 -75910396 - AluSq/x SINE Alu -178 135 2 2194 164 28 89 chr17 13594162 13594511 -75910042 - MLT1D LTR MaLR 0 505 199 2155 110 21 0 chr17 13594511 13594801 -75909752 - AluSx SINE Alu -16 296 1 2194 164 28 89 chr17 13594801 13594989 -75909564 - MLT1D LTR MaLR -306 199 1 473 297 171 24 chr17 13594989 13595235 -75909318 + MLT1K LTR MaLR 237 518 -70 187 220 0 60 chr17 13595439 13595489 -75909064 + MIR3 SINE MIR 108 154 -54 1771 133 68 31 chr17 13595579 13595872 -75908681 + AluJb SINE Alu 1 304 -8 901 140 0 22 chr17 13595872 13596008 -75908545 + FLAM_C SINE Alu 1 133 0 38 0 0 0 chr17 13596008 13596046 -75908507 + AT_rich Low_complexity Low_complexity 1 38 0 283 385 44 7 chr17 13596046 13596181 -75908372 - MIR3 SINE MIR -39 169 30 23 0 0 0 chr17 13596353 13596376 -75908177 + AT_rich Low_complexity Low_complexity 1 23 0 995 244 160 6 chr17 13596607 13597046 -75907507 - MLT1G1 LTR MaLR -8 587 1 302 323 97 26 chr17 13597986 13598181 -75906372 + HAL1 LINE L1 1391 1599 -908 2519 69 3 0 chr17 13598374 13598678 -75905875 + AluY SINE Alu 1 305 -6 928 224 126 85 chr17 13599377 13599917 -75904636 - MER34B LTR ERV1 -3 562 1 1961 176 29 13 chr17 13600910 13601291 -75903262 - MLT1B LTR MaLR -3 387 1 391 86 14 14 chr17 13601444 13601514 -75903039 + (TA)n Simple_repeat Simple_repeat 2 71 0 2305 89 3 10 chr17 13601514 13601817 -75902736 - AluSg SINE Alu -5 305 5 25 31 0 0 chr17 13601820 13601852 -75902701 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr17 13602293 13602319 -75902234 + AT_rich Low_complexity Low_complexity 1 26 0 1058 171 25 20 chr17 13602323 13602522 -75902031 - L1MB3 LINE L1 -12 6171 5972 225 243 208 7 chr17 13602593 13602737 -75901816 - L1ME4a LINE L1 -106 6015 5843 1770 164 34 10 chr17 13602915 13603208 -75901345 - AluJo SINE Alu -12 300 1 526 244 24 0 chr17 13603241 13603368 -75901185 - L1ME4a LINE L1 -513 5608 5479 441 276 55 62 chr17 13603379 13603669 -75900884 - HAL1 LINE L1 -10 2497 2210 352 252 0 37 chr17 13603774 13603881 -75900672 + T-rich Low_complexity Low_complexity 4 106 0 2839 116 7 30 chr17 13604060 13604200 -75900353 + MSTA LTR MaLR 1 143 -285 2305 142 131 8 chr17 13604200 13604581 -75899972 - MSTA LTR MaLR 0 428 1 2839 116 7 30 chr17 13604581 13604878 -75899675 + MSTA LTR MaLR 143 428 0 324 274 177 23 chr17 13605278 13605544 -75899009 - HAL1 LINE L1 -776 1731 1425 205 302 52 42 chr17 13606137 13606233 -75898320 + L2 LINE L2 2967 3063 -209 2178 115 0 19 chr17 13606482 13606841 -75897712 + AluSx SINE Alu 1 312 0 469 279 66 35 chr17 13606975 13607184 -75897369 - MLT1L LTR MaLR -202 309 112 2179 119 0 3 chr17 13607317 13607611 -75896942 + AluSq SINE Alu 3 295 -18 1036 168 40 6 chr17 13607940 13608113 -75896440 - MER5A DNA MER1_type 0 189 11 1812 159 13 10 chr17 13608179 13608481 -75896072 + AluJo SINE Alu 3 305 -7 2409 78 0 0 chr17 13608528 13608822 -75895731 + AluSq SINE Alu 1 294 -19 1311 247 93 45 chr17 13608833 13609348 -75895205 + MER74A LTR ERVL 19 558 0 2308 102 7 3 chr17 13609498 13609803 -75894750 + AluSc SINE Alu 1 306 -3 1810 51 0 0 chr17 13610414 13610628 -75893925 + AluY SINE Alu 80 293 -18 433 250 71 14 chr17 13610952 13611092 -75893461 + MER103 DNA DNA 18 165 -1 262 280 13 0 chr17 13611563 13611638 -75892915 + L3 LINE CR1 1482 1557 -20 4132 65 27 0 chr17 13611854 13612365 -75892188 - L1PB1 LINE L1 -2 6149 5625 22 35 0 0 chr17 13612492 13612521 -75892032 + AT_rich Low_complexity Low_complexity 1 29 0 231 208 0 0 chr17 13612529 13612577 -75891976 - LTR66 LTR ERVL -169 441 394 1141 161 95 0 chr17 13612624 13612835 -75891718 - Tigger2a DNA MER2_type -22 422 192 432 147 0 15 chr17 13612837 13612905 -75891648 - Tigger2a DNA MER2_type -334 100 34 516 322 68 39 chr17 13613313 13613980 -75890573 - L1ME3A LINE L1 -219 5951 5266 1107 264 117 81 chr17 13614120 13614551 -75890002 - L1ME3A LINE L1 -1082 5064 4650 1414 199 16 32 chr17 13614551 13614867 -75889686 - AluJo SINE Alu -1 311 1 1107 264 117 81 chr17 13614867 13616311 -75888242 - L1ME3A LINE L1 -1496 4650 3121 291 287 188 31 chr17 13616370 13617116 -75887437 - L1ME3A LINE L1 -3144 3002 2140 4133 235 85 29 chr17 13617396 13617760 -75886793 - L1ME1 LINE L1 0 6560 6218 2220 100 0 0 chr17 13617760 13618064 -75886489 - AluSg SINE Alu 0 305 2 4133 235 85 29 chr17 13618064 13618191 -75886362 - L1ME1 LINE L1 -342 6218 6099 252 0 0 0 chr17 13618191 13618219 -75886334 + (TG)n Simple_repeat Simple_repeat 2 29 0 4133 235 85 29 chr17 13618219 13618390 -75886163 - L1ME1 LINE L1 -461 6099 5939 249 57 0 0 chr17 13618390 13618425 -75886128 + (TG)n Simple_repeat Simple_repeat 2 36 0 4133 235 85 29 chr17 13618425 13620037 -75884516 - L1ME1 LINE L1 -621 5939 4153 186 103 0 0 chr17 13620087 13620116 -75884437 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1444 176 10 52 chr17 13620116 13620406 -75884147 - AluJb SINE Alu -34 278 1 4024 229 73 35 chr17 13620408 13622115 -75882438 - L1ME1 LINE L1 -2391 4149 2387 1497 201 134 9 chr17 13622115 13622458 -75882095 - MSTD LTR MaLR 0 396 11 6634 227 78 50 chr17 13622468 13624154 -75880399 - MSTD-int LTR MaLR 0 1735 3 1519 254 46 6 chr17 13624157 13624523 -75880030 - MSTD LTR MaLR -13 383 3 413 178 0 0 chr17 13624539 13624612 -75879941 - L1ME1 LINE L1 -4191 2349 2277 6574 205 85 66 chr17 13624615 13624665 -75879888 - L1ME1 LINE L1 -4475 2065 2017 2107 93 24 10 chr17 13624665 13624956 -75879597 - AluSx SINE Alu -17 295 1 6574 205 85 66 chr17 13624956 13626930 -75877623 - L1ME1 LINE L1 -4523 2017 1 252 188 0 0 chr17 13627073 13627142 -75877411 + (TG)n Simple_repeat Simple_repeat 2 70 0 282 95 0 0 chr17 13627152 13627194 -75877359 + (GA)n Simple_repeat Simple_repeat 2 43 0 950 118 0 0 chr17 13627890 13628026 -75876527 + AluSc SINE Alu 174 309 0 1257 55 0 0 chr17 13628267 13628432 -75876121 - L1PA5 LINE L1 -709 5445 5281 5913 50 3 13 chr17 13628436 13629140 -75875413 + L1PA5 LINE L1 5458 6154 0 180 0 0 0 chr17 13630577 13630597 -75873956 + (T)n Simple_repeat Simple_repeat 1 20 0 1940 185 143 17 chr17 13630863 13631333 -75873220 - MER74A LTR ERVL -27 531 3 305 274 0 0 chr17 13631458 13631531 -75873022 - MLT1L LTR MaLR -221 394 322 226 125 0 0 chr17 13631574 13631606 -75872947 - LTR67 LTR ERVL -418 139 108 2294 89 0 0 chr17 13631823 13632135 -75872418 - AluSc SINE Alu 0 312 1 2347 101 3 0 chr17 13632985 13633293 -75871260 - AluSg SINE Alu -1 309 1 422 326 130 47 chr17 13633455 13633780 -75870773 - L2 LINE L2 -6 3266 2969 2464 93 0 7 chr17 13633780 13634090 -75870463 - AluSq SINE Alu -5 308 1 422 326 130 47 chr17 13634090 13634487 -75870066 - L2 LINE L2 -303 2969 2466 234 350 21 14 chr17 13634512 13634655 -75869898 - L2 LINE L2 -1105 2209 2066 634 309 112 26 chr17 13634670 13635351 -75869202 + L2 LINE L2 2424 3165 -148 573 303 27 27 chr17 13635551 13635772 -75868781 + MIR SINE MIR 31 251 -11 482 0 17 0 chr17 13635950 13636008 -75868545 + (GA)n Simple_repeat Simple_repeat 1 59 0 414 0 0 0 chr17 13636007 13636053 -75868500 + (TG)n Simple_repeat Simple_repeat 2 47 0 * 21 0 0 0 chr17 13636451 13636472 -75868081 + AT_rich Low_complexity Low_complexity 1 21 0 1713 50 5 0 chr17 13636472 13636671 -75867882 - L1PB1 LINE L1 -4 6147 5948 2196 95 7 13 chr17 13636966 13637272 -75867281 - AluSc SINE Alu -5 304 1 285 279 17 78 chr17 13637399 13637578 -75866975 + L1MC4a LINE L1 5747 5914 -1894 2090 95 0 41 chr17 13637764 13638058 -75866495 - AluSg SINE Alu -8 302 21 1380 153 24 5 chr17 13638798 13639007 -75865546 - MER20 DNA MER1_type -3 216 4 1884 173 76 31 chr17 13639094 13639476 -75865077 - MER21B LTR ERV1 -53 810 412 1921 165 0 16 chr17 13639519 13639835 -75864718 + AluJo SINE Alu 1 311 -1 3342 191 78 21 chr17 13640211 13640968 -75863585 - L1MB5 LINE L1 -26 6148 5349 2325 92 0 25 chr17 13641054 13641371 -75863182 - AluSq SINE Alu -4 309 1 523 288 111 73 chr17 13641993 13642702 -75861851 + L1MEd LINE L1 915 1650 -4880 298 316 111 16 chr17 13642725 13642978 -75861575 + HAL1 LINE L1 1370 1646 -861 741 157 69 100 chr17 13643139 13643313 -75861240 - MER34B LTR ERV1 -19 546 381 2096 106 11 0 chr17 13643313 13643595 -75860958 - AluSx SINE Alu -10 302 18 741 157 69 100 chr17 13643595 13643681 -75860872 - MER34B LTR ERV1 -184 381 294 337 275 105 78 chr17 13643712 13644083 -75860470 + L1MEd LINE L1 2253 2633 -3907 4188 251 88 59 chr17 13644121 13646010 -75858543 + HAL1 LINE L1 11 1954 -553 24 0 0 0 chr17 13646014 13646038 -75858515 + AT_rich Low_complexity Low_complexity 1 24 0 543 230 251 15 chr17 13646164 13646490 -75858063 + HAL1 LINE L1 1971 2373 -134 522 119 0 0 chr17 13646498 13646565 -75857988 + AluS SINE Alu 1 67 -246 2138 127 0 3 chr17 13646565 13646857 -75857696 + AluSx SINE Alu 14 304 -8 299 279 165 15 chr17 13646954 13647397 -75857156 + L1MC4a LINE L1 5267 5546 -616 2343 68 0 17 chr17 13647399 13647695 -75856858 + AluSq SINE Alu 21 311 -2 1371 160 0 0 chr17 13647899 13648124 -75856429 - AluSg/x SINE Alu -6 306 82 244 209 58 70 chr17 13648189 13648275 -75856278 - L1M4 LINE L1 -1574 4572 4488 2295 103 0 3 chr17 13649251 13649551 -75855002 - AluSx SINE Alu -13 299 1 1323 142 83 9 chr17 13649755 13649973 -75854580 + MER46A DNA MER2_type 2 235 -1 697 215 85 60 chr17 13649987 13650008 -75854545 + MER3 DNA MER1_type 1 20 -189 1654 184 109 121 chr17 13650008 13650569 -75853984 - MLT2B3 LTR ERVL 0 554 1 697 215 85 60 chr17 13650569 13650747 -75853806 + MER3 DNA MER1_type 20 205 -4 1584 155 21 14 chr17 13651864 13652155 -75852398 + L1MA9 LINE L1 6009 6301 -11 2373 102 0 0 chr17 13652248 13652552 -75852001 - AluSx SINE Alu -8 304 1 730 281 128 40 chr17 13652785 13652961 -75851592 - L2 LINE L2 -5 3308 3149 2508 60 3 3 chr17 13652961 13653261 -75851292 + AluY SINE Alu 1 300 -11 730 281 128 40 chr17 13653261 13653529 -75851024 - L2 LINE L2 -164 3149 2825 1896 117 0 0 chr17 13653909 13654205 -75850348 - AluSq SINE Alu 0 324 29 1450 150 0 26 chr17 13654207 13654440 -75850113 - AluJo SINE Alu -12 300 74 343 325 49 16 chr17 13654513 13654636 -75849917 + MIR SINE MIR 9 135 -127 765 278 82 28 chr17 13654913 13655301 -75849252 + MER113 DNA MER1_type? 106 514 -7 1021 73 0 0 chr17 13655570 13655693 -75848860 - AluSq SINE Alu -118 195 73 2252 81 13 32 chr17 13656075 13656383 -75848170 - AluSq SINE Alu -11 302 1 1489 181 93 34 chr17 13657423 13657776 -75846777 + MLT1B LTR MaLR 4 377 -13 2191 117 0 0 chr17 13658949 13659240 -75845313 + AluSx SINE Alu 1 291 -21 263 56 74 0 chr17 13659241 13659295 -75845258 + (TA)n Simple_repeat Simple_repeat 1 58 0 351 200 11 42 chr17 13659295 13659390 -75845163 + L1MC4 LINE L1 6612 6703 -1339 25 75 0 0 chr17 13659401 13659454 -75845099 + AT_rich Low_complexity Low_complexity 1 53 0 454 254 78 74 chr17 13660338 13660622 -75843931 + Charlie8 DNA MER1_type 1 285 -2132 21 0 0 0 chr17 13660790 13660811 -75843742 + AT_rich Low_complexity Low_complexity 1 21 0 791 127 33 104 chr17 13661257 13661469 -75843084 + L1MA7 LINE L1 6093 6289 -2 314 315 11 0 chr17 13661543 13661635 -75842918 - Charlie8 DNA MER1_type -2151 266 174 2168 127 0 13 chr17 13663088 13663404 -75841149 - AluSq SINE Alu -1 312 1 2130 121 0 0 chr17 13663918 13664238 -75840315 - AluSx SINE Alu 0 320 1 750 276 46 86 chr17 13664248 13664358 -75840195 - L1MC4a LINE L1 -1879 5929 5816 2511 59 0 10 chr17 13664358 13664665 -75839888 - AluY SINE Alu -7 304 1 750 276 46 86 chr17 13664665 13664708 -75839845 - L1MC4a LINE L1 -1992 5816 5773 351 0 0 0 chr17 13664708 13664747 -75839806 + (CA)n Simple_repeat Simple_repeat 2 40 0 750 276 46 86 chr17 13664747 13665287 -75839266 - L1MC4a LINE L1 -2035 5773 5263 362 276 122 53 chr17 13665459 13665854 -75838699 - L1MC4a LINE L1 -1086 5060 4639 2498 60 3 0 chr17 13666713 13667013 -75837540 - AluY SINE Alu -10 301 1 954 175 26 10 chr17 13667508 13667702 -75836851 + L1MC1 LINE L1 5991 6187 -146 2168 125 14 0 chr17 13668158 13668454 -75836099 + AluSx SINE Alu 1 300 -12 5135 163 19 9 chr17 13668889 13669760 -75834793 - L1MC1 LINE L1 0 6333 5454 3720 189 81 26 chr17 13669760 13670573 -75833980 - L1MCa LINE L1 -5549 877 20 306 283 118 52 chr17 13670616 13670685 -75833868 + L1 LINE L1 4300 4363 -1783 2026 110 11 0 chr17 13670685 13670949 -75833604 + AluSx SINE Alu 1 267 -45 306 283 118 52 chr17 13670949 13671222 -75833331 + L1 LINE L1 4363 4658 -1488 189 0 0 0 chr17 13671449 13671470 -75833083 + (A)n Simple_repeat Simple_repeat 1 21 0 251 269 172 21 chr17 13672125 13672218 -75832335 - L2 LINE L2 0 3272 3166 2523 74 0 3 chr17 13672321 13672632 -75831921 - AluY SINE Alu -1 310 1 1166 188 9 23 chr17 13674211 13674429 -75830124 + MER20 DNA MER1_type 1 215 -4 2160 124 0 3 chr17 13675011 13675310 -75829243 - AluSg SINE Alu -10 300 3 876 168 0 0 chr17 13675941 13676072 -75828481 - FLAM_A SINE Alu -2 131 1 2281 96 0 17 chr17 13677354 13677655 -75826898 - AluSc SINE Alu -13 296 1 216 228 0 0 chr17 13677670 13677727 -75826826 + CT-rich Low_complexity Low_complexity 2 58 0 2331 104 3 0 chr17 13677878 13678176 -75826377 - AluSx SINE Alu -13 299 1 207 0 0 0 chr17 13678647 13678670 -75825883 + (CTTAG)n Simple_repeat Simple_repeat 2 24 0 1722 123 108 0 chr17 13678670 13678925 -75825628 - AluSx SINE Alu -29 283 1 477 210 4 128 chr17 13679070 13679230 -75825323 - L1MC5 LINE L1 -126 7835 7657 964 108 15 0 chr17 13679230 13679360 -75825193 + FLAM_C SINE Alu 1 132 -1 477 210 4 128 chr17 13679360 13679383 -75825170 - L1MC5 LINE L1 -304 7657 7686 2310 95 0 7 chr17 13679383 13679677 -75824876 + AluSx SINE Alu 1 292 -20 477 210 4 128 chr17 13679677 13679735 -75824818 - L1MC5 LINE L1 -274 7687 7623 217 342 72 45 chr17 13679775 13680149 -75824404 + L2 LINE L2 1560 1943 -1371 246 309 41 10 chr17 13680511 13680608 -75823945 + L2 LINE L2 2431 2530 -784 2183 121 3 3 chr17 13681254 13681561 -75822992 + AluSx SINE Alu 1 307 -5 303 28 0 0 chr17 13681582 13681618 -75822935 + (CA)n Simple_repeat Simple_repeat 2 37 0 339 311 48 48 chr17 13681727 13681933 -75822620 - L2 LINE L2 0 3313 3108 338 382 14 14 chr17 13682637 13682923 -75821630 + L1MC/D LINE L1 5575 5856 -314 802 299 16 24 chr17 13684021 13684272 -75820281 - MIR SINE MIR 0 262 14 357 299 112 8 chr17 13684626 13684760 -75819793 - MER5B DNA MER1_type 0 178 31 1292 79 37 0 chr17 13685589 13685753 -75818800 - AluY SINE Alu -1 310 141 2525 172 60 39 chr17 13686329 13686743 -75817810 + L1MB3 LINE L1 5580 6011 -172 2126 118 0 34 chr17 13686743 13687064 -75817489 - AluSx SINE Alu -2 310 1 2525 172 60 39 chr17 13687064 13687213 -75817340 + L1MB3 LINE L1 6011 6155 -28 2685 187 35 10 chr17 13687707 13688285 -75816268 - L1MB7 LINE L1 0 6184 5593 202 277 0 0 chr17 13689321 13689368 -75815185 - MIR SINE MIR -113 149 103 225 180 0 0 chr17 13689733 13689783 -75814770 + (CA)n Simple_repeat Simple_repeat 2 51 0 2098 98 7 27 chr17 13689829 13690124 -75814429 - AluSp SINE Alu -24 289 1 230 284 90 0 chr17 13690237 13690304 -75814249 - MIR3 SINE MIR -9 199 127 320 283 54 38 chr17 13690447 13690631 -75813922 - MARNA DNA Mariner -357 229 43 237 292 131 40 chr17 13691153 13691451 -75813102 - L1M4 LINE L1 -1975 4171 3847 2363 92 7 0 chr17 13693154 13693449 -75811104 + AluSg SINE Alu 1 297 -13 2047 115 0 11 chr17 13693451 13693730 -75810823 - AluSx SINE Alu -36 276 1 2248 102 7 0 chr17 13694319 13694612 -75809941 + AluSp SINE Alu 1 295 -18 28 29 0 0 chr17 13694937 13694972 -75809581 + AT_rich Low_complexity Low_complexity 1 35 0 594 239 94 55 chr17 13695246 13695555 -75808998 + MLT1D LTR MaLR 1 321 -184 2390 88 3 3 chr17 13695630 13695937 -75808616 + AluSp SINE Alu 1 307 -6 740 296 64 30 chr17 13696037 13696398 -75808155 + MLT1G1 LTR MaLR 11 400 -172 278 231 220 22 chr17 13696581 13696672 -75807881 + MLT1G1 LTR MaLR 472 580 -15 229 163 70 0 chr17 13696641 13696684 -75807869 + MLT1H1 LTR MaLR 510 555 0 * 216 202 313 0 chr17 13696694 13696793 -75807760 - MER5B DNA MER1_type -48 130 1 2240 105 0 20 chr17 13697365 13697671 -75806882 + AluSx SINE Alu 1 300 -12 352 259 58 36 chr17 13698474 13698613 -75805940 + MER103 DNA DNA 10 151 -15 1697 192 0 10 chr17 13698737 13699039 -75805514 + AluJb SINE Alu 1 299 -13 200 170 43 0 chr17 13699893 13699940 -75804613 + CT-rich Low_complexity Low_complexity 6 54 0 693 128 9 0 chr17 13700118 13700227 -75804326 - FLAM_A SINE Alu 0 142 33 489 305 14 0 chr17 13700819 13700960 -75803593 + MIR SINE MIR 99 241 -21 2475 93 0 0 chr17 13701625 13701935 -75802618 - AluY SINE Alu -1 310 1 312 335 66 11 chr17 13702256 13702438 -75802115 - MIR SINE MIR -48 214 23 1527 155 4 0 chr17 13703035 13703261 -75801292 + AluJb SINE Alu 85 311 -1 204 211 0 0 chr17 13703261 13703299 -75801254 + GA-rich Low_complexity Low_complexity 3 40 0 2429 91 0 0 chr17 13705232 13705530 -75799023 + AluSq SINE Alu 1 298 -15 2402 88 0 0 chr17 13705532 13705827 -75798726 - AluY SINE Alu -16 295 1 288 282 134 7 chr17 13706322 13706464 -75798089 - MIR3 SINE MIR -2 206 47 1919 135 24 9 chr17 13707486 13707719 -75796834 - MER44D DNA MER2_type -1882 609 381 2327 108 0 0 chr17 13707719 13708016 -75796537 - AluSx SINE Alu -15 297 1 1919 135 24 9 chr17 13708016 13708116 -75796437 - MER44D DNA MER2_type -2110 381 1 2695 39 7 0 chr17 13708383 13708692 -75795861 + AluY SINE Alu 1 311 0 251 311 48 90 chr17 13708692 13708850 -75795703 - L2 LINE L2 -85 3187 3035 256 250 12 0 chr17 13709047 13709127 -75795426 + (CA)n Simple_repeat Simple_repeat 1 81 0 2492 86 0 0 chr17 13709197 13709499 -75795054 + AluSx SINE Alu 1 302 -10 2197 127 0 0 chr17 13710624 13710923 -75793630 + AluSc SINE Alu 1 299 -10 2348 100 10 0 chr17 13711545 13711854 -75792699 - AluSx SINE Alu 0 312 1 187 224 17 52 chr17 13713958 13714016 -75790537 - L2 LINE L2 0 3272 3217 2465 88 0 0 chr17 13714267 13714564 -75789989 - AluSq SINE Alu -16 297 1 2034 130 7 3 chr17 13714595 13714887 -75789666 + AluSq SINE Alu 1 293 -20 24 0 0 0 chr17 13715176 13715200 -75789353 + AT_rich Low_complexity Low_complexity 1 24 0 231 347 151 20 chr17 13715487 13715686 -75788867 - MIR SINE MIR -18 244 20 2535 76 0 0 chr17 13715850 13716153 -75788400 + AluY SINE Alu 1 303 -8 2481 78 3 0 chr17 13716389 13716697 -75787856 + AluSp SINE Alu 1 309 -4 200 111 28 0 chr17 13718742 13718778 -75785775 + (CA)n Simple_repeat Simple_repeat 2 38 0 1249 87 50 3 chr17 13719348 13719569 -75784984 + AluSc SINE Alu 2 308 -1 334 244 143 25 chr17 13721129 13721248 -75783305 - MIR SINE MIR -111 151 19 2298 85 0 67 chr17 13721663 13721992 -75782561 + AluSq SINE Alu 1 307 -6 287 24 0 24 chr17 13724713 13724754 -75779799 + (CTTA)n Simple_repeat Simple_repeat 2 41 0 248 0 0 30 chr17 13724986 13725019 -75779534 + (ATTG)n Simple_repeat Simple_repeat 3 34 0 246 331 86 20 chr17 13730032 13730183 -75774370 - MER5B DNA MER1_type -17 161 1 199 230 40 70 chr17 13730500 13730600 -75773953 + L2 LINE L2 3106 3202 -111 389 314 66 0 chr17 13730874 13731011 -75773542 + MIR SINE MIR 52 197 -65 2219 191 43 5 chr17 13731447 13731887 -75772666 + MSTB2 LTR MaLR 1 457 0 268 224 203 63 chr17 13732177 13732320 -75772233 - MIR SINE MIR -78 184 22 219 176 49 211 chr17 13732473 13732532 -75772021 - MER5B DNA MER1_type -59 119 95 2425 65 3 0 chr17 13732532 13732823 -75771730 - AluY SINE Alu -19 292 1 219 176 49 211 chr17 13732823 13732905 -75771648 - MER5B DNA MER1_type -83 95 1 527 239 103 22 chr17 13733350 13733534 -75771019 - MER20 DNA MER1_type -17 202 4 195 323 16 0 chr17 13733603 13733665 -75770888 - MER5A DNA MER1_type -89 100 38 390 273 112 19 chr17 13733684 13733845 -75770708 - MER5B DNA MER1_type -2 176 1 2243 65 18 4 chr17 13734080 13734409 -75770144 + AluSq SINE Alu 1 333 0 368 305 70 5 chr17 13734438 13734638 -75769915 + L1ME4a LINE L1 5535 5747 -374 275 207 52 0 chr17 13734738 13734796 -75769757 + L1ME4a LINE L1 5979 6039 -82 662 230 23 17 chr17 13734929 13735103 -75769450 + MER58A DNA MER1_type 47 221 -3 468 269 133 45 chr17 13736567 13736876 -75767677 + LTR16B LTR ERVL 120 455 -9 251 268 0 37 chr17 13736890 13736972 -75767581 - L1ME4a LINE L1 -77 6044 5966 2407 86 7 0 chr17 13738955 13739259 -75765294 + AluSp SINE Alu 1 306 -7 2253 87 37 3 chr17 13739706 13740004 -75764549 + AluY SINE Alu 1 308 -3 2080 121 0 0 chr17 13740466 13740774 -75763779 + AluSx SINE Alu 5 312 0 2157 135 3 0 chr17 13740785 13741096 -75763457 + AluSx SINE Alu 1 312 0 2396 84 0 7 chr17 13741096 13741394 -75763159 + AluSc SINE Alu 1 296 -13 30 59 0 0 chr17 13741921 13741972 -75762581 + AT_rich Low_complexity Low_complexity 1 51 0 2251 110 7 7 chr17 13742575 13742875 -75761678 + AluSx SINE Alu 1 300 -12 2277 106 7 0 chr17 13743043 13743335 -75761218 - AluSg SINE Alu -16 294 1 2092 97 4 4 chr17 13746912 13747180 -75757373 + AluSc SINE Alu 35 302 -7 530 291 195 26 chr17 13747488 13748174 -75756379 - L2 LINE L2 -2 3311 2503 528 228 67 83 chr17 13748291 13748484 -75756069 - MIR SINE MIR 0 262 73 225 194 254 0 chr17 13748914 13748981 -75755572 + MER96 DNA MER1_type? 11 94 -81 1490 153 33 12 chr17 13749369 13749610 -75754943 + AluJo SINE Alu 1 246 -66 198 0 0 0 chr17 13749612 13749634 -75754919 + (A)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr17 13750076 13750104 -75754449 + AT_rich Low_complexity Low_complexity 1 28 0 901 130 7 0 chr17 13751379 13751542 -75753011 + AluSg/x SINE Alu 143 306 0 368 281 135 60 chr17 13751596 13751781 -75752772 + MIR SINE MIR 56 254 -8 1750 135 0 97 chr17 13752472 13752564 -75751989 + AluJo SINE Alu 3 102 -210 2314 107 0 0 chr17 13752564 13752863 -75751690 + AluSx SINE Alu 1 299 -13 1750 135 0 97 chr17 13752863 13753111 -75751442 + AluJo SINE Alu 102 310 -2 413 245 59 0 chr17 13753478 13753580 -75750973 + L2 LINE L2 3190 3297 -16 371 214 0 41 chr17 13754203 13754301 -75750252 - MLT1H LTR MaLR -398 151 58 2363 94 0 0 chr17 13754991 13755288 -75749265 + AluSx SINE Alu 1 297 -15 2107 174 34 15 chr17 13755288 13755403 -75749150 + Tigger3(Golem) DNA MER2_type 2614 2725 -303 2194 102 0 7 chr17 13755403 13755820 -75748733 - AluSp SINE Alu 0 417 3 2107 174 34 15 chr17 13755820 13756110 -75748443 + Tigger3(Golem) DNA MER2_type 2725 3028 0 189 337 24 0 chr17 13756205 13756288 -75748265 + L2 LINE L2 3187 3271 -1 1724 164 19 50 chr17 13756314 13756673 -75747880 - MLT1B LTR MaLR -16 374 27 1828 59 18 0 chr17 13756673 13756893 -75747660 + AluSg/x SINE Alu 83 306 -6 208 387 51 15 chr17 13756897 13757034 -75747519 - L2 LINE L2 -218 3054 2913 473 333 62 29 chr17 13757047 13757287 -75747266 - MIR SINE MIR -4 258 11 887 149 7 7 chr17 13757843 13758149 -75746404 + (TG)n Simple_repeat Simple_repeat 1 306 0 206 294 0 0 chr17 13758397 13758448 -75746105 + MIR SINE MIR 78 128 -134 471 256 12 16 chr17 13758496 13758901 -75745652 + CT-rich Low_complexity Low_complexity 1 403 0 2038 135 0 0 chr17 13758902 13759362 -75745191 - AluSx SINE Alu 0 460 1 331 205 25 16 chr17 13759363 13759485 -75745068 + CT-rich Low_complexity Low_complexity 1 123 0 1450 298 83 34 chr17 13759616 13760415 -75744138 - L2 LINE L2 -528 2786 1949 2005 141 0 0 chr17 13760536 13760846 -75743707 - AluSx SINE Alu 0 310 1 226 324 14 0 chr17 13760891 13760965 -75743588 - MER117 DNA MER1_type -121 76 2 280 135 27 0 chr17 13761191 13761265 -75743288 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 23 0 0 0 chr17 13761271 13761294 -75743259 + AT_rich Low_complexity Low_complexity 1 23 0 2060 103 0 77 chr17 13761307 13761618 -75742935 - AluSx SINE Alu -25 287 1 1802 179 32 6 chr17 13761642 13761989 -75742564 - MLT2D LTR ERVL -58 356 1 306 286 0 0 chr17 13762189 13762266 -75742287 - MIR SINE MIR 0 262 186 396 237 105 0 chr17 13763913 13764027 -75740526 + MER117 DNA MER1_type 18 143 -54 299 190 20 20 chr17 13764034 13764134 -75740419 + CT-rich Low_complexity Low_complexity 3 102 0 353 313 50 66 chr17 13764136 13764334 -75740219 - L2 LINE L2 -21 3251 3057 295 258 115 60 chr17 13764533 13764750 -75739803 - MER102a DNA MER1_type -2 328 100 297 0 0 0 chr17 13764954 13764987 -75739566 + (A)n Simple_repeat Simple_repeat 1 33 0 593 154 74 94 chr17 13765470 13765524 -75739029 - MER5A DNA MER1_type -1 188 134 2200 106 21 0 chr17 13765524 13765807 -75738746 + AluSg SINE Alu 1 289 -21 593 154 74 94 chr17 13765807 13765901 -75738652 - MER5A DNA MER1_type -55 134 43 2352 120 14 3 chr17 13767463 13767814 -75736739 - THE1A LTR MaLR 0 355 1 359 311 36 36 chr17 13768010 13768133 -75736420 + MIR3 SINE MIR 3 128 -80 2116 194 71 20 chr17 13768133 13768571 -75735982 + LOR1b LTR ERV1 2 461 0 359 311 36 36 chr17 13768571 13768614 -75735939 + MIR3 SINE MIR 127 169 -39 421 294 43 2 chr17 13768714 13768905 -75735648 - L1ME2 LINE L1 -5 6161 5966 973 201 110 3 chr17 13768943 13769359 -75735194 - MLT1D LTR MaLR 0 505 21 724 326 16 4 chr17 13769544 13769786 -75734767 - MIR SINE MIR -5 257 13 1289 214 78 96 chr17 13769859 13770291 -75734262 + MER34 LTR ERV1 1 422 -120 1967 160 3 31 chr17 13770291 13770609 -75733944 + AluSx SINE Alu 1 309 -3 1289 214 78 96 chr17 13770609 13770726 -75733827 + MER34 LTR ERV1 422 540 -2 2315 118 0 13 chr17 13770781 13771096 -75733457 - AluSx SINE Alu -1 311 1 2412 152 27 0 chr17 13771463 13771871 -75732682 + MSTB1 LTR MaLR 1 419 -13 1056 331 34 27 chr17 13771871 13772315 -75732238 - MLT1K LTR MaLR -135 453 7 674 303 60 23 chr17 13772595 13772961 -75731592 + LTR16A LTR ERVL 16 441 -9 341 161 65 0 chr17 13773050 13773112 -75731441 - L1MCc LINE L1 -5501 922 857 252 254 18 0 chr17 13773328 13773383 -75731170 + L2 LINE L2 2997 3052 -220 660 195 23 8 chr17 13773528 13773656 -75730897 - MLT2E LTR ERVL -47 581 452 2348 161 5 22 chr17 13773664 13774069 -75730484 + MER57A LTR ERV1 2 399 -4 347 215 8 85 chr17 13774139 13774269 -75730284 + MER112 DNA MER1_type 5 124 -136 1691 249 71 35 chr17 13774279 13774800 -75729753 + MER21B LTR ERV1 1 540 -323 2891 153 46 4 chr17 13774801 13775279 -75729274 - MER41E LTR ERV1 0 512 15 601 216 42 28 chr17 13775277 13775452 -75729101 + MER21B LTR ERV1 621 778 -85 * 2443 146 13 87 chr17 13775824 13776284 -75728269 - MSTB LTR MaLR 0 426 1 2329 97 10 3 chr17 13776620 13776930 -75727623 - AluSq SINE Alu -1 312 1 2228 116 0 0 chr17 13778310 13778604 -75725949 + AluSg SINE Alu 2 295 -15 463 200 9 9 chr17 13779283 13779393 -75725160 + MER5A DNA MER1_type 3 112 -77 1033 189 39 0 chr17 13781059 13781239 -75723314 + MER5A DNA MER1_type 2 188 -1 233 222 63 0 chr17 13781278 13781341 -75723212 + L2 LINE L2 3173 3239 -74 698 278 43 16 chr17 13781387 13781642 -75722911 - MIR SINE MIR 0 262 1 1935 153 10 13 chr17 13781796 13782097 -75722456 - AluJo SINE Alu -12 300 1 337 344 0 16 chr17 13782341 13782466 -75722087 + MIR SINE MIR 45 167 -95 2150 110 24 0 chr17 13782620 13782911 -75721642 - AluSq SINE Alu -15 298 1 211 227 0 0 chr17 13783597 13783641 -75720912 + A-rich Low_complexity Low_complexity 6 49 0 2337 72 28 0 chr17 13783793 13784084 -75720469 - AluY SINE Alu -12 299 1 1870 179 3 0 chr17 13784265 13784572 -75719981 + AluJo SINE Alu 2 309 -3 278 363 31 38 chr17 13784636 13784796 -75719757 - MIR3 SINE MIR -12 196 38 1803 213 17 8 chr17 13785186 13785548 -75719005 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr17 13785972 13785993 -75718560 + AT_rich Low_complexity Low_complexity 1 21 0 2355 101 0 19 chr17 13786464 13786780 -75717773 - AluSx SINE Alu -2 310 1 856 233 32 60 chr17 13786889 13786972 -75717581 - MIR SINE MIR -8 254 170 2114 124 7 0 chr17 13786972 13787270 -75717283 - AluSc SINE Alu -9 300 1 856 233 32 60 chr17 13787270 13787435 -75717118 - MIR SINE MIR -92 170 13 1058 262 27 46 chr17 13788766 13788836 -75715717 + L1ME1 LINE L1 5756 5826 -340 2394 95 0 0 chr17 13788836 13789142 -75715411 + AluSx SINE Alu 1 306 -6 1058 262 27 46 chr17 13789142 13789438 -75715115 + L1ME1 LINE L1 5826 6115 -51 180 0 0 0 chr17 13789758 13789778 -75714775 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2122 123 0 0 chr17 13789781 13790057 -75714496 - AluSx SINE Alu -36 276 1 2190 126 93 18 chr17 13790251 13790468 -75714085 - MSTA LTR MaLR 0 428 229 2111 109 0 3 chr17 13790468 13790751 -75713802 - AluSq SINE Alu -8 305 24 2190 126 93 18 chr17 13790751 13790931 -75713622 - MSTA LTR MaLR -199 229 1 2385 83 3 0 chr17 13791451 13791753 -75712800 + AluSq SINE Alu 1 303 -10 2201 103 3 0 chr17 13792492 13792783 -75711770 + AluSg SINE Alu 1 292 -18 23 0 0 0 chr17 13792783 13792806 -75711747 + AT_rich Low_complexity Low_complexity 1 23 0 501 266 90 62 chr17 13792830 13792950 -75711603 - L1ME4a LINE L1 -76 6045 5930 761 221 67 15 chr17 13792950 13793145 -75711408 - MER3 DNA MER1_type 0 209 5 501 266 90 62 chr17 13793145 13793274 -75711279 - L1ME4a LINE L1 -191 5930 5783 2274 110 0 0 chr17 13793274 13793573 -75710980 - AluSc SINE Alu -10 299 1 501 266 90 62 chr17 13793573 13793645 -75710908 - L1ME4a LINE L1 -338 5783 5714 801 110 0 0 chr17 13793662 13793771 -75710782 - AluSp/q SINE Alu -22 291 183 2229 116 3 0 chr17 13794114 13794408 -75710145 - AluSx SINE Alu -17 295 1 243 306 106 31 chr17 13794623 13794802 -75709751 - L1ME4a LINE L1 -1111 5035 4871 360 0 0 0 chr17 13794802 13794842 -75709711 + (TA)n Simple_repeat Simple_repeat 1 40 0 243 306 106 31 chr17 13794842 13795201 -75709352 - L1ME4a LINE L1 -1275 4871 4457 1623 164 33 33 chr17 13795292 13795597 -75708956 + AluJo SINE Alu 3 307 -5 1813 165 34 3 chr17 13795740 13796031 -75708522 - AluJb SINE Alu -12 300 1 505 284 73 14 chr17 13796244 13796462 -75708091 + MIR SINE MIR 2 232 -30 311 206 48 0 chr17 13796477 13796540 -75708013 - L1ME4a LINE L1 -1993 4153 4088 188 108 0 54 chr17 13796734 13796771 -75707782 - L2 LINE L2 0 3313 3279 299 327 108 50 chr17 13798874 13799134 -75705419 + L3 LINE CR1 433 707 -870 2129 121 3 3 chr17 13799466 13799771 -75704782 - AluSx SINE Alu -7 305 1 228 346 17 15 chr17 13800121 13800236 -75704317 - MIR SINE MIR -31 177 61 354 267 0 0 chr17 13800370 13800456 -75704097 - MIR SINE MIR -111 151 66 237 311 0 14 chr17 13800459 13800533 -75704020 - LTR28 LTR ERV1 0 1020 948 1346 210 49 37 chr17 13800580 13801098 -75703455 - LTR28 LTR ERV1 -39 755 416 757 134 37 159 chr17 13801163 13801342 -75703211 - LTR28 LTR ERV1 -286 166 1 2431 250 79 42 chr17 13801400 13802085 -75702468 - MER21B LTR ERV1 -51 812 93 2343 97 0 10 chr17 13802085 13802385 -75702168 - AluSx SINE Alu -15 297 1 2431 250 79 42 chr17 13802385 13802470 -75702083 - MER21B LTR ERV1 -770 93 13 905 199 29 24 chr17 13802594 13802800 -75701753 + MER6B DNA MER2_type 1 207 -3 225 0 0 0 chr17 13802895 13802920 -75701633 + (TTCCC)n Simple_repeat Simple_repeat 2 26 0 180 77 0 0 chr17 13803038 13803064 -75701489 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 715 258 11 50 chr17 13803084 13803266 -75701287 + MLT1D LTR MaLR 26 200 -426 527 164 10 0 chr17 13803276 13803380 -75701173 + GA-rich Low_complexity Low_complexity 1 105 0 1182 247 10 24 chr17 13803383 13803679 -75700874 + MLT1D LTR MaLR 179 470 -35 1677 185 74 35 chr17 13803708 13804102 -75700451 - LTR52 LTR ERVL -3 418 10 2477 97 0 0 chr17 13805088 13805398 -75699155 - AluSq SINE Alu -3 310 1 2469 160 36 2 chr17 13806813 13807225 -75697328 - MSTB LTR MaLR 0 426 1 1436 161 30 79 chr17 13807273 13807577 -75696976 - AluJo SINE Alu -23 289 1 649 209 103 143 chr17 13807777 13808037 -75696516 + L1ME3A LINE L1 4382 4615 -1531 1543 164 21 0 chr17 13808037 13808305 -75696248 + AluSx SINE Alu 40 312 0 649 209 103 143 chr17 13808305 13808555 -75695998 + L1ME3A LINE L1 4615 4873 -1273 657 252 124 68 chr17 13808557 13808823 -75695730 + L1ME3A LINE L1 5531 5811 -359 1359 217 45 0 chr17 13808823 13809113 -75695440 - MER58B DNA MER1_type -3 338 36 813 287 55 10 chr17 13809116 13809405 -75695148 + L1ME3A LINE L1 5812 6113 -57 755 229 57 57 chr17 13809494 13809738 -75694815 + MIR SINE MIR 19 262 0 2433 88 3 0 chr17 13810310 13810616 -75693937 - AluSg SINE Alu -3 307 1 1628 190 28 0 chr17 13810694 13810815 -75693738 + AluJb SINE Alu 2 118 -194 258 32 0 0 chr17 13810815 13810846 -75693707 + (CA)n Simple_repeat Simple_repeat 2 32 0 1628 190 28 0 chr17 13810846 13811008 -75693545 + AluJb SINE Alu 118 293 -19 186 171 24 0 chr17 13811064 13811105 -75693448 - L2 LINE L2 -1 3312 3271 679 286 16 4 chr17 13811286 13811488 -75693065 - L1ME LINE L1 -351 5770 5567 286 280 30 20 chr17 13811495 13811595 -75692958 - MIR3 SINE MIR 0 208 108 227 258 15 15 chr17 13812836 13812902 -75691651 + L2 LINE L2 3205 3270 -2 246 380 48 18 chr17 13813295 13813461 -75691092 + MER91A DNA MER1_type 1 171 -25 213 304 13 51 chr17 13813473 13813552 -75691001 + MER91A DNA MER1_type 118 193 -3 183 162 0 0 chr17 13813616 13813653 -75690900 + (TG)n Simple_repeat Simple_repeat 1 37 0 1683 161 23 23 chr17 13813746 13814056 -75690497 + AluJo SINE Alu 1 310 -2 240 111 0 0 chr17 13815222 13815258 -75689295 + (TG)n Simple_repeat Simple_repeat 1 36 0 2608 122 59 2 chr17 13815590 13815999 -75688554 - MSTB1 LTR MaLR 0 432 1 1496 169 103 0 chr17 13816650 13816923 -75687630 - AluJb SINE Alu -11 301 1 554 303 43 5 chr17 13817263 13817448 -75687105 + LTR16C LTR ERVL 97 288 -203 263 229 16 0 chr17 13817491 13817552 -75687001 + LTR16C LTR ERVL 429 490 -1 1288 200 48 54 chr17 13817648 13818074 -75686479 - MER39 LTR ERV1 -74 633 1 478 321 42 0 chr17 13819546 13819714 -75684839 - MIR SINE MIR -32 230 56 23 33 0 0 chr17 13819915 13819945 -75684608 + AT_rich Low_complexity Low_complexity 1 30 0 412 274 110 96 chr17 13820508 13820935 -75683618 - MLT1K LTR MaLR -16 572 140 1932 147 3 3 chr17 13821051 13821337 -75683216 - AluSq SINE Alu -27 286 1 1713 151 13 55 chr17 13821343 13821655 -75682898 - AluJb SINE Alu -13 299 1 1871 188 76 45 chr17 13821794 13822057 -75682496 - MLT1C LTR MaLR -3 464 180 2084 115 0 30 chr17 13822057 13822362 -75682191 - AluSg SINE Alu -14 296 1 1871 188 76 45 chr17 13822362 13822546 -75682007 - MLT1C LTR MaLR -287 180 3 2297 96 3 22 chr17 13823100 13823413 -75681140 + AluSp SINE Alu 1 307 -6 730 287 78 67 chr17 13823418 13823895 -75680658 - MER34 LTR ERV1 -48 494 13 570 258 240 37 chr17 13824018 13824159 -75680394 - L2 LINE L2 -245 3068 2957 2283 187 31 78 chr17 13824159 13824183 -75680370 + MER89 LTR ERV1 1 25 -534 2255 104 7 0 chr17 13824183 13824480 -75680073 + AluSp SINE Alu 3 301 -12 2283 187 31 78 chr17 13824480 13824767 -75679786 + MER89 LTR ERV1 25 324 -235 2164 114 0 4 chr17 13824767 13825048 -75679505 + AluSx SINE Alu 2 281 -31 360 0 0 0 chr17 13825054 13825094 -75679459 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2283 187 31 78 chr17 13825094 13825361 -75679192 + MER89 LTR ERV1 329 559 0 570 258 240 37 chr17 13825361 13825554 -75678999 - L2 LINE L2 -356 2957 2805 1585 209 70 9 chr17 13825554 13825898 -75678655 + MLT1A1 LTR MaLR 1 365 0 570 258 240 37 chr17 13825898 13826645 -75677908 - L2 LINE L2 -508 2805 1755 3404 133 28 3 chr17 13826645 13827182 -75677371 + MER34B LTR ERV1 2 536 -29 232 241 152 38 chr17 13828375 13828454 -75676099 + MIR SINE MIR 60 148 -60 218 197 237 0 chr17 13828491 13828567 -75675986 - MIR SINE MIR -11 251 158 239 244 73 12 chr17 13829525 13829607 -75674946 + MIR3 SINE MIR 121 207 -1 415 278 99 40 chr17 13829612 13829835 -75674718 - MIR SINE MIR -10 252 17 3076 131 6 17 chr17 13829853 13829891 -75674662 - MER31A LTR ERV1 -8 477 440 2050 128 35 67 chr17 13829891 13830267 -75674286 - THE1B LTR MaLR 0 364 1 3076 131 6 17 chr17 13830267 13830710 -75673843 - MER31A LTR ERV1 -45 440 1 2103 94 59 3 chr17 13830724 13831011 -75673542 - AluSg1 SINE Alu -6 303 1 1650 139 4 54 chr17 13831356 13831420 -75673133 - MER57A LTR ERV1 -137 266 200 1884 143 21 0 chr17 13831420 13831729 -75672824 + AluJb SINE Alu 1 315 0 1650 139 4 54 chr17 13831729 13831943 -75672610 - MER57A LTR ERV1 -203 200 1 21 57 0 0 chr17 13832696 13832731 -75671822 + AT_rich Low_complexity Low_complexity 1 35 0 450 153 0 0 chr17 13833390 13833462 -75671091 - MER89 LTR ERV1 -12 547 476 443 195 13 0 chr17 13833469 13833546 -75671007 - MER66B LTR ERV1 -382 104 27 922 245 134 59 chr17 13833552 13834013 -75670540 - MER34 LTR ERV1 -20 522 22 2481 137 46 19 chr17 13834013 13834430 -75670123 + MSTA LTR MaLR 1 428 0 922 245 134 59 chr17 13834430 13834446 -75670107 - MER34 LTR ERV1 -520 22 9 831 184 162 43 chr17 13834457 13834735 -75669818 - MER34C LTR ERV1 -238 347 37 227 245 0 0 chr17 13834734 13834783 -75669770 + MER89 LTR ERV1 297 345 -214 * 1920 151 37 37 chr17 13834780 13835157 -75669396 + MER66B LTR ERV1 109 485 -1 374 209 55 86 chr17 13835262 13835425 -75669128 + MER34C LTR ERV1 428 585 0 * 1693 144 24 10 chr17 13835425 13835722 -75668831 - MER89 LTR ERV1 -258 301 1 330 328 58 11 chr17 13835791 13835965 -75668588 - MIR SINE MIR -45 217 36 689 179 150 0 chr17 13836166 13836339 -75668214 - L1MB4 LINE L1 0 6180 5982 1012 253 68 40 chr17 13836341 13836846 -75667707 - MER39 LTR ERV1 0 649 4 1316 186 25 41 chr17 13836851 13837168 -75667385 - L1MB4 LINE L1 -202 5982 5671 2166 116 3 0 chr17 13837252 13837546 -75667007 - AluSq SINE Alu -18 295 1 2146 134 0 10 chr17 13838313 13838620 -75665933 - AluSx SINE Alu -8 304 1 1816 161 27 3 chr17 13839500 13839799 -75664754 + AluJo SINE Alu 6 311 -1 2142 125 0 14 chr17 13840050 13840345 -75664208 + AluSx SINE Alu 1 291 -21 2046 111 7 14 chr17 13841048 13841337 -75663216 + AluSc SINE Alu 1 287 -22 1442 219 0 32 chr17 13841350 13841661 -75662892 - AluJo SINE Alu -11 301 1 3774 159 28 14 chr17 13841662 13842381 -75662172 - L1MA7 LINE L1 -5 6286 5558 1960 112 95 0 chr17 13842552 13842837 -75661716 - AluSx SINE Alu 0 312 1 1483 211 145 8 chr17 13842859 13843142 -75661411 + MER34 LTR ERV1 1 354 -188 3669 53 0 7 chr17 13843142 13843597 -75660956 - L1PA5 LINE L1 0 6154 5703 1483 211 145 8 chr17 13843597 13843706 -75660847 + MER34 LTR ERV1 354 447 -95 1251 143 14 5 chr17 13843708 13843924 -75660629 - Tigger1 DNA MER2_type -1 2417 2200 576 169 92 39 chr17 13843922 13844052 -75660501 - Tigger1 DNA MER2_type -2281 137 1 * 395 174 128 0 chr17 13844052 13844136 -75660417 + MER34 LTR ERV1 445 539 -3 2240 88 21 0 chr17 13844196 13844479 -75660074 - AluSc SINE Alu -20 289 1 1821 142 3 86 chr17 13844761 13845098 -75659455 - AluSx SINE Alu -3 309 1 874 247 85 60 chr17 13845223 13845657 -75658896 - MER39 LTR ERV1 -1 706 69 257 270 27 0 chr17 13845744 13845818 -75658735 + MIR SINE MIR 93 168 -94 333 297 65 19 chr17 13848326 13848481 -75656072 - L3 LINE CR1 -224 1353 1192 2593 58 0 3 chr17 13848482 13848791 -75655762 + AluY SINE Alu 1 308 -3 2316 104 0 0 chr17 13849194 13849503 -75655050 + AluSc SINE Alu 1 309 0 1788 131 73 7 chr17 13849890 13850164 -75654389 - AluSx SINE Alu -18 294 3 25 31 0 0 chr17 13850381 13850413 -75654140 + AT_rich Low_complexity Low_complexity 1 32 0 1683 172 0 34 chr17 13850551 13850848 -75653705 - AluJo SINE Alu -21 291 5 24 32 0 0 chr17 13851057 13851088 -75653465 + AT_rich Low_complexity Low_complexity 1 31 0 698 109 9 0 chr17 13851501 13851611 -75652942 + (TTTC)n Simple_repeat Simple_repeat 4 114 0 332 278 142 6 chr17 13851611 13851780 -75652773 - HAL1 LINE L1 -710 1797 1606 332 304 47 14 chr17 13852103 13852163 -75652390 - MIR SINE MIR -44 218 161 2336 97 7 0 chr17 13852163 13852463 -75652090 - AluSp SINE Alu -11 302 1 332 304 47 14 chr17 13852463 13852550 -75652003 - MIR SINE MIR -101 161 66 696 56 0 0 chr17 13852601 13852690 -75651863 + (TTCC)n Simple_repeat Simple_repeat 2 90 0 1569 208 10 7 chr17 13852710 13853018 -75651535 - AluJo SINE Alu -2 310 2 536 271 8 0 chr17 13853953 13854082 -75650471 + MER58B DNA MER1_type 181 310 -31 231 259 95 26 chr17 13854191 13854307 -75650246 + L1ME LINE L1 5722 5845 -321 2028 132 4 0 chr17 13854334 13854643 -75649910 + AluSx SINE Alu 1 310 0 22 0 0 0 chr17 13854692 13854714 -75649839 + AT_rich Low_complexity Low_complexity 1 22 0 247 200 20 0 chr17 13854805 13854855 -75649698 + GA-rich Low_complexity Low_complexity 2 52 0 258 32 0 0 chr17 13854926 13854957 -75649596 + (TG)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr17 13854956 13854976 -75649577 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 2509 53 3 3 chr17 13855817 13856119 -75648434 - AluY SINE Alu -9 302 1 21 0 0 0 chr17 13856120 13856141 -75648412 + AT_rich Low_complexity Low_complexity 1 21 0 2241 118 0 0 chr17 13857018 13857314 -75647239 - AluSx SINE Alu -16 296 1 28 29 0 0 chr17 13857325 13857360 -75647193 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr17 13857552 13857606 -75646947 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr17 13857947 13857986 -75646567 + AT_rich Low_complexity Low_complexity 1 39 0 2480 77 3 0 chr17 13857996 13858296 -75646257 + AluSp SINE Alu 1 301 -12 207 100 0 0 chr17 13858314 13858344 -75646209 + (A)n Simple_repeat Simple_repeat 1 30 0 2053 131 10 0 chr17 13858369 13858660 -75645893 - AluSx SINE Alu -18 294 1 3796 214 42 74 chr17 13858770 13860025 -75644528 - L1MC4a LINE L1 -101 7707 6554 1629 128 21 21 chr17 13860025 13860267 -75644286 + AluSx SINE Alu 1 242 -70 450 300 59 56 chr17 13860396 13860572 -75643981 + L3 LINE CR1 1176 1350 -227 2209 110 0 3 chr17 13860572 13860872 -75643681 + AluSg SINE Alu 5 303 -7 450 300 59 56 chr17 13860872 13861085 -75643468 + L3 LINE CR1 1350 1566 -11 249 294 20 20 chr17 13861194 13861296 -75643257 + MIR SINE MIR 15 116 -146 398 351 96 0 chr17 13862422 13862610 -75641943 - L3 LINE CR1 -2 1575 1370 6228 100 7 15 chr17 13862651 13863747 -75640806 + L1PA14 LINE L1 5070 6161 0 2212 115 0 0 chr17 13863754 13864042 -75640511 + AluSg1 SINE Alu 1 288 -21 220 154 39 0 chr17 13864068 13864120 -75640433 + (CA)n Simple_repeat Simple_repeat 2 55 0 809 214 287 62 chr17 13864180 13864581 -75639972 + MLT1E2 LTR MaLR 52 603 -51 574 175 9 35 chr17 13864805 13864919 -75639634 + MER81 DNA DNA 3 113 -1 463 311 171 4 chr17 13865101 13865352 -75639201 + MLT1L LTR MaLR 315 607 -8 204 354 58 35 chr17 13866326 13866666 -75637887 + L2 LINE L2 2694 3036 -236 184 320 0 0 chr17 13866706 13866756 -75637797 + L2 LINE L2 3210 3259 -13 251 360 47 7 chr17 13866776 13866926 -75637627 - L3 LINE CR1 -212 1365 1210 421 227 7 97 chr17 13866984 13867138 -75637415 - MIR SINE MIR -51 211 72 330 239 40 23 chr17 13867727 13867903 -75636650 + (TG)n Simple_repeat Simple_repeat 2 180 0 198 0 0 0 chr17 13867951 13867973 -75636580 + (TG)n Simple_repeat Simple_repeat 2 23 0 332 122 47 19 chr17 13868033 13868140 -75636413 + (TG)n Simple_repeat Simple_repeat 2 111 0 192 261 148 26 chr17 13869628 13869743 -75634810 + MER5A DNA MER1_type 37 165 -24 23 0 0 0 chr17 13869855 13869878 -75634675 + AT_rich Low_complexity Low_complexity 1 23 0 303 266 29 54 chr17 13869972 13870111 -75634442 - MIR SINE MIR -59 149 16 2647 98 16 19 chr17 13870691 13871067 -75633486 + THE1C LTR MaLR 1 375 0 9511 125 62 9 chr17 13871069 13872567 -75631986 + THE1C-int LTR MaLR 3 1580 0 2682 99 16 11 chr17 13872567 13872940 -75631613 + THE1C LTR MaLR 1 375 0 215 185 0 19 chr17 13874357 13874411 -75630142 + CT-rich Low_complexity Low_complexity 4 56 0 300 231 48 39 chr17 13875015 13875119 -75629434 - MER103 DNA DNA -60 106 2 241 341 105 11 chr17 13876416 13876768 -75627785 - L1ME4a LINE L1 -177 5944 5560 26 30 0 0 chr17 13876827 13876860 -75627693 + AT_rich Low_complexity Low_complexity 1 33 0 410 335 53 29 chr17 13877041 13877250 -75627303 - MIR SINE MIR -13 249 36 218 328 0 0 chr17 13877281 13877345 -75627208 + (CATA)n Simple_repeat Simple_repeat 4 67 0 1221 256 20 10 chr17 13877417 13877714 -75626839 - AluJo SINE Alu -12 300 1 1990 92 4 11 chr17 13877761 13878034 -75626519 + AluSx SINE Alu 37 307 -5 23 33 0 0 chr17 13878074 13878104 -75626449 + AT_rich Low_complexity Low_complexity 1 30 0 337 272 76 0 chr17 13878181 13878273 -75626280 - Tigger7 DNA MER2_type -6 2481 2383 893 168 63 0 chr17 13878273 13878463 -75626090 - Tigger7 DNA MER2_type -64 2523 2322 1496 119 211 54 chr17 13878469 13878839 -75625714 + MSTA LTR MaLR 1 428 0 1044 204 56 0 chr17 13878841 13879037 -75625516 - Tigger7 DNA MER2_type -524 209 3 316 274 14 68 chr17 13879202 13879348 -75625205 - L1 LINE L1 -2362 3784 3647 304 286 104 54 chr17 13879608 13879888 -75624665 - L1 LINE L1 -2847 3299 3006 780 150 0 0 chr17 13880219 13880352 -75624201 - L1MA5 LINE L1 -2 6298 6166 381 355 63 37 chr17 13880745 13881128 -75623425 - L2 LINE L2 -1625 1689 1297 1123 100 0 0 chr17 13881136 13881324 -75623229 - AluSp SINE Alu 0 321 134 357 378 27 11 chr17 13881394 13881582 -75622971 - L2 LINE L2 -2087 1227 1037 2694 243 89 21 chr17 13881838 13881890 -75622663 + L1M4 LINE L1 3404 3451 -2695 1854 168 3 7 chr17 13881890 13882193 -75622360 + AluJo SINE Alu 3 304 -8 2694 243 89 21 chr17 13882193 13883190 -75621363 + L1M4 LINE L1 3451 4524 -1622 5689 191 37 14 chr17 13883227 13883784 -75620769 - L1MC1 LINE L1 0 6613 6070 2173 95 0 3 chr17 13883784 13884119 -75620434 - AluSg SINE Alu 0 334 1 5689 191 37 14 chr17 13884119 13885423 -75619130 - L1MC1 LINE L1 -543 6070 4700 4119 173 82 47 chr17 13885497 13885657 -75618896 - L1MC1 LINE L1 -5429 997 844 202 0 91 0 chr17 13885657 13885690 -75618863 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4119 173 82 47 chr17 13885690 13886474 -75618079 - L1MC1 LINE L1 -5582 844 20 3272 245 81 92 chr17 13886683 13888530 -75616023 - Charlie2b DNA MER1_type -954 1828 2 1593 218 88 38 chr17 13888560 13889037 -75615516 - MLT1D LTR MaLR 0 505 5 1911 9 5 14 chr17 13889207 13889428 -75615125 - AluYa5 SINE Alu 0 311 93 342 284 60 49 chr17 13890547 13890730 -75613823 - MIR3 SINE MIR -7 201 17 1557 149 15 79 chr17 13890760 13891089 -75613464 + AluJo SINE Alu 2 309 -3 1174 199 146 12 chr17 13891176 13891498 -75613055 - MLT1A1 LTR MaLR 0 365 1 512 275 0 14 chr17 13891725 13891867 -75612686 + MER117 DNA MER1_type 7 146 -51 359 302 79 16 chr17 13892773 13892962 -75611591 + L2 LINE L2 3074 3274 -39 650 277 62 32 chr17 13893535 13893777 -75610776 - MIR SINE MIR -6 256 10 1268 227 123 54 chr17 13894489 13894951 -75609602 - MLT1D LTR MaLR -9 496 3 261 263 19 23 chr17 13895308 13895399 -75609154 + MLT1J2 LTR MaLR 58 136 -314 1853 108 194 19 chr17 13896075 13896435 -75608118 - MSTA LTR MaLR -1 427 5 324 270 31 55 chr17 13896693 13896794 -75607759 - L1MC4a LINE L1 -1917 5891 5794 2158 191 109 27 chr17 13896794 13897318 -75607235 + MLT1F1 LTR MaLR 1 567 0 324 270 31 55 chr17 13897318 13897379 -75607174 - L1MC4a LINE L1 -2014 5794 5733 521 292 67 53 chr17 13897401 13897511 -75607042 - L1MC4a LINE L1 -2055 4091 3984 3900 97 21 0 chr17 13897511 13898099 -75606454 + L1MA2 LINE L1 5715 6314 0 521 292 67 53 chr17 13898099 13898477 -75606076 - L1MC4a LINE L1 -2162 3984 3595 2481 198 121 111 chr17 13898554 13899133 -75605420 - L1MC3 LINE L1 -8 7777 7088 292 266 0 43 chr17 13899133 13899227 -75605326 - MLT1F1 LTR MaLR -443 124 35 2481 198 121 111 chr17 13899227 13899653 -75604900 - L1MC3 LINE L1 -697 7088 6668 3475 197 25 56 chr17 13899666 13900517 -75604036 - L1MB7 LINE L1 -10 6174 5351 216 0 0 0 chr17 13900517 13900541 -75604012 + (CATAT)n Simple_repeat Simple_repeat 2 25 0 3475 197 25 56 chr17 13900541 13900578 -75603975 - L1MB7 LINE L1 -833 5351 5314 538 185 0 0 chr17 13900629 13900721 -75603832 + FLAM SINE Alu 39 130 -13 338 311 114 8 chr17 13900738 13900870 -75603683 + L1M4b LINE L1 798 943 -5916 22 0 0 0 chr17 13900875 13900897 -75603656 + AT_rich Low_complexity Low_complexity 1 22 0 1839 148 18 7 chr17 13900939 13901256 -75603297 + AluSx SINE Alu 3 322 0 29 28 0 0 chr17 13901555 13901591 -75602962 + AT_rich Low_complexity Low_complexity 1 36 0 249 285 47 101 chr17 13901713 13901865 -75602688 - L1M4 LINE L1 -1967 4179 4047 2234 98 7 0 chr17 13901865 13901991 -75602562 + AluY SINE Alu 1 125 -186 279 0 0 0 chr17 13901991 13902022 -75602531 + (CA)n Simple_repeat Simple_repeat 2 32 0 2234 98 7 0 chr17 13902022 13902201 -75602352 + AluY SINE Alu 125 308 -3 249 285 47 101 chr17 13902201 13902325 -75602228 - L1M4 LINE L1 -2099 4047 3918 396 299 33 33 chr17 13902509 13902720 -75601833 + L1MC4a LINE L1 5713 5923 -1885 2467 149 63 0 chr17 13902736 13902996 -75601557 + L1MA6 LINE L1 5196 5438 -862 272 27 27 0 chr17 13902996 13903033 -75601520 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 2467 149 63 0 chr17 13903033 13903269 -75601284 + L1MA6 LINE L1 5438 5734 -566 2936 161 52 51 chr17 13903312 13904984 -75599569 + MER61D-int LTR ERV1 478 2426 -2791 * 11615 116 14 12 chr17 13904968 13907046 -75597507 + MER61D-int LTR ERV1 3055 5206 -11 2920 45 0 0 chr17 13907047 13907401 -75597152 - L1PA4 LINE L1 0 6155 5802 4708 32 0 0 chr17 13907401 13908140 -75596413 + L1PA4 LINE L1 5075 5813 -342 2177 159 42 16 chr17 13908192 13908570 -75595983 + MER61D LTR ERV1 114 501 0 3268 150 16 3 chr17 13908571 13909136 -75595417 + L1MA6 LINE L1 5729 6300 0 23 0 0 0 chr17 13909138 13909161 -75595392 + AT_rich Low_complexity Low_complexity 1 23 0 728 313 111 48 chr17 13909183 13909912 -75594641 + L2 LINE L2 2522 3311 -2 2345 71 3 0 chr17 13910021 13910327 -75594226 + AluSp SINE Alu 1 307 0 31 58 0 0 chr17 13910398 13910450 -75594103 + AT_rich Low_complexity Low_complexity 1 52 0 358 198 87 0 chr17 13910540 13910666 -75593887 - L1MC/D LINE L1 -2377 5431 5295 676 315 134 39 chr17 13910945 13911242 -75593311 - L1M4 LINE L1 -2664 3482 3215 1715 205 0 0 chr17 13911242 13911554 -75592999 - AluJo SINE Alu 0 312 1 676 315 134 39 chr17 13911554 13911906 -75592647 - L1M4 LINE L1 -2931 3215 2898 2408 57 7 3 chr17 13911906 13912206 -75592347 + AluY SINE Alu 1 301 -10 676 315 134 39 chr17 13912206 13912587 -75591966 - L1M4 LINE L1 -3248 2898 2353 2302 99 0 3 chr17 13913689 13913992 -75590561 + AluSg SINE Alu 1 302 -8 2569 234 53 33 chr17 13914004 13914494 -75590059 + L1ME2 LINE L1 5236 5750 -414 1812 147 136 16 chr17 13914494 13914935 -75589618 - LTR54B LTR ERV1 -4 494 1 2569 234 53 33 chr17 13914935 13915249 -75589304 + L1ME2 LINE L1 5750 6056 -108 21 95 0 0 chr17 13916803 13916866 -75587687 + AT_rich Low_complexity Low_complexity 1 63 0 2581 151 16 23 chr17 13917333 13917770 -75586783 - Tigger2a DNA MER2_type 0 434 1 477 300 82 29 chr17 13918111 13918451 -75586102 + L1M4 LINE L1 3071 3428 -2718 2459 85 0 0 chr17 13918719 13919024 -75585529 + AluSg SINE Alu 1 305 -5 26 74 0 0 chr17 13919184 13919238 -75585315 + AT_rich Low_complexity Low_complexity 1 54 0 347 188 12 0 chr17 13919674 13919754 -75584799 - L2 LINE L2 -1618 1696 1616 663 279 140 52 chr17 13919757 13920370 -75584183 - L2 LINE L2 -1117 2197 1531 234 376 66 33 chr17 13921614 13921885 -75582668 + L2 LINE L2 2219 2498 -816 2450 91 0 0 chr17 13921928 13922235 -75582318 + AluSq SINE Alu 1 307 -6 1299 324 94 26 chr17 13922885 13923974 -75580579 - L2 LINE L2 -4 3309 2149 1550 240 67 74 chr17 13924246 13924465 -75580088 + MER77 LTR ERV1 53 272 -333 3260 108 2 0 chr17 13924465 13924917 -75579636 - MLT2A2 LTR ERVL 0 453 1 1550 240 67 74 chr17 13924917 13925248 -75579305 + MER77 LTR ERV1 272 599 -6 2106 154 46 14 chr17 13925251 13925601 -75578952 + THE1B LTR MaLR 3 363 -1 1633 144 9 72 chr17 13926272 13926618 -75577935 + MER33 DNA MER1_type 1 324 0 4416 147 20 0 chr17 13929095 13929802 -75574751 - L1PA16 LINE L1 -6 6160 5440 1253 191 70 0 chr17 13929802 13930074 -75574479 + L1 LINE L1 4644 4934 -1212 * 1676 182 33 14 chr17 13930061 13930424 -75574129 + L1 LINE L1 3963 4332 -1814 367 253 80 60 chr17 13931093 13931243 -75573310 + MIR3 SINE MIR 41 193 -15 2269 181 50 83 chr17 13931360 13932210 -75572343 - MER21A LTR ERV1 0 931 1 242 217 14 0 chr17 13932346 13932415 -75572138 + CT-rich Low_complexity Low_complexity 27 96 0 571 199 18 18 chr17 13932438 13932609 -75571944 + CT-rich Low_complexity Low_complexity 1 171 0 215 121 0 0 chr17 13932609 13932642 -75571911 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 670 179 7 7 chr17 13932642 13932787 -75571766 + CT-rich Low_complexity Low_complexity 2 146 0 276 30 0 0 chr17 13933002 13933035 -75571518 + (TG)n Simple_repeat Simple_repeat 1 33 0 357 109 0 0 chr17 13933156 13933211 -75571342 - MLT1F LTR MaLR 0 542 488 * 414 280 0 20 chr17 13933210 13933310 -75571243 - MLT1E LTR MaLR -485 108 11 698 239 81 113 chr17 13933323 13933658 -75570895 - MSTD-int LTR MaLR -7 1364 1041 775 287 42 7 chr17 13933925 13934214 -75570339 - MSTD-int LTR MaLR -765 606 308 1481 150 0 0 chr17 13934218 13934445 -75570108 - AluSg/x SINE Alu 0 310 84 287 322 171 20 chr17 13935533 13935825 -75568728 - L2 LINE L2 -5 3308 2973 203 303 49 49 chr17 13935872 13936014 -75568539 - L2 LINE L2 -419 2895 2754 1302 177 49 115 chr17 13936060 13936302 -75568251 - MER69 DNA AcHobo 0 2526 2270 2109 111 7 0 chr17 13936302 13936591 -75567962 + AluSq SINE Alu 2 292 -21 1302 177 49 115 chr17 13936591 13936759 -75567794 - MER69 DNA AcHobo -256 2270 2162 1702 173 4 4 chr17 13936759 13937036 -75567517 - AluJo SINE Alu -23 289 13 1302 177 49 115 chr17 13937036 13937200 -75567353 - MER69 DNA AcHobo -364 2162 1989 359 341 29 0 chr17 13937190 13937328 -75567225 - MER69 DNA AcHobo -2379 147 6 * 606 299 68 101 chr17 13938099 13938943 -75565610 - L1MEd LINE L1 -5228 891 76 4826 129 29 26 chr17 13939152 13939262 -75565291 - L1PA15 LINE L1 0 6165 6057 2982 93 12 12 chr17 13939262 13939693 -75564860 - MER57B LTR ERV1 -3 431 1 4826 129 29 26 chr17 13939693 13940397 -75564156 - L1PA15 LINE L1 -108 6057 5348 264 299 126 9 chr17 13940439 13940670 -75563883 - HAL1 LINE L1 -678 1829 1572 3370 201 125 153 chr17 13940682 13942339 -75562214 + L1MC3 LINE L1 4 1770 -4794 25 31 0 0 chr17 13942346 13942378 -75562175 + AT_rich Low_complexity Low_complexity 1 32 0 9248 159 6 9 chr17 13942382 13944249 -75560304 - L1PA13 LINE L1 -630 5531 3667 4265 87 52 5 chr17 13944249 13944867 -75559686 + L1PA13 LINE L1 5512 6160 -3 1903 274 60 18 chr17 13944875 13946166 -75558387 + L1MC3 LINE L1 1989 3284 -3280 809 218 27 32 chr17 13946170 13946358 -75558195 - MSTD LTR MaLR 0 396 210 348 24 0 0 chr17 13946407 13946448 -75558105 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1645 266 13 11 chr17 13946448 13946990 -75557563 + L1MC3 LINE L1 3598 4140 -2424 2227 211 55 0 chr17 13947026 13947485 -75557068 + MLT1D LTR MaLR 22 505 0 9332 210 96 28 chr17 13947485 13948760 -75555793 + L1MC3 LINE L1 4137 5324 -2879 303 28 0 0 chr17 13948760 13948796 -75555757 + (TA)n Simple_repeat Simple_repeat 2 37 0 9332 210 96 28 chr17 13948796 13951330 -75553223 + L1MC3 LINE L1 5324 8203 0 518 281 71 129 chr17 13951331 13951653 -75552900 - HAL1 LINE L1 -939 1568 1229 963 123 6 17 chr17 13951653 13951832 -75552721 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 1650 188 33 7 chr17 13951840 13952144 -75552409 - AluSx SINE Alu 0 312 1 518 281 71 129 chr17 13952144 13952161 -75552392 - HAL1 LINE L1 -1285 1222 1206 387 0 0 0 chr17 13952161 13952204 -75552349 + (TG)n Simple_repeat Simple_repeat 2 44 0 1490 63 0 0 chr17 13952212 13952401 -75552152 - L1PA5 LINE L1 0 6154 5966 518 281 71 129 chr17 13952401 13952631 -75551922 - HAL1 LINE L1 -1308 1199 1045 2698 132 27 2 chr17 13952631 13953072 -75551481 - L1PA13 LINE L1 0 6163 5712 518 281 71 129 chr17 13953072 13953367 -75551186 - HAL1 LINE L1 -1462 1045 735 2381 90 6 0 chr17 13953710 13954021 -75550532 + AluSp SINE Alu 1 313 0 1174 142 78 5 chr17 13954038 13954257 -75550296 + L1PA13 LINE L1 5929 6163 0 492 298 45 30 chr17 13954856 13955054 -75549499 + MIR SINE MIR 32 232 -30 207 111 28 0 chr17 13956397 13956433 -75548120 + (TA)n Simple_repeat Simple_repeat 2 38 0 1453 187 32 32 chr17 13956519 13956835 -75547718 + MER2 DNA MER2_type 28 343 -2 387 0 0 0 chr17 13956835 13956878 -75547675 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr17 13957424 13957445 -75547108 + AT_rich Low_complexity Low_complexity 1 21 0 270 250 38 8 chr17 13957563 13957695 -75546858 + (TA)n Simple_repeat Simple_repeat 2 137 0 409 288 109 8 chr17 13957736 13957993 -75546560 + L1ME4a LINE L1 5838 6120 -1 413 286 93 37 chr17 13958423 13958584 -75545969 - MIR SINE MIR -70 192 23 379 385 11 35 chr17 13958869 13959217 -75545336 - L1M4 LINE L1 -1850 4296 3957 1618 228 49 41 chr17 13959245 13959776 -75544777 + L1MC5 LINE L1 6996 7530 -431 613 211 51 24 chr17 13960058 13960248 -75544305 + MER63 DNA MER1_type 27 1688 0 203 364 21 57 chr17 13960939 13961079 -75543474 - MER5A DNA MER1_type -48 141 7 1629 193 145 0 chr17 13961094 13961426 -75543127 - MER57A LTR ERV1 -9 394 15 283 325 0 12 chr17 13962323 13962403 -75542150 + MIR SINE MIR 14 92 -170 1378 43 0 0 chr17 13962427 13962590 -75541963 - AluY SINE Alu -12 299 137 357 75 0 0 chr17 13963003 13963056 -75541497 + (TG)n Simple_repeat Simple_repeat 2 54 0 212 216 175 31 chr17 13963548 13963645 -75540908 - MIR SINE MIR -3 259 149 367 295 105 16 chr17 13964608 13964798 -75539755 + MIR SINE MIR 1 207 -55 315 314 0 0 chr17 13965031 13965117 -75539436 - L1MC4 LINE L1 -1343 6699 6614 625 331 65 41 chr17 13965147 13965706 -75538847 - L2 LINE L2 -20 3252 2683 308 284 139 16 chr17 13965753 13965947 -75538606 - L1MEc LINE L1 -4987 1397 1180 817 200 47 0 chr17 13965970 13966140 -75538413 + MER58A DNA MER1_type 47 224 0 414 295 118 20 chr17 13966142 13966396 -75538157 - L1MEc LINE L1 -5301 1262 984 2041 93 15 0 chr17 13966512 13966781 -75537772 - AluSx SINE Alu -1 311 39 2028 141 3 3 chr17 13967685 13967997 -75536556 + AluSx SINE Alu 1 312 0 324 0 0 0 chr17 13968009 13968045 -75536508 + (TG)n Simple_repeat Simple_repeat 2 37 0 421 295 174 0 chr17 13968513 13968703 -75535850 - MIR SINE MIR -6 256 34 225 0 0 0 chr17 13968882 13968907 -75535646 + (A)n Simple_repeat Simple_repeat 1 25 0 32 101 0 0 chr17 13969480 13969589 -75534964 + AT_rich Low_complexity Low_complexity 1 109 0 2270 90 0 0 chr17 13970091 13970379 -75534174 - AluSc SINE Alu -13 296 9 2497 265 69 26 chr17 13970421 13971202 -75533351 - L1MD2 LINE L1 -17 6342 5528 784 297 117 26 chr17 13971426 13971854 -75532699 - LTR33A LTR ERVL 0 523 57 266 225 18 108 chr17 13971945 13972056 -75532497 - L1ME LINE L1 -439 5682 5582 2132 116 30 0 chr17 13972176 13972477 -75532076 + AluSx SINE Alu 1 310 -2 2130 213 59 68 chr17 13972591 13973301 -75531252 - L1ME1 LINE L1 -5 6161 5458 544 345 83 5 chr17 13974462 13974864 -75529689 - L2 LINE L2 -227 3045 2612 571 334 76 23 chr17 13974878 13975312 -75529241 - L2 LINE L2 -926 2388 1932 511 159 24 87 chr17 13975763 13975820 -75528733 - FRAM SINE Alu -136 206 147 716 91 9 0 chr17 13975820 13975930 -75528623 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 511 159 24 87 chr17 13975930 13976028 -75528525 - FRAM SINE Alu -195 147 59 32 0 0 0 chr17 13976117 13976149 -75528404 + AT_rich Low_complexity Low_complexity 1 32 0 203 324 0 0 chr17 13977714 13977782 -75526771 + L2 LINE L2 2228 2295 -1019 207 146 0 0 chr17 13978430 13978471 -75526082 + (CA)n Simple_repeat Simple_repeat 1 41 0 5430 238 85 53 chr17 13979050 13979219 -75525334 + L1M4 LINE L1 1653 1815 -4432 1597 103 60 4 chr17 13979219 13979451 -75525102 + AluSx SINE Alu 50 294 -18 5430 238 85 53 chr17 13979451 13983086 -75521467 + L1M4 LINE L1 1815 5558 -689 2527 52 7 3 chr17 13983086 13983395 -75521158 + AluY SINE Alu 1 310 -1 5430 238 85 53 chr17 13983395 13983515 -75521038 + L1M4 LINE L1 5558 5673 -574 308 228 63 39 chr17 13983519 13983646 -75520907 + L1ME1 LINE L1 4176 4305 -1841 475 266 63 14 chr17 13983668 13983875 -75520678 + L1ME1 LINE L1 5637 5853 -313 284 379 29 29 chr17 13983925 13984099 -75520454 + MIR3 SINE MIR 17 190 -18 22 56 0 0 chr17 13984100 13984136 -75520417 + AT_rich Low_complexity Low_complexity 1 36 0 280 287 106 70 chr17 13984233 13984602 -75519951 + MLT1K LTR MaLR 187 568 -20 301 193 70 0 chr17 13984904 13984961 -75519592 + L2 LINE L2 3212 3272 0 1940 128 54 0 chr17 13987949 13988053 -75516500 + AluSq SINE Alu 1 98 -342 185 0 0 39 chr17 13988053 13988079 -75516474 + (CTACT)n Simple_repeat Simple_repeat 1 25 0 1940 128 54 0 chr17 13988079 13988398 -75516155 + AluSq SINE Alu 98 440 0 210 71 0 0 chr17 13989199 13989227 -75515326 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 366 148 50 79 chr17 13989324 13989425 -75515128 + MER53 DNA DNA 1 98 -91 2311 210 43 2 chr17 13989444 13989929 -75514624 - LTR53 LTR ERVL -14 505 1 293 239 0 0 chr17 13989929 13989989 -75514564 + MER53 DNA DNA 125 184 -5 1032 156 0 0 chr17 13990578 13990758 -75513795 + CT-rich Low_complexity Low_complexity 1 180 0 294 143 0 0 chr17 13990758 13990807 -75513746 + (TCC)n Simple_repeat Simple_repeat 3 51 0 321 115 0 33 chr17 13990812 13990873 -75513680 - Alu SINE Alu -6 296 238 695 123 48 7 chr17 13990874 13991020 -75513533 + CT-rich Low_complexity Low_complexity 1 152 0 1171 189 13 34 chr17 13991020 13991253 -75513300 - AluJo SINE Alu -3 309 82 212 227 0 0 chr17 13991672 13991716 -75512837 - L2 LINE L2 -2 3311 3268 2201 119 3 0 chr17 13991950 13992243 -75512310 - AluSq SINE Alu -19 294 1 202 331 72 14 chr17 13992300 13992439 -75512114 + L2 LINE L2 2851 2997 -275 898 185 113 0 chr17 13992442 13992664 -75511889 + MER33 DNA MER1_type 2 248 -76 1024 133 129 63 chr17 13992802 13992949 -75511604 - L1MA8 LINE L1 -3 6288 6152 1525 226 0 7 chr17 13992949 13993246 -75511307 - AluJo SINE Alu -15 297 3 1024 133 129 63 chr17 13993246 13993384 -75511169 - L1MA8 LINE L1 -139 6152 5984 2394 70 0 13 chr17 13993411 13993711 -75510842 + AluY SINE Alu 1 296 -15 323 211 0 0 chr17 13993712 13993783 -75510770 + MER33 DNA MER1_type 293 363 0 284 314 53 92 chr17 13993805 13994012 -75510541 + L2 LINE L2 3030 3228 -44 * 938 333 118 35 chr17 13994006 13994691 -75509862 + L3 LINE CR1 621 1380 -197 2188 107 17 3 chr17 13994691 13994989 -75509564 - AluSq SINE Alu -11 302 1 938 333 118 35 chr17 13994989 13995086 -75509467 + L3 LINE CR1 1380 1468 -109 833 295 24 10 chr17 13995400 13995688 -75508865 - MER45C DNA AcHobo -626 327 36 2389 69 0 26 chr17 13995747 13996053 -75508500 - AluY SINE Alu -13 298 1 21 0 0 0 chr17 13996710 13996731 -75507822 + AT_rich Low_complexity Low_complexity 1 21 0 30 45 0 0 chr17 13997818 13997862 -75506691 + AT_rich Low_complexity Low_complexity 1 44 0 2200 104 14 0 chr17 13998613 13998900 -75505653 - AluSx SINE Alu -21 291 1 264 231 83 37 chr17 14000001 14000109 -75504444 + L1ME LINE L1 5518 5630 -491 384 22 0 0 chr17 14000633 14000678 -75503875 + (CA)n Simple_repeat Simple_repeat 1 45 0 747 226 42 6 chr17 14001544 14001712 -75502841 + MER5B DNA MER1_type 5 178 0 2267 82 0 0 chr17 14003449 14003769 -75500784 + AluSg SINE Alu 1 320 0 2592 49 0 13 chr17 14004467 14004775 -75499778 - AluY SINE Alu -7 304 1 465 295 32 32 chr17 14004851 14005068 -75499485 - MLT2F LTR ERVL -9 654 438 399 251 128 16 chr17 14005217 14005404 -75499149 - MLT2F LTR ERVL -455 208 1 510 204 0 0 chr17 14005720 14005833 -75498720 + GA-rich Low_complexity Low_complexity 4 116 0 212 258 150 42 chr17 14006381 14006501 -75498052 - MIR SINE MIR -10 252 120 1981 157 11 19 chr17 14007208 14007571 -75496982 + MLT1A1 LTR MaLR 1 360 -5 1976 124 17 3 chr17 14009865 14010156 -75494397 + AluSc SINE Alu 1 295 -14 2284 114 0 0 chr17 14010620 14010919 -75493634 + AluSx SINE Alu 4 302 -10 1101 191 69 3 chr17 14011327 14011749 -75492804 + MLT1D LTR MaLR 2 497 -8 183 333 0 0 chr17 14011996 14012044 -75492509 + L2 LINE L2 3242 3289 -24 729 211 0 0 chr17 14012053 14012186 -75492367 + FLAM_C SINE Alu 1 133 0 33 0 0 0 chr17 14012186 14012219 -75492334 + AT_rich Low_complexity Low_complexity 1 33 0 766 233 26 60 chr17 14014021 14014287 -75490266 - MER102a DNA MER1_type 0 330 74 241 337 0 42 chr17 14015048 14015143 -75489410 + MIR SINE MIR 37 127 -81 393 240 68 52 chr17 14015297 14015351 -75489202 - MLT1K LTR MaLR -10 578 526 194 62 31 0 chr17 14015351 14015383 -75489170 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 393 240 68 52 chr17 14015383 14015520 -75489033 - MLT1K LTR MaLR -62 526 384 1052 217 16 8 chr17 14016066 14016310 -75488243 - L1MB7 LINE L1 -16 6168 5923 2442 211 51 8 chr17 14016315 14016841 -75487712 + MER74A LTR ERVL 1 549 -9 1948 156 18 42 chr17 14016845 14016927 -75487626 - L1MB7 LINE L1 -251 5933 5851 3073 139 29 62 chr17 14016927 14017383 -75487170 - MER4B LTR ERV1 0 610 179 2007 130 4 0 chr17 14017383 14017660 -75486893 - AluSx SINE Alu -34 278 1 3073 139 29 62 chr17 14017660 14017834 -75486719 - MER4B LTR ERV1 -431 179 1 1948 156 18 42 chr17 14017834 14018255 -75486298 - L1MB7 LINE L1 -333 5851 5362 348 221 0 44 chr17 14018262 14018375 -75486178 - L1MB7 LINE L1 -1295 4851 4744 1305 247 28 42 chr17 14018463 14018896 -75485657 + MER39 LTR ERV1 259 685 -22 694 178 30 93 chr17 14019426 14019662 -75484891 - L1MB8 LINE L1 -12 6166 5946 1328 200 7 102 chr17 14019749 14020159 -75484394 + MLT1A2 LTR MaLR 4 374 0 284 164 15 60 chr17 14020269 14020336 -75484217 - LTR8A LTR ERV1 0 727 664 2496 191 63 44 chr17 14020386 14021051 -75483502 - LTR8A LTR ERV1 -49 678 1 590 248 12 81 chr17 14021081 14021339 -75483214 - L1M4b LINE L1 -5643 1216 977 933 235 45 87 chr17 14021515 14021980 -75482573 - LTR56 LTR ERV1 0 437 1 1236 202 72 35 chr17 14022134 14022511 -75482042 - LTR56-int LTR ERV1 -211 4912 4522 851 284 69 32 chr17 14022515 14022583 -75481970 - Charlie7 DNA MER1_type -2126 486 422 2238 114 0 3 chr17 14022583 14022889 -75481664 - AluSx SINE Alu -7 305 1 851 284 69 32 chr17 14022889 14023285 -75481268 - Charlie7 DNA MER1_type -2190 422 5 1095 176 22 57 chr17 14023307 14023534 -75481019 - MER20 DNA MER1_type 0 219 1 2000 77 91 11 chr17 14023855 14024140 -75480413 - AluSp SINE Alu -5 308 1 393 271 86 58 chr17 14024638 14024999 -75479554 + L1ME4a LINE L1 5513 5883 -238 2080 99 0 26 chr17 14025599 14025901 -75478652 - AluSg1 SINE Alu -15 294 1 281 365 21 0 chr17 14026064 14026160 -75478393 + L2 LINE L2 3173 3270 -2 291 300 0 27 chr17 14026395 14026505 -75478048 + CT-rich Low_complexity Low_complexity 1 107 0 682 162 28 22 chr17 14026517 14026696 -75477857 + CT-rich Low_complexity Low_complexity 1 180 0 645 300 162 40 chr17 14026975 14027345 -75477208 + L3 LINE CR1 656 1097 -480 2163 102 3 0 chr17 14027345 14027655 -75476898 - AluSp SINE Alu 0 311 1 645 300 162 40 chr17 14027655 14027753 -75476800 + L3 LINE CR1 1097 1182 -395 412 226 110 34 chr17 14027833 14027979 -75476574 - MLT1J1 LTR MaLR -38 408 252 2303 82 0 0 chr17 14028133 14028441 -75476112 - AluY SINE Alu 0 308 1 2205 125 0 3 chr17 14028826 14029139 -75475414 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 14029206 14029228 -75475325 + AT_rich Low_complexity Low_complexity 1 22 0 959 156 0 72 chr17 14029282 14029462 -75475091 - AluJb SINE Alu -12 300 134 417 304 23 39 chr17 14029581 14029771 -75474782 - MIR SINE MIR -34 228 43 218 196 0 20 chr17 14030012 14030063 -75474490 + CT-rich Low_complexity Low_complexity 2 51 0 2274 109 0 0 chr17 14031464 14031768 -75472785 - AluSg1 SINE Alu -3 306 3 264 380 80 16 chr17 14031985 14032172 -75472381 + MIR SINE MIR 20 218 -44 238 305 201 0 chr17 14033661 14033815 -75470738 + MIR SINE MIR 22 206 -56 2461 94 0 0 chr17 14033830 14034137 -75470416 + AluSc SINE Alu 1 307 -2 2245 114 27 0 chr17 14034657 14034956 -75469597 + AluSg SINE Alu 1 307 -3 2119 112 11 0 chr17 14036463 14036750 -75467803 - AluSx SINE Alu -22 290 1 27 49 0 0 chr17 14037118 14037159 -75467394 + AT_rich Low_complexity Low_complexity 1 41 0 199 298 117 0 chr17 14037189 14037283 -75467270 + MIR SINE MIR 77 181 -81 2257 60 7 11 chr17 14039840 14040169 -75464384 - AluY SINE Alu 0 328 1 3518 137 46 37 chr17 14040960 14041147 -75463406 - L1PA16 LINE L1 -2 6164 5980 2400 89 0 0 chr17 14041147 14041440 -75463113 - AluSc SINE Alu -16 293 1 3518 137 46 37 chr17 14041440 14041929 -75462624 - L1PA16 LINE L1 -186 5980 5482 352 316 22 29 chr17 14042045 14042184 -75462369 + HAL1 LINE L1 1227 1364 -1143 364 347 143 48 chr17 14042213 14043245 -75461308 - L2 LINE L2 -21 3251 2136 416 295 105 50 chr17 14043697 14043955 -75460598 + HAL1b LINE L1 303 574 -774 3757 261 135 42 chr17 14045718 14047392 -75457161 - HAL1 LINE L1 -6 2501 983 2158 110 14 0 chr17 14047392 14047683 -75456870 + AluSc SINE Alu 1 295 -14 3757 261 135 42 chr17 14047683 14047769 -75456784 - HAL1 LINE L1 -1524 983 906 2060 143 21 19 chr17 14047769 14048141 -75456412 - THE1C LTR MaLR -2 373 1 3757 261 135 42 chr17 14048141 14048326 -75456227 - HAL1 LINE L1 -1601 906 740 1861 152 28 0 chr17 14048326 14048609 -75455944 - AluJb SINE Alu -21 291 1 3757 261 135 42 chr17 14048609 14048949 -75455604 - HAL1 LINE L1 -1767 740 2 346 292 88 102 chr17 14049036 14049409 -75455144 - MLT1I LTR MaLR 0 409 42 1364 173 153 3 chr17 14049457 14049757 -75454796 + MER7A DNA MER2_type 1 343 -3 2835 7 0 0 chr17 14050045 14050354 -75454199 - AluYa5 SINE Alu -2 309 1 1770 116 59 98 chr17 14050851 14051240 -75453313 - THE1C LTR MaLR 0 375 2 1986 136 7 0 chr17 14052013 14052299 -75452254 - AluSq SINE Alu -16 297 10 338 293 32 64 chr17 14052893 14053081 -75451472 - MIR SINE MIR -61 201 20 23 54 0 0 chr17 14053244 14053281 -75451272 + AT_rich Low_complexity Low_complexity 1 37 0 2159 102 3 0 chr17 14054126 14054409 -75450144 - AluSq SINE Alu -17 296 13 595 333 38 0 chr17 14054472 14054682 -75449871 + MER90 LTR ERV1 10 227 -387 837 236 8 62 chr17 14054713 14054972 -75449581 + MER90 LTR ERV1 370 614 0 274 263 5 134 chr17 14055426 14055635 -75448918 - MER102b DNA MER1_type -3 338 157 503 130 10 0 chr17 14055635 14055735 -75448818 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 210 203 27 14 chr17 14055725 14055773 -75448780 + CT-rich Low_complexity Low_complexity 2 53 -23 * 2239 136 0 0 chr17 14055773 14056083 -75448470 - AluSg SINE Alu 0 310 1 210 203 27 14 chr17 14056083 14056108 -75448445 + CT-rich Low_complexity Low_complexity 53 76 0 558 187 0 0 chr17 14056136 14056243 -75448310 + MLT2B2 LTR ERVL 409 515 0 3360 224 77 41 chr17 14056252 14057213 -75447340 - L1M4 LINE L1 -5543 999 4 1875 122 0 0 chr17 14057547 14057802 -75446751 + AluSg SINE Alu 45 299 -11 265 270 84 51 chr17 14057817 14058032 -75446521 + L1ME4a LINE L1 5712 5933 -188 882 242 148 48 chr17 14060582 14060601 -75443952 - L2 LINE L2 -6 3307 3291 2170 110 0 17 chr17 14060601 14060900 -75443653 + AluSg SINE Alu 1 294 -16 882 242 148 48 chr17 14060900 14061538 -75443015 - L2 LINE L2 -22 3291 2576 197 175 0 25 chr17 14061661 14061701 -75442852 + L2 LINE L2 3263 3301 -12 307 270 98 76 chr17 14062365 14062562 -75441991 - MIR SINE MIR -21 187 14 323 291 129 9 chr17 14062979 14063189 -75441364 - L1ME LINE L1 -648 5522 5288 341 312 164 15 chr17 14063203 14063533 -75441020 - L1ME LINE L1 -908 5238 4860 189 0 0 0 chr17 14063998 14064019 -75440534 + (A)n Simple_repeat Simple_repeat 1 21 0 491 101 13 13 chr17 14064390 14064469 -75440084 + MADE1 DNA Mariner 2 80 0 1142 179 59 106 chr17 14064502 14064927 -75439626 + MLT1D LTR MaLR 1 405 -100 4733 166 8 4 chr17 14064930 14065944 -75438609 - L1PA16 LINE L1 -14 6152 5138 313 303 167 54 chr17 14066036 14066353 -75438200 + L2 LINE L2 1899 2251 -1063 665 82 10 0 chr17 14066688 14066785 -75437768 + (CAT)n Simple_repeat Simple_repeat 1 98 0 2073 86 32 11 chr17 14068003 14068325 -75436228 + AluSq SINE Alu 1 328 0 2361 103 0 3 chr17 14068647 14068949 -75435604 + AluSx SINE Alu 3 303 -9 570 297 138 67 chr17 14071333 14072346 -75432207 + L1ME3A LINE L1 3950 5034 -1112 537 278 60 43 chr17 14072516 14073019 -75431534 + L1MC/D LINE L1 5258 5780 -477 1776 177 6 6 chr17 14073511 14073839 -75430714 + MLT1A1 LTR MaLR 1 328 -37 230 98 0 24 chr17 14074013 14074054 -75430499 - MLT2C1 LTR ERVL -8 389 350 887 158 19 0 chr17 14074060 14074218 -75430335 - MLT1A2 LTR MaLR -213 161 1 1919 166 0 3 chr17 14074541 14074837 -75429716 - AluJb SINE Alu -17 295 1 244 248 23 39 chr17 14075242 14075371 -75429182 + L1P LINE L1 5293 5419 -735 39 0 0 0 chr17 14075874 14075913 -75428640 + AT_rich Low_complexity Low_complexity 1 39 0 427 247 98 52 chr17 14075940 14076134 -75428419 + L1ME3A LINE L1 5196 5398 -748 295 283 120 37 chr17 14076202 14076576 -75427977 + L1ME3A LINE L1 5486 5890 -280 1035 171 0 0 chr17 14076788 14076952 -75427601 - AluSg/x SINE Alu -12 298 135 528 328 149 9 chr17 14077098 14077548 -75427005 + L1ME4a LINE L1 5320 5831 -290 253 221 39 13 chr17 14077597 14077674 -75426879 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 1568 223 55 26 chr17 14078032 14078417 -75426136 - MSTD LTR MaLR 0 396 1 553 146 0 0 chr17 14078421 14078510 -75426043 - MSTD LTR MaLR -307 89 1 2523 190 42 15 chr17 14078802 14078908 -75425645 - MER74A LTR ERVL 0 558 456 180 0 0 0 chr17 14078908 14078928 -75425625 + (CACAC)n Simple_repeat Simple_repeat 1 20 0 2523 190 42 15 chr17 14078928 14079362 -75425191 - MER74A LTR ERVL -102 456 3 228 197 82 0 chr17 14079818 14079879 -75424674 - L1MB4 LINE L1 -13 6167 6102 1693 154 226 37 chr17 14080241 14080702 -75423851 - LTR10A LTR ERV1 -61 548 1 2488 63 3 0 chr17 14080855 14081154 -75423399 - AluY SINE Alu -11 300 1 1914 156 13 19 chr17 14081253 14081560 -75422993 - AluJo SINE Alu -7 305 1 2086 137 0 0 chr17 14081853 14082145 -75422408 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 14082161 14082182 -75422371 + AT_rich Low_complexity Low_complexity 1 21 0 1126 224 7 31 chr17 14082182 14082217 -75422336 - L1MB7 LINE L1 -19 6165 6131 1990 118 0 7 chr17 14082217 14082489 -75422064 - AluSx SINE Alu -9 303 34 1126 224 7 31 chr17 14082489 14082739 -75421814 - L1MB7 LINE L1 -53 6131 5887 644 250 85 24 chr17 14083056 14083268 -75421285 + MIR SINE MIR 20 244 -18 2294 115 0 0 chr17 14085087 14085391 -75419162 + AluSq SINE Alu 2 305 -8 305 348 40 45 chr17 14085467 14085668 -75418885 - L2 LINE L2 0 3272 3073 302 286 118 53 chr17 14085828 14086185 -75418368 + L2 LINE L2 2934 3313 0 288 290 14 0 chr17 14087104 14087194 -75417359 - MIR SINE MIR -78 130 35 399 264 62 23 chr17 14087999 14088128 -75416425 + MIR SINE MIR 11 144 -118 2196 100 3 0 chr17 14088385 14088676 -75415877 - AluSg SINE Alu -18 292 1 2498 53 0 3 chr17 14088683 14088986 -75415567 - AluY SINE Alu -6 305 4 2158 117 15 3 chr17 14089549 14089882 -75414671 - L1MC1 LINE L1 0 6333 5997 1957 148 0 13 chr17 14090111 14090409 -75414144 + AluSx SINE Alu 1 294 -18 468 235 31 19 chr17 14090439 14090762 -75413791 + (TA)n Simple_repeat Simple_repeat 1 327 0 249 303 43 19 chr17 14090877 14091039 -75413514 - L1MB7 LINE L1 -2073 5735 5570 597 209 36 75 chr17 14091146 14091402 -75413151 + MER57B LTR ERV1 10 266 -137 402 211 11 0 chr17 14091516 14091606 -75412947 + MER57A LTR ERV1 313 403 0 1869 155 11 3 chr17 14092005 14092289 -75412264 + AluJo SINE Alu 9 294 -18 322 279 132 23 chr17 14093517 14093646 -75410907 - MIR SINE MIR -71 191 49 1642 234 24 53 chr17 14093968 14094277 -75410276 + L1M4 LINE L1 2627 2944 -3202 2229 100 10 6 chr17 14094277 14094588 -75409965 + AluSx SINE Alu 1 312 0 1642 234 24 53 chr17 14094588 14094797 -75409756 + L1M4 LINE L1 2944 3125 -3021 718 172 13 25 chr17 14094797 14094954 -75409599 + L1PB4 LINE L1 5999 6153 -3 1642 234 24 53 chr17 14094954 14095072 -75409481 + L1M4 LINE L1 3125 3245 -2901 21 0 0 0 chr17 14096025 14096046 -75408507 + AT_rich Low_complexity Low_complexity 1 21 0 239 217 17 9 chr17 14097219 14097290 -75407263 - Charlie8 DNA MER1_type -1000 1417 1361 455 299 94 40 chr17 14097325 14097676 -75406877 - Charlie8 DNA MER1_type -1976 441 72 244 250 116 9 chr17 14098059 14098171 -75406382 + L1ME LINE L1 5748 5871 -250 21 57 0 0 chr17 14098258 14098293 -75406260 + AT_rich Low_complexity Low_complexity 1 35 0 371 235 175 49 chr17 14098543 14098726 -75405827 + MLT1J LTR MaLR 3 208 -303 319 263 20 10 chr17 14099453 14099552 -75405001 - L1MCa LINE L1 -6320 106 7 1021 181 87 46 chr17 14099786 14100161 -75404392 + MSTC LTR MaLR 1 428 0 275 311 0 0 chr17 14100436 14100510 -75404043 - MIR SINE MIR -93 115 42 269 373 79 17 chr17 14100541 14100718 -75403835 - MER5A DNA MER1_type -1 188 1 2211 95 7 0 chr17 14100844 14101128 -75403425 + AluSg SINE Alu 1 286 -24 1740 71 0 0 chr17 14101402 14101641 -75402912 + L1PB1 LINE L1 5553 5791 -360 442 61 0 101 chr17 14101641 14101839 -75402714 + (TA)n Simple_repeat Simple_repeat 1 178 0 436 62 10 93 chr17 14101860 14102054 -75402499 + (TA)n Simple_repeat Simple_repeat 2 179 0 332 153 0 0 chr17 14102169 14102228 -75402325 + L1PB1 LINE L1 5793 5851 -300 203 196 22 0 chr17 14102344 14102390 -75402163 + GA-rich Low_complexity Low_complexity 2 48 0 1997 78 85 0 chr17 14102391 14102674 -75401879 + L1PB1 LINE L1 5838 6144 -7 482 282 206 10 chr17 14102697 14102906 -75401647 - MIR SINE MIR -5 257 8 482 290 50 54 chr17 14102998 14103257 -75401296 + MIR SINE MIR 3 260 -2 25 31 0 0 chr17 14103259 14103291 -75401262 + AT_rich Low_complexity Low_complexity 1 32 0 978 117 0 0 chr17 14103484 14103629 -75400924 - L1PB1 LINE L1 -138 6013 5869 217 174 22 0 chr17 14103860 14103906 -75400647 + GA-rich Low_complexity Low_complexity 2 48 0 22 0 0 0 chr17 14104036 14104058 -75400495 + AT_rich Low_complexity Low_complexity 1 22 0 367 323 82 56 chr17 14104102 14104603 -75399950 + L1 LINE L1 4757 5276 -870 2177 109 0 45 chr17 14104603 14104916 -75399637 + AluSc SINE Alu 1 299 -10 367 323 82 56 chr17 14104916 14104972 -75399581 + L1 LINE L1 5276 5329 -817 32 57 0 0 chr17 14105070 14105123 -75399430 + AT_rich Low_complexity Low_complexity 1 53 0 277 211 32 11 chr17 14105160 14105255 -75399298 + L1ME4a LINE L1 6023 6119 -2 290 329 77 43 chr17 14106414 14106648 -75397905 + MIR SINE MIR 6 247 -15 661 298 143 40 chr17 14106742 14107162 -75397391 + L2 LINE L2 2851 3313 0 1420 166 10 30 chr17 14108313 14108609 -75395944 - L1MB8 LINE L1 -5 6173 5884 2252 89 0 0 chr17 14108969 14109291 -75395262 + AluSx SINE Alu 1 322 0 214 239 28 28 chr17 14109814 14109885 -75394668 + L2 LINE L2 2447 2517 -797 205 303 37 37 chr17 14109892 14110001 -75394552 + MIR SINE MIR 80 188 -74 190 267 285 24 chr17 14110053 14110218 -75394335 + MIR SINE MIR 19 226 -36 534 332 81 14 chr17 14111776 14112059 -75392494 - L2 LINE L2 -75 3197 2896 214 381 102 0 chr17 14112147 14112323 -75392230 - L2 LINE L2 -568 2746 2553 462 269 72 0 chr17 14112574 14112741 -75391812 - L1M4 LINE L1 -1341 4805 4627 246 310 43 0 chr17 14112788 14112904 -75391649 + HAL1 LINE L1 1646 1766 -741 504 241 45 0 chr17 14113367 14113500 -75391053 - MIR SINE MIR -60 202 64 334 307 12 60 chr17 14113626 14113792 -75390761 + HAL1b LINE L1 754 911 -437 380 235 62 67 chr17 14114003 14114182 -75390371 - MER5B DNA MER1_type 0 178 1 1768 62 0 0 chr17 14114202 14114412 -75390141 + AluY SINE Alu 1 210 -101 2047 126 36 7 chr17 14114595 14114897 -75389656 - AluSx SINE Alu -1 311 1 1761 68 106 0 chr17 14114919 14115156 -75389397 - AluY SINE Alu -11 300 39 189 426 40 0 chr17 14115881 14115982 -75388571 - MIR SINE MIR -110 152 48 2547 74 0 0 chr17 14116301 14116612 -75387941 - AluY SINE Alu 0 311 1 420 228 0 0 chr17 14116637 14116716 -75387837 + FRAM SINE Alu 66 144 -32 1292 183 8 24 chr17 14116939 14117185 -75387368 + AluJo SINE Alu 39 280 -32 689 186 0 7 chr17 14117191 14117336 -75387217 + GA-rich Low_complexity Low_complexity 1 144 0 2306 249 74 30 chr17 14119480 14120234 -75384319 - MER21B LTR ERV1 -58 805 19 373 220 18 46 chr17 14120232 14120341 -75384212 - MER21B LTR ERV1 -757 106 1 * 2012 97 24 14 chr17 14120515 14120805 -75383748 - AluSq SINE Alu -20 293 1 22 0 0 0 chr17 14120807 14120829 -75383724 + AT_rich Low_complexity Low_complexity 1 22 0 460 345 45 42 chr17 14120860 14121307 -75383246 + HAL1b LINE L1 381 802 -546 2378 86 0 0 chr17 14121804 14122096 -75382457 + AluSx SINE Alu 1 292 -20 326 331 83 0 chr17 14122120 14122374 -75382179 + L1MEc LINE L1 1538 1812 -4584 429 210 74 40 chr17 14122393 14122569 -75381984 + L1MEc LINE L1 1909 2090 -4306 * 1296 248 146 6 chr17 14122557 14123182 -75381371 + L1MEc LINE L1 3194 3905 -2310 1231 105 0 0 chr17 14123732 14123904 -75380649 - AluSc SINE Alu -17 292 121 225 0 0 0 chr17 14123905 14123930 -75380623 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2054 97 0 53 chr17 14123930 14124230 -75380323 - AluSp SINE Alu -29 284 1 3608 188 143 116 chr17 14124326 14124847 -75379706 - L1MD3 LINE L1 -3 7992 7486 583 217 8 0 chr17 14124847 14124967 -75379586 - MLT1F1 LTR MaLR -442 125 5 3608 188 143 116 chr17 14124967 14125892 -75378661 - L1MD3 LINE L1 -509 7486 6385 346 252 105 59 chr17 14126011 14126249 -75378304 - HAL1b LINE L1 -872 476 228 2361 92 13 0 chr17 14126340 14126646 -75377907 + AluSx SINE Alu 1 310 -2 304 189 144 0 chr17 14127713 14127803 -75376750 + MIR SINE MIR 27 129 -133 294 369 81 6 chr17 14128117 14128277 -75376276 - MIR3 SINE MIR -21 187 16 291 368 66 9 chr17 14128887 14129099 -75375454 - MLT1K LTR MaLR -224 364 141 2213 92 0 41 chr17 14129461 14129636 -75374917 - AluSx SINE Alu -9 303 145 2383 66 0 3 chr17 14129636 14129924 -75374629 - AluY SINE Alu -16 295 9 2213 92 0 41 chr17 14129924 14130064 -75374489 - AluSx SINE Alu -167 145 1 217 276 17 0 chr17 14130388 14130446 -75374107 + MIR3 SINE MIR 126 184 -24 257 225 88 61 chr17 14131531 14131646 -75372907 + MIR SINE MIR 19 151 -57 721 229 93 35 chr17 14132331 14132577 -75371976 - MIR SINE MIR -12 250 10 586 256 156 74 chr17 14132811 14132864 -75371689 - MLT1L LTR MaLR -77 538 491 2163 126 0 0 chr17 14132864 14133188 -75371365 - AluSq SINE Alu 0 324 1 586 256 156 74 chr17 14133188 14133512 -75371041 - MLT1L LTR MaLR -124 491 129 234 0 0 0 chr17 14133723 14133749 -75370804 + (CA)n Simple_repeat Simple_repeat 2 27 0 198 196 39 20 chr17 14133804 14133855 -75370698 + MIR SINE MIR 96 147 -115 207 174 0 43 chr17 14133855 14133901 -75370652 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 2527 55 0 3 chr17 14134181 14134492 -75370061 + AluY SINE Alu 1 310 -1 2510 71 0 3 chr17 14135678 14135988 -75368565 - AluSc SINE Alu 0 309 1 180 0 0 0 chr17 14135993 14136013 -75368540 + (T)n Simple_repeat Simple_repeat 1 20 0 186 325 62 25 chr17 14136645 14136725 -75367828 - MIR SINE MIR -90 118 36 694 286 188 14 chr17 14137125 14137711 -75366842 - L2 LINE L2 -3 3310 2614 302 345 36 36 chr17 14138002 14138196 -75366357 - L1ME LINE L1 -394 5727 5534 22 35 0 0 chr17 14138299 14138328 -75366225 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr17 14138625 14138646 -75365907 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 187 397 43 0 chr17 14138744 14138860 -75365693 - L2 LINE L2 -16 3256 3136 545 236 74 83 chr17 14139110 14139326 -75365227 + MER58C DNA MER1_type 1 214 -1 431 180 328 32 chr17 14141527 14141716 -75362837 - MLT1G LTR MaLR -24 566 322 323 241 96 24 chr17 14141799 14141882 -75362671 - MLT1G LTR MaLR -381 168 80 410 175 25 0 chr17 14141953 14142033 -75362520 + MER31B LTR ERV1 1 82 -384 2424 230 38 44 chr17 14142033 14142698 -75361855 + MER67B LTR ERV1 1 661 0 525 352 146 12 chr17 14142699 14143193 -75361360 - L2 LINE L2 -700 2614 2055 198 246 119 32 chr17 14143290 14143416 -75361137 - L2 LINE L2 -1883 1431 1295 2178 99 3 40 chr17 14144791 14145114 -75359439 + AluY SINE Alu 1 311 0 234 62 0 0 chr17 14145121 14145153 -75359400 + (TA)n Simple_repeat Simple_repeat 2 33 0 1563 63 0 0 chr17 14145157 14145347 -75359206 - L1P4 LINE L1 -456 5712 5523 240 163 0 0 chr17 14145348 14145391 -75359162 + (TA)n Simple_repeat Simple_repeat 1 43 0 301 286 55 0 chr17 14145397 14145488 -75359065 + L1MC4 LINE L1 6607 6702 -1340 2239 92 0 10 chr17 14145718 14146010 -75358543 + AluSc SINE Alu 1 289 -20 406 295 6 60 chr17 14146071 14146237 -75358316 - MIR SINE MIR -2 260 104 202 283 11 144 chr17 14146405 14146592 -75357961 - L2 LINE L2 -186 3086 2925 552 237 71 12 chr17 14146625 14146794 -75357759 - MER104 DNA MER2_type -1 179 1 2152 107 21 3 chr17 14146820 14147109 -75357444 - AluSq SINE Alu -19 294 1 1914 110 4 18 chr17 14147374 14147646 -75356907 - L1PA10 LINE L1 0 6168 5901 2892 53 68 35 chr17 14147646 14147689 -75356864 + L1PA10 LINE L1 5451 5491 -677 2040 127 7 0 chr17 14147689 14147980 -75356573 + AluSx SINE Alu 3 295 -17 2892 53 68 35 chr17 14147980 14148332 -75356221 + L1PA10 LINE L1 5491 5859 -309 308 227 43 43 chr17 14148332 14148473 -75356080 - MER113 DNA MER1_type? -349 172 32 213 313 10 10 chr17 14148499 14148598 -75355955 - L2 LINE L2 -1052 2262 2164 192 191 0 24 chr17 14148944 14148986 -75355567 - L2 LINE L2 -6 3307 3267 584 215 6 0 chr17 14149701 14149864 -75354689 + (TAGA)n Simple_repeat Simple_repeat 2 165 0 195 290 29 0 chr17 14149960 14150029 -75354524 + MIR SINE MIR 79 149 -113 328 313 124 39 chr17 14150071 14150304 -75354249 - MIR SINE MIR 0 262 10 584 113 0 0 chr17 14150895 14150975 -75353578 + MADE1 DNA Mariner 1 80 0 237 132 0 0 chr17 14151211 14151249 -75353304 + (TATG)n Simple_repeat Simple_repeat 3 40 0 2255 94 6 38 chr17 14151427 14151746 -75352807 - AluSp SINE Alu -4 309 1 372 273 68 37 chr17 14153229 14153390 -75351163 - MIR SINE MIR -89 173 8 1792 172 48 12 chr17 14153896 14154228 -75350325 - MER7A DNA MER2_type -3 343 2 258 376 106 35 chr17 14154231 14154486 -75350067 + L2 LINE L2 2999 3271 -1 641 280 95 13 chr17 14155201 14155436 -75349117 - MIR SINE MIR 0 262 5 2434 80 3 6 chr17 14155579 14155891 -75348662 + AluY SINE Alu 1 311 0 180 154 0 0 chr17 14156625 14156651 -75347902 - L3b LINE CR1 -264 1319 1294 309 290 122 19 chr17 14157886 14157993 -75346560 + MIR SINE MIR 6 123 -139 21 71 0 0 chr17 14158769 14158811 -75345742 + AT_rich Low_complexity Low_complexity 1 42 0 2282 108 0 3 chr17 14159101 14159407 -75345146 + AluSx SINE Alu 1 305 -7 711 179 16 65 chr17 14159714 14159898 -75344655 + MER53 DNA DNA 1 175 -14 994 87 0 16 chr17 14160600 14160726 -75343827 - AluSq/x SINE Alu -189 124 1 27 0 0 0 chr17 14160727 14160754 -75343799 + AT_rich Low_complexity Low_complexity 1 27 0 209 254 51 0 chr17 14162861 14162920 -75341633 + L3 LINE CR1 1516 1577 0 524 143 0 11 chr17 14163482 14163573 -75340980 - L1MA3 LINE L1 0 6305 6216 300 268 37 0 chr17 14163588 14163670 -75340883 - MIR SINE MIR -108 154 70 2289 80 23 7 chr17 14163923 14164225 -75340328 - AluY SINE Alu -4 307 1 291 28 0 0 chr17 14164416 14164452 -75340101 + (TG)n Simple_repeat Simple_repeat 1 36 0 1239 216 79 16 chr17 14164600 14164905 -75339648 + MER2 DNA MER2_type 22 345 0 250 300 112 58 chr17 14165059 14165372 -75339181 - L1MC/D LINE L1 -2150 5658 5329 5243 235 90 10 chr17 14165517 14167712 -75336841 - L1ME3 LINE L1 -2 6160 3690 370 225 44 131 chr17 14167721 14167756 -75336797 + LTR41 LTR ERVL 549 585 -188 324 48 0 0 chr17 14167756 14167798 -75336755 + (TG)n Simple_repeat Simple_repeat 2 43 0 370 225 44 131 chr17 14167798 14167922 -75336631 + LTR41 LTR ERVL 585 694 -79 743 246 11 6 chr17 14168154 14168329 -75336224 - MER58A DNA MER1_type -12 212 37 2350 84 3 0 chr17 14168649 14168946 -75335607 - AluSp SINE Alu -15 298 1 480 266 130 16 chr17 14168971 14169155 -75335398 + MIR SINE MIR 7 211 -51 22 0 0 0 chr17 14169235 14169257 -75335296 + AT_rich Low_complexity Low_complexity 1 22 0 361 193 53 70 chr17 14169683 14169696 -75334857 - L1MC4 LINE L1 -124 7918 7906 396 0 0 0 chr17 14169696 14169740 -75334813 + (CTATT)n Simple_repeat Simple_repeat 1 44 0 361 193 53 70 chr17 14169740 14169840 -75334713 - L1MC4 LINE L1 -136 7906 7807 2297 64 0 3 chr17 14169841 14170159 -75334394 + AluY SINE Alu 1 317 0 675 167 54 40 chr17 14170167 14170348 -75334205 - MER31B LTR ERV1 -250 235 7 2296 106 0 3 chr17 14170414 14170725 -75333828 + AluSg SINE Alu 1 310 0 1350 198 156 70 chr17 14171976 14172405 -75332148 - MER31B LTR ERV1 0 466 1 271 309 29 51 chr17 14172675 14172850 -75331703 - MLT1K LTR MaLR -6 582 412 2491 61 3 0 chr17 14173236 14173533 -75331020 + AluY SINE Alu 1 298 -13 2444 80 0 0 chr17 14174087 14174388 -75330165 + AluY SINE Alu 1 301 -10 2007 192 14 11 chr17 14176251 14176610 -75327943 + MLT1A1 LTR MaLR 4 363 -2 772 227 23 0 chr17 14177871 14178047 -75326506 + MER5A DNA MER1_type 7 186 -3 181 316 0 51 chr17 14178098 14178177 -75326376 + L2 LINE L2 3198 3272 0 238 295 36 86 chr17 14178216 14178355 -75326198 - MER5A DNA MER1_type -2 187 56 312 48 0 0 chr17 14178682 14178724 -75325829 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1738 139 15 7 chr17 14178735 14179009 -75325544 - AluJb SINE Alu -36 276 1 250 200 148 17 chr17 14181476 14181591 -75322962 - MER113 DNA MER1_type? -349 172 43 3484 200 24 48 chr17 14181930 14182110 -75322443 + L1MB8 LINE L1 5145 5328 -850 2144 138 0 0 chr17 14182110 14182414 -75322139 + AluSx SINE Alu 3 306 -6 3484 200 24 48 chr17 14182414 14183277 -75321276 + L1MB8 LINE L1 5328 6178 0 6136 129 14 9 chr17 14183516 14185009 -75319544 + L1PB1 LINE L1 4667 6170 0 234 377 74 0 chr17 14185145 14185267 -75319286 + L2 LINE L2 3137 3267 -5 2153 129 126 0 chr17 14186224 14186604 -75317949 + MSTA LTR MaLR 1 428 0 3246 178 32 16 chr17 14186633 14187312 -75317241 - L1MB5 LINE L1 -9 6165 5476 409 121 0 30 chr17 14187344 14187410 -75317143 - L1PA8A LINE L1 -6 6125 6062 1591 65 0 0 chr17 14187410 14187625 -75316928 + L1PA8A LINE L1 5845 6059 -72 1391 187 70 6 chr17 14187622 14188108 -75316445 - L1MB5 LINE L1 -709 5471 4961 * 2430 229 18 42 chr17 14188111 14188890 -75315663 - L1MB5 LINE L1 -1616 4530 3771 1649 108 0 0 chr17 14189132 14189344 -75315209 + AluSq SINE Alu 1 212 -101 384 232 33 93 chr17 14189541 14189692 -75314861 - MLT1G LTR MaLR -7 583 442 966 303 22 38 chr17 14191352 14191801 -75312752 + LTR16B LTR ERVL 23 464 0 253 313 12 12 chr17 14192499 14192579 -75311974 + MIR SINE MIR 58 137 -71 217 227 0 0 chr17 14194384 14194428 -75310125 + (CA)n Simple_repeat Simple_repeat 2 45 0 182 302 93 47 chr17 14194489 14194618 -75309935 - L2 LINE L2 0 3313 3179 467 279 0 62 chr17 14196304 14196465 -75308088 + MER63A DNA MER1_type 60 210 0 1985 148 48 31 chr17 14196871 14197229 -75307324 + THE1B LTR MaLR 1 364 0 2281 79 4 0 chr17 14198098 14198397 -75306156 + AluSp SINE Alu 6 305 0 232 190 152 25 chr17 14198961 14199040 -75305513 + MIR SINE MIR 164 252 -10 479 360 50 4 chr17 14199114 14199356 -75305197 + MIR SINE MIR 2 254 -8 364 150 0 83 chr17 14200087 14200280 -75304273 + (TA)n Simple_repeat Simple_repeat 2 178 0 542 155 0 64 chr17 14200319 14200506 -75304047 + (TA)n Simple_repeat Simple_repeat 2 176 0 328 195 0 77 chr17 14200543 14200738 -75303815 + (TA)n Simple_repeat Simple_repeat 1 180 0 310 181 0 106 chr17 14200778 14200977 -75303576 + (TA)n Simple_repeat Simple_repeat 1 178 0 358 151 0 80 chr17 14200982 14201273 -75303280 + (TATATG)n Simple_repeat Simple_repeat 1 267 0 319 204 0 68 chr17 14201281 14201472 -75303081 + (TA)n Simple_repeat Simple_repeat 1 178 0 547 158 0 86 chr17 14201514 14201915 -75302638 + (TA)n Simple_repeat Simple_repeat 1 366 0 520 131 0 106 chr17 14201952 14202151 -75302402 + (TA)n Simple_repeat Simple_repeat 1 178 0 619 177 0 32 chr17 14202187 14202373 -75302180 + (TA)n Simple_repeat Simple_repeat 1 180 0 2614 55 0 0 chr17 14203305 14203616 -75300937 + AluY SINE Alu 1 311 0 2099 130 3 0 chr17 14203864 14204149 -75300404 - AluSx SINE Alu -21 291 6 231 336 112 15 chr17 14207761 14207895 -75296658 - MIR SINE MIR 0 262 116 306 363 0 0 chr17 14208118 14208264 -75296289 + MER117 DNA MER1_type 1 146 -51 1947 164 73 168 chr17 14208553 14209356 -75295197 + LTR8A LTR ERV1 1 727 0 222 62 0 0 chr17 14209579 14209611 -75294942 + (TG)n Simple_repeat Simple_repeat 2 33 0 255 286 26 0 chr17 14210272 14210349 -75294204 - MIR3 SINE MIR -6 202 124 1510 211 76 110 chr17 14210350 14210904 -75293649 + MLT1E LTR MaLR 1 535 -58 1669 246 47 11 chr17 14211027 14211475 -75293078 + MLT1C LTR MaLR 1 464 -3 258 136 0 0 chr17 14211596 14211640 -75292913 + (GA)n Simple_repeat Simple_repeat 1 44 0 1024 221 64 15 chr17 14211845 14212348 -75292205 + L1MEc LINE L1 2101 2587 -3628 325 283 28 14 chr17 14212346 14212491 -75292062 + L1MA10 LINE L1 6180 6326 -8 * 2053 153 129 0 chr17 14212630 14213009 -75291544 + MSTA LTR MaLR 1 428 0 7899 173 34 36 chr17 14213011 14214593 -75289960 + MSTA-int LTR MaLR 3 1580 0 2190 152 123 0 chr17 14214593 14214974 -75289579 + MSTA LTR MaLR 1 428 0 21 89 0 0 chr17 14215006 14215062 -75289491 + AT_rich Low_complexity Low_complexity 1 56 0 304 289 133 16 chr17 14216869 14216997 -75287556 - MIR3 SINE MIR -21 187 45 1807 220 0 8 chr17 14217206 14217574 -75286979 + MLT1A1 LTR MaLR 1 365 0 791 217 111 24 chr17 14217869 14218076 -75286477 - MIR SINE MIR -26 236 12 1866 182 3 3 chr17 14218457 14218759 -75285794 + AluJb SINE Alu 1 302 -10 2338 95 0 3 chr17 14218826 14219130 -75285423 + AluSq SINE Alu 1 303 -10 336 261 59 8 chr17 14219173 14219292 -75285261 - MER69A DNA AcHobo -26 151 27 1159 142 75 12 chr17 14219976 14220216 -75284337 + L1MB3 LINE L1 5929 6183 0 488 142 26 9 chr17 14221348 14221360 -75283193 + (TA)n Simple_repeat Simple_repeat 2 12 -104 1958 123 11 7 chr17 14221360 14221644 -75282909 + AluSx SINE Alu 1 285 -27 488 142 26 9 chr17 14221644 14221744 -75282809 + (TA)n Simple_repeat Simple_repeat 12 116 0 2453 79 13 0 chr17 14222608 14222911 -75281642 + AluY SINE Alu 1 307 -4 817 78 66 6 chr17 14225400 14225567 -75278986 + GA-rich Low_complexity Low_complexity 2 178 0 647 250 61 25 chr17 14225729 14225925 -75278628 - MER20 DNA MER1_type -16 203 1 200 373 0 13 chr17 14226253 14226328 -75278225 + L3 LINE CR1 1497 1570 -7 324 218 0 26 chr17 14228456 14228534 -75276019 + MIR SINE MIR 86 161 -101 34 42 0 0 chr17 14229013 14229061 -75275492 + AT_rich Low_complexity Low_complexity 1 48 0 578 281 51 18 chr17 14229746 14229963 -75274590 + MIR SINE MIR 17 240 -22 372 263 53 74 chr17 14230867 14231057 -75273496 - L1MC5 LINE L1 -48 7913 7728 3863 154 16 3 chr17 14231150 14231791 -75272762 + MER39B LTR ERV1 4 652 -1 493 68 96 0 chr17 14233123 14233196 -75271357 + MADE1 DNA Mariner 1 80 0 295 70 0 0 chr17 14233197 14233240 -75271313 + MADE1 DNA Mariner 38 80 0 230 351 77 51 chr17 14233513 14233708 -75270845 + L3b LINE CR1 1114 1303 -280 2305 161 54 2 chr17 14233708 14234131 -75270422 + L1MB2 LINE L1 5712 6156 -15 596 149 52 45 chr17 14234131 14234257 -75270296 + L1MB2 LINE L1 6037 6171 0 230 351 77 51 chr17 14234257 14234373 -75270180 + L3b LINE CR1 1302 1434 -149 2265 99 13 0 chr17 14235765 14236068 -75268485 + AluSc SINE Alu 1 307 -2 1563 122 15 4 chr17 14236184 14236447 -75268106 + L1MA5 LINE L1 6035 6300 0 1749 268 82 15 chr17 14236471 14236899 -75267654 + L1ME3A LINE L1 5373 5874 -296 2110 109 3 17 chr17 14236899 14237201 -75267352 + AluSg SINE Alu 1 298 -12 1749 268 82 15 chr17 14237201 14237515 -75267038 + L1ME3A LINE L1 5874 6165 -5 269 235 35 47 chr17 14237892 14237977 -75266576 - MIR SINE MIR -95 167 84 2392 76 3 13 chr17 14238610 14238913 -75265640 + AluSg SINE Alu 1 300 -10 21 0 0 0 chr17 14238945 14238966 -75265587 + AT_rich Low_complexity Low_complexity 1 21 0 493 321 74 0 chr17 14239084 14239246 -75265307 + MIR3 SINE MIR 23 196 -12 2041 94 6 44 chr17 14239641 14239961 -75264592 + AluSx SINE Alu 1 308 -4 520 262 71 27 chr17 14240124 14240317 -75264236 - MIR SINE MIR -60 148 1 190 337 11 11 chr17 14241426 14241518 -75263035 + L2 LINE L2 2130 2221 -1093 230 232 0 110 chr17 14241805 14241887 -75262666 + MER96 DNA MER1_type? 103 175 0 236 176 0 20 chr17 14242133 14242184 -75262369 + HAL1 LINE L1 1633 1682 -825 211 184 40 40 chr17 14242452 14242528 -75262025 + GA-rich Low_complexity Low_complexity 1 76 0 456 344 59 27 chr17 14242590 14242776 -75261777 - MIR3 SINE MIR -14 194 3 1127 121 0 0 chr17 14243575 14243732 -75260821 - AluSg/x SINE Alu -16 296 140 2744 223 92 30 chr17 14243978 14244862 -75259691 + Zaphod DNA AcHobo 15 952 -3079 2270 8 0 0 chr17 14244947 14245194 -75259359 + AluYb8 SINE Alu 64 310 -8 881 191 6 0 chr17 14245195 14245368 -75259185 + L1MB5 LINE L1 5908 6081 -93 588 271 47 0 chr17 14245371 14245541 -75259012 + MER58A DNA MER1_type 47 224 0 1729 189 50 12 chr17 14245549 14245968 -75258585 + Zaphod DNA AcHobo 3595 4029 -2 312 316 92 9 chr17 14246302 14246637 -75257916 - L1ME4a LINE L1 -29 6092 5730 24 0 0 0 chr17 14246764 14246788 -75257765 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 14247244 14247265 -75257288 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 14247295 14247318 -75257235 + AT_rich Low_complexity Low_complexity 1 23 0 450 133 0 27 chr17 14247468 14247543 -75257010 + AluS SINE Alu 1 73 -245 273 227 136 45 chr17 14247577 14247687 -75256866 + L1ME1 LINE L1 5971 6090 -76 1967 136 7 0 chr17 14248040 14248326 -75256227 - AluSx SINE Alu -24 288 1 1937 215 47 41 chr17 14248348 14248895 -75255658 - L1MC/D LINE L1 -743 5403 5275 2026 114 0 4 chr17 14248895 14249207 -75255346 + AluSg SINE Alu 1 311 0 1937 215 47 41 chr17 14249207 14249423 -75255130 - L1MC/D LINE L1 -871 5275 5062 1580 69 0 0 chr17 14249664 14249852 -75254701 - AluY SINE Alu -123 188 1 301 336 108 42 chr17 14250144 14250358 -75254195 - L2 LINE L2 -5 3267 3040 2082 133 27 0 chr17 14250509 14250810 -75253743 - AluSx SINE Alu -3 309 1 483 317 57 54 chr17 14250988 14251322 -75253231 + L1MC4a LINE L1 5617 5951 -1857 851 254 144 74 chr17 14251370 14251842 -75252711 + MLT1H LTR MaLR 29 533 -16 233 261 45 11 chr17 14251876 14251964 -75252589 + L1ME4a LINE L1 5947 6037 -84 273 57 0 0 chr17 14252410 14252445 -75252108 + (ATG)n Simple_repeat Simple_repeat 2 36 0 253 289 117 23 chr17 14252849 14252977 -75251576 + MIR SINE MIR 50 189 -73 2064 113 11 11 chr17 14253469 14253751 -75250802 - AluSx SINE Alu -3 309 28 838 174 35 91 chr17 14254696 14254926 -75249627 - MER20 DNA MER1_type -2 217 1 266 196 49 84 chr17 14254927 14255070 -75249483 - MER112 DNA MER1_type -57 203 66 428 48 16 0 chr17 14255686 14255749 -75248804 + (CA)n Simple_repeat Simple_repeat 1 64 0 22 80 0 0 chr17 14256936 14256986 -75247567 + AT_rich Low_complexity Low_complexity 1 50 0 1700 143 44 0 chr17 14257139 14257412 -75247141 - AluJb SINE Alu -27 285 1 635 212 13 7 chr17 14257538 14257689 -75246864 + L1MD2 LINE L1 6191 6342 -17 387 330 36 36 chr17 14257715 14257909 -75246644 - L1M4 LINE L1 -3637 2509 2316 369 0 0 0 chr17 14259341 14259382 -75245171 + (TA)n Simple_repeat Simple_repeat 2 42 0 2479 72 3 19 chr17 14259501 14259819 -75244734 - AluSp SINE Alu 0 313 1 294 246 35 35 chr17 14261146 14261260 -75243293 + LTR16A LTR ERVL 1 114 -336 339 267 176 6 chr17 14261360 14261525 -75243028 + LTR16A LTR ERVL 247 439 -11 209 288 98 83 chr17 14261569 14261833 -75242720 - L2 LINE L2 -188 3084 2817 21 71 0 0 chr17 14262293 14262335 -75242218 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr17 14262872 14262906 -75241647 + (CA)n Simple_repeat Simple_repeat 2 35 0 441 311 68 6 chr17 14263226 14263403 -75241150 - MIR SINE MIR -56 206 19 189 0 0 0 chr17 14265773 14265794 -75238759 + (CA)n Simple_repeat Simple_repeat 2 22 0 240 290 48 81 chr17 14265858 14265982 -75238571 + MIR SINE MIR 88 207 -55 208 341 23 11 chr17 14266141 14266229 -75238324 - MIR SINE MIR -6 256 168 186 264 103 35 chr17 14267039 14267126 -75237427 + MIR SINE MIR 126 218 -44 2833 203 42 25 chr17 14267239 14267290 -75237263 + MER82 DNA MER2_type 1 50 -603 1591 158 0 79 chr17 14267290 14267606 -75236947 + AluJb SINE Alu 3 293 -19 2236 102 0 0 chr17 14267610 14267922 -75236631 + AluSp SINE Alu 1 312 0 2833 203 42 25 chr17 14267922 14268506 -75236047 + MER82 DNA MER2_type 52 653 0 585 230 5 97 chr17 14269583 14269779 -75234774 + MER45A DNA AcHobo 1 178 0 180 0 0 0 chr17 14269948 14269968 -75234585 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 909 272 139 25 chr17 14271726 14272164 -75232389 - MLT1H1 LTR MaLR -7 548 61 211 233 0 0 chr17 14273302 14273345 -75231208 + MIR3 SINE MIR 162 204 -4 1390 196 40 61 chr17 14274802 14274912 -75229641 + MLT1B LTR MaLR 5 116 -274 2059 139 3 7 chr17 14274912 14275214 -75229339 + AluSx SINE Alu 1 301 -11 1390 196 40 61 chr17 14275214 14275481 -75229072 + MLT1B LTR MaLR 116 374 -16 3264 192 52 28 chr17 14275518 14276233 -75228320 + MER21B LTR ERV1 19 750 -113 500 293 28 42 chr17 14276346 14276417 -75228136 + L3 LINE CR1 1207 1277 -300 653 50 0 0 chr17 14276417 14276497 -75228056 + MADE1 DNA Mariner 1 80 0 500 293 28 42 chr17 14276497 14276637 -75227916 + L3 LINE CR1 1277 1415 -162 246 280 160 0 chr17 14276749 14276849 -75227704 + MIR SINE MIR 13 128 -134 1881 123 7 18 chr17 14278585 14278861 -75225692 + AluSx SINE Alu 25 297 -15 2247 114 7 7 chr17 14279124 14279432 -75225121 - AluSc SINE Alu -1 308 1 281 173 77 0 chr17 14279646 14279698 -75224855 + L2 LINE L2 3216 3271 -1 311 290 100 0 chr17 14279766 14279866 -75224687 + MER103 DNA DNA 57 166 0 3091 218 56 22 chr17 14280090 14280802 -75223751 + MER21B LTR ERV1 21 756 -107 1457 237 31 20 chr17 14281003 14281357 -75223196 - MLT1A2 LTR MaLR -12 362 5 6614 84 11 2 chr17 14281474 14282293 -75222260 + LTR12 LTR ERV1 1 826 0 283 194 117 48 chr17 14282841 14282944 -75221609 + MER103 DNA DNA 2 111 -55 216 0 0 0 chr17 14283022 14283046 -75221507 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 897 256 104 42 chr17 14283111 14283497 -75221056 + MLT1J2 LTR MaLR 3 412 -38 368 224 55 91 chr17 14283502 14283574 -75220979 - MER96B DNA MER1_type? 0 417 344 261 0 0 0 chr17 14283574 14283603 -75220950 + (CAA)n Simple_repeat Simple_repeat 2 30 0 368 224 55 91 chr17 14283603 14283653 -75220900 - MER96B DNA MER1_type? -73 344 300 2361 71 3 0 chr17 14283653 14283949 -75220604 + AluY SINE Alu 1 297 -14 368 224 55 91 chr17 14283949 14283990 -75220563 - MER96B DNA MER1_type? -117 300 259 1631 104 0 9 chr17 14283992 14284270 -75220283 + AluSc SINE Alu 60 335 0 2396 88 0 10 chr17 14284940 14285247 -75219306 - AluSg SINE Alu -6 304 1 2255 76 0 3 chr17 14289092 14289424 -75215129 + AluY SINE Alu 1 331 0 2312 88 0 0 chr17 14289438 14289733 -75214820 + AluSg SINE Alu 1 295 -15 376 331 7 0 chr17 14290820 14290968 -75213585 + HAL1b LINE L1 381 529 -819 919 217 6 6 chr17 14290998 14291173 -75213380 + FAM SINE Alu 1 175 0 22 0 0 0 chr17 14291232 14291254 -75213299 + AT_rich Low_complexity Low_complexity 1 22 0 542 260 28 126 chr17 14291779 14292064 -75212489 + MIR SINE MIR 4 260 -2 321 177 30 67 chr17 14292311 14292475 -75212078 + (TTATA)n Simple_repeat Simple_repeat 2 159 0 261 0 0 0 chr17 14292682 14292711 -75211842 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 642 222 72 57 chr17 14292818 14292874 -75211679 - L1MC4 LINE L1 0 8042 7988 2462 80 3 0 chr17 14292874 14293185 -75211368 + AluSx SINE Alu 1 312 0 642 222 72 57 chr17 14293185 14293407 -75211146 - L1MC4 LINE L1 -54 7988 7760 521 294 17 28 chr17 14293909 14294089 -75210464 + MER5B DNA MER1_type 1 178 0 2091 124 0 23 chr17 14294252 14294558 -75209995 - AluSg SINE Alu -11 299 1 22 56 0 0 chr17 14296803 14296839 -75207714 + AT_rich Low_complexity Low_complexity 1 36 0 1403 146 0 5 chr17 14297247 14297460 -75207093 + MER2 DNA MER2_type 1 212 -133 239 225 0 0 chr17 14297511 14297551 -75207002 + MER2 DNA MER2_type 296 335 -10 2167 130 7 7 chr17 14297578 14297886 -75206667 - AluSx SINE Alu -2 310 3 2074 119 19 19 chr17 14298122 14298434 -75206119 + AluJb SINE Alu 1 312 0 555 291 53 102 chr17 14298709 14298904 -75205649 - L1MEd LINE L1 -4967 1152 949 16099 125 28 15 chr17 14298904 14301290 -75203263 + Tigger1 DNA MER2_type 1 2418 0 555 291 53 102 chr17 14301290 14301964 -75202589 - L1MEd LINE L1 -5170 949 326 1502 190 44 3 chr17 14303341 14303636 -75200917 - AluJb SINE Alu -5 307 1 180 0 0 0 chr17 14303721 14303741 -75200812 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 410 312 53 32 chr17 14304050 14304239 -75200314 - MARNA DNA Mariner -358 228 36 1931 152 3 0 chr17 14304623 14304925 -75199628 - AluSx SINE Alu -9 303 1 232 354 69 8 chr17 14305094 14305224 -75199329 - MIR3 SINE MIR -38 170 33 271 256 22 44 chr17 14305598 14305688 -75198865 - L2 LINE L2 -8 3305 3218 1283 228 70 31 chr17 14306564 14306919 -75197634 + MLT1A2 LTR MaLR 5 373 -1 2076 96 64 3 chr17 14307001 14307283 -75197270 - AluSx SINE Alu -13 299 1 2259 109 0 0 chr17 14307303 14307607 -75196946 + AluY SINE Alu 1 304 -7 882 239 28 0 chr17 14308795 14308971 -75195582 + MER5A DNA MER1_type 9 189 0 1539 250 109 42 chr17 14308998 14309522 -75195031 - MLT1F1 LTR MaLR -8 559 1 2848 118 0 0 chr17 14309762 14310126 -75194427 - THE1B LTR MaLR 0 364 1 273 340 26 26 chr17 14310461 14310614 -75193939 - MIR3 SINE MIR -5 203 51 198 0 0 0 chr17 14310734 14310756 -75193797 + (TG)n Simple_repeat Simple_repeat 2 23 0 841 288 39 10 chr17 14310798 14311104 -75193449 + L1ME4a LINE L1 5513 5827 -294 2060 104 3 50 chr17 14311132 14311449 -75193104 + AluSx SINE Alu 1 302 -10 210 328 78 0 chr17 14311526 14311590 -75192963 + L2 LINE L2 3204 3272 0 21 0 0 0 chr17 14311875 14311896 -75192657 + AT_rich Low_complexity Low_complexity 1 21 0 534 236 69 58 chr17 14312005 14312243 -75192310 + L1ME LINE L1 5505 5745 -376 2225 119 3 3 chr17 14312285 14312595 -75191958 + AluSx SINE Alu 1 310 -2 1211 103 139 5 chr17 14312646 14312840 -75191713 + AluSg/x SINE Alu 92 311 -1 270 104 0 119 chr17 14313313 14313380 -75191173 + L1MA7 LINE L1 6231 6289 -2 26 0 0 0 chr17 14313381 14313407 -75191146 + AT_rich Low_complexity Low_complexity 1 26 0 2282 103 7 0 chr17 14313477 14313779 -75190774 + AluSp SINE Alu 1 304 -9 23 0 0 0 chr17 14313962 14313985 -75190568 + AT_rich Low_complexity Low_complexity 1 23 0 1844 121 0 0 chr17 14314102 14314350 -75190203 + AluSx SINE Alu 52 299 -13 198 167 19 111 chr17 14314642 14314696 -75189857 + L3 LINE CR1 1523 1571 -6 989 98 0 7 chr17 14317318 14317471 -75187082 + (GGAA)n Simple_repeat Simple_repeat 4 155 0 2573 80 0 0 chr17 14318054 14318366 -75186187 - AluSx SINE Alu 0 312 1 216 303 184 53 chr17 14318645 14318707 -75185846 + L2 LINE L2 2336 2388 -926 2304 85 7 7 chr17 14318707 14319013 -75185540 - AluSc SINE Alu -3 306 1 216 303 184 53 chr17 14319013 14319330 -75185223 + L2 LINE L2 2388 2765 -549 1308 196 21 55 chr17 14319351 14319452 -75185101 + MER33 DNA MER1_type 10 113 -2472 2485 58 0 10 chr17 14319452 14319764 -75184789 + AluY SINE Alu 1 309 -2 1308 196 21 55 chr17 14319764 14319988 -75184565 + MER33 DNA MER1_type 113 324 0 2352 90 0 0 chr17 14320040 14320330 -75184223 + AluSc SINE Alu 1 290 -19 954 205 74 33 chr17 14320947 14321162 -75183391 + MER58A DNA MER1_type 1 224 0 288 224 6 138 chr17 14321371 14321545 -75183008 + MER112 DNA MER1_type 8 158 -102 2012 62 82 4 chr17 14321556 14321813 -75182740 - AluY SINE Alu -18 293 17 350 264 120 0 chr17 14322064 14322189 -75182364 + Charlie8 DNA MER1_type 127 266 -2151 204 40 0 0 chr17 14322533 14322558 -75181995 + (CA)n Simple_repeat Simple_repeat 2 26 0 2156 125 3 3 chr17 14323901 14324213 -75180340 - AluSx SINE Alu 0 312 1 2155 135 0 3 chr17 14324515 14324826 -75179727 - AluSx SINE Alu -2 310 1 420 248 44 24 chr17 14325024 14325158 -75179395 + MIR SINE MIR 26 162 -65 180 0 0 0 chr17 14326100 14326120 -75178433 + (A)n Simple_repeat Simple_repeat 1 20 0 2196 200 52 40 chr17 14326573 14327148 -75177405 - L1MD3 LINE L1 -11 7984 7403 279 0 0 0 chr17 14328713 14328744 -75175809 + (TTG)n Simple_repeat Simple_repeat 1 31 0 279 0 0 0 chr17 14329285 14329316 -75175237 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 283 0 0 chr17 14330056 14330109 -75174444 + (TA)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr17 14333680 14333704 -75170849 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr17 14334703 14334723 -75169830 + (GGCTG)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr17 14335603 14335626 -75168927 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr17 14335697 14335727 -75168826 + (TG)n Simple_repeat Simple_repeat 1 30 0 211 172 259 0 chr17 14336597 14336655 -75167898 + MIR3 SINE MIR 118 190 -18 1295 162 14 22 chr17 14336847 14337069 -75167484 - AluJb SINE Alu -12 300 81 1036 187 66 19 chr17 14337076 14337333 -75167220 - MER33 DNA MER1_type -54 270 2 423 289 144 26 chr17 14337361 14337555 -75166998 - LTR33 LTR ERVL 0 521 305 330 146 0 0 chr17 14337952 14338007 -75166546 - MLT2B2 LTR ERVL -2 513 459 2324 182 69 52 chr17 14338031 14338337 -75166216 - MLT2B3 LTR ERVL -22 532 212 2325 104 0 0 chr17 14338337 14338635 -75165918 + AluSx SINE Alu 1 298 -14 2324 182 69 52 chr17 14338635 14338851 -75165702 - MLT2B3 LTR ERVL -342 212 1 285 243 18 45 chr17 14339622 14339733 -75164820 - LTR33 LTR ERVL -338 183 76 2412 93 3 0 chr17 14339930 14340240 -75164313 - AluSp SINE Alu -2 311 1 301 285 96 105 chr17 14340263 14340596 -75163957 + L2 LINE L2 2938 3267 -5 2017 113 39 0 chr17 14340655 14340939 -75163614 + AluSp SINE Alu 6 300 -13 2326 95 20 0 chr17 14341452 14341756 -75162797 + AluSg SINE Alu 1 310 0 240 111 0 0 chr17 14342163 14342199 -75162354 + (A)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr17 14342325 14342355 -75162198 + AT_rich Low_complexity Low_complexity 1 30 0 445 291 16 8 chr17 14342420 14342547 -75162006 + MER91B DNA MER1_type 50 177 -13 760 302 178 10 chr17 14342686 14343103 -75161450 + MLT1K LTR MaLR 40 526 -62 1873 176 0 0 chr17 14343172 14343478 -75161075 - AluJb SINE Alu -6 306 1 1044 113 0 0 chr17 14343545 14343686 -75160867 - AluY SINE Alu -9 302 162 182 390 55 20 chr17 14344340 14344540 -75160013 - L2 LINE L2 -657 2657 2451 482 191 162 7 chr17 14345350 14345486 -75159067 - MER103 DNA DNA -7 159 3 1738 225 69 29 chr17 14348284 14348733 -75155820 - MLT1C LTR MaLR 0 467 1 2222 87 3 7 chr17 14348779 14349095 -75155458 + AluSp SINE Alu 1 315 0 620 308 44 24 chr17 14349120 14349370 -75155183 - MIR SINE MIR 0 262 8 1258 225 25 74 chr17 14349933 14350257 -75154296 + AluJb SINE Alu 1 308 -4 1239 201 146 17 chr17 14350709 14350997 -75153556 + MLT1A2 LTR MaLR 3 327 -47 676 316 110 51 chr17 14351015 14351941 -75152612 - L1M4 LINE L1 -1451 4695 3715 263 275 12 12 chr17 14352716 14352796 -75151757 - MER116 DNA Mariner 0 80 1 543 278 96 13 chr17 14353416 14353741 -75150812 + L1MC4a LINE L1 5563 5778 -343 710 83 0 0 chr17 14353834 14353947 -75150606 - AluSp/q SINE Alu 0 313 201 304 353 38 50 chr17 14354257 14354495 -75150058 - L1M4 LINE L1 -2967 3179 2945 387 286 29 14 chr17 14354496 14354636 -75149917 - MIR SINE MIR -5 257 116 942 305 59 53 chr17 14354639 14355144 -75149409 + MLT1K LTR MaLR 71 578 -10 256 238 0 16 chr17 14355255 14355318 -75149235 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1243 296 65 100 chr17 14355415 14355952 -75148601 - L2 LINE L2 -566 2748 2193 2017 161 0 0 chr17 14355952 14356256 -75148297 - AluSx SINE Alu -8 304 1 1243 296 65 100 chr17 14356256 14356396 -75148157 - L2 LINE L2 -1121 2193 2050 1211 178 73 128 chr17 14356396 14356638 -75147915 - MLT1A1 LTR MaLR 0 365 150 1471 94 13 73 chr17 14356638 14356871 -75147682 - AluSc SINE Alu -16 293 75 1211 178 73 128 chr17 14356871 14357011 -75147542 - MLT1A1 LTR MaLR -215 150 4 1243 296 65 100 chr17 14357011 14357432 -75147121 - L2 LINE L2 -1264 2050 1688 2250 163 75 2 chr17 14357541 14357941 -75146612 - LTR47A LTR ERVL -23 429 1 279 290 173 43 chr17 14357941 14358103 -75146450 - L2 LINE L2 -1725 1589 1407 194 360 79 14 chr17 14358082 14358221 -75146332 + L2 LINE L2 833 980 -2334 * 449 307 113 65 chr17 14358270 14358628 -75145925 - L2 LINE L2 -1944 1370 990 2317 90 0 28 chr17 14358628 14358950 -75145603 + AluSq SINE Alu 1 313 0 449 307 113 65 chr17 14358950 14358988 -75145565 - L2 LINE L2 -2324 990 955 2482 84 0 0 chr17 14359127 14359436 -75145117 - AluSx SINE Alu -2 310 2 482 210 84 118 chr17 14359437 14359675 -75144878 + MER112 DNA MER1_type 29 258 -2 375 276 24 16 chr17 14359677 14359800 -75144753 - L2 LINE L2 -2511 803 680 243 150 0 0 chr17 14359836 14359876 -75144677 - MER3 DNA MER1_type -14 195 156 1526 215 109 36 chr17 14359885 14360415 -75144138 - L1ME1 LINE L1 -4 6162 5594 557 239 182 0 chr17 14360916 14361075 -75143478 - MER5A DNA MER1_type -1 188 1 232 274 137 29 chr17 14361100 14361202 -75143351 + MIR SINE MIR 47 159 -103 2466 86 0 0 chr17 14361210 14361512 -75143041 + AluSc SINE Alu 1 302 -7 342 115 0 0 chr17 14361512 14361564 -75142989 + (TA)n Simple_repeat Simple_repeat 2 53 0 2029 125 7 33 chr17 14362220 14362525 -75142028 + AluSx SINE Alu 1 297 -15 201 74 0 0 chr17 14362607 14362634 -75141919 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2310 89 0 10 chr17 14362712 14363015 -75141538 + AluSg SINE Alu 1 300 -10 1981 161 49 122 chr17 14363134 14363523 -75141030 + LTR32 LTR ERVL 15 362 -109 2811 63 0 0 chr17 14363523 14363857 -75140696 + L1PA5 LINE L1 5818 6151 -3 1981 161 49 122 chr17 14363857 14363957 -75140596 + LTR32 LTR ERVL 362 468 -3 275 320 79 28 chr17 14364026 14364204 -75140349 - MIR SINE MIR -14 248 62 288 252 61 87 chr17 14364975 14365054 -75139499 - MIR SINE MIR -55 207 130 2337 95 7 0 chr17 14365054 14365350 -75139203 + AluSc SINE Alu 1 298 -11 288 252 61 87 chr17 14365350 14365385 -75139168 - MIR SINE MIR -132 130 96 1921 90 83 21 chr17 14365917 14366207 -75138346 - AluSc SINE Alu 0 309 2 2395 77 0 0 chr17 14366487 14366784 -75137769 - AluY SINE Alu -14 297 1 2148 123 3 0 chr17 14367531 14367831 -75136722 + AluSp SINE Alu 1 301 -12 2009 121 7 4 chr17 14368177 14368458 -75136095 + AluSc SINE Alu 1 282 -27 414 0 0 0 chr17 14368458 14368504 -75136049 + (CA)n Simple_repeat Simple_repeat 2 47 0 358 256 37 26 chr17 14368573 14368743 -75135810 + HAL1b LINE L1 343 1597 -864 204 214 14 29 chr17 14368781 14368842 -75135711 + (TA)n Simple_repeat Simple_repeat 2 63 -7 2585 169 58 9 chr17 14368842 14369287 -75135266 - LTR24 LTR ERV1 0 467 1 204 214 14 29 chr17 14369287 14369295 -75135258 + (TA)n Simple_repeat Simple_repeat 63 70 0 32 0 0 0 chr17 14369368 14369400 -75135153 + AT_rich Low_complexity Low_complexity 1 32 0 228 163 0 0 chr17 14369630 14369673 -75134880 + A-rich Low_complexity Low_complexity 1 43 0 2593 173 86 49 chr17 14369724 14370314 -75134239 - LTR9 LTR ERV1 0 612 1 2169 109 26 0 chr17 14370531 14370833 -75133720 + AluSp SINE Alu 3 312 -1 22 35 0 0 chr17 14370936 14370965 -75133588 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr17 14371344 14371386 -75133167 + AT_rich Low_complexity Low_complexity 1 42 0 752 258 26 82 chr17 14371644 14371847 -75132706 + MIR SINE MIR 10 196 -66 4422 129 9 5 chr17 14371847 14372477 -75132076 + MER41B LTR ERV1 3 635 0 752 258 26 82 chr17 14372477 14372541 -75132012 + MIR SINE MIR 196 262 0 21 36 0 0 chr17 14373055 14373083 -75131470 + AT_rich Low_complexity Low_complexity 1 28 0 1822 198 101 60 chr17 14373316 14373983 -75130570 + LTR48 LTR ERV1 3 644 0 246 32 0 0 chr17 14374367 14374398 -75130155 + (TG)n Simple_repeat Simple_repeat 2 32 0 339 207 37 24 chr17 14375042 14375124 -75129429 + MER5A DNA MER1_type 86 168 -21 762 183 39 0 chr17 14376739 14376892 -75127661 + MER5A DNA MER1_type 3 161 -28 613 208 57 0 chr17 14377016 14377122 -75127431 + MER81 DNA DNA 3 114 0 1783 90 113 19 chr17 14377360 14377644 -75126909 + AluSc SINE Alu 1 308 0 552 299 116 9 chr17 14378306 14378530 -75126023 + MIR SINE MIR 5 252 -10 219 334 32 60 chr17 14379392 14379547 -75125006 - MIR SINE MIR -79 183 35 275 231 0 0 chr17 14379763 14379815 -75124738 - MIR SINE MIR 0 262 211 969 164 7 0 chr17 14379830 14379982 -75124571 + FRAM SINE Alu 2 154 -22 259 224 121 5 chr17 14380021 14380123 -75124430 - MIR SINE MIR -47 161 52 1394 218 44 44 chr17 14381633 14381902 -75122651 - MLT1B LTR MaLR 0 390 119 1919 171 0 0 chr17 14381902 14382200 -75122353 - AluJb SINE Alu -12 300 3 1394 218 44 44 chr17 14382200 14382320 -75122233 - MLT1B LTR MaLR -270 120 1 192 315 22 0 chr17 14383188 14383277 -75121276 + MIR SINE MIR 30 120 -88 287 337 21 11 chr17 14383435 14383530 -75121023 - L2 LINE L2 -30 3242 3147 2095 258 62 33 chr17 14383672 14384682 -75119871 + L1ME3 LINE L1 5036 6083 -79 1246 117 36 109 chr17 14384682 14384751 -75119802 + MER30 DNA MER1_type 1 73 -157 1820 122 0 43 chr17 14384751 14385029 -75119524 + AluSg SINE Alu 31 296 -14 1246 117 36 109 chr17 14385029 14385207 -75119346 + MER30 DNA MER1_type 73 230 0 2095 258 62 33 chr17 14385207 14385259 -75119294 + L1ME3 LINE L1 6083 6132 -30 2459 66 0 3 chr17 14385364 14385666 -75118887 + AluY SINE Alu 4 304 -7 1719 178 57 9 chr17 14385781 14386113 -75118440 - MER7A DNA MER2_type 0 346 1 228 191 0 21 chr17 14386151 14386198 -75118355 + CT-rich Low_complexity Low_complexity 2 47 0 225 250 0 0 chr17 14386198 14386242 -75118311 - MER5B DNA MER1_type -134 44 1 634 311 56 15 chr17 14386476 14386743 -75117810 + MLT1F LTR MaLR 36 313 -229 22 56 0 0 chr17 14387187 14387223 -75117330 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr17 14387317 14387346 -75117207 + AT_rich Low_complexity Low_complexity 1 29 0 2518 149 49 8 chr17 14388058 14388528 -75116025 - L1MB3 LINE L1 -16 6167 5679 2558 133 26 14 chr17 14388734 14389155 -75115398 + MSTB LTR MaLR 1 426 0 237 250 22 11 chr17 14389731 14389823 -75114730 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 1073 247 84 77 chr17 14389926 14390380 -75114173 - L2 LINE L2 -32 3281 2825 335 104 0 0 chr17 14390481 14390529 -75114024 + MER74B LTR ERVL 1 48 -574 263 316 5 31 chr17 14391306 14391502 -75113051 + L1ME4a LINE L1 5830 6020 -101 * 2033 236 57 35 chr17 14391491 14391772 -75112781 + L1ME LINE L1 272 545 -5525 2337 78 3 16 chr17 14391772 14392081 -75112472 + AluY SINE Alu 3 307 -4 2033 236 57 35 chr17 14392081 14392540 -75112013 + L1ME LINE L1 545 1028 -5042 2239 107 0 0 chr17 14392599 14392899 -75111654 + AluSg SINE Alu 1 300 -10 302 179 164 8 chr17 14393096 14393230 -75111323 - L1ME LINE L1 -375 5746 5592 235 218 26 26 chr17 14393218 14393296 -75111257 - L1ME3A LINE L1 0 6170 6093 * 270 319 22 0 chr17 14393326 14393461 -75111092 - L1M4 LINE L1 -1481 4665 4528 412 180 16 0 chr17 14393461 14393583 -75110970 + (TA)n Simple_repeat Simple_repeat 2 125 0 1921 264 96 29 chr17 14393648 14394983 -75109570 - L1ME2 LINE L1 -3 6161 4744 738 192 14 70 chr17 14395148 14395362 -75109191 - L1MA9 LINE L1 -30 6282 6081 257 336 47 19 chr17 14395395 14395502 -75109051 + L2 LINE L2 3199 3308 -5 26 0 0 0 chr17 14395800 14395826 -75108727 + AT_rich Low_complexity Low_complexity 1 26 0 304 308 105 21 chr17 14395896 14396039 -75108514 + MIR3 SINE MIR 5 159 -49 235 300 15 15 chr17 14396855 14396948 -75107605 + (TA)n Simple_repeat Simple_repeat 1 96 -34 8988 102 16 12 chr17 14396948 14397297 -75107256 + HSMAR1 DNA Mariner 3 349 -938 2295 74 0 20 chr17 14397297 14397596 -75106957 + AluY SINE Alu 1 293 -18 8988 102 16 12 chr17 14397596 14398527 -75106026 + HSMAR1 DNA Mariner 349 1287 0 235 300 15 15 chr17 14398527 14398563 -75105990 + (TA)n Simple_repeat Simple_repeat 95 130 0 22 56 0 0 chr17 14398992 14399028 -75105525 + AT_rich Low_complexity Low_complexity 1 36 0 1703 146 60 27 chr17 14399114 14399483 -75105070 - SVA Other Other -573 813 433 27 0 0 0 chr17 14399559 14399586 -75104967 + AT_rich Low_complexity Low_complexity 1 27 0 279 0 0 0 chr17 14399609 14399640 -75104913 + (GA)n Simple_repeat Simple_repeat 2 32 0 2093 112 0 0 chr17 14399641 14399918 -75104635 - AluSx SINE Alu -35 277 1 12694 192 50 46 chr17 14400199 14403090 -75101463 + L1M2 LINE L1 1 2902 -3947 4781 186 18 24 chr17 14403088 14404198 -75100355 + L1M2 LINE L1 3775 4877 -1971 * 13173 217 32 56 chr17 14404227 14406586 -75097967 + L1P5 LINE L1 3 2418 -4449 653 147 0 0 chr17 14406586 14406681 -75097872 - AluSp/q SINE Alu -31 282 188 13173 217 32 56 chr17 14406681 14407373 -75097180 + L1P5 LINE L1 2418 3125 -3742 1811 128 23 56 chr17 14407373 14407679 -75096874 - AluSq SINE Alu 0 313 18 13173 217 32 56 chr17 14407679 14407744 -75096809 + L1P5 LINE L1 3125 3190 -3677 1306 73 12 0 chr17 14407744 14407908 -75096645 + AluY SINE Alu 130 295 -16 13173 217 32 56 chr17 14407908 14409516 -75095037 + L1P5 LINE L1 3190 4646 -2221 731 179 0 0 chr17 14409516 14409633 -75094920 + FLAM_C SINE Alu 1 117 -16 13173 217 32 56 chr17 14409633 14411190 -75093363 + L1P5 LINE L1 4646 6240 -627 483 278 42 21 chr17 14411794 14411938 -75092615 + MIR3 SINE MIR 58 204 -4 183 200 0 0 chr17 14412075 14412110 -75092443 - MIR SINE MIR -2 260 226 2468 32 0 3 chr17 14413204 14413488 -75091065 - AluY SINE Alu 0 311 29 231 0 50 25 chr17 14413658 14413698 -75090855 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1409 213 26 3 chr17 14414454 14414764 -75089789 - L1ME2 LINE L1 -8 6550 6234 2225 253 96 53 chr17 14414772 14416031 -75088522 - L1ME2 LINE L1 -1062 5478 4166 22 35 0 0 chr17 14416321 14416350 -75088203 + AT_rich Low_complexity Low_complexity 1 29 0 873 288 81 28 chr17 14416350 14416771 -75087782 - L1ME2 LINE L1 -4549 1991 1627 2197 279 93 29 chr17 14416785 14417106 -75087447 - L1MEc LINE L1 -2365 3850 3551 306 0 0 0 chr17 14417106 14417140 -75087413 + (TG)n Simple_repeat Simple_repeat 1 34 0 2197 279 93 29 chr17 14417140 14418546 -75086007 - L1MEc LINE L1 -2664 3551 1958 1368 225 15 0 chr17 14418556 14418827 -75085726 + AluJo SINE Alu 21 295 -17 6231 191 59 50 chr17 14418945 14419986 -75084567 - L1MC3 LINE L1 -8 8057 7027 2106 153 0 6 chr17 14419986 14420300 -75084253 + AluSx SINE Alu 1 312 0 6231 191 59 50 chr17 14420300 14420629 -75083924 - L1MC3 LINE L1 -1038 7027 6669 2336 154 50 21 chr17 14420629 14421051 -75083502 + Tigger2a DNA MER2_type 1 434 0 6231 191 59 50 chr17 14421051 14421228 -75083325 - L1MC3 LINE L1 -1396 6669 6495 1819 158 40 3 chr17 14421229 14421526 -75083027 - AluJb SINE Alu -4 308 1 361 237 18 9 chr17 14421601 14421715 -75082838 - L1P LINE L1 -1045 5101 4987 * 1144 235 131 70 chr17 14421707 14422119 -75082434 - L1P3 LINE L1 -6015 446 10 3741 222 46 39 chr17 14422134 14422246 -75082307 - L1MC3 LINE L1 -743 5683 5573 7073 46 14 1 chr17 14422246 14423661 -75080892 + L1PA7 LINE L1 4719 6146 -8 3741 222 46 39 chr17 14423661 14425450 -75079103 - L1MC3 LINE L1 -853 5573 4593 1302 244 152 18 chr17 14425451 14425845 -75078708 - MER82 DNA MER2_type -1 652 206 1004 215 5 0 chr17 14426157 14426357 -75078196 - MER82 DNA MER2_type -451 202 2 5305 251 62 40 chr17 14426372 14428482 -75076071 - L1MC3 LINE L1 -1846 4580 2519 2430 78 3 3 chr17 14428482 14428790 -75075763 - AluY SINE Alu -3 308 1 5305 251 62 40 chr17 14428790 14428940 -75075613 - L1MC3 LINE L1 -3907 2519 2374 609 133 0 0 chr17 14428940 14429045 -75075508 - L1MA9 LINE L1 -1 6311 6207 5305 251 62 40 chr17 14429045 14429198 -75075355 - L1MC3 LINE L1 -4052 2374 2062 1763 213 50 2 chr17 14429207 14429644 -75074909 + L1 LINE L1 4327 4784 -1362 15096 136 108 7 chr17 14429644 14432915 -75071638 - L1PBa LINE L1 -3261 3601 5 222 235 86 25 chr17 14433868 14433949 -75070604 + MIR SINE MIR 123 208 -54 253 291 126 31 chr17 14434444 14434571 -75069982 - MIR SINE MIR -18 244 106 223 341 33 11 chr17 14434604 14434695 -75069858 - MIR SINE MIR -148 114 22 233 369 0 0 chr17 14434979 14435063 -75069490 + MIR3 SINE MIR 90 173 -35 1013 109 32 4 chr17 14435981 14436228 -75068325 + GA-rich Low_complexity Low_complexity 1 254 0 423 0 0 0 chr17 14436364 14436411 -75068142 + (TG)n Simple_repeat Simple_repeat 1 47 0 646 186 68 114 chr17 14436613 14436833 -75067720 + MER58C DNA MER1_type 6 215 0 238 309 24 63 chr17 14436938 14437064 -75067489 - L2 LINE L2 -226 3046 2926 2523 200 77 35 chr17 14438161 14438690 -75065863 - L1MB5 LINE L1 -6 6168 5610 1925 161 0 0 chr17 14438690 14438981 -75065572 - AluSx SINE Alu -17 295 5 2523 200 77 35 chr17 14438981 14439051 -75065502 - L1MB5 LINE L1 -564 5610 5544 2372 155 26 81 chr17 14439343 14439616 -75064937 - Tigger2a DNA MER2_type -2274 434 195 2301 113 0 0 chr17 14439616 14439925 -75064628 + AluY SINE Alu 1 309 -2 2372 155 26 81 chr17 14439925 14440110 -75064443 - Tigger2a DNA MER2_type -2513 195 1 552 200 32 32 chr17 14441170 14441295 -75063258 + Tigger2 DNA MER2_type 2556 2680 -38 465 350 48 21 chr17 14442085 14442271 -75062282 - MIR SINE MIR -57 205 15 740 292 116 58 chr17 14442646 14443052 -75061501 - MLT1J LTR MaLR 0 511 71 2587 47 0 0 chr17 14443052 14443350 -75061203 - AluY SINE Alu -13 298 1 740 292 116 58 chr17 14443350 14443426 -75061127 - MLT1J LTR MaLR -440 71 1 301 217 42 8 chr17 14443644 14443764 -75060789 + (TA)n Simple_repeat Simple_repeat 1 124 0 413 211 37 111 chr17 14443764 14443840 -75060713 - L1ME3A LINE L1 -4 6166 6086 2007 169 22 30 chr17 14443840 14444206 -75060347 + MLT1A1 LTR MaLR 1 363 -2 413 211 37 111 chr17 14444206 14444319 -75060234 - L1ME3A LINE L1 -84 6086 5988 254 325 13 13 chr17 14444385 14444462 -75060091 + MIR SINE MIR 38 114 -94 222 171 0 0 chr17 14444512 14444553 -75060000 + (TG)n Simple_repeat Simple_repeat 2 42 0 229 360 0 16 chr17 14445170 14445295 -75059258 + GA-rich Low_complexity Low_complexity 5 127 0 1952 145 7 0 chr17 14445997 14446286 -75058267 + AluJb SINE Alu 1 291 -21 191 350 52 10 chr17 14446286 14446383 -75058170 - L3 LINE CR1 -29 1548 1448 1699 167 7 11 chr17 14446504 14446791 -75057762 + AluJo SINE Alu 5 290 -22 1748 254 5 10 chr17 14447031 14447444 -75057109 - L1ME3A LINE L1 -174 5992 5582 2215 97 3 3 chr17 14447447 14447735 -75056818 + AluSc SINE Alu 1 288 -21 333 162 37 7 chr17 14447735 14447871 -75056682 + (TA)n Simple_repeat Simple_repeat 1 140 0 230 0 0 0 chr17 14447872 14447900 -75056653 - Alu SINE Alu -173 130 103 486 102 72 0 chr17 14447906 14448073 -75056480 + (TA)n Simple_repeat Simple_repeat 2 180 0 475 88 88 3 chr17 14448087 14448397 -75056156 + (TA)n Simple_repeat Simple_repeat 1 336 0 243 156 0 44 chr17 14448397 14448442 -75056111 - L1ME3A LINE L1 -567 5595 5553 192 77 0 0 chr17 14449045 14449071 -75055482 + (CAA)n Simple_repeat Simple_repeat 2 27 0 429 385 27 11 chr17 14449097 14449284 -75055269 - MIR SINE MIR -34 228 39 304 289 96 24 chr17 14449640 14449806 -75054747 - MLT1H LTR MaLR -258 291 114 3721 195 59 29 chr17 14449842 14450411 -75054142 + L1MB5 LINE L1 4761 5312 -862 2352 50 40 20 chr17 14450411 14450711 -75053842 + AluY SINE Alu 1 306 -5 3721 195 59 29 chr17 14450711 14451501 -75053052 + L1MB5 LINE L1 5312 6174 0 254 276 66 0 chr17 14451505 14451581 -75052972 - MLT1H LTR MaLR -461 88 8 270 240 125 48 chr17 14451788 14451892 -75052661 + MIR3 SINE MIR 97 208 0 455 133 0 0 chr17 14452451 14452511 -75052042 + AluSx SINE Alu 1 60 -250 2788 10 0 3 chr17 14452511 14452817 -75051736 - AluYa5 SINE Alu -6 305 1 1661 128 4 0 chr17 14452817 14453050 -75051503 + AluSx SINE Alu 53 287 -25 387 275 12 44 chr17 14453204 14453364 -75051189 - MIR SINE MIR -45 217 63 231 373 124 0 chr17 14453452 14453693 -75050860 + L2 LINE L2 2584 2854 -460 431 349 81 51 chr17 14453775 14454110 -75050443 + L2 LINE L2 2927 3271 -1 2245 99 0 3 chr17 14456853 14457157 -75047396 + AluY SINE Alu 1 303 -8 25 0 0 0 chr17 14457283 14457308 -75047245 + AT_rich Low_complexity Low_complexity 1 25 0 224 29 0 29 chr17 14457308 14457342 -75047211 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1972 116 11 0 chr17 14457344 14457621 -75046932 - AluSx SINE Alu -32 280 1 21 71 0 0 chr17 14457994 14458036 -75046517 + AT_rich Low_complexity Low_complexity 1 42 0 577 256 56 104 chr17 14458176 14458570 -75045983 - L2 LINE L2 0 3313 2939 2187 130 3 0 chr17 14458892 14459199 -75045354 + AluSx SINE Alu 1 308 -4 1312 210 80 72 chr17 14459283 14459406 -75045147 - MER66A LTR ERV1 0 478 358 4448 129 11 2 chr17 14459406 14460034 -75044519 - MER41B LTR ERV1 -1 634 1 1312 210 80 72 chr17 14460034 14460387 -75044166 - MER66A LTR ERV1 -120 358 98 3424 151 35 14 chr17 14460660 14461237 -75043316 - L1MA8 LINE L1 -5 6286 5698 2072 130 7 10 chr17 14462619 14462927 -75041626 + AluSx SINE Alu 1 307 -5 1173 228 82 47 chr17 14463008 14463459 -75041094 + MLT1C LTR MaLR 1 467 0 680 287 169 35 chr17 14463753 14464150 -75040403 - LTR16A LTR ERVL 0 457 8 577 343 72 48 chr17 14464410 14464885 -75039668 + HAL1 LINE L1 1116 1601 -906 2713 119 6 3 chr17 14464947 14465308 -75039245 + THE1B LTR MaLR 3 364 0 9998 122 36 31 chr17 14465308 14465389 -75039164 + THE1B-int LTR MaLR 1 80 -1500 2747 88 48 119 chr17 14465389 14465867 -75038686 - MLT2A1 LTR ERVL 0 444 1 9998 122 36 31 chr17 14465867 14467356 -75037197 + THE1B-int LTR MaLR 80 1580 0 2393 161 6 11 chr17 14467356 14467722 -75036831 + THE1B LTR MaLR 1 364 0 564 250 58 24 chr17 14468712 14468920 -75035633 + LTR33 LTR ERVL 305 519 -2 257 294 97 69 chr17 14469261 14469581 -75034972 + HERV16 LTR ERVL 345 673 -4323 551 252 18 0 chr17 14469656 14469767 -75034786 - MER81 DNA DNA -1 113 1 182 125 0 50 chr17 14471860 14471900 -75032653 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 24 77 0 0 chr17 14473564 14473616 -75030937 + AT_rich Low_complexity Low_complexity 1 52 0 1935 121 0 0 chr17 14475008 14475273 -75029280 - AluSg SINE Alu -14 296 32 2463 74 0 0 chr17 14475364 14475660 -75028893 - AluY SINE Alu -15 296 1 1804 127 0 18 chr17 14476463 14476739 -75027814 + AluSx SINE Alu 42 312 0 2338 178 40 9 chr17 14476743 14477188 -75027365 - MER65C LTR ERV1 -2 459 1 278 226 65 0 chr17 14477239 14477301 -75027252 + L2 LINE L2 2926 2991 -322 759 161 115 35 chr17 14477304 14477452 -75027101 + MER53 DNA DNA 2 167 -22 1937 178 39 34 chr17 14477452 14477840 -75026713 - MLT1B LTR MaLR 0 390 1 759 161 115 35 chr17 14477840 14477865 -75026688 + MER53 DNA DNA 167 189 0 479 256 100 43 chr17 14477872 14478153 -75026400 + L2 LINE L2 2989 3285 -28 2261 134 76 8 chr17 14478153 14478549 -75026004 + MSTA LTR MaLR 6 428 0 293 302 16 24 chr17 14478750 14478880 -75025673 - MER5A DNA MER1_type -34 155 16 264 136 0 0 chr17 14480275 14480319 -75024234 + L2 LINE L2 3269 3312 -1 644 238 119 75 chr17 14481294 14481655 -75022898 - MLT1H LTR MaLR 0 549 173 * 1511 218 105 48 chr17 14481632 14482124 -75022429 + MER39 LTR ERV1 6 682 0 673 267 11 0 chr17 14482131 14482311 -75022242 - MLT1H LTR MaLR -366 183 2 305 224 153 10 chr17 14482520 14482618 -75021935 - L2 LINE L2 -6 3266 3155 219 305 58 58 chr17 14482728 14482902 -75021651 + L2 LINE L2 2878 3051 -221 271 245 29 44 chr17 14482999 14483183 -75021370 + LTR48B LTR ERV1 36 258 -386 293 238 114 48 chr17 14483258 14483468 -75021085 + LTR48 LTR ERV1 514 737 -50 200 322 22 11 chr17 14483557 14483647 -75020906 + L2 LINE L2 3174 3264 -8 783 206 138 5 chr17 14483780 14483969 -75020584 + MER58A DNA MER1_type 1 214 -10 255 329 27 0 chr17 14484511 14484584 -75019969 - L2 LINE L2 -5 3267 3193 2334 77 0 46 chr17 14484850 14485174 -75019379 + AluSc SINE Alu 1 309 0 451 286 75 53 chr17 14485357 14485675 -75018878 - Charlie8 DNA MER1_type -2008 409 85 1817 94 0 12 chr17 14485759 14486004 -75018549 + AluSg/x SINE Alu 69 310 -2 22 0 0 0 chr17 14486514 14486536 -75018017 + AT_rich Low_complexity Low_complexity 1 22 0 240 111 0 0 chr17 14486669 14486705 -75017848 + (T)n Simple_repeat Simple_repeat 1 36 0 238 284 66 25 chr17 14487682 14487879 -75016674 + L1MC5 LINE L1 7587 7791 -170 745 208 122 28 chr17 14487900 14488188 -75016365 - MER39 LTR ERV1 0 707 393 211 256 0 0 chr17 14488327 14488366 -75016187 + polypyrimidine Low_complexity Low_complexity 4 42 0 2026 141 16 0 chr17 14488368 14488673 -75015880 - AluSx SINE Alu 0 312 3 813 157 7 59 chr17 14488701 14488854 -75015699 + AluJb SINE Alu 35 179 -133 219 231 31 31 chr17 14488877 14488942 -75015611 + MIR SINE MIR 79 143 -65 239 235 31 71 chr17 14489591 14489689 -75014864 - L3 LINE CR1 -261 1316 1223 383 213 63 63 chr17 14490200 14490312 -75014241 - MER5B DNA MER1_type -1 177 63 1930 116 6 77 chr17 14490312 14490466 -75014087 - AluSx SINE Alu -7 305 185 690 65 0 0 chr17 14490466 14490558 -75013995 + (TTTTA)n Simple_repeat Simple_repeat 4 95 0 1930 116 6 77 chr17 14490558 14490730 -75013823 - AluSx SINE Alu -127 185 2 383 213 63 63 chr17 14490730 14490744 -75013809 - MER5B DNA MER1_type -114 64 51 189 268 122 12 chr17 14490779 14490861 -75013692 + MIR3 SINE MIR 82 172 -36 411 232 249 28 chr17 14490869 14491046 -75013507 + MIR SINE MIR 8 223 -39 26 30 0 0 chr17 14491338 14491371 -75013182 + AT_rich Low_complexity Low_complexity 1 33 0 479 294 56 11 chr17 14491838 14492018 -75012535 - MIR3 SINE MIR -3 205 18 708 189 31 0 chr17 14492137 14492264 -75012289 - MER5A DNA MER1_type -3 186 56 211 150 0 25 chr17 14492329 14492369 -75012184 + (TTA)n Simple_repeat Simple_repeat 2 40 0 230 346 142 0 chr17 14494684 14494811 -75009742 - MIR3 SINE MIR -3 205 61 2498 77 0 0 chr17 14495659 14495970 -75008583 - AluY SINE Alu 0 311 1 2784 163 125 37 chr17 14496195 14496639 -75007914 - MER39 LTR ERV1 0 707 187 2348 107 0 3 chr17 14496639 14496948 -75007605 - AluSg SINE Alu 0 310 3 2784 163 125 37 chr17 14496948 14497152 -75007401 - MER39 LTR ERV1 -520 187 2 338 304 174 0 chr17 14497264 14497402 -75007151 + MER5A DNA MER1_type 28 189 0 525 252 15 28 chr17 14497411 14497558 -75006995 - MER5B DNA MER1_type -1 177 49 255 350 30 26 chr17 14497573 14497746 -75006807 + MER5A DNA MER1_type 1 189 0 759 319 133 24 chr17 14497969 14498028 -75006525 - L2 LINE L2 0 3313 3262 2134 156 71 22 chr17 14498028 14498439 -75006114 - Tigger2a DNA MER2_type 0 434 4 759 319 133 24 chr17 14498439 14499043 -75005510 - L2 LINE L2 -51 3262 2578 1566 126 0 34 chr17 14500962 14501231 -75003322 + L1PB4 LINE L1 5873 6132 -24 207 87 0 65 chr17 14501251 14501297 -75003256 + (TTAAA)n Simple_repeat Simple_repeat 1 43 0 368 227 18 18 chr17 14501304 14501414 -75003139 - L1ME LINE L1 -501 5620 5511 354 336 67 44 chr17 14501525 14501844 -75002709 + L2 LINE L2 2860 3170 -143 2473 105 21 16 chr17 14501844 14502217 -75002336 - THE1C LTR MaLR 0 375 1 8194 151 36 32 chr17 14502217 14503790 -75000763 - THE1C-int LTR MaLR 0 1580 1 2300 103 10 68 chr17 14503790 14504020 -75000533 - THE1C LTR MaLR 0 375 176 2013 78 4 4 chr17 14504020 14504276 -75000277 + AluY SINE Alu 55 310 -1 2300 103 10 68 chr17 14504276 14504443 -75000110 - THE1C LTR MaLR -199 176 1 354 336 67 44 chr17 14504443 14504526 -75000027 + L2 LINE L2 3169 3273 -40 979 298 23 33 chr17 14505124 14505513 -74999040 - LTR16C LTR ERVL -10 481 97 265 231 98 92 chr17 14505889 14506062 -74998491 + MLT1H LTR MaLR 376 549 0 339 229 38 38 chr17 14506609 14506714 -74997839 + L1M4 LINE L1 3951 4055 -2091 651 177 65 0 chr17 14507110 14507234 -74997319 + AluSp/q SINE Alu 173 304 -9 194 320 97 29 chr17 14507262 14507365 -74997188 - L2 LINE L2 0 3313 3204 184 239 0 22 chr17 14508135 14508181 -74996372 - L2 LINE L2 -3 3310 3266 252 351 58 39 chr17 14508500 14508654 -74995899 + MIR SINE MIR 20 176 -86 287 298 62 56 chr17 14508654 14508832 -74995721 - MIR SINE MIR -11 251 73 358 276 0 75 chr17 14508858 14508992 -74995561 - MIR SINE MIR -84 124 1 336 24 0 0 chr17 14509457 14509498 -74995055 + (CA)n Simple_repeat Simple_repeat 2 42 0 182 36 0 36 chr17 14510945 14510973 -74993580 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 207 0 0 0 chr17 14511212 14511235 -74993318 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 684 287 141 17 chr17 14512275 14512630 -74991923 + MLT1J LTR MaLR 69 467 -44 552 232 72 0 chr17 14512936 14513061 -74991492 - MIR SINE MIR -25 237 104 239 197 13 40 chr17 14513299 14513375 -74991178 + A-rich Low_complexity Low_complexity 2 75 0 1013 194 148 26 chr17 14513396 14513700 -74990853 - MER2 DNA MER2_type -1 343 3 2435 127 5 19 chr17 14513861 14514230 -74990323 - THE1B LTR MaLR 0 364 1 865 143 0 36 chr17 14514637 14514777 -74989776 - AluJo SINE Alu -177 135 1 282 289 58 58 chr17 14514837 14515062 -74989491 + L1ME LINE L1 5475 5699 -422 1716 106 0 21 chr17 14515063 14515298 -74989255 + AluSg/x SINE Alu 69 298 -14 527 224 23 0 chr17 14515298 14515472 -74989081 + (TA)n Simple_repeat Simple_repeat 1 178 0 472 229 17 11 chr17 14515485 14515829 -74988724 + (TA)n Simple_repeat Simple_repeat 1 345 0 523 214 6 22 chr17 14515848 14516030 -74988523 + (TA)n Simple_repeat Simple_repeat 2 180 0 619 190 17 11 chr17 14516048 14516227 -74988326 + (TA)n Simple_repeat Simple_repeat 1 180 0 320 118 26 92 chr17 14516231 14516307 -74988246 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516334 14516412 -74988141 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516439 14516517 -74988036 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516544 14516622 -74987931 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516649 14516727 -74987826 + L1MC4 LINE L1 1995 2065 -4361 308 150 16 102 chr17 14516754 14516881 -74987672 + L1MC4 LINE L1 1995 6983 -1339 * 319 272 0 22 chr17 14516857 14516949 -74987604 - L1MC4 LINE L1 -1339 6703 6614 193 146 42 0 chr17 14516954 14517002 -74987551 + (TA)n Simple_repeat Simple_repeat 2 51 0 277 311 139 7 chr17 14517579 14517730 -74986823 - MIR3 SINE MIR -7 201 31 368 353 87 71 chr17 14519913 14520602 -74983951 - L2 LINE L2 -76 3196 2490 412 253 235 12 chr17 14520764 14520930 -74983623 + MIR SINE MIR 57 259 -3 21 0 0 0 chr17 14521657 14521678 -74982875 + AT_rich Low_complexity Low_complexity 1 21 0 183 238 0 24 chr17 14521680 14521722 -74982831 + MIR3 SINE MIR 144 184 -24 270 56 0 0 chr17 14521882 14521918 -74982635 + (TG)n Simple_repeat Simple_repeat 1 36 0 1659 200 67 9 chr17 14522008 14522353 -74982200 + MLT1A1 LTR MaLR 1 365 0 280 286 41 67 chr17 14522480 14522868 -74981685 + L1ME4a LINE L1 3083 3460 -2686 305 271 85 65 chr17 14523152 14523625 -74980928 + L1ME4a LINE L1 3842 4323 -1823 784 299 5 5 chr17 14523688 14523902 -74980651 - MIR SINE MIR -26 236 23 280 309 83 25 chr17 14524145 14524461 -74980092 + L1ME4a LINE L1 5684 6017 -104 23 68 0 0 chr17 14524550 14524594 -74979959 + AT_rich Low_complexity Low_complexity 1 44 0 2122 112 34 0 chr17 14524799 14525093 -74979460 + AluSc SINE Alu 1 304 -5 512 296 31 23 chr17 14525617 14525874 -74978679 + MIR SINE MIR 4 262 0 1446 131 16 0 chr17 14525897 14526142 -74978411 + L1MA2 LINE L1 6056 6304 0 23 0 0 0 chr17 14526142 14526165 -74978388 + AT_rich Low_complexity Low_complexity 1 23 0 2333 100 0 10 chr17 14526174 14526484 -74978069 + AluSc SINE Alu 1 307 -2 925 232 94 3 chr17 14526646 14526943 -74977610 + MER33 DNA MER1_type 1 324 0 1119 226 5 0 chr17 14527758 14527979 -74976574 - MER58A DNA MER1_type -2 222 1 224 271 21 0 chr17 14529142 14529190 -74975363 + L2 LINE L2 3134 3182 -90 267 31 0 0 chr17 14529241 14529273 -74975280 + (CA)n Simple_repeat Simple_repeat 1 32 0 291 284 35 0 chr17 14529450 14529679 -74974874 + (TA)n Simple_repeat Simple_repeat 1 237 0 471 214 29 0 chr17 14529681 14530346 -74974207 + (CATATA)n Simple_repeat Simple_repeat 1 684 0 542 158 110 8 chr17 14530947 14531074 -74973479 + MLT1B LTR MaLR 29 168 -222 201 74 0 0 chr17 14531136 14531163 -74973390 + (CA)n Simple_repeat Simple_repeat 2 28 0 2282 89 14 0 chr17 14531239 14531532 -74973021 + AluSx SINE Alu 1 297 -15 495 235 86 68 chr17 14531645 14531787 -74972766 + MLT1J2 LTR MaLR 56 194 -252 1131 211 45 45 chr17 14531787 14531920 -74972633 - MER58B DNA MER1_type -2079 341 209 2213 89 0 10 chr17 14531920 14532211 -74972342 + AluSx SINE Alu 1 288 -24 1131 211 45 45 chr17 14532211 14532414 -74972139 - MER58B DNA MER1_type -2210 210 5 495 235 86 68 chr17 14532414 14532658 -74971895 + MLT1J2 LTR MaLR 194 444 -2 186 43 0 0 chr17 14533280 14533303 -74971250 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1748 183 3 0 chr17 14533305 14533590 -74970963 - AluJo SINE Alu -26 286 1 2575 7 0 0 chr17 14534109 14534384 -74970169 - AluY SINE Alu 0 311 37 386 169 13 26 chr17 14534559 14534636 -74969917 + MER116 DNA Mariner 4 79 -1 347 238 89 20 chr17 14534771 14534915 -74969638 + MIR SINE MIR 39 151 -57 2626 148 25 9 chr17 14535202 14535640 -74968913 - Tigger2 DNA MER2_type -1 2717 2273 270 140 228 18 chr17 14535630 14535687 -74968866 - Tigger2 DNA MER2_type -2649 69 1 * 2373 97 0 3 chr17 14537385 14537696 -74966857 - AluSg SINE Alu 0 310 1 2209 69 0 41 chr17 14537866 14538156 -74966397 - AluY SINE Alu -6 305 28 247 230 240 20 chr17 14538156 14538256 -74966297 + MIR SINE MIR 41 162 -100 735 191 109 0 chr17 14538352 14538499 -74966054 - MER5A DNA MER1_type -25 164 2 644 118 0 9 chr17 14538568 14538678 -74965875 + (GGAA)n Simple_repeat Simple_repeat 3 111 0 493 301 14 14 chr17 14539166 14539312 -74965241 + MIR SINE MIR 24 169 -93 2060 132 3 20 chr17 14539651 14539954 -74964599 - AluSx SINE Alu -13 299 2 588 296 78 50 chr17 14540318 14540716 -74963837 - MARNA DNA Mariner -29 557 149 246 322 222 0 chr17 14540764 14540935 -74963618 - MIR SINE MIR -19 243 35 816 203 70 0 chr17 14541309 14541467 -74963086 + MER82 DNA MER2_type 1 169 -484 1477 169 0 24 chr17 14541485 14541615 -74962938 + Tigger2a DNA MER2_type 2 134 -2574 2062 95 40 0 chr17 14541615 14541911 -74962642 - AluSp SINE Alu -5 308 1 1477 169 0 24 chr17 14541911 14542147 -74962406 + Tigger2a DNA MER2_type 134 434 0 1253 164 99 34 chr17 14542147 14542256 -74962297 + MER82 DNA MER2_type 199 299 -354 2563 47 3 0 chr17 14542256 14542557 -74961996 + AluY SINE Alu 3 304 -7 1253 164 99 34 chr17 14542557 14542616 -74961937 + MER82 DNA MER2_type 299 353 -300 1981 143 48 38 chr17 14542616 14542987 -74961566 + THE1C LTR MaLR 1 375 0 1253 164 99 34 chr17 14542987 14543078 -74961475 + MER82 DNA MER2_type 353 476 -177 183 80 0 0 chr17 14543841 14543866 -74960687 + (CA)n Simple_repeat Simple_repeat 2 26 0 316 293 100 41 chr17 14544005 14544715 -74959838 + L1MC/D LINE L1 2386 3137 -3009 23 86 0 0 chr17 14544727 14544785 -74959768 + AT_rich Low_complexity Low_complexity 1 58 0 1247 77 0 0 chr17 14544795 14544951 -74959602 - AluY SINE Alu -4 307 152 975 289 82 13 chr17 14545118 14545581 -74958972 + L1MC/D LINE L1 5264 5758 -2050 2429 65 0 0 chr17 14545636 14545928 -74958625 - AluSx SINE Alu -17 295 4 255 305 34 51 chr17 14546814 14546932 -74957621 + MIR SINE MIR 3 118 -144 2099 150 40 29 chr17 14547025 14547405 -74957148 + L1MA7 LINE L1 5902 6285 -6 2116 113 3 10 chr17 14547495 14547795 -74956758 + AluSx SINE Alu 1 298 -14 2413 78 0 7 chr17 14548356 14548664 -74955889 - AluY SINE Alu -5 306 1 2467 84 0 13 chr17 14549110 14549421 -74955132 + AluY SINE Alu 1 307 -4 1240 213 65 76 chr17 14549475 14549496 -74955057 - MLT2C2 LTR ERVL -9 455 435 180 0 0 0 chr17 14549496 14549516 -74955037 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1240 213 65 76 chr17 14549516 14549954 -74954599 - MLT2C2 LTR ERVL -29 435 1 267 221 12 58 chr17 14550533 14550614 -74953939 - L2 LINE L2 -1061 2253 2177 310 376 67 18 chr17 14550614 14550779 -74953774 - MER5B DNA MER1_type 0 178 6 588 299 197 13 chr17 14550872 14551263 -74953290 - L2 LINE L2 -1292 2022 1560 2241 118 0 3 chr17 14551279 14551585 -74952968 + AluSg SINE Alu 1 305 -5 2398 72 0 3 chr17 14551749 14552040 -74952513 + AluSg1 SINE Alu 1 290 -19 2529 240 20 30 chr17 14552215 14552774 -74951779 - MLT2B3 LTR ERVL 0 554 2 22 88 0 0 chr17 14552895 14552952 -74951601 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr17 14553000 14553023 -74951530 + AT_rich Low_complexity Low_complexity 1 23 0 315 355 149 12 chr17 14553531 14554031 -74950522 + L2 LINE L2 2688 3266 -47 1348 208 10 31 chr17 14554236 14554529 -74950024 - AluJo SINE Alu -25 287 1 1093 171 0 18 chr17 14554666 14554836 -74949717 + FAM SINE Alu 1 167 -8 2276 115 0 10 chr17 14554950 14555264 -74949289 - AluY SINE Alu 0 311 1 363 164 0 16 chr17 14556201 14556262 -74948291 + AluJ/FRAM SINE Alu 233 292 -10 194 366 183 0 chr17 14556402 14556495 -74948058 - L2 LINE L2 -2 3270 3161 744 333 50 36 chr17 14556583 14557024 -74947529 - L2 LINE L2 -4 3309 2863 1346 178 99 14 chr17 14557040 14557333 -74947220 - MLT1C LTR MaLR -5 462 145 979 353 73 24 chr17 14557342 14558002 -74946551 - L2 LINE L2 -501 2813 2122 1213 151 31 62 chr17 14558244 14558469 -74946084 - MER20 DNA MER1_type -1 218 1 239 167 198 4 chr17 14559600 14559686 -74944867 - MLT1G1 LTR MaLR 0 590 501 787 356 17 34 chr17 14559726 14560077 -74944476 - MLT1G1 LTR MaLR -175 420 76 5566 58 8 0 chr17 14560436 14561091 -74943462 - L1PA8 LINE L1 -2 6170 5511 2415 69 7 0 chr17 14562057 14562346 -74942207 - AluSc SINE Alu -17 292 2 2168 196 21 128 chr17 14562681 14563345 -74941208 + MLT1E LTR MaLR 1 593 0 2277 112 3 0 chr17 14563512 14563807 -74940746 + AluSp SINE Alu 1 296 -17 196 367 40 7 chr17 14564052 14564202 -74940351 - MIR3 SINE MIR 0 208 54 223 324 98 0 chr17 14564210 14564312 -74940241 - MIR SINE MIR -11 251 140 2168 112 0 0 chr17 14564639 14564925 -74939628 - AluSg SINE Alu -12 298 13 658 173 54 54 chr17 14565044 14565212 -74939341 - MLT1H LTR MaLR 0 549 382 1674 277 9 18 chr17 14565239 14565686 -74938867 + MLT1E2 LTR MaLR 1 443 -183 1871 200 50 74 chr17 14565836 14565921 -74938632 + MLT1D LTR MaLR 3 88 -417 2337 107 0 0 chr17 14565921 14566220 -74938333 + AluSc SINE Alu 1 299 -10 1871 200 50 74 chr17 14566220 14566649 -74937904 + MLT1D LTR MaLR 88 505 0 491 188 80 36 chr17 14566849 14566987 -74937566 - MLT1H LTR MaLR -394 155 12 286 282 106 12 chr17 14567402 14567487 -74937066 - MIR SINE MIR -67 141 49 731 298 113 73 chr17 14567561 14567751 -74936802 + MLT1L LTR MaLR 8 189 -426 2366 164 55 26 chr17 14567751 14568173 -74936380 + Tigger2a DNA MER2_type 1 434 0 731 298 113 73 chr17 14568173 14568194 -74936359 + MLT1L LTR MaLR 189 208 -407 707 280 54 0 chr17 14568194 14568362 -74936191 + MER45A DNA AcHobo 1 177 -1 731 298 113 73 chr17 14568362 14568700 -74935853 + MLT1L LTR MaLR 208 580 -35 254 324 83 0 chr17 14568735 14568843 -74935710 + MIR SINE MIR 75 191 -71 2626 139 21 32 chr17 14568861 14569294 -74935259 - MSTA LTR MaLR 0 428 1 2626 217 107 49 chr17 14569739 14569933 -74934620 + L1MDa LINE L1 18 199 -6341 2270 81 35 0 chr17 14569933 14570217 -74934336 - AluSc SINE Alu -15 294 1 2626 217 107 49 chr17 14570217 14570812 -74933741 + L1MDa LINE L1 199 758 -5782 2072 102 0 68 chr17 14570812 14571135 -74933418 + AluSc SINE Alu 1 301 -8 2626 217 107 49 chr17 14571135 14571656 -74932897 + L1MDa LINE L1 758 1561 -4979 2328 81 0 3 chr17 14571661 14571958 -74932595 + AluY SINE Alu 1 296 -15 275 256 116 0 chr17 14572022 14572108 -74932445 + MER5A DNA MER1_type 7 102 -87 907 147 0 0 chr17 14572134 14572263 -74932290 + FLAM_C SINE Alu 1 129 -4 198 0 0 0 chr17 14573587 14573609 -74930944 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2190 67 0 0 chr17 14573951 14574218 -74930335 + AluY SINE Alu 39 305 -6 377 339 73 17 chr17 14574331 14574508 -74930045 + L2 LINE L2 2857 3043 -229 2107 84 84 0 chr17 14574575 14574859 -74929694 + AluSp SINE Alu 1 308 -5 357 276 0 13 chr17 14575032 14575108 -74929445 + L2 LINE L2 3196 3270 -2 1837 133 37 4 chr17 14575117 14575388 -74929165 + AluSx SINE Alu 1 280 -32 470 247 100 27 chr17 14576091 14576241 -74928312 + MIR SINE MIR 81 241 -21 198 214 0 114 chr17 14576255 14576325 -74928228 - L2 LINE L2 -5 3267 3206 772 286 78 27 chr17 14576589 14576959 -74927594 - L2 LINE L2 -542 2772 2384 496 286 71 16 chr17 14578224 14578406 -74926147 + MIR3 SINE MIR 3 194 -14 814 307 73 16 chr17 14580090 14580474 -74924079 - L1ME3A LINE L1 -1239 4907 4502 1219 256 86 66 chr17 14580482 14581667 -74922886 + L1ME3A LINE L1 4929 6162 -2 2708 199 12 4 chr17 14581753 14582265 -74922288 + MER34 LTR ERV1 27 542 0 1510 178 42 11 chr17 14583453 14583740 -74920813 - L1MC1 LINE L1 0 6333 6038 21 36 0 0 chr17 14583752 14583780 -74920773 + AT_rich Low_complexity Low_complexity 1 28 0 551 286 98 54 chr17 14584064 14584379 -74920174 + MLT1I LTR MaLR 81 409 0 405 244 38 38 chr17 14584414 14584545 -74920008 - L1 LINE L1 -1530 4616 4486 307 304 47 52 chr17 14584645 14584836 -74919717 - L1 LINE L1 -1845 4301 4112 695 241 14 0 chr17 14584873 14585018 -74919535 - MER58B DNA MER1_type 0 341 195 2250 113 0 7 chr17 14585316 14585625 -74918928 - AluSx SINE Alu -5 307 1 823 280 92 48 chr17 14585649 14586042 -74918511 - L2 LINE L2 -5 3308 2899 2270 204 105 11 chr17 14586111 14586543 -74918010 + MLT2B1 LTR ERVL 1 483 -37 255 61 0 0 chr17 14586543 14586576 -74917977 + (CA)n Simple_repeat Simple_repeat 2 34 0 2270 204 105 11 chr17 14586576 14586618 -74917935 + MLT2B1 LTR ERVL 483 520 0 1206 227 64 72 chr17 14587115 14587656 -74916897 - MER39 LTR ERV1 0 707 8 612 238 176 33 chr17 14587879 14588181 -74916372 + L2 LINE L2 2930 3274 -39 281 257 110 9 chr17 14588174 14588283 -74916270 + L2 LINE L2 3150 3269 -3 * 39588 75 14 9 chr17 14588365 14594466 -74910087 + L1PA5 LINE L1 11 6145 -9 531 178 11 0 chr17 14594466 14594556 -74909997 - MER58B DNA MER1_type -250 91 1 243 147 59 29 chr17 14594556 14594624 -74909929 - L1MEc LINE L1 -4121 2275 2206 37 0 0 0 chr17 14594624 14594661 -74909892 + AT_rich Low_complexity Low_complexity 1 37 0 334 314 46 27 chr17 14594892 14595213 -74909340 - L1MDa LINE L1 -3769 2771 2483 1518 195 51 43 chr17 14595224 14595594 -74908959 - MLT1A2 LTR MaLR -1 373 1 404 179 179 19 chr17 14596004 14596110 -74908443 - MER63 DNA MER1_type -313 749 1 207 100 0 0 chr17 14596132 14596162 -74908391 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 194 377 0 0 chr17 14596962 14597039 -74907514 - L2 LINE L2 -553 2761 2685 601 270 48 59 chr17 14598722 14598812 -74905741 + LTR16A LTR ERVL 88 177 -273 812 201 32 37 chr17 14598812 14599001 -74905552 - MER53 DNA DNA -1 188 1 601 270 48 59 chr17 14599001 14599180 -74905373 + LTR16A LTR ERVL 177 354 -96 786 292 135 24 chr17 14599428 14599983 -74904570 + L1ME4a LINE L1 5323 5947 -174 21 0 0 0 chr17 14599989 14600010 -74904543 + AT_rich Low_complexity Low_complexity 1 21 0 714 267 11 6 chr17 14600706 14600882 -74903671 - MER5B DNA MER1_type -1 177 1 500 269 50 31 chr17 14601524 14601712 -74902841 + MIR SINE MIR 16 204 -58 26 0 0 0 chr17 14601712 14601738 -74902815 + AT_rich Low_complexity Low_complexity 1 26 0 614 91 45 23 chr17 14601738 14601914 -74902639 + (TA)n Simple_repeat Simple_repeat 1 180 0 584 262 63 74 chr17 14602721 14603072 -74901481 + L2 LINE L2 1577 1923 -1391 1362 287 137 33 chr17 14603416 14603892 -74900661 - Zaphod DNA AcHobo -3370 661 236 2094 49 38 4 chr17 14603892 14604155 -74900398 - AluY SINE Alu -1 310 39 1362 287 137 33 chr17 14604155 14604218 -74900335 - Zaphod DNA AcHobo -3795 236 181 604 208 286 28 chr17 14604218 14604396 -74900157 - MER58A DNA MER1_type 0 224 1 1362 287 137 33 chr17 14604396 14604454 -74900099 - Zaphod DNA AcHobo -3850 181 1 462 354 52 31 chr17 14604480 14604771 -74899782 + L2 LINE L2 2510 2806 -508 300 278 67 67 chr17 14605214 14605378 -74899175 + L3 LINE CR1 1214 1380 -197 1981 132 0 10 chr17 14605378 14605673 -74898880 + AluSc SINE Alu 1 292 -17 300 278 67 67 chr17 14605673 14605717 -74898836 + L3 LINE CR1 1379 1422 -155 1048 200 69 103 chr17 14605958 14606092 -74898461 + MLT1C LTR MaLR 1 138 -329 2000 115 11 0 chr17 14606092 14606371 -74898182 + AluSx SINE Alu 21 302 -10 1048 200 69 103 chr17 14606371 14606596 -74897957 + MLT1C LTR MaLR 138 348 -119 2142 166 23 43 chr17 14606602 14607000 -74897553 + MLT1B LTR MaLR 1 390 0 688 319 11 7 chr17 14607065 14607335 -74897218 - L1ME3A LINE L1 -208 5962 5692 246 363 35 18 chr17 14607539 14607652 -74896901 - L2 LINE L2 -11 3261 3147 180 331 66 37 chr17 14608054 14608190 -74896363 + L3 LINE CR1 1413 1552 -25 2186 92 0 60 chr17 14608761 14609077 -74895476 - AluSg SINE Alu -13 297 1 294 319 14 35 chr17 14609307 14609451 -74895102 + MIR SINE MIR 4 144 -118 332 316 53 9 chr17 14609615 14609729 -74894824 + MER5A DNA MER1_type 63 181 -8 366 264 70 87 chr17 14611378 14611620 -74892933 + MLT1L LTR MaLR 157 394 -221 532 279 0 7 chr17 14611665 14611805 -74892748 + MLT1L LTR MaLR 477 615 0 2420 80 0 0 chr17 14612009 14612308 -74892245 + AluSc SINE Alu 1 299 -10 367 247 11 3 chr17 14612714 14612807 -74891746 + MER5A DNA MER1_type 3 109 -80 455 129 71 0 chr17 14613183 14613268 -74891285 + AluY SINE Alu 218 308 -3 12067 161 15 28 chr17 14613268 14613712 -74890841 + L1P LINE L1 2591 3039 -3107 2229 100 0 0 chr17 14613712 14614033 -74890520 - AluSc SINE Alu 0 321 1 12067 161 15 28 chr17 14614033 14615843 -74888710 + L1P LINE L1 3039 4818 -1328 887 272 45 47 chr17 14615946 14616416 -74888137 + HAL1b LINE L1 74 542 -806 186 71 0 0 chr17 14616730 14616758 -74887795 + (CA)n Simple_repeat Simple_repeat 1 28 0 2325 93 7 3 chr17 14616935 14617236 -74887317 - AluSc SINE Alu -7 302 1 921 206 51 55 chr17 14617823 14617854 -74886699 + MIR SINE MIR 8 38 -224 2555 65 0 0 chr17 14617854 14618162 -74886391 + AluY SINE Alu 4 311 0 921 206 51 55 chr17 14618162 14618383 -74886170 + MIR SINE MIR 38 259 -3 345 333 15 15 chr17 14621384 14621519 -74883034 + MER5A DNA MER1_type 27 161 -28 186 43 0 0 chr17 14622199 14622222 -74882331 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1431 161 83 12 chr17 14622227 14622364 -74882189 - AluJb SINE Alu -40 272 146 264 59 0 0 chr17 14622364 14622398 -74882155 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 1431 161 83 12 chr17 14622398 14622514 -74882039 - AluJb SINE Alu -166 146 1 1268 193 55 29 chr17 14622792 14623067 -74881486 - AluJo SINE Alu -30 282 1 2096 208 28 63 chr17 14623614 14624304 -74880249 + L1MC/D LINE L1 5146 5818 -743 1831 263 10 14 chr17 14624299 14624804 -74879749 + L1ME1 LINE L1 22 524 -5872 * 1131 203 35 61 chr17 14624801 14625176 -74879377 - L1MEc LINE L1 -4126 2270 1906 * 710 202 86 34 chr17 14625173 14625440 -74879113 - L1M4 LINE L1 -1556 4590 4310 * 254 203 29 29 chr17 14625439 14625508 -74879045 - L1M4 LINE L1 -1556 4590 4522 * 1085 263 48 0 chr17 14625507 14625819 -74878734 - L1MEc LINE L1 -4492 1904 1578 4577 227 66 28 chr17 14625828 14628010 -74876543 + L1ME1 LINE L1 3968 6230 -5 684 249 27 27 chr17 14628022 14628247 -74876306 + L1ME1 LINE L1 5813 6037 -129 694 262 110 4 chr17 14628273 14628510 -74876043 + L1MC/D LINE L1 5555 5816 -1992 1114 215 72 54 chr17 14628659 14628994 -74875559 + MER2 DNA MER2_type 2 342 -2 333 47 0 0 chr17 14629939 14629982 -74874571 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2204 83 0 4 chr17 14629987 14630263 -74874290 - AluSc SINE Alu -34 275 1 235 319 43 69 chr17 14630452 14630568 -74873985 + L2 LINE L2 3138 3250 -22 1326 213 211 38 chr17 14630877 14631323 -74873230 + L1ME3A LINE L1 5422 5789 -381 1832 164 0 3 chr17 14631323 14631610 -74872943 + AluJo SINE Alu 7 292 -20 1326 213 211 38 chr17 14631610 14631780 -74872773 + L1ME3A LINE L1 5789 6169 -1 336 278 165 0 chr17 14632081 14632214 -74872339 + MER5A DNA MER1_type 1 155 -34 2676 187 10 55 chr17 14632215 14632797 -74871756 + MER74A LTR ERVL 3 558 0 2212 123 0 0 chr17 14632801 14633101 -74871452 + AluSg SINE Alu 1 300 -10 1795 167 0 14 chr17 14633572 14633866 -74870687 + AluJo SINE Alu 1 290 -22 2202 116 3 7 chr17 14634261 14634562 -74869991 + AluSx SINE Alu 1 300 -12 2180 132 3 0 chr17 14634696 14635006 -74869547 + AluSx SINE Alu 1 311 -1 229 341 154 10 chr17 14635016 14635224 -74869329 - MIR SINE MIR -12 250 13 1327 212 72 80 chr17 14635481 14635871 -74868682 + LTR26E LTR ERV1 1 456 -166 2430 76 7 0 chr17 14635871 14636175 -74868378 + AluSc SINE Alu 1 306 -3 1327 212 72 80 chr17 14636175 14636341 -74868212 + LTR26E LTR ERV1 456 622 0 261 172 52 0 chr17 14637135 14637193 -74867360 + L2 LINE L2 2995 3055 -217 1667 93 0 0 chr17 14637212 14637426 -74867127 - AluSc SINE Alu -5 304 91 2254 107 0 38 chr17 14638161 14638480 -74866073 - AluSx SINE Alu -5 307 1 413 273 27 27 chr17 14639211 14639361 -74865192 + MER103 DNA DNA 2 151 -15 2295 90 0 0 chr17 14639524 14639838 -74864715 + AluY SINE Alu 1 311 0 244 250 25 150 chr17 14639886 14640046 -74864507 + MIR SINE MIR 28 167 -95 655 303 48 20 chr17 14640057 14640308 -74864245 - MIR SINE MIR 0 262 5 577 276 126 20 chr17 14640312 14640511 -74864042 - L2 LINE L2 0 3313 3094 1899 215 11 23 chr17 14640896 14641475 -74863078 + L1MB8 LINE L1 5092 5666 -518 1648 190 13 10 chr17 14641475 14641786 -74862767 + AluJo SINE Alu 1 312 0 21 36 0 0 chr17 14641798 14641826 -74862727 + AT_rich Low_complexity Low_complexity 1 28 0 2366 125 15 7 chr17 14641872 14641888 -74862665 + THE1A LTR MaLR 1 15 -340 2419 107 56 3 chr17 14641888 14642225 -74862328 + THE1A LTR MaLR 1 355 0 11938 102 23 0 chr17 14642225 14643769 -74860784 + THE1A-int LTR MaLR 1 1580 0 2366 125 15 7 chr17 14643769 14644114 -74860439 + THE1A LTR MaLR 14 348 -7 1560 181 0 21 chr17 14644114 14644396 -74860157 + AluJo SINE Alu 26 301 -11 673 179 65 16 chr17 14644412 14644535 -74860018 + FLAM_C SINE Alu 2 130 -13 1882 194 71 26 chr17 14644536 14644989 -74859564 + L1MB8 LINE L1 5669 6141 -37 3888 129 14 21 chr17 14644989 14645485 -74859068 + MER39B LTR ERV1 1 494 -159 2334 79 0 13 chr17 14645485 14645789 -74858764 + AluY SINE Alu 1 300 -11 3888 129 14 21 chr17 14645789 14645914 -74858639 + MER39B LTR ERV1 494 618 -35 2631 111 19 11 chr17 14645923 14646283 -74858270 + THE1B LTR MaLR 1 363 -1 264 65 0 43 chr17 14646283 14646320 -74858233 + L1MB8 LINE L1 6142 6178 0 679 78 0 0 chr17 14646382 14646472 -74858081 + L1MA8 LINE L1 6002 6091 -200 3162 106 38 100 chr17 14646472 14646798 -74857755 + MER4B LTR ERV1 1 273 -337 2347 76 7 0 chr17 14646798 14647086 -74857467 - AluSq SINE Alu -23 290 1 3162 106 38 100 chr17 14647086 14647371 -74857182 + MER4B LTR ERV1 273 574 -36 1093 135 26 0 chr17 14647395 14647588 -74856965 + L1MA8 LINE L1 6082 6279 -12 1956 170 63 35 chr17 14647595 14648024 -74856529 + LTR56 LTR ERV1 5 445 0 1885 168 128 97 chr17 14648054 14648630 -74855923 + LTR49 LTR ERV1 2 595 0 301 253 13 0 chr17 14648632 14648707 -74855846 + L1ME LINE L1 5473 5548 -618 304 238 67 9 chr17 14648714 14648819 -74855734 - MER113 DNA MER1_type? -405 116 6 273 249 65 77 chr17 14648950 14649119 -74855434 - MIR SINE MIR 0 262 96 2526 62 0 10 chr17 14649534 14649840 -74854713 - AluY SINE Alu -8 303 1 1895 201 62 28 chr17 14649875 14650312 -74854241 + LTR2B LTR ERV1 32 483 -7 378 61 0 0 chr17 14651016 14651065 -74853488 + (CA)n Simple_repeat Simple_repeat 2 50 0 205 316 176 0 chr17 14651423 14651559 -74852994 - MIR SINE MIR -31 231 72 615 280 57 0 chr17 14651568 14651725 -74852828 - MER63A DNA MER1_type -29 181 16 4358 146 15 14 chr17 14651742 14652025 -74852528 + MER50 LTR ERV1 1 282 -452 2180 139 124 21 chr17 14652025 14652413 -74852140 + MSTA LTR MaLR 1 428 0 4358 146 15 14 chr17 14652413 14652850 -74851703 + MER50 LTR ERV1 282 722 -12 482 191 22 52 chr17 14653066 14653202 -74851351 + MER113 DNA MER1_type? 14 145 -376 3468 173 17 3 chr17 14653316 14653905 -74850648 - LTR59 LTR ERV1 0 597 1 2854 202 42 78 chr17 14653909 14654696 -74849857 - LTR59-int LTR ERV1 -5 6753 5995 4446 170 21 33 chr17 14654697 14655491 -74849062 + LTR1 LTR ERV1 1 785 0 1582 202 56 24 chr17 14655491 14655982 -74848571 + HUERS-P2 LTR ERV1 1 572 -2516 25710 164 15 15 chr17 14656020 14661143 -74843410 + HUERS-P2 LTR ERV1 540 5869 -425 467 203 0 0 chr17 14661142 14661239 -74843314 - LTR49-int LTR ERV1 -3222 2724 851 * 1926 99 65 41 chr17 14661246 14661432 -74843121 - AluSx SINE Alu -12 300 103 2053 174 50 21 chr17 14661432 14661869 -74842684 - LTR7 LTR ERV1 0 450 1 1926 99 65 41 chr17 14661869 14661975 -74842578 - AluSx SINE Alu -209 103 1 1737 207 75 44 chr17 14661977 14662494 -74842059 - LTR49-int LTR ERV1 -4050 2281 1670 394 170 10 10 chr17 14662511 14662611 -74841942 + (TA)n Simple_repeat Simple_repeat 1 100 0 1624 168 73 75 chr17 14662622 14663186 -74841367 - LTR49-int LTR ERV1 -4681 1650 886 203 399 101 0 chr17 14663288 14663436 -74841117 - L3 LINE CR1 -1193 384 222 321 26 0 0 chr17 14663509 14663547 -74841006 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 232 85 37 chr17 14663609 14663691 -74840862 - MIR SINE MIR -69 193 108 889 264 109 81 chr17 14663897 14664491 -74840062 + MLT1L LTR MaLR 1 611 -4 1068 176 11 5 chr17 14664694 14664881 -74839672 + MER5A DNA MER1_type 1 188 -1 201 235 123 25 chr17 14665843 14665924 -74838629 + MIR SINE MIR 118 206 -56 2220 116 0 7 chr17 14666082 14666385 -74838168 - AluSq SINE Alu -12 301 1 258 279 74 74 chr17 14666597 14666841 -74837712 - L2 LINE L2 -212 3060 2817 1661 263 63 30 chr17 14668738 14669506 -74835047 + L1MDb LINE L1 775 1538 -4868 2172 112 3 23 chr17 14669506 14669810 -74834743 + AluSx SINE Alu 1 298 -14 1661 263 63 30 chr17 14669810 14669901 -74834652 + L1MDb LINE L1 1538 1624 -4782 1433 202 52 14 chr17 14669954 14670267 -74834286 + AluJo SINE Alu 13 312 0 2625 255 102 22 chr17 14670613 14671592 -74832961 + L1MDb LINE L1 1733 2632 -3774 4700 149 34 18 chr17 14671592 14672364 -74832189 + LTR1 LTR ERV1 2 785 0 2625 255 102 22 chr17 14672364 14673108 -74831445 + L1MDb LINE L1 2632 3591 -2815 988 300 72 22 chr17 14673232 14673632 -74830921 - MLT1J LTR MaLR -91 420 1 888 201 66 105 chr17 14674059 14674482 -74830071 - MER66A LTR ERV1 -143 435 97 287 230 11 11 chr17 14674482 14674569 -74829984 + L2 LINE L2 2473 2559 -755 1224 181 31 44 chr17 14674659 14674886 -74829667 - MER58A DNA MER1_type 0 224 1 448 336 47 44 chr17 14675449 14675723 -74828830 + Charlie8 DNA MER1_type 2 276 -2141 264 119 24 0 chr17 14675893 14675935 -74828618 + Charlie8 DNA MER1_type 1365 1407 -1010 252 373 63 16 chr17 14675946 14676072 -74828481 + MIR SINE MIR 16 147 -61 2125 182 3 42 chr17 14677635 14678015 -74826538 + MLT1A1 LTR MaLR 1 365 0 342 309 117 40 chr17 14678468 14678691 -74825862 + MIR SINE MIR 23 262 0 315 267 100 87 chr17 14678737 14678853 -74825700 + MER5B DNA MER1_type 2 122 -56 378 61 0 0 chr17 14678853 14678902 -74825651 + (TG)n Simple_repeat Simple_repeat 2 50 0 315 267 100 87 chr17 14678902 14678935 -74825618 + MER5B DNA MER1_type 122 153 -25 386 339 51 57 chr17 14679595 14679708 -74824845 - MER5B DNA MER1_type -2 176 63 2284 104 0 0 chr17 14679708 14680005 -74824548 - AluSg SINE Alu -13 297 1 386 339 51 57 chr17 14680005 14680068 -74824485 - MER5B DNA MER1_type -115 63 1 374 206 32 2 chr17 14680195 14680343 -74824210 - MER53 DNA DNA 0 189 5 740 317 39 12 chr17 14680458 14680802 -74823751 + MLT1K LTR MaLR 59 439 -149 1632 168 104 43 chr17 14680812 14680985 -74823568 + L1 LINE L1 4920 5081 -1065 1988 152 3 22 chr17 14680985 14681300 -74823253 - AluSx SINE Alu -3 309 1 1632 168 104 43 chr17 14681300 14681502 -74823051 + L1 LINE L1 5081 5318 -828 430 223 58 43 chr17 14681502 14681641 -74822912 + MLT1K LTR MaLR 448 588 0 220 297 125 0 chr17 14681895 14681959 -74822594 + L2 LINE L2 3196 3267 -5 231 307 179 21 chr17 14683520 14683660 -74820893 - L3 LINE CR1 -1 1576 1415 832 224 33 0 chr17 14683684 14683836 -74820717 + FRAM SINE Alu 1 156 -20 406 298 63 58 chr17 14683861 14684066 -74820487 - L3 LINE CR1 -178 1399 1194 2038 82 14 25 chr17 14684345 14684626 -74819927 + AluSx SINE Alu 1 278 -34 317 215 49 0 chr17 14686026 14686170 -74818383 + (TA)n Simple_repeat Simple_repeat 2 152 0 22 0 0 0 chr17 14686192 14686214 -74818339 + AT_rich Low_complexity Low_complexity 1 22 0 198 277 0 46 chr17 14686313 14686378 -74818175 + L2 LINE L2 3244 3305 -8 192 100 0 100 chr17 14687361 14687411 -74817142 + L2 LINE L2 3269 3313 0 201 243 7 143 chr17 14687414 14687554 -74816999 + L3 LINE CR1 1146 1266 -311 557 250 51 6 chr17 14687554 14687730 -74816823 + MER96B DNA MER1_type? 232 415 -2 3026 85 0 5 chr17 14688036 14688423 -74816130 + MLT2A1 LTR ERVL 1 385 -59 974 130 16 120 chr17 14688433 14688678 -74815875 + MLT1B LTR MaLR 177 388 -2 2079 134 3 7 chr17 14689286 14689593 -74814960 + AluSg SINE Alu 1 306 -4 468 291 32 13 chr17 14690705 14690863 -74813690 + MIR SINE MIR 5 165 -97 186 204 148 0 chr17 14691019 14691073 -74813480 + MIR SINE MIR 85 146 -116 320 252 246 29 chr17 14691887 14692228 -74812325 - L1ME4a LINE L1 0 6121 5707 316 312 58 33 chr17 14692370 14692690 -74811863 - L1ME4a LINE L1 -681 5440 5255 949 295 44 33 chr17 14692970 14693508 -74811045 - L1MC4a LINE L1 -297 5824 5441 212 271 71 0 chr17 14693714 14693799 -74810754 - MER5C DNA MER1_type -1 323 233 322 233 47 0 chr17 14693825 14693911 -74810642 - MER5C DNA MER1_type -200 124 35 2118 113 17 7 chr17 14694465 14694757 -74809796 + AluSx SINE Alu 3 297 -15 701 105 0 76 chr17 14694765 14694870 -74809683 + (GGAA)n Simple_repeat Simple_repeat 3 93 -67 2095 125 0 0 chr17 14694870 14695321 -74809232 + AluSg SINE Alu 1 451 0 701 105 0 76 chr17 14695321 14695385 -74809168 + (GGAA)n Simple_repeat Simple_repeat 93 160 0 334 362 14 50 chr17 14696131 14696276 -74808277 + HAL1 LINE L1 386 522 -1985 1056 224 23 0 chr17 14696276 14696495 -74808058 - MER58A DNA MER1_type 0 224 1 334 362 14 50 chr17 14696495 14696567 -74807986 + HAL1 LINE L1 522 595 -1912 392 297 34 71 chr17 14696726 14697049 -74807504 - L1 LINE L1 -2679 3467 3157 291 304 156 56 chr17 14697066 14697477 -74807076 - L2 LINE L2 -1071 2243 1792 261 242 58 58 chr17 14698188 14698308 -74806245 - LTR28 LTR ERV1 -1 1019 900 526 260 109 71 chr17 14698404 14698843 -74805710 - LTR1B LTR ERV1 -328 498 43 2925 177 35 3 chr17 14698866 14699436 -74805117 - HUERS-P2 LTR ERV1 0 3088 2467 * 3588 213 25 25 chr17 14699435 14700201 -74804352 - HUERS-P2 LTR ERV1 -1707 1381 616 516 194 14 76 chr17 14700172 14700316 -74804237 - HUERS-P2 LTR ERV1 -2952 136 2 * 866 237 120 60 chr17 14700522 14700976 -74803577 - LTR1B LTR ERV1 -38 1240 39 225 131 49 0 chr17 14701195 14701256 -74803297 + L1MCa LINE L1 2005 2068 -4358 403 244 0 21 chr17 14702333 14702434 -74802119 + MER51-int LTR ERV1 154 271 -4640 2335 110 49 9 chr17 14702895 14703426 -74801127 + MER51A LTR ERV1 2 625 -9 1316 149 39 71 chr17 14703460 14703741 -74800812 + MER51A-int LTR ERV1 1 272 -7544 1272 206 24 65 chr17 14703754 14704094 -74800459 + MER51A-int LTR ERV1 247 572 -7244 440 210 0 65 chr17 14704111 14704235 -74800318 + MER51-int LTR ERV1 2472 2587 -2428 341 234 16 62 chr17 14704305 14704433 -74800120 + MER51-int LTR ERV1 693 814 -7002 503 261 39 65 chr17 14704509 14704812 -74799741 + MER51-int LTR ERV1 1434 1630 -5046 313 309 65 0 chr17 14705091 14705214 -74799339 + MER51-int LTR ERV1 1900 2030 -1058 524 341 8 11 chr17 14705431 14705698 -74798855 + MER51-int LTR ERV1 2342 2607 -4069 959 128 63 11 chr17 14705841 14706020 -74798533 + MER51A LTR ERV1 143 426 -208 627 87 76 0 chr17 14706578 14706670 -74797883 - AluSg/x SINE Alu -46 266 168 2412 167 31 31 chr17 14706670 14707118 -74797435 + MER70A LTR ERVL 25 472 0 846 219 17 6 chr17 14707409 14707587 -74796966 - MLT2B3 LTR ERVL -374 180 1 290 276 0 26 chr17 14707633 14707709 -74796844 - L2 LINE L2 -1 3312 3239 23 54 0 0 chr17 14707733 14707770 -74796783 + AT_rich Low_complexity Low_complexity 1 37 0 1915 191 82 32 chr17 14707814 14708275 -74796278 - LTR2B LTR ERV1 0 490 7 1059 142 26 21 chr17 14708275 14708465 -74796088 - L1MA7 LINE L1 -44 6247 6057 241 281 26 98 chr17 14708811 14708964 -74795589 + MER5A DNA MER1_type 35 176 -13 2466 33 40 10 chr17 14709407 14709709 -74794844 + AluY SINE Alu 1 311 0 340 309 53 20 chr17 14710646 14710798 -74793755 - MARNA DNA Mariner -350 236 80 1387 159 5 9 chr17 14711377 14711597 -74792956 + MSTB LTR MaLR 1 219 -207 330 245 75 123 chr17 14712108 14712212 -74792341 + L1ME1 LINE L1 5955 6062 -104 1794 158 34 14 chr17 14712212 14712504 -74792049 + AluJb SINE Alu 1 298 -14 2342 68 0 0 chr17 14712507 14712802 -74791751 + L1PA5 LINE L1 5856 6150 -4 330 245 75 123 chr17 14712802 14712905 -74791648 + L1ME1 LINE L1 6064 6156 -10 245 172 47 16 chr17 14713159 14713223 -74791330 - MER103 DNA DNA -9 157 92 22 0 0 0 chr17 14713308 14713330 -74791223 + AT_rich Low_complexity Low_complexity 1 22 0 189 74 0 0 chr17 14713340 14713367 -74791186 + (CA)n Simple_repeat Simple_repeat 2 28 0 804 211 89 117 chr17 14713372 14713741 -74790812 - MLT2D LTR ERVL -50 364 6 397 193 24 12 chr17 14713752 14713835 -74790718 - MER33 DNA MER1_type -230 94 11 464 193 0 0 chr17 14713844 14713932 -74790621 - MER103 DNA DNA -69 97 10 207 171 49 0 chr17 14713954 14713995 -74790558 + (ATTG)n Simple_repeat Simple_repeat 2 44 0 668 260 35 40 chr17 14714088 14714288 -74790265 + Charlie8 DNA MER1_type 39 237 -2180 262 325 8 43 chr17 14714446 14714563 -74789990 - MIR SINE MIR -56 152 40 387 0 0 0 chr17 14715141 14715184 -74789369 + (TG)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr17 14717597 14717617 -74786936 + (A)n Simple_repeat Simple_repeat 1 20 0 1135 207 43 57 chr17 14719988 14720030 -74784523 - MER58B DNA MER1_type -2079 341 300 2301 109 0 0 chr17 14720030 14720332 -74784221 - AluSx SINE Alu -10 302 1 1135 207 43 57 chr17 14720332 14720589 -74783964 - MER58B DNA MER1_type -2120 300 46 265 250 12 0 chr17 14720706 14720786 -74783767 + (TGAA)n Simple_repeat Simple_repeat 4 84 0 349 304 71 36 chr17 14720909 14721077 -74783476 - L2 LINE L2 0 3313 3140 1392 159 0 21 chr17 14721156 14721389 -74783164 + AluJb SINE Alu 73 300 -12 1170 220 75 12 chr17 14721548 14721871 -74782682 + MLT1A1 LTR MaLR 9 365 0 453 260 86 40 chr17 14722610 14723006 -74781547 + L1ME LINE L1 4928 5341 -805 215 247 82 14 chr17 14723025 14723098 -74781455 - L2 LINE L2 0 3313 3236 397 283 12 64 chr17 14723132 14723178 -74781375 + LTR16A LTR ERVL 99 146 -304 2545 138 41 5 chr17 14723178 14723591 -74780962 + MSTA LTR MaLR 1 428 0 397 283 12 64 chr17 14723591 14723717 -74780836 + LTR16A LTR ERVL 146 262 -188 276 313 103 36 chr17 14723845 14724040 -74780513 + L1ME LINE L1 5386 5593 -528 861 142 0 8 chr17 14724291 14724418 -74780135 - FLAM_C SINE Alu -16 127 2 2119 56 44 7 chr17 14725175 14725473 -74779080 - AluY SINE Alu 0 310 3 225 319 44 9 chr17 14725483 14725596 -74778957 + L2 LINE L2 1933 2049 -1265 1897 147 20 3 chr17 14725601 14725900 -74778653 - AluJb SINE Alu -8 304 1 182 311 67 52 chr17 14725979 14726246 -74778307 - L2 LINE L2 -1265 2049 1779 557 186 10 0 chr17 14726383 14726485 -74778068 - MER58B DNA MER1_type 0 341 239 1054 146 38 16 chr17 14726532 14726717 -74777836 - MER5A DNA MER1_type 0 189 1 751 282 0 5 chr17 14726992 14727201 -74777352 + MER63A DNA MER1_type 1 208 -2 259 289 94 57 chr17 14727645 14727804 -74776749 - MER5B DNA MER1_type -5 173 9 2014 137 0 49 chr17 14727894 14728222 -74776331 + AluJo SINE Alu 1 312 0 256 379 8 15 chr17 14728299 14728431 -74776122 - MIR3 SINE MIR -73 135 5 191 319 28 0 chr17 14729804 14729876 -74774677 + MIR SINE MIR 57 130 -78 687 101 0 0 chr17 14730046 14730145 -74774408 - L1PA8 LINE L1 -2 6170 6072 2275 117 0 0 chr17 14730317 14730625 -74773928 - AluSc SINE Alu -1 308 1 246 304 14 0 chr17 14730626 14730695 -74773858 - MIR SINE MIR -114 148 79 2357 100 0 3 chr17 14731187 14731497 -74773056 + AluSx SINE Alu 1 309 -3 262 203 54 27 chr17 14732174 14732248 -74772305 + L1MC5 LINE L1 7849 7924 -37 2328 105 0 3 chr17 14732640 14732945 -74771608 + AluSg SINE Alu 1 304 -6 2174 172 50 12 chr17 14733277 14733322 -74771231 + MSTA LTR MaLR 1 43 -385 1622 197 14 3 chr17 14733322 14733611 -74770942 + AluJb SINE Alu 6 297 -15 2174 172 50 12 chr17 14733611 14733991 -74770562 + MSTA LTR MaLR 43 428 0 464 289 185 35 chr17 14734519 14734865 -74769688 + MLT1L LTR MaLR 210 607 -8 335 295 33 16 chr17 14735450 14735572 -74768981 + L1ME1 LINE L1 6043 6166 0 462 304 104 66 chr17 14735572 14735714 -74768839 + L1M4 LINE L1 2235 2370 -3776 1980 112 0 25 chr17 14735714 14736000 -74768553 + AluSx SINE Alu 34 312 0 462 304 104 66 chr17 14736000 14736767 -74767786 + L1M4 LINE L1 2370 3179 -2967 624 215 40 105 chr17 14736861 14737089 -74767464 - MER58C DNA MER1_type -1 214 2 517 290 28 23 chr17 14737089 14737265 -74767288 + MER5B DNA MER1_type 2 178 0 948 185 45 6 chr17 14737273 14737451 -74767102 + MER5A DNA MER1_type 1 185 -4 21 36 0 0 chr17 14737676 14737704 -74766849 + AT_rich Low_complexity Low_complexity 1 28 0 2228 127 0 0 chr17 14738538 14738838 -74765715 + AluSg SINE Alu 1 300 -10 2047 121 0 4 chr17 14740282 14740644 -74763909 - AluSc SINE Alu 0 361 1 189 304 9 54 chr17 14740666 14740778 -74763775 + L2 LINE L2 2569 2675 -639 1521 174 61 0 chr17 14741173 14741474 -74763079 - AluJb SINE Alu 0 319 3 666 266 138 56 chr17 14741794 14742170 -74762383 - MLT1I LTR MaLR -2 407 1 345 216 11 23 chr17 14742206 14742294 -74762259 - LTR67 LTR ERVL -13 544 458 524 234 41 29 chr17 14743356 14743505 -74761048 - MLT1H LTR MaLR -15 609 384 473 302 58 50 chr17 14743561 14743839 -74760714 - MLT1H LTR MaLR -258 291 12 1149 269 72 75 chr17 14744917 14745642 -74758911 + Charlie7 DNA MER1_type 2 724 -1888 586 243 91 66 chr17 14746052 14746145 -74758408 - MIR SINE MIR -6 256 167 1984 147 54 48 chr17 14746145 14746424 -74758129 + MER1B DNA MER1_type 2 278 -2432 2162 95 0 11 chr17 14746424 14746707 -74757846 + AluSq SINE Alu 1 280 -33 411 21 0 0 chr17 14746707 14746755 -74757798 + (CA)n Simple_repeat Simple_repeat 1 48 0 1984 147 54 48 chr17 14746755 14746808 -74757745 + MER1B DNA MER1_type 277 337 0 586 243 91 66 chr17 14746808 14746819 -74757734 - MIR SINE MIR -95 167 158 2175 206 127 39 chr17 14746819 14747364 -74757189 + MLT1E LTR MaLR 1 593 0 586 243 91 66 chr17 14747364 14747501 -74757052 - MIR SINE MIR -104 158 8 513 316 0 13 chr17 14747850 14748008 -74756545 + MIR3 SINE MIR 20 175 -33 301 292 124 22 chr17 14749023 14749160 -74755393 + L2 LINE L2 2871 3021 -251 367 223 80 27 chr17 14749289 14749401 -74755152 + LTR16C LTR ERVL 371 488 -3 412 199 133 60 chr17 14749496 14749647 -74754906 + L2 LINE L2 3152 3313 0 207 0 0 0 chr17 14750009 14750032 -74754521 + (A)n Simple_repeat Simple_repeat 1 23 0 603 252 63 19 chr17 14751055 14751261 -74753292 + L2 LINE L2 2684 2898 -416 4073 154 24 63 chr17 14751325 14751853 -74752700 + L1MB3 LINE L1 5379 5863 -320 1761 114 0 4 chr17 14751853 14752089 -74752464 + AluSg SINE Alu 1 235 -75 4073 154 24 63 chr17 14752089 14752398 -74752155 + L1MB3 LINE L1 5863 6183 0 647 241 57 88 chr17 14752752 14752816 -74751737 + L1ME2 LINE L1 5812 5876 -288 2487 63 0 0 chr17 14752816 14753116 -74751437 + AluY SINE Alu 1 300 -11 647 241 57 88 chr17 14753116 14753403 -74751150 + L1ME2 LINE L1 5876 6152 -12 606 89 38 0 chr17 14753712 14753791 -74750762 + AluY SINE Alu 2 83 -227 2214 96 24 0 chr17 14753903 14754195 -74750358 + AluSp SINE Alu 1 299 -14 1131 166 9 23 chr17 14754367 14754584 -74749969 - AluSg/x SINE Alu -14 298 85 938 158 33 0 chr17 14754604 14754788 -74749765 - L1MA8 LINE L1 -244 6047 5858 349 291 30 15 chr17 14754929 14755063 -74749490 + LTR37A LTR ERV1 146 281 -145 592 137 11 0 chr17 14755898 14755993 -74748560 - MER83 LTR ERV1 0 448 353 2431 141 37 5 chr17 14756032 14756466 -74748087 + Tigger3b DNA MER2_type 209 656 -575 759 224 13 7 chr17 14756468 14756620 -74747933 - AluJb SINE Alu -12 300 148 1009 259 34 17 chr17 14758544 14758838 -74745715 - MER89-int LTR ERV1 -5142 1659 1361 1577 196 63 9 chr17 14758847 14759178 -74745375 - MLT1A1 LTR MaLR -4 361 13 339 244 0 22 chr17 14759190 14759280 -74745273 - MER89-int LTR ERV1 -5444 1357 1270 203 376 10 0 chr17 14760374 14760475 -74744078 + (CA)n Simple_repeat Simple_repeat 2 103 0 1402 181 67 38 chr17 14761369 14761965 -74742588 + L1MC/D LINE L1 2350 2961 -3579 * 1704 240 106 44 chr17 14761963 14762668 -74741885 + L1MC/D LINE L1 3369 4117 -2423 2717 162 27 17 chr17 14762698 14763017 -74741536 + Tigger7 DNA MER2_type 17 344 -389 2491 133 5 19 chr17 14763017 14763385 -74741168 + THE1B LTR MaLR 1 363 -1 2717 162 27 17 chr17 14763385 14763539 -74741014 + Tigger7 DNA MER2_type 344 495 -238 2292 78 7 7 chr17 14763539 14763834 -74740719 + AluY SINE Alu 1 295 -16 716 256 111 87 chr17 14763836 14764967 -74739586 + L1MC/D LINE L1 4950 5722 -818 920 224 45 5 chr17 14765093 14765294 -74739259 + MIR SINE MIR 28 236 -26 198 224 0 0 chr17 14765307 14765356 -74739197 + (CAT)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr17 14765935 14765964 -74738589 + AT_rich Low_complexity Low_complexity 1 29 0 986 277 113 38 chr17 14766132 14766656 -74737897 - MLT1L LTR MaLR -12 603 41 377 282 149 22 chr17 14766770 14766951 -74737602 + MLT1L LTR MaLR 1 204 -411 564 252 20 7 chr17 14767119 14767270 -74737283 + MLT1L LTR MaLR 455 607 -8 2445 68 0 0 chr17 14767773 14768066 -74736487 + AluY SINE Alu 15 307 -4 22 0 0 0 chr17 14768658 14768680 -74735873 + AT_rich Low_complexity Low_complexity 1 22 0 1452 147 56 56 chr17 14768680 14768986 -74735567 - L1MA9 LINE L1 -22 6290 5985 2579 117 28 53 chr17 14769050 14769094 -74735459 - MSTA LTR MaLR -2 426 382 2063 103 48 0 chr17 14769094 14769384 -74735169 + AluSc SINE Alu 1 304 -5 2579 117 28 53 chr17 14769384 14769776 -74734777 - MSTA LTR MaLR -46 382 1 1269 194 104 7 chr17 14769866 14770155 -74734398 + L1MD3 LINE L1 7655 7971 -24 915 179 124 79 chr17 14770699 14771119 -74733434 - L1MC5 LINE L1 -30 7931 7493 344 247 0 0 chr17 14771137 14771214 -74733339 - L1MC5 LINE L1 -518 7443 7367 917 326 32 58 chr17 14771321 14771779 -74732774 + L2 LINE L2 2270 2707 -607 2192 121 7 0 chr17 14771779 14772086 -74732467 + AluSq SINE Alu 1 309 -4 917 326 32 58 chr17 14772086 14772304 -74732249 + L2 LINE L2 2707 2929 -385 238 313 72 0 chr17 14772510 14772593 -74731960 - L2 LINE L2 -27 3286 3198 3024 183 19 42 chr17 14772636 14773203 -74731350 + MLT2B3 LTR ERVL 1 554 0 2166 114 13 0 chr17 14773326 14773633 -74730920 + AluSq SINE Alu 1 311 -2 639 184 0 88 chr17 14774102 14774165 -74730388 + AluJb SINE Alu 2 48 -264 2249 100 13 0 chr17 14774165 14774464 -74730089 - AluSp SINE Alu -10 303 1 639 184 0 88 chr17 14774464 14774536 -74730017 + AluJb SINE Alu 48 125 -187 469 57 11 114 chr17 14774536 14774624 -74729929 + MLT2B2 LTR ERVL 437 515 0 215 219 0 0 chr17 14774626 14774667 -74729886 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 1041 183 0 0 chr17 14774703 14774867 -74729686 + AluJb SINE Alu 134 297 -15 277 271 105 60 chr17 14776009 14776275 -74728278 - HAL1b LINE L1 -650 698 421 5853 182 22 12 chr17 14776533 14777950 -74726603 - L1MC2 LINE L1 -8 6336 4906 229 308 19 65 chr17 14778246 14778353 -74726200 - MER94 DNA DNA -27 107 6 378 225 12 0 chr17 14778521 14778601 -74725952 - MIR SINE MIR -71 191 111 1711 151 7 22 chr17 14778857 14779135 -74725418 + AluJb SINE Alu 1 274 -38 315 0 0 0 chr17 14779135 14779170 -74725383 + (TC)n Simple_repeat Simple_repeat 1 35 0 * 378 0 0 0 chr17 14779169 14779211 -74725342 + (CA)n Simple_repeat Simple_repeat 1 42 0 433 223 23 0 chr17 14779823 14779929 -74724624 + MER5A DNA MER1_type 4 112 -77 693 106 0 0 chr17 14781226 14781330 -74723223 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 1952 94 91 14 chr17 14781330 14781617 -74722936 - AluSc SINE Alu 0 309 1 255 240 0 0 chr17 14781619 14781669 -74722884 + MER91 DNA MER1_type 144 193 -3 1989 121 0 3 chr17 14783060 14783342 -74721211 + AluSx SINE Alu 1 281 -31 891 316 10 10 chr17 14783364 14783677 -74720876 - LTR16B LTR ERVL -114 350 38 1960 110 24 17 chr17 14783819 14784111 -74720442 + L1MA8 LINE L1 5995 6288 -3 2230 119 0 6 chr17 14784122 14784433 -74720120 + AluSx SINE Alu 1 309 -3 234 226 172 61 chr17 14785237 14785361 -74719192 - MIR SINE MIR -66 142 35 353 105 0 132 chr17 14785426 14785502 -74719051 - L1PA10 LINE L1 0 6168 6103 284 186 32 186 chr17 14785547 14785703 -74718850 + L1MC5 LINE L1 7786 7917 -44 587 272 146 22 chr17 14786773 14787137 -74717416 - L1ME LINE L1 -365 5756 5348 799 168 8 0 chr17 14787225 14787356 -74717197 - FLAM_A SINE Alu -1 132 1 441 317 95 35 chr17 14787677 14788015 -74716538 - L1ME LINE L1 -1301 4845 4488 434 269 65 104 chr17 14788080 14788389 -74716164 + MLT1J2 LTR MaLR 85 422 -28 2317 153 37 58 chr17 14788790 14789305 -74715248 + MLT1D LTR MaLR 1 504 -1 185 359 80 33 chr17 14789312 14789524 -74715029 + MIR SINE MIR 36 257 -5 551 270 53 53 chr17 14789538 14789764 -74714789 - MIR SINE MIR -29 233 8 202 0 29 57 chr17 14790304 14790339 -74714214 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 300 257 136 7 chr17 14790996 14791136 -74713417 - HAL1b LINE L1 -718 630 473 237 289 31 126 chr17 14791358 14791412 -74713141 + MIR SINE MIR 47 105 -157 1027 191 130 77 chr17 14791412 14791482 -74713071 + MLT1C LTR MaLR 2 67 -400 1827 176 3 3 chr17 14791482 14791794 -74712759 - AluJo SINE Alu 0 312 1 1027 191 130 77 chr17 14791794 14792162 -74712391 + MLT1C LTR MaLR 67 463 -4 237 289 31 126 chr17 14792162 14792266 -74712287 + MIR SINE MIR 105 190 -72 184 265 15 73 chr17 14792471 14792539 -74712014 - MER5A DNA MER1_type -45 144 81 355 305 42 42 chr17 14792831 14792949 -74711604 + MIR SINE MIR 16 133 -129 240 152 0 0 chr17 14792949 14792995 -74711558 - Alu SINE Alu -1 299 254 465 97 0 0 chr17 14792995 14793057 -74711496 - Alu SINE Alu -249 62 1 2090 90 0 0 chr17 14793271 14793538 -74711015 + AluY SINE Alu 37 303 -8 568 320 29 39 chr17 14794363 14794744 -74709809 - MLT1L LTR MaLR -112 503 127 917 192 210 0 chr17 14795387 14795678 -74708875 + LTR50 LTR ERVL 444 795 0 22 35 0 0 chr17 14796461 14796490 -74708063 + AT_rich Low_complexity Low_complexity 1 29 0 600 206 103 3 chr17 14796783 14797057 -74707496 - MLT1J LTR MaLR -27 484 93 4194 170 15 19 chr17 14797168 14798021 -74706532 - L1MB8 LINE L1 -6 6172 5323 1929 178 0 3 chr17 14798408 14798717 -74705836 + AluJo SINE Alu 1 308 -4 261 256 12 37 chr17 14799098 14799180 -74705373 + MIR3 SINE MIR 94 173 -35 2243 105 0 0 chr17 14799635 14799931 -74704622 - AluSx SINE Alu -16 296 1 340 270 73 79 chr17 14800167 14800345 -74704208 - MER5B DNA MER1_type 0 178 2 294 327 71 9 chr17 14800402 14800515 -74704038 + MIR SINE MIR 5 124 -138 1699 46 0 9 chr17 14800682 14800901 -74703652 - L1PA5 LINE L1 0 6154 5938 351 303 48 28 chr17 14801422 14801567 -74702986 - MIR SINE MIR -69 193 46 1934 119 26 13 chr17 14801781 14802083 -74702470 - AluJo SINE Alu -6 306 1 760 289 45 28 chr17 14803101 14803392 -74701161 + L2 LINE L2 3015 3310 -3 436 234 0 11 chr17 14803654 14803748 -74700805 + MIR3 SINE MIR 82 174 -34 2099 118 0 56 chr17 14804468 14804790 -74699763 + AluSx SINE Alu 1 304 -8 2179 121 0 0 chr17 14805087 14805384 -74699169 - AluSq SINE Alu -13 300 4 626 85 24 0 chr17 14805390 14805472 -74699081 - AluSq/x SINE Alu -179 133 50 223 302 62 83 chr17 14806010 14806202 -74698351 - L2 LINE L2 -629 2685 2498 279 293 34 100 chr17 14808249 14808482 -74696071 + MIR SINE MIR 20 235 -27 2434 69 0 7 chr17 14808575 14808879 -74695674 + AluY SINE Alu 1 302 -9 1367 155 159 7 chr17 14808970 14809241 -74695312 - AluJb SINE Alu 0 312 1 182 250 0 83 chr17 14810474 14810534 -74694019 - MIR SINE MIR -65 197 143 189 0 0 0 chr17 14810789 14810810 -74693743 + (T)n Simple_repeat Simple_repeat 1 21 0 606 274 114 20 chr17 14811894 14812095 -74692458 + MIR SINE MIR 22 241 -21 252 86 0 0 chr17 14812711 14812746 -74691807 + (TATG)n Simple_repeat Simple_repeat 2 36 0 431 276 91 10 chr17 14812813 14813077 -74691476 - L1ME LINE L1 -312 5809 5521 2431 61 34 0 chr17 14813082 14813379 -74691174 - AluY SINE Alu -4 307 1 186 43 0 0 chr17 14813684 14813707 -74690846 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 717 186 106 6 chr17 14813922 14814083 -74690470 + MER58A DNA MER1_type 44 220 -4 210 174 0 0 chr17 14814185 14814231 -74690322 + GA-rich Low_complexity Low_complexity 1 46 0 899 231 49 0 chr17 14814411 14814614 -74689939 + MIR SINE MIR 19 231 -31 575 319 80 37 chr17 14814712 14815248 -74689305 - L2 LINE L2 -863 2451 1893 28 48 0 0 chr17 14815307 14815349 -74689204 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr17 14815545 14815570 -74688983 + AT_rich Low_complexity Low_complexity 1 25 0 485 315 11 16 chr17 14815602 14815786 -74688767 - MER5A DNA MER1_type 0 189 7 311 260 29 29 chr17 14817163 14817336 -74687217 - L1ME4a LINE L1 -5 6116 5944 2316 92 7 0 chr17 14817531 14817826 -74686727 - AluSq SINE Alu -16 297 1 742 234 77 30 chr17 14817888 14818123 -74686430 + MIR SINE MIR 17 262 0 372 296 26 0 chr17 14818138 14818413 -74686140 - L1MC4a LINE L1 -302 5819 5664 429 290 124 19 chr17 14818444 14818703 -74685850 - L1ME4a LINE L1 -299 5822 5537 405 281 120 20 chr17 14818706 14819032 -74685521 - L1ME4a LINE L1 -657 5513 5161 35 41 0 0 chr17 14819136 14819185 -74685368 + AT_rich Low_complexity Low_complexity 1 49 0 323 309 32 32 chr17 14819950 14820076 -74684477 - L2 LINE L2 -5 3308 3183 477 219 35 9 chr17 14820270 14820384 -74684169 + L2 LINE L2 3194 3310 -3 292 312 70 67 chr17 14821548 14821907 -74682646 - MLT1J LTR MaLR -36 475 116 295 264 116 31 chr17 14822581 14822710 -74681843 - MER5A DNA MER1_type -1 188 49 191 306 65 65 chr17 14822607 14822731 -74681822 + MER5A DNA MER1_type 48 171 -18 * 21 0 0 0 chr17 14823308 14823329 -74681224 + AT_rich Low_complexity Low_complexity 1 21 0 632 340 45 47 chr17 14823472 14823831 -74680722 + L2 LINE L2 2914 3271 -1 806 180 0 37 chr17 14826773 14826934 -74677619 + FRAM SINE Alu 1 155 -21 225 179 30 15 chr17 14827139 14827206 -74677347 + (TA)n Simple_repeat Simple_repeat 1 68 0 217 255 0 0 chr17 14827671 14827722 -74676831 - MIR SINE MIR -15 247 197 656 333 123 12 chr17 14827727 14828126 -74676427 + L3 LINE CR1 1116 1558 -19 285 341 88 0 chr17 14828193 14828375 -74676178 + L2 LINE L2 2508 2705 -609 1381 213 22 6 chr17 14828396 14828710 -74675843 - MLT1E3 LTR MaLR -2 622 304 2321 144 81 0 chr17 14828786 14829181 -74675372 - MSTC LTR MaLR 0 428 2 1775 171 23 0 chr17 14829231 14829535 -74675018 - AluJo SINE Alu 0 312 2 216 0 0 0 chr17 14829545 14829569 -74674984 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1057 159 26 10 chr17 14830749 14830944 -74673609 + MER2 DNA MER2_type 140 337 -8 184 214 24 0 chr17 14832051 14832093 -74672460 + MER5A DNA MER1_type 147 189 0 180 323 91 51 chr17 14832542 14832818 -74671735 + L2 LINE L2 2156 2442 -872 565 338 169 18 chr17 14833160 14833721 -74670832 - L2 LINE L2 -32 3240 2545 1117 187 48 5 chr17 14833721 14833930 -74670623 - MER20 DNA MER1_type -1 218 1 565 338 169 18 chr17 14833930 14834076 -74670477 - L2 LINE L2 -727 2545 2422 205 266 38 63 chr17 14834639 14834718 -74669835 + L2 LINE L2 3196 3272 0 31 58 0 0 chr17 14837478 14837530 -74667023 + AT_rich Low_complexity Low_complexity 1 52 0 323 296 26 0 chr17 14838078 14838193 -74666360 - L1ME4a LINE L1 -273 5848 5731 230 286 0 0 chr17 14838203 14838259 -74666294 - L1ME4a LINE L1 -444 5677 5622 273 316 82 0 chr17 14838561 14838659 -74665894 - L2 LINE L2 -12 3301 3196 * 473 273 68 70 chr17 14838652 14838874 -74665679 - L1ME4a LINE L1 -89 6032 5810 2100 126 0 10 chr17 14838874 14839183 -74665370 - AluSq SINE Alu -7 306 1 473 273 68 70 chr17 14839183 14839360 -74665193 - L1ME4a LINE L1 -311 5810 5634 304 293 36 50 chr17 14839563 14839703 -74664850 - L1ME4a LINE L1 -897 5436 5299 781 249 34 10 chr17 14839860 14840069 -74664484 - MER20 DNA MER1_type -5 214 1 371 181 219 0 chr17 14840190 14840295 -74664258 - MER94 DNA DNA 0 134 7 192 77 0 0 chr17 14840384 14840410 -74664143 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 239 0 32 0 chr17 14840537 14840568 -74663985 + (CA)n Simple_repeat Simple_repeat 2 33 0 536 321 30 0 chr17 14840693 14840861 -74663692 - L3 LINE CR1 -143 1434 1262 234 230 0 95 chr17 14841093 14841167 -74663386 - MIR SINE MIR -10 252 186 250 188 0 31 chr17 14843095 14843159 -74661394 + (TATG)n Simple_repeat Simple_repeat 2 63 0 268 321 43 51 chr17 14845607 14845850 -74658703 - L2 LINE L2 -294 2978 2735 223 361 83 0 chr17 14845861 14845969 -74658584 + L2 LINE L2 2746 2862 -452 180 231 0 0 chr17 14847230 14847282 -74657271 + T-rich Low_complexity Low_complexity 6 57 0 245 260 0 0 chr17 14847923 14847973 -74656580 + L2 LINE L2 3222 3271 -1 3672 162 30 3 chr17 14848208 14848881 -74655672 + L1PB4 LINE L1 5453 6143 -13 580 172 52 0 chr17 14849066 14849182 -74655371 + Tigger7 DNA MER2_type 17 138 -567 1144 263 80 62 chr17 14849265 14849521 -74655032 + L2 LINE L2 2250 2500 -814 198 0 0 0 chr17 14849521 14849543 -74655010 + (CA)n Simple_repeat Simple_repeat 2 23 0 1144 263 80 62 chr17 14849543 14849784 -74654769 + L2 LINE L2 2500 2756 -558 3454 157 57 72 chr17 14850387 14851184 -74653369 - LTR1 LTR ERV1 0 785 1 1251 320 159 27 chr17 14852218 14853485 -74651068 - L2 LINE L2 0 3272 1851 460 171 76 38 chr17 14854381 14854486 -74650067 + MIR SINE MIR 56 164 -98 193 288 180 36 chr17 14856021 14856132 -74648421 - MIR3 SINE MIR -70 138 12 402 21 0 0 chr17 14860785 14860832 -74643721 + (TG)n Simple_repeat Simple_repeat 1 47 0 2040 109 7 10 chr17 14861708 14862012 -74642541 - AluSx SINE Alu -9 303 1 22 0 0 0 chr17 14862012 14862034 -74642519 + AT_rich Low_complexity Low_complexity 1 22 0 30 69 0 0 chr17 14862153 14862211 -74642342 + AT_rich Low_complexity Low_complexity 1 58 0 293 320 87 23 chr17 14863305 14863477 -74641076 + MIR SINE MIR 6 188 -74 27 0 0 0 chr17 14864317 14864344 -74640209 + AT_rich Low_complexity Low_complexity 1 27 0 35 78 0 0 chr17 14865382 14865459 -74639094 + AT_rich Low_complexity Low_complexity 1 77 0 22 0 0 0 chr17 14865688 14865710 -74638843 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr17 14866251 14866284 -74638269 + AT_rich Low_complexity Low_complexity 1 33 0 866 137 13 13 chr17 14867651 14867804 -74636749 - L1MD1 LINE L1 0 6242 6090 21 0 0 0 chr17 14868158 14868179 -74636374 + AT_rich Low_complexity Low_complexity 1 21 0 571 263 21 21 chr17 14868269 14868455 -74636098 - MER5A DNA MER1_type -2 187 2 489 269 71 34 chr17 14869933 14870171 -74634382 + L1ME4a LINE L1 5487 5733 -388 330 287 88 29 chr17 14870175 14870311 -74634242 + L1ME4a LINE L1 5770 5913 -208 189 0 0 0 chr17 14870817 14870838 -74633715 + (T)n Simple_repeat Simple_repeat 1 21 0 303 253 72 72 chr17 14871046 14871240 -74633313 - L1ME4a LINE L1 -195 5926 5733 754 219 96 14 chr17 14871779 14871998 -74632555 + MIR SINE MIR 13 249 -13 323 268 126 65 chr17 14873169 14873400 -74631153 - L1ME4a LINE L1 -249 5872 5628 1792 143 37 3 chr17 14874124 14874424 -74630129 + AluJo SINE Alu 1 310 -2 22 35 0 0 chr17 14876109 14876138 -74628415 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr17 14877656 14877685 -74626868 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 738 352 52 28 chr17 14878328 14878754 -74625799 - L2 LINE L2 -352 2962 2527 7317 111 20 20 chr17 14878951 14880649 -74623904 + L1MA2 LINE L1 4609 6304 0 266 180 16 16 chr17 14880737 14880798 -74623755 - L1ME4a LINE L1 -96 6025 5965 360 199 46 26 chr17 14881758 14881909 -74622644 + (TATAA)n Simple_repeat Simple_repeat 5 158 0 633 292 93 19 chr17 14882492 14882749 -74621804 + MLT1K LTR MaLR 313 588 0 1936 145 3 7 chr17 14882855 14883158 -74621395 + AluJb SINE Alu 1 302 -10 432 0 0 0 chr17 14884393 14884441 -74620112 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 57 0 0 chr17 14884728 14884763 -74619790 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 14884798 14884820 -74619733 + AT_rich Low_complexity Low_complexity 1 22 0 1536 249 74 75 chr17 14884979 14885036 -74619517 - MLT2F LTR ERVL 0 663 607 1955 135 39 39 chr17 14885036 14885400 -74619153 - THE1B LTR MaLR 0 364 1 1536 249 74 75 chr17 14885400 14886004 -74618549 - MLT2F LTR ERVL -56 607 3 920 287 68 24 chr17 14886038 14886463 -74618090 - ERVL-F LTR ERVL -43 5721 5278 1735 229 48 81 chr17 14886493 14887184 -74617369 + L1ME1 LINE L1 5512 6334 0 327 353 61 49 chr17 14887918 14888264 -74616289 - L2 LINE L2 -716 2598 2249 2501 84 0 0 chr17 14888300 14888611 -74615942 + AluY SINE Alu 1 311 0 225 246 0 0 chr17 14888692 14888749 -74615804 + L2 LINE L2 2554 2610 -704 377 292 154 60 chr17 14888936 14889101 -74615452 - MIR SINE MIR -6 256 61 2204 72 10 17 chr17 14889101 14889394 -74615159 - AluY SINE Alu -20 291 1 377 292 154 60 chr17 14889394 14889461 -74615092 - MIR SINE MIR -201 61 2 245 296 63 144 chr17 14889495 14889764 -74614789 + L2 LINE L2 2920 3150 -122 1597 190 55 15 chr17 14889764 14890091 -74614462 - MER58B DNA MER1_type -1 340 1 245 296 63 144 chr17 14890091 14890203 -74614350 + L2 LINE L2 3150 3270 -2 324 288 163 12 chr17 14890304 14890464 -74614089 + L1ME LINE L1 5636 5819 -302 411 255 0 0 chr17 14891518 14891616 -74612937 + MER103 DNA DNA 2 99 -67 415 280 72 8 chr17 14891946 14892071 -74612482 + MER94 DNA DNA 1 133 -1 1032 209 67 27 chr17 14892253 14892478 -74612075 - MER8 DNA MER2_type 0 239 6 189 94 0 0 chr17 14892563 14892595 -74611958 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 16426 133 17 19 chr17 14894111 14896103 -74608450 + Ricksha DNA DNA 133 2167 -1079 2085 103 7 7 chr17 14896103 14896422 -74608131 - AluSx SINE Alu 0 319 1 16426 133 17 19 chr17 14896422 14897490 -74607063 + Ricksha DNA DNA 2167 3236 -10 414 208 119 0 chr17 14897810 14897911 -74606642 - MER94 DNA DNA -19 115 3 13181 129 27 8 chr17 14898062 14899479 -74605074 + Tigger1 DNA MER2_type 1 1470 -948 2013 75 13 79 chr17 14899479 14899784 -74604769 - AluSg SINE Alu -9 301 17 13181 129 27 8 chr17 14899784 14900372 -74604181 + Tigger1 DNA MER2_type 1470 2045 -373 1960 149 58 25 chr17 14900383 14900746 -74603807 - THE1C LTR MaLR 0 375 1 10556 115 21 45 chr17 14900746 14902362 -74602191 - THE1C-int LTR MaLR 0 1580 3 726 124 9 0 chr17 14902364 14902469 -74602084 - THE1C LTR MaLR 0 375 270 2780 153 32 0 chr17 14902637 14903074 -74601479 + MSTB2 LTR MaLR 3 453 -4 1728 179 7 10 chr17 14903400 14903697 -74600856 + AluJo SINE Alu 1 296 -16 411 333 57 50 chr17 14904211 14904490 -74600063 - L2 LINE L2 -5 3267 2987 180 335 165 32 chr17 14904505 14904997 -74599556 + L2 LINE L2 2134 2690 -624 2306 140 8 21 chr17 14905049 14905435 -74599118 - L1P5 LINE L1 -424 5732 5352 1360 194 99 0 chr17 14905435 14905719 -74598834 - AluJb SINE Alu 0 312 1 877 113 0 0 chr17 14905734 14905849 -74598704 - FLAM_C SINE Alu -18 125 11 586 118 41 84 chr17 14905850 14905991 -74598562 - L1 LINE L1 -780 5366 5232 289 185 19 0 chr17 14906015 14906069 -74598484 - L2 LINE L2 -68 3245 3191 787 237 58 10 chr17 14906547 14906754 -74597799 + L1ME1 LINE L1 4112 4328 -1818 3051 212 76 37 chr17 14906801 14907044 -74597509 + L1ME1 LINE L1 5073 5305 -861 1825 154 20 10 chr17 14907044 14907342 -74597211 + AluJo SINE Alu 1 301 -11 3051 212 76 37 chr17 14907342 14908135 -74596418 + L1ME1 LINE L1 5305 6150 -16 492 260 64 35 chr17 14908183 14908356 -74596197 + MIR SINE MIR 6 183 -79 301 329 206 26 chr17 14908431 14909010 -74595543 - L2 LINE L2 -24 3248 2561 180 164 18 91 chr17 14912380 14912435 -74592118 + L2 LINE L2 3222 3272 0 273 286 20 51 chr17 14913967 14914065 -74590488 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 14914980 14915001 -74589552 + AT_rich Low_complexity Low_complexity 1 21 0 467 229 12 0 chr17 14915014 14915097 -74589456 + 7SLRNA srpRNA srpRNA 1 84 -236 423 0 0 0 chr17 14915126 14915173 -74589380 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr17 14915271 14915299 -74589254 + AT_rich Low_complexity Low_complexity 1 28 0 195 282 247 0 chr17 14916717 14916802 -74587751 + L2 LINE L2 3123 3228 -44 198 0 0 0 chr17 14916823 14916845 -74587708 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 487 223 108 57 chr17 14916854 14917011 -74587542 - MIR SINE MIR -28 234 70 408 323 62 0 chr17 14917110 14917240 -74587313 - MIR3 SINE MIR -69 139 2 346 103 138 0 chr17 14917756 14917814 -74586739 - MER5A DNA MER1_type -120 69 4 26 64 0 0 chr17 14918005 14918052 -74586501 + AT_rich Low_complexity Low_complexity 1 47 0 485 298 135 34 chr17 14919009 14919501 -74585052 + L2 LINE L2 2652 3200 -72 211 220 20 20 chr17 14919767 14919817 -74584736 + MIR SINE MIR 97 146 -62 1010 279 33 42 chr17 14919938 14920396 -74584157 + L1ME4a LINE L1 5486 5939 -182 189 107 0 0 chr17 14920960 14920988 -74583565 + (T)n Simple_repeat Simple_repeat 1 28 0 9243 101 18 23 chr17 14921292 14922600 -74581953 - HSMAR2 DNA Mariner -1 1301 1 206 290 245 7 chr17 14924476 14924631 -74579922 - MIR SINE MIR -63 199 8 506 293 79 13 chr17 14926039 14926268 -74578285 + MIR SINE MIR 2 245 -17 2423 61 0 3 chr17 14927298 14927591 -74576962 - AluSc SINE Alu -17 292 1 941 216 50 0 chr17 14928226 14928425 -74576128 - MER3 DNA MER1_type 0 209 1 1165 183 5 0 chr17 14928532 14928718 -74575835 - MER5A DNA MER1_type 0 189 3 290 313 114 68 chr17 14929032 14929400 -74575153 - L2 LINE L2 -5 3267 2883 336 151 0 0 chr17 14931625 14931678 -74572875 - L2 LINE L2 0 3313 3261 411 311 72 50 chr17 14933736 14933916 -74570637 + L2 LINE L2 3007 3190 -82 1068 167 61 10 chr17 14935090 14935288 -74569265 - AluJo SINE Alu -13 299 92 228 237 226 0 chr17 14935366 14935459 -74569094 + MIR SINE MIR 125 238 -24 194 298 0 0 chr17 14935463 14935520 -74569033 + L2 LINE L2 2301 2357 -957 247 284 110 0 chr17 14935743 14935852 -74568701 + L2 LINE L2 2959 3079 -234 33 56 0 0 chr17 14936087 14936141 -74568412 + AT_rich Low_complexity Low_complexity 1 54 0 428 350 63 19 chr17 14937163 14937526 -74567027 + L2 LINE L2 2301 2679 -635 216 264 0 0 chr17 14937567 14937620 -74566933 + (CA)n Simple_repeat Simple_repeat 2 54 0 1539 165 4 23 chr17 14937686 14937947 -74566606 + AluJo SINE Alu 1 256 -56 454 309 77 82 chr17 14938082 14938460 -74566093 + L2 LINE L2 2886 3261 -11 286 232 61 0 chr17 14939294 14939393 -74565160 + MER20B DNA MER1_type 53 157 -626 22 0 0 0 chr17 14940218 14940240 -74564313 + AT_rich Low_complexity Low_complexity 1 22 0 1327 191 70 30 chr17 14941662 14942033 -74562520 - L1MA7 LINE L1 0 6291 5906 2122 185 65 7 chr17 14942033 14942449 -74562104 - Tigger7 DNA MER2_type -2047 440 1 722 277 123 42 chr17 14942797 14943277 -74561276 + L2 LINE L2 2544 3147 -166 1884 70 25 0 chr17 14943277 14943518 -74561035 - AluSg/x SINE Alu 0 312 66 722 277 123 42 chr17 14943518 14943699 -74560854 + L2 LINE L2 3147 3312 -1 282 292 109 15 chr17 14943965 14944167 -74560386 + L2 LINE L2 3044 3264 -49 291 339 90 16 chr17 14945753 14946075 -74558478 - L2 LINE L2 -337 2977 2632 441 261 22 15 chr17 14946901 14947035 -74557518 - MLT1K LTR MaLR 0 588 454 383 208 0 13 chr17 14947118 14947195 -74557358 - L2 LINE L2 -32 3281 3206 228 195 0 0 chr17 14948615 14948656 -74555897 + L2 LINE L2 3257 3297 -16 192 317 69 41 chr17 14948676 14948821 -74555732 + L2 LINE L2 2934 3082 -190 997 241 92 15 chr17 14950196 14950532 -74554021 + MARNA DNA Mariner 77 438 -148 276 267 133 15 chr17 14950872 14951007 -74553546 - L1ME4a LINE L1 -5 6116 5966 900 282 115 6 chr17 14951261 14951601 -74552952 - L1MC4 LINE L1 -976 7066 6690 264 241 5 151 chr17 14952047 14952246 -74552307 - L1ME4a LINE L1 -406 5715 5546 2326 122 0 0 chr17 14952371 14952682 -74551871 - AluSq SINE Alu -2 311 1 2111 126 0 0 chr17 14952995 14953288 -74551265 - AluSx SINE Alu -19 293 1 1816 224 45 25 chr17 14954185 14954332 -74550221 - Charlie1b DNA MER1_type -2242 519 376 2213 101 0 14 chr17 14954332 14954628 -74549925 + AluSx SINE Alu 5 296 -16 1816 224 45 25 chr17 14954628 14954989 -74549564 - Charlie1b DNA MER1_type -2385 376 1 1392 276 128 36 chr17 14955157 14956131 -74548422 + L2 LINE L2 2256 3310 -3 686 230 132 62 chr17 14956257 14956321 -74548232 - MLT1K LTR MaLR -24 564 506 2153 99 44 3 chr17 14956321 14956615 -74547938 + AluSc SINE Alu 1 306 -3 686 230 132 62 chr17 14956615 14956807 -74547746 - MLT1K LTR MaLR -82 506 290 465 288 36 36 chr17 14956826 14957048 -74547505 - L1MC4a LINE L1 -1146 6662 6441 207 398 11 0 chr17 14957681 14957774 -74546779 + L2 LINE L2 114 207 -3107 203 348 22 0 chr17 14957876 14957965 -74546588 + L2 LINE L2 3223 3313 0 2069 119 3 14 chr17 14960060 14960354 -74544199 - AluSc SINE Alu -18 291 1 2187 105 0 52 chr17 14960811 14961135 -74543418 - AluSx SINE Alu -5 307 1 299 336 8 0 chr17 14962820 14962942 -74541611 + MER20B DNA MER1_type 33 155 -628 2699 175 26 16 chr17 14963212 14963231 -74541322 - Tigger7 DNA MER2_type -1970 517 500 2301 110 0 7 chr17 14963231 14963541 -74541012 - AluSc SINE Alu -1 308 1 2699 175 26 16 chr17 14963541 14963697 -74540856 - Tigger7 DNA MER2_type -1987 500 347 2342 136 5 19 chr17 14963697 14964065 -74540488 - THE1B LTR MaLR -1 363 1 2699 175 26 16 chr17 14964065 14964384 -74540169 - Tigger7 DNA MER2_type -2140 347 17 1657 241 107 44 chr17 14964414 14965116 -74539437 - L1MDa LINE L1 -2423 4117 3372 1358 183 67 38 chr17 14965118 14965713 -74538840 - L1MDa LINE L1 -3580 2960 2350 340 244 0 22 chr17 14967800 14967890 -74536663 + MER89-int LTR ERV1 1270 1357 -5444 1596 196 63 9 chr17 14967902 14968233 -74536320 + MLT1A1 LTR MaLR 13 361 -4 1032 255 34 17 chr17 14968242 14968536 -74536017 + MER89-int LTR ERV1 1361 1659 -5142 728 178 0 0 chr17 14970488 14970606 -74533947 + AluJb SINE Alu 183 300 -12 2399 141 37 5 chr17 14970608 14971042 -74533511 - Tigger3b DNA MER2_type -575 656 209 595 137 11 0 chr17 14971081 14971176 -74533377 + MER83 LTR ERV1 353 448 0 336 299 30 15 chr17 14972011 14972145 -74532408 - LTR37A LTR ERV1 -145 281 146 939 158 33 0 chr17 14972286 14972470 -74532083 + L1MA8 LINE L1 5858 6047 -244 1148 152 18 37 chr17 14972490 14972707 -74531846 + AluSg/x SINE Alu 83 295 -15 2216 97 24 0 chr17 14972879 14973169 -74531384 - AluSp SINE Alu -16 297 1 571 89 38 0 chr17 14973281 14973360 -74531193 - AluY SINE Alu -228 83 2 486 264 67 63 chr17 14973669 14973953 -74530600 - L1ME2 LINE L1 -12 6152 5868 2523 66 0 0 chr17 14973957 14974259 -74530294 - AluY SINE Alu -9 302 1 380 294 186 14 chr17 14974320 14974599 -74529954 - L1MEd LINE L1 -1662 4467 4141 828 277 33 21 chr17 14974606 14974938 -74529615 - L1ME2 LINE L1 -1 6163 5828 1034 113 0 0 chr17 14974943 14975085 -74529468 - AluSg/x SINE Alu -1 311 170 638 173 8 23 chr17 14975088 14975221 -74529332 - L1ME2 LINE L1 -345 5821 5691 761 146 0 49 chr17 14975356 14975500 -74529053 - FLAM_C SINE Alu -1 142 6 1694 49 0 0 chr17 14975661 14975865 -74528688 - L1PA3 LINE L1 -3 6152 5949 729 266 94 63 chr17 14975865 14976031 -74528522 - L1MEd LINE L1 -2222 3907 3748 1143 153 19 14 chr17 14976031 14976246 -74528307 + L1PA16 LINE L1 5951 6166 0 729 266 94 63 chr17 14976246 14976970 -74527583 - L1MEd LINE L1 -2381 3748 2989 697 189 65 47 chr17 14976983 14977152 -74527401 - MER63A DNA MER1_type 0 210 39 325 272 142 18 chr17 14977273 14977442 -74527111 - L1MEd LINE L1 -3240 2889 2700 21 36 0 0 chr17 14977442 14977470 -74527083 + AT_rich Low_complexity Low_complexity 1 28 0 969 151 0 7 chr17 14977472 14977618 -74526935 - FAM SINE Alu -23 162 18 356 252 99 90 chr17 14977638 14977915 -74526638 - L1MEd LINE L1 -3423 2706 2433 2755 138 23 19 chr17 14977915 14978387 -74526166 - MER101 LTR ERV1 0 474 1 356 252 99 90 chr17 14978387 14978685 -74525868 - L1MEd LINE L1 -3696 2433 2126 689 288 162 48 chr17 14979177 14980200 -74524353 - L1MEd LINE L1 -865 1625 385 317 274 76 61 chr17 14980286 14980483 -74524070 - L1MEd LINE L1 -5918 201 2 2089 87 69 4 chr17 14981198 14981475 -74523078 - AluSg1 SINE Alu -14 295 1 647 162 176 28 chr17 14982077 14982219 -74522334 - FRAM SINE Alu -15 161 1 320 331 58 14 chr17 14982284 14982423 -74522130 - MIR SINE MIR -102 160 16 214 254 48 32 chr17 14982595 14982646 -74521907 + L2 LINE L2 3241 3295 -18 2228 109 0 19 chr17 14982646 14982957 -74521596 + AluSc SINE Alu 1 305 -4 214 254 48 32 chr17 14982957 14982968 -74521585 + L2 LINE L2 3295 3304 -9 1339 179 6 116 chr17 14983449 14983784 -74520769 - AluJb SINE Alu -4 298 1 774 229 143 73 chr17 14983795 14983987 -74520566 - HAL1 LINE L1 -5 2502 2325 369 43 0 0 chr17 14983987 14984034 -74520519 + (TG)n Simple_repeat Simple_repeat 2 48 0 1525 172 4 0 chr17 14984041 14984279 -74520274 - AluJb SINE Alu -31 281 43 774 229 143 73 chr17 14984279 14984568 -74519985 - HAL1 LINE L1 -187 2320 1979 516 279 107 30 chr17 14984644 14985009 -74519544 - L1ME4a LINE L1 -143 5978 5586 462 293 156 33 chr17 14985347 14985681 -74518872 - L2 LINE L2 -1 3312 2938 256 172 0 17 chr17 14985772 14985830 -74518723 + LTR28 LTR ERV1 1 57 -963 * 2398 156 117 5 chr17 14985801 14986230 -74518323 + MER61D LTR ERV1 25 501 0 1960 144 28 6 chr17 14986335 14986688 -74517865 + MER46B DNA MER2_type 1 236 0 225 0 0 0 chr17 14987095 14987120 -74517433 + (TG)n Simple_repeat Simple_repeat 1 25 0 752 262 49 65 chr17 14988222 14988607 -74515946 + L2 LINE L2 1441 1819 -1495 539 189 0 0 chr17 14988607 14988697 -74515856 - MLT1A2 LTR MaLR 0 390 301 232 250 0 0 chr17 14988722 14988774 -74515779 + L2 LINE L2 2503 2554 -760 706 204 105 135 chr17 14988776 14988924 -74515629 - MLT1A2 LTR MaLR -89 301 165 1397 152 122 26 chr17 14988924 14989194 -74515359 - AluJb SINE Alu -16 296 1 706 204 105 135 chr17 14989194 14989349 -74515204 - MLT1A2 LTR MaLR -225 165 7 2696 273 93 35 chr17 14989349 14989684 -74514869 + L2 LINE L2 1808 2122 -1191 1917 96 36 66 chr17 14989684 14989986 -74514567 - AluSq SINE Alu -8 305 13 2696 273 93 35 chr17 14989986 14990432 -74514121 + L2 LINE L2 2122 2541 -772 2370 110 0 0 chr17 14990432 14990742 -74513811 - AluSx SINE Alu -2 310 1 2696 273 93 35 chr17 14990742 14991399 -74513154 + L2 LINE L2 2541 3311 -2 1642 244 86 15 chr17 14991441 14991917 -74512636 - MLT1E LTR MaLR -2 591 82 276 196 0 0 chr17 14992052 14992098 -74512455 - MLT1I LTR MaLR -6 403 358 2087 118 3 3 chr17 14992109 14992414 -74512139 - AluSg SINE Alu -5 305 1 499 342 30 20 chr17 14992483 14992682 -74511871 - MLT1I LTR MaLR -79 330 130 1997 125 0 3 chr17 14993050 14993353 -74511200 - AluSc SINE Alu -7 302 1 562 215 22 22 chr17 14993922 14994057 -74510496 + MLT1L LTR MaLR 142 276 -339 318 229 83 0 chr17 14994170 14994266 -74510287 + MLT1L LTR MaLR 510 613 -2 1127 172 43 0 chr17 14994830 14995039 -74509514 - MER20 DNA MER1_type -1 218 1 865 279 111 19 chr17 14995175 14995608 -74508945 + MLT1K LTR MaLR 1 473 -3 611 253 5 11 chr17 14995648 14995838 -74508715 - L1MA4 LINE L1 -6 6294 6106 293 194 194 0 chr17 14995839 14995906 -74508647 - MLT2B2 LTR ERVL -408 107 28 1583 197 112 97 chr17 14996205 14996614 -74507939 + MLT2B2 LTR ERVL 1 402 -113 3795 140 24 16 chr17 14996614 14997248 -74507305 + L1PB4 LINE L1 5517 6155 -1 1583 197 112 97 chr17 14997248 14997296 -74507257 + MLT2B2 LTR ERVL 402 448 -67 207 0 0 0 chr17 14997296 14997319 -74507234 + (CA)n Simple_repeat Simple_repeat 2 24 0 1583 197 112 97 chr17 14997319 14997367 -74507186 + MLT2B2 LTR ERVL 448 515 0 292 208 71 91 chr17 14998216 14998370 -74506183 + MIR SINE MIR 2 152 -110 2954 202 69 84 chr17 14998425 14999297 -74505256 - MER21B LTR ERV1 -3 860 2 1094 204 56 111 chr17 14999870 15000194 -74504359 - MLT1D LTR MaLR 0 505 162 2030 112 0 0 chr17 15000201 15000479 -74504074 + AluSg SINE Alu 1 278 -32 1963 152 101 29 chr17 15000573 15000948 -74503605 + MSTB LTR MaLR 1 402 -24 292 235 163 0 chr17 15001021 15001119 -74503434 - MLT1D LTR MaLR -391 114 1 1264 207 52 83 chr17 15002327 15002780 -74501773 - MLT1C LTR MaLR 0 467 16 6208 201 47 37 chr17 15003999 15004719 -74499834 - L1MB4 LINE L1 0 6678 5966 2055 119 0 3 chr17 15004719 15005012 -74499541 + AluSq SINE Alu 1 292 -21 6208 201 47 37 chr17 15005012 15008160 -74496393 - L1MB4 LINE L1 -712 5966 2047 2045 130 0 0 chr17 15008160 15008461 -74496092 - AluSc SINE Alu -8 301 1 6208 201 47 37 chr17 15008461 15008686 -74495867 - L1MB4 LINE L1 -4631 2047 1826 2598 213 38 55 chr17 15008689 15009835 -74494718 - L1MB4 LINE L1 -4862 1680 583 281 341 9 33 chr17 15010125 15010339 -74494214 - L1MB4 LINE L1 -6320 222 14 1009 295 103 49 chr17 15010384 15010925 -74493628 - L2 LINE L2 -13 3300 2790 2222 72 0 56 chr17 15010925 15011246 -74493307 - AluY SINE Alu -8 303 1 1009 295 103 49 chr17 15011246 15011822 -74492731 - L2 LINE L2 -523 2790 2079 194 303 132 0 chr17 15012365 15012441 -74492112 + L2 LINE L2 3187 3272 0 2134 98 3 3 chr17 15012955 15013251 -74491302 + AluSc SINE Alu 1 296 -13 298 203 81 0 chr17 15013476 15013550 -74491003 + Charlie8 DNA MER1_type 92 171 -2246 252 276 69 0 chr17 15013970 15014057 -74490496 - MIR SINE MIR -109 153 61 2126 104 0 0 chr17 15014114 15014412 -74490141 + AluSx SINE Alu 1 298 -14 3621 180 19 22 chr17 15016117 15016445 -74488108 + L1MB2 LINE L1 5404 5731 -440 2132 63 0 88 chr17 15016445 15016776 -74487777 + AluY SINE Alu 1 302 -9 3621 180 19 22 chr17 15016776 15017164 -74487389 + L1MB2 LINE L1 5731 6118 -53 207 204 0 0 chr17 15017180 15017224 -74487329 + A-rich Low_complexity Low_complexity 1 44 0 522 147 343 28 chr17 15017233 15017376 -74487177 - MER5A DNA MER1_type -1 188 1 189 274 41 41 chr17 15017501 15017574 -74486979 - MIR SINE MIR -15 247 175 1257 328 127 33 chr17 15017626 15018582 -74485971 - L2 LINE L2 -117 3196 2331 1052 110 87 83 chr17 15018582 15018800 -74485753 - MER20 DNA MER1_type 0 219 1 1257 328 127 33 chr17 15018800 15018864 -74485689 - L2 LINE L2 -982 2331 2274 5417 134 22 43 chr17 15018864 15019551 -74485002 - MER49 LTR ERV1 0 923 223 1541 163 3 49 chr17 15019551 15019858 -74484695 - AluJo SINE Alu -19 293 1 5417 134 22 43 chr17 15019858 15019931 -74484622 - MER49 LTR ERV1 -700 223 150 1867 154 3 3 chr17 15019931 15020236 -74484317 + AluJb SINE Alu 1 305 -7 5417 134 22 43 chr17 15020236 15020417 -74484136 - MER49 LTR ERV1 -773 150 1 1257 328 127 33 chr17 15020417 15020555 -74483998 - L2 LINE L2 -1039 2274 1921 2131 108 3 0 chr17 15021137 15021443 -74483110 - AluSp SINE Alu -6 307 1 532 345 99 30 chr17 15021533 15021895 -74482658 + HAL1 LINE L1 1112 1498 -1009 303 216 224 0 chr17 15021995 15022101 -74482452 - MLT1H1 LTR MaLR 0 555 421 241 235 0 0 chr17 15022283 15022334 -74482219 - MLT1I LTR MaLR -266 143 93 362 271 118 65 chr17 15022359 15022621 -74481932 + L1M4c LINE L1 2117 2392 -3992 1576 166 21 14 chr17 15022670 15022992 -74481561 + AluJo SINE Alu 1 324 0 23 0 0 0 chr17 15023126 15023149 -74481404 + AT_rich Low_complexity Low_complexity 1 23 0 4290 137 95 16 chr17 15023162 15023585 -74480968 + L1MC2 LINE L1 5485 5873 -471 1139 206 56 80 chr17 15023585 15023959 -74480594 - MLT1A1 LTR MaLR 0 365 1 4290 137 95 16 chr17 15023959 15024241 -74480312 + L1MC2 LINE L1 5873 6131 -213 255 79 0 0 chr17 15024241 15024279 -74480274 + (TG)n Simple_repeat Simple_repeat 1 38 0 * 342 0 0 0 chr17 15024278 15024316 -74480237 + (GA)n Simple_repeat Simple_repeat 1 38 0 4290 137 95 16 chr17 15024279 15024316 -74480237 + L1MC2 LINE L1 6131 6164 -180 1714 142 91 34 chr17 15024316 15024668 -74479885 + THE1C LTR MaLR 4 375 0 417 54 0 0 chr17 15024668 15024724 -74479829 + (TG)n Simple_repeat Simple_repeat 2 57 0 4290 137 95 16 chr17 15024724 15024801 -74479752 + L1MC2 LINE L1 6163 6332 -12 1752 158 74 6 chr17 15025165 15025416 -74479137 - MER7A DNA MER2_type -2693 345 68 3437 57 0 0 chr17 15025416 15025839 -74478714 - L1PA5 LINE L1 -2 6152 5730 1752 158 74 6 chr17 15025839 15025910 -74478643 - MER7A DNA MER2_type -2970 68 3 1821 148 7 3 chr17 15026390 15026687 -74477866 + AluJo SINE Alu 5 302 -10 634 277 88 56 chr17 15027053 15027564 -74476989 + HAL1b LINE L1 429 961 -387 2231 82 3 3 chr17 15027564 15027867 -74476686 - AluSc SINE Alu -6 303 1 634 277 88 56 chr17 15027867 15027911 -74476642 + HAL1b LINE L1 961 1002 -346 225 0 0 0 chr17 15028419 15028444 -74476109 + (A)n Simple_repeat Simple_repeat 1 25 0 733 249 161 42 chr17 15028492 15028846 -74475707 - LTR16A LTR ERVL -3 447 52 200 316 160 47 chr17 15029096 15029352 -74475201 - L2 LINE L2 -1980 1334 1050 326 239 160 41 chr17 15029446 15029739 -74474814 - LTR33 LTR ERVL 0 521 194 233 333 133 8 chr17 15030710 15030830 -74473723 - MIR3 SINE MIR -6 202 68 378 0 0 0 chr17 15033300 15033342 -74471211 + (CA)n Simple_repeat Simple_repeat 2 43 0 23 0 0 0 chr17 15034447 15034470 -74470083 + GC_rich Low_complexity Low_complexity 1 23 0 28 61 0 0 chr17 15035532 15035581 -74468972 + GC_rich Low_complexity Low_complexity 1 49 0 211 259 19 0 chr17 15036391 15036445 -74468108 + MIR SINE MIR 12 66 -196 1035 216 82 9 chr17 15038648 15038879 -74465674 - MIR SINE MIR -5 257 10 21 36 0 0 chr17 15040277 15040305 -74464248 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 15040422 15040443 -74464110 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 15041114 15041143 -74463410 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 15042416 15042440 -74462113 + GC_rich Low_complexity Low_complexity 1 24 0 1417 122 94 73 chr17 15043957 15044245 -74460308 - AluJo SINE Alu -18 294 1 1548 182 35 10 chr17 15044246 15044559 -74459994 - L1MC1 LINE L1 -9 6324 6004 265 241 188 80 chr17 15045033 15045145 -74459408 - MIR SINE MIR -70 192 69 1188 117 0 11 chr17 15045768 15045947 -74458606 - AluSg SINE Alu -9 303 127 308 127 18 0 chr17 15045947 15046002 -74458551 + (TG)n Simple_repeat Simple_repeat 2 57 0 992 94 0 0 chr17 15046007 15046134 -74458419 - AluSg SINE Alu -183 127 1 2210 94 3 0 chr17 15046437 15046736 -74457817 - AluSq SINE Alu -13 300 1 2351 77 3 0 chr17 15046835 15047145 -74457408 - AluSp SINE Alu -2 311 1 824 225 50 46 chr17 15047156 15047418 -74457135 - L1ME3A LINE L1 -2 6168 5906 407 306 62 0 chr17 15047425 15047569 -74456984 + Charlie8 DNA MER1_type 54 206 -2211 304 202 182 10 chr17 15048269 15048368 -74456185 - MER5C DNA MER1_type -200 124 9 2192 99 7 0 chr17 15048409 15048702 -74455851 + AluSq SINE Alu 3 297 -16 227 182 0 23 chr17 15048733 15048777 -74455776 - MER103 DNA DNA -67 99 57 342 272 67 124 chr17 15052393 15052649 -74451904 - L2 LINE L2 -19 3294 3054 1410 67 52 5 chr17 15052649 15052843 -74451710 - L1PB1 LINE L1 0 6151 5949 342 272 67 124 chr17 15052843 15052869 -74451684 - L2 LINE L2 -259 3054 3028 229 301 57 49 chr17 15052913 15053036 -74451517 - L2 LINE L2 -552 2762 2639 228 274 91 35 chr17 15053149 15053346 -74451207 - L2 LINE L2 -222 3050 2843 303 93 0 0 chr17 15054809 15054852 -74449701 + (CAT)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr17 15054854 15054875 -74449678 + AT_rich Low_complexity Low_complexity 1 21 0 276 329 2 30 chr17 15055068 15055220 -74449333 + MIR SINE MIR 3 147 -61 2280 94 0 7 chr17 15055765 15056072 -74448481 - AluSg SINE Alu -5 305 1 616 164 0 9 chr17 15057274 15057384 -74447169 - FLAM_A SINE Alu -1 141 33 1653 166 7 7 chr17 15057493 15057770 -74446783 - AluJo SINE Alu -25 287 11 1320 204 57 52 chr17 15058108 15058515 -74446038 - LTR37A LTR ERV1 0 426 18 315 161 0 0 chr17 15058872 15058928 -74445625 + (TG)n Simple_repeat Simple_repeat 1 56 0 197 32 0 32 chr17 15059357 15059388 -74445165 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2305 84 0 7 chr17 15059506 15059816 -74444737 + AluSq SINE Alu 4 311 -2 195 245 57 0 chr17 15060619 15060672 -74443881 - L2 LINE L2 0 3272 3217 759 181 0 21 chr17 15061586 15061730 -74442823 + FLAM_C SINE Alu 3 143 0 936 136 0 27 chr17 15062160 15062344 -74442209 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 309 276 67 0 chr17 15062344 15062449 -74442104 + L1M4 LINE L1 3073 3184 -2962 335 141 90 13 chr17 15062868 15062946 -74441607 - MIR SINE MIR -99 163 80 305 293 126 17 chr17 15063195 15063369 -74441184 - MIR3 SINE MIR -11 197 5 306 0 0 0 chr17 15063417 15063451 -74441102 + (TG)n Simple_repeat Simple_repeat 2 35 0 234 62 0 0 chr17 15065689 15065721 -74438832 + (T)n Simple_repeat Simple_repeat 1 32 0 2156 88 0 7 chr17 15066052 15066357 -74438196 + AluSg SINE Alu 1 303 -7 1115 161 39 222 chr17 15066357 15066686 -74437867 - MER31A LTR ERV1 -43 423 220 1724 83 29 4 chr17 15066686 15066927 -74437626 - AluSp SINE Alu -66 247 1 1115 161 39 222 chr17 15066927 15067111 -74437442 - MER31A LTR ERV1 -246 220 4 1649 168 43 40 chr17 15067143 15067212 -74437341 - L1MC1 LINE L1 0 6333 6266 752 207 35 12 chr17 15067212 15067381 -74437172 - FAM SINE Alu -2 173 1 1649 168 43 40 chr17 15067381 15067663 -74436890 - L1MC1 LINE L1 -67 6266 5981 260 108 0 0 chr17 15068021 15068058 -74436495 - MIR SINE MIR -63 145 109 259 150 0 0 chr17 15068140 15068180 -74436373 - MIR SINE MIR -63 145 106 2147 109 3 0 chr17 15068279 15068582 -74435971 + AluSx SINE Alu 1 304 -8 522 199 45 58 chr17 15068702 15068858 -74435695 + L1ME1 LINE L1 6011 6164 -2 191 146 24 0 chr17 15069681 15069722 -74434831 + CT-rich Low_complexity Low_complexity 1 42 0 829 157 27 0 chr17 15069722 15069869 -74434684 - MSTC LTR MaLR -50 378 228 1973 115 3 33 chr17 15070199 15070503 -74434050 - AluSx SINE Alu -17 295 1 392 261 106 37 chr17 15070816 15070977 -74433576 - MER5B DNA MER1_type -1 177 6 2008 115 3 3 chr17 15071004 15071290 -74433263 - AluSc SINE Alu -23 286 1 2036 138 0 0 chr17 15071298 15071609 -74432944 - AluSp SINE Alu -2 311 1 245 301 29 48 chr17 15072372 15072502 -74432051 + MIR SINE MIR 40 170 -72 2589 147 40 27 chr17 15072993 15073449 -74431104 + MER31A LTR ERV1 3 467 -18 2260 97 0 0 chr17 15073449 15073749 -74430804 - AluSx SINE Alu -12 300 1 2589 147 40 27 chr17 15073749 15073769 -74430784 + MER31A LTR ERV1 467 485 0 566 291 64 43 chr17 15074298 15074532 -74430021 - MIR SINE MIR -1 261 23 184 289 0 22 chr17 15075197 15075242 -74429311 + L2 LINE L2 3210 3253 -19 762 317 33 12 chr17 15075428 15075671 -74428882 - MIR SINE MIR 0 262 15 3262 167 4 51 chr17 15075754 15075828 -74428725 - L1MA7 LINE L1 -21 6270 6194 2351 78 0 3 chr17 15075828 15076135 -74428418 + AluSc SINE Alu 1 306 -3 3262 167 4 51 chr17 15076135 15076743 -74427810 - L1MA7 LINE L1 -97 6194 5620 1947 129 0 10 chr17 15076756 15077066 -74427487 - AluSq SINE Alu -6 307 1 500 184 7 52 chr17 15077107 15077243 -74427310 - L1PA13 LINE L1 -8 6155 6026 26 0 0 0 chr17 15078591 15078617 -74425936 + AT_rich Low_complexity Low_complexity 1 26 0 2127 104 10 0 chr17 15079106 15079413 -74425140 - AluSp SINE Alu 0 313 4 360 0 0 0 chr17 15082357 15082397 -74422156 + (CA)n Simple_repeat Simple_repeat 1 40 0 423 258 134 73 chr17 15082821 15083297 -74421256 + MER113 DNA MER1_type? 15 519 -2 2094 82 20 17 chr17 15083609 15083902 -74420651 - AluSp SINE Alu -18 295 2 381 301 0 48 chr17 15083939 15084000 -74420553 + MER5B DNA MER1_type 1 63 -115 1582 170 24 0 chr17 15084000 15084294 -74420259 + AluJb SINE Alu 1 301 -11 381 301 0 48 chr17 15084294 15084418 -74420135 + MER5B DNA MER1_type 63 177 -1 611 200 200 0 chr17 15084425 15084580 -74419973 + MER5A DNA MER1_type 2 187 -2 762 291 125 16 chr17 15084790 15085213 -74419340 - Tigger8 DNA MER2_type 0 666 198 2461 63 0 0 chr17 15085408 15085710 -74418843 + AluY SINE Alu 1 302 -9 252 305 226 11 chr17 15086038 15086228 -74418325 - L2 LINE L2 0 3313 3083 2098 104 0 7 chr17 15086435 15086743 -74417810 + AluSc SINE Alu 1 306 -3 1063 314 122 24 chr17 15086786 15087424 -74417129 + L2 LINE L2 2263 2963 -351 830 239 150 69 chr17 15087520 15087999 -74416554 + MLT1G1 LTR MaLR 26 595 0 345 247 135 39 chr17 15088055 15088233 -74416320 + L2 LINE L2 3119 3313 0 998 199 71 42 chr17 15088577 15088877 -74415676 - MLT1B LTR MaLR -134 256 1 242 340 121 14 chr17 15089221 15089436 -74415117 - L2 LINE L2 -609 2705 2468 1966 129 0 7 chr17 15089565 15089867 -74414686 + AluSg SINE Alu 1 300 -10 33 66 0 0 chr17 15090067 15090128 -74414425 + AT_rich Low_complexity Low_complexity 1 61 0 1982 212 151 0 chr17 15090312 15090364 -74414189 - MLT2B2 LTR ERVL 0 515 472 270 0 0 0 chr17 15090364 15090394 -74414159 + (CA)n Simple_repeat Simple_repeat 2 31 0 1982 212 151 0 chr17 15090394 15090785 -74413768 - MLT2B2 LTR ERVL -43 472 5 1685 93 93 50 chr17 15091187 15091465 -74413088 - AluSg SINE Alu -20 290 1 467 360 40 9 chr17 15091487 15091712 -74412841 + MIR SINE MIR 25 256 -6 3152 157 13 50 chr17 15092767 15093154 -74411399 - MLT2B1 LTR ERVL 0 520 157 1941 96 6 87 chr17 15093154 15093489 -74411064 - AluSp SINE Alu -5 308 1 3152 157 13 50 chr17 15093489 15093641 -74410912 - MLT2B1 LTR ERVL -363 157 1 285 114 0 0 chr17 15094254 15094298 -74410255 - L1ME3A LINE L1 -217 5953 5910 312 247 71 0 chr17 15094308 15094393 -74410160 - L1MC4 LINE L1 -1337 6705 6615 1144 183 15 10 chr17 15094420 15094622 -74409931 - AluJo SINE Alu -23 289 87 296 248 137 20 chr17 15094629 15094782 -74409771 - L1ME3A LINE L1 -262 5902 5732 507 224 145 22 chr17 15094787 15094966 -74409587 + L2 LINE L2 3113 3313 0 209 299 17 86 chr17 15095091 15095208 -74409345 - MIR SINE MIR -67 141 33 1709 68 12 92 chr17 15095528 15095778 -74408775 - MER30 DNA MER1_type 0 230 1 342 138 0 0 chr17 15095778 15095836 -74408717 + (TCCCC)n Simple_repeat Simple_repeat 4 61 0 24 0 0 0 chr17 15095926 15095950 -74408603 + AT_rich Low_complexity Low_complexity 1 24 0 509 254 61 87 chr17 15096389 15096622 -74407931 - L1ME4a LINE L1 -4 6117 5892 2186 120 0 7 chr17 15096622 15096930 -74407623 - AluSg SINE Alu -4 306 1 509 254 61 87 chr17 15096930 15097007 -74407546 - L1ME4a LINE L1 -229 5892 5815 386 266 55 0 chr17 15097043 15097171 -74407382 - L1ME4a LINE L1 -292 5829 5695 2301 96 3 0 chr17 15097196 15097489 -74407064 - AluSg SINE Alu -16 294 1 1398 128 0 15 chr17 15097809 15098013 -74406540 + AluSg/x SINE Alu 98 298 -14 431 365 75 11 chr17 15098198 15098464 -74406089 + L2 LINE L2 2684 2966 -348 2700 139 7 19 chr17 15098617 15099033 -74405520 - MSTC LTR MaLR -17 411 1 389 297 84 19 chr17 15099619 15099774 -74404779 - MIR3 SINE MIR -13 195 31 2389 132 16 24 chr17 15099785 15100163 -74404390 - THE1C LTR MaLR 0 375 1 1786 132 3 47 chr17 15100532 15100850 -74403703 - AluJo SINE Alu 0 305 1 800 228 33 0 chr17 15100850 15101030 -74403523 - L1MB2 LINE L1 -346 5825 5640 2303 105 3 0 chr17 15101997 15102303 -74402250 + AluSx SINE Alu 1 307 -5 464 274 7 7 chr17 15102320 15102466 -74402087 - LTR16C LTR ERVL -1 490 345 255 247 99 25 chr17 15102745 15102826 -74401727 - L2 LINE L2 -21 3251 3165 273 57 0 0 chr17 15103272 15103307 -74401246 + (CA)n Simple_repeat Simple_repeat 1 35 0 232 216 0 0 chr17 15103320 15103371 -74401182 + L1MC4 LINE L1 6653 6703 -1339 * 605 298 70 26 chr17 15103348 15103734 -74400819 - L1ME4a LINE L1 -157 5964 5562 2442 85 0 3 chr17 15103799 15104105 -74400448 - AluY SINE Alu -6 305 1 2277 113 3 10 chr17 15104271 15104581 -74399972 - AluSx SINE Alu -3 309 2 25 0 0 0 chr17 15104637 15104662 -74399891 + AT_rich Low_complexity Low_complexity 1 25 0 2308 93 33 0 chr17 15104785 15105087 -74399466 - AluSx SINE Alu 0 312 1 612 238 60 24 chr17 15105312 15105480 -74399073 - FAM SINE Alu -1 174 1 1272 274 58 17 chr17 15106652 15107068 -74397485 - LTR16C LTR ERVL -1 490 58 224 184 0 0 chr17 15107855 15107893 -74396660 - L2 LINE L2 -7 3306 3269 2313 173 21 21 chr17 15107905 15108379 -74396174 - Charlie1 DNA MER1_type -16 2745 2272 264 122 0 0 chr17 15108401 15108442 -74396111 + (TCCC)n Simple_repeat Simple_repeat 2 42 0 202 143 29 0 chr17 15108443 15108478 -74396075 + CT-rich Low_complexity Low_complexity 1 36 0 1975 102 10 33 chr17 15108482 15108786 -74395767 - AluSc SINE Alu -12 297 1 2966 146 49 10 chr17 15108799 15109133 -74395420 - L1MB3 LINE L1 -77 6106 5744 234 62 0 0 chr17 15109133 15109165 -74395388 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2966 146 49 10 chr17 15109165 15109344 -74395209 - L1MB3 LINE L1 -439 5744 5573 2322 168 70 17 chr17 15109344 15109815 -74394738 - Charlie1 DNA MER1_type -483 2278 1783 284 319 11 11 chr17 15109833 15109924 -74394629 - Charlie1 DNA MER1_type -2670 91 1 245 261 37 102 chr17 15110045 15110119 -74394434 - L1ME4a LINE L1 -57 6064 5987 2506 59 0 0 chr17 15110119 15110423 -74394130 - AluY SINE Alu -6 305 2 245 261 37 102 chr17 15110423 15110650 -74393903 - L1ME4a LINE L1 -134 5987 5783 2250 108 0 13 chr17 15110650 15110957 -74393596 - AluSg SINE Alu -7 303 1 245 261 37 102 chr17 15110957 15110976 -74393577 - L1ME4a LINE L1 -338 5783 5764 1847 174 6 13 chr17 15111016 15111327 -74393226 - AluJb SINE Alu -3 309 1 2037 148 0 13 chr17 15111341 15111652 -74392901 - AluSx SINE Alu -5 307 1 1619 145 121 0 chr17 15112422 15112704 -74391849 - L1MB3 LINE L1 -2 6181 5866 2182 110 0 10 chr17 15113207 15113507 -74391046 - AluSq SINE Alu -16 297 1 554 289 70 10 chr17 15113664 15113865 -74390688 - MIR SINE MIR -25 237 25 347 252 82 15 chr17 15115124 15115259 -74389294 + HAL1b LINE L1 222 365 -983 1720 153 34 20 chr17 15115567 15115861 -74388692 - AluJo SINE Alu -13 299 2 387 194 310 0 chr17 15116532 15116687 -74387866 + L2 LINE L2 3111 3313 0 2116 110 3 47 chr17 15116734 15117052 -74387501 - AluSx SINE Alu -8 304 1 2306 96 3 0 chr17 15117544 15117845 -74386708 + AluSp SINE Alu 1 302 -11 236 30 30 0 chr17 15118172 15118205 -74386348 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr17 15118276 15118308 -74386245 + AT_rich Low_complexity Low_complexity 1 32 0 995 318 30 17 chr17 15118499 15118902 -74385651 - L1MC4a LINE L1 -1883 5925 5518 2146 109 7 3 chr17 15119197 15119491 -74385062 - AluSg SINE Alu -15 295 1 195 129 0 0 chr17 15121246 15121277 -74383276 + (A)n Simple_repeat Simple_repeat 1 31 0 205 129 0 0 chr17 15121374 15121405 -74383148 - L2 LINE L2 -20 3293 3263 3043 160 12 36 chr17 15121532 15121590 -74382963 - L1MB4 LINE L1 0 6180 6122 2383 88 0 0 chr17 15121590 15121886 -74382667 - AluSq SINE Alu -17 296 1 3043 160 12 36 chr17 15121886 15122389 -74382164 - L1MB4 LINE L1 -58 6122 5632 344 273 153 38 chr17 15123717 15123900 -74380653 - MIR SINE MIR -3 259 56 2799 231 60 70 chr17 15123984 15124934 -74379619 + L1MA5 LINE L1 1989 2928 -4637 207 69 0 0 chr17 15124934 15124963 -74379590 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 5064 173 51 23 chr17 15124963 15126457 -74378096 + L1MA5 LINE L1 6180 7719 0 318 348 83 20 chr17 15126468 15126721 -74377832 - LTR16C LTR ERVL -68 423 155 2429 72 0 0 chr17 15126948 15127241 -74377312 - AluSc SINE Alu -16 293 1 659 249 5 85 chr17 15127343 15127544 -74377009 + MER5A DNA MER1_type 3 187 -2 444 330 66 19 chr17 15127607 15127819 -74376734 - MIR SINE MIR -16 246 25 530 209 7 0 chr17 15128208 15128347 -74376206 + (TGG)n Simple_repeat Simple_repeat 2 141 0 330 263 0 0 chr17 15128383 15128516 -74376037 + (TGG)n Simple_repeat Simple_repeat 2 134 0 271 304 294 0 chr17 15128626 15128810 -74375743 - MIR SINE MIR -24 238 1 305 307 13 0 chr17 15129555 15129630 -74374923 + MER5C DNA MER1_type 1 76 -248 247 330 11 0 chr17 15129667 15129758 -74374795 - Charlie3 DNA MER1_type -1106 1604 1513 690 198 6 64 chr17 15129813 15129906 -74374647 + MIR SINE MIR 15 97 -165 2217 87 35 3 chr17 15129906 15130195 -74374358 - AluSc SINE Alu -11 298 1 690 198 6 64 chr17 15130195 15130258 -74374295 + MIR SINE MIR 97 162 -100 225 0 0 0 chr17 15130281 15130306 -74374247 + (TG)n Simple_repeat Simple_repeat 1 25 0 195 162 0 0 chr17 15130371 15130408 -74374145 + (TAA)n Simple_repeat Simple_repeat 1 37 0 550 86 49 0 chr17 15130506 15130587 -74373966 - L1MB3 LINE L1 -215 5968 5884 237 200 0 0 chr17 15130829 15130874 -74373679 + L2 LINE L2 3267 3311 -2 351 0 0 0 chr17 15131047 15131086 -74373467 + (TG)n Simple_repeat Simple_repeat 2 40 0 973 74 0 0 chr17 15131374 15131495 -74373058 - AluSc SINE Alu -9 300 180 23 0 0 0 chr17 15131645 15131668 -74372885 + AT_rich Low_complexity Low_complexity 1 23 0 2718 181 43 2 chr17 15131668 15132176 -74372377 - L1MB3 LINE L1 -3 6180 5652 228 242 9 16 chr17 15132263 15132337 -74372216 + CT-rich Low_complexity Low_complexity 2 54 0 2159 99 27 3 chr17 15132409 15132723 -74371830 - AluSp SINE Alu 0 313 1 769 189 8 0 chr17 15133204 15133331 -74371222 - AluSq/x SINE Alu -184 129 2 791 154 70 32 chr17 15133332 15133430 -74371123 - L1MB3 LINE L1 -689 5489 5381 231 88 0 0 chr17 15133430 15133464 -74371089 + (TG)n Simple_repeat Simple_repeat 2 35 0 791 154 70 32 chr17 15133464 15133521 -74371032 - L1MB3 LINE L1 -797 5381 5328 1300 234 109 46 chr17 15133531 15133734 -74370819 - Charlie4a DNA MER1_type -1460 501 312 2166 124 3 0 chr17 15133734 15134040 -74370513 - AluSq SINE Alu -6 307 1 1300 234 109 46 chr17 15134040 15134293 -74370260 - Charlie4a DNA MER1_type -1649 312 16 1834 178 55 27 chr17 15134347 15134712 -74369841 + THE1C LTR MaLR 1 375 0 9757 132 40 34 chr17 15134714 15136283 -74368270 + MSTA-int LTR MaLR 3 1580 0 1848 145 177 30 chr17 15136283 15136656 -74367897 + MSTA LTR MaLR 1 428 0 424 309 14 29 chr17 15136663 15136802 -74367751 - LTR33 LTR ERVL -282 239 103 369 235 0 51 chr17 15137004 15137102 -74367451 - MER103 DNA DNA -20 146 54 376 195 13 13 chr17 15137286 15137363 -74367190 - MIR SINE MIR -78 130 54 969 128 0 0 chr17 15137653 15137794 -74366759 - AluSg/x SINE Alu 0 310 170 253 349 92 46 chr17 15138030 15138182 -74366371 - MIR SINE MIR -66 196 38 198 292 159 35 chr17 15138476 15138589 -74365964 + MIR3 SINE MIR 35 161 -47 2362 80 0 29 chr17 15138644 15138958 -74365595 - AluY SINE Alu -6 305 1 2218 111 105 3 chr17 15138975 15139307 -74365246 - L1PB2 LINE L1 -3 6148 5783 359 165 10 29 chr17 15139324 15139427 -74365126 + (TA)n Simple_repeat Simple_repeat 1 101 0 385 191 0 0 chr17 15139441 15139504 -74365049 - L1PB2 LINE L1 -371 5780 5718 316 252 86 22 chr17 15139690 15139829 -74364724 - L1MC/D LINE L1 -2343 5465 5318 379 328 93 34 chr17 15140062 15140330 -74364223 - L1MC/D LINE L1 -1092 5054 4771 237 244 0 110 chr17 15140660 15140742 -74363811 - MIR3 SINE MIR -125 83 10 271 233 70 0 chr17 15140792 15140878 -74363675 - MIR SINE MIR -14 248 157 229 189 0 0 chr17 15141854 15141891 -74362662 - L1PA12 LINE L1 -5867 1714 1678 185 344 52 31 chr17 15141960 15142056 -74362497 - MIR SINE MIR -102 160 63 529 177 38 247 chr17 15142148 15142509 -74362044 - MER57A LTR ERV1 -16 387 67 2505 108 19 35 chr17 15142509 15142879 -74361674 - THE1B LTR MaLR 0 364 1 529 177 38 247 chr17 15142879 15142933 -74361620 - MER57A LTR ERV1 -336 67 3 890 294 58 46 chr17 15142936 15143779 -74360774 - MER31-int LTR ERV1 -390 7147 6232 1329 265 38 67 chr17 15144173 15144832 -74359721 - MER31-int LTR ERV1 -768 6203 2423 2663 190 21 59 chr17 15144961 15145233 -74359320 - MER31-int LTR ERV1 -1716 5821 5540 2544 65 3 0 chr17 15145233 15145543 -74359010 - AluY SINE Alu 0 311 1 2663 190 21 59 chr17 15145543 15145934 -74358619 - MER31-int LTR ERV1 -1997 5540 5183 2472 224 75 90 chr17 15145913 15147023 -74357530 - MER31-int LTR ERV1 -1889 3047 1955 * 2263 100 13 7 chr17 15147023 15147333 -74357220 - AluSx SINE Alu 0 312 1 2472 224 75 90 chr17 15147333 15147425 -74357128 - MER31-int LTR ERV1 -2981 1955 1863 332 206 0 15 chr17 15147431 15147499 -74357054 - MER34 LTR ERV1 0 542 476 434 161 86 43 chr17 15147499 15147592 -74356961 - MER34 LTR ERV1 -305 237 141 2592 49 0 0 chr17 15147733 15148037 -74356516 + AluY SINE Alu 1 304 -7 1294 179 102 37 chr17 15148222 15148603 -74355950 - MER31-int LTR ERV1 -3470 1466 1061 894 135 18 27 chr17 15148628 15149062 -74355491 + CT-rich Low_complexity Low_complexity 1 430 0 639 183 0 35 chr17 15149062 15149177 -74355376 - L1PB4 LINE L1 -17 6139 6029 958 163 67 161 chr17 15150338 15150699 -74353854 - MER57A LTR ERV1 0 403 77 486 262 199 32 chr17 15150997 15151344 -74353209 - MARNA DNA Mariner -143 443 39 2679 162 21 21 chr17 15151347 15151780 -74352773 + Tigger2a DNA MER2_type 2 434 0 539 246 29 29 chr17 15151834 15151972 -74352581 - L2 LINE L2 -1168 2146 2009 433 248 0 0 chr17 15152880 15152981 -74351572 + MIR SINE MIR 156 256 -6 228 323 39 24 chr17 15153224 15153351 -74351202 + LTR16C LTR ERVL 266 394 -97 273 189 0 27 chr17 15153445 15153519 -74351034 + (TTA)n Simple_repeat Simple_repeat 2 73 0 454 328 98 26 chr17 15153521 15154061 -74350492 + HAL1b LINE L1 197 775 -573 213 108 0 0 chr17 15154274 15154311 -74350242 + (A)n Simple_repeat Simple_repeat 1 37 0 901 345 53 45 chr17 15154413 15154484 -74350069 + L2 LINE L2 829 898 -2416 2110 145 0 3 chr17 15154484 15154794 -74349759 - AluSx SINE Alu -3 309 1 901 345 53 45 chr17 15154794 15155479 -74349074 + L2 LINE L2 898 1591 -1723 2606 146 33 15 chr17 15155570 15156029 -74348524 + L1MA8 LINE L1 5803 6269 -22 21 36 0 0 chr17 15156041 15156069 -74348484 + AT_rich Low_complexity Low_complexity 1 28 0 2174 118 0 3 chr17 15156168 15156465 -74348088 - AluSg SINE Alu -14 296 1 685 180 31 0 chr17 15156466 15156594 -74347959 - MER20 DNA MER1_type -18 201 70 650 314 44 50 chr17 15156619 15156982 -74347571 + L2 LINE L2 2353 2713 -601 226 245 0 39 chr17 15157508 15157610 -74346943 + CT-rich Low_complexity Low_complexity 3 100 0 2181 125 3 6 chr17 15157807 15158119 -74346434 - AluSx SINE Alu -1 311 1 2453 57 10 3 chr17 15158458 15158758 -74345795 + AluY SINE Alu 3 304 -7 24 0 0 0 chr17 15158758 15158782 -74345771 + AT_rich Low_complexity Low_complexity 1 24 0 225 65 0 0 chr17 15158857 15158888 -74345665 + (CA)n Simple_repeat Simple_repeat 2 32 0 231 270 0 27 chr17 15159263 15159337 -74345216 - MIR SINE MIR -101 161 90 232 289 58 41 chr17 15159937 15160058 -74344495 + L2 LINE L2 3133 3255 -17 453 339 27 22 chr17 15160115 15160298 -74344255 + MIR3 SINE MIR 4 187 -21 235 307 133 35 chr17 15160374 15160549 -74344004 - MIR3 SINE MIR -58 150 2 376 294 145 48 chr17 15160593 15160821 -74343732 - L3 LINE CR1 -26 1551 1302 1178 166 9 19 chr17 15162145 15162356 -74342197 + AluJo SINE Alu 84 292 -20 2067 114 0 0 chr17 15162569 15162892 -74341661 - AluSc SINE Alu 0 323 1 2787 19 0 0 chr17 15163437 15163744 -74340809 + AluYb8 SINE Alu 1 307 -11 299 209 52 35 chr17 15163980 15164152 -74340401 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 402 132 84 24 chr17 15164027 15164363 -74340190 + (TA)n Simple_repeat Simple_repeat 1 356 0 256 97 97 10 chr17 15164405 15164508 -74340045 + (TA)n Simple_repeat Simple_repeat 1 112 0 406 144 17 56 chr17 15164582 15164762 -74339791 + (CATA)n Simple_repeat Simple_repeat 3 175 0 212 174 38 98 chr17 15164762 15164894 -74339659 + (CATAT)n Simple_repeat Simple_repeat 5 128 0 457 177 0 0 chr17 15164906 15164985 -74339568 + AluJ/FRAM SINE Alu 219 297 -15 209 208 21 21 chr17 15165209 15165257 -74339296 + L2 LINE L2 3223 3270 -2 193 56 28 28 chr17 15165306 15165342 -74339211 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr17 15165411 15165432 -74339121 + AT_rich Low_complexity Low_complexity 1 21 0 2109 113 0 7 chr17 15165717 15166068 -74338485 + AluSg SINE Alu 1 310 0 223 205 0 0 chr17 15166382 15166421 -74338132 + MIR SINE MIR 32 70 -138 475 319 24 43 chr17 15166509 15166612 -74337941 - MIR SINE MIR -2 260 162 2637 129 95 5 chr17 15166612 15167055 -74337498 - L1MA9 LINE L1 0 6312 5830 475 319 24 43 chr17 15167055 15167161 -74337392 - MIR SINE MIR -100 162 55 2285 105 3 0 chr17 15168581 15168886 -74335667 + AluSp SINE Alu 1 306 -7 339 65 0 0 chr17 15168919 15168965 -74335588 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 723 270 39 80 chr17 15168970 15169359 -74335194 - L1ME4a LINE L1 -88 6033 5661 365 270 65 100 chr17 15170085 15170407 -74334146 - HAL1 LINE L1 -1164 1343 1048 1837 102 14 53 chr17 15170407 15170548 -74334005 - AluSp SINE Alu -39 274 148 2333 71 16 16 chr17 15170548 15170857 -74333696 - AluSp SINE Alu -4 309 1 1837 102 14 53 chr17 15170857 15170999 -74333554 - AluSp SINE Alu -165 148 2 365 270 65 100 chr17 15170999 15171258 -74333295 - HAL1 LINE L1 -1459 1048 782 286 192 144 29 chr17 15171682 15171786 -74332767 - L1MC4 LINE L1 0 8042 7927 184 204 41 20 chr17 15172103 15172152 -74332401 - L2 LINE L2 -1 3312 3263 1464 192 87 7 chr17 15172555 15173024 -74331529 + AluJo SINE Alu 1 312 0 267 108 31 31 chr17 15173024 15173078 -74331475 + GA-rich Low_complexity Low_complexity 10 66 0 3171 47 0 0 chr17 15174024 15174387 -74330166 - L1PA5 LINE L1 -2 6152 5790 544 298 82 20 chr17 15174984 15175276 -74329277 - HAL1 LINE L1 -5 2502 2193 2358 89 0 10 chr17 15175430 15175733 -74328820 + AluSg SINE Alu 2 301 -9 420 192 64 16 chr17 15175832 15175957 -74328596 - HAL1 LINE L1 -354 2153 2023 389 322 71 19 chr17 15176095 15176362 -74328191 - HAL1 LINE L1 -703 1804 1524 412 284 69 76 chr17 15176547 15176663 -74327890 - HAL1 LINE L1 -1161 1346 1231 2391 57 0 10 chr17 15176663 15176962 -74327591 + AluY SINE Alu 1 296 -15 412 284 69 76 chr17 15176962 15177120 -74327433 - HAL1 LINE L1 -1276 1231 1074 232 274 0 27 chr17 15177284 15177345 -74327208 + CT-rich Low_complexity Low_complexity 2 62 -10 2615 58 0 7 chr17 15177345 15177655 -74326898 - AluY SINE Alu -3 308 1 232 274 0 27 chr17 15177655 15177666 -74326887 + CT-rich Low_complexity Low_complexity 62 72 0 227 189 90 72 chr17 15177666 15177777 -74326776 - HAL1 LINE L1 -204 2303 2191 336 326 68 52 chr17 15177777 15178263 -74326290 - MLT1H LTR MaLR 0 549 15 1212 229 77 61 chr17 15178321 15178421 -74326132 - HAL1 LINE L1 -419 2088 1991 2063 77 0 0 chr17 15178421 15178669 -74325884 + AluY SINE Alu 39 286 -25 198 0 0 0 chr17 15178670 15178692 -74325861 + (TA)n Simple_repeat Simple_repeat 2 23 0 1212 229 77 61 chr17 15178692 15179099 -74325454 - HAL1 LINE L1 -515 1992 1571 533 287 28 0 chr17 15179186 15179329 -74325224 + MER103 DNA DNA 18 164 -2 875 283 33 39 chr17 15179755 15180175 -74324378 + MLT1K LTR MaLR 76 561 -27 2363 93 3 10 chr17 15180793 15181103 -74323450 - AluSx SINE Alu -4 308 1 261 210 0 0 chr17 15181438 15181500 -74323053 + (CA)n Simple_repeat Simple_repeat 1 62 0 447 304 72 56 chr17 15181996 15182410 -74322143 + L2 LINE L2 2883 3303 -10 1505 138 53 0 chr17 15182553 15182799 -74321754 + MLT2C2 LTR ERVL 1 259 -205 655 105 0 0 chr17 15182799 15182885 -74321668 + AluY SINE Alu 211 296 -15 902 139 58 52 chr17 15182885 15183057 -74321496 + MLT2C2 LTR ERVL 252 424 -40 563 335 24 5 chr17 15183078 15183290 -74321263 - MIR SINE MIR -38 224 9 737 193 77 11 chr17 15183590 15183771 -74320782 - MER33 DNA MER1_type -27 336 144 855 210 5 11 chr17 15183781 15183974 -74320579 - MER33 DNA MER1_type -250 74 1 206 237 0 88 chr17 15185307 15185421 -74319132 + T-rich Low_complexity Low_complexity 5 108 0 384 322 17 40 chr17 15186484 15186661 -74317892 + MIR SINE MIR 20 192 -70 2189 103 3 28 chr17 15187205 15187525 -74317028 - AluSp SINE Alu -1 312 1 488 321 67 5 chr17 15187546 15187739 -74316814 - MIR SINE MIR -44 218 14 435 204 8 15 chr17 15188393 15188525 -74316028 + CT-rich Low_complexity Low_complexity 2 132 0 464 259 130 78 chr17 15188539 15188976 -74315577 - HAL1 LINE L1 -6 2501 2042 1925 137 0 0 chr17 15188995 15189272 -74315281 + AluSx SINE Alu 28 304 -8 1199 265 21 13 chr17 15189310 15189683 -74314870 - HAL1 LINE L1 -604 1903 1528 1044 271 108 85 chr17 15189693 15190105 -74314448 - HAL1 LINE L1 -1051 1456 1055 2151 126 3 3 chr17 15190105 15190414 -74314139 - AluSg SINE Alu 0 310 2 1044 271 108 85 chr17 15190414 15191125 -74313428 - HAL1 LINE L1 -1452 1055 308 387 291 33 14 chr17 15191214 15191427 -74313126 - HAL1 LINE L1 -604 1903 1687 325 290 30 91 chr17 15191479 15191710 -74312843 - HAL1 LINE L1 -2290 217 1 233 314 0 0 chr17 15192034 15192120 -74312433 + CT-rich Low_complexity Low_complexity 3 88 0 412 214 36 0 chr17 15192214 15192298 -74312255 - MER5A DNA MER1_type -77 112 26 2336 105 3 3 chr17 15192382 15192688 -74311865 - AluSx SINE Alu -6 306 1 262 33 0 0 chr17 15194780 15194810 -74309743 - MSTB LTR MaLR -17 411 382 2349 84 7 3 chr17 15194811 15195120 -74309433 + AluSx SINE Alu 1 310 -2 2420 144 12 27 chr17 15195120 15195522 -74309031 - MSTB LTR MaLR -30 396 1 490 331 103 0 chr17 15195571 15195746 -74308807 - MER91A DNA MER1_type -3 193 1 1703 179 23 10 chr17 15196816 15197117 -74307436 - AluJo SINE Alu -7 305 1 25 31 0 0 chr17 15197249 15197281 -74307272 + AT_rich Low_complexity Low_complexity 1 32 0 467 251 29 58 chr17 15198193 15198364 -74306189 - MIR3 SINE MIR -9 199 34 669 255 53 85 chr17 15198373 15198449 -74306104 - MER113 DNA MER1_type? -5 516 439 2183 113 3 7 chr17 15198449 15198751 -74305802 + AluSq SINE Alu 6 306 -7 669 255 53 85 chr17 15198751 15198992 -74305561 - MER113 DNA MER1_type? -82 439 209 1464 200 128 19 chr17 15198998 15199358 -74305195 - MLT1F1 LTR MaLR 0 567 169 467 230 39 34 chr17 15199390 15199568 -74304985 - MER113 DNA MER1_type? -342 179 1 628 189 39 128 chr17 15199831 15199920 -74304633 - HAL1 LINE L1 -1324 1183 1088 2091 124 3 0 chr17 15199920 15200218 -74304335 + AluSq SINE Alu 3 301 -12 628 189 39 128 chr17 15200218 15200409 -74304144 - HAL1 LINE L1 -1419 1088 928 197 298 123 0 chr17 15200757 15200814 -74303739 - L2 LINE L2 -40 3232 3169 2506 107 107 13 chr17 15200848 15201239 -74303314 - MSTA LTR MaLR 0 428 1 240 293 158 15 chr17 15201884 15202017 -74302536 + MIR3 SINE MIR 28 179 -29 663 249 50 33 chr17 15202383 15202425 -74302128 + MER5A DNA MER1_type 6 46 -143 1671 199 51 14 chr17 15202425 15202777 -74301776 - MLT1A1 LTR MaLR 0 365 1 663 249 50 33 chr17 15202777 15202915 -74301638 + MER5A DNA MER1_type 46 189 0 304 255 29 59 chr17 15202968 15203070 -74301483 - MER5A DNA MER1_type -75 114 16 343 262 73 37 chr17 15203099 15203263 -74301290 + MIR3 SINE MIR 33 202 -6 7725 49 0 0 chr17 15204587 15205629 -74298924 - L1PA7 LINE L1 -2 6152 5112 514 313 129 17 chr17 15205639 15206091 -74298462 - L1ME LINE L1 -301 5820 5319 4013 148 22 53 chr17 15206102 15206839 -74297714 - L1MC1 LINE L1 -5 6328 5615 1746 184 39 39 chr17 15206868 15207232 -74297321 - MLT1A1 LTR MaLR -1 364 1 22 35 0 0 chr17 15208878 15208907 -74295646 + AT_rich Low_complexity Low_complexity 1 29 0 1374 158 4 23 chr17 15208954 15209220 -74295333 + L1MB5 LINE L1 5567 5827 -347 7396 66 9 0 chr17 15209220 15210372 -74294181 + L1PA8 LINE L1 4991 6164 -8 1949 176 8 17 chr17 15210387 15210746 -74293807 + L1MB5 LINE L1 5812 6167 -7 515 290 0 0 chr17 15212732 15212856 -74291697 - MER94 DNA DNA -10 124 1 307 290 84 55 chr17 15213359 15213748 -74290805 - MLT1L LTR MaLR -7 504 108 1071 152 6 22 chr17 15214721 15214899 -74289654 + MER58B DNA MER1_type 167 341 0 754 277 113 68 chr17 15215343 15215801 -74288752 + L3 LINE CR1 477 955 -622 2328 252 57 56 chr17 15215821 15216536 -74288017 + L1ME3A LINE L1 4885 5598 -572 1470 217 85 96 chr17 15216536 15216700 -74287853 + MER34 LTR ERV1 1 165 -377 2446 80 0 0 chr17 15216700 15216999 -74287554 + AluSx SINE Alu 1 299 -13 1470 217 85 96 chr17 15216999 15217378 -74287175 + MER34 LTR ERV1 165 538 -4 2328 252 57 56 chr17 15217378 15217777 -74286776 + L1ME3A LINE L1 5598 5999 -171 2270 116 0 0 chr17 15217777 15218088 -74286465 + AluSp SINE Alu 1 311 -2 2328 252 57 56 chr17 15218088 15218221 -74286332 + L1ME3A LINE L1 5999 6130 -40 2355 86 3 10 chr17 15218583 15218887 -74285666 + AluSc SINE Alu 2 303 -6 572 197 67 91 chr17 15218903 15219111 -74285442 + MER102a DNA MER1_type 108 310 -20 485 268 99 53 chr17 15219495 15219613 -74284940 - L2 LINE L2 -8 3305 3194 204 97 0 0 chr17 15219613 15219644 -74284909 + (CATA)n Simple_repeat Simple_repeat 2 32 0 485 268 99 53 chr17 15219644 15219682 -74284871 - L2 LINE L2 -119 3194 3159 2104 120 3 0 chr17 15219682 15219974 -74284579 + AluSq SINE Alu 1 293 -20 485 268 99 53 chr17 15219974 15220347 -74284206 - L2 LINE L2 -154 3159 2722 1790 137 0 58 chr17 15220495 15220797 -74283756 + AluJo SINE Alu 1 284 -28 198 0 0 0 chr17 15220797 15220819 -74283734 + (ATG)n Simple_repeat Simple_repeat 2 23 0 1790 137 0 58 chr17 15220819 15220844 -74283709 + AluJo SINE Alu 284 309 -3 267 276 0 0 chr17 15221891 15221949 -74282604 - L2 LINE L2 -1 3271 3214 2256 76 14 3 chr17 15222446 15222734 -74281819 + AluSc SINE Alu 1 291 -18 342 285 43 31 chr17 15223057 15223313 -74281240 - L1M4 LINE L1 -1440 4706 4448 6807 61 2 3 chr17 15223318 15224174 -74280379 - L1PA8 LINE L1 0 6172 5318 7584 200 50 14 chr17 15224309 15225393 -74279160 - L1MB8 LINE L1 0 6178 5134 1364 249 51 33 chr17 15225393 15225782 -74278771 - MSTD LTR MaLR 0 396 1 7584 200 50 14 chr17 15225782 15225975 -74278578 - L1MB8 LINE L1 -1044 5134 4949 2266 119 0 0 chr17 15225975 15226270 -74278283 + AluSx SINE Alu 3 297 -15 7584 200 50 14 chr17 15226270 15227653 -74276900 - L1MB8 LINE L1 -1229 4949 3421 444 243 14 142 chr17 15227660 15227895 -74276658 + L2 LINE L2 3051 3242 -71 2099 113 0 14 chr17 15227895 15228187 -74276366 - AluSc SINE Alu -21 288 1 444 243 14 142 chr17 15228187 15228247 -74276306 + L2 LINE L2 3242 3308 -5 231 339 60 42 chr17 15228247 15228801 -74275752 - L1M4 LINE L1 -2243 3903 3340 21 71 0 0 chr17 15229091 15229133 -74275420 + AT_rich Low_complexity Low_complexity 1 42 0 2326 109 0 0 chr17 15230517 15230828 -74273725 + AluY SINE Alu 1 311 0 837 276 172 37 chr17 15231541 15231976 -74272577 + MLT1J LTR MaLR 1 494 -17 973 250 70 13 chr17 15232314 15232626 -74271927 + MARNA DNA Mariner 169 498 -88 184 139 0 28 chr17 15234073 15234109 -74270444 - L2 LINE L2 -15 3298 3264 2184 76 23 36 chr17 15234270 15234597 -74269956 - AluSq SINE Alu 0 313 1 213 94 0 0 chr17 15235319 15235351 -74269202 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 435 272 256 5 chr17 15235502 15235693 -74268860 + MIR SINE MIR 2 240 -22 401 338 0 15 chr17 15235727 15235860 -74268693 + MIR SINE MIR 77 207 -55 362 215 99 16 chr17 15236360 15236481 -74268072 + LTR67 LTR ERVL 426 556 -1 290 26 26 0 chr17 15236555 15236594 -74267959 + (TATG)n Simple_repeat Simple_repeat 1 40 0 2232 91 0 10 chr17 15236653 15236950 -74267603 + AluSq SINE Alu 1 294 -19 950 254 48 121 chr17 15236957 15237579 -74266974 - L2 LINE L2 0 3313 2729 2364 80 0 0 chr17 15237707 15237993 -74266560 - AluSc SINE Alu -23 286 1 242 324 169 7 chr17 15239184 15239320 -74265233 + MIR3 SINE MIR 38 195 -13 228 320 74 42 chr17 15239397 15239567 -74264986 - MIR3 SINE MIR -24 184 8 1806 214 118 16 chr17 15239575 15240310 -74264243 + L1ME1 LINE L1 5312 6163 -3 1948 174 58 0 chr17 15241592 15241937 -74262616 + MLT1A1 LTR MaLR 1 365 0 217 338 44 50 chr17 15242576 15242736 -74261817 - L2 LINE L2 -56 3216 3058 2076 128 0 7 chr17 15243522 15243820 -74260733 - AluSg SINE Alu -14 296 1 378 230 58 43 chr17 15244491 15244630 -74259923 + L1ME LINE L1 5664 5804 -317 709 216 9 0 chr17 15244696 15244812 -74259741 + FLAM_A SINE Alu 1 117 -16 211 91 0 0 chr17 15244812 15244845 -74259708 + (TAAAA)n Simple_repeat Simple_repeat 2 175 0 204 237 17 51 chr17 15244924 15245042 -74259511 + T-rich Low_complexity Low_complexity 2 115 0 207 182 45 30 chr17 15245059 15245125 -74259428 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 * 310 247 129 87 chr17 15245099 15245156 -74259397 - L1MEc LINE L1 -3987 2409 2356 819 142 8 15 chr17 15245156 15245290 -74259263 - FLAM_C SINE Alu 0 133 1 310 247 129 87 chr17 15245290 15245519 -74259034 - L1MEc LINE L1 -4040 2356 2111 26 64 0 0 chr17 15245973 15246020 -74258533 + AT_rich Low_complexity Low_complexity 1 47 0 452 311 81 28 chr17 15246305 15246739 -74257814 - L1ME3A LINE L1 -286 5867 5411 531 208 0 0 chr17 15246761 15246857 -74257696 - FLAM_A SINE Alu -41 101 6 290 239 76 18 chr17 15246863 15247038 -74257515 - L1ME3A LINE L1 -752 5401 5240 * 345 282 42 42 chr17 15247033 15247274 -74257279 - L1ME3A LINE L1 -4916 1203 963 394 281 0 89 chr17 15247283 15247429 -74257124 - L2 LINE L2 0 3313 3181 406 264 72 82 chr17 15247429 15247721 -74256832 - L1ME3A LINE L1 -5159 960 672 199 355 24 89 chr17 15248504 15249088 -74255465 + L2 LINE L2 2191 2736 -578 471 289 112 48 chr17 15249175 15249262 -74255291 + MLT1J2 LTR MaLR 69 149 -301 192 97 0 0 chr17 15249262 15249293 -74255260 + (TG)n Simple_repeat Simple_repeat 2 32 0 471 289 112 48 chr17 15249293 15249562 -74254991 + MLT1J2 LTR MaLR 149 448 -2 264 30 0 0 chr17 15249932 15249965 -74254588 + (TG)n Simple_repeat Simple_repeat 2 34 0 327 277 65 26 chr17 15251011 15251166 -74253387 - MLT1L LTR MaLR -6 609 449 2311 107 0 0 chr17 15251997 15252295 -74252258 + AluSc SINE Alu 1 298 -11 2050 82 0 72 chr17 15252813 15253149 -74251404 - AluY SINE Alu 0 314 1 1167 112 28 0 chr17 15253637 15253816 -74250737 - L1PA13 LINE L1 -7 6156 5973 548 81 69 0 chr17 15253816 15253903 -74250650 + L1P4 LINE L1 5513 5605 -563 614 130 0 0 chr17 15254051 15254151 -74250402 + L1P4 LINE L1 5608 5707 -461 2293 94 7 0 chr17 15254720 15255019 -74249534 + AluSx SINE Alu 2 302 -10 2321 113 3 0 chr17 15255019 15255403 -74249150 + AluSp SINE Alu 1 386 0 2296 148 56 2 chr17 15255417 15255830 -74248723 - LTR47A LTR ERVL -17 435 1 3867 154 64 52 chr17 15255837 15257305 -74247248 - LTR49-int LTR ERV1 -687 6071 4569 9149 159 50 21 chr17 15257320 15258711 -74245842 - LTR49-int LTR ERV1 -1905 4853 3504 3461 147 68 42 chr17 15258711 15259418 -74245135 + LTR8A LTR ERV1 3 727 0 9149 159 50 21 chr17 15259418 15259804 -74244749 - LTR49-int LTR ERV1 -3254 3504 3046 2096 107 3 32 chr17 15259804 15260113 -74244440 - AluSp SINE Alu -13 300 1 9149 159 50 21 chr17 15260113 15260219 -74244334 - LTR49-int LTR ERV1 -3712 3046 2945 941 104 8 0 chr17 15260251 15260385 -74244168 - AluSp/q SINE Alu -4 309 175 1271 159 81 51 chr17 15260385 15260882 -74243671 - LTR49-int LTR ERV1 -2770 3561 1181 463 188 0 0 chr17 15260909 15261006 -74243547 - LTR49-int LTR ERV1 -3220 2726 854 * 940 229 23 36 chr17 15260999 15261307 -74243246 - LTR49-int LTR ERV1 -4060 2271 1984 344 332 35 66 chr17 15261344 15261414 -74243139 - L1 LINE L1 -1635 4511 4440 1995 114 4 4 chr17 15261414 15261734 -74242819 - AluSg SINE Alu 0 320 1 344 332 35 66 chr17 15261734 15261782 -74242771 - L1 LINE L1 -1706 4440 4392 198 0 0 0 chr17 15261782 15261804 -74242749 + (TG)n Simple_repeat Simple_repeat 2 23 0 344 332 35 66 chr17 15261804 15261919 -74242634 - L1 LINE L1 -1754 4392 4284 849 266 145 18 chr17 15261919 15262318 -74242235 - MLT1J2 LTR MaLR 0 450 1 344 332 35 66 chr17 15262318 15262367 -74242186 - L1 LINE L1 -1862 4284 4235 256 327 52 13 chr17 15262508 15262814 -74241739 - L1 LINE L1 -2207 3939 3622 25859 59 3 6 chr17 15262988 15267348 -74237205 - L1PA6 LINE L1 -1 6153 1809 747 119 0 0 chr17 15267359 15267468 -74237085 - L1PA6 LINE L1 -6027 119 11 2465 227 67 47 chr17 15267475 15268170 -74236383 - L1ME1 LINE L1 -63 6103 5358 1962 133 0 20 chr17 15268170 15268331 -74236222 - AluY SINE Alu -15 296 142 279 0 0 0 chr17 15268331 15268362 -74236191 + (TA)n Simple_repeat Simple_repeat 1 31 0 1962 133 0 20 chr17 15268362 15268500 -74236053 - AluY SINE Alu -169 142 3 2465 227 67 47 chr17 15268500 15268903 -74235650 - L1ME1 LINE L1 -808 5358 4965 777 238 34 55 chr17 15268923 15269102 -74235451 - MIR SINE MIR -18 244 70 2507 60 3 0 chr17 15269102 15269404 -74235149 + AluY SINE Alu 1 303 -8 777 238 34 55 chr17 15269404 15269459 -74235094 - MIR SINE MIR -192 70 15 262 259 85 5 chr17 15269507 15269719 -74234834 - L1ME1 LINE L1 -2840 3306 3078 386 305 73 76 chr17 15269950 15270252 -74234301 + L1MC4a LINE L1 6499 6799 -1009 285 349 24 42 chr17 15271702 15271868 -74232685 + L2 LINE L2 2888 3050 -222 1535 148 7 14 chr17 15271948 15272232 -74232321 + Tigger2 DNA MER2_type 1 282 -2436 718 161 8 0 chr17 15272232 15272350 -74232203 + AluSq/x SINE Alu 1 119 -194 2507 162 32 4 chr17 15272378 15272842 -74231711 + Tigger2 DNA MER2_type 268 744 -1974 1079 148 0 0 chr17 15272970 15273146 -74231407 - MER50 LTR ERV1 -23 711 536 1285 101 11 0 chr17 15273164 15273343 -74231210 - AluSg/x SINE Alu 0 312 132 2846 153 24 22 chr17 15273344 15273895 -74230658 - MER50 LTR ERV1 -182 552 1 1485 157 4 15 chr17 15273920 15274181 -74230372 + Tigger2 DNA MER2_type 2451 2708 -10 273 103 0 0 chr17 15274543 15274582 -74229971 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 332 236 17 28 chr17 15274585 15274763 -74229790 + CT-rich Low_complexity Low_complexity 4 179 0 323 192 13 0 chr17 15274812 15274890 -74229663 + CT-rich Low_complexity Low_complexity 2 80 0 784 135 5 43 chr17 15274907 15275092 -74229461 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 245 277 145 32 chr17 15275453 15275702 -74228851 - L1ME LINE L1 -459 5662 5386 795 306 103 42 chr17 15275740 15276458 -74228095 - L1ME LINE L1 -795 5351 4590 30 45 0 0 chr17 15276597 15276641 -74227912 + AT_rich Low_complexity Low_complexity 1 44 0 2345 104 0 0 chr17 15277185 15277494 -74227059 - AluSg1 SINE Alu 0 309 1 28 0 0 0 chr17 15277717 15277745 -74226808 + AT_rich Low_complexity Low_complexity 1 28 0 279 154 0 0 chr17 15278733 15278785 -74225768 - L1MB3 LINE L1 -1 6182 6131 259 141 26 0 chr17 15278785 15278863 -74225690 + (TA)n Simple_repeat Simple_repeat 2 81 0 1811 176 28 42 chr17 15278863 15278880 -74225673 - L1MB3 LINE L1 -17 6166 6150 2089 114 3 7 chr17 15278880 15279178 -74225375 - AluY SINE Alu -14 297 1 1811 176 28 42 chr17 15279178 15279503 -74225050 - L1MB3 LINE L1 -33 6150 5829 2583 71 0 0 chr17 15279503 15279814 -74224739 - AluY SINE Alu 0 311 1 1811 176 28 42 chr17 15279814 15279895 -74224658 - L1MB3 LINE L1 -354 5829 5748 1204 159 0 0 chr17 15279989 15280178 -74224375 - MER5A DNA MER1_type 0 189 1 1147 15 0 0 chr17 15281537 15281668 -74222885 - L1PA5 LINE L1 -9 6145 6015 2847 6 0 0 chr17 15282718 15283029 -74221524 - AluYa5 SINE Alu 0 311 1 252 292 0 15 chr17 15283255 15283320 -74221233 - L2 LINE L2 0 3313 3250 1948 188 27 17 chr17 15283344 15283749 -74220804 - MLT2D LTR ERVL 0 414 6 586 229 21 7 chr17 15283754 15283894 -74220659 - MER5B DNA MER1_type -35 143 2 456 316 72 8 chr17 15283894 15284142 -74220411 - L2 LINE L2 -51 3262 2999 351 0 0 0 chr17 15284287 15284326 -74220227 + (CA)n Simple_repeat Simple_repeat 2 40 0 395 136 21 78 chr17 15284768 15284959 -74219594 + (TA)n Simple_repeat Simple_repeat 1 180 0 1096 168 43 13 chr17 15284990 15285222 -74219331 - L1MC3 LINE L1 -23 7762 7524 2295 106 23 0 chr17 15285832 15286135 -74218418 - AluSg SINE Alu 0 310 1 306 321 36 0 chr17 15286153 15286265 -74218288 - L2 LINE L2 -3 3269 3154 296 312 29 59 chr17 15286717 15286887 -74217666 + MIR SINE MIR 86 250 -12 464 60 30 0 chr17 15287693 15287760 -74216793 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 266 299 0 26 chr17 15288586 15288663 -74215890 + L2 LINE L2 3232 3306 -7 230 203 149 40 chr17 15288731 15288805 -74215748 - L3b LINE CR1 -4 1579 1498 1987 123 10 17 chr17 15289148 15289473 -74215080 + AluSq SINE Alu 1 313 0 26 64 0 0 chr17 15289894 15289941 -74214612 + AT_rich Low_complexity Low_complexity 1 47 0 2170 141 43 13 chr17 15290100 15290117 -74214436 - MER57A LTR ERV1 0 403 388 2230 112 13 0 chr17 15290117 15290422 -74214131 + AluSc SINE Alu 1 309 0 2170 141 43 13 chr17 15290422 15290795 -74213758 - MER57A LTR ERV1 -15 388 1 352 256 31 78 chr17 15291427 15291485 -74213068 - L1ME LINE L1 -454 5667 5608 2301 85 0 0 chr17 15291485 15291794 -74212759 - AluY SINE Alu 0 309 1 352 256 31 78 chr17 15291794 15291863 -74212690 - L1ME LINE L1 -513 5608 5545 182 226 32 108 chr17 15292922 15293015 -74211538 + L3 LINE CR1 627 712 -865 2309 82 0 57 chr17 15293344 15293377 -74211176 - AluSx SINE Alu 0 312 279 414 0 0 0 chr17 15293377 15293423 -74211130 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2309 82 0 57 chr17 15293423 15293720 -74210833 - AluSx SINE Alu -33 279 1 250 338 83 30 chr17 15294192 15294458 -74210095 + MLT1L LTR MaLR 1 280 -335 2413 101 0 0 chr17 15294480 15294786 -74209767 - AluSx SINE Alu -6 306 1 2167 84 0 25 chr17 15296063 15296405 -74208148 + AluSg SINE Alu 2 336 0 235 263 97 42 chr17 15297166 15297383 -74207170 - L1ME4a LINE L1 -16 6105 5877 317 223 150 86 chr17 15297457 15297677 -74206876 - L1ME4a LINE L1 -382 5739 5506 27 49 0 0 chr17 15297686 15297727 -74206826 + AT_rich Low_complexity Low_complexity 1 41 0 2164 83 31 3 chr17 15297764 15298054 -74206499 - AluY SINE Alu -13 298 1 21 36 0 0 chr17 15298131 15298159 -74206394 + AT_rich Low_complexity Low_complexity 1 28 0 1960 132 3 0 chr17 15298464 15298753 -74205800 - AluSx SINE Alu 0 312 23 885 236 16 68 chr17 15299128 15299438 -74205115 + L2 LINE L2 3020 3313 0 1915 149 0 32 chr17 15299726 15300034 -74204519 - AluJb SINE Alu -13 299 2 371 320 80 20 chr17 15300969 15301169 -74203384 + L3 LINE CR1 1347 1558 -19 2195 123 3 0 chr17 15301443 15301751 -74202802 + AluSx SINE Alu 1 309 -3 1800 217 50 28 chr17 15301783 15302220 -74202333 - MLT1C LTR MaLR 0 467 41 2560 151 51 12 chr17 15302220 15302630 -74201923 - MSTB LTR MaLR 0 426 1 9933 156 6 41 chr17 15302630 15303996 -74200557 - MSTB-int LTR MaLR 0 1651 356 2276 114 0 0 chr17 15303996 15304303 -74200250 - AluY SINE Alu -4 307 1 9933 156 6 41 chr17 15304303 15304647 -74199906 - MSTB-int LTR MaLR -1295 356 1 2345 188 28 26 chr17 15304647 15305072 -74199481 - MSTB LTR MaLR 0 426 1 1800 217 50 28 chr17 15305072 15305089 -74199464 - MLT1C LTR MaLR -425 42 1 251 300 11 11 chr17 15305654 15305744 -74198809 + MLT1F1 LTR MaLR 136 225 -324 388 250 62 0 chr17 15305831 15305958 -74198595 + MLT1F1 LTR MaLR 327 409 0 730 250 7 7 chr17 15306104 15306256 -74198297 + MER5A DNA MER1_type 38 189 0 301 176 0 0 chr17 15306350 15306401 -74198152 - MER5B DNA MER1_type -126 52 2 2329 62 3 10 chr17 15306646 15306936 -74197617 + AluY SINE Alu 1 288 -23 871 149 8 15 chr17 15307364 15307524 -74197029 - FLAM_C SINE Alu 0 159 1 212 332 121 30 chr17 15307528 15307760 -74196793 + L2 LINE L2 2149 2401 -913 583 264 57 44 chr17 15309244 15309559 -74194994 - L1ME4a LINE L1 0 6121 5803 2486 75 3 0 chr17 15309800 15310105 -74194448 - AluY SINE Alu -5 306 1 370 251 120 23 chr17 15310498 15310673 -74193880 + L1MB8 LINE L1 5986 6177 -1 295 310 54 22 chr17 15310996 15311137 -74193416 + MIR3 SINE MIR 63 208 0 2265 103 13 0 chr17 15311430 15311731 -74192822 - AluSp SINE Alu -8 305 1 2114 122 3 25 chr17 15312113 15312432 -74192121 + AluSx SINE Alu 1 312 0 243 0 0 0 chr17 15313460 15313487 -74191066 + (CA)n Simple_repeat Simple_repeat 2 28 0 317 208 14 28 chr17 15313945 15314017 -74190536 - L2 LINE L2 -1 3271 3201 5316 147 147 44 chr17 15314355 15314556 -74189997 + Tigger3b DNA MER2_type 1 180 -2848 2176 91 3 46 chr17 15314556 15314863 -74189690 + AluSp SINE Alu 2 295 -18 5316 147 147 44 chr17 15314863 15314891 -74189662 + Tigger3b DNA MER2_type 180 204 -2824 279 0 0 0 chr17 15314891 15314922 -74189631 + (CA)n Simple_repeat Simple_repeat 2 32 0 5316 147 147 44 chr17 15314922 15315431 -74189122 + Tigger3b DNA MER2_type 204 659 -2369 2238 84 10 13 chr17 15315431 15315730 -74188823 + AluSc SINE Alu 1 298 -11 5316 147 147 44 chr17 15315730 15316105 -74188448 + Tigger3b DNA MER2_type 659 1231 0 2271 148 81 26 chr17 15316903 15317064 -74187489 - MER39 LTR ERV1 -2 705 554 2371 92 0 0 chr17 15317064 15317359 -74187194 - AluSg SINE Alu -15 295 1 2271 148 81 26 chr17 15317359 15317841 -74186712 - MER39 LTR ERV1 -153 554 4 777 254 150 52 chr17 15318526 15318872 -74185681 - L2 LINE L2 -1 3312 2933 433 324 37 0 chr17 15318905 15319041 -74185512 - L2 LINE L2 -529 2785 2645 187 134 59 34 chr17 15319391 15319510 -74185043 + (TA)n Simple_repeat Simple_repeat 2 123 0 192 40 0 0 chr17 15319510 15319535 -74185018 + (GA)n Simple_repeat Simple_repeat 2 26 0 1231 217 29 53 chr17 15320904 15321407 -74183146 + L1M4 LINE L1 2289 2856 -3290 587 113 12 0 chr17 15321407 15321487 -74183066 + AluS SINE Alu 220 300 -12 269 278 59 25 chr17 15321488 15321680 -74182873 - L1MC/D LINE L1 -286 5884 5724 2118 131 0 0 chr17 15323114 15323419 -74181134 + AluSq SINE Alu 1 305 -8 461 289 19 19 chr17 15323675 15323831 -74180722 - MIR SINE MIR 0 262 107 225 217 17 0 chr17 15324339 15324399 -74180154 + (TA)n Simple_repeat Simple_repeat 1 61 0 267 235 78 39 chr17 15324509 15324611 -74179942 - MLT1I LTR MaLR -20 389 284 2490 35 0 0 chr17 15324631 15324951 -74179602 + AluY SINE Alu 1 320 0 207 0 0 0 chr17 15325461 15325484 -74179069 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3547 164 55 36 chr17 15327151 15327889 -74176664 + LTR1B LTR ERV1 1 771 -14 1972 125 69 19 chr17 15327898 15328259 -74176294 + L1MB3 LINE L1 5805 6183 0 1989 168 116 13 chr17 15329205 15329586 -74174967 + MER83 LTR ERV1 23 442 -6 188 317 0 0 chr17 15330190 15330250 -74174303 + L2 LINE L2 2590 2649 -665 30 27 0 0 chr17 15330318 15330355 -74174198 + AT_rich Low_complexity Low_complexity 1 37 0 31761 113 13 58 chr17 15330359 15336821 -74167732 + L1PA8 LINE L1 12 6172 0 2157 108 162 7 chr17 15336985 15337419 -74167134 + MER4B LTR ERV1 5 788 -84 301 54 0 0 chr17 15337419 15337456 -74167097 + MER4A LTR ERV1 628 664 0 261 0 0 0 chr17 15337491 15337520 -74167033 + (TG)n Simple_repeat Simple_repeat 2 30 0 3090 113 21 0 chr17 15337685 15338110 -74166443 + MER57B LTR ERV1 1 434 0 456 299 176 49 chr17 15338131 15338539 -74166014 + L2 LINE L2 2812 3271 -1 1054 294 83 41 chr17 15338565 15338790 -74165763 + L2 LINE L2 2429 2643 -670 309 26 0 0 chr17 15338790 15338828 -74165725 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2113 95 0 11 chr17 15338832 15339117 -74165436 - AluSx SINE Alu -30 282 1 1054 294 83 41 chr17 15339117 15339737 -74164816 + L2 LINE L2 2645 3313 0 239 330 79 49 chr17 15339746 15339949 -74164604 + MIR SINE MIR 1 209 -53 216 200 0 0 chr17 15340163 15340203 -74164350 + GA-rich Low_complexity Low_complexity 3 42 0 299 295 87 51 chr17 15341214 15341372 -74163181 - L1ME4a LINE L1 -123 5998 5847 2350 90 0 3 chr17 15341372 15341672 -74162881 + AluSq SINE Alu 5 303 -10 299 295 87 51 chr17 15341672 15341906 -74162647 - L1ME4a LINE L1 -274 5847 5592 344 308 150 23 chr17 15341984 15342250 -74162303 - L1ME4a LINE L1 -1082 5064 4765 360 278 35 42 chr17 15342273 15342417 -74162136 - L2 LINE L2 -5 3267 3125 472 309 198 45 chr17 15342495 15343273 -74161280 - L2 LINE L2 -561 2753 2095 2449 95 0 0 chr17 15343273 15343579 -74160974 + AluSx SINE Alu 1 306 -6 472 309 198 45 chr17 15343579 15343754 -74160799 - L2 LINE L2 -1219 2095 1948 192 77 0 0 chr17 15343754 15343780 -74160773 + (TTG)n Simple_repeat Simple_repeat 2 27 0 472 309 198 45 chr17 15343780 15344092 -74160461 - L2 LINE L2 -1366 1948 1293 305 318 16 51 chr17 15344153 15344368 -74160185 - L1 LINE L1 -1419 4727 4519 2611 117 14 3 chr17 15344374 15344734 -74159819 - THE1B LTR MaLR 0 364 1 755 212 0 27 chr17 15345471 15345617 -74158936 - FLAM_A SINE Alu 0 142 1 2140 92 0 76 chr17 15345939 15346267 -74158286 - AluSq SINE Alu -10 303 1 22 0 0 0 chr17 15346276 15346298 -74158255 + AT_rich Low_complexity Low_complexity 1 22 0 1231 41 0 0 chr17 15346557 15346703 -74157850 - AluY SINE Alu -10 301 156 1852 173 0 7 chr17 15347233 15347533 -74157020 - AluJb SINE Alu -14 298 1 226 284 30 0 chr17 15347997 15348064 -74156489 + MLT1L LTR MaLR 219 287 -328 2541 178 30 65 chr17 15348130 15348671 -74155882 - L1MC2 LINE L1 -11 6333 5819 2192 91 0 0 chr17 15348671 15348947 -74155606 - AluSp SINE Alu -1 312 37 2541 178 30 65 chr17 15348947 15349078 -74155475 - L1MC2 LINE L1 -525 5819 5685 483 285 106 12 chr17 15349080 15349336 -74155217 + MLT1L LTR MaLR 329 608 -7 537 349 35 23 chr17 15350047 15350305 -74154248 - L3 LINE CR1 -236 1341 1081 829 265 27 31 chr17 15350316 15350610 -74153943 - LTR16C LTR ERVL 0 491 199 218 145 16 48 chr17 15350804 15350866 -74153687 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 1629 173 83 67 chr17 15352599 15353045 -74151508 + MLT1C LTR MaLR 1 453 -14 459 230 71 8 chr17 15353907 15354033 -74150520 + MIR SINE MIR 86 219 -43 236 348 0 22 chr17 15354161 15354266 -74150287 - MIR SINE MIR -63 145 49 1868 162 7 10 chr17 15354325 15354634 -74149919 + AluJb SINE Alu 5 312 0 649 162 40 29 chr17 15356140 15356313 -74148240 - L1MB3 LINE L1 -2 6181 6007 1292 161 56 14 chr17 15356343 15356439 -74148114 - L1MB2 LINE L1 -149 6022 5931 505 123 0 12 chr17 15356439 15356520 -74148033 - MADE1 DNA Mariner 0 80 1 1292 161 56 14 chr17 15356520 15356709 -74147844 - L1MB2 LINE L1 -240 5931 5725 574 329 25 16 chr17 15357327 15357579 -74146974 - MIR SINE MIR -6 256 3 377 202 17 17 chr17 15358946 15359065 -74145488 + CT-rich Low_complexity Low_complexity 1 119 0 526 131 84 82 chr17 15359420 15359613 -74144940 + MER21B LTR ERV1 680 861 -2 1969 239 18 22 chr17 15360367 15360874 -74143679 - LTR31 LTR ERV1 0 619 115 2122 129 0 3 chr17 15361275 15361585 -74142968 - AluSc SINE Alu 0 309 1 415 200 29 7 chr17 15361852 15361992 -74142561 + (TG)n Simple_repeat Simple_repeat 2 144 0 430 339 107 43 chr17 15362149 15362709 -74141844 + L3 LINE CR1 981 1576 -1 185 343 86 29 chr17 15363927 15364032 -74140521 + L2 LINE L2 3154 3264 -8 217 292 0 0 chr17 15364742 15364790 -74139763 + L2 LINE L2 3185 3232 -40 405 0 0 0 chr17 15365298 15365343 -74139210 + (CA)n Simple_repeat Simple_repeat 2 46 0 512 339 131 30 chr17 15365530 15365862 -74138691 + L2 LINE L2 2059 2356 -958 1811 132 0 33 chr17 15365862 15366134 -74138419 - AluSx SINE Alu -16 296 34 512 339 131 30 chr17 15366134 15366600 -74137953 + L2 LINE L2 2356 2938 -376 257 270 0 14 chr17 15366742 15366816 -74137737 + MER63 DNA MER1_type 983 1055 -5 592 296 62 33 chr17 15366900 15367174 -74137379 + L2 LINE L2 3029 3310 -3 1118 89 0 6 chr17 15367421 15367579 -74136974 + L1MA1 LINE L1 6146 6302 0 322 262 60 0 chr17 15369099 15369183 -74135370 + MIR SINE MIR 60 148 -60 305 231 231 0 chr17 15369290 15369411 -74135142 + Charlie8 DNA MER1_type 61 209 -2208 398 145 14 0 chr17 15369640 15369709 -74134844 - MIR SINE MIR -10 252 183 189 250 59 59 chr17 15369812 15369880 -74134673 + MIR SINE MIR 33 100 -162 295 23 45 0 chr17 15369921 15369965 -74134588 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1315 212 60 106 chr17 15369975 15370493 -74134060 - L1ME2 LINE L1 -10 6154 5661 323 303 28 28 chr17 15370494 15370639 -74133914 + MIR SINE MIR 118 262 0 358 283 39 11 chr17 15371883 15372063 -74132490 - L1ME4a LINE L1 -227 5894 5710 1756 201 44 16 chr17 15372396 15372851 -74131702 + L1MB7 LINE L1 5693 6159 -25 234 160 0 0 chr17 15373801 15373851 -74130702 + (CAT)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr17 15374461 15374481 -74130072 + (GGA)n Simple_repeat Simple_repeat 1 20 0 1080 158 16 0 chr17 15374665 15374849 -74129704 + MSTA LTR MaLR 242 428 0 5591 150 9 5 chr17 15374955 15376618 -74127935 + L1PB1 LINE L1 4126 5792 -359 246 173 0 53 chr17 15376618 15376693 -74127860 + (TA)n Simple_repeat Simple_repeat 1 71 0 2542 104 3 3 chr17 15376702 15377057 -74127496 + L1PB1 LINE L1 5791 6145 -6 24 67 0 0 chr17 15378143 15378188 -74126365 + AT_rich Low_complexity Low_complexity 1 45 0 326 70 0 53 chr17 15378264 15378321 -74126232 + L1PB1 LINE L1 6098 6151 0 22 56 0 0 chr17 15378493 15378529 -74126024 + AT_rich Low_complexity Low_complexity 1 36 0 503 306 0 0 chr17 15378576 15378700 -74125853 + MER5B DNA MER1_type 1 124 -54 2500 47 0 7 chr17 15378700 15378997 -74125556 - AluY SINE Alu -16 295 1 804 45 0 36 chr17 15379023 15379134 -74125419 + AluY SINE Alu 204 310 -1 222 196 0 43 chr17 15379136 15379182 -74125371 - MER5B DNA MER1_type -134 44 1 710 279 45 38 chr17 15379400 15379819 -74124734 - L1MDa LINE L1 -3558 2982 2561 390 235 43 71 chr17 15379825 15380080 -74124473 - L1MDa LINE L1 -4026 2514 2267 2457 79 0 0 chr17 15380099 15380402 -74124151 - AluY SINE Alu -8 303 1 183 254 0 0 chr17 15380557 15380620 -74123933 + T-rich Low_complexity Low_complexity 2 64 0 785 207 101 24 chr17 15380656 15380864 -74123689 + MIR SINE MIR 8 231 -31 327 296 105 17 chr17 15381331 15381503 -74123050 - HAL1 LINE L1 -847 1660 1474 204 179 0 0 chr17 15381839 15381878 -74122675 + (ATG)n Simple_repeat Simple_repeat 1 39 0 242 233 82 0 chr17 15382088 15382161 -74122392 + MIR3 SINE MIR 87 165 -43 822 227 55 81 chr17 15382308 15382705 -74121848 - L1ME1 LINE L1 -9 6157 5768 206 293 69 0 chr17 15382762 15382820 -74121733 + L2 LINE L2 3211 3272 0 306 356 34 7 chr17 15383146 15383295 -74121258 + MIR3 SINE MIR 45 197 -11 260 299 140 19 chr17 15384452 15384559 -74119994 + MIR3 SINE MIR 67 186 -22 447 19 0 0 chr17 15384682 15384734 -74119819 + (TG)n Simple_repeat Simple_repeat 2 53 0 317 276 105 86 chr17 15385027 15385352 -74119201 + HAL1b LINE L1 1 257 -1091 245 175 16 79 chr17 15385399 15385473 -74119080 + HAL1 LINE L1 1425 1489 -1018 2034 152 3 0 chr17 15385473 15385769 -74118784 + AluSq SINE Alu 1 297 -16 245 175 16 79 chr17 15385769 15385820 -74118733 + HAL1 LINE L1 1489 1542 -965 2194 152 106 2 chr17 15385875 15386357 -74118196 - L1MA9 LINE L1 0 6312 5781 456 51 0 0 chr17 15386368 15386427 -74118126 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1752 233 31 12 chr17 15386460 15387048 -74117505 - L1 LINE L1 -2802 3232 2634 1296 99 6 0 chr17 15387057 15387228 -74117325 + AluSp SINE Alu 130 301 -12 2420 264 56 31 chr17 15387228 15388246 -74116307 - L1 LINE L1 -3397 2637 1646 2206 88 10 14 chr17 15388246 15388543 -74116010 + AluSg SINE Alu 1 296 -14 2420 264 56 31 chr17 15388543 15390818 -74113735 - L1 LINE L1 -4388 1646 13 283 268 10 21 chr17 15390827 15390924 -74113629 + HAL1 LINE L1 1578 1673 -834 2292 106 0 3 chr17 15390955 15391257 -74113296 - AluSq SINE Alu -12 301 1 336 245 69 31 chr17 15391562 15391721 -74112832 + L1MDa LINE L1 2471 2635 -3905 337 325 56 25 chr17 15391782 15391979 -74112574 + L1MDa LINE L1 3996 4198 -2342 24 53 0 0 chr17 15392064 15392102 -74112451 + AT_rich Low_complexity Low_complexity 1 38 0 553 272 120 51 chr17 15392110 15392426 -74112127 + L1MDa LINE L1 4271 4608 -1932 566 294 104 40 chr17 15392550 15393037 -74111516 + L1MDa LINE L1 5160 5615 -949 839 133 0 44 chr17 15393037 15393172 -74111381 + FLAM_C SINE Alu 1 129 -4 566 294 104 40 chr17 15393172 15393790 -74110763 + L1MDa LINE L1 5615 6324 -240 240 250 0 0 chr17 15394027 15394079 -74110474 + GA-rich Low_complexity Low_complexity 3 54 0 487 220 10 0 chr17 15394229 15394329 -74110224 + MER5A DNA MER1_type 9 109 -80 251 152 87 0 chr17 15395103 15395149 -74109404 - L2 LINE L2 0 3313 3264 320 307 63 0 chr17 15395153 15395280 -74109273 + MIR SINE MIR 72 206 -56 2736 89 23 105 chr17 15395694 15396178 -74108375 - MLT2A1 LTR ERVL 0 444 1 2182 110 0 0 chr17 15396227 15396533 -74108020 - AluSx SINE Alu 0 306 1 208 195 0 46 chr17 15396564 15396651 -74107902 + GA-rich Low_complexity Low_complexity 2 84 0 342 0 0 0 chr17 15396889 15396927 -74107626 + (CA)n Simple_repeat Simple_repeat 2 39 0 232 154 31 46 chr17 15396973 15397038 -74107515 + CT-rich Low_complexity Low_complexity 4 67 0 418 301 59 7 chr17 15398134 15398287 -74106266 + MIR SINE MIR 24 184 -78 269 290 60 30 chr17 15398612 15398712 -74105841 + MIR SINE MIR 17 119 -89 341 295 16 52 chr17 15399755 15399958 -74104595 + MIR SINE MIR 38 231 -31 455 294 153 24 chr17 15401482 15401822 -74102731 + L2 LINE L2 1729 2112 -1202 241 275 162 18 chr17 15401848 15402014 -74102539 - MIR SINE MIR -40 222 25 459 270 20 83 chr17 15402480 15402641 -74101912 - MIR SINE MIR -21 241 94 1980 112 24 17 chr17 15402641 15402958 -74101595 - AluSx SINE Alu 0 312 1 459 270 20 83 chr17 15402958 15403000 -74101553 - MIR SINE MIR -168 94 51 2061 136 3 0 chr17 15403446 15403741 -74100812 - AluSx SINE Alu -16 296 1 311 385 63 25 chr17 15404955 15405194 -74099359 - L2 LINE L2 -21 3251 3004 298 339 43 9 chr17 15406137 15406252 -74098301 - MIR3 SINE MIR -14 194 76 2326 91 3 0 chr17 15406518 15406814 -74097739 - AluSc SINE Alu -12 297 1 215 211 28 42 chr17 15406941 15407012 -74097541 - L2 LINE L2 0 3272 3203 269 273 264 8 chr17 15407056 15407177 -74097376 - LTR67 LTR ERVL -396 161 10 1140 310 71 51 chr17 15408390 15409860 -74094693 + L1MEd LINE L1 5 1540 -4770 6052 102 22 1 chr17 15409875 15411364 -74093189 - L1PA8 LINE L1 -1 6171 4660 2609 102 31 26 chr17 15411364 15411786 -74092767 + L1PA8 LINE L1 4208 4631 -1515 329 298 16 0 chr17 15411787 15411908 -74092645 + L1MEd LINE L1 1532 1654 -4656 228 250 0 0 chr17 15412283 15412335 -74092218 + A-rich Low_complexity Low_complexity 4 55 0 237 367 76 26 chr17 15412345 15412609 -74091944 - LTR16C LTR ERVL -11 480 204 338 346 147 0 chr17 15413169 15413325 -74091228 - MIR3 SINE MIR -15 193 15 864 231 84 5 chr17 15413338 15413541 -74091012 - MER58A DNA MER1_type -5 219 1 183 80 0 0 chr17 15414390 15414415 -74090138 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 250 86 0 0 chr17 15415118 15415153 -74089400 + MLT1F1 LTR MaLR 68 102 -465 2569 188 13 44 chr17 15415153 15415770 -74088783 + L1MD3 LINE L1 7390 7987 -8 2285 86 3 3 chr17 15415774 15416066 -74088487 + AluSc SINE Alu 1 292 -17 1284 290 114 52 chr17 15416824 15416926 -74087627 + L2 LINE L2 2467 2561 -752 4356 97 12 54 chr17 15416926 15417614 -74086939 - L1PA13 LINE L1 -4 6159 5501 1284 290 114 52 chr17 15417614 15418309 -74086244 + L2 LINE L2 2561 3312 -1 330 355 19 0 chr17 15419088 15419195 -74085358 + MIR SINE MIR 6 114 -148 494 332 64 57 chr17 15420627 15421034 -74083519 - MLT1J LTR MaLR 0 511 102 180 255 39 20 chr17 15421089 15421140 -74083413 - L3 LINE CR1 -1078 499 448 12246 213 61 35 chr17 15421483 15423005 -74081548 - L1M2 LINE L1 -743 5227 3747 459 0 0 0 chr17 15423005 15423056 -74081497 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 12246 213 61 35 chr17 15423056 15426622 -74077931 - L1M2 LINE L1 -2223 3747 316 242 29 29 0 chr17 15427270 15427305 -74077248 + (TG)n Simple_repeat Simple_repeat 1 36 0 252 130 0 0 chr17 15427305 15427351 -74077202 + (GA)n Simple_repeat Simple_repeat 2 47 0 2295 87 3 13 chr17 15427578 15427878 -74076675 + AluY SINE Alu 1 297 -14 303 289 168 13 chr17 15428373 15428522 -74076031 + HAL1 LINE L1 2250 2421 -86 407 298 60 42 chr17 15428738 15428906 -74075647 + MIR SINE MIR 86 256 -6 391 130 29 0 chr17 15430693 15430762 -74073791 + L1PA10 LINE L1 6096 6166 -2 947 260 64 57 chr17 15430811 15431215 -74073338 - MLT1I LTR MaLR -2 407 1 1581 230 38 53 chr17 15434739 15435208 -74069345 - MLT1C LTR MaLR 0 467 6 2313 115 0 0 chr17 15435373 15435685 -74068868 - AluSx SINE Alu 0 312 1 640 199 0 38 chr17 15436258 15436389 -74068164 - FLAM_A SINE Alu -7 126 1 2920 97 0 42 chr17 15436417 15436581 -74067972 - MER57B LTR ERV1 0 434 265 2055 110 3 7 chr17 15436581 15436871 -74067682 + AluSx SINE Alu 3 291 -21 2920 97 0 42 chr17 15436871 15437158 -74067395 - MER57B LTR ERV1 -169 265 2 288 236 48 91 chr17 15438702 15438867 -74065686 - L1MC5 LINE L1 -562 7399 7242 227 274 63 53 chr17 15439052 15439242 -74065311 - L1MC5 LINE L1 -770 7191 7000 2003 122 0 0 chr17 15439556 15439827 -74064726 + AluSx SINE Alu 35 305 -7 946 222 87 64 chr17 15439924 15440456 -74064097 - L1MC5 LINE L1 -89 7872 7329 251 109 0 0 chr17 15440493 15440539 -74064014 + LTR66 LTR ERVL 394 439 -171 1286 214 19 89 chr17 15440551 15441036 -74063517 - L1MC5 LINE L1 -661 7300 6850 2248 144 75 8 chr17 15441052 15441454 -74063099 - LTR47A LTR ERVL -23 429 1 755 217 58 5 chr17 15441476 15441665 -74062888 - L1MC5 LINE L1 -1129 6832 6634 21 0 0 0 chr17 15441802 15441823 -74062730 + AT_rich Low_complexity Low_complexity 1 21 0 228 313 0 52 chr17 15441835 15441950 -74062603 - L1M4 LINE L1 -2014 4132 4024 30 0 0 0 chr17 15441998 15442028 -74062525 + AT_rich Low_complexity Low_complexity 1 30 0 36 0 0 0 chr17 15442054 15442090 -74062463 + AT_rich Low_complexity Low_complexity 1 36 0 1690 130 35 7 chr17 15442341 15442626 -74061927 - L1PA16 LINE L1 -9 6157 5865 2274 116 3 3 chr17 15443111 15443422 -74061131 - AluSq SINE Alu -2 311 1 21 36 0 0 chr17 15443739 15443767 -74060786 + AT_rich Low_complexity Low_complexity 1 28 0 197 256 0 13 chr17 15443900 15443978 -74060575 + T-rich Low_complexity Low_complexity 4 80 0 258 316 18 0 chr17 15444372 15444486 -74060067 - MER103 DNA DNA -49 117 2 684 0 0 0 chr17 15445142 15445218 -74059335 + (CAATA)n Simple_repeat Simple_repeat 4 79 0 195 344 244 0 chr17 15445251 15445341 -74059212 + MIR SINE MIR 36 147 -61 479 241 46 73 chr17 15445483 15445744 -74058809 - MER112 DNA MER1_type -5 255 2 533 284 87 41 chr17 15445753 15446475 -74058078 - L1ME LINE L1 -515 5649 4890 1465 264 109 28 chr17 15446832 15447556 -74056997 - MER20B DNA MER1_type -1 783 1 1295 182 113 46 chr17 15449202 15449527 -74055026 - MLT1A1 LTR MaLR -1 389 1 1836 153 80 58 chr17 15451326 15451691 -74052862 - MLT1A2 LTR MaLR -1 373 1 567 275 87 45 chr17 15452141 15452428 -74052125 + HAL1 LINE L1 2206 2504 -3 1495 218 97 47 chr17 15453075 15453520 -74051033 - MLT1C LTR MaLR 0 467 1 21 0 0 0 chr17 15453785 15453806 -74050747 + AT_rich Low_complexity Low_complexity 1 21 0 3110 55 3 13 chr17 15453832 15454216 -74050337 + L1PA5 LINE L1 5769 6148 -6 7557 167 29 17 chr17 15454222 15455721 -74048832 + L1PA14 LINE L1 3890 5422 -739 1976 158 0 10 chr17 15455721 15456024 -74048529 + AluSx SINE Alu 1 300 -12 7557 167 29 17 chr17 15456024 15456773 -74047780 + L1PA14 LINE L1 5422 6160 -1 225 0 0 0 chr17 15457498 15457523 -74047030 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 688 296 109 17 chr17 15458660 15459072 -74045481 + L1ME4a LINE L1 5603 6052 -69 328 337 112 0 chr17 15459350 15459519 -74045034 + MIR SINE MIR 67 254 -8 274 259 83 19 chr17 15460808 15460916 -74043637 - MIR3 SINE MIR -6 202 88 239 246 33 0 chr17 15461044 15461105 -74043448 - L2 LINE L2 -5 3308 3246 338 326 38 27 chr17 15461122 15461306 -74043247 + MIR SINE MIR 6 191 -71 181 362 0 0 chr17 15461387 15461434 -74043119 - L2 LINE L2 -86 3186 3140 2525 64 0 16 chr17 15462004 15462315 -74042238 - AluY SINE Alu -5 306 1 25 51 0 0 chr17 15462826 15462865 -74041688 + AT_rich Low_complexity Low_complexity 1 39 0 222 118 59 0 chr17 15462935 15462986 -74041567 + (TA)n Simple_repeat Simple_repeat 2 55 0 1515 208 88 67 chr17 15463049 15463241 -74041312 + L1MC4 LINE L1 6646 6833 -1209 2183 82 32 3 chr17 15463241 15463523 -74041030 - AluY SINE Alu -21 290 1 1515 208 88 67 chr17 15463523 15463864 -74040689 + L1MC4 LINE L1 6833 7190 -852 959 296 79 7 chr17 15463885 15464290 -74040263 - L1MC4a LINE L1 -178 7630 7197 301 365 68 10 chr17 15465013 15465205 -74039348 - MIR SINE MIR -9 253 51 312 363 20 27 chr17 15465586 15465732 -74038821 - MIR3 SINE MIR -28 180 36 23 54 0 0 chr17 15465885 15465922 -74038631 + AT_rich Low_complexity Low_complexity 1 37 0 403 235 135 0 chr17 15465967 15466102 -74038451 - L1MB7 LINE L1 -10 6174 6015 598 278 47 71 chr17 15466107 15466362 -74038191 - MIR SINE MIR -1 261 13 249 237 17 0 chr17 15467786 15467845 -74036708 - MIR SINE MIR -6 256 197 784 182 8 0 chr17 15467891 15468012 -74036541 + FLAM_C SINE Alu 1 122 -11 27 29 0 0 chr17 15468013 15468047 -74036506 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr17 15468245 15468268 -74036285 + AT_rich Low_complexity Low_complexity 1 23 0 705 278 65 42 chr17 15468337 15468741 -74035812 + L1ME LINE L1 5276 5685 -436 2659 45 0 0 chr17 15468987 15469295 -74035258 - AluY SINE Alu -3 308 1 1573 203 28 19 chr17 15471467 15471788 -74032765 + Tigger7 DNA MER2_type 2 325 -408 329 193 145 0 chr17 15471778 15471861 -74032692 + Tigger7 DNA MER2_type 2393 2487 0 * 1890 186 19 38 chr17 15471943 15472313 -74032240 + MLT1A1 LTR MaLR 1 363 -2 1882 159 67 14 chr17 15473845 15474190 -74030363 - MLT1A1 LTR MaLR -2 363 1 28 91 0 0 chr17 15474755 15474832 -74029721 + AT_rich Low_complexity Low_complexity 1 77 0 234 289 173 56 chr17 15474938 15475119 -74029434 - L1MB7 LINE L1 -198 5923 5765 2043 113 0 3 chr17 15475119 15475437 -74029116 - AluSg SINE Alu 0 317 1 234 289 173 56 chr17 15475437 15475596 -74028957 - L1MB7 LINE L1 -356 5765 5542 578 230 103 0 chr17 15476136 15476262 -74028291 + Tigger3(Golem) DNA MER2_type 4 142 -2887 1572 151 8 12 chr17 15476274 15476533 -74028020 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 218 307 102 57 chr17 15476693 15476781 -74027772 + L2 LINE L2 3174 3265 -7 555 170 0 20 chr17 15476856 15476956 -74027597 - Tigger7 DNA MER2_type 0 2487 2390 1207 191 0 109 chr17 15476962 15477123 -74027430 - Tigger7 DNA MER2_type -2226 261 145 2291 113 3 0 chr17 15477123 15477434 -74027119 + AluSx SINE Alu 1 312 0 1207 191 0 109 chr17 15477434 15477565 -74026988 - Tigger7 DNA MER2_type -2342 145 1 1145 209 33 2 chr17 15477681 15478033 -74026520 + Charlie1 DNA MER1_type 1 2761 0 298 300 11 22 chr17 15478111 15478201 -74026352 - L2 LINE L2 0 3272 3184 189 326 97 28 chr17 15478275 15478419 -74026134 - L2 LINE L2 -333 2980 2827 1469 179 71 0 chr17 15478515 15478811 -74025742 - L1MB3 LINE L1 -2 6181 5865 29 28 0 0 chr17 15479108 15479144 -74025409 + AT_rich Low_complexity Low_complexity 1 36 0 851 234 27 5 chr17 15479498 15479682 -74024871 - MER5A DNA MER1_type 0 189 2 296 216 64 105 chr17 15480715 15480842 -74023711 - MER67D LTR ERV1 -2 541 421 2206 110 0 0 chr17 15480842 15481141 -74023412 - AluSc SINE Alu -10 299 1 296 216 64 105 chr17 15481141 15481184 -74023369 - MER67D LTR ERV1 -122 421 378 180 0 0 0 chr17 15481185 15481205 -74023348 + (A)n Simple_repeat Simple_repeat 1 20 0 303 331 16 16 chr17 15481308 15481432 -74023121 - MER67B LTR ERV1 -500 161 38 243 178 0 110 chr17 15481466 15481539 -74023014 - MIR SINE MIR -155 107 43 253 403 52 0 chr17 15482469 15482603 -74021950 - MIR SINE MIR -38 224 84 264 288 44 79 chr17 15482625 15482854 -74021699 + L2 LINE L2 2991 3211 -102 2082 133 0 3 chr17 15482872 15483165 -74021388 + AluSx SINE Alu 1 292 -20 521 214 61 46 chr17 15483174 15483305 -74021248 - MER5A DNA MER1_type -53 136 4 268 291 35 12 chr17 15483369 15483455 -74021098 + L2 LINE L2 3185 3272 0 4532 116 317 36 chr17 15483818 15484816 -74019737 + MER52C LTR ERV1 1 1278 0 192 331 127 28 chr17 15485038 15485180 -74019373 + L2 LINE L2 3117 3272 0 234 250 12 48 chr17 15485253 15485337 -74019216 + MIR SINE MIR 172 252 -10 1871 152 0 26 chr17 15485752 15485888 -74018665 + AluSx SINE Alu 1 139 -173 2247 86 0 4 chr17 15485888 15486218 -74018335 + AluSg SINE Alu 1 329 0 1871 152 0 26 chr17 15486218 15486389 -74018164 + AluSx SINE Alu 139 301 -11 2132 76 10 24 chr17 15486429 15486767 -74017786 - AluSp SINE Alu 0 334 1 643 198 9 0 chr17 15486802 15486913 -74017640 + MER5A DNA MER1_type 4 115 -74 234 277 141 67 chr17 15486913 15487062 -74017491 - MIR SINE MIR -90 172 22 281 237 252 0 chr17 15487277 15487416 -74017137 - MER5A DNA MER1_type -6 183 10 202 214 0 24 chr17 15487542 15487584 -74016969 + GA-rich Low_complexity Low_complexity 1 41 0 299 331 154 37 chr17 15488657 15488763 -74015790 + L2 LINE L2 2866 2958 -314 2593 49 0 3 chr17 15488763 15489069 -74015484 - AluY SINE Alu -6 305 1 299 331 154 37 chr17 15489069 15489312 -74015241 + L2 LINE L2 2958 3256 -16 492 263 75 38 chr17 15489679 15489892 -74014661 - LTR16C LTR ERVL 0 491 271 1245 169 44 32 chr17 15489924 15490173 -74014380 - L1ME LINE L1 -389 5777 5526 2268 246 75 27 chr17 15490234 15491050 -74013503 - L1ME LINE L1 -931 5215 4361 607 82 31 31 chr17 15491488 15491585 -74012968 + AluY SINE Alu 2 98 -213 2281 85 34 3 chr17 15491793 15492086 -74012467 + AluY SINE Alu 1 302 -9 623 40 40 0 chr17 15492089 15492165 -74012388 + MADE1 DNA Mariner 1 79 -1 515 184 76 89 chr17 15492290 15492448 -74012105 + MLT1F1 LTR MaLR 412 567 0 435 268 39 0 chr17 15492484 15492611 -74011942 - MIR SINE MIR -13 249 118 605 215 35 113 chr17 15492738 15492980 -74011573 + MER106B DNA MER1_type 2 236 0 277 269 45 60 chr17 15493682 15493816 -74010737 - MIR3 SINE MIR -74 134 3 1051 188 121 21 chr17 15494326 15494566 -74009987 - MER45B DNA AcHobo 0 1040 777 6889 114 13 4 chr17 15494567 15495699 -74008854 + L1MA5A LINE L1 5156 6297 0 3480 203 97 14 chr17 15495703 15496428 -74008125 - MER45B DNA AcHobo -255 785 1 446 290 90 7 chr17 15496570 15496715 -74007838 - MER5B DNA MER1_type -5 173 17 1384 209 14 37 chr17 15497317 15497613 -74006940 + AluJo SINE Alu 2 290 -12 259 270 138 57 chr17 15497709 15497868 -74006685 - MER5B DNA MER1_type 0 178 7 276 250 159 0 chr17 15497975 15498063 -74006490 - L1ME4a LINE L1 -56 6065 5964 2319 104 0 0 chr17 15498200 15498509 -74006044 - AluSc SINE Alu 0 309 1 21 0 0 0 chr17 15498519 15498540 -74006013 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 15498568 15498603 -74005950 + AT_rich Low_complexity Low_complexity 1 35 0 507 344 108 38 chr17 15498606 15499086 -74005467 + L2 LINE L2 2121 2634 -680 1866 174 0 3 chr17 15499207 15499517 -74005036 + AluJb SINE Alu 1 309 -3 2387 55 3 52 chr17 15499807 15500133 -74004420 + AluY SINE Alu 1 310 -1 865 228 61 105 chr17 15500343 15500873 -74003680 + L1M4 LINE L1 3873 4376 -1770 2097 144 0 7 chr17 15500873 15501179 -74003374 + AluJo SINE Alu 1 304 -8 865 228 61 105 chr17 15501179 15501236 -74003317 + L1M4 LINE L1 4376 4434 -1712 566 237 0 0 chr17 15501319 15501433 -74003120 + L2 LINE L2 2424 2537 -777 1185 205 146 10 chr17 15501482 15501784 -74002769 - MER2 DNA MER2_type -1 343 1 1144 239 135 88 chr17 15501876 15502511 -74002042 + LTR41 LTR ERVL 31 695 -78 277 242 15 0 chr17 15502600 15502666 -74001887 + LTR41 LTR ERVL 706 772 -1 255 388 0 0 chr17 15502668 15502748 -74001805 - LTR16C LTR ERVL -138 353 274 840 304 104 47 chr17 15503398 15503625 -74000928 - ERVL LTR ERVL -726 5038 4825 2234 92 7 23 chr17 15503625 15503793 -74000760 - AluSq SINE Alu -12 301 132 183 42 0 0 chr17 15503793 15503817 -74000736 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2221 78 4 0 chr17 15503817 15504098 -74000455 - AluY SINE Alu -29 282 1 2234 92 7 23 chr17 15504098 15504234 -74000319 - AluSq SINE Alu -179 134 1 840 304 104 47 chr17 15504234 15504304 -74000249 - ERVL LTR ERVL -939 4825 4760 760 236 44 6 chr17 15504304 15504486 -74000067 - MER5A DNA MER1_type 0 189 1 840 304 104 47 chr17 15504486 15504763 -73999790 - ERVL LTR ERVL -1004 4760 4430 855 252 36 65 chr17 15504891 15505169 -73999384 + L2 LINE L2 2533 2802 -512 2396 136 128 8 chr17 15507271 15507653 -73996900 + MSTA LTR MaLR 1 428 0 204 353 201 0 chr17 15507756 15507895 -73996658 + MIR SINE MIR 46 212 -50 541 240 24 16 chr17 15508058 15508183 -73996370 - MER5B DNA MER1_type -52 126 1 422 207 186 21 chr17 15508203 15508348 -73996205 + MER5A DNA MER1_type 18 186 -3 354 265 114 8 chr17 15508489 15508621 -73995932 - MIR SINE MIR -70 192 47 2049 209 93 28 chr17 15509562 15510068 -73994485 + MLT1F LTR MaLR 1 539 -3 463 294 78 80 chr17 15510201 15510599 -73993954 + L2 LINE L2 2856 3252 -61 814 204 11 11 chr17 15510665 15510841 -73993712 + FRAM SINE Alu 1 175 -1 289 298 39 19 chr17 15512067 15512171 -73992382 - MIR3 SINE MIR -1 207 102 1930 209 117 49 chr17 15514435 15515067 -73989486 - L1ME1 LINE L1 -21 6145 5471 373 137 10 75 chr17 15515109 15515419 -73989134 + (CATATA)n Simple_repeat Simple_repeat 1 289 0 321 160 50 26 chr17 15515421 15515726 -73988827 + (TA)n Simple_repeat Simple_repeat 1 312 0 3420 143 40 51 chr17 15515767 15516418 -73988135 - LTR48B LTR ERV1 0 644 1 830 193 40 0 chr17 15516459 15516609 -73987944 - FRAM SINE Alu -17 159 4 298 149 0 0 chr17 15516610 15516657 -73987896 - L1ME1 LINE L1 -719 5443 5397 6878 188 176 19 chr17 15516658 15518175 -73986378 + MER52A LTR ERV1 1 1755 0 1135 253 84 83 chr17 15518855 15519182 -73985371 - L1MC4 LINE L1 -92 7950 7625 2207 121 0 0 chr17 15519182 15519479 -73985074 - AluSx SINE Alu -15 297 1 1135 253 84 83 chr17 15519479 15520679 -73983874 - L1MC4 LINE L1 -417 7625 6428 368 231 36 159 chr17 15520741 15520992 -73983561 - L1MC4 LINE L1 -1862 5946 5727 1772 116 4 8 chr17 15521107 15521387 -73983166 - AluSx SINE Alu 0 311 33 296 342 21 12 chr17 15521448 15521688 -73982865 - L1 LINE L1 -1513 4633 4392 310 324 130 58 chr17 15521793 15522207 -73982346 + L2 LINE L2 2804 3247 -25 746 214 10 57 chr17 15522897 15523089 -73981464 - MER5A DNA MER1_type 0 189 7 180 0 0 0 chr17 15524268 15524288 -73980265 + (GA)n Simple_repeat Simple_repeat 2 21 0 188 226 48 32 chr17 15524457 15524519 -73980034 - MIR SINE MIR -119 143 81 270 318 0 0 chr17 15526162 15526250 -73978303 - MIR SINE MIR 0 262 175 209 375 14 0 chr17 15526331 15526403 -73978150 + L2 LINE L2 2742 2814 -500 2082 135 16 97 chr17 15526417 15526543 -73978010 + MER57A LTR ERV1 8 143 -260 1553 180 7 11 chr17 15526543 15526826 -73977727 - AluJb SINE Alu -24 288 7 2082 135 16 97 chr17 15526826 15527130 -73977423 + MER57A LTR ERV1 143 403 0 583 319 77 39 chr17 15527130 15527519 -73977034 + L2 LINE L2 2908 3311 -2 439 240 125 68 chr17 15527628 15527820 -73976733 + MER63A DNA MER1_type 4 206 -4 247 340 21 21 chr17 15528429 15528523 -73976030 - MIR SINE MIR -115 147 54 1027 157 0 6 chr17 15528673 15528832 -73975721 + AluJb SINE Alu 125 282 -30 198 0 0 0 chr17 15528834 15528856 -73975697 + (CA)n Simple_repeat Simple_repeat 2 23 0 283 311 68 17 chr17 15529505 15529682 -73974871 - L1MC5 LINE L1 -474 7487 7302 250 282 70 35 chr17 15530158 15530300 -73974253 + HAL1b LINE L1 765 911 -437 833 316 82 28 chr17 15530630 15531096 -73973457 - LTR16C LTR ERVL 0 491 1 3133 167 59 26 chr17 15531123 15531213 -73973340 - MER39B LTR ERV1 -4 649 563 2336 75 0 0 chr17 15531213 15531547 -73973006 - AluSc SINE Alu 0 334 1 3133 167 59 26 chr17 15531547 15531653 -73972900 - MER39B LTR ERV1 -90 563 462 2195 109 3 0 chr17 15531653 15531937 -73972616 + AluSx SINE Alu 1 285 -27 231 36 0 0 chr17 15531940 15531968 -73972585 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 3133 167 59 26 chr17 15531968 15532388 -73972165 - MER39B LTR ERV1 -192 461 6 3374 29 3 5 chr17 15532500 15532879 -73971674 - L1PA3 LINE L1 -3 6152 5775 404 282 32 51 chr17 15533280 15533436 -73971117 + L2 LINE L2 2945 3097 -216 583 290 38 6 chr17 15533527 15533710 -73970843 - LTR33 LTR ERVL -310 211 23 1831 289 42 20 chr17 15533710 15534240 -73970313 + MLT1H LTR MaLR 1 565 -2 2173 142 134 11 chr17 15535024 15535405 -73969148 - MSTA LTR MaLR 0 428 1 510 351 0 0 chr17 15535588 15535753 -73968800 - MIR3 SINE MIR -10 198 34 1758 108 46 81 chr17 15536040 15536363 -73968190 - AluJo SINE Alu 0 312 1 217 250 0 78 chr17 15536365 15536429 -73968124 - L2 LINE L2 -3 3310 3252 575 252 75 0 chr17 15536477 15536636 -73967917 - MLT1I LTR MaLR 0 409 239 21 0 0 0 chr17 15537539 15537560 -73966993 + AT_rich Low_complexity Low_complexity 1 21 0 240 239 114 42 chr17 15537587 15537754 -73966799 - L1ME4a LINE L1 -35 6086 5908 418 301 102 34 chr17 15538167 15538319 -73966234 - HAL1b LINE L1 -819 529 354 1199 133 133 15 chr17 15538319 15538514 -73966039 + MER20 DNA MER1_type 1 218 -1 418 301 102 34 chr17 15538514 15538597 -73965956 - HAL1b LINE L1 -994 354 278 3713 144 32 18 chr17 15539608 15540226 -73964327 + L1MB3 LINE L1 5557 6183 0 228 322 79 57 chr17 15540266 15540620 -73963933 + L1MCc LINE L1 33 394 -6029 * 5075 262 89 49 chr17 15540613 15540687 -73963866 + L1M4 LINE L1 2725 2795 -3351 1721 178 3 7 chr17 15540687 15540990 -73963563 + AluJb SINE Alu 1 302 -10 5075 262 89 49 chr17 15540990 15543270 -73961283 + L1M4 LINE L1 2795 5174 -972 785 128 8 0 chr17 15544227 15544352 -73960201 + AluSg/x SINE Alu 187 312 0 214 270 95 16 chr17 15544789 15544852 -73959701 + L2 LINE L2 3147 3214 -58 257 335 55 30 chr17 15544877 15545041 -73959512 + L2 LINE L2 2530 2697 -617 282 282 51 68 chr17 15545213 15545330 -73959223 - L2 LINE L2 0 3313 3199 585 275 70 88 chr17 15545446 15545900 -73958653 + LTR33A LTR ERVL 64 509 -14 435 196 142 20 chr17 15546262 15546333 -73958220 + LTR41 LTR ERVL 1 62 -711 1085 155 0 0 chr17 15546333 15546514 -73958039 - L1MA4 LINE L1 -3 6297 6117 435 196 142 20 chr17 15546514 15546590 -73957963 + LTR41 LTR ERVL 62 166 -607 916 255 27 75 chr17 15546721 15547094 -73957459 + LTR41 LTR ERVL 409 763 -10 1993 154 67 14 chr17 15547201 15547572 -73956981 - L1MC1 LINE L1 0 6333 5943 347 267 46 6 chr17 15547574 15547710 -73956843 + HERVL LTR ERVL 4688 4765 -889 306 282 47 0 chr17 15547864 15547949 -73956604 + LTR33A LTR ERVL 346 434 -89 354 282 45 86 chr17 15548047 15548292 -73956261 + L2 LINE L2 3079 3313 0 775 313 81 29 chr17 15548334 15548926 -73955627 + L1ME3 LINE L1 4560 5182 -964 193 143 71 48 chr17 15548991 15549033 -73955520 + MIR SINE MIR 152 194 -68 30 27 0 0 chr17 15549199 15549236 -73955317 + AT_rich Low_complexity Low_complexity 1 37 0 604 294 91 34 chr17 15549305 15549801 -73954752 + L1ME3 LINE L1 5306 5829 -333 7427 153 97 10 chr17 15550622 15550829 -73953724 - L1PA15 LINE L1 -40 6125 5937 2028 88 0 19 chr17 15550829 15551089 -73953464 + AluSg SINE Alu 39 293 -17 7427 153 97 10 chr17 15551089 15552334 -73952219 - L1PA15 LINE L1 -228 5937 4801 1946 156 3 10 chr17 15552334 15552648 -73951905 - AluSx SINE Alu 0 312 1 7427 153 97 10 chr17 15552648 15553547 -73951006 - L1PA15 LINE L1 -1364 4801 3507 2016 76 4 0 chr17 15553608 15553859 -73950694 + AluSg SINE Alu 37 288 -22 445 279 100 30 chr17 15554437 15554789 -73949764 - L1MC4a LINE L1 -1882 5926 5515 * 1541 238 3 20 chr17 15554784 15555141 -73949412 - L1 LINE L1 -1030 5116 4766 963 145 54 6 chr17 15555139 15555305 -73949248 + L1 LINE L1 3800 3973 -2173 * 1958 207 42 42 chr17 15555300 15555870 -73948683 + L1 LINE L1 4190 4759 -1387 543 252 70 68 chr17 15555918 15556347 -73948206 - L1MEc LINE L1 -2946 3436 3007 585 271 91 62 chr17 15556396 15556954 -73947599 - L1MEc LINE L1 -4553 1912 1254 1344 238 140 53 chr17 15557130 15557622 -73946931 + MLT1F LTR MaLR 8 542 0 2855 146 17 0 chr17 15557820 15558239 -73946314 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr17 15558516 15558544 -73946009 + AT_rich Low_complexity Low_complexity 1 28 0 1062 168 5 41 chr17 15559687 15559883 -73944670 + MER5A DNA MER1_type 1 189 0 415 300 8 0 chr17 15560783 15560903 -73943650 + MIR3 SINE MIR 70 190 -18 919 193 0 101 chr17 15561593 15561811 -73942742 + MER63A DNA MER1_type 8 203 -7 448 301 41 0 chr17 15561819 15561965 -73942588 - MIR SINE MIR -110 152 1 2128 93 4 4 chr17 15563740 15564019 -73940534 - AluSg SINE Alu -31 279 1 876 167 119 0 chr17 15564203 15564371 -73940182 - MER5A DNA MER1_type -1 188 1 904 250 17 30 chr17 15564891 15565127 -73939426 - MIR SINE MIR -22 240 8 689 279 6 12 chr17 15565169 15565341 -73939212 + MER5B DNA MER1_type 8 178 0 2279 88 3 31 chr17 15565399 15565717 -73938836 - AluSg SINE Alu -1 309 1 187 293 61 40 chr17 15566539 15566638 -73937915 - MIR SINE MIR -112 150 50 975 201 17 0 chr17 15566655 15566829 -73937724 - MER45A DNA AcHobo -1 177 1 455 245 10 0 chr17 15566843 15566941 -73937612 + MER5A DNA MER1_type 7 105 -84 2976 141 44 96 chr17 15567188 15567805 -73936748 + LTR12 LTR ERV1 1 585 -129 2050 185 31 83 chr17 15567922 15568250 -73936303 - LTR32 LTR ERVL 0 471 128 1763 83 147 4 chr17 15568250 15568502 -73936051 + AluSg SINE Alu 1 288 -22 2050 185 31 83 chr17 15568502 15568610 -73935943 - LTR32 LTR ERVL -343 128 60 2479 81 0 0 chr17 15568610 15568918 -73935635 - AluY SINE Alu -3 308 1 2050 185 31 83 chr17 15568918 15568962 -73935591 - LTR32 LTR ERVL -411 60 15 2098 203 123 0 chr17 15569316 15569764 -73934789 + MLT1D LTR MaLR 3 505 0 485 286 78 19 chr17 15570377 15570531 -73934022 + MER5B DNA MER1_type 1 163 -15 2713 124 8 0 chr17 15572300 15572670 -73931883 + THE1C LTR MaLR 1 373 -2 27 73 0 0 chr17 15572748 15572803 -73931750 + AT_rich Low_complexity Low_complexity 1 55 0 342 141 127 0 chr17 15572911 15572982 -73931571 + MLT1A1 LTR MaLR 75 154 -211 1182 150 73 5 chr17 15572986 15573206 -73931347 + L1MA8 LINE L1 6003 6237 -54 882 198 71 19 chr17 15573241 15573453 -73931100 + MLT1A1 LTR MaLR 140 362 -3 3019 128 46 51 chr17 15574336 15574453 -73930100 - L1MA5A LINE L1 0 6297 6181 2468 83 0 3 chr17 15574453 15574765 -73929788 - AluY SINE Alu 0 311 1 3019 128 46 51 chr17 15574765 15575216 -73929337 - L1MA5A LINE L1 -116 6181 5732 2217 107 0 7 chr17 15576607 15576898 -73927655 + AluSc SINE Alu 1 289 -20 2832 16 0 0 chr17 15577095 15577403 -73927150 - AluYa5 SINE Alu -3 308 1 617 261 179 28 chr17 15577573 15577925 -73926628 - MLT1F LTR MaLR -3 539 135 184 212 30 15 chr17 15578016 15578082 -73926471 + GA-rich Low_complexity Low_complexity 2 68 0 403 233 87 10 chr17 15578237 15578340 -73926213 - MIR SINE MIR -63 145 35 187 266 65 129 chr17 15578320 15578444 -73926109 - MER5B DNA MER1_type -62 116 1 * 445 134 0 0 chr17 15579903 15579970 -73924583 + L1MB7 LINE L1 6054 6120 -64 1095 150 21 27 chr17 15580234 15580421 -73924132 - L1PA16 LINE L1 -1 6165 5980 790 273 48 17 chr17 15580757 15580988 -73923565 + MIR SINE MIR 14 251 -11 252 59 0 0 chr17 15581092 15581126 -73923427 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1105 189 38 14 chr17 15581143 15581355 -73923198 - AluJo SINE Alu -10 302 86 420 280 140 40 chr17 15581356 15581656 -73922897 + L1MC4a LINE L1 5582 5911 -1897 24 32 0 0 chr17 15581667 15581698 -73922855 + AT_rich Low_complexity Low_complexity 1 31 0 637 317 77 39 chr17 15582862 15583111 -73921442 + L2 LINE L2 2931 3200 -113 264 59 0 0 chr17 15583111 15583145 -73921408 + (CA)n Simple_repeat Simple_repeat 2 35 0 637 317 77 39 chr17 15583145 15583258 -73921295 + L2 LINE L2 3200 3307 -6 207 0 0 0 chr17 15584334 15584357 -73920196 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 200 133 0 0 chr17 15584709 15584739 -73919814 - MER5A DNA MER1_type -156 33 4 307 381 32 0 chr17 15584804 15584930 -73919623 - L2 LINE L2 0 3272 3143 250 378 49 5 chr17 15585158 15585343 -73919210 - L2 LINE L2 -402 2912 2720 234 128 0 0 chr17 15585379 15585418 -73919135 + (TG)n Simple_repeat Simple_repeat 2 40 0 361 272 112 88 chr17 15585449 15585502 -73919051 - L2 LINE L2 -837 2477 2427 2243 168 80 15 chr17 15585502 15585902 -73918651 - MSTB LTR MaLR 0 426 1 361 272 112 88 chr17 15585902 15586098 -73918455 - L2 LINE L2 -887 2427 2222 243 302 99 62 chr17 15586109 15586301 -73918252 + MIR SINE MIR 8 206 -56 308 279 266 34 chr17 15586345 15586984 -73917569 - L2 LINE L2 -1092 2222 1436 215 253 108 36 chr17 15587721 15587804 -73916749 + L2 LINE L2 3163 3251 -21 438 284 121 45 chr17 15588137 15588663 -73915890 - L1MC/D LINE L1 -317 5804 5232 198 0 0 0 chr17 15590050 15590072 -73914481 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7410 52 11 0 chr17 15590072 15591184 -73913369 - L1PA7 LINE L1 -18 6136 5017 9254 84 13 0 chr17 15591185 15592426 -73912127 + L1PA7 LINE L1 3755 5011 -1135 259 237 13 53 chr17 15594338 15594414 -73910139 + MIR SINE MIR 13 85 -177 2011 230 101 12 chr17 15594484 15594980 -73909573 + MLT1F LTR MaLR 3 542 0 366 242 53 61 chr17 15596501 15596773 -73907780 + L1ME LINE L1 5455 5830 -291 1864 142 35 10 chr17 15597667 15597956 -73906597 + AluJb SINE Alu 1 296 -16 222 318 79 32 chr17 15598185 15598311 -73906242 + MIR SINE MIR 81 212 -50 450 305 76 25 chr17 15599254 15599490 -73905063 - L1ME LINE L1 -343 5778 5531 242 164 55 36 chr17 15600694 15600749 -73903804 + MER20B DNA MER1_type 88 143 -640 4721 203 71 28 chr17 15601134 15601582 -73902971 + L1M4 LINE L1 3897 4324 -1854 1615 170 0 42 chr17 15601582 15601893 -73902660 + AluSx SINE Alu 1 298 -14 4721 203 71 28 chr17 15601893 15602623 -73901930 + L1M4 LINE L1 4324 5021 -1157 2195 97 0 10 chr17 15602623 15602912 -73901641 + AluSx SINE Alu 1 286 -26 4721 203 71 28 chr17 15602912 15603024 -73901529 + L1M4 LINE L1 5021 5127 -1051 2339 159 20 32 chr17 15603024 15603463 -73901090 - Tigger2a DNA MER2_type 0 434 1 4721 203 71 28 chr17 15603463 15603868 -73900685 + L1M4 LINE L1 5127 5662 -516 354 278 68 15 chr17 15603870 15604003 -73900550 - MLT1I LTR MaLR -267 142 3 204 125 0 0 chr17 15604694 15604726 -73899827 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 229 229 0 16 chr17 15604730 15604791 -73899762 + CT-rich Low_complexity Low_complexity 2 61 0 501 347 62 39 chr17 15605219 15605738 -73898815 + L2 LINE L2 2770 3304 -9 29 28 0 0 chr17 15606349 15606385 -73898168 + AT_rich Low_complexity Low_complexity 1 36 0 2381 91 0 0 chr17 15607535 15607832 -73896721 - AluSp SINE Alu -16 297 1 4177 213 56 43 chr17 15608411 15609335 -73895218 - L1M4 LINE L1 -5453 1089 148 405 0 0 0 chr17 15609335 15609380 -73895173 + (TG)n Simple_repeat Simple_repeat 1 45 0 4177 213 56 43 chr17 15609380 15609529 -73895024 - L1M4 LINE L1 -6394 148 2 962 251 138 3 chr17 15609536 15609914 -73894639 - L1ME LINE L1 -816 5330 4902 3724 224 50 13 chr17 15609936 15610128 -73894425 + L1MB4 LINE L1 4404 4588 -1592 207 0 0 0 chr17 15610128 15610151 -73894402 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2097 116 0 0 chr17 15610153 15610437 -73894116 - AluSg SINE Alu -26 284 1 3724 224 50 13 chr17 15610437 15610768 -73893785 + L1MB4 LINE L1 4588 4906 -1274 180 0 0 0 chr17 15610768 15610788 -73893765 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 3724 224 50 13 chr17 15610788 15611968 -73892585 + L1MB4 LINE L1 4906 6174 -6 459 120 0 0 chr17 15611997 15612072 -73892481 + L1MB8 LINE L1 6104 6178 0 2406 103 0 0 chr17 15612285 15612596 -73891957 - AluSq SINE Alu -2 311 1 12319 211 23 21 chr17 15612618 15615906 -73888647 - L1PA15-16 LINE L1 -835 6014 2719 2456 128 8 8 chr17 15615906 15616281 -73888272 - THE1C LTR MaLR 0 375 1 7255 115 198 44 chr17 15616281 15617650 -73886903 - THE1C-int LTR MaLR 0 1580 1 2426 103 35 16 chr17 15617650 15618018 -73886535 - THE1C LTR MaLR 0 375 1 11115 158 13 7 chr17 15618018 15620498 -73884055 - L1PA15-16 LINE L1 -4126 2723 5 1188 251 64 103 chr17 15620508 15621052 -73883501 - L1MEc LINE L1 -3113 3102 2538 249 108 0 0 chr17 15621052 15621089 -73883464 + (CA)n Simple_repeat Simple_repeat 2 38 0 1188 251 64 103 chr17 15621089 15622820 -73881733 - L1MEc LINE L1 -3677 2538 956 22 0 0 0 chr17 15622870 15622892 -73881661 + AT_rich Low_complexity Low_complexity 1 22 0 233 224 26 40 chr17 15622930 15623006 -73881547 - L1MEc LINE L1 -5475 730 656 438 333 41 54 chr17 15623343 15623658 -73880895 - L1MEc LINE L1 -5972 424 114 3066 247 56 24 chr17 15624066 15624344 -73880209 + L1MDa LINE L1 2061 2329 -4211 182 37 37 0 chr17 15624344 15624371 -73880182 + (TA)n Simple_repeat Simple_repeat 1 28 0 3066 247 56 24 chr17 15624371 15625520 -73879033 + L1MDa LINE L1 2329 3542 -2998 1869 130 20 0 chr17 15625711 15626011 -73878542 + L1PA13 LINE L1 5858 6163 0 437 249 69 40 chr17 15626169 15626342 -73878211 + HAL1b LINE L1 427 604 -744 2120 114 3 7 chr17 15626362 15626684 -73877869 - AluSx SINE Alu 0 312 1 45 62 0 0 chr17 15626803 15626883 -73877670 + AT_rich Low_complexity Low_complexity 1 80 0 2220 232 47 82 chr17 15627067 15628155 -73876398 + L1MC5 LINE L1 6476 7529 -432 311 250 29 93 chr17 15628243 15628441 -73876112 + L1ME3A LINE L1 5955 6137 -25 4379 159 47 34 chr17 15628612 15630179 -73874374 - L1PB4 LINE L1 -2 6154 4558 579 310 114 53 chr17 15630552 15630913 -73873640 + MLT1K LTR MaLR 189 571 -17 350 57 19 0 chr17 15631159 15631212 -73873341 + (GA)n Simple_repeat Simple_repeat 1 54 0 310 264 61 27 chr17 15631634 15631782 -73872771 - L1M4 LINE L1 -2268 3878 3726 27 49 0 0 chr17 15632069 15632110 -73872443 + AT_rich Low_complexity Low_complexity 1 41 0 2223 123 0 0 chr17 15632550 15632850 -73871703 - AluY SINE Alu -11 300 1 29 78 0 0 chr17 15632895 15632959 -73871594 + AT_rich Low_complexity Low_complexity 1 64 0 796 293 96 9 chr17 15633122 15633446 -73871107 + MLT1K LTR MaLR 208 559 -29 21 0 0 0 chr17 15634612 15634633 -73869920 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 15635650 15635671 -73868882 + AT_rich Low_complexity Low_complexity 1 21 0 2162 99 0 30 chr17 15639370 15639674 -73864879 + AluSg SINE Alu 1 295 -15 1215 174 54 9 chr17 15640065 15640289 -73864264 - MSTA LTR MaLR 0 428 195 1276 100 21 0 chr17 15640289 15640479 -73864074 - L1P LINE L1 -805 5341 5148 491 78 0 65 chr17 15640478 15640555 -73863998 + L1PA8A LINE L1 5836 5907 -224 * 1000 117 56 6 chr17 15640587 15640749 -73863804 - MSTA LTR MaLR -258 170 1 33 25 0 0 chr17 15640750 15640790 -73863763 + AT_rich Low_complexity Low_complexity 1 40 0 28 0 0 0 chr17 15641084 15641112 -73863441 + AT_rich Low_complexity Low_complexity 1 28 0 235 324 67 0 chr17 15642610 15642715 -73861838 + HAL1b LINE L1 452 563 -785 949 206 148 37 chr17 15642722 15643047 -73861506 - MER93b LTR ERV1 -1 372 12 251 308 0 13 chr17 15643195 15643273 -73861280 + L2 LINE L2 3234 3310 -3 213 121 0 0 chr17 15643726 15643759 -73860794 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 702 211 161 9 chr17 15643839 15644057 -73860496 - L1MB8 LINE L1 -9 6169 5919 717 286 18 0 chr17 15644745 15644972 -73859581 - L1ME3A LINE L1 -125 6045 5815 320 289 44 92 chr17 15645371 15645644 -73858909 + L1MB5 LINE L1 8 267 -6275 3830 241 27 46 chr17 15645827 15647522 -73857031 + L1MB5 LINE L1 498 2167 -4479 * 4659 225 48 40 chr17 15647519 15648337 -73856216 + L1MB5 LINE L1 4258 5068 -1604 2278 114 0 0 chr17 15648337 15648635 -73855918 - AluSx SINE Alu -14 298 1 567 186 8 54 chr17 15648635 15648764 -73855789 - AluJo/FLAM SINE Alu -179 123 1 4659 225 48 40 chr17 15648764 15648948 -73855605 + L1MB5 LINE L1 5068 5249 -1423 2552 150 16 41 chr17 15648948 15649461 -73855092 + L1MA7 LINE L1 5791 6290 -1 4659 225 48 40 chr17 15649461 15650337 -73854216 + L1MB5 LINE L1 5249 6166 -506 1941 143 0 29 chr17 15650337 15650644 -73853909 + AluSx SINE Alu 1 298 -14 4659 225 48 40 chr17 15650644 15651148 -73853405 + L1MB5 LINE L1 6166 6665 -7 203 136 45 0 chr17 15652497 15652541 -73852012 + CT-rich Low_complexity Low_complexity 3 48 0 349 182 111 30 chr17 15652667 15652766 -73851787 + MIR SINE MIR 156 262 0 233 182 0 0 chr17 15654497 15654541 -73850012 + MIR SINE MIR 206 249 -13 314 286 36 36 chr17 15655761 15655873 -73848680 - MIR SINE MIR -63 145 34 1062 247 80 21 chr17 15656023 15656400 -73848153 - HAL1b LINE L1 -739 609 211 470 340 82 10 chr17 15657190 15657384 -73847169 + MIR SINE MIR 53 260 -2 499 341 105 18 chr17 15658244 15658709 -73845844 - L2 LINE L2 -49 3264 2764 281 261 56 50 chr17 15659031 15659192 -73845361 + MIR3 SINE MIR 39 200 -8 212 333 45 0 chr17 15660068 15660134 -73844419 + MIR SINE MIR 12 80 -182 249 308 12 136 chr17 15660376 15660545 -73844008 - L2 LINE L2 -87 3185 3038 724 291 78 48 chr17 15660647 15660740 -73843813 + HAL1 LINE L1 1984 2073 -434 2285 62 38 0 chr17 15660740 15661028 -73843525 + AluY SINE Alu 1 299 -12 724 291 78 48 chr17 15661028 15661436 -73843117 + HAL1 LINE L1 2073 2500 -7 227 140 20 0 chr17 15661685 15661735 -73842818 + GA-rich Low_complexity Low_complexity 2 52 0 2135 141 0 0 chr17 15662211 15662509 -73842044 + AluSx SINE Alu 1 298 -14 2491 57 0 0 chr17 15663273 15663570 -73840983 + AluY SINE Alu 1 297 -14 305 318 147 28 chr17 15663582 15663834 -73840719 + HAL1b LINE L1 392 673 -675 23 0 0 0 chr17 15664981 15665004 -73839549 + AT_rich Low_complexity Low_complexity 1 23 0 457 355 58 24 chr17 15665611 15666025 -73838528 + HERV16 LTR ERVL 173 600 -4396 3639 344 77 24 chr17 15666878 15669426 -73835127 - HERV16 LTR ERVL -661 5103 2422 980 354 18 11 chr17 15669458 15669899 -73834654 - HERV16 LTR ERVL -3355 2299 1856 499 298 32 11 chr17 15669914 15670102 -73834451 - HERV16 LTR ERVL -4803 193 2 584 251 84 48 chr17 15670104 15670331 -73834222 - LTR16A1 LTR ERVL -1 456 222 522 263 136 24 chr17 15670539 15670752 -73833801 + MIR SINE MIR 23 259 -3 332 307 114 18 chr17 15671310 15671448 -73833105 + MIR3 SINE MIR 10 168 -40 692 212 49 87 chr17 15671448 15671632 -73832921 + MER5B DNA MER1_type 2 178 0 332 307 114 18 chr17 15671632 15671659 -73832894 + MIR3 SINE MIR 168 191 -17 1384 187 37 58 chr17 15671962 15672256 -73832297 + AluJo SINE Alu 1 288 -24 441 75 25 25 chr17 15672265 15672345 -73832208 + (GAAA)n Simple_repeat Simple_repeat 1 80 0 233 128 21 0 chr17 15672363 15672410 -73832143 + GA-rich Low_complexity Low_complexity 3 50 0 2217 205 49 107 chr17 15674088 15674313 -73830240 + MER21B LTR ERV1 25 262 -601 2329 97 0 7 chr17 15674313 15674612 -73829941 + AluSx SINE Alu 1 297 -15 213 39 0 0 chr17 15674612 15674638 -73829915 + (TA)n Simple_repeat Simple_repeat 2 27 0 2217 205 49 107 chr17 15674638 15675167 -73829386 + MER21B LTR ERV1 260 736 -127 25 0 0 0 chr17 15676094 15676119 -73828434 + AT_rich Low_complexity Low_complexity 1 25 0 2279 109 0 3 chr17 15676305 15676609 -73827944 + AluSq SINE Alu 1 303 -10 195 42 0 0 chr17 15676642 15676666 -73827887 + (TG)n Simple_repeat Simple_repeat 2 25 0 360 254 197 71 chr17 15676716 15677082 -73827471 + L1MC4a LINE L1 5943 6354 -1454 2345 201 64 100 chr17 15677310 15677789 -73826764 + L1MC5 LINE L1 6546 7041 -920 2145 119 0 0 chr17 15677789 15678106 -73826447 - AluSx SINE Alu 0 317 1 2345 201 64 100 chr17 15678106 15678320 -73826233 + L1MC5 LINE L1 7041 7261 -700 1120 213 52 0 chr17 15678320 15678531 -73826022 - MER58A DNA MER1_type -2 222 1 2345 201 64 100 chr17 15678531 15678867 -73825686 + L1MC5 LINE L1 7261 7545 -416 352 329 0 67 chr17 15681421 15681570 -73822983 + MIR SINE MIR 5 143 -119 3386 224 46 20 chr17 15681595 15682362 -73822191 + MER21B LTR ERV1 19 805 -58 275 317 30 0 chr17 15682384 15682485 -73822068 + MIR SINE MIR 159 262 0 2151 119 10 0 chr17 15682731 15683033 -73821520 + AluSx SINE Alu 1 305 -7 229 286 0 26 chr17 15683036 15683113 -73821440 - Charlie7 DNA MER1_type -49 2563 2489 * 309 278 93 13 chr17 15683086 15683237 -73821316 - Charlie7 DNA MER1_type -2448 164 2 349 340 58 47 chr17 15684632 15684823 -73819730 + MIR3 SINE MIR 11 203 -5 203 245 20 0 chr17 15685675 15685724 -73818829 + GA-rich Low_complexity Low_complexity 1 50 0 198 0 0 0 chr17 15685751 15685773 -73818780 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2331 106 0 0 chr17 15685776 15686078 -73818475 - AluSg SINE Alu -8 302 1 396 290 69 65 chr17 15686390 15686621 -73817932 - L2 LINE L2 -5 3308 3077 478 263 59 13 chr17 15686643 15686795 -73817758 + MIR SINE MIR 69 227 -35 580 239 33 33 chr17 15686806 15686990 -73817563 + MLT1F LTR MaLR 354 537 -5 2404 192 84 6 chr17 15687122 15687612 -73816941 - MER74A LTR ERVL -30 528 1 2251 116 0 0 chr17 15688680 15688973 -73815580 - AluSg SINE Alu -17 293 1 194 0 39 0 chr17 15688980 15689006 -73815547 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 223 266 165 13 chr17 15689381 15689460 -73815093 - L2 LINE L2 -7 3265 3175 1934 116 0 34 chr17 15689498 15689813 -73814740 - AluSg SINE Alu 0 305 1 191 281 88 0 chr17 15691181 15691238 -73813315 - MER5A DNA MER1_type -127 62 1 303 164 99 81 chr17 15691626 15691707 -73812846 + MER8 DNA MER2_type 1 84 -163 354 277 187 19 chr17 15692227 15692382 -73812171 + MER5A DNA MER1_type 9 189 0 279 241 379 9 chr17 15692384 15692500 -73812053 + MER5B DNA MER1_type 6 164 -14 656 212 20 86 chr17 15692506 15692704 -73811849 - MER5A DNA MER1_type 0 189 5 774 186 70 6 chr17 15692730 15692886 -73811667 + MER5A DNA MER1_type 20 185 -4 1966 145 7 16 chr17 15692887 15693191 -73811362 + AluJb SINE Alu 3 303 -9 249 167 0 0 chr17 15693428 15693482 -73811071 + (TA)n Simple_repeat Simple_repeat 2 55 0 776 203 98 6 chr17 15693716 15693879 -73810674 - MER5B DNA MER1_type 0 178 1 387 278 184 31 chr17 15693879 15694134 -73810419 + MLT1L LTR MaLR 148 441 -174 449 185 12 12 chr17 15695676 15695757 -73808796 + MER90 LTR ERV1 534 614 0 240 191 0 0 chr17 15696047 15696089 -73808464 + L2 LINE L2 2427 2468 -846 192 200 0 0 chr17 15696091 15696141 -73808412 + (TA)n Simple_repeat Simple_repeat 2 51 0 2125 118 0 13 chr17 15696204 15696508 -73808045 + AluSx SINE Alu 1 300 -12 1397 219 30 16 chr17 15696523 15696869 -73807684 - MER4D LTR ERV1 -41 862 392 1767 149 28 0 chr17 15696871 15697153 -73807400 - MER49 LTR ERV1 -632 291 2 792 321 65 6 chr17 15697159 15697585 -73806968 + L2 LINE L2 2535 3004 -309 3196 39 3 0 chr17 15697684 15698046 -73806507 - L1PA5 LINE L1 0 6154 5792 369 306 16 16 chr17 15698077 15698201 -73806352 - MIR3 SINE MIR -36 172 49 22 35 0 0 chr17 15698511 15698540 -73806013 + AT_rich Low_complexity Low_complexity 1 29 0 1367 174 0 0 chr17 15698757 15698970 -73805583 + AluJb SINE Alu 84 296 -16 1199 201 64 18 chr17 15699610 15699893 -73804660 - MER39 LTR ERV1 0 707 412 849 99 7 70 chr17 15699919 15700061 -73804492 - MER50 LTR ERV1 -65 669 537 2398 144 5 5 chr17 15700080 15700448 -73804105 - L1PB1 LINE L1 -8 6143 5776 297 66 55 44 chr17 15700448 15700539 -73804014 + (TA)n Simple_repeat Simple_repeat 2 93 0 10231 179 15 6 chr17 15700540 15701826 -73802727 - L1PB1 LINE L1 -360 5791 4518 2181 114 0 0 chr17 15701826 15702116 -73802437 - AluSg SINE Alu -16 294 5 10231 179 15 6 chr17 15702116 15703579 -73800974 - L1PB1 LINE L1 -1633 4518 3025 3183 172 3 5 chr17 15703577 15704159 -73800394 + L1M4 LINE L1 2453 3033 -3113 * 2988 164 27 36 chr17 15704164 15704719 -73799834 - MER50 LTR ERV1 -184 550 1 522 258 139 43 chr17 15704719 15704925 -73799628 - MER34 LTR ERV1 -316 226 1 257 306 14 0 chr17 15705797 15705869 -73798684 + MIR SINE MIR 188 260 -2 2056 112 3 11 chr17 15706196 15706512 -73798041 - AluSq SINE Alu 0 314 1 284 257 57 0 chr17 15708128 15708198 -73796355 - L2 LINE L2 -1 3312 3239 2674 210 24 15 chr17 15709765 15710350 -73794203 - L1MD3 LINE L1 -1 7994 7405 344 207 0 69 chr17 15710350 15710437 -73794116 - MLT1F1 LTR MaLR -442 125 45 4141 236 72 19 chr17 15710484 15711685 -73792868 - L1MC3 LINE L1 -974 6811 5548 390 139 14 14 chr17 15711680 15711752 -73792801 - L1MD3 LINE L1 -195 7800 7729 * 555 344 44 59 chr17 15712156 15712743 -73791810 + L1M4 LINE L1 3250 3825 -2321 1804 148 62 45 chr17 15712743 15713101 -73791452 + MLT1A1 LTR MaLR 1 364 -1 555 344 44 59 chr17 15713101 15713242 -73791311 + L1M4 LINE L1 3825 3967 -2179 23 33 0 0 chr17 15713370 15713400 -73791153 + AT_rich Low_complexity Low_complexity 1 30 0 292 340 32 27 chr17 15713663 15713848 -73790705 + L2 LINE L2 2996 3181 -132 491 335 42 0 chr17 15713913 15714158 -73790395 - L2 LINE L2 -310 3003 2751 2079 301 168 8 chr17 15714185 15715257 -73789296 - L2 LINE L2 -926 2388 1145 209 253 25 38 chr17 15715286 15715365 -73789188 - MIR SINE MIR -111 151 74 2191 62 0 122 chr17 15717225 15717561 -73786992 - AluY SINE Alu -6 295 1 789 87 0 56 chr17 15717776 15717902 -73786651 + Tigger2a DNA MER2_type 5 123 -311 1674 126 69 11 chr17 15718026 15718303 -73786250 + Tigger2a DNA MER2_type 152 444 0 2157 113 3 13 chr17 15718341 15718651 -73785902 + AluSx SINE Alu 1 307 -5 180 0 0 0 chr17 15718941 15718961 -73785592 + (A)n Simple_repeat Simple_repeat 1 20 0 471 78 0 0 chr17 15718990 15719054 -73785499 + (GAA)n Simple_repeat Simple_repeat 1 64 0 386 221 107 41 chr17 15719171 15719293 -73785260 - LTR16C LTR ERVL 0 491 362 757 222 108 0 chr17 15719709 15719894 -73784659 - L2 LINE L2 0 3313 3109 242 292 64 43 chr17 15721347 15721513 -73783040 - MIR SINE MIR -31 177 12 2383 38 41 7 chr17 15721546 15721837 -73782716 + AluY SINE Alu 1 301 -10 23 33 0 0 chr17 15721879 15721909 -73782644 + AT_rich Low_complexity Low_complexity 1 30 0 226 309 164 7 chr17 15722603 15722755 -73781798 - L2 LINE L2 -20 3293 3118 260 356 0 0 chr17 15722915 15723016 -73781537 + L2 LINE L2 1146 1246 -2068 875 300 114 24 chr17 15723092 15723555 -73780998 - LTR33 LTR ERVL -7 514 10 866 271 106 61 chr17 15723619 15724044 -73780509 + L1ME1 LINE L1 5551 5994 -172 327 244 144 25 chr17 15724148 15724251 -73780302 + L1ME1 LINE L1 5973 6103 -63 318 26 0 0 chr17 15724251 15724290 -73780263 + (TG)n Simple_repeat Simple_repeat 2 40 0 327 244 144 25 chr17 15724290 15724346 -73780207 + L1ME1 LINE L1 6103 6151 -15 263 317 10 29 chr17 15724371 15724475 -73780078 + L2 LINE L2 1351 1452 -1862 1018 213 121 114 chr17 15724603 15725048 -73779505 - MER39 LTR ERV1 -25 682 67 229 268 47 24 chr17 15725175 15725302 -73779251 + L2 LINE L2 1708 1837 -1477 242 175 0 0 chr17 15725373 15725413 -73779140 - L1MC4 LINE L1 -73 7969 7930 186 43 0 0 chr17 15725704 15725727 -73778826 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 236 300 73 84 chr17 15725727 15726394 -73778159 - HAL1 LINE L1 -791 1716 1057 2216 105 0 10 chr17 15727146 15727442 -73777111 + AluSc SINE Alu 1 293 -16 182 333 114 0 chr17 15727819 15727951 -73776602 - L2 LINE L2 -253 3019 2873 267 31 0 0 chr17 15727977 15728009 -73776544 + (TCC)n Simple_repeat Simple_repeat 2 33 0 2144 99 3 41 chr17 15728692 15729006 -73775547 - AluSg SINE Alu -8 302 1 304 173 0 0 chr17 15729556 15729608 -73774945 + L1MC4 LINE L1 6652 6703 -1339 261 0 0 0 chr17 15729833 15729862 -73774691 + (TAG)n Simple_repeat Simple_repeat 1 29 0 2419 80 7 0 chr17 15729862 15730161 -73774392 - AluY SINE Alu -10 301 1 704 259 150 74 chr17 15731117 15731604 -73772949 + MLT1H1 LTR MaLR 32 555 0 186 344 117 16 chr17 15731922 15732050 -73772503 - L2 LINE L2 -8 3305 3165 185 152 30 0 chr17 15732178 15732211 -73772342 + MIR SINE MIR 45 78 -130 186 71 0 0 chr17 15732289 15732317 -73772236 + (T)n Simple_repeat Simple_repeat 1 28 0 4167 200 35 17 chr17 15732511 15733695 -73770858 + L1MB8 LINE L1 4961 6155 -23 2333 170 36 0 chr17 15734424 15734835 -73769718 + MSTB1 LTR MaLR 1 426 -6 183 250 23 0 chr17 15735028 15735072 -73769481 + L2 LINE L2 3251 3295 -18 354 250 42 42 chr17 15736541 15736685 -73767868 - MER103 DNA DNA -13 153 10 375 286 36 77 chr17 15737254 15737410 -73767143 + MIR SINE MIR 9 157 -105 2390 95 0 0 chr17 15737410 15737715 -73766838 + AluSp SINE Alu 2 306 -7 375 286 36 77 chr17 15737715 15737754 -73766799 + MIR SINE MIR 157 196 -66 923 250 62 102 chr17 15738719 15739139 -73765414 - L2 LINE L2 0 3313 2911 206 311 16 0 chr17 15739678 15739739 -73764814 - MER5A DNA MER1_type -68 121 60 245 350 12 12 chr17 15740770 15740850 -73763703 + MLT1K LTR MaLR 80 159 -429 319 323 38 8 chr17 15740939 15741072 -73763481 + MLT1K LTR MaLR 338 474 -114 190 340 68 49 chr17 15741170 15741332 -73763221 + MIR3 SINE MIR 42 206 -2 300 266 236 15 chr17 15742463 15742662 -73761891 + LTR33 LTR ERVL 180 422 -99 1886 223 135 24 chr17 15743103 15743569 -73760984 + MLT2B1 LTR ERVL 3 520 0 2052 135 7 7 chr17 15743834 15744137 -73760416 + AluSx SINE Alu 1 303 -9 32 0 0 0 chr17 15744137 15744169 -73760384 + AT_rich Low_complexity Low_complexity 1 32 0 597 261 6 51 chr17 15744431 15744607 -73759946 - MER5B DNA MER1_type -10 168 1 2170 114 0 0 chr17 15744706 15744995 -73759558 + AluY SINE Alu 9 297 -14 950 189 21 31 chr17 15745140 15745331 -73759222 - MER5A DNA MER1_type 0 189 1 2093 161 45 34 chr17 15746149 15746691 -73757862 + MLT2A2 LTR ERVL 1 554 0 560 186 0 62 chr17 15746971 15747100 -73757453 + MER103 DNA DNA 2 122 -44 2294 95 7 0 chr17 15747214 15747509 -73757044 + AluSx SINE Alu 1 297 -15 487 308 11 39 chr17 15748182 15748364 -73756189 - MIR SINE MIR -71 191 15 2402 87 0 0 chr17 15748656 15748967 -73755586 - AluY SINE Alu 0 311 1 207 88 0 0 chr17 15749020 15749054 -73755499 + (A)n Simple_repeat Simple_repeat 1 34 0 2537 68 0 0 chr17 15749613 15749921 -73754632 - AluY SINE Alu -3 308 1 306 148 0 0 chr17 15749937 15749991 -73754562 + (TC)n Simple_repeat Simple_repeat 1 54 0 599 280 136 18 chr17 15750559 15750924 -73753629 + LTR16C LTR ERVL 9 454 -37 644 336 42 8 chr17 15751743 15751981 -73752572 - L2 LINE L2 -387 2927 2682 347 344 169 11 chr17 15752023 15752212 -73752341 - MIR SINE MIR -22 240 22 3834 162 20 61 chr17 15752447 15752616 -73751937 - LTR39 LTR ERV1 0 783 609 2169 93 0 7 chr17 15752616 15752905 -73751648 - AluY SINE Alu -24 287 1 3834 162 20 61 chr17 15752905 15753300 -73751253 - LTR39 LTR ERV1 -174 609 199 1929 142 0 27 chr17 15753300 15753596 -73750957 + AluSx SINE Alu 1 288 -24 198 0 0 0 chr17 15753606 15753628 -73750925 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 3834 162 20 61 chr17 15753628 15753646 -73750907 - LTR39 LTR ERV1 -593 190 173 2370 129 56 8 chr17 15753646 15754042 -73750511 + L1PA15 LINE L1 5745 6159 -6 3834 162 20 61 chr17 15754042 15754263 -73750290 - LTR39 LTR ERV1 -610 173 1 2423 70 7 0 chr17 15754928 15755228 -73749325 + AluY SINE Alu 1 302 -9 234 291 0 0 chr17 15755301 15755356 -73749197 + MLT1K LTR MaLR 126 180 -408 744 187 8 0 chr17 15755397 15755520 -73749033 + FLAM_A SINE Alu 2 125 -8 233 131 0 60 chr17 15756375 15756459 -73748094 + (TTTTTG)n Simple_repeat Simple_repeat 2 80 0 1675 182 94 52 chr17 15756798 15757255 -73747298 - MER66B LTR ERV1 -10 476 1 2294 79 6 38 chr17 15757700 15758016 -73746537 - AluY SINE Alu -5 306 1 24 53 0 0 chr17 15758251 15758289 -73746264 + AT_rich Low_complexity Low_complexity 1 38 0 382 254 103 48 chr17 15758884 15759392 -73745161 + L1ME LINE L1 5294 5822 -299 21 0 0 0 chr17 15759478 15759499 -73745054 + AT_rich Low_complexity Low_complexity 1 21 0 655 266 38 76 chr17 15759916 15760179 -73744374 - MIR SINE MIR 0 262 10 822 223 16 21 chr17 15761834 15762076 -73742477 + MER33 DNA MER1_type 1 241 -83 590 295 79 27 chr17 15762069 15762476 -73742077 + LTR33 LTR ERVL 32 459 -62 * 805 222 0 0 chr17 15762986 15763139 -73741414 + FRAM SINE Alu 10 162 -14 25 0 0 0 chr17 15763461 15763486 -73741067 + AT_rich Low_complexity Low_complexity 1 25 0 670 309 21 0 chr17 15763510 15763698 -73740855 - MIR SINE MIR -67 195 4 543 276 19 0 chr17 15764258 15764414 -73740139 - MER63A DNA MER1_type -8 202 44 321 223 75 11 chr17 15764747 15764841 -73739712 + MLT1K LTR MaLR 455 554 -34 209 492 0 0 chr17 15765327 15765449 -73739104 + L2 LINE L2 2844 2965 -349 1230 248 46 39 chr17 15766230 15766662 -73737891 - LTR16A LTR ERVL 0 450 16 243 211 18 35 chr17 15766938 15766995 -73737558 - MER115 DNA AcHobo 0 693 638 396 301 37 0 chr17 15767096 15767232 -73737321 - MER115 DNA AcHobo -437 256 116 2096 98 41 0 chr17 15767289 15767584 -73736969 + AluSx SINE Alu 1 307 -5 1998 121 10 17 chr17 15767624 15767921 -73736632 + AluSg SINE Alu 1 295 -15 2483 259 77 44 chr17 15767977 15768064 -73736489 - L1ME LINE L1 -4880 1200 1117 2399 74 7 3 chr17 15768064 15768374 -73736179 - AluY SINE Alu 0 311 1 2483 259 77 44 chr17 15768374 15769462 -73735091 - L1ME LINE L1 -4963 1117 8 266 240 325 5 chr17 15770286 15770486 -73734067 - LTR33A LTR ERVL -136 387 124 720 226 0 0 chr17 15770659 15770792 -73733761 + FLAM_C SINE Alu 1 133 0 292 216 20 10 chr17 15772044 15772146 -73732407 + GA-rich Low_complexity Low_complexity 2 104 0 2414 76 0 13 chr17 15774009 15774312 -73730241 - AluY SINE Alu -11 300 2 772 308 9 0 chr17 15774524 15774738 -73729815 + MIR SINE MIR 46 261 -1 203 279 59 0 chr17 15774827 15774895 -73729658 + MIR SINE MIR 118 189 -73 2492 65 0 0 chr17 15776421 15776728 -73727825 + AluY SINE Alu 1 307 -4 2215 88 3 3 chr17 15776738 15777044 -73727509 + AluSx SINE Alu 1 306 0 440 314 71 53 chr17 15777048 15777554 -73726999 + L2 LINE L2 2292 2806 -508 2184 115 3 3 chr17 15777599 15777903 -73726650 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 15778060 15778081 -73726472 + AT_rich Low_complexity Low_complexity 1 21 0 251 286 102 62 chr17 15778617 15778705 -73725848 - L1MEd LINE L1 -2965 3164 3081 1549 134 85 19 chr17 15778705 15779012 -73725541 - L1MA4 LINE L1 -6 6294 5968 251 286 102 62 chr17 15779012 15779060 -73725493 - L1MEd LINE L1 -3048 3081 3036 2546 72 0 0 chr17 15779060 15779366 -73725187 - AluY SINE Alu -5 306 1 251 286 102 62 chr17 15779366 15780223 -73724330 - L1MEd LINE L1 -3093 3036 2130 300 345 76 48 chr17 15780519 15781017 -73723536 - L1MEd LINE L1 -5340 779 268 583 336 42 29 chr17 15783550 15783862 -73720691 - MER115 DNA AcHobo -376 317 2 182 357 0 0 chr17 15783896 15783966 -73720587 - L2 LINE L2 0 3313 3244 237 203 0 54 chr17 15783969 15784043 -73720510 - MARNA DNA Mariner -14 572 503 233 254 18 0 chr17 15784126 15784181 -73720372 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 222 310 60 40 chr17 15784185 15784285 -73720268 - MIR3 SINE MIR -39 169 68 2552 33 0 3 chr17 15785313 15785615 -73718938 + L1PA5 LINE L1 5845 6145 -9 220 122 61 0 chr17 15785630 15785679 -73718874 + A-rich Low_complexity Low_complexity 2 53 0 300 325 64 32 chr17 15785955 15786143 -73718410 + L1ME LINE L1 1053 1246 -4959 181 364 0 0 chr17 15786357 15786412 -73718141 - L2 LINE L2 -18 3254 3200 1508 186 0 24 chr17 15786573 15786825 -73717728 + AluJo SINE Alu 28 273 -39 337 256 54 50 chr17 15787206 15787307 -73717246 - MER97c DNA MER1_type? -2 1088 989 2214 122 0 3 chr17 15787307 15787610 -73716943 + AluSx SINE Alu 1 302 -10 337 256 54 50 chr17 15787610 15787766 -73716787 - MER97c DNA MER1_type? -101 989 830 6267 173 36 28 chr17 15787787 15788910 -73715643 + L1MC3 LINE L1 6380 7519 -266 2255 80 3 14 chr17 15788910 15789229 -73715324 - AluSp SINE Alu 0 316 1 6267 173 36 28 chr17 15789229 15789484 -73715069 + L1MC3 LINE L1 7519 7770 -15 583 263 63 5 chr17 15789553 15789743 -73714810 - MER97c DNA MER1_type? -518 572 372 1426 169 27 4 chr17 15789770 15790031 -73714522 - Tigger3(Golem) DNA MER2_type 0 3029 2763 3582 82 8 34 chr17 15790036 15790229 -73714324 + L1PA8 LINE L1 5644 5841 -331 2295 63 3 3 chr17 15790229 15790536 -73714017 - AluY SINE Alu 0 307 1 3582 82 8 34 chr17 15790536 15790876 -73713677 + L1PA8 LINE L1 5841 6164 -8 344 269 156 19 chr17 15790896 15791056 -73713497 + L1ME LINE L1 1823 2004 -4392 281 178 178 44 chr17 15791414 15791594 -73712959 + L1ME LINE L1 2026 2229 -4167 3568 267 33 28 chr17 15791985 15792510 -73712043 + L1ME LINE L1 2387 2908 -3307 2826 16 0 0 chr17 15792510 15792823 -73711730 + AluYb8 SINE Alu 1 313 -5 3568 267 33 28 chr17 15792823 15793648 -73710905 + L1ME LINE L1 2908 3747 -2468 1734 166 0 46 chr17 15793648 15793793 -73710760 + AluJb SINE Alu 1 126 -186 2357 67 0 3 chr17 15793793 15794092 -73710461 + AluY SINE Alu 2 299 -12 1734 166 0 46 chr17 15794092 15794253 -73710300 + AluJb SINE Alu 126 293 -19 3568 267 33 28 chr17 15794253 15794427 -73710126 + L1ME LINE L1 3747 3919 -2296 1622 246 98 12 chr17 15794432 15794810 -73709743 + L1MD2 LINE L1 5733 6176 -183 318 26 0 0 chr17 15794810 15794849 -73709704 + (CA)n Simple_repeat Simple_repeat 2 40 0 1622 246 98 12 chr17 15794849 15795034 -73709519 + L1MD2 LINE L1 6176 6344 -15 370 114 14 0 chr17 15795072 15795142 -73709411 - Charlie4 DNA MER1_type -110 1851 1781 1955 237 60 47 chr17 15795151 15796008 -73708545 + L1ME LINE L1 3916 4783 -1432 1061 254 20 0 chr17 15796009 15796355 -73708198 + L1M4 LINE L1 2583 2935 -3211 380 306 33 25 chr17 15796375 15796496 -73708057 - MIR SINE MIR -113 149 28 934 251 35 0 chr17 15796642 15796845 -73707708 - MIR SINE MIR -51 211 2 23 86 0 0 chr17 15796935 15796993 -73707560 + AT_rich Low_complexity Low_complexity 1 58 0 1661 194 6 20 chr17 15797095 15797440 -73707113 + MER2 DNA MER2_type 6 345 0 2172 112 0 3 chr17 15797895 15798190 -73706363 + AluSc SINE Alu 1 294 -15 226 273 70 0 chr17 15798224 15798352 -73706201 + L1ME LINE L1 5703 5839 -351 1027 157 27 196 chr17 15800849 15801190 -73703363 - MLT1A1 LTR MaLR 0 365 113 2096 88 0 0 chr17 15801190 15801453 -73703100 - AluSc SINE Alu -33 276 14 1027 157 27 196 chr17 15801453 15801550 -73703003 - MLT1A1 LTR MaLR -252 113 1 325 319 149 37 chr17 15801663 15802165 -73702388 - L2 LINE L2 0 3313 2764 2341 113 0 0 chr17 15804442 15804753 -73699800 - AluSx SINE Alu -1 311 1 285 257 79 10 chr17 15804899 15805000 -73699553 + L2 LINE L2 3186 3293 -20 1386 170 166 106 chr17 15805120 15805570 -73698983 + MER39 LTR ERV1 4 561 -146 1011 202 18 9 chr17 15805570 15805788 -73698765 - L1PA16 LINE L1 0 6166 5947 1386 170 166 106 chr17 15805788 15805945 -73698608 + MER39 LTR ERV1 561 707 0 1527 210 0 31 chr17 15807491 15807810 -73696743 + AluJb SINE Alu 1 309 -3 2528 78 0 0 chr17 15807815 15808124 -73696429 + AluY SINE Alu 1 309 -2 2033 129 0 14 chr17 15808133 15808459 -73696094 + AluSq SINE Alu 3 324 0 1336 155 12 85 chr17 15809040 15809234 -73695319 - MER33 DNA MER1_type -2261 324 164 2082 134 0 10 chr17 15809234 15809526 -73695027 + AluSx SINE Alu 1 289 -23 1336 155 12 85 chr17 15809526 15809672 -73694881 - MER33 DNA MER1_type -2421 164 9 628 207 0 57 chr17 15811320 15811460 -73693093 + FLAM_A SINE Alu 2 133 0 23 0 0 0 chr17 15811929 15811952 -73692601 + AT_rich Low_complexity Low_complexity 1 23 0 244 360 43 19 chr17 15811995 15812156 -73692397 - L2 LINE L2 -181 3091 2927 1764 181 55 5 chr17 15812342 15812786 -73691767 - MLT2B1 LTR ERVL 0 515 1 634 323 65 34 chr17 15812925 15813429 -73691124 - L2 LINE L2 -923 2391 1872 1144 103 0 36 chr17 15813478 15813665 -73690888 + AluSg/x SINE Alu 140 312 0 877 224 44 19 chr17 15813809 15814014 -73690539 + MER63A DNA MER1_type 1 210 0 196 306 45 27 chr17 15814368 15814479 -73690074 + L2 LINE L2 3199 3311 -2 2510 67 0 3 chr17 15814617 15814917 -73689636 + AluY SINE Alu 1 299 -12 314 262 131 91 chr17 15815914 15816311 -73688242 - MLT1K LTR MaLR -1 587 175 282 329 21 0 chr17 15816406 15816546 -73688007 - MIR SINE MIR -33 229 87 1987 226 110 17 chr17 15816568 15816992 -73687561 + LTR48B LTR ERV1 1 497 -147 4190 108 8 26 chr17 15816992 15817260 -73687293 - MER4A LTR ERV1 0 600 329 2136 101 3 58 chr17 15817260 15817587 -73686966 - AluSc SINE Alu 0 309 1 4190 108 8 26 chr17 15817587 15817929 -73686624 - MER4A LTR ERV1 -271 329 1 1987 226 110 17 chr17 15817929 15818093 -73686460 + LTR48B LTR ERV1 497 644 0 25 51 0 0 chr17 15818627 15818666 -73685887 + AT_rich Low_complexity Low_complexity 1 39 0 670 208 29 20 chr17 15820641 15820827 -73683726 - MER5A DNA MER1_type -1 177 1 300 250 52 52 chr17 15820831 15820947 -73683606 + MER5B DNA MER1_type 2 117 -61 2212 108 14 7 chr17 15821455 15821752 -73682801 - AluSx SINE Alu -13 299 1 509 286 105 64 chr17 15822063 15823534 -73681019 + L1P5 LINE L1 3913 5456 -700 249 139 0 0 chr17 15823570 15823613 -73680940 + (ATG)n Simple_repeat Simple_repeat 3 45 0 410 234 11 0 chr17 15823659 15823753 -73680800 - MIR SINE MIR -46 216 122 619 224 92 6 chr17 15823754 15823928 -73680625 + MER112 DNA MER1_type 71 259 -1 533 236 242 53 chr17 15824845 15825184 -73679369 + MLT1I LTR MaLR 5 407 -2 740 202 31 103 chr17 15825769 15825873 -73678680 - MER63A DNA MER1_type -1481 207 126 1559 194 27 3 chr17 15825873 15826166 -73678387 - AluJo SINE Alu -12 300 1 740 202 31 103 chr17 15826166 15826284 -73678269 - MER63A DNA MER1_type -1562 126 1 203 292 22 56 chr17 15826492 15826581 -73677972 - L2 LINE L2 -50 3263 3178 696 280 95 85 chr17 15826732 15827194 -73677359 + MLT1K LTR MaLR 66 535 -53 1331 99 103 24 chr17 15827194 15827315 -73677238 + MER30 DNA MER1_type 1 111 -119 234 0 0 0 chr17 15827315 15827341 -73677212 + (TA)n Simple_repeat Simple_repeat 2 27 0 1331 99 103 24 chr17 15827341 15827432 -73677121 + MER30 DNA MER1_type 111 230 0 696 280 95 85 chr17 15827432 15827487 -73677066 + MLT1K LTR MaLR 535 588 0 226 302 42 10 chr17 15828952 15829048 -73675505 - L1MC4 LINE L1 -1327 6715 6617 195 42 0 0 chr17 15829048 15829072 -73675481 + (TG)n Simple_repeat Simple_repeat 2 25 0 231 219 164 52 chr17 15829292 15829410 -73675143 + MIR SINE MIR 22 146 -62 281 270 126 6 chr17 15830203 15830362 -73674191 - MIR SINE MIR -24 238 61 198 307 164 0 chr17 15830511 15830651 -73673902 - MIR SINE MIR -21 241 79 2407 90 0 10 chr17 15830862 15831174 -73673379 + AluSg SINE Alu 1 309 -1 377 167 26 0 chr17 15832071 15832149 -73672404 - MER116 DNA Mariner 0 80 1 349 270 36 105 chr17 15832510 15832758 -73671795 + L2 LINE L2 2233 2463 -851 327 145 66 13 chr17 15834602 15834678 -73669875 - MER116 DNA Mariner 0 80 1 350 54 36 0 chr17 15835841 15835897 -73668656 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2214 120 0 10 chr17 15836073 15836381 -73668172 + AluSx SINE Alu 1 305 -7 2049 141 3 7 chr17 15836899 15837205 -73667348 - AluSx SINE Alu -7 305 1 736 277 96 38 chr17 15837270 15837717 -73666836 + LTR16C LTR ERVL 19 491 0 376 226 60 0 chr17 15838401 15838534 -73666019 + L1ME4a LINE L1 5965 6105 -16 334 305 52 46 chr17 15838609 15838783 -73665770 - L2 LINE L2 -36 3277 3103 1592 183 16 65 chr17 15838825 15839197 -73665356 - MLT1A1 LTR MaLR -8 357 4 2298 109 6 3 chr17 15840544 15840856 -73663697 + AluSq SINE Alu 1 313 0 2553 48 13 10 chr17 15841003 15841188 -73663365 - AluY SINE Alu 0 311 123 315 0 0 0 chr17 15841188 15841223 -73663330 + (TG)n Simple_repeat Simple_repeat 2 36 0 2553 48 13 10 chr17 15841223 15841347 -73663206 - AluY SINE Alu -188 123 1 544 241 56 12 chr17 15841535 15841697 -73662856 + L1ME1 LINE L1 5994 6162 -4 370 241 0 68 chr17 15842600 15842791 -73661762 + C-rich Low_complexity Low_complexity 2 179 0 740 287 75 47 chr17 15842927 15843091 -73661462 - LTR33 LTR ERVL -2 519 361 997 156 21 11 chr17 15843091 15843277 -73661276 + MER53 DNA DNA 1 188 -1 740 287 75 47 chr17 15843277 15843603 -73660950 - LTR33 LTR ERVL -160 361 15 2416 67 0 3 chr17 15844042 15844339 -73660214 + AluY SINE Alu 3 298 -13 200 95 0 71 chr17 15844595 15844637 -73659916 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 2453 82 0 0 chr17 15845047 15845351 -73659202 + AluSg SINE Alu 1 304 -6 1552 189 102 23 chr17 15847563 15847917 -73656636 + MLT1B LTR MaLR 1 382 -8 1544 211 50 21 chr17 15847972 15848309 -73656244 - MLT1C LTR MaLR -9 458 112 298 164 33 0 chr17 15848313 15848374 -73656179 - L1MA9 LINE L1 -10 6302 6240 2081 124 7 0 chr17 15848383 15848703 -73655850 - AluSp SINE Alu 0 322 1 414 163 35 12 chr17 15848747 15848828 -73655725 - MLT1C LTR MaLR -343 124 42 2259 177 71 8 chr17 15848828 15849303 -73655250 + LTR27 LTR ERV1 3 574 -149 227 299 0 15 chr17 15849368 15849435 -73655118 + LTR28 LTR ERV1 954 1019 -1 279 0 0 0 chr17 15850577 15850608 -73653945 + (TG)n Simple_repeat Simple_repeat 1 31 0 213 94 0 0 chr17 15851544 15851576 -73652977 + (CAT)n Simple_repeat Simple_repeat 2 33 0 286 265 62 62 chr17 15851761 15851972 -73652581 + L1MC4a LINE L1 5719 5929 -1879 813 158 8 0 chr17 15852435 15852562 -73651991 + FLAM_A SINE Alu 1 128 -5 540 231 20 27 chr17 15853344 15853491 -73651062 + MER103 DNA DNA 1 146 -20 464 194 29 0 chr17 15853778 15853881 -73650672 + MER5A DNA MER1_type 7 112 -77 478 206 219 19 chr17 15857629 15857784 -73646769 + MER5A DNA MER1_type 4 189 0 3716 204 95 51 chr17 15857945 15858310 -73646243 + L1MD2 LINE L1 5079 5426 -933 2509 38 0 0 chr17 15858310 15858600 -73645953 + AluY SINE Alu 1 290 -21 3716 204 95 51 chr17 15858600 15858613 -73645940 + L1MD2 LINE L1 5426 5437 -922 2116 165 94 13 chr17 15858613 15859007 -73645546 + MSTB LTR MaLR 1 426 0 3716 204 95 51 chr17 15859007 15859848 -73644705 + L1MD2 LINE L1 5437 6346 -13 467 241 28 88 chr17 15859905 15860121 -73644432 + MER63A DNA MER1_type 8 210 0 209 271 47 156 chr17 15860139 15860197 -73644356 + MER5A DNA MER1_type 18 81 -108 2499 60 0 0 chr17 15860197 15860498 -73644055 + AluSc SINE Alu 1 301 -8 209 271 47 156 chr17 15860498 15860509 -73644044 + MER5A DNA MER1_type 81 92 -97 2109 88 70 0 chr17 15860509 15860793 -73643760 + AluSg SINE Alu 1 304 -6 209 271 47 156 chr17 15860793 15860914 -73643639 + MER5A DNA MER1_type 92 188 -1 865 200 28 39 chr17 15861300 15861480 -73643073 - MER5B DNA MER1_type 0 178 1 207 250 36 0 chr17 15861772 15861856 -73642697 + (TA)n Simple_repeat Simple_repeat 1 87 0 192 274 20 0 chr17 15863813 15863864 -73640689 - MIR3 SINE MIR -52 156 105 303 28 0 0 chr17 15864265 15864301 -73640252 + (A)n Simple_repeat Simple_repeat 1 36 0 183 295 90 57 chr17 15864356 15864478 -73640075 + MIR3 SINE MIR 67 192 -16 782 226 62 35 chr17 15864653 15864879 -73639674 - MER41E LTR ERV1 0 512 281 1320 172 85 108 chr17 15864900 15865403 -73639150 + MER66A LTR ERV1 99 478 0 861 270 0 14 chr17 15865403 15865593 -73638960 - MER41E LTR ERV1 -231 281 95 2115 123 47 37 chr17 15865913 15866466 -73638087 - MER51A LTR ERV1 -2 632 1 221 271 0 0 chr17 15866511 15866581 -73637972 + C-rich Low_complexity Low_complexity 1 70 0 1213 173 126 73 chr17 15866696 15867077 -73637476 + MER57A LTR ERV1 3 403 0 27 49 0 0 chr17 15867615 15867656 -73636897 + AT_rich Low_complexity Low_complexity 1 41 0 258 116 0 0 chr17 15868029 15868072 -73636481 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 389 255 18 44 chr17 15869606 15869743 -73634810 + MIR3 SINE MIR 56 193 -15 253 273 0 0 chr17 15870359 15870414 -73634139 + (TG)n Simple_repeat Simple_repeat 2 56 0 308 259 25 25 chr17 15871880 15871961 -73632592 + LTR67 LTR ERVL 92 172 -385 * 674 240 53 104 chr17 15871904 15872348 -73632205 + MLT1L LTR MaLR 110 614 -1 258 291 150 0 chr17 15872558 15872685 -73631868 + MIR SINE MIR 117 262 0 339 319 63 42 chr17 15873030 15873315 -73631238 - HAL1b LINE L1 -532 816 526 1616 248 116 60 chr17 15873335 15873851 -73630702 - L2 LINE L2 -443 2871 2310 493 175 0 0 chr17 15873851 15873931 -73630622 + MADE1 DNA Mariner 1 80 0 1616 248 116 60 chr17 15873931 15874060 -73630493 - L2 LINE L2 -1004 2310 2190 2623 42 0 10 chr17 15875581 15875892 -73628661 + AluY SINE Alu 1 308 -3 2267 112 0 0 chr17 15876885 15877189 -73627364 - AluY SINE Alu -7 304 1 1109 122 59 115 chr17 15877461 15877616 -73626937 + L1MA9 LINE L1 5958 6091 -221 2575 55 3 0 chr17 15877616 15877924 -73626629 + AluY SINE Alu 1 309 -2 1109 122 59 115 chr17 15877924 15878054 -73626499 + L1MA9 LINE L1 6091 6227 -85 2478 154 31 3 chr17 15878055 15878445 -73626108 + MER57A LTR ERV1 3 403 0 5284 138 10 9 chr17 15878460 15879250 -73625303 + MER57A-int LTR ERV1 16 806 -6731 2015 110 4 0 chr17 15879243 15879507 -73625046 + MER57A-int LTR ERV1 361 625 -5321 * 5121 138 42 10 chr17 15879496 15880329 -73624224 + MER57A-int LTR ERV1 1081 1940 -4006 * 20606 79 11 5 chr17 15880322 15883013 -73621540 + MER57A-int LTR ERV1 4411 7118 -419 660 142 50 8 chr17 15883025 15883145 -73621408 + LTR54B LTR ERV1 5 129 -369 1816 97 4 37 chr17 15883147 15883416 -73621137 + MER57A-int LTR ERV1 7278 7537 0 2491 162 18 0 chr17 15883416 15883812 -73620741 + MER57A LTR ERV1 1 403 0 1970 252 69 28 chr17 15884849 15885353 -73619200 + MER21B LTR ERV1 2 526 -337 1031 318 87 20 chr17 15885508 15886141 -73618412 + L2 LINE L2 1686 2360 -954 356 252 15 59 chr17 15886146 15886281 -73618272 - LTR33 LTR ERVL 0 521 393 * 635 264 121 0 chr17 15886278 15886460 -73618093 - LTR33 LTR ERVL -315 206 3 2467 145 35 40 chr17 15886467 15886895 -73617658 - MSTB LTR MaLR 0 426 1 367 328 16 16 chr17 15887175 15887297 -73617256 + L2 LINE L2 3139 3260 -12 368 309 39 55 chr17 15888239 15888420 -73616133 - MIR SINE MIR -64 198 21 395 19 19 0 chr17 15888931 15888983 -73615570 + (CA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr17 15889254 15889275 -73615278 + AT_rich Low_complexity Low_complexity 1 21 0 270 274 48 12 chr17 15889301 15889385 -73615168 - MIR SINE MIR -117 145 59 409 284 28 0 chr17 15889689 15889798 -73614755 - L2 LINE L2 -8 3305 3194 1660 232 213 89 chr17 15889806 15890388 -73614165 - MLT1E2 LTR MaLR 0 626 1 610 350 150 20 chr17 15890467 15890752 -73613801 - L2 LINE L2 -296 3017 2771 2133 125 0 0 chr17 15890752 15891041 -73613512 - AluSg1 SINE Alu -20 289 1 610 350 150 20 chr17 15891041 15891241 -73613312 - L2 LINE L2 -542 2771 2496 411 327 60 44 chr17 15892068 15892683 -73611870 - L1M4 LINE L1 -2598 3548 2914 2611 26 3 13 chr17 15892683 15892987 -73611566 + AluY SINE Alu 1 301 -10 411 327 60 44 chr17 15892987 15893220 -73611333 - L1M4 LINE L1 -3232 2914 2686 310 269 50 28 chr17 15893541 15893682 -73610871 + L1MC/D LINE L1 4903 5046 -1100 3368 134 81 10 chr17 15893997 15894489 -73610064 - MER1A DNA MER1_type 0 527 1 796 319 57 24 chr17 15895137 15895677 -73608876 + L1MC/D LINE L1 5272 5829 -302 6074 115 13 9 chr17 15895763 15896704 -73607849 + L1PA14 LINE L1 5209 6161 0 2359 98 0 0 chr17 15897204 15897499 -73607054 + AluSx SINE Alu 1 295 -17 309 318 184 21 chr17 15897999 15898110 -73606443 + L1ME LINE L1 5391 5483 -638 703 160 38 46 chr17 15898110 15898241 -73606312 + FLAM_A SINE Alu 4 133 0 309 318 184 21 chr17 15898241 15898362 -73606191 + L1ME LINE L1 5483 5661 -460 21 0 0 0 chr17 15898420 15898441 -73606112 + AT_rich Low_complexity Low_complexity 1 21 0 1783 55 0 18 chr17 15898591 15898966 -73605587 + AluY SINE Alu 70 440 0 23 0 0 0 chr17 15899383 15899406 -73605147 + AT_rich Low_complexity Low_complexity 1 23 0 323 290 143 36 chr17 15899498 15899750 -73604803 - L1M4 LINE L1 -1550 4596 4318 198 0 0 0 chr17 15899856 15899878 -73604675 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1904 97 3 80 chr17 15899878 15900178 -73604375 - AluSc SINE Alu -32 277 1 374 345 31 63 chr17 15900294 15900613 -73603940 - L1M4 LINE L1 -2244 3902 3594 403 297 36 0 chr17 15900869 15901007 -73603546 + L1ME4a LINE L1 5974 6116 -5 202 225 0 0 chr17 15902086 15902126 -73602427 + CT-rich Low_complexity Low_complexity 1 40 0 381 252 26 73 chr17 15902411 15902562 -73601991 - MIR SINE MIR -55 207 64 229 342 26 9 chr17 15902573 15902687 -73601866 + L2 LINE L2 3148 3263 -9 180 281 101 73 chr17 15902831 15902991 -73601562 + L2 LINE L2 3130 3297 -16 2186 93 0 7 chr17 15902991 15903281 -73601272 + AluSq SINE Alu 1 288 -25 180 281 101 73 chr17 15903281 15903298 -73601255 + L2 LINE L2 3297 3312 -1 2349 64 3 10 chr17 15903404 15903701 -73600852 + AluSg SINE Alu 1 295 -15 251 266 133 58 chr17 15904065 15904253 -73600300 - MIR3 SINE MIR -4 204 3 482 273 84 26 chr17 15905326 15905480 -73599073 - MLT1L LTR MaLR -43 572 410 417 223 36 18 chr17 15905517 15905629 -73598924 - MLT1L LTR MaLR -298 317 204 274 191 48 16 chr17 15905602 15905665 -73598888 - MLT1J LTR MaLR -344 167 103 * 189 171 0 0 chr17 15905900 15905935 -73598618 + (CA)n Simple_repeat Simple_repeat 2 36 0 241 133 0 0 chr17 15905939 15905984 -73598569 - L1MC4 LINE L1 -1339 6703 6659 564 174 11 49 chr17 15906012 15906196 -73598357 + (CATATA)n Simple_repeat Simple_repeat 1 177 0 406 344 31 0 chr17 15906207 15906335 -73598218 - L2 LINE L2 0 3313 3182 211 233 0 0 chr17 15907589 15907632 -73596921 + MIR SINE MIR 88 130 -132 2434 59 0 23 chr17 15907632 15907998 -73596555 - AluY SINE Alu 0 359 1 204 293 61 30 chr17 15908749 15908848 -73595705 + L2 LINE L2 3150 3251 -62 215 169 0 68 chr17 15909110 15909169 -73595384 + A-rich Low_complexity Low_complexity 3 57 0 527 281 106 21 chr17 15909199 15909626 -73594927 + L1MC/D LINE L1 5265 5723 -689 1821 125 0 55 chr17 15909786 15910075 -73594478 + AluSx SINE Alu 39 311 -1 721 232 0 30 chr17 15910663 15910827 -73593726 + MER63A DNA MER1_type 24 182 -28 914 252 72 65 chr17 15910982 15911522 -73593031 + MER39 LTR ERV1 6 707 0 1859 174 0 7 chr17 15911683 15911988 -73592565 + AluJb SINE Alu 1 303 -9 189 0 0 0 chr17 15912808 15912829 -73591724 + (A)n Simple_repeat Simple_repeat 1 21 0 202 330 9 28 chr17 15913450 15913559 -73590994 + MIR SINE MIR 33 139 -123 2424 53 9 40 chr17 15913623 15913944 -73590609 - AluY SINE Alu 0 311 1 2729 140 37 18 chr17 15914543 15915000 -73589553 + LTR39 LTR ERV1 3 468 -315 446 169 0 36 chr17 15915002 15915085 -73589468 + LTR39 LTR ERV1 704 783 0 192 40 0 0 chr17 15915104 15915129 -73589424 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1056 197 106 8 chr17 15915352 15915489 -73589064 - L1MA9 LINE L1 -3 6309 6187 339 78 0 0 chr17 15915489 15915540 -73589013 + (TG)n Simple_repeat Simple_repeat 2 52 0 1056 197 106 8 chr17 15915540 15915666 -73588887 - L1MA9 LINE L1 -125 6187 6020 2906 145 18 35 chr17 15915973 15916260 -73588293 + MER31A LTR ERV1 1 278 -207 2340 58 41 3 chr17 15916260 15916552 -73588001 - AluY SINE Alu -8 303 1 2906 145 18 35 chr17 15916552 15916753 -73587800 + MER31A LTR ERV1 278 481 -4 1664 183 31 9 chr17 15917194 15917511 -73587042 + L1MA3 LINE L1 5978 6301 -4 21 0 0 0 chr17 15917575 15917596 -73586957 + AT_rich Low_complexity Low_complexity 1 21 0 262 211 0 0 chr17 15918027 15918079 -73586474 + MER72 LTR ERV1 410 461 -261 542 192 103 51 chr17 15918121 15918335 -73586218 + LTR45B LTR ERV1 264 488 -1 622 267 41 23 chr17 15918344 15918516 -73586037 + LTR33 LTR ERVL 101 275 -246 268 208 0 0 chr17 15918622 15918675 -73585878 + LTR33 LTR ERVL 469 521 0 844 336 59 29 chr17 15919122 15919569 -73584984 + LTR67 LTR ERVL 9 476 -81 2010 191 18 25 chr17 15919569 15919962 -73584591 + MLT1B LTR MaLR 1 390 0 844 336 59 29 chr17 15919962 15920041 -73584512 + LTR67 LTR ERVL 476 551 -6 2488 253 48 59 chr17 15920069 15920453 -73584100 + L1ME LINE L1 6 393 -5677 2418 81 0 7 chr17 15920453 15920763 -73583790 + AluY SINE Alu 1 308 -3 2488 253 48 59 chr17 15920763 15921274 -73583279 + L1ME LINE L1 393 891 -5179 2418 87 3 3 chr17 15921395 15921704 -73582849 + AluSg1 SINE Alu 1 309 0 932 118 0 37 chr17 15923841 15923924 -73580629 - FLAM_C SINE Alu -181 131 53 4845 138 35 17 chr17 15923924 15924695 -73579858 - LTR1 LTR ERV1 0 785 1 932 118 0 37 chr17 15924695 15924747 -73579806 - FLAM_C SINE Alu -259 53 1 611 262 89 76 chr17 15924938 15925400 -73579153 + MLT1K LTR MaLR 5 472 -4 310 283 11 11 chr17 15925592 15925684 -73578869 - MIR SINE MIR -6 256 165 219 211 88 0 chr17 15925687 15925744 -73578809 - MIR SINE MIR -75 187 126 189 225 0 0 chr17 15926835 15926875 -73577678 + L2 LINE L2 3274 3313 0 210 71 0 0 chr17 15926905 15926933 -73577620 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 305 95 49 chr17 15928319 15928573 -73575980 - L2 LINE L2 -1 3312 3071 2142 135 0 0 chr17 15928573 15928870 -73575683 + AluSq SINE Alu 1 297 -16 891 305 95 49 chr17 15928870 15929124 -73575429 - L2 LINE L2 -242 3071 2779 189 246 29 58 chr17 15929275 15929344 -73575209 - MIR3 SINE MIR -11 197 131 2444 148 43 45 chr17 15929444 15929890 -73574663 + MER65A LTR ERV1 1 445 0 323 121 24 24 chr17 15929941 15930024 -73574529 + CT-rich Low_complexity Low_complexity 1 83 0 664 146 15 44 chr17 15930165 15930302 -73574251 + MLT1E3 LTR MaLR 72 204 -420 260 244 13 51 chr17 15930433 15930511 -73574042 + MLT2C1 LTR ERVL 269 343 -54 1968 242 17 13 chr17 15930519 15931048 -73573505 + L1ME1 LINE L1 3736 4266 -1880 11085 207 22 39 chr17 15931063 15934465 -73570088 + L1PA10 LINE L1 10 3358 -3103 6526 51 1 0 chr17 15935801 15936584 -73567969 - L1PA6 LINE L1 0 6154 5371 228 135 0 0 chr17 15936551 15936588 -73567965 - L1M4 LINE L1 -743 5403 5367 * 7162 114 7 4 chr17 15936759 15939819 -73564734 + L1PA10 LINE L1 3340 6483 0 1900 250 26 30 chr17 15939820 15940130 -73564423 + L1ME1 LINE L1 4261 4570 -1576 2391 78 0 0 chr17 15940130 15940423 -73564130 - AluY SINE Alu -18 293 1 1900 250 26 30 chr17 15940423 15940688 -73563865 + L1ME1 LINE L1 4570 4834 -1312 757 41 31 0 chr17 15940693 15940790 -73563763 + L1P4 LINE L1 5385 5484 -684 2175 198 69 27 chr17 15940792 15941745 -73562808 + L1ME1 LINE L1 4842 5842 -324 569 200 44 37 chr17 15941809 15941944 -73562609 - MER3 DNA MER1_type -86 123 35 22 35 0 0 chr17 15943823 15943852 -73560701 + AT_rich Low_complexity Low_complexity 1 29 0 1516 231 114 33 chr17 15943852 15944371 -73560182 - LTR48B LTR ERV1 0 644 84 299 109 47 62 chr17 15944357 15944421 -73560132 - LTR29 LTR ERV1 -423 199 137 * 2477 74 3 0 chr17 15944870 15945179 -73559374 - AluSp SINE Alu -3 310 1 239 202 326 0 chr17 15945490 15945579 -73558974 - MIR SINE MIR 0 262 145 2344 94 7 0 chr17 15945704 15946003 -73558550 - AluSg SINE Alu -7 303 3 507 33 0 0 chr17 15947384 15947445 -73557108 + (GA)n Simple_repeat Simple_repeat 2 62 0 414 0 0 0 chr17 15947743 15947789 -73556764 + (CA)n Simple_repeat Simple_repeat 2 47 0 761 265 38 74 chr17 15948162 15948500 -73556053 - L1ME4a LINE L1 -198 5923 5599 2279 81 11 0 chr17 15948500 15948783 -73555770 - AluSx SINE Alu -15 297 12 761 265 38 74 chr17 15948783 15948836 -73555717 - L1ME4a LINE L1 -522 5599 5546 828 153 0 0 chr17 15949072 15949190 -73555363 - FLAM_C SINE Alu -15 118 1 271 318 112 16 chr17 15949266 15949508 -73555045 + HAL1 LINE L1 1454 1718 -789 497 246 103 10 chr17 15949670 15949840 -73554713 + MER39 LTR ERV1 1 187 -355 * 1990 143 36 15 chr17 15949808 15950143 -73554410 + MER39 LTR ERV1 361 702 -5 1626 206 0 31 chr17 15950180 15950501 -73554052 - AluJo SINE Alu -1 311 1 2135 105 3 3 chr17 15950760 15951054 -73553499 + AluSc SINE Alu 5 298 -11 305 278 52 63 chr17 15951054 15951306 -73553247 + L1M4 LINE L1 2275 2523 -3623 * 576 326 97 59 chr17 15951303 15951893 -73552660 + L1M4 LINE L1 3085 3716 -2430 2432 65 0 10 chr17 15951893 15952202 -73552351 + AluY SINE Alu 1 306 -5 576 326 97 59 chr17 15952202 15952429 -73552124 + L1M4 LINE L1 3716 3933 -2213 2167 113 0 13 chr17 15952745 15953046 -73551507 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr17 15954064 15954085 -73550468 + AT_rich Low_complexity Low_complexity 1 21 0 2676 45 0 3 chr17 15954115 15954424 -73550129 - AluY SINE Alu -3 308 1 541 133 0 0 chr17 15954505 15954595 -73549958 - L1MB8 LINE L1 0 6178 6089 7017 62 11 9 chr17 15954596 15956227 -73548326 - L1PA7 LINE L1 0 6154 4521 * 9034 101 14 5 chr17 15956210 15957428 -73547125 - L1P3 LINE L1 -5228 1233 5 6325 235 49 37 chr17 15957432 15960180 -73544373 - L1MB7 LINE L1 -83 6101 3292 512 275 46 85 chr17 15960373 15960762 -73543791 + L1MC4 LINE L1 5552 5925 -1883 456 227 146 11 chr17 15961283 15961444 -73543109 + MER5A DNA MER1_type 4 189 0 188 277 46 31 chr17 15961460 15961525 -73543028 - MER5B DNA MER1_type -9 169 104 400 290 78 33 chr17 15961664 15961909 -73542644 - MIR SINE MIR -2 260 5 205 262 0 0 chr17 15962359 15962401 -73542152 + MIR3 SINE MIR 143 184 -24 184 29 29 29 chr17 15963433 15963467 -73541086 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 238 337 32 32 chr17 15966486 15966581 -73537972 - L2 LINE L2 -9 3304 3210 432 330 112 28 chr17 15966802 15967123 -73537430 - L2 LINE L2 -552 2762 2415 1571 174 3 29 chr17 15967676 15967986 -73536567 - AluJo SINE Alu -10 302 1 224 245 21 75 chr17 15968170 15968264 -73536289 - L2 LINE L2 0 3313 3225 416 240 129 88 chr17 15968507 15968609 -73535944 + MER5B DNA MER1_type 1 114 -64 2104 101 6 28 chr17 15968609 15968926 -73535627 - AluSx SINE Alu -2 310 1 416 240 129 88 chr17 15968926 15968994 -73535559 + MER5B DNA MER1_type 114 178 0 238 251 43 12 chr17 15970540 15970635 -73533918 + MIR3 SINE MIR 61 162 -46 441 172 35 0 chr17 15970653 15970740 -73533813 - U13 snRNA snRNA -2 102 13 198 191 0 0 chr17 15972685 15972732 -73531821 + (TA)n Simple_repeat Simple_repeat 2 48 0 315 255 0 71 chr17 15972750 15972848 -73531705 + L1MC4 LINE L1 6613 6703 -1339 189 0 0 0 chr17 15973272 15973293 -73531260 + (T)n Simple_repeat Simple_repeat 1 21 0 278 237 17 0 chr17 15973874 15973933 -73530620 - L3 LINE CR1 -14 1563 1504 242 337 0 35 chr17 15974661 15974747 -73529806 - L2 LINE L2 -5 3308 3226 341 309 92 28 chr17 15974798 15974870 -73529683 + L1MC/D LINE L1 2132 2198 -3948 1771 125 7 7 chr17 15974870 15975142 -73529411 + AluSx SINE Alu 35 306 -6 341 309 92 28 chr17 15975142 15975286 -73529267 + L1MC/D LINE L1 2198 2362 -3784 253 291 114 34 chr17 15975393 15976105 -73528448 + L1MC/D LINE L1 2443 3211 -2935 305 302 0 0 chr17 15976157 15976263 -73528290 + L1MC/D LINE L1 4504 4609 -1537 255 191 17 69 chr17 15976507 15976680 -73527873 + (TATAA)n Simple_repeat Simple_repeat 1 164 0 369 344 119 9 chr17 15976712 15976939 -73527614 + L1MC/D LINE L1 4741 4992 -1154 314 274 27 45 chr17 15976946 15977142 -73527411 + L1MC/D LINE L1 5293 5494 -668 26 0 0 0 chr17 15977186 15977212 -73527341 + AT_rich Low_complexity Low_complexity 1 26 0 270 186 17 0 chr17 15977246 15977305 -73527248 - MADE1 DNA Mariner 0 80 21 279 197 54 35 chr17 15977427 15977543 -73527010 + L1MC/D LINE L1 5768 5892 -287 2271 41 6 47 chr17 15978592 15978912 -73525641 + AluY SINE Alu 1 307 -4 803 210 39 100 chr17 15979058 15979287 -73525266 - MER58A DNA MER1_type -9 215 1 2250 94 3 0 chr17 15979656 15979954 -73524599 + AluSc SINE Alu 1 299 -10 2373 60 7 0 chr17 15979954 15980255 -73524298 + AluY SINE Alu 1 303 -8 180 0 0 0 chr17 15981705 15981725 -73522828 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 2393 48 0 10 chr17 15982789 15983084 -73521469 - AluY SINE Alu -19 292 1 998 266 95 105 chr17 15983108 15984340 -73520213 + L2 LINE L2 2035 3313 0 341 272 139 51 chr17 15984343 15984501 -73520052 + L3 LINE CR1 1382 1553 -24 375 23 0 0 chr17 15985257 15985301 -73519252 + (CTG)n Simple_repeat Simple_repeat 1 44 0 333 269 92 15 chr17 15986186 15986316 -73518237 - L1ME4a LINE L1 -1 6120 5981 525 304 293 0 chr17 15986512 15986871 -73517682 + L2 LINE L2 2848 3311 -2 698 347 113 21 chr17 15986948 15987542 -73517011 - L2 LINE L2 -452 2862 2201 2204 80 0 3 chr17 15987542 15987828 -73516725 + AluSp SINE Alu 1 285 -28 698 347 113 21 chr17 15987828 15987885 -73516668 - L2 LINE L2 -1113 2201 2151 842 293 20 33 chr17 15988221 15988525 -73516028 + MLT1J LTR MaLR 205 504 -7 1781 84 8 0 chr17 15989232 15989470 -73515083 + AluSq SINE Alu 6 245 -68 204 214 24 0 chr17 15992090 15992132 -73512421 + GA-rich Low_complexity Low_complexity 4 46 0 2014 81 39 36 chr17 15992526 15992835 -73511718 + AluSg SINE Alu 1 310 0 211 211 19 0 chr17 15995507 15995559 -73508994 + GA-rich Low_complexity Low_complexity 1 53 0 210 143 0 0 chr17 15996436 15996471 -73508082 + (CA)n Simple_repeat Simple_repeat 1 35 0 196 171 57 0 chr17 15996684 15996719 -73507834 - L2 LINE L2 -18 3254 3218 611 295 84 9 chr17 15996749 15996976 -73507577 + MIR SINE MIR 2 245 -17 398 81 32 0 chr17 15997075 15997137 -73507416 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 192 215 76 63 chr17 15997284 15997363 -73507190 - MIR SINE MIR -5 257 178 319 148 33 16 chr17 15997398 15997459 -73507094 - L1ME3A LINE L1 -5 6165 6104 264 285 42 56 chr17 15999333 15999477 -73505076 - MER5B DNA MER1_type -26 152 11 354 123 0 0 chr17 15999607 15999664 -73504889 + (TG)n Simple_repeat Simple_repeat 1 57 0 916 252 28 24 chr17 16000521 16000771 -73503782 - MIR SINE MIR -1 261 11 341 321 23 38 chr17 16001243 16001374 -73503179 - MIR SINE MIR -64 144 16 526 190 18 18 chr17 16001675 16001838 -73502715 + GA-rich Low_complexity Low_complexity 1 163 0 491 278 24 47 chr17 16002965 16003220 -73501333 + L1ME4a LINE L1 5617 5865 -256 322 285 87 14 chr17 16003243 16003422 -73501131 - MIR SINE MIR -13 249 12 205 225 12 12 chr17 16004156 16004236 -73500317 + CT-rich Low_complexity Low_complexity 3 82 0 254 290 21 11 chr17 16004429 16004522 -73500031 + MER103 DNA DNA 73 166 0 1906 211 55 45 chr17 16004956 16005487 -73499066 + LTR55 LTR ERV 3 538 -10 200 244 0 0 chr17 16006277 16006318 -73498235 - L2 LINE L2 -4 3309 3269 840 240 81 51 chr17 16006357 16006845 -73497708 + MLT1H LTR MaLR 15 549 0 258 224 15 0 chr17 16007199 16007266 -73497287 - MER5C DNA MER1_type -1 323 256 355 235 34 42 chr17 16007342 16007461 -73497092 - MER5C DNA MER1_type -202 122 5 2214 130 22 33 chr17 16007632 16008000 -73496553 - THE1B LTR MaLR 0 364 1 28 0 0 0 chr17 16008146 16008174 -73496379 + AT_rich Low_complexity Low_complexity 1 28 0 3630 55 0 0 chr17 16008323 16008760 -73495793 - L1PA5 LINE L1 -8 6146 5710 2208 95 0 14 chr17 16009874 16010195 -73494358 - AluSx SINE Alu 0 312 1 1314 194 89 31 chr17 16010536 16010861 -73493692 - MER2 DNA MER2_type 0 344 1 180 283 0 0 chr17 16010875 16010921 -73493632 - MIR SINE MIR -139 123 78 534 267 6 72 chr17 16011286 16011525 -73493028 + LTR16A1 LTR ERVL 251 457 0 537 309 49 45 chr17 16011795 16012018 -73492535 + Charlie8 DNA MER1_type 4 227 -2190 542 258 74 46 chr17 16012031 16012364 -73492189 - MLT1J2 LTR MaLR 0 450 70 1080 212 51 10 chr17 16013246 16013557 -73490996 - MER33 DNA MER1_type -5 319 1 324 313 6 62 chr17 16013759 16013938 -73490615 - LTR16C LTR ERVL 0 491 323 843 210 0 0 chr17 16013990 16014152 -73490401 - L1MEc LINE L1 -5585 811 650 435 262 65 0 chr17 16014253 16014360 -73490193 - LTR16C LTR ERVL -258 233 120 241 256 0 39 chr17 16014531 16014609 -73489944 - L1MA10 LINE L1 -2 6332 6258 * 4185 242 93 27 chr17 16014599 16014755 -73489798 - L1MEc LINE L1 -4738 1658 1514 827 233 23 6 chr17 16014755 16014927 -73489626 - MER45A DNA AcHobo -3 175 1 4185 242 93 27 chr17 16014927 16015184 -73489369 - L1MEc LINE L1 -4882 1514 1275 351 0 0 0 chr17 16015184 16015223 -73489330 + (CA)n Simple_repeat Simple_repeat 2 40 0 4185 242 93 27 chr17 16015223 16015259 -73489294 - L1MEc LINE L1 -5121 1275 1243 1873 151 41 0 chr17 16015259 16015551 -73489002 - AluSx SINE Alu -8 304 1 4185 242 93 27 chr17 16015551 16016282 -73488271 - L1MEc LINE L1 -5153 1243 351 180 0 0 0 chr17 16016282 16016302 -73488251 + (TC)n Simple_repeat Simple_repeat 1 20 0 4185 242 93 27 chr17 16016302 16016641 -73487912 - L1MEc LINE L1 -6045 351 36 217 260 198 10 chr17 16017339 16017435 -73487118 + L2 LINE L2 3159 3272 0 1210 228 71 15 chr17 16017902 16018227 -73486326 - MER2 DNA MER2_type 0 344 2 507 33 0 0 chr17 16019159 16019220 -73485333 + (TTTTA)n Simple_repeat Simple_repeat 2 62 0 1835 161 29 0 chr17 16019223 16019497 -73485056 - AluJo SINE Alu -30 282 1 2423 143 16 0 chr17 16019568 16019947 -73484606 - MLT1B LTR MaLR 0 390 6 618 224 54 24 chr17 16020359 16020564 -73483989 - L1M4 LINE L1 -825 5321 5111 745 274 207 18 chr17 16022156 16022499 -73482054 + MLT1I LTR MaLR 1 408 -1 2306 96 0 3 chr17 16022890 16023182 -73481371 + AluSc SINE Alu 1 291 -18 758 172 0 8 chr17 16023446 16023580 -73480973 - FLAM_C SINE Alu -10 133 1 230 228 88 0 chr17 16024308 16024365 -73480188 - L1M4 LINE L1 -1300 4846 4785 2003 151 89 25 chr17 16025008 16025412 -73479141 + MSTB1 LTR MaLR 3 432 0 568 188 10 0 chr17 16026501 16026597 -73477956 - MER3 DNA MER1_type -112 97 1 1649 73 162 4 chr17 16026966 16027225 -73477328 - AluYa8 SINE Alu 0 300 1 194 270 81 27 chr17 16027502 16027613 -73476940 + L2 LINE L2 2649 2765 -549 672 140 158 117 chr17 16027620 16027706 -73476847 - MER45A DNA AcHobo -1403 178 97 2149 131 3 0 chr17 16027706 16028004 -73476549 + AluSx SINE Alu 1 299 -13 672 140 158 117 chr17 16028004 16028088 -73476465 - MER45A DNA AcHobo -1484 97 1 340 368 70 30 chr17 16028124 16028453 -73476100 + L2 LINE L2 2927 3268 -4 21 36 0 0 chr17 16029029 16029057 -73475496 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr17 16029092 16029132 -73475421 + AT_rich Low_complexity Low_complexity 1 40 0 2312 98 3 13 chr17 16030515 16030822 -73473731 - AluSp SINE Alu -9 304 1 550 277 130 28 chr17 16030982 16031235 -73473318 - MLT1I LTR MaLR 0 409 131 21 0 0 0 chr17 16031598 16031619 -73472934 + AT_rich Low_complexity Low_complexity 1 21 0 262 335 84 19 chr17 16031729 16031884 -73472669 + MIR SINE MIR 2 166 -96 2912 10 0 3 chr17 16032168 16032481 -73472072 + AluYb8 SINE Alu 1 312 -6 1003 243 178 48 chr17 16032635 16033092 -73471461 - MLT1G1 LTR MaLR -3 592 35 1513 176 0 4 chr17 16034001 16034245 -73470308 - AluJo SINE Alu -38 274 32 236 341 11 0 chr17 16034348 16034436 -73470117 - MER117 DNA MER1_type -108 89 1 21 0 0 0 chr17 16035918 16035939 -73468614 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 16037157 16037185 -73467368 + AT_rich Low_complexity Low_complexity 1 28 0 294 245 11 32 chr17 16037300 16037394 -73467159 - MIR3 SINE MIR -5 203 112 200 368 26 13 chr17 16037606 16037758 -73466795 + L2 LINE L2 2898 3051 -221 360 0 0 0 chr17 16038956 16038996 -73465557 + (TG)n Simple_repeat Simple_repeat 1 40 0 343 295 33 8 chr17 16040192 16040314 -73464239 + MIR SINE MIR 28 152 -110 243 213 0 49 chr17 16040380 16040441 -73464112 + (CAT)n Simple_repeat Simple_repeat 2 59 0 210 328 0 0 chr17 16040912 16040973 -73463580 + L3b LINE CR1 1281 1341 -242 981 97 62 28 chr17 16041227 16041403 -73463150 - L1MB3 LINE L1 -1 6182 6001 629 265 20 20 chr17 16041863 16042063 -73462490 - MER63A DNA MER1_type -10 200 1 409 182 98 53 chr17 16042182 16042314 -73462239 + MER69A DNA AcHobo 8 145 -32 2175 127 7 74 chr17 16043180 16043598 -73460955 + MLT1B LTR MaLR 1 390 0 784 93 0 19 chr17 16044212 16044320 -73460233 + U6 snRNA snRNA 2 107 0 1173 109 20 30 chr17 16044320 16044521 -73460032 + L1MA5A LINE L1 6095 6293 -4 640 293 96 43 chr17 16045658 16046098 -73458455 + L1ME4a LINE L1 5379 5841 -280 230 163 102 0 chr17 16046133 16046182 -73458371 + L1MB8 LINE L1 6117 6170 -8 2301 102 10 0 chr17 16046370 16046673 -73457880 - AluSx SINE Alu -6 306 1 499 298 130 14 chr17 16047885 16048170 -73456383 - L2 LINE L2 -5 3308 2991 * 1203 274 165 18 chr17 16048157 16048715 -73455838 - L2 LINE L2 -488 2826 2187 649 246 34 6 chr17 16049302 16049481 -73455072 + L1PB4 LINE L1 5961 6144 -12 2639 64 0 0 chr17 16050844 16051155 -73453398 - AluY SINE Alu 0 311 1 25 0 0 0 chr17 16051349 16051374 -73453179 + AT_rich Low_complexity Low_complexity 1 25 0 1506 172 8 27 chr17 16051411 16051672 -73452881 - AluJo SINE Alu -22 290 35 719 129 8 32 chr17 16051693 16051817 -73452736 - L1MA3 LINE L1 -5 6300 6180 326 187 40 27 chr17 16052885 16052960 -73451593 - L1ME LINE L1 -501 5620 5545 359 286 106 42 chr17 16053094 16053451 -73451102 - L1ME LINE L1 -743 5403 5024 2481 75 0 0 chr17 16053880 16054175 -73450378 - AluY SINE Alu -16 295 1 503 281 39 6 chr17 16054908 16055086 -73449467 + L1PB4 LINE L1 5961 6144 -12 181 312 65 13 chr17 16055115 16055192 -73449361 + MIR SINE MIR 20 100 -162 3408 196 30 22 chr17 16056786 16057085 -73447468 - L1MB8 LINE L1 -6 6172 5874 684 279 91 29 chr17 16057085 16057599 -73446954 - L1PB1 LINE L1 -271 5880 5248 * 2995 206 51 19 chr17 16057593 16058315 -73446238 - L1MB8 LINE L1 -944 5202 4458 737 246 18 12 chr17 16058326 16058497 -73446056 + MER5B DNA MER1_type 6 177 -1 657 253 39 91 chr17 16059808 16060102 -73444451 + L1ME4a LINE L1 5562 5833 -288 2274 108 7 0 chr17 16060102 16060397 -73444156 + AluSq SINE Alu 1 297 -16 657 253 39 91 chr17 16060397 16060486 -73444067 + L1ME4a LINE L1 5833 5925 -196 230 280 121 8 chr17 16061663 16061795 -73442758 + L1ME LINE L1 5770 5916 -205 617 319 72 16 chr17 16061830 16062150 -73442403 - L1ME LINE L1 -451 5670 5333 2797 135 29 5 chr17 16063165 16063581 -73440972 + MSTA LTR MaLR 3 428 0 1414 120 9 60 chr17 16064823 16065056 -73439497 + AluSx SINE Alu 61 281 -31 195 42 0 0 chr17 16065059 16065083 -73439470 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 349 274 130 7 chr17 16065083 16065229 -73439324 + L1MEc LINE L1 39 202 -6194 565 209 0 26 chr17 16065231 16065346 -73439207 + MIR SINE MIR 70 181 -81 184 291 47 23 chr17 16065541 16065627 -73438926 + MIR SINE MIR 165 252 -10 233 238 24 24 chr17 16065896 16065980 -73438573 - L1MC/D LINE L1 -1926 5882 5799 437 0 0 19 chr17 16066589 16066643 -73437910 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 2214 74 0 14 chr17 16066645 16066929 -73437624 - AluY SINE Alu -31 280 1 1658 152 48 24 chr17 16066931 16067221 -73437332 - AluJb SINE Alu -15 297 1 1531 301 117 22 chr17 16067752 16068752 -73435801 + L1ME3A LINE L1 2 1096 -5300 1929 266 65 27 chr17 16068779 16068970 -73435583 + L1ME3A LINE L1 1136 1318 -5078 267 103 0 0 chr17 16068970 16069009 -73435544 + (CA)n Simple_repeat Simple_repeat 2 40 0 1929 266 65 27 chr17 16069009 16069665 -73434888 + L1ME3A LINE L1 1318 2068 -4328 1580 188 141 44 chr17 16069665 16070139 -73434414 + Charlie1b DNA MER1_type 4 523 0 1278 251 113 34 chr17 16070184 16070428 -73434125 + L1ME3A LINE L1 2108 2331 -3884 2384 94 0 0 chr17 16070428 16070736 -73433817 + AluSg1 SINE Alu 1 308 -1 1278 251 113 34 chr17 16070736 16071068 -73433485 + L1ME3A LINE L1 2331 2697 -3518 934 259 4 4 chr17 16071056 16071295 -73433258 + L1ME3A LINE L1 3416 3654 -2561 * 2133 61 13 55 chr17 16071371 16071682 -73432871 - AluY SINE Alu -13 298 1 1964 195 50 8 chr17 16071848 16072228 -73432325 + MSTD LTR MaLR 1 396 0 746 248 112 10 chr17 16072808 16073102 -73431451 + L1ME3A LINE L1 5590 5913 -326 1972 73 48 48 chr17 16073134 16073423 -73431130 + AluSg SINE Alu 1 289 -21 348 258 114 34 chr17 16075022 16075207 -73429346 - MIR SINE MIR -36 226 31 435 259 9 9 chr17 16076390 16076498 -73428055 + L2 LINE L2 3160 3267 -5 326 245 22 86 chr17 16076889 16076958 -73427595 + L2 LINE L2 2818 2876 -438 2084 108 3 11 chr17 16076958 16077276 -73427277 - AluSp SINE Alu 0 316 1 326 245 22 86 chr17 16077276 16077344 -73427209 + L2 LINE L2 2876 2947 -367 653 286 34 50 chr17 16078369 16078631 -73425922 - MIR SINE MIR 0 262 5 330 291 0 0 chr17 16079464 16079567 -73424986 + MER103 DNA DNA 1 103 -63 237 33 0 0 chr17 16079867 16079897 -73424656 + (TG)n Simple_repeat Simple_repeat 1 30 0 1440 193 92 13 chr17 16079956 16080272 -73424281 + MER2 DNA MER2_type 2 342 -3 225 266 16 64 chr17 16080279 16080467 -73424086 + G-rich Low_complexity Low_complexity 1 179 0 236 277 15 15 chr17 16081147 16081212 -73423341 - MIR SINE MIR -114 148 84 259 340 21 31 chr17 16081294 16081391 -73423162 + L2 LINE L2 3105 3200 -72 528 223 122 32 chr17 16081405 16081593 -73422960 - MIR SINE MIR -38 224 20 4034 182 78 3 chr17 16082828 16083298 -73421255 - MER63C DNA MER1_type -130 930 496 198 0 0 0 chr17 16083298 16083320 -73421233 + (CA)n Simple_repeat Simple_repeat 1 22 0 4034 182 78 3 chr17 16083320 16083701 -73420852 - MER63C DNA MER1_type -564 496 16 832 305 60 42 chr17 16084344 16084826 -73419727 + LTR16C LTR ERVL 1 491 0 399 295 11 0 chr17 16086124 16086219 -73418334 - MER5A DNA MER1_type -24 165 70 430 215 65 9 chr17 16086589 16086696 -73417857 - MIR3 SINE MIR -9 199 87 185 193 0 35 chr17 16087119 16087176 -73417377 + (CATA)n Simple_repeat Simple_repeat 2 56 0 244 313 9 61 chr17 16087960 16088075 -73416478 + MIR3 SINE MIR 10 118 -90 693 70 0 0 chr17 16088081 16088167 -73416386 + L1PA5 LINE L1 11 96 -6050 38857 46 4 1 chr17 16088167 16093670 -73410883 + L1PA5 LINE L1 623 6141 -13 486 49 0 0 chr17 16093670 16093731 -73410822 + (TA)n Simple_repeat Simple_repeat 2 62 0 38857 46 4 1 chr17 16093731 16093742 -73410811 + L1PA5 LINE L1 6141 6150 -4 205 171 0 0 chr17 16093878 16093913 -73410640 + A-rich Low_complexity Low_complexity 3 37 0 270 256 51 0 chr17 16093913 16093991 -73410562 + MIR SINE MIR 111 192 -70 350 288 204 12 chr17 16094744 16094994 -73409559 + Charlie2 DNA MER1_type 29 326 -2456 2195 206 93 65 chr17 16094994 16095720 -73408833 + Charlie2 DNA MER1_type 1856 2616 -246 2146 54 8 0 chr17 16095720 16096005 -73408548 - AluY SINE Alu 0 308 22 2195 206 93 65 chr17 16096005 16096186 -73408367 + Charlie2 DNA MER1_type 2616 2790 -72 1022 127 0 0 chr17 16096189 16096346 -73408207 + L1MA2 LINE L1 6046 6202 -102 463 121 0 0 chr17 16096346 16096405 -73408148 + L1MA3 LINE L1 6239 6304 -1 2405 94 0 0 chr17 16096857 16097155 -73407398 + AluSg SINE Alu 1 298 -12 1896 108 31 83 chr17 16098008 16098333 -73406220 - AluSg SINE Alu -2 308 1 401 306 61 5 chr17 16098412 16098519 -73406034 + MER5A DNA MER1_type 6 129 -60 2161 70 56 0 chr17 16098519 16098804 -73405749 - AluYa5 SINE Alu -10 301 1 401 306 61 5 chr17 16098804 16098868 -73405685 + MER5A DNA MER1_type 129 188 -1 3168 239 9 24 chr17 16099222 16100020 -73404533 + L1M4 LINE L1 3680 4465 -1681 2176 115 3 3 chr17 16100026 16100331 -73404222 - AluSx SINE Alu -7 305 1 2210 100 3 7 chr17 16100526 16100827 -73403726 - AluSx SINE Alu -12 300 1 442 311 50 31 chr17 16101227 16101388 -73403165 - MIR3 SINE MIR -9 199 36 1981 93 0 0 chr17 16101999 16102247 -73402306 + AluY SINE Alu 43 290 -21 383 254 175 87 chr17 16102367 16102997 -73401556 - L1MC4a LINE L1 -733 5418 5269 1831 154 62 22 chr17 16103204 16103528 -73401025 - MER1B DNA MER1_type 0 337 1 267 294 77 0 chr17 16103547 16103690 -73400863 - L1MC4a LINE L1 -2172 3974 3821 24 50 0 33 chr17 16103696 16103720 -73400833 + AT_rich Low_complexity Low_complexity 1 24 -34 2054 109 51 0 chr17 16103720 16104014 -73400539 - AluSq SINE Alu -4 309 1 24 50 0 33 chr17 16104014 16104049 -73400504 + AT_rich Low_complexity Low_complexity 24 58 0 268 261 106 43 chr17 16104110 16104298 -73400255 - HAL1 LINE L1 -209 2298 2099 24 0 0 0 chr17 16104300 16104324 -73400229 + AT_rich Low_complexity Low_complexity 1 24 0 317 271 26 65 chr17 16104517 16104672 -73399881 - HAL1 LINE L1 -699 1808 1660 5791 122 39 34 chr17 16104686 16105170 -73399383 - Tigger3(Golem) DNA MER2_type -1 3028 2548 2393 62 0 16 chr17 16105170 16105478 -73399075 + AluY SINE Alu 1 303 -8 5791 122 39 34 chr17 16105478 16105607 -73398946 - Tigger3(Golem) DNA MER2_type -481 2548 2421 2315 101 3 0 chr17 16105607 16105904 -73398649 + AluSp SINE Alu 1 298 -15 5791 122 39 34 chr17 16105904 16106272 -73398281 - Tigger3(Golem) DNA MER2_type -608 2421 2041 734 226 14 7 chr17 16106244 16106390 -73398163 - Tigger3(Golem) DNA MER2_type -2882 147 1 * 1022 247 113 111 chr17 16106391 16106820 -73397733 - HAL1 LINE L1 -860 1647 1220 2368 99 3 0 chr17 16106820 16107123 -73397430 + AluSx SINE Alu 1 304 -8 1022 247 113 111 chr17 16107123 16107573 -73396980 - HAL1 LINE L1 -1287 1220 767 252 282 15 122 chr17 16107901 16108163 -73396390 - HAL1 LINE L1 -2169 338 105 2555 137 45 9 chr17 16108613 16109060 -73395493 + L1MB3 LINE L1 5717 6179 -4 2230 94 3 0 chr17 16109364 16109673 -73394880 - AluSp SINE Alu -3 310 1 365 244 118 17 chr17 16111140 16111259 -73393294 - MIR SINE MIR -98 164 34 224 306 115 87 chr17 16111326 16111509 -73393044 + MIR SINE MIR 42 229 -33 2334 65 0 23 chr17 16112260 16112566 -73391987 + AluY SINE Alu 1 299 -12 2171 108 0 9 chr17 16112826 16113142 -73391411 - AluSq SINE Alu 0 313 1 1863 225 67 44 chr17 16113279 16113749 -73390804 + MER82 DNA MER2_type 90 576 -77 2128 85 0 36 chr17 16113749 16114054 -73390499 - AluY SINE Alu -17 294 1 1863 225 67 44 chr17 16114054 16114134 -73390419 + MER82 DNA MER2_type 576 653 0 739 319 76 0 chr17 16114165 16114403 -73390150 + MIR SINE MIR 1 256 -6 255 266 101 9 chr17 16115407 16115516 -73389037 + MER117 DNA MER1_type 1 119 -78 537 272 71 28 chr17 16115746 16115971 -73388582 + MIR SINE MIR 31 262 0 475 272 82 6 chr17 16116368 16116526 -73388027 - MIR SINE MIR -90 172 3 632 272 63 47 chr17 16116529 16116830 -73387723 - L1ME4a LINE L1 -295 5826 5521 398 273 62 3 chr17 16117001 16117136 -73387417 - MIR SINE MIR -66 142 2 329 320 47 52 chr17 16117390 16117562 -73386991 - MIR3 SINE MIR -18 190 20 258 105 0 0 chr17 16117747 16117785 -73386768 + (A)n Simple_repeat Simple_repeat 1 38 0 610 145 0 86 chr17 16117794 16117911 -73386642 + AluJo SINE Alu 29 135 -177 225 203 29 14 chr17 16118022 16118091 -73386462 + L1P LINE L1 5304 5373 -781 1549 192 46 8 chr17 16118428 16118818 -73385735 + L1ME1 LINE L1 5206 5604 -562 4834 178 70 23 chr17 16118820 16119225 -73385328 + L1MD2 LINE L1 5186 5571 -788 2229 67 37 0 chr17 16119225 16119523 -73385030 - AluSc SINE Alu 0 309 1 4834 178 70 23 chr17 16119523 16120238 -73384315 + L1MD2 LINE L1 5571 6357 -2 1358 197 51 120 chr17 16120220 16120752 -73383801 + L1ME1 LINE L1 5571 6065 -101 * 289 204 174 23 chr17 16120705 16120837 -73383716 + L1MA10 LINE L1 6178 6329 -5 * 1320 234 87 65 chr17 16121860 16122352 -73382201 + MLT1J LTR MaLR 1 503 -8 292 344 30 23 chr17 16123233 16123364 -73381189 - L2 LINE L2 -176 3096 2965 2366 187 24 2 chr17 16124514 16124931 -73379622 + MSTB LTR MaLR 1 426 0 272 311 39 0 chr17 16125424 16125527 -73379026 - MIR3 SINE MIR -3 205 99 183 353 82 55 chr17 16126512 16126767 -73377786 + L2 LINE L2 2716 2977 -337 669 278 55 93 chr17 16126893 16126949 -73377604 - MLT1J LTR MaLR -147 364 307 2146 107 0 0 chr17 16126949 16127239 -73377314 + AluSg SINE Alu 1 290 -20 669 278 55 93 chr17 16127239 16127527 -73377026 - MLT1J LTR MaLR -204 307 33 301 174 174 0 chr17 16128548 16128617 -73375936 - MIR SINE MIR -72 190 110 1406 107 5 0 chr17 16128655 16128872 -73375681 - AluSq SINE Alu 0 304 87 268 98 0 273 chr17 16129340 16129395 -73375158 + L1MB3 LINE L1 6088 6088 -95 2404 70 0 10 chr17 16129395 16129708 -73374845 + AluY SINE Alu 1 310 -1 268 98 0 273 chr17 16129708 16129784 -73374769 + L1MB3 LINE L1 6088 6183 0 2047 125 3 3 chr17 16130107 16130459 -73374094 + AluSx SINE Alu 1 352 0 1320 261 80 39 chr17 16131445 16131932 -73372621 - HAL1 LINE L1 -2000 507 1 1738 138 4 14 chr17 16132691 16132966 -73371587 + AluSx SINE Alu 13 284 -28 333 0 0 0 chr17 16132982 16133019 -73371534 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 273 384 75 31 chr17 16133136 16133328 -73371225 - L2 LINE L2 0 3272 3090 8238 111 9 46 chr17 16133328 16133483 -73371070 - HSMAR2 DNA Mariner -2 1300 1141 2422 58 0 19 chr17 16133483 16133794 -73370759 + AluY SINE Alu 1 305 -6 8238 111 9 46 chr17 16133794 16133834 -73370719 - HSMAR2 DNA Mariner -161 1141 1101 2308 88 7 3 chr17 16133834 16134141 -73370412 - AluSx SINE Alu -4 308 1 8238 111 9 46 chr17 16134141 16135293 -73369260 - HSMAR2 DNA Mariner -201 1101 2 273 384 75 31 chr17 16135293 16135394 -73369159 - L2 LINE L2 -182 3090 2966 365 343 161 16 chr17 16135454 16135877 -73368676 - L2 LINE L2 -460 2854 2371 2288 117 17 50 chr17 16136671 16137074 -73367479 + MLT1B LTR MaLR 1 390 0 203 275 14 29 chr17 16137149 16137218 -73367335 + MIR SINE MIR 8 75 -187 517 274 60 35 chr17 16138237 16138386 -73366167 - MIR3 SINE MIR -39 169 17 441 252 10 0 chr17 16138405 16138508 -73366045 - MER33 DNA MER1_type -1 362 259 581 202 0 0 chr17 16138516 16138610 -73365943 - Tigger3(Golem) DNA MER2_type -18 3011 2918 341 227 80 0 chr17 16138608 16138683 -73365870 - Tigger3(Golem) DNA MER2_type -2948 81 1 * 838 206 66 66 chr17 16139654 16139955 -73364598 + MER33 DNA MER1_type 24 324 0 500 180 150 0 chr17 16140352 16140452 -73364101 + L1MD2 LINE L1 6037 6151 -208 316 109 0 0 chr17 16140457 16140503 -73364050 + L1MD1 LINE L1 6174 6219 -23 2598 136 56 21 chr17 16140515 16140664 -73363889 + L1MB3 LINE L1 5681 5823 -360 2161 106 7 0 chr17 16140664 16140967 -73363586 + AluSx SINE Alu 2 306 -6 2598 136 56 21 chr17 16140967 16141250 -73363303 + L1MB3 LINE L1 5823 6134 -49 1830 151 3 22 chr17 16141250 16141568 -73362985 + 7SLRNA srpRNA srpRNA 1 312 -8 2598 136 56 21 chr17 16141568 16141613 -73362940 + L1MB3 LINE L1 6134 6176 -7 246 32 0 0 chr17 16142141 16142172 -73362381 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 325 280 120 47 chr17 16143522 16143672 -73360881 + HAL1b LINE L1 1188 1348 0 1614 165 26 10 chr17 16143750 16144053 -73360500 + AluJb SINE Alu 1 308 -4 27 0 0 0 chr17 16144196 16144223 -73360330 + AT_rich Low_complexity Low_complexity 1 27 0 1534 182 40 85 chr17 16145151 16145552 -73359001 - MLT1B LTR MaLR 0 390 8 216 263 105 79 chr17 16147368 16147520 -73357033 - L2 LINE L2 -32 3281 3126 264 329 102 22 chr17 16147679 16147816 -73356737 - L3 LINE CR1 -3 1574 1427 2098 119 0 0 chr17 16149496 16149790 -73354763 - AluSx SINE Alu -16 296 3 2294 61 0 3 chr17 16149870 16150163 -73354390 + AluY SINE Alu 3 294 -17 651 235 44 49 chr17 16150265 16150448 -73354105 + MER63A DNA MER1_type 27 208 -2 395 252 25 17 chr17 16150517 16150636 -73353917 + MIR SINE MIR 129 248 -14 856 308 76 50 chr17 16152373 16153028 -73351525 + L1MC4a LINE L1 4723 5394 -752 1706 66 4 85 chr17 16153083 16153284 -73351269 - L1P LINE L1 -766 5380 5164 198 0 0 0 chr17 16153284 16153306 -73351247 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1706 66 4 85 chr17 16153306 16153319 -73351234 - L1P LINE L1 -982 5164 5152 1777 79 12 8 chr17 16153319 16153560 -73350993 - AluY SINE Alu -54 257 16 1706 66 4 85 chr17 16153560 16153615 -73350938 - L1P LINE L1 -994 5152 5132 2184 55 0 7 chr17 16153615 16153884 -73350669 - L1PA8 LINE L1 -191 5981 5715 995 61 7 41 chr17 16153884 16154030 -73350523 + L1PA8 LINE L1 6026 6167 -5 2184 55 0 7 chr17 16154030 16154048 -73350505 - L1PA8 LINE L1 -457 5715 5698 296 378 0 0 chr17 16154034 16154145 -73350408 + L1MC4a LINE L1 5482 5592 -529 * 418 274 83 6 chr17 16154188 16154345 -73350208 + L1MC4a LINE L1 5695 5863 -1945 589 256 152 105 chr17 16154435 16154529 -73350024 - L2 LINE L2 -4 3309 3221 2023 90 20 17 chr17 16154529 16154828 -73349725 + AluSq SINE Alu 13 312 -1 589 256 152 105 chr17 16154828 16154878 -73349675 - L2 LINE L2 -92 3221 3175 2236 85 0 3 chr17 16154878 16155183 -73349370 - AluY SINE Alu -7 304 1 589 256 152 105 chr17 16155183 16155612 -73348941 - L2 LINE L2 -138 3175 2725 1173 219 17 41 chr17 16155910 16156202 -73348351 - LTR16C LTR ERVL 0 491 207 2072 116 7 7 chr17 16156434 16156735 -73347818 + AluSx SINE Alu 1 301 -11 202 284 45 0 chr17 16157230 16157297 -73347256 + MIR3 SINE MIR 98 167 -41 369 327 19 19 chr17 16157377 16157536 -73347017 - MARNA DNA Mariner -388 198 40 463 323 24 12 chr17 16157855 16158022 -73346531 + MER5A DNA MER1_type 8 176 -13 1294 184 46 35 chr17 16158088 16158606 -73345947 - MLT1F1 LTR MaLR 0 567 1 2445 56 3 0 chr17 16158610 16158913 -73345640 + AluY SINE Alu 1 304 -7 195 374 30 30 chr17 16158920 16158978 -73345575 + L2 LINE L2 2922 2979 -293 321 47 0 0 chr17 16158978 16159021 -73345532 + (CA)n Simple_repeat Simple_repeat 2 44 0 195 374 30 30 chr17 16159021 16159080 -73345473 + L2 LINE L2 2978 3039 -233 400 319 9 9 chr17 16159080 16159196 -73345357 + MER91B DNA MER1_type 1 116 -74 1870 155 3 3 chr17 16159704 16159994 -73344559 + MLT1A1 LTR MaLR 1 290 -75 245 319 59 7 chr17 16160090 16160225 -73344328 + L1MC4a LINE L1 5788 5929 -1879 261 248 40 120 chr17 16160280 16160405 -73344148 + MER91C DNA MER1_type 26 140 0 349 231 73 74 chr17 16160736 16161036 -73343517 + L1ME4a LINE L1 5697 6017 -104 1328 207 90 16 chr17 16161155 16161522 -73343031 - Charlie4a DNA MER1_type -94 414 21 2186 81 0 66 chr17 16161833 16162167 -73342386 - AluSx SINE Alu 0 312 1 261 185 0 0 chr17 16162202 16162267 -73342286 + (ATGGTG)n Simple_repeat Simple_repeat 4 68 0 * 662 202 6 0 chr17 16162254 16162432 -73342121 + (TGG)n Simple_repeat Simple_repeat 2 180 0 23 54 0 0 chr17 16163410 16163447 -73341106 + AT_rich Low_complexity Low_complexity 1 37 0 275 167 26 64 chr17 16163467 16163545 -73341008 + GA-rich Low_complexity Low_complexity 3 77 0 288 327 45 0 chr17 16164825 16164935 -73339618 - L2 LINE L2 -2 3311 3197 189 0 0 0 chr17 16166537 16166558 -73337995 + (A)n Simple_repeat Simple_repeat 1 21 0 2144 90 10 16 chr17 16166768 16167078 -73337475 - AluSq SINE Alu -5 308 1 2043 122 3 3 chr17 16168334 16168638 -73335915 + AluSx SINE Alu 2 305 -7 1641 209 171 48 chr17 16169669 16170358 -73334195 + LTR50 LTR ERVL 15 788 -7 197 303 219 0 chr17 16171315 16171427 -73333126 + MIR SINE MIR 78 215 -47 629 292 50 5 chr17 16171427 16171646 -73332907 + MIR SINE MIR 1 229 -33 313 234 315 0 chr17 16171676 16171787 -73332766 - MIR SINE MIR -71 191 46 3740 32 2 2 chr17 16172520 16172960 -73331593 + L1PA5 LINE L1 5707 6146 -8 526 146 67 0 chr17 16173708 16173797 -73330756 - MER5A DNA MER1_type -1 188 94 368 180 0 0 chr17 16174061 16174122 -73330431 - MER5A DNA MER1_type -125 64 4 827 259 5 5 chr17 16174133 16174322 -73330231 - MER5A DNA MER1_type 0 189 1 225 265 265 15 chr17 16174860 16174992 -73329561 - L3 LINE CR1 -39 1538 1374 2200 116 3 0 chr17 16174992 16175303 -73329250 + AluSx SINE Alu 1 312 0 211 281 35 0 chr17 16176034 16176091 -73328462 + MIR SINE MIR 88 146 -116 1757 156 16 25 chr17 16176131 16176446 -73328107 - AluJo SINE Alu 0 312 1 574 267 41 6 chr17 16177189 16177361 -73327192 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr17 16177392 16177414 -73327139 + AT_rich Low_complexity Low_complexity 1 22 0 1011 113 7 0 chr17 16177436 16177577 -73326976 + AluSq/x SINE Alu 3 144 -168 288 0 0 0 chr17 16177578 16177610 -73326943 + (GA)n Simple_repeat Simple_repeat 2 33 0 365 274 82 20 chr17 16178222 16178368 -73326185 + MER103 DNA DNA 10 164 -2 199 236 36 36 chr17 16180096 16180151 -73324402 - L2 LINE L2 -82 3190 3136 583 335 70 17 chr17 16181521 16181924 -73322629 + L2 LINE L2 444 867 -2447 308 350 17 17 chr17 16181933 16182053 -73322500 + L2 LINE L2 1095 1214 -2100 813 256 20 32 chr17 16182057 16182303 -73322250 - MIR SINE MIR 0 262 20 3248 176 15 3 chr17 16182431 16183039 -73321514 - L1PB4 LINE L1 -4 6152 5538 1347 297 137 30 chr17 16183050 16183889 -73320664 + L2 LINE L2 1707 2455 -858 2799 85 6 3 chr17 16183889 16184252 -73320301 + THE1B LTR MaLR 1 364 0 1347 297 137 30 chr17 16184252 16184801 -73319752 + L2 LINE L2 2455 3252 -61 441 202 42 99 chr17 16185024 16185186 -73319367 + MIR SINE MIR 34 190 -63 312 91 0 0 chr17 16185714 16185758 -73318795 + (TC)n Simple_repeat Simple_repeat 1 44 0 382 285 68 68 chr17 16186607 16186828 -73317725 + MIR SINE MIR 23 243 -19 213 333 0 0 chr17 16187318 16187381 -73317172 + (CA)n Simple_repeat Simple_repeat 1 63 0 407 301 72 25 chr17 16187585 16187769 -73316784 + MIR SINE MIR 8 206 -56 2130 257 40 29 chr17 16188285 16188864 -73315689 + MLT1E LTR MaLR 7 591 -2 306 0 0 0 chr17 16189427 16189461 -73315092 + (CA)n Simple_repeat Simple_repeat 2 35 0 197 188 42 21 chr17 16189935 16189983 -73314570 + MIR SINE MIR 99 147 -115 743 224 21 36 chr17 16191655 16191847 -73312706 + MER5A DNA MER1_type 1 189 0 2460 64 0 6 chr17 16192296 16192609 -73311944 - AluY SINE Alu 0 311 1 526 282 163 37 chr17 16192753 16193207 -73311346 + L2 LINE L2 2021 2531 -783 514 289 34 7 chr17 16193303 16193452 -73311101 - MIR SINE MIR -54 208 56 655 289 76 32 chr17 16193478 16194120 -73310433 + L2 LINE L2 2589 3262 -51 187 253 80 27 chr17 16194119 16194194 -73310359 - L2 LINE L2 -35 3237 3159 * 249 234 31 16 chr17 16194237 16194301 -73310252 - L2 LINE L2 -191 3081 3017 755 224 24 30 chr17 16194377 16194542 -73310011 - MER5A DNA MER1_type -23 166 3 2417 59 3 0 chr17 16195011 16195315 -73309238 + AluY SINE Alu 1 305 -6 827 207 30 114 chr17 16195435 16195802 -73308751 + L1ME3A LINE L1 5785 6120 -50 392 273 66 8 chr17 16196916 16197037 -73307516 + MIR SINE MIR 3 130 -132 596 152 25 8 chr17 16197796 16198327 -73306226 + (CA)n Simple_repeat Simple_repeat 1 540 0 305 209 25 0 chr17 16198398 16198561 -73305992 + (CA)n Simple_repeat Simple_repeat 2 168 0 213 213 0 0 chr17 16198892 16198939 -73305614 + G-rich Low_complexity Low_complexity 2 48 0 283 213 98 0 chr17 16199015 16199076 -73305477 - MIR SINE MIR -180 82 16 1366 122 18 140 chr17 16199387 16199716 -73304837 - AluJo SINE Alu -7 305 17 339 232 60 108 chr17 16199979 16200164 -73304389 + MER5B DNA MER1_type 2 177 -1 248 137 20 0 chr17 16200690 16200741 -73303812 + (CA)n Simple_repeat Simple_repeat 2 53 0 317 288 53 30 chr17 16200834 16200966 -73303587 + MER5A DNA MER1_type 16 150 -39 * 693 171 34 0 chr17 16200851 16200968 -73303585 - MER5A DNA MER1_type -21 168 48 514 254 26 69 chr17 16202759 16202948 -73301605 - MIR SINE MIR -34 228 48 1110 242 130 54 chr17 16203519 16204057 -73300496 - L1MC5 LINE L1 -424 7537 6959 301 206 63 0 chr17 16204062 16204125 -73300428 + MLT1J LTR MaLR 445 511 0 248 387 57 8 chr17 16204166 16204290 -73300263 + L2 LINE L2 3141 3270 -2 2130 96 3 0 chr17 16204447 16204740 -73299813 + AluY SINE Alu 1 294 -17 469 229 103 16 chr17 16204762 16204953 -73299600 + L1MC4a LINE L1 5693 5799 -379 409 244 36 54 chr17 16204966 16205134 -73299419 + L1MC5 LINE L1 7771 7935 -26 4195 185 72 15 chr17 16205310 16206126 -73298427 + MER21B LTR ERV1 1 863 0 2095 103 13 0 chr17 16206254 16206554 -73297999 + AluY SINE Alu 1 304 -7 1077 225 7 44 chr17 16206959 16207230 -73297323 - MIR SINE MIR 0 262 2 1505 161 37 22 chr17 16207441 16207765 -73296788 + L1MB8 LINE L1 5850 6178 0 2195 69 0 21 chr17 16207861 16208212 -73296341 + AluY SINE Alu 1 345 0 217 367 10 10 chr17 16209117 16209215 -73295338 - MER5B DNA MER1_type -30 148 51 719 145 26 13 chr17 16209284 16209436 -73295117 - L1MA7 LINE L1 -2 6289 6136 4111 160 55 38 chr17 16209436 16210235 -73294318 + L1MA7 LINE L1 5322 6134 -157 1536 199 32 67 chr17 16210316 16210355 -73294198 + LTR52 LTR ERVL 1 40 -381 1391 203 34 14 chr17 16210355 16210522 -73294031 - AluJo SINE Alu -11 301 124 245 29 29 0 chr17 16210522 16210556 -73293997 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1391 203 34 14 chr17 16210556 16210683 -73293870 - AluJo SINE Alu -188 124 1 1536 199 32 67 chr17 16210683 16210842 -73293711 + LTR52 LTR ERVL 40 203 -218 2721 13 0 0 chr17 16210842 16211148 -73293405 + AluYb8 SINE Alu 1 306 -12 1536 199 32 67 chr17 16211148 16211159 -73293394 + LTR52 LTR ERVL 203 213 -208 1015 106 0 0 chr17 16211159 16211291 -73293262 + FLAM_C SINE Alu 1 132 -1 1536 199 32 67 chr17 16211291 16211397 -73293156 + LTR52 LTR ERVL 213 302 -119 1559 91 30 35 chr17 16211397 16211628 -73292925 + MER30 DNA MER1_type 1 230 0 1536 199 32 67 chr17 16211628 16211742 -73292811 + LTR52 LTR ERVL 302 418 -3 257 311 29 19 chr17 16212991 16213094 -73291459 + MIR SINE MIR 63 166 -96 527 266 32 83 chr17 16213568 16213724 -73290829 - MIR SINE MIR -6 256 111 2007 96 7 0 chr17 16213724 16214045 -73290508 + AluSx SINE Alu 1 323 0 527 266 32 83 chr17 16214045 16214105 -73290448 - MIR SINE MIR -151 111 50 231 224 17 17 chr17 16214356 16214414 -73290139 - MIR SINE MIR -86 176 119 320 350 10 0 chr17 16215347 16215447 -73289106 + L2 LINE L2 3186 3286 -27 324 236 0 56 chr17 16215815 16215904 -73288649 + L1MC4 LINE L1 6620 6703 -1339 2124 181 61 11 chr17 16216101 16216543 -73288010 + MLT1C LTR MaLR 4 467 0 379 260 31 97 chr17 16216576 16216772 -73287781 - MLT1K LTR MaLR -149 439 257 1875 276 114 22 chr17 16217003 16217902 -73286651 - L2 LINE L2 0 3313 2331 562 169 64 99 chr17 16217903 16218470 -73286083 + LTR48 LTR ERV1 1 518 -24 893 107 0 0 chr17 16218552 16218673 -73285880 - AluSq/x SINE Alu -188 125 5 404 227 93 0 chr17 16218727 16218824 -73285729 - L2 LINE L2 -1096 2218 2113 * 575 226 102 0 chr17 16218821 16218998 -73285555 + L2 LINE L2 2557 2751 -563 1382 226 129 0 chr17 16219002 16219351 -73285202 + L1MB7 LINE L1 5774 6167 -17 3037 129 179 78 chr17 16219351 16219640 -73284913 - MER44D DNA MER2_type -1883 604 346 2077 102 3 3 chr17 16219640 16219933 -73284620 - AluSc SINE Alu 0 309 17 3037 129 179 78 chr17 16219933 16220308 -73284245 - MER44D DNA MER2_type -2141 346 1 854 306 66 39 chr17 16220318 16220874 -73283679 + L2 LINE L2 2734 3300 -13 332 244 8 107 chr17 16220887 16221018 -73283535 + L1ME4a LINE L1 6003 6120 -1 1497 108 0 13 chr17 16221999 16222231 -73282322 - AluY SINE Alu 0 311 83 673 190 0 8 chr17 16222280 16222401 -73282152 - FLAM_C SINE Alu -22 121 2 264 370 110 32 chr17 16222584 16222738 -73281815 + MIR3 SINE MIR 22 187 -21 2337 82 0 0 chr17 16222807 16223112 -73281441 - AluSc SINE Alu -4 305 1 204 349 104 9 chr17 16224091 16224197 -73280356 + MIR SINE MIR 31 146 -62 1402 167 112 65 chr17 16224561 16224944 -73279609 - MER57A LTR ERV1 -2 401 1 301 281 24 0 chr17 16225070 16225152 -73279401 + MIR SINE MIR 72 155 -107 459 52 0 0 chr17 16225222 16225280 -73279273 + (CAT)n Simple_repeat Simple_repeat 1 58 0 506 169 17 59 chr17 16226313 16226431 -73278122 + MLT1A1 LTR MaLR 65 177 -188 380 226 129 0 chr17 16226866 16226959 -73277594 + MLT1A1 LTR MaLR 270 374 0 2203 60 46 0 chr17 16227082 16227366 -73277187 + AluY SINE Alu 15 311 0 985 192 27 49 chr17 16227740 16227964 -73276589 + MER20 DNA MER1_type 1 219 0 1713 191 97 0 chr17 16228691 16229031 -73275522 + MER93b LTR ERV1 1 373 0 414 355 53 12 chr17 16230373 16230542 -73274011 - MIR3 SINE MIR -1 207 32 261 75 0 0 chr17 16230573 16230613 -73273940 + (A)n Simple_repeat Simple_repeat 1 40 0 234 192 0 0 chr17 16230874 16230926 -73273627 + (TA)n Simple_repeat Simple_repeat 1 52 0 24 0 0 0 chr17 16230977 16231001 -73273552 + AT_rich Low_complexity Low_complexity 1 24 0 1078 267 101 33 chr17 16231027 16231424 -73273129 - MLT1J2 LTR MaLR -26 424 1 825 246 56 20 chr17 16231600 16231852 -73272701 - MIR SINE MIR 0 262 2 214 286 200 0 chr17 16232575 16232680 -73271873 + MIR SINE MIR 15 140 -122 2160 106 7 10 chr17 16233073 16233376 -73271177 - AluSg SINE Alu -8 302 1 275 242 106 83 chr17 16233589 16233721 -73270832 - MIR SINE MIR -119 143 9 2142 98 7 3 chr17 16233978 16234275 -73270278 - AluSg SINE Alu -12 298 1 210 240 20 0 chr17 16234481 16234531 -73270022 - L3 LINE CR1 -627 950 900 599 87 47 8 chr17 16235690 16235817 -73268736 + CT-rich Low_complexity Low_complexity 1 132 0 1570 143 17 34 chr17 16236105 16236399 -73268154 + AluJo SINE Alu 1 289 -23 1333 168 111 8 chr17 16237554 16237816 -73266737 - AluJb SINE Alu -19 293 5 358 294 28 9 chr17 16238357 16238466 -73266087 + MIR SINE MIR 2 112 -150 4526 155 72 32 chr17 16238498 16239519 -73265034 + pTR5 LTR ERV1 741 2019 -419 317 245 31 20 chr17 16239525 16239623 -73264930 + LTR30 LTR ERV1 544 642 -80 1595 89 9 0 chr17 16239624 16239838 -73264715 + LTR12 LTR ERV1 480 695 -19 2458 46 0 3 chr17 16240542 16240844 -73263709 + AluY SINE Alu 1 301 -10 515 262 47 0 chr17 16240870 16241019 -73263534 + MIR SINE MIR 105 260 -2 248 226 96 9 chr17 16241951 16242066 -73262487 + Charlie7 DNA MER1_type 2440 2564 -48 844 191 0 0 chr17 16242566 16242702 -73261851 + FRAM SINE Alu 1 136 -40 410 326 73 54 chr17 16242716 16242898 -73261655 + L2 LINE L2 2992 3182 -90 490 229 69 51 chr17 16242898 16243073 -73261480 - MER104 DNA MER2_type -2 178 1 410 326 73 54 chr17 16243073 16243151 -73261402 + L2 LINE L2 3182 3257 -15 1534 120 31 0 chr17 16243263 16243522 -73261031 + L1P4 LINE L1 5281 5547 -619 2217 100 10 0 chr17 16243762 16244062 -73260491 + AluSg SINE Alu 1 303 -7 806 201 19 6 chr17 16244964 16245123 -73259430 - MER5A DNA MER1_type -28 161 1 328 318 3 23 chr17 16245901 16246019 -73258534 + MIR3 SINE MIR 71 188 -20 247 111 0 0 chr17 16247216 16247252 -73257301 - MLT1B LTR MaLR -22 368 333 298 277 104 73 chr17 16248089 16248378 -73256175 + LTR16A1 LTR ERVL 160 457 0 2331 137 65 2 chr17 16248783 16249186 -73255367 + MSTA LTR MaLR 1 428 0 2254 145 13 16 chr17 16249331 16249717 -73254836 - MLT1B LTR MaLR -3 387 3 217 254 0 36 chr17 16250272 16250327 -73254226 + L2 LINE L2 3201 3253 -19 773 298 57 20 chr17 16250374 16250619 -73253934 + MIR SINE MIR 9 262 0 337 392 38 0 chr17 16250628 16250837 -73253716 - MIR SINE MIR -41 221 5 2118 110 0 13 chr17 16250870 16251178 -73253375 + AluSc SINE Alu 1 304 -5 365 217 33 158 chr17 16251576 16251760 -73252793 + MER117 DNA MER1_type 3 163 -34 1630 156 84 39 chr17 16251810 16252169 -73252384 + THE1C LTR MaLR 1 375 0 864 189 6 6 chr17 16252295 16252464 -73252089 + AluJo SINE Alu 121 289 -23 243 0 0 0 chr17 16252467 16252494 -73252059 + (CA)n Simple_repeat Simple_repeat 2 28 0 2147 83 28 0 chr17 16252614 16252904 -73251649 + AluY SINE Alu 1 298 -13 947 316 82 14 chr17 16252962 16253376 -73251177 - L3 LINE CR1 -6 1571 1130 712 329 63 4 chr17 16253383 16253638 -73250915 - L1MEc LINE L1 -6091 305 36 538 280 66 18 chr17 16253662 16254198 -73250355 + L1M4 LINE L1 4027 4649 -1497 2121 101 3 3 chr17 16254208 16254504 -73250049 + AluY SINE Alu 1 296 -15 290 316 11 0 chr17 16254504 16254678 -73249875 + L1M4 LINE L1 4740 4915 -1231 580 295 41 37 chr17 16254733 16255028 -73249525 - MLT1I LTR MaLR -23 386 91 268 290 117 6 chr17 16255130 16255292 -73249261 + L1M4 LINE L1 4962 5141 -1005 383 338 18 5 chr17 16255407 16255629 -73248924 + L1M4 LINE L1 4824 5048 -1098 1061 125 6 0 chr17 16255746 16255906 -73248647 + AluSx SINE Alu 1 161 -151 1968 106 20 3 chr17 16255998 16256290 -73248263 - AluSx SINE Alu -15 297 1 2218 86 13 0 chr17 16256290 16256593 -73247960 - AluSx SINE Alu -5 307 1 2465 47 7 0 chr17 16256599 16256898 -73247655 - AluY SINE Alu -10 301 1 250 297 0 0 chr17 16256985 16257049 -73247504 - L2 LINE L2 -347 2925 2862 414 0 0 0 chr17 16257049 16257095 -73247458 + (TG)n Simple_repeat Simple_repeat 2 47 0 21 0 0 0 chr17 16257235 16257256 -73247297 + AT_rich Low_complexity Low_complexity 1 21 0 356 343 9 0 chr17 16258184 16258289 -73246264 - L2 LINE L2 -11 3302 3197 1842 179 23 20 chr17 16258303 16258650 -73245903 + MLT2C1 LTR ERVL 1 348 -49 201 74 0 0 chr17 16258651 16258678 -73245875 + (TG)n Simple_repeat Simple_repeat 1 27 0 524 280 45 25 chr17 16258795 16258952 -73245601 + MIR SINE MIR 37 196 -66 247 293 101 10 chr17 16258969 16259068 -73245485 - MIR SINE MIR -150 112 5 313 305 23 0 chr17 16259315 16259418 -73245135 + MIR SINE MIR 55 160 -48 1548 130 59 6 chr17 16259915 16260225 -73244328 + LTR54 LTR ERV1 1 376 -134 247 152 152 30 chr17 16260252 16260318 -73244235 + MER57A LTR ERV1 330 403 0 376 216 0 78 chr17 16260524 16260626 -73243927 - MIR SINE MIR -15 247 154 2805 221 26 12 chr17 16260983 16261595 -73242958 - L1M4 LINE L1 -2887 3757 3132 2034 115 31 0 chr17 16261595 16261882 -73242671 - AluSx SINE Alu -15 297 2 2805 221 26 12 chr17 16261882 16261998 -73242555 - L1M4 LINE L1 -3512 3132 3019 226 316 13 0 chr17 16262047 16262126 -73242427 - MIR SINE MIR 0 262 183 2190 113 0 0 chr17 16262156 16262448 -73242105 + AluSx SINE Alu 2 293 -19 4660 225 103 31 chr17 16262482 16262781 -73241772 - L1M4 LINE L1 -3642 3002 2726 2191 102 10 10 chr17 16262781 16263084 -73241469 - AluSx SINE Alu -9 303 1 4660 225 103 31 chr17 16263084 16263744 -73240809 - L1M4 LINE L1 -3918 2726 2115 1750 154 46 4 chr17 16263744 16264024 -73240529 - AluJb SINE Alu -16 296 5 4660 225 103 31 chr17 16264024 16265710 -73238843 - L1M4 LINE L1 -4529 2115 14 1113 251 84 38 chr17 16266052 16266502 -73238051 - MER20B DNA MER1_type -1 782 312 1847 253 49 19 chr17 16266560 16267090 -73237463 - MER90 LTR ERV1 0 614 69 434 269 42 17 chr17 16267121 16267240 -73237313 - MER20B DNA MER1_type -542 241 120 298 200 80 40 chr17 16267242 16267317 -73237236 - MLT1J2 LTR MaLR -306 144 67 243 237 99 84 chr17 16267351 16267482 -73237071 + MIR SINE MIR 75 207 -55 306 0 0 0 chr17 16267564 16267598 -73236955 + (CA)n Simple_repeat Simple_repeat 2 35 0 2230 113 3 0 chr17 16267672 16267972 -73236581 + AluSp SINE Alu 1 301 -12 1410 247 70 15 chr17 16268107 16268511 -73236042 + MLT1G1 LTR MaLR 1 354 -176 435 219 86 0 chr17 16268507 16268612 -73235941 + MLT1G1 LTR MaLR 465 578 -12 * 1043 277 126 52 chr17 16268789 16268896 -73235657 - MLT1J LTR MaLR 0 511 413 2123 123 7 3 chr17 16268896 16269188 -73235365 + AluSq SINE Alu 2 294 -19 1043 277 126 52 chr17 16269188 16269556 -73234997 - MLT1J LTR MaLR -98 413 1 2440 79 0 3 chr17 16271294 16271599 -73232954 + AluY SINE Alu 1 304 -7 301 349 9 28 chr17 16271949 16272058 -73232495 + MIR3 SINE MIR 15 121 -87 839 225 56 11 chr17 16272058 16272236 -73232317 + MER5A DNA MER1_type 4 189 0 2504 37 14 0 chr17 16272311 16272606 -73231947 + AluY SINE Alu 1 299 -12 2271 110 0 0 chr17 16272797 16273096 -73231457 + AluY SINE Alu 1 299 -12 410 156 0 52 chr17 16273747 16273824 -73230729 - L2 LINE L2 -2 3270 3198 1220 184 82 0 chr17 16274279 16274486 -73230067 - MER58A DNA MER1_type 0 224 1 2428 72 3 3 chr17 16275452 16275756 -73228797 - AluY SINE Alu -2 309 6 1156 72 0 0 chr17 16275766 16275905 -73228648 + MER85 DNA T2_type 1 139 0 253 290 172 32 chr17 16276572 16276793 -73227760 + L2 LINE L2 3038 3289 -24 332 280 88 29 chr17 16276801 16277040 -73227513 + HAL1b LINE L1 62 314 -1034 533 248 78 0 chr17 16277095 16277248 -73227305 + HAL1b LINE L1 401 565 -783 379 258 69 73 chr17 16277279 16277512 -73227041 + HAL1b LINE L1 666 897 -451 826 231 152 18 chr17 16278022 16278520 -73226033 + MLT1F LTR MaLR 2 542 0 401 321 179 4 chr17 16280609 16280871 -73223682 - L2 LINE L2 -1 3312 3005 829 185 55 120 chr17 16280891 16281140 -73223413 + Charlie4 DNA MER1_type 1 230 -1731 2306 103 7 0 chr17 16281140 16281450 -73223103 - AluSp SINE Alu -1 312 1 829 185 55 120 chr17 16281450 16281492 -73223061 + Charlie4 DNA MER1_type 230 273 -1688 * 1338 176 125 27 chr17 16281489 16281699 -73222854 + Charlie4a DNA MER1_type 104 292 -1669 1627 140 110 16 chr17 16281699 16282007 -73222546 - MER44D DNA MER2_type -1 608 2 1338 176 125 27 chr17 16282007 16282165 -73222388 + Charlie4a DNA MER1_type 292 508 0 249 326 90 28 chr17 16282256 16282434 -73222119 - L2 LINE L2 -801 2513 2325 1500 154 0 5 chr17 16282458 16282679 -73221874 + AluSg/x SINE Alu 77 296 -16 271 373 51 28 chr17 16282681 16282936 -73221617 - L2 LINE L2 -978 2336 2076 392 313 130 28 chr17 16282995 16283458 -73221095 - L1M4 LINE L1 -2966 3180 2671 2040 71 67 32 chr17 16284108 16284391 -73220162 - AluY SINE Alu -18 293 1 1603 73 60 18 chr17 16284554 16284772 -73219781 - MER30 DNA MER1_type 0 230 4 2392 81 0 7 chr17 16285385 16285683 -73218870 + AluSp SINE Alu 1 296 -17 194 156 22 0 chr17 16285901 16285946 -73218607 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 1185 198 9 22 chr17 16286000 16286222 -73218331 - MER20 DNA MER1_type 0 219 1 27 0 0 0 chr17 16286630 16286657 -73217896 + AT_rich Low_complexity Low_complexity 1 27 0 2557 71 0 0 chr17 16287214 16287522 -73217031 - AluY SINE Alu -3 308 1 1793 150 14 10 chr17 16287531 16287824 -73216729 - L1MB8 LINE L1 0 6178 5885 207 307 21 118 chr17 16288763 16288902 -73215651 + L2 LINE L2 1516 1616 -1698 2236 113 3 0 chr17 16288902 16289202 -73215351 - AluSx SINE Alu -11 301 1 207 307 21 118 chr17 16289202 16289342 -73215211 + L2 LINE L2 1616 1768 -1546 2036 103 31 7 chr17 16289349 16289639 -73214914 - AluY SINE Alu -14 297 1 339 350 92 25 chr17 16289734 16290060 -73214493 + L2 LINE L2 2628 2975 -339 1948 143 0 26 chr17 16290276 16290584 -73213969 - AluSx SINE Alu -12 300 1 356 236 8 134 chr17 16290985 16291112 -73213441 - MER5B DNA MER1_type -1 177 67 335 272 134 18 chr17 16291169 16291362 -73213191 + L2 LINE L2 2644 2866 -406 1506 208 84 45 chr17 16291362 16291789 -73212764 + MLT1D LTR MaLR 1 444 -61 289 274 8 94 chr17 16291833 16291852 -73212701 + L2 LINE L2 2871 2890 -423 1235 175 156 0 chr17 16291852 16292109 -73212444 - AluJo SINE Alu -13 299 3 289 274 8 94 chr17 16292109 16292206 -73212347 + L2 LINE L2 2890 2977 -336 370 237 36 45 chr17 16292234 16292428 -73212125 - L2 LINE L2 -2 3311 2337 1018 230 35 83 chr17 16292469 16292817 -73211736 - L2 LINE L2 -552 2762 2432 2296 271 115 38 chr17 16292818 16293046 -73211507 - L2 LINE L2 -1154 2160 1951 2273 83 3 20 chr17 16293046 16293348 -73211205 - AluSc SINE Alu -12 297 1 2296 271 115 38 chr17 16293348 16293540 -73211013 - L2 LINE L2 -1363 1951 1775 2306 67 37 0 chr17 16293540 16293839 -73210714 - AluY SINE Alu -1 310 1 2296 271 115 38 chr17 16293839 16294302 -73210251 - L2 LINE L2 -1539 1775 1349 2289 85 0 0 chr17 16294302 16294652 -73209901 + AluSq SINE Alu 1 350 0 2296 271 115 38 chr17 16294652 16294713 -73209840 - L2 LINE L2 -1965 1349 1294 3952 96 35 11 chr17 16294713 16295207 -73209346 + MER41A LTR ERV1 1 511 -43 2223 78 14 14 chr17 16295207 16295502 -73209051 - AluSc SINE Alu -14 295 1 3952 96 35 11 chr17 16295502 16295548 -73209005 + MER41A LTR ERV1 511 554 0 2296 271 115 38 chr17 16295548 16295564 -73208989 - L2 LINE L2 -2020 1294 1122 310 265 20 20 chr17 16295766 16295868 -73208685 + L2 LINE L2 3211 3312 -1 435 181 0 0 chr17 16296588 16296704 -73207849 + (CGGGG)n Simple_repeat Simple_repeat 4 119 0 22 56 0 0 chr17 16296886 16296922 -73207631 + AT_rich Low_complexity Low_complexity 1 36 0 212 242 81 0 chr17 16297150 16297212 -73207341 + MIR SINE MIR 106 172 -90 963 131 7 0 chr17 16297731 16297868 -73206685 - AluSq/x SINE Alu -174 138 1 2479 64 0 13 chr17 16299537 16299849 -73204704 - AluY SINE Alu -3 308 1 2386 70 0 3 chr17 16299975 16300273 -73204280 + AluY SINE Alu 1 297 -14 325 257 47 27 chr17 16300388 16300536 -73204017 - L1MC4a LINE L1 -1925 5883 5733 813 171 0 0 chr17 16300570 16300693 -73203860 + FRAM SINE Alu 38 160 -16 394 337 57 50 chr17 16301209 16301488 -73203065 - L2 LINE L2 -5 3267 2987 2324 132 21 13 chr17 16302047 16302425 -73202128 - L1P5 LINE L1 -424 5732 5352 1427 187 99 0 chr17 16302436 16302720 -73201833 - AluJb SINE Alu 0 312 1 910 122 0 0 chr17 16302727 16302850 -73201703 - FLAM_C SINE Alu -10 133 11 562 126 41 84 chr17 16302851 16302992 -73201561 - L1 LINE L1 -780 5366 5232 289 185 19 0 chr17 16303016 16303070 -73201483 - L2 LINE L2 -68 3245 3191 180 111 0 0 chr17 16303103 16303130 -73201423 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 792 237 58 10 chr17 16303552 16303759 -73200794 + L1ME1 LINE L1 4112 4328 -1818 3118 206 76 44 chr17 16303806 16304049 -73200504 + L1ME1 LINE L1 5073 5307 -859 1760 164 20 10 chr17 16304049 16304342 -73200211 + AluJo SINE Alu 1 296 -16 3118 206 76 44 chr17 16304342 16305143 -73199410 + L1ME1 LINE L1 5307 6151 -15 521 272 58 29 chr17 16305190 16305363 -73199190 + MIR SINE MIR 6 183 -79 301 331 206 26 chr17 16305438 16306017 -73198536 - L2 LINE L2 -24 3248 2561 186 317 195 0 chr17 16308322 16308486 -73196067 + L2 LINE L2 1599 1794 -1520 180 164 18 91 chr17 16309387 16309442 -73195111 + L2 LINE L2 3222 3272 0 256 296 20 51 chr17 16310974 16311072 -73193481 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 16311986 16312007 -73192546 + AT_rich Low_complexity Low_complexity 1 21 0 427 181 14 0 chr17 16312031 16312103 -73192450 + 7SLRNA srpRNA srpRNA 12 84 -236 243 0 0 0 chr17 16312132 16312159 -73192394 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr17 16312257 16312285 -73192268 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 16313479 16313514 -73191039 + AT_rich Low_complexity Low_complexity 1 35 0 284 279 225 0 chr17 16313704 16313833 -73190720 + L2 LINE L2 3115 3272 0 524 219 110 55 chr17 16313845 16314009 -73190544 - MIR SINE MIR -28 234 62 402 293 9 17 chr17 16314099 16314215 -73190338 - MIR SINE MIR -69 139 25 352 103 138 0 chr17 16314748 16314806 -73189747 - MER5A DNA MER1_type -120 69 4 21 82 0 0 chr17 16314997 16315046 -73189507 + AT_rich Low_complexity Low_complexity 1 49 0 509 304 129 32 chr17 16316004 16316502 -73188051 + L2 LINE L2 2652 3205 -67 210 170 71 40 chr17 16316761 16316834 -73187719 + MIR SINE MIR 96 146 -62 975 279 33 42 chr17 16316924 16317382 -73187171 + L1ME4a LINE L1 5486 5939 -182 189 107 0 0 chr17 16317945 16317973 -73186580 + (T)n Simple_repeat Simple_repeat 1 28 0 8648 100 21 25 chr17 16318276 16319581 -73184972 - HSMAR2 DNA Mariner -1 1301 1 233 271 258 19 chr17 16321459 16321614 -73182939 - MIR SINE MIR -63 199 8 551 297 83 18 chr17 16323021 16323250 -73181303 + MIR SINE MIR 2 245 -17 2054 106 7 0 chr17 16324280 16324573 -73179980 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 16324678 16324706 -73179847 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 216 0 0 0 chr17 16325281 16325305 -73179248 + (T)n Simple_repeat Simple_repeat 1 24 0 2169 89 0 3 chr17 16325808 16326101 -73178452 + AluSg1 SINE Alu 1 292 -17 2013 136 0 0 chr17 16326613 16326914 -73177639 - AluSq SINE Alu -12 301 1 2318 81 3 0 chr17 16327176 16327473 -73177080 + AluY SINE Alu 1 298 -13 2202 107 0 0 chr17 16328045 16328354 -73176199 + AluSc SINE Alu 1 309 0 1637 101 8 36 chr17 16328923 16329171 -73175382 - AluSq SINE Alu -72 241 1 2121 98 0 23 chr17 16330332 16330639 -73173914 + AluSc SINE Alu 2 301 -8 820 210 6 12 chr17 16330836 16330998 -73173555 - MIR SINE MIR -95 167 7 184 309 88 0 chr17 16331077 16331145 -73173408 + MIR SINE MIR 166 239 -23 238 338 0 0 chr17 16331280 16331348 -73173205 + L2 LINE L2 3205 3272 0 303 150 0 0 chr17 16331349 16331409 -73173144 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 611 229 37 107 chr17 16331756 16331880 -73172673 + MIR SINE MIR 34 165 -97 2172 115 0 0 chr17 16331880 16332176 -73172377 + AluSc SINE Alu 1 296 -13 611 229 37 107 chr17 16332176 16332223 -73172330 + MIR SINE MIR 165 186 -76 1171 184 14 5 chr17 16332223 16332440 -73172113 + MER20 DNA MER1_type 1 219 0 611 229 37 107 chr17 16332440 16332511 -73172042 + MIR SINE MIR 186 260 -2 195 175 113 50 chr17 16332638 16332718 -73171835 + L3 LINE CR1 382 466 -1111 721 232 16 54 chr17 16332768 16332920 -73171633 + MIR SINE MIR 8 153 -109 2462 50 0 0 chr17 16332920 16333217 -73171336 + AluY SINE Alu 1 297 -14 721 232 16 54 chr17 16333217 16333249 -73171304 + MIR SINE MIR 153 185 -77 961 281 100 75 chr17 16333498 16333753 -73170800 + L1ME4a LINE L1 3947 4194 -1952 2201 86 3 13 chr17 16333753 16334056 -73170497 + AluSc SINE Alu 1 300 -9 961 281 100 75 chr17 16334056 16334113 -73170440 + L1ME4a LINE L1 4194 4248 -1898 2503 61 0 0 chr17 16334113 16334424 -73170129 + AluY SINE Alu 1 311 0 961 281 100 75 chr17 16334424 16334816 -73169737 + L1ME4a LINE L1 4248 4629 -1517 2361 73 0 0 chr17 16334816 16335118 -73169435 + AluY SINE Alu 1 302 -9 961 281 100 75 chr17 16335118 16335510 -73169043 + L1ME4a LINE L1 4629 5072 -1074 2503 23 7 3 chr17 16335610 16335911 -73168642 - AluY SINE Alu -8 303 2 1765 85 101 4 chr17 16335911 16336169 -73168384 - AluSp SINE Alu -30 283 1 935 196 20 20 chr17 16336238 16336437 -73168116 + MLT2D LTR ERVL 216 414 0 1079 296 68 43 chr17 16336437 16336776 -73167777 + L1ME4a LINE L1 5380 5740 -430 2107 91 0 26 chr17 16336776 16337083 -73167470 + AluY SINE Alu 1 299 -12 1079 296 68 43 chr17 16337083 16337301 -73167252 + L1ME4a LINE L1 5740 5951 -219 2311 55 0 10 chr17 16337531 16337822 -73166731 - AluY SINE Alu -23 288 1 273 284 0 0 chr17 16338664 16338731 -73165822 + MER103 DNA DNA 98 164 -2 278 217 17 0 chr17 16338993 16339053 -73165500 + MER94 DNA DNA 2 62 -72 809 204 0 0 chr17 16339053 16339210 -73165343 - FRAM SINE Alu -16 160 4 1174 177 5 9 chr17 16339302 16339522 -73165031 + AluSg/x SINE Alu 74 292 -20 349 284 52 43 chr17 16339573 16339689 -73164864 - L1MC4 LINE L1 -1340 6702 6586 318 310 46 23 chr17 16340101 16340275 -73164278 + L1ME4a LINE L1 5944 6121 0 2301 81 0 3 chr17 16341148 16341445 -73163108 - AluSc SINE Alu -13 296 1 2094 114 0 0 chr17 16341449 16341739 -73162814 - AluSq SINE Alu -23 290 1 211 313 9 98 chr17 16341777 16341889 -73162664 - MIR SINE MIR -60 148 90 184 183 0 42 chr17 16341921 16341992 -73162561 + CT-rich Low_complexity Low_complexity 4 71 0 361 307 58 6 chr17 16342497 16342662 -73161891 + MIR SINE MIR 32 208 -54 2237 104 0 13 chr17 16342831 16343147 -73161406 - AluSx SINE Alu 0 312 1 3619 106 66 2 chr17 16343166 16343711 -73160842 - LTR19B LTR ERV1 0 580 1 300 130 8 4 chr17 16343906 16343960 -73160593 + MIR SINE MIR 103 158 -50 2290 86 3 0 chr17 16344004 16344307 -73160246 - AluY SINE Alu -7 304 1 720 241 37 87 chr17 16344310 16344609 -73159944 + MER102a DNA MER1_type 33 316 -14 2257 56 0 33 chr17 16345211 16345515 -73159038 + AluY SINE Alu 1 294 -17 191 88 29 0 chr17 16345813 16345847 -73158706 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2350 44 0 20 chr17 16347183 16347479 -73157074 - AluY SINE Alu -21 290 1 402 258 11 86 chr17 16347559 16347745 -73156808 + L1MC5 LINE L1 7742 7913 -48 191 293 93 27 chr17 16348087 16348213 -73156340 + MIR SINE MIR 23 256 -6 2187 68 37 3 chr17 16348303 16348598 -73155955 - AluY SINE Alu -6 305 1 2027 120 16 0 chr17 16349147 16349455 -73155098 - AluSq SINE Alu 0 313 1 2299 72 0 25 chr17 16349508 16349826 -73154727 + AluY SINE Alu 1 310 -1 248 311 25 34 chr17 16350022 16350141 -73154412 + MIR3 SINE MIR 83 200 -8 2236 167 38 40 chr17 16350456 16350882 -73153671 + MSTB1 LTR MaLR 1 425 -7 671 199 58 89 chr17 16350958 16351033 -73153520 + MER5A DNA MER1_type 3 79 -110 2089 85 17 10 chr17 16351033 16351326 -73153227 + AluSg SINE Alu 1 295 -15 671 199 58 89 chr17 16351326 16351441 -73153112 + MER5A DNA MER1_type 79 187 -2 383 228 0 148 chr17 16353179 16353328 -73151225 + MIR SINE MIR 48 174 -88 2181 104 3 0 chr17 16353859 16354166 -73150387 - AluSx SINE Alu -4 308 1 2325 44 10 17 chr17 16354572 16354870 -73149683 + AluY SINE Alu 1 296 -15 266 341 72 30 chr17 16355383 16355550 -73149003 + MIR SINE MIR 20 193 -69 2440 53 0 3 chr17 16355685 16355987 -73148566 + AluY SINE Alu 1 301 -10 1982 94 4 7 chr17 16357385 16357660 -73146893 - AluSg SINE Alu -19 291 18 403 70 0 0 chr17 16357660 16357707 -73146846 - Alu SINE Alu -251 50 1 776 128 8 0 chr17 16357965 16358082 -73146471 - MSTB1 LTR MaLR 0 432 315 756 164 8 8 chr17 16358071 16358199 -73146354 - MSTB1 LTR MaLR -297 129 2 * 939 307 111 51 chr17 16358199 16358465 -73146088 + L3 LINE CR1 156 404 -1173 1941 118 31 0 chr17 16358465 16358753 -73145800 - AluSx SINE Alu -15 297 1 939 307 111 51 chr17 16358753 16358978 -73145575 + L3 LINE CR1 404 694 -883 2386 58 0 0 chr17 16358978 16359270 -73145283 + AluY SINE Alu 1 292 -19 939 307 111 51 chr17 16359270 16359389 -73145164 + L3 LINE CR1 694 804 -773 290 293 155 60 chr17 16359665 16360000 -73144553 + L3 LINE CR1 1128 1494 -83 2310 57 0 0 chr17 16360084 16360398 -73144155 + AluY SINE Alu 1 314 0 744 277 41 67 chr17 16360404 16360436 -73144117 + MIR SINE MIR 2 33 -229 2702 13 0 0 chr17 16360436 16360740 -73143813 + AluY SINE Alu 1 304 -7 744 277 41 67 chr17 16360740 16360974 -73143579 + MIR SINE MIR 33 261 -1 2262 77 0 3 chr17 16361113 16361411 -73143142 + AluSg SINE Alu 1 297 -13 225 108 0 0 chr17 16362448 16362485 -73142068 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 471 318 131 32 chr17 16362645 16363412 -73141141 + L2 LINE L2 2371 3207 -106 1315 155 34 60 chr17 16363542 16363807 -73140746 + AluJb SINE Alu 31 288 -24 794 196 110 0 chr17 16363838 16364001 -73140552 + Tigger2 DNA MER2_type 2528 2708 -10 1449 232 41 6 chr17 16364105 16364446 -73140107 + L1MD3 LINE L1 7633 7985 -10 2109 92 48 0 chr17 16365092 16365385 -73139168 + AluSx SINE Alu 1 307 -5 2150 100 0 7 chr17 16366526 16366825 -73137728 - AluSg SINE Alu -13 297 1 2201 71 0 30 chr17 16366898 16367033 -73137520 + AluSg1 SINE Alu 1 139 -170 2291 77 0 3 chr17 16367033 16367331 -73137222 + AluY SINE Alu 1 297 -14 2369 76 0 3 chr17 16367333 16367647 -73136906 + AluSp SINE Alu 1 313 0 2201 71 0 30 chr17 16367647 16367805 -73136748 + AluSg1 SINE Alu 140 288 -21 247 225 180 0 chr17 16368017 16368128 -73136425 + L1ME4a LINE L1 5990 6120 -1 281 311 11 11 chr17 16368165 16368255 -73136298 - MIR3 SINE MIR -15 193 104 261 332 56 25 chr17 16368634 16368854 -73135699 + L2 LINE L2 2827 3059 -213 279 236 0 42 chr17 16369451 16369523 -73135030 + L3 LINE CR1 1504 1572 -5 6610 66 29 50 chr17 16370018 16371257 -73133296 + SVA Other Other 432 1386 0 1984 71 8 0 chr17 16371276 16371529 -73133024 + AluY SINE Alu 1 255 -56 189 107 0 0 chr17 16371686 16371714 -73132839 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 1532 174 28 0 chr17 16372031 16372313 -73132240 - AluJb SINE Alu -4 308 19 679 239 234 0 chr17 16372949 16373158 -73131395 - MIR SINE MIR -3 259 2 203 88 29 0 chr17 16374733 16374767 -73129786 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 2018 141 0 3 chr17 16374832 16375129 -73129424 - AluSx SINE Alu -16 296 1 3240 118 45 19 chr17 16376095 16376692 -73127861 + MER4B LTR ERV1 1 779 0 511 222 189 0 chr17 16376884 16377037 -73127516 - MER21B LTR ERV1 -1 862 681 * 1793 190 18 70 chr17 16377031 16377169 -73127384 - MER21B LTR ERV1 -423 440 296 2107 109 0 13 chr17 16377169 16377472 -73127081 - AluSx SINE Alu -10 302 4 1793 190 18 70 chr17 16377472 16377775 -73126778 - MER21B LTR ERV1 -567 296 22 2128 116 0 0 chr17 16377780 16378099 -73126454 - AluSg SINE Alu 0 319 1 390 279 19 62 chr17 16378115 16378276 -73126277 + MIR SINE MIR 102 255 -7 180 111 0 0 chr17 16378545 16378572 -73125981 + (A)n Simple_repeat Simple_repeat 1 27 0 195 302 83 52 chr17 16379466 16379562 -73124991 + MIR SINE MIR 37 135 -127 2236 79 7 23 chr17 16379952 16380257 -73124296 - AluSx SINE Alu -12 300 1 321 26 0 0 chr17 16380799 16380837 -73123716 + (CA)n Simple_repeat Simple_repeat 1 38 0 2266 52 0 7 chr17 16380929 16381263 -73123290 + AluY SINE Alu 1 311 0 2053 95 3 0 chr17 16382288 16382571 -73121982 - AluY SINE Alu -27 284 1 207 190 17 35 chr17 16383820 16383878 -73120675 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 2190 79 6 41 chr17 16385122 16385438 -73119115 - AluSg SINE Alu -1 309 5 2154 98 10 0 chr17 16385441 16385746 -73118807 - AluSx SINE Alu -4 308 1 195 237 102 0 chr17 16385850 16385909 -73118644 - L3 LINE CR1 -936 641 577 2304 153 31 26 chr17 16385947 16386364 -73118189 + MSTB1 LTR MaLR 1 419 -13 2038 141 91 16 chr17 16386381 16386744 -73117809 - MLT1B LTR MaLR 0 390 1 3451 80 19 14 chr17 16387421 16387906 -73116647 + LTR15 LTR ERV1 1 487 -6 2380 55 0 0 chr17 16388565 16388855 -73115698 - AluY SINE Alu -17 294 5 379 306 105 15 chr17 16389349 16389692 -73114861 + L2 LINE L2 309 682 -2632 1611 155 7 58 chr17 16389741 16390051 -73114502 - AluJb SINE Alu -18 294 1 266 171 0 0 chr17 16390178 16390219 -73114334 - FAM SINE Alu -13 166 126 1023 181 0 0 chr17 16390220 16390386 -73114167 - FRAM SINE Alu 0 166 1 2019 136 12 6 chr17 16390387 16390710 -73113843 - L1MB3 LINE L1 -41 6142 5818 2557 52 0 0 chr17 16393602 16393911 -73110642 + AluY SINE Alu 1 309 -2 397 250 78 23 chr17 16394057 16394185 -73110368 + MIR SINE MIR 32 166 -96 305 359 0 0 chr17 16395732 16395824 -73108729 - MIR SINE MIR -122 140 49 183 294 64 55 chr17 16396265 16396374 -73108179 - L2 LINE L2 -1 3312 3203 410 313 123 6 chr17 16396456 16396635 -73107918 + MLT1L LTR MaLR 363 562 -53 593 114 0 0 chr17 16397409 16397488 -73107065 + AluS SINE Alu 5 83 -229 2177 103 10 0 chr17 16397738 16398039 -73106514 + AluSx SINE Alu 1 304 -8 2164 104 10 0 chr17 16398216 16398524 -73106029 + AluY SINE Alu 1 311 0 1177 324 77 26 chr17 16398571 16399222 -73105331 + L2 LINE L2 2019 2702 -612 811 178 0 0 chr17 16399234 16399363 -73105190 - FLAM_C SINE Alu 0 133 5 378 259 24 41 chr17 16399378 16399398 -73105155 - L1MA10 LINE L1 -2 6332 6313 1841 221 14 18 chr17 16399398 16399838 -73104715 - L1ME2 LINE L1 -9 6155 5718 369 248 41 25 chr17 16399838 16399959 -73104594 - L1MEc LINE L1 -3846 2369 2247 1801 215 87 34 chr17 16400081 16400528 -73104025 + Charlie1a DNA MER1_type 1 471 -984 712 150 39 20 chr17 16400770 16400923 -73103630 - L1MC3 LINE L1 -97 7688 7533 977 292 23 9 chr17 16401046 16401388 -73103165 - L1MEc LINE L1 -6014 382 36 475 306 126 22 chr17 16401403 16401625 -73102928 + L2 LINE L2 2702 2946 -368 233 231 50 88 chr17 16401888 16402048 -73102505 + L1MC4a LINE L1 5254 5407 -927 32 0 0 0 chr17 16402053 16402085 -73102468 + AT_rich Low_complexity Low_complexity 1 32 0 284 203 159 0 chr17 16402088 16402157 -73102396 + L1MC4a LINE L1 5482 5561 -560 345 295 185 7 chr17 16402158 16402439 -73102114 + L1MC4a LINE L1 5585 5915 -1893 1225 165 9 5 chr17 16402763 16402975 -73101578 - MER20 DNA MER1_type -5 214 2 279 360 40 0 chr17 16403536 16403636 -73100917 + MIR3 SINE MIR 94 197 -11 1508 172 18 14 chr17 16405438 16405738 -73098815 + AluJo SINE Alu 2 302 0 2340 72 0 0 chr17 16407075 16407366 -73097187 + AluSc SINE Alu 1 291 -18 641 224 116 88 chr17 16407427 16407780 -73096773 + LTR52 LTR ERVL 1 363 -58 310 351 63 0 chr17 16408744 16408855 -73095698 - L1MC4 LINE L1 -1339 6703 6586 612 281 59 95 chr17 16408890 16409079 -73095474 + L2 LINE L2 2138 2332 -982 937 156 177 0 chr17 16409079 16409265 -73095288 - MER20 DNA MER1_type 0 219 1 612 281 59 95 chr17 16409265 16409410 -73095143 + L2 LINE L2 2332 2455 -859 2429 68 0 3 chr17 16409410 16409720 -73094833 - AluY SINE Alu -2 309 1 612 281 59 95 chr17 16409720 16409825 -73094728 + L2 LINE L2 2455 2562 -752 2366 70 0 7 chr17 16410921 16411222 -73093331 + AluY SINE Alu 1 299 -12 1037 233 137 32 chr17 16411337 16411710 -73092843 + MLT1J1 LTR MaLR 15 426 -20 1991 100 20 23 chr17 16411864 16412164 -73092389 - AluSx SINE Alu -13 299 1 2662 45 0 0 chr17 16412641 16412949 -73091604 + AluY SINE Alu 1 308 -3 225 286 29 14 chr17 16414229 16414299 -73090254 - MIR3 SINE MIR -17 191 121 342 193 80 23 chr17 16414472 16414560 -73089993 + L2 LINE L2 3180 3272 0 508 261 182 20 chr17 16414942 16415145 -73089408 + MIR SINE MIR 22 257 -5 242 296 141 3 chr17 16416417 16416544 -73088009 + MIR3 SINE MIR 4 144 -78 405 247 69 23 chr17 16416563 16416737 -73087816 - MIR SINE MIR 0 262 81 283 216 62 21 chr17 16417291 16417388 -73087165 + AluYb8 SINE Alu 208 308 0 2247 77 7 14 chr17 16417427 16417724 -73086829 - AluSx SINE Alu -17 295 1 5359 232 36 28 chr17 16417724 16417964 -73086589 - L1M2c LINE L1 -4824 1965 1728 2340 67 0 54 chr17 16417964 16418278 -73086275 - AluY SINE Alu -14 297 1 5359 232 36 28 chr17 16418278 16418383 -73086170 - L1M2c LINE L1 -5061 1728 1625 559 13 26 13 chr17 16418383 16418459 -73086094 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 1874 125 18 14 chr17 16418460 16418739 -73085814 - AluSx SINE Alu -32 280 1 5359 232 36 28 chr17 16418739 16418931 -73085622 - L1M2c LINE L1 -5164 1625 1436 2119 124 0 0 chr17 16418931 16419221 -73085332 + AluSg SINE Alu 1 290 -20 5359 232 36 28 chr17 16419221 16420934 -73083619 - L1M2c LINE L1 -5353 1436 14 775 309 121 62 chr17 16421001 16421157 -73083396 - L1MDa LINE L1 -2196 4344 4199 2320 102 7 0 chr17 16421157 16421461 -73083092 + AluSx SINE Alu 1 306 -6 775 309 121 62 chr17 16421461 16421472 -73083081 - L1MDa LINE L1 -2341 4199 4190 2239 94 0 29 chr17 16421472 16421779 -73082774 + AluY SINE Alu 1 298 -13 2042 52 135 0 chr17 16421781 16422048 -73082505 + AluY SINE Alu 1 303 -8 775 309 121 62 chr17 16422048 16422591 -73081962 - L1MDa LINE L1 -2350 4190 3540 2189 114 0 0 chr17 16422591 16422872 -73081681 - AluSx SINE Alu -31 281 1 775 309 121 62 chr17 16422872 16423256 -73081297 - L1MDa LINE L1 -3000 3540 3180 1147 181 48 48 chr17 16423262 16423522 -73081031 + MER33 DNA MER1_type 1 263 -2322 2541 50 0 3 chr17 16423522 16423824 -73080729 + AluY SINE Alu 1 301 -10 1147 181 48 48 chr17 16423824 16423873 -73080680 + MER33 DNA MER1_type 262 310 -14 273 290 43 38 chr17 16423930 16424154 -73080399 - L1MDa LINE L1 -3404 3136 2911 3465 219 74 56 chr17 16424206 16426126 -73078427 + L1MDb LINE L1 16 2004 -4402 2365 98 0 0 chr17 16426169 16426464 -73078089 - AluSg SINE Alu -15 295 1 23 0 0 0 chr17 16426464 16426487 -73078066 + AT_rich Low_complexity Low_complexity 1 23 0 2425 87 0 0 chr17 16426630 16426930 -73077623 - AluSc SINE Alu -9 300 1 321 239 68 68 chr17 16426941 16427104 -73077449 - L1MDa LINE L1 -3937 2603 2441 2206 115 10 0 chr17 16427141 16427445 -73077108 - AluSx SINE Alu -5 307 1 2542 84 0 0 chr17 16427618 16427929 -73076624 - AluSx SINE Alu -1 311 1 2068 109 0 82 chr17 16427929 16428106 -73076447 - AluSx SINE Alu -16 296 154 2200 119 13 13 chr17 16428106 16428418 -73076135 - AluSx SINE Alu 0 312 1 2068 109 0 82 chr17 16428418 16428561 -73075992 - AluSx SINE Alu -158 154 1 4271 134 54 0 chr17 16428562 16429226 -73075327 + L1MA4A LINE L1 5594 6293 -10 190 304 0 0 chr17 16429269 16429325 -73075228 - L2 LINE L2 0 3313 3258 2555 56 3 0 chr17 16430033 16430335 -73074218 - AluY SINE Alu -8 303 1 356 313 154 5 chr17 16430491 16430699 -73073854 - HAL1 LINE L1 -1013 1494 1256 1389 240 105 12 chr17 16431163 16431649 -73072904 - MLT1E LTR MaLR -3 590 21 519 338 84 26 chr17 16431695 16432038 -73072515 - L2 LINE L2 -561 2753 2391 260 264 83 58 chr17 16433721 16433842 -73070711 - MER5A DNA MER1_type -22 167 44 2085 131 3 0 chr17 16434826 16435124 -73069429 + AluY SINE Alu 1 299 -12 2258 101 13 0 chr17 16435218 16435516 -73069037 + AluSx SINE Alu 1 302 -10 537 299 118 88 chr17 16435722 16436247 -73068306 - MLT1K LTR MaLR -2 586 46 28 0 0 0 chr17 16437037 16437065 -73067488 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr17 16437890 16437923 -73066630 + GC_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 16437940 16437962 -73066591 + GC_rich Low_complexity Low_complexity 1 22 0 611 233 55 25 chr17 16438125 16438327 -73066226 - L1MC4a LINE L1 -2 7806 7599 337 277 153 36 chr17 16438330 16438604 -73065949 - L1M4 LINE L1 -2997 3149 2844 314 339 62 0 chr17 16438871 16439001 -73065552 - HAL1b LINE L1 -620 728 591 256 136 51 51 chr17 16439671 16439730 -73064823 - MLT1K LTR MaLR -8 580 522 603 270 176 30 chr17 16439800 16440033 -73064520 - MLT1K LTR MaLR -176 412 146 2440 56 20 7 chr17 16440144 16440446 -73064107 + AluY SINE Alu 1 306 -5 901 133 0 22 chr17 16440855 16440990 -73063563 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 16440993 16441018 -73063535 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr17 16441325 16441349 -73063204 + AT_rich Low_complexity Low_complexity 1 24 0 2281 261 52 3 chr17 16441490 16442138 -73062415 - L1ME3A LINE L1 -51 6119 5440 2333 108 0 6 chr17 16442193 16442507 -73062046 + AluSx SINE Alu 1 312 0 349 247 55 55 chr17 16442653 16442799 -73061754 - L1ME3A LINE L1 -271 5899 5754 485 237 78 63 chr17 16442855 16443232 -73061321 - L1ME3A LINE L1 -517 5653 5189 362 342 107 4 chr17 16443374 16443599 -73060954 - L1ME3A LINE L1 -1158 4988 4741 2239 88 7 7 chr17 16443903 16444197 -73060356 - AluSg SINE Alu -16 294 1 360 287 33 16 chr17 16444451 16444571 -73059982 - MER102b DNA MER1_type -2 339 218 683 255 60 0 chr17 16444571 16444755 -73059798 - MER58A DNA MER1_type 0 224 30 2422 74 0 3 chr17 16444859 16445156 -73059397 - AluY SINE Alu -14 297 2 635 339 125 34 chr17 16445272 16445926 -73058627 + L2 LINE L2 2165 2878 -436 4913 201 91 26 chr17 16445929 16446094 -73058459 - Charlie1 DNA MER1_type -1 2760 2607 829 180 0 0 chr17 16446094 16446222 -73058331 + FLAM_C SINE Alu 1 128 -5 4913 201 91 26 chr17 16446222 16447400 -73057153 - Charlie1 DNA MER1_type -154 2607 5 636 257 33 71 chr17 16447452 16447662 -73056891 - MIR SINE MIR -5 257 56 288 254 15 0 chr17 16447716 16447783 -73056770 + L2 LINE L2 3237 3304 -9 893 294 43 29 chr17 16448119 16448534 -73056019 - L1MC4a LINE L1 -1741 6067 5647 2429 82 0 7 chr17 16450916 16451219 -73053334 - AluY SINE Alu -9 302 2 2382 158 80 5 chr17 16451720 16452118 -73052435 - MSTA LTR MaLR 0 428 1 216 97 0 0 chr17 16452124 16452155 -73052398 + (A)n Simple_repeat Simple_repeat 1 31 0 643 279 6 36 chr17 16452214 16452379 -73052174 + MER58A DNA MER1_type 1 160 0 1698 169 55 23 chr17 16452392 16452699 -73051854 - MLT1A1 LTR MaLR -30 335 19 377 194 0 14 chr17 16452708 16452780 -73051773 + MER58A DNA MER1_type 154 224 0 475 261 124 56 chr17 16453008 16453227 -73051326 + MIR SINE MIR 10 236 -26 2376 89 3 0 chr17 16454101 16454403 -73050150 + AluSp SINE Alu 1 303 -10 2125 77 70 0 chr17 16454623 16454895 -73049658 + AluSc SINE Alu 1 291 -18 610 298 80 46 chr17 16455336 16455685 -73048868 - MLT1K LTR MaLR -153 435 75 2427 66 3 7 chr17 16455858 16456159 -73048394 + AluY SINE Alu 5 304 -7 2572 63 0 0 chr17 16456561 16456864 -73047689 - AluY SINE Alu -8 303 1 339 238 24 24 chr17 16456880 16456964 -73047589 - MLT1K LTR MaLR -92 496 413 459 0 0 0 chr17 16457400 16457451 -73047102 + (TA)n Simple_repeat Simple_repeat 2 52 0 23 68 0 0 chr17 16457607 16457651 -73046902 + AT_rich Low_complexity Low_complexity 1 44 0 3166 176 16 13 chr17 16457904 16458460 -73046093 - MER68 LTR ERV1 -4 558 1 4177 243 66 24 chr17 16458656 16459946 -73044607 + L1MC4 LINE L1 6694 8037 -5 2108 100 0 0 chr17 16460110 16460423 -73044130 - AluY SINE Alu 0 313 1 2020 65 34 74 chr17 16460450 16460773 -73043780 - AluY SINE Alu -1 310 1 1198 79 12 12 chr17 16460943 16461108 -73043445 - AluSp SINE Alu -7 306 142 1973 114 0 14 chr17 16461108 16461389 -73043164 - AluSq SINE Alu -36 277 1 252 292 75 19 chr17 16461438 16461599 -73042954 + L1ME3A LINE L1 5404 5573 -589 1041 122 47 122 chr17 16461605 16461647 -73042906 - L1MA8 LINE L1 -7 6284 6240 186 43 0 0 chr17 16461647 16461670 -73042883 + (CA)n Simple_repeat Simple_repeat 2 24 0 1041 122 47 122 chr17 16461670 16461905 -73042648 - L1MA8 LINE L1 -51 6240 6028 1296 260 62 62 chr17 16461924 16462149 -73042404 + L1ME3A LINE L1 5600 5824 -346 2386 80 0 7 chr17 16462149 16462450 -73042103 + AluY SINE Alu 1 299 -12 1296 260 62 62 chr17 16462450 16462785 -73041768 + L1ME3A LINE L1 5823 6160 -10 614 233 90 23 chr17 16463373 16463659 -73040894 - MLT2F LTR ERVL -86 577 202 248 0 31 0 chr17 16463659 16463691 -73040862 + (TG)n Simple_repeat Simple_repeat 1 33 0 228 225 0 38 chr17 16464584 16464664 -73039889 - HSAT5 Satellite Satellite -7 79 3 214 329 14 0 chr17 16465071 16465141 -73039412 + (CACG)n Simple_repeat Simple_repeat 2 72 0 250 145 16 65 chr17 16465441 16465503 -73039050 - SN5 Other centromeric -77 378 320 292 195 0 23 chr17 16465952 16466039 -73038514 - HSAT5 Satellite Satellite -1 85 1 314 230 0 29 chr17 16466070 16466171 -73038382 - HSAT5 Satellite Satellite -1 98 1 271 165 10 134 chr17 16466933 16467030 -73037523 - SN5 Other centromeric -77 378 294 1124 325 35 18 chr17 16472165 16472832 -73031721 + L1MC3 LINE L1 5479 6156 -1629 192 158 0 0 chr17 16476592 16476630 -73027923 + CT-rich Low_complexity Low_complexity 2 39 0 2242 83 10 3 chr17 16476666 16476954 -73027599 + AluY SINE Alu 5 294 -17 3399 162 17 3 chr17 16478586 16479248 -73025305 - L1 LINE L1 -1306 4840 4170 607 183 65 188 chr17 16479248 16479434 -73025119 - MLT1E2 LTR MaLR -160 494 284 350 220 63 74 chr17 16479593 16479775 -73024778 - MLT1-int LTR MaLR -51 1684 1140 2924 104 64 115 chr17 16479784 16480409 -73024144 - LTR14B LTR ERVK 0 608 16 2019 100 79 0 chr17 16480480 16480760 -73023793 + AluSp SINE Alu 1 302 -11 345 47 0 0 chr17 16480760 16480803 -73023750 + (TA)n Simple_repeat Simple_repeat 2 44 0 477 118 97 0 chr17 16481596 16481689 -73022864 - AluSp/q SINE Alu 0 313 212 244 60 113 151 chr17 16482896 16483081 -73021472 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 28 0 0 0 chr17 16484180 16484208 -73020345 + AT_rich Low_complexity Low_complexity 1 28 0 806 212 20 6 chr17 16484307 16484609 -73019944 - MLT1A2 LTR MaLR 0 374 1 609 184 83 30 chr17 16485143 16485311 -73019242 + MER3 DNA MER1_type 19 195 -14 2280 109 23 0 chr17 16485507 16485809 -73018744 + AluSg SINE Alu 1 309 -1 1153 92 7 0 chr17 16485893 16486045 -73018508 - AluSg/x SINE Alu -1 311 159 1683 198 0 3 chr17 16486126 16486424 -73018129 - AluJb SINE Alu -15 297 1 22 70 0 0 chr17 16486667 16486710 -73017843 + AT_rich Low_complexity Low_complexity 1 43 0 2273 101 7 0 chr17 16486716 16487012 -73017541 - AluSx SINE Alu -14 298 1 333 47 0 0 chr17 16487281 16487324 -73017229 + (CA)n Simple_repeat Simple_repeat 2 44 0 1164 127 0 0 chr17 16488041 16488199 -73016354 + AluSp SINE Alu 138 295 -18 218 56 28 0 chr17 16488857 16488893 -73015660 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1580 95 5 9 chr17 16489122 16489333 -73015220 - AluSq SINE Alu -17 296 87 345 305 130 25 chr17 16489699 16489899 -73014654 - MER69 DNA AcHobo -1989 537 317 400 285 28 39 chr17 16489934 16490113 -73014440 - MER69 DNA AcHobo -1019 207 31 197 286 95 0 chr17 16490825 16490888 -73013665 + L2 LINE L2 3148 3216 -56 293 250 143 0 chr17 16491000 16491084 -73013469 - MIR SINE MIR -117 145 50 320 228 39 47 chr17 16491686 16491707 -73012846 + L1MC4 LINE L1 7913 7933 -109 2065 157 0 7 chr17 16491707 16492013 -73012540 + AluSx SINE Alu 1 304 -8 320 228 39 47 chr17 16492013 16492118 -73012435 + L1MC4 LINE L1 7933 8038 -4 454 311 83 53 chr17 16492284 16492622 -73011931 - L1ME4a LINE L1 -224 5897 5550 1625 131 4 0 chr17 16492666 16492895 -73011658 + AluSq SINE Alu 68 297 -16 689 272 105 19 chr17 16492967 16493338 -73011215 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 16493421 16493444 -73011109 + AT_rich Low_complexity Low_complexity 1 23 0 1399 48 0 4 chr17 16493937 16494147 -73010406 - AluY SINE Alu -11 300 1 207 68 23 45 chr17 16494232 16494276 -73010277 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 461 222 68 12 chr17 16494337 16494499 -73010054 - L1ME4a LINE L1 -1 6120 5950 355 280 60 60 chr17 16494608 16494790 -73009763 - L1M4 LINE L1 -2990 3156 2975 4133 132 20 11 chr17 16495277 16495934 -73008619 + THE1C-int LTR MaLR 918 1580 0 1826 154 52 22 chr17 16495934 16496298 -73008255 + THE1C LTR MaLR 1 375 0 1566 213 0 19 chr17 16496624 16496939 -73007614 - AluJo SINE Alu -1 311 3 2127 113 0 14 chr17 16498544 16498878 -73005675 + AluSc SINE Alu 1 309 0 1204 175 5 14 chr17 16499080 16499291 -73005262 - AluJo SINE Alu -20 292 84 368 325 110 7 chr17 16500615 16500769 -73003784 + L3 LINE CR1 1302 1471 -106 212 330 127 29 chr17 16500889 16501062 -73003491 + MIR SINE MIR 2 191 -71 424 339 27 22 chr17 16501138 16501321 -73003232 - MIR3 SINE MIR -21 187 4 206 289 58 41 chr17 16501378 16501499 -73003054 - L2 LINE L2 -17 3255 3133 226 270 0 27 chr17 16502099 16502173 -73002380 + MIR SINE MIR 90 161 -101 225 65 0 0 chr17 16502548 16502579 -73001974 + (TG)n Simple_repeat Simple_repeat 2 32 0 2397 84 3 6 chr17 16502673 16502984 -73001569 - AluY SINE Alu -1 310 1 195 208 21 21 chr17 16503444 16503492 -73001061 - L2 LINE L2 -2 3270 3223 408 177 0 0 chr17 16503716 16503795 -73000758 - AluJ/FRAM SINE Alu -15 297 219 257 163 85 35 chr17 16503815 16503956 -73000597 + (TA)n Simple_repeat Simple_repeat 2 149 0 321 290 32 71 chr17 16503961 16504116 -73000437 + L1MC4 LINE L1 6555 6703 -1339 1844 288 26 11 chr17 16604248 16604862 -72899691 - PRIMA41-int LTR ERV1 -2620 5136 4514 1013 136 12 0 chr17 16604862 16605024 -72899529 + THE1B LTR MaLR 1 164 -200 1345 139 99 0 chr17 16605024 16605274 -72899279 - AluSg SINE Alu 0 309 38 907 147 0 0 chr17 16605374 16605524 -72899029 - L1M1 LINE L1 -5376 2189 2040 476 32 16 0 chr17 16605831 16605893 -72898660 + (GAAAA)n Simple_repeat Simple_repeat 3 65 0 487 262 107 31 chr17 16605935 16606252 -72898301 + L1PB4 LINE L1 5807 6147 -9 229 196 20 0 chr17 16606269 16606320 -72898233 + (CAG)n Simple_repeat Simple_repeat 1 52 0 2378 75 3 0 chr17 16606660 16606965 -72897588 + AluY SINE Alu 1 306 -5 971 193 6 0 chr17 16606965 16607131 -72897422 + AluJo/FRAM SINE Alu 137 303 -9 295 229 16 0 chr17 16607135 16607196 -72897357 - Tigger1 DNA MER2_type 0 2418 2357 1965 145 3 16 chr17 16607385 16607718 -72896835 - AluSx SINE Alu 0 312 1 578 188 109 0 chr17 16608050 16608178 -72896375 + MER4B LTR ERV1 9 150 -460 27 29 0 0 chr17 16608180 16608214 -72896339 + AT_rich Low_complexity Low_complexity 1 34 0 5016 149 32 26 chr17 16608214 16609240 -72895313 - L1MA2 LINE L1 -5 6299 5268 1136 147 23 81 chr17 16609245 16609299 -72895254 - THE1C LTR MaLR 0 375 319 2034 136 3 0 chr17 16609299 16609586 -72894967 - AluSg1 SINE Alu -20 289 2 1136 147 23 81 chr17 16609586 16609790 -72894763 - THE1C LTR MaLR -56 319 132 7631 20 3 2 chr17 16609890 16610923 -72893630 + L1PA3 LINE L1 5120 6155 0 835 180 17 2 chr17 16610923 16611484 -72893069 - ALR/Alpha Satellite centromeric 0 569 1 995 169 3 3 chr17 16611495 16613976 -72890577 - ALR/Alpha Satellite centromeric -13 2481 1 1132 169 7 3 chr17 16614082 16619552 -72885001 - ALR/Alpha Satellite centromeric 0 5491 1 7248 65 4 8 chr17 16619552 16620679 -72883874 + L1PA4 LINE L1 5028 6152 -3 1127 148 2 0 chr17 16620727 16622429 -72882124 - ALR/Alpha Satellite centromeric 0 1705 1 291 307 87 8 chr17 16622533 16622660 -72881893 - MIR3 SINE MIR -6 202 66 18796 58 6 1 chr17 16622861 16625912 -72878641 + L1PA4 LINE L1 3102 6155 0 3081 235 59 49 chr17 16625920 16627154 -72877399 - L1 LINE L1 -812 5222 3977 765 299 84 46 chr17 16627156 16627208 -72877345 - L1 LINE L1 -5090 865 816 2132 106 0 0 chr17 16627208 16627519 -72877034 - AluSg1 SINE Alu 0 309 1 765 299 84 46 chr17 16627519 16627858 -72876695 - L1 LINE L1 -5139 816 459 551 228 105 12 chr17 16627892 16628063 -72876490 - L1 LINE L1 -1414 4620 4434 293 218 64 39 chr17 16628063 16628141 -72876412 - L1 LINE L1 -5770 185 106 445 265 20 0 chr17 16628141 16628243 -72876310 - FLAM_C SINE Alu -37 106 3 397 267 9 19 chr17 16628245 16628350 -72876203 - L1 LINE L1 -5850 105 2 3070 266 89 26 chr17 16630444 16631649 -72872904 + L1MEc LINE L1 235 1322 -4893 2094 130 3 3 chr17 16631649 16631950 -72872603 + AluSx SINE Alu 1 301 -11 3070 266 89 26 chr17 16631950 16631983 -72872570 + L1MEc LINE L1 1322 1351 -4864 503 143 0 0 chr17 16631983 16632053 -72872500 + AluJ/FLAM SINE Alu 2 71 -241 2604 165 19 52 chr17 16632156 16632364 -72872189 - Tigger1 DNA MER2_type -914 1504 1291 1887 151 3 22 chr17 16632364 16632682 -72871871 - AluSq SINE Alu -1 312 1 2604 165 19 52 chr17 16632682 16632707 -72871846 - Tigger1 DNA MER2_type -1127 1291 1267 261 0 0 0 chr17 16632707 16632736 -72871817 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2604 165 19 52 chr17 16632736 16633017 -72871536 - Tigger1 DNA MER2_type -1151 1267 1006 553 184 19 0 chr17 16633012 16633115 -72871438 - Tigger1 DNA MER2_type -1908 510 406 * 331 286 30 28 chr17 16634054 16634366 -72870187 - LSAU Satellite Satellite 0 498 141 512 208 0 22 chr17 16634417 16634595 -72869958 + GA-rich Low_complexity Low_complexity 4 177 0 525 193 0 0 chr17 16635690 16635835 -72868718 + (CA)n Simple_repeat Simple_repeat 2 146 0 406 307 7 0 chr17 16635839 16635992 -72868561 + GA-rich Low_complexity Low_complexity 1 154 0 613 191 17 17 chr17 16636876 16636991 -72867562 - FLAM_C SINE Alu -18 115 1 239 191 0 0 chr17 16638128 16638175 -72866378 - LTR66 LTR ERVL -170 440 394 3104 241 59 16 chr17 16638281 16639193 -72865360 - L1MA9 LINE L1 -25 6287 5337 17586 87 1 1 chr17 16639202 16641516 -72863037 + L1P LINE L1 7 2320 -3826 18926 49 2 0 chr17 16641616 16643957 -72860596 - L1P LINE L1 -1898 4248 1904 1323 121 4 0 chr17 16643957 16653859 -72850694 + ALR/Alpha Satellite centromeric 1 9939 0 1727 151 50 13 chr17 16653967 16654266 -72850287 - MSTA LTR MaLR -116 312 3 429 218 20 69 chr17 16654269 16654471 -72850082 + L1MEc LINE L1 2047 2238 -4158 231 267 0 53 chr17 16655167 16655242 -72849311 + L2 LINE L2 3239 3309 -4 1540 231 33 19 chr17 16655306 16655666 -72848887 - MLT1A1 LTR MaLR 0 365 1 257 260 0 48 chr17 16656696 16656800 -72847753 - L1ME4a LINE L1 -48 6073 5975 195 189 27 0 chr17 16657260 16657297 -72847256 - MER5A DNA MER1_type -137 52 15 259 291 42 74 chr17 16657551 16657603 -72846950 - L1ME4a LINE L1 -819 5327 5275 2213 112 3 0 chr17 16657603 16657897 -72846656 - AluSp SINE Alu -18 295 1 259 291 42 74 chr17 16657897 16657975 -72846578 - L1ME4a LINE L1 -871 5275 5196 2373 130 8 8 chr17 16657975 16658330 -72846223 - THE1A LTR MaLR 0 355 1 259 291 42 74 chr17 16658330 16658576 -72845977 - L1ME4a LINE L1 -950 5196 4962 525 236 24 98 chr17 16658667 16658913 -72845640 - MLT1H LTR MaLR -207 342 115 216 353 35 17 chr17 16659406 16659522 -72845031 + MIR3 SINE MIR 13 130 -78 301 259 27 27 chr17 16659807 16659919 -72844634 - LTR41 LTR ERVL -6 767 656 287 230 97 42 chr17 16660613 16660778 -72843775 - LTR41 LTR ERVL -598 175 2 1982 163 0 3 chr17 16660940 16661253 -72843300 - AluSx SINE Alu 0 312 1 403 221 60 166 chr17 16661264 16661480 -72843073 + MLT1I LTR MaLR 114 285 -124 2002 129 0 0 chr17 16661480 16661759 -72842794 + AluY SINE Alu 1 279 -32 403 221 60 166 chr17 16661759 16661873 -72842680 + MLT1I LTR MaLR 285 409 0 474 264 75 13 chr17 16661873 16662032 -72842521 - MIR SINE MIR -67 195 27 749 107 11 0 chr17 16662063 16662172 -72842381 - BSR/Beta Satellite Satellite 0 110 1 2214 159 12 56 chr17 16662451 16662860 -72841693 - MSTD LTR MaLR -2 394 4 551 216 7 16 chr17 16663129 16663447 -72841106 + CT-rich Low_complexity Low_complexity 1 315 0 366 237 26 66 chr17 16663493 16663645 -72840908 + L1M4 LINE L1 3422 3567 -2579 602 312 45 61 chr17 16663889 16664334 -72840219 - L1MC4a LINE L1 -1880 5928 5491 4685 248 37 41 chr17 16664569 16666411 -72838142 + L1PA7 LINE L1 10 1825 -4626 9922 131 5 61 chr17 16666415 16668555 -72835998 + L1PA7 LINE L1 4101 6184 -285 1962 132 61 3 chr17 16668555 16668850 -72835703 + AluSp SINE Alu 1 312 -1 9922 131 5 61 chr17 16668850 16669117 -72835436 + L1PA7 LINE L1 6184 6464 -5 5160 250 73 24 chr17 16670018 16671117 -72833436 + L1 LINE L1 2888 4126 -2020 185 0 40 0 chr17 16671117 16671142 -72833411 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5160 250 73 24 chr17 16671142 16671998 -72832555 + L1 LINE L1 4126 4939 -1207 933 129 0 0 chr17 16671999 16672170 -72832383 + (TA)n Simple_repeat Simple_repeat 2 172 0 2086 292 60 1 chr17 16672479 16673147 -72831406 - PRIMA41-int LTR ERV1 -1593 6163 5457 3010 307 40 35 chr17 16673247 16674474 -72830079 - PRIMA41-int LTR ERV1 -4770 2986 1737 5771 155 17 9 chr17 16674474 16675435 -72829118 + LTR5 LTR ERVK 2 969 0 3010 307 40 35 chr17 16675435 16675592 -72828961 - PRIMA41-int LTR ERV1 -6019 1737 1582 291 328 53 12 chr17 16675746 16675917 -72828636 - PRIMA41-int LTR ERV1 -6310 1446 1269 1642 254 2 2 chr17 16676410 16676820 -72827733 - L1MC4a LINE L1 -887 5259 4850 710 89 10 0 chr17 16676824 16677081 -72827472 + CER Satellite Satellite 1 259 -42 6232 260 60 17 chr17 16677081 16677393 -72827160 - L1M4 LINE L1 -1221 6344 6047 1895 164 3 7 chr17 16677393 16677698 -72826855 - AluSg SINE Alu -6 304 1 6232 260 60 17 chr17 16677698 16678050 -72826503 - L1M4 LINE L1 -1518 6047 5711 1704 221 64 12 chr17 16678050 16678457 -72826096 - MSTA LTR MaLR 0 428 1 7341 211 31 17 chr17 16678457 16680086 -72824467 - MSTA-int LTR MaLR 0 1651 1 1764 222 36 14 chr17 16680086 16680505 -72824048 - MSTA LTR MaLR 0 428 1 6232 260 60 17 chr17 16680505 16680872 -72823681 - L1M4 LINE L1 -1854 5711 5361 1924 148 3 0 chr17 16680872 16681185 -72823368 - AluSx SINE Alu 0 314 1 6232 260 60 17 chr17 16681185 16683077 -72821476 - L1M4 LINE L1 -2204 5361 3287 34350 87 28 0 chr17 16683086 16687607 -72816946 + L1P LINE L1 7 4655 -1491 10707 193 62 12 chr17 16687598 16689762 -72814791 - L1M4 LINE L1 -4406 3159 886 * 2350 255 43 31 chr17 16689749 16690512 -72814041 - L1M4 LINE L1 -6832 733 17 * 654 125 0 19 chr17 16690523 16690627 -72813926 - L1PA16 LINE L1 -21 6145 6044 3711 172 26 9 chr17 16690632 16691313 -72813240 - L1PA16 LINE L1 -84 6082 5390 352 140 0 0 chr17 16691317 16691374 -72813179 + L1P LINE L1 5304 5360 -808 2469 70 0 0 chr17 16691376 16691676 -72812877 + AluY SINE Alu 1 300 -11 541 297 203 3 chr17 16692427 16692737 -72811816 + MLT1H1 LTR MaLR 32 405 -162 21 0 0 0 chr17 16692849 16692870 -72811683 + AT_rich Low_complexity Low_complexity 1 21 0 257 200 0 0 chr17 16692873 16692918 -72811635 + MLT1H1 LTR MaLR 546 590 0 1073 253 74 38 chr17 16693320 16693739 -72810814 - L1MD2 LINE L1 -18 6341 5908 22 35 0 0 chr17 16694711 16694740 -72809813 + GC_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr17 16695795 16695817 -72808736 + GC_rich Low_complexity Low_complexity 1 22 0 329 159 35 53 chr17 16695871 16695984 -72808569 - MER45C DNA AcHobo -355 598 488 596 163 108 16 chr17 16698251 16698380 -72806173 + AluJb SINE Alu 1 141 -171 34 45 0 15 chr17 16698401 16698419 -72806134 + AT_rich Low_complexity Low_complexity 1 18 -47 2226 90 0 3 chr17 16698419 16698707 -72805846 + AluY SINE Alu 1 287 -24 34 45 0 15 chr17 16698707 16698754 -72805799 + AT_rich Low_complexity Low_complexity 18 65 0 2144 117 7 0 chr17 16698761 16699061 -72805492 + AluSp SINE Alu 1 302 -11 315 71 0 0 chr17 16699120 16699162 -72805391 + (CCTG)n Simple_repeat Simple_repeat 1 42 0 620 139 0 133 chr17 16699163 16699329 -72805224 - AluJb SINE Alu -32 280 137 252 266 28 37 chr17 16699674 16699783 -72804770 + LTR54B LTR ERV1 39 146 -352 186 43 0 0 chr17 16702185 16702208 -72802345 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2140 124 0 3 chr17 16702604 16702925 -72801628 + AluSc SINE Alu 1 320 0 911 134 169 6 chr17 16703710 16703882 -72800671 + AluSg/x SINE Alu 96 295 -17 228 246 0 0 chr17 16704677 16704742 -72799811 + L1MC/D LINE L1 5665 5729 -630 543 206 0 0 chr17 16705153 16705328 -72799225 + GA-rich Low_complexity Low_complexity 2 176 0 239 177 48 0 chr17 16705328 16705390 -72799163 + (CAGA)n Simple_repeat Simple_repeat 1 65 0 551 195 0 6 chr17 16705390 16705554 -72798999 + GA-rich Low_complexity Low_complexity 2 164 0 317 196 0 10 chr17 16705576 16705678 -72798875 + GA-rich Low_complexity Low_complexity 2 102 0 567 174 0 0 chr17 16705699 16705848 -72798705 + GA-rich Low_complexity Low_complexity 2 150 0 642 192 3 3 chr17 16705885 16706212 -72798341 + GA-rich Low_complexity Low_complexity 1 327 0 224 189 0 0 chr17 16706298 16706335 -72798218 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1895 102 11 21 chr17 16707462 16707768 -72796785 - AluSx SINE Alu 0 303 1 455 225 17 16 chr17 16707900 16708036 -72796517 - MER39B LTR ERV1 -242 411 299 798 178 0 0 chr17 16708036 16708269 -72796284 + GA-rich Low_complexity Low_complexity 1 233 0 21 0 0 0 chr17 16708369 16708390 -72796163 + AT_rich Low_complexity Low_complexity 1 21 0 3139 114 54 22 chr17 16708407 16708521 -72796032 - Tigger1 DNA MER2_type -146 2272 2163 3032 212 22 78 chr17 16708521 16709543 -72795010 - LTR5 LTR ERVK 0 969 5 3139 114 54 22 chr17 16709543 16709929 -72794624 - Tigger1 DNA MER2_type -255 2163 1756 196 267 0 0 chr17 16710947 16710992 -72793561 - L2 LINE L2 -8 3305 3261 2035 194 98 54 chr17 16711535 16712075 -72792478 - LTR6A LTR ERV1 0 564 1 2368 216 21 0 chr17 16712635 16713157 -72791396 + L1PB4 LINE L1 5620 6152 -4 263 220 0 22 chr17 16714282 16714373 -72790180 - L2 LINE L2 -1230 2084 1996 317 212 0 0 chr17 16714435 16714501 -72790052 - MER103 DNA DNA -75 91 26 267 114 0 0 chr17 16714521 16714565 -72789988 + (TG)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr17 16715153 16715174 -72789379 + AT_rich Low_complexity Low_complexity 1 21 0 9595 207 26 3 chr17 16715485 16717757 -72786796 + L1P LINE L1 3016 5331 -815 5193 173 42 61 chr17 16717754 16718855 -72785698 + L1M1 LINE L1 1477 2556 -5009 * 445 316 6 0 chr17 16719195 16719369 -72785184 + CT-rich Low_complexity Low_complexity 1 175 0 229 296 17 0 chr17 16719373 16719488 -72785065 + (TG)n Simple_repeat Simple_repeat 2 118 0 936 99 0 0 chr17 16719831 16719962 -72784591 - L1P LINE L1 -6000 146 16 1215 157 5 0 chr17 16719962 16727352 -72777201 + ALR/Alpha Satellite centromeric 1 7427 0 1134 153 2 1 chr17 16727460 16731308 -72773245 + ALR/Alpha Satellite centromeric 1 3850 -47 1162 159 1 0 chr17 16731417 16735985 -72768568 + ALR/Alpha Satellite centromeric 1 4571 -38 1153 162 2 2 chr17 16736087 16739754 -72764799 + ALR/Alpha Satellite centromeric 1 3664 -7 1321 135 4 3 chr17 16739870 16749025 -72755528 + ALR/Alpha Satellite centromeric 1 9161 -52 1112 166 6 1 chr17 16749125 16752048 -72752505 - ALR/Alpha Satellite centromeric 0 2938 1 1968 206 100 34 chr17 16752558 16753087 -72751466 - LTR6A LTR ERV1 0 564 1 310 191 59 0 chr17 16753302 16753370 -72751183 - L2 LINE L2 0 3272 3201 2389 214 19 0 chr17 16753686 16754209 -72750344 + L1PB4 LINE L1 5620 6152 -4 242 242 0 22 chr17 16755343 16755434 -72749119 - L2 LINE L2 -1230 2084 1996 314 250 0 0 chr17 16755494 16755574 -72748979 - MER103 DNA DNA -75 91 12 10453 202 25 6 chr17 16756527 16758798 -72745755 + L1P LINE L1 3016 5331 -815 2649 215 43 0 chr17 16758795 16759301 -72745252 + L1M1 LINE L1 1477 2004 -5561 * 330 276 74 84 chr17 16859312 16859515 -72645038 - L1ME LINE L1 -386 5735 5535 1618 131 4 0 chr17 16859545 16859774 -72644779 + AluSq SINE Alu 68 297 -16 675 269 105 19 chr17 16859846 16860217 -72644336 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 16860300 16860323 -72644230 + AT_rich Low_complexity Low_complexity 1 23 0 1389 48 0 4 chr17 16860816 16861026 -72643527 - AluY SINE Alu -11 300 1 207 68 23 45 chr17 16861111 16861155 -72643398 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 462 222 68 12 chr17 16861216 16861378 -72643175 - L1ME4a LINE L1 -1 6120 5950 359 226 97 86 chr17 16861483 16861669 -72642884 - L1 LINE L1 -2984 3162 2975 4062 132 20 11 chr17 16862156 16862813 -72641740 + THE1C-int LTR MaLR 918 1580 0 1958 154 52 22 chr17 16862813 16863177 -72641376 + THE1C LTR MaLR 1 375 0 1554 213 0 19 chr17 16863503 16863818 -72640735 - AluJo SINE Alu -1 311 3 957 262 34 17 chr17 16865740 16866034 -72638519 - MER89-int LTR ERV1 -5142 1659 1361 1477 206 54 12 chr17 16866043 16866378 -72638175 - MLT1A1 LTR MaLR -4 361 13 309 219 0 37 chr17 16866383 16866465 -72638088 - MER89-int LTR ERV1 -5438 1363 1285 252 363 15 0 chr17 16867594 16867729 -72636824 + (CA)n Simple_repeat Simple_repeat 1 137 0 2357 89 0 3 chr17 16871291 16871594 -72632959 + AluY SINE Alu 1 302 -9 1177 99 12 19 chr17 16871595 16871757 -72632796 + AluSc SINE Alu 130 290 -19 180 0 0 0 chr17 16871799 16871819 -72632734 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 627 120 74 0 chr17 16871825 16871933 -72632620 - AluSp/q SINE Alu -24 289 174 396 55 0 0 chr17 16871948 16872003 -72632550 + (TTGG)n Simple_repeat Simple_repeat 1 55 0 2067 115 0 7 chr17 16872003 16872290 -72632263 - AluSq SINE Alu -28 285 1 340 309 63 29 chr17 16872295 16872502 -72632051 + L1ME3A LINE L1 5360 5573 -589 781 121 28 121 chr17 16872622 16872682 -72631871 - L1MA8 LINE L1 -69 6222 6158 2085 106 41 7 chr17 16872682 16872974 -72631579 - AluSg SINE Alu -8 302 1 781 121 28 121 chr17 16872974 16873052 -72631501 - L1MA8 LINE L1 -133 6158 6108 2452 70 3 0 chr17 16873052 16873350 -72631203 - AluY SINE Alu -12 299 1 781 121 28 121 chr17 16873350 16873425 -72631128 - L1MA8 LINE L1 -183 6108 6028 1212 284 61 31 chr17 16873444 16873989 -72630564 + L1ME3A LINE L1 5600 6160 -10 21 36 0 0 chr17 16874039 16874067 -72630486 + AT_rich Low_complexity Low_complexity 1 28 0 770 229 69 44 chr17 16874110 16874448 -72630105 - L1ME LINE L1 -4572 1429 786 1955 226 84 86 chr17 16874852 16875433 -72629120 - L1ME LINE L1 -4981 1089 509 2326 158 44 5 chr17 16875433 16875843 -72628710 + MSTB LTR MaLR 1 426 0 1955 226 84 86 chr17 16875843 16876320 -72628233 - L1ME LINE L1 -5561 509 33 27 22 0 22 chr17 16876328 16876360 -72628193 + AT_rich Low_complexity Low_complexity 1 33 -11 1697 191 0 13 chr17 16876360 16876658 -72627895 - AluSx SINE Alu -18 294 1 27 22 0 22 chr17 16876658 16876670 -72627883 + AT_rich Low_complexity Low_complexity 33 44 0 276 260 83 10 chr17 16876897 16877022 -72627531 - L1MC/D LINE L1 -302 5819 5692 1744 124 26 56 chr17 16877308 16877614 -72626939 - Tigger3(Golem) DNA MER2_type -2 3027 2731 2112 142 36 28 chr17 16877616 16877975 -72626578 - THE1B LTR MaLR -2 362 1 10969 109 23 13 chr17 16877980 16878283 -72626270 - THE1B-int LTR MaLR -6 1574 1276 2519 74 0 0 chr17 16878283 16878582 -72625971 - AluY SINE Alu 0 311 13 10969 109 23 13 chr17 16878582 16879836 -72624717 - THE1B-int LTR MaLR -304 1276 1 2005 144 42 33 chr17 16879836 16880197 -72624356 - THE1B LTR MaLR 0 364 1 2583 103 38 16 chr17 16880197 16880624 -72623929 - Tigger3(Golem) DNA MER2_type -294 2735 2300 652 164 0 3 chr17 16880629 16880741 -72623812 - Tigger3(Golem) DNA MER2_type -2920 109 11 428 285 74 22 chr17 16880844 16881067 -72623486 - L1ME3A LINE L1 0 6162 5930 2414 52 0 35 chr17 16881108 16881418 -72623135 - AluY SINE Alu -12 299 1 361 198 33 57 chr17 16881464 16881638 -72622915 - L1ME3A LINE L1 -209 5955 5770 1438 229 101 24 chr17 16881661 16882206 -72622347 - L1ME3 LINE L1 -324 5838 5254 504 108 135 0 chr17 16882209 16882283 -72622270 + 5S rRNA rRNA 2 85 -36 2138 93 11 4 chr17 16882424 16882704 -72621849 + AluSq SINE Alu 15 296 -17 29 0 0 0 chr17 16882706 16882735 -72621818 + AT_rich Low_complexity Low_complexity 1 29 0 185 347 13 13 chr17 16883050 16883125 -72621428 + MIR SINE MIR 20 94 -168 2337 80 0 10 chr17 16885402 16885703 -72618850 - AluY SINE Alu -13 298 1 333 0 0 0 chr17 16885966 16886003 -72618550 + (CA)n Simple_repeat Simple_repeat 2 38 0 42 57 0 0 chr17 16886080 16886150 -72618403 + GC_rich Low_complexity Low_complexity 1 70 0 23 68 0 0 chr17 16886205 16886249 -72618304 + GC_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr17 16888121 16888142 -72616411 + AT_rich Low_complexity Low_complexity 1 21 0 293 68 0 0 chr17 16888590 16888634 -72615919 + Alu SINE Alu 256 299 0 638 272 94 48 chr17 16891524 16891674 -72612879 - L1ME3 LINE L1 -1053 5093 4951 2660 46 0 3 chr17 16891674 16891980 -72612573 - AluY SINE Alu -6 305 1 638 272 94 48 chr17 16891980 16892419 -72612134 - L1ME3 LINE L1 -1195 4951 2681 2629 47 0 0 chr17 16892981 16893282 -72611271 + AluY SINE Alu 1 301 -10 796 170 55 83 chr17 16893498 16893716 -72610837 + L1MA8 LINE L1 6055 6266 -25 1470 171 3 51 chr17 16893810 16894103 -72610450 - AluJb SINE Alu -33 279 1 180 0 0 0 chr17 16894375 16894395 -72610158 + (TA)n Simple_repeat Simple_repeat 2 21 0 2077 97 13 7 chr17 16894586 16894884 -72609669 - AluSc SINE Alu -9 300 1 20035 46 2 1 chr17 16895162 16898407 -72606146 - L1PA5 LINE L1 0 6154 2933 2384 104 0 0 chr17 16898833 16899142 -72605411 - AluSg SINE Alu -1 309 1 2251 80 3 52 chr17 16899164 16899491 -72605062 - AluY SINE Alu 0 311 1 2397 82 3 0 chr17 16899561 16899866 -72604687 + AluY SINE Alu 1 306 -5 1026 137 0 0 chr17 16899881 16900027 -72604526 + AluSc SINE Alu 145 290 -19 2817 29 0 0 chr17 16900027 16900334 -72604219 + AluY SINE Alu 1 307 -4 203 176 59 39 chr17 16900949 16901000 -72603553 - MER5A DNA MER1_type -137 52 1 332 277 18 0 chr17 16901999 16902111 -72602442 - L2 LINE L2 -5 3267 3154 377 312 110 41 chr17 16902419 16903081 -72601472 - L2 LINE L2 -257 3056 2317 3316 38 15 0 chr17 16903192 16903590 -72600963 + L1PA7 LINE L1 5751 6154 0 2380 68 10 0 chr17 16903640 16903935 -72600618 + AluY SINE Alu 3 300 -11 2523 51 3 0 chr17 16903946 16904241 -72600312 + AluY SINE Alu 1 296 -15 186 208 0 0 chr17 16904854 16904902 -72599651 + CT-rich Low_complexity Low_complexity 3 50 0 * 486 136 0 0 chr17 16904899 16904980 -72599573 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 2121 128 23 7 chr17 16904992 16905297 -72599256 - AluSx SINE Alu -2 310 1 2554 61 0 0 chr17 16905673 16905969 -72598584 - AluY SINE Alu -15 296 1 2429 84 0 3 chr17 16905969 16906267 -72598286 - AluY SINE Alu -13 298 1 189 107 0 0 chr17 16906270 16906298 -72598255 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 208 323 15 0 chr17 16906387 16906452 -72598101 - L2 LINE L2 -20 3252 3187 2337 97 0 0 chr17 16907405 16907694 -72596859 - AluSc SINE Alu -20 289 1 1461 108 0 0 chr17 16909753 16909938 -72594615 + AluSq SINE Alu 1 185 -128 252 276 26 0 chr17 16910281 16910357 -72594196 - MER116 DNA Mariner -1 79 2 272 244 51 0 chr17 16910369 16910447 -72594106 - MIR3 SINE MIR -44 164 83 288 272 0 0 chr17 16910555 16910647 -72593906 - L1MC4 LINE L1 -1337 6705 6614 * 301 267 0 0 chr17 16910567 16910657 -72593896 + L1MC4 LINE L1 6614 6703 -1339 2299 109 0 0 chr17 16910674 16910968 -72593585 - AluSp SINE Alu -19 294 1 727 239 49 51 chr17 16910974 16911083 -72593470 + L1M4c LINE L1 2101 2209 -4173 2398 107 0 0 chr17 16911083 16911392 -72593161 + AluSg1 SINE Alu 1 309 0 727 239 49 51 chr17 16911392 16911715 -72592838 + L1M4c LINE L1 2209 2533 -3849 295 169 68 0 chr17 16911728 16911787 -72592766 + L1MA9 LINE L1 6250 6312 0 535 232 15 66 chr17 16911801 16911904 -72592649 + L1MA10 LINE L1 6023 6116 -218 2092 118 0 4 chr17 16911904 16912225 -72592328 + AluSc SINE Alu 1 320 0 535 232 15 66 chr17 16912225 16912316 -72592237 + L1MA10 LINE L1 6116 6210 -124 1708 232 82 37 chr17 16912411 16913269 -72591284 + L1MCa LINE L1 2316 3203 -3223 1260 57 0 40 chr17 16914116 16914293 -72590260 + L1PB1 LINE L1 5982 6151 0 22 0 0 0 chr17 16914582 16914604 -72589949 + AT_rich Low_complexity Low_complexity 1 22 0 546 270 52 37 chr17 16916013 16916283 -72588270 + L1MCa LINE L1 4170 4443 -1983 922 207 20 5 chr17 16916299 16916502 -72588051 + L1PB4 LINE L1 4874 5079 -1067 * 2270 178 60 7 chr17 16916489 16917076 -72587477 + L1PB4 LINE L1 5514 6161 0 579 277 69 52 chr17 16918554 16919020 -72585533 - L1M4 LINE L1 -2232 3914 3441 691 98 98 25 chr17 16919037 16919159 -72585394 - AluSx SINE Alu -3 307 177 523 99 0 0 chr17 16919157 16919228 -72585325 - AluSx SINE Alu -175 137 67 * 1219 140 36 5 chr17 16919228 16919421 -72585132 - AluSx SINE Alu -113 199 1 308 314 57 19 chr17 16919423 16919633 -72584920 - L1M4 LINE L1 -2721 3425 3208 2404 91 0 0 chr17 16919638 16919935 -72584618 - AluSq SINE Alu -16 297 1 2508 71 3 6 chr17 16919945 16920256 -72584297 - AluSp SINE Alu -3 310 1 320 276 79 49 chr17 16920307 16920510 -72584043 - L1M4 LINE L1 -2210 3936 3728 2433 62 3 20 chr17 16920520 16920824 -72583729 - AluY SINE Alu -12 299 1 23 33 0 0 chr17 16920946 16920976 -72583577 + AT_rich Low_complexity Low_complexity 1 30 0 580 281 52 13 chr17 16921367 16921598 -72582955 - MIR SINE MIR -16 246 7 380 269 40 62 chr17 16921604 16921831 -72582722 - L2 LINE L2 -169 3103 2882 514 171 143 0 chr17 16922532 16922637 -72581916 - MER103 DNA DNA -46 120 1 3946 178 65 48 chr17 16923377 16924298 -72580255 - L1MB7 LINE L1 -10 6174 5256 1306 207 48 40 chr17 16924608 16924961 -72579592 - L1MB7 LINE L1 -912 5234 4879 * 5632 226 38 52 chr17 16924959 16925301 -72579252 - L1MB7 LINE L1 -1893 4253 3908 2391 99 0 6 chr17 16925301 16925613 -72578940 - AluY SINE Alu -1 310 1 5632 226 38 52 chr17 16925613 16925982 -72578571 - L1MB7 LINE L1 -2238 3908 3536 2432 92 7 0 chr17 16925982 16926286 -72578267 - AluSp SINE Alu -7 306 1 5632 226 38 52 chr17 16926286 16927427 -72577126 - L1MB7 LINE L1 -2610 3536 2425 1929 107 40 20 chr17 16927436 16927598 -72576955 - AluSq SINE Alu -7 306 134 2300 110 0 0 chr17 16927598 16927897 -72576656 - AluSc SINE Alu -10 299 1 1929 107 40 20 chr17 16927897 16928034 -72576519 - AluSq SINE Alu -179 134 1 363 145 12 48 chr17 16928035 16928118 -72576435 - L1 LINE L1 -893 5253 5174 359 114 0 14 chr17 16929115 16929185 -72575368 - L1PA16 LINE L1 -18 6148 6080 728 239 12 6 chr17 16929727 16929890 -72574663 - FRAM SINE Alu -2 164 1 1926 150 3 7 chr17 16930433 16930726 -72573827 + AluSq SINE Alu 1 292 -21 1279 247 58 80 chr17 16930822 16930889 -72573664 - MER82 DNA MER2_type 0 653 586 2029 91 84 4 chr17 16930889 16931163 -72573390 - AluSp SINE Alu -17 296 1 1279 247 58 80 chr17 16931163 16931560 -72572993 - MER82 DNA MER2_type -67 586 199 230 318 56 9 chr17 16932618 16932725 -72571828 + MER5B DNA MER1_type 50 161 -17 281 336 0 40 chr17 16932897 16933046 -72571507 - MER5B DNA MER1_type -33 145 3 204 40 0 0 chr17 16934062 16934087 -72570466 + (GGAGAA)n Simple_repeat Simple_repeat 6 30 0 184 316 13 13 chr17 16936130 16936209 -72568344 + MIR3 SINE MIR 118 196 -12 3494 91 20 14 chr17 16938149 16938657 -72565896 + MER9 LTR ERVK 1 511 0 2246 114 7 0 chr17 16939420 16939727 -72564826 - AluY SINE Alu -2 309 1 2889 3 0 0 chr17 16939966 16940269 -72564284 - AluYa5 SINE Alu -8 303 1 446 295 113 43 chr17 16940479 16940924 -72563629 - L1ME4a LINE L1 -102 6019 5499 2612 51 0 6 chr17 16940924 16941235 -72563318 - AluY SINE Alu -2 309 1 446 295 113 43 chr17 16941235 16941497 -72563056 - L1ME4a LINE L1 -622 5499 5257 1550 200 24 0 chr17 16941534 16941829 -72562724 - AluJb SINE Alu -10 302 1 237 83 0 0 chr17 16942028 16942064 -72562489 + (CA)n Simple_repeat Simple_repeat 1 36 0 2116 123 10 10 chr17 16942484 16942792 -72561761 + AluSx SINE Alu 1 308 -4 835 172 0 8 chr17 16944035 16944169 -72560384 + AluSq/x SINE Alu 1 133 -179 21 0 0 0 chr17 16944607 16944628 -72559925 + AT_rich Low_complexity Low_complexity 1 21 0 183 281 288 13 chr17 16944714 16944867 -72559686 + MIR SINE MIR 38 232 -30 2129 135 78 66 chr17 16944881 16944923 -72559630 - MSTA LTR MaLR 0 428 388 2135 141 0 0 chr17 16944923 16945222 -72559331 + AluSx SINE Alu 1 299 -13 2129 135 78 66 chr17 16945222 16945269 -72559284 - MSTA LTR MaLR -40 388 343 2327 97 0 7 chr17 16945269 16945568 -72558985 + AluY SINE Alu 2 298 -13 2129 135 78 66 chr17 16945568 16945900 -72558653 - MSTA LTR MaLR -85 343 1 1530 186 19 0 chr17 16946048 16946306 -72558247 + AluJb SINE Alu 1 263 -49 395 105 0 7 chr17 16946307 16946368 -72558185 - Alu SINE Alu -245 55 3 2087 135 13 13 chr17 16946376 16946688 -72557865 - AluSx SINE Alu 0 312 1 486 75 0 0 chr17 16946757 16946824 -72557729 + (CA)n Simple_repeat Simple_repeat 2 68 0 2451 68 3 0 chr17 16949732 16950025 -72554528 + AluY SINE Alu 5 298 -13 241 270 0 0 chr17 16950576 16950639 -72553914 - L1ME4a LINE L1 -104 6017 5955 231 61 0 0 chr17 16950639 16950672 -72553881 + (TG)n Simple_repeat Simple_repeat 2 34 0 340 276 0 75 chr17 16950744 16950878 -72553675 + L2 LINE L2 3189 3312 -1 248 261 136 45 chr17 16951073 16951249 -72553304 - LTR67 LTR ERVL -8 549 358 655 299 82 49 chr17 16952365 16953271 -72551282 + L1MEc LINE L1 988 1938 -4669 1868 243 69 59 chr17 16953273 16953838 -72550715 + L1MEc LINE L1 3478 4058 -2368 2288 84 3 0 chr17 16953838 16954150 -72550403 - AluSp SINE Alu 0 313 1 1868 243 69 59 chr17 16954150 16954493 -72550060 + L1MEc LINE L1 4058 4396 -2030 629 217 25 84 chr17 16954751 16954822 -72549731 - MIR SINE MIR -3 259 185 2230 115 3 3 chr17 16954822 16955126 -72549427 - AluSx SINE Alu -8 304 1 629 217 25 84 chr17 16955126 16955257 -72549296 - MIR SINE MIR -77 185 69 1096 109 81 97 chr17 16955478 16955593 -72548960 - L1MB1 LINE L1 0 6168 6053 1218 102 56 10 chr17 16955593 16955789 -72548764 - L1PA16 LINE L1 -9 6157 5953 1096 109 81 97 chr17 16955789 16955920 -72548633 - L1MB1 LINE L1 -115 6053 5926 1467 126 53 148 chr17 16955921 16956333 -72548220 + THE1C LTR MaLR 1 373 -2 8892 125 50 9 chr17 16956335 16957689 -72546864 + THE1C-int LTR MaLR 1 1410 -170 3258 141 17 33 chr17 16957710 16958286 -72546267 - L1MB1 LINE L1 -235 5933 5367 647 176 59 17 chr17 16958895 16959014 -72545539 - FLAM_C SINE Alu -9 124 1 200 367 100 0 chr17 16959425 16959545 -72545008 + MIR3 SINE MIR 70 201 -7 729 158 0 47 chr17 16959573 16959700 -72544853 + FLAM_A SINE Alu 12 132 -10 1714 179 124 29 chr17 16959799 16960218 -72544335 + LTR2B LTR ERV1 32 490 0 404 145 0 0 chr17 16960456 16960518 -72544035 + MER45A DNA AcHobo 65 126 -52 1993 137 26 16 chr17 16962101 16962408 -72542145 - AluSg SINE Alu 0 310 1 413 113 32 0 chr17 16962732 16962794 -72541759 - AluSg/x SINE Alu -83 229 166 1665 170 61 4 chr17 16963243 16963407 -72541146 - AluJo SINE Alu -13 299 111 234 0 0 0 chr17 16963407 16963433 -72541120 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1665 170 61 4 chr17 16963433 16963545 -72541008 - AluJo SINE Alu -201 111 7 209 327 97 18 chr17 16964178 16964291 -72540262 + MER91A DNA MER1_type 48 169 -27 3338 132 31 26 chr17 16964291 16964869 -72539684 - LTR35 LTR ERV1 0 618 38 2211 112 0 7 chr17 16965154 16965459 -72539094 - AluSx SINE Alu -9 303 1 574 129 0 0 chr17 16965740 16965833 -72538720 - LTR9B LTR ERV1 -84 560 468 1594 287 38 9 chr17 16965833 16966383 -72538170 - L1ME3A LINE L1 -286 5884 5319 392 225 49 21 chr17 16966435 16966577 -72537976 - L1ME3A LINE L1 -814 5332 5187 317 221 0 11 chr17 16966578 16966673 -72537880 + CT-rich Low_complexity Low_complexity 4 97 0 7141 50 8 36 chr17 16966693 16968279 -72536274 + SVA Other Other 35 1379 -7 383 227 10 0 chr17 16968284 16968381 -72536172 - L1ME3A LINE L1 -966 5180 5083 2336 81 0 26 chr17 16968388 16968698 -72535855 + AluY SINE Alu 1 302 -9 252 263 13 0 chr17 16968700 16968776 -72535777 + L1MB7 LINE L1 6108 6184 0 32 81 0 0 chr17 16968858 16968932 -72535621 + AT_rich Low_complexity Low_complexity 1 74 0 2031 134 0 0 chr17 16968935 16969239 -72535314 + AluSx SINE Alu 1 304 0 806 219 10 42 chr17 16969920 16970112 -72534441 + MER58A DNA MER1_type 30 215 -9 349 66 262 0 chr17 16970129 16970190 -72534363 + MADE1 DNA Mariner 1 77 -3 1374 155 109 0 chr17 16970257 16970496 -72534057 + AluJb SINE Alu 1 265 -47 2348 185 69 14 chr17 16971319 16971828 -72532725 + MER68 LTR ERV1 1 537 -25 1610 180 40 15 chr17 16971832 16972159 -72532394 + L1MB5 LINE L1 5802 6136 -38 4407 169 50 18 chr17 16972174 16973119 -72531434 - L1 LINE L1 -1337 4809 3835 4430 137 9 75 chr17 16973123 16974267 -72530286 + L1PB3 LINE L1 4970 6033 -140 1379 217 0 14 chr17 16974306 16974592 -72529961 + AluJo SINE Alu 1 282 -30 301 313 106 21 chr17 16974646 16975033 -72529520 - L1ME LINE L1 -429 5692 5270 3862 224 167 73 chr17 16975139 16975483 -72529070 - HAL1 LINE L1 -109 2398 2088 2155 97 10 0 chr17 16975483 16975781 -72528772 - AluSx SINE Alu -11 301 1 3862 224 167 73 chr17 16975781 16976653 -72527900 - HAL1 LINE L1 -419 2088 1299 2349 114 41 3 chr17 16976653 16977022 -72527531 - L1MB2 LINE L1 -4 6167 5785 3862 224 167 73 chr17 16977022 16977984 -72526569 - HAL1 LINE L1 -1208 1299 14 279 0 0 0 chr17 16978085 16978116 -72526437 + (CA)n Simple_repeat Simple_repeat 2 32 0 720 314 95 57 chr17 16978459 16978953 -72525600 - L1ME LINE L1 -1940 4206 3694 1645 175 7 13 chr17 16979069 16979372 -72525181 + AluJo SINE Alu 1 301 -11 2386 63 0 0 chr17 16979436 16979737 -72524816 - AluY SINE Alu -10 301 1 2185 110 0 0 chr17 16980992 16981301 -72523252 - AluY SINE Alu -2 309 1 1437 204 50 23 chr17 16981311 16981654 -72522899 - L1MB3 LINE L1 -2 6181 5830 884 209 0 0 chr17 16982330 16982493 -72522060 + FRAM SINE Alu 1 160 -16 259 247 130 13 chr17 16983486 16983563 -72520990 + L1MB3 LINE L1 5830 5915 -268 275 196 36 0 chr17 16983685 16983741 -72520812 + L1MC/D LINE L1 5690 5747 -2061 557 318 114 4 chr17 16983807 16984043 -72520510 - MIR SINE MIR 0 262 1 731 177 82 0 chr17 16984156 16984303 -72520250 + MER3 DNA MER1_type 1 159 -50 6067 93 21 19 chr17 16984303 16985195 -72519358 - L1PA11 LINE L1 -3 6171 5278 2211 109 0 0 chr17 16985335 16985639 -72518914 + AluSx SINE Alu 1 304 -8 287 317 37 0 chr17 16985700 16985782 -72518771 - MIR3 SINE MIR -48 160 76 581 238 23 57 chr17 16985895 16986086 -72518467 + MER6 DNA MER2_type -52 864 -1 2139 77 0 65 chr17 16987569 16987893 -72516660 + AluY SINE Alu 1 303 -8 570 222 66 100 chr17 16988101 16988506 -72516047 - MLT1H1 LTR MaLR 0 595 1 330 75 0 0 chr17 16988720 16988760 -72515793 + (TA)n Simple_repeat Simple_repeat 2 41 0 2113 104 3 22 chr17 16988760 16989077 -72515476 - AluSq SINE Alu -2 311 1 193 335 6 89 chr17 16989191 16989370 -72515183 - L3 LINE CR1 -768 809 646 21 0 0 0 chr17 16989483 16989504 -72515049 + AT_rich Low_complexity Low_complexity 1 21 0 584 303 112 31 chr17 16989507 16989521 -72515032 - L1MB3 LINE L1 -479 5687 5676 1988 119 0 14 chr17 16989521 16989829 -72514724 + AluSx SINE Alu 1 304 0 584 303 112 31 chr17 16989829 16990307 -72514246 - L1MB3 LINE L1 -490 5676 5237 301 309 117 31 chr17 16990328 16990370 -72514183 - L1MB3 LINE L1 -978 5168 5131 351 0 0 0 chr17 16990370 16990409 -72514144 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 301 309 117 31 chr17 16990409 16990528 -72514025 - L1MB3 LINE L1 -1015 5131 4993 262 381 58 9 chr17 16990536 16990759 -72513794 + L1MEc LINE L1 149 382 -6014 2127 88 3 3 chr17 16990894 16991207 -72513346 + AluSx SINE Alu 1 313 0 1728 142 23 26 chr17 16991589 16991755 -72512798 - AluSx SINE Alu -10 302 137 2014 111 0 41 chr17 16991755 16992070 -72512483 - AluSx SINE Alu -10 302 1 1728 142 23 26 chr17 16992070 16992092 -72512461 - AluSx SINE Alu -175 137 116 1947 122 3 3 chr17 16992092 16992378 -72512175 - AluSq SINE Alu -27 286 1 1728 142 23 26 chr17 16992378 16992491 -72512062 - AluSx SINE Alu -196 116 1 249 108 0 0 chr17 16992541 16992578 -72511975 + (T)n Simple_repeat Simple_repeat 1 37 0 363 136 0 0 chr17 16993378 16993437 -72511116 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 361 211 40 0 chr17 16993613 16993689 -72510864 - MER103 DNA DNA -60 106 28 853 231 61 5 chr17 16993748 16993960 -72510593 - MER58A DNA MER1_type 0 224 1 363 314 116 6 chr17 16994504 16994676 -72509877 - L2 LINE L2 -730 2584 2394 1697 172 28 81 chr17 16994790 16995220 -72509333 - MLT2D LTR ERVL -7 407 1 425 268 53 75 chr17 16995302 16995455 -72509098 - L2 LINE L2 -941 2373 2227 806 184 95 16 chr17 16995455 16995645 -72508908 + MER3 DNA MER1_type 5 209 0 425 268 53 75 chr17 16995645 16995756 -72508797 - L2 LINE L2 -1087 2227 2115 315 310 66 88 chr17 16995757 16996031 -72508522 + L1MEc LINE L1 346 613 -5592 648 230 82 61 chr17 16996104 16996482 -72508071 + L1MEc LINE L1 786 1171 -5034 378 301 121 35 chr17 16996529 16996811 -72507742 - MLT1L LTR MaLR -109 506 201 519 229 59 36 chr17 16996929 16997190 -72507363 + L1MEc LINE L1 1162 1458 -4863 1696 179 0 0 chr17 16997196 16997493 -72507060 + AluJo SINE Alu 1 297 -15 371 304 41 3 chr17 16997513 16997719 -72506834 + L1ME LINE L1 5286 5495 -656 892 129 7 0 chr17 16998193 16998340 -72506213 - AluSg/q SINE Alu -1 312 165 1366 85 0 0 chr17 16998400 16998577 -72505976 - AluSg SINE Alu -133 177 1 2136 113 0 3 chr17 16998858 16999158 -72505395 + AluSx SINE Alu 1 299 -13 4696 107 7 34 chr17 16999346 16999737 -72504816 - L1PA16 LINE L1 0 6166 5766 2172 112 0 0 chr17 16999737 17000041 -72504512 - AluSc SINE Alu -5 304 1 4696 107 7 34 chr17 17000041 17000350 -72504203 - L1PA16 LINE L1 -400 5766 5484 1649 174 16 22 chr17 17000350 17000661 -72503892 - AluJo SINE Alu -3 309 1 4696 107 7 34 chr17 17000661 17000698 -72503855 - L1PA16 LINE L1 -682 5484 5448 2282 90 7 0 chr17 17001095 17001396 -72503157 + AluSp SINE Alu 1 303 -10 294 292 343 11 chr17 17001434 17001612 -72502941 - MIR SINE MIR -11 251 15 2079 136 30 66 chr17 17001774 17002131 -72502422 - L1MB3 LINE L1 -2 6181 5841 1828 95 58 4 chr17 17002131 17002405 -72502148 - AluSx SINE Alu -17 295 7 2079 136 30 66 chr17 17002405 17002487 -72502066 - L1MB3 LINE L1 -342 5841 5758 341 307 48 12 chr17 17002819 17002985 -72501568 + L1ME3A LINE L1 5995 6166 -4 5790 218 56 49 chr17 17003681 17004075 -72500478 - L1MC/D LINE L1 -745 5401 5011 809 153 0 0 chr17 17004075 17004193 -72500360 - FLAM_C SINE Alu -15 118 1 5790 218 56 49 chr17 17004193 17004305 -72500248 - L1MC/D LINE L1 -1135 5011 4901 1926 71 60 7 chr17 17004305 17004587 -72499966 - AluY SINE Alu -10 301 5 5790 218 56 49 chr17 17004587 17005287 -72499266 - L1MC/D LINE L1 -1245 4901 4207 1730 133 4 7 chr17 17005287 17005558 -72498995 - AluSc SINE Alu -2 307 38 5790 218 56 49 chr17 17005558 17005579 -72498974 - L1MC/D LINE L1 -1939 4207 4188 2088 117 0 0 chr17 17005579 17005869 -72498684 - AluSg SINE Alu -20 290 1 5790 218 56 49 chr17 17005869 17006672 -72497881 - L1MC/D LINE L1 -1958 4188 3491 853 163 36 60 chr17 17007999 17008165 -72496388 - AluJb SINE Alu -12 300 139 627 225 25 50 chr17 17008956 17009142 -72495411 + FRAM SINE Alu 1 179 0 1369 95 77 45 chr17 17010138 17010218 -72494335 - MER30 DNA MER1_type 0 230 154 2059 115 0 3 chr17 17010218 17010514 -72494039 - AluSx SINE Alu -17 295 1 1369 95 77 45 chr17 17010514 17010654 -72493899 - MER30 DNA MER1_type -76 154 3 395 275 96 42 chr17 17010822 17010989 -72493564 + MER5B DNA MER1_type 2 177 -1 1690 152 0 48 chr17 17011701 17011846 -72492707 + AluJo SINE Alu 5 129 -183 2103 116 0 7 chr17 17011846 17012148 -72492405 + AluSx SINE Alu 1 300 -12 1690 152 0 48 chr17 17012148 17012311 -72492242 + AluJo SINE Alu 129 298 -14 203 321 0 0 chr17 17012597 17012653 -72491900 + (CA)n Simple_repeat Simple_repeat 1 56 0 1434 194 7 27 chr17 17014126 17014420 -72490133 - AluJo SINE Alu -24 288 1 2354 179 28 26 chr17 17014881 17015385 -72489168 - MLT1D LTR MaLR 0 505 1 1251 205 49 43 chr17 17015461 17015874 -72488679 - MLT2B1 LTR ERVL 0 414 1 1665 203 81 47 chr17 17016246 17016690 -72487863 - LTR2B LTR ERV1 0 490 32 605 282 0 0 chr17 17016748 17016879 -72487674 - MIR SINE MIR -119 143 13 1298 159 68 4 chr17 17016954 17017218 -72487335 + AluJo SINE Alu 1 281 -31 817 220 134 24 chr17 17017933 17018224 -72486329 - MLT1A1 LTR MaLR -33 332 10 679 179 36 77 chr17 17018328 17018388 -72486165 - MER53 DNA DNA -2 187 126 2085 101 10 0 chr17 17018388 17018686 -72485867 - AluSg SINE Alu -9 301 1 679 179 36 77 chr17 17018686 17018793 -72485760 - MER53 DNA DNA -63 126 27 240 244 41 89 chr17 17019413 17019536 -72485017 + L2 LINE L2 3100 3216 -56 32 0 0 0 chr17 17019755 17019787 -72484766 + AT_rich Low_complexity Low_complexity 1 32 0 1645 140 4 8 chr17 17020034 17020299 -72484254 + L1PB4 LINE L1 5893 6156 0 2282 87 0 3 chr17 17020358 17020657 -72483896 + AluSc SINE Alu 1 298 -11 695 273 56 36 chr17 17021548 17021797 -72482756 - MLT1J LTR MaLR -1 510 257 367 188 129 79 chr17 17021806 17021908 -72482645 - MLT1J LTR MaLR -239 202 65 1640 258 80 52 chr17 17022108 17022396 -72482157 - L1MC4a LINE L1 -1786 6022 5743 600 242 15 0 chr17 17022396 17022528 -72482025 + MER94 DNA DNA 1 134 0 1640 258 80 52 chr17 17022528 17022928 -72481625 - L1MC4a LINE L1 -2065 5743 5315 2140 88 0 80 chr17 17022930 17023269 -72481284 - AluSx SINE Alu 0 312 1 183 42 0 0 chr17 17023274 17023298 -72481255 + (TC)n Simple_repeat Simple_repeat 2 25 0 2305 70 0 7 chr17 17023327 17023625 -72480928 - AluY SINE Alu -15 296 1 1983 133 0 19 chr17 17023779 17024132 -72480421 - AluSq SINE Alu 0 313 1 1808 94 0 38 chr17 17024405 17024672 -72479881 + AluY SINE Alu 37 293 -18 1224 189 76 43 chr17 17024774 17024962 -72479591 - AluJo SINE Alu 0 312 109 2245 95 0 0 chr17 17024962 17025258 -72479295 - AluSx SINE Alu -16 296 1 1224 189 76 43 chr17 17025258 17025371 -72479182 - AluJo SINE Alu -203 109 1 1814 107 0 11 chr17 17025641 17025902 -72478651 + AluSg1 SINE Alu 32 289 -20 275 211 34 6 chr17 17026083 17026154 -72478399 + L1MC/D LINE L1 5679 5749 -421 557 318 114 4 chr17 17026220 17026456 -72478097 - MIR SINE MIR 0 262 1 731 177 82 0 chr17 17026569 17026716 -72477837 + MER3 DNA MER1_type 1 159 -50 6043 94 21 19 chr17 17026716 17027607 -72476946 - L1PA11 LINE L1 -4 6170 5278 2211 109 0 0 chr17 17027747 17028051 -72476502 + AluSx SINE Alu 1 304 -8 287 317 37 0 chr17 17028112 17028194 -72476359 - MIR3 SINE MIR -48 160 76 581 238 23 57 chr17 17028307 17028498 -72476055 + MER6 DNA MER2_type -52 864 -1 405 0 0 0 chr17 17028559 17028604 -72475949 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 271 377 58 9 chr17 17028731 17028954 -72475599 + L1MEc LINE L1 149 382 -6014 2127 88 3 3 chr17 17029089 17029400 -72475153 + AluSx SINE Alu 1 311 0 1720 145 23 26 chr17 17029766 17029933 -72474620 - AluSx SINE Alu -9 303 137 2057 105 0 38 chr17 17029933 17030247 -72474306 - AluSx SINE Alu -10 302 1 1720 145 23 26 chr17 17030247 17030269 -72474284 - AluSx SINE Alu -175 137 116 1945 122 3 3 chr17 17030269 17030555 -72473998 - AluSq SINE Alu -27 286 1 1720 145 23 26 chr17 17030555 17030668 -72473885 - AluSx SINE Alu -196 116 1 225 94 0 0 chr17 17030718 17030750 -72473803 + (T)n Simple_repeat Simple_repeat 1 32 0 399 127 0 0 chr17 17031550 17031613 -72472940 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 361 211 40 0 chr17 17031789 17031865 -72472688 - MER103 DNA DNA -60 106 28 853 231 61 5 chr17 17031924 17032136 -72472417 - MER58A DNA MER1_type 0 224 1 363 314 116 6 chr17 17032679 17032851 -72471702 - L2 LINE L2 -730 2584 2394 1723 170 28 81 chr17 17032965 17033395 -72471158 - MLT2D LTR ERVL -7 407 1 425 268 53 75 chr17 17033477 17033630 -72470923 - L2 LINE L2 -941 2373 2227 806 184 95 16 chr17 17033630 17033820 -72470733 + MER3 DNA MER1_type 5 209 0 425 268 53 75 chr17 17033820 17033931 -72470622 - L2 LINE L2 -1087 2227 2115 315 310 66 88 chr17 17033932 17034206 -72470347 + L1MEc LINE L1 346 613 -5592 636 233 82 61 chr17 17034279 17034657 -72469896 + L1MEc LINE L1 786 1171 -5034 378 301 121 35 chr17 17034704 17034986 -72469567 - MLT1L LTR MaLR -109 506 201 548 225 59 36 chr17 17035104 17035365 -72469188 + L1MEc LINE L1 1162 1458 -4863 1711 175 0 0 chr17 17035371 17035668 -72468885 + AluJo SINE Alu 1 297 -15 374 305 42 3 chr17 17035691 17035895 -72468658 + L1ME LINE L1 5289 5497 -683 892 129 7 0 chr17 17036368 17036515 -72468038 - AluSg/q SINE Alu -1 312 165 1361 85 0 0 chr17 17036573 17036750 -72467803 - AluSg SINE Alu -133 177 1 2192 110 0 0 chr17 17037031 17037330 -72467223 + AluSx SINE Alu 1 299 -13 4696 107 7 34 chr17 17037518 17037909 -72466644 - L1PA16 LINE L1 0 6166 5766 2172 112 0 0 chr17 17037909 17038213 -72466340 - AluSc SINE Alu -5 304 1 4696 107 7 34 chr17 17038213 17038522 -72466031 - L1PA16 LINE L1 -400 5766 5484 1616 180 16 22 chr17 17038522 17038833 -72465720 - AluJo SINE Alu -3 309 1 4696 107 7 34 chr17 17038833 17038870 -72465683 - L1PA16 LINE L1 -682 5484 5448 2252 93 7 0 chr17 17039267 17039568 -72464985 + AluSp SINE Alu 1 303 -10 294 292 343 11 chr17 17039606 17039784 -72464769 - MIR SINE MIR -11 251 15 2088 132 32 64 chr17 17039946 17040301 -72464252 - L1MB3 LINE L1 -2 6181 5841 1772 102 58 4 chr17 17040301 17040575 -72463978 - AluSx SINE Alu -17 295 7 2088 132 32 64 chr17 17040575 17040657 -72463896 - L1MB3 LINE L1 -342 5841 5758 341 307 48 12 chr17 17040989 17041155 -72463398 + L1ME3A LINE L1 5995 6166 -4 5971 218 55 43 chr17 17041851 17042236 -72462317 - L1MC/D LINE L1 -745 5401 5022 809 153 0 0 chr17 17042236 17042354 -72462199 - FLAM_C SINE Alu -15 118 1 5971 218 55 43 chr17 17042354 17042466 -72462087 - L1MC/D LINE L1 -1124 5022 4913 2071 64 60 0 chr17 17042466 17042748 -72461805 - AluY SINE Alu -12 299 1 5971 218 55 43 chr17 17042748 17043444 -72461109 - L1MC/D LINE L1 -1233 4913 4227 1730 133 4 7 chr17 17043444 17043715 -72460838 - AluSc SINE Alu -2 307 38 5971 218 55 43 chr17 17043715 17043736 -72460817 - L1MC/D LINE L1 -1919 4227 4208 2061 121 0 0 chr17 17043736 17044026 -72460527 - AluSg SINE Alu -20 290 1 5971 218 55 43 chr17 17044026 17044829 -72459724 - L1MC/D LINE L1 -1938 4208 3491 853 163 36 60 chr17 17046157 17046323 -72458230 - AluJb SINE Alu -12 300 139 617 226 25 50 chr17 17047115 17047300 -72457253 + FRAM SINE Alu 1 178 0 1369 95 77 45 chr17 17048299 17048379 -72456174 - MER30 DNA MER1_type 0 230 154 2059 115 0 3 chr17 17048379 17048675 -72455878 - AluSx SINE Alu -17 295 1 1369 95 77 45 chr17 17048675 17048815 -72455738 - MER30 DNA MER1_type -76 154 3 395 275 96 42 chr17 17048983 17049150 -72455403 + MER5B DNA MER1_type 2 177 -1 1699 152 0 48 chr17 17049862 17050007 -72454546 + AluJo SINE Alu 5 129 -183 2103 116 0 7 chr17 17050007 17050309 -72454244 + AluSx SINE Alu 1 300 -12 1699 152 0 48 chr17 17050309 17050473 -72454080 + AluJo SINE Alu 129 299 -13 203 321 0 0 chr17 17050759 17050815 -72453738 + (CA)n Simple_repeat Simple_repeat 1 56 0 1434 194 7 27 chr17 17052289 17052583 -72451970 - AluJo SINE Alu -24 288 1 2368 177 28 26 chr17 17053044 17053548 -72451005 - MLT1D LTR MaLR 0 505 1 1267 201 49 43 chr17 17053624 17054037 -72450516 - MLT2B1 LTR ERVL 0 414 1 1667 203 81 47 chr17 17054409 17054853 -72449700 - LTR2B LTR ERV1 0 490 32 605 282 0 0 chr17 17054911 17055042 -72449511 - MIR SINE MIR -119 143 13 1298 159 68 4 chr17 17055117 17055381 -72449172 + AluJo SINE Alu 1 281 -31 817 220 134 24 chr17 17056094 17056385 -72448168 - MLT1A1 LTR MaLR -33 332 10 679 179 36 77 chr17 17056489 17056549 -72448004 - MER53 DNA DNA -2 187 126 2085 101 10 0 chr17 17056549 17056847 -72447706 - AluSg SINE Alu -9 301 1 679 179 36 77 chr17 17056847 17056954 -72447599 - MER53 DNA DNA -63 126 27 240 244 41 89 chr17 17057574 17057697 -72446856 + L2 LINE L2 3100 3216 -56 31 0 0 0 chr17 17057917 17057948 -72446605 + AT_rich Low_complexity Low_complexity 1 31 0 1645 140 4 8 chr17 17058195 17058460 -72446093 + L1PB4 LINE L1 5893 6156 0 2317 87 0 0 chr17 17058519 17058817 -72445736 + AluSc SINE Alu 1 298 -11 674 277 56 36 chr17 17059711 17059960 -72444593 - MLT1J LTR MaLR -1 510 257 367 188 129 79 chr17 17059969 17060071 -72444482 - MLT1J LTR MaLR -239 202 65 1629 258 80 52 chr17 17060271 17060559 -72443994 - L1MC4a LINE L1 -1786 6022 5743 600 242 15 0 chr17 17060559 17060691 -72443862 + MER94 DNA DNA 1 134 0 1629 258 80 52 chr17 17060691 17061091 -72443462 - L1MC4a LINE L1 -2065 5743 5315 2127 96 0 63 chr17 17061093 17061426 -72443127 - AluSx SINE Alu 0 312 1 183 42 0 0 chr17 17061431 17061455 -72443098 + (TC)n Simple_repeat Simple_repeat 2 25 0 2305 70 0 7 chr17 17061482 17061780 -72442773 - AluY SINE Alu -15 296 1 1983 133 0 19 chr17 17061934 17062287 -72442266 - AluSq SINE Alu 0 313 1 414 304 21 75 chr17 17062511 17062560 -72441993 - HAL1 LINE L1 -4 2503 2453 1864 90 0 34 chr17 17062560 17062826 -72441727 + AluY SINE Alu 37 293 -18 414 304 21 75 chr17 17062826 17062922 -72441631 - HAL1 LINE L1 -54 2453 2373 1361 176 76 40 chr17 17062922 17063109 -72441444 - AluJo SINE Alu 0 312 108 2244 95 0 0 chr17 17063109 17063405 -72441148 - AluSx SINE Alu -16 296 1 1361 176 76 40 chr17 17063405 17063518 -72441035 - AluJo SINE Alu -204 108 1 414 304 21 75 chr17 17063518 17063611 -72440942 - HAL1 LINE L1 -134 2373 2277 1775 115 0 11 chr17 17063788 17064049 -72440504 + AluSg1 SINE Alu 32 289 -20 1002 267 107 78 chr17 17064261 17064796 -72439757 - L2 LINE L2 -32 3281 2763 1478 176 8 8 chr17 17064796 17065057 -72439496 + AluJo SINE Alu 39 299 -13 1002 267 107 78 chr17 17065057 17065134 -72439419 - L2 LINE L2 -550 2763 2690 2286 84 0 16 chr17 17065134 17065271 -72439282 + AluSq SINE Alu 1 139 -174 2142 101 0 3 chr17 17065271 17065567 -72438986 + AluSc SINE Alu 1 295 -14 2286 84 0 16 chr17 17065567 17065738 -72438815 + AluSq SINE Alu 139 304 -9 1002 267 107 78 chr17 17065738 17065818 -72438735 - L2 LINE L2 -623 2690 2560 240 306 14 0 chr17 17065916 17065988 -72438565 - L2 LINE L2 -982 2332 2260 1303 51 80 0 chr17 17066001 17066177 -72438376 - AluY SINE Alu -121 190 1 363 237 253 62 chr17 17066187 17066495 -72438058 - L2 LINE L2 -1312 2002 1636 1189 274 65 40 chr17 17066638 17067269 -72437284 - L2 LINE L2 -2408 906 260 2582 137 20 24 chr17 17067631 17068084 -72436469 + L1MB3 LINE L1 5690 6140 -43 24 0 0 0 chr17 17068282 17068306 -72436247 + AT_rich Low_complexity Low_complexity 1 24 0 1892 152 3 0 chr17 17068356 17068665 -72435888 - AluJb SINE Alu -2 310 1 910 136 0 0 chr17 17069104 17069236 -72435317 + FLAM_C SINE Alu 1 132 -11 245 250 21 73 chr17 17069601 17069697 -72434856 + MIR SINE MIR 45 135 -73 4486 211 49 86 chr17 17069722 17069798 -72434755 - L1M LINE L1 -778 5368 5291 2045 123 13 0 chr17 17069798 17070100 -72434453 - AluSq SINE Alu -7 306 1 4486 211 49 86 chr17 17070100 17070282 -72434271 - L1M LINE L1 -855 5291 5104 2257 92 7 0 chr17 17070282 17070586 -72433967 + AluSg SINE Alu 1 306 -4 4486 211 49 86 chr17 17070586 17071021 -72433532 - L1M LINE L1 -1042 5104 4654 2338 82 0 0 chr17 17071021 17071324 -72433229 - AluY SINE Alu -8 303 1 4486 211 49 86 chr17 17071324 17072291 -72432262 - L1M LINE L1 -1492 4654 3784 2255 120 10 0 chr17 17072292 17072593 -72431960 - AluSg SINE Alu -6 304 1 4313 237 45 66 chr17 17072721 17072870 -72431683 - L1M4c LINE L1 -4265 2394 2243 1990 160 3 3 chr17 17072870 17073176 -72431377 - AluSx SINE Alu -6 306 1 4313 237 45 66 chr17 17073176 17073936 -72430617 - L1M4c LINE L1 -4416 2243 1469 1888 138 37 24 chr17 17073936 17074103 -72430450 - AluSx SINE Alu -12 300 126 198 0 0 0 chr17 17074103 17074125 -72430428 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1888 138 37 24 chr17 17074125 17074253 -72430300 - AluSx SINE Alu -186 126 1 4313 237 45 66 chr17 17074253 17074379 -72430174 - L1M4c LINE L1 -5190 1469 1342 2090 136 7 7 chr17 17074379 17074689 -72429864 - AluSx SINE Alu -2 310 1 4313 237 45 66 chr17 17074689 17074746 -72429807 - L1M4c LINE L1 -5317 1342 1285 1760 180 6 13 chr17 17074746 17075057 -72429496 + AluJo SINE Alu 4 312 0 4313 237 45 66 chr17 17075057 17075632 -72428921 - L1M4c LINE L1 -5374 1285 604 2346 113 7 0 chr17 17075632 17075942 -72428611 - AluSq SINE Alu -1 312 1 4313 237 45 66 chr17 17075942 17076073 -72428480 - L1M4c LINE L1 -6055 604 472 448 238 82 0 chr17 17076133 17076255 -72428298 + FLAM_C SINE Alu 2 133 0 374 78 0 31 chr17 17076255 17076319 -72428234 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2271 125 0 0 chr17 17076360 17076671 -72427882 - AluY SINE Alu 0 311 1 372 273 40 60 chr17 17076717 17076867 -72427686 - MER20B DNA MER1_type -618 165 19 793 227 76 62 chr17 17076867 17077104 -72427449 - HAL1 LINE L1 -337 2170 1925 2037 131 0 7 chr17 17077104 17077410 -72427143 - AluSg SINE Alu -6 304 1 793 227 76 62 chr17 17077410 17077542 -72427011 - HAL1 LINE L1 -582 1925 1796 2506 71 7 10 chr17 17077647 17077955 -72426598 + AluY SINE Alu 1 307 -4 616 220 71 0 chr17 17078918 17079059 -72425494 + MLT1L LTR MaLR 321 471 -144 395 296 126 0 chr17 17079345 17079480 -72425073 - MIR SINE MIR -90 172 21 1952 163 3 7 chr17 17079515 17079816 -72424737 + AluJo SINE Alu 1 300 -12 209 104 0 62 chr17 17079869 17079917 -72424636 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2173 153 59 2 chr17 17080189 17080594 -72423959 + MSTA LTR MaLR 1 428 0 1793 144 0 33 chr17 17081385 17081690 -72422863 - AluJo SINE Alu -5 307 13 649 190 40 58 chr17 17081700 17081874 -72422679 - L1MB7 LINE L1 -8 6176 6006 213 311 105 39 chr17 17082129 17082415 -72422138 - L2 LINE L2 -782 2532 2228 282 318 100 21 chr17 17084661 17084895 -72419658 - MIR SINE MIR -12 250 1 275 269 43 0 chr17 17085812 17085905 -72418648 + MER5A DNA MER1_type 24 120 -69 225 209 60 30 chr17 17085845 17085912 -72418641 - MER5A DNA MER1_type -47 142 74 * 2474 85 0 0 chr17 17086995 17087290 -72417263 + AluSq SINE Alu 1 295 -18 2114 149 0 0 chr17 17087302 17087598 -72416955 + AluSx SINE Alu 3 298 -14 2162 88 70 0 chr17 17087659 17087944 -72416609 + AluSq SINE Alu 1 305 -8 409 236 57 103 chr17 17088059 17088459 -72416094 + MLT1D LTR MaLR 2 500 -5 209 301 26 44 chr17 17088546 17088659 -72415894 + L2 LINE L2 1856 1966 -1348 299 298 106 7 chr17 17088689 17088840 -72415713 + L2 LINE L2 2649 2814 -500 410 315 136 5 chr17 17090395 17090579 -72413974 - MIR SINE MIR -45 217 10 2486 81 0 0 chr17 17092053 17092348 -72412205 - AluSx SINE Alu -17 295 1 1094 153 0 0 chr17 17092687 17092844 -72411709 + AluJb SINE Alu 134 290 -22 591 268 101 42 chr17 17092845 17093166 -72411387 - HAL1 LINE L1 -873 1634 1286 1140 211 13 4 chr17 17093166 17093403 -72411150 - MER8 DNA MER2_type 0 239 1 591 268 101 42 chr17 17093403 17093458 -72411095 - HAL1 LINE L1 -1221 1286 1236 2144 119 3 28 chr17 17093458 17093777 -72410776 - AluSx SINE Alu -1 311 1 2268 107 0 3 chr17 17093787 17094078 -72410475 - AluSx SINE Alu -11 301 12 2348 100 7 13 chr17 17094660 17094969 -72409584 - AluSq SINE Alu -6 307 1 245 222 162 17 chr17 17095547 17095664 -72408889 - L2 LINE L2 -796 2518 2385 2403 90 7 0 chr17 17096088 17096387 -72408166 - AluSp SINE Alu -12 301 1 204 343 125 21 chr17 17096459 17096786 -72407767 + L2 LINE L2 2617 2977 -337 296 271 0 0 chr17 17097441 17097526 -72407027 - L1MC4 LINE L1 -33 8009 7925 2392 114 0 0 chr17 17097564 17097870 -72406683 - AluSx SINE Alu -6 306 1 396 168 144 104 chr17 17097893 17098066 -72406487 - L1MC4 LINE L1 -302 7740 7561 1417 160 55 0 chr17 17098069 17098288 -72406265 + AluJo SINE Alu 3 233 -79 291 130 37 0 chr17 17098288 17098342 -72406211 - MADE1 DNA Mariner -1 79 24 2942 3 0 0 chr17 17098342 17098649 -72405904 + AluY SINE Alu 1 307 -4 2432 68 0 17 chr17 17098659 17098955 -72405598 + AluY SINE Alu 1 291 -20 2441 77 7 0 chr17 17098957 17099254 -72405299 + AluY SINE Alu 3 301 -10 399 203 0 0 chr17 17099294 17099363 -72405190 + AluJ/FRAM SINE Alu 232 300 -2 2139 196 184 55 chr17 17099363 17099645 -72404908 - L1MC4 LINE L1 -472 7570 7326 2095 157 10 55 chr17 17099645 17100060 -72404493 - MSTD LTR MaLR 0 396 1 2139 196 184 55 chr17 17100060 17100090 -72404463 - L1MC4 LINE L1 -716 7326 7301 2238 103 0 0 chr17 17100090 17100421 -72404132 + AluSx SINE Alu 1 331 0 2139 196 184 55 chr17 17100421 17100588 -72403965 - L1MC4 LINE L1 -741 7301 7157 2144 110 50 3 chr17 17100588 17100887 -72403666 - AluSq SINE Alu 0 313 1 2139 196 184 55 chr17 17100887 17101171 -72403382 - L1MC4 LINE L1 -885 7157 6705 1180 202 49 2 chr17 17101178 17101456 -72403097 + L1MC4 LINE L1 7049 7368 -674 376 216 31 74 chr17 17102288 17102394 -72402159 - L1M4 LINE L1 -2555 3591 3493 2394 86 0 26 chr17 17102394 17102707 -72401846 + AluSq SINE Alu 1 305 -8 376 216 31 74 chr17 17102707 17102762 -72401791 - L1M4 LINE L1 -2653 3493 3437 2506 60 3 0 chr17 17102849 17103147 -72401406 + AluY SINE Alu 1 299 -12 209 279 183 10 chr17 17103382 17103486 -72401067 - L2 LINE L2 -14 3258 3137 2307 97 7 13 chr17 17105301 17105600 -72398953 - AluSx SINE Alu -15 297 1 377 112 2 0 chr17 17105688 17105753 -72398800 + Alu SINE Alu 244 301 0 1321 218 92 30 chr17 17105754 17106253 -72398300 - MER39 LTR ERV1 -195 512 24 1020 184 153 0 chr17 17106257 17106453 -72398100 - MER8 DNA MER2_type 0 239 14 259 339 107 8 chr17 17106733 17106854 -72397699 + MIR SINE MIR 34 166 -96 2207 102 3 13 chr17 17107238 17107551 -72397002 + AluY SINE Alu 1 310 -1 626 314 163 6 chr17 17107615 17107959 -72396594 + L2 LINE L2 2358 2755 -559 198 267 307 0 chr17 17108211 17108286 -72396267 + L2 LINE L2 3137 3234 -38 195 214 54 36 chr17 17108670 17108726 -72395827 + MIR3 SINE MIR 125 181 -27 1040 285 88 35 chr17 17108726 17109179 -72395374 - MLT1L LTR MaLR -18 597 121 2240 122 0 10 chr17 17109699 17110002 -72394551 - AluSx SINE Alu -12 300 1 385 255 49 0 chr17 17110013 17110115 -72394438 - L2 LINE L2 -22 3291 3185 1518 139 0 34 chr17 17110818 17111055 -72393498 - AluJb SINE Alu -8 304 76 390 260 169 45 chr17 17111280 17111522 -72393031 + L2 LINE L2 2990 3261 -52 1674 112 146 3 chr17 17111522 17111817 -72392736 + MER1B DNA MER1_type 1 337 0 546 160 50 57 chr17 17111887 17111966 -72392587 - MER6 DNA MER2_type -22 843 765 2222 145 9 52 chr17 17111966 17112387 -72392166 - MER57A LTR ERV1 0 403 1 546 160 50 57 chr17 17112387 17112466 -72392087 - MER6 DNA MER2_type -100 765 -63 2169 116 33 3 chr17 17113864 17114165 -72390388 + AluSg SINE Alu 1 310 0 390 21 0 0 chr17 17114168 17114215 -72390338 + (TA)n Simple_repeat Simple_repeat 1 47 0 422 298 233 25 chr17 17114805 17115449 -72389104 - L3 LINE CR1 -39 1538 761 2418 76 0 17 chr17 17115487 17115789 -72388764 + AluY SINE Alu 1 297 -14 2228 123 7 0 chr17 17116385 17116685 -72387868 + AluSx SINE Alu 1 302 -10 181 276 13 53 chr17 17116904 17116980 -72387573 - MIR SINE MIR -38 224 152 22 0 0 0 chr17 17117017 17117039 -72387514 + AT_rich Low_complexity Low_complexity 1 22 0 6797 64 5 93 chr17 17117039 17118103 -72386450 - SVA Other Other 0 1386 433 674 40 0 10 chr17 17118120 17118221 -72386332 - SVA Other Other -520 866 767 1726 151 22 59 chr17 17119695 17120019 -72384534 + AluJb SINE Alu 1 312 0 1818 182 3 7 chr17 17120715 17121022 -72383531 - AluJo SINE Alu -6 306 1 2454 102 0 0 chr17 17121134 17121438 -72383115 + AluSg SINE Alu 1 304 -6 2177 133 0 0 chr17 17121663 17121956 -72382597 - AluSx SINE Alu -19 293 1 756 264 41 15 chr17 17122743 17123055 -72381498 + MLT1I LTR MaLR 63 409 0 2260 114 3 0 chr17 17123092 17123391 -72381162 + AluSx SINE Alu 1 300 -12 2209 96 7 0 chr17 17124100 17124413 -72380140 - AluSq SINE Alu 0 315 1 2276 121 25 74 chr17 17124456 17124548 -72380005 + L1MA8 LINE L1 5863 5958 -333 952 132 0 22 chr17 17124548 17124684 -72379869 + FLAM_C SINE Alu 1 133 0 2276 121 25 74 chr17 17124684 17124851 -72379702 + L1MA8 LINE L1 5958 6093 -198 870 146 8 15 chr17 17124851 17124981 -72379572 + FLAM_C SINE Alu 4 132 -1 2276 121 25 74 chr17 17124981 17125165 -72379388 + L1MA8 LINE L1 6093 6285 -6 24 0 0 0 chr17 17125166 17125190 -72379363 + AT_rich Low_complexity Low_complexity 1 24 0 31 20 0 20 chr17 17125663 17125691 -72378862 + AT_rich Low_complexity Low_complexity 1 29 -19 2303 90 3 0 chr17 17125691 17125979 -72378574 - AluSp SINE Alu -24 289 1 31 20 0 20 chr17 17125979 17125999 -72378554 + AT_rich Low_complexity Low_complexity 29 48 0 182 233 17 0 chr17 17126147 17126207 -72378346 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 335 228 104 150 chr17 17126248 17126605 -72377948 - L1MB8 LINE L1 -222 5944 5572 942 154 0 0 chr17 17126605 17126735 -72377818 + FLAM_C SINE Alu 4 133 0 335 228 104 150 chr17 17126735 17126806 -72377747 - L1MB8 LINE L1 -594 5572 5542 2280 97 7 3 chr17 17126806 17127114 -72377439 + AluSx SINE Alu 1 309 -3 335 228 104 150 chr17 17127114 17127205 -72377348 - L1MB8 LINE L1 -624 5542 5448 349 236 48 122 chr17 17127229 17127391 -72377162 + L1ME4a LINE L1 5803 5975 -146 2010 128 3 3 chr17 17127391 17127687 -72376866 - AluSx SINE Alu -16 296 1 1358 183 90 24 chr17 17127687 17127977 -72376576 - AluJo SINE Alu -3 309 1 349 236 48 122 chr17 17127977 17128008 -72376545 + L1ME4a LINE L1 5974 6006 -115 2466 74 0 0 chr17 17128008 17128307 -72376246 + AluY SINE Alu 1 299 -12 349 236 48 122 chr17 17128307 17128382 -72376171 + L1ME4a LINE L1 6006 6053 -68 990 130 0 0 chr17 17128407 17128570 -72375983 - AluSg/x SINE Alu 0 308 146 320 122 0 14 chr17 17128570 17128633 -72375920 - Alu SINE Alu -257 44 1 1036 151 235 8 chr17 17128952 17129190 -72375363 + AluSg1 SINE Alu 1 292 -17 561 234 52 75 chr17 17129191 17129498 -72375055 - L1ME4a LINE L1 -224 5897 5598 21 36 0 0 chr17 17129732 17129760 -72374793 + AT_rich Low_complexity Low_complexity 1 28 0 729 143 29 0 chr17 17129857 17129962 -72374591 - FRAM SINE Alu -17 159 52 2314 81 0 3 chr17 17129968 17130296 -72374257 - AluSx SINE Alu 0 327 1 2272 110 3 0 chr17 17130509 17130808 -72373745 - AluSp SINE Alu -13 300 1 1945 151 10 10 chr17 17130943 17131247 -72373306 - AluSx SINE Alu -8 304 1 809 153 0 16 chr17 17131269 17131393 -72373160 - FLAM_C SINE Alu -19 124 3 2186 106 0 3 chr17 17131406 17131735 -72372818 - AluSc SINE Alu 0 328 1 3042 217 123 119 chr17 17131948 17132018 -72372535 + HAL1 LINE L1 15 83 -2424 2136 128 0 13 chr17 17132018 17132322 -72372231 - AluSx SINE Alu -12 300 1 3042 217 123 119 chr17 17132322 17133234 -72371319 + HAL1 LINE L1 83 1149 -1358 757 160 0 90 chr17 17133234 17133340 -72371213 + FLAM_A SINE Alu 12 103 -208 2369 79 21 0 chr17 17133340 17133630 -72370923 - AluSp SINE Alu -16 297 2 757 160 0 90 chr17 17133630 17133667 -72370886 + FLAM_A SINE Alu 103 142 -169 3042 217 123 119 chr17 17133667 17134164 -72370389 + HAL1 LINE L1 1149 1643 -864 1523 81 27 27 chr17 17134178 17134399 -72370154 + AluSp SINE Alu 86 306 -7 435 156 9 4 chr17 17134434 17134650 -72369903 + AluJo SINE Alu 1 299 -13 1254 265 80 51 chr17 17134650 17134724 -72369829 + HAL1 LINE L1 1653 1723 -784 1508 136 0 0 chr17 17134724 17134937 -72369616 + AluJb SINE Alu 87 299 -13 1727 164 27 17 chr17 17134946 17135239 -72369314 + AluJo SINE Alu 1 296 -16 1254 265 80 51 chr17 17135239 17135702 -72368851 + HAL1 LINE L1 1730 2216 -291 2217 105 3 0 chr17 17135890 17136184 -72368369 + AluSg SINE Alu 1 295 -15 2509 63 0 3 chr17 17136825 17137125 -72367428 - AluSq SINE Alu -14 299 1 314 296 122 83 chr17 17137739 17138435 -72366118 - L1M2 LINE L1 -5471 1378 656 907 310 114 41 chr17 17138727 17139573 -72364980 + L2 LINE L2 2148 3053 -219 497 237 65 7 chr17 17139669 17139808 -72364745 - MLT1J LTR MaLR -250 261 115 252 224 0 0 chr17 17139829 17139878 -72364675 + L2 LINE L2 3220 3268 -4 2130 128 7 0 chr17 17140242 17140546 -72364007 - AluSx SINE Alu -6 306 1 468 241 194 61 chr17 17140957 17141302 -72363251 - MLT1J LTR MaLR 0 511 121 1171 177 40 0 chr17 17141328 17141492 -72363061 - AluJb SINE Alu -20 292 117 297 0 0 0 chr17 17141492 17141525 -72363028 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1171 177 40 0 chr17 17141525 17141558 -72362995 - AluJb SINE Alu -195 117 87 258 263 0 53 chr17 17141558 17141634 -72362919 - MLT1J LTR MaLR -439 72 1 2380 105 0 0 chr17 17144197 17144510 -72360043 + AluSq SINE Alu 1 313 0 238 302 16 0 chr17 17145159 17145222 -72359331 - L2 LINE L2 -17 3296 3233 1805 269 169 15 chr17 17145239 17145264 -72359289 + L2 LINE L2 1818 1838 -1476 2894 191 109 44 chr17 17145264 17145951 -72358602 - MER44D DNA MER2_type -1 604 1 1805 269 169 15 chr17 17145951 17146605 -72357948 + L2 LINE L2 1838 2602 -712 902 306 75 47 chr17 17146599 17147168 -72357385 + L2 LINE L2 2731 3312 -1 * 332 251 167 26 chr17 17147870 17148097 -72356456 + L1ME4a LINE L1 5822 6080 -41 2486 80 0 10 chr17 17148230 17148541 -72356012 - AluSc SINE Alu -1 308 1 2299 76 7 0 chr17 17148552 17148841 -72355712 - AluY SINE Alu -20 291 1 425 194 121 16 chr17 17148842 17148966 -72355587 - HAL1 LINE L1 -123 2384 2248 292 235 103 37 chr17 17148980 17149116 -72355437 - HAL1 LINE L1 -356 2151 2007 2106 107 27 0 chr17 17149242 17149542 -72355011 - AluSx SINE Alu -4 308 1 375 271 42 8 chr17 17149667 17149785 -72354768 - L1ME LINE L1 -460 5644 5523 471 264 126 6 chr17 17149786 17149960 -72354593 + MIR SINE MIR 63 257 -5 1571 162 41 4 chr17 17150276 17150547 -72354006 + AluSx SINE Alu 1 281 -31 2018 78 4 0 chr17 17150662 17150907 -72353646 - AluSp SINE Alu -67 246 1 1815 157 14 3 chr17 17150990 17151277 -72353276 + AluJo SINE Alu 1 290 -22 306 256 154 17 chr17 17151388 17151505 -72353048 - L2 LINE L2 -1 3312 3180 267 250 54 27 chr17 17151827 17151939 -72352614 - L1ME LINE L1 -1487 4642 4528 1132 249 99 26 chr17 17151939 17152365 -72352188 - MLT1L LTR MaLR -6 609 153 975 160 58 11 chr17 17152652 17152840 -72351713 + MER46A DNA MER2_type 40 236 0 695 195 92 0 chr17 17153703 17153848 -72350705 + MIR SINE MIR 33 189 -64 2246 204 99 7 chr17 17154013 17154621 -72349932 - L1ME LINE L1 -2912 3217 2554 2312 108 0 0 chr17 17154622 17154927 -72349626 - AluSx SINE Alu -7 305 1 1074 90 0 0 chr17 17154930 17155063 -72349490 - AluSq/x SINE Alu -179 133 1 1421 73 0 0 chr17 17155363 17155540 -72349013 + AluY SINE Alu 127 303 -8 2322 95 0 3 chr17 17155547 17155851 -72348702 + AluSq SINE Alu 1 303 -10 1934 167 0 3 chr17 17156566 17156877 -72347676 - AluJb SINE Alu -2 310 1 2209 112 0 3 chr17 17157121 17157416 -72347137 + AluSx SINE Alu 2 295 -17 325 222 11 11 chr17 17157437 17157527 -72347026 - L1ME3A LINE L1 -230 5940 5851 648 265 169 48 chr17 17157733 17157914 -72346639 - L1ME3A LINE L1 -355 5807 5649 1650 143 0 16 chr17 17157914 17158166 -72346387 + AluSq SINE Alu 1 248 -65 648 265 169 48 chr17 17158166 17158606 -72345947 - L1ME3A LINE L1 -513 5649 5100 1478 173 10 70 chr17 17158756 17159056 -72345497 - AluJo SINE Alu -30 282 1 554 302 108 50 chr17 17159078 17159175 -72345378 - L2 LINE L2 -1 3312 3222 2307 88 7 13 chr17 17159175 17159482 -72345071 + AluSg SINE Alu 1 305 -5 554 302 108 50 chr17 17159482 17159801 -72344752 - L2 LINE L2 -91 3222 2872 296 292 77 31 chr17 17159812 17159942 -72344611 - L1ME LINE L1 -5328 791 656 383 259 170 0 chr17 17160290 17160425 -72344128 - L1ME LINE L1 -5919 200 43 239 214 169 34 chr17 17160754 17160843 -72343710 - L1ME3A LINE L1 -2305 3841 3741 2949 105 28 5 chr17 17161454 17161882 -72342671 + MER75 DNA T2_type 72 509 -5 2482 63 0 31 chr17 17162357 17162674 -72341879 - AluY SINE Alu -4 307 1 194 357 206 0 chr17 17166316 17166442 -72338111 + MER5B DNA MER1_type 7 158 -20 252 0 0 0 chr17 17166888 17166916 -72337637 + (A)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr17 17167240 17167265 -72337288 + AT_rich Low_complexity Low_complexity 1 25 0 3069 114 33 2 chr17 17168023 17168444 -72336109 - Tigger2a DNA MER2_type 0 434 1 232 266 216 10 chr17 17168745 17168874 -72335679 + MIR SINE MIR 2 155 -53 2324 68 38 0 chr17 17171133 17171425 -72333128 + AluSp SINE Alu 1 303 -10 916 132 0 132 chr17 17171877 17172066 -72332487 - AluSg/x SINE Alu -14 296 133 1543 159 24 64 chr17 17172386 17172681 -72331872 + AluJb SINE Alu 7 289 -23 11180 112 77 6 chr17 17173180 17173597 -72330956 - Tigger1 DNA MER2_type -223 2195 1809 1930 150 6 29 chr17 17173597 17173911 -72330642 - AluJb SINE Alu -5 307 1 11180 112 77 6 chr17 17173911 17175515 -72329038 - Tigger1 DNA MER2_type -609 1809 1 261 157 112 56 chr17 17176199 17176288 -72328265 - HAL1b LINE L1 -256 1092 999 1825 143 4 7 chr17 17176505 17176784 -72327769 - AluJb SINE Alu -11 301 24 2316 81 0 0 chr17 17176855 17177138 -72327415 - AluSc SINE Alu -26 283 1 2209 89 7 10 chr17 17177866 17178159 -72326394 - AluSx SINE Alu -20 292 1 193 237 0 0 chr17 17178418 17178456 -72326097 + L2 LINE L2 3267 3304 -9 334 70 0 0 chr17 17178718 17178769 -72325784 - Alu SINE Alu -8 294 253 662 170 14 71 chr17 17178818 17178959 -72325594 + FLAM_A SINE Alu 1 133 0 2252 112 0 13 chr17 17179471 17179784 -72324769 - AluSq SINE Alu -4 309 1 186 71 0 0 chr17 17179793 17179821 -72324732 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2247 82 7 0 chr17 17179821 17180103 -72324450 - AluY SINE Alu -27 284 1 184 111 0 0 chr17 17180562 17180589 -72323964 + MER5B DNA MER1_type 21 47 -131 941 318 76 12 chr17 17180805 17181305 -72323248 - L2 LINE L2 -894 2420 1889 2302 104 3 0 chr17 17181957 17182266 -72322287 + AluSx SINE Alu 1 310 -2 857 246 79 4 chr17 17183325 17183553 -72321000 + MIR SINE MIR 18 262 0 2048 141 10 7 chr17 17183568 17183873 -72320680 - AluSx SINE Alu -4 308 3 1624 164 22 7 chr17 17183888 17184162 -72320391 - AluJo SINE Alu -14 298 21 209 138 69 52 chr17 17184409 17184467 -72320086 + L3 LINE CR1 939 997 -580 412 287 170 65 chr17 17184555 17184938 -72319615 + L3 LINE CR1 1135 1557 -20 190 297 9 63 chr17 17186124 17186235 -72318318 + MIR SINE MIR 20 124 -138 280 195 98 65 chr17 17186491 17186614 -72317939 + MIR SINE MIR 130 256 -6 21 36 0 0 chr17 17186709 17186737 -72317816 + AT_rich Low_complexity Low_complexity 1 28 0 2034 96 41 24 chr17 17187655 17187946 -72316607 - AluSx SINE Alu -16 296 1 1408 133 44 121 chr17 17187966 17188281 -72316272 - AluJo SINE Alu -17 295 5 2128 138 0 0 chr17 17188295 17188592 -72315961 - AluSx SINE Alu -15 297 1 273 276 76 21 chr17 17188734 17188879 -72315674 - HAL1 LINE L1 -117 2390 2238 1781 168 3 19 chr17 17188893 17189202 -72315351 - AluJo SINE Alu -2 310 7 307 228 114 81 chr17 17189274 17189397 -72315156 - HAL1b LINE L1 -473 875 749 12387 161 54 19 chr17 17189419 17189703 -72314850 + L1P LINE L1 2825 3098 -3048 2071 100 7 4 chr17 17189703 17190012 -72314541 + AluSp SINE Alu 5 314 0 12387 161 54 19 chr17 17190012 17190081 -72314472 + L1P LINE L1 3098 3163 -2983 2289 67 0 51 chr17 17190081 17190393 -72314160 - AluY SINE Alu -15 296 1 12387 161 54 19 chr17 17190393 17192460 -72312093 + L1P LINE L1 3163 5331 -815 787 190 0 15 chr17 17192460 17192597 -72311956 + AluJb SINE Alu 139 273 -39 6114 83 7 23 chr17 17192603 17192717 -72311836 + L1PA13 LINE L1 5317 5431 -732 2055 147 0 7 chr17 17192717 17193017 -72311536 + AluSx SINE Alu 1 298 -14 6114 83 7 23 chr17 17193017 17193762 -72310791 + L1PA13 LINE L1 5431 6162 -1 616 241 0 38 chr17 17193970 17194128 -72310425 + L1MC5 LINE L1 7756 7907 -54 2083 98 25 35 chr17 17194370 17194685 -72309868 - AluSx SINE Alu 0 312 1 330 206 0 0 chr17 17194917 17194990 -72309563 + (TA)n Simple_repeat Simple_repeat 1 73 0 894 160 0 0 chr17 17195078 17195203 -72309350 - FLAM_C SINE Alu -18 125 1 2421 87 3 10 chr17 17196834 17197146 -72307407 + AluSp SINE Alu 1 310 -3 30 0 0 0 chr17 17201231 17201261 -72303292 + AT_rich Low_complexity Low_complexity 1 30 0 1582 172 7 21 chr17 17201261 17201552 -72303001 - AluJo SINE Alu -25 287 1 302 203 0 14 chr17 17201554 17201623 -72302930 - L1ME LINE L1 -454 5667 5600 229 182 0 0 chr17 17202178 17202222 -72302331 + CT-rich Low_complexity Low_complexity 3 46 0 2123 130 0 9 chr17 17202387 17202702 -72301851 + AluSx SINE Alu 1 312 0 219 121 0 0 chr17 17203464 17203497 -72301056 - L2 LINE L2 -2 3311 3279 1028 233 18 18 chr17 17204223 17204446 -72300107 - MER58A DNA MER1_type 0 224 2 632 209 37 0 chr17 17205774 17205908 -72298645 + L1ME3A LINE L1 6032 6170 0 2191 104 7 13 chr17 17206785 17207084 -72297469 - AluSc SINE Alu -12 297 1 685 115 0 26 chr17 17207093 17207206 -72297347 - L1MB3 LINE L1 0 6183 6074 772 290 45 9 chr17 17207669 17207890 -72296663 - MIR SINE MIR -3 259 31 21 0 0 0 chr17 17208173 17208194 -72296359 + AT_rich Low_complexity Low_complexity 1 21 0 1908 105 4 0 chr17 17208817 17209065 -72295488 + AluSp SINE Alu 1 249 -64 1714 143 15 8 chr17 17209068 17209334 -72295219 + AluJb SINE Alu 1 268 -44 551 122 138 49 chr17 17209737 17209860 -72294693 + L1MB3 LINE L1 6048 6181 -2 23 0 0 0 chr17 17211722 17211745 -72292808 + AT_rich Low_complexity Low_complexity 1 23 0 497 352 72 45 chr17 17211794 17212237 -72292316 - L2 LINE L2 -1 3271 2817 2373 64 0 32 chr17 17212935 17213246 -72291307 - AluY SINE Alu -10 301 1 268 325 83 6 chr17 17213365 17213522 -72291031 - MIR SINE MIR -5 257 89 7352 99 45 26 chr17 17214108 17215177 -72289376 + HSMAR1 DNA Mariner 1 1089 -198 1990 119 7 24 chr17 17215184 17215477 -72289076 + AluSx SINE Alu 1 288 -24 835 171 0 11 chr17 17215515 17215690 -72288863 + G-rich Low_complexity Low_complexity 5 177 0 200 154 77 0 chr17 17215690 17215729 -72288824 + A-rich Low_complexity Low_complexity 4 45 0 1359 100 42 0 chr17 17215729 17215919 -72288634 + HSMAR1 DNA Mariner 1090 1287 0 2471 72 0 0 chr17 17216650 17216943 -72287610 - AluSg SINE Alu -17 293 1 317 229 21 42 chr17 17217070 17217166 -72287387 - MER5A DNA MER1_type -83 106 13 261 299 42 69 chr17 17217166 17217310 -72287243 + MER5A DNA MER1_type 27 166 -23 * 739 252 6 0 chr17 17217185 17217344 -72287209 - MER5A DNA MER1_type -29 160 1 24 53 0 0 chr17 17218397 17218435 -72286118 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr17 17218887 17218909 -72285644 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 17218971 17218994 -72285559 + AT_rich Low_complexity Low_complexity 1 23 0 373 182 40 50 chr17 17219144 17219243 -72285310 + L1ME2 LINE L1 2 99 -6443 812 127 0 0 chr17 17219265 17219383 -72285170 - AluSg/x SINE Alu 0 309 192 4990 205 70 42 chr17 17219383 17220502 -72284051 + L1ME2 LINE L1 83 1241 -5301 1421 208 32 23 chr17 17220502 17220810 -72283743 + AluJo SINE Alu 1 311 -1 4990 205 70 42 chr17 17220810 17220916 -72283637 + L1ME2 LINE L1 1241 1343 -5199 482 296 38 13 chr17 17220931 17221090 -72283463 + L1ME2 LINE L1 4455 4617 -2027 1744 87 0 13 chr17 17221095 17221324 -72283229 + AluSc SINE Alu 76 301 -8 650 141 0 0 chr17 17221324 17221410 -72283143 + AluJo/FRAM SINE Alu 163 248 -64 481 220 165 11 chr17 17221452 17221634 -72282919 + L1ME2 LINE L1 4897 5106 -1538 207 100 0 0 chr17 17221996 17222026 -72282527 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 2918 209 109 18 chr17 17222524 17223893 -72280660 + L1ME2 LINE L1 5121 6607 -55 350 340 77 6 chr17 17226498 17226654 -72277899 - L1M4 LINE L1 -1824 4322 4156 392 201 227 46 chr17 17226723 17226917 -72277636 - MIR SINE MIR -33 229 1 488 256 29 17 chr17 17229372 17229513 -72275040 - MIR SINE MIR -64 144 45 1653 137 30 19 chr17 17230285 17230548 -72274005 + AluSx SINE Alu 9 274 -38 441 0 0 0 chr17 17230717 17230766 -72273787 + (TA)n Simple_repeat Simple_repeat 1 49 0 2159 128 0 16 chr17 17230766 17231072 -72273481 - AluSx SINE Alu -10 302 2 600 274 102 30 chr17 17231073 17231376 -72273177 + L2 LINE L2 2184 2508 -806 1587 153 33 43 chr17 17231973 17232274 -72272279 - AluJo SINE Alu -14 298 1 5336 79 24 60 chr17 17232615 17233505 -72271048 + SVA Other Other 9 866 -520 5700 46 45 25 chr17 17233768 17234504 -72270049 + SVA Other Other 635 1385 -1 1119 152 52 0 chr17 17235028 17235239 -72269314 + L1MB2 LINE L1 5707 5928 -255 526 241 53 23 chr17 17235300 17235433 -72269120 + MER21B LTR ERV1 60 196 -667 370 150 39 127 chr17 17235457 17235567 -72268986 - FLAM_A SINE Alu -27 106 21 2107 204 51 62 chr17 17235568 17236201 -72268352 + MER21B LTR ERV1 184 809 -54 749 199 51 51 chr17 17236218 17236454 -72268099 + L1MB2 LINE L1 5929 6164 -7 567 188 30 0 chr17 17236886 17236987 -72267566 + U6 snRNA snRNA 1 104 -3 372 357 13 9 chr17 17237156 17237411 -72267142 + Charlie8 DNA MER1_type 38 1390 -1027 21 0 0 0 chr17 17238402 17238423 -72266130 + AT_rich Low_complexity Low_complexity 1 21 0 2167 115 7 0 chr17 17238542 17238837 -72265716 + AluSx SINE Alu 2 298 -14 406 184 31 0 chr17 17240355 17240453 -72264100 - MER33 DNA MER1_type 0 324 224 1279 95 0 22 chr17 17240457 17240636 -72263917 - AluSp SINE Alu -9 304 130 810 155 38 66 chr17 17240646 17240781 -72263772 - MER33 DNA MER1_type -2373 212 84 2162 112 0 0 chr17 17240781 17241076 -72263477 - AluSx SINE Alu -17 295 1 810 155 38 66 chr17 17241076 17241153 -72263400 - MER33 DNA MER1_type -2501 84 6 591 315 162 43 chr17 17241267 17241916 -72262637 + L2 LINE L2 2292 3100 -213 1806 121 61 0 chr17 17241916 17242180 -72262373 + AluSp SINE Alu 1 280 -33 591 315 162 43 chr17 17242180 17242414 -72262139 + L2 LINE L2 3100 3305 -8 24 32 0 0 chr17 17242459 17242490 -72262063 + AT_rich Low_complexity Low_complexity 1 31 0 1037 279 118 23 chr17 17242518 17242671 -72261882 - L2 LINE L2 0 3313 3176 1717 170 7 17 chr17 17242671 17242971 -72261582 + AluJo SINE Alu 1 297 -15 1037 279 118 23 chr17 17242971 17243416 -72261137 - L2 LINE L2 -137 3176 2662 1147 178 0 33 chr17 17243418 17243632 -72260921 + AluJo SINE Alu 106 312 0 431 279 32 25 chr17 17243734 17243892 -72260661 - L2 LINE L2 -900 2414 2256 279 0 0 0 chr17 17243903 17243934 -72260619 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2169 106 0 0 chr17 17244000 17244312 -72260241 + AluSq SINE Alu 1 312 0 270 0 0 0 chr17 17245037 17245067 -72259486 + (TA)n Simple_repeat Simple_repeat 2 31 0 2512 48 7 10 chr17 17245067 17245377 -72259176 - AluY SINE Alu -2 309 1 1451 207 35 29 chr17 17245409 17245785 -72258768 + MLT1B LTR MaLR 1 378 -12 221 196 0 0 chr17 17246772 17246818 -72257735 + L2 LINE L2 3268 3313 0 23 68 0 0 chr17 17247415 17247459 -72257094 + AT_rich Low_complexity Low_complexity 1 44 0 436 266 82 88 chr17 17247485 17247839 -72256714 - L1ME4a LINE L1 -79 6042 5691 2299 102 0 0 chr17 17247919 17248214 -72256339 - AluSg1 SINE Alu -14 295 1 1680 180 14 3 chr17 17248269 17248564 -72255989 + AluJb SINE Alu 15 312 0 341 221 0 0 chr17 17249152 17249229 -72255324 - FLAM_A SINE Alu 0 133 57 2144 112 0 31 chr17 17249502 17249824 -72254729 + AluSx SINE Alu 1 312 0 512 243 29 86 chr17 17249824 17250034 -72254519 + MLT2D LTR ERVL 217 414 0 2328 100 0 0 chr17 17250041 17250351 -72254202 - AluY SINE Alu -1 310 1 4364 190 49 65 chr17 17250617 17250679 -72253874 - Charlie1a DNA MER1_type -1312 1449 1388 2263 92 17 0 chr17 17250679 17250971 -72253582 - AluSc SINE Alu -12 297 1 4364 190 49 65 chr17 17250971 17251095 -72253458 - Charlie1a DNA MER1_type -1373 1388 1264 2269 89 0 17 chr17 17251095 17251397 -72253156 - AluY SINE Alu -14 297 1 4364 190 49 65 chr17 17251397 17251793 -72252760 - Charlie1a DNA MER1_type -1497 1264 863 2360 108 0 0 chr17 17251793 17252099 -72252454 + AluSx SINE Alu 1 306 -6 4364 190 49 65 chr17 17252099 17252169 -72252384 - Charlie1a DNA MER1_type -1898 863 793 2284 101 32 61 chr17 17252169 17252544 -72252009 - THE1B LTR MaLR 0 364 1 11609 95 14 0 chr17 17252544 17254102 -72250451 - THE1B-int LTR MaLR 0 1580 2 2248 121 30 28 chr17 17254103 17254466 -72250087 - THE1B LTR MaLR 0 364 1 4364 190 49 65 chr17 17254466 17255234 -72249319 - Charlie1a DNA MER1_type -1966 795 45 180 0 0 0 chr17 17255697 17255717 -72248836 + (A)n Simple_repeat Simple_repeat 1 20 0 2129 116 3 0 chr17 17255723 17256007 -72248546 + AluSx SINE Alu 1 285 -27 218 311 14 0 chr17 17256761 17256835 -72247718 + (TA)n Simple_repeat Simple_repeat 2 76 0 296 252 0 28 chr17 17257062 17257150 -72247403 - MIR SINE MIR -115 93 9 225 0 0 0 chr17 17258168 17258193 -72246360 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 299 327 93 23 chr17 17258324 17258624 -72245929 + L2 LINE L2 2550 2870 -444 444 304 75 60 chr17 17258703 17258969 -72245584 + L1ME1 LINE L1 5550 5819 -302 218 297 40 54 chr17 17259817 17259891 -72244662 + MIR3 SINE MIR 105 177 -31 936 234 63 13 chr17 17260014 17260253 -72244300 + MIR SINE MIR 12 262 0 334 319 143 49 chr17 17260614 17260808 -72243745 + L2 LINE L2 1883 2057 -1257 1700 174 41 10 chr17 17260808 17261101 -72243452 - AluJb SINE Alu -4 308 7 334 319 143 49 chr17 17261101 17261605 -72242948 + L2 LINE L2 2057 2647 -667 1262 203 95 16 chr17 17262421 17262736 -72241817 + L1ME1 LINE L1 5810 6149 -17 2190 122 3 0 chr17 17263264 17263568 -72240985 + AluSx SINE Alu 1 305 -7 2378 83 7 0 chr17 17263605 17263905 -72240648 + AluY SINE Alu 1 302 -9 1814 125 69 10 chr17 17263910 17264213 -72240340 + L1PB4 LINE L1 5834 6154 -2 25 65 0 0 chr17 17264213 17264259 -72240294 + AT_rich Low_complexity Low_complexity 1 46 0 408 200 0 0 chr17 17264270 17264370 -72240183 + CT-rich Low_complexity Low_complexity 2 101 0 1044 170 43 25 chr17 17265059 17265294 -72239259 + MER44D DNA MER2_type 1 509 -100 423 194 0 0 chr17 17265294 17265387 -72239166 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 995 143 11 0 chr17 17265396 17265571 -72238982 + (TATG)n Simple_repeat Simple_repeat 2 178 0 307 292 0 0 chr17 17265571 17265651 -72238902 + L1MC4 LINE L1 6621 6703 -1339 241 315 0 0 chr17 17265671 17265760 -72238793 - L1MC4 LINE L1 -1339 6703 6615 339 300 0 0 chr17 17265791 17265881 -72238672 + L1MC4 LINE L1 6614 6703 -1339 273 197 0 0 chr17 17265882 17265943 -72238610 + (TA)n Simple_repeat Simple_repeat 2 62 0 599 124 11 0 chr17 17265947 17266036 -72238517 + MER44D DNA MER2_type 514 603 -2 830 183 0 14 chr17 17266036 17266178 -72238375 - AluJo/FRAM SINE Alu -16 296 157 465 193 12 0 chr17 17266178 17266261 -72238292 - AluS SINE Alu -228 84 1 232 338 95 65 chr17 17266346 17266746 -72237807 + L2 LINE L2 2856 3267 -5 1994 151 0 22 chr17 17268852 17269169 -72235384 - AluJb SINE Alu 0 312 3 1514 145 6 116 chr17 17269171 17269508 -72235045 - AluJb SINE Alu -2 300 1 298 300 70 45 chr17 17269988 17270190 -72234363 - MIR SINE MIR 0 262 55 342 138 0 38 chr17 17271059 17271139 -72233414 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 2041 167 0 0 chr17 17271139 17271451 -72233102 - AluSx SINE Alu 0 312 1 1640 230 108 38 chr17 17271804 17272325 -72232228 + L2 LINE L2 2235 2791 -523 2507 66 0 0 chr17 17273060 17273365 -72231188 + AluY SINE Alu 1 305 -6 270 291 166 20 chr17 17273602 17273877 -72230676 + L2 LINE L2 1658 2015 -1299 1861 146 0 23 chr17 17274371 17274672 -72229881 - AluJo SINE Alu -16 296 3 2430 74 0 10 chr17 17274707 17275023 -72229530 + AluSc SINE Alu 1 313 0 26 88 0 0 chr17 17275294 17275362 -72229191 + AT_rich Low_complexity Low_complexity 1 68 0 22 35 0 0 chr17 17275633 17275662 -72228891 + AT_rich Low_complexity Low_complexity 1 29 0 752 68 29 10 chr17 17275952 17276055 -72228498 - U6 snRNA snRNA -2 105 1 2157 130 0 0 chr17 17276485 17276786 -72227767 + AluSx SINE Alu 1 301 -11 348 296 70 14 chr17 17276830 17276972 -72227581 - MER5B DNA MER1_type -27 151 2 21 0 0 0 chr17 17277168 17277189 -72227364 + AT_rich Low_complexity Low_complexity 1 21 0 1575 162 6 88 chr17 17278565 17278714 -72225839 + AluJb SINE Alu 2 112 -200 2056 121 0 0 chr17 17278714 17279023 -72225530 + AluSx SINE Alu 1 309 0 1575 162 6 88 chr17 17279023 17279200 -72225353 + AluJb SINE Alu 112 302 -10 378 304 39 0 chr17 17279881 17279983 -72224570 + L2 LINE L2 3204 3309 -4 630 286 65 23 chr17 17279994 17280211 -72224342 + MIR SINE MIR 3 228 -34 21 0 0 0 chr17 17282553 17282574 -72221979 + AT_rich Low_complexity Low_complexity 1 21 0 1297 91 29 38 chr17 17282627 17282837 -72221716 - L1PA13 LINE L1 -4 6159 5952 231 114 57 29 chr17 17282891 17282961 -72221592 + CT-rich Low_complexity Low_complexity 2 73 0 8786 84 21 67 chr17 17283056 17284506 -72220047 + SVA Other Other 3 1386 0 268 181 48 7 chr17 17285174 17285251 -72219302 - L1PA8A LINE L1 -350 5771 5695 2164 99 48 0 chr17 17285311 17285605 -72218948 + AluSg SINE Alu 1 308 -2 2174 103 7 0 chr17 17286005 17286296 -72218257 - AluSp SINE Alu -17 296 4 243 0 0 0 chr17 17286846 17286873 -72217680 + (A)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr17 17287475 17287499 -72217054 + (TA)n Simple_repeat Simple_repeat 2 25 0 39 22 0 0 chr17 17289204 17289250 -72215303 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr17 17289378 17289401 -72215152 + AT_rich Low_complexity Low_complexity 1 23 0 5859 46 1 3 chr17 17290341 17291059 -72213494 - L1PA6 LINE L1 -6 6148 5432 965 200 0 0 chr17 17292207 17292372 -72212181 - FRAM SINE Alu 0 166 2 214 357 57 0 chr17 17292544 17292614 -72211939 - L2 LINE L2 -16 3256 3183 2229 117 3 0 chr17 17293252 17293552 -72211001 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 17293553 17293580 -72210973 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 261 14 14 chr17 17294180 17294193 -72210360 + A-rich Low_complexity Low_complexity 3 15 -129 653 205 31 0 chr17 17294193 17294320 -72210233 + FLAM_C SINE Alu 1 131 -2 239 261 14 14 chr17 17294320 17294336 -72210217 + A-rich Low_complexity Low_complexity 15 30 -114 2087 151 0 0 chr17 17294336 17294647 -72209906 + AluSx SINE Alu 1 311 -1 239 261 14 14 chr17 17294647 17294758 -72209795 + A-rich Low_complexity Low_complexity 29 144 0 228 237 145 61 chr17 17295244 17295375 -72209178 + Charlie8 DNA MER1_type 6 147 -2270 180 0 0 0 chr17 17295641 17295661 -72208892 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 211 298 32 21 chr17 17295921 17296015 -72208538 - L3 LINE CR1 -170 1407 1313 2153 118 0 3 chr17 17296159 17296456 -72208097 - AluSx SINE Alu -16 296 1 23 78 0 0 chr17 17296692 17296743 -72207810 + AT_rich Low_complexity Low_complexity 1 51 0 2445 82 3 0 chr17 17297314 17297618 -72206935 + AluSp SINE Alu 1 305 -8 2149 90 31 7 chr17 17298024 17298314 -72206239 - AluSx SINE Alu -15 297 1 299 195 24 37 chr17 17298348 17298430 -72206123 + MIR SINE MIR 128 208 -54 358 281 21 10 chr17 17298480 17298576 -72205977 + L2 LINE L2 3213 3309 -4 2010 132 3 3 chr17 17298692 17298981 -72205572 + AluSx SINE Alu 1 289 -23 300 95 48 0 chr17 17299065 17299107 -72205446 + MER57A LTR ERV1 295 338 -65 29 0 0 0 chr17 17299108 17299137 -72205416 + AT_rich Low_complexity Low_complexity 1 29 0 435 19 0 0 chr17 17299403 17299455 -72205098 + (CA)n Simple_repeat Simple_repeat 2 53 0 2195 93 3 22 chr17 17299466 17299778 -72204775 - AluSq SINE Alu -7 306 1 24 32 0 0 chr17 17299820 17299851 -72204702 + AT_rich Low_complexity Low_complexity 1 31 0 230 295 85 62 chr17 17300044 17300173 -72204380 - MIR SINE MIR -19 243 112 21 0 0 0 chr17 17300271 17300292 -72204261 + AT_rich Low_complexity Low_complexity 1 21 0 647 267 95 22 chr17 17300309 17300624 -72203929 + L1MEd LINE L1 1193 1530 -4886 327 317 82 16 chr17 17300625 17300808 -72203745 + L1MEd LINE L1 1381 1575 -4851 253 254 57 86 chr17 17300845 17301054 -72203499 + L1MEd LINE L1 1829 2031 -4576 3861 186 50 9 chr17 17301215 17302287 -72202266 + L1MB7 LINE L1 4997 6108 -76 1030 102 0 20 chr17 17302294 17302441 -72202112 + AluSc SINE Alu 152 295 -14 330 283 141 36 chr17 17302667 17302894 -72201659 + L1ME3A LINE L1 5426 5681 -481 331 235 206 35 chr17 17302927 17303097 -72201456 + L1ME3A LINE L1 5751 5949 -221 228 293 0 67 chr17 17304462 17304581 -72199972 - Tigger1 DNA MER2_type -1337 1081 972 2239 110 0 3 chr17 17304581 17304881 -72199672 + AluSg SINE Alu 1 299 -11 228 293 0 67 chr17 17304881 17304911 -72199642 - Tigger1 DNA MER2_type -1446 972 942 183 219 0 49 chr17 17305313 17305354 -72199199 - MER5B DNA MER1_type -126 52 14 184 200 0 0 chr17 17305322 17305352 -72199201 + MER5A DNA MER1_type 145 174 -15 230 204 0 37 chr17 17305447 17305501 -72199052 - L2 LINE L2 -69 3244 3193 313 305 26 111 chr17 17305506 17305762 -72198791 + L1ME LINE L1 4918 5138 -1008 2334 93 0 0 chr17 17305762 17306062 -72198491 + AluSx SINE Alu 3 302 -10 313 305 26 111 chr17 17306062 17306156 -72198397 + L1ME LINE L1 5138 5238 -908 487 271 102 62 chr17 17306164 17306380 -72198173 + L1ME LINE L1 5283 5522 -599 2386 86 0 0 chr17 17306380 17306683 -72197870 - AluSq SINE Alu -10 303 1 487 271 102 62 chr17 17306683 17306850 -72197703 + L1ME LINE L1 5522 5681 -440 2225 97 24 0 chr17 17306871 17307161 -72197392 + AluSx SINE Alu 1 297 -15 293 148 37 19 chr17 17307391 17307445 -72197108 + MER66B LTR ERV1 290 344 -142 202 238 50 20 chr17 17307448 17307549 -72197004 + A-rich Low_complexity Low_complexity 2 105 0 254 270 159 24 chr17 17307763 17307889 -72196664 + MIR3 SINE MIR 15 157 -51 445 237 128 13 chr17 17308179 17308290 -72196263 - L1MC4 LINE L1 -4 8038 7903 279 0 0 0 chr17 17308290 17308321 -72196232 + (TG)n Simple_repeat Simple_repeat 2 32 0 445 237 128 13 chr17 17308321 17308365 -72196188 - L1MC4 LINE L1 -139 7903 7865 267 270 34 34 chr17 17308627 17308716 -72195837 - L2 LINE L2 0 3313 3225 2366 71 0 26 chr17 17308735 17309044 -72195509 + AluSg SINE Alu 1 301 -9 941 104 115 95 chr17 17309149 17309429 -72195124 + L1MA9 LINE L1 6025 6307 -5 1292 90 6 0 chr17 17310387 17310553 -72194000 + AluSq SINE Alu 132 298 -15 1586 127 65 0 chr17 17311158 17311403 -72193150 - AluSx SINE Alu -51 261 1 2053 224 42 28 chr17 17311522 17311831 -72192722 + L1M4 LINE L1 4072 4375 -1771 2037 116 3 7 chr17 17311831 17312125 -72192428 + AluSp SINE Alu 2 294 -19 2053 224 42 28 chr17 17312125 17312499 -72192054 + L1M4 LINE L1 4375 4765 -1381 24 32 0 0 chr17 17312827 17312858 -72191695 + AT_rich Low_complexity Low_complexity 1 31 0 1240 160 21 21 chr17 17312982 17313219 -72191334 + L1M4 LINE L1 5549 5785 -393 1799 119 13 36 chr17 17313268 17313570 -72190983 + AluSx SINE Alu 1 295 -17 1090 206 33 5 chr17 17313792 17314006 -72190547 + AluJo SINE Alu 2 221 -91 1328 253 98 46 chr17 17314033 17314117 -72190436 - HAL1b LINE L1 -634 714 636 2335 109 0 6 chr17 17314117 17314429 -72190124 + AluSp SINE Alu 1 310 -3 1328 253 98 46 chr17 17314429 17314441 -72190112 - HAL1b LINE L1 -712 636 626 2031 124 0 0 chr17 17314441 17314751 -72189802 - AluSx SINE Alu 0 310 1 1328 253 98 46 chr17 17314751 17315265 -72189288 - HAL1b LINE L1 -722 626 70 2089 108 24 0 chr17 17316111 17316398 -72188155 + AluSq SINE Alu 2 295 -18 2312 108 0 0 chr17 17316400 17316737 -72187816 + AluY SINE Alu 1 337 0 21 0 0 31 chr17 17316987 17317005 -72187548 + AT_rich Low_complexity Low_complexity 1 19 -12 1643 177 17 10 chr17 17317005 17317293 -72187260 + AluSx SINE Alu 1 290 -22 21 0 0 31 chr17 17317293 17317306 -72187247 + AT_rich Low_complexity Low_complexity 19 31 0 1751 224 12 29 chr17 17317434 17317916 -72186637 + L1MA9 LINE L1 3271 3744 -2402 745 60 4 2 chr17 17317916 17318166 -72186387 + AluY SINE Alu 1 307 -4 712 199 0 13 chr17 17318166 17318317 -72186236 + L1MA9 LINE L1 3735 3883 -2263 * 3641 188 69 42 chr17 17318307 17318655 -72185898 + L1MA9 LINE L1 5336 5673 -639 1892 164 10 0 chr17 17318655 17318947 -72185606 + AluJb SINE Alu 5 299 -13 3641 188 69 42 chr17 17318947 17319059 -72185494 + L1MA9 LINE L1 5673 5780 -532 2231 125 0 0 chr17 17319059 17319363 -72185190 + AluSx SINE Alu 1 304 -8 453 116 0 0 chr17 17319368 17319437 -72185116 + (TG)n Simple_repeat Simple_repeat 2 70 0 3641 188 69 42 chr17 17319437 17319883 -72184670 + L1MA9 LINE L1 5783 6274 -38 380 204 21 65 chr17 17319902 17319995 -72184558 - MER58 DNA MER1_type -2331 89 1 1647 240 82 26 chr17 17320111 17320625 -72183928 + Charlie2 DNA MER1_type 1882 2445 -417 2369 87 7 0 chr17 17320625 17320934 -72183619 - AluY SINE Alu 0 311 1 1647 240 82 26 chr17 17320934 17321098 -72183455 + Charlie2 DNA MER1_type 2445 2598 -264 5867 178 31 56 chr17 17321106 17323569 -72180984 + L1MA9 LINE L1 3881 6276 -36 2090 148 3 3 chr17 17323584 17323895 -72180658 + AluSx SINE Alu 1 311 -1 1387 137 121 20 chr17 17323901 17324149 -72180404 + AluJb SINE Alu 36 308 -4 195 313 16 16 chr17 17324265 17324329 -72180224 - MIR SINE MIR -96 166 103 498 219 164 27 chr17 17324331 17324477 -72180076 - MER5B DNA MER1_type 0 178 13 21 36 0 0 chr17 17324647 17324675 -72179878 + AT_rich Low_complexity Low_complexity 1 28 0 2240 198 40 60 chr17 17325451 17325804 -72178749 + L1MB7 LINE L1 5601 5939 -245 1786 167 30 16 chr17 17325804 17326109 -72178444 + AluJo SINE Alu 1 309 -3 2240 198 40 60 chr17 17326109 17326351 -72178202 + L1MB7 LINE L1 5939 6184 0 2076 130 0 3 chr17 17326512 17326805 -72177748 + AluSg SINE Alu 1 292 -18 2227 114 0 0 chr17 17326925 17327224 -72177329 + AluSx SINE Alu 1 299 -13 26 0 0 0 chr17 17327250 17327276 -72177277 + AT_rich Low_complexity Low_complexity 1 26 0 1963 164 0 0 chr17 17327294 17327593 -72176960 + AluSx SINE Alu 1 299 -13 381 300 73 60 chr17 17327814 17328133 -72176420 + HAL1 LINE L1 1285 1611 -896 1735 199 10 0 chr17 17328133 17328439 -72176114 + AluJo SINE Alu 1 309 -3 381 300 73 60 chr17 17328439 17328516 -72176037 + HAL1 LINE L1 1611 1686 -821 2320 77 10 23 chr17 17328523 17328823 -72175730 - AluY SINE Alu -15 296 1 628 312 85 54 chr17 17328906 17329662 -72174891 + L1ME1 LINE L1 37 815 -5581 567 258 76 55 chr17 17329653 17330014 -72174539 + L1ME1 LINE L1 1038 1411 -4985 * 1680 172 3 68 chr17 17330014 17330352 -72174201 + 7SLRNA srpRNA srpRNA 1 316 -4 567 258 76 55 chr17 17330352 17330412 -72174141 + L1ME1 LINE L1 1411 1468 -4928 897 155 0 7 chr17 17330414 17330556 -72173997 + AluSq/x SINE Alu 1 141 -172 2216 110 0 0 chr17 17330556 17330847 -72173706 + AluSx SINE Alu 1 291 -21 244 242 0 0 chr17 17330848 17330910 -72173643 + L1ME1 LINE L1 5205 5266 -949 947 241 137 71 chr17 17330938 17331405 -72173148 + L1ME1 LINE L1 5746 6228 -3 2313 101 0 7 chr17 17331417 17331715 -72172838 - AluSq SINE Alu -17 296 1 551 214 65 18 chr17 17331800 17331968 -72172585 + L1M4 LINE L1 3927 4102 -2044 186 289 19 0 chr17 17333070 17333122 -72171431 + L2 LINE L2 3217 3269 -3 2338 110 3 0 chr17 17333372 17333682 -72170871 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr17 17334138 17334173 -72170380 + AT_rich Low_complexity Low_complexity 1 35 0 200 191 29 15 chr17 17334287 17334355 -72170198 + (TA)n Simple_repeat Simple_repeat 2 70 0 21 0 0 0 chr17 17334509 17334530 -72170023 + AT_rich Low_complexity Low_complexity 1 21 0 1427 158 15 125 chr17 17334570 17334726 -72169827 + AluJb SINE Alu 1 102 -200 2510 77 0 0 chr17 17334726 17335037 -72169516 + AluY SINE Alu 1 311 0 1427 158 15 125 chr17 17335037 17335216 -72169337 + AluJb SINE Alu 102 299 -3 1866 123 46 3 chr17 17335235 17335520 -72169033 + AluSg SINE Alu 1 297 -13 28 0 0 0 chr17 17335544 17335572 -72168981 + AT_rich Low_complexity Low_complexity 1 28 0 201 296 104 9 chr17 17335720 17335835 -72168718 - MIR3 SINE MIR -42 166 41 261 284 162 45 chr17 17336102 17336258 -72168295 - L1MC4a LINE L1 -1775 6033 5842 2515 69 0 3 chr17 17336258 17336561 -72167992 + AluY SINE Alu 1 302 -9 261 284 162 45 chr17 17336561 17336626 -72167927 - L1MC4a LINE L1 -1966 5842 5786 2522 67 7 0 chr17 17336626 17336923 -72167630 + AluSp SINE Alu 1 299 -14 252 0 0 0 chr17 17337399 17337427 -72167126 + (CA)n Simple_repeat Simple_repeat 2 29 0 2213 111 0 35 chr17 17338388 17338704 -72165849 + AluSc SINE Alu 1 305 -4 1922 157 3 0 chr17 17339499 17339786 -72164767 + AluSx SINE Alu 1 288 -24 2290 104 0 16 chr17 17339990 17340127 -72164426 + AluSx SINE Alu 1 139 -173 2345 98 3 0 chr17 17340127 17340434 -72164119 + AluSg SINE Alu 1 308 -2 2290 104 0 16 chr17 17340434 17340605 -72163948 + AluSx SINE Alu 139 304 -8 288 0 0 0 chr17 17341223 17341255 -72163298 + (CA)n Simple_repeat Simple_repeat 2 33 0 607 267 110 48 chr17 17341282 17341846 -72162707 + L2 LINE L2 2588 3204 -109 286 205 80 152 chr17 17342041 17342455 -72162098 + L1MC/D LINE L1 4549 4932 -1214 280 228 8 94 chr17 17342423 17342550 -72162003 + L1P LINE L1 4901 5016 -1130 * 406 185 0 37 chr17 17342948 17343029 -72161524 - MIR SINE MIR -105 157 80 2179 121 3 0 chr17 17343121 17343428 -72161125 + AluSp SINE Alu 1 308 -5 563 319 74 30 chr17 17343431 17343523 -72161030 + L1MC/D LINE L1 5265 5351 -2457 2328 109 6 0 chr17 17343523 17343834 -72160719 + AluSq SINE Alu 1 313 0 2443 93 3 0 chr17 17343838 17344148 -72160405 + AluSp SINE Alu 1 311 -2 563 319 74 30 chr17 17344148 17344457 -72160096 + L1MC/D LINE L1 5353 5689 -2119 2297 111 0 0 chr17 17344570 17344867 -72159686 - AluSx SINE Alu -14 298 2 2558 65 7 0 chr17 17345642 17345951 -72158602 + AluY SINE Alu 1 311 0 2450 68 0 58 chr17 17346214 17346540 -72158013 - AluSc SINE Alu -2 307 1 1533 181 52 7 chr17 17346753 17347040 -72157513 + AluJo SINE Alu 3 302 -10 754 148 7 49 chr17 17347623 17347765 -72156788 + FLAM_C SINE Alu 2 137 -6 2137 128 10 0 chr17 17347852 17348142 -72156411 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr17 17348253 17348274 -72156279 + AT_rich Low_complexity Low_complexity 1 21 0 2212 97 3 3 chr17 17348284 17348572 -72155981 + AluSp SINE Alu 1 288 -25 21 36 0 0 chr17 17348578 17348606 -72155947 + AT_rich Low_complexity Low_complexity 1 28 0 2443 76 0 7 chr17 17348912 17349213 -72155340 - AluY SINE Alu -12 299 1 195 305 84 42 chr17 17349305 17349400 -72155153 + MIR3 SINE MIR 67 165 -43 1433 170 101 17 chr17 17349427 17349715 -72154838 - AluJb SINE Alu 0 312 1 2217 91 37 7 chr17 17350178 17350474 -72154079 + AluSg SINE Alu 1 305 -5 1734 147 56 3 chr17 17350972 17351257 -72153296 + AluJb SINE Alu 1 300 -12 2403 72 10 3 chr17 17351393 17351699 -72152854 + AluY SINE Alu 1 308 -3 392 227 57 43 chr17 17351853 17351994 -72152559 - MIR SINE MIR -43 219 77 202 159 0 45 chr17 17353663 17353707 -72150846 + (CCG)n Simple_repeat Simple_repeat 2 43 0 2004 115 10 0 chr17 17354401 17354696 -72149857 + AluSx SINE Alu 1 298 -14 2398 56 28 0 chr17 17354697 17354984 -72149569 + AluSg SINE Alu 1 295 -15 401 206 56 9 chr17 17356285 17356392 -72148161 + L1MB7 LINE L1 6071 6182 -2 386 294 37 0 chr17 17356510 17356619 -72147934 - L2 LINE L2 -1 3312 3200 2280 103 7 3 chr17 17356860 17357162 -72147391 - AluSx SINE Alu -9 303 1 1970 85 68 48 chr17 17357248 17357542 -72147011 - AluY SINE Alu -11 300 1 1956 151 17 0 chr17 17357746 17358045 -72146508 - AluSx SINE Alu -8 304 1 2318 84 0 0 chr17 17358250 17358535 -72146018 + AluSc SINE Alu 1 285 -24 2262 101 7 3 chr17 17358663 17358970 -72145583 - AluSx SINE Alu -4 308 1 1041 124 0 0 chr17 17358970 17359115 -72145438 - AluSq/x SINE Alu -168 145 1 604 174 9 9 chr17 17359533 17359633 -72144920 - AluJo/FRAM SINE Alu -75 237 135 2001 132 27 10 chr17 17359633 17359799 -72144754 - AluSx SINE Alu -11 301 126 2242 96 20 3 chr17 17359799 17360101 -72144452 - AluSg SINE Alu -3 307 1 2001 132 27 10 chr17 17360101 17360230 -72144323 - AluSx SINE Alu -186 126 1 417 248 54 16 chr17 17360626 17360755 -72143798 - MIR SINE MIR -70 192 59 2128 144 0 0 chr17 17360912 17361224 -72143329 + AluSx SINE Alu 1 312 0 181 319 14 0 chr17 17361409 17361478 -72143075 - L2 LINE L2 -557 2757 2688 2234 110 0 0 chr17 17361479 17361769 -72142784 + AluSg SINE Alu 1 290 -20 935 126 0 15 chr17 17361780 17361915 -72142638 + FLAM_C SINE Alu 1 133 0 2107 104 0 28 chr17 17362117 17362405 -72142148 + AluSc SINE Alu 1 280 -29 1750 127 4 4 chr17 17362545 17362789 -72141764 - AluSx SINE Alu -68 244 1 2173 106 0 0 chr17 17362855 17363138 -72141415 - AluY SINE Alu -28 283 1 317 232 46 53 chr17 17363143 17363294 -72141259 - L1M4 LINE L1 -1538 4608 4459 242 218 152 30 chr17 17363381 17363546 -72141007 - L1MEd LINE L1 -5235 884 700 1609 80 0 14 chr17 17363562 17363774 -72140779 - AluY SINE Alu -3 308 100 269 59 0 0 chr17 17363776 17363810 -72140743 - AluY SINE Alu -266 34 1 193 28 0 56 chr17 17363810 17363846 -72140707 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 286 323 75 8 chr17 17363889 17364022 -72140531 - L1MEd LINE L1 -5501 618 477 239 217 0 0 chr17 17364024 17364070 -72140483 - MLT1G1 LTR MaLR -16 526 481 1042 183 59 9 chr17 17364087 17364306 -72140247 + AluJo SINE Alu 7 236 -76 845 265 217 12 chr17 17364399 17364802 -72139751 - MLT1G1 LTR MaLR -124 466 1 337 291 47 12 chr17 17365082 17365254 -72139299 - L1MEd LINE L1 -5936 183 6 2349 84 3 19 chr17 17365281 17365591 -72138962 - AluSx SINE Alu -5 307 3 2455 90 7 0 chr17 17365751 17366061 -72138492 - AluSp SINE Alu -1 312 1 3996 160 44 46 chr17 17366191 17366233 -72138320 - L1MB4 LINE L1 -6 6174 6133 2283 95 0 20 chr17 17366233 17366539 -72138014 - AluSq SINE Alu -12 301 2 262 24 71 0 chr17 17366540 17366582 -72137971 + T-rich Low_complexity Low_complexity 2 46 0 2452 38 0 14 chr17 17366582 17366869 -72137684 - AluY SINE Alu -27 284 2 3996 160 44 46 chr17 17366869 17367171 -72137382 - L1MB4 LINE L1 -46 6134 5833 1821 168 0 20 chr17 17367171 17367468 -72137085 + AluJo SINE Alu 1 291 -21 3996 160 44 46 chr17 17367468 17367507 -72137046 - L1MB4 LINE L1 -347 5833 5795 240 111 0 0 chr17 17367507 17367543 -72137010 + (TA)n Simple_repeat Simple_repeat 1 36 0 3996 160 44 46 chr17 17367543 17368018 -72136535 - L1MB4 LINE L1 -385 5795 5313 2470 83 0 3 chr17 17368041 17368343 -72136210 - AluSc SINE Alu -8 301 1 622 307 58 0 chr17 17368400 17368641 -72135912 + LTR33A LTR ERVL 262 516 -7 1005 151 0 42 chr17 17368805 17368971 -72135582 - AluSc SINE Alu -16 293 135 27 49 0 0 chr17 17369044 17369085 -72135468 + AT_rich Low_complexity Low_complexity 1 41 0 632 149 52 67 chr17 17369257 17369391 -72135162 - FLAM_C SINE Alu 0 133 2 1868 170 0 22 chr17 17369405 17369722 -72134831 - AluJo SINE Alu -2 310 1 23 33 0 0 chr17 17369769 17369799 -72134754 + AT_rich Low_complexity Low_complexity 1 30 0 289 199 185 7 chr17 17370016 17370162 -72134391 - Charlie7 DNA MER1_type -1 2611 2440 2317 114 0 0 chr17 17370178 17370484 -72134069 + AluSq SINE Alu 1 306 -7 2103 102 28 0 chr17 17371021 17371306 -72133247 + AluSg SINE Alu 2 294 -16 287 238 8 16 chr17 17371311 17371402 -72133151 - MIR SINE MIR -62 146 63 1801 124 84 0 chr17 17372370 17372643 -72131910 + AluSg SINE Alu 1 296 -14 2171 111 0 3 chr17 17372664 17372952 -72131601 + AluSx SINE Alu 1 287 -25 543 251 75 139 chr17 17373086 17373615 -72130938 - L1MC5 LINE L1 -51 7910 7470 2184 116 0 28 chr17 17373615 17373935 -72130618 - AluSx SINE Alu -1 311 1 543 251 75 139 chr17 17373935 17374378 -72130175 - L1MC5 LINE L1 -491 7470 7000 758 248 9 76 chr17 17374437 17374754 -72129799 - L1MC5 LINE L1 -902 6906 6680 2267 104 0 3 chr17 17374754 17375051 -72129502 - AluSx SINE Alu -16 296 1 758 248 9 76 chr17 17375051 17375113 -72129440 - L1MC5 LINE L1 -1128 6680 6615 971 179 27 0 chr17 17375114 17375284 -72129269 - AluJo SINE Alu -4 308 131 2389 101 0 0 chr17 17375284 17375590 -72128963 - AluSx SINE Alu -6 306 1 971 179 27 0 chr17 17375590 17375603 -72128950 - AluJo SINE Alu -181 131 120 1928 166 7 3 chr17 17375701 17376008 -72128545 + AluJb SINE Alu 1 308 -4 2485 76 0 0 chr17 17376098 17376399 -72128154 + AluSg SINE Alu 1 301 -9 1547 88 5 0 chr17 17376608 17376812 -72127741 - AluSx SINE Alu -2 308 104 2291 100 0 3 chr17 17376812 17377111 -72127442 + AluSg SINE Alu 2 299 -11 843 114 0 0 chr17 17377111 17377225 -72127328 - AluSx SINE Alu -198 114 1 739 193 0 22 chr17 17377235 17377370 -72127183 + FLAM_A SINE Alu 1 132 -1 2294 84 3 3 chr17 17377385 17377695 -72126858 + AluSg SINE Alu 1 310 0 1187 165 121 40 chr17 17377974 17378148 -72126405 - AluJo SINE Alu -18 294 89 2510 128 43 19 chr17 17378148 17378563 -72125990 + MSTA LTR MaLR 1 425 -3 1187 165 121 40 chr17 17378563 17378660 -72125893 - AluJo SINE Alu -223 89 1 1562 177 16 10 chr17 17378672 17378982 -72125571 - AluJo SINE Alu 0 312 1 2292 73 3 19 chr17 17379009 17379322 -72125231 + AluSp SINE Alu 1 308 -5 1823 104 79 0 chr17 17379489 17379767 -72124786 + AluSp SINE Alu 1 300 -13 563 271 111 0 chr17 17379939 17380226 -72124327 - L1ME4a LINE L1 -194 5927 5603 1371 203 33 13 chr17 17380226 17380531 -72124022 - AluJo SINE Alu -1 311 1 563 271 111 0 chr17 17380531 17380549 -72124004 - L1ME4a LINE L1 -518 5603 5588 565 281 99 80 chr17 17380585 17380834 -72123719 - L1ME4a LINE L1 -1731 4415 4172 1534 125 188 4 chr17 17380834 17381090 -72123463 - AluSp SINE Alu 0 303 1 565 281 99 80 chr17 17381090 17381234 -72123319 - L1ME4a LINE L1 -1974 4172 4011 2077 121 3 0 chr17 17381234 17381532 -72123021 - AluSx SINE Alu -13 299 1 565 281 99 80 chr17 17381532 17381561 -72122992 - L1ME4a LINE L1 -2135 4011 3984 352 280 56 9 chr17 17381726 17381833 -72122720 + MIR SINE MIR 28 139 -123 4941 71 48 5 chr17 17381955 17382617 -72121936 - LTR8 LTR ERV1 0 691 1 298 214 0 0 chr17 17382783 17382839 -72121714 - Tigger5 DNA MER2_type -6 2317 2262 1875 159 0 10 chr17 17382850 17383158 -72121395 - AluJb SINE Alu -5 307 3 2040 128 7 0 chr17 17383169 17383473 -72121080 - AluSq SINE Alu -7 306 1 986 118 0 0 chr17 17383474 17383609 -72120944 - AluSq/x SINE Alu -177 135 1 366 231 0 0 chr17 17383612 17383690 -72120863 + Tigger5 DNA MER2_type 2243 2320 -3 359 48 0 0 chr17 17383705 17383747 -72120806 - AluSc SINE Alu -17 282 241 1026 94 0 7 chr17 17383747 17383885 -72120668 - AluSc SINE Alu -172 137 1 350 326 0 0 chr17 17383885 17383974 -72120579 - L1MC4 LINE L1 -1340 6702 6614 309 360 0 0 chr17 17383898 17383987 -72120566 + L1MC4 LINE L1 6614 6702 -1340 * 2075 86 0 40 chr17 17384003 17384305 -72120248 - AluY SINE Alu -21 290 1 2254 67 21 0 chr17 17384420 17384704 -72119849 + AluSc SINE Alu 1 290 -19 1364 193 55 55 chr17 17384750 17384855 -72119698 - MLT1B LTR MaLR -4 386 282 2734 6 0 13 chr17 17384855 17385171 -72119382 - AluYb8 SINE Alu -6 312 1 1364 193 55 55 chr17 17385171 17385448 -72119105 - MLT1B LTR MaLR -107 283 4 1552 185 229 0 chr17 17385451 17385792 -72118761 - MLT1B-int LTR MaLR 0 1735 1317 359 228 65 11 chr17 17385768 17385860 -72118693 - MLT1B-int LTR MaLR -953 782 686 * 3216 194 35 21 chr17 17385957 17386064 -72118489 - MLT1B-int LTR MaLR -655 716 612 2299 92 0 0 chr17 17386064 17386368 -72118185 - AluSg SINE Alu -6 304 1 3216 194 35 21 chr17 17386368 17386966 -72117587 - MLT1B-int LTR MaLR -759 612 1 1089 196 36 46 chr17 17386966 17387247 -72117306 - MLT1A2 LTR MaLR 0 374 97 811 163 16 0 chr17 17387249 17387378 -72117175 + Tigger7 DNA MER2_type 1 131 -574 1891 120 0 7 chr17 17387378 17387654 -72116899 + AluSx SINE Alu 1 274 -38 1991 189 176 22 chr17 17387654 17387667 -72116886 - MLT2B3 LTR ERVL -22 532 522 207 0 0 0 chr17 17387667 17387690 -72116863 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1991 189 176 22 chr17 17387690 17388126 -72116427 - MLT2B3 LTR ERVL -32 522 14 1854 145 0 10 chr17 17388135 17388432 -72116121 - AluSq SINE Alu -19 294 1 964 164 0 7 chr17 17388455 17388607 -72115946 + Tigger7 DNA MER2_type 2337 2487 0 406 188 115 31 chr17 17388607 17388703 -72115850 - MLT1A2 LTR MaLR -286 104 1 592 237 160 12 chr17 17388897 17389066 -72115487 - MIR SINE MIR -58 204 11 395 313 41 27 chr17 17389110 17389257 -72115296 - MIR SINE MIR -70 192 44 1897 153 10 0 chr17 17389326 17389621 -72114932 + AluJb SINE Alu 1 298 -14 199 246 87 72 chr17 17389891 17389960 -72114593 - L2 LINE L2 -10 3303 3234 2291 88 0 0 chr17 17390249 17390554 -72113999 - AluSc SINE Alu -4 305 1 44 63 0 0 chr17 17390728 17390807 -72113746 + AT_rich Low_complexity Low_complexity 1 79 0 1226 163 26 115 chr17 17391118 17391467 -72113086 + AluYb8 SINE Alu 1 318 0 636 163 23 0 chr17 17391579 17391708 -72112845 + L1MA7 LINE L1 6154 6285 -6 1522 185 17 14 chr17 17391844 17392141 -72112412 + AluJo SINE Alu 1 298 -14 213 279 67 117 chr17 17392200 17392379 -72112174 + L2 LINE L2 2893 3062 -210 2332 93 3 0 chr17 17392439 17392749 -72111804 - AluSp SINE Alu -1 312 2 183 114 0 0 chr17 17392760 17392795 -72111758 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2255 77 7 0 chr17 17392797 17393084 -72111469 - AluY SINE Alu -22 289 1 350 230 3 24 chr17 17394306 17394416 -72110137 + L1MC/D LINE L1 5664 5768 -353 1867 99 3 51 chr17 17394507 17394832 -72109721 - AluSg SINE Alu 0 311 1 1474 165 53 4 chr17 17394850 17395165 -72109388 - AluJb SINE Alu 0 333 6 533 144 41 41 chr17 17395194 17395291 -72109262 + AluJb SINE Alu 194 290 -22 2296 93 0 10 chr17 17395317 17395629 -72108924 + AluSq SINE Alu 1 309 -4 2039 101 7 0 chr17 17395967 17396244 -72108309 + AluSq SINE Alu 3 281 -32 768 52 0 0 chr17 17396244 17396341 -72108212 + (GA)n Simple_repeat Simple_repeat 2 98 0 2197 102 0 0 chr17 17396357 17396660 -72107893 - AluSg SINE Alu -7 303 1 1976 121 11 0 chr17 17396663 17396983 -72107570 - AluSp SINE Alu 0 323 1 668 106 97 0 chr17 17397492 17397605 -72106948 + L1MD3 LINE L1 4832 4955 -1191 598 143 0 36 chr17 17397606 17397718 -72106835 + FLAM_C SINE Alu 36 143 0 626 188 72 0 chr17 17397718 17397856 -72106697 + L1MD3 LINE L1 4943 5090 -1056 4164 184 81 64 chr17 17397856 17399020 -72105533 + MER52A LTR ERV1 1 1226 -529 2189 107 0 3 chr17 17399020 17399319 -72105234 + AluSg SINE Alu 1 298 -12 4164 184 81 64 chr17 17399319 17399419 -72105134 + MER52A LTR ERV1 1226 1323 -432 735 177 0 8 chr17 17399424 17399548 -72105005 + MER52A LTR ERV1 1633 1755 0 927 196 10 0 chr17 17399548 17399747 -72104806 + L1MD3 LINE L1 5087 5287 -859 366 202 9 132 chr17 17399747 17399869 -72104684 + AluJ/FLAM SINE Alu 1 93 -209 1160 147 0 21 chr17 17399885 17400076 -72104477 - AluJb SINE Alu -115 197 11 22 0 0 0 chr17 17400093 17400115 -72104438 + AT_rich Low_complexity Low_complexity 1 22 0 2031 133 0 0 chr17 17400123 17400416 -72104137 + AluSx SINE Alu 1 293 -19 1407 196 26 191 chr17 17400417 17400731 -72103822 + L1MD3 LINE L1 5306 5544 -2451 688 181 24 16 chr17 17400731 17400858 -72103695 + FLAM_A SINE Alu 12 139 -3 2429 167 41 24 chr17 17400858 17401368 -72103185 + L1MB7 LINE L1 5604 6122 -62 1515 169 53 3 chr17 17401369 17401653 -72102900 - AluJo SINE Alu -14 298 1 2106 110 7 3 chr17 17401702 17402003 -72102550 - AluSc SINE Alu -7 302 1 2186 79 0 64 chr17 17402016 17402193 -72102360 - AluSq SINE Alu -5 308 160 2042 106 25 0 chr17 17402193 17402477 -72102076 - AluSx SINE Alu -8 304 14 2186 79 0 64 chr17 17402477 17402628 -72101925 - AluSq SINE Alu -153 160 1 1723 72 83 51 chr17 17402782 17403109 -72101444 - AluSq SINE Alu 0 336 1 2139 96 3 3 chr17 17403643 17403936 -72100617 + AluSg SINE Alu 1 293 -17 1772 111 93 0 chr17 17404315 17404594 -72099959 + AluSx SINE Alu 1 305 -7 2241 65 0 10 chr17 17404781 17405074 -72099479 - AluY SINE Alu -16 295 6 2132 135 85 50 chr17 17405196 17405633 -72098920 - Tigger2 DNA MER2_type 0 2718 2267 478 72 29 14 chr17 17405615 17405684 -72098869 + MER8 DNA MER2_type 170 239 0 * 911 188 53 0 chr17 17405737 17405907 -72098646 + FRAM SINE Alu 1 176 0 327 288 40 107 chr17 17406144 17406443 -72098110 - L2 LINE L2 -68 3204 2926 212 0 36 0 chr17 17406616 17406644 -72097909 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2090 109 0 3 chr17 17406646 17406931 -72097622 - AluSq SINE Alu -28 285 2 2039 119 0 10 chr17 17406932 17407244 -72097309 - AluSc SINE Alu 0 309 1 538 224 98 7 chr17 17407250 17407393 -72097160 - MIR SINE MIR -26 236 81 2095 103 7 10 chr17 17407548 17407849 -72096704 + AluSx SINE Alu 1 300 -12 380 305 46 40 chr17 17407849 17408000 -72096553 - MER5B DNA MER1_type -26 152 1 2201 87 0 7 chr17 17408187 17408486 -72096067 + AluSq SINE Alu 1 297 -16 210 100 80 0 chr17 17408607 17408657 -72095896 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 2234 86 20 0 chr17 17408797 17409099 -72095454 + AluSx SINE Alu 1 308 -4 339 299 97 19 chr17 17409427 17409581 -72094972 + MIR3 SINE MIR 40 205 -3 585 101 54 88 chr17 17409621 17409719 -72094834 - MER53 DNA DNA 0 189 96 2246 99 0 0 chr17 17409719 17410012 -72094541 - AluSg SINE Alu -17 293 1 585 101 54 88 chr17 17410012 17410061 -72094492 - MER53 DNA DNA -93 96 47 180 0 0 0 chr17 17410061 17410081 -72094472 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 541 195 31 39 chr17 17410084 17410212 -72094341 - FLAM_C SINE Alu -16 127 1 489 271 93 74 chr17 17410630 17411051 -72093502 + L2 LINE L2 1685 2113 -1201 483 320 174 12 chr17 17411224 17411471 -72093082 - L2 LINE L2 -1 3271 2985 186 398 68 31 chr17 17411516 17411931 -72092622 - L2 LINE L2 -454 2860 2431 216 97 0 0 chr17 17412558 17412589 -72091964 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3135 120 30 52 chr17 17412590 17412623 -72091930 - MER41B LTR ERV1 -88 547 515 2252 87 0 0 chr17 17412623 17412921 -72091632 + AluSq SINE Alu 1 298 -15 3135 120 30 52 chr17 17412921 17412932 -72091621 - MER41B LTR ERV1 -120 515 505 2169 114 0 0 chr17 17412932 17413240 -72091313 + AluSx SINE Alu 1 308 -4 3135 120 30 52 chr17 17413240 17413753 -72090800 - MER41B LTR ERV1 -130 505 1 13023 93 21 18 chr17 17413753 17413924 -72090629 - MER41B-int LTR ERV1 0 5946 5777 1998 144 0 0 chr17 17413924 17414223 -72090330 + AluSx SINE Alu 1 299 -13 13023 93 21 18 chr17 17414223 17414633 -72089920 - MER41B-int LTR ERV1 -169 5777 5370 1991 121 0 14 chr17 17414633 17414942 -72089611 + AluSq SINE Alu 1 305 0 13023 93 21 18 chr17 17414942 17416238 -72088315 - MER41B-int LTR ERV1 -576 5370 2430 1493 132 0 0 chr17 17416238 17416451 -72088102 - AluSx SINE Alu -12 298 86 632 119 0 0 chr17 17416485 17416569 -72087984 - AluSx SINE Alu -227 86 3 2780 73 35 12 chr17 17416571 17416993 -72087560 - MER41B-int LTR ERV1 -2227 3719 3288 1653 119 65 18 chr17 17416979 17417256 -72087297 - MER41B-int LTR ERV1 -3025 2921 2632 * 532 165 35 0 chr17 17417255 17417340 -72087213 - MER41B-int LTR ERV1 -5858 88 1 * 1004 105 26 7 chr17 17417340 17417492 -72087061 - MER41B LTR ERV1 0 635 481 1054 148 76 52 chr17 17418665 17418875 -72085678 - L1MC1 LINE L1 -1 6332 6118 2054 111 0 0 chr17 17418877 17419185 -72085368 - AluSg1 SINE Alu 0 308 1 215 250 0 0 chr17 17420768 17420812 -72083741 + MIR3 SINE MIR 156 199 -9 1674 131 27 44 chr17 17421068 17421189 -72083364 + AluJb SINE Alu 1 123 -189 2118 118 0 0 chr17 17421189 17421485 -72083068 - AluSx SINE Alu -16 296 1 1674 131 27 44 chr17 17421485 17421661 -72082892 + AluJb SINE Alu 123 293 -19 739 203 0 0 chr17 17421721 17421854 -72082699 + FLAM_C SINE Alu 1 133 0 2287 91 0 3 chr17 17422152 17422459 -72082094 - AluSq SINE Alu -7 306 1 411 186 2 16 chr17 17422478 17422561 -72081992 - AluS SINE Alu -236 67 1 * 3923 83 2 63 chr17 17422561 17423144 -72081409 + LTR8 LTR ERV1 145 691 0 663 169 8 32 chr17 17423178 17423302 -72081251 - FLAM_C SINE Alu -21 122 2 1932 93 58 0 chr17 17423487 17423765 -72080788 + AluSg SINE Alu 1 294 -16 313 354 23 23 chr17 17425114 17425244 -72079309 + L2 LINE L2 3141 3270 -2 470 228 158 38 chr17 17426103 17426261 -72078292 - L1ME LINE L1 -452 5669 5493 195 42 0 0 chr17 17426360 17426384 -72078169 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2113 112 7 0 chr17 17426384 17426687 -72077866 - AluSq SINE Alu -8 305 1 2316 90 3 3 chr17 17426709 17427021 -72077532 - AluSp SINE Alu -1 312 1 2349 100 3 0 chr17 17427958 17428258 -72076295 - AluSp SINE Alu -12 301 1 1829 97 43 8 chr17 17428262 17428519 -72076034 - AluSx SINE Alu 0 312 47 206 136 23 0 chr17 17428536 17428580 -72075973 + C-rich Low_complexity Low_complexity 1 45 0 1535 182 52 21 chr17 17428580 17428866 -72075687 - AluJb SINE Alu -17 295 1 186 43 0 0 chr17 17428875 17428898 -72075655 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1687 149 11 8 chr17 17428900 17429162 -72075391 - AluJb SINE Alu -49 263 1 2319 122 3 0 chr17 17429408 17429719 -72074834 + AluSx SINE Alu 1 312 0 2352 99 3 0 chr17 17429766 17430069 -72074484 + AluSx SINE Alu 1 304 -8 519 186 0 0 chr17 17430072 17430169 -72074384 + FLAM_A SINE Alu 44 140 -2 2019 116 4 0 chr17 17430215 17430483 -72074070 - AluSx SINE Alu -10 302 34 213 336 57 16 chr17 17430547 17430669 -72073884 + L2 LINE L2 1662 1788 -1526 452 243 62 11 chr17 17430694 17430871 -72073682 + L1ME LINE L1 5615 5800 -321 2399 66 0 13 chr17 17431425 17431726 -72072827 + AluY SINE Alu 1 297 -14 230 274 201 62 chr17 17432316 17432495 -72072058 - MIR3 SINE MIR -2 206 3 391 268 51 29 chr17 17432837 17432975 -72071578 + LTR33A LTR ERVL 40 180 -343 611 231 54 45 chr17 17433031 17433252 -72071301 + LTR33A LTR ERVL 298 520 -3 2243 87 4 0 chr17 17433324 17433601 -72070952 + AluSx SINE Alu 21 298 -14 1098 156 6 0 chr17 17433679 17433839 -72070714 + AluJb SINE Alu 133 293 -19 2203 119 10 0 chr17 17433844 17434147 -72070406 + AluSq SINE Alu 1 306 -7 396 213 49 55 chr17 17434192 17434356 -72070197 - Charlie7 DNA MER1_type -1 2611 2449 288 284 25 0 chr17 17434363 17434444 -72070109 - Charlie7 DNA MER1_type -2521 91 9 2452 101 0 0 chr17 17434512 17434819 -72069734 + AluSg SINE Alu 1 307 -3 2319 50 4 14 chr17 17434922 17435201 -72069352 - AluY SINE Alu -35 276 1 1898 132 138 0 chr17 17436021 17436317 -72068236 + MER1B DNA MER1_type 1 337 0 197 308 39 0 chr17 17436383 17436435 -72068118 + L2 LINE L2 2717 2770 -544 2217 125 3 10 chr17 17436928 17437241 -72067312 + AluSx SINE Alu 1 311 -1 1050 118 0 0 chr17 17437241 17437377 -72067176 + AluSg/x SINE Alu 132 267 -43 2032 97 40 4 chr17 17437378 17437656 -72066897 + AluSx SINE Alu 25 312 0 2228 128 3 0 chr17 17438581 17438885 -72065668 + AluSx SINE Alu 1 305 -7 276 222 74 12 chr17 17438889 17438970 -72065583 - MIR SINE MIR -120 142 57 351 106 0 30 chr17 17439319 17439385 -72065168 - FAM SINE Alu 0 179 116 1068 171 21 36 chr17 17439385 17439442 -72065111 - AluJo SINE Alu -122 190 134 2405 96 3 0 chr17 17439442 17439744 -72064809 - AluSg SINE Alu -7 303 1 2475 79 7 0 chr17 17439746 17440051 -72064502 - AluY SINE Alu -4 307 1 1068 171 21 36 chr17 17440051 17440183 -72064370 - AluJo SINE Alu -179 133 1 2263 113 3 0 chr17 17440775 17441077 -72063476 - AluSc SINE Alu -4 305 3 1276 118 0 0 chr17 17441717 17441886 -72062667 - AluSg/x SINE Alu -8 304 136 2644 62 0 0 chr17 17441888 17442196 -72062357 - AluY SINE Alu -3 308 1 838 141 0 44 chr17 17442662 17442797 -72061756 + FLAM_C SINE Alu 5 133 0 396 266 28 46 chr17 17442918 17443027 -72061526 - L2 LINE L2 -5 3308 3202 927 168 39 39 chr17 17443041 17443187 -72061366 - MER20 DNA MER1_type -16 203 55 1592 150 49 65 chr17 17443187 17443494 -72061059 + AluJo SINE Alu 1 302 -10 927 168 39 39 chr17 17443494 17443550 -72061003 - MER20 DNA MER1_type -163 56 1 949 162 0 42 chr17 17443966 17444133 -72060420 - AluJo/FRAM SINE Alu -19 293 134 2180 107 3 7 chr17 17444133 17444431 -72060122 - AluSg SINE Alu -13 297 1 200 269 17 131 chr17 17444453 17444628 -72059925 - MIR SINE MIR -62 146 43 2406 85 3 3 chr17 17444705 17445011 -72059542 - AluSp SINE Alu -7 306 1 231 146 21 62 chr17 17445785 17445833 -72058720 + MIR SINE MIR 217 262 0 1587 172 47 37 chr17 17445867 17446163 -72058390 + AluJo SINE Alu 1 299 -13 186 43 0 0 chr17 17446192 17446215 -72058338 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2312 102 0 0 chr17 17446235 17446528 -72058025 + AluSg1 SINE Alu 1 293 -16 446 220 28 46 chr17 17446630 17446739 -72057814 - L2 LINE L2 -5 3308 3202 890 184 0 7 chr17 17446791 17446932 -72057621 + AluJo SINE Alu 19 158 -154 1626 168 47 37 chr17 17446975 17447273 -72057280 - AluJo SINE Alu -11 301 1 714 173 0 0 chr17 17447355 17447465 -72057088 + AluJo SINE Alu 164 273 -39 2140 129 3 10 chr17 17447663 17447974 -72056579 + AluSg SINE Alu 1 309 -1 2281 125 3 0 chr17 17447979 17448290 -72056263 + AluSx SINE Alu 1 312 0 342 0 0 0 chr17 17448469 17448507 -72056046 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 371 48 57 chr17 17448627 17448724 -72055829 - MIR SINE MIR -69 139 42 2056 89 8 0 chr17 17448724 17448981 -72055572 - AluSq SINE Alu -18 295 37 188 371 48 57 chr17 17448981 17449007 -72055546 - MIR SINE MIR -166 42 17 288 329 63 14 chr17 17449028 17449171 -72055382 + MIR SINE MIR 5 154 -108 210 276 0 48 chr17 17449381 17449486 -72055067 + T-rich Low_complexity Low_complexity 2 101 0 315 221 92 53 chr17 17449497 17449628 -72054925 - MIR SINE MIR -64 198 63 11198 36 3 84 chr17 17449641 17451140 -72053413 - SVA Other Other 0 1386 9 2197 76 65 3 chr17 17453867 17454178 -72050375 - AluSg SINE Alu 0 329 1 420 264 52 21 chr17 17455472 17455644 -72048909 - MIR SINE MIR -59 203 32 22 35 0 0 chr17 17456276 17456305 -72048248 + AT_rich Low_complexity Low_complexity 1 29 0 615 243 91 61 chr17 17456307 17456448 -72048105 - L1ME4a LINE L1 -3 6118 5983 2317 102 3 3 chr17 17456448 17456753 -72047800 - AluSq SINE Alu -8 305 1 615 243 91 61 chr17 17456753 17456833 -72047720 - L1ME4a LINE L1 -138 5983 5907 2249 117 3 0 chr17 17456833 17457132 -72047421 + AluSg SINE Alu 1 300 -10 615 243 91 61 chr17 17457132 17457154 -72047399 - L1ME4a LINE L1 -214 5907 5887 1686 150 107 0 chr17 17457154 17457434 -72047119 + AluJo SINE Alu 1 310 -2 615 243 91 61 chr17 17457434 17457583 -72046970 - L1ME4a LINE L1 -234 5887 5712 2270 94 3 3 chr17 17457655 17457954 -72046599 + AluSx SINE Alu 1 299 -13 517 206 0 0 chr17 17458187 17458289 -72046264 + FLAM_A SINE Alu 1 102 -40 850 150 8 21 chr17 17458325 17458566 -72045987 + GA-rich Low_complexity Low_complexity 1 237 0 634 189 6 23 chr17 17458580 17458755 -72045798 + GA-rich Low_complexity Low_complexity 1 172 0 2249 123 0 19 chr17 17458800 17459117 -72045436 - AluSx SINE Alu -1 311 1 2374 113 0 0 chr17 17459118 17459420 -72045133 - AluSx SINE Alu -10 302 1 2221 116 3 0 chr17 17459420 17459722 -72044831 - AluSp SINE Alu -10 303 1 206 274 145 0 chr17 17459742 17459804 -72044749 - L2 LINE L2 -11 3261 3191 234 91 0 0 chr17 17459889 17459922 -72044631 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 2390 78 6 34 chr17 17459943 17460265 -72044288 - AluSp SINE Alu 0 313 1 2245 119 0 3 chr17 17460267 17460577 -72043976 - AluSx SINE Alu -3 309 1 317 311 0 0 chr17 17460649 17460781 -72043772 - L1M4 LINE L1 -3129 3017 2886 2554 195 106 12 chr17 17460807 17461375 -72043178 - MER82 DNA MER2_type -2 651 31 2225 111 3 3 chr17 17461418 17461716 -72042837 - AluSq SINE Alu -15 298 1 21 36 0 0 chr17 17461728 17461756 -72042797 + AT_rich Low_complexity Low_complexity 1 28 0 2170 114 0 19 chr17 17461792 17462099 -72042454 - AluSg SINE Alu -9 301 1 2056 123 0 27 chr17 17462133 17462447 -72042106 - AluSq SINE Alu 0 306 1 2067 84 15 96 chr17 17462506 17462840 -72041713 - AluSx SINE Alu -4 308 2 2404 71 40 0 chr17 17463246 17463542 -72041011 + AluY SINE Alu 1 308 -3 368 282 124 64 chr17 17463545 17463747 -72040806 + MIR SINE MIR 28 241 -21 231 219 0 135 chr17 17464295 17464391 -72040162 + MIR SINE MIR 144 226 -36 573 222 169 11 chr17 17464889 17465078 -72039475 + MIR SINE MIR 13 231 -31 421 299 171 19 chr17 17465390 17465543 -72039010 + L1ME LINE L1 5501 5696 -425 2045 133 17 0 chr17 17465543 17465837 -72038716 + AluSx SINE Alu 1 299 -13 421 299 171 19 chr17 17465837 17465894 -72038659 + L1ME LINE L1 5696 5743 -378 222 222 0 0 chr17 17465986 17466040 -72038513 + (TA)n Simple_repeat Simple_repeat 2 55 0 2255 88 3 0 chr17 17466186 17466471 -72038082 + AluSc SINE Alu 3 288 -21 1980 169 7 0 chr17 17466480 17466782 -72037771 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr17 17466782 17466816 -72037737 + (TA)n Simple_repeat Simple_repeat 2 35 0 1172 119 18 0 chr17 17466950 17467118 -72037435 + AluSg/x SINE Alu 142 312 0 324 337 78 48 chr17 17467362 17467528 -72037025 - MER91A DNA MER1_type -23 173 3 500 317 160 13 chr17 17468098 17468398 -72036155 + HAL1 LINE L1 1113 1456 -1051 2366 107 0 0 chr17 17468409 17468708 -72035845 + AluSx SINE Alu 1 299 -13 2496 68 7 0 chr17 17468711 17469006 -72035547 + AluSc SINE Alu 1 297 -12 324 328 89 39 chr17 17469132 17469391 -72035162 + L1 LINE L1 2859 3130 -3016 * 463 289 117 63 chr17 17469361 17469711 -72034842 + L1M4 LINE L1 2248 2616 -3530 1021 160 35 25 chr17 17469775 17469940 -72034613 - AluJo SINE Alu 0 302 140 2133 107 17 14 chr17 17469940 17470248 -72034305 - AluSx SINE Alu 0 312 1 1021 160 35 25 chr17 17470248 17470261 -72034292 - AluJo SINE Alu -162 140 129 198 0 0 0 chr17 17470261 17470283 -72034270 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1021 160 35 25 chr17 17470283 17470323 -72034230 - AluJo SINE Alu -173 129 81 765 274 188 50 chr17 17470369 17470905 -72033648 + L1M4 LINE L1 2745 3354 -2792 780 135 326 6 chr17 17470912 17471090 -72033463 + AluSg/x SINE Alu 65 299 -10 2557 177 51 26 chr17 17471090 17471404 -72033149 + L1MB5 LINE L1 5496 5830 -344 2339 108 0 7 chr17 17471404 17471710 -72032843 + AluSg SINE Alu 1 304 -6 2557 177 51 26 chr17 17471710 17471927 -72032626 + L1MB5 LINE L1 5830 6040 -134 24 32 0 0 chr17 17471927 17471958 -72032595 + AT_rich Low_complexity Low_complexity 1 31 0 1160 186 21 0 chr17 17471958 17472146 -72032407 - AluJo SINE Alu -26 286 95 335 149 60 0 chr17 17472175 17472242 -72032311 + L1MB7 LINE L1 6095 6165 -19 2553 47 7 0 chr17 17472326 17472623 -72031930 + AluY SINE Alu 2 300 -11 335 271 111 49 chr17 17472758 17472902 -72031651 + L1M4 LINE L1 4458 4610 -1536 22 70 0 0 chr17 17472906 17472949 -72031604 + AT_rich Low_complexity Low_complexity 1 43 0 378 320 29 23 chr17 17472964 17473136 -72031417 + L1M4 LINE L1 4570 4742 -1404 2370 86 3 0 chr17 17473136 17473428 -72031125 + AluSg SINE Alu 1 293 -17 266 330 12 53 chr17 17473565 17473749 -72030804 + L1MC4a LINE L1 4504 4669 -1477 2118 93 7 4 chr17 17473749 17474028 -72030525 + AluSx SINE Alu 1 280 -32 266 330 12 53 chr17 17474028 17474182 -72030371 + L1MC4a LINE L1 4669 4828 -1318 2192 104 0 4 chr17 17474358 17474671 -72029882 + AluSg SINE Alu 1 312 0 1602 163 3 74 chr17 17474734 17474899 -72029654 - AluJo SINE Alu -10 302 127 2276 95 3 38 chr17 17474899 17475216 -72029337 - AluSp SINE Alu -1 312 7 1602 163 3 74 chr17 17475216 17475227 -72029326 - AluJo SINE Alu -185 127 117 2442 73 0 3 chr17 17475227 17475527 -72029026 - AluY SINE Alu -12 299 1 1602 163 3 74 chr17 17475527 17475674 -72028879 - AluJo SINE Alu -195 117 1 2473 91 0 0 chr17 17475708 17476017 -72028536 + AluSg SINE Alu 1 309 -1 491 256 118 31 chr17 17476115 17476144 -72028409 + L1MC4a LINE L1 5573 5598 -2210 2281 99 10 16 chr17 17476144 17476457 -72028096 + AluSq SINE Alu 1 311 -2 491 256 118 31 chr17 17476457 17476716 -72027837 + L1MC4a LINE L1 5598 5886 -1922 1136 175 101 9 chr17 17476716 17476933 -72027620 + AluJo SINE Alu 3 239 -73 1371 149 193 28 chr17 17476952 17477112 -72027441 - AluSg SINE Alu -10 290 158 299 65 22 0 chr17 17477112 17477158 -72027395 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2061 126 7 7 chr17 17477158 17477443 -72027110 - AluSx SINE Alu -27 285 1 1371 149 193 28 chr17 17477443 17477530 -72027023 - AluSg SINE Alu -141 159 1 32 0 0 0 chr17 17477534 17477566 -72026987 + AT_rich Low_complexity Low_complexity 1 32 0 754 178 7 22 chr17 17477709 17477844 -72026709 - AluJo SINE Alu -178 134 2 2356 113 0 0 chr17 17477857 17478167 -72026386 - AluSx SINE Alu -1 311 2 26 0 0 0 chr17 17478167 17478193 -72026360 + AT_rich Low_complexity Low_complexity 1 26 0 914 171 49 6 chr17 17478610 17478774 -72025779 - FRAM SINE Alu -6 170 1 228 35 0 0 chr17 17478845 17478874 -72025679 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2242 83 11 0 chr17 17478874 17479152 -72025401 - AluSq SINE Alu -32 281 1 827 131 8 0 chr17 17479183 17479313 -72025240 + L1MB3 LINE L1 6008 6138 -45 1465 181 54 7 chr17 17479313 17479589 -72024964 + AluJo SINE Alu 1 289 -23 2464 95 0 0 chr17 17479799 17480104 -72024449 - AluSx SINE Alu -7 305 1 2277 114 0 3 chr17 17480104 17480402 -72024151 - AluSx SINE Alu -15 297 1 877 171 95 0 chr17 17480461 17480619 -72023934 - AluJb SINE Alu -2 310 138 21 0 0 0 chr17 17480726 17480747 -72023806 + AT_rich Low_complexity Low_complexity 1 21 0 1886 105 8 4 chr17 17481515 17481772 -72022781 - AluSp SINE Alu -13 300 43 805 138 9 0 chr17 17482213 17482329 -72022224 - FLAM_C SINE Alu -26 117 1 2138 103 0 7 chr17 17482935 17483253 -72021300 - AluSg SINE Alu 0 316 1 1431 54 0 43 chr17 17483296 17483471 -72021082 + AluY SINE Alu 134 302 -9 1599 155 8 8 chr17 17483471 17483716 -72020837 + AluJb SINE Alu 1 245 -67 1003 279 125 24 chr17 17484151 17484651 -72019902 + L1MC4a LINE L1 5322 5883 -1925 2323 93 7 0 chr17 17484651 17484940 -72019613 + AluSx SINE Alu 1 291 -21 1003 279 125 24 chr17 17484940 17484983 -72019570 + L1MC4a LINE L1 5883 5920 -1888 1831 175 3 3 chr17 17485024 17485333 -72019220 - AluJb SINE Alu 0 309 1 254 89 133 0 chr17 17485713 17485758 -72018795 - MER66B LTR ERV1 -141 345 295 312 248 53 44 chr17 17485768 17485881 -72018672 + L1ME4a LINE L1 5634 5747 -374 345 180 30 30 chr17 17486171 17486271 -72018282 + L1ME4a LINE L1 5963 6062 -59 2314 121 3 0 chr17 17486332 17486639 -72017914 - AluSx SINE Alu -4 308 1 332 275 117 0 chr17 17487937 17488057 -72016496 - L1MC5 LINE L1 -62 7899 7766 2100 122 7 0 chr17 17488527 17488822 -72015731 - AluSg SINE Alu -13 297 1 2354 82 7 0 chr17 17489120 17489413 -72015140 - AluSp SINE Alu -18 295 1 22 0 0 0 chr17 17491181 17491203 -72013350 + GC_rich Low_complexity Low_complexity 1 22 0 200 135 0 58 chr17 17491337 17491389 -72013164 + (CGG)n Simple_repeat Simple_repeat 1 49 0 23 54 0 0 chr17 17491530 17491567 -72012986 + GC_rich Low_complexity Low_complexity 1 37 0 38 22 0 0 chr17 17491650 17491695 -72012858 + GC_rich Low_complexity Low_complexity 1 45 0 202 173 0 39 chr17 17491713 17491765 -72012788 + (CCGCG)n Simple_repeat Simple_repeat 3 52 0 2306 99 3 6 chr17 17492272 17492586 -72011967 - AluSq SINE Alu 0 313 1 857 40 64 8 chr17 17492594 17492719 -72011834 - AluSc SINE Alu -1 308 177 1387 147 72 44 chr17 17492797 17492949 -72011604 - AluJo SINE Alu -7 305 159 183 42 0 0 chr17 17492949 17492973 -72011580 + (C)n Simple_repeat Simple_repeat 1 24 0 1387 147 72 44 chr17 17492973 17493113 -72011440 - AluJo SINE Alu -153 159 5 463 223 280 0 chr17 17493147 17493322 -72011231 - L1ME3 LINE L1 -14 6148 5925 853 168 17 89 chr17 17493339 17493518 -72011035 + FRAM SINE Alu 1 166 0 338 209 22 137 chr17 17493534 17493600 -72010953 + L1ME3 LINE L1 5975 6018 -144 2001 121 46 4 chr17 17493600 17493881 -72010672 + AluSg SINE Alu 1 293 -17 338 209 22 137 chr17 17493881 17493953 -72010600 + L1ME3 LINE L1 6018 6097 -65 2374 100 10 0 chr17 17493999 17494309 -72010244 + AluSp SINE Alu 1 313 0 2070 79 79 0 chr17 17494437 17494714 -72009839 + AluSq SINE Alu 1 299 -14 2193 120 0 10 chr17 17494716 17495024 -72009529 + AluSx SINE Alu 1 305 -7 820 229 29 12 chr17 17495253 17495493 -72009060 + L1M4 LINE L1 4615 4858 -1288 2290 92 3 0 chr17 17495493 17495805 -72008748 - AluSp SINE Alu 0 314 2 1974 133 9 43 chr17 17495815 17496138 -72008415 - AluSx SINE Alu 0 312 1 2440 89 7 0 chr17 17496192 17496496 -72008057 - AluSq SINE Alu -7 306 1 209 206 191 15 chr17 17496896 17496964 -72007589 + L2 LINE L2 3229 3308 -5 1955 140 0 14 chr17 17497047 17497365 -72007188 - AluSx SINE Alu 0 314 1 2267 109 7 0 chr17 17497406 17497700 -72006853 - AluSq SINE Alu -17 296 1 1300 181 47 43 chr17 17497817 17498093 -72006460 - AluJo SINE Alu -22 290 14 1756 147 73 0 chr17 17498093 17498365 -72006188 - AluSx SINE Alu -14 298 7 2206 119 0 0 chr17 17498379 17498699 -72005854 - AluSg SINE Alu 0 320 1 913 136 0 0 chr17 17499078 17499203 -72005350 - FRAM SINE Alu -14 162 38 1209 126 0 0 chr17 17499361 17499528 -72005025 + AluSq SINE Alu 132 298 -15 1090 121 73 47 chr17 17499541 17499614 -72004939 + L1MB4 LINE L1 5943 6013 -167 2261 99 3 0 chr17 17499614 17499922 -72004631 - AluSp SINE Alu 0 309 1 1090 121 73 47 chr17 17499922 17500079 -72004474 + L1MB4 LINE L1 6013 6180 0 1021 154 41 18 chr17 17500218 17500295 -72004258 + L1MB3 LINE L1 5930 6004 -179 2069 136 0 7 chr17 17500295 17500604 -72003949 - AluSx SINE Alu -5 307 1 1021 154 41 18 chr17 17500604 17500746 -72003807 + L1MB3 LINE L1 6004 6154 -29 2163 132 0 10 chr17 17500757 17501068 -72003485 - AluSx SINE Alu 0 312 5 1714 174 28 0 chr17 17501115 17501397 -72003156 - AluJb SINE Alu -22 290 1 2272 96 7 0 chr17 17501400 17501692 -72002861 - AluSp SINE Alu -19 294 1 202 256 209 0 chr17 17502441 17502527 -72002026 - MER91A DNA MER1_type 0 196 93 2865 124 28 6 chr17 17502541 17503007 -72001546 - MER31A LTR ERV1 -9 476 1 617 237 83 18 chr17 17503070 17503239 -72001314 - MIR SINE MIR -19 243 64 1151 123 0 0 chr17 17503591 17503745 -72000808 - AluSg/x SINE Alu -24 286 133 298 0 0 45 chr17 17503747 17503791 -72000762 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1978 120 0 31 chr17 17503791 17504082 -72000471 - AluSx SINE Alu -30 282 1 379 270 128 11 chr17 17504082 17504347 -72000206 - L1ME3 LINE L1 -222 5948 5646 1791 171 0 31 chr17 17504368 17504690 -71999863 + AluJb SINE Alu 1 312 0 2099 104 61 0 chr17 17504970 17505249 -71999304 + AluSg SINE Alu 1 296 -14 1507 203 11 7 chr17 17505281 17505562 -71998991 - AluJo SINE Alu -30 282 1 512 241 129 0 chr17 17505654 17505824 -71998729 - L1ME3 LINE L1 -504 5660 5469 675 222 24 8 chr17 17505829 17505955 -71998598 - FLAM_C SINE Alu -4 129 2 2103 120 10 0 chr17 17506023 17506322 -71998231 - AluSx SINE Alu -10 302 1 386 165 0 25 chr17 17506325 17506404 -71998149 - L1ME3 LINE L1 -1448 4698 4622 1541 213 10 19 chr17 17506415 17506725 -71997828 + AluJo SINE Alu 1 307 -5 2191 117 7 0 chr17 17506728 17507027 -71997526 + AluSp SINE Alu 1 301 -12 870 97 0 0 chr17 17507037 17507150 -71997403 + AluSx SINE Alu 1 113 -200 1608 70 35 9 chr17 17507150 17507380 -71997173 + MLT2A1 LTR ERVL 1 236 -208 1369 138 10 0 chr17 17507380 17507583 -71996970 - AluSg/x SINE Alu -14 296 92 1274 111 16 3 chr17 17507700 17507895 -71996658 + MLT2A1 LTR ERVL 216 475 -40 322 96 0 19 chr17 17507931 17507983 -71996570 + MLT2A2 LTR ERVL 403 453 0 1392 103 16 0 chr17 17507983 17508167 -71996386 + AluSx SINE Alu 107 293 -17 30 27 0 0 chr17 17508190 17508227 -71996326 + AT_rich Low_complexity Low_complexity 1 37 0 1196 238 28 35 chr17 17508334 17508506 -71996047 - L1ME1 LINE L1 -5 6161 5990 313 294 43 47 chr17 17508506 17508738 -71995815 - L1MA5 LINE L1 -296 6004 5773 2447 95 0 0 chr17 17508738 17509044 -71995509 - AluSc SINE Alu 0 309 4 192 40 0 0 chr17 17509046 17509071 -71995482 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2142 134 0 0 chr17 17509071 17509354 -71995199 - AluSx SINE Alu -29 283 1 313 294 43 47 chr17 17509354 17509372 -71995181 - L1MA5 LINE L1 -526 5774 5751 29 28 0 0 chr17 17509570 17509606 -71994947 + AT_rich Low_complexity Low_complexity 1 36 0 2446 96 0 3 chr17 17509653 17509966 -71994587 + AluSx SINE Alu 1 312 0 197 349 93 8 chr17 17510073 17510202 -71994351 + L2 LINE L2 2594 2733 -581 720 280 85 78 chr17 17510260 17510285 -71994268 - L2 LINE L2 -1 3312 3289 1790 159 32 38 chr17 17510285 17510599 -71993954 + AluJb SINE Alu 1 312 0 720 280 85 78 chr17 17510599 17510777 -71993776 - L2 LINE L2 -24 3289 3114 2363 65 0 26 chr17 17510777 17511083 -71993470 - AluY SINE Alu -13 298 1 1533 164 13 80 chr17 17511085 17511397 -71993156 - AluSg SINE Alu -19 291 1 720 280 85 78 chr17 17511397 17511649 -71992904 - L2 LINE L2 -199 3114 2850 316 222 192 0 chr17 17511942 17512041 -71992512 - MIR SINE MIR -4 258 141 2129 117 0 7 chr17 17512054 17512362 -71992191 + AluSx SINE Alu 12 317 0 250 217 50 0 chr17 17512368 17512428 -71992125 - MIR SINE MIR -59 203 141 191 281 169 11 chr17 17512467 17512556 -71991997 + L2 LINE L2 3170 3272 0 364 304 0 20 chr17 17512761 17512863 -71991690 + L1MC4 LINE L1 6604 6703 -1339 1955 126 4 4 chr17 17512924 17513195 -71991358 - AluSx SINE Alu -38 274 4 1524 155 4 9 chr17 17513224 17513456 -71991097 - AluJb SINE Alu -81 231 1 183 302 0 0 chr17 17513659 17513702 -71990851 - MIR3 SINE MIR -47 161 119 1386 133 15 41 chr17 17513703 17513721 -71990832 + L1MB2 LINE L1 5812 5829 -342 2125 117 3 38 chr17 17513721 17514037 -71990516 + AluSg SINE Alu 1 305 -5 1386 133 15 41 chr17 17514037 17514100 -71990453 + L1MB2 LINE L1 5829 5892 -279 1882 163 3 13 chr17 17514100 17514407 -71990146 + AluJb SINE Alu 3 306 -6 1386 133 15 41 chr17 17514407 17514595 -71989958 + L1MB2 LINE L1 5892 6075 -96 2373 56 0 11 chr17 17514596 17514911 -71989642 + AluY SINE Alu 1 312 0 2202 94 9 41 chr17 17514912 17515231 -71989322 - AluSq SINE Alu -4 309 1 825 194 50 22 chr17 17515326 17515506 -71989047 + AluJo SINE Alu 127 311 -1 2134 133 0 0 chr17 17515530 17515824 -71988729 - AluSx SINE Alu -10 302 9 241 216 118 0 chr17 17516315 17516366 -71988187 - L2 LINE L2 -1 3271 3215 1464 164 52 14 chr17 17517512 17517645 -71986908 + AluJo SINE Alu 2 128 -184 2238 111 3 3 chr17 17517645 17517951 -71986602 + AluSx SINE Alu 1 306 -6 1464 164 52 14 chr17 17517951 17518103 -71986450 + AluJo SINE Alu 128 298 -14 2272 93 3 7 chr17 17518128 17518429 -71986124 - AluSg1 SINE Alu -9 300 1 835 50 0 10 chr17 17518536 17518636 -71985917 + AluSq/x SINE Alu 35 133 -180 1881 94 4 0 chr17 17520883 17521128 -71983425 + AluSc SINE Alu 39 284 -25 434 198 81 0 chr17 17521143 17521229 -71983324 - FRAM SINE Alu -25 151 59 1903 116 54 0 chr17 17521631 17521907 -71982646 - AluSx SINE Alu -21 291 1 824 187 166 6 chr17 17522468 17522859 -71981694 + MER21B LTR ERV1 20 492 -371 576 164 90 8 chr17 17522860 17522982 -71981571 + AluJb SINE Alu 2 133 -179 1208 179 56 96 chr17 17522991 17523293 -71981260 + AluSx SINE Alu 5 294 -8 22 0 0 0 chr17 17523406 17523428 -71981125 + AT_rich Low_complexity Low_complexity 1 22 0 847 166 90 0 chr17 17523428 17523573 -71980980 - FRAM SINE Alu -23 153 1 2319 84 7 3 chr17 17523593 17523902 -71980651 - AluSx SINE Alu -2 310 1 2308 91 0 3 chr17 17523902 17524199 -71980354 - AluY SINE Alu -14 297 2 802 158 8 8 chr17 17524239 17524372 -71980181 + AluJo SINE Alu 3 135 -177 435 59 0 0 chr17 17524372 17524423 -71980130 + AluSp/q SINE Alu 200 250 -63 1243 148 0 48 chr17 17524423 17524653 -71979900 + AluJo SINE Alu 85 303 -9 313 145 0 66 chr17 17524935 17525011 -71979542 + AluJ/FRAM SINE Alu 231 301 -1 2195 28 0 0 chr17 17525030 17525279 -71979274 + AluY SINE Alu 1 249 -62 210 37 0 0 chr17 17525379 17525406 -71979147 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2491 84 0 7 chr17 17525417 17525727 -71978826 + AluSq SINE Alu 1 308 -5 291 183 0 0 chr17 17525940 17526000 -71978553 - L1ME4a LINE L1 -2 6119 6060 381 284 124 20 chr17 17526284 17526333 -71978220 - L1MB8 LINE L1 -237 5941 5893 823 239 57 17 chr17 17526333 17526630 -71977923 - L1MC4a LINE L1 -1946 5862 5554 285 44 44 0 chr17 17526625 17526670 -71977883 + L1M3 LINE L1 5783 5829 -351 * 2301 74 14 14 chr17 17526713 17527009 -71977544 + AluSc SINE Alu 3 298 -11 2265 113 0 7 chr17 17527011 17527311 -71977242 + AluSx SINE Alu 2 299 -13 1135 82 6 31 chr17 17527311 17527470 -71977083 + AluSq SINE Alu 83 237 -76 929 196 12 6 chr17 17728820 17730345 -71774208 + ALR/Alpha Satellite centromeric 1 1534 -26 1131 156 6 0 chr17 17730447 17737099 -71767454 - ALR/Alpha Satellite centromeric 0 6692 1 1131 160 8 1 chr17 17737199 17752985 -71751568 - ALR/Alpha Satellite centromeric 0 15893 1 948 173 4 2 chr17 17753087 17755822 -71748731 - ALR/Alpha Satellite centromeric 0 2742 1 6824 64 11 41 chr17 17755842 17757552 -71747001 - SVA Other Other -683 1386 1 982 166 8 2 chr17 17757554 17759281 -71745272 - ALR/Alpha Satellite centromeric 0 1738 1 1019 168 5 2 chr17 17759383 17767399 -71737154 - ALR/Alpha Satellite centromeric 0 8045 1 917 173 2 3 chr17 17767410 17768243 -71736310 - ALR/Alpha Satellite centromeric -2 832 1 14864 46 7 1 chr17 17768243 17770873 -71733680 + L1PA4 LINE L1 3511 6146 -9 230 243 35 14 chr17 17770873 17771017 -71733536 + (TTATA)n Simple_repeat Simple_repeat 4 150 0 1077 161 3 1 chr17 17771860 17775178 -71729375 - ALR/Alpha Satellite centromeric 0 3324 1 826 196 2 16 chr17 17775282 17776305 -71728248 - ALR/Alpha Satellite centromeric -1 1008 1 10730 34 0 0 chr17 17776305 17777673 -71726880 - L1P LINE L1 -1875 4271 2904 364 220 164 13 chr17 17778387 17778546 -71726007 + L1MC4 LINE L1 7444 7626 -416 1101 159 9 4 chr17 17778546 17778935 -71725618 - ALR/Alpha Satellite centromeric -6 390 1 936 283 158 18 chr17 17779059 17779667 -71724886 - L2 LINE L2 -2027 1287 595 2038 184 32 117 chr17 17779730 17780328 -71724225 - MER7C DNA MER2_type -55 547 1 332 268 143 62 chr17 17780338 17780610 -71723943 - L2 LINE L2 -2802 512 219 547 117 0 0 chr17 17781031 17781108 -71723445 - AluSc SINE Alu -12 297 221 353 293 16 16 chr17 17781592 17781715 -71722838 - L2 LINE L2 -55 3258 3136 701 216 8 0 chr17 17781718 17781843 -71722710 + FLAM_C SINE Alu 5 130 -13 289 249 147 102 chr17 17782027 17782204 -71722349 + MER5A DNA MER1_type 3 187 -2 386 258 23 23 chr17 17782280 17782412 -71722141 + L2 LINE L2 2927 3058 -214 311 305 12 10 chr17 17782748 17782868 -71721685 + MIR SINE MIR 33 152 -65 25 31 0 0 chr17 17783963 17783995 -71720558 + AT_rich Low_complexity Low_complexity 1 32 0 310 229 184 87 chr17 17784328 17784546 -71720007 - MLT1L LTR MaLR -225 390 152 404 323 39 8 chr17 17784733 17784863 -71719690 - L2 LINE L2 -2 3270 3137 397 306 6 12 chr17 17785000 17785160 -71719393 - L1ME LINE L1 -324 5797 5639 493 303 0 0 chr17 17785168 17785290 -71719263 + FLAM_A SINE Alu 2 123 -10 279 244 0 0 chr17 17785342 17785457 -71719096 + (CAT)n Simple_repeat Simple_repeat 1 115 0 687 106 5 80 chr17 17785479 17785667 -71718886 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 570 229 0 0 chr17 17785677 17785856 -71718697 + (CAT)n Simple_repeat Simple_repeat 1 179 0 229 296 145 69 chr17 17786528 17786832 -71717721 + L2 LINE L2 2578 2904 -410 311 281 31 0 chr17 17788172 17788268 -71716285 - MIR SINE MIR -66 142 44 345 186 0 0 chr17 17788281 17788340 -71716213 + MIR SINE MIR 61 119 -89 375 241 146 63 chr17 17788460 17788618 -71715935 - MIR SINE MIR -63 145 12 444 219 0 0 chr17 17789042 17789165 -71715388 + (TGGA)n Simple_repeat Simple_repeat 3 125 0 574 245 94 43 chr17 17790036 17790269 -71714284 - MIR SINE MIR -1 261 17 567 226 39 32 chr17 17790272 17790427 -71714126 + MIR SINE MIR 8 163 -99 2100 101 3 14 chr17 17791056 17791383 -71713170 - AluY SINE Alu 0 311 1 231 201 394 50 chr17 17795219 17795498 -71709055 + L2 LINE L2 2361 2735 -579 1931 198 24 46 chr17 17795787 17796283 -71708270 - L1MA8 LINE L1 -25 6968 6484 317 234 80 7 chr17 17796450 17796587 -71707966 - L1MA8 LINE L1 -816 6032 5886 878 226 141 7 chr17 17796593 17796890 -71707663 - L1MA8 LINE L1 -1082 5766 5430 416 262 48 8 chr17 17796903 17797029 -71707524 - L1MA8 LINE L1 -4311 2538 2408 400 263 177 27 chr17 17797035 17797273 -71707280 - L1M3 LINE L1 -391 5771 5509 914 266 38 42 chr17 17797301 17797725 -71706828 - L1ME1 LINE L1 -4 6162 5741 * 1170 253 72 75 chr17 17797721 17798605 -71705948 - L1M3 LINE L1 -815 5331 4450 293 287 0 32 chr17 17798615 17798709 -71705844 - L1M3 LINE L1 -1796 4350 4260 640 345 36 33 chr17 17798768 17799224 -71705329 + L1MA8 LINE L1 1 1658 -5838 1910 281 35 27 chr17 17799309 17800330 -71704223 + L1MA8 LINE L1 2213 3255 -4311 1611 247 57 14 chr17 17800343 17800927 -71703626 + L1MA8 LINE L1 6147 6755 -810 1925 197 8 50 chr17 17801083 17801585 -71702968 + L1MA8 LINE L1 7195 7675 -35 296 191 407 33 chr17 17801883 17802156 -71702397 - L2 LINE L2 -579 2735 2361 250 287 93 28 chr17 17802517 17802625 -71701928 + MIR SINE MIR 31 145 -63 382 315 35 35 chr17 17804793 17805082 -71699471 - SST1 Satellite centromeric -961 602 314 665 304 102 33 chr17 17805762 17806398 -71698155 - SST1 Satellite centromeric -847 716 37 1021 189 10 16 chr17 17806425 17807613 -71696940 + ALR/Alpha Satellite centromeric 1 1194 -1241 2179 105 3 13 chr17 17807613 17807926 -71696627 + AluSp SINE Alu 2 311 -2 1021 189 10 16 chr17 17807926 17808856 -71695697 + ALR/Alpha Satellite centromeric 1194 2417 -18 964 198 12 4 chr17 17808964 17810271 -71694282 + ALR/Alpha Satellite centromeric 1 1318 -83 1022 198 7 7 chr17 17810378 17815775 -71688778 + ALR/Alpha Satellite centromeric 1 5398 -1 740 222 12 33 chr17 17815878 17816377 -71688176 + ALR/Alpha Satellite centromeric 1 488 -10 976 194 8 9 chr17 17816392 17816446 -71688107 + ALR/Alpha Satellite centromeric 1 54 -4038 2314 100 0 0 chr17 17816446 17816746 -71687807 + AluY SINE Alu 2 301 -10 976 194 8 9 chr17 17816746 17820455 -71684098 + ALR/Alpha Satellite centromeric 54 4058 -34 1002 200 8 6 chr17 17820568 17823822 -71680731 + ALR/Alpha Satellite centromeric 1 3261 0 976 198 0 0 chr17 17823836 17824136 -71680417 + ALR/Alpha Satellite centromeric 1 300 -31 294 98 0 0 chr17 17824767 17824818 -71679735 + (CA)n Simple_repeat Simple_repeat 2 52 0 571 291 110 71 chr17 17824866 17826218 -71678335 - SST1 Satellite centromeric -27 1536 132 257 293 64 13 chr17 17827375 17827532 -71677021 - SST1 Satellite centromeric -9 1554 1390 432 304 99 38 chr17 17827722 17828308 -71676245 - SST1 Satellite centromeric -810 753 132 917 198 3 8 chr17 17828418 17829856 -71674697 + ALR/Alpha Satellite centromeric 1 1430 -48 874 202 9 12 chr17 17829994 17835127 -71669426 + ALR/Alpha Satellite centromeric 1 5418 -515 2403 92 0 3 chr17 17835127 17835431 -71669122 + AluY SINE Alu 1 303 -8 874 202 9 12 chr17 17835431 17835896 -71668657 + ALR/Alpha Satellite centromeric 5418 5883 -50 24 0 0 0 chr17 17888445 17888469 -71616084 + AT_rich Low_complexity Low_complexity 1 24 0 222 62 0 0 chr17 17889440 17889472 -71615081 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 831 192 0 7 chr17 17889625 17889771 -71614782 + FRAM SINE Alu 2 146 -30 223 216 119 172 chr17 17889781 17889915 -71614638 + MER5B DNA MER1_type 50 176 -2 319 274 65 32 chr17 17890062 17890186 -71614367 + L1MB1 LINE L1 4966 5093 -1053 22 94 0 0 chr17 17890204 17890268 -71614285 + AT_rich Low_complexity Low_complexity 1 64 0 4026 180 54 18 chr17 17890284 17890945 -71613608 + L1MB1 LINE L1 5266 5967 -201 2399 63 7 3 chr17 17890945 17891246 -71613307 + AluY SINE Alu 1 302 -9 4026 180 54 18 chr17 17891246 17891456 -71613097 + L1MB1 LINE L1 5967 6168 0 511 292 29 0 chr17 17891453 17891747 -71612806 + L1ME3 LINE L1 5191 5493 -669 * 763 134 0 17 chr17 17891748 17891867 -71612686 + FRAM SINE Alu 41 157 -19 1430 271 45 37 chr17 17891885 17892531 -71612022 + L1ME3 LINE L1 5495 6145 -17 387 234 201 33 chr17 17892572 17892756 -71611797 + L2 LINE L2 2522 2736 -578 740 208 19 16 chr17 17892880 17893339 -71611214 + ALR/Alpha Satellite centromeric 1 460 -18 929 191 0 0 chr17 17893382 17893539 -71611014 + AluJb SINE Alu 137 293 -19 2016 133 0 3 chr17 17893542 17893860 -71610693 + AluY SINE Alu 1 317 0 4668 176 34 10 chr17 17893865 17894805 -71609748 - L1MC2 LINE L1 -21 6323 5361 283 280 96 57 chr17 17895319 17895476 -71609077 - MIR SINE MIR -88 174 12 2003 142 3 3 chr17 17896125 17896428 -71608125 - AluSg SINE Alu -7 303 1 2158 99 3 0 chr17 17896763 17897083 -71607470 - AluSp SINE Alu 0 321 1 390 293 49 62 chr17 17897674 17897899 -71606654 + MIR SINE MIR 41 262 0 21 57 0 0 chr17 17897937 17897972 -71606581 + AT_rich Low_complexity Low_complexity 1 35 0 2616 87 30 5 chr17 17898147 17898515 -71606038 - L1PA7 LINE L1 -14 6140 5764 1317 263 96 27 chr17 17899269 17899707 -71604846 + LTR40a LTR ERVL 1 468 -51 360 0 0 0 chr17 17899743 17899783 -71604770 + (TA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr17 17900690 17900718 -71603835 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr17 17901591 17901614 -71602939 + AT_rich Low_complexity Low_complexity 1 23 0 7568 26 0 0 chr17 17901729 17903191 -71601362 - L1PA2 LINE L1 0 6155 4690 * 19528 34 2 1 chr17 17903188 17906344 -71598209 + L1PA3 LINE L1 2994 6150 -5 867 230 126 44 chr17 17906564 17906881 -71597672 - MLT1A2 LTR MaLR -47 343 1 * 948 184 39 30 chr17 17906881 17907114 -71597439 + Charlie1b DNA MER1_type 97 331 -192 1720 260 69 57 chr17 17907132 17907235 -71597318 + L1M4 LINE L1 3154 3254 -2892 2043 133 7 0 chr17 17907235 17907529 -71597024 + AluSq SINE Alu 3 298 -15 1720 260 69 57 chr17 17907529 17908409 -71596144 + L1M4 LINE L1 3254 4149 -1997 572 226 151 14 chr17 17908422 17908442 -71596111 + L1M4 LINE L1 4349 4365 -1781 1310 202 10 46 chr17 17908442 17908744 -71595809 + AluJo SINE Alu 1 291 -11 572 226 151 14 chr17 17908744 17908935 -71595618 + L1M4 LINE L1 4365 4589 -1557 473 254 65 82 chr17 17909786 17910418 -71594135 + HSREP522 Satellite telomeric 1 621 -388 217 303 16 16 chr17 17911618 17911740 -71592813 + CT-rich Low_complexity Low_complexity 2 123 0 847 108 69 0 chr17 17911900 17912030 -71592523 - MER85 DNA T2_type 0 139 1 1145 205 29 36 chr17 17913060 17913338 -71591215 + LOR1-int LTR ERV1 2079 2354 -3592 876 129 75 20 chr17 17913337 17913538 -71591015 + LOR1-int LTR ERV1 1839 2050 -6070 * 2133 184 61 4 chr17 17913547 17914020 -71590533 + LOR1-int LTR ERV1 2731 3230 -2716 1662 222 13 33 chr17 17914900 17915360 -71589193 + L1MB8 LINE L1 4132 4582 -1564 2120 205 45 53 chr17 17915360 17916063 -71588490 + L1MB8 LINE L1 4852 6178 0 2560 121 27 20 chr17 17916107 17916555 -71587998 - L1PB1 LINE L1 -3 6148 5698 33 25 0 0 chr17 17916811 17916851 -71587702 + AT_rich Low_complexity Low_complexity 1 40 0 738 211 0 32 chr17 17917660 17917816 -71586737 + MLT2B3 LTR ERVL 384 534 -20 333 147 0 67 chr17 17917820 17917846 -71586707 + Ricksha DNA DNA 840 866 -2380 279 0 0 0 chr17 17917846 17917877 -71586676 + (CA)n Simple_repeat Simple_repeat 2 32 0 333 147 0 67 chr17 17917877 17917925 -71586628 + Ricksha DNA DNA 866 909 -2337 959 247 121 53 chr17 17918229 17918609 -71585944 + MLT2B1 LTR ERVL 113 518 -2 24 67 0 0 chr17 17919419 17919464 -71585089 + AT_rich Low_complexity Low_complexity 1 45 0 473 296 30 56 chr17 17919574 17919807 -71584746 + MLT1E LTR MaLR 30 256 -337 505 180 20 20 chr17 17919870 17919970 -71584583 + MLT1E1 LTR MaLR 504 603 -51 25 31 0 0 chr17 17920000 17920032 -71584521 + AT_rich Low_complexity Low_complexity 1 32 0 1385 209 20 26 chr17 17920441 17920747 -71583806 + AluJo SINE Alu 1 304 -8 2048 115 11 0 chr17 17920908 17921218 -71583335 + AluSg SINE Alu 1 313 0 23 0 0 0 chr17 17921927 17921950 -71582603 + AT_rich Low_complexity Low_complexity 1 23 0 368 265 87 39 chr17 17923127 17923359 -71581194 - LTR33A LTR ERVL -176 347 66 21 0 0 0 chr17 17923835 17923856 -71580697 + AT_rich Low_complexity Low_complexity 1 21 0 7550 26 0 1 chr17 17923856 17925427 -71579126 - L1PA3 LINE L1 -8 6147 4579 11764 34 1 1 chr17 17925427 17926853 -71577700 + L1PA3 LINE L1 3177 4602 -1544 376 190 10 20 chr17 17928447 17928547 -71576006 + CT-rich Low_complexity Low_complexity 1 99 0 714 161 42 0 chr17 17932266 17932384 -71572169 + FLAM_C SINE Alu 1 123 -20 650 64 56 36 chr17 17932386 17932738 -71571815 + (TA)n Simple_repeat Simple_repeat 1 358 0 1583 123 16 118 chr17 17932941 17933314 -71571239 - MER1B DNA MER1_type 0 337 3 29 0 0 0 chr17 17933758 17933787 -71570766 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 17933841 17933869 -71570684 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 17933892 17933921 -71570632 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 17934777 17934801 -71569752 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 17934960 17934983 -71569570 + AT_rich Low_complexity Low_complexity 1 23 0 253 318 65 55 chr17 17935032 17935249 -71569304 - MIR SINE MIR -26 236 18 323 310 184 0 chr17 17935920 17936078 -71568475 + MIR SINE MIR 48 234 -28 223 288 14 27 chr17 17937653 17937799 -71566754 + (TTATA)n Simple_repeat Simple_repeat 3 146 0 389 156 0 0 chr17 17937800 17937864 -71566689 - MLT2B2 LTR ERVL -451 64 1 243 0 0 0 chr17 17938078 17938105 -71566448 + (T)n Simple_repeat Simple_repeat 1 27 0 240 377 8 8 chr17 17938459 17938581 -71565972 + Charlie8 DNA MER1_type 126 247 -2170 1138 188 17 77 chr17 17938737 17939024 -71565529 - AluJo SINE Alu -32 280 11 2175 74 40 10 chr17 17939477 17939774 -71564779 - AluYa5 SINE Alu -5 306 1 2230 79 3 0 chr17 17940775 17941066 -71563487 - AluY SINE Alu -1 310 19 698 64 0 0 chr17 17941796 17941890 -71562663 + AluY SINE Alu 217 310 -1 4000 175 12 33 chr17 17942594 17943440 -71561113 - L1MA7 LINE L1 -5 6286 5459 609 195 132 42 chr17 17943548 17943738 -71560815 - L1MA7 LINE L1 -933 5213 5007 223 217 0 0 chr17 17943756 17943802 -71560751 + L3 LINE CR1 1530 1575 -2 24 0 0 0 chr17 17946497 17946521 -71558032 + AT_rich Low_complexity Low_complexity 1 24 0 30 69 0 0 chr17 17946623 17946681 -71557872 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr17 17953567 17953588 -71550965 + AT_rich Low_complexity Low_complexity 1 21 0 7212 51 0 0 chr17 17956146 17957045 -71547508 - L1P LINE L1 -1111 5035 4137 488 291 55 25 chr17 17957046 17957245 -71547308 + L2 LINE L2 3109 3313 0 219 260 14 0 chr17 17957562 17957635 -71546918 + T-rich Low_complexity Low_complexity 2 75 0 21 0 0 0 chr17 17957853 17957874 -71546679 + AT_rich Low_complexity Low_complexity 1 21 0 1966 202 53 29 chr17 17958581 17959138 -71545415 + L1MB4 LINE L1 5710 6171 -9 357 125 0 0 chr17 17959141 17959197 -71545356 + (CA)n Simple_repeat Simple_repeat 2 57 0 270 225 56 0 chr17 17959198 17959287 -71545266 + (TA)n Simple_repeat Simple_repeat 2 95 0 308 200 0 105 chr17 17959297 17959392 -71545161 - MLT1C LTR MaLR -330 137 53 7595 30 0 0 chr17 17959588 17960619 -71543934 + L1PA3 LINE L1 5118 6155 0 234 188 0 0 chr17 17960630 17960678 -71543875 + A-rich Low_complexity Low_complexity 1 48 0 1440 239 68 14 chr17 17961064 17961236 -71543317 - MLT1A2 LTR MaLR -4 370 209 366 42 0 0 chr17 17961236 17961284 -71543269 + (GA)n Simple_repeat Simple_repeat 2 49 0 1440 239 68 14 chr17 17961284 17961462 -71543091 - MLT1A2 LTR MaLR -165 209 1 848 253 150 22 chr17 17961700 17961760 -71542793 - MLT1C LTR MaLR -3 464 413 258 32 0 0 chr17 17961760 17961791 -71542762 + (TAA)n Simple_repeat Simple_repeat 2 32 0 848 253 150 22 chr17 17961791 17962097 -71542456 - MLT1C LTR MaLR -54 413 51 22 70 0 0 chr17 17962998 17963041 -71541512 + AT_rich Low_complexity Low_complexity 1 43 0 31 68 0 0 chr17 17964348 17964407 -71540146 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr17 17964601 17964624 -71539929 + AT_rich Low_complexity Low_complexity 1 23 0 654 286 17 0 chr17 17964691 17964869 -71539684 + MIR SINE MIR 58 238 -24 29 47 0 0 chr17 17964871 17964914 -71539639 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr17 17964980 17965008 -71539545 + AT_rich Low_complexity Low_complexity 1 28 0 266 210 0 32 chr17 17965930 17965992 -71538561 - L2 LINE L2 0 3313 3254 949 261 44 41 chr17 17966501 17966819 -71537734 + L1MCa LINE L1 7 325 -6101 907 278 20 12 chr17 17966823 17967165 -71537388 + L1MCa LINE L1 2566 2910 -3516 390 275 18 18 chr17 17967229 17967338 -71537215 + MER5B DNA MER1_type 64 172 -6 25 51 0 0 chr17 17967473 17967512 -71537041 + AT_rich Low_complexity Low_complexity 1 39 0 380 80 16 277 chr17 17967533 17967721 -71536832 + L1MA8 LINE L1 6010 6148 -143 21 57 0 0 chr17 17968479 17968514 -71536039 + AT_rich Low_complexity Low_complexity 1 35 0 2053 133 0 0 chr17 17969293 17969628 -71534925 + AluSq SINE Alu 1 313 0 21 36 0 0 chr17 17971140 17971168 -71533385 + AT_rich Low_complexity Low_complexity 1 28 0 681 293 43 34 chr17 17971682 17972034 -71532519 - L1ME1 LINE L1 -2 6164 5810 * 4046 217 62 13 chr17 17972033 17973309 -71531244 - L1MC2 LINE L1 -8 6336 4901 1427 271 73 44 chr17 17973330 17974146 -71530407 - L1ME1 LINE L1 -363 5803 4967 23 33 0 0 chr17 17974160 17974190 -71530363 + AT_rich Low_complexity Low_complexity 1 30 0 1557 75 4 18 chr17 17974631 17974858 -71529695 - L1PA6 LINE L1 -7 6147 5924 1967 93 14 4 chr17 17975467 17975774 -71528779 - AluY SINE Alu 0 310 1 24 77 0 0 chr17 17975909 17975961 -71528592 + AT_rich Low_complexity Low_complexity 1 52 0 272 203 0 0 chr17 17976159 17976223 -71528330 + L1MA2 LINE L1 6241 6304 0 2916 97 0 35 chr17 17976353 17976817 -71527736 - LTR7 LTR ERV1 -2 448 1 819 142 0 0 chr17 17977508 17977635 -71526918 - AluSg/x SINE Alu -18 292 166 2374 128 3 10 chr17 17977725 17978109 -71526444 - L1PA13 LINE L1 -6 6157 5777 217 228 33 11 chr17 17978188 17978280 -71526273 + (TAGA)n Simple_repeat Simple_repeat 2 95 0 235 250 11 11 chr17 17978299 17978387 -71526166 - L1MC4 LINE L1 -1340 6702 6615 457 214 0 16 chr17 17978397 17978579 -71525974 + (TA)n Simple_repeat Simple_repeat 1 179 0 180 27 81 0 chr17 17978601 17978638 -71525915 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1200 280 81 41 chr17 17978670 17979100 -71525453 + L1ME3A LINE L1 2292 2703 -3443 508 29 29 0 chr17 17979100 17979170 -71525383 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 1200 280 81 41 chr17 17979170 17979909 -71524644 + L1ME3A LINE L1 2703 3508 -2638 560 277 100 59 chr17 17979986 17980615 -71523938 + L1ME3A LINE L1 4422 5076 -1070 1423 175 34 20 chr17 17980841 17981133 -71523420 + AluJb SINE Alu 1 296 -16 22 56 0 0 chr17 17981207 17981243 -71523310 + AT_rich Low_complexity Low_complexity 1 36 0 323 325 84 40 chr17 17981264 17981513 -71523040 + L1ME3A LINE L1 5417 5676 -494 221 200 0 36 chr17 17981513 17981568 -71522985 + (TATG)n Simple_repeat Simple_repeat 3 55 0 277 301 53 15 chr17 17981577 17981710 -71522843 + L1ME3A LINE L1 5657 5794 -376 310 316 92 31 chr17 17981750 17981946 -71522607 + L1ME3A LINE L1 5963 6170 0 444 322 62 5 chr17 17981988 17982196 -71522357 + MIR SINE MIR 32 251 -11 21 57 0 0 chr17 17982196 17982231 -71522322 + AT_rich Low_complexity Low_complexity 1 35 0 180 399 22 29 chr17 17982561 17982699 -71521854 - L2 LINE L2 -209 3063 2927 297 0 0 0 chr17 17982898 17982931 -71521622 + (CA)n Simple_repeat Simple_repeat 2 34 0 1259 256 55 39 chr17 17983962 17984474 -71520079 + L1ME3A LINE L1 5651 6170 0 1689 189 7 0 chr17 17984528 17984835 -71519718 + AluJb SINE Alu 4 312 0 251 106 21 21 chr17 17984976 17985023 -71519530 - HERVL LTR ERVL -3762 1892 1846 517 375 37 17 chr17 17985132 17985540 -71519013 - HERVL LTR ERVL -4011 1753 1338 224 333 0 12 chr17 17986256 17986337 -71518216 + L2 LINE L2 3234 3313 0 198 262 49 0 chr17 17986441 17986502 -71518051 - L2 LINE L2 -1497 1817 1754 421 66 16 0 chr17 17986574 17986635 -71517918 - L1MA9 LINE L1 -167 6145 6084 245 318 88 0 chr17 17989067 17989237 -71515316 + L1M4 LINE L1 3805 3989 -2157 1680 201 54 44 chr17 17989807 17990216 -71514337 + MSTC LTR MaLR 16 428 0 1015 368 49 76 chr17 17990703 17991097 -71513456 + L2 LINE L2 1345 1748 -1566 687 78 10 0 chr17 17991097 17991200 -71513353 - L1PA13 LINE L1 0 6163 6060 1015 368 49 76 chr17 17991200 17991858 -71512695 + L2 LINE L2 1748 2369 -945 1085 121 0 0 chr17 17991860 17992009 -71512544 - AluY SINE Alu -162 149 1 190 27 0 81 chr17 17992936 17992973 -71511580 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 750 231 160 53 chr17 17993427 17993764 -71510789 + MLT1A2 LTR MaLR 2 374 0 2133 97 10 0 chr17 17994136 17994424 -71510129 - AluSq SINE Alu -22 291 1 1286 176 81 18 chr17 17994523 17994795 -71509758 + MER7A DNA MER2_type 4 290 -56 1226 139 23 19 chr17 17994790 17995006 -71509547 + MER67C LTR ERV1 494 710 0 * 22 0 0 0 chr17 17995420 17995442 -71509111 + AT_rich Low_complexity Low_complexity 1 22 0 195 400 88 0 chr17 17996430 17996555 -71507998 + L2 LINE L2 3137 3272 0 265 177 42 21 chr17 17996559 17996655 -71507898 + (TA)n Simple_repeat Simple_repeat 2 99 0 207 69 0 0 chr17 17996658 17996687 -71507866 + (CA)n Simple_repeat Simple_repeat 2 30 0 2102 129 0 13 chr17 17997634 17997944 -71506609 - AluSx SINE Alu -6 306 1 30 27 0 0 chr17 17997952 17997989 -71506564 + AT_rich Low_complexity Low_complexity 1 37 0 237 358 30 15 chr17 17998054 17998188 -71506365 + L2 LINE L2 2231 2366 -948 572 227 17 160 chr17 17998238 17998476 -71506077 - MER20 DNA MER1_type -15 204 1 186 182 23 23 chr17 17998946 17998990 -71505563 + MIR SINE MIR 216 259 -3 22 56 0 0 chr17 17999928 17999964 -71504589 + AT_rich Low_complexity Low_complexity 1 36 0 301 295 0 0 chr17 18001162 18001223 -71503330 + MER45 DNA AcHobo 12 72 -1509 422 233 44 0 chr17 18001515 18001605 -71502948 + MER58B DNA MER1_type 245 338 -3 387 238 67 113 chr17 18001752 18001992 -71502561 + MLT1C LTR MaLR 8 236 -231 704 266 49 45 chr17 18002015 18002282 -71502271 + MLT1C LTR MaLR 192 459 -8 243 103 0 0 chr17 18003711 18003750 -71500803 + (TG)n Simple_repeat Simple_repeat 2 40 0 2322 70 3 19 chr17 18004373 18004686 -71499867 - AluY SINE Alu -3 308 1 734 86 138 0 chr17 18005104 18005220 -71499333 + MER39 LTR ERV1 1 132 -575 2091 132 81 51 chr17 18005220 18005629 -71498924 - MER4B LTR ERV1 -186 424 4 566 193 187 36 chr17 18005650 18005816 -71498737 + MER34C LTR ERV1 4 194 -391 3173 159 40 10 chr17 18005818 18005840 -71498713 + LTR49 LTR ERV1 1 21 -574 1693 170 43 32 chr17 18005840 18006211 -71498342 - THE1C LTR MaLR 0 375 1 3173 159 40 10 chr17 18006211 18006766 -71497787 + LTR49 LTR ERV1 21 595 0 266 220 127 17 chr17 18006815 18006933 -71497620 + LTR48 LTR ERV1 356 486 -301 318 219 101 17 chr17 18006965 18007084 -71497469 + LTR48 LTR ERV1 609 737 -50 1577 198 52 6 chr17 18007254 18007582 -71496971 + MER61A LTR ERV1 1 343 0 991 159 6 0 chr17 18007622 18007779 -71496774 + AluJo SINE Alu 12 169 -143 577 274 84 26 chr17 18007990 18008180 -71496373 - MER67D LTR ERV1 -8 506 306 1191 239 6 61 chr17 18008227 18008554 -71495999 - MER67D LTR ERV1 -203 311 3 3720 101 18 2 chr17 18008587 18009132 -71495421 + MER41A LTR ERV1 1 554 0 23 54 0 0 chr17 18010446 18010483 -71494070 + AT_rich Low_complexity Low_complexity 1 37 0 1851 153 19 7 chr17 18011346 18011653 -71492900 + MER7A DNA MER2_type 2 310 -36 2308 70 7 3 chr17 18011671 18011970 -71492583 - AluY SINE Alu -5 306 7 1507 80 0 15 chr17 18011980 18012180 -71492373 - AluSc SINE Alu -20 289 93 375 265 68 14 chr17 18012917 18013064 -71491489 - MER106B DNA MER1_type -1 1058 904 208 310 42 0 chr17 18014005 18014076 -71490477 + L2 LINE L2 2996 3069 -203 193 135 39 0 chr17 18014241 18014293 -71490260 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 225 218 39 13 chr17 18015266 18015344 -71489209 + A-rich Low_complexity Low_complexity 5 84 0 21 82 0 0 chr17 18016309 18016358 -71488195 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr17 18016563 18016585 -71487968 + (TA)n Simple_repeat Simple_repeat 1 22 0 230 210 48 0 chr17 18019926 18019988 -71484565 - L1ME LINE L1 -237 5929 5865 2159 80 17 10 chr17 18020190 18020478 -71484075 + AluY SINE Alu 1 290 -21 423 184 80 16 chr17 18020496 18020621 -71483932 + L1 LINE L1 5191 5323 -823 210 375 0 0 chr17 18021534 18021630 -71482923 + CT-rich Low_complexity Low_complexity 4 99 0 1678 214 3 3 chr17 18022765 18023068 -71481485 + AluJo SINE Alu 2 304 -8 966 96 0 22 chr17 18023352 18023487 -71481066 - FLAM_C SINE Alu 0 133 2 809 295 76 28 chr17 18024781 18025279 -71479274 + MER90 LTR ERV1 70 591 -23 320 204 75 11 chr17 18025637 18025730 -71478823 + L1MD3 LINE L1 7897 7995 0 303 279 84 58 chr17 18026137 18026291 -71478262 - L1ME LINE L1 -5591 479 322 535 157 14 29 chr17 18026298 18026438 -71478115 + C-rich Low_complexity Low_complexity 5 142 0 1207 165 10 0 chr17 18026438 18026632 -71477921 - AluJo SINE Alu -45 267 72 3599 43 39 2 chr17 18027902 18028344 -71476209 + L1PA6 LINE L1 5693 6150 -4 256 320 16 25 chr17 18029349 18029471 -71475082 + G-rich Low_complexity Low_complexity 1 121 0 290 302 11 44 chr17 18029608 18029790 -71474763 + G-rich Low_complexity Low_complexity 2 177 0 209 270 0 59 chr17 18029848 18030000 -71474553 + GA-rich Low_complexity Low_complexity 3 145 0 21 36 0 0 chr17 18032111 18032139 -71472414 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 18032654 18032683 -71471870 + AT_rich Low_complexity Low_complexity 1 29 0 187 337 163 12 chr17 18033473 18033559 -71470994 + MIR SINE MIR 156 254 -8 240 235 0 0 chr17 18033721 18033772 -71470781 - MLT1E1 LTR MaLR 0 593 543 1112 217 37 51 chr17 18033832 18033922 -71470631 - MLT1E1 LTR MaLR -303 351 261 1767 141 79 7 chr17 18033922 18034213 -71470340 - AluJb SINE Alu 0 312 1 1112 217 37 51 chr17 18034213 18034477 -71470076 - MLT1E1 LTR MaLR -393 261 2 2803 136 7 15 chr17 18036779 18037236 -71467317 + L1PA16 LINE L1 5705 6157 -9 39040 73 9 1 chr17 18038777 18044323 -71460230 + L1P2 LINE L1 11 5595 -559 262 221 39 26 chr17 18044437 18044591 -71459962 + (TGGG)n Simple_repeat Simple_repeat 1 156 0 * 377 197 0 83 chr17 18044502 18044695 -71459858 + G-rich Low_complexity Low_complexity 2 178 0 5344 78 0 1 chr17 18044722 18045414 -71459139 + L1PA5 LINE L1 5462 6152 -2 794 208 72 5 chr17 18046442 18046649 -71457904 - L1M4 LINE L1 -5144 1398 1178 1621 156 8 4 chr17 18046651 18046908 -71457645 + AluSq SINE Alu 1 258 -55 1698 153 39 0 chr17 18047012 18047290 -71457263 + AluJo SINE Alu 21 308 0 1721 274 93 28 chr17 18047292 18048033 -71456520 - L1M4 LINE L1 -5731 811 23 494 276 136 5 chr17 18048043 18048264 -71456289 + Charlie2 DNA MER1_type 69 318 -2464 1357 218 57 35 chr17 18048283 18048773 -71455780 + Charlie2 DNA MER1_type 1866 2366 -496 266 307 24 24 chr17 18049838 18049965 -71454588 + MLT1J2 LTR MaLR 80 206 -244 462 276 50 50 chr17 18050392 18050478 -71454075 - MIR SINE MIR -21 241 156 1978 158 3 13 chr17 18050478 18050789 -71453764 - AluJo SINE Alu -4 308 1 462 276 50 50 chr17 18050789 18050923 -71453630 - MIR SINE MIR -105 157 21 743 175 8 0 chr17 18051283 18051403 -71453150 - FLAM_C SINE Alu -21 122 2 275 317 50 0 chr17 18051449 18051550 -71453003 - MIR SINE MIR -148 114 9 1490 150 4 77 chr17 18051867 18052141 -71452412 - AluJo SINE Alu -54 258 5 972 210 38 0 chr17 18052885 18052952 -71451601 - AluJo SINE Alu -117 195 132 180 0 0 0 chr17 18052952 18052972 -71451581 + (TTA)n Simple_repeat Simple_repeat 2 21 0 972 210 38 0 chr17 18052972 18053090 -71451463 - AluJo SINE Alu -180 132 3 406 290 101 34 chr17 18053109 18053347 -71451206 + MIR SINE MIR 2 255 -7 316 343 35 0 chr17 18053357 18053529 -71451024 + L1ME3A LINE L1 5988 6165 -5 579 281 65 84 chr17 18055928 18056451 -71448102 + MER34 LTR ERV1 1 513 -29 1514 224 45 65 chr17 18056927 18057604 -71446949 + LTR49-int LTR ERV1 368 1452 -4494 331 246 96 141 chr17 18058283 18058559 -71445994 + L1MEc LINE L1 1994 2281 -3934 1919 175 3 0 chr17 18058559 18058867 -71445686 + AluSx SINE Alu 1 309 -3 331 246 96 141 chr17 18058867 18059074 -71445479 + L1MEc LINE L1 2281 3341 -2874 1352 153 5 5 chr17 18059403 18059625 -71444928 + L1M2 LINE L1 5527 5748 -543 595 216 88 68 chr17 18059625 18059875 -71444678 - LTR48B LTR ERV1 0 644 390 351 278 51 17 chr17 18059927 18060129 -71444424 - LTR48 LTR ERV1 -375 279 9 813 180 6 35 chr17 18060154 18060326 -71444227 + L1MA9 LINE L1 5740 5906 -406 428 162 0 0 chr17 18060327 18060395 -71444158 + Tigger2 DNA MER2_type 2 69 -2649 * 2445 157 25 11 chr17 18060393 18060826 -71443727 + Tigger2 DNA MER2_type 2280 2718 0 1674 146 65 63 chr17 18060855 18060969 -71443584 + L1MA9 LINE L1 5921 6033 -279 2058 138 3 0 chr17 18060969 18061282 -71443271 + AluSx SINE Alu 1 314 0 1674 146 65 63 chr17 18061282 18061549 -71443004 + L1MA9 LINE L1 6033 6304 -8 554 299 68 21 chr17 18061730 18062068 -71442485 + L1MEd LINE L1 897 1250 -4869 1578 235 70 79 chr17 18062144 18062885 -71441668 + L1MC4 LINE L1 7267 8013 -29 2773 53 0 0 chr17 18062885 18063226 -71441327 - L1PA4 LINE L1 -3 6152 5812 1932 128 8 0 chr17 18063227 18063493 -71441060 - AluSx SINE Alu -44 268 1 1578 235 70 79 chr17 18063493 18063531 -71441022 + L1MC4 LINE L1 8012 8041 -1 1869 167 3 10 chr17 18063600 18063900 -71440653 - AluSx SINE Alu -14 298 1 2660 198 92 2 chr17 18064067 18064613 -71439940 + LTR49 LTR ERV1 1 595 0 2064 178 34 36 chr17 18064615 18065087 -71439466 + LTR49-int LTR ERV1 1 472 -5474 1811 145 40 14 chr17 18065087 18065384 -71439169 + AluSx SINE Alu 1 305 -7 2064 178 34 36 chr17 18065384 18065798 -71438755 + LTR49-int LTR ERV1 472 1472 -4474 2430 77 31 0 chr17 18065798 18066122 -71438431 + L1PA10 LINE L1 5835 6168 0 429 188 0 24 chr17 18066224 18066309 -71438244 + LTR49-int LTR ERV1 760 842 -5489 2723 164 18 64 chr17 18066345 18066720 -71437833 + LTR49-int LTR ERV1 841 1190 -5141 2120 126 0 7 chr17 18066720 18067014 -71437539 - AluSc SINE Alu -17 292 1 2723 164 18 64 chr17 18067014 18067232 -71437321 + LTR49-int LTR ERV1 1190 1416 -4915 1011 138 36 6 chr17 18067315 18067482 -71437071 + LTR49-int LTR ERV1 1372 1543 -4788 1852 138 4 4 chr17 18067499 18067775 -71436778 + AluJb SINE Alu 22 297 -15 1460 181 64 0 chr17 18067781 18067942 -71436611 - AluSx SINE Alu -13 299 113 225 0 0 0 chr17 18067942 18067967 -71436586 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1460 181 64 0 chr17 18067967 18068070 -71436483 - AluSx SINE Alu -199 113 18 1294 163 107 63 chr17 18068127 18068276 -71436277 + AluJo SINE Alu 1 169 -143 2375 84 7 0 chr17 18068276 18068572 -71435981 + AluSp SINE Alu 1 298 -15 1294 163 107 63 chr17 18068572 18068692 -71435861 + AluJo SINE Alu 169 282 -30 207 114 0 0 chr17 18068695 18068730 -71435823 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 432 194 41 10 chr17 18068730 18068828 -71435725 + LTR49-int LTR ERV1 3124 3224 -3107 6477 155 45 32 chr17 18068845 18070171 -71434382 + LTR49-int LTR ERV1 3703 5045 -1286 6663 125 16 10 chr17 18070271 18071300 -71433253 + LTR49-int LTR ERV1 5013 6047 -284 894 111 25 25 chr17 18071292 18071454 -71433099 + LTR49-int LTR ERV1 6169 6330 -1 * 575 85 0 12 chr17 18071537 18071619 -71432934 + LTR49 LTR ERV1 38 118 -477 1359 158 54 170 chr17 18071671 18072119 -71432434 - MSTD LTR MaLR 0 396 1 1368 233 119 2 chr17 18072224 18072670 -71431883 - MLT1D LTR MaLR -7 498 1 499 208 9 9 chr17 18074655 18074761 -71429792 + MER70B LTR ERVL 472 577 -1 1996 200 60 74 chr17 18075961 18076530 -71428023 + MER72 LTR ERV1 3 563 -159 1273 131 48 0 chr17 18076540 18076746 -71427807 - MER2 DNA MER2_type 0 345 130 1067 93 50 0 chr17 18076771 18076932 -71427621 - MER30 DNA MER1_type -61 169 1 529 183 11 0 chr17 18076932 18077023 -71427530 - MER2 DNA MER2_type -206 139 48 4328 189 24 15 chr17 18077116 18077900 -71426653 - MER21B LTR ERV1 -72 791 1 1696 171 10 24 chr17 18078054 18078372 -71426181 - AluJo SINE Alu 0 314 1 952 162 279 9 chr17 18078417 18078639 -71425914 + MER49 LTR ERV1 1 282 -641 1524 188 32 20 chr17 18078671 18079012 -71425541 + MER4D LTR ERV1 549 893 -10 1493 222 172 0 chr17 18079574 18080016 -71424537 - L1MB7 LINE L1 -7 6177 5660 300 83 0 0 chr17 18080582 18080630 -71423923 + (TG)n Simple_repeat Simple_repeat 2 49 0 1842 205 73 62 chr17 18081100 18081651 -71422902 - MER89 LTR ERV1 -2 557 1 227 247 0 27 chr17 18083770 18083843 -71420710 + (TTA)n Simple_repeat Simple_repeat 3 73 0 233 250 0 0 chr17 18084012 18084068 -71420485 - L1MB7 LINE L1 -574 5668 5613 2575 191 53 4 chr17 18084073 18084580 -71419973 - MER34 LTR ERV1 0 542 11 1067 241 59 46 chr17 18084611 18084873 -71419680 - L1MB7 LINE L1 -751 5395 5138 2358 199 18 64 chr17 18084873 18085470 -71419083 - MER101B LTR ERV1 0 570 1 1067 241 59 46 chr17 18085470 18085618 -71418935 - L1MB7 LINE L1 -1008 5138 5175 2161 128 0 0 chr17 18085618 18085915 -71418638 + AluSg SINE Alu 1 297 -13 1067 241 59 46 chr17 18085915 18086130 -71418423 - L1MB7 LINE L1 -970 5176 4965 4784 130 113 11 chr17 18086144 18086951 -71417602 - MER49 LTR ERV1 -21 902 14 325 258 156 16 chr17 18087006 18087192 -71417361 - L1MB7 LINE L1 -1212 4934 4723 3106 164 28 5 chr17 18087404 18087970 -71416583 - L1MA7 LINE L1 -1 6290 5712 29 98 0 0 chr17 18089459 18089551 -71415002 + AT_rich Low_complexity Low_complexity 1 92 0 281 220 30 23 chr17 18090102 18090234 -71414319 + (TA)n Simple_repeat Simple_repeat 1 133 0 228 111 0 0 chr17 18090306 18090342 -71414211 + (TAG)n Simple_repeat Simple_repeat 1 36 0 670 197 130 14 chr17 18090513 18090632 -71413921 + MER89 LTR ERV1 218 322 -237 1249 236 67 98 chr17 18090632 18091263 -71413290 + LTR9 LTR ERV1 2 612 0 670 197 130 14 chr17 18091263 18091366 -71413187 + MER89 LTR ERV1 322 466 -93 2387 147 11 69 chr17 18091378 18091638 -71412915 + L1MC1 LINE L1 5846 6067 -266 4508 138 19 38 chr17 18091638 18092432 -71412121 + MER4E LTR ERV1 1 779 0 2387 147 11 69 chr17 18092432 18092647 -71411906 + L1MC1 LINE L1 6067 6293 -40 881 241 30 31 chr17 18092659 18093149 -71411404 - MER34B LTR ERV1 -12 530 1 951 241 128 48 chr17 18093213 18093743 -71410810 + MER34C LTR ERV1 1 786 -1 1240 176 39 19 chr17 18093916 18093979 -71410574 + LTR54 LTR ERV1 1 61 -449 4459 157 15 18 chr17 18093979 18094764 -71409789 + LTR39 LTR ERV1 1 783 0 1240 176 39 19 chr17 18094764 18095141 -71409412 + LTR54 LTR ERV1 61 510 0 489 227 0 9 chr17 18095790 18095900 -71408653 - L1MC/D LINE L1 -586 5773 5665 291 229 43 0 chr17 18095988 18096058 -71408495 - MER77 LTR ERV1 -366 239 167 184 303 61 10 chr17 18096203 18096302 -71408251 - L3 LINE CR1 -106 1471 1368 1804 172 3 14 chr17 18096555 18096852 -71407701 - AluJb SINE Alu -13 299 6 1909 137 28 0 chr17 18096897 18097181 -71407372 + AluSx SINE Alu 1 292 -20 250 218 10 0 chr17 18097444 18097521 -71407032 + MER5A DNA MER1_type 4 81 -108 2155 131 0 0 chr17 18098087 18098378 -71406175 - AluSx SINE Alu -21 291 1 2503 81 0 0 chr17 18099177 18099486 -71405067 + AluY SINE Alu 1 309 -2 214 265 41 10 chr17 18100223 18100321 -71404232 + MER5A DNA MER1_type 9 109 -80 316 257 27 112 chr17 18100383 18100570 -71403983 - MER5A DNA MER1_type 0 189 19 547 113 12 0 chr17 18100681 18100761 -71403792 + AluJ/FLAM SINE Alu 11 91 -221 29 0 0 0 chr17 18101481 18101510 -71403043 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 18102067 18102095 -71402458 + AT_rich Low_complexity Low_complexity 1 28 0 327 85 0 0 chr17 18102193 18102240 -71402313 + (CA)n Simple_repeat Simple_repeat 1 47 0 1231 178 14 0 chr17 18102707 18102915 -71401638 - HERVL74 LTR ERVL -3657 2028 1818 863 150 0 0 chr17 18102915 18103048 -71401505 + AluJb SINE Alu 159 291 -21 201 132 0 0 chr17 18103076 18103114 -71401439 + (CA)n Simple_repeat Simple_repeat 1 38 0 213 247 124 22 chr17 18103481 18103570 -71400983 + MIR SINE MIR 149 246 -16 1633 173 11 0 chr17 18103701 18103979 -71400574 - AluJb SINE Alu -30 282 2 231 212 91 15 chr17 18104910 18104976 -71399577 - L1P LINE L1 -3329 2817 2747 463 239 58 85 chr17 18105323 18105653 -71398900 - L2 LINE L2 -539 2775 2455 252 270 27 47 chr17 18105691 18105893 -71398660 - L2 LINE L2 -1083 2231 1959 1099 208 5 0 chr17 18106343 18106540 -71398013 + AluJo SINE Alu 10 207 -105 269 213 37 0 chr17 18107787 18107895 -71396658 + (CGGGG)n Simple_repeat Simple_repeat 3 114 0 234 231 0 0 chr17 18109286 18109351 -71395202 - MIR SINE MIR -34 228 164 21 0 0 0 chr17 18109638 18109659 -71394894 + AT_rich Low_complexity Low_complexity 1 21 0 1976 67 0 8 chr17 18109843 18110081 -71394472 + AluY SINE Alu 69 304 -7 289 313 99 8 chr17 18110238 18110369 -71394184 + L1MEd LINE L1 554 696 -5509 306 274 26 8 chr17 18110578 18110695 -71393858 + L1M3de LINE L1 1784 1902 -4751 * 1532 225 69 14 chr17 18110694 18111130 -71393423 + L1MEd LINE L1 1640 2099 -4297 3612 84 2 8 chr17 18111134 18111634 -71392919 + L1PB1 LINE L1 5294 5790 -361 241 152 0 0 chr17 18111660 18111706 -71392847 + LTR66 LTR ERVL 394 439 -171 2636 91 14 6 chr17 18111731 18112095 -71392458 + L1PB1 LINE L1 5783 6149 -2 1499 293 84 11 chr17 18112103 18112710 -71391843 - L2 LINE L2 -1213 2101 1451 2411 97 0 0 chr17 18113370 18113668 -71390885 + AluY SINE Alu 1 298 -13 4183 232 42 24 chr17 18113692 18114281 -71390272 + L1MEd LINE L1 2111 2688 -3527 2111 128 3 3 chr17 18114281 18114597 -71389956 + AluSx SINE Alu 2 312 0 4183 232 42 24 chr17 18114597 18115470 -71389083 + L1MEd LINE L1 2688 3557 -2658 232 143 0 0 chr17 18115477 18115512 -71389041 - U2 snRNA snRNA -153 35 1 1472 164 0 29 chr17 18115541 18115779 -71388774 + AluSq SINE Alu 1 231 -82 6422 116 31 18 chr17 18115779 18116819 -71387734 + MER11C LTR ERVK 15 1067 -4 561 110 0 0 chr17 18116820 18116902 -71387651 + AluSg/x SINE Alu 213 294 -15 1951 136 6 29 chr17 18116903 18117219 -71387334 + AluSx SINE Alu 3 311 -1 3742 239 27 16 chr17 18117220 18118054 -71386499 + L1MEd LINE L1 3571 4423 -1792 492 165 18 0 chr17 18118054 18118163 -71386390 + L1MA8 LINE L1 6177 6287 -4 3742 239 27 16 chr17 18118163 18118422 -71386131 + L1MEd LINE L1 4423 4677 -1538 3445 150 39 18 chr17 18118680 18119352 -71385201 - L1MB3 LINE L1 -202 5981 5296 1019 246 123 3 chr17 18119466 18119646 -71384907 - L1ME3A LINE L1 -8 6162 5983 1139 257 86 29 chr17 18119646 18120444 -71384109 - L1MB1 LINE L1 -242 5947 5079 427 270 14 54 chr17 18121306 18121454 -71383099 + L1ME1 LINE L1 5946 6087 -79 1445 223 45 34 chr17 18122519 18122965 -71381588 - LTR43 LTR ERV1 0 634 120 2866 134 4 2 chr17 18123729 18124191 -71380362 - MER4C LTR ERV1 -2 463 1 3061 134 24 26 chr17 18124480 18125055 -71379498 - MER4B LTR ERV1 -36 574 1 3680 159 21 3 chr17 18125055 18126056 -71378497 - MER4B-int LTR ERV1 0 6758 5705 6473 133 25 3 chr17 18126060 18127054 -71377499 - L1P LINE L1 -1456 4690 3668 324 0 0 0 chr17 18127054 18127090 -71377463 + (TG)n Simple_repeat Simple_repeat 2 37 0 6473 133 25 3 chr17 18127090 18127182 -71377371 - L1P LINE L1 -2478 3668 3580 3728 120 11 5 chr17 18127171 18128181 -71376372 + L1PA8A LINE L1 4693 5709 -422 * 333 0 0 0 chr17 18128869 18128906 -71375647 + (CA)n Simple_repeat Simple_repeat 2 38 0 2925 269 48 36 chr17 18128996 18130531 -71374022 - SST1 Satellite centromeric -11 1552 1 336 24 0 0 chr17 18131231 18131272 -71373281 + (CA)n Simple_repeat Simple_repeat 2 42 0 2910 269 48 36 chr17 18131368 18132898 -71371655 - SST1 Satellite centromeric -15 1548 1 423 0 0 0 chr17 18133597 18133644 -71370909 + (CA)n Simple_repeat Simple_repeat 2 48 0 2909 269 48 36 chr17 18133740 18135270 -71369283 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 18135970 18136023 -71368530 + (CA)n Simple_repeat Simple_repeat 2 54 0 2906 270 50 35 chr17 18136119 18137645 -71366908 - SST1 Satellite centromeric -15 1548 1 444 19 0 0 chr17 18138345 18138398 -71366155 + (CA)n Simple_repeat Simple_repeat 2 54 0 2351 262 56 42 chr17 18138494 18139806 -71364747 - SST1 Satellite centromeric -15 1548 219 2694 168 63 26 chr17 18140082 18140525 -71364028 + MER4B-int LTR ERV1 5099 5571 -1187 1270 179 124 43 chr17 18140525 18140872 -71363681 - THE1C LTR MaLR 0 375 1 2694 168 63 26 chr17 18140872 18141031 -71363522 + MER4B-int LTR ERV1 5571 5723 -1035 5749 97 4 0 chr17 18141033 18141855 -71362698 - L1PA8A LINE L1 -2 6129 5305 1680 135 17 7 chr17 18141955 18142244 -71362309 + L1PA8A LINE L1 5838 6129 -2 3310 152 55 31 chr17 18142246 18142405 -71362148 - MER4B-int LTR ERV1 -1035 5723 5569 1270 179 124 43 chr17 18142405 18142752 -71361801 + THE1C LTR MaLR 1 375 0 3310 152 55 31 chr17 18142752 18143295 -71361258 - MER4B-int LTR ERV1 -1189 5569 5004 834 178 25 0 chr17 18143285 18143442 -71361111 - MER4B-int LTR ERV1 -2277 4481 4321 * 855 214 44 15 chr17 18143446 18143652 -71360901 - MER4B-int LTR ERV1 -2572 4186 3975 1119 282 28 23 chr17 18143666 18144056 -71360497 - SST1 Satellite centromeric -1171 392 1 191 125 25 0 chr17 18144787 18144827 -71359726 + GA-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 18144834 18144875 -71359678 + (CA)n Simple_repeat Simple_repeat 2 42 0 1852 273 89 38 chr17 18144908 18146001 -71358552 - SST1 Satellite centromeric -21 1542 395 438 259 56 35 chr17 18146024 18146221 -71358332 - SST1 Satellite centromeric -1362 201 1 243 103 0 0 chr17 18146918 18146957 -71357596 + (CA)n Simple_repeat Simple_repeat 2 40 0 2585 286 55 40 chr17 18147047 18148576 -71355977 - SST1 Satellite centromeric -11 1552 1 459 0 0 0 chr17 18149276 18149327 -71355226 + (CA)n Simple_repeat Simple_repeat 2 52 0 2846 270 51 36 chr17 18149423 18150948 -71353605 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 18151648 18151701 -71352852 + (CA)n Simple_repeat Simple_repeat 2 54 0 2863 269 48 36 chr17 18151797 18153326 -71351227 - SST1 Satellite centromeric -15 1548 1 731 306 92 33 chr17 18153729 18154396 -71350157 - SST1 Satellite centromeric -11 1552 847 951 259 4 16 chr17 18154397 18154644 -71349909 - AluJo SINE Alu -54 258 15 1049 210 55 107 chr17 18155899 18156284 -71348269 - MLT1A1 LTR MaLR 0 365 1 758 261 78 52 chr17 18156643 18156965 -71347588 - L1P4 LINE L1 -364 5804 5492 2398 92 5 43 chr17 18156965 18157334 -71347219 + THE1A LTR MaLR 1 355 0 10779 117 2 1 chr17 18157334 18158913 -71345640 + THE1A-int LTR MaLR 1 1580 0 2038 156 23 0 chr17 18158913 18159260 -71345293 + THE1A LTR MaLR 1 355 0 758 261 78 52 chr17 18159260 18159571 -71344982 - L1P4 LINE L1 -676 5492 5190 1683 146 107 7 chr17 18159571 18159852 -71344701 - AluSx SINE Alu -1 311 3 758 261 78 52 chr17 18159852 18160343 -71344210 - L1P4 LINE L1 -978 5190 4647 27 0 0 0 chr17 18160354 18160381 -71344172 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr17 18160381 18160403 -71344150 + (GA)n Simple_repeat Simple_repeat 2 23 0 1465 189 0 42 chr17 18160403 18160688 -71343865 - AluJo SINE Alu -39 273 1 21 36 0 0 chr17 18161449 18161477 -71343076 + AT_rich Low_complexity Low_complexity 1 28 0 2156 121 0 0 chr17 18161654 18161961 -71342592 - AluSq SINE Alu 0 307 1 321 284 37 9 chr17 18162005 18162114 -71342439 - HAL1b LINE L1 -1 1347 1236 1889 162 3 3 chr17 18162188 18162485 -71342068 - AluSx SINE Alu -13 299 3 734 197 0 0 chr17 18162710 18162842 -71341711 - FLAM_C SINE Alu -1 132 1 1651 177 7 17 chr17 18163301 18163601 -71340952 + AluJb SINE Alu 1 297 -15 4263 141 46 4 chr17 18163603 18164283 -71340270 + Tigger1 DNA MER2_type 1066 1773 -645 2072 120 41 0 chr17 18164283 18164574 -71339979 - AluSp SINE Alu -10 303 1 770 258 36 10 chr17 18164631 18164825 -71339728 + MER115 DNA AcHobo 445 643 -50 305 99 50 20 chr17 18165006 18165107 -71339446 + (TTATA)n Simple_repeat Simple_repeat 2 105 0 3739 131 14 44 chr17 18165128 18165630 -71338923 + Tigger1 DNA MER2_type 1802 2283 -135 1940 126 40 0 chr17 18165630 18165908 -71338645 - AluSx SINE Alu -22 290 2 3739 131 14 44 chr17 18165908 18166041 -71338512 + Tigger1 DNA MER2_type 2283 2418 0 468 314 103 35 chr17 18166044 18166414 -71338139 - LTR16C LTR ERVL -17 474 80 1126 274 112 26 chr17 18166521 18167069 -71337484 + MER115 DNA AcHobo 10 643 -50 1715 120 14 18 chr17 18167470 18167754 -71336799 - L1MA4 LINE L1 0 6300 6018 378 246 112 93 chr17 18168041 18168256 -71336297 - MIR SINE MIR 0 262 44 1898 139 0 14 chr17 18168360 18168675 -71335878 + AluSx SINE Alu 7 317 0 288 307 50 0 chr17 18168769 18168870 -71335683 - L2 LINE L2 -15 3298 3193 312 378 32 0 chr17 18169477 18169633 -71334920 - MIR SINE MIR -74 188 28 24 32 0 0 chr17 18169778 18169809 -71334744 + AT_rich Low_complexity Low_complexity 1 31 0 282 306 32 19 chr17 18170039 18170196 -71334357 + L1M4 LINE L1 3707 3865 -2281 602 89 0 11 chr17 18170292 18170382 -71334171 - L1PA16 LINE L1 -9 6157 6069 630 232 0 43 chr17 18170620 18170758 -71333795 + FLAM_A SINE Alu 1 132 -1 1521 200 31 9 chr17 18170759 18171098 -71333455 - MER93a LTR ERV1 -7 395 4 21 0 0 0 chr17 18171541 18171562 -71332991 + AT_rich Low_complexity Low_complexity 1 21 0 4632 174 44 24 chr17 18171574 18172063 -71332490 + L1MB3 LINE L1 5099 5577 -606 1992 132 0 4 chr17 18172063 18172387 -71332166 + AluSg SINE Alu 1 323 0 4632 174 44 24 chr17 18172387 18172963 -71331590 + L1MB3 LINE L1 5577 6180 -3 28 79 0 0 chr17 18172971 18173034 -71331519 + AT_rich Low_complexity Low_complexity 1 63 0 27 0 0 0 chr17 18173515 18173542 -71331011 + AT_rich Low_complexity Low_complexity 1 27 0 2227 100 7 3 chr17 18173544 18173843 -71330710 - AluSg SINE Alu -10 300 1 2080 141 0 0 chr17 18174407 18174704 -71329849 + AluSq SINE Alu 1 297 -16 2024 123 4 0 chr17 18174720 18174997 -71329556 + AluSp SINE Alu 4 281 -32 240 43 43 21 chr17 18174998 18175045 -71329508 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 1458 162 4 0 chr17 18175079 18175326 -71329227 - L1M2 LINE L1 -498 5793 5546 1055 157 0 0 chr17 18175496 18175678 -71328875 - AluSg/x SINE Alu 0 314 133 1871 159 0 7 chr17 18175803 18176093 -71328460 + AluJb SINE Alu 1 288 -24 2122 120 3 23 chr17 18176933 18177241 -71327312 + AluSq SINE Alu 5 306 -7 505 304 60 16 chr17 18177372 18177719 -71326834 + L1ME3A LINE L1 5421 5784 -389 46 33 0 0 chr17 18177721 18177781 -71326772 + AT_rich Low_complexity Low_complexity 1 60 0 1895 151 0 0 chr17 18177781 18178066 -71326487 - AluSx SINE Alu -25 287 3 1901 127 16 52 chr17 18178068 18178229 -71326324 - AluSx SINE Alu -16 296 150 1871 133 7 7 chr17 18178229 18178507 -71326046 - AluSc SINE Alu -20 289 12 1901 127 16 52 chr17 18178507 18178652 -71325901 - AluSx SINE Alu -162 150 1 254 237 54 21 chr17 18178692 18178785 -71325768 + L1ME3A LINE L1 5852 5947 -223 1578 130 4 29 chr17 18178831 18179077 -71325476 + AluSg/x SINE Alu 65 304 -8 1479 93 6 0 chr17 18179426 18179608 -71324945 + AluSq SINE Alu 1 183 -130 232 206 162 0 chr17 18179609 18179677 -71324876 + AluSq SINE Alu 223 301 -2 788 182 6 3 chr17 18179946 18180110 -71324443 + L1MA9 LINE L1 5803 5969 -331 2166 135 0 3 chr17 18180110 18180421 -71324132 + AluSg SINE Alu 1 310 0 228 338 76 14 chr17 18181067 18181212 -71323341 + MIR SINE MIR 21 174 -88 4895 174 39 10 chr17 18181723 18182659 -71321894 + L1MC2 LINE L1 5361 6323 -21 2019 134 0 0 chr17 18182664 18182977 -71321576 - AluY SINE Alu 0 313 1 978 185 0 0 chr17 18182980 18183137 -71321416 - AluJb SINE Alu -19 293 137 1303 208 44 6 chr17 18183142 18183452 -71321101 + L1MC/D LINE L1 5370 5626 -718 33 25 0 0 chr17 18183452 18183492 -71321061 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr17 18183671 18183694 -71320859 + AT_rich Low_complexity Low_complexity 1 23 0 1125 140 5 50 chr17 18183964 18184164 -71320389 + AluSx SINE Alu 1 191 -121 542 187 24 24 chr17 18184245 18184368 -71320185 - L2 LINE L2 -4 3309 3187 1080 115 0 0 chr17 18184406 18184545 -71320008 + AluSq/x SINE Alu 3 141 -171 2106 107 3 27 chr17 18184545 18184844 -71319709 + AluSx SINE Alu 1 292 -20 843 127 14 28 chr17 18184985 18185127 -71319426 - AluSp/q SINE Alu -2 311 172 2179 136 0 0 chr17 18185165 18185473 -71319080 + AluSg SINE Alu 1 308 -2 529 28 0 0 chr17 18185855 18185927 -71318626 + AluY SINE Alu 240 311 0 2339 221 115 6 chr17 18185955 18186475 -71318078 - MER77 LTR ERV1 -28 577 1 1787 183 3 3 chr17 18186581 18186882 -71317671 - AluJb SINE Alu -11 301 1 482 119 0 0 chr17 18186916 18186983 -71317570 + AluJ/FLAM SINE Alu 2 68 -244 1944 147 7 0 chr17 18186983 18187282 -71317271 + AluSx SINE Alu 1 301 -11 260 243 14 0 chr17 18187283 18187353 -71317200 + (TA)n Simple_repeat Simple_repeat 1 71 0 1544 175 53 23 chr17 18187653 18187956 -71316597 - MER44D DNA MER2_type -1 604 421 359 0 43 0 chr17 18187957 18188003 -71316550 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 6267 16 0 0 chr17 18188004 18188702 -71315851 - L1PA2 LINE L1 0 6155 5458 2657 33 0 3 chr17 18188702 18189033 -71315520 + L1P1 LINE L1 4980 5309 -837 1070 16 0 0 chr17 18189186 18189310 -71315243 + L1P1 LINE L1 5404 5527 -628 894 46 39 0 chr17 18189310 18189440 -71315113 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 1849 171 3 0 chr17 18189462 18189749 -71314804 - AluSx SINE Alu -24 288 1 266 276 57 8 chr17 18189804 18189927 -71314626 + HAL1b LINE L1 1215 1343 -5 1863 151 11 0 chr17 18190070 18190341 -71314212 + AluSx SINE Alu 11 284 -28 1982 126 7 0 chr17 18190430 18190708 -71313845 + AluSx SINE Alu 1 280 -32 198 0 0 0 chr17 18190709 18190731 -71313822 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 285 29 0 0 chr17 18192304 18192338 -71312215 + (TG)n Simple_repeat Simple_repeat 1 34 0 1555 198 3 7 chr17 18192677 18192965 -71311588 - AluJb SINE Alu -21 291 5 583 155 0 3 chr17 18193095 18193333 -71311220 + AluSx SINE Alu 1 312 0 1528 174 47 19 chr17 18193427 18193749 -71310804 - L1MB8 LINE L1 0 6178 5848 839 260 48 70 chr17 18194184 18194666 -71309887 - PABL_B LTR ERV1 -42 625 1 2057 145 3 0 chr17 18194915 18195225 -71309328 - AluSq SINE Alu -2 311 1 2146 110 3 0 chr17 18195227 18195517 -71309036 - AluSx SINE Alu -21 291 1 1101 144 0 6 chr17 18195525 18195699 -71308854 - AluSq SINE Alu -10 303 131 23 0 0 0 chr17 18195701 18195724 -71308829 + AT_rich Low_complexity Low_complexity 1 23 0 587 98 0 0 chr17 18195974 18196056 -71308497 + AluY SINE Alu 217 298 -13 21 0 0 0 chr17 18196149 18196170 -71308383 + AT_rich Low_complexity Low_complexity 1 21 0 2073 122 3 13 chr17 18196342 18196645 -71307908 + AluSx SINE Alu 1 300 -12 2174 142 7 0 chr17 18196937 18197247 -71307306 + AluSx SINE Alu 1 312 0 1864 169 3 22 chr17 18198073 18198386 -71306167 - AluJb SINE Alu -5 307 1 2190 109 3 14 chr17 18198454 18198768 -71305785 + AluSp SINE Alu 1 311 0 2023 157 0 25 chr17 18198843 18199162 -71305391 + AluJo SINE Alu 1 311 -1 2217 119 0 0 chr17 18199162 18199457 -71305096 + AluSc SINE Alu 1 295 -14 1581 154 30 4 chr17 18199457 18199724 -71304829 - MER54A LTR ERVL -627 274 1 1468 153 141 0 chr17 18199901 18200163 -71304390 - AluSx SINE Alu -3 299 1 2288 114 3 0 chr17 18200762 18201060 -71303493 - AluSp SINE Alu -14 299 1 330 243 0 0 chr17 18201196 18201266 -71303287 + AluS SINE Alu 226 295 -6 1021 156 0 54 chr17 18201268 18201283 -71303270 + AluSg/x SINE Alu 118 132 -178 2322 104 3 0 chr17 18201283 18201592 -71302961 + AluSq SINE Alu 2 311 -2 1021 156 0 54 chr17 18201592 18201762 -71302791 + AluSg/x SINE Alu 132 293 -17 705 188 0 0 chr17 18201971 18202088 -71302465 + FLAM_C SINE Alu 1 117 -16 267 54 0 0 chr17 18202091 18202128 -71302425 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 443 147 0 0 chr17 18202154 18202222 -71302331 + AluJ/FRAM SINE Alu 225 292 -20 288 102 0 0 chr17 18202471 18202520 -71302033 + (T)n Simple_repeat Simple_repeat 1 49 0 504 16 0 0 chr17 18202521 18202584 -71301969 - L1PA2 LINE L1 -1 6154 6092 1240 217 4 0 chr17 18202786 18203030 -71301523 + AluJb SINE Alu 1 245 -67 1795 124 0 8 chr17 18203030 18203279 -71301274 + AluSx SINE Alu 34 280 -32 777 76 0 0 chr17 18203279 18203384 -71301169 + (GAAA)n Simple_repeat Simple_repeat 3 107 0 1245 222 20 20 chr17 18203393 18203699 -71300854 + AluJo SINE Alu 6 311 -1 3856 169 72 37 chr17 18203753 18204484 -71300069 - MER21B LTR ERV1 0 863 98 2163 108 16 32 chr17 18204484 18204799 -71299754 + AluSx SINE Alu 3 312 0 3856 169 72 37 chr17 18204799 18204901 -71299652 - MER21B LTR ERV1 -765 98 1 1467 172 22 52 chr17 18205202 18205670 -71298883 - LTR25 LTR ERV1 -47 747 362 803 141 263 29 chr17 18205670 18205982 -71298571 + LTR46 LTR ERV1 1 460 0 627 198 26 0 chr17 18205982 18206086 -71298467 - LTR25 LTR ERV1 -438 356 250 459 136 30 121 chr17 18206080 18206212 -71298341 - MER61E LTR ERV1 -417 152 33 * 1390 113 0 0 chr17 18206850 18207035 -71297518 + AluSg/x SINE Alu 114 298 -14 394 269 132 53 chr17 18207036 18207393 -71297160 - L2 LINE L2 -82 3231 2847 274 158 0 0 chr17 18207445 18207483 -71297070 - Alu SINE Alu -262 38 1 2447 93 3 0 chr17 18207848 18208158 -71296395 - AluSx SINE Alu -1 311 1 1693 168 14 0 chr17 18208207 18208499 -71296054 - AluSx SINE Alu -16 296 1 1973 135 10 13 chr17 18208709 18209021 -71295532 + AluSx SINE Alu 1 311 -1 1089 179 168 19 chr17 18209050 18209318 -71295235 - MER106B DNA MER1_type -535 524 217 1929 145 7 7 chr17 18209322 18209618 -71294935 - AluSx SINE Alu -16 296 1 544 153 0 0 chr17 18209629 18209714 -71294839 - AluJ/FLAM SINE Alu -226 86 2 699 232 9 73 chr17 18209714 18209934 -71294619 + L1MC4a LINE L1 6687 6892 -916 2013 116 9 44 chr17 18209936 18210254 -71294299 - AluSq SINE Alu -6 307 1 1329 113 4 74 chr17 18210604 18210833 -71293720 - AluSp SINE Alu -3 310 98 1915 147 0 7 chr17 18210833 18211118 -71293435 - AluSg SINE Alu -16 294 12 2023 136 0 7 chr17 18211137 18211424 -71293129 - AluSg SINE Alu -24 286 2 258 224 0 40 chr17 18211477 18211553 -71293000 - MER89 LTR ERV1 0 559 487 2232 225 9 18 chr17 18211568 18211694 -71292859 - L1P LINE L1 -858 5288 5162 1749 128 11 8 chr17 18211694 18211959 -71292594 - AluSg SINE Alu -3 307 42 2232 225 9 18 chr17 18211959 18212396 -71292157 - L1P LINE L1 -984 5162 4730 2345 158 19 9 chr17 18212405 18212824 -71291729 + L1PA16 LINE L1 5744 6166 0 2109 129 3 0 chr17 18212896 18213205 -71291348 + AluSg SINE Alu 1 310 0 2112 104 0 3 chr17 18213339 18213637 -71290916 + AluY SINE Alu 1 297 -14 2634 200 105 4 chr17 18213900 18214424 -71290129 - MER77 LTR ERV1 -28 577 1 232 277 24 0 chr17 18214426 18214509 -71290044 + L1ME LINE L1 5492 5576 -545 1499 201 7 0 chr17 18214549 18214838 -71289715 - AluJb SINE Alu -21 291 1 221 229 57 19 chr17 18214838 18214871 -71289682 + (TATATG)n Simple_repeat Simple_repeat 6 36 -78 1734 168 7 0 chr17 18214871 18215169 -71289384 + AluSq SINE Alu 1 300 -13 221 229 57 19 chr17 18215169 18215240 -71289313 + (TATATG)n Simple_repeat Simple_repeat 36 114 0 1539 201 17 3 chr17 18215534 18215833 -71288720 - MER44D DNA MER2_type -1 604 430 1604 200 0 0 chr17 18215836 18216230 -71288323 - AluSx SINE Alu 0 394 1 296 274 48 8 chr17 18216283 18216407 -71288146 + HAL1b LINE L1 1215 1343 -5 1995 143 0 0 chr17 18216535 18216835 -71287718 + AluSx SINE Alu 1 300 -12 1904 127 7 7 chr17 18216964 18217256 -71287297 + AluSx SINE Alu 2 293 -19 285 29 0 0 chr17 18218859 18218893 -71285660 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr17 18219209 18219237 -71285316 + AT_rich Low_complexity Low_complexity 1 28 0 1265 187 4 30 chr17 18219237 18219499 -71285054 - AluJb SINE Alu -57 255 1 469 138 4 17 chr17 18219626 18219880 -71284673 + AluSx SINE Alu 1 312 0 1344 181 72 10 chr17 18219939 18220243 -71284310 - L1MB8 LINE L1 0 6178 5856 1556 129 6 129 chr17 18220343 18220669 -71283884 - AluSx SINE Alu -16 286 1 798 141 15 30 chr17 18220671 18220806 -71283747 - AluJo/FLAM SINE Alu -169 133 1 325 250 0 34 chr17 18220806 18220894 -71283659 - MER33 DNA MER1_type -201 123 39 1804 153 11 0 chr17 18221237 18221519 -71283034 - AluSx SINE Alu -17 295 11 2004 106 11 3 chr17 18221638 18222012 -71282541 - AluSq SINE Alu 0 376 1 868 150 7 0 chr17 18222015 18222155 -71282398 - AluYa5 SINE Alu -170 141 1 220 133 22 22 chr17 18223137 18223182 -71281371 + GA-rich Low_complexity Low_complexity 2 46 0 1225 180 131 14 chr17 18223226 18223509 -71281044 - SST1 Satellite centromeric -10 1553 1238 844 158 0 13 chr17 18223515 18223667 -71280886 + AluSg/x SINE Alu 157 306 -6 7611 140 34 27 chr17 18223740 18225136 -71279417 - SST1 Satellite centromeric -157 1406 1 1454 312 48 39 chr17 18225687 18226514 -71278039 - SST1 Satellite centromeric -312 1251 417 492 320 59 0 chr17 18226529 18226748 -71277805 - SST1 Satellite centromeric -1331 232 1 203 265 0 24 chr17 18227451 18227534 -71277019 + (CAGAGA)n Simple_repeat Simple_repeat 2 82 0 * 249 210 16 0 chr17 18227486 18227548 -71277005 + GA-rich Low_complexity Low_complexity 1 63 0 261 0 0 0 chr17 18227548 18227577 -71276976 + (CA)n Simple_repeat Simple_repeat 2 30 0 2526 259 56 42 chr17 18227581 18228954 -71275599 - SST1 Satellite centromeric -1315 1392 1 201 154 0 0 chr17 18229646 18229685 -71274868 + (CA)n Simple_repeat Simple_repeat 2 40 0 219 170 21 0 chr17 18229689 18229736 -71274817 + GA-rich Low_complexity Low_complexity 1 48 0 294 29 0 0 chr17 18229741 18229776 -71274777 + (CA)n Simple_repeat Simple_repeat 2 36 0 1011 243 62 55 chr17 18229813 18230376 -71274177 - SST1 Satellite centromeric -21 1542 976 291 319 97 21 chr17 18230972 18231116 -71273437 + MIR SINE MIR 58 212 -50 369 0 0 0 chr17 18232353 18232394 -71272159 + (TC)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr17 18232658 18232693 -71271860 + AT_rich Low_complexity Low_complexity 1 35 0 671 296 63 35 chr17 18232968 18233286 -71271267 + L1M4 LINE L1 2841 3167 -2979 470 127 13 0 chr17 18233536 18233615 -71270938 - MADE1 DNA Mariner 0 80 1 220 309 82 36 chr17 18233737 18233847 -71270706 - L2 LINE L2 -959 2355 2241 267 324 52 29 chr17 18234816 18234952 -71269601 - L2 LINE L2 0 3272 3134 21 36 0 0 chr17 18235949 18235977 -71268576 + AT_rich Low_complexity Low_complexity 1 28 0 211 269 103 0 chr17 18236202 18236280 -71268273 - L2 LINE L2 -5 3308 3223 21 36 0 0 chr17 18237489 18237517 -71267036 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr17 18237753 18237778 -71266775 + AT_rich Low_complexity Low_complexity 1 25 0 21 82 0 0 chr17 18237963 18238012 -71266541 + AT_rich Low_complexity Low_complexity 1 49 0 1746 143 57 0 chr17 18238326 18238605 -71265948 - AluSq SINE Alu -18 295 1 2173 88 7 3 chr17 18238828 18239135 -71265418 - AluY SINE Alu -3 308 1 2045 133 0 0 chr17 18239302 18239596 -71264957 + AluSx SINE Alu 1 294 -18 3280 164 43 31 chr17 18240122 18240500 -71264053 - L1MA5 LINE L1 -2 6298 5907 2276 77 0 10 chr17 18240500 18240812 -71263741 - AluY SINE Alu -2 309 1 3280 164 43 31 chr17 18240812 18241081 -71263472 - L1MA5 LINE L1 -393 5907 5643 2822 221 30 1 chr17 18241084 18241778 -71262775 + L1MA8 LINE L1 3884 4597 -1549 1703 169 18 32 chr17 18241922 18242260 -71262293 - MER52A LTR ERV1 -1373 382 50 243 240 72 48 chr17 18242496 18242621 -71261932 - MER52A LTR ERV1 -1627 128 1 29 0 0 0 chr17 18243210 18243239 -71261314 + AT_rich Low_complexity Low_complexity 1 29 0 1686 203 0 0 chr17 18243626 18243937 -71260616 + AluSx SINE Alu 1 311 -1 434 238 40 7 chr17 18244792 18244943 -71259610 - L1MA8 LINE L1 -4 6287 6132 * 4252 158 44 45 chr17 18244926 18245225 -71259328 + L1MA8 LINE L1 5254 5552 -739 483 127 13 0 chr17 18245225 18245304 -71259249 + MADE1 DNA Mariner 1 80 0 4252 158 44 45 chr17 18245304 18245935 -71258618 + L1MA8 LINE L1 5552 6183 -108 30 72 0 12 chr17 18246331 18246366 -71258187 + AT_rich Low_complexity Low_complexity 1 35 -47 1798 138 4 0 chr17 18246366 18246642 -71257911 - AluSq SINE Alu -35 278 2 30 72 0 12 chr17 18246642 18246689 -71257864 + AT_rich Low_complexity Low_complexity 35 82 0 191 344 33 27 chr17 18247555 18247692 -71256861 - MIR SINE MIR -42 166 28 524 176 92 11 chr17 18247901 18248082 -71256471 + L1MA8 LINE L1 6104 6291 0 2133 69 24 3 chr17 18248967 18249256 -71255297 - AluY SINE Alu -16 295 1 323 345 115 20 chr17 18251540 18251792 -71252761 - L2 LINE L2 -39 3274 2999 496 275 7 27 chr17 18251830 18251979 -71252574 - L2 LINE L2 -939 2375 2230 581 311 32 32 chr17 18251979 18252230 -71252323 - L2 LINE L2 -2114 1200 950 1742 176 10 0 chr17 18252486 18252782 -71251771 + AluJo SINE Alu 1 299 -13 352 187 8 41 chr17 18252794 18252917 -71251636 + GA-rich Low_complexity Low_complexity 1 119 0 213 231 0 15 chr17 18252923 18252988 -71251565 + A-rich Low_complexity Low_complexity 4 67 0 889 184 0 80 chr17 18253327 18253539 -71251014 + AluJb SINE Alu 90 284 -28 508 296 100 37 chr17 18253553 18253932 -71250621 + L1 LINE L1 2204 2606 -3540 329 309 57 0 chr17 18254045 18254168 -71250385 + L1 LINE L1 2644 2773 -3373 191 86 0 29 chr17 18254454 18254489 -71250064 + (CATAT)n Simple_repeat Simple_repeat 3 36 0 183 376 172 0 chr17 18254511 18254604 -71249949 + L2 LINE L2 3125 3233 -39 258 256 35 23 chr17 18255984 18256070 -71248483 + MIR SINE MIR 41 127 -81 276 290 129 11 chr17 18256154 18256247 -71248306 + L2 LINE L2 3147 3250 -22 200 278 48 24 chr17 18257594 18257696 -71246857 - MIR SINE MIR -77 131 56 189 324 235 12 chr17 18258412 18258582 -71245971 - MIR SINE MIR -34 228 21 184 122 146 24 chr17 18258664 18258705 -71245848 + L2 LINE L2 3221 3266 -6 216 167 0 0 chr17 18259566 18259614 -71244939 + (CA)n Simple_repeat Simple_repeat 1 48 0 238 258 25 58 chr17 18260190 18260310 -71244243 - SST1 Satellite centromeric -606 957 842 243 314 58 45 chr17 18260509 18261048 -71243505 - SST1 Satellite centromeric -952 611 66 261 0 0 0 chr17 18261813 18261842 -71242711 + (T)n Simple_repeat Simple_repeat 1 29 0 207 184 0 0 chr17 18262037 18262075 -71242478 + (CA)n Simple_repeat Simple_repeat 2 39 0 397 289 56 56 chr17 18262986 18263557 -71240996 - SST1 Satellite centromeric -962 601 31 397 152 0 0 chr17 18263572 18263651 -71240902 + ALR/Alpha Satellite centromeric 9 87 -85 897 200 8 2 chr17 18263737 18265873 -71238680 + ALR/Alpha Satellite centromeric 1 2149 -1 891 211 14 5 chr17 18265888 18266740 -71237813 + ALR/Alpha Satellite centromeric 1 860 -8 969 200 10 3 chr17 18266754 18276417 -71228136 + ALR/Alpha Satellite centromeric 1 9727 0 994 196 8 4 chr17 18276432 18277537 -71227016 + ALR/Alpha Satellite centromeric 1 1101 -11460 2182 112 0 10 chr17 18277537 18277872 -71226681 + AluY SINE Alu 1 332 0 994 196 8 4 chr17 18277872 18282455 -71222098 + ALR/Alpha Satellite centromeric 1101 5667 -6894 1896 149 7 17 chr17 18282455 18282751 -71221802 + AluSx SINE Alu 1 293 -19 994 196 8 4 chr17 18282751 18288900 -71215653 + ALR/Alpha Satellite centromeric 5667 12511 -50 3943 107 47 2 chr17 18288918 18289497 -71215056 - LTR14B LTR ERVK 0 608 4 873 213 0 0 chr17 18289504 18289903 -71214650 + ALR/Alpha Satellite centromeric 1 399 -1 1025 193 5 5 chr17 18289920 18294372 -71210181 + ALR/Alpha Satellite centromeric 1 4451 -29 2056 106 3 14 chr17 18294376 18294658 -71209895 + AluY SINE Alu 6 284 -27 931 192 4 2 chr17 18294799 18297768 -71206785 + ALR/Alpha Satellite centromeric 1 2976 -9 763 152 30 23 chr17 18297869 18298001 -71206552 - FLAM_C SINE Alu 0 133 1 506 86 0 0 chr17 18298006 18298076 -71206477 - Alu SINE Alu -12 300 231 547 284 21 103 chr17 18298155 18298479 -71206074 - L1MEd LINE L1 -4902 1217 868 2218 75 0 14 chr17 18298479 18298759 -71205794 - AluY SINE Alu 0 311 36 2836 202 78 100 chr17 18298759 18299749 -71204804 - LTR5 LTR ERVK 0 969 1 2214 111 7 0 chr17 18299802 18300099 -71204454 - AluSp SINE Alu -13 300 2 2427 93 0 0 chr17 18300112 18300422 -71204131 - AluSx SINE Alu -2 310 1 3095 125 4 47 chr17 18301671 18301945 -71202608 - MER4B LTR ERV1 -30 749 465 2044 124 3 0 chr17 18301945 18302243 -71202310 + AluSx SINE Alu 6 304 -8 3095 125 4 47 chr17 18302243 18302575 -71201978 - MER4B LTR ERV1 -314 465 1 247 167 17 17 chr17 18302922 18302982 -71201571 - FLAM SINE Alu 0 133 74 1938 138 0 0 chr17 18303703 18304016 -71200537 - AluSx SINE Alu 0 313 1 863 269 29 66 chr17 18304019 18304154 -71200399 - L1MC/D LINE L1 -2079 5729 5590 1879 110 28 48 chr17 18304154 18304468 -71200085 - AluSx SINE Alu 0 308 1 863 269 29 66 chr17 18304468 18304708 -71199845 - L1MC/D LINE L1 -2218 5590 5370 2295 70 0 27 chr17 18304708 18305009 -71199544 + AluY SINE Alu 1 293 -18 863 269 29 66 chr17 18305009 18305085 -71199468 - L1MC/D LINE L1 -2438 5370 5293 1580 210 17 3 chr17 18305135 18305435 -71199118 + AluJo SINE Alu 5 308 -4 1188 123 0 6 chr17 18305447 18305609 -71198944 + AluSx SINE Alu 1 161 -151 1562 183 3 34 chr17 18305656 18305951 -71198602 + AluJo SINE Alu 1 286 -26 408 20 0 0 chr17 18305952 18306001 -71198552 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 269 131 34 chr17 18306043 18306218 -71198335 + L1ME4a LINE L1 5743 5934 -187 2088 104 0 63 chr17 18306311 18306482 -71198071 - AluSq SINE Alu -14 299 156 2235 100 3 10 chr17 18306482 18306782 -71197771 - AluSp SINE Alu -15 298 1 2088 104 0 63 chr17 18306782 18306928 -71197625 - AluSq SINE Alu -157 156 2 2171 117 0 16 chr17 18307108 18307417 -71197136 - AluSg SINE Alu -6 304 1 189 0 0 0 chr17 18308497 18308518 -71196035 + (ATG)n Simple_repeat Simple_repeat 2 22 0 1157 133 12 0 chr17 18308518 18308691 -71195862 - AluJb SINE Alu -29 283 109 2061 116 60 0 chr17 18308755 18309039 -71195514 + AluSx SINE Alu 1 301 -11 931 286 46 40 chr17 18309122 18309371 -71195182 + L1MC4a LINE L1 5317 5563 -2245 2196 106 25 43 chr17 18309371 18309719 -71194834 - L1MB3 LINE L1 -7 6176 5823 1648 97 5 0 chr17 18309719 18309935 -71194618 - AluSq SINE Alu -16 297 81 2252 112 0 13 chr17 18309935 18310239 -71194314 - AluSx SINE Alu -11 301 2 2243 87 0 13 chr17 18310243 18310542 -71194011 - AluSc SINE Alu -14 295 1 2196 106 25 43 chr17 18310542 18310585 -71193968 - L1MB3 LINE L1 -362 5821 5786 931 286 46 40 chr17 18310585 18310878 -71193675 + L1MC4a LINE L1 5563 5862 -1946 2214 87 10 10 chr17 18311457 18311755 -71192798 - AluSq SINE Alu -15 298 1 334 123 0 62 chr17 18311772 18311853 -71192700 - AluJ/FRAM SINE Alu 0 302 227 1239 134 13 31 chr17 18312132 18312315 -71192238 - AluJo SINE Alu -8 304 124 303 85 0 0 chr17 18312315 18312362 -71192191 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1239 134 13 31 chr17 18312362 18312402 -71192151 - AluJo SINE Alu -188 124 85 416 39 0 0 chr17 18312402 18312453 -71192100 - AluSg/x SINE Alu -62 250 200 858 117 8 8 chr17 18312458 18312586 -71191967 - FLAM_C SINE Alu -13 130 3 2334 76 0 7 chr17 18312627 18312928 -71191625 + AluY SINE Alu 1 299 -12 2001 100 62 3 chr17 18312928 18313218 -71191335 + AluSx SINE Alu 1 307 -5 978 166 0 0 chr17 18313225 18313382 -71191171 + FRAM SINE Alu 1 152 -24 2033 101 59 7 chr17 18313519 18313806 -71190747 - AluSg SINE Alu -8 302 1 1541 181 46 3 chr17 18313884 18314166 -71190387 + AluSx SINE Alu 1 294 -18 1629 132 77 18 chr17 18314175 18314292 -71190261 + AluSx SINE Alu 1 110 -202 2148 133 3 3 chr17 18314292 18314593 -71189960 + AluSx SINE Alu 1 301 -11 1629 132 77 18 chr17 18314593 18314748 -71189805 + AluSx SINE Alu 110 289 -23 544 152 0 0 chr17 18314749 18314828 -71189725 + AluSg/x SINE Alu 210 288 -22 1099 97 0 7 chr17 18314865 18315010 -71189543 + AluSg SINE Alu 1 144 -166 2042 134 14 0 chr17 18315011 18315303 -71189250 + AluSx SINE Alu 2 297 -15 685 177 15 15 chr17 18315396 18315526 -71189027 + AluJo/FLAM SINE Alu 3 132 -170 1447 114 0 68 chr17 18315528 18315748 -71188805 + AluSx SINE Alu 1 205 -107 456 270 28 24 chr17 18315748 18315959 -71188594 - LTR4 LTR ERV1 0 596 385 496 185 0 0 chr17 18316362 18316443 -71188110 + AluSx SINE Alu 199 279 -30 1845 139 49 0 chr17 18316488 18316799 -71187754 - AluSx SINE Alu 0 312 1 1496 117 5 0 chr17 18317002 18317199 -71187354 + AluSc SINE Alu 1 198 -111 362 224 14 6 chr17 18317326 18317484 -71187069 + MIR SINE MIR 18 261 -1 472 156 0 0 chr17 18317516 18317593 -71186960 + AluSg/x SINE Alu 190 266 -44 1895 174 0 0 chr17 18317607 18317888 -71186665 + AluSx SINE Alu 2 282 -30 2204 113 3 7 chr17 18317907 18318208 -71186345 + AluSp SINE Alu 1 300 -13 392 198 0 12 chr17 18318232 18318318 -71186235 + MER103 DNA DNA 21 105 -61 2401 98 3 0 chr17 18318583 18318889 -71185664 + AluSq SINE Alu 1 307 -6 2248 113 0 0 chr17 18318899 18319199 -71185354 + AluSq SINE Alu 1 300 -13 1071 111 0 0 chr17 18319223 18319367 -71185186 + AluSg/x SINE Alu 163 306 -4 576 184 37 9 chr17 18320022 18320131 -71184422 - AluJ SINE Alu -16 296 185 840 156 0 16 chr17 18320139 18320267 -71184286 - AluJ SINE Alu -186 126 1 785 191 26 42 chr17 18320337 18320526 -71184027 - AluJo SINE Alu -7 305 120 426 201 129 14 chr17 18320556 18320695 -71183858 - MIR SINE MIR -96 166 12 1358 108 0 5 chr17 18320766 18320952 -71183601 - AluSg/x SINE Alu -5 305 121 2109 123 3 0 chr17 18321157 18321442 -71183111 + AluSx SINE Alu 1 286 -26 1077 187 57 5 chr17 18321755 18321964 -71182589 - AluJo SINE Alu -92 220 1 964 161 161 3 chr17 18321964 18322356 -71182197 - MER21B LTR ERV1 -371 492 20 1985 123 30 7 chr17 18322931 18323232 -71181321 + AluSx SINE Alu 1 308 -4 374 241 58 0 chr17 18323628 18323715 -71180838 + FRAM SINE Alu 60 151 -15 1761 116 21 0 chr17 18323730 18323971 -71180582 - AluSc SINE Alu -25 284 39 1878 90 11 19 chr17 18326563 18326829 -71177724 - AluSp SINE Alu -17 296 33 1959 96 32 7 chr17 18326936 18327217 -71177336 + AluSq SINE Alu 2 289 -24 763 182 52 13 chr17 18327313 18327467 -71177086 + FRAM SINE Alu 1 159 -17 2238 125 0 0 chr17 18327914 18328225 -71176328 + AluSx SINE Alu 1 311 -1 716 158 7 43 chr17 18328237 18328376 -71176177 + AluJo SINE Alu 1 134 -178 32 0 0 0 chr17 18328520 18328552 -71176001 + AT_rich Low_complexity Low_complexity 1 32 0 1256 154 0 22 chr17 18328559 18328646 -71175907 + AluJb SINE Alu 1 88 -224 2001 130 7 7 chr17 18328646 18328984 -71175569 + AluSx SINE Alu 1 338 0 1256 154 0 22 chr17 18328984 18329141 -71175412 + AluJb SINE Alu 88 291 -21 1161 187 91 9 chr17 18329157 18329376 -71175177 - AluJo SINE Alu -73 239 3 421 265 103 20 chr17 18329376 18329636 -71174917 - L1MC4a LINE L1 -341 5780 5598 2164 85 10 17 chr17 18329636 18329931 -71174622 - AluSq SINE Alu -20 293 1 421 265 103 20 chr17 18329931 18329959 -71174594 - L1MC4a LINE L1 -523 5598 5574 2236 99 6 6 chr17 18330013 18330325 -71174228 - AluSx SINE Alu 0 312 1 678 188 7 22 chr17 18330361 18330499 -71174054 + AluJo SINE Alu 3 138 -174 2161 111 7 3 chr17 18330506 18330804 -71173749 + AluY SINE Alu 1 299 -12 2228 98 3 0 chr17 18330815 18331101 -71173452 + AluSp SINE Alu 7 293 -20 22 0 0 0 chr17 18331101 18331123 -71173430 + AT_rich Low_complexity Low_complexity 1 22 0 981 160 30 0 chr17 18331123 18331292 -71173261 + AluJo SINE Alu 123 296 -16 1983 134 0 4 chr17 18331355 18331668 -71172885 - AluSg SINE Alu 0 316 5 1946 203 10 0 chr17 18331703 18332108 -71172445 + L1PA15-16 LINE L1 2278 2686 -4163 781 274 30 6 chr17 18332114 18332446 -71172107 + L1PA15-16 LINE L1 3476 3815 -3034 * 4491 227 26 8 chr17 18332424 18333571 -71170982 + L1PA15-16 LINE L1 4465 5632 -1217 472 356 91 9 chr17 18333742 18333961 -71170592 + HAL1 LINE L1 119 355 -2152 360 279 97 47 chr17 18334184 18334586 -71169967 + HAL1 LINE L1 700 1121 -1386 180 188 25 12 chr17 18334654 18334734 -71169819 + (TA)n Simple_repeat Simple_repeat 1 81 0 420 240 62 122 chr17 18334743 18335047 -71169506 - MER93a LTR ERV1 0 402 117 282 235 43 0 chr17 18335193 18335308 -71169245 + (CATATA)n Simple_repeat Simple_repeat 5 124 0 242 193 42 60 chr17 18335312 18335478 -71169075 + (TATAA)n Simple_repeat Simple_repeat 5 167 0 858 277 75 12 chr17 18335531 18335960 -71168593 + HAL1 LINE L1 1323 1778 -729 368 228 35 18 chr17 18335990 18336104 -71168449 + LTR16A LTR ERVL 20 135 -315 1362 203 19 0 chr17 18336340 18336651 -71167902 - L1MA4 LINE L1 -81 6219 5903 21 0 0 0 chr17 18336657 18336678 -71167875 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr17 18337578 18337610 -71166943 + (TG)n Simple_repeat Simple_repeat 2 33 0 28 29 0 0 chr17 18338752 18338787 -71165766 + AT_rich Low_complexity Low_complexity 1 35 0 1214 177 23 0 chr17 18339207 18339472 -71165081 + L1MA6 LINE L1 6030 6300 0 23 33 0 0 chr17 18340113 18340143 -71164410 + AT_rich Low_complexity Low_complexity 1 30 0 1445 259 41 43 chr17 18340653 18341286 -71163267 - L1ME1 LINE L1 -116 6050 5419 3968 178 19 41 chr17 18341286 18342167 -71162386 + L1MA3 LINE L1 5443 6304 -1 30 59 0 0 chr17 18342197 18342248 -71162305 + AT_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr17 18342527 18342565 -71161988 + AT_rich Low_complexity Low_complexity 1 38 0 1307 153 4 0 chr17 18342965 18343193 -71161360 + L1MA3 LINE L1 6077 6305 0 1949 128 7 30 chr17 18343282 18343579 -71160974 + AluSc SINE Alu 1 290 -19 22 35 0 0 chr17 18343948 18343977 -71160576 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr17 18345218 18345254 -71159299 + AT_rich Low_complexity Low_complexity 1 36 0 1227 92 82 0 chr17 18345906 18346090 -71158463 - THE1B LTR MaLR -165 199 1 11494 101 4 5 chr17 18346091 18347672 -71156881 - THE1B-int LTR MaLR -1 1579 1 1927 122 49 35 chr17 18347681 18348025 -71156528 - THE1B LTR MaLR -15 349 1 210 37 0 0 chr17 18348077 18348104 -71156449 + (TG)n Simple_repeat Simple_repeat 1 27 0 2348 90 0 10 chr17 18348332 18348633 -71155920 - AluSp SINE Alu -15 298 1 225 169 85 0 chr17 18349237 18349296 -71155257 + LTR66 LTR ERVL 376 439 -171 33 56 0 0 chr17 18349503 18349557 -71154996 + AT_rich Low_complexity Low_complexity 1 54 0 1838 184 0 0 chr17 18350514 18350813 -71153740 + AluSx SINE Alu 1 299 -13 191 296 93 0 chr17 18351337 18351391 -71153162 + L3b LINE CR1 1278 1336 -247 1053 128 26 0 chr17 18352843 18352999 -71151554 + AluSp SINE Alu 135 294 -19 2413 55 3 0 chr17 18353010 18353303 -71151250 + AluY SINE Alu 1 294 -17 1614 145 65 11 chr17 18353526 18353802 -71150751 + AluSx SINE Alu 14 304 -8 48 67 0 0 chr17 18354052 18354142 -71150411 + AT_rich Low_complexity Low_complexity 1 90 0 1496 248 69 17 chr17 18354941 18355421 -71149132 + MLT1D LTR MaLR 1 505 0 305 278 165 42 chr17 18355434 18355937 -71148616 - L1ME3A LINE L1 -241 5929 5362 1279 206 4 7 chr17 18555981 18556253 -70948300 - MLT1A1 LTR MaLR -94 271 1 1211 217 145 69 chr17 18556258 18556667 -70947886 - L1M4 LINE L1 -3013 3133 2656 2170 55 98 0 chr17 18556667 18556942 -70947611 + AluY SINE Alu 1 302 -9 1211 217 145 69 chr17 18556942 18557172 -70947381 - L1M4 LINE L1 -3490 2656 2445 288 0 0 0 chr17 18557199 18557231 -70947322 + (T)n Simple_repeat Simple_repeat 1 32 0 567 208 0 15 chr17 18557231 18557361 -70947192 - AluY SINE Alu -179 132 5 252 0 0 0 chr17 18557417 18557445 -70947108 + (T)n Simple_repeat Simple_repeat 1 28 0 535 233 35 47 chr17 18557677 18557849 -70946704 - L2 LINE L2 -1304 2010 1841 951 101 0 0 chr17 18557895 18558024 -70946529 - AluSg/x SINE Alu 0 310 182 1073 157 164 0 chr17 18558032 18558325 -70946228 + L1MA8 LINE L1 5947 6287 -4 2046 112 3 30 chr17 18559379 18559683 -70944870 + AluSg SINE Alu 1 296 -14 1691 190 10 0 chr17 18559688 18559983 -70944570 + AluJb SINE Alu 1 298 -14 207 0 0 0 chr17 18560038 18560061 -70944492 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1450 174 55 4 chr17 18560061 18560309 -70944244 - AluSx SINE Alu -28 284 24 405 211 0 98 chr17 18560316 18560373 -70944180 - L1M4 LINE L1 -1973 4173 4133 2030 102 7 17 chr17 18560373 18560666 -70943887 - AluSx SINE Alu 0 312 23 405 211 0 98 chr17 18560666 18560731 -70943822 - L1M4 LINE L1 -2013 4133 4063 2009 139 0 31 chr17 18560764 18561087 -70943466 - AluSq SINE Alu 0 313 1 560 89 0 11 chr17 18561088 18561178 -70943375 - Alu SINE Alu 0 312 224 879 139 0 8 chr17 18561529 18561658 -70942895 + AluJo/FLAM SINE Alu 1 128 -184 467 154 64 0 chr17 18561661 18561739 -70942814 - AluSg/x SINE Alu -20 290 208 435 19 0 0 chr17 18561742 18561794 -70942759 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 71 0 0 chr17 18563066 18563108 -70941445 + AT_rich Low_complexity Low_complexity 1 42 0 2326 110 0 3 chr17 18563486 18563796 -70940757 - AluSc SINE Alu 0 309 1 1355 145 16 21 chr17 18563811 18564053 -70940500 + LOR1b LTR ERV1 221 461 0 344 132 29 0 chr17 18564135 18564203 -70940350 + CT-rich Low_complexity Low_complexity 1 70 0 2305 97 7 0 chr17 18564203 18564502 -70940051 - AluSx SINE Alu -11 301 1 330 296 115 115 chr17 18564601 18565305 -70939248 - L1M2 LINE L1 -5630 1219 516 881 80 0 0 chr17 18566076 18566189 -70938364 + AluSg SINE Alu 1 113 -197 2151 74 0 14 chr17 18566488 18566804 -70937749 + AluY SINE Alu 1 312 0 536 146 0 64 chr17 18566805 18566915 -70937638 + U6 snRNA snRNA 4 106 -1 229 327 83 39 chr17 18567577 18567733 -70936820 - MIR SINE MIR -41 221 59 2420 47 10 0 chr17 18568327 18568624 -70935929 - AluY SINE Alu -11 300 1 21 0 0 0 chr17 18568713 18568734 -70935819 + AT_rich Low_complexity Low_complexity 1 21 0 2216 165 21 28 chr17 18568764 18569200 -70935353 - Tigger2a DNA MER2_type 0 434 2 1646 176 33 10 chr17 18569309 18569610 -70934943 + AluJo SINE Alu 1 308 -4 1802 160 3 39 chr17 18570316 18570628 -70933925 + AluJo SINE Alu 1 301 -11 2043 128 3 0 chr17 18571034 18571323 -70933230 - AluSx SINE Alu -22 290 1 2224 112 3 19 chr17 18571359 18571673 -70932880 + AluSc SINE Alu 1 309 0 254 261 0 0 chr17 18571720 18571785 -70932768 - MLT1L LTR MaLR -5 610 546 555 308 125 9 chr17 18571856 18572184 -70932369 - MLT1L LTR MaLR -245 370 5 610 264 155 0 chr17 18572257 18572450 -70932103 - MER58A DNA MER1_type 0 224 2 305 317 131 57 chr17 18572820 18573362 -70931191 - L2 LINE L2 -787 2527 1946 2382 61 0 13 chr17 18574374 18574684 -70929869 - AluY SINE Alu -5 306 1 536 259 9 0 chr17 18574700 18574808 -70929745 - FAM SINE Alu -76 109 1 2686 172 17 50 chr17 18575169 18575750 -70928803 - MER68 LTR ERV1 0 562 1 23 0 0 0 chr17 18575785 18575808 -70928745 + AT_rich Low_complexity Low_complexity 1 23 0 2055 169 19 19 chr17 18576334 18576748 -70927805 - L1MC1 LINE L1 -14 6319 5906 561 161 0 0 chr17 18577731 18577824 -70926729 - Tigger7 DNA MER2_type 0 2487 2395 22 0 0 0 chr17 18578538 18578560 -70925993 + AT_rich Low_complexity Low_complexity 1 22 0 352 221 0 0 chr17 18578561 18578656 -70925897 - Charlie1 DNA MER1_type -45 2716 2622 2415 65 3 0 chr17 18578665 18578971 -70925582 + AluY SINE Alu 1 307 -4 575 234 126 0 chr17 18579018 18579185 -70925368 - Charlie1 DNA MER1_type -2562 199 12 2497 53 0 7 chr17 18579314 18579616 -70924937 + AluY SINE Alu 1 300 -11 23 54 0 0 chr17 18579857 18579894 -70924659 + AT_rich Low_complexity Low_complexity 1 37 0 2075 110 0 21 chr17 18580955 18581246 -70923307 + AluSg SINE Alu 16 300 -10 224 200 22 0 chr17 18581819 18581864 -70922689 + L2 LINE L2 3263 3308 -5 28 29 0 0 chr17 18582079 18582114 -70922439 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 18582811 18582839 -70921714 + AT_rich Low_complexity Low_complexity 1 28 0 2171 137 0 12 chr17 18585203 18585525 -70919028 + 7SLRNA srpRNA srpRNA 3 320 0 261 0 0 0 chr17 18586282 18586311 -70918242 + (A)n Simple_repeat Simple_repeat 1 29 0 27 0 0 0 chr17 18586637 18586664 -70917889 + AT_rich Low_complexity Low_complexity 1 27 0 2210 132 6 0 chr17 18587003 18587314 -70917239 + AluSp SINE Alu 1 313 0 432 284 102 25 chr17 18587396 18587632 -70916921 + L1MC/D LINE L1 5387 5640 -2168 322 202 61 53 chr17 18587740 18587854 -70916699 + L1MCa LINE L1 1992 2106 -4320 281 261 0 0 chr17 18588284 18588349 -70916204 - MER58A DNA MER1_type 0 224 160 328 315 11 0 chr17 18588355 18588444 -70916109 - MER58A DNA MER1_type -17 90 1 2843 274 135 45 chr17 18589015 18590408 -70914145 + L2 LINE L2 1778 3307 -6 198 103 0 0 chr17 18590464 18590493 -70914060 + (A)n Simple_repeat Simple_repeat 1 29 0 200 35 35 0 chr17 18591375 18591404 -70913149 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2372 45 42 0 chr17 18591966 18592255 -70912298 - AluY SINE Alu -10 301 1 2338 86 16 0 chr17 18592261 18592565 -70911988 - AluSc SINE Alu 0 309 1 421 287 179 31 chr17 18593309 18593532 -70911021 - L2 LINE L2 -1407 1907 1652 2449 100 0 0 chr17 18593998 18594308 -70910245 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 18594315 18594336 -70910217 + AT_rich Low_complexity Low_complexity 1 21 0 214 189 0 0 chr17 18594443 18594480 -70910073 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 715 264 32 37 chr17 18594695 18594911 -70909642 + MIR SINE MIR 23 237 -25 234 313 53 91 chr17 18596077 18596285 -70908268 + L2 LINE L2 2586 2785 -529 345 248 149 14 chr17 18596364 18596505 -70908048 - L1MA10 LINE L1 -9 6325 6166 841 230 4 32 chr17 18596512 18596760 -70907793 - L1MC/D LINE L1 -2192 5593 5353 650 260 68 0 chr17 18596873 18597050 -70907503 - MER58A DNA MER1_type -34 190 2 3213 220 96 82 chr17 18597050 18597527 -70907026 - L1MC/D LINE L1 -1923 4223 3755 2618 168 14 14 chr17 18597527 18598039 -70906514 - L1MC1 LINE L1 -1 6332 5821 3213 220 96 82 chr17 18598039 18598668 -70905885 - L1MC/D LINE L1 -2391 3755 3137 1816 179 43 6 chr17 18598668 18599020 -70905533 - MLT1A1 LTR MaLR 0 365 1 3213 220 96 82 chr17 18599020 18599434 -70905119 - L1MC/D LINE L1 -3009 3137 2670 2181 51 98 0 chr17 18599434 18599709 -70904844 + AluY SINE Alu 1 302 -9 3213 220 96 82 chr17 18599709 18599939 -70904614 - L1MC/D LINE L1 -3476 2670 2445 306 0 0 0 chr17 18599966 18600000 -70904553 + (T)n Simple_repeat Simple_repeat 1 34 0 1080 76 0 0 chr17 18600000 18600132 -70904421 - AluY SINE Alu -179 132 1 1261 257 41 38 chr17 18600180 18600691 -70903862 - L1MEc LINE L1 -3746 2471 1994 1740 120 0 4 chr17 18600691 18600958 -70903595 + L1PB1 LINE L1 5879 6144 -7 1261 257 41 38 chr17 18600958 18601010 -70903543 - L1MEc LINE L1 -4223 1994 1944 295 231 19 10 chr17 18601145 18601249 -70903304 - L1MEc LINE L1 -5264 1132 1028 2550 48 0 10 chr17 18601276 18601590 -70902963 + AluY SINE Alu 1 311 0 1483 301 68 14 chr17 18601621 18602286 -70902267 - L1MEc LINE L1 -5656 740 40 482 292 187 30 chr17 18602292 18602624 -70901929 + L2 LINE L2 2929 3312 -1 1088 226 63 19 chr17 18603249 18603519 -70901034 - AluJo SINE Alu -30 282 1 5343 114 20 10 chr17 18603766 18604732 -70899821 - L1PB3 LINE L1 0 6154 5162 1696 113 13 0 chr17 18604732 18604991 -70899562 - AluSp SINE Alu 0 303 42 459 71 0 0 chr17 18604991 18605047 -70899506 + Alu SINE Alu 235 290 -19 544 125 0 11 chr17 18605053 18605141 -70899412 - L1PB3 LINE L1 -43 6111 6025 387 0 0 0 chr17 18605142 18605185 -70899368 + (TA)n Simple_repeat Simple_repeat 1 43 0 872 144 0 0 chr17 18605203 18605328 -70899225 - FLAM_C SINE Alu -7 136 12 3439 194 68 4 chr17 18605338 18605927 -70898626 - L1PB3 LINE L1 -1144 5002 4341 207 114 0 0 chr17 18605927 18605962 -70898591 + (TTG)n Simple_repeat Simple_repeat 3 37 0 3439 194 68 4 chr17 18605962 18606212 -70898341 - L1PB3 LINE L1 -1805 4341 4109 261 0 0 0 chr17 18607965 18607994 -70896559 + (CA)n Simple_repeat Simple_repeat 2 30 0 2019 81 0 11 chr17 18608457 18608729 -70895824 + AluY SINE Alu 40 308 -3 1920 149 3 13 chr17 18609054 18609356 -70895197 + AluJb SINE Alu 1 299 -13 198 0 0 0 chr17 18611433 18611455 -70893098 + (T)n Simple_repeat Simple_repeat 1 22 0 1105 81 0 0 chr17 18611474 18611610 -70892943 - AluSq/x SINE Alu -177 136 1 414 320 59 0 chr17 18611874 18612027 -70892526 - L2 LINE L2 -431 2883 2722 2840 0 0 0 chr17 18612361 18612665 -70891888 - AluYa5 SINE Alu -7 304 1 27 62 0 0 chr17 18612972 18613020 -70891533 + AT_rich Low_complexity Low_complexity 1 48 0 699 147 7 33 chr17 18613521 18613671 -70890882 - L1MB8 LINE L1 -1 6177 6032 3454 167 27 14 chr17 18613676 18614443 -70890110 - L1MB8 LINE L1 -208 5970 5188 28 29 0 0 chr17 18614450 18614485 -70890068 + AT_rich Low_complexity Low_complexity 1 35 0 864 142 8 0 chr17 18614485 18614605 -70889948 - FLAM_C SINE Alu -22 121 1 1096 208 143 5 chr17 18614607 18614986 -70889567 - L1MB8 LINE L1 -945 5201 4771 819 261 104 17 chr17 18616351 18616778 -70887775 - MLT1G1 LTR MaLR -2 593 45 612 242 0 0 chr17 18616821 18616945 -70887608 - FLAM_A SINE Alu -18 124 1 866 140 12 7 chr17 18616955 18617130 -70887423 - L1MA3 LINE L1 -7 6298 6118 1173 122 0 6 chr17 18617140 18617304 -70887249 + AluSg/x SINE Alu 134 296 -14 3618 166 29 46 chr17 18617307 18618840 -70885713 - L1MA5 LINE L1 -196 6104 4600 4630 152 22 29 chr17 18618882 18619917 -70884636 - L1PA16 LINE L1 -1 6816 5792 195 186 0 0 chr17 18621470 18621513 -70883040 + T-rich Low_complexity Low_complexity 1 43 0 210 176 0 59 chr17 18621542 18621593 -70882960 + CT-rich Low_complexity Low_complexity 2 49 0 196 54 0 89 chr17 18622057 18622113 -70882440 + (TCCC)n Simple_repeat Simple_repeat 1 51 0 8935 239 44 50 chr17 18622116 18623237 -70881316 - L1PA16 LINE L1 -998 5799 4673 712 188 0 40 chr17 18623237 18623386 -70881167 - FLAM_C SINE Alu 0 143 1 8935 239 44 50 chr17 18623386 18624175 -70880378 - L1PA16 LINE L1 -2124 4673 3881 294 29 0 0 chr17 18624175 18624210 -70880343 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 8935 239 44 50 chr17 18624210 18626521 -70878032 - L1PA16 LINE L1 -2916 3881 1495 2241 130 0 12 chr17 18627260 18627598 -70876955 + MER1B DNA MER1_type 4 337 0 241 329 6 49 chr17 18627697 18627861 -70876692 - L1PA16 LINE L1 -5268 1519 1363 888 346 33 23 chr17 18627898 18628473 -70876080 - L1PA16 LINE L1 -6206 581 1 1448 174 29 80 chr17 18628494 18628971 -70875582 - L1 LINE L1 -1536 5672 5220 * 5950 232 85 25 chr17 18628964 18630199 -70874354 - L1 LINE L1 -2399 4809 3649 182 37 37 0 chr17 18630199 18630226 -70874327 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 5950 232 85 25 chr17 18630226 18630751 -70873802 - L1 LINE L1 -3559 3649 3157 1956 162 0 13 chr17 18630751 18631066 -70873487 - AluSx SINE Alu -1 311 1 5950 232 85 25 chr17 18631066 18633003 -70871550 - L1 LINE L1 -4051 3157 841 798 235 5 0 chr17 18633095 18633305 -70871248 - L1 LINE L1 -6628 581 13 322 250 0 25 chr17 18634552 18634632 -70869921 - Tigger5 DNA MER2_type -2244 79 2 1045 283 142 20 chr17 18635008 18635501 -70869052 - MLT1G1 LTR MaLR 0 595 2 2143 78 19 42 chr17 18636250 18636558 -70867995 + AluY SINE Alu 1 301 -10 504 184 9 0 chr17 18638710 18638819 -70865734 - L1MA9 LINE L1 -39 6273 6164 881 196 0 46 chr17 18640458 18640631 -70863922 + FAM SINE Alu 2 166 -9 1713 131 3 82 chr17 18641126 18641501 -70863052 - MER4A LTR ERV1 0 664 261 569 124 21 10 chr17 18641501 18641598 -70862955 - MER4A LTR ERV1 -566 98 1 2199 110 6 31 chr17 18641670 18641987 -70862566 + AluSx SINE Alu 1 309 -3 2353 103 0 0 chr17 18642224 18642526 -70862027 + AluSx SINE Alu 2 303 -9 4744 75 29 15 chr17 18643084 18643735 -70860818 - PABL_A LTR ERV1 0 660 1 2250 120 0 0 chr17 18645027 18645335 -70859218 - AluSg SINE Alu 0 310 3 2420 90 0 0 chr17 18645349 18645660 -70858893 - AluY SINE Alu 0 311 1 335 274 53 26 chr17 18645740 18645853 -70858700 + MIR3 SINE MIR 45 160 -48 278 291 159 72 chr17 18647675 18648174 -70856379 + L2 LINE L2 2745 3272 0 1573 201 7 3 chr17 18648378 18648686 -70855867 + AluJb SINE Alu 1 309 0 1214 238 119 9 chr17 18649449 18649878 -70854675 - L1MC4 LINE L1 -150 7892 7417 7658 149 8 1 chr17 18649897 18652018 -70852535 - L1PA11 LINE L1 -1 7611 5484 12964 183 16 18 chr17 18652019 18653580 -70850973 + L1PB1 LINE L1 2801 4363 -2504 2104 153 22 30 chr17 18653580 18653947 -70850606 + THE1B LTR MaLR 1 364 0 12964 183 16 18 chr17 18653947 18654732 -70849821 + L1PB1 LINE L1 4363 5148 -1719 180 0 0 0 chr17 18654732 18654752 -70849801 + (TAA)n Simple_repeat Simple_repeat 2 21 0 12964 183 16 18 chr17 18654752 18656483 -70848070 + L1PB1 LINE L1 5148 6865 -2 8833 207 13 6 chr17 18656488 18659205 -70845348 - L1PA11 LINE L1 -2932 4652 1130 666 169 34 72 chr17 18659228 18659435 -70845118 - L1MC4 LINE L1 -635 7407 7209 938 205 48 92 chr17 18659485 18659876 -70844677 - L1MD3 LINE L1 0 8041 7682 380 250 0 19 chr17 18659924 18660032 -70844521 - L1P3 LINE L1 -5073 1388 1283 1876 263 106 70 chr17 18660034 18661042 -70843511 - L1MC4a LINE L1 -250 7558 6515 786 205 44 44 chr17 18661043 18661248 -70843305 - Tigger2 DNA MER2_type -3 2715 2511 459 191 0 0 chr17 18661248 18661342 -70843211 - L1 LINE L1 -1458 4688 4595 * 757 206 0 0 chr17 18661339 18661509 -70843044 + L1P LINE L1 4724 4893 -1253 2290 130 29 11 chr17 18661510 18662136 -70842417 - L1P4 LINE L1 -529 5636 5000 403 143 0 0 chr17 18662136 18662192 -70842361 - AluJ/FLAM SINE Alu -255 57 2 1043 113 0 0 chr17 18663500 18663641 -70840912 + AluSp/q SINE Alu 157 297 -16 2276 91 3 7 chr17 18663643 18663987 -70840566 + AluSp SINE Alu 1 343 0 199 192 10 162 chr17 18664471 18664570 -70839983 + MER5A DNA MER1_type 1 84 -105 188 345 48 12 chr17 18664629 18664713 -70839840 - MER5A DNA MER1_type -102 87 1 185 333 234 12 chr17 18664860 18665031 -70839522 - MIR SINE MIR -18 244 36 460 279 124 63 chr17 18665033 18665348 -70839205 + MER102b DNA MER1_type 1 334 -7 1274 167 9 32 chr17 18665816 18666032 -70838521 - AluJb SINE Alu -25 287 77 2031 149 13 10 chr17 18666065 18666373 -70838180 + AluJb SINE Alu 1 309 -3 2281 108 13 0 chr17 18666484 18666791 -70837762 - AluSp SINE Alu -2 311 1 224 248 238 9 chr17 18666947 18667052 -70837501 - MIR SINE MIR -17 245 117 2082 119 8 72 chr17 18667448 18667808 -70836745 - MER1B DNA MER1_type 0 337 1 680 286 91 35 chr17 18668135 18668621 -70835932 + L1ME4a LINE L1 5608 6120 -1 1648 140 0 0 chr17 18668701 18668929 -70835624 + AluJb SINE Alu 85 312 0 1736 151 60 17 chr17 18670825 18671124 -70833429 - AluJo SINE Alu 0 312 1 2275 132 0 3 chr17 18672085 18672396 -70832157 - AluSx SINE Alu -2 310 1 2221 96 0 54 chr17 18672592 18672905 -70831648 - AluY SINE Alu -15 296 1 344 223 0 29 chr17 18672917 18673020 -70831533 - L1ME2 LINE L1 -1 6163 6064 377 311 148 27 chr17 18673838 18674021 -70830532 + MIR SINE MIR 34 238 -24 637 212 65 54 chr17 18674062 18674105 -70830448 + Charlie1 DNA MER1_type 32 73 -2688 1949 132 0 21 chr17 18674105 18674428 -70830125 - AluJb SINE Alu 0 317 1 637 212 65 54 chr17 18674428 18674567 -70829986 + Charlie1 DNA MER1_type 73 217 -2544 423 183 54 0 chr17 18674581 18674674 -70829879 + Charlie1 DNA MER1_type 2634 2731 -30 247 250 52 73 chr17 18674710 18674806 -70829747 + MIR SINE MIR 162 255 -7 1620 177 50 3 chr17 18675733 18676016 -70828537 + AluJo SINE Alu 3 298 -14 2354 96 0 29 chr17 18676550 18676862 -70827691 + AluSx SINE Alu 1 303 -9 2174 107 0 4 chr17 18676918 18677230 -70827323 + AluSc SINE Alu 1 311 0 21 71 0 0 chr17 18678771 18678813 -70825740 + AT_rich Low_complexity Low_complexity 1 42 0 1775 131 6 68 chr17 18679820 18680156 -70824397 + MER1B DNA MER1_type 1 315 -24 1012 229 9 0 chr17 18680214 18680428 -70824125 - MER20 DNA MER1_type 0 219 4 299 327 9 9 chr17 18680455 18680568 -70823985 - L2 LINE L2 -951 2363 2251 358 332 95 43 chr17 18680835 18681046 -70823507 - MIR SINE MIR -13 249 28 243 250 12 6 chr17 18681844 18682004 -70822549 + (TG)n Simple_repeat Simple_repeat 1 161 0 199 262 6 6 chr17 18682031 18682199 -70822354 + (TG)n Simple_repeat Simple_repeat 1 168 0 234 195 0 0 chr17 18682253 18682294 -70822259 + L2 LINE L2 3016 3056 -216 296 275 12 12 chr17 18682438 18682518 -70822035 + L2 LINE L2 3229 3308 -5 491 232 252 0 chr17 18682876 18683027 -70821526 - MER5A DNA MER1_type 0 189 1 2056 103 35 35 chr17 18683215 18683526 -70821027 + AluY SINE Alu 1 311 0 319 216 221 7 chr17 18683573 18683710 -70820843 + MIR SINE MIR 16 183 -62 190 266 0 62 chr17 18683770 18683834 -70820719 + MIR SINE MIR 93 149 -59 442 261 244 17 chr17 18683927 18684165 -70820388 + L2 LINE L2 3021 3312 -1 279 346 96 13 chr17 18684753 18684909 -70819644 + MIR SINE MIR 13 181 -81 190 206 0 0 chr17 18684909 18684943 -70819610 + MER5A DNA MER1_type 1 34 -155 1921 143 0 7 chr17 18685407 18685686 -70818867 - AluSx SINE Alu -35 277 1 231 250 86 26 chr17 18685924 18686040 -70818513 + L1ME4a LINE L1 5559 5681 -440 756 241 6 13 chr17 18686047 18686205 -70818348 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 18686208 18686235 -70818318 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 641 255 145 22 chr17 18686286 18686604 -70817949 + L1ME4a LINE L1 5730 6086 -35 812 206 99 97 chr17 18686946 18687368 -70817185 + MER113 DNA MER1_type? 48 470 -51 324 248 171 0 chr17 18687468 18687573 -70816980 + L2 LINE L2 3149 3271 -1 296 279 330 6 chr17 18687989 18688168 -70816385 - MIR SINE MIR -20 242 6 242 301 135 23 chr17 18688312 18688445 -70816108 - L2 LINE L2 -6 3266 3119 735 130 10 0 chr17 18688892 18688992 -70815561 - AluJ/FLAM SINE Alu -210 102 2 929 264 90 0 chr17 18688994 18689328 -70815225 - MER113 DNA MER1_type? -112 409 46 2525 61 0 0 chr17 18690162 18690455 -70814098 + AluY SINE Alu 14 306 -5 345 269 126 8 chr17 18691510 18691629 -70812924 + MIR SINE MIR 7 139 -123 578 258 138 84 chr17 18691642 18692033 -70812520 - L2 LINE L2 -20 3252 2841 2270 117 0 0 chr17 18692054 18692353 -70812200 + AluSx SINE Alu 1 299 -13 263 268 28 0 chr17 18692360 18692431 -70812122 + MIR SINE MIR 162 234 -28 266 169 153 0 chr17 18692883 18692942 -70811611 + L2 LINE L2 3204 3271 -1 835 155 23 0 chr17 18694976 18695105 -70809448 - FLAM_A SINE Alu 0 133 2 233 343 200 14 chr17 18695648 18695788 -70808765 - MER5A DNA MER1_type 0 189 24 332 294 112 37 chr17 18696149 18696316 -70808237 + MIR3 SINE MIR 8 183 -25 498 300 40 13 chr17 18696832 18696982 -70807571 + MIR3 SINE MIR 33 185 -42 211 302 0 0 chr17 18697385 18697471 -70807082 + (CCA)n Simple_repeat Simple_repeat 2 87 0 390 272 31 63 chr17 18698477 18698668 -70805885 + MIR SINE MIR 28 212 -50 4518 246 103 47 chr17 18700424 18700691 -70803862 + HAL1 LINE L1 102 353 -2154 2418 83 0 3 chr17 18700691 18700991 -70803562 + AluY SINE Alu 1 299 -12 4518 246 103 47 chr17 18700991 18701658 -70802895 + HAL1 LINE L1 353 981 -1526 1960 169 0 0 chr17 18701658 18701954 -70802599 - AluJb SINE Alu -16 296 1 4518 246 103 47 chr17 18701954 18703176 -70801377 + HAL1 LINE L1 981 2380 -127 3572 58 0 9 chr17 18703247 18703695 -70800858 + L1PA6 LINE L1 5711 6154 0 2373 88 0 10 chr17 18703700 18703996 -70800557 + AluY SINE Alu 1 293 -18 27 0 0 0 chr17 18704022 18704049 -70800504 + AT_rich Low_complexity Low_complexity 1 27 0 461 298 13 20 chr17 18704638 18704810 -70799743 + MIR SINE MIR 3 174 -88 215 280 0 0 chr17 18707635 18707710 -70796843 + (CCA)n Simple_repeat Simple_repeat 1 75 0 350 276 118 7 chr17 18708497 18708649 -70795904 + MIR3 SINE MIR 33 201 -7 420 268 39 0 chr17 18708728 18708855 -70795698 + MIR SINE MIR 20 151 -111 243 316 90 13 chr17 18709374 18709523 -70795030 - MIR SINE MIR -72 136 11 301 226 28 75 chr17 18709555 18709661 -70794892 - MIR SINE MIR -64 144 44 5801 130 26 35 chr17 18710095 18711073 -70793480 - LTR5 LTR ERVK 0 969 1 443 266 65 0 chr17 18712449 18712573 -70791980 + MIR SINE MIR 88 219 -43 347 269 108 38 chr17 18712598 18712784 -70791769 - L2 LINE L2 -12 3301 3103 203 326 22 56 chr17 18714222 18714311 -70790242 + MIR SINE MIR 61 146 -62 233 234 9 103 chr17 18715595 18715702 -70788851 - MIR SINE MIR -60 148 52 190 286 71 24 chr17 18721627 18721711 -70782842 - MIR3 SINE MIR -21 187 100 335 383 37 10 chr17 18723950 18724352 -70780201 + L2 LINE L2 2498 2910 -404 312 292 118 21 chr17 18725387 18725531 -70779022 + MIR3 SINE MIR 44 201 -7 216 0 0 0 chr17 18725862 18725886 -70778667 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 351 309 88 0 chr17 18726501 18726637 -70777916 + MIR SINE MIR 81 228 -34 23 0 0 0 chr17 18726664 18726687 -70777866 + AT_rich Low_complexity Low_complexity 1 23 0 1963 165 35 2 chr17 18727602 18728002 -70776551 + L1PB4 LINE L1 5539 5951 -205 1292 47 0 134 chr17 18728002 18728234 -70776319 - LTR14A LTR ERVK -143 201 1 232 240 27 40 chr17 18728302 18728377 -70776176 - MIR SINE MIR -133 129 56 541 288 76 0 chr17 18728427 18728611 -70775942 - L2 LINE L2 0 3313 3116 288 238 12 12 chr17 18728638 18728718 -70775835 - MER3 DNA MER1_type -5 204 125 2184 91 0 7 chr17 18728719 18729015 -70775538 + AluY SINE Alu 1 294 -17 1806 101 4 0 chr17 18730203 18730450 -70774103 + AluSx SINE Alu 53 300 -12 2198 113 6 0 chr17 18730845 18731156 -70773397 - AluSp SINE Alu 0 313 1 491 257 66 0 chr17 18731328 18731480 -70773073 - MER3 DNA MER1_type -47 162 1 311 277 227 29 chr17 18731574 18731917 -70772636 - L2 LINE L2 -351 2963 2553 202 261 0 58 chr17 18732328 18732397 -70772156 + L3b LINE CR1 1319 1383 -200 257 178 314 8 chr17 18732511 18732629 -70771924 + L2 LINE L2 2895 3048 -265 416 353 8 0 chr17 18732675 18732808 -70771745 + L2 LINE L2 3180 3313 0 267 278 14 0 chr17 18732905 18732977 -70771576 - MIR SINE MIR -74 134 62 184 145 161 32 chr17 18733766 18733828 -70770725 + L2 LINE L2 2884 2953 -360 257 319 52 7 chr17 18734035 18734170 -70770383 + MIR3 SINE MIR 51 191 -17 1266 270 67 45 chr17 18734721 18735344 -70769209 + L1MC4a LINE L1 5256 5892 -1916 331 291 119 0 chr17 18735920 18736054 -70768499 - MIR SINE MIR -100 162 13 334 295 130 25 chr17 18736417 18736617 -70767936 - MER69 DNA AcHobo -1989 537 317 397 263 51 40 chr17 18736652 18736827 -70767726 - MER69 DNA AcHobo -2319 207 31 209 238 95 0 chr17 18737539 18737602 -70766951 + L2 LINE L2 3189 3257 -56 320 272 132 9 chr17 18737714 18737828 -70766725 - MIR SINE MIR -117 145 18 1858 171 10 7 chr17 18738420 18738730 -70765823 + AluSx SINE Alu 1 311 -1 319 248 29 19 chr17 18738731 18738836 -70765717 + L1MC4 LINE L1 7933 8038 -4 467 353 59 28 chr17 18739002 18739356 -70765197 - L1ME4a LINE L1 -224 5897 5533 245 301 96 12 chr17 18739551 18739634 -70764919 + MIR SINE MIR 170 259 -3 493 303 117 0 chr17 18739643 18739831 -70764722 + MIR SINE MIR 43 252 -10 277 286 41 31 chr17 18740192 18740290 -70764263 - L3b LINE CR1 -140 1443 1345 998 253 54 39 chr17 18741407 18741739 -70762814 + L1ME3 LINE L1 5801 6137 -25 451 262 63 0 chr17 18741901 18742027 -70762526 - MER5A DNA MER1_type -49 140 7 1549 190 150 34 chr17 18742252 18742605 -70761948 - MSTD LTR MaLR 0 396 3 503 130 0 104 chr17 18743201 18743316 -70761237 + L1MB3 LINE L1 5607 5709 -474 578 115 0 0 chr17 18743316 18743394 -70761159 - AluSg/x SINE Alu -16 293 216 950 155 52 3 chr17 18743394 18743769 -70760784 + L1MB3 LINE L1 5706 6155 -28 2251 99 3 0 chr17 18743793 18744095 -70760458 + AluSx SINE Alu 1 303 -9 446 255 121 52 chr17 18744140 18744371 -70760182 - MLT1J LTR MaLR -46 465 219 1129 143 49 90 chr17 18744406 18744651 -70759902 - AluJo SINE Alu -77 235 1 232 231 154 0 chr17 18744776 18744854 -70759699 + LTR16A LTR ERVL 10 99 -351 353 309 48 5 chr17 18744945 18745133 -70759420 + LTR16B LTR ERVL 268 463 -1 277 265 15 0 chr17 18745134 18745202 -70759351 + L2 LINE L2 3230 3298 -15 311 313 109 43 chr17 18746549 18746760 -70757793 + L1MC/D LINE L1 5176 5400 -746 338 339 145 8 chr17 18746818 18747066 -70757487 + L1MC/D LINE L1 5437 5718 -2090 202 332 17 12 chr17 18747303 18747390 -70757163 + MIR SINE MIR 85 176 -32 236 233 14 41 chr17 18747468 18747541 -70757012 - MIR SINE MIR -127 135 65 697 270 70 7 chr17 18747675 18747975 -70756578 + LTR16C LTR ERVL 155 473 -18 192 255 78 0 chr17 18747989 18748040 -70756513 - MIR SINE MIR -188 74 20 607 130 84 97 chr17 18748046 18748200 -70756353 - FRAM SINE Alu -8 168 17 673 211 99 23 chr17 18749181 18749436 -70755117 - MLT1C LTR MaLR -185 282 1 472 331 15 11 chr17 18750449 18750617 -70753936 - L1ME4a LINE L1 -246 5875 5704 2068 107 33 0 chr17 18750617 18750916 -70753637 + AluSq SINE Alu 2 310 -3 472 331 15 11 chr17 18750916 18751007 -70753546 - L1ME4a LINE L1 -417 5704 5615 1362 220 18 0 chr17 18751129 18751411 -70753142 - AluJo SINE Alu -14 298 12 1848 151 3 16 chr17 18751504 18751808 -70752745 + AluSx SINE Alu 1 300 -12 1916 141 7 3 chr17 18751910 18752207 -70752346 - AluJb SINE Alu -10 302 5 3181 102 13 83 chr17 18752226 18752827 -70751726 + LTR8 LTR ERV1 132 690 -1 585 325 55 13 chr17 18754823 18755374 -70749179 - ERVL LTR ERVL -1140 4624 3963 25 0 0 0 chr17 18756022 18756047 -70748506 + AT_rich Low_complexity Low_complexity 1 25 0 186 143 0 0 chr17 18757531 18757566 -70746987 + (GGA)n Simple_repeat Simple_repeat 2 36 0 610 268 68 27 chr17 18758137 18758244 -70746309 + L1M4c LINE L1 2103 2204 -4180 2379 106 0 0 chr17 18758244 18758547 -70746006 + AluSg1 SINE Alu 1 303 -6 610 268 68 27 chr17 18758547 18758808 -70745745 + L1M4c LINE L1 2204 2486 -3898 271 177 63 0 chr17 18758846 18758925 -70745628 + L1MA9 LINE L1 6229 6312 0 771 256 19 55 chr17 18758939 18759044 -70745509 + L1MA10 LINE L1 6023 6130 -204 2340 100 0 3 chr17 18759044 18759343 -70745210 + AluSc SINE Alu 3 300 -9 771 256 19 55 chr17 18759343 18759546 -70745007 + L1MA10 LINE L1 6130 6320 -14 1487 249 83 30 chr17 18759556 18760415 -70744138 + L1MCa LINE L1 2316 3203 -3223 845 292 102 21 chr17 18761172 18761556 -70742997 + MER57B LTR ERV1 10 424 -10 253 385 32 5 chr17 18764472 18764659 -70739894 - ERVL LTR ERVL -785 2771 2580 1136 77 0 30 chr17 18765076 18765244 -70739309 + L1PB1 LINE L1 5982 6144 -7 25 51 0 0 chr17 18765530 18765569 -70738984 + AT_rich Low_complexity Low_complexity 1 39 0 334 297 88 37 chr17 18766248 18766544 -70738009 - ERVL LTR ERVL -3726 1959 1649 596 260 52 34 chr17 18766975 18767244 -70737309 + L1MCa LINE L1 4170 4443 -1983 880 230 10 0 chr17 18767260 18767464 -70737089 + L1PB4 LINE L1 4874 5079 -1067 2739 179 47 16 chr17 18767464 18768075 -70736478 + L1PB4 LINE L1 5514 6156 0 417 274 72 20 chr17 18769472 18769625 -70734928 - L1M4 LINE L1 -1775 4371 4211 205 241 0 0 chr17 18769625 18769679 -70734874 + (CTTA)n Simple_repeat Simple_repeat 1 54 0 824 300 51 19 chr17 18769789 18770432 -70734121 - L1M4 LINE L1 -2061 4085 3422 2307 116 0 0 chr17 18770434 18770744 -70733809 - AluSg SINE Alu 0 310 1 996 85 0 8 chr17 18770744 18770873 -70733680 - AluSq/x SINE Alu -184 128 1 345 282 91 39 chr17 18770875 18771088 -70733465 - L1M4 LINE L1 -2721 3425 3225 2490 64 0 3 chr17 18771088 18771383 -70733170 - AluY SINE Alu -17 294 1 345 282 91 39 chr17 18771383 18771609 -70732944 - L1M4 LINE L1 -2921 3225 2963 1559 298 114 80 chr17 18773198 18773602 -70730951 - L1M4 LINE L1 -1719 4427 4039 2325 103 3 0 chr17 18773602 18773902 -70730651 - AluSq SINE Alu -12 301 1 2432 97 3 0 chr17 18773912 18774223 -70730330 - AluSp SINE Alu -1 312 1 1559 298 114 80 chr17 18774223 18774488 -70730065 - L1M4 LINE L1 -2115 4031 3777 2230 80 3 21 chr17 18774488 18774811 -70729742 - AluY SINE Alu 0 318 1 1559 298 114 80 chr17 18774811 18775535 -70729018 - L1M4 LINE L1 -2369 3777 2972 1188 241 30 73 chr17 18776114 18776702 -70727851 - L1MC/D LINE L1 -746 5400 5219 * 8566 102 6 5 chr17 18776688 18778514 -70726039 + L1PA8A LINE L1 4052 5873 -258 2443 103 0 0 chr17 18778587 18778899 -70725654 + AluSx SINE Alu 1 312 0 596 253 130 0 chr17 18778922 18779183 -70725370 - L1M4 LINE L1 -841 5305 5011 876 122 0 0 chr17 18779515 18779638 -70724915 + FRAM SINE Alu 46 168 -8 360 0 0 0 chr17 18780140 18780180 -70724373 + (TG)n Simple_repeat Simple_repeat 1 40 0 5293 155 29 10 chr17 18780547 18781657 -70722896 - L1PA16 LINE L1 -21 6145 4991 2205 84 0 0 chr17 18781657 18781930 -70722623 - AluY SINE Alu -2 309 37 5293 155 29 10 chr17 18781930 18782457 -70722096 - L1PA16 LINE L1 -1175 4991 4475 591 277 83 22 chr17 18782471 18782749 -70721804 - L2 LINE L2 0 3313 3019 262 244 148 0 chr17 18783471 18783586 -70720967 + MLT1E2 LTR MaLR 226 357 -269 294 106 0 0 chr17 18784485 18784532 -70720021 + (TG)n Simple_repeat Simple_repeat 1 47 0 3611 133 33 18 chr17 18784570 18785200 -70719353 + MER51C LTR ERV1 1 640 0 325 380 63 11 chr17 18785395 18785666 -70718887 - L1ME LINE L1 -531 5639 5355 639 297 12 40 chr17 18785924 18786173 -70718380 - MIR SINE MIR -14 248 7 386 278 31 52 chr17 18786179 18786370 -70718183 - L2 LINE L2 -169 3103 2917 421 135 48 127 chr17 18787110 18787186 -70717367 - MER103 DNA DNA -47 119 55 2476 84 7 0 chr17 18787186 18787495 -70717058 - AluSq SINE Alu -2 311 1 421 135 48 127 chr17 18787495 18787544 -70717009 - MER103 DNA DNA -111 55 4 2138 175 50 19 chr17 18788275 18788738 -70715815 - L1MB7 LINE L1 -10 6174 5698 1104 157 6 0 chr17 18788738 18788897 -70715656 + AluSx SINE Alu 1 160 -152 1042 132 13 0 chr17 18788898 18789050 -70715503 - AluJb SINE Alu -148 164 11 3278 227 41 18 chr17 18789059 18789743 -70714810 + L1M4 LINE L1 3995 4707 -1439 1481 174 15 67 chr17 18789743 18790071 -70714482 + AluJo SINE Alu 1 311 -1 3278 227 41 18 chr17 18790071 18790290 -70714263 + L1M4 LINE L1 4707 4919 -1227 2167 108 0 3 chr17 18790302 18790588 -70713965 + AluSq SINE Alu 22 306 -7 1171 177 0 5 chr17 18790636 18790834 -70713719 + AluJo SINE Alu 98 294 -18 481 275 8 8 chr17 18791032 18791163 -70713390 - MIR SINE MIR -58 150 20 522 181 7 81 chr17 18791826 18791975 -70712578 - MER20 DNA MER1_type -52 167 30 1684 137 3 129 chr17 18792233 18792590 -70711963 - AluJo SINE Alu 0 312 1 388 224 18 109 chr17 18792592 18792636 -70711917 + L1MD3 LINE L1 7846 7892 -103 1637 71 0 0 chr17 18792636 18792833 -70711720 - AluY SINE Alu -12 299 103 388 224 18 109 chr17 18792833 18792953 -70711600 + L1MD3 LINE L1 7892 7995 0 667 281 135 16 chr17 18793321 18793817 -70710736 - L2 LINE L2 -210 3103 2544 1020 77 23 0 chr17 18793930 18794060 -70710493 + AluSq/x SINE Alu 1 133 -180 2490 68 0 7 chr17 18794079 18794375 -70710178 + AluY SINE Alu 2 295 -16 458 92 0 0 chr17 18794892 18794957 -70709596 - AluSx SINE Alu -13 299 235 1087 155 39 11 chr17 18794957 18795138 -70709415 - AluSx SINE Alu -126 186 1 421 279 130 0 chr17 18795517 18795678 -70708875 - MER5A DNA MER1_type -2 187 6 2701 74 11 3 chr17 18796800 18797177 -70707376 + MER41A LTR ERV1 1 380 -174 531 62 38 12 chr17 18797182 18797262 -70707291 + MER4B LTR ERV1 171 252 -358 * 1314 110 5 5 chr17 18797261 18797461 -70707092 + MER4E LTR ERV1 567 766 0 2163 146 6 0 chr17 18797461 18797811 -70706742 - MER41B LTR ERV1 -283 352 1 21 36 0 0 chr17 18797951 18797979 -70706574 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 18798843 18798864 -70705689 + (GCTG)n Simple_repeat Simple_repeat 4 24 0 186 143 0 0 chr17 18800418 18800453 -70704100 + (GGA)n Simple_repeat Simple_repeat 2 36 0 2193 122 0 0 chr17 18804738 18805034 -70699519 - AluSq SINE Alu -17 296 1 301 292 88 50 chr17 18808816 18809049 -70695504 + MIR SINE MIR 3 241 -21 242 356 37 55 chr17 18809702 18809865 -70694688 + MIR SINE MIR 84 243 -19 326 210 4 21 chr17 18810715 18810914 -70693639 + HSAT5 Satellite Satellite 1 195 -1 279 248 119 28 chr17 18811554 18811663 -70692890 + L1MEc LINE L1 1939 2057 -4339 213 65 0 0 chr17 18811670 18811701 -70692852 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 321 118 0 0 chr17 18811700 18811751 -70692802 + (TA)n Simple_repeat Simple_repeat 2 52 0 1369 211 11 18 chr17 18811758 18812042 -70692511 - AluJo SINE Alu -30 282 1 920 239 8 51 chr17 18812097 18812331 -70692222 + MER58A DNA MER1_type 1 224 0 424 301 98 0 chr17 18812333 18812486 -70692067 - L2 LINE L2 -653 2661 2494 1643 167 34 78 chr17 18813046 18813454 -70691099 + MLT1B LTR MaLR 1 390 0 582 209 0 0 chr17 18813824 18813958 -70690595 + (CA)n Simple_repeat Simple_repeat 2 135 0 720 204 10 3 chr17 18814455 18814754 -70689799 + CT-rich Low_complexity Low_complexity 1 301 0 2059 184 6 3 chr17 18816128 18816471 -70688082 + MER2 DNA MER2_type 1 344 0 2383 212 55 9 chr17 18816830 18817411 -70687142 - L1MB7 LINE L1 -18 6166 5559 236 301 133 0 chr17 18817595 18817708 -70686845 - MIR3 SINE MIR -11 197 70 359 211 92 14 chr17 18818418 18818560 -70685993 + MLT1C LTR MaLR 112 264 -203 405 289 37 0 chr17 18819141 18819276 -70685277 + LTR52 LTR ERVL 279 418 -3 184 283 101 30 chr17 18819319 18819418 -70685135 + L2 LINE L2 2871 2976 -296 358 310 177 0 chr17 18819487 18819645 -70684908 - MIR SINE MIR -61 201 16 313 317 50 25 chr17 18820538 18820658 -70683895 + MIR SINE MIR 21 143 -119 530 244 81 53 chr17 18820939 18821185 -70683368 + MLT1H LTR MaLR 79 331 -218 312 337 59 64 chr17 18821625 18821699 -70682854 - L1MCa LINE L1 -3993 2433 2360 1917 167 0 0 chr17 18821699 18822005 -70682548 - AluSx SINE Alu 0 312 7 312 337 59 64 chr17 18822005 18822117 -70682436 - L1MCa LINE L1 -4066 2360 2248 772 213 22 44 chr17 18822121 18822316 -70682237 + L1PA16 LINE L1 3522 3713 -2433 5198 194 18 14 chr17 18822316 18823494 -70681059 + L1PA16 LINE L1 4981 6165 -1 772 213 22 44 chr17 18823494 18823524 -70681029 + L1PA16 LINE L1 3713 3742 -2404 560 255 32 0 chr17 18824249 18824437 -70680116 - L1M4 LINE L1 -3113 3033 2840 2272 93 0 10 chr17 18824816 18825118 -70679435 - AluSq SINE Alu -14 299 1 188 57 0 57 chr17 18825221 18825256 -70679297 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 648 243 153 27 chr17 18825299 18825521 -70679032 + MIR SINE MIR 1 250 -12 303 230 18 97 chr17 18826239 18826352 -70678201 + MIR SINE MIR 12 115 -147 450 245 141 27 chr17 18826361 18826545 -70678008 - L2 LINE L2 -11 3302 3098 489 65 0 0 chr17 18826735 18826797 -70677756 + Alu SINE Alu 1 62 -256 2623 45 0 0 chr17 18877169 18877477 -70627076 + AluY SINE Alu 1 308 -3 1045 190 146 13 chr17 18877824 18878140 -70626413 - L1MB7 LINE L1 0 6184 5827 2463 192 94 16 chr17 18878350 18878964 -70625589 + L1MB7 LINE L1 5523 6184 0 1982 96 0 119 chr17 18878973 18879326 -70625227 + AluSx SINE Alu 1 311 -1 2214 110 0 7 chr17 18879617 18879918 -70624635 + AluSg SINE Alu 1 299 -11 1443 156 118 15 chr17 18880316 18880473 -70624080 - AluJo SINE Alu -21 291 152 1782 188 0 3 chr17 18880473 18880771 -70623782 - AluJb SINE Alu -15 297 1 1443 156 118 15 chr17 18880771 18880876 -70623677 - AluJo SINE Alu -160 152 2 481 241 35 0 chr17 18880925 18881041 -70623512 + MER3 DNA MER1_type 1 120 -89 307 91 0 0 chr17 18881197 18881241 -70623312 - MIR SINE MIR -61 147 104 279 240 120 0 chr17 18881412 18881512 -70623041 + Charlie7 DNA MER1_type 1 112 -2500 4806 232 71 22 chr17 18884896 18885562 -70618991 + L1MC3 LINE L1 6281 6913 -872 2354 156 26 21 chr17 18885562 18885992 -70618561 + MSTB1 LTR MaLR 1 432 0 4806 232 71 22 chr17 18885992 18886757 -70617796 + L1MC3 LINE L1 6913 7783 -2 225 0 0 0 chr17 18886841 18886866 -70617687 + (A)n Simple_repeat Simple_repeat 1 25 0 243 390 24 0 chr17 18887807 18887930 -70616623 - L3 LINE CR1 -201 1376 1251 645 81 61 0 chr17 18888936 18889035 -70615518 - L1MB3 LINE L1 -199 5984 5880 2351 189 80 37 chr17 18889135 18889597 -70614956 - L1MB3 LINE L1 -295 5885 5444 1572 142 24 45 chr17 18889597 18889885 -70614668 - AluJo SINE Alu -1 311 30 2351 189 80 37 chr17 18889885 18890315 -70614238 - L1MB3 LINE L1 -736 5444 4969 513 230 7 7 chr17 18891276 18891415 -70613138 - L1MB7 LINE L1 -55 6129 5991 30 59 0 0 chr17 18891761 18891812 -70612741 + AT_rich Low_complexity Low_complexity 1 51 0 2162 171 44 26 chr17 18893040 18893537 -70611016 - L1MB5 LINE L1 -124 6050 5545 377 262 58 0 chr17 18893547 18893650 -70610903 - MIR SINE MIR -107 155 47 250 333 174 0 chr17 18895236 18895374 -70609179 + MIR SINE MIR 96 257 -5 193 321 71 9 chr17 18895763 18895875 -70608678 + MIR3 SINE MIR 87 205 -3 288 326 11 21 chr17 18896741 18896836 -70607717 + MIR SINE MIR 9 102 -160 1086 230 20 8 chr17 18896836 18897084 -70607469 - Tigger3(Golem) DNA MER2_type -1 3028 2778 317 358 32 0 chr17 18897124 18897247 -70607306 + MIR SINE MIR 102 228 -34 4642 105 24 6 chr17 18897379 18898053 -70606500 - L1PA13 LINE L1 0 6163 5478 2473 74 0 0 chr17 18898065 18898374 -70606179 - AluY SINE Alu -2 309 1 260 244 0 8 chr17 18901110 18901240 -70603313 + CT-rich Low_complexity Low_complexity 1 128 0 275 324 88 15 chr17 18901662 18901798 -70602755 - MIR3 SINE MIR -45 163 18 187 387 28 9 chr17 18903081 18903187 -70601366 + MIR SINE MIR 84 191 -71 221 325 0 0 chr17 18906144 18906224 -70598329 + (TG)n Simple_repeat Simple_repeat 1 80 0 1940 156 99 3 chr17 18906246 18906579 -70597974 - MLT1A1 LTR MaLR 0 365 1 315 0 0 0 chr17 18907028 18907063 -70597490 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1771 132 0 0 chr17 18908012 18908255 -70596298 + AluSx SINE Alu 1 243 -69 294 308 79 26 chr17 18910437 18910643 -70593910 - MIR SINE MIR -21 241 24 212 267 67 13 chr17 18913976 18914051 -70590502 + MIR SINE MIR 40 118 -90 2368 68 0 0 chr17 18915175 18915468 -70589085 + AluSc SINE Alu 1 293 -16 335 333 56 28 chr17 18918538 18918718 -70585835 + L1ME LINE L1 5592 5776 -345 397 227 52 10 chr17 18918877 18918974 -70585579 + Charlie1 DNA MER1_type 14 114 -2647 3379 202 128 60 chr17 18918978 18919813 -70584740 + Charlie1 DNA MER1_type 1425 2375 -386 2230 99 3 0 chr17 18919813 18920106 -70584447 + AluSx SINE Alu 3 296 -16 3379 202 128 60 chr17 18920106 18920522 -70584031 + Charlie1 DNA MER1_type 2375 2761 0 198 0 0 0 chr17 18921297 18921319 -70583234 + (A)n Simple_repeat Simple_repeat 1 22 0 563 270 144 43 chr17 18921381 18921446 -70583107 - MER77 LTR ERV1 -5 600 543 1546 190 60 3 chr17 18921446 18921609 -70582944 - AluJo SINE Alu -12 300 113 348 24 0 0 chr17 18921609 18921650 -70582903 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1546 190 60 3 chr17 18921650 18921770 -70582783 - AluJo SINE Alu -199 113 1 563 270 144 43 chr17 18921770 18922077 -70582476 - MER77 LTR ERV1 -62 543 303 419 253 27 47 chr17 18922235 18922385 -70582168 - MER77 LTR ERV1 -405 200 54 200 246 188 0 chr17 18924263 18924332 -70580221 + L2 LINE L2 2565 2646 -668 2092 114 31 0 chr17 18925804 18926094 -70578459 - AluSx SINE Alu -13 299 1 2265 81 24 0 chr17 18928103 18928398 -70576155 + AluSp SINE Alu 1 302 -11 199 217 22 0 chr17 18929640 18929686 -70574867 - L2 LINE L2 -90 3182 3136 256 269 67 10 chr17 18930417 18930521 -70574032 - Tigger8 DNA MER2_type -325 341 232 2246 95 3 0 chr17 18930630 18930925 -70573628 + AluSc SINE Alu 1 296 -13 286 303 18 18 chr17 18932255 18932364 -70572189 - MIR SINE MIR -105 157 49 212 319 195 26 chr17 18932534 18932647 -70571906 - L2 LINE L2 -31 3282 3151 248 371 93 7 chr17 18932699 18932850 -70571703 + MIR3 SINE MIR 22 185 -23 1247 126 135 0 chr17 18933241 18933448 -70571105 + MER46A DNA MER2_type 2 236 0 741 126 0 0 chr17 18940626 18940729 -70563824 + U6 snRNA snRNA 1 103 -4 33 0 0 0 chr17 18940729 18940762 -70563791 + AT_rich Low_complexity Low_complexity 1 33 0 1713 78 5 0 chr17 18945100 18945318 -70559235 + AluY SINE Alu 3 221 -90 238 71 0 0 chr17 18945318 18945360 -70559193 + AluY SINE Alu 256 297 -2 1914 138 20 7 chr17 18948469 18948766 -70555787 - AluJb SINE Alu -11 301 1 1661 161 3 47 chr17 18948970 18949177 -70555376 + 7SLRNA srpRNA srpRNA 24 216 -104 1885 157 3 13 chr17 18949177 18949483 -70555070 + AluJb SINE Alu 1 303 -9 1661 161 3 47 chr17 18949483 18949573 -70554980 + 7SLRNA srpRNA srpRNA 216 308 -12 1057 75 0 0 chr17 18949577 18949710 -70554843 + AluSg SINE Alu 1 133 -177 2084 87 4 11 chr17 18949710 18949987 -70554566 + AluSg SINE Alu 1 275 -35 2455 40 0 3 chr17 18953744 18954041 -70550512 - AluY SINE Alu -15 296 1 219 69 0 0 chr17 18955266 18955295 -70549258 + (TCCGG)n Simple_repeat Simple_repeat 5 33 0 183 205 0 0 chr17 18955504 18955543 -70549010 + (TTA)n Simple_repeat Simple_repeat 1 39 0 240 122 0 0 chr17 18956099 18956140 -70548413 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 184 284 114 34 chr17 18956772 18956860 -70547693 - L2 LINE L2 -1847 1467 1373 892 141 0 0 chr17 18957119 18957247 -70547306 + AluJb SINE Alu 158 285 -27 252 309 122 6 chr17 18960017 18960198 -70544355 + L1MC5 LINE L1 7268 7469 -492 1724 94 0 0 chr17 18960434 18960647 -70543906 + AluSq SINE Alu 1 213 -100 2381 102 3 0 chr17 18961468 18961772 -70542781 - AluSx SINE Alu -7 305 1 299 297 129 0 chr17 18961784 18961939 -70542614 + MLT1I LTR MaLR 228 402 -7 2159 122 3 10 chr17 18962905 18963216 -70541337 - AluSx SINE Alu -3 309 1 1695 174 29 29 chr17 18963683 18963813 -70540740 + AluJo SINE Alu 1 130 -182 2050 132 7 7 chr17 18963813 18964108 -70540445 + AluSg SINE Alu 5 299 -11 1695 174 29 29 chr17 18964108 18964288 -70540265 + AluJo SINE Alu 129 311 -1 349 317 43 12 chr17 18964908 18965072 -70539481 - MIR SINE MIR -5 257 89 2153 104 11 0 chr17 18965810 18966118 -70538435 + AluSq SINE Alu 1 311 0 312 357 61 8 chr17 18967175 18967438 -70537115 - L2 LINE L2 -459 2855 2579 880 224 24 9 chr17 18967724 18967934 -70536619 + L1MB3 LINE L1 5795 6007 -176 584 203 0 8 chr17 18967937 18968060 -70536493 + L1MB3 LINE L1 6054 6175 -8 241 172 86 0 chr17 18968542 18968600 -70535953 - MER3 DNA MER1_type -3 206 144 2016 119 4 0 chr17 18968644 18968913 -70535640 + AluSx SINE Alu 21 290 -22 203 61 30 0 chr17 18968916 18968949 -70535604 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1146 195 0 108 chr17 18968955 18969288 -70535265 + AluJb SINE Alu 2 298 -4 2138 119 7 10 chr17 18969290 18969584 -70534969 + AluSx SINE Alu 1 293 -19 935 123 0 36 chr17 18971552 18971690 -70532863 + AluJo SINE Alu 7 139 -173 2472 76 0 7 chr17 18971691 18971995 -70532558 + AluY SINE Alu 1 302 -9 2412 113 3 0 chr17 18972083 18972394 -70532159 - AluSq SINE Alu -1 312 1 2224 124 0 9 chr17 18972571 18972886 -70531667 - AluSx SINE Alu 0 312 1 1335 132 5 0 chr17 18972934 18973123 -70531430 + AluSx SINE Alu 2 191 -121 608 51 0 0 chr17 18973123 18973201 -70531352 + AluSg SINE Alu 57 134 -176 2436 70 7 3 chr17 18973201 18973501 -70531052 + AluY SINE Alu 1 301 -10 1350 156 3 122 chr17 18973501 18973848 -70530705 + AluJb SINE Alu 1 310 0 2321 57 3 27 chr17 18976194 18976494 -70528059 - AluSq SINE Alu -20 293 1 2300 71 7 17 chr17 18976808 18977105 -70527448 + AluSc SINE Alu 1 294 -15 631 60 0 0 chr17 18977321 18977426 -70527127 - AluSg/x SINE Alu 0 300 196 2202 90 38 0 chr17 18978656 18978945 -70525608 - AluSg SINE Alu -10 300 1 2250 85 54 0 chr17 18978962 18979257 -70525296 - AluY SINE Alu 0 311 1 2024 127 0 14 chr17 18979845 18980162 -70524391 - AluY SINE Alu 0 313 1 1129 139 57 53 chr17 18980162 18980371 -70524182 + THE1B LTR MaLR 155 364 0 2509 70 0 3 chr17 18981311 18981609 -70522944 + AluY SINE Alu 1 297 -14 377 252 30 23 chr17 18982270 18982289 -70522264 - LTR50 LTR ERVL -124 671 654 1952 138 10 3 chr17 18982289 18982580 -70521973 + AluSx SINE Alu 1 293 -19 377 252 30 23 chr17 18982580 18982691 -70521862 - LTR50 LTR ERVL -141 654 540 251 227 76 0 chr17 18982879 18982945 -70521608 - LTR50 LTR ERVL -700 95 25 255 237 0 140 chr17 18983383 18983430 -70521123 + MER58A DNA MER1_type 5 34 -307 2444 92 7 0 chr17 18983430 18983734 -70520819 - AluSq SINE Alu -7 306 1 255 237 0 140 chr17 18983734 18983779 -70520774 + MER58A DNA MER1_type 34 84 -140 2147 116 13 3 chr17 18983855 18984157 -70520396 - AluSq SINE Alu -8 305 1 1158 170 50 9 chr17 18984519 18984737 -70519816 + AluJb SINE Alu 78 304 -8 22 0 0 0 chr17 18984793 18984815 -70519738 + AT_rich Low_complexity Low_complexity 1 22 0 703 115 31 46 chr17 18984842 18984972 -70519581 - FLAM_C SINE Alu -2 131 4 691 224 152 19 chr17 18985999 18986263 -70518290 - MER46C DNA MER2_type -1 337 39 2134 114 3 14 chr17 18986670 18986967 -70517586 - AluSx SINE Alu -18 294 1 644 182 16 0 chr17 18986996 18987117 -70517436 - AluSg/x SINE Alu -1 311 189 319 305 38 19 chr17 18987534 18987625 -70516928 - L2 LINE L2 -14 3299 3211 1548 131 40 44 chr17 18987625 18987667 -70516886 - L1MB5 LINE L1 0 6174 6133 243 0 0 0 chr17 18987667 18987694 -70516859 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2091 113 7 14 chr17 18987694 18987841 -70516712 - AluSx SINE Alu -30 282 136 2386 100 3 0 chr17 18987841 18988142 -70516411 - AluSp SINE Alu -11 302 1 2091 113 7 14 chr17 18988142 18988278 -70516275 - AluSx SINE Alu -176 136 1 1548 131 40 44 chr17 18988278 18988555 -70515998 - L1MB5 LINE L1 -39 6135 5855 319 305 38 19 chr17 18988555 18988568 -70515985 - L2 LINE L2 -102 3211 3193 1522 124 0 5 chr17 18988605 18988822 -70515731 - AluSg/x SINE Alu -12 300 85 1007 226 107 76 chr17 18989282 18989342 -70515211 + L1ME3A LINE L1 5700 5757 -413 2329 96 0 13 chr17 18989342 18989644 -70514909 - AluY SINE Alu -13 298 1 2217 98 24 10 chr17 18989646 18989941 -70514612 - AluSq SINE Alu -14 299 1 1007 226 107 76 chr17 18989941 18990154 -70514399 + L1ME3A LINE L1 5757 5998 -172 2380 51 58 0 chr17 18990154 18990430 -70514123 + AluY SINE Alu 1 292 -19 1007 226 107 76 chr17 18990430 18990599 -70513954 + L1ME3A LINE L1 5998 6160 -10 298 208 14 0 chr17 18990646 18990718 -70513835 - MER20 DNA MER1_type -1 218 146 921 179 45 6 chr17 18990782 18990961 -70513592 - MER20 DNA MER1_type -33 186 1 1621 194 0 14 chr17 18991290 18991574 -70512979 + AluJo SINE Alu 1 280 -32 216 0 0 0 chr17 18991574 18991598 -70512955 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 1075 131 0 0 chr17 18992213 18992366 -70512187 + AluSg/x SINE Alu 153 305 -5 1732 169 20 17 chr17 18992375 18992671 -70511882 + AluJb SINE Alu 1 297 -15 2416 91 7 3 chr17 18992880 18993189 -70511364 + AluSg SINE Alu 1 310 0 2259 117 3 7 chr17 18993371 18993680 -70510873 + AluSc SINE Alu 1 308 -1 1226 114 0 45 chr17 18993680 18993856 -70510697 + AluSg/x SINE Alu 132 299 -11 1957 145 3 0 chr17 18993918 18994250 -70510303 + AluSx SINE Alu 1 333 0 2382 86 0 32 chr17 18994256 18994570 -70509983 + AluY SINE Alu 1 304 -7 22 0 0 0 chr17 18994612 18994634 -70509919 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr17 18994697 18994739 -70509814 + AT_rich Low_complexity Low_complexity 1 42 0 1529 184 57 21 chr17 18994977 18995259 -70509294 - AluJo SINE Alu -20 292 1 271 220 0 0 chr17 18995399 18995449 -70509104 + AluJo SINE Alu 85 134 -168 2332 115 0 0 chr17 18995450 18995754 -70508799 + AluSx SINE Alu 1 304 -8 2718 51 0 0 chr17 18995884 18996195 -70508358 + AluY SINE Alu 1 311 0 227 207 35 17 chr17 18996574 18996632 -70507921 + MLT1J LTR MaLR 341 399 -112 1291 117 0 0 chr17 18996677 18996840 -70507713 - AluSg/x SINE Alu -22 288 126 1917 163 3 0 chr17 18997981 18998282 -70506271 + AluJb SINE Alu 1 302 -10 2258 115 6 6 chr17 18998891 18999203 -70505350 + AluSp SINE Alu 1 312 -1 2268 103 0 10 chr17 18999614 18999951 -70504602 + AluSc SINE Alu 1 309 0 769 165 0 0 chr17 18999951 19000084 -70504469 + FLAM_C SINE Alu 1 133 0 1658 148 0 123 chr17 19000626 19000821 -70503732 - AluJo SINE Alu -4 308 173 2490 65 0 3 chr17 19000821 19001114 -70503439 + AluY SINE Alu 1 292 -19 1658 148 0 123 chr17 19001114 19001269 -70503284 - AluJo SINE Alu -139 173 1 1943 117 26 39 chr17 19001271 19001380 -70503173 - AluSq SINE Alu -10 303 194 2490 75 0 0 chr17 19001380 19001674 -70502879 + AluY SINE Alu 1 294 -17 1943 117 26 39 chr17 19001674 19001871 -70502682 - AluSq SINE Alu -119 194 1 2586 76 0 0 chr17 19001878 19002182 -70502371 - AluSp SINE Alu -7 306 3 218 336 44 26 chr17 19002848 19002961 -70501592 - MIR3 SINE MIR -43 165 51 942 175 113 5 chr17 19003505 19003699 -70500854 - MER46A DNA MER2_type -8 228 14 2321 102 3 0 chr17 19003774 19004068 -70500485 - AluSx SINE Alu -15 297 3 2251 102 0 3 chr17 19004493 19004803 -70499750 + AluSc SINE Alu 2 310 0 1950 157 0 22 chr17 19004996 19005135 -70499418 + AluSx SINE Alu 1 142 -170 2103 94 0 0 chr17 19005135 19005400 -70499153 + AluSx SINE Alu 40 304 -8 1950 157 0 22 chr17 19005400 19005572 -70498981 + AluSx SINE Alu 142 305 -7 840 236 50 117 chr17 19005603 19005828 -70498725 + L1MC4 LINE L1 7573 7747 -295 2187 95 7 7 chr17 19005828 19006122 -70498431 + AluSx SINE Alu 1 294 -18 840 236 50 117 chr17 19006122 19006400 -70498153 + L1MC4 LINE L1 7747 8042 0 1921 150 17 10 chr17 19007101 19007401 -70497152 + AluJo SINE Alu 1 302 -10 2006 85 27 30 chr17 19007490 19007785 -70496768 + AluSp SINE Alu 1 294 -19 314 155 60 0 chr17 19007787 19007903 -70496650 + (TA)n Simple_repeat Simple_repeat 1 123 0 902 121 0 57 chr17 19007957 19008098 -70496455 + AluSg SINE Alu 1 133 -177 2247 106 3 0 chr17 19008098 19008390 -70496163 + AluSx SINE Alu 1 293 -19 1696 204 21 0 chr17 19008583 19008872 -70495681 + AluJo SINE Alu 1 295 -17 1882 77 0 49 chr17 19009637 19009776 -70494777 - AluSq SINE Alu -40 273 154 2063 78 39 0 chr17 19009776 19010060 -70494493 - AluSx SINE Alu -17 295 1 1882 77 0 49 chr17 19010060 19010207 -70494346 - AluSq SINE Alu -159 154 1 413 256 120 8 chr17 19010344 19010477 -70494076 + MIR SINE MIR 104 251 -11 199 282 14 28 chr17 19010521 19010592 -70493961 + MIR SINE MIR 81 150 -58 2343 81 3 0 chr17 19011016 19011323 -70493230 + AluSx SINE Alu 1 308 -4 1891 119 0 56 chr17 19012024 19012326 -70492227 - AluSx SINE Alu -15 297 13 609 136 0 0 chr17 19012328 19012416 -70492137 - AluS SINE Alu -224 88 1 1956 128 3 10 chr17 19012470 19012774 -70491779 + AluJo SINE Alu 1 302 -10 208 357 141 17 chr17 19013068 19013363 -70491190 - L2 LINE L2 -359 2955 2606 1705 109 4 16 chr17 19013363 19013619 -70490934 + AluSg SINE Alu 44 296 -14 208 357 141 17 chr17 19013619 19013684 -70490869 - L2 LINE L2 -708 2606 2550 1334 145 0 23 chr17 19013872 19014093 -70490460 - AluSg/x SINE Alu -15 297 82 1260 55 109 11 chr17 19014093 19014276 -70490277 - AluY SINE Alu -17 294 94 2009 109 3 23 chr17 19016062 19016386 -70488167 + AluSx SINE Alu 2 312 0 521 244 87 23 chr17 19018184 19018356 -70486197 + MER53 DNA DNA 3 185 -4 21 0 0 0 chr17 19020554 19020575 -70483978 + GC_rich Low_complexity Low_complexity 1 21 0 333 158 33 87 chr17 19020782 19020966 -70483587 + (CACGT)n Simple_repeat Simple_repeat 4 177 0 1028 186 48 8 chr17 19021681 19021929 -70482624 + L1MD3 LINE L1 7736 7993 -2 * 1036 218 128 26 chr17 19021917 19022125 -70482428 + L1ME1 LINE L1 5585 5770 -396 1596 165 7 45 chr17 19022125 19022434 -70482119 + AluSx SINE Alu 1 297 -15 1036 218 128 26 chr17 19022434 19022674 -70481879 + L1ME1 LINE L1 5770 6098 -68 261 230 156 22 chr17 19022589 19022724 -70481829 + L1MA10 LINE L1 6168 6320 -14 * 2272 78 0 0 chr17 19022725 19023021 -70481532 - AluSg1 SINE Alu -13 296 1 2124 99 3 20 chr17 19023021 19023324 -70481229 - AluY SINE Alu -12 299 2 329 235 34 67 chr17 19023348 19023467 -70481086 + MIR3 SINE MIR 42 156 -52 990 117 7 0 chr17 19023646 19023791 -70480762 - L1MA3 LINE L1 0 6305 6160 237 83 0 0 chr17 19023792 19023828 -70480725 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2195 67 0 11 chr17 19023828 19024112 -70480441 - AluY SINE Alu -30 281 1 2012 104 45 0 chr17 19024115 19024404 -70480149 - AluSx SINE Alu -10 302 1 2031 110 3 10 chr17 19024405 19024713 -70479840 - AluSq SINE Alu -7 306 1 245 182 23 57 chr17 19024714 19024802 -70479751 + L1MA9 LINE L1 6209 6293 -19 1537 75 5 28 chr17 19024845 19025057 -70479496 - AluJb SINE Alu -105 207 1 2014 102 13 13 chr17 19025349 19025652 -70478901 + AluSg SINE Alu 1 303 -7 1461 219 0 0 chr17 19026246 19026543 -70478010 - AluY SINE Alu -14 297 1 2271 92 0 3 chr17 19028026 19028330 -70476223 - AluY SINE Alu -8 303 1 1951 93 36 4 chr17 19031622 19031902 -70472651 - AluY SINE Alu -22 289 1 1726 177 3 0 chr17 19031902 19032196 -70472357 - AluJo SINE Alu -3 309 15 2023 103 45 3 chr17 19032238 19032407 -70472146 - AluSx SINE Alu -9 303 116 243 0 0 0 chr17 19032407 19032434 -70472119 + (TG)n Simple_repeat Simple_repeat 2 28 0 2023 103 45 3 chr17 19032434 19032555 -70471998 - AluSx SINE Alu -196 116 1 262 269 125 0 chr17 19032642 19032746 -70471807 + Charlie2 DNA MER1_type 237 353 -2509 236 252 204 14 chr17 19032819 19032966 -70471587 + MER112 DNA MER1_type 38 212 -48 1980 138 0 3 chr17 19032992 19033290 -70471263 + AluSx SINE Alu 1 297 -15 1146 226 0 25 chr17 19033290 19033564 -70470989 + L1M4 LINE L1 4766 5032 -1114 623 126 0 21 chr17 19033580 19033675 -70470878 + AluS SINE Alu 5 97 -215 2016 104 17 0 chr17 19033997 19034285 -70470268 + AluSq SINE Alu 1 293 -20 2265 100 6 0 chr17 19035814 19036125 -70468428 + AluSq SINE Alu 1 313 0 390 270 61 17 chr17 19037058 19037173 -70467380 - MIR SINE MIR -50 212 93 297 242 44 81 chr17 19039191 19039340 -70465213 - L1MC4 LINE L1 -207 7675 7458 2004 86 16 23 chr17 19039910 19040213 -70464340 - AluSg SINE Alu -9 301 1 1914 82 0 32 chr17 19041098 19041377 -70463176 - AluSg SINE Alu 0 310 41 709 186 0 131 chr17 19041379 19041600 -70462953 - L1PA16 LINE L1 -11 6155 5964 1640 148 7 11 chr17 19041600 19041883 -70462670 - AluJo SINE Alu -18 294 13 267 286 57 29 chr17 19041883 19041988 -70462565 - MIR SINE MIR -33 229 122 248 311 114 21 chr17 19043192 19043385 -70461168 + L1MC5 LINE L1 7259 7469 -492 1453 100 0 19 chr17 19043629 19043839 -70460714 + AluSq SINE Alu 5 210 -103 2145 101 3 10 chr17 19044667 19044974 -70459579 - AluSx SINE Alu -7 305 1 320 297 128 0 chr17 19044987 19045135 -70459418 + MLT1I LTR MaLR 228 394 -15 1848 130 0 43 chr17 19046123 19046446 -70458107 - AluSx SINE Alu -3 309 1 1483 171 29 41 chr17 19046919 19047052 -70457501 + AluJo SINE Alu 1 134 -178 1666 151 0 33 chr17 19047052 19047357 -70457196 + AluSg SINE Alu 5 299 -11 1483 171 29 41 chr17 19047357 19047538 -70457015 + AluJo SINE Alu 134 311 -1 379 329 37 6 chr17 19048160 19048324 -70456229 - MIR SINE MIR -5 257 89 1899 100 11 7 chr17 19049093 19049394 -70455159 + AluSq SINE Alu 11 312 0 364 347 57 11 chr17 19050466 19050731 -70453822 - L2 LINE L2 -459 2855 2579 928 221 14 14 chr17 19051021 19051234 -70453319 + L1MB3 LINE L1 5795 6007 -176 660 203 0 8 chr17 19051237 19051360 -70453193 + L1MB3 LINE L1 6054 6175 -8 239 172 86 0 chr17 19051846 19051904 -70452649 - MER3 DNA MER1_type -3 206 144 1965 128 3 0 chr17 19051948 19052238 -70452315 + AluSx SINE Alu 21 311 -1 1235 195 0 111 chr17 19052260 19052594 -70451959 + AluJb SINE Alu 2 298 -4 1942 121 7 17 chr17 19052596 19052893 -70451660 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr17 19052895 19052916 -70451637 + AT_rich Low_complexity Low_complexity 1 21 0 1089 177 4 65 chr17 19054879 19055030 -70449523 + AluJb SINE Alu 7 141 -171 2165 87 0 10 chr17 19055030 19055329 -70449224 + AluY SINE Alu 10 305 -6 1089 177 4 65 chr17 19055329 19055409 -70449144 + AluJb SINE Alu 141 224 -88 2112 99 3 13 chr17 19055419 19055723 -70448830 - AluSq SINE Alu -1 312 12 180 97 0 0 chr17 19055911 19055942 -70448611 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1561 152 0 22 chr17 19055952 19056222 -70448331 - AluSx SINE Alu -38 274 11 1786 129 0 23 chr17 19056508 19056810 -70447743 + AluSg SINE Alu 1 295 -15 3959 180 61 25 chr17 19056810 19057095 -70447458 + L1MB7 LINE L1 4766 5039 -1145 1907 119 39 3 chr17 19057095 19057380 -70447173 + AluSx SINE Alu 1 295 -17 3959 180 61 25 chr17 19057380 19057577 -70446976 + L1MB7 LINE L1 5039 5228 -956 1392 150 82 75 chr17 19057577 19057871 -70446682 - AluJo SINE Alu -16 296 1 3959 180 61 25 chr17 19057871 19058766 -70445787 + L1MB7 LINE L1 5228 6184 0 2476 58 0 6 chr17 19059116 19059427 -70445126 - AluY SINE Alu -2 309 1 2237 94 0 0 chr17 19059893 19060190 -70444363 + AluSg SINE Alu 1 297 -13 1812 125 0 39 chr17 19060220 19060532 -70444021 + AluSp SINE Alu 1 300 -13 2238 102 0 3 chr17 19111838 19112148 -70392405 + AluSc SINE Alu 2 310 0 1944 157 0 22 chr17 19112341 19112480 -70392073 + AluSx SINE Alu 1 142 -170 2092 94 0 0 chr17 19112480 19112745 -70391808 + AluSx SINE Alu 40 304 -8 1944 157 0 22 chr17 19112745 19112917 -70391636 + AluSx SINE Alu 142 305 -7 263 247 49 0 chr17 19112948 19113029 -70391524 + L1MC4 LINE L1 7573 7657 -385 2171 95 7 7 chr17 19113173 19113467 -70391086 + AluSx SINE Alu 1 294 -18 810 241 48 19 chr17 19113475 19113745 -70390808 + L1MC4 LINE L1 7765 8042 0 1912 150 17 10 chr17 19114447 19114747 -70389806 + AluJo SINE Alu 1 302 -10 2166 72 28 21 chr17 19114836 19115127 -70389426 + AluSp SINE Alu 1 293 -20 345 157 52 0 chr17 19115129 19115244 -70389309 + (TA)n Simple_repeat Simple_repeat 2 122 0 900 121 0 57 chr17 19115298 19115439 -70389114 + AluSg SINE Alu 1 133 -177 2233 106 3 0 chr17 19115439 19115731 -70388822 + AluSx SINE Alu 1 293 -19 1700 204 21 0 chr17 19115924 19116213 -70388340 + AluJo SINE Alu 1 295 -17 703 184 201 6 chr17 19116539 19116713 -70387840 - MER3 DNA MER1_type -1 208 1 1505 156 118 15 chr17 19116762 19116867 -70387686 + AluJo SINE Alu 2 95 -217 1844 178 0 13 chr17 19116867 19117165 -70387388 + AluJb SINE Alu 1 294 -18 1505 156 118 15 chr17 19117165 19117322 -70387231 + AluJo SINE Alu 95 291 -21 2326 106 0 7 chr17 19117720 19118021 -70386532 - AluSg SINE Alu -11 299 1 2028 123 20 0 chr17 19118393 19118685 -70385868 - AluSx SINE Alu -14 298 1 586 78 26 0 chr17 19118696 19118773 -70385780 - AluSg/x SINE Alu -18 292 214 28 0 0 0 chr17 19118927 19118955 -70385598 + AT_rich Low_complexity Low_complexity 1 28 0 2301 100 7 3 chr17 19118960 19119270 -70385283 + AluY SINE Alu 1 311 0 280 322 33 22 chr17 19119568 19119691 -70384862 - MIR SINE MIR -59 149 32 238 336 164 17 chr17 19119764 19119871 -70384682 + L2 LINE L2 2501 2591 -723 1815 106 4 16 chr17 19119871 19120125 -70384428 - AluSg SINE Alu -16 294 44 238 336 164 17 chr17 19120125 19120433 -70384120 + L2 LINE L2 2591 2977 -337 2049 132 3 10 chr17 19120714 19121018 -70383535 - AluJo SINE Alu -10 302 1 618 136 0 0 chr17 19121072 19121160 -70383393 + AluS SINE Alu 1 88 -225 2002 109 0 63 chr17 19121162 19121464 -70383089 + AluSg SINE Alu 13 295 -15 2468 81 3 0 chr17 19122165 19122472 -70382081 - AluSx SINE Alu -4 308 1 192 306 41 0 chr17 19122609 19122658 -70381895 - MIR SINE MIR -67 141 91 214 282 14 28 chr17 19122896 19122967 -70381586 - MIR SINE MIR -58 150 81 441 256 120 8 chr17 19123011 19123144 -70381409 - MIR SINE MIR -11 251 104 1996 77 0 49 chr17 19123281 19123428 -70381125 + AluSq SINE Alu 1 129 -184 2178 78 39 0 chr17 19123428 19123712 -70380841 + AluSx SINE Alu 1 295 -17 1996 77 0 49 chr17 19123712 19123851 -70380702 + AluSq SINE Alu 129 273 -40 551 259 17 2 chr17 19124914 19125098 -70379455 + MIR SINE MIR 29 256 -6 3063 126 64 42 chr17 19125297 19125893 -70378660 + MER4B LTR ERV1 1 609 -1 214 307 69 30 chr17 19125909 19126010 -70378543 + L2 LINE L2 3149 3253 -19 526 286 131 56 chr17 19126028 19126109 -70378444 - L2 LINE L2 -5 3267 3193 1822 151 3 11 chr17 19126109 19126418 -70378135 + AluSx SINE Alu 1 307 0 526 286 131 56 chr17 19126418 19126856 -70377697 - L2 LINE L2 -79 3193 2701 2086 138 3 0 chr17 19126857 19127162 -70377391 + AluSg SINE Alu 1 306 -4 1383 167 0 14 chr17 19127301 19127516 -70377037 + AluJo SINE Alu 71 282 -30 535 273 0 8 chr17 19127861 19127982 -70376571 + MER5A DNA MER1_type 1 120 -69 1155 157 0 6 chr17 19127999 19128171 -70376382 + AluSg/x SINE Alu 125 295 -17 270 224 45 0 chr17 19128172 19128239 -70376314 + MER5A DNA MER1_type 115 184 -5 2617 61 0 0 chr17 19128398 19128708 -70375845 - AluY SINE Alu -1 310 1 2213 116 7 0 chr17 19128708 19129002 -70375551 - AluSx SINE Alu -16 296 1 2353 83 0 17 chr17 19129013 19129314 -70375239 - AluY SINE Alu -15 296 1 813 279 188 15 chr17 19129434 19129832 -70374721 - L2 LINE L2 -1 3312 2846 2163 112 0 14 chr17 19130029 19130337 -70374216 - AluSx SINE Alu 0 304 1 2658 45 0 10 chr17 19130339 19130652 -70373901 - AluY SINE Alu -1 310 1 1064 133 0 0 chr17 19130652 19130795 -70373758 - AluSq/x SINE Alu -169 143 1 356 286 0 0 chr17 19130900 19130998 -70373555 + MLT1I LTR MaLR 81 178 -231 182 162 54 0 chr17 19131096 19131170 -70373383 + (TA)n Simple_repeat Simple_repeat 1 78 0 1027 247 53 40 chr17 19131176 19131535 -70373018 - MLT1E LTR MaLR -24 569 193 216 213 0 0 chr17 19131541 19131602 -70372951 + G-rich Low_complexity Low_complexity 5 65 0 436 293 21 4 chr17 19131603 19131776 -70372777 - MLT1E LTR MaLR -372 195 17 2179 103 0 39 chr17 19131793 19132103 -70372450 - AluSc SINE Alu -1 308 11 2159 79 4 4 chr17 19132113 19132380 -70372173 - AluSp SINE Alu -33 280 14 805 107 0 0 chr17 19132386 19132489 -70372064 - AluSg/x SINE Alu -18 294 192 355 158 134 0 chr17 19132518 19132600 -70371953 + MLT1I LTR MaLR 317 409 0 425 266 16 11 chr17 19132604 19132723 -70371830 - MIR SINE MIR -80 128 27 189 74 0 0 chr17 19132726 19132753 -70371800 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 686 212 0 40 chr17 19132754 19132905 -70371648 - FRAM SINE Alu -31 145 1 332 231 67 10 chr17 19133252 19133356 -70371197 - MIR3 SINE MIR -42 166 57 2230 111 14 0 chr17 19133548 19133845 -70370708 - AluSg SINE Alu -9 301 1 300 274 32 11 chr17 19133939 19134034 -70370519 - MLT1K LTR MaLR 0 588 492 1274 178 108 37 chr17 19134139 19134438 -70370115 - AluJo SINE Alu 0 318 1 1923 107 7 11 chr17 19134460 19134732 -70369821 - AluSx SINE Alu -7 305 35 635 238 29 79 chr17 19134758 19135098 -70369455 - L1ME2 LINE L1 -1 6232 5910 1002 162 6 35 chr17 19135111 19135284 -70369269 - FRAM SINE Alu -6 170 3 2243 89 0 67 chr17 19135288 19135615 -70368938 - AluSg SINE Alu -5 305 1 2195 120 0 3 chr17 19135619 19135910 -70368643 - AluSx SINE Alu -22 290 1 2222 196 20 32 chr17 19135915 19136133 -70368420 - L1ME2 LINE L1 -347 5888 5669 2541 88 0 0 chr17 19136133 19136440 -70368113 - AluY SINE Alu -4 307 1 2222 196 20 32 chr17 19136440 19136717 -70367836 - L1ME2 LINE L1 -566 5669 5399 23 0 0 0 chr17 19136767 19136790 -70367763 + AT_rich Low_complexity Low_complexity 1 23 0 2079 115 3 3 chr17 19136790 19137078 -70367475 - AluSx SINE Alu -24 288 1 1576 238 22 24 chr17 19137098 19137497 -70367056 - L1ME2 LINE L1 -3192 3023 2624 2139 122 3 10 chr17 19137497 19137792 -70366761 - AluSx SINE Alu -19 293 1 1576 238 22 24 chr17 19137792 19137851 -70366702 - L1ME2 LINE L1 -3591 2624 2566 262 212 256 15 chr17 19137988 19138125 -70366428 - L1MB8 LINE L1 -21 6157 5988 1121 153 118 25 chr17 19138126 19138138 -70366415 - AluJb SINE Alu -4 308 299 2556 77 0 0 chr17 19138138 19138448 -70366105 - AluY SINE Alu -1 310 1 1121 153 118 25 chr17 19138448 19138638 -70365915 - AluJb SINE Alu -13 299 87 1249 207 43 7 chr17 19138639 19138919 -70365634 - L1MB7 LINE L1 -165 6019 5730 1248 154 0 62 chr17 19138920 19139101 -70365452 - AluJo SINE Alu -3 309 118 2382 67 14 14 chr17 19139101 19139398 -70365155 - AluY SINE Alu -12 299 3 2320 105 3 6 chr17 19139404 19139717 -70364836 - AluSx SINE Alu 0 312 1 1248 154 0 62 chr17 19139717 19139755 -70364798 - AluJo SINE Alu -199 113 97 3131 224 51 46 chr17 19139757 19140920 -70363633 - L1M4 LINE L1 -2451 3695 2528 939 219 31 25 chr17 19140933 19141091 -70363462 - AluJo SINE Alu -31 281 125 2103 120 23 16 chr17 19141091 19141400 -70363153 - AluSx SINE Alu -1 311 1 198 0 0 0 chr17 19141403 19141425 -70363128 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 939 219 31 25 chr17 19141425 19141458 -70363095 - AluJo SINE Alu -188 124 85 3695 150 32 14 chr17 19141461 19142176 -70362377 - L1MB3 LINE L1 -133 6050 5323 2326 105 0 0 chr17 19142176 19142470 -70362083 - AluSx SINE Alu -18 294 1 274 238 14 77 chr17 19142493 19142528 -70362025 - L1ME2 LINE L1 -4857 1539 1503 2519 70 0 0 chr17 19142528 19142829 -70361724 - AluY SINE Alu -10 301 1 274 238 14 77 chr17 19142829 19142936 -70361617 - L1ME2 LINE L1 -4893 1503 1406 24 0 0 0 chr17 19142951 19142975 -70361578 + AT_rich Low_complexity Low_complexity 1 24 0 2223 87 3 24 chr17 19142979 19143298 -70361255 + AluSp SINE Alu 3 315 0 1639 207 65 2 chr17 19143298 19143496 -70361057 + L1M4 LINE L1 4404 4588 -1558 405 0 0 0 chr17 19143496 19143541 -70361012 + (TG)n Simple_repeat Simple_repeat 2 46 0 1639 207 65 2 chr17 19143541 19143757 -70360796 + L1M4 LINE L1 4588 4844 -1302 2398 55 7 0 chr17 19143769 19144059 -70360494 - AluSp SINE Alu -21 292 1 4446 161 118 27 chr17 19144105 19145073 -70359480 + MER52A LTR ERV1 217 1233 -522 1105 58 0 36 chr17 19145073 19145212 -70359341 + AluSq/x SINE Alu 1 134 -179 2311 91 13 0 chr17 19145213 19145511 -70359042 + AluSq SINE Alu 1 302 -11 2305 133 40 3 chr17 19145514 19145889 -70358664 + L1PA15 LINE L1 5771 6159 -6 1537 142 83 31 chr17 19145889 19146177 -70358376 + AluJo SINE Alu 1 303 -9 305 222 0 62 chr17 19146331 19146412 -70358141 + L2 LINE L2 3163 3238 -75 34 55 0 0 chr17 19146900 19146955 -70357598 + GC_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr17 19147124 19147148 -70357405 + GC_rich Low_complexity Low_complexity 1 24 0 266 274 14 0 chr17 19147566 19147639 -70356914 - MIR SINE MIR -85 123 50 340 217 225 43 chr17 19147968 19148106 -70356447 - MIR SINE MIR -99 163 1 22 0 0 0 chr17 19148690 19148712 -70355841 + GC_rich Low_complexity Low_complexity 1 22 0 425 258 0 0 chr17 19149145 19149242 -70355311 + MIR SINE MIR 51 147 -61 2415 67 0 0 chr17 19150216 19150500 -70354053 + AluSp SINE Alu 3 286 -27 420 250 88 22 chr17 19150502 19150638 -70353915 - L2 LINE L2 -2 3311 3167 971 78 0 0 chr17 19150640 19150756 -70353797 + AluSq/x SINE Alu 1 116 -197 2281 89 0 36 chr17 19150756 19150872 -70353681 + AluSq SINE Alu 1 120 -193 2083 133 3 10 chr17 19150872 19151172 -70353381 + AluSx SINE Alu 1 298 -14 2281 89 0 36 chr17 19151172 19151359 -70353194 + AluSq SINE Alu 120 293 -20 3676 150 25 59 chr17 19151569 19151610 -70352943 - L1MB7 LINE L1 0 6184 6143 2427 76 0 0 chr17 19151610 19151901 -70352652 + AluSg SINE Alu 1 291 -19 3676 150 25 59 chr17 19151901 19152412 -70352141 - L1MB7 LINE L1 -41 6143 5667 1671 191 3 7 chr17 19152412 19152705 -70351848 - AluJo SINE Alu -2 310 19 3676 150 25 59 chr17 19152705 19152978 -70351575 - L1MB7 LINE L1 -517 5667 5386 808 202 12 57 chr17 19153021 19153124 -70351429 + L1M4 LINE L1 5067 5173 -973 2488 74 0 0 chr17 19153124 19153422 -70351131 - AluY SINE Alu -13 298 1 808 202 12 57 chr17 19153422 19153565 -70350988 + L1M4 LINE L1 5173 5302 -844 886 132 39 0 chr17 19153565 19153694 -70350859 + AluJo SINE Alu 1 134 -178 365 175 39 10 chr17 19153747 19153850 -70350703 + L1M LINE L1 5290 5395 -789 1688 142 3 82 chr17 19153853 19154170 -70350383 + AluSx SINE Alu 1 292 -20 1097 96 0 0 chr17 19154175 19154311 -70350242 + AluSq/x SINE Alu 1 136 -177 1139 182 4 54 chr17 19154311 19154353 -70350200 - L1MB7 LINE L1 -1080 5066 5023 2502 54 0 10 chr17 19154353 19154650 -70349903 + AluY SINE Alu 1 294 -17 1139 182 4 54 chr17 19154650 19154865 -70349688 - L1MB7 LINE L1 -1123 5023 4822 281 291 142 31 chr17 19155279 19155406 -70349147 + MIR SINE MIR 9 149 -113 279 208 0 19 chr17 19155412 19155465 -70349088 + L2 LINE L2 3210 3261 -11 259 275 33 17 chr17 19155533 19155653 -70348900 + MER103 DNA DNA 32 153 -13 2492 79 0 7 chr17 19155658 19155961 -70348592 + AluSp SINE Alu 1 301 -12 1791 143 3 48 chr17 19155985 19156279 -70348274 + AluJo SINE Alu 11 291 -21 2280 82 9 32 chr17 19156288 19156603 -70347950 + AluSp SINE Alu 1 308 -5 198 371 90 22 chr17 19156890 19156979 -70347574 - L2 LINE L2 -18 3295 3201 187 306 42 49 chr17 19157032 19157176 -70347377 - L2 LINE L2 -205 3067 2925 2367 84 0 3 chr17 19157336 19157633 -70346920 - AluSx SINE Alu -16 296 1 804 303 125 16 chr17 19157817 19158393 -70346160 + L2 LINE L2 2669 3311 -2 24 0 0 0 chr17 19158424 19158448 -70346105 + AT_rich Low_complexity Low_complexity 1 24 0 576 295 39 73 chr17 19158554 19158995 -70345558 - L2 LINE L2 -5 3267 2842 2311 90 16 13 chr17 19159043 19159353 -70345200 - AluY SINE Alu 0 311 1 1750 165 0 26 chr17 19159353 19159656 -70344897 - AluSg SINE Alu -15 295 1 2226 106 0 0 chr17 19159668 19159974 -70344579 - AluSq SINE Alu 0 306 1 290 20 61 20 chr17 19159984 19160033 -70344520 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 2189 93 4 0 chr17 19160033 19160312 -70344241 - AluY SINE Alu -31 280 1 2529 77 0 0 chr17 19160336 19160647 -70343906 - AluY SINE Alu 0 311 1 2488 206 60 52 chr17 19160656 19160785 -70343768 + L1MB7 LINE L1 5315 5441 -738 424 205 116 18 chr17 19160785 19160897 -70343656 + FLAM_A SINE Alu 1 123 -10 2488 206 60 52 chr17 19160897 19160981 -70343572 + L1MB7 LINE L1 5441 5523 -656 2115 106 10 3 chr17 19160981 19161282 -70343271 + AluSx SINE Alu 1 303 -9 2488 206 60 52 chr17 19161282 19161494 -70343059 + L1MB7 LINE L1 5523 5732 -447 2000 120 3 13 chr17 19161494 19161802 -70342751 + AluSq SINE Alu 2 306 -7 2291 97 3 0 chr17 19161804 19162112 -70342441 + AluSp SINE Alu 3 311 -2 2488 206 60 52 chr17 19162112 19162227 -70342326 + L1MB7 LINE L1 5732 5845 -334 2040 116 10 10 chr17 19162227 19162528 -70342025 + AluSq SINE Alu 1 301 -12 2488 206 60 52 chr17 19162528 19162770 -70341783 + L1MB7 LINE L1 5845 6175 -4 653 273 18 104 chr17 19162821 19163516 -70341037 + L1ME1 LINE L1 5800 6150 -16 2123 109 6 10 chr17 19163128 19163440 -70341113 - AluSx SINE Alu -1 311 1 402 162 5 189 chr17 19163440 19163553 -70341000 + L1MA10 LINE L1 6202 6334 0 1902 109 17 24 chr17 19167180 19167473 -70337080 - AluSq SINE Alu -22 291 1 2053 117 0 28 chr17 19167500 19167817 -70336736 + AluSx SINE Alu 1 308 -4 936 160 0 41 chr17 19167973 19168142 -70336411 - FAM SINE Alu -13 162 1 696 218 77 0 chr17 19168269 19168439 -70336114 + MER5A DNA MER1_type 1 183 -6 180 339 201 47 chr17 19168693 19169012 -70335541 + L2 LINE L2 2437 2804 -510 225 341 170 22 chr17 19169069 19169380 -70335173 + L2 LINE L2 2957 3313 0 322 316 105 26 chr17 19169429 19169581 -70334972 - MIR SINE MIR -12 250 87 276 314 24 8 chr17 19169720 19169844 -70334709 - LTR67 LTR ERVL -7 550 425 243 222 19 0 chr17 19170031 19170085 -70334468 - MLT1K LTR MaLR -493 95 41 281 249 87 104 chr17 19170121 19170228 -70334325 - L1ME4a LINE L1 -65 6056 5949 1946 113 7 14 chr17 19170228 19170510 -70334043 - AluSg SINE Alu -30 280 1 281 249 87 104 chr17 19170510 19170643 -70333910 - L1ME4a LINE L1 -172 5949 5820 1902 142 10 20 chr17 19170643 19170806 -70333747 - AluSx SINE Alu -13 299 139 2172 117 3 0 chr17 19170806 19171113 -70333440 - AluSg SINE Alu -2 308 1 1902 142 10 20 chr17 19171113 19171251 -70333302 - AluSx SINE Alu -173 139 1 491 273 107 39 chr17 19172174 19172270 -70332283 - MIR SINE MIR -2 260 172 2321 72 0 3 chr17 19172270 19172576 -70331977 - AluY SINE Alu -6 305 1 491 273 107 39 chr17 19172576 19172725 -70331828 - MIR SINE MIR -90 172 7 1729 164 14 0 chr17 19172992 19173307 -70331246 + AluJb SINE Alu 1 319 0 2388 69 7 0 chr17 19173317 19173620 -70330933 + AluY SINE Alu 1 305 -6 2140 112 7 0 chr17 19173678 19173974 -70330579 - AluSq SINE Alu -15 298 1 2089 116 6 6 chr17 19174029 19174340 -70330213 - AluY SINE Alu 0 311 1 880 167 0 6 chr17 19174611 19174767 -70329786 + L1MB7 LINE L1 6014 6168 -16 547 189 9 0 chr17 19174884 19174990 -70329563 - FRAM SINE Alu -2 174 68 2286 106 0 0 chr17 19175067 19175378 -70329175 - AluY SINE Alu 0 311 1 470 264 18 0 chr17 19176034 19176144 -70328409 - L1MC1 LINE L1 -123 6210 6099 778 123 25 8 chr17 19176144 19176266 -70328287 + L1MC1 LINE L1 6210 6333 0 1022 225 100 19 chr17 19176272 19176594 -70327959 - L1MC1 LINE L1 -743 5403 5109 1607 182 7 24 chr17 19176594 19176890 -70327663 - AluJo SINE Alu -2 310 20 1022 225 100 19 chr17 19176890 19176962 -70327591 - L1MC1 LINE L1 -1037 5109 5044 1923 113 7 27 chr17 19176962 19177125 -70327428 - AluSq SINE Alu -19 294 138 2427 76 0 0 chr17 19177125 19177429 -70327124 - AluY SINE Alu -5 306 3 1923 113 7 27 chr17 19177429 19177565 -70326988 - AluSq SINE Alu -175 138 1 1022 225 100 19 chr17 19177565 19177777 -70326776 - L1MC1 LINE L1 -1102 5044 4851 2302 75 10 0 chr17 19177777 19178072 -70326481 - AluSc SINE Alu -11 298 1 1022 225 100 19 chr17 19178072 19178442 -70326111 - L1MC1 LINE L1 -1295 4851 4353 1274 91 0 0 chr17 19178563 19178728 -70325825 - AluY SINE Alu -19 292 128 4833 110 77 41 chr17 19178755 19178938 -70325615 - L1MA3 LINE L1 0 6305 6130 2183 103 3 0 chr17 19178938 19179230 -70325323 - AluSx SINE Alu -19 293 1 4833 110 77 41 chr17 19179230 19179296 -70325257 - L1MA3 LINE L1 -175 6130 6068 2485 66 0 0 chr17 19179296 19179600 -70324953 - AluY SINE Alu -7 304 1 4833 110 77 41 chr17 19179600 19179839 -70324714 - L1MA3 LINE L1 -237 6068 5839 1971 108 7 0 chr17 19179839 19180118 -70324435 - AluSg SINE Alu 0 310 30 4833 110 77 41 chr17 19180118 19180539 -70324014 - L1MA3 LINE L1 -466 5839 5361 931 180 0 0 chr17 19180539 19180700 -70323853 - AluJo/FRAM SINE Alu -11 301 141 1662 165 53 3 chr17 19180703 19180988 -70323565 - AluJb SINE Alu -13 299 1 11026 159 47 41 chr17 19180992 19181492 -70323061 - L1MA3 LINE L1 -782 5364 4869 2208 104 0 0 chr17 19181492 19181791 -70322762 - AluSx SINE Alu -13 299 1 11026 159 47 41 chr17 19181791 19182025 -70322528 - L1MA3 LINE L1 -1277 4869 4638 2432 63 0 3 chr17 19182025 19182325 -70322228 - AluY SINE Alu -12 299 1 11026 159 47 41 chr17 19182325 19183813 -70320740 - L1MA3 LINE L1 -1508 4638 3191 2215 104 3 0 chr17 19183813 19184122 -70320431 - AluSg SINE Alu 0 310 1 11026 159 47 41 chr17 19184122 19184546 -70320007 - L1MA3 LINE L1 -2955 3191 2771 241 271 271 18 chr17 19184563 19184733 -70319820 - MIR SINE MIR -1 261 49 251 319 35 26 chr17 19184765 19184878 -70319675 - MIR SINE MIR -14 248 135 2195 97 7 7 chr17 19185047 19185347 -70319206 + AluSg SINE Alu 1 300 -10 668 184 57 13 chr17 19185399 19185557 -70318996 + L1M4 LINE L1 5152 5316 -830 244 251 17 0 chr17 19185558 19185625 -70318928 + MIR SINE MIR 64 138 -70 232 211 42 28 chr17 19185800 19185871 -70318682 + MER5C DNA MER1_type 228 299 -25 * 382 346 48 10 chr17 19185861 19186069 -70318484 + L2 LINE L2 2832 3047 -266 201 147 0 0 chr17 19186534 19186568 -70317985 + (TG)n Simple_repeat Simple_repeat 1 34 0 197 365 35 0 chr17 19186583 19186698 -70317855 - L2 LINE L2 -340 2974 2856 226 241 139 13 chr17 19187623 19187702 -70316851 + L2 LINE L2 3138 3226 -46 273 298 105 0 chr17 19188388 19188512 -70316041 + MIR3 SINE MIR 33 169 -39 814 99 91 0 chr17 19188692 19188813 -70315740 + AluJo SINE Alu 5 136 -176 1544 176 3 51 chr17 19188814 19189126 -70315427 + AluJb SINE Alu 3 299 -13 235 284 78 28 chr17 19189142 19189283 -70315270 - MLT1K LTR MaLR -63 525 378 22 35 0 0 chr17 19192997 19193026 -70311527 + AT_rich Low_complexity Low_complexity 1 29 0 2165 102 3 0 chr17 19193390 19193684 -70310869 + AluSx SINE Alu 1 295 -17 213 333 31 0 chr17 19198000 19198096 -70306457 - MIR SINE MIR -133 129 31 203 259 250 17 chr17 19198079 19198195 -70306358 + MIR3 SINE MIR 5 147 -61 * 2168 101 0 7 chr17 19200603 19200901 -70303652 - AluSx SINE Alu -16 296 1 2094 81 7 7 chr17 19200910 19201219 -70303334 - AluY SINE Alu 0 309 1 279 0 0 0 chr17 19201649 19201680 -70302873 + (CA)n Simple_repeat Simple_repeat 1 31 0 375 297 187 30 chr17 19202017 19202552 -70302001 + L1MEd LINE L1 980 1648 -928 1820 165 0 0 chr17 19202638 19202929 -70301624 + AluJo SINE Alu 1 291 -21 390 354 50 61 chr17 19203007 19203349 -70301204 + L1MEd LINE L1 1900 2237 -4159 478 302 38 36 chr17 19203350 19203794 -70300759 + L1MEd LINE L1 2199 2643 -3572 520 317 85 31 chr17 19203825 19204084 -70300469 - L1MEc LINE L1 -4063 2333 2061 2270 101 0 9 chr17 19204111 19204427 -70300126 - AluSq SINE Alu 0 313 1 279 0 0 0 chr17 19204509 19204540 -70300013 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 190 224 6 56 chr17 19204807 19204968 -70299585 + G-rich Low_complexity Low_complexity 5 157 0 367 244 274 30 chr17 19205018 19205219 -70299334 - MIR SINE MIR -8 254 5 765 291 107 9 chr17 19205851 19206188 -70298365 - L1MB2 LINE L1 0 6171 5802 186 43 0 0 chr17 19206190 19206213 -70298340 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1518 90 21 21 chr17 19206213 19206446 -70298107 - AluSx SINE Alu -29 283 51 317 236 194 7 chr17 19206467 19206611 -70297942 + L2 LINE L2 2625 2795 -519 353 293 30 0 chr17 19207950 19208083 -70296470 + MIR3 SINE MIR 25 161 -47 2251 67 14 0 chr17 19208357 19208663 -70295890 - AluSp SINE Alu 0 313 4 339 242 212 32 chr17 19209088 19209278 -70295275 + MLT1G LTR MaLR 104 330 -265 283 214 97 19 chr17 19209314 19209417 -70295136 + MLT1G LTR MaLR 440 550 -5 240 218 0 18 chr17 19209513 19209568 -70294985 + MLT1I LTR MaLR 115 168 -241 436 148 0 12 chr17 19209709 19209790 -70294763 + MLT1I LTR MaLR 330 409 0 1199 282 24 16 chr17 19209902 19210274 -70294279 - LTR16C LTR ERVL -19 472 98 1911 123 25 44 chr17 19211579 19211853 -70292700 + AluSx SINE Alu 1 270 -42 405 0 0 0 chr17 19211853 19211898 -70292655 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1911 123 25 44 chr17 19211898 19211940 -70292613 + AluSx SINE Alu 270 311 -1 1944 211 11 47 chr17 19211940 19212014 -70292539 + L1 LINE L1 2957 3032 -3114 2380 50 0 10 chr17 19212014 19212313 -70292240 + AluY SINE Alu 1 296 -15 1944 211 11 47 chr17 19212313 19212872 -70291681 + L1 LINE L1 3032 3567 -2579 1492 158 0 33 chr17 19212875 19213147 -70291406 + AluJo SINE Alu 16 278 -34 210 37 0 0 chr17 19213147 19213174 -70291379 + (TC)n Simple_repeat Simple_repeat 2 28 0 1761 106 23 50 chr17 19213468 19213770 -70290783 - AluSx SINE Alu -18 294 1 264 230 169 20 chr17 19214336 19214484 -70290069 + LTR67 LTR ERVL 387 556 -1 853 55 0 0 chr17 19214647 19214756 -70289797 + MER41A LTR ERV1 1 109 -445 918 98 0 8 chr17 19214871 19215004 -70289549 + MER41B LTR ERV1 106 237 -398 213 280 88 48 chr17 19215059 19215184 -70289369 + L2 LINE L2 2922 3051 -221 292 282 0 47 chr17 19215266 19215351 -70289202 + MIR SINE MIR 65 145 -117 2651 112 115 137 chr17 19215353 19215502 -70289051 + MER4A LTR ERV1 1 152 -512 2223 86 3 10 chr17 19215502 19215803 -70288750 - AluSc SINE Alu -10 299 1 2651 112 115 137 chr17 19215803 19215821 -70288732 + MER4A LTR ERV1 152 169 -495 1191 55 0 0 chr17 19215821 19215967 -70288586 + L1PA11 LINE L1 6028 6173 -1 2651 112 115 137 chr17 19215967 19216477 -70288076 + MER4A LTR ERV1 169 664 0 2204 152 40 72 chr17 19216744 19216807 -70287746 + Tigger1 DNA MER2_type 16 79 -2339 2256 100 0 3 chr17 19216807 19217118 -70287435 + AluSx SINE Alu 1 310 -2 2204 152 40 72 chr17 19217118 19217529 -70287024 + Tigger1 DNA MER2_type 79 475 -1943 1025 116 0 0 chr17 19217533 19217679 -70286874 - FRAM SINE Alu -21 155 10 11502 108 47 26 chr17 19217691 19219002 -70285551 + Tigger1 DNA MER2_type 464 1829 -589 1665 164 14 7 chr17 19219002 19219294 -70285259 - AluJb SINE Alu -18 294 1 11502 108 47 26 chr17 19219294 19219897 -70284656 + Tigger1 DNA MER2_type 1829 2418 0 441 276 191 0 chr17 19220282 19220434 -70284119 + MER91A DNA MER1_type 9 189 -7 429 290 41 12 chr17 19221367 19221536 -70283017 - MER5B DNA MER1_type -4 174 1 439 221 181 0 chr17 19221664 19221791 -70282762 + MER5A DNA MER1_type 1 150 -39 455 226 151 13 chr17 19221841 19221907 -70282646 - MER5A DNA MER1_type 0 189 133 2025 99 24 7 chr17 19221907 19222200 -70282353 + AluY SINE Alu 1 298 -13 455 226 151 13 chr17 19222200 19222292 -70282261 - MER5A DNA MER1_type -56 133 9 1904 116 0 36 chr17 19222413 19222746 -70281807 + AluSx SINE Alu 8 329 0 2063 181 28 7 chr17 19222749 19223175 -70281378 - L1MB7 LINE L1 -64 6120 5686 244 315 81 9 chr17 19223355 19223466 -70281087 + MIR SINE MIR 28 146 -116 199 282 223 19 chr17 19223924 19224027 -70280526 + MIR SINE MIR 44 167 -95 293 263 0 53 chr17 19224131 19224226 -70280327 + MIR3 SINE MIR 114 203 -5 1650 247 46 46 chr17 19224818 19225361 -70279192 - L1ME2 LINE L1 0 6164 5622 187 211 14 14 chr17 19225382 19225453 -70279100 + GA-rich Low_complexity Low_complexity 2 72 0 496 283 29 1 chr17 19225551 19225707 -70278846 + MIR SINE MIR 24 182 -63 534 284 87 22 chr17 19225872 19226055 -70278498 - MIR SINE MIR -8 254 60 1122 196 87 75 chr17 19226064 19226090 -70278463 - L1MB5 LINE L1 -217 5957 5933 2093 107 0 19 chr17 19226090 19226399 -70278154 - AluSx SINE Alu -9 303 1 1122 196 87 75 chr17 19226399 19226730 -70277823 - L1MB5 LINE L1 -241 5933 5596 252 0 0 0 chr17 19226732 19226760 -70277793 + (T)n Simple_repeat Simple_repeat 1 28 0 467 194 276 0 chr17 19228151 19228285 -70276268 - MER45A DNA AcHobo -1 177 7 530 202 15 14 chr17 19228832 19229009 -70275544 - L1MB3 LINE L1 0 6183 5882 196 262 131 0 chr17 19229293 19229377 -70275176 - MIR3 SINE MIR -53 155 61 208 0 62 0 chr17 19229574 19229606 -70274947 + (GA)n Simple_repeat Simple_repeat 1 34 0 766 277 154 9 chr17 19230014 19230562 -70273991 + L1MC4 LINE L1 6513 7369 -673 192 283 66 33 chr17 19230590 19230742 -70273811 + L2 LINE L2 2904 3060 -212 215 333 0 69 chr17 19231162 19231264 -70273289 + MIR3 SINE MIR 61 155 -53 573 269 62 39 chr17 19232237 19232445 -70272108 + MIR SINE MIR 31 243 -19 367 141 0 0 chr17 19232748 19232812 -70271741 + AluJ/FRAM SINE Alu 224 287 -15 460 281 0 8 chr17 19232868 19232989 -70271564 - AluJo SINE Alu -77 235 116 228 195 0 37 chr17 19232989 19233071 -70271482 + MER53 DNA DNA 81 159 -30 28 0 0 0 chr17 19233071 19233099 -70271454 + AT_rich Low_complexity Low_complexity 1 28 0 201 121 0 0 chr17 19233107 19233140 -70271413 + (TG)n Simple_repeat Simple_repeat 2 34 0 498 202 26 30 chr17 19233298 19233436 -70271117 - MER97a DNA MER1_type? 0 894 841 2103 116 0 7 chr17 19233436 19233738 -70270815 + AluSq SINE Alu 3 302 -11 498 202 26 30 chr17 19233738 19233796 -70270757 - MER97a DNA MER1_type? -53 841 784 2019 98 10 14 chr17 19234111 19234408 -70270145 - AluSp SINE Alu -16 297 2 1368 279 46 24 chr17 19234526 19235028 -70269525 - MER97c DNA MER1_type? -485 605 93 3141 159 66 15 chr17 19235028 19235923 -70268630 + LTR12 LTR ERV1 2 714 0 1157 207 16 12 chr17 19235959 19236201 -70268352 + AluJo SINE Alu 11 253 -59 1653 114 57 11 chr17 19236243 19236505 -70268048 - AluSx SINE Alu -25 287 14 563 274 131 8 chr17 19236625 19236877 -70267676 + LTR16C LTR ERVL 209 491 0 25 0 0 0 chr17 19236888 19236913 -70267640 + AT_rich Low_complexity Low_complexity 1 25 0 1950 122 31 0 chr17 19236929 19237223 -70267330 + AluSc SINE Alu 1 303 -6 305 247 103 14 chr17 19237792 19237965 -70266588 - MIR SINE MIR -63 145 3 * 585 288 121 30 chr17 19237965 19238489 -70266064 + L2 LINE L2 2746 3313 0 475 250 98 12 chr17 19238580 19238744 -70265809 - L1MC5 LINE L1 -11 7950 7773 675 268 91 81 chr17 19238815 19239088 -70265465 - MLT1E LTR MaLR -163 463 139 1474 175 13 32 chr17 19239088 19239396 -70265157 + AluJo SINE Alu 9 310 -2 675 268 91 81 chr17 19239396 19239497 -70265056 - MLT1E LTR MaLR -487 139 40 1218 263 131 16 chr17 19239918 19240380 -70264173 + MLT1F LTR MaLR 1 534 -8 381 315 9 0 chr17 19240389 19240500 -70264053 + LTR16C LTR ERVL 380 491 0 2131 103 0 7 chr17 19241008 19241300 -70263253 - AluSc SINE Alu -19 290 1 231 306 8 65 chr17 19241354 19241478 -70263075 + L2 LINE L2 2863 2979 -334 224 348 11 0 chr17 19242491 19242583 -70261970 + L3b LINE CR1 1132 1224 -359 233 294 76 17 chr17 19242775 19242894 -70261659 - MIR SINE MIR -67 141 16 413 269 185 28 chr17 19243044 19243418 -70261135 + L2 LINE L2 2628 3063 -250 2100 168 239 4 chr17 19243646 19244098 -70260455 + LTR64 LTR ERVK 1 558 0 593 281 54 5 chr17 19244837 19245022 -70259531 - MER91A DNA MER1_type -2 194 1 913 186 18 41 chr17 19245352 19245470 -70259083 + L1MB5 LINE L1 5551 5663 -515 2396 47 0 10 chr17 19245470 19245770 -70258783 + AluY SINE Alu 1 297 -14 913 186 18 41 chr17 19245770 19245895 -70258658 + L1MB5 LINE L1 5663 5789 -389 339 325 33 0 chr17 19245896 19246016 -70258537 + MIR SINE MIR 64 187 -75 1643 208 73 5 chr17 19246065 19246435 -70258118 + L1MB5 LINE L1 5780 6174 0 1398 193 0 39 chr17 19246437 19246743 -70257810 + AluJb SINE Alu 16 309 -3 341 310 36 50 chr17 19248203 19248387 -70256166 - MIR SINE MIR -43 219 33 2158 145 71 60 chr17 19248486 19248906 -70255647 + MSTC LTR MaLR 1 425 -3 294 298 99 14 chr17 19248956 19249097 -70255456 + MIR SINE MIR 96 248 -14 208 261 62 0 chr17 19250589 19250654 -70253899 + MIR3 SINE MIR 115 183 -25 208 357 0 13 chr17 19250701 19250855 -70253698 + GA-rich Low_complexity Low_complexity 2 153 0 429 197 39 28 chr17 19250861 19251039 -70253514 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 932 174 14 5 chr17 19251341 19251554 -70252999 - L1MD3 LINE L1 -2 7993 7779 1122 176 0 62 chr17 19251639 19251961 -70252592 + AluJb SINE Alu 84 390 0 562 208 0 0 chr17 19251961 19252057 -70252496 - MER58A DNA MER1_type -11 96 1 3225 223 27 8 chr17 19252103 19252875 -70251678 - L1MC4a LINE L1 -286 7522 6736 2167 66 0 7 chr17 19252905 19253179 -70251374 - AluSc SINE Alu -17 292 21 188 67 33 0 chr17 19253796 19253826 -70250727 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 265 174 248 28 chr17 19253832 19253941 -70250612 - L2 LINE L2 -22 3291 3159 312 27 0 0 chr17 19253941 19253978 -70250575 + (TG)n Simple_repeat Simple_repeat 1 37 0 442 306 134 14 chr17 19254501 19254717 -70249836 + MIR SINE MIR 16 257 -5 1258 281 51 57 chr17 19254741 19254809 -70249744 - L1ME4a LINE L1 -16 6105 6038 1727 132 0 63 chr17 19254809 19255142 -70249411 + AluSx SINE Alu 1 312 0 1258 281 51 57 chr17 19255142 19255749 -70248804 - L1ME4a LINE L1 -83 6038 5433 1734 169 3 28 chr17 19255749 19256069 -70248484 - AluJb SINE Alu 0 312 1 1258 281 51 57 chr17 19256069 19256177 -70248376 - L1ME4a LINE L1 -688 5433 5326 193 204 0 23 chr17 19256183 19256227 -70248326 - MIR SINE MIR -75 133 91 411 268 57 19 chr17 19256379 19256536 -70248017 - LTR16A1 LTR ERVL -78 379 217 406 288 126 42 chr17 19256740 19256931 -70247622 + MLT1K LTR MaLR 55 261 -327 744 309 112 22 chr17 19256941 19257342 -70247211 - L1ME3A LINE L1 -336 5834 5398 202 353 115 6 chr17 19257435 19257591 -70246962 + L2 LINE L2 2934 3106 -166 1782 127 11 95 chr17 19258784 19259098 -70245455 + L1MB7 LINE L1 5831 6109 -75 1669 202 3 3 chr17 19259098 19259410 -70245143 - AluJo SINE Alu 0 312 1 1782 127 11 95 chr17 19259410 19259473 -70245080 + L1MB7 LINE L1 6109 6176 -8 1328 227 101 26 chr17 19259536 19260003 -70244550 - MLT1J LTR MaLR -8 503 2 342 248 203 21 chr17 19261047 19261327 -70243226 - MLT1H1 LTR MaLR -1 554 201 3305 150 92 37 chr17 19261483 19262158 -70242395 + LTR62 LTR ERVK 3 714 -5 743 166 57 100 chr17 19262161 19262390 -70242163 + MLT1H LTR MaLR 65 283 -266 1939 141 20 27 chr17 19262559 19262857 -70241696 + AluSx SINE Alu 1 296 -16 1796 132 78 11 chr17 19262951 19263232 -70241321 + MER1B DNA MER1_type 40 339 0 1194 252 155 13 chr17 19263412 19264115 -70240438 - L2 LINE L2 -21 3292 2494 883 193 6 12 chr17 19264806 19264967 -70239586 - AluJb SINE Alu -16 296 137 284 323 69 21 chr17 19265378 19265567 -70238986 - L1ME LINE L1 -415 5747 5550 7931 186 109 16 chr17 19267540 19269144 -70235409 + MER52A LTR ERV1 3 1755 0 312 200 18 0 chr17 19269153 19269208 -70235345 + MER52A-int LTR ERV1 7 62 -7029 279 65 0 0 chr17 19269209 19269255 -70235298 - L1PA2 LINE L1 0 6155 6110 3316 123 21 28 chr17 19269255 19269703 -70234850 + MER52A-int LTR ERV1 46 491 -6600 1980 120 20 27 chr17 19269703 19270002 -70234551 + AluSx SINE Alu 2 298 -14 3316 123 21 28 chr17 19270002 19270083 -70234470 + MER52A-int LTR ERV1 491 571 -6520 7181 114 42 8 chr17 19270196 19271293 -70233260 + MER52A-int LTR ERV1 1698 2831 -4260 4986 172 64 60 chr17 19271375 19271486 -70233067 + MER57-int LTR ERV1 1977 2086 -5332 2101 91 0 4 chr17 19271486 19271751 -70232802 + AluSc SINE Alu 38 301 -8 4986 172 64 60 chr17 19271751 19273868 -70230685 + MER57-int LTR ERV1 2086 5739 -1679 584 217 0 0 chr17 19273900 19274006 -70230547 + MER52A LTR ERV1 1650 1755 0 1994 59 0 11 chr17 19274149 19274421 -70230132 - L1P LINE L1 -1168 4978 4710 5831 40 0 8 chr17 19274421 19275146 -70229407 + L1PA5 LINE L1 5426 6148 -6 1047 263 29 58 chr17 19275718 19276198 -70228355 + L1MC5 LINE L1 7471 7936 -25 250 335 60 33 chr17 19276491 19276673 -70227880 - L1MC4a LINE L1 -1800 6008 5822 1879 107 82 28 chr17 19276735 19277091 -70227462 + THE1C LTR MaLR 1 375 0 422 299 8 0 chr17 19277094 19277221 -70227332 - L1MC4a LINE L1 -1990 5818 5691 493 265 103 40 chr17 19277384 19277403 -70227150 + MIR SINE MIR 17 33 -229 1769 134 22 73 chr17 19277403 19277717 -70226836 + AluJo SINE Alu 1 298 -14 493 265 103 40 chr17 19277717 19277920 -70226633 + MIR SINE MIR 33 253 -9 231 61 0 0 chr17 19277922 19277955 -70226598 + (CAT)n Simple_repeat Simple_repeat 2 34 0 528 336 27 16 chr17 19278115 19278371 -70226182 - MLT1L LTR MaLR -5 610 352 1670 137 8 19 chr17 19279704 19279967 -70224586 + AluSq SINE Alu 2 261 -52 1443 220 35 9 chr17 19280138 19280484 -70224069 - Tigger6 DNA MER2_type -1233 364 10 185 91 0 30 chr17 19282037 19282070 -70222483 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 69 0 0 chr17 19282098 19282127 -70222426 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 1070 204 62 16 chr17 19282597 19282905 -70221648 - MER33 DNA MER1_type -2 322 1 613 309 62 21 chr17 19282905 19283148 -70221405 + L3 LINE CR1 1306 1558 -19 273 242 42 21 chr17 19284232 19284327 -70220226 + MER103 DNA DNA 59 155 -11 307 291 29 22 chr17 19284462 19284614 -70219939 + MER5B DNA MER1_type 23 186 -3 180 152 0 0 chr17 19285280 19285313 -70219240 + T-rich Low_complexity Low_complexity 1 33 0 793 232 145 56 chr17 19285536 19285929 -70218624 - MLT1C LTR MaLR -34 433 6 187 333 48 24 chr17 19286166 19286250 -70218303 + MIR SINE MIR 107 192 -70 342 239 0 0 chr17 19286552 19286661 -70217892 + (CCA)n Simple_repeat Simple_repeat 1 109 0 895 118 3 40 chr17 19286665 19286963 -70217590 + (CACCAT)n Simple_repeat Simple_repeat 1 287 0 606 93 0 0 chr17 19287010 19287096 -70217457 + HY3 scRNA scRNA 14 99 -2 21 0 0 0 chr17 19287096 19287117 -70217436 + AT_rich Low_complexity Low_complexity 1 21 0 185 339 17 0 chr17 19287236 19287295 -70217258 - MIR3 SINE MIR -48 160 101 322 327 72 14 chr17 19287535 19287813 -70216740 + L1M4 LINE L1 3966 4259 -1887 2387 71 13 13 chr17 19287866 19288175 -70216378 + AluY SINE Alu 1 309 -2 866 193 0 6 chr17 19288212 19288373 -70216180 + FRAM SINE Alu 1 160 -6 668 247 186 30 chr17 19289071 19289443 -70215110 - MLT1G LTR MaLR 0 590 161 2130 100 0 7 chr17 19289484 19289795 -70214758 + AluSx SINE Alu 5 313 0 452 355 36 7 chr17 19289840 19290147 -70214406 - MERVL LTR ERVL -1261 4224 3909 860 156 50 0 chr17 19290234 19290414 -70214139 - MER53 DNA DNA 0 189 1 1034 315 104 56 chr17 19290421 19291352 -70213201 - MERVL LTR ERVL -1841 3923 2948 216 111 0 0 chr17 19291361 19291397 -70213156 + (TC)n Simple_repeat Simple_repeat 1 36 0 34 42 0 0 chr17 19292205 19292253 -70212300 + AT_rich Low_complexity Low_complexity 1 48 0 402 305 96 28 chr17 19292477 19292628 -70211925 + L1ME4a LINE L1 5812 5978 -143 2228 130 0 3 chr17 19292628 19292935 -70211618 + AluSx SINE Alu 1 306 -6 402 305 96 28 chr17 19292935 19292960 -70211593 + L1ME4a LINE L1 5978 6000 -121 357 295 0 9 chr17 19292960 19293065 -70211488 - MLT1L LTR MaLR -390 225 122 209 238 0 63 chr17 19294027 19294090 -70210463 + L2 LINE L2 3243 3301 -12 253 364 21 29 chr17 19294426 19294566 -70209987 - MIR SINE MIR -58 204 66 2184 149 3 14 chr17 19294780 19295149 -70209404 - MLT1A1 LTR MaLR 0 365 1 2241 114 0 19 chr17 19295634 19295951 -70208602 - AluSx SINE Alu -1 311 1 354 161 58 11 chr17 19296304 19296391 -70208162 + AluSg/x SINE Alu 212 302 0 1961 127 27 13 chr17 19296450 19296749 -70207804 - AluSx SINE Alu -9 303 1 1105 151 143 59 chr17 19297438 19297710 -70206843 - AluSq SINE Alu -8 295 1 2201 134 36 19 chr17 19297957 19298368 -70206185 + L1MA4 LINE L1 5877 6294 -6 981 170 50 46 chr17 19298381 19298414 -70206139 + L1MB3 LINE L1 5575 5606 -577 2282 80 7 10 chr17 19298414 19298715 -70205838 + AluSp SINE Alu 1 300 -13 981 170 50 46 chr17 19298715 19298899 -70205654 + L1MB3 LINE L1 5606 5793 -390 1732 126 74 66 chr17 19298900 19298981 -70205572 + MER4B LTR ERV1 4 83 -527 2372 97 0 10 chr17 19298981 19299292 -70205261 + AluSq SINE Alu 1 308 -5 1732 126 74 66 chr17 19299292 19299590 -70204963 + MER4B LTR ERV1 83 386 -224 670 87 11 0 chr17 19299585 19299677 -70204876 + MER4A LTR ERV1 572 664 0 * 250 152 0 0 chr17 19299677 19299723 -70204830 + L1MB3 LINE L1 5787 5832 -348 2102 127 11 22 chr17 19299736 19300107 -70204446 + L1MB3 LINE L1 5814 6180 -3 24 0 0 0 chr17 19300109 19300133 -70204420 + AT_rich Low_complexity Low_complexity 1 24 0 544 280 63 11 chr17 19301184 19301359 -70203194 + MIR SINE MIR 77 260 -2 216 229 0 0 chr17 19301748 19301809 -70202744 + T-rich Low_complexity Low_complexity 1 61 0 6462 50 18 35 chr17 19301809 19302662 -70201891 - SVA Other Other 0 1386 549 447 50 8 50 chr17 19302676 19302796 -70201757 - SVA Other Other -592 794 680 25 0 0 0 chr17 19303073 19303098 -70201455 + GC_rich Low_complexity Low_complexity 1 25 0 1201 58 0 44 chr17 19303315 19303521 -70201032 - SVA Other Other -520 866 670 338 211 110 158 chr17 19303551 19303760 -70200793 - MLT1K LTR MaLR -7 581 383 230 331 33 58 chr17 19303806 19303927 -70200626 - MLT1K LTR MaLR -368 220 103 2503 184 56 12 chr17 19304198 19304715 -70199838 + MLT1F LTR MaLR 3 542 0 2097 94 44 4 chr17 19304917 19305192 -70199361 + AluSx SINE Alu 6 291 -21 193 248 339 8 chr17 19306112 19306233 -70198320 - L3 LINE CR1 -103 1474 1314 419 222 19 28 chr17 19307667 19307775 -70196778 + MER5A DNA MER1_type 3 109 -80 1284 234 85 31 chr17 19307931 19308319 -70196234 + MLT1C LTR MaLR 6 414 -53 186 103 0 0 chr17 19308766 19308795 -70195758 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 445 228 26 26 chr17 19308984 19309098 -70195455 + MER5B DNA MER1_type 1 114 -64 422 261 35 0 chr17 19309323 19309438 -70195115 - MIR SINE MIR -117 145 27 2420 92 0 3 chr17 19309492 19309797 -70194756 + AluSq SINE Alu 1 304 -9 1440 241 137 16 chr17 19309899 19310338 -70194215 - L1ME3A LINE L1 -3 6167 5676 336 186 47 23 chr17 19310348 19310434 -70194119 + LTR67 LTR ERVL 469 556 -1 387 172 115 159 chr17 19310440 19310597 -70193956 - MIR SINE MIR -101 161 12 600 235 72 24 chr17 19311496 19311662 -70192891 + MER5A DNA MER1_type 14 187 -2 296 300 67 0 chr17 19311675 19311765 -70192788 - MIR SINE MIR -94 168 73 418 233 0 0 chr17 19311849 19311922 -70192631 - MLT1J LTR MaLR -202 309 237 2225 85 10 7 chr17 19311922 19312229 -70192324 + AluSx SINE Alu 1 308 -4 288 149 0 104 chr17 19312230 19312297 -70192256 + Alu SINE Alu 239 298 -2 818 258 46 12 chr17 19312300 19312540 -70192013 - MLT1J LTR MaLR -263 248 1 274 282 78 49 chr17 19312576 19312718 -70191835 + L2 LINE L2 3136 3281 -32 2018 135 0 13 chr17 19312986 19313298 -70191255 + AluSx SINE Alu 1 308 -4 560 292 51 20 chr17 19314292 19314487 -70190066 + L2 LINE L2 3105 3305 -8 2217 92 3 3 chr17 19315816 19316111 -70188442 - AluSp SINE Alu -18 295 1 2113 84 0 45 chr17 19316864 19317172 -70187381 + AluSg SINE Alu 1 294 -16 2239 82 16 10 chr17 19317711 19318017 -70186536 + AluSg SINE Alu 1 308 -2 325 318 61 20 chr17 19318589 19318737 -70185816 + L1ME4a LINE L1 5595 5748 -373 414 165 16 116 chr17 19318749 19318796 -70185757 - MER58B DNA MER1_type -2085 335 285 2181 92 14 0 chr17 19318796 19319090 -70185463 - AluSg SINE Alu -12 298 1 414 165 16 116 chr17 19319090 19319163 -70185390 - MER58B DNA MER1_type -2135 285 227 405 273 158 44 chr17 19319274 19319310 -70185243 + L1ME4a LINE L1 5789 5819 -302 1831 126 3 18 chr17 19319310 19319619 -70184934 + AluSc SINE Alu 1 305 0 405 273 158 44 chr17 19319619 19319878 -70184675 + L1ME4a LINE L1 5819 6119 -2 221 307 123 34 chr17 19320101 19320280 -70184273 + MIR SINE MIR 67 261 -1 512 133 0 31 chr17 19320299 19320397 -70184156 + (CACCAT)n Simple_repeat Simple_repeat 3 97 0 2072 165 95 32 chr17 19320564 19320716 -70183837 - MSTB LTR MaLR 0 426 285 2068 136 0 0 chr17 19320716 19321010 -70183543 + AluSx SINE Alu 1 294 -18 2072 165 95 32 chr17 19321010 19321257 -70183296 - MSTB LTR MaLR -141 285 2 319 282 100 9 chr17 19321262 19321372 -70183181 + MIR3 SINE MIR 67 186 -22 983 183 46 5 chr17 19322359 19322578 -70181975 - AluJo SINE Alu 0 312 85 352 174 0 43 chr17 19322578 19322647 -70181906 - AluSg/x SINE Alu -52 250 185 2226 98 0 22 chr17 19322754 19323071 -70181482 + AluSq SINE Alu 1 310 -3 862 238 22 2 chr17 19324119 19324346 -70180207 - MIR SINE MIR 0 262 34 1179 189 31 53 chr17 19324690 19324915 -70179638 + MER33 DNA MER1_type 10 227 -2358 1966 130 47 7 chr17 19324915 19325215 -70179338 - AluSx SINE Alu 0 312 1 1179 189 31 53 chr17 19325215 19325311 -70179242 + MER33 DNA MER1_type 227 324 0 288 276 51 0 chr17 19325479 19325577 -70178976 - MIR SINE MIR -148 114 12 227 349 20 7 chr17 19326206 19326317 -70178236 + MIR SINE MIR 76 187 -62 2438 43 3 7 chr17 19327591 19327891 -70176662 + AluSp SINE Alu 1 299 -14 231 260 0 31 chr17 19328234 19328330 -70176223 + (CCG)n Simple_repeat Simple_repeat 2 94 0 334 265 39 0 chr17 19328452 19328554 -70175999 - MIR3 SINE MIR -21 187 82 232 226 81 0 chr17 19328670 19328732 -70175821 + MIR SINE MIR 85 151 -111 1317 145 0 14 chr17 19329127 19329341 -70175212 - AluJb SINE Alu -16 296 86 2147 95 10 3 chr17 19329711 19330007 -70174546 + AluSq SINE Alu 1 298 -15 304 350 0 8 chr17 19330298 19330421 -70174132 + MIR SINE MIR 21 142 -120 335 280 108 0 chr17 19330442 19330570 -70173983 + MIR SINE MIR 44 184 -63 1508 170 91 11 chr17 19330697 19330973 -70173580 + AluJo SINE Alu 14 311 -1 1483 242 120 66 chr17 19331060 19331651 -70172902 + HAL1 LINE L1 265 887 -1620 749 238 24 24 chr17 19331654 19331822 -70172731 + FRAM SINE Alu 1 168 -8 558 272 166 25 chr17 19332617 19333021 -70171532 - L1MC4a LINE L1 -87 6034 5574 429 342 20 10 chr17 19333206 19333408 -70171145 - L1MC4a LINE L1 -1979 5829 5626 586 341 128 49 chr17 19333641 19334209 -70170344 - L1MC4a LINE L1 -861 5285 4673 2250 70 0 13 chr17 19334829 19335129 -70169424 + AluSc SINE Alu 1 296 -13 913 147 0 117 chr17 19336185 19336416 -70168137 - AluSg/x SINE Alu -5 307 104 586 104 229 139 chr17 19336425 19336569 -70167984 - AluSx SINE Alu -150 162 6 390 287 31 21 chr17 19337173 19337380 -70167173 + L1ME4a LINE L1 5475 5681 -460 4372 129 15 127 chr17 19337380 19338920 -70165633 + pTR5 LTR ERV1 755 2606 0 359 362 56 44 chr17 19338959 19339299 -70165254 + L1ME4a LINE L1 5775 6118 -3 2313 79 10 3 chr17 19339760 19340065 -70164488 + AluSp SINE Alu 1 307 -6 24 32 0 0 chr17 19340694 19340725 -70163828 + AT_rich Low_complexity Low_complexity 1 31 0 2134 85 0 36 chr17 19341372 19341679 -70162874 + AluSx SINE Alu 1 296 -16 347 281 44 0 chr17 19342138 19342252 -70162301 - L2 LINE L2 0 3272 3154 201 292 26 44 chr17 19342271 19342384 -70162169 - L2 LINE L2 -26 3246 3136 229 320 118 17 chr17 19344854 19345032 -70159521 - MIR SINE MIR -2 260 65 24 32 0 0 chr17 19345693 19345724 -70158829 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr17 19346515 19346538 -70158015 + (CCG)n Simple_repeat Simple_repeat 1 23 0 203 59 0 29 chr17 19347589 19347623 -70156930 + (GGCTG)n Simple_repeat Simple_repeat 4 36 0 201 294 0 0 chr17 19347701 19347769 -70156784 + (CCCCG)n Simple_repeat Simple_repeat 3 70 0 204 254 17 0 chr17 19349408 19349467 -70155086 + MER91A DNA MER1_type 14 73 -123 1099 111 0 0 chr17 19351542 19351695 -70152858 - AluSg/x SINE Alu -38 272 120 427 203 116 14 chr17 19351696 19351834 -70152719 + L2 LINE L2 2926 3077 -236 2303 71 3 13 chr17 19351970 19352281 -70152272 - AluSc SINE Alu -1 308 1 425 333 104 3 chr17 19352349 19352689 -70151864 - L1ME3 LINE L1 -12 6150 5733 2170 101 0 16 chr17 19352914 19353232 -70151321 + AluSq SINE Alu 1 313 0 2401 229 33 33 chr17 19353244 19353881 -70150672 + L1MB8 LINE L1 5540 6176 -2 198 286 29 57 chr17 19354395 19354500 -70150053 + L2 LINE L2 2932 3033 -239 343 93 0 19 chr17 19354699 19354753 -70149800 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 207 0 0 0 chr17 19355526 19355549 -70149004 + (CTGGGG)n Simple_repeat Simple_repeat 6 28 0 256 100 20 20 chr17 19358510 19358560 -70145993 + (GGGA)n Simple_repeat Simple_repeat 4 53 0 648 293 39 14 chr17 19360275 19360483 -70144070 + MER58 DNA MER1_type 56 268 -73 195 186 0 0 chr17 19363092 19363135 -70141418 + C-rich Low_complexity Low_complexity 6 48 0 434 313 42 6 chr17 19364146 19364312 -70140241 - Charlie8 DNA MER1_type -2244 173 2 2033 110 48 0 chr17 19364618 19364908 -70139645 + AluSx SINE Alu 3 306 -6 426 191 22 0 chr17 19365273 19365409 -70139144 + (TCCA)n Simple_repeat Simple_repeat 1 139 0 229 339 85 25 chr17 19365565 19365683 -70138870 + L2 LINE L2 3143 3267 -5 933 203 286 0 chr17 19368221 19368616 -70135937 + MLT1E1 LTR MaLR 147 654 0 692 237 105 23 chr17 19370089 19370308 -70134245 + L1MB5 LINE L1 5928 6164 -10 184 299 104 0 chr17 19370997 19371074 -70133479 - L2 LINE L2 -787 2527 2443 253 302 38 38 chr17 19371700 19371806 -70132747 + MIR SINE MIR 36 141 -121 2272 63 0 11 chr17 19373129 19373415 -70131138 - AluSx SINE Alu -29 283 1 2269 201 55 72 chr17 19375397 19376032 -70128521 - L1MB7 LINE L1 -95 6089 5465 1191 204 134 19 chr17 19376032 19376301 -70128252 + AluJo SINE Alu 3 302 0 2269 201 55 72 chr17 19376301 19376358 -70128195 - L1MB7 LINE L1 -719 5465 5409 2341 88 3 0 chr17 19376376 19376681 -70127872 + AluSc SINE Alu 1 306 -3 251 314 70 26 chr17 19377226 19377261 -70127292 - MER53 DNA DNA -26 163 131 2101 101 0 4 chr17 19377261 19377539 -70127014 + AluSg SINE Alu 1 277 -33 194 0 39 0 chr17 19377541 19377567 -70126986 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 251 314 70 26 chr17 19377567 19377684 -70126869 - MER53 DNA DNA -58 131 1 186 254 102 0 chr17 19378075 19378134 -70126419 + L2 LINE L2 3127 3191 -81 2366 73 3 0 chr17 19378580 19378883 -70125670 - AluSp SINE Alu -7 306 3 668 276 33 38 chr17 19378988 19379198 -70125355 + MIR SINE MIR 25 233 -29 606 292 51 36 chr17 19381350 19381686 -70122867 + L1MC4a LINE L1 5700 6040 -1768 2137 114 10 0 chr17 19381762 19382068 -70122485 + AluSx SINE Alu 1 309 -3 476 333 123 35 chr17 19382113 19382431 -70122122 + L1MC4a LINE L1 6277 6622 -1186 1350 81 0 0 chr17 19382437 19382610 -70121943 + AluSg/x SINE Alu 127 299 -11 487 228 51 30 chr17 19382633 19382836 -70121717 + L1MC5 LINE L1 6673 6978 -1064 954 239 14 40 chr17 19383002 19383618 -70120935 + L1M4 LINE L1 4651 5333 -830 * 1836 207 49 36 chr17 19383614 19384294 -70120259 + L1ME2 LINE L1 4013 4683 -1481 2133 125 3 0 chr17 19384294 19384599 -70119954 + AluSx SINE Alu 1 306 -6 1836 207 49 36 chr17 19384599 19385277 -70119276 + L1ME2 LINE L1 4683 5351 -813 2147 108 20 3 chr17 19385277 19385574 -70118979 - AluSx SINE Alu -10 302 1 1836 207 49 36 chr17 19385574 19386095 -70118458 + L1ME2 LINE L1 5351 6096 -68 1469 156 53 32 chr17 19386095 19386378 -70118175 + AluJo SINE Alu 1 289 -23 1836 207 49 36 chr17 19386378 19386439 -70118114 + L1ME2 LINE L1 6096 6155 -9 1880 118 44 0 chr17 19386444 19386757 -70117796 - AluSx SINE Alu 0 325 1 524 181 45 196 chr17 19386766 19386834 -70117719 + L1MC5 LINE L1 7640 7717 -244 2201 108 3 0 chr17 19386834 19387131 -70117422 + AluSg SINE Alu 1 298 -12 524 181 45 196 chr17 19387131 19387399 -70117154 + L1MC5 LINE L1 7717 7925 -36 250 331 74 16 chr17 19387408 19387529 -70117024 + MIR SINE MIR 55 182 -80 216 333 287 0 chr17 19387678 19387852 -70116701 - MIR SINE MIR -6 256 33 230 191 16 16 chr17 19388964 19389027 -70115526 + (CAGCC)n Simple_repeat Simple_repeat 1 63 0 1378 162 0 0 chr17 19389904 19390120 -70114433 + AluJo SINE Alu 86 301 -11 820 180 0 0 chr17 19390684 19390823 -70113730 - FLAM_C SINE Alu 0 143 5 473 282 163 28 chr17 19390827 19391146 -70113407 - L1ME2 LINE L1 -56 6108 5747 201 191 0 48 chr17 19392411 19392453 -70112100 + L2 LINE L2 3229 3268 -4 182 318 32 0 chr17 19393212 19393275 -70111278 - MIR SINE MIR -108 154 90 2314 109 0 0 chr17 19393516 19393827 -70110726 - AluSx SINE Alu -1 311 1 246 311 0 75 chr17 19394229 19394335 -70110218 - MIR SINE MIR -47 215 118 308 176 95 14 chr17 19394586 19394660 -70109893 + MER5A DNA MER1_type 14 93 -96 2076 133 0 0 chr17 19395115 19395409 -70109144 - AluSq SINE Alu -19 294 1 298 301 66 7 chr17 19395677 19395813 -70108740 - MIR SINE MIR -62 200 57 208 413 10 20 chr17 19395765 19395816 -70108737 + MIR3 SINE MIR 7 57 -151 * 2220 78 58 0 chr17 19395816 19396110 -70108443 - AluSq SINE Alu -2 311 1 208 413 10 20 chr17 19396110 19396259 -70108294 + MIR3 SINE MIR 57 205 -3 249 346 19 0 chr17 19399025 19399132 -70105421 - L2 LINE L2 -238 3034 2926 372 59 0 0 chr17 19399193 19399244 -70105309 + (TCC)n Simple_repeat Simple_repeat 3 53 0 2275 69 14 0 chr17 19400100 19400391 -70104162 - AluSp SINE Alu -18 295 1 1503 162 33 53 chr17 19400567 19400729 -70103824 - AluJo SINE Alu -16 296 132 186 43 0 0 chr17 19400729 19400752 -70103801 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2155 83 0 0 chr17 19400752 19401018 -70103535 - AluSg SINE Alu -28 282 17 1503 162 33 53 chr17 19401018 19401156 -70103397 - AluJo SINE Alu -178 134 1 439 287 23 0 chr17 19401172 19401301 -70103252 - L1MD3 LINE L1 -11 7984 7853 1896 198 100 0 chr17 19402059 19402499 -70102054 - MER6 DNA MER2_type -350 515 32 233 324 36 9 chr17 19402525 19402636 -70101917 + L1MC/D LINE L1 5654 5767 -2041 1695 91 5 0 chr17 19403467 19403688 -70100865 + AluSx SINE Alu 1 222 -90 1388 82 0 0 chr17 19403688 19403870 -70100683 + AluSg/x SINE Alu 111 292 -18 2259 103 0 6 chr17 19406150 19406462 -70098091 - AluSx SINE Alu -2 310 1 541 316 13 0 chr17 19406598 19406756 -70097797 - MIR SINE MIR -39 223 64 180 276 40 26 chr17 19407523 19407599 -70096954 - L2 LINE L2 -15 3257 3181 2194 112 0 0 chr17 19407925 19408220 -70096333 - AluSx SINE Alu -17 295 1 257 284 0 15 chr17 19409131 19409198 -70095355 + L2 LINE L2 3206 3271 -1 1489 176 39 20 chr17 19409606 19409723 -70094830 + AluJo SINE Alu 1 114 -198 252 59 0 0 chr17 19409723 19409757 -70094796 + (CA)n Simple_repeat Simple_repeat 1 34 0 1489 176 39 20 chr17 19409757 19409771 -70094782 + AluJo SINE Alu 114 126 -186 2264 112 0 3 chr17 19409771 19410083 -70094470 + AluSq SINE Alu 1 311 -2 1489 176 39 20 chr17 19410083 19410256 -70094297 + AluJo SINE Alu 126 312 0 285 269 13 13 chr17 19410634 19410712 -70093841 - MIR SINE MIR -59 149 72 354 241 161 0 chr17 19410863 19410975 -70093578 - MIR SINE MIR -109 153 24 264 331 95 41 chr17 19411289 19411458 -70093095 - MIR3 SINE MIR -13 195 18 222 366 90 0 chr17 19412735 19412869 -70091684 - MIR SINE MIR -6 256 111 220 351 14 0 chr17 19413178 19413252 -70091301 - MIR SINE MIR -124 138 64 2118 129 7 0 chr17 19414075 19414377 -70090176 + AluSx SINE Alu 1 304 -8 245 267 92 23 chr17 19415947 19416078 -70088475 - MIR3 SINE MIR -12 196 57 333 109 0 0 chr17 19419567 19419622 -70084931 + (CA)n Simple_repeat Simple_repeat 2 56 0 310 282 126 0 chr17 19420048 19420151 -70084402 - MIR3 SINE MIR -8 200 85 237 132 0 0 chr17 19420364 19420402 -70084151 + (TCC)n Simple_repeat Simple_repeat 1 38 0 321 204 34 23 chr17 19420606 19420694 -70083859 + MER81 DNA DNA 1 89 -25 190 321 19 0 chr17 19421639 19421692 -70082861 - L2 LINE L2 -11 3261 3208 397 268 63 0 chr17 19421915 19422042 -70082511 + MER20 DNA MER1_type 27 161 -58 268 264 0 0 chr17 19422739 19422792 -70081761 + L2 LINE L2 3219 3271 -1 545 255 240 19 chr17 19423196 19423244 -70081309 + L2 LINE L2 2245 2281 -1032 1667 177 33 3 chr17 19423244 19423544 -70081009 - AluJb SINE Alu -3 309 1 545 255 240 19 chr17 19423544 19424145 -70080408 + L2 LINE L2 2281 3059 -254 230 278 237 0 chr17 19424293 19424390 -70080163 + MIR SINE MIR 106 225 -37 2308 95 0 0 chr17 19424451 19424747 -70079806 + AluSx SINE Alu 1 296 -16 1874 118 61 17 chr17 19424747 19425044 -70079509 + AluSg SINE Alu 1 310 0 999 194 45 0 chr17 19425070 19425271 -70079282 - MER2 DNA MER2_type -135 210 1 1652 141 0 0 chr17 19425326 19425575 -70078978 - AluJb SINE Alu -12 300 52 189 0 0 0 chr17 19425789 19425810 -70078743 + (A)n Simple_repeat Simple_repeat 1 21 0 2379 88 0 3 chr17 19425858 19426165 -70078388 - AluSx SINE Alu -6 306 1 988 228 186 42 chr17 19426554 19426984 -70077569 - MLT1D LTR MaLR -7 498 7 249 265 31 0 chr17 19428908 19429012 -70075541 + L1ME LINE L1 5355 5459 -703 2583 37 0 0 chr17 19429279 19429578 -70074975 + AluY SINE Alu 1 299 -12 736 85 0 0 chr17 19429717 19429811 -70074742 - AluJo/FRAM SINE Alu -16 296 203 1487 115 115 4 chr17 19429811 19430046 -70074507 + AluJo SINE Alu 35 295 -17 33 0 0 0 chr17 19430046 19430079 -70074474 + AT_rich Low_complexity Low_complexity 1 33 0 34 60 0 24 chr17 19430131 19430174 -70074379 + AT_rich Low_complexity Low_complexity 1 43 -39 846 73 0 18 chr17 19430174 19430283 -70074270 + U6 snRNA snRNA 1 107 0 1493 72 16 0 chr17 19430283 19430477 -70074076 + L1PA7 LINE L1 5953 6149 -5 34 60 0 24 chr17 19430477 19430516 -70074037 + AT_rich Low_complexity Low_complexity 41 82 0 2236 97 10 0 chr17 19430939 19431239 -70073314 + AluSx SINE Alu 1 303 -9 198 103 0 0 chr17 19431623 19431652 -70072901 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 2120 96 3 0 chr17 19431761 19432043 -70072510 + AluSg SINE Alu 21 303 -7 2259 103 0 0 chr17 19434325 19434626 -70069927 + AluSg SINE Alu 1 301 -9 2185 102 3 3 chr17 19434637 19434942 -70069611 + AluSq SINE Alu 1 305 -8 218 293 83 45 chr17 19435036 19435169 -70069384 + MIR SINE MIR 15 152 -110 2450 68 0 7 chr17 19435695 19436004 -70068549 - AluY SINE Alu -4 307 1 816 172 0 21 chr17 19436008 19436153 -70068400 - AluJb SINE Alu -170 142 1 297 369 60 0 chr17 19436356 19436524 -70068029 + MIR SINE MIR 81 258 -4 2324 94 0 0 chr17 19436599 19436908 -70067645 + AluSx SINE Alu 1 309 -3 386 217 22 0 chr17 19436920 19437012 -70067541 + L1M4 LINE L1 2482 2575 -3571 2376 57 3 7 chr17 19437344 19437642 -70066911 + AluY SINE Alu 1 297 -14 1150 56 25 0 chr17 19437682 19437843 -70066710 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 2148 259 139 17 chr17 19437950 19438264 -70066289 + L1M4 LINE L1 2711 2985 -3161 2270 119 0 0 chr17 19438264 19438576 -70065977 + AluSx SINE Alu 1 312 0 2148 259 139 17 chr17 19438576 19439123 -70065430 + L1M4 LINE L1 2985 3733 -2413 1745 123 41 38 chr17 19439123 19439247 -70065306 + AluSx SINE Alu 1 123 -189 216 0 0 0 chr17 19439247 19439271 -70065282 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1745 123 41 38 chr17 19439271 19439439 -70065114 + AluSx SINE Alu 123 294 -18 2148 259 139 17 chr17 19439439 19439655 -70064898 + L1M4 LINE L1 3733 3921 -2225 2236 100 0 3 chr17 19440504 19440805 -70063748 - AluSp SINE Alu -13 300 1 25 0 0 0 chr17 19440815 19440840 -70063713 + AT_rich Low_complexity Low_complexity 1 25 0 322 167 26 135 chr17 19440981 19441137 -70063416 + Charlie5 DNA MER1_type 2445 2583 -29 231 278 65 19 chr17 19441668 19441776 -70062777 + L1ME3A LINE L1 6053 6165 -5 345 291 299 11 chr17 19443783 19444157 -70060396 - L2 LINE L2 -1 3312 2831 2191 92 3 0 chr17 19444187 19444481 -70060072 + AluSx SINE Alu 1 295 -17 1952 89 0 0 chr17 19445324 19445571 -70058982 + AluSg SINE Alu 13 259 -51 2252 88 14 0 chr17 19445573 19445868 -70058685 + AluSg SINE Alu 1 299 -11 507 354 95 29 chr17 19445915 19446231 -70058322 - L3 LINE CR1 -3 1574 1238 223 264 149 0 chr17 19446471 19446558 -70057995 + MIR SINE MIR 152 251 -11 1824 147 3 29 chr17 19446561 19446873 -70057680 + AluJo SINE Alu 1 304 -8 502 296 98 53 chr17 19447497 19447819 -70056734 + L2 LINE L2 2883 3222 -91 2226 105 0 3 chr17 19447819 19448123 -70056430 - AluSx SINE Alu -9 303 1 502 296 98 53 chr17 19448123 19448138 -70056415 + L2 LINE L2 3222 3235 -78 556 167 0 0 chr17 19448153 19448237 -70056316 - FRAM/FAM SINE Alu -95 81 1 2134 98 3 20 chr17 19448248 19448545 -70056008 - AluSx SINE Alu -20 292 1 342 250 73 10 chr17 19448546 19448642 -70055911 + L2 LINE L2 3208 3309 -4 334 225 79 11 chr17 19448647 19448736 -70055817 + MIR3 SINE MIR 64 158 -50 2150 114 3 3 chr17 19448784 19449082 -70055471 + AluSq SINE Alu 1 298 -15 1867 145 3 3 chr17 19449093 19449418 -70055135 + AluJb SINE Alu 1 325 0 549 279 84 11 chr17 19449431 19449621 -70054932 - MIR SINE MIR 0 262 59 414 229 236 0 chr17 19449650 19449807 -70054746 + L2 LINE L2 2782 2975 -339 409 224 47 94 chr17 19449896 19449983 -70054570 + L1MEc LINE L1 1541 1631 -4765 2158 84 24 7 chr17 19449983 19450279 -70054274 + AluSc SINE Alu 1 301 -8 409 224 47 94 chr17 19450279 19450290 -70054263 + L1MEc LINE L1 1631 1641 -4755 2311 108 0 0 chr17 19450290 19450597 -70053956 + AluSx SINE Alu 1 307 -5 409 224 47 94 chr17 19450597 19450751 -70053802 + L1MEc LINE L1 1641 1782 -4614 564 267 128 0 chr17 19450833 19451028 -70053525 + L1MEc LINE L1 2628 2847 -3368 1237 74 51 0 chr17 19451036 19451211 -70053342 - AluSp SINE Alu -16 297 114 686 196 0 23 chr17 19451250 19451383 -70053170 - FLAM_C SINE Alu -3 130 1 1853 149 14 10 chr17 19451810 19452105 -70052448 + AluJb SINE Alu 1 296 -16 331 207 81 46 chr17 19452105 19452192 -70052361 - L1M4 LINE L1 -3273 2873 2784 2092 103 30 0 chr17 19452192 19452493 -70052060 + AluSx SINE Alu 1 310 -2 2015 79 65 0 chr17 19452498 19452777 -70051776 + AluSp SINE Alu 1 297 -16 2219 87 0 3 chr17 19453192 19453512 -70051041 + AluY SINE Alu 1 311 0 1986 131 0 17 chr17 19453609 19453745 -70050808 + AluSx SINE Alu 2 139 -173 2204 108 0 13 chr17 19453745 19454095 -70050458 + AluSc SINE Alu 1 309 0 1986 131 0 17 chr17 19454095 19454256 -70050297 + AluSx SINE Alu 139 294 -18 1332 234 130 25 chr17 19454258 19454772 -70049781 - L1MC4 LINE L1 0 8042 7475 221 303 15 0 chr17 19455279 19455345 -70049208 + MIR3 SINE MIR 104 170 -38 239 279 29 0 chr17 19455374 19455442 -70049111 - MER20B DNA MER1_type -605 178 109 277 310 142 9 chr17 19455610 19455723 -70048830 - MIR SINE MIR -119 143 16 585 308 76 0 chr17 19456230 19456428 -70048125 + MIR SINE MIR 47 259 -3 257 330 6 6 chr17 19456860 19457036 -70047517 + (TG)n Simple_repeat Simple_repeat 2 177 0 706 102 92 0 chr17 19457124 19457222 -70047331 - AluSq/x SINE Alu -204 109 3 2519 144 34 32 chr17 19457224 19457758 -70046795 - L1MB7 LINE L1 -357 5827 5293 247 295 36 36 chr17 19458515 19458627 -70045926 + L2 LINE L2 2715 2826 -488 218 180 90 90 chr17 19458638 19458727 -70045826 - L2 LINE L2 -2 3270 3182 216 345 94 34 chr17 19458804 19459039 -70045514 + L2 LINE L2 2852 3100 -172 2210 125 0 0 chr17 19459079 19459382 -70045171 - AluSx SINE Alu -9 303 1 945 143 17 122 chr17 19459566 19459586 -70044967 + MER20 DNA MER1_type 4 25 -194 2190 93 0 3 chr17 19459586 19459876 -70044677 - AluSg SINE Alu -14 296 8 945 143 17 122 chr17 19459876 19459891 -70044662 + MER20 DNA MER1_type 25 40 -179 297 0 0 0 chr17 19459891 19459924 -70044629 + (CA)n Simple_repeat Simple_repeat 1 33 0 945 143 17 122 chr17 19459924 19460047 -70044506 + MER20 DNA MER1_type 40 133 -86 2429 81 0 0 chr17 19460047 19460355 -70044198 + AluY SINE Alu 1 308 -3 945 143 17 122 chr17 19460355 19460431 -70044122 + MER20 DNA MER1_type 133 215 -4 954 255 95 26 chr17 19460809 19461189 -70043364 + MLT1J2 LTR MaLR 44 449 -1 207 349 66 0 chr17 19461461 19461567 -70042986 + L2 LINE L2 3151 3263 -9 669 181 0 9 chr17 19461630 19461746 -70042807 - AluJo/FRAM SINE Alu -15 297 183 1267 164 91 17 chr17 19461749 19461981 -70042572 - AluJo SINE Alu -59 253 5 583 290 79 38 chr17 19462171 19462461 -70042092 - MLT1L LTR MaLR -180 435 134 8582 44 12 0 chr17 19462470 19463427 -70041126 - LTR5 LTR ERVK 0 969 1 395 338 19 7 chr17 19464071 19464225 -70040328 - MIR SINE MIR 0 262 107 550 277 7 14 chr17 19464301 19464449 -70040104 + MIR SINE MIR 105 251 -11 296 211 42 42 chr17 19464449 19464544 -70040009 - MIR SINE MIR -104 158 64 402 82 0 16 chr17 19464545 19464599 -70039954 + Alu SINE Alu 1 55 -253 2239 76 35 10 chr17 19464599 19464888 -70039665 + AluSq SINE Alu 11 306 -7 859 253 37 72 chr17 19465369 19465824 -70038729 + L1MC5 LINE L1 7221 7659 -302 1679 182 34 0 chr17 19465825 19466116 -70038437 - AluJb SINE Alu -11 301 1 935 201 5 27 chr17 19466137 19466321 -70038232 + AluJo SINE Alu 117 296 -16 2321 101 16 3 chr17 19466321 19466629 -70037924 + AluSq SINE Alu 1 312 -1 4862 111 4 21 chr17 19466662 19467098 -70037455 - L1PB3 LINE L1 -38 6116 5674 2150 143 7 0 chr17 19467098 19467406 -70037147 - AluSx SINE Alu -2 310 1 4862 111 4 21 chr17 19467406 19467490 -70037063 - L1PB3 LINE L1 -480 5674 5590 2394 97 0 3 chr17 19467490 19467801 -70036752 - AluSp SINE Alu -3 310 1 4862 111 4 21 chr17 19467801 19468042 -70036511 - L1PB3 LINE L1 -564 5590 5367 4802 120 6 45 chr17 19468050 19468549 -70036004 - L1MC1 LINE L1 -13 6320 5803 2161 71 43 11 chr17 19468549 19468829 -70035724 - AluSx SINE Alu -7 305 17 4802 120 6 45 chr17 19468829 19468850 -70035703 - L1MC1 LINE L1 -530 5803 5783 2233 107 4 0 chr17 19468850 19469155 -70035398 - AluSp SINE Alu 0 306 1 4802 120 6 45 chr17 19469155 19469463 -70035090 - L1MC1 LINE L1 -550 5783 5522 644 113 15 88 chr17 19469463 19469494 -70035059 + L1MCa LINE L1 2223 2255 -4171 727 106 68 68 chr17 19469494 19469626 -70034927 + FLAM_C SINE Alu 1 132 -1 644 113 15 88 chr17 19469626 19469687 -70034866 + L1MCa LINE L1 2255 2319 -4107 2361 101 0 0 chr17 19469687 19469975 -70034578 + AluSg SINE Alu 1 288 -22 644 113 15 88 chr17 19469975 19470085 -70034468 + L1MCa LINE L1 2319 2411 -4015 2305 116 0 0 chr17 19470185 19470488 -70034065 - AluSx SINE Alu -9 303 1 397 167 0 0 chr17 19470488 19470570 -70033983 + L1MCa LINE L1 2415 2478 -3948 2405 106 3 0 chr17 19470570 19470882 -70033671 + AluSp SINE Alu 1 313 0 197 62 0 31 chr17 19470890 19470922 -70033631 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 1512 268 13 15 chr17 19470948 19471492 -70033061 + L1MCa LINE L1 2513 3056 -3370 2059 108 59 0 chr17 19471492 19471779 -70032774 + AluSq SINE Alu 1 304 -9 1512 268 13 15 chr17 19471779 19471803 -70032750 + L1MCa LINE L1 3056 3079 -3347 1922 182 3 6 chr17 19471803 19472116 -70032437 + AluJb SINE Alu 1 312 0 1512 268 13 15 chr17 19472116 19472206 -70032347 + L1MCa LINE L1 3079 3320 -3106 2065 153 0 0 chr17 19472208 19472503 -70032050 + AluSx SINE Alu 1 295 -17 231 43 106 0 chr17 19472503 19472550 -70032003 + GA-rich Low_complexity Low_complexity 1 52 0 434 216 155 0 chr17 19472552 19472668 -70031885 + L1MCa LINE L1 3309 3442 -2984 2381 107 0 0 chr17 19472685 19472994 -70031559 + AluSx SINE Alu 1 309 -3 638 135 0 35 chr17 19472998 19473139 -70031414 + (GGAGAA)n Simple_repeat Simple_repeat 4 139 0 210 362 28 35 chr17 19473370 19473511 -70031042 - L2 LINE L2 -51 3262 3123 1179 145 92 46 chr17 19473822 19474043 -70030510 - L1MB5 LINE L1 0 6174 5965 2342 122 0 0 chr17 19474043 19474355 -70030198 - AluSx SINE Alu 0 312 1 1760 149 45 14 chr17 19474357 19474646 -70029907 - AluJb SINE Alu -14 298 1 1179 145 92 46 chr17 19474646 19474704 -70029849 - L1MB5 LINE L1 -209 5965 5879 1995 106 64 0 chr17 19474723 19475011 -70029542 - AluSx SINE Alu 0 305 1 2232 122 3 0 chr17 19475011 19475314 -70029239 - AluSx SINE Alu -8 304 1 269 280 79 9 chr17 19475379 19475593 -70028960 - L2 LINE L2 -706 2608 2380 2234 97 19 16 chr17 19475880 19476191 -70028362 + AluSx SINE Alu 1 312 0 357 346 31 15 chr17 19476245 19476375 -70028178 - MER91C DNA MER1_type 0 140 9 457 224 26 72 chr17 19476905 19477057 -70027496 + MIR3 SINE MIR 27 171 -37 234 136 0 0 chr17 19477128 19477172 -70027381 + (CA)n Simple_repeat Simple_repeat 2 45 0 2336 85 7 16 chr17 19477183 19477488 -70027065 - AluSq SINE Alu -5 308 7 246 319 44 0 chr17 19478337 19478428 -70026125 - MIR3 SINE MIR -21 187 93 182 262 0 0 chr17 19478483 19478525 -70026028 + MIR SINE MIR 112 153 -109 1294 205 6 116 chr17 19478929 19479113 -70025440 - AluSp SINE Alu -5 308 105 2312 104 0 13 chr17 19479113 19479420 -70025133 - AluSx SINE Alu -9 303 1 1294 205 6 116 chr17 19479420 19479432 -70025121 - AluSp SINE Alu -208 105 93 2327 108 0 0 chr17 19479432 19479727 -70024826 - AluSg SINE Alu -15 295 1 1294 205 6 116 chr17 19479727 19479875 -70024678 - AluSp SINE Alu -220 93 1 2361 75 6 43 chr17 19479901 19480223 -70024330 + AluSg SINE Alu 1 310 0 332 392 18 18 chr17 19480482 19480653 -70023900 - L1M4 LINE L1 -744 5402 5232 2045 185 28 59 chr17 19480653 19480683 -70023870 - L1MB5 LINE L1 -14 6160 6131 1866 126 81 3 chr17 19480683 19480968 -70023585 - AluJo SINE Alu -5 307 1 2045 185 28 59 chr17 19480968 19481231 -70023322 - L1MB5 LINE L1 -43 6131 5887 2473 78 0 7 chr17 19481231 19481540 -70023013 - AluSq SINE Alu -5 308 2 2045 185 28 59 chr17 19481540 19481753 -70022800 - L1MB5 LINE L1 -287 5887 5669 2167 146 0 0 chr17 19481753 19482062 -70022491 - AluSx SINE Alu -3 309 1 1225 178 20 24 chr17 19482070 19482170 -70022383 - L1MB5 LINE L1 -657 5517 5418 2168 104 17 3 chr17 19482170 19482467 -70022086 - AluSx SINE Alu -11 301 1 1225 178 20 24 chr17 19482467 19482700 -70021853 - L1MB5 LINE L1 -756 5418 5184 1849 156 3 36 chr17 19483062 19483201 -70021352 + AluSg SINE Alu 1 143 -167 1987 130 0 10 chr17 19483201 19483493 -70021060 + AluSx SINE Alu 5 293 -19 1849 156 3 36 chr17 19483493 19483655 -70020898 + AluSg SINE Alu 143 292 -18 3151 147 103 7 chr17 19483762 19484825 -70019728 - LTR12 LTR ERV1 0 2427 1 2009 135 7 4 chr17 19485702 19486016 -70018537 - AluSq SINE Alu 0 315 1 443 293 33 0 chr17 19486064 19486214 -70018339 - L2 LINE L2 -240 3073 2919 1969 144 3 10 chr17 19486591 19486890 -70017663 - AluJb SINE Alu -15 297 1 181 209 0 119 chr17 19486929 19486996 -70017557 - L2 LINE L2 0 3272 3214 235 231 19 0 chr17 19487085 19487137 -70017416 + MLT1D LTR MaLR 10 62 -443 300 122 20 0 chr17 19487143 19487192 -70017361 + MSTC LTR MaLR 1 50 -346 1929 64 64 24 chr17 19487193 19487443 -70017110 + AluY SINE Alu 40 299 -12 818 141 0 25 chr17 19487454 19487575 -70016978 + FLAM_C SINE Alu 1 118 -25 1046 172 88 78 chr17 19487599 19487919 -70016634 + MSTC LTR MaLR 52 428 0 5542 213 92 47 chr17 19487921 19488592 -70015961 + MSTC-int LTR MaLR 2 641 -1094 2225 103 0 4 chr17 19488592 19488909 -70015644 + AluSg SINE Alu 1 316 0 5542 213 92 47 chr17 19488909 19489542 -70015011 + MSTC-int LTR MaLR 641 1401 -334 2222 76 0 0 chr17 19489542 19489804 -70014749 + AluSc SINE Alu 3 264 -45 5542 213 92 47 chr17 19489804 19490154 -70014399 + MSTC-int LTR MaLR 1401 1734 -1 862 254 91 53 chr17 19490155 19490319 -70014234 + MSTD LTR MaLR 1 157 -239 1621 175 7 34 chr17 19490319 19490616 -70013937 + AluJb SINE Alu 1 289 -23 862 254 91 53 chr17 19490616 19490825 -70013728 + MSTD LTR MaLR 157 388 -8 1256 191 73 73 chr17 19490829 19490962 -70013591 + MLT1D LTR MaLR 66 198 -307 2281 110 0 13 chr17 19490962 19491098 -70013455 + AluSq SINE Alu 1 137 -176 2480 87 0 0 chr17 19491098 19491396 -70013157 + AluSg SINE Alu 1 298 -12 2281 110 0 13 chr17 19491396 19491568 -70012985 + AluSq SINE Alu 137 305 -8 1256 191 73 73 chr17 19491568 19491874 -70012679 + MLT1D LTR MaLR 197 505 0 199 344 96 8 chr17 19491931 19492056 -70012497 + L2 LINE L2 3136 3271 -1 2544 78 0 0 chr17 19492140 19492449 -70012104 + AluY SINE Alu 1 309 -2 1662 110 80 67 chr17 19492613 19492912 -70011641 + AluSx SINE Alu 1 303 -9 290 224 66 0 chr17 19493319 19493395 -70011158 - MIR SINE MIR -68 140 60 269 240 53 0 chr17 19493817 19493892 -70010661 - L3 LINE CR1 -75 1502 1424 442 277 8 8 chr17 19494166 19494285 -70010268 + L2 LINE L2 2943 3061 -252 311 133 150 0 chr17 19494497 19494557 -70009996 - LTR16C LTR ERVL -10 481 413 1798 179 13 19 chr17 19494574 19494886 -70009667 - AluJo SINE Alu 0 312 3 328 125 0 18 chr17 19494890 19494940 -70009613 + MLT1B LTR MaLR 22 70 -320 1137 185 64 54 chr17 19494940 19495039 -70009514 + MER2 DNA MER2_type 2 99 -246 2243 108 0 0 chr17 19495039 19495350 -70009203 + AluSq SINE Alu 1 311 0 1137 185 64 54 chr17 19495350 19495560 -70008993 + MER2 DNA MER2_type 99 317 -28 1367 172 17 92 chr17 19495572 19495921 -70008632 + MLT1B LTR MaLR 68 390 0 254 228 130 0 chr17 19495960 19496052 -70008501 - MIR SINE MIR -68 140 37 196 364 0 0 chr17 19496569 19496635 -70007918 - L2 LINE L2 -218 3054 2989 2822 174 82 62 chr17 19496637 19497011 -70007542 + L1MB5 LINE L1 5432 5797 -377 2072 123 3 7 chr17 19497011 19497326 -70007227 - AluSq SINE Alu 0 313 1 2822 174 82 62 chr17 19497326 19497351 -70007202 + L1MB5 LINE L1 5797 5820 -354 2344 90 3 10 chr17 19497351 19497652 -70006901 + AluSq SINE Alu 1 299 -14 2822 174 82 62 chr17 19497652 19497979 -70006574 + L1MB5 LINE L1 5820 6174 0 2297 85 16 31 chr17 19497990 19498307 -70006246 + AluSx SINE Alu 1 312 0 238 302 19 38 chr17 19498643 19498802 -70005751 + G-rich Low_complexity Low_complexity 6 161 0 841 278 48 0 chr17 19499173 19499400 -70005153 + MIR SINE MIR 25 262 0 326 290 0 10 chr17 19499427 19499527 -70005026 - MER5A DNA MER1_type -28 161 63 1968 165 0 0 chr17 19499529 19499820 -70004733 - AluJb SINE Alu -17 295 5 208 325 34 45 chr17 19499951 19500219 -70004334 - L2 LINE L2 -1219 2095 1831 1888 204 19 0 chr17 19500229 19500606 -70003947 + MLT1B LTR MaLR 1 384 -6 303 222 69 0 chr17 19500653 19500725 -70003828 + HAL1 LINE L1 850 926 -1581 2217 128 0 0 chr17 19500731 19501036 -70003517 - AluSq SINE Alu -8 305 1 1584 173 0 64 chr17 19501146 19501458 -70003095 + AluJo SINE Alu 1 292 -20 478 167 37 9 chr17 19501475 19501583 -70002970 + HAL1 LINE L1 964 1074 -1433 37 52 0 0 chr17 19501588 19501646 -70002907 + AT_rich Low_complexity Low_complexity 1 58 0 2192 249 86 66 chr17 19501700 19501743 -70002810 + HAL1 LINE L1 1088 1129 -1378 2222 131 10 0 chr17 19501743 19502049 -70002504 + AluSg SINE Alu 1 309 -1 2192 249 86 66 chr17 19502049 19502183 -70002370 + HAL1 LINE L1 1129 1259 -1248 2505 81 0 3 chr17 19502183 19502490 -70002063 + AluY SINE Alu 1 306 -5 2192 249 86 66 chr17 19502490 19502801 -70001752 + HAL1 LINE L1 1259 1562 -945 1958 144 20 34 chr17 19502801 19503119 -70001434 + MER7A DNA MER2_type 1 314 -2724 2820 10 0 0 chr17 19503119 19503438 -70001115 - AluY SINE Alu 0 319 1 1958 144 20 34 chr17 19503438 19503471 -70001082 + MER7A DNA MER2_type 314 346 0 2192 249 86 66 chr17 19503471 19503905 -70000648 + HAL1 LINE L1 1562 2038 -469 252 0 0 0 chr17 19503905 19503933 -70000620 + (CAAAC)n Simple_repeat Simple_repeat 3 30 0 2192 249 86 66 chr17 19503933 19504061 -70000492 + HAL1 LINE L1 2038 2162 -345 310 335 0 66 chr17 19504061 19504160 -70000393 - LTR16B LTR ERVL 0 464 377 2396 94 10 3 chr17 19504160 19504468 -70000085 + AluSq SINE Alu 1 310 -3 310 335 0 66 chr17 19504468 19504520 -70000033 - LTR16B LTR ERVL -87 377 323 1320 148 43 4 chr17 19504664 19504894 -69999659 - MSTB1 LTR MaLR -15 417 179 336 176 0 0 chr17 19504897 19504948 -69999605 + Alu SINE Alu 1 51 -252 8163 174 7 25 chr17 19504948 19505750 -69998803 - MST-int LTR MaLR -182 1469 653 2226 109 0 0 chr17 19505750 19506043 -69998510 - AluSx SINE Alu 0 312 20 8163 174 7 25 chr17 19506043 19506367 -69998186 - MST-int LTR MaLR -998 653 375 2043 152 10 0 chr17 19506367 19506670 -69997883 + AluJb SINE Alu 1 306 -6 8163 174 7 25 chr17 19506670 19507035 -69997518 - MST-int LTR MaLR -1276 375 5 461 72 14 0 chr17 19507037 19507106 -69997447 - MSTB LTR MaLR 0 432 363 2259 83 4 0 chr17 19507106 19507382 -69997171 + AluSp SINE Alu 1 277 -36 752 121 13 25 chr17 19507382 19507539 -69997014 + (GAAA)n Simple_repeat Simple_repeat 4 158 0 200 94 0 31 chr17 19507539 19507571 -69996982 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 802 191 31 13 chr17 19507571 19507837 -69996716 - MSTB LTR MaLR -64 362 55 189 0 0 0 chr17 19507849 19507870 -69996683 + (CA)n Simple_repeat Simple_repeat 1 21 0 180 0 0 0 chr17 19507870 19507890 -69996663 + (TG)n Simple_repeat Simple_repeat 2 21 0 2495 46 0 0 chr17 19507904 19508211 -69996342 + AluY SINE Alu 1 307 0 195 69 0 0 chr17 19508213 19508242 -69996311 + (TA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr17 19508397 19508423 -69996130 + (TA)n Simple_repeat Simple_repeat 2 27 0 2027 159 0 3 chr17 19508423 19508725 -69995828 - AluJo SINE Alu -11 301 1 416 159 0 0 chr17 19508725 19508794 -69995759 - MSTB LTR MaLR -357 69 1 631 213 63 31 chr17 19508803 19509053 -69995500 - MLT1C LTR MaLR 0 467 171 691 117 28 151 chr17 19509058 19509237 -69995316 - FRAM SINE Alu 0 176 20 340 164 148 82 chr17 19509241 19509363 -69995190 - MLT1C LTR MaLR -337 130 1 250 302 35 0 chr17 19509666 19509752 -69994801 + LTR67 LTR ERVL 96 184 -373 1871 124 44 7 chr17 19509862 19510135 -69994418 - AluSx SINE Alu -29 283 1 1815 154 0 11 chr17 19510171 19510450 -69994103 + AluJo SINE Alu 13 288 -24 5674 151 43 18 chr17 19510473 19510724 -69993829 + L1MC1 LINE L1 5082 5325 -1008 690 198 0 0 chr17 19510724 19510850 -69993703 + FLAM_A SINE Alu 4 129 -4 5674 151 43 18 chr17 19510850 19511098 -69993455 + L1MC1 LINE L1 5325 5565 -768 1386 181 23 85 chr17 19511098 19511497 -69993056 + MLT1A2 LTR MaLR 1 374 0 5674 151 43 18 chr17 19511497 19511894 -69992659 + L1MC1 LINE L1 5565 6016 -317 2314 108 3 3 chr17 19511894 19512199 -69992354 + AluSg SINE Alu 1 305 -5 5674 151 43 18 chr17 19512199 19512526 -69992027 + L1MC1 LINE L1 6016 6333 0 649 259 82 27 chr17 19512541 19512835 -69991718 - MLT1I LTR MaLR -65 344 35 306 180 0 0 chr17 19512907 19512968 -69991585 + (CA)n Simple_repeat Simple_repeat 1 61 0 2295 101 0 9 chr17 19513092 19513408 -69991145 + AluSq SINE Alu 1 313 0 1081 258 5 15 chr17 19513589 19513882 -69990671 - L1ME1 LINE L1 -7 6159 5823 2236 95 7 0 chr17 19513882 19514178 -69990375 - AluSp SINE Alu -15 298 1 1081 258 5 15 chr17 19514178 19514274 -69990279 - L1ME1 LINE L1 -343 5823 5728 584 268 197 21 chr17 19514324 19514709 -69989844 + L2 LINE L2 2855 3307 -6 213 226 172 11 chr17 19514770 19514863 -69989690 - MIR SINE MIR -56 152 45 222 225 31 39 chr17 19514927 19515056 -69989497 + (CA)n Simple_repeat Simple_repeat 2 129 0 463 315 0 35 chr17 19515404 19515631 -69988922 - MIR SINE MIR -29 233 16 323 316 103 26 chr17 19515736 19515853 -69988700 + L3 LINE CR1 1413 1538 -39 301 248 161 15 chr17 19515910 19516047 -69988506 - MLT1K LTR MaLR -111 477 321 365 350 56 12 chr17 19516198 19516358 -69988195 - MIR SINE MIR -8 254 88 212 243 68 27 chr17 19516558 19516632 -69987921 + MIR SINE MIR 74 150 -58 2010 116 0 4 chr17 19516782 19517057 -69987496 + AluSg SINE Alu 1 274 -36 189 0 0 0 chr17 19517065 19517086 -69987467 + (CA)n Simple_repeat Simple_repeat 2 22 0 320 234 0 0 chr17 19517086 19517163 -69987390 + MER3 DNA MER1_type 129 205 -4 2273 97 3 6 chr17 19517448 19517759 -69986794 + AluSx SINE Alu 1 310 -2 1343 263 72 41 chr17 19518164 19518651 -69985902 - MLT1D LTR MaLR -1 504 3 350 340 51 6 chr17 19519001 19519157 -69985396 - MIR SINE MIR -80 182 20 738 268 222 14 chr17 19519851 19520603 -69983950 + L2 LINE L2 2401 3313 0 225 154 0 0 chr17 19520690 19520729 -69983824 + (CA)n Simple_repeat Simple_repeat 1 39 0 279 264 0 0 chr17 19521385 19521514 -69983039 + C-rich Low_complexity Low_complexity 4 132 0 229 317 117 0 chr17 19521885 19522005 -69982548 + MIR SINE MIR 117 250 -12 196 233 0 0 chr17 19522381 19522424 -69982129 + MIR SINE MIR 32 74 -188 709 253 52 34 chr17 19522440 19522673 -69981880 + MLT1D LTR MaLR 9 245 -260 690 162 87 12 chr17 19522674 19522843 -69981710 + MLT1D LTR MaLR 332 505 0 329 284 29 0 chr17 19522848 19522950 -69981603 + MIR SINE MIR 116 220 -42 602 303 48 68 chr17 19522989 19523326 -69981227 - L2 LINE L2 -73 3199 2870 259 291 0 35 chr17 19523605 19523691 -69980862 - MIR SINE MIR 0 262 180 513 274 133 33 chr17 19524295 19524536 -69980017 - L3 LINE CR1 -104 1473 1209 616 228 101 5 chr17 19524556 19524745 -69979808 - MLT1K LTR MaLR -8 580 374 531 289 32 11 chr17 19524813 19525000 -69979553 - MLT1K LTR MaLR -355 233 43 281 252 126 0 chr17 19525006 19525117 -69979436 - MLT1J LTR MaLR 0 511 387 1957 212 7 30 chr17 19525663 19526027 -69978526 - MSTD LTR MaLR 0 396 40 1943 163 0 0 chr17 19526027 19526340 -69978213 + AluSq SINE Alu 1 313 0 1957 212 7 30 chr17 19526340 19526380 -69978173 - MSTD LTR MaLR -356 40 1 1331 165 0 119 chr17 19526695 19527022 -69977531 + AluSc SINE Alu 1 288 -21 242 311 86 43 chr17 19527300 19527468 -69977085 - MIR SINE MIR -51 211 37 234 279 47 4 chr17 19527528 19527600 -69976953 + MIR SINE MIR 88 161 -47 315 267 110 20 chr17 19527718 19527864 -69976689 + MIR3 SINE MIR 4 162 -46 420 20 0 0 chr17 19528141 19528190 -69976363 + (TG)n Simple_repeat Simple_repeat 2 50 0 194 170 0 21 chr17 19528289 19528336 -69976217 + T-rich Low_complexity Low_complexity 4 49 0 1931 154 7 0 chr17 19528338 19528516 -69976037 - AluJb SINE Alu -4 308 126 225 0 0 0 chr17 19528516 19528541 -69976012 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1931 154 7 0 chr17 19528541 19528667 -69975886 - AluJb SINE Alu -186 126 2 314 277 12 0 chr17 19529061 19529144 -69975409 + L2 LINE L2 3001 3084 -188 195 302 0 32 chr17 19529192 19529255 -69975298 + L2 LINE L2 3248 3308 -5 * 413 192 0 0 chr17 19529254 19529327 -69975226 + MIR SINE MIR 73 145 -63 1310 203 36 38 chr17 19529346 19529711 -69974842 + MLT1D LTR MaLR 82 445 -60 1221 149 0 25 chr17 19529711 19529912 -69974641 + AluSg/x SINE Alu 85 280 -32 282 87 0 0 chr17 19529912 19529958 -69974595 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 233 172 103 0 chr17 19529958 19530016 -69974537 + MLT1D LTR MaLR 442 505 0 1833 162 18 0 chr17 19530043 19530321 -69974232 + AluJo SINE Alu 1 283 -29 214 147 0 0 chr17 19530321 19530355 -69974198 + (CA)n Simple_repeat Simple_repeat 1 34 0 830 223 32 0 chr17 19530990 19531178 -69973375 - MIR SINE MIR -21 241 48 2142 129 3 0 chr17 19531182 19531493 -69973060 + AluSp SINE Alu 2 313 0 384 291 93 0 chr17 19531655 19531806 -69972747 + MIR SINE MIR 78 242 -20 606 288 75 21 chr17 19532101 19532341 -69972212 + L2 LINE L2 2723 2975 -339 731 181 0 0 chr17 19532346 19532462 -69972091 + FLAM_A SINE Alu 13 128 -14 381 294 52 66 chr17 19532531 19532742 -69971811 + L2 LINE L2 3077 3284 -29 180 111 0 0 chr17 19533095 19533122 -69971431 + (CCCG)n Simple_repeat Simple_repeat 4 30 0 30 77 0 0 chr17 19533175 19533240 -69971313 + GC_rich Low_complexity Low_complexity 1 65 0 31 0 0 0 chr17 19533368 19533399 -69971154 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 7 0 chr17 19533490 19533543 -69971010 + GC_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 19534523 19534551 -69970002 + GC_rich Low_complexity Low_complexity 1 28 0 196 326 12 47 chr17 19535504 19535561 -69968992 + L2 LINE L2 3136 3191 -81 1664 145 27 24 chr17 19535561 19535858 -69968695 - AluJo SINE Alu -14 298 1 196 326 12 47 chr17 19535858 19535886 -69968667 + L2 LINE L2 3191 3218 -54 726 245 80 8 chr17 19535888 19536125 -69968428 + MER112 DNA MER1_type 1 254 -2 305 294 103 35 chr17 19536208 19536357 -69968196 - L1ME4a LINE L1 -18 6103 5940 413 81 16 0 chr17 19536357 19536419 -69968134 + (TA)n Simple_repeat Simple_repeat 2 64 0 305 294 103 35 chr17 19536419 19536513 -69968040 - L1ME4a LINE L1 -181 5940 5854 587 249 123 33 chr17 19536536 19536752 -69967801 + MIR SINE MIR 40 262 0 221 344 81 24 chr17 19536943 19537229 -69967324 - L2 LINE L2 -12 3260 2902 357 323 144 29 chr17 19537285 19537861 -69966692 + L2 LINE L2 2608 3261 -11 369 0 0 0 chr17 19538254 19538295 -69966258 + (TG)n Simple_repeat Simple_repeat 1 41 0 1275 90 0 0 chr17 19538671 19538837 -69965716 - AluSg/x SINE Alu -14 295 130 323 244 139 26 chr17 19539286 19539401 -69965152 + MIR SINE MIR 16 143 -65 2170 102 14 0 chr17 19539437 19539732 -69964821 + AluSx SINE Alu 5 303 -9 238 248 310 9 chr17 19539775 19539888 -69964665 + MIR SINE MIR 5 151 -111 1635 101 9 4 chr17 19539888 19540116 -69964437 + AluSx SINE Alu 1 229 -83 206 174 0 43 chr17 19542030 19542076 -69962477 + (CGGGG)n Simple_repeat Simple_repeat 2 45 0 204 206 16 32 chr17 19543095 19543158 -69961395 + GA-rich Low_complexity Low_complexity 1 62 0 2288 91 0 13 chr17 19543477 19543786 -69960767 - AluSg SINE Alu -5 305 1 2082 104 0 23 chr17 19543844 19544151 -69960402 - AluSx SINE Alu -12 300 1 585 280 87 19 chr17 19544497 19544704 -69959849 + MIR SINE MIR 3 223 -39 2154 101 0 16 chr17 19544991 19545298 -69959255 + AluSx SINE Alu 1 302 -10 656 259 24 6 chr17 19545379 19545549 -69959004 + MIR SINE MIR 81 253 -9 184 288 51 68 chr17 19545685 19545803 -69958750 - MIR SINE MIR -72 136 21 304 294 83 28 chr17 19546006 19546026 -69958527 - L2 LINE L2 -35 3278 3261 1080 171 48 5 chr17 19546026 19546236 -69958317 + MER20 DNA MER1_type 1 219 0 304 294 83 28 chr17 19546236 19546395 -69958158 - L2 LINE L2 -52 3261 3089 191 246 29 14 chr17 19546425 19546494 -69958059 - L2 LINE L2 -339 2974 2905 194 67 0 33 chr17 19547278 19547308 -69957245 - L2 LINE L2 -23 3290 3262 521 291 7 7 chr17 19547320 19547461 -69957092 - MIR SINE MIR -101 161 21 264 224 75 0 chr17 19547634 19547701 -69956852 + MIR SINE MIR 118 189 -73 193 125 100 0 chr17 19548788 19548828 -69955725 + MIR SINE MIR 32 75 -187 25 0 0 0 chr17 19549703 19549728 -69954825 + GC_rich Low_complexity Low_complexity 1 25 0 1914 141 23 7 chr17 19550406 19550710 -69953843 - AluSx SINE Alu -3 309 1 260 325 0 98 chr17 19550783 19550946 -69953607 + L3b LINE CR1 1237 1383 -200 261 269 120 0 chr17 19551169 19551277 -69953276 - L1ME4a LINE L1 -2 6119 5999 260 299 112 37 chr17 19553688 19553822 -69950731 - L2 LINE L2 -10 3303 3160 577 279 88 25 chr17 19554750 19554954 -69949599 + MIR SINE MIR 1 217 -45 188 226 13 13 chr17 19554994 19555060 -69949493 + MIR SINE MIR 70 136 -72 21 0 0 0 chr17 19555291 19555312 -69949241 + GC_rich Low_complexity Low_complexity 1 21 0 183 129 0 0 chr17 19555513 19555544 -69949009 + (GGGGA)n Simple_repeat Simple_repeat 1 31 0 947 194 0 6 chr17 19556485 19556650 -69947903 - FRAM SINE Alu -13 163 1 251 343 157 36 chr17 19556764 19557012 -69947541 - L2 LINE L2 -49 3223 2946 484 335 63 0 chr17 19557412 19557570 -69946983 + L3 LINE CR1 468 635 -942 516 338 76 5 chr17 19557609 19557819 -69946734 - MIR SINE MIR -34 228 4 269 336 29 10 chr17 19557852 19557956 -69946597 + L2 LINE L2 3165 3270 -2 827 231 0 6 chr17 19558522 19558695 -69945858 - FRAM SINE Alu -5 171 1 267 307 118 0 chr17 19559130 19559257 -69945296 + MIR3 SINE MIR 45 186 -22 302 365 65 10 chr17 19559428 19559628 -69944925 + MIR SINE MIR 40 250 -12 405 298 58 45 chr17 19559670 19559912 -69944641 + MLT1I LTR MaLR 8 252 -157 366 230 32 6 chr17 19559929 19560033 -69944520 + MLT1I LTR MaLR 312 406 -3 189 0 0 0 chr17 19560036 19560057 -69944496 + (CAT)n Simple_repeat Simple_repeat 3 23 0 949 101 0 22 chr17 19560237 19560375 -69944178 + AluSq/x SINE Alu 1 135 -178 996 178 0 74 chr17 19560403 19560633 -69943920 + AluSg/x SINE Alu 83 296 -14 2491 66 0 0 chr17 19560633 19560937 -69943616 + AluSc SINE Alu 1 304 -5 996 178 0 74 chr17 19560937 19560948 -69943605 + AluSg/x SINE Alu 296 306 -4 347 244 84 38 chr17 19561778 19561909 -69942644 - L2 LINE L2 0 3272 3136 1185 153 0 0 chr17 19561958 19562134 -69942419 + AluJo SINE Alu 42 217 -95 251 174 0 0 chr17 19562136 19562182 -69942371 + FLAM SINE Alu 85 130 -3 900 246 36 17 chr17 19562197 19562489 -69942064 - L2 LINE L2 -176 3137 2837 1897 149 0 3 chr17 19562489 19562777 -69941776 - AluJb SINE Alu -19 293 7 198 209 0 0 chr17 19563289 19563332 -69941221 + (TA)n Simple_repeat Simple_repeat 1 43 0 757 219 0 0 chr17 19563334 19563462 -69941091 - FLAM_A SINE Alu -5 128 1 211 160 0 0 chr17 19563902 19563946 -69940607 - MIR SINE MIR -119 143 101 204 255 78 0 chr17 19565558 19565609 -69938944 - MIR3 SINE MIR -50 158 104 306 146 9 127 chr17 19565713 19565823 -69938730 - MIR SINE MIR -86 122 26 194 292 62 42 chr17 19566147 19566243 -69938310 + MIR3 SINE MIR 75 172 -36 346 328 25 5 chr17 19567769 19567970 -69936583 - L1ME4a LINE L1 -188 5933 5729 465 241 60 36 chr17 19568130 19568296 -69936257 - MIR3 SINE MIR -1 207 38 239 314 14 14 chr17 19568316 19568386 -69936167 - MIR3 SINE MIR -27 181 112 214 211 19 0 chr17 19568960 19569012 -69935541 + (TG)n Simple_repeat Simple_repeat 2 54 0 213 225 0 0 chr17 19569087 19569127 -69935426 + (TG)n Simple_repeat Simple_repeat 1 40 0 214 286 88 22 chr17 19569696 19569787 -69934766 - MIR SINE MIR -146 116 20 254 282 118 18 chr17 19570489 19570599 -69933954 + MIR SINE MIR 108 228 -34 420 308 93 11 chr17 19572990 19573172 -69931381 - MIR SINE MIR -19 243 47 260 301 0 0 chr17 19573564 19573637 -69930916 - MIR SINE MIR -79 183 111 268 204 245 27 chr17 19573852 19573999 -69930554 + Charlie8 DNA MER1_type 38 216 -2201 421 232 69 45 chr17 19574426 19574616 -69929937 - MIR3 SINE MIR -63 145 2 1040 164 0 0 chr17 19575227 19575392 -69929161 + AluJb SINE Alu 131 295 -17 384 267 11 120 chr17 19575908 19575992 -69928561 + L3 LINE CR1 1298 1390 -187 2199 104 0 3 chr17 19575992 19576289 -69928264 - AluSx SINE Alu -16 296 1 2368 73 0 10 chr17 19576289 19576592 -69927961 - AluSq SINE Alu -13 300 1 384 267 11 120 chr17 19576592 19576697 -69927856 + L3 LINE CR1 1388 1467 -110 236 218 26 13 chr17 19576886 19576964 -69927589 + (TG)n Simple_repeat Simple_repeat 2 80 0 245 306 47 0 chr17 19577546 19577631 -69926922 - MIR SINE MIR -78 130 42 315 203 0 0 chr17 19578074 19578153 -69926400 + (CA)n Simple_repeat Simple_repeat 1 79 0 180 219 0 0 chr17 19578224 19578265 -69926288 + GA-rich Low_complexity Low_complexity 2 42 0 212 209 0 0 chr17 19579293 19579336 -69925217 + L2 LINE L2 3270 3312 -1 462 65 0 0 chr17 19579398 19579460 -69925093 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 1589 171 0 4 chr17 19579976 19580239 -69924314 - AluJb SINE Alu -17 295 34 202 346 20 20 chr17 19580672 19580773 -69923780 + MER5A DNA MER1_type 47 147 -42 2413 70 3 13 chr17 19581489 19581802 -69922751 + AluSg SINE Alu 1 310 0 249 264 134 73 chr17 19582321 19582388 -69922165 - L2 LINE L2 -509 2805 2744 228 35 0 0 chr17 19582388 19582417 -69922136 + (TG)n Simple_repeat Simple_repeat 2 30 0 1577 99 149 11 chr17 19582417 19582679 -69921874 - AluSg1 SINE Alu -11 298 1 249 264 134 73 chr17 19582679 19582856 -69921697 - L2 LINE L2 -569 2745 2545 2501 70 3 0 chr17 19583605 19583917 -69920636 - AluSp SINE Alu 0 313 1 691 135 183 29 chr17 19584566 19584765 -69919788 - LTR8A LTR ERV1 -144 583 349 1755 150 7 4 chr17 19584765 19585039 -69919514 + AluJb SINE Alu 1 275 -37 432 133 48 12 chr17 19585039 19585122 -69919431 - THE1A LTR MaLR -76 279 194 229 219 0 208 chr17 19585184 19585376 -69919177 - L2 LINE L2 -93 3179 3028 328 348 32 19 chr17 19585426 19585584 -69918969 - MIR SINE MIR -12 250 91 223 252 23 28 chr17 19586435 19586548 -69918005 - MIR SINE MIR -51 211 101 201 298 35 26 chr17 19586556 19586670 -69917883 + L2 LINE L2 2862 2976 -337 430 280 6 64 chr17 19586714 19586871 -69917682 + L2 LINE L2 3166 3313 0 564 227 45 0 chr17 19587065 19587197 -69917356 - MLT1J2 LTR MaLR -289 161 24 2026 72 118 0 chr17 19587422 19587701 -69916852 + AluSp SINE Alu 1 312 -1 383 220 101 9 chr17 19588211 19588320 -69916233 - L2 LINE L2 -228 3044 2926 666 272 72 96 chr17 19588580 19589039 -69915514 + L2 LINE L2 2866 3313 0 24 0 0 0 chr17 19589178 19589202 -69915351 + GC_rich Low_complexity Low_complexity 1 24 0 206 155 14 84 chr17 19589312 19589383 -69915170 + (CGGGG)n Simple_repeat Simple_repeat 2 67 0 22 0 0 0 chr17 19589416 19589438 -69915115 + GC_rich Low_complexity Low_complexity 1 22 0 194 175 25 0 chr17 19589899 19589939 -69914614 + L2 LINE L2 3225 3265 -7 244 320 72 61 chr17 19590554 19590735 -69913818 - MER5A DNA MER1_type 0 189 7 237 274 0 0 chr17 19591028 19591079 -69913474 + MER91A DNA MER1_type 2 52 -144 1761 111 26 102 chr17 19591174 19591518 -69913035 - AluYb8 SINE Alu 0 318 1 224 254 0 16 chr17 19591857 19591920 -69912633 - MIR SINE MIR -105 157 96 193 273 50 93 chr17 19592043 19592204 -69912349 + L2 LINE L2 3030 3183 -89 2181 94 7 0 chr17 19593180 19593477 -69911076 - AluSp SINE Alu -13 300 2 359 304 67 7 chr17 19593628 19593763 -69910790 - L2 LINE L2 -9 3304 3162 207 279 0 49 chr17 19594903 19594964 -69909589 + MIR3 SINE MIR 99 156 -52 271 362 162 10 chr17 19595562 19596063 -69908490 - L2 LINE L2 -21 3251 2669 188 333 0 0 chr17 19596040 19596097 -69908456 - MIR SINE MIR -61 147 91 * 339 293 143 62 chr17 19596369 19596628 -69907925 - L1ME4a LINE L1 -8 6113 5834 269 328 16 49 chr17 19596679 19596801 -69907752 + L2 LINE L2 3191 3308 -5 214 343 112 15 chr17 19597016 19597150 -69907403 - L2 LINE L2 0 3272 3126 832 247 31 26 chr17 19597999 19598226 -69906327 + MIR SINE MIR 32 259 -3 195 314 149 35 chr17 19598371 19598632 -69905921 - L2 LINE L2 -16 3256 2966 550 277 171 28 chr17 19599085 19599406 -69905147 - L2 LINE L2 -79 3193 2827 245 276 79 0 chr17 19599500 19599576 -69904977 + MIR SINE MIR 41 122 -86 368 343 122 0 chr17 19600764 19601035 -69903518 - MLT1I LTR MaLR -8 401 98 203 300 43 0 chr17 19601149 19601219 -69903334 - L2 LINE L2 -541 2773 2701 620 202 84 17 chr17 19601220 19601398 -69903155 - L1ME3A LINE L1 0 6170 5981 1866 152 30 0 chr17 19601447 19601744 -69902809 - AluSx SINE Alu -1 311 6 870 117 70 0 chr17 19601747 19601875 -69902678 - AluSq/x SINE Alu -175 137 1 434 228 81 0 chr17 19601889 19602012 -69902541 - L1ME3A LINE L1 -304 5866 5734 638 122 143 0 chr17 19602028 19602126 -69902427 + FLAM_C SINE Alu 10 121 -22 315 309 8 57 chr17 19604372 19604615 -69899938 - L1ME4a LINE L1 -28 6093 5824 294 317 248 6 chr17 19604890 19605051 -69899502 + MIR SINE MIR 49 248 -14 185 360 40 30 chr17 19605069 19605169 -69899384 + MIR SINE MIR 141 241 -21 729 250 17 11 chr17 19605202 19605378 -69899175 + MER45A DNA AcHobo 1 177 -1 234 0 0 0 chr17 19608244 19608270 -69896283 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 315 330 166 27 chr17 19609154 19609867 -69894686 + L2 LINE L2 2425 3272 0 283 328 34 0 chr17 19609867 19609986 -69894567 + (TGGG)n Simple_repeat Simple_repeat 1 123 0 538 193 21 0 chr17 19609986 19610131 -69894422 + (TGGA)n Simple_repeat Simple_repeat 1 148 0 207 321 142 37 chr17 19610440 19610574 -69893979 + MIR3 SINE MIR 29 176 -32 35 24 0 0 chr17 19610894 19610936 -69893617 + AT_rich Low_complexity Low_complexity 1 42 0 402 199 0 0 chr17 19611000 19611090 -69893463 + MIR SINE MIR 66 156 -52 453 315 13 34 chr17 19611158 19611307 -69893246 - MIR SINE MIR -50 212 67 1616 187 4 0 chr17 19613328 19613596 -69890957 - AluJb SINE Alu -43 269 1 1364 125 125 18 chr17 19613618 19613899 -69890654 - Tigger2 DNA MER2_type -138 2580 2270 218 163 47 0 chr17 19614146 19614189 -69890364 + MIR SINE MIR 104 148 -60 279 265 145 16 chr17 19614255 19614379 -69890174 - MIR SINE MIR -63 145 7 237 263 140 64 chr17 19614442 19614472 -69890081 - L1MC4a LINE L1 -1875 5933 5907 1824 134 54 0 chr17 19614472 19614749 -69889804 - AluSx SINE Alu -20 292 1 1825 148 20 3 chr17 19614752 19615056 -69889497 - AluJo SINE Alu -3 309 1 237 263 140 64 chr17 19615056 19615257 -69889296 - L1MC4a LINE L1 -1902 5906 5680 315 318 16 16 chr17 19615269 19615395 -69889158 - L1MC4a LINE L1 -2188 5620 5495 406 297 174 0 chr17 19615470 19615625 -69888928 + MIR SINE MIR 50 231 -31 240 220 44 99 chr17 19615804 19615895 -69888658 - MIR3 SINE MIR -42 166 81 220 322 44 0 chr17 19616138 19616228 -69888325 + MER5A DNA MER1_type 16 109 -80 474 284 111 24 chr17 19616454 19616662 -69887891 - MIR SINE MIR -8 254 29 2267 66 7 10 chr17 19617863 19618164 -69886389 - AluY SINE Alu -9 302 3 2097 113 3 3 chr17 19618166 19618457 -69886096 - AluSq SINE Alu -22 291 1 208 300 40 20 chr17 19618650 19618750 -69885803 + MIR SINE MIR 88 188 -60 24 0 0 0 chr17 19620034 19620058 -69884495 + GC_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 19620244 19620272 -69884281 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr17 19620546 19620570 -69883983 + GC_rich Low_complexity Low_complexity 1 24 0 207 254 0 0 chr17 19622055 19622118 -69882435 + CT-rich Low_complexity Low_complexity 1 63 0 224 261 57 89 chr17 19622500 19622657 -69881896 + MIR3 SINE MIR 28 179 -29 290 322 107 8 chr17 19623449 19623570 -69880983 - L2 LINE L2 -1 3312 3180 288 243 21 111 chr17 19624033 19624268 -69880285 + MER102b DNA MER1_type 77 290 -51 408 261 235 41 chr17 19624440 19624708 -69879845 - L2 LINE L2 -48 3265 2946 201 191 21 21 chr17 19624697 19624744 -69879809 - MIR SINE MIR -95 113 67 * 1747 84 133 0 chr17 19624874 19625152 -69879401 + AluSp SINE Alu 1 311 0 257 224 17 0 chr17 19626801 19626859 -69877694 + CT-rich Low_complexity Low_complexity 6 64 0 219 69 0 0 chr17 19628156 19628185 -69876368 + (CAGCC)n Simple_repeat Simple_repeat 3 31 0 276 295 0 27 chr17 19629473 19629585 -69874968 + CT-rich Low_complexity Low_complexity 3 111 0 297 128 0 0 chr17 19630382 19630429 -69874124 + (TG)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr17 19630655 19630677 -69873876 + GC_rich Low_complexity Low_complexity 1 22 0 268 80 0 40 chr17 19630950 19631000 -69873553 + (TCCC)n Simple_repeat Simple_repeat 4 51 0 369 0 0 0 chr17 19631860 19631901 -69872652 + (CAG)n Simple_repeat Simple_repeat 1 41 0 218 356 48 0 chr17 19637261 19637365 -69867188 + MIR SINE MIR 80 188 -74 214 162 0 0 chr17 19638238 19638275 -69866278 + CT-rich Low_complexity Low_complexity 1 37 0 187 321 76 30 chr17 19638275 19638512 -69866041 + L2 LINE L2 1607 1854 -1460 226 323 43 0 chr17 19638927 19639006 -69865547 + MIR SINE MIR 31 104 -104 196 261 87 0 chr17 19639466 19639535 -69865018 + MIR SINE MIR 103 177 -85 321 261 254 0 chr17 19639908 19640038 -69864515 + MIR SINE MIR 76 238 -24 238 207 52 17 chr17 19640508 19640566 -69863987 + MIR SINE MIR 117 176 -86 2432 63 0 0 chr17 19640579 19640879 -69863674 + AluY SINE Alu 1 300 -11 2129 124 0 7 chr17 19640886 19641193 -69863360 + AluSx SINE Alu 1 305 -7 1678 139 45 14 chr17 19641457 19641770 -69862783 - AluJb SINE Alu 0 312 1 212 265 20 0 chr17 19642488 19642537 -69862016 - L2 LINE L2 0 3313 3264 183 377 0 0 chr17 19642577 19642638 -69861915 - MIR SINE MIR -113 149 89 869 206 7 0 chr17 19642747 19642902 -69861651 - AluJb SINE Alu -15 297 142 2208 93 0 0 chr17 19642917 19643245 -69861308 - AluSc SINE Alu 0 309 1 419 310 26 0 chr17 19643262 19643375 -69861178 + MIR SINE MIR 82 197 -65 258 268 0 0 chr17 19644260 19644316 -69860237 - L2 LINE L2 -213 3059 3004 775 271 147 0 chr17 19644719 19644992 -69859561 - MLT1H LTR MaLR -198 351 39 746 9 60 26 chr17 19646432 19646548 -69858005 + (TTTTA)n Simple_repeat Simple_repeat 5 124 0 1833 147 4 0 chr17 19646551 19646823 -69857730 - AluJb SINE Alu -31 281 9 286 274 74 21 chr17 19646837 19646932 -69857621 - MIR SINE MIR -56 206 107 265 344 45 40 chr17 19646968 19647192 -69857361 - L2 LINE L2 -3 3310 3086 250 85 21 21 chr17 19648819 19648866 -69855687 + (TA)n Simple_repeat Simple_repeat 2 48 0 618 163 62 47 chr17 19650722 19650851 -69853702 - FLAM_C SINE Alu -2 131 1 197 266 78 0 chr17 19651591 19651655 -69852898 - MIR3 SINE MIR -31 177 109 186 269 0 0 chr17 19654052 19654104 -69850449 + MIR SINE MIR 81 132 -76 264 264 81 26 chr17 19654188 19654346 -69850207 + MIR SINE MIR 19 182 -63 257 125 0 0 chr17 19654845 19654885 -69849668 + L3 LINE CR1 1426 1465 -112 291 276 58 0 chr17 19655452 19655539 -69849014 + MIR SINE MIR 58 149 -113 2006 115 11 4 chr17 19655614 19655925 -69848628 - AluSx SINE Alu 0 313 1 1945 151 0 0 chr17 19655930 19656252 -69848301 - AluSx SINE Alu 0 322 1 480 241 120 44 chr17 19656742 19656900 -69847653 - MIR SINE MIR -13 249 80 24 0 0 0 chr17 19657019 19657043 -69847510 + GC_rich Low_complexity Low_complexity 1 24 0 199 308 15 0 chr17 19658172 19658237 -69846316 - MIR SINE MIR -119 143 78 193 281 157 0 chr17 19658694 19658783 -69845770 + L2 LINE L2 3149 3251 -21 274 248 62 54 chr17 19659292 19659436 -69845117 + MIR3 SINE MIR 25 173 -35 917 146 0 7 chr17 19659723 19659874 -69844679 + L1MB8 LINE L1 6029 6178 0 248 349 89 12 chr17 19664898 19665113 -69839440 + MIR SINE MIR 9 242 -20 359 309 40 27 chr17 19666040 19666189 -69838364 + MIR3 SINE MIR 3 153 -55 219 103 0 0 chr17 19666866 19666905 -69837648 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2328 90 3 0 chr17 19668970 19669280 -69835273 + AluSp SINE Alu 1 311 -2 244 264 73 36 chr17 19670044 19670154 -69834399 + MIR SINE MIR 21 134 -74 237 200 108 0 chr17 19670240 19670305 -69834248 + MIR3 SINE MIR 114 185 -23 327 356 13 10 chr17 19670742 19670877 -69833676 + MIR3 SINE MIR 63 203 -5 1926 141 0 30 chr17 19670884 19671220 -69833333 - AluSx SINE Alu 0 327 1 2291 104 0 0 chr17 19673342 19673640 -69830913 - AluSc SINE Alu -11 298 1 619 168 0 20 chr17 19674702 19674803 -69829750 - FLAM_A SINE Alu -20 122 24 1953 98 59 18 chr17 19674803 19674970 -69829583 - AluSg1 SINE Alu -11 298 113 2266 107 0 0 chr17 19674970 19675268 -69829285 - AluSc SINE Alu -11 298 1 1953 98 59 18 chr17 19675268 19675386 -69829167 - AluSg1 SINE Alu -196 113 1 2138 107 7 0 chr17 19675462 19675762 -69828791 - AluSp SINE Alu -11 302 1 2039 128 0 0 chr17 19675986 19676275 -69828278 + AluSx SINE Alu 1 289 -23 230 349 36 46 chr17 19677515 19677710 -69826843 + MIR SINE MIR 10 202 -60 203 302 0 47 chr17 19678120 19678206 -69826347 + MIR SINE MIR 34 115 -93 194 362 124 37 chr17 19679594 19679812 -69824741 - L2 LINE L2 0 3313 3077 1612 163 75 14 chr17 19679951 19680233 -69824320 - AluJb SINE Alu -1 301 3 1918 152 0 10 chr17 19680245 19680555 -69823998 - AluJo SINE Alu -5 307 1 2453 57 0 0 chr17 19680599 19680896 -69823657 - AluY SINE Alu -14 297 1 2031 126 0 0 chr17 19680896 19681180 -69823373 - AluSx SINE Alu -9 303 19 404 259 211 24 chr17 19681595 19681761 -69822792 - MER117 DNA MER1_type 0 197 1 1946 90 26 8 chr17 19681773 19682041 -69822512 - AluSx SINE Alu -15 297 25 2246 96 10 0 chr17 19682125 19682428 -69822125 - AluSx SINE Alu -6 306 1 214 394 38 8 chr17 19684534 19684666 -69819887 + MIR3 SINE MIR 10 145 -63 563 319 18 33 chr17 19686216 19686489 -69818064 - L1ME LINE L1 -321 5800 5532 191 304 18 0 chr17 19687342 19687398 -69817155 + L2 LINE L2 3137 3193 -79 2269 69 0 3 chr17 19687475 19687765 -69816788 + AluY SINE Alu 1 289 -22 2034 147 0 3 chr17 19687774 19688081 -69816472 + AluSx SINE Alu 1 306 -6 231 295 47 47 chr17 19689446 19689575 -69814978 + L2 LINE L2 2911 3039 -233 314 338 21 48 chr17 19689575 19689720 -69814833 - L1MC4 LINE L1 -4 8038 7898 193 293 35 0 chr17 19690113 19690171 -69814382 + MIR3 SINE MIR 97 156 -52 2241 100 3 3 chr17 19690330 19690640 -69813913 - AluY SINE Alu -1 310 1 222 37 0 0 chr17 19690641 19690668 -69813885 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2210 106 0 0 chr17 19690673 19690957 -69813596 - AluSx SINE Alu -28 284 1 2233 113 3 0 chr17 19691361 19691671 -69812882 + AluSx SINE Alu 1 311 -1 450 256 142 62 chr17 19691877 19692166 -69812387 - L3b LINE CR1 -156 1427 1116 306 356 44 31 chr17 19692494 19692719 -69811834 + L3 LINE CR1 708 935 -642 509 230 79 7 chr17 19692834 19692973 -69811580 + L3 LINE CR1 1242 1390 -187 187 386 34 0 chr17 19693046 19693134 -69811419 - MIR SINE MIR -58 150 60 188 298 177 32 chr17 19693195 19693353 -69811200 + L3 LINE CR1 1382 1562 -15 274 228 114 63 chr17 19695643 19695801 -69808752 + L1ME4a LINE L1 5956 6121 0 293 273 118 35 chr17 19696376 19696562 -69807991 + MIR3 SINE MIR 2 205 -3 251 271 129 0 chr17 19697080 19697150 -69807403 + MIR SINE MIR 103 181 -81 212 286 62 124 chr17 19697246 19697519 -69807034 + L2 LINE L2 2999 3254 -18 202 320 148 16 chr17 19698040 19698162 -69806391 - MIR3 SINE MIR -56 152 15 243 329 40 0 chr17 19698968 19699044 -69805509 + L2 LINE L2 3193 3271 -1 185 311 14 27 chr17 19699383 19699457 -69805096 + MIR SINE MIR 93 165 -97 2233 95 0 0 chr17 19699801 19700096 -69804457 + AluY SINE Alu 1 295 -16 21 0 0 0 chr17 19701967 19701988 -69802565 + AT_rich Low_complexity Low_complexity 1 21 0 2504 59 0 3 chr17 19701991 19702298 -69802255 + AluY SINE Alu 1 306 -5 226 292 28 0 chr17 19703482 19703554 -69800999 + MLT1K LTR MaLR 512 585 -3 1686 149 4 15 chr17 19703856 19704125 -69800428 - AluJb SINE Alu -46 266 1 692 289 11 27 chr17 19706646 19706683 -69797870 + L1ME3A LINE L1 5610 5646 -524 455 143 13 0 chr17 19706683 19706760 -69797793 + MER116 DNA Mariner 3 80 0 692 289 11 27 chr17 19706760 19706985 -69797568 + L1ME3A LINE L1 5646 5868 -302 476 198 123 14 chr17 19707008 19707217 -69797336 + L1ME3A LINE L1 5925 6170 0 232 279 257 7 chr17 19708870 19709006 -69795547 + MIR3 SINE MIR 21 190 -18 211 322 56 7 chr17 19709464 19709607 -69794946 + (CTGGGG)n Simple_repeat Simple_repeat 5 154 0 379 356 49 49 chr17 19709841 19710189 -69794364 + L2 LINE L2 2917 3264 -49 219 339 73 0 chr17 19712139 19712248 -69792305 - MIR SINE MIR -143 119 3 245 289 133 0 chr17 19712302 19712392 -69792161 - L2 LINE L2 0 3272 3171 309 51 0 0 chr17 19712510 19712549 -69792004 + (CA)n Simple_repeat Simple_repeat 1 39 0 424 335 51 6 chr17 19713277 19713453 -69791100 - MIR SINE MIR -76 186 3 245 291 154 43 chr17 19713472 19713589 -69790964 - MIR SINE MIR -62 146 17 199 307 80 23 chr17 19713721 19713809 -69790744 + MIR SINE MIR 48 140 -122 243 319 17 42 chr17 19714009 19714128 -69790425 + MIR3 SINE MIR 40 155 -53 185 353 133 0 chr17 19714401 19714551 -69790002 + L2 LINE L2 2691 2860 -454 1230 197 78 7 chr17 19714599 19715047 -69789506 + MLT1F1 LTR MaLR 3 567 0 426 263 29 64 chr17 19715048 19715219 -69789334 + L2 LINE L2 2900 3064 -208 552 316 68 46 chr17 19716404 19716583 -69787970 + MIR SINE MIR 21 208 -54 2042 134 3 0 chr17 19716583 19716868 -69787685 + AluSx SINE Alu 1 289 -23 465 66 0 0 chr17 19716868 19716929 -69787624 + (CATA)n Simple_repeat Simple_repeat 4 64 0 552 316 68 46 chr17 19716935 19716992 -69787561 + MIR SINE MIR 208 262 0 254 308 62 72 chr17 19717370 19717565 -69786988 - MIR SINE MIR -4 258 66 346 298 106 14 chr17 19717679 19717820 -69786733 - MIR SINE MIR -20 242 89 500 318 46 15 chr17 19719659 19719854 -69784699 + MIR SINE MIR 57 257 -5 2339 90 0 0 chr17 19719856 19720157 -69784396 - AluSg SINE Alu -9 301 1 252 339 77 15 chr17 19720162 19720292 -69784261 - MIR3 SINE MIR -67 141 4 615 271 122 18 chr17 19720641 19721013 -69783540 + L1MC4a LINE L1 5624 6017 -104 2191 111 0 7 chr17 19721862 19722168 -69782385 + AluSq SINE Alu 1 304 -9 2139 123 0 7 chr17 19722183 19722485 -69782068 + AluSx SINE Alu 13 312 0 205 333 163 41 chr17 19723712 19723835 -69780718 - MER5B DNA MER1_type 0 178 41 1630 109 26 0 chr17 19723835 19724064 -69780489 + AluSg SINE Alu 1 235 -75 2251 84 3 29 chr17 19725329 19725640 -69778913 - AluSx SINE Alu -4 308 6 241 321 89 18 chr17 19725892 19726004 -69778549 + L3 LINE CR1 1362 1481 -96 255 196 18 0 chr17 19726041 19726097 -69778456 - MER96 DNA MER1_type? 0 175 119 188 222 0 0 chr17 19726699 19726735 -69777818 - L2 LINE L2 -16 3297 3262 356 225 196 0 chr17 19726737 19726910 -69777643 - L2 LINE L2 -240 3073 2867 267 283 75 19 chr17 19727403 19727509 -69777044 - MIR SINE MIR -131 131 20 209 304 160 28 chr17 19727856 19728037 -69776516 + L2 LINE L2 2830 3034 -238 1624 200 7 0 chr17 19728363 19728653 -69775900 + AluJo SINE Alu 1 292 -20 2162 106 0 0 chr17 19728654 19728936 -69775617 + AluSc SINE Alu 13 294 -15 261 0 0 0 chr17 19728936 19728965 -69775588 + (TA)n Simple_repeat Simple_repeat 1 29 0 300 288 0 0 chr17 19728967 19729033 -69775520 - L1MC4 LINE L1 -1339 6703 6638 1860 131 37 20 chr17 19729371 19729668 -69774885 - AluJo SINE Alu -9 303 2 218 241 17 52 chr17 19729860 19729918 -69774635 - MIR SINE MIR -8 254 199 728 184 7 29 chr17 19729922 19730058 -69774495 - FLAM_C SINE Alu -10 133 1 368 280 166 6 chr17 19730074 19730231 -69774322 - MIR SINE MIR 0 262 81 681 251 142 5 chr17 19731835 19732046 -69772507 + MIR SINE MIR 13 252 -10 350 390 16 37 chr17 19732270 19732369 -69772184 + L1MB7 LINE L1 5592 5687 -434 2490 64 0 3 chr17 19732369 19732681 -69771872 + AluY SINE Alu 1 311 0 350 390 16 37 chr17 19732681 19732768 -69771785 + L1MB7 LINE L1 5687 5774 -347 2423 62 10 3 chr17 19732872 19733181 -69771372 + AluY SINE Alu 1 311 0 228 135 0 0 chr17 19733181 19733218 -69771335 + (TA)n Simple_repeat Simple_repeat 2 38 0 472 286 84 5 chr17 19733219 19733422 -69771131 + L1MB7 LINE L1 5966 6184 0 1786 124 50 7 chr17 19733431 19733713 -69770840 + AluSx SINE Alu 1 294 -18 189 0 0 0 chr17 19733758 19733779 -69770774 + (GA)n Simple_repeat Simple_repeat 2 22 0 278 256 50 16 chr17 19733799 19733834 -69770719 + L1ME4a LINE L1 5997 6029 -92 1665 168 18 3 chr17 19733834 19734120 -69770433 - AluJo SINE Alu -22 290 1 278 256 50 16 chr17 19734120 19734205 -69770348 + L1ME4a LINE L1 6029 6121 0 2003 69 0 0 chr17 19734463 19734710 -69769843 + AluY SINE Alu 1 247 -64 207 0 0 0 chr17 19734712 19734735 -69769818 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 239 333 91 15 chr17 19734804 19734936 -69769617 - MIR3 SINE MIR -64 144 3 195 289 201 29 chr17 19735540 19735779 -69768774 + L2 LINE L2 2809 3088 -225 227 279 29 15 chr17 19837132 19837200 -69667353 + MIR SINE MIR 40 108 -154 2194 122 0 0 chr17 19837222 19837525 -69667028 - AluSx SINE Alu -9 303 1 855 264 199 13 chr17 19837526 19837913 -69666640 - L2 LINE L2 0 3272 2814 1789 109 28 0 chr17 19838654 19838902 -69665651 - AluSq SINE Alu -46 267 13 321 258 129 16 chr17 19839627 19839751 -69664802 - L2 LINE L2 0 3313 3176 1589 200 51 3 chr17 19839877 19840244 -69664309 + MLT1B LTR MaLR 1 424 -4 799 269 66 4 chr17 19840591 19840818 -69663735 + MIR SINE MIR 2 242 -20 186 71 0 0 chr17 19840923 19840951 -69663602 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2210 82 7 0 chr17 19840951 19841231 -69663322 - AluSx SINE Alu -28 284 3 328 301 0 0 chr17 19841461 19841544 -69663009 - MIR SINE MIR -71 191 109 2239 105 0 6 chr17 19842654 19842968 -69661585 + AluSx SINE Alu 1 312 0 2179 52 38 10 chr17 19843062 19843352 -69661201 - AluY SINE Alu -13 298 1 409 157 92 105 chr17 19843352 19843386 -69661167 - MER5B DNA MER1_type -27 151 118 1503 175 32 23 chr17 19843386 19843695 -69660858 + AluJb SINE Alu 1 312 0 409 157 92 105 chr17 19843695 19843749 -69660804 - MER5B DNA MER1_type -60 118 65 2181 96 10 3 chr17 19843749 19844050 -69660503 - AluSg SINE Alu -7 303 1 409 157 92 105 chr17 19844050 19844113 -69660440 - MER5B DNA MER1_type -113 65 1 2099 88 0 0 chr17 19844325 19844598 -69659955 + AluSg SINE Alu 1 273 -37 468 91 0 0 chr17 19844614 19844680 -69659873 + (CA)n Simple_repeat Simple_repeat 2 67 0 214 256 37 49 chr17 19844794 19844876 -69659677 + MIR SINE MIR 117 197 -65 213 303 0 45 chr17 19844923 19844989 -69659564 - MIR SINE MIR -1 261 199 1137 180 167 0 chr17 19844995 19845422 -69659131 + MER39 LTR ERV1 3 495 -158 2129 114 7 3 chr17 19845425 19845724 -69658829 + AluSx SINE Alu 1 300 -12 2176 112 3 6 chr17 19845726 19846039 -69658514 + AluSp SINE Alu 1 312 -1 554 224 0 9 chr17 19846099 19846215 -69658338 - FLAM_A SINE Alu -3 139 25 2257 96 0 16 chr17 19846232 19846544 -69658009 - AluSx SINE Alu 0 312 6 799 134 27 13 chr17 19846554 19846703 -69657850 + MER39 LTR ERV1 557 707 0 1788 100 8 15 chr17 19846704 19846965 -69657588 - AluSx SINE Alu -20 292 34 646 268 49 0 chr17 19846986 19847150 -69657403 - MIR SINE MIR -80 182 11 227 286 32 0 chr17 19847169 19847232 -69657321 + MLT1K LTR MaLR 514 578 -10 1083 139 0 6 chr17 19847371 19847844 -69656709 + (GGA)n Simple_repeat Simple_repeat 1 470 0 611 239 91 5 chr17 19848641 19848838 -69655715 + LTR33 LTR ERVL 1 214 -307 975 204 160 85 chr17 19848853 19849034 -69655519 + MLT1F1 LTR MaLR 8 174 -393 1724 160 0 26 chr17 19849034 19849340 -69655213 + AluJo SINE Alu 14 311 -1 975 204 160 85 chr17 19849340 19849360 -69655193 + MLT1F1 LTR MaLR 174 191 -376 2157 119 6 6 chr17 19849360 19849672 -69654881 + AluSx SINE Alu 1 312 0 975 204 160 85 chr17 19849672 19849806 -69654747 + MLT1F1 LTR MaLR 191 314 -253 2198 80 3 20 chr17 19849806 19850107 -69654446 - AluSp SINE Alu -16 297 2 975 204 160 85 chr17 19850107 19850291 -69654262 + MLT1F1 LTR MaLR 314 559 -8 487 305 85 36 chr17 19850501 19850920 -69653633 - L2 LINE L2 -76 3237 2797 1739 184 92 9 chr17 19851310 19851647 -69652906 + MLT1A1 LTR MaLR 1 365 0 232 382 32 0 chr17 19851955 19852078 -69652475 + MIR SINE MIR 29 155 -107 517 256 155 14 chr17 19853014 19853047 -69651506 - Charlie8 DNA MER1_type -65 276 249 583 248 38 105 chr17 19853047 19853257 -69651296 - MER91A DNA MER1_type 0 196 1 517 256 155 14 chr17 19853257 19853430 -69651123 - Charlie8 DNA MER1_type -92 249 41 230 192 77 77 chr17 19854405 19854483 -69650070 + LTR48B LTR ERV1 5 82 -562 313 340 82 0 chr17 19855738 19855885 -69648668 + MIR SINE MIR 80 238 -24 329 259 78 0 chr17 19856612 19856728 -69647825 + MIR3 SINE MIR 33 157 -51 807 204 45 23 chr17 19858261 19858481 -69646072 + Charlie1 DNA MER1_type 2347 2571 -190 1045 131 0 0 chr17 19858492 19858645 -69645908 - FRAM SINE Alu -13 163 11 3905 160 22 25 chr17 19859389 19860077 -69644476 + L1MB2 LINE L1 5483 6168 -3 805 191 0 0 chr17 19860080 19860221 -69644332 + FRAM SINE Alu 1 141 -35 446 252 0 19 chr17 19862145 19862252 -69642301 - MLT1C LTR MaLR -51 416 312 877 256 150 34 chr17 19862333 19862747 -69641806 + MLT1C LTR MaLR 6 467 0 1487 164 44 49 chr17 19863066 19863431 -69641122 + L1MB3 LINE L1 5820 6182 -1 307 326 23 30 chr17 19863433 19863565 -69640988 + L3 LINE CR1 1428 1558 -19 198 0 0 0 chr17 19864467 19864489 -69640064 + (TG)n Simple_repeat Simple_repeat 1 22 0 280 250 71 0 chr17 19865532 19865616 -69638937 + MIR3 SINE MIR 74 163 -45 232 258 161 8 chr17 19865657 19865781 -69638772 + MER103 DNA DNA 12 154 -12 2540 62 3 10 chr17 19866050 19866357 -69638196 + AluY SINE Alu 1 305 -6 1998 108 32 157 chr17 19866606 19866905 -69637648 - MLT2D LTR ERVL -1 413 78 1378 127 9 146 chr17 19866905 19867102 -69637451 - AluJo SINE Alu -16 286 150 2170 117 0 46 chr17 19867102 19867248 -69637305 + AluSx SINE Alu 1 128 -184 2238 91 3 11 chr17 19867248 19867557 -69636996 + AluY SINE Alu 1 307 0 2170 117 0 46 chr17 19867557 19867716 -69636837 + AluSx SINE Alu 128 293 -19 1378 127 9 146 chr17 19867716 19867848 -69636705 - AluJo SINE Alu -152 150 2 1998 108 32 157 chr17 19867848 19867906 -69636647 - MLT2D LTR ERVL -336 78 126 1949 138 0 51 chr17 19867906 19868070 -69636483 - AluSx SINE Alu -16 296 154 2720 49 0 0 chr17 19868070 19868375 -69636178 - AluY SINE Alu -6 305 1 1949 138 0 51 chr17 19868375 19868522 -69636031 - AluSx SINE Alu -158 154 1 1998 108 32 157 chr17 19868522 19868635 -69635918 - MLT2D LTR ERVL -287 127 1 2263 132 7 0 chr17 19869513 19869823 -69634730 - AluSx SINE Alu 0 312 1 196 345 95 0 chr17 19870164 19870280 -69634273 + L3b LINE CR1 1102 1228 -355 411 231 294 0 chr17 19870763 19870906 -69633647 + MER91A DNA MER1_type 1 185 -11 2574 126 25 0 chr17 19871210 19871686 -69632867 + MER1A DNA MER1_type 1 529 0 2449 88 3 0 chr17 19871687 19871993 -69632560 + AluSq SINE Alu 3 309 -4 391 265 94 39 chr17 19874913 19875094 -69629459 - MIR3 SINE MIR -14 194 4 220 271 129 0 chr17 19875181 19875251 -69629302 + L2 LINE L2 3233 3311 -2 2357 89 0 0 chr17 19875393 19875712 -69628841 + AluSc SINE Alu 1 319 0 21 36 0 0 chr17 19876290 19876318 -69628235 + AT_rich Low_complexity Low_complexity 1 28 0 1927 156 22 33 chr17 19876573 19876933 -69627620 + MLT1A1 LTR MaLR 10 365 0 525 58 0 0 chr17 19876969 19877038 -69627515 + (TG)n Simple_repeat Simple_repeat 1 69 0 1641 162 29 11 chr17 19878799 19879071 -69625482 - AluJb SINE Alu -35 277 1 37 62 0 0 chr17 19883013 19883078 -69621475 + GC_rich Low_complexity Low_complexity 1 65 0 22 0 0 0 chr17 19883187 19883209 -69621344 + GC_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr17 19883260 19883285 -69621268 + GC_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr17 19883448 19883484 -69621069 + GC_rich Low_complexity Low_complexity 1 36 0 29 47 0 0 chr17 19883518 19883561 -69620992 + GC_rich Low_complexity Low_complexity 1 43 0 195 114 0 0 chr17 19883561 19883596 -69620957 + (CCCCG)n Simple_repeat Simple_repeat 5 39 0 418 305 23 11 chr17 19883933 19884107 -69620446 + MER5A DNA MER1_type 7 182 -7 2940 114 10 22 chr17 19884761 19885011 -69619542 - MER31A LTR ERV1 0 485 242 3971 131 71 6 chr17 19885011 19885685 -69618868 + LTR62 LTR ERVK 1 718 -1 2940 114 10 22 chr17 19885685 19885925 -69618628 - MER31A LTR ERV1 -243 242 1 336 143 0 0 chr17 19886677 19886733 -69617820 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 1943 152 7 14 chr17 19886758 19887054 -69617499 - AluJb SINE Alu -18 294 1 471 258 37 88 chr17 19887065 19887360 -69617193 + L2 LINE L2 1812 2091 -1223 741 154 77 7 chr17 19887446 19887589 -69616964 - FRAM SINE Alu -24 152 1 2120 199 56 5 chr17 19887638 19888069 -69616484 - LTR40c LTR ERVL -12 453 1 685 304 15 0 chr17 19888249 19888450 -69616103 - MIR SINE MIR -12 250 47 1803 185 0 3 chr17 19888476 19888768 -69615785 - AluJb SINE Alu -21 291 1 2274 99 0 7 chr17 19888778 19889072 -69615481 - AluSc SINE Alu -17 292 1 301 306 103 32 chr17 19889100 19889501 -69615052 + L2 LINE L2 2566 3050 -222 305 359 95 26 chr17 19889583 19889887 -69614666 + L2 LINE L2 2943 3267 -5 224 275 25 50 chr17 19889975 19890055 -69614498 - L2 LINE L2 -1371 1943 1866 22 35 0 0 chr17 19890428 19890457 -69614096 + AT_rich Low_complexity Low_complexity 1 29 0 2066 104 11 0 chr17 19890536 19890814 -69613739 + AluSq SINE Alu 1 281 -32 2220 118 0 16 chr17 19890842 19891156 -69613397 + AluSc SINE Alu 1 309 0 296 309 43 29 chr17 19891170 19891309 -69613244 - MIR SINE MIR -73 189 49 2028 146 0 14 chr17 19891364 19891659 -69612894 + AluJo SINE Alu 1 291 -21 2331 69 0 69 chr17 19891848 19892182 -69612371 + AluY SINE Alu 1 311 0 708 163 114 24 chr17 19892624 19892790 -69611763 - MER5A DNA MER1_type -2 187 7 354 143 0 0 chr17 19892940 19893017 -69611536 + (CA)n Simple_repeat Simple_repeat 2 78 0 2796 82 40 72 chr17 19893041 19893503 -69611050 + MER31A LTR ERV1 1 476 -9 1974 152 76 17 chr17 19893503 19893911 -69610642 - MSTB1 LTR MaLR 0 432 1 2796 82 40 72 chr17 19893911 19893930 -69610623 + MER31A LTR ERV1 476 469 -16 2541 47 7 13 chr17 19893930 19894230 -69610323 - AluY SINE Alu -13 298 1 2796 82 40 72 chr17 19894230 19894248 -69610305 + MER31A LTR ERV1 468 485 0 2089 137 0 3 chr17 19894345 19894671 -69609882 - AluSx SINE Alu 0 312 1 207 302 0 0 chr17 19894727 19894790 -69609763 + L3 LINE CR1 798 860 -717 335 323 55 24 chr17 19895333 19895497 -69609056 - L1MC5 LINE L1 -26 7935 7767 351 277 163 60 chr17 19895542 19895772 -69608781 - L1ME3A LINE L1 -223 5947 5742 2341 92 0 3 chr17 19895772 19896064 -69608489 - AluSc SINE Alu -18 291 1 351 277 163 60 chr17 19896064 19896313 -69608240 - L1ME3A LINE L1 -428 5742 5419 1867 155 3 40 chr17 19896324 19896678 -69607875 + MLT1A2-int LTR MaLR 1395 1735 0 1142 203 86 45 chr17 19896678 19897037 -69607516 + MLT1A2 LTR MaLR 1 374 0 291 265 20 10 chr17 19897038 19897140 -69607413 - L1ME3A LINE L1 -763 5407 5305 2113 203 56 8 chr17 19897141 19897620 -69606933 - MLT1D LTR MaLR -2 503 2 3056 132 6 0 chr17 19897668 19898159 -69606394 + L1MB2 LINE L1 5481 5974 -209 825 183 0 0 chr17 19898159 19898285 -69606268 + FLAM_C SINE Alu 1 126 -17 358 213 46 28 chr17 19898296 19898404 -69606149 + L1MB2 LINE L1 5954 6063 -108 708 171 0 68 chr17 19898404 19898486 -69606067 + L1MB3 LINE L1 6020 6085 -98 2310 83 35 0 chr17 19898486 19898774 -69605779 + AluSx SINE Alu 1 298 -14 708 171 0 68 chr17 19898774 19898867 -69605686 + L1MB3 LINE L1 6085 6183 0 1717 192 34 0 chr17 19898943 19899240 -69605313 - AluJo SINE Alu -5 307 1 271 311 27 122 chr17 19899240 19899568 -69604985 - L2 LINE L2 -10 3262 2966 1957 158 7 3 chr17 19900004 19900307 -69604246 - AluJo SINE Alu -8 304 1 1846 155 0 51 chr17 19900999 19901166 -69603387 - AluJo SINE Alu -12 300 155 2375 92 3 0 chr17 19901166 19901459 -69603094 - AluSx SINE Alu -17 295 2 1846 155 0 51 chr17 19901459 19901607 -69602946 - AluJo SINE Alu -157 155 1 1015 196 19 19 chr17 19901934 19902143 -69602410 + MER20 DNA MER1_type 11 219 0 732 255 166 18 chr17 19902266 19902603 -69601950 + MLT1J2 LTR MaLR 62 448 -2 1512 221 104 27 chr17 19902872 19903314 -69601239 + MLT2B1 LTR ERVL 4 487 -33 402 21 0 0 chr17 19903314 19903361 -69601192 + (CA)n Simple_repeat Simple_repeat 2 48 0 1512 221 104 27 chr17 19903361 19903398 -69601155 + MLT2B1 LTR ERVL 487 520 0 360 274 117 89 chr17 19903398 19903646 -69600907 - MLT1K LTR MaLR -22 566 312 2272 118 0 7 chr17 19904143 19904447 -69600106 - AluSx SINE Alu -10 302 1 2520 81 3 0 chr17 19904455 19904763 -69599790 - AluSp SINE Alu -4 309 1 391 289 38 25 chr17 19904764 19904923 -69599630 + L2 LINE L2 3113 3273 -40 216 0 0 0 chr17 19905882 19905906 -69598647 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2265 97 0 0 chr17 19905910 19906189 -69598364 - AluSg SINE Alu -31 279 1 2310 114 7 0 chr17 19906335 19906642 -69597911 - AluSq SINE Alu -4 309 1 2110 130 28 33 chr17 19906857 19907248 -69597305 - MLT1B LTR MaLR 0 390 2 1143 232 114 4 chr17 19907250 19907530 -69597023 - MLT1B-int LTR MaLR -1 1370 1060 466 198 52 35 chr17 19907808 19907924 -69596629 + L2 LINE L2 3196 3313 0 660 174 102 12 chr17 19908591 19908758 -69595795 + MER5A DNA MER1_type 4 185 -4 186 300 0 0 chr17 19908762 19908812 -69595741 - MIR SINE MIR -166 96 47 858 299 170 22 chr17 19908964 19909233 -69595320 + L2 LINE L2 2848 3076 -237 1462 117 180 0 chr17 19909233 19909366 -69595187 - AluSx SINE Alu 0 302 194 180 0 0 0 chr17 19909366 19909386 -69595167 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1462 117 180 0 chr17 19909386 19909508 -69595045 - AluSx SINE Alu -108 194 1 858 299 170 22 chr17 19909508 19909643 -69594910 + L2 LINE L2 3076 3312 -1 2375 88 3 0 chr17 19909890 19910185 -69594368 - AluSx SINE Alu -16 296 1 3680 194 41 41 chr17 19910191 19910758 -69593795 - L1MB2 LINE L1 0 6171 5605 1654 179 54 0 chr17 19910758 19911038 -69593515 - AluJo SINE Alu -17 295 1 3680 194 41 41 chr17 19911038 19911305 -69593248 - L1MB2 LINE L1 -566 5605 5334 2135 120 0 7 chr17 19911305 19911613 -69592940 - AluY SINE Alu -5 306 1 3680 194 41 41 chr17 19911613 19911654 -69592899 - L1MB2 LINE L1 -836 5335 5295 694 291 35 0 chr17 19911692 19911919 -69592634 - MIR SINE MIR -12 250 16 186 291 51 43 chr17 19912014 19912131 -69592422 + MIR3 SINE MIR 8 125 -83 1587 189 46 4 chr17 19913165 19913446 -69591107 + AluJo SINE Alu 1 293 -19 479 253 70 22 chr17 19913770 19913992 -69590561 - MER67D LTR ERV1 -6 537 273 * 1274 215 37 100 chr17 19913961 19914363 -69590190 - MER67B LTR ERV1 -252 409 147 1656 165 0 46 chr17 19914363 19914666 -69589887 - AluJo SINE Alu -23 289 1 1274 215 37 100 chr17 19914666 19914805 -69589748 - MER67B LTR ERV1 -514 147 1 1992 159 18 0 chr17 19914829 19915162 -69589391 - L1MB3 LINE L1 -7 6176 5838 1821 115 0 0 chr17 19915199 19915434 -69589119 + AluSq SINE Alu 14 248 -65 752 176 8 8 chr17 19915787 19915918 -69588635 + FLAM_C SINE Alu 3 133 0 2241 108 10 3 chr17 19916009 19916316 -69588237 + AluSx SINE Alu 1 309 -3 4450 162 18 36 chr17 19916326 19916675 -69587878 + L1MB5 LINE L1 5333 5687 -487 1502 196 0 58 chr17 19916675 19916766 -69587787 - AluJo SINE Alu -18 294 199 2209 88 3 3 chr17 19916766 19917050 -69587503 - AluSp SINE Alu -10 303 20 1502 196 0 58 chr17 19917050 19917270 -69587283 - AluJo SINE Alu -113 199 1 4450 162 18 36 chr17 19917270 19917758 -69586795 + L1MB5 LINE L1 5687 6155 -19 333 0 0 0 chr17 19917762 19917799 -69586754 + (CA)n Simple_repeat Simple_repeat 2 38 0 2266 101 0 3 chr17 19918268 19918566 -69585987 - AluSx SINE Alu -15 297 1 1894 179 33 74 chr17 19918622 19919109 -69585444 - MLT1C LTR MaLR 0 467 1 252 247 67 0 chr17 19919226 19919315 -69585238 + L1MA9 LINE L1 5987 6081 -231 513 195 81 16 chr17 19919318 19919441 -69585112 + L1MA9 LINE L1 6181 6311 -1 2858 151 14 12 chr17 19920201 19920685 -69583868 + MER31A LTR ERV1 1 485 0 816 112 0 0 chr17 19921134 19921241 -69583312 + AluSq/x SINE Alu 1 107 -206 2338 72 0 33 chr17 19921943 19922247 -69582306 - AluY SINE Alu -17 294 1 279 0 0 0 chr17 19922689 19922720 -69581833 + (CA)n Simple_repeat Simple_repeat 1 31 0 1014 215 0 6 chr17 19922882 19923059 -69581494 - MER41D LTR ERV1 0 557 382 2188 99 14 3 chr17 19923090 19923384 -69581169 + AluSx SINE Alu 1 297 -15 2120 90 45 3 chr17 19923533 19923821 -69580732 + AluSg SINE Alu 1 300 -10 236 75 0 25 chr17 19923869 19923909 -69580644 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1045 8 25 0 chr17 19923909 19924027 -69580526 - MER107 DNA MER1_type -52 145 25 1881 139 11 0 chr17 19924027 19924301 -69580252 + AluSg SINE Alu 1 277 -33 1611 149 4 37 chr17 19924307 19924576 -69579977 - AluJo SINE Alu -52 260 1 1024 248 99 40 chr17 19924584 19925126 -69579427 - L1MEc LINE L1 -3528 2687 2156 * 1245 253 93 63 chr17 19925125 19925577 -69578976 + L1MC5 LINE L1 5729 6166 -1642 1635 222 126 28 chr17 19925577 19926037 -69578516 - MLT1D LTR MaLR 0 505 1 1245 253 93 63 chr17 19926037 19926850 -69577703 + L1MC5 LINE L1 6166 6927 -881 2228 89 0 10 chr17 19927530 19927863 -69576690 + AluSc SINE Alu 1 309 0 1677 85 0 0 chr17 19927866 19928078 -69576475 + AluSg/x SINE Alu 89 300 -10 929 149 238 14 chr17 19928631 19928845 -69575708 - MER58B DNA MER1_type -1 340 79 561 138 23 0 chr17 19929187 19929274 -69575279 - FAM SINE Alu -27 158 70 257 239 28 42 chr17 19929739 19929810 -69574743 + L2 LINE L2 3196 3265 -7 194 118 88 0 chr17 19929786 19929820 -69574733 - L2 LINE L2 -7 3306 3270 * 2217 84 3 16 chr17 19929848 19930156 -69574397 - AluSc SINE Alu -5 304 1 1201 140 9 50 chr17 19930204 19930426 -69574127 - MER2 DNA MER2_type -131 214 2 236 304 87 17 chr17 19930432 19930547 -69574006 - L3 LINE CR1 -476 1101 979 1214 122 0 58 chr17 19930884 19931089 -69573464 + LTR9B LTR ERV1 452 644 0 353 206 41 52 chr17 19931089 19931186 -69573367 + HUERS-P3b LTR ERV1 1 96 -7322 440 135 360 0 chr17 19931189 19931300 -69573253 + HUERS-P3b LTR ERV1 409 559 -6859 6923 118 15 7 chr17 19931312 19933073 -69571480 + HUERS-P3b LTR ERV1 747 2658 -4760 2067 209 31 3 chr17 19933073 19933461 -69571092 - LTR8 LTR ERV1 -292 399 1 1890 122 0 0 chr17 19933474 19933728 -69570825 + AluSg SINE Alu 53 306 -4 6113 79 10 9 chr17 19933728 19934526 -69570027 + HUERS-P3b LTR ERV1 3076 3874 -3544 * 16085 98 28 23 chr17 19934517 19934639 -69569914 + HUERS-P3b LTR ERV1 4713 4833 -2585 2395 86 3 0 chr17 19934639 19934941 -69569612 + AluSp SINE Alu 1 303 -10 16085 98 28 23 chr17 19934941 19937429 -69567124 + HUERS-P3b LTR ERV1 4833 7411 -7 3344 109 57 24 chr17 19937430 19937970 -69566583 + LTR9B LTR ERV1 1 558 -86 195 357 71 0 chr17 19938149 19938247 -69566306 + MIR SINE MIR 33 137 -125 1526 236 157 108 chr17 19938970 19939861 -69564692 + L1MC4 LINE L1 6737 7707 -335 2329 74 0 10 chr17 19939861 19940158 -69564395 + AluY SINE Alu 3 296 -15 1526 236 157 108 chr17 19940158 19940512 -69564041 + L1MC4 LINE L1 7707 8042 0 206 259 164 43 chr17 19941313 19941429 -69563124 - L2 LINE L2 0 3313 3184 1234 199 34 21 chr17 19942677 19942913 -69561640 - MER8 DNA MER2_type 0 239 1 23 0 0 0 chr17 19944773 19944796 -69559757 + AT_rich Low_complexity Low_complexity 1 23 0 600 251 89 34 chr17 19945238 19945417 -69559136 + MER5A DNA MER1_type 1 189 0 1730 137 107 0 chr17 19945546 19945817 -69558736 - AluSx SINE Alu -12 300 1 1971 153 0 3 chr17 19945980 19946281 -69558272 + AluSx SINE Alu 1 300 -12 423 158 12 37 chr17 19946287 19946369 -69558184 - MER116 DNA Mariner 0 80 1 830 226 139 62 chr17 19946411 19946734 -69557819 - MER7A DNA MER2_type 0 346 1 360 0 0 0 chr17 19946945 19946985 -69557568 + (CA)n Simple_repeat Simple_repeat 2 41 0 270 73 0 0 chr17 19947495 19947536 -69557017 + (CA)n Simple_repeat Simple_repeat 2 42 0 23 97 0 0 chr17 19947868 19947940 -69556613 + AT_rich Low_complexity Low_complexity 1 72 0 2429 75 7 0 chr17 19948195 19948489 -69556064 - AluSp SINE Alu -17 296 1 249 309 49 25 chr17 19948646 19948727 -69555826 - L2 LINE L2 -188 3084 3002 493 280 100 87 chr17 19948917 19949388 -69555165 + L1MEd LINE L1 112 588 -5531 1608 168 27 27 chr17 19949646 19949943 -69554610 - AluJb SINE Alu -15 297 1 1761 166 14 0 chr17 19950044 19950322 -69554231 + AluJo SINE Alu 3 284 -28 260 0 57 0 chr17 19950329 19950364 -69554189 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 619 220 245 17 chr17 19950372 19950613 -69553940 + L1MC4a LINE L1 5879 6174 -1634 2620 243 141 74 chr17 19950659 19950916 -69553637 + L1MC4 LINE L1 6345 6583 -1459 324 0 0 0 chr17 19950916 19950952 -69553601 + (CA)n Simple_repeat Simple_repeat 2 37 0 2620 243 141 74 chr17 19950952 19951304 -69553249 + L1MC4 LINE L1 6583 6910 -1132 2157 121 0 30 chr17 19951304 19951609 -69552944 - AluSx SINE Alu -16 296 1 2620 243 141 74 chr17 19951609 19951658 -69552895 + L1MC4 LINE L1 6910 6954 -1088 207 0 0 0 chr17 19951658 19951681 -69552872 + (TA)n Simple_repeat Simple_repeat 1 23 0 2620 243 141 74 chr17 19951681 19951702 -69552851 + L1MC4 LINE L1 6954 6972 -1070 2338 92 0 0 chr17 19951702 19951995 -69552558 - AluSg SINE Alu -17 293 1 2620 243 141 74 chr17 19951995 19952069 -69552484 + L1MC4 LINE L1 6972 7040 -1002 2368 97 0 0 chr17 19952069 19952369 -69552184 + AluYa5 SINE Alu 1 300 -11 2620 243 141 74 chr17 19952369 19952381 -69552172 + L1MC4 LINE L1 7040 7050 -992 2239 105 7 0 chr17 19952381 19952685 -69551868 + AluSq SINE Alu 1 306 -7 2620 243 141 74 chr17 19952685 19953504 -69551049 + L1MC4 LINE L1 7050 8040 -2 538 234 113 11 chr17 19953539 19953721 -69550832 + L1MC4a LINE L1 5741 5947 -223 28 102 0 0 chr17 19953966 19954064 -69550489 + AT_rich Low_complexity Low_complexity 1 98 0 228 337 35 23 chr17 19955262 19955348 -69549205 - L3 LINE CR1 -7 1570 1484 230 217 0 0 chr17 19955456 19955502 -69549051 - Alu SINE Alu -175 127 82 1659 191 3 7 chr17 19955566 19955849 -69548704 - AluJo SINE Alu -30 282 1 453 108 0 0 chr17 19956119 19956184 -69548369 - AluSx SINE Alu -6 305 241 1369 109 0 6 chr17 19956184 19956367 -69548186 - AluSx SINE Alu -130 182 1 889 129 8 8 chr17 19956420 19956544 -69548009 + FLAM_C SINE Alu 1 124 -9 228 143 0 0 chr17 19956766 19956808 -69547745 + (TA)n Simple_repeat Simple_repeat 1 42 0 2094 122 0 0 chr17 19957052 19957340 -69547213 + AluSx SINE Alu 1 288 -24 444 266 146 26 chr17 19957413 19957646 -69546907 - MIR SINE MIR 0 262 2 938 81 0 0 chr17 19961003 19961126 -69543427 - AluSg/x SINE Alu -2 308 186 1595 261 102 6 chr17 19961252 19961723 -69542830 - MLT1G LTR MaLR 0 590 75 2324 84 0 32 chr17 19961808 19962119 -69542434 + AluSx SINE Alu 1 301 -11 1330 233 51 36 chr17 19962128 19962519 -69542034 + MLT2C1 LTR ERVL 1 397 0 352 280 70 19 chr17 19962557 19962714 -69541839 + L1M4 LINE L1 2382 2546 -3600 940 342 23 12 chr17 19962739 19963166 -69541387 + LTR16A LTR ERVL 19 450 0 688 286 19 66 chr17 19963166 19963211 -69541342 + HERV16 LTR ERVL 1 47 -4949 2067 109 0 7 chr17 19963211 19963496 -69541057 - AluSx SINE Alu -17 295 13 688 286 19 66 chr17 19963496 19963768 -69540785 + HERV16 LTR ERVL 47 303 -4693 1890 304 67 47 chr17 19963859 19964384 -69540169 + HERV16 LTR ERVL 469 982 -4014 2383 99 0 3 chr17 19964384 19964698 -69539855 + AluSq SINE Alu 1 313 0 1890 304 67 47 chr17 19964698 19965258 -69539295 + HERV16 LTR ERVL 982 1576 -3420 1805 265 76 38 chr17 19965339 19965538 -69539015 + HERV16 LTR ERVL 1751 1941 -3055 2463 72 0 3 chr17 19965538 19965842 -69538711 + AluY SINE Alu 1 303 -8 1805 265 76 38 chr17 19965842 19966298 -69538255 + HERV16 LTR ERVL 1941 2431 -2565 2617 312 80 34 chr17 19966402 19966576 -69537977 + HERV16 LTR ERVL 2755 2920 -2734 2200 108 3 7 chr17 19966576 19966872 -69537681 - AluSg SINE Alu -15 295 1 2617 312 80 34 chr17 19966872 19967389 -69537164 + HERV16 LTR ERVL 2920 3412 -2242 2487 152 55 123 chr17 19967389 19967647 -69536906 - MER74A LTR ERVL 0 558 284 2320 95 0 3 chr17 19967647 19967943 -69536610 - AluSg SINE Alu -15 295 1 2487 152 55 123 chr17 19967943 19968283 -69536270 - MER74A LTR ERVL -274 284 1 2617 312 80 34 chr17 19968283 19968736 -69535817 + HERV16 LTR ERVL 3412 3843 -1811 1986 157 105 14 chr17 19968736 19969099 -69535454 - MSTD LTR MaLR 0 396 1 2617 312 80 34 chr17 19969099 19969528 -69535025 + HERV16 LTR ERVL 3843 4402 -1252 6288 141 8 15 chr17 19969745 19970270 -69534283 - L1MA7 LINE L1 0 6291 5764 2253 101 10 0 chr17 19970270 19970567 -69533986 - AluSc SINE Alu -9 300 1 6288 141 8 15 chr17 19970567 19971387 -69533166 - L1MA7 LINE L1 -527 5764 4959 578 283 30 34 chr17 19971517 19971754 -69532799 + L1MC4a LINE L1 7082 7317 -491 1940 155 100 50 chr17 19971758 19971983 -69532570 - MSTB1 LTR MaLR -13 419 163 2463 35 0 3 chr17 19971983 19972323 -69532230 + AluY SINE Alu 1 339 0 1940 155 100 50 chr17 19972323 19972495 -69532058 - MSTB1 LTR MaLR -269 163 1 318 301 44 0 chr17 19972498 19972611 -69531942 + L1MC4 LINE L1 7396 7513 -529 581 266 63 36 chr17 19972700 19973034 -69531519 + L1MC4 LINE L1 7561 7903 -139 267 103 0 0 chr17 19973038 19973077 -69531476 + (TG)n Simple_repeat Simple_repeat 2 40 0 2215 100 13 0 chr17 19973358 19973657 -69530896 + AluSc SINE Alu 1 303 -6 1293 218 61 58 chr17 19973977 19974340 -69530213 + MLT1A1 LTR MaLR 2 365 0 392 271 42 17 chr17 19974602 19974720 -69529833 - MIR SINE MIR -123 139 19 2275 77 7 3 chr17 19974859 19975157 -69529396 + AluSq SINE Alu 2 300 -13 738 266 43 3 chr17 19975375 19975657 -69528896 + L1 LINE L1 3108 3400 -2746 721 126 47 0 chr17 19976098 19976225 -69528328 + FLAM_C SINE Alu 1 133 0 2484 70 0 3 chr17 19976551 19976853 -69527700 - AluSg SINE Alu -8 302 2 28 61 0 0 chr17 19976941 19976990 -69527563 + AT_rich Low_complexity Low_complexity 1 49 0 314 248 168 29 chr17 19977171 19977308 -69527245 + L1ME LINE L1 335 490 -5580 2067 143 3 0 chr17 19977728 19978029 -69526524 + AluSx SINE Alu 2 303 -9 222 306 20 51 chr17 19978337 19978435 -69526118 + L2 LINE L2 2323 2417 -897 222 118 0 0 chr17 19979332 19979366 -69525187 + (T)n Simple_repeat Simple_repeat 1 34 0 1459 97 14 5 chr17 19980069 19980276 -69524277 - AluSc SINE Alu -15 294 86 1018 98 0 0 chr17 19980935 19981068 -69523485 - AluSq/x SINE Alu -180 133 1 6291 230 40 87 chr17 19981115 19981571 -69522982 + L1M4 LINE L1 2656 3132 -3014 2146 161 66 21 chr17 19981571 19981950 -69522603 + MSTD LTR MaLR 1 396 0 6291 230 40 87 chr17 19981950 19982316 -69522237 + L1M4 LINE L1 3132 3514 -2632 1908 84 0 24 chr17 19982316 19982567 -69521986 - AluSc SINE Alu -26 283 39 6291 230 40 87 chr17 19982567 19982636 -69521917 + L1M4 LINE L1 3514 3585 -2561 2429 90 0 0 chr17 19982636 19982936 -69521617 - AluSg SINE Alu -10 300 1 6291 230 40 87 chr17 19982936 19983893 -69520660 + L1M4 LINE L1 3585 4585 -1561 1739 156 3 7 chr17 19983893 19984219 -69520334 + AluJb SINE Alu 3 327 0 6291 230 40 87 chr17 19984219 19984472 -69520081 + L1M4 LINE L1 4585 4848 -1298 1549 181 3 66 chr17 19984472 19984792 -69519761 + AluJo SINE Alu 6 305 -7 6291 230 40 87 chr17 19984792 19984919 -69519634 + L1M4 LINE L1 4848 4979 -1167 4687 136 32 73 chr17 19984919 19985850 -69518703 + L1MA4 LINE L1 5408 6300 0 6291 230 40 87 chr17 19985850 19986253 -69518300 + L1M4 LINE L1 4979 5169 -977 1297 132 0 44 chr17 19986280 19986484 -69518069 + AluSg/x SINE Alu 101 295 -17 316 231 20 68 chr17 19986490 19986570 -69517983 + L1M4 LINE L1 5157 5228 -918 1597 183 111 63 chr17 19986570 19986906 -69517647 - MSTD LTR MaLR 0 396 38 2175 100 0 7 chr17 19986906 19987212 -69517341 + AluSg SINE Alu 1 304 0 1597 183 111 63 chr17 19987212 19987252 -69517301 - MSTD LTR MaLR -358 38 1 316 231 20 68 chr17 19987252 19987318 -69517235 + L1M4 LINE L1 5228 5296 -850 1934 130 28 87 chr17 19987320 19987468 -69517085 + L1MB5 LINE L1 5789 5944 -230 2388 88 0 3 chr17 19987468 19987776 -69516777 + AluSc SINE Alu 1 307 -2 1934 130 28 87 chr17 19987776 19988019 -69516534 + L1MB5 LINE L1 5944 6157 -17 708 180 43 7 chr17 19988046 19988185 -69516368 - MSTD LTR MaLR -249 147 4 1535 154 122 0 chr17 19989840 19990126 -69514427 + MSTB1 LTR MaLR 99 419 -13 2135 74 49 7 chr17 19990176 19990461 -69514092 - AluSg SINE Alu -13 297 1 2040 154 102 0 chr17 19990603 19990966 -69513587 + MSTC LTR MaLR 29 428 0 1983 153 17 11 chr17 19993128 19993481 -69511072 + L1MC1 LINE L1 5789 6143 -190 3326 159 12 2 chr17 19993498 19994058 -69510495 - L1MB3 LINE L1 -45 6138 5573 2735 108 5 0 chr17 19994075 19994462 -69510091 + L1PB3 LINE L1 5440 5828 -326 894 143 11 53 chr17 19994460 19994662 -69509891 - L1MB3 LINE L1 -690 5490 5293 * 5781 138 52 13 chr17 19994699 19994815 -69509738 - L1MA8 LINE L1 -5 6286 6176 2436 84 0 0 chr17 19994815 19995112 -69509441 - AluSp SINE Alu -16 297 1 5781 138 52 13 chr17 19995112 19997026 -69507527 - L1MA8 LINE L1 -115 6176 4120 257 191 0 107 chr17 19997019 19997103 -69507450 + L1MC/D LINE L1 5684 5758 -601 * 328 238 119 19 chr17 19997131 19997291 -69507262 - L1ME4a LINE L1 -237 5884 5709 403 282 117 29 chr17 19999298 19999504 -69505049 + L1ME LINE L1 5519 5742 -379 1160 259 150 13 chr17 19999566 19999945 -69504608 - LTR16A LTR ERVL -5 445 15 428 212 59 0 chr17 20000694 20000779 -69503774 - Tigger5 DNA MER2_type 0 2323 2234 383 161 0 0 chr17 20000784 20000840 -69503713 - Tigger5 DNA MER2_type -2267 56 1 852 291 120 48 chr17 20000985 20001688 -69502865 + L1MEc LINE L1 856 1671 -4725 2514 54 0 16 chr17 20001688 20002004 -69502549 + AluY SINE Alu 1 311 0 852 291 120 48 chr17 20002004 20002413 -69502140 + L1MEc LINE L1 1671 2049 -4347 684 115 64 70 chr17 20002433 20002468 -69502085 - Charlie1 DNA MER1_type -6 2755 2721 2413 79 7 7 chr17 20002468 20002772 -69501781 - AluSp SINE Alu -9 304 1 684 115 64 70 chr17 20002772 20002893 -69501660 - Charlie1 DNA MER1_type -40 2721 2600 1985 121 21 3 chr17 20002895 20003184 -69501369 + AluY SINE Alu 1 294 -17 1019 227 36 73 chr17 20003184 20003395 -69501158 + L1MEc LINE L1 2660 2853 -3362 1990 136 0 11 chr17 20003395 20003736 -69500817 + AluSx SINE Alu 1 338 0 1019 227 36 73 chr17 20003736 20003907 -69500646 + L1MEc LINE L1 2853 3029 -3186 2971 230 59 21 chr17 20003919 20004406 -69500147 + L1ME1 LINE L1 4980 5447 -719 2123 107 0 23 chr17 20004406 20004716 -69499837 + AluSc SINE Alu 1 303 -6 2971 230 59 21 chr17 20004716 20005375 -69499178 + L1ME1 LINE L1 5447 6161 -5 763 284 91 54 chr17 20005379 20006235 -69498318 + L1MEc LINE L1 3029 3916 -2299 1604 121 78 53 chr17 20006240 20006436 -69498117 + L1MB3 LINE L1 5847 6056 -127 2407 71 0 0 chr17 20006436 20006733 -69497820 - AluY SINE Alu -14 297 1 1604 121 78 53 chr17 20006733 20006858 -69497695 + L1MB3 LINE L1 6056 6176 -7 1090 229 155 28 chr17 20006870 20007287 -69497266 + L1MEc LINE L1 3909 4410 -1805 411 21 0 0 chr17 20007287 20007335 -69497218 + (TA)n Simple_repeat Simple_repeat 2 49 0 1090 229 155 28 chr17 20007335 20007453 -69497100 + L1MEc LINE L1 4410 4512 -1703 207 0 0 0 chr17 20007887 20007910 -69496643 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1232 124 142 31 chr17 20009445 20009670 -69494883 + AluSx SINE Alu 53 302 -10 405 275 41 45 chr17 20009693 20009921 -69494632 + L1MEc LINE L1 4562 4790 -1425 2514 138 65 14 chr17 20009921 20010334 -69494219 + Tigger2a DNA MER2_type 1 434 0 405 275 41 45 chr17 20010334 20010349 -69494204 + L1MEc LINE L1 4790 4804 -1411 1065 238 94 18 chr17 20010403 20010973 -69493580 + L1M3 LINE L1 4896 5513 -736 231 278 0 0 chr17 20012005 20012059 -69492494 + L2 LINE L2 3242 3295 -18 324 251 64 106 chr17 20012077 20012312 -69492241 - L1ME4a LINE L1 -2 6119 5895 525 274 58 90 chr17 20012340 20012991 -69491562 - L1ME4a LINE L1 -96 6025 5379 265 270 117 29 chr17 20013043 20013350 -69491203 + L1M4 LINE L1 4997 5330 -816 1590 118 9 64 chr17 20215163 20215492 -69289061 + AluSx SINE Alu 1 311 -1 342 229 125 62 chr17 20215671 20215815 -69288738 + MIR SINE MIR 3 155 -107 218 357 87 8 chr17 20215996 20216122 -69288431 + MIR SINE MIR 119 254 -8 1000 134 0 0 chr17 20216376 20216518 -69288035 - AluSg/x SINE Alu -15 297 156 364 276 31 0 chr17 20217131 20217229 -69287324 - MIR SINE MIR -122 140 40 1678 127 39 18 chr17 20217819 20218128 -69286425 - AluSx SINE Alu 0 315 1 270 212 71 12 chr17 20218942 20219027 -69285526 + MLT1C LTR MaLR 17 106 -399 1023 145 100 104 chr17 20219043 20219156 -69285397 + AluJo SINE Alu 1 113 -199 2185 68 10 14 chr17 20219156 20219449 -69285104 - AluSq SINE Alu -21 292 1 2398 62 3 3 chr17 20219455 20219760 -69284793 - AluY SINE Alu -6 305 1 1023 145 100 104 chr17 20219760 20219908 -69284645 + AluJo SINE Alu 118 268 -44 941 207 12 0 chr17 20219954 20220118 -69284435 + FRAM SINE Alu 1 166 0 423 194 231 36 chr17 20220118 20220365 -69284188 + MLT1C LTR MaLR 173 467 0 22 56 0 0 chr17 20220489 20220525 -69284028 + AT_rich Low_complexity Low_complexity 1 36 0 1803 128 7 11 chr17 20220528 20220809 -69283744 + AluSg SINE Alu 1 280 -30 21 57 0 0 chr17 20221359 20221394 -69283159 + GC_rich Low_complexity Low_complexity 1 35 0 222 310 0 60 chr17 20221546 20221646 -69282907 + MIR SINE MIR 60 153 -109 226 333 29 29 chr17 20222430 20222535 -69282018 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 20222553 20222631 -69281922 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 20222963 20223015 -69281538 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 20223549 20223641 -69280912 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 20223775 20223879 -69280674 + MIR SINE MIR 17 121 -141 290 282 78 0 chr17 20224270 20224373 -69280180 - L2 LINE L2 -245 3027 2917 225 267 47 12 chr17 20225348 20225434 -69279119 - L2 LINE L2 -261 3011 2923 2123 103 3 7 chr17 20226852 20227143 -69277410 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 20227150 20227454 -69277099 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 20230153 20230258 -69274295 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 20231025 20231086 -69273467 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 20232108 20232151 -69272402 + AT_rich Low_complexity Low_complexity 1 43 0 2279 82 7 7 chr17 20232425 20232731 -69271822 + AluY SINE Alu 1 306 -5 483 285 66 86 chr17 20233590 20233958 -69270595 - L1MCa LINE L1 -2732 3694 2194 488 180 0 50 chr17 20233968 20234068 -69270485 + AluSg/x SINE Alu 194 288 -22 1787 116 0 4 chr17 20234158 20234400 -69270153 - AluSx SINE Alu -71 241 1 269 194 113 0 chr17 20234426 20234488 -69270065 + MIR3 SINE MIR 86 154 -54 2356 85 0 0 chr17 20234838 20235132 -69269421 - AluSg SINE Alu -16 294 1 1702 145 76 0 chr17 20235136 20235412 -69269141 - AluJb SINE Alu -15 297 1 1662 78 9 0 chr17 20235421 20235638 -69268915 - AluSg/x SINE Alu -9 303 85 2258 95 0 3 chr17 20235641 20235946 -69268607 - AluSg SINE Alu -6 304 1 187 333 156 0 chr17 20236531 20236621 -69267932 + L2 LINE L2 3189 3292 -21 1384 164 25 12 chr17 20236621 20236865 -69267688 - AluSx SINE Alu -11 301 55 233 322 116 39 chr17 20239323 20239556 -69264997 + L2 LINE L2 2804 3054 -218 2246 71 3 3 chr17 20239568 20239863 -69264690 - AluY SINE Alu -16 295 1 316 312 136 16 chr17 20241952 20242077 -69262476 + MIR3 SINE MIR 55 194 -14 1492 154 56 25 chr17 20242178 20242464 -69262089 - AluJo SINE Alu -17 295 1 1665 185 48 0 chr17 20242474 20242766 -69261787 - AluSx SINE Alu -6 306 1 2061 126 10 0 chr17 20242774 20243075 -69261478 - AluSp SINE Alu -9 304 1 729 185 0 8 chr17 20244099 20244218 -69260335 + FLAM_C SINE Alu 1 118 -25 2229 107 3 0 chr17 20244225 20244525 -69260028 - AluSc SINE Alu -8 301 1 29 0 0 0 chr17 20244526 20244555 -69259998 + AT_rich Low_complexity Low_complexity 1 29 0 2310 77 3 7 chr17 20244983 20245293 -69259260 - AluY SINE Alu -2 309 1 847 178 41 0 chr17 20245303 20245449 -69259104 - AluJb SINE Alu -23 289 138 868 9 0 18 chr17 20245457 20245568 -69258985 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 1753 130 50 11 chr17 20245568 20245836 -69258717 - AluSx SINE Alu -30 282 1 1924 128 31 0 chr17 20247195 20247484 -69257069 - AluSx SINE Alu -14 298 1 2152 153 239 29 chr17 20250328 20250787 -69253766 + L1MC3 LINE L1 6906 7267 -518 1812 141 10 35 chr17 20250787 20251099 -69253454 + AluSx SINE Alu 1 304 -8 2152 153 239 29 chr17 20251099 20251358 -69253195 + L1MC3 LINE L1 7267 7775 -10 190 299 52 41 chr17 20251385 20251482 -69253071 + MIR SINE MIR 21 118 -90 799 227 0 0 chr17 20251483 20251633 -69252920 + AluJo SINE Alu 114 263 -49 2100 90 22 4 chr17 20252857 20253134 -69251419 + AluSx SINE Alu 1 282 -30 2291 33 0 60 chr17 20253633 20253934 -69250619 - AluY SINE Alu -28 283 1 802 141 0 8 chr17 20253937 20254065 -69250488 - AluJo/FLAM SINE Alu -181 131 5 234 282 239 8 chr17 20254067 20254184 -69250369 + MIR SINE MIR 119 262 0 194 320 100 10 chr17 20254248 20254348 -69250205 + L2 LINE L2 3186 3294 -19 263 278 56 0 chr17 20254396 20254486 -69250067 - MIR3 SINE MIR -53 155 61 266 319 11 0 chr17 20257575 20257669 -69246884 + MIR SINE MIR 58 152 -56 191 175 75 0 chr17 20257724 20257764 -69246789 - MIR SINE MIR -73 135 93 2212 104 0 0 chr17 20260208 20260505 -69244048 + AluSc SINE Alu 1 297 -12 813 128 0 0 chr17 20260512 20260819 -69243734 + AluSp SINE Alu 1 307 0 1595 209 36 25 chr17 20260841 20261200 -69243353 - MLT1A1 LTR MaLR -2 363 1 2217 85 0 7 chr17 20261376 20261670 -69242883 - AluSc SINE Alu -17 292 1 337 243 93 28 chr17 20262192 20262299 -69242254 + MIR SINE MIR 113 226 -36 1166 188 58 0 chr17 20263236 20263459 -69241094 + AluJo SINE Alu 1 236 -76 495 160 0 0 chr17 20263473 20263548 -69241005 - AluJ/FLAM SINE Alu -220 92 18 1836 152 10 10 chr17 20263567 20263869 -69240684 - AluSx SINE Alu -10 302 1 2236 179 63 72 chr17 20264167 20264726 -69239827 - MLT2B3 LTR ERVL 0 554 1 2299 64 0 0 chr17 20265114 20265429 -69239124 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 20268003 20268370 -69236183 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 20269491 20269784 -69234769 - AluSx SINE Alu -21 291 1 425 243 19 10 chr17 20271150 20271253 -69233300 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 20271960 20272014 -69232539 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 20274237 20274270 -69230283 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 20276550 20276855 -69227698 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 20276882 20276996 -69227557 - MIR3 SINE MIR -54 154 63 241 256 61 12 chr17 20278649 20278731 -69225822 + MIR SINE MIR 59 144 -118 214 333 14 0 chr17 20279599 20279668 -69224885 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 20279903 20280124 -69224429 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 20280125 20280471 -69224082 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 20280814 20281110 -69223443 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 20281541 20281593 -69222960 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 20281893 20281938 -69222615 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 20281982 20282011 -69222542 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 20282195 20282364 -69222189 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 268 207 44 44 chr17 20282593 20282728 -69221825 + (CCCGG)n Simple_repeat Simple_repeat 2 136 0 41 83 0 23 chr17 20282841 20282973 -69221580 + GC_rich Low_complexity Low_complexity 1 129 0 185 342 40 0 chr17 20283277 20283353 -69221200 + MIR SINE MIR 90 168 -94 212 352 48 0 chr17 20283383 20283508 -69221045 + L2 LINE L2 2894 3024 -248 398 317 32 0 chr17 20284046 20284169 -69220384 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 20284252 20284305 -69220248 + MIR SINE MIR 16 72 -136 1647 136 13 53 chr17 20284332 20284634 -69219919 + AluJb SINE Alu 1 290 -22 1683 123 105 7 chr17 20284634 20284919 -69219634 + AluSq SINE Alu 1 313 0 705 190 0 14 chr17 20284923 20285065 -69219488 + MIR SINE MIR 51 190 -72 2740 83 33 7 chr17 20285065 20285451 -69219102 + MER41A LTR ERV1 1 400 -154 2107 110 7 0 chr17 20285451 20285743 -69218810 + AluSp SINE Alu 1 294 -19 2740 83 33 7 chr17 20285743 20285775 -69218778 + MER41A LTR ERV1 400 430 -124 2205 132 0 0 chr17 20285778 20286089 -69218464 - AluSx SINE Alu 0 312 2 2136 114 0 25 chr17 20286101 20286416 -69218137 - AluY SINE Alu -4 307 1 220 228 166 48 chr17 20286716 20286861 -69217692 + MER5A DNA MER1_type 5 166 -23 405 290 39 91 chr17 20287413 20287556 -69216997 + MIR SINE MIR 31 159 -103 2135 93 0 3 chr17 20287556 20287847 -69216706 + AluY SINE Alu 1 290 -21 405 290 39 91 chr17 20287847 20287934 -69216619 + MIR SINE MIR 159 249 -13 1971 109 23 46 chr17 20287951 20288255 -69216298 + AluSg SINE Alu 1 297 -13 2115 103 6 58 chr17 20288271 20288406 -69216147 + AluSx SINE Alu 1 141 -171 1810 147 23 3 chr17 20288406 20288712 -69215841 + AluSq SINE Alu 2 313 0 2115 103 6 58 chr17 20288712 20288905 -69215648 + AluSx SINE Alu 141 312 0 274 295 66 43 chr17 20289674 20289845 -69214708 - MIR3 SINE MIR -17 191 16 249 180 33 16 chr17 20290057 20290118 -69214435 + MIR SINE MIR 102 163 -99 * 524 170 36 40 chr17 20290107 20290288 -69214265 - MIR SINE MIR -2 260 33 2292 75 0 40 chr17 20291013 20291335 -69213218 - AluSc SINE Alu 0 309 1 305 107 0 36 chr17 20291335 20291391 -69213162 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 2063 133 10 0 chr17 20291401 20291703 -69212850 - AluSq SINE Alu -8 305 1 199 185 169 0 chr17 20291734 20291799 -69212754 + L2 LINE L2 2671 2746 -568 1135 157 129 11 chr17 20291808 20292094 -69212459 - MER63 DNA MER1_type -1 1061 742 442 186 23 23 chr17 20292099 20292185 -69212368 - FRAM/FAM SINE Alu -90 86 1 387 184 29 0 chr17 20292202 20292305 -69212248 - Charlie5 DNA MER1_type -27 2585 2480 931 79 0 8 chr17 20292307 20292434 -69212119 - AluSg/x SINE Alu -8 304 179 731 152 74 29 chr17 20292459 20292481 -69212072 - MER33 DNA MER1_type -97 65 45 1664 139 65 24 chr17 20292481 20292775 -69211778 - AluSx SINE Alu -6 306 1 731 152 74 29 chr17 20292775 20292959 -69211594 - MER33 DNA MER1_type -117 45 1 227 140 18 0 chr17 20292952 20292979 -69211574 - MER63 DNA MER1_type -405 656 631 * 2195 96 20 3 chr17 20292979 20293280 -69211273 + AluY SINE Alu 1 306 -5 227 140 18 0 chr17 20293280 20293309 -69211244 - MER63 DNA MER1_type -430 631 599 799 133 25 0 chr17 20293595 20293715 -69210838 - AluSq/x SINE Alu -190 123 1 238 349 57 9 chr17 20294714 20294820 -69209733 + MIR SINE MIR 82 192 -70 2196 112 3 0 chr17 20294830 20295135 -69209418 - AluSx SINE Alu -6 306 1 298 308 108 15 chr17 20295639 20295769 -69208784 - MIR SINE MIR -73 189 48 2244 73 0 42 chr17 20295994 20296307 -69208246 - AluY SINE Alu -11 300 1 2152 122 0 0 chr17 20296313 20296616 -69207937 - AluSg SINE Alu -7 303 1 803 224 93 24 chr17 20297800 20298005 -69206548 + MER20 DNA MER1_type 1 219 0 349 371 114 15 chr17 20298136 20298408 -69206145 + L2 LINE L2 2969 3267 -5 291 326 155 5 chr17 20298403 20298590 -69205963 - MIR SINE MIR -1 261 47 * 28 0 0 0 chr17 20299986 20300014 -69204539 + AT_rich Low_complexity Low_complexity 1 28 0 327 121 0 0 chr17 20301014 20301072 -69203481 + (CGG)n Simple_repeat Simple_repeat 1 58 0 1767 115 42 11 chr17 20302532 20302819 -69201734 + AluJb SINE Alu 2 297 -15 201 147 0 0 chr17 20303115 20303149 -69201404 + (CCCCCT)n Simple_repeat Simple_repeat 5 38 0 1661 135 31 24 chr17 20303152 20303441 -69201112 - AluJb SINE Alu -21 291 1 916 237 66 0 chr17 20303466 20303677 -69200876 - MIR SINE MIR -15 247 23 197 328 103 60 chr17 20304310 20304612 -69199941 + L2 LINE L2 2466 2780 -534 2092 128 0 0 chr17 20304613 20304909 -69199644 - AluSx SINE Alu -16 296 1 2006 131 13 0 chr17 20304922 20305228 -69199325 - AluSx SINE Alu -2 310 1 180 359 16 0 chr17 20305423 20305487 -69199066 + L2 LINE L2 3249 3313 0 361 238 0 12 chr17 20305624 20305708 -69198845 - L2 LINE L2 -1 3312 3230 235 279 49 66 chr17 20305707 20305829 -69198724 + L2 LINE L2 2940 3059 -213 * 209 266 89 13 chr17 20306438 20306517 -69198036 - MIR SINE MIR -69 139 55 490 281 7 40 chr17 20306804 20307016 -69197537 + MIR SINE MIR 3 206 -56 2438 67 0 0 chr17 20307016 20307313 -69197240 - AluSc SINE Alu -12 297 1 611 294 92 0 chr17 20307585 20307769 -69196784 - MIR SINE MIR -19 243 43 246 250 40 50 chr17 20307946 20308046 -69196507 - MIR SINE MIR -65 143 45 311 299 255 10 chr17 20308066 20308270 -69196283 + L2 LINE L2 3019 3272 0 1089 275 154 16 chr17 20308391 20308513 -69196040 - L2 LINE L2 0 3313 3209 2298 144 52 80 chr17 20308513 20308567 -69195986 + MSTB LTR MaLR 1 55 -371 1958 120 40 3 chr17 20308567 20308866 -69195687 + AluSx SINE Alu 1 310 -2 2298 144 52 80 chr17 20308866 20309249 -69195304 + MSTB LTR MaLR 55 426 0 1089 275 154 16 chr17 20309249 20309562 -69194991 - L2 LINE L2 -104 3209 2818 1934 151 0 16 chr17 20309807 20310112 -69194441 + AluSx SINE Alu 1 300 -12 915 140 0 22 chr17 20310184 20310320 -69194233 + FLAM_C SINE Alu 1 133 0 1538 133 80 39 chr17 20310774 20311060 -69193493 - AluJo SINE Alu -11 301 4 525 174 37 37 chr17 20311708 20311817 -69192736 + MIR SINE MIR 34 142 -66 274 172 0 78 chr17 20311815 20311879 -69192674 - L2 LINE L2 -4 3309 3251 * 642 178 23 31 chr17 20311953 20312082 -69192471 - BC200 scRNA scRNA -60 140 13 1324 223 68 8 chr17 20312092 20312459 -69192094 + LTR16C LTR ERVL 100 488 -3 1797 141 67 48 chr17 20312477 20312853 -69191700 + MLT1B LTR MaLR 1 383 -7 616 302 6 12 chr17 20312857 20313026 -69191527 - MIR SINE MIR -40 222 55 367 287 11 0 chr17 20313954 20314048 -69190505 - MIR SINE MIR -97 165 71 451 309 179 0 chr17 20314452 20314653 -69189900 + MIR SINE MIR 16 252 -10 1673 146 3 44 chr17 20314732 20315073 -69189480 + AluJb SINE Alu 1 329 0 758 198 79 0 chr17 20315191 20315368 -69189185 + Charlie1b DNA MER1_type 72 262 -261 1148 114 0 34 chr17 20315405 20315581 -69188972 - AluJb SINE Alu -3 309 140 593 97 164 12 chr17 20315586 20315751 -69188802 + Charlie1b DNA MER1_type 277 466 -57 1134 137 0 0 chr17 20315753 20315914 -69188639 - AluSg/x SINE Alu -17 293 133 1968 118 3 14 chr17 20315924 20316238 -69188315 - AluSq SINE Alu 0 311 1 435 19 0 0 chr17 20316238 20316290 -69188263 + (TTA)n Simple_repeat Simple_repeat 2 53 0 2062 98 0 37 chr17 20316290 20316586 -69187967 - AluSq SINE Alu -28 285 1 282 125 107 0 chr17 20316588 20316644 -69187909 + Charlie1b DNA MER1_type 462 523 0 766 149 7 84 chr17 20316700 20316812 -69187741 + AluJo SINE Alu 1 99 -213 2330 77 3 13 chr17 20316812 20317122 -69187431 - AluY SINE Alu -4 307 1 766 149 7 84 chr17 20317122 20317163 -69187390 + AluJo SINE Alu 99 142 -170 217 176 20 0 chr17 20317209 20317260 -69187293 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 351 318 16 0 chr17 20317269 20317395 -69187158 - L1ME LINE L1 -340 5781 5654 371 285 32 81 chr17 20318115 20318301 -69186252 - MER5A DNA MER1_type -3 186 10 225 340 45 0 chr17 20319109 20319209 -69185344 + MIR SINE MIR 40 147 -61 610 212 30 86 chr17 20319654 20319685 -69184868 + MIR SINE MIR 74 105 -157 2821 151 44 42 chr17 20319685 20320189 -69184364 + MLT1D LTR MaLR 1 505 0 610 212 30 86 chr17 20320189 20320295 -69184258 + MIR SINE MIR 105 215 -47 1490 111 194 0 chr17 20320295 20320548 -69184005 - AluSp SINE Alu -11 302 1 1997 139 27 3 chr17 20320548 20320848 -69183705 - AluSx SINE Alu -4 308 1 610 212 30 86 chr17 20320848 20320906 -69183647 + MIR SINE MIR 213 260 -2 219 258 48 0 chr17 20321438 20321500 -69183053 - L2 LINE L2 -214 3058 2994 359 319 106 0 chr17 20321824 20321965 -69182588 + MIR SINE MIR 20 175 -87 2433 83 0 0 chr17 20322376 20322688 -69181865 - AluSx SINE Alu 0 312 1 431 239 80 0 chr17 20322897 20323035 -69181518 - MIR SINE MIR -65 197 49 1297 230 144 45 chr17 20324674 20325166 -69179387 + MLT1K LTR MaLR 48 588 0 252 302 0 0 chr17 20325166 20325233 -69179320 - MIR SINE MIR -64 144 86 215 83 0 0 chr17 20326363 20326398 -69178155 - MIR SINE MIR -115 147 114 338 329 16 13 chr17 20327769 20327933 -69176620 - MIR SINE MIR -33 175 27 263 293 22 89 chr17 20328905 20329063 -69175490 - L2 LINE L2 -284 2988 2841 390 250 67 0 chr17 20329737 20329841 -69174712 + MIR SINE MIR 35 145 -63 231 240 60 70 chr17 20330927 20331027 -69173526 + MIR3 SINE MIR 109 207 -1 29 0 0 0 chr17 20331673 20331702 -69172851 + AT_rich Low_complexity Low_complexity 1 29 0 2209 80 0 3 chr17 20331702 20331991 -69172562 - AluSq SINE Alu -25 288 1 1193 97 0 0 chr17 20332129 20332284 -69172269 - AluSc SINE Alu -154 155 1 621 278 167 29 chr17 20332286 20332860 -69171693 - L2 LINE L2 -27 3286 2658 * 684 261 22 0 chr17 20332851 20333031 -69171522 + MIR SINE MIR 9 192 -70 277 320 30 14 chr17 20335113 20335262 -69169291 - MIR SINE MIR -44 218 67 1144 146 12 0 chr17 20335430 20335601 -69168952 - FRAM SINE Alu -5 171 1 191 271 17 0 chr17 20336017 20336076 -69168477 + MIR SINE MIR 79 138 -70 205 321 45 75 chr17 20337729 20337863 -69166690 + MIR SINE MIR 14 143 -119 596 272 71 0 chr17 20338114 20338298 -69166255 - MIR SINE MIR -29 233 37 437 224 10 0 chr17 20338367 20338465 -69166088 - MIR SINE MIR -21 241 143 1838 155 0 17 chr17 20338466 20338763 -69165790 - AluJo SINE Alu -20 292 1 370 267 0 0 chr17 20338764 20338854 -69165699 - U13 snRNA snRNA -14 90 1 727 234 0 0 chr17 20338855 20339000 -69165553 - MIR SINE MIR -115 147 3 259 333 28 35 chr17 20339041 20339182 -69165371 - L3b LINE CR1 -170 1413 1274 1825 157 14 3 chr17 20339688 20339974 -69164579 - AluJb SINE Alu -23 289 1 391 276 92 51 chr17 20340342 20340559 -69163994 + L2 LINE L2 2967 3192 -80 21 0 0 0 chr17 20340584 20340605 -69163948 + AT_rich Low_complexity Low_complexity 1 21 0 215 310 86 0 chr17 20340998 20341115 -69163438 - MIR SINE MIR -62 146 44 219 328 0 0 chr17 20342015 20342076 -69162477 + GA-rich Low_complexity Low_complexity 6 66 0 363 305 202 15 chr17 20342298 20342501 -69162052 - MIR SINE MIR -2 260 20 348 205 13 13 chr17 20342785 20342863 -69161690 - MIR SINE MIR -79 129 52 261 152 0 0 chr17 20343036 20343082 -69161471 - L3 LINE CR1 -106 1471 1426 296 247 0 13 chr17 20343879 20343956 -69160597 - MER91B DNA MER1_type -28 162 87 226 321 71 27 chr17 20343969 20344081 -69160472 - MER91B DNA MER1_type -60 130 14 257 133 0 22 chr17 20344135 20344180 -69160373 - MER91B DNA MER1_type -152 44 1 275 307 0 59 chr17 20344426 20344527 -69160026 - MIR SINE MIR -88 174 80 190 258 91 30 chr17 20345030 20345096 -69159457 - L3 LINE CR1 -102 1475 1406 192 216 0 0 chr17 20346075 20346112 -69158441 - MIR SINE MIR -114 148 112 628 247 18 30 chr17 20346241 20346407 -69158146 - MIR SINE MIR -79 183 20 300 349 34 51 chr17 20346900 20347075 -69157478 + L2 LINE L2 3007 3178 -94 180 274 71 12 chr17 20347096 20347180 -69157373 - MIR SINE MIR -74 134 46 260 192 0 0 chr17 20347390 20347442 -69157111 - L3 LINE CR1 -111 1466 1415 1014 261 70 0 chr17 20347994 20348235 -69156318 + MIR SINE MIR 1 258 -4 196 282 109 55 chr17 20348449 20348559 -69155994 + L2 LINE L2 3197 3312 -1 554 268 78 52 chr17 20349187 20349418 -69155135 - L2 LINE L2 -117 3155 2919 2307 82 3 10 chr17 20349765 20350069 -69154484 + AluSp SINE Alu 1 302 -11 1293 95 0 0 chr17 20350069 20350238 -69154315 + AluSq SINE Alu 135 303 -10 1699 138 49 23 chr17 20350240 20350544 -69154009 + AluJo SINE Alu 1 312 0 875 139 0 53 chr17 20350654 20350805 -69153748 - FLAM_C SINE Alu 0 143 1 231 294 76 8 chr17 20350835 20350954 -69153599 + L1P LINE L1 4918 5044 -1102 21 36 0 0 chr17 20351019 20351047 -69153506 + AT_rich Low_complexity Low_complexity 1 28 0 2249 80 0 3 chr17 20351117 20351440 -69153113 + AluSc SINE Alu 1 322 0 1935 99 0 51 chr17 20351448 20351740 -69152813 + AluSx SINE Alu 1 277 -35 369 313 16 49 chr17 20351758 20351953 -69152600 + L1M4 LINE L1 5171 5367 -779 791 220 13 0 chr17 20352421 20352580 -69151973 - MIR SINE MIR 0 262 102 1174 288 40 19 chr17 20353303 20353730 -69150823 - L2 LINE L2 -25 3288 2853 453 19 0 0 chr17 20354530 20354584 -69149969 + (CA)n Simple_repeat Simple_repeat 2 55 0 456 265 262 16 chr17 20354823 20355208 -69149345 + L2 LINE L2 2833 3312 -1 2048 123 7 3 chr17 20355223 20355531 -69149022 + AluSc SINE Alu 1 309 0 531 226 153 15 chr17 20355598 20355735 -69148818 - MIR SINE MIR -18 244 89 242 280 11 75 chr17 20355905 20355998 -69148555 - MIR3 SINE MIR -47 161 75 275 290 253 20 chr17 20356132 20356429 -69148124 + MLT1K LTR MaLR 142 507 -81 363 328 46 0 chr17 20356617 20356748 -69147805 + MIR SINE MIR 108 244 -18 565 303 160 33 chr17 20357076 20357530 -69147023 + L2 LINE L2 2248 2643 -670 186 103 0 0 chr17 20357530 20357559 -69146994 + (TA)n Simple_repeat Simple_repeat 2 30 0 565 303 160 33 chr17 20357559 20357706 -69146847 + L2 LINE L2 2643 3313 0 2258 65 3 46 chr17 20359655 20359978 -69144575 - AluY SINE Alu -2 309 1 488 244 16 24 chr17 20360318 20360445 -69144108 + MIR SINE MIR 46 171 -91 463 297 152 12 chr17 20360510 20360675 -69143878 - MIR SINE MIR -44 218 31 194 295 114 48 chr17 20362799 20362904 -69141649 - MIR SINE MIR -70 192 81 22 0 0 0 chr17 20364137 20364159 -69140394 + GC_rich Low_complexity Low_complexity 1 22 0 330 244 28 44 chr17 20364483 20364663 -69139890 + G-rich Low_complexity Low_complexity 2 178 0 224 315 0 0 chr17 20366516 20366589 -69137964 + CT-rich Low_complexity Low_complexity 1 73 0 241 381 24 8 chr17 20366963 20367089 -69137464 - MIR SINE MIR -88 174 47 426 259 50 22 chr17 20367338 20367477 -69137076 + MIR3 SINE MIR 15 157 -51 266 341 77 0 chr17 20367942 20368033 -69136520 + MIR SINE MIR 51 148 -114 237 313 12 0 chr17 20368093 20368173 -69136380 + CT-rich Low_complexity Low_complexity 2 82 0 2157 121 3 0 chr17 20368444 20368750 -69135803 - AluSx SINE Alu -5 307 1 458 256 135 25 chr17 20368850 20369026 -69135527 - MIR SINE MIR -65 143 3 488 249 165 17 chr17 20369287 20369524 -69135029 - L2 LINE L2 0 3313 3042 1344 279 168 44 chr17 20369579 20369759 -69134794 - L2 LINE L2 -412 2902 2746 2106 123 3 0 chr17 20369759 20370052 -69134501 - AluSx SINE Alu -18 294 1 1344 279 168 44 chr17 20370052 20370828 -69133725 - L2 LINE L2 -568 2746 1827 2228 113 0 3 chr17 20370837 20371147 -69133406 + AluSq SINE Alu 1 309 -4 313 167 61 53 chr17 20371150 20371264 -69133289 + L1MB8 LINE L1 6064 6178 0 411 286 40 0 chr17 20371377 20371503 -69133050 + L1MC4a LINE L1 5768 5898 -1910 432 0 0 0 chr17 20371545 20371593 -69132960 + (TG)n Simple_repeat Simple_repeat 2 49 0 1784 150 66 0 chr17 20371623 20371909 -69132644 - AluSx SINE Alu -2 310 6 1352 176 83 7 chr17 20371959 20372237 -69132316 + AluJo SINE Alu 1 299 -13 2021 155 0 3 chr17 20372243 20372553 -69132000 + AluSx SINE Alu 2 310 -2 1703 163 0 41 chr17 20372681 20372975 -69131578 + AluSx SINE Alu 1 282 -30 222 328 144 8 chr17 20373481 20373606 -69130947 + MIR SINE MIR 86 227 -35 819 296 96 42 chr17 20373867 20374018 -69130535 - L2 LINE L2 0 3272 3131 1639 197 17 3 chr17 20374018 20374313 -69130240 - AluJo SINE Alu -9 303 5 819 296 96 42 chr17 20374313 20374654 -69129899 - L2 LINE L2 -141 3131 2776 244 260 27 0 chr17 20374665 20374738 -69129815 - MIR SINE MIR -12 250 176 544 239 142 13 chr17 20374861 20375016 -69129537 - MIR SINE MIR -75 187 13 189 128 21 43 chr17 20376868 20376915 -69127638 + L2 LINE L2 3016 3061 -211 204 171 0 0 chr17 20376994 20377029 -69127524 + L2 LINE L2 3254 3288 -25 1774 147 33 13 chr17 20378393 20378699 -69125854 + AluJo SINE Alu 1 312 0 192 267 100 40 chr17 20380189 20380339 -69124214 + L2 LINE L2 2922 3080 -192 2264 85 20 0 chr17 20382729 20383024 -69121529 - AluSg SINE Alu -9 301 1 183 42 0 0 chr17 20383646 20383670 -69120883 + (AGGTG)n Simple_repeat Simple_repeat 4 27 0 235 305 211 0 chr17 20384175 20384270 -69120283 - L3 LINE CR1 -32 1545 1431 573 265 19 49 chr17 20385970 20386172 -69118381 - MIR SINE MIR -25 237 41 333 306 77 15 chr17 20387631 20387790 -69116763 + MIR SINE MIR 31 196 -63 312 314 58 22 chr17 20388564 20388701 -69115852 + L2 LINE L2 2572 2713 -601 4197 181 113 2 chr17 20388701 20389663 -69114890 + L1MC3 LINE L1 6711 7779 -6 2262 90 0 19 chr17 20389664 20389976 -69114577 + AluSq SINE Alu 1 306 -7 1665 104 13 0 chr17 20390051 20390281 -69114272 + AluSq SINE Alu 2 234 -79 2501 70 3 0 chr17 20390359 20390671 -69113882 - AluSp SINE Alu 0 313 1 826 262 182 31 chr17 20390675 20391178 -69113375 + L2 LINE L2 2737 3313 0 186 361 25 58 chr17 20391683 20391746 -69112807 + L2 LINE L2 2724 2788 -526 2264 91 7 0 chr17 20391746 20392043 -69112510 + AluSp SINE Alu 1 299 -14 186 361 25 58 chr17 20392043 20392082 -69112471 + L2 LINE L2 2788 2827 -487 2635 242 67 27 chr17 20392082 20392833 -69111720 + MER20B DNA MER1_type 1 781 -3 186 361 25 58 chr17 20392833 20392897 -69111656 + L2 LINE L2 2827 2883 -431 1312 184 88 32 chr17 20392897 20393180 -69111373 - AluJo SINE Alu -13 299 1 186 361 25 58 chr17 20393180 20393252 -69111301 + L2 LINE L2 2883 2956 -358 2314 109 0 0 chr17 20593290 20593593 -68910960 + AluSx SINE Alu 1 303 -9 866 170 0 0 chr17 20594162 20594297 -68910256 - AluJo SINE Alu -177 135 1 231 36 0 0 chr17 20594770 20594798 -68909755 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1218 123 28 6 chr17 20594800 20594979 -68909574 - AluJo SINE Alu -30 282 100 2949 134 126 21 chr17 20595161 20595522 -68909031 + MER1A DNA MER1_type 1 425 -2275 2427 74 6 10 chr17 20595522 20595834 -68908719 + AluY SINE Alu 1 311 0 2949 134 126 21 chr17 20595834 20595948 -68908605 + MER1A DNA MER1_type 425 526 -1 1747 144 0 91 chr17 20595994 20596314 -68908239 - AluJb SINE Alu -21 291 1 1801 176 10 3 chr17 20596870 20597172 -68907381 + AluJo SINE Alu 1 304 -8 2482 67 0 13 chr17 20597187 20597502 -68907051 - AluY SINE Alu 0 311 1 30 45 0 0 chr17 20597795 20597839 -68906714 + AT_rich Low_complexity Low_complexity 1 44 0 37 0 0 0 chr17 20598404 20598441 -68906112 + AT_rich Low_complexity Low_complexity 1 37 0 2465 97 21 97 chr17 20599140 20599294 -68905259 + L1MB1 LINE L1 5451 5615 -553 2465 150 11 56 chr17 20599294 20599760 -68904793 + L1MB1 LINE L1 5721 6167 -1 2465 97 21 97 chr17 20599760 20599776 -68904777 + L1MB1 LINE L1 5615 6167 -1 1286 150 68 18 chr17 20599776 20599996 -68904557 + AluJb SINE Alu 68 298 -14 324 343 217 10 chr17 20600426 20600733 -68903820 - L2 LINE L2 -562 2752 2346 2388 197 100 28 chr17 20600733 20601262 -68903291 - MLT1F1 LTR MaLR 0 567 1 324 343 217 10 chr17 20601262 20601345 -68903208 - L2 LINE L2 -968 2346 2281 613 292 43 36 chr17 20602574 20602821 -68901732 - MIR SINE MIR -13 249 3 465 249 202 0 chr17 20602883 20603056 -68901497 + L2 LINE L2 3106 3313 0 2048 124 7 0 chr17 20603187 20603614 -68900939 + AluSq SINE Alu 1 429 0 356 281 119 73 chr17 20604180 20604424 -68900129 + L1MC/D LINE L1 4730 4961 -1185 633 121 0 10 chr17 20604424 20604523 -68900030 - L1PA5 LINE L1 0 6154 6057 356 281 119 73 chr17 20604523 20604545 -68900008 + L1MC/D LINE L1 4961 4981 -1165 2212 97 23 7 chr17 20604545 20604853 -68899700 + AluSp SINE Alu 1 313 0 356 281 119 73 chr17 20604853 20604970 -68899583 + L1MC/D LINE L1 4981 5132 -1014 925 244 47 73 chr17 20605084 20605236 -68899317 + L1MC/D LINE L1 5255 5410 -2398 565 170 198 0 chr17 20605236 20605342 -68899211 - FLAM_A SINE Alu -6 127 1 925 244 47 73 chr17 20605342 20605598 -68898955 + L1MC/D LINE L1 5410 5652 -2156 1883 133 53 0 chr17 20605752 20606037 -68898516 - AluJo SINE Alu -12 300 1 2524 64 0 0 chr17 20606229 20606525 -68898028 + AluY SINE Alu 1 296 -15 438 305 112 34 chr17 20606763 20606807 -68897746 + HAL1b LINE L1 68 107 -1241 2068 72 0 0 chr17 20606807 20607056 -68897497 + AluY SINE Alu 43 291 -20 438 305 112 34 chr17 20607056 20607483 -68897070 + HAL1b LINE L1 107 576 -772 893 294 180 20 chr17 20607612 20608247 -68896306 + L2 LINE L2 2574 3312 -1 30 45 0 0 chr17 20608363 20608407 -68896146 + AT_rich Low_complexity Low_complexity 1 44 0 714 187 8 8 chr17 20608417 20608540 -68896013 + FLAM_A SINE Alu 1 123 -10 461 261 118 17 chr17 20609170 20609437 -68895116 + L1MB8 LINE L1 5576 5881 -303 225 360 80 8 chr17 20610623 20610748 -68893805 - L2 LINE L2 -14 3258 3125 1390 278 88 8 chr17 20610897 20611394 -68893159 + L1MC4 LINE L1 6784 7320 -722 330 353 72 7 chr17 20611430 20611583 -68892970 + L1MC4 LINE L1 7402 7564 -478 9186 180 98 73 chr17 20611640 20612737 -68891816 + L1MDa LINE L1 1 1070 -5651 2338 76 13 7 chr17 20612737 20613041 -68891512 + AluY SINE Alu 1 306 -5 9186 180 98 73 chr17 20613041 20613119 -68891434 + L1MDa LINE L1 1070 1145 -5576 2256 77 3 27 chr17 20613119 20613416 -68891137 + AluSp SINE Alu 1 290 -23 9186 180 98 73 chr17 20613416 20614805 -68889748 + L1MDa LINE L1 1145 2684 -4037 1872 140 17 20 chr17 20614805 20615105 -68889448 + AluSx SINE Alu 1 299 -13 9186 180 98 73 chr17 20615105 20615257 -68889296 + L1MDa LINE L1 2684 2831 -3890 912 220 41 8 chr17 20615267 20615512 -68889041 + L1MDa LINE L1 2897 3149 -3391 864 195 29 75 chr17 20615492 20615733 -68888820 + L1MB8 LINE L1 5949 6178 0 * 1725 230 99 48 chr17 20615733 20615962 -68888591 + L1MDa LINE L1 3143 3359 -3181 2069 104 20 7 chr17 20615962 20616261 -68888292 + AluSg SINE Alu 1 303 -7 1725 230 99 48 chr17 20616261 20616741 -68887812 + L1MDa LINE L1 3359 3888 -2652 639 232 0 7 chr17 20616930 20617068 -68887485 + L1MDa LINE L1 3898 4034 -2506 365 239 23 0 chr17 20617068 20617156 -68887397 + MER66B LTR ERV1 256 345 -141 1153 111 7 0 chr17 20617211 20617364 -68887189 + AluSq SINE Alu 1 154 -159 2284 198 37 36 chr17 20617384 20617946 -68886607 + L1MDa LINE L1 4078 4640 -1900 1429 143 136 0 chr17 20617948 20618221 -68886332 + L1MA8 LINE L1 5978 6287 -4 1902 150 17 0 chr17 20618232 20618526 -68886027 + AluSx SINE Alu 1 299 -13 1912 101 76 4 chr17 20618551 20618828 -68885725 + AluSg SINE Alu 1 297 -13 266 192 13 90 chr17 20618840 20618918 -68885635 + L1MDa LINE L1 4650 4721 -1819 751 172 0 25 chr17 20618929 20619051 -68885502 + FAM SINE Alu 54 172 -13 2456 239 49 12 chr17 20619051 20619757 -68884796 + L1MDa LINE L1 4719 5456 -1084 2321 109 3 0 chr17 20619757 20620069 -68884484 + AluSp SINE Alu 1 313 0 2456 239 49 12 chr17 20620069 20620118 -68884435 + L1MDa LINE L1 5456 5502 -1038 299 119 0 0 chr17 20620131 20620173 -68884380 + Alu SINE Alu 1 42 -260 395 182 26 0 chr17 20620177 20620254 -68884299 + L1MC4 LINE L1 7964 8042 0 2321 95 0 7 chr17 20620265 20620569 -68883984 + AluSg SINE Alu 1 302 -8 1229 231 148 37 chr17 20620571 20620830 -68883723 + L1MB3 LINE L1 371 693 -5591 2571 137 43 28 chr17 20620830 20621252 -68883301 + MSTB1 LTR MaLR 5 432 0 1229 231 148 37 chr17 20621252 20621398 -68883155 + L1MB3 LINE L1 693 821 -5463 2272 98 7 0 chr17 20621398 20621693 -68882860 + AluSq SINE Alu 1 297 -16 216 97 0 0 chr17 20621707 20621738 -68882815 + (TG)n Simple_repeat Simple_repeat 2 32 0 213 196 0 0 chr17 20621737 20621783 -68882770 + (CATA)n Simple_repeat Simple_repeat 3 48 0 * 3047 204 27 39 chr17 20621783 20623135 -68881418 + L1MB3 LINE L1 804 2172 -4247 1661 80 0 9 chr17 20623135 20623347 -68881206 + AluSq SINE Alu 96 305 -8 3047 204 27 39 chr17 20623347 20623362 -68881191 + L1MB3 LINE L1 2172 6383 -36 2137 137 3 0 chr17 20623368 20623674 -68880879 + AluSx SINE Alu 1 307 -5 235 65 109 0 chr17 20623779 20623825 -68880728 + L1MB4 LINE L1 6129 6179 -1 387 278 104 26 chr17 20623840 20624120 -68880433 + L1M4b LINE L1 1645 2092 -4471 22 0 0 0 chr17 20624222 20624244 -68880309 + AT_rich Low_complexity Low_complexity 1 22 0 360 335 78 16 chr17 20624244 20624489 -68880064 + L1M4b LINE L1 2033 2292 -4271 883 264 18 9 chr17 20624491 20624718 -68879835 - MLT1C LTR MaLR 0 467 239 1437 266 52 4 chr17 20624719 20625201 -68879352 + L1M4b LINE L1 3344 3848 -2534 * 2391 223 27 30 chr17 20625187 20625600 -68878953 + L1M4b LINE L1 4423 4835 -1547 2345 103 3 0 chr17 20625600 20625901 -68878652 + AluSp SINE Alu 1 302 -11 2391 223 27 30 chr17 20625901 20626151 -68878402 + L1M4b LINE L1 4835 5084 -1298 914 168 0 0 chr17 20626166 20626309 -68878244 - FLAM_C SINE Alu 0 143 1 286 244 12 24 chr17 20626333 20626415 -68878138 + L1M4b LINE L1 5127 5207 -1175 242 214 0 0 chr17 20626415 20626457 -68878096 - AluJ/monomer SINE Alu -260 42 1 1245 225 9 9 chr17 20626481 20626796 -68877757 + L1MB7 LINE L1 5127 5441 -941 * 3624 148 71 1 chr17 20626788 20627449 -68877104 + L1MA5 LINE L1 4664 5370 -776 571 139 29 44 chr17 20627446 20627583 -68876970 - L1M4 LINE L1 -1352 4794 4660 * 1754 145 15 5 chr17 20627589 20628469 -68876084 + L1MA5 LINE L1 5366 6295 -5 3951 170 20 14 chr17 20628478 20629287 -68875266 + L1MB7 LINE L1 5424 6234 -186 1106 167 4 108 chr17 20629293 20629533 -68875020 - MLT1B LTR MaLR -3 387 173 657 278 96 32 chr17 20629700 20630143 -68874410 - LTR33A LTR ERVL -9 514 25 316 308 58 41 chr17 20630581 20630753 -68873800 - L1M4 LINE L1 -2309 3837 3663 372 277 97 75 chr17 20631042 20631320 -68873233 + L2 LINE L2 2973 3256 -16 621 226 15 8 chr17 20631445 20631578 -68872975 + MER58B DNA MER1_type 207 340 -1 377 172 0 0 chr17 20632036 20632100 -68872453 - Charlie8 DNA MER1_type -2272 145 82 252 235 25 42 chr17 20632290 20632409 -68872144 + L1P4 LINE L1 5315 5431 -735 2296 87 0 0 chr17 20632422 20632740 -68871813 + AluY SINE Alu 2 319 0 1044 84 0 0 chr17 20632826 20632957 -68871596 + AluSc SINE Alu 1 131 -178 267 0 70 0 chr17 20632958 20633001 -68871552 + (TA)n Simple_repeat Simple_repeat 2 47 0 504 316 76 8 chr17 20633011 20633261 -68871292 + L1MC4a LINE L1 5521 5787 -375 2581 137 45 33 chr17 20633385 20633810 -68870743 + Tigger2a DNA MER2_type 5 434 0 2188 119 7 0 chr17 20634030 20634332 -68870221 + AluSg SINE Alu 1 304 -6 289 81 0 0 chr17 20635352 20635389 -68869164 + MER68 LTR ERV1 3 39 -523 519 17 0 0 chr17 20635394 20635454 -68869099 + (TAAA)n Simple_repeat Simple_repeat 2 61 0 661 223 9 0 chr17 20635454 20635566 -68868987 - FLAM_C SINE Alu -29 114 2 2897 156 51 18 chr17 20635569 20636083 -68868470 + MER68 LTR ERV1 32 562 0 801 223 0 0 chr17 20636108 20636265 -68868288 + FRAM SINE Alu 2 158 -18 284 297 41 32 chr17 20636876 20637095 -68867458 + L1MC4a LINE L1 5841 6061 -1747 4021 127 83 40 chr17 20637103 20638370 -68866183 - LTR12 LTR ERV1 0 1521 6 2255 85 3 26 chr17 20638426 20638732 -68865821 - AluY SINE Alu -12 299 1 2395 77 0 0 chr17 20638778 20639077 -68865476 + AluY SINE Alu 1 299 -12 530 191 48 40 chr17 20639257 20639383 -68865170 + FRAM SINE Alu 50 176 0 652 260 113 71 chr17 20639438 20639609 -68864944 + HAL1 LINE L1 1217 1379 -1128 2131 118 10 3 chr17 20639609 20639897 -68864656 + AluSx SINE Alu 3 292 -20 652 260 113 71 chr17 20639897 20640160 -68864393 + HAL1 LINE L1 1379 1669 -838 1406 231 78 5 chr17 20640460 20640858 -68863695 + L1ME3A LINE L1 5401 5827 -343 1923 166 0 3 chr17 20640859 20641167 -68863386 + AluSx SINE Alu 1 307 -5 252 257 88 59 chr17 20641167 20641251 -68863302 + L1MDa LINE L1 2500 2580 -3960 3756 156 46 46 chr17 20641251 20641965 -68862588 + L1MB2 LINE L1 5450 6163 -8 252 257 88 59 chr17 20641965 20642427 -68862126 + L1MDa LINE L1 2580 3064 -3476 24 32 0 0 chr17 20642553 20642584 -68861969 + AT_rich Low_complexity Low_complexity 1 31 0 347 283 116 17 chr17 20642621 20642794 -68861759 + L1MEc LINE L1 1624 1813 -4583 420 289 118 53 chr17 20642940 20643839 -68860714 + L1MEc LINE L1 3114 4070 -2145 23 33 0 0 chr17 20645197 20645227 -68859326 + GC_rich Low_complexity Low_complexity 1 30 0 714 181 32 64 chr17 20645559 20645747 -68858806 + MER5A DNA MER1_type 5 186 -3 687 180 41 67 chr17 20646164 20646358 -68858195 + MER20 DNA MER1_type 2 190 -29 276 297 27 27 chr17 20646621 20646769 -68857784 - L1MEc LINE L1 -2365 3850 3703 573 132 19 28 chr17 20646771 20646877 -68857676 + FLAM_C SINE Alu 38 142 -1 437 296 90 86 chr17 20646877 20647356 -68857197 - L1MEc LINE L1 -2518 3697 3237 232 189 14 81 chr17 20647510 20647584 -68856969 - L1MEc LINE L1 -3879 2517 2449 821 263 82 68 chr17 20648135 20648339 -68856214 - HAL1b LINE L1 -536 812 612 1682 166 0 7 chr17 20648339 20648623 -68855930 + AluJo SINE Alu 1 282 -30 821 263 82 68 chr17 20648623 20648842 -68855711 - HAL1b LINE L1 -736 612 377 2302 88 0 0 chr17 20648842 20649148 -68855405 + AluY SINE Alu 1 306 -5 821 263 82 68 chr17 20649148 20649283 -68855270 - HAL1b LINE L1 -971 377 245 1905 96 100 0 chr17 20649284 20649555 -68854998 - AluSx SINE Alu -14 298 1 2228 102 7 0 chr17 20649769 20650074 -68854479 - AluSx SINE Alu -4 308 2 252 0 0 0 chr17 20650215 20650243 -68854310 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1006 84 0 28 chr17 20650247 20650390 -68854163 - AluSg/x SINE Alu -27 285 147 1797 162 3 0 chr17 20650390 20650686 -68853867 - AluJo SINE Alu -15 297 1 372 287 23 8 chr17 20650715 20650844 -68853709 + MER94 DNA DNA 4 134 0 2093 114 0 7 chr17 20651238 20651546 -68853007 - AluSg SINE Alu -4 306 1 300 310 0 11 chr17 20651660 20651747 -68852806 + L1M4 LINE L1 2742 2827 -3319 2066 99 7 3 chr17 20651815 20652099 -68852454 + AluSg SINE Alu 9 293 -17 2020 122 0 0 chr17 20652129 20652416 -68852137 - AluSx SINE Alu -21 291 5 798 126 0 70 chr17 20652441 20652584 -68851969 + FLAM_C SINE Alu 1 133 0 2180 99 0 13 chr17 20652705 20652839 -68851714 + AluY SINE Alu 1 135 -176 2155 81 3 36 chr17 20652839 20653147 -68851406 + AluSq SINE Alu 1 298 -15 2180 99 0 13 chr17 20653147 20653326 -68851227 + AluY SINE Alu 135 310 -1 2158 109 0 0 chr17 20653425 20653727 -68850826 - AluSx SINE Alu -10 302 1 4528 253 116 35 chr17 20653789 20654589 -68849964 + L2 LINE L2 1152 1885 -1428 1817 142 17 0 chr17 20654589 20654878 -68849675 + AluJb SINE Alu 1 294 -18 4528 253 116 35 chr17 20654878 20655005 -68849548 + L2 LINE L2 1885 2000 -1313 2052 113 7 0 chr17 20655005 20655298 -68849255 - AluSg SINE Alu -15 295 1 4528 253 116 35 chr17 20655298 20655402 -68849151 + L2 LINE L2 2000 2094 -1219 2291 77 0 3 chr17 20655402 20655701 -68848852 - AluY SINE Alu -13 298 1 4528 253 116 35 chr17 20655701 20656443 -68848110 + L2 LINE L2 2094 3104 -209 2174 108 0 7 chr17 20656443 20656750 -68847803 + AluSx SINE Alu 1 305 -7 4528 253 116 35 chr17 20656750 20656881 -68847672 + L2 LINE L2 3104 3223 -90 619 108 0 0 chr17 20656885 20656968 -68847585 - 5S rRNA rRNA -32 89 7 370 148 8 205 chr17 20656968 20657090 -68847463 + L2 LINE L2 3214 3311 -2 273 285 89 76 chr17 20657100 20657250 -68847303 + L1M4 LINE L1 3802 3948 -2198 2141 107 0 0 chr17 20657250 20657541 -68847012 + AluSx SINE Alu 1 291 -21 273 285 89 76 chr17 20657541 20657681 -68846872 + L1M4 LINE L1 3948 4096 -2050 35 54 0 0 chr17 20658194 20658250 -68846303 + AT_rich Low_complexity Low_complexity 1 56 0 2449 150 70 0 chr17 20658279 20658679 -68845874 + MSTC LTR MaLR 1 428 0 331 136 0 159 chr17 20658710 20658745 -68845808 + LTR67 LTR ERVL 484 498 -59 2304 65 0 14 chr17 20658745 20659039 -68845514 + AluY SINE Alu 1 290 -21 331 136 0 159 chr17 20659039 20659091 -68845462 + LTR67 LTR ERVL 498 557 0 2332 78 0 3 chr17 20659234 20659540 -68845013 + AluSq SINE Alu 1 305 -8 2336 85 0 0 chr17 20659549 20659856 -68844697 + AluSg SINE Alu 1 307 -3 2477 81 4 1 chr17 20660121 20661179 -68843374 + AluY SINE Alu 1 305 -6 1723 127 14 0 chr17 20661222 20661524 -68843029 - AluJo SINE Alu 0 311 6 572 167 127 7 chr17 20661535 20661685 -68842868 - FAM SINE Alu -12 173 6 642 133 0 0 chr17 20661762 20661867 -68842686 + AluSg/x SINE Alu 206 310 0 814 184 11 35 chr17 20661867 20662041 -68842512 + L1MB2 LINE L1 5658 5827 -344 2048 133 0 0 chr17 20662041 20662342 -68842211 + AluSx SINE Alu 1 301 -11 995 207 91 11 chr17 20662342 20662617 -68841936 + LTR65 LTR ERV1 366 662 -7 955 254 9 18 chr17 20663423 20663640 -68840913 - MER58A DNA MER1_type -9 215 1 437 272 133 15 chr17 20663652 20663774 -68840779 + MIR SINE MIR 39 145 -117 1899 116 3 3 chr17 20663774 20664058 -68840495 + AluSx SINE Alu 16 299 -13 437 272 133 15 chr17 20664058 20664130 -68840423 + MIR SINE MIR 145 256 -6 238 269 75 21 chr17 20664185 20664278 -68840275 - L2 LINE L2 -218 3054 2957 2044 92 21 7 chr17 20664294 20664575 -68839978 - AluSx SINE Alu -27 285 1 598 251 37 60 chr17 20664585 20664800 -68839753 + MIR SINE MIR 53 262 0 372 258 11 0 chr17 20665192 20665262 -68839291 + MIR3 SINE MIR 117 190 -18 2082 121 14 0 chr17 20665262 20665559 -68838994 - AluSx SINE Alu -11 301 1 372 258 11 0 chr17 20665559 20665577 -68838976 + MIR3 SINE MIR 190 206 -2 586 111 0 0 chr17 20665827 20665908 -68838645 + AluSg SINE Alu 2 82 -228 3524 143 76 7 chr17 20666810 20667404 -68837149 - MER41B LTR ERV1 0 635 1 635 190 141 0 chr17 20667547 20667710 -68836843 + LTR10D LTR ERV1 1 186 -327 2419 62 0 3 chr17 20667718 20668023 -68836530 + AluY SINE Alu 1 304 -7 1254 99 0 0 chr17 20668023 20668194 -68836359 + AluSc SINE Alu 133 303 -6 436 186 9 69 chr17 20668273 20668385 -68836168 - MER33 DNA MER1_type -259 65 1 2007 84 20 37 chr17 20668402 20668700 -68835853 + AluSx SINE Alu 6 298 -14 2210 92 0 0 chr17 20668705 20669000 -68835553 + AluSx SINE Alu 5 299 -13 645 290 47 0 chr17 20669012 20669181 -68835372 + HERV16 LTR ERVL 2693 2869 -2127 1911 210 94 74 chr17 20669213 20669628 -68834925 + MER77 LTR ERV1 41 447 -158 1923 111 11 4 chr17 20669628 20669908 -68834645 - AluY SINE Alu -29 282 1 1911 210 94 74 chr17 20669908 20670067 -68834486 + MER77 LTR ERV1 447 601 -4 27 0 0 0 chr17 20670279 20670306 -68834247 + AT_rich Low_complexity Low_complexity 1 27 0 1697 63 0 5 chr17 20670309 20670531 -68834022 - L1MA1 LINE L1 -5 6297 6077 1979 127 0 10 chr17 20670534 20670833 -68833720 - AluSx SINE Alu -16 296 1 287 196 98 18 chr17 20670844 20670871 -68833682 - L1MEc LINE L1 -4689 1707 1684 2087 113 0 10 chr17 20670871 20671173 -68833380 - AluSq SINE Alu -14 299 1 287 196 98 18 chr17 20671173 20671257 -68833296 - L1MEc LINE L1 -4712 1684 1587 1440 188 0 4 chr17 20671257 20671536 -68833017 - AluJb SINE Alu 0 307 30 349 291 26 56 chr17 20671550 20671641 -68832912 - L1MEc LINE L1 -4807 1589 1497 2405 53 0 3 chr17 20671641 20671943 -68832610 - AluY SINE Alu -10 301 1 1779 114 96 0 chr17 20671945 20672216 -68832337 - AluSx SINE Alu -15 297 1 349 291 26 56 chr17 20672216 20672461 -68832092 - L1MEc LINE L1 -4900 1496 1260 1835 126 39 18 chr17 20672493 20672779 -68831774 + AluSx SINE Alu 1 292 -20 2316 80 3 0 chr17 20672953 20673255 -68831298 + AluSq SINE Alu 1 303 -10 526 271 42 92 chr17 20673679 20673941 -68830612 + MIR SINE MIR 13 261 -1 272 295 241 6 chr17 20674677 20674843 -68829710 + MIR SINE MIR 53 257 -5 1933 100 38 0 chr17 20674894 20675183 -68829370 - AluSx SINE Alu -12 300 1 3447 89 126 18 chr17 20675310 20675881 -68828672 + LTR10E LTR ERV1 1 633 0 186 263 105 0 chr17 20675883 20675940 -68828613 + MIR SINE MIR 82 144 -64 2262 55 10 0 chr17 20677845 20678134 -68826419 + AluSp SINE Alu 1 292 -21 2015 98 20 20 chr17 20678152 20678457 -68826096 - AluSq SINE Alu -8 305 1 225 287 233 13 chr17 20678471 20678621 -68825932 + MIR3 SINE MIR 20 202 -6 696 270 155 60 chr17 20678861 20679344 -68825209 - L2 LINE L2 -5 3308 2872 1481 202 27 0 chr17 20679344 20679636 -68824917 + AluJo SINE Alu 2 301 -11 696 270 155 60 chr17 20679636 20679697 -68824856 - L2 LINE L2 -441 2872 2818 1235 163 139 4 chr17 20679697 20679955 -68824598 + AluJo SINE Alu 5 297 -15 696 270 155 60 chr17 20679955 20680020 -68824533 - L2 LINE L2 -495 2818 2627 963 257 59 64 chr17 20680031 20680153 -68824400 + L2 LINE L2 2202 2323 -991 1295 72 169 0 chr17 20680153 20680348 -68824205 + MER30 DNA MER1_type 2 229 -1 963 257 59 64 chr17 20680348 20680449 -68824104 + L2 LINE L2 2323 2423 -891 2005 100 45 0 chr17 20680449 20680740 -68823813 - AluSq SINE Alu -9 304 1 963 257 59 64 chr17 20680740 20680919 -68823634 + L2 LINE L2 2423 2603 -711 196 359 39 10 chr17 20680920 20681023 -68823530 - L2 LINE L2 -245 3068 2963 971 157 65 109 chr17 20681230 20681412 -68823141 - MER58A DNA MER1_type -2200 220 49 1645 142 38 0 chr17 20681412 20681673 -68822880 + AluSx SINE Alu 31 301 -11 971 157 65 109 chr17 20681673 20681720 -68822833 - MER58A DNA MER1_type -2371 49 1 2317 57 0 0 chr17 20681908 20682215 -68822338 + AluY SINE Alu 2 308 0 565 271 164 14 chr17 20682306 20682540 -68822013 + L1ME LINE L1 5312 5510 -660 1887 111 56 0 chr17 20682540 20682828 -68821725 - AluSx SINE Alu -8 304 1 565 271 164 14 chr17 20682828 20683013 -68821540 + L1ME LINE L1 5510 5794 -376 2158 111 0 0 chr17 20683137 20683435 -68821118 - AluSx SINE Alu -14 298 1 1245 156 204 0 chr17 20683511 20683761 -68820792 + AluJo SINE Alu 1 301 -1 2088 135 0 0 chr17 20683810 20684121 -68820432 - AluSx SINE Alu -1 311 1 853 277 127 17 chr17 20684319 20684730 -68819823 - L2 LINE L2 -749 2565 2110 307 272 161 12 chr17 20684807 20684969 -68819584 + L2 LINE L2 3118 3303 -10 2100 99 3 7 chr17 20685297 20685600 -68818953 - AluSx SINE Alu -10 302 1 769 287 36 9 chr17 20685749 20685972 -68818581 - MIR SINE MIR 0 262 34 221 238 0 0 chr17 20686012 20686054 -68818499 + L2 LINE L2 3017 3058 -255 2348 72 0 3 chr17 20686439 20686743 -68817810 - AluY SINE Alu -8 303 1 2179 107 3 0 chr17 20686753 20687061 -68817492 - AluSq SINE Alu -4 309 1 23 33 0 0 chr17 20687331 20687361 -68817192 + AT_rich Low_complexity Low_complexity 1 30 0 449 258 86 25 chr17 20687860 20688023 -68816530 + MIR3 SINE MIR 35 207 -1 361 364 25 0 chr17 20688179 20688297 -68816256 - L2 LINE L2 -18 3254 3134 329 372 18 6 chr17 20688315 20688479 -68816074 - L2 LINE L2 -720 2594 2429 432 277 52 105 chr17 20688628 20688868 -68815685 + MIR SINE MIR 37 262 0 2061 109 0 16 chr17 20689740 20690052 -68814501 - AluSg SINE Alu -3 307 1 2166 120 0 3 chr17 20690740 20691049 -68813504 - AluSq SINE Alu -5 308 1 1165 125 0 0 chr17 20691282 20691450 -68813103 + AluSg/x SINE Alu 135 302 -8 335 288 124 20 chr17 20692018 20692329 -68812224 + L1ME4a LINE L1 5335 5673 -586 390 129 0 0 chr17 20692330 20692392 -68812161 + (TG)n Simple_repeat Simple_repeat 2 63 0 346 303 70 35 chr17 20692392 20692521 -68812032 + L1ME4a LINE L1 5681 5823 -298 1740 184 0 0 chr17 20692521 20692826 -68811727 - AluJo SINE Alu -5 307 3 346 303 70 35 chr17 20692826 20692924 -68811629 + L1ME4a LINE L1 5823 5916 -205 3320 168 91 15 chr17 20693217 20693281 -68811272 + L1MD2 LINE L1 5519 5577 -782 1911 128 9 40 chr17 20693281 20693602 -68810951 - AluJb SINE Alu -1 311 1 1806 114 40 4 chr17 20693608 20693918 -68810635 - AluSq SINE Alu 0 320 1 3320 168 91 15 chr17 20693918 20694571 -68809982 + L1MD2 LINE L1 5581 6299 -60 855 135 8 0 chr17 20694571 20694697 -68809856 - AluJb SINE Alu -185 127 1 281 162 73 0 chr17 20694697 20694765 -68809788 + L1MD2 LINE L1 6287 6359 0 26 64 0 0 chr17 20695027 20695074 -68809479 + AT_rich Low_complexity Low_complexity 1 47 0 612 285 97 31 chr17 20695129 20695448 -68809105 - L1ME LINE L1 -404 5717 5378 2227 105 10 13 chr17 20695509 20695822 -68808731 + AluSq SINE Alu 1 312 -1 29 0 0 0 chr17 20696990 20697019 -68807534 + AT_rich Low_complexity Low_complexity 1 29 0 303 274 25 83 chr17 20697041 20697116 -68807437 - MIR SINE MIR -45 217 154 2336 56 25 3 chr17 20697116 20697400 -68807153 - AluY SINE Alu -19 292 3 303 274 25 83 chr17 20697400 20697481 -68807072 - MIR SINE MIR -108 154 70 225 94 0 0 chr17 20697721 20697753 -68806800 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 1397 104 6 0 chr17 20697756 20697938 -68806615 - AluSq SINE Alu -129 184 2 741 189 0 15 chr17 20697970 20698102 -68806451 + FLAM_A SINE Alu 1 130 -3 307 314 69 32 chr17 20698131 20698478 -68806075 - L1MEd LINE L1 -5219 900 541 489 264 44 13 chr17 20698509 20698668 -68805885 + MER46C DNA MER2_type 163 326 -12 2056 109 0 0 chr17 20698817 20699082 -68805471 - AluSg SINE Alu -20 290 26 327 247 118 17 chr17 20699222 20699410 -68805143 - L1ME1 LINE L1 -32 6412 6198 2354 100 0 7 chr17 20699410 20699720 -68804833 - AluSx SINE Alu 0 312 5 327 247 118 17 chr17 20699720 20699733 -68804820 - L1ME1 LINE L1 -246 6198 6188 1402 213 67 53 chr17 20699735 20699869 -68804684 - L1ME1 LINE L1 -984 5422 5291 2333 88 0 30 chr17 20699869 20700174 -68804379 + AluY SINE Alu 1 296 -15 1402 213 67 53 chr17 20700174 20700475 -68804078 - L1ME1 LINE L1 -1115 5291 4981 * 3722 222 78 44 chr17 20700468 20700612 -68803941 - L1ME1 LINE L1 -2492 3914 3776 2059 147 0 3 chr17 20700612 20700911 -68803642 - AluSx SINE Alu -13 299 2 3722 222 78 44 chr17 20700911 20702156 -68802397 - L1ME1 LINE L1 -2630 3776 2519 2066 117 3 3 chr17 20702156 20702480 -68802073 - AluSq SINE Alu 0 324 1 3722 222 78 44 chr17 20702480 20702573 -68801980 - L1ME1 LINE L1 -3887 2519 2431 21 57 0 0 chr17 20702609 20702644 -68801909 + AT_rich Low_complexity Low_complexity 1 35 0 417 218 38 97 chr17 20702654 20702749 -68801804 - L1ME1 LINE L1 -4007 2399 2300 9198 48 11 165 chr17 20702749 20704363 -68800190 - SVA Other Other -2 1384 19 417 218 38 97 chr17 20704363 20704406 -68800147 - L1ME1 LINE L1 -4106 2300 2256 194 61 0 30 chr17 20704406 20704439 -68800114 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1497 104 5 10 chr17 20704440 20704641 -68799912 - AluSx SINE Alu -112 200 1 417 218 38 97 chr17 20704641 20704788 -68799765 - L1ME1 LINE L1 -4149 2257 2128 2362 81 7 7 chr17 20704865 20705172 -68799381 - AluSc SINE Alu -2 307 1 1285 264 77 39 chr17 20705175 20705799 -68798754 - L1ME1 LINE L1 -4988 1421 804 272 28 0 0 chr17 20706661 20706697 -68797856 - AluY SINE Alu -5 296 261 * 1937 117 24 0 chr17 20706695 20706986 -68797567 - HSMAR2 DNA Mariner -1001 301 4 189 0 0 0 chr17 20707983 20708004 -68796549 + (A)n Simple_repeat Simple_repeat 1 21 0 812 270 108 0 chr17 20708080 20708302 -68796251 - MIR SINE MIR -11 251 6 216 0 0 0 chr17 20708362 20708386 -68796167 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr17 20708385 20708407 -68796146 + (TA)n Simple_repeat Simple_repeat 2 23 0 * 309 219 10 62 chr17 20708407 20708503 -68796050 + L1MC4 LINE L1 6614 6704 -1338 320 197 122 48 chr17 20708551 20708698 -68795855 - MER112 DNA MER1_type -97 163 6 252 259 35 0 chr17 20709577 20709635 -68794918 + MIR SINE MIR 75 134 -74 404 196 9 37 chr17 20709875 20709982 -68794571 - L2 LINE L2 -758 2556 2453 1964 83 11 23 chr17 20709985 20710274 -68794279 - AluSc SINE Alu 0 304 19 969 239 97 10 chr17 20710341 20710650 -68793903 - L2 LINE L2 -1648 1666 1331 4614 161 28 28 chr17 20710698 20711473 -68793080 - MER21B LTR ERV1 -49 814 37 1674 170 41 0 chr17 20711473 20711767 -68792786 + AluJo SINE Alu 1 306 -6 4614 161 28 28 chr17 20711767 20711805 -68792748 - MER21B LTR ERV1 -825 38 1 425 272 103 0 chr17 20711813 20711949 -68792604 - L2 LINE L2 -2001 1313 1164 520 308 121 21 chr17 20712031 20712404 -68792149 - L1ME LINE L1 -407 5714 5305 209 267 279 0 chr17 20714970 20715056 -68789497 - L2 LINE L2 -8 3264 3155 1891 131 16 20 chr17 20715630 20715935 -68788618 + AluJb SINE Alu 1 304 -8 184 235 24 129 chr17 20716039 20716124 -68788429 + MER5A DNA MER1_type 1 76 -113 2266 110 0 0 chr17 20716125 20716424 -68788129 + AluSx SINE Alu 1 299 -13 1553 108 0 9 chr17 20716444 20716656 -68787897 + AluSq SINE Alu 10 219 -94 314 328 8 33 chr17 20716678 20716800 -68787753 - MER5A DNA MER1_type -50 139 21 * 562 283 45 7 chr17 20716772 20716939 -68787614 - MIR3 SINE MIR -39 169 18 2441 99 0 0 chr17 20717130 20717442 -68787111 - AluSx SINE Alu 0 312 1 380 194 83 0 chr17 20718533 20718605 -68785948 + Tigger3b DNA MER2_type 1 78 -1153 227 295 0 0 chr17 20718621 20718716 -68785837 + A-rich Low_complexity Low_complexity 1 95 0 245 143 0 0 chr17 20718716 20718751 -68785802 + Tigger3b DNA MER2_type 65 99 -1132 5968 84 63 1 chr17 20718753 20719611 -68784942 + Tigger3b DNA MER2_type 275 1185 -46 261 0 0 0 chr17 20719623 20719652 -68784901 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1893 152 4 0 chr17 20719652 20719929 -68784624 - AluSx SINE Alu -32 280 3 472 273 30 30 chr17 20719931 20720096 -68784457 + MIR SINE MIR 98 262 0 1036 156 0 0 chr17 20720141 20720295 -68784258 + AluJb SINE Alu 128 281 -31 2357 84 3 0 chr17 20720441 20720728 -68783825 + AluSp SINE Alu 1 288 -25 24 0 0 0 chr17 20720728 20720752 -68783801 + AT_rich Low_complexity Low_complexity 1 24 0 295 276 204 0 chr17 20721228 20721326 -68783227 - L2 LINE L2 -4 3268 3151 2325 108 0 0 chr17 20721343 20721650 -68782903 + AluSq SINE Alu 1 307 -6 25 31 0 0 chr17 20721787 20721819 -68782734 + AT_rich Low_complexity Low_complexity 1 32 0 290 321 113 12 chr17 20721870 20722038 -68782515 + L1MC/D LINE L1 5508 5692 -2116 2214 112 7 7 chr17 20722190 20722493 -68782060 - AluSx SINE Alu -9 303 1 2298 119 0 0 chr17 20722971 20723282 -68781271 + AluSx SINE Alu 1 311 -1 866 177 186 53 chr17 20723511 20723653 -68780900 - AluJo SINE Alu -13 299 177 2146 104 3 0 chr17 20723653 20723940 -68780613 + AluSg SINE Alu 1 288 -22 866 177 186 53 chr17 20723940 20724023 -68780530 - AluJo SINE Alu -135 177 44 830 129 0 16 chr17 20724026 20724150 -68780403 - FLAM_C SINE Alu -10 133 12 241 297 145 36 chr17 20724246 20724384 -68780169 - MIR SINE MIR -51 211 59 2245 102 0 37 chr17 20724643 20724965 -68779588 - AluSg SINE Alu 0 310 1 986 209 44 29 chr17 20725024 20725297 -68779256 - L1ME3A LINE L1 0 6170 5894 3153 169 100 42 chr17 20725302 20725770 -68778783 - L1MB7 LINE L1 -11 6173 5637 2194 98 24 10 chr17 20725770 20726067 -68778486 - AluSx SINE Alu -11 301 1 3153 169 100 42 chr17 20726067 20726407 -68778146 - L1MB7 LINE L1 -547 5637 5318 2142 123 0 16 chr17 20726408 20726724 -68777829 - AluSx SINE Alu -1 311 1 2298 105 3 0 chr17 20726728 20727033 -68777520 - AluSq SINE Alu -7 306 1 779 142 0 0 chr17 20727038 20727144 -68777409 - FLAM_C SINE Alu -36 107 2 558 182 45 8 chr17 20727145 20727277 -68777276 - L1MB7 LINE L1 -814 5332 5196 1476 202 15 4 chr17 20727301 20727596 -68776957 - AluJb SINE Alu 0 309 12 1461 98 0 10 chr17 20727629 20727823 -68776730 - AluSq SINE Alu -121 192 1 2854 216 93 19 chr17 20727825 20728607 -68775946 - L1MB7 LINE L1 -1584 4562 3723 688 170 0 111 chr17 20728630 20728801 -68775752 - L1M4 LINE L1 -1279 4867 4716 299 177 32 16 chr17 20728803 20728865 -68775688 - L1MB7 LINE L1 -2478 3668 3606 * 521 268 62 64 chr17 20728859 20729166 -68775387 - L1MC4a LINE L1 -407 5777 5598 180 0 0 0 chr17 20729469 20729489 -68775064 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1745 154 0 0 chr17 20729493 20729753 -68774800 - AluSx SINE Alu -25 287 28 638 235 0 0 chr17 20729787 20729906 -68774647 + AluJb SINE Alu 142 260 -52 30 59 0 0 chr17 20730305 20730356 -68774197 + AT_rich Low_complexity Low_complexity 1 51 0 598 204 144 0 chr17 20730381 20730513 -68774040 + MIR SINE MIR 2 152 -110 2389 78 0 3 chr17 20730836 20731131 -68773422 + AluY SINE Alu 1 294 -17 2356 84 3 3 chr17 20731284 20731593 -68772960 + AluSx SINE Alu 1 309 -3 2196 119 0 0 chr17 20731739 20732042 -68772511 - AluY SINE Alu -7 304 2 853 113 65 0 chr17 20732118 20732242 -68772311 + AluSq/x SINE Alu 3 134 -179 523 169 0 0 chr17 20732457 20732534 -68772019 - AluS SINE Alu -235 78 2 26 50 0 0 chr17 20732952 20732992 -68771561 + AT_rich Low_complexity Low_complexity 1 40 0 854 147 0 0 chr17 20732992 20733108 -68771445 - FLAM_C SINE Alu -27 116 1 2213 88 35 0 chr17 20733206 20733490 -68771063 + AluSc SINE Alu 1 294 -15 366 309 50 7 chr17 20733529 20733668 -68770885 - L1MC4a LINE L1 -757 5407 5263 2309 105 0 40 chr17 20733776 20734101 -68770452 - AluSx SINE Alu 0 312 1 256 242 70 39 chr17 20734170 20734298 -68770255 - L1MC4a LINE L1 -1389 4757 4626 34 0 0 22 chr17 20734934 20734953 -68769600 + AT_rich Low_complexity Low_complexity 1 19 -25 2042 156 3 0 chr17 20734953 20735260 -68769293 - AluSx SINE Alu -4 308 1 34 0 0 22 chr17 20735260 20735285 -68769268 + AT_rich Low_complexity Low_complexity 19 44 0 3393 45 2 8 chr17 20735339 20735736 -68768817 + L1PA6 LINE L1 5758 6152 -2 1077 114 67 0 chr17 20736042 20736191 -68768362 + AluSc SINE Alu 1 159 -150 1382 110 57 24 chr17 20736195 20736404 -68768149 - AluSq SINE Alu -97 216 1 2428 91 0 7 chr17 20736414 20736723 -68767830 - AluSg SINE Alu -3 307 1 1408 117 132 49 chr17 20736729 20736995 -68767558 - AluSx SINE Alu -10 302 15 675 270 0 38 chr17 20737027 20737186 -68767367 + AluJb SINE Alu 142 294 -18 2328 96 0 3 chr17 20737367 20737679 -68766874 - AluY SINE Alu 0 311 1 2289 84 0 7 chr17 20737682 20738006 -68766547 - AluY SINE Alu 0 311 1 1228 252 136 31 chr17 20738248 20738971 -68765582 - L2 LINE L2 0 3313 2509 336 294 109 0 chr17 20739164 20739256 -68765297 - L2 LINE L2 0 3272 3171 273 294 101 0 chr17 20739311 20739420 -68765133 - L1MC5 LINE L1 -519 7442 7323 496 316 81 60 chr17 20739727 20740004 -68764549 + L2 LINE L2 2816 3086 -227 1603 176 76 0 chr17 20740004 20740293 -68764260 - AluJb SINE Alu -1 311 1 496 316 81 60 chr17 20740293 20740362 -68764191 + L2 LINE L2 3086 3152 -161 1655 178 13 10 chr17 20740362 20740660 -68763893 + AluJo SINE Alu 1 299 -13 496 316 81 60 chr17 20740660 20740796 -68763757 + L2 LINE L2 3152 3309 -4 218 264 0 143 chr17 20741048 20741077 -68763476 - MIR SINE MIR -62 146 114 1834 138 6 44 chr17 20741077 20741210 -68763343 + AluSx SINE Alu 3 139 -173 2251 94 3 3 chr17 20741210 20741508 -68763045 + AluSg SINE Alu 1 298 -12 1834 138 6 44 chr17 20741508 20741692 -68762861 + AluSx SINE Alu 139 308 -4 218 264 0 143 chr17 20741692 20741753 -68762800 - MIR SINE MIR -94 114 69 2082 107 17 33 chr17 20741937 20742093 -68762460 - AluSx SINE Alu -18 294 144 1914 146 0 7 chr17 20742093 20742387 -68762166 - AluSx SINE Alu 0 312 21 2082 107 17 33 chr17 20742387 20742529 -68762024 - AluSx SINE Alu -168 144 1 2449 74 13 0 chr17 20742796 20743105 -68761448 - AluSp SINE Alu 0 313 1 2096 131 7 0 chr17 20744319 20744616 -68759937 - AluSx SINE Alu -13 299 1 256 286 12 0 chr17 20745591 20745675 -68758878 + L1MEc LINE L1 77 161 -6235 1381 279 76 56 chr17 20745684 20745741 -68758812 + L1MEc LINE L1 260 314 -6082 1985 81 77 0 chr17 20745741 20746013 -68758540 + AluSq SINE Alu 1 293 -20 1381 279 76 56 chr17 20746013 20746497 -68758056 + L1MEc LINE L1 314 787 -5609 2133 107 0 3 chr17 20746497 20746796 -68757757 + AluSq SINE Alu 1 298 -15 1381 279 76 56 chr17 20746796 20746957 -68757596 + L1MEc LINE L1 787 983 -5413 1847 114 42 39 chr17 20746957 20747265 -68757288 + AluSg SINE Alu 1 309 -1 1381 279 76 56 chr17 20747265 20747333 -68757220 + L1MEc LINE L1 983 1048 -5348 2213 92 3 7 chr17 20747343 20747647 -68756906 + AluSp SINE Alu 1 303 -10 219 300 67 50 chr17 20747695 20747815 -68756738 + MIR3 SINE MIR 84 205 -3 326 353 49 0 chr17 20748047 20748169 -68756384 - L1ME LINE L1 -417 5704 5577 318 272 179 19 chr17 20748189 20748351 -68756202 + MIR SINE MIR 68 255 -7 21 36 0 0 chr17 20749292 20749320 -68755233 + AT_rich Low_complexity Low_complexity 1 28 0 189 74 0 0 chr17 20749630 20749657 -68754896 + (TA)n Simple_repeat Simple_repeat 1 27 0 24 85 0 0 chr17 20749844 20749903 -68754650 + AT_rich Low_complexity Low_complexity 1 59 0 2112 111 3 7 chr17 20751146 20751453 -68753100 + AluSx SINE Alu 1 306 -6 1918 149 0 3 chr17 20751458 20751754 -68752799 + AluSx SINE Alu 1 295 -17 2217 98 0 0 chr17 20751757 20752052 -68752501 + AluY SINE Alu 1 295 -16 1669 108 100 18 chr17 20752056 20752335 -68752218 + AluSq SINE Alu 1 302 -11 2291 86 3 0 chr17 20752550 20752851 -68751702 - AluSp SINE Alu -11 302 1 243 219 154 81 chr17 20754156 20754279 -68750274 - L2 LINE L2 -4 3309 3178 2214 78 3 10 chr17 20754314 20754609 -68749944 + AluY SINE Alu 1 293 -18 188 232 313 30 chr17 20755125 20755224 -68749329 - MIR SINE MIR 0 262 136 786 108 18 0 chr17 20755231 20755342 -68749211 - FLAM_C SINE Alu -10 133 21 334 164 134 30 chr17 20755344 20755411 -68749142 - MER5A DNA MER1_type -115 74 1 393 278 119 0 chr17 20755970 20756096 -68748457 - L2 LINE L2 0 3313 3173 25 65 0 0 chr17 20757019 20757065 -68747488 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr17 20757153 20757176 -68747377 + AT_rich Low_complexity Low_complexity 1 23 0 1842 93 3 80 chr17 20757229 20757530 -68747023 - AluSx SINE Alu -34 278 1 2136 235 64 10 chr17 20758015 20758264 -68746289 + Charlie1a DNA MER1_type 1 235 -2526 2094 111 3 3 chr17 20758264 20758561 -68745992 + AluSx SINE Alu 2 298 -14 2136 235 64 10 chr17 20758561 20758830 -68745723 + Charlie1a DNA MER1_type 235 547 -908 1604 144 67 3 chr17 20758830 20759114 -68745439 - AluJo SINE Alu -4 308 7 1072 148 38 63 chr17 20759119 20759192 -68745361 + Charlie1a DNA MER1_type 733 806 -1955 1819 123 47 36 chr17 20759192 20759493 -68745060 - AluSx SINE Alu -8 304 1 729 191 0 8 chr17 20759501 20759627 -68744926 - FLAM_C SINE Alu -8 125 1 1072 148 38 63 chr17 20759627 20759781 -68744772 + Charlie1a DNA MER1_type 813 963 -492 2218 102 10 0 chr17 20759790 20760095 -68744458 + AluSp SINE Alu 1 308 -5 750 103 0 19 chr17 20760096 20760203 -68744350 + LTR7 LTR ERV1 346 450 0 1877 203 27 55 chr17 20760215 20760741 -68743812 + HERVH LTR ERV1 12 522 -7191 * 13150 136 6 8 chr17 20760711 20762744 -68741809 + HERVH LTR ERV1 801 2830 -4883 4010 148 0 5 chr17 20762744 20763384 -68741169 + HERVH LTR ERV1 3357 3993 -3720 3561 166 2 21 chr17 20763370 20764018 -68740535 + HERVH LTR ERV1 3949 4551 -2735 * 1442 161 28 0 chr17 20764009 20764263 -68740290 + HERVH LTR ERV1 5756 6016 -1697 * 3921 95 7 9 chr17 20764256 20764814 -68739739 + HERVH LTR ERV1 7157 7713 0 894 162 107 54 chr17 20764814 20765155 -68739398 + LTR7 LTR ERV1 1 402 -48 306 50 0 0 chr17 20765155 20765195 -68739358 + (CA)n Simple_repeat Simple_repeat 1 40 0 2306 76 0 13 chr17 20765197 20765512 -68739041 + AluY SINE Alu 1 311 0 1893 142 7 0 chr17 20765545 20765847 -68738706 + AluSg SINE Alu 1 304 -6 1211 177 110 0 chr17 20765863 20766173 -68738380 + Charlie1a DNA MER1_type 1014 1357 -98 1967 143 0 0 chr17 20766205 20766499 -68738054 + AluSx SINE Alu 1 294 -18 2219 86 6 19 chr17 20766628 20766943 -68737610 + AluSq SINE Alu 1 311 -2 1580 160 22 41 chr17 20766955 20767455 -68737098 + AluJb SINE Alu 1 494 0 205 118 59 0 chr17 20767455 20767489 -68737064 + GA-rich Low_complexity Low_complexity 1 36 0 933 218 9 18 chr17 20767496 20767725 -68736828 + AluJb SINE Alu 85 311 -1 1601 153 57 3 chr17 20767787 20768069 -68736484 + AluJo SINE Alu 3 299 -13 2027 102 51 3 chr17 20768071 20768366 -68736187 + AluSp SINE Alu 1 309 -4 26 30 0 0 chr17 20768391 20768424 -68736129 + AT_rich Low_complexity Low_complexity 1 33 0 2361 77 0 0 chr17 20768539 20768838 -68735715 + AluY SINE Alu 1 299 -12 21 71 0 0 chr17 20768924 20768966 -68735587 + AT_rich Low_complexity Low_complexity 1 42 0 2144 102 7 0 chr17 20769129 20769422 -68735131 - AluSx SINE Alu -17 295 1 753 197 0 0 chr17 20769447 20769569 -68734984 + FLAM_C SINE Alu 2 123 -20 186 43 0 0 chr17 20769570 20769593 -68734960 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 321 200 24 47 chr17 20769597 20769682 -68734871 - MLT1H1 LTR MaLR -77 478 396 704 278 163 10 chr17 20769870 20770165 -68734388 - L1ME3A LINE L1 -274 5896 5557 1131 79 6 0 chr17 20770172 20770337 -68734216 - AluY SINE Alu -10 301 136 2529 40 0 0 chr17 20770337 20770640 -68733913 - AluY SINE Alu -8 303 1 3347 146 15 58 chr17 20770646 20770701 -68733852 - MER49 LTR ERV1 0 923 867 2307 40 34 10 chr17 20770701 20770999 -68733554 - AluY SINE Alu -6 305 1 3347 146 15 58 chr17 20770999 20771382 -68733171 - MER49 LTR ERV1 -56 867 516 1731 88 0 92 chr17 20771382 20771564 -68732989 - AluSx SINE Alu -18 294 146 1875 72 0 34 chr17 20771564 20771828 -68732725 - AluY SINE Alu -2 309 55 1731 88 0 92 chr17 20771828 20771928 -68732625 - AluSx SINE Alu -166 146 38 3347 146 15 58 chr17 20771928 20772097 -68732456 - MER49 LTR ERV1 -407 516 341 742 188 0 8 chr17 20772101 20772229 -68732324 + FRAM SINE Alu 28 154 -22 1123 125 0 0 chr17 20772229 20772389 -68732164 - AluSq SINE Alu -20 293 134 2084 116 3 0 chr17 20772389 20772690 -68731863 - AluSx SINE Alu -10 302 1 1645 130 47 14 chr17 20772694 20772970 -68731583 - AluSq SINE Alu -16 297 13 308 125 0 0 chr17 20773225 20773265 -68731288 - Alu SINE Alu -267 41 2 1884 138 31 0 chr17 20773310 20773599 -68730954 + AluSg SINE Alu 3 300 -10 939 201 12 0 chr17 20773609 20773773 -68730780 + FRAM SINE Alu 1 166 0 512 191 109 18 chr17 20774126 20774236 -68730317 + FLAM_C SINE Alu 2 121 -12 203 172 52 0 chr17 20774240 20774298 -68730255 + (TA)n Simple_repeat Simple_repeat 1 61 0 922 298 54 17 chr17 20774302 20774778 -68729775 - L2 LINE L2 -69 3244 2702 4150 163 17 30 chr17 20774818 20775147 -68729406 - L1PB4 LINE L1 -2 6154 5822 2145 98 0 10 chr17 20775147 20775443 -68729110 - AluSg SINE Alu -17 293 1 4150 163 17 30 chr17 20775443 20775887 -68728666 - L1PB4 LINE L1 -334 5822 5391 1286 167 11 57 chr17 20775887 20776150 -68728403 - L1MC1 LINE L1 0 6333 6083 277 114 0 0 chr17 20776171 20776215 -68728338 - L1M4 LINE L1 -2192 3954 3911 2141 107 3 0 chr17 20777007 20777316 -68727237 - AluSq SINE Alu -3 310 1 364 248 50 10 chr17 20777434 20777535 -68727018 - MIR SINE MIR -109 153 49 580 201 15 30 chr17 20777606 20777740 -68726813 - Charlie1 DNA MER1_type -1 2760 2629 1221 209 59 14 chr17 20777740 20778027 -68726526 + AluJo SINE Alu 1 300 -12 965 115 0 38 chr17 20778032 20778189 -68726364 + AluSq/x SINE Alu 1 151 -162 306 133 0 0 chr17 20778189 20778234 -68726319 - AluSg/x SINE Alu -83 217 173 1829 128 4 0 chr17 20778384 20778657 -68725896 - AluSx SINE Alu -18 294 21 23 33 0 0 chr17 20778780 20778810 -68725743 + AT_rich Low_complexity Low_complexity 1 30 0 368 281 128 20 chr17 20779049 20779252 -68725301 + LTR16A LTR ERVL 219 443 -7 2156 129 0 0 chr17 20779346 20779656 -68724897 - AluSx SINE Alu -2 310 1 510 217 9 17 chr17 20779746 20779861 -68724692 + MER21B LTR ERV1 323 436 -427 198 317 32 49 chr17 20780162 20780285 -68724268 + L2 LINE L2 2963 3083 -189 414 78 0 0 chr17 20780285 20780336 -68724217 - AluSq/x SINE Alu -203 109 59 541 217 0 0 chr17 20780336 20780428 -68724125 - MER21B LTR ERV1 -449 414 323 871 194 0 29 chr17 20780509 20780684 -68723869 - AluJo SINE Alu -142 170 1 2403 75 0 0 chr17 20780695 20781001 -68723552 - AluY SINE Alu -5 306 1 2427 77 0 0 chr17 20781015 20781326 -68723227 - AluY SINE Alu 0 311 1 1020 147 6 0 chr17 20781860 20782016 -68722537 - AluSg/x SINE Alu -21 291 135 507 33 0 0 chr17 20782016 20782077 -68722476 + (TG)n Simple_repeat Simple_repeat 1 61 0 1995 124 0 0 chr17 20782077 20782359 -68722194 - AluSq SINE Alu -31 282 1 2071 113 0 17 chr17 20782781 20783082 -68721471 + AluSx SINE Alu 1 296 -16 2282 53 0 7 chr17 20783504 20783811 -68720742 + AluY SINE Alu 1 305 0 1990 129 0 3 chr17 20783823 20784117 -68720436 + AluSx SINE Alu 1 293 -19 2137 125 3 0 chr17 20784119 20784423 -68720130 + AluSx SINE Alu 1 305 -7 27 29 0 0 chr17 20786177 20786211 -68718342 + GC_rich Low_complexity Low_complexity 1 34 0 1988 74 0 44 chr17 20786969 20787288 -68717265 - AluSx SINE Alu 0 306 1 439 299 25 13 chr17 20788222 20788379 -68716174 - MER103 DNA DNA -6 160 2 21 36 0 0 chr17 20788577 20788605 -68715948 + AT_rich Low_complexity Low_complexity 1 28 0 38 22 0 0 chr17 20788703 20788748 -68715805 + AT_rich Low_complexity Low_complexity 1 45 0 1920 117 7 23 chr17 20789015 20789314 -68715239 - AluSx SINE Alu -18 294 1 872 159 0 0 chr17 20789343 20789475 -68715078 - FLAM_C SINE Alu -1 132 1 21 71 0 0 chr17 20789504 20789546 -68715007 + AT_rich Low_complexity Low_complexity 1 42 0 1035 161 0 6 chr17 20789822 20790002 -68714551 + AluJo SINE Alu 123 301 -11 487 206 43 85 chr17 20790253 20790272 -68714281 - L2 LINE L2 0 3313 3295 1967 122 7 3 chr17 20790272 20790567 -68713986 - AluSq SINE Alu -17 296 1 487 206 43 85 chr17 20790567 20790688 -68713865 - L2 LINE L2 -18 3295 3179 2044 124 7 3 chr17 20790733 20791031 -68713522 + AluSp SINE Alu 1 299 -14 2084 115 7 0 chr17 20791112 20791407 -68713146 + AluSx SINE Alu 9 305 -7 2364 64 3 0 chr17 20791936 20792234 -68712319 - AluY SINE Alu -12 299 1 922 133 7 0 chr17 20792413 20792556 -68711997 - AluSp/q SINE Alu -9 304 161 593 70 0 0 chr17 20792566 20792637 -68711916 - tRNA-Gly-GGG tRNA tRNA -3 71 1 2235 90 3 0 chr17 20792675 20792974 -68711579 + AluSp SINE Alu 1 300 -13 445 264 71 72 chr17 20793467 20793543 -68711010 - L1ME LINE L1 -331 5835 5760 1463 185 17 31 chr17 20793543 20793835 -68710718 + AluJo SINE Alu 1 288 -24 445 264 71 72 chr17 20793835 20793999 -68710554 - L1ME LINE L1 -406 5760 5600 1782 116 8 19 chr17 20794019 20794287 -68710266 - AluSq SINE Alu -48 265 1 23 0 0 0 chr17 20794317 20794340 -68710213 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr17 20794351 20794395 -68710158 + AT_rich Low_complexity Low_complexity 1 44 0 848 121 17 0 chr17 20794395 20794511 -68710042 - AluJb SINE Alu -194 118 1 187 43 0 0 chr17 20794524 20794547 -68710006 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2177 109 3 0 chr17 20794547 20794831 -68709722 - AluSq SINE Alu -28 285 1 549 255 107 79 chr17 20795005 20795098 -68709455 - L2 LINE L2 -64 3208 3119 1949 163 0 0 chr17 20795098 20795399 -68709154 - AluJb SINE Alu -9 303 3 549 255 107 79 chr17 20795399 20795824 -68708729 - L2 LINE L2 -153 3119 2688 299 280 48 16 chr17 20795934 20796059 -68708494 + L1ME2 LINE L1 4888 5016 -1130 2234 106 0 7 chr17 20796192 20796495 -68708058 - AluSx SINE Alu -11 301 1 2412 76 0 16 chr17 20796514 20796828 -68707725 - AluY SINE Alu -2 309 1 1120 207 48 27 chr17 20796875 20796919 -68707634 + L1ME2 LINE L1 5812 5854 -310 2487 60 0 0 chr17 20796919 20797218 -68707335 - AluY SINE Alu -12 299 1 1120 207 48 27 chr17 20797218 20797468 -68707085 + L1ME2 LINE L1 5854 6112 -52 874 160 0 77 chr17 20797468 20797649 -68706904 - FRAM SINE Alu -8 168 2 1501 122 0 0 chr17 20797890 20798095 -68706458 - AluSg/x SINE Alu 0 312 108 2624 46 0 0 chr17 20798095 20798397 -68706156 - AluY SINE Alu -9 302 1 2088 120 0 3 chr17 20798404 20798696 -68705857 - AluSg SINE Alu -15 295 5 1835 129 87 0 chr17 20799215 20799502 -68705051 - AluSx SINE Alu 0 312 1 474 154 0 55 chr17 20799557 20799648 -68704905 + MLT1A2 LTR MaLR 1 87 -279 2427 67 0 3 chr17 20799648 20799945 -68704608 + AluY SINE Alu 1 296 -15 1930 148 0 25 chr17 20800080 20800398 -68704155 + AluJb SINE Alu 1 310 -2 2434 67 0 7 chr17 20800568 20800696 -68703857 + AluY SINE Alu 1 128 -183 180 0 0 0 chr17 20800696 20800716 -68703837 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2434 67 0 7 chr17 20800716 20800885 -68703668 + AluY SINE Alu 128 296 -15 25 51 0 0 chr17 20801106 20801145 -68703408 + AT_rich Low_complexity Low_complexity 1 39 0 2373 81 7 0 chr17 20801217 20801512 -68703041 - AluY SINE Alu -12 299 3 1128 135 0 0 chr17 20801515 20801678 -68702875 - AluY SINE Alu -16 295 133 2171 96 3 63 chr17 20801678 20802010 -68702543 - AluSx SINE Alu 0 312 1 2211 121 0 6 chr17 20802083 20802397 -68702156 - AluSx SINE Alu 0 312 1 2207 103 0 42 chr17 20802400 20802710 -68701843 - AluSx SINE Alu -15 297 1 822 196 0 0 chr17 20802710 20802843 -68701710 - AluJo SINE Alu -178 134 2 2261 61 10 31 chr17 20802903 20803196 -68701357 - AluY SINE Alu -24 287 1 21 57 0 0 chr17 20804021 20804056 -68700497 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 20804180 20804202 -68700351 + AT_rich Low_complexity Low_complexity 1 22 0 2309 95 0 0 chr17 20804938 20805232 -68699321 - AluSg SINE Alu -5 305 12 27 29 0 0 chr17 20805581 20805615 -68698938 + AT_rich Low_complexity Low_complexity 1 34 0 458 71 0 0 chr17 20805615 20805671 -68698882 - U6 snRNA snRNA -51 56 1 445 246 126 24 chr17 20805694 20805861 -68698692 - MIR SINE MIR -71 191 8 1913 138 10 3 chr17 20805893 20806183 -68698370 + AluSx SINE Alu 1 292 -20 2292 104 0 0 chr17 20807084 20807381 -68697172 - AluSx SINE Alu -15 297 1 2114 100 0 53 chr17 20807591 20807912 -68696641 - AluSx SINE Alu -8 304 1 188 200 0 0 chr17 20807950 20807980 -68696573 - MIR3 SINE MIR -32 176 147 186 384 41 14 chr17 20807980 20808023 -68696530 - L3b LINE CR1 -28 1555 1481 40 0 0 0 chr17 20809152 20809192 -68695361 + AT_rich Low_complexity Low_complexity 1 40 0 549 220 59 8 chr17 20809315 20809433 -68695120 + FLAM_A SINE Alu 1 124 -9 302 255 31 10 chr17 20809660 20809758 -68694795 - L1MC4 LINE L1 -18 8024 7925 2340 95 0 3 chr17 20809781 20810086 -68694467 + AluSg SINE Alu 1 304 -6 2687 51 3 0 chr17 20811243 20811555 -68692998 + AluSp SINE Alu 1 313 0 2047 117 0 39 chr17 20812838 20813146 -68691407 - AluSx SINE Alu -16 296 1 21 36 0 0 chr17 20813156 20813184 -68691369 + AT_rich Low_complexity Low_complexity 1 28 0 294 243 278 28 chr17 20813678 20813752 -68690801 - L1MC/D LINE L1 -2020 5788 5734 267 31 0 0 chr17 20813752 20813784 -68690769 + (TG)n Simple_repeat Simple_repeat 2 33 0 294 243 278 28 chr17 20813784 20813853 -68690700 - L1MC/D LINE L1 -2074 5734 5609 320 294 70 48 chr17 20813883 20814049 -68690504 - L1MC/D LINE L1 -2271 5537 5365 2189 126 10 0 chr17 20814049 20814358 -68690195 - AluSx SINE Alu 0 312 1 320 294 70 48 chr17 20814358 20814378 -68690175 - L1MC/D LINE L1 -2443 5365 5347 2421 81 0 13 chr17 20814685 20814995 -68689558 - AluY SINE Alu -5 306 1 1990 222 97 19 chr17 20815361 20816285 -68688268 - L2 LINE L2 -1 3312 2223 1851 152 0 11 chr17 20816289 20816600 -68687953 - AluJb SINE Alu 0 313 6 1674 181 0 74 chr17 20816630 20816806 -68687747 - AluJo SINE Alu 0 302 115 240 35 0 0 chr17 20816806 20816835 -68687718 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2242 85 0 4 chr17 20816835 20817116 -68687437 - AluSg1 SINE Alu -29 280 1 1953 102 0 102 chr17 20817118 20817308 -68687245 - AluSq SINE Alu -13 300 157 2394 99 0 0 chr17 20817308 20817612 -68686941 - AluSg SINE Alu -6 304 1 1953 102 0 102 chr17 20817612 20817755 -68686798 - AluSq SINE Alu -156 157 1 1674 181 0 74 chr17 20817755 20817900 -68686653 - AluJo SINE Alu -187 115 1 2439 55 0 3 chr17 20818011 20818304 -68686249 - AluY SINE Alu -19 292 1 725 196 25 6 chr17 20818307 20818470 -68686083 - L1M4c LINE L1 -3106 3276 3111 253 248 79 0 chr17 20818471 20818572 -68685981 + MSTA LTR MaLR 1 109 -319 451 149 241 0 chr17 20818572 20818659 -68685894 - AluJb SINE Alu -203 109 2 630 168 134 28 chr17 20818659 20818838 -68685715 - L1M4c LINE L1 -3899 2485 2288 638 235 0 0 chr17 20819291 20819410 -68685143 - AluJb SINE Alu -52 260 142 1726 161 4 0 chr17 20819444 20819723 -68684830 + AluJb SINE Alu 28 307 -5 1056 192 39 32 chr17 20819725 20819836 -68684717 - L1 LINE L1 -2989 3393 3284 2075 134 7 13 chr17 20819836 20820141 -68684412 - AluSx SINE Alu -9 303 1 2098 130 0 7 chr17 20820143 20820442 -68684111 - AluSx SINE Alu -15 297 1 1056 192 39 32 chr17 20820442 20820608 -68683945 - L1 LINE L1 -3098 3284 3111 1191 153 129 69 chr17 20820609 20820941 -68683612 + THE1C LTR MaLR 1 339 -36 2074 128 3 0 chr17 20820941 20821239 -68683314 - AluSx SINE Alu -13 299 1 1191 153 129 69 chr17 20821239 20821279 -68683274 + THE1C LTR MaLR 339 375 0 254 132 29 29 chr17 20821281 20821349 -68683204 - L1 LINE L1 -3270 3112 3045 2407 191 105 47 chr17 20821408 20821483 -68683070 - L1 LINE L1 -3324 3058 2989 1528 197 7 27 chr17 20821483 20821782 -68682771 + AluJo SINE Alu 1 293 -19 2407 191 105 47 chr17 20821782 20822128 -68682425 - L1 LINE L1 -3393 2989 2665 2385 90 0 10 chr17 20822128 20822429 -68682124 - AluSg SINE Alu -12 298 1 1595 193 10 7 chr17 20822436 20822731 -68681822 - AluJb SINE Alu -16 296 1 2407 191 105 47 chr17 20822731 20822894 -68681659 - L1 LINE L1 -3722 2660 2508 1297 171 167 8 chr17 20822894 20823157 -68681396 - AluSx SINE Alu -7 305 1 2407 191 105 47 chr17 20823157 20824042 -68680511 - L1 LINE L1 -3874 2508 1393 2280 95 7 0 chr17 20824059 20824355 -68680198 - AluSp SINE Alu -15 298 1 277 331 74 51 chr17 20824561 20824736 -68679817 + MIR SINE MIR 4 182 -80 2514 53 0 7 chr17 20825009 20825311 -68679242 - AluY SINE Alu -11 300 1 35 63 0 0 chr17 20825568 20825631 -68678922 + AT_rich Low_complexity Low_complexity 1 63 0 2303 77 3 0 chr17 20825959 20826280 -68678273 - AluSp SINE Alu 0 322 1 1966 116 58 0 chr17 20826282 20826557 -68677996 - AluSx SINE Alu -21 291 1 228 303 75 30 chr17 20827020 20827183 -68677370 + MIR SINE MIR 20 184 -77 2062 101 50 7 chr17 20827510 20827807 -68676746 - AluSx SINE Alu -2 310 1 236 228 148 40 chr17 20827933 20828034 -68676519 + MIR SINE MIR 124 235 -27 205 321 168 10 chr17 20828215 20828411 -68676142 + MIR SINE MIR 36 262 0 802 204 0 39 chr17 20828763 20828944 -68675609 + AluJo SINE Alu 47 220 -92 250 118 0 39 chr17 20828944 20828995 -68675558 + FLAM_A SINE Alu 85 133 0 2196 123 0 0 chr17 20828999 20829308 -68675245 + AluY SINE Alu 1 309 -2 2048 142 0 19 chr17 20829317 20829633 -68674920 + AluSx SINE Alu 1 310 -2 1910 145 35 0 chr17 20829700 20829990 -68674563 + AluSx SINE Alu 1 300 -12 596 126 13 2 chr17 20829999 20830229 -68674324 + AluJ SINE Alu 1 287 -25 2286 93 0 0 chr17 20830671 20830960 -68673593 - AluSx SINE Alu -23 289 1 196 303 123 41 chr17 20830961 20831083 -68673470 - L2 LINE L2 0 3313 3182 817 211 0 0 chr17 20831326 20831482 -68673071 - MER3 DNA MER1_type -82 127 19 2512 70 0 0 chr17 20831638 20831939 -68672614 + AluSc SINE Alu 1 301 -8 608 317 94 57 chr17 20832296 20832899 -68671654 - L2 LINE L2 -941 2373 1723 2328 95 0 0 chr17 20832899 20833194 -68671359 + AluSg SINE Alu 14 308 -2 608 317 94 57 chr17 20833194 20833502 -68671051 - L2 LINE L2 -1591 1723 1428 224 300 138 0 chr17 20833539 20833619 -68670934 + MIR SINE MIR 54 144 -118 2372 54 0 4 chr17 20833645 20833924 -68670629 - AluY SINE Alu -13 298 21 241 69 0 0 chr17 20833924 20833953 -68670600 - AluY SINE Alu -257 42 14 195 273 18 0 chr17 20833972 20834027 -68670526 + MIR SINE MIR 204 259 -3 851 36 18 27 chr17 20836116 20836228 -68668325 - L1PA4 LINE L1 0 6155 6045 2244 82 3 70 chr17 20836405 20836736 -68667817 + AluSg SINE Alu 2 310 0 835 193 93 0 chr17 20836869 20837030 -68667523 + MER46A DNA MER2_type 1 176 -60 746 215 0 8 chr17 20837139 20837269 -68667284 + FLAM_C SINE Alu 2 130 -3 1450 169 135 4 chr17 20837274 20837540 -68667013 + AluJo SINE Alu 2 302 0 294 29 0 0 chr17 20837545 20837580 -68666973 + (TA)n Simple_repeat Simple_repeat 1 35 0 533 257 65 36 chr17 20837983 20838290 -68666263 - L1M4 LINE L1 -1449 4697 4382 446 204 124 9 chr17 20838293 20838406 -68666147 + L2 LINE L2 1874 1999 -1315 326 174 210 18 chr17 20838515 20838682 -68665871 - HAL1 LINE L1 -1314 1193 995 1083 263 93 55 chr17 20838698 20839150 -68665403 - HAL1 LINE L1 -1687 820 352 1981 196 18 25 chr17 20839226 20839619 -68664934 + MER47B DNA MER2_type 28 417 -1 279 317 49 7 chr17 20839619 20839761 -68664792 - L1MA9 LINE L1 -82 6230 6083 * 1125 233 52 0 chr17 20839759 20840029 -68664524 - HAL1 LINE L1 -2132 375 92 226 272 138 59 chr17 20840176 20840243 -68664310 - L1MC4a LINE L1 -1460 6348 6288 2350 107 0 7 chr17 20840243 20840552 -68664001 + AluSx SINE Alu 1 307 -5 226 272 138 59 chr17 20840552 20840738 -68663815 - L1MC4a LINE L1 -1520 6288 6075 224 301 0 32 chr17 20840791 20840884 -68663669 + L2 LINE L2 3065 3154 -159 868 142 8 0 chr17 20840885 20841012 -68663541 - FLAM_C SINE Alu -5 128 1 24 67 0 0 chr17 20841612 20841657 -68662896 + AT_rich Low_complexity Low_complexity 1 45 0 2368 98 3 0 chr17 20841728 20842035 -68662518 - AluY SINE Alu -3 308 1 1134 131 0 0 chr17 20842069 20842229 -68662324 - AluSg/x SINE Alu -19 293 134 2345 95 3 3 chr17 20842229 20842534 -68662019 - AluSx SINE Alu -7 305 1 5222 174 18 11 chr17 20842539 20843858 -68660695 - L1MB2 LINE L1 -3 6168 4839 1977 86 8 4 chr17 20843868 20844123 -68660430 - AluSq SINE Alu -20 293 38 307 244 35 23 chr17 20844123 20844209 -68660344 - MER119 DNA MER1_type -496 87 1 455 270 45 34 chr17 20846288 20846466 -68658087 - MLT1J LTR MaLR -331 180 1 253 169 28 28 chr17 20847479 20847550 -68657003 + (TA)n Simple_repeat Simple_repeat 2 72 0 316 284 57 11 chr17 20847638 20847726 -68656827 + HAL1 LINE L1 37 128 -2379 1008 104 0 15 chr17 20847749 20847884 -68656669 - FLAM_C SINE Alu 0 133 1 440 329 61 26 chr17 20848173 20848401 -68656152 + L1MC4a LINE L1 5668 5903 -1905 4880 187 122 19 chr17 20848405 20849717 -68654836 + Charlie1 DNA MER1_type 1 2755 -6 234 266 99 47 chr17 20849724 20849916 -68654637 + L1MC4a LINE L1 5901 6102 -1706 1839 152 3 37 chr17 20850370 20850693 -68653860 - AluJb SINE Alu 0 312 1 1288 276 58 15 chr17 20851673 20852083 -68652470 - LTR16B LTR ERVL 0 464 37 2363 98 0 0 chr17 20852807 20853104 -68651449 - AluSg SINE Alu -13 297 1 23 33 0 0 chr17 20853145 20853175 -68651378 + AT_rich Low_complexity Low_complexity 1 30 0 2102 142 0 10 chr17 20854669 20854971 -68649582 - AluSx SINE Alu -11 301 3 353 227 246 59 chr17 20854973 20855176 -68649377 - MIR SINE MIR 0 262 22 2188 150 211 19 chr17 20855177 20855604 -68648949 - LTR22 LTR ERVK 0 509 1 533 185 0 0 chr17 20856409 20856501 -68648052 - MLT1D LTR MaLR 0 505 414 225 0 0 0 chr17 20856611 20856636 -68647917 + (T)n Simple_repeat Simple_repeat 1 25 0 254 275 53 92 chr17 20856834 20856893 -68647660 + MER5A DNA MER1_type 63 123 -66 2095 79 0 11 chr17 20856893 20857160 -68647393 - AluY SINE Alu -18 293 30 254 275 53 92 chr17 20857160 20857231 -68647322 + MER5A DNA MER1_type 123 188 -1 3193 154 53 68 chr17 20857354 20857704 -68646849 - L1MCb LINE L1 -4836 1728 1374 318 79 0 0 chr17 20857704 20857742 -68646811 - tRNA-Lys-AAG tRNA tRNA -38 38 1 3193 154 53 68 chr17 20857742 20858393 -68646160 - L1MCb LINE L1 -5190 1374 724 1499 221 32 52 chr17 20858399 20858623 -68645930 - L1M4 LINE L1 -1093 6472 6260 2420 115 27 27 chr17 20858623 20858998 -68645555 + THE1C LTR MaLR 1 375 0 1499 221 32 52 chr17 20858998 20859213 -68645340 - L1M4 LINE L1 -1305 6260 6042 698 101 0 0 chr17 20859232 20859331 -68645222 - AluY SINE Alu 0 311 213 972 179 62 12 chr17 20859394 20859624 -68644929 - MSTD LTR MaLR 0 396 114 4917 160 51 30 chr17 20859624 20860115 -68644438 - L1M4 LINE L1 -2869 4696 4217 1693 143 46 55 chr17 20860115 20860284 -68644269 - AluSx SINE Alu -6 306 140 2083 137 0 0 chr17 20860284 20860577 -68643976 - AluSx SINE Alu -15 297 5 1693 143 46 55 chr17 20860577 20860714 -68643839 - AluSx SINE Alu -172 140 3 4917 160 51 30 chr17 20860714 20861553 -68643000 - L1M4 LINE L1 -3348 4217 3316 2215 115 0 0 chr17 20861553 20861849 -68642704 - AluSq SINE Alu -17 296 1 4917 160 51 30 chr17 20861849 20862037 -68642516 - L1M4 LINE L1 -4249 3316 3133 * 12803 146 109 16 chr17 20862023 20864324 -68640229 - L1M4 LINE L1 -5028 2537 21 251 285 0 73 chr17 20864337 20864474 -68640079 - L1MEc LINE L1 -4539 2599 2473 1282 167 21 103 chr17 20864532 20864697 -68639856 + AluSq SINE Alu 1 127 -176 2118 125 0 3 chr17 20864697 20865000 -68639553 + AluSc SINE Alu 1 302 -7 1282 167 21 103 chr17 20865000 20865164 -68639389 + AluSq SINE Alu 127 303 0 710 278 163 10 chr17 20865171 20865466 -68639087 + L1ME3A LINE L1 5557 5896 -274 310 198 74 66 chr17 20865620 20865741 -68638812 + MLT1H1 LTR MaLR 395 516 -74 186 43 0 0 chr17 20865743 20865766 -68638787 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 800 171 0 0 chr17 20865767 20865890 -68638663 - FLAM_C SINE Alu -20 123 1 26 30 0 0 chr17 20866005 20866038 -68638515 + AT_rich Low_complexity Low_complexity 1 33 0 1725 90 62 12 chr17 20866063 20866307 -68638246 - AluSp SINE Alu -6 307 52 1664 199 10 0 chr17 20866659 20866960 -68637593 - AluJb SINE Alu -8 304 1 263 198 81 12 chr17 20866966 20867052 -68637501 - L1MEc LINE L1 -4544 2415 2324 2008 214 96 45 chr17 20867288 20867956 -68636597 - L1MEc LINE L1 -4686 2273 1572 1397 113 0 5 chr17 20867968 20868163 -68636390 - AluSq SINE Alu -119 194 1 316 26 0 0 chr17 20868184 20868222 -68636331 + AluY SINE Alu 255 292 -8 890 256 39 32 chr17 20868224 20868439 -68636114 - L1MEc LINE L1 -5345 1514 1295 2329 123 0 0 chr17 20868439 20868749 -68635804 - AluSx SINE Alu -2 310 1 890 256 39 32 chr17 20868749 20868814 -68635739 - L1MEc LINE L1 -5564 1295 1232 1909 152 17 0 chr17 20869026 20869328 -68635225 + AluJb SINE Alu 1 307 -5 1056 192 39 32 chr17 20869330 20869441 -68635112 - L1 LINE L1 -2989 3393 3284 2075 134 7 13 chr17 20869441 20869746 -68634807 - AluSx SINE Alu -9 303 1 2098 130 0 7 chr17 20869748 20870047 -68634506 - AluSx SINE Alu -15 297 1 1056 192 39 32 chr17 20870047 20870213 -68634340 - L1 LINE L1 -3098 3284 3111 1191 153 129 69 chr17 20870214 20870546 -68634007 + THE1C LTR MaLR 1 339 -36 2074 128 3 0 chr17 20870546 20870844 -68633709 - AluSx SINE Alu -13 299 1 1191 153 129 69 chr17 20870844 20870884 -68633669 + THE1C LTR MaLR 339 375 0 254 132 29 29 chr17 20870886 20870954 -68633599 - L1 LINE L1 -3270 3112 3045 2407 191 105 47 chr17 20871013 20871088 -68633465 - L1 LINE L1 -3324 3058 2989 1528 197 7 27 chr17 20871088 20871387 -68633166 + AluJo SINE Alu 1 293 -19 2407 191 105 47 chr17 20871387 20871733 -68632820 - L1 LINE L1 -3393 2989 2665 2385 90 0 10 chr17 20871733 20872034 -68632519 - AluSg SINE Alu -12 298 1 1595 193 10 7 chr17 20872041 20872336 -68632217 - AluJb SINE Alu -16 296 1 2407 191 105 47 chr17 20872336 20872499 -68632054 - L1 LINE L1 -3722 2660 2508 1297 171 167 8 chr17 20872499 20872762 -68631791 - AluSx SINE Alu -7 305 1 2407 191 105 47 chr17 20872762 20873647 -68630906 - L1 LINE L1 -3874 2508 1393 2280 95 7 0 chr17 20873664 20873960 -68630593 - AluSp SINE Alu -15 298 1 277 331 74 51 chr17 20874166 20874341 -68630212 + MIR SINE MIR 4 182 -80 2514 53 0 7 chr17 20874614 20874916 -68629637 - AluY SINE Alu -11 300 1 35 63 0 0 chr17 20875173 20875236 -68629317 + AT_rich Low_complexity Low_complexity 1 63 0 2303 77 3 0 chr17 20875564 20875885 -68628668 - AluSp SINE Alu 0 322 1 1966 116 58 0 chr17 20875887 20876162 -68628391 - AluSx SINE Alu -21 291 1 228 303 75 30 chr17 20876625 20876788 -68627765 + MIR SINE MIR 20 184 -77 2062 101 50 7 chr17 20877115 20877412 -68627141 - AluSx SINE Alu -2 310 1 236 228 148 40 chr17 20877538 20877639 -68626914 + MIR SINE MIR 124 235 -27 205 321 168 10 chr17 20877820 20878016 -68626537 + MIR SINE MIR 36 262 0 802 204 0 39 chr17 20878368 20878549 -68626004 + AluJo SINE Alu 47 220 -92 250 118 0 39 chr17 20878549 20878600 -68625953 + FLAM_A SINE Alu 85 133 0 2196 123 0 0 chr17 20878604 20878913 -68625640 + AluY SINE Alu 1 309 -2 2048 142 0 19 chr17 20878922 20879238 -68625315 + AluSx SINE Alu 1 310 -2 1910 145 35 0 chr17 20879305 20879595 -68624958 + AluSx SINE Alu 1 300 -12 596 126 13 2 chr17 20879604 20879834 -68624719 + AluJ SINE Alu 1 287 -25 2286 93 0 0 chr17 20880276 20880565 -68623988 - AluSx SINE Alu -23 289 1 196 303 123 41 chr17 20880566 20880688 -68623865 - L2 LINE L2 0 3313 3182 817 211 0 0 chr17 20880931 20881087 -68623466 - MER3 DNA MER1_type -82 127 19 2512 70 0 0 chr17 20881243 20881544 -68623009 + AluSc SINE Alu 1 301 -8 608 317 94 57 chr17 20881901 20882504 -68622049 - L2 LINE L2 -941 2373 1723 2328 95 0 0 chr17 20882504 20882799 -68621754 + AluSg SINE Alu 14 308 -2 608 317 94 57 chr17 20882799 20883107 -68621446 - L2 LINE L2 -1591 1723 1428 224 300 138 0 chr17 20883144 20883224 -68621329 + MIR SINE MIR 54 144 -118 2372 54 0 4 chr17 20883250 20883529 -68621024 - AluY SINE Alu -13 298 21 241 69 0 0 chr17 20883529 20883558 -68620995 - AluY SINE Alu -259 42 14 195 273 18 0 chr17 20883577 20883632 -68620921 + MIR SINE MIR 204 259 -3 851 36 18 27 chr17 20885721 20885833 -68618720 - L1PA4 LINE L1 0 6155 6045 2244 82 3 70 chr17 20886010 20886341 -68618212 + AluSg SINE Alu 2 310 0 835 193 93 0 chr17 20886474 20886635 -68617918 + MER46A DNA MER2_type 1 176 -60 746 215 0 8 chr17 20886744 20886874 -68617679 + FLAM_C SINE Alu 2 130 -3 1448 173 135 4 chr17 20886879 20887145 -68617408 + AluJo SINE Alu 2 302 0 294 29 0 0 chr17 20887150 20887185 -68617368 + (TA)n Simple_repeat Simple_repeat 2 36 0 533 257 65 36 chr17 20887588 20887895 -68616658 - L1M4 LINE L1 -1449 4697 4382 446 204 124 9 chr17 20887898 20888011 -68616542 + L2 LINE L2 1874 1999 -1315 326 174 210 18 chr17 20888120 20888287 -68616266 - HAL1 LINE L1 -1314 1193 995 1083 263 93 55 chr17 20888303 20888755 -68615798 - HAL1 LINE L1 -1687 820 352 1981 196 18 25 chr17 20888831 20889224 -68615329 + MER47B DNA MER2_type 28 417 -1 279 317 49 7 chr17 20889224 20889366 -68615187 - L1MA9 LINE L1 -82 6230 6083 * 1125 233 52 0 chr17 20889364 20889634 -68614919 - HAL1 LINE L1 -2132 375 92 226 272 138 59 chr17 20889781 20889848 -68614705 - L1MC4a LINE L1 -1460 6348 6288 2350 107 0 7 chr17 20889848 20890157 -68614396 + AluSx SINE Alu 1 307 -5 226 272 138 59 chr17 20890157 20890343 -68614210 - L1MC4a LINE L1 -1520 6288 6075 224 301 0 32 chr17 20890396 20890489 -68614064 + L2 LINE L2 3065 3154 -159 868 142 8 0 chr17 20890490 20890617 -68613936 - FLAM_C SINE Alu -5 128 1 24 67 0 0 chr17 20891217 20891262 -68613291 + AT_rich Low_complexity Low_complexity 1 45 0 2376 97 3 0 chr17 20891332 20891640 -68612913 - AluY SINE Alu -2 309 1 1134 131 0 0 chr17 20891674 20891834 -68612719 - AluSg/x SINE Alu -19 293 134 2345 95 3 3 chr17 20891834 20892139 -68612414 - AluSx SINE Alu -7 305 1 5222 174 18 11 chr17 20892144 20893463 -68611090 - L1MB2 LINE L1 -3 6168 4839 1977 86 8 4 chr17 20893473 20893728 -68610825 - AluSq SINE Alu -20 293 38 307 244 35 23 chr17 20893728 20893814 -68610739 - MER119 DNA MER1_type -496 87 1 447 270 45 34 chr17 20895893 20896071 -68608482 - MLT1J LTR MaLR -331 180 1 253 169 28 28 chr17 20897084 20897155 -68607398 + (TA)n Simple_repeat Simple_repeat 2 72 0 311 284 57 11 chr17 20897243 20897331 -68607222 + HAL1 LINE L1 37 128 -2379 954 104 0 15 chr17 20897354 20897489 -68607064 - FLAM_C SINE Alu 0 133 1 422 329 61 26 chr17 20897778 20898006 -68606547 + L1MC4a LINE L1 5668 5903 -1905 4792 187 122 19 chr17 20898010 20899322 -68605231 + Charlie1 DNA MER1_type 1 2755 -6 307 305 131 34 chr17 20899329 20899565 -68604988 + L1MC4a LINE L1 5901 6159 -1649 1860 152 3 37 chr17 20899975 20900298 -68604255 - AluJb SINE Alu 0 312 1 1308 276 58 15 chr17 20901278 20901688 -68602865 - LTR16B LTR ERVL 0 464 37 2382 98 0 0 chr17 20902412 20902709 -68601844 - AluSg SINE Alu -13 297 1 23 33 0 0 chr17 20902750 20902780 -68601773 + AT_rich Low_complexity Low_complexity 1 30 0 2113 142 0 10 chr17 20904274 20904576 -68599977 - AluSx SINE Alu -11 301 3 319 186 127 85 chr17 20904663 20904781 -68599772 - MIR SINE MIR -118 144 22 2039 150 211 19 chr17 20904782 20905209 -68599344 - LTR22 LTR ERVK 0 509 1 529 185 0 0 chr17 20906014 20906106 -68598447 - MLT1D LTR MaLR 0 505 414 234 0 0 0 chr17 20906216 20906242 -68598311 + (T)n Simple_repeat Simple_repeat 1 26 0 215 282 53 92 chr17 20906440 20906499 -68598054 + MER5A DNA MER1_type 63 123 -66 2116 79 0 11 chr17 20906499 20906766 -68597787 - AluY SINE Alu -18 293 30 215 282 53 92 chr17 20906766 20906837 -68597716 + MER5A DNA MER1_type 123 188 -1 3153 154 53 68 chr17 20906960 20907310 -68597243 - L1MCb LINE L1 -4836 1728 1374 319 79 0 0 chr17 20907310 20907348 -68597205 - tRNA-Lys-AAG tRNA tRNA -38 38 1 3153 154 53 68 chr17 20907348 20907999 -68596554 - L1MCb LINE L1 -5190 1374 724 1473 221 32 52 chr17 20908005 20908229 -68596324 - L1M4 LINE L1 -1093 6472 6260 2275 115 27 27 chr17 20908229 20908604 -68595949 + THE1C LTR MaLR 1 375 0 1473 221 32 52 chr17 20908604 20908819 -68595734 - L1M4 LINE L1 -1305 6260 6042 667 101 0 0 chr17 20908838 20908937 -68595616 - AluY SINE Alu 0 311 213 967 180 62 12 chr17 20909000 20909230 -68595323 - MSTD LTR MaLR 0 396 114 4842 161 51 30 chr17 20909230 20909721 -68594832 - L1M4 LINE L1 -2869 4696 4217 1712 143 46 55 chr17 20909721 20909890 -68594663 - AluSx SINE Alu -6 306 140 2100 137 0 0 chr17 20909890 20910183 -68594370 - AluSx SINE Alu -15 297 5 1712 143 46 55 chr17 20910183 20910320 -68594233 - AluSx SINE Alu -172 140 3 4842 161 51 30 chr17 20910320 20911159 -68593394 - L1M4 LINE L1 -3348 4217 3316 2231 115 0 0 chr17 20911159 20911455 -68593098 - AluSq SINE Alu -17 296 1 4842 161 51 30 chr17 20911455 20911643 -68592910 - L1M4 LINE L1 -4249 3316 3133 * 12862 146 109 16 chr17 20911629 20913930 -68590623 - L1M4 LINE L1 -5028 2537 21 241 285 0 73 chr17 20913943 20914080 -68590473 - L1MEc LINE L1 -4539 2024 1898 953 163 6 6 chr17 20914139 20914299 -68590254 + FRAM SINE Alu 1 160 -16 2308 82 34 0 chr17 20914303 20914595 -68589958 + AluSc SINE Alu 1 302 -7 500 237 9 7 chr17 20914711 20914846 -68589707 - L1MEc LINE L1 -4594 1923 1656 2429 98 0 0 chr17 20914847 20915153 -68589400 - AluSx SINE Alu -1 311 6 286 270 29 27 chr17 20915715 20915897 -68588656 + MIR SINE MIR 75 253 -9 2107 120 7 17 chr17 20916073 20916373 -68588180 + AluSq SINE Alu 1 297 -16 26 0 0 0 chr17 20916377 20916403 -68588150 + AT_rich Low_complexity Low_complexity 1 26 0 2169 135 6 6 chr17 20916764 20917076 -68587477 + AluJb SINE Alu 1 312 0 25 0 0 0 chr17 20917334 20917359 -68587194 + AT_rich Low_complexity Low_complexity 1 25 0 2334 79 0 3 chr17 20918115 20918405 -68586148 - AluSg SINE Alu -7 303 15 2200 110 0 0 chr17 20918630 20918956 -68585597 - AluSx SINE Alu 0 326 1 1928 148 6 31 chr17 20920038 20920356 -68584197 + AluJb SINE Alu 1 310 -2 2297 114 7 0 chr17 20921391 20921698 -68582855 - AluSx SINE Alu -3 309 1 2277 122 0 3 chr17 20922029 20922340 -68582213 - AluSx SINE Alu -1 311 2 786 187 0 0 chr17 20922836 20922959 -68581594 + FLAM_A SINE Alu 1 123 -10 285 127 18 18 chr17 20923377 20923432 -68581121 + L2 LINE L2 3259 3313 0 284 252 193 8 chr17 20924065 20924184 -68580369 + MIR SINE MIR 8 148 -114 2056 129 0 0 chr17 20924185 20924464 -68580089 + AluSx SINE Alu 1 279 -33 480 170 0 0 chr17 20924470 20924576 -68579977 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 238 200 55 0 chr17 20924580 20924635 -68579918 + MIR SINE MIR 154 211 -51 25 0 0 0 chr17 20927028 20927053 -68577500 + AT_rich Low_complexity Low_complexity 1 25 0 189 283 43 33 chr17 20927140 20927232 -68577321 - MIR SINE MIR -115 147 55 1866 121 68 11 chr17 20928295 20928576 -68575977 - AluSg SINE Alu -13 297 1 2436 50 20 3 chr17 20928589 20928888 -68575665 - AluY SINE Alu -5 306 3 393 291 140 0 chr17 20929820 20929999 -68574554 + MIR SINE MIR 44 247 -15 228 254 189 41 chr17 20930285 20930407 -68574146 - MIR SINE MIR -64 198 59 1854 131 4 11 chr17 20931817 20932091 -68572462 - AluSx SINE Alu -19 293 22 1003 149 6 40 chr17 20932158 20932332 -68572221 - AluSg/x SINE Alu -14 296 129 225 0 0 0 chr17 20932332 20932357 -68572196 + (TG)n Simple_repeat Simple_repeat 2 26 0 2261 92 18 0 chr17 20932358 20932642 -68571911 - AluSx SINE Alu -23 289 1 213 363 30 0 chr17 20932909 20933044 -68571509 + MIR SINE MIR 86 224 -38 373 235 37 0 chr17 20933491 20933571 -68570982 - MER58B DNA MER1_type 0 341 259 501 211 9 26 chr17 20933571 20933685 -68570868 - Tigger7 DNA MER2_type 0 2587 2476 754 194 69 7 chr17 20933690 20933834 -68570719 - Tigger7 DNA MER2_type -321 229 77 2197 111 13 3 chr17 20933840 20934147 -68570406 - AluSx SINE Alu -2 310 1 334 276 122 30 chr17 20934248 20934423 -68570130 + MIR SINE MIR 65 254 -8 2393 106 0 0 chr17 20935519 20935822 -68568731 + AluSq SINE Alu 1 303 -10 498 239 62 34 chr17 20936269 20936445 -68568108 + L2 LINE L2 3119 3299 -14 2225 101 14 0 chr17 20936501 20936797 -68567756 - AluSq SINE Alu -13 300 1 553 219 0 0 chr17 20936843 20936957 -68567596 - MIR SINE MIR -130 132 19 2276 106 3 0 chr17 20937155 20937457 -68567096 - AluSx SINE Alu -9 303 1 901 213 167 62 chr17 20937663 20938147 -68566406 - MLT1H LTR MaLR 0 549 15 271 160 85 85 chr17 20938166 20938260 -68566293 - LTR67 LTR ERVL -30 527 434 264 304 99 56 chr17 20938331 20938492 -68566061 - LTR67 LTR ERVL -269 288 121 297 299 20 13 chr17 20938727 20938946 -68565607 + HERVL LTR ERVL 4032 4326 -1438 330 26 0 0 chr17 20939624 20939663 -68564890 + (GGA)n Simple_repeat Simple_repeat 2 40 0 2300 103 0 7 chr17 20939779 20940080 -68564473 - AluSx SINE Alu -13 299 1 3477 164 48 5 chr17 20940281 20940950 -68563603 + L1MB3 LINE L1 5485 6182 -1 742 102 0 9 chr17 20942193 20942301 -68562252 - AluSp SINE Alu -205 108 2 1317 110 62 73 chr17 20942306 20942529 -68562024 - L1MB3 LINE L1 -128 6055 5831 2249 124 3 0 chr17 20942529 20942835 -68561718 - AluSx SINE Alu -5 307 1 1272 176 126 8 chr17 20942842 20943104 -68561449 - AluJo SINE Alu -9 293 1 1317 110 62 73 chr17 20943104 20943144 -68561409 - L1MB3 LINE L1 -358 5825 5787 350 368 41 23 chr17 20944950 20945121 -68559432 + L1M4 LINE L1 2441 2614 -3532 861 211 66 9 chr17 20946600 20946813 -68557740 + MIR SINE MIR 38 262 0 2311 107 0 0 chr17 20946866 20947175 -68557378 + AluSg1 SINE Alu 1 309 0 446 293 234 32 chr17 20947177 20947554 -68556999 + L1M4 LINE L1 4942 5389 -757 1495 172 4 4 chr17 20948908 20949164 -68555389 - AluJo SINE Alu -56 256 1 911 165 16 6 chr17 20949164 20949346 -68555207 - L1MA4 LINE L1 -224 6076 5893 1143 129 43 69 chr17 20949397 20949574 -68554979 - AluJo SINE Alu 0 312 141 2367 79 3 10 chr17 20949574 20949879 -68554674 - AluSx SINE Alu -9 303 1 1143 129 43 69 chr17 20949879 20949933 -68554620 - AluJo SINE Alu -171 141 87 225 0 0 0 chr17 20950018 20950043 -68554510 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 666 324 108 27 chr17 20950169 20950769 -68553784 - L2 LINE L2 -65 3207 2560 1751 132 61 0 chr17 20950793 20951073 -68553480 + AluJb SINE Alu 16 312 0 183 248 74 83 chr17 20951175 20951296 -68553257 + L2 LINE L2 612 731 -2583 215 290 142 30 chr17 20952172 20952341 -68552212 - L2 LINE L2 0 3313 3126 206 331 69 23 chr17 20952358 20952488 -68552065 - L2 LINE L2 -429 2885 2750 388 277 41 82 chr17 20953608 20953803 -68550750 + MIR SINE MIR 2 188 -74 867 140 0 0 chr17 20954842 20954985 -68549568 + (CA)n Simple_repeat Simple_repeat 1 143 0 239 73 49 0 chr17 20955015 20955056 -68549497 + CT-rich Low_complexity Low_complexity 2 44 0 1864 91 0 30 chr17 20955224 20955487 -68549066 - AluSq SINE Alu -58 255 1 213 200 11 78 chr17 20956765 20956855 -68547698 + C-rich Low_complexity Low_complexity 4 87 0 2097 107 3 19 chr17 20957157 20957474 -68547079 - AluSx SINE Alu 0 312 1 245 294 261 5 chr17 20959645 20959863 -68544690 - L2 LINE L2 -48 3224 2951 281 229 49 49 chr17 20960598 20960624 -68543929 - L1ME4a LINE L1 -1 6120 6095 1760 157 0 47 chr17 20960624 20960942 -68543611 + AluJo SINE Alu 1 303 -9 281 229 49 49 chr17 20960942 20961037 -68543516 - L1ME4a LINE L1 -25 6096 5999 463 353 0 0 chr17 20962113 20962246 -68542307 + MIR SINE MIR 28 160 -102 339 234 144 9 chr17 20962770 20962881 -68541672 - MIR3 SINE MIR -31 177 52 1888 144 16 16 chr17 20964694 20965006 -68539547 + AluJo SINE Alu 1 312 0 203 337 102 44 chr17 20965007 20965351 -68539202 + L2 LINE L2 1700 2063 -1251 759 320 123 5 chr17 20965357 20965504 -68539049 + L2 LINE L2 2232 2360 -954 2235 107 0 0 chr17 20965504 20965803 -68538750 - AluSg SINE Alu -11 299 1 759 320 123 5 chr17 20965803 20966086 -68538467 + L2 LINE L2 2360 2713 -601 1464 172 97 30 chr17 20966092 20966125 -68538428 + MER67C LTR ERV1 5 34 -676 1766 171 3 20 chr17 20966125 20966430 -68538123 + AluJo SINE Alu 2 301 -11 1464 172 97 30 chr17 20966430 20966757 -68537796 + MER67C LTR ERV1 34 389 -321 1727 193 10 0 chr17 20966758 20967064 -68537489 + AluJb SINE Alu 1 309 -3 202 244 146 12 chr17 20967072 20967154 -68537399 + L2 LINE L2 2748 2840 -474 454 300 66 40 chr17 20967233 20967460 -68537093 + L2 LINE L2 3080 3312 -1 2025 142 0 13 chr17 20967550 20967860 -68536693 - AluSx SINE Alu -6 306 1 210 346 115 8 chr17 20967862 20967992 -68536561 + L3 LINE CR1 902 1045 -532 1767 148 38 0 chr17 20968187 20968478 -68536075 - AluJb SINE Alu -4 308 7 184 268 36 0 chr17 20968481 20968537 -68536016 - MIR SINE MIR -63 145 88 213 336 21 86 chr17 20968617 20968757 -68535796 + L3b LINE CR1 1177 1307 -276 1975 122 7 0 chr17 20969258 20969545 -68535008 + AluSx SINE Alu 24 312 0 183 265 118 0 chr17 20970740 20970808 -68533745 - MER5B DNA MER1_type -44 134 59 2286 113 0 0 chr17 20970827 20971137 -68533416 - AluSx SINE Alu -2 310 1 811 91 0 50 chr17 20971137 20971258 -68533295 - AluSq/x SINE Alu -177 135 21 579 87 0 29 chr17 20971294 20971397 -68533156 - MLT1A1 LTR MaLR -265 100 1 2185 99 3 0 chr17 20971935 20972229 -68532324 + AluSq SINE Alu 1 295 -18 2206 93 0 19 chr17 20972377 20972687 -68531866 - AluSg SINE Alu -6 304 1 311 346 148 0 chr17 20972852 20973014 -68531539 + MIR SINE MIR 77 262 0 310 250 0 0 chr17 20974348 20974416 -68530137 - MER117 DNA MER1_type -18 179 112 583 270 75 17 chr17 20974514 20974734 -68529819 + MIR SINE MIR 16 242 -20 237 180 0 0 chr17 20974866 20974916 -68529637 + CT-rich Low_complexity Low_complexity 3 52 0 335 314 111 34 chr17 20975105 20975217 -68529336 - MIR SINE MIR 0 262 160 3136 156 26 26 chr17 20975217 20975261 -68529292 - L1MB2 LINE L1 -3 6168 6125 2149 103 0 17 chr17 20975261 20975563 -68528990 + AluSx SINE Alu 1 297 -15 3136 156 26 26 chr17 20975563 20976083 -68528470 - L1MB2 LINE L1 -45 6126 5604 335 314 111 34 chr17 20976083 20976177 -68528376 - MIR SINE MIR -102 160 40 226 258 112 0 chr17 20977359 20977448 -68527105 + MLT1L LTR MaLR 41 139 -476 788 234 65 9 chr17 20977515 20977729 -68526824 + L1ME3A LINE L1 5945 6170 0 2847 6 0 0 chr17 20977737 20978051 -68526502 + AluYb8 SINE Alu 1 314 -4 303 93 0 0 chr17 20978122 20978165 -68526388 + (T)n Simple_repeat Simple_repeat 1 43 0 2407 145 10 64 chr17 20978555 20978595 -68525958 - L1MB8 LINE L1 -6 6172 6131 2329 52 0 45 chr17 20978595 20978903 -68525650 - AluY SINE Alu -17 294 1 2407 145 10 64 chr17 20978903 20979359 -68525194 - L1MB8 LINE L1 -47 6131 5703 2698 142 69 32 chr17 20979456 20979991 -68524562 - L1MC2 LINE L1 -1 6343 5789 256 286 13 0 chr17 20980210 20980287 -68524266 + GA-rich Low_complexity Low_complexity 2 79 0 204 173 58 0 chr17 20981084 20981136 -68523417 + GA-rich Low_complexity Low_complexity 2 56 0 294 278 117 43 chr17 20981140 20981302 -68523251 + MLT1H LTR MaLR 8 181 -374 197 262 33 0 chr17 20984533 20984594 -68519959 + MIR SINE MIR 42 104 -104 2197 89 3 3 chr17 20985583 20985896 -68518657 + AluSq SINE Alu 1 313 0 269 250 52 9 chr17 20985926 20986042 -68518511 - L1ME4a LINE L1 -35 6086 5966 2247 82 0 3 chr17 20988174 20988482 -68516071 - AluSc SINE Alu 0 307 1 29 0 0 0 chr17 20988487 20988516 -68516037 + AT_rich Low_complexity Low_complexity 1 29 0 334 292 165 34 chr17 20989072 20989195 -68515358 - L1ME4a LINE L1 -3 6118 6013 2247 86 3 3 chr17 20989195 20989485 -68515068 - AluSx SINE Alu -22 290 1 334 292 165 34 chr17 20989485 20989971 -68514582 - L1ME4a LINE L1 -108 6013 5415 2343 94 10 0 chr17 20989971 20990280 -68514273 - AluSx SINE Alu 0 312 1 334 292 165 34 chr17 20990280 20990323 -68514230 - L1ME4a LINE L1 -706 5415 5379 348 298 189 45 chr17 20990342 20990481 -68514072 - L1ME4a LINE L1 -815 5331 5213 2131 99 20 0 chr17 20990481 20990775 -68513778 + AluSp SINE Alu 1 300 -13 348 298 189 45 chr17 20990775 20990837 -68513716 - L1ME4a LINE L1 -933 5213 5161 2363 78 0 0 chr17 20990837 20991131 -68513422 + AluSq SINE Alu 1 294 -19 348 298 189 45 chr17 20991131 20991240 -68513313 - L1ME4a LINE L1 -985 5161 4975 630 240 52 82 chr17 20991884 20992151 -68512402 - MIR SINE MIR -2 260 2 342 296 160 0 chr17 20994140 20994265 -68510288 - MIR SINE MIR -27 235 91 283 307 80 7 chr17 20995412 20995549 -68509004 - MIR3 SINE MIR -60 148 2 2055 133 7 3 chr17 20995691 20995992 -68508561 + AluJb SINE Alu 1 302 -10 521 198 95 86 chr17 20996380 20996468 -68508085 + Charlie8 DNA MER1_type 62 148 -2269 2224 110 10 3 chr17 20996468 20996767 -68507786 + AluSg SINE Alu 1 301 -9 521 198 95 86 chr17 20996767 20996910 -68507643 + Charlie8 DNA MER1_type 148 295 -2122 782 179 49 22 chr17 20998023 20998207 -68506346 - MER5A DNA MER1_type 0 189 1 181 191 235 0 chr17 20999053 20999121 -68505432 + MIR SINE MIR 161 244 -18 1474 111 0 39 chr17 20999466 20999674 -68504879 - AluJo SINE Alu -15 297 98 599 168 0 0 chr17 20999796 20999891 -68504662 - AluJo SINE Alu -217 95 1 2445 92 0 7 chr17 21000401 21000706 -68503847 - AluSx SINE Alu -9 303 1 1990 139 7 13 chr17 21000808 21001110 -68503443 - AluJo SINE Alu -12 300 1 2171 213 75 9 chr17 21001323 21001872 -68502681 - L1ME1 LINE L1 -4 6162 5578 1580 151 0 76 chr17 21001911 21002215 -68502338 + AluJo SINE Alu 25 305 -7 1013 215 93 23 chr17 21002216 21002518 -68502035 - L1ME1 LINE L1 -1050 5096 4774 1213 171 21 1 chr17 21002519 21002815 -68501738 + MER2 DNA MER2_type 2 344 -1 414 158 61 0 chr17 21002815 21002897 -68501656 + L1MB2 LINE L1 6085 6171 0 1927 144 7 13 chr17 21002935 21003241 -68501312 + AluSx SINE Alu 1 304 -8 692 227 43 0 chr17 21003357 21003520 -68501033 - L1ME1 LINE L1 -1371 4775 4606 481 293 64 0 chr17 21003530 21003687 -68500866 - L1M4 LINE L1 -693 5481 5315 1504 204 0 32 chr17 21003695 21004008 -68500545 + AluJo SINE Alu 1 303 -9 308 172 234 0 chr17 21004062 21004126 -68500427 + MSTD LTR MaLR 1 79 -317 608 193 0 0 chr17 21004126 21004235 -68500318 - FLAM_C SINE Alu 0 143 35 2270 81 0 24 chr17 21004282 21004580 -68499973 - AluY SINE Alu -20 291 1 1474 189 26 8 chr17 21004580 21004845 -68499708 + MSTD LTR MaLR 127 396 0 1808 165 74 85 chr17 21004845 21005111 -68499442 - MLT1C LTR MaLR -12 455 188 2166 104 3 39 chr17 21005111 21005419 -68499134 - AluSc SINE Alu -12 297 1 1808 165 74 85 chr17 21005419 21005566 -68498987 - MLT1C LTR MaLR -279 188 45 2057 138 3 3 chr17 21005566 21005862 -68498691 + AluSq SINE Alu 1 296 -17 1808 165 74 85 chr17 21005862 21005907 -68498646 - MLT1C LTR MaLR -422 45 1 565 83 94 10 chr17 21005907 21006003 -68498550 - L1M4 LINE L1 -848 5298 5195 23 0 0 0 chr17 21006003 21006026 -68498527 + AT_rich Low_complexity Low_complexity 1 23 0 990 158 35 6 chr17 21006078 21006249 -68498304 - FRAM SINE Alu 0 40 1 1030 111 142 40 chr17 21006257 21006483 -68498070 - L1MA8 LINE L1 -26 6265 6017 * 6134 217 54 59 chr17 21006458 21006658 -68497895 - L1M4 LINE L1 -949 5197 4998 2390 88 0 0 chr17 21006658 21006954 -68497599 - AluSg SINE Alu -14 296 1 6134 217 54 59 chr17 21006954 21007778 -68496775 - L1M4 LINE L1 -1148 4998 4171 2025 116 14 0 chr17 21007778 21007952 -68496601 - AluSx SINE Alu -16 296 115 237 33 0 0 chr17 21007952 21007982 -68496571 + (TTA)n Simple_repeat Simple_repeat 1 30 0 2025 116 14 0 chr17 21007982 21008099 -68496454 - AluSx SINE Alu -197 115 1 6134 217 54 59 chr17 21008099 21008451 -68496102 - L1M4 LINE L1 -1975 4171 3819 2261 108 0 0 chr17 21008451 21008739 -68495814 - AluSc SINE Alu -21 288 1 6134 217 54 59 chr17 21008739 21009337 -68495216 - L1M4 LINE L1 -2327 3819 3229 2299 107 0 0 chr17 21009337 21009637 -68494916 - AluSg SINE Alu -5 305 6 6134 217 54 59 chr17 21009637 21009706 -68494847 - L1M4 LINE L1 -2917 3229 3161 * 11009 172 47 56 chr17 21009695 21010454 -68494099 - L1MA3 LINE L1 0 7724 6960 2335 74 3 17 chr17 21010454 21010753 -68493800 - AluSp SINE Alu -18 295 1 11009 172 47 56 chr17 21010753 21011868 -68492685 - L1MA3 LINE L1 -764 6960 5837 2097 160 0 0 chr17 21011868 21012175 -68492378 - AluJb SINE Alu -5 307 1 11009 172 47 56 chr17 21012175 21012383 -68492170 - L1MA3 LINE L1 -1887 5837 5629 1634 143 0 126 chr17 21012383 21012725 -68491828 + AluJo SINE Alu 1 299 -3 1377 139 162 34 chr17 21012733 21012999 -68491554 + AluSx SINE Alu 2 301 -1 11009 172 47 56 chr17 21012999 21013695 -68490858 - L1MA3 LINE L1 -2102 5622 4922 304 81 0 0 chr17 21013695 21013732 -68490821 - U2 snRNA snRNA -151 37 1 11009 172 47 56 chr17 21013732 21015316 -68489237 - L1MA3 LINE L1 -2802 4922 3326 2104 122 3 7 chr17 21015316 21015611 -68488942 - AluSq SINE Alu -19 294 1 11009 172 47 56 chr17 21015611 21015762 -68488791 - L1MA3 LINE L1 -4398 3326 3175 224 30 30 0 chr17 21015762 21015795 -68488758 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4745 96 21 12 chr17 21015795 21016777 -68487776 - SVA Other Other -645 1363 1 11009 172 47 56 chr17 21016777 21016878 -68487675 - L1MA3 LINE L1 -4548 3176 3076 918 135 0 0 chr17 21016878 21017011 -68487542 - FLAM_C SINE Alu 0 133 1 11009 172 47 56 chr17 21017011 21017378 -68487175 - L1MA3 LINE L1 -4648 3076 3241 715 216 0 0 chr17 21017378 21017503 -68487050 + FLAM_A SINE Alu 1 125 -8 11009 172 47 56 chr17 21017503 21017609 -68486944 - L1MA3 LINE L1 -4482 3242 3137 225 326 11 11 chr17 21017588 21017680 -68486873 - L1M4 LINE L1 -5576 966 875 * 269 320 45 26 chr17 21017758 21017914 -68486639 - L1M4 LINE L1 -5668 874 716 904 108 36 92 chr17 21018208 21018403 -68486150 - MER20 DNA MER1_type 0 219 36 2071 151 134 50 chr17 21018835 21019224 -68485329 + MLT1D LTR MaLR 3 358 -147 324 0 0 0 chr17 21019224 21019260 -68485293 + (TG)n Simple_repeat Simple_repeat 1 36 0 1674 95 136 0 chr17 21019264 21019506 -68485047 - AluSx SINE Alu -37 275 1 2071 151 134 50 chr17 21019506 21019575 -68484978 + MLT1D LTR MaLR 360 505 0 207 317 81 12 chr17 21019711 21019872 -68484681 + MIR SINE MIR 71 242 -20 2419 65 0 0 chr17 21020351 21020641 -68483912 - AluY SINE Alu -4 307 18 2025 142 0 7 chr17 21021099 21021394 -68483159 - AluSx SINE Alu -19 293 1 264 341 15 7 chr17 21021875 21022010 -68482543 - MIR SINE MIR -114 148 13 1946 158 7 3 chr17 21024921 21025218 -68479335 - AluJb SINE Alu -14 298 1 262 298 0 53 chr17 21026952 21027066 -68477487 - MIR3 SINE MIR -23 185 78 2309 111 0 0 chr17 21027848 21028154 -68476399 - AluSx SINE Alu -6 306 1 398 20 20 0 chr17 21028192 21028243 -68476310 + (CAAAAA)n Simple_repeat Simple_repeat 1 52 0 2276 104 3 0 chr17 21028529 21028828 -68475725 - AluSg SINE Alu -10 300 1 814 201 169 0 chr17 21029339 21029528 -68475025 - MER58A DNA MER1_type 0 224 4 478 284 52 26 chr17 21030113 21030342 -68474211 - MIR SINE MIR -22 240 6 2548 63 0 3 chr17 21030729 21031029 -68473524 + AluSc SINE Alu 1 299 -10 934 124 0 15 chr17 21031081 21031218 -68473335 + FRAM SINE Alu 36 170 -6 340 245 58 19 chr17 21031228 21031383 -68473170 + L1ME4a LINE L1 4456 4616 -1530 222 356 0 0 chr17 21031557 21031630 -68472923 + MIR SINE MIR 15 87 -175 1997 151 10 26 chr17 21031650 21031962 -68472591 + AluJb SINE Alu 1 307 -5 206 238 0 0 chr17 21031978 21032020 -68472533 + MIR SINE MIR 217 258 -4 2155 125 0 19 chr17 21032263 21032575 -68471978 - AluSx SINE Alu -6 306 1 230 53 79 0 chr17 21032593 21032631 -68471922 + A-rich Low_complexity Low_complexity 3 43 0 1537 109 5 9 chr17 21032672 21032893 -68471660 - AluSg/x SINE Alu -4 306 87 343 132 0 0 chr17 21032894 21032947 -68471606 - Alu SINE Alu -247 53 1 2043 143 0 0 chr17 21033042 21033336 -68471217 + AluSx SINE Alu 1 294 -18 305 279 126 0 chr17 21033514 21033707 -68470846 + L1ME4a LINE L1 5383 5605 -516 2016 154 7 0 chr17 21033731 21034036 -68470517 + AluSx SINE Alu 1 307 -5 686 236 141 19 chr17 21034157 21034470 -68470083 + L1ME4a LINE L1 5614 5964 -157 25 0 0 0 chr17 21034608 21034633 -68469920 + AT_rich Low_complexity Low_complexity 1 25 0 342 133 117 0 chr17 21034633 21034693 -68469860 + L1MA9 LINE L1 6072 6138 -174 2237 103 0 3 chr17 21034757 21035095 -68469458 - AluSx SINE Alu 0 312 1 181 280 75 37 chr17 21035101 21035208 -68469345 - L2 LINE L2 -1311 2003 1893 342 223 121 15 chr17 21035336 21035542 -68469011 + L2 LINE L2 2434 2661 -653 347 0 23 0 chr17 21036170 21036213 -68468340 + (CA)n Simple_repeat Simple_repeat 2 45 0 1729 74 5 5 chr17 21038574 21038790 -68465763 - AluSp SINE Alu -20 293 78 300 247 12 37 chr17 21039354 21039435 -68465118 + MLT1L LTR MaLR 132 210 -405 309 279 47 76 chr17 21039580 21039752 -68464801 + MLT1L LTR MaLR 447 613 -2 601 243 29 0 chr17 21040805 21040941 -68463612 + MER58B DNA MER1_type 202 341 0 191 337 63 11 chr17 21041193 21041278 -68463275 - MER5A DNA MER1_type -1 188 99 190 262 0 0 chr17 21041278 21041320 -68463233 + MER5B DNA MER1_type 1 42 -136 1825 161 13 10 chr17 21041723 21042027 -68462526 - AluJb SINE Alu -7 305 1 1934 165 0 3 chr17 21042029 21042326 -68462227 - AluJo SINE Alu -8 304 9 2054 150 3 0 chr17 21042347 21042640 -68461913 - AluSx SINE Alu -18 294 1 2167 103 0 70 chr17 21042818 21043147 -68461406 - AluSx SINE Alu -6 306 1 554 212 29 36 chr17 21045654 21045791 -68458762 + MIR SINE MIR 1 136 -126 2464 205 23 25 chr17 21046718 21047322 -68457231 + pTR5 LTR ERV1 743 1345 -1093 4628 91 24 122 chr17 21047337 21048248 -68456305 + LTR12 LTR ERV1 5 826 0 2241 113 0 0 chr17 21048249 21048542 -68456011 + AluSx SINE Alu 5 297 -15 188 302 0 19 chr17 21050311 21050364 -68454189 + L2 LINE L2 3002 3053 -219 2444 87 0 0 chr17 21050835 21051145 -68453408 + AluY SINE Alu 1 310 -1 895 148 7 21 chr17 21051162 21051304 -68453249 + FRAM SINE Alu 20 159 -17 2293 101 3 16 chr17 21051377 21051693 -68452860 + AluSx SINE Alu 1 312 0 418 274 176 7 chr17 21051731 21051884 -68452669 + MER5A DNA MER1_type 11 189 0 508 128 0 23 chr17 21052000 21052086 -68452467 + HY4 scRNA scRNA 1 84 -9 415 275 56 13 chr17 21052091 21052270 -68452283 + L1M4 LINE L1 5197 5382 -801 538 268 76 40 chr17 21053558 21053860 -68450693 + L2 LINE L2 1935 2247 -1067 2522 103 98 14 chr17 21053919 21054338 -68450215 + MER4C LTR ERV1 12 465 0 2429 127 84 27 chr17 21054341 21055024 -68449529 + MER4C-int LTR ERV1 1 841 -5757 1989 130 3 23 chr17 21055064 21055372 -68449181 - AluJo SINE Alu -10 302 1 411 239 182 25 chr17 21055400 21055559 -68448994 + LTR50 LTR ERVL 18 201 -594 254 164 36 0 chr17 21055806 21055861 -68448692 + LTR33A LTR ERVL 459 515 -8 907 288 118 26 chr17 21055916 21056458 -68448095 + L2 LINE L2 2715 3300 -13 198 0 0 0 chr17 21056458 21056480 -68448073 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2262 113 7 0 chr17 21057114 21057414 -68447139 - AluSg SINE Alu -8 302 1 259 139 0 0 chr17 21057739 21057782 -68446771 + MIR SINE MIR 211 253 -9 203 354 0 0 chr17 21058202 21058284 -68446269 + C-rich Low_complexity Low_complexity 6 87 0 180 138 0 0 chr17 21058574 21058603 -68445950 + MIR SINE MIR 224 252 -10 593 154 0 77 chr17 21060578 21060773 -68443780 + CT-rich Low_complexity Low_complexity 1 180 0 258 262 213 25 chr17 21062216 21062338 -68442215 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 21062338 21062360 -68442193 + AT_rich Low_complexity Low_complexity 1 22 0 1885 128 0 4 chr17 21063106 21063379 -68441174 + AluSq SINE Alu 42 313 0 5067 205 25 3 chr17 21063379 21064579 -68439974 + L1PB3 LINE L1 4163 5388 -758 2564 158 12 79 chr17 21064584 21064758 -68439795 + L1PB3 LINE L1 5611 5795 -359 2162 101 4 4 chr17 21064758 21065036 -68439517 + AluSg SINE Alu 1 278 -32 2564 158 12 79 chr17 21065036 21065442 -68439111 + L1PB3 LINE L1 5795 6152 -2 1199 102 0 0 chr17 21065452 21065599 -68438954 + AluSq/x SINE Alu 1 147 -165 187 320 203 36 chr17 21065856 21066162 -68438391 + L3 LINE CR1 243 599 -978 648 195 0 0 chr17 21066163 21066286 -68438267 + FLAM_A SINE Alu 4 126 -7 183 340 75 11 chr17 21066401 21066495 -68438058 + L3 LINE CR1 794 893 -684 192 356 0 0 chr17 21067164 21067223 -68437330 - L2 LINE L2 -9 3304 3246 193 203 47 16 chr17 21067312 21067376 -68437177 - L2 LINE L2 -1018 2296 2231 544 236 158 20 chr17 21067864 21068118 -68436435 + L2 LINE L2 3025 3313 0 38 0 0 0 chr17 21119102 21119140 -68385413 + AT_rich Low_complexity Low_complexity 1 38 0 785 150 65 39 chr17 21119147 21119300 -68385253 - FRAM SINE Alu -19 157 1 1841 110 4 0 chr17 21119539 21119785 -68384768 - AluSx SINE Alu -10 302 56 1842 161 17 3 chr17 21119998 21120290 -68384263 - AluSx SINE Alu -16 296 1 278 132 75 0 chr17 21121554 21121607 -68382946 + Alu SINE Alu 244 300 0 2163 83 0 38 chr17 21122178 21122491 -68382062 - AluSx SINE Alu -11 301 1 859 201 7 0 chr17 21122583 21122727 -68381826 + AluJo SINE Alu 4 148 -164 2349 32 0 76 chr17 21122829 21123144 -68381409 - AluY SINE Alu -20 291 1 1981 60 124 0 chr17 21123197 21123462 -68381091 - AluSq SINE Alu -10 303 6 1937 137 0 39 chr17 21123937 21124243 -68380310 - AluJb SINE Alu -12 300 7 183 129 0 0 chr17 21124325 21124356 -68380197 + (TC)n Simple_repeat Simple_repeat 1 31 0 238 222 0 0 chr17 21124464 21124518 -68380035 - L1MCa LINE L1 -3323 3103 3050 2105 117 50 0 chr17 21124526 21124824 -68379729 - AluSp SINE Alu 0 313 1 2326 97 3 0 chr17 21124872 21125170 -68379383 - AluSp SINE Alu -14 299 1 1273 255 102 20 chr17 21125177 21125484 -68379069 - L1MCa LINE L1 -3373 3053 2690 1678 126 42 27 chr17 21125484 21125746 -68378807 + AluJb SINE Alu 33 298 -14 1273 255 102 20 chr17 21125746 21125929 -68378624 - L1MCa LINE L1 -3736 2690 2523 266 0 29 0 chr17 21125933 21125967 -68378586 + (TTA)n Simple_repeat Simple_repeat 2 36 0 802 155 9 0 chr17 21125971 21126087 -68378466 - FLAM_C SINE Alu -25 118 2 1245 112 0 37 chr17 21126093 21126308 -68378245 - L1MCa LINE L1 -4175 2251 2045 1798 162 10 3 chr17 21126674 21126976 -68377577 + AluJb SINE Alu 1 304 -8 904 174 0 13 chr17 21126998 21127147 -68377406 + AluSq/x SINE Alu 1 147 -166 2363 93 0 10 chr17 21127254 21127566 -68376987 - AluSg SINE Alu -1 309 1 247 286 156 0 chr17 21127803 21127880 -68376673 + L2 LINE L2 3168 3256 -16 235 267 79 40 chr17 21128564 21128665 -68375888 + L3 LINE CR1 1080 1184 -393 24 0 0 0 chr17 21129473 21129497 -68375056 + AT_rich Low_complexity Low_complexity 1 24 0 3009 93 42 16 chr17 21130042 21130471 -68374082 + L1PB3 LINE L1 5713 6152 -2 1894 119 18 3 chr17 21130806 21131091 -68373462 - AluSp SINE Alu -22 291 3 1314 163 203 49 chr17 21131579 21131652 -68372901 + Tigger7 DNA MER2_type 1 61 -2426 2533 57 0 3 chr17 21131652 21131953 -68372600 - AluY SINE Alu -9 302 3 1314 163 203 49 chr17 21131953 21132185 -68372368 + Tigger7 DNA MER2_type 61 353 -2134 2225 106 3 0 chr17 21132322 21132615 -68371938 + AluSp SINE Alu 3 296 -17 2217 122 3 0 chr17 21132624 21132927 -68371626 + AluSx SINE Alu 1 304 -8 1125 92 0 13 chr17 21132935 21133088 -68371465 + AluJb SINE Alu 1 151 -161 745 115 0 0 chr17 21134553 21134649 -68369904 - AluSg SINE Alu -213 97 2 2236 157 21 25 chr17 21134650 21134900 -68369653 - L1MB5 LINE L1 -314 5860 5611 2390 72 0 3 chr17 21134900 21135193 -68369360 - AluY SINE Alu 0 311 20 2236 157 21 25 chr17 21135193 21135375 -68369178 - L1MB5 LINE L1 -563 5611 5430 1324 212 86 3 chr17 21135416 21135854 -68368699 + L1MCa LINE L1 1851 2381 -4045 2599 61 0 0 chr17 21135854 21136164 -68368389 + AluY SINE Alu 1 310 -1 1324 212 86 3 chr17 21136164 21136213 -68368340 + L1MCa LINE L1 2381 2424 -4002 5202 206 40 28 chr17 21136233 21137260 -68367293 + L1M3 LINE L1 3951 4964 -1204 1737 170 50 0 chr17 21137260 21137384 -68367169 + AluJb SINE Alu 3 119 -193 405 0 0 0 chr17 21137384 21137429 -68367124 + (CA)n Simple_repeat Simple_repeat 2 46 0 1737 170 50 0 chr17 21137429 21137586 -68366967 + AluJb SINE Alu 119 298 -14 5202 206 40 28 chr17 21137586 21137897 -68366656 + L1M3 LINE L1 4964 5270 -898 2397 96 0 0 chr17 21137897 21138199 -68366354 + AluSx SINE Alu 1 302 -10 5202 206 40 28 chr17 21138199 21138457 -68366096 + L1M3 LINE L1 5270 5582 -586 206 302 0 19 chr17 21139803 21139856 -68364697 + L2 LINE L2 3002 3053 -219 2382 87 0 0 chr17 21140327 21140637 -68363916 + AluY SINE Alu 1 310 -1 892 141 7 21 chr17 21140654 21140796 -68363757 + FRAM SINE Alu 20 159 -17 2247 101 3 16 chr17 21140869 21141185 -68363368 + AluSx SINE Alu 1 312 0 375 266 210 8 chr17 21141223 21141347 -68363206 + MER5A DNA MER1_type 11 159 -30 1665 136 51 118 chr17 21141458 21141580 -68362973 + L1MB4 LINE L1 5759 5888 -292 1789 171 0 14 chr17 21141580 21141872 -68362681 + AluJb SINE Alu 6 293 -19 1665 136 51 118 chr17 21141872 21142199 -68362354 + L1MB4 LINE L1 5888 6178 -2 2690 7 3 3 chr17 21142199 21142493 -68362060 + AluYb8 SINE Alu 19 312 -6 4330 207 66 16 chr17 21142528 21144128 -68360425 + L1MC/D LINE L1 4005 5677 -667 1364 117 33 58 chr17 21144162 21144421 -68360132 - L1MB4 LINE L1 -34 6146 5892 423 213 21 0 chr17 21144922 21145016 -68359537 + L1M4 LINE L1 5357 5452 -726 1446 201 33 27 chr17 21145016 21145315 -68359238 + AluSx SINE Alu 1 301 -11 1262 114 0 0 chr17 21145448 21145615 -68358938 + AluSq SINE Alu 132 298 -15 259 32 0 0 chr17 21145936 21145967 -68358586 + (TTTA)n Simple_repeat Simple_repeat 3 136 0 2307 75 0 0 chr17 21145967 21146248 -68358305 - AluY SINE Alu -1 311 1 2112 84 0 11 chr17 21147582 21147903 -68356650 + AluY SINE Alu 1 318 0 2364 49 10 33 chr17 21148521 21148827 -68355726 + AluY SINE Alu 1 299 -12 1333 93 0 0 chr17 21149398 21149580 -68354973 - AluY SINE Alu -11 300 119 1745 102 0 51 chr17 21149686 21149961 -68354592 + AluSg SINE Alu 42 302 -8 741 151 0 17 chr17 21150207 21150326 -68354227 - FLAM_C SINE Alu -16 117 1 392 286 195 43 chr17 21150909 21151325 -68353228 - L2 LINE L2 -10 3303 2825 706 309 86 52 chr17 21151997 21152379 -68352174 + L1M4 LINE L1 3375 3769 -2377 618 26 0 0 chr17 21152379 21152455 -68352098 + (TCTCCC)n Simple_repeat Simple_repeat 1 76 0 5247 65 22 47 chr17 21152455 21153898 -68350655 + SVA Other Other 57 868 -520 1218 153 51 5 chr17 21154129 21154345 -68350208 + AluJo SINE Alu 1 226 -86 946 153 0 23 chr17 21154476 21154653 -68349900 + FRAM SINE Alu 1 172 -4 2107 101 3 26 chr17 21155579 21155887 -68348666 + AluSp SINE Alu 1 301 -12 1798 154 20 3 chr17 21155982 21156287 -68348266 + AluJo SINE Alu 3 312 0 225 244 0 128 chr17 21156364 21156450 -68348103 + LTR48 LTR ERV1 11 85 -702 867 220 63 29 chr17 21156509 21156860 -68347693 + LTR48B LTR ERV1 259 644 0 1846 171 0 3 chr17 21156927 21157226 -68347327 + AluJo SINE Alu 1 298 -14 346 248 26 59 chr17 21157237 21157390 -68347163 + HAL1 LINE L1 1428 1575 -932 804 190 0 0 chr17 21157393 21157530 -68347023 + AluJb SINE Alu 137 273 -39 198 0 0 0 chr17 21157545 21157567 -68346986 + (GGGA)n Simple_repeat Simple_repeat 4 25 0 1850 100 18 36 chr17 21157692 21157973 -68346580 + AluSx SINE Alu 1 276 -36 190 218 73 18 chr17 21157977 21158032 -68346521 - MIR SINE MIR -84 178 121 902 127 35 0 chr17 21158274 21158416 -68346137 - FRAM SINE Alu -19 157 11 2461 201 40 6 chr17 21159644 21160175 -68344378 + MER89 LTR ERV1 11 559 0 826 213 6 0 chr17 21160299 21160468 -68344085 - FRAM SINE Alu -6 170 1 214 224 30 45 chr17 21160728 21160795 -68343758 - MER5A DNA MER1_type -86 103 38 1651 137 18 0 chr17 21161053 21161330 -68343223 - AluSx SINE Alu -20 292 11 396 108 0 0 chr17 21161446 21161511 -68343042 + L1MA7 LINE L1 6223 6287 -4 323 163 71 20 chr17 21161527 21161625 -68342928 + Charlie5 DNA MER1_type 2428 2530 -82 22 0 0 0 chr17 21161779 21161801 -68342752 + AT_rich Low_complexity Low_complexity 1 22 0 2141 93 10 0 chr17 21163321 21163610 -68340943 + AluSx SINE Alu 1 292 -20 815 187 13 7 chr17 21163756 21163911 -68340642 - Tigger7 DNA MER2_type -10 2577 2422 423 0 0 0 chr17 21166618 21166665 -68337888 + (TG)n Simple_repeat Simple_repeat 2 48 0 208 50 0 50 chr17 21166719 21166759 -68337794 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 345 313 92 36 chr17 21166822 21167071 -68337482 + L2 LINE L2 2431 2693 -621 436 317 49 31 chr17 21167223 21167335 -68337218 + L2 LINE L2 2990 3099 -214 2091 116 7 0 chr17 21167335 21167637 -68336916 - AluSq SINE Alu -9 304 1 436 317 49 31 chr17 21167637 21167748 -68336805 + L2 LINE L2 3099 3217 -96 645 312 64 9 chr17 21167806 21168024 -68336529 - MIR SINE MIR -30 232 3 1867 125 0 11 chr17 21168493 21168773 -68335780 + AluJb SINE Alu 1 277 -35 2077 135 0 0 chr17 21169105 21169417 -68335136 + AluSx SINE Alu 1 312 0 2754 3 0 0 chr17 21170254 21170558 -68333995 - AluY SINE Alu -7 304 1 453 178 70 74 chr17 21170607 21170753 -68333800 + L1 LINE L1 5111 5274 -872 404 57 19 0 chr17 21170853 21170906 -68333647 - Alu SINE Alu -249 54 1 1399 183 5 46 chr17 21170906 21171273 -68333280 + L1M4 LINE L1 2866 3217 -2929 4046 172 23 63 chr17 21171604 21172604 -68331949 - LTR5 LTR ERVK -9 960 1 1425 151 0 4 chr17 21172963 21173195 -68331358 + AluJb SINE Alu 66 296 -16 458 148 20 40 chr17 21173200 21173271 -68331282 + AluS SINE Alu 2 73 -240 1360 161 119 75 chr17 21173271 21173700 -68330853 + LTR7 LTR ERV1 1 448 -2 1639 86 5 0 chr17 21173704 21173915 -68330638 + AluSp SINE Alu 70 284 -29 225 0 0 0 chr17 21173915 21173940 -68330613 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 458 148 20 40 chr17 21173950 21173974 -68330579 + AluS SINE Alu 76 100 -213 435 341 58 5 chr17 21174353 21174558 -68329995 - MIR SINE MIR -15 247 32 360 217 217 0 chr17 21174888 21175026 -68329527 - MER5A DNA MER1_type -18 171 4 317 234 191 14 chr17 21175041 21175182 -68329371 - MIR3 SINE MIR -10 198 33 535 128 0 23 chr17 21175680 21175766 -68328787 + HY4 scRNA scRNA 1 84 -9 440 256 67 18 chr17 21175772 21175955 -68328598 + L1M4 LINE L1 5188 5382 -801 579 268 76 40 chr17 21177243 21177545 -68327008 + L2 LINE L2 1935 2247 -1067 2653 103 98 14 chr17 21177604 21178023 -68326530 + MER4C LTR ERV1 12 465 0 2556 119 86 24 chr17 21178026 21178713 -68325840 + MER4C-int LTR ERV1 1 846 -5752 1848 134 3 16 chr17 21178750 21179055 -68325498 - AluJo SINE Alu -11 301 1 432 239 182 25 chr17 21179083 21179242 -68325311 + LTR50 LTR ERVL 18 201 -594 268 164 36 0 chr17 21179489 21179544 -68325009 + LTR33A LTR ERVL 459 515 -8 1018 288 118 26 chr17 21179599 21180141 -68324412 + L2 LINE L2 2715 3300 -13 198 0 0 0 chr17 21180141 21180163 -68324390 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2118 110 7 0 chr17 21180797 21181097 -68323456 - AluSg SINE Alu -8 302 1 449 291 110 50 chr17 21181770 21182107 -68322446 + L1M4c LINE L1 41 397 -5987 247 186 0 0 chr17 21182164 21182207 -68322346 + L1M4c LINE L1 554 596 -5684 674 232 39 24 chr17 21182218 21182425 -68322128 + L1M4c LINE L1 664 873 -5407 * 6325 199 53 52 chr17 21182399 21182442 -68322111 + L1M4 LINE L1 64 105 -6437 1610 171 0 33 chr17 21182442 21182741 -68321812 + AluJo SINE Alu 1 289 -23 6325 199 53 52 chr17 21182741 21183385 -68321168 + L1M4 LINE L1 105 747 -5795 2162 109 0 3 chr17 21183385 21183689 -68320864 + AluSx SINE Alu 1 303 -9 6325 199 53 52 chr17 21183689 21184109 -68320444 + L1M4 LINE L1 747 1165 -5377 1654 137 10 83 chr17 21184109 21184423 -68320130 - AluJo SINE Alu -21 291 1 6325 199 53 52 chr17 21184423 21184920 -68319633 + L1M4 LINE L1 1165 1672 -4870 726 313 156 30 chr17 21184920 21185617 -68318936 - L2 LINE L2 -1924 1390 606 703 315 250 18 chr17 21185618 21186326 -68318227 + L3 LINE CR1 664 1535 -42 3652 243 67 25 chr17 21186340 21187280 -68317273 - L1MEc LINE L1 -5041 1355 354 2203 101 3 0 chr17 21187280 21187576 -68316977 - AluSx SINE Alu -15 297 1 3652 243 67 25 chr17 21187576 21187812 -68316741 - L1MEc LINE L1 -6042 354 129 1212 171 63 0 chr17 21187812 21188034 -68316519 - AluJo SINE Alu -17 295 60 337 242 40 40 chr17 21188058 21188157 -68316396 + L1MC4 LINE L1 6604 6702 -1340 * 340 173 108 12 chr17 21188078 21188187 -68316366 - L1MC4 LINE L1 -1339 6983 1983 306 149 135 14 chr17 21188218 21188292 -68316261 - L1MC4 LINE L1 -4361 2065 1983 365 185 0 0 chr17 21188322 21188387 -68316166 - L1MEc LINE L1 -6278 118 54 1603 95 0 5 chr17 21188494 21188704 -68315849 + AluSx SINE Alu 1 209 -103 286 333 78 0 chr17 21189115 21189205 -68315348 + MIR3 SINE MIR 10 106 -102 250 197 82 49 chr17 21189424 21189485 -68315068 + MIR SINE MIR 175 237 -25 2072 110 3 22 chr17 21189941 21190259 -68314294 + AluSx SINE Alu 1 312 0 1288 246 113 75 chr17 21191006 21192020 -68312533 + HAL1 LINE L1 818 1870 -637 1231 322 0 81 chr17 21192047 21192370 -68312183 - AluSx SINE Alu -15 297 1 2309 197 71 27 chr17 21192490 21192805 -68311748 + L1M4 LINE L1 4107 4407 -1739 2051 80 0 0 chr17 21192805 21193099 -68311454 + AluY SINE Alu 36 311 0 2309 197 71 27 chr17 21193099 21193373 -68311180 + L1M4 LINE L1 4407 4722 -1424 283 292 109 7 chr17 21193377 21193514 -68311039 + L1MEc LINE L1 1524 1674 -4722 23 0 0 0 chr17 21193619 21193642 -68310911 + AT_rich Low_complexity Low_complexity 1 23 0 2256 52 0 17 chr17 21193848 21194164 -68310389 - AluY SINE Alu 0 311 1 2468 40 0 0 chr17 21194257 21194553 -68310000 - AluY SINE Alu -15 296 1 397 290 70 65 chr17 21194798 21195012 -68309541 - L1ME4a LINE L1 -228 5893 5679 469 233 165 46 chr17 21195046 21195335 -68309218 - L1ME4a LINE L1 -770 5376 5165 1970 78 67 7 chr17 21195446 21195728 -68308825 - AluSc SINE Alu -10 299 1 600 246 73 45 chr17 21196107 21196327 -68308226 - MIR SINE MIR -23 239 14 2311 87 0 7 chr17 21196839 21197125 -68307428 + AluSx SINE Alu 1 308 0 196 42 0 0 chr17 21197125 21197149 -68307404 + (CAA)n Simple_repeat Simple_repeat 2 180 0 649 143 10 38 chr17 21197150 21197298 -68307255 + L1M LINE L1 5274 5420 -758 180 304 58 14 chr17 21198189 21198258 -68306295 + L2 LINE L2 3193 3264 -8 2535 72 0 0 chr17 21199774 21200078 -68304475 - AluY SINE Alu -7 304 1 990 166 0 18 chr17 21200436 21200599 -68303954 - FRAM SINE Alu -16 160 1 2388 80 0 7 chr17 21201115 21201448 -68303105 - AluSq SINE Alu 0 331 1 2295 108 0 9 chr17 21202543 21202858 -68301695 - AluSx SINE Alu 0 312 1 619 152 0 0 chr17 21202907 21203012 -68301541 + FLAM_A SINE Alu 21 125 -17 1632 168 47 26 chr17 21203028 21203367 -68301186 - MER47A DNA MER2_type -1 365 20 2265 119 3 0 chr17 21203853 21204155 -68300398 + AluSx SINE Alu 1 303 -9 404 278 247 0 chr17 21204220 21204414 -68300139 - MIR SINE MIR 0 262 21 2085 137 7 0 chr17 21204893 21205185 -68299368 + AluSx SINE Alu 1 294 -18 706 191 34 0 chr17 21205196 21205343 -68299210 + L1MA5A LINE L1 5991 6142 -155 1423 141 0 75 chr17 21205349 21205409 -68299144 + AluJo SINE Alu 87 150 -162 2239 99 39 0 chr17 21205409 21205692 -68298861 + AluSx SINE Alu 1 294 -18 1423 141 0 75 chr17 21205692 21205872 -68298681 + AluJo SINE Alu 150 309 -3 263 79 0 0 chr17 21205872 21205910 -68298643 + L1MA5A LINE L1 6144 6181 -116 1030 78 8 0 chr17 21206501 21206629 -68297924 - AluSq SINE Alu -84 229 101 1658 127 0 28 chr17 21206822 21207074 -68297479 + AluSg/x SINE Alu 68 312 0 2369 95 0 13 chr17 21209162 21209478 -68295075 - AluSx SINE Alu 0 312 1 2106 104 3 3 chr17 21209485 21209774 -68294779 - AluJo SINE Alu -21 291 3 232 248 0 48 chr17 21210190 21210315 -68294238 + G-rich Low_complexity Low_complexity 5 123 0 2182 120 3 10 chr17 21211176 21211475 -68293078 - AluSx SINE Alu -15 297 1 2660 53 0 0 chr17 21212093 21212394 -68292159 - AluY SINE Alu -10 301 1 2182 110 0 17 chr17 21212480 21212781 -68291772 - AluSx SINE Alu -16 296 1 2153 96 57 0 chr17 21212848 21213128 -68291425 - AluSx SINE Alu -1 311 16 453 131 24 12 chr17 21213128 21213212 -68291341 - LTR65 LTR ERV1 -421 248 164 1037 141 0 76 chr17 21213888 21213923 -68290630 - AluJo/FRAM SINE Alu -6 306 270 2355 107 0 3 chr17 21213923 21214232 -68290321 + AluSx SINE Alu 1 308 -4 1037 141 0 76 chr17 21214232 21214380 -68290173 - AluJo/FRAM SINE Alu -42 270 137 928 261 36 16 chr17 21214463 21214712 -68289841 + MIR SINE MIR 9 262 0 1674 168 13 69 chr17 21214911 21215012 -68289541 + L1MC4 LINE L1 7281 7386 -656 1596 176 79 3 chr17 21215012 21215302 -68289251 + AluJo SINE Alu 1 312 0 1674 168 13 69 chr17 21215302 21215576 -68288977 + L1MC4 LINE L1 7386 7635 -407 191 247 26 78 chr17 21216071 21216148 -68288405 - MIR SINE MIR -108 154 82 254 263 72 50 chr17 21216194 21216456 -68288097 + L1ME LINE L1 5632 5899 -222 755 196 98 5 chr17 21216764 21216897 -68287656 - L1MB2 LINE L1 -339 5832 5676 2364 94 7 0 chr17 21216897 21217196 -68287357 + AluSq SINE Alu 1 301 -12 755 196 98 5 chr17 21217196 21217246 -68287307 - L1MB2 LINE L1 -495 5676 5632 2209 227 61 37 chr17 21219092 21219743 -68284810 + LTR65 LTR ERV1 3 669 0 2444 92 13 0 chr17 21219914 21220219 -68284334 + AluSx SINE Alu 1 309 -3 844 142 0 24 chr17 21221410 21221537 -68283016 + AluJo SINE Alu 1 124 -188 1535 171 111 14 chr17 21222749 21223099 -68281454 + MLT1B LTR MaLR 7 390 0 1811 184 3 0 chr17 21223138 21223431 -68281122 + AluJb SINE Alu 1 294 -18 1294 163 10 0 chr17 21223432 21223641 -68280912 + AluJo SINE Alu 100 310 -2 2091 126 10 0 chr17 21224259 21224552 -68280001 + AluSg SINE Alu 1 296 -14 728 175 129 29 chr17 21224644 21224815 -68279738 - MER20 DNA MER1_type 0 219 32 655 203 11 39 chr17 21224867 21224966 -68279587 + MER5B DNA MER1_type 1 94 -84 2001 121 48 3 chr17 21224966 21225256 -68279297 + AluSx SINE Alu 1 303 -9 655 203 11 39 chr17 21225256 21225338 -68279215 + MER5B DNA MER1_type 94 177 -1 1362 102 0 0 chr17 21225860 21226036 -68278517 + AluSg/x SINE Alu 134 309 -3 200 281 124 50 chr17 21226095 21226216 -68278337 + MER5B DNA MER1_type 4 133 -45 665 96 0 0 chr17 21226309 21226403 -68278150 + AluY SINE Alu 207 300 -11 1832 168 28 0 chr17 21226407 21226693 -68277860 + AluJo SINE Alu 1 294 -18 511 261 30 42 chr17 21226721 21226886 -68277667 - MER63 DNA MER1_type -273 789 1 361 164 14 14 chr17 21226886 21226959 -68277594 + MER5A DNA MER1_type 115 187 -2 1947 148 42 42 chr17 21227096 21227141 -68277412 + LTR26B LTR ERV1 154 198 -333 1858 174 7 3 chr17 21227141 21227434 -68277119 + AluJb SINE Alu 1 294 -18 2344 92 3 0 chr17 21227439 21227731 -68276822 + AluSg SINE Alu 1 293 -17 1947 148 42 42 chr17 21227731 21228057 -68276496 + LTR26B LTR ERV1 201 531 0 2050 124 37 3 chr17 21228689 21228987 -68275566 + AluSg SINE Alu 2 309 -1 2450 97 0 0 chr17 21229522 21229830 -68274723 + AluSx SINE Alu 1 308 -4 2182 120 0 0 chr17 21229840 21230162 -68274391 + AluSx SINE Alu 1 322 0 376 236 22 0 chr17 21230170 21230259 -68274294 + MLT1D LTR MaLR 1 91 -414 634 202 16 0 chr17 21230269 21230398 -68274155 + MLT1D LTR MaLR 375 505 0 2433 88 0 0 chr17 21230792 21231086 -68273467 - AluSg SINE Alu -16 294 1 273 29 0 0 chr17 21232053 21232087 -68272466 + (TG)n Simple_repeat Simple_repeat 2 35 0 2266 102 0 7 chr17 21233146 21233440 -68271113 + AluSx SINE Alu 1 292 -20 1451 149 112 22 chr17 21233722 21233991 -68270562 + AluJo SINE Alu 1 293 -19 234 284 23 11 chr17 21234185 21234273 -68270280 - MIR3 SINE MIR -27 181 93 1723 244 47 2 chr17 21234406 21234808 -68269745 + Tigger5 DNA MER2_type 20 439 -1884 263 119 269 15 chr17 21234815 21234882 -68269671 + Tigger5 DNA MER2_type 2240 2323 0 347 60 20 0 chr17 21236650 21236700 -68267853 + (TTA)n Simple_repeat Simple_repeat 1 51 0 1342 136 148 4 chr17 21236711 21236988 -68267565 + AluJo SINE Alu 1 313 0 268 216 26 121 chr17 21237003 21237119 -68267434 - MIR SINE MIR -79 183 79 2070 66 0 52 chr17 21237201 21237472 -68267081 - AluSc SINE Alu -52 257 1 2313 118 0 0 chr17 21237480 21237784 -68266769 - AluSx SINE Alu -8 304 1 34 55 0 0 chr17 21239114 21239169 -68265384 + GC_rich Low_complexity Low_complexity 1 55 0 180 239 22 0 chr17 21239704 21239750 -68264803 + MIR SINE MIR 94 140 -68 2318 68 34 0 chr17 21240005 21240301 -68264252 + AluSc SINE Alu 1 306 -3 531 338 66 33 chr17 21240784 21240912 -68263641 + L1M4 LINE L1 4099 4221 -1925 875 118 0 8 chr17 21240912 21241039 -68263514 + FLAM_C SINE Alu 1 126 -7 531 338 66 33 chr17 21241039 21241212 -68263341 + L1M4 LINE L1 4221 4410 -1736 408 173 0 0 chr17 21241227 21241298 -68263255 + L1MC3 LINE L1 7121 7406 -589 941 193 0 0 chr17 21241515 21241681 -68262872 + FRAM SINE Alu 1 40 0 199 182 23 0 chr17 21241813 21241857 -68262696 - L2 LINE L2 -1996 1318 1274 508 286 31 90 chr17 21241909 21241968 -68262585 - L1M4 LINE L1 -2173 3973 3912 1814 146 0 67 chr17 21241968 21242148 -68262405 - AluJb SINE Alu -13 299 147 2166 109 26 26 chr17 21242148 21242460 -68262093 - AluSp SINE Alu -1 312 1 1814 146 0 67 chr17 21242460 21242595 -68261958 - AluJb SINE Alu -165 147 5 508 286 31 90 chr17 21242595 21242790 -68261763 - L1M4 LINE L1 -2234 3912 3734 948 128 0 7 chr17 21242790 21242931 -68261622 - FLAM_C SINE Alu -3 140 1 25 31 0 0 chr17 21243042 21243074 -68261479 + AT_rich Low_complexity Low_complexity 1 32 0 1990 190 103 5 chr17 21243168 21243615 -68260938 - MLT1D LTR MaLR -14 491 1 2410 77 0 32 chr17 21243823 21244134 -68260419 - AluSx SINE Alu -11 301 1 2271 108 17 0 chr17 21244144 21244440 -68260113 - AluSx SINE Alu -11 301 1 2336 99 17 0 chr17 21244449 21244751 -68259802 - AluSg SINE Alu -3 307 1 260 289 0 44 chr17 21244822 21244912 -68259641 + MLT1L LTR MaLR 143 228 -387 238 167 0 0 chr17 21244914 21244959 -68259594 - Alu SINE Alu -171 131 87 1897 137 10 7 chr17 21245087 21245379 -68259174 - AluJb SINE Alu -17 295 3 1851 130 3 29 chr17 21345863 21346171 -68158382 - AluY SINE Alu -11 300 1 335 312 39 13 chr17 21346529 21346683 -68157870 - L2 LINE L2 -215 3057 2900 259 254 176 28 chr17 21347021 21347163 -68157390 + MER5A DNA MER1_type 21 183 -6 192 300 122 33 chr17 21347761 21347851 -68156702 - L2 LINE L2 -1 3271 3174 1110 227 8 12 chr17 21348039 21348286 -68156267 + AluJo SINE Alu 45 290 -22 199 208 0 75 chr17 21348354 21348407 -68156146 - MER5B DNA MER1_type -129 49 1 437 33 0 17 chr17 21348434 21348494 -68156059 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 2213 105 3 3 chr17 21349357 21349651 -68154902 - AluSx SINE Alu -4 308 15 270 106 64 0 chr17 21349692 21349739 -68154814 + CT-rich Low_complexity Low_complexity 5 54 0 1846 162 13 7 chr17 21349765 21350068 -68154485 - AluSx SINE Alu 0 312 8 1824 135 69 3 chr17 21350229 21350518 -68154035 + AluJb SINE Alu 1 308 -4 181 188 0 0 chr17 21351665 21351697 -68152856 - L2 LINE L2 -1 3312 3281 650 88 15 118 chr17 21351974 21352110 -68152443 - L1MB7 LINE L1 -34 6150 6029 1651 153 76 109 chr17 21352112 21352519 -68152034 - MER4B LTR ERV1 0 872 453 198 71 0 0 chr17 21352519 21352547 -68152006 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 1612 95 36 98 chr17 21352551 21352856 -68151697 - AluSx SINE Alu -26 286 1 1651 153 76 109 chr17 21352856 21353109 -68151444 - MER4B LTR ERV1 -422 450 1 2929 140 84 54 chr17 21353109 21353597 -68150956 - L1MB7 LINE L1 -161 6023 5551 1894 137 58 0 chr17 21353597 21353875 -68150678 - AluSx SINE Alu -18 294 1 2929 140 84 54 chr17 21353875 21354045 -68150508 - L1MB7 LINE L1 -633 5551 5338 1758 197 7 0 chr17 21354045 21354335 -68150218 - AluSx SINE Alu -12 300 9 2929 140 84 54 chr17 21354335 21354411 -68150142 - L1MB7 LINE L1 -846 5338 5266 1118 215 73 15 chr17 21354549 21354849 -68149704 + L1MB5 LINE L1 5825 6132 -51 1635 167 3 38 chr17 21354849 21355142 -68149411 + AluJb SINE Alu 1 283 -29 1118 215 73 15 chr17 21355142 21355197 -68149356 + L1MB5 LINE L1 6132 6182 -1 328 190 150 10 chr17 21355268 21355368 -68149185 + L1MC5 LINE L1 7691 7804 -157 1785 171 6 19 chr17 21355709 21356071 -68148482 + MER46B DNA MER2_type 5 236 0 1398 204 0 0 chr17 21356120 21356370 -68148183 + AluSx SINE Alu 3 252 -60 228 282 42 14 chr17 21356628 21356699 -68147854 + L2 LINE L2 3194 3266 -6 443 324 29 0 chr17 21357171 21357344 -68147209 - Charlie8 DNA MER1_type -2160 257 80 1593 194 74 62 chr17 21357353 21357459 -68147094 + MLT1D LTR MaLR 13 116 -389 2152 103 0 13 chr17 21357459 21357760 -68146793 + AluSx SINE Alu 1 297 -15 1593 194 74 62 chr17 21357760 21358138 -68146415 + MLT1D LTR MaLR 116 503 -2 182 262 0 0 chr17 21358249 21358291 -68146262 + L2 LINE L2 3199 3240 -32 309 301 81 7 chr17 21358859 21358995 -68145558 + L2 LINE L2 2917 3062 -210 249 109 0 0 chr17 21359499 21359545 -68145008 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 189 226 0 75 chr17 21359572 21359625 -68144928 + MER5B DNA MER1_type 1 49 -129 21 0 0 0 chr17 21359625 21359646 -68144907 + AT_rich Low_complexity Low_complexity 1 21 0 1627 181 7 11 chr17 21359693 21359974 -68144579 - AluJo SINE Alu -22 290 11 2551 71 0 3 chr17 21359991 21360299 -68144254 - AluY SINE Alu -4 307 1 233 268 0 152 chr17 21360307 21360368 -68144185 - MER5B DNA MER1_type -83 95 57 750 187 0 8 chr17 21360368 21360502 -68144051 + FLAM_A SINE Alu 1 133 0 233 268 0 152 chr17 21360502 21360552 -68144001 - MER5B DNA MER1_type -121 57 1 2081 118 10 10 chr17 21361590 21361886 -68142667 - AluSx SINE Alu -16 296 1 376 235 17 61 chr17 21362350 21362465 -68142088 + MIR3 SINE MIR 94 203 -5 2593 66 0 0 chr17 21363384 21363687 -68140866 - AluY SINE Alu -8 303 1 227 232 61 71 chr17 21364114 21364213 -68140340 + L2 LINE L2 3144 3241 -31 273 269 81 47 chr17 21364816 21365050 -68139503 - L1MC4a LINE L1 -1761 6047 5806 1051 266 55 2 chr17 21365342 21365683 -68138870 - L1MC4a LINE L1 -2181 5627 5260 403 294 68 0 chr17 21365927 21366073 -68138480 - MLT1I LTR MaLR -8 401 246 201 74 0 0 chr17 21366084 21366111 -68138442 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1866 155 3 3 chr17 21366123 21366413 -68138140 + AluSx SINE Alu 1 290 -22 2204 87 3 17 chr17 21366415 21366727 -68137826 + AluSp SINE Alu 1 308 0 505 115 29 29 chr17 21366771 21366875 -68137678 - L1MB8 LINE L1 -100 6078 5975 1859 210 47 5 chr17 21366888 21367316 -68137237 - L1MB7 LINE L1 -104 6080 5635 325 303 115 0 chr17 21367390 21367512 -68137041 - MLT1I LTR MaLR -256 153 18 253 268 0 37 chr17 21368433 21368515 -68136038 - MER5A DNA MER1_type -110 79 1 312 316 147 46 chr17 21369559 21369885 -68134668 - MLT1K LTR MaLR -90 498 140 1376 151 6 114 chr17 21370413 21370737 -68133816 - AluJb SINE Alu -23 289 1 2063 137 3 13 chr17 21371346 21371659 -68132894 + AluSq SINE Alu 3 312 -1 1260 124 19 29 chr17 21372028 21372237 -68132316 + AluY SINE Alu 7 213 -98 439 217 48 85 chr17 21372724 21372797 -68131756 + MER5A DNA MER1_type 5 79 -110 2051 122 6 51 chr17 21372797 21372942 -68131611 + AluSx SINE Alu 2 127 -185 2321 68 19 10 chr17 21372942 21373250 -68131303 + AluY SINE Alu 1 311 0 2051 122 6 51 chr17 21373250 21373416 -68131137 + AluSx SINE Alu 127 299 -13 439 217 48 85 chr17 21373416 21373531 -68131022 + MER5A DNA MER1_type 79 186 -3 192 257 100 0 chr17 21373559 21373629 -68130924 - MIR3 SINE MIR -54 154 78 1801 142 62 17 chr17 21374205 21374493 -68130060 - AluSx SINE Alu -11 301 1 243 262 177 14 chr17 21374745 21374868 -68129685 + MIR SINE MIR 15 150 -68 2411 79 0 16 chr17 21375049 21375354 -68129199 - AluSc SINE Alu -8 301 2 379 198 0 25 chr17 21375585 21375666 -68128887 + MIR SINE MIR 71 149 -113 229 323 104 0 chr17 21375780 21375876 -68128677 - L2 LINE L2 -13 3259 3154 2125 106 3 23 chr17 21376114 21376415 -68128138 + AluSx SINE Alu 1 295 -17 2379 65 13 20 chr17 21377220 21377526 -68127027 + AluSx SINE Alu 1 304 -8 412 204 31 10 chr17 21377996 21378094 -68126459 + MIR SINE MIR 37 136 -72 917 159 0 55 chr17 21379916 21380079 -68124474 - FRAM SINE Alu -21 155 2 311 358 8 23 chr17 21380238 21380449 -68124104 + L1ME3A LINE L1 5701 5910 -252 747 296 10 5 chr17 21381569 21381775 -68122778 + MIR SINE MIR 8 214 -48 207 175 0 0 chr17 21382655 21382695 -68121858 - MIR SINE MIR -14 248 209 299 180 105 22 chr17 21385576 21385678 -68118875 + MIR SINE MIR 34 153 -61 200 306 5 48 chr17 21385775 21385961 -68118592 + (CA)n Simple_repeat Simple_repeat 2 179 0 238 231 231 0 chr17 21386869 21386977 -68117576 + L2 LINE L2 2673 2805 -509 509 92 11 46 chr17 21387340 21387427 -68117126 - MER53 DNA DNA 0 189 106 438 138 11 46 chr17 21387352 21387439 -68117114 + MER53 DNA DNA 23 106 -83 * 237 111 0 0 chr17 21387438 21387474 -68117079 - MER53 DNA DNA -153 36 1 * 668 200 17 74 chr17 21387633 21387808 -68116745 + MER63B DNA MER1_type 1 165 -271 416 294 44 44 chr17 21387828 21388056 -68116497 + L2 LINE L2 2911 3138 -175 1292 155 28 40 chr17 21388228 21388479 -68116074 - AluJo SINE Alu -64 248 1 412 215 48 39 chr17 21388616 21388751 -68115802 - MIR SINE MIR -62 146 38 289 360 27 0 chr17 21388883 21389033 -68115520 - MIR3 SINE MIR -42 166 13 243 329 38 44 chr17 21389322 21389480 -68115073 - L2 LINE L2 -174 3098 2942 251 168 11 116 chr17 21389480 21389541 -68115012 + L1MB5 LINE L1 6081 6130 -44 2408 82 0 7 chr17 21389541 21389845 -68114708 + AluSq SINE Alu 1 302 -11 251 168 11 116 chr17 21389845 21389878 -68114675 + L1MB5 LINE L1 6130 6165 -9 1128 180 57 2 chr17 21389918 21390267 -68114286 + LTR47A LTR ERVL 1 444 -8 417 244 67 32 chr17 21390504 21390654 -68113899 + MIR SINE MIR 28 153 -55 223 300 22 11 chr17 21390952 21391042 -68113511 + L3 LINE CR1 1392 1482 -95 254 318 45 8 chr17 21391088 21391220 -68113333 - L2 LINE L2 -222 3050 2914 367 136 252 19 chr17 21391337 21391440 -68113113 - MIR SINE MIR -55 207 81 1046 166 4 31 chr17 21391771 21392000 -68112553 + L1MC1 LINE L1 5815 6037 -296 377 253 157 11 chr17 21392006 21392184 -68112369 + HAL1 LINE L1 1197 1400 -1107 2122 116 0 0 chr17 21392873 21393141 -68111412 - AluSg SINE Alu -40 270 3 281 268 160 28 chr17 21393172 21393385 -68111168 + MLT1L LTR MaLR 348 588 -27 1693 186 13 31 chr17 21393391 21393709 -68110844 - AluJb SINE Alu 0 312 1 2234 129 0 3 chr17 21393723 21394033 -68110520 - AluSc SINE Alu 0 309 1 650 211 144 39 chr17 21394066 21394274 -68110279 - MLT1K LTR MaLR -70 518 289 1222 101 24 24 chr17 21394276 21394445 -68110108 - AluSp SINE Alu -11 302 134 2340 95 3 3 chr17 21394446 21394740 -68109813 - AluSq SINE Alu -19 294 1 485 212 38 53 chr17 21394743 21394875 -68109678 - MLT1K LTR MaLR -296 292 163 1576 157 56 22 chr17 21394944 21395212 -68109341 + AluJb SINE Alu 6 282 -30 249 33 0 0 chr17 21395217 21395247 -68109306 + (CA)n Simple_repeat Simple_repeat 1 30 0 957 108 8 0 chr17 21395250 21395379 -68109174 + AluSq/x SINE Alu 1 130 -183 2132 116 13 17 chr17 21395380 21395517 -68109036 + AluSq SINE Alu 1 137 -176 1914 119 45 14 chr17 21395517 21395827 -68108726 + AluSx SINE Alu 1 312 0 2132 116 13 17 chr17 21395827 21395991 -68108562 + AluSq SINE Alu 137 301 -12 585 249 96 11 chr17 21395997 21396174 -68108379 + MIR SINE MIR 31 222 -40 334 274 29 0 chr17 21396515 21396617 -68107936 - MIR SINE MIR -88 174 70 239 264 69 0 chr17 21397105 21397177 -68107376 + MIR SINE MIR 116 192 -70 183 309 18 0 chr17 21397492 21397564 -68106989 + MIR SINE MIR 92 143 -65 2352 109 0 0 chr17 21397565 21397867 -68106686 + AluSg SINE Alu 2 303 -7 1069 216 5 10 chr17 21397903 21398111 -68106442 - MER3 DNA MER1_type -2 207 1 524 247 16 6 chr17 21398520 21398702 -68105851 + L1 LINE L1 3239 3422 -2724 381 248 28 28 chr17 21398746 21398855 -68105698 - MIR3 SINE MIR -34 174 66 183 245 0 41 chr17 21399090 21399139 -68105414 + L2 LINE L2 3240 3286 -27 365 229 150 20 chr17 21399254 21399407 -68105146 - L1ME3A LINE L1 0 6170 5998 21 89 0 0 chr17 21399771 21399827 -68104726 + GC_rich Low_complexity Low_complexity 1 56 0 611 256 26 42 chr17 21399897 21400088 -68104465 - AluJo SINE Alu -124 188 1 747 159 80 0 chr17 21400088 21400251 -68104302 - L1ME3A LINE L1 -586 5758 5583 325 111 42 0 chr17 21400251 21400323 -68104230 - MLT1B LTR MaLR -8 382 308 883 98 0 23 chr17 21400324 21400457 -68104096 + AluSq/x SINE Alu 1 130 -183 1492 128 22 25 chr17 21400458 21400732 -68103821 + AluSx SINE Alu 1 273 -39 1979 14 0 0 chr17 21401022 21401239 -68103314 - U3 snRNA snRNA 0 217 1 1253 156 12 132 chr17 21401520 21401847 -68102706 + AluJo SINE Alu 3 290 -12 1885 146 30 35 chr17 21401851 21402221 -68102332 - L1MB4 LINE L1 0 6180 5813 1495 156 0 23 chr17 21402221 21402484 -68102069 - AluJb SINE Alu -54 258 2 1507 250 65 48 chr17 21402485 21402540 -68102013 - L1M4 LINE L1 -1770 4376 4323 1986 112 20 0 chr17 21402540 21402835 -68101718 + AluSq SINE Alu 1 301 -12 1507 250 65 48 chr17 21402835 21403031 -68101522 - L1M4 LINE L1 -1823 4323 4132 2155 114 0 16 chr17 21403031 21403346 -68101207 + AluSg SINE Alu 1 310 0 1507 250 65 48 chr17 21403346 21403658 -68100895 - L1M4 LINE L1 -2014 4132 3802 773 142 0 0 chr17 21403658 21403785 -68100768 + LOR1a LTR ERV1 371 497 0 247 208 0 0 chr17 21403846 21403894 -68100659 + MLT1B LTR MaLR 278 325 -65 2067 124 7 0 chr17 21403894 21404184 -68100369 - AluSx SINE Alu -20 292 1 428 95 0 0 chr17 21404188 21404251 -68100302 - AluSp/q SINE Alu -7 306 244 606 148 52 0 chr17 21404253 21404368 -68100185 + L1MC/D LINE L1 5638 5758 -586 675 208 8 0 chr17 21404369 21404494 -68100059 + FLAM_A SINE Alu 1 126 -7 2088 113 0 19 chr17 21404503 21404822 -68099731 + AluSq SINE Alu 1 313 0 2061 131 30 0 chr17 21404826 21405124 -68099429 + AluSc SINE Alu 1 307 -2 1132 235 67 28 chr17 21405151 21405494 -68099059 + L1MCa LINE L1 2308 2690 -3736 1803 143 30 10 chr17 21405494 21405795 -68098758 + AluSx SINE Alu 1 307 -5 1132 235 67 28 chr17 21405795 21406076 -68098477 + L1MCa LINE L1 2690 2959 -3467 800 164 0 0 chr17 21406116 21406244 -68098309 - AluJo SINE Alu -55 257 130 2332 89 0 16 chr17 21406253 21406569 -68097984 - AluY SINE Alu 0 311 1 818 125 0 0 chr17 21406636 21406748 -68097805 - AluJo SINE Alu -187 125 14 2330 75 3 0 chr17 21406778 21407072 -68097481 - AluSp SINE Alu -18 295 1 2184 95 0 7 chr17 21407088 21407384 -68097169 - AluSc SINE Alu -15 294 1 2262 94 0 16 chr17 21407695 21408003 -68096550 - AluSx SINE Alu -9 303 1 1086 190 29 33 chr17 21408250 21408673 -68095880 - L1M4 LINE L1 -713 6282 5854 873 240 0 0 chr17 21408698 21408898 -68095655 - AluJb SINE Alu 0 312 113 250 246 0 0 chr17 21408898 21408967 -68095586 - L1M4 LINE L1 -1459 5498 5430 * 3784 236 48 92 chr17 21408943 21408999 -68095554 - L1M4 LINE L1 -5187 1672 1615 1674 79 169 8 chr17 21408999 21409265 -68095288 - AluSg1 SINE Alu 0 309 1 3784 236 48 92 chr17 21409265 21409306 -68095247 - L1M4 LINE L1 -5244 1615 1574 2135 102 0 46 chr17 21409306 21409629 -68094924 - AluSg SINE Alu -1 309 2 3784 236 48 92 chr17 21409629 21410171 -68094382 - L1M4 LINE L1 -5285 1574 1010 2258 95 0 25 chr17 21410171 21410488 -68094065 - AluSg1 SINE Alu 0 309 1 3784 236 48 92 chr17 21410488 21410784 -68093769 - L1M4 LINE L1 -5849 1010 703 1935 72 4 4 chr17 21410784 21411035 -68093518 + AluSq SINE Alu 1 251 -62 3784 236 48 92 chr17 21411035 21411749 -68092804 - L1M4 LINE L1 -6156 703 137 1624 176 7 29 chr17 21411750 21412056 -68092497 - AluJo SINE Alu -13 299 1 1232 144 51 0 chr17 21412076 21412271 -68092282 - AluSg/x SINE Alu 0 312 108 585 138 0 0 chr17 21412271 21412351 -68092202 + AluSp/q SINE Alu 211 290 -23 494 231 41 0 chr17 21412502 21412623 -68091930 - MLT1D LTR MaLR -379 126 1 1457 133 78 0 chr17 21412731 21413001 -68091552 + MER4B LTR ERV1 3 293 -317 2245 91 0 49 chr17 21413001 21413194 -68091359 - AluSq SINE Alu 0 313 141 2258 94 3 0 chr17 21413194 21413482 -68091071 - AluSq SINE Alu -24 289 1 2245 91 0 49 chr17 21413482 21413617 -68090936 - AluSq SINE Alu -172 141 1 255 242 158 21 chr17 21413882 21413977 -68090576 + MIR SINE MIR 9 116 -146 803 117 0 0 chr17 21414390 21414501 -68090052 - AluSg/x SINE Alu -13 299 189 905 183 15 0 chr17 21414502 21414699 -68089854 + L1MC4 LINE L1 6885 7084 -958 477 263 49 49 chr17 21414715 21414958 -68089595 - L1MC4a LINE L1 -1213 6595 6353 552 92 0 0 chr17 21414959 21415035 -68089518 - AluSx SINE Alu -5 306 231 1027 136 0 12 chr17 21415035 21415197 -68089356 + AluJb SINE Alu 50 209 -103 1691 115 0 4 chr17 21415204 21415439 -68089114 - AluSx SINE Alu -78 234 1 334 349 47 8 chr17 21415495 21415624 -68088929 - L2 LINE L2 -233 3039 2906 532 269 15 13 chr17 21416389 21416542 -68088011 + MIR SINE MIR 48 199 -44 202 200 0 25 chr17 21416609 21416689 -68087864 + GA-rich Low_complexity Low_complexity 1 78 0 281 270 27 0 chr17 21416995 21417069 -68087484 + MIR3 SINE MIR 89 164 -44 270 236 0 0 chr17 21417211 21417266 -68087287 - MIR SINE MIR -115 147 93 213 357 54 0 chr17 21418154 21418266 -68086287 + L2 LINE L2 2571 2688 -626 963 278 99 50 chr17 21418293 21418736 -68085817 + L2 LINE L2 2839 3303 -10 1956 65 0 4 chr17 21418954 21419200 -68085353 + AluSc SINE Alu 65 309 0 2089 107 3 13 chr17 21419498 21419798 -68084755 - AluSx SINE Alu -15 297 1 300 296 78 0 chr17 21420294 21420409 -68084144 + MIR SINE MIR 63 186 -76 21 0 0 0 chr17 21420478 21420499 -68084054 + GC_rich Low_complexity Low_complexity 1 21 0 288 248 89 30 chr17 21421582 21421683 -68082870 + MIR3 SINE MIR 48 154 -54 386 264 61 18 chr17 21422222 21422385 -68082168 - L2 LINE L2 -219 3053 2884 234 273 34 11 chr17 21422712 21422800 -68081753 + MIR SINE MIR 27 116 -146 245 290 65 36 chr17 21423527 21423665 -68080888 - L2 LINE L2 -182 3090 2949 374 318 52 0 chr17 21423700 21423854 -68080699 - MIR SINE MIR -68 194 33 281 261 52 78 chr17 21423912 21424027 -68080526 + MIR3 SINE MIR 58 169 -39 363 261 166 51 chr17 21424608 21424861 -68079692 - LTR16C LTR ERVL -6 485 204 255 186 0 0 chr17 21425196 21425239 -68079314 + MIR3 SINE MIR 112 154 -54 1937 162 64 9 chr17 21425309 21425655 -68078898 - MLT1A1 LTR MaLR 0 365 1 1930 102 7 62 chr17 21425954 21426258 -68078295 + AluSc SINE Alu 2 288 -21 2212 84 3 3 chr17 21426261 21426559 -68077994 - AluY SINE Alu -13 298 1 602 198 8 40 chr17 21426566 21426692 -68077861 - FLAM_A SINE Alu -9 124 3 513 269 28 7 chr17 21426808 21426953 -68077600 + MIR SINE MIR 7 154 -108 766 237 153 0 chr17 21427588 21427778 -68076775 + MIR SINE MIR 15 233 -29 809 270 131 29 chr17 21428001 21428656 -68075897 - L2 LINE L2 0 3272 2539 2307 110 0 0 chr17 21428873 21429183 -68075370 + AluSx SINE Alu 1 310 -2 1880 176 126 8 chr17 21429550 21429931 -68074622 - MSTB LTR MaLR 0 426 1 189 250 0 0 chr17 21430081 21430125 -68074428 + MIR SINE MIR 109 152 -56 471 282 26 6 chr17 21430826 21430982 -68073571 - L2 LINE L2 -221 3051 2893 430 231 48 101 chr17 21431331 21431479 -68073074 + MIR SINE MIR 5 143 -65 530 275 109 24 chr17 21432155 21432366 -68072187 - L2 LINE L2 -21 3292 3064 398 273 43 29 chr17 21432431 21432570 -68071983 - MIR3 SINE MIR -63 145 5 268 253 24 36 chr17 21432664 21432747 -68071806 - MIR3 SINE MIR -53 155 74 330 26 0 0 chr17 21432863 21432902 -68071651 + (CTG)n Simple_repeat Simple_repeat 3 41 0 205 175 25 0 chr17 21433749 21433789 -68070764 - L2 LINE L2 -18 3254 3214 257 347 123 6 chr17 21434706 21434876 -68069677 - L2 LINE L2 -160 3112 2923 1486 126 20 157 chr17 21434894 21435244 -68069309 + AluYb8 SINE Alu 1 302 -16 369 0 0 0 chr17 21435604 21435645 -68068908 + (TG)n Simple_repeat Simple_repeat 1 41 0 207 318 55 0 chr17 21436010 21436126 -68068427 - MIR SINE MIR -61 147 60 270 304 16 48 chr17 21436334 21436459 -68068094 + MIR SINE MIR 45 165 -97 2163 69 34 10 chr17 21436597 21436888 -68067665 - AluY SINE Alu -13 298 1 2529 54 0 6 chr17 21437216 21437529 -68067024 + AluY SINE Alu 1 311 0 2417 77 0 3 chr17 21437638 21437950 -68066603 + AluY SINE Alu 1 311 0 319 215 63 0 chr17 21438452 21438531 -68066022 - MIR SINE MIR -75 133 50 377 250 154 0 chr17 21439140 21439244 -68065309 + L2 LINE L2 3193 3312 -1 364 228 13 0 chr17 21439309 21439388 -68065165 - MIR SINE MIR -110 152 73 306 239 91 0 chr17 21440405 21440493 -68064060 - MIR SINE MIR -68 140 45 180 328 147 17 chr17 21440638 21440754 -68063799 - MIR3 SINE MIR -70 138 8 202 244 106 65 chr17 21441203 21441326 -68063227 - MIR3 SINE MIR -67 141 14 208 114 0 68 chr17 21442986 21443030 -68061523 + (TGGGGG)n Simple_repeat Simple_repeat 4 44 0 504 281 99 26 chr17 21443999 21444191 -68060362 + L2 LINE L2 3108 3313 0 261 336 123 0 chr17 21444192 21444338 -68060215 + L2 LINE L2 2847 3010 -262 258 401 154 7 chr17 21444532 21444804 -68059749 - L2 LINE L2 0 3272 2961 223 297 0 0 chr17 21445912 21445976 -68058577 - MIR SINE MIR -119 143 80 1458 88 5 51 chr17 21446746 21446792 -68057761 + L1PB1 LINE L1 5928 5975 -176 1950 125 35 0 chr17 21446792 21447081 -68057472 + AluSx SINE Alu 1 299 -13 1458 88 5 51 chr17 21447081 21447251 -68057302 + L1PB1 LINE L1 5975 6134 -17 340 264 19 0 chr17 21448433 21448531 -68056022 - MIR SINE MIR -63 145 64 518 329 6 6 chr17 21449372 21449533 -68055020 - MIR SINE MIR -35 227 67 182 332 193 25 chr17 21450540 21450742 -68053811 + L2 LINE L2 3077 3312 -1 691 351 34 37 chr17 21451703 21452113 -68052440 + L2 LINE L2 2864 3272 0 197 195 40 121 chr17 21453053 21453202 -68051351 + L2 LINE L2 2844 2980 -292 1534 160 15 105 chr17 21453609 21453952 -68050601 + AluJb SINE Alu 1 312 0 1938 151 3 3 chr17 21454017 21454328 -68050225 + AluSx SINE Alu 1 311 -1 2339 71 0 0 chr17 21454332 21454628 -68049925 + AluY SINE Alu 2 297 -14 1386 235 0 26 chr17 21454671 21454831 -68049722 + L1MD2 LINE L1 4928 5091 -1055 2274 206 15 13 chr17 21454831 21455291 -68049262 + MER65C LTR ERV1 1 461 0 1386 235 0 26 chr17 21455291 21455509 -68049044 + L1MD2 LINE L1 5091 5296 -850 1257 176 0 9 chr17 21455511 21455732 -68048821 + AluJo SINE Alu 87 305 -7 4281 173 50 32 chr17 21455733 21456597 -68047956 + L1MD2 LINE L1 5281 6166 -193 1517 123 60 96 chr17 21456597 21456899 -68047654 + AluJo SINE Alu 7 297 -15 4281 173 50 32 chr17 21456899 21457007 -68047546 + L1MD2 LINE L1 6166 6271 -88 200 306 0 0 chr17 21458107 21458156 -68046397 + MIR SINE MIR 70 118 -90 25 65 0 0 chr17 21458345 21458391 -68046162 + GC_rich Low_complexity Low_complexity 1 46 0 189 0 0 0 chr17 21458837 21458858 -68045695 + (CCCCAG)n Simple_repeat Simple_repeat 2 22 0 37 52 0 0 chr17 21458882 21458940 -68045613 + GC_rich Low_complexity Low_complexity 1 58 0 253 242 0 15 chr17 21460501 21460567 -68043986 + MER117 DNA MER1_type 42 106 -91 195 333 90 62 chr17 21460839 21460983 -68043570 + MIR SINE MIR 60 207 -55 219 69 0 0 chr17 21460992 21461021 -68043532 + (GGA)n Simple_repeat Simple_repeat 2 30 0 186 280 108 65 chr17 21461147 21461240 -68043313 - MIR3 SINE MIR -23 185 89 347 327 115 6 chr17 21461753 21461909 -68042644 - MIR3 SINE MIR -33 175 3 231 298 120 38 chr17 21461972 21462130 -68042423 - MIR3 SINE MIR -19 189 19 440 339 94 0 chr17 21462661 21462832 -68041721 + MIR3 SINE MIR 22 208 0 224 195 221 13 chr17 21463245 21463322 -68041231 - MIR3 SINE MIR -29 179 87 509 276 47 75 chr17 21463491 21463705 -68040848 - MIR SINE MIR -15 247 40 2349 92 0 0 chr17 21463828 21464131 -68040422 - AluSg SINE Alu -6 304 2 302 316 17 42 chr17 21464566 21464711 -68039842 - MIR SINE MIR -64 144 38 222 200 226 0 chr17 21464748 21464834 -68039719 + MIR SINE MIR 37 147 -115 363 298 53 72 chr17 21465089 21465297 -68039256 + MIR SINE MIR 47 250 -12 237 200 0 0 chr17 21465376 21465421 -68039132 + L3 LINE CR1 1424 1468 -109 293 226 95 12 chr17 21465430 21465514 -68039039 + MIR SINE MIR 17 107 -101 468 280 51 17 chr17 21466077 21466252 -68038301 - MIR3 SINE MIR -3 205 25 3687 256 73 40 chr17 21466869 21467200 -68037353 - L1MEc LINE L1 -4696 1700 1382 2230 115 0 0 chr17 21467200 21467504 -68037049 - AluSx SINE Alu -8 304 1 3687 256 73 40 chr17 21467504 21468191 -68036362 - L1MEc LINE L1 -5014 1382 719 694 270 93 0 chr17 21468191 21468395 -68036158 + MER58A DNA MER1_type 2 224 0 3687 256 73 40 chr17 21468395 21468985 -68035568 - L1MEc LINE L1 -5677 719 37 418 230 248 0 chr17 21469210 21469371 -68035182 - MIR SINE MIR -51 211 11 254 210 20 90 chr17 21469385 21469485 -68035068 - MIR3 SINE MIR -21 187 95 341 273 61 0 chr17 21470365 21470464 -68034089 - MIR3 SINE MIR -16 192 88 195 305 0 0 chr17 21470787 21470846 -68033707 + MIR SINE MIR 89 147 -61 258 333 0 0 chr17 21471722 21471812 -68032741 - MIR3 SINE MIR -17 191 102 186 397 0 0 chr17 21471923 21471986 -68032567 - L2 LINE L2 -85 3187 3125 411 307 26 0 chr17 21471987 21472101 -68032452 + MIR SINE MIR 91 207 -55 378 329 146 0 chr17 21472880 21473099 -68031454 - L3 LINE CR1 -96 1481 1231 201 294 35 24 chr17 21473262 21473347 -68031206 + MIR SINE MIR 59 144 -118 378 228 54 0 chr17 21473547 21473639 -68030914 - MIR SINE MIR -70 138 42 201 239 57 68 chr17 21473829 21473917 -68030636 + MIR SINE MIR 38 124 -84 234 329 0 25 chr17 21474927 21475006 -68029547 - L2 LINE L2 0 3272 3196 * 292 255 53 21 chr17 21474995 21475089 -68029464 - L3 LINE CR1 -65 1512 1416 578 302 22 16 chr17 21475161 21475343 -68029210 - L3 LINE CR1 -79 1498 1316 307 259 99 15 chr17 21475465 21475596 -68028957 + MIR3 SINE MIR 2 143 -65 485 309 65 0 chr17 21475708 21475847 -68028706 - MIR SINE MIR -1 261 114 299 309 65 22 chr17 21476567 21476706 -68027847 - MIR3 SINE MIR -14 194 50 230 293 110 61 chr17 21476996 21477160 -68027393 + MIR SINE MIR 40 211 -51 426 267 67 18 chr17 21477758 21477903 -68026650 + MIR SINE MIR 41 192 -62 2351 53 30 0 chr17 21478769 21479068 -68025485 - AluY SINE Alu -3 308 1 508 253 209 6 chr17 21479072 21479254 -68025299 + MER20 DNA MER1_type 1 219 0 210 291 175 0 chr17 21479772 21479875 -68024678 + MIR SINE MIR 69 189 -73 192 286 39 13 chr17 21479924 21480001 -68024552 + MIR SINE MIR 42 120 -88 306 352 28 42 chr17 21480117 21480259 -68024294 - MIR SINE MIR -14 248 109 207 259 48 102 chr17 21480227 21480374 -68024179 - MIR3 SINE MIR -67 141 3 * 223 200 33 17 chr17 21480561 21480621 -68023932 - MIR SINE MIR -58 150 90 189 319 29 0 chr17 21480922 21480991 -68023562 - MIR SINE MIR -79 129 59 229 346 43 43 chr17 21482093 21482281 -68022272 + L3 LINE CR1 1319 1506 -71 216 268 90 10 chr17 21482235 21482338 -68022215 + MER5A DNA MER1_type 25 131 -47 * 304 238 12 25 chr17 21485862 21485942 -68018611 - MIR SINE MIR -116 146 68 220 195 35 138 chr17 21486830 21486917 -68017636 + MIR3 SINE MIR 125 202 -6 2319 48 7 7 chr17 21486932 21487222 -68017331 - AluY SINE Alu -21 290 1 534 121 71 30 chr17 21487234 21487333 -68017220 - L1MB8 LINE L1 0 6178 6076 2315 70 0 17 chr17 21487419 21487721 -68016832 - AluSp SINE Alu -16 297 1 312 255 43 21 chr17 21487875 21487969 -68016584 + MIR3 SINE MIR 60 155 -53 198 209 141 18 chr17 21488315 21488393 -68016160 + MIR SINE MIR 90 176 -56 288 318 0 36 chr17 21488590 21488700 -68015853 - MIR3 SINE MIR -10 198 93 1977 112 3 41 chr17 21488817 21488938 -68015615 + AluSx SINE Alu 14 138 -174 2305 92 0 22 chr17 21488938 21489255 -68015298 + AluSg SINE Alu 1 310 0 1977 112 3 41 chr17 21489255 21489427 -68015126 + AluSx SINE Alu 138 296 -16 209 121 0 0 chr17 21490171 21490204 -68014349 - MIR SINE MIR -62 146 114 2310 68 0 23 chr17 21490241 21490548 -68014005 - AluY SINE Alu -11 300 1 454 305 53 7 chr17 21491159 21491310 -68013243 - MIR SINE MIR -80 182 25 275 247 41 0 chr17 21493134 21493207 -68011346 - L3 LINE CR1 -89 1488 1413 211 209 105 35 chr17 21494109 21494195 -68010358 + MIR SINE MIR 57 148 -60 288 316 103 7 chr17 21495284 21495420 -68009133 - MIR3 SINE MIR 0 208 60 209 255 19 85 chr17 21495575 21495681 -68008872 + L2 LINE L2 2870 2968 -304 201 158 26 0 chr17 21495753 21495791 -68008762 + CT-rich Low_complexity Low_complexity 1 39 0 305 313 9 18 chr17 21496079 21496191 -68008362 + MIR SINE MIR 36 146 -116 2218 69 49 0 chr17 21496359 21496647 -68007906 - AluSx SINE Alu -10 302 1 196 333 14 0 chr17 21496652 21496721 -68007832 - MIR3 SINE MIR -49 159 90 287 363 9 18 chr17 21497148 21497261 -68007292 - MIR SINE MIR -81 181 70 203 328 92 0 chr17 21497829 21497948 -68006605 + L2 LINE L2 2457 2586 -728 1836 81 0 5 chr17 21498046 21498268 -68006285 - AluSx SINE Alu -91 221 1 582 240 0 32 chr17 21498716 21498870 -68005683 + MER58B DNA MER1_type 193 341 0 663 168 68 11 chr17 21499041 21499258 -68005295 - L2 LINE L2 -297 3016 2784 303 213 246 8 chr17 21499798 21499920 -68004633 + MIR3 SINE MIR 34 184 -24 1498 145 31 4 chr17 21499965 21500192 -68004361 - AluSx SINE Alu -79 233 1 465 299 57 0 chr17 21501823 21501980 -68002573 + MIR3 SINE MIR 27 192 -16 433 229 19 19 chr17 21502312 21502417 -68002136 + MIR3 SINE MIR 77 181 -27 183 324 70 18 chr17 21502775 21503047 -68001506 - L2 LINE L2 -570 2744 2459 212 333 56 0 chr17 21503580 21503688 -68000865 + MIR3 SINE MIR 8 121 -87 2927 154 55 76 chr17 21504468 21504773 -67999780 + L1MB5 LINE L1 5514 5824 -350 1610 181 39 0 chr17 21504773 21505055 -67999498 + AluJb SINE Alu 5 297 -15 2927 154 55 76 chr17 21505055 21505370 -67999183 + L1MB5 LINE L1 5824 6122 -52 2346 52 11 0 chr17 21505370 21505674 -67998879 + AluSc SINE Alu 6 312 0 2927 154 55 76 chr17 21505674 21505726 -67998827 + L1MB5 LINE L1 6122 6174 0 474 294 15 50 chr17 21505814 21505960 -67998593 + MIR SINE MIR 22 161 -101 1865 121 8 4 chr17 21505960 21506224 -67998329 - AluSx SINE Alu -9 303 39 474 294 15 50 chr17 21506224 21506278 -67998275 + MIR SINE MIR 161 215 -47 2087 156 3 0 chr17 21506355 21506663 -67997890 + AluJb SINE Alu 3 311 -1 2447 60 3 0 chr17 21506874 21507204 -67997349 - AluSp SINE Alu 0 331 1 664 197 24 0 chr17 21507206 21507333 -67997220 - FLAM_A SINE Alu -2 131 2 246 240 0 0 chr17 21507452 21507502 -67997051 + MER91B DNA MER1_type 1 50 -140 353 229 203 0 chr17 21507698 21507816 -67996737 - MIR SINE MIR -75 187 46 2218 82 9 48 chr17 21508003 21508319 -67996234 - AluSq SINE Alu -9 304 1 180 152 22 65 chr17 21508394 21508440 -67996113 + L2 LINE L2 3010 3053 -219 291 255 154 0 chr17 21509005 21509146 -67995407 - MIR SINE MIR -75 187 33 1109 208 14 0 chr17 21509182 21509389 -67995164 - MER46A DNA MER2_type 0 236 27 212 244 0 0 chr17 21509439 21509480 -67995073 + (CCA)n Simple_repeat Simple_repeat 3 43 0 197 259 0 0 chr17 21509558 21509612 -67994941 - MIR SINE MIR -62 146 93 2306 98 10 13 chr17 21509675 21509982 -67994571 + AluSg SINE Alu 1 306 -4 243 200 30 130 chr17 21510331 21510431 -67994122 - MER5A DNA MER1_type -30 159 70 262 336 44 0 chr17 21510552 21510665 -67993888 - MIR3 SINE MIR -39 169 52 2071 140 3 13 chr17 21512128 21512442 -67992111 + AluSx SINE Alu 1 311 -1 368 282 80 0 chr17 21513581 21513744 -67990809 + L1MC4a LINE L1 5722 5897 -1911 1886 143 48 17 chr17 21513860 21514154 -67990399 - AluJb SINE Alu -9 303 1 450 307 3 9 chr17 21514695 21514846 -67989707 - MIR SINE MIR -45 163 17 247 310 142 0 chr17 21515406 21515519 -67989034 + L2 LINE L2 2973 3101 -171 688 226 31 67 chr17 21515721 21515839 -67988714 - L1MB5 LINE L1 -8 6166 6045 2449 108 0 0 chr17 21515839 21516146 -67988407 - AluSx SINE Alu -5 307 1 688 226 31 67 chr17 21516146 21516296 -67988257 - L1MB5 LINE L1 -129 6045 5897 2366 185 113 93 chr17 21516316 21517228 -67987325 + MER21A LTR ERV1 2 931 0 1079 243 11 7 chr17 21517228 21517500 -67987053 - L1MB4 LINE L1 -247 5933 5661 26 0 0 0 chr17 21517500 21517526 -67987027 + AT_rich Low_complexity Low_complexity 1 26 0 1637 168 69 14 chr17 21517528 21517819 -67986734 - AluSx SINE Alu -5 307 1 950 176 44 0 chr17 21517857 21518039 -67986514 - L1MB4 LINE L1 -506 5674 5485 1220 182 5 14 chr17 21518041 21518255 -67986298 - AluJb SINE Alu -15 297 86 719 156 1 64 chr17 21518257 21518413 -67986140 - L1P4 LINE L1 -681 5487 5342 3297 172 55 83 chr17 21518417 21519180 -67985373 - L1MC1 LINE L1 -89 6524 5742 2151 120 3 0 chr17 21519180 21519489 -67985064 + AluSx SINE Alu 1 310 0 2064 95 18 21 chr17 21519491 21519805 -67984748 + AluSx SINE Alu 1 313 0 3297 172 55 83 chr17 21519805 21520071 -67984482 - L1MC1 LINE L1 -872 5741 5469 2176 122 0 25 chr17 21520071 21520390 -67984163 - AluY SINE Alu 0 311 1 3297 172 55 83 chr17 21520390 21520501 -67984052 - L1MC1 LINE L1 -1144 5469 5356 1825 164 0 26 chr17 21520501 21520811 -67983742 - AluJb SINE Alu -10 302 1 3297 172 55 83 chr17 21520811 21521170 -67983383 - L1MC1 LINE L1 -1257 5356 5082 696 125 0 31 chr17 21521184 21521312 -67983241 - AluSp/q SINE Alu -1 312 189 1945 67 0 28 chr17 21521351 21521604 -67982949 + AluY SINE Alu 45 290 -21 6812 138 114 100 chr17 21521663 21521753 -67982800 - L1MC1 LINE L1 -4514 1912 1825 2029 141 3 19 chr17 21521753 21522065 -67982488 + AluJb SINE Alu 1 307 -5 6812 138 114 100 chr17 21522065 21522684 -67981869 - L1MC1 LINE L1 -4601 1825 1216 2354 107 0 0 chr17 21522684 21522982 -67981571 + AluSx SINE Alu 1 298 -14 6812 138 114 100 chr17 21522982 21523206 -67981347 - L1MC1 LINE L1 -5210 1216 997 2144 123 3 10 chr17 21523206 21523506 -67981047 + AluSx SINE Alu 1 298 -14 2270 123 0 0 chr17 21523516 21523818 -67980735 + AluSx SINE Alu 1 302 -10 6812 138 114 100 chr17 21523818 21524727 -67979826 - L1MC1 LINE L1 -5437 989 30 839 151 5 76 chr17 21524730 21524782 -67979771 - L1MB5 LINE L1 -8 6166 6112 2125 138 7 0 chr17 21524782 21525086 -67979467 + AluJb SINE Alu 1 306 -6 839 151 5 76 chr17 21525086 21525207 -67979346 - L1MB5 LINE L1 -62 6112 6004 2244 129 0 3 chr17 21525207 21525509 -67979044 + AluSg SINE Alu 1 301 -9 1937 113 3 17 chr17 21525560 21525852 -67978701 + MER1B DNA MER1_type 52 339 0 2186 191 35 12 chr17 21525884 21526083 -67978470 - L1MB5 LINE L1 -180 5994 5801 1744 151 4 22 chr17 21526083 21526379 -67978174 - AluSx SINE Alu 0 309 19 2186 191 35 12 chr17 21526379 21526666 -67977887 - L1MB5 LINE L1 -373 5801 5496 870 156 0 7 chr17 21526666 21526801 -67977752 - FLAM_A SINE Alu -1 141 8 497 179 17 60 chr17 21526808 21526966 -67977587 - L1MB5 LINE L1 -666 5500 5339 1771 174 43 0 chr17 21526973 21527272 -67977281 - AluSx SINE Alu 0 312 1 2522 191 111 49 chr17 21527282 21527340 -67977213 - L1MB5 LINE L1 -778 5368 5315 2447 82 0 0 chr17 21527340 21527634 -67976919 + AluSg SINE Alu 1 294 -16 213 39 0 0 chr17 21527635 21527661 -67976892 + (TA)n Simple_repeat Simple_repeat 2 27 0 2022 154 0 3 chr17 21527670 21527963 -67976590 + AluJb SINE Alu 1 292 -20 2522 191 111 49 chr17 21527963 21528309 -67976244 - L1MB5 LINE L1 -838 5308 4985 2204 110 0 58 chr17 21528309 21528636 -67975917 + AluSx SINE Alu 1 308 -4 2522 191 111 49 chr17 21528636 21529072 -67975481 - L1MB5 LINE L1 -1161 4985 4462 372 180 0 0 chr17 21529113 21529174 -67975379 - AluSc SINE Alu -9 290 230 866 107 0 0 chr17 21529233 21529345 -67975208 - AluSg/x SINE Alu -22 288 177 2922 10 0 0 chr17 21531224 21531531 -67973022 + AluYa5 SINE Alu 1 307 -4 198 0 0 0 chr17 21532763 21532785 -67971768 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2235 82 0 7 chr17 21532787 21533069 -67971484 - AluY SINE Alu -31 280 1 3181 182 32 24 chr17 21533091 21533768 -67970785 + L1MB7 LINE L1 5441 6123 -61 2237 102 0 3 chr17 21533768 21534085 -67970468 - AluSx SINE Alu 0 316 1 271 246 9 45 chr17 21534714 21534824 -67969729 + L1ME4a LINE L1 5991 6096 -25 24 53 0 0 chr17 21534858 21534896 -67969657 + AT_rich Low_complexity Low_complexity 1 38 0 1897 150 3 17 chr17 21535076 21535370 -67969183 + AluJb SINE Alu 1 290 -22 2532 199 52 9 chr17 21535410 21535826 -67968727 + L1MD2 LINE L1 5549 5996 -363 1252 179 110 71 chr17 21535826 21536207 -67968346 + MSTD LTR MaLR 1 396 0 2532 199 52 9 chr17 21536207 21536344 -67968209 + L1MD2 LINE L1 5996 6126 -233 309 82 0 0 chr17 21536345 21536394 -67968159 + (CA)n Simple_repeat Simple_repeat 1 49 0 566 246 66 6 chr17 21536402 21536585 -67967968 + L1MD2 LINE L1 6165 6358 -1 2361 89 0 7 chr17 21536594 21536887 -67967666 + AluSg SINE Alu 1 291 -19 342 0 0 0 chr17 21536890 21536928 -67967625 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2284 66 45 0 chr17 21537049 21537335 -67967218 - AluY SINE Alu -12 299 1 494 287 236 3 chr17 21537378 21537747 -67966806 + L1ME3A LINE L1 5493 5947 -223 2317 119 0 0 chr17 21538024 21538327 -67966226 - AluSx SINE Alu -9 303 1 2124 136 3 3 chr17 21538377 21538678 -67965875 - AluJb SINE Alu -11 301 1 2215 101 7 0 chr17 21538825 21539102 -67965451 + AluSx SINE Alu 1 279 -33 198 0 0 0 chr17 21539107 21539129 -67965424 + (CAAT)n Simple_repeat Simple_repeat 2 23 0 1572 230 46 11 chr17 21539258 21539760 -67964793 + L1MB5 LINE L1 3872 4385 -1761 2353 86 0 52 chr17 21539760 21540085 -67964468 + AluY SINE Alu 2 309 -2 1572 230 46 11 chr17 21540085 21540124 -67964429 + L1MB5 LINE L1 4385 4421 -1725 * 3831 158 87 50 chr17 21540096 21540186 -67964367 + L1MB5 LINE L1 5188 5273 -901 2041 148 0 16 chr17 21540186 21540496 -67964057 + AluJb SINE Alu 1 305 -7 3831 158 87 50 chr17 21540496 21541345 -67963208 + L1MB5 LINE L1 5273 6168 -6 862 249 20 10 chr17 21541407 21541604 -67962949 - MER20 DNA MER1_type -20 199 1 237 293 0 0 chr17 21541605 21541663 -67962890 + L1MC4 LINE L1 7605 7662 -380 432 321 107 7 chr17 21541776 21542047 -67962506 + L1ME4a LINE L1 5530 5827 -294 829 141 16 0 chr17 21542051 21542172 -67962381 + AluJb SINE Alu 178 300 -12 217 277 31 0 chr17 21542787 21542852 -67961701 - MIR3 SINE MIR -28 180 114 190 301 240 7 chr17 21543314 21543460 -67961093 + MIR SINE MIR 8 187 -75 1750 159 14 37 chr17 21543492 21543644 -67960909 - AluJo SINE Alu -23 289 146 2244 112 0 3 chr17 21543644 21543938 -67960615 - AluSg SINE Alu -17 293 1 1750 159 14 37 chr17 21543938 21544081 -67960472 - AluJo SINE Alu -166 146 1 974 227 106 0 chr17 21544172 21544445 -67960108 - MER33 DNA MER1_type -22 302 1 209 246 15 31 chr17 21544886 21544951 -67959602 - MIR SINE MIR -157 105 42 238 271 0 0 chr17 21545123 21545182 -67959371 + MER34C LTR ERV1 43 101 -484 1106 116 79 195 chr17 21545447 21545765 -67958788 + AluJo SINE Alu 20 300 -12 1766 159 50 31 chr17 21546169 21546478 -67958075 + MLT1A1 LTR MaLR 1 319 -46 2470 79 0 20 chr17 21546478 21546783 -67957770 + AluSp SINE Alu 1 299 -14 1766 159 50 31 chr17 21546783 21546831 -67957722 + MLT1A1 LTR MaLR 319 365 0 1193 181 39 24 chr17 21546831 21546990 -67957563 + MLT1A1-int LTR MaLR 1 167 -1568 1660 178 26 79 chr17 21546990 21547042 -67957511 + MSTB1 LTR MaLR 1 54 -378 2282 92 10 3 chr17 21547042 21547337 -67957216 + AluSx SINE Alu 1 297 -15 1660 178 26 79 chr17 21547337 21547740 -67956813 + MSTB1 LTR MaLR 54 432 0 1193 181 39 24 chr17 21547740 21547834 -67956719 + MLT1A1-int LTR MaLR 167 258 -1477 2128 146 0 3 chr17 21547834 21548135 -67956418 + AluJb SINE Alu 1 300 -12 2149 138 0 3 chr17 21548135 21548432 -67956121 + AluSx SINE Alu 1 296 -16 3300 210 101 122 chr17 21548438 21548602 -67955951 + MLT1A1-int LTR MaLR 407 573 -1162 1931 149 3 16 chr17 21548602 21548918 -67955635 + AluJo SINE Alu 1 312 0 3300 210 101 122 chr17 21548918 21548958 -67955595 + MLT1A1-int LTR MaLR 573 612 -1123 2184 117 0 23 chr17 21548958 21549267 -67955286 - AluSc SINE Alu -7 302 1 3300 210 101 122 chr17 21549267 21549318 -67955235 + MLT1A1-int LTR MaLR 612 663 -1072 2147 135 20 0 chr17 21549318 21549622 -67954931 + AluJb SINE Alu 1 310 -2 3300 210 101 122 chr17 21549622 21550321 -67954232 + MLT1A1-int LTR MaLR 663 1416 -319 482 186 0 0 chr17 21550321 21550407 -67954146 - AluJ/FLAM SINE Alu -225 87 2 3300 210 101 122 chr17 21550407 21550721 -67953832 + MLT1A1-int LTR MaLR 1416 1735 0 1245 185 80 74 chr17 21550721 21550959 -67953594 + MLT1A1 LTR MaLR 1 243 -122 2484 80 3 0 chr17 21550959 21551260 -67953293 - AluSp SINE Alu -11 302 1 1245 185 80 74 chr17 21551260 21551384 -67953169 + MLT1A1 LTR MaLR 243 365 0 435 322 80 67 chr17 21551390 21551763 -67952790 - L1ME4a LINE L1 -217 5904 5527 2271 236 50 43 chr17 21552462 21552714 -67951839 - L1ME1 LINE L1 -4 6162 5913 2108 139 0 16 chr17 21552714 21553023 -67951530 - AluSx SINE Alu -8 304 1 2271 236 50 43 chr17 21553023 21553239 -67951314 - L1ME1 LINE L1 -253 5913 5700 1848 116 60 0 chr17 21553239 21553513 -67951040 - AluSx SINE Alu 0 313 25 2271 236 50 43 chr17 21553513 21553616 -67950937 - L1ME1 LINE L1 -466 5700 5599 2435 70 0 10 chr17 21553616 21553918 -67950635 + AluY SINE Alu 1 299 -12 2271 236 50 43 chr17 21553918 21554022 -67950531 - L1ME1 LINE L1 -567 5599 5479 379 179 114 0 chr17 21554020 21554160 -67950393 - L1M4 LINE L1 -2865 3281 3126 * 189 107 0 0 chr17 21554251 21554279 -67950274 + (GGAAA)n Simple_repeat Simple_repeat 3 30 0 1972 94 13 82 chr17 21554986 21555304 -67949249 - AluSx SINE Alu -16 296 1 1930 259 49 8 chr17 21555304 21555917 -67948636 - L1M4 LINE L1 -3191 2955 2318 786 143 0 0 chr17 21556425 21556574 -67947979 - FLAM_C SINE Alu 0 149 1 2678 82 3 0 chr17 21556583 21556937 -67947616 - THE1A LTR MaLR 0 355 1 1790 160 38 0 chr17 21556943 21557236 -67947317 - AluSx SINE Alu -8 304 1 2340 72 10 7 chr17 21557736 21558028 -67946525 - AluY SINE Alu -10 301 9 1751 178 0 13 chr17 21558128 21558443 -67946110 - AluSx SINE Alu -1 311 1 3395 163 136 22 chr17 21558949 21559722 -67944831 - MER21B LTR ERV1 0 863 3 192 250 0 0 chr17 21560190 21560234 -67944319 + L2 LINE L2 3143 3186 -86 207 286 143 0 chr17 21560248 21560325 -67944228 - L2 LINE L2 -1 3271 3184 26 30 0 0 chr17 21560769 21560802 -67943751 + AT_rich Low_complexity Low_complexity 1 33 0 462 204 136 10 chr17 21560802 21560905 -67943648 - FLAM_C SINE Alu -25 118 3 589 266 229 8 chr17 21566588 21566942 -67937611 - L2 LINE L2 -18 3295 2864 190 214 0 71 chr17 21567173 21567229 -67937324 - L2 LINE L2 -509 2805 2754 949 271 87 28 chr17 21567267 21567388 -67937165 - L2 LINE L2 -656 2658 2546 2668 65 0 0 chr17 21567388 21567697 -67936856 - AluY SINE Alu -2 309 1 949 271 87 28 chr17 21567697 21568011 -67936542 - L2 LINE L2 -768 2546 2197 2141 117 23 3 chr17 21568039 21568338 -67936215 - AluSx SINE Alu -7 305 1 211 298 48 0 chr17 21568500 21568584 -67935969 - MIR SINE MIR -72 136 49 282 56 0 0 chr17 21569018 21569054 -67935499 + (A)n Simple_repeat Simple_repeat 1 36 0 2518 52 23 10 chr17 21569750 21570060 -67934493 - AluYb8 SINE Alu -4 314 1 2146 102 38 7 chr17 21571417 21571710 -67932843 + AluSq SINE Alu 1 302 -11 1539 161 0 97 chr17 21571713 21572024 -67932529 - AluJb SINE Alu -31 281 1 2268 106 3 10 chr17 21572129 21572432 -67932121 + AluSx SINE Alu 1 301 -11 1815 178 0 10 chr17 21572459 21572757 -67931796 + AluJo SINE Alu 1 295 -17 202 239 28 56 chr17 21573050 21573121 -67931432 + MER5B DNA MER1_type 50 118 -60 392 306 98 16 chr17 21573379 21573572 -67930981 + L2 LINE L2 3102 3310 -3 1458 130 8 71 chr17 21573600 21573666 -67930887 + AluSq SINE Alu 61 130 -178 252 0 0 0 chr17 21573666 21573694 -67930859 + (CA)n Simple_repeat Simple_repeat 2 29 0 1458 130 8 71 chr17 21573694 21573890 -67930663 + AluSq SINE Alu 130 308 0 209 217 29 58 chr17 21574084 21574153 -67930400 + MER5B DNA MER1_type 50 116 -62 2386 95 0 13 chr17 21574478 21574783 -67929770 - AluSx SINE Alu -11 301 1 508 308 100 54 chr17 21574792 21574933 -67929620 - L1ME4a LINE L1 -5 6116 5983 1739 175 13 7 chr17 21574933 21575241 -67929312 - AluJo SINE Alu -2 310 1 508 308 100 54 chr17 21575241 21575430 -67929123 - L1ME4a LINE L1 -138 5983 5771 2236 90 45 0 chr17 21576217 21576506 -67928047 - AluSg SINE Alu -8 302 1 2060 138 0 25 chr17 21576517 21576835 -67927718 - AluSx SINE Alu -2 310 1 747 213 0 18 chr17 21576837 21577001 -67927552 - FRAM SINE Alu -5 161 1 309 344 38 0 chr17 21577023 21577180 -67927373 + MIR SINE MIR 88 250 -12 397 240 61 87 chr17 21577211 21577440 -67927113 - L1ME4a LINE L1 -382 5739 5517 2060 157 93 21 chr17 21578430 21578755 -67925798 - LTR47A LTR ERVL -1 451 88 2488 63 10 3 chr17 21578755 21579056 -67925497 - AluSq SINE Alu -9 304 2 2060 157 93 21 chr17 21579056 21579151 -67925402 - LTR47A LTR ERVL -364 88 1 219 336 47 35 chr17 21579154 21579424 -67925129 - L2 LINE L2 -23 3249 2907 757 181 145 108 chr17 21579462 21579712 -67924841 - MLT1C LTR MaLR -185 205 2 257 271 0 0 chr17 21579814 21579873 -67924680 + L2 LINE L2 2531 2589 -725 260 189 19 19 chr17 21580144 21580197 -67924356 + L2 LINE L2 3171 3223 -90 193 211 88 0 chr17 21580443 21580500 -67924053 + MIR SINE MIR 78 139 -69 308 268 72 0 chr17 21580580 21580677 -67923876 - MIR SINE MIR -70 192 89 3186 86 12 7 chr17 21580702 21581134 -67923419 + MER1A DNA MER1_type 96 529 0 289 278 44 11 chr17 21581141 21581231 -67923322 - MIR SINE MIR -168 94 2 245 246 49 84 chr17 21581464 21581606 -67922947 - L1MC4 LINE L1 -142 7900 7764 2223 107 0 0 chr17 21582153 21582456 -67922097 + AluSg SINE Alu 3 305 0 219 326 32 21 chr17 21583027 21583122 -67921431 - MIR SINE MIR -112 150 55 2043 139 7 19 chr17 21583450 21583760 -67920793 - AluSx SINE Alu -6 306 1 1979 103 0 97 chr17 21585646 21585975 -67918578 - AluSx SINE Alu -15 297 1 2165 119 3 0 chr17 21586410 21586705 -67917848 - AluSq SINE Alu -16 297 2 2221 77 49 7 chr17 21587483 21587769 -67916784 - AluSc SINE Alu -11 298 1 200 0 100 0 chr17 21588863 21588893 -67915660 + T-rich Low_complexity Low_complexity 3 35 0 2336 112 0 0 chr17 21588905 21589217 -67915336 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 21589675 21589696 -67914857 + AT_rich Low_complexity Low_complexity 1 21 0 622 215 0 0 chr17 21589696 21589817 -67914736 + 7SLRNA srpRNA srpRNA 200 320 0 38 0 0 0 chr17 21589824 21589862 -67914691 + AT_rich Low_complexity Low_complexity 1 38 0 302 263 50 40 chr17 21589976 21590075 -67914478 + L1ME4a LINE L1 6016 6115 -6 329 296 25 50 chr17 21590675 21590834 -67913719 + MIR SINE MIR 102 256 -6 2025 159 88 14 chr17 21593806 21593831 -67910722 - L1MB7 LINE L1 -20 6164 6142 2150 112 20 0 chr17 21593831 21594126 -67910427 - AluSx SINE Alu -11 301 1 2025 159 88 14 chr17 21594126 21594522 -67910031 - L1MB7 LINE L1 -42 6142 5712 364 271 66 26 chr17 21594527 21594678 -67909875 - Charlie8 DNA MER1_type -2259 158 2 278 260 130 42 chr17 21594881 21595073 -67909480 - L1ME4a LINE L1 -81 6040 5832 2497 77 0 10 chr17 21596609 21596921 -67907632 + AluSc SINE Alu 1 309 0 2179 116 7 3 chr17 21597279 21597572 -67906981 + AluSx SINE Alu 1 294 -18 2223 95 0 36 chr17 21597689 21597995 -67906558 - AluSg SINE Alu -15 295 1 2157 109 17 0 chr17 21598000 21598294 -67906259 - AluSq SINE Alu 0 313 15 512 229 90 24 chr17 21598858 21599024 -67905529 + MER5B DNA MER1_type 1 177 -1 206 358 92 17 chr17 21599277 21599397 -67905156 - L2 LINE L2 -5 3308 3180 1433 149 0 0 chr17 21600903 21601124 -67903429 + AluJo SINE Alu 81 301 -11 713 286 56 44 chr17 21601744 21602355 -67902198 + L1ME3A LINE L1 1292 2012 -4516 * 2140 269 106 64 chr17 21602350 21602714 -67901839 + L1ME3A LINE L1 2842 3189 -3237 2069 113 3 0 chr17 21602714 21602998 -67901555 - AluSp SINE Alu -28 285 1 2140 269 106 64 chr17 21602998 21604767 -67899786 + L1ME3A LINE L1 3189 5072 -1354 2448 65 0 3 chr17 21604767 21605074 -67899479 + AluY SINE Alu 1 306 -5 2140 269 106 64 chr17 21605074 21605124 -67899429 + L1ME3A LINE L1 5072 5118 -1308 735 280 79 27 chr17 21605233 21605757 -67898796 + L1ME3A LINE L1 5602 6222 -228 1703 147 11 11 chr17 21605762 21606048 -67898505 + AluJb SINE Alu 6 291 -21 221 267 0 17 chr17 21606051 21606111 -67898442 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 1402 129 4 33 chr17 21609085 21609325 -67895228 + AluJo SINE Alu 6 238 -74 215 0 67 0 chr17 21609358 21609388 -67895165 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 510 258 19 7 chr17 21609546 21609701 -67894852 - L1ME LINE L1 -371 5750 5594 272 354 37 19 chr17 21611002 21611163 -67893390 + L2 LINE L2 2887 3050 -222 229 228 30 129 chr17 21611805 21611906 -67892647 + MER103 DNA DNA 16 106 -60 318 256 26 60 chr17 21612020 21612137 -67892416 + MIR SINE MIR 35 147 -115 * 319 258 25 67 chr17 21612135 21612255 -67892298 - L2 LINE L2 0 3272 3158 262 291 149 46 chr17 21616033 21616315 -67888238 - MLT1J2 LTR MaLR -139 311 1 585 287 207 0 chr17 21616982 21617306 -67887247 + MLT1G1 LTR MaLR 205 595 0 419 259 42 0 chr17 21618147 21618290 -67886263 - MLT1J1 LTR MaLR -277 169 21 1091 77 0 0 chr17 21618530 21618673 -67885880 - AluSg/x SINE Alu -21 291 149 1459 112 0 43 chr17 21618673 21618906 -67885647 + AluSg/x SINE Alu 84 306 -6 227 255 27 40 chr17 21619061 21619210 -67885343 + L1MC5 LINE L1 7782 7928 -33 388 291 178 21 chr17 21619817 21620199 -67884354 - L2 LINE L2 -2157 1157 716 401 243 178 30 chr17 21620200 21620402 -67884151 - L2 LINE L2 -2854 460 229 234 191 0 0 chr17 21621622 21621664 -67882889 + MIR SINE MIR 112 153 -109 183 312 13 39 chr17 21623014 21623091 -67881462 + MIR SINE MIR 111 185 -77 228 341 11 11 chr17 21623394 21623482 -67881071 - L2 LINE L2 -573 2741 2654 424 215 125 69 chr17 21623482 21623626 -67880927 + MLT1D LTR MaLR 5 156 -349 737 206 96 27 chr17 21623645 21623864 -67880689 + MLT1D LTR MaLR 272 505 0 245 248 97 76 chr17 21624729 21624965 -67879588 + L2 LINE L2 2794 3042 -271 272 244 39 5 chr17 21626581 21626677 -67877876 + MIR SINE MIR 90 254 -8 1187 310 158 25 chr17 21626805 21627444 -67877109 - L1ME3A LINE L1 -219 6020 5217 2016 123 13 28 chr17 21627444 21627761 -67876792 - AluJo SINE Alu 0 312 1 1187 310 158 25 chr17 21627761 21628053 -67876500 - L1ME3A LINE L1 -1022 5217 4965 1228 54 0 0 chr17 21628056 21628205 -67876348 + AluY SINE Alu 147 295 -16 1447 132 4 18 chr17 21628208 21628343 -67876210 + AluSx SINE Alu 1 133 -179 2194 110 10 0 chr17 21628343 21628651 -67875902 + AluSx SINE Alu 1 311 -1 1447 132 4 18 chr17 21628651 21628743 -67875810 + AluSx SINE Alu 133 225 -87 1529 233 106 97 chr17 21628750 21628914 -67875639 - L1ME3A LINE L1 -2089 4126 3965 2203 115 0 0 chr17 21628914 21629219 -67875334 - AluSx SINE Alu -7 305 1 1529 233 106 97 chr17 21629219 21629253 -67875300 - L1ME3A LINE L1 -2250 3965 3933 589 144 183 0 chr17 21629253 21629357 -67875196 - FLAM_C SINE Alu -10 123 1 1529 233 106 97 chr17 21629357 21629957 -67874596 - L1ME3A LINE L1 -2282 3933 3340 1905 171 0 0 chr17 21629957 21630266 -67874287 - AluJo SINE Alu -3 309 1 1529 233 106 97 chr17 21630266 21630428 -67874125 - L1ME3A LINE L1 -2875 3340 3181 1881 118 3 57 chr17 21630428 21630595 -67873958 - AluSq SINE Alu -15 298 154 2170 76 55 0 chr17 21630595 21630886 -67873667 - AluSp SINE Alu -6 307 1 1881 118 3 57 chr17 21630886 21631033 -67873520 - AluSq SINE Alu -159 154 1 2072 121 7 3 chr17 21631033 21631339 -67873214 - AluSg SINE Alu -3 307 1 1529 233 106 97 chr17 21631339 21631376 -67873177 - L1ME3A LINE L1 -3033 3182 3116 1955 117 7 17 chr17 21631521 21631821 -67872732 + AluSq SINE Alu 1 297 -16 2172 108 3 6 chr17 21631824 21632138 -67872415 + AluSp SINE Alu 1 313 0 650 210 36 31 chr17 21632153 21632377 -67872176 - L1ME3A LINE L1 -3140 3075 2851 344 205 24 12 chr17 21632604 21632687 -67871866 - L1ME2 LINE L1 -10 6154 6071 517 248 133 39 chr17 21632687 21632713 -67871840 - L1ME3A LINE L1 -4930 1466 1444 2215 103 0 3 chr17 21632713 21633014 -67871539 + AluSg1 SINE Alu 1 300 -9 517 248 133 39 chr17 21633014 21633394 -67871159 - L1ME3A LINE L1 -4952 1444 1022 1698 153 20 7 chr17 21633412 21633712 -67870841 + AluSx SINE Alu 1 304 -8 2341 61 0 17 chr17 21633714 21634010 -67870543 + AluY SINE Alu 1 291 -20 1910 163 0 0 chr17 21634258 21634558 -67869995 - AluJb SINE Alu -12 300 1 3295 253 131 22 chr17 21636323 21637883 -67866670 + L2 LINE L2 1537 3261 -52 304 175 0 0 chr17 21637908 21637965 -67866588 - MIR SINE MIR -109 153 97 504 292 161 25 chr17 21638749 21639023 -67865530 + L2 LINE L2 2924 3234 -38 3276 98 44 6 chr17 21639049 21639527 -67865026 + MER1A DNA MER1_type 34 529 0 25 0 0 0 chr17 21639901 21639926 -67864627 + AT_rich Low_complexity Low_complexity 1 25 0 254 231 0 0 chr17 21640021 21640073 -67864480 + MIR SINE MIR 124 175 -87 224 286 0 71 chr17 21641396 21641480 -67863073 - MIR3 SINE MIR -22 186 109 243 207 308 5 chr17 21641629 21641756 -67862797 - MIR SINE MIR -58 150 1 373 157 255 10 chr17 21643889 21643991 -67860562 + MIR SINE MIR 81 207 -55 22 0 0 0 chr17 21644013 21644035 -67860518 + AT_rich Low_complexity Low_complexity 1 22 0 265 318 45 8 chr17 21644106 21644238 -67860315 + L2 LINE L2 2914 3050 -222 235 300 22 11 chr17 21644284 21644374 -67860179 - L3 LINE CR1 -95 1482 1392 465 242 68 8 chr17 21644672 21644819 -67859734 - MIR SINE MIR -55 153 28 1148 180 57 2 chr17 21645054 21645403 -67859150 - LTR47A LTR ERVL -8 444 1 261 172 11 97 chr17 21645443 21645474 -67859079 - L1MB5 LINE L1 -9 6165 6133 2340 85 0 0 chr17 21645474 21645779 -67858774 - AluSq SINE Alu -8 305 1 261 172 11 97 chr17 21645779 21645840 -67858713 - L1MB5 LINE L1 -41 6133 6081 227 344 45 26 chr17 21645840 21645994 -67858559 + L2 LINE L2 2942 3098 -174 318 359 14 0 chr17 21646286 21646428 -67858125 + MIR3 SINE MIR 23 166 -42 420 215 48 39 chr17 21646560 21646695 -67857858 + MIR SINE MIR 38 173 -62 1306 150 29 20 chr17 21646830 21647076 -67857477 + AluJo SINE Alu 1 248 -64 460 313 42 38 chr17 21647212 21647474 -67857079 - L2 LINE L2 -140 3173 2911 681 200 17 74 chr17 21647494 21647669 -67856884 - MER63B DNA MER1_type -271 165 1 214 262 12 36 chr17 21647671 21647755 -67856798 - L2 LINE L2 -464 2850 2769 235 111 0 0 chr17 21647826 21647862 -67856691 + MER53 DNA DNA 1 36 -153 * 435 138 11 46 chr17 21647861 21647948 -67856605 - MER53 DNA DNA -83 106 23 * 504 92 11 46 chr17 21647873 21647960 -67856593 + MER53 DNA DNA 106 189 0 266 214 214 17 chr17 21648311 21648428 -67856125 - L2 LINE L2 -502 2812 2673 200 306 5 48 chr17 21649336 21649522 -67855031 + (TG)n Simple_repeat Simple_repeat 2 179 0 300 180 105 22 chr17 21649619 21649721 -67854832 - MIR SINE MIR -61 147 34 258 327 37 9 chr17 21650368 21650475 -67854078 - MIR SINE MIR -35 227 118 208 312 225 12 chr17 21650516 21650862 -67853691 + L2 LINE L2 2804 3223 -49 413 304 170 9 chr17 21651078 21651308 -67853245 + MLT1K LTR MaLR 7 273 -315 2005 114 26 23 chr17 21651551 21651857 -67852696 - AluSx SINE Alu -5 307 1 1047 83 0 0 chr17 21651857 21651989 -67852564 - AluSq/x SINE Alu -177 136 5 280 295 54 0 chr17 21652217 21652329 -67852224 - Charlie8 DNA MER1_type -1926 491 374 482 279 197 0 chr17 21652409 21652592 -67851961 - Charlie8 DNA MER1_type -2152 265 47 845 276 63 11 chr17 21652594 21652880 -67851673 + L1MC/D LINE L1 5522 5822 -1986 3924 131 66 84 chr17 21652884 21653182 -67851371 + L1MB7 LINE L1 5088 5390 -794 1880 162 7 0 chr17 21653182 21653472 -67851081 + AluSx SINE Alu 9 300 -12 3924 131 66 84 chr17 21653472 21653642 -67850911 + L1MB7 LINE L1 5390 5561 -623 1774 139 57 0 chr17 21653642 21653922 -67850631 + AluSx SINE Alu 1 296 -16 3924 131 66 84 chr17 21653922 21654404 -67850149 + L1MB7 LINE L1 5561 6011 -173 3006 120 61 113 chr17 21654404 21654657 -67849896 + MER4B LTR ERV1 1 266 -344 1600 87 39 97 chr17 21654657 21655003 -67849550 + AluSx SINE Alu 1 312 0 3006 120 61 113 chr17 21655003 21655393 -67849160 + MER4B LTR ERV1 266 610 0 3924 131 66 84 chr17 21655393 21655531 -67849022 + L1MB7 LINE L1 6011 6150 -34 180 188 0 0 chr17 21655808 21655840 -67848713 + L2 LINE L2 3281 3312 -1 426 348 76 0 chr17 21657651 21657835 -67846718 + MIR SINE MIR 64 261 -1 237 260 29 29 chr17 21658285 21658316 -67846237 - MIR3 SINE MIR -18 190 160 553 275 42 16 chr17 21658316 21658505 -67846048 - MER117 DNA MER1_type -3 194 1 237 260 29 29 chr17 21658505 21658577 -67845976 - MIR3 SINE MIR -47 161 87 213 291 0 64 chr17 21659984 21660094 -67844459 + G-rich Low_complexity Low_complexity 1 103 0 218 213 0 13 chr17 21660180 21660255 -67844298 + (CCCCAG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr17 21661602 21661635 -67842918 + AT_rich Low_complexity Low_complexity 1 33 0 307 139 155 0 chr17 21663888 21663979 -67840574 + MIR SINE MIR 77 196 -66 2096 110 0 10 chr17 21663987 21664288 -67840265 + AluSx SINE Alu 1 298 -14 314 219 157 0 chr17 21664347 21664468 -67840085 - MIR SINE MIR -62 146 8 243 387 73 8 chr17 21666190 21666438 -67838115 + L2 LINE L2 2636 2899 -415 264 327 84 0 chr17 21666472 21666579 -67837974 + L2 LINE L2 3127 3242 -30 1309 144 95 23 chr17 21666637 21666900 -67837653 - AluJo SINE Alu -30 282 1 203 293 69 0 chr17 21666901 21666959 -67837594 - L2 LINE L2 -13 3300 3239 967 262 27 0 chr17 21667198 21667419 -67837134 + MIR SINE MIR 32 258 -4 1259 237 159 34 chr17 21667490 21667937 -67836616 + MLT1J LTR MaLR 1 503 -8 386 320 92 40 chr17 21668352 21668602 -67835951 + LTR67 LTR ERVL 14 276 -281 795 301 158 8 chr17 21669108 21669470 -67835083 + LTR33 LTR ERVL 106 521 0 1263 220 108 74 chr17 21669710 21670210 -67834343 + LTR33 LTR ERVL 1 517 -4 687 216 20 0 chr17 21670731 21670879 -67833674 - MLT1B LTR MaLR -239 151 1 413 242 168 11 chr17 21671519 21671709 -67832844 - HAL1 LINE L1 -1107 1400 1181 * 4050 167 31 32 chr17 21671703 21672408 -67832145 - L1MC2 LINE L1 -303 6435 5713 1871 148 3 0 chr17 21672408 21672699 -67831854 - AluJb SINE Alu -17 295 4 4050 167 31 32 chr17 21672699 21673042 -67831511 - L1MC2 LINE L1 -1025 5713 5371 2459 221 27 30 chr17 21673067 21673275 -67831278 - L1MC2 LINE L1 -1886 4654 4447 1059 157 0 0 chr17 21673275 21673434 -67831119 + FRAM SINE Alu 1 159 -7 2459 221 27 30 chr17 21673434 21673899 -67830654 - L1MC2 LINE L1 -2093 4447 3983 825 234 0 0 chr17 21673910 21674085 -67830468 - AluJb SINE Alu -1 311 137 268 235 0 0 chr17 21674088 21674156 -67830397 - L1MC2 LINE L1 -2569 3971 3904 * 2955 189 40 43 chr17 21674139 21674367 -67830186 - L1MC2 LINE L1 -4660 1880 1653 2273 66 0 54 chr17 21674367 21674684 -67829869 - AluY SINE Alu -11 300 1 2955 189 40 43 chr17 21674684 21675332 -67829221 - L1MC2 LINE L1 -4887 1653 1007 1183 127 0 0 chr17 21675332 21675531 -67829022 - AluSx SINE Alu 0 314 116 358 91 152 0 chr17 21675531 21675597 -67828956 + MADE1 DNA Mariner 5 80 0 774 175 0 0 chr17 21675597 21675717 -67828836 - AluSx SINE Alu -192 121 2 3109 217 58 8 chr17 21675733 21676446 -67828107 - L1MC2 LINE L1 -5774 766 19 225 360 0 0 chr17 21676559 21676645 -67827908 - L2 LINE L2 -584 2730 2645 296 223 125 27 chr17 21677128 21677283 -67827270 + MIR SINE MIR 91 262 0 2225 95 7 0 chr17 21677533 21677837 -67826716 + AluSg SINE Alu 1 306 -4 246 238 110 43 chr17 21677842 21678025 -67826528 - MIR SINE MIR -8 254 23 248 202 37 138 chr17 21678768 21678877 -67825676 + MIR SINE MIR 91 188 -74 1078 148 0 16 chr17 21678890 21679059 -67825494 + AluSc SINE Alu 130 297 -12 2395 84 0 0 chr17 21679059 21679369 -67825184 + AluSg SINE Alu 1 310 0 1078 148 0 16 chr17 21679369 21679381 -67825172 + AluSc SINE Alu 297 308 -1 335 281 177 37 chr17 21679702 21680095 -67824458 + L2 LINE L2 2658 3091 -181 1456 124 49 17 chr17 21680192 21680626 -67823927 - LTR54 LTR ERV1 0 510 1 234 268 209 43 chr17 21680920 21681106 -67823447 + MIR SINE MIR 30 257 -5 502 258 139 88 chr17 21681594 21681924 -67822629 + L2 LINE L2 2926 3272 0 368 301 19 0 chr17 21681924 21682080 -67822473 + (TGGA)n Simple_repeat Simple_repeat 2 160 0 180 252 18 9 chr17 21682080 21682111 -67822442 + (TGAA)n Simple_repeat Simple_repeat 2 31 -82 2009 120 0 69 chr17 21682111 21682445 -67822108 + AluSx SINE Alu 1 311 -1 180 252 18 9 chr17 21682445 21682524 -67822029 + (TGAA)n Simple_repeat Simple_repeat 31 113 0 315 264 23 0 chr17 21682546 21682633 -67821920 + (TGGA)n Simple_repeat Simple_repeat 3 91 0 1718 154 137 20 chr17 21682649 21682999 -67821554 + MSTD LTR MaLR 5 395 -1 373 252 59 7 chr17 21683093 21683228 -67821325 - MIR3 SINE MIR -31 177 36 953 211 34 5 chr17 21683376 21683584 -67820969 + MIR SINE MIR 12 225 -37 278 306 0 0 chr17 21683685 21683783 -67820770 + (TG)n Simple_repeat Simple_repeat 1 98 0 204 200 0 0 chr17 21683940 21683985 -67820568 + (TG)n Simple_repeat Simple_repeat 1 45 0 1478 160 101 0 chr17 21685053 21685203 -67819350 - AluJb SINE Alu -17 295 162 420 20 0 0 chr17 21685203 21685252 -67819301 + (TG)n Simple_repeat Simple_repeat 2 50 0 1478 160 101 0 chr17 21685252 21685369 -67819184 - AluJb SINE Alu -150 162 1 438 209 11 0 chr17 21685394 21685485 -67819068 + L2 LINE L2 3178 3269 -3 226 200 36 0 chr17 21685982 21686037 -67818516 + L2 LINE L2 2637 2693 -621 976 295 113 13 chr17 21686041 21686583 -67817970 + MER45C DNA AcHobo 3 633 -320 1668 173 0 7 chr17 21686630 21686937 -67817616 + AluJb SINE Alu 1 305 0 2085 104 10 0 chr17 21686941 21687258 -67817295 + AluSp SINE Alu 1 313 0 221 337 36 0 chr17 21687644 21687727 -67816826 + L2 LINE L2 3209 3294 -19 212 367 92 0 chr17 21687770 21687879 -67816674 - MIR SINE MIR -74 134 16 236 209 0 0 chr17 21688953 21688996 -67815557 + L2 LINE L2 3230 3272 0 208 214 54 0 chr17 21689170 21689226 -67815327 + CT-rich Low_complexity Low_complexity 5 63 0 208 282 0 58 chr17 21689951 21690054 -67814499 + L3 LINE CR1 1304 1400 -177 416 327 65 9 chr17 21690205 21690422 -67814131 - MIR SINE MIR -32 230 2 228 348 123 14 chr17 21695921 21696059 -67808494 - MIR3 SINE MIR -54 154 2 363 367 58 9 chr17 21696594 21696820 -67807733 - MIR SINE MIR -4 258 22 238 319 30 74 chr17 21697094 21697229 -67807324 + MLT1J2 LTR MaLR 266 394 -56 1910 243 78 37 chr17 21697438 21697819 -67806734 - MER67C LTR ERV1 0 710 287 2187 93 0 3 chr17 21697819 21698110 -67806443 + AluSg SINE Alu 1 290 -20 1910 243 78 37 chr17 21698110 21698410 -67806143 - MER67C LTR ERV1 -423 287 1 2002 86 0 7 chr17 21698431 21698711 -67805842 - AluY SINE Alu -8 303 26 304 28 0 0 chr17 21698729 21698765 -67805788 + (TTTA)n Simple_repeat Simple_repeat 2 120 0 2201 71 7 0 chr17 21698765 21699045 -67805508 - AluY SINE Alu -29 282 1 1896 149 32 18 chr17 21699155 21699497 -67805056 - MLT1A1 LTR MaLR -9 356 10 2244 104 3 0 chr17 21699802 21700109 -67804444 - AluSp SINE Alu -5 308 1 1943 85 0 39 chr17 21700662 21700772 -67803781 + AluSq SINE Alu 34 147 -166 2048 103 0 3 chr17 21700772 21701054 -67803499 + AluSc SINE Alu 15 295 -14 1943 85 0 39 chr17 21701054 21701224 -67803329 + AluSq SINE Alu 147 303 -10 1996 132 0 0 chr17 21702517 21702820 -67801733 + AluSx SINE Alu 1 303 -9 803 186 23 17 chr17 21702975 21703147 -67801406 - AluJb SINE Alu -3 309 137 2441 149 41 43 chr17 21703441 21703952 -67800601 - LTR54 LTR ERV1 0 510 1 2308 131 50 69 chr17 21704025 21704461 -67800092 - MSTA LTR MaLR 0 428 1 3543 134 31 22 chr17 21704667 21705215 -67799338 - LTR49 LTR ERV1 -2 593 38 2170 76 28 0 chr17 21705215 21705341 -67799212 + AluY SINE Alu 1 122 -189 381 43 0 0 chr17 21705341 21705388 -67799165 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 2170 76 28 0 chr17 21705388 21705549 -67799004 + AluY SINE Alu 122 296 -15 3543 134 31 22 chr17 21705549 21705588 -67798965 - LTR49 LTR ERV1 -557 38 1 1227 145 17 54 chr17 21705610 21705645 -67798908 - LTR49-int LTR ERV1 -15 6316 6281 1843 142 7 7 chr17 21705645 21705941 -67798612 + AluSx SINE Alu 1 296 -16 1227 145 17 54 chr17 21705941 21706146 -67798407 - LTR49-int LTR ERV1 -50 6281 6085 1736 126 0 4 chr17 21706152 21706407 -67798146 - AluSx SINE Alu -58 254 1 1858 108 10 6 chr17 21706407 21706802 -67797751 - LTR49-int LTR ERV1 -391 5940 5501 1139 139 0 16 chr17 21706814 21707001 -67797552 + AluSg/x SINE Alu 127 310 0 3848 197 64 60 chr17 21707001 21707063 -67797490 - LTR49-int LTR ERV1 -3805 2526 2466 2018 120 0 13 chr17 21707063 21707363 -67797190 - AluSq SINE Alu -17 296 1 3848 197 64 60 chr17 21707363 21707428 -67797125 - LTR49-int LTR ERV1 -3865 2466 2403 2231 71 27 0 chr17 21707428 21707723 -67796830 - AluSp SINE Alu -10 303 1 3848 197 64 60 chr17 21707723 21708282 -67796271 - LTR49-int LTR ERV1 -3928 2403 1848 1980 103 65 0 chr17 21708282 21708574 -67795979 + AluSx SINE Alu 1 311 -1 3848 197 64 60 chr17 21708574 21708676 -67795877 - LTR49-int LTR ERV1 -4483 1848 1748 325 70 35 0 chr17 21708676 21708733 -67795820 + (CA)n Simple_repeat Simple_repeat 2 60 0 3848 197 64 60 chr17 21708733 21708955 -67795598 - LTR49-int LTR ERV1 -4583 1748 1509 2104 137 12 63 chr17 21708956 21709182 -67795371 - LTR49-int LTR ERV1 -4989 1342 1145 1941 132 3 0 chr17 21709182 21709470 -67795083 - AluSx SINE Alu -21 291 3 2104 137 12 63 chr17 21709470 21709658 -67794895 - LTR49-int LTR ERV1 -5186 1145 949 1564 114 76 15 chr17 21709655 21709919 -67794634 - LTR49-int LTR ERV1 -6030 301 22 * 277 279 130 48 chr17 21710032 21710151 -67794402 + LTR34 LTR ERV1 274 382 -317 3262 112 93 35 chr17 21710151 21710275 -67794278 - LTR24C LTR ERV1 0 635 520 2051 89 3 14 chr17 21710275 21710568 -67793985 + AluSc SINE Alu 1 290 -19 3262 112 93 35 chr17 21710568 21711043 -67793510 - LTR24C LTR ERV1 -115 520 1 277 279 130 48 chr17 21711043 21711131 -67793422 + LTR34 LTR ERV1 382 498 -201 3083 164 53 6 chr17 21711336 21711902 -67792651 - LTR49 LTR ERV1 -2 651 1 3664 184 56 54 chr17 21711909 21712766 -67791787 + MER21B LTR ERV1 3 861 -2 4615 98 29 5 chr17 21712918 21713147 -67791406 + PABL_B LTR ERV1 1 223 -444 1933 136 3 10 chr17 21713147 21713448 -67791105 - AluSx SINE Alu -13 299 1 4615 98 29 5 chr17 21713448 21713466 -67791087 + PABL_B LTR ERV1 223 239 -428 2331 90 0 3 chr17 21713466 21713776 -67790777 - AluSq SINE Alu -4 309 1 4615 98 29 5 chr17 21713776 21714178 -67790375 + PABL_B LTR ERV1 239 667 0 1912 152 7 0 chr17 21714291 21714593 -67789960 + AluSx SINE Alu 1 304 -8 2144 145 87 79 chr17 21714685 21715190 -67789363 + LTR54 LTR ERV1 1 509 -1 1409 130 5 9 chr17 21715481 21715697 -67788856 + MER4D LTR ERV1 1 215 -688 1186 118 0 22 chr17 21715698 21715876 -67788677 - AluSg/x SINE Alu -16 296 123 3949 137 56 21 chr17 21715876 21716366 -67788187 + MER4D LTR ERV1 206 728 -175 2071 120 0 0 chr17 21716366 21716650 -67787903 - AluSg SINE Alu -26 284 1 3949 137 56 21 chr17 21716650 21716833 -67787720 + MER4D LTR ERV1 728 903 0 1438 233 51 24 chr17 21717654 21718207 -67786346 - L1MDa LINE L1 -3451 2931 2364 247 277 47 64 chr17 21718269 21718504 -67786049 - L1MDa LINE L1 -4862 1520 1290 2141 138 151 0 chr17 21718525 21718895 -67785658 + MSTA LTR MaLR 3 428 0 9386 162 29 14 chr17 21718895 21718941 -67785612 + MSTA-int LTR MaLR 1 45 -1606 6519 79 7 52 chr17 21718941 21720679 -67783874 + SVA Other Other 2 1385 -1 9386 162 29 14 chr17 21720679 21722256 -67782297 + MSTA-int LTR MaLR 45 1651 0 2198 119 132 26 chr17 21722256 21722570 -67781983 + MSTA LTR MaLR 1 365 -63 2227 105 3 0 chr17 21722570 21722874 -67781679 - AluSq SINE Alu -8 305 1 2198 119 132 26 chr17 21722874 21722946 -67781607 + MSTA LTR MaLR 365 428 0 310 284 12 12 chr17 21723011 21723173 -67781380 - L1MDa LINE L1 -5423 1140 979 1414 117 8 17 chr17 21723179 21723419 -67781134 - L1MB3 LINE L1 0 6183 5946 1950 226 80 42 chr17 21723466 21724172 -67780381 - L1M4 LINE L1 -4521 1792 993 766 216 26 71 chr17 21725131 21725399 -67779154 - L1M3e LINE L1 -4957 2073 1818 905 331 73 17 chr17 21725803 21726211 -67778342 - L1M3e LINE L1 -5710 1327 897 1593 153 112 70 chr17 21726331 21726555 -67777998 - MSTB1 LTR MaLR -12 420 172 1166 179 75 101 chr17 21726555 21726863 -67777690 - AluJo SINE Alu -2 300 1 1593 153 112 70 chr17 21726863 21727023 -67777530 - MSTB1 LTR MaLR -260 172 20 1810 232 9 27 chr17 21727059 21727508 -67777045 + LTR47B LTR ERVL 1 441 -2 1935 183 55 48 chr17 21727655 21728113 -67776440 + MLT1C LTR MaLR 1 461 -6 279 335 1 0 chr17 21728155 21728268 -67776285 + L1ME LINE L1 5481 5594 -527 1914 96 59 40 chr17 21728583 21728886 -67775667 + AluSg SINE Alu 1 309 -1 2250 109 0 3 chr17 21728893 21729206 -67775347 + AluSx SINE Alu 1 312 0 1433 203 17 3 chr17 21729545 21729661 -67774892 + AluJo SINE Alu 1 114 -198 216 0 0 0 chr17 21729661 21729685 -67774868 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1433 203 17 3 chr17 21729685 21729868 -67774685 + AluJo SINE Alu 114 304 -8 2102 72 7 4 chr17 21729948 21730284 -67774269 - AluY SINE Alu 0 338 2 2200 144 70 15 chr17 21731061 21731463 -67773090 + MSTB LTR MaLR 3 426 0 795 131 48 136 chr17 21732435 21732652 -67771901 + LTR34 LTR ERV1 1 198 -390 544 166 194 22 chr17 21732673 21732812 -67771741 - MER4C LTR ERV1 0 465 303 1889 122 21 77 chr17 21732881 21733259 -67771294 - MER4A LTR ERV1 -307 357 1 2685 145 42 14 chr17 21733278 21733760 -67770793 + LTR34 LTR ERV1 205 699 0 4213 114 34 50 chr17 21733842 21733978 -67770575 - LTR8A LTR ERV1 0 727 590 2013 118 0 22 chr17 21733978 21734291 -67770262 + AluSx SINE Alu 1 306 -6 4213 114 34 50 chr17 21734291 21734893 -67769660 - LTR8A LTR ERV1 -137 590 1 1213 222 4 4 chr17 21734998 21735237 -67769316 - MER8 DNA MER2_type 0 239 1 2106 106 8 98 chr17 21735267 21735653 -67768900 - MER4B LTR ERV1 -259 351 1 2198 92 10 0 chr17 21735745 21736038 -67768515 - AluSx SINE Alu -16 296 1 2346 74 26 3 chr17 21736593 21736983 -67767570 - LTR7 LTR ERV1 -7 443 1 5280 108 14 14 chr17 21737150 21737929 -67766624 + MER4E LTR ERV1 1 779 0 1807 141 25 0 chr17 21738369 21738653 -67765900 - AluJo SINE Alu -16 296 6 219 361 52 10 chr17 21739058 21739155 -67765398 + MIR SINE MIR 48 148 -114 3068 161 56 192 chr17 21739282 21740294 -67764259 + MSTB-int LTR MaLR 397 1271 -309 1025 162 0 22 chr17 21740294 21740473 -67764080 - AluJb SINE Alu 0 312 138 532 132 60 6 chr17 21740475 21740642 -67763911 + (TA)n Simple_repeat Simple_repeat 1 176 0 771 185 0 0 chr17 21740642 21740761 -67763792 - FLAM_C SINE Alu -23 120 2 1930 123 14 80 chr17 21740762 21741029 -67763524 + MSTB-int LTR MaLR 1325 1565 -86 1863 144 3 0 chr17 21741029 21741321 -67763232 + AluSx SINE Alu 1 293 -19 1930 123 14 80 chr17 21741321 21741403 -67763150 + MSTB-int LTR MaLR 1565 1651 0 2113 153 79 27 chr17 21741403 21741752 -67762801 + MSTB LTR MaLR 1 375 -51 427 136 12 25 chr17 21741752 21741833 -67762720 - MADE1 DNA Mariner 0 80 1 2113 153 79 27 chr17 21741833 21741888 -67762665 + MSTB LTR MaLR 375 426 0 2277 102 0 0 chr17 21741988 21742292 -67762261 + AluSp SINE Alu 2 305 -8 931 251 95 3 chr17 21742658 21742953 -67761600 - L1ME2 LINE L1 -171 5993 5672 2045 101 18 0 chr17 21743283 21743569 -67760984 + AluSx SINE Alu 1 291 -21 1228 167 67 106 chr17 21743632 21744093 -67760460 - LTR47B LTR ERVL 0 443 1 1624 174 17 53 chr17 21744348 21744438 -67760115 - MER74A LTR ERVL 0 558 466 1948 126 3 13 chr17 21744438 21744740 -67759813 + AluSq SINE Alu 5 303 -10 1624 174 17 53 chr17 21744740 21744751 -67759802 - MER74A LTR ERVL -92 466 456 1571 132 83 31 chr17 21744751 21745040 -67759513 + AluJb SINE Alu 1 304 -8 1624 174 17 53 chr17 21745040 21745293 -67759260 - MER74A LTR ERVL -102 456 216 2331 74 0 0 chr17 21745793 21746090 -67758463 - AluSg SINE Alu -13 297 1 1908 118 54 0 chr17 21746093 21746372 -67758181 - AluSx SINE Alu -18 294 1 1510 128 23 122 chr17 21746372 21746716 -67757837 - AluYb8 SINE Alu -7 311 1 828 121 0 32 chr17 21746719 21746843 -67757710 - AluSq/x SINE Alu -180 133 14 2062 94 10 26 chr17 21746958 21747267 -67757286 + AluSc SINE Alu 1 304 -5 293 302 86 0 chr17 21747281 21747397 -67757156 - MIR3 SINE MIR -35 173 48 1957 122 3 7 chr17 21747430 21747726 -67756827 - AluSq SINE Alu -18 295 1 2402 48 3 0 chr17 21747962 21748257 -67756296 - AluY SINE Alu -15 296 1 1706 155 0 0 chr17 21748262 21748540 -67756013 - AluJo SINE Alu -21 291 14 285 355 0 45 chr17 21748544 21748654 -67755899 + L2 LINE L2 3209 3313 0 3489 175 42 61 chr17 21749639 21749663 -67754890 - L1MB8 LINE L1 -7 6407 6384 2578 61 0 13 chr17 21749663 21749975 -67754578 + AluSp SINE Alu 1 308 -5 3489 175 42 61 chr17 21749975 21750216 -67754337 - L1MB8 LINE L1 -30 6384 6140 2107 118 4 0 chr17 21750216 21750495 -67754058 + AluSq SINE Alu 1 280 -33 279 0 0 0 chr17 21750495 21750526 -67754027 + (CA)n Simple_repeat Simple_repeat 1 31 0 3489 175 42 61 chr17 21750526 21751078 -67753475 - L1MB8 LINE L1 -273 6141 5580 231 114 0 0 chr17 21751078 21751113 -67753440 + (TA)n Simple_repeat Simple_repeat 2 36 0 2174 86 3 33 chr17 21751113 21751414 -67753139 - AluSq SINE Alu -21 292 1 3489 175 42 61 chr17 21751414 21751516 -67753037 - L1MB8 LINE L1 -832 5582 5501 1930 156 33 0 chr17 21751521 21751854 -67752699 + MSTB LTR MaLR 83 426 0 6335 209 64 54 chr17 21751854 21752777 -67751776 - L1MB8 LINE L1 -877 5505 4593 840 128 30 30 chr17 21752777 21752910 -67751643 - FLAM_C SINE Alu 0 133 1 6335 209 64 54 chr17 21752910 21752941 -67751612 - L1MB8 LINE L1 -1789 4593 4564 2550 78 0 0 chr17 21752941 21753249 -67751304 + AluSc SINE Alu 1 308 -1 6335 209 64 54 chr17 21753249 21753562 -67750991 - L1MB8 LINE L1 -1818 4564 4256 12089 32 1 18 chr17 21753562 21754972 -67749581 + SVA Other Other 1 1386 0 6335 209 64 54 chr17 21754972 21755622 -67748931 - L1MB8 LINE L1 -2126 4256 3567 704 183 106 95 chr17 21755676 21755807 -67748746 - L1MB8 LINE L1 -3453 2929 2801 2228 112 3 0 chr17 21755807 21756103 -67748450 + AluSp SINE Alu 1 297 -16 704 183 106 95 chr17 21756103 21756244 -67748309 - L1MB8 LINE L1 -3581 2801 2654 1747 144 17 50 chr17 21756253 21756701 -67747852 - Tigger5 DNA MER2_type 0 2323 1 732 165 8 15 chr17 21756736 21756869 -67747684 - FRAM SINE Alu -1 175 44 2066 119 7 0 chr17 21756895 21757173 -67747380 - AluSx SINE Alu -32 280 1 292 200 42 11 chr17 21757184 21757279 -67747274 - L1MB8 LINE L1 -4028 2356 2259 321 189 0 0 chr17 21757301 21757375 -67747178 - L1MA9 LINE L1 -176 6136 6063 * 3015 134 19 74 chr17 21757373 21757528 -67747025 - L1M2 LINE L1 -743 5403 5241 1886 155 13 13 chr17 21757528 21757831 -67746722 - AluSx SINE Alu -9 303 1 3015 134 19 74 chr17 21757831 21757892 -67746661 - L1M2 LINE L1 -905 5241 5178 1853 132 46 30 chr17 21757892 21758195 -67746358 + AluSx SINE Alu 1 308 -4 3015 134 19 74 chr17 21758195 21758778 -67745775 - L1M2 LINE L1 -968 5178 4734 1183 200 59 0 chr17 21758780 21759000 -67745553 - AluJo SINE Alu -8 304 72 799 118 30 0 chr17 21759000 21759135 -67745418 - L1M2 LINE L1 -1401 4745 4607 2207 113 36 3 chr17 21759136 21759437 -67745116 + AluSq SINE Alu 1 311 -2 2474 72 0 20 chr17 21759447 21759753 -67744800 + AluY SINE Alu 1 300 -11 2216 119 19 10 chr17 21759755 21759876 -67744677 + AluSp SINE Alu 1 119 -194 237 98 0 0 chr17 21759876 21759917 -67744636 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2216 119 19 10 chr17 21759917 21760105 -67744448 + AluSp SINE Alu 119 313 0 2380 99 0 3 chr17 21760204 21760508 -67744045 + AluSx SINE Alu 1 303 -9 993 172 0 23 chr17 21760511 21760685 -67743868 + LTR39 LTR ERV1 614 783 0 1939 256 52 25 chr17 21760686 21760890 -67743663 - L1 LINE L1 -2981 3165 2968 5619 127 16 25 chr17 21760890 21761442 -67743111 + MER4D LTR ERV1 1 543 -360 2163 121 13 10 chr17 21761442 21761747 -67742806 - AluSx SINE Alu -6 306 1 5619 127 16 25 chr17 21761747 21762105 -67742448 + MER4D LTR ERV1 543 903 0 2167 117 17 10 chr17 21762110 21762409 -67742144 - AluSx SINE Alu -11 301 1 1939 256 52 25 chr17 21762409 21762736 -67741817 - L1 LINE L1 -3181 2965 2600 2355 86 10 0 chr17 21762736 21763039 -67741514 - AluSp SINE Alu -7 306 1 1939 256 52 25 chr17 21763039 21763255 -67741298 - L1 LINE L1 -3546 2600 2391 2155 270 56 62 chr17 21763363 21763666 -67740887 - HERV16 LTR ERVL -3642 1354 1051 2457 90 0 0 chr17 21763666 21763967 -67740586 - AluSc SINE Alu -8 301 1 2155 270 56 62 chr17 21763967 21764525 -67740028 - HERV16 LTR ERVL -3945 1051 497 2098 95 3 7 chr17 21764525 21764808 -67739745 - AluSp SINE Alu -2 311 30 2155 270 56 62 chr17 21764808 21764976 -67739577 - HERV16 LTR ERVL -4499 497 330 542 268 32 13 chr17 21765072 21765229 -67739324 - HERV16 LTR ERVL -4828 168 9 661 198 80 0 chr17 21765237 21765399 -67739154 - LTR16A LTR ERVL -1 449 275 363 280 10 0 chr17 21765455 21765555 -67738998 - LTR16A LTR ERVL -324 126 26 343 239 34 148 chr17 21765839 21765881 -67738672 - MER5B DNA MER1_type -3 175 130 2333 105 0 3 chr17 21765881 21766194 -67738359 - AluSx SINE Alu 0 312 1 343 239 34 148 chr17 21766194 21766327 -67738226 - MER5B DNA MER1_type -48 130 20 295 292 21 10 chr17 21766363 21766459 -67738094 - MIR SINE MIR -61 147 51 965 152 6 62 chr17 21767123 21767301 -67737252 + FAM SINE Alu 1 168 -7 2477 42 0 3 chr17 21767312 21767600 -67736953 + AluY SINE Alu 1 287 -24 585 42 0 0 chr17 21767609 21767681 -67736872 + (GA)n Simple_repeat Simple_repeat 2 73 0 357 117 83 0 chr17 21768382 21768442 -67736111 - MSTB1 LTR MaLR 0 432 368 1804 137 0 0 chr17 21768447 21768696 -67735857 + AluSx SINE Alu 1 249 -63 776 102 0 0 chr17 21768696 21768794 -67735759 - AluSg SINE Alu -211 99 2 2413 64 0 68 chr17 21768829 21769155 -67735398 - AluY SINE Alu -7 304 1 2479 68 14 0 chr17 21769610 21769904 -67734649 - AluSp SINE Alu -15 298 1 725 116 192 27 chr17 21770118 21770264 -67734289 + MLT1B LTR MaLR 1 170 -220 1499 191 62 35 chr17 21770486 21770826 -67733727 + MSTD LTR MaLR 1 349 -47 797 299 88 52 chr17 21770898 21771479 -67733074 + L1M4 LINE L1 3 604 -5938 2389 101 0 0 chr17 21771479 21771786 -67732767 + AluSc SINE Alu 1 307 -2 2164 101 30 0 chr17 21771795 21772091 -67732462 + AluSx SINE Alu 1 305 -7 259 73 24 0 chr17 21772095 21772136 -67732417 + L1MB7 LINE L1 5738 5779 -399 1860 74 22 0 chr17 21772136 21772366 -67732187 + AluSx SINE Alu 1 235 -77 514 198 0 0 chr17 21772366 21772457 -67732096 + L1MB7 LINE L1 5898 5988 -190 818 204 131 80 chr17 21772471 21772888 -67731665 + MLT2B1 LTR ERVL 1 414 0 535 139 243 7 chr17 21772889 21773033 -67731520 + L1MB7 LINE L1 5998 6175 -9 426 96 0 0 chr17 21773647 21773720 -67730833 + (CTG)n Simple_repeat Simple_repeat 3 75 0 840 174 0 0 chr17 21774515 21774647 -67729906 + FLAM_C SINE Alu 2 133 0 2288 105 3 0 chr17 21774725 21775021 -67729532 + AluSx SINE Alu 1 297 -15 1265 223 97 35 chr17 21776416 21776789 -67727764 + MSTD LTR MaLR 1 396 0 596 256 48 1 chr17 21776859 21777025 -67727528 - MIR SINE MIR -37 171 30 2067 135 0 0 chr17 21777114 21777428 -67727125 - AluSx SINE Alu 0 314 1 2119 113 61 0 chr17 21777480 21777773 -67726780 + AluSx SINE Alu 1 311 -1 2205 93 0 4 chr17 21778659 21778964 -67725589 - AluSc SINE Alu 0 304 1 2291 120 3 0 chr17 21779959 21780268 -67724285 + AluJb SINE Alu 1 310 -2 915 140 14 14 chr17 21780297 21780440 -67724113 + AluJo SINE Alu 1 143 -169 1468 94 0 0 chr17 21780443 21780624 -67723929 + AluSg SINE Alu 4 184 -126 238 97 0 0 chr17 21780625 21780656 -67723897 + AluSg SINE Alu 219 249 -52 1043 191 33 9 chr17 21780656 21780866 -67723687 + AluJo SINE Alu 85 299 -13 383 320 44 61 chr17 21781275 21781456 -67723097 - L1ME LINE L1 -521 5600 5423 2383 71 40 0 chr17 21781465 21781761 -67722792 + AluY SINE Alu 1 308 -3 609 190 61 25 chr17 21781827 21781990 -67722563 + MER96B DNA MER1_type? 1 169 -248 887 146 8 0 chr17 21782083 21782213 -67722340 - AluSq/x SINE Alu -181 131 1 1760 166 16 50 chr17 21782425 21782744 -67721809 + AluJo SINE Alu 1 308 -4 282 137 39 0 chr17 21782762 21782813 -67721740 - Alu SINE Alu -247 53 1 214 29 57 0 chr17 21782818 21782853 -67721700 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 2416 84 3 7 chr17 21782857 21783165 -67721388 - AluSq SINE Alu -1 312 6 8470 54 4 0 chr17 21783212 21784177 -67720376 - LTR5 LTR ERVK 0 969 1 928 181 18 6 chr17 21784257 21784423 -67720130 - AluJb SINE Alu -14 298 131 1910 150 7 0 chr17 21784462 21784756 -67719797 + AluSx SINE Alu 1 296 -16 2234 112 3 0 chr17 21784893 21785188 -67719365 + AluSx SINE Alu 1 296 -16 2204 84 0 39 chr17 21785188 21785496 -67719057 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr17 21785611 21785641 -67718912 + GC_rich Low_complexity Low_complexity 1 30 0 245 207 0 103 chr17 21785750 21785866 -67718687 + C-rich Low_complexity Low_complexity 2 105 0 627 42 0 0 chr17 21786435 21786507 -67718046 + tRNA-Trp tRNA tRNA 1 72 -3 617 285 68 50 chr17 21787128 21787630 -67716923 + L1MEd LINE L1 505 1015 -5104 1806 135 82 7 chr17 21787709 21787991 -67716562 + AluJo SINE Alu 1 303 -9 2002 83 4 4 chr17 21787993 21788247 -67716306 + AluSp SINE Alu 50 303 -10 1123 155 103 94 chr17 21788247 21788374 -67716179 - MER4D LTR ERV1 -576 327 203 1987 100 86 10 chr17 21788374 21788665 -67715888 - AluSq SINE Alu 0 313 1 1123 155 103 94 chr17 21788665 21788841 -67715712 - MER4D LTR ERV1 -700 203 26 2477 60 17 0 chr17 21788841 21789141 -67715412 - AluY SINE Alu -6 305 1 1123 155 103 94 chr17 21789141 21789168 -67715385 - MER4D LTR ERV1 -877 26 1 247 287 40 20 chr17 21789705 21789806 -67714747 + L1ME4a LINE L1 5970 6072 -49 741 252 22 82 chr17 21789816 21790086 -67714467 + MIR SINE MIR 1 254 -8 4335 133 53 102 chr17 21790106 21790128 -67714425 + MER4D LTR ERV1 1 23 -880 1916 161 0 31 chr17 21790128 21790450 -67714103 + AluJo SINE Alu 1 312 0 4335 133 53 102 chr17 21790450 21790642 -67713911 + MER4D LTR ERV1 23 223 -680 2461 96 0 0 chr17 21790642 21790954 -67713599 + AluSq SINE Alu 1 312 -1 4335 133 53 102 chr17 21790954 21791091 -67713462 + MER4D LTR ERV1 223 365 -538 216 0 0 0 chr17 21791091 21791115 -67713438 + (TA)n Simple_repeat Simple_repeat 2 25 0 2398 116 0 0 chr17 21791115 21791425 -67713128 - AluSq SINE Alu -3 310 1 4335 133 53 102 chr17 21791425 21792017 -67712536 + MER4D LTR ERV1 363 900 -3 1509 158 79 93 chr17 21792415 21792986 -67711567 - Charlie2 DNA MER1_type -16 2846 2284 2098 103 3 28 chr17 21793161 21793452 -67711101 - AluSx SINE Alu -15 297 14 1839 129 47 4 chr17 21793865 21794143 -67710410 - AluSx SINE Alu -22 290 1 602 213 0 9 chr17 21794276 21794384 -67710169 + FLAM_C SINE Alu 2 108 -35 1450 205 17 3 chr17 21794399 21794687 -67709866 - AluJo SINE Alu -20 292 1 47 0 0 0 chr17 21794690 21794737 -67709816 + AT_rich Low_complexity Low_complexity 1 47 0 1481 167 49 24 chr17 21794737 21795024 -67709529 + AluJo SINE Alu 12 305 -7 272 250 56 56 chr17 21795256 21795335 -67709218 + MER20B DNA MER1_type 674 755 -28 2350 100 0 7 chr17 21795335 21795636 -67708917 + AluSx SINE Alu 1 299 -13 272 250 56 56 chr17 21795636 21795664 -67708889 + MER20B DNA MER1_type 754 781 -2 2106 144 0 0 chr17 21795731 21796043 -67708510 + AluSx SINE Alu 1 312 0 357 200 0 0 chr17 21796043 21796113 -67708440 + L1M4 LINE L1 5049 5118 -1028 1972 149 7 3 chr17 21796206 21796501 -67708052 + AluSx SINE Alu 1 296 -16 395 157 0 0 chr17 21796502 21796572 -67707981 + L1M4 LINE L1 5362 5431 -753 1817 145 13 44 chr17 21797004 21797321 -67707232 - AluJb SINE Alu -5 307 1 197 269 185 76 chr17 21798076 21798195 -67706358 - MIR3 SINE MIR -37 171 40 1925 135 48 0 chr17 21798455 21798744 -67705809 - AluSx SINE Alu -9 303 1 2372 97 0 13 chr17 21798751 21799060 -67705493 - AluSx SINE Alu -7 305 1 2675 106 3 13 chr17 21799242 21799621 -67704932 - THE1C LTR MaLR 0 375 1 210 37 0 0 chr17 21800188 21800215 -67704338 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1684 145 14 40 chr17 21800579 21800876 -67703677 - AluJb SINE Alu -10 302 14 274 301 54 0 chr17 21801204 21801297 -67703256 + MER94 DNA DNA 2 99 -35 200 310 69 0 chr17 21801578 21801636 -67702917 - L2 LINE L2 -4 3268 3207 295 356 17 8 chr17 21801768 21801886 -67702667 + MIR3 SINE MIR 70 188 -20 2143 197 101 32 chr17 21801890 21802397 -67702156 - MLT1F LTR MaLR 0 542 1 1829 139 9 22 chr17 21802869 21803185 -67701368 - AluSx SINE Alu 0 312 1 276 128 0 0 chr17 21803435 21803474 -67701079 + AluSx SINE Alu 6 44 -257 2163 86 0 43 chr17 21803795 21804120 -67700433 + AluY SINE Alu 1 311 0 698 101 16 78 chr17 21804124 21804253 -67700300 - FLAM_C SINE Alu -21 122 2 290 343 95 0 chr17 21804255 21804392 -67700161 - MIR SINE MIR -68 194 45 187 211 0 0 chr17 21804813 21804851 -67699702 + MIR SINE MIR 108 145 -117 1767 102 0 0 chr17 21805116 21805351 -67699202 + AluSx SINE Alu 33 267 -45 558 167 208 17 chr17 21805484 21805604 -67698949 - FLAM_C SINE Alu 0 143 1 2261 72 0 33 chr17 21805648 21805955 -67698598 - AluSx SINE Alu -15 297 1 1994 139 0 3 chr17 21805962 21806257 -67698296 - AluSg SINE Alu -16 294 1 2446 68 0 6 chr17 21806378 21806689 -67697864 - AluSg1 SINE Alu 0 309 1 2441 55 7 7 chr17 21806800 21807110 -67697443 - AluY SINE Alu -1 310 1 2141 69 34 10 chr17 21807437 21807728 -67696825 + AluY SINE Alu 1 298 -13 230 251 22 19 chr17 21807884 21807991 -67696562 - MIR SINE MIR -62 146 45 184 313 60 0 chr17 21808198 21808281 -67696272 + MIR SINE MIR 60 147 -61 450 94 0 0 chr17 21808658 21808722 -67695831 + (CA)n Simple_repeat Simple_repeat 2 65 0 1450 126 20 157 chr17 21809082 21809432 -67695121 - AluYb8 SINE Alu -16 302 1 245 320 141 6 chr17 21809450 21809606 -67694947 + L2 LINE L2 2923 3099 -173 213 227 31 41 chr17 21809923 21810020 -67694533 + (CCCG)n Simple_repeat Simple_repeat 4 99 0 262 246 14 0 chr17 21810286 21810355 -67694198 - L2 LINE L2 -203 3069 3000 238 313 0 0 chr17 21810370 21810437 -67694116 - L2 LINE L2 0 3272 3206 233 296 136 0 chr17 21810538 21810626 -67693927 - MIR SINE MIR -111 151 52 257 338 13 0 chr17 21811049 21811126 -67693427 - MIR3 SINE MIR -50 158 81 481 285 165 66 chr17 21811218 21811642 -67692911 + LTR16C LTR ERVL 26 491 0 537 342 58 26 chr17 21811645 21811987 -67692566 - L2 LINE L2 0 3272 2920 391 271 86 29 chr17 21812272 21812412 -67692141 - MIR SINE MIR -66 196 49 2176 88 34 0 chr17 21812420 21812716 -67691837 + AluSx SINE Alu 1 306 -6 2165 95 20 0 chr17 21812716 21813010 -67691543 + AluY SINE Alu 1 302 -9 180 0 0 0 chr17 21813014 21813034 -67691519 + (CAA)n Simple_repeat Simple_repeat 2 21 0 677 296 15 10 chr17 21813267 21813473 -67691080 + MIR SINE MIR 50 256 -6 596 238 52 43 chr17 21813487 21813728 -67690825 + MIR SINE MIR 20 262 0 275 284 46 17 chr17 21813767 21813909 -67690644 - MIR SINE MIR -35 173 25 200 297 63 9 chr17 21814207 21814318 -67690235 + MIR3 SINE MIR 10 126 -82 600 295 145 9 chr17 21814701 21815026 -67689527 - L2 LINE L2 -1 3312 2944 262 338 55 21 chr17 21815177 21815322 -67689231 - MIR SINE MIR -65 197 48 1655 157 27 33 chr17 21815466 21815644 -67688909 - AluJo SINE Alu -10 302 125 234 0 0 0 chr17 21815644 21815670 -67688883 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1655 157 27 33 chr17 21815670 21815791 -67688762 - AluJo SINE Alu -187 125 5 440 327 62 64 chr17 21815812 21816249 -67688304 - L2 LINE L2 0 3272 2837 276 276 26 0 chr17 21816455 21816531 -67688022 + GA-rich Low_complexity Low_complexity 3 80 0 449 265 8 23 chr17 21816973 21817105 -67687448 - MIR SINE MIR -129 133 4 207 100 0 0 chr17 21817242 21817272 -67687281 + (TC)n Simple_repeat Simple_repeat 1 30 0 1515 144 21 103 chr17 21817302 21817641 -67686912 - AluJb SINE Alu -1 311 1 1059 61 0 0 chr17 21817947 21818079 -67686474 - AluSg/x SINE Alu -13 299 168 445 133 24 12 chr17 21818093 21818176 -67686377 + LTR25 LTR ERV1 25 108 -686 1265 48 30 6 chr17 21818176 21818341 -67686212 - AluSq SINE Alu -144 169 1 2293 93 0 6 chr17 21818344 21818656 -67685897 - AluSg SINE Alu 0 310 1 1025 146 12 0 chr17 21818831 21818996 -67685557 + FRAM SINE Alu 6 172 -4 2299 39 14 0 chr17 21819067 21819373 -67685180 - AluY SINE Alu 0 310 1 2131 110 0 0 chr17 21819375 21819667 -67684886 - AluSx SINE Alu -20 292 1 1032 109 0 0 chr17 21820059 21820196 -67684357 + AluSq/x SINE Alu 1 137 -176 2164 98 3 3 chr17 21820197 21820492 -67684061 + AluSx SINE Alu 1 295 -17 1732 128 0 0 chr17 21820507 21820756 -67683797 + AluSx SINE Alu 56 304 -8 2094 79 14 7 chr17 21820758 21821058 -67683495 + AluSx SINE Alu 3 304 0 1442 119 0 47 chr17 21821328 21821563 -67682990 - AluSg/x SINE Alu -6 306 83 228 294 132 37 chr17 21821799 21821935 -67682618 + MIR SINE MIR 1 149 -113 1164 139 6 0 chr17 21821984 21822157 -67682396 + AluSx SINE Alu 1 174 -138 287 299 35 0 chr17 21822464 21822551 -67682002 + Charlie8 DNA MER1_type 135 224 -2193 1439 155 23 111 chr17 21822552 21822775 -67681778 - AluJo SINE Alu 0 312 128 2275 98 10 0 chr17 21822775 21823081 -67681472 + AluSg SINE Alu 2 310 0 1439 155 23 111 chr17 21823081 21823199 -67681354 - AluJo SINE Alu -184 128 1 182 222 0 22 chr17 21823212 21823257 -67681296 + L2 LINE L2 2698 2741 -573 548 307 24 10 chr17 21823358 21823659 -67680894 - L1MEd LINE L1 -4896 1488 1175 630 142 0 28 chr17 21823659 21823800 -67680753 + (TCC)n Simple_repeat Simple_repeat 3 139 0 525 256 26 10 chr17 21823841 21824036 -67680517 - L1MEd LINE L1 -5051 1321 1124 187 304 117 85 chr17 21824043 21824290 -67680263 + L2 LINE L2 2933 3187 -85 1903 123 3 54 chr17 21824603 21824920 -67679633 - AluJo SINE Alu -11 301 1 1117 157 0 0 chr17 21825679 21825857 -67678696 - AluSg/x SINE Alu -1 309 132 1886 59 0 8 chr17 21825857 21826096 -67678457 - AluSc SINE Alu -8 301 65 910 278 99 50 chr17 21826314 21826757 -67677796 - L2 LINE L2 -10 3303 2839 261 236 0 0 chr17 21827785 21827840 -67676713 + MIR SINE MIR 94 148 -60 744 135 0 26 chr17 21828214 21828370 -67676183 + (TCC)n Simple_repeat Simple_repeat 3 154 0 518 261 26 10 chr17 21828411 21828606 -67675947 - L1MEd LINE L1 -5051 1068 871 187 304 117 85 chr17 21828613 21828860 -67675693 + L2 LINE L2 2933 3187 -85 1903 123 3 54 chr17 21829174 21829491 -67675062 - AluJo SINE Alu -11 301 1 1082 156 0 6 chr17 21830250 21830429 -67674124 - AluSg/x SINE Alu -1 311 134 2294 74 0 22 chr17 21830429 21830740 -67673813 - AluSq SINE Alu -9 304 1 1438 133 0 5 chr17 21830946 21831156 -67673397 + AluJb SINE Alu 70 278 -34 1725 158 10 6 chr17 21831466 21831777 -67672776 + AluJo SINE Alu 1 312 0 194 128 26 0 chr17 21832098 21832137 -67672416 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 2153 84 0 3 chr17 21832143 21832468 -67672085 - AluY SINE Alu 0 324 1 1816 122 51 14 chr17 21832474 21832770 -67671783 - AluSx SINE Alu -5 307 1 2316 74 6 13 chr17 21832791 21833102 -67671451 - AluSc SINE Alu 0 309 1 22 0 0 0 chr17 21833536 21833558 -67670995 + AT_rich Low_complexity Low_complexity 1 22 0 442 208 62 84 chr17 21833636 21833806 -67670747 - MLT1H LTR MaLR 0 582 406 267 213 14 15 chr17 21833948 21834015 -67670538 - MLT1H LTR MaLR -273 160 65 182 125 0 0 chr17 21834335 21834367 -67670186 - MIR SINE MIR -125 137 106 1720 161 25 0 chr17 21834408 21834693 -67669860 + AluJb SINE Alu 1 292 -20 1001 105 0 33 chr17 21834694 21834846 -67669707 + AluSq/x SINE Alu 1 147 -165 669 247 12 29 chr17 21834894 21835064 -67669489 - MIR SINE MIR -50 212 46 497 275 31 12 chr17 21835330 21835490 -67669063 + MIR SINE MIR 74 236 -26 246 225 70 14 chr17 21835647 21835718 -67668835 - MIR3 SINE MIR -25 183 109 303 183 42 61 chr17 21835765 21836418 -67668135 + (CCCA)n Simple_repeat Simple_repeat 1 640 0 297 128 0 0 chr17 21837062 21837109 -67667444 - MSTB2 LTR MaLR 0 457 411 1591 160 7 4 chr17 21837112 21837387 -67667166 - AluJo SINE Alu -9 303 28 418 288 88 0 chr17 21837545 21837705 -67666848 + L2 LINE L2 2922 3095 -177 284 350 24 8 chr17 21837985 21838108 -67666445 + MIR SINE MIR 19 143 -65 368 277 100 42 chr17 21838113 21838306 -67666247 - L2 LINE L2 -10 3303 3123 2174 98 3 0 chr17 21838306 21838601 -67665952 + AluSp SINE Alu 1 296 -17 2407 78 0 0 chr17 21838601 21838908 -67665645 + AluSx SINE Alu 1 308 -4 368 277 100 42 chr17 21838908 21838973 -67665580 - L2 LINE L2 -189 3124 3029 388 259 15 30 chr17 21839089 21839220 -67665333 + L2 LINE L2 3173 3301 -12 274 264 199 26 chr17 21839363 21839638 -67664915 - L2 LINE L2 -175 3097 2780 861 137 0 0 chr17 21839693 21839817 -67664736 + FRAM SINE Alu 33 156 -20 2270 64 0 3 chr17 21839823 21840130 -67664423 + AluY SINE Alu 1 306 0 460 327 119 0 chr17 21840213 21840415 -67664138 + MIR SINE MIR 37 262 0 466 265 61 0 chr17 21840513 21840537 -67664016 - LTR16C LTR ERVL 0 491 470 2086 103 0 10 chr17 21840537 21840829 -67663724 + AluSc SINE Alu 1 289 -20 466 265 61 0 chr17 21840829 21840936 -67663617 - LTR16C LTR ERVL -21 470 352 231 235 0 0 chr17 21841042 21841091 -67663462 - LTR16C LTR ERVL -338 153 105 378 164 82 119 chr17 21841091 21841225 -67663328 + MER53 DNA DNA 1 129 -60 1662 113 0 0 chr17 21841230 21841461 -67663092 + AluSg SINE Alu 1 231 -79 2536 45 0 6 chr17 21841649 21841962 -67662591 + AluY SINE Alu 1 311 0 437 241 90 28 chr17 21842204 21842416 -67662137 - MER113 DNA MER1_type? -176 345 121 1757 145 3 3 chr17 21842416 21842718 -67661835 + AluJo SINE Alu 1 302 0 185 156 0 44 chr17 21843454 21843499 -67661054 + GA-rich Low_complexity Low_complexity 3 45 0 1285 181 126 4 chr17 21843538 21843658 -67660895 + AluSx SINE Alu 1 105 -207 240 35 0 0 chr17 21843658 21843687 -67660866 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1285 181 126 4 chr17 21843687 21843836 -67660717 + AluSx SINE Alu 105 303 -9 3121 179 24 8 chr17 21843838 21844423 -67660130 - L1MC2 LINE L1 -9 6335 5742 1048 157 0 0 chr17 21844423 21844589 -67659964 - AluSg/x SINE Alu -17 293 128 211 206 145 99 chr17 21945440 21945571 -67558982 - MIR SINE MIR -82 180 44 237 333 16 0 chr17 21945574 21945637 -67558916 - MIR SINE MIR -185 77 14 1861 133 4 0 chr17 21945794 21946073 -67558480 - AluSx SINE Alu 0 312 33 2257 92 14 0 chr17 21946260 21946554 -67557999 - AluSp SINE Alu -15 298 1 210 248 238 9 chr17 21946710 21946815 -67557738 - MIR SINE MIR -17 245 117 2157 119 8 72 chr17 21947211 21947571 -67556982 - MER1B DNA MER1_type 0 337 1 1389 135 14 87 chr17 21948046 21948335 -67556218 + AluJo SINE Alu 45 312 0 3350 188 16 31 chr17 21949653 21950650 -67553903 + L1P4 LINE L1 4549 5524 -642 740 163 0 0 chr17 21950753 21950882 -67553671 + AluJb SINE Alu 184 312 0 271 233 159 91 chr17 21950905 21951081 -67553472 - L2 LINE L2 -240 3073 2886 345 180 11 34 chr17 21951089 21951178 -67553375 + FLAM_A SINE Alu 46 132 -1 2167 106 0 13 chr17 21951180 21951315 -67553238 + AluSx SINE Alu 1 136 -176 2029 114 23 3 chr17 21951315 21951621 -67552932 + AluSx SINE Alu 1 312 0 2167 106 0 13 chr17 21951621 21951796 -67552757 + AluSx SINE Alu 136 307 -5 2338 57 7 3 chr17 21951799 21952099 -67552454 + AluY SINE Alu 1 301 -10 270 260 234 0 chr17 21952404 21952481 -67552072 - MIR SINE MIR -116 146 52 1823 114 0 0 chr17 21952616 21952871 -67551682 + AluSx SINE Alu 46 300 -12 1009 204 39 46 chr17 21952873 21953017 -67551536 + L1MD2 LINE L1 5887 6031 -328 1568 173 0 27 chr17 21953017 21953153 -67551400 + AluJo SINE Alu 1 139 -173 2218 60 10 17 chr17 21953153 21953451 -67551102 + AluY SINE Alu 1 296 -15 1568 173 0 27 chr17 21953451 21953609 -67550944 + AluJo SINE Alu 139 287 -25 1009 204 39 46 chr17 21953609 21953874 -67550679 + L1MD2 LINE L1 6031 6344 -15 2023 128 7 0 chr17 21953891 21954181 -67550372 + AluSx SINE Alu 1 292 -20 461 241 83 0 chr17 21954192 21954318 -67550235 - MLT1C LTR MaLR -63 404 268 923 124 0 0 chr17 21954318 21954447 -67550106 - LOR1a LTR ERV1 0 497 369 1810 248 54 8 chr17 21954447 21954948 -67549605 + L1M4 LINE L1 3804 4327 -1819 589 133 33 33 chr17 21954948 21955068 -67549485 - AluSp/q SINE Alu -1 312 193 1167 67 7 0 chr17 21955168 21955318 -67549235 + AluYa5 SINE Alu 153 303 -8 1333 167 8 20 chr17 21955320 21955571 -67548982 + AluJb SINE Alu 2 249 -63 1665 163 19 25 chr17 21955571 21955934 -67548619 + L1MB4 LINE L1 5804 6164 -16 937 157 22 101 chr17 21955950 21956217 -67548336 - AluJo SINE Alu -22 290 45 23 54 0 0 chr17 21956343 21956380 -67548173 + AT_rich Low_complexity Low_complexity 1 37 0 1100 202 0 9 chr17 21956555 21956773 -67547780 + U3 snRNA snRNA 1 216 -1 1285 75 0 0 chr17 21956983 21957144 -67547409 - AluY SINE Alu -150 161 1 796 144 0 24 chr17 21957144 21957311 -67547242 - L1MCa LINE L1 -3956 2470 2308 1722 176 3 22 chr17 21957322 21957635 -67546918 - AluJo SINE Alu -5 307 1 830 151 7 43 chr17 21957635 21957774 -67546779 - AluJo SINE Alu -177 135 2 2080 78 7 11 chr17 21957985 21958291 -67546262 - AluSg SINE Alu 0 305 1 373 148 0 0 chr17 21959221 21959282 -67545271 - Alu SINE Alu -1 300 240 863 200 9 86 chr17 21959382 21959449 -67545104 - AluJb SINE Alu -117 195 124 2117 109 0 3 chr17 21959449 21959751 -67544802 - AluSx SINE Alu -11 301 1 2034 129 0 0 chr17 21959757 21960051 -67544502 - AluSc SINE Alu -15 294 1 1530 157 88 7 chr17 21960051 21960325 -67544228 - AluSx SINE Alu -16 296 1 863 200 9 86 chr17 21960325 21960459 -67544094 - AluJb SINE Alu -191 121 2 1939 106 57 0 chr17 21960461 21960743 -67543810 - AluSg SINE Alu -12 298 1 1792 154 0 4 chr17 21960817 21961097 -67543456 - AluJb SINE Alu -33 279 1 1759 91 8 0 chr17 21961216 21961457 -67543096 - AluSc SINE Alu -16 293 51 1424 166 37 30 chr17 21961560 21961855 -67542698 - AluSx SINE Alu -15 297 1 1615 193 9 26 chr17 21961878 21962225 -67542328 - MLT1-int LTR MaLR -847 524 184 1952 144 10 0 chr17 21962474 21962779 -67541774 + AluSq SINE Alu 1 308 -5 195 323 48 0 chr17 21962911 21962973 -67541580 + L2 LINE L2 3192 3256 -57 27 0 0 0 chr17 21963387 21963414 -67541139 + AT_rich Low_complexity Low_complexity 1 27 0 2249 84 0 10 chr17 21963440 21963736 -67540817 - AluY SINE Alu -18 293 1 3598 56 0 9 chr17 21963741 21964189 -67540364 - L1PA6 LINE L1 0 6154 5711 2613 242 60 22 chr17 21964256 21965090 -67539463 - HAL1 LINE L1 -123 2384 1519 1221 117 0 0 chr17 21965624 21965803 -67538750 - AluSq SINE Alu -1 312 134 2465 59 0 3 chr17 21965803 21966106 -67538447 - AluY SINE Alu -9 302 1 2326 64 0 38 chr17 21966106 21966420 -67538133 - AluY SINE Alu -9 302 1 2124 102 0 13 chr17 21966563 21966732 -67537821 - AluSq SINE Alu -12 301 136 2374 65 3 7 chr17 21966732 21967042 -67537511 - AluSp SINE Alu -4 309 1 2124 102 0 13 chr17 21967042 21967177 -67537376 - AluSq SINE Alu -177 136 1 211 135 0 39 chr17 21968248 21968300 -67536253 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 1775 149 16 13 chr17 21968420 21968729 -67535824 - AluJb SINE Alu 0 312 3 660 124 0 0 chr17 21968876 21968981 -67535572 - AluSg/x SINE Alu -3 307 203 357 119 6 3 chr17 21968994 21969063 -67535490 + Alu SINE Alu 248 302 0 345 250 200 21 chr17 21969987 21970127 -67534426 - MIR SINE MIR -80 182 18 1556 88 0 14 chr17 21970401 21970616 -67533937 + AluSx SINE Alu 1 212 -100 849 204 17 17 chr17 21970716 21970892 -67533661 - AluJo SINE Alu -128 184 9 2233 76 0 0 chr17 21970908 21971199 -67533354 - AluSx SINE Alu -21 291 1 802 117 7 44 chr17 21971204 21971341 -67533212 - L1MB2 LINE L1 -225 5946 5815 1711 148 43 13 chr17 21971341 21971644 -67532909 - AluJo SINE Alu 0 312 1 2237 79 3 10 chr17 21972117 21972422 -67532131 + AluSp SINE Alu 1 303 -10 1744 184 29 9 chr17 21973386 21973728 -67530825 + MER47A DNA MER2_type 18 366 0 494 260 92 23 chr17 21974182 21974355 -67530198 - Zaphod DNA AcHobo -2146 1885 1701 1970 137 0 3 chr17 21974355 21974662 -67529891 + AluSq SINE Alu 1 306 -7 987 87 0 0 chr17 21974662 21974789 -67529764 + AluSg SINE Alu 1 127 -183 1634 99 4 9 chr17 21974790 21975022 -67529531 + AluSq SINE Alu 11 241 -72 3968 79 33 18 chr17 21975123 21975666 -67528887 + PABL_A LTR ERV1 110 660 0 2239 103 0 0 chr17 21976224 21976526 -67528027 - AluSx SINE Alu -9 303 2 2079 110 6 31 chr17 21976758 21977075 -67527478 - AluSx SINE Alu -3 309 1 616 124 21 10 chr17 21977147 21977244 -67527309 + MER4A LTR ERV1 1 98 -566 1857 131 3 82 chr17 21977244 21977619 -67526934 + MER4A LTR ERV1 261 664 0 917 191 0 46 chr17 21978114 21978287 -67526266 - FAM SINE Alu -9 166 2 2253 210 16 7 chr17 21978463 21979020 -67525533 + L1 LINE L1 3496 4057 -2089 708 195 0 47 chr17 21979025 21979174 -67525379 + FLAM_C SINE Alu 2 143 0 1928 200 34 45 chr17 21979178 21979709 -67524844 + L1 LINE L1 4046 4570 -1576 348 270 121 6 chr17 21980181 21980355 -67524198 - LTR33A LTR ERVL -7 516 323 435 245 182 0 chr17 21980442 21980601 -67523952 - LTR50 LTR ERVL -607 188 1 257 206 145 99 chr17 21981699 21981830 -67522723 - MIR SINE MIR -82 180 44 236 333 16 0 chr17 21981833 21981896 -67522657 - MIR SINE MIR -185 77 14 2353 66 3 3 chr17 21981997 21982301 -67522252 - AluY SINE Alu -7 304 1 316 188 38 38 chr17 21982302 21982382 -67522171 + MER3 DNA MER1_type 125 204 -5 534 272 87 11 chr17 21982409 21982593 -67521960 + L2 LINE L2 3116 3313 0 196 185 56 148 chr17 21982610 21982718 -67521835 + MIR SINE MIR 33 130 -78 1484 43 0 134 chr17 21982785 21983017 -67521536 + LTR14A LTR ERVK 1 201 -143 2218 160 35 2 chr17 21983017 21983417 -67521136 - L1PB4 LINE L1 -205 5951 5539 2143 76 45 0 chr17 21985688 21985976 -67518577 - AluY SINE Alu -10 301 1 431 36 18 0 chr17 21987039 21987094 -67517459 + HY3 scRNA scRNA 18 73 -28 4423 253 58 21 chr17 21987586 21987707 -67516846 - L1PBb LINE L1 -2765 4032 3917 222 37 0 0 chr17 21987707 21987734 -67516819 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 4423 253 58 21 chr17 21987734 21990120 -67514433 - L1PBb LINE L1 -2880 3917 1362 2316 127 0 12 chr17 21990783 21991121 -67513432 + MER1B DNA MER1_type 4 337 0 338 323 6 49 chr17 21991220 21991384 -67513169 - L1PBb LINE L1 -5268 1519 1363 * 1092 332 31 38 chr17 21991382 21991996 -67512557 - L1PBb LINE L1 -6177 610 1 954 150 12 19 chr17 21992155 21992315 -67512238 + AluJb SINE Alu 129 287 -25 532 279 124 63 chr17 21992783 21993098 -67511455 - MER102b DNA MER1_type -7 334 1 188 333 234 12 chr17 21993100 21993271 -67511282 + MIR SINE MIR 36 244 -18 197 333 48 12 chr17 21993418 21993502 -67511051 + MER5A DNA MER1_type 1 87 -102 195 200 22 22 chr17 21993561 21993606 -67510947 - MER5A DNA MER1_type -105 84 40 2136 91 3 7 chr17 21994144 21994488 -67510065 - AluSp SINE Alu 0 343 1 974 104 0 0 chr17 21994496 21994631 -67509922 - AluSp/q SINE Alu -22 291 157 400 143 0 0 chr17 21995939 21995995 -67508558 + AluJ/FLAM SINE Alu 2 57 -245 2477 127 27 11 chr17 21995995 21996622 -67507931 + L1P4 LINE L1 5000 5636 -529 797 206 0 0 chr17 21996623 21996793 -67507760 - L1P LINE L1 -1253 4893 4724 479 191 0 0 chr17 21996790 21996884 -67507669 + L1 LINE L1 4595 4688 -1458 * 843 205 44 44 chr17 21996884 21997089 -67507464 + Tigger2 DNA MER2_type 2511 2715 -3 795 251 77 60 chr17 21997096 21997395 -67507158 + L1MC4 LINE L1 6538 6841 -1201 894 198 6 6 chr17 21997495 21997662 -67506891 - AluJo SINE Alu -145 167 1 2332 59 7 3 chr17 21997665 21997968 -67506585 - AluY SINE Alu -7 304 1 1755 71 0 28 chr17 21998287 21998568 -67505985 - AluSx SINE Alu 0 311 38 521 152 188 0 chr17 21998618 21998730 -67505823 + FLAM_C SINE Alu 1 133 0 464 296 48 42 chr17 21998751 21998973 -67505580 - L1MC4a LINE L1 -522 5599 5380 1984 119 17 10 chr17 21998973 21999139 -67505414 - AluSx SINE Alu -8 304 134 2245 85 0 0 chr17 21999139 21999434 -67505119 - AluY SINE Alu -16 295 1 1984 119 17 10 chr17 21999434 21999569 -67504984 - AluSx SINE Alu -178 134 1 464 296 48 42 chr17 21999569 21999591 -67504962 - L1MC4a LINE L1 -741 5380 5360 1979 123 0 40 chr17 21999591 21999770 -67504783 - AluSx SINE Alu 0 312 150 2316 66 3 0 chr17 21999770 22000073 -67504480 - AluY SINE Alu -7 304 1 1188 126 0 48 chr17 22000073 22000218 -67504335 - AluSx SINE Alu -177 135 1 1979 123 0 40 chr17 22000073 22000218 -67504335 - AluSx SINE Alu -162 150 1 1999 130 0 10 chr17 22000220 22000519 -67504034 - AluSx SINE Alu -16 296 1 464 296 48 42 chr17 22000519 22000667 -67503886 - L1MC4a LINE L1 -487 5634 5488 1717 141 12 62 chr17 22000673 22000993 -67503560 - AluSx SINE Alu -8 304 1 2374 82 0 0 chr17 22001007 22001312 -67503241 - AluSc SINE Alu -4 305 1 802 151 14 43 chr17 22001331 22001470 -67503083 + AluJo SINE Alu 2 136 -176 759 180 0 0 chr17 22001524 22001652 -67502901 + AluJo SINE Alu 130 257 -55 602 286 98 7 chr17 22001692 22001979 -67502574 - L1M4 LINE L1 -3467 2679 2367 180 0 0 0 chr17 22001986 22002006 -67502547 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 716 154 34 0 chr17 22002021 22002138 -67502415 - AluSg/x SINE Alu -1 311 191 841 200 7 0 chr17 22002549 22002704 -67501849 - AluJb SINE Alu -153 159 4 377 338 3 36 chr17 22003665 22003978 -67500575 + C-rich Low_complexity Low_complexity 1 302 0 225 154 0 0 chr17 22003999 22004038 -67500515 + C-rich Low_complexity Low_complexity 1 39 0 257 318 23 23 chr17 22004040 22004216 -67500337 + CT-rich Low_complexity Low_complexity 4 179 0 264 297 0 68 chr17 22004347 22004539 -67500014 + C-rich Low_complexity Low_complexity 2 180 0 * 296 285 38 13 chr17 22004445 22004603 -67499950 + CT-rich Low_complexity Low_complexity 2 163 0 277 353 7 13 chr17 22004628 22004778 -67499775 + C-rich Low_complexity Low_complexity 2 150 0 208 274 0 0 chr17 22005149 22005200 -67499353 + (CCG)n Simple_repeat Simple_repeat 2 52 0 269 342 0 51 chr17 22005256 22005414 -67499139 + G-rich Low_complexity Low_complexity 2 151 0 2129 92 3 0 chr17 22005433 22005728 -67498825 + AluSg SINE Alu 1 296 -14 1298 72 0 0 chr17 22006176 22006370 -67498183 - AluY SINE Alu 0 312 119 737 112 9 0 chr17 22006474 22006581 -67497972 - AluY SINE Alu -202 109 2 460 274 96 0 chr17 22006687 22006822 -67497731 + L2 LINE L2 2514 2661 -653 817 240 13 52 chr17 22006824 22007057 -67497496 - MER58A DNA MER1_type 0 224 1 1514 179 3 14 chr17 22007112 22007397 -67497156 + AluJb SINE Alu 1 282 -30 432 55 0 0 chr17 22007412 22007467 -67497086 + (TA)n Simple_repeat Simple_repeat 1 55 0 328 268 150 31 chr17 22007495 22007622 -67496931 - L1MEc LINE L1 -4339 2057 1916 709 276 44 32 chr17 22009052 22009302 -67495251 - MER89-int LTR ERV1 -5142 1659 1407 225 326 0 11 chr17 22009355 22009447 -67495106 + CT-rich Low_complexity Low_complexity 2 92 0 3152 161 99 25 chr17 22010109 22010391 -67494162 + MER67C LTR ERV1 3 262 -448 2286 62 14 0 chr17 22010391 22010683 -67493870 + AluSp SINE Alu 1 296 -17 3152 161 99 25 chr17 22010683 22011054 -67493499 + MER67C LTR ERV1 262 705 -5 1998 85 4 0 chr17 22011054 22011313 -67493240 + AluSp SINE Alu 1 260 -53 2351 83 0 6 chr17 22011313 22011624 -67492929 + AluSg SINE Alu 1 310 0 1027 159 0 0 chr17 22011629 22011799 -67492754 + AluSg/x SINE Alu 136 305 -5 1585 173 27 20 chr17 22011807 22012107 -67492446 + AluJb SINE Alu 1 302 -10 687 196 22 73 chr17 22012128 22012307 -67492246 - L1 LINE L1 -1156 4990 4821 501 206 28 0 chr17 22012325 22012466 -67492087 + GA-rich Low_complexity Low_complexity 2 146 0 2122 129 0 0 chr17 22012467 22012776 -67491777 + AluSg SINE Alu 1 309 -1 257 204 0 20 chr17 22012776 22012825 -67491728 + polypurine Low_complexity Low_complexity 1 48 0 741 222 149 0 chr17 22012825 22013019 -67491534 + MLT1G3 LTR MaLR 78 300 -230 636 260 23 55 chr17 22013238 22013391 -67491162 + LTR16C LTR ERVL 270 415 -76 2097 120 10 0 chr17 22013391 22013692 -67490861 + AluSx SINE Alu 9 312 0 636 260 23 55 chr17 22013692 22013757 -67490796 + LTR16C LTR ERVL 415 481 -10 786 297 52 0 chr17 22013766 22013998 -67490555 + MIR SINE MIR 8 251 -11 316 264 96 45 chr17 22014020 22014198 -67490355 - MLT1K LTR MaLR -46 542 356 2041 132 3 0 chr17 22014221 22014517 -67490036 + AluSq SINE Alu 7 303 -10 1795 137 25 0 chr17 22014537 22014822 -67489731 + AluSq SINE Alu 12 303 -10 945 118 0 7 chr17 22014822 22014958 -67489595 + AluSq/x SINE Alu 1 135 -177 2145 54 0 0 chr17 22014958 22015216 -67489337 + AluY SINE Alu 1 258 -53 875 195 53 102 chr17 22015319 22015672 -67488881 + L1MC4 LINE L1 7720 7995 0 758 126 42 48 chr17 22015762 22015929 -67488624 + L1MC4 LINE L1 7242 7407 -635 10015 226 17 19 chr17 22015942 22018669 -67485884 + L1P4 LINE L1 1122 4652 -2932 11335 196 78 19 chr17 22018674 22020405 -67484148 - L1PB1 LINE L1 -2 6865 5238 180 0 0 0 chr17 22020405 22020425 -67484128 + (TTA)n Simple_repeat Simple_repeat 2 21 0 11335 196 78 19 chr17 22020425 22021210 -67483343 - L1PB1 LINE L1 -1629 5238 4501 2134 150 22 30 chr17 22021210 22021577 -67482976 - THE1B LTR MaLR 0 364 1 11335 196 78 19 chr17 22021577 22022885 -67481668 - L1PB1 LINE L1 -2366 4501 2801 8037 132 12 0 chr17 22022886 22024596 -67479957 + L1P4 LINE L1 5484 7208 -404 1449 205 7 3 chr17 22025334 22025642 -67478911 - AluJb SINE Alu 0 309 1 257 291 159 72 chr17 22025846 22026345 -67478208 - L2 LINE L2 0 3272 2745 334 274 53 26 chr17 22028167 22028280 -67476273 - MIR3 SINE MIR -48 160 45 2315 90 0 0 chr17 22028360 22028671 -67475882 + AluY SINE Alu 1 311 0 2142 120 0 0 chr17 22028685 22028993 -67475560 + AluSg SINE Alu 3 310 0 6640 234 70 31 chr17 22033247 22033830 -67470723 - L1 LINE L1 -3151 4057 3498 182 37 37 0 chr17 22033830 22033857 -67470696 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 6640 234 70 31 chr17 22033857 22034382 -67470171 - L1 LINE L1 -3710 3498 2995 1826 162 0 13 chr17 22034382 22034697 -67469856 - AluSx SINE Alu -1 311 1 6640 234 70 31 chr17 22034697 22036634 -67467919 - L1 LINE L1 -4213 2995 841 877 235 5 0 chr17 22036726 22036936 -67467617 - L1 LINE L1 -6628 581 13 246 282 0 14 chr17 22038096 22038167 -67466386 + Tigger5 DNA MER2_type 2249 2318 -5 345 250 0 25 chr17 22038185 22038265 -67466288 - Tigger5 DNA MER2_type -2244 79 2 1210 283 142 20 chr17 22038641 22039134 -67465419 - MLT1G1 LTR MaLR 0 595 2 2012 81 19 42 chr17 22039883 22040191 -67464362 + AluY SINE Alu 1 301 -10 351 301 96 7 chr17 22040431 22040567 -67463986 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 22041175 22041199 -67463354 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 294 303 110 0 chr17 22041530 22041639 -67462914 - MIR3 SINE MIR -7 201 81 308 257 86 37 chr17 22042853 22043040 -67461513 - L2 LINE L2 -556 2758 2563 190 260 106 29 chr17 22043359 22043463 -67461090 - L3b LINE CR1 -201 1382 1271 180 211 77 19 chr17 22045360 22045412 -67459141 + MIR3 SINE MIR 102 156 -52 227 220 13 31 chr17 22047128 22047287 -67457266 + CT-rich Low_complexity Low_complexity 2 157 0 1808 147 0 14 chr17 22047464 22047757 -67456796 - AluJb SINE Alu -21 291 3 1601 133 133 15 chr17 22047758 22048022 -67456531 - AluJo SINE Alu -7 295 1 426 241 76 21 chr17 22048023 22048168 -67456385 - MER106A DNA MER1_type -79 157 5 2074 107 0 0 chr17 22048219 22048509 -67456044 - AluSx SINE Alu -15 297 8 216 247 55 14 chr17 22048752 22048825 -67455728 + C-rich Low_complexity Low_complexity 2 77 0 236 239 87 76 chr17 22050152 22050336 -67454217 + L2 LINE L2 2870 3055 -217 856 283 36 12 chr17 22052199 22052446 -67452107 + MIR SINE MIR 9 261 -1 515 283 51 0 chr17 22052433 22052571 -67451982 + L2 LINE L2 3169 3313 0 * 1860 151 0 13 chr17 22053115 22053413 -67451140 - AluJb SINE Alu -16 296 3 1429 150 135 22 chr17 22053414 22053681 -67450872 - AluJo SINE Alu -15 297 1 2241 101 0 0 chr17 22054963 22055261 -67449292 - AluSx SINE Alu -14 298 1 2298 103 0 0 chr17 22056204 22056514 -67448039 - AluSx SINE Alu -2 310 1 1263 170 6 45 chr17 22056593 22056908 -67447645 + MLT1D LTR MaLR 218 505 0 1792 104 39 8 chr17 22057179 22057438 -67447115 - AluSx SINE Alu -13 299 33 1021 76 8 0 chr17 22057438 22057569 -67446984 - AluSq/x SINE Alu -180 132 1 1442 202 4 4 chr17 22057588 22057845 -67446708 + AluJo SINE Alu 43 299 -13 1544 245 17 12 chr17 22057854 22058258 -67446295 - MLT1D LTR MaLR -53 452 47 41 58 0 0 chr17 22058358 22058427 -67446126 + AT_rich Low_complexity Low_complexity 1 69 0 415 338 49 66 chr17 22058832 22059113 -67445440 + L1MEc LINE L1 786 1202 -1374 1891 85 4 0 chr17 22059113 22059361 -67445192 + AluY SINE Alu 1 249 -62 415 338 49 66 chr17 22059361 22059391 -67445162 + L1MEc LINE L1 1202 1231 -1345 198 383 78 5 chr17 22059401 22059594 -67444959 + L2 LINE L2 2543 2749 -565 3262 116 24 24 chr17 22059609 22060360 -67444193 - L1PA13 LINE L1 -1 6153 5384 499 255 13 110 chr17 22060620 22060852 -67443701 + LTR41 LTR ERVL 469 722 -73 988 68 94 233 chr17 22060852 22060938 -67443615 - MER30 DNA MER1_type -1 229 133 1945 124 7 13 chr17 22060938 22061237 -67443316 + AluSx SINE Alu 1 297 -15 2009 125 27 0 chr17 22061239 22061534 -67443019 + AluSc SINE Alu 1 303 -6 988 68 94 233 chr17 22061534 22061710 -67442843 - MER30 DNA MER1_type -98 132 1 499 255 13 110 chr17 22061710 22061812 -67442741 + LTR41 LTR ERVL 722 791 -4 276 326 186 33 chr17 22061814 22062273 -67442280 + L2 LINE L2 2787 3312 -1 549 296 40 20 chr17 22062327 22062580 -67441973 + MIR SINE MIR 2 259 -3 1251 308 35 16 chr17 22066559 22067225 -67437328 - L1MC3 LINE L1 -1629 6156 5479 230 349 28 46 chr17 22071952 22072061 -67432492 + MIR SINE MIR 82 188 -74 1327 173 111 29 chr17 22072455 22072796 -67431757 - THE1C LTR MaLR 0 375 7 467 298 13 20 chr17 22073062 22073234 -67431319 + MIR SINE MIR 3 174 -88 180 415 11 11 chr17 22074336 22074430 -67430123 + MIR SINE MIR 48 141 -67 215 280 0 0 chr17 22076057 22076132 -67428421 + (CCA)n Simple_repeat Simple_repeat 1 75 0 350 276 118 7 chr17 22076919 22077071 -67427482 + MIR3 SINE MIR 33 201 -7 420 268 39 0 chr17 22077150 22077277 -67427276 + MIR SINE MIR 20 151 -111 243 316 90 13 chr17 22077796 22077945 -67426608 - MIR SINE MIR -72 136 11 307 233 25 75 chr17 22077977 22078097 -67426456 - MIR SINE MIR -64 144 31 5557 126 24 73 chr17 22078517 22079537 -67425016 - LTR5 LTR ERVK 0 969 1 443 266 65 0 chr17 22080912 22081036 -67423517 + MIR SINE MIR 88 219 -43 347 269 108 38 chr17 22081061 22081247 -67423306 - L2 LINE L2 -12 3301 3103 203 326 22 56 chr17 22082685 22082774 -67421779 + MIR SINE MIR 61 146 -62 233 234 9 103 chr17 22084056 22084163 -67420390 - MIR SINE MIR -60 148 52 1340 274 106 63 chr17 22088641 22089247 -67415306 - HAL1 LINE L1 -1494 1013 356 1723 104 119 11 chr17 22089247 22089515 -67415038 - AluSc SINE Alu -12 297 1 1340 274 106 63 chr17 22089515 22089782 -67414771 - HAL1 LINE L1 -2151 356 102 417 278 31 63 chr17 22091538 22091729 -67412824 - MIR SINE MIR -50 212 28 220 299 0 0 chr17 22092734 22092821 -67411732 + (TGG)n Simple_repeat Simple_repeat 1 87 0 500 312 40 13 chr17 22093224 22093374 -67411179 - MIR3 SINE MIR -42 166 33 333 315 115 45 chr17 22093885 22094055 -67410498 - MIR3 SINE MIR -20 188 8 226 319 166 47 chr17 22094387 22094556 -67409997 + MER5A DNA MER1_type 1 189 0 801 171 23 0 chr17 22095099 22095228 -67409325 + FLAM_A SINE Alu 2 133 0 241 169 153 0 chr17 22097258 22097317 -67407236 - L2 LINE L2 -1 3271 3204 270 211 42 14 chr17 22097769 22097840 -67406713 - MIR SINE MIR -28 234 162 2159 120 0 0 chr17 22097847 22098146 -67406407 - AluSx SINE Alu -13 299 1 560 290 139 57 chr17 22098192 22098558 -67405995 + L2 LINE L2 2857 3252 -20 346 269 126 8 chr17 22098571 22098690 -67405863 - MIR SINE MIR -123 139 7 2431 64 0 0 chr17 22099743 22100040 -67404513 - AluY SINE Alu -1 310 14 978 239 99 9 chr17 22100874 22101208 -67403345 + MER113 DNA MER1_type? 46 409 -112 725 129 10 0 chr17 22101209 22101310 -67403243 + AluJ/FLAM SINE Alu 1 102 -210 237 331 128 15 chr17 22101757 22101890 -67402663 + L2 LINE L2 3119 3266 -6 298 240 358 6 chr17 22102034 22102213 -67402340 + MIR SINE MIR 1 242 -20 318 248 171 0 chr17 22102660 22102765 -67401788 - L2 LINE L2 -1 3271 3149 855 211 92 90 chr17 22102865 22103287 -67401266 - MER113 DNA MER1_type? -51 470 48 672 258 145 22 chr17 22103629 22103947 -67400606 - L1ME4a LINE L1 -35 6086 5730 243 0 0 0 chr17 22103998 22104025 -67400528 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 729 241 6 13 chr17 22104028 22104186 -67400367 - AluJo SINE Alu -31 281 125 251 250 86 26 chr17 22104193 22104309 -67400244 - L1ME4a LINE L1 -440 5681 5559 1789 143 0 7 chr17 22104547 22104826 -67399727 + AluSx SINE Alu 1 277 -35 192 206 0 0 chr17 22105290 22105324 -67399229 - MER5A DNA MER1_type -155 34 1 281 359 96 13 chr17 22105324 22105480 -67399073 - MIR SINE MIR -81 181 13 430 248 248 21 chr17 22106068 22106306 -67398247 - L2 LINE L2 -1 3312 3021 190 266 0 62 chr17 22106399 22106463 -67398090 - MIR SINE MIR -59 149 93 310 216 221 7 chr17 22106523 22106660 -67397893 - MIR SINE MIR -62 146 16 1911 123 37 0 chr17 22106718 22107018 -67397535 - AluY SINE Alu 0 311 1 483 232 252 0 chr17 22107206 22107357 -67397196 + MER5A DNA MER1_type 1 189 0 300 275 12 12 chr17 22107715 22107795 -67396758 - L2 LINE L2 -5 3308 3229 231 195 0 0 chr17 22107939 22107980 -67396573 - L2 LINE L2 -216 3056 3016 199 262 6 6 chr17 22108034 22108202 -67396351 + (CA)n Simple_repeat Simple_repeat 1 168 0 243 250 12 6 chr17 22108229 22108389 -67396164 + (CA)n Simple_repeat Simple_repeat 1 161 0 359 332 95 43 chr17 22108994 22109205 -67395348 + MIR SINE MIR 28 249 -13 289 327 9 9 chr17 22109472 22109585 -67394968 + L2 LINE L2 2251 2363 -951 984 229 9 0 chr17 22109612 22109826 -67394727 + MER20 DNA MER1_type 4 219 0 1908 122 6 68 chr17 22109884 22110220 -67394333 - MER1B DNA MER1_type -24 315 1 21 71 0 0 chr17 22111227 22111269 -67393284 + AT_rich Low_complexity Low_complexity 1 42 0 2035 107 0 4 chr17 22112810 22113122 -67391431 - AluSc SINE Alu 0 311 1 2187 99 0 29 chr17 22113178 22113490 -67391063 - AluSx SINE Alu -9 303 1 1476 170 52 4 chr17 22114036 22114307 -67390246 - AluJo SINE Alu -26 286 3 247 250 52 73 chr17 22115234 22115330 -67389223 - MIR SINE MIR -7 255 162 446 183 54 0 chr17 22115366 22115459 -67389094 - Charlie1 DNA MER1_type -30 2731 2634 626 209 58 0 chr17 22115473 22115612 -67388941 - Charlie1 DNA MER1_type -2544 217 71 1521 142 0 24 chr17 22115612 22115865 -67388688 + AluJb SINE Alu 1 247 -65 383 311 148 27 chr17 22116040 22116223 -67388330 - MIR SINE MIR -24 238 34 378 223 0 19 chr17 22117041 22117144 -67387409 + L1ME2 LINE L1 6064 6164 0 2056 99 0 57 chr17 22117156 22117470 -67387083 + AluY SINE Alu 1 296 -15 2098 137 0 3 chr17 22117666 22117979 -67386574 + AluSx SINE Alu 1 312 0 1591 151 60 17 chr17 22118937 22119236 -67385317 + AluJo SINE Alu 1 312 0 1839 154 3 39 chr17 22170093 22170405 -67334148 - AluJo SINE Alu -11 301 1 201 269 0 0 chr17 22170802 22170854 -67333699 + MER91B DNA MER1_type 79 130 -60 1595 179 34 10 chr17 22171122 22171418 -67333135 - AluJo SINE Alu -9 303 1 2239 174 21 28 chr17 22171527 22171963 -67332590 + Tigger2a DNA MER2_type 2 434 0 21 0 0 0 chr17 22171993 22172014 -67332539 + AT_rich Low_complexity Low_complexity 1 21 0 2398 64 7 3 chr17 22172103 22172400 -67332153 + AluY SINE Alu 1 298 -13 779 315 83 15 chr17 22172462 22172871 -67331682 - L3 LINE CR1 -11 1566 1130 520 323 6 12 chr17 22172872 22173036 -67331517 - L1MEc LINE L1 -6086 310 148 705 272 177 15 chr17 22173157 22173693 -67330860 + L1M4 LINE L1 4027 4649 -1497 2310 95 3 3 chr17 22173703 22173998 -67330555 + AluY SINE Alu 1 295 -16 269 299 23 11 chr17 22173998 22174172 -67330381 + L1M4 LINE L1 4740 4915 -1231 687 272 30 41 chr17 22174205 22174554 -67329999 - MLT1I LTR MaLR 0 450 60 271 305 93 7 chr17 22174625 22174776 -67329777 + L1M4 LINE L1 4962 5125 -1021 423 339 18 4 chr17 22174902 22175129 -67329424 + L1M4 LINE L1 4824 5053 -1093 1078 138 6 0 chr17 22175245 22175405 -67329148 + AluSx SINE Alu 1 161 -151 2089 109 20 3 chr17 22175497 22175790 -67328763 - AluSx SINE Alu -14 298 1 2293 96 13 0 chr17 22175790 22176093 -67328460 - AluSx SINE Alu -5 307 1 2732 42 0 0 chr17 22176099 22176405 -67328148 - AluY SINE Alu -5 306 1 240 290 0 0 chr17 22176492 22176554 -67327999 - L2 LINE L2 -347 2925 2864 216 0 0 0 chr17 22176554 22176578 -67327975 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr17 22176719 22176740 -67327813 + AT_rich Low_complexity Low_complexity 1 21 0 310 343 9 0 chr17 22177669 22177774 -67326779 - L2 LINE L2 -11 3302 3197 1806 184 23 20 chr17 22177788 22178135 -67326418 + MLT2C1 LTR ERVL 1 348 -49 366 23 0 0 chr17 22178136 22178179 -67326374 + (TG)n Simple_repeat Simple_repeat 1 43 0 451 271 58 26 chr17 22178306 22178461 -67326092 + MIR SINE MIR 37 196 -66 212 292 101 11 chr17 22178478 22178567 -67325986 - MIR SINE MIR -150 112 16 296 294 23 0 chr17 22178824 22178927 -67325626 + MIR SINE MIR 55 160 -48 1471 137 64 6 chr17 22179423 22179732 -67324821 + LTR54 LTR ERV1 1 376 -134 249 143 159 32 chr17 22179759 22179822 -67324731 + MER57A LTR ERV1 330 400 -3 338 219 0 0 chr17 22180028 22180101 -67324452 - MIR SINE MIR -15 247 175 2817 212 32 14 chr17 22180484 22181097 -67323456 - L1M4 LINE L1 -2887 3259 2630 2115 108 31 0 chr17 22181097 22181384 -67323169 - AluSx SINE Alu -15 297 2 2817 212 32 14 chr17 22181384 22181496 -67323057 - L1M4 LINE L1 -3516 2630 2521 2054 189 32 18 chr17 22181772 22182212 -67322341 + L1MB5 LINE L1 652 1097 -5445 610 224 9 9 chr17 22182212 22182328 -67322225 + FLAM_C SINE Alu 2 117 -26 2209 124 0 3 chr17 22182355 22182654 -67321899 + AluSx SINE Alu 1 298 -14 27 49 0 0 chr17 22182654 22182695 -67321858 + AT_rich Low_complexity Low_complexity 1 41 0 646 200 39 0 chr17 22182699 22182854 -67321699 + L1MB5 LINE L1 1079 1239 -5303 1338 181 38 52 chr17 22182858 22182903 -67321650 + L1MB5 LINE L1 4895 4939 -1705 1415 172 67 50 chr17 22182903 22183200 -67321353 + AluJo SINE Alu 1 302 -10 1338 181 38 52 chr17 22183200 22183499 -67321054 + L1MB5 LINE L1 4939 5236 -1408 2291 92 3 23 chr17 22183499 22183803 -67320750 + AluSg1 SINE Alu 1 298 -11 1338 181 38 52 chr17 22183803 22183822 -67320731 + L1MB5 LINE L1 5236 5254 -1390 2258 100 3 7 chr17 22183824 22184123 -67320430 + AluSp SINE Alu 1 298 -15 1709 124 80 29 chr17 22184136 22184411 -67320142 + AluSq SINE Alu 7 295 -18 936 118 14 35 chr17 22184419 22184563 -67319990 + AluSx SINE Alu 1 141 -171 1547 190 0 0 chr17 22184563 22184810 -67319743 - AluJb SINE Alu -65 247 1 1268 182 42 29 chr17 22184816 22184874 -67319679 + L1MB5 LINE L1 5587 5643 -1001 1978 73 23 8 chr17 22184874 22185135 -67319418 + AluSg SINE Alu 41 305 -5 1268 182 42 29 chr17 22185135 22185383 -67319170 + L1MB5 LINE L1 5643 5897 -747 1262 68 0 0 chr17 22185383 22185555 -67318998 + AluSx SINE Alu 136 307 0 378 0 0 0 chr17 22185554 22185596 -67318957 + (CA)n Simple_repeat Simple_repeat 2 43 0 574 130 0 22 chr17 22185601 22185693 -67318860 + FLAM_A SINE Alu 43 132 -10 904 161 32 63 chr17 22185693 22186130 -67318423 + L1MB5 LINE L1 5890 6361 -311 2148 127 0 0 chr17 22186130 22186413 -67318140 + AluSg SINE Alu 1 283 -27 904 161 32 63 chr17 22186413 22186710 -67317843 + L1MB5 LINE L1 6361 6666 -6 738 151 7 50 chr17 22187674 22187813 -67316740 + AluJo SINE Alu 2 134 -178 2463 97 0 0 chr17 22187815 22188126 -67316427 + AluSp SINE Alu 1 311 -2 23 0 0 0 chr17 22188126 22188149 -67316404 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 22188922 22188943 -67315610 + AT_rich Low_complexity Low_complexity 1 21 0 7170 58 6 46 chr17 22189434 22190802 -67313751 + SVA Other Other 433 1386 0 318 295 108 35 chr17 22190802 22191060 -67313493 + L1MEd LINE L1 874 1150 -4969 1283 136 48 19 chr17 22191113 22191319 -67313234 + AluSx SINE Alu 1 212 -100 1156 196 85 91 chr17 22191331 22191406 -67313147 + HsTC2 DNA Tc2 228 302 -1596 2371 93 6 3 chr17 22191406 22191718 -67312835 + AluSp SINE Alu 1 313 0 1156 196 85 91 chr17 22191718 22191984 -67312569 + HsTC2 DNA Tc2 302 567 -1331 2461 64 0 10 chr17 22191984 22192282 -67312271 + AluY SINE Alu 1 295 -16 273 247 14 0 chr17 22192300 22192373 -67312180 + HsTC2 DNA Tc2 621 694 -1204 254 128 0 0 chr17 22192381 22192420 -67312133 + HsTC2 DNA Tc2 1266 1304 -594 413 219 53 18 chr17 22192424 22192538 -67312015 + HsTC2 DNA Tc2 1777 1894 -4 939 154 0 0 chr17 22192619 22192755 -67311798 + AluSq/x SINE Alu 1 136 -176 2426 86 3 0 chr17 22192755 22193059 -67311494 + AluSp SINE Alu 1 305 -8 542 149 93 0 chr17 22193073 22193180 -67311373 + AluSg/x SINE Alu 193 309 0 1575 169 29 38 chr17 22193212 22193525 -67311028 - AluJb SINE Alu -2 310 1 1877 96 82 34 chr17 22193971 22194263 -67310290 + AluSg SINE Alu 1 306 -4 445 174 96 0 chr17 22194393 22194509 -67310044 + L1 LINE L1 3805 3951 -2195 1899 178 3 0 chr17 22195123 22195427 -67309126 - AluJo SINE Alu -7 305 1 1946 102 26 0 chr17 22195540 22195805 -67308748 + AluSx SINE Alu 29 300 -12 1240 129 0 0 chr17 22195812 22195983 -67308570 + AluSg/x SINE Alu 132 302 -10 1970 169 0 0 chr17 22196096 22196403 -67308150 + AluSx SINE Alu 1 307 -5 2162 70 52 0 chr17 22196422 22196715 -67307838 + AluSp SINE Alu 1 307 0 329 235 191 0 chr17 22196886 22196954 -67307599 + FRAM/FAM SINE Alu 3 83 -92 * 336 272 25 0 chr17 22196933 22197014 -67307539 - AluJ/FLAM SINE Alu -219 83 1 1548 212 20 0 chr17 22197050 22197352 -67307201 + AluJo SINE Alu 1 308 -4 382 238 228 10 chr17 22198131 22198337 -67306216 + L2 LINE L2 2010 2260 -1054 825 260 82 30 chr17 22198342 22198780 -67305773 + L2 LINE L2 2852 3312 -1 2143 92 3 3 chr17 22199111 22199395 -67305158 - AluSp SINE Alu -9 304 21 2116 118 28 0 chr17 22199395 22199684 -67304869 - AluSg SINE Alu -13 297 1 1973 157 0 3 chr17 22199684 22199984 -67304569 - AluSx SINE Alu -13 299 1 1658 174 3 10 chr17 22201083 22201371 -67303182 + AluJo SINE Alu 23 308 -4 1805 106 17 0 chr17 22201760 22201996 -67302557 + AluSp SINE Alu 1 240 -73 230 167 0 0 chr17 22202098 22202146 -67302407 + Alu SINE Alu 83 130 -3 1308 184 0 107 chr17 22202150 22202487 -67302066 + AluJb SINE Alu 1 301 -1 741 187 8 15 chr17 22202967 22203101 -67301452 + FLAM_C SINE Alu 1 133 0 259 241 84 0 chr17 22203137 22203220 -67301333 - MIR SINE MIR -6 256 167 2353 90 0 13 chr17 22203323 22203634 -67300919 - AluSq SINE Alu -6 307 1 1596 153 81 0 chr17 22203687 22203969 -67300584 - AluJb SINE Alu 0 305 3 690 252 139 54 chr17 22204753 22205198 -67299355 + L2 LINE L2 2827 3309 -4 2198 98 18 0 chr17 22205257 22205543 -67299010 - AluY SINE Alu -20 291 1 283 220 0 0 chr17 22205581 22205640 -67298913 + L2 LINE L2 3210 3268 -4 29 28 0 0 chr17 22205743 22205779 -67298774 + AT_rich Low_complexity Low_complexity 1 36 0 2248 103 0 3 chr17 22206681 22206972 -67297581 + AluSc SINE Alu 1 290 -19 2201 109 3 0 chr17 22207235 22207529 -67297024 + AluSg SINE Alu 1 295 -15 2155 102 12 50 chr17 22207672 22207994 -67296559 + AluSq SINE Alu 1 310 -3 2273 98 0 3 chr17 22207999 22208342 -67296211 + AluSx SINE Alu 8 349 0 787 232 185 31 chr17 22208435 22208694 -67295859 + AluSg SINE Alu 1 299 -1 2257 85 3 0 chr17 22208707 22209033 -67295520 + AluY SINE Alu 2 328 0 485 334 81 22 chr17 22209442 22209638 -67294915 - L3 LINE CR1 -2 1575 1392 2007 128 7 0 chr17 22209638 22209942 -67294611 + AluSx SINE Alu 1 306 0 485 334 81 22 chr17 22209942 22210151 -67294402 - L3 LINE CR1 -185 1392 1145 2492 87 3 0 chr17 22210332 22210643 -67293910 - AluSp SINE Alu -1 312 1 262 265 94 34 chr17 22211274 22211391 -67293162 + L2 LINE L2 3184 3307 -6 2077 113 17 10 chr17 22211470 22211770 -67292783 + AluSx SINE Alu 1 302 -10 2288 88 10 3 chr17 22211786 22212082 -67292471 + AluSg SINE Alu 5 302 -8 236 330 43 0 chr17 22212264 22212379 -67292174 - MIR SINE MIR -77 185 66 202 293 12 0 chr17 22213522 22213604 -67290949 + C-rich Low_complexity Low_complexity 6 88 0 * 225 196 22 0 chr17 22213563 22213609 -67290944 + (CCCCAG)n Simple_repeat Simple_repeat 2 48 0 546 282 117 24 chr17 22213944 22214106 -67290447 + MIR SINE MIR 21 208 -54 2290 62 0 28 chr17 22214106 22214420 -67290133 + AluSg SINE Alu 1 306 0 546 282 117 24 chr17 22214420 22214462 -67290091 + MIR SINE MIR 208 245 -17 2372 82 0 3 chr17 22214577 22214871 -67289682 - AluSx SINE Alu -19 293 1 549 244 86 38 chr17 22215021 22215230 -67289323 - MIR SINE MIR -39 223 5 330 250 222 45 chr17 22215614 22215970 -67288583 + MLT1K LTR MaLR 146 564 -24 265 242 118 79 chr17 22216188 22216366 -67288187 + L2 LINE L2 3115 3299 -14 297 183 0 17 chr17 22216390 22216450 -67288103 + MER63 DNA MER1_type 772 830 -230 928 149 58 0 chr17 22216476 22216630 -67287923 - AluJo SINE Alu -30 282 120 255 253 22 99 chr17 22216686 22216868 -67287685 - HAL1 LINE L1 -2239 268 101 570 216 116 25 chr17 22216869 22217068 -67287485 + MLT1F LTR MaLR 307 523 -19 230 250 61 45 chr17 22217485 22217592 -67286961 + MIR SINE MIR 78 183 -63 2288 128 0 0 chr17 22217824 22218136 -67286417 - AluSx SINE Alu 0 312 1 874 132 7 0 chr17 22218186 22218322 -67286231 - AluSg/x SINE Alu -15 297 161 594 268 48 0 chr17 22218546 22218714 -67285839 + MIR SINE MIR 20 195 -67 470 256 129 3 chr17 22218864 22219037 -67285516 - L1ME LINE L1 -460 5661 5468 2208 108 0 31 chr17 22219088 22219411 -67285142 + AluSq SINE Alu 1 313 0 285 308 67 0 chr17 22219476 22219580 -67284973 - L2 LINE L2 0 3313 3203 21 0 0 0 chr17 22219660 22219681 -67284872 + AT_rich Low_complexity Low_complexity 1 21 0 2445 76 3 0 chr17 22219707 22220008 -67284545 + AluSp SINE Alu 1 302 -11 2008 118 17 17 chr17 22220024 22220312 -67284241 + AluSx SINE Alu 1 288 -24 285 185 179 0 chr17 22220323 22220419 -67284134 + MIR SINE MIR 57 167 -68 329 209 230 97 chr17 22221171 22221367 -67283186 - MLT1K LTR MaLR 0 588 367 3844 229 75 36 chr17 22221484 22221682 -67282871 - L1M4c LINE L1 -3889 2936 2747 2168 108 7 10 chr17 22221682 22221979 -67282574 - AluSx SINE Alu -16 296 1 3844 229 75 36 chr17 22221979 22222637 -67281916 - L1M4c LINE L1 -4078 2747 2116 1754 170 35 0 chr17 22222637 22222919 -67281634 - AluJb SINE Alu -16 296 5 3844 229 75 36 chr17 22222919 22224611 -67279942 - L1M4c LINE L1 -4709 2116 14 1096 247 84 38 chr17 22224919 22225369 -67279184 - MER20B DNA MER1_type -1 782 312 1852 251 49 19 chr17 22225427 22225957 -67278596 - MER90 LTR ERV1 0 614 69 427 269 42 17 chr17 22225988 22226107 -67278446 - MER20B DNA MER1_type -542 241 120 297 200 80 40 chr17 22226109 22226184 -67278369 - MLT1J2 LTR MaLR -306 144 67 208 237 99 84 chr17 22226218 22226349 -67278204 + MIR SINE MIR 75 207 -55 465 19 0 0 chr17 22226431 22226485 -67278068 + (CA)n Simple_repeat Simple_repeat 2 55 0 2251 110 3 0 chr17 22226559 22226859 -67277694 + AluSp SINE Alu 1 301 -12 1407 247 70 15 chr17 22226994 22227398 -67277155 + MLT1G1 LTR MaLR 1 354 -176 437 219 86 0 chr17 22227394 22227499 -67277054 + MLT1G1 LTR MaLR 465 578 -12 * 888 281 126 52 chr17 22227676 22227783 -67276770 - MLT1J LTR MaLR 0 511 413 2086 123 10 7 chr17 22227783 22228075 -67276478 + AluSq SINE Alu 2 294 -19 888 281 126 52 chr17 22228075 22228443 -67276110 - MLT1J LTR MaLR -98 413 1 2625 39 13 0 chr17 22230182 22230487 -67274066 + AluY SINE Alu 1 309 -2 2299 107 0 0 chr17 22230678 22230976 -67273577 + AluY SINE Alu 1 298 -13 379 154 0 64 chr17 22231626 22231704 -67272849 - L2 LINE L2 -2 3270 3198 1185 174 82 0 chr17 22232159 22232366 -67272187 - MER58A DNA MER1_type 0 224 1 2420 85 0 3 chr17 22233314 22233620 -67270933 - AluY SINE Alu -1 310 6 1114 72 0 0 chr17 22233630 22233769 -67270784 + MER85 DNA T2_type 1 139 0 194 272 206 22 chr17 22234436 22234616 -67269937 + L2 LINE L2 3038 3250 -63 335 287 93 28 chr17 22234665 22234912 -67269641 + HAL1b LINE L1 62 324 -1024 542 242 78 0 chr17 22234959 22235112 -67269441 + HAL1b LINE L1 401 565 -783 408 245 69 73 chr17 22235143 22235376 -67269177 + HAL1b LINE L1 666 897 -451 23 0 0 0 chr17 22235858 22235881 -67268672 + AT_rich Low_complexity Low_complexity 1 23 0 2389 98 0 0 chr17 22235881 22236177 -67268376 + AluSg SINE Alu 1 296 -14 2770 201 41 60 chr17 22236220 22237117 -67267436 - L1MDa LINE L1 -4402 2138 1259 2974 0 0 0 chr17 22237139 22237479 -67267074 + AluY SINE Alu 1 340 0 21 0 0 0 chr17 22237681 22237702 -67266851 + AT_rich Low_complexity Low_complexity 1 21 0 1966 103 0 94 chr17 22237859 22237989 -67266564 + AluSx SINE Alu 14 155 -157 2289 114 13 0 chr17 22237989 22238297 -67266256 + AluSx SINE Alu 1 312 0 1966 103 0 94 chr17 22238297 22238477 -67266076 + AluSx SINE Alu 155 296 -16 2526 93 0 0 chr17 22238477 22238788 -67265765 + AluSx SINE Alu 1 311 -1 2332 100 10 0 chr17 22238961 22239270 -67265283 + AluSp SINE Alu 1 312 -1 302 245 68 68 chr17 22239298 22239461 -67265092 + L1MDa LINE L1 2441 2603 -3937 1480 101 10 10 chr17 22239472 22239679 -67264874 + AluSc SINE Alu 1 207 -102 2530 63 0 0 chr17 22239784 22240083 -67264470 - AluY SINE Alu -12 299 1 322 250 24 24 chr17 22240099 22240183 -67264370 - MLT1K LTR MaLR -92 496 413 507 33 0 0 chr17 22240619 22240680 -67263873 + (TA)n Simple_repeat Simple_repeat 2 62 0 3226 178 13 7 chr17 22241134 22241689 -67262864 - MER68 LTR ERV1 -4 558 1 2899 226 76 25 chr17 22241885 22242717 -67261836 + L1MC4 LINE L1 6694 7567 -475 480 77 0 0 chr17 22243629 22243694 -67260859 + (TA)n Simple_repeat Simple_repeat 2 66 0 2380 69 3 20 chr17 22244069 22244375 -67260178 - AluY SINE Alu -6 305 5 629 289 83 49 chr17 22244547 22244896 -67259657 + MLT1K LTR MaLR 75 435 -153 2161 74 70 0 chr17 22245340 22245611 -67258942 - AluSc SINE Alu -19 290 1 2226 102 7 0 chr17 22245830 22246125 -67258428 - AluSp SINE Alu -16 297 1 410 269 77 66 chr17 22247017 22247199 -67257354 - MIR SINE MIR -56 206 23 2314 86 0 10 chr17 22247407 22247709 -67256844 - AluSq SINE Alu -14 299 1 2310 100 25 0 chr17 22247709 22248030 -67256523 - L1P4 LINE L1 -394 5772 5444 306 289 283 11 chr17 22248448 22248635 -67255918 - MIR SINE MIR -11 251 14 949 222 93 15 chr17 22248706 22248976 -67255577 - L1M4 LINE L1 -1736 4410 4120 206 118 0 0 chr17 22248978 22249012 -67255541 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 211 157 56 56 chr17 22249319 22249427 -67255126 + (GCTTG)n Simple_repeat Simple_repeat 4 111 0 948 62 0 0 chr17 22250175 22250288 -67254265 + AluSg SINE Alu 1 113 -197 1669 140 4 0 chr17 22250464 22250707 -67253846 + AluSx SINE Alu 61 304 -8 2154 104 0 57 chr17 22250718 22251034 -67253519 + AluY SINE Alu 1 298 -13 1975 47 0 8 chr17 22251036 22251272 -67253281 + AluY SINE Alu 1 234 -77 353 94 506 0 chr17 22251216 22251301 -67253252 + AluYb8 SINE Alu 179 306 -2 501 297 148 58 chr17 22251309 22251843 -67252710 - L1M4 LINE L1 -2387 3759 3274 2177 109 0 7 chr17 22251843 22252126 -67252427 - AluSx SINE Alu -31 281 1 501 297 148 58 chr17 22252126 22252510 -67252043 - L1M4 LINE L1 -2872 3274 2786 1082 177 51 55 chr17 22252516 22252777 -67251776 + MER33 DNA MER1_type 1 262 -2323 2467 60 0 3 chr17 22252777 22253075 -67251478 + AluY SINE Alu 1 297 -14 1082 177 51 55 chr17 22253075 22253124 -67251429 + MER33 DNA MER1_type 262 310 -14 265 290 43 38 chr17 22253181 22253405 -67251148 - L1M4 LINE L1 -3404 2742 2517 1487 191 141 45 chr17 22253457 22253887 -67250666 + L1MDb LINE L1 16 403 -6006 420 37 0 0 chr17 22253887 22253941 -67250612 + (CA)n Simple_repeat Simple_repeat 2 55 0 1487 191 141 45 chr17 22253941 22254464 -67250089 + L1MDb LINE L1 403 1116 -5293 354 310 0 0 chr17 22254464 22254626 -67249927 - AluY SINE Alu 0 334 173 2326 85 7 26 chr17 22255208 22255514 -67249039 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr17 22259963 22259984 -67244569 + GC_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr17 22260068 22260090 -67244463 + (CCG)n Simple_repeat Simple_repeat 2 23 0 622 233 27 53 chr17 22260216 22260312 -67244241 + Charlie1 DNA MER1_type 2506 2603 -158 783 188 0 0 chr17 22260312 22260445 -67244108 - FLAM_C SINE Alu 0 133 1 622 233 27 53 chr17 22260445 22260610 -67243943 + Charlie1 DNA MER1_type 2603 2760 -1 382 330 142 42 chr17 22260613 22261262 -67243291 - L2 LINE L2 -436 2878 2165 2473 64 0 3 chr17 22261378 22261673 -67242880 + AluY SINE Alu 2 295 -16 715 239 61 0 chr17 22261773 22261953 -67242600 + MER58A DNA MER1_type 30 220 -4 399 279 33 16 chr17 22261955 22262077 -67242476 + MER102a DNA MER1_type 205 328 -2 315 325 105 4 chr17 22262622 22262850 -67241703 + L1ME3A LINE L1 4738 4988 -1158 25 51 0 0 chr17 22262934 22262973 -67241580 + AT_rich Low_complexity Low_complexity 1 39 0 462 233 96 44 chr17 22262991 22263300 -67241253 + L1ME3A LINE L1 5189 5503 -659 351 256 15 58 chr17 22263437 22263574 -67240979 + L1ME3A LINE L1 5769 5899 -271 1138 96 0 13 chr17 22263720 22263877 -67240676 - AluSg/x SINE Alu 0 310 156 2134 147 70 0 chr17 22263977 22264351 -67240202 + L1MA4A LINE L1 5894 6293 -10 190 286 0 0 chr17 22264394 22264450 -67240103 - L2 LINE L2 0 3313 3258 2674 43 3 0 chr17 22265159 22265464 -67239089 - AluY SINE Alu -5 306 1 360 290 180 5 chr17 22265618 22265835 -67238718 - HAL1 LINE L1 -1013 1494 1240 1410 233 108 12 chr17 22266299 22266773 -67237780 - MLT1E LTR MaLR -15 578 21 453 347 76 18 chr17 22266819 22267162 -67237391 - L2 LINE L2 -561 2753 2391 223 264 83 58 chr17 22268845 22268966 -67235587 - MER5A DNA MER1_type -22 167 44 2129 128 3 0 chr17 22269952 22270249 -67234304 + AluY SINE Alu 1 298 -13 2243 102 14 0 chr17 22270343 22270638 -67233915 + AluSx SINE Alu 1 299 -13 575 306 120 73 chr17 22270844 22271361 -67233192 - MLT1K LTR MaLR -2 586 46 213 121 0 0 chr17 22272146 22272179 -67232374 + (T)n Simple_repeat Simple_repeat 1 33 0 647 286 35 5 chr17 22272830 22273033 -67231520 - L1ME LINE L1 -514 5648 5440 1133 75 0 0 chr17 22273088 22273221 -67231332 + AluSq/x SINE Alu 1 133 -180 1894 128 23 7 chr17 22273353 22273659 -67230894 + AluY SINE Alu 1 311 0 973 327 72 28 chr17 22273705 22274360 -67230193 + L2 LINE L2 2019 2702 -612 794 186 0 0 chr17 22274372 22274501 -67230052 - FLAM_C SINE Alu 0 133 5 401 253 24 41 chr17 22274516 22274536 -67230017 - L1MA10 LINE L1 -2 6332 6313 1809 211 18 23 chr17 22274536 22274976 -67229577 - L1ME2 LINE L1 -9 6224 5787 332 248 43 34 chr17 22274979 22275096 -67229457 - L1ME2 LINE L1 -3992 2404 2287 1721 224 89 36 chr17 22275221 22275668 -67228885 + Charlie1a DNA MER1_type 1 471 -984 434 179 73 24 chr17 22275679 22275802 -67228751 - MER69 DNA AcHobo -206 2320 2192 770 138 40 13 chr17 22275910 22276062 -67228491 - L1MC3 LINE L1 -97 7688 7533 956 293 20 9 chr17 22276185 22276526 -67228027 - L1ME2 LINE L1 -6016 380 36 449 274 132 27 chr17 22276541 22276760 -67227793 + L2 LINE L2 2702 2943 -371 283 220 120 25 chr17 22277026 22277366 -67227187 + L1MC4a LINE L1 5254 5661 -460 325 259 56 5 chr17 22277382 22277579 -67226974 + L1MC4a LINE L1 5707 5824 -297 1193 170 9 5 chr17 22277903 22278115 -67226438 - MER20 DNA MER1_type -5 214 2 248 360 40 0 chr17 22278679 22278779 -67225774 + MIR3 SINE MIR 94 197 -11 1560 183 18 14 chr17 22280571 22280874 -67223679 + AluJo SINE Alu 2 305 0 2460 76 0 0 chr17 22282205 22282496 -67222057 + AluSc SINE Alu 3 293 -16 626 218 116 88 chr17 22282557 22282910 -67221643 + LTR52 LTR ERVL 1 363 -58 498 196 14 7 chr17 22283830 22283968 -67220585 + (TA)n Simple_repeat Simple_repeat 2 140 0 487 298 28 86 chr17 22284035 22284193 -67220360 + L2 LINE L2 2174 2340 -974 982 145 177 0 chr17 22284193 22284379 -67220174 - MER20 DNA MER1_type 0 219 1 487 298 28 86 chr17 22284379 22284524 -67220029 + L2 LINE L2 2340 2451 -863 2659 42 0 3 chr17 22284524 22284831 -67219722 - AluY SINE Alu -5 306 1 487 298 28 86 chr17 22284831 22284922 -67219631 + L2 LINE L2 2451 2546 -768 2561 56 0 7 chr17 22286032 22286334 -67218219 + AluY SINE Alu 1 300 -11 1040 229 136 37 chr17 22286449 22286824 -67217729 + MLT1J1 LTR MaLR 15 426 -20 2721 48 0 0 chr17 22287373 22287684 -67216869 + AluY SINE Alu 1 311 0 220 271 29 14 chr17 22288978 22289048 -67215505 - MIR3 SINE MIR -17 191 121 312 193 80 23 chr17 22289221 22289309 -67215244 + L2 LINE L2 3180 3272 0 462 265 176 20 chr17 22289688 22289892 -67214661 + MIR SINE MIR 22 257 -5 190 291 154 0 chr17 22291165 22291275 -67213278 + MIR3 SINE MIR 4 130 -78 356 253 71 18 chr17 22291311 22291481 -67213072 - MIR SINE MIR 0 262 84 293 208 62 21 chr17 22292042 22292138 -67212415 + AluYb8 SINE Alu 209 308 0 2163 82 14 10 chr17 22292177 22292470 -67212083 - AluSx SINE Alu -18 294 1 1343 122 56 49 chr17 22292470 22292710 -67211843 - L1M2c LINE L1 -4824 1965 1721 2390 65 0 62 chr17 22292710 22293033 -67211520 - AluY SINE Alu -8 303 1 1343 122 56 49 chr17 22293033 22293080 -67211473 - L1M2c LINE L1 -5068 1721 1676 1398 104 5 5 chr17 22293180 22293373 -67211180 + AluSq SINE Alu 104 296 -17 5306 238 20 52 chr17 22293374 22295085 -67209468 - L1M2c LINE L1 -5353 1436 14 2358 102 3 0 chr17 22295308 22295611 -67208942 + AluSx SINE Alu 1 304 -8 2062 99 0 64 chr17 22295622 22295936 -67208617 + AluY SINE Alu 1 294 -17 2139 81 19 42 chr17 22297878 22298186 -67206367 - AluY SINE Alu -10 301 1 1199 280 142 20 chr17 22298935 22299428 -67205125 + MLT1G1 LTR MaLR 2 595 0 349 250 0 25 chr17 22299804 22299884 -67204669 + Tigger5 DNA MER2_type 2 79 -2244 246 282 0 14 chr17 22299902 22299973 -67204580 - Tigger5 DNA MER2_type -5 2318 2249 872 235 5 0 chr17 22301133 22301343 -67203210 + L1MA5 LINE L1 13 581 -6628 6599 233 80 28 chr17 22301435 22303372 -67201181 + L1MA5 LINE L1 841 2675 -4533 1826 162 0 13 chr17 22303372 22303687 -67200866 + AluSx SINE Alu 1 311 -1 6599 233 80 28 chr17 22303687 22304212 -67200341 + L1MA5 LINE L1 2675 3171 -4037 182 37 37 0 chr17 22304212 22304239 -67200314 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 6599 233 80 28 chr17 22304239 22305474 -67199079 + L1MA5 LINE L1 3171 4809 -2399 1315 200 33 87 chr17 22305465 22305946 -67198607 + L1MA5 LINE L1 5218 5672 -1536 * 1092 332 31 38 chr17 22305967 22306581 -67197972 + L1PA13 LINE L1 1 610 -6177 338 323 6 49 chr17 22306579 22306743 -67197810 + L1PA13 LINE L1 1363 1519 -5268 * 2316 127 0 12 chr17 22306842 22307180 -67197373 - MER1B DNA MER1_type 0 337 4 7493 243 49 52 chr17 22307843 22310229 -67194324 + L1PA16 LINE L1 1362 3755 -3042 222 37 0 0 chr17 22310229 22310256 -67194297 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 7493 243 49 52 chr17 22310256 22311046 -67193507 + L1PA16 LINE L1 3755 4685 -2112 708 195 0 47 chr17 22311046 22311195 -67193358 + FLAM_C SINE Alu 2 143 0 7493 243 49 52 chr17 22311195 22311731 -67192822 + L1PA16 LINE L1 4685 5222 -1575 348 270 121 6 chr17 22312202 22312376 -67192177 - LTR33A LTR ERVL -7 516 323 435 245 182 0 chr17 22312463 22312622 -67191931 - LTR50 LTR ERVL -607 188 1 180 0 0 0 chr17 22313534 22313554 -67190999 + (A)n Simple_repeat Simple_repeat 1 20 0 4765 149 21 30 chr17 22313554 22315190 -67189363 + L1PA16 LINE L1 5200 6816 -1 3723 178 27 47 chr17 22315232 22316264 -67188289 + L1MA5 LINE L1 5662 6670 -692 2729 141 23 51 chr17 22316656 22317187 -67187366 + L1MA5 LINE L1 6655 7170 -192 1066 130 0 6 chr17 22317187 22317349 -67187204 - AluSg/x SINE Alu -16 294 134 862 147 40 6 chr17 22317359 22317536 -67187017 + L1MA5 LINE L1 7180 7362 0 436 230 0 0 chr17 22317539 22317626 -67186927 + AluJb SINE Alu 136 222 -90 1091 278 47 23 chr17 22319191 22319662 -67184891 + L1MC4 LINE L1 7556 8037 -5 2124 78 0 0 chr17 22319826 22320142 -67184411 - AluY SINE Alu 0 316 1 1924 65 34 71 chr17 22320169 22320492 -67184061 - AluY SINE Alu 0 311 1 1216 78 0 12 chr17 22320662 22320829 -67183724 - AluSp SINE Alu -7 306 142 1868 114 0 14 chr17 22320829 22321110 -67183443 - AluSq SINE Alu -36 277 1 424 298 73 29 chr17 22321115 22321320 -67183233 + L1ME3A LINE L1 5360 5573 -589 1050 122 37 16 chr17 22321434 22321623 -67182930 - L1MA8 LINE L1 -71 6220 6028 1230 280 50 43 chr17 22321642 22321867 -67182686 + L1ME3A LINE L1 5600 5822 -348 2278 82 0 7 chr17 22321867 22322172 -67182381 + AluY SINE Alu 1 303 -8 1230 280 50 43 chr17 22322172 22322503 -67182050 + L1ME3A LINE L1 5822 6160 -10 614 234 101 20 chr17 22323091 22323377 -67181176 - MLT2F LTR ERVL -86 577 204 297 0 0 0 chr17 22323380 22323413 -67181140 + (TG)n Simple_repeat Simple_repeat 1 33 0 226 225 0 38 chr17 22324309 22324389 -67180164 - HSAT5 Satellite Satellite -7 79 3 239 314 14 0 chr17 22324796 22324866 -67179687 + (CACG)n Simple_repeat Simple_repeat 2 72 0 258 145 16 65 chr17 22325166 22325228 -67179325 - SN5 Other centromeric -77 378 320 286 195 0 23 chr17 22325677 22325764 -67178789 - HSAT5 Satellite Satellite -1 85 1 313 213 6 30 chr17 22325810 22325911 -67178642 - HSAT5 Satellite Satellite -4 98 1 237 170 11 138 chr17 22326658 22326752 -67177801 - SN5 Other centromeric -77 378 297 198 0 0 0 chr17 22331298 22331320 -67173233 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 961 312 48 31 chr17 22331870 22332537 -67172016 + L1MC3 LINE L1 5479 6156 -1629 212 314 13 33 chr17 22334458 22334611 -67169942 + (CGGG)n Simple_repeat Simple_repeat 3 152 0 28 0 0 0 chr17 22335659 22335687 -67168866 + AT_rich Low_complexity Low_complexity 1 28 0 840 212 20 6 chr17 22335786 22336088 -67168465 - MLT1A2 LTR MaLR 0 374 1 698 172 83 30 chr17 22336622 22336791 -67167762 + MER3 DNA MER1_type 19 196 -13 2064 119 23 0 chr17 22336986 22337288 -67167265 + AluSg SINE Alu 1 309 -1 1041 98 7 0 chr17 22337361 22337514 -67167039 - AluSg/x SINE Alu 0 312 159 1491 199 0 3 chr17 22337598 22337889 -67166664 - AluJb SINE Alu -18 294 5 22 70 0 0 chr17 22338136 22338179 -67166374 + AT_rich Low_complexity Low_complexity 1 43 0 2048 105 7 3 chr17 22338185 22338481 -67166072 - AluSx SINE Alu -15 297 1 189 74 0 0 chr17 22338750 22338777 -67165776 + (CA)n Simple_repeat Simple_repeat 2 28 0 1054 133 0 0 chr17 22339505 22339663 -67164890 + AluSp SINE Alu 138 295 -18 194 0 39 0 chr17 22340327 22340353 -67164200 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1655 155 0 0 chr17 22340677 22340935 -67163618 - AluJb SINE Alu -54 258 1 1175 166 9 37 chr17 22340968 22341185 -67163368 + AluJb SINE Alu 77 287 -25 308 287 66 29 chr17 22341832 22341968 -67162585 - Charlie8 DNA MER1_type -2276 141 1 188 333 234 12 chr17 22341970 22342141 -67162412 + MIR SINE MIR 36 244 -18 197 333 48 12 chr17 22342288 22342372 -67162181 + MER5A DNA MER1_type 1 87 -102 195 200 22 22 chr17 22342431 22342476 -67162077 - MER5A DNA MER1_type -105 84 40 2141 98 3 0 chr17 22343014 22343352 -67161201 - AluSp SINE Alu 0 339 1 974 104 0 0 chr17 22343360 22343495 -67161058 - AluSp/q SINE Alu -22 291 157 400 143 0 0 chr17 22344801 22344857 -67159696 + AluJ/FLAM SINE Alu 2 57 -245 2472 127 27 11 chr17 22344857 22345484 -67159069 + L1P4 LINE L1 5000 5636 -529 797 206 0 0 chr17 22345485 22345655 -67158898 - L1P LINE L1 -1253 4893 4724 479 191 0 0 chr17 22345652 22345746 -67158807 + L1 LINE L1 4595 4688 -1458 * 843 205 44 44 chr17 22345746 22345951 -67158602 + Tigger2 DNA MER2_type 2511 2715 -3 2139 239 106 117 chr17 22345952 22347507 -67157046 + L1MC4a LINE L1 6515 7995 0 758 126 42 48 chr17 22347598 22347765 -67156788 + L1MC4 LINE L1 7242 7407 -635 9923 226 16 18 chr17 22347778 22350503 -67154050 + L1PA11 LINE L1 1122 4652 -2932 12365 180 15 20 chr17 22350508 22353043 -67151510 - L1PB1 LINE L1 -2 6865 4373 2109 150 22 30 chr17 22353043 22353410 -67151143 - THE1B LTR MaLR 0 364 1 12365 180 15 20 chr17 22353410 22354976 -67149577 - L1PB1 LINE L1 -2494 4373 2801 7764 145 17 15 chr17 22354977 22357095 -67147458 + L1PA11 LINE L1 5484 7611 -1 1352 237 118 11 chr17 22357110 22357544 -67147009 + L1MC4 LINE L1 7413 7892 -150 1575 194 7 3 chr17 22358307 22358639 -67145914 - AluJb SINE Alu 0 333 1 260 289 159 72 chr17 22358839 22359338 -67145215 - L2 LINE L2 0 3272 2745 339 266 53 26 chr17 22361157 22361270 -67143283 - MIR3 SINE MIR -48 160 45 2340 76 0 0 chr17 22361350 22361665 -67142888 + AluY SINE Alu 1 311 0 2283 114 0 0 chr17 22361678 22361986 -67142567 + AluSg SINE Alu 3 310 0 2201 104 0 0 chr17 22362975 22363264 -67141289 - AluSx SINE Alu -18 294 6 25 0 0 0 chr17 22363506 22363531 -67141022 + AT_rich Low_complexity Low_complexity 1 25 0 2043 118 11 0 chr17 22363541 22363821 -67140732 - AluSx SINE Alu -29 283 1 602 124 21 10 chr17 22363893 22363990 -67140563 + MER4A LTR ERV1 1 98 -566 1815 131 3 79 chr17 22363990 22364364 -67140189 + MER4A LTR ERV1 261 664 0 888 196 0 46 chr17 22364859 22365032 -67139521 - FAM SINE Alu -9 166 2 536 184 9 0 chr17 22366676 22366785 -67137768 + L1MA9 LINE L1 6164 6273 -39 2183 67 19 48 chr17 22368937 22369249 -67135304 - AluY SINE Alu -8 303 1 1136 280 144 22 chr17 22370001 22370494 -67134059 + MLT1G1 LTR MaLR 2 595 0 345 250 0 25 chr17 22370871 22370951 -67133602 + Tigger5 DNA MER2_type 2 79 -2244 253 268 0 14 chr17 22370969 22371040 -67133513 - Tigger5 DNA MER2_type -5 2318 2249 837 255 31 2 chr17 22372187 22372410 -67132143 + L1MA5 LINE L1 8 288 -6921 6551 235 79 29 chr17 22372502 22374438 -67130115 + L1MA5 LINE L1 841 2679 -4529 1888 168 0 10 chr17 22374438 22374748 -67129805 + AluSx SINE Alu 1 307 -5 6551 235 79 29 chr17 22374748 22376538 -67128015 + L1MA5 LINE L1 2679 4809 -2399 1641 177 28 64 chr17 22376531 22377001 -67127552 + L1MA5 LINE L1 5220 5672 -1536 * 9773 255 45 64 chr17 22377022 22377897 -67126656 + L1PA16 LINE L1 1 892 -5905 2239 124 0 12 chr17 22377897 22378235 -67126318 - MER1B DNA MER1_type 0 337 4 9773 255 45 64 chr17 22378235 22381284 -67123269 + L1PA16 LINE L1 892 3999 -2798 258 32 0 0 chr17 22381284 22381315 -67123238 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 9773 255 45 64 chr17 22381315 22382105 -67122448 + L1PA16 LINE L1 3999 4803 -1994 734 181 0 40 chr17 22382105 22382254 -67122299 + FLAM_C SINE Alu 1 143 0 9773 255 45 64 chr17 22382254 22383380 -67121173 + L1PA16 LINE L1 4803 5799 -998 392 241 12 56 chr17 22383875 22384037 -67120516 + GA-rich Low_complexity Low_complexity 2 156 0 4908 151 23 30 chr17 22385527 22386583 -67117970 + L1PA16 LINE L1 5769 6816 -1 3824 170 31 46 chr17 22386625 22388159 -67116394 + L1MA5 LINE L1 5662 7170 -192 1157 118 0 6 chr17 22388159 22388320 -67116233 - AluSg/x SINE Alu -17 295 136 948 138 17 6 chr17 22388330 22388511 -67116042 + L1MA5 LINE L1 7180 7362 0 598 246 0 0 chr17 22388515 22388641 -67115912 + FLAM_A SINE Alu 1 126 -16 932 256 101 25 chr17 22388684 22389111 -67115442 + MLT1G1 LTR MaLR 45 593 -2 1151 207 41 7 chr17 22390476 22390766 -67113787 + L1MB8 LINE L1 4771 5070 -1076 331 179 48 0 chr17 22390770 22390854 -67113699 + L1MB8 LINE L1 5114 5201 -945 851 142 8 0 chr17 22390856 22390976 -67113577 + FLAM_C SINE Alu 1 121 -22 28 29 0 0 chr17 22390976 22391011 -67113542 + AT_rich Low_complexity Low_complexity 1 35 0 3743 163 24 17 chr17 22391018 22391940 -67112613 + L1MB8 LINE L1 5188 6177 -1 27 62 0 0 chr17 22392444 22392492 -67112061 + AT_rich Low_complexity Low_complexity 1 48 0 398 327 59 0 chr17 22393122 22393275 -67111278 + L2 LINE L2 2722 2883 -431 1086 73 0 0 chr17 22393537 22393673 -67110880 + AluSq/x SINE Alu 1 136 -177 225 0 0 0 chr17 22393692 22393717 -67110836 + (A)n Simple_repeat Simple_repeat 1 25 0 1838 154 3 13 chr17 22395793 22396092 -67108461 - AluJb SINE Alu -16 296 1 2020 81 0 11 chr17 22396418 22396689 -67107864 - AluY SINE Alu -4 307 40 351 0 0 0 chr17 22397152 22397191 -67107362 + (TG)n Simple_repeat Simple_repeat 2 40 0 3649 191 68 6 chr17 22398940 22399190 -67105363 + L1PB3 LINE L1 4109 4342 -1804 207 114 0 0 chr17 22399190 22399225 -67105328 + (CAA)n Simple_repeat Simple_repeat 3 37 0 3649 191 68 6 chr17 22399225 22399816 -67104737 + L1PB3 LINE L1 4342 5002 -1144 784 165 0 0 chr17 22399826 22399947 -67104606 + FLAM_C SINE Alu 12 132 -11 643 103 0 10 chr17 22399967 22400064 -67104489 + L1PB3 LINE L1 6025 6120 -34 234 0 0 0 chr17 22400064 22400090 -67104463 + (TA)n Simple_repeat Simple_repeat 2 27 0 492 62 0 0 chr17 22400090 22400155 -67104398 - Alu SINE Alu -8 303 239 1796 123 11 0 chr17 22400157 22400426 -67104127 + AluSp SINE Alu 42 313 0 5672 110 27 10 chr17 22400429 22401396 -67103157 + L1PB3 LINE L1 5157 6154 0 1065 226 63 19 chr17 22401644 22401914 -67102639 + AluJo SINE Alu 1 282 -30 433 307 184 27 chr17 22402543 22402875 -67101678 - L2 LINE L2 -1 3312 2929 1690 297 69 14 chr17 22402881 22403545 -67101008 + L1MC/D LINE L1 40 740 -5656 285 228 28 72 chr17 22403589 22403769 -67100784 + L1MC/D LINE L1 1028 1199 -5197 1526 253 42 48 chr17 22403828 22403880 -67100673 + L1MC/D LINE L1 1944 1995 -4401 1809 114 19 4 chr17 22403880 22404142 -67100411 - L1PB1 LINE L1 -7 6144 5879 1526 253 42 48 chr17 22404142 22404667 -67099886 + L1MC/D LINE L1 1995 2517 -3879 1161 61 0 0 chr17 22404688 22404820 -67099733 + AluY SINE Alu 1 132 -179 3864 234 94 69 chr17 22404826 22405089 -67099464 + L1MC/D LINE L1 2478 2733 -3482 2207 48 100 0 chr17 22405089 22405360 -67099193 - AluY SINE Alu -13 298 1 3864 234 94 69 chr17 22405360 22405774 -67098779 + L1MC/D LINE L1 2733 3135 -3080 2036 168 48 11 chr17 22405774 22406126 -67098427 + MLT1A1 LTR MaLR 1 365 0 3864 234 94 69 chr17 22406126 22406732 -67097821 + L1MC/D LINE L1 3135 3822 -2393 2949 160 14 14 chr17 22406732 22407244 -67097309 + L1MC1 LINE L1 5821 6332 -1 3864 234 94 69 chr17 22407244 22407728 -67096825 + L1MC/D LINE L1 3822 4292 -1923 691 271 68 0 chr17 22407728 22407905 -67096648 + MER58A DNA MER1_type 2 190 -34 951 224 4 35 chr17 22408018 22408272 -67096281 + L1MC/D LINE L1 5422 5667 -2187 426 247 149 13 chr17 22408260 22408414 -67096139 + L1MA10 LINE L1 6151 6325 -9 * 223 303 36 85 chr17 22408536 22408701 -67095852 - L2 LINE L2 -572 2742 2586 725 255 32 37 chr17 22409869 22410085 -67094468 - MIR SINE MIR -25 237 23 183 162 0 0 chr17 22410299 22410336 -67094217 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr17 22410443 22410464 -67094089 + AT_rich Low_complexity Low_complexity 1 21 0 2290 123 0 0 chr17 22410471 22410781 -67093772 + AluSg SINE Alu 1 310 0 441 283 179 31 chr17 22411241 22411464 -67093089 + L2 LINE L2 1652 1907 -1407 2242 96 17 0 chr17 22412224 22412525 -67092028 + AluSc SINE Alu 1 306 -3 2465 41 41 0 chr17 22412530 22412824 -67091729 + AluY SINE Alu 1 306 -5 186 43 0 0 chr17 22413391 22413414 -67091139 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2945 285 102 32 chr17 22414378 22415794 -67088759 - L2 LINE L2 -6 3307 1778 361 315 11 0 chr17 22416366 22416455 -67088098 + MER58A DNA MER1_type 1 90 -17 321 261 0 0 chr17 22416461 22416526 -67088027 + MER58A DNA MER1_type 160 224 0 227 325 48 0 chr17 22416928 22417011 -67087542 - L1MC/D LINE L1 -2043 5765 5679 555 281 108 47 chr17 22417070 22417411 -67087142 - L1MC/D LINE L1 -2062 5746 5385 2212 129 7 0 chr17 22417501 22417811 -67086742 - AluSp SINE Alu -1 312 1 27 0 0 0 chr17 22418150 22418177 -67086376 + AT_rich Low_complexity Low_complexity 1 27 0 189 74 0 0 chr17 22418497 22418524 -67086029 + (T)n Simple_repeat Simple_repeat 1 27 0 2170 137 0 12 chr17 22419273 22419595 -67084958 - 7SLRNA srpRNA srpRNA 0 320 3 21 36 0 0 chr17 22421960 22421988 -67082565 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr17 22422680 22422715 -67081838 + AT_rich Low_complexity Low_complexity 1 35 0 223 200 22 0 chr17 22422935 22422980 -67081573 - L2 LINE L2 -5 3308 3263 2097 113 0 10 chr17 22423552 22423844 -67080709 - AluSg SINE Alu -4 306 18 23 54 0 0 chr17 22424907 22424944 -67079609 + AT_rich Low_complexity Low_complexity 1 37 0 2487 43 3 16 chr17 22425185 22425488 -67079065 - AluY SINE Alu -12 299 1 394 227 0 0 chr17 22425495 22425592 -67078961 + Charlie1 DNA MER1_type 2620 2716 -45 22 0 0 0 chr17 22425593 22425615 -67078938 + AT_rich Low_complexity Low_complexity 1 22 0 645 140 0 0 chr17 22426329 22426422 -67078131 + Tigger7 DNA MER2_type 2395 2487 0 2273 167 19 19 chr17 22427400 22427814 -67076739 + L1MC1 LINE L1 5906 6319 -14 2959 172 17 50 chr17 22428399 22428980 -67075573 + MER68 LTR ERV1 1 562 0 559 269 9 0 chr17 22429341 22429449 -67075104 + FAM SINE Alu 1 109 -76 2374 68 0 13 chr17 22429465 22429776 -67074777 + AluY SINE Alu 1 307 -4 334 327 123 49 chr17 22430783 22431330 -67073223 + L2 LINE L2 1941 2527 -787 710 259 155 0 chr17 22431698 22431891 -67072662 + MER58A DNA MER1_type 2 224 0 701 305 125 9 chr17 22431964 22432292 -67072261 + MLT1L LTR MaLR 5 370 -245 238 276 0 26 chr17 22432352 22432428 -67072125 + MLT1L LTR MaLR 537 610 -5 2182 115 3 19 chr17 22432474 22432788 -67071765 - AluSc SINE Alu 0 309 1 2088 118 3 0 chr17 22432824 22433113 -67071440 + AluSx SINE Alu 1 290 -22 1825 154 3 39 chr17 22433519 22433831 -67070722 - AluJo SINE Alu -11 301 1 1658 162 37 14 chr17 22434548 22434844 -67069709 - AluJo SINE Alu -9 303 1 2412 170 21 28 chr17 22434949 22435385 -67069168 + Tigger2a DNA MER2_type 2 434 0 21 0 0 0 chr17 22435415 22435436 -67069117 + AT_rich Low_complexity Low_complexity 1 21 0 2413 61 7 3 chr17 22435525 22435820 -67068733 + AluY SINE Alu 1 296 -15 216 319 83 38 chr17 22436411 22436568 -67067985 + MIR SINE MIR 58 221 -41 604 136 0 64 chr17 22437230 22437340 -67067213 - U6 snRNA snRNA -1 106 4 2265 82 0 10 chr17 22437340 22437644 -67066909 - AluY SINE Alu -10 301 1 897 64 0 0 chr17 22437946 22438056 -67066497 - AluSg SINE Alu -200 110 1 2419 31 42 0 chr17 22438134 22438422 -67066131 - AluY SINE Alu -11 300 1 2383 88 0 0 chr17 22439931 22440227 -67064326 + AluSx SINE Alu 1 296 -16 335 115 33 0 chr17 22440230 22440291 -67064262 + GA-rich Low_complexity Low_complexity 4 66 0 1477 141 16 21 chr17 22440373 22440615 -67063938 - LOR1b LTR ERV1 0 461 221 2377 93 0 10 chr17 22440630 22440942 -67063611 + AluSc SINE Alu 1 309 0 21 71 0 0 chr17 22441306 22441348 -67063205 + AT_rich Low_complexity Low_complexity 1 42 0 1736 170 0 41 chr17 22442592 22442781 -67061772 - AluJo SINE Alu -8 304 132 2008 127 23 10 chr17 22442781 22443080 -67061473 + AluSx SINE Alu 1 303 -9 1736 170 0 41 chr17 22443080 22443207 -67061346 - AluJo SINE Alu -180 132 1 573 75 0 53 chr17 22443565 22443659 -67060894 + Alu SINE Alu 221 309 0 2075 129 0 10 chr17 22443670 22443981 -67060572 + AluSq SINE Alu 1 308 -5 234 296 81 52 chr17 22444351 22444523 -67060030 - MER5B DNA MER1_type 0 178 2 992 167 0 0 chr17 22445693 22445849 -67058704 - FRAM SINE Alu -23 153 1 3159 211 90 39 chr17 22448066 22448669 -67055884 + L1M4 LINE L1 3482 4148 -1998 2080 113 0 10 chr17 22448669 22448962 -67055591 + AluSx SINE Alu 23 312 0 3159 211 90 39 chr17 22448962 22449273 -67055280 + L1M4 LINE L1 4148 4442 -1704 251 329 25 0 chr17 22449295 22449374 -67055179 + MIR SINE MIR 14 94 -168 4740 113 20 47 chr17 22449897 22450218 -67054335 + L1PA16 LINE L1 5444 5772 -394 2299 106 3 13 chr17 22450218 22450529 -67054024 + AluSq SINE Alu 1 308 -5 4740 113 20 47 chr17 22450529 22450950 -67053603 + L1PA16 LINE L1 5772 6166 0 2401 92 0 3 chr17 22451928 22452234 -67052319 - AluSq SINE Alu -8 305 1 337 178 0 68 chr17 22452182 22452255 -67052298 - AluSg/x SINE Alu -115 187 120 * 377 269 44 0 chr17 22452235 22452396 -67052157 - L1ME LINE L1 -711 5434 5270 457 215 62 84 chr17 22452403 22452668 -67051885 - L1MEd LINE L1 -4903 1216 1076 507 255 123 81 chr17 22452778 22453148 -67051405 + MLT1L LTR MaLR 121 609 -6 22 0 0 0 chr17 22453158 22453180 -67051373 + AT_rich Low_complexity Low_complexity 1 22 0 363 268 102 44 chr17 22453180 22453511 -67051042 - L1MEd LINE L1 -5044 1075 700 405 259 53 47 chr17 22453876 22454046 -67050507 - L1MEd LINE L1 -5943 176 6 340 258 133 13 chr17 22454650 22454875 -67049678 - HAL1 LINE L1 -8 2499 2248 505 311 60 0 chr17 22455669 22455836 -67048717 - HAL1 LINE L1 -814 1693 1517 23 54 0 0 chr17 22455952 22455989 -67048564 + AT_rich Low_complexity Low_complexity 1 37 0 1722 170 0 58 chr17 22456038 22456350 -67048203 - AluSx SINE Alu -18 294 1 2055 134 0 0 chr17 22456377 22456669 -67047884 - AluSx SINE Alu -20 292 1 284 256 12 24 chr17 22457184 22457266 -67047287 - L1ME LINE L1 -517 5604 5524 561 179 89 8 chr17 22457442 22457565 -67046988 - FLAM_A SINE Alu 0 133 1 401 159 0 14 chr17 22457637 22457706 -67046847 + AluSp SINE Alu 136 203 -100 2032 139 0 3 chr17 22458333 22458620 -67045933 + AluSx SINE Alu 1 286 -26 22 0 0 0 chr17 22458909 22458931 -67045622 + AT_rich Low_complexity Low_complexity 1 22 0 397 253 54 81 chr17 22460064 22460242 -67044311 + L2 LINE L2 2051 2217 -1097 751 197 104 6 chr17 22460242 22460425 -67044128 - MER3 DNA MER1_type -4 205 5 397 253 54 81 chr17 22460425 22460578 -67043975 + L2 LINE L2 2217 2373 -941 2010 186 32 22 chr17 22460660 22460755 -67043798 + MLT2D LTR ERVL 1 94 -320 1816 157 26 32 chr17 22460755 22461068 -67043485 - AluJo SINE Alu -1 311 1 2010 186 32 22 chr17 22461068 22461343 -67043210 + MLT2D LTR ERVL 94 365 -49 180 0 0 0 chr17 22461343 22461363 -67043190 + (TC)n Simple_repeat Simple_repeat 2 21 0 231 36 0 0 chr17 22461363 22461391 -67043162 + (CA)n Simple_repeat Simple_repeat 2 29 0 252 0 0 0 chr17 22461390 22461418 -67043135 + (TC)n Simple_repeat Simple_repeat 2 29 0 2010 186 32 22 chr17 22461391 22461448 -67043105 + MLT2D LTR ERVL 364 407 -7 389 296 112 0 chr17 22461561 22461730 -67042823 + L2 LINE L2 2394 2581 -733 2096 99 75 0 chr17 22461988 22462270 -67042283 - AluSx SINE Alu -9 303 1 841 214 92 5 chr17 22462588 22462794 -67041759 + MER58A DNA MER1_type 1 224 0 400 258 61 8 chr17 22462852 22462984 -67041569 + MER103 DNA DNA 28 166 0 8680 53 1 0 chr17 22463467 22465325 -67039228 + L1PA5 LINE L1 4299 6160 0 273 256 0 56 chr17 22465516 22465606 -67038947 - MER103 DNA DNA -78 88 4 377 250 0 18 chr17 22465609 22465777 -67038776 + (CACCAT)n Simple_repeat Simple_repeat 5 169 0 2108 128 30 0 chr17 22466058 22466355 -67038198 + AluSq SINE Alu 1 306 -7 1662 129 8 23 chr17 22467752 22468015 -67036538 + AluSx SINE Alu 43 301 -11 1878 151 10 7 chr17 22468496 22468787 -67035766 + AluSx SINE Alu 1 292 -20 215 304 252 0 chr17 22468810 22468925 -67035628 - MIR SINE MIR -12 250 107 1776 149 0 24 chr17 22469552 22469841 -67034712 + AluSx SINE Alu 30 311 -1 764 214 65 0 chr17 22469841 22469995 -67034558 + AluJo/FRAM SINE Alu 134 297 -15 351 259 0 0 chr17 22469998 22470083 -67034470 - U6 snRNA snRNA -22 85 1 1890 94 0 109 chr17 22470669 22470734 -67033819 - L1P4 LINE L1 -586 5579 5509 1983 123 0 14 chr17 22470734 22471019 -67033534 + AluSx SINE Alu 1 281 -31 2673 71 3 38 chr17 22471019 22471257 -67033296 + THE1A LTR MaLR 2 224 -131 2406 83 0 19 chr17 22471257 22471571 -67032982 + AluSg SINE Alu 1 308 -2 2673 71 3 38 chr17 22471571 22471699 -67032854 + THE1A LTR MaLR 224 355 0 1890 94 0 109 chr17 22471699 22471982 -67032571 - L1P4 LINE L1 -654 5511 5268 3779 88 46 12 chr17 22471982 22472549 -67032004 + L1PA11 LINE L1 5588 6173 -1 2915 16 0 0 chr17 22472885 22473203 -67031350 - AluYb8 SINE Alu 0 318 1 1728 181 30 3 chr17 22474232 22474535 -67030018 + AluJo SINE Alu 1 311 -1 250 138 35 17 chr17 22474538 22474596 -67029957 + GA-rich Low_complexity Low_complexity 4 62 0 312 357 54 9 chr17 22475975 22476199 -67028354 - L1MEc LINE L1 -6014 382 149 1754 191 0 7 chr17 22476450 22476749 -67027804 + AluJb SINE Alu 1 297 -15 368 224 140 14 chr17 22476759 22476902 -67027651 + L1MB3 LINE L1 5317 5477 -2331 1899 147 0 29 chr17 22477133 22477446 -67027107 - AluJo SINE Alu -8 304 1 387 261 7 29 chr17 22477740 22477878 -67026675 - L1M4 LINE L1 -1447 4699 4565 603 207 44 58 chr17 22479052 22479240 -67025313 - MER6 DNA MER2_type -1 864 -52 319 220 22 44 chr17 22479345 22479436 -67025117 + MIR3 SINE MIR 72 160 -48 987 186 72 0 chr17 22479572 22479766 -67024787 - MER3 DNA MER1_type -1 208 1 490 291 50 6 chr17 22479878 22480060 -67024493 + MIR SINE MIR 1 190 -72 295 243 0 0 chr17 22480183 22480261 -67024292 - L1ME LINE L1 -374 5747 5670 225 222 19 0 chr17 22480272 22480326 -67024227 - L1ME LINE L1 -526 5595 5541 292 294 12 0 chr17 22480361 22480446 -67024107 - L1MB3 LINE L1 -268 5915 5830 2534 80 3 0 chr17 22480717 22481029 -67023524 + AluSp SINE Alu 1 313 0 21 0 0 0 chr17 22481500 22481521 -67023032 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr17 22481618 22481639 -67022914 + (GA)n Simple_repeat Simple_repeat 2 22 0 814 228 0 0 chr17 22481639 22481784 -67022769 - FRAM SINE Alu -34 142 1 1482 203 37 23 chr17 22482436 22482785 -67021768 + L1MB3 LINE L1 5830 6183 0 1592 182 3 38 chr17 22483917 22484235 -67020318 + AluJo SINE Alu 1 307 -5 343 356 12 36 chr17 22485110 22485357 -67019196 + L1M4 LINE L1 3777 4017 -2129 42 0 0 0 chr17 22485382 22485424 -67019129 + AT_rich Low_complexity Low_complexity 1 42 0 1831 130 92 3 chr17 22485559 22485843 -67018710 + AluSc SINE Alu 1 309 0 1268 253 24 24 chr17 22486363 22486742 -67017811 + HAL1 LINE L1 15 393 -2114 2257 233 139 59 chr17 22486766 22486858 -67017695 + HAL1 LINE L1 504 587 -1920 1864 125 68 0 chr17 22486858 22487137 -67017416 - AluSx SINE Alu -14 298 1 2257 233 139 59 chr17 22487137 22487569 -67016984 + HAL1 LINE L1 587 983 -1524 2365 151 8 8 chr17 22487569 22487967 -67016586 + L1MB2 LINE L1 5773 6170 -1 2257 233 139 59 chr17 22487967 22488635 -67015918 + HAL1 LINE L1 983 1793 -714 1009 259 144 35 chr17 22488649 22489254 -67015299 + HAL1 LINE L1 1837 2507 0 296 256 106 39 chr17 22489449 22489629 -67014924 + L1ME LINE L1 5469 5660 -461 1477 176 3 88 chr17 22489702 22490021 -67014532 - AluJo SINE Alu -17 295 4 1797 186 8 32 chr17 22490046 22490422 -67014131 - L1MB5 LINE L1 -6 6168 5802 1143 184 29 21 chr17 22490426 22490665 -67013888 - MER68 LTR ERV1 -25 537 297 1163 92 13 2 chr17 22490666 22490905 -67013648 + AluSp SINE Alu 2 292 -21 1357 170 112 4 chr17 22490905 22491182 -67013371 - MER68 LTR ERV1 -255 307 1 1304 119 0 6 chr17 22492365 22492541 -67012012 + AluJb SINE Alu 1 175 -137 610 204 0 0 chr17 22492635 22492794 -67011759 + AluY SINE Alu 170 328 0 2226 120 3 3 chr17 22492916 22493224 -67011329 - AluSx SINE Alu -3 309 2 325 145 0 48 chr17 22493372 22493434 -67011119 + L1M4 LINE L1 5204 5262 -884 1109 155 0 12 chr17 22493474 22493642 -67010911 - FRAM SINE Alu -10 166 1 2421 77 0 16 chr17 22494216 22494528 -67010025 + AluSq SINE Alu 1 307 -6 2267 90 20 0 chr17 22494532 22494833 -67009720 + AluSx SINE Alu 1 307 -5 2420 42 42 0 chr17 22494838 22495124 -67009429 + AluY SINE Alu 1 298 -13 243 0 0 0 chr17 22495692 22495719 -67008834 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 237 65 0 0 chr17 22496601 22496632 -67007921 + (T)n Simple_repeat Simple_repeat 1 31 0 476 296 147 47 chr17 22496688 22497149 -67007404 - L2 LINE L2 -6 3307 2799 2553 279 94 24 chr17 22497167 22498217 -67006336 - L2 LINE L2 -413 2901 1778 308 348 11 0 chr17 22498789 22498878 -67005675 + MER58A DNA MER1_type 1 90 -17 311 277 0 0 chr17 22498884 22498949 -67005604 + MER58A DNA MER1_type 160 224 0 459 281 122 50 chr17 22499464 22499841 -67004712 - L1MC/D LINE L1 -462 5659 5385 2240 119 10 0 chr17 22499931 22500241 -67004312 - AluSp SINE Alu 0 313 1 27 0 0 0 chr17 22500580 22500607 -67003946 + AT_rich Low_complexity Low_complexity 1 27 0 2235 123 0 19 chr17 22501696 22502020 -67002533 - 7SLRNA srpRNA srpRNA 0 320 3 21 36 0 0 chr17 22504385 22504413 -67000140 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr17 22505105 22505140 -66999413 + AT_rich Low_complexity Low_complexity 1 35 0 229 200 22 0 chr17 22505360 22505405 -66999148 - L2 LINE L2 -5 3308 3263 2147 116 0 10 chr17 22505978 22506270 -66998283 - AluSg SINE Alu -4 306 18 23 54 0 0 chr17 22507332 22507369 -66997184 + AT_rich Low_complexity Low_complexity 1 37 0 2593 54 0 0 chr17 22507609 22507907 -66996646 - AluY SINE Alu -13 298 1 567 224 129 0 chr17 22508033 22508203 -66996350 + Charlie1 DNA MER1_type 8 199 -2562 2477 62 3 0 chr17 22508248 22508556 -66995997 - AluY SINE Alu -2 309 1 375 216 0 0 chr17 22508563 22508660 -66995893 + Charlie1 DNA MER1_type 2620 2716 -45 22 0 0 0 chr17 22508661 22508683 -66995870 + AT_rich Low_complexity Low_complexity 1 22 0 546 153 0 0 chr17 22509404 22509489 -66995064 + Tigger7 DNA MER2_type 2403 2487 0 2163 164 19 19 chr17 22510472 22510886 -66993667 + L1MC1 LINE L1 5906 6319 -14 23 0 0 0 chr17 22511412 22511435 -66993118 + AT_rich Low_complexity Low_complexity 1 23 0 2708 178 17 50 chr17 22511471 22512051 -66992502 + MER68 LTR ERV1 1 561 -1 549 269 9 0 chr17 22512412 22512520 -66992033 + FAM SINE Alu 1 109 -76 2361 74 0 13 chr17 22512536 22512846 -66991707 + AluY SINE Alu 1 306 -5 363 313 130 57 chr17 22513851 22514397 -66990156 + L2 LINE L2 1942 2527 -787 185 232 74 116 chr17 22514585 22514680 -66989873 - MER5C DNA MER1_type -219 105 15 647 259 155 0 chr17 22514766 22514959 -66989594 + MER58A DNA MER1_type 2 224 0 404 306 128 19 chr17 22515032 22515297 -66989256 + MLT1L LTR MaLR 5 298 -317 287 246 0 0 chr17 22515404 22515469 -66989084 + MLT1L LTR MaLR 546 610 -5 1266 118 0 0 chr17 22515515 22515685 -66988868 - AluSg/x SINE Alu 0 312 143 1752 75 5 0 chr17 22518251 22518465 -66986088 + AluSp SINE Alu 85 299 -14 29 0 0 0 chr17 22518564 22518593 -66985960 + AT_rich Low_complexity Low_complexity 1 29 0 2981 209 64 9 chr17 22519542 22520643 -66983910 - Charlie1a DNA MER1_type -227 1228 5 638 268 33 70 chr17 22520695 22520908 -66983645 - MIR SINE MIR -5 257 53 314 266 11 11 chr17 22520943 22521037 -66983516 + L2 LINE L2 3220 3313 0 785 294 43 29 chr17 22521363 22521778 -66982775 - L1MC4a LINE L1 -1741 6067 5647 2459 82 0 7 chr17 22524160 22524463 -66980090 - AluY SINE Alu -9 302 2 2289 158 80 5 chr17 22524964 22525362 -66979191 - MSTA LTR MaLR 0 428 1 225 94 0 0 chr17 22525368 22525400 -66979153 + (A)n Simple_repeat Simple_repeat 1 32 0 625 273 6 36 chr17 22525459 22525624 -66978929 + MER58A DNA MER1_type 1 160 0 1608 163 55 23 chr17 22525637 22525944 -66978609 - MLT1A1 LTR MaLR -30 335 19 334 167 0 15 chr17 22525959 22526025 -66978528 + MER58A DNA MER1_type 160 224 0 1813 99 0 12 chr17 22526749 22526991 -66977562 + AluSq SINE Alu 1 239 -74 1906 118 7 30 chr17 22528218 22528335 -66976218 + AluSx SINE Alu 23 141 -171 2519 61 3 10 chr17 22528335 22528648 -66975905 + AluY SINE Alu 1 311 0 1906 118 7 30 chr17 22528648 22528826 -66975727 + AluSx SINE Alu 141 311 -1 235 333 16 0 chr17 22528979 22529042 -66975511 + MIR SINE MIR 14 77 -185 249 199 145 99 chr17 22529045 22529176 -66975377 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22530246 22530274 -66974279 + AT_rich Low_complexity Low_complexity 1 28 0 256 206 145 99 chr17 22530573 22530704 -66973849 - MIR SINE MIR -82 180 44 208 250 23 0 chr17 22530707 22530751 -66973802 - MIR SINE MIR -185 77 33 355 261 126 8 chr17 22531323 22531442 -66973111 + MIR SINE MIR 7 139 -123 590 269 150 67 chr17 22531455 22531816 -66972737 - L2 LINE L2 -20 3252 2862 520 291 53 27 chr17 22532079 22532229 -66972324 + MIR3 SINE MIR 33 185 -42 202 306 0 0 chr17 22532631 22532716 -66971837 + (CCA)n Simple_repeat Simple_repeat 3 87 0 368 278 31 63 chr17 22533723 22533914 -66970639 + MIR SINE MIR 28 212 -50 4479 247 103 48 chr17 22535671 22535938 -66968615 + HAL1 LINE L1 102 353 -2154 2423 83 0 3 chr17 22535938 22536239 -66968314 + AluY SINE Alu 1 300 -11 4479 247 103 48 chr17 22536239 22536908 -66967645 + HAL1 LINE L1 353 984 -1523 1982 166 0 0 chr17 22536908 22537204 -66967349 - AluJb SINE Alu -16 296 1 4479 247 103 48 chr17 22537204 22538426 -66966127 + HAL1 LINE L1 984 2380 -127 3645 52 0 0 chr17 22538496 22538939 -66965614 + L1PA6 LINE L1 5711 6153 -1 2330 88 10 10 chr17 22538944 22539249 -66965304 + AluY SINE Alu 1 305 -6 27 0 0 0 chr17 22539275 22539302 -66965251 + AT_rich Low_complexity Low_complexity 1 27 0 461 298 13 20 chr17 22539891 22540063 -66964490 + MIR SINE MIR 3 174 -88 180 415 11 11 chr17 22541167 22541261 -66963292 + MIR SINE MIR 48 141 -67 329 276 118 7 chr17 22543750 22543902 -66960651 + MIR3 SINE MIR 33 201 -7 406 228 55 16 chr17 22543981 22544108 -66960445 + MIR SINE MIR 20 151 -111 203 323 90 13 chr17 22544627 22544776 -66959777 - MIR SINE MIR -72 136 11 313 183 46 137 chr17 22544808 22544939 -66959614 - MIR SINE MIR -64 144 26 5953 128 26 25 chr17 22545348 22546285 -66958268 - LTR5 LTR ERVK 0 969 32 448 258 65 0 chr17 22547698 22547822 -66956731 + MIR SINE MIR 88 219 -43 306 274 108 38 chr17 22547847 22548033 -66956520 - L2 LINE L2 -12 3301 3103 180 326 22 56 chr17 22549470 22549559 -66954994 + MIR SINE MIR 61 146 -62 232 250 48 77 chr17 22550843 22550947 -66953606 - MIR SINE MIR -60 148 48 296 306 43 31 chr17 22559208 22559466 -66945087 + L2 LINE L2 2498 2758 -556 283 312 110 0 chr17 22560680 22560789 -66943764 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 22561120 22561144 -66943409 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 355 309 88 0 chr17 22561759 22561895 -66942658 + MIR SINE MIR 81 228 -34 2141 158 35 2 chr17 22562857 22563257 -66941296 + L1PB4 LINE L1 5539 5951 -205 1418 39 0 134 chr17 22563257 22563489 -66941064 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 22563557 22563632 -66940921 - MIR SINE MIR -133 129 56 534 288 76 0 chr17 22563682 22563866 -66940687 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 22563893 22563973 -66940580 - MER3 DNA MER1_type -5 204 125 2332 78 3 3 chr17 22563974 22564282 -66940271 + AluY SINE Alu 1 308 -3 216 333 16 0 chr17 22564374 22564437 -66940116 + MIR SINE MIR 14 77 -185 223 223 146 92 chr17 22564440 22564570 -66939983 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22564869 22564897 -66939656 + AT_rich Low_complexity Low_complexity 1 28 0 190 214 145 99 chr17 22565967 22566098 -66938455 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 22566101 22566164 -66938389 - MIR SINE MIR -185 77 14 2027 138 3 0 chr17 22566327 22566638 -66937915 - AluSx SINE Alu 0 312 1 1676 230 29 27 chr17 22566638 22566702 -66937851 - MLT1C-int LTR MaLR -749 622 560 1483 174 37 27 chr17 22566702 22566996 -66937557 - AluSx SINE Alu -15 297 1 1676 230 29 27 chr17 22566996 22567366 -66937187 - MLT1C-int LTR MaLR -811 560 184 1979 144 10 0 chr17 22567621 22567926 -66936627 + AluSq SINE Alu 1 308 -5 232 359 33 0 chr17 22568058 22568150 -66936403 + L2 LINE L2 3192 3286 -27 1218 239 87 34 chr17 22568793 22569229 -66935324 - MLT1C LTR MaLR 0 467 9 2183 59 10 7 chr17 22569655 22569944 -66934609 + AluY SINE Alu 17 306 -5 2154 92 3 0 chr17 22570416 22570711 -66933842 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 22570730 22570888 -66933665 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 22570944 22570995 -66933558 + (CGG)n Simple_repeat Simple_repeat 2 52 0 222 292 22 11 chr17 22571425 22571514 -66933039 + G-rich Low_complexity Low_complexity 1 90 0 248 322 11 35 chr17 22571600 22571774 -66932779 + G-rich Low_complexity Low_complexity 2 171 0 261 349 17 11 chr17 22571890 22572065 -66932488 + GA-rich Low_complexity Low_complexity 4 179 0 367 287 0 48 chr17 22572067 22572305 -66932248 + G-rich Low_complexity Low_complexity 1 226 0 342 339 6 18 chr17 22572250 22572421 -66932132 + GA-rich Low_complexity Low_complexity 1 169 0 * 879 184 6 0 chr17 22573402 22573560 -66930993 + AluJb SINE Alu 1 159 -153 2190 83 41 0 chr17 22575215 22575505 -66929048 - AluYa5 SINE Alu -9 302 1 402 68 17 0 chr17 22576568 22576627 -66927926 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 22577084 22577383 -66927170 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 22577403 22577427 -66927126 + AT_rich Low_complexity Low_complexity 1 24 0 382 332 45 68 chr17 22577875 22578112 -66926441 + HAL1 LINE L1 904 1136 -1371 1872 85 4 0 chr17 22578112 22578360 -66926193 + AluY SINE Alu 1 249 -62 382 332 45 68 chr17 22578360 22578387 -66926166 + HAL1 LINE L1 1136 1162 -1345 208 387 77 5 chr17 22578396 22578590 -66925963 + L2 LINE L2 2542 2749 -565 4028 137 71 18 chr17 22578612 22579356 -66925197 - L1PA10 LINE L1 0 6168 5385 577 255 13 110 chr17 22579617 22579849 -66924704 + LTR41 LTR ERVL 469 722 -73 1012 75 90 232 chr17 22579849 22579935 -66924618 - MER30 DNA MER1_type -1 229 132 1900 127 7 13 chr17 22579935 22580234 -66924319 + AluSx SINE Alu 1 297 -15 1991 115 27 10 chr17 22580236 22580531 -66924022 + AluSc SINE Alu 1 300 -9 1012 75 90 232 chr17 22580531 22580708 -66923845 - MER30 DNA MER1_type -99 131 1 577 255 13 110 chr17 22580708 22580810 -66923743 + LTR41 LTR ERVL 722 791 -4 259 326 186 33 chr17 22580812 22581271 -66923282 + L2 LINE L2 2787 3312 -1 576 285 43 24 chr17 22581325 22581578 -66922975 + MIR SINE MIR 2 259 -3 1376 293 39 21 chr17 22585557 22586223 -66918330 - L1MC3 LINE L1 -1629 6156 5479 203 349 28 46 chr17 22590948 22591057 -66913496 + MIR SINE MIR 82 188 -74 1421 179 111 29 chr17 22591451 22591792 -66912761 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 22592340 22592365 -66912188 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 223 167 24 0 chr17 22592852 22592894 -66911659 + C-rich Low_complexity Low_complexity 4 46 0 228 318 0 11 chr17 22593193 22593281 -66911272 + GA-rich Low_complexity Low_complexity 2 88 0 711 292 36 24 chr17 22593334 22593584 -66910969 + MER89-int LTR ERV1 1407 1659 -5142 323 261 134 32 chr17 22595012 22595169 -66909384 + L1MEc LINE L1 1916 2088 -4308 435 63 0 0 chr17 22595172 22595235 -66909318 + (TA)n Simple_repeat Simple_repeat 2 64 0 1474 193 3 14 chr17 22595248 22595533 -66909020 - AluJb SINE Alu -30 282 1 1355 0 0 6 chr17 22595560 22595716 -66908837 + (TCTCCC)n Simple_repeat Simple_repeat 1 155 0 5667 66 62 8 chr17 22595738 22596849 -66907704 + SVA Other Other 2 1386 0 23 0 0 0 chr17 22596884 22596907 -66907646 + AT_rich Low_complexity Low_complexity 1 23 0 831 245 13 52 chr17 22596947 22597180 -66907373 + MER58A DNA MER1_type 1 224 0 496 255 98 0 chr17 22597182 22597335 -66907218 - L2 LINE L2 -653 2661 2494 2301 89 0 13 chr17 22597425 22597739 -66906814 + AluY SINE Alu 1 310 -1 1740 159 29 76 chr17 22598205 22598614 -66905939 + MLT1B LTR MaLR 1 390 0 361 209 7 27 chr17 22599535 22599683 -66904870 + CT-rich Low_complexity Low_complexity 1 145 0 180 156 16 47 chr17 22599729 22599793 -66904760 + CT-rich Low_complexity Low_complexity 5 66 0 2039 179 13 98 chr17 22599891 22600216 -66904337 + L1MB5 LINE L1 5380 5644 -530 1815 115 0 7 chr17 22600216 22600483 -66904070 + L1PB1 LINE L1 5883 6150 -1 2039 179 13 98 chr17 22600483 22600687 -66903866 + L1MB5 LINE L1 5644 5864 -310 1248 229 6 16 chr17 22600716 22601030 -66903523 + AluJo SINE Alu 1 311 -1 2055 129 0 0 chr17 22601037 22601332 -66903221 + AluSc SINE Alu 7 301 -8 2345 71 19 84 chr17 22601936 22602303 -66902250 - LTR14A LTR ERVK -1 343 1 187 189 68 81 chr17 22602371 22602445 -66902108 - MIR SINE MIR -78 130 58 511 288 76 0 chr17 22602496 22602680 -66901873 - L2 LINE L2 0 3313 3116 324 203 38 25 chr17 22602707 22602786 -66901767 - MER3 DNA MER1_type -5 204 125 1110 60 0 0 chr17 22602787 22602921 -66901632 + AluY SINE Alu 1 134 -177 2000 127 24 3 chr17 22602921 22603215 -66901338 + AluY SINE Alu 1 298 -13 1813 116 4 0 chr17 22604383 22604633 -66899920 + AluSx SINE Alu 53 303 -9 2215 119 6 0 chr17 22605010 22605321 -66899232 - AluSp SINE Alu 0 313 1 495 224 80 0 chr17 22605490 22605646 -66898907 - MER3 DNA MER1_type -55 154 1 300 283 214 26 chr17 22605739 22606085 -66898468 - L2 LINE L2 -351 2963 2553 261 178 314 8 chr17 22606680 22606798 -66897755 + L2 LINE L2 2895 3048 -265 378 323 15 8 chr17 22606841 22606971 -66897582 + L2 LINE L2 3136 3266 -6 262 278 14 0 chr17 22607073 22607145 -66897408 - MIR SINE MIR -74 134 62 203 94 0 0 chr17 22607964 22607996 -66896557 + L2 LINE L2 2923 2954 -360 202 364 68 17 chr17 22608164 22608340 -66896213 + MIR3 SINE MIR 7 191 -17 1309 266 69 47 chr17 22608885 22609508 -66895045 + L1MC4a LINE L1 5256 5892 -1916 346 291 113 0 chr17 22610081 22610222 -66894331 - MIR SINE MIR -101 161 5 331 285 254 29 chr17 22610572 22610986 -66893567 - MER69 DNA AcHobo -1019 207 31 227 270 95 0 chr17 22611699 22611762 -66892791 + L2 LINE L2 3148 3216 -56 315 250 143 0 chr17 22611874 22611958 -66892595 - MIR SINE MIR -117 145 50 316 228 39 47 chr17 22612559 22612580 -66891973 + L1MC4 LINE L1 7913 7933 -109 2040 163 0 7 chr17 22612580 22612887 -66891666 + AluSx SINE Alu 1 305 -7 316 228 39 47 chr17 22612887 22612992 -66891561 + L1MC4 LINE L1 7933 8038 -4 434 302 83 53 chr17 22613158 22613496 -66891057 - L1ME4a LINE L1 -224 5897 5550 1626 130 4 0 chr17 22613540 22613770 -66890783 + AluSq SINE Alu 68 298 -15 703 276 105 16 chr17 22613842 22614212 -66890341 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 22614295 22614318 -66890235 + AT_rich Low_complexity Low_complexity 1 23 0 1346 62 0 4 chr17 22614811 22615024 -66889529 - AluY SINE Alu -8 303 1 229 25 0 50 chr17 22615109 22615149 -66889404 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 462 222 68 12 chr17 22615214 22615376 -66889177 - L1ME4a LINE L1 -1 6120 5950 352 226 97 86 chr17 22615481 22615667 -66888886 - L1 LINE L1 -2984 3162 2975 3886 124 50 19 chr17 22616154 22616797 -66887756 + THE1C-int LTR MaLR 918 1580 0 2014 146 52 22 chr17 22616797 22617161 -66887392 + THE1C LTR MaLR 1 375 0 1564 209 0 22 chr17 22617487 22617803 -66886750 - AluJo SINE Alu -1 311 3 1812 130 47 0 chr17 22622187 22622463 -66882090 + AluY SINE Alu 13 301 -10 712 294 17 0 chr17 22623088 22623265 -66881288 - MIR SINE MIR -3 259 80 213 346 86 25 chr17 22623328 22623490 -66881063 + MER5B DNA MER1_type 7 178 0 185 355 58 16 chr17 22623642 22623763 -66880790 + L2 LINE L2 3143 3268 -4 609 208 0 21 chr17 22624118 22624375 -66880178 + AluJo SINE Alu 9 295 -17 1551 182 0 14 chr17 22624389 22624669 -66879884 + AluJb SINE Alu 16 291 -21 322 256 13 32 chr17 22624848 22625004 -66879549 + GA-rich Low_complexity Low_complexity 2 154 0 1849 130 3 42 chr17 22626731 22627039 -66877514 - AluY SINE Alu -5 306 11 218 206 145 99 chr17 22627843 22627974 -66876579 - MIR SINE MIR -82 180 44 235 333 16 0 chr17 22627977 22628040 -66876513 - MIR SINE MIR -185 77 14 1583 209 3 0 chr17 22628197 22628504 -66876049 - AluSx SINE Alu 0 312 5 680 251 10 36 chr17 22628572 22628767 -66875786 - AluSg/x SINE Alu -15 297 108 23 0 0 0 chr17 22628872 22628895 -66875658 + AT_rich Low_complexity Low_complexity 1 23 0 363 295 15 25 chr17 22628972 22629172 -66875381 - L1ME4a LINE L1 -194 5927 5730 225 0 0 0 chr17 22629225 22629250 -66875303 + (TG)n Simple_repeat Simple_repeat 2 26 0 715 239 6 19 chr17 22629253 22629412 -66875141 - AluJo SINE Alu -31 281 125 308 263 85 34 chr17 22629418 22629536 -66875017 - L1ME4a LINE L1 -439 5682 5559 1455 184 0 12 chr17 22629774 22630029 -66874524 + AluSx SINE Alu 1 252 -60 798 199 41 0 chr17 22630129 22630300 -66874253 - L1M4b LINE L1 -6675 184 7 296 127 16 16 chr17 22630303 22630366 -66874187 + MLT1E1 LTR MaLR 587 649 -5 2348 87 7 3 chr17 22630537 22630837 -66873716 - AluSp SINE Alu -12 301 1 224 248 238 9 chr17 22630993 22631098 -66873455 - MIR SINE MIR -17 245 117 2119 117 8 72 chr17 22631494 22631854 -66872699 - MER1B DNA MER1_type 0 337 1 681 284 91 35 chr17 22632181 22632667 -66871886 + L1ME4a LINE L1 5608 6120 -1 182 274 0 119 chr17 22632700 22632747 -66871806 + MIR3 SINE MIR 106 140 -68 1594 149 0 0 chr17 22632747 22632975 -66871578 + AluJb SINE Alu 85 312 0 182 274 0 119 chr17 22632975 22633011 -66871542 + MIR3 SINE MIR 140 179 -29 1702 163 48 17 chr17 22634860 22635155 -66869398 - AluJo SINE Alu -7 305 2 2240 141 0 3 chr17 22636113 22636426 -66868127 - AluSx SINE Alu 0 312 1 2235 105 0 54 chr17 22636622 22636937 -66867616 - AluY SINE Alu -13 298 1 380 232 0 0 chr17 22636957 22637052 -66867501 - L1ME2 LINE L1 -6 6158 6064 388 311 148 27 chr17 22637870 22638053 -66866500 + MIR SINE MIR 34 238 -24 2026 133 0 20 chr17 22638154 22638454 -66866099 - AluJb SINE Alu -18 294 1 475 226 73 0 chr17 22638454 22638591 -66865962 + Charlie1 DNA MER1_type 71 217 -2544 433 172 54 0 chr17 22638605 22638698 -66865855 + Charlie1 DNA MER1_type 2634 2731 -30 247 250 52 73 chr17 22638734 22638830 -66865723 + MIR SINE MIR 162 255 -7 1606 180 50 3 chr17 22639761 22640044 -66864509 + AluJo SINE Alu 3 298 -14 2278 101 0 29 chr17 22640578 22640885 -66863668 + AluSx SINE Alu 1 298 -14 2141 111 0 4 chr17 22640943 22641255 -66863298 + AluSc SINE Alu 1 311 0 21 71 0 0 chr17 22642796 22642838 -66861715 + AT_rich Low_complexity Low_complexity 1 42 0 1785 128 6 68 chr17 22643844 22644180 -66860373 + MER1B DNA MER1_type 1 315 -24 1019 224 9 0 chr17 22644238 22644452 -66860101 - MER20 DNA MER1_type 0 219 4 279 327 9 9 chr17 22644479 22644592 -66859961 - L2 LINE L2 -951 2363 2251 353 320 50 50 chr17 22644889 22645070 -66859483 - MIR SINE MIR -54 208 28 180 200 0 0 chr17 22645890 22645935 -66858618 + (TG)n Simple_repeat Simple_repeat 1 45 0 480 277 12 0 chr17 22645977 22646143 -66858410 + (TG)n Simple_repeat Simple_repeat 1 168 0 204 229 16 0 chr17 22646163 22646224 -66858329 + (TG)n Simple_repeat Simple_repeat 1 62 0 234 195 0 0 chr17 22646267 22646308 -66858245 + L2 LINE L2 3016 3056 -216 291 304 0 13 chr17 22646454 22646533 -66858020 + L2 LINE L2 3190 3267 -5 507 234 221 0 chr17 22646891 22647036 -66857517 - MER5A DNA MER1_type 0 189 13 2089 117 37 0 chr17 22647230 22647530 -66857023 + AluY SINE Alu 1 311 0 300 212 188 12 chr17 22647588 22647725 -66856828 + MIR SINE MIR 16 183 -62 190 266 0 62 chr17 22647785 22647849 -66856704 + MIR SINE MIR 93 149 -59 423 256 248 21 chr17 22647942 22648180 -66856373 + L2 LINE L2 3021 3312 -1 279 346 96 13 chr17 22648768 22648924 -66855629 + MIR SINE MIR 13 181 -81 190 206 0 0 chr17 22648924 22648958 -66855595 + MER5A DNA MER1_type 1 34 -155 1970 133 0 7 chr17 22649421 22649700 -66854853 - AluSx SINE Alu -35 277 1 363 239 86 34 chr17 22649938 22650055 -66854498 + L1ME4a LINE L1 5559 5681 -440 775 241 6 13 chr17 22650062 22650220 -66854333 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 22650223 22650250 -66854303 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 600 224 102 102 chr17 22650301 22650693 -66853860 + L1ME4a LINE L1 5730 6121 0 813 206 92 90 chr17 22650961 22651383 -66853170 + MER113 DNA MER1_type? 48 470 -51 356 229 171 0 chr17 22651483 22651588 -66852965 + L2 LINE L2 3149 3271 -1 374 283 294 6 chr17 22652011 22652188 -66852365 - MIR SINE MIR -29 233 6 243 301 135 23 chr17 22652332 22652465 -66852088 - L2 LINE L2 -6 3266 3119 406 274 105 20 chr17 22653102 22653255 -66851298 + MIR3 SINE MIR 20 185 -23 441 265 38 0 chr17 22654289 22654421 -66850132 + MIR SINE MIR 56 192 -70 183 261 46 0 chr17 22655318 22655383 -66849170 + L2 LINE L2 3145 3212 -60 255 325 111 0 chr17 22656209 22656326 -66848227 - MIR SINE MIR -1 261 132 737 231 214 31 chr17 22656432 22656792 -66847761 - L2 LINE L2 0 3313 2888 551 258 7 26 chr17 22656850 22657005 -66847548 + MER103 DNA DNA 2 153 -13 348 281 21 0 chr17 22658675 22658771 -66845782 - MER5A DNA MER1_type -77 112 15 662 158 9 0 chr17 22659199 22659313 -66845240 - THE1-int LTR MaLR -527 1053 939 1066 147 13 0 chr17 22659366 22659523 -66845030 - AluSg/x SINE Alu -10 302 144 2115 123 3 0 chr17 22659545 22659856 -66844697 - AluSp SINE Alu 0 312 1 204 40 0 0 chr17 22660798 22660823 -66843730 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 763 270 17 0 chr17 22661116 22661294 -66843259 - MIR SINE MIR -3 259 79 417 301 86 25 chr17 22661348 22661511 -66843042 - MER5B DNA MER1_type 0 178 6 319 347 40 18 chr17 22661568 22661790 -66842763 + L2 LINE L2 3083 3309 -4 250 267 128 0 chr17 22661814 22661900 -66842653 + MIR SINE MIR 44 140 -122 253 333 10 0 chr17 22664644 22664740 -66839813 - MIR SINE MIR -129 133 37 250 280 57 105 chr17 22665086 22665418 -66839135 - L2 LINE L2 -51 3221 2906 208 301 54 18 chr17 22665445 22665611 -66838942 - L2 LINE L2 -464 2850 2679 329 213 50 159 chr17 22666347 22666501 -66838052 - MER102b DNA MER1_type -2187 230 114 658 219 0 0 chr17 22666501 22666620 -66837933 - FLAM_A SINE Alu -13 120 2 329 213 50 159 chr17 22666620 22666723 -66837830 - MER102b DNA MER1_type -2303 114 1 582 266 17 17 chr17 22666734 22666907 -66837646 - MIR SINE MIR -70 192 20 1677 122 137 8 chr17 22667648 22667911 -66836642 - AluSg SINE Alu -13 297 1 1975 107 101 3 chr17 22667913 22668241 -66836312 - L1PA11 LINE L1 -10 6164 5805 593 282 33 33 chr17 22669207 22669452 -66835101 + Tigger8 DNA MER2_type 236 480 -186 1693 160 0 63 chr17 22669455 22669773 -66834780 + AluJo SINE Alu 1 298 -14 253 252 81 27 chr17 22671174 22671285 -66833268 - L2 LINE L2 -46 3226 3110 539 295 72 10 chr17 22671826 22672033 -66832520 + MIR SINE MIR 32 251 -11 630 251 53 48 chr17 22672230 22672437 -66832116 - MER102b DNA MER1_type -7 334 127 1984 165 0 3 chr17 22672511 22672802 -66831751 + AluJb SINE Alu 1 290 -22 509 198 69 45 chr17 22672819 22673021 -66831532 + L1MC5 LINE L1 7711 7917 -44 239 313 0 0 chr17 22673034 22673098 -66831455 - MER102b DNA MER1_type -267 74 11 219 354 24 0 chr17 22673256 22673338 -66831215 + MIR SINE MIR 47 130 -132 1493 191 0 41 chr17 22673796 22674124 -66830429 - AluJo SINE Alu 0 316 1 366 272 63 63 chr17 22674161 22674481 -66830072 + L1MC4a LINE L1 5687 5801 -320 1804 173 86 45 chr17 22674488 22674719 -66829834 + MLT1D LTR MaLR 19 276 -229 2109 141 0 10 chr17 22674719 22675032 -66829521 - AluJb SINE Alu 0 312 3 1804 173 86 45 chr17 22675032 22675221 -66829332 + MLT1D LTR MaLR 276 456 -49 346 241 75 23 chr17 22675350 22675483 -66829070 + MIR SINE MIR 46 185 -77 256 170 73 4 chr17 22675951 22676021 -66828532 + MLT1D LTR MaLR 356 456 -39 573 180 0 2 chr17 22676096 22676205 -66828348 - MIR SINE MIR -56 152 45 205 153 153 0 chr17 22677431 22677490 -66827063 + L2 LINE L2 2985 3052 -220 548 273 164 9 chr17 22677506 22677726 -66826827 - MIR SINE MIR 0 262 9 372 184 26 0 chr17 22678548 22678624 -66825929 - MIR SINE MIR -63 145 68 1192 288 149 15 chr17 22679408 22679489 -66825064 + L1ME3 LINE L1 5491 5560 -602 1989 164 0 16 chr17 22679489 22679806 -66824747 + AluJb SINE Alu 1 312 0 1192 288 149 15 chr17 22679806 22680267 -66824286 + L1ME3 LINE L1 5560 6121 -41 1684 178 7 10 chr17 22680267 22680585 -66823968 + AluJo SINE Alu 1 312 0 1192 288 149 15 chr17 22680585 22680631 -66823922 + L1ME3 LINE L1 6121 6159 -3 876 283 127 36 chr17 22681075 22681889 -66822664 + L1MD1 LINE L1 5446 5996 -246 2583 175 52 25 chr17 22681129 22681488 -66823065 + L1MB3 LINE L1 5534 5915 -268 2439 107 0 0 chr17 22681488 22681798 -66822755 + AluSx SINE Alu 1 310 -2 2583 175 52 25 chr17 22681798 22681999 -66822554 + L1MB3 LINE L1 5915 6109 -74 1169 258 102 17 chr17 22681999 22682352 -66822201 - MLT1G3 LTR MaLR -212 383 1 196 323 94 0 chr17 22682361 22682457 -66822096 - L2 LINE L2 -36 3236 3132 2282 97 3 3 chr17 22682496 22682796 -66821757 - AluSx SINE Alu -12 300 1 686 286 68 5 chr17 22682827 22683033 -66821520 - MIR SINE MIR -30 232 14 489 332 45 9 chr17 22683429 22683649 -66820904 + MIR SINE MIR 20 247 -15 398 305 108 15 chr17 22683670 22683873 -66820680 - L3 LINE CR1 -471 1106 885 218 330 70 26 chr17 22684497 22684612 -66819941 - MIR SINE MIR -44 218 99 993 144 52 0 chr17 22684645 22684839 -66819714 + L1MB3 LINE L1 5979 6182 -1 380 243 27 74 chr17 22685049 22685137 -66819416 + MER113 DNA MER1_type? 233 324 -197 928 205 0 6 chr17 22685137 22685308 -66819245 + FAM SINE Alu 2 171 -4 2143 112 39 0 chr17 22685311 22685596 -66818957 + AluSg SINE Alu 1 296 -14 380 243 27 74 chr17 22685596 22685651 -66818902 + MER113 DNA MER1_type? 326 373 -148 230 0 0 32 chr17 22685659 22685690 -66818863 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 769 130 0 0 chr17 22685694 22685809 -66818744 - FLAM_C SINE Alu -18 115 1 429 202 53 0 chr17 22685810 22685904 -66818649 + MER113 DNA MER1_type? 361 459 -62 399 316 71 0 chr17 22686343 22686498 -66818055 + Charlie8 DNA MER1_type 1 166 -2251 2051 116 11 0 chr17 22686506 22686812 -66817741 + AluSq SINE Alu 9 317 0 22 35 0 0 chr17 22686830 22686859 -66817694 + AT_rich Low_complexity Low_complexity 1 29 0 2206 106 3 10 chr17 22686915 22687218 -66817335 - AluSq SINE Alu -12 301 1 772 202 35 6 chr17 22687778 22687951 -66816602 + MER45A DNA AcHobo 1 178 0 339 266 65 65 chr17 22688386 22688540 -66816013 - MIR SINE MIR -5 257 104 822 273 206 5 chr17 22688544 22688951 -66815602 + L2 LINE L2 2053 2541 -773 2100 146 28 0 chr17 22688969 22689325 -66815228 - MER47A DNA MER2_type 0 366 1 401 137 0 0 chr17 22689358 22689431 -66815122 + L1M4 LINE L1 5128 5200 -946 2075 152 0 3 chr17 22689433 22689743 -66814810 + AluSx SINE Alu 1 309 -3 565 283 108 18 chr17 22689743 22690029 -66814524 - L2 LINE L2 -855 2459 2148 195 42 0 0 chr17 22690095 22690119 -66814434 + (TCTCC)n Simple_repeat Simple_repeat 2 25 0 1825 178 10 0 chr17 22690119 22690484 -66814069 - AluJb SINE Alu -4 400 7 188 268 37 0 chr17 22690569 22690651 -66813902 - L2 LINE L2 -1189 2125 2041 231 36 0 0 chr17 22691267 22691295 -66813258 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1660 158 7 58 chr17 22691300 22691592 -66812961 - AluSx SINE Alu -35 277 1 189 121 0 0 chr17 22693465 22693498 -66811055 + (CAT)n Simple_repeat Simple_repeat 2 34 0 190 225 25 0 chr17 22695038 22695118 -66809435 + (CTTA)n Simple_repeat Simple_repeat 2 83 0 383 95 0 0 chr17 22696902 22696965 -66807588 - L1MD1 LINE L1 -8 6234 6172 930 170 12 6 chr17 22696965 22697130 -66807423 + FRAM SINE Alu 1 166 0 1352 171 101 0 chr17 22697154 22697440 -66807113 + Tigger1 DNA MER2_type 1 315 -2103 611 138 0 0 chr17 22697441 22697535 -66807018 - AluJb SINE Alu -13 299 206 6190 133 21 4 chr17 22697537 22698542 -66806011 + Tigger1 DNA MER2_type 1006 2027 -391 2088 131 6 3 chr17 22698821 22699133 -66805420 - AluSq SINE Alu 0 313 1 1918 127 3 11 chr17 22699328 22699612 -66804941 + AluSx SINE Alu 1 282 -30 2588 37 3 3 chr17 22699614 22699910 -66804643 - AluY SINE Alu -15 296 1 2095 116 6 35 chr17 22699956 22700095 -66804458 + AluSx SINE Alu 1 142 -170 2396 75 13 0 chr17 22700095 22700402 -66804151 + AluY SINE Alu 1 311 0 2095 116 6 35 chr17 22700402 22700581 -66803972 + AluSx SINE Alu 142 310 -2 217 333 16 0 chr17 22700742 22700805 -66803748 + MIR SINE MIR 14 77 -185 185 221 145 99 chr17 22700808 22700939 -66803614 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22702008 22702036 -66802517 + AT_rich Low_complexity Low_complexity 1 28 0 196 229 145 99 chr17 22702335 22702466 -66802087 - MIR SINE MIR -82 180 44 192 250 23 0 chr17 22702469 22702513 -66802040 - MIR SINE MIR -185 77 33 326 261 126 8 chr17 22703085 22703204 -66801349 + MIR SINE MIR 7 139 -123 507 264 150 66 chr17 22703217 22703583 -66800970 - L2 LINE L2 -20 3252 2857 508 298 53 27 chr17 22703841 22703991 -66800562 + MIR3 SINE MIR 33 185 -42 393 272 31 63 chr17 22705485 22705676 -66798877 + MIR SINE MIR 28 212 -50 4719 263 100 38 chr17 22707400 22707690 -66796863 + HAL1 LINE L1 64 335 -2172 2319 80 0 3 chr17 22707690 22707991 -66796562 + AluY SINE Alu 1 300 -11 4719 263 100 38 chr17 22707991 22708660 -66795893 + HAL1 LINE L1 335 962 -1545 1877 166 0 0 chr17 22708660 22708956 -66795597 - AluJb SINE Alu -16 296 1 4719 263 100 38 chr17 22708956 22710182 -66794371 + HAL1 LINE L1 962 2384 -123 3648 59 0 0 chr17 22710247 22710691 -66793862 + L1PA6 LINE L1 5711 6154 0 2261 84 0 10 chr17 22710696 22710992 -66793561 + AluY SINE Alu 1 293 -18 27 0 0 0 chr17 22711018 22711045 -66793508 + AT_rich Low_complexity Low_complexity 1 27 0 450 298 13 20 chr17 22711634 22711806 -66792747 + MIR SINE MIR 3 174 -88 320 276 118 7 chr17 22715493 22715645 -66788908 + MIR3 SINE MIR 33 201 -7 396 268 39 0 chr17 22715724 22715851 -66788702 + MIR SINE MIR 20 151 -111 213 349 73 0 chr17 22716370 22716479 -66788074 - MIR SINE MIR -95 167 51 291 208 38 85 chr17 22716551 22716657 -66787896 - MIR SINE MIR -64 144 44 5650 128 26 25 chr17 22717091 22718028 -66786525 - LTR5 LTR ERVK 0 969 32 436 258 65 0 chr17 22719441 22719565 -66784988 + MIR SINE MIR 88 219 -43 301 274 108 38 chr17 22719590 22719776 -66784777 - L2 LINE L2 -12 3301 3103 182 326 22 56 chr17 22721213 22721302 -66783251 + MIR SINE MIR 61 146 -62 224 250 48 77 chr17 22722586 22722690 -66781863 - MIR SINE MIR -60 148 48 277 314 43 31 chr17 22730948 22731206 -66773347 + L2 LINE L2 2498 2758 -556 294 303 110 0 chr17 22732420 22732529 -66772024 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 22732860 22732884 -66771669 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 347 309 88 0 chr17 22733492 22733628 -66770925 + MIR SINE MIR 81 228 -34 2135 160 35 2 chr17 22734590 22734990 -66769563 + L1PB4 LINE L1 5539 5951 -205 1405 43 0 134 chr17 22734990 22735222 -66769331 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 22735289 22735364 -66769189 - MIR SINE MIR -133 129 56 510 294 76 0 chr17 22735414 22735598 -66768955 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 22735625 22735705 -66768848 - MER3 DNA MER1_type -5 204 125 2354 77 3 3 chr17 22735706 22736016 -66768537 + AluY SINE Alu 1 310 -1 216 333 16 0 chr17 22736113 22736176 -66768377 + MIR SINE MIR 14 77 -185 223 221 145 99 chr17 22736179 22736310 -66768243 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22736609 22736637 -66767916 + AT_rich Low_complexity Low_complexity 1 28 0 183 214 145 99 chr17 22737707 22737838 -66766715 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 22737841 22737904 -66766649 - MIR SINE MIR -185 77 14 2004 142 3 0 chr17 22738059 22738370 -66766183 - AluSx SINE Alu 0 312 1 1739 218 30 28 chr17 22738370 22738434 -66766119 - MLT1C-int LTR MaLR -752 619 557 1499 167 37 27 chr17 22738434 22738728 -66765825 - AluSx SINE Alu -15 297 1 1739 218 30 28 chr17 22738728 22739098 -66765455 - MLT1C-int LTR MaLR -814 557 184 1965 145 10 0 chr17 22739347 22739650 -66764903 + AluSq SINE Alu 1 306 -7 232 359 33 0 chr17 22739782 22739874 -66764679 + L2 LINE L2 3192 3286 -27 1205 241 87 34 chr17 22740510 22740946 -66763607 - MLT1C LTR MaLR 0 467 9 2082 63 4 7 chr17 22741371 22741668 -66762885 + AluY SINE Alu 17 312 0 2154 92 3 0 chr17 22742116 22742411 -66762142 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 22742430 22742588 -66761965 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 22742644 22742695 -66761858 + (CGG)n Simple_repeat Simple_repeat 2 52 0 243 365 14 7 chr17 22743066 22743214 -66761339 + G-rich Low_complexity Low_complexity 2 150 0 296 285 38 13 chr17 22743239 22743495 -66761058 + GA-rich Low_complexity Low_complexity 1 262 0 450 309 11 28 chr17 22743743 22743924 -66760629 + G-rich Low_complexity Low_complexity 3 180 0 402 317 0 38 chr17 22743976 22744162 -66760391 + G-rich Low_complexity Low_complexity 2 180 0 805 203 6 0 chr17 22745120 22745278 -66759275 + AluJb SINE Alu 1 159 -153 2155 76 45 0 chr17 22746939 22747227 -66757326 - AluY SINE Alu -10 301 1 402 68 17 0 chr17 22748290 22748349 -66756204 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 22748802 22749101 -66755452 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 22749121 22749145 -66755408 + AT_rich Low_complexity Low_complexity 1 24 0 383 327 45 71 chr17 22749594 22749831 -66754722 + HAL1 LINE L1 904 1135 -1372 1848 89 4 0 chr17 22749831 22750079 -66754474 + AluY SINE Alu 1 249 -62 383 327 45 71 chr17 22750079 22750107 -66754446 + HAL1 LINE L1 1135 1162 -1345 219 381 77 5 chr17 22750115 22750309 -66754244 + L2 LINE L2 2542 2749 -565 3471 112 27 24 chr17 22750323 22751072 -66753481 - L1PA13 LINE L1 0 6154 5384 411 273 13 67 chr17 22751332 22751564 -66752989 + LTR41 LTR ERVL 469 712 -61 935 83 91 224 chr17 22751564 22751650 -66752903 - MER30 DNA MER1_type -1 229 133 1879 130 7 13 chr17 22751650 22751949 -66752604 + AluSx SINE Alu 1 297 -15 1981 115 27 14 chr17 22751951 22752246 -66752307 + AluSc SINE Alu 1 299 -10 935 83 91 224 chr17 22752246 22752420 -66752133 - MER30 DNA MER1_type -98 132 1 411 273 13 67 chr17 22752420 22752511 -66752042 + LTR41 LTR ERVL 712 761 -12 230 335 185 28 chr17 22752522 22752980 -66751573 + L2 LINE L2 2787 3312 -1 520 293 60 24 chr17 22753034 22753283 -66751270 + MIR SINE MIR 2 259 -3 1261 306 35 16 chr17 22757260 22757926 -66746627 - L1MC3 LINE L1 -1629 6156 5479 230 349 28 46 chr17 22762650 22762759 -66741794 + MIR SINE MIR 82 188 -74 1321 176 111 29 chr17 22763153 22763494 -66741059 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 22764042 22764067 -66740486 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 204 163 0 0 chr17 22764554 22764597 -66739956 + C-rich Low_complexity Low_complexity 4 46 0 246 273 0 34 chr17 22764896 22764984 -66739569 + GA-rich Low_complexity Low_complexity 6 90 0 636 292 36 24 chr17 22765039 22765289 -66739264 + MER89-int LTR ERV1 1407 1659 -5142 269 266 93 29 chr17 22766713 22766852 -66737701 + L1MEc LINE L1 1910 2057 -4339 291 54 0 0 chr17 22766880 22766917 -66737636 + (TA)n Simple_repeat Simple_repeat 2 38 0 1531 189 3 14 chr17 22766932 22767217 -66737336 - AluJb SINE Alu -30 282 1 904 241 13 47 chr17 22767272 22767504 -66737049 + MER58A DNA MER1_type 1 224 0 428 278 95 18 chr17 22767506 22767675 -66736878 - L2 LINE L2 -653 2661 2480 2383 73 0 16 chr17 22767746 22768061 -66736492 + AluY SINE Alu 1 310 -1 1805 157 29 76 chr17 22768523 22768932 -66735621 + MLT1B LTR MaLR 1 390 0 296 209 12 31 chr17 22769862 22770025 -66734528 + CT-rich Low_complexity Low_complexity 2 161 0 1912 144 0 13 chr17 22770197 22770495 -66734058 - AluJb SINE Alu -16 296 3 1630 133 133 15 chr17 22770496 22770760 -66733793 - AluJo SINE Alu -7 295 1 382 241 76 21 chr17 22770761 22770906 -66733647 - MER106A DNA MER1_type -79 157 5 2125 107 0 0 chr17 22770957 22771247 -66733306 - AluSx SINE Alu -15 297 8 238 211 13 40 chr17 22771484 22771560 -66732993 + (CCCCG)n Simple_repeat Simple_repeat 1 74 0 253 239 87 76 chr17 22772888 22773072 -66731481 + L2 LINE L2 2870 3055 -217 856 283 36 12 chr17 22774935 22775182 -66729371 + MIR SINE MIR 9 261 -1 515 283 51 0 chr17 22775169 22775307 -66729246 + L2 LINE L2 3169 3313 0 * 1860 151 0 13 chr17 22775851 22776149 -66728404 - AluJb SINE Alu -16 296 3 1429 150 135 22 chr17 22776150 22776417 -66728136 - AluJo SINE Alu -15 297 1 2255 97 0 0 chr17 22777699 22777997 -66726556 - AluSx SINE Alu -14 298 1 2298 103 0 0 chr17 22778939 22779249 -66725304 - AluSx SINE Alu -2 310 1 1263 170 6 45 chr17 22779328 22779643 -66724910 + MLT1D LTR MaLR 218 505 0 1847 107 38 0 chr17 22779911 22780172 -66724381 - AluSx SINE Alu -9 303 33 1021 76 8 0 chr17 22780172 22780303 -66724250 - AluSq/x SINE Alu -180 132 1 1442 202 4 4 chr17 22780322 22780579 -66723974 + AluJo SINE Alu 43 299 -13 1728 231 28 11 chr17 22780588 22781021 -66723532 - MLT1D LTR MaLR -53 452 13 225 108 27 0 chr17 22781023 22781060 -66723493 - MLT1D LTR MaLR -467 38 1 2576 58 0 0 chr17 22781117 22781428 -66723125 - AluY SINE Alu 0 311 1 963 118 0 7 chr17 22781428 22781564 -66722989 - AluSq/x SINE Alu -177 135 1 1849 136 25 0 chr17 22781564 22781850 -66722703 - AluSq SINE Alu -9 304 12 2087 132 3 0 chr17 22781870 22782166 -66722387 - AluSq SINE Alu -10 303 7 251 284 93 38 chr17 22782182 22782365 -66722188 + MLT1K LTR MaLR 349 541 -47 728 297 52 0 chr17 22782389 22782621 -66721932 - MIR SINE MIR -11 251 8 556 274 18 50 chr17 22782630 22782695 -66721858 - LTR16C LTR ERVL -10 481 415 2151 120 10 0 chr17 22782695 22782996 -66721557 - AluSx SINE Alu 0 312 9 556 274 18 50 chr17 22782996 22783149 -66721404 - LTR16C LTR ERVL -76 415 270 670 222 149 0 chr17 22783368 22783562 -66720991 - MLT1G3 LTR MaLR -230 300 78 257 204 0 20 chr17 22783562 22783611 -66720942 + polypyrimidine Low_complexity Low_complexity 1 48 0 2193 129 0 0 chr17 22783611 22783920 -66720633 - AluSg SINE Alu -1 309 1 501 206 28 0 chr17 22783921 22784062 -66720491 + CT-rich Low_complexity Low_complexity 2 146 0 610 196 22 73 chr17 22784080 22784259 -66720294 + L1 LINE L1 4821 4990 -1156 1666 180 27 13 chr17 22784280 22784580 -66719973 - AluJb SINE Alu -8 304 1 2145 126 0 7 chr17 22784592 22784902 -66719651 - AluSx SINE Alu 0 312 5 326 235 17 59 chr17 22785003 22785122 -66719431 + MLT1J LTR MaLR 388 501 -10 2122 78 7 11 chr17 22785359 22785665 -66718888 + AluSg SINE Alu 1 305 0 818 150 7 43 chr17 22785875 22786015 -66718538 + AluJo SINE Alu 1 135 -177 1809 176 3 22 chr17 22786015 22786328 -66718225 + AluJo SINE Alu 1 307 -5 812 246 55 123 chr17 22786353 22786501 -66718052 + L1MEc LINE L1 2152 2309 -3906 2358 91 0 0 chr17 22786501 22786810 -66717743 + AluY SINE Alu 1 309 -2 812 246 55 123 chr17 22786810 22787020 -66717533 + L1MEc LINE L1 2309 2402 -3813 1820 143 14 0 chr17 22787020 22787300 -66717253 + AluSx SINE Alu 29 312 0 812 246 55 123 chr17 22787300 22787625 -66716928 + L1MEc LINE L1 2402 2748 -3467 794 197 0 7 chr17 22787662 22787804 -66716749 - AluJo SINE Alu -52 260 120 812 150 14 43 chr17 22787847 22787987 -66716566 - AluJo SINE Alu -176 136 1 2381 85 0 0 chr17 22788005 22788310 -66716243 + AluSc SINE Alu 1 305 -4 1878 125 12 60 chr17 22788324 22788643 -66715910 + AluSx SINE Alu 1 304 -8 385 270 133 0 chr17 22788649 22788778 -66715775 + L1MC/D LINE L1 5488 5634 -522 2111 132 0 0 chr17 22788798 22789094 -66715459 + AluSx SINE Alu 1 296 -16 2024 126 0 40 chr17 22789096 22789241 -66715312 + AluSx SINE Alu 1 150 -162 2337 73 3 0 chr17 22789241 22789544 -66715009 + AluY SINE Alu 1 304 -7 2024 126 0 40 chr17 22789544 22789723 -66714830 + AluSx SINE Alu 150 312 0 2159 101 0 10 chr17 22789745 22789880 -66714673 + AluSx SINE Alu 1 136 -176 2274 88 0 0 chr17 22789880 22790176 -66714377 + AluY SINE Alu 1 296 -15 2159 101 0 10 chr17 22790176 22790338 -66714215 + AluSx SINE Alu 136 295 -17 1847 149 16 13 chr17 22790341 22790650 -66713903 - AluJb SINE Alu 0 312 3 690 124 0 0 chr17 22790797 22790902 -66713651 - AluSg/x SINE Alu -3 307 203 318 109 0 0 chr17 22790929 22790984 -66713569 + Alu SINE Alu 248 302 0 367 332 137 34 chr17 22791842 22792047 -66712506 - MIR SINE MIR -19 243 18 2221 114 0 9 chr17 22792321 22792636 -66711917 + AluSx SINE Alu 1 312 0 263 265 217 0 chr17 22792757 22792840 -66711713 + MIR SINE MIR 52 152 -110 1602 164 13 7 chr17 22793139 22793438 -66711115 - AluY SINE Alu -10 301 1 2209 106 0 13 chr17 22793441 22793616 -66710937 - AluSx SINE Alu -5 307 136 2080 112 23 3 chr17 22793616 22793921 -66710632 - AluSx SINE Alu -1 311 1 2209 106 0 13 chr17 22793921 22794056 -66710497 - AluSx SINE Alu -176 136 1 318 204 11 11 chr17 22794059 22794147 -66710406 - FLAM_A SINE Alu 0 133 46 270 233 159 91 chr17 22794155 22794331 -66710222 + L2 LINE L2 2886 3073 -240 1857 156 0 9 chr17 22794354 22794669 -66709884 - AluJb SINE Alu 0 312 1 2149 113 0 3 chr17 22794676 22794978 -66709575 - AluSx SINE Alu -11 301 1 2078 133 0 0 chr17 22794984 22795278 -66709275 - AluSc SINE Alu -15 294 1 1589 157 88 7 chr17 22795278 22795552 -66709001 - AluSx SINE Alu -16 296 1 778 193 7 0 chr17 22795552 22795687 -66708866 - AluJb SINE Alu -176 136 1 1958 113 57 0 chr17 22795688 22795970 -66708583 - AluSg SINE Alu -12 298 1 1857 154 0 4 chr17 22796044 22796324 -66708229 - AluJb SINE Alu -33 279 1 2129 103 7 0 chr17 22796443 22796734 -66707819 - AluSc SINE Alu -16 293 1 1873 73 114 15 chr17 22796750 22797023 -66707530 + AluY SINE Alu 1 300 -11 599 160 328 0 chr17 22797033 22797164 -66707389 - AluJo SINE Alu -138 174 1 2223 107 0 3 chr17 22797577 22797886 -66706667 - AluSc SINE Alu -1 308 1 1998 107 38 3 chr17 22798253 22798542 -66706011 + AluSx SINE Alu 1 299 -13 1788 117 53 0 chr17 22798548 22798845 -66705708 + AluY SINE Alu 5 315 0 1259 113 0 5 chr17 22799316 22799495 -66705058 - AluSq SINE Alu -1 312 134 2494 59 0 3 chr17 22799495 22799798 -66704755 - AluY SINE Alu -9 302 1 2405 65 0 37 chr17 22799805 22800128 -66704425 - AluY SINE Alu 0 311 1 2176 102 0 13 chr17 22800271 22800440 -66704113 - AluSq SINE Alu -12 301 136 2387 71 3 7 chr17 22800440 22800750 -66703803 - AluSp SINE Alu -4 309 1 2176 102 0 13 chr17 22800750 22800885 -66703668 - AluSq SINE Alu -177 136 1 216 123 18 35 chr17 22801956 22802013 -66702540 + CT-rich Low_complexity Low_complexity 1 56 0 1677 160 33 26 chr17 22802042 22802348 -66702205 - AluJb SINE Alu -4 308 1 2374 50 7 3 chr17 22802440 22802738 -66701815 + AluY SINE Alu 1 299 -12 1647 175 7 17 chr17 22802741 22803038 -66701515 + AluJo SINE Alu 1 294 -18 2062 100 0 55 chr17 22803098 22803409 -66701144 - AluSc SINE Alu -15 294 1 2246 83 6 19 chr17 22803440 22803752 -66700801 + AluY SINE Alu 1 308 -3 25 31 0 0 chr17 22803772 22803804 -66700749 + AT_rich Low_complexity Low_complexity 1 32 0 2368 87 0 0 chr17 22803853 22804154 -66700399 + AluSx SINE Alu 15 301 -11 1600 188 33 0 chr17 22804251 22804522 -66700031 - AluJo SINE Alu -32 280 1 249 0 31 0 chr17 22804522 22804554 -66699999 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2485 39 0 11 chr17 22804554 22804839 -66699714 - AluY SINE Alu -29 282 1 2355 108 3 0 chr17 22804841 22805147 -66699406 - AluSp SINE Alu -6 307 1 1579 213 3 3 chr17 22805154 22805441 -66699112 - AluJo SINE Alu -17 295 9 2387 76 0 0 chr17 22805457 22805748 -66698805 - AluSx SINE Alu -21 291 1 767 134 7 42 chr17 22805748 22805890 -66698663 - L1MB2 LINE L1 -220 5951 5815 1861 148 43 13 chr17 22805890 22806193 -66698360 - AluJo SINE Alu 0 312 1 2387 79 3 10 chr17 22806666 22806970 -66697583 + AluSp SINE Alu 1 302 -11 1675 184 29 9 chr17 22807934 22808276 -66696277 + MER47A DNA MER2_type 18 366 0 485 260 92 23 chr17 22808730 22808903 -66695650 - Zaphod DNA AcHobo -2146 1885 1701 2126 137 0 3 chr17 22808903 22809210 -66695343 + AluSq SINE Alu 1 306 -7 1053 87 0 0 chr17 22809210 22809337 -66695216 + AluSg SINE Alu 1 127 -183 2211 110 3 0 chr17 22809338 22809628 -66694925 + AluSx SINE Alu 11 301 -11 198 0 0 0 chr17 22810286 22810308 -66694245 + (T)n Simple_repeat Simple_repeat 1 22 0 785 152 0 8 chr17 22810367 22810499 -66694054 - FLAM_C SINE Alu 0 133 3 2134 135 0 0 chr17 22810945 22811248 -66693305 - AluJb SINE Alu -9 303 1 2260 121 3 0 chr17 22811254 22811559 -66692994 - AluSq SINE Alu -7 306 1 2188 144 30 62 chr17 22811672 22811907 -66692646 - L1MA7 LINE L1 0 6291 6050 198 0 0 0 chr17 22811907 22811929 -66692624 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2363 104 0 0 chr17 22811932 22812231 -66692322 - AluSx SINE Alu -12 300 2 2188 144 30 62 chr17 22812231 22812272 -66692281 - L1MA7 LINE L1 -243 6048 6007 2099 122 10 0 chr17 22812272 22812560 -66691993 + AluJb SINE Alu 1 291 -21 2188 144 30 62 chr17 22812560 22812860 -66691693 - L1MA7 LINE L1 -284 6007 5621 402 310 111 18 chr17 22812863 22813089 -66691464 - L1M4 LINE L1 -1155 4991 4745 359 271 85 20 chr17 22813167 22813211 -66691342 - L1M4 LINE L1 -1768 4378 4338 2538 70 0 25 chr17 22813211 22813527 -66691026 - AluY SINE Alu -3 308 1 359 271 85 20 chr17 22813527 22813752 -66690801 - L1M4 LINE L1 -1808 4338 4072 2467 92 0 0 chr17 22815026 22815332 -66689221 + AluY SINE Alu 1 306 -5 10780 39 15 105 chr17 22815819 22817342 -66687211 - SVA Other Other 0 1386 1 846 226 34 34 chr17 22817583 22817817 -66686736 + MIR SINE MIR 28 261 -1 1760 159 0 4 chr17 22817929 22818200 -66686353 - AluJb SINE Alu -19 293 24 2161 128 3 3 chr17 22818205 22818502 -66686051 - AluSq SINE Alu -16 297 1 2551 79 0 0 chr17 22818586 22818889 -66685664 - AluSg SINE Alu -7 303 1 191 312 91 0 chr17 22820194 22820271 -66684282 - L3 LINE CR1 -453 1124 1041 1910 144 0 50 chr17 22820497 22820644 -66683909 + AluJb SINE Alu 1 125 -187 2294 95 0 10 chr17 22820644 22820939 -66683614 + AluSx SINE Alu 1 292 -20 1910 144 0 50 chr17 22820939 22821110 -66683443 + AluJb SINE Alu 125 303 -9 2257 120 3 13 chr17 22821117 22821433 -66683120 + AluSq SINE Alu 1 313 0 257 262 71 50 chr17 22822257 22822398 -66682155 + MER91B DNA MER1_type 42 185 -5 1759 98 29 138 chr17 22822734 22823112 -66681441 + MER1B DNA MER1_type 1 337 0 353 290 91 45 chr17 22823375 22823551 -66681002 - MIR SINE MIR -33 229 46 2282 116 0 0 chr17 22824450 22824744 -66679809 + AluSx SINE Alu 1 294 -18 1832 127 81 3 chr17 22824747 22825030 -66679523 + AluSc SINE Alu 1 305 -4 2390 71 3 10 chr17 22828811 22829108 -66675445 - AluSq SINE Alu -18 295 1 2458 95 0 0 chr17 22832575 22832879 -66671674 + AluY SINE Alu 1 304 -7 370 190 134 145 chr17 22832955 22833040 -66671513 + MIR SINE MIR 65 149 -113 1740 172 29 0 chr17 22833040 22833319 -66671234 - AluJo SINE Alu -16 296 10 370 190 134 145 chr17 22833319 22833412 -66671141 + MIR SINE MIR 149 241 -21 199 344 62 31 chr17 22833780 22833940 -66670613 - L2 LINE L2 -8 3264 3100 281 227 52 31 chr17 22834672 22834769 -66669784 - MIR SINE MIR -126 136 38 1822 154 42 0 chr17 22834892 22835177 -66669376 + AluSg SINE Alu 14 310 0 254 308 0 13 chr17 22836104 22836182 -66668371 + MER5B DNA MER1_type 64 140 -38 2380 104 0 0 chr17 22836182 22836490 -66668063 + AluSq SINE Alu 1 308 -5 386 256 44 29 chr17 22836528 22836665 -66667888 - MIR3 SINE MIR -33 175 37 184 264 19 0 chr17 22840394 22840447 -66664106 + L2 LINE L2 2586 2639 -675 2203 109 26 3 chr17 22841747 22842051 -66662502 - AluSq SINE Alu -2 311 1 382 283 68 61 chr17 22843005 22843284 -66661269 + L2 LINE L2 3017 3297 -16 2120 127 0 0 chr17 22843292 22843583 -66660970 + AluSx SINE Alu 1 291 -21 2520 81 0 0 chr17 22843586 22843884 -66660669 + AluY SINE Alu 1 298 -13 3560 172 32 59 chr17 22844100 22844432 -66660121 - L1MB5 LINE L1 -13 6161 5821 2308 107 0 10 chr17 22844432 22844741 -66659812 - AluSg SINE Alu -4 306 1 3560 172 32 59 chr17 22844741 22844877 -66659676 - L1MB5 LINE L1 -353 5821 5683 2580 60 0 3 chr17 22844877 22845179 -66659374 + AluY SINE Alu 2 302 -9 3560 172 32 59 chr17 22845179 22845219 -66659334 - L1MB5 LINE L1 -491 5683 5643 1991 114 7 4 chr17 22845219 22845491 -66659062 - AluSx SINE Alu -5 307 35 3560 172 32 59 chr17 22845491 22845822 -66658731 - L1MB5 LINE L1 -531 5643 5343 265 266 0 0 chr17 22845819 22845883 -66658670 - L1MB5 LINE L1 -1025 5121 5058 * 2318 103 0 28 chr17 22846635 22846954 -66657599 - AluSx SINE Alu 0 312 3 1770 155 28 3 chr17 22846954 22847245 -66657308 - AluSx SINE Alu -9 303 6 2238 106 0 0 chr17 22847251 22847567 -66656986 - AluY SINE Alu 0 317 2 1558 170 24 34 chr17 22848219 22848513 -66656040 + AluJb SINE Alu 1 291 -21 2175 127 3 0 chr17 22848644 22848965 -66655588 - AluSq SINE Alu 0 313 1 2433 64 0 0 chr17 22849018 22849328 -66655225 - AluY SINE Alu 0 310 1 207 182 0 0 chr17 22849371 22849404 -66655149 + (CGTG)n Simple_repeat Simple_repeat 1 33 0 334 346 25 31 chr17 22849881 22850043 -66654510 + MIR SINE MIR 59 219 -43 180 0 0 0 chr17 22850116 22850136 -66654417 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2325 96 7 0 chr17 22850616 22850907 -66653646 + AluSx SINE Alu 1 293 -19 3888 176 46 54 chr17 22850940 22851917 -66652636 - LTR5 LTR ERVK 0 969 1 191 284 91 34 chr17 22853294 22853382 -66651171 - MIR3 SINE MIR -11 197 105 195 221 63 63 chr17 22853568 22853663 -66650890 - MIR3 SINE MIR -106 102 8 354 265 130 25 chr17 22853822 22853984 -66650569 - MIR SINE MIR -21 241 63 1317 188 9 0 chr17 22854110 22854333 -66650220 + AluJb SINE Alu 84 308 -4 2222 124 7 0 chr17 22854458 22854764 -66649789 - AluSc SINE Alu 0 309 2 442 125 0 0 chr17 22854839 22854903 -66649650 + FLAM SINE Alu 54 117 -26 1199 192 0 22 chr17 22855508 22855737 -66648816 - AluJo SINE Alu -88 224 1 23 0 0 0 chr17 22855750 22855773 -66648780 + AT_rich Low_complexity Low_complexity 1 23 0 7019 55 22 42 chr17 22855810 22857459 -66647094 - SVA Other Other -723 1386 5 2089 93 4 0 chr17 22857459 22857737 -66646816 - AluSp SINE Alu -34 279 1 2159 89 0 0 chr17 22858276 22858581 -66645972 - AluSc SINE Alu 0 305 1 180 269 0 90 chr17 22858734 22858812 -66645741 + MER5A DNA MER1_type 3 73 -116 2266 71 3 3 chr17 22858815 22859110 -66645443 + AluY SINE Alu 1 295 -16 2020 103 17 0 chr17 22859122 22859413 -66645140 + AluSq SINE Alu 1 296 -17 2037 104 21 0 chr17 22859433 22859720 -66644833 + AluSx SINE Alu 1 293 -19 696 157 0 0 chr17 22859732 22859834 -66644719 + FLAM_C SINE Alu 2 103 -40 186 318 0 0 chr17 22859868 22859912 -66644641 + MER5A DNA MER1_type 145 188 -1 2182 114 0 0 chr17 22860252 22860560 -66643993 + AluSc SINE Alu 1 308 -1 492 205 86 0 chr17 22860838 22860955 -66643598 + MER33 DNA MER1_type 25 151 -173 2188 86 0 0 chr17 22860986 22861265 -66643288 + AluSg SINE Alu 2 280 -30 1599 191 7 3 chr17 22861293 22861597 -66642956 + AluJb SINE Alu 1 305 -7 300 183 0 33 chr17 22862846 22862868 -66641685 - L1ME4a LINE L1 -2 6119 6098 2055 120 3 0 chr17 22862868 22863159 -66641394 + AluSc SINE Alu 1 292 -17 300 183 0 33 chr17 22863159 22863196 -66641357 - L1ME4a LINE L1 -23 6098 6062 280 301 166 16 chr17 22863225 22863418 -66641135 - L1ME LINE L1 -314 5807 5586 471 244 195 32 chr17 22864341 22864562 -66639991 - MIR SINE MIR -5 257 1 234 244 191 9 chr17 22864670 22864785 -66639768 + Charlie8 DNA MER1_type 86 221 -2196 779 174 0 0 chr17 22865187 22865302 -66639251 + AluJo/FLAM SINE Alu 1 115 -187 445 139 0 15 chr17 22865303 22865556 -66638997 + AluSq SINE Alu 2 317 0 2107 106 0 7 chr17 22865565 22865857 -66638696 + AluSx SINE Alu 1 290 -22 292 188 130 0 chr17 22865875 22865944 -66638609 + AluSp SINE Alu 149 226 -77 35 33 0 17 chr17 22866400 22866438 -66638115 + AT_rich Low_complexity Low_complexity 1 39 -20 1883 134 31 0 chr17 22866438 22866728 -66637825 + AluSg SINE Alu 1 299 -11 35 33 0 17 chr17 22866728 22866749 -66637804 + AT_rich Low_complexity Low_complexity 39 59 0 405 175 126 10 chr17 22866749 22866852 -66637701 - L1MB8 LINE L1 -1 6177 6063 2074 102 6 19 chr17 22866853 22867167 -66637386 - AluSq SINE Alu -3 310 1 1171 178 87 73 chr17 22867177 22867326 -66637227 - AluJo SINE Alu -12 290 134 2078 116 26 0 chr17 22867326 22867628 -66636925 - AluSx SINE Alu -2 310 1 1171 178 87 73 chr17 22867628 22867764 -66636789 - AluJo SINE Alu -168 134 1 1656 106 0 0 chr17 22867796 22868022 -66636531 + AluSq SINE Alu 1 226 -87 1660 177 32 0 chr17 22868022 22868332 -66636221 - L1MB8 LINE L1 -430 5754 5435 1829 121 6 46 chr17 22868333 22868656 -66635897 - AluY SINE Alu -1 310 1 767 101 0 32 chr17 22868782 22868954 -66635599 + L1PBa LINE L1 1513 1778 -5085 897 111 7 0 chr17 22868954 22869089 -66635464 + L1PB2 LINE L1 6015 6150 -1 767 101 0 32 chr17 22869089 22869103 -66635450 + L1PBa LINE L1 1778 1791 -5072 580 259 42 19 chr17 22869101 22869364 -66635189 + L1M4 LINE L1 2780 3048 -3098 * 553 223 54 67 chr17 22869373 22869597 -66634956 + L1M4 LINE L1 454 674 -5868 459 249 61 69 chr17 22869583 22869929 -66634624 + L1M1 LINE L1 2932 3274 -4291 * 267 108 0 0 chr17 22869930 22869993 -66634560 - Alu SINE Alu 0 308 246 284 121 0 17 chr17 22870093 22870151 -66634402 + AluSp/q SINE Alu 243 299 -4 281 233 240 53 chr17 22870568 22870718 -66633835 + MIR SINE MIR 70 247 -15 2371 185 73 14 chr17 22872484 22873003 -66631550 + MER68 LTR ERV1 1 550 -12 1034 169 97 147 chr17 22873585 22873780 -66630773 + L1MC5 LINE L1 6732 6935 -1026 1629 183 6 6 chr17 22873780 22874092 -66630461 + AluJb SINE Alu 1 312 0 1034 169 97 147 chr17 22874092 22874380 -66630173 + L1MC5 LINE L1 6935 7191 -770 674 186 174 12 chr17 22874395 22874556 -66629997 - MER20 DNA MER1_type 0 219 33 750 179 201 22 chr17 22874573 22874605 -66629948 + L1MC5 LINE L1 7203 7228 -733 333 0 0 0 chr17 22874605 22874642 -66629911 + (CA)n Simple_repeat Simple_repeat 2 38 0 750 179 201 22 chr17 22874642 22874877 -66629676 + L1MC5 LINE L1 7228 7518 -443 21 36 0 0 chr17 22875430 22875458 -66629095 + AT_rich Low_complexity Low_complexity 1 28 0 218 275 122 76 chr17 22875761 22875892 -66628661 - MIR SINE MIR -82 180 44 218 349 16 0 chr17 22875895 22875958 -66628595 - MIR SINE MIR -185 77 14 2182 95 0 3 chr17 22876109 22876405 -66628148 - AluY SINE Alu -14 297 3 1486 160 46 0 chr17 22876409 22876672 -66627881 - AluSx SINE Alu -18 294 20 266 332 61 19 chr17 22876692 22876906 -66627647 + L2 LINE L2 1864 2086 -1228 247 256 26 0 chr17 22877132 22877210 -66627343 - L1MC4 LINE L1 -141 7901 7822 1739 140 46 0 chr17 22877214 22877499 -66627054 - AluSx SINE Alu -14 298 1 398 242 126 26 chr17 22877502 22877692 -66626861 - L1MC4 LINE L1 -724 7318 7110 2170 100 3 3 chr17 22877706 22878006 -66626547 - AluSc SINE Alu -9 300 1 2013 142 0 0 chr17 22878024 22878319 -66626234 - AluSg SINE Alu -15 295 1 610 140 10 0 chr17 22878328 22878428 -66626125 - AluJo/FRAM SINE Alu -9 303 203 1179 153 5 10 chr17 22878430 22878633 -66625920 - AluSx SINE Alu -78 234 33 1042 129 16 5 chr17 22878678 22878864 -66625689 - AluSg/x SINE Alu -4 305 118 614 278 32 28 chr17 22878980 22879264 -66625289 + L1M4 LINE L1 4195 4479 -1667 2289 74 0 0 chr17 22880070 22880368 -66624185 - AluY SINE Alu -12 299 2 1847 143 6 16 chr17 22880525 22880840 -66623713 + AluSx SINE Alu 1 312 0 1924 111 0 81 chr17 22880860 22881001 -66623552 + AluSx SINE Alu 1 152 -160 2319 68 3 3 chr17 22881001 22881312 -66623241 + AluY SINE Alu 1 311 0 1924 111 0 81 chr17 22881312 22881504 -66623049 + AluSx SINE Alu 152 307 -5 236 333 16 0 chr17 22881658 22881721 -66622832 + MIR SINE MIR 14 77 -185 226 229 145 99 chr17 22881724 22881855 -66622698 + MIR SINE MIR 44 180 -82 1920 134 0 0 chr17 22882430 22882714 -66621839 + AluSg SINE Alu 15 298 -12 2890 158 152 108 chr17 22882714 22882937 -66621616 - L1MC4 LINE L1 -57 7985 7773 1867 90 131 4 chr17 22882937 22883205 -66621348 - AluSx SINE Alu 0 302 1 2890 158 152 108 chr17 22883205 22883684 -66620869 - L1MC4 LINE L1 -269 7773 7227 2146 117 0 0 chr17 22883684 22883992 -66620561 - AluSx SINE Alu -4 308 1 2890 158 152 108 chr17 22883992 22884256 -66620297 - L1MC4 LINE L1 -815 7227 6976 2532 35 0 13 chr17 22884672 22884987 -66619566 - AluY SINE Alu 0 311 1 1967 121 10 22 chr17 22887028 22887342 -66617211 + AluSx SINE Alu 1 310 -2 1797 156 0 7 chr17 22887468 22887769 -66616784 - AluJb SINE Alu -9 303 5 2322 87 0 0 chr17 22888595 22888895 -66615658 - AluSq SINE Alu -13 300 1 1321 260 59 17 chr17 22889363 22889771 -66614782 + L1ME3A LINE L1 5631 6055 -115 26 0 0 0 chr17 22890134 22890160 -66614393 + AT_rich Low_complexity Low_complexity 1 26 0 2179 103 3 3 chr17 22890171 22890471 -66614082 + AluSp SINE Alu 1 300 -13 279 0 0 0 chr17 22890471 22890488 -66614065 + (CA)n Simple_repeat Simple_repeat 1 48 0 279 0 0 0 chr17 22890488 22890519 -66614034 + (CA)n Simple_repeat Simple_repeat 2 32 0 1847 134 44 7 chr17 22890959 22891257 -66613296 + AluJb SINE Alu 1 309 -3 327 312 63 63 chr17 22891543 22891613 -66612940 + MER5A DNA MER1_type 1 70 -119 2215 74 14 0 chr17 22891613 22891896 -66612657 + AluSp SINE Alu 16 302 -11 327 312 63 63 chr17 22891896 22892014 -66612539 + MER5A DNA MER1_type 69 189 0 199 306 111 14 chr17 22892120 22892192 -66612361 + MIR SINE MIR 24 102 -106 2118 108 3 19 chr17 22892218 22892532 -66612021 - AluSp SINE Alu -4 309 1 733 203 32 101 chr17 22892671 22892888 -66611665 + AluJo SINE Alu 105 306 -6 2505 133 5 5 chr17 22892892 22893284 -66611269 + L1PBa LINE L1 1012 1403 -5460 222 356 113 21 chr17 22894333 22894465 -66610088 - MIR SINE MIR -57 151 42 594 195 47 39 chr17 22894515 22894643 -66609910 + FLAM_A SINE Alu 1 129 -4 1997 111 0 3 chr17 22895060 22895348 -66609205 - AluSx SINE Alu -5 307 21 2061 116 10 0 chr17 22895387 22895689 -66608864 - AluSx SINE Alu -7 305 1 1216 169 0 5 chr17 22896146 22896347 -66608206 + AluJo SINE Alu 5 204 -108 1833 150 6 13 chr17 22896439 22896753 -66607800 - AluJb SINE Alu 0 312 1 2618 152 23 9 chr17 22896960 22897401 -66607152 - MLT1C LTR MaLR 0 467 21 2399 68 0 0 chr17 22897541 22897852 -66606701 + AluY SINE Alu 1 311 0 942 144 0 0 chr17 22897861 22898007 -66606546 + AluSc SINE Alu 145 290 -19 2459 44 3 0 chr17 22898007 22898301 -66606252 + AluY SINE Alu 1 295 -16 221 176 59 39 chr17 22898923 22898974 -66605579 - MER5A DNA MER1_type -137 52 1 374 286 18 0 chr17 22899973 22900085 -66604468 - L2 LINE L2 -5 3267 3154 493 308 153 31 chr17 22900368 22901055 -66603498 - L2 LINE L2 -231 3082 2317 3239 40 10 7 chr17 22901165 22901568 -66602985 + L1PA7 LINE L1 5751 6154 0 2305 73 3 0 chr17 22901616 22901918 -66602635 + AluY SINE Alu 1 303 -8 2445 50 3 0 chr17 22901927 22902227 -66602326 + AluY SINE Alu 1 301 -10 1007 262 34 17 chr17 22903076 22903370 -66601183 - MER89-int LTR ERV1 -5142 1659 1361 1613 207 54 6 chr17 22903379 22903712 -66600841 - MLT1A1 LTR MaLR -4 361 13 328 219 0 37 chr17 22903717 22903799 -66600754 - MER89-int LTR ERV1 -5438 1363 1285 268 356 15 0 chr17 22904921 22905056 -66599497 + (CA)n Simple_repeat Simple_repeat 1 137 0 2294 77 0 3 chr17 22908616 22908916 -66595637 + AluY SINE Alu 1 299 -12 1137 92 12 18 chr17 22908916 22909079 -66595474 + AluSc SINE Alu 132 293 -16 180 0 0 0 chr17 22909121 22909141 -66595412 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 624 130 74 0 chr17 22909147 22909255 -66595298 - AluSp/q SINE Alu -24 289 174 255 93 0 0 chr17 22909270 22909313 -66595240 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 1932 115 0 10 chr17 22909313 22909601 -66594952 - AluSq SINE Alu -28 285 1 440 120 15 158 chr17 22909917 22909977 -66594576 - L1MA8 LINE L1 -69 6222 6190 1957 116 41 0 chr17 22909977 22910269 -66594284 - AluSg SINE Alu -6 304 1 440 120 15 158 chr17 22910269 22910341 -66594212 - L1MA8 LINE L1 -101 6190 6109 2310 78 0 0 chr17 22910348 22910643 -66593910 - AluY SINE Alu -16 295 1 261 0 0 0 chr17 22910904 22910933 -66593620 + (CA)n Simple_repeat Simple_repeat 2 30 0 41 21 0 0 chr17 22911032 22911080 -66593473 + GC_rich Low_complexity Low_complexity 1 48 0 22 70 0 0 chr17 22911135 22911178 -66593375 + GC_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr17 22913056 22913077 -66591476 + AT_rich Low_complexity Low_complexity 1 21 0 295 47 0 0 chr17 22913524 22913567 -66590986 + AluY SINE Alu 258 300 -1 554 245 155 23 chr17 22916971 22917236 -66587317 - L1M4 LINE L1 -1200 4946 4647 460 284 7 0 chr17 22917261 22917402 -66587151 - L1M4 LINE L1 -3324 2822 2681 2473 53 0 0 chr17 22917964 22918265 -66586288 + AluY SINE Alu 1 301 -10 906 158 36 81 chr17 22918478 22918700 -66585853 + L1MA8 LINE L1 6055 6266 -25 1392 189 0 42 chr17 22918777 22919090 -66585463 - AluJb SINE Alu -12 300 1 2027 88 14 3 chr17 22919567 22919864 -66584689 - AluSc SINE Alu -9 300 1 20071 44 2 0 chr17 22920142 22923390 -66581163 - L1PA5 LINE L1 0 6154 2933 2295 100 0 0 chr17 22923809 22924119 -66580434 - AluSg SINE Alu 0 310 1 1827 102 12 65 chr17 22924138 22924461 -66580092 - AluY SINE Alu 0 311 6 222 91 0 0 chr17 22924907 22924940 -66579613 + (CTTTG)n Simple_repeat Simple_repeat 3 35 0 641 113 0 9 chr17 22924943 22925049 -66579504 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 1947 141 6 10 chr17 22925061 22925374 -66579179 - AluSx SINE Alu 0 312 1 2424 57 0 0 chr17 22925754 22926053 -66578500 - AluY SINE Alu -12 299 1 2180 107 0 3 chr17 22926053 22926353 -66578200 - AluY SINE Alu -12 299 1 244 308 15 0 chr17 22926472 22926537 -66578016 - L2 LINE L2 -20 3252 3187 2153 87 7 0 chr17 22927492 22927778 -66576775 - AluSc SINE Alu -21 288 1 1624 150 29 29 chr17 22928999 22929111 -66575442 + AluJo SINE Alu 1 112 -200 2668 130 34 0 chr17 22929111 22929525 -66575028 - MSTA LTR MaLR 0 428 1 1624 150 29 29 chr17 22929525 22929719 -66574834 + AluJo SINE Alu 111 307 -5 296 236 0 34 chr17 22932733 22932822 -66571731 + MIR SINE MIR 81 166 -96 261 0 0 0 chr17 22933356 22933385 -66571168 + (A)n Simple_repeat Simple_repeat 1 29 0 285 75 0 0 chr17 22934221 22934261 -66570292 + (A)n Simple_repeat Simple_repeat 1 40 0 1372 108 0 0 chr17 22935669 22935854 -66568699 + AluSq SINE Alu 1 185 -128 252 276 26 0 chr17 22936197 22936273 -66568280 - MER116 DNA Mariner -1 79 2 258 298 64 0 chr17 22936278 22936372 -66568181 - MIR3 SINE MIR -35 173 74 417 39 0 0 chr17 22936481 22936532 -66568021 + (CA)n Simple_repeat Simple_repeat 2 52 0 2214 102 0 0 chr17 22936550 22936843 -66567710 - AluSp SINE Alu -20 293 1 319 153 68 0 chr17 22937045 22937104 -66567449 - AluS SINE Alu -240 63 1 740 233 62 54 chr17 22937110 22937219 -66567334 + L1M4c LINE L1 2101 2208 -4174 2155 117 0 0 chr17 22937219 22937528 -66567025 + AluSg1 SINE Alu 1 309 0 740 233 62 54 chr17 22937528 22937847 -66566706 + L1M4c LINE L1 2208 2533 -3849 288 169 68 0 chr17 22937860 22937919 -66566634 + L1MA9 LINE L1 6250 6312 0 760 256 13 58 chr17 22937933 22938036 -66566517 + L1MA10 LINE L1 6023 6129 -205 2124 106 0 3 chr17 22938036 22938329 -66566224 + AluSc SINE Alu 1 292 -17 222 37 0 0 chr17 22938336 22938363 -66566190 + (CAAAA)n Simple_repeat Simple_repeat 5 31 0 760 256 13 58 chr17 22938363 22938563 -66565990 + L1MA10 LINE L1 6135 6320 -14 1799 225 81 35 chr17 22938573 22939430 -66565123 + L1MCa LINE L1 2316 3203 -3223 1219 71 0 30 chr17 22940277 22940445 -66564108 + L1PB1 LINE L1 5982 6144 -7 25 51 0 0 chr17 22940731 22940770 -66563783 + AT_rich Low_complexity Low_complexity 1 39 0 522 275 52 34 chr17 22942179 22942448 -66562105 + L1MCa LINE L1 4170 4443 -1983 906 206 20 10 chr17 22942464 22942668 -66561885 + L1PB4 LINE L1 4874 5079 -1067 * 2267 178 60 8 chr17 22942655 22943244 -66561309 + L1PB4 LINE L1 5514 6161 0 602 284 54 31 chr17 22944735 22945182 -66559371 - L1M4 LINE L1 -2249 3897 3441 1955 104 30 10 chr17 22945199 22945497 -66559056 - AluSg SINE Alu -3 307 4 865 108 8 8 chr17 22945499 22945628 -66558925 - AluSq/x SINE Alu -183 129 1 379 279 86 43 chr17 22945630 22945845 -66558708 - L1M4 LINE L1 -2721 3425 3221 2284 81 0 0 chr17 22945845 22946140 -66558413 - AluY SINE Alu -16 295 1 379 279 86 43 chr17 22946140 22946368 -66558185 - L1M4 LINE L1 -2925 3221 2963 312 289 139 54 chr17 22948000 22948353 -66556200 - L1M4 LINE L1 -1782 4364 3982 2071 99 3 3 chr17 22948355 22948647 -66555906 - AluSq SINE Alu -10 303 12 1141 63 7 0 chr17 22948647 22948789 -66555764 - AluSp SINE Alu -170 143 1 481 269 77 48 chr17 22948841 22949049 -66555504 - L1M4 LINE L1 -2210 3936 3723 2283 60 7 17 chr17 22949052 22949354 -66555199 - AluY SINE Alu -12 299 1 23 33 0 0 chr17 22949476 22949506 -66555047 + AT_rich Low_complexity Low_complexity 1 30 0 658 290 52 13 chr17 22949897 22950128 -66554425 - MIR SINE MIR -16 246 7 427 273 39 54 chr17 22950134 22950339 -66554214 - L2 LINE L2 -169 3103 2902 494 181 143 0 chr17 22951060 22951165 -66553388 - MER103 DNA DNA -46 120 1 383 318 52 26 chr17 22951745 22951899 -66552654 - L1MC4a LINE L1 -1603 6205 6048 3934 180 66 41 chr17 22951900 22952817 -66551736 - L1MB7 LINE L1 -7 6177 5256 1586 215 36 34 chr17 22953109 22953527 -66551026 - L1MB7 LINE L1 -849 5297 4879 * 4192 227 47 78 chr17 22953525 22953867 -66550686 - L1MB7 LINE L1 -1893 4253 3902 2244 109 0 0 chr17 22953867 22954178 -66550375 - AluY SINE Alu 0 311 1 4192 227 47 78 chr17 22954178 22954547 -66550006 - L1MB7 LINE L1 -2244 3902 3523 2261 99 7 0 chr17 22954547 22954851 -66549702 - AluSp SINE Alu -7 306 1 4192 227 47 78 chr17 22954851 22956004 -66548549 - L1MB7 LINE L1 -2623 3523 2415 2027 119 3 19 chr17 22956004 22956177 -66548376 - AluSq SINE Alu -7 306 139 2206 124 0 0 chr17 22956177 22956476 -66548077 - AluSc SINE Alu -10 299 1 2027 119 3 19 chr17 22956476 22956613 -66547940 - AluSq SINE Alu -174 139 1 4192 227 47 78 chr17 22956613 22956631 -66547922 - L1MB7 LINE L1 -3731 2415 2398 363 145 12 48 chr17 22956614 22956697 -66547856 - L1 LINE L1 -893 5253 5174 * 307 143 0 14 chr17 22957692 22957762 -66546791 - L1PA16 LINE L1 -18 6148 6080 753 233 12 6 chr17 22958303 22958466 -66546087 - FRAM SINE Alu -2 164 1 2281 119 3 0 chr17 22959006 22959308 -66545245 + AluSq SINE Alu 1 303 -10 1452 254 59 61 chr17 22959392 22959458 -66545095 - MER82 DNA MER2_type 0 653 588 1982 95 84 4 chr17 22959458 22959731 -66544822 - AluSp SINE Alu -18 295 1 1452 254 59 61 chr17 22959731 22960120 -66544433 - MER82 DNA MER2_type -65 588 199 215 307 10 30 chr17 22961192 22961293 -66543260 + MER5B DNA MER1_type 63 161 -17 272 342 0 40 chr17 22961465 22961614 -66542939 - MER5B DNA MER1_type -33 145 3 204 40 0 0 chr17 22962629 22962654 -66541899 + (GGA)n Simple_repeat Simple_repeat 1 25 0 184 316 13 13 chr17 22964698 22964777 -66539776 + MIR3 SINE MIR 118 196 -12 3535 83 26 14 chr17 22966721 22967226 -66537327 + MER9 LTR ERVK 1 511 0 2388 81 7 0 chr17 22967982 22968277 -66536276 - AluY SINE Alu -14 297 1 349 311 108 37 chr17 22968715 22969159 -66535394 - L1ME4a LINE L1 -97 6024 5501 2518 62 0 3 chr17 22969159 22969465 -66535088 - AluY SINE Alu -6 305 1 349 311 108 37 chr17 22969465 22969729 -66534824 - L1ME4a LINE L1 -620 5501 5257 1536 211 13 0 chr17 22969766 22970064 -66534489 - AluJb SINE Alu -10 302 1 306 87 0 0 chr17 22970261 22970307 -66534246 + (CA)n Simple_repeat Simple_repeat 1 46 0 2090 108 10 10 chr17 22970727 22971015 -66533538 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr17 22971015 22971048 -66533505 + AT_rich Low_complexity Low_complexity 1 33 0 1022 182 27 23 chr17 22971942 22972162 -66532391 - L1 LINE L1 -2091 4055 3835 3724 146 11 22 chr17 22972166 22973261 -66531292 + L1MA4A LINE L1 4970 6019 -284 1465 208 0 24 chr17 22973316 22973605 -66530948 + AluJo SINE Alu 1 282 -30 327 295 100 16 chr17 22973659 22973849 -66530704 - L1ME LINE L1 -429 5692 5487 3900 227 163 70 chr17 22974152 22974495 -66530058 - HAL1 LINE L1 -109 2398 2088 2223 111 10 0 chr17 22974495 22974793 -66529760 - AluSx SINE Alu -11 301 1 3900 227 163 70 chr17 22974793 22975661 -66528892 - HAL1 LINE L1 -419 2088 1301 2382 103 42 3 chr17 22975661 22976021 -66528532 - L1MB2 LINE L1 -4 6167 5794 3900 227 163 70 chr17 22976021 22976992 -66527561 - HAL1 LINE L1 -1206 1301 14 225 0 0 0 chr17 22977072 22977097 -66527456 + (TG)n Simple_repeat Simple_repeat 2 26 0 249 33 0 0 chr17 22977110 22977140 -66527413 + (CA)n Simple_repeat Simple_repeat 1 30 0 475 311 103 38 chr17 22977483 22977882 -66526671 - L1ME LINE L1 -1940 4206 3782 1771 164 7 32 chr17 22978096 22978406 -66526147 + AluJo SINE Alu 1 302 -10 2678 46 0 0 chr17 22978472 22978777 -66525776 - AluY SINE Alu -6 305 1 328 210 74 0 chr17 22980533 22980614 -66523939 - MIR3 SINE MIR -54 154 68 1301 271 138 24 chr17 22981397 22981478 -66523075 + L1ME2 LINE L1 5491 5561 -603 1920 142 6 22 chr17 22981478 22981795 -66522758 + AluJb SINE Alu 1 312 0 1301 271 138 24 chr17 22981795 22982254 -66522299 + L1ME2 LINE L1 5561 6107 -57 1772 163 10 7 chr17 22982254 22982549 -66522004 + AluJo SINE Alu 1 296 -16 1301 271 138 24 chr17 22982549 22982601 -66521952 + L1ME2 LINE L1 6107 6152 -12 3133 175 56 24 chr17 22983054 22983467 -66521086 + L1MB3 LINE L1 5443 5909 -275 2442 91 7 0 chr17 22983467 22983774 -66520779 + AluSx SINE Alu 1 309 -3 3133 175 56 24 chr17 22983774 22984058 -66520495 + L1MB3 LINE L1 5909 6182 -2 651 205 0 8 chr17 22984147 22984274 -66520279 - AluJb SINE Alu -100 212 87 385 77 10 34 chr17 22984377 22984443 -66520110 + AluSp/q SINE Alu 240 296 -7 1202 202 40 78 chr17 22984592 22984963 -66519590 + MSTD LTR MaLR 1 357 -39 699 224 19 9 chr17 22985058 22985272 -66519281 - L1MC/D LINE L1 -2311 5474 5259 442 187 19 47 chr17 22985325 22985432 -66519121 - L1MC/D LINE L1 -885 5261 5158 25 31 0 0 chr17 22985453 22985485 -66519068 + AT_rich Low_complexity Low_complexity 1 32 0 2701 169 17 117 chr17 22985510 22985684 -66518869 - LTR34 LTR ERV1 -2 697 507 2305 92 3 0 chr17 22985684 22985978 -66518575 + AluSp SINE Alu 1 295 -18 2701 169 17 117 chr17 22985978 22986574 -66517979 - LTR34 LTR ERV1 -192 507 4 325 181 0 83 chr17 22986874 22986946 -66517607 + AluJ/FLAM SINE Alu 1 57 -245 864 162 7 26 chr17 22986988 22987142 -66517411 + AluJb SINE Alu 3 153 -159 2213 117 0 0 chr17 22987270 22987561 -66516992 + AluSg SINE Alu 2 292 -18 304 251 48 36 chr17 22987576 22987743 -66516810 - L1MC4a LINE L1 -1524 6284 6116 285 69 103 0 chr17 22987910 22987997 -66516556 + (TA)n Simple_repeat Simple_repeat 2 97 0 413 279 157 34 chr17 22987998 22988292 -66516261 - L1MC4a LINE L1 -1849 5959 5630 677 138 14 51 chr17 22988788 22988926 -66515627 - FLAM_C SINE Alu 0 133 1 885 165 0 0 chr17 22990150 22990283 -66514270 + AluSq/x SINE Alu 1 133 -180 183 281 288 13 chr17 22990828 22990981 -66513572 + MIR SINE MIR 38 232 -30 2129 135 78 66 chr17 22990995 22991037 -66513516 - MSTA LTR MaLR 0 428 388 2170 137 0 0 chr17 22991037 22991337 -66513216 + AluSx SINE Alu 1 300 -12 2129 135 78 66 chr17 22991337 22991384 -66513169 - MSTA LTR MaLR -40 388 343 2348 93 0 7 chr17 22991384 22991685 -66512868 + AluY SINE Alu 2 300 -11 2129 135 78 66 chr17 22991685 22992017 -66512536 - MSTA LTR MaLR -85 343 1 1441 201 0 19 chr17 22992165 22992433 -66512120 + AluJb SINE Alu 1 263 -49 395 105 0 7 chr17 22992434 22992495 -66512058 - Alu SINE Alu -246 55 3 2082 126 19 13 chr17 22992503 22992813 -66511740 - AluSx SINE Alu 0 312 1 558 67 0 0 chr17 22992882 22992957 -66511596 + (CA)n Simple_repeat Simple_repeat 2 76 0 2519 69 3 0 chr17 22995867 22996170 -66508383 + AluY SINE Alu 1 304 -7 195 69 0 0 chr17 22996784 22996813 -66507740 + (TG)n Simple_repeat Simple_repeat 2 30 0 339 254 15 90 chr17 22996885 22997019 -66507534 + L2 LINE L2 3189 3312 -1 248 261 136 45 chr17 22997214 22997390 -66507163 - LTR67 LTR ERVL -8 549 358 268 253 71 29 chr17 22998007 22998165 -66506388 - L1MC4a LINE L1 -747 5399 5262 698 291 99 60 chr17 22998388 22999422 -66505131 + L1ME LINE L1 829 1938 -4669 1862 246 68 56 chr17 22999424 22999989 -66504564 + L1ME LINE L1 3478 4061 -2365 2265 78 7 0 chr17 22999989 23000300 -66504253 - AluSp SINE Alu 0 313 1 1862 246 68 56 chr17 23000300 23000641 -66503912 + L1ME LINE L1 4061 4396 -2030 643 222 25 84 chr17 23000899 23000970 -66503583 - MIR SINE MIR -3 259 185 2293 108 3 3 chr17 23000970 23001277 -66503276 - AluSx SINE Alu -5 307 1 643 222 25 84 chr17 23001277 23001408 -66503145 - MIR SINE MIR -77 185 69 1109 109 81 97 chr17 23001626 23001741 -66502812 - L1MB1 LINE L1 0 6168 6053 1292 98 57 0 chr17 23001741 23001935 -66502618 - L1PA16 LINE L1 -9 6157 5953 1109 109 81 97 chr17 23001935 23002066 -66502487 - L1MB1 LINE L1 -115 6053 5926 1577 117 53 148 chr17 23002067 23002479 -66502074 + THE1C LTR MaLR 1 373 -2 8846 126 51 8 chr17 23002481 23003833 -66500720 + THE1C-int LTR MaLR 1 1410 -170 3325 138 14 31 chr17 23003859 23004432 -66500121 - L1MB1 LINE L1 -239 5929 5367 674 176 59 17 chr17 23005039 23005158 -66499395 - FLAM_C SINE Alu -9 124 1 204 383 100 0 chr17 23005569 23005689 -66498864 + MIR3 SINE MIR 70 201 -7 729 197 0 44 chr17 23005707 23005844 -66498709 + FLAM_A SINE Alu 2 132 -1 1540 185 119 29 chr17 23005943 23006364 -66498189 + LTR2B LTR ERV1 32 490 0 388 200 67 0 chr17 23006577 23006667 -66497886 + MER45A DNA AcHobo 31 126 -52 183 243 0 0 chr17 23007359 23007396 -66497157 + L2 LINE L2 3190 3226 -87 1859 147 26 16 chr17 23008232 23008539 -66496014 - AluSg SINE Alu 0 310 1 180 0 0 0 chr17 23008835 23008855 -66495698 + (T)n Simple_repeat Simple_repeat 1 20 0 466 104 30 0 chr17 23008867 23008934 -66495619 - AluSp/q SINE Alu -84 229 161 1586 164 73 4 chr17 23009518 23009679 -66494874 - AluJo SINE Alu -13 299 110 306 0 0 0 chr17 23009679 23009713 -66494840 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1586 164 73 4 chr17 23009713 23009825 -66494728 - AluJo SINE Alu -202 110 7 276 353 60 9 chr17 23010460 23010576 -66493977 + MER91A DNA MER1_type 48 169 -27 3016 128 31 26 chr17 23010576 23011154 -66493399 - LTR35 LTR ERV1 0 618 38 2050 131 3 0 chr17 23011439 23011744 -66492809 - AluSx SINE Alu -6 306 1 532 129 0 0 chr17 23012024 23012117 -66492436 - LTR9B LTR ERV1 -84 560 468 1449 298 34 7 chr17 23012117 23012681 -66491872 - L1ME3A LINE L1 -286 5884 5306 335 268 28 0 chr17 23012719 23012861 -66491692 - L1ME3A LINE L1 -814 5332 5187 9559 23 1 206 chr17 23012960 23014639 -66489914 + SVA Other Other 47 1381 -5 318 237 10 0 chr17 23014644 23014741 -66489812 - L1ME3A LINE L1 -966 5180 5083 2265 76 0 41 chr17 23014748 23015063 -66489490 + AluY SINE Alu 1 302 -9 239 250 13 0 chr17 23015065 23015141 -66489412 + L1MB7 LINE L1 6108 6184 0 25 95 0 0 chr17 23015223 23015297 -66489256 + AT_rich Low_complexity Low_complexity 1 74 0 1985 131 0 0 chr17 23015300 23015604 -66488949 + AluSx SINE Alu 1 304 0 685 229 10 42 chr17 23016285 23016477 -66488076 + MER58A DNA MER1_type 30 215 -9 366 62 250 0 chr17 23016494 23016558 -66487995 - MADE1 DNA Mariner 0 80 1 1337 143 113 0 chr17 23016619 23016850 -66487703 + AluJb SINE Alu 1 257 -55 1589 146 20 0 chr17 23017223 23017476 -66487077 - AluJb SINE Alu -52 260 3 690 124 0 0 chr17 23017623 23017728 -66486825 - AluSg/x SINE Alu -3 306 202 318 109 0 0 chr17 23017755 23017810 -66486743 + AluJb SINE Alu 248 302 0 367 332 137 34 chr17 23018668 23018873 -66485680 - MIR SINE MIR -19 243 18 2224 94 0 10 chr17 23019147 23019446 -66485107 + AluSx SINE Alu 1 296 -16 2078 133 0 0 chr17 23019446 23019740 -66484813 + AluSc SINE Alu 1 294 -15 2149 113 0 3 chr17 23019746 23020048 -66484505 + AluSx SINE Alu 1 301 -11 1857 156 0 9 chr17 23020055 23020370 -66484183 + AluJb SINE Alu 1 312 0 270 233 159 91 chr17 23020393 23020569 -66483984 - L2 LINE L2 -240 3073 2886 318 204 11 11 chr17 23020577 23020665 -66483888 + FLAM_A SINE Alu 46 133 0 2209 106 0 13 chr17 23020668 23020803 -66483750 + AluSx SINE Alu 1 136 -176 2080 112 23 3 chr17 23020803 23021108 -66483445 + AluSx SINE Alu 1 311 -1 2209 106 0 13 chr17 23021108 23021283 -66483270 + AluSx SINE Alu 136 307 -5 2420 50 7 3 chr17 23021286 23021587 -66482966 + AluY SINE Alu 1 302 -9 251 266 78 0 chr17 23021886 23021950 -66482603 - MIR SINE MIR -110 152 84 1444 120 0 5 chr17 23022090 23022299 -66482254 - AluY SINE Alu 0 311 104 22 56 0 0 chr17 23022763 23022799 -66481754 + GC_rich Low_complexity Low_complexity 1 36 0 222 310 0 60 chr17 23022951 23023051 -66481502 + MIR SINE MIR 60 153 -109 250 340 19 28 chr17 23023836 23023942 -66480611 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 23023960 23024038 -66480515 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 23024370 23024422 -66480131 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 23024959 23025051 -66479502 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 23025185 23025289 -66479264 + MIR SINE MIR 17 121 -141 299 272 78 0 chr17 23025680 23025783 -66478770 - L2 LINE L2 -245 3027 2917 371 242 117 25 chr17 23026016 23026185 -66478368 - MIR SINE MIR -63 145 11 364 276 31 0 chr17 23027286 23027384 -66477169 - MIR SINE MIR -122 140 40 1974 108 39 0 chr17 23027974 23028278 -66476275 - AluSx SINE Alu 0 315 1 225 267 47 12 chr17 23029523 23029609 -66474944 - L2 LINE L2 -261 3011 2923 2154 106 0 7 chr17 23031028 23031320 -66473233 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 23031327 23031631 -66472922 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 23034240 23034345 -66470208 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 23035112 23035173 -66469380 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 23036195 23036238 -66468315 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr17 23036402 23036431 -66468122 + GC_rich Low_complexity Low_complexity 1 29 0 2353 81 0 7 chr17 23036606 23036914 -66467639 + AluY SINE Alu 1 306 -5 2230 68 4 0 chr17 23037742 23038056 -66466497 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 23040640 23041007 -66463546 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 23042129 23042422 -66462131 - AluSx SINE Alu -21 291 1 401 262 19 10 chr17 23043789 23043892 -66460661 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 23044594 23044648 -66459905 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 23046871 23046904 -66457649 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 23049186 23049491 -66455062 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 23049518 23049632 -66454921 - MIR3 SINE MIR -54 154 63 1112 53 0 0 chr17 23050450 23050582 -66453971 - AluY SINE Alu -179 132 1 2099 135 7 0 chr17 23050583 23050886 -66453667 - AluSx SINE Alu -7 305 1 828 113 9 0 chr17 23051680 23051795 -66452758 - FLAM_C SINE Alu -15 118 3 2946 198 99 19 chr17 23052206 23052492 -66452061 + MER21B LTR ERV1 5 267 -596 1964 123 6 44 chr17 23052492 23052810 -66451743 + AluSg SINE Alu 1 306 -4 2946 198 99 19 chr17 23052810 23053307 -66451246 + MER21B LTR ERV1 267 851 -12 2069 91 45 0 chr17 23053417 23053704 -66450849 - AluSp SINE Alu -13 300 1 446 294 106 49 chr17 23054372 23054617 -66449936 + MIR SINE MIR 4 262 0 229 330 46 55 chr17 23054779 23054888 -66449665 - MIR SINE MIR -6 256 149 206 304 20 39 chr17 23055718 23055820 -66448733 + MIR SINE MIR 50 149 -59 34 0 0 22 chr17 23056614 23056646 -66447907 + AT_rich Low_complexity Low_complexity 1 33 -11 2036 132 7 0 chr17 23056646 23056934 -66447619 - AluSx SINE Alu -22 290 1 34 0 0 22 chr17 23056934 23056946 -66447607 + AT_rich Low_complexity Low_complexity 33 44 0 883 185 6 6 chr17 23056946 23057108 -66447445 + AluJb SINE Alu 131 292 -20 1016 90 0 0 chr17 23057114 23057247 -66447306 + AluY SINE Alu 1 133 -178 2320 79 0 0 chr17 23057247 23057539 -66447014 + AluY SINE Alu 1 292 -19 1039 216 112 14 chr17 23057540 23057818 -66446735 - Charlie1b DNA MER1_type -2380 381 61 2247 94 0 0 chr17 23057818 23058105 -66446448 - AluSc SINE Alu -22 287 1 1039 216 112 14 chr17 23058105 23058173 -66446380 - Charlie1b DNA MER1_type -2700 61 1 317 324 117 45 chr17 23059328 23059550 -66445003 - MIR SINE MIR -5 257 20 2212 101 10 3 chr17 23059592 23059899 -66444654 - AluSp SINE Alu -4 309 1 216 246 28 39 chr17 23059902 23059992 -66444561 - MIR SINE MIR -62 146 61 261 202 146 22 chr17 23060157 23060246 -66444307 + MIR SINE MIR 79 178 -84 2269 68 3 7 chr17 23060848 23061140 -66443413 + AluY SINE Alu 1 291 -20 2398 44 3 38 chr17 23061140 23061457 -66443096 + AluY SINE Alu 1 306 -5 1802 122 90 0 chr17 23061484 23061762 -66442791 - AluJb SINE Alu -7 305 3 1963 95 43 23 chr17 23062564 23062869 -66441684 + AluSx SINE Alu 1 311 -1 1567 169 36 11 chr17 23062878 23063156 -66441397 + AluJo SINE Alu 1 285 -27 212 364 74 11 chr17 23063452 23063628 -66440925 - MIR SINE MIR -41 221 35 2819 191 32 49 chr17 23063763 23063846 -66440707 - L1MB5 LINE L1 -184 5990 5907 1655 111 118 11 chr17 23063846 23064117 -66440436 + AluSg1 SINE Alu 1 300 -9 2819 191 32 49 chr17 23064117 23064705 -66439848 - L1MB5 LINE L1 -267 5907 5331 2214 104 3 13 chr17 23064705 23065021 -66439532 - AluSq SINE Alu 0 313 1 2819 191 32 49 chr17 23065021 23065098 -66439455 - L1MB5 LINE L1 -843 5331 5254 226 267 25 83 chr17 23065170 23065290 -66439263 + MIR SINE MIR 27 139 -69 2249 177 63 72 chr17 23066327 23066886 -66437667 + MLT2B3 LTR ERVL 1 554 0 1881 152 7 10 chr17 23067184 23067487 -66437066 + AluSx SINE Alu 1 302 -10 560 165 0 0 chr17 23067498 23067583 -66436970 + AluJ/FLAM SINE Alu 8 92 -220 1166 188 58 0 chr17 23067597 23067820 -66436733 - AluJo SINE Alu -76 236 1 337 243 93 28 chr17 23068758 23068865 -66435688 - MIR SINE MIR -36 226 113 2252 85 0 3 chr17 23069412 23069705 -66434848 + AluSc SINE Alu 1 292 -17 1595 209 36 25 chr17 23069883 23070242 -66434311 + MLT1A1 LTR MaLR 1 363 -2 2046 112 0 7 chr17 23070264 23070571 -66433982 - AluSp SINE Alu 0 305 1 2212 104 0 0 chr17 23070578 23070875 -66433678 - AluSc SINE Alu -12 297 1 191 175 75 0 chr17 23073316 23073356 -66431197 + MIR SINE MIR 93 135 -73 266 319 11 0 chr17 23073411 23073505 -66431048 - MIR SINE MIR -56 152 58 263 278 56 0 chr17 23076601 23076691 -66427862 + MIR3 SINE MIR 61 155 -53 193 297 69 76 chr17 23076738 23076883 -66427670 - L2 LINE L2 -18 3254 3111 234 282 239 8 chr17 23076905 23077022 -66427531 - MIR SINE MIR 0 262 119 802 141 0 8 chr17 23077024 23077152 -66427401 + AluJo/FLAM SINE Alu 5 131 -181 2255 39 13 46 chr17 23077155 23077461 -66427092 + AluY SINE Alu 1 296 -15 1424 172 65 38 chr17 23077593 23077727 -66426826 + AluJo SINE Alu 1 130 -172 2105 84 6 47 chr17 23077727 23078049 -66426504 + AluY SINE Alu 1 309 -2 1424 172 65 38 chr17 23078049 23078204 -66426349 + AluJo SINE Alu 130 298 -4 241 256 61 12 chr17 23079889 23079971 -66424582 + MIR SINE MIR 59 144 -118 237 319 14 0 chr17 23080840 23080909 -66423644 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 23081144 23081365 -66423188 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 23081366 23081712 -66422841 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 23082055 23082351 -66422202 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 23082782 23082834 -66421719 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 23083134 23083179 -66421374 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 23083223 23083252 -66421301 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 23083436 23083605 -66420948 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 186 342 40 0 chr17 23084003 23084079 -66420474 + MIR SINE MIR 90 168 -94 210 340 40 27 chr17 23084084 23084234 -66420319 + L2 LINE L2 2873 3024 -248 398 317 32 0 chr17 23084773 23084896 -66419657 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 23084979 23085032 -66419521 + MIR SINE MIR 16 72 -136 661 164 0 0 chr17 23085059 23085169 -66419384 + AluJb SINE Alu 1 110 -202 1876 94 0 109 chr17 23135748 23135813 -66368740 - L1P4 LINE L1 -586 5579 5509 1861 123 0 14 chr17 23135813 23136098 -66368455 + AluSx SINE Alu 1 281 -31 2674 71 3 38 chr17 23136098 23136336 -66368217 + THE1A LTR MaLR 2 224 -131 2274 83 0 19 chr17 23136336 23136650 -66367903 + AluSg SINE Alu 1 308 -2 2674 71 3 38 chr17 23136650 23136778 -66367775 + THE1A LTR MaLR 224 355 0 1876 94 0 109 chr17 23136778 23137061 -66367492 - L1P4 LINE L1 -654 5511 5268 3764 88 46 12 chr17 23137061 23137628 -66366925 + L1PA11 LINE L1 5588 6173 -1 2774 16 0 0 chr17 23137965 23138283 -66366270 - AluYb8 SINE Alu 0 318 1 1623 175 30 3 chr17 23139318 23139615 -66364938 + AluJo SINE Alu 7 311 -1 250 138 35 17 chr17 23139618 23139676 -66364877 + GA-rich Low_complexity Low_complexity 4 62 0 338 357 54 9 chr17 23141055 23141279 -66363274 - L1MEc LINE L1 -6014 382 149 310 291 22 93 chr17 23141287 23141469 -66363084 + L1MB3 LINE L1 4993 5161 -985 1642 192 0 7 chr17 23141530 23141832 -66362721 + AluJb SINE Alu 1 300 -12 358 224 140 14 chr17 23141839 23141982 -66362571 + L1MB3 LINE L1 5317 5477 -2331 1779 150 0 29 chr17 23142213 23142526 -66362027 - AluJo SINE Alu -8 304 1 378 261 7 29 chr17 23142820 23142958 -66361595 - L1M4 LINE L1 -1447 4699 4565 607 207 44 58 chr17 23144132 23144320 -66360233 - MER6 DNA MER2_type -1 864 -52 356 220 22 44 chr17 23144425 23144516 -66360037 + MIR3 SINE MIR 72 160 -48 986 186 72 0 chr17 23144652 23144846 -66359707 - MER3 DNA MER1_type -1 208 1 589 311 119 4 chr17 23144958 23145193 -66359360 + MIR SINE MIR 1 262 0 292 243 0 0 chr17 23145263 23145341 -66359212 - L1ME LINE L1 -374 5747 5670 226 222 19 0 chr17 23145352 23145406 -66359147 - L1ME LINE L1 -526 5595 5541 302 294 12 0 chr17 23145441 23145526 -66359027 - L1MB3 LINE L1 -268 5915 5830 2402 80 3 0 chr17 23145797 23146109 -66358444 + AluSp SINE Alu 1 313 0 21 0 0 0 chr17 23146580 23146601 -66357952 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr17 23146698 23146719 -66357834 + (GA)n Simple_repeat Simple_repeat 2 22 0 821 228 0 0 chr17 23146719 23146864 -66357689 - FRAM SINE Alu -34 142 1 1492 203 37 23 chr17 23147516 23147865 -66356688 + L1MB3 LINE L1 5830 6183 0 1483 182 3 38 chr17 23148997 23149315 -66355238 + AluJo SINE Alu 1 307 -5 466 355 22 33 chr17 23150190 23150463 -66354090 + L1ME LINE L1 3777 4046 -2100 41 0 0 0 chr17 23150463 23150504 -66354049 + AT_rich Low_complexity Low_complexity 1 41 0 355 314 82 44 chr17 23150526 23150639 -66353914 + L1ME LINE L1 4074 4196 -1950 1719 130 92 3 chr17 23150639 23150923 -66353630 + AluSc SINE Alu 1 309 0 355 314 82 44 chr17 23150923 23150968 -66353585 + L1ME LINE L1 4196 4238 -1908 1280 253 24 24 chr17 23151443 23151822 -66352731 + HAL1 LINE L1 15 393 -2114 2240 233 139 59 chr17 23151846 23151938 -66352615 + HAL1 LINE L1 504 587 -1920 1751 125 68 0 chr17 23151938 23152217 -66352336 - AluSx SINE Alu -14 298 1 2240 233 139 59 chr17 23152217 23152649 -66351904 + HAL1 LINE L1 587 983 -1524 2336 151 8 8 chr17 23152649 23153047 -66351506 + L1MB2 LINE L1 5773 6170 -1 2240 233 139 59 chr17 23153047 23153715 -66350838 + HAL1 LINE L1 983 1793 -714 1024 261 144 35 chr17 23153729 23154334 -66350219 + HAL1 LINE L1 1837 2507 0 282 256 106 39 chr17 23154529 23154709 -66349844 + L1ME LINE L1 5469 5660 -461 1368 176 3 88 chr17 23154782 23155101 -66349452 - AluJo SINE Alu -17 295 4 1793 186 8 32 chr17 23155126 23155502 -66349051 - L1MB5 LINE L1 -6 6168 5802 1162 184 29 21 chr17 23155506 23155745 -66348808 - MER68 LTR ERV1 -25 537 297 1150 92 13 2 chr17 23155746 23155985 -66348568 + AluSp SINE Alu 2 292 -21 1388 170 112 4 chr17 23155985 23156262 -66348291 - MER68 LTR ERV1 -255 307 1 509 206 227 16 chr17 23157719 23157913 -66346640 - MLT1E2 LTR MaLR -255 371 137 581 251 99 22 chr17 23158591 23158814 -66345739 + L2 LINE L2 3019 3258 -55 2360 59 0 3 chr17 23158829 23159117 -66345436 - AluY SINE Alu -24 287 1 4193 167 44 6 chr17 23159183 23160600 -66343953 + L1PA16 LINE L1 4492 5962 -204 2302 96 0 0 chr17 23160668 23160959 -66343594 + AluSx SINE Alu 22 312 0 1193 166 15 0 chr17 23160985 23161184 -66343369 + L1PA16 LINE L1 5962 6163 -3 198 0 0 0 chr17 23161511 23161533 -66343020 + (CA)n Simple_repeat Simple_repeat 1 22 0 1874 50 0 0 chr17 23161895 23162114 -66342439 - L1PA5 LINE L1 -8 6146 5928 464 232 0 0 chr17 23162431 23162530 -66342023 - FRAM SINE Alu -52 124 26 2204 255 45 58 chr17 23162846 23163646 -66340907 + L1ME3A LINE L1 5379 6168 -2 2582 44 0 0 chr17 23163896 23164189 -66340364 - AluY SINE Alu -9 302 10 3435 137 37 54 chr17 23164206 23164835 -66339718 + LTR35 LTR ERV1 1 618 0 418 315 54 7 chr17 23164845 23164994 -66339559 - MER91A DNA MER1_type -40 156 1 1709 185 3 19 chr17 23165608 23165916 -66338637 + AluJo SINE Alu 1 303 -9 501 235 195 0 chr17 23168131 23168280 -66336273 - MER45A DNA AcHobo 0 178 1 644 211 23 23 chr17 23168554 23168687 -66335866 - FLAM_A SINE Alu 0 133 1 275 256 149 14 chr17 23168700 23168841 -66335712 - MIR3 SINE MIR -3 205 43 2490 68 0 0 chr17 23169242 23169538 -66335015 + AluY SINE Alu 1 296 -15 1632 174 10 24 chr17 23169547 23169841 -66334712 + AluJo SINE Alu 1 290 -22 380 103 0 0 chr17 23169931 23169989 -66334564 + L1MB2 LINE L1 6107 6164 -7 264 280 91 38 chr17 23170350 23170482 -66334071 + MIR3 SINE MIR 37 175 -33 523 298 84 0 chr17 23170919 23171097 -66333456 - MIR SINE MIR -21 241 49 378 0 0 0 chr17 23171242 23171284 -66333269 + (CA)n Simple_repeat Simple_repeat 2 43 0 899 144 0 0 chr17 23171453 23171585 -66332968 + FLAM_C SINE Alu 2 133 0 4357 166 23 25 chr17 23172256 23172956 -66331597 + L1MB1 LINE L1 5367 6066 -102 1268 104 74 15 chr17 23172956 23173157 -66331396 + L1PA16 LINE L1 5953 6166 0 4357 166 23 25 chr17 23173157 23173247 -66331306 + L1MB1 LINE L1 6066 6155 -13 706 232 49 22 chr17 23173503 23173688 -66330865 + MIR SINE MIR 70 259 -3 313 239 130 0 chr17 23173693 23173785 -66330768 - L1MC/D LINE L1 -2027 5850 5747 1243 268 83 39 chr17 23173945 23174177 -66330376 - L1MC/D LINE L1 -2030 4185 3965 1956 145 14 7 chr17 23174177 23174474 -66330079 - AluSx SINE Alu -13 299 1 1243 268 83 39 chr17 23174474 23175086 -66329467 - L1MC/D LINE L1 -2250 3965 3267 832 263 90 73 chr17 23175088 23175976 -66328577 - L1MDa LINE L1 -4532 1683 817 2069 129 0 0 chr17 23175977 23176281 -66328272 - AluSg SINE Alu 0 304 1 300 265 173 49 chr17 23176670 23176855 -66327698 + L1ME4a LINE L1 5265 5472 -2336 238 194 194 65 chr17 23177433 23177603 -66326950 + LTR67 LTR ERVL 358 549 -8 409 244 15 89 chr17 23177800 23177935 -66326618 - L2 LINE L2 0 3313 3189 232 298 0 24 chr17 23178005 23178089 -66326464 + L1ME4a LINE L1 5936 6017 -104 30 0 0 0 chr17 23180992 23181022 -66323531 + AT_rich Low_complexity Low_complexity 1 30 0 1916 130 0 39 chr17 23181177 23181484 -66323069 - AluSx SINE Alu -17 295 1 223 154 0 0 chr17 23181831 23181870 -66322683 + (TG)n Simple_repeat Simple_repeat 1 39 0 328 281 274 0 chr17 23182553 23182706 -66321847 - MIR SINE MIR -30 232 38 181 267 17 17 chr17 23183518 23183578 -66320975 + L2 LINE L2 2922 2981 -332 23 33 0 0 chr17 23184578 23184608 -66319945 + AT_rich Low_complexity Low_complexity 1 30 0 465 326 100 27 chr17 23185059 23185202 -66319351 + L1ME4a LINE L1 5258 5389 -732 1922 140 0 69 chr17 23185202 23185537 -66319016 + AluJb SINE Alu 1 312 0 465 326 100 27 chr17 23185537 23186004 -66318549 + L1ME4a LINE L1 5389 5906 -215 1911 145 3 0 chr17 23187377 23187659 -66316894 + AluSq SINE Alu 1 283 -30 2413 92 7 0 chr17 23187808 23188146 -66316407 + AluSq SINE Alu 3 313 0 21 0 0 0 chr17 23188742 23188763 -66315790 + AT_rich Low_complexity Low_complexity 1 21 0 714 183 16 8 chr17 23191759 23191885 -66312668 + FLAM_A SINE Alu 12 138 -4 337 329 0 46 chr17 23194115 23194267 -66310286 + MER5B DNA MER1_type 4 148 -30 219 293 20 30 chr17 23194438 23194537 -66310016 - MER5B DNA MER1_type -17 161 64 592 252 52 0 chr17 23195131 23195266 -66309287 + MER82 DNA MER2_type 2 143 -510 1757 163 0 43 chr17 23195712 23196037 -66308516 - AluJb SINE Alu -1 311 1 1770 251 61 5 chr17 23196046 23196473 -66308080 + MER82 DNA MER2_type 203 653 0 805 182 54 0 chr17 23197076 23197224 -66307329 + FRAM SINE Alu 10 165 -11 2013 69 4 4 chr17 23197538 23197785 -66306768 - AluSq SINE Alu -65 248 2 419 141 0 0 chr17 23198078 23198149 -66306404 + L1PA16 LINE L1 6080 6150 -16 526 272 26 0 chr17 23199379 23199493 -66305060 + L2 LINE L2 3197 3313 0 17569 152 75 11 chr17 23199568 23201731 -66302822 + L1MA3 LINE L1 16 2429 -5136 2429 71 3 0 chr17 23201731 23202025 -66302528 - AluSg SINE Alu -15 295 1 17569 152 75 11 chr17 23202025 23202896 -66301657 + L1MA3 LINE L1 2429 3243 -4322 13770 155 28 25 chr17 23202875 23203074 -66301479 + L1MA3 LINE L1 3980 4177 -3547 * 2152 109 3 3 chr17 23203074 23203367 -66301186 - AluSx SINE Alu -19 293 1 13770 155 28 25 chr17 23203367 23206776 -66297777 + L1MA3 LINE L1 4177 7724 0 210 258 45 0 chr17 23206778 23206844 -66297709 + GA-rich Low_complexity Low_complexity 5 73 0 262 331 68 8 chr17 23206861 23206994 -66297559 - MER112 DNA MER1_type -118 142 2 332 251 217 49 chr17 23207008 23207211 -66297342 + MIR SINE MIR 15 251 -11 1290 185 66 28 chr17 23207364 23207651 -66296902 - AluJo SINE Alu -14 298 1 705 122 75 0 chr17 23208412 23208519 -66296034 - FLAM_A SINE Alu -7 135 21 493 171 28 185 chr17 23208920 23209131 -66295422 + LTR34 LTR ERV1 1 178 -521 2143 112 7 7 chr17 23210611 23210915 -66293638 + AluSx SINE Alu 1 304 -8 793 189 5 32 chr17 23211049 23211234 -66293319 + L1MB7 LINE L1 5103 5282 -864 1087 199 92 8 chr17 23211285 23211536 -66293017 + L1MB7 LINE L1 5913 6184 0 1653 158 40 30 chr17 23212026 23212329 -66292224 + AluJo SINE Alu 3 308 -4 29 60 0 0 chr17 23212536 23212586 -66291967 + AT_rich Low_complexity Low_complexity 1 50 0 183 283 0 50 chr17 23212624 23212684 -66291869 - L2 LINE L2 0 3272 3216 2025 125 107 24 chr17 23212747 23213083 -66291470 + THE1B LTR MaLR 1 364 0 369 189 11 33 chr17 23214762 23214852 -66289701 + MLT1L LTR MaLR 27 114 -501 970 159 13 6 chr17 23216452 23216609 -66287944 + FRAM SINE Alu 1 156 -20 280 314 44 15 chr17 23216637 23216774 -66287779 + L1M4 LINE L1 3983 4123 -2023 333 275 140 31 chr17 23217389 23217582 -66286971 + L1ME4a LINE L1 3001 3214 -2932 489 231 96 13 chr17 23217669 23217825 -66286728 + L1ME4a LINE L1 5952 6120 -1 753 278 130 44 chr17 23218540 23219062 -66285491 + L1ME4a LINE L1 5472 6038 -83 230 162 0 0 chr17 23219064 23219101 -66285452 + MLT1L LTR MaLR 576 612 -3 278 241 9 102 chr17 23219101 23219209 -66285344 + L2 LINE L2 2987 3084 -188 322 284 27 47 chr17 23221251 23221399 -66283154 + MLT1L LTR MaLR 114 258 -357 440 339 38 11 chr17 23221490 23221673 -66282880 + MLT1L LTR MaLR 426 613 -2 184 245 57 19 chr17 23222005 23222058 -66282495 + MER5B DNA MER1_type 69 123 -55 1665 136 24 0 chr17 23222594 23222845 -66281708 - Tigger2 DNA MER2_type -1 2717 2461 4029 161 59 16 chr17 23222876 23223620 -66280933 - Tigger2 DNA MER2_type -1940 778 3 2038 104 6 67 chr17 23223912 23224240 -66280313 - AluSq SINE Alu -5 308 1 1479 143 56 28 chr17 23225270 23225365 -66279188 + L1M2 LINE L1 5369 5460 -831 1925 88 0 15 chr17 23225365 23225627 -66278926 + AluSc SINE Alu 38 295 -14 1479 143 56 28 chr17 23225627 23225757 -66278796 + L1M2 LINE L1 5460 5585 -706 1587 137 0 36 chr17 23225757 23226035 -66278518 + AluJo SINE Alu 44 311 -1 2263 120 0 0 chr17 23226038 23226338 -66278215 + AluSx SINE Alu 7 306 -6 1479 143 56 28 chr17 23226338 23226394 -66278159 + L1M2 LINE L1 5586 5663 -628 1009 240 156 6 chr17 23226379 23226700 -66277853 + HAL1 LINE L1 1527 1895 -612 * 3506 128 26 1 chr17 23226716 23227311 -66277242 + MER41A-int LTR ERV1 226 1481 -5263 * 4478 143 112 16 chr17 23227278 23228226 -66276327 + MER41A-int LTR ERV1 909 2017 -3929 317 96 58 0 chr17 23228202 23228254 -66276299 + MER41A-int LTR ERV1 2167 2221 -3725 * 5263 135 63 55 chr17 23228250 23229659 -66274894 + MER41A-int LTR ERV1 3355 4874 -2942 1419 126 0 5 chr17 23229659 23229858 -66274695 + AluSg/x SINE Alu 100 297 -15 12613 100 32 10 chr17 23229862 23230615 -66273938 + MER41A-int LTR ERV1 2434 3170 -2776 2306 90 7 3 chr17 23230615 23230916 -66273637 + AluSc SINE Alu 1 302 -7 12613 100 32 10 chr17 23230916 23232002 -66272551 + MER41A-int LTR ERV1 3170 5944 -2 4577 73 15 0 chr17 23232002 23232548 -66272005 + MER41A LTR ERV1 1 554 0 765 211 13 52 chr17 23233018 23233144 -66271409 + L1MC1 LINE L1 5181 5295 -851 1659 156 3 117 chr17 23233144 23233478 -66271075 + AluJb SINE Alu 1 296 -6 765 211 13 52 chr17 23233478 23233583 -66270970 + L1MC1 LINE L1 5295 5403 -743 * 2018 80 0 16 chr17 23233582 23233924 -66270629 + L1PA7 LINE L1 5573 6154 0 3113 126 69 74 chr17 23233927 23234561 -66269992 + L1MC1 LINE L1 5386 6016 -317 560 131 12 0 chr17 23234613 23234697 -66269856 + FLAM SINE Alu 41 125 -18 1078 176 126 21 chr17 23234699 23234937 -66269616 + L1MC1 LINE L1 6066 6328 -5 258 224 37 127 chr17 23234962 23235096 -66269457 + HAL1 LINE L1 2378 2499 -8 327 199 96 83 chr17 23236663 23236819 -66267734 - MIR SINE MIR -21 241 84 2225 88 3 59 chr17 23236842 23237162 -66267391 + AluSx SINE Alu 1 302 -10 1119 273 71 47 chr17 23237188 23237694 -66266859 - L3 LINE CR1 -1 1576 1059 562 284 118 30 chr17 23237703 23238076 -66266477 - MLT1K LTR MaLR -6 582 177 1236 132 96 23 chr17 23238213 23238433 -66266120 + MER46A DNA MER2_type 1 236 0 1638 170 0 37 chr17 23238545 23238839 -66265714 + AluJb SINE Alu 1 283 -29 842 169 22 0 chr17 23238909 23239045 -66265508 + Tigger1 DNA MER2_type 1 139 -2279 * 1142 144 104 15 chr17 23239041 23239242 -66265311 + Tigger1 DNA MER2_type 2200 2418 0 2319 109 0 0 chr17 23239281 23239592 -66264961 + AluSx SINE Alu 1 311 -1 364 270 45 0 chr17 23239773 23239884 -66264669 - MLT1G LTR MaLR -12 543 428 691 265 137 13 chr17 23239924 23240255 -66264298 - MLT1G LTR MaLR -241 354 5 23 54 0 0 chr17 23240640 23240677 -66263876 + AT_rich Low_complexity Low_complexity 1 37 0 663 247 132 11 chr17 23240717 23240907 -66263646 - MIR SINE MIR -42 220 8 2162 105 0 35 chr17 23241215 23241528 -66263025 - AluSx SINE Alu -8 304 3 387 285 112 39 chr17 23241531 23241570 -66262983 - L1ME4a LINE L1 -296 5825 5790 1871 172 20 35 chr17 23241570 23241918 -66262635 - MER2 DNA MER2_type -1 343 1 387 285 112 39 chr17 23241918 23242307 -66262246 - L1ME4a LINE L1 -331 5790 5365 529 207 147 7 chr17 23242438 23242588 -66261965 + MLT1J LTR MaLR 5 175 -336 1672 203 0 9 chr17 23243003 23243318 -66261235 + AluJb SINE Alu 1 312 0 327 280 125 16 chr17 23244042 23244353 -66260200 - L1ME4a LINE L1 -2922 3224 2880 303 244 24 49 chr17 23244653 23244735 -66259818 + MER102a DNA MER1_type 1 80 -250 254 233 8 142 chr17 23244741 23244861 -66259692 + MER102a DNA MER1_type 221 324 -6 900 295 58 66 chr17 23245848 23246363 -66258190 + LTR67 LTR ERVL 45 555 -2 230 296 90 37 chr17 23246559 23246748 -66257805 - HAL1 LINE L1 -1154 1353 1155 1047 149 0 23 chr17 23247233 23247407 -66257146 + AluJb SINE Alu 136 305 -7 2344 91 0 3 chr17 23247410 23247717 -66256836 + AluSg SINE Alu 1 306 -4 644 262 151 0 chr17 23247732 23248056 -66256497 + L1ME4a LINE L1 5748 6120 -1 380 355 73 17 chr17 23248167 23248401 -66256152 + L2 LINE L2 2844 3090 -182 2194 178 101 13 chr17 23248488 23248944 -66255609 + MLT1D LTR MaLR 10 505 0 255 290 114 8 chr17 23249219 23249350 -66255203 - MIR SINE MIR -86 176 32 247 134 60 75 chr17 23249931 23249998 -66254555 + L1MEd LINE L1 1081 1146 -4973 457 264 77 5 chr17 23250823 23251031 -66253522 + LTR16A LTR ERVL 214 436 -14 34 0 0 0 chr17 23251079 23251113 -66253440 + AT_rich Low_complexity Low_complexity 1 34 0 1986 140 13 0 chr17 23251190 23251490 -66253063 + AluSq SINE Alu 1 304 -9 221 186 23 0 chr17 23252952 23252995 -66251558 - L2 LINE L2 -262 3051 3008 258 279 70 31 chr17 23253004 23253133 -66251420 + MER94 DNA DNA 1 134 0 221 250 31 52 chr17 23253154 23253250 -66251303 - L2 LINE L2 -335 2978 2885 1351 160 0 9 chr17 23253649 23253862 -66250691 + AluJo SINE Alu 81 291 -21 762 181 0 0 chr17 23255616 23255743 -66248810 + FLAM_C SINE Alu 1 127 -6 192 333 9 29 chr17 23255750 23255855 -66248698 - MIR3 SINE MIR -1 207 105 1802 142 15 4 chr17 23455990 23456258 -66048295 - AluSx SINE Alu -39 273 3 2150 155 23 51 chr17 23456273 23456550 -66048003 + LOR1b LTR ERV1 41 303 -158 1962 131 4 0 chr17 23456550 23456825 -66047728 - AluSq SINE Alu -15 298 23 2150 155 23 51 chr17 23456825 23456980 -66047573 + LOR1b LTR ERV1 303 461 0 461 252 17 8 chr17 23456982 23457101 -66047452 - MLT1G1 LTR MaLR -74 521 402 1927 155 17 0 chr17 23457221 23457518 -66047035 - AluJb SINE Alu -10 302 1 1001 107 0 21 chr17 23457518 23457658 -66046895 - AluSq/x SINE Alu -175 137 1 1883 139 0 58 chr17 23457680 23458010 -66046543 - AluJb SINE Alu -1 311 1 404 267 78 0 chr17 23458018 23458134 -66046419 + L1ME3A LINE L1 6041 6165 -5 713 115 0 0 chr17 23458142 23458238 -66046315 + AluSq/x SINE Alu 40 135 -178 299 299 13 0 chr17 23458462 23458539 -66046014 - L2 LINE L2 -33 3239 3162 658 218 97 28 chr17 23458546 23458781 -66045772 + MLT1F1 LTR MaLR 208 503 -64 207 0 0 0 chr17 23458781 23458804 -66045749 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 658 218 97 28 chr17 23458804 23458873 -66045680 + MLT1F1 LTR MaLR 503 566 -1 427 253 99 39 chr17 23458939 23459027 -66045526 - MIR SINE MIR -6 256 175 2407 94 0 0 chr17 23459027 23459324 -66045229 + AluY SINE Alu 1 297 -14 427 253 99 39 chr17 23459324 23459417 -66045136 - MIR SINE MIR -87 175 64 1971 154 29 61 chr17 23459530 23459907 -66044646 - MLT1A1 LTR MaLR 0 365 1 1075 191 86 120 chr17 23460042 23460378 -66044175 + MLT1G LTR MaLR 3 313 -277 1903 85 4 0 chr17 23460500 23460736 -66043817 + AluSq SINE Alu 66 302 -11 475 219 25 34 chr17 23460736 23460855 -66043698 + L1ME1 LINE L1 6047 6164 -2 1926 151 0 46 chr17 23460856 23461181 -66043372 + AluJo SINE Alu 2 311 -1 1129 230 29 89 chr17 23461614 23462125 -66042428 - MLT1G3 LTR MaLR 0 595 5 2131 119 0 7 chr17 23462251 23462545 -66042008 - AluSx SINE Alu -20 292 1 906 256 120 3 chr17 23462891 23463199 -66041354 + LTR16C LTR ERVL 146 489 -2 2129 136 118 20 chr17 23463284 23463674 -66040879 - MSTA LTR MaLR 0 428 1 647 283 97 90 chr17 23463747 23464182 -66040371 + L2 LINE L2 2812 3249 -23 1674 64 0 86 chr17 23464263 23464496 -66040057 + AluSq SINE Alu 18 230 -83 684 160 84 0 chr17 23464597 23464728 -66039825 + MSTA LTR MaLR 286 427 -1 235 246 18 0 chr17 23464754 23464811 -66039742 - MLT1G1 LTR MaLR -537 58 1 1277 254 150 13 chr17 23464844 23465297 -66039256 + LTR33A LTR ERVL 9 523 0 2263 204 107 6 chr17 23465613 23466099 -66038454 + MLT1F LTR MaLR 1 535 -7 22 0 0 0 chr17 23466242 23466264 -66038289 + AT_rich Low_complexity Low_complexity 1 22 0 934 153 0 0 chr17 23466361 23466492 -66038061 + FLAM_A SINE Alu 1 131 -2 462 274 44 38 chr17 23466954 23467327 -66037226 + L1ME LINE L1 5255 5668 -453 256 186 382 0 chr17 23467344 23467446 -66037107 - L2 LINE L2 -3 3310 3170 806 176 138 0 chr17 23467646 23467805 -66036748 + REP3 LTR ERV 3 183 -379 1935 155 10 52 chr17 23467811 23468211 -66036342 - MLT1B LTR MaLR -6 384 2 1660 199 25 53 chr17 23468211 23468486 -66036067 + REP3 LTR ERV 178 440 -122 2296 123 0 0 chr17 23468486 23468795 -66035758 - AluSx SINE Alu -3 309 1 1660 199 25 53 chr17 23468795 23468915 -66035638 + REP3 LTR ERV 440 562 0 1707 111 0 0 chr17 23469568 23469793 -66034760 - AluY SINE Alu -86 225 1 257 340 64 43 chr17 23469853 23469994 -66034559 + L2 LINE L2 3098 3241 -31 2420 149 55 73 chr17 23470001 23470255 -66034298 + L1MC2 LINE L1 5782 6039 -305 2115 100 7 4 chr17 23470255 23470563 -66033990 - AluSc SINE Alu 0 309 1 2420 149 55 73 chr17 23470563 23470870 -66033683 + L1MC2 LINE L1 6039 6334 -10 207 0 0 0 chr17 23470896 23470919 -66033634 + (TG)n Simple_repeat Simple_repeat 2 24 0 264 30 0 0 chr17 23470935 23470968 -66033585 + (GA)n Simple_repeat Simple_repeat 2 34 0 1204 189 19 5 chr17 23471098 23471310 -66033243 + AluJb SINE Alu 86 300 -12 2241 105 0 0 chr17 23471680 23471966 -66032587 + AluSx SINE Alu 11 296 -16 354 246 123 23 chr17 23472503 23472633 -66031920 + L3b LINE CR1 1150 1292 -291 960 246 69 58 chr17 23472636 23473084 -66031469 - LTR16A1 LTR ERVL 0 457 5 895 231 10 26 chr17 23473414 23473609 -66030944 - MIR SINE MIR -35 227 36 217 278 0 19 chr17 23473732 23473786 -66030767 - MER5A DNA MER1_type -6 183 131 430 189 31 49 chr17 23473827 23473944 -66030609 + MIR SINE MIR 34 148 -61 748 133 0 0 chr17 23473946 23474051 -66030502 + FLAM_C SINE Alu 3 107 -36 1404 87 0 0 chr17 23474152 23474325 -66030228 - AluSc SINE Alu -136 173 1 4655 247 90 53 chr17 23474373 23474488 -66030065 - HAL1 LINE L1 -520 1987 1878 2065 97 55 17 chr17 23474488 23474778 -66029775 - AluSx SINE Alu -11 301 1 4655 247 90 53 chr17 23474778 23475225 -66029328 - HAL1 LINE L1 -629 1878 1449 1700 194 0 14 chr17 23475225 23475519 -66029034 - AluJo SINE Alu -22 290 1 4655 247 90 53 chr17 23475519 23475698 -66028855 - HAL1 LINE L1 -1058 1449 1278 1966 167 0 0 chr17 23475698 23475997 -66028556 - AluJb SINE Alu -13 299 1 4655 247 90 53 chr17 23475997 23476235 -66028318 - HAL1 LINE L1 -1229 1278 1050 297 0 0 0 chr17 23476235 23476268 -66028285 + (TG)n Simple_repeat Simple_repeat 1 33 0 4655 247 90 53 chr17 23476268 23476479 -66028074 - HAL1 LINE L1 -1457 1050 848 963 228 0 0 chr17 23476479 23476668 -66027885 + MER5A DNA MER1_type 1 189 0 4655 247 90 53 chr17 23476668 23477302 -66027251 - HAL1 LINE L1 -1659 848 82 2253 78 0 7 chr17 23477302 23477596 -66026957 + AluY SINE Alu 1 292 -19 4655 247 90 53 chr17 23477596 23477678 -66026875 - HAL1 LINE L1 -2425 82 5 2344 59 0 74 chr17 23478079 23478403 -66026150 + AluY SINE Alu 1 300 -11 986 141 4 137 chr17 23481301 23481423 -66023130 + MLT1B LTR MaLR 1 138 -252 2304 103 0 3 chr17 23481423 23481723 -66022830 + AluSq SINE Alu 1 299 -14 986 141 4 137 chr17 23481723 23481845 -66022708 + MLT1B LTR MaLR 138 210 -180 2257 108 26 0 chr17 23481845 23482150 -66022403 + AluSq SINE Alu 1 313 0 986 141 4 137 chr17 23482150 23482167 -66022386 + MLT1B LTR MaLR 210 228 -162 296 71 0 0 chr17 23482151 23482193 -66022360 - MADE1 DNA Mariner -37 43 2 * 1948 150 3 23 chr17 23482474 23482781 -66021772 + AluJb SINE Alu 5 305 -7 563 223 23 46 chr17 23482922 23483097 -66021456 - MLT2E LTR ERVL 0 628 458 1107 246 46 4 chr17 23483161 23483442 -66021111 - MLT2E LTR ERVL -326 302 10 231 125 0 0 chr17 23483725 23483757 -66020796 + MLT1G1 LTR MaLR 1 32 -563 904 179 55 55 chr17 23483757 23483975 -66020578 + MLT1B LTR MaLR 1 218 -172 1553 136 0 30 chr17 23484144 23484379 -66020174 - AluSx SINE Alu -84 228 1 2219 107 0 0 chr17 23484462 23484767 -66019786 - AluSc SINE Alu 0 305 1 1255 103 11 27 chr17 23484770 23484955 -66019598 - AluSg/x SINE Alu -11 301 120 1707 164 66 0 chr17 23484993 23485279 -66019274 - AluJb SINE Alu -7 305 1 2003 157 0 3 chr17 23485541 23485841 -66018712 + AluJo SINE Alu 1 299 -13 1074 145 30 15 chr17 23485842 23486042 -66018511 - L1MB5 LINE L1 -10 6164 5962 2633 160 28 2 chr17 23486061 23486531 -66018022 - L1MB3 LINE L1 -2 6181 5700 2638 50 0 0 chr17 23486704 23487004 -66017549 - AluY SINE Alu -11 300 1 2172 114 14 0 chr17 23487006 23487303 -66017250 - AluSx SINE Alu -11 301 1 826 157 0 8 chr17 23487418 23487552 -66017001 - FLAM_A SINE Alu 0 133 1 401 134 15 0 chr17 23488710 23488777 -66015776 - MLT1H1 LTR MaLR 0 555 488 279 79 0 0 chr17 23488811 23488849 -66015704 + (T)n Simple_repeat Simple_repeat 1 38 0 225 162 0 0 chr17 23488949 23488986 -66015567 - Alu SINE Alu -265 37 1 241 296 83 9 chr17 23488991 23489099 -66015454 - Charlie8 DNA MER1_type -2301 116 1 783 169 8 0 chr17 23489135 23489265 -66015288 - FLAM_C SINE Alu 0 133 3 2244 124 3 3 chr17 23489349 23489655 -66014898 - AluSx SINE Alu -6 306 1 1615 145 46 86 chr17 23489888 23490213 -66014340 - AluJo SINE Alu 0 312 1 1826 163 0 67 chr17 23490219 23490415 -66014138 - AluJb SINE Alu 0 312 145 2369 106 6 3 chr17 23490415 23490726 -66013827 - AluSx SINE Alu 0 312 1 1826 163 0 67 chr17 23490726 23490860 -66013693 - AluJb SINE Alu -167 145 4 355 248 26 60 chr17 23491508 23491625 -66012928 - MIR SINE MIR -1 261 149 499 289 113 4 chr17 23492047 23492286 -66012267 - L1ME4a LINE L1 0 6121 5857 1539 185 30 27 chr17 23492330 23492627 -66011926 + AluJo SINE Alu 1 298 -14 291 54 0 0 chr17 23492955 23492992 -66011561 + (TG)n Simple_repeat Simple_repeat 2 38 0 2558 64 0 13 chr17 23493371 23493684 -66010869 + AluY SINE Alu 1 309 -2 336 203 54 0 chr17 23493771 23493845 -66010708 + MIR SINE MIR 41 118 -90 208 293 35 0 chr17 23493862 23493920 -66010633 + L2 LINE L2 3201 3260 -12 464 186 20 20 chr17 23494091 23494193 -66010360 - U13 snRNA snRNA -2 102 1 235 294 0 0 chr17 23494974 23495025 -66009528 - MIR3 SINE MIR -8 200 150 261 255 105 6 chr17 23495190 23495331 -66009222 + MIR3 SINE MIR 54 176 -32 * 1071 215 33 16 chr17 23495269 23495511 -66009042 - MIR SINE MIR -15 247 2 249 175 0 53 chr17 23495511 23495557 -66008996 + L3 LINE CR1 1509 1551 -26 723 176 25 35 chr17 23496651 23496850 -66007703 + LTR37B LTR ERV1 272 468 0 484 207 240 40 chr17 23497246 23497396 -66007157 - MER5A DNA MER1_type -1 188 9 510 258 11 59 chr17 23497545 23497731 -66006822 - MIR SINE MIR -6 256 80 4016 85 3 38 chr17 23498022 23498497 -66006056 - MER41A LTR ERV1 0 554 101 2692 48 0 0 chr17 23498497 23498806 -66005747 + AluY SINE Alu 1 309 -2 4016 85 3 38 chr17 23498806 23498904 -66005649 - MER41A LTR ERV1 -453 101 1 360 257 71 64 chr17 23499950 23500090 -66004463 + MIR3 SINE MIR 6 146 -62 511 47 0 0 chr17 23500611 23500675 -66003878 - MLT1A1 LTR MaLR -28 337 274 743 32 11 0 chr17 23500989 23501083 -66003470 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 946 262 58 92 chr17 23501083 23501435 -66003118 + L2 LINE L2 2690 3052 -261 2519 76 0 0 chr17 23501435 23501739 -66002814 - AluY SINE Alu -7 304 1 946 262 58 92 chr17 23501739 23501750 -66002803 + L2 LINE L2 3052 3062 -251 2300 95 0 0 chr17 23501750 23502058 -66002495 - AluSx SINE Alu 0 308 1 946 262 58 92 chr17 23502058 23502344 -66002209 + L2 LINE L2 3062 3312 -1 528 285 145 1 chr17 23503716 23503902 -66000651 - MIR SINE MIR -10 252 42 180 250 9 121 chr17 23503976 23504092 -66000461 + MIR SINE MIR 109 211 -51 263 250 67 0 chr17 23504339 23504399 -66000154 - MER91C DNA MER1_type -38 102 39 24 0 0 0 chr17 23504643 23504667 -65999886 + GC_rich Low_complexity Low_complexity 1 24 0 234 314 85 8 chr17 23505911 23506029 -65998524 + MIR SINE MIR 96 222 -40 642 210 80 84 chr17 23506115 23506187 -65998366 - MLT1J LTR MaLR -3 508 437 271 0 0 0 chr17 23506187 23506217 -65998336 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 2228 88 0 34 chr17 23506217 23506512 -65998041 - AluSx SINE Alu -1 314 1 642 210 80 84 chr17 23506512 23506724 -65997829 - MLT1J LTR MaLR -72 439 224 1069 276 97 66 chr17 23507267 23507506 -65997047 + MER115 DNA AcHobo 20 250 -443 1773 189 25 11 chr17 23507506 23507865 -65996688 - MLT1A1 LTR MaLR 0 365 2 1069 276 97 66 chr17 23507865 23508213 -65996340 + MER115 DNA AcHobo 250 625 -68 296 175 10 134 chr17 23508352 23508374 -65996179 + Zaphod DNA AcHobo 3947 3970 -61 2296 97 3 7 chr17 23508374 23508674 -65995879 + AluSq SINE Alu 1 299 -14 296 175 10 134 chr17 23508674 23508748 -65995805 + Zaphod DNA AcHobo 3970 4031 0 2586 59 7 0 chr17 23508978 23509282 -65995271 + AluY SINE Alu 1 306 -5 1521 114 0 18 chr17 23509820 23510039 -65994514 - AluSg/x SINE Alu -15 297 83 2249 171 7 23 chr17 23510140 23510567 -65993986 + MLT1F LTR MaLR 100 519 -23 2068 195 39 17 chr17 23510566 23511027 -65993526 + MER110 LTR ERV1 21 491 0 * 2365 67 0 3 chr17 23511066 23511372 -65993181 - AluY SINE Alu 0 305 1 1396 186 84 7 chr17 23511374 23511649 -65992904 - AluJo SINE Alu -16 296 1 616 106 0 0 chr17 23511677 23511762 -65992791 - AluJ/FLAM SINE Alu -226 86 2 1015 157 56 0 chr17 23511811 23511989 -65992564 - MER3 DNA MER1_type -21 188 1 2378 85 0 0 chr17 23513698 23513991 -65990562 - AluSg SINE Alu -17 293 1 427 217 83 33 chr17 23514048 23514168 -65990385 - MER5B DNA MER1_type -48 130 5 911 119 0 8 chr17 23514244 23514378 -65990175 - FLAM_C SINE Alu 0 133 1 419 257 9 9 chr17 23514401 23514506 -65990047 + MIR SINE MIR 47 151 -111 921 176 43 32 chr17 23514517 23514704 -65989849 - MER5A DNA MER1_type 0 189 1 2129 110 40 20 chr17 23515261 23515561 -65988992 - AluSx SINE Alu -6 306 1 882 141 115 45 chr17 23515718 23515874 -65988679 + AluJb SINE Alu 9 175 -137 364 262 27 47 chr17 23516320 23516469 -65988084 + L2 LINE L2 3131 3276 -37 524 136 0 10 chr17 23516478 23516581 -65987972 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 1587 201 44 34 chr17 23516634 23516818 -65987735 - Charlie1 DNA MER1_type 0 2761 2580 1911 182 115 43 chr17 23516818 23517324 -65987229 + MLT1F LTR MaLR 1 542 0 1587 201 44 34 chr17 23517324 23517615 -65986938 - Charlie1 DNA MER1_type -181 2580 1 2326 81 0 71 chr17 23519737 23519924 -65984629 - AluSx SINE Alu -12 300 144 2033 107 29 0 chr17 23519924 23520196 -65984357 - AluSx SINE Alu -32 280 1 2326 81 0 71 chr17 23520196 23520331 -65984222 - AluSx SINE Alu -168 144 1 2562 66 0 0 chr17 23520719 23521024 -65983529 + AluY SINE Alu 1 305 -6 299 274 166 17 chr17 23521097 23521272 -65983281 - LTR67 LTR ERVL -5 552 352 360 0 0 0 chr17 23521433 23521473 -65983080 + (CA)n Simple_repeat Simple_repeat 2 41 0 423 284 164 0 chr17 23521655 23521771 -65982782 - MIR SINE MIR -120 142 8 205 272 114 26 chr17 23521903 23522017 -65982536 - MIR3 SINE MIR -82 126 3 809 266 78 78 chr17 23522134 23522648 -65981905 + LTR67 LTR ERVL 44 557 0 307 263 12 12 chr17 23523948 23524028 -65980525 + MIR SINE MIR 20 99 -163 228 164 0 110 chr17 23524064 23524137 -65980416 + MLT1G1 LTR MaLR 98 162 -387 665 194 185 58 chr17 23524187 23524517 -65980036 + MLT1G1 LTR MaLR 224 595 0 211 293 158 0 chr17 23524523 23524605 -65979948 + MIR SINE MIR 106 200 -62 531 301 82 6 chr17 23524899 23525082 -65979471 + MIR SINE MIR 49 245 -17 469 263 144 16 chr17 23525248 23525441 -65979112 + LTR16A LTR ERVL 25 242 -208 2273 164 62 31 chr17 23525441 23525923 -65978630 + MLT1D LTR MaLR 1 497 -8 652 188 122 35 chr17 23525937 23526134 -65978419 + LTR16A LTR ERVL 237 450 0 321 218 0 13 chr17 23526163 23526241 -65978312 - L1MC5 LINE L1 -46 7915 7839 2465 74 0 13 chr17 23526274 23526585 -65977968 - AluSp SINE Alu -6 307 1 393 320 7 20 chr17 23526995 23527145 -65977408 - MIR SINE MIR -34 228 81 1422 233 63 20 chr17 23527150 23527592 -65976961 - MLT1C LTR MaLR -1 466 6 1252 246 13 7 chr17 23527700 23528001 -65976552 + MLT1G LTR MaLR 1 303 -287 1264 107 17 6 chr17 23528004 23528182 -65976371 - AluSg/x SINE Alu -2 308 129 1124 175 106 22 chr17 23528187 23528461 -65976092 + MLT1G LTR MaLR 294 590 0 182 33 67 0 chr17 23528550 23528580 -65975973 + A-rich Low_complexity Low_complexity 3 34 0 453 215 74 54 chr17 23529504 23529829 -65974724 - MER34 LTR ERV1 0 542 265 943 174 56 0 chr17 23529862 23530040 -65974513 - MER34C LTR ERV1 -397 188 1 963 295 63 25 chr17 23530957 23531042 -65973511 - LTR16C LTR ERVL -79 412 332 2500 131 13 8 chr17 23531042 23531430 -65973123 + MLT1B LTR MaLR 1 390 0 963 295 63 25 chr17 23531430 23531741 -65972812 - LTR16C LTR ERVL -159 332 1 311 250 169 0 chr17 23532123 23532247 -65972306 - LTR67 LTR ERVL -4 553 409 864 208 147 94 chr17 23532751 23533093 -65971460 - MLT1G LTR MaLR -8 582 198 2360 91 0 0 chr17 23533093 23533408 -65971145 + AluSq SINE Alu 1 315 0 864 208 147 94 chr17 23533408 23533617 -65970936 - MLT1G LTR MaLR -392 198 1 954 96 0 15 chr17 23533626 23533762 -65970791 + FLAM_C SINE Alu 9 142 -1 435 266 73 51 chr17 23534891 23535033 -65969520 - MIR SINE MIR -21 241 93 2492 139 56 15 chr17 23535033 23535442 -65969111 - MSTB LTR MaLR 0 426 1 435 266 73 51 chr17 23535442 23535476 -65969077 - MIR SINE MIR -169 93 61 1652 144 70 0 chr17 23535574 23535844 -65968709 + AluJo SINE Alu 1 289 -23 271 307 30 0 chr17 23535866 23535967 -65968586 - MLT1J LTR MaLR -101 410 307 523 98 43 22 chr17 23535968 23536060 -65968493 - MER53 DNA DNA 0 189 96 1331 188 5 5 chr17 23536076 23536299 -65968254 - AluJb SINE Alu -13 299 77 37 52 0 0 chr17 23536307 23536365 -65968188 + AT_rich Low_complexity Low_complexity 1 58 0 836 224 142 29 chr17 23536386 23536667 -65967886 - MLT1J LTR MaLR -198 313 1 710 294 62 11 chr17 23536884 23537159 -65967394 + LTR16A1 LTR ERVL 138 426 -31 259 286 45 36 chr17 23537417 23537529 -65967024 - LTR33A LTR ERVL 0 523 411 259 256 26 77 chr17 23537707 23537748 -65966805 - MLT2E LTR ERVL -486 142 100 3395 188 17 21 chr17 23537748 23538141 -65966412 - MER82 DNA MER2_type 0 653 263 2270 114 0 22 chr17 23538141 23538457 -65966096 + AluSx SINE Alu 1 309 -3 3395 188 17 21 chr17 23538457 23538716 -65965837 - MER82 DNA MER2_type -390 263 4 259 256 26 77 chr17 23538716 23538791 -65965762 - MLT2E LTR ERVL -528 100 32 2108 267 75 29 chr17 23538903 23539963 -65964590 - L1MCb LINE L1 -4327 2795 1485 441 233 51 51 chr17 23539982 23540158 -65964395 - L1MCb LINE L1 -6228 195 20 998 224 77 112 chr17 23540391 23540953 -65963600 + MLT1H LTR MaLR 1 542 -7 861 244 0 15 chr17 23540954 23541151 -65963402 + MLT1J LTR MaLR 5 198 -313 2506 77 0 0 chr17 23542220 23542519 -65962034 + AluSx SINE Alu 1 299 -13 1024 50 0 0 chr17 23542780 23542900 -65961653 - AluY SINE Alu -190 121 2 585 300 45 0 chr17 23542901 23543101 -65961452 - L2 LINE L2 -1881 1433 1225 462 299 32 13 chr17 23543357 23543511 -65961042 - MIR SINE MIR -2 260 104 390 279 27 0 chr17 23543736 23543847 -65960706 + MER81 DNA DNA 1 114 0 1991 144 0 19 chr17 23543906 23544218 -65960335 - AluSq SINE Alu -7 306 1 281 167 0 0 chr17 23544382 23544430 -65960123 - MLT2B1 LTR ERVL 0 520 473 836 114 0 16 chr17 23544440 23544563 -65959990 - MLT2B1 LTR ERVL -242 278 158 1924 148 148 5 chr17 23544563 23544936 -65959617 - MSTB LTR MaLR 0 426 1 937 140 32 6 chr17 23544936 23545093 -65959460 - MLT2B1 LTR ERVL -358 162 2 413 306 35 29 chr17 23545236 23545406 -65959147 - MIR SINE MIR -47 215 45 415 240 43 70 chr17 23545993 23546212 -65958341 - LTR16A1 LTR ERVL -115 342 155 219 277 169 0 chr17 23546421 23546486 -65958067 + L2 LINE L2 3155 3230 -42 533 193 118 0 chr17 23547045 23547164 -65957389 + FLAM_C SINE Alu 1 133 0 2514 183 127 33 chr17 23547379 23548078 -65956475 - LTR50 LTR ERVL -24 771 7 2073 107 11 0 chr17 23548078 23548402 -65956151 + AluSx SINE Alu 1 327 0 2411 109 0 0 chr17 23549127 23549439 -65955114 + AluSx SINE Alu 1 312 0 234 41 41 41 chr17 23549462 23549511 -65955042 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 294 276 95 57 chr17 23549521 23549626 -65954927 - L2 LINE L2 -38 3234 3126 437 118 0 0 chr17 23549749 23549817 -65954736 - MER53 DNA DNA 0 189 122 960 187 176 80 chr17 23550153 23550488 -65954065 + MLT2D LTR ERVL 2 479 -41 314 182 0 13 chr17 23550494 23550571 -65953982 + (TA)n Simple_repeat Simple_repeat 1 76 0 201 39 0 0 chr17 23550582 23550608 -65953945 + (TG)n Simple_repeat Simple_repeat 2 27 0 251 48 0 48 chr17 23550608 23550645 -65953908 + MLT2C1 LTR ERVL 355 389 -8 1901 166 27 27 chr17 23551523 23551897 -65952656 + MLT1A2 LTR MaLR 1 374 0 422 219 15 22 chr17 23551990 23552007 -65952546 - L1MA10 LINE L1 -2 6332 6316 1375 188 25 100 chr17 23552007 23552438 -65952115 - L1ME2 LINE L1 -9 6155 5757 777 291 83 28 chr17 23552493 23553330 -65951223 - L1ME3 LINE L1 -279 5883 5004 1057 48 0 0 chr17 23553407 23553532 -65951021 - AluY SINE Alu -11 300 176 2616 63 0 0 chr17 23553643 23553946 -65950607 - AluSg SINE Alu -7 303 1 249 298 141 53 chr17 23553946 23554245 -65950308 + L1ME2 LINE L1 3912 4236 -1910 769 233 81 91 chr17 23554248 23554865 -65949688 + L1ME2 LINE L1 4342 4952 -1194 1628 118 0 0 chr17 23554874 23555116 -65949437 + AluSq SINE Alu 63 304 0 1765 216 120 21 chr17 23555118 23555562 -65948991 + L1ME2 LINE L1 5280 5803 -367 2013 117 17 0 chr17 23555562 23555853 -65948700 + AluSx SINE Alu 1 296 -16 1765 216 120 21 chr17 23555853 23556023 -65948530 + L1ME2 LINE L1 5803 5955 -215 277 167 0 0 chr17 23556209 23556251 -65948302 - FLAM_A SINE Alu -15 118 77 230 242 15 30 chr17 23556262 23556328 -65948225 + L1ME2 LINE L1 6052 6116 -48 273 159 232 0 chr17 23556343 23556412 -65948141 - L1MB8 LINE L1 -1 6177 6093 1174 123 18 112 chr17 23556422 23556698 -65947855 - L1MB4 LINE L1 0 6180 5931 916 196 0 0 chr17 23559079 23559242 -65945311 - L1MB4 LINE L1 -237 5943 5781 331 229 29 0 chr17 23559242 23559312 -65945241 - MER2 DNA MER2_type 0 345 274 704 189 16 16 chr17 23559317 23559444 -65945109 + FLAM_A SINE Alu 7 133 -9 1227 102 87 15 chr17 23559484 23559680 -65944873 - MER2 DNA MER2_type -135 210 1 941 166 14 51 chr17 23559680 23559904 -65944649 - L1MB4 LINE L1 -398 5782 5548 824 209 121 47 chr17 23559912 23559971 -65944582 - L2 LINE L2 -1480 1834 1781 608 146 182 0 chr17 23559971 23560081 -65944472 - FLAM_A SINE Alu -3 130 1 824 209 121 47 chr17 23560081 23560318 -65944235 - L2 LINE L2 -1533 1781 1516 241 297 0 0 chr17 23560443 23560507 -65944046 - MIR3 SINE MIR -31 177 114 269 156 0 0 chr17 23560600 23560645 -65943908 + (TG)n Simple_repeat Simple_repeat 1 45 0 884 151 5 113 chr17 23560800 23561012 -65943541 - MER53 DNA DNA 0 189 1 224 370 56 6 chr17 23561548 23561710 -65942843 + MIR SINE MIR 64 233 -29 1877 103 88 0 chr17 23561881 23562153 -65942400 + AluSq SINE Alu 1 296 -17 2720 184 90 52 chr17 23562453 23563073 -65941480 + MLT1E1 LTR MaLR 3 646 -8 2135 127 0 6 chr17 23563226 23563540 -65941013 - AluSx SINE Alu 0 312 1 267 314 54 72 chr17 23563835 23564058 -65940495 + MLT1L LTR MaLR 1 219 -369 * 366 303 60 22 chr17 23564050 23564235 -65940318 + MLT1L LTR MaLR 424 615 0 323 226 141 63 chr17 23564267 23564321 -65940232 - MLT1J LTR MaLR -24 487 439 186 43 0 0 chr17 23564321 23564344 -65940209 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 323 226 141 63 chr17 23564344 23564610 -65939943 - MLT1J LTR MaLR -72 439 111 231 247 41 27 chr17 23564553 23564626 -65939927 - LTR67 LTR ERVL -385 172 99 * 184 366 10 0 chr17 23564812 23564913 -65939640 + L2 LINE L2 2213 2314 -1000 498 196 0 0 chr17 23565465 23565567 -65938986 + GA-rich Low_complexity Low_complexity 3 104 0 392 271 37 0 chr17 23565634 23565741 -65938812 + MIR3 SINE MIR 97 207 -1 2278 86 7 0 chr17 23565998 23566290 -65938263 + AluSg SINE Alu 1 294 -16 665 306 28 7 chr17 23566314 23566598 -65937955 - L1M4 LINE L1 -1095 5051 4762 332 216 93 55 chr17 23566627 23566863 -65937690 - L1M4 LINE L1 -1724 4422 4178 2295 133 109 122 chr17 23566876 23567344 -65937209 + MLT2D LTR ERVL 3 464 0 415 265 63 97 chr17 23567345 23567487 -65937066 - L1M4 LINE L1 -1977 4169 4024 1897 160 0 0 chr17 23567487 23567787 -65936766 - AluSx SINE Alu -12 300 1 415 265 63 97 chr17 23567787 23568033 -65936520 - L1M4 LINE L1 -2122 4024 3771 2374 68 0 0 chr17 23568033 23568326 -65936227 - AluY SINE Alu -18 293 1 415 265 63 97 chr17 23568326 23568455 -65936098 - L1M4 LINE L1 -2375 3771 3639 1704 124 70 24 chr17 23568455 23568753 -65935800 - AluSx SINE Alu 0 312 1 415 265 63 97 chr17 23568753 23568796 -65935757 - L1M4 LINE L1 -2507 3639 3596 3336 64 2 9 chr17 23568796 23569232 -65935321 + L1PA8 LINE L1 5738 6170 -2 415 265 63 97 chr17 23569232 23569354 -65935199 - L1M4 LINE L1 -2550 3596 3471 2285 64 10 0 chr17 23569354 23569651 -65934902 - AluY SINE Alu -11 300 1 415 265 63 97 chr17 23569651 23569784 -65934769 - L1M4 LINE L1 -2675 3471 3335 2408 58 3 0 chr17 23569784 23570078 -65934475 - AluY SINE Alu -16 295 1 415 265 63 97 chr17 23570078 23570213 -65934340 - L1M4 LINE L1 -2811 3335 3142 1669 260 29 14 chr17 23571312 23571755 -65932798 - LTR16A LTR ERVL 0 450 1 757 330 41 34 chr17 23571879 23572410 -65932143 - HERV16 LTR ERVL -381 5383 4849 2326 60 0 32 chr17 23572423 23572738 -65931815 - AluY SINE Alu -6 305 1 2133 119 3 0 chr17 23572791 23573101 -65931452 - AluSx SINE Alu -1 311 1 3437 207 39 13 chr17 23573295 23574147 -65930406 - L1M4 LINE L1 -989 5393 4520 1838 150 0 29 chr17 23574165 23574244 -65930309 - AluJo SINE Alu -8 304 224 7977 116 50 10 chr17 23574244 23575472 -65929081 + MER52C LTR ERV1 1 1278 0 1838 150 0 29 chr17 23575472 23575705 -65928848 - AluJo SINE Alu -88 224 1 764 211 0 32 chr17 23575735 23575891 -65928662 - MLT1D LTR MaLR -42 463 313 3069 217 42 10 chr17 23575993 23576777 -65927776 - L1M4 LINE L1 -2028 4354 3546 4860 83 0 29 chr17 23576797 23577493 -65927060 + L1PB1 LINE L1 5475 6150 -1 485 271 0 0 chr17 23577502 23577620 -65926933 + L1M4 LINE L1 3775 3892 -2254 501 212 20 0 chr17 23577625 23577776 -65926777 - L1M4 LINE L1 -2852 3530 3377 692 326 27 30 chr17 23577785 23578145 -65926408 - HERV16 LTR ERVL -1593 3694 3162 1266 281 92 19 chr17 23578152 23578398 -65926155 - HERV16 LTR ERVL -3546 1450 1223 1808 172 30 60 chr17 23578398 23578800 -65925753 - MLT1B LTR MaLR 0 390 1 1266 281 92 19 chr17 23578800 23579020 -65925533 - HERV16 LTR ERVL -3773 1223 950 1936 186 49 55 chr17 23579030 23579499 -65925054 - MLT1C LTR MaLR 0 467 2 785 275 73 29 chr17 23579501 23579774 -65924779 - HERV16 LTR ERVL -4053 943 659 2049 198 37 28 chr17 23579774 23580225 -65924328 - L1PA15-16 LINE L1 -3805 2577 2132 1794 170 0 13 chr17 23580225 23580531 -65924022 - AluJo SINE Alu -10 302 1 2049 198 37 28 chr17 23580531 23580722 -65923831 - L1PA15-16 LINE L1 -4250 2132 1944 2061 134 0 3 chr17 23580722 23581029 -65923524 - AluSx SINE Alu -6 306 1 2049 198 37 28 chr17 23581029 23581240 -65923313 - L1PA15-16 LINE L1 -4438 1944 1646 2039 182 96 15 chr17 23581277 23581672 -65922881 - L1M4 LINE L1 -5656 886 460 1097 184 19 10 chr17 23581671 23581878 -65922675 - L1M4 LINE L1 -6331 211 3 * 964 295 7 18 chr17 23581878 23582156 -65922397 - HERV16 LTR ERVL -4335 661 387 278 232 14 14 chr17 23582156 23582225 -65922328 + HERV16 LTR ERVL 171 239 -4757 929 126 14 34 chr17 23582233 23582440 -65922113 + L1MA7 LINE L1 6087 6289 -2 463 247 52 17 chr17 23582765 23582939 -65921614 + L1M4 LINE L1 2316 2495 -3651 228 111 0 0 chr17 23582981 23583017 -65921536 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 739 236 7 0 chr17 23583019 23583163 -65921390 - FRAM SINE Alu -31 145 1 656 280 40 24 chr17 23583170 23583499 -65921054 + L1M4 LINE L1 2539 2872 -3274 1353 107 51 5 chr17 23583506 23583898 -65920655 - L1PA16 LINE L1 -9 6157 5708 * 1560 255 18 4 chr17 23583897 23584032 -65920521 + L1M4 LINE L1 2913 3045 -3101 2274 66 3 0 chr17 23584032 23584320 -65920233 + AluY SINE Alu 1 289 -22 1560 255 18 4 chr17 23584320 23584694 -65919859 + L1M4 LINE L1 3045 3429 -2717 818 173 0 0 chr17 23584700 23584833 -65919720 + FLAM_C SINE Alu 1 133 -10 856 282 23 80 chr17 23584834 23585358 -65919195 + L1M4 LINE L1 3432 3925 -2221 1712 162 0 0 chr17 23585369 23585677 -65918876 - AluSg SINE Alu -2 308 1 6169 101 13 4 chr17 23585896 23587327 -65917226 - L1PA16 LINE L1 -11 6155 4716 222 37 0 0 chr17 23587494 23587521 -65917032 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 381 258 118 0 chr17 23587521 23587614 -65916939 - L2 LINE L2 -16 3297 3194 201 349 128 20 chr17 23587589 23587738 -65916815 + L2 LINE L2 3101 3265 -7 * 2725 109 33 19 chr17 23587951 23588373 -65916180 - MSTA LTR MaLR 0 428 1 622 307 68 0 chr17 23588626 23588818 -65915735 + MIR SINE MIR 20 224 -38 701 180 35 23 chr17 23588818 23588990 -65915563 + L1MA8 LINE L1 5931 6104 -187 469 179 13 0 chr17 23589074 23589152 -65915401 - Tigger5 DNA MER2_type -2244 79 1 656 229 66 0 chr17 23589159 23589325 -65915228 + L1MA8 LINE L1 6112 6288 -3 2335 143 121 5 chr17 23589337 23589757 -65914796 - MER31A LTR ERV1 -16 469 1 829 161 161 0 chr17 23589757 23589918 -65914635 + MER5A DNA MER1_type 3 189 0 561 192 8 46 chr17 23590016 23590146 -65914407 + MER5B DNA MER1_type 18 142 -36 886 183 39 0 chr17 23590146 23590326 -65914227 - MER5A DNA MER1_type -2 187 1 768 143 30 23 chr17 23590814 23590947 -65913606 - FLAM_C SINE Alu -1 142 9 469 188 119 10 chr17 23591024 23591125 -65913428 + L2 LINE L2 3196 3307 -6 262 327 29 0 chr17 23591309 23591413 -65913140 - L2 LINE L2 -214 3058 2952 357 253 13 0 chr17 23591841 23591920 -65912633 - MIR SINE MIR -70 192 113 493 155 54 70 chr17 23592357 23592486 -65912067 + MIR3 SINE MIR 61 187 -21 2206 115 0 3 chr17 23592640 23592952 -65911601 - AluSx SINE Alu -1 311 1 1506 133 25 4 chr17 23593564 23593805 -65910748 + AluJb SINE Alu 34 279 -33 301 231 123 0 chr17 23594149 23594214 -65910339 + L2 LINE L2 3193 3265 -7 300 263 95 11 chr17 23594224 23594319 -65910234 - MIR SINE MIR -79 183 81 312 306 0 0 chr17 23594485 23594658 -65909895 + (TG)n Simple_repeat Simple_repeat 2 174 0 211 225 0 0 chr17 23594660 23594700 -65909853 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 578 246 3 0 chr17 23594707 23595041 -65909512 + (TG)n Simple_repeat Simple_repeat 1 335 0 1655 192 24 87 chr17 23595324 23595747 -65908806 + MLT2C2 LTR ERVL 1 391 -73 1969 121 0 0 chr17 23595747 23596060 -65908493 - AluSx SINE Alu 0 315 3 1655 192 24 87 chr17 23596060 23596129 -65908424 + MLT2C2 LTR ERVL 391 463 -1 1534 230 16 29 chr17 23596520 23596899 -65907654 - MLT1A2 LTR MaLR 0 374 1 1173 117 99 33 chr17 23597341 23597399 -65907154 - L1MC2 LINE L1 -340 6004 5951 2111 115 0 3 chr17 23597399 23597704 -65906849 - AluSq SINE Alu -9 304 1 1173 117 99 33 chr17 23597704 23597858 -65906695 - L1MC2 LINE L1 -393 5951 5778 420 146 0 104 chr17 23598167 23598224 -65906329 + MER94 DNA DNA 26 72 -62 1999 131 0 0 chr17 23598224 23598540 -65906013 + AluSx SINE Alu 1 316 0 420 146 0 104 chr17 23598540 23598577 -65905976 + MER94 DNA DNA 72 111 -23 423 221 32 11 chr17 23598804 23598899 -65905654 - MLT1J1 LTR MaLR -108 338 242 * 424 216 23 0 chr17 23598893 23598981 -65905572 + MER81 DNA DNA 22 111 -3 814 251 62 41 chr17 23598984 23599227 -65905326 - MLT1J1 LTR MaLR -192 254 7 1728 193 134 43 chr17 23600210 23600650 -65903903 - MLT1D LTR MaLR 0 505 26 517 272 95 0 chr17 23600827 23600985 -65903568 - MIR SINE MIR -70 192 20 786 170 14 20 chr17 23601584 23601731 -65902822 - AluJb SINE Alu -165 147 2 198 0 0 0 chr17 23601792 23601814 -65902739 + (T)n Simple_repeat Simple_repeat 1 22 0 459 253 117 19 chr17 23602042 23602196 -65902357 - MLT1J2 LTR MaLR -22 428 260 403 189 0 0 chr17 23602259 23602349 -65902204 - AluSc SINE Alu -1 308 219 393 315 0 9 chr17 23602370 23602481 -65902072 - MLT1I LTR MaLR -270 139 30 2454 193 27 17 chr17 23602485 23602928 -65901625 + MER82 DNA MER2_type 1 451 -202 5354 149 38 1 chr17 23602928 23603795 -65900758 - MER54A LTR ERVL 0 901 3 2454 193 27 17 chr17 23603795 23603834 -65900719 + MER82 DNA MER2_type 451 488 -165 1089 135 79 0 chr17 23603835 23604013 -65900540 - LTR47A LTR ERVL 0 452 261 756 262 24 0 chr17 23604233 23604397 -65900156 + MER82 DNA MER2_type 485 652 -1 1755 211 89 77 chr17 23604404 23604986 -65899567 - MLT1G1 LTR MaLR -6 589 1 1102 243 94 45 chr17 23605203 23605651 -65898902 + MLT1H LTR MaLR 58 527 -22 1840 152 0 29 chr17 23605924 23606239 -65898314 - AluJo SINE Alu -6 306 1 1957 115 3 16 chr17 23606836 23607141 -65897412 - AluSq SINE Alu -12 301 1 252 196 0 20 chr17 23607157 23607208 -65897345 - MLT1I LTR MaLR 0 409 360 757 209 0 50 chr17 23607334 23607516 -65897037 - MLT1J1 LTR MaLR -253 193 21 1394 235 66 47 chr17 23608299 23608724 -65895829 + MLT2F LTR ERVL 1 433 -230 578 143 0 41 chr17 23608758 23608856 -65895697 + FRAM SINE Alu 68 161 -15 2193 185 26 11 chr17 23608884 23609262 -65895291 + MLT1F1 LTR MaLR 179 562 -5 621 261 39 0 chr17 23609270 23609450 -65895103 + MLT2F LTR ERVL 476 662 -1 296 129 113 32 chr17 23609507 23609569 -65894984 - MER5B DNA MER1_type 0 178 112 2344 81 0 0 chr17 23609570 23609877 -65894676 + AluY SINE Alu 1 307 -4 245 98 24 0 chr17 23609877 23609918 -65894635 + (GA)n Simple_repeat Simple_repeat 1 42 0 649 211 16 0 chr17 23609919 23610047 -65894506 - MER5B DNA MER1_type -48 130 1 194 319 0 0 chr17 23610354 23610401 -65894152 + L3 LINE CR1 1521 1567 -10 * 338 290 46 23 chr17 23610392 23610523 -65894030 + MIR3 SINE MIR 44 177 -31 1355 262 55 8 chr17 23610542 23610924 -65893629 - LTR16A LTR ERVL -21 429 30 2122 158 7 9 chr17 23610934 23611286 -65893267 - MLT1A1 LTR MaLR -11 446 1 2065 109 17 3 chr17 23612179 23612472 -65892081 + AluSx SINE Alu 1 297 -15 190 294 153 0 chr17 23612768 23612853 -65891700 - L2 LINE L2 -31 3241 3144 2228 160 11 6 chr17 23612861 23613224 -65891329 - MLT1A1 LTR MaLR 0 365 1 256 248 15 98 chr17 23614946 23615079 -65889474 - MIR SINE MIR -51 211 90 1744 214 98 37 chr17 23615089 23615571 -65888982 - MLT1J LTR MaLR 0 511 1 917 100 31 8 chr17 23615639 23615769 -65888784 - FLAM_C SINE Alu 0 133 1 2096 71 0 0 chr17 23615836 23616105 -65888448 - AluY SINE Alu -1 310 42 538 333 101 43 chr17 23616135 23616510 -65888043 - L3 LINE CR1 -1 1576 1180 237 222 0 0 chr17 23616857 23616902 -65887651 - MLT1J LTR MaLR -1 510 466 576 230 42 118 chr17 23616917 23617093 -65887460 - MLT1J LTR MaLR -119 496 308 2090 129 0 0 chr17 23617093 23617396 -65887157 - AluSx SINE Alu -8 304 2 576 230 42 118 chr17 23617396 23617528 -65887025 - MLT1J LTR MaLR -307 308 111 246 320 51 0 chr17 23617613 23617691 -65886862 + MIR3 SINE MIR 115 196 -12 2198 98 3 0 chr17 23617739 23618046 -65886507 + AluSq SINE Alu 1 308 -5 672 253 53 16 chr17 23618074 23618264 -65886289 + MIR SINE MIR 46 242 -20 1009 166 0 11 chr17 23619031 23619206 -65885347 + MLT1B LTR MaLR 1 173 -217 1258 141 0 0 chr17 23619206 23619397 -65885156 + AluJo SINE Alu 1 191 -121 236 77 26 0 chr17 23619418 23619457 -65885096 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1311 175 5 0 chr17 23619459 23619682 -65884871 + MLT1B LTR MaLR 167 390 0 3396 153 83 3 chr17 23619867 23620443 -65884110 + LTR26E LTR ERV1 1 622 0 1616 196 58 13 chr17 23620450 23620843 -65883710 - MER69 DNA AcHobo -27 2499 2089 * 2372 223 131 30 chr17 23620842 23620981 -65883572 - MER69 DNA AcHobo -1288 1238 1114 234 0 0 0 chr17 23620981 23621007 -65883546 + (TG)n Simple_repeat Simple_repeat 1 26 0 2372 223 131 30 chr17 23621007 23621567 -65882986 - MER69 DNA AcHobo -1412 1114 468 1098 228 123 9 chr17 23621569 23622067 -65882486 + MLT1G1 LTR MaLR 3 586 -9 534 262 49 43 chr17 23622076 23622240 -65882313 - MER69 DNA AcHobo -2054 472 308 1815 238 65 26 chr17 23622380 23622914 -65881639 - MLT1H1 LTR MaLR 0 555 1 1171 250 73 18 chr17 23623297 23623625 -65880928 - LTR16C LTR ERVL 0 491 146 392 320 129 6 chr17 23624261 23624439 -65880114 + MIR3 SINE MIR 9 208 0 554 128 13 0 chr17 23624581 23624659 -65879894 - Tigger7 DNA MER2_type -3 2484 2406 2356 173 41 3 chr17 23624679 23625066 -65879487 - Tigger7 DNA MER2_type -2085 402 1 287 185 0 0 chr17 23625445 23625470 -65879083 - MSTA LTR MaLR 0 428 404 2726 80 11 0 chr17 23625470 23625819 -65878734 - THE1A LTR MaLR -2 353 1 287 185 0 0 chr17 23625819 23625847 -65878706 - MSTA LTR MaLR -23 405 375 2324 124 59 8 chr17 23625875 23626246 -65878307 - MSTA LTR MaLR -38 390 1 419 270 217 17 chr17 23626357 23626587 -65877966 - MLT1L LTR MaLR -10 605 330 267 231 106 39 chr17 23626748 23626852 -65877701 - MLT1L LTR MaLR -356 259 149 200 296 0 0 chr17 23627841 23627895 -65876658 + GA-rich Low_complexity Low_complexity 2 55 0 2690 251 45 21 chr17 23627915 23628691 -65875862 + L1ME3A LINE L1 5371 6165 -5 501 155 62 21 chr17 23628902 23628999 -65875554 - MER69 DNA AcHobo -1125 101 1 531 220 47 33 chr17 23628999 23629149 -65875404 - MIR SINE MIR -5 257 106 1463 128 90 45 chr17 23629304 23629593 -65874960 - AluJo SINE Alu -10 302 1 215 309 0 0 chr17 23629944 23629999 -65874554 - L2 LINE L2 -10 3262 3208 423 297 100 17 chr17 23630087 23630287 -65874266 - MIR SINE MIR -37 225 15 1702 227 58 13 chr17 23630564 23631027 -65873526 - L1M4 LINE L1 -1721 4425 3942 547 218 44 92 chr17 23631482 23631563 -65872990 - L1MC4 LINE L1 -2 8040 7957 1153 198 40 125 chr17 23631563 23631962 -65872591 + MLT1A1 LTR MaLR 1 365 0 547 218 44 92 chr17 23631962 23632023 -65872530 - L1MC4 LINE L1 -85 7957 7895 387 165 13 0 chr17 23632023 23632102 -65872451 - MER116 DNA Mariner 0 80 1 547 218 44 92 chr17 23632102 23632251 -65872302 - L1MC4 LINE L1 -147 7895 7762 3156 179 7 11 chr17 23632261 23632798 -65871755 + MLT1F LTR MaLR 1 535 -7 597 222 9 0 chr17 23633049 23633157 -65871396 - MIR SINE MIR -153 109 1 580 218 123 74 chr17 23633605 23633673 -65870880 + LTR16C LTR ERVL 3 66 -425 1347 123 15 0 chr17 23633673 23633877 -65870676 + MER3 DNA MER1_type 3 209 0 580 218 123 74 chr17 23633877 23634241 -65870312 + LTR16C LTR ERVL 66 491 0 1541 185 3 23 chr17 23634899 23635207 -65869346 - AluJb SINE Alu -5 307 6 255 350 48 19 chr17 23636047 23636150 -65868403 - MIR SINE MIR -61 147 42 1584 198 91 39 chr17 23636281 23636690 -65867863 - LTR16C LTR ERVL 0 491 62 585 342 119 32 chr17 23637481 23637852 -65866701 - L2 LINE L2 -6 3266 2864 690 147 92 65 chr17 23638213 23638299 -65866254 + MER53 DNA DNA 1 83 -106 2101 102 7 0 chr17 23638299 23638594 -65865959 + AluSx SINE Alu 1 297 -15 690 147 92 65 chr17 23638594 23638691 -65865862 + MER53 DNA DNA 83 189 0 294 315 0 0 chr17 23638696 23638785 -65865768 + MLT1K LTR MaLR 144 232 -356 232 232 37 37 chr17 23638972 23639054 -65865499 + MLT1K LTR MaLR 468 549 -39 554 103 0 35 chr17 23639403 23639490 -65865063 - AluJo SINE Alu -8 304 221 1172 176 0 9 chr17 23639591 23639807 -65864746 - AluJo SINE Alu -98 214 1 312 206 11 98 chr17 23639962 23640054 -65864499 - MIR3 SINE MIR -17 191 108 441 289 177 10 chr17 23641078 23641299 -65863254 - MIR SINE MIR -6 256 3 1710 269 92 12 chr17 23641443 23641945 -65862608 - MLT1H1 LTR MaLR -2 553 12 1753 172 0 3 chr17 23642167 23642464 -65862089 - AluJo SINE Alu -16 296 1 1051 233 85 89 chr17 23643123 23643629 -65860924 - MLT1H1 LTR MaLR -11 544 41 1293 188 31 27 chr17 23643776 23644032 -65860521 - MIR SINE MIR 0 262 6 250 320 20 30 chr17 23644051 23644108 -65860445 - L2 LINE L2 -33 3239 3182 1383 255 45 55 chr17 23644108 23644622 -65859931 + MLT1J LTR MaLR 1 509 -2 250 320 20 30 chr17 23644622 23644664 -65859889 - L2 LINE L2 -90 3182 3141 5248 162 19 3 chr17 23646112 23647479 -65857074 - L1MB5 LINE L1 -8 6166 4778 5994 127 26 40 chr17 23647490 23647652 -65856901 - L1MC1 LINE L1 -88 6245 6082 902 133 0 22 chr17 23647652 23647787 -65856766 - FLAM_C SINE Alu 0 133 2 5994 127 26 40 chr17 23647787 23648694 -65855859 - L1MC1 LINE L1 -251 6082 5185 482 237 0 0 chr17 23648684 23648781 -65855772 - L1MC1 LINE L1 -1771 4375 4279 * 1957 120 0 33 chr17 23648842 23649143 -65855410 + AluSx SINE Alu 5 295 -17 570 243 269 36 chr17 23649143 23649448 -65855105 - MLT1K LTR MaLR -50 538 163 204 125 0 0 chr17 23649590 23649622 -65854931 + L2 LINE L2 3282 3313 0 2261 69 7 0 chr17 23649787 23650076 -65854477 - AluY SINE Alu -20 291 1 1740 224 89 14 chr17 23650585 23650956 -65853597 + MLT1G1 LTR MaLR 1 399 -196 296 164 180 0 chr17 23650968 23651029 -65853524 + MLT1F LTR MaLR 3 74 -468 259 282 129 0 chr17 23651195 23651280 -65853273 + MLT1F1 LTR MaLR 71 166 -401 1355 192 143 54 chr17 23651359 23651708 -65852845 + MLT1F1 LTR MaLR 188 567 0 650 253 13 26 chr17 23651723 23651877 -65852676 + MLT1G1 LTR MaLR 438 589 -6 1944 144 0 26 chr17 23651901 23652213 -65852340 + AluSx SINE Alu 1 304 -8 1425 157 5 0 chr17 23652288 23652511 -65852042 - MLT1B LTR MaLR 0 390 167 2114 80 0 0 chr17 23652536 23652800 -65851753 + THE1A LTR MaLR 1 264 -91 212 288 144 27 chr17 23653791 23653902 -65850651 + MIR SINE MIR 23 146 -62 332 264 91 77 chr17 23653954 23654000 -65850553 - MLT1L LTR MaLR -56 559 515 2011 128 0 25 chr17 23654000 23654319 -65850234 + AluJo SINE Alu 1 311 -1 332 264 91 77 chr17 23654319 23654673 -65849880 - MLT1L LTR MaLR -100 515 120 936 108 0 0 chr17 23654688 23654846 -65849707 + AluSg/x SINE Alu 153 310 0 180 309 12 48 chr17 23655579 23655663 -65848890 - MIR SINE MIR -77 185 105 724 209 7 0 chr17 23656188 23656341 -65848212 - MER74A LTR ERVL -124 434 281 407 277 173 14 chr17 23656525 23656745 -65847808 + LTR16A LTR ERVL 12 266 -184 2442 179 18 7 chr17 23656745 23657198 -65847355 - LTR32 LTR ERVL 0 471 14 477 256 158 6 chr17 23657216 23657380 -65847173 + LTR16A LTR ERVL 262 450 0 1926 182 81 74 chr17 23658544 23659080 -65845473 - MER74A LTR ERVL 0 558 16 1818 97 0 0 chr17 23659080 23659308 -65845245 + AluSg/x SINE Alu 77 304 -6 1926 182 81 74 chr17 23659308 23659325 -65845228 - MER74A LTR ERVL -542 16 1 408 247 60 23 chr17 23659405 23659646 -65844907 + L1MC4a LINE L1 5695 5821 -357 438 258 38 16 chr17 23659819 23660005 -65844548 - LTR16B LTR ERVL -144 320 131 223 313 179 0 chr17 23660657 23660769 -65843784 - L2 LINE L2 -216 3056 2925 2507 90 0 0 chr17 23660770 23661080 -65843473 + AluSq SINE Alu 1 310 -3 356 264 72 45 chr17 23661265 23661475 -65843078 - MLT1K LTR MaLR -229 386 183 360 250 190 67 chr17 23662297 23662545 -65842008 + MER5C DNA MER1_type 5 294 -30 207 0 0 0 chr17 23662545 23662568 -65841985 + (TA)n Simple_repeat Simple_repeat 1 23 0 360 250 190 67 chr17 23662568 23662603 -65841950 + MER5C DNA MER1_type 294 323 -1 361 298 57 117 chr17 23662703 23663072 -65841481 + L2 LINE L2 2918 3264 -8 2149 137 7 0 chr17 23663109 23663408 -65841145 + AluJb SINE Alu 1 301 -11 2056 109 43 31 chr17 23663413 23663762 -65840791 - L1MB3 LINE L1 -19 6164 5812 431 242 129 62 chr17 23664058 23664255 -65840298 + MIR SINE MIR 1 214 -48 1323 170 21 118 chr17 23664460 23664790 -65839763 + AluY SINE Alu 1 298 -13 658 249 55 67 chr17 23665020 23665438 -65839115 + LTR33 LTR ERVL 8 420 -101 288 208 13 13 chr17 23666034 23666111 -65838442 + MLT1K LTR MaLR 183 259 -329 203 278 0 0 chr17 23666175 23666229 -65838324 - L2 LINE L2 -34 3279 3226 664 241 37 7 chr17 23667796 23668140 -65836413 - MLT1J2 LTR MaLR 0 450 61 1509 165 0 21 chr17 23668282 23668525 -65836028 + AluJb SINE Alu 1 238 -74 1120 142 6 11 chr17 23668547 23668730 -65835823 + MLT1C LTR MaLR 283 464 -3 481 292 72 74 chr17 23668773 23668971 -65835582 - HAL1 LINE L1 -273 2234 2037 2004 120 39 11 chr17 23668971 23669254 -65835299 - AluSx SINE Alu -21 291 1 481 292 72 74 chr17 23669254 23669569 -65834984 - HAL1 LINE L1 -470 2037 1722 249 192 39 44 chr17 23669570 23669648 -65834905 - MLT1F1 LTR MaLR -2 585 496 1001 235 77 81 chr17 23669659 23670203 -65834350 - HAL1 LINE L1 -1965 542 1 11302 82 7 5 chr17 23670984 23672517 -65832036 + THE1A-int LTR MaLR 45 1580 0 2391 73 117 0 chr17 23672519 23672835 -65831718 + THE1A LTR MaLR 3 355 0 518 237 0 0 chr17 23672835 23672928 -65831625 - FLAM_A SINE Alu -49 93 1 785 208 22 17 chr17 23672928 23673106 -65831447 - MLT1B LTR MaLR -211 179 1 1008 207 0 0 chr17 23673174 23673343 -65831210 + FAM SINE Alu 2 170 -5 201 269 58 19 chr17 23674144 23674196 -65830357 - L2 LINE L2 -9 3304 3251 2239 117 7 0 chr17 23674488 23674787 -65829766 - AluSx SINE Alu -11 301 1 2276 108 0 0 chr17 23676234 23676530 -65828023 - AluJb SINE Alu -16 296 1 348 272 78 0 chr17 23676674 23676777 -65827776 - MIR SINE MIR -8 254 144 1469 186 35 22 chr17 23676781 23677233 -65827320 + MLT2B1 LTR ERVL 5 501 -19 282 96 0 137 chr17 23677245 23677318 -65827235 + MLT2B3 LTR ERVL 458 554 0 9844 181 33 12 chr17 23677319 23678983 -65825570 + ERVL-B3 LTR ERVL 2 1708 -4056 3900 74 10 10 chr17 23678983 23679496 -65825057 - LTR10D LTR ERV1 0 513 1 9844 181 33 12 chr17 23679496 23679673 -65824880 + ERVL-B3 LTR ERVL 1708 1880 -3884 243 109 43 22 chr17 23679673 23679719 -65824834 + MLT2B1 LTR ERVL 474 520 0 284 189 311 19 chr17 23679719 23679825 -65824728 - MIR SINE MIR -114 148 12 301 290 203 14 chr17 23680076 23680214 -65824339 + MIR3 SINE MIR 36 199 -9 1217 125 111 0 chr17 23680320 23680536 -65824017 - MSTB1 LTR MaLR -1 431 192 1092 126 0 0 chr17 23680537 23680734 -65823819 - AluSq SINE Alu 0 336 140 310 50 0 0 chr17 23680734 23680774 -65823779 - MSTB1 LTR MaLR -386 40 1 402 287 116 0 chr17 23680802 23680966 -65823587 + MIR SINE MIR 52 234 -28 221 368 0 43 chr17 23681371 23681556 -65822997 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 1018 194 0 0 chr17 23681637 23681807 -65822746 + FRAM SINE Alu 1 170 -6 3332 200 46 47 chr17 23682020 23682808 -65821745 + L1MD2 LINE L1 4505 5292 -1067 2267 107 13 7 chr17 23682808 23683116 -65821437 + AluSg SINE Alu 1 310 0 3332 200 46 47 chr17 23683116 23683945 -65820608 + L1MD2 LINE L1 5292 6141 -218 240 35 0 0 chr17 23684005 23684034 -65820519 + (CA)n Simple_repeat Simple_repeat 1 29 0 494 272 122 9 chr17 23684664 23684877 -65819676 + L1ME4a LINE L1 5789 6025 -96 593 221 74 42 chr17 23686209 23686399 -65818154 - MLT1H1 LTR MaLR -350 205 10 400 277 36 0 chr17 23686847 23686959 -65817594 + MIR3 SINE MIR 87 202 -6 1454 236 102 63 chr17 23687618 23688185 -65816368 + MLT1G1 LTR MaLR 2 590 -5 517 294 27 38 chr17 23688217 23688401 -65816152 + MER5A DNA MER1_type 8 189 0 753 237 56 103 chr17 23688597 23689006 -65815547 + MLT1J LTR MaLR 122 511 0 406 284 153 27 chr17 23689416 23689599 -65814954 - MIR SINE MIR -29 233 28 1151 309 18 15 chr17 23690632 23691023 -65813530 + MLT1I LTR MaLR 1 392 -17 1422 116 50 12 chr17 23691244 23691503 -65813050 - L1MA4 LINE L1 -7 6293 6025 2371 130 0 12 chr17 23691505 23691843 -65812710 + MER1B DNA MER1_type 4 337 0 1990 140 0 0 chr17 23692862 23693141 -65811412 - AluJo SINE Alu -28 284 6 582 255 62 6 chr17 23693299 23693460 -65811093 - MIR SINE MIR -41 221 52 572 257 81 88 chr17 23693557 23693749 -65810804 + L2 LINE L2 2555 2747 -525 2140 118 7 23 chr17 23693749 23694054 -65810499 - AluSx SINE Alu -12 300 1 572 257 81 88 chr17 23694054 23694329 -65810224 + L2 LINE L2 2747 3019 -253 301 70 0 0 chr17 23694399 23694442 -65810111 - MADE1 DNA Mariner -37 43 1 2255 116 0 10 chr17 23694826 23695136 -65809417 - AluSx SINE Alu -5 307 1 249 209 0 0 chr17 23695305 23695348 -65809205 - L2 LINE L2 -17 3255 3213 1656 177 115 100 chr17 23695367 23695617 -65808936 - MLT1F1 LTR MaLR -2 565 320 2683 125 29 10 chr17 23695617 23696033 -65808520 - MSTB LTR MaLR -2 424 1 1656 177 115 100 chr17 23696033 23696314 -65808239 - MLT1F1 LTR MaLR -247 320 1 222 309 111 0 chr17 23696322 23696403 -65808150 - MIR SINE MIR -70 192 103 2451 140 12 31 chr17 23696403 23696766 -65807787 + MLT2C2 LTR ERVL 1 357 -107 2028 141 0 45 chr17 23696766 23697078 -65807475 + AluSx SINE Alu 1 298 -14 2451 140 12 31 chr17 23697078 23697127 -65807426 + MLT2C2 LTR ERVL 357 405 -59 246 62 0 0 chr17 23697131 23697163 -65807390 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 1275 241 100 39 chr17 23697166 23697677 -65806876 + MER34 LTR ERV1 1 542 0 210 37 0 0 chr17 23697681 23697708 -65806845 + (CA)n Simple_repeat Simple_repeat 2 28 0 284 119 0 0 chr17 23697709 23697751 -65806802 + MLT2C2 LTR ERVL 356 397 0 196 261 22 0 chr17 23697753 23697799 -65806754 - MIR SINE MIR -157 105 59 1572 233 128 41 chr17 23697859 23698392 -65806161 + MLT1G1 LTR MaLR 1 579 -16 447 321 172 17 chr17 23698393 23698461 -65806092 - L2 LINE L2 -43 3270 3214 1952 174 49 3 chr17 23698461 23698806 -65805747 - MLT1A1 LTR MaLR -4 361 1 447 321 172 17 chr17 23698806 23699033 -65805520 - L2 LINE L2 -99 3214 2929 1580 149 54 0 chr17 23699157 23699398 -65805155 - AluJb SINE Alu -15 297 44 1700 179 0 43 chr17 23699398 23699721 -65804832 - AluJb SINE Alu -2 310 1 1607 217 32 11 chr17 23700613 23700986 -65803567 + L1ME3 LINE L1 5754 6134 -28 501 250 68 8 chr17 23700986 23701118 -65803435 + FLAM_A SINE Alu 2 141 -1 1626 204 6 12 chr17 23701326 23701654 -65802899 - MLT1A1 LTR MaLR 0 365 40 197 184 0 0 chr17 23802105 23802143 -65702410 + MIR SINE MIR 80 117 -145 522 233 136 17 chr17 23802832 23803008 -65701545 - MIR SINE MIR -26 236 40 263 312 11 11 chr17 23803816 23803909 -65700644 + (CGTG)n Simple_repeat Simple_repeat 2 94 0 381 93 0 0 chr17 23803926 23803980 -65700573 + (TG)n Simple_repeat Simple_repeat 1 54 0 201 39 0 0 chr17 23804091 23804117 -65700436 + (CGCGG)n Simple_repeat Simple_repeat 1 26 0 585 294 82 5 chr17 23804477 23804661 -65699892 - MIR SINE MIR -1 261 64 254 250 91 11 chr17 23805099 23805187 -65699366 - MIR3 SINE MIR -52 156 62 347 324 94 0 chr17 23805659 23805829 -65698724 + LTR16C LTR ERVL 37 222 -269 530 208 113 0 chr17 23805861 23806020 -65698533 + LTR16C LTR ERVL 281 457 -34 232 157 0 48 chr17 23806109 23806192 -65698361 + CT-rich Low_complexity Low_complexity 1 79 0 255 347 0 10 chr17 23806399 23806497 -65698056 + (TGGA)n Simple_repeat Simple_repeat 2 98 0 333 230 19 14 chr17 23806510 23806729 -65697824 + (TGGA)n Simple_repeat Simple_repeat 1 220 0 456 313 23 0 chr17 23807135 23807263 -65697290 - MIR SINE MIR 0 262 132 854 177 9 0 chr17 23807381 23807623 -65696930 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 1194 70 0 0 chr17 23807819 23807975 -65696578 + AluY SINE Alu 156 311 0 2292 44 4 0 chr17 23807984 23808259 -65696294 + AluY SINE Alu 35 310 -1 346 331 25 38 chr17 23808269 23808426 -65696127 + MIR SINE MIR 18 172 -90 258 362 9 9 chr17 23809448 23809553 -65695000 - MIR SINE MIR 0 262 158 322 297 83 28 chr17 23809723 23809877 -65694676 + MIR3 SINE MIR 1 167 -62 194 328 15 0 chr17 23809946 23810013 -65694540 - MIR3 SINE MIR -53 155 88 204 302 70 31 chr17 23811084 23811213 -65693340 - L2 LINE L2 -6 3307 3174 186 43 0 0 chr17 23811836 23811859 -65692694 + (TCC)n Simple_repeat Simple_repeat 1 23 0 242 240 192 34 chr17 23811928 23812074 -65692479 + L2 LINE L2 2233 2401 -913 253 172 35 0 chr17 23813448 23813505 -65691048 - MIR SINE MIR -62 146 98 229 196 161 0 chr17 23814309 23814365 -65690188 + MIR SINE MIR 107 171 -91 261 289 53 0 chr17 23814370 23814446 -65690107 + Tigger3(Golem) DNA MER2_type 3 82 -2947 * 1750 144 10 0 chr17 23814444 23814749 -65689804 + Tigger3(Golem) DNA MER2_type 2721 3028 -1 204 238 0 0 chr17 23814768 23814810 -65689743 + MIR SINE MIR 221 262 0 210 310 42 49 chr17 23815723 23815865 -65688688 + L2 LINE L2 2849 2989 -324 766 279 105 3 chr17 23817228 23817561 -65686992 + MLT1K LTR MaLR 103 469 -119 186 314 0 0 chr17 23819378 23819429 -65685124 + MIR SINE MIR 100 150 -112 212 351 27 0 chr17 23819446 23819520 -65685033 + L2 LINE L2 3238 3313 0 250 260 0 0 chr17 23820138 23820188 -65684365 + L2 LINE L2 3258 3307 -6 207 100 0 0 chr17 23820281 23820311 -65684242 + (CA)n Simple_repeat Simple_repeat 2 31 0 837 243 6 6 chr17 23820666 23820839 -65683714 + MIR SINE MIR 20 192 -70 566 348 97 13 chr17 23820960 23821351 -65683202 + Charlie4a DNA MER1_type 26 449 -59 274 224 93 19 chr17 23822125 23822239 -65682314 - MIR SINE MIR -64 144 25 203 219 0 0 chr17 23822717 23822758 -65681795 + L3 LINE CR1 1423 1463 -114 570 260 82 82 chr17 23823668 23823999 -65680554 + L2 LINE L2 2812 3142 -171 462 301 58 22 chr17 23824439 23824678 -65679875 + MIR SINE MIR 13 262 0 283 280 0 0 chr17 23824697 23824772 -65679781 + (TCCA)n Simple_repeat Simple_repeat 1 75 0 752 190 0 22 chr17 23824784 23824968 -65679585 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 659 223 0 11 chr17 23825005 23825180 -65679373 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 209 210 16 0 chr17 23825211 23825273 -65679280 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 764 195 8 0 chr17 23825285 23825541 -65679012 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 739 178 11 0 chr17 23825557 23825731 -65678822 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 688 200 12 0 chr17 23825752 23825917 -65678636 + (TCCA)n Simple_repeat Simple_repeat 3 169 0 225 339 0 0 chr17 23825919 23825984 -65678569 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 729 259 202 5 chr17 23826302 23826803 -65677750 - L2 LINE L2 -2 3311 2696 305 294 157 7 chr17 23826856 23827009 -65677544 + L2 LINE L2 3092 3267 -5 224 313 16 0 chr17 23830205 23830269 -65674284 + (CAG)n Simple_repeat Simple_repeat 3 67 0 288 261 14 0 chr17 23831271 23831340 -65673213 + L2 LINE L2 3200 3269 -3 1158 267 99 15 chr17 23832508 23833000 -65671553 + L2 LINE L2 2776 3310 -3 308 262 75 19 chr17 23833053 23833160 -65671393 - MIR SINE MIR -99 163 51 197 247 135 34 chr17 23834889 23834978 -65669575 - L2 LINE L2 -60 3253 3156 2558 45 0 10 chr17 23835861 23836173 -65668380 - AluY SINE Alu -2 309 1 193 200 0 0 chr17 23836986 23837021 -65667532 + MIR SINE MIR 117 151 -111 767 215 80 16 chr17 23837168 23837419 -65667134 - MLT1C LTR MaLR 0 467 201 736 178 178 7 chr17 23837445 23837597 -65666956 - AluJo SINE Alu -18 294 117 2165 121 0 0 chr17 23837597 23837902 -65666651 - AluSc SINE Alu -2 307 3 225 125 42 21 chr17 23837903 23837951 -65666602 - MLT1C LTR MaLR -218 172 124 270 258 26 53 chr17 23839046 23839197 -65665356 + (TCTG)n Simple_repeat Simple_repeat 2 148 0 1083 316 83 16 chr17 23839443 23840019 -65664534 - L1ME1 LINE L1 -9 6157 5543 202 200 0 55 chr17 23840279 23840334 -65664219 + (CCCCAG)n Simple_repeat Simple_repeat 2 53 0 272 154 123 31 chr17 23840499 23840564 -65663989 - MIR SINE MIR -105 157 87 392 230 9 0 chr17 23841207 23841320 -65663233 + Charlie4 DNA MER1_type 1780 1893 -68 373 225 18 45 chr17 23841573 23841684 -65662869 - L2 LINE L2 -15 3298 3191 306 359 44 0 chr17 23841816 23841975 -65662578 + L2 LINE L2 2914 3079 -193 228 242 242 0 chr17 23842483 23842578 -65661975 - MIR SINE MIR -61 147 30 408 302 171 16 chr17 23842871 23843393 -65661160 - L2 LINE L2 -14 3258 2657 193 308 125 14 chr17 23843619 23843766 -65660787 + MIR3 SINE MIR 1 160 -63 392 325 43 27 chr17 23844063 23844251 -65660302 - MIR SINE MIR -25 237 47 312 27 0 0 chr17 23845864 23845901 -65658652 + (CA)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr17 23846119 23846139 -65658414 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 220 279 266 28 chr17 23850032 23850490 -65654063 + L2 LINE L2 2361 2927 -387 2054 112 0 6 chr17 23850592 23850904 -65653649 - MER9 LTR ERVK -201 310 1 237 328 123 8 chr17 23852687 23852809 -65651744 - MIR SINE MIR -60 202 67 2927 127 4 15 chr17 23853353 23853811 -65650742 - L1PA16 LINE L1 -9 6157 5705 191 319 52 52 chr17 23854049 23854165 -65650388 - L2 LINE L2 -15 3298 3183 1097 222 36 64 chr17 23856199 23856463 -65648090 + MLT1E1 LTR MaLR 2 255 -399 1734 127 79 7 chr17 23856463 23856754 -65647799 + AluJb SINE Alu 1 312 0 1097 222 36 64 chr17 23856754 23856849 -65647704 + MLT1E1 LTR MaLR 255 351 -303 207 345 138 0 chr17 23857111 23857198 -65647355 - MIR SINE MIR -8 254 156 21 36 0 0 chr17 23858533 23858561 -65645992 + AT_rich Low_complexity Low_complexity 1 28 0 327 274 0 62 chr17 23860884 23861063 -65643490 + C-rich Low_complexity Low_complexity 5 172 0 304 262 11 78 chr17 23861124 23861315 -65643238 + C-rich Low_complexity Low_complexity 1 178 0 280 207 0 24 chr17 23862182 23862264 -65642289 + (CGGGG)n Simple_repeat Simple_repeat 4 83 0 3641 57 4 2 chr17 23862354 23862811 -65641742 - L1PA6 LINE L1 -5 6149 5692 1014 155 39 6 chr17 23864089 23864270 -65640283 + AluJo SINE Alu 81 267 -45 368 162 10 30 chr17 23864272 23864371 -65640182 + G-rich Low_complexity Low_complexity 2 98 0 232 286 0 0 chr17 23864387 23864450 -65640103 + L1ME LINE L1 322 384 -5686 330 216 68 11 chr17 23864936 23865048 -65639505 - L1MD3 LINE L1 0 8041 7897 1019 324 56 12 chr17 23865395 23865895 -65638658 - MER90 LTR ERV1 -23 591 70 821 156 0 22 chr17 23867194 23867329 -65637224 + FLAM_C SINE Alu 2 133 0 26 30 0 0 chr17 23867383 23867416 -65637137 + AT_rich Low_complexity Low_complexity 1 33 0 1698 169 13 26 chr17 23867606 23867919 -65636634 - AluJo SINE Alu -2 310 2 26 0 0 0 chr17 23868207 23868233 -65636320 + AT_rich Low_complexity Low_complexity 1 26 0 466 202 10 0 chr17 23871610 23871709 -65632844 - MER65C LTR ERV1 0 461 362 273 196 0 0 chr17 23872700 23872756 -65631797 + (CA)n Simple_repeat Simple_repeat 1 56 0 327 290 32 0 chr17 23873072 23873165 -65631388 + MIR SINE MIR 122 217 -45 410 283 233 18 chr17 23873563 23873962 -65630591 + L2 LINE L2 2829 3313 0 251 174 0 0 chr17 23874865 23874911 -65629642 - ORSL DNA AcHobo -20 255 210 897 198 5 0 chr17 23875217 23875663 -65628890 + (TGGA)n Simple_repeat Simple_repeat 1 448 0 234 128 0 0 chr17 23875701 23875740 -65628813 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 244 293 37 0 chr17 23875764 23875846 -65628707 + (TGGA)n Simple_repeat Simple_repeat 2 86 0 1326 56 0 0 chr17 23875903 23876097 -65628456 - AluY SINE Alu 0 314 121 312 224 53 0 chr17 23876101 23876177 -65628376 - ORSL DNA AcHobo -195 80 1 203 264 0 0 chr17 23876270 23876323 -65628230 + L2 LINE L2 2918 2970 -302 294 274 21 11 chr17 23876788 23876883 -65627670 + MIR SINE MIR 58 153 -109 261 0 0 0 chr17 23877340 23877369 -65627184 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 565 300 90 44 chr17 23877370 23877737 -65626816 - L2 LINE L2 -20 3293 2910 277 294 46 18 chr17 23877796 23877905 -65626648 - L2 LINE L2 -497 2817 2706 2182 111 3 0 chr17 23877917 23878223 -65626330 - AluSg SINE Alu -2 308 2 246 193 0 0 chr17 23878231 23878288 -65626265 - L1MB5 LINE L1 0 6174 6118 775 188 0 0 chr17 23878289 23878406 -65626147 + FLAM_C SINE Alu 2 118 -25 930 139 111 0 chr17 23878421 23878593 -65625960 - L1MB5 LINE L1 -43 6131 5941 519 206 92 0 chr17 23878610 23878741 -65625812 + L2 LINE L2 3171 3313 0 886 311 34 6 chr17 23878751 23879076 -65625477 - L1MB5 LINE L1 -228 5946 5613 219 256 69 84 chr17 23880265 23880468 -65624085 + L2 LINE L2 2858 3057 -215 1659 152 0 37 chr17 23880970 23881292 -65623261 + AluJo SINE Alu 3 312 0 215 264 11 23 chr17 23881977 23882064 -65622489 + (TATG)n Simple_repeat Simple_repeat 4 89 0 268 284 4 8 chr17 23882065 23882327 -65622226 + (TG)n Simple_repeat Simple_repeat 1 261 0 486 276 118 8 chr17 23882944 23883274 -65621279 - LTR33A LTR ERVL -3 792 152 284 238 0 0 chr17 23883764 23883827 -65620726 - MIR SINE MIR -110 152 90 575 249 270 18 chr17 23884370 23884700 -65619853 + L2 LINE L2 2898 3310 -3 259 315 36 0 chr17 23884787 23884898 -65619655 + MIR SINE MIR 36 150 -58 213 323 125 0 chr17 23885595 23885691 -65618862 + MIR SINE MIR 29 136 -72 1675 240 83 36 chr17 23885888 23886377 -65618176 + L1MB5 LINE L1 5621 6138 -36 2361 85 0 0 chr17 23886377 23886684 -65617869 + AluSx SINE Alu 1 307 -5 1675 240 83 36 chr17 23886684 23886723 -65617830 + L1MB5 LINE L1 6138 6174 0 506 284 90 35 chr17 23887286 23887487 -65617066 + MIR SINE MIR 40 251 -11 446 275 0 0 chr17 23887719 23887886 -65616667 + (CA)n Simple_repeat Simple_repeat 1 167 0 419 309 15 0 chr17 23888529 23888665 -65615888 + MIR SINE MIR 47 184 -78 481 315 21 0 chr17 23889213 23889356 -65615197 - MIR SINE MIR -22 240 95 423 280 217 6 chr17 23889497 23889672 -65614881 + MIR SINE MIR 39 250 -12 594 293 37 33 chr17 23890072 23890287 -65614266 + MIR SINE MIR 8 223 -39 489 261 114 23 chr17 23890345 23890521 -65614032 + MIR SINE MIR 37 228 -34 2136 108 3 0 chr17 23891250 23891546 -65613007 - AluSq SINE Alu -16 297 1 672 258 110 12 chr17 23891785 23892168 -65612385 + MLT1H LTR MaLR 15 549 0 1978 100 4 0 chr17 23892273 23892544 -65612009 + AluSg SINE Alu 1 272 -38 2293 74 0 7 chr17 23892589 23892885 -65611668 + AluSx SINE Alu 1 294 -18 248 262 37 47 chr17 23893235 23893342 -65611211 + L2 LINE L2 2899 3004 -268 213 338 60 26 chr17 23893416 23893567 -65610986 + L2 LINE L2 3028 3183 -89 247 284 63 47 chr17 23893825 23893952 -65610601 + MIR SINE MIR 33 161 -101 668 201 45 13 chr17 23894063 23894217 -65610336 - MIR SINE MIR -81 181 23 459 0 0 0 chr17 23894985 23895036 -65609517 + (CA)n Simple_repeat Simple_repeat 1 51 0 673 286 106 55 chr17 23895068 23895168 -65609385 + MLT1L LTR MaLR 4 97 -414 753 274 41 0 chr17 23895168 23895365 -65609188 - MER3 DNA MER1_type 0 209 5 673 286 106 55 chr17 23895365 23895797 -65608756 + MLT1L LTR MaLR 97 492 -19 390 340 160 20 chr17 23895835 23896141 -65608412 + L2 LINE L2 2924 3272 0 2292 137 78 12 chr17 23896348 23896756 -65607797 + L1MB3 LINE L1 5747 6181 -2 2668 188 115 28 chr17 23896779 23897387 -65607166 + MER21B LTR ERV1 1 661 -202 4526 128 5 82 chr17 23897387 23898235 -65606318 - LTR39 LTR ERV1 0 783 2 823 139 191 6 chr17 23898237 23898410 -65606143 + MER21B LTR ERV1 659 863 0 2210 75 0 0 chr17 23898862 23899187 -65605366 + AluY SINE Alu 1 325 0 395 271 118 26 chr17 23899448 23899677 -65604876 + L1MC5 LINE L1 5530 5779 -342 2378 74 3 0 chr17 23899715 23900025 -65604528 + AluY SINE Alu 1 311 0 777 293 25 41 chr17 23900035 23900397 -65604156 + L1PB1 LINE L1 5479 5834 -317 * 2068 207 152 26 chr17 23900072 23900652 -65603901 + L1ME1 LINE L1 5509 6161 -5 2237 78 0 0 chr17 23900701 23901011 -65603542 + AluSq SINE Alu 1 310 0 472 294 38 16 chr17 23901057 23901241 -65603312 - MLT1J2 LTR MaLR 0 450 263 1902 138 37 0 chr17 23902384 23902681 -65601872 + AluJb SINE Alu 1 308 -4 253 282 0 42 chr17 23902743 23902814 -65601739 + polypurine Low_complexity Low_complexity 3 70 0 256 314 100 76 chr17 23903237 23904117 -65600436 + HAL1b LINE L1 8 908 -440 1562 167 37 4 chr17 23904505 23904779 -65599774 + AluJo SINE Alu 11 292 -20 196 42 0 0 chr17 23904779 23904803 -65599750 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 291 283 65 0 chr17 23904808 23904946 -65599607 + L1MC5 LINE L1 5846 5992 -1816 1921 248 51 6 chr17 23904947 23905469 -65599084 - MLT1H1 LTR MaLR 0 555 12 2233 253 106 86 chr17 23905517 23905693 -65598860 + L1MC5 LINE L1 6041 6212 -1749 2221 103 3 0 chr17 23905693 23905985 -65598568 - AluSg SINE Alu -17 293 1 2233 253 106 86 chr17 23905985 23906349 -65598204 + L1MC5 LINE L1 6212 6567 -1394 1845 173 7 3 chr17 23906349 23906656 -65597897 + AluSx SINE Alu 1 308 -4 2233 253 106 86 chr17 23906656 23907961 -65596592 + L1MC5 LINE L1 6567 7917 -44 337 280 62 83 chr17 23908165 23908358 -65596195 + L1ME LINE L1 5528 5716 -405 349 218 13 0 chr17 23909112 23909190 -65595363 + MLT1J LTR MaLR 98 176 -335 233 220 51 0 chr17 23909270 23909329 -65595224 + MLT1J LTR MaLR 413 474 -37 2133 77 3 7 chr17 23909331 23909642 -65594911 - AluSx SINE Alu 0 310 1 611 252 81 13 chr17 23909733 23909967 -65594586 - LTR16A1 LTR ERVL 0 457 208 246 270 0 14 chr17 23910439 23910513 -65594040 - MIR SINE MIR -76 132 60 466 212 71 0 chr17 23910779 23910892 -65593661 - LTR16C LTR ERVL -74 417 297 410 294 149 0 chr17 23911380 23911574 -65592979 - MIR SINE MIR -9 253 31 253 344 74 0 chr17 23911659 23911781 -65592772 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23911816 23911853 -65592700 + AT_rich Low_complexity Low_complexity 1 37 0 190 294 29 15 chr17 23912032 23912100 -65592453 + L2 LINE L2 3224 3292 -21 191 240 80 48 chr17 23912431 23912556 -65591997 + MIR3 SINE MIR 3 131 -77 278 305 29 0 chr17 23912802 23912907 -65591646 + L3 LINE CR1 1427 1534 -43 1179 179 54 68 chr17 23913006 23913057 -65591496 - MSTD LTR MaLR 0 396 346 1687 160 48 10 chr17 23913057 23913351 -65591202 - AluJo SINE Alu -7 305 1 1179 179 54 68 chr17 23913351 23913652 -65590901 - MSTD LTR MaLR -50 346 49 2207 111 0 9 chr17 23914497 23914812 -65589741 - AluSx SINE Alu 0 312 1 195 341 73 0 chr17 23915679 23915761 -65588792 - L2 LINE L2 0 3313 3226 515 268 61 48 chr17 23915770 23916001 -65588552 - L2 LINE L2 -193 3120 2887 325 243 91 44 chr17 23916570 23916723 -65587830 + MIR SINE MIR 31 189 -19 27 0 0 0 chr17 23917071 23917098 -65587455 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr17 23917161 23917189 -65587364 + AT_rich Low_complexity Low_complexity 1 28 0 498 234 154 37 chr17 23918290 23918504 -65586049 + L2 LINE L2 2815 3053 -219 2242 70 7 20 chr17 23919363 23919662 -65584891 - AluSg SINE Alu -15 295 1 421 356 31 22 chr17 23919700 23919922 -65584631 - L1M4 LINE L1 -3472 2674 2451 284 240 13 0 chr17 23920432 23920507 -65584046 + Charlie8 DNA MER1_type 97 172 -2245 405 0 0 0 chr17 23920643 23920688 -65583865 + (CA)n Simple_repeat Simple_repeat 2 46 0 2132 121 3 13 chr17 23921986 23922301 -65582252 + AluSp SINE Alu 1 312 -1 22 35 0 0 chr17 23922350 23922379 -65582174 + AT_rich Low_complexity Low_complexity 1 29 0 2004 118 31 0 chr17 23922391 23922680 -65581873 + AluSg SINE Alu 1 298 -12 39 50 0 0 chr17 23922705 23922765 -65581788 + AT_rich Low_complexity Low_complexity 1 60 0 796 255 166 9 chr17 23922946 23923382 -65581171 + MLT1H1 LTR MaLR 7 555 0 22 35 0 0 chr17 23923673 23923702 -65580851 + AT_rich Low_complexity Low_complexity 1 29 0 2230 103 7 0 chr17 23923846 23924138 -65580415 + AluSx SINE Alu 1 294 -18 2238 109 3 0 chr17 23924138 23924449 -65580104 + AluSx SINE Alu 1 312 0 1235 119 0 0 chr17 23924449 23924625 -65579928 + AluSg/x SINE Alu 133 308 -2 182 257 195 0 chr17 23924697 23924810 -65579743 + L2 LINE L2 2813 2947 -367 1900 232 102 43 chr17 23924951 23925211 -65579342 + MER21B LTR ERV1 17 260 -603 1839 168 0 0 chr17 23925211 23925497 -65579056 + AluJo SINE Alu 5 290 -22 1900 232 102 43 chr17 23925497 23925510 -65579043 + MER21B LTR ERV1 260 271 -592 2037 127 14 0 chr17 23925510 23925801 -65578752 + AluSx SINE Alu 1 295 -17 1900 232 102 43 chr17 23925801 23926219 -65578334 + MER21B LTR ERV1 271 750 -113 390 276 103 37 chr17 23928596 23928810 -65575743 + L1ME2 LINE L1 5926 6153 -11 228 35 0 0 chr17 23930210 23930239 -65574314 + (CCCCAG)n Simple_repeat Simple_repeat 6 34 0 272 376 0 0 chr17 23931055 23931148 -65573405 - MIR SINE MIR -71 191 99 405 319 57 0 chr17 23931844 23931985 -65572568 + MIR SINE MIR 48 196 -66 428 308 111 6 chr17 23932067 23932239 -65572314 - L2 LINE L2 -2 3311 3122 2133 116 3 0 chr17 23932288 23932581 -65571972 - AluSq SINE Alu -19 294 1 1874 143 10 7 chr17 23932581 23932881 -65571672 - AluJb SINE Alu -10 302 1 180 356 58 11 chr17 23932975 23933062 -65571491 - MER5A DNA MER1_type -49 140 50 297 309 146 8 chr17 23934044 23934167 -65570386 + MIR3 SINE MIR 4 143 -65 246 32 0 0 chr17 23935341 23935372 -65569181 + (CAG)n Simple_repeat Simple_repeat 1 31 0 384 308 56 2 chr17 23935553 23935722 -65568831 - MIR SINE MIR -52 210 30 244 331 55 69 chr17 23935976 23936121 -65568432 + MIR SINE MIR 77 219 -43 292 328 73 10 chr17 23937018 23937210 -65567343 + L2 LINE L2 2821 3024 -248 469 237 141 0 chr17 23937339 23937474 -65567079 + MIR SINE MIR 22 175 -87 492 212 0 147 chr17 23939177 23939347 -65565206 - MIR SINE MIR -7 255 111 876 158 0 0 chr17 23939487 23939620 -65564933 + AluJo/FLAM SINE Alu 1 133 -169 1448 144 98 46 chr17 23939621 23939906 -65564647 + AluJb SINE Alu 13 312 0 382 362 14 14 chr17 23940442 23940580 -65563973 + MIR SINE MIR 81 218 -44 809 93 8 0 chr17 23940895 23941024 -65563529 + (TATTG)n Simple_repeat Simple_repeat 2 131 0 2237 66 3 7 chr17 23941026 23941313 -65563240 - AluY SINE Alu -25 286 1 1550 144 38 15 chr17 23941316 23941579 -65562974 - AluJb SINE Alu -17 295 27 458 279 109 0 chr17 23943268 23943415 -65561138 - MIR SINE MIR -53 209 47 365 254 18 35 chr17 23943648 23943762 -65560791 - MIR SINE MIR -138 124 13 384 225 111 1 chr17 23945178 23945299 -65559254 + MIR SINE MIR 30 162 -46 371 302 33 70 chr17 23946069 23946284 -65558269 - MIR SINE MIR -19 243 37 303 130 0 0 chr17 23947463 23947517 -65557036 + (CGG)n Simple_repeat Simple_repeat 3 56 0 415 323 110 69 chr17 23951030 23951448 -65553105 - L1MC3 LINE L1 -1556 6229 5795 2296 79 7 0 chr17 23951580 23951883 -65552670 + AluY SINE Alu 1 305 -6 2030 100 0 7 chr17 23951926 23952216 -65552337 + AluY SINE Alu 1 288 -23 415 242 0 0 chr17 23952244 23952368 -65552185 + L1 LINE L1 5199 5322 -824 1156 125 0 0 chr17 23953166 23953326 -65551227 - AluSx SINE Alu -147 165 6 314 244 84 103 chr17 23953402 23953615 -65550938 + L1M4 LINE L1 4159 4367 -1779 1847 81 0 0 chr17 23954100 23954336 -65550217 + AluY SINE Alu 2 237 -74 510 199 7 157 chr17 23954490 23954553 -65550000 - L1M4 LINE L1 -949 5197 5126 2145 126 0 7 chr17 23954553 23954847 -65549706 - AluSx SINE Alu -20 292 1 510 199 7 157 chr17 23954847 23954963 -65549590 - L1M4 LINE L1 -1020 5126 5080 2376 94 0 22 chr17 23954963 23955281 -65549272 - AluY SINE Alu 0 311 1 510 199 7 157 chr17 23955281 23955406 -65549147 - L1M4 LINE L1 -1066 5080 4938 2372 87 3 0 chr17 23955476 23955765 -65548788 - AluSx SINE Alu -22 290 1 616 140 0 11 chr17 23955765 23955858 -65548695 - AluSq/x SINE Alu -172 141 50 483 253 11 34 chr17 23956082 23956260 -65548293 + L1MC4 LINE L1 7865 8038 -4 277 270 159 24 chr17 23956543 23956669 -65547884 - MIR3 SINE MIR -51 157 15 302 0 0 26 chr17 23956931 23956970 -65547583 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 311 151 38 0 chr17 23957006 23957059 -65547494 - MER66A LTR ERV1 -142 336 282 2134 126 24 0 chr17 23957291 23957585 -65546968 - AluSq SINE Alu -12 301 1 311 355 36 6 chr17 23957604 23957770 -65546783 - L1ME LINE L1 -440 5681 5511 2374 68 3 59 chr17 23957902 23958225 -65546328 - AluSc SINE Alu -4 305 1 1627 188 49 0 chr17 23958437 23958724 -65545829 + AluJo SINE Alu 3 303 -9 185 331 54 54 chr17 23958880 23959010 -65545543 - L2 LINE L2 -1 3312 3183 776 150 7 54 chr17 23959320 23959467 -65545086 + FLAM_C SINE Alu 2 141 -2 1983 130 32 0 chr17 23959544 23959828 -65544725 + AluSx SINE Alu 1 293 -19 970 104 0 0 chr17 23959966 23960091 -65544462 + AluSp SINE Alu 1 125 -188 893 164 77 5 chr17 23960096 23960291 -65544262 - MER41-int LTR ERV1 -2998 2948 2740 * 897 132 68 19 chr17 23960289 23960510 -65544043 - MER41-int LTR ERV1 -2443 2572 1839 * 1215 216 25 17 chr17 23960509 23960814 -65543739 - MER41-int LTR ERV1 -3592 2354 1235 880 85 78 0 chr17 23961843 23961972 -65542581 + MER85 DNA T2_type 1 139 0 237 282 18 18 chr17 23962147 23962257 -65542296 + GA-rich Low_complexity Low_complexity 2 111 0 393 264 65 87 chr17 23963445 23964096 -65540457 - HSREP522 Satellite telomeric -99 636 1 490 263 66 84 chr17 23965207 23965527 -65539026 + L1MC4a LINE L1 6278 6591 -1217 1967 152 7 0 chr17 23965547 23965837 -65538716 + AluSx SINE Alu 3 294 -18 2332 227 106 90 chr17 23965973 23967157 -65537396 + L1MC5 LINE L1 6715 7917 -44 372 205 13 0 chr17 23968308 23968386 -65536167 + MLT1J LTR MaLR 98 176 -335 239 220 51 0 chr17 23968466 23968525 -65536028 + MLT1J LTR MaLR 413 474 -37 2214 67 7 7 chr17 23968527 23968833 -65535720 - AluSx SINE Alu 0 306 1 597 239 94 30 chr17 23968924 23969158 -65535395 - LTR16A1 LTR ERVL 0 457 209 261 267 0 13 chr17 23969633 23969708 -65534845 - MIR SINE MIR -131 131 58 496 212 152 24 chr17 23969925 23970090 -65534463 - LTR16C LTR ERVL -9 482 297 393 271 115 36 chr17 23970580 23970772 -65533781 - MIR SINE MIR -9 253 47 254 336 74 0 chr17 23970860 23970982 -65533571 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23971017 23971054 -65533499 + AT_rich Low_complexity Low_complexity 1 37 0 200 290 29 14 chr17 23971233 23971302 -65533251 + L2 LINE L2 3224 3293 -20 202 224 80 48 chr17 23971636 23971761 -65532792 + MIR3 SINE MIR 3 131 -77 275 295 29 0 chr17 23972007 23972112 -65532441 + L3 LINE CR1 1427 1534 -43 1154 182 57 68 chr17 23972211 23972262 -65532291 - MSTD LTR MaLR 0 396 346 1715 165 47 10 chr17 23972262 23972559 -65531994 - AluJo SINE Alu -4 308 1 1154 182 57 68 chr17 23972559 23972858 -65531695 - MSTD LTR MaLR -50 346 50 2283 111 0 9 chr17 23973722 23974037 -65530516 - AluSx SINE Alu 0 312 1 228 67 0 0 chr17 23974863 23974893 -65529660 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 522 268 83 38 chr17 23974910 23975226 -65529327 - L2 LINE L2 -5 3308 2887 340 302 86 14 chr17 23975796 23975935 -65528618 + MIR SINE MIR 31 179 -83 22 0 0 0 chr17 23976297 23976319 -65528234 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 23976382 23976410 -65528143 + AT_rich Low_complexity Low_complexity 1 28 0 519 222 195 9 chr17 23977514 23977735 -65526818 + L2 LINE L2 2794 3053 -219 2254 87 7 20 chr17 23978594 23978892 -65525661 - AluSg SINE Alu -16 294 1 363 332 41 25 chr17 23978936 23979132 -65525421 - L1M4 LINE L1 -3478 2668 2470 273 240 13 0 chr17 23979663 23979738 -65524815 + Charlie8 DNA MER1_type 97 172 -2245 297 0 0 0 chr17 23979877 23979910 -65524643 + (CA)n Simple_repeat Simple_repeat 2 34 0 2105 132 3 13 chr17 23981212 23981516 -65523037 + AluSp SINE Alu 1 301 -12 22 35 0 0 chr17 23981554 23981583 -65522970 + AT_rich Low_complexity Low_complexity 1 29 0 2097 125 28 0 chr17 23981595 23981884 -65522669 + AluSg SINE Alu 1 297 -13 180 109 36 18 chr17 23981914 23981969 -65522584 + (TATAA)n Simple_repeat Simple_repeat 1 56 0 765 231 193 64 chr17 23982112 23982583 -65521970 + MLT1H1 LTR MaLR 19 555 0 2295 119 7 0 chr17 23983045 23983347 -65521206 + AluSx SINE Alu 1 304 -8 2285 116 0 0 chr17 23983347 23983649 -65520904 + AluSx SINE Alu 1 302 -10 1276 125 0 0 chr17 23983651 23983827 -65520726 + AluSg/x SINE Alu 133 308 -2 1940 229 100 49 chr17 23984153 23984417 -65520136 + MER21B LTR ERV1 17 266 -597 1816 170 3 0 chr17 23984417 23984700 -65519853 + AluJo SINE Alu 7 290 -22 1940 229 100 49 chr17 23984700 23984713 -65519840 + MER21B LTR ERV1 266 277 -586 2123 128 14 0 chr17 23984713 23985001 -65519552 + AluSx SINE Alu 1 292 -20 1940 229 100 49 chr17 23985001 23985420 -65519133 + MER21B LTR ERV1 277 750 -113 183 320 27 0 chr17 23987031 23987106 -65517447 - MIR SINE MIR -107 155 79 22 0 0 0 chr17 23988425 23988447 -65516106 + AT_rich Low_complexity Low_complexity 1 22 0 452 348 61 7 chr17 23988459 23988742 -65515811 + L2 LINE L2 2748 3047 -266 2420 212 40 7 chr17 23988803 23989406 -65515147 - L1MB7 LINE L1 0 6184 5562 3871 268 58 18 chr17 23989422 23991089 -65513464 - L1MB7 LINE L1 -729 5445 3715 1559 167 11 8 chr17 23991203 23991467 -65513086 - AluSq SINE Alu -48 265 1 2372 97 3 0 chr17 23991570 23991878 -65512675 - AluSp SINE Alu 0 313 5 410 261 108 25 chr17 23991941 23992098 -65512455 + MIR SINE MIR 34 203 -59 232 244 8 94 chr17 23992446 23992573 -65511980 - L1P LINE L1 -1130 5016 4901 227 233 148 79 chr17 23992541 23993022 -65511531 - L1M4 LINE L1 -1214 4932 4419 * 719 281 123 37 chr17 23993090 23993663 -65510890 - L2 LINE L2 -104 3209 2584 312 70 0 0 chr17 23993690 23993733 -65510820 + (TG)n Simple_repeat Simple_repeat 2 44 0 219 312 13 26 chr17 23994137 23994214 -65510339 + MIR SINE MIR 184 259 -3 2056 147 0 16 chr17 23994357 23994533 -65510020 - AluSx SINE Alu -3 309 139 2305 113 3 0 chr17 23994533 23994835 -65509718 - AluSg SINE Alu -7 303 1 2056 147 0 16 chr17 23994835 23994972 -65509581 - AluSx SINE Alu -173 139 1 1983 157 3 0 chr17 23995162 23995456 -65509097 - AluSx SINE Alu -17 295 1 2294 99 3 22 chr17 23996242 23996556 -65507997 - AluSc SINE Alu -1 308 1 2251 103 3 0 chr17 23997995 23998285 -65506268 - AluSp SINE Alu -22 291 1 2201 97 0 20 chr17 23998352 23998650 -65505903 - AluY SINE Alu -19 292 1 272 244 39 26 chr17 23998652 23998730 -65505823 + L1MC4a LINE L1 5857 5935 -1873 182 120 0 0 chr17 23998989 23999014 -65505539 - MER5B DNA MER1_type -130 48 24 242 325 84 19 chr17 23999079 23999233 -65505320 + MIR3 SINE MIR 41 204 -4 29 0 0 0 chr17 23999352 23999381 -65505172 + AT_rich Low_complexity Low_complexity 1 29 0 1964 115 45 7 chr17 23999407 23999694 -65504859 - AluSg SINE Alu -12 298 1 1610 178 3 66 chr17 23999713 23999876 -65504677 - AluJo SINE Alu -12 300 165 2470 88 0 0 chr17 23999876 24000183 -65504370 - AluY SINE Alu -4 307 1 1610 178 3 66 chr17 24000183 24000339 -65504214 - AluJo SINE Alu -147 165 1 22 0 0 0 chr17 24000409 24000431 -65504122 + AT_rich Low_complexity Low_complexity 1 22 0 26 101 0 0 chr17 24000550 24000639 -65503914 + AT_rich Low_complexity Low_complexity 1 89 0 28 29 0 0 chr17 24000739 24000774 -65503779 + AT_rich Low_complexity Low_complexity 1 35 0 435 332 53 68 chr17 24000874 24001214 -65503339 + L1M4 LINE L1 4499 4833 -1313 2294 98 7 0 chr17 24001231 24001527 -65503026 - AluSx SINE Alu -3 309 12 217 228 0 53 chr17 24001782 24001839 -65502714 - L2 LINE L2 -2 3270 3217 246 347 124 44 chr17 24002667 24002941 -65501612 - L2 LINE L2 -1805 1509 1214 521 224 67 0 chr17 24002942 24003107 -65501446 - L1M4 LINE L1 -2044 4102 3927 1180 69 0 14 chr17 24003195 24003340 -65501213 + AluSq/x SINE Alu 1 143 -170 657 209 29 3 chr17 24004144 24004298 -65500255 + MIR SINE MIR 25 181 -63 250 291 63 47 chr17 24004409 24004536 -65500017 - MIR SINE MIR -101 161 33 219 244 41 174 chr17 24004794 24005134 -65499419 - L2 LINE L2 -89 3183 2889 2312 94 0 7 chr17 24005476 24005773 -65498780 - AluSx SINE Alu -17 295 1 2123 89 4 0 chr17 24005818 24006089 -65498464 - AluSg SINE Alu -38 272 1 372 196 147 0 chr17 24006194 24006296 -65498257 - MLT1H LTR MaLR 0 549 433 657 231 97 21 chr17 24006321 24006559 -65497994 - MLT1H LTR MaLR -221 328 73 2244 112 3 0 chr17 24006816 24007111 -65497442 + AluSq SINE Alu 1 296 -17 494 264 118 1 chr17 24007842 24007995 -65496558 - MIR SINE MIR -34 228 60 614 282 57 19 chr17 24008078 24008287 -65496266 - MIR SINE MIR -33 229 13 437 280 217 6 chr17 24008692 24008867 -65495686 - MIR SINE MIR -12 250 39 485 315 21 0 chr17 24009008 24009151 -65495402 + MIR SINE MIR 95 240 -22 183 238 270 0 chr17 24009623 24009686 -65494867 - MIR SINE MIR -118 144 65 452 267 35 41 chr17 24009699 24009871 -65494682 - MIR SINE MIR -78 184 14 446 275 0 0 chr17 24010474 24010641 -65493912 + (TG)n Simple_repeat Simple_repeat 1 167 0 524 256 99 37 chr17 24010882 24011073 -65493480 - MIR SINE MIR -20 242 40 1575 236 83 36 chr17 24011635 24011674 -65492879 - L1MB5 LINE L1 0 6174 6138 2412 89 7 0 chr17 24011674 24011978 -65492575 - AluSx SINE Alu -6 306 1 1575 236 83 36 chr17 24011978 24012467 -65492086 - L1MB5 LINE L1 -36 6138 5621 226 276 89 106 chr17 24012664 24012787 -65491766 - MIR SINE MIR -72 136 16 241 315 36 0 chr17 24013457 24013568 -65490985 - MIR SINE MIR -58 150 36 758 259 232 18 chr17 24013655 24013995 -65490558 - L2 LINE L2 -3 3310 2898 291 238 0 0 chr17 24014538 24014601 -65489952 + MIR SINE MIR 90 152 -110 373 273 118 8 chr17 24015091 24015421 -65489132 + LTR33A LTR ERVL 152 792 -3 268 283 4 8 chr17 24016038 24016298 -65488255 + (CA)n Simple_repeat Simple_repeat 1 259 0 215 264 11 23 chr17 24016299 24016386 -65488167 + (CATA)n Simple_repeat Simple_repeat 4 89 0 1804 145 0 35 chr17 24017071 24017381 -65487172 - AluJo SINE Alu 0 312 14 348 179 36 12 chr17 24020394 24020478 -65484075 - MER65C LTR ERV1 0 461 376 5864 96 26 15 chr17 24020581 24020770 -65483783 + L1PA14 LINE L1 4815 5000 -1161 2192 162 0 23 chr17 24020770 24021115 -65483438 + MER1B DNA MER1_type 1 337 0 5864 96 26 15 chr17 24021115 24022260 -65482293 + L1PA14 LINE L1 5000 6152 -9 886 226 21 8 chr17 24022267 24022502 -65482051 - MER65C LTR ERV1 -124 337 100 3586 235 85 41 chr17 24023660 24023873 -65480680 - L1M4 LINE L1 -5140 1402 1200 1834 156 14 3 chr17 24023873 24024161 -65480392 + AluSx SINE Alu 1 291 -21 3586 235 85 41 chr17 24024161 24024509 -65480044 - L1M4 LINE L1 -5342 1200 869 1733 161 38 0 chr17 24024509 24024776 -65479777 + AluJo SINE Alu 1 277 -35 208 0 62 0 chr17 24024782 24024814 -65479739 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 3586 235 85 41 chr17 24024814 24025566 -65478987 - L1M4 LINE L1 -5677 865 23 459 281 140 9 chr17 24025576 24025797 -65478756 + Charlie2 DNA MER1_type 69 318 -2544 1435 200 61 47 chr17 24025816 24026310 -65478243 + Charlie2 DNA MER1_type 1866 2366 -496 297 274 112 17 chr17 24027325 24027504 -65477049 + MLT1J2 LTR MaLR 21 216 -234 403 296 47 52 chr17 24027924 24028010 -65476543 - MIR SINE MIR -22 240 155 2149 132 0 13 chr17 24028010 24028321 -65476232 - AluJo SINE Alu -5 307 1 403 296 47 52 chr17 24028321 24028467 -65476086 - MIR SINE MIR -107 155 9 1546 178 0 19 chr17 24028785 24029044 -65475509 - AluJo SINE Alu -54 258 5 914 165 14 104 chr17 24029782 24029994 -65474559 - AluJo SINE Alu -117 195 3 392 291 89 28 chr17 24030012 24030225 -65474328 + MIR SINE MIR 1 226 -36 266 274 12 0 chr17 24030352 24030436 -65474117 + L1ME3A LINE L1 6081 6165 -5 2088 102 0 42 chr17 24031564 24031897 -65472656 + L1PA13 LINE L1 5845 6163 0 603 249 22 11 chr17 24031899 24032084 -65472469 - MER65C LTR ERV1 -133 328 142 14678 115 35 7 chr17 24032763 24034760 -65469793 + Tigger1 DNA MER2_type 42 2114 -304 1936 150 22 29 chr17 24034760 24035074 -65469479 + AluJo SINE Alu 1 312 0 14678 115 35 7 chr17 24035074 24035388 -65469165 + Tigger1 DNA MER2_type 2114 2418 0 2199 163 71 19 chr17 24035937 24036348 -65468205 - MSTB1 LTR MaLR 0 432 1 1301 140 0 5 chr17 24036827 24037020 -65467533 + AluJo SINE Alu 121 312 0 1757 125 84 6 chr17 24037020 24037331 -65467222 + Tigger1 DNA MER2_type 2083 2417 -1 2197 163 71 19 chr17 24037882 24038293 -65466260 - MSTB1 LTR MaLR 0 432 1 447 305 144 11 chr17 24039892 24040246 -65464307 - MLT1H1 LTR MaLR -121 434 34 431 331 43 23 chr17 24040755 24041314 -65463239 - L1M4 LINE L1 -839 5307 4735 219 69 0 0 chr17 24041329 24041358 -65463195 + (TG)n Simple_repeat Simple_repeat 2 30 0 1077 258 103 64 chr17 24043131 24043701 -65460852 - L1M4 LINE L1 -849 5297 4698 1810 165 50 0 chr17 24043701 24043998 -65460555 - AluSx SINE Alu 0 312 1 1077 258 103 64 chr17 24043998 24044056 -65460497 - L1M4 LINE L1 -1448 4698 4644 269 20 80 0 chr17 24044755 24044805 -65459748 + (TTTG)n Simple_repeat Simple_repeat 4 57 0 184 271 0 71 chr17 24045074 24045144 -65459409 - L2 LINE L2 -1916 1398 1334 2841 168 4 15 chr17 24046874 24047416 -65457137 + L1MB4 LINE L1 5389 5924 -256 2693 152 19 2 chr17 24047431 24047853 -65456700 - MSTB1 LTR MaLR -3 429 1 257 146 0 0 chr17 24047855 24047896 -65456657 + L1M4 LINE L1 3534 3574 -2572 258 216 10 72 chr17 24047903 24048000 -65456553 - MLT1E1 LTR MaLR -278 376 286 * 276 244 100 0 chr17 24047979 24048069 -65456484 - MLT1E1 LTR MaLR -487 167 69 1470 214 127 37 chr17 24048609 24049072 -65455481 - MLT1D LTR MaLR 0 505 1 1132 263 30 0 chr17 24049236 24049536 -65455017 - ERVL LTR ERVL -1122 4642 4334 1282 158 54 15 chr17 24049552 24049811 -65454742 - MLT1B LTR MaLR -121 269 1 240 184 0 0 chr17 24050269 24050318 -65454235 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 235 116 23 23 chr17 24050363 24050406 -65454147 - L2 LINE L2 -75 3238 3196 756 199 102 42 chr17 24050406 24050622 -65453931 - MER58B DNA MER1_type 0 341 113 950 112 0 0 chr17 24050887 24051012 -65453541 + FLAM_C SINE Alu 1 125 -8 233 56 0 28 chr17 24052184 24052220 -65452333 + (CA)n Simple_repeat Simple_repeat 2 36 0 282 309 20 26 chr17 24053374 24053526 -65451027 + (TCTG)n Simple_repeat Simple_repeat 2 152 0 887 298 98 24 chr17 24053771 24054344 -65450209 - L1ME1 LINE L1 -9 6157 5543 180 0 0 0 chr17 24054603 24054623 -65449930 + (CCCCAG)n Simple_repeat Simple_repeat 2 21 0 283 154 123 31 chr17 24054821 24054886 -65449667 - MIR SINE MIR -105 157 87 424 221 9 0 chr17 24055529 24055642 -65448911 + Charlie4 DNA MER1_type 1780 1893 -68 304 241 18 54 chr17 24055895 24056007 -65448546 - L2 LINE L2 -15 3298 3191 267 350 50 0 chr17 24056140 24056280 -65448273 + L2 LINE L2 2915 3061 -211 199 237 247 0 chr17 24056809 24056902 -65447651 - MIR SINE MIR -63 145 30 255 300 76 28 chr17 24057377 24057716 -65446837 - L2 LINE L2 -297 3016 2657 337 301 45 23 chr17 24058436 24058569 -65445984 - MIR SINE MIR -80 182 47 2197 132 0 0 chr17 24063203 24063499 -65441054 - AluSq SINE Alu -2 311 16 189 351 27 9 chr17 24064380 24064491 -65440062 - MIR SINE MIR -117 145 33 325 257 0 0 chr17 24064787 24064857 -65439696 - MIR SINE MIR -142 120 51 344 301 56 14 chr17 24065948 24066091 -65438462 - MIR3 SINE MIR -4 204 56 562 254 88 7 chr17 24066733 24066910 -65437643 - MIR SINE MIR -9 253 64 237 242 66 22 chr17 24067347 24067438 -65437115 - MIR3 SINE MIR -52 156 62 569 260 106 7 chr17 24067956 24068287 -65436266 + LTR16C LTR ERVL 88 474 -17 228 86 0 0 chr17 24068405 24068440 -65436113 + (TCC)n Simple_repeat Simple_repeat 1 35 0 344 239 17 17 chr17 24068730 24068978 -65435575 + (TGGA)n Simple_repeat Simple_repeat 1 248 0 446 320 23 0 chr17 24069384 24069512 -65435041 - MIR SINE MIR 0 262 132 844 166 6 12 chr17 24069635 24069980 -65434573 + (TGGA)n Simple_repeat Simple_repeat 1 343 0 778 191 5 5 chr17 24069992 24070214 -65434339 + (TGGA)n Simple_repeat Simple_repeat 1 222 0 579 209 11 6 chr17 24070228 24070405 -65434148 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 830 184 6 0 chr17 24070427 24070606 -65433947 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 429 219 126 0 chr17 24071047 24071166 -65433387 + MIR3 SINE MIR 45 178 -30 306 125 0 0 chr17 24071310 24071358 -65433195 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 253 234 31 0 chr17 24071537 24071601 -65432952 - MIR SINE MIR -112 150 85 256 179 9 104 chr17 24073117 24073223 -65431330 + MIR SINE MIR 27 122 -86 672 264 24 0 chr17 24073836 24074003 -65430550 + MIR SINE MIR 32 202 -60 3773 125 22 16 chr17 24074650 24074969 -65429584 + L1PA14 LINE L1 4687 5003 -1158 2094 154 0 23 chr17 24074969 24075314 -65429239 + MER1B DNA MER1_type 1 337 0 3773 125 22 16 chr17 24075314 24076186 -65428367 + L1PA14 LINE L1 5003 5882 -279 268 224 0 17 chr17 24076330 24076388 -65428165 + L2 LINE L2 3193 3249 -64 21 0 0 0 chr17 24076422 24076443 -65428110 + AT_rich Low_complexity Low_complexity 1 21 0 2236 117 0 3 chr17 24076953 24077252 -65427301 - AluSg SINE Alu -12 298 1 361 281 141 36 chr17 24078923 24079154 -65425399 - L1ME LINE L1 -477 5685 5426 312 271 47 28 chr17 24079155 24079262 -65425291 - L1ME LINE L1 -2405 5403 5295 960 106 0 0 chr17 24079388 24079511 -65425042 - AluSg/x SINE Alu -36 276 154 3620 188 53 6 chr17 24079518 24080588 -65423965 - L1MB7 LINE L1 -76 6108 4997 442 301 84 55 chr17 24080680 24081145 -65423408 - L1MEc LINE L1 -4373 1756 1254 550 265 118 19 chr17 24081167 24081480 -65423073 - L1MEc LINE L1 -4880 1239 896 256 289 94 62 chr17 24081613 24081741 -65422812 + MIR SINE MIR 112 243 -19 369 330 126 15 chr17 24081743 24082004 -65422549 + L1M4 LINE L1 4376 4665 -1481 2133 108 10 7 chr17 24082007 24082322 -65422231 + AluY SINE Alu 1 311 0 454 241 71 14 chr17 24082941 24083082 -65421471 - MIR SINE MIR -99 163 15 505 262 136 16 chr17 24083134 24083325 -65421228 + MIR SINE MIR 48 261 -1 423 234 0 0 chr17 24084189 24084313 -65420240 + (TCCA)n Simple_repeat Simple_repeat 3 126 0 267 293 0 0 chr17 24084737 24084812 -65419741 + MIR SINE MIR 19 93 -115 310 203 0 0 chr17 24084986 24085045 -65419508 - MIR SINE MIR -89 119 61 328 248 20 94 chr17 24085059 24085208 -65419345 + MIR3 SINE MIR 44 181 -27 211 346 167 12 chr17 24086561 24086801 -65417752 - L2 LINE L2 -459 2855 2579 609 213 0 0 chr17 24087470 24087639 -65416914 + (ATG)n Simple_repeat Simple_repeat 2 170 0 566 220 6 0 chr17 24087685 24087862 -65416691 + (ATG)n Simple_repeat Simple_repeat 3 180 0 219 106 45 45 chr17 24087864 24087930 -65416623 + (ATGGTG)n Simple_repeat Simple_repeat 1 66 0 424 253 86 34 chr17 24087939 24087982 -65416571 + L1ME LINE L1 5575 5614 -507 584 246 0 0 chr17 24087982 24088108 -65416445 - FLAM_A SINE Alu -7 126 1 424 253 86 34 chr17 24088108 24088297 -65416256 + L1ME LINE L1 5614 5819 -302 467 269 35 7 chr17 24088407 24088548 -65416005 + L2 LINE L2 3167 3311 -2 313 259 165 81 chr17 24088700 24088936 -65415617 + MLT1L LTR MaLR 135 390 -225 283 332 35 10 chr17 24090335 24090511 -65414042 - MIR SINE MIR -50 212 33 234 0 0 0 chr17 24093567 24093593 -65410960 + (TA)n Simple_repeat Simple_repeat 1 26 0 495 48 0 0 chr17 24094972 24095034 -65409519 + (GA)n Simple_repeat Simple_repeat 2 63 0 243 0 0 0 chr17 24095044 24095071 -65409482 + (A)n Simple_repeat Simple_repeat 1 27 0 907 287 71 2 chr17 24096385 24096849 -65407704 - L1M4 LINE L1 -3404 2742 2247 38 61 0 0 chr17 24096850 24096916 -65407637 + AT_rich Low_complexity Low_complexity 1 66 0 832 160 183 6 chr17 24097058 24097227 -65407326 - AluSg/x SINE Alu -27 282 84 1007 194 94 43 chr17 24097227 24097556 -65406997 + MER119 DNA MER1_type 75 420 -163 1997 244 66 47 chr17 24097557 24098614 -65405939 - L1ME1 LINE L1 -79 6087 4997 257 314 39 0 chr17 24098639 24098741 -65405812 - MLT1K LTR MaLR -104 484 379 959 152 52 9 chr17 24099857 24100067 -65404486 + MER33 DNA MER1_type 1 219 -105 1099 244 155 40 chr17 24100084 24100555 -65403998 + L1MC4 LINE L1 7278 7802 -240 593 294 58 17 chr17 24100559 24100852 -65403701 + HERVL LTR ERVL 4077 4381 -1273 362 178 0 74 chr17 24101338 24101501 -65403052 + (ATGGTG)n Simple_repeat Simple_repeat 1 151 0 374 227 64 27 chr17 24101892 24102002 -65402551 - MIR SINE MIR -13 249 136 2527 174 16 4 chr17 24102004 24102493 -65402060 - L1MB2 LINE L1 -7 6164 5670 204 290 32 0 chr17 24102803 24102865 -65401688 - L2 LINE L2 -1 3312 3249 613 294 64 5 chr17 24103008 24103226 -65401327 - MIR SINE MIR -1 261 31 227 323 156 40 chr17 24104158 24104536 -65400017 + L2 LINE L2 2826 3247 -25 373 290 19 0 chr17 24104783 24104890 -65399663 - L2 LINE L2 -18 3254 3146 2248 119 0 0 chr17 24105589 24105899 -65398654 - AluSg SINE Alu 0 310 1 276 288 42 8 chr17 24106193 24106311 -65398242 - MER94 DNA DNA -2 132 11 185 216 0 39 chr17 24106316 24106367 -65398186 + MIR SINE MIR 103 151 -111 1681 217 82 16 chr17 24106409 24106898 -65397655 - MER90 LTR ERV1 0 614 94 559 271 126 14 chr17 24107668 24107875 -65396678 + MIR SINE MIR 30 259 -3 190 279 115 0 chr17 24108292 24108353 -65396200 - MIR3 SINE MIR -133 75 8 346 221 48 77 chr17 24108401 24108505 -65396048 - MIR SINE MIR -70 192 92 233 405 9 0 chr17 24108719 24108830 -65395723 + L2 LINE L2 2748 2859 -455 207 0 0 0 chr17 24109026 24109049 -65395504 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1889 120 0 27 chr17 24109071 24109363 -65395190 - AluSq SINE Alu -19 294 11 1933 121 17 10 chr17 24109478 24109775 -65394778 - AluSq SINE Alu -14 299 1 915 148 7 0 chr17 24109776 24109918 -65394635 - AluY SINE Alu -168 143 1 1189 159 120 33 chr17 24110938 24111239 -65393314 - SST1 Satellite centromeric 0 1563 1237 854 163 13 0 chr17 24111244 24111397 -65393156 + AluSg/x SINE Alu 155 309 -1 6848 162 16 17 chr17 24111463 24112878 -65391675 - SST1 Satellite centromeric -150 1413 1 1733 293 57 36 chr17 24113570 24114388 -65390165 - SST1 Satellite centromeric -471 1092 245 345 75 0 0 chr17 24114388 24114441 -65390112 + (CCCCAG)n Simple_repeat Simple_repeat 5 57 0 1733 293 57 36 chr17 24114441 24114692 -65389861 - SST1 Satellite centromeric -1318 245 1 217 259 25 0 chr17 24115435 24115516 -65389037 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 * 239 173 19 0 chr17 24115473 24115525 -65389028 + GA-rich Low_complexity Low_complexity 2 54 0 219 103 0 0 chr17 24115532 24115571 -65388982 + (CA)n Simple_repeat Simple_repeat 2 40 0 2387 292 51 44 chr17 24115607 24124128 -65380425 - SST1 Satellite centromeric -45 8580 1 272 293 10 11 chr17 24124374 24124477 -65380076 + MIR SINE MIR 49 144 -64 360 311 56 12 chr17 24125327 24125488 -65379065 - Charlie4a DNA MER1_type -61 447 280 247 261 58 0 chr17 24126120 24126189 -65378364 - MIR SINE MIR -60 148 76 479 195 8 0 chr17 24127252 24127370 -65377183 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 879 124 147 23 chr17 24127380 24127557 -65376996 + AluSg/x SINE Alu 114 312 0 598 217 132 0 chr17 24127611 24127763 -65376790 - MIR SINE MIR -26 236 65 226 356 0 0 chr17 24128209 24128296 -65376257 - MIR SINE MIR -115 147 61 199 240 40 0 chr17 24128427 24128477 -65376076 - MIR SINE MIR -102 160 109 468 191 145 33 chr17 24128891 24129043 -65375510 + MIR SINE MIR 21 189 -73 533 292 13 5 chr17 24129045 24129230 -65375323 + MIR SINE MIR 20 205 -57 321 26 0 0 chr17 24130038 24130076 -65374477 + (TG)n Simple_repeat Simple_repeat 2 39 0 639 265 93 0 chr17 24130469 24130673 -65373880 + LTR16C LTR ERVL 255 477 -14 280 290 149 0 chr17 24130821 24130928 -65373625 - MIR SINE MIR -28 234 112 229 149 64 0 chr17 24131604 24131651 -65372902 - L2 LINE L2 -217 3055 3006 355 311 0 10 chr17 24131726 24131829 -65372724 + MIR SINE MIR 43 144 -64 228 339 131 0 chr17 24132399 24132529 -65372024 + L2 LINE L2 3125 3271 -1 390 294 24 35 chr17 24132684 24132854 -65371699 - Charlie4a DNA MER1_type -61 447 280 267 141 0 0 chr17 24133531 24133579 -65370974 - MIR SINE MIR -60 148 100 587 242 30 0 chr17 24134888 24135020 -65369533 - MIR SINE MIR -95 167 32 194 311 104 47 chr17 24135286 24135392 -65369161 - MIR SINE MIR -145 117 6 265 203 38 38 chr17 24135625 24135704 -65368849 - MIR SINE MIR -76 132 54 181 255 0 20 chr17 24136440 24136491 -65368062 - MIR SINE MIR -60 148 99 203 321 62 0 chr17 24136962 24137043 -65367510 + MIR SINE MIR 84 169 -93 303 284 53 0 chr17 24137256 24137351 -65367202 + MIR SINE MIR 85 184 -78 192 333 11 33 chr17 24137419 24137509 -65367044 + MIR SINE MIR 49 136 -126 457 219 126 0 chr17 24137674 24137793 -65366760 - MIR3 SINE MIR -30 178 45 436 216 75 52 chr17 24137989 24138123 -65366430 - L1M4 LINE L1 -2984 3162 3026 506 286 118 31 chr17 24138140 24138395 -65366158 + MER77 LTR ERV1 323 599 -6 1731 208 18 0 chr17 24139046 24139387 -65365166 - MER7A DNA MER2_type 0 346 2 26 0 0 0 chr17 24139445 24139471 -65365082 + AT_rich Low_complexity Low_complexity 1 26 0 206 282 24 24 chr17 24139664 24139749 -65364804 + (TATG)n Simple_repeat Simple_repeat 3 87 0 301 298 107 115 chr17 24140525 24141378 -65363175 - L1MC5 LINE L1 -242 7719 6874 336 286 78 108 chr17 24140632 24140964 -65363589 + HAL1b LINE L1 1018 1339 -9 21 36 0 0 chr17 24142656 24142684 -65361869 + AT_rich Low_complexity Low_complexity 1 28 0 303 258 10 166 chr17 24143547 24143842 -65360711 + L1MCa LINE L1 1652 1900 -4526 1193 362 123 14 chr17 24144578 24145534 -65359019 + L1MEd LINE L1 506 1606 -4704 271 255 32 11 chr17 24145767 24145861 -65358692 + MIR SINE MIR 48 143 -119 189 332 58 10 chr17 24145860 24145985 -65358568 + MIR SINE MIR 46 176 -69 * 554 310 107 9 chr17 24146679 24146895 -65357658 + MIR SINE MIR 20 256 -6 520 329 230 16 chr17 24147068 24147451 -65357102 + L2 LINE L2 2848 3312 -1 395 332 47 23 chr17 24147639 24147853 -65356700 - L2 LINE L2 -177 3095 2877 215 267 216 17 chr17 24148708 24148824 -65355729 + L2 LINE L2 3174 3312 -1 1097 273 103 7 chr17 24148864 24149011 -65355542 - L2 LINE L2 -1 3312 3181 1530 162 63 25 chr17 24149011 24149295 -65355258 + AluJb SINE Alu 1 295 -17 1097 273 103 7 chr17 24149295 24149564 -65354989 - L2 LINE L2 -132 3181 2856 318 325 98 35 chr17 24150077 24150332 -65354221 + L2 LINE L2 2917 3187 -85 330 248 228 0 chr17 24150630 24150731 -65353822 + L2 LINE L2 3189 3312 -1 317 271 66 41 chr17 24150737 24150859 -65353694 - MIR SINE MIR -85 177 53 307 314 51 22 chr17 24151217 24151354 -65353199 - MIR SINE MIR -80 182 42 270 314 112 21 chr17 24151363 24151551 -65353002 - MIR SINE MIR -24 238 34 186 352 155 7 chr17 24151651 24151793 -65352760 - L3 LINE CR1 -31 1546 1384 2454 71 0 3 chr17 24151798 24152106 -65352447 - AluSg SINE Alu -3 307 1 423 245 107 127 chr17 24152159 24152514 -65352039 - L2 LINE L2 0 3313 2966 362 297 79 60 chr17 24152561 24152719 -65351834 + HAL1 LINE L1 1 155 -2352 1791 171 0 0 chr17 24152719 24153011 -65351542 - AluJo SINE Alu -20 292 1 362 297 79 60 chr17 24153011 24153233 -65351320 + HAL1 LINE L1 155 388 -2119 349 192 26 13 chr17 24153228 24153306 -65351247 + HAL1 LINE L1 1304 1382 -1125 * 595 272 70 32 chr17 24153289 24153605 -65350948 + HAL1 LINE L1 2022 2349 -158 1592 80 0 55 chr17 24155007 24155245 -65349308 + AluSx SINE Alu 1 225 -87 321 276 47 39 chr17 24155541 24155668 -65348885 + L1ME4a LINE L1 5979 6106 -15 30 27 0 0 chr17 24155708 24155745 -65348808 + AT_rich Low_complexity Low_complexity 1 37 0 191 310 84 0 chr17 24155764 24155835 -65348718 + L2 LINE L2 2991 3067 -205 1178 139 11 5 chr17 24156228 24156415 -65348138 - AluSx SINE Alu -124 188 1 376 89 56 22 chr17 24156415 24156505 -65348048 - Charlie5 DNA MER1_type -77 2535 2443 1634 78 13 13 chr17 24156505 24156735 -65347818 + L1PA6 LINE L1 5922 6151 -3 2209 125 0 0 chr17 24156760 24157072 -65347481 - AluSx SINE Alu 0 312 1 256 45 0 45 chr17 24157084 24157128 -65347425 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 1216 104 16 6 chr17 24157140 24157323 -65347230 - AluSg/x SINE Alu -25 285 101 2308 102 0 3 chr17 24157702 24158015 -65346538 - AluSx SINE Alu 0 312 1 240 213 0 0 chr17 24158169 24158216 -65346337 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 289 240 130 0 chr17 24158218 24158318 -65346235 - L2 LINE L2 0 3313 3201 1774 145 31 3 chr17 24158349 24158638 -65345915 + AluJb SINE Alu 1 297 -15 658 111 154 17 chr17 24158777 24158894 -65345659 + FLAM_C SINE Alu 1 133 0 2022 90 25 0 chr17 24158915 24159238 -65345315 - AluSp SINE Alu 0 330 1 241 303 0 0 chr17 24159469 24159545 -65345008 + C-rich Low_complexity Low_complexity 1 76 0 423 196 0 0 chr17 24159558 24159691 -65344862 + C-rich Low_complexity Low_complexity 1 133 0 225 139 0 0 chr17 24159830 24159873 -65344680 + (TC)n Simple_repeat Simple_repeat 1 43 0 1796 146 0 10 chr17 24159928 24160259 -65344294 - AluSx SINE Alu 0 328 1 1414 182 128 0 chr17 24160261 24160519 -65344034 - AluJb SINE Alu -11 291 1 455 235 83 78 chr17 24160521 24160751 -65343802 + MER102b DNA MER1_type 88 318 -23 2232 73 10 3 chr17 24160787 24161088 -65343465 - AluSq SINE Alu -10 303 1 276 354 101 25 chr17 24161214 24161412 -65343141 + MIR SINE MIR 15 227 -35 347 109 36 0 chr17 24161754 24161809 -65342744 - Alu SINE Alu -246 57 1 1612 251 37 9 chr17 24162092 24162547 -65342006 - L1MB5 LINE L1 0 6174 5707 1097 251 117 3 chr17 24163032 24163366 -65341187 + MLT1B LTR MaLR 1 372 -18 315 131 10 172 chr17 24163690 24163789 -65340764 - MLT1B LTR MaLR -307 83 1 919 162 7 0 chr17 24163815 24163969 -65340584 + FRAM SINE Alu 2 156 -20 924 248 133 0 chr17 24164413 24164699 -65339854 + MLT1G LTR MaLR 1 324 -266 447 233 60 45 chr17 24164695 24164828 -65339725 + MLT1G LTR MaLR 454 588 -2 * 554 239 0 0 chr17 24165363 24165472 -65339081 + MER81 DNA DNA 2 110 -4 676 241 100 26 chr17 24166128 24166379 -65338174 - MLT1G LTR MaLR -288 242 1 442 298 85 0 chr17 24167246 24167387 -65337166 + MIR SINE MIR 2 154 -108 250 317 69 57 chr17 24167531 24167713 -65336840 + MIR SINE MIR 6 193 -49 482 214 22 116 chr17 24168163 24168270 -65336283 + L1ME2 LINE L1 5214 5289 -877 2307 83 26 0 chr17 24168270 24168572 -65335981 + AluSg SINE Alu 1 310 0 482 214 22 116 chr17 24168572 24168703 -65335850 + L1ME2 LINE L1 5289 5431 -735 768 65 19 9 chr17 24168811 24168919 -65335634 + AluSp/q SINE Alu 188 296 -17 192 77 0 0 chr17 24168958 24168984 -65335569 + (T)n Simple_repeat Simple_repeat 1 26 0 1779 52 4 21 chr17 24168984 24169217 -65335336 - AluY SINE Alu -82 229 1 2852 102 11 9 chr17 24169217 24169656 -65334897 + MER4D LTR ERV1 204 643 -260 1272 136 15 157 chr17 24169686 24170024 -65334529 + AluJo SINE Alu 11 300 -12 1569 76 84 12 chr17 24170026 24170275 -65334278 + MER4D LTR ERV1 637 903 0 688 252 106 57 chr17 24170275 24170377 -65334176 + L1ME2 LINE L1 5792 5887 -277 1960 138 0 0 chr17 24170377 24170673 -65333880 + AluSx SINE Alu 1 296 -16 688 252 106 57 chr17 24170673 24170852 -65333701 + L1ME2 LINE L1 5887 6087 -77 281 283 98 0 chr17 24171026 24171118 -65333435 + MIR3 SINE MIR 82 182 -26 306 242 26 108 chr17 24171264 24171458 -65333095 + MIR SINE MIR 79 256 -6 25 0 0 0 chr17 24171568 24171593 -65332960 + GC_rich Low_complexity Low_complexity 1 25 0 340 299 62 67 chr17 24171887 24172081 -65332472 - L1MDa LINE L1 -3965 2575 2383 514 266 34 17 chr17 24172493 24172670 -65331883 + MIR SINE MIR 72 251 -11 1928 110 20 14 chr17 24172731 24173023 -65331530 - AluSx SINE Alu -18 294 1 257 308 89 7 chr17 24173135 24173281 -65331272 - MIR3 SINE MIR -16 192 35 270 189 38 42 chr17 24173408 24173506 -65331047 - MIR SINE MIR -58 150 81 216 135 0 0 chr17 24173736 24173773 -65330780 + (T)n Simple_repeat Simple_repeat 1 37 0 405 321 70 5 chr17 24174298 24174485 -65330068 - MIR SINE MIR -14 248 50 * 717 266 258 16 chr17 24174477 24175037 -65329516 - L2 LINE L2 -4 3309 2605 190 349 16 0 chr17 24175176 24175239 -65329314 - MIR SINE MIR -113 149 86 190 104 21 21 chr17 24175339 24175387 -65329166 + (TGGGGG)n Simple_repeat Simple_repeat 1 48 0 544 163 0 22 chr17 24175402 24175586 -65328967 + G-rich Low_complexity Low_complexity 1 180 0 186 222 0 0 chr17 24175610 24175664 -65328889 + G-rich Low_complexity Low_complexity 1 54 0 2010 130 7 3 chr17 24175781 24176088 -65328465 + AluSg SINE Alu 1 308 -2 353 327 60 24 chr17 24176100 24176351 -65328202 + L1MC4 LINE L1 7623 7882 -160 736 183 0 0 chr17 24176393 24176508 -65328045 - FLAM_C SINE Alu -18 115 1 2361 86 0 0 chr17 24176533 24176837 -65327716 + AluY SINE Alu 1 304 -7 237 180 49 33 chr17 24177061 24177122 -65327431 - MIR3 SINE MIR -46 162 101 317 269 55 0 chr17 24177248 24177372 -65327181 - MIR SINE MIR -63 145 43 237 256 144 0 chr17 24177390 24177480 -65327073 + MIR SINE MIR 16 118 -144 307 369 65 28 chr17 24177780 24177994 -65326559 + L2 LINE L2 2940 3161 -111 269 326 39 31 chr17 24178072 24178201 -65326352 + MIR SINE MIR 21 150 -112 2700 209 46 24 chr17 24178262 24178918 -65325635 - L1ME1 LINE L1 -5 6161 5488 2199 67 46 0 chr17 24178918 24179201 -65325352 - AluSg SINE Alu -14 296 1 2700 209 46 24 chr17 24179201 24179220 -65325333 - L1ME1 LINE L1 -678 5488 5471 1218 136 4 78 chr17 24179221 24179400 -65325153 - AluJo SINE Alu -3 309 151 2349 68 3 0 chr17 24179400 24179694 -65324859 - AluSx SINE Alu -17 295 1 1218 136 4 78 chr17 24179694 24179756 -65324797 - AluJo SINE Alu -161 151 86 608 227 31 43 chr17 24179756 24180013 -65324540 - L1ME1 LINE L1 -670 5492 5254 523 188 0 0 chr17 24180177 24180257 -65324296 + AluS SINE Alu 13 92 -220 2340 64 0 0 chr17 24180508 24180803 -65323750 - AluY SINE Alu -16 295 1 869 173 53 62 chr17 24180947 24181139 -65323414 - L1MD3 LINE L1 0 7995 7804 2262 100 0 13 chr17 24181139 24181448 -65323105 - AluSg SINE Alu -5 305 1 869 173 53 62 chr17 24181448 24181481 -65323072 - L1MD3 LINE L1 -191 7804 7772 1005 259 174 32 chr17 24181501 24181937 -65322616 + L1MC4a LINE L1 5436 5933 -1875 317 262 179 0 chr17 24182393 24182477 -65322076 + LTR33A LTR ERVL 59 157 -366 198 266 62 0 chr17 24182768 24182832 -65321721 - MIR SINE MIR -66 142 75 436 328 129 34 chr17 24182842 24183011 -65321542 + L2 LINE L2 2863 3015 -298 1765 183 0 0 chr17 24183011 24183306 -65321247 - AluJo SINE Alu -17 295 1 436 328 129 34 chr17 24183306 24183548 -65321005 + L2 LINE L2 3015 3313 0 376 296 61 109 chr17 24183962 24184118 -65320435 + MIR SINE MIR 9 152 -110 2013 112 7 0 chr17 24184118 24184403 -65320150 - AluSx SINE Alu -25 287 1 376 296 61 109 chr17 24184403 24184476 -65320077 + MIR SINE MIR 152 227 -35 241 272 97 10 chr17 24184481 24184584 -65319969 - MIR SINE MIR -58 204 93 523 92 0 13 chr17 24184813 24184889 -65319664 + Alu SINE Alu 1 75 -243 297 189 32 84 chr17 24185432 24185527 -65319026 + MIR SINE MIR 27 116 -146 184 284 91 11 chr17 24185641 24185729 -65318824 + L2 LINE L2 2634 2728 -586 882 44 0 26 chr17 24185799 24185913 -65318640 - L1PA6 LINE L1 0 6154 6044 1607 171 4 0 chr17 24185913 24186177 -65318376 - AluJo SINE Alu -20 292 28 277 306 45 9 chr17 24186181 24186292 -65318261 + L1ME1 LINE L1 6043 6157 -9 2063 145 0 0 chr17 24186293 24186596 -65317957 - AluSx SINE Alu -9 303 1 706 80 97 0 chr17 24186752 24186865 -65317688 - MER41B LTR ERV1 0 635 512 2175 102 0 7 chr17 24186865 24187169 -65317384 + AluSg SINE Alu 1 302 -8 1309 113 0 10 chr17 24187491 24187685 -65316868 + AluSg/x SINE Alu 121 312 0 2903 126 38 34 chr17 24187685 24188015 -65316538 - MER41B LTR ERV1 -126 509 175 2205 66 3 20 chr17 24188015 24188316 -65316237 - AluY SINE Alu -15 296 1 2903 126 38 34 chr17 24188316 24188492 -65316061 - MER41B LTR ERV1 -460 175 1 781 247 207 31 chr17 24188517 24188708 -65315845 + L2 LINE L2 2764 2920 -393 2221 98 3 0 chr17 24188708 24189005 -65315548 - AluSx SINE Alu -14 298 1 781 247 207 31 chr17 24189005 24189287 -65315266 + L2 LINE L2 2920 3308 -5 224 226 0 0 chr17 24189687 24189740 -65314813 - L2 LINE L2 -323 2949 2897 2227 55 21 7 chr17 24189748 24190038 -65314515 + AluY SINE Alu 6 299 -12 919 254 101 10 chr17 24190313 24190679 -65313874 + L1ME LINE L1 5237 5629 -535 793 239 17 11 chr17 24190681 24190857 -65313696 + AluJo SINE Alu 2 178 -134 544 172 11 0 chr17 24190851 24190944 -65313609 + AluJo/FRAM SINE Alu 137 230 -82 * 180 186 47 23 chr17 24191055 24191098 -65313455 - MIR SINE MIR -55 153 110 192 253 169 0 chr17 24191792 24191875 -65312678 - MIR SINE MIR -71 137 41 185 285 63 32 chr17 24192106 24192264 -65312289 - L2 LINE L2 -253 3060 2898 220 206 82 27 chr17 24193127 24193200 -65311353 + MIR SINE MIR 108 184 -78 547 258 101 0 chr17 24193650 24193851 -65310702 + L2 LINE L2 2767 2984 -329 918 181 0 7 chr17 24193973 24194128 -65310425 - AluJo/FRAM SINE Alu -22 290 137 2321 100 0 0 chr17 24194128 24194437 -65310116 - AluSq SINE Alu -4 309 1 398 308 31 25 chr17 24194438 24194597 -65309956 + L2 LINE L2 3151 3310 -3 281 223 157 57 chr17 24194968 24195137 -65309416 + MIR SINE MIR 11 195 -58 567 203 250 0 chr17 24195291 24195553 -65309000 + L2 LINE L2 2676 3016 -297 372 291 111 41 chr17 24195554 24195726 -65308827 + L2 LINE L2 3130 3313 0 205 267 0 0 chr17 24195726 24195771 -65308782 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 520 250 16 0 chr17 24196200 24196324 -65308229 - MIR SINE MIR -32 230 105 235 296 0 0 chr17 24199184 24199255 -65305298 + C-rich Low_complexity Low_complexity 1 71 0 259 229 288 0 chr17 24199850 24199968 -65304585 + MIR3 SINE MIR 32 183 -25 1972 114 35 0 chr17 24200041 24200330 -65304223 + AluSx SINE Alu 12 310 -2 2021 137 12 19 chr17 24200700 24201022 -65303531 - 7SLRNA srpRNA srpRNA 0 320 1 182 222 22 0 chr17 24201078 24201123 -65303430 - L2 LINE L2 -2 3270 3225 422 54 0 0 chr17 24201139 24201195 -65303358 - Alu SINE Alu -10 302 247 2449 64 0 3 chr17 24201482 24201793 -65302760 - AluY SINE Alu -1 310 1 483 216 48 128 chr17 24202327 24202414 -65302139 + MER113 DNA MER1_type? 62 154 -367 1857 158 0 0 chr17 24202414 24202706 -65301847 + AluJo SINE Alu 1 292 -20 483 216 48 128 chr17 24202706 24202868 -65301685 + MER113 DNA MER1_type? 154 291 -230 185 354 0 15 chr17 24203231 24203296 -65301257 + MIR SINE MIR 30 93 -115 377 241 23 0 chr17 24203299 24203386 -65301167 - L2 LINE L2 0 3313 3225 365 316 87 20 chr17 24203414 24203610 -65300943 - L2 LINE L2 -61 3252 3044 630 274 43 11 chr17 24203624 24203810 -65300743 + MLT1L LTR MaLR 347 538 -77 601 281 177 3 chr17 24203867 24204196 -65300357 - L2 LINE L2 -297 3016 2633 337 285 43 126 chr17 24204355 24204523 -65300030 + L2 LINE L2 2543 2681 -633 767 177 0 0 chr17 24204523 24204653 -65299900 - FLAM_C SINE Alu 0 133 4 337 285 43 126 chr17 24204653 24204761 -65299792 + L2 LINE L2 2681 2796 -518 308 310 29 29 chr17 24204762 24204933 -65299620 - MLT1J2 LTR MaLR 0 450 280 2344 99 0 0 chr17 24206037 24206330 -65298223 - AluSc SINE Alu -16 293 1 318 327 88 56 chr17 24206569 24206820 -65297733 - MLT1J2 LTR MaLR -1 449 191 248 329 120 6 chr17 24206958 24207125 -65297428 + L2 LINE L2 2807 2992 -280 299 207 0 0 chr17 24207127 24207185 -65297368 + (CCCA)n Simple_repeat Simple_repeat 3 60 0 839 204 8 4 chr17 24207186 24207723 -65296830 + (TCCA)n Simple_repeat Simple_repeat 1 539 0 236 286 0 0 chr17 24207724 24207780 -65296773 + (CCCA)n Simple_repeat Simple_repeat 2 57 0 803 192 6 0 chr17 24207781 24207958 -65296595 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1480 241 48 38 chr17 24207972 24208449 -65296104 - L2 LINE L2 -3 3310 2829 259 237 21 0 chr17 24209242 24209335 -65295218 + (TCCA)n Simple_repeat Simple_repeat 4 98 0 247 294 72 33 chr17 24209735 24209915 -65294638 + LTR33A LTR ERVL 335 521 -2 381 348 24 20 chr17 24210223 24210488 -65294065 + ERVL LTR ERVL 384 628 -5026 209 289 99 28 chr17 24210777 24210899 -65293654 + MIR SINE MIR 77 212 -50 2357 79 3 3 chr17 24210899 24211189 -65293364 + AluSx SINE Alu 1 290 -22 209 289 99 28 chr17 24211189 24211208 -65293345 + MIR SINE MIR 212 228 -34 1342 83 22 0 chr17 24212810 24212990 -65291563 + AluSg/x SINE Alu 115 298 -14 21 36 0 0 chr17 24214317 24214345 -65290208 + GC_rich Low_complexity Low_complexity 1 28 0 1133 155 5 10 chr17 24217132 24217332 -65287221 - MER3 DNA MER1_type -10 199 1 473 223 121 18 chr17 24218751 24218852 -65285701 + MER3 DNA MER1_type 1 90 -119 1892 160 3 7 chr17 24218852 24219158 -65285395 - AluJb SINE Alu -7 305 1 473 223 121 18 chr17 24219158 24219222 -65285331 + MER3 DNA MER1_type 90 183 -26 309 283 38 9 chr17 24219255 24219402 -65285151 - MIR SINE MIR -66 142 34 201 322 167 0 chr17 24219831 24219921 -65284632 - L2 LINE L2 -9 3304 3200 360 256 93 8 chr17 24220322 24220349 -65284204 - L1ME4a LINE L1 -2 6119 6096 2602 57 0 0 chr17 24220349 24220648 -65283905 + AluY SINE Alu 1 299 -12 360 256 93 8 chr17 24220648 24220736 -65283817 - L1ME4a LINE L1 -25 6096 5990 2327 101 3 0 chr17 24220736 24221034 -65283519 - AluSq SINE Alu -14 299 1 360 256 93 8 chr17 24221034 24221046 -65283507 - L1ME4a LINE L1 -131 5990 5980 2074 133 7 0 chr17 24221107 24221392 -65283161 - AluSx SINE Alu -25 287 1 1177 242 77 3 chr17 24221455 24221781 -65282772 + L1MB8 LINE L1 5825 6174 -4 1983 136 58 0 chr17 24221820 24222115 -65282438 + AluSq SINE Alu 1 312 -1 1951 159 20 3 chr17 24222123 24222425 -65282128 + AluSg SINE Alu 1 307 -3 3540 140 31 25 chr17 24222425 24223109 -65281444 + L1MB3 LINE L1 5496 6183 0 2394 107 3 0 chr17 24224182 24224490 -65280063 - AluSx SINE Alu -3 309 1 201 74 0 0 chr17 24224492 24224519 -65280034 + (T)n Simple_repeat Simple_repeat 1 27 0 210 71 0 0 chr17 24224663 24224691 -65279862 + (A)n Simple_repeat Simple_repeat 1 28 0 1893 132 73 0 chr17 24224918 24225207 -65279346 - AluSx SINE Alu -2 310 1 1795 122 20 56 chr17 24226709 24227013 -65277540 + AluJb SINE Alu 1 293 -19 2349 88 3 25 chr17 24229284 24229601 -65274952 - AluSg SINE Alu 0 310 1 1289 86 77 32 chr17 24231254 24231474 -65273079 + MER30 DNA MER1_type 1 230 0 1872 151 14 0 chr17 24231605 24231908 -65272645 - AluSx SINE Alu 0 307 1 1696 184 3 27 chr17 24232881 24233180 -65271373 + AluJb SINE Alu 1 292 -20 1704 122 118 0 chr17 24233180 24233442 -65271111 - AluSx SINE Alu -19 293 1 473 241 72 24 chr17 24234399 24234565 -65269988 - MER113 DNA MER1_type? -147 374 201 1025 113 19 50 chr17 24234781 24234941 -65269612 + AluSp SINE Alu 135 289 -24 2154 91 53 0 chr17 24234943 24235228 -65269325 + AluY SINE Alu 1 300 -11 392 113 0 0 chr17 24235232 24235285 -65269268 + Alu SINE Alu 1 53 -250 207 69 0 0 chr17 24235291 24235320 -65269233 + (A)n Simple_repeat Simple_repeat 1 29 0 2378 90 0 13 chr17 24236093 24236405 -65268148 + AluSg SINE Alu 1 308 -2 1936 162 7 0 chr17 24238459 24238755 -65265798 - AluJo SINE Alu -14 298 1 490 168 126 0 chr17 24240048 24240143 -65264410 - FLAM_A SINE Alu -35 107 1 797 144 97 166 chr17 24240167 24240487 -65264066 + L1MC4 LINE L1 7744 8041 -1 2352 60 3 26 chr17 24240491 24240827 -65263726 + AluY SINE Alu 1 311 0 441 226 0 0 chr17 24240933 24241079 -65263474 + G-rich Low_complexity Low_complexity 1 146 0 316 264 62 98 chr17 24241292 24241402 -65263151 - L1ME4a LINE L1 -49 6072 5960 2413 81 0 28 chr17 24241402 24241722 -65262831 - AluY SINE Alu 0 311 1 594 222 6 53 chr17 24241722 24241893 -65262660 - FRAM SINE Alu -2 164 2 316 264 62 98 chr17 24241893 24241974 -65262579 - L1ME4a LINE L1 -159 5962 5887 198 428 14 0 chr17 24242788 24242926 -65261627 - MIR SINE MIR -33 229 90 326 191 53 38 chr17 24243045 24243078 -65261475 - L1MC4 LINE L1 -31 8011 7980 2324 112 0 0 chr17 24243078 24243374 -65261179 + AluSq SINE Alu 1 296 -17 326 191 53 38 chr17 24243374 24243471 -65261082 - L1MC4 LINE L1 -62 7980 7879 215 331 24 48 chr17 24243539 24243663 -65260890 - MIR SINE MIR -98 164 44 296 283 140 49 chr17 24243927 24244239 -65260314 + L1MC4a LINE L1 5671 6015 -106 456 310 38 0 chr17 24244321 24244479 -65260074 - MIR SINE MIR -81 181 18 6325 196 108 68 chr17 24245550 24246377 -65258176 + L1M3 LINE L1 3044 3837 -2343 840 101 0 36 chr17 24246377 24246515 -65258038 + AluJo/FLAM SINE Alu 1 133 -169 2402 87 3 7 chr17 24246517 24246826 -65257727 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 24246826 24247378 -65257175 + L1M3 LINE L1 3837 4366 -1814 928 174 214 86 chr17 24247378 24247680 -65256873 + MSTD LTR MaLR 1 356 -40 1700 213 3 0 chr17 24247680 24247990 -65256563 + AluJo SINE Alu 1 311 -1 928 174 214 86 chr17 24247990 24248038 -65256515 + MSTD LTR MaLR 356 396 0 6325 196 108 68 chr17 24248038 24248693 -65255860 + L1M3 LINE L1 4366 4994 -1186 2265 119 0 3 chr17 24248693 24248996 -65255557 + AluSc SINE Alu 1 302 -7 2424 88 3 3 chr17 24248999 24249307 -65255246 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 24249307 24249452 -65255101 + L1M3 LINE L1 4995 5133 -1047 2099 130 3 13 chr17 24249452 24249751 -65254802 - AluSx SINE Alu -16 296 1 6325 196 108 68 chr17 24249751 24249854 -65254699 + L1M3 LINE L1 5133 5440 -740 1527 158 19 31 chr17 24249854 24250113 -65254440 + AluJo SINE Alu 42 297 -15 2185 105 21 0 chr17 24250123 24250408 -65254145 + AluSx SINE Alu 11 301 -11 266 226 0 0 chr17 24251657 24251719 -65252834 - MLT1K LTR MaLR -13 575 514 190 196 29 214 chr17 24252234 24252407 -65252146 + MIR SINE MIR 95 235 -27 1897 179 3 3 chr17 24252455 24252746 -65251807 - AluJo SINE Alu -21 291 1 1891 163 3 3 chr17 24252777 24253060 -65251493 + AluJo SINE Alu 1 283 -29 1722 139 53 7 chr17 24253227 24253508 -65251045 + AluJb SINE Alu 1 294 -18 1886 154 37 0 chr17 24253559 24253857 -65250696 - AluJb SINE Alu -3 309 1 186 224 35 17 chr17 24256191 24256249 -65248304 + MIR SINE MIR 174 232 -30 196 250 91 23 chr17 24256346 24256434 -65248119 + L2 LINE L2 3153 3246 -26 313 270 11 11 chr17 24256905 24256994 -65247559 + Charlie8 DNA MER1_type 34 122 -2295 231 36 0 0 chr17 24257048 24257076 -65247477 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 279 318 73 11 chr17 24259916 24260095 -65244458 + MIR SINE MIR 8 197 -65 1981 172 0 0 chr17 24260843 24261146 -65243407 + AluJb SINE Alu 1 303 -9 2147 95 49 0 chr17 24263577 24263862 -65240691 - AluSg SINE Alu -11 299 1 1644 158 68 4 chr17 24263891 24264170 -65240383 + AluJo SINE Alu 4 300 -12 284 212 15 30 chr17 24264495 24264561 -65239992 - MARNA DNA Mariner -387 199 135 384 266 46 17 chr17 24264670 24264843 -65239710 - L2 LINE L2 0 3313 3136 1955 142 0 10 chr17 24265185 24265481 -65239072 + AluJo SINE Alu 6 298 -14 1605 169 0 0 chr17 24265523 24265765 -65238788 + AluJb SINE Alu 1 242 -70 2371 83 6 13 chr17 24266284 24266598 -65237955 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 24266635 24266657 -65237896 + AT_rich Low_complexity Low_complexity 1 22 0 645 253 93 27 chr17 24267905 24268130 -65236423 - L1M4c LINE L1 -4594 1790 1551 5729 151 44 2 chr17 24268132 24269124 -65235429 - L1MC1 LINE L1 0 6613 5573 2247 96 0 26 chr17 24269126 24269438 -65235115 - AluSg SINE Alu -6 304 1 1048 111 7 0 chr17 24269438 24269573 -65234980 - AluSq/x SINE Alu -176 136 1 6233 223 73 63 chr17 24269577 24269627 -65234926 - L1MC1 LINE L1 -846 5580 5532 1693 166 42 7 chr17 24269627 24269911 -65234642 - AluJb SINE Alu -8 304 11 6233 223 73 63 chr17 24269911 24269957 -65234596 - L1MC1 LINE L1 -894 5532 5488 2338 94 0 28 chr17 24269957 24270275 -65234278 + AluSg SINE Alu 1 309 -1 6233 223 73 63 chr17 24270275 24271556 -65232997 - L1MC1 LINE L1 -938 5488 4220 1140 174 38 2 chr17 24271556 24271792 -65232761 - AluJb SINE Alu -19 293 1 6233 223 73 63 chr17 24271792 24271804 -65232749 - L1MC1 LINE L1 -2206 4220 4210 1608 191 17 7 chr17 24271804 24272097 -65232456 - AluJo SINE Alu -16 296 1 6233 223 73 63 chr17 24272097 24272582 -65231971 - L1MC1 LINE L1 -2216 4210 3731 2236 120 7 0 chr17 24272582 24272881 -65231672 - AluSq SINE Alu -12 301 1 2126 125 3 13 chr17 24272883 24273188 -65231365 - AluSx SINE Alu -10 302 1 6233 223 73 63 chr17 24273188 24275187 -65229366 - L1MC1 LINE L1 -2695 3731 1534 2120 127 0 7 chr17 24275187 24275486 -65229067 - AluSq SINE Alu -16 297 1 6233 223 73 63 chr17 24275486 24275611 -65228942 - L1MC1 LINE L1 -4892 1534 1412 1272 179 93 45 chr17 24275623 24275936 -65228617 + MLT1A1 LTR MaLR 1 328 -37 7228 149 42 34 chr17 24275948 24277017 -65227536 - L1MC1 LINE L1 -5034 1392 332 2278 157 45 29 chr17 24277017 24277057 -65227496 - MSTA LTR MaLR 0 428 390 1904 172 0 0 chr17 24277057 24277359 -65227194 + AluJb SINE Alu 1 302 -10 2278 157 45 29 chr17 24277359 24277739 -65226814 - MSTA LTR MaLR -38 390 1 7228 149 42 34 chr17 24277739 24277979 -65226574 - L1MC1 LINE L1 -6094 332 70 2214 97 3 32 chr17 24277979 24278287 -65226266 - AluSg1 SINE Alu -10 299 1 7228 149 42 34 chr17 24278287 24278341 -65226212 - L1MC1 LINE L1 -6356 70 18 651 213 52 30 chr17 24278352 24278546 -65226007 - L1M4c LINE L1 -4728 2229 1928 679 209 6 70 chr17 24278547 24278705 -65225848 + MLT1D LTR MaLR 1 148 -357 555 197 150 8 chr17 24278691 24278818 -65225735 + MLT1D LTR MaLR 341 485 -20 * 365 236 34 115 chr17 24278830 24278887 -65225666 - L1M4c LINE L1 -6655 204 144 2202 101 0 7 chr17 24278887 24279175 -65225378 - AluSx SINE Alu -24 288 3 365 236 34 115 chr17 24279175 24279325 -65225228 - L1M4c LINE L1 -6715 144 14 882 112 0 77 chr17 24279391 24279534 -65225019 - FLAM_C SINE Alu 0 133 2 4908 210 42 51 chr17 24279542 24280752 -65223801 - L1M1 LINE L1 -3957 3608 2412 2037 115 27 7 chr17 24280752 24281047 -65223506 - AluSx SINE Alu -11 301 1 4908 210 42 51 chr17 24281047 24281285 -65223268 - L1M1 LINE L1 -5153 2412 2173 817 189 0 0 chr17 24281297 24281429 -65223124 + FLAM_C SINE Alu 1 132 -11 672 197 0 23 chr17 24281440 24281572 -65222981 - AluJo SINE Alu -177 135 7 3298 160 42 0 chr17 24281605 24282131 -65222422 - L1M1 LINE L1 -4777 1788 1241 473 256 96 6 chr17 24282925 24283081 -65221472 + MIR SINE MIR 34 203 -59 1675 188 28 0 chr17 24283081 24283368 -65221185 - AluJb SINE Alu 0 312 18 2202 129 28 3 chr17 24283573 24283930 -65220623 - MER47A DNA MER2_type 0 366 1 2341 87 0 3 chr17 24284172 24284470 -65220083 - AluY SINE Alu -14 297 1 21 0 0 0 chr17 24284668 24284689 -65219864 + AT_rich Low_complexity Low_complexity 1 21 0 2178 122 0 0 chr17 24284689 24284977 -65219576 - AluSx SINE Alu -24 288 1 199 250 94 0 chr17 24285168 24285232 -65219321 + MIR SINE MIR 82 151 -57 1007 100 8 0 chr17 24286156 24286286 -65218267 + AluSq/x SINE Alu 6 136 -177 2186 123 7 0 chr17 24286286 24286587 -65217966 + AluSx SINE Alu 1 303 -9 226 181 403 0 chr17 24286612 24286684 -65217869 + MER4A LTR ERV1 1 101 -563 * 1605 115 7 147 chr17 24286683 24287015 -65217538 + MER4A LTR ERV1 263 590 -74 2774 143 50 23 chr17 24287015 24287492 -65217061 + LTR2B LTR ERV1 1 490 0 1605 115 7 147 chr17 24287492 24287558 -65216995 + MER4A LTR ERV1 590 664 0 2490 104 147 27 chr17 24287561 24288082 -65216471 + LTR2B-int LTR ERV1 1 628 -5970 5222 124 82 29 chr17 24288082 24288967 -65215586 + MER4A-int LTR ERV1 215 1146 -5612 540 0 0 0 chr17 24288973 24289033 -65215520 + (TG)n Simple_repeat Simple_repeat 2 61 0 2502 105 132 19 chr17 24289044 24289201 -65215352 + MER4A-int LTR ERV1 1798 1936 -4662 2220 82 41 0 chr17 24289201 24289493 -65215060 + AluY SINE Alu 1 304 -7 2502 105 132 19 chr17 24289493 24289813 -65214740 + MER4A-int LTR ERV1 1936 2329 -4269 2278 84 0 17 chr17 24290126 24290422 -65214131 - AluY SINE Alu -20 291 1 2070 133 3 0 chr17 24290428 24290729 -65213824 - AluSc SINE Alu -3 306 5 304 288 114 15 chr17 24290747 24290879 -65213674 - MIR SINE MIR -71 191 47 447 185 11 11 chr17 24291010 24291102 -65213451 - AluSp/q SINE Alu -10 303 212 1972 146 11 0 chr17 24291371 24291685 -65212868 + AluSx SINE Alu 1 317 0 1970 123 34 0 chr17 24291691 24291983 -65212570 + AluSx SINE Alu 1 302 -10 2503 41 7 10 chr17 24292120 24292415 -65212138 + AluY SINE Alu 1 294 -17 808 151 17 0 chr17 24292541 24292691 -65211862 + FRAM SINE Alu 26 177 0 373 174 14 0 chr17 24292705 24292774 -65211779 + LTR24B-int LTR ERV1 5054 5123 0 1333 222 47 102 chr17 24292774 24292970 -65211583 + LTR24B LTR ERV1 1 206 -370 2288 98 13 0 chr17 24292970 24293277 -65211276 - AluSp SINE Alu -2 311 1 1333 222 47 102 chr17 24293277 24293319 -65211234 + LTR24B LTR ERV1 206 249 -327 2109 146 0 0 chr17 24293319 24293627 -65210926 + AluJb SINE Alu 1 308 -4 1333 222 47 102 chr17 24293627 24294005 -65210548 + LTR24B LTR ERV1 249 576 0 280 275 38 69 chr17 24294322 24294482 -65210071 + MLT1I LTR MaLR 130 284 -125 2533 52 10 3 chr17 24294615 24294920 -65209633 - AluY SINE Alu -4 307 1 503 258 59 50 chr17 24294956 24295177 -65209376 - L1MC4a LINE L1 -1918 5890 5668 2153 168 33 32 chr17 24295177 24295727 -65208826 - MLT2A2 LTR ERVL 0 554 1 1266 228 53 41 chr17 24296006 24296348 -65208205 - MLT1I LTR MaLR 0 409 64 200 368 18 0 chr17 24296499 24296613 -65207940 + L2 LINE L2 2274 2389 -925 1705 163 3 39 chr17 24296785 24297092 -65207461 + AluJb SINE Alu 1 296 -16 180 0 0 0 chr17 24297094 24297114 -65207439 + (CA)n Simple_repeat Simple_repeat 2 21 0 1636 131 0 29 chr17 24298101 24298345 -65206208 + AluSx SINE Alu 38 274 -38 510 17 0 0 chr17 24298400 24298459 -65206094 + (TG)n Simple_repeat Simple_repeat 2 60 0 657 210 90 24 chr17 24298788 24298955 -65205598 + MER3 DNA MER1_type 28 205 -4 2040 121 3 13 chr17 24299162 24299467 -65205086 + AluSx SINE Alu 1 302 -10 777 272 48 41 chr17 24299628 24299800 -65204753 - L1MEc LINE L1 -4112 2149 1980 2032 137 3 3 chr17 24299800 24300092 -65204461 + AluJb SINE Alu 1 292 -20 777 272 48 41 chr17 24300092 24300335 -65204218 - L1MEc LINE L1 -4281 1980 1731 1149 291 106 39 chr17 24300347 24300425 -65204128 - L1MEc LINE L1 -4605 1656 1585 1723 155 69 0 chr17 24300425 24300715 -65203838 - AluSx SINE Alu -2 310 1 1149 291 106 39 chr17 24300715 24300902 -65203651 - L1MEc LINE L1 -4676 1585 1412 731 11 0 0 chr17 24300902 24300991 -65203562 - L1PB1 LINE L1 0 6151 6063 2225 96 3 35 chr17 24300995 24301309 -65203244 - AluSx SINE Alu -8 304 1 1149 291 106 39 chr17 24301309 24301782 -65202771 - L1MEc LINE L1 -4851 1410 862 1294 164 0 36 chr17 24301789 24302014 -65202539 - AluJb SINE Alu -11 301 85 925 124 0 0 chr17 24302016 24302145 -65202408 - AluJo/FLAM SINE Alu -173 129 1 1883 273 61 38 chr17 24302145 24302341 -65202212 - L1MEc LINE L1 -5242 828 638 2272 91 3 3 chr17 24302341 24302628 -65201925 + AluSp SINE Alu 1 287 -26 1883 273 61 38 chr17 24302628 24303222 -65201331 - L1MEc LINE L1 -5432 638 20 2455 50 3 0 chr17 24303382 24303665 -65200888 + AluY SINE Alu 1 308 0 184 42 0 0 chr17 24303665 24303689 -65200864 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2084 139 0 0 chr17 24303895 24304182 -65200371 - AluSx SINE Alu -15 297 11 2049 91 65 7 chr17 24304186 24304461 -65200092 - AluY SINE Alu -20 291 1 31 0 0 0 chr17 24304461 24304492 -65200061 + AT_rich Low_complexity Low_complexity 1 31 0 676 268 36 27 chr17 24304568 24304792 -65199761 - MIR SINE MIR 0 262 37 1055 164 5 46 chr17 24305160 24305355 -65199198 - AluJb SINE Alu -44 268 82 294 272 48 13 chr17 24305355 24305539 -65199014 - L1MC/D LINE L1 -297 5824 5631 874 154 7 0 chr17 24305924 24306060 -65198493 - AluJb SINE Alu -16 296 160 730 244 49 125 chr17 24306084 24306168 -65198385 - L2 LINE L2 -26 3287 3198 2002 99 6 93 chr17 24306168 24306502 -65198051 + AluSx SINE Alu 1 305 -7 730 244 49 125 chr17 24306502 24306826 -65197727 - L2 LINE L2 -115 3198 2910 453 205 181 44 chr17 24307177 24307382 -65197171 + Charlie5 DNA MER1_type 2368 2600 -12 1942 106 14 0 chr17 24308121 24308403 -65196150 + AluSg SINE Alu 9 294 -16 260 238 32 16 chr17 24308531 24308594 -65195959 + CT-rich Low_complexity Low_complexity 4 67 0 1434 159 103 28 chr17 24309078 24309368 -65195185 - AluJo SINE Alu 0 312 1 283 167 100 17 chr17 24309412 24309472 -65195081 + AluJ/FRAM SINE Alu 226 290 -12 2038 98 51 4 chr17 24309719 24309995 -65194558 - AluSp SINE Alu -24 289 1 991 211 0 5 chr17 24310041 24310254 -65194299 + AluSc SINE Alu 2 213 -96 1289 114 6 0 chr17 24310614 24310789 -65193764 - AluSg/x SINE Alu 0 312 137 276 203 0 16 chr17 24310793 24310857 -65193696 + MLT1C LTR MaLR 405 467 0 230 276 9 29 chr17 24311168 24311273 -65193280 + L1MC5 LINE L1 7383 7485 -476 2115 132 0 3 chr17 24311377 24311672 -65192881 + AluSx SINE Alu 1 294 -18 537 192 165 50 chr17 24311807 24312068 -65192485 + pTR5 LTR ERV1 738 1028 -1410 4268 150 79 37 chr17 24312147 24313025 -65191528 + pTR5 LTR ERV1 1 2438 0 342 236 69 56 chr17 24313032 24313154 -65191399 + L1MDa LINE L1 1774 1900 -4640 2126 140 0 13 chr17 24313154 24313462 -65191091 - AluSx SINE Alu -8 304 1 342 236 69 56 chr17 24313462 24313483 -65191070 + L1MDa LINE L1 1900 1919 -4621 2181 129 3 0 chr17 24313500 24313794 -65190759 + AluSx SINE Alu 1 295 -17 29 47 0 0 chr17 24313805 24313848 -65190705 + AT_rich Low_complexity Low_complexity 1 43 0 353 330 26 0 chr17 24313853 24313968 -65190585 + L1MDa LINE L1 1948 2065 -4475 662 162 0 0 chr17 24313975 24314074 -65190479 + AluJ/FLAM SINE Alu 2 100 -212 1461 185 0 23 chr17 24314075 24314334 -65190219 + AluJb SINE Alu 41 293 -19 832 228 114 43 chr17 24314338 24314491 -65190062 + L1M4 LINE L1 4739 4880 -1266 1550 161 77 32 chr17 24314491 24314776 -65189777 + AluJb SINE Alu 1 298 -14 2192 111 7 0 chr17 24314778 24315066 -65189487 + AluSq SINE Alu 3 292 -21 832 228 114 43 chr17 24315066 24315392 -65189161 + L1M4 LINE L1 4880 5255 -891 2114 117 19 64 chr17 24315394 24315956 -65188597 - MER51A LTR ERV1 0 634 1 3880 146 27 19 chr17 24315956 24316936 -65187617 - L1M2 LINE L1 -647 5644 4663 2235 100 0 27 chr17 24316936 24317236 -65187317 - AluSq SINE Alu -18 295 4 3880 146 27 19 chr17 24317236 24317289 -65187264 - L1M2 LINE L1 -1628 4663 4612 2754 156 55 6 chr17 24317289 24317776 -65186777 + MER9 LTR ERVK 1 511 0 11632 130 41 42 chr17 24317776 24318783 -65185770 + HERVK9 LTR ERVK 1 1008 -4937 188 228 0 88 chr17 24318783 24318840 -65185713 + MER5B DNA MER1_type 58 109 -69 11632 130 41 42 chr17 24318840 24320033 -65184520 + HERVK9 LTR ERVK 1008 2253 -3692 1719 188 88 21 chr17 24320079 24320510 -65184043 - MLT1C LTR MaLR -7 460 1 830 187 39 7 chr17 24320745 24320900 -65183653 - AluJb SINE Alu -11 301 142 2395 191 18 107 chr17 24321123 24321777 -65182776 - MER77 LTR ERV1 -9 596 1 346 286 40 0 chr17 24321978 24322104 -65182449 + L2 LINE L2 2887 3017 -296 261 176 12 106 chr17 24322432 24322517 -65182036 + MLT1J LTR MaLR 1 77 -434 2145 107 3 30 chr17 24322606 24322904 -65181649 + AluSp SINE Alu 1 290 -23 525 177 8 15 chr17 24322909 24323039 -65181514 + GA-rich Low_complexity Low_complexity 4 132 0 553 197 24 0 chr17 24323063 24323190 -65181363 + MLT1J-int LTR MaLR 1242 1371 0 334 166 0 2 chr17 24323227 24323291 -65181262 + MLT1D LTR MaLR 400 500 -5 1518 250 37 21 chr17 24323361 24323797 -65180756 - LTR47B LTR ERVL 0 443 1 2151 102 0 36 chr17 24323836 24324141 -65180412 + AluSg SINE Alu 1 294 -16 1948 161 0 3 chr17 24324218 24324510 -65180043 + AluJo SINE Alu 1 291 -21 351 288 0 52 chr17 24324523 24324676 -65179877 + MLT1J LTR MaLR 115 259 -252 237 216 16 112 chr17 24324756 24324881 -65179672 + MLT1J LTR MaLR 392 504 -7 415 250 155 0 chr17 24325181 24325329 -65179224 - MER112 DNA MER1_type -9 251 81 667 202 91 66 chr17 24325330 24325536 -65179017 - MER2 DNA MER2_type 0 345 130 2060 116 3 11 chr17 24325536 24325854 -65178699 + AluSx SINE Alu 1 316 0 667 202 91 66 chr17 24325854 24325889 -65178664 - MER2 DNA MER2_type -215 130 97 240 242 170 52 chr17 24326099 24326252 -65178301 - MIR3 SINE MIR -20 188 18 1210 202 131 18 chr17 24326666 24327002 -65177551 - MLT1D LTR MaLR -7 498 125 285 203 51 0 chr17 24327029 24327088 -65177465 - MLT1D LTR MaLR -442 63 2 1702 164 6 53 chr17 24327226 24327549 -65177004 + AluJo SINE Alu 2 309 -3 705 223 159 116 chr17 24327828 24328132 -65176421 - L2 LINE L2 -185 3128 2838 393 22 0 0 chr17 24328132 24328178 -65176375 + (TG)n Simple_repeat Simple_repeat 1 46 0 705 223 159 116 chr17 24328178 24328219 -65176334 - L2 LINE L2 -475 2838 2800 2335 96 0 3 chr17 24328219 24328520 -65176033 - AluSg SINE Alu -10 300 1 705 223 159 116 chr17 24328520 24328556 -65175997 - L2 LINE L2 -513 2800 2767 2294 147 75 14 chr17 24328556 24328961 -65175592 - L1MB5 LINE L1 0 6174 5742 2415 77 3 0 chr17 24328961 24329259 -65175294 - AluSp SINE Alu -14 299 1 705 223 159 116 chr17 24329269 24329484 -65175069 - L2 LINE L2 -546 2767 2500 248 314 14 0 chr17 24330439 24330509 -65174044 + MIR SINE MIR 82 152 -110 180 346 0 0 chr17 24330529 24330581 -65173972 + L2 LINE L2 3239 3290 -23 1500 199 26 24 chr17 24330691 24331132 -65173421 + LTR2B LTR ERV1 1 490 0 766 190 95 71 chr17 24331144 24331169 -65173384 - MIR SINE MIR -26 236 213 1939 144 10 19 chr17 24331169 24331482 -65173071 - AluSx SINE Alu 0 312 3 766 190 95 71 chr17 24331482 24331667 -65172886 - MIR SINE MIR -49 213 21 287 100 0 0 chr17 24331667 24331734 -65172819 - Alu SINE Alu 0 300 234 2040 124 0 0 chr17 24331734 24332007 -65172546 - AluSx SINE Alu -26 286 14 293 331 31 16 chr17 24332392 24332519 -65172034 + MIR SINE MIR 84 212 -50 2136 123 0 0 chr17 24332534 24332850 -65171703 + AluSq SINE Alu 1 316 0 2312 108 0 0 chr17 24333011 24333306 -65171247 + AluSg SINE Alu 1 295 -15 424 225 268 0 chr17 24333569 24333711 -65170842 + MER5A DNA MER1_type 4 183 -6 432 249 41 45 chr17 24333719 24333940 -65170613 + LTR37B LTR ERV1 249 468 0 372 286 14 34 chr17 24334023 24334170 -65170383 + LTR67 LTR ERVL 23 166 -391 612 175 0 18 chr17 24334286 24334400 -65170153 - FLAM_C SINE Alu 0 143 32 292 200 31 0 chr17 24334401 24334466 -65170087 + MER52A LTR ERV1 1 67 -1688 7958 176 66 42 chr17 24334947 24336596 -65167957 + MER52A LTR ERV1 68 1755 0 1096 141 0 0 chr17 24336659 24336872 -65167681 - AluSg/x SINE Alu 0 346 134 2221 92 0 4 chr17 24336872 24337153 -65167400 - AluSc SINE Alu -20 289 10 1241 120 0 6 chr17 24337153 24337320 -65167233 - AluSx SINE Alu -146 166 1 1301 180 16 8 chr17 24337954 24338199 -65166354 + AluJo SINE Alu 64 310 -2 599 316 42 81 chr17 24338220 24338650 -65165903 + L1MC4 LINE L1 7628 8040 -2 1042 224 138 26 chr17 24338684 24339067 -65165486 + LTR42 LTR ERVL 1 426 -69 2469 58 0 3 chr17 24339285 24339577 -65164976 + AluY SINE Alu 1 291 -20 215 256 55 30 chr17 24339877 24340041 -65164512 + (CCCCAG)n Simple_repeat Simple_repeat 1 168 0 377 278 4 34 chr17 24340305 24340563 -65163990 + G-rich Low_complexity Low_complexity 1 250 0 27 0 0 0 chr17 24340817 24340844 -65163709 + GC_rich Low_complexity Low_complexity 1 27 0 2207 126 0 7 chr17 24341231 24341533 -65163020 - AluSx SINE Alu -12 300 1 1244 147 119 162 chr17 24341686 24341804 -65162749 - LTR65 LTR ERV1 -14 655 533 2256 58 25 0 chr17 24341804 24342109 -65162444 - AluY SINE Alu 0 312 1 1244 147 119 162 chr17 24342109 24342316 -65162237 - LTR65 LTR ERV1 -136 533 355 2000 85 0 0 chr17 24342316 24342595 -65161958 - AluY SINE Alu 0 314 36 1244 147 119 162 chr17 24342595 24342771 -65161782 - LTR65 LTR ERV1 -314 355 173 2128 111 24 0 chr17 24343362 24343651 -65160902 - AluSx SINE Alu -16 296 1 2432 63 0 23 chr17 24344025 24344328 -65160225 + AluY SINE Alu 1 296 -15 2429 82 3 0 chr17 24344341 24344635 -65159918 + AluSp SINE Alu 1 295 -18 713 186 0 7 chr17 24344638 24344778 -65159775 + MER3 DNA MER1_type 31 122 -87 291 162 73 0 chr17 24344786 24344854 -65159699 + MER3 DNA MER1_type 2234 2306 0 1528 254 30 98 chr17 24344917 24345695 -65158858 - L1MEc LINE L1 -5368 1028 304 343 238 36 0 chr17 24345721 24345805 -65158748 + MER81 DNA DNA 2 88 -26 2355 87 3 0 chr17 24345941 24346229 -65158324 - AluSg SINE Alu -21 289 1 1137 107 17 0 chr17 24346229 24346407 -65158146 + MER4A-int LTR ERV1 2315 2495 -4103 1214 145 107 8 chr17 24346407 24346641 -65157912 - LTR8 LTR ERV1 -434 257 1 2617 88 68 53 chr17 24346641 24347101 -65157452 + MER4A-int LTR ERV1 2737 3208 -3390 2339 89 0 22 chr17 24347101 24347414 -65157139 + AluY SINE Alu 2 307 -4 2617 88 68 53 chr17 24347414 24347485 -65157068 + MER4A-int LTR ERV1 3208 3276 -3322 279 0 0 0 chr17 24347490 24347521 -65157032 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 31 0 0 chr17 24347521 24347547 -65157006 + (TA)n Simple_repeat Simple_repeat 2 27 0 890 111 0 0 chr17 24347614 24347731 -65156822 + AluY SINE Alu 24 140 -171 2155 97 32 32 chr17 24347732 24347866 -65156687 + AluY SINE Alu 1 134 -177 2387 91 3 0 chr17 24347866 24348162 -65156391 + AluSp SINE Alu 1 297 -16 2155 97 32 32 chr17 24348162 24348336 -65156217 + AluY SINE Alu 133 309 -2 2049 143 0 28 chr17 24348343 24348664 -65155889 + AluSx SINE Alu 1 312 0 2178 112 0 14 chr17 24348767 24349082 -65155471 + AluSx SINE Alu 1 311 0 809 110 18 0 chr17 24349092 24349201 -65155352 - AluSp/q SINE Alu -10 303 193 15431 88 69 21 chr17 24349205 24349305 -65155248 + MER4A-int LTR ERV1 3987 4081 -2517 2341 96 7 10 chr17 24349305 24349606 -65154947 - AluSq SINE Alu -13 300 1 15431 88 69 21 chr17 24349606 24351995 -65152558 + MER4A-int LTR ERV1 4081 6596 -2 281 97 375 14 chr17 24352003 24352075 -65152478 + MER4A LTR ERV1 1 98 -566 1844 132 3 41 chr17 24352075 24352433 -65152120 + MER4A LTR ERV1 261 664 0 546 324 124 9 chr17 24352470 24352695 -65151858 - MIR SINE MIR 0 262 12 1881 149 28 101 chr17 24352813 24353062 -65151491 + MER57A LTR ERV1 1 208 -195 1945 155 13 7 chr17 24353062 24353241 -65151312 - AluJo SINE Alu 0 312 129 198 91 0 0 chr17 24353241 24353274 -65151279 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 1945 155 13 7 chr17 24353274 24353404 -65151149 - AluJo SINE Alu -183 129 1 1881 149 28 101 chr17 24353404 24353578 -65150975 + MER57A LTR ERV1 208 393 -10 4477 112 8 0 chr17 24353921 24354545 -65150008 + MER41B LTR ERV1 7 635 0 1515 176 73 147 chr17 24354926 24355204 -65149349 + MER67C LTR ERV1 8 305 -405 2003 94 33 0 chr17 24355204 24355507 -65149046 - AluSx SINE Alu 0 312 1 1515 176 73 147 chr17 24355507 24355886 -65148667 + MER67C LTR ERV1 305 617 -93 1840 162 3 0 chr17 24355888 24356191 -65148362 - AluJo SINE Alu 0 312 9 839 298 70 31 chr17 24356226 24356612 -65147941 + L2 LINE L2 2912 3312 -1 248 0 0 30 chr17 24356679 24356712 -65147841 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2331 58 0 22 chr17 24356728 24356902 -65147651 - AluSq SINE Alu -9 304 139 2133 85 3 10 chr17 24356902 24357207 -65147346 - AluY SINE Alu -8 303 1 2331 58 0 22 chr17 24357207 24357343 -65147210 - AluSq SINE Alu -174 139 1 816 176 14 7 chr17 24357344 24357492 -65147061 - AluJb SINE Alu -31 281 133 502 247 88 6 chr17 24357492 24357662 -65146891 + MIR SINE MIR 79 262 0 643 285 61 11 chr17 24357903 24358145 -65146408 - MIR SINE MIR -8 254 6 1003 283 99 11 chr17 24358881 24359428 -65145125 + L1M4 LINE L1 4698 5292 -854 242 240 77 67 chr17 24359592 24359800 -65144753 - L1MC4a LINE L1 -1746 6062 5853 24 32 0 0 chr17 24359832 24359863 -65144690 + AT_rich Low_complexity Low_complexity 1 31 0 2248 103 4 1 chr17 24359983 24360455 -65144098 + MER51A LTR ERV1 1 634 0 1940 123 10 7 chr17 24360675 24360976 -65143577 + AluSx SINE Alu 1 302 -10 2658 203 92 36 chr17 24361013 24361508 -65143045 + L1MC/D LINE L1 2 542 -5998 2299 90 0 3 chr17 24361508 24361818 -65142735 - AluSc SINE Alu 0 309 1 2658 203 92 36 chr17 24361818 24361961 -65142592 + L1MC/D LINE L1 542 676 -5864 1235 267 59 32 chr17 24361985 24362393 -65142160 - LTR47B LTR ERVL -24 419 1 1601 202 156 3 chr17 24362393 24362784 -65141769 + L1MC/D LINE L1 676 1126 -5414 2291 99 3 0 chr17 24362785 24363097 -65141456 + AluSp SINE Alu 1 313 0 488 219 0 0 chr17 24363121 24363217 -65141336 + AluJ/FLAM SINE Alu 1 96 -216 1338 160 0 61 chr17 24363499 24363793 -65140760 + AluJo SINE Alu 27 302 -10 2821 206 44 61 chr17 24363793 24363961 -65140592 + L1MC/D LINE L1 4715 4884 -1656 1546 156 52 21 chr17 24363961 24364249 -65140304 + AluJb SINE Alu 1 297 -15 2821 206 44 61 chr17 24364249 24364501 -65140052 + L1MC/D LINE L1 4884 5139 -1401 1755 168 0 10 chr17 24364501 24364805 -65139748 - AluJo SINE Alu -11 301 1 2821 206 44 61 chr17 24364805 24365361 -65139192 + L1MC/D LINE L1 5139 5675 -865 816 142 0 17 chr17 24365362 24365482 -65139071 + FLAM_C SINE Alu 1 118 -25 954 164 10 39 chr17 24365497 24365704 -65138849 + L1MC/D LINE L1 5666 5866 -887 1753 142 7 23 chr17 24366511 24366814 -65137739 + AluSx SINE Alu 1 298 -14 297 167 0 0 chr17 24366914 24366968 -65137585 + A-rich Low_complexity Low_complexity 1 54 0 372 174 6 180 chr17 24366979 24367146 -65137407 - MLT1B LTR MaLR -73 317 180 333 256 12 0 chr17 24367199 24367281 -65137272 - MLT1-int LTR MaLR -660 711 629 21 0 0 0 chr17 24367282 24367303 -65137250 + AT_rich Low_complexity Low_complexity 1 21 0 1705 174 0 7 chr17 24367311 24367605 -65136948 + AluJb SINE Alu 1 292 -20 1028 160 105 0 chr17 24367619 24367800 -65136753 - MER51A LTR ERV1 -434 200 1 238 187 42 18 chr17 24367800 24367883 -65136670 + L1ME2 LINE L1 5254 5335 -811 1463 112 48 64 chr17 24367885 24367988 -65136565 + L1MA8 LINE L1 5846 5949 -342 1867 151 3 3 chr17 24367988 24368287 -65136266 + AluJb SINE Alu 1 299 -13 1463 112 48 64 chr17 24368287 24368478 -65136075 + L1MA8 LINE L1 5949 6135 -156 913 223 73 51 chr17 24368449 24368723 -65135830 + L1ME2 LINE L1 5310 5589 -575 * 681 99 0 0 chr17 24368740 24368841 -65135712 - AluSg/x SINE Alu -1 311 211 1797 224 37 20 chr17 24368841 24369300 -65135253 + L1ME2 LINE L1 5582 6048 -116 794 232 16 4 chr17 24369409 24369663 -65134890 - L1M4c LINE L1 -4033 2351 2095 799 302 47 4 chr17 24369676 24369931 -65134622 + ERVL LTR ERVL 5166 5431 -333 48 0 0 0 chr17 24370371 24370419 -65134134 + AT_rich Low_complexity Low_complexity 1 48 0 426 129 0 0 chr17 24370419 24370481 -65134072 - AluS SINE Alu -255 63 2 203 146 24 0 chr17 24370912 24370953 -65133600 + T-rich Low_complexity Low_complexity 2 43 0 43 56 0 0 chr17 24371152 24371223 -65133330 + AT_rich Low_complexity Low_complexity 1 71 0 2016 135 13 0 chr17 24371248 24371551 -65133002 + AluJo SINE Alu 1 307 -5 1981 113 17 3 chr17 24371552 24371844 -65132709 + AluSx SINE Alu 1 296 -16 1916 121 0 56 chr17 24372164 24372336 -65132217 - AluSx SINE Alu -8 304 157 2319 74 3 0 chr17 24372336 24372634 -65131919 - AluSq SINE Alu -14 299 1 1916 121 0 56 chr17 24372634 24372783 -65131770 - AluSx SINE Alu -155 157 1 264 284 199 14 chr17 24372789 24372930 -65131623 - MIR SINE MIR -56 206 40 214 283 0 0 chr17 24372961 24373007 -65131546 - MIR SINE MIR -5 257 212 249 33 0 0 chr17 24373020 24373050 -65131503 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 1214 153 12 68 chr17 24373053 24373302 -65131251 - Tigger2 DNA MER2_type 0 2718 2484 1188 126 0 0 chr17 24373303 24373478 -65131075 + AluJb SINE Alu 137 311 -1 778 87 117 152 chr17 24373479 24373505 -65131048 - Tigger2 DNA MER2_type -205 2513 2488 1916 139 7 0 chr17 24373505 24373806 -65130747 + AluJb SINE Alu 1 303 -9 778 87 117 152 chr17 24373806 24374009 -65130544 - Tigger2 DNA MER2_type -230 2488 2292 362 190 0 0 chr17 24374019 24374077 -65130476 + MER8 DNA MER2_type 182 239 0 205 97 0 0 chr17 24374085 24374116 -65130437 - MIR SINE MIR -73 189 159 1665 183 0 3 chr17 24374196 24374507 -65130046 + AluJo SINE Alu 1 310 -2 2187 94 10 13 chr17 24374726 24375034 -65129519 - AluY SINE Alu -4 307 1 310 195 103 23 chr17 24375130 24375217 -65129336 - MIR SINE MIR -104 158 65 434 296 30 86 chr17 24375402 24375635 -65128918 - L2 LINE L2 -46 3226 3007 1321 191 39 48 chr17 24375673 24375982 -65128571 + AluJo SINE Alu 1 306 -6 2052 130 7 0 chr17 24375982 24376290 -65128263 + AluSx SINE Alu 1 310 -2 1232 238 194 39 chr17 24376346 24376837 -65127716 - MLT1G1 LTR MaLR -28 567 1 2344 75 0 10 chr17 24377036 24377343 -65127210 - AluY SINE Alu -7 304 1 243 224 45 0 chr17 24377664 24377731 -65126822 - MIR SINE MIR -44 218 149 1373 94 35 0 chr17 24377733 24377936 -65126617 - AluSg/x SINE Alu -17 295 86 470 259 107 8 chr17 24377938 24378069 -65126484 - MIR SINE MIR -112 150 7 247 286 71 0 chr17 24378228 24378257 -65126296 - L1ME3 LINE L1 -1 6161 6135 2053 105 0 0 chr17 24378257 24378542 -65126011 + AluSx SINE Alu 12 296 -16 247 286 71 0 chr17 24378542 24378610 -65125943 - L1ME3 LINE L1 -27 6135 6057 * 504 164 170 18 chr17 24378606 24378771 -65125782 + L1ME3 LINE L1 5853 6042 -120 201 147 0 0 chr17 24379005 24379039 -65125514 + (T)n Simple_repeat Simple_repeat 1 34 0 2210 79 6 29 chr17 24379692 24380007 -65124546 - AluSg SINE Alu -2 308 1 949 78 39 0 chr17 24380011 24380139 -65124414 - AluSq/x SINE Alu -180 133 1 2210 87 17 0 chr17 24380696 24380995 -65123558 - AluSp SINE Alu -9 304 1 1727 97 27 85 chr17 24381016 24381347 -65123206 - AluSx SINE Alu 0 312 1 2182 51 0 0 chr17 24381353 24381627 -65122926 - AluY SINE Alu -8 303 30 2413 145 20 2 chr17 24381864 24382258 -65122295 - MER57A LTR ERV1 -2 401 1 1895 135 0 0 chr17 24382459 24382770 -65121783 + AluSx SINE Alu 1 311 0 1558 162 48 14 chr17 24382798 24383088 -65121465 + AluJo SINE Alu 1 300 -12 2318 72 0 26 chr17 24383090 24383397 -65121156 + AluY SINE Alu 1 299 -12 2139 70 3 30 chr17 24383398 24383697 -65120856 + AluY SINE Alu 1 291 -20 2192 87 3 0 chr17 24384068 24384354 -65120199 + AluSx SINE Alu 5 291 -21 23 0 0 0 chr17 24384354 24384377 -65120176 + AT_rich Low_complexity Low_complexity 1 23 0 2400 192 99 48 chr17 24384450 24385055 -65119498 + LTR27 LTR ERV1 1 636 0 2815 92 12 12 chr17 24385060 24385464 -65119089 - MER4A LTR ERV1 0 664 261 677 111 0 10 chr17 24385464 24385563 -65118990 - MER4A LTR ERV1 -566 98 1 2120 60 63 7 chr17 24385709 24385993 -65118560 - AluY SINE Alu -11 300 1 4741 132 74 46 chr17 24386006 24386571 -65117982 - MER4D LTR ERV1 0 903 356 1916 116 53 0 chr17 24386571 24386855 -65117698 - AluSx SINE Alu -12 300 2 4741 132 74 46 chr17 24386855 24387132 -65117421 - MER4D LTR ERV1 -547 356 33 8210 50 16 10 chr17 24387132 24388133 -65116420 - LTR13 LTR ERVK 0 1007 1 4741 132 74 46 chr17 24388133 24388167 -65116386 - MER4D LTR ERV1 -870 33 1 5047 115 34 4 chr17 24388227 24388982 -65115571 + MER4E LTR ERV1 1 778 -1 435 324 24 19 chr17 24388984 24389191 -65115362 + PABL_B-int LTR ERV1 6419 6626 -496 1296 140 63 14 chr17 24389195 24389416 -65115137 + MER4D LTR ERV1 1 232 -671 1050 55 11 44 chr17 24389516 24389698 -65114855 + AluSg/x SINE Alu 124 299 -13 1874 136 13 0 chr17 24389957 24390265 -65114288 - AluJb SINE Alu 0 312 1 27 0 0 0 chr17 24390396 24390423 -65114130 + AT_rich Low_complexity Low_complexity 1 27 0 515 151 47 0 chr17 24390423 24390509 -65114044 - FLAM_C SINE Alu -26 117 28 891 155 53 71 chr17 24390673 24390899 -65113654 - L1MD2 LINE L1 -10 6349 6128 * 6811 221 69 11 chr17 24390897 24392597 -65111956 - L1MC3 LINE L1 -167 7618 5825 2501 52 0 3 chr17 24392597 24392904 -65111649 - AluY SINE Alu -5 306 1 6811 221 69 11 chr17 24392904 24392952 -65111601 - L1MC3 LINE L1 -1960 5825 5781 360 201 19 115 chr17 24392952 24393161 -65111392 - L1MC5 LINE L1 -431 7530 7342 463 198 9 66 chr17 24393645 24393751 -65110802 - Tigger7 DNA MER2_type -1 2490 2391 * 2405 182 53 18 chr17 24393741 24394235 -65110318 - Tigger7 DNA MER2_type -222 511 1 2119 92 7 3 chr17 24394604 24394899 -65109654 + AluSx SINE Alu 1 296 -16 1837 122 58 0 chr17 24395700 24395995 -65108558 - AluJb SINE Alu 0 312 1 400 208 50 10 chr17 24396066 24396167 -65108386 - MLT1C LTR MaLR -15 452 348 1916 169 21 12 chr17 24396326 24396663 -65107890 - MER7A DNA MER2_type -7 339 2 436 286 101 14 chr17 24397243 24397508 -65107045 - L1ME3 LINE L1 -267 5895 5592 1262 249 166 26 chr17 24397523 24398210 -65106343 - L1MC4 LINE L1 -2 8040 7258 309 109 0 0 chr17 24398238 24398284 -65106269 + (CATA)n Simple_repeat Simple_repeat 1 46 0 1902 165 32 0 chr17 24398291 24398606 -65105947 - MER2 DNA MER2_type -20 325 1 365 264 31 39 chr17 24398624 24398753 -65105800 - L1MB5 LINE L1 0 6174 6047 1199 225 31 17 chr17 24398757 24399050 -65105503 - L1MB5 LINE L1 -166 6008 5712 492 225 43 22 chr17 24399062 24399200 -65105353 - L1MC4 LINE L1 -800 7242 7102 1955 129 7 3 chr17 24400671 24400966 -65103587 - AluSx SINE Alu -16 296 1 1577 119 15 128 chr17 24401342 24401559 -65102994 - AluJo SINE Alu -1 301 134 1990 86 31 14 chr17 24401559 24401849 -65102704 + AluSc SINE Alu 1 295 -14 1577 119 15 128 chr17 24401849 24401968 -65102585 - AluJo SINE Alu -168 134 3 1564 168 39 11 chr17 24402040 24402325 -65102228 + AluJb SINE Alu 12 304 -8 1826 89 8 0 chr17 24402428 24402675 -65101878 - AluSx SINE Alu -63 249 1 3017 197 65 41 chr17 24402677 24403668 -65100885 - L1MB5 LINE L1 -35 6139 5115 1791 150 3 10 chr17 24403668 24403968 -65100585 - AluJb SINE Alu -14 298 1 3017 197 65 41 chr17 24403968 24404226 -65100327 - L1MB5 LINE L1 -1059 5115 4865 439 332 27 11 chr17 24404741 24404928 -65099625 - MIR SINE MIR -52 210 21 1845 136 31 3 chr17 24404986 24405280 -65099273 - AluJb SINE Alu -8 304 3 3033 129 19 25 chr17 24405306 24405819 -65098734 - L1PA13 LINE L1 -7 6156 5647 2381 71 0 0 chr17 24405839 24406133 -65098420 - AluY SINE Alu -15 296 3 189 0 0 0 chr17 24406250 24406271 -65098282 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1902 153 3 3 chr17 24406527 24406835 -65097718 - AluSx SINE Alu -4 308 1 273 57 0 0 chr17 24408372 24408407 -65096146 + (T)n Simple_repeat Simple_repeat 1 35 0 183 357 62 0 chr17 24409697 24409809 -65094744 - L2 LINE L2 -10 3262 3144 1597 157 68 0 chr17 24409936 24410217 -65094336 - AluJb SINE Alu -12 300 1 520 275 13 27 chr17 24411417 24411566 -65092987 + MER58B DNA MER1_type 195 341 0 1086 307 60 16 chr17 24411729 24412175 -65092378 - L1ME1 LINE L1 -6 6160 5695 518 259 130 0 chr17 24413628 24413790 -65090763 - MER5A DNA MER1_type -2 187 5 2244 60 4 0 chr17 24414553 24414858 -65089695 - AluY SINE Alu 0 306 1 842 149 0 8 chr17 24416375 24416509 -65088044 - FLAM_A SINE Alu 0 133 1 1820 126 65 0 chr17 24417970 24418248 -65086305 - AluSx SINE Alu -13 299 4 880 132 0 111 chr17 24418472 24418661 -65085892 - FRAM SINE Alu -15 161 1 2116 118 0 13 chr17 24418665 24418978 -65085575 - AluSx SINE Alu -3 309 1 2183 114 3 3 chr17 24419534 24419842 -65084711 - AluSp SINE Alu -5 308 1 551 268 95 0 chr17 24419853 24420021 -65084532 - L1MD1 LINE L1 0 6242 6059 1213 236 62 21 chr17 24420024 24420410 -65084143 - L1MD1 LINE L1 -232 6010 5609 464 226 97 77 chr17 24421129 24421284 -65083269 - MER58C DNA MER1_type 0 215 58 2272 88 0 0 chr17 24421848 24422143 -65082410 + AluSc SINE Alu 1 295 -14 765 243 205 35 chr17 24422467 24422871 -65081682 - MLT1D LTR MaLR -6 499 27 2140 117 7 0 chr17 24424719 24425026 -65079527 - AluSq SINE Alu -4 309 1 653 253 269 0 chr17 24427014 24427263 -65077290 - MER58B DNA MER1_type 0 341 26 1935 100 75 0 chr17 24427584 24427865 -65076688 - AluSq SINE Alu -11 302 1 431 349 33 19 chr17 24429769 24429981 -65074572 - ERVL LTR ERVL -810 4954 4740 562 331 87 13 chr17 24430052 24430584 -65073969 - ERVL LTR ERVL -1143 4621 3963 332 256 163 69 chr17 24434376 24434739 -65069814 + MLT1H LTR MaLR 115 511 -38 403 351 21 16 chr17 24435118 24435309 -65069244 + L1MC4a LINE L1 5697 5888 -1920 216 0 0 0 chr17 24435481 24435505 -65069048 + (A)n Simple_repeat Simple_repeat 1 24 0 269 319 0 0 chr17 24436346 24436415 -65068138 + (TG)n Simple_repeat Simple_repeat 1 69 0 183 347 106 33 chr17 24437629 24437903 -65066650 + L2 LINE L2 1991 2284 -1030 1135 252 93 32 chr17 24438018 24438458 -65066095 + MLT1C LTR MaLR 1 467 0 394 120 40 50 chr17 24439081 24439181 -65065372 + LTR52 LTR ERVL 201 299 -122 535 212 15 6 chr17 24439288 24439437 -65065116 - L1P LINE L1 -1561 4585 4432 261 228 76 43 chr17 24439458 24439550 -65065003 + LTR52 LTR ERVL 316 410 -11 193 219 0 47 chr17 24439625 24439689 -65064864 + L2 LINE L2 2917 2977 -295 2045 133 7 0 chr17 24439710 24440011 -65064542 - AluSq SINE Alu -10 303 1 196 329 0 13 chr17 24440104 24440180 -65064373 - MIR SINE MIR -73 135 61 274 320 56 25 chr17 24441067 24441204 -65063349 + MIR SINE MIR 21 159 -49 3688 110 25 8 chr17 24441415 24442006 -65062547 - L1PA16 LINE L1 -105 6061 5461 2154 103 7 3 chr17 24442105 24442407 -65062146 - AluSp SINE Alu -10 303 1 7163 62 7 27 chr17 24442422 24443715 -65060838 - SVA Other Other -683 1386 393 21 36 0 0 chr17 24443766 24443794 -65060759 + GC_rich Low_complexity Low_complexity 1 28 0 505 259 191 0 chr17 24443974 24444136 -65060417 + MIR SINE MIR 58 250 -12 2182 90 0 32 chr17 24444685 24444996 -65059557 - AluSp SINE Alu -12 301 1 422 219 26 44 chr17 24445149 24445263 -65059290 + MIR SINE MIR 12 123 -139 * 446 254 141 27 chr17 24445259 24445444 -65059109 - L2 LINE L2 -10 3303 3098 287 259 164 31 chr17 24445472 24445758 -65058795 + L1MC5 LINE L1 7603 7926 -35 538 286 103 5 chr17 24445784 24446008 -65058545 - L2 LINE L2 -188 3084 2839 259 223 223 0 chr17 24446361 24446464 -65058089 + MIR3 SINE MIR 15 140 -68 497 306 26 91 chr17 24446475 24446903 -65057650 + L2 LINE L2 2855 3254 -18 684 300 16 15 chr17 24446984 24447226 -65057327 - L1ME3 LINE L1 -8 6162 5927 323 262 99 21 chr17 24447227 24447368 -65057185 - L1ME3 LINE L1 -269 5893 5742 1513 187 55 3 chr17 24447464 24447753 -65056800 + AluJo SINE Alu 1 304 -8 1335 289 132 68 chr17 24447760 24448916 -65055637 + HAL1 LINE L1 3 1233 -1274 2043 91 3 11 chr17 24449016 24449303 -65055250 + AluSc SINE Alu 25 309 0 3475 200 56 21 chr17 24449310 24449368 -65055185 + L1MB4 LINE L1 5277 5332 -848 2086 95 0 3 chr17 24449368 24449681 -65054872 + AluY SINE Alu 1 312 0 3475 200 56 21 chr17 24449681 24450462 -65054091 + L1MB4 LINE L1 5332 6146 -34 396 333 75 11 chr17 24450905 24451091 -65053462 + MIR SINE MIR 47 244 -18 301 242 0 17 chr17 24451578 24451698 -65052855 + GA-rich Low_complexity Low_complexity 3 120 0 32 26 0 0 chr17 24452254 24452293 -65052260 + AT_rich Low_complexity Low_complexity 1 39 0 786 231 19 0 chr17 24452299 24452455 -65052098 - AluJo/FRAM SINE Alu -21 291 133 289 267 14 27 chr17 24652914 24653060 -64851493 + (TTATA)n Simple_repeat Simple_repeat 3 146 0 369 156 0 0 chr17 24653061 24653125 -64851428 - MLT2B2 LTR ERVL -451 64 1 1246 190 16 75 chr17 24654031 24654336 -64850217 - AluJo SINE Alu -15 297 11 2198 71 41 10 chr17 24654787 24655082 -64849471 - AluYa5 SINE Alu -7 304 1 2253 89 0 7 chr17 24656084 24656377 -64848176 - AluY SINE Alu -2 309 19 624 100 0 0 chr17 24657109 24657199 -64847354 + AluY SINE Alu 217 306 -5 4773 170 26 25 chr17 24657893 24659118 -64845435 - L1MA7 LINE L1 -5 6286 5058 234 299 23 11 chr17 24659139 24659226 -64845327 + MIR3 SINE MIR 113 200 -8 1695 167 27 17 chr17 24660414 24660713 -64843840 - AluJo SINE Alu -10 302 1 2137 126 3 0 chr17 24661381 24661675 -64842878 - AluSq SINE Alu -18 295 1 1757 175 13 10 chr17 24661821 24662124 -64842429 + AluJo SINE Alu 3 306 -6 219 182 23 0 chr17 24662139 24662183 -64842370 + A-rich Low_complexity Low_complexity 1 45 0 2287 100 3 0 chr17 24662304 24662603 -64841950 + AluSp SINE Alu 1 300 -13 25 0 0 0 chr17 24666186 24666211 -64838342 + AT_rich Low_complexity Low_complexity 1 25 0 722 274 167 35 chr17 24667100 24667677 -64836876 + L2 LINE L2 2592 3246 -67 2197 113 0 7 chr17 24668411 24668712 -64835841 + AluSx SINE Alu 1 299 -13 841 185 0 34 chr17 24668900 24669078 -64835475 - AluJo SINE Alu -19 293 122 257 154 0 46 chr17 24669556 24669621 -64834932 - L1MCa LINE L1 -4359 2067 2006 419 218 18 0 chr17 24669624 24669734 -64834819 + (CATATA)n Simple_repeat Simple_repeat 6 117 0 225 261 0 22 chr17 24669734 24669826 -64834727 - L1MC4 LINE L1 -1339 6703 6614 225 150 50 0 chr17 24669826 24669866 -64834687 + (CATA)n Simple_repeat Simple_repeat 4 45 0 331 161 0 0 chr17 24669866 24669922 -64834631 - L1MC4 LINE L1 -1339 6703 6648 2104 88 25 14 chr17 24669945 24670228 -64834325 - AluSg SINE Alu -24 286 1 1666 92 4 40 chr17 24670820 24671070 -64833483 - AluSx SINE Alu -8 304 64 2134 83 50 0 chr17 24671578 24671856 -64832697 + AluSc SINE Alu 1 292 -17 1314 189 102 22 chr17 24671886 24672161 -64832392 + AluJb SINE Alu 1 297 -15 1933 141 3 3 chr17 24672895 24673208 -64831345 + AluSg SINE Alu 3 315 0 880 169 97 147 chr17 24673693 24673888 -64830665 + L1MC5 LINE L1 6732 6935 -1026 1737 183 6 6 chr17 24673888 24674200 -64830353 + AluJb SINE Alu 1 312 0 880 169 97 147 chr17 24674200 24674488 -64830065 + L1MC5 LINE L1 6935 7191 -770 599 186 174 12 chr17 24674503 24674664 -64829889 - MER20 DNA MER1_type 0 219 33 778 192 179 19 chr17 24674681 24674713 -64829840 + L1MC5 LINE L1 7203 7229 -732 333 0 0 0 chr17 24674713 24674750 -64829803 + (CA)n Simple_repeat Simple_repeat 2 38 0 778 192 179 19 chr17 24674750 24675029 -64829524 + L1MC5 LINE L1 7229 7564 -397 207 0 0 0 chr17 24675058 24675081 -64829472 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1154 172 64 0 chr17 24675090 24675294 -64829259 + AluJb SINE Alu 92 308 -4 2809 141 11 27 chr17 24675590 24676065 -64828488 + MLT1C LTR MaLR 1 467 0 1956 150 6 13 chr17 24676272 24676586 -64827967 + AluJb SINE Alu 1 312 0 1302 169 0 5 chr17 24676678 24676879 -64827674 - AluJo SINE Alu -108 204 5 2305 115 0 0 chr17 24677336 24677641 -64826912 + AluSx SINE Alu 1 305 -7 2127 104 0 7 chr17 24677680 24677967 -64826586 + AluSx SINE Alu 21 305 -7 596 195 47 39 chr17 24678384 24678512 -64826041 - FLAM_A SINE Alu -4 129 1 220 356 114 41 chr17 24678528 24678694 -64825859 + MIR SINE MIR 8 180 -57 1911 156 0 7 chr17 24680573 24680874 -64823679 + AluJb SINE Alu 5 303 -9 2077 121 10 22 chr17 24681000 24681314 -64823239 - AluSx SINE Alu -2 310 1 2609 35 0 13 chr17 24683357 24683672 -64820881 + AluY SINE Alu 1 311 0 2674 160 45 37 chr17 24684088 24684352 -64820201 + L1MC4 LINE L1 6976 7236 -806 2235 117 0 0 chr17 24684352 24684660 -64819893 + AluSx SINE Alu 1 308 -4 2674 160 45 37 chr17 24684660 24685044 -64819509 + L1MC4 LINE L1 7236 7629 -413 487 153 0 259 chr17 24685050 24685139 -64819414 + L1MC4 LINE L1 7754 7864 -178 1847 90 131 4 chr17 24685139 24685407 -64819146 + AluSx SINE Alu 1 302 0 487 153 0 259 chr17 24685407 24685630 -64818923 + L1MC4 LINE L1 7864 7985 -57 1137 146 6 0 chr17 24685630 24685808 -64818745 - AluSg/x SINE Alu -12 298 120 2072 118 0 7 chr17 24685985 24686281 -64818272 + AluSq SINE Alu 5 298 -15 2237 114 0 3 chr17 24686405 24686704 -64817849 + AluSq SINE Alu 1 298 -15 184 216 118 0 chr17 24687606 24687657 -64816896 - L2 LINE L2 0 3313 3257 673 138 14 51 chr17 24687834 24687972 -64816581 + FLAM_C SINE Alu 1 133 0 311 281 160 31 chr17 24688468 24688756 -64815797 + L1MC4a LINE L1 5630 5954 -1854 308 64 106 0 chr17 24688756 24688850 -64815703 + (TA)n Simple_repeat Simple_repeat 2 105 0 237 277 54 77 chr17 24689029 24689200 -64815353 + L1MC4a LINE L1 6129 6303 -1505 2195 117 0 0 chr17 24689200 24689491 -64815062 - AluSg SINE Alu -18 292 2 237 277 54 77 chr17 24689491 24689738 -64814815 + L1MC4a LINE L1 6303 6537 -1271 2160 118 0 0 chr17 24689738 24690043 -64814510 + AluSg1 SINE Alu 1 305 -4 237 277 54 77 chr17 24690043 24690088 -64814465 + L1MC4a LINE L1 6537 6582 -1226 1251 153 5 10 chr17 24690088 24690291 -64814262 + AluSx SINE Alu 33 234 -78 596 140 10 0 chr17 24690293 24690393 -64814160 + AluJb SINE Alu 203 303 -9 2134 142 0 0 chr17 24690402 24690697 -64813856 + AluSg SINE Alu 1 295 -15 2354 96 0 3 chr17 24690715 24691017 -64813536 + AluSc SINE Alu 1 301 -8 354 242 126 26 chr17 24691031 24691221 -64813332 + L1MC4 LINE L1 7110 7318 -724 1851 140 46 0 chr17 24691224 24691509 -64813044 + AluSx SINE Alu 1 298 -14 226 256 26 0 chr17 24691513 24691591 -64812962 + L1MC4 LINE L1 7822 7901 -141 280 332 61 19 chr17 24691817 24692031 -64812522 - L2 LINE L2 -1228 2086 1864 1632 160 46 3 chr17 24692038 24692320 -64812233 + AluSx SINE Alu 1 294 -18 2320 95 0 0 chr17 24692324 24692619 -64811934 + AluY SINE Alu 3 297 -14 219 349 16 0 chr17 24692770 24692833 -64811720 + MIR SINE MIR 14 77 -185 210 275 122 76 chr17 24692836 24692967 -64811586 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 24693270 24693298 -64811255 + AT_rich Low_complexity Low_complexity 1 28 0 218 229 145 99 chr17 24694363 24694494 -64810059 - MIR SINE MIR -82 180 44 238 333 16 0 chr17 24694497 24694560 -64809993 - MIR SINE MIR -185 77 14 2050 111 0 81 chr17 24694714 24694906 -64809647 - AluSx SINE Alu -5 307 152 2403 68 3 3 chr17 24694906 24695217 -64809336 - AluY SINE Alu 0 311 1 2050 111 0 81 chr17 24695217 24695358 -64809195 - AluSx SINE Alu -160 152 1 1957 143 6 16 chr17 24695378 24695693 -64808860 - AluSx SINE Alu 0 312 1 2351 74 0 0 chr17 24695850 24696148 -64808405 + AluY SINE Alu 2 299 -12 595 273 47 20 chr17 24696968 24697265 -64807288 - L1M4 LINE L1 -1681 4465 4161 264 133 0 22 chr17 24697274 24697319 -64807234 - Alu SINE Alu -258 44 1 1684 149 30 30 chr17 24697533 24697828 -64806725 - AluJb SINE Alu -15 297 3 303 193 0 0 chr17 24697870 24697927 -64806626 - AluJ/FLAM SINE Alu -245 57 1 2584 169 17 117 chr17 24698242 24698838 -64805715 + LTR34 LTR ERV1 4 507 -192 2283 92 3 0 chr17 24698838 24699132 -64805421 - AluSp SINE Alu -18 295 1 2584 169 17 117 chr17 24699132 24699306 -64805247 + LTR34 LTR ERV1 507 697 -2 25 31 0 0 chr17 24699331 24699363 -64805190 + AT_rich Low_complexity Low_complexity 1 32 0 416 202 21 0 chr17 24699397 24699491 -64805062 + L1MC/D LINE L1 5166 5261 -885 633 224 19 9 chr17 24699544 24699758 -64804795 + L1MC/D LINE L1 5259 5474 -2311 1057 202 40 78 chr17 24699853 24700224 -64804329 - MSTD LTR MaLR -39 357 1 2304 108 0 0 chr17 24700373 24700669 -64803884 - AluSq SINE Alu -17 296 1 1210 171 0 14 chr17 24700695 24700907 -64803646 + AluJb SINE Alu 4 210 -102 3133 180 60 26 chr17 24700996 24701010 -64803543 - L1MB3 LINE L1 -2 6182 6170 1305 194 21 4 chr17 24701010 24701289 -64803264 - L1MB3 LINE L1 -5 6178 5895 2442 91 7 0 chr17 24701280 24701587 -64802966 - AluSx SINE Alu -3 309 1 3133 180 60 26 chr17 24701587 24702000 -64802553 - L1MB3 LINE L1 -312 5872 5443 1301 271 138 24 chr17 24702453 24702505 -64802048 - L1ME2 LINE L1 -12 6152 6107 1772 163 10 7 chr17 24702505 24702800 -64801753 - AluJo SINE Alu -16 296 1 1301 271 138 24 chr17 24702800 24703259 -64801294 - L1ME2 LINE L1 -57 6107 5561 1920 142 6 22 chr17 24703259 24703576 -64800977 - AluJb SINE Alu 0 312 1 1301 271 138 24 chr17 24703576 24703657 -64800896 - L1ME2 LINE L1 -603 5561 5491 328 210 74 0 chr17 24704441 24704522 -64800031 + MIR3 SINE MIR 68 154 -54 2678 46 0 0 chr17 24706278 24706583 -64797970 + AluY SINE Alu 1 305 -6 1771 164 7 32 chr17 24706649 24706959 -64797594 - AluJo SINE Alu -10 302 1 475 311 103 38 chr17 24707173 24707572 -64796981 + L1ME LINE L1 3782 4206 -1940 225 0 0 0 chr17 24708029 24708054 -64796499 + (CA)n Simple_repeat Simple_repeat 2 26 0 3939 227 162 70 chr17 24708134 24709105 -64795448 + HAL1 LINE L1 14 895 -1612 2382 103 42 3 chr17 24709105 24709465 -64795088 + L1MB2 LINE L1 5794 6167 -4 3939 227 162 70 chr17 24709465 24710334 -64794219 + HAL1 LINE L1 895 2088 -419 2223 111 10 0 chr17 24710334 24710632 -64793921 + AluSx SINE Alu 1 301 -11 3939 227 162 70 chr17 24710632 24710975 -64793578 + HAL1 LINE L1 2088 2398 -109 327 295 100 16 chr17 24711278 24711468 -64793085 + L1ME LINE L1 5487 5692 -429 1465 208 0 24 chr17 24711522 24711811 -64792742 - AluJo SINE Alu -30 282 1 3724 146 11 22 chr17 24711866 24712961 -64791592 - L1MA4A LINE L1 -284 6019 4970 4285 175 52 18 chr17 24712965 24713913 -64790640 + L1M4 LINE L1 3835 4814 -1332 1519 188 41 16 chr17 24713924 24714243 -64790310 - L1MB5 LINE L1 -38 6136 5810 2326 185 73 14 chr17 24714243 24714761 -64789792 - MER68 LTR ERV1 -13 549 1 1454 148 107 0 chr17 24715579 24715823 -64788730 - AluJb SINE Alu -42 270 1 375 62 250 0 chr17 24715884 24715948 -64788605 + MADE1 DNA Mariner 1 80 0 806 219 10 42 chr17 24715965 24716157 -64788396 - MER58A DNA MER1_type -9 215 30 2043 131 0 0 chr17 24716838 24717142 -64787411 - AluSx SINE Alu 0 304 1 25 95 0 0 chr17 24717145 24717219 -64787334 + AT_rich Low_complexity Low_complexity 1 74 0 26 0 0 0 chr17 24717290 24717316 -64787237 + AT_rich Low_complexity Low_complexity 1 26 0 2355 76 0 41 chr17 24717379 24717694 -64786859 - AluY SINE Alu -9 302 1 366 237 10 0 chr17 24717701 24717798 -64786755 + L1M4 LINE L1 5083 5180 -966 10071 22 3 205 chr17 24717803 24719491 -64785062 - SVA Other Other -5 1381 35 392 225 49 21 chr17 24719583 24719725 -64784828 + L1M4 LINE L1 5187 5332 -814 327 231 11 44 chr17 24719767 24719858 -64784695 + L1M LINE L1 5311 5398 -764 2346 96 0 3 chr17 24720017 24720318 -64784235 - AluSq SINE Alu -13 300 1 676 243 94 99 chr17 24720406 24720786 -64783767 - MLT1H1 LTR MaLR -211 379 1 1972 144 0 27 chr17 24720854 24720993 -64783560 + AluSx SINE Alu 2 143 -169 2352 92 0 0 chr17 24720993 24721285 -64783268 + AluSq SINE Alu 9 300 -13 1972 144 0 27 chr17 24721285 24721444 -64783109 + AluSx SINE Alu 143 292 -20 1665 158 6 80 chr17 24721494 24721830 -64782723 - AluJo SINE Alu -1 311 1 2205 114 0 7 chr17 24721859 24722167 -64782386 - AluSc SINE Alu -3 306 1 2325 104 0 0 chr17 24722737 24723044 -64781509 + AluSg SINE Alu 1 307 -3 660 254 208 4 chr17 24724391 24724631 -64779922 - MLT1J LTR MaLR -17 494 206 1997 151 3 3 chr17 24724640 24724938 -64779615 + AluSx SINE Alu 1 298 -14 940 169 0 24 chr17 24724938 24725104 -64779449 + AluJb SINE Alu 135 296 -16 791 176 102 53 chr17 24725115 24725302 -64779251 - MLT1J LTR MaLR -315 196 1 321 192 82 0 chr17 24725304 24725377 -64779176 + LTR67 LTR ERVL 479 557 0 935 160 11 39 chr17 24725462 24725643 -64778910 + FRAM SINE Alu 1 176 0 2370 86 3 3 chr17 24725710 24726012 -64778541 - AluSq SINE Alu -10 303 2 1424 173 107 7 chr17 24726198 24726470 -64778083 + AluJo SINE Alu 1 299 -13 1015 139 0 0 chr17 24726781 24726918 -64777635 + AluSq/x SINE Alu 1 137 -176 2129 126 3 0 chr17 24726918 24727212 -64777341 + AluSx SINE Alu 1 295 -17 825 146 0 0 chr17 24727391 24727514 -64777039 - AluSg/x SINE Alu -15 297 175 182 298 258 14 chr17 24727661 24727940 -64776613 - L2 LINE L2 -459 2855 2509 222 37 0 0 chr17 24728333 24728360 -64776193 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2167 115 0 0 chr17 24728363 24728642 -64775911 - AluSg SINE Alu -31 279 1 260 327 13 27 chr17 24728828 24728978 -64775575 - L2 LINE L2 -896 2418 2271 2912 229 109 49 chr17 24729052 24729287 -64775266 - L1M4 LINE L1 -1886 4260 4041 2164 104 0 10 chr17 24729287 24729595 -64774958 - AluSg SINE Alu -3 307 3 2237 111 3 0 chr17 24729599 24729896 -64774657 - AluSx SINE Alu -14 298 1 2912 229 109 49 chr17 24729896 24730067 -64774486 - L1M4 LINE L1 -2107 4039 3880 2361 96 3 3 chr17 24730067 24730370 -64774183 - AluSx SINE Alu -9 303 1 2912 229 109 49 chr17 24730370 24731006 -64773547 - L1M4 LINE L1 -2266 3880 3150 1671 199 0 7 chr17 24731012 24731304 -64773249 - AluJo SINE Alu -22 290 1 323 103 0 205 chr17 24731323 24731401 -64773152 - AluJ/FLAM SINE Alu -239 63 2 857 197 44 26 chr17 24731413 24731562 -64772991 - L1ME LINE L1 -4549 1531 1375 2079 113 31 7 chr17 24731562 24731853 -64772700 + AluSx SINE Alu 1 298 -14 857 197 44 26 chr17 24731853 24731931 -64772622 - L1ME LINE L1 -4705 1375 1300 2307 95 0 3 chr17 24731932 24732237 -64772316 - AluY SINE Alu -7 304 1 2239 125 0 6 chr17 24732239 24732551 -64772002 - AluSg SINE Alu 0 310 1 1659 209 148 14 chr17 24732589 24733034 -64771519 + MLT1D LTR MaLR 1 505 0 1158 237 49 84 chr17 24733034 24733168 -64771385 - L1ME LINE L1 -4981 1089 952 2269 94 34 0 chr17 24733168 24733466 -64771087 - AluSq SINE Alu -5 308 1 1158 237 49 84 chr17 24733466 24734022 -64770531 - L1ME LINE L1 -5118 952 424 292 272 116 34 chr17 24734068 24734215 -64770338 - L1ME LINE L1 -5611 459 301 355 298 143 37 chr17 24734323 24734425 -64770128 - L1ME LINE L1 -5768 302 212 369 0 0 0 chr17 24734425 24734466 -64770087 + (CA)n Simple_repeat Simple_repeat 1 41 0 355 298 143 37 chr17 24734466 24734635 -64769918 - L1ME LINE L1 -5858 212 2 1665 180 36 20 chr17 24734649 24734818 -64769735 - AluJo SINE Alu -2 310 132 2270 118 0 3 chr17 24734818 24735132 -64769421 - AluSq SINE Alu 0 313 1 1665 180 36 20 chr17 24735132 24735267 -64769286 - AluJo SINE Alu -180 132 1 2143 118 3 3 chr17 24735336 24735360 -64769193 - AluSx SINE Alu -7 305 282 189 0 0 0 chr17 24735360 24735381 -64769172 + (CATTG)n Simple_repeat Simple_repeat 3 23 0 2143 118 3 3 chr17 24735381 24735661 -64768892 - AluSx SINE Alu -29 283 1 215 103 51 0 chr17 24735661 24735700 -64768853 + T-rich Low_complexity Low_complexity 2 42 0 2190 112 3 3 chr17 24735708 24736012 -64768541 - AluSx SINE Alu -8 304 1 2081 141 3 0 chr17 24736016 24736315 -64768238 - AluSx SINE Alu -12 300 1 294 309 24 0 chr17 24736317 24736401 -64768152 + L2 LINE L2 3228 3313 0 251 303 20 0 chr17 24736402 24736501 -64768052 + L2 LINE L2 1923 2023 -1291 1768 156 42 36 chr17 24736692 24736960 -64767593 + MER2 DNA MER2_type 1 273 -72 1629 103 183 0 chr17 24736960 24737212 -64767341 - AluSx SINE Alu -14 298 1 1768 156 42 36 chr17 24737212 24737276 -64767277 + MER2 DNA MER2_type 273 335 -10 1911 163 0 0 chr17 24737302 24737597 -64766956 + AluJb SINE Alu 1 295 -17 1966 125 0 40 chr17 24737605 24737933 -64766620 + AluSx SINE Alu 1 316 0 2056 135 0 3 chr17 24738137 24738433 -64766120 + AluSx SINE Alu 1 295 -17 211 127 18 18 chr17 24738633 24738688 -64765865 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1997 126 3 3 chr17 24738690 24738975 -64765578 - AluJb SINE Alu -27 285 1 2385 94 0 0 chr17 24739241 24739549 -64765004 - AluSg SINE Alu -2 308 1 2095 124 0 7 chr17 24739720 24740018 -64764535 - AluSq SINE Alu -17 296 1 497 258 69 25 chr17 24740079 24740238 -64764315 - MER117 DNA MER1_type -13 184 19 1810 165 20 3 chr17 24740281 24740578 -64763975 + AluJb SINE Alu 4 305 -7 1374 197 16 45 chr17 24740755 24741065 -64763488 - AluJb SINE Alu -11 301 1 27 49 0 0 chr17 24741242 24741283 -64763270 + AT_rich Low_complexity Low_complexity 1 41 0 2162 115 3 0 chr17 24741292 24741587 -64762966 + AluSg SINE Alu 1 296 -14 2347 98 0 0 chr17 24742016 24742312 -64762241 - AluSx SINE Alu -16 296 1 206 262 318 0 chr17 24742568 24742675 -64761878 + MIR SINE MIR 5 145 -117 201 267 0 0 chr17 24742716 24742761 -64761792 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 289 169 203 0 chr17 24742762 24742821 -64761732 + LOR1b LTR ERV1 2 72 -389 287 122 0 20 chr17 24742823 24742872 -64761681 + U6 snRNA snRNA 1 48 -59 2063 184 5 54 chr17 24742872 24742915 -64761638 + LOR1b LTR ERV1 58 102 -359 2001 128 3 38 chr17 24742915 24743235 -64761318 - AluSx SINE Alu -3 309 1 2063 184 5 54 chr17 24743235 24743401 -64761152 + LOR1b LTR ERV1 102 275 -186 2265 111 13 19 chr17 24743401 24743716 -64760837 - AluSq SINE Alu 0 313 1 2063 184 5 54 chr17 24743716 24743930 -64760623 + LOR1b LTR ERV1 275 461 0 201 246 53 0 chr17 24743940 24743997 -64760556 + MIR SINE MIR 199 258 -4 1982 124 11 14 chr17 24744029 24744335 -64760218 + AluSx SINE Alu 3 307 0 21 71 0 0 chr17 24744407 24744449 -64760104 + AT_rich Low_complexity Low_complexity 1 42 0 2140 143 3 3 chr17 24744515 24744823 -64759730 + AluSx SINE Alu 1 308 -4 1472 147 41 69 chr17 24745545 24745865 -64758688 - L1MB7 LINE L1 0 6184 5874 511 125 0 0 chr17 24745879 24745959 -64758594 - FLAM_C SINE Alu 0 143 64 2064 87 30 0 chr17 24746684 24746950 -64757603 + AluSg SINE Alu 37 310 0 24 0 0 0 chr17 24746970 24746994 -64757559 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr17 24747480 24747503 -64757050 + (CAA)n Simple_repeat Simple_repeat 2 24 0 585 91 0 0 chr17 24747503 24747580 -64756973 - AluJ/FLAM SINE Alu -234 78 2 3084 167 59 46 chr17 24747582 24748390 -64756163 - L1MB7 LINE L1 -298 5886 5090 1413 196 39 29 chr17 24748390 24748671 -64755882 + AluJb SINE Alu 5 288 -24 21 0 0 0 chr17 24748674 24748695 -64755858 + AT_rich Low_complexity Low_complexity 1 21 0 3084 167 59 46 chr17 24748695 24748992 -64755561 - L1MB7 LINE L1 -1095 5089 4739 2174 113 40 35 chr17 24748992 24749365 -64755188 + THE1C LTR MaLR 1 375 0 3084 167 59 46 chr17 24749365 24749451 -64755102 - L1MB7 LINE L1 -1445 4739 4656 438 126 6 154 chr17 24749429 24749604 -64754949 - L1MCa LINE L1 -4066 2360 2212 * 1684 180 13 19 chr17 24749614 24749925 -64754628 - AluJb SINE Alu -3 309 1 365 210 12 0 chr17 24749930 24750011 -64754542 - L1MB7 LINE L1 -1482 4944 4863 2052 128 0 3 chr17 24750011 24750307 -64754246 + AluSx SINE Alu 1 295 -17 356 57 75 0 chr17 24750308 24750361 -64754192 + L1MA5 LINE L1 6244 6300 0 284 261 0 0 chr17 24750370 24750439 -64754114 + L1M4 LINE L1 4266 4334 -1812 1861 106 4 0 chr17 24750467 24750713 -64753840 + AluSg SINE Alu 62 308 -2 969 115 0 34 chr17 24750748 24750896 -64753657 + FLAM_C SINE Alu 1 143 0 914 197 22 48 chr17 24751197 24751425 -64753128 - AluJo SINE Alu -90 222 1 771 161 0 29 chr17 24751475 24751643 -64752910 - FLAM_C SINE Alu 0 133 1 774 229 7 0 chr17 24751672 24751825 -64752728 + AluJb SINE Alu 134 287 -25 233 220 0 0 chr17 24752050 24752109 -64752444 + T-rich Low_complexity Low_complexity 1 59 0 1766 162 20 7 chr17 24752226 24752523 -64752030 - AluJo SINE Alu -11 301 1 2026 135 3 0 chr17 24752570 24752899 -64751654 - AluSx SINE Alu 0 330 1 30 59 0 0 chr17 24753000 24753051 -64751502 + AT_rich Low_complexity Low_complexity 1 51 0 1888 144 0 34 chr17 24753151 24753443 -64751110 - AluSx SINE Alu -30 282 1 29 28 0 0 chr17 24753522 24753558 -64750995 + AT_rich Low_complexity Low_complexity 1 36 0 2469 89 0 3 chr17 24754041 24754354 -64750199 + AluSx SINE Alu 1 312 0 293 216 0 0 chr17 24754429 24754480 -64750073 + MER33 DNA MER1_type 3 53 -271 1693 197 3 0 chr17 24754480 24754775 -64749778 + AluJo SINE Alu 1 296 -16 538 238 78 68 chr17 24757077 24757283 -64747270 - MLT1L LTR MaLR -55 560 353 24 0 0 0 chr17 24759427 24759451 -64745102 + AT_rich Low_complexity Low_complexity 1 24 0 515 181 16 19 chr17 24759585 24759735 -64744818 + MIR SINE MIR 33 182 -62 982 167 5 10 chr17 24760174 24760366 -64744187 + MER33 DNA MER1_type 49 239 -85 335 179 0 0 chr17 24760359 24760415 -64744138 + AluSp SINE Alu 134 189 -114 * 686 125 0 0 chr17 24760434 24760530 -64744023 + AluS SINE Alu 2 97 -216 558 67 0 0 chr17 24762970 24763045 -64741508 + (TG)n Simple_repeat Simple_repeat 2 76 0 2068 129 19 13 chr17 24763114 24763424 -64741129 + AluSx SINE Alu 1 312 0 395 105 0 7 chr17 24763432 24763493 -64741060 + Alu SINE Alu 3 55 -248 1441 201 0 19 chr17 24763494 24763762 -64740791 - AluJb SINE Alu -49 263 1 2129 135 78 66 chr17 24763910 24764242 -64740311 + MSTA LTR MaLR 1 328 -100 2348 93 0 7 chr17 24764242 24764543 -64740010 - AluY SINE Alu -11 300 2 2129 135 78 66 chr17 24764543 24764590 -64739963 + MSTA LTR MaLR 328 373 -55 2170 137 0 0 chr17 24764590 24764890 -64739663 - AluSx SINE Alu -12 300 1 2129 135 78 66 chr17 24764890 24764932 -64739621 + MSTA LTR MaLR 373 428 0 183 281 288 13 chr17 24764946 24765099 -64739454 - MIR SINE MIR -30 232 38 21 0 0 0 chr17 24765185 24765206 -64739347 + AT_rich Low_complexity Low_complexity 1 21 0 885 165 0 0 chr17 24765645 24765778 -64738775 - AluSq/x SINE Alu -179 133 1 26 30 0 0 chr17 24767003 24767036 -64737517 + AT_rich Low_complexity Low_complexity 1 33 0 2090 108 10 10 chr17 24767036 24767324 -64737229 - AluSx SINE Alu -24 288 1 306 87 0 0 chr17 24767744 24767790 -64736763 + (TG)n Simple_repeat Simple_repeat 1 46 0 1536 211 13 0 chr17 24767987 24768285 -64736268 + AluJb SINE Alu 1 302 -10 385 310 104 39 chr17 24768322 24768586 -64735967 + L1ME4a LINE L1 5257 5502 -619 2592 52 0 3 chr17 24768586 24768892 -64735661 + AluY SINE Alu 1 305 -6 385 310 104 39 chr17 24768892 24769339 -64735214 + L1ME4a LINE L1 5502 6024 -97 2388 81 7 0 chr17 24769777 24770072 -64734481 + AluY SINE Alu 1 297 -14 3535 83 26 14 chr17 24770828 24771333 -64733220 - MER9 LTR ERVK 0 511 1 184 316 13 13 chr17 24773276 24773355 -64731198 - MIR3 SINE MIR -12 196 118 204 40 0 0 chr17 24775399 24775424 -64729129 + (TCC)n Simple_repeat Simple_repeat 1 25 0 272 342 0 40 chr17 24776441 24776590 -64727963 + MER5B DNA MER1_type 3 145 -33 215 307 10 30 chr17 24776762 24776863 -64727690 - MER5B DNA MER1_type -17 161 63 1452 254 59 61 chr17 24777935 24778324 -64726229 + MER82 DNA MER2_type 199 588 -65 1982 95 84 4 chr17 24778324 24778597 -64725956 + AluSp SINE Alu 1 295 -18 1452 254 59 61 chr17 24778597 24778663 -64725890 + MER82 DNA MER2_type 588 653 0 1998 122 4 0 chr17 24778866 24779129 -64725424 - AluSq SINE Alu -49 264 1 753 233 12 6 chr17 24779669 24779832 -64724721 + FRAM SINE Alu 1 164 -2 307 143 0 14 chr17 24780374 24780444 -64724109 + L1PA16 LINE L1 6080 6148 -18 363 145 12 48 chr17 24781439 24781522 -64723031 + L1 LINE L1 5174 5253 -893 * 2860 241 52 26 chr17 24781505 24781523 -64723030 + L1M4 LINE L1 2398 2414 -3732 2027 119 3 19 chr17 24781523 24781660 -64722893 + AluSq SINE Alu 1 139 -174 2206 124 0 0 chr17 24781660 24781959 -64722594 + AluSc SINE Alu 1 299 -10 2027 119 3 19 chr17 24781959 24782132 -64722421 + AluSq SINE Alu 139 306 -7 2860 241 52 26 chr17 24782132 24783282 -64721271 + L1M4 LINE L1 2414 3503 -2643 2402 98 7 0 chr17 24783285 24783590 -64720963 + AluSp SINE Alu 1 307 -6 446 36 0 0 chr17 24783703 24783759 -64720794 + AluY SINE Alu 244 299 -12 332 136 0 15 chr17 24783759 24783825 -64720728 + (TA)n Simple_repeat Simple_repeat 1 65 0 2083 103 0 39 chr17 24783902 24784214 -64720339 - AluSx SINE Alu -12 300 1 206 254 109 0 chr17 24784214 24784269 -64720284 - MIR3 SINE MIR -28 180 120 24 0 0 0 chr17 24784765 24784789 -64719764 + AT_rich Low_complexity Low_complexity 1 24 0 233 286 40 91 chr17 24785268 24785467 -64719086 + MER5A DNA MER1_type 1 189 0 26 0 0 0 chr17 24786467 24786493 -64718060 + AT_rich Low_complexity Low_complexity 1 26 0 2328 85 41 0 chr17 24788342 24788637 -64715916 + AluSx SINE Alu 1 307 -5 618 262 285 38 chr17 24789504 24789809 -64714744 + L2 LINE L2 1820 2048 -1266 2488 73 0 3 chr17 24789809 24790111 -64714442 - AluY SINE Alu -10 301 1 618 262 285 38 chr17 24790111 24790408 -64714145 + L2 LINE L2 2048 2571 -743 307 265 88 53 chr17 24790593 24790675 -64713878 - L2 LINE L2 -15 3298 3220 2050 126 27 0 chr17 24790675 24790968 -64713585 + AluSg SINE Alu 1 301 -9 307 265 88 53 chr17 24790968 24791055 -64713498 - L2 LINE L2 -93 3220 3123 237 128 0 0 chr17 24791474 24791521 -64713032 + (A)n Simple_repeat Simple_repeat 1 47 0 1349 130 5 19 chr17 24791559 24791767 -64712786 + AluSx SINE Alu 1 205 -107 318 226 131 0 chr17 24791929 24792013 -64712540 - FLAM_A SINE Alu -8 125 31 1849 178 7 0 chr17 24792020 24792323 -64712230 - AluJb SINE Alu -7 305 1 2276 114 3 0 chr17 24792561 24792860 -64711693 - AluSx SINE Alu -11 301 2 2420 97 0 0 chr17 24792880 24793191 -64711362 - AluY SINE Alu 0 311 1 1667 81 0 43 chr17 24794503 24794737 -64709816 + AluSg/x SINE Alu 69 292 -20 2272 108 7 0 chr17 24794945 24795251 -64709302 - AluSq SINE Alu -5 308 1 2181 89 0 22 chr17 24795756 24796071 -64708482 + AluY SINE Alu 1 308 -3 2419 81 0 3 chr17 24796415 24796713 -64707840 - AluSx SINE Alu -15 297 1 2566 61 0 3 chr17 24796942 24797254 -64707299 + AluY SINE Alu 1 311 0 2281 57 0 75 chr17 24797264 24797595 -64706958 + AluY SINE Alu 1 306 -5 786 181 0 8 chr17 24797607 24797740 -64706813 + FLAM_A SINE Alu 1 132 -1 2297 107 0 0 chr17 24797859 24798158 -64706395 - AluSq SINE Alu -14 299 1 1636 164 26 51 chr17 24798215 24798483 -64706070 + AluSx SINE Alu 8 268 -44 243 0 0 0 chr17 24798483 24798510 -64706043 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1636 164 26 51 chr17 24798510 24798553 -64706000 + AluSx SINE Alu 268 311 -1 2091 149 3 0 chr17 24798814 24799122 -64705431 + AluJb SINE Alu 1 309 -3 204 269 161 47 chr17 24799240 24799389 -64705164 + L2 LINE L2 2801 2966 -348 2420 95 0 0 chr17 24799390 24799694 -64704859 - AluSc SINE Alu -5 304 1 833 130 0 36 chr17 24799809 24799947 -64704606 - L1MB8 LINE L1 -241 5937 5805 856 264 125 19 chr17 24799979 24800354 -64704199 - LTR33 LTR ERVL -62 459 45 1055 104 0 0 chr17 24800456 24800591 -64703962 - AluSq/x SINE Alu -176 137 3 1876 123 65 4 chr17 24801294 24801571 -64702982 + AluSx SINE Alu 1 294 -18 1079 136 25 0 chr17 24801572 24801734 -64702819 + AluSg/x SINE Alu 134 299 -13 209 125 0 25 chr17 24801812 24801832 -64702721 + (TAA)n Simple_repeat Simple_repeat 2 21 -19 1923 142 0 10 chr17 24801832 24802121 -64702432 + AluSx SINE Alu 1 286 -26 209 125 0 25 chr17 24802121 24802140 -64702413 + (TAA)n Simple_repeat Simple_repeat 21 40 0 985 283 80 9 chr17 24802173 24802739 -64701814 + L1ME3A LINE L1 1025 1630 -4766 2355 109 0 0 chr17 24803519 24803830 -64700723 - AluSx SINE Alu -1 311 1 266 333 58 26 chr17 24803965 24804343 -64700210 + L1ME3A LINE L1 4861 5250 -965 268 299 49 73 chr17 24804359 24804687 -64699866 + L1ME LINE L1 4496 4815 -1331 658 146 0 108 chr17 24804687 24804757 -64699796 + AluJo/FLAM SINE Alu 7 60 -252 1733 134 45 0 chr17 24804757 24805054 -64699499 - AluSg SINE Alu 0 309 1 658 146 0 108 chr17 24805054 24805111 -64699442 + AluJo/FLAM SINE Alu 60 122 -190 1632 159 7 54 chr17 24805125 24805421 -64699132 + AluJo SINE Alu 1 282 -30 484 262 52 71 chr17 24805696 24805925 -64698628 + L1ME LINE L1 5265 5487 -675 1781 144 13 23 chr17 24805925 24806224 -64698329 + AluJb SINE Alu 4 299 -13 484 262 52 71 chr17 24806224 24806314 -64698239 + L1ME LINE L1 5487 5577 -585 1346 187 106 45 chr17 24806372 24806462 -64698091 + LTR38B LTR ERV1 1 84 -526 2156 127 0 0 chr17 24806462 24806753 -64697800 + AluSx SINE Alu 1 291 -21 1346 187 106 45 chr17 24806753 24807041 -64697512 + LTR38B LTR ERV1 84 402 -208 381 43 0 0 chr17 24807068 24807115 -64697438 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2107 110 0 27 chr17 24807115 24807410 -64697143 - AluSx SINE Alu -25 287 1 2165 85 4 4 chr17 24807470 24807793 -64696760 - AluY SINE Alu 0 323 1 1347 294 42 7 chr17 24808015 24808471 -64696082 + L1ME3A LINE L1 5482 5953 -286 567 129 0 0 chr17 24808471 24808564 -64695989 + LTR9B LTR ERV1 468 560 -84 2169 114 0 7 chr17 24808844 24809150 -64695403 + AluSx SINE Alu 1 304 -8 3343 128 31 26 chr17 24809435 24810013 -64694540 + LTR35 LTR ERV1 38 618 0 291 353 60 9 chr17 24810013 24810129 -64694424 - MER91A DNA MER1_type -27 169 48 1614 164 73 4 chr17 24810764 24810876 -64693677 + AluJo SINE Alu 7 110 -202 306 0 0 0 chr17 24810876 24810910 -64693643 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1614 164 73 4 chr17 24810910 24811071 -64693482 + AluJo SINE Alu 110 299 -13 481 81 32 0 chr17 24811520 24811582 -64692971 + AluSp/q SINE Alu 166 229 -84 180 0 0 0 chr17 24811594 24811614 -64692939 + (A)n Simple_repeat Simple_repeat 1 20 0 1912 147 26 16 chr17 24811910 24812217 -64692336 + AluSg SINE Alu 1 310 0 452 200 67 0 chr17 24813784 24813874 -64690679 - MER45A DNA AcHobo -52 126 31 1705 185 119 29 chr17 24814087 24814508 -64690045 - LTR2B LTR ERV1 0 490 32 767 197 0 44 chr17 24814607 24814744 -64689809 - FLAM_A SINE Alu -1 132 2 214 358 108 8 chr17 24814762 24814882 -64689671 - MIR3 SINE MIR -7 201 70 703 176 59 17 chr17 24815293 24815412 -64689141 + FLAM_C SINE Alu 1 124 -9 3311 140 14 31 chr17 24816018 24816591 -64687962 + L1MB1 LINE L1 5367 5929 -239 8836 126 50 8 chr17 24816617 24817970 -64686583 - THE1C-int LTR MaLR -170 1410 1 1704 117 53 148 chr17 24817972 24818384 -64686169 - THE1C LTR MaLR -2 373 1 1107 109 81 101 chr17 24818385 24818517 -64686036 + L1MB1 LINE L1 5926 6052 -116 1365 98 57 0 chr17 24818517 24818710 -64685843 + L1PA16 LINE L1 5953 6157 -9 1107 109 81 101 chr17 24818710 24818825 -64685728 + L1MB1 LINE L1 6052 6168 0 699 222 28 77 chr17 24819025 24819174 -64685379 + MIR SINE MIR 51 186 -76 2280 108 3 3 chr17 24819174 24819481 -64685072 + AluSx SINE Alu 1 307 -5 699 222 28 77 chr17 24819481 24819552 -64685001 + MIR SINE MIR 186 259 -3 1924 246 68 56 chr17 24819810 24820151 -64684402 - L1M4 LINE L1 -2030 4116 3781 2237 78 7 0 chr17 24820151 24820462 -64684091 + AluSp SINE Alu 1 313 0 1924 246 68 56 chr17 24820462 24821027 -64683526 - L1M4 LINE L1 -2365 3781 3198 749 292 97 58 chr17 24821029 24822063 -64682490 - L1ME LINE L1 -4669 1938 829 280 253 71 29 chr17 24822286 24822444 -64682109 + L1M LINE L1 5262 5399 -747 242 267 136 45 chr17 24823061 24823237 -64681316 + LTR67 LTR ERVL 358 549 -8 376 254 15 90 chr17 24823432 24823566 -64680987 - L2 LINE L2 -1 3312 3189 195 69 0 0 chr17 24823638 24823667 -64680886 + (CA)n Simple_repeat Simple_repeat 2 30 0 2497 69 3 0 chr17 24824281 24824584 -64679969 - AluY SINE Alu -7 304 1 1218 104 115 0 chr17 24825278 24825460 -64679093 - AluSp SINE Alu -110 203 1 4295 149 22 40 chr17 24825460 24825783 -64678770 - L1MB8 LINE L1 -106 6072 5745 1805 148 46 0 chr17 24825783 24826066 -64678487 - AluSx SINE Alu -16 296 1 4295 149 22 40 chr17 24826066 24826419 -64678134 - L1MB8 LINE L1 -433 5745 5387 1638 197 41 49 chr17 24826419 24826785 -64677768 + MLT1A1 LTR MaLR 3 365 0 4295 149 22 40 chr17 24826785 24826819 -64677734 - L1MB8 LINE L1 -791 5387 5354 1933 162 3 0 chr17 24826819 24827148 -64677405 - AluSx SINE Alu 0 312 1 4295 149 22 40 chr17 24827148 24827287 -64677266 - L1MB8 LINE L1 -824 5354 5240 1520 116 93 53 chr17 24827287 24827408 -64677145 + MER44D DNA MER2_type 1 116 -2375 2198 101 0 0 chr17 24827408 24827695 -64676858 + AluSg SINE Alu 1 287 -23 1520 116 93 53 chr17 24827695 24827874 -64676679 + MER44D DNA MER2_type 116 583 -26 396 178 0 0 chr17 24827879 24827986 -64676567 + (TA)n Simple_repeat Simple_repeat 1 107 0 314 296 23 0 chr17 24827986 24828074 -64676479 - L1MC4 LINE L1 -1337 6705 6616 480 188 0 0 chr17 24828075 24828233 -64676320 + (TA)n Simple_repeat Simple_repeat 1 161 -4 1683 197 0 3 chr17 24828233 24828522 -64676031 - AluJo SINE Alu -24 288 1 480 188 0 0 chr17 24828522 24828528 -64676025 + (TA)n Simple_repeat Simple_repeat 160 165 0 282 127 0 18 chr17 24828556 24828611 -64675942 - L1M4 LINE L1 -905 5241 5188 662 204 28 7 chr17 24828614 24828756 -64675797 + MLT1A1 LTR MaLR 18 162 -203 1410 129 0 0 chr17 24828766 24828960 -64675593 - AluSx SINE Alu -117 195 2 1733 172 17 0 chr17 24829069 24829365 -64675188 - AluJb SINE Alu -10 302 2 279 163 0 0 chr17 24829368 24829417 -64675136 - L1M4 LINE L1 -860 5286 5238 25 51 0 0 chr17 24829427 24829466 -64675087 + AT_rich Low_complexity Low_complexity 1 39 0 504 273 88 36 chr17 24829467 24829717 -64674836 + L1MC4a LINE L1 5701 5965 -197 336 158 14 4 chr17 24829721 24829949 -64674604 + AluJo SINE Alu 1 313 0 1978 136 0 34 chr17 24829950 24830280 -64674273 + AluSx SINE Alu 2 321 0 572 218 83 107 chr17 24831464 24831609 -64672944 + MIR SINE MIR 5 143 -119 1685 138 8 4 chr17 24831609 24831863 -64672690 + AluSx SINE Alu 53 307 -5 572 218 83 107 chr17 24831863 24831969 -64672584 + MIR SINE MIR 143 250 -12 1842 169 3 0 chr17 24832168 24832463 -64672090 + AluJb SINE Alu 1 296 -16 2058 119 3 13 chr17 24832511 24832821 -64671732 + AluSx SINE Alu 1 307 -5 1836 192 70 36 chr17 24833701 24833773 -64670780 + L1ME3A LINE L1 5641 5709 -461 2215 130 0 0 chr17 24833773 24834080 -64670473 - AluSx SINE Alu -5 307 1 1836 192 70 36 chr17 24834080 24834475 -64670078 + L1ME3A LINE L1 5709 6124 -46 256 379 8 38 chr17 24835118 24835250 -64669303 - L3 LINE CR1 -47 1530 1403 2364 126 59 6 chr17 24835486 24835842 -64668711 + THE1C LTR MaLR 1 375 0 573 231 43 0 chr17 24836137 24836254 -64668299 - MER91C DNA MER1_type -17 123 2 2026 133 3 0 chr17 24836561 24837027 -64667526 + AluSx SINE Alu 1 467 0 824 171 34 0 chr17 24837032 24837178 -64667375 + AluJb SINE Alu 137 287 -25 2053 86 7 17 chr17 24837192 24837484 -64667069 + L1PA13 LINE L1 5541 5829 -334 2226 120 0 0 chr17 24837484 24837784 -64666769 + AluSq SINE Alu 1 300 -13 3141 62 12 209 chr17 24838376 24838508 -64666045 + L1PA16 LINE L1 5353 5509 -657 1816 136 14 18 chr17 24838508 24838794 -64665759 - AluJo SINE Alu -21 291 7 3141 62 12 209 chr17 24838794 24838845 -64665708 + L1PA16 LINE L1 5509 5568 -598 2138 112 3 3 chr17 24838845 24839140 -64665413 + AluSx SINE Alu 1 295 -17 3141 62 12 209 chr17 24839140 24839153 -64665400 + L1PA16 LINE L1 5568 5582 -584 3141 125 17 25 chr17 24839153 24839433 -64665120 + L1PA16 LINE L1 5690 5967 -199 1981 109 25 0 chr17 24839433 24839741 -64664812 + AluSx SINE Alu 1 315 0 3141 125 17 25 chr17 24839741 24839939 -64664614 + L1PA16 LINE L1 5967 6165 -1 2138 109 11 0 chr17 24840130 24840414 -64664139 + AluSq SINE Alu 1 287 -26 28 0 0 0 chr17 24840421 24840449 -64664104 + AT_rich Low_complexity Low_complexity 1 28 0 235 114 0 0 chr17 24840922 24840957 -64663596 + Alu SINE Alu 29 63 -237 2829 209 58 6 chr17 24841059 24841392 -64663161 + L1MB7 LINE L1 3543 3857 -2289 2348 103 0 6 chr17 24841392 24841703 -64662850 + AluY SINE Alu 1 309 -2 2829 209 58 6 chr17 24841703 24842045 -64662508 + L1MB7 LINE L1 3857 4253 -1893 1641 215 36 34 chr17 24842043 24842461 -64662092 + L1MB7 LINE L1 4879 5297 -849 * 4028 180 65 40 chr17 24842753 24843670 -64660883 + L1MB7 LINE L1 5256 6177 -7 227 306 56 28 chr17 24843681 24843825 -64660728 + L1MC4a LINE L1 6058 6205 -1603 342 273 30 30 chr17 27845155 27845287 -61659266 + L1MEc LINE L1 153 284 -6112 422 294 18 54 chr17 27845290 27845511 -61659042 + L1M4 LINE L1 4880 5092 -1054 342 337 156 25 chr17 27845639 27845838 -61658715 + L1MEc LINE L1 1046 1270 -4935 663 171 36 0 chr17 27846480 27846591 -61657962 - AluJb SINE Alu -195 117 3 25 51 0 0 chr17 27847590 27847629 -61656924 + AT_rich Low_complexity Low_complexity 1 39 0 2314 100 3 0 chr17 27847900 27848210 -61656343 - AluY SINE Alu 0 311 1 405 243 0 78 chr17 27848423 27848526 -61656027 + MER21B LTR ERV1 1 95 -768 474 252 19 19 chr17 27848530 27848637 -61655916 + MER21B LTR ERV1 18 124 -739 864 153 0 0 chr17 27848758 27848928 -61655625 + (GAATG)n Satellite Satellite 5 174 0 821 150 0 6 chr17 27848998 27849165 -61655388 + (GAATG)n Satellite Satellite 5 170 0 382 127 32 0 chr17 27849176 27849239 -61655314 + AluJ/FRAM SINE Alu 225 289 -13 1035 139 0 0 chr17 27849239 27849302 -61655251 + (GAGTG)n Simple_repeat Simple_repeat 1 243 0 1035 139 0 0 chr17 27849302 27849482 -61655071 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 1032 133 0 0 chr17 27849492 27849672 -61654881 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 323 191 16 0 chr17 27849709 27849772 -61654781 + AluJ/FRAM SINE Alu 225 288 -14 1239 89 0 0 chr17 27849794 27849973 -61654580 + (GAATG)n Satellite Satellite 2 180 0 476 107 71 0 chr17 27849976 27850088 -61654465 - HSATII Satellite Satellite -4 166 47 1053 113 0 0 chr17 27850097 27850274 -61654279 + (GAATG)n Satellite Satellite 1 177 0 245 222 32 0 chr17 27850286 27850349 -61654204 + AluJ/FRAM SINE Alu 225 289 -13 419 179 0 8 chr17 27850349 27850466 -61654087 + (GAATG)n Simple_repeat Simple_repeat 1 116 0 891 161 0 0 chr17 27850471 27850651 -61653902 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 201 147 0 0 chr17 27850768 27850802 -61653751 + (GAGTG)n Simple_repeat Simple_repeat 1 34 0 1041 128 0 0 chr17 27850802 27850922 -61653631 + (GAGTG)n Simple_repeat Simple_repeat 1 300 0 1041 128 0 0 chr17 27850922 27851102 -61653451 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 358 162 44 0 chr17 27851174 27851242 -61653311 + AluJ/FRAM SINE Alu 225 295 -7 1197 123 4 7 chr17 27851242 27851690 -61652863 + (GAATG)n Satellite Satellite 1 447 0 244 222 48 0 chr17 27851702 27851765 -61652788 + AluJ/FRAM SINE Alu 225 290 -12 650 171 14 0 chr17 27851788 27851934 -61652619 + (GAATG)n Simple_repeat Simple_repeat 2 149 0 377 159 16 0 chr17 27851934 27851997 -61652556 + AluJ/FRAM SINE Alu 225 288 -14 927 161 0 0 chr17 27852045 27852225 -61652328 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 1032 149 0 0 chr17 27852213 27852494 -61652059 + (GAATG)n Satellite Satellite 1 281 0 810 180 0 0 chr17 27852506 27852684 -61651869 + (GAATG)n Satellite Satellite 2 179 0 369 230 21 4 chr17 27852684 27852784 -61651769 + AluSc SINE Alu 223 285 -14 245 95 0 24 chr17 27852784 27852826 -61651727 + (GAATG)n Simple_repeat Simple_repeat 1 41 0 1041 145 0 0 chr17 27852827 27853196 -61651357 + (GAGTG)n Simple_repeat Simple_repeat 1 369 0 233 69 0 0 chr17 27853197 27853226 -61651327 + (GAATG)n Simple_repeat Simple_repeat 1 29 0 309 238 32 0 chr17 27853226 27853316 -61651237 + AluJ/FRAM SINE Alu 226 288 -14 888 150 6 0 chr17 27853338 27853661 -61650892 + (GAATG)n Satellite Satellite 1 325 0 226 264 44 0 chr17 27855114 27855205 -61649348 - LTR48 LTR ERV1 -48 739 645 214 136 17 17 chr17 27855205 27855264 -61649289 + (TA)n Simple_repeat Simple_repeat 1 59 0 1447 183 89 57 chr17 27855298 27855680 -61648873 - LTR49 LTR ERV1 -168 427 30 1934 137 7 0 chr17 27855680 27855958 -61648595 + AluSq SINE Alu 14 293 -20 1447 183 89 57 chr17 27855958 27855979 -61648574 - LTR49 LTR ERV1 -565 30 11 225 0 0 0 chr17 27856105 27856130 -61648423 + (TG)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr17 27856687 27856719 -61647834 + AT_rich Low_complexity Low_complexity 1 32 0 462 245 144 11 chr17 27856969 27857157 -61647396 + MER20 DNA MER1_type 4 216 -3 1753 185 66 12 chr17 27857275 27857717 -61646836 - LTR56 LTR ERV1 0 437 1 2256 178 105 13 chr17 27857902 27858446 -61646107 - LTR49 LTR ERV1 -1 594 1 25 51 0 0 chr17 27858991 27859030 -61645523 + AT_rich Low_complexity Low_complexity 1 39 0 187 152 43 0 chr17 27859221 27859267 -61645286 + (TA)n Simple_repeat Simple_repeat 2 49 0 26 0 0 0 chr17 27859486 27859512 -61645041 + AT_rich Low_complexity Low_complexity 1 26 0 1445 240 46 10 chr17 27860316 27860732 -61643821 - MER54A LTR ERVL 0 901 471 2201 112 74 15 chr17 27860769 27861107 -61643446 - THE1B LTR MaLR 0 364 7 1625 211 51 2 chr17 27861116 27861509 -61643044 - MER54A LTR ERVL -489 412 1 22 0 0 0 chr17 27862679 27862701 -61641852 + AT_rich Low_complexity Low_complexity 1 22 0 1409 208 0 35 chr17 27862701 27862989 -61641564 - AluJb SINE Alu -24 288 11 1306 251 49 59 chr17 27863977 27864209 -61640344 - MLT1D LTR MaLR 0 505 272 2102 121 7 7 chr17 27864209 27864515 -61640038 - AluSc SINE Alu -1 308 3 1306 251 49 59 chr17 27864515 27864788 -61639765 - MLT1D LTR MaLR -233 272 5 21 0 0 0 chr17 27864848 27864869 -61639684 + AT_rich Low_complexity Low_complexity 1 21 0 819 196 17 13 chr17 27864914 27865482 -61639071 + GA-rich Low_complexity Low_complexity 1 570 0 459 249 18 6 chr17 27865655 27865824 -61638729 + GA-rich Low_complexity Low_complexity 3 173 0 805 263 46 19 chr17 27865926 27866295 -61638258 - L1MCa LINE L1 -3518 2908 2530 423 287 86 29 chr17 27866335 27866509 -61638044 - L1MCa LINE L1 -4990 1436 1253 1396 238 3 7 chr17 27866744 27867038 -61637515 - MLT1A1 LTR MaLR 0 365 73 316 331 68 0 chr17 27867447 27867595 -61636958 - L1MC/D LINE L1 -768 5474 5317 242 194 42 28 chr17 27867777 27867849 -61636704 - L1MC/D LINE L1 -1109 5037 4965 1185 235 165 34 chr17 27867870 27868313 -61636240 - L1MB5 LINE L1 -9 6165 5665 478 279 34 39 chr17 27868319 27868655 -61635898 + L1M4c LINE L1 1518 1864 -4535 2087 113 3 0 chr17 27868701 27868983 -61635570 + AluY SINE Alu 1 283 -28 606 289 95 10 chr17 27869416 27869790 -61634763 + L1M4c LINE L1 2336 2694 -3688 1968 196 106 12 chr17 27869793 27870217 -61634336 + MLT1C LTR MaLR 4 467 0 358 291 97 20 chr17 27870271 27870467 -61634086 + L1M4 LINE L1 8 218 -6324 297 287 17 20 chr17 27870791 27870918 -61633635 + L1M4 LINE L1 610 929 -5717 1442 229 90 24 chr17 27871096 27871783 -61632770 + L1M4 LINE L1 820 1529 -5022 261 250 8 15 chr17 27871813 27871945 -61632608 + CT-rich Low_complexity Low_complexity 1 131 0 22 35 0 0 chr17 27872235 27872264 -61632289 + AT_rich Low_complexity Low_complexity 1 29 0 546 306 123 35 chr17 27872701 27873074 -61631479 - L2 LINE L2 -499 2815 2410 551 283 58 26 chr17 27874354 27874545 -61630008 + HERVL LTR ERVL 2267 2463 -3191 301 183 17 0 chr17 27876414 27876474 -61628079 - MIR3 SINE MIR -53 155 95 1222 169 68 0 chr17 27876985 27877222 -61627331 + AluJo SINE Alu 58 310 -2 1328 104 0 16 chr17 27877330 27877523 -61627030 + MER30B DNA MER1_type 1 190 0 725 165 0 0 chr17 27877898 27878013 -61626540 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr17 27878015 27878041 -61626512 + AT_rich Low_complexity Low_complexity 1 26 0 240 184 333 35 chr17 27878533 27878620 -61625933 - MER103 DNA DNA -46 120 8 543 43 110 55 chr17 27878915 27879079 -61625474 + (AAATG)n Simple_repeat Simple_repeat 5 177 0 651 58 116 0 chr17 27879129 27879284 -61625269 + (AAATG)n Simple_repeat Simple_repeat 5 177 0 774 69 117 16 chr17 27879298 27880146 -61624407 + (AAATG)n Simple_repeat Simple_repeat 1 933 0 1672 137 88 21 chr17 27880284 27880613 -61623940 + Tigger2 DNA MER2_type 2358 2708 -10 22 56 0 0 chr17 27880839 27880875 -61623678 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr17 27881493 27881528 -61623025 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr17 27882395 27882418 -61622135 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 21 0 0 0 chr17 27882697 27882718 -61621835 + AT_rich Low_complexity Low_complexity 1 21 0 2150 122 0 3 chr17 27882787 27883091 -61621462 - AluSx SINE Alu -7 305 3 404 343 88 20 chr17 27883354 27883707 -61620846 - L1MEd LINE L1 -3303 2826 2450 257 155 17 0 chr17 27883716 27883774 -61620779 + (TG)n Simple_repeat Simple_repeat 2 60 0 360 0 0 0 chr17 27884131 27884171 -61620382 + (TA)n Simple_repeat Simple_repeat 1 40 0 2120 108 0 13 chr17 27884297 27884604 -61619949 + AluSg SINE Alu 1 303 -7 295 325 103 32 chr17 27885061 27885803 -61618750 - L1MEd LINE L1 -4886 1233 530 21 36 0 0 chr17 27887722 27887750 -61616803 + AT_rich Low_complexity Low_complexity 1 28 0 226 218 0 73 chr17 27888109 27888164 -61616389 - LTR16C LTR ERVL -358 133 83 241 346 0 0 chr17 27890671 27890752 -61613801 + (CA)n Simple_repeat Simple_repeat 2 82 0 32 0 0 0 chr17 27890942 27890974 -61613579 + AT_rich Low_complexity Low_complexity 1 32 0 1690 198 24 0 chr17 27891026 27891365 -61613188 + MER7A DNA MER2_type 2 346 0 607 255 102 45 chr17 27891984 27892264 -61612289 - MER77 LTR ERV1 -6 599 323 33 43 0 0 chr17 27892382 27892429 -61612124 + AT_rich Low_complexity Low_complexity 1 47 0 4556 257 66 17 chr17 27892438 27894235 -61610318 + L1MB5 LINE L1 3565 5445 -729 1858 205 42 7 chr17 27894251 27894685 -61609868 + L1MB5 LINE L1 5562 6010 -164 261 154 123 31 chr17 27895335 27895400 -61609153 + MIR SINE MIR 87 157 -105 854 313 92 17 chr17 27896069 27896602 -61607951 + L1ME1 LINE L1 5585 6157 -9 246 288 36 18 chr17 27896837 27896948 -61607605 + (CAGA)n Simple_repeat Simple_repeat 3 115 0 471 35 0 0 chr17 27898153 27898210 -61606343 + (TG)n Simple_repeat Simple_repeat 2 58 0 917 120 0 0 chr17 27899383 27899508 -61605045 - FLAM_C SINE Alu -18 125 1 776 222 97 37 chr17 27899773 27899989 -61604564 + MER58B DNA MER1_type 113 341 0 213 116 23 23 chr17 27899989 27900032 -61604521 + L2 LINE L2 3196 3238 -75 186 224 0 0 chr17 27900077 27900126 -61604427 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 1432 153 55 0 chr17 27900584 27900839 -61603714 + MLT1B LTR MaLR 1 269 -121 1207 263 27 0 chr17 27900855 27901156 -61603397 + ERVL LTR ERVL 4334 4642 -1122 261 281 52 0 chr17 27901321 27901417 -61603136 + MLT1D LTR MaLR 1 101 -404 960 212 81 101 chr17 27901517 27901888 -61602665 + MLT1D LTR MaLR 97 505 0 304 225 297 0 chr17 27902395 27902506 -61602047 + MLT1E1 LTR MaLR 8 151 -503 292 250 24 0 chr17 27902513 27902597 -61601956 + MLT1E1 LTR MaLR 291 376 -278 247 171 0 0 chr17 27902604 27902645 -61601908 - L1M4 LINE L1 -2572 3574 3534 2746 141 19 2 chr17 27902647 27903072 -61601481 + MSTB1 LTR MaLR 1 432 0 2932 177 4 15 chr17 27903084 27903626 -61600927 - L1MB4 LINE L1 -256 5924 5389 186 43 0 0 chr17 27904473 27904496 -61600057 + (TATG)n Simple_repeat Simple_repeat 2 24 0 234 23 70 0 chr17 27905695 27905738 -61598815 + (CAAA)n Simple_repeat Simple_repeat 4 49 0 993 267 103 58 chr17 27906436 27906493 -61598060 + L1M4 LINE L1 4644 4697 -1449 1763 158 52 0 chr17 27906493 27906784 -61597769 + AluSx SINE Alu 1 306 -6 993 267 103 58 chr17 27906784 27907347 -61597206 + L1M4 LINE L1 4697 5292 -854 351 0 0 0 chr17 27909096 27909135 -61595418 + (CA)n Simple_repeat Simple_repeat 2 40 0 502 331 49 25 chr17 27909139 27909710 -61594843 + L1MC4 LINE L1 4723 5307 -839 486 281 153 17 chr17 27910221 27910573 -61593980 + MLT1H1 LTR MaLR 34 433 -122 2190 153 71 19 chr17 27912174 27912585 -61591968 + MSTB1 LTR MaLR 1 432 0 15643 109 36 10 chr17 27913133 27913450 -61591103 - Tigger1 DNA MER2_type 0 2418 2111 1894 154 22 19 chr17 27913450 27913761 -61590792 - AluJo SINE Alu 0 312 1 15643 109 36 10 chr17 27913761 27915760 -61588793 - Tigger1 DNA MER2_type -307 2111 42 1311 218 48 36 chr17 27916413 27916628 -61587925 + MER65C LTR ERV1 100 322 -139 5736 100 12 16 chr17 27916628 27917783 -61586770 - L1PA14 LINE L1 0 6161 5007 2192 151 0 23 chr17 27917783 27918128 -61586425 - MER1B DNA MER1_type 0 337 1 5736 100 12 16 chr17 27918128 27918497 -61586056 - L1PA14 LINE L1 -1154 5007 4638 1311 218 48 36 chr17 27918497 27918639 -61585914 + MER65C LTR ERV1 322 461 0 1477 159 41 57 chr17 27921637 27921952 -61582601 + AluJo SINE Alu 3 312 0 419 275 6 33 chr17 27922652 27922834 -61581719 + (TATG)n Simple_repeat Simple_repeat 4 180 0 * 488 322 0 6 chr17 27922723 27922903 -61581650 + (TG)n Simple_repeat Simple_repeat 2 180 0 215 359 0 9 chr17 27922864 27922970 -61581583 + (TATG)n Simple_repeat Simple_repeat 2 106 0 * 23379 38 1 1 chr17 27923813 27927413 -61577140 + L1PA3 LINE L1 2555 6155 0 1722 207 30 62 chr17 27927420 27927457 -61577096 + L1MC4 LINE L1 5313 5350 -824 2011 129 0 7 chr17 27927457 27927744 -61576809 + AluSc SINE Alu 6 290 -19 1722 207 30 62 chr17 27927744 27928480 -61576073 + L1MC4 LINE L1 5350 5665 -509 * 2033 181 9 48 chr17 27928150 27928604 -61575949 + L1MB4 LINE L1 5693 6128 -52 231 204 0 0 chr17 27929473 27929522 -61575031 - MIR SINE MIR -56 206 158 2781 43 26 3 chr17 27929537 27929883 -61574670 - L1PA7 LINE L1 -30 6124 5771 1548 180 183 3 chr17 27930076 27930426 -61574127 - LOR1b LTR ERV1 0 461 49 1619 135 19 52 chr17 27930891 27931158 -61573395 - AluSq SINE Alu -17 296 39 514 231 0 10 chr17 27931158 27931262 -61573291 - FLAM_A SINE Alu -27 115 13 240 300 0 12 chr17 27931291 27931371 -61573182 + L1ME1 LINE L1 3492 3570 -2576 2012 247 59 44 chr17 27931562 27932312 -61572241 + L1ME1 LINE L1 5405 6165 -1 284 260 13 0 chr17 27933241 27933318 -61571235 + L1ME3A LINE L1 5885 5962 -208 1869 166 0 7 chr17 27933327 27933629 -61570924 + AluSx SINE Alu 1 300 -12 418 157 147 10 chr17 27933640 27933742 -61570811 + L1MA4A LINE L1 6035 6150 -153 1454 206 29 7 chr17 27933743 27934019 -61570534 - AluJo SINE Alu -30 282 1 410 231 0 0 chr17 27934286 27934364 -61570189 + AluJ/FLAM SINE Alu 2 79 -233 1605 246 50 4 chr17 27934365 27934841 -61569712 + L1M4 LINE L1 4855 5352 -794 1845 197 50 134 chr17 27934852 27934919 -61569634 + L1MB7 LINE L1 5040 5111 -1067 2103 121 0 0 chr17 27934919 27935236 -61569317 + AluY SINE Alu 1 311 0 1845 197 50 134 chr17 27935236 27935607 -61568946 + L1MB7 LINE L1 5111 5511 -667 1527 172 3 42 chr17 27935607 27935892 -61568661 + AluJb SINE Alu 22 295 -17 1845 197 50 134 chr17 27935892 27936443 -61568110 + L1MB7 LINE L1 5511 5943 -235 349 232 49 0 chr17 27936511 27936593 -61567960 + L1MB7 LINE L1 6090 6175 -9 1411 224 27 10 chr17 27938474 27938768 -61565785 + AluJo SINE Alu 1 299 -13 935 223 131 14 chr17 27938887 27939170 -61565383 + MER33 DNA MER1_type 8 323 -1 472 232 54 9 chr17 27939816 27939928 -61564625 - Tigger1 DNA MER2_type 0 2418 2302 * 1642 169 30 7 chr17 27939926 27940228 -61564325 - Tigger1 DNA MER2_type -374 2044 1736 1908 121 4 4 chr17 27940250 27940514 -61564039 - AluSp SINE Alu -31 282 19 3032 125 18 41 chr17 27940592 27940862 -61563691 - Tigger1 DNA MER2_type -670 1748 1473 1839 168 14 0 chr17 27940862 27941153 -61563400 - AluSg SINE Alu -15 295 1 3032 125 18 41 chr17 27941153 27941187 -61563366 - Tigger1 DNA MER2_type -945 1473 1440 1206 228 13 45 chr17 27941187 27941499 -61563054 + AluJb SINE Alu 1 302 -10 3032 125 18 41 chr17 27941499 27941705 -61562848 - Tigger1 DNA MER2_type -978 1440 1249 24537 75 5 2 chr17 27941711 27944895 -61559658 + L1P LINE L1 7 3199 -2947 37627 50 6 7 chr17 27944995 27948905 -61555648 + L1M LINE L1 600 4505 -1654 9409 32 11 215 chr17 27948905 27950645 -61553908 + SVA Other Other 1 1386 0 37627 50 6 7 chr17 27950645 27951462 -61553091 + L1M LINE L1 4505 5321 -838 1239 47 0 13 chr17 27951470 27951620 -61552933 + L1PA4 LINE L1 6008 6155 0 6889 155 40 3 chr17 27951620 27952807 -61551746 - Tigger1 DNA MER2_type -1160 1258 29 1953 128 20 30 chr17 27953389 27953685 -61550868 + AluSx SINE Alu 1 293 -19 1569 156 21 94 chr17 27954030 27954370 -61550183 + AluYb8 SINE Alu 1 315 -3 332 307 73 15 chr17 27954834 27955039 -61549514 - L1ME4a LINE L1 -260 5861 5645 27 29 0 0 chr17 27955349 27955383 -61549170 + AT_rich Low_complexity Low_complexity 1 34 0 8218 20 0 0 chr17 27955470 27956567 -61547986 - L1PA2 LINE L1 -5 6150 5053 27 0 0 0 chr17 27956945 27956972 -61547581 + AT_rich Low_complexity Low_complexity 1 27 0 189 154 0 0 chr17 27957359 27957398 -61547155 + CT-rich Low_complexity Low_complexity 2 40 0 1621 229 83 44 chr17 27957889 27958310 -61546243 - L1MCa LINE L1 -5040 1386 936 2478 61 3 0 chr17 27958310 27958620 -61545933 - AluY SINE Alu 0 311 1 1621 229 83 44 chr17 27958620 27958767 -61545786 - L1MCa LINE L1 -5490 936 796 1120 181 47 0 chr17 27960376 27960569 -61543984 + AluJo SINE Alu 76 277 -35 4153 150 64 10 chr17 27960599 27961377 -61543176 + L1MA8 LINE L1 5470 6289 -2 962 130 6 0 chr17 27961528 27961705 -61542848 + (GAATG)n Satellite Satellite 3 180 0 936 143 0 0 chr17 27961725 27961893 -61542660 + (GAATG)n Satellite Satellite 5 172 0 294 182 61 0 chr17 27961904 27961970 -61542583 + AluJ/FRAM SINE Alu 225 294 -8 1074 122 0 0 chr17 27961970 27962113 -61542440 + (GAGTG)n Simple_repeat Simple_repeat 1 323 0 1074 122 0 0 chr17 27962113 27962293 -61542260 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 322 224 15 0 chr17 27962560 27962627 -61541926 + AluJ/FRAM SINE Alu 225 292 -10 250 103 0 35 chr17 27962628 27962686 -61541867 + (GAATG)n Simple_repeat Simple_repeat 1 56 0 32339 32 2 0 chr17 27962791 27966839 -61537714 + L1P1 LINE L1 1541 5594 -561 38679 44 40 2 chr17 27966939 27971737 -61532816 - L1P LINE L1 -1153 4993 13 2506 75 0 10 chr17 27972535 27972843 -61531710 + AluY SINE Alu 1 305 -6 877 244 4 21 chr17 27972845 27973079 -61531474 + AluJo SINE Alu 81 310 -2 21 36 0 0 chr17 27973130 27973158 -61531395 + AT_rich Low_complexity Low_complexity 1 28 0 1646 182 14 7 chr17 27973253 27973550 -61531003 + AluSx SINE Alu 1 299 -13 1662 222 11 3 chr17 27974686 27975033 -61529520 + L1MB3 LINE L1 5482 5831 -352 772 188 0 0 chr17 27975033 27975150 -61529403 + FLAM_C SINE Alu 1 117 -16 252 109 130 0 chr17 27975168 27975214 -61529339 + L1M3 LINE L1 5820 5871 -309 * 288 196 0 6 chr17 27975198 27975263 -61529290 + L1PB4 LINE L1 6091 6143 -13 12240 241 68 28 chr17 27975279 27978748 -61525805 + L1P4 LINE L1 116 3443 -4160 2079 128 24 0 chr17 27978748 27979045 -61525508 - AluSx SINE Alu -7 305 2 12240 241 68 28 chr17 27979045 27979648 -61524905 + L1P4 LINE L1 3443 4020 -3583 2103 114 3 3 chr17 27979648 27979937 -61524616 + AluSq SINE Alu 1 289 -24 12240 241 68 28 chr17 27979937 27981001 -61523552 + L1P4 LINE L1 4020 5040 -2563 1997 130 19 26 chr17 27981001 27981309 -61523244 + AluSq SINE Alu 4 309 -4 12240 241 68 28 chr17 27981309 27982108 -61522445 + L1P4 LINE L1 5040 7159 -444 234 243 22 39 chr17 27982323 27982504 -61522049 + (CTA)n Simple_repeat Simple_repeat 2 179 0 339 221 95 11 chr17 27982530 27982617 -61521936 + L1P5 LINE L1 5685 5782 -374 198 0 0 0 chr17 27982617 27982639 -61521914 + (TG)n Simple_repeat Simple_repeat 2 23 0 223 256 24 24 chr17 27982675 27982800 -61521753 + (TTATA)n Simple_repeat Simple_repeat 1 125 0 1195 165 27 58 chr17 27982800 27983060 -61521493 + L1MA5 LINE L1 5782 6033 -267 2249 86 10 0 chr17 27983287 27983577 -61520976 + AluY SINE Alu 1 293 -18 12668 32 6 0 chr17 27984418 27986607 -61517946 - L1PA3 LINE L1 0 6155 3958 2103 123 3 0 chr17 27986985 27987270 -61517283 - AluSg SINE Alu -20 290 5 2052 168 89 22 chr17 27987539 27987997 -61516556 - L1MA9 LINE L1 -20 6292 5804 222 150 0 0 chr17 27988004 27988044 -61516509 + (CA)n Simple_repeat Simple_repeat 1 40 0 802 248 68 0 chr17 27988084 27988245 -61516308 - AluJo SINE Alu -54 258 87 1976 131 7 0 chr17 27988245 27988520 -61516033 - AluSg SINE Alu -33 277 1 1463 235 25 16 chr17 27988521 27989020 -61515533 - L1MA9 LINE L1 -581 5722 5205 262 250 14 42 chr17 27990362 27990434 -61514119 - MIR SINE MIR -192 70 1 197 147 29 0 chr17 27991721 27991755 -61512798 + MIR SINE MIR 114 148 -60 1747 142 26 35 chr17 27991796 27992107 -61512446 + AluJo SINE Alu 4 311 -1 2183 119 3 0 chr17 27992145 27992447 -61512106 + AluSg1 SINE Alu 1 303 -6 22 0 0 0 chr17 27992447 27992469 -61512084 + AT_rich Low_complexity Low_complexity 1 22 0 3416 181 11 9 chr17 27995263 27995916 -61508637 - L1P LINE L1 -1059 5087 4434 923 225 53 15 chr17 27995915 27996339 -61508214 + L1M2 LINE L1 5096 5667 -624 * 4163 142 12 21 chr17 27996119 27996844 -61507709 + L1PA15 LINE L1 5446 6164 -1 714 262 71 33 chr17 27996864 27997074 -61507479 - MIR SINE MIR -44 218 1 203 333 35 11 chr17 27997112 27997193 -61507360 - MIR SINE MIR -22 240 158 517 319 39 9 chr17 27997193 27997422 -61507131 + MIR SINE MIR 2 237 -25 1503 203 0 22 chr17 27998871 27999186 -61505367 + AluJo SINE Alu 1 308 -4 513 235 35 0 chr17 28001425 28001540 -61503013 - MER3 DNA MER1_type -74 135 17 1587 199 3 29 chr17 28003377 28003693 -61500860 + AluJb SINE Alu 1 308 -4 1486 241 177 21 chr17 28004175 28004785 -61499768 + L2 LINE L2 1889 2593 -721 341 264 36 18 chr17 28006488 28006598 -61497955 + MIR SINE MIR 95 206 -56 215 331 91 26 chr17 28006676 28006775 -61497778 - L3 LINE CR1 -208 1369 1278 2019 132 0 7 chr17 28006775 28007056 -61497497 + AluSc SINE Alu 1 279 -30 612 62 0 0 chr17 28007056 28007137 -61497416 + (TA)n Simple_repeat Simple_repeat 1 81 0 215 331 91 26 chr17 28007137 28007190 -61497363 - L3 LINE CR1 -298 1279 1206 237 280 19 9 chr17 28007624 28007731 -61496822 + L1MC5 LINE L1 7817 7924 -37 1661 170 13 16 chr17 28007771 28008083 -61496470 + AluJo SINE Alu 1 311 -1 188 35 35 0 chr17 28008628 28008657 -61495896 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 8444 202 90 43 chr17 28010480 28013242 -61491311 + L1 LINE L1 2219 4849 -1297 2260 110 0 0 chr17 28013242 28013534 -61491019 + AluY SINE Alu 1 292 -19 8444 202 90 43 chr17 28013534 28013578 -61490975 + L1 LINE L1 4849 4889 -1257 2049 135 0 3 chr17 28013578 28013867 -61490686 + AluY SINE Alu 1 288 -23 8444 202 90 43 chr17 28013867 28014024 -61490529 + L1 LINE L1 4889 5323 -823 231 366 0 0 chr17 28014942 28015035 -61489518 + CT-rich Low_complexity Low_complexity 1 93 0 409 265 104 51 chr17 28016106 28016754 -61487799 + HSREP522 Satellite telomeric 1 682 -286 210 224 26 26 chr17 28017957 28018033 -61486520 + CT-rich Low_complexity Low_complexity 3 78 0 186 191 0 0 chr17 28018039 28018081 -61486472 + T-rich Low_complexity Low_complexity 3 44 0 790 89 122 0 chr17 28018247 28018370 -61486183 - MER85 DNA T2_type -1 138 1 1068 209 26 29 chr17 28019408 28019681 -61484872 + LOR1-int LTR ERV1 2081 2352 -3594 825 151 47 31 chr17 28019669 28019903 -61484650 + LOR1-int LTR ERV1 1829 2572 -2443 * 2033 180 65 4 chr17 28019904 28020364 -61484189 + LOR1-int LTR ERV1 2743 3230 -2716 2406 194 16 30 chr17 28021223 28021930 -61482623 + L1MB8 LINE L1 4132 4953 -1193 1982 194 48 60 chr17 28021930 28022532 -61482021 + L1MB8 LINE L1 5584 6178 0 5277 109 10 25 chr17 28022576 28022928 -61481625 - L1PB1 LINE L1 -3 6148 5792 249 33 0 0 chr17 28022928 28022958 -61481595 + (TA)n Simple_repeat Simple_repeat 2 31 0 5277 109 10 25 chr17 28022958 28023295 -61481258 - L1PB1 LINE L1 -359 5792 5451 1585 120 117 29 chr17 28023295 28023569 -61480984 - AluSc SINE Alu -11 298 1 5277 109 10 25 chr17 28023569 28024018 -61480535 - L1PB1 LINE L1 -700 5451 5006 2249 50 0 4 chr17 28024301 28024582 -61479971 - L1PA3 LINE L1 -3 6152 5873 778 188 54 5 chr17 28025204 28025390 -61479163 + Charlie4 DNA MER1_type 62 256 -1705 40111 40 23 1 chr17 28025390 28031402 -61473151 - L1PA2 LINE L1 -7 6148 1 28 0 0 0 chr17 28031448 28031476 -61473077 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 28031843 28031866 -61472687 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr17 28032439 28032475 -61472078 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr17 28032579 28032609 -61471944 + AT_rich Low_complexity Low_complexity 1 30 0 3134 152 66 15 chr17 28032846 28033450 -61471103 - MER41B LTR ERV1 0 635 1 1474 196 101 39 chr17 28033590 28034028 -61470525 - LTR8A LTR ERV1 -4 723 259 1761 91 4 0 chr17 28034195 28034449 -61470104 - LTR8A LTR ERV1 -472 255 1 844 223 28 9 chr17 28035297 28035508 -61469045 - MER58A DNA MER1_type -9 215 1 282 174 43 0 chr17 28037058 28037196 -61467357 + (TA)n Simple_repeat Simple_repeat 2 145 0 333 0 0 0 chr17 28037314 28037351 -61467202 + (TG)n Simple_repeat Simple_repeat 2 38 0 304 266 7 130 chr17 28037352 28037506 -61467047 + L1MC4 LINE L1 6602 6736 -1306 415 318 0 66 chr17 28037650 28037848 -61466705 + MIR SINE MIR 28 212 -50 293 145 16 0 chr17 28037874 28037936 -61466617 + CT-rich Low_complexity Low_complexity 2 64 0 201 121 0 0 chr17 28038055 28038088 -61466465 + (T)n Simple_repeat Simple_repeat 1 33 0 216 158 0 0 chr17 28038663 28038701 -61465852 + (TA)n Simple_repeat Simple_repeat 2 39 0 30 59 0 0 chr17 28038766 28038817 -61465736 + AT_rich Low_complexity Low_complexity 1 51 0 2195 93 0 13 chr17 28040320 28040622 -61463931 + AluY SINE Alu 1 298 -13 536 242 21 67 chr17 28040901 28040944 -61463609 - MER5A DNA MER1_type -4 185 142 1869 128 31 28 chr17 28040944 28041234 -61463319 - AluSx SINE Alu -21 291 1 536 242 21 67 chr17 28041234 28041384 -61463169 - MER5A DNA MER1_type -47 142 1 256 292 329 0 chr17 28041398 28041535 -61463018 + MER5A DNA MER1_type 7 188 -1 542 323 77 38 chr17 28041824 28042655 -61461898 + MERVL LTR ERVL 4117 4998 -766 986 181 28 5 chr17 28042763 28042978 -61461575 - L1MB3 LINE L1 -46 6137 5918 1725 179 22 0 chr17 28042978 28043296 -61461257 - LOR1b LTR ERV1 0 461 137 2829 179 17 55 chr17 28043384 28043772 -61460781 - L1MB3 LINE L1 -249 5922 5570 1243 158 29 0 chr17 28043772 28044012 -61460541 - L1MA8 LINE L1 -18 6273 6027 2829 179 17 55 chr17 28044012 28044314 -61460239 - L1MB3 LINE L1 -601 5570 5258 26 64 0 0 chr17 28044383 28044430 -61460123 + AT_rich Low_complexity Low_complexity 1 47 0 720 238 38 0 chr17 28044486 28044501 -61460052 + L1 LINE L1 4232 4245 -1901 1527 115 26 9 chr17 28044501 28044727 -61459826 - MER30 DNA MER1_type 0 230 1 720 238 38 0 chr17 28044727 28044740 -61459813 + L1 LINE L1 4245 4256 -1890 312 27 0 0 chr17 28044740 28044777 -61459776 + (CA)n Simple_repeat Simple_repeat 2 38 0 720 238 38 0 chr17 28044777 28044987 -61459566 + L1 LINE L1 4256 4480 -1666 24 53 0 0 chr17 28045718 28045756 -61458797 + AT_rich Low_complexity Low_complexity 1 38 0 1968 134 7 24 chr17 28046728 28047026 -61457527 + AluSx SINE Alu 1 293 -19 300 27 0 0 chr17 28047177 28047214 -61457339 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 277 31 46 chr17 28047844 28047909 -61456644 - MIR SINE MIR -161 101 38 852 263 22 5 chr17 28047918 28048142 -61456411 - MLT1E LTR MaLR 0 593 366 1711 85 0 0 chr17 28049066 28049277 -61455276 - AluY SINE Alu -15 296 86 228 105 0 0 chr17 28049277 28049315 -61455238 - AluY SINE Alu -95 38 1 26 0 0 0 chr17 28050857 28050883 -61453670 + AT_rich Low_complexity Low_complexity 1 26 0 1759 151 6 35 chr17 28050883 28051194 -61453359 + AluSx SINE Alu 1 302 -10 1994 141 21 0 chr17 28051312 28051603 -61452950 + AluSx SINE Alu 1 297 -15 269 146 11 67 chr17 28052650 28052739 -61451814 + GA-rich Low_complexity Low_complexity 1 84 0 761 214 82 0 chr17 28053033 28053215 -61451338 + MER6B DNA MER2_type 1 197 -13 278 115 19 0 chr17 28053223 28053275 -61451278 + (CA)n Simple_repeat Simple_repeat 2 54 0 3112 137 23 25 chr17 28053512 28054074 -61450479 + MER34B LTR ERV1 1 561 -4 365 189 14 0 chr17 28054622 28054696 -61449857 + MER67D LTR ERV1 5 79 -435 15750 43 3 0 chr17 28054716 28057411 -61447142 - L1PA4 LINE L1 -11 6144 3443 3205 47 4 0 chr17 28057411 28057862 -61446691 + L1PA4 LINE L1 2999 3451 -2695 1150 210 139 52 chr17 28057862 28058266 -61446287 + MER67D LTR ERV1 71 509 -5 21 0 0 0 chr17 28058316 28058337 -61446216 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr17 28059941 28059973 -61444580 + AT_rich Low_complexity Low_complexity 1 32 0 205 196 18 54 chr17 28061481 28061537 -61443016 + GA-rich Low_complexity Low_complexity 1 54 0 233 268 152 6 chr17 28062279 28062443 -61442110 + L1M4 LINE L1 4466 4653 -1493 738 286 103 15 chr17 28062476 28063134 -61441419 + L1ME2 LINE L1 3530 4245 -1901 4654 161 18 11 chr17 28063142 28064015 -61440538 + Tigger1 DNA MER2_type 10 888 -1530 6837 188 14 45 chr17 28064015 28066300 -61438253 + L1PA13 LINE L1 3886 6163 0 216 0 0 0 chr17 28066904 28066928 -61437625 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 458 233 0 130 chr17 28066942 28067157 -61437396 - MER58C DNA MER1_type -1 214 28 824 286 107 10 chr17 28067218 28067697 -61436856 + L1ME2 LINE L1 4878 5402 -744 543 259 60 42 chr17 28067695 28067911 -61436642 + L1ME2 LINE L1 5916 6135 -29 * 1835 174 10 0 chr17 28068342 28068640 -61435913 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr17 28068986 28069007 -61435546 + AT_rich Low_complexity Low_complexity 1 21 0 1879 160 35 20 chr17 28069470 28069813 -61434740 + THE1B LTR MaLR 1 348 -16 819 217 38 58 chr17 28070228 28070623 -61433930 + MLT1A2 LTR MaLR 1 457 0 210 128 0 0 chr17 28071610 28071649 -61432904 + (TG)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr17 28071958 28071980 -61432573 + AT_rich Low_complexity Low_complexity 1 22 0 16261 39 9 0 chr17 28072012 28074265 -61430288 + L1P1 LINE L1 3285 5547 -608 387 184 0 97 chr17 28074369 28074430 -61430123 - L1M4 LINE L1 -2605 3541 3494 2476 53 10 0 chr17 28074430 28074734 -61429819 - AluY SINE Alu -4 307 1 387 184 0 97 chr17 28074734 28074786 -61429767 - L1M4 LINE L1 -2652 3494 3439 2065 118 0 14 chr17 28074793 28075082 -61429471 - AluSx SINE Alu -3 309 25 402 73 0 0 chr17 28075082 28075137 -61429416 + Tigger3(Golem) DNA MER2_type 2690 2744 -285 1117 214 25 47 chr17 28075164 28075249 -61429304 - L1M4 LINE L1 -2697 3449 3364 1592 175 21 24 chr17 28075249 28075540 -61429013 + AluJo SINE Alu 1 290 -22 1117 214 25 47 chr17 28075540 28075861 -61428692 - L1M4 LINE L1 -2782 3364 3052 2310 206 43 4 chr17 28075873 28076436 -61428117 + L1ME1 LINE L1 4795 5379 -767 4934 115 35 19 chr17 28076438 28077290 -61427263 - Tigger3(Golem) DNA MER2_type 0 3029 2164 1759 209 28 73 chr17 28077290 28077855 -61426698 + L1ME1 LINE L1 5621 6160 -6 1868 184 3 0 chr17 28077855 28078165 -61426388 + AluJb SINE Alu 1 311 -1 432 230 184 20 chr17 28078353 28078549 -61426004 - MLT1H1 LTR MaLR -8 547 320 1295 177 35 131 chr17 28078644 28079102 -61425451 + MLT2D LTR ERVL 1 414 0 417 319 21 26 chr17 28079162 28079353 -61425200 - L1M4 LINE L1 -1945 4201 4012 1075 182 25 43 chr17 28079362 28079642 -61424911 + L1MA4 LINE L1 5939 6213 -87 239 0 32 0 chr17 28079645 28079676 -61424877 + (TTA)n Simple_repeat Simple_repeat 3 34 0 2785 42 0 0 chr17 28079676 28080006 -61424547 - L1PA3 LINE L1 -18 6137 5808 1998 137 3 7 chr17 28080297 28080590 -61423963 - AluSx SINE Alu -14 298 7 295 197 43 68 chr17 28080596 28080713 -61423840 - L1M4 LINE L1 -2170 3976 3863 326 333 38 12 chr17 28080754 28080994 -61423559 - L1M4 LINE L1 -2378 3768 3523 1885 189 0 3 chr17 28081039 28081509 -61423044 - AluJb SINE Alu 0 469 1 1863 164 0 22 chr17 28081509 28081827 -61422726 - AluJb SINE Alu -1 311 1 330 301 101 42 chr17 28082071 28082552 -61422001 - L1M4 LINE L1 -2924 3222 2682 2066 124 7 0 chr17 28082552 28082835 -61421718 - AluSx SINE Alu -25 287 3 330 301 101 42 chr17 28082835 28083085 -61421468 - L1M4 LINE L1 -3464 2682 2448 1786 120 0 4 chr17 28083087 28083328 -61421225 + AluSx SINE Alu 64 303 -9 341 171 0 0 chr17 28083437 28083507 -61421046 + MER96B DNA MER1_type? 296 365 -52 305 266 44 83 chr17 28083614 28083731 -61420822 + L1MC4 LINE L1 7822 7927 -115 1565 142 0 17 chr17 28083731 28083970 -61420583 + AluSx SINE Alu 1 235 -77 305 266 44 83 chr17 28083970 28084081 -61420472 + L1MC4 LINE L1 7927 8041 -1 792 141 8 0 chr17 28084531 28084652 -61419901 + MER5A DNA MER1_type 66 187 -2 183 189 27 0 chr17 28085082 28085119 -61419434 - MER5B DNA MER1_type -123 55 18 213 94 0 0 chr17 28085228 28085260 -61419293 + (CA)n Simple_repeat Simple_repeat 1 32 0 290 259 29 107 chr17 28085998 28086203 -61418350 + LTR67 LTR ERVL 2 190 -367 207 0 0 0 chr17 28086352 28086375 -61418178 + (T)n Simple_repeat Simple_repeat 1 23 0 271 185 0 0 chr17 28086423 28086477 -61418076 - L1MA7 LINE L1 -168 6123 6070 274 203 29 14 chr17 28086541 28086610 -61417943 + LTR67 LTR ERVL 488 557 0 489 285 13 13 chr17 28086684 28086835 -61417718 + MIR SINE MIR 2 152 -110 1846 163 28 0 chr17 28086856 28087145 -61417408 + AluJo SINE Alu 1 297 -15 746 201 34 45 chr17 28087145 28087324 -61417229 + AluJo/FRAM SINE Alu 134 310 -2 304 283 22 0 chr17 28087346 28087438 -61417115 + MIR SINE MIR 163 256 -6 196 200 44 22 chr17 28087677 28087722 -61416831 - L2 LINE L2 -14 3258 3213 406 337 16 94 chr17 28088086 28088469 -61416084 - L2 LINE L2 -14 3258 2906 1043 292 24 21 chr17 28088601 28088984 -61415569 - MLT1J2 LTR MaLR 0 450 67 2013 191 98 17 chr17 28089330 28089801 -61414752 + LTR22 LTR ERVK 1 509 0 234 0 0 0 chr17 28090472 28090498 -61414055 + (T)n Simple_repeat Simple_repeat 1 26 0 6190 76 22 42 chr17 28090501 28091678 -61412875 - SVA Other Other -554 1386 433 4911 88 28 55 chr17 28091880 28092701 -61411852 - SVA Other Other -519 867 68 1161 16 0 48 chr17 28092701 28092890 -61411663 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 620 168 109 22 chr17 28092993 28093130 -61411423 + FRAM SINE Alu 4 152 -24 38 22 0 0 chr17 28093512 28093557 -61410996 + AT_rich Low_complexity Low_complexity 1 45 0 1866 170 0 3 chr17 28093773 28094084 -61410469 + AluJo SINE Alu 1 310 -2 214 70 47 70 chr17 28094191 28094234 -61410319 + GA-rich Low_complexity Low_complexity 5 46 0 362 206 27 0 chr17 28094693 28094766 -61409787 - MIR SINE MIR -165 97 23 6788 70 40 0 chr17 28094929 28096496 -61408057 - L1PA7 LINE L1 -3 6151 4547 2069 171 61 9 chr17 28097794 28098234 -61406319 + MLT1D LTR MaLR 41 503 -2 1780 164 0 17 chr17 28098498 28098785 -61405768 + AluSx SINE Alu 9 290 -22 495 261 22 0 chr17 28099463 28099597 -61404956 - LTR67 LTR ERVL -13 544 408 711 271 98 8 chr17 28099980 28100216 -61404337 - MIR SINE MIR 0 262 6 210 143 0 0 chr17 28101233 28101268 -61403285 + (CATA)n Simple_repeat Simple_repeat 2 36 0 208 149 45 15 chr17 28101293 28101348 -61403205 + (TA)n Simple_repeat Simple_repeat 1 60 -9 2217 101 3 0 chr17 28101348 28101634 -61402919 - AluSg SINE Alu -23 287 1 208 149 45 15 chr17 28101634 28101645 -61402908 + (TA)n Simple_repeat Simple_repeat 60 69 0 1495 200 32 4 chr17 28101645 28101925 -61402628 - AluJo SINE Alu -24 288 1 5695 39 8 7 chr17 28101984 28102734 -61401819 + L1P LINE L1 1754 2504 -3642 476 317 77 10 chr17 28102968 28103176 -61401377 - MIR SINE MIR -29 233 12 757 238 44 20 chr17 28103356 28103608 -61400945 - MIR SINE MIR -3 259 2 188 311 0 0 chr17 28104439 28104500 -61400053 + L2 LINE L2 2866 2926 -346 2023 120 4 0 chr17 28104606 28104882 -61399671 + AluSx SINE Alu 24 300 -12 1040 184 8 5 chr17 28105590 28105716 -61398837 - ALR/Alpha Satellite centromeric -1 9504 9380 7612 76 7 14 chr17 28105716 28106730 -61397823 - LTR13 LTR ERVK 0 1007 1 1040 184 8 5 chr17 28106730 28115061 -61389492 - ALR/Alpha Satellite centromeric -125 9380 1 18776 42 1 3 chr17 28115063 28121130 -61383423 + L1PA3 LINE L1 3 6155 0 830 207 0 0 chr17 28121130 28121524 -61383029 - ALR/Alpha Satellite centromeric 0 394 1 1029 189 10 6 chr17 28121536 28122044 -61382509 - ALR/Alpha Satellite centromeric -4 14974 14469 7073 60 26 0 chr17 28122044 28122918 -61381635 + MER11D LTR ERVK 1 897 0 1029 189 10 6 chr17 28122918 28136453 -61368100 - ALR/Alpha Satellite centromeric -509 14469 1 851 197 19 7 chr17 28136468 28136753 -61367800 - ALR/Alpha Satellite centromeric -17 1881 1601 2176 112 0 3 chr17 28136753 28137073 -61367480 - AluY SINE Alu 0 311 1 851 197 19 7 chr17 28137073 28138327 -61366226 - ALR/Alpha Satellite centromeric -297 1601 1 285 51 0 0 chr17 28138334 28138373 -61366180 + (TA)n Simple_repeat Simple_repeat 1 39 0 922 190 6 3 chr17 28138391 28141480 -61363073 - ALR/Alpha Satellite centromeric 0 3097 1 11686 18 0 0 chr17 28141486 28143415 -61361138 + L1PA2 LINE L1 3961 5889 -266 971 178 12 10 chr17 28143415 28144224 -61360329 - ALR/Alpha Satellite centromeric -6 810 1 811 203 4 0 chr17 28144239 28144571 -61359982 - ALR/Alpha Satellite centromeric 0 333 1 419 297 102 33 chr17 28144757 28145269 -61359284 + SST1 Satellite centromeric 207 753 -810 241 312 52 68 chr17 28145628 28145997 -61358556 + SST1 Satellite centromeric 1132 1494 -69 188 145 40 13 chr17 28146037 28146113 -61358440 + (TG)n Simple_repeat Simple_repeat 1 78 0 611 295 112 70 chr17 28147097 28148512 -61356041 + SST1 Satellite centromeric 63 1536 -27 192 135 0 0 chr17 28148547 28148584 -61355969 + (TG)n Simple_repeat Simple_repeat 2 38 0 637 271 67 56 chr17 28149628 28150093 -61354460 + SST1 Satellite centromeric 132 601 -962 252 274 70 32 chr17 28150823 28150980 -61353573 + SST1 Satellite centromeric 1374 1536 -27 237 98 0 0 chr17 28151027 28151068 -61353485 + (TG)n Simple_repeat Simple_repeat 2 42 0 1040 194 6 2 chr17 28151692 28155482 -61349071 - ALR/Alpha Satellite centromeric 0 3804 1 4205 43 0 0 chr17 28155487 28155993 -61348560 - L1PA3 LINE L1 0 6155 5650 252 0 0 0 chr17 28206005 28206033 -61298520 + (A)n Simple_repeat Simple_repeat 1 28 0 206 274 0 41 chr17 28206041 28206114 -61298439 - MIR3 SINE MIR -46 162 93 377 272 58 0 chr17 28206229 28206332 -61298221 - L2 LINE L2 -13 3300 3192 26 0 0 0 chr17 28206403 28206429 -61298124 + AT_rich Low_complexity Low_complexity 1 26 0 931 226 107 16 chr17 28207171 28207480 -61297073 + Zaphod DNA AcHobo 3694 4030 -1 2104 147 0 3 chr17 28207726 28208038 -61296515 + AluSx SINE Alu 1 311 -1 2142 119 0 7 chr17 28208061 28208363 -61296190 + AluSg SINE Alu 1 300 -10 234 269 0 0 chr17 28208436 28208488 -61296065 + MER5A DNA MER1_type 55 106 -83 2078 126 0 0 chr17 28208501 28208778 -61295775 + AluSq SINE Alu 1 277 -36 727 191 13 13 chr17 28208878 28209030 -61295523 + L1M4 LINE L1 3544 3695 -2451 258 287 22 59 chr17 28209221 28209357 -61295196 - L1ME3A LINE L1 -9 6161 6031 1105 242 4 0 chr17 28209486 28209717 -61294836 + ERVL-F LTR ERVL 5106 5337 -427 463 130 9 157 chr17 28209713 28209760 -61294793 + ERVL-F LTR ERVL 4544 4568 -1196 * 2011 127 3 43 chr17 28209760 28210083 -61294470 - AluSx SINE Alu -1 311 2 463 130 9 157 chr17 28210083 28210143 -61294410 + ERVL-F LTR ERVL 4568 4635 -1129 923 242 118 36 chr17 28210144 28210508 -61294045 + ERVL-F LTR ERVL 5344 5737 -27 36 0 0 0 chr17 28210706 28210742 -61293811 + AT_rich Low_complexity Low_complexity 1 36 0 827 78 35 0 chr17 28210761 28210877 -61293676 - AluSq/x SINE Alu -193 120 1 1460 126 94 84 chr17 28211090 28211399 -61293154 - AluJo SINE Alu 0 312 1 206 32 32 0 chr17 28211502 28211533 -61293020 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1543 207 99 39 chr17 28211564 28212141 -61292412 + MLT2F LTR ERVL 3 660 -3 1449 118 41 0 chr17 28212239 28212460 -61292093 + MER30 DNA MER1_type 1 230 0 633 207 25 0 chr17 28212479 28212600 -61291953 - FAM SINE Alu -39 146 23 967 120 0 0 chr17 28212688 28212821 -61291732 + AluSq/x SINE Alu 1 133 -179 713 192 13 13 chr17 28212921 28213072 -61291481 + L1M4 LINE L1 3545 3695 -2451 297 248 8 43 chr17 28213148 28213265 -61291288 + L1M4 LINE L1 4517 4629 -1517 * 354 250 22 59 chr17 28213263 28213399 -61291154 - L1ME3A LINE L1 -9 6161 6031 1982 157 7 7 chr17 28213457 28213757 -61290796 + AluJb SINE Alu 1 300 -12 660 70 0 0 chr17 28214272 28214358 -61290195 + L1PA11 LINE L1 6089 6174 0 278 342 32 26 chr17 28214691 28214846 -61289707 - MLT1K LTR MaLR -215 373 218 235 143 48 0 chr17 28215480 28215522 -61289031 - MLT1L LTR MaLR -350 265 222 307 301 159 6 chr17 28215589 28215765 -61288788 - MLT1K LTR MaLR -372 216 14 374 171 107 17 chr17 28215907 28216021 -61288532 - MIR3 SINE MIR -37 171 51 2392 143 25 25 chr17 28216048 28216455 -61288098 + MLT2D LTR ERVL 1 407 -7 233 375 71 0 chr17 28216901 28217013 -61287540 + LTR67 LTR ERVL 97 216 -341 2175 101 93 6 chr17 28217021 28217366 -61287187 - THE1C LTR MaLR 0 375 1 2339 218 32 2 chr17 28217485 28217920 -61286633 - ERVL LTR ERVL -851 4913 4466 516 256 31 26 chr17 28217922 28218113 -61286440 - L1M4 LINE L1 -995 5151 4960 1075 146 6 0 chr17 28218118 28218276 -61286277 - AluJb SINE Alu -16 296 138 306 292 99 25 chr17 28218345 28218506 -61286047 - L1M4 LINE L1 -1310 4836 4664 2018 129 0 39 chr17 28218527 28218838 -61285715 + AluJb SINE Alu 1 299 -13 264 143 0 0 chr17 28219090 28219145 -61285408 + Alu SINE Alu 1 41 -260 2033 147 0 0 chr17 28219145 28219431 -61285122 + AluSx SINE Alu 11 296 -16 2262 115 3 0 chr17 28219759 28220054 -61284499 + AluSx SINE Alu 1 296 -16 217 270 126 9 chr17 28220058 28220169 -61284384 - MER5A DNA MER1_type -63 126 3 25 0 0 0 chr17 28220487 28220512 -61284041 + AT_rich Low_complexity Low_complexity 1 25 0 2810 74 6 0 chr17 28220512 28220865 -61283688 - THE1A LTR MaLR 0 355 1 2070 134 7 0 chr17 28220865 28221163 -61283390 - AluSx SINE Alu -11 301 2 825 285 104 40 chr17 28221614 28222146 -61282407 - L2 LINE L2 -9 3304 2739 468 45 30 0 chr17 28222165 28222232 -61282321 - MER41A LTR ERV1 -86 468 400 249 237 54 75 chr17 28222267 28222360 -61282193 - L2 LINE L2 -615 2699 2609 339 328 0 32 chr17 28224379 28224504 -61280049 + MIR3 SINE MIR 49 169 -39 423 121 30 0 chr17 28224956 28225022 -61279531 + AluJ/FRAM SINE Alu 232 299 -13 24 0 0 0 chr17 28225146 28225170 -61279383 + AT_rich Low_complexity Low_complexity 1 24 0 418 266 28 73 chr17 28225366 28225543 -61279010 + MIR SINE MIR 91 259 -3 1957 154 6 6 chr17 28225990 28226344 -61278209 + AluJb SINE Alu 1 354 0 258 280 0 76 chr17 28227348 28227466 -61277087 - MIR SINE MIR -55 153 50 185 154 0 26 chr17 28228476 28228515 -61276038 + L2 LINE L2 3234 3271 -1 2111 112 16 19 chr17 28228700 28229013 -61275540 + AluSx SINE Alu 1 312 0 190 283 98 11 chr17 28229695 28229787 -61274766 - MER5B DNA MER1_type -75 103 4 2047 138 0 0 chr17 28229792 28230119 -61274434 + AluSq SINE Alu 1 327 0 257 258 107 44 chr17 28230682 28230841 -61273712 + L2 LINE L2 2882 3050 -222 246 173 115 0 chr17 28231745 28231797 -61272756 - MIR SINE MIR -65 143 86 349 173 27 27 chr17 28232183 28232258 -61272295 - LTR67 LTR ERVL -479 78 4 844 196 14 0 chr17 28233299 28233466 -61271087 - AluJb SINE Alu 0 308 140 241 278 56 0 chr17 28233538 28233610 -61270943 + MLT1L LTR MaLR 209 284 -331 1942 111 80 3 chr17 28233623 28233912 -61270641 - AluSq SINE Alu -2 311 1 774 238 142 40 chr17 28234000 28234303 -61270250 - MER2 DNA MER2_type -8 337 4 762 249 26 9 chr17 28234307 28234536 -61270017 - L1MC4a LINE L1 -1854 5954 5722 235 196 0 20 chr17 28234600 28234651 -61269902 + MIR SINE MIR 85 134 -128 2205 132 30 63 chr17 28235110 28235756 -61268797 - L1MB8 LINE L1 -6 6172 5514 1126 139 43 24 chr17 28235756 28235965 -61268588 - L1PA16 LINE L1 0 6166 5954 2205 132 30 63 chr17 28235965 28236212 -61268341 - L1MB8 LINE L1 -664 5514 5261 1138 184 0 10 chr17 28236310 28236511 -61268042 + AluSx SINE Alu 1 199 -113 610 56 0 0 chr17 28236511 28236583 -61267970 + AluSq/x SINE Alu 67 138 -174 20427 105 11 12 chr17 28236604 28239570 -61264983 + L1P LINE L1 11 2971 -3175 2457 90 6 0 chr17 28239676 28239987 -61264566 - AluSp SINE Alu 0 313 1 388 220 64 50 chr17 28240024 28240165 -61264388 + HAL1 LINE L1 2364 2506 -1 646 47 0 0 chr17 28240322 28240407 -61264146 + SVA Other Other 1299 1383 -3 189 0 0 0 chr17 28240413 28240434 -61264119 + (TAAAAA)n Simple_repeat Simple_repeat 4 24 0 850 142 8 0 chr17 28240774 28240901 -61263652 + AluJb SINE Alu 166 293 -19 1855 125 10 56 chr17 28240904 28241243 -61263310 + AluSx SINE Alu 1 325 0 189 175 0 0 chr17 28241341 28241381 -61263172 + CT-rich Low_complexity Low_complexity 1 40 0 2152 109 0 0 chr17 28241403 28241679 -61262874 - AluSx SINE Alu -36 276 1 417 201 201 8 chr17 28243605 28243739 -61260814 + MIR SINE MIR 51 210 -52 196 342 43 43 chr17 28243879 28243996 -61260557 + MIR SINE MIR 47 163 -99 749 162 0 0 chr17 28244086 28244203 -61260350 + FLAM_C SINE Alu 1 117 -16 25 51 0 0 chr17 28244204 28244243 -61260310 + AT_rich Low_complexity Low_complexity 1 39 0 1132 136 12 0 chr17 28244243 28244405 -61260148 + AluSx SINE Alu 1 164 -148 192 298 0 18 chr17 28244884 28244941 -61259612 + L2 LINE L2 3214 3269 -3 2358 92 0 16 chr17 28245084 28245388 -61259165 + AluSg SINE Alu 1 299 -11 318 267 57 80 chr17 28245481 28245657 -61258896 + MIR3 SINE MIR 33 204 -4 810 148 95 12 chr17 28245773 28245913 -61258640 - Tigger7 DNA MER2_type 0 2487 2323 2099 105 46 26 chr17 28245913 28246219 -61258334 + AluSx SINE Alu 1 312 0 810 148 95 12 chr17 28246219 28246269 -61258284 - Tigger7 DNA MER2_type -164 2323 2279 1518 108 27 5 chr17 28246409 28246631 -61257922 + AluSg/x SINE Alu 69 295 -17 370 257 162 7 chr17 28246771 28246907 -61257646 - Zaphod DNA AcHobo -3773 258 102 2049 120 7 3 chr17 28247155 28247447 -61257106 - AluSx SINE Alu -19 293 1 21 57 0 0 chr17 28247450 28247485 -61257068 + AT_rich Low_complexity Low_complexity 1 35 0 306 73 0 0 chr17 28247713 28247754 -61256799 + (CA)n Simple_repeat Simple_repeat 2 42 0 1199 163 5 18 chr17 28247989 28248210 -61256343 - AluSg/x SINE Alu -7 303 86 1757 115 0 0 chr17 28248160 28248394 -61256159 - AluSq SINE Alu -10 303 70 1702 164 42 7 chr17 28249175 28249461 -61255092 - AluJb SINE Alu -16 296 1 410 41 0 0 chr17 28250789 28250838 -61253715 + MADE1 DNA Mariner 31 79 -1 2188 125 0 13 chr17 28251375 28251678 -61252875 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 28251976 28252004 -61252549 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr17 28252062 28252098 -61252455 + AT_rich Low_complexity Low_complexity 1 36 0 978 203 0 0 chr17 28252110 28252292 -61252261 + AluJo SINE Alu 123 304 -8 367 302 31 19 chr17 28252292 28252451 -61252102 + L1M4 LINE L1 4461 4621 -1525 1006 258 64 20 chr17 28252623 28253015 -61251538 - LTR16A LTR ERVL -26 424 16 758 161 0 31 chr17 28253182 28253312 -61251241 - FLAM_C SINE Alu -16 127 2 204 135 27 81 chr17 28253396 28253470 -61251083 + T-rich Low_complexity Low_complexity 5 74 0 23 0 0 0 chr17 28253832 28253855 -61250698 + AT_rich Low_complexity Low_complexity 1 23 0 2219 112 0 0 chr17 28254077 28254396 -61250157 - AluSx SINE Alu 0 319 1 26 0 0 0 chr17 28254779 28254805 -61249748 + AT_rich Low_complexity Low_complexity 1 26 0 1130 174 0 19 chr17 28254943 28255156 -61249397 - MER3 DNA MER1_type 0 209 1 1700 152 4 4 chr17 28255177 28255440 -61249113 + AluSx SINE Alu 45 307 -5 545 279 75 15 chr17 28255904 28256105 -61248448 + MLT1L LTR MaLR 403 615 0 277 248 0 0 chr17 28256596 28256664 -61247889 - L1MD2 LINE L1 -83 6274 6092 249 220 0 0 chr17 28256670 28256720 -61247833 - L1MD2 LINE L1 -242 6117 6068 732 173 7 0 chr17 28256721 28256860 -61247693 + L1 LINE L1 4453 4592 -1554 1347 102 0 0 chr17 28256881 28257058 -61247495 - AluSg/x SINE Alu -16 294 118 18118 56 6 0 chr17 28257061 28260109 -61244444 - L1PA6 LINE L1 -6 6148 3089 1144 93 7 7 chr17 28260212 28260363 -61244190 - AluSq/x SINE Alu -162 151 1 1425 82 115 10 chr17 28260530 28260738 -61243815 - MER30 DNA MER1_type 0 230 1 1815 158 28 3 chr17 28261122 28261413 -61243140 + AluSx SINE Alu 1 298 -14 2246 96 6 13 chr17 28262579 28262891 -61241662 + AluSg SINE Alu 1 310 0 1887 152 0 4 chr17 28262975 28263252 -61241301 - AluSx SINE Alu -36 276 1 21 0 0 0 chr17 28264089 28264110 -61240443 + AT_rich Low_complexity Low_complexity 1 21 0 1890 101 0 35 chr17 28264489 28264747 -61239806 - AluSx SINE Alu -15 297 49 1830 112 35 54 chr17 28265597 28265911 -61238642 + AluSx SINE Alu 1 308 -4 1675 181 0 20 chr17 28266397 28266701 -61237852 + AluJo SINE Alu 5 302 -10 2252 103 7 0 chr17 28267664 28267955 -61236598 + AluSc SINE Alu 1 293 -16 198 143 0 0 chr17 28269573 28269608 -61234945 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 235 196 39 0 chr17 28270661 28270712 -61233841 + MER58 DNA MER1_type 2358 2410 -10 1872 136 7 14 chr17 28270713 28270999 -61233554 + AluSx SINE Alu 1 284 -28 1762 160 0 42 chr17 28271390 28271696 -61232857 - AluJb SINE Alu -5 307 15 200 86 29 0 chr17 28273072 28273107 -61231446 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 201 39 0 0 chr17 28273374 28273400 -61231153 + (CAA)n Simple_repeat Simple_repeat 2 27 0 956 74 0 8 chr17 28273402 28273524 -61231029 + AluSq/x SINE Alu 1 121 -192 2230 118 0 0 chr17 28273694 28273998 -61230555 - AluSx SINE Alu -8 304 1 251 206 15 29 chr17 28274868 28274936 -61229617 - L3 LINE CR1 -3 1574 1508 2019 119 36 16 chr17 28274953 28275256 -61229297 + AluSx SINE Alu 1 309 -3 960 171 11 45 chr17 28275263 28275439 -61229114 + AluSg/x SINE Alu 133 302 -8 310 250 0 0 chr17 28275997 28276057 -61228496 + L2 LINE L2 3209 3268 -4 717 275 142 19 chr17 28276231 28276605 -61227948 - L3 LINE CR1 -206 1371 952 1780 163 3 3 chr17 28276605 28276887 -61227666 - AluJb SINE Alu -19 293 12 1075 152 101 135 chr17 28277085 28277249 -61227304 - AluJo SINE Alu -15 287 136 2287 72 7 42 chr17 28277249 28277555 -61226998 - AluSg SINE Alu -14 296 2 1075 152 101 135 chr17 28277555 28277686 -61226867 - AluJo SINE Alu -166 136 2 2302 80 0 52 chr17 28277976 28278300 -61226253 - AluSx SINE Alu -5 307 1 1387 185 49 4 chr17 28278387 28278652 -61225901 + AluJo SINE Alu 18 294 -18 2175 113 0 10 chr17 28278657 28278966 -61225587 + AluSx SINE Alu 1 306 -6 201 138 0 0 chr17 28279869 28279898 -61224655 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2121 71 19 0 chr17 28279995 28280262 -61224291 + AluSp SINE Alu 3 274 -39 461 149 11 21 chr17 28280368 28280462 -61224091 + AluSp/q SINE Alu 216 308 -5 2269 87 13 10 chr17 28283054 28283363 -61221190 - AluSx SINE Alu -2 310 1 208 135 0 0 chr17 28283485 28283522 -61221031 + (T)n Simple_repeat Simple_repeat 1 37 0 2397 90 13 0 chr17 28283841 28284142 -61220411 - AluSx SINE Alu -7 305 1 327 179 2 0 chr17 28284540 28284607 -61219946 - Alu SINE Alu 0 300 243 356 313 138 45 chr17 28284836 28284986 -61219567 + L2 LINE L2 2113 2248 -1066 2240 124 0 0 chr17 28284986 28285284 -61219269 - AluSx SINE Alu -14 298 1 356 313 138 45 chr17 28285284 28285581 -61218972 + L2 LINE L2 2248 2602 -712 235 200 31 15 chr17 28285589 28285654 -61218899 - L1ME4a LINE L1 -80 6041 5976 498 230 196 0 chr17 28285681 28285829 -61218724 + MIR SINE MIR 86 262 0 1770 187 0 16 chr17 28285952 28286262 -61218291 + AluJb SINE Alu 1 305 -7 1847 114 70 92 chr17 28286465 28286598 -61217955 + MER46B DNA MER2_type 1 135 -2596 1224 193 60 14 chr17 28286598 28286883 -61217670 + AluSx SINE Alu 1 298 -14 1847 114 70 92 chr17 28286883 28286938 -61217615 + MER46B DNA MER2_type 135 56 -2675 2168 95 32 0 chr17 28286938 28287222 -61217331 + AluSg SINE Alu 1 293 -17 1847 114 70 92 chr17 28287222 28287401 -61217152 + MER46B DNA MER2_type 55 236 0 907 122 32 0 chr17 28287716 28287839 -61216714 + AluSq/x SINE Alu 9 135 -178 2051 138 0 7 chr17 28287839 28288137 -61216416 + AluSx SINE Alu 1 296 -16 1977 123 58 3 chr17 28288532 28288824 -61215729 + AluSg SINE Alu 2 309 -1 2200 133 0 3 chr17 28289009 28289318 -61215235 + AluSx SINE Alu 1 308 -4 1226 199 7 29 chr17 28290290 28290566 -61213987 - AluJo SINE Alu -42 270 1 435 276 8 0 chr17 28290566 28290700 -61213853 - L1M4 LINE L1 -3198 2948 2814 231 36 0 0 chr17 28290730 28290758 -61213795 + (TA)n Simple_repeat Simple_repeat 2 29 0 1943 127 3 17 chr17 28290758 28290911 -61213642 - AluSx SINE Alu -25 287 138 2347 85 0 0 chr17 28290911 28291206 -61213347 - AluSc SINE Alu -14 295 1 1943 127 3 17 chr17 28291206 28291343 -61213210 - AluSx SINE Alu -174 138 1 1951 128 0 20 chr17 28291417 28291714 -61212839 + AluSx SINE Alu 1 291 -21 183 42 0 0 chr17 28291825 28291849 -61212704 + (CCA)n Simple_repeat Simple_repeat 1 24 0 1632 178 89 7 chr17 28291852 28292156 -61212397 + MLT1A1 LTR MaLR 37 365 0 1675 176 24 3 chr17 28292185 28292475 -61212078 - AluJo SINE Alu -16 296 1 1013 156 11 34 chr17 28293706 28293885 -61210668 + AluJ SINE Alu 1 175 -137 2041 194 61 25 chr17 28293886 28294329 -61210224 - LTR2B LTR ERV1 0 490 32 782 158 8 0 chr17 28294344 28294471 -61210082 + AluJ SINE Alu 169 296 -16 316 77 0 0 chr17 28294599 28294651 -61209902 - L1MA2 LINE L1 -1 6303 6252 1968 166 0 6 chr17 28295089 28295402 -61209151 - AluJb SINE Alu -1 311 1 1034 206 55 0 chr17 28295952 28296170 -61208383 - MIR SINE MIR -4 258 29 1864 175 0 3 chr17 28296183 28296492 -61208061 + AluJb SINE Alu 1 308 -4 262 256 35 12 chr17 28296492 28296578 -61207975 + MIR SINE MIR 45 132 -130 223 175 0 0 chr17 28297244 28297284 -61207269 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 286 285 154 39 chr17 28297286 28297416 -61207137 - L2 LINE L2 0 3272 3128 476 184 127 15 chr17 28297533 28297711 -61206842 + MIR SINE MIR 43 239 -23 195 286 36 60 chr17 28298007 28298091 -61206462 - MIR SINE MIR -97 111 30 2268 116 10 0 chr17 28298929 28299230 -61205323 + AluSx SINE Alu 1 304 -8 318 222 22 0 chr17 28299251 28299341 -61205212 - MER113 DNA MER1_type? -429 92 1 853 220 30 30 chr17 28299907 28300107 -61204446 - MIR SINE MIR -55 207 8 189 194 16 113 chr17 28300133 28300195 -61204358 - L2 LINE L2 -14 3258 3203 2204 128 3 3 chr17 28300360 28300666 -61203887 + AluSx SINE Alu 1 306 -6 1773 155 3 29 chr17 28301536 28301846 -61202707 + AluJb SINE Alu 1 302 -10 2292 109 3 0 chr17 28301851 28302153 -61202400 + AluSg SINE Alu 5 307 -3 313 269 26 26 chr17 28303098 28303176 -61201377 - L1MC4 LINE L1 -1340 6702 6625 308 305 114 0 chr17 28303104 28303209 -61201344 + L1MCa LINE L1 1996 2112 -4314 * 2351 97 3 0 chr17 28303219 28303518 -61201035 - AluSp SINE Alu -13 300 1 3027 111 73 52 chr17 28303538 28303693 -61200860 - MER4B LTR ERV1 0 610 460 2420 112 0 0 chr17 28303693 28304006 -61200547 - AluSp SINE Alu 0 313 1 3027 111 73 52 chr17 28304006 28304408 -61200145 - MER4B LTR ERV1 -150 460 41 187 278 97 0 chr17 28304665 28304737 -61199816 + MIR SINE MIR 61 139 -69 1955 148 0 0 chr17 28304954 28305232 -61199321 + AluSx SINE Alu 35 312 0 392 338 56 81 chr17 28306634 28306860 -61197693 - L1M4 LINE L1 -772 5374 5165 1994 140 3 10 chr17 28306860 28307174 -61197379 - AluJo SINE Alu 0 312 1 392 338 56 81 chr17 28307174 28307414 -61197139 - L1M4 LINE L1 -981 5165 4920 1956 131 7 3 chr17 28307440 28307744 -61196809 - AluSx SINE Alu 0 305 1 26 30 0 0 chr17 28308015 28308048 -61196505 + AT_rich Low_complexity Low_complexity 1 33 0 879 158 0 0 chr17 28308048 28308175 -61196378 - FLAM_C SINE Alu -16 127 1 219 88 0 0 chr17 28308179 28308213 -61196340 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 610 13 0 0 chr17 28308215 28308292 -61196261 - L1PA3 LINE L1 0 6155 6079 475 270 56 43 chr17 28308298 28308531 -61196022 - L1ME LINE L1 -512 5609 5374 1787 139 0 96 chr17 28308697 28308953 -61195600 - AluJo SINE Alu -1 311 95 2090 136 7 3 chr17 28308953 28309255 -61195298 - AluSx SINE Alu -9 303 1 1787 139 0 96 chr17 28309255 28309342 -61195211 - AluJo SINE Alu -217 95 1 298 220 92 28 chr17 28309533 28309642 -61194911 - LTR33 LTR ERVL -52 469 354 501 277 71 34 chr17 28309682 28309920 -61194633 - LTR33 LTR ERVL -274 247 1 1806 151 11 0 chr17 28310079 28310384 -61194169 + AluJo SINE Alu 1 308 0 1763 177 37 0 chr17 28311315 28311615 -61192938 + AluSx SINE Alu 1 311 -1 663 138 11 0 chr17 28311843 28311937 -61192616 + AluSq/x SINE Alu 33 127 -186 723 148 87 46 chr17 28312047 28312243 -61192310 - LTR36 LTR ERV1 -407 204 1 521 267 47 37 chr17 28312398 28312589 -61191964 + MIR SINE MIR 66 258 -4 253 328 35 52 chr17 28312644 28312760 -61191793 + MIR SINE MIR 117 230 -32 268 297 36 103 chr17 28312836 28313031 -61191522 + MIR3 SINE MIR 13 194 -14 522 177 7 14 chr17 28313055 28313182 -61191371 + (CA)n Simple_repeat Simple_repeat 2 129 -12 3172 146 155 29 chr17 28313182 28313684 -61190869 - LTR8A LTR ERV1 0 727 124 1730 157 14 7 chr17 28313684 28314008 -61190545 + AluSx SINE Alu 1 326 0 3172 146 155 29 chr17 28314008 28314150 -61190403 - LTR8A LTR ERV1 -603 124 1 522 177 7 14 chr17 28314150 28314163 -61190390 + (CA)n Simple_repeat Simple_repeat 129 141 0 1732 151 56 0 chr17 28314850 28315135 -61189418 - AluSx SINE Alu -11 301 1 373 212 8 85 chr17 28315664 28315707 -61188846 - MIR SINE MIR -59 203 158 2498 78 3 0 chr17 28315707 28316013 -61188540 - AluSp SINE Alu -1 312 6 373 212 8 85 chr17 28316013 28316087 -61188466 - MIR SINE MIR -104 158 95 240 111 0 0 chr17 28316176 28316212 -61188341 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 468 165 220 9 chr17 28316212 28316321 -61188232 - FLAM_C SINE Alu -1 132 1 1190 183 0 25 chr17 28316967 28317169 -61187384 + AluJo SINE Alu 86 282 -30 337 231 111 9 chr17 28317733 28317841 -61186712 + LTR67 LTR ERVL 428 546 -11 1546 163 13 59 chr17 28317843 28318150 -61186403 + AluJo SINE Alu 1 293 -19 192 232 188 43 chr17 28318224 28318293 -61186260 - L2 LINE L2 -12 3260 3182 679 213 65 24 chr17 28318436 28318574 -61185979 + L2 LINE L2 2639 2787 -527 2878 169 18 84 chr17 28318574 28319201 -61185352 - LTR9 LTR ERV1 0 612 28 2136 93 66 0 chr17 28319201 28319490 -61185063 - AluSc SINE Alu -1 308 1 2878 169 18 84 chr17 28319490 28319517 -61185036 - LTR9 LTR ERV1 -584 28 1 679 213 65 24 chr17 28319517 28319547 -61185006 + L2 LINE L2 2787 2814 -500 274 215 43 21 chr17 28319550 28319643 -61184910 + MLT1J LTR MaLR 100 194 -317 1829 165 28 0 chr17 28320248 28320533 -61184020 + AluJb SINE Alu 1 293 -19 2298 87 0 14 chr17 28320642 28320978 -61183575 + AluSx SINE Alu 1 332 0 422 321 87 35 chr17 28320986 28321550 -61183003 + L1ME3A LINE L1 4614 5206 -940 578 244 63 25 chr17 28321594 28321832 -61182721 + L1ME3A LINE L1 5313 5562 -600 230 221 39 26 chr17 28321838 28321915 -61182638 + MER46C DNA MER2_type 10 87 -251 461 17 17 0 chr17 28321915 28321973 -61182580 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1866 101 67 0 chr17 28321973 28322241 -61182312 - AluSx SINE Alu -26 286 1 231 256 26 0 chr17 28322273 28322351 -61182202 + (CGG)n Simple_repeat Simple_repeat 2 81 0 619 229 32 6 chr17 28322869 28323138 -61181415 + MER52A LTR ERV1 149 597 -681 510 281 133 12 chr17 28323156 28323238 -61181315 + L1ME3A LINE L1 5565 5636 -534 1974 138 3 14 chr17 28323238 28323535 -61181018 + AluJb SINE Alu 1 294 -18 510 281 133 12 chr17 28323535 28323776 -61180777 + L1ME3A LINE L1 5636 5927 -243 1273 152 0 0 chr17 28323810 28323988 -61180565 + AluSx SINE Alu 24 201 -111 240 235 20 31 chr17 28324005 28324103 -61180450 + (TA)n Simple_repeat Simple_repeat 2 98 0 237 241 36 12 chr17 28324213 28324296 -61180257 + L1MC4 LINE L1 7918 8002 -40 225 0 0 0 chr17 28324302 28324327 -61180226 + (TTATA)n Simple_repeat Simple_repeat 4 28 0 2032 129 0 27 chr17 28324327 28324621 -61179932 - AluSx SINE Alu -26 286 1 782 196 79 8 chr17 28324621 28324840 -61179713 + MSTC LTR MaLR 168 428 0 854 123 14 14 chr17 28324840 28324986 -61179567 - L1M3 LINE L1 -593 5578 5433 969 182 30 10 chr17 28325859 28326147 -61178406 - L1M3 LINE L1 -742 5441 5155 191 313 0 83 chr17 28326147 28326243 -61178310 - L2 LINE L2 -266 3006 2919 221 234 31 47 chr17 28326387 28326451 -61178102 + MER5A DNA MER1_type 12 74 -115 770 150 0 0 chr17 28326463 28326576 -61177977 + FLAM_C SINE Alu 13 125 -18 416 289 8 8 chr17 28326586 28326707 -61177846 + MER5A DNA MER1_type 61 181 -8 252 306 0 14 chr17 28327914 28327986 -61176567 + MIR SINE MIR 191 261 -1 479 261 109 7 chr17 28327995 28328133 -61176420 + MIR SINE MIR 95 246 -16 1517 195 0 43 chr17 28328178 28328501 -61176052 - AluJb SINE Alu -3 309 1 373 200 7 89 chr17 28328518 28328653 -61175900 - L1MA8 LINE L1 0 6291 6168 357 230 14 14 chr17 28328660 28328734 -61175819 + L2 LINE L2 3180 3253 -19 579 66 0 0 chr17 28328734 28328810 -61175743 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 1252 130 0 21 chr17 28329200 28329392 -61175161 - AluSg/x SINE Alu -5 305 118 589 141 0 0 chr17 28329523 28329615 -61174938 - FLAM_C SINE Alu -24 119 28 456 308 73 13 chr17 28329615 28329849 -61174704 + L2 LINE L2 2885 3132 -181 2305 121 0 0 chr17 28329945 28330252 -61174301 - AluSg SINE Alu -3 307 1 411 289 60 118 chr17 28330499 28330848 -61173705 + L2 LINE L2 2944 3272 0 1986 162 0 3 chr17 28330849 28331158 -61173395 + AluJb SINE Alu 1 308 -4 1705 235 60 72 chr17 28331434 28331670 -61172883 - L1ME3A LINE L1 -23 6147 5910 2217 106 0 41 chr17 28331670 28331990 -61172563 - AluSx SINE Alu -5 307 1 1686 162 67 3 chr17 28331993 28332277 -61172276 - AluJo SINE Alu -10 302 1 1705 235 60 72 chr17 28332277 28332699 -61171854 - L1ME3A LINE L1 -262 5908 5493 1807 167 3 23 chr17 28332882 28333187 -61171366 - AluJo SINE Alu -9 303 5 1308 204 0 22 chr17 28333436 28333750 -61170803 + L1M4 LINE L1 4984 5290 -856 416 100 11 144 chr17 28333750 28333840 -61170713 + MADE1 DNA Mariner 2 79 -1 523 195 62 9 chr17 28333887 28334000 -61170553 + MLT1C LTR MaLR 349 467 0 282 87 0 0 chr17 28334051 28334097 -61170456 + (TG)n Simple_repeat Simple_repeat 2 47 0 1854 137 56 3 chr17 28334202 28334487 -61170066 + AluJo SINE Alu 2 301 -11 317 301 147 47 chr17 28334920 28335322 -61169231 + L2 LINE L2 2815 3256 -16 2022 144 3 0 chr17 28335340 28335645 -61168908 - AluJb SINE Alu -6 306 1 329 260 202 0 chr17 28335816 28335920 -61168633 - L2 LINE L2 0 3272 3148 742 279 75 47 chr17 28335972 28336374 -61168179 - MLT1K LTR MaLR 0 588 176 243 0 45 45 chr17 28336526 28336570 -61167983 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1259 50 0 13 chr17 28336570 28336729 -61167824 - L1PA4 LINE L1 -11 6144 5988 370 284 50 14 chr17 28336732 28336873 -61167680 - MIR3 SINE MIR -60 148 3 1940 156 16 10 chr17 28336941 28337248 -61167305 - AluSx SINE Alu -2 310 2 684 36 0 0 chr17 28337870 28337953 -61166600 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1713 144 0 0 chr17 28337955 28338198 -61166355 - AluJb SINE Alu -28 284 42 808 184 41 10 chr17 28338237 28338433 -61166120 + MLT1C LTR MaLR 1 202 -265 1080 230 26 15 chr17 28338518 28338783 -61165770 + MLT1C LTR MaLR 200 467 0 2173 140 0 0 chr17 28338874 28339182 -61165371 - AluSx SINE Alu -4 308 1 2032 166 0 0 chr17 28339185 28339486 -61165067 - AluJb SINE Alu -11 301 1 447 323 105 4 chr17 28339603 28339832 -61164721 + L3 LINE CR1 1231 1482 -95 260 304 0 0 chr17 28339876 28339932 -61164621 - MIR SINE MIR -190 72 17 181 287 0 64 chr17 28339937 28340031 -61164522 + MIR3 SINE MIR 118 205 -3 607 227 0 0 chr17 28340288 28340398 -61164155 + MER81 DNA DNA 5 114 0 477 309 82 66 chr17 28341141 28341357 -61163196 + L2 LINE L2 2813 3024 -248 2077 127 148 13 chr17 28341357 28341734 -61162819 - MSTA LTR MaLR 0 428 1 477 309 82 66 chr17 28341734 28341970 -61162583 + L2 LINE L2 3024 3272 0 362 218 208 0 chr17 28342610 28342711 -61161842 - L1MDa LINE L1 -4089 1991 1870 1334 149 7 117 chr17 28342714 28342996 -61161557 + AluJb SINE Alu 37 287 -25 2294 104 10 0 chr17 28343148 28343447 -61161106 - AluSp SINE Alu -5 308 7 689 173 8 31 chr17 28343453 28343580 -61160973 - FLAM_C SINE Alu -8 125 2 1387 149 0 0 chr17 28343666 28343861 -61160692 - AluJb SINE Alu 0 312 118 885 254 67 40 chr17 28343863 28344268 -61160285 - L1MDa LINE L1 -4517 1744 1329 357 24 0 0 chr17 28344270 28344312 -61160241 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 1651 112 5 0 chr17 28344341 28344555 -61159998 - AluSx SINE Alu -97 215 1 1147 159 0 0 chr17 28344576 28344752 -61159801 - AluSg/x SINE Alu 0 312 137 727 154 0 60 chr17 28344827 28344976 -61159577 - FLAM_C SINE Alu -1 142 3 741 188 14 158 chr17 28344990 28345452 -61159101 - L1MDa LINE L1 -4879 1201 813 1574 120 0 0 chr17 28345452 28345660 -61158893 + AluSg/x SINE Alu 83 290 -20 741 188 14 158 chr17 28345660 28345692 -61158861 - L1MDa LINE L1 -5267 813 778 1348 211 56 83 chr17 28345707 28345764 -61158789 - L1M4 LINE L1 -978 5168 5111 1846 164 4 4 chr17 28345764 28346065 -61158488 - AluSx SINE Alu 0 301 1 1348 211 56 83 chr17 28346065 28346144 -61158409 - L1M4 LINE L1 -1035 5111 5031 2308 120 48 31 chr17 28346144 28346502 -61158051 + THE1B LTR MaLR 1 364 0 11827 89 17 3 chr17 28346502 28348060 -61156493 + THE1B-int LTR MaLR 1 1580 0 2058 124 75 29 chr17 28348060 28348408 -61156145 + THE1B LTR MaLR 1 364 0 1348 211 56 83 chr17 28348408 28348746 -61155807 - L1M4 LINE L1 -1112 5034 4703 762 249 31 0 chr17 28348759 28348984 -61155569 - L1MDa LINE L1 -2629 3451 3220 3101 176 30 66 chr17 28348985 28349346 -61155207 + MER44D DNA MER2_type 1 373 -2214 3981 115 37 94 chr17 28349346 28349398 -61155155 + LTR8 LTR ERV1 1 54 -637 2172 129 0 0 chr17 28349398 28349693 -61154860 + AluSx SINE Alu 1 295 -17 3981 115 37 94 chr17 28349693 28350131 -61154422 + LTR8 LTR ERV1 54 438 -253 1978 166 0 3 chr17 28350131 28350439 -61154114 - AluJb SINE Alu -5 307 1 3981 115 37 94 chr17 28350439 28350680 -61153873 + LTR8 LTR ERV1 438 691 0 3101 176 30 66 chr17 28350680 28351049 -61153504 + MER44D DNA MER2_type 373 705 0 1672 231 26 0 chr17 28351049 28351374 -61153179 - L1MDa LINE L1 -2860 3220 2876 1823 163 3 19 chr17 28351374 28351687 -61152866 - AluJo SINE Alu -4 308 1 1672 231 26 0 chr17 28351687 28351854 -61152699 - L1MDa LINE L1 -3204 2876 2715 1564 242 82 50 chr17 28351865 28352447 -61152106 - L1MDa LINE L1 -5441 629 29 241 299 39 0 chr17 28352471 28352548 -61152005 - MIR SINE MIR -136 126 47 741 278 99 9 chr17 28352734 28352957 -61151596 + MIR SINE MIR 8 250 -12 190 258 211 31 chr17 28353122 28353250 -61151303 - MIR3 SINE MIR -18 190 40 356 274 20 0 chr17 28353838 28353940 -61150613 - MIR SINE MIR -101 161 58 279 275 184 0 chr17 28354096 28354205 -61150348 - L2 LINE L2 0 3272 3144 1677 171 10 17 chr17 28354817 28355115 -61149438 + AluJb SINE Alu 1 296 -16 647 225 39 16 chr17 28355316 28355510 -61149043 - MIR SINE MIR -28 234 34 190 318 48 0 chr17 28356375 28356438 -61148115 - MIR SINE MIR -3 259 194 2531 83 3 0 chr17 28356485 28356797 -61147756 - AluSp SINE Alu 0 313 1 2007 161 0 13 chr17 28356797 28357108 -61147445 - AluSx SINE Alu -5 307 1 234 150 0 0 chr17 28357166 28357206 -61147347 + (CAT)n Simple_repeat Simple_repeat 2 41 0 532 289 27 7 chr17 28357222 28357371 -61147182 - MIR SINE MIR -32 230 79 244 316 11 32 chr17 28357993 28358088 -61146465 + MIR3 SINE MIR 81 173 -35 315 272 25 0 chr17 28358370 28358451 -61146102 - MLT1K LTR MaLR -8 580 498 263 313 82 8 chr17 28358575 28358709 -61145844 + MLT1J LTR MaLR 156 299 -212 512 291 46 35 chr17 28358871 28359132 -61145421 - MLT1K LTR MaLR -201 387 124 182 387 68 21 chr17 28359569 28359760 -61144793 + MIR SINE MIR 61 260 -2 233 164 213 0 chr17 28360231 28360292 -61144261 + MIR SINE MIR 16 89 -173 1793 164 11 4 chr17 28360301 28360606 -61143947 - AluJo SINE Alu 0 307 1 34 0 0 0 chr17 28360618 28360652 -61143901 + AT_rich Low_complexity Low_complexity 1 34 0 2173 127 0 32 chr17 28360665 28360980 -61143573 - AluSx SINE Alu -7 305 1 1669 168 18 55 chr17 28360998 28361117 -61143436 + L1MB8 LINE L1 5812 5934 -244 2570 75 0 0 chr17 28361117 28361425 -61143128 + AluY SINE Alu 1 308 -3 1669 168 18 55 chr17 28361425 28361686 -61142867 + L1MB8 LINE L1 5934 6178 0 311 244 87 26 chr17 28362173 28362288 -61142265 + MIR SINE MIR 24 145 -63 189 138 0 0 chr17 28362412 28362441 -61142112 - L3 LINE CR1 -127 1450 1422 203 105 53 0 chr17 28362490 28362528 -61142025 + CT-rich Low_complexity Low_complexity 1 40 0 2114 160 0 0 chr17 28362528 28362835 -61141718 - AluSx SINE Alu -5 307 1 262 344 39 0 chr17 28362842 28362970 -61141583 - L3 LINE CR1 -162 1415 1283 21 0 0 0 chr17 28364386 28364407 -61140146 + AT_rich Low_complexity Low_complexity 1 21 0 931 261 165 20 chr17 28364851 28365261 -61139292 - L2 LINE L2 -48 3265 2791 855 145 14 29 chr17 28365379 28365517 -61139036 - AluJo SINE Alu -176 136 1 934 196 23 56 chr17 28365528 28365790 -61138763 - L1ME2 LINE L1 -81 6083 5874 6738 131 38 11 chr17 28365822 28368114 -61136439 - L1MA3 LINE L1 0 7724 5367 627 115 35 26 chr17 28368108 28368221 -61136332 - L1MA3 LINE L1 -7436 129 16 * 383 236 9 19 chr17 28368220 28368326 -61136227 - L1ME2 LINE L1 -271 5895 5791 * 1433 210 39 45 chr17 28368330 28368851 -61135702 - L1ME2 LINE L1 -662 5502 4981 1659 173 35 11 chr17 28368851 28369135 -61135418 + AluJo SINE Alu 1 291 -21 1433 210 39 45 chr17 28369135 28369195 -61135358 - L1ME2 LINE L1 -1183 4981 4922 1442 167 103 55 chr17 28369596 28369944 -61134609 + MLT1A1 LTR MaLR 1 365 0 362 316 36 24 chr17 28370098 28370266 -61134287 - MIR SINE MIR -37 225 56 328 320 72 20 chr17 28370827 28370980 -61133573 + L2 LINE L2 3111 3271 -1 1987 114 60 20 chr17 28370980 28371279 -61133274 + AluSp SINE Alu 1 311 -2 562 237 25 0 chr17 28371393 28371530 -61133023 + MIR SINE MIR 115 252 -10 304 279 36 57 chr17 28371991 28372131 -61132422 - L1ME LINE L1 -386 5735 5599 276 313 45 0 chr17 28372295 28372407 -61132146 + MLT1K LTR MaLR 132 248 -340 22 0 0 0 chr17 28372418 28372440 -61132113 + AT_rich Low_complexity Low_complexity 1 22 0 763 208 61 15 chr17 28372484 28372681 -61131872 - L1MC4 LINE L1 -143 7899 7694 644 190 58 29 chr17 28372698 28372835 -61131718 - AluJo SINE Alu -66 246 106 1446 231 60 8 chr17 28372836 28373219 -61131334 - L1MC4 LINE L1 -380 7662 7300 2043 145 7 0 chr17 28373219 28373516 -61131037 - AluJb SINE Alu -13 299 1 1446 231 60 8 chr17 28373516 28373861 -61130692 - L1MC4 LINE L1 -742 7300 6751 207 0 0 0 chr17 28373868 28373891 -61130662 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 526 313 111 12 chr17 28374050 28374293 -61130260 + MLT1K LTR MaLR 322 588 0 1550 161 24 24 chr17 28374726 28374981 -61129572 + AluJo SINE Alu 1 255 -57 297 179 21 11 chr17 28375235 28375330 -61129223 + (CA)n Simple_repeat Simple_repeat 2 97 0 1854 178 0 0 chr17 28375402 28375739 -61128814 - AluJo SINE Alu 0 337 1 605 178 8 11 chr17 28375800 28376042 -61128511 + AluJ SINE Alu 1 312 0 1967 157 3 16 chr17 28376317 28376629 -61127924 - AluJb SINE Alu -4 308 1 289 238 12 25 chr17 28376898 28376978 -61127575 - MIR SINE MIR -167 95 17 1830 53 0 9 chr17 28377487 28377715 -61126838 + L1PA8 LINE L1 5947 6172 0 266 291 145 8 chr17 28377724 28377841 -61126712 + MIR SINE MIR 54 186 -76 203 286 0 20 chr17 28377952 28378001 -61126552 + L2 LINE L2 3211 3258 -14 2401 98 25 19 chr17 28378244 28378610 -61125943 - THE1C LTR MaLR 0 375 8 416 279 75 78 chr17 28378741 28378779 -61125774 - MLT1K LTR MaLR -40 548 511 2097 143 7 0 chr17 28378779 28379072 -61125481 + AluSx SINE Alu 1 295 -17 416 279 75 78 chr17 28379072 28379355 -61125198 - MLT1K LTR MaLR -77 511 228 2048 115 3 94 chr17 28379357 28379696 -61124857 - AluSx SINE Alu -4 308 1 1763 163 0 14 chr17 28379737 28380020 -61124533 + AluJo SINE Alu 14 292 -20 22 0 0 0 chr17 28380020 28380042 -61124511 + AT_rich Low_complexity Low_complexity 1 22 0 481 305 30 16 chr17 28380266 28380457 -61124096 + MIR SINE MIR 5 196 -62 382 132 26 0 chr17 28380824 28380900 -61123653 + CT-rich Low_complexity Low_complexity 4 81 0 659 311 74 55 chr17 28380920 28381422 -61123131 - L2 LINE L2 -13 3259 2754 357 261 119 8 chr17 28381930 28382064 -61122489 - L3 LINE CR1 -3 1574 1426 733 267 107 78 chr17 28382721 28383095 -61121458 - L2 LINE L2 -1 3271 2887 1236 137 0 11 chr17 28383506 28383689 -61120864 - AluSg/x SINE Alu -16 294 114 * 1342 148 51 34 chr17 28383688 28383925 -61120628 - AluSx SINE Alu -71 241 1 867 141 0 15 chr17 28383932 28384067 -61120486 - FLAM_C SINE Alu 0 133 1 773 187 80 0 chr17 28384128 28384278 -61120275 - AluJo/FRAM SINE Alu -16 296 135 750 109 0 0 chr17 28384268 28384369 -61120184 + AluSp/q SINE Alu 163 263 -50 * 1649 192 20 13 chr17 28384369 28384765 -61119788 + L1MB4 LINE L1 5681 6079 -101 22 0 0 0 chr17 28384813 28384835 -61119718 + AT_rich Low_complexity Low_complexity 1 22 0 1868 146 15 0 chr17 28385436 28385710 -61118843 + AluSx SINE Alu 1 278 -34 243 0 0 0 chr17 28385714 28385741 -61118812 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1897 131 45 0 chr17 28385745 28386036 -61118517 + AluSg SINE Alu 1 303 0 21 36 0 0 chr17 28386135 28386163 -61118390 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr17 28386352 28386383 -61118170 + (CA)n Simple_repeat Simple_repeat 2 32 0 238 212 248 66 chr17 28386456 28386593 -61117960 - MIR SINE MIR -57 205 44 197 264 132 0 chr17 28386598 28386651 -61117902 - MIR SINE MIR -187 75 16 517 196 116 9 chr17 28387692 28387804 -61116749 - FLAM_C SINE Alu -7 126 3 268 250 77 125 chr17 28387804 28388012 -61116541 + MIR SINE MIR 59 256 -6 1166 183 39 0 chr17 28388117 28388325 -61116228 - MER20 DNA MER1_type -3 216 1 268 303 67 25 chr17 28388486 28388605 -61115948 + L2 LINE L2 3190 3313 0 1614 148 110 23 chr17 28389032 28389377 -61115176 + THE1C LTR MaLR 1 375 0 183 80 0 0 chr17 28389728 28389753 -61114800 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1908 145 26 48 chr17 28389833 28389930 -61114623 + MER2 DNA MER2_type 1 99 -245 2294 113 3 0 chr17 28389930 28390232 -61114321 - AluSp SINE Alu -10 303 1 1908 145 26 48 chr17 28390232 28390486 -61114067 + MER2 DNA MER2_type 99 344 0 283 143 11 143 chr17 28391495 28391586 -61112967 - SN5 Other centromeric -77 378 300 884 291 43 15 chr17 28396338 28396858 -61107695 + L1MC3 LINE L1 5479 5956 -1829 246 99 37 37 chr17 28396970 28397051 -61107502 + A-rich Low_complexity Low_complexity 4 84 0 7110 41 2 0 chr17 28400349 28402006 -61102547 - L1PA5 LINE L1 0 6154 4495 568 304 105 22 chr17 28404103 28404504 -61100049 + ERVL LTR ERVL 4007 4440 -1324 351 184 112 61 chr17 28404957 28405024 -61099529 - L1MD3 LINE L1 -74 7921 7846 1630 187 0 23 chr17 28405024 28405334 -61099219 + AluJo SINE Alu 1 303 -9 351 184 112 61 chr17 28405334 28405364 -61099189 - L1MD3 LINE L1 -149 7846 7819 324 289 37 30 chr17 28405390 28405525 -61099028 - L1MC3 LINE L1 -154 7631 7496 905 196 58 0 chr17 28405525 28405714 -61098839 - Tigger3(Golem) DNA MER2_type -98 2931 2732 655 209 9 0 chr17 28405715 28405830 -61098723 + FLAM_C SINE Alu 2 117 -16 395 197 0 13 chr17 28405875 28405951 -61098602 - Tigger3(Golem) DNA MER2_type -2951 78 4 659 214 121 0 chr17 28405955 28406095 -61098458 - MER2 DNA MER2_type -188 157 1 1099 239 40 71 chr17 28406121 28406593 -61097960 - L1ME3A LINE L1 -161 6005 5537 605 238 21 0 chr17 28406639 28406782 -61097771 + MIR SINE MIR 47 192 -70 326 298 169 28 chr17 28407646 28407737 -61096816 + L1ME4a LINE L1 5878 5955 -166 2139 129 3 0 chr17 28407737 28408039 -61096514 + AluSx SINE Alu 1 303 -9 326 298 169 28 chr17 28408039 28408125 -61096428 + L1ME4a LINE L1 5955 6080 -41 704 321 64 19 chr17 28408357 28408718 -61095835 + LTR16A LTR ERVL 21 397 -53 255 288 147 31 chr17 28408741 28408932 -61095621 + L2 LINE L2 3100 3312 -1 2294 122 0 0 chr17 28409158 28409461 -61095092 + AluSg SINE Alu 1 303 -7 2309 113 3 0 chr17 28409543 28409844 -61094709 + AluSp SINE Alu 1 302 -11 1297 186 44 69 chr17 28409856 28410131 -61094422 + AluJo SINE Alu 1 268 -44 1867 183 3 0 chr17 28410200 28410506 -61094047 + AluJo SINE Alu 1 307 -5 422 288 95 41 chr17 28410605 28410931 -61093622 + L1MC/D LINE L1 5377 5727 -465 1290 153 9 52 chr17 28410934 28411163 -61093390 + AluJo SINE Alu 88 306 -6 1278 214 6 67 chr17 28411192 28411523 -61093030 + AluSx SINE Alu 1 311 -1 213 219 61 24 chr17 28412150 28412232 -61092321 + L2 LINE L2 2041 2125 -1189 1777 175 7 0 chr17 28412310 28412623 -61091930 + AluJb SINE Alu 1 315 0 561 289 77 66 chr17 28412665 28412971 -61091582 + L2 LINE L2 2131 2445 -869 1943 157 3 22 chr17 28412971 28413289 -61091264 - AluSx SINE Alu 0 312 1 561 289 77 66 chr17 28413289 28413435 -61091118 + L2 LINE L2 2445 2588 -726 643 215 15 0 chr17 28413437 28413572 -61090981 - MER89 LTR ERV1 0 559 423 1889 163 6 19 chr17 28413572 28413980 -61090573 - AluJb SINE Alu 0 404 1 2210 120 10 0 chr17 28414080 28414388 -61090165 - AluSp SINE Alu -2 311 1 2265 131 0 0 chr17 28414402 28414714 -61089839 - AluSx SINE Alu 0 312 1 382 151 0 0 chr17 28414716 28414789 -61089764 - L1M4 LINE L1 -946 5200 5128 1784 140 18 87 chr17 28414822 28414939 -61089614 + MER47A DNA MER2_type 1 124 -2199 2214 113 3 3 chr17 28414939 28415232 -61089321 + AluSp SINE Alu 3 295 -18 306 0 0 0 chr17 28415242 28415276 -61089277 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1491 117 17 35 chr17 28415276 28415507 -61089046 + AluY SINE Alu 85 311 0 1784 140 18 87 chr17 28415507 28415770 -61088783 + MER47A DNA MER2_type 131 366 0 689 281 215 7 chr17 28415789 28416194 -61088359 - L2 LINE L2 -773 2541 2053 381 248 64 64 chr17 28416195 28416352 -61088201 + MIR SINE MIR 101 257 -5 729 224 29 6 chr17 28416763 28416937 -61087616 - MER45A DNA AcHobo 0 178 1 1931 136 41 0 chr17 28417269 28417591 -61086962 - AluSq SINE Alu 0 335 2 1550 166 72 4 chr17 28417919 28418197 -61086356 - AluJb SINE Alu -15 297 1 2012 132 10 7 chr17 28418205 28418500 -61086053 - AluJb SINE Alu -14 298 3 181 291 13 25 chr17 28419133 28419212 -61085341 - L2 LINE L2 -181 3091 3014 313 331 93 0 chr17 28419297 28419448 -61085105 + L2 LINE L2 1545 1709 -1605 479 168 0 10 chr17 28419463 28419564 -61084989 + GA-rich Low_complexity Low_complexity 4 103 0 390 306 123 12 chr17 28420298 28420468 -61084085 - MIR SINE MIR -22 240 52 2158 134 3 10 chr17 28420778 28421091 -61083462 - AluJb SINE Alu -1 311 1 347 235 24 0 chr17 28421092 28421177 -61083376 - L2 LINE L2 -1515 1799 1713 626 296 141 30 chr17 28421180 28421647 -61082906 + LTR33 LTR ERVL 1 519 -2 287 48 0 24 chr17 28421653 28421695 -61082858 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 1219 290 94 52 chr17 28421698 28421747 -61082806 - L2 LINE L2 -1623 1691 1646 2098 146 10 7 chr17 28421747 28422049 -61082504 + AluSx SINE Alu 1 303 -9 1219 290 94 52 chr17 28422049 28422442 -61082111 - L2 LINE L2 -1668 1646 1201 2247 118 3 3 chr17 28422442 28422755 -61081798 - AluSq SINE Alu 0 313 1 1219 290 94 52 chr17 28422755 28423069 -61081484 - L2 LINE L2 -2113 1201 902 219 260 80 73 chr17 28423091 28423241 -61081312 - L2 LINE L2 -2719 595 445 435 130 0 26 chr17 28423615 28423692 -61080861 - AluJb SINE Alu -178 134 60 247 191 44 15 chr17 28423701 28423769 -61080784 - MIR SINE MIR -109 153 84 426 219 0 0 chr17 28424454 28424536 -61080017 + L2 LINE L2 3232 3313 0 333 355 53 0 chr17 28424839 28425067 -61079486 + L2 LINE L2 2467 2706 -608 403 216 39 0 chr17 28425159 28425261 -61079292 - MER5A DNA MER1_type -80 109 4 702 306 72 16 chr17 28425265 28425768 -61078785 + L2 LINE L2 2763 3302 -11 225 277 62 0 chr17 28426148 28426213 -61078340 - MIR SINE MIR -112 150 82 * 230 213 93 27 chr17 28426183 28426258 -61078295 - MIR SINE MIR -72 136 57 * 509 309 73 32 chr17 28426251 28426497 -61078056 + L2 LINE L2 3051 3306 -7 1693 168 44 7 chr17 28426539 28426837 -61077716 + AluJo SINE Alu 1 309 -3 1811 160 0 58 chr17 28427237 28427550 -61077003 + AluJo SINE Alu 1 295 -17 803 212 0 62 chr17 28427695 28427888 -61076665 + MER5A DNA MER1_type 7 187 -2 488 208 66 0 chr17 28428686 28428792 -61075761 - MLT1H1 LTR MaLR -438 117 5 467 264 42 14 chr17 28429185 28429244 -61075309 + MIR SINE MIR 101 157 -105 2393 93 7 0 chr17 28429244 28429554 -61074999 + AluSq SINE Alu 1 312 -1 467 264 42 14 chr17 28429554 28429638 -61074915 + MIR SINE MIR 157 248 -14 608 228 57 5 chr17 28429675 28429868 -61074685 + L1M4 LINE L1 4976 5178 -968 252 254 32 16 chr17 28430295 28430358 -61074195 - MIR SINE MIR -63 145 82 373 265 109 20 chr17 28430575 28430722 -61073831 - MIR3 SINE MIR -15 193 34 23 68 0 0 chr17 28432867 28432911 -61071642 + GC_rich Low_complexity Low_complexity 1 44 0 26 64 0 0 chr17 28433147 28433194 -61071359 + GC_rich Low_complexity Low_complexity 1 47 0 189 74 0 0 chr17 28433195 28433222 -61071331 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 476 284 135 10 chr17 28433722 28433930 -61070623 + MIR SINE MIR 29 262 0 970 296 149 8 chr17 28434353 28434748 -61069805 - MLT1J LTR MaLR -45 466 16 470 183 269 91 chr17 28435901 28435970 -61068583 + MIR SINE MIR 27 82 -180 417 244 122 33 chr17 28435970 28436150 -61068403 + MER91A DNA MER1_type 1 196 0 470 183 269 91 chr17 28436150 28436277 -61068276 + MIR SINE MIR 82 258 -4 537 183 0 0 chr17 28436741 28436845 -61067708 + T-rich Low_complexity Low_complexity 3 106 0 207 0 0 0 chr17 28436845 28436868 -61067685 + (TC)n Simple_repeat Simple_repeat 1 23 0 801 189 0 0 chr17 28438005 28438127 -61066426 + AluJb SINE Alu 157 278 -34 2187 94 39 0 chr17 28438155 28438441 -61066112 - AluSx SINE Alu -15 297 1 1488 129 0 9 chr17 28438809 28439034 -61065519 - AluSg/x SINE Alu -6 304 82 329 211 102 0 chr17 28439147 28439261 -61065292 - L1ME LINE L1 -385 5736 5604 185 302 16 0 chr17 28439527 28439590 -61064963 + L2 LINE L2 2991 3054 -218 193 322 99 33 chr17 28439706 28439827 -61064726 + L2 LINE L2 3185 3313 0 1862 149 0 0 chr17 28439994 28440263 -61064290 + AluJb SINE Alu 29 297 -15 354 327 58 27 chr17 28440463 28440720 -61063833 - L1ME4a LINE L1 -12 6109 5845 211 250 241 9 chr17 28441581 28441693 -61062860 + MIR SINE MIR 88 225 -37 356 236 123 9 chr17 28441784 28441890 -61062663 + MIR SINE MIR 20 137 -71 220 273 136 0 chr17 28442739 28442827 -61061726 + MIR SINE MIR 49 148 -114 664 242 65 16 chr17 28442899 28443085 -61061468 + MIR SINE MIR 3 197 -65 512 141 0 0 chr17 28443086 28443164 -61061389 + MER2 DNA MER2_type 1 78 -267 2386 101 0 0 chr17 28443189 28443485 -61061068 - AluSc SINE Alu -13 296 1 361 217 72 0 chr17 28443485 28443568 -61060985 + MER2 DNA MER2_type 257 345 0 205 256 0 0 chr17 28443568 28443607 -61060946 + MIR SINE MIR 197 235 -27 546 211 35 21 chr17 28444272 28444414 -61060139 - MIR SINE MIR -117 145 2 242 350 80 0 chr17 28445554 28445691 -61058862 - MIR SINE MIR -62 200 53 313 338 83 15 chr17 28447048 28447181 -61057372 + MIR SINE MIR 27 168 -94 226 286 143 0 chr17 28447241 28447311 -61057242 + L2 LINE L2 3169 3248 -24 325 319 133 57 chr17 28447758 28447968 -61056585 + L2 LINE L2 3005 3238 -34 791 153 0 36 chr17 28447968 28448105 -61056448 - FLAM_C SINE Alu -1 132 1 325 319 133 57 chr17 28448105 28448142 -61056411 + L2 LINE L2 3238 3271 -1 223 327 65 9 chr17 28449043 28449150 -61055403 + MIR SINE MIR 33 145 -63 404 268 79 24 chr17 28449298 28449462 -61055091 + MIR SINE MIR 70 242 -20 382 300 23 15 chr17 28450629 28450759 -61053794 + MIR SINE MIR 119 249 -13 220 211 99 0 chr17 28451695 28451766 -61052787 - MIR SINE MIR -70 192 115 198 329 117 22 chr17 28453893 28454030 -61050523 - L2 LINE L2 0 3272 3123 346 357 42 4 chr17 28455047 28455285 -61049268 - L1ME LINE L1 -391 5771 5525 187 147 29 0 chr17 28456180 28456214 -61048339 - MIR SINE MIR -9 253 219 1602 174 41 7 chr17 28456562 28456832 -61047721 + AluJb SINE Alu 1 279 -33 826 134 87 0 chr17 28456834 28456961 -61047592 + AluJo/FRAM SINE Alu 164 301 -11 196 297 40 27 chr17 28456978 28457052 -61047501 + MIR3 SINE MIR 120 194 -14 345 279 34 50 chr17 28457054 28457233 -61047320 - MER5B DNA MER1_type 0 178 3 23 0 0 0 chr17 28457734 28457757 -61046796 + AT_rich Low_complexity Low_complexity 1 23 0 319 291 46 33 chr17 28458091 28458242 -61046311 + MIR SINE MIR 76 228 -34 219 304 36 27 chr17 28460003 28460115 -61044438 + L2 LINE L2 2885 2997 -275 207 341 49 12 chr17 28460255 28460337 -61044216 + L2 LINE L2 3188 3272 0 1289 146 160 37 chr17 28460701 28460969 -61043584 + AluSx SINE Alu 2 302 0 2361 141 35 45 chr17 28460978 28461440 -61043113 - MER4D LTR ERV1 -291 612 156 892 92 23 0 chr17 28461432 28461562 -61042991 + MER4D LTR ERV1 743 875 -28 * 268 153 0 51 chr17 28461669 28461728 -61042825 + L1ME4a LINE L1 6059 6114 -7 201 196 43 0 chr17 28461741 28461787 -61042766 + GA-rich Low_complexity Low_complexity 1 48 0 486 206 169 12 chr17 28461987 28462147 -61042406 - MIR SINE MIR 0 262 78 180 0 0 0 chr17 28462663 28462683 -61041870 + (A)n Simple_repeat Simple_repeat 1 20 0 461 198 0 0 chr17 28462845 28462926 -61041627 - MER7A DNA MER2_type 0 346 266 * 698 199 106 0 chr17 28462925 28463076 -61041477 - MER7A DNA MER2_type -181 165 1 589 282 98 52 chr17 28463198 28463524 -61041029 + MLT1J LTR MaLR 12 352 -159 2331 124 0 3 chr17 28463604 28463918 -61040635 - AluSq SINE Alu 0 313 1 912 229 26 40 chr17 28464811 28464856 -61039697 + L1ME3A LINE L1 5665 5709 -461 860 154 0 0 chr17 28464856 28464986 -61039567 - FLAM_C SINE Alu -3 130 1 912 229 26 40 chr17 28464986 28465242 -61039311 + L1ME3A LINE L1 5709 5962 -208 517 238 49 24 chr17 28465323 28465487 -61039066 + L1ME3A LINE L1 5995 6162 -8 2295 101 7 7 chr17 28465558 28465854 -61038699 - AluSx SINE Alu -16 296 1 248 262 5 108 chr17 28467644 28467759 -61036794 - MIR SINE MIR -43 165 57 344 273 30 45 chr17 28467863 28467995 -61036558 - MIR SINE MIR -48 214 85 1647 163 0 98 chr17 28468431 28468707 -61035846 - AluJo SINE Alu -6 306 67 2493 71 3 0 chr17 28468707 28469004 -61035549 + AluY SINE Alu 2 299 -12 1647 163 0 98 chr17 28469004 28469064 -61035489 - AluJo SINE Alu -245 67 3 2209 113 0 3 chr17 28469264 28469589 -61034964 + AluSx SINE Alu 1 324 0 181 328 31 0 chr17 28469686 28469750 -61034803 - MIR3 SINE MIR -53 155 90 372 350 84 9 chr17 28469767 28469993 -61034560 + MIR SINE MIR 20 262 0 1869 108 8 0 chr17 28470420 28470661 -61033892 + AluSp SINE Alu 1 243 -70 891 217 14 47 chr17 28471707 28471919 -61032634 - MIR SINE MIR -27 235 31 199 240 0 20 chr17 28472487 28472537 -61032016 - MIR SINE MIR -112 150 102 1103 275 52 8 chr17 28473471 28473856 -61030697 - MLT1I LTR MaLR -3 406 5 530 108 0 0 chr17 28473938 28474012 -61030541 - AluS SINE Alu -229 84 11 1148 163 23 32 chr17 28474022 28474243 -61030310 - MER20 DNA MER1_type 0 219 1 431 270 26 9 chr17 28474343 28474458 -61030095 + MIR SINE MIR 121 237 -25 236 356 30 45 chr17 28475026 28475158 -61029395 - L3 LINE CR1 -9 1568 1439 291 294 20 10 chr17 28475217 28475319 -61029234 + MIR SINE MIR 10 112 -150 1436 92 0 0 chr17 28475640 28475814 -61028739 + AluSx SINE Alu 1 174 -138 1263 176 0 30 chr17 28475815 28476048 -61028505 - THE1-int LTR MaLR -833 747 522 422 78 324 10 chr17 28476049 28476151 -61028402 + AluSc SINE Alu 176 309 0 183 80 0 0 chr17 28476160 28476185 -61028368 + (A)n Simple_repeat Simple_repeat 1 25 0 215 300 0 0 chr17 28476260 28476320 -61028233 + MIR SINE MIR 159 218 -44 208 238 0 0 chr17 28476414 28476456 -61028097 + L2 LINE L2 3255 3296 -17 207 366 171 5 chr17 28476864 28477080 -61027473 - L3 LINE CR1 -476 1101 850 289 361 8 23 chr17 28477889 28478019 -61026534 - L3 LINE CR1 -1284 293 166 527 215 58 35 chr17 28478604 28478776 -61025777 + MER5B DNA MER1_type 1 176 -2 181 243 114 29 chr17 28478859 28478929 -61025624 + MER5A DNA MER1_type 114 189 0 2354 87 0 26 chr17 28479081 28479391 -61025162 - AluSx SINE Alu -10 302 1 702 276 158 11 chr17 28479694 28480049 -61024504 + MER113 DNA MER1_type? 60 466 -55 212 222 74 0 chr17 28481832 28481886 -61022667 - L3 LINE CR1 -7 1570 1513 536 249 75 55 chr17 28484152 28484353 -61020200 + MIR SINE MIR 56 260 -2 264 236 195 0 chr17 28484524 28484647 -61019906 - MIR SINE MIR -4 258 112 353 343 6 41 chr17 28484818 28484987 -61019566 - MIR3 SINE MIR -11 197 35 1545 173 3 71 chr17 28485949 28486086 -61018467 + AluJo SINE Alu 1 146 -166 432 0 0 0 chr17 28486086 28486134 -61018419 + (CA)n Simple_repeat Simple_repeat 2 49 0 1545 173 3 71 chr17 28486134 28486320 -61018233 + AluJo SINE Alu 146 302 -10 198 143 0 0 chr17 28486331 28486366 -61018187 + (TG)n Simple_repeat Simple_repeat 2 36 0 343 286 131 40 chr17 28486522 28486697 -61017856 - L1MC/D LINE L1 -2030 5778 5588 242 283 120 36 chr17 28487089 28487285 -61017268 - MIR SINE MIR -1 261 20 207 176 0 0 chr17 28487322 28487356 -61017197 + (CA)n Simple_repeat Simple_repeat 1 34 0 208 326 0 22 chr17 28487814 28487906 -61016647 + GA-rich Low_complexity Low_complexity 2 91 0 2464 73 0 0 chr17 28488380 28488667 -61015886 - AluSc SINE Alu -22 287 1 656 164 49 8 chr17 28488673 28488795 -61015758 - FLAM_C SINE Alu -16 127 1 431 185 7 89 chr17 28488851 28488986 -61015567 + L1ME3A LINE L1 5697 5820 -1988 345 273 151 7 chr17 28489067 28489206 -61015347 + L1ME3A LINE L1 6010 6168 -2 1671 194 24 21 chr17 28489314 28489650 -61014903 + MSTB LTR MaLR 1 337 -89 298 165 25 51 chr17 28489613 28489692 -61014861 + AluS SINE Alu 223 299 -2 * 320 24 71 0 chr17 28489706 28489748 -61014805 + MSTB1 LTR MaLR 323 367 -65 969 110 0 22 chr17 28489748 28489884 -61014669 - FLAM_C SINE Alu -10 133 1 2321 96 0 3 chr17 28489896 28490198 -61014355 - AluSx SINE Alu -11 301 1 393 167 0 0 chr17 28490198 28490270 -61014283 + MSTB1 LTR MaLR 361 432 0 383 312 7 28 chr17 28490413 28490554 -61013999 - MIR3 SINE MIR -56 152 15 400 317 107 53 chr17 28491372 28491615 -61012938 - MIR SINE MIR -3 259 4 279 230 140 17 chr17 28492243 28492377 -61012176 + MIR SINE MIR 3 150 -58 257 351 0 0 chr17 28492749 28492823 -61011730 + L2 LINE L2 3238 3311 -2 1984 134 38 3 chr17 28492829 28493119 -61011434 + AluSx SINE Alu 1 300 -12 328 248 41 21 chr17 28493487 28493632 -61010921 - LTR16A LTR ERVL -287 163 16 2442 80 17 0 chr17 28493744 28494045 -61010508 - AluSp SINE Alu -7 306 1 410 285 118 106 chr17 28494459 28494873 -61009680 - L1ME4a LINE L1 -65 6056 5638 23 33 0 0 chr17 28495071 28495101 -61009452 + AT_rich Low_complexity Low_complexity 1 30 0 714 142 0 0 chr17 28495101 28495207 -61009346 - FLAM_C SINE Alu -36 107 2 1129 102 6 11 chr17 28495493 28495669 -61008884 + L1PB3 LINE L1 5965 6139 -15 276 290 109 65 chr17 28495950 28496088 -61008465 - MIR3 SINE MIR -13 195 52 320 204 114 125 chr17 28496598 28496666 -61007887 - L2 LINE L2 -1 3312 3245 1855 135 51 4 chr17 28496666 28496940 -61007613 + AluSx SINE Alu 1 287 -25 222 37 0 0 chr17 28496943 28496970 -61007583 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 320 204 114 125 chr17 28496970 28497073 -61007480 - L2 LINE L2 -70 3243 3139 252 235 86 12 chr17 28497243 28497324 -61007229 - L2 LINE L2 -531 2783 2697 246 182 0 99 chr17 28498087 28498208 -61006345 + GA-rich Low_complexity Low_complexity 2 110 0 407 188 0 104 chr17 28498232 28498424 -61006129 + GA-rich Low_complexity Low_complexity 3 174 0 276 202 225 0 chr17 28498498 28498587 -61005966 - MIR SINE MIR -63 145 37 210 250 120 43 chr17 28498780 28498872 -61005681 - MIR SINE MIR 0 262 164 434 272 22 72 chr17 28498905 28499085 -61005468 - MIR SINE MIR -76 186 16 262 274 36 12 chr17 28499184 28499268 -61005285 - L2 LINE L2 -18 3254 3169 2013 152 0 16 chr17 28499333 28499642 -61004911 + AluJo SINE Alu 1 304 -8 299 254 130 22 chr17 28499809 28499947 -61004606 + MIR3 SINE MIR 2 154 -54 4007 95 2 0 chr17 28499980 28500529 -61004024 + MER41A LTR ERV1 1 550 -4 264 280 64 32 chr17 28501171 28501296 -61003257 + L2 LINE L2 3143 3271 -1 318 316 81 14 chr17 28502222 28502431 -61002122 + L2 LINE L2 2953 3175 -138 593 157 20 10 chr17 28502435 28502537 -61002016 - FLAM_A SINE Alu -21 121 19 463 310 0 32 chr17 28502538 28502696 -61001857 + L2 LINE L2 3161 3313 0 23 0 0 0 chr17 28502698 28502721 -61001832 + AT_rich Low_complexity Low_complexity 1 23 0 588 266 111 10 chr17 28502721 28502928 -61001625 - MIR SINE MIR -25 237 10 687 169 81 27 chr17 28504279 28504427 -61000126 + AluJb SINE Alu 133 288 -24 2285 101 20 0 chr17 28504527 28504824 -60999729 - AluSx SINE Alu -9 303 1 898 240 141 42 chr17 28505739 28506173 -60998380 + L2 LINE L2 2818 3294 -19 1963 129 20 10 chr17 28506186 28506480 -60998073 + AluSx SINE Alu 1 297 -15 2084 137 0 36 chr17 28506675 28506811 -60997742 + AluSx SINE Alu 1 140 -172 2529 84 0 0 chr17 28506811 28507121 -60997432 + AluSg SINE Alu 1 310 0 2084 137 0 36 chr17 28507121 28507290 -60997263 + AluSx SINE Alu 140 295 -17 491 271 43 56 chr17 28507292 28507315 -60997238 + L1ME4a LINE L1 5567 5589 -532 378 0 0 0 chr17 28507315 28507357 -60997196 + (CA)n Simple_repeat Simple_repeat 2 43 0 491 271 43 56 chr17 28507357 28507641 -60996912 + L1ME4a LINE L1 5589 5881 -240 561 296 74 0 chr17 28507663 28507866 -60996687 - MIR SINE MIR -17 245 28 2058 140 24 0 chr17 28508822 28509115 -60995438 + AluSx SINE Alu 1 300 -12 291 261 17 52 chr17 28509115 28509230 -60995323 + L1MC5 LINE L1 7821 7931 -30 2402 70 0 22 chr17 28509234 28509548 -60995005 + AluY SINE Alu 1 307 -4 230 313 21 21 chr17 28509569 28509665 -60994888 + MER34 LTR ERV1 1 96 -446 764 180 0 30 chr17 28509670 28509837 -60994716 + LTR29 LTR ERV1 137 298 -324 528 253 60 24 chr17 28509838 28510004 -60994549 + LTR48B LTR ERV1 473 644 0 873 206 41 32 chr17 28510166 28510385 -60994168 + MIR SINE MIR 41 261 -1 213 39 0 0 chr17 28510881 28510907 -60993646 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr17 28511809 28511835 -60992718 + AT_rich Low_complexity Low_complexity 1 26 0 705 157 0 0 chr17 28511837 28511952 -60992601 - FLAM_C SINE Alu -18 115 1 1275 102 0 31 chr17 28512315 28512511 -60992042 - MER30B DNA MER1_type 0 190 1 663 185 96 0 chr17 28512618 28512764 -60991789 - AluJb SINE Alu -3 309 150 385 275 9 18 chr17 28513353 28513462 -60991091 + MIR3 SINE MIR 95 202 -6 1538 128 163 4 chr17 28513852 28514110 -60990443 - AluJb SINE Alu -13 299 1 560 273 195 5 chr17 28514247 28514628 -60989925 + L1ME4a LINE L1 5599 6102 -19 298 335 204 11 chr17 28515029 28515220 -60989333 + MIR SINE MIR 17 244 -18 2110 141 3 0 chr17 28515966 28516265 -60988288 + AluSx SINE Alu 11 310 -2 814 92 8 25 chr17 28518170 28518290 -60986263 + FLAM_C SINE Alu 26 143 0 225 171 0 0 chr17 28518555 28518590 -60985963 - Alu SINE Alu -235 68 34 1882 151 14 0 chr17 28518590 28518875 -60985678 + AluSx SINE Alu 13 301 -11 1179 165 0 100 chr17 28518887 28519148 -60985405 - MER46A DNA MER2_type 0 236 2 362 192 0 26 chr17 28519892 28519970 -60984583 - MIR SINE MIR -151 111 36 1448 160 0 0 chr17 28520075 28520287 -60984266 - AluJb SINE Alu -17 295 84 594 326 19 30 chr17 28520992 28521256 -60983297 - MIR SINE MIR -1 261 1 201 225 0 0 chr17 28521288 28521328 -60983225 + (CAGC)n Simple_repeat Simple_repeat 1 40 0 377 235 29 67 chr17 28521605 28521725 -60982828 + MER33 DNA MER1_type 1 86 -97 367 315 172 19 chr17 28521759 28522348 -60982205 + L2 LINE L2 2512 3251 -62 289 316 71 6 chr17 28522928 28523096 -60981457 - MIR SINE MIR -71 191 13 211 279 0 16 chr17 28523133 28523194 -60981359 + MIR SINE MIR 90 149 -113 858 101 78 0 chr17 28524216 28524345 -60980208 + MER85 DNA T2_type 1 139 0 3156 108 75 4 chr17 28524359 28524851 -60979702 + MER1A DNA MER1_type 1 527 0 1508 188 20 32 chr17 28524870 28525215 -60979338 - L1MD3 LINE L1 0 7995 7655 1466 183 30 55 chr17 28525258 28525541 -60979012 - L1MC3 LINE L1 -643 7142 6870 216 0 0 0 chr17 28525541 28525565 -60978988 + (TG)n Simple_repeat Simple_repeat 2 25 0 1466 183 30 55 chr17 28525565 28525679 -60978874 - L1MC3 LINE L1 -915 6870 6755 603 166 93 14 chr17 28525719 28525858 -60978695 - L1MB3 LINE L1 -1 6182 6033 1947 138 6 29 chr17 28526237 28526549 -60978004 - AluJo SINE Alu -7 305 1 408 264 57 0 chr17 28527599 28527705 -60976848 + MIR3 SINE MIR 67 178 -30 190 279 33 16 chr17 28528580 28528641 -60975912 + L2 LINE L2 3211 3272 0 552 263 46 0 chr17 28529429 28529604 -60974949 + MER3 DNA MER1_type 25 207 -2 194 242 0 48 chr17 28529764 28529826 -60974727 - L2 LINE L2 -329 2984 2926 256 319 0 0 chr17 28531622 28531691 -60972862 - L2 LINE L2 0 3313 3245 209 33 33 0 chr17 28531863 28531893 -60972660 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2088 122 0 0 chr17 28531895 28532173 -60972380 - AluSx SINE Alu -34 278 1 327 216 216 0 chr17 28532233 28532335 -60972218 + L2 LINE L2 3190 3313 0 271 250 0 0 chr17 28532909 28532973 -60971580 + MIR SINE MIR 57 120 -142 437 361 89 7 chr17 28532985 28533265 -60971288 + L2 LINE L2 2432 2734 -580 186 21 64 85 chr17 28533272 28533319 -60971234 + (TTTCC)n Simple_repeat Simple_repeat 5 50 0 1417 178 35 8 chr17 28533326 28533584 -60970969 - AluJo SINE Alu -47 265 1 388 311 143 32 chr17 28533596 28533990 -60970563 + L2 LINE L2 2732 3179 -134 2404 100 3 6 chr17 28534010 28534321 -60970232 - AluSq SINE Alu -3 310 1 343 277 12 0 chr17 28534682 28534765 -60969788 - MLT1K LTR MaLR -324 264 181 331 226 36 109 chr17 28535112 28535249 -60969304 - L1ME4a LINE L1 -23 6098 5972 288 295 23 39 chr17 28535317 28535446 -60969107 - MIR SINE MIR -14 248 122 1728 186 7 7 chr17 28535459 28535754 -60968799 - AluJo SINE Alu -17 295 1 368 241 168 7 chr17 28535787 28535924 -60968629 - L1ME4a LINE L1 -7 6114 5956 301 314 16 33 chr17 28536992 28537113 -60967440 + MIR SINE MIR 11 129 -133 672 145 8 40 chr17 28537343 28537467 -60967086 + FLAM_C SINE Alu 5 124 -19 213 196 59 0 chr17 28537889 28537940 -60966613 + MIR3 SINE MIR 124 177 -31 1424 227 34 3 chr17 28539537 28539858 -60964695 + MER58B DNA MER1_type 3 333 -8 270 295 266 0 chr17 28540335 28540474 -60964079 + MIR SINE MIR 81 256 -6 422 278 9 35 chr17 28540870 28540985 -60963568 - MER5B DNA MER1_type -66 112 1 314 260 0 0 chr17 28540991 28541064 -60963489 - MIR3 SINE MIR -49 159 87 243 308 177 0 chr17 28543174 28543304 -60961249 + Charlie8 DNA MER1_type 19 171 -2246 1196 134 106 0 chr17 28543420 28543637 -60960916 + MER57A LTR ERV1 1 240 -163 205 355 9 45 chr17 28544934 28545044 -60959509 + L2 LINE L2 3080 3185 -87 3832 148 10 2 chr17 28545079 28545711 -60958842 - MER41B LTR ERV1 0 624 1 1521 237 144 5 chr17 28545826 28546248 -60958305 - MLT1E2 LTR MaLR -8 618 138 1683 129 25 53 chr17 28546266 28546584 -60957969 - Tigger7 DNA MER2_type -1 2486 2178 1375 173 4 43 chr17 28546587 28546841 -60957712 - Tigger7 DNA MER2_type -458 275 32 274 186 34 0 chr17 28546949 28547008 -60957545 + MIR SINE MIR 85 145 -117 310 227 89 0 chr17 28548538 28548656 -60955897 - MIR SINE MIR -61 147 40 189 344 44 0 chr17 28548957 28549047 -60955506 - MIR SINE MIR -149 113 20 835 229 36 0 chr17 28549350 28549542 -60955011 + MIR SINE MIR 44 242 -20 2001 160 3 6 chr17 28549626 28549939 -60954614 + AluSx SINE Alu 1 312 0 272 292 10 20 chr17 28550614 28550729 -60953824 + MIR SINE MIR 44 155 -60 257 153 17 68 chr17 28550773 28550832 -60953721 - MSTA LTR MaLR 0 428 373 1448 112 0 0 chr17 28550848 28551045 -60953508 - AluSg SINE Alu -58 252 56 1653 135 102 27 chr17 28551047 28551380 -60953173 - MSTA LTR MaLR -41 387 30 315 288 103 84 chr17 28551380 28551843 -60952710 + L2 LINE L2 2778 3247 -25 194 310 42 0 chr17 28552179 28552236 -60952317 + MIR SINE MIR 89 151 -111 1353 188 31 0 chr17 28552236 28552465 -60952088 - MER46A DNA MER2_type 0 236 1 194 310 42 0 chr17 28552465 28552478 -60952075 + MIR SINE MIR 151 162 -100 612 271 134 20 chr17 28553368 28553615 -60950938 - MLT1I LTR MaLR -1 408 134 291 56 0 0 chr17 28554234 28554270 -60950283 - U2 snRNA snRNA -152 36 1 2091 124 3 0 chr17 28554974 28555272 -60949281 - AluSx SINE Alu -13 299 1 340 313 102 6 chr17 28555297 28555463 -60949090 + MIR SINE MIR 45 226 -36 2200 118 0 0 chr17 28556905 28557209 -60947344 - AluSx SINE Alu -8 304 1 307 287 11 11 chr17 28558914 28559001 -60945552 - MER5A DNA MER1_type -5 184 98 261 264 22 33 chr17 28559284 28559375 -60945178 - MIR SINE MIR -165 97 8 327 329 42 36 chr17 28559432 28559599 -60944954 + MIR SINE MIR 30 197 -65 1085 267 59 30 chr17 28560035 28560603 -60943950 - L1MC4a LINE L1 0 6162 5574 325 355 35 12 chr17 28561055 28561224 -60943329 - L2 LINE L2 -213 3059 2887 264 224 34 56 chr17 28561469 28561576 -60942977 + MIR SINE MIR 43 147 -81 248 285 179 8 chr17 28562881 28563004 -60941549 - MIR SINE MIR -6 256 113 1660 229 40 6 chr17 28563771 28564124 -60940429 - MLT1A1 LTR MaLR 0 365 1 387 285 66 0 chr17 28564134 28564271 -60940282 + MIR SINE MIR 47 192 -70 189 313 157 0 chr17 28564912 28564995 -60939558 - MIR SINE MIR -86 176 81 261 188 0 31 chr17 28565147 28565211 -60939342 - MER103 DNA DNA -97 69 8 511 336 67 5 chr17 28565387 28565610 -60938943 - MIR SINE MIR -6 256 20 678 277 173 9 chr17 28566028 28566346 -60938207 + MER113 DNA MER1_type? 1 370 -151 229 329 13 13 chr17 28566734 28566810 -60937743 + L2 LINE L2 3167 3242 -30 200 326 161 22 chr17 28566846 28567119 -60937434 - L2 LINE L2 -21 3292 2982 397 282 92 8 chr17 28567615 28567746 -60936807 - MIR SINE MIR -83 179 38 191 333 15 0 chr17 28567963 28568029 -60936524 - MIR SINE MIR -90 172 106 5898 158 76 38 chr17 28569027 28569312 -60935241 - Tigger3b DNA MER2_type -1798 1230 957 2073 119 3 0 chr17 28569312 28569597 -60934956 + AluSx SINE Alu 1 286 -26 5898 158 76 38 chr17 28569597 28570189 -60934364 - Tigger3b DNA MER2_type -2071 957 294 2193 108 0 19 chr17 28570189 28570504 -60934049 + AluSx SINE Alu 1 309 -3 5898 158 76 38 chr17 28570504 28570810 -60933743 - Tigger3b DNA MER2_type -2734 294 1 333 246 99 24 chr17 28570810 28570949 -60933604 - MIR SINE MIR -48 160 9 261 313 232 0 chr17 28571642 28571754 -60932799 - MIR3 SINE MIR -26 182 45 289 216 0 0 chr17 28573178 28573229 -60931324 + MER81 DNA DNA 39 89 -25 386 309 81 36 chr17 28574218 28574441 -60930112 - MIR SINE MIR -20 242 10 195 207 155 0 chr17 28574947 28575005 -60929548 + MER5B DNA MER1_type 112 178 0 349 270 111 0 chr17 28575239 28575365 -60929188 - MIR3 SINE MIR -30 178 39 1734 118 26 22 chr17 28576040 28576311 -60928242 + AluJo SINE Alu 6 277 -35 683 246 12 36 chr17 28576605 28576772 -60927781 + MER63 DNA MER1_type 1 789 -47 2002 121 0 0 chr17 28576888 28577169 -60927384 - AluSx SINE Alu -31 281 1 473 218 78 14 chr17 28578309 28578451 -60926102 + MIR SINE MIR 52 202 -60 426 340 13 19 chr17 28578581 28578740 -60925813 - MIR3 SINE MIR -39 169 12 612 252 64 41 chr17 28578969 28579187 -60925366 + MIR SINE MIR 7 229 -33 275 390 68 10 chr17 28580323 28580528 -60924025 + MIR SINE MIR 12 228 -34 1323 152 55 82 chr17 28580639 28580967 -60923586 - MER33 DNA MER1_type -2 322 4 217 283 329 0 chr17 28581128 28581280 -60923273 - MIR SINE MIR -14 248 47 2204 161 76 24 chr17 28582206 28582627 -60921926 - MER65A LTR ERV1 0 445 3 2760 114 58 5 chr17 28583329 28583741 -60920812 - MER61C LTR ERV1 0 434 1 1922 132 14 10 chr17 28583845 28584140 -60920413 - AluSx SINE Alu -15 297 2 350 283 75 68 chr17 28584146 28584411 -60920142 - L1ME4a LINE L1 -188 5933 5667 464 268 6 93 chr17 28584571 28584754 -60919799 - MER5B DNA MER1_type -8 170 4 1210 297 80 43 chr17 28585693 28586511 -60918042 - HAL1 LINE L1 -655 1852 1005 2117 118 0 13 chr17 28587562 28587867 -60916686 - AluSq SINE Alu -12 301 1 203 228 79 89 chr17 28588402 28588503 -60916050 + MIR3 SINE MIR 61 160 -48 236 214 71 0 chr17 28588506 28588576 -60915977 - MER58C DNA MER1_type -3 212 138 476 242 27 40 chr17 28588602 28588751 -60915802 - MER58C DNA MER1_type -55 160 140 352 289 0 0 chr17 28588812 28588903 -60915650 + MER58C DNA MER1_type 18 85 -130 913 121 23 0 chr17 28588903 28589035 -60915518 - AluJo SINE Alu -177 135 1 376 241 147 0 chr17 28589275 28589391 -60915162 - MER58C DNA MER1_type -14 201 69 2296 99 3 0 chr17 28589433 28589736 -60914817 - AluSx SINE Alu -8 304 1 1954 113 48 3 chr17 28589744 28590037 -60914516 - AluSg SINE Alu -4 306 1 293 256 11 22 chr17 28590460 28590550 -60914003 + L2 LINE L2 3184 3272 0 251 273 26 0 chr17 28590861 28590938 -60913615 - MIR3 SINE MIR -37 171 93 352 298 8 48 chr17 28592836 28592960 -60911593 + MER5A DNA MER1_type 63 181 -8 244 409 35 0 chr17 28595413 28595528 -60909025 - L2 LINE L2 -9 3263 3145 367 159 72 0 chr17 28596221 28596290 -60908263 + AluSp/q SINE Alu 219 292 -11 23 33 0 0 chr17 28596343 28596373 -60908180 + AT_rich Low_complexity Low_complexity 1 30 0 327 187 30 15 chr17 28597010 28597144 -60907409 + CT-rich Low_complexity Low_complexity 2 137 0 490 286 88 12 chr17 28598383 28598554 -60905999 - MIR SINE MIR -50 212 29 219 222 0 0 chr17 28598581 28598626 -60905927 - L2 LINE L2 -14 3258 3214 378 290 56 0 chr17 28598629 28598736 -60905817 + L1 LINE L1 2703 2815 -3331 1251 139 14 42 chr17 28598736 28598952 -60905601 + MER1B DNA MER1_type 130 339 0 663 323 16 0 chr17 28599411 28599603 -60904950 - MIR SINE MIR -28 234 40 1377 162 128 42 chr17 28599616 28599951 -60904602 - L1M3 LINE L1 -388 5795 5426 1111 279 159 7 chr17 28600369 28600415 -60904138 - L1ME3 LINE L1 -3 6159 6121 1837 148 7 13 chr17 28600415 28600719 -60903834 - AluJo SINE Alu -10 302 1 1111 279 159 7 chr17 28600719 28601170 -60903383 - L1ME3 LINE L1 -41 6121 5563 1778 169 0 25 chr17 28601170 28601490 -60903063 - AluJb SINE Alu 0 312 1 1111 279 159 7 chr17 28601490 28601558 -60902995 - L1ME3 LINE L1 -599 5563 5507 333 228 76 0 chr17 28602303 28602382 -60902171 + MIR3 SINE MIR 70 154 -54 216 0 0 0 chr17 28603097 28603121 -60901432 + (TCCTG)n Simple_repeat Simple_repeat 5 28 0 534 286 164 9 chr17 28603205 28603425 -60901128 + MIR SINE MIR 9 262 0 229 267 114 19 chr17 28603590 28603695 -60900858 - MIR SINE MIR -89 173 59 574 204 24 15 chr17 28604678 28604809 -60899744 + MIR SINE MIR 9 152 -56 262 129 77 0 chr17 28604895 28604955 -60899598 - MLT1D LTR MaLR -49 456 356 411 250 73 22 chr17 28605369 28605505 -60899048 - MIR SINE MIR -72 190 48 1517 177 83 83 chr17 28605636 28605823 -60898730 - MLT1D LTR MaLR -49 456 270 1839 169 0 10 chr17 28605823 28606136 -60898417 + AluJb SINE Alu 1 310 -2 1517 177 83 83 chr17 28606136 28606384 -60898169 - MLT1D LTR MaLR -234 271 21 300 318 19 9 chr17 28606393 28606500 -60898053 - L1MC4a LINE L1 -1786 6022 5915 425 214 11 112 chr17 28606501 28606688 -60897865 - L1MC4a LINE L1 -1954 5854 5687 1276 193 58 29 chr17 28606725 28607046 -60897507 + AluJo SINE Alu 1 329 0 247 345 24 0 chr17 28607503 28607587 -60896966 - MIR SINE MIR -130 132 47 463 237 74 33 chr17 28607818 28608033 -60896520 - L1MC5 LINE L1 -37 7924 7701 1796 173 0 10 chr17 28608040 28608329 -60896224 - AluJb SINE Alu -26 286 1 605 252 47 68 chr17 28608369 28608603 -60895950 + MER102b DNA MER1_type 106 334 -7 604 285 77 14 chr17 28608801 28609008 -60895545 - MIR SINE MIR -11 251 32 229 328 46 8 chr17 28609596 28609727 -60894826 + L2 LINE L2 3132 3267 -46 210 150 0 0 chr17 28610880 28610920 -60893633 + (CCCCCT)n Simple_repeat Simple_repeat 2 41 0 1453 153 12 20 chr17 28611134 28611293 -60893260 - AluJo SINE Alu -18 294 136 2083 114 0 3 chr17 28611293 28611592 -60892961 - AluSc SINE Alu -11 298 1 1453 153 12 20 chr17 28611592 28611686 -60892867 - AluJo SINE Alu -176 136 43 465 295 46 31 chr17 28611700 28611961 -60892592 - Tigger8 DNA MER2_type -186 480 216 2420 96 60 8 chr17 28612882 28613246 -60891307 + L1PA11 LINE L1 5782 6164 -10 1465 95 0 0 chr17 28613264 28613454 -60891099 + AluSq SINE Alu 17 206 -107 330 107 0 0 chr17 28613454 28613510 -60891043 + AluSq SINE Alu 242 297 -4 21 0 0 0 chr17 28613520 28613541 -60891012 + AT_rich Low_complexity Low_complexity 1 21 0 602 264 51 17 chr17 28614198 28614376 -60890177 + MIR SINE MIR 20 203 -59 320 228 51 146 chr17 28614376 28614478 -60890075 + Charlie8 DNA MER1_type 1 111 -219 668 238 0 0 chr17 28614478 28614600 -60889953 + FLAM_A SINE Alu 1 122 -11 320 228 51 146 chr17 28614600 28614751 -60889802 + Charlie8 DNA MER1_type 111 230 -100 361 292 87 104 chr17 28615680 28616046 -60888507 + L2 LINE L2 2906 3265 -7 246 315 24 15 chr17 28616331 28616449 -60888104 + MIR SINE MIR 15 132 -76 279 294 138 0 chr17 28619156 28619265 -60885288 - MIR SINE MIR -95 167 44 481 344 35 22 chr17 28619282 28619509 -60885044 - L2 LINE L2 -1 3312 3083 431 317 90 24 chr17 28619562 28619729 -60884824 + MER5B DNA MER1_type 1 178 0 298 278 72 0 chr17 28619729 28619826 -60884727 - L2 LINE L2 -504 2810 2707 697 278 28 0 chr17 28619830 28620006 -60884547 + MIR SINE MIR 79 259 -3 202 236 180 34 chr17 28620020 28620109 -60884444 - L2 LINE L2 -608 2706 2605 243 61 0 0 chr17 28620298 28620331 -60884222 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 353 266 59 53 chr17 28621704 28621873 -60882680 + MER5A DNA MER1_type 14 183 -6 2046 127 0 34 chr17 28621876 28622200 -60882353 + AluSq SINE Alu 1 313 0 496 276 6 26 chr17 28623855 28624011 -60880542 - MER103 DNA DNA -12 154 2 752 250 211 28 chr17 28624069 28624429 -60880124 + L2 LINE L2 2888 3313 0 260 257 40 0 chr17 28625483 28625557 -60878996 - L2 LINE L2 -60 3212 3136 211 259 94 0 chr17 28626011 28626096 -60878457 + MIR SINE MIR 58 150 -58 526 276 52 6 chr17 28626476 28626650 -60877903 - MIR SINE MIR -70 192 11 344 331 65 7 chr17 28627648 28627802 -60876751 - MIR3 SINE MIR -26 182 20 342 307 98 49 chr17 28628350 28628594 -60875959 + L2 LINE L2 3052 3307 -6 312 318 290 0 chr17 28628738 28628914 -60875639 + MIR SINE MIR 6 232 -30 180 111 0 0 chr17 28629353 28629380 -60875173 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 303 241 72 0 chr17 28629390 28629473 -60875080 - L2 LINE L2 -35 3237 3149 437 294 160 16 chr17 28629546 28629740 -60874813 + MIR SINE MIR 15 236 -26 423 321 101 41 chr17 28630872 28631066 -60873487 + MIR SINE MIR 2 212 -50 2080 111 10 0 chr17 28631066 28631354 -60873199 + AluSg SINE Alu 1 291 -19 423 321 101 41 chr17 28631354 28631377 -60873176 + MIR SINE MIR 212 232 -30 1957 124 17 17 chr17 28631483 28631782 -60872771 - AluSx SINE Alu -13 299 1 2264 102 0 0 chr17 28632252 28632557 -60871996 + AluSx SINE Alu 1 305 -7 277 374 144 0 chr17 28633903 28634042 -60870511 + MIR SINE MIR 95 253 -9 1679 189 3 7 chr17 28634607 28634914 -60869639 - AluJo SINE Alu -6 306 1 799 236 116 70 chr17 28636537 28636977 -60867576 - MER113 DNA MER1_type? -42 479 20 301 344 0 41 chr17 28637358 28637480 -60867073 + L2 LINE L2 2458 2574 -740 206 392 12 48 chr17 28637806 28637972 -60866581 + MIR SINE MIR 66 225 -37 * 219 402 10 0 chr17 28637949 28638046 -60866507 + L2 LINE L2 3200 3297 -16 1140 294 36 13 chr17 28640279 28640806 -60863747 - L1MD3 LINE L1 -1978 6017 5479 219 250 204 38 chr17 28645521 28645653 -60858900 + MIR SINE MIR 90 243 -19 343 230 14 93 chr17 28646262 28646401 -60858152 - L1 LINE L1 -2784 3362 3235 2076 157 21 3 chr17 28646710 28647048 -60857505 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 28647128 28647153 -60857400 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1670 138 110 51 chr17 28647495 28647849 -60856704 - THE1C LTR MaLR 0 375 1 2001 138 0 3 chr17 28648751 28649056 -60855497 + AluSc SINE Alu 1 304 -5 1543 195 19 7 chr17 28649440 28649747 -60854806 + AluSx SINE Alu 1 311 -1 1080 198 0 0 chr17 28649821 28650013 -60854540 + AluSg/x SINE Alu 103 294 -16 589 225 0 23 chr17 28650666 28650795 -60853758 - L2 LINE L2 0 3313 3188 2170 100 7 3 chr17 28651292 28651582 -60852971 - AluSg SINE Alu -19 291 1 1807 126 0 8 chr17 28652293 28652548 -60852005 - AluSx SINE Alu -21 291 39 25 0 0 0 chr17 28652941 28652966 -60851587 + AT_rich Low_complexity Low_complexity 1 25 0 2100 92 0 7 chr17 28653293 28653574 -60850979 + AluY SINE Alu 1 279 -32 1230 179 5 18 chr17 28653620 28653838 -60850715 - AluJb SINE Alu -32 280 66 285 136 0 0 chr17 28653838 28653882 -60850671 - FLAM_A SINE Alu -22 111 68 880 104 0 0 chr17 28654371 28654486 -60850067 + AluSq SINE Alu 1 115 -197 2319 182 65 7 chr17 28654496 28654940 -60849613 + MER9 LTR ERVK 38 507 -4 5624 200 29 31 chr17 28654945 28656306 -60848247 + HERVK14 LTR ERVK 4 1381 -4564 5925 152 88 40 chr17 28656306 28657515 -60847038 - MER11A LTR ERVK 0 1266 1 8104 72 1 0 chr17 28657516 28658511 -60846042 - HERVK11 LTR ERVK -1 7952 6957 * 28630 83 6 2 chr17 28658496 28665168 -60839385 - HERVK11 LTR ERVK -1186 6767 1 4239 163 27 41 chr17 28665168 28666027 -60838526 - MER11C LTR ERVK 0 1071 225 1890 77 0 0 chr17 28666422 28666656 -60837897 - MER11B LTR ERVK -1002 234 1 28236 130 4 1 chr17 28666656 28670711 -60833842 + HERVK9 LTR ERVK 1121 5186 -730 566 301 5 19 chr17 28670682 28670898 -60833655 + HERVK9 LTR ERVK 5801 6013 -1739 * 3084 102 0 26 chr17 28670913 28671343 -60833210 + HERVK9 LTR ERVK 5183 5601 -315 1874 254 27 27 chr17 28671441 28672360 -60832193 + HERVK9 LTR ERVK 5635 5916 0 2268 186 62 9 chr17 28672367 28672819 -60831734 + MER9 LTR ERVK 34 509 -2 1111 168 20 10 chr17 28672821 28673082 -60831471 + AluSq SINE Alu 109 371 0 1346 109 0 26 chr17 28673120 28673312 -60831241 + AluSx SINE Alu 3 189 -123 818 144 30 8 chr17 28673314 28673446 -60831107 - AluSq SINE Alu -147 166 32 21 0 0 0 chr17 28674631 28674652 -60829901 + AT_rich Low_complexity Low_complexity 1 21 0 331 266 97 26 chr17 28674673 28674827 -60829726 - Tigger8 DNA MER2_type -165 501 337 2381 101 0 0 chr17 28674991 28675297 -60829256 - AluY SINE Alu -5 306 1 243 0 0 0 chr17 28675681 28675708 -60828845 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 318 117 45 chr17 28675720 28675899 -60828654 - MIR SINE MIR -51 211 20 230 313 10 21 chr17 28675943 28676039 -60828514 + Tigger8 DNA MER2_type 141 235 -431 1750 165 7 10 chr17 28676049 28676340 -60828213 + AluJb SINE Alu 1 290 -22 2120 132 0 0 chr17 28676634 28676921 -60827632 - AluSc SINE Alu -22 287 1 2213 109 7 0 chr17 28677060 28677353 -60827200 - AluSc SINE Alu -14 295 1 2026 129 0 7 chr17 28677784 28678070 -60826483 + AluSg SINE Alu 3 286 -24 36 53 0 0 chr17 28679450 28679507 -60825046 + AT_rich Low_complexity Low_complexity 1 57 0 376 276 113 13 chr17 28679650 28679963 -60824590 - L1ME4a LINE L1 -194 5927 5571 213 39 0 0 chr17 28680130 28680156 -60824397 + (CA)n Simple_repeat Simple_repeat 1 26 0 210 367 140 10 chr17 28681062 28681269 -60823284 + L2 LINE L2 987 1220 -2094 2058 132 0 0 chr17 28681281 28681596 -60822957 + AluSg SINE Alu 2 316 0 2172 117 0 0 chr17 28681780 28682070 -60822483 - AluY SINE Alu -21 290 1 234 269 0 0 chr17 28682123 28682175 -60822378 + LTR30 LTR ERV1 1 52 -670 805 128 231 213 chr17 28682214 28682642 -60821911 + LTR12 LTR ERV1 48 483 -231 5874 133 9 36 chr17 28682659 28683629 -60820924 + HERV9 LTR ERV1 54 997 -7402 * 21891 111 10 5 chr17 28683625 28687985 -60816568 + HERV9 LTR ERV1 1155 5613 -2786 16539 115 5 15 chr17 28687977 28688344 -60816209 + HERV9 LTR ERV1 5972 6341 -2058 * 2062 53 16 0 chr17 28688344 28688589 -60815964 - L1PA5 LINE L1 -6 6148 5900 16539 115 5 15 chr17 28688589 28690674 -60813879 + HERV9 LTR ERV1 6341 8399 0 816 164 79 141 chr17 28690674 28690978 -60813575 + LTR12 LTR ERV1 1 285 -429 355 178 33 22 chr17 28690979 28691069 -60813484 + LTR30 LTR ERV1 553 643 -79 656 130 0 0 chr17 28691071 28691171 -60813382 + LTR12 LTR ERV1 615 714 0 226 309 147 33 chr17 28691322 28691594 -60812959 + L2 LINE L2 1791 2093 -1221 382 256 78 0 chr17 28691596 28691686 -60812867 - MER117 DNA MER1_type -97 100 4 725 161 17 0 chr17 28692211 28692329 -60812224 + FLAM_A SINE Alu 20 139 -3 311 326 121 23 chr17 28692429 28692644 -60811909 + MIR SINE MIR 3 238 -24 2072 114 7 3 chr17 28692728 28693018 -60811535 + AluSc SINE Alu 1 291 -18 2106 110 0 14 chr17 28693148 28693438 -60811115 - AluSx SINE Alu -26 286 1 319 339 15 39 chr17 28693621 28693751 -60810802 - L2 LINE L2 -1 3271 3145 219 362 35 26 chr17 28693837 28693953 -60810600 - L2 LINE L2 -177 3095 2979 4443 217 52 64 chr17 28694227 28696104 -60808449 - L1ME1 LINE L1 -5 6161 4261 4562 81 242 0 chr17 28696104 28696769 -60807784 + LTR12 LTR ERV1 1 826 0 4443 217 52 64 chr17 28696769 28696816 -60807737 - L1ME1 LINE L1 -1905 4261 4215 369 98 0 216 chr17 28696816 28696918 -60807635 + MADE1 DNA Mariner 1 80 0 4443 217 52 64 chr17 28696918 28697220 -60807333 - L1ME1 LINE L1 -1951 4215 3976 277 258 40 53 chr17 28697266 28697417 -60807136 - L1MD3 LINE L1 -14 7981 7833 245 257 53 71 chr17 28697589 28697702 -60806851 - MIR SINE MIR -80 128 18 839 171 0 7 chr17 28697884 28698024 -60806529 + FRAM SINE Alu 23 161 -15 1876 145 3 14 chr17 28698027 28698163 -60806390 + AluSx SINE Alu 1 137 -175 2138 124 7 10 chr17 28698163 28698462 -60806091 + AluSp SINE Alu 1 298 -15 1876 145 3 14 chr17 28698462 28698614 -60805939 + AluSx SINE Alu 137 286 -26 423 0 0 0 chr17 28698621 28698668 -60805885 + (TA)n Simple_repeat Simple_repeat 1 47 0 751 171 0 0 chr17 28698777 28698894 -60805659 + AluSq SINE Alu 117 233 -80 670 95 0 0 chr17 28698894 28698978 -60805575 - AluS SINE Alu -215 97 14 7446 58 37 0 chr17 28698988 28699993 -60804560 - L1PA8 LINE L1 -3 6169 5152 469 329 74 0 chr17 28700320 28700469 -60804084 - L2 LINE L2 0 3272 3113 1843 221 7 9 chr17 28701457 28701906 -60802647 + L1MC2 LINE L1 4759 5206 -940 2047 126 4 0 chr17 28701907 28702217 -60802336 + AluSg SINE Alu 5 315 0 2919 189 89 9 chr17 28702217 28702910 -60801643 + L1MC2 LINE L1 5596 6344 0 283 240 130 0 chr17 28703103 28703203 -60801350 + L1ME4a LINE L1 5971 6083 -38 220 211 26 0 chr17 28703455 28703531 -60801022 + (CTTA)n Simple_repeat Simple_repeat 2 79 0 296 125 0 28 chr17 28705284 28705356 -60799197 - L1MD1 LINE L1 0 6242 6173 924 178 11 23 chr17 28705357 28705531 -60799022 + FRAM SINE Alu 1 172 -4 4483 171 42 12 chr17 28705553 28705817 -60798736 + Tigger1 DNA MER2_type 14 269 -2149 1794 166 4 4 chr17 28705817 28706149 -60798404 - AluJb SINE Alu 0 337 6 4483 171 42 12 chr17 28706149 28706725 -60797828 + Tigger1 DNA MER2_type 269 880 -1538 1106 90 0 0 chr17 28706726 28706860 -60797693 + AluSg SINE Alu 1 134 -176 2125 134 0 0 chr17 28706860 28707170 -60797383 + AluSx SINE Alu 1 310 0 7243 119 19 1 chr17 28707170 28708306 -60796247 + Tigger1 DNA MER2_type 870 2026 -392 398 317 70 0 chr17 28708306 28708448 -60796105 + MIR SINE MIR 110 261 -1 2237 110 3 3 chr17 28708575 28708876 -60795677 - AluSq SINE Alu -12 301 1 2022 139 3 10 chr17 28709081 28709384 -60795169 + AluSx SINE Alu 1 301 -11 1773 145 53 11 chr17 28709393 28709676 -60794877 + AluSx SINE Alu 1 295 -17 1739 152 11 20 chr17 28709677 28710026 -60794527 - L1MB4 LINE L1 -7 6173 5828 1977 115 56 0 chr17 28710028 28710297 -60794256 - AluSx SINE Alu -28 284 1 1114 274 146 15 chr17 28710542 28710600 -60793953 - L1ME3 LINE L1 -3 6159 6110 1760 180 7 3 chr17 28710600 28710895 -60793658 - AluJo SINE Alu -16 296 1 1114 274 146 15 chr17 28710895 28711358 -60793195 - L1ME3 LINE L1 -52 6110 5570 304 113 0 70 chr17 28711361 28711432 -60793121 - Alu SINE Alu 0 302 237 259 137 78 0 chr17 28711486 28711537 -60793016 - MLT1D LTR MaLR -49 456 402 333 282 55 55 chr17 28711908 28712089 -60792464 - MIR SINE MIR -72 190 10 1609 187 93 50 chr17 28712169 28712362 -60792191 - MLT1D LTR MaLR -49 456 273 1856 165 0 16 chr17 28712362 28712677 -60791876 + AluJb SINE Alu 3 312 0 1609 187 93 50 chr17 28712677 28712901 -60791652 - MLT1D LTR MaLR -232 273 21 328 262 13 54 chr17 28713018 28713167 -60791386 - L1MC4a LINE L1 -1954 5854 5712 1530 213 0 20 chr17 28713250 28713555 -60790998 + AluJo SINE Alu 1 299 -13 207 366 24 0 chr17 28714013 28714095 -60790458 - MIR SINE MIR -132 130 47 527 226 61 38 chr17 28714325 28714537 -60790016 - L1MC5 LINE L1 -44 7917 7701 1593 170 46 21 chr17 28714544 28714827 -60789726 - AluJb SINE Alu -22 290 1 748 230 47 72 chr17 28714869 28715104 -60789449 + MER102b DNA MER1_type 106 334 -7 480 244 25 75 chr17 28715351 28715511 -60789042 - MIR SINE MIR -79 183 32 1718 158 20 20 chr17 28717591 28717889 -60786664 - AluJo SINE Alu -14 298 1 544 274 37 37 chr17 28717892 28718137 -60786416 - Tigger8 DNA MER2_type -186 480 236 2213 97 56 0 chr17 28719093 28719434 -60785119 + L1PA11 LINE L1 5805 6164 -10 1592 109 0 0 chr17 28719440 28719642 -60784911 + AluSq SINE Alu 5 206 -107 333 102 0 0 chr17 28719642 28719691 -60784862 + AluSq SINE Alu 241 289 -11 21 0 0 0 chr17 28719701 28719722 -60784831 + AT_rich Low_complexity Low_complexity 1 21 0 530 264 54 18 chr17 28720379 28720546 -60784007 + MIR SINE MIR 20 192 -70 298 224 50 162 chr17 28720557 28720659 -60783894 + Charlie8 DNA MER1_type 1 113 -217 687 205 0 0 chr17 28720659 28720781 -60783772 + FLAM_A SINE Alu 1 122 -11 298 224 50 162 chr17 28720781 28720937 -60783616 + Charlie8 DNA MER1_type 113 230 -100 224 359 21 0 chr17 28721891 28722033 -60782520 + L2 LINE L2 2906 3050 -222 253 294 22 14 chr17 28722501 28722621 -60781932 + MIR SINE MIR 15 134 -74 338 277 21 0 chr17 28726060 28726154 -60778399 + MER5A DNA MER1_type 17 112 -77 544 258 7 26 chr17 28727821 28727976 -60776577 - MER103 DNA DNA -12 154 3 734 231 214 31 chr17 28728035 28728395 -60776158 + L2 LINE L2 2888 3313 0 262 310 194 19 chr17 28728408 28728624 -60775929 + MIR SINE MIR 8 261 -1 236 257 40 0 chr17 28729450 28729524 -60775029 - L2 LINE L2 -60 3212 3136 407 293 29 0 chr17 28730439 28730579 -60773974 - MIR SINE MIR -77 185 42 352 305 65 7 chr17 28731605 28731759 -60772794 - MIR3 SINE MIR -26 182 20 236 262 213 18 chr17 28732365 28732529 -60772024 + L2 LINE L2 3118 3313 0 361 277 294 6 chr17 28732654 28732831 -60771722 + MIR SINE MIR 6 233 -29 183 80 0 0 chr17 28733269 28733294 -60771259 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 225 250 83 24 chr17 28733304 28733388 -60771165 - L2 LINE L2 -35 3237 3149 358 290 191 16 chr17 28733464 28733647 -60770906 + MIR SINE MIR 22 236 -26 421 329 127 4 chr17 28734780 28735008 -60769545 + MIR SINE MIR 2 257 -5 2019 121 13 30 chr17 28735173 28735478 -60769075 - AluSx SINE Alu -12 300 1 1554 131 177 0 chr17 28736955 28737215 -60767338 + AluSx SINE Alu 1 306 -6 1714 162 14 17 chr17 28738244 28738541 -60766012 - AluJo SINE Alu -16 296 1 807 243 74 102 chr17 28740179 28740388 -60764165 - MER113 DNA MER1_type? -42 479 266 2199 116 3 22 chr17 28740388 28740707 -60763846 + AluSp SINE Alu 1 313 0 807 243 74 102 chr17 28740707 28740970 -60763583 - MER113 DNA MER1_type? -255 266 20 184 392 20 0 chr17 28741855 28741957 -60762596 + MIR SINE MIR 79 182 -80 382 241 0 18 chr17 28742328 28742440 -60762113 - MER103 DNA DNA -15 151 42 1963 144 10 10 chr17 28742943 28743242 -60761311 + AluJo SINE Alu 1 299 -13 235 254 51 0 chr17 28743742 28743801 -60760752 + MER94 DNA DNA 4 65 -69 392 345 113 13 chr17 28743934 28744163 -60760390 - MIR SINE MIR -3 259 8 195 303 15 0 chr17 28744240 28744306 -60760247 - L3b LINE CR1 -238 1345 1279 421 225 193 66 chr17 28745243 28745368 -60759185 + MIR SINE MIR 38 146 -116 1737 156 3 73 chr17 28745368 28745519 -60759034 + AluJb SINE Alu 1 120 -192 2215 96 0 23 chr17 28745519 28745822 -60758731 + AluSx SINE Alu 14 309 -3 1737 156 3 73 chr17 28745822 28745984 -60758569 + AluJb SINE Alu 120 292 -20 421 225 193 66 chr17 28745984 28746071 -60758482 + MIR SINE MIR 146 262 0 198 265 76 98 chr17 28746049 28746181 -60758372 - L2 LINE L2 -10 3303 3175 * 2299 115 3 0 chr17 28746585 28746890 -60757663 + AluSx SINE Alu 5 310 -2 495 281 36 7 chr17 28746937 28747076 -60757477 - MIR SINE MIR -6 256 114 295 244 22 33 chr17 28747377 28747467 -60757086 + L2 LINE L2 3184 3272 0 621 181 56 7 chr17 28747806 28747950 -60756603 - L2 LINE L2 0 3313 3163 391 151 0 19 chr17 28748087 28748167 -60756386 - AluS SINE Alu -246 62 4 738 223 51 0 chr17 28748314 28748489 -60756064 - MER5A DNA MER1_type -4 185 2 337 335 132 7 chr17 28748612 28748764 -60755789 - MIR SINE MIR -71 191 21 353 288 88 65 chr17 28748923 28749093 -60755460 + MIR SINE MIR 86 259 -3 248 303 114 15 chr17 28749299 28749375 -60755178 - L2 LINE L2 -2 3270 3203 4878 116 35 13 chr17 28749375 28750141 -60754412 - LTR39 LTR ERV1 0 783 1 248 303 114 15 chr17 28750141 28750196 -60754357 - L2 LINE L2 -69 3203 3126 342 283 22 74 chr17 28750199 28750468 -60754085 - LTR39-int LTR ERV1 -58 8062 7808 318 348 37 29 chr17 28750539 28750783 -60753770 - LTR49-int LTR ERV1 -535 4419 4174 4428 88 4 128 chr17 28750910 28751394 -60753159 + LTR12 LTR ERV1 1 350 -364 2448 70 6 10 chr17 28751394 28751706 -60752847 + AluY SINE Alu 1 311 0 4428 88 4 128 chr17 28751706 28752031 -60752522 + LTR12 LTR ERV1 350 714 0 9152 145 63 49 chr17 28752917 28753440 -60751113 - LTR49-int LTR ERV1 -612 5571 5057 2393 71 0 13 chr17 28753440 28753751 -60750802 - AluY SINE Alu -4 307 1 9152 145 63 49 chr17 28753751 28755443 -60749110 - LTR49-int LTR ERV1 -1126 5057 2181 2054 143 0 7 chr17 28755443 28755743 -60748810 + AluJo SINE Alu 1 298 -14 9152 145 63 49 chr17 28755743 28755903 -60748650 - LTR49-int LTR ERV1 -4002 2181 2025 2423 212 34 58 chr17 28755933 28756636 -60747917 - LTR49-int LTR ERV1 -3019 3312 2627 1200 244 29 92 chr17 28756605 28756994 -60747559 - LTR49-int LTR ERV1 -3569 2377 2034 * 387 0 0 0 chr17 28756994 28757037 -60747516 + (CA)n Simple_repeat Simple_repeat 2 44 0 1200 244 29 92 chr17 28757037 28757225 -60747328 - LTR49-int LTR ERV1 -3912 2034 1836 464 63 16 0 chr17 28757225 28757288 -60747265 + MER57B LTR ERV1 1 64 -370 * 1293 101 53 0 chr17 28757286 28757475 -60747078 - MER57B LTR ERV1 -167 267 69 336 254 66 16 chr17 28759936 28760058 -60744495 + MER65A LTR ERV1 1 128 -317 232 346 9 0 chr17 28760184 28760291 -60744262 + MER65B LTR ERV1 262 369 -162 * 282 231 55 93 chr17 28760258 28760440 -60744113 + MER65A LTR ERV1 267 441 -4 287 362 0 21 chr17 28760452 28760593 -60743960 + MER65A-int LTR ERV1 12 149 -4722 375 161 0 103 chr17 28760989 28761076 -60743477 + LTR57-int LTR ERVL 323 400 -4943 782 151 5 87 chr17 28761106 28761291 -60743262 + MER65A-int LTR ERV1 618 787 -6750 372 120 80 0 chr17 28761354 28761429 -60743124 + LTR39 LTR ERV1 19 99 -684 6056 104 52 67 chr17 28761649 28761679 -60742874 - Tigger3b DNA MER2_type -1797 1231 1202 2574 121 6 3 chr17 28761679 28762042 -60742511 - THE1B LTR MaLR 0 364 1 6056 104 52 67 chr17 28762042 28763153 -60741400 - Tigger3b DNA MER2_type -1826 1202 106 4441 133 59 39 chr17 28763469 28764237 -60740316 + LTR39 LTR ERV1 1 783 0 1200 214 88 9 chr17 28764896 28765213 -60739340 + MER65A-int LTR ERV1 939 1280 -5051 2275 136 140 5 chr17 28765213 28765619 -60738934 + LTR8A LTR ERV1 1 461 -266 843 182 12 18 chr17 28765627 28765792 -60738761 + LTR8A LTR ERV1 564 727 0 335 251 1 0 chr17 28765792 28765883 -60738670 + LTR49-int LTR ERV1 746 1917 -2963 451 168 32 11 chr17 28765999 28766094 -60738459 + LTR49-int LTR ERV1 1372 1468 -4863 1200 105 0 0 chr17 28766094 28766266 -60738287 - MER57B LTR ERV1 0 434 263 233 346 9 0 chr17 28766291 28766398 -60738155 - MER65B LTR ERV1 -162 369 262 336 254 66 16 chr17 28766524 28766646 -60737907 - MER65A LTR ERV1 -317 128 1 217 198 30 119 chr17 28767122 28767223 -60737330 - L2 LINE L2 -179 3134 3043 281 81 48 65 chr17 28767223 28767285 -60737268 - Alu SINE Alu -7 294 234 756 237 8 71 chr17 28767311 28767564 -60736989 - L2 LINE L2 -1537 1777 1541 180 256 0 0 chr17 28767558 28767601 -60736952 + L3 LINE CR1 1408 1450 -127 * 1796 154 29 20 chr17 28768119 28768310 -60736243 - AluJo SINE Alu -2 310 113 369 0 0 0 chr17 28768310 28768351 -60736202 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1796 154 29 20 chr17 28768351 28768465 -60736088 - AluJo SINE Alu -199 113 2 209 191 0 0 chr17 28768621 28768663 -60735890 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 464 313 110 0 chr17 28768717 28768880 -60735673 + MIR SINE MIR 2 182 -80 992 292 102 33 chr17 28768903 28769324 -60735229 - L2 LINE L2 0 3313 2864 525 200 48 24 chr17 28772290 28772415 -60732138 + MER45A DNA AcHobo 51 178 0 373 361 89 9 chr17 28772625 28772838 -60731715 - MIR SINE MIR -16 246 17 252 0 0 0 chr17 28773155 28773183 -60731370 + (CA)n Simple_repeat Simple_repeat 2 29 0 687 254 17 6 chr17 28774099 28774272 -60730281 + MIR SINE MIR 5 179 -83 593 269 23 29 chr17 28774444 28774615 -60729938 - MER5B DNA MER1_type -8 170 1 195 152 0 0 chr17 28774650 28774683 -60729870 + MIR3 SINE MIR 170 202 -6 2092 140 3 3 chr17 28774697 28775005 -60729548 + AluJo SINE Alu 1 308 -4 2200 114 6 16 chr17 28775162 28775478 -60729075 + AluSq SINE Alu 1 313 0 856 231 18 74 chr17 28775617 28775846 -60728707 - MIR SINE MIR -3 259 44 299 291 209 0 chr17 28776132 28776266 -60728287 + MIR3 SINE MIR 38 199 -9 285 190 215 13 chr17 28776303 28776382 -60728171 - MIR SINE MIR -34 228 134 294 51 0 0 chr17 28776382 28776421 -60728132 - MADE1 DNA Mariner 0 80 42 303 93 0 0 chr17 28777208 28777251 -60727302 + (CA)n Simple_repeat Simple_repeat 1 43 0 597 306 102 0 chr17 28777374 28777580 -60726973 - L3 LINE CR1 -2 1575 1349 300 265 31 20 chr17 28778752 28778850 -60725703 - MIR3 SINE MIR -22 186 88 189 107 0 0 chr17 28779101 28779129 -60725424 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 2054 142 0 0 chr17 28779133 28779421 -60725132 - AluJb SINE Alu -24 288 1 572 183 61 61 chr17 28779490 28779670 -60724883 - L1MC5 LINE L1 -30 7931 7752 22 88 0 0 chr17 28779734 28779791 -60724762 + AT_rich Low_complexity Low_complexity 1 57 0 2894 146 6 10 chr17 28780280 28780767 -60723786 + MER31A LTR ERV1 1 485 0 306 0 0 0 chr17 28780800 28780834 -60723719 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 373 296 136 15 chr17 28781269 28781468 -60723085 + L1ME4a LINE L1 5895 6117 -4 1728 126 24 38 chr17 28781724 28782017 -60722536 + AluJb SINE Alu 1 289 -23 23 0 0 0 chr17 28782798 28782821 -60721732 + GC_rich Low_complexity Low_complexity 1 23 0 305 264 14 0 chr17 28783136 28783208 -60721345 - MIR SINE MIR -110 152 80 378 107 0 0 chr17 28783717 28783773 -60720780 + (CA)n Simple_repeat Simple_repeat 2 57 0 185 295 369 0 chr17 28784287 28784409 -60720144 + MIR SINE MIR 1 167 -95 672 269 25 0 chr17 28784629 28784789 -60719764 + MIR SINE MIR 39 202 -60 271 240 13 13 chr17 28785092 28785167 -60719386 + FLAM_A SINE Alu 58 132 -1 180 111 0 0 chr17 28785170 28785197 -60719356 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 1992 138 10 16 chr17 28785201 28785506 -60719047 + AluSx SINE Alu 6 308 -4 247 296 28 74 chr17 28786041 28786257 -60718296 + L2 LINE L2 2840 3045 -227 724 275 92 0 chr17 28786339 28786557 -60717996 - MIR SINE MIR -12 250 13 279 331 47 60 chr17 28786820 28787079 -60717474 + MIR SINE MIR 1 255 -7 405 308 101 0 chr17 28787093 28787262 -60717291 - MIR SINE MIR -17 245 60 1409 147 9 18 chr17 28788586 28788810 -60715743 + AluJo SINE Alu 1 222 -90 291 184 35 11 chr17 28788818 28788905 -60715648 + GA-rich Low_complexity Low_complexity 3 91 0 384 235 96 37 chr17 28788923 28789059 -60715494 + MIR SINE MIR 47 190 -72 180 0 0 0 chr17 28789628 28789648 -60714905 + (T)n Simple_repeat Simple_repeat 1 20 0 1884 161 0 7 chr17 28790276 28790590 -60713963 - AluSx SINE Alu 0 312 1 278 237 26 0 chr17 28790968 28791044 -60713509 - MER34B LTR ERV1 -159 406 329 236 153 17 68 chr17 28791342 28791401 -60713152 - MIR SINE MIR -59 203 148 673 252 38 4 chr17 28791618 28791844 -60712709 - MER34B LTR ERV1 -4 561 325 1628 148 69 31 chr17 28791844 28792135 -60712418 + AluJo SINE Alu 1 302 -10 673 252 38 4 chr17 28792135 28792146 -60712407 - MER34B LTR ERV1 -240 325 316 618 14 0 0 chr17 28792146 28792217 -60712336 + (GGAAA)n Simple_repeat Simple_repeat 1 71 0 539 259 112 79 chr17 28792236 28792568 -60711985 - MER34 LTR ERV1 -222 343 1 325 311 48 0 chr17 28792579 28792682 -60711871 + MIR SINE MIR 47 154 -108 432 193 18 0 chr17 28792934 28793048 -60711505 - L1MB4 LINE L1 0 6180 6065 629 244 101 0 chr17 28793666 28793862 -60710691 - MIR SINE MIR -21 241 18 762 203 46 46 chr17 28793882 28794117 -60710436 - MIR SINE MIR -35 227 2 377 229 38 8 chr17 28794302 28794433 -60710120 - MER113 DNA MER1_type? -366 155 21 185 317 29 19 chr17 28794471 28794575 -60709978 + MIR3 SINE MIR 83 187 -21 821 271 93 16 chr17 28795026 28795347 -60709206 - LTR16C LTR ERVL -40 451 106 1922 153 0 33 chr17 28795903 28796203 -60708350 + AluJb SINE Alu 1 290 -22 816 172 43 37 chr17 28796211 28796374 -60708179 + FRAM SINE Alu 1 161 -15 329 272 224 0 chr17 28796448 28796573 -60707980 + L1ME4a LINE L1 5966 6118 -3 339 273 84 35 chr17 28797119 28797262 -60707291 + MIR SINE MIR 37 186 -76 590 267 67 6 chr17 28797454 28797619 -60706934 - MIR SINE MIR -56 206 32 431 254 82 100 chr17 28798071 28798402 -60706151 + L2 LINE L2 2932 3256 -16 3543 171 35 22 chr17 28798402 28799119 -60705434 - L1MB7 LINE L1 -14 6170 5445 387 0 0 0 chr17 28799154 28799197 -60705356 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 229 339 0 43 chr17 28799938 28800053 -60704500 + MER117 DNA MER1_type 8 117 -80 270 292 22 22 chr17 28800364 28800453 -60704100 + MIR SINE MIR 90 178 -84 1955 153 7 3 chr17 28801727 28802028 -60702525 - AluJo SINE Alu -10 302 1 760 212 45 76 chr17 28802028 28802120 -60702433 - L1MB7 LINE L1 -749 5397 5304 2033 127 38 0 chr17 28802120 28802411 -60702142 - AluSx SINE Alu -10 302 1 760 212 45 76 chr17 28802411 28802606 -60701947 - L1MB7 LINE L1 -842 5304 5119 213 343 56 0 chr17 28802625 28802733 -60701820 - L2 LINE L2 -262 3010 2897 2528 112 38 67 chr17 28802742 28802966 -60701587 - Tigger2a DNA MER2_type -2274 434 228 1739 158 13 47 chr17 28802966 28803264 -60701289 + AluJo SINE Alu 1 288 -24 2528 112 38 67 chr17 28803264 28803486 -60701067 - Tigger2a DNA MER2_type -2480 228 1 2365 136 32 25 chr17 28803569 28803974 -60700579 - MSTB LTR MaLR 0 426 19 1822 150 3 33 chr17 28804193 28804499 -60700054 + AluJb SINE Alu 1 297 -15 192 40 0 0 chr17 28804615 28804640 -60699913 + (CA)n Simple_repeat Simple_repeat 1 25 0 584 275 69 0 chr17 28804918 28805107 -60699446 - MIR SINE MIR -8 254 53 353 330 24 28 chr17 28805118 28805330 -60699223 - L2 LINE L2 -801 2513 2303 2316 117 95 35 chr17 28805389 28805746 -60698807 + MSTA LTR MaLR 1 386 -42 2084 138 10 0 chr17 28805746 28806050 -60698503 - AluSx SINE Alu -5 307 1 2316 117 95 35 chr17 28806050 28806093 -60698460 + MSTA LTR MaLR 386 425 -3 194 274 0 0 chr17 28806766 28806817 -60697736 + L2 LINE L2 3261 3311 -2 809 277 93 27 chr17 28806883 28807248 -60697305 + L2 LINE L2 2925 3313 0 1646 232 65 34 chr17 28808259 28808567 -60695986 + L1ME3 LINE L1 4884 5181 -981 1745 155 3 47 chr17 28808567 28808884 -60695669 + AluJo SINE Alu 1 303 -9 1646 232 65 34 chr17 28808884 28809257 -60695296 + L1ME3 LINE L1 5181 5596 -566 357 171 154 57 chr17 28809269 28809392 -60695161 + L1ME3 LINE L1 5657 5791 -379 602 248 15 0 chr17 28809514 28809647 -60694906 + MER58B DNA MER1_type 207 341 0 332 244 12 12 chr17 28809652 28809738 -60694815 + L1ME3 LINE L1 5807 5892 -278 1004 161 0 0 chr17 28809743 28809898 -60694655 + AluSg/x SINE Alu 140 294 -18 879 227 104 20 chr17 28809898 28810149 -60694404 + L1ME3 LINE L1 5885 6156 -6 505 301 11 16 chr17 28810404 28810590 -60693963 - MER5A DNA MER1_type -3 186 2 6723 125 18 20 chr17 28810828 28811902 -60692651 - MER11C LTR ERVK 0 1071 1 2223 105 6 19 chr17 28812103 28812416 -60692137 - AluSg SINE Alu 0 310 2 253 266 0 0 chr17 28812629 28812693 -60691860 + L1MC/D LINE L1 5827 5890 -1918 1501 181 0 65 chr17 28812855 28813165 -60691388 - AluJo SINE Alu -22 290 1 191 200 0 20 chr17 28813240 28813290 -60691263 + GA-rich Low_complexity Low_complexity 4 52 0 412 299 183 0 chr17 28813731 28813928 -60690625 + MIR SINE MIR 24 256 -6 424 221 122 0 chr17 28814157 28814288 -60690265 + MER103 DNA DNA 14 160 -6 211 329 161 13 chr17 28814507 28814656 -60689897 + MIR SINE MIR 20 190 -72 320 202 46 101 chr17 28814711 28814820 -60689733 - MLT1K LTR MaLR 0 588 486 1718 169 43 10 chr17 28815437 28815738 -60688815 - AluJb SINE Alu -1 311 1 802 238 72 78 chr17 28815738 28816045 -60688508 - L1ME3 LINE L1 -55 6107 5803 292 300 11 0 chr17 28816105 28816195 -60688358 + L1M4 LINE L1 4007 4097 -2049 1629 166 7 43 chr17 28816209 28816511 -60688042 + AluJo SINE Alu 11 301 -11 422 234 86 16 chr17 28816545 28816673 -60687880 + MIR3 SINE MIR 42 178 -30 681 115 88 0 chr17 28816718 28816831 -60687722 + L1MB4 LINE L1 5836 5958 -222 2210 206 226 13 chr17 28816847 28817918 -60686635 + L1 LINE L1 3254 4722 -1424 731 234 5 16 chr17 28817934 28818118 -60686435 + MIR SINE MIR 81 262 0 360 254 66 16 chr17 28820577 28820699 -60683854 + MER65B LTR ERV1 1 128 -403 231 293 47 28 chr17 28820825 28820931 -60683622 + MER65B LTR ERV1 262 369 -162 * 311 231 55 93 chr17 28820898 28821080 -60683473 + MER65A LTR ERV1 267 441 -4 297 339 57 21 chr17 28821092 28821284 -60683269 + MER65A-int LTR ERV1 12 210 -4661 396 161 0 103 chr17 28821629 28821716 -60682837 + LTR57-int LTR ERVL 323 400 -4943 804 151 5 87 chr17 28821746 28821931 -60682622 + MER65A-int LTR ERV1 618 787 -6750 397 120 80 0 chr17 28821994 28822069 -60682484 + LTR39 LTR ERV1 19 99 -684 6464 102 52 67 chr17 28822289 28822319 -60682234 - Tigger3b DNA MER2_type -1797 1231 1202 2544 121 6 3 chr17 28822319 28822682 -60681871 - THE1B LTR MaLR 0 364 1 6464 102 52 67 chr17 28822682 28823793 -60680760 - Tigger3b DNA MER2_type -1826 1202 106 4367 134 59 39 chr17 28824109 28824877 -60679676 + LTR39 LTR ERV1 1 783 0 1296 214 88 9 chr17 28825536 28825853 -60678700 + MER65A-int LTR ERV1 939 1280 -5051 2366 136 140 5 chr17 28825853 28826259 -60678294 + LTR8A LTR ERV1 1 461 -266 890 182 12 18 chr17 28826267 28826432 -60678121 + LTR8A LTR ERV1 564 727 0 372 153 178 59 chr17 28826432 28826550 -60678003 + MER65A-int LTR ERV1 1277 1917 -2963 481 168 32 11 chr17 28826639 28826734 -60677819 + LOR1-int LTR ERV1 1372 1468 -4863 1260 105 0 0 chr17 28826734 28826906 -60677647 - MER57B LTR ERV1 0 434 263 373 270 101 62 chr17 28826931 28827286 -60677267 - MER65B LTR ERV1 -162 369 1 1373 101 53 0 chr17 28829746 28829935 -60674618 + MER57B LTR ERV1 69 267 -167 489 63 16 0 chr17 28829933 28829996 -60674557 - MER57B LTR ERV1 -370 64 1 * 1324 244 29 92 chr17 28829996 28830184 -60674369 + LOR1-int LTR ERV1 1836 2034 -3912 423 0 0 0 chr17 28830184 28830231 -60674322 + (TG)n Simple_repeat Simple_repeat 2 48 0 1324 244 29 92 chr17 28830231 28830620 -60673933 + LOR1-int LTR ERV1 2034 2377 -3569 * 2582 212 34 58 chr17 28830589 28831292 -60673261 + LOR1-int LTR ERV1 2627 3312 -3019 9720 153 58 57 chr17 28831308 28831482 -60673071 + LOR1-int LTR ERV1 2025 2197 -3986 2024 143 0 7 chr17 28831482 28831782 -60672771 - AluJo SINE Alu -14 298 1 9720 153 58 57 chr17 28831782 28833469 -60671084 + LOR1-int LTR ERV1 2197 3881 -2302 2378 71 0 13 chr17 28833469 28833780 -60670773 + AluY SINE Alu 1 307 -4 9720 153 58 57 chr17 28833780 28834303 -60670250 + LOR1-int LTR ERV1 3881 5571 -612 5940 83 37 17 chr17 28835189 28835514 -60669039 - LTR12 LTR ERV1 0 826 509 2359 77 6 10 chr17 28835514 28835826 -60668727 - AluY SINE Alu 0 311 1 5940 83 37 17 chr17 28835826 28836310 -60668243 - LTR12 LTR ERV1 -317 509 1 313 328 41 33 chr17 28836437 28836681 -60667872 + LOR1-int LTR ERV1 4174 4419 -535 362 279 22 74 chr17 28836752 28837021 -60667532 + LOR1-int LTR ERV1 7808 8062 -58 214 303 114 15 chr17 28837024 28837079 -60667474 + L2 LINE L2 3126 3174 -98 5135 116 35 13 chr17 28837079 28837845 -60666708 + LTR39 LTR ERV1 1 783 0 214 303 114 15 chr17 28837845 28837921 -60666632 + L2 LINE L2 3174 3270 -2 308 288 88 65 chr17 28838127 28838297 -60666256 - MIR SINE MIR -3 259 86 343 373 8 8 chr17 28838456 28838574 -60665979 + MIR SINE MIR 21 138 -124 758 223 51 0 chr17 28838731 28838906 -60665647 + MER5A DNA MER1_type 2 185 -4 1997 145 3 7 chr17 28839080 28839384 -60665169 + AluJb SINE Alu 10 312 0 21 36 0 0 chr17 28839575 28839603 -60664950 + AT_rich Low_complexity Low_complexity 1 28 0 1802 125 0 0 chr17 28839942 28840182 -60664371 - AluSg SINE Alu -14 296 57 511 250 39 32 chr17 28840186 28840342 -60664211 + MER63A DNA MER1_type 54 210 0 473 224 45 37 chr17 28840498 28840632 -60663921 - MER5B DNA MER1_type -30 148 14 1102 138 48 0 chr17 28840745 28840934 -60663619 - L1MA9 LINE L1 -1 6311 6114 265 306 72 0 chr17 28841928 28842039 -60662514 - MIR SINE MIR -46 216 98 2743 210 22 82 chr17 28842065 28842750 -60661803 - L1ME1 LINE L1 -195 5971 5339 1473 175 20 10 chr17 28842750 28843042 -60661511 - L1MB3 LINE L1 -2 6181 5887 2743 210 22 82 chr17 28843042 28843164 -60661389 - L1ME1 LINE L1 -827 5339 5211 1117 110 0 0 chr17 28843174 28843329 -60661224 - AluSg/x SINE Alu -6 304 150 1245 241 37 49 chr17 28843329 28843760 -60660793 + L2 LINE L2 2868 3293 -20 613 305 13 89 chr17 28843786 28843966 -60660587 - L2 LINE L2 -14 3258 3123 1342 196 77 25 chr17 28843966 28844293 -60660260 - MER2 DNA MER2_type 0 344 1 613 305 13 89 chr17 28844293 28844505 -60660048 - L2 LINE L2 -149 3123 2896 1816 168 0 7 chr17 28844729 28845015 -60659538 + AluJb SINE Alu 1 284 -28 222 105 0 0 chr17 28845015 28845053 -60659500 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 1150 277 37 21 chr17 28845069 28845444 -60659109 + L1MC4a LINE L1 5517 5897 -1911 435 266 0 59 chr17 28846513 28846682 -60657871 - MIR SINE MIR -84 178 20 256 316 31 10 chr17 28847085 28847183 -60657370 + L3b LINE CR1 1294 1393 -190 2277 113 36 36 chr17 28847246 28847610 -60656943 + THE1B LTR MaLR 1 364 0 317 333 141 0 chr17 28848448 28848583 -60655970 - MIR SINE MIR -60 202 49 296 256 0 0 chr17 28849168 28849246 -60655307 + MIR SINE MIR 185 262 0 428 323 41 95 chr17 28849339 28849801 -60654752 + L2 LINE L2 2828 3264 -8 2057 136 3 3 chr17 28850732 28851033 -60653520 + AluSx SINE Alu 1 301 -11 353 331 54 0 chr17 28851311 28851495 -60653058 + MIR SINE MIR 34 227 -35 238 269 59 76 chr17 28851626 28851864 -60652689 - L2 LINE L2 -219 3053 2820 1858 169 0 3 chr17 28852660 28852973 -60651580 + AluJo SINE Alu 1 312 0 532 328 100 30 chr17 28852695 28853254 -60651299 - L1ME4a LINE L1 -38 6083 5772 438 288 50 31 chr17 28853339 28853499 -60651054 + MIR SINE MIR 53 215 -47 903 166 20 0 chr17 28853585 28853736 -60650817 - MER2 DNA MER2_type 0 345 192 2257 162 22 36 chr17 28853739 28853961 -60650592 - Tigger2a DNA MER2_type -2274 434 219 881 26 188 0 chr17 28853961 28854078 -60650475 + MER85 DNA T2_type 1 139 0 2257 162 22 36 chr17 28854078 28854268 -60650285 - Tigger2a DNA MER2_type -2489 219 28 986 172 6 0 chr17 28854280 28854454 -60650099 - MER2 DNA MER2_type -155 190 16 410 247 151 64 chr17 28854564 28854783 -60649770 + MIR SINE MIR 12 249 -13 2024 105 6 35 chr17 28854984 28855297 -60649256 + AluSq SINE Alu 1 304 -9 233 201 28 35 chr17 28855505 28855650 -60648903 + CT-rich Low_complexity Low_complexity 1 144 0 343 264 120 24 chr17 28855762 28855887 -60648666 - LTR33A LTR ERVL -2 521 385 613 259 204 15 chr17 28856250 28856473 -60648080 + MIR SINE MIR 2 244 -18 187 239 15 60 chr17 28856447 28856514 -60648039 - L2 LINE L2 -39 3274 3211 * 1068 230 94 19 chr17 28856762 28857113 -60647440 - L1MD2 LINE L1 -17 6149 5791 1494 166 25 11 chr17 28857235 28857513 -60647040 + AluJo SINE Alu 1 282 -30 539 157 20 177 chr17 28858069 28858216 -60646337 + FLAM_C SINE Alu 2 125 -18 570 242 30 4 chr17 28858441 28858584 -60645969 + MLT1H1 LTR MaLR 16 171 -378 2171 185 61 18 chr17 28858612 28859113 -60645440 + LTR27 LTR ERV1 3 501 0 869 219 62 33 chr17 28859150 28859465 -60645088 + MLT1H1 LTR MaLR 205 554 -1 4236 147 71 20 chr17 28859818 28860562 -60643991 + LTR39 LTR ERV1 2 783 0 302 304 11 0 chr17 28860597 28860689 -60643864 - MIR SINE MIR -14 248 156 224 221 195 0 chr17 28861138 28861215 -60643338 + MIR SINE MIR 84 175 -87 1679 164 11 0 chr17 28861327 28861614 -60642939 + AluJb SINE Alu 1 290 -22 4537 157 23 24 chr17 28861765 28862627 -60641926 - L1MB7 LINE L1 -16 6168 5308 423 38 0 0 chr17 28863144 28863197 -60641356 + (TG)n Simple_repeat Simple_repeat 1 53 0 210 147 0 0 chr17 28863429 28863463 -60641090 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 218 177 81 16 chr17 28863564 28863626 -60640927 + L2 LINE L2 3134 3199 -73 * 503 175 61 26 chr17 28863614 28863728 -60640825 - L2 LINE L2 -4 3268 3151 2167 52 24 21 chr17 28863819 28864109 -60640444 - AluY SINE Alu -20 291 1 266 263 151 22 chr17 28864971 28865150 -60639403 + L2 LINE L2 2776 2977 -337 2291 103 0 0 chr17 28865927 28866239 -60638314 + AluSx SINE Alu 1 312 0 378 235 39 20 chr17 28866361 28866463 -60638090 - MIR SINE MIR -131 131 28 195 234 0 64 chr17 28868058 28868105 -60636448 - MIR SINE MIR -198 64 21 210 254 0 0 chr17 28868192 28868251 -60636302 + A-rich Low_complexity Low_complexity 1 59 0 209 257 177 35 chr17 28869435 28869548 -60635005 - MIR SINE MIR -20 242 114 2261 88 7 0 chr17 28869968 28870275 -60634278 + AluSp SINE Alu 3 311 -2 1460 176 49 189 chr17 28870487 28870823 -60633730 - L1MD3 LINE L1 0 8042 7661 790 126 9 0 chr17 28870823 28870934 -60633619 - AluJ SINE Alu -18 294 183 750 175 33 0 chr17 28870942 28871062 -60633491 - AluJ SINE Alu -176 126 3 1460 176 49 189 chr17 28871062 28871324 -60633229 - L1MD3 LINE L1 -388 7654 7438 412 248 183 26 chr17 28872148 28872301 -60632252 + MER5A DNA MER1_type 10 186 -3 1671 148 78 0 chr17 28872399 28872683 -60631870 + AluSx SINE Alu 1 306 -6 565 198 19 0 chr17 28872732 28872838 -60631715 - MIR SINE MIR -126 136 29 315 0 0 0 chr17 28872845 28872880 -60631673 + (A)n Simple_repeat Simple_repeat 1 35 0 737 263 106 28 chr17 28872885 28873140 -60631413 - L1ME1 LINE L1 -7 6159 5885 325 268 99 0 chr17 28873436 28873578 -60630975 + L2 LINE L2 2899 3054 -218 186 269 115 0 chr17 28873768 28873820 -60630733 - MIR SINE MIR -60 148 91 605 294 167 46 chr17 28874056 28874438 -60630115 + MLT1K LTR MaLR 2 465 -123 1744 146 36 7 chr17 28874438 28874740 -60629813 + AluJo SINE Alu 1 311 -1 605 294 167 46 chr17 28874740 28874878 -60629675 + MLT1K LTR MaLR 465 585 -3 293 281 67 94 chr17 28875478 28875646 -60628907 + L2 LINE L2 2348 2519 -795 2401 78 13 0 chr17 28875646 28875955 -60628598 - AluSp SINE Alu 0 313 1 293 281 67 94 chr17 28875955 28876192 -60628361 + L2 LINE L2 2519 2742 -572 210 304 20 10 chr17 28876472 28876574 -60627979 + L2 LINE L2 2765 2867 -447 1458 172 59 92 chr17 28876672 28876723 -60627830 - MLT2D LTR ERVL 0 414 363 414 0 0 0 chr17 28876723 28876769 -60627784 + (TG)n Simple_repeat Simple_repeat 2 47 0 1458 172 59 92 chr17 28876769 28877142 -60627411 - MLT2D LTR ERVL -51 363 4 441 295 13 6 chr17 28877515 28877671 -60626882 + L1MC4 LINE L1 7793 7949 -93 407 304 129 51 chr17 28877749 28878282 -60626271 - L3 LINE CR1 -63 1514 940 2094 108 16 0 chr17 28878306 28878612 -60625941 - AluSq SINE Alu -2 311 1 888 244 53 5 chr17 28878961 28879170 -60625383 - MIR SINE MIR -31 231 13 372 297 306 0 chr17 28879161 28879390 -60625163 - L3 LINE CR1 -874 703 405 * 730 256 47 51 chr17 28880281 28880515 -60624038 + MIR SINE MIR 28 260 -2 774 303 18 5 chr17 28880711 28880932 -60623621 + MIR SINE MIR 21 244 -18 1713 183 10 3 chr17 28880937 28881238 -60623315 - AluJb SINE Alu -8 304 2 1645 163 31 25 chr17 28881510 28881836 -60622717 + L1MB8 LINE L1 5850 6177 -1 23 33 0 0 chr17 28882267 28882297 -60622256 + GC_rich Low_complexity Low_complexity 1 30 0 204 125 0 0 chr17 28883213 28883245 -60621308 + (T)n Simple_repeat Simple_repeat 1 32 0 252 242 32 21 chr17 28885619 28885714 -60618839 + GA-rich Low_complexity Low_complexity 3 98 0 194 263 18 18 chr17 28885881 28885938 -60618615 - L2 LINE L2 -9 3263 3207 * 255 307 195 12 chr17 28885932 28886173 -60618380 + L2 LINE L2 2606 2890 -424 1084 239 91 69 chr17 28886358 28886463 -60618090 - LTR16C LTR ERVL -6 485 384 1902 138 22 16 chr17 28886463 28886774 -60617779 + AluSq SINE Alu 1 313 0 1084 239 91 69 chr17 28886774 28887096 -60617457 - LTR16C LTR ERVL -107 384 12 241 258 0 15 chr17 28887106 28887172 -60617381 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 646 255 121 15 chr17 28887260 28887582 -60616971 + L2 LINE L2 1012 1424 -1890 1648 110 4 0 chr17 28887658 28887895 -60616658 + AluSp SINE Alu 1 238 -75 696 92 0 0 chr17 28887900 28887998 -60616555 + AluSp/q SINE Alu 212 309 -4 264 333 31 0 chr17 28888002 28888131 -60616422 + L2 LINE L2 1545 1677 -1637 454 239 167 0 chr17 28888142 28888298 -60616255 + MER5A DNA MER1_type 4 189 0 398 321 194 17 chr17 28888429 28888722 -60615831 - L2 LINE L2 0 3313 2969 366 282 39 32 chr17 28888702 28888858 -60615695 + L2 LINE L2 1785 1941 -1373 * 1611 182 0 16 chr17 28888943 28889250 -60615303 + AluJb SINE Alu 1 302 -10 2239 110 0 0 chr17 28889252 28889560 -60614993 + AluSg SINE Alu 1 308 -2 7880 19 0 0 chr17 28889681 28890811 -60613742 - L1PA2 LINE L1 -6 6149 5020 4054 26 0 0 chr17 28890811 28891279 -60613274 + L1PA2 LINE L1 4535 5002 -1144 349 276 0 11 chr17 28891630 28891717 -60612836 - Tigger8 DNA MER2_type -550 116 31 1808 140 40 0 chr17 28891775 28892103 -60612450 - AluSx SINE Alu 0 340 1 1008 191 46 66 chr17 28892395 28892589 -60611964 + MER58B DNA MER1_type 106 296 -2124 2018 127 7 0 chr17 28892589 28892896 -60611657 + AluSx SINE Alu 1 309 -3 1008 191 46 66 chr17 28892896 28892942 -60611611 + MER58B DNA MER1_type 296 341 0 183 327 168 18 chr17 28896751 28896864 -60607689 - L2 LINE L2 -4 3268 3139 316 235 52 66 chr17 28897009 28897092 -60607461 - MIR SINE MIR -7 255 173 4174 107 28 28 chr17 28897092 28897534 -60607019 + MER41B LTR ERV1 1 445 -190 2009 129 3 0 chr17 28897534 28897828 -60606725 + AluSx SINE Alu 9 303 -9 4174 107 28 28 chr17 28897828 28898020 -60606533 + MER41B LTR ERV1 444 635 0 316 235 52 66 chr17 28898020 28898072 -60606481 - MIR SINE MIR -89 173 122 2025 99 0 3 chr17 28898073 28898382 -60606171 + AluSc SINE Alu 1 308 0 737 258 85 88 chr17 28898466 28898646 -60605907 + MLT1J LTR MaLR 25 204 -307 1455 175 40 15 chr17 28898646 28898920 -60605633 + AluJb SINE Alu 1 281 -31 237 98 0 0 chr17 28898925 28898966 -60605587 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 737 258 85 88 chr17 28898966 28899224 -60605329 + MLT1J LTR MaLR 208 468 -43 390 229 108 0 chr17 28899337 28899420 -60605133 - L2 LINE L2 -19 3294 3203 2010 68 64 0 chr17 28899879 28900166 -60604387 - AluSc SINE Alu 0 304 1 503 280 106 26 chr17 28900283 28900472 -60604081 + MIR SINE MIR 30 233 -29 2261 86 0 3 chr17 28900476 28900779 -60603774 - AluSq SINE Alu -11 302 1 4905 18 7 0 chr17 28901154 28901710 -60602843 - L1PA3 LINE L1 0 6155 5596 507 17 0 0 chr17 28901789 28901849 -60602704 + (CA)n Simple_repeat Simple_repeat 1 60 0 313 273 153 7 chr17 28901876 28902026 -60602527 + L2 LINE L2 2435 2606 -708 425 221 214 7 chr17 28902040 28902185 -60602368 + MER5A DNA MER1_type 9 183 -6 1507 124 4 4 chr17 28902293 28902519 -60602034 - AluSx SINE Alu -86 226 1 418 293 94 50 chr17 28902530 28902827 -60601726 - L1MEd LINE L1 -5567 552 243 235 0 0 0 chr17 28903006 28903032 -60601521 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2120 81 3 3 chr17 28903032 28903317 -60601236 - AluSp SINE Alu -1 310 1 288 368 14 7 chr17 28903422 28903566 -60600987 + L2 LINE L2 2683 2827 -487 615 175 23 128 chr17 28903656 28903724 -60600829 + Charlie5 DNA MER1_type 2356 2430 -155 1707 161 0 23 chr17 28903724 28904023 -60600530 - AluJo SINE Alu -20 292 1 615 175 23 128 chr17 28904023 28904092 -60600461 + Charlie5 DNA MER1_type 2430 2505 -80 2192 107 0 3 chr17 28904092 28904400 -60600153 - AluSg SINE Alu -3 307 1 615 175 23 128 chr17 28904400 28904423 -60600130 + Charlie5 DNA MER1_type 2505 2529 -56 750 157 16 0 chr17 28904423 28904544 -60600009 + FLAM_A SINE Alu 2 124 -9 615 175 23 128 chr17 28904544 28904638 -60599915 + Charlie5 DNA MER1_type 2529 2585 0 589 299 26 26 chr17 28905125 28905319 -60599234 + MIR SINE MIR 68 261 -1 846 173 0 0 chr17 28905576 28905709 -60598844 + FLAM_C SINE Alu 1 133 0 1923 108 56 95 chr17 28905729 28906119 -60598434 - THE1C LTR MaLR 0 375 1 834 197 0 0 chr17 28906125 28906277 -60598276 + AluJb SINE Alu 144 295 -17 324 165 29 107 chr17 28906417 28906520 -60598033 + LTR67 LTR ERVL 461 555 -2 277 154 19 0 chr17 28906775 28906827 -60597726 + MIR SINE MIR 80 132 -130 186 103 0 0 chr17 28906833 28906862 -60597691 + (CA)n Simple_repeat Simple_repeat 2 30 0 2160 96 0 0 chr17 28906862 28907154 -60597399 - AluSc SINE Alu -17 292 1 343 183 0 0 chr17 28907168 28907228 -60597325 - MLT2C1 LTR ERVL -51 346 287 * 440 203 42 70 chr17 28907178 28907321 -60597232 - MLT1E3 LTR MaLR -421 203 65 * 847 151 0 7 chr17 28907225 28907364 -60597189 - MLT2C1 LTR ERVL -259 138 1 260 263 105 11 chr17 28907364 28907459 -60597094 + MIR SINE MIR 143 246 -16 595 215 77 82 chr17 28907526 28907721 -60596832 - MIR SINE MIR -1 261 68 1988 134 0 28 chr17 28908569 28908705 -60595848 + AluJb SINE Alu 1 139 -173 2159 97 13 6 chr17 28908705 28909016 -60595537 + AluSq SINE Alu 1 313 0 1988 134 0 28 chr17 28909016 28909200 -60595353 + AluJb SINE Alu 139 312 0 1260 258 70 38 chr17 28910330 28910702 -60593851 + LTR16C LTR ERVL 73 456 -35 221 328 0 0 chr17 28910725 28910792 -60593761 + L2 LINE L2 2638 2704 -610 324 0 0 0 chr17 28910792 28910828 -60593725 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 833 134 0 0 chr17 28910839 28910958 -60593595 - FLAM_C SINE Alu -24 119 1 925 300 160 10 chr17 28910960 28911486 -60593067 + L2 LINE L2 2689 3313 0 581 361 91 12 chr17 28911483 28911912 -60592641 - L2 LINE L2 -698 2616 2154 * 499 323 112 36 chr17 28912147 28912503 -60592050 - L2 LINE L2 -1174 2140 1758 280 198 111 12 chr17 28912509 28912590 -60591963 + L1ME3 LINE L1 5620 5708 -454 2014 113 0 7 chr17 28912590 28912918 -60591635 - AluSx SINE Alu 0 328 3 1056 135 6 12 chr17 28912923 28913136 -60591417 - AluSg/x SINE Alu 0 335 124 546 168 0 107 chr17 28913150 28913269 -60591284 + L1ME3 LINE L1 6028 6129 -33 2217 104 0 0 chr17 28913269 28913566 -60590987 + AluSp SINE Alu 1 297 -16 546 168 0 107 chr17 28913566 28913595 -60590958 + L1ME3 LINE L1 6129 6160 -2 561 128 0 0 chr17 28913608 28913686 -60590867 + AluS SINE Alu 2 79 -233 2439 55 7 0 chr17 28913693 28914002 -60590551 - AluSp SINE Alu -2 311 1 1738 109 0 4 chr17 28914002 28914249 -60590304 + AluSg SINE Alu 64 310 0 1994 220 65 33 chr17 28914407 28914445 -60590108 + L1MC4 LINE L1 7288 7323 -719 1795 168 7 0 chr17 28914445 28914743 -60589810 - AluJo SINE Alu -12 300 1 1994 220 65 33 chr17 28914743 28914999 -60589554 + L1MC4 LINE L1 7323 7569 -473 2141 110 0 3 chr17 28914999 28915298 -60589255 + AluSg SINE Alu 1 298 -12 1994 220 65 33 chr17 28915298 28915575 -60588978 + L1MC4 LINE L1 7569 7878 -164 696 148 0 0 chr17 28915575 28915683 -60588870 - FLAM_A SINE Alu -15 127 20 656 168 64 69 chr17 28915685 28915858 -60588695 + L1MC4 LINE L1 7871 8042 0 1692 160 14 3 chr17 28915882 28916175 -60588378 + AluJb SINE Alu 3 298 -14 22 0 0 0 chr17 28916225 28916247 -60588306 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr17 28916495 28916532 -60588021 + (CA)n Simple_repeat Simple_repeat 2 38 0 710 332 4 27 chr17 28916586 28916842 -60587711 + MIR SINE MIR 1 250 -12 378 259 53 38 chr17 28916965 28917096 -60587457 - MIR SINE MIR -57 205 73 1617 114 9 0 chr17 28917114 28917342 -60587211 - MER30 DNA MER1_type 0 230 1 1958 102 60 0 chr17 28917895 28918179 -60586374 - AluSg SINE Alu -7 303 3 257 50 0 25 chr17 28918554 28918594 -60585959 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 286 324 49 0 chr17 28918663 28918765 -60585788 + MIR3 SINE MIR 85 191 -17 633 193 36 50 chr17 28919448 28919588 -60584965 - LTR67 LTR ERVL -2 555 418 1533 178 7 18 chr17 28920004 28920285 -60584268 - AluJo SINE Alu -34 278 1 223 244 51 77 chr17 28920330 28920345 -60584208 - MIR SINE MIR -149 113 99 2260 172 80 11 chr17 28920345 28920782 -60583771 + MLT1C LTR MaLR 1 467 0 223 244 51 77 chr17 28920782 28920844 -60583709 - MIR SINE MIR -163 99 38 502 301 96 4 chr17 28920954 28921193 -60583360 - L2 LINE L2 -925 2389 2129 956 238 128 63 chr17 28921194 28921514 -60583039 + MLT1J LTR MaLR 2 361 -150 2261 143 58 15 chr17 28921514 28921926 -60582627 - MSTB1 LTR MaLR 0 432 3 956 238 128 63 chr17 28921926 28922051 -60582502 + MLT1J LTR MaLR 361 476 -35 327 292 89 86 chr17 28922305 28922476 -60582077 + MLT1K LTR MaLR 194 363 -225 1296 186 47 99 chr17 28922476 28922858 -60581695 - MLT1A1 LTR MaLR -1 364 3 327 292 89 86 chr17 28922858 28922943 -60581610 + MLT1K LTR MaLR 363 446 -142 5563 67 12 0 chr17 28922943 28923626 -60580927 - LTR8 LTR ERV1 0 691 1 327 292 89 86 chr17 28923626 28923762 -60580791 + MLT1K LTR MaLR 446 588 0 374 326 181 26 chr17 28923764 28924024 -60580529 - L2 LINE L2 -1253 2061 1843 186 43 0 0 chr17 28924024 28924047 -60580506 + (GGAAA)n Simple_repeat Simple_repeat 1 23 0 374 326 181 26 chr17 28924047 28924709 -60579844 - L2 LINE L2 -1471 1843 996 2141 48 17 17 chr17 28925179 28925498 -60579055 + AluY SINE Alu 1 311 0 911 123 0 0 chr17 28925882 28926020 -60578533 - AluJo SINE Alu -39 273 136 4085 113 38 13 chr17 28926026 28926654 -60577899 + LTR9B LTR ERV1 1 644 0 1849 74 4 4 chr17 28927021 28927264 -60577289 - AluSp SINE Alu -70 243 1 374 239 0 11 chr17 28927358 28927446 -60577107 - MLT1K LTR MaLR 0 588 502 219 225 0 0 chr17 28927447 28927487 -60577066 - L2 LINE L2 -9 3304 3265 240 274 130 41 chr17 28927701 28927847 -60576706 - MLT1K LTR MaLR -323 265 107 1258 178 29 29 chr17 28927961 28928202 -60576351 + MIR SINE MIR 10 250 -12 201 39 0 0 chr17 28931036 28931062 -60573491 + (TG)n Simple_repeat Simple_repeat 2 27 0 1922 226 48 12 chr17 28931421 28931939 -60572614 + MLT1F LTR MaLR 1 533 -9 509 259 108 0 chr17 28931946 28932085 -60572468 - MIR SINE MIR 0 262 109 1390 220 86 48 chr17 28932103 28932498 -60572055 + LTR16A1 LTR ERVL 45 454 -3 245 263 145 0 chr17 28932506 28932526 -60572027 - MIR SINE MIR -158 104 88 1579 186 117 17 chr17 28932526 28932886 -60571667 + MSTD LTR MaLR 1 396 0 245 263 145 0 chr17 28932886 28932941 -60571612 - MIR SINE MIR -174 88 18 1523 130 8 42 chr17 28932971 28933233 -60571320 - AluJo SINE Alu -59 253 1 1742 211 23 46 chr17 28933501 28933936 -60570617 + MLT1C LTR MaLR 43 467 0 309 214 14 57 chr17 28934020 28934090 -60570463 - AluJo SINE Alu -141 161 95 288 77 0 0 chr17 28934128 28934167 -60570386 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 204 254 61 97 chr17 28934167 28934226 -60570327 - MIR SINE MIR -69 139 84 2157 132 15 26 chr17 28934226 28934567 -60569986 - MER1B DNA MER1_type 0 337 1 204 254 61 97 chr17 28934567 28934621 -60569932 - MIR SINE MIR -124 84 30 345 202 36 24 chr17 28935605 28935689 -60568864 + L2 LINE L2 3183 3267 -5 * 527 297 74 26 chr17 28935688 28935915 -60568638 + MIR SINE MIR 21 256 -6 3287 177 26 17 chr17 28936461 28937111 -60567442 + L1MB5 LINE L1 5519 6174 0 2264 43 30 27 chr17 28937192 28937492 -60567061 + AluY SINE Alu 1 301 -10 909 186 0 6 chr17 28937661 28937822 -60566731 - AluJb SINE Alu -20 292 133 2131 114 3 0 chr17 28937826 28938123 -60566430 - AluSx SINE Alu -12 300 3 318 287 69 0 chr17 28938127 28938228 -60566325 + MER5A DNA MER1_type 52 159 -30 203 227 0 23 chr17 28938661 28938705 -60565848 - MIR SINE MIR -3 259 217 * 205 231 0 0 chr17 28938674 28938713 -60565840 - L2 LINE L2 -21 3292 3254 1203 92 0 0 chr17 28938736 28938899 -60565654 - AluSc SINE Alu -5 304 142 256 254 263 34 chr17 28938915 28939033 -60565520 - MIR SINE MIR -98 164 20 1854 145 0 17 chr17 28939204 28939501 -60565052 + AluJb SINE Alu 1 292 -20 346 157 0 0 chr17 28939583 28939660 -60564893 + AluSp/q SINE Alu 235 311 0 309 222 89 33 chr17 28939779 28939869 -60564684 + MIR SINE MIR 2 96 -166 309 298 105 26 chr17 28940516 28940630 -60563923 - MIR SINE MIR -8 254 132 634 278 126 9 chr17 28940638 28940868 -60563685 - MIR SINE MIR -4 258 2 383 307 103 35 chr17 28941532 28941959 -60562594 - L2 LINE L2 -47 3266 2811 1623 148 14 24 chr17 28942146 28942436 -60562117 + AluJb SINE Alu 12 298 -14 263 359 13 0 chr17 28942876 28942954 -60561599 + MIR SINE MIR 50 128 -134 661 259 39 15 chr17 28942954 28943159 -60561394 - LTR16C LTR ERVL -9 482 273 755 201 41 24 chr17 28943162 28943331 -60561222 - MER5B DNA MER1_type -6 172 1 462 232 42 0 chr17 28943331 28943426 -60561127 - LTR16C LTR ERVL -208 283 185 227 306 216 0 chr17 28943567 28943678 -60560875 + MIR SINE MIR 125 259 -3 182 339 0 46 chr17 28943695 28943760 -60560793 + L2 LINE L2 3235 3296 -17 860 144 7 33 chr17 28943892 28944045 -60560508 - MER5B DNA MER1_type -6 172 24 223 354 31 10 chr17 28944346 28944442 -60560111 - L2 LINE L2 -6 3266 3169 2243 101 0 0 chr17 28944609 28944907 -60559646 - AluSg SINE Alu -12 298 1 757 244 120 22 chr17 28945021 28945246 -60559307 - MIR SINE MIR 0 262 16 349 285 70 51 chr17 29046210 29046368 -60458185 - L1ME4a LINE L1 -2 6119 5959 721 284 101 48 chr17 29046386 29046841 -60457712 - L1ME4a LINE L1 -205 5916 5438 216 0 0 0 chr17 29047009 29047033 -60457520 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 2223 71 14 0 chr17 29047037 29047317 -60457236 - AluSp SINE Alu -29 284 1 291 255 47 23 chr17 29047476 29047601 -60456952 + MIR3 SINE MIR 72 201 -7 1106 255 185 17 chr17 29047689 29048223 -60456330 - L2 LINE L2 -5 3308 2692 417 260 46 77 chr17 29048793 29048989 -60455564 + L2 LINE L2 3123 3312 -1 1983 141 0 6 chr17 29049271 29049583 -60454970 - AluJb SINE Alu 0 312 3 461 204 142 40 chr17 29049610 29049806 -60454747 - MIR SINE MIR -51 211 2 376 298 92 8 chr17 29049872 29050003 -60454550 + MIR SINE MIR 118 259 -3 180 176 0 0 chr17 29052292 29052326 -60452227 + CT-rich Low_complexity Low_complexity 2 35 0 1716 150 7 7 chr17 29052416 29052702 -60451851 - AluJb SINE Alu -26 286 1 447 282 96 35 chr17 29053119 29053158 -60451395 - MIR SINE MIR -43 219 184 1379 258 61 39 chr17 29053158 29053650 -60450903 - MLT1D LTR MaLR 0 505 3 447 282 96 35 chr17 29053650 29053814 -60450739 - MIR SINE MIR -78 184 10 194 298 106 11 chr17 29053931 29054025 -60450528 - L3b LINE CR1 -134 1449 1347 407 264 66 8 chr17 29054555 29054676 -60449877 - MIR SINE MIR -86 176 49 184 121 61 0 chr17 29054701 29054734 -60449819 + MIR SINE MIR 40 74 -134 181 286 43 0 chr17 29054735 29054805 -60449748 + MIR3 SINE MIR 117 189 -19 242 330 133 6 chr17 29055137 29055310 -60449243 - MIR SINE MIR -36 226 32 356 320 160 5 chr17 29055446 29055646 -60448907 - MIR SINE MIR -2 260 30 1807 168 0 3 chr17 29056240 29056537 -60448016 + AluJo SINE Alu 1 296 -16 198 244 0 0 chr17 29057540 29057581 -60446972 + MIR SINE MIR 62 102 -106 390 236 111 14 chr17 29058841 29058985 -60445568 + MIR SINE MIR 28 185 -77 463 200 296 0 chr17 29059056 29059181 -60445372 + MER5A DNA MER1_type 22 183 -6 1961 189 41 67 chr17 29060690 29061155 -60443398 + MER21B LTR ERV1 13 465 -398 628 126 0 0 chr17 29061174 29061261 -60443292 + AluJ/FLAM SINE Alu 1 87 -225 2792 137 2 28 chr17 29061295 29061762 -60442791 + LTR24 LTR ERV1 13 467 0 499 209 75 66 chr17 29061762 29062014 -60442539 + MER21B LTR ERV1 475 802 -61 375 302 88 54 chr17 29062043 29062394 -60442159 + L2 LINE L2 2498 2860 -454 302 364 67 47 chr17 29062412 29062709 -60441844 + L2 LINE L2 2970 3272 0 512 341 26 42 chr17 29062722 29062839 -60441714 + MIR SINE MIR 3 120 -142 1891 124 3 46 chr17 29062839 29063162 -60441391 - AluJb SINE Alu 0 312 4 512 341 26 42 chr17 29063162 29063308 -60441245 + MIR SINE MIR 120 262 0 326 105 53 0 chr17 29063309 29063366 -60441187 + MIR SINE MIR 124 183 -79 283 331 20 33 chr17 29063714 29063865 -60440688 - MIR3 SINE MIR -57 151 3 2122 107 0 31 chr17 29064016 29064335 -60440218 + AluSc SINE Alu 1 309 0 800 111 0 76 chr17 29064405 29064549 -60440004 + FLAM_C SINE Alu 1 133 0 189 0 0 0 chr17 29064703 29064724 -60439829 + (T)n Simple_repeat Simple_repeat 1 21 0 277 298 71 0 chr17 29064737 29064821 -60439732 - L2 LINE L2 -27 3286 3197 807 147 55 133 chr17 29065132 29065350 -60439203 + MER63A DNA MER1_type 1 201 -9 366 311 35 49 chr17 29065400 29065584 -60438969 + MIR SINE MIR 2 186 -22 210 328 127 8 chr17 29065586 29065720 -60438833 + L2 LINE L2 2915 3064 -208 4574 116 8 23 chr17 29065722 29066449 -60438104 + MER4E LTR ERV1 1 716 -50 1832 118 59 7 chr17 29066556 29066828 -60437725 - AluSx SINE Alu -26 286 1 187 337 145 0 chr17 29066968 29067051 -60437502 - L2 LINE L2 0 3272 3178 22 0 0 0 chr17 29067053 29067075 -60437478 + AT_rich Low_complexity Low_complexity 1 22 0 676 235 152 17 chr17 29067075 29067305 -60437248 - MIR SINE MIR 0 262 2 307 211 77 48 chr17 29067340 29067444 -60437109 - MIR SINE MIR -42 220 114 1743 79 0 4 chr17 29067444 29067673 -60436880 + AluY SINE Alu 84 311 0 237 236 0 0 chr17 29068489 29068544 -60436009 + L2 LINE L2 2244 2298 -1016 459 266 18 0 chr17 29068649 29068758 -60435795 - L2 LINE L2 -1 3312 3202 1909 136 33 0 chr17 29068909 29069210 -60435343 + AluSx SINE Alu 1 311 -1 265 300 40 10 chr17 29069226 29069326 -60435227 + L2 LINE L2 2662 2764 -550 1869 148 3 0 chr17 29069394 29069677 -60434876 + AluJb SINE Alu 2 285 -27 21 0 0 0 chr17 29069677 29069698 -60434855 + AT_rich Low_complexity Low_complexity 1 21 0 257 337 0 10 chr17 29069916 29070017 -60434536 + MIR SINE MIR 45 144 -64 258 138 75 138 chr17 29070024 29070104 -60434449 + L1ME2 LINE L1 6034 6108 -56 1756 147 0 51 chr17 29070108 29070420 -60434133 - AluJb SINE Alu -16 296 1 201 94 0 0 chr17 29071104 29071136 -60433417 + (CTGGGG)n Simple_repeat Simple_repeat 2 33 0 294 340 96 44 chr17 29072451 29072795 -60431758 + L2 LINE L2 2902 3263 -9 2151 120 0 0 chr17 29073040 29073340 -60431213 - AluSx SINE Alu -12 300 1 642 195 0 18 chr17 29073591 29073704 -60430849 + FLAM_A SINE Alu 11 121 -21 247 206 14 41 chr17 29073794 29073867 -60430686 - MIR SINE MIR -70 138 68 544 346 119 14 chr17 29073967 29074626 -60429927 + L2 LINE L2 2235 3106 -166 762 273 28 36 chr17 29075467 29075720 -60428833 + MIR SINE MIR 2 252 -10 522 302 126 34 chr17 29075809 29076167 -60428386 - L2 LINE L2 0 3272 2882 466 159 106 98 chr17 29076211 29076343 -60428210 + FLAM_C SINE Alu 1 133 0 201 74 0 0 chr17 29076360 29076387 -60428166 + (A)n Simple_repeat Simple_repeat 1 27 0 403 243 48 5 chr17 29076399 29076588 -60427965 + L1ME LINE L1 5255 5451 -908 224 290 194 21 chr17 29076588 29076774 -60427779 + L2 LINE L2 2959 3176 -137 2497 65 0 0 chr17 29076822 29077132 -60427421 + AluY SINE Alu 1 310 -1 245 323 20 20 chr17 29077346 29077445 -60427108 + L1ME LINE L1 5643 5741 -380 1283 141 13 22 chr17 29077561 29077813 -60426740 + AluJo SINE Alu 87 336 0 369 351 93 25 chr17 29078011 29078363 -60426190 - L2 LINE L2 -272 3000 2625 2162 110 0 0 chr17 29078434 29078726 -60425827 + AluSx SINE Alu 1 292 -20 1233 177 0 56 chr17 29078875 29079124 -60425429 - AluJo SINE Alu -77 235 1 512 254 15 15 chr17 29079127 29079261 -60425292 - MIR SINE MIR -113 149 16 2200 117 0 3 chr17 29079342 29079651 -60424902 + AluSx SINE Alu 1 308 -4 894 162 0 0 chr17 29079662 29079804 -60424749 + FLAM_C SINE Alu 1 142 -1 1890 130 9 48 chr17 29079839 29080155 -60424398 - AluSx SINE Alu -8 304 1 328 280 80 8 chr17 29080157 29080282 -60424271 - MIR SINE MIR -55 153 20 750 145 0 83 chr17 29080598 29080743 -60423810 - FLAM_C SINE Alu -10 133 1 2144 94 10 3 chr17 29080817 29081116 -60423437 - AluSx SINE Alu -11 301 1 1843 151 20 0 chr17 29081433 29081731 -60422822 - AluJb SINE Alu -2 310 7 1273 108 187 42 chr17 29081881 29082122 -60422431 - AluSx SINE Alu -16 296 21 2082 85 3 50 chr17 29082128 29082446 -60422107 - AluSx SINE Alu -8 304 2 256 264 0 29 chr17 29083716 29083786 -60420767 + MIR SINE MIR 75 143 -67 25 31 0 0 chr17 29084124 29084156 -60420397 + GC_rich Low_complexity Low_complexity 1 32 0 256 255 85 0 chr17 29085168 29085262 -60419291 - MIR SINE MIR -77 185 84 201 250 54 0 chr17 29085450 29085506 -60419047 - MIR SINE MIR -57 151 93 300 305 51 0 chr17 29085787 29085905 -60418648 - MIR SINE MIR -48 214 91 213 288 45 0 chr17 29088222 29088288 -60416265 + MIR SINE MIR 35 103 -159 646 173 0 0 chr17 29089757 29089861 -60414692 + FRAM SINE Alu 66 169 -7 1545 178 4 22 chr17 29089877 29090153 -60414400 + AluJo SINE Alu 3 273 -39 2112 113 0 16 chr17 29090166 29090476 -60414077 + AluSg SINE Alu 1 305 -5 276 281 245 10 chr17 29093215 29093407 -60411146 + MIR SINE MIR 20 256 -6 1693 157 7 33 chr17 29093613 29093912 -60410641 - AluJb SINE Alu -21 291 1 896 150 0 0 chr17 29093916 29094049 -60410504 - AluSq/x SINE Alu -179 133 1 1962 114 37 7 chr17 29096169 29096468 -60408085 + AluSx SINE Alu 1 308 -4 1967 107 3 21 chr17 29096489 29096804 -60407749 - AluSq SINE Alu 0 310 1 463 299 98 11 chr17 29097938 29098112 -60406441 - MIR3 SINE MIR -18 190 2 205 316 82 41 chr17 29099985 29100181 -60404372 - L2 LINE L2 -13 3300 3097 2029 115 3 0 chr17 29100770 29101099 -60403454 - AluSp SINE Alu 0 330 1 408 327 215 8 chr17 29101431 29101691 -60402862 - L2 LINE L2 -1 3271 2958 1410 105 0 5 chr17 29102887 29103087 -60401466 - AluSc SINE Alu -13 296 98 2437 86 0 3 chr17 29103586 29103887 -60400666 + AluSx SINE Alu 1 300 -12 2170 135 0 3 chr17 29103890 29104194 -60400359 + AluSc SINE Alu 3 305 -4 385 229 118 41 chr17 29104285 29104418 -60400135 - MIR SINE MIR -69 139 3 202 242 97 0 chr17 29105192 29105254 -60399299 - L2 LINE L2 -65 3248 3181 515 267 56 28 chr17 29106116 29106296 -60398257 - MIR SINE MIR -77 185 1 376 329 100 0 chr17 29106532 29106702 -60397851 + MIR SINE MIR 2 188 -74 1009 146 61 85 chr17 29106787 29106999 -60397554 - AluJo SINE Alu -20 292 86 2201 86 10 33 chr17 29107695 29107996 -60396557 - AluSp SINE Alu -11 302 9 349 321 124 0 chr17 29112306 29112499 -60392054 + MIR SINE MIR 22 238 -24 268 304 0 64 chr17 29112659 29112784 -60391769 + MIR SINE MIR 113 229 -33 23 0 0 0 chr17 29113251 29113274 -60391279 + AT_rich Low_complexity Low_complexity 1 23 0 1105 164 0 0 chr17 29113312 29113483 -60391070 - AluJb SINE Alu -92 220 50 509 300 7 20 chr17 29113599 29113749 -60390804 - MIR SINE MIR -108 154 7 1939 170 0 3 chr17 29115380 29115692 -60388861 + AluJb SINE Alu 1 311 -1 2113 140 0 22 chr17 29117161 29117476 -60387077 - AluJb SINE Alu -4 308 1 656 173 9 0 chr17 29118160 29118270 -60386283 + FLAM_A SINE Alu 6 116 -26 703 231 214 26 chr17 29118431 29118739 -60385814 - L2 LINE L2 -19 3294 2929 1340 171 5 0 chr17 29118757 29118967 -60385586 + AluJo SINE Alu 1 211 -101 676 265 105 58 chr17 29119024 29119367 -60385186 - L2 LINE L2 -406 2908 2550 223 274 9 104 chr17 29119438 29119544 -60385009 + L2 LINE L2 3172 3267 -5 255 269 93 74 chr17 29121475 29121691 -60382862 + L2 LINE L2 2365 2584 -730 533 183 19 29 chr17 29121718 29121822 -60382731 - L2 LINE L2 -2 3270 3168 376 321 129 42 chr17 29121818 29122341 -60382212 + L2 LINE L2 2647 3221 -92 * 1932 163 0 0 chr17 29122476 29122770 -60381783 - AluJb SINE Alu -12 300 7 315 0 0 0 chr17 29123317 29123352 -60381201 + (TG)n Simple_repeat Simple_repeat 2 36 0 271 340 35 17 chr17 29123474 29123678 -60380875 + L2 LINE L2 2765 3010 -262 548 238 56 14 chr17 29124012 29124155 -60380398 + L2 LINE L2 3122 3270 -2 252 206 215 28 chr17 29125123 29125230 -60379323 + MIR SINE MIR 17 143 -65 942 156 52 0 chr17 29125614 29125768 -60378785 - FAM SINE Alu -13 162 1 226 284 57 23 chr17 29126152 29126169 -60378384 - MIR SINE MIR -55 207 192 2140 133 0 19 chr17 29126169 29126340 -60378213 - AluSx SINE Alu -10 302 138 2495 69 10 0 chr17 29126340 29126645 -60377908 - AluSp SINE Alu -5 308 1 2140 133 0 19 chr17 29126645 29126781 -60377772 - AluSx SINE Alu -174 138 1 226 284 57 23 chr17 29126781 29126851 -60377702 - MIR SINE MIR -70 192 117 1795 141 20 46 chr17 29129154 29129460 -60375093 + AluJb SINE Alu 1 298 -14 237 245 41 0 chr17 29131241 29131290 -60373263 + L2 LINE L2 3222 3272 0 410 224 0 12 chr17 29132263 29132348 -60372205 + MIR3 SINE MIR 94 177 -31 1715 150 56 11 chr17 29132413 29132699 -60371854 - AluJb SINE Alu -13 299 1 2073 80 117 0 chr17 29132726 29133000 -60371553 + AluSx SINE Alu 1 306 -6 476 289 99 7 chr17 29133316 29133468 -60371085 + MIR SINE MIR 86 251 -11 2156 114 23 7 chr17 29133881 29134189 -60370364 + AluSq SINE Alu 1 313 0 417 20 0 0 chr17 29134574 29134624 -60369929 + (CA)n Simple_repeat Simple_repeat 1 50 0 1626 163 50 4 chr17 29134699 29134976 -60369577 + AluJo SINE Alu 2 291 -21 1981 161 130 24 chr17 29135358 29135811 -60368742 + MLT1D LTR MaLR 1 501 -4 1018 158 43 0 chr17 29137669 29137833 -60366720 + AluJo SINE Alu 2 172 -140 1362 137 136 30 chr17 29139917 29140012 -60364541 + Tigger7 DNA MER2_type 228 311 -2276 1723 130 60 0 chr17 29140012 29140281 -60364272 + AluJo SINE Alu 1 285 -27 1362 137 136 30 chr17 29140281 29140631 -60363922 + Tigger7 DNA MER2_type 311 2579 -8 1892 153 28 0 chr17 29140691 29140979 -60363574 + AluSx SINE Alu 1 296 -16 2228 123 3 3 chr17 29140979 29141280 -60363273 + AluSx SINE Alu 1 301 -11 551 190 146 7 chr17 29141290 29141427 -60363126 - MIR3 SINE MIR -23 185 30 1016 158 148 6 chr17 29141816 29141999 -60362554 + AluJo SINE Alu 85 293 -19 323 377 20 7 chr17 29142853 29142999 -60361554 + MIR3 SINE MIR 54 201 -7 463 273 15 0 chr17 29143236 29143368 -60361185 + L1MC1 LINE L1 5071 5204 -942 * 2842 166 22 20 chr17 29143362 29143918 -60360635 + L1MC1 LINE L1 5572 6128 -205 361 134 0 15 chr17 29143962 29144029 -60360524 + L1MC1 LINE L1 6264 6329 -4 612 149 79 0 chr17 29144546 29144660 -60359893 + FLAM_A SINE Alu 20 142 0 810 199 7 14 chr17 29144865 29145011 -60359542 + AluJb SINE Alu 119 263 -49 1843 56 0 0 chr17 29145035 29145248 -60359305 - AluY SINE Alu -13 298 86 897 227 44 31 chr17 29145297 29145618 -60358935 - L1M4 LINE L1 -1000 5146 4822 1436 177 57 32 chr17 29146047 29146176 -60358377 + AluJo SINE Alu 1 125 -187 1795 142 33 30 chr17 29146176 29146478 -60358075 + AluSx SINE Alu 1 303 -9 1436 177 57 32 chr17 29146478 29146631 -60357922 + AluJo SINE Alu 125 290 -22 1422 158 37 64 chr17 29146687 29146984 -60357569 - AluJo SINE Alu -18 294 6 21 0 0 0 chr17 29147266 29147287 -60357266 + AT_rich Low_complexity Low_complexity 1 21 0 208 135 0 0 chr17 29147339 29147376 -60357177 + (T)n Simple_repeat Simple_repeat 1 37 0 289 138 46 0 chr17 29147479 29147544 -60357009 - L1MB4 LINE L1 -1 6179 6112 577 143 29 9 chr17 29147560 29147665 -60356888 + FLAM_A SINE Alu 20 126 -16 419 134 12 49 chr17 29147665 29147747 -60356806 - L1MB3 LINE L1 -59 6124 6046 228 359 43 22 chr17 29147782 29147874 -60356679 - L2 LINE L2 -39 3233 3140 24 53 0 0 chr17 29147927 29147965 -60356588 + AT_rich Low_complexity Low_complexity 1 38 0 307 24 0 0 chr17 29148130 29148172 -60356381 - L1PA6 LINE L1 -2 6152 6111 376 127 0 16 chr17 29148643 29148706 -60355847 - LTR12 LTR ERV1 -631 83 22 4843 119 27 5 chr17 29148768 29149557 -60354996 + MER109 Unknown Unknown 1599 2404 -28 1984 152 0 3 chr17 29149705 29150001 -60354552 - AluJb SINE Alu -17 295 1 212 130 0 43 chr17 29150095 29150141 -60354412 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 2062 144 10 0 chr17 29150724 29151029 -60353524 + AluSx SINE Alu 1 308 -4 2139 132 0 7 chr17 29151250 29151546 -60353007 + AluSq SINE Alu 1 294 -19 28 61 0 0 chr17 29151549 29151598 -60352955 + AT_rich Low_complexity Low_complexity 1 49 0 1978 109 47 4 chr17 29152083 29152393 -60352160 - AluSx SINE Alu 0 324 3 27 0 0 0 chr17 29153231 29153258 -60351295 + AT_rich Low_complexity Low_complexity 1 27 0 944 125 0 21 chr17 29153522 29153666 -60350887 - AluSg/x SINE Alu -2 310 170 387 0 0 0 chr17 29153952 29153995 -60350558 + (TG)n Simple_repeat Simple_repeat 2 44 0 2163 110 0 10 chr17 29153996 29154287 -60350266 - AluSx SINE Alu -24 288 1 26 0 0 0 chr17 29154348 29154374 -60350179 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 29154427 29154457 -60350096 + AT_rich Low_complexity Low_complexity 1 30 0 631 114 9 44 chr17 29154487 29154601 -60349952 + AluJb SINE Alu 202 311 -1 2143 105 0 16 chr17 29154690 29155003 -60349550 + AluSg SINE Alu 1 308 -2 1470 118 141 15 chr17 29155015 29155285 -60349268 + AluSx SINE Alu 1 304 -8 2066 60 52 0 chr17 29156181 29156469 -60348084 - AluY SINE Alu 0 302 1 1933 101 42 3 chr17 29156787 29157073 -60347480 + AluSx SINE Alu 1 297 -15 192 77 0 0 chr17 29157526 29157552 -60347001 + (TA)n Simple_repeat Simple_repeat 2 27 0 1660 169 3 0 chr17 29157634 29157918 -60346635 + AluJb SINE Alu 14 298 -14 872 118 0 0 chr17 29158647 29158797 -60345756 - AluSg/x SINE Alu 0 308 159 316 273 61 50 chr17 29158807 29158906 -60345647 + L1MC4 LINE L1 6610 6709 -1333 2000 112 10 3 chr17 29159105 29159400 -60345153 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 29160065 29160088 -60344465 + AT_rich Low_complexity Low_complexity 1 23 0 813 141 0 52 chr17 29160751 29160886 -60343667 + FLAM_C SINE Alu 4 131 -12 2091 97 4 0 chr17 29161194 29161497 -60343056 - AluSg SINE Alu 0 304 1 1562 153 32 51 chr17 29161957 29162271 -60342282 + AluJb SINE Alu 1 308 -4 1789 130 13 23 chr17 29162478 29162778 -60341775 + AluJo SINE Alu 1 297 -15 557 97 11 21 chr17 29162790 29162883 -60341670 - L1MB2 LINE L1 -18 6153 6062 2127 122 0 3 chr17 29163198 29163509 -60341044 - AluSg SINE Alu 0 310 1 196 286 119 43 chr17 29164767 29164952 -60339601 + MIR SINE MIR 48 246 -16 283 212 88 88 chr17 29165223 29165360 -60339193 + L1 LINE L1 4910 5046 -1100 936 73 81 0 chr17 29165451 29165575 -60338978 - MER85 DNA T2_type -5 134 1 1574 169 17 27 chr17 29165590 29165886 -60338667 + AluJo SINE Alu 1 293 -19 2175 105 0 7 chr17 29166081 29166385 -60338168 - AluSx SINE Alu -10 302 1 256 325 48 8 chr17 29166467 29166593 -60337960 + L1MC/D LINE L1 5496 5626 -2182 1567 171 17 10 chr17 29166593 29166885 -60337668 - AluJo SINE Alu -16 296 3 2188 92 3 0 chr17 29166898 29167193 -60337360 - AluSg SINE Alu -14 296 1 21 57 0 0 chr17 29167418 29167453 -60337100 + AT_rich Low_complexity Low_complexity 1 35 0 2821 3 0 0 chr17 29167684 29167995 -60336558 + AluYa5 SINE Alu 1 311 0 502 200 110 0 chr17 29168232 29168332 -60336221 - FLAM_C SINE Alu -12 131 21 1445 181 10 30 chr17 29168436 29168734 -60335819 + AluJo SINE Alu 1 292 -20 23 0 0 0 chr17 29168805 29168828 -60335725 + AT_rich Low_complexity Low_complexity 1 23 0 2084 122 3 3 chr17 29168889 29169200 -60335353 - AluSq SINE Alu -2 311 1 776 179 0 8 chr17 29169824 29169958 -60334595 + AluJo SINE Alu 2 134 -178 1191 234 66 0 chr17 29170138 29170411 -60334142 + AluJo SINE Alu 10 300 -12 2298 93 0 3 chr17 29170674 29170984 -60333569 - AluSq SINE Alu -4 309 1 2147 100 10 3 chr17 29171044 29171344 -60333209 + AluSg SINE Alu 1 302 -8 1456 184 0 17 chr17 29171353 29171641 -60332912 + AluJb SINE Alu 1 283 -29 324 0 0 0 chr17 29171641 29171677 -60332876 + (CA)n Simple_repeat Simple_repeat 2 37 0 428 324 109 24 chr17 29171728 29171938 -60332615 - MIR SINE MIR -11 251 24 1567 167 14 44 chr17 29172053 29172370 -60332183 + AluJb SINE Alu 1 308 0 434 252 214 44 chr17 29172751 29172957 -60331596 - MIR SINE MIR -13 249 9 240 290 84 84 chr17 29173434 29173477 -60331076 - L2 LINE L2 -8 3305 3263 1462 131 161 0 chr17 29173477 29173737 -60330816 + AluSg SINE Alu 1 302 -8 240 290 84 84 chr17 29173737 29173907 -60330646 - L2 LINE L2 -49 3264 3092 1936 95 56 0 chr17 29173932 29174217 -60330336 + AluSp SINE Alu 1 301 -12 248 263 51 102 chr17 29175042 29175102 -60329451 - MER5B DNA MER1_type -62 116 63 1898 143 0 0 chr17 29175102 29175389 -60329164 + AluSx SINE Alu 1 287 -25 248 263 51 102 chr17 29175389 29175446 -60329107 - MER5B DNA MER1_type -115 63 5 435 330 32 9 chr17 29175596 29175785 -60328768 - MIR3 SINE MIR -51 211 14 2269 109 0 0 chr17 29176057 29176369 -60328184 - AluSq SINE Alu 0 313 2 1983 135 3 6 chr17 29176426 29176737 -60327816 - AluSx SINE Alu -2 310 1 2181 71 4 4 chr17 29177239 29177557 -60326996 - AluY SINE Alu 0 318 1 369 225 198 16 chr17 29177557 29177753 -60326800 - L1ME LINE L1 -561 5560 5321 261 0 0 0 chr17 29177754 29177783 -60326770 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 265 249 74 98 chr17 29177819 29178024 -60326529 - L1ME LINE L1 -853 5293 5096 2157 121 0 0 chr17 29178024 29178331 -60326222 - AluSx SINE Alu -5 307 1 265 249 74 98 chr17 29178331 29178422 -60326131 - L1ME LINE L1 -1050 5096 5004 2090 125 0 3 chr17 29178512 29178809 -60325744 - AluSg SINE Alu -14 296 1 180 0 0 0 chr17 29178824 29178844 -60325709 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 192 77 0 0 chr17 29180440 29180466 -60324087 + (A)n Simple_repeat Simple_repeat 1 26 0 2161 113 0 0 chr17 29182638 29182947 -60321606 - AluSx SINE Alu -3 309 1 4458 77 44 9 chr17 29183400 29184036 -60320517 - MER4E LTR ERV1 -108 658 1 4049 109 74 21 chr17 29191627 29192354 -60312199 + MER4A-int LTR ERV1 5831 6596 -2 526 111 89 0 chr17 29192362 29192452 -60312101 + MER4A LTR ERV1 1 98 -566 1430 154 16 94 chr17 29192505 29192823 -60311730 + MER4A LTR ERV1 372 664 0 26 30 0 0 chr17 29193336 29193369 -60311184 + AT_rich Low_complexity Low_complexity 1 33 0 1995 110 7 27 chr17 29193475 29193622 -60310931 + AluSq SINE Alu 1 140 -173 6404 129 20 31 chr17 29193622 29194705 -60309848 - MER11C LTR ERVK 0 1071 1 1995 110 7 27 chr17 29194705 29194856 -60309697 + AluSq SINE Alu 140 293 -20 966 189 17 6 chr17 29194933 29195113 -60309440 - Tigger3(Golem) DNA MER2_type 0 3029 2848 3450 82 24 9 chr17 29195114 29195567 -60308986 - LTR46 LTR ERV1 0 460 1 3317 123 22 36 chr17 29195567 29195692 -60308861 - LTR46-int LTR ERV1 0 6985 6860 1967 103 58 3 chr17 29195692 29195983 -60308570 - AluSq SINE Alu -2 311 5 3317 123 22 36 chr17 29195983 29196408 -60308145 - LTR46-int LTR ERV1 -125 6860 6443 364 193 2 30 chr17 29196408 29196486 -60308067 - AluJb SINE Alu -137 165 104 2061 116 0 0 chr17 29196617 29196934 -60307619 + AluSx SINE Alu 1 317 0 2795 53 14 8 chr17 29196934 29197289 -60307264 + L1PA8 LINE L1 5805 6161 -11 337 275 0 0 chr17 29198044 29198124 -60306429 + MLT1I LTR MaLR 98 177 -232 1823 160 0 0 chr17 29198151 29198444 -60306109 - AluJb SINE Alu -19 293 1 322 256 256 0 chr17 29198825 29198958 -60305595 - MIR SINE MIR -71 191 25 262 133 67 0 chr17 29199051 29199111 -60305442 + CT-rich Low_complexity Low_complexity 1 64 0 352 357 18 29 chr17 29199345 29199516 -60305037 + MER5A DNA MER1_type 7 186 -3 199 140 5 0 chr17 29199589 29199622 -60304931 + MIR SINE MIR 116 155 -53 193 125 21 21 chr17 29200502 29200550 -60304003 + CT-rich Low_complexity Low_complexity 1 48 0 285 287 61 17 chr17 29200567 29200682 -60303871 - L2 LINE L2 -15 3257 3138 1659 170 0 34 chr17 29201781 29201959 -60302594 - AluJb SINE Alu 0 312 148 2266 82 3 0 chr17 29201959 29202251 -60302302 - AluSp SINE Alu -20 293 1 1659 170 0 34 chr17 29202251 29202395 -60302158 - AluJb SINE Alu -164 148 1 453 292 47 37 chr17 29202495 29202709 -60301844 - MIR SINE MIR -16 246 18 845 260 45 81 chr17 29203835 29204030 -60300523 - L2 LINE L2 -2 3311 3110 1806 168 7 0 chr17 29204030 29204378 -60300175 + AluJo SINE Alu 1 350 0 845 260 45 81 chr17 29204378 29204392 -60300161 - L2 LINE L2 -203 3110 3097 698 125 0 76 chr17 29204392 29204536 -60300017 - FLAM_C SINE Alu 0 133 1 845 260 45 81 chr17 29204536 29204668 -60299885 - L2 LINE L2 -216 3097 2945 2929 13 0 0 chr17 29205219 29205529 -60299024 + AluYb8 SINE Alu 1 310 -8 1910 160 7 3 chr17 29206820 29207114 -60297439 + AluJo SINE Alu 1 295 -17 277 192 0 82 chr17 29207607 29207680 -60296873 - L3 LINE CR1 -116 1461 1395 252 100 0 0 chr17 29208672 29208712 -60295841 + (CTGGGG)n Simple_repeat Simple_repeat 1 40 0 344 203 28 126 chr17 29210497 29210640 -60293913 - MIR SINE MIR -118 144 16 293 313 12 0 chr17 29210678 29210761 -60293792 - MIR3 SINE MIR -51 157 74 449 273 0 41 chr17 29211042 29211163 -60293390 + MIR SINE MIR 30 145 -63 2294 103 10 3 chr17 29211240 29211540 -60293013 - AluSx SINE Alu -10 302 1 2029 130 10 51 chr17 29212097 29212139 -60292414 - THE1C LTR MaLR 0 375 333 2127 114 41 0 chr17 29212139 29212429 -60292124 + AluSx SINE Alu 1 302 -10 2029 130 10 51 chr17 29212429 29212777 -60291776 - THE1C LTR MaLR -42 333 1 1448 154 8 0 chr17 29212821 29213068 -60291485 + MER41B LTR ERV1 1 249 -386 963 94 31 0 chr17 29213073 29213200 -60291353 - AluSq/x SINE Alu -179 133 3 1760 147 3 14 chr17 29213201 29213472 -60291081 + MER41B LTR ERV1 237 506 -129 2246 129 3 0 chr17 29213472 29213781 -60290772 - AluSp SINE Alu -3 310 1 1760 147 3 14 chr17 29213781 29213802 -60290751 + MER41B LTR ERV1 506 526 -109 561 147 164 0 chr17 29213803 29213919 -60290634 - FLAM_C SINE Alu -7 136 2 724 142 8 0 chr17 29213925 29214045 -60290508 + MER41A LTR ERV1 433 553 -1 1246 163 163 19 chr17 29214515 29214772 -60289781 - AluJb SINE Alu -18 294 1 2307 109 0 13 chr17 29214779 29215090 -60289463 - AluSx SINE Alu -5 307 1 332 256 46 51 chr17 29215213 29215402 -60289151 - MIR3 SINE MIR -58 150 9 230 336 58 0 chr17 29216127 29216231 -60288322 + MIR3 SINE MIR 60 169 -39 27 0 0 0 chr17 29216361 29216388 -60288165 + AT_rich Low_complexity Low_complexity 1 27 0 301 277 90 2 chr17 29216412 29216538 -60288015 + MLT1J2 LTR MaLR 53 227 -284 616 182 52 57 chr17 29216542 29216719 -60287834 + MLT1H1 LTR MaLR 1 170 -420 1311 182 63 82 chr17 29216719 29217098 -60287455 + MLT1B LTR MaLR 1 372 -18 1657 224 39 32 chr17 29217187 29217593 -60286960 + LTR2 LTR ERV1 41 449 0 61703 57 3 5 chr17 29217593 29225422 -60279131 + HERVE LTR ERV1 1 7812 -1 1684 219 39 34 chr17 29225511 29225918 -60278635 + LTR2 LTR ERV1 41 449 0 708 254 134 53 chr17 29225943 29226302 -60278251 + MLT1H1 LTR MaLR 168 555 0 372 287 112 43 chr17 29226302 29226560 -60277993 + MLT1J LTR MaLR 227 502 -9 33 43 0 0 chr17 29226637 29226684 -60277869 + AT_rich Low_complexity Low_complexity 1 47 0 347 221 148 27 chr17 29227025 29227174 -60277379 - L2 LINE L2 -180 3092 2926 204 268 73 12 chr17 29229248 29229330 -60275223 + MIR SINE MIR 63 149 -113 227 232 195 0 chr17 29230595 29230677 -60273876 - MIR SINE MIR -83 179 82 217 295 26 13 chr17 29231054 29231132 -60273421 - L3b LINE CR1 -95 1488 1410 6722 66 5 61 chr17 29231134 29232145 -60272408 - SVA Other Other 0 1386 433 5594 76 28 56 chr17 29232162 29233332 -60271221 - SVA Other Other -518 868 57 504 45 0 0 chr17 29233332 29233399 -60271154 + (GGGAGA)n Simple_repeat Simple_repeat 1 67 0 231 114 0 0 chr17 29233427 29233462 -60271091 + MLT1B LTR MaLR 465 499 -6 762 218 43 21 chr17 29234976 29235126 -60269427 - L2 LINE L2 -6 3307 3151 2375 116 0 0 chr17 29235126 29235437 -60269116 + AluSx SINE Alu 1 311 -1 762 218 43 21 chr17 29235437 29235474 -60269079 - L2 LINE L2 -162 3151 3116 418 211 0 0 chr17 29235477 29235553 -60269000 + AluJ/FLAM SINE Alu 1 76 -236 873 204 35 81 chr17 29235759 29236043 -60268510 - MER58B DNA MER1_type 0 341 71 404 208 0 0 chr17 29236054 29236126 -60268427 - AluJ/FLAM SINE Alu -239 73 2 2182 122 7 0 chr17 29236136 29236432 -60268121 - AluSx SINE Alu -14 298 1 288 176 235 0 chr17 29236434 29236502 -60268051 - MER58B DNA MER1_type -257 84 1 21 0 0 0 chr17 29236616 29236637 -60267916 + AT_rich Low_complexity Low_complexity 1 21 0 2368 109 3 0 chr17 29237119 29237431 -60267122 - AluSp SINE Alu 0 313 1 414 280 85 44 chr17 29237849 29238059 -60266494 - MLT1J LTR MaLR -2 509 282 2397 104 0 0 chr17 29238059 29238367 -60266186 + AluSg SINE Alu 1 308 -2 414 280 85 44 chr17 29238367 29238449 -60266104 - MLT1J LTR MaLR -229 282 205 1685 162 0 7 chr17 29238591 29238862 -60265691 + AluSg SINE Alu 41 309 -1 1696 195 3 7 chr17 29238969 29239266 -60265287 + AluJb SINE Alu 13 308 -4 1113 111 0 12 chr17 29239270 29239442 -60265111 + L1PA11 LINE L1 6005 6174 0 2443 104 0 0 chr17 29239450 29239757 -60264796 + AluSg SINE Alu 3 309 -1 305 257 14 0 chr17 29239774 29239848 -60264705 - MLT1J LTR MaLR -315 196 122 994 250 48 0 chr17 29240062 29240290 -60264263 + MLT1J LTR MaLR 2 240 -271 1242 126 48 0 chr17 29240348 29240579 -60263974 - L1MA9 LINE L1 -1 6311 6070 251 258 34 45 chr17 29240670 29240759 -60263794 + LTR16C LTR ERVL 156 243 -248 971 138 0 14 chr17 29241276 29241421 -60263132 + FLAM_C SINE Alu 1 143 0 968 193 12 0 chr17 29241450 29241621 -60262932 + AluJb SINE Alu 120 292 -20 354 200 0 0 chr17 29241686 29241746 -60262807 - AluJo SINE Alu -123 179 120 849 37 0 0 chr17 29241772 29241880 -60262673 - L1PA6 LINE L1 -5 6149 6042 21204 119 16 20 chr17 29241880 29245350 -60259203 - L1P LINE L1 -2682 3464 11 2106 119 7 3 chr17 29245358 29245652 -60258901 - AluSq SINE Alu -16 297 3 707 217 7 0 chr17 29245658 29245796 -60258757 - FLAM_C SINE Alu -3 140 2 681 293 111 13 chr17 29245800 29246189 -60258364 + HAL1b LINE L1 415 841 -507 323 240 27 0 chr17 29246448 29246523 -60258030 + L1MC5 LINE L1 6633 6709 -1252 287 100 0 0 chr17 29246547 29246597 -60257956 - L1MA9 LINE L1 0 6312 6263 2054 132 7 3 chr17 29246598 29246887 -60257666 + AluSx SINE Alu 1 290 -22 54 0 0 0 chr17 29246909 29246963 -60257590 + AT_rich Low_complexity Low_complexity 1 54 0 1897 141 31 75 chr17 29246964 29247441 -60257112 - L1MA9 LINE L1 -43 6269 5814 566 234 105 63 chr17 29247444 29247669 -60256884 + L1MC4 LINE L1 6762 7014 -996 1044 198 113 46 chr17 29247669 29247952 -60256601 + AluJo SINE Alu 1 302 0 566 234 105 63 chr17 29247952 29247965 -60256588 + L1MC4 LINE L1 7014 7025 -985 2015 159 0 7 chr17 29247968 29248270 -60256283 + AluSx SINE Alu 1 300 -12 853 215 66 29 chr17 29248316 29248558 -60255995 + L1MC5 LINE L1 7268 7518 -443 280 242 0 0 chr17 29248579 29248641 -60255912 + GA-rich Low_complexity Low_complexity 2 63 0 2345 112 0 0 chr17 29248664 29248959 -60255594 + AluSx SINE Alu 1 295 -17 242 214 103 60 chr17 29249092 29249209 -60255344 + L1ME3A LINE L1 5988 6109 -61 336 243 14 0 chr17 29249301 29249375 -60255178 + MLT1J LTR MaLR 122 196 -315 2159 117 11 0 chr17 29249505 29249786 -60254767 - AluSx SINE Alu -24 288 5 914 205 56 8 chr17 29249861 29250095 -60254458 - L1MA9 LINE L1 -38 6274 6030 773 206 0 40 chr17 29250082 29250281 -60254272 + L1MA9 LINE L1 5846 6036 -276 * 201 329 125 29 chr17 29250376 29250616 -60253937 + L2 LINE L2 2079 2341 -973 444 260 87 7 chr17 29250633 29250783 -60253770 - MIR SINE MIR 0 262 101 188 379 0 0 chr17 29250834 29250900 -60253653 + L2 LINE L2 2398 2463 -851 929 233 18 9 chr17 29251137 29251365 -60253188 + L2 LINE L2 3084 3313 0 217 294 0 0 chr17 29251397 29251448 -60253105 + (CA)n Simple_repeat Simple_repeat 2 52 0 591 224 133 0 chr17 29251654 29251819 -60252734 + MIR SINE MIR 12 198 -64 2346 115 0 0 chr17 29252080 29252385 -60252168 + AluSx SINE Alu 1 305 -7 495 184 39 0 chr17 29252612 29252715 -60251838 + FLAM_C SINE Alu 2 108 -35 363 44 0 0 chr17 29252715 29252760 -60251793 + (TG)n Simple_repeat Simple_repeat 2 46 0 943 168 5 30 chr17 29252923 29252935 -60251618 + L1M4 LINE L1 3561 3572 -2574 2413 97 7 3 chr17 29252935 29253244 -60251309 + AluSg SINE Alu 1 310 0 943 168 5 30 chr17 29253244 29253428 -60251125 + L1M4 LINE L1 3572 3752 -2394 419 138 0 0 chr17 29253430 29253495 -60251058 + AluJ/FLAM SINE Alu 2 66 -246 292 130 0 0 chr17 29253495 29253541 -60251012 + AluS SINE Alu 40 85 -218 1475 174 20 20 chr17 29253541 29253788 -60250765 - AluJo SINE Alu -50 262 16 610 226 26 66 chr17 29253814 29253881 -60250672 - L1M4 LINE L1 -2191 3955 3887 2228 126 0 0 chr17 29253881 29254183 -60250370 - AluSx SINE Alu -10 302 1 610 226 26 66 chr17 29254183 29254341 -60250212 - L1M4 LINE L1 -2259 3887 3739 951 154 32 0 chr17 29254345 29254501 -60250052 - AluSg/x SINE Alu 0 312 152 1865 159 0 10 chr17 29254535 29254830 -60249723 + AluJb SINE Alu 1 292 -20 438 246 0 0 chr17 29254857 29254967 -60249586 + L1M4 LINE L1 4787 4896 -1250 21 0 0 0 chr17 29255104 29255125 -60249428 + AT_rich Low_complexity Low_complexity 1 21 0 2274 96 7 0 chr17 29255136 29255427 -60249126 + AluSx SINE Alu 1 293 -19 278 256 0 13 chr17 29255444 29255522 -60249031 - L1ME1 LINE L1 -23 6143 6067 * 1507 191 25 3 chr17 29255517 29255884 -60248669 + L1M4 LINE L1 4905 5279 -867 2246 125 0 0 chr17 29256223 29256534 -60248019 - AluSx SINE Alu -1 311 1 462 167 0 39 chr17 29256534 29256612 -60247941 - FRAM/FAM SINE Alu -109 67 1 399 203 0 0 chr17 29256612 29256686 -60247867 - L1M3 LINE L1 -589 5594 5521 618 203 74 42 chr17 29256686 29256903 -60247650 - Charlie2a DNA MER1_type -1143 1719 1496 535 309 18 6 chr17 29256936 29257101 -60247452 - Charlie2b DNA MER1_type -2094 688 522 478 243 142 94 chr17 29257109 29257293 -60247260 - Charlie2b DNA MER1_type -2538 324 150 2118 108 17 3 chr17 29257293 29257580 -60246973 + AluSx SINE Alu 1 291 -21 478 243 142 94 chr17 29257580 29257618 -60246935 - Charlie2b DNA MER1_type -2712 150 115 889 187 7 0 chr17 29257618 29257768 -60246785 + FRAM SINE Alu 1 151 -15 478 243 142 94 chr17 29257768 29257853 -60246700 - Charlie2b DNA MER1_type -2747 115 1 24 32 0 0 chr17 29258133 29258164 -60246389 + AT_rich Low_complexity Low_complexity 1 31 0 2292 122 0 0 chr17 29258427 29258731 -60245822 - AluSx SINE Alu -8 304 1 24 67 0 0 chr17 29260346 29260391 -60244162 + AT_rich Low_complexity Low_complexity 1 45 0 31 26 0 0 chr17 29260567 29260605 -60243948 + AT_rich Low_complexity Low_complexity 1 38 0 309 26 0 0 chr17 29260896 29260934 -60243619 + (TG)n Simple_repeat Simple_repeat 1 38 0 468 254 170 0 chr17 29261561 29261726 -60242827 + MIR SINE MIR 68 260 -2 385 245 50 70 chr17 29262289 29262489 -60242064 + LTR41 LTR ERVL 23 218 -555 308 286 11 58 chr17 29262667 29262856 -60241697 + LTR41 LTR ERVL 587 766 -7 2390 93 3 0 chr17 29263231 29263531 -60241022 - AluSp SINE Alu -12 301 1 474 202 211 0 chr17 29265469 29265578 -60238975 - AluJo SINE Alu -178 134 3 3186 149 54 7 chr17 29266315 29266892 -60237661 - Tigger4(Zombi) DNA MER2_type -2079 652 49 366 74 0 0 chr17 29266905 29266959 -60237594 + (TG)n Simple_repeat Simple_repeat 2 55 0 1741 124 47 16 chr17 29267161 29267418 -60237135 + AluSg SINE Alu 12 276 -34 1478 158 37 60 chr17 29267691 29267989 -60236564 - AluJo SINE Alu -17 295 5 2296 81 7 0 chr17 29268318 29268601 -60235952 + AluSg SINE Alu 1 285 -25 255 31 0 0 chr17 29268602 29268634 -60235919 + (CAAAC)n Simple_repeat Simple_repeat 4 35 0 2132 103 56 44 chr17 29269089 29269449 -60235104 + THE1B LTR MaLR 1 364 0 210 189 57 0 chr17 29269458 29269511 -60235042 + A-rich Low_complexity Low_complexity 2 57 0 1766 160 39 0 chr17 29270080 29270362 -60234191 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr17 29270620 29270642 -60233911 + AT_rich Low_complexity Low_complexity 1 22 0 2009 117 4 4 chr17 29270928 29271248 -60233305 - AluSx SINE Alu 0 324 5 587 174 87 14 chr17 29271366 29271504 -60233049 - LTR29 LTR ERV1 -68 554 407 1733 192 17 0 chr17 29272289 29272580 -60231973 + AluJb SINE Alu 1 296 -16 628 153 119 17 chr17 29272725 29272843 -60231710 - FLAM_A SINE Alu -3 130 1 203 0 37 0 chr17 29273631 29273658 -60230895 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 340 321 151 6 chr17 29273726 29273885 -60230668 + MIR3 SINE MIR 15 196 -12 1820 142 16 23 chr17 29273889 29274192 -60230361 - AluJb SINE Alu -11 301 1 1957 145 0 49 chr17 29274320 29274495 -60230058 - AluJo SINE Alu -3 309 156 2002 109 7 20 chr17 29274495 29274797 -60229756 - AluSx SINE Alu -10 302 5 1957 145 0 49 chr17 29274797 29274945 -60229608 - AluJo SINE Alu -156 156 2 303 270 174 26 chr17 29275290 29275405 -60229148 + MIR3 SINE MIR 10 141 -67 216 0 0 0 chr17 29276020 29276044 -60228509 + (A)n Simple_repeat Simple_repeat 1 24 0 1299 189 77 45 chr17 29276074 29276190 -60228363 + AluJo SINE Alu 3 114 -198 2103 108 0 11 chr17 29276190 29276469 -60228084 - AluSx SINE Alu -36 276 1 1299 189 77 45 chr17 29276469 29276485 -60228068 + AluJo SINE Alu 114 128 -184 275 0 0 28 chr17 29276485 29276521 -60228032 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 1299 189 77 45 chr17 29276521 29276673 -60227880 + AluJo SINE Alu 128 297 -15 199 204 61 41 chr17 29277157 29277206 -60227347 + MIR3 SINE MIR 127 176 -32 506 296 18 18 chr17 29277537 29277706 -60226847 + MLT1K LTR MaLR 70 238 -350 431 234 90 102 chr17 29277792 29278202 -60226351 + MLT1L LTR MaLR 99 503 -8 908 220 91 32 chr17 29278218 29278527 -60226026 + MLT1K LTR MaLR 258 584 -4 1364 74 165 35 chr17 29278637 29278957 -60225596 + Tigger2 DNA MER2_type 1 2579 -139 204 235 0 0 chr17 29279070 29279121 -60225432 + (TA)n Simple_repeat Simple_repeat 2 52 0 24 0 0 0 chr17 29279195 29279219 -60225334 + AT_rich Low_complexity Low_complexity 1 24 0 539 282 159 9 chr17 29279294 29279514 -60225039 + MIR SINE MIR 9 261 -1 447 195 17 103 chr17 29279938 29280112 -60224441 - L1M4 LINE L1 -2211 3935 3777 852 240 27 27 chr17 29280153 29280374 -60224179 - MIR SINE MIR -2 260 40 2343 50 10 30 chr17 29280451 29280753 -60223800 - AluY SINE Alu -15 296 1 23 54 0 0 chr17 29280895 29280932 -60223621 + AT_rich Low_complexity Low_complexity 1 37 0 218 105 81 47 chr17 29283877 29283963 -60220590 + (CTATT)n Simple_repeat Simple_repeat 2 90 0 652 273 197 25 chr17 29285565 29286101 -60218452 + L2 LINE L2 2677 3306 -7 547 267 93 61 chr17 29286078 29286325 -60218228 - MIR SINE MIR -2 260 6 * 2290 97 0 0 chr17 29286730 29287019 -60217534 + AluSq SINE Alu 1 289 -24 25 31 0 0 chr17 29287019 29287051 -60217502 + AT_rich Low_complexity Low_complexity 1 32 0 2291 91 0 36 chr17 29287564 29287873 -60216680 - AluSx SINE Alu -14 298 1 1453 146 100 43 chr17 29288069 29288349 -60216204 - AluJo SINE Alu -16 296 1 326 116 0 101 chr17 29288475 29288544 -60216009 + AluJ/FRAM SINE Alu 230 291 -11 265 326 0 11 chr17 29288860 29288952 -60215601 - L2 LINE L2 0 3313 3223 23 24 0 24 chr17 29289550 29289565 -60214988 + AT_rich Low_complexity Low_complexity 1 15 -25 1961 130 14 0 chr17 29289565 29289849 -60214704 - AluSx SINE Alu -24 288 1 23 24 0 24 chr17 29289849 29289874 -60214679 + AT_rich Low_complexity Low_complexity 15 40 0 196 308 13 13 chr17 29290514 29290592 -60213961 + L3b LINE CR1 1316 1393 -190 26 0 0 0 chr17 29290593 29290619 -60213934 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 29290920 29290950 -60213603 + AT_rich Low_complexity Low_complexity 1 30 0 2021 166 0 0 chr17 29291395 29291696 -60212857 - AluJo SINE Alu -11 301 1 864 200 0 0 chr17 29292668 29292818 -60211735 - AluJb SINE Alu -30 282 133 2095 127 0 13 chr17 29292936 29293236 -60211317 - AluSx SINE Alu -16 296 1 2367 83 0 0 chr17 29293272 29293562 -60210991 + AluY SINE Alu 1 290 -21 947 249 222 11 chr17 29295335 29295768 -60208785 + L2 LINE L2 2066 2589 -725 21 36 0 0 chr17 29295849 29295877 -60208676 + AT_rich Low_complexity Low_complexity 1 28 0 640 252 208 8 chr17 29296258 29296573 -60207980 + L2 LINE L2 2687 3061 -252 365 246 27 45 chr17 29296580 29296690 -60207863 + Tigger3(Golem) DNA MER2_type 1 108 -2921 328 125 125 0 chr17 29296690 29296762 -60207791 + Tigger3(Golem) DNA MER2_type 2284 2364 -665 948 185 85 16 chr17 29296767 29296956 -60207597 + AluJb SINE Alu 107 308 -4 3126 94 29 22 chr17 29296956 29297466 -60207087 + Tigger3(Golem) DNA MER2_type 2428 2941 -88 442 232 119 31 chr17 29297497 29297691 -60206862 + L2 LINE L2 3103 3313 0 430 320 76 12 chr17 29297680 29297852 -60206701 - MIR SINE MIR -6 256 74 * 1769 146 0 60 chr17 29297960 29298096 -60206457 + AluJb SINE Alu 1 144 -168 2201 120 3 0 chr17 29298096 29298388 -60206165 + AluSx SINE Alu 1 293 -19 1769 146 0 60 chr17 29298388 29298566 -60205987 + AluJb SINE Alu 144 296 -16 333 170 134 54 chr17 29298608 29298720 -60205833 + L1MC5 LINE L1 7114 7234 -727 248 200 31 15 chr17 29299070 29299135 -60205418 + L1MC5 LINE L1 7509 7574 -387 450 182 42 28 chr17 29299161 29299304 -60205249 + L1MC5 LINE L1 7639 7783 -178 5318 54 16 3 chr17 29299656 29300339 -60204214 - L1PA6 LINE L1 -6 6148 5457 305 285 41 24 chr17 29300441 29300525 -60204028 - L1ME LINE L1 -303 5818 5730 1989 148 6 16 chr17 29300525 29300836 -60203717 - AluSx SINE Alu -4 308 1 305 285 41 24 chr17 29300836 29300874 -60203679 - L1ME LINE L1 -391 5730 5694 274 266 92 28 chr17 29301120 29301229 -60203324 - HAL1 LINE L1 -1784 723 608 640 292 20 5 chr17 29301270 29301465 -60203088 - HAL1 LINE L1 -2108 399 202 1489 190 112 9 chr17 29301952 29302283 -60202270 + MLT1A1 LTR MaLR 1 365 0 235 95 0 0 chr17 29302298 29302340 -60202213 - Alu SINE Alu -5 298 257 276 213 163 38 chr17 29302558 29302638 -60201915 - L2 LINE L2 -1 3312 3223 1911 131 0 31 chr17 29303650 29303970 -60200583 + AluSx SINE Alu 1 311 0 981 156 85 75 chr17 29304442 29304654 -60199899 + AluJb SINE Alu 87 300 -12 1818 169 0 0 chr17 29304663 29304953 -60199600 + AluJb SINE Alu 1 290 -22 231 106 21 21 chr17 29305423 29305470 -60199083 - Alu SINE Alu -2 131 85 1288 188 33 0 chr17 29305470 29305683 -60198870 - AluJo SINE Alu -92 220 1 4277 161 83 7 chr17 29305794 29306956 -60197597 + L1MB2 LINE L1 4910 6145 -26 277 222 16 0 chr17 29307143 29307206 -60197347 - MIR SINE MIR -27 235 172 429 174 73 28 chr17 29307397 29307506 -60197047 + L1MC2 LINE L1 6226 6339 -5 2435 104 8 6 chr17 29308324 29308678 -60195875 + THE1A LTR MaLR 1 355 0 258 105 0 0 chr17 29308753 29308791 -60195762 + (A)n Simple_repeat Simple_repeat 1 38 0 2130 159 6 8 chr17 29309298 29309649 -60194904 + MLT1A1 LTR MaLR 1 350 -15 412 178 230 0 chr17 29310757 29310892 -60193661 - MER104 DNA Tc2 0 180 15 24 0 0 0 chr17 29311428 29311452 -60193101 + AT_rich Low_complexity Low_complexity 1 24 0 679 71 81 0 chr17 29311503 29311602 -60192951 - L1PA11 LINE L1 -2 6172 6066 185 244 24 0 chr17 29311912 29311953 -60192600 - L2 LINE L2 -8 3264 3223 382 276 138 79 chr17 29312302 29312781 -60191772 + L1MEd LINE L1 58 564 -5555 501 274 150 70 chr17 29312801 29313247 -60191306 + L1MEd LINE L1 610 1091 -5028 1404 177 0 8 chr17 29313293 29313536 -60191017 + AluJb SINE Alu 70 310 -2 303 263 74 47 chr17 29313544 29313734 -60190819 + L1MEd LINE L1 2116 2310 -3819 281 295 95 29 chr17 29313738 29313820 -60190733 + L1MCc LINE L1 21 96 -6327 201 94 0 0 chr17 29313820 29313852 -60190701 + (TTGG)n Simple_repeat Simple_repeat 1 32 0 281 295 95 29 chr17 29313852 29314010 -60190543 + L1MCc LINE L1 96 277 -6146 1266 233 36 96 chr17 29314212 29314657 -60189896 + L1M4 LINE L1 4339 4738 -1408 1161 164 42 19 chr17 29314657 29314870 -60189683 + MER20 DNA MER1_type 2 219 0 1266 233 36 96 chr17 29314870 29315042 -60189511 + L1M4 LINE L1 4738 4919 -1227 33 66 0 0 chr17 29315082 29315143 -60189410 + AT_rich Low_complexity Low_complexity 1 61 0 2361 81 7 0 chr17 29315201 29315497 -60189056 + AluSc SINE Alu 1 298 -11 430 254 53 9 chr17 29317375 29317489 -60187064 - MIR3 SINE MIR -81 127 9 327 227 248 7 chr17 29317639 29317780 -60186773 - MIR SINE MIR -7 255 81 381 314 72 26 chr17 29318008 29318161 -60186392 - L2 LINE L2 -1 3271 3112 1775 152 14 17 chr17 29318515 29318805 -60185748 + AluJo SINE Alu 1 289 -23 413 216 23 0 chr17 29318837 29318925 -60185628 - MIR SINE MIR 0 262 173 201 161 274 0 chr17 29319156 29319218 -60185335 - MIR SINE MIR -13 249 171 210 265 0 0 chr17 29319549 29319598 -60184955 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 199 329 27 0 chr17 29319704 29319777 -60184776 - L2 LINE L2 -1023 2291 2217 363 301 114 16 chr17 29320881 29321074 -60183479 - MIR SINE MIR -3 259 48 616 270 122 5 chr17 29321246 29321435 -60183118 + MIR SINE MIR 29 239 -23 381 75 0 0 chr17 29321453 29321506 -60183047 + (CAT)n Simple_repeat Simple_repeat 2 54 0 622 264 42 56 chr17 29321546 29321762 -60182791 - MIR SINE MIR -30 232 20 2124 109 10 3 chr17 29321873 29322166 -60182387 + AluSx SINE Alu 1 295 -17 2120 128 0 3 chr17 29324537 29324835 -60179718 + AluSc SINE Alu 1 297 -12 794 122 58 0 chr17 29327431 29327570 -60176983 - L1MB4 LINE L1 -6 6174 6028 230 355 16 16 chr17 29327580 29327704 -60176849 + L2 LINE L2 2698 2821 -493 207 356 20 0 chr17 29327792 29327893 -60176660 + L2 LINE L2 2949 3051 -221 563 240 43 33 chr17 29328049 29328223 -60176330 + MIR SINE MIR 2 175 -33 23 0 0 0 chr17 29328232 29328255 -60176298 + AT_rich Low_complexity Low_complexity 1 23 0 210 253 67 53 chr17 29328263 29328338 -60176215 + L2 LINE L2 3195 3270 -2 2051 108 24 20 chr17 29328607 29328904 -60175649 - AluSx SINE Alu -14 298 1 429 268 31 0 chr17 29329002 29329099 -60175454 - L2 LINE L2 0 3313 3214 390 254 53 0 chr17 29329418 29329532 -60175021 + MER94 DNA DNA 15 134 0 32 26 0 0 chr17 29329924 29329963 -60174590 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr17 29330907 29330927 -60173626 + (T)n Simple_repeat Simple_repeat 1 20 0 2011 125 7 13 chr17 29330973 29331276 -60173277 + AluSq SINE Alu 1 301 -12 1760 132 27 108 chr17 29332223 29332593 -60171960 + MER77 LTR ERV1 1 340 -265 627 115 0 0 chr17 29332568 29332655 -60171898 + MER77 LTR ERV1 519 605 0 * 415 212 62 2 chr17 29333052 29333192 -60171361 - MER77 LTR ERV1 -424 181 1 1225 188 0 0 chr17 29333243 29333445 -60171108 + MER2 DNA MER2_type 1 202 -143 1834 129 0 29 chr17 29333484 29333763 -60170790 - AluJb SINE Alu -37 275 5 33 25 0 0 chr17 29333770 29333810 -60170743 + AT_rich Low_complexity Low_complexity 1 40 0 916 271 36 0 chr17 29334479 29334726 -60169827 + MIR SINE MIR 6 261 -1 359 183 42 0 chr17 29334907 29334978 -60169575 + MIR SINE MIR 116 189 -73 331 301 150 31 chr17 29335597 29335790 -60168763 - L2 LINE L2 0 3313 3098 252 0 0 0 chr17 29336263 29336291 -60168262 + (T)n Simple_repeat Simple_repeat 1 28 0 456 230 204 43 chr17 29336298 29336694 -60167859 - L1MC5 LINE L1 -50 7911 7452 22 35 0 0 chr17 29336742 29336771 -60167782 + AT_rich Low_complexity Low_complexity 1 29 0 2642 249 61 14 chr17 29338311 29338416 -60166137 - L1ME3 LINE L1 -30 6132 6033 2197 100 0 3 chr17 29338416 29338705 -60165848 - AluSg SINE Alu -22 288 1 2642 249 61 14 chr17 29338705 29339367 -60165186 - L1ME3 LINE L1 -129 6033 5329 1551 229 41 81 chr17 29339543 29340271 -60164282 - L1ME3 LINE L1 -932 5214 4516 284 302 22 50 chr17 29341512 29341651 -60162902 + MER5A DNA MER1_type 44 178 -11 501 298 116 10 chr17 29341842 29342040 -60162513 + MIR SINE MIR 18 236 -26 337 316 71 51 chr17 29342376 29342572 -60161981 - MIR SINE MIR -44 218 19 1903 156 10 0 chr17 29342808 29343110 -60161443 - AluJb SINE Alu -7 305 1 1490 195 24 24 chr17 29343343 29343635 -60160918 - AluJo SINE Alu -20 292 1 252 125 75 0 chr17 29344781 29344821 -60159732 - MER5B DNA MER1_type -134 44 2 654 246 129 11 chr17 29345771 29346051 -60158502 + LTR50 LTR ERVL 483 795 0 2292 101 13 0 chr17 29346079 29346387 -60158166 + AluSx SINE Alu 1 312 0 506 291 70 67 chr17 29346529 29346661 -60157892 - L3 LINE CR1 -758 819 689 715 191 0 22 chr17 29346661 29346797 -60157756 + FLAM_C SINE Alu 1 133 0 506 291 70 67 chr17 29346797 29346949 -60157604 - L3 LINE CR1 -888 689 534 237 234 47 16 chr17 29347075 29347139 -60157414 - L3 LINE CR1 -1260 317 252 758 137 81 0 chr17 29347257 29347381 -60157172 - FRAM SINE Alu -23 153 20 770 134 0 8 chr17 29347469 29347588 -60156965 + FLAM_C SINE Alu 1 118 -15 429 20 0 0 chr17 29347592 29347642 -60156911 + (CA)n Simple_repeat Simple_repeat 2 51 0 1919 179 139 16 chr17 29347826 29348272 -60156281 - L1MC4 LINE L1 -386 7656 7156 29 0 0 0 chr17 29351710 29351739 -60152814 + AT_rich Low_complexity Low_complexity 1 29 0 435 253 84 40 chr17 29351765 29351995 -60152558 + L1MC5 LINE L1 7694 8042 0 444 248 208 41 chr17 29351999 29352418 -60152135 + L1ME3 LINE L1 4358 4846 -1300 1629 178 196 6 chr17 29352471 29353067 -60151486 + LTR50 LTR ERVL 1 795 0 859 302 39 13 chr17 29353070 29353454 -60151099 + L1ME3 LINE L1 4899 5292 -854 1533 239 31 37 chr17 29353459 29353948 -60150605 + L1ME3 LINE L1 5477 5962 -208 3757 88 132 0 chr17 29354051 29354598 -60149955 + MER41B LTR ERV1 1 619 -16 243 304 54 0 chr17 29354598 29354710 -60149843 + L1ME3 LINE L1 6011 6128 -34 758 11 11 0 chr17 29355868 29355959 -60148594 + (CA)n Simple_repeat Simple_repeat 2 93 0 1146 222 59 77 chr17 29356083 29356349 -60148204 + L1ME2 LINE L1 875 1144 -5502 580 101 157 0 chr17 29356349 29356641 -60147912 + AluSx SINE Alu 4 309 0 1146 222 59 77 chr17 29356641 29356728 -60147825 + L1ME2 LINE L1 1144 1231 -5415 2305 19 0 0 chr17 29356728 29356988 -60147565 + AluYa5 SINE Alu 52 311 0 1146 222 59 77 chr17 29356988 29357593 -60146960 + L1ME2 LINE L1 1231 1938 -4708 1011 211 26 4 chr17 29357595 29357860 -60146693 + L1ME2 LINE L1 4832 5102 -1542 * 1906 241 99 7 chr17 29357857 29358442 -60146111 + L1ME2 LINE L1 6015 6653 -9 2390 72 0 10 chr17 29358629 29358934 -60145619 - AluY SINE Alu -9 302 1 1906 140 36 0 chr17 29359612 29359891 -60144662 - AluSx SINE Alu -21 291 3 187 243 40 68 chr17 29359983 29360057 -60144496 + L2 LINE L2 3197 3268 -45 268 230 52 91 chr17 29360087 29360285 -60144268 - L1M4 LINE L1 -2256 3890 3700 2464 75 3 3 chr17 29360385 29360693 -60143860 - AluSq SINE Alu -5 308 1 2259 91 7 3 chr17 29363291 29363588 -60140965 + AluSg SINE Alu 1 298 -12 28 0 0 0 chr17 29364720 29364748 -60139805 + AT_rich Low_complexity Low_complexity 1 28 0 195 369 121 27 chr17 29364898 29365047 -60139506 - L2 LINE L2 0 3272 3110 2265 104 0 3 chr17 29365179 29365476 -60139077 - AluSc SINE Alu -13 296 1 1058 244 52 35 chr17 29365591 29366023 -60138530 + L1ME1 LINE L1 2560 2956 -3688 1532 199 42 127 chr17 29366065 29367967 -60136586 + L1ME1 LINE L1 4654 6326 -338 2868 7 0 0 chr17 29367967 29368276 -60136277 + AluYb8 SINE Alu 1 309 -9 1532 199 42 127 chr17 29368276 29368587 -60135966 + L1ME1 LINE L1 6326 6662 -2 514 251 52 58 chr17 29368692 29368863 -60135690 + L1ME LINE L1 5528 5698 -423 2361 91 3 0 chr17 29368863 29369172 -60135381 + AluSp SINE Alu 1 310 -3 514 251 52 58 chr17 29369172 29369291 -60135262 + L1ME LINE L1 5698 5816 -305 225 216 0 0 chr17 29369940 29369977 -60134576 + MIR SINE MIR 113 149 -59 336 268 0 52 chr17 29374280 29374377 -60130176 - MIR SINE MIR -109 153 62 202 329 14 27 chr17 29374405 29374478 -60130075 - MIR3 SINE MIR -133 75 4 21 0 0 0 chr17 29374570 29374591 -60129962 + AT_rich Low_complexity Low_complexity 1 21 0 2047 103 14 0 chr17 29374962 29375307 -60129246 + AluSc SINE Alu 1 349 0 219 170 0 0 chr17 29376546 29376593 -60127960 + (TA)n Simple_repeat Simple_repeat 2 48 0 300 234 45 45 chr17 29376832 29376943 -60127610 - L1ME3A LINE L1 -222 5948 5838 234 226 36 36 chr17 29376979 29377063 -60127490 - L1ME3A LINE L1 -310 5860 5777 * 666 283 50 14 chr17 29377050 29377333 -60127220 + L1ME1 LINE L1 1335 1627 -4769 565 110 31 118 chr17 29377345 29377472 -60127081 - FLAM_C SINE Alu -20 123 8 1551 202 81 53 chr17 29377478 29377972 -60126581 + L1ME1 LINE L1 1615 2122 -4274 2567 224 70 32 chr17 29377988 29378947 -60125606 + L1ME1 LINE L1 5197 6196 -39 1818 183 118 103 chr17 29379141 29380053 -60124500 + L1MC5 LINE L1 6558 7498 -463 196 339 16 0 chr17 29380213 29380275 -60124278 - MIR3 SINE MIR -2 206 144 749 149 50 0 chr17 29380979 29381100 -60123453 - FLAM_C SINE Alu -6 127 1 32 0 0 0 chr17 29381207 29381239 -60123314 + AT_rich Low_complexity Low_complexity 1 32 0 466 316 38 38 chr17 29381368 29381605 -60122948 + MLT1J LTR MaLR 4 240 -271 1374 176 13 93 chr17 29381800 29382092 -60122461 - MER7A DNA MER2_type -2695 343 88 2147 120 0 3 chr17 29382092 29382393 -60122160 - AluSx SINE Alu -12 300 1 1374 176 13 93 chr17 29382393 29382475 -60122078 - MER7A DNA MER2_type -2950 88 1 2369 91 0 0 chr17 29382989 29383286 -60121267 + AluSg SINE Alu 1 297 -13 238 289 12 48 chr17 29383378 29383461 -60121092 + MIR SINE MIR 30 109 -99 508 313 69 13 chr17 29383536 29383769 -60120784 - MIR SINE MIR -9 253 8 668 89 0 0 chr17 29384445 29384535 -60120018 + AluSc SINE Alu 209 298 -11 2896 206 68 36 chr17 29384557 29384639 -60119914 + L1ME2 LINE L1 5006 5084 -1080 2123 138 0 0 chr17 29384639 29384937 -60119616 - AluSx SINE Alu -14 298 1 2896 206 68 36 chr17 29384937 29385890 -60118663 + L1ME2 LINE L1 5084 6073 -91 1874 172 7 0 chr17 29385913 29386209 -60118344 + AluJo SINE Alu 1 298 -14 265 282 55 0 chr17 29386245 29386355 -60118198 + L1ME1 LINE L1 2713 2828 -3387 464 129 75 0 chr17 29386469 29386562 -60117991 + HY1 scRNA scRNA 7 106 -6 241 167 21 0 chr17 29386574 29386622 -60117931 + L1ME1 LINE L1 2927 2975 -3240 * 514 183 17 17 chr17 29386616 29386731 -60117822 + L1ME1 LINE L1 4893 5007 -1208 2284 104 0 0 chr17 29386731 29387030 -60117523 - AluSx SINE Alu -11 301 3 180 0 0 0 chr17 29387033 29387053 -60117500 + (TA)n Simple_repeat Simple_repeat 2 21 0 615 175 26 0 chr17 29387073 29387187 -60117366 + Ricksha DNA DNA 3 119 -1927 1763 127 55 33 chr17 29387213 29387574 -60116979 + Ricksha DNA DNA 2348 2716 -530 2204 213 70 19 chr17 29387588 29388445 -60116108 + L1ME1 LINE L1 5013 5910 -325 236 314 184 54 chr17 29388452 29389082 -60115471 - L2 LINE L2 -1370 1944 1233 196 182 0 0 chr17 29389097 29389130 -60115423 - MER5C DNA MER1_type -200 124 92 494 322 128 13 chr17 29389205 29389626 -60114927 + L2 LINE L2 2582 3055 -217 817 310 43 0 chr17 29389948 29390180 -60114373 - MIR SINE MIR -3 259 18 740 197 0 0 chr17 29390194 29390316 -60114237 + FLAM_A SINE Alu 1 122 -11 1056 209 17 51 chr17 29390443 29390678 -60113875 + AluJo SINE Alu 3 229 -83 225 0 0 0 chr17 29390691 29390716 -60113837 + (A)n Simple_repeat Simple_repeat 1 25 0 292 289 62 10 chr17 29390760 29390857 -60113696 - L3 LINE CR1 -835 742 641 1776 171 23 3 chr17 29391660 29391959 -60112594 + AluJo SINE Alu 2 306 -6 2127 120 7 0 chr17 29392010 29392302 -60112251 + AluSx SINE Alu 1 294 -18 1012 103 0 27 chr17 29392955 29393139 -60111414 + (TA)n Simple_repeat Simple_repeat 2 180 0 685 113 57 0 chr17 29393745 29393851 -60110702 + FRAM SINE Alu 37 148 -28 275 298 11 0 chr17 29393903 29393997 -60110556 - L1ME LINE L1 -352 5769 5675 344 223 85 23 chr17 29394189 29394319 -60110234 - L1ME LINE L1 -770 5408 5271 850 147 0 29 chr17 29394319 29394455 -60110098 + AluJb SINE Alu 1 132 -180 1802 205 69 5 chr17 29394788 29395193 -60109360 - MER63B DNA MER1_type -5 431 1 26 0 0 0 chr17 29395638 29395664 -60108889 + AT_rich Low_complexity Low_complexity 1 26 0 1959 157 0 0 chr17 29395748 29396047 -60108506 - AluJb SINE Alu -13 299 1 712 191 22 77 chr17 29396103 29396286 -60108267 - FAM SINE Alu -2 173 1 2564 65 0 0 chr17 29397636 29397943 -60106610 + AluSp SINE Alu 1 307 -6 548 290 0 0 chr17 29398481 29398605 -60105948 + MIR3 SINE MIR 62 185 -23 585 252 85 27 chr17 29398661 29398919 -60105634 + L1ME4a LINE L1 5841 6113 -8 240 188 29 43 chr17 29399177 29399246 -60105307 - MIR SINE MIR -21 241 174 1157 189 9 44 chr17 29399246 29399474 -60105079 + AluJo SINE Alu 1 220 -92 2319 102 0 0 chr17 29399502 29399805 -60104748 + AluSc SINE Alu 3 305 -4 443 262 63 24 chr17 29399805 29399931 -60104622 - MIR SINE MIR -79 183 53 721 210 114 30 chr17 29399940 29400107 -60104446 - AluJo SINE Alu -131 181 1 250 319 115 9 chr17 29401702 29401815 -60102738 + MLT1K LTR MaLR 122 246 -342 992 145 0 7 chr17 29401815 29401967 -60102586 + AluJo SINE Alu 1 151 -161 1340 176 55 3 chr17 29402028 29402317 -60102236 + MER33 DNA MER1_type 21 324 0 28 0 0 0 chr17 29402615 29402643 -60101910 + AT_rich Low_complexity Low_complexity 1 28 0 466 265 20 0 chr17 29403084 29403186 -60101367 - MIR SINE MIR -66 142 39 2319 78 3 0 chr17 29403234 29403527 -60101026 + AluSc SINE Alu 1 294 -15 279 0 0 0 chr17 29403582 29403613 -60100940 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 29403631 29403652 -60100901 + AT_rich Low_complexity Low_complexity 1 21 0 1544 142 116 25 chr17 29403793 29404068 -60100485 - AluJb SINE Alu -12 300 1 619 215 49 0 chr17 29404337 29404481 -60100072 - MER106B DNA MER1_type -7 1052 902 244 309 204 73 chr17 29404574 29404888 -60099665 + L2 LINE L2 2918 3272 0 2036 122 11 0 chr17 29404904 29405190 -60099363 - AluSq SINE Alu -24 289 1 183 315 72 27 chr17 29405302 29405413 -60099140 + L2 LINE L2 3149 3264 -8 850 188 74 0 chr17 29407683 29407859 -60096694 - MIR SINE MIR 0 262 74 842 120 60 0 chr17 29409388 29409521 -60095032 + MLT1B LTR MaLR 204 344 -46 315 265 39 20 chr17 29409566 29409668 -60094885 - L2 LINE L2 -40 3273 3170 28 0 0 0 chr17 29409875 29409903 -60094650 + AT_rich Low_complexity Low_complexity 1 28 0 212 175 0 0 chr17 29411604 29411644 -60092909 + (CTG)n Simple_repeat Simple_repeat 1 40 0 204 40 0 0 chr17 29411749 29411774 -60092779 + (TGG)n Simple_repeat Simple_repeat 2 26 0 189 214 0 0 chr17 29412044 29412086 -60092467 + A-rich Low_complexity Low_complexity 1 42 0 245 323 0 0 chr17 29412962 29413061 -60091492 + C-rich Low_complexity Low_complexity 5 103 0 * 288 253 0 0 chr17 29412990 29413077 -60091476 + (CCG)n Simple_repeat Simple_repeat 1 87 0 241 279 0 0 chr17 29413393 29413454 -60091099 + T-rich Low_complexity Low_complexity 1 61 0 1621 167 16 23 chr17 29414113 29414419 -60090134 - AluJo SINE Alu -8 304 1 204 227 15 61 chr17 29414573 29414639 -60089914 + L2 LINE L2 2444 2506 -808 1442 120 18 5 chr17 29414649 29414866 -60089687 - AluJb SINE Alu -7 305 86 1368 173 65 0 chr17 29415043 29415320 -60089233 + AluJb SINE Alu 1 295 -17 351 319 158 34 chr17 29415333 29415754 -60088799 + L2 LINE L2 2794 3272 0 508 279 151 0 chr17 29415761 29415933 -60088620 + MIR SINE MIR 49 246 -16 544 246 43 22 chr17 29416020 29416158 -60088395 + MER5A DNA MER1_type 47 187 -2 185 298 96 43 chr17 29416171 29416265 -60088288 + L2 LINE L2 3215 3313 0 253 250 18 0 chr17 29416304 29416360 -60088193 - L2 LINE L2 0 3272 3216 2379 71 0 0 chr17 29416427 29416724 -60087829 - AluY SINE Alu -14 297 1 752 80 0 0 chr17 29416824 29416924 -60087629 + AluY SINE Alu 205 304 -7 623 202 0 0 chr17 29416925 29417039 -60087514 - MER47A DNA MER2_type -252 114 1 370 176 114 79 chr17 29417087 29417336 -60087217 + Charlie7 DNA MER1_type 7 2612 0 7091 30 5 0 chr17 29417364 29418207 -60086346 - L1PA4 LINE L1 -1044 5102 4256 7613 36 0 1 chr17 29418207 29419275 -60085278 + L1PA4 LINE L1 5085 6151 -4 358 145 92 0 chr17 29419294 29419370 -60085183 - MER3 DNA MER1_type 0 2585 2503 1856 155 3 19 chr17 29419370 29419687 -60084866 + AluJb SINE Alu 1 312 0 356 161 0 0 chr17 29419689 29419745 -60084808 - MER3 DNA MER1_type -117 92 37 601 254 102 20 chr17 29419745 29419942 -60084611 + MIR SINE MIR 50 262 0 330 241 36 12 chr17 29420404 29420487 -60084066 - MIR SINE MIR -118 144 60 1983 73 0 8 chr17 29420943 29421204 -60083349 - AluY SINE Alu -52 259 1 2162 93 0 0 chr17 29421213 29421502 -60083051 - AluSg SINE Alu -21 289 1 2096 98 0 3 chr17 29421544 29421830 -60082723 - AluSx SINE Alu -1 311 27 731 105 19 9 chr17 29421931 29422064 -60082489 + AluSg/x SINE Alu 183 310 0 848 178 48 0 chr17 29422214 29422360 -60082193 - FRAM SINE Alu -12 154 2 301 290 19 19 chr17 29422580 29422687 -60081866 + MIR SINE MIR 40 146 -116 660 135 0 57 chr17 29423270 29423411 -60081142 - SVA Other Other -791 595 463 1564 168 23 30 chr17 29423411 29423714 -60080839 - AluJo SINE Alu -11 301 1 1344 83 11 0 chr17 29423882 29424063 -60080490 - AluSp SINE Alu -120 193 11 254 229 14 29 chr17 29424074 29424144 -60080409 + Tigger2 DNA MER2_type 12 80 -2638 * 1977 142 39 18 chr17 29424138 29424469 -60080084 + Tigger2 DNA MER2_type 225 562 -2156 183 156 0 0 chr17 29424469 29424501 -60080052 + CT-rich Low_complexity Low_complexity 1 32 0 1978 138 7 0 chr17 29424501 29424806 -60079747 - AluSx SINE Alu -5 307 1 282 138 0 0 chr17 29424852 29424910 -60079643 + (T)n Simple_repeat Simple_repeat 1 58 0 289 295 98 54 chr17 29425909 29426245 -60078308 - L1MC5 LINE L1 -60 7901 7551 1237 125 0 0 chr17 29426299 29426475 -60078078 - AluSg/x SINE Alu -11 299 124 1845 146 6 19 chr17 29426475 29426791 -60077762 - AluSx SINE Alu 0 312 1 259 330 30 10 chr17 29426907 29427007 -60077546 + Tigger8 DNA MER2_type 522 623 -43 254 155 121 0 chr17 29427830 29427888 -60076665 - AluSp/q SINE Alu -8 295 231 1715 133 0 4 chr17 29427916 29428165 -60076388 - AluSx SINE Alu -64 248 1 1932 161 0 0 chr17 29428663 29428973 -60075580 + AluSx SINE Alu 1 310 -2 249 326 11 0 chr17 29428983 29429072 -60075481 - L3 LINE CR1 -352 1225 1136 342 61 0 0 chr17 29429393 29429442 -60075111 + (T)n Simple_repeat Simple_repeat 1 49 0 1646 144 3 67 chr17 29429657 29429837 -60074716 - AluJo SINE Alu -10 302 149 2019 134 3 3 chr17 29429837 29430136 -60074417 - AluSc SINE Alu -10 299 1 1646 144 3 67 chr17 29430136 29430268 -60074285 - AluJo SINE Alu -163 149 10 2158 116 6 0 chr17 29430343 29430654 -60073899 - AluSq SINE Alu 0 313 1 363 340 70 0 chr17 29430654 29430839 -60073714 - LTR67 LTR ERVL -5 552 355 536 120 32 80 chr17 29430900 29430936 -60073617 - MLT2B1 LTR ERVL 0 520 484 216 0 0 0 chr17 29430936 29430960 -60073593 + (CA)n Simple_repeat Simple_repeat 2 25 0 536 120 32 80 chr17 29430960 29431048 -60073505 - MLT2B1 LTR ERVL -36 484 402 1430 107 44 35 chr17 29431048 29431365 -60073188 + SVA Other Other 467 786 -600 282 102 51 51 chr17 29432175 29432234 -60072319 - L1M4 LINE L1 -688 5486 5428 353 137 0 0 chr17 29432234 29432285 -60072268 + U6 snRNA snRNA 1 51 -56 1127 147 20 10 chr17 29432285 29432551 -60072002 - L1M4 LINE L1 -737 5443 5176 317 324 110 0 chr17 29433481 29433670 -60070883 + MIR SINE MIR 33 241 -21 527 239 51 14 chr17 29434443 29434581 -60069972 - MIR3 SINE MIR -23 185 43 508 289 29 15 chr17 29434609 29434839 -60069714 - MIR SINE MIR -9 253 18 2041 120 0 10 chr17 29435244 29435545 -60069008 + AluSx SINE Alu 3 300 -12 515 238 16 24 chr17 29435697 29435823 -60068730 - MIR SINE MIR -118 144 20 282 233 39 19 chr17 29436011 29436114 -60068439 + (TATG)n Simple_repeat Simple_repeat 1 105 0 472 167 51 0 chr17 29436214 29436292 -60068261 - MER81 DNA DNA -32 82 1 1733 226 106 40 chr17 29436292 29436791 -60067762 + MER90 LTR ERV1 37 568 -7 2015 143 0 16 chr17 29436879 29437193 -60067360 + AluSx SINE Alu 1 309 -3 267 295 172 25 chr17 29437194 29437316 -60067237 - L2 LINE L2 -17 3255 3116 1964 108 0 69 chr17 29437614 29437948 -60066605 + AluSx SINE Alu 1 311 -1 1458 115 0 5 chr17 29438065 29438283 -60066270 + AluSq SINE Alu 86 302 -11 242 299 35 14 chr17 29438857 29438932 -60065621 + L1ME LINE L1 5257 5329 -817 2415 59 0 0 chr17 29438932 29439237 -60065316 + AluY SINE Alu 1 305 -6 242 299 35 14 chr17 29439237 29439305 -60065248 + L1ME LINE L1 5329 5403 -743 344 254 92 23 chr17 29439335 29439465 -60065088 + L1ME LINE L1 5469 5607 -514 1815 150 7 29 chr17 29439507 29439813 -60064740 - AluSx SINE Alu -13 299 1 201 39 0 0 chr17 29439824 29439850 -60064703 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 9742 30 3 156 chr17 29439850 29441458 -60063095 - SVA Other Other -23 1363 1 467 164 0 0 chr17 29441633 29441706 -60062847 - L1M3 LINE L1 -500 5683 5611 743 174 0 29 chr17 29441706 29441844 -60062709 - FRAM SINE Alu -8 168 35 908 114 0 0 chr17 29441845 29441976 -60062577 - L1M3 LINE L1 -565 5606 5476 2067 104 0 49 chr17 29442006 29442334 -60062219 - AluSx SINE Alu 0 312 1 1945 148 0 3 chr17 29442355 29442666 -60061887 - AluSg SINE Alu 0 310 1 299 160 0 0 chr17 29442666 29442716 -60061837 - L1M3 LINE L1 -680 5491 5442 1529 180 221 25 chr17 29442758 29443197 -60061356 + LTR64 LTR ERVK 22 546 -12 1538 183 12 72 chr17 29443200 29443419 -60061134 - L1M3 LINE L1 -729 5449 5218 1852 129 3 7 chr17 29443419 29443706 -60060847 - AluSx SINE Alu -26 286 1 1538 183 12 72 chr17 29443706 29443818 -60060735 - L1M3 LINE L1 -960 5218 5101 1797 133 9 25 chr17 29443818 29444135 -60060418 - AluJb SINE Alu 0 312 1 1538 183 12 72 chr17 29444135 29444355 -60060198 - L1M3 LINE L1 -1077 5101 4945 911 211 36 10 chr17 29444355 29444549 -60060004 - MER63B DNA MER1_type -237 199 1 2157 112 0 3 chr17 29444762 29445066 -60059487 - AluSq SINE Alu -10 303 1 1033 270 26 45 chr17 29445071 29445156 -60059397 + L1MEc LINE L1 1476 1561 -4835 1142 162 0 0 chr17 29445156 29445329 -60059224 - FAM SINE Alu -2 173 1 1033 270 26 45 chr17 29445329 29445624 -60058929 + L1MEc LINE L1 1561 1849 -4547 1980 108 0 48 chr17 29446434 29446748 -60057805 + AluSx SINE Alu 1 299 -13 2392 74 0 0 chr17 29446957 29447267 -60057286 + AluY SINE Alu 1 310 -1 1846 163 7 0 chr17 29447279 29447585 -60056968 + AluJb SINE Alu 1 308 -4 416 119 0 0 chr17 29447901 29447968 -60056585 - Alu SINE Alu -6 306 240 542 139 59 0 chr17 29448078 29448179 -60056374 - MER82 DNA MER2_type -182 471 365 1615 153 42 39 chr17 29448179 29448486 -60056067 - AluJb SINE Alu -4 308 1 294 274 24 0 chr17 29448487 29448571 -60055982 + LTR67 LTR ERVL 460 545 -12 185 282 146 0 chr17 29448647 29448757 -60055796 + L2 LINE L2 1634 1759 -1555 412 185 85 114 chr17 29448816 29449027 -60055526 + L1MEd LINE L1 940 1144 -4975 316 283 81 67 chr17 29449564 29449749 -60054804 - L1MCa LINE L1 -4233 2193 2003 1954 120 7 0 chr17 29449749 29450032 -60054521 - AluSx SINE Alu -27 285 1 316 283 81 67 chr17 29450032 29450069 -60054484 - L1MCa LINE L1 -4423 2003 1968 3479 244 115 44 chr17 29450091 29450732 -60053821 + HAL1 LINE L1 126 720 -1787 2301 89 3 0 chr17 29450732 29451035 -60053518 - AluSp SINE Alu -9 304 1 3479 244 115 44 chr17 29451035 29451208 -60053345 + HAL1 LINE L1 720 879 -1628 815 137 0 23 chr17 29451208 29451339 -60053214 + FLAM_A SINE Alu 5 132 -1 3479 244 115 44 chr17 29451339 29451890 -60052663 + HAL1 LINE L1 879 1589 -918 1883 117 0 34 chr17 29451891 29452209 -60052344 - AluSq SINE Alu 0 313 1 494 196 70 19 chr17 29452317 29452475 -60052078 - HAL1 LINE L1 -317 2190 2025 373 97 0 5 chr17 29452577 29452638 -60051915 - Alu SINE Alu -259 44 1 262 322 98 87 chr17 29452681 29453060 -60051493 + L2 LINE L2 2859 3241 -31 464 283 50 6 chr17 29453065 29453224 -60051329 + MER117 DNA MER1_type 6 171 -26 275 233 123 0 chr17 29453631 29453704 -60050849 + MIR SINE MIR 63 144 -64 194 158 0 53 chr17 29453704 29453742 -60050811 + MIR SINE MIR 111 146 -62 366 327 94 69 chr17 29454088 29454492 -60050061 - L2 LINE L2 -3 3269 2856 459 181 24 27 chr17 29454555 29454657 -60049896 - L1MEc LINE L1 -3964 3641 3499 736 191 0 0 chr17 29454657 29454783 -60049770 - FLAM_C SINE Alu -7 126 1 459 181 24 27 chr17 29454783 29454817 -60049736 - L1MEc LINE L1 -4106 3499 3466 2000 133 0 0 chr17 29454973 29455266 -60049287 + AluSx SINE Alu 1 293 -19 186 167 0 0 chr17 29455347 29455383 -60049170 + (TA)n Simple_repeat Simple_repeat 2 37 0 24 32 0 0 chr17 29455446 29455477 -60049076 + AT_rich Low_complexity Low_complexity 1 31 0 625 235 132 58 chr17 29456098 29456324 -60048229 - MIR SINE MIR 0 262 15 849 217 63 100 chr17 29456324 29456674 -60047879 + MER102b DNA MER1_type 4 340 -1 625 235 132 58 chr17 29456674 29456690 -60047863 - MIR SINE MIR -247 15 2 2375 104 0 7 chr17 29456994 29457303 -60047250 - AluSx SINE Alu 0 312 6 2492 90 0 3 chr17 29458225 29458535 -60046018 - AluSg SINE Alu -1 309 1 235 286 44 11 chr17 29458548 29458639 -60045914 + Tigger8 DNA MER2_type 214 307 -359 547 131 131 0 chr17 29459109 29459216 -60045337 + AluSq/x SINE Alu 11 131 -181 21 0 0 0 chr17 29459644 29459665 -60044888 + AT_rich Low_complexity Low_complexity 1 21 0 1999 159 3 0 chr17 29459671 29459966 -60044587 + AluJb SINE Alu 1 296 -16 1342 240 115 18 chr17 29460066 29460612 -60043941 + L1MEc LINE L1 1885 2483 -3913 825 186 0 0 chr17 29460614 29460743 -60043810 + FLAM_C SINE Alu 1 129 -14 22 43 0 21 chr17 29460743 29460769 -60043784 + AT_rich Low_complexity Low_complexity 1 27 -19 553 137 128 20 chr17 29460769 29460871 -60043682 - FLAM_C SINE Alu -17 116 4 22 43 0 21 chr17 29460871 29460891 -60043662 + AT_rich Low_complexity Low_complexity 27 46 0 411 242 16 8 chr17 29460894 29461018 -60043535 + L1MEc LINE L1 2431 2555 -3660 1900 117 0 4 chr17 29461020 29461269 -60043284 + AluSx SINE Alu 1 248 -64 1106 210 19 0 chr17 29461311 29461568 -60042985 + L1MEc LINE L1 2547 2808 -3407 309 283 43 0 chr17 29461610 29461748 -60042805 + L1MEc LINE L1 3038 3181 -3034 1028 296 74 63 chr17 29461758 29462573 -60041980 + ERVL LTR ERVL 4917 5740 -24 7819 153 19 11 chr17 29462773 29464278 -60040275 - L1PA14 LINE L1 -2 6159 4632 2486 87 0 7 chr17 29464278 29464587 -60039966 - AluSp SINE Alu -6 307 1 7819 153 19 11 chr17 29464587 29465333 -60039220 - L1PA14 LINE L1 -1529 4632 3893 265 292 0 0 chr17 29465349 29465397 -60039156 + MLT2B3 LTR ERVL 169 219 -301 191 59 0 29 chr17 29465397 29465431 -60039122 + (CAAAA)n Simple_repeat Simple_repeat 4 36 0 265 292 0 0 chr17 29465431 29465447 -60039106 + MLT2B3 LTR ERVL 218 233 -287 * 4462 167 28 51 chr17 29465433 29465784 -60038769 - MER21B LTR ERV1 -19 844 486 183 80 0 0 chr17 29465784 29465809 -60038744 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4462 167 28 51 chr17 29465809 29465854 -60038699 - MER21B LTR ERV1 -377 486 441 1745 177 0 3 chr17 29465854 29466137 -60038416 + AluJb SINE Alu 1 282 -30 182 61 0 30 chr17 29466137 29466170 -60038383 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 4462 167 28 51 chr17 29466170 29466635 -60037918 - MER21B LTR ERV1 -420 443 1 758 227 10 63 chr17 29466652 29466859 -60037694 + MLT2B3 LTR ERVL 225 420 -134 1001 191 0 6 chr17 29466861 29467039 -60037514 - MER4E LTR ERV1 -1 778 602 2279 108 20 0 chr17 29467047 29467352 -60037201 + AluSx SINE Alu 1 311 -1 1132 166 0 20 chr17 29467354 29467553 -60037000 - MER4E LTR ERV1 -584 195 1 287 156 0 0 chr17 29467553 29467598 -60036955 + MLT2B2 LTR ERVL 368 412 -103 7216 56 6 45 chr17 29467606 29468599 -60035954 - SVA Other Other 0 1386 433 1004 90 20 30 chr17 29468612 29468813 -60035740 - SVA Other Other -592 794 596 198 0 0 0 chr17 29468930 29468952 -60035601 + (A)n Simple_repeat Simple_repeat 1 22 0 1956 140 13 36 chr17 29469592 29469726 -60034827 + AluSx SINE Alu 2 138 -174 2308 105 13 0 chr17 29469726 29470030 -60034523 + AluSx SINE Alu 1 308 -4 1956 140 13 36 chr17 29470030 29470203 -60034350 + AluSx SINE Alu 138 302 -10 2380 75 3 28 chr17 29470205 29470548 -60034005 + AluY SINE Alu 1 311 0 349 234 107 32 chr17 29471186 29471447 -60033106 + L1ME1 LINE L1 5667 5947 -219 23 33 0 0 chr17 29471642 29471672 -60032881 + AT_rich Low_complexity Low_complexity 1 30 0 2445 82 0 0 chr17 29471672 29471964 -60032589 - AluSx SINE Alu -20 292 1 1428 154 58 8 chr17 29471990 29472230 -60032323 - AluJb SINE Alu -60 252 1 2084 107 46 0 chr17 29472256 29472536 -60032017 + AluSg SINE Alu 1 293 -17 189 171 0 0 chr17 29472867 29472902 -60031651 + MIR SINE MIR 91 125 -83 1116 171 0 102 chr17 29473516 29473663 -60030890 + AluJb SINE Alu 1 115 -197 2435 90 0 3 chr17 29473663 29473964 -60030589 + AluSq SINE Alu 2 301 -12 1116 171 0 102 chr17 29473964 29474061 -60030492 + AluJb SINE Alu 115 220 -92 405 193 43 22 chr17 29474061 29474225 -60030328 + AluJ SINE Alu 86 302 -10 182 321 46 18 chr17 29474252 29474313 -60030240 + MIR SINE MIR 145 212 -50 2299 98 0 7 chr17 29474313 29474618 -60029935 + AluY SINE Alu 1 303 -8 182 321 46 18 chr17 29474618 29474665 -60029888 + MIR SINE MIR 212 256 -6 829 143 0 0 chr17 29475762 29475881 -60028672 + AluJb SINE Alu 14 132 -180 1770 67 5 0 chr17 29475884 29476093 -60028460 + AluSp SINE Alu 60 269 -44 2498 87 0 3 chr17 29476196 29476506 -60028047 - AluSq SINE Alu -4 309 1 495 306 34 0 chr17 29476656 29476803 -60027750 + MIR SINE MIR 4 155 -107 1155 277 100 32 chr17 29476808 29476917 -60027636 - L2 LINE L2 -1 3312 3212 2391 99 13 0 chr17 29476917 29477221 -60027332 + AluSx SINE Alu 1 308 -4 1155 277 100 32 chr17 29477221 29477657 -60026896 - L2 LINE L2 -101 3212 2735 810 279 67 39 chr17 29477662 29478200 -60026353 - L1MC5 LINE L1 -262 7699 7260 932 175 0 0 chr17 29478273 29478427 -60026126 - AluJo/FRAM SINE Alu -6 306 153 2094 144 3 0 chr17 29478428 29478727 -60025826 + AluSx SINE Alu 1 300 -12 2220 110 0 3 chr17 29478734 29479025 -60025528 + AluSx SINE Alu 5 294 -18 2321 89 0 10 chr17 29479028 29479321 -60025232 + AluSg SINE Alu 1 290 -20 1154 103 29 29 chr17 29479324 29479498 -60025055 + AluSg/x SINE Alu 137 310 -2 2229 112 0 0 chr17 29479651 29479938 -60024615 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 29479938 29479969 -60024584 + AT_rich Low_complexity Low_complexity 1 31 0 969 177 25 20 chr17 29480025 29480089 -60024464 - MER3 DNA MER1_type 0 209 147 2133 74 70 0 chr17 29480089 29480359 -60024194 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 29480359 29480387 -60024166 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 969 177 25 20 chr17 29480387 29480400 -60024153 - MER3 DNA MER1_type -62 147 136 2434 81 0 3 chr17 29480400 29480696 -60023857 + AluSx SINE Alu 1 295 -17 969 177 25 20 chr17 29480696 29480819 -60023734 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 29482345 29482366 -60022187 + GC_rich Low_complexity Low_complexity 1 21 0 2422 81 7 0 chr17 29482889 29483186 -60021367 - AluSp SINE Alu -14 299 1 2229 101 0 3 chr17 29483439 29483727 -60020826 + AluSx SINE Alu 1 287 -25 3444 155 36 12 chr17 29484600 29485270 -60019283 + L1MB2 LINE L1 5478 6163 -8 223 234 0 0 chr17 29485657 29485704 -60018849 - L2 LINE L2 0 3313 3267 2260 82 0 7 chr17 29486167 29486480 -60018073 + AluSc SINE Alu 1 311 0 233 287 129 30 chr17 29487641 29487742 -60016811 + MIR3 SINE MIR 11 121 -87 207 0 0 0 chr17 29487814 29487837 -60016716 + (T)n Simple_repeat Simple_repeat 1 23 0 262 304 54 16 chr17 29488541 29488725 -60015828 + L2 LINE L2 2902 3092 -180 311 295 201 0 chr17 29488744 29488893 -60015660 + MIR SINE MIR 82 260 -2 190 333 70 0 chr17 29488923 29488980 -60015573 + L2 LINE L2 3241 3301 -12 437 62 15 0 chr17 29488983 29489048 -60015505 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 216 278 156 11 chr17 29490667 29490757 -60013796 - MIR SINE MIR -76 186 84 526 264 35 7 chr17 29490757 29490901 -60013652 - MER69A DNA AcHobo -3 174 27 235 224 58 0 chr17 29491325 29491410 -60013143 - MIR SINE MIR -76 132 41 951 274 193 41 chr17 29491538 29492400 -60012153 + L2 LINE L2 1584 2576 -738 845 125 0 29 chr17 29492444 29492580 -60011973 + FLAM_C SINE Alu 1 132 -1 588 277 167 16 chr17 29492584 29493031 -60011522 + L2 LINE L2 2736 3301 -12 2271 115 0 10 chr17 29493032 29493336 -60011217 + AluSx SINE Alu 1 301 -11 2658 52 0 3 chr17 29493344 29493650 -60010903 - AluY SINE Alu -6 305 1 474 264 30 100 chr17 29493819 29493925 -60010628 - MIR SINE MIR 0 262 179 2556 73 0 0 chr17 29493925 29494225 -60010328 + AluSx SINE Alu 1 300 -12 474 264 30 100 chr17 29494225 29494349 -60010204 - MIR SINE MIR -83 179 48 331 358 85 20 chr17 29494502 29494795 -60009758 - L2 LINE L2 -70 3202 2891 314 284 155 10 chr17 29495065 29495113 -60009440 - L2 LINE L2 -234 3079 3039 1741 139 19 4 chr17 29495113 29495372 -60009181 + AluJo SINE Alu 29 291 -21 314 284 155 10 chr17 29495372 29495517 -60009036 - L2 LINE L2 -274 3039 2858 1430 190 10 68 chr17 29495887 29496022 -60008531 + AluJb SINE Alu 1 142 -170 2333 99 3 0 chr17 29496022 29496316 -60008237 + AluSx SINE Alu 1 295 -17 1430 190 10 68 chr17 29496316 29496490 -60008063 + AluJb SINE Alu 142 292 -20 240 276 82 20 chr17 29496646 29496838 -60007715 + MIR SINE MIR 1 248 -14 1089 194 92 46 chr17 29497540 29497910 -60006643 - MER89 LTR ERV1 -72 487 1 525 175 10 0 chr17 29497979 29498076 -60006477 - FLAM_A SINE Alu -12 130 33 1849 145 11 11 chr17 29498154 29498335 -60006218 - AluJb SINE Alu 0 311 128 291 28 0 0 chr17 29498335 29498371 -60006182 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1849 145 11 11 chr17 29498371 29498500 -60006053 - AluJb SINE Alu -182 129 1 665 135 57 35 chr17 29498503 29498644 -60005909 + Charlie4 DNA MER1_type 1817 1960 -1 226 250 16 105 chr17 29498722 29498846 -60005707 + L2 LINE L2 2694 2806 -508 2002 136 0 30 chr17 29499494 29499795 -60004758 + AluJo SINE Alu 1 292 -20 341 293 40 0 chr17 29499819 29499918 -60004635 - MIR SINE MIR -58 204 102 279 83 133 17 chr17 29499963 29500023 -60004530 - MIR SINE MIR -148 114 48 622 306 59 12 chr17 29500436 29500955 -60003598 - L2 LINE L2 -223 3049 2500 753 242 97 74 chr17 29501822 29501853 -60002700 - Charlie4a DNA MER1_type -1515 446 417 1677 161 9 64 chr17 29501853 29502182 -60002371 + AluJo SINE Alu 1 311 -1 753 242 97 74 chr17 29502182 29502584 -60001969 - Charlie4a DNA MER1_type -1544 417 3 1991 144 0 13 chr17 29502940 29503246 -60001307 - AluJb SINE Alu -10 302 1 332 290 71 44 chr17 29503484 29503667 -60000886 + MIR SINE MIR 59 246 -16 284 207 126 11 chr17 29504007 29504094 -60000459 - MER91C DNA MER1_type -7 133 37 285 194 140 65 chr17 29504120 29504213 -60000340 + MIR SINE MIR 45 144 -118 212 205 72 48 chr17 29504762 29504845 -59999708 + MER91C DNA MER1_type 31 115 -25 994 156 56 0 chr17 29505797 29505976 -59998577 - MER5A DNA MER1_type 0 189 1 2163 122 0 0 chr17 29506141 29506429 -59998124 + AluJb SINE Alu 1 288 -24 21 0 0 0 chr17 29506430 29506451 -59998102 + AT_rich Low_complexity Low_complexity 1 21 0 297 233 0 0 chr17 29507219 29507279 -59997274 - MER81 DNA DNA -54 60 1 223 211 135 22 chr17 29508167 29508279 -59996274 - MIR SINE MIR -63 145 30 560 331 98 30 chr17 29508343 29508791 -59995762 - L2 LINE L2 -15 3257 2782 337 342 20 0 chr17 29508794 29508946 -59995607 + MER117 DNA MER1_type 1 155 -42 230 337 41 41 chr17 29509133 29509231 -59995322 - L2 LINE L2 -46 3226 3129 208 278 56 56 chr17 29510324 29510432 -59994121 - MIR SINE MIR -59 149 42 221 259 17 0 chr17 29513607 29513665 -59990888 + (TG)n Simple_repeat Simple_repeat 1 59 0 207 266 127 0 chr17 29515844 29515923 -59988630 + L2 LINE L2 3187 3275 -38 219 247 96 0 chr17 29516037 29516110 -59988443 + MIR3 SINE MIR 81 160 -48 330 310 6 6 chr17 29516709 29516880 -59987673 + (CA)n Simple_repeat Simple_repeat 2 172 0 713 291 62 4 chr17 29518394 29518900 -59985653 - L1P LINE L1 -722 5429 4903 1288 132 35 40 chr17 29518972 29519199 -59985354 + AluJo SINE Alu 74 299 -13 492 294 48 91 chr17 29519254 29519564 -59984989 - L1M4 LINE L1 -1300 4846 4524 680 165 47 24 chr17 29519564 29519691 -59984862 - FLAM_C SINE Alu -3 130 1 492 294 48 91 chr17 29519691 29519905 -59984648 - L1M4 LINE L1 -1622 4524 4363 1840 141 22 22 chr17 29519905 29520217 -59984336 - AluJb SINE Alu 0 312 1 492 294 48 91 chr17 29520217 29520457 -59984096 - L1M4 LINE L1 -1783 4363 4114 617 233 75 0 chr17 29520816 29520975 -59983578 - MIR SINE MIR -14 248 78 339 358 0 39 chr17 29525340 29525595 -59978958 + C-rich Low_complexity Low_complexity 1 245 0 525 204 0 0 chr17 29526420 29526567 -59977986 + (CA)n Simple_repeat Simple_repeat 2 148 0 468 51 0 0 chr17 29526708 29526767 -59977786 + (CA)n Simple_repeat Simple_repeat 2 60 0 210 320 0 40 chr17 29527242 29527317 -59977236 + MIR3 SINE MIR 116 187 -21 193 280 0 67 chr17 29527782 29527857 -59976696 - MIR SINE MIR -70 192 123 572 189 104 0 chr17 29528654 29528760 -59975793 + FLAM_A SINE Alu 4 120 -13 1524 140 0 0 chr17 29529223 29529451 -59975102 + AluSg/x SINE Alu 85 312 0 24 32 0 0 chr17 29529527 29529558 -59974995 + AT_rich Low_complexity Low_complexity 1 31 0 243 259 0 0 chr17 29529584 29529696 -59974857 + (TCCA)n Simple_repeat Simple_repeat 1 112 0 589 238 55 24 chr17 29531094 29531258 -59973295 + MIR SINE MIR 4 172 -90 291 292 0 11 chr17 29534424 29534513 -59970040 - MIR3 SINE MIR -43 165 78 342 236 264 0 chr17 29534941 29535051 -59969502 + MIR3 SINE MIR 27 165 -43 830 225 52 66 chr17 29535062 29535275 -59969278 + MER63A DNA MER1_type 1 210 0 1068 133 13 0 chr17 29535337 29535495 -59969058 + FRAM SINE Alu 1 160 -16 584 251 116 37 chr17 29536139 29536354 -59968199 - MIR SINE MIR 0 262 31 229 163 0 61 chr17 29536503 29536552 -59968001 + MIR SINE MIR 81 126 -82 741 285 24 40 chr17 29537171 29537420 -59967133 - MIR SINE MIR -11 251 7 218 294 29 0 chr17 29537899 29537967 -59966586 + MIR SINE MIR 81 150 -112 473 296 128 5 chr17 29538209 29538412 -59966141 + MIR SINE MIR 21 248 -14 2054 130 7 0 chr17 29538519 29538827 -59965726 + AluSx SINE Alu 1 310 -2 1238 119 0 0 chr17 29538828 29539005 -59965548 + AluSg/x SINE Alu 119 295 -15 558 310 150 0 chr17 29539034 29539260 -59965293 - MIR SINE MIR 0 262 3 341 306 28 28 chr17 29539276 29539420 -59965133 - MIR3 SINE MIR -6 202 59 453 76 0 0 chr17 29539919 29539985 -59964568 + (TC)n Simple_repeat Simple_repeat 1 66 0 325 245 132 19 chr17 29541664 29541770 -59962783 + MIR SINE MIR 79 196 -66 523 304 23 18 chr17 29542101 29542272 -59962281 - MIR SINE MIR -34 228 57 525 210 42 8 chr17 29542336 29542455 -59962098 + MIR3 SINE MIR 77 199 -9 253 244 13 14 chr17 29543195 29543285 -59961268 + MIR SINE MIR 42 131 -77 198 247 32 108 chr17 29545508 29545601 -59958952 + L3 LINE CR1 1487 1572 -5 345 269 19 9 chr17 29546063 29546171 -59958382 + MIR SINE MIR 33 141 -67 1219 90 6 0 chr17 29546182 29546349 -59958204 + L1PA7 LINE L1 5987 6154 0 194 267 160 0 chr17 29546406 29546481 -59958072 + MIR SINE MIR 170 256 -6 635 250 174 1 chr17 29546529 29546724 -59957829 - MIR SINE MIR 0 262 36 195 333 0 0 chr17 29547182 29547245 -59957308 - MIR SINE MIR -82 126 64 434 317 48 0 chr17 29548577 29548722 -59955831 + MIR3 SINE MIR 38 189 -19 2091 105 27 3 chr17 29551620 29551916 -59952637 + AluSx SINE Alu 1 303 -9 469 325 128 5 chr17 29552464 29552652 -59951901 - MIR SINE MIR -10 252 42 297 245 106 66 chr17 29553029 29553180 -59951373 - MIR3 SINE MIR -31 177 21 400 136 0 0 chr17 29554496 29554561 -59949992 + Tigger5 DNA MER2_type 14 78 -2245 383 155 14 0 chr17 29554561 29554632 -59949921 - Tigger5 DNA MER2_type -3 2320 2249 466 156 0 0 chr17 29554633 29554710 -59949843 + Tigger5 DNA MER2_type 2247 2323 0 2252 89 0 13 chr17 29555725 29556028 -59948525 + AluSx SINE Alu 1 299 -13 2136 128 0 0 chr17 29556041 29556337 -59948216 + AluSx SINE Alu 1 296 -16 306 0 0 0 chr17 29556898 29556932 -59947621 + (TG)n Simple_repeat Simple_repeat 1 34 0 297 0 0 0 chr17 29556931 29556964 -59947589 + (GA)n Simple_repeat Simple_repeat 1 33 0 * 1315 198 0 5 chr17 29557155 29557377 -59947176 - AluJo SINE Alu -91 221 1 847 197 39 30 chr17 29557452 29557685 -59946868 + Charlie4 DNA MER1_type 1 235 -1726 297 0 0 0 chr17 29557687 29558308 -59946245 + (TA)n Simple_repeat Simple_repeat 1 621 0 1696 149 34 40 chr17 29557717 29557985 -59946568 - MER7A DNA MER2_type -2693 345 77 2052 135 0 3 chr17 29557985 29558274 -59946279 + AluSx SINE Alu 1 288 -24 297 0 0 0 chr17 29558275 29558308 -59946245 + (TA)n Simple_repeat Simple_repeat 1 33 0 1696 149 34 40 chr17 29558308 29558386 -59946167 - MER7A DNA MER2_type -2960 78 1 1534 141 98 14 chr17 29558422 29558699 -59945854 + MER2 DNA MER2_type 29 328 -17 2260 98 0 0 chr17 29558740 29559017 -59945536 + AluSc SINE Alu 1 277 -32 360 0 0 0 chr17 29559019 29559059 -59945494 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 1747 143 33 18 chr17 29559168 29559440 -59945113 + AluJo SINE Alu 21 296 -16 2109 78 6 90 chr17 29559707 29560039 -59944514 + AluSx SINE Alu 1 304 -8 275 348 99 25 chr17 29560932 29561374 -59943179 + L2 LINE L2 2183 2657 -657 750 187 157 10 chr17 29561391 29561589 -59942964 + MIR SINE MIR 34 260 -2 461 169 0 0 chr17 29561754 29561825 -59942728 + AluJ/FLAM SINE Alu 14 84 -228 186 133 0 0 chr17 29561839 29561869 -59942684 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 238 294 135 31 chr17 29561878 29562041 -59942512 + L2 LINE L2 2920 3099 -173 216 162 0 0 chr17 29564097 29564134 -59940419 + C-rich Low_complexity Low_complexity 4 40 0 210 306 50 41 chr17 29566482 29566603 -59937950 - L3b LINE CR1 -168 1415 1294 753 212 69 5 chr17 29567654 29567843 -59936710 - MIR SINE MIR -48 214 14 23 0 0 0 chr17 29568791 29568814 -59935739 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 29568821 29568842 -59935711 + GC_rich Low_complexity Low_complexity 1 21 0 375 287 189 10 chr17 29569052 29569348 -59935205 + L2 LINE L2 2953 3301 -12 621 298 77 10 chr17 29569559 29569783 -59934770 - MIR SINE MIR -6 256 18 333 0 0 0 chr17 29569792 29569829 -59934724 + (CA)n Simple_repeat Simple_repeat 2 38 0 588 241 36 24 chr17 29571603 29571769 -59932784 - MER117 DNA MER1_type -19 178 11 2351 88 0 3 chr17 29571841 29572136 -59932417 + AluSg1 SINE Alu 1 294 -15 190 205 0 0 chr17 29573164 29573203 -59931350 + MIR SINE MIR 46 84 -124 400 318 112 33 chr17 29573361 29573691 -59930862 + L2 LINE L2 2618 2973 -341 222 217 0 0 chr17 29573707 29573753 -59930800 + L2 LINE L2 3227 3272 0 1831 185 10 3 chr17 29574181 29574473 -59930080 + AluJo SINE Alu 4 297 -15 2336 87 11 0 chr17 29575141 29575427 -59929126 - AluSc SINE Alu -20 289 1 1050 108 7 0 chr17 29575506 29575645 -59928908 + AluSc SINE Alu 2 141 -168 1780 104 4 0 chr17 29575645 29575875 -59928678 + AluSc SINE Alu 72 302 -7 1931 143 13 36 chr17 29576515 29576649 -59927904 + AluSx SINE Alu 2 138 -174 2308 105 13 0 chr17 29576649 29576953 -59927600 + AluSx SINE Alu 1 308 -4 1931 143 13 36 chr17 29576953 29577126 -59927427 + AluSx SINE Alu 138 302 -10 2420 77 3 10 chr17 29577128 29577470 -59927083 + AluY SINE Alu 1 311 0 349 234 107 32 chr17 29578108 29578369 -59926184 + L1ME1 LINE L1 5667 5947 -219 23 33 0 0 chr17 29578564 29578594 -59925959 + AT_rich Low_complexity Low_complexity 1 30 0 2445 82 0 0 chr17 29578594 29578886 -59925667 - AluSx SINE Alu -20 292 1 1428 154 58 8 chr17 29578912 29579152 -59925401 - AluJb SINE Alu -60 252 1 2084 107 46 0 chr17 29579178 29579458 -59925095 + AluSg SINE Alu 1 293 -17 189 171 0 0 chr17 29579789 29579824 -59924729 + MIR SINE MIR 91 125 -83 1865 162 0 38 chr17 29580438 29580585 -59923968 + AluJb SINE Alu 1 131 -181 2446 87 0 3 chr17 29580585 29580885 -59923668 + AluSq SINE Alu 2 300 -13 1865 162 0 38 chr17 29580885 29581051 -59923502 + AluJb SINE Alu 131 302 -10 585 271 81 68 chr17 29581054 29581674 -59922879 + L1M4 LINE L1 4032 4659 -1487 1755 149 22 67 chr17 29581760 29581900 -59922653 + AluJo SINE Alu 1 146 -166 2098 127 0 3 chr17 29581900 29582225 -59922328 + AluSx SINE Alu 1 324 0 1755 149 22 67 chr17 29582225 29582398 -59922155 + AluJo SINE Alu 146 301 -11 2262 130 0 9 chr17 29582428 29582743 -59921810 - AluSx SINE Alu 0 312 1 2094 144 3 0 chr17 29582746 29583045 -59921508 - AluSx SINE Alu -12 300 1 932 175 0 0 chr17 29583046 29583200 -59921353 + AluJo/FRAM SINE Alu 153 306 -6 810 281 67 39 chr17 29583273 29583811 -59920742 + L1MC5 LINE L1 7241 7699 -262 1155 278 100 32 chr17 29583818 29584253 -59920300 + L2 LINE L2 2736 3212 -101 2394 96 13 0 chr17 29584253 29584555 -59919998 - AluSx SINE Alu -6 306 1 1155 278 100 32 chr17 29584555 29584664 -59919889 + L2 LINE L2 3212 3312 -1 495 306 34 0 chr17 29584669 29584816 -59919737 - MIR SINE MIR -107 155 4 2468 93 0 3 chr17 29584966 29585277 -59919276 + AluSq SINE Alu 1 310 -3 1988 129 32 29 chr17 29585346 29585655 -59918898 + AluJb SINE Alu 1 310 -2 822 261 115 4 chr17 29585827 29586061 -59918492 + MIR SINE MIR 3 262 0 2377 100 0 0 chr17 29586381 29586692 -59917861 + AluSx SINE Alu 1 311 -1 650 250 82 26 chr17 29588273 29588505 -59916048 + MIR SINE MIR 17 261 -1 204 67 0 0 chr17 29596468 29596498 -59908055 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 208 0 30 30 chr17 29596541 29596574 -59907979 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 601 313 97 60 chr17 29596574 29597143 -59907410 + L2 LINE L2 1782 2371 -943 1148 216 0 0 chr17 29597220 29597438 -59907115 + MER58A DNA MER1_type 5 222 -2 1026 173 13 91 chr17 29599116 29599347 -59905206 - AluJb SINE Alu -15 297 85 207 176 0 0 chr17 29600770 29600804 -59903749 + (CA)n Simple_repeat Simple_repeat 2 35 0 2273 124 3 0 chr17 29602677 29602983 -59901570 - AluSx SINE Alu -5 307 1 643 129 10 0 chr17 29603074 29603175 -59901378 - AluJo SINE Alu -178 134 33 1962 145 0 38 chr17 29603284 29603417 -59901136 + AluJb SINE Alu 1 138 -174 2376 75 7 0 chr17 29603417 29603710 -59900843 + AluSp SINE Alu 1 295 -18 1962 145 0 38 chr17 29603710 29603893 -59900660 + AluJb SINE Alu 138 305 -7 333 273 151 15 chr17 29603929 29604088 -59900465 - L1ME LINE L1 -615 5506 5325 2025 152 10 0 chr17 29604837 29605134 -59899419 - AluSx SINE Alu -12 300 1 1527 197 66 67 chr17 29605190 29605255 -59899298 - Charlie2 DNA MER1_type -103 2759 2695 2437 88 0 0 chr17 29605255 29605551 -59899002 - AluSx SINE Alu -16 296 1 1527 197 66 67 chr17 29605551 29605780 -59898773 - Charlie2 DNA MER1_type -167 2695 2467 1719 196 0 7 chr17 29605780 29606081 -59898472 + AluJb SINE Alu 1 299 -13 1527 197 66 67 chr17 29606081 29606394 -59898159 - Charlie2 DNA MER1_type -395 2467 2150 1959 145 3 3 chr17 29606394 29606677 -59897876 - AluJo SINE Alu -24 288 6 1527 197 66 67 chr17 29606677 29606737 -59897816 - Charlie2 DNA MER1_type -712 2150 2091 2557 79 0 0 chr17 29606741 29607046 -59897507 + AluSg SINE Alu 1 305 -5 918 103 0 81 chr17 29607048 29607222 -59897331 + L1MA2 LINE L1 6145 6304 0 423 233 17 33 chr17 29607304 29607424 -59897129 - Charlie2 DNA MER1_type -2657 125 8 1371 195 96 11 chr17 29607445 29607717 -59896836 - AluJo SINE Alu -7 295 1 211 194 0 0 chr17 29608051 29608087 -59896466 + GA-rich Low_complexity Low_complexity 2 37 0 1623 148 116 25 chr17 29609620 29609904 -59894649 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr17 29610022 29610052 -59894501 + AT_rich Low_complexity Low_complexity 1 30 0 335 313 57 8 chr17 29610114 29610360 -59894193 + HAL1 LINE L1 1122 1379 -1128 22 0 0 0 chr17 29610438 29610460 -59894093 + AT_rich Low_complexity Low_complexity 1 22 0 2550 66 0 0 chr17 29610466 29610768 -59893785 + AluY SINE Alu 1 302 -9 1076 169 0 0 chr17 29610970 29611130 -59893423 + FRAM SINE Alu 5 164 -12 2263 118 0 0 chr17 29611134 29611438 -59893115 + AluSg SINE Alu 5 308 -2 2279 108 0 3 chr17 29611618 29611913 -59892640 + AluSx SINE Alu 1 294 -18 2313 89 0 10 chr17 29611916 29612209 -59892344 + AluSg SINE Alu 1 290 -20 1151 103 29 29 chr17 29612212 29612386 -59892167 + AluSg/x SINE Alu 137 310 -2 2218 112 0 0 chr17 29612538 29612825 -59891728 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 29612825 29612856 -59891697 + AT_rich Low_complexity Low_complexity 1 31 0 956 177 25 20 chr17 29612912 29612976 -59891577 - MER3 DNA MER1_type 0 209 147 2119 74 70 0 chr17 29612976 29613246 -59891307 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 29613246 29613274 -59891279 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 956 177 25 20 chr17 29613274 29613287 -59891266 - MER3 DNA MER1_type -62 147 136 2420 81 0 3 chr17 29613287 29613583 -59890970 + AluSx SINE Alu 1 295 -17 956 177 25 20 chr17 29613583 29613706 -59890847 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 29615232 29615253 -59889300 + GC_rich Low_complexity Low_complexity 1 21 0 667 264 35 25 chr17 29615722 29615919 -59888634 - MIR SINE MIR -2 260 62 1082 126 53 80 chr17 29616176 29616322 -59888231 + MER33 DNA MER1_type 2 150 -2435 1482 132 87 56 chr17 29616322 29616452 -59888101 + AluJo SINE Alu 2 126 -186 2412 71 3 3 chr17 29616452 29616748 -59887805 + AluSx SINE Alu 1 296 -16 1482 132 87 56 chr17 29616748 29616904 -59887649 + AluJo SINE Alu 126 297 -15 1082 126 53 80 chr17 29616904 29616993 -59887560 + MER33 DNA MER1_type 150 240 -2345 1922 152 28 0 chr17 29616993 29617276 -59887277 - AluJo SINE Alu -21 291 1 2189 128 3 6 chr17 29617285 29617597 -59886956 - AluSx SINE Alu -1 311 1 1082 126 53 80 chr17 29617597 29617651 -59886902 + MER33 DNA MER1_type 248 294 -30 1533 143 8 13 chr17 29617672 29617910 -59886643 - AluJb SINE Alu -75 237 1 21 0 0 0 chr17 29617910 29617931 -59886622 + AT_rich Low_complexity Low_complexity 1 21 0 228 68 0 114 chr17 29618199 29618243 -59886310 - AluSx SINE Alu -8 293 255 1213 145 0 12 chr17 29618243 29618415 -59886138 - AluSx SINE Alu -142 170 1 455 145 58 0 chr17 29618415 29618484 -59886069 - AluJ/FRAM SINE Alu -17 295 223 441 127 0 0 chr17 29618498 29618561 -59885992 - U4 snRNA snRNA -82 63 1 519 161 49 0 chr17 29618576 29618657 -59885896 - AluJ/FLAM SINE Alu -225 87 3 2135 127 10 0 chr17 29618750 29619042 -59885511 - AluSx SINE Alu -17 295 1 2068 89 34 14 chr17 29619050 29619342 -59885211 - AluSg SINE Alu -12 298 1 29 0 0 0 chr17 29619345 29619374 -59885179 + AT_rich Low_complexity Low_complexity 1 29 0 244 233 0 0 chr17 29619562 29619622 -59884931 + T-rich Low_complexity Low_complexity 1 60 0 6783 68 14 26 chr17 29619629 29621459 -59883094 - SVA Other Other -799 1382 5 243 0 0 0 chr17 29621487 29621514 -59883039 + (GGGAGA)n Simple_repeat Simple_repeat 5 31 0 644 156 0 0 chr17 29621538 29621647 -59882906 - AluSp/q SINE Alu -3 310 202 2058 105 11 11 chr17 29621686 29621963 -59882590 - AluSp SINE Alu -19 294 18 2411 75 0 3 chr17 29621966 29622260 -59882293 - AluSc SINE Alu -16 293 1 1457 185 47 37 chr17 29622263 29622561 -59881992 - AluJo SINE Alu -11 301 1 2214 103 0 73 chr17 29622957 29623286 -59881267 + AluSq SINE Alu 1 305 -8 738 200 8 0 chr17 29623294 29623424 -59881129 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr17 29623464 29623492 -59881061 + AT_rich Low_complexity Low_complexity 1 28 0 289 267 40 80 chr17 29623541 29623617 -59880936 - MIR SINE MIR -61 147 85 2337 105 0 0 chr17 29623617 29623921 -59880632 + AluSx SINE Alu 3 306 -6 289 267 40 80 chr17 29623921 29623994 -59880559 - MIR SINE MIR -123 85 11 1980 146 7 7 chr17 29624512 29624807 -59879746 - AluSx SINE Alu -16 296 2 1880 126 15 7 chr17 29625185 29625456 -59879097 - AluSx SINE Alu -2 310 38 682 102 0 10 chr17 29625820 29625918 -59878635 + AluSg/x SINE Alu 210 306 -3 2212 113 3 17 chr17 29625919 29626221 -59878332 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr17 29628333 29628354 -59876199 + AT_rich Low_complexity Low_complexity 1 21 0 215 79 26 0 chr17 29630860 29630898 -59873655 + (TA)n Simple_repeat Simple_repeat 1 39 0 189 219 0 24 chr17 29631518 29631559 -59872994 - L2 LINE L2 -84 3229 3190 1086 141 0 25 chr17 29633914 29634077 -59870476 - AluSg/x SINE Alu -14 298 140 2394 101 3 0 chr17 29634079 29634385 -59870168 - AluSx SINE Alu -5 307 1 1354 199 132 0 chr17 29634396 29634668 -59869885 - AluSx SINE Alu -4 308 1 23 0 0 0 chr17 29634674 29634697 -59869856 + AT_rich Low_complexity Low_complexity 1 23 0 889 94 0 65 chr17 29635496 29635634 -59868919 + FLAM_C SINE Alu 2 130 -3 2464 75 3 0 chr17 29638947 29639254 -59865299 + AluSg SINE Alu 1 308 -2 298 311 101 20 chr17 29639337 29639518 -59865035 - MIR3 SINE MIR -54 208 3 313 267 280 33 chr17 29641057 29641207 -59863346 + MIR SINE MIR 4 190 -72 2520 94 0 0 chr17 29641208 29641561 -59862992 + AluSc SINE Alu 1 353 0 426 306 95 70 chr17 29641570 29641919 -59862634 + L2 LINE L2 2215 2554 -718 2280 101 10 0 chr17 29641919 29642215 -59862338 - AluSq SINE Alu -14 299 1 426 306 95 70 chr17 29642215 29642521 -59862032 + L2 LINE L2 2554 2896 -376 5129 141 45 20 chr17 29642521 29643363 -59861190 + MER21B LTR ERV1 1 863 0 426 306 95 70 chr17 29643363 29643525 -59861028 + L2 LINE L2 2896 3053 -219 2332 73 28 3 chr17 29643563 29643851 -59860702 - AluY SINE Alu -16 295 1 1542 126 0 27 chr17 29643887 29644109 -59860444 - AluSq SINE Alu -93 220 5 2154 122 0 3 chr17 29644805 29645101 -59859452 + AluSg SINE Alu 1 295 -15 717 186 34 0 chr17 29645237 29645355 -59859198 - FLAM_A SINE Alu -15 127 6 289 141 0 94 chr17 29645362 29645452 -59859101 - AluJb SINE Alu 0 302 236 2020 125 3 24 chr17 29645452 29645609 -59858944 - AluSg SINE Alu -21 289 130 275 0 29 0 chr17 29645609 29645644 -59858909 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2113 122 3 3 chr17 29645644 29645931 -59858622 - AluSq SINE Alu -26 287 1 2020 125 3 24 chr17 29645931 29646067 -59858486 - AluSg SINE Alu -178 132 1 1616 158 0 8 chr17 29646069 29646310 -59858243 - AluJb SINE Alu -67 245 7 1960 150 0 7 chr17 29646318 29646611 -59857942 - AluJb SINE Alu -21 291 1 2149 132 0 19 chr17 29646618 29646936 -59857617 - AluSx SINE Alu 0 312 1 1586 189 43 53 chr17 29647209 29647585 -59856968 + MLT1A2 LTR MaLR 3 374 0 1951 183 34 8 chr17 29648573 29648929 -59855624 + MLT1A1 LTR MaLR 1 365 0 189 0 0 0 chr17 29648992 29649013 -59855540 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 188 381 114 38 chr17 29651986 29652091 -59852462 + L2 LINE L2 3141 3253 -19 541 179 58 80 chr17 29652588 29652812 -59851741 + L1MC5 LINE L1 7691 7909 -52 818 149 7 64 chr17 29652909 29653050 -59851503 + FLAM_C SINE Alu 1 133 0 891 154 0 0 chr17 29653813 29653956 -59850597 - AluSg/x SINE Alu -1 311 169 286 266 13 0 chr17 29655000 29655079 -59849474 - MER116 DNA Mariner 0 80 1 224 311 151 25 chr17 29655206 29655325 -59849228 - L2 LINE L2 0 3272 3139 25 23 0 23 chr17 29656237 29656265 -59848288 + AT_rich Low_complexity Low_complexity 1 29 -13 2213 99 3 3 chr17 29656265 29656559 -59847994 + AluSg SINE Alu 1 294 -16 25 23 0 23 chr17 29656559 29656573 -59847980 + AT_rich Low_complexity Low_complexity 29 42 0 389 302 13 44 chr17 29657062 29657204 -59847349 + MIR SINE MIR 20 163 -45 861 211 0 17 chr17 29657207 29657387 -59847166 + MER8 DNA MER2_type 1 177 -62 271 193 105 0 chr17 29657365 29657422 -59847131 + MER2 DNA MER2_type 283 345 0 * 479 105 26 13 chr17 29657422 29657491 -59847062 - Tigger2 DNA MER2_type -2648 70 1 2260 103 0 26 chr17 29657512 29657823 -59846730 + AluSg SINE Alu 1 303 -7 2294 78 0 10 chr17 29658523 29658829 -59845724 + AluY SINE Alu 2 304 -7 204 67 0 0 chr17 29661100 29661130 -59843423 + (CCG)n Simple_repeat Simple_repeat 1 30 0 797 148 0 15 chr17 29661824 29661959 -59842594 - FLAM_A SINE Alu 0 133 1 2266 96 0 0 chr17 29663441 29663742 -59840811 + AluSx SINE Alu 1 301 -11 620 162 24 14 chr17 29663754 29664005 -59840548 + AluJ SINE Alu 2 303 -9 216 239 83 55 chr17 29664032 29664093 -59840460 + MIR SINE MIR 145 212 -50 2213 88 0 7 chr17 29664093 29664398 -59840155 + AluY SINE Alu 1 303 -8 216 239 83 55 chr17 29664398 29664445 -59840108 + MIR SINE MIR 212 256 -6 1437 174 51 14 chr17 29665542 29665664 -59838889 + AluJb SINE Alu 14 130 -182 1996 67 4 0 chr17 29665664 29665917 -59838636 + AluSp SINE Alu 60 313 0 1437 174 51 14 chr17 29665917 29666069 -59838484 + AluJb SINE Alu 130 298 -14 2250 71 3 0 chr17 29666094 29666404 -59838149 - AluSp SINE Alu 0 311 1 261 101 0 203 chr17 29666621 29666656 -59837897 - FAM SINE Alu -136 179 167 2238 88 0 52 chr17 29666656 29666984 -59837569 + AluSq SINE Alu 1 311 -2 261 101 0 203 chr17 29666984 29667027 -59837526 - FAM SINE Alu -148 167 117 797 255 53 0 chr17 29667028 29667216 -59837337 - AluJo SINE Alu -108 204 7 1670 153 32 7 chr17 29667235 29667516 -59837037 - AluSx SINE Alu -24 288 1 356 307 205 6 chr17 29667608 29667774 -59836779 + MIR SINE MIR 20 218 -44 198 0 0 0 chr17 29667932 29667954 -59836599 + (TG)n Simple_repeat Simple_repeat 2 23 0 6466 158 42 49 chr17 29667956 29668177 -59836376 + L1MC3 LINE L1 6134 6355 22 1058 168 12 0 chr17 29668177 29668350 -59836203 + FAM SINE Alu 1 175 0 6466 158 42 49 chr17 29668350 29668456 -59836097 + L1MC3 LINE L1 6355 6460 127 2128 112 3 0 chr17 29668456 29668760 -59835793 - AluSg SINE Alu -5 305 1 6466 158 42 49 chr17 29668760 29669683 -59834870 + L1MC3 LINE L1 6460 6122 -211 2014 89 7 4 chr17 29669683 29669991 -59834562 + AluSg SINE Alu 1 309 0 6466 158 42 49 chr17 29669991 29670122 -59834431 + L1MC3 LINE L1 6121 6251 -82 1489 153 76 11 chr17 29670181 29670456 -59834097 + AluJo SINE Alu 1 293 -19 2035 107 3 17 chr17 29670685 29670822 -59833731 + AluSx SINE Alu 1 138 -174 2052 125 0 19 chr17 29670822 29671133 -59833420 + AluSg SINE Alu 1 305 -5 2035 107 3 17 chr17 29671133 29671295 -59833258 + AluSx SINE Alu 138 296 -16 336 138 46 31 chr17 29672303 29672368 -59832185 + AluJo SINE Alu 115 180 -122 286 143 41 0 chr17 29672373 29672422 -59832131 - Alu SINE Alu -249 51 1 25 0 0 0 chr17 29672431 29672456 -59832097 + AT_rich Low_complexity Low_complexity 1 25 0 1945 132 3 10 chr17 29672456 29672760 -59831793 + AluSx SINE Alu 1 302 -10 2189 109 0 0 chr17 29673104 29673407 -59831146 + AluSg SINE Alu 6 308 -2 707 169 17 0 chr17 29673419 29673537 -59831016 + FLAM_C SINE Alu 1 120 -13 1859 150 3 0 chr17 29673557 29673850 -59830703 - AluJb SINE Alu -18 294 1 27 29 0 0 chr17 29673850 29673884 -59830669 + AT_rich Low_complexity Low_complexity 1 34 0 1325 179 16 12 chr17 29673886 29674132 -59830421 + AluJb SINE Alu 1 247 -65 5600 54 5 331 chr17 29674405 29676428 -59828125 - SVA Other Other 0 1386 23 199 281 56 22 chr17 29676441 29676530 -59828023 + MER5B DNA MER1_type 85 176 -2 394 211 35 105 chr17 29676654 29676768 -59827785 - MER5A DNA MER1_type -3 186 81 241 316 0 13 chr17 29677123 29677199 -59827354 + L2 LINE L2 3194 3268 -4 180 0 0 0 chr17 29677240 29677260 -59827293 + (A)n Simple_repeat Simple_repeat 1 20 0 568 301 129 10 chr17 29677495 29677704 -59826849 + MIR SINE MIR 21 254 -8 801 136 0 0 chr17 29679985 29680110 -59824443 - FRAM SINE Alu -10 166 42 2007 299 75 30 chr17 29680141 29680382 -59824171 + L2 LINE L2 1865 2094 -1220 2012 106 11 0 chr17 29680382 29680665 -59823888 + AluSx SINE Alu 1 286 -26 2007 299 75 30 chr17 29680665 29681279 -59823274 + L2 LINE L2 2094 2758 -556 267 239 283 18 chr17 29681517 29681630 -59822923 + L2 LINE L2 3159 3301 -12 2032 102 0 24 chr17 29681633 29681928 -59822625 + AluSx SINE Alu 2 289 -23 201 39 0 0 chr17 29681929 29681955 -59822598 + (TATATG)n Simple_repeat Simple_repeat 6 31 0 774 169 0 0 chr17 29681955 29682079 -59822474 + FRAM SINE Alu 29 152 -24 199 224 20 20 chr17 29682102 29682151 -59822402 + L2 LINE L2 2709 2757 -557 814 97 79 0 chr17 29682855 29682969 -59821584 + AluSc SINE Alu 167 289 -20 2234 106 3 0 chr17 29682976 29683288 -59821265 + AluSq SINE Alu 1 313 0 394 343 34 23 chr17 29683719 29683894 -59820659 + MIR SINE MIR 15 191 -71 263 234 31 0 chr17 29684702 29684766 -59819787 - L2 LINE L2 -3 3269 3204 2387 56 7 3 chr17 29684783 29685086 -59819467 - AluSp SINE Alu -9 304 1 300 235 78 61 chr17 29685386 29685501 -59819052 - MIR SINE MIR -75 187 71 694 196 48 12 chr17 29685577 29685745 -59818808 + Charlie1b DNA MER1_type 114 287 -236 2038 108 0 3 chr17 29685750 29686037 -59818516 - AluSx SINE Alu -26 286 1 827 131 25 0 chr17 29686044 29686166 -59818387 - AluSq/x SINE Alu -185 127 3 819 166 61 22 chr17 29686170 29686210 -59818343 + Charlie1b DNA MER1_type 274 311 -2450 1584 120 94 11 chr17 29686210 29686500 -59818053 + AluSx SINE Alu 1 312 0 819 166 61 22 chr17 29686500 29686688 -59817865 + Charlie1b DNA MER1_type 311 511 -12 269 336 50 25 chr17 29687750 29687869 -59816684 - L2 LINE L2 -9 3263 3142 241 222 19 0 chr17 29688132 29688186 -59816367 + (TA)n Simple_repeat Simple_repeat 1 55 0 377 221 58 18 chr17 29688186 29688296 -59816257 - L1MCa LINE L1 -1339 6983 1995 325 294 24 0 chr17 29688221 29688306 -59816247 + L1MC3 LINE L1 6571 6657 -1128 * 322 264 88 57 chr17 29688913 29689072 -59815481 - L2 LINE L2 -1 3312 3149 1604 172 28 3 chr17 29691924 29692209 -59812344 + AluJo SINE Alu 3 294 -18 2018 114 0 39 chr17 29692224 29692368 -59812185 + AluSq SINE Alu 1 128 -185 1991 112 3 36 chr17 29692368 29692673 -59811880 + AluSx SINE Alu 1 295 -17 2018 114 0 39 chr17 29692673 29692835 -59811718 + AluSq SINE Alu 128 295 -18 2212 95 0 3 chr17 29694369 29694665 -59809888 + AluSx SINE Alu 3 297 -15 489 167 0 0 chr17 29694679 29694757 -59809796 + FRAM/FAM SINE Alu 1 77 -99 1738 129 3 32 chr17 29694884 29695195 -59809358 - AluSp SINE Alu -11 302 1 2219 102 0 3 chr17 29695363 29695666 -59808887 - AluSx SINE Alu -10 302 1 29 0 0 0 chr17 29695737 29695766 -59808787 + AT_rich Low_complexity Low_complexity 1 29 0 1185 161 0 22 chr17 29696703 29696926 -59807627 - AluJb SINE Alu -10 302 85 189 0 0 0 chr17 29696928 29696949 -59807604 + (T)n Simple_repeat Simple_repeat 1 21 0 1710 74 22 9 chr17 29697002 29697233 -59807320 - L1PA8 LINE L1 0 6172 5939 744 114 9 0 chr17 29697487 29697601 -59806952 - AluSg/x SINE Alu -5 305 191 2284 53 0 0 chr17 29697705 29698027 -59806526 - AluY SINE Alu 0 322 1 2050 154 15 28 chr17 29698027 29698417 -59806136 - L1 LINE L1 -2218 3928 3544 817 157 8 15 chr17 29698633 29698767 -59805786 + FLAM_C SINE Alu 1 133 0 31 0 0 0 chr17 29698767 29698798 -59805755 + AT_rich Low_complexity Low_complexity 1 31 0 452 249 46 52 chr17 29698815 29698988 -59805565 + AluSc SINE Alu 119 290 -19 993 166 5 27 chr17 29699413 29699430 -59805123 + AluJo SINE Alu 120 136 -176 2273 75 3 0 chr17 29699430 29699724 -59804829 + AluSg SINE Alu 1 295 -15 2398 63 0 3 chr17 29699724 29700026 -59804527 + AluY SINE Alu 1 301 -10 993 166 5 27 chr17 29700026 29700194 -59804359 + AluJo SINE Alu 134 302 -10 1869 166 0 3 chr17 29700197 29700504 -59804049 + AluSx SINE Alu 5 310 -2 1201 184 31 86 chr17 29700601 29700927 -59803626 - AluJo SINE Alu 0 312 5 21 0 0 0 chr17 29701018 29701039 -59803514 + AT_rich Low_complexity Low_complexity 1 21 0 1284 178 33 4 chr17 29701173 29701448 -59803105 + L1MA8 LINE L1 4195 4477 -1669 1929 138 0 10 chr17 29701452 29701757 -59802796 + AluSq SINE Alu 5 306 -7 970 162 67 0 chr17 29701757 29701981 -59802572 + L1MA8 LINE L1 5190 5426 -742 1034 174 0 15 chr17 29701982 29702177 -59802376 + AluJb SINE Alu 121 312 0 3513 136 62 14 chr17 29702183 29702823 -59801730 + L1MA8 LINE L1 5442 6112 -179 290 259 0 0 chr17 29702833 29702891 -59801662 + Tigger3(Golem) DNA MER2_type 22 79 -2950 1693 169 13 0 chr17 29702894 29703196 -59801357 + AluJo SINE Alu 1 306 -6 367 267 12 108 chr17 29703197 29703455 -59801098 + L1ME4a LINE L1 5645 5877 -244 329 188 0 0 chr17 29703572 29703620 -59800933 + AluSp SINE Alu 137 184 -119 268 266 0 0 chr17 29704490 29704554 -59799999 + MIR SINE MIR 161 224 -38 1902 126 27 7 chr17 29704729 29705030 -59799523 - AluSx SINE Alu -5 307 1 339 307 223 37 chr17 29705039 29705335 -59799218 + L3 LINE CR1 1225 1575 -2 217 225 101 80 chr17 29705370 29705508 -59799045 - MIR SINE MIR 0 262 122 1421 170 31 0 chr17 29705528 29705787 -59798766 + AluJo SINE Alu 14 280 -32 1388 195 34 7 chr17 29705843 29706135 -59798418 + AluJo SINE Alu 1 300 -12 182 310 58 11 chr17 29706137 29706224 -59798329 - L2 LINE L2 -190 3123 3033 2146 65 61 0 chr17 29706374 29706651 -59797902 - AluY SINE Alu -17 294 1 2331 83 0 0 chr17 29706707 29707007 -59797546 - AluSc SINE Alu -9 300 1 2229 68 0 39 chr17 29707032 29707343 -59797210 - AluY SINE Alu -12 299 1 1690 164 7 3 chr17 29707348 29707641 -59796912 - AluJo SINE Alu -17 295 2 2238 74 10 0 chr17 29707765 29708063 -59796490 - AluSp SINE Alu -12 301 1 467 320 50 17 chr17 29708356 29708537 -59796016 + L2 LINE L2 1807 1993 -1321 * 1041 171 4 92 chr17 29708533 29708772 -59795781 - AluJb SINE Alu -9 303 86 571 241 361 4 chr17 29708772 29709046 -59795507 + L2 LINE L2 1981 2352 -962 2238 69 3 13 chr17 29709052 29709356 -59795197 - AluY SINE Alu -10 301 1 916 35 0 17 chr17 29709357 29709472 -59795081 - AluSc SINE Alu -196 113 1 854 246 26 64 chr17 29709498 29709881 -59794672 + L2 LINE L2 2732 3102 -211 241 333 118 31 chr17 29709954 29710149 -59794404 + L2 LINE L2 3101 3312 -1 896 168 52 0 chr17 29710292 29710447 -59794106 - AluSg/x SINE Alu -17 295 133 2084 94 7 3 chr17 29710448 29710745 -59793808 - AluY SINE Alu -13 298 1 349 317 96 30 chr17 29710794 29710961 -59793592 + L1MC4 LINE L1 6613 6790 -1252 1988 120 0 3 chr17 29711276 29711568 -59792985 + AluSg SINE Alu 1 291 -19 2150 73 0 14 chr17 29711649 29711938 -59792615 + AluY SINE Alu 1 285 -26 23 0 0 0 chr17 29711941 29711964 -59792589 + AT_rich Low_complexity Low_complexity 1 23 0 1079 36 0 36 chr17 29712320 29712457 -59792096 + AluY SINE Alu 1 132 -179 2212 103 0 0 chr17 29712492 29712793 -59791760 + AluSg SINE Alu 1 301 -9 2121 106 10 19 chr17 29713071 29713383 -59791170 + AluSq SINE Alu 1 309 -4 2048 119 3 0 chr17 29713397 29713691 -59790862 + AluSx SINE Alu 4 298 -14 213 132 0 0 chr17 29714000 29714038 -59790515 + (T)n Simple_repeat Simple_repeat 1 38 0 678 99 0 11 chr17 29714606 29714697 -59789856 + AluSg/x SINE Alu 69 158 -152 540 167 0 0 chr17 29714799 29714877 -59789676 - AluJ/FLAM SINE Alu -233 79 2 346 281 39 21 chr17 29714881 29715035 -59789518 - MIR SINE MIR -63 145 33 213 65 0 0 chr17 29715335 29715366 -59789187 + (ATG)n Simple_repeat Simple_repeat 2 32 0 2145 89 7 7 chr17 29715367 29715524 -59789029 - AluSq SINE Alu -22 291 132 1886 101 40 34 chr17 29715524 29715821 -59788732 - AluSq SINE Alu -14 299 1 2145 89 7 7 chr17 29715821 29715954 -59788599 - AluSq SINE Alu -180 133 1 2280 55 3 64 chr17 29716718 29717046 -59787507 - AluY SINE Alu -3 308 1 2348 74 10 0 chr17 29717647 29717946 -59786607 - AluSp SINE Alu -11 302 1 1810 181 0 0 chr17 29718063 29718361 -59786192 - AluJo SINE Alu -14 298 1 1980 127 0 29 chr17 29718566 29718873 -59785680 - AluSx SINE Alu -14 298 1 216 0 0 0 chr17 29718902 29718926 -59785627 + (A)n Simple_repeat Simple_repeat 1 24 0 1868 127 14 10 chr17 29719023 29719315 -59785238 - AluSg1 SINE Alu -16 293 1 1805 249 67 94 chr17 29719451 29720658 -59783895 + L1MC4 LINE L1 6730 7903 -139 284 266 0 16 chr17 29720798 29720862 -59783691 - AluJb SINE Alu -61 241 179 * 329 175 63 0 chr17 29720840 29720903 -59783650 + AluJ/FRAM SINE Alu 232 298 -4 1706 151 33 10 chr17 29721228 29721532 -59783021 + AluSx SINE Alu 1 311 -1 1622 149 38 14 chr17 29722132 29722421 -59782132 + AluJb SINE Alu 1 296 -16 2024 95 0 83 chr17 29723625 29723950 -59780603 - AluY SINE Alu -13 298 1 1657 157 24 11 chr17 29725239 29725572 -59778981 - AluJb SINE Alu 0 312 1 383 299 152 51 chr17 29725607 29726041 -59778512 + L3 LINE CR1 1081 1558 -19 2366 57 0 35 chr17 29726973 29727287 -59777266 + AluSg SINE Alu 1 303 -7 184 225 0 25 chr17 29727737 29727817 -59776736 + GA-rich Low_complexity Low_complexity 1 78 0 225 227 45 0 chr17 29728149 29728215 -59776338 + (CCCCAG)n Simple_repeat Simple_repeat 2 70 0 749 127 9 9 chr17 29728931 29729041 -59775512 + AluJb SINE Alu 106 215 -97 189 121 0 0 chr17 29730143 29730176 -59774377 + (A)n Simple_repeat Simple_repeat 1 33 0 1374 120 5 23 chr17 29730190 29730269 -59774284 - AluSx SINE Alu -100 212 133 2228 66 36 10 chr17 29730269 29730572 -59773981 - AluY SINE Alu 0 311 1 1374 120 5 23 chr17 29730572 29730708 -59773845 - AluSx SINE Alu -179 133 1 522 252 69 25 chr17 29732993 29733152 -59771401 + MIR SINE MIR 31 196 -66 209 154 0 115 chr17 29733255 29733307 -59771246 + MIR SINE MIR 215 260 -2 21 36 0 0 chr17 29734473 29734501 -59770052 + GC_rich Low_complexity Low_complexity 1 28 0 1807 97 60 7 chr17 29735783 29736082 -59768471 - AluJb SINE Alu 0 313 1 206 232 71 0 chr17 29736097 29736153 -59768400 + MIR SINE MIR 67 126 -82 1163 62 56 0 chr17 29736390 29736551 -59768002 + AluY SINE Alu 142 311 0 2171 84 3 10 chr17 29737829 29738127 -59766426 + AluSp SINE Alu 1 296 -17 1518 186 7 20 chr17 29738667 29738973 -59765580 - AluJb SINE Alu -10 302 1 605 280 102 18 chr17 29738982 29739207 -59765346 - L2 LINE L2 -854 2460 2217 474 291 0 0 chr17 29739207 29739317 -59765236 - L2 LINE L2 -1 3271 3162 544 261 167 0 chr17 29739358 29739538 -59765015 - MIR SINE MIR -13 249 40 2148 77 0 56 chr17 29740180 29740503 -59764050 + AluY SINE Alu 1 305 -6 200 305 49 0 chr17 29741304 29741386 -59763167 + L2 LINE L2 3104 3189 -83 7701 25 6 0 chr17 29741569 29743008 -59761545 - L1PA4 LINE L1 -1 6154 4709 405 284 43 19 chr17 29744142 29744304 -59760249 - MIR SINE MIR -15 247 82 298 219 16 0 chr17 29745111 29745175 -59759378 - L2 LINE L2 -1 3312 3248 2236 85 3 0 chr17 29745244 29745539 -59759014 - AluSg SINE Alu -14 296 1 269 332 82 69 chr17 29745554 29745801 -59758752 - L2 LINE L2 -20 3252 2999 2196 110 0 0 chr17 29745801 29746102 -59758451 + AluSg SINE Alu 6 306 -4 269 332 82 69 chr17 29746102 29746158 -59758395 - L2 LINE L2 -273 2999 2945 1662 58 0 5 chr17 29748105 29748312 -59756241 + AluY SINE Alu 1 206 -105 352 56 0 0 chr17 29748312 29748366 -59756187 + AluY SINE Alu 247 300 0 511 140 66 88 chr17 29748437 29748573 -59755980 + FLAM_C SINE Alu 1 133 0 2365 90 0 0 chr17 29748584 29748896 -59755657 + AluSx SINE Alu 1 312 0 31 0 0 0 chr17 29750123 29750154 -59754399 + GC_rich Low_complexity Low_complexity 1 31 0 385 239 35 26 chr17 29750517 29750630 -59753923 - MIR SINE MIR -103 159 46 321 237 2 0 chr17 29751397 29751467 -59753086 + AluSp SINE Alu 130 187 -116 21 138 0 0 chr17 29751652 29751681 -59752872 + AT_rich Low_complexity Low_complexity 1 29 0 248 295 126 11 chr17 29756931 29757026 -59747527 + MIR SINE MIR 89 194 -68 783 175 0 0 chr17 29757190 29757316 -59747237 + AluSg/x SINE Alu 166 291 -21 1934 93 34 28 chr17 29757323 29757614 -59746939 + AluSc SINE Alu 1 293 -16 1237 171 156 12 chr17 29757898 29758007 -59746546 + AluSx SINE Alu 1 93 -209 2091 109 0 7 chr17 29758007 29758310 -59746243 + AluSq SINE Alu 1 301 -12 1237 171 156 12 chr17 29758310 29758457 -59746096 + AluSx SINE Alu 93 294 -8 1984 125 14 0 chr17 29758829 29759117 -59745436 + AluSg SINE Alu 1 292 -18 1778 70 4 0 chr17 29759123 29759351 -59745202 + AluY SINE Alu 83 311 0 296 106 0 0 chr17 29759419 29759469 -59745084 + Alu SINE Alu 1 38 -270 198 103 0 0 chr17 29759469 29759498 -59745055 + (TTA)n Simple_repeat Simple_repeat 2 30 0 252 86 0 0 chr17 29759877 29759912 -59744641 + (A)n Simple_repeat Simple_repeat 1 35 0 2021 116 0 30 chr17 29759966 29760267 -59744286 - AluSx SINE Alu -20 292 1 2095 139 3 0 chr17 29760866 29761175 -59743378 - AluSx SINE Alu 0 312 3 1383 183 62 24 chr17 29761176 29761466 -59743087 - AluJo SINE Alu -11 301 1 2165 107 0 3 chr17 29761842 29762141 -59742412 + AluSx SINE Alu 1 298 -14 205 175 0 25 chr17 29766417 29766457 -59738096 + GA-rich Low_complexity Low_complexity 3 41 0 388 353 87 0 chr17 29766591 29766775 -59737778 - MIR SINE MIR -8 254 55 2226 95 0 19 chr17 29766830 29767145 -59737408 + AluSx SINE Alu 2 310 -2 2247 96 0 3 chr17 29768884 29769186 -59735367 + AluSg SINE Alu 2 302 -8 2234 71 3 14 chr17 29769196 29769492 -59735061 + AluSg1 SINE Alu 3 295 -14 338 303 103 18 chr17 29770216 29770381 -59734172 + MIR SINE MIR 84 262 0 1129 119 0 0 chr17 29770674 29770833 -59733720 + AluSg/x SINE Alu 147 305 -7 837 198 6 6 chr17 29770835 29771002 -59733551 + AluJo/FRAM SINE Alu 137 303 -9 2211 101 10 0 chr17 29771005 29771313 -59733240 + AluSp SINE Alu 1 311 -2 1110 188 52 0 chr17 29771802 29772015 -59732538 + MER58A DNA MER1_type 1 224 0 2083 115 7 13 chr17 29772713 29773018 -59731535 + AluSq SINE Alu 1 303 -10 2403 63 0 7 chr17 29773695 29773998 -59730555 - AluSq SINE Alu -12 301 1 1852 136 7 4 chr17 29774008 29774317 -59730236 - AluSx SINE Alu 0 310 1 1709 76 16 24 chr17 29775137 29775388 -59729165 + AluY SINE Alu 55 303 -8 1395 112 0 0 chr17 29775401 29775597 -59728956 - AluSc SINE Alu -113 196 1 459 195 229 8 chr17 29776137 29776255 -59728298 + FRAM SINE Alu 23 166 -10 239 117 39 39 chr17 29779387 29779464 -59725089 + C-rich Low_complexity Low_complexity 3 79 0 204 267 23 23 chr17 29780241 29780327 -59724226 + G-rich Low_complexity Low_complexity 4 89 0 2467 71 0 3 chr17 29780733 29781042 -59723511 - AluSx SINE Alu -4 308 1 451 284 117 19 chr17 29782208 29782472 -59722081 - L2 LINE L2 0 3313 3024 1039 130 0 0 chr17 29782490 29782644 -59721909 - AluSg/x SINE Alu -25 287 134 2076 87 6 37 chr17 29782645 29782967 -59721586 - AluSx SINE Alu 0 312 1 331 329 74 23 chr17 29782968 29783184 -59721369 - L2 LINE L2 -239 3033 2807 1110 126 11 0 chr17 29783225 29783399 -59721154 - AluY SINE Alu -3 308 133 2196 106 0 10 chr17 29783403 29783715 -59720838 - AluSq SINE Alu -4 309 1 1728 168 13 0 chr17 29783719 29784022 -59720531 - AluSq SINE Alu -6 307 1 24 0 0 0 chr17 29784129 29784153 -59720400 + AT_rich Low_complexity Low_complexity 1 24 0 995 254 42 16 chr17 29785134 29785512 -59719041 - L1ME4a LINE L1 -3 6118 5731 2027 135 3 0 chr17 29786697 29787001 -59717552 + AluSx SINE Alu 1 305 -7 2071 124 3 0 chr17 29787449 29787747 -59716806 + AluSx SINE Alu 1 299 -13 2370 70 0 0 chr17 29787773 29788073 -59716480 + AluY SINE Alu 1 300 -11 695 173 0 47 chr17 29788109 29788236 -59716317 + FLAM_A SINE Alu 3 123 -10 2431 44 7 3 chr17 29788246 29788541 -59716012 + AluY SINE Alu 1 296 -15 1110 123 0 0 chr17 29788555 29788709 -59715844 + AluSq SINE Alu 1 154 -159 191 294 49 84 chr17 29788710 29788794 -59715759 + L3b LINE CR1 1298 1383 -200 1452 176 45 52 chr17 29788794 29788926 -59715627 + AluJb SINE Alu 5 136 -166 2406 74 0 0 chr17 29788926 29789225 -59715328 + AluY SINE Alu 3 301 -10 1452 176 45 52 chr17 29789225 29789382 -59715171 + AluJb SINE Alu 136 292 -10 2213 97 0 3 chr17 29789383 29789682 -59714871 + AluSx SINE Alu 1 298 -14 191 294 49 84 chr17 29789682 29789738 -59714815 + L3b LINE CR1 1382 1435 -148 2032 106 10 14 chr17 29790922 29791214 -59713339 + AluSx SINE Alu 1 291 -21 487 205 33 86 chr17 29791404 29791555 -59712998 + MIR3 SINE MIR 60 202 -6 1438 158 17 47 chr17 29792096 29792229 -59712324 + AluJo SINE Alu 11 146 -166 1841 138 35 0 chr17 29792229 29792518 -59712035 + AluSx SINE Alu 1 299 -13 1956 117 38 0 chr17 29792519 29792809 -59711744 + AluSx SINE Alu 1 301 -11 1438 158 17 47 chr17 29792809 29792971 -59711582 + AluJo SINE Alu 145 299 -13 540 319 174 17 chr17 29794936 29795293 -59709260 + L3 LINE CR1 973 1385 -192 389 338 79 21 chr17 29795318 29795558 -59708995 - MIR SINE MIR -2 260 7 281 338 37 22 chr17 29795546 29795682 -59708871 + L3 LINE CR1 1434 1571 -6 * 448 305 86 5 chr17 29798582 29798769 -59705784 + MIR SINE MIR 40 241 -21 279 303 0 0 chr17 29800083 29800159 -59704394 + CT-rich Low_complexity Low_complexity 5 80 0 253 260 16 57 chr17 29801547 29801670 -59702883 + CT-rich Low_complexity Low_complexity 5 122 0 667 279 40 15 chr17 29802473 29802674 -59701879 + MIR SINE MIR 8 213 -49 255 307 89 0 chr17 29803018 29803119 -59701434 - L2 LINE L2 -3 3269 3160 255 157 0 0 chr17 29803121 29803172 -59701381 + G-rich Low_complexity Low_complexity 1 51 0 192 333 103 11 chr17 29804304 29804391 -59700162 + L2 LINE L2 1862 1956 -1358 488 66 0 0 chr17 29804396 29804493 -59700060 - Alu SINE Alu 0 316 220 341 299 17 34 chr17 29804626 29804803 -59699750 + GA-rich Low_complexity Low_complexity 2 175 0 * 372 328 0 53 chr17 29804733 29804922 -59699631 + A-rich Low_complexity Low_complexity 2 180 0 864 198 32 29 chr17 29804983 29805261 -59699292 + AluSx SINE Alu 33 311 -1 753 141 39 8 chr17 29805420 29805548 -59699005 - AluJo SINE Alu -176 136 5 2144 116 10 7 chr17 29805865 29806175 -59698378 - AluSx SINE Alu -1 311 1 1929 141 0 0 chr17 29807561 29807838 -59696715 + AluSx SINE Alu 1 277 -35 180 97 0 0 chr17 29807849 29807880 -59696673 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2280 110 0 0 chr17 29807932 29808242 -59696311 + AluSp SINE Alu 2 311 -2 542 226 45 45 chr17 29808633 29808766 -59695787 - FLAM_A SINE Alu 0 133 1 2229 88 3 36 chr17 29809082 29809387 -59695166 - AluSp SINE Alu -18 295 1 200 292 0 0 chr17 29809665 29809713 -59694840 + GA-rich Low_complexity Low_complexity 3 50 0 198 103 0 0 chr17 29809836 29809865 -59694688 + (GGAAA)n Simple_repeat Simple_repeat 5 33 0 1444 186 33 7 chr17 29809866 29810141 -59694412 - AluSx SINE Alu -30 282 1 2438 75 3 0 chr17 29811010 29811316 -59693237 + AluY SINE Alu 1 307 -4 2186 98 0 14 chr17 29812291 29812577 -59691976 + AluSg SINE Alu 17 298 -12 1762 158 23 26 chr17 29812586 29812889 -59691664 + AluSq SINE Alu 6 307 -6 2265 95 3 3 chr17 29813723 29814018 -59690535 + AluSx SINE Alu 1 295 -17 2226 95 20 3 chr17 29814034 29814328 -59690225 + AluSq SINE Alu 1 299 -14 862 152 0 67 chr17 29814692 29814839 -59689714 + FRAM SINE Alu 1 23 -153 2574 54 0 22 chr17 29814839 29815155 -59689398 + AluY SINE Alu 1 309 -2 862 152 0 67 chr17 29815155 29815172 -59689381 + FRAM SINE Alu 23 40 0 242 267 22 7 chr17 29815867 29816002 -59688551 + L1M4 LINE L1 5248 5384 -762 2088 115 3 26 chr17 29817229 29817533 -59687020 - AluSx SINE Alu -15 297 1 2374 92 3 3 chr17 29817544 29817847 -59686706 - AluSc SINE Alu -6 303 1 257 214 60 119 chr17 29817969 29818137 -59686416 - MIR SINE MIR -3 259 102 2068 119 3 16 chr17 29818272 29818584 -59685969 + AluSq SINE Alu 1 308 -5 1046 125 0 13 chr17 29818584 29818736 -59685817 + AluSg/x SINE Alu 132 281 -29 1458 196 44 40 chr17 29818902 29819198 -59685355 + AluJo SINE Alu 1 297 -5 1176 187 4 22 chr17 29819198 29819423 -59685130 + AluJo SINE Alu 86 306 -6 224 314 16 66 chr17 29819570 29819691 -59684862 - L2 LINE L2 -164 3108 2994 347 358 13 13 chr17 29819844 29819995 -59684558 - L2 LINE L2 -568 2746 2596 224 301 266 0 chr17 29820136 29820249 -59684304 - MIR SINE MIR -71 191 49 261 241 170 9 chr17 29820305 29820417 -59684136 + MIR3 SINE MIR 14 143 -65 451 154 0 0 chr17 29820899 29820964 -59683589 + AluJ/FLAM SINE Alu 2 66 -246 658 129 88 95 chr17 29820965 29821112 -59683441 + AluJo/FRAM SINE Alu 165 310 -2 1835 88 8 0 chr17 29821116 29821382 -59683171 + AluSx SINE Alu 45 312 0 585 207 0 0 chr17 29821549 29821660 -59682893 - L1ME LINE L1 -417 5747 5637 2214 97 0 29 chr17 29821663 29821972 -59682581 - AluY SINE Alu -11 300 1 2267 106 3 0 chr17 29821982 29822283 -59682270 - AluY SINE Alu -9 302 1 967 202 29 4 chr17 29822283 29822526 -59682027 - L1ME LINE L1 -874 5272 5024 809 153 0 0 chr17 29822527 29822645 -59681908 + FLAM_C SINE Alu 1 118 -25 239 53 0 26 chr17 29822648 29822686 -59681867 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr17 29822686 29822707 -59681846 + AT_rich Low_complexity Low_complexity 1 21 0 344 164 15 0 chr17 29822727 29822794 -59681759 - L1ME LINE L1 -1236 4910 4843 1358 109 16 0 chr17 29822810 29823003 -59681550 - AluSg/x SINE Alu -3 307 112 2355 97 3 0 chr17 29823171 29823480 -59681073 - AluSx SINE Alu -2 310 1 2138 104 0 46 chr17 29823491 29823818 -59680735 - AluSx SINE Alu 0 312 1 26 0 0 0 chr17 29823819 29823845 -59680708 + AT_rich Low_complexity Low_complexity 1 26 0 2102 105 35 0 chr17 29824104 29824389 -59680164 - AluSx SINE Alu -7 305 11 1216 76 0 0 chr17 29825177 29825322 -59679231 - AluSg1 SINE Alu -164 145 1 2100 108 0 17 chr17 29825353 29825505 -59679048 - AluSc SINE Alu -26 283 137 2249 115 3 0 chr17 29825505 29825817 -59678736 - AluSp SINE Alu 0 313 1 2100 108 0 17 chr17 29825817 29825952 -59678601 - AluSc SINE Alu -172 137 1 2056 142 3 0 chr17 29825983 29826271 -59678282 + AluJb SINE Alu 1 289 -23 2106 122 7 7 chr17 29826280 29826574 -59677979 + AluSq SINE Alu 1 294 -19 2038 122 31 3 chr17 29826598 29826885 -59677668 + AluSq SINE Alu 1 295 -18 619 182 0 18 chr17 29826885 29826995 -59677558 - AluJo/FLAM SINE Alu -194 118 11 254 283 106 18 chr17 29827248 29827361 -59677192 + MIR SINE MIR 23 145 -117 2183 124 3 0 chr17 29827365 29827664 -59676889 + AluSx SINE Alu 1 300 -12 2142 88 4 4 chr17 29827664 29827937 -59676616 + AluSg SINE Alu 1 273 -37 1206 74 0 0 chr17 29828042 29828191 -59676362 - AluSp/q SINE Alu 0 313 165 1705 166 7 23 chr17 29828225 29828532 -59676021 + AluJb SINE Alu 1 302 -10 1413 206 24 73 chr17 29828714 29828849 -59675704 - L1ME1 LINE L1 -38 6128 5988 2316 87 3 7 chr17 29828849 29829148 -59675405 - AluSg SINE Alu -12 298 1 1413 206 24 73 chr17 29829148 29829161 -59675392 - L1ME1 LINE L1 -178 5988 5976 1521 106 173 16 chr17 29829161 29829416 -59675137 - AluSg SINE Alu -5 295 1 1413 206 24 73 chr17 29829416 29829689 -59674864 - L1ME1 LINE L1 -190 5976 5727 1866 135 0 17 chr17 29829943 29830240 -59674313 + AluSq SINE Alu 1 292 -21 1043 168 0 11 chr17 29830253 29830438 -59674115 + AluSg/x SINE Alu 130 312 0 328 198 2 0 chr17 29830438 29830497 -59674056 - L1MC4 LINE L1 -1339 6983 2006 1023 164 12 0 chr17 29830512 29830677 -59673876 + AluSg/x SINE Alu 132 298 -14 453 318 51 17 chr17 29830786 29830962 -59673591 + L2 LINE L2 1807 1988 -1326 1127 171 4 92 chr17 29830963 29831202 -59673351 - AluJb SINE Alu -9 303 86 1061 266 193 41 chr17 29831202 29831481 -59673072 + L2 LINE L2 1981 2216 -1098 2609 63 0 0 chr17 29831481 29831782 -59672771 - AluY SINE Alu -10 301 1 1741 180 3 3 chr17 29831787 29832082 -59672471 - AluJo SINE Alu -9 303 9 1061 266 193 41 chr17 29832082 29832376 -59672177 + L2 LINE L2 2219 2648 -666 1444 84 52 5 chr17 29832388 29832579 -59671974 - AluSp SINE Alu -21 292 93 408 149 0 30 chr17 29832682 29832749 -59671804 - AluS SINE Alu -245 66 2 268 242 141 61 chr17 29832754 29832853 -59671700 + L2 LINE L2 3198 3304 -9 1734 159 0 49 chr17 29833077 29833385 -59671168 - AluJb SINE Alu -14 298 6 2109 118 20 10 chr17 29833397 29833703 -59670850 - AluSq SINE Alu -4 309 1 291 0 0 49 chr17 29833793 29833834 -59670719 + AluSq SINE Alu 19 57 -244 1980 200 72 30 chr17 29833835 29834305 -59670248 - LTR2B LTR ERV1 0 490 1 1731 127 8 0 chr17 29834306 29834550 -59670003 + AluSq SINE Alu 56 301 -12 1900 119 6 61 chr17 29834564 29834875 -59669678 + AluSg SINE Alu 1 294 -16 2389 70 13 10 chr17 29834877 29835196 -59669357 + AluY SINE Alu 1 311 0 1294 112 0 0 chr17 29835203 29835372 -59669181 + AluSx SINE Alu 1 169 -143 271 279 68 54 chr17 29835701 29835848 -59668705 + L2 LINE L2 2924 3072 -200 824 154 0 22 chr17 29836147 29836283 -59668270 + FLAM_C SINE Alu 1 133 0 2024 107 45 3 chr17 29836299 29836589 -59667964 + AluSg SINE Alu 1 302 -8 2305 110 13 0 chr17 29836595 29836894 -59667659 + AluSx SINE Alu 3 305 -7 511 338 104 45 chr17 29837044 29837867 -59666686 + L2 LINE L2 2188 3059 -213 693 101 10 0 chr17 29837980 29838079 -59666474 + HY3 scRNA scRNA 1 100 -1 219 69 0 0 chr17 29838079 29838108 -59666445 + (A)n Simple_repeat Simple_repeat 1 29 0 1167 159 0 0 chr17 29838113 29838283 -59666270 - AluSg/x SINE Alu -12 300 131 360 0 0 0 chr17 29838283 29838323 -59666230 + (TG)n Simple_repeat Simple_repeat 1 40 0 248 91 0 0 chr17 29838336 29838369 -59666184 - Alu SINE Alu -34 268 236 1431 174 3 69 chr17 29838469 29838627 -59665926 - AluJo SINE Alu -27 285 155 2340 106 3 0 chr17 29838627 29838929 -59665624 - AluSp SINE Alu -10 303 1 1431 174 3 69 chr17 29838929 29839075 -59665478 - AluJo SINE Alu -157 155 1 288 274 26 17 chr17 29839092 29839209 -59665344 + (TG)n Simple_repeat Simple_repeat 1 118 0 321 274 26 18 chr17 29839275 29839388 -59665165 + MIR3 SINE MIR 90 203 -5 2099 125 3 3 chr17 29840220 29840515 -59664038 - AluSx SINE Alu -17 295 1 1823 159 0 72 chr17 29840533 29840866 -59663687 - AluJb SINE Alu -1 311 3 189 278 93 0 chr17 29840921 29840975 -59663578 - MIR SINE MIR -138 124 66 349 323 106 14 chr17 29840994 29841211 -59663342 - MIR SINE MIR -6 256 20 317 260 31 31 chr17 29841368 29841464 -59663089 - MIR SINE MIR -88 174 79 2292 103 7 3 chr17 29841583 29841893 -59662660 + AluSx SINE Alu 1 311 -1 277 294 7 119 chr17 29841982 29842046 -59662507 - L2 LINE L2 -208 3064 3023 1943 140 27 0 chr17 29842046 29842338 -59662215 + AluJb SINE Alu 6 305 -7 277 294 7 119 chr17 29842338 29842416 -59662137 - L2 LINE L2 -249 3023 2938 200 81 81 0 chr17 29842927 29842964 -59661589 + A-rich Low_complexity Low_complexity 3 42 0 890 143 0 27 chr17 29844007 29844154 -59660399 + FLAM_C SINE Alu 1 143 0 707 200 24 0 chr17 29844821 29844946 -59659607 + FLAM_A SINE Alu 1 128 -5 2410 97 0 3 chr17 29844950 29845260 -59659293 + AluSx SINE Alu 1 309 -3 1681 150 23 39 chr17 29845273 29845420 -59659133 + AluJb SINE Alu 9 157 -155 2056 109 0 0 chr17 29845420 29845687 -59658866 + AluSx SINE Alu 34 300 -12 1681 150 23 39 chr17 29845687 29845845 -59658708 + AluJb SINE Alu 157 309 -3 2537 84 0 0 chr17 29847486 29847797 -59656756 + AluY SINE Alu 1 311 0 324 210 36 149 chr17 29848350 29848545 -59656008 + MIR SINE MIR 69 241 -21 2745 39 0 0 chr17 29850255 29850560 -59653993 + AluY SINE Alu 1 305 -6 901 188 7 7 chr17 29850601 29850755 -59653798 - FRAM SINE Alu -24 152 1 285 211 90 83 chr17 29850761 29850894 -59653659 - L2 LINE L2 -16 3297 3164 496 47 0 93 chr17 29850895 29850981 -59653572 - MER2 DNA MER2_type -137 208 131 1646 147 16 42 chr17 29851112 29851286 -59653267 - AluJb SINE Alu -8 304 140 2293 103 3 3 chr17 29851286 29851588 -59652965 - AluSp SINE Alu -9 304 3 1646 147 16 42 chr17 29851588 29851725 -59652828 - AluJb SINE Alu -172 140 1 267 250 15 0 chr17 29851725 29851793 -59652760 + MER2 DNA MER2_type 272 340 -5 1355 174 87 47 chr17 29851831 29852130 -59652423 - AluJb SINE Alu -1 311 1 2251 68 39 0 chr17 29852136 29852416 -59652137 - AluY SINE Alu -20 291 1 1476 193 0 85 chr17 29852443 29852599 -59651954 - AluJb SINE Alu -23 289 121 2254 108 16 0 chr17 29852599 29852906 -59651647 - AluSq SINE Alu -1 312 1 1476 193 0 85 chr17 29852906 29852961 -59651592 - AluJb SINE Alu -191 121 63 195 42 0 0 chr17 29852961 29852985 -59651568 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2055 88 0 4 chr17 29852990 29853251 -59651302 - AluSq SINE Alu -53 260 1 1476 193 0 85 chr17 29853251 29853348 -59651205 - AluJb SINE Alu -253 59 1 2107 119 0 0 chr17 29853359 29853662 -59650891 - AluSg SINE Alu 0 304 2 2432 81 7 0 chr17 29854824 29855122 -59649431 - AluSp SINE Alu -13 300 1 2590 63 0 0 chr17 29855128 29855431 -59649122 - AluSq SINE Alu -8 305 3 2654 43 3 0 chr17 29856063 29856368 -59648185 + AluY SINE Alu 1 306 -5 1912 147 6 31 chr17 29856368 29856504 -59648049 + AluJb SINE Alu 2 140 -172 2140 128 3 7 chr17 29856504 29856802 -59647751 + AluSx SINE Alu 1 297 -15 2465 77 3 0 chr17 29856805 29857115 -59647438 + AluY SINE Alu 1 311 0 1912 147 6 31 chr17 29857115 29857293 -59647260 + AluJb SINE Alu 142 312 0 2231 127 0 0 chr17 29857299 29857606 -59646947 + AluY SINE Alu 1 307 -4 2496 70 0 0 chr17 29857607 29857905 -59646648 + AluY SINE Alu 1 298 -13 896 184 17 40 chr17 29857905 29858079 -59646474 + AluSg/x SINE Alu 134 303 -9 1342 167 87 47 chr17 29858085 29858384 -59646169 + AluJb SINE Alu 1 311 -1 294 268 0 0 chr17 29858420 29858491 -59646062 - MER2 DNA MER2_type -3 342 272 848 175 7 0 chr17 29858491 29858628 -59645925 + AluJo SINE Alu 1 138 -174 2277 102 16 0 chr17 29858628 29858932 -59645621 + AluSx SINE Alu 2 310 -2 2089 129 0 22 chr17 29858998 29859315 -59645238 + AluSg SINE Alu 1 310 0 2490 74 0 0 chr17 29859318 29859629 -59644924 + AluY SINE Alu 1 309 -2 346 225 56 0 chr17 29859680 29859751 -59644802 + AluJ/FLAM SINE Alu 3 77 -225 272 200 0 55 chr17 29859751 29859806 -59644747 + L2 LINE L2 3221 3272 0 230 323 91 0 chr17 29859829 29859928 -59644625 - MLT1L LTR MaLR -221 394 287 388 292 83 7 chr17 29859933 29860077 -59644476 - MLT1K LTR MaLR -356 232 78 2023 101 10 0 chr17 29860166 29860454 -59644099 + AluSg SINE Alu 3 293 -17 2515 64 0 0 chr17 29860603 29860914 -59643639 - AluY SINE Alu 0 311 1 2023 120 20 3 chr17 29861701 29862002 -59642551 + AluSx SINE Alu 1 306 -6 946 161 0 42 chr17 29862002 29862170 -59642383 + AluJb SINE Alu 134 294 -18 253 284 20 49 chr17 29862172 29862274 -59642279 + L2 LINE L2 2380 2478 -836 227 274 18 26 chr17 29862278 29862391 -59642162 + L1ME3A LINE L1 6043 6154 -16 354 150 0 0 chr17 29862441 29862501 -59642052 - Alu SINE Alu 0 302 243 2179 86 31 66 chr17 29862534 29862884 -59641669 - LTR12 LTR ERV1 0 714 377 392 252 35 0 chr17 29862884 29862999 -59641554 - LTR30 LTR ERV1 -79 643 525 2768 209 89 10 chr17 29863002 29863227 -59641326 - L1ME3A LINE L1 -15 6155 5949 2162 109 0 7 chr17 29863227 29863529 -59641024 - AluSx SINE Alu -9 303 4 1317 182 66 42 chr17 29863533 29863819 -59640734 - AluJb SINE Alu -19 293 1 2768 209 89 10 chr17 29863819 29864297 -59640256 - L1ME3A LINE L1 -223 5947 5391 1043 276 40 21 chr17 29864299 29864849 -59639704 - MLT1G1 LTR MaLR 0 555 1 259 226 62 110 chr17 29864874 29865020 -59639533 - L1ME3A LINE L1 -813 5333 5195 994 164 24 0 chr17 29865020 29865185 -59639368 - AluJo/FRAM SINE Alu -10 302 134 2132 99 3 3 chr17 29865185 29865478 -59639075 - AluSq SINE Alu -20 293 1 652 214 73 66 chr17 29865489 29865695 -59638858 - L1ME3A LINE L1 -990 5156 4946 1846 123 45 14 chr17 29865695 29865852 -59638701 - AluSg SINE Alu -9 301 129 2286 89 0 3 chr17 29865852 29866155 -59638398 - AluY SINE Alu -9 302 1 1846 123 45 14 chr17 29866155 29866289 -59638264 - AluSg SINE Alu -181 129 1 652 214 73 66 chr17 29866289 29866371 -59638182 - L1ME3A LINE L1 -1200 4946 4866 839 259 161 14 chr17 29866378 29866905 -59637648 + L2 LINE L2 2696 3311 -2 362 376 0 0 chr17 29866891 29867016 -59637537 - MIR SINE MIR -120 142 18 * 900 152 0 0 chr17 29867102 29867234 -59637319 - FLAM_A SINE Alu -1 132 1 198 296 70 56 chr17 29869728 29869870 -59634683 - MIR SINE MIR -29 233 90 235 291 154 9 chr17 29873519 29873629 -59630924 + L2 LINE L2 3188 3313 0 272 188 14 0 chr17 29875130 29875199 -59629354 + GA-rich Low_complexity Low_complexity 1 70 0 186 205 0 0 chr17 29876469 29876508 -59628045 + L2 LINE L2 3017 3055 -217 184 304 53 53 chr17 29877285 29877456 -59627097 - L2 LINE L2 -51 3262 3092 1974 128 3 7 chr17 29877474 29877771 -59626782 - AluSq SINE Alu -17 296 1 2250 109 0 0 chr17 29877774 29878077 -59626476 - AluSg SINE Alu -7 303 1 2502 50 0 0 chr17 29878526 29878824 -59625729 - AluY SINE Alu -12 299 2 1851 135 0 58 chr17 29878995 29879320 -59625233 - AluJb SINE Alu -6 306 1 208 226 161 0 chr17 29879585 29879647 -59624906 - L2 LINE L2 -650 2664 2593 772 183 122 61 chr17 29879673 29879870 -59624683 + MER3 DNA MER1_type 1 209 0 1976 78 67 0 chr17 29880494 29880778 -59623775 - AluY SINE Alu -8 303 1 2026 140 0 0 chr17 29880790 29881090 -59623463 - AluSx SINE Alu -12 300 1 323 264 57 14 chr17 29883442 29883582 -59620971 + MIR SINE MIR 29 174 -88 240 378 0 0 chr17 29883939 29884029 -59620524 + MIR SINE MIR 30 119 -89 699 127 8 17 chr17 29884510 29884628 -59619925 + FLAM_A SINE Alu 26 142 0 211 359 13 13 chr17 29884863 29884941 -59619612 - L2 LINE L2 -6 3307 3230 1235 229 110 27 chr17 29885100 29885275 -59619278 + L2 LINE L2 2757 2916 -397 1882 120 3 45 chr17 29885275 29885465 -59619088 - AluSx SINE Alu -16 296 122 2349 78 7 0 chr17 29885465 29885773 -59618780 - AluSg SINE Alu 0 310 1 1882 120 3 45 chr17 29885773 29885891 -59618662 - AluSx SINE Alu -190 122 1 1235 229 110 27 chr17 29885891 29886232 -59618321 + L2 LINE L2 2916 3309 -4 687 214 24 36 chr17 29887314 29887482 -59617071 + MIR SINE MIR 45 210 -52 335 324 106 26 chr17 29887505 29888014 -59616539 + L2 LINE L2 2556 3111 -161 621 59 10 30 chr17 29889210 29889311 -59615242 + (TTCC)n Simple_repeat Simple_repeat 1 99 0 2054 139 3 0 chr17 29889316 29889626 -59614927 - AluSq SINE Alu -2 311 1 200 298 67 48 chr17 29890039 29890143 -59614410 - L2 LINE L2 -22 3250 3145 193 319 148 0 chr17 29890467 29890602 -59613951 - MIR3 SINE MIR -33 175 21 1614 146 34 17 chr17 29893733 29894027 -59610526 - AluJb SINE Alu -13 299 1 498 226 0 151 chr17 29894626 29894838 -59609715 - MER5A DNA MER1_type 0 189 10 1911 149 0 0 chr17 29894988 29895298 -59609255 - AluJb SINE Alu 0 310 1 425 341 16 4 chr17 29897580 29897742 -59606811 + MIR3 SINE MIR 3 165 -68 2395 54 7 0 chr17 29899798 29900094 -59604459 + AluY SINE Alu 1 298 -13 2257 75 0 7 chr17 29900620 29900912 -59603641 + AluSp SINE Alu 3 292 -21 1878 161 0 0 chr17 29901234 29901545 -59603008 + AluY SINE Alu 1 311 0 193 313 0 0 chr17 29901547 29901595 -59602958 + MIR SINE MIR 209 256 -6 553 304 91 60 chr17 29901715 29902431 -59602122 - L2 LINE L2 0 3272 2165 2204 96 0 3 chr17 29903046 29903339 -59601214 - AluSq SINE Alu -21 292 1 188 235 0 59 chr17 29904015 29904066 -59600487 + MIR SINE MIR 106 153 -109 1982 96 0 27 chr17 29906299 29906623 -59597930 + AluSx SINE Alu 6 312 0 2240 91 0 0 chr17 29907418 29907704 -59596849 - AluSc SINE Alu -23 286 1 2202 90 0 34 chr17 29907705 29908027 -59596526 - AluY SINE Alu 0 311 1 1309 178 82 32 chr17 29908029 29908310 -59596243 - AluJb SINE Alu -17 295 1 1192 187 4 26 chr17 29909007 29909237 -59595316 - AluJo SINE Alu -87 225 1 998 256 125 65 chr17 29909375 29909642 -59594911 + L1MC4a LINE L1 5566 5816 -1992 1420 157 138 8 chr17 29909642 29909903 -59594650 + AluJo SINE Alu 1 295 -17 998 256 125 65 chr17 29909903 29910186 -59594367 + L1MC4a LINE L1 5816 6149 -1659 2234 121 19 3 chr17 29910219 29910526 -59594027 + AluSx SINE Alu 1 312 0 2522 89 0 0 chr17 29911513 29911815 -59592738 + AluSx SINE Alu 1 302 -10 293 324 44 15 chr17 29911980 29912116 -59592437 + MIR3 SINE MIR 6 145 -63 294 291 93 55 chr17 29912460 29912697 -59591856 + MIR3 SINE MIR 7 252 -10 1075 245 114 44 chr17 29914400 29914673 -59589880 + MLT1H1 LTR MaLR 1 254 -301 2211 142 0 0 chr17 29914673 29914969 -59589584 + AluSx SINE Alu 1 296 -16 1075 245 114 44 chr17 29914969 29915214 -59589339 + MLT1H1 LTR MaLR 254 555 0 1652 130 27 0 chr17 29915399 29915660 -59588893 + AluSq SINE Alu 56 322 0 2143 100 0 0 chr17 29915660 29915930 -59588623 + AluSg SINE Alu 1 270 -40 366 146 16 0 chr17 29916030 29916104 -59588449 - AluS SINE Alu -242 61 1 217 327 58 45 chr17 29916662 29916818 -59587735 + L2 LINE L2 2896 3053 -219 258 324 14 0 chr17 29916892 29916963 -59587590 + L2 LINE L2 3186 3257 -15 1949 146 36 3 chr17 29917334 29917635 -59586918 + AluJb SINE Alu 1 311 -1 2453 83 0 3 chr17 29917803 29918103 -59586450 - AluSx SINE Alu -13 299 1 2239 120 0 0 chr17 29918128 29918428 -59586125 - AluSx SINE Alu -12 300 1 1963 154 0 7 chr17 29918681 29918980 -59585573 - AluJb SINE Alu -15 297 1 2154 129 14 0 chr17 29919210 29919505 -59585048 + AluSx SINE Alu 1 299 -13 341 283 253 6 chr17 29919873 29920039 -59584514 - MIR SINE MIR -50 212 6 1794 177 10 0 chr17 29920314 29920602 -59583951 + AluJb SINE Alu 1 291 -21 212 311 66 0 chr17 29920630 29920691 -59583862 - L2 LINE L2 0 3313 3249 2190 109 33 10 chr17 29921142 29921446 -59583107 - AluSx SINE Alu 0 312 2 2148 121 0 0 chr17 29921803 29922118 -59582435 - AluSx SINE Alu 0 315 1 202 273 0 30 chr17 29922857 29922923 -59581630 + GA-rich Low_complexity Low_complexity 2 65 0 29 0 0 0 chr17 29923668 29923697 -59580856 + AT_rich Low_complexity Low_complexity 1 29 0 2311 108 3 0 chr17 29924778 29925074 -59579479 - AluSg SINE Alu -13 297 1 2103 100 28 14 chr17 29928164 29928453 -59576100 - AluSq SINE Alu -20 293 1 1525 158 4 23 chr17 29928821 29929080 -59575473 + AluJo SINE Alu 43 296 -16 2318 104 0 0 chr17 29929082 29929406 -59575147 + AluSg SINE Alu 1 324 0 2174 166 51 28 chr17 29929413 29929899 -59574654 + L1MB8 LINE L1 5190 5691 -493 2157 135 3 0 chr17 29929899 29930229 -59574324 + AluSq SINE Alu 6 313 0 2174 166 51 28 chr17 29930229 29930287 -59574266 + L1MB8 LINE L1 5691 5746 -438 563 151 40 16 chr17 29930387 29930513 -59574040 + L1MB8 LINE L1 5748 5876 -302 847 145 0 0 chr17 29931191 29931315 -59573238 + AluSg/x SINE Alu 181 304 -6 186 43 0 0 chr17 29931354 29931377 -59573176 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1068 185 162 8 chr17 29931637 29931896 -59572657 + AluJo SINE Alu 1 299 -3 2307 91 14 7 chr17 29932498 29932795 -59571758 + AluSg SINE Alu 1 299 -11 736 154 0 37 chr17 29933347 29933483 -59571070 - FLAM_C SINE Alu -1 132 2 411 258 148 19 chr17 29938143 29938298 -59566255 - MIR3 SINE MIR -4 204 30 1577 183 14 11 chr17 29939876 29940155 -59564398 + AluJb SINE Alu 27 306 -6 234 0 0 0 chr17 29940267 29940293 -59564260 + (T)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr17 29941575 29941596 -59562957 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 364 252 108 7 chr17 29943196 29943335 -59561218 - MIR SINE MIR -87 175 23 1956 143 33 0 chr17 29943929 29944230 -59560323 + AluSx SINE Alu 1 311 -1 192 272 148 0 chr17 29944245 29944326 -59560227 - L3b LINE CR1 -221 1362 1270 309 318 0 0 chr17 29945508 29945596 -59558957 + L2 LINE L2 3185 3272 0 189 255 39 0 chr17 29946659 29946710 -59557843 + MIR SINE MIR 64 116 -92 365 321 109 36 chr17 29947418 29947890 -59556663 + L2 LINE L2 2709 3218 -54 2370 96 0 7 chr17 29947920 29948223 -59556330 + AluSx SINE Alu 1 301 -11 2549 70 0 0 chr17 29948266 29948568 -59555985 + AluY SINE Alu 1 302 -9 242 352 137 20 chr17 29948893 29949251 -59555302 + L2 LINE L2 2870 3269 -3 212 340 90 21 chr17 29950053 29950241 -59554312 + L2 LINE L2 3110 3310 -3 374 244 83 18 chr17 29950748 29950915 -59553638 + MIR SINE MIR 3 191 -62 2346 78 7 0 chr17 29951189 29951482 -59553071 + AluSp SINE Alu 1 295 -18 2382 90 0 10 chr17 29951483 29951794 -59552759 + AluSq SINE Alu 1 308 -5 1535 180 11 11 chr17 29951814 29952081 -59552472 + AluJo SINE Alu 45 311 -1 2101 103 0 14 chr17 29952272 29952553 -59552000 + AluSx SINE Alu 3 279 -33 298 0 48 0 chr17 29952560 29952602 -59551951 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 2106 103 17 31 chr17 29952612 29952904 -59551649 + AluSg SINE Alu 1 288 -22 590 286 65 5 chr17 29953354 29953571 -59550982 + MIR SINE MIR 2 231 -31 238 259 156 22 chr17 29953702 29953837 -59550716 - MIR SINE MIR -98 164 12 197 294 69 25 chr17 29954029 29954161 -59550392 - MIR SINE MIR -5 257 120 498 291 132 6 chr17 29955401 29955583 -59548970 - MIR SINE MIR -38 224 20 403 303 90 7 chr17 29955755 29955900 -59548653 + L2 LINE L2 3116 3272 0 237 296 34 11 chr17 29956557 29956645 -59547908 - MIR SINE MIR -86 122 33 219 202 11 124 chr17 29956674 29956763 -59547790 + MIR3 SINE MIR 104 182 -26 334 332 115 70 chr17 29956897 29957280 -59547273 + L2 LINE L2 2422 2821 -493 292 290 137 46 chr17 29957504 29957635 -59546918 + MIR3 SINE MIR 2 144 -64 442 226 15 0 chr17 29957650 29957723 -59546830 + MER5A DNA MER1_type 4 81 -108 2531 82 0 0 chr17 29957723 29958027 -59546526 + AluSp SINE Alu 1 304 -9 442 226 15 0 chr17 29958027 29958060 -59546493 + MER5A DNA MER1_type 81 112 -77 350 278 120 0 chr17 29959010 29959118 -59545435 + L3 LINE CR1 1455 1575 -2 301 253 81 10 chr17 29959515 29959646 -59544907 - MIR SINE MIR -44 218 75 350 326 26 47 chr17 29960913 29961107 -59543446 - MIR SINE MIR -56 206 19 634 270 98 0 chr17 29961294 29961498 -59543055 + MIR SINE MIR 20 243 -19 380 358 40 6 chr17 29961771 29961947 -59542606 - MIR3 SINE MIR -26 182 1 519 254 179 46 chr17 29963247 29963487 -59541066 + L2 LINE L2 2997 3268 -4 222 295 0 0 chr17 29963508 29963569 -59540984 + MIR SINE MIR 75 135 -73 355 318 182 41 chr17 29964783 29965534 -59539019 - L2 LINE L2 -100 3172 2302 236 405 16 8 chr17 29965621 29965747 -59538806 + L2 LINE L2 3132 3258 -14 195 42 0 0 chr17 29965748 29965772 -59538781 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 405 0 0 0 chr17 29966294 29966339 -59538214 + (TG)n Simple_repeat Simple_repeat 1 45 0 1007 76 8 0 chr17 29966428 29966559 -59537994 - AluY SINE Alu -179 132 1 342 289 26 77 chr17 29966560 29966607 -59537946 - MIR SINE MIR -55 207 159 2222 111 3 9 chr17 29966607 29966785 -59537768 - AluSq SINE Alu 0 313 136 2258 75 7 3 chr17 29966785 29967080 -59537473 - AluY SINE Alu -15 296 1 2222 111 3 9 chr17 29967080 29967216 -59537337 - AluSq SINE Alu -177 136 1 342 289 26 77 chr17 29967216 29967313 -59537240 - MIR SINE MIR -103 159 73 2157 115 0 0 chr17 29967313 29967608 -59536945 - AluSx SINE Alu -17 295 1 342 289 26 77 chr17 29967608 29967656 -59536897 - MIR SINE MIR -189 73 24 285 98 0 0 chr17 29967797 29967838 -59536715 + (TGG)n Simple_repeat Simple_repeat 3 43 0 448 282 53 0 chr17 29968638 29968808 -59535745 - MER117 DNA MER1_type -17 180 2 339 238 129 10 chr17 29968823 29968924 -59535629 - MIR SINE MIR -62 146 34 1604 145 25 63 chr17 29969061 29969378 -59535175 - AluJb SINE Alu -7 305 1 511 238 28 28 chr17 29969482 29969625 -59534928 + MIR SINE MIR 3 145 -117 384 268 30 30 chr17 29969769 29969937 -59534616 - MER117 DNA MER1_type -29 168 1 380 87 43 14 chr17 29971471 29971540 -59533013 - MADE1 DNA Mariner -1 79 9 288 256 47 39 chr17 29971550 29971679 -59532874 - L1ME LINE L1 -460 5661 5532 360 0 0 0 chr17 29972426 29972466 -59532087 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr17 29972996 29973031 -59531522 + GC_rich Low_complexity Low_complexity 1 35 0 1920 146 0 3 chr17 29973294 29973595 -59530958 - AluSc SINE Alu -9 300 1 1122 44 0 7 chr17 29973595 29973730 -59530823 - AluY SINE Alu -177 134 1 1967 123 3 3 chr17 29973893 29974194 -59530359 - AluY SINE Alu -10 301 1 2007 115 0 3 chr17 29974370 29974656 -59529897 - AluSc SINE Alu -24 285 1 1146 37 0 7 chr17 29974656 29974791 -59529762 - AluY SINE Alu -177 134 1 2328 73 3 3 chr17 29974954 29975255 -59529298 - AluY SINE Alu -10 301 1 342 220 0 0 chr17 29975331 29975431 -59529122 + (TG)n Simple_repeat Simple_repeat 1 100 0 180 362 19 38 chr17 29975555 29975660 -59528893 - MIR3 SINE MIR -45 163 61 817 83 33 16 chr17 29976085 29976206 -59528347 - Alu SINE Alu -10 300 178 295 172 16 16 chr17 29976345 29976409 -59528144 - MER117 DNA MER1_type -133 64 1 380 323 99 37 chr17 29977826 29978040 -59526513 - MIR SINE MIR -37 225 3 209 295 77 0 chr17 29978086 29978164 -59526389 - MIR SINE MIR -72 136 53 412 231 58 10 chr17 29978322 29978426 -59526127 + MIR SINE MIR 36 144 -118 345 317 24 0 chr17 29979374 29979499 -59525054 - MIR SINE MIR -61 147 38 310 245 57 28 chr17 29979593 29979699 -59524854 + MIR SINE MIR 38 146 -62 298 264 38 28 chr17 29980431 29980537 -59524016 - MIR SINE MIR -61 147 41 553 298 76 18 chr17 29980579 29980804 -59523749 - MIR SINE MIR -12 250 13 212 319 50 21 chr17 29980997 29981138 -59523415 + L2 LINE L2 2911 3055 -217 283 227 173 0 chr17 29981656 29981766 -59522787 - MIR3 SINE MIR -22 186 58 231 297 68 0 chr17 29981836 29981910 -59522643 - L3 LINE CR1 -113 1464 1386 242 376 194 0 chr17 29981953 29982123 -59522430 + MIR3 SINE MIR 3 205 -3 496 277 138 20 chr17 29982164 29982359 -59522194 - MIR SINE MIR -14 248 31 23 33 0 0 chr17 29982391 29982421 -59522132 + AT_rich Low_complexity Low_complexity 1 30 0 1646 106 8 4 chr17 29982460 29982671 -59521882 + LTR8A LTR ERV1 1 215 -512 2053 128 0 31 chr17 29982671 29982992 -59521561 + AluSq SINE Alu 1 311 -2 1646 106 8 4 chr17 29982992 29983045 -59521508 + LTR8A LTR ERV1 215 266 -461 850 125 0 0 chr17 29983147 29983267 -59521286 + AluSg/x SINE Alu 182 301 -9 249 315 33 22 chr17 29983287 29983379 -59521174 - MIR SINE MIR -76 132 40 216 243 0 0 chr17 29985124 29985198 -59519355 + (CA)n Simple_repeat Simple_repeat 2 75 0 357 330 99 19 chr17 29985232 29985444 -59519109 + MIR SINE MIR 27 255 -7 318 148 0 0 chr17 29985980 29986034 -59518519 - MER3 DNA MER1_type -1 208 155 2336 71 0 3 chr17 29986034 29986331 -59518222 + AluSx SINE Alu 1 296 -16 2066 118 11 0 chr17 29986335 29986622 -59517931 + AluSx SINE Alu 1 290 -22 23 0 0 0 chr17 29986622 29986645 -59517908 + AT_rich Low_complexity Low_complexity 1 23 0 287 282 136 0 chr17 29988357 29988460 -59516093 - MIR3 SINE MIR -78 130 14 285 98 0 0 chr17 29988648 29988689 -59515864 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 187 79 53 0 chr17 29989661 29989699 -59514854 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 477 286 23 0 chr17 29990603 29990736 -59513817 + MIR SINE MIR 127 262 0 424 287 112 7 chr17 29990872 29991015 -59513538 + MIR SINE MIR 64 221 -41 259 211 113 14 chr17 29991462 29991533 -59513020 - L2 LINE L2 0 3313 3236 292 339 46 8 chr17 29992092 29992222 -59512331 - L2 LINE L2 -237 3035 2901 209 246 35 0 chr17 29993546 29993603 -59510950 - MIR SINE MIR -82 126 68 360 0 0 0 chr17 29995652 29995692 -59508861 + (TG)n Simple_repeat Simple_repeat 2 41 0 29 70 0 0 chr17 29996222 29996279 -59508274 + GC_rich Low_complexity Low_complexity 1 57 0 218 167 0 0 chr17 29996553 29996589 -59507964 + (CCG)n Simple_repeat Simple_repeat 2 37 0 182 36 0 36 chr17 29997413 29997441 -59507112 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1608 150 40 25 chr17 29997443 29997717 -59506836 - AluJo SINE Alu -30 282 5 515 296 117 0 chr17 29999254 29999416 -59505137 + L2 LINE L2 3090 3270 -2 22 0 0 0 chr17 29999568 29999590 -59504963 + AT_rich Low_complexity Low_complexity 1 22 0 1776 181 0 0 chr17 29999590 29999877 -59504676 - AluJb SINE Alu -25 287 1 211 324 203 0 chr17 30002430 30002578 -59501975 - L2 LINE L2 -267 3005 2828 200 306 0 56 chr17 30002701 30002773 -59501780 - L2 LINE L2 0 3313 3246 2246 114 7 0 chr17 30003629 30003935 -59500618 + AluSx SINE Alu 1 308 -4 290 269 269 2 chr17 30003957 30004136 -59500417 + MIR SINE MIR 24 241 -21 643 265 67 49 chr17 30004268 30004491 -59500062 + MIR SINE MIR 5 231 -31 181 349 0 0 chr17 30004741 30004804 -59499749 + MIR SINE MIR 190 252 -10 969 204 122 13 chr17 30004837 30005067 -59499486 - MIR SINE MIR -1 261 7 186 325 57 24 chr17 30005903 30006026 -59498527 - L3 LINE CR1 -38 1539 1413 * 204 286 162 9 chr17 30006025 30006130 -59498423 + L2 LINE L2 3191 3311 -2 1268 148 0 30 chr17 30006324 30006511 -59498042 - AluJb SINE Alu 0 317 136 2330 79 0 0 chr17 30006511 30006814 -59497739 - AluY SINE Alu -8 303 1 1268 148 0 30 chr17 30006814 30006862 -59497691 - AluJb SINE Alu -181 136 88 181 271 51 0 chr17 30006862 30006921 -59497632 - MIR SINE MIR -73 135 74 793 312 17 8 chr17 30007821 30008058 -59496495 - MIR SINE MIR -12 250 12 314 340 122 0 chr17 30008568 30008715 -59495838 + MIR SINE MIR 90 254 -8 2172 100 17 0 chr17 30008821 30009110 -59495443 - AluSg SINE Alu -16 294 1 238 326 42 0 chr17 30009687 30009782 -59494771 - MIR SINE MIR -133 129 31 424 336 40 7 chr17 30009873 30010022 -59494531 + L3b LINE CR1 1306 1459 -124 232 262 87 24 chr17 30010123 30010249 -59494304 - HAL1 LINE L1 -1 2506 2373 542 240 0 11 chr17 30010270 30010423 -59494130 - L1MC4a LINE L1 -1843 5965 5816 561 237 59 89 chr17 30011553 30011789 -59492764 + MER102b DNA MER1_type 111 339 -2 195 114 29 0 chr17 30011812 30011847 -59492706 - MIR SINE MIR -125 137 102 258 176 0 0 chr17 30011879 30011930 -59492623 + T-rich Low_complexity Low_complexity 1 51 0 256 114 0 45 chr17 30013072 30013116 -59491437 - MIR SINE MIR -61 147 106 25 0 0 0 chr17 30013624 30013649 -59490904 + AT_rich Low_complexity Low_complexity 1 25 0 234 238 35 91 chr17 30013810 30013953 -59490600 - L1ME4a LINE L1 -46 6075 5941 406 87 43 14 chr17 30014280 30014349 -59490204 - MADE1 DNA Mariner -1 79 9 333 237 79 40 chr17 30014359 30014511 -59490042 - L1MC4a LINE L1 -460 5661 5504 2508 69 0 10 chr17 30015748 30016051 -59488502 + AluY SINE Alu 1 300 -11 498 221 14 21 chr17 30016288 30016471 -59488082 + MIR SINE MIR 14 241 -21 634 233 8 0 chr17 30016836 30016965 -59487588 - FLAM_A SINE Alu -2 131 2 647 94 0 72 chr17 30016972 30017031 -59487522 - L1MA7 LINE L1 0 6291 6229 1755 152 30 26 chr17 30017031 30017333 -59487220 - AluJo SINE Alu -9 303 1 647 94 0 72 chr17 30017333 30017411 -59487142 - L1MA7 LINE L1 -62 6229 6164 405 175 8 108 chr17 30017411 30017463 -59487090 + L1MA9 LINE L1 5925 5960 -352 2194 96 21 7 chr17 30017463 30017754 -59486799 + AluSq SINE Alu 1 295 -18 405 175 8 108 chr17 30017754 30017821 -59486732 + L1MA9 LINE L1 5960 6032 -280 369 0 0 0 chr17 30018766 30018807 -59485746 + (CA)n Simple_repeat Simple_repeat 2 42 0 1701 129 85 11 chr17 30019543 30019814 -59484739 - AluJb SINE Alu -21 291 1 1683 127 49 102 chr17 30019860 30020239 -59484314 - L1MB3 LINE L1 0 6183 5830 1593 113 32 0 chr17 30020239 30020460 -59484093 - AluJb SINE Alu 0 312 85 1683 127 49 102 chr17 30020460 30020530 -59484023 - L1MB3 LINE L1 -353 5830 5758 2484 60 3 0 chr17 30020549 30020847 -59483706 - AluY SINE Alu -12 299 1 362 285 59 38 chr17 30021104 30021290 -59483263 - MARNA DNA Mariner -353 233 44 802 130 0 0 chr17 30021651 30021766 -59482787 - AluSp/q SINE Alu -14 299 185 1758 89 0 13 chr17 30021766 30021991 -59482562 - AluSq SINE Alu -91 222 1 2247 132 0 7 chr17 30022003 30022313 -59482240 - AluSx SINE Alu -4 308 1 324 205 0 64 chr17 30023106 30023184 -59481369 + MIR SINE MIR 120 192 -70 743 212 53 0 chr17 30024501 30024652 -59479901 - MLT1H1 LTR MaLR -53 502 344 498 148 0 11 chr17 30024652 30024740 -59479813 - FLAM SINE Alu -19 124 38 495 244 222 60 chr17 30024790 30024865 -59479688 - MLT1H1 LTR MaLR -281 274 213 2272 105 0 3 chr17 30024865 30025161 -59479392 + AluSg SINE Alu 1 295 -15 495 244 222 60 chr17 30025161 30025319 -59479234 - MLT1H1 LTR MaLR -342 213 3 1731 163 10 38 chr17 30025343 30025656 -59478897 + AluJb SINE Alu 1 304 -8 499 279 13 19 chr17 30025703 30025861 -59478692 + MER69A DNA AcHobo 1 157 -20 26 0 0 0 chr17 30027214 30027240 -59477313 + AT_rich Low_complexity Low_complexity 1 26 0 289 318 0 0 chr17 30027629 30027714 -59476839 + MIR3 SINE MIR 118 202 -6 1314 189 25 13 chr17 30027885 30028123 -59476430 - AluJo SINE Alu -19 293 53 267 313 94 43 chr17 30028867 30029196 -59475357 + L1MEd LINE L1 49 394 -5725 588 308 111 39 chr17 30029197 30029888 -59474665 + L1MEd LINE L1 512 1252 -4867 742 189 0 0 chr17 30030199 30030397 -59474156 - FLAM_A SINE Alu 0 208 11 232 170 43 0 chr17 30031910 30031957 -59472596 + L1P3 LINE L1 5774 5822 -350 570 307 28 20 chr17 30032480 30032731 -59471822 - L2 LINE L2 -469 2845 2593 183 273 158 29 chr17 30033587 30033726 -59470827 + L3b LINE CR1 1295 1451 -132 362 268 238 12 chr17 30034324 30034488 -59470065 + MIR SINE MIR 29 229 -33 547 254 103 16 chr17 30034703 30034888 -59469665 + MIR SINE MIR 26 226 -36 2177 93 0 28 chr17 30034944 30035267 -59469286 + AluSx SINE Alu 1 315 0 1476 195 52 24 chr17 30035407 30035735 -59468818 - MER58B DNA MER1_type -1 340 4 209 360 128 24 chr17 30035741 30035905 -59468648 - L3b LINE CR1 -24 1559 1379 206 351 213 13 chr17 30035987 30036212 -59468341 - L3b LINE CR1 -202 1381 1112 203 146 24 0 chr17 30038064 30038105 -59466448 + GA-rich Low_complexity Low_complexity 3 44 0 659 185 15 22 chr17 30038353 30038488 -59466065 + AluJo SINE Alu 2 135 -177 1503 167 56 42 chr17 30038489 30038795 -59465758 + AluJo SINE Alu 2 311 -1 1841 131 69 0 chr17 30038799 30039074 -59465479 + AluSg SINE Alu 1 294 -16 375 208 69 20 chr17 30039739 30039867 -59464686 - MER20B DNA MER1_type -65 154 28 279 261 43 0 chr17 30039922 30040014 -59464539 - MIR SINE MIR -69 139 44 1618 195 0 42 chr17 30040499 30040812 -59463741 - AluJb SINE Alu -12 300 1 737 225 38 80 chr17 30041561 30041732 -59462821 + MIR SINE MIR 12 189 -73 528 101 13 0 chr17 30041732 30041811 -59462742 - MADE1 DNA Mariner 0 80 1 737 225 38 80 chr17 30041811 30041838 -59462715 + MIR SINE MIR 189 216 -46 1885 162 0 7 chr17 30041838 30042149 -59462404 + AluJb SINE Alu 1 309 0 737 225 38 80 chr17 30042149 30042210 -59462343 + MIR SINE MIR 216 262 0 2357 111 3 0 chr17 30044641 30044947 -59459606 + AluSq SINE Alu 1 307 -6 2295 110 0 0 chr17 30045908 30046207 -59458346 + AluSx SINE Alu 1 299 -13 251 272 24 64 chr17 30046246 30046371 -59458182 + MIR SINE MIR 82 201 -61 813 210 42 115 chr17 30046373 30046482 -59458071 - L2 LINE L2 0 3313 3198 3067 136 14 66 chr17 30046482 30046741 -59457812 + L1MB2 LINE L1 5572 5843 -328 1638 130 0 21 chr17 30046741 30046878 -59457675 + AluSx SINE Alu 1 132 -180 2442 87 3 0 chr17 30046878 30047176 -59457377 + AluSc SINE Alu 1 299 -10 1638 130 0 21 chr17 30047176 30047277 -59457276 + AluSx SINE Alu 132 234 -78 3067 136 14 66 chr17 30047277 30047299 -59457254 + L1MB2 LINE L1 5843 5865 -306 314 0 49 0 chr17 30047299 30047340 -59457213 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3067 136 14 66 chr17 30047340 30047690 -59456863 + L1MB2 LINE L1 5865 6171 0 2241 97 0 42 chr17 30047695 30048003 -59456550 - AluSx SINE Alu -17 295 1 813 210 42 115 chr17 30048003 30048244 -59456309 - L2 LINE L2 -119 3194 2983 230 336 81 20 chr17 30049680 30049829 -59454724 + L3b LINE CR1 1331 1488 -95 615 190 15 29 chr17 30050961 30051098 -59453455 + MER5B DNA MER1_type 7 141 -37 307 161 16 140 chr17 30051098 30051284 -59453269 + L1MC5 LINE L1 7549 7711 -250 840 223 0 18 chr17 30051285 30051451 -59453102 + FRAM SINE Alu 1 163 -13 2170 110 0 7 chr17 30051454 30051745 -59452808 + AluSc SINE Alu 1 289 -20 246 62 0 0 chr17 30051750 30051782 -59452771 + (TTTCC)n Simple_repeat Simple_repeat 4 35 0 1290 162 143 33 chr17 30051785 30052057 -59452496 - AluJb SINE Alu 0 302 1 320 243 81 44 chr17 30052062 30052198 -59452355 + L1MC5 LINE L1 7703 7843 -118 27 22 0 22 chr17 30052198 30052227 -59452326 + AT_rich Low_complexity Low_complexity 1 30 -14 2292 91 0 14 chr17 30052227 30052524 -59452029 + AluSx SINE Alu 1 293 -19 27 22 0 22 chr17 30052524 30052539 -59452014 + AT_rich Low_complexity Low_complexity 30 44 0 450 193 0 11 chr17 30052539 30052627 -59451926 - FLAM_A SINE Alu -19 123 37 2277 91 53 14 chr17 30052665 30053026 -59451527 - THE1C LTR MaLR 0 375 1 189 0 0 0 chr17 30054518 30054539 -59450014 + (A)n Simple_repeat Simple_repeat 1 21 0 1660 112 31 31 chr17 30055599 30055765 -59448788 - AluSx SINE Alu -9 303 135 2589 43 0 10 chr17 30055765 30056066 -59448487 - AluY SINE Alu -13 298 1 1660 112 31 31 chr17 30056066 30056159 -59448394 - AluSx SINE Alu -176 136 44 247 287 40 40 chr17 30057075 30057176 -59447377 + MIR SINE MIR 162 262 0 2338 89 0 13 chr17 30057181 30057483 -59447070 - AluSq SINE Alu -15 298 1 306 219 27 0 chr17 30058117 30058190 -59446363 - MIR SINE MIR -111 151 77 271 340 94 0 chr17 30058347 30058559 -59445994 + L3b LINE CR1 1161 1392 -191 182 353 58 14 chr17 30059461 30059600 -59444953 + L2 LINE L2 2915 3059 -213 224 260 180 70 chr17 30059807 30059907 -59444646 + L2 LINE L2 3203 3313 0 207 0 0 0 chr17 30060142 30060165 -59444388 + (T)n Simple_repeat Simple_repeat 1 23 0 2100 129 3 10 chr17 30060183 30060477 -59444076 + AluSx SINE Alu 1 292 -20 279 183 37 0 chr17 30061013 30061095 -59443458 + GA-rich Low_complexity Low_complexity 2 86 0 363 342 106 12 chr17 30063075 30063236 -59441317 - MER5A DNA MER1_type 0 189 14 313 301 180 38 chr17 30064053 30064236 -59440317 - MIR SINE MIR -15 247 39 189 0 0 0 chr17 30064275 30064296 -59440257 + (A)n Simple_repeat Simple_repeat 1 21 0 2182 87 3 7 chr17 30065966 30066255 -59438298 - AluSx SINE Alu -24 288 1 602 358 25 12 chr17 30067204 30067447 -59437106 + MIR SINE MIR 13 258 -4 243 0 0 0 chr17 30071472 30071499 -59433054 + (CA)n Simple_repeat Simple_repeat 1 27 0 185 159 23 0 chr17 30072120 30072164 -59432389 + (TG)n Simple_repeat Simple_repeat 1 45 0 420 306 98 6 chr17 30075132 30075305 -59429248 + MIR SINE MIR 28 216 -46 182 372 77 0 chr17 30075676 30075754 -59428799 + MIR3 SINE MIR 119 202 -6 342 250 134 9 chr17 30075877 30075989 -59428564 + MIR SINE MIR 66 191 -71 2425 43 10 3 chr17 30075990 30076293 -59428260 - AluY SINE Alu -6 305 1 1968 150 0 25 chr17 30076701 30077015 -59427538 + AluJb SINE Alu 7 312 0 2010 72 47 11 chr17 30077106 30077385 -59427168 + AluSc SINE Alu 17 305 -4 238 368 0 28 chr17 30077387 30077531 -59427022 + GA-rich Low_complexity Low_complexity 3 142 0 190 339 0 0 chr17 30082416 30082475 -59422078 + L2 LINE L2 3214 3272 0 1832 149 10 10 chr17 30088937 30089239 -59415314 - AluJo SINE Alu -10 302 1 1975 148 0 3 chr17 30089245 30089548 -59415005 - AluSx SINE Alu -10 302 1 218 278 40 33 chr17 30090415 30090566 -59413987 + (CAGAGA)n Simple_repeat Simple_repeat 6 157 0 226 341 12 0 chr17 30091716 30091798 -59412755 - L2 LINE L2 -14 3258 3176 1076 360 163 22 chr17 30091882 30092840 -59411713 - L2 LINE L2 -249 3023 2202 2395 69 26 0 chr17 30092840 30093143 -59411410 + AluY SINE Alu 1 311 0 1076 360 163 22 chr17 30093143 30094190 -59410363 - L2 LINE L2 -1070 2202 739 180 310 14 42 chr17 30095357 30095428 -59409125 + L3 LINE CR1 1398 1466 -111 216 0 0 0 chr17 30095545 30095569 -59408984 + (A)n Simple_repeat Simple_repeat 1 24 0 2014 123 10 7 chr17 30095576 30095876 -59408677 + AluSx SINE Alu 1 301 -11 598 258 91 5 chr17 30095884 30096103 -59408450 + MIR SINE MIR 6 248 -14 440 264 72 30 chr17 30096369 30096536 -59408017 - MIR3 SINE MIR -4 204 31 644 112 28 0 chr17 30097144 30097251 -59407302 + MIR SINE MIR 29 138 -124 620 243 28 44 chr17 30098882 30099063 -59405490 + L2 LINE L2 3127 3304 -9 458 326 9 27 chr17 30100324 30100545 -59404008 - MER102b DNA MER1_type -12 329 113 511 325 64 29 chr17 30102108 30102479 -59402074 - L3 LINE CR1 -25 1552 1123 285 274 57 19 chr17 30106965 30107071 -59397482 + MIR SINE MIR 20 129 -133 299 273 52 0 chr17 30107196 30107273 -59397280 + L2 LINE L2 3171 3251 -21 2241 110 0 13 chr17 30107608 30107918 -59396635 - AluSx SINE Alu -6 306 1 1114 152 0 22 chr17 30107922 30108100 -59396453 - AluJb SINE Alu -7 305 132 2383 71 0 0 chr17 30111821 30112116 -59392437 + AluY SINE Alu 1 295 -16 236 188 0 21 chr17 30114350 30114398 -59390155 + G-rich Low_complexity Low_complexity 6 52 0 434 210 228 0 chr17 30115197 30115359 -59389194 + MER46C DNA MER2_type 13 211 -127 1906 156 6 16 chr17 30118069 30118383 -59386170 + AluJb SINE Alu 1 311 -1 266 254 0 15 chr17 30118407 30118474 -59386079 - MIR SINE MIR 0 262 197 24 0 0 0 chr17 30118482 30118506 -59386047 + AT_rich Low_complexity Low_complexity 1 24 0 486 0 0 0 chr17 30118529 30118583 -59385970 + (CA)n Simple_repeat Simple_repeat 1 54 0 306 180 0 0 chr17 30119348 30119409 -59385144 + (CA)n Simple_repeat Simple_repeat 2 62 0 1861 113 68 3 chr17 30122146 30122438 -59382115 - AluSx SINE Alu -1 311 1 376 268 107 0 chr17 30122442 30122554 -59381999 + MIR3 SINE MIR 81 204 -4 2210 85 0 0 chr17 30122575 30122878 -59381675 - AluSp SINE Alu 0 303 1 2193 88 0 23 chr17 30123149 30123457 -59381096 - AluY SINE Alu -10 301 1 873 121 0 104 chr17 30123879 30124001 -59380552 + L1MA1 LINE L1 6148 6281 -21 1859 151 0 10 chr17 30124001 30124306 -59380247 + AluJb SINE Alu 1 302 -10 222 37 0 0 chr17 30124306 30124333 -59380220 + (TA)n Simple_repeat Simple_repeat 2 28 0 873 121 0 104 chr17 30124333 30124382 -59380171 + L1MA1 LINE L1 6279 6302 0 549 272 60 65 chr17 30124555 30124787 -59379766 - MIR SINE MIR -9 253 23 367 266 243 12 chr17 30125048 30125217 -59379336 - MIR SINE MIR -7 255 48 391 323 30 73 chr17 30125540 30125772 -59378781 + L1ME LINE L1 5573 5773 -348 830 241 10 39 chr17 30126626 30126833 -59377720 - MIR SINE MIR -15 247 47 189 107 0 0 chr17 30128849 30128877 -59375676 + (CA)n Simple_repeat Simple_repeat 2 29 0 720 153 5 138 chr17 30129862 30129994 -59374559 - MER5B DNA MER1_type 0 178 81 2375 38 41 0 chr17 30129994 30130286 -59374267 - AluY SINE Alu -7 304 1 720 153 5 138 chr17 30130286 30130356 -59374197 - MER5B DNA MER1_type -97 81 3 204 40 0 0 chr17 30130405 30130430 -59374123 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 220 200 233 0 chr17 30130432 30130492 -59374061 + MIR SINE MIR 78 151 -111 957 202 34 0 chr17 30130552 30130730 -59373823 + MER5A DNA MER1_type 4 187 -2 680 250 38 59 chr17 30130749 30130865 -59373688 + MIR SINE MIR 1 111 -151 1768 144 7 3 chr17 30130865 30131163 -59373390 - AluSx SINE Alu -13 299 1 680 250 38 59 chr17 30131163 30131282 -59373271 + MIR SINE MIR 111 231 -31 1333 187 0 32 chr17 30131319 30131597 -59372956 - AluJo SINE Alu -43 269 1 513 351 61 9 chr17 30132534 30132765 -59371788 + MIR SINE MIR 20 262 0 23 0 0 0 chr17 30133049 30133072 -59371481 + AT_rich Low_complexity Low_complexity 1 23 0 272 274 44 35 chr17 30133593 30133706 -59370847 + L2 LINE L2 3165 3278 -35 2265 71 0 0 chr17 30134035 30134347 -59370206 + AluSx SINE Alu 4 315 0 642 294 231 17 chr17 30134480 30134952 -59369601 + MLT1K LTR MaLR 2 574 -14 341 286 95 12 chr17 30135035 30135203 -59369350 - MIR SINE MIR -69 193 12 1913 151 0 16 chr17 30135291 30135603 -59368950 + AluJb SINE Alu 1 307 -5 1473 150 75 38 chr17 30135676 30135969 -59368584 + AluJo SINE Alu 1 304 -8 217 221 253 0 chr17 30136229 30136324 -59368229 + L2 LINE L2 1692 1810 -1504 315 0 0 0 chr17 30136639 30136674 -59367879 + (TG)n Simple_repeat Simple_repeat 2 36 0 384 239 11 0 chr17 30137287 30137375 -59367178 + L2 LINE L2 3225 3313 0 299 311 28 0 chr17 30138027 30138133 -59366420 + L3b LINE CR1 1290 1398 -185 264 203 125 0 chr17 30138659 30138680 -59365873 + MER3 DNA MER1_type 19 47 -162 297 211 0 0 chr17 30138680 30138732 -59365821 - MER3 DNA MER1_type 0 209 158 396 209 0 0 chr17 30138735 30138802 -59365751 + AluJ/FLAM SINE Alu 1 67 -235 1025 122 117 46 chr17 30139100 30139297 -59365256 + AluJo SINE Alu 80 290 -22 1684 176 24 0 chr17 30140780 30141070 -59363483 - AluJo SINE Alu -15 297 1 1037 183 4 74 chr17 30141099 30141171 -59363382 - MIR SINE MIR -38 224 149 1721 146 9 72 chr17 30141171 30141492 -59363061 - AluJb SINE Alu -5 307 7 1037 183 4 74 chr17 30141492 30141648 -59362905 - MIR SINE MIR -113 149 12 261 139 0 0 chr17 30142157 30142200 -59362353 + (TG)n Simple_repeat Simple_repeat 1 43 0 259 314 126 35 chr17 30144713 30144968 -59359585 - L2 LINE L2 -84 3188 2911 222 321 25 0 chr17 30145307 30145388 -59359165 - L3b LINE CR1 -224 1359 1277 640 252 48 29 chr17 30145566 30145772 -59358781 + MIR SINE MIR 32 241 -21 1823 154 0 39 chr17 30145838 30146149 -59358404 - AluJb SINE Alu -13 299 1 319 55 41 27 chr17 30147515 30147588 -59356965 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 233 328 119 51 chr17 30148410 30148645 -59355908 + L2 LINE L2 3017 3267 -5 205 216 352 11 chr17 30148649 30148737 -59355816 - MIR SINE MIR -134 128 11 1707 121 69 17 chr17 30148991 30149128 -59355425 + AluJb SINE Alu 1 129 -183 2372 88 0 0 chr17 30149128 30149434 -59355119 + AluSq SINE Alu 1 306 -7 1707 121 69 17 chr17 30149434 30149585 -59354968 + AluJb SINE Alu 129 304 -8 379 334 128 14 chr17 30150157 30150510 -59354043 + L2 LINE L2 2556 2948 -366 243 309 173 0 chr17 30150688 30150798 -59353755 + L2 LINE L2 3182 3310 -3 2261 101 0 3 chr17 30151939 30152246 -59352307 - AluSp SINE Alu -7 306 1 214 321 0 0 chr17 30152314 30152370 -59352183 + L2 LINE L2 3212 3267 -5 481 258 120 0 chr17 30153030 30153197 -59351356 + L2 LINE L2 2684 2870 -444 180 176 0 0 chr17 30154918 30154952 -59349601 + CT-rich Low_complexity Low_complexity 1 34 0 495 246 22 7 chr17 30155167 30155305 -59349248 - MIR SINE MIR -15 247 108 1667 160 42 3 chr17 30155485 30155772 -59348781 + AluJo SINE Alu 1 298 -14 657 311 25 0 chr17 30155931 30156127 -59348426 - MIR SINE MIR -6 256 56 585 161 0 11 chr17 30156871 30156958 -59347595 + AluS SINE Alu 2 87 -225 1522 103 0 0 chr17 30156958 30157161 -59347392 + AluSx SINE Alu 16 218 -94 1942 62 0 4 chr17 30157161 30157405 -59347148 - AluY SINE Alu -68 243 1 336 248 262 14 chr17 30158053 30158194 -59346359 + MIR3 SINE MIR 19 194 -14 1048 186 148 57 chr17 30158882 30159223 -59345330 + L1ME2 LINE L1 5746 6124 -40 1904 88 42 18 chr17 30159223 30159508 -59345045 + AluSc SINE Alu 1 292 -17 1048 186 148 57 chr17 30159508 30159532 -59345021 + L1ME2 LINE L1 6124 6144 -20 1788 179 10 3 chr17 30159668 30159975 -59344578 + AluJb SINE Alu 1 309 -3 303 260 106 10 chr17 30160014 30160118 -59344435 + L1MC4 LINE L1 7928 8041 -1 2137 102 30 7 chr17 30160247 30160552 -59344001 + AluSx SINE Alu 1 312 0 526 242 74 13 chr17 30160563 30160712 -59343841 + MIR SINE MIR 78 235 -27 388 270 135 56 chr17 30160897 30161116 -59343437 + L1MC4a LINE L1 5326 5526 -969 510 45 0 148 chr17 30161116 30161154 -59343399 + MADE1 DNA Mariner 2 44 -36 2332 61 10 0 chr17 30161154 30161447 -59343106 - AluSp SINE Alu -17 296 1 2464 48 7 0 chr17 30161448 30161741 -59342812 - AluY SINE Alu -16 295 1 510 45 0 148 chr17 30161741 30161788 -59342765 + MADE1 DNA Mariner 43 76 -4 388 270 135 56 chr17 30161788 30161836 -59342717 + L1MC4a LINE L1 5526 5569 -926 1638 186 7 10 chr17 30161836 30162127 -59342426 - AluJo SINE Alu -21 291 2 388 270 135 56 chr17 30162127 30162279 -59342274 + L1MC4a LINE L1 5569 5708 -787 826 152 0 0 chr17 30162279 30162589 -59341964 + AluJo SINE Alu 1 310 0 2182 100 10 10 chr17 30162589 30162880 -59341673 + AluSx SINE Alu 2 292 -20 388 270 135 56 chr17 30162880 30163017 -59341536 + L1MC4a LINE L1 5707 5769 -726 23 33 0 0 chr17 30163160 30163190 -59341363 + AT_rich Low_complexity Low_complexity 1 30 0 760 171 17 0 chr17 30163190 30163307 -59341246 - AluSq/x SINE Alu -191 121 3 2032 145 10 6 chr17 30163408 30163719 -59340834 - AluJb SINE Alu 0 312 1 31 76 0 0 chr17 30163727 30163793 -59340760 + AT_rich Low_complexity Low_complexity 1 66 0 2388 62 0 3 chr17 30163833 30164121 -59340432 + AluSg1 SINE Alu 1 287 -22 21 36 0 0 chr17 30164891 30164919 -59339634 + GC_rich Low_complexity Low_complexity 1 28 0 218 325 0 25 chr17 30165091 30165171 -59339382 + MIR SINE MIR 61 138 -70 294 224 38 0 chr17 30165241 30165322 -59339231 + MIR SINE MIR 40 124 -84 202 137 0 59 chr17 30168266 30168317 -59336236 + (CCCG)n Simple_repeat Simple_repeat 2 49 0 207 288 87 135 chr17 30169586 30169827 -59334726 - L2 LINE L2 -4 3268 3042 2172 133 3 3 chr17 30169827 30170129 -59334424 + AluSx SINE Alu 1 302 -10 207 288 87 135 chr17 30170129 30170175 -59334378 - L2 LINE L2 -230 3042 2995 216 280 0 53 chr17 30170195 30170270 -59334283 - MIR SINE MIR -46 216 146 * 779 212 15 56 chr17 30170267 30170465 -59334088 + MIR SINE MIR 5 194 -68 1841 192 22 23 chr17 30170465 30171004 -59333549 + L1M4 LINE L1 4896 5429 -746 1055 68 0 15 chr17 30171004 30171136 -59333417 + AluYb8 SINE Alu 1 130 -188 6188 132 13 26 chr17 30171152 30171323 -59333230 + L1MC1 LINE L1 5254 5426 -907 2327 101 0 3 chr17 30171323 30171631 -59332922 + AluSc SINE Alu 1 307 -2 6188 132 13 26 chr17 30171631 30172539 -59332014 + L1MC1 LINE L1 5426 6319 -14 2184 134 0 0 chr17 30172541 30172840 -59331713 - AluSx SINE Alu -13 299 1 250 267 93 0 chr17 30172854 30172929 -59331624 + MIR SINE MIR 175 256 -6 343 308 77 8 chr17 30172932 30173062 -59331491 - MIR SINE MIR -110 152 14 2425 78 3 3 chr17 30173099 30173392 -59331161 - AluSq SINE Alu -12 301 9 651 262 30 20 chr17 30173798 30174000 -59330553 - MIR SINE MIR 0 262 59 639 271 6 18 chr17 30174098 30174159 -59330394 + MIR SINE MIR 95 155 -107 2270 57 3 44 chr17 30174159 30174480 -59330073 + AluY SINE Alu 1 309 0 639 271 6 18 chr17 30174480 30174587 -59329966 + MIR SINE MIR 155 262 0 435 276 55 16 chr17 30174587 30174714 -59329839 + MIR SINE MIR 106 237 -25 1358 166 57 166 chr17 30175039 30175226 -59329327 - L1MC5 LINE L1 -57 7904 7698 2343 93 20 0 chr17 30175226 30175527 -59329026 + AluY SINE Alu 1 307 -4 1358 166 57 166 chr17 30175527 30175548 -59329005 - L1MC5 LINE L1 -263 7698 7676 1855 139 13 58 chr17 30175548 30175858 -59328695 + AluSx SINE Alu 1 296 -16 1920 146 16 25 chr17 30175858 30176173 -59328380 + AluSx SINE Alu 1 312 0 1358 166 57 166 chr17 30176173 30176229 -59328324 - L1MC5 LINE L1 -284 7677 7616 1764 154 0 18 chr17 30176229 30176509 -59328044 - AluJb SINE Alu -32 280 6 1358 166 57 166 chr17 30176509 30176571 -59327982 - L1MC5 LINE L1 -345 7616 7549 2572 61 3 0 chr17 30176571 30176866 -59327687 - AluSp SINE Alu -17 296 1 1358 166 57 166 chr17 30176866 30177238 -59327315 - L1MC5 LINE L1 -412 7549 7279 2058 153 22 18 chr17 30177316 30177735 -59326818 + L1MB4 LINE L1 5718 6141 -39 672 120 0 0 chr17 30177791 30177891 -59326662 + FRAM SINE Alu 67 166 -10 234 105 0 0 chr17 30177891 30177929 -59326624 + L1MB4 LINE L1 6141 6178 -2 357 314 77 12 chr17 30178196 30178365 -59326188 + MIR SINE MIR 32 211 -51 1477 135 54 0 chr17 30178422 30178644 -59325909 + AluJb SINE Alu 61 294 -18 573 175 87 0 chr17 30178753 30178856 -59325697 + MER81 DNA DNA 1 112 -2 737 339 119 24 chr17 30178959 30179372 -59325181 + L2 LINE L2 2069 2564 -750 2063 137 27 0 chr17 30179372 30179664 -59324889 + AluSx SINE Alu 1 300 -12 737 339 119 24 chr17 30179664 30179879 -59324674 + L2 LINE L2 2564 2757 -557 811 160 90 0 chr17 30179890 30180046 -59324507 - MER58B DNA MER1_type 0 341 172 1056 188 0 0 chr17 30180048 30180224 -59324329 + AluSg/x SINE Alu 136 311 -1 2121 146 0 0 chr17 30180322 30180624 -59323929 - AluJb SINE Alu -9 303 2 318 349 20 27 chr17 30180713 30180862 -59323691 + L2 LINE L2 2932 3079 -193 777 244 56 9 chr17 30181033 30181246 -59323307 - MIR SINE MIR -38 224 2 442 264 63 57 chr17 30181516 30181675 -59322878 - MIR SINE MIR -74 188 29 948 133 7 0 chr17 30181899 30182034 -59322519 + AluJb SINE Alu 1 136 -176 2298 114 7 0 chr17 30182040 30182348 -59322205 + AluSp SINE Alu 1 310 -3 257 180 0 16 chr17 30182348 30182409 -59322144 + GA-rich Low_complexity Low_complexity 1 60 0 633 235 53 30 chr17 30182685 30182951 -59321602 - L1ME3 LINE L1 -318 5852 5582 2215 116 3 0 chr17 30182959 30183253 -59321300 - AluSx SINE Alu -14 298 4 204 368 16 40 chr17 30183305 30183430 -59321123 + L3b LINE CR1 1326 1447 -136 571 276 40 17 chr17 30183882 30184055 -59320498 - MIR SINE MIR -52 210 34 1027 228 51 34 chr17 30184566 30184803 -59319750 - MIR SINE MIR -21 241 1 1102 171 6 0 chr17 30186541 30186716 -59317837 - AluJo SINE Alu -5 307 132 1934 121 3 37 chr17 30186729 30187026 -59317527 + AluSx SINE Alu 2 288 -24 261 0 0 0 chr17 30187028 30187057 -59317496 + (TG)n Simple_repeat Simple_repeat 2 30 0 527 31 119 0 chr17 30187059 30187219 -59317334 + (TA)n Simple_repeat Simple_repeat 1 179 0 835 134 0 37 chr17 30187235 30187369 -59317184 - AluJo SINE Alu -183 129 1 255 311 113 26 chr17 30187505 30187656 -59316897 + L2 LINE L2 1990 2153 -1161 2225 121 0 7 chr17 30187728 30188033 -59316520 + AluSx SINE Alu 1 303 -9 913 252 19 0 chr17 30188061 30188271 -59316282 + MIR SINE MIR 49 262 0 408 356 90 3 chr17 30188271 30188560 -59315993 + L2 LINE L2 2364 2677 -637 1264 105 6 0 chr17 30188579 30188741 -59315812 - AluSg/x SINE Alu -16 294 132 1940 154 3 0 chr17 30188805 30189129 -59315424 + AluJb SINE Alu 1 325 0 222 341 114 19 chr17 30189132 30189432 -59315121 + L2 LINE L2 2739 3061 -211 190 339 16 0 chr17 30189538 30189600 -59314953 + L2 LINE L2 3139 3201 -71 1851 148 10 43 chr17 30192614 30192918 -59311635 - AluJb SINE Alu -18 294 1 202 219 0 0 chr17 30192961 30193002 -59311551 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 607 200 17 17 chr17 30193693 30193813 -59310740 + MIR SINE MIR 28 147 -115 1066 157 47 51 chr17 30193879 30194074 -59310479 + L1MB4 LINE L1 5944 6139 -41 2331 103 0 0 chr17 30194074 30194385 -59310168 - AluSx SINE Alu 0 312 1 1066 157 47 51 chr17 30194385 30194424 -59310129 + L1MB4 LINE L1 6139 6177 -3 2170 125 7 0 chr17 30194434 30194729 -59309824 + AluSx SINE Alu 1 297 -15 2475 97 0 0 chr17 30194730 30195038 -59309515 + AluSx SINE Alu 1 308 -4 186 196 0 98 chr17 30195087 30195138 -59309415 + MIR SINE MIR 217 262 0 1962 135 46 16 chr17 30195356 30195659 -59308894 - AluJb SINE Alu 0 312 1 831 223 28 51 chr17 30196155 30196370 -59308183 - MER20 DNA MER1_type -9 210 1 2320 105 0 0 chr17 30196457 30196753 -59307800 + AluSx SINE Alu 1 296 -16 2915 48 0 0 chr17 30196754 30197107 -59307446 + L1PA8 LINE L1 5820 6172 0 1086 134 27 103 chr17 30197594 30197738 -59306815 + MER96B DNA MER1_type? 177 294 -123 773 190 0 0 chr17 30197738 30197859 -59306694 + FLAM_A SINE Alu 1 121 -12 1086 134 27 103 chr17 30197859 30197975 -59306578 + MER96B DNA MER1_type? 294 417 0 553 298 78 16 chr17 30198028 30198273 -59306280 + Charlie8 DNA MER1_type 19 278 -2139 3459 186 65 17 chr17 30198313 30198702 -59305851 - MER63C DNA MER1_type -130 930 561 2357 99 3 0 chr17 30198702 30199004 -59305549 + AluSp SINE Alu 1 303 -10 3459 186 65 17 chr17 30199004 30199394 -59305159 - MER63C DNA MER1_type -499 561 113 241 260 0 14 chr17 30199398 30199492 -59305061 - MIR3 SINE MIR -113 149 12 278 240 107 0 chr17 30200299 30200374 -59304179 + MIR SINE MIR 44 126 -82 657 264 111 21 chr17 30200383 30200618 -59303935 - MIR SINE MIR -6 256 1 1027 181 0 0 chr17 30200860 30201026 -59303527 - FRAM SINE Alu -11 165 1 1519 208 35 0 chr17 30201530 30201814 -59302739 + AluJb SINE Alu 4 297 -15 536 241 63 68 chr17 30201915 30201987 -59302566 - MIR SINE MIR 0 262 191 2302 91 13 10 chr17 30201987 30202296 -59302257 - AluSx SINE Alu -2 310 1 536 241 63 68 chr17 30202296 30202414 -59302139 - MIR SINE MIR -71 191 73 259 175 0 35 chr17 30202973 30203030 -59301523 + MIR SINE MIR 72 126 -82 550 277 36 15 chr17 30203109 30203304 -59301249 + MLT1J LTR MaLR 1 199 -312 * 1390 246 46 35 chr17 30203298 30203692 -59300861 - MLT1H1 LTR MaLR -99 456 59 396 0 0 0 chr17 30203707 30203751 -59300802 + (CA)n Simple_repeat Simple_repeat 2 45 0 255 150 0 0 chr17 30203854 30203894 -59300659 - MLT1H1 LTR MaLR -530 60 21 1752 171 3 7 chr17 30203895 30204188 -59300365 + AluJo SINE Alu 2 293 -19 419 286 16 0 chr17 30204205 30204331 -59300222 + MLT1J LTR MaLR 384 511 0 184 359 0 0 chr17 30204602 30204655 -59299898 + L2 LINE L2 3176 3228 -44 312 349 50 25 chr17 30204825 30205063 -59299490 - L2 LINE L2 -785 2529 2286 290 302 67 62 chr17 30205166 30205345 -59299208 + MIR3 SINE MIR 17 196 -12 303 28 0 0 chr17 30205424 30205460 -59299093 + (CAA)n Simple_repeat Simple_repeat 2 37 0 221 253 173 0 chr17 30205724 30205799 -59298754 - L2 LINE L2 -17 3255 3168 255 31 0 0 chr17 30205883 30205915 -59298638 + (TG)n Simple_repeat Simple_repeat 2 33 0 2086 136 0 16 chr17 30205949 30206258 -59298295 - AluSx SINE Alu -8 304 1 1832 171 0 10 chr17 30206259 30206558 -59297995 - AluJo SINE Alu -16 296 1 456 226 0 0 chr17 30206570 30206654 -59297899 - MIR3 SINE MIR -11 197 114 878 151 0 22 chr17 30206657 30206796 -59297757 + AluJo SINE Alu 1 136 -176 2467 57 0 0 chr17 30206796 30207121 -59297432 + AluY SINE Alu 1 325 0 442 262 78 0 chr17 30207154 30207295 -59297258 - MIR SINE MIR -36 226 75 396 311 43 24 chr17 30207330 30207494 -59297059 - MER5A DNA MER1_type -16 173 7 491 267 203 0 chr17 30208033 30208220 -59296333 + MIR SINE MIR 29 253 -9 2547 60 0 0 chr17 30208332 30208631 -59295922 + AluSp SINE Alu 1 299 -14 1547 178 57 4 chr17 30208651 30208932 -59295621 + AluJo SINE Alu 1 296 -6 1829 238 86 51 chr17 30209007 30209244 -59295309 + L1ME3A LINE L1 5522 5749 -421 2264 119 3 0 chr17 30209244 30209556 -59294997 - AluSq SINE Alu 0 313 1 2027 129 11 0 chr17 30209562 30209907 -59294646 - AluSq SINE Alu 0 313 1 1829 238 86 51 chr17 30209907 30210287 -59294266 + L1ME3A LINE L1 5753 6168 -2 748 190 0 29 chr17 30210929 30211066 -59293487 + AluJo/FLAM SINE Alu 1 133 -169 2312 113 0 0 chr17 30211068 30211360 -59293193 - AluSc SINE Alu -17 292 1 2075 123 10 10 chr17 30211361 30211662 -59292891 - AluSx SINE Alu -11 301 1 2005 114 114 0 chr17 30211721 30212001 -59292552 + AluSx SINE Alu 1 312 0 2533 74 0 0 chr17 30212091 30212402 -59292151 - AluY SINE Alu 0 311 1 26 74 0 0 chr17 30212474 30212528 -59292025 + AT_rich Low_complexity Low_complexity 1 54 0 * 830 204 6 44 chr17 30212501 30212539 -59292014 - AluJb SINE Alu -5 307 269 1873 146 6 44 chr17 30212539 30212674 -59291879 + AluJb SINE Alu 2 141 -171 2793 23 0 0 chr17 30212674 30212977 -59291576 + AluY SINE Alu 1 303 -8 1873 146 6 44 chr17 30212977 30213157 -59291396 + AluJb SINE Alu 141 305 -7 830 204 6 44 chr17 30213157 30213299 -59291254 - AluJb SINE Alu -43 269 134 723 291 94 26 chr17 30213311 30213907 -59290646 + L1MEd LINE L1 967 1688 -802 775 183 8 0 chr17 30214260 30214391 -59290162 + AluJo/FLAM SINE Alu 1 132 -170 2236 112 0 10 chr17 30214392 30214704 -59289849 + AluSx SINE Alu 4 312 0 263 243 81 54 chr17 30214795 30214906 -59289647 + L1ME LINE L1 5772 5885 -285 2350 92 0 7 chr17 30214917 30215211 -59289342 - AluY SINE Alu -19 292 1 2284 102 3 3 chr17 30215261 30215556 -59288997 - AluSx SINE Alu -17 295 1 269 26 26 0 chr17 30215565 30215603 -59288950 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2276 92 3 0 chr17 30215605 30215888 -59288665 - AluSx SINE Alu -24 288 5 1762 141 6 73 chr17 30215919 30216246 -59288307 + AluJb SINE Alu 1 305 -7 447 259 73 60 chr17 30216330 30216478 -59288075 + MLT1L LTR MaLR 381 535 -80 2435 54 3 17 chr17 30216478 30216776 -59287777 - AluY SINE Alu -16 295 2 447 259 73 60 chr17 30216776 30216859 -59287694 + MLT1L LTR MaLR 535 615 0 325 290 81 64 chr17 30216860 30217143 -59287410 - L2 LINE L2 -746 2568 2281 1644 196 75 55 chr17 30217143 30217326 -59287227 + MLT1C LTR MaLR 6 184 -283 2287 116 0 7 chr17 30217326 30217636 -59286917 + AluSx SINE Alu 1 308 -4 1644 196 75 55 chr17 30217636 30217905 -59286648 + MLT1C LTR MaLR 184 467 0 531 314 80 59 chr17 30217905 30218552 -59286001 - L2 LINE L2 -1047 2267 1607 1373 167 129 20 chr17 30218619 30218913 -59285640 + L1MC3 LINE L1 7106 7431 -354 1661 158 38 24 chr17 30218913 30219033 -59285520 + AluJb SINE Alu 1 118 -194 2167 129 3 0 chr17 30219033 30219344 -59285209 + AluSx SINE Alu 1 312 0 1661 158 38 24 chr17 30219344 30219514 -59285039 + AluJb SINE Alu 118 295 -17 2395 60 0 0 chr17 30219516 30219838 -59284715 + AluY SINE Alu 1 322 0 1738 153 197 60 chr17 30219860 30220240 -59284313 + MLT1D LTR MaLR 1 444 -61 2171 114 0 3 chr17 30220240 30220554 -59283999 - AluSx SINE Alu 0 312 1 1738 153 197 60 chr17 30220554 30220590 -59283963 + MLT1D LTR MaLR 444 474 -31 1153 129 0 28 chr17 30220590 30220761 -59283792 - AluJb SINE Alu -11 301 134 1578 191 3 46 chr17 30220761 30220854 -59283699 - AluJo SINE Alu -2 310 215 2475 83 0 0 chr17 30220854 30221154 -59283399 - AluSg SINE Alu -10 300 1 1578 191 3 46 chr17 30221154 30221384 -59283169 - AluJo SINE Alu -97 215 1 2409 118 8 0 chr17 30221405 30221762 -59282791 - L1PB3 LINE L1 -1 6153 5794 2289 112 0 10 chr17 30221762 30222076 -59282477 + AluSx SINE Alu 1 311 -1 638 52 0 0 chr17 30222076 30222153 -59282400 - L1P5 LINE L1 -564 5590 5514 230 135 0 0 chr17 30222153 30222190 -59282363 + MLT1D LTR MaLR 467 503 -2 1802 263 83 24 chr17 30222191 30222237 -59282316 + HAL1 LINE L1 1109 1151 -1356 2144 114 6 19 chr17 30222237 30222552 -59282001 + AluJb SINE Alu 1 311 -1 1802 263 83 24 chr17 30222552 30222885 -59281668 + HAL1 LINE L1 1151 1463 -1044 2435 71 10 0 chr17 30222885 30223180 -59281373 + AluSp SINE Alu 1 298 -15 1802 263 83 24 chr17 30223180 30223543 -59281010 + HAL1 LINE L1 1463 1896 -611 1312 165 0 0 chr17 30223543 30223737 -59280816 + AluJb SINE Alu 1 194 -118 1534 65 0 15 chr17 30223834 30224033 -59280520 - L1PA5 LINE L1 -3 6151 5956 502 227 77 49 chr17 30224056 30224276 -59280277 + HAL1 LINE L1 2011 2223 -284 2472 81 0 10 chr17 30224276 30224586 -59279967 - AluSp SINE Alu -6 307 1 2069 137 3 10 chr17 30224587 30224893 -59279660 - AluJb SINE Alu -8 304 1 502 227 77 49 chr17 30224893 30225001 -59279552 + HAL1 LINE L1 2222 2400 -107 2381 102 0 10 chr17 30225029 30225342 -59279211 + AluSq SINE Alu 1 310 -3 1912 171 3 3 chr17 30225758 30226062 -59278491 + AluJo SINE Alu 1 304 -8 2153 123 7 3 chr17 30226135 30226443 -59278110 - AluSx SINE Alu -3 309 1 2379 61 44 3 chr17 30227138 30227435 -59277118 + AluY SINE Alu 2 310 -1 2007 138 0 3 chr17 30227641 30227931 -59276622 + AluSx SINE Alu 11 299 -13 2407 97 7 0 chr17 30227933 30228243 -59276310 + AluSx SINE Alu 1 312 0 364 316 39 24 chr17 30228445 30228651 -59275902 + MIR SINE MIR 8 216 -46 205 280 40 64 chr17 30228706 30228831 -59275722 - L2 LINE L2 -206 3066 2945 707 212 54 27 chr17 30228838 30229022 -59275531 - MER53 DNA DNA 0 189 1 318 235 59 0 chr17 30230302 30230387 -59274166 + MIR SINE MIR 97 186 -76 270 0 0 0 chr17 30231067 30231097 -59273456 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 2012 162 0 3 chr17 30231155 30231463 -59273090 + AluJb SINE Alu 1 307 -5 250 284 0 14 chr17 30231485 30231559 -59272994 - L2 LINE L2 -73 3240 3168 1448 118 45 5 chr17 30232098 30232319 -59272234 - MER30 DNA MER1_type 0 230 1 2646 51 0 10 chr17 30232487 30232799 -59271754 - AluY SINE Alu -1 310 2 221 288 100 12 chr17 30232884 30232964 -59271589 - MIR SINE MIR -85 123 37 2335 93 3 7 chr17 30233199 30233499 -59271054 + AluSq SINE Alu 1 299 -14 387 265 27 117 chr17 30234047 30234270 -59270283 + MIR SINE MIR 48 250 -12 241 211 70 0 chr17 30235345 30235416 -59269137 + CT-rich Low_complexity Low_complexity 3 78 0 656 188 8 8 chr17 30235443 30235576 -59268977 + MIR SINE MIR 101 233 -29 2549 65 3 0 chr17 30235890 30236196 -59268357 + AluSp SINE Alu 1 307 -6 2608 69 0 0 chr17 30236415 30236720 -59267833 - AluSx SINE Alu -7 305 1 208 241 80 80 chr17 30236758 30236783 -59267770 - MIR SINE MIR -123 139 115 1625 143 4 8 chr17 30236783 30237027 -59267526 + AluSx SINE Alu 44 286 -26 208 241 80 80 chr17 30237027 30237113 -59267440 - MIR SINE MIR -146 116 28 1265 115 111 5 chr17 30239282 30239490 -59265063 + MER30 DNA MER1_type 1 230 0 1645 160 53 3 chr17 30239552 30239834 -59264719 - AluJb SINE Alu -16 296 1 232 271 57 57 chr17 30240759 30240899 -59263654 + L3 LINE CR1 1435 1574 -3 702 181 142 10 chr17 30241043 30241248 -59263305 - L1ME3 LINE L1 -9 6153 5922 2256 79 20 0 chr17 30242608 30242900 -59261653 - AluSp SINE Alu -15 298 1 1905 132 21 3 chr17 30242912 30243200 -59261353 - AluJo SINE Alu -16 296 4 21 0 0 0 chr17 30243685 30243706 -59260847 + AT_rich Low_complexity Low_complexity 1 21 0 2213 94 21 0 chr17 30247355 30247642 -59256911 + AluSx SINE Alu 1 293 -19 288 111 0 0 chr17 30249444 30249489 -59255064 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 53 0 0 chr17 30250426 30250464 -59254089 + AT_rich Low_complexity Low_complexity 1 38 0 182 37 37 0 chr17 30250785 30250812 -59253741 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 30251409 30251439 -59253114 + AT_rich Low_complexity Low_complexity 1 30 0 276 77 0 0 chr17 30252431 30252470 -59252083 + (TA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr17 30252656 30252678 -59251875 + AT_rich Low_complexity Low_complexity 1 22 0 2855 16 0 0 chr17 30253346 30253657 -59250896 - AluY SINE Alu 0 311 1 194 81 27 0 chr17 30253670 30253707 -59250846 + (TTATA)n Simple_repeat Simple_repeat 5 42 0 2066 114 20 7 chr17 30254025 30254322 -59250231 - AluSq SINE Alu -12 301 1 237 252 266 14 chr17 30254391 30254534 -59250019 + MIR3 SINE MIR 19 197 -11 2409 85 0 0 chr17 30254966 30255259 -59249294 - AluSq SINE Alu -20 293 1 842 105 0 77 chr17 30255265 30255408 -59249145 - FLAM_C SINE Alu 0 133 2 650 161 148 27 chr17 30255790 30255939 -59248614 - AluJo SINE Alu -84 228 62 2339 76 3 0 chr17 30255960 30256249 -59248304 - AluSq SINE Alu -18 295 6 2111 106 0 52 chr17 30256554 30256884 -59247669 - AluSp SINE Alu 0 313 1 1267 135 156 30 chr17 30257560 30257797 -59246756 - AluJo SINE Alu -15 297 31 2247 65 0 0 chr17 30257812 30258075 -59246478 - AluY SINE Alu -48 263 1 655 143 95 40 chr17 30258753 30258879 -59245674 + FLAM_C SINE Alu 1 133 0 2236 110 0 7 chr17 30259312 30259622 -59244931 + AluSg SINE Alu 3 310 0 2062 112 0 7 chr17 30259844 30260121 -59244432 + AluSx SINE Alu 1 275 -37 303 93 0 0 chr17 30260131 30260174 -59244379 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2438 76 0 3 chr17 30260293 30260595 -59243958 - AluY SINE Alu -10 301 1 653 141 339 11 chr17 30260706 30260883 -59243670 - MER46A DNA MER2_type 0 236 2 1551 105 23 146 chr17 30260907 30261115 -59243438 - AluY SINE Alu 0 301 150 2171 90 11 4 chr17 30261115 30261393 -59243160 - AluSg SINE Alu -30 280 1 1551 105 23 146 chr17 30261393 30261527 -59243026 - AluY SINE Alu -151 150 1 300 27 0 0 chr17 30261553 30261590 -59242963 + (CA)n Simple_repeat Simple_repeat 2 38 0 556 197 13 118 chr17 30262225 30262259 -59242294 + MER58A DNA MER1_type 40 76 -2344 1506 176 48 28 chr17 30262259 30262548 -59242005 + AluJo SINE Alu 5 299 -13 556 197 13 118 chr17 30262548 30262665 -59241888 + MER58A DNA MER1_type 76 175 -49 2002 120 20 17 chr17 30263079 30263379 -59241174 - AluSq SINE Alu -12 301 1 294 319 35 40 chr17 30263639 30263801 -59240752 + L2 LINE L2 2554 2715 -599 2408 74 0 0 chr17 30263801 30264085 -59240468 + AluSx SINE Alu 1 284 -28 180 0 0 0 chr17 30264085 30264105 -59240448 + (TA)n Simple_repeat Simple_repeat 2 21 0 294 319 35 40 chr17 30264105 30264167 -59240386 + L2 LINE L2 2713 2778 -536 1858 97 0 20 chr17 30264445 30264693 -59239860 - AluSx SINE Alu -69 243 1 311 250 0 0 chr17 30264881 30264957 -59239596 + MER116 DNA Mariner 1 76 -4 1930 130 18 0 chr17 30265090 30265374 -59239179 - AluSx SINE Alu -20 292 4 2100 115 13 13 chr17 30265786 30266098 -59238455 + AluSq SINE Alu 1 312 -1 2508 48 0 3 chr17 30266311 30266602 -59237951 - AluY SINE Alu -21 290 1 25 0 0 0 chr17 30267394 30267419 -59237134 + AT_rich Low_complexity Low_complexity 1 25 0 1172 208 95 15 chr17 30267602 30267866 -59236687 - AluJo SINE Alu -15 287 3 1921 147 13 13 chr17 30267870 30268170 -59236383 - AluSx SINE Alu -12 300 1 589 206 0 0 chr17 30268500 30268602 -59235951 + AluJ/FLAM SINE Alu 1 102 -210 660 178 0 0 chr17 30268602 30268709 -59235844 + AluJo/FRAM SINE Alu 144 250 -62 1154 172 5 36 chr17 30268709 30268759 -59235794 + AluJo SINE Alu 85 135 -177 2157 121 10 7 chr17 30268759 30269064 -59235489 + AluSx SINE Alu 1 306 -6 1734 130 0 82 chr17 30269068 30269398 -59235155 + AluSx SINE Alu 1 303 -9 1154 172 5 36 chr17 30269398 30269563 -59234990 + AluJo SINE Alu 138 298 -14 991 134 30 18 chr17 30269601 30269765 -59234788 + FRAM SINE Alu 1 166 -10 2370 73 7 0 chr17 30269828 30270116 -59234437 - AluY SINE Alu -20 291 2 401 224 12 0 chr17 30270248 30270333 -59234220 + MSTD LTR MaLR 258 343 -53 2152 102 23 16 chr17 30270334 30270638 -59233915 + AluSg SINE Alu 5 310 0 836 155 0 7 chr17 30271394 30271536 -59233017 - AluJo/FRAM SINE Alu -13 299 159 698 122 0 0 chr17 30271539 30271637 -59232916 - AluJ/FLAM SINE Alu -213 99 2 2536 89 0 0 chr17 30272479 30272792 -59231761 + AluSq SINE Alu 1 313 0 2195 101 3 0 chr17 30273076 30273364 -59231189 + AluSg SINE Alu 1 289 -21 2335 99 10 0 chr17 30273373 30273675 -59230878 + AluSc SINE Alu 5 309 0 268 279 123 0 chr17 30275827 30275949 -59228604 - MIR SINE MIR -2 260 124 2382 68 3 7 chr17 30276105 30276399 -59228154 - AluY SINE Alu -18 293 1 293 228 147 44 chr17 30276687 30276823 -59227730 - MIR SINE MIR -111 151 2 1442 177 42 24 chr17 30276933 30277221 -59227332 + AluJb SINE Alu 10 302 -10 2217 119 3 0 chr17 30277366 30277668 -59226885 + AluSq SINE Alu 1 303 -10 1499 128 155 8 chr17 30277981 30278239 -59226314 - AluSg SINE Alu -14 296 1 1790 146 42 36 chr17 30278431 30278739 -59225814 + AluSx SINE Alu 3 312 0 210 71 0 0 chr17 30279091 30279119 -59225434 + (A)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr17 30280688 30280712 -59223841 + GC_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 30280886 30280909 -59223644 + GC_rich Low_complexity Low_complexity 1 23 0 44 35 0 0 chr17 30280923 30280981 -59223572 + GC_rich Low_complexity Low_complexity 1 58 0 202 284 30 0 chr17 30281768 30281835 -59222718 + C-rich Low_complexity Low_complexity 1 69 0 255 254 0 0 chr17 30281960 30282082 -59222471 + (TGG)n Simple_repeat Simple_repeat 1 122 0 180 97 0 0 chr17 30282567 30282598 -59221955 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 300 271 113 28 chr17 30283162 30283339 -59221214 + L1ME3A LINE L1 5959 6150 -20 2252 164 74 0 chr17 30283349 30283770 -59220783 - L1MB3 LINE L1 0 6183 5732 2086 112 22 0 chr17 30284010 30284307 -59220246 - AluSp SINE Alu 0 303 1 1687 168 50 3 chr17 30284454 30284752 -59219801 + AluJb SINE Alu 1 312 0 2260 77 0 11 chr17 30285247 30285533 -59219020 + AluSc SINE Alu 1 283 -26 1219 170 15 93 chr17 30285751 30285928 -59218625 - AluJb SINE Alu -11 301 159 276 91 0 0 chr17 30285928 30285972 -59218581 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1219 170 15 93 chr17 30285972 30286118 -59218435 - AluJb SINE Alu -153 159 3 2305 106 3 0 chr17 30286243 30286545 -59218008 - AluSc SINE Alu -6 303 1 22 43 0 21 chr17 30286746 30286764 -59217789 + AT_rich Low_complexity Low_complexity 1 18 -28 2051 115 7 0 chr17 30286764 30287042 -59217511 + AluSq SINE Alu 1 280 -33 22 43 0 21 chr17 30287042 30287070 -59217483 + AT_rich Low_complexity Low_complexity 18 46 0 1561 169 8 23 chr17 30287071 30287337 -59217216 + AluJb SINE Alu 1 262 -50 27 73 0 0 chr17 30287357 30287412 -59217141 + AT_rich Low_complexity Low_complexity 1 55 0 2036 101 7 42 chr17 30287444 30287752 -59216801 - AluSx SINE Alu -15 297 1 181 232 0 54 chr17 30287767 30287823 -59216730 - L2 LINE L2 0 3313 3261 21 36 0 0 chr17 30287823 30287851 -59216702 + AT_rich Low_complexity Low_complexity 1 28 0 367 276 10 0 chr17 30287969 30288067 -59216486 + MIR3 SINE MIR 105 203 -5 473 333 13 21 chr17 30288526 30288763 -59215790 + MIR SINE MIR 5 239 -23 2134 117 0 63 chr17 30288770 30288957 -59215596 - AluSx SINE Alu 0 312 154 2345 104 0 3 chr17 30288957 30289266 -59215287 - AluSg SINE Alu -2 308 1 2134 117 0 63 chr17 30289266 30289411 -59215142 - AluSx SINE Alu -158 154 1 289 133 0 55 chr17 30289411 30289476 -59215077 - AluJb SINE Alu -166 136 84 2169 114 7 3 chr17 30289655 30289952 -59214601 + AluSx SINE Alu 1 298 -14 2279 104 0 3 chr17 30290008 30290305 -59214248 + AluSq SINE Alu 1 296 -17 1561 167 3 82 chr17 30290463 30290596 -59213957 + AluJo SINE Alu 1 143 -169 2686 40 0 0 chr17 30290596 30290897 -59213656 - AluY SINE Alu -10 301 1 1561 167 3 82 chr17 30290897 30291092 -59213461 + AluJo SINE Alu 143 303 -9 1932 151 3 22 chr17 30291369 30291680 -59212873 + AluJb SINE Alu 1 305 -7 1282 204 164 76 chr17 30291765 30292183 -59212370 - MLT1F1 LTR MaLR -1 566 97 2089 108 31 0 chr17 30292183 30292469 -59212084 + AluSx SINE Alu 1 295 -17 1282 204 164 76 chr17 30292469 30292562 -59211991 - MLT1F1 LTR MaLR -470 97 14 22 35 0 0 chr17 30292718 30292747 -59211806 + AT_rich Low_complexity Low_complexity 1 29 0 667 275 17 47 chr17 30293137 30293262 -59211291 + L1MD2 LINE L1 6133 6260 -99 2124 111 7 26 chr17 30293262 30293569 -59210984 + AluSx SINE Alu 1 301 -11 667 275 17 47 chr17 30293569 30293651 -59210902 + L1MD2 LINE L1 6260 6335 -24 1673 137 107 0 chr17 30293651 30293914 -59210639 - AluSg SINE Alu -19 291 1 667 275 17 47 chr17 30293914 30293938 -59210615 + L1MD2 LINE L1 6335 6358 -1 21 57 0 0 chr17 30293979 30294014 -59210539 + AT_rich Low_complexity Low_complexity 1 35 0 2096 78 37 0 chr17 30294031 30294323 -59210230 + AluSg SINE Alu 2 303 0 2271 101 0 0 chr17 30294378 30294675 -59209878 + AluSc SINE Alu 1 297 -12 1666 146 3 74 chr17 30294680 30294989 -59209564 + AluJo SINE Alu 1 287 -25 31 0 0 0 chr17 30294989 30295020 -59209533 + AT_rich Low_complexity Low_complexity 1 31 0 2618 46 7 3 chr17 30295022 30295328 -59209225 + AluY SINE Alu 1 307 -4 1730 85 0 5 chr17 30295335 30295559 -59208994 + AluSc SINE Alu 72 294 -15 550 220 52 94 chr17 30295819 30296105 -59208448 - MLT1D LTR MaLR -231 274 1 539 163 0 0 chr17 30296105 30296191 -59208362 + MER97c DNA MER1_type? 61 146 -944 1557 108 132 16 chr17 30296191 30296476 -59208077 - AluSg1 SINE Alu 0 314 1 1661 166 6 38 chr17 30296478 30296797 -59207756 - AluJb SINE Alu -3 309 1 32 0 0 0 chr17 30296800 30296832 -59207721 + AT_rich Low_complexity Low_complexity 1 32 0 1939 135 0 21 chr17 30296845 30297134 -59207419 - AluSx SINE Alu -29 283 1 572 263 128 17 chr17 30297304 30297601 -59206952 + L2 LINE L2 2972 3301 -12 787 302 114 29 chr17 30298156 30298358 -59206195 + L2 LINE L2 2145 2328 -986 2192 128 0 0 chr17 30298358 30298655 -59205898 + AluSq SINE Alu 1 297 -16 183 42 0 0 chr17 30298658 30298682 -59205871 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 787 302 114 29 chr17 30298682 30298959 -59205594 + L2 LINE L2 2329 2669 -645 274 286 88 11 chr17 30299353 30299444 -59205109 + L2 LINE L2 3175 3272 0 1874 149 3 7 chr17 30299521 30299810 -59204743 - AluJb SINE Alu -24 288 1 2236 79 14 7 chr17 30300327 30300643 -59203910 - AluSx SINE Alu 0 318 1 2003 113 38 20 chr17 30301456 30301749 -59202804 - AluSx SINE Alu -14 298 1 1105 214 175 8 chr17 30301847 30302104 -59202449 + AluSg SINE Alu 1 300 0 1822 115 78 0 chr17 30302150 30302419 -59202134 + AluSx SINE Alu 1 290 -22 300 280 71 59 chr17 30302434 30302475 -59202078 + HAL1b LINE L1 393 432 -1965 2161 118 0 0 chr17 30302475 30302771 -59201782 - AluSx SINE Alu -6 306 11 300 280 71 59 chr17 30302771 30303012 -59201541 + HAL1b LINE L1 432 1710 -687 2535 71 0 0 chr17 30303020 30303328 -59201225 + AluY SINE Alu 1 308 -3 1974 95 80 0 chr17 30303720 30303994 -59200559 + AluY SINE Alu 1 296 -15 1934 136 0 48 chr17 30304162 30304346 -59200207 + AluJb SINE Alu 1 165 -147 2401 94 0 0 chr17 30304346 30304653 -59199900 - AluSx SINE Alu -5 307 1 1934 136 0 48 chr17 30304653 30304778 -59199775 + AluJb SINE Alu 165 295 -17 517 291 74 5 chr17 30304833 30305022 -59199531 + MIR SINE MIR 5 206 -56 1963 121 0 7 chr17 30305084 30305356 -59199197 - AluSx SINE Alu -23 289 20 1866 154 0 55 chr17 30305418 30305562 -59198991 + AluJb SINE Alu 1 151 -161 2260 118 3 0 chr17 30305562 30305868 -59198685 + AluSx SINE Alu 1 307 -5 1866 154 0 55 chr17 30305868 30306053 -59198500 + AluJb SINE Alu 151 312 0 490 207 12 95 chr17 30306053 30306222 -59198331 + L1ME4a LINE L1 5965 6119 -2 2317 119 0 0 chr17 30306285 30306595 -59197958 + AluSg SINE Alu 1 310 0 227 229 10 83 chr17 30307127 30307223 -59197330 - L2 LINE L2 0 3272 3184 1636 121 18 98 chr17 30307228 30307365 -59197188 + AluJb SINE Alu 1 147 -165 1939 151 16 3 chr17 30307365 30307670 -59196883 + AluSx SINE Alu 1 309 -3 1636 121 18 98 chr17 30307670 30307870 -59196683 + AluJb SINE Alu 147 311 -1 282 289 39 39 chr17 30307891 30308047 -59196506 - L2 LINE L2 -81 3232 3077 1845 87 0 0 chr17 30308107 30308337 -59196216 + AluSg1 SINE Alu 1 230 -79 2224 102 3 3 chr17 30309282 30309587 -59194966 - AluSx SINE Alu -7 305 1 2697 215 22 47 chr17 30309594 30309702 -59194851 + MER82 DNA MER2_type 22 131 -522 2446 70 0 10 chr17 30309702 30310004 -59194549 - AluY SINE Alu -12 299 1 2697 215 22 47 chr17 30310004 30310083 -59194470 + MER82 DNA MER2_type 131 210 -443 811 161 0 0 chr17 30310083 30310207 -59194346 + FLAM_C SINE Alu 1 124 -9 2697 215 22 47 chr17 30310207 30310660 -59193893 + MER82 DNA MER2_type 210 647 -6 374 289 0 23 chr17 30310688 30310816 -59193737 - MIR SINE MIR -127 135 11 261 297 0 0 chr17 30310994 30311068 -59193485 - MIR SINE MIR -75 187 114 1972 159 10 13 chr17 30311068 30311382 -59193171 + AluSq SINE Alu 1 313 0 487 223 166 106 chr17 30311384 30311636 -59192917 - MLT1L LTR MaLR -296 319 45 2192 119 0 0 chr17 30311636 30311938 -59192615 + AluY SINE Alu 1 302 -9 487 223 166 106 chr17 30311938 30311986 -59192567 - MLT1L LTR MaLR -570 45 1 2010 161 0 3 chr17 30311988 30312293 -59192260 + AluSx SINE Alu 2 305 -7 2907 188 104 17 chr17 30312408 30313061 -59191492 - L1MC4 LINE L1 -132 7910 7201 1994 136 3 3 chr17 30313073 30313369 -59191184 - AluSx SINE Alu -22 290 3 1064 217 90 67 chr17 30313369 30313619 -59190934 - L1MC4 LINE L1 -993 7049 6787 671 195 39 0 chr17 30313619 30313747 -59190806 + FLAM_C SINE Alu 1 133 0 1064 217 90 67 chr17 30313747 30313842 -59190711 - L1MC4 LINE L1 -1255 6787 6696 1240 223 71 29 chr17 30313843 30313894 -59190659 + MLT1A1 LTR MaLR 1 48 -317 2052 113 7 3 chr17 30313894 30314186 -59190367 + AluSx SINE Alu 7 299 -13 1240 223 71 29 chr17 30314186 30314232 -59190321 + MLT1A1 LTR MaLR 48 91 -274 1426 168 13 70 chr17 30314232 30314365 -59190188 + AluJo SINE Alu 1 140 -172 1508 214 0 4 chr17 30314365 30314645 -59189908 + AluJb SINE Alu 1 279 -33 324 0 0 0 chr17 30314649 30314685 -59189868 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1426 168 13 70 chr17 30314685 30314861 -59189692 + AluJo SINE Alu 143 297 -15 1240 223 71 29 chr17 30314861 30315112 -59189441 + MLT1A1 LTR MaLR 91 365 0 244 245 0 0 chr17 30315171 30315220 -59189333 + MER5A DNA MER1_type 21 69 -120 2144 105 7 0 chr17 30315221 30315517 -59189036 + AluSx SINE Alu 1 298 -14 401 127 0 14 chr17 30315517 30315588 -59188965 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 256 196 261 22 chr17 30315590 30315682 -59188871 + MER5A DNA MER1_type 70 183 -6 931 111 0 15 chr17 30315690 30315825 -59188728 + AluJ SINE Alu 1 133 -169 752 133 0 0 chr17 30315832 30315945 -59188608 + AluJ SINE Alu 200 312 0 2085 111 7 3 chr17 30316068 30316375 -59188178 + AluSx SINE Alu 1 308 -4 641 190 0 25 chr17 30316391 30316512 -59188041 + FLAM_A SINE Alu 8 125 -17 200 329 13 0 chr17 30316556 30316635 -59187918 + CT-rich Low_complexity Low_complexity 1 80 0 272 340 21 10 chr17 30316871 30316968 -59187585 + MIR SINE MIR 30 127 -135 324 322 74 70 chr17 30316983 30317116 -59187437 + MIR SINE MIR 19 150 -112 1785 162 3 10 chr17 30317116 30317425 -59187128 + AluJo SINE Alu 1 307 -5 1814 123 56 3 chr17 30317434 30317719 -59186834 + AluSx SINE Alu 1 300 -12 324 322 74 70 chr17 30317719 30317817 -59186736 + MIR SINE MIR 157 261 -1 * 339 248 114 13 chr17 30317802 30317951 -59186602 + MIR SINE MIR 98 261 -1 1948 122 7 13 chr17 30318072 30318239 -59186314 - AluSx SINE Alu -10 302 136 2303 80 0 3 chr17 30318239 30318538 -59186015 - AluSc SINE Alu -11 298 1 1948 122 7 13 chr17 30318538 30318674 -59185879 - AluSx SINE Alu -176 136 1 2296 74 13 0 chr17 30318722 30319021 -59185532 + AluSp SINE Alu 1 303 -10 388 283 47 121 chr17 30319849 30320213 -59184340 + L2 LINE L2 2862 3198 -74 452 266 35 0 chr17 30320269 30320382 -59184171 + L2 LINE L2 3197 3313 0 225 0 0 0 chr17 30320475 30320500 -59184053 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 2095 121 0 0 chr17 30320516 30320813 -59183740 - AluSx SINE Alu -15 297 1 2141 94 7 0 chr17 30320818 30321116 -59183437 - AluSp SINE Alu -13 300 1 1709 104 47 47 chr17 30321120 30321417 -59183136 - AluJb SINE Alu -15 297 1 416 107 0 0 chr17 30321462 30321518 -59183035 + AluJ/FLAM SINE Alu 2 57 -255 267 293 191 35 chr17 30321540 30321671 -59182882 - L2 LINE L2 -107 3206 3097 1009 191 13 65 chr17 30321671 30321901 -59182652 - MER20 DNA MER1_type -1 218 1 267 293 191 35 chr17 30321901 30322162 -59182391 - L2 LINE L2 -216 3097 2753 1911 137 0 22 chr17 30322180 30322493 -59182060 - AluSx SINE Alu -6 306 1 445 151 0 0 chr17 30322498 30322571 -59181982 - L1MB4 LINE L1 -295 5885 5813 306 260 0 62 chr17 30322648 30322744 -59181809 + L1MC4 LINE L1 6614 6703 -1339 * 319 280 0 32 chr17 30322661 30322754 -59181799 - L1MC4 LINE L1 -1339 6703 6614 297 160 0 69 chr17 30322762 30322893 -59181660 + (TA)n Simple_repeat Simple_repeat 1 122 0 355 175 0 114 chr17 30322899 30323067 -59181486 - L1MC4 LINE L1 -1339 6703 6614 303 265 0 92 chr17 30322995 30323093 -59181460 + L1MC4 LINE L1 6614 6702 -1340 * 210 217 0 22 chr17 30323100 30323146 -59181407 + (TA)n Simple_repeat Simple_repeat 1 45 0 338 204 0 82 chr17 30323146 30323244 -59181309 - L1MC4 LINE L1 -1339 6703 6614 * 375 204 0 92 chr17 30323161 30323259 -59181294 + L1MC4 LINE L1 6614 6702 -1340 337 237 0 72 chr17 30323267 30323364 -59181189 - L1MC4 LINE L1 -1339 6703 6614 * 365 234 0 53 chr17 30323296 30323390 -59181163 + L1MC4 LINE L1 6614 6702 -1340 388 188 13 56 chr17 30323422 30323547 -59181006 - L1MCa LINE L1 -1339 6983 1995 2079 169 38 13 chr17 30323552 30323922 -59180631 - L1M3 LINE L1 -390 5793 5287 1890 154 0 0 chr17 30323922 30324221 -59180332 - AluJb SINE Alu -7 305 7 2079 169 38 13 chr17 30324221 30324300 -59180253 - L1M3 LINE L1 -896 5287 5211 1858 125 10 14 chr17 30324446 30324581 -59179972 + AluSx SINE Alu 1 135 -177 2105 123 0 7 chr17 30324581 30324891 -59179662 + AluSx SINE Alu 1 308 -4 1858 125 10 14 chr17 30324891 30325052 -59179501 + AluSx SINE Alu 135 296 -16 247 256 32 88 chr17 30325240 30325365 -59179188 + L2 LINE L2 3151 3268 -4 29 47 0 0 chr17 30325461 30325504 -59179049 + AT_rich Low_complexity Low_complexity 1 43 0 1654 162 25 35 chr17 30325519 30325833 -59178720 - AluJb SINE Alu -1 311 1 1829 161 3 0 chr17 30325864 30326156 -59178397 + AluSx SINE Alu 1 293 -19 2194 98 0 3 chr17 30326405 30326701 -59177852 + AluSx SINE Alu 1 295 -17 1914 192 31 43 chr17 30326723 30327140 -59177413 + L1M4 LINE L1 4823 5234 -912 1987 141 13 0 chr17 30327140 30327439 -59177114 - AluSx SINE Alu -9 303 1 1914 192 31 43 chr17 30327439 30327536 -59177017 + L1M4 LINE L1 5234 5331 -815 311 217 70 70 chr17 30327538 30327667 -59176886 + L1M4 LINE L1 4183 4311 -1835 809 217 0 50 chr17 30327667 30327781 -59176772 + AluJo SINE Alu 125 226 -86 1921 148 0 3 chr17 30327781 30328079 -59176474 + AluJb SINE Alu 12 308 -4 809 217 0 50 chr17 30328079 30328162 -59176391 + AluJo SINE Alu 226 312 0 1689 117 109 0 chr17 30328214 30328480 -59176073 - AluSq SINE Alu -18 295 1 1980 127 0 14 chr17 30328962 30329254 -59175299 - AluSx SINE Alu -24 288 1 1259 221 66 15 chr17 30329266 30329660 -59174893 + L1M4 LINE L1 4421 4834 -1312 247 288 14 0 chr17 30329673 30329746 -59174807 + G-rich Low_complexity Low_complexity 6 79 0 373 351 35 0 chr17 30329954 30330068 -59174485 - L2 LINE L2 -2 3270 3153 2026 122 7 3 chr17 30330069 30330365 -59174188 + AluSx SINE Alu 1 297 -15 1326 157 50 75 chr17 30330391 30330709 -59173844 - AluJo SINE Alu -2 310 1 316 368 45 65 chr17 30330710 30330944 -59173609 - L2 LINE L2 -1900 1414 1190 2414 66 0 0 chr17 30330944 30331245 -59173308 - AluY SINE Alu -10 301 1 316 368 45 65 chr17 30331245 30331407 -59173146 - L2 LINE L2 -2124 1190 1026 3337 161 12 16 chr17 30331958 30332130 -59172423 - MER41D LTR ERV1 0 557 386 2181 82 7 0 chr17 30332130 30332435 -59172118 - AluSp SINE Alu 0 307 1 3337 161 12 16 chr17 30332435 30332820 -59171733 - MER41D LTR ERV1 -171 386 1 893 184 0 0 chr17 30332945 30333097 -59171456 + AluJb SINE Alu 137 288 -24 2314 72 3 7 chr17 30333676 30333980 -59170573 + AluSp SINE Alu 1 303 -10 26 30 0 0 chr17 30335260 30335293 -59169260 + GC_rich Low_complexity Low_complexity 1 33 0 2169 89 3 19 chr17 30335446 30335762 -59168791 - AluY SINE Alu 0 311 1 211 370 81 61 chr17 30335858 30336204 -59168349 - L2 LINE L2 0 3272 2920 1910 99 33 4 chr17 30336274 30336546 -59168007 + AluSq SINE Alu 1 280 -33 510 275 48 112 chr17 30337037 30337327 -59167226 - MLT1K LTR MaLR -254 334 70 1829 142 32 0 chr17 30337327 30337609 -59166944 - AluJb SINE Alu -21 291 1 510 275 48 112 chr17 30337609 30337674 -59166879 - MLT1K LTR MaLR -518 70 2 185 283 133 0 chr17 30338206 30338266 -59166287 + L2 LINE L2 3204 3271 -1 306 351 90 0 chr17 30338271 30338382 -59166171 - L2 LINE L2 -12 3260 3140 452 247 108 36 chr17 30338402 30338596 -59165957 - MLT1K LTR MaLR -7 581 374 851 80 0 0 chr17 30338664 30338777 -59165776 + AluSg/x SINE Alu 188 300 -9 1703 112 4 16 chr17 30338781 30339030 -59165523 + AluSg SINE Alu 1 246 -64 707 79 0 0 chr17 30339130 30339219 -59165334 - AluS SINE Alu -223 90 2 536 242 86 0 chr17 30339220 30339348 -59165205 + MIR SINE MIR 121 259 -3 520 103 0 0 chr17 30339384 30339452 -59165101 + U4 snRNA snRNA 1 68 -77 1470 186 8 0 chr17 30339457 30339715 -59164838 + AluSx SINE Alu 1 260 -52 279 264 55 22 chr17 30339743 30339834 -59164719 - MLT1K LTR MaLR -290 298 205 725 74 0 0 chr17 30339920 30340015 -59164538 - AluS SINE Alu -216 96 2 2404 35 3 19 chr17 30340127 30340438 -59164115 - AluY SINE Alu -5 306 1 35 41 0 0 chr17 30341351 30341400 -59163153 + GC_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr17 30341461 30341492 -59163061 + GC_rich Low_complexity Low_complexity 1 31 0 275 238 61 102 chr17 30341690 30341767 -59162786 - L2 LINE L2 0 3313 3243 2197 91 0 7 chr17 30341767 30342065 -59162488 + AluY SINE Alu 1 296 -15 275 238 61 102 chr17 30342065 30342134 -59162419 - L2 LINE L2 -70 3243 3173 190 365 18 59 chr17 30342265 30342435 -59162118 - L2 LINE L2 -460 2854 2692 534 216 64 24 chr17 30343795 30343920 -59160633 - MIR3 SINE MIR -21 187 58 401 247 107 27 chr17 30344169 30344319 -59160234 + MIR SINE MIR 100 261 -1 751 237 59 32 chr17 30344354 30344573 -59159980 - MIR SINE MIR -36 226 2 1884 110 4 4 chr17 30344879 30345152 -59159401 - AluSx SINE Alu -39 273 1 272 261 22 43 chr17 30345543 30345635 -59158918 - MIR SINE MIR -27 235 146 2285 60 7 27 chr17 30345696 30345997 -59158556 - AluY SINE Alu -16 295 1 2068 102 17 3 chr17 30346009 30346304 -59158249 - AluSg SINE Alu -11 299 1 2349 62 0 26 chr17 30346312 30346618 -59157935 - AluY SINE Alu -13 298 1 552 263 105 11 chr17 30346899 30347089 -59157464 - MIR SINE MIR -1 261 54 3133 183 39 33 chr17 30347113 30347673 -59156880 - L1MB7 LINE L1 -11 6173 5607 2202 92 0 0 chr17 30347673 30347967 -59156586 - AluY SINE Alu -17 294 1 3133 183 39 33 chr17 30347967 30348074 -59156479 - L1MB7 LINE L1 -577 5607 5502 1994 95 4 0 chr17 30348177 30348451 -59156102 - AluSx SINE Alu -37 275 1 392 250 56 19 chr17 30348494 30348602 -59155951 - MER5B DNA MER1_type -63 115 4 1479 201 25 74 chr17 30348616 30348941 -59155612 + MLT1A2 LTR MaLR 2 306 -68 2204 108 0 0 chr17 30348941 30349246 -59155307 - AluSx SINE Alu -7 305 1 1479 201 25 74 chr17 30349246 30349312 -59155241 + MLT1A2 LTR MaLR 306 374 0 2161 98 0 13 chr17 30349330 30349647 -59154906 - AluSq SINE Alu 0 313 1 1089 85 251 20 chr17 30349648 30349847 -59154706 - AluSg1 SINE Alu -9 300 56 240 270 0 16 chr17 30349934 30349997 -59154556 + MIR SINE MIR 199 260 -2 204 125 0 0 chr17 30350590 30350622 -59153931 + (T)n Simple_repeat Simple_repeat 1 32 0 1609 183 7 3 chr17 30350643 30350943 -59153610 - AluJo SINE Alu -9 303 3 2144 78 0 7 chr17 30351300 30351604 -59152949 - AluSc SINE Alu 0 302 1 1500 165 162 17 chr17 30351879 30352225 -59152328 - MSTD LTR MaLR 0 396 1 2154 103 3 0 chr17 30352261 30352553 -59152000 - AluSg SINE Alu -17 293 1 1180 83 13 0 chr17 30352806 30352963 -59151590 - AluSg/x SINE Alu -16 296 138 1918 84 0 111 chr17 30353066 30353398 -59151155 - AluSx SINE Alu -15 297 3 1514 167 56 0 chr17 30353405 30353692 -59150861 - AluJb SINE Alu -9 303 1 1767 102 3 46 chr17 30353695 30353871 -59150682 - AluSq SINE Alu -3 310 128 2103 114 0 0 chr17 30353871 30354168 -59150385 - AluSg SINE Alu -13 297 1 2289 97 0 0 chr17 30354170 30354479 -59150074 - AluY SINE Alu -2 309 1 1767 102 3 46 chr17 30354479 30354583 -59149970 - AluSq SINE Alu -186 127 39 591 151 226 0 chr17 30354669 30354797 -59149756 + FRAM SINE Alu 24 175 0 427 221 165 136 chr17 30355046 30355422 -59149131 + MLT1K LTR MaLR 202 588 0 2170 107 10 0 chr17 30355457 30355756 -59148797 - AluSx SINE Alu -10 302 1 198 0 0 0 chr17 30355891 30355913 -59148640 + (A)n Simple_repeat Simple_repeat 1 22 0 192 250 177 21 chr17 30356311 30356407 -59148146 - L2 LINE L2 -181 3091 2981 2142 81 0 30 chr17 30356448 30356781 -59147772 - AluY SINE Alu 0 311 1 1150 148 0 6 chr17 30356918 30357100 -59147453 - MLT1F1 LTR MaLR -386 181 1 2121 121 0 10 chr17 30357172 30357486 -59147067 - AluSx SINE Alu -1 311 1 2090 119 0 7 chr17 30357562 30357864 -59146689 - AluSx SINE Alu -10 302 3 329 301 75 34 chr17 30357877 30358023 -59146530 + L2 LINE L2 2359 2510 -804 1627 159 84 22 chr17 30358040 30358360 -59146193 + MER2 DNA MER2_type 6 345 0 285 272 112 8 chr17 30358367 30358492 -59146061 + L2 LINE L2 2551 2688 -626 1049 180 0 0 chr17 30358494 30358672 -59145881 - FRAM SINE Alu -5 171 1 430 97 16 0 chr17 30358778 30358840 -59145713 - AluSq SINE Alu -117 196 134 2186 89 0 42 chr17 30358840 30359009 -59145544 - AluSq SINE Alu -13 300 126 351 0 0 0 chr17 30359009 30359048 -59145505 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2033 84 0 31 chr17 30359048 30359335 -59145218 - AluSg SINE Alu -28 282 5 2186 89 0 42 chr17 30359335 30359477 -59145076 - AluSq SINE Alu -185 128 1 263 308 34 17 chr17 30359493 30359610 -59144943 + L2 LINE L2 2993 3111 -161 242 259 0 0 chr17 30359632 30359686 -59144867 + L2 LINE L2 3214 3267 -5 24 32 0 0 chr17 30359980 30360011 -59144542 + AT_rich Low_complexity Low_complexity 1 31 0 759 137 0 8 chr17 30360013 30360130 -59144423 - FLAM_C SINE Alu -17 116 1 2073 107 0 0 chr17 30360143 30360456 -59144097 - AluSg SINE Alu 0 313 1 189 0 0 0 chr17 30360456 30360477 -59144076 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2027 120 0 0 chr17 30360477 30360761 -59143792 - AluSq SINE Alu -29 284 1 2102 121 0 13 chr17 30360807 30361121 -59143432 - AluSx SINE Alu -2 310 1 808 214 109 5 chr17 30361738 30361939 -59142614 - MIR SINE MIR -36 226 5 2570 55 0 6 chr17 30363727 30364039 -59140514 + AluY SINE Alu 1 310 -1 1891 134 4 4 chr17 30364159 30364428 -59140125 + AluSx SINE Alu 10 278 -34 2489 53 0 31 chr17 30364455 30364776 -59139777 + AluY SINE Alu 1 311 0 333 291 140 22 chr17 30364782 30364961 -59139592 + MIR SINE MIR 57 256 -6 1838 107 3 128 chr17 30365262 30365607 -59138946 + AluSx SINE Alu 1 302 0 1755 84 13 8 chr17 30366470 30366708 -59137845 + AluSc SINE Alu 58 296 -13 2163 112 26 7 chr17 30366718 30367023 -59137530 + AluSq SINE Alu 1 311 -2 385 203 28 63 chr17 30367024 30367167 -59137386 + L1MC5 LINE L1 7649 7786 -175 1626 127 24 106 chr17 30367171 30367502 -59137051 + AluYb8 SINE Alu 6 309 -9 1737 174 3 16 chr17 30367522 30367827 -59136726 + AluJo SINE Alu 5 305 -7 307 219 32 71 chr17 30367828 30367983 -59136570 + L1MC5 LINE L1 7779 7927 -34 313 314 36 18 chr17 30368126 30368346 -59136207 - L2 LINE L2 -1250 2064 1841 379 226 12 0 chr17 30368595 30368679 -59135874 - AluY SINE Alu -1 300 216 634 204 0 0 chr17 30368708 30368821 -59135732 + AluJo/FLAM SINE Alu 6 118 -194 1933 139 7 7 chr17 30368821 30369122 -59135431 - AluSx SINE Alu -11 301 1 309 65 0 0 chr17 30369126 30369172 -59135381 - Alu SINE Alu 0 301 256 1149 30 8 0 chr17 30369451 30369582 -59134971 + AluY SINE Alu 1 132 -179 2189 85 0 51 chr17 30369694 30370010 -59134543 + AluSx SINE Alu 1 300 -12 2503 58 0 0 chr17 30370015 30370307 -59134246 + AluY SINE Alu 1 292 -19 1412 140 92 4 chr17 30371594 30371844 -59132709 + AluSx SINE Alu 38 309 -3 449 170 19 57 chr17 30371844 30371950 -59132603 + L1MD3 LINE L1 7894 7995 0 203 318 116 53 chr17 30372137 30372204 -59132349 - MIR SINE MIR -6 256 195 1649 143 42 31 chr17 30372204 30372491 -59132062 + AluJb SINE Alu 5 294 -18 203 318 116 53 chr17 30372491 30372612 -59131941 - MIR SINE MIR -67 195 56 2313 112 3 0 chr17 30373183 30373488 -59131065 - AluSx SINE Alu -6 306 1 183 80 0 0 chr17 30373580 30373605 -59130948 + (T)n Simple_repeat Simple_repeat 1 25 0 1489 124 0 10 chr17 30373611 30373820 -59130733 - AluSx SINE Alu -105 207 1 472 186 98 0 chr17 30374109 30374211 -59130342 + MER3 DNA MER1_type 94 205 -4 382 285 51 44 chr17 30374436 30374573 -59129980 - MER91A DNA MER1_type -19 177 40 2544 39 0 0 chr17 30374953 30375268 -59129285 + AluY SINE Alu 1 315 0 1302 57 38 0 chr17 30375557 30375715 -59128838 + AluY SINE Alu 127 290 -21 1551 173 28 18 chr17 30375731 30376015 -59128538 + AluJb SINE Alu 7 293 -19 923 251 156 3 chr17 30376034 30376381 -59128172 + L1MB5 LINE L1 3469 3868 -2278 1956 151 0 3 chr17 30376399 30376698 -59127855 + AluSg SINE Alu 1 298 -12 957 203 100 63 chr17 30376700 30376746 -59127807 + L1MB5 LINE L1 4018 4061 -2085 2240 87 13 7 chr17 30376746 30377044 -59127509 + AluSp SINE Alu 1 300 -13 957 203 100 63 chr17 30377044 30377297 -59127256 + L1MB5 LINE L1 4061 4328 -1818 1691 152 42 3 chr17 30377301 30377584 -59126969 + AluJb SINE Alu 6 299 -13 1037 176 6 0 chr17 30377584 30377754 -59126799 + AluJb SINE Alu 134 304 -8 1259 206 49 80 chr17 30377754 30377836 -59126717 + L1MB5 LINE L1 4322 4405 -1741 1733 173 7 17 chr17 30377836 30378137 -59126416 + AluJo SINE Alu 1 298 -14 2266 82 24 0 chr17 30378141 30378433 -59126120 + AluSp SINE Alu 2 300 -13 1259 206 49 80 chr17 30378433 30378779 -59125774 + L1MB5 LINE L1 4408 4743 -1403 1102 215 73 36 chr17 30378779 30379109 -59125444 - MER2 DNA MER2_type -1 343 2 1259 206 49 80 chr17 30379109 30379125 -59125428 + L1MB5 LINE L1 4743 4758 -1388 1744 160 3 70 chr17 30379125 30379437 -59125116 + AluJo SINE Alu 1 291 -21 1912 159 13 0 chr17 30379443 30379744 -59124809 + AluJb SINE Alu 1 305 -7 324 225 0 0 chr17 30379745 30379816 -59124737 + L1MB5 LINE L1 5124 5194 -952 337 197 47 31 chr17 30380180 30380307 -59124246 + L1MB5 LINE L1 5197 5325 -821 2078 123 3 7 chr17 30380315 30380624 -59123929 + AluSx SINE Alu 1 308 -4 195 276 69 0 chr17 30380646 30380704 -59123849 - L2 LINE L2 -4 3309 3248 35 41 0 0 chr17 30381055 30381104 -59123449 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 30381304 30381326 -59123227 + AT_rich Low_complexity Low_complexity 1 22 0 2190 106 0 3 chr17 30381353 30381645 -59122908 - AluSx SINE Alu -17 295 5 3649 151 28 112 chr17 30381978 30382361 -59122192 + L1MB5 LINE L1 5343 5757 -417 1909 116 7 25 chr17 30382361 30382645 -59121908 + AluSx SINE Alu 1 279 -33 3649 151 28 112 chr17 30382645 30382771 -59121782 + L1MB5 LINE L1 5757 5892 -282 2252 116 0 7 chr17 30382771 30383074 -59121479 + AluSx SINE Alu 1 301 -11 2225 108 0 3 chr17 30383080 30383366 -59121187 + AluSx SINE Alu 1 285 -27 3649 151 28 112 chr17 30383366 30383447 -59121106 + L1MB5 LINE L1 5897 5983 -191 2444 76 7 3 chr17 30383447 30383751 -59120802 + AluY SINE Alu 1 305 -6 3649 151 28 112 chr17 30383751 30384010 -59120543 + L1MB5 LINE L1 5983 6124 -50 1990 161 3 0 chr17 30384010 30384315 -59120238 - AluJb SINE Alu -6 306 1 3649 151 28 112 chr17 30384315 30384356 -59120197 + L1MB5 LINE L1 6124 6167 -7 202 224 0 134 chr17 30384503 30384570 -59119983 + MIR SINE MIR 87 144 -64 2237 128 0 0 chr17 30385287 30385592 -59118961 + AluSx SINE Alu 1 305 -7 312 27 0 0 chr17 30385603 30385640 -59118913 + (GGAA)n Simple_repeat Simple_repeat 4 40 0 375 225 203 5 chr17 30385704 30385891 -59118662 + L1ME3 LINE L1 5938 6161 -1 1974 159 0 3 chr17 30385937 30386239 -59118314 + AluSx SINE Alu 1 301 -11 2868 9 0 13 chr17 30386239 30386554 -59117999 + AluYa5 SINE Alu 1 311 0 2362 76 9 22 chr17 30386695 30387010 -59117543 + AluSx SINE Alu 1 311 -1 2232 113 0 7 chr17 30387077 30387379 -59117174 + AluSq SINE Alu 1 300 -13 491 177 89 0 chr17 30387379 30387503 -59117050 - MIR SINE MIR -48 214 80 2475 77 3 0 chr17 30387997 30388295 -59116258 + AluY SINE Alu 1 299 -12 1196 106 19 0 chr17 30388296 30388456 -59116097 + AluSq SINE Alu 132 294 -19 1396 189 12 12 chr17 30388637 30388891 -59115662 - AluJo SINE Alu -9 303 50 277 30 0 0 chr17 30388891 30388924 -59115629 + MER51A-int LTR ERV1 7116 7148 -389 610 110 66 0 chr17 30388924 30389015 -59115538 + LTR54B LTR ERV1 3 99 -399 2220 159 49 0 chr17 30389015 30389385 -59115168 + MER51A-int LTR ERV1 7428 7815 -1 3294 129 65 66 chr17 30389387 30390022 -59114531 + MER51A LTR ERV1 1 634 0 941 146 61 0 chr17 30390361 30390525 -59114028 + L1MD3 LINE L1 7729 7902 -93 277 98 24 0 chr17 30390526 30390567 -59113986 + Alu SINE Alu 1 42 -260 1421 104 0 0 chr17 30390667 30390849 -59113704 - AluSq SINE Alu -131 182 1 1648 197 3 7 chr17 30390933 30391227 -59113326 + AluJo SINE Alu 5 297 -15 2366 86 0 0 chr17 30391348 30391649 -59112904 + AluY SINE Alu 3 303 -8 1768 140 7 7 chr17 30391704 30391976 -59112577 + AluJb SINE Alu 30 301 -11 231 262 145 35 chr17 30392021 30392128 -59112425 - MIR SINE MIR -2 260 166 2336 95 0 19 chr17 30392128 30392443 -59112110 + AluSq SINE Alu 4 312 -1 231 262 145 35 chr17 30392443 30392455 -59112098 - MIR SINE MIR -96 166 157 2251 97 10 3 chr17 30392455 30392755 -59111798 + AluSp SINE Alu 1 302 -11 231 262 145 35 chr17 30392755 30392779 -59111774 - MIR SINE MIR -105 157 100 1247 195 79 14 chr17 30392792 30393069 -59111484 + AluJo SINE Alu 1 295 -17 318 148 0 0 chr17 30393106 30393160 -59111393 + (TA)n Simple_repeat Simple_repeat 2 55 0 233 244 47 23 chr17 30393162 30393248 -59111305 + L1MC4 LINE L1 6616 6703 -1339 248 196 54 0 chr17 30393248 30393304 -59111249 + (CATG)n Simple_repeat Simple_repeat 2 60 0 273 119 0 0 chr17 30393305 30393347 -59111206 + (TA)n Simple_repeat Simple_repeat 2 43 0 2178 103 0 4 chr17 30393358 30393639 -59110914 - AluSg SINE Alu -30 280 1 2348 97 0 10 chr17 30393640 30393948 -59110605 - AluSx SINE Alu -7 305 1 2130 115 27 3 chr17 30393949 30394245 -59110308 - AluSx SINE Alu -9 303 1 1840 159 0 44 chr17 30394993 30395314 -59109239 + AluJb SINE Alu 1 307 -5 1900 146 3 7 chr17 30395405 30395707 -59108846 - AluSx SINE Alu -5 307 7 1608 179 21 17 chr17 30395711 30396001 -59108552 - AluJo SINE Alu -21 291 1 864 129 0 0 chr17 30396025 30396149 -59108404 - FLAM_C SINE Alu -19 124 1 1612 204 17 0 chr17 30396531 30396820 -59107733 - AluJo SINE Alu -18 294 1 1634 157 7 60 chr17 30396868 30397191 -59107362 + AluJb SINE Alu 1 307 0 948 208 0 0 chr17 30397461 30397634 -59106919 + AluJb SINE Alu 137 309 -3 1737 157 44 3 chr17 30398144 30398437 -59106116 - AluSg SINE Alu -5 305 1 975 119 0 8 chr17 30398442 30398576 -59105977 - AluSq/x SINE Alu -180 133 1 21 57 0 0 chr17 30398671 30398706 -59105847 + AT_rich Low_complexity Low_complexity 1 35 0 1567 187 10 17 chr17 30398728 30399017 -59105536 + AluJb SINE Alu 3 289 -23 1638 151 53 33 chr17 30399384 30399683 -59104870 + AluJb SINE Alu 4 308 -4 1571 136 136 98 chr17 30399684 30400082 -59104471 + MSTA LTR MaLR 1 413 -15 1925 149 3 19 chr17 30400117 30400426 -59104127 + AluJo SINE Alu 2 305 -7 478 258 133 0 chr17 30400431 30400582 -59103971 + MER112 DNA MER1_type 90 260 0 2309 96 13 3 chr17 30400915 30401218 -59103335 - AluSq SINE Alu -5 308 3 1111 81 0 7 chr17 30401318 30401454 -59103099 - AluSq/x SINE Alu -177 135 1 1537 169 70 18 chr17 30401457 30401730 -59102823 - AluJo SINE Alu -16 296 10 2189 96 24 0 chr17 30401831 30402123 -59102430 + AluSg SINE Alu 1 299 -11 1838 147 58 12 chr17 30402169 30402495 -59102058 - MER61A LTR ERV1 -2 341 1 17849 99 21 24 chr17 30402524 30404528 -59100025 - MER61A-int LTR ERV1 -45 5172 3133 2284 93 7 3 chr17 30404528 30404830 -59099723 + AluSq SINE Alu 1 303 -10 17849 99 21 24 chr17 30404830 30405736 -59098817 - MER61A-int LTR ERV1 -2084 3133 2226 2013 128 0 0 chr17 30405736 30406041 -59098512 - AluSg SINE Alu 0 305 1 1053 96 7 0 chr17 30406041 30406176 -59098377 - AluSq/x SINE Alu -176 136 1 2242 106 3 3 chr17 30406408 30406711 -59097842 - AluSg SINE Alu -7 303 1 2244 95 0 0 chr17 30406926 30407211 -59097342 + AluSx SINE Alu 9 293 -19 1164 179 33 5 chr17 30407490 30407702 -59096851 - MER20 DNA MER1_type 0 219 2 1438 167 0 117 chr17 30407947 30408289 -59096264 - AluJb SINE Alu 0 302 1 537 206 22 44 chr17 30408297 30408433 -59096120 - L1ME3 LINE L1 0 6162 6030 1277 204 119 15 chr17 30408439 30408708 -59095845 - AluJo SINE Alu -15 297 1 2043 142 0 3 chr17 30408862 30409164 -59095389 - AluJb SINE Alu -7 305 5 913 160 53 43 chr17 30409288 30409476 -59095077 - AluJo SINE Alu -10 302 113 693 139 0 0 chr17 30409536 30409637 -59094916 - AluJ/FLAM SINE Alu -210 102 2 1751 154 34 10 chr17 30409644 30409937 -59094616 - AluSx SINE Alu -12 300 1 1325 215 53 59 chr17 30409944 30410125 -59094428 - L1ME1 LINE L1 0 6184 6003 2184 129 3 3 chr17 30410125 30410434 -59094119 - AluSx SINE Alu -3 309 1 1325 215 53 59 chr17 30410434 30410730 -59093823 - L1ME1 LINE L1 -181 6003 5707 234 0 0 0 chr17 30410730 30410756 -59093797 + (TA)n Simple_repeat Simple_repeat 2 27 0 2475 77 3 0 chr17 30410756 30411054 -59093499 - AluY SINE Alu -12 299 1 1325 215 53 59 chr17 30411054 30411077 -59093476 - L1ME1 LINE L1 -475 5709 5652 491 177 89 0 chr17 30411548 30411672 -59092881 + MIR SINE MIR 80 214 -48 2232 113 0 7 chr17 30411672 30411974 -59092579 - AluSq SINE Alu -13 300 1 2362 76 9 22 chr17 30412041 30412356 -59092197 - AluSx SINE Alu -1 311 1 2868 9 0 13 chr17 30412497 30412812 -59091741 - AluYa5 SINE Alu 0 311 1 1974 159 0 3 chr17 30412812 30413114 -59091439 - AluSx SINE Alu -11 301 1 375 225 203 5 chr17 30413160 30413347 -59091206 - L1ME3 LINE L1 -1 6161 5938 312 27 0 0 chr17 30413411 30413448 -59091105 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 2237 128 0 0 chr17 30413459 30413764 -59090789 - AluSx SINE Alu -7 305 1 221 224 0 134 chr17 30414481 30414548 -59090005 - MIR SINE MIR -64 144 87 313 49 0 0 chr17 30414695 30414736 -59089817 - L1MB5 LINE L1 -7 6167 6127 1972 161 3 0 chr17 30414736 30415041 -59089512 + AluJb SINE Alu 1 306 -6 4948 126 48 15 chr17 30415155 30415459 -59089094 - Tigger1 DNA MER2_type -634 1784 1491 2259 101 3 3 chr17 30415459 30415755 -59088798 - AluSx SINE Alu -16 296 1 2390 83 0 6 chr17 30415764 30416078 -59088475 - AluSp SINE Alu -1 312 1 4948 126 48 15 chr17 30416078 30416557 -59087996 - Tigger1 DNA MER2_type -934 1484 965 478 131 0 0 chr17 30416558 30416619 -59087934 + AluS SINE Alu 3 63 -255 1830 216 111 43 chr17 30416907 30416919 -59087634 - L1 LINE L1 -2171 3975 3965 2223 107 7 0 chr17 30416919 30417219 -59087334 - AluSx SINE Alu -10 302 1 1830 216 111 43 chr17 30417219 30417574 -59086979 - L1 LINE L1 -2181 3965 3636 713 172 16 8 chr17 30417574 30417696 -59086857 + FLAM_C SINE Alu 2 124 -9 1830 216 111 43 chr17 30417696 30417957 -59086596 - L1 LINE L1 -2510 3636 3303 1561 80 10 0 chr17 30417964 30418164 -59086389 + AluSc SINE Alu 1 202 -107 1896 133 6 50 chr17 30418267 30418590 -59085963 + AluSg SINE Alu 1 309 -1 2196 124 13 0 chr17 30418598 30418896 -59085657 + AluSx SINE Alu 1 302 -10 1258 182 101 14 chr17 30419126 30419249 -59085304 - L1MB8 LINE L1 -5 6173 6062 2343 85 0 29 chr17 30419249 30419565 -59084988 - AluY SINE Alu -4 307 1 1258 182 101 14 chr17 30419565 30419738 -59084815 - L1MB8 LINE L1 -116 6062 5851 1908 178 76 29 chr17 30419744 30420133 -59084420 - L1MB8 LINE L1 -743 5403 4989 2283 101 0 3 chr17 30420133 30420431 -59084122 - AluSx SINE Alu -15 297 1 1908 178 76 29 chr17 30420431 30420486 -59084067 - L1MB8 LINE L1 -1157 4989 4938 233 248 134 9 chr17 30420470 30420641 -59083912 + L1MEc LINE L1 2147 2302 -4238 * 281 229 16 0 chr17 30422175 30422236 -59082317 - MER58 DNA MER1_type 0 2420 2359 283 349 0 0 chr17 30422272 30422355 -59082198 - MER58 DNA MER1_type -300 86 4 643 257 81 65 chr17 30422375 30422698 -59081855 - L1MC4 LINE L1 -90 7952 7625 262 361 78 43 chr17 30422944 30423315 -59081238 + L2 LINE L2 2508 2891 -423 2239 107 0 0 chr17 30423345 30423635 -59080918 + AluSg SINE Alu 1 290 -20 2197 114 8 36 chr17 30423899 30424258 -59080295 + L1MA3 LINE L1 5477 5825 -480 1538 105 44 22 chr17 30424258 30424486 -59080067 + AluSq SINE Alu 1 233 -80 1037 126 5 126 chr17 30424770 30424815 -59079738 + AluSg/x SINE Alu 92 141 -171 2009 123 0 75 chr17 30424815 30425149 -59079404 + AluSx SINE Alu 1 309 -3 1037 126 5 126 chr17 30425149 30425309 -59079244 + AluSg/x SINE Alu 141 272 -40 234 0 0 0 chr17 30425615 30425641 -59078912 + (T)n Simple_repeat Simple_repeat 1 26 0 292 252 77 68 chr17 30425826 30425935 -59078618 - L1M4 LINE L1 -2229 3917 3810 1991 133 25 0 chr17 30425935 30426221 -59078332 - AluSx SINE Alu -19 293 1 292 252 77 68 chr17 30426221 30426436 -59078117 - L1M4 LINE L1 -2336 3810 3590 2494 54 3 0 chr17 30427055 30427349 -59077204 - AluY SINE Alu -16 295 1 328 275 7 80 chr17 30427437 30427575 -59076978 - L1ME3A LINE L1 -38 6132 6005 245 27 54 0 chr17 30427581 30427618 -59076935 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2024 134 0 11 chr17 30427620 30427904 -59076649 - AluSx SINE Alu -31 281 1 2153 116 3 3 chr17 30427913 30428214 -59076339 - AluSx SINE Alu -11 301 1 2155 122 0 3 chr17 30428331 30428626 -59075927 - AluSx SINE Alu -18 294 1 792 129 0 9 chr17 30428878 30428994 -59075559 + FLAM_C SINE Alu 2 116 -17 22 0 0 0 chr17 30429012 30429034 -59075519 + AT_rich Low_complexity Low_complexity 1 22 0 2134 143 88 13 chr17 30429086 30429484 -59075069 - L1MB3 LINE L1 -2 6181 5754 237 299 52 31 chr17 30429872 30429969 -59074584 - MER5A DNA MER1_type -51 138 40 250 135 19 0 chr17 30430271 30430323 -59074230 + L1MB7 LINE L1 6132 6184 0 731 171 8 0 chr17 30430501 30430618 -59073935 - Tigger1 DNA MER2_type -1 2417 2300 801 105 60 60 chr17 30430619 30430752 -59073801 + AluSq/x SINE Alu 2 134 -179 5670 143 11 26 chr17 30430776 30431660 -59072893 + Tigger1 DNA MER2_type 1 872 -1546 2048 125 3 28 chr17 30431660 30431979 -59072574 + AluSx SINE Alu 1 311 -1 5670 143 11 26 chr17 30431979 30432008 -59072545 + Tigger1 DNA MER2_type 872 900 -1518 4895 206 34 63 chr17 30432108 30432951 -59071602 + L1MB4 LINE L1 3562 4428 -1718 2109 121 28 0 chr17 30432951 30433241 -59071312 + AluSx SINE Alu 1 298 -14 1693 109 0 0 chr17 30433242 30433472 -59071081 + AluY SINE Alu 82 311 0 4895 206 34 63 chr17 30433472 30434045 -59070508 + L1MB4 LINE L1 4428 4938 -1208 1730 162 0 35 chr17 30434045 30434360 -59070193 + AluJo SINE Alu 1 304 -8 4895 206 34 63 chr17 30434360 30434413 -59070140 + L1MB4 LINE L1 4938 4991 -1155 1135 111 0 7 chr17 30434413 30434595 -59069958 + AluSg/x SINE Alu 130 310 0 1076 154 0 6 chr17 30434611 30434773 -59069780 + AluSx SINE Alu 1 161 -151 2041 43 0 0 chr17 30434773 30435003 -59069550 + AluY SINE Alu 71 300 -11 533 163 0 0 chr17 30435005 30435097 -59069456 + L1MB5 LINE L1 5883 5974 -200 * 2454 185 40 12 chr17 30435092 30435610 -59068943 + L1MB4 LINE L1 5555 6087 -93 1848 171 3 0 chr17 30435886 30436228 -59068325 - AluJb SINE Alu 0 312 1 1670 183 0 14 chr17 30437346 30437652 -59066901 + AluJo SINE Alu 1 302 0 200 239 315 0 chr17 30437677 30437769 -59066784 + MIR SINE MIR 22 142 -120 1341 233 13 19 chr17 30437775 30438088 -59066465 + AluJo SINE Alu 1 311 -1 228 135 0 0 chr17 30438096 30438133 -59066420 + (GGAAA)n Simple_repeat Simple_repeat 3 39 0 334 240 50 20 chr17 30438143 30438243 -59066310 + MIR SINE MIR 157 259 -3 2311 110 0 0 chr17 30438303 30438603 -59065950 - AluSx SINE Alu -12 300 1 214 242 232 42 chr17 30438850 30438945 -59065608 + MIR3 SINE MIR 48 160 -48 182 384 51 36 chr17 30439105 30439243 -59065310 + L2 LINE L2 2970 3109 -163 322 293 103 37 chr17 30439831 30440152 -59064401 + L1M4 LINE L1 4877 5218 -928 207 0 0 0 chr17 30440183 30440206 -59064347 + (A)n Simple_repeat Simple_repeat 1 23 0 2121 110 3 0 chr17 30440206 30440522 -59064031 + AluSx SINE Alu 1 317 0 1785 158 7 28 chr17 30440523 30440814 -59063739 + AluSx SINE Alu 1 285 -27 1112 177 0 6 chr17 30440947 30441122 -59063431 + FAM SINE Alu 1 174 -1 2031 149 0 3 chr17 30441122 30441424 -59063129 + AluSq SINE Alu 1 301 -12 493 183 21 21 chr17 30441424 30441517 -59063036 - MER7A DNA MER2_type -255 91 1 352 267 0 9 chr17 30441518 30441623 -59062930 + L1M4 LINE L1 2854 2957 -3189 1582 90 0 0 chr17 30441623 30441824 -59062729 + AluY SINE Alu 3 203 -108 2154 220 74 67 chr17 30441824 30442761 -59061792 + L1M4 LINE L1 3081 4010 -2136 756 81 61 0 chr17 30442761 30442860 -59061693 + U6 snRNA snRNA 1 105 -2 1414 78 6 0 chr17 30442860 30443039 -59061514 + L1MA1 LINE L1 6123 6302 0 2154 220 74 67 chr17 30443039 30443580 -59060973 + L1M4 LINE L1 4009 4730 -1416 2146 106 10 0 chr17 30444036 30444328 -59060225 - AluSx SINE Alu -17 295 1 1017 99 0 0 chr17 30445256 30445387 -59059166 - AluSq/x SINE Alu -182 131 1 309 105 0 10 chr17 30445398 30445447 -59059106 - L1M4 LINE L1 -351 5815 5773 232 178 0 0 chr17 30445758 30445803 -59058750 + A-rich Low_complexity Low_complexity 1 45 0 1637 170 31 50 chr17 30445805 30446123 -59058430 + AluJb SINE Alu 1 312 0 2208 83 3 17 chr17 30446287 30446596 -59057957 - AluSp SINE Alu 0 305 1 1087 142 0 6 chr17 30446675 30446837 -59057716 - AluSc SINE Alu -17 292 132 2143 123 7 0 chr17 30446837 30447138 -59057415 - AluSp SINE Alu -10 303 1 1861 123 51 10 chr17 30447167 30447327 -59057226 - AluSx SINE Alu -7 305 153 2421 74 0 7 chr17 30447327 30447625 -59056928 - AluY SINE Alu -15 296 1 1861 123 51 10 chr17 30447625 30447757 -59056796 - AluSx SINE Alu -159 153 1 445 319 38 6 chr17 30448041 30448198 -59056355 + L2 LINE L2 2898 3059 -254 1833 163 7 0 chr17 30448202 30448491 -59056062 - AluSx SINE Alu -19 293 3 908 150 6 60 chr17 30448552 30448719 -59055834 + AluJb SINE Alu 23 180 -132 2220 86 3 16 chr17 30448947 30449250 -59055303 - AluY SINE Alu -12 299 1 2189 92 0 20 chr17 30449260 30449554 -59054999 - AluSx SINE Alu -24 288 1 1917 149 3 19 chr17 30449682 30449990 -59054563 - AluJb SINE Alu -7 305 3 1593 164 27 0 chr17 30450231 30450517 -59054036 - AluJo SINE Alu 0 306 14 324 0 0 0 chr17 30450600 30450636 -59053917 + (CA)n Simple_repeat Simple_repeat 2 37 0 7066 55 19 13 chr17 30451707 30453209 -59051344 + SVA Other Other 23 1376 -10 347 248 0 92 chr17 30453290 30453399 -59051154 + MER58 DNA MER1_type 1 99 -116 2566 57 0 0 chr17 30453406 30453706 -59050847 + AluY SINE Alu 2 301 -10 305 143 191 0 chr17 30453723 30453786 -59050767 + MER58 DNA MER1_type 2318 2392 -28 214 178 0 0 chr17 30453939 30453984 -59050569 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 2222 105 0 3 chr17 30454056 30454351 -59050202 - AluY SINE Alu -17 294 1 1610 173 10 23 chr17 30454882 30455182 -59049371 - AluJb SINE Alu -6 306 11 1719 167 10 26 chr17 30455239 30455544 -59049009 + AluJb SINE Alu 1 300 -12 881 177 38 0 chr17 30455773 30455931 -59048622 - AluSg/x SINE Alu -18 292 129 2417 86 0 13 chr17 30455931 30456245 -59048308 - AluSg SINE Alu 0 310 1 2418 81 0 0 chr17 30456925 30457222 -59047331 + AluY SINE Alu 1 297 -14 2042 124 0 3 chr17 30457228 30457508 -59047045 + AluSg SINE Alu 1 281 -29 180 0 0 0 chr17 30457508 30457528 -59047025 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 1942 127 0 27 chr17 30457547 30457846 -59046707 + AluSx SINE Alu 1 291 -21 1791 165 16 13 chr17 30458063 30458366 -59046187 + AluJo SINE Alu 4 307 -5 2262 95 0 16 chr17 30458371 30458687 -59045866 + AluY SINE Alu 1 311 0 540 185 108 0 chr17 30459366 30459496 -59045057 - L1ME4a LINE L1 0 6121 5978 2140 114 0 16 chr17 30459501 30459809 -59044744 - AluSx SINE Alu -5 307 5 1332 147 13 108 chr17 30459935 30460241 -59044312 + AluSx SINE Alu 12 288 -24 1685 132 0 98 chr17 30460912 30461131 -59043422 - AluY SINE Alu 0 311 149 2360 93 3 0 chr17 30461131 30461442 -59043111 - AluSp SINE Alu -1 312 1 1685 132 0 98 chr17 30461442 30461578 -59042975 - AluY SINE Alu -162 149 1 2170 110 0 0 chr17 30461669 30461982 -59042571 - AluSx SINE Alu 0 312 1 968 182 5 31 chr17 30462012 30462204 -59042349 + L1PB4 LINE L1 5968 6154 -2 8371 90 8 9 chr17 30462318 30463431 -59041122 - HERV9 LTR ERV1 -6126 2273 1162 324 335 50 105 chr17 30463551 30464106 -59040447 + L2 LINE L2 2719 3272 0 1954 132 20 20 chr17 30465362 30465657 -59038896 - AluJo SINE Alu -17 295 1 31 26 0 0 chr17 30465660 30465698 -59038855 + AT_rich Low_complexity Low_complexity 1 38 0 1190 93 0 0 chr17 30466108 30466259 -59038294 + AluSp/q SINE Alu 163 313 0 402 212 95 78 chr17 30466295 30466578 -59037975 - L1MC4a LINE L1 -1780 6028 5741 1201 210 93 3 chr17 30466581 30466872 -59037681 - L1MC4a LINE L1 -2166 5642 5326 2257 73 3 18 chr17 30466883 30467189 -59037364 - AluY SINE Alu 0 302 1 2300 99 3 0 chr17 30467205 30467489 -59037064 - AluSc SINE Alu -24 285 1 288 309 32 49 chr17 30467540 30467631 -59036922 + MIR SINE MIR 26 116 -146 2312 102 0 3 chr17 30467631 30467926 -59036627 - AluSc SINE Alu -15 294 1 288 309 32 49 chr17 30467926 30467957 -59036596 + MIR SINE MIR 116 146 -116 851 186 36 18 chr17 30468369 30468536 -59036017 + AluJo SINE Alu 120 289 -23 2167 107 28 3 chr17 30468651 30468941 -59035612 - AluSg SINE Alu -13 297 1 1470 148 27 70 chr17 30469015 30469346 -59035207 - L1MC1 LINE L1 -12 6321 6005 1179 20 34 7 chr17 30470261 30470408 -59034145 + L1PA13 LINE L1 6011 6161 -2 200 312 140 32 chr17 30471763 30471949 -59032604 - L2 LINE L2 -1314 2000 1795 538 85 0 0 chr17 30471953 30472035 -59032518 - AluSp/q SINE Alu -4 309 228 1024 189 6 0 chr17 30472200 30472369 -59032184 + FAM SINE Alu 1 170 -5 2291 90 10 13 chr17 30472372 30472672 -59031881 + AluSp SINE Alu 1 299 -14 528 194 105 144 chr17 30472674 30472803 -59031750 + L1MC4 LINE L1 7517 7650 -392 2005 122 40 16 chr17 30472803 30473106 -59031447 + AluJo SINE Alu 1 310 -2 2362 87 3 3 chr17 30473113 30473412 -59031141 + AluSq SINE Alu 1 299 -14 2032 133 35 0 chr17 30473415 30473700 -59030853 + AluSx SINE Alu 1 295 -17 528 194 105 144 chr17 30473700 30474017 -59030536 + L1MC4 LINE L1 7658 7957 -85 2217 107 0 3 chr17 30474206 30474497 -59030056 + AluSg SINE Alu 1 290 -20 596 286 79 20 chr17 30474562 30474814 -59029739 - L2 LINE L2 -8 3305 3039 295 288 61 38 chr17 30474816 30474948 -59029605 + MIR SINE MIR 80 214 -48 2491 66 3 3 chr17 30475279 30475582 -59028971 + AluY SINE Alu 1 303 -8 347 227 125 0 chr17 30475745 30475833 -59028720 - L2 LINE L2 -5 3267 3169 296 248 95 29 chr17 30476401 30476506 -59028047 + L2 LINE L2 3159 3270 -2 195 286 0 0 chr17 30476585 30476627 -59027926 + MIR SINE MIR 34 75 -133 2204 130 0 3 chr17 30476794 30477093 -59027460 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr17 30477701 30477723 -59026830 + AT_rich Low_complexity Low_complexity 1 22 0 2131 115 3 16 chr17 30477726 30478039 -59026514 + AluSg SINE Alu 1 309 -1 899 197 35 5 chr17 30478112 30478315 -59026238 - L1MB8 LINE L1 0 6178 5970 788 232 6 0 chr17 30478347 30478524 -59026029 - L1MB8 LINE L1 -445 5733 5556 2361 91 3 0 chr17 30478524 30478821 -59025732 - AluSq SINE Alu -15 298 1 28 0 0 0 chr17 30478829 30478857 -59025696 + AT_rich Low_complexity Low_complexity 1 28 0 334 280 155 16 chr17 30480128 30480321 -59024232 + L3b LINE CR1 1163 1382 -201 394 250 159 28 chr17 30480678 30480854 -59023699 - L3b LINE CR1 -68 1515 1317 1096 165 46 60 chr17 30481041 30481259 -59023294 + AluJb SINE Alu 46 260 -52 249 289 164 0 chr17 30481391 30481495 -59023058 + MER96 DNA MER1_type? 9 129 -46 2288 101 0 7 chr17 30481527 30481823 -59022730 - AluSg SINE Alu -16 294 1 1120 112 0 0 chr17 30481824 30481967 -59022586 - AluSq/x SINE Alu -170 143 1 391 315 62 15 chr17 30481985 30482115 -59022438 + L2 LINE L2 3136 3271 -1 2265 98 10 0 chr17 30482717 30483013 -59021540 + AluSq SINE Alu 1 299 -14 245 240 0 0 chr17 30483018 30483068 -59021485 + MER66B LTR ERV1 299 348 -138 590 158 0 0 chr17 30483307 30483402 -59021151 - AluSg/x SINE Alu -4 308 214 2317 64 43 0 chr17 30483410 30483692 -59020861 - AluY SINE Alu -17 294 1 2273 107 0 0 chr17 30483887 30484177 -59020376 + AluSg SINE Alu 1 290 -20 417 299 73 6 chr17 30485364 30485528 -59019025 + MIR SINE MIR 20 194 -68 969 246 144 50 chr17 30485795 30485851 -59018702 - LTR33 LTR ERVL -4 517 468 2243 74 33 0 chr17 30485851 30486158 -59018395 - AluSc SINE Alu 0 316 1 969 246 144 50 chr17 30486158 30486563 -59017990 - LTR33 LTR ERVL -53 468 10 1916 110 4 4 chr17 30486891 30487146 -59017407 + AluSq SINE Alu 1 255 -58 900 105 24 0 chr17 30487146 30487270 -59017283 + AluY SINE Alu 170 296 -15 229 288 104 24 chr17 30487280 30487405 -59017148 - MLT1L LTR MaLR -476 139 5 24 0 0 0 chr17 30488721 30488745 -59015808 + AT_rich Low_complexity Low_complexity 1 24 0 459 157 11 67 chr17 30488753 30488842 -59015711 - FLAM_A SINE Alu -41 101 18 549 103 0 0 chr17 30488980 30489058 -59015495 + U6 snRNA snRNA 1 78 -29 31 0 0 0 chr17 30489060 30489091 -59015462 + AT_rich Low_complexity Low_complexity 1 31 0 1606 106 0 5 chr17 30489472 30489679 -59014874 + AluSx SINE Alu 1 206 -106 234 164 18 0 chr17 30489772 30489827 -59014726 + L1ME3 LINE L1 5896 5951 -211 2615 43 7 3 chr17 30490307 30490610 -59013943 + AluY SINE Alu 1 304 -7 1661 145 33 40 chr17 30491837 30492121 -59012432 + AluJo SINE Alu 1 284 -28 477 0 0 0 chr17 30492121 30492174 -59012379 + (TG)n Simple_repeat Simple_repeat 2 54 0 1661 145 33 40 chr17 30492174 30492192 -59012361 + AluJo SINE Alu 284 301 -11 281 271 91 104 chr17 30492434 30492543 -59012010 - L1MC/D LINE L1 -1992 5816 5707 2245 119 0 3 chr17 30492543 30492853 -59011700 - AluSx SINE Alu -3 309 1 281 271 91 104 chr17 30492853 30492874 -59011679 - L1MC/D LINE L1 -2101 5707 5687 1985 147 6 10 chr17 30492874 30493187 -59011366 - AluJb SINE Alu 0 312 1 281 271 91 104 chr17 30493187 30493325 -59011228 - L1MC/D LINE L1 -2121 5687 5549 1626 137 60 4 chr17 30493325 30493574 -59010979 + AluSx SINE Alu 40 302 -10 281 271 91 104 chr17 30493574 30493753 -59010800 - L1MC/D LINE L1 -2259 5549 5373 23 0 0 0 chr17 30494840 30494863 -59009690 + AT_rich Low_complexity Low_complexity 1 23 0 2504 50 0 17 chr17 30494978 30495278 -59009275 + AluY SINE Alu 1 295 -16 2196 102 7 3 chr17 30495484 30495769 -59008784 + AluSg SINE Alu 1 286 -24 2423 71 0 7 chr17 30495835 30496152 -59008401 + AluSc SINE Alu 1 309 0 221 0 35 0 chr17 30502729 30502758 -59001795 + (TC)n Simple_repeat Simple_repeat 2 31 0 214 195 0 0 chr17 30504378 30504419 -59000134 + T-rich Low_complexity Low_complexity 1 41 0 818 229 21 54 chr17 30505903 30506077 -58998476 + MIR SINE MIR 1 166 -96 2251 118 0 13 chr17 30506077 30506391 -58998162 - AluSx SINE Alu -2 310 1 818 229 21 54 chr17 30506391 30506456 -58998097 + MIR SINE MIR 166 232 -30 309 271 140 9 chr17 30510627 30510734 -58993819 + MIR SINE MIR 20 140 -68 216 273 218 15 chr17 30514081 30514270 -58990283 + MIR SINE MIR 20 254 -8 478 287 44 11 chr17 30519616 30519797 -58984756 - MER117 DNA MER1_type -3 194 8 273 57 0 0 chr17 30520140 30520175 -58984378 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 499 236 32 8 chr17 30520175 30520298 -58984255 - L2 LINE L2 -13 3300 3175 2210 84 10 3 chr17 30520473 30520771 -58983782 - AluSx SINE Alu -12 300 1 718 250 35 6 chr17 30520787 30520959 -58983594 + MIR SINE MIR 16 192 -70 272 174 0 72 chr17 30520983 30521052 -58983501 + MIR SINE MIR 130 193 -69 531 289 254 3 chr17 30522095 30522410 -58982143 - L2 LINE L2 0 3313 2920 2044 130 0 16 chr17 30523600 30523915 -58980638 - AluSx SINE Alu 0 312 3 297 107 0 36 chr17 30523930 30523986 -58980567 - FAM SINE Alu 0 179 126 1102 126 0 0 chr17 30524324 30524475 -58980078 - AluSc SINE Alu -158 151 1 337 336 18 9 chr17 30524486 30524583 -58979970 - L1ME LINE L1 -301 5820 5720 1622 137 0 12 chr17 30524583 30524824 -58979729 - AluSx SINE Alu -11 301 64 337 336 18 9 chr17 30524824 30524836 -58979717 - L1ME LINE L1 -401 5720 5710 341 352 25 5 chr17 30524857 30525053 -58979500 - L1ME LINE L1 -2083 5725 5526 2013 138 0 25 chr17 30525235 30525554 -58978999 - AluSx SINE Alu -1 311 1 2055 143 0 6 chr17 30525716 30526030 -58978523 + AluJb SINE Alu 1 312 0 286 170 13 137 chr17 30526551 30526704 -58977849 + AluSq/x SINE Alu 3 136 -166 1000 161 11 11 chr17 30526849 30527023 -58977530 - AluJb SINE Alu -134 178 5 1817 123 0 105 chr17 30527143 30527485 -58977068 + AluSx SINE Alu 7 312 0 992 253 111 28 chr17 30528863 30529370 -58975183 + L1M4 LINE L1 4591 5139 -1007 2208 199 51 0 chr17 30529383 30529875 -58974678 - L1MB5 LINE L1 -1 6173 5657 4426 148 38 15 chr17 30529896 30530687 -58973866 - L1MA7 LINE L1 -12 6279 5471 1398 154 9 5 chr17 30530696 30530917 -58973636 - AluSg/x SINE Alu -20 292 71 2279 103 0 0 chr17 30530917 30531219 -58973334 - AluSq SINE Alu -11 302 1 518 181 0 11 chr17 30531219 30531313 -58973240 - MER2 DNA MER2_type -252 93 1 323 239 22 0 chr17 30531313 30531405 -58973148 + L1ME2 LINE L1 6050 6143 -21 316 350 34 60 chr17 30531907 30531937 -58972616 - HAL1 LINE L1 -1309 1198 1169 2300 83 6 13 chr17 30531937 30532251 -58972302 - AluSx SINE Alu 0 312 1 316 350 34 60 chr17 30532251 30532335 -58972218 - HAL1 LINE L1 -1338 1169 1084 1998 138 0 31 chr17 30532335 30532513 -58972040 - AluJb SINE Alu -3 309 144 2042 126 0 0 chr17 30532513 30532806 -58971747 - AluSx SINE Alu -15 297 5 1998 138 0 31 chr17 30532806 30532946 -58971607 - AluJb SINE Alu -168 144 1 316 350 34 60 chr17 30532946 30533064 -58971489 - HAL1 LINE L1 -1423 1084 971 2436 75 0 0 chr17 30533219 30533524 -58971029 - AluY SINE Alu -6 305 1 1633 184 14 0 chr17 30534193 30534475 -58970078 - AluJo SINE Alu -14 298 13 1779 167 0 13 chr17 30534585 30534884 -58969669 - AluJb SINE Alu -16 296 2 1344 162 9 123 chr17 30535197 30535537 -58969016 - AluJb SINE Alu -11 301 1 1493 176 58 3 chr17 30535537 30535884 -58968669 - L1MB4 LINE L1 -39 6141 5776 2047 85 4 7 chr17 30535885 30536156 -58968397 - AluSc SINE Alu -15 294 25 1120 138 11 11 chr17 30536303 30536484 -58968069 + AluJb SINE Alu 105 285 -27 330 330 22 0 chr17 30536485 30536576 -58967977 + L1MC4 LINE L1 6614 6706 -1336 1129 290 59 57 chr17 30536624 30537123 -58967430 + L1MEc LINE L1 159 656 -5740 2257 109 0 3 chr17 30537123 30537436 -58967117 + AluSx SINE Alu 1 312 0 1129 290 59 57 chr17 30537436 30537457 -58967096 + L1MEc LINE L1 656 675 -5721 1937 140 3 3 chr17 30537457 30537749 -58966804 + AluJb SINE Alu 1 292 -20 1129 290 59 57 chr17 30537749 30537906 -58966647 + L1MEc LINE L1 675 838 -5558 835 153 21 47 chr17 30537906 30538096 -58966457 + AluJb SINE Alu 122 306 -6 1489 244 60 101 chr17 30538096 30538426 -58966127 + L1MEc LINE L1 843 1185 -5211 1589 122 39 16 chr17 30538426 30538523 -58966030 + AluJo SINE Alu 23 116 -196 234 0 0 0 chr17 30538523 30538549 -58966004 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 1589 122 39 16 chr17 30538549 30538705 -58965848 + AluJo SINE Alu 116 282 -30 1489 244 60 101 chr17 30538705 30538816 -58965737 + L1MEc LINE L1 1185 1299 -5097 2219 106 3 6 chr17 30538816 30539127 -58965426 + AluSg SINE Alu 1 310 0 1489 244 60 101 chr17 30539127 30539164 -58965389 + L1MEc LINE L1 1299 1336 -5060 1284 224 173 43 chr17 30539164 30539552 -58965001 + MLT1D LTR MaLR 1 456 -49 2523 53 0 0 chr17 30539552 30539852 -58964701 - AluY SINE Alu -11 300 1 1284 224 173 43 chr17 30539852 30539909 -58964644 + MLT1D LTR MaLR 456 504 -1 1489 244 60 101 chr17 30539909 30540430 -58964123 + L1MEc LINE L1 1336 1803 -4593 2291 90 0 0 chr17 30540444 30540744 -58963809 + AluSx SINE Alu 1 300 -12 1803 142 27 3 chr17 30540749 30541045 -58963508 + AluJb SINE Alu 1 303 -9 768 274 138 73 chr17 30541061 30541792 -58962761 + HAL1 LINE L1 102 899 -1608 2596 45 0 0 chr17 30541792 30542103 -58962450 + AluY SINE Alu 1 311 0 768 274 138 73 chr17 30542103 30542233 -58962320 + HAL1 LINE L1 899 1019 -1488 702 303 98 25 chr17 30542405 30542722 -58961831 + L2 LINE L2 2448 2787 -527 461 272 283 25 chr17 30542768 30543051 -58961502 + L2 LINE L2 2958 3313 0 1978 134 3 16 chr17 30543130 30543436 -58961117 + AluJb SINE Alu 11 312 0 263 120 0 20 chr17 30543436 30543486 -58961067 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 274 277 158 28 chr17 30543486 30543663 -58960890 + HAL1 LINE L1 2308 2507 0 31 26 0 0 chr17 30543664 30543702 -58960851 + AT_rich Low_complexity Low_complexity 1 38 0 205 274 32 16 chr17 30546728 30546790 -58957763 + L2 LINE L2 3186 3248 -65 25 90 0 0 chr17 30548175 30548242 -58956311 + GC_rich Low_complexity Low_complexity 1 67 0 26 0 0 0 chr17 30548383 30548409 -58956144 + GC_rich Low_complexity Low_complexity 1 26 0 267 163 48 48 chr17 30548429 30548595 -58955958 + (CGCGG)n Simple_repeat Simple_repeat 5 170 0 33 85 0 0 chr17 30548698 30548780 -58955773 + GC_rich Low_complexity Low_complexity 1 82 0 271 285 133 46 chr17 30549663 30549814 -58954739 + MIR SINE MIR 28 191 -71 30 45 0 0 chr17 30552264 30552308 -58952245 + GC_rich Low_complexity Low_complexity 1 44 0 253 209 27 45 chr17 30552383 30552493 -58952060 + (CGGG)n Simple_repeat Simple_repeat 4 111 0 47 53 0 0 chr17 30552498 30552573 -58951980 + GC_rich Low_complexity Low_complexity 1 75 0 33 66 0 0 chr17 30552668 30552729 -58951824 + GC_rich Low_complexity Low_complexity 1 61 0 271 363 48 30 chr17 30554181 30554349 -58950204 + MIR3 SINE MIR 38 208 0 266 311 22 33 chr17 30554592 30554682 -58949871 + L2 LINE L2 3170 3258 -14 659 228 35 53 chr17 30555443 30555552 -58949001 - L1ME3 LINE L1 -7 6155 6046 1345 97 46 84 chr17 30555552 30555790 -58948763 + MER30 DNA MER1_type 2 230 0 659 228 35 53 chr17 30555790 30555908 -58948645 - L1ME3 LINE L1 -116 6046 5932 512 16 0 0 chr17 30556968 30557031 -58947522 + AluY SINE Alu 239 301 -9 248 316 0 0 chr17 30557647 30557723 -58946830 + MIR SINE MIR 58 133 -129 226 321 82 37 chr17 30558205 30558339 -58946214 + MIR SINE MIR 122 261 -1 333 234 0 90 chr17 30558701 30558812 -58945741 + MIR3 SINE MIR 61 161 -47 450 240 0 25 chr17 30559495 30559616 -58944937 + MIR SINE MIR 51 168 -94 2361 66 6 22 chr17 30560912 30561229 -58943324 + AluSp SINE Alu 1 312 -1 512 313 43 19 chr17 30561744 30561952 -58942601 - L2 LINE L2 -5 3267 3055 494 268 87 0 chr17 30562113 30562251 -58942302 + MIR SINE MIR 65 214 -48 1569 139 91 15 chr17 30562253 30562527 -58942026 - AluJo SINE Alu -17 295 1 295 343 96 0 chr17 30562578 30562724 -58941829 - L2 LINE L2 -565 2749 2590 1259 68 43 0 chr17 30571472 30571634 -58932919 - AluSc SINE Alu -15 294 126 270 0 0 0 chr17 30571634 30571664 -58932889 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1775 95 25 104 chr17 30571668 30571985 -58932568 - AluYb8 SINE Alu -26 292 1 228 35 0 0 chr17 30572384 30572413 -58932140 + (TA)n Simple_repeat Simple_repeat 1 29 0 2189 85 39 0 chr17 30572413 30572691 -58931862 - AluSx SINE Alu -21 291 3 22 35 0 0 chr17 30573743 30573772 -58930781 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr17 30574533 30574554 -58929999 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 23 0 0 0 chr17 30575807 30575830 -58928723 + AT_rich Low_complexity Low_complexity 1 23 0 188 197 0 16 chr17 30578010 30578071 -58926482 + (CATA)n Simple_repeat Simple_repeat 3 62 0 183 42 0 0 chr17 30580178 30580202 -58924351 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 303 28 0 0 chr17 30581108 30581144 -58923409 - U2 snRNA snRNA -152 36 1 215 271 0 0 chr17 30581454 30581502 -58923051 + (TA)n Simple_repeat Simple_repeat 2 49 0 1121 131 5 26 chr17 30582367 30582558 -58921995 - L1PB4 LINE L1 -2 6154 5968 2367 93 0 3 chr17 30582588 30582899 -58921654 + AluY SINE Alu 1 310 -1 1236 109 0 6 chr17 30582915 30583089 -58921464 + AluSg/x SINE Alu 123 295 -17 843 229 36 52 chr17 30583417 30583638 -58920915 - MIR SINE MIR -11 251 33 2420 68 0 0 chr17 30583638 30583932 -58920621 - AluY SINE Alu -17 294 1 843 229 36 52 chr17 30583932 30583959 -58920594 - MIR SINE MIR -229 33 7 2267 120 0 0 chr17 30584843 30585144 -58919409 + AluSx SINE Alu 1 301 -11 2474 76 3 0 chr17 30585432 30585735 -58918818 - AluY SINE Alu -7 304 1 2326 78 7 0 chr17 30587143 30587461 -58917092 - AluSp SINE Alu 0 320 1 552 130 0 0 chr17 30587461 30587538 -58917015 - AluSp/q SINE Alu -17 296 220 2230 109 0 26 chr17 30587694 30587997 -58916556 + AluSx SINE Alu 1 295 -17 2159 123 10 3 chr17 30588280 30588582 -58915971 - AluSx SINE Alu -3 309 6 2113 137 6 6 chr17 30588601 30588914 -58915639 - AluSq SINE Alu 0 313 1 297 98 0 0 chr17 30588943 30588984 -58915569 + AluJo/FLAM SINE Alu 86 126 -176 337 111 0 0 chr17 30588986 30589040 -58915513 + FAM SINE Alu 126 179 0 1994 134 7 0 chr17 30589047 30589337 -58915216 + AluSc SINE Alu 1 292 -17 1229 143 21 149 chr17 30589339 30589675 -58914878 + AluJb SINE Alu 1 293 -9 2216 112 7 0 chr17 30590262 30590547 -58914006 - AluSx SINE Alu -25 287 1 2314 125 0 0 chr17 30590757 30591068 -58913485 + AluSx SINE Alu 1 311 -1 1716 172 10 23 chr17 30591159 30591461 -58913092 - AluJo SINE Alu -3 309 12 741 212 0 0 chr17 30591508 30591640 -58912913 + FLAM_C SINE Alu 2 133 0 1940 181 0 9 chr17 30591649 30591784 -58912769 + AluJo SINE Alu 1 136 -176 2186 102 20 3 chr17 30591784 30592077 -58912476 + AluSx SINE Alu 1 298 -14 1940 181 0 9 chr17 30592077 30592256 -58912297 + AluJo SINE Alu 136 312 0 2717 32 0 19 chr17 30593162 30593474 -58911079 - AluY SINE Alu -5 306 1 210 37 0 0 chr17 30593479 30593506 -58911047 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 848 141 0 8 chr17 30593506 30593634 -58910919 - AluSg/x SINE Alu -32 280 154 1918 132 42 0 chr17 30593736 30594024 -58910529 + AluSx SINE Alu 1 300 -12 200 254 9 26 chr17 30595198 30595312 -58909241 + (CCCG)n Simple_repeat Simple_repeat 2 113 0 27 62 0 0 chr17 30596472 30596520 -58908033 + GC_rich Low_complexity Low_complexity 1 48 0 23 68 0 0 chr17 30596779 30596823 -58907730 + GC_rich Low_complexity Low_complexity 1 44 0 28 71 0 0 chr17 30596859 30596915 -58907638 + GC_rich Low_complexity Low_complexity 1 56 0 1875 157 3 14 chr17 30598318 30598612 -58905941 + AluJo SINE Alu 1 291 -21 27 0 0 0 chr17 30598652 30598679 -58905874 + AT_rich Low_complexity Low_complexity 1 27 0 1853 146 10 17 chr17 30598682 30598976 -58905577 - AluSx SINE Alu -20 292 1 635 181 0 51 chr17 30598977 30599115 -58905438 - AluJ SINE Alu -16 296 166 1260 189 0 0 chr17 30599186 30599377 -58905176 - AluJ SINE Alu -121 191 1 366 251 36 119 chr17 30599958 30600056 -58904497 - Charlie8 DNA MER1_type -131 210 106 2317 85 0 0 chr17 30600056 30600369 -58904184 - AluSc SINE Alu 0 313 1 210 37 0 0 chr17 30600376 30600403 -58904150 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1625 150 29 25 chr17 30600410 30600684 -58903869 - AluJb SINE Alu -37 275 1 366 251 36 119 chr17 30600684 30600787 -58903766 - Charlie8 DNA MER1_type -247 94 10 2517 82 0 0 chr17 30602995 30603299 -58901254 + AluY SINE Alu 1 304 -7 1381 167 18 0 chr17 30604189 30604416 -58900137 + AluJb SINE Alu 1 231 -81 1544 156 80 43 chr17 30604573 30604874 -58899679 + AluJb SINE Alu 1 312 0 2464 93 3 0 chr17 30605195 30605506 -58899047 + AluSp SINE Alu 1 312 -1 704 164 19 6 chr17 30605515 30605674 -58898879 + GA-rich Low_complexity Low_complexity 3 163 0 2062 163 0 0 chr17 30605680 30605981 -58898572 + AluJb SINE Alu 1 301 -11 242 306 100 38 chr17 30606361 30606521 -58898032 + L3 LINE CR1 1401 1570 -7 889 197 0 0 chr17 30606695 30606847 -58897706 - AluJb SINE Alu -17 295 144 1855 165 0 14 chr17 30606863 30607169 -58897384 - AluJb SINE Alu 0 303 2 2394 64 40 0 chr17 30607236 30607532 -58897021 - AluY SINE Alu -3 308 1 194 286 121 50 chr17 30608076 30608216 -58896337 + MIR SINE MIR 49 198 -64 200 283 117 0 chr17 30608557 30608617 -58895936 - MIR SINE MIR -95 113 47 266 184 158 26 chr17 30608764 30608840 -58895713 - MER91C DNA MER1_type -35 105 20 2195 129 3 0 chr17 30609027 30609322 -58895231 - AluSx SINE Alu -16 296 1 680 184 0 24 chr17 30609451 30609576 -58894977 - FLAM_A SINE Alu -8 125 4 186 138 138 69 chr17 30609649 30609675 -58894878 + MIR SINE MIR 46 69 -193 1762 181 0 21 chr17 30609675 30609962 -58894591 - AluJb SINE Alu -31 281 1 186 138 138 69 chr17 30609962 30609993 -58894560 + MIR SINE MIR 69 107 -155 1026 135 18 0 chr17 30610102 30610272 -58894281 - AluY SINE Alu -3 308 136 208 83 0 56 chr17 30610312 30610319 -58894234 + (TTTTC)n Simple_repeat Simple_repeat 2 8 -27 1996 145 10 10 chr17 30610319 30610630 -58893923 + AluSx SINE Alu 1 311 -1 208 83 0 56 chr17 30610630 30610658 -58893895 + (TTTTC)n Simple_repeat Simple_repeat 8 35 0 2642 33 0 20 chr17 30611811 30612115 -58892438 - AluY SINE Alu -13 298 1 183 42 0 0 chr17 30612123 30612147 -58892406 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2241 77 40 10 chr17 30612933 30613230 -58891323 - AluSg SINE Alu -4 306 1 305 268 179 8 chr17 30613397 30613520 -58891033 - MIR SINE MIR -26 236 93 233 29 0 29 chr17 30613552 30613587 -58890966 + (TC)n Simple_repeat Simple_repeat 1 34 0 1876 138 0 24 chr17 30613594 30613883 -58890670 - AluJo SINE Alu -30 282 1 182 280 60 0 chr17 30616180 30616230 -58888323 + MIR SINE MIR 93 145 -63 2019 137 10 3 chr17 30616247 30616553 -58888000 + AluSx SINE Alu 1 308 -4 2282 90 0 57 chr17 30616715 30617047 -58887506 + AluSq SINE Alu 1 313 0 357 254 62 15 chr17 30617050 30617180 -58887373 + MER103 DNA DNA 2 137 -29 2471 68 0 0 chr17 30618281 30618588 -58885965 - AluY SINE Alu -4 307 1 1026 188 140 0 chr17 30618670 30618877 -58885676 - AluJo SINE Alu -76 236 1 1877 135 38 3 chr17 30618926 30619214 -58885339 + AluSx SINE Alu 1 298 -14 2378 79 7 0 chr17 30619617 30619920 -58884633 - AluSp SINE Alu -8 305 1 1981 145 7 3 chr17 30619970 30620274 -58884279 - AluSx SINE Alu -7 305 1 2246 92 7 3 chr17 30620318 30620622 -58883931 - AluSq SINE Alu -8 305 1 1789 157 7 10 chr17 30620957 30621251 -58883302 + AluJb SINE Alu 11 303 -9 973 179 77 77 chr17 30622086 30622450 -58882103 + MLT1A1 LTR MaLR 3 428 -4 22 35 0 0 chr17 30622960 30622989 -58881564 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17 30623020 30623055 -58881498 + AT_rich Low_complexity Low_complexity 1 35 0 244 176 44 15 chr17 30623545 30623613 -58880940 - L1MD3 LINE L1 0 7995 7926 2207 133 0 0 chr17 30623614 30623916 -58880637 - AluJb SINE Alu -10 302 1 480 261 24 29 chr17 30623934 30624141 -58880412 - L1MC4 LINE L1 -150 7892 7687 314 247 35 0 chr17 30624166 30624251 -58880302 - L1M4 LINE L1 -2735 3411 3324 436 221 52 0 chr17 30624255 30624391 -58880162 - L1M4 LINE L1 -2959 3187 3045 1012 190 112 72 chr17 30624405 30624522 -58880031 - MER2 DNA MER2_type -2 343 232 2117 104 3 7 chr17 30624522 30624843 -58879710 - AluSp SINE Alu 0 320 1 1012 190 112 72 chr17 30624843 30625045 -58879508 - MER2 DNA MER2_type -113 232 10 1113 242 28 3 chr17 30625060 30625349 -58879204 - L1MC4 LINE L1 -509 7533 7238 1513 200 214 16 chr17 30625351 30625855 -58878698 - L1MC4 LINE L1 -958 7084 6481 2383 100 10 0 chr17 30625856 30626165 -58878388 - AluSx SINE Alu 0 312 1 2002 136 3 17 chr17 30626485 30626786 -58877767 - AluSx SINE Alu -15 297 1 1969 147 0 10 chr17 30626827 30627120 -58877433 - AluJo SINE Alu -14 298 9 1638 208 0 7 chr17 30627483 30627777 -58876776 - AluJo SINE Alu -20 292 1 26 74 0 0 chr17 30627847 30627901 -58876652 + AT_rich Low_complexity Low_complexity 1 54 0 2049 115 0 43 chr17 30628242 30628547 -58876006 + AluSx SINE Alu 16 307 -5 277 187 66 44 chr17 30628567 30628658 -58875895 - MER3 DNA MER1_type 0 209 117 1800 177 0 0 chr17 30629758 30630058 -58874495 + AluJb SINE Alu 5 304 -8 278 235 0 88 chr17 30630270 30630372 -58874181 + MER31A LTR ERV1 353 445 -40 26 30 0 0 chr17 30630375 30630408 -58874145 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr17 30630948 30630978 -58873575 + AT_rich Low_complexity Low_complexity 1 30 0 2180 95 0 3 chr17 30631131 30631455 -58873098 - AluSx SINE Alu 0 323 1 1448 164 36 75 chr17 30632300 30632605 -58871948 - AluJb SINE Alu -17 295 3 321 310 132 11 chr17 30632713 30632782 -58871771 + L1ME4a LINE L1 5687 5746 -375 2404 87 3 0 chr17 30632782 30633081 -58871472 + AluSg SINE Alu 1 300 -10 321 310 132 11 chr17 30633081 30633185 -58871368 + L1ME4a LINE L1 5746 5881 -240 1812 144 7 20 chr17 30633930 30634229 -58870324 + AluJb SINE Alu 5 299 -13 1792 108 8 4 chr17 30634257 30634508 -58870045 + AluSx SINE Alu 46 297 -15 1106 149 37 9 chr17 30634509 30634723 -58869830 - Charlie1 DNA MER1_type -808 1953 1734 2334 113 0 3 chr17 30634820 30635130 -58869423 - AluSx SINE Alu -3 309 1 1942 124 0 78 chr17 30636556 30636878 -58867675 - AluSx SINE Alu -15 297 1 406 351 24 6 chr17 30636944 30637109 -58867444 + MIR3 SINE MIR 36 203 -5 35 41 0 0 chr17 30638080 30638129 -58866424 + AT_rich Low_complexity Low_complexity 1 49 0 35 0 0 0 chr17 30638216 30638251 -58866302 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 30638353 30638381 -58866172 + AT_rich Low_complexity Low_complexity 1 28 0 851 216 138 16 chr17 30638490 30638573 -58865980 - MER2 DNA MER2_type -1 343 271 2258 109 0 13 chr17 30638573 30638885 -58865668 + AluY SINE Alu 1 308 -3 851 216 138 16 chr17 30638885 30639106 -58865447 - MER2 DNA MER2_type -73 271 2 538 228 94 8 chr17 30639149 30639276 -58865277 - MIR SINE MIR -20 242 105 1477 190 0 0 chr17 30640183 30640425 -58864128 - AluJb SINE Alu -35 277 36 22 35 0 0 chr17 30640449 30640478 -58864075 + AT_rich Low_complexity Low_complexity 1 29 0 2259 98 3 7 chr17 30640479 30640785 -58863768 + AluSc SINE Alu 1 305 -4 11344 128 50 81 chr17 30640798 30641683 -58862870 + Tigger1 DNA MER2_type 1 911 -1507 2060 125 3 28 chr17 30641683 30642002 -58862551 + AluSx SINE Alu 1 311 -1 11344 128 50 81 chr17 30642002 30642105 -58862448 + Tigger1 DNA MER2_type 911 1016 -1402 686 144 36 0 chr17 30642105 30642216 -58862337 - AluSg/x SINE Alu -12 298 184 11344 128 50 81 chr17 30642216 30642231 -58862322 + Tigger1 DNA MER2_type 1016 1030 -1388 829 143 0 30 chr17 30642231 30642364 -58862189 - FLAM_C SINE Alu -4 129 1 11344 128 50 81 chr17 30642364 30642842 -58861711 + Tigger1 DNA MER2_type 1030 1521 -897 2209 106 6 3 chr17 30642842 30643153 -58861400 + AluSp SINE Alu 1 312 -1 2269 101 3 3 chr17 30643162 30643459 -58861094 + AluSx SINE Alu 1 297 -15 11344 128 50 81 chr17 30643459 30644139 -58860414 + Tigger1 DNA MER2_type 1529 2213 -205 2413 75 7 3 chr17 30644139 30644446 -58860107 + AluSc SINE Alu 1 308 -1 11344 128 50 81 chr17 30644446 30644539 -58860014 + Tigger1 DNA MER2_type 2213 2307 -111 615 177 0 0 chr17 30644553 30644649 -58859904 - AluSg/x SINE Alu -25 285 190 1628 108 0 14 chr17 30644652 30644875 -58859678 - AluSq SINE Alu -93 220 1 676 171 8 0 chr17 30644875 30644992 -58859561 + Tigger1 DNA MER2_type 2300 2417 -1 252 119 0 0 chr17 30645179 30645221 -58859332 - L1MB7 LINE L1 -11 6173 6132 244 299 52 31 chr17 30645523 30645620 -58858933 + MER5A DNA MER1_type 40 138 -51 1961 143 82 12 chr17 30646008 30646408 -58858145 + L1MB3 LINE L1 5754 6181 -2 22 0 0 0 chr17 30646460 30646482 -58858071 + AT_rich Low_complexity Low_complexity 1 22 0 747 129 0 9 chr17 30646500 30646616 -58857937 - FLAM_C SINE Alu -17 116 2 2161 122 0 3 chr17 30646868 30647163 -58857390 + AluSx SINE Alu 1 294 -18 2274 102 3 10 chr17 30647280 30647594 -58856959 + AluSx SINE Alu 1 312 0 2062 130 0 11 chr17 30647605 30647928 -58856625 + AluSx SINE Alu 1 320 0 284 256 16 74 chr17 30647951 30648072 -58856481 + L1ME3A LINE L1 6019 6132 -38 2477 54 3 0 chr17 30648160 30648454 -58856099 + AluY SINE Alu 1 295 -16 505 283 137 57 chr17 30648784 30649288 -58855265 + L1M4 LINE L1 3249 3814 -2332 1997 133 25 0 chr17 30649288 30649574 -58854979 + AluSx SINE Alu 1 293 -19 505 283 137 57 chr17 30649574 30649769 -58854784 + L1M4 LINE L1 3814 3992 -2154 243 0 0 0 chr17 30649867 30649894 -58854659 + (A)n Simple_repeat Simple_repeat 1 27 0 180 273 0 0 chr17 30650201 30650245 -58854308 + MIR SINE MIR 217 260 -2 357 221 79 16 chr17 30650298 30650425 -58854128 + L1ME4a LINE L1 5957 6091 -30 523 270 67 29 chr17 30650635 30650712 -58853841 - MIR SINE MIR -39 223 150 2364 96 0 3 chr17 30650712 30651014 -58853539 - AluSq SINE Alu -12 301 1 523 270 67 29 chr17 30651014 30651150 -58853403 - MIR SINE MIR -112 150 8 1744 181 3 22 chr17 30651217 30651532 -58853021 - AluJb SINE Alu -3 309 1 1760 109 71 24 chr17 30652302 30652596 -58851957 - MER1B DNA MER1_type 0 339 32 315 131 20 30 chr17 30653183 30653282 -58851271 - MER63 DNA MER1_type -100 960 863 2116 109 0 0 chr17 30653305 30653580 -58850973 - AluSx SINE Alu -37 275 1 1909 153 0 13 chr17 30653584 30653891 -58850662 - AluJb SINE Alu -9 303 1 504 307 35 20 chr17 30704939 30705141 -58799412 + L2 LINE L2 3109 3313 0 2176 28 4 4 chr17 30705940 30706191 -58798362 + AluY SINE Alu 1 251 -60 338 246 61 104 chr17 30706384 30706513 -58798040 - L1ME4a LINE L1 -55 6066 5933 327 65 0 0 chr17 30706513 30706559 -58797994 + (TG)n Simple_repeat Simple_repeat 2 47 0 338 246 61 104 chr17 30706559 30706709 -58797844 - L1ME4a LINE L1 -188 5933 5799 2370 81 3 3 chr17 30707055 30707353 -58797200 - AluSp SINE Alu -13 300 3 1247 137 5 0 chr17 30707440 30707630 -58796923 - AluSg/x SINE Alu -5 305 115 193 316 53 13 chr17 30707700 30707776 -58796777 + L3b LINE CR1 1398 1476 -107 290 318 155 47 chr17 30708115 30708495 -58796058 + L2 LINE L2 485 905 -2409 2428 100 0 0 chr17 30708536 30708846 -58795707 - AluSx SINE Alu 0 312 3 2487 85 0 0 chr17 30708921 30709226 -58795327 - AluY SINE Alu -6 305 1 214 375 8 8 chr17 30709577 30709705 -58794848 + L2 LINE L2 1290 1417 -1897 2213 123 0 0 chr17 30711152 30711444 -58793109 - AluSx SINE Alu -20 292 1 721 268 96 13 chr17 30711544 30711783 -58792770 + MIR SINE MIR 4 262 0 288 0 0 0 chr17 30711785 30711817 -58792736 + (TC)n Simple_repeat Simple_repeat 2 33 0 279 0 0 0 chr17 30711816 30711847 -58792706 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 2329 99 0 6 chr17 30712221 30712533 -58792020 - AluSx SINE Alu -1 311 2 1985 118 17 24 chr17 30713655 30713952 -58790601 - AluSx SINE Alu -17 295 1 1112 154 80 5 chr17 30714142 30714343 -58790210 + AluSq SINE Alu 83 298 -15 2202 110 0 3 chr17 30714517 30714818 -58789735 + AluSc SINE Alu 1 300 -9 2267 79 10 26 chr17 30715854 30716158 -58788395 + AluSx SINE Alu 2 300 -12 1961 122 7 36 chr17 30716158 30716462 -58788091 + AluSx SINE Alu 1 295 -17 336 360 0 18 chr17 30716505 30716616 -58787937 + L2 LINE L2 3150 3258 -14 2373 93 3 3 chr17 30716678 30716989 -58787564 + AluSp SINE Alu 1 311 -2 2041 124 3 29 chr17 30718583 30718945 -58785608 - MER4A LTR ERV1 -2 662 252 227 74 0 0 chr17 30718951 30718978 -58785575 + MER4A LTR ERV1 148 174 -490 * 854 110 69 58 chr17 30718954 30719127 -58785426 - MER4A LTR ERV1 -489 175 1 2210 103 7 0 chr17 30719222 30719524 -58785029 + AluSx SINE Alu 1 304 0 359 258 11 21 chr17 30719557 30719650 -58784903 - MIR SINE MIR -82 126 35 2202 116 0 3 chr17 30719754 30720056 -58784497 + AluSg SINE Alu 1 301 -9 21 0 0 0 chr17 30721171 30721192 -58783361 + AT_rich Low_complexity Low_complexity 1 21 0 220 209 0 0 chr17 30721298 30721341 -58783212 - L2 LINE L2 -10 3303 3261 699 235 50 22 chr17 30721363 30721542 -58783011 + MER5A DNA MER1_type 6 189 0 1705 138 50 0 chr17 30721571 30721831 -58782722 - AluJb SINE Alu -35 277 5 23 33 0 0 chr17 30721881 30721911 -58782642 + AT_rich Low_complexity Low_complexity 1 30 0 2172 128 0 0 chr17 30721911 30722199 -58782354 - AluSx SINE Alu -24 288 1 27 49 0 0 chr17 30722280 30722321 -58782232 + AT_rich Low_complexity Low_complexity 1 41 0 238 313 60 66 chr17 30722351 30722533 -58782020 + L2 LINE L2 2577 2757 -557 1349 91 162 0 chr17 30722589 30722787 -58781766 - MER30 DNA MER1_type 0 230 1 237 242 15 15 chr17 30722829 30722895 -58781658 - Charlie8 DNA MER1_type -1930 487 422 2236 98 0 0 chr17 30722976 30723261 -58781292 + AluSg SINE Alu 1 285 -25 275 250 33 0 chr17 30723334 30723394 -58781159 - Charlie8 DNA MER1_type -2353 64 3 241 213 72 15 chr17 30723549 30723635 -58780918 - MIR SINE MIR -73 135 37 312 164 33 0 chr17 30724671 30724732 -58779821 - Alu SINE Alu 0 301 239 315 0 0 0 chr17 30724749 30724760 -58779793 + (CA)n Simple_repeat Simple_repeat 1 46 0 315 0 0 0 chr17 30724760 30724795 -58779758 + (CA)n Simple_repeat Simple_repeat 2 36 0 304 247 56 0 chr17 30724867 30724956 -58779597 + L1MC4 LINE L1 6614 6707 -1335 285 172 0 0 chr17 30724956 30725020 -58779533 + (TA)n Simple_repeat Simple_repeat 2 65 0 753 190 0 0 chr17 30725129 30725250 -58779303 - AluJb SINE Alu -190 122 2 2057 153 0 0 chr17 30725294 30725588 -58778965 + AluSx SINE Alu 1 294 -18 2047 119 0 3 chr17 30725595 30725903 -58778650 + AluSx SINE Alu 1 307 0 213 270 0 32 chr17 30725957 30726020 -58778533 - L2 LINE L2 -2 3311 3251 2051 117 13 3 chr17 30726469 30726769 -58777784 - AluSx SINE Alu -9 303 1 2253 101 0 13 chr17 30726804 30727102 -58777451 - AluSx SINE Alu -18 294 1 651 234 234 19 chr17 30727135 30727340 -58777213 + MIR SINE MIR 13 261 -1 1799 174 7 16 chr17 30727644 30727954 -58776599 + AluJo SINE Alu 3 309 -3 913 282 77 16 chr17 30728165 30728488 -58776065 + L2 LINE L2 2274 2616 -698 400 222 86 56 chr17 30728511 30728673 -58775880 - L1MC5 LINE L1 -37 7924 7758 464 294 64 38 chr17 30728687 30728922 -58775631 + L2 LINE L2 2619 2859 -455 635 186 132 0 chr17 30729467 30729596 -58774957 + FRAM SINE Alu 25 170 -6 3150 135 18 29 chr17 30729764 30730311 -58774242 + L1MB7 LINE L1 5635 6175 -9 1711 174 3 35 chr17 30730415 30730726 -58773827 - AluJb SINE Alu -9 303 3 1284 119 6 0 chr17 30732723 30732900 -58771653 - AluSg/x SINE Alu -14 296 119 231 265 67 114 chr17 30733027 30733370 -58771183 + L2 LINE L2 1791 2117 -1197 492 246 158 6 chr17 30733376 30733421 -58771132 + Charlie8 DNA MER1_type 41 78 -2339 1674 200 0 3 chr17 30733421 30733711 -58770842 - AluJb SINE Alu -23 289 1 492 246 158 6 chr17 30733711 30733836 -58770717 + Charlie8 DNA MER1_type 78 237 -2180 439 296 48 48 chr17 30733836 30734025 -58770528 - L2 LINE L2 -174 3139 2951 747 157 0 0 chr17 30734029 30734131 -58770422 + FLAM_A SINE Alu 1 102 -40 463 317 12 6 chr17 30734149 30734310 -58770243 - L2 LINE L2 -353 2961 2800 541 299 147 34 chr17 30734376 30734654 -58769899 + L2 LINE L2 1913 2241 -1073 2784 207 62 8 chr17 30734654 30734809 -58769744 - MLT1F LTR MaLR -2 540 395 1751 97 0 0 chr17 30734809 30735035 -58769518 + AluY SINE Alu 83 308 -3 2784 207 62 8 chr17 30735035 30735391 -58769162 - MLT1F LTR MaLR -147 395 1 541 299 147 34 chr17 30735391 30735467 -58769086 + L2 LINE L2 2241 2307 -1007 1183 124 0 17 chr17 30735642 30735819 -58768734 + AluSg/x SINE Alu 137 310 -2 462 274 122 46 chr17 30735834 30736031 -58768522 - MIR SINE MIR -5 257 46 2298 114 0 7 chr17 30736031 30736338 -58768215 - AluSq SINE Alu -8 305 1 203 133 0 0 chr17 30737029 30737059 -58767494 + (GGA)n Simple_repeat Simple_repeat 1 30 0 2329 88 3 3 chr17 30738278 30738575 -58765978 + AluSg1 SINE Alu 1 297 -12 2301 98 0 3 chr17 30740530 30740836 -58763717 + AluSx SINE Alu 1 305 -7 4565 44 2 18 chr17 30740843 30741391 -58763162 + L1PA8 LINE L1 5628 6166 -6 220 224 276 40 chr17 30741416 30741568 -58762985 - L2 LINE L2 -121 3192 3005 317 273 142 79 chr17 30741659 30742047 -58762506 - L2 LINE L2 -261 3011 2564 1202 138 15 10 chr17 30743169 30743365 -58761188 + L1MA3 LINE L1 4016 4212 -1934 1016 128 0 0 chr17 30743365 30743513 -58761040 + AluSq/x SINE Alu 1 148 -165 511 169 0 0 chr17 30743513 30743590 -58760963 - AluY SINE Alu -237 81 5 6972 128 14 31 chr17 30743591 30745503 -58759050 + L1MA3 LINE L1 4209 6153 -152 1598 164 36 11 chr17 30745503 30745777 -58758776 + AluJb SINE Alu 1 281 -31 6972 128 14 31 chr17 30745777 30745899 -58758654 + L1MA3 LINE L1 6153 6212 -93 2040 154 0 10 chr17 30745899 30746205 -58758348 - AluJb SINE Alu -9 303 1 6972 128 14 31 chr17 30746205 30746293 -58758260 + L1MA3 LINE L1 6212 6300 -5 22 56 0 0 chr17 30746294 30746330 -58758223 + AT_rich Low_complexity Low_complexity 1 36 0 210 343 171 0 chr17 30746631 30746736 -58757817 + MIR3 SINE MIR 11 133 -75 2024 103 0 0 chr17 30746878 30747199 -58757354 - AluSx SINE Alu 0 343 23 271 253 55 21 chr17 30747563 30747660 -58756893 + MIR SINE MIR 65 164 -67 2173 107 0 38 chr17 30749368 30749686 -58754867 - AluSg SINE Alu -4 306 1 2224 113 3 3 chr17 30750880 30751181 -58753372 + AluSx SINE Alu 1 301 -11 1984 125 7 0 chr17 30751300 30751581 -58752972 + AluSx SINE Alu 21 303 -9 2435 87 0 7 chr17 30751971 30752281 -58752272 + AluSc SINE Alu 1 308 -1 2628 62 0 0 chr17 30752283 30752590 -58751963 + AluY SINE Alu 1 307 -4 431 241 245 14 chr17 30752756 30752972 -58751581 + L2 LINE L2 3044 3309 -4 261 302 170 19 chr17 30753024 30753130 -58751423 + MIR SINE MIR 23 144 -64 216 0 0 0 chr17 30753386 30753410 -58751143 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 4824 44 7 0 chr17 30753410 30753958 -58750595 - L1PA5 LINE L1 -13 6141 5590 194 262 0 0 chr17 30753958 30754000 -58750553 + MIR SINE MIR 89 130 -78 2484 74 0 3 chr17 30754009 30754319 -58750234 - AluY SINE Alu -2 309 1 242 284 0 25 chr17 30754319 30754400 -58750153 + MIR SINE MIR 112 190 -72 547 222 139 0 chr17 30754741 30754885 -58749668 + MER45A DNA AcHobo 15 178 0 22 35 0 0 chr17 30756645 30756674 -58747879 + AT_rich Low_complexity Low_complexity 1 29 0 695 280 83 36 chr17 30756684 30757060 -58747493 + L1ME4a LINE L1 5514 5907 -214 1984 122 10 7 chr17 30757076 30757379 -58747174 - AluSq SINE Alu -9 304 1 2113 127 10 3 chr17 30757389 30757696 -58746857 - AluY SINE Alu 0 311 3 180 97 0 0 chr17 30757726 30757757 -58746796 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1680 179 0 47 chr17 30757778 30758096 -58746457 - AluJo SINE Alu -7 305 3 2214 98 3 3 chr17 30758104 30758399 -58746154 - AluSx SINE Alu -17 295 1 1716 153 62 0 chr17 30758399 30758673 -58745880 - AluSx SINE Alu -15 297 7 282 116 0 0 chr17 30759353 30759396 -58745157 + (T)n Simple_repeat Simple_repeat 1 43 0 331 256 97 84 chr17 30759598 30759836 -58744717 - L1M2 LINE L1 -5899 950 710 378 0 0 0 chr17 30760325 30760367 -58744186 + (TG)n Simple_repeat Simple_repeat 2 43 0 2392 103 0 0 chr17 30760612 30760924 -58743629 - AluSx SINE Alu 0 312 1 308 309 21 0 chr17 30761264 30761358 -58743195 - MIR SINE MIR -108 154 59 2316 112 0 6 chr17 30761728 30762042 -58742511 + AluSx SINE Alu 1 312 0 521 278 170 10 chr17 30764242 30764630 -58739923 + L1M4 LINE L1 3590 4039 -2107 3120 109 18 13 chr17 30764727 30765185 -58739368 - Tigger3b DNA MER2_type 0 1231 772 1096 162 0 0 chr17 30765190 30765357 -58739196 - AluSc SINE Alu -10 299 133 1047 99 0 0 chr17 30765402 30765533 -58739020 + AluSc SINE Alu 1 131 -178 3247 139 58 23 chr17 30765547 30765802 -58738751 - Tigger3b DNA MER2_type -2454 574 329 2244 113 3 3 chr17 30765802 30766112 -58738441 + AluSp SINE Alu 1 310 -3 3247 139 58 23 chr17 30766112 30766411 -58738142 - Tigger3b DNA MER2_type -2699 329 1 501 319 54 42 chr17 30766418 30767217 -58737336 + L1M4 LINE L1 4188 5015 -1131 332 235 98 59 chr17 30767434 30767587 -58736966 + L1M LINE L1 5265 5423 -2385 664 246 181 0 chr17 30767593 30767792 -58736761 + MIR SINE MIR 14 248 -14 2070 111 3 14 chr17 30767804 30768101 -58736452 - AluSx SINE Alu -18 294 1 2148 83 35 7 chr17 30768185 30768474 -58736079 + AluSg SINE Alu 1 297 -13 21 0 0 0 chr17 30768810 30768831 -58735722 + AT_rich Low_complexity Low_complexity 1 21 0 1837 165 26 0 chr17 30768942 30769245 -58735308 - AluJb SINE Alu -1 311 1 2454 78 0 0 chr17 30769938 30770247 -58734306 - AluY SINE Alu -2 309 1 21 0 0 0 chr17 30770588 30770609 -58733944 + AT_rich Low_complexity Low_complexity 1 21 0 1166 222 35 14 chr17 30770902 30771190 -58733363 + AluJb SINE Alu 1 294 -8 795 238 6 6 chr17 30771193 30771379 -58733174 + AluJo/FRAM SINE Alu 137 302 0 606 274 142 0 chr17 30771568 30771787 -58732766 + MIR SINE MIR 11 260 -2 243 346 112 0 chr17 30771862 30771969 -58732584 - MIR SINE MIR -90 172 54 32 0 0 0 chr17 30772027 30772059 -58732494 + AT_rich Low_complexity Low_complexity 1 32 0 1651 181 22 4 chr17 30772059 30772336 -58732217 - AluJo SINE Alu -30 282 1 1763 151 51 10 chr17 30772336 30772628 -58731925 - AluJo SINE Alu -8 304 1 347 102 0 0 chr17 30772654 30772703 -58731850 + MADE1 DNA Mariner 1 49 -31 2507 140 30 14 chr17 30772707 30773136 -58731417 - L1MB3 LINE L1 -18 6165 5730 21 57 0 0 chr17 30774646 30774681 -58729872 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 30774799 30774821 -58729732 + GC_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 30775133 30775171 -58729382 + (TG)n Simple_repeat Simple_repeat 2 39 0 2234 91 0 3 chr17 30775178 30775474 -58729079 - AluSq SINE Alu -17 296 2 843 196 55 6 chr17 30775600 30775763 -58728790 + MER5B DNA MER1_type 1 171 -7 2279 109 0 3 chr17 30777241 30777544 -58727009 - AluSq SINE Alu -11 302 1 195 333 46 23 chr17 30778308 30778395 -58726158 + MIR SINE MIR 23 111 -97 383 304 245 0 chr17 30778544 30778728 -58725825 + MIR SINE MIR 2 230 -32 180 270 124 22 chr17 30778922 30779011 -58725542 + MIR SINE MIR 77 174 -88 2336 109 0 0 chr17 30779031 30779333 -58725220 + AluSx SINE Alu 1 302 -10 1608 126 146 0 chr17 30779507 30779761 -58724792 + AluJo SINE Alu 3 293 -9 24 32 0 0 chr17 30779761 30779792 -58724761 + AT_rich Low_complexity Low_complexity 1 31 0 183 80 0 0 chr17 30780657 30780682 -58723871 + (T)n Simple_repeat Simple_repeat 1 25 0 490 265 92 97 chr17 30780721 30780905 -58723648 - L1MC4a LINE L1 0 6121 5938 294 95 0 0 chr17 30780905 30780947 -58723606 + (CA)n Simple_repeat Simple_repeat 1 42 0 490 265 92 97 chr17 30780947 30781329 -58723224 - L1MC4a LINE L1 -183 5938 5558 1703 170 75 0 chr17 30781585 30781867 -58722686 - AluJo SINE Alu -9 303 1 957 140 0 0 chr17 30782228 30782371 -58722182 + FLAM_C SINE Alu 1 143 0 487 216 239 6 chr17 30782376 30782543 -58722010 - MIR SINE MIR -56 206 1 2036 129 6 28 chr17 30783388 30783706 -58720847 - AluSx SINE Alu -1 311 1 2260 115 0 0 chr17 30783774 30784070 -58720483 - AluSx SINE Alu -16 296 1 542 228 56 71 chr17 30784199 30784396 -58720157 - MIR SINE MIR -47 215 22 201 310 0 0 chr17 30784626 30784684 -58719869 + L2 LINE L2 3254 3311 -2 261 235 0 44 chr17 30785435 30785503 -58719050 - MIR SINE MIR -80 182 118 226 246 215 92 chr17 30785474 30785543 -58719010 - MIR3 SINE MIR -62 146 87 * 1843 52 0 0 chr17 30785543 30785753 -58718800 - AluY SINE Alu -13 298 89 226 246 215 92 chr17 30785753 30785793 -58718760 - MIR3 SINE MIR -121 87 53 2622 183 63 58 chr17 30785793 30786309 -58718244 + MLT2B3 LTR ERVL 1 522 -32 702 48 29 0 chr17 30786309 30786412 -58718141 + (TCCA)n Simple_repeat Simple_repeat 2 107 0 2622 183 63 58 chr17 30786412 30786446 -58718107 + MLT2B3 LTR ERVL 522 554 0 226 246 215 92 chr17 30786446 30786465 -58718088 - MIR3 SINE MIR -155 53 1 25 90 0 0 chr17 30786639 30786706 -58717847 + AT_rich Low_complexity Low_complexity 1 67 0 2243 105 27 0 chr17 30786970 30787266 -58717287 - AluSp SINE Alu -9 304 1 2263 102 3 3 chr17 30787567 30787861 -58716692 - AluSq SINE Alu -19 294 1 794 165 0 0 chr17 30788577 30788710 -58715843 - AluJb SINE Alu -4 308 176 2277 101 0 26 chr17 30790226 30790532 -58714021 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 30791090 30791114 -58713439 + (A)n Simple_repeat Simple_repeat 1 24 0 2171 90 0 4 chr17 30791660 30791937 -58712616 + AluSx SINE Alu 5 280 -32 362 20 40 0 chr17 30791937 30791987 -58712566 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1218 141 0 0 chr17 30791988 30792165 -58712388 + AluSg/x SINE Alu 135 311 -1 247 48 24 24 chr17 30792401 30792443 -58712110 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 1725 106 120 25 chr17 30792857 30793140 -58711413 + AluSg SINE Alu 1 310 0 1799 108 25 0 chr17 30793240 30793480 -58711073 + AluSx SINE Alu 1 246 -66 638 110 0 10 chr17 30793580 30793680 -58710873 - L1 LINE L1 -1839 4307 4209 519 156 0 0 chr17 30793681 30793758 -58710795 + AluY SINE Alu 5 81 -237 1182 54 7 7 chr17 30793758 30793905 -58710648 - AluY SINE Alu -164 147 1 2308 126 0 0 chr17 30794264 30794573 -58709980 - AluSg SINE Alu -1 309 1 249 138 0 46 chr17 30794579 30794644 -58709909 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 2105 108 10 20 chr17 30794645 30794940 -58709613 - AluSx SINE Alu -20 292 1 230 266 255 0 chr17 30795097 30795191 -58709362 - L2 LINE L2 -5 3267 3150 209 308 46 0 chr17 30795202 30795267 -58709286 + L2 LINE L2 2603 2670 -644 411 156 31 0 chr17 30795316 30795380 -58709173 - LTR8 LTR ERV1 -102 589 524 2418 80 0 0 chr17 30795381 30795681 -58708872 - AluSx SINE Alu -12 300 1 1023 104 0 0 chr17 30795681 30795816 -58708737 - AluSq/x SINE Alu -177 135 1 711 176 75 60 chr17 30795817 30796014 -58708539 - LTR8 LTR ERV1 -150 577 362 265 92 66 0 chr17 30796047 30796123 -58708430 + (TA)n Simple_repeat Simple_repeat 1 81 0 2577 85 67 26 chr17 30796123 30796511 -58708042 - MLT2A1 LTR ERVL -40 404 1 482 127 14 0 chr17 30796511 30796581 -58707972 - LTR8A LTR ERV1 -345 382 312 2945 0 0 0 chr17 30796582 30796893 -58707660 + AluYa5 SINE Alu 1 311 0 2128 120 7 0 chr17 30796906 30797197 -58707356 + AluSx SINE Alu 1 293 -19 1317 97 0 11 chr17 30797240 30797415 -58707138 + AluSg/x SINE Alu 124 296 -14 307 182 18 0 chr17 30797415 30797470 -58707083 - LTR8A LTR ERV1 -407 320 265 213 333 85 16 chr17 30797826 30797955 -58706598 + L3b LINE CR1 1247 1384 -199 2170 121 0 10 chr17 30798291 30798597 -58705956 - AluSg SINE Alu -7 303 1 2464 60 0 0 chr17 30798604 30798905 -58705648 - AluY SINE Alu -10 301 1 1882 164 68 6 chr17 30799043 30799366 -58705187 + MER61A LTR ERV1 1 343 0 1355 148 121 12 chr17 30799471 30799727 -58704826 + AluJo SINE Alu 1 284 -28 5135 123 44 21 chr17 30799770 30800533 -58704020 - L1MB3 LINE L1 -1 6182 5395 1747 168 14 10 chr17 30800533 30800830 -58703723 - AluJo SINE Alu -14 298 1 5135 123 44 21 chr17 30800830 30800921 -58703632 - L1MB3 LINE L1 -788 5395 5308 1935 190 80 35 chr17 30800922 30801388 -58703165 + MLT2B1 LTR ERVL 1 534 -20 384 103 0 0 chr17 30801402 30801460 -58703093 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 315 122 0 189 chr17 30801461 30801535 -58703018 + MLT2D LTR ERVL 357 414 0 3075 195 30 8 chr17 30801564 30802224 -58702329 + MLT-int LTR MaLR 58 742 -629 284 196 18 116 chr17 30802263 30802375 -58702178 + MLT-int LTR MaLR 657 757 -978 1925 250 34 16 chr17 30802467 30802949 -58701604 + MLT1A2-int LTR MaLR 1203 1735 0 1437 210 72 35 chr17 30802949 30803297 -58701256 + MLT1A2 LTR MaLR 1 361 -13 672 163 79 63 chr17 30803302 30803492 -58701061 - L1 LINE L1 -843 5303 5111 2350 97 3 0 chr17 30803531 30803829 -58700724 - AluSx SINE Alu -13 299 1 2046 115 3 3 chr17 30803878 30804186 -58700367 - AluSx SINE Alu 0 309 2 1848 126 77 14 chr17 30804719 30805005 -58699548 - AluSg SINE Alu -6 304 1 2500 62 7 0 chr17 30805467 30805776 -58698777 - AluY SINE Alu 0 311 1 354 217 245 57 chr17 30806437 30806543 -58698010 - FLAM_A SINE Alu -6 127 2 281 287 26 35 chr17 30807196 30807311 -58697242 - MIR SINE MIR -1 261 148 375 254 9 26 chr17 30807404 30807518 -58697035 + HsTC2 DNA Tc2 1781 1892 -6 227 227 61 30 chr17 30807968 30808034 -58696519 - Alu SINE Alu -123 179 136 2109 128 0 3 chr17 30808540 30808845 -58695708 - AluSq SINE Alu -9 304 1 21 0 0 0 chr17 30809056 30809077 -58695476 + AT_rich Low_complexity Low_complexity 1 21 0 2216 97 3 3 chr17 30809153 30809443 -58695110 - AluSx SINE Alu -22 290 1 1836 162 0 46 chr17 30809599 30809926 -58694627 - AluJo SINE Alu 0 312 1 1825 206 65 118 chr17 30809933 30810418 -58694135 - L1ME2 LINE L1 0 6164 5724 1616 160 41 8 chr17 30810418 30810686 -58693867 + AluJo SINE Alu 1 277 -35 1825 206 65 118 chr17 30810686 30810878 -58693675 - L1ME2 LINE L1 -440 5724 5523 2035 106 64 0 chr17 30810977 30811260 -58693293 - AluSg SINE Alu -9 301 1 233 246 33 0 chr17 30811427 30811488 -58693065 - MIR SINE MIR -94 168 106 596 237 90 20 chr17 30811504 30811749 -58692804 - L1MDa LINE L1 -3913 2627 2366 1489 262 70 10 chr17 30811843 30812364 -58692189 - L1ME3 LINE L1 -304 5858 5367 180 225 225 0 chr17 30812640 30812680 -58691873 - MIR SINE MIR -162 100 52 240 189 0 0 chr17 30813421 30813495 -58691058 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 2351 107 3 0 chr17 30813658 30813968 -58690585 - AluSx SINE Alu -1 311 1 347 333 88 78 chr17 30814200 30814600 -58689953 + L2 LINE L2 2867 3270 -2 890 160 8 0 chr17 30814840 30814965 -58689588 - FLAM_C SINE Alu -7 126 1 232 25 75 0 chr17 30814984 30815024 -58689529 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 230 341 124 8 chr17 30815024 30815153 -58689400 - L2 LINE L2 -26 3287 3144 850 174 8 0 chr17 30815304 30815436 -58689117 + FLAM_C SINE Alu 1 133 0 1570 225 132 76 chr17 30815954 30816469 -58688084 - MLT1H1 LTR MaLR 0 555 12 1547 187 3 71 chr17 30817471 30817797 -58686756 - AluJo SINE Alu -8 304 1 2199 81 3 3 chr17 30817941 30818258 -58686295 - AluY SINE Alu 0 317 1 222 315 27 14 chr17 30818476 30818549 -58686004 - MER5B DNA MER1_type -104 74 1 230 289 340 0 chr17 30818683 30818780 -58685773 + L2 LINE L2 3143 3272 0 220 340 32 21 chr17 30818764 30818858 -58685695 - MIR SINE MIR -148 114 20 * 291 298 46 40 chr17 30819016 30819167 -58685386 - MIR SINE MIR -55 207 56 216 0 0 0 chr17 30820637 30820661 -58683892 + (T)n Simple_repeat Simple_repeat 1 24 0 2470 76 0 0 chr17 30820930 30821234 -58683319 - AluSq SINE Alu -9 304 1 2039 145 0 0 chr17 30821782 30822072 -58682481 + AluSx SINE Alu 5 294 -18 368 298 75 126 chr17 30822257 30822379 -58682174 + L2 LINE L2 2890 3017 -255 1548 179 18 25 chr17 30822379 30822659 -58681894 - AluJo SINE Alu -29 283 6 368 298 75 126 chr17 30822659 30822885 -58681668 + L2 LINE L2 3017 3220 -52 825 101 201 0 chr17 30823653 30823802 -58680751 - MER30 DNA MER1_type 0 230 52 2135 141 0 0 chr17 30823802 30824106 -58680447 - AluSx SINE Alu -8 304 1 34 24 0 0 chr17 30824231 30824272 -58680281 + AT_rich Low_complexity Low_complexity 1 41 0 1734 178 18 0 chr17 30824382 30824663 -58679890 - AluJo SINE Alu -14 298 13 30 45 0 0 chr17 30824755 30824799 -58679754 + AT_rich Low_complexity Low_complexity 1 44 0 193 333 53 0 chr17 30824891 30824966 -58679587 + L2 LINE L2 3142 3220 -52 498 116 32 0 chr17 30824984 30825079 -58679474 - L1MB8 LINE L1 0 6178 6081 1704 206 0 3 chr17 30825103 30825395 -58679158 - AluJb SINE Alu -21 291 1 2281 67 3 0 chr17 30825420 30825725 -58678828 + AluY SINE Alu 1 306 0 332 241 94 33 chr17 30825745 30825912 -58678641 + L1 LINE L1 5150 5338 -824 2075 95 25 7 chr17 30825912 30826195 -58678358 + AluSx SINE Alu 1 288 -24 332 241 94 33 chr17 30826195 30826261 -58678292 + L1 LINE L1 5338 5399 -763 21 36 0 0 chr17 30826264 30826292 -58678261 + AT_rich Low_complexity Low_complexity 1 28 0 2471 58 0 0 chr17 30826347 30826640 -58677913 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr17 30826640 30826661 -58677892 + AT_rich Low_complexity Low_complexity 1 21 0 2389 66 7 7 chr17 30826661 30826965 -58677588 + AluY SINE Alu 1 304 -7 2518 62 7 0 chr17 30826965 30827272 -58677281 + AluY SINE Alu 1 309 -2 230 267 58 8 chr17 30827411 30827531 -58677022 + L1ME LINE L1 5690 5815 -306 22 0 0 0 chr17 30827547 30827569 -58676984 + AT_rich Low_complexity Low_complexity 1 22 0 2146 124 0 19 chr17 30827752 30827926 -58676627 - AluSq SINE Alu -5 308 141 2298 104 3 0 chr17 30827926 30828233 -58676320 - AluSc SINE Alu -1 308 1 2146 124 0 19 chr17 30828233 30828372 -58676181 - AluSq SINE Alu -172 141 1 2100 129 0 26 chr17 30828649 30828960 -58675593 - AluSx SINE Alu -9 303 1 2166 117 20 0 chr17 30830042 30830341 -58674212 - AluSx SINE Alu -7 305 1 2295 108 23 0 chr17 30830445 30830750 -58673803 - AluSx SINE Alu 0 312 1 671 163 36 68 chr17 30830751 30830945 -58673608 - LTR8 LTR ERV1 -150 577 385 265 92 66 0 chr17 30830981 30831057 -58673496 + (TA)n Simple_repeat Simple_repeat 2 82 0 833 119 60 32 chr17 30831057 30831242 -58673311 - MLT2A1 LTR ERVL -40 404 215 1567 68 5 0 chr17 30831358 30831550 -58673003 + AluY SINE Alu 105 297 -14 1900 159 0 10 chr17 30832394 30832706 -58671847 - AluJo SINE Alu 0 309 1 1917 138 20 7 chr17 30833132 30833428 -58671125 + AluJb SINE Alu 1 300 -12 6369 82 11 4 chr17 30833720 30835026 -58669527 - L1PA11 LINE L1 -1 6173 4844 2972 162 164 41 chr17 30835026 30835870 -58668683 - MER52C LTR ERV1 -1 1277 16 1508 181 7 0 chr17 30835895 30836198 -58668355 - L1P LINE L1 -1297 4849 4545 2486 94 0 9 chr17 30836358 30836849 -58667704 - L1M1 LINE L1 -707 5598 5111 5863 113 13 5 chr17 30836859 30838064 -58666489 + L1MA2 LINE L1 4872 6092 -212 1776 164 21 7 chr17 30838064 30838345 -58666208 + AluJo SINE Alu 1 285 -27 5863 113 13 5 chr17 30838345 30838403 -58666150 + L1MA2 LINE L1 6092 6148 -156 2169 110 4 0 chr17 30838403 30838684 -58665869 + AluSp SINE Alu 1 282 -31 403 270 52 17 chr17 30838696 30838811 -58665742 + L2 LINE L2 3195 3313 0 1096 106 0 12 chr17 30839642 30839802 -58664751 - L1MC1 LINE L1 0 6333 6176 214 245 19 0 chr17 30840304 30840357 -58664196 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 195 250 23 0 chr17 30840367 30840411 -58664142 - L2 LINE L2 -11 3261 3217 1277 155 14 83 chr17 30840421 30840698 -58663855 - AluJo SINE Alu -54 258 1 218 140 0 20 chr17 30841694 30841744 -58662809 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 2279 119 0 0 chr17 30841754 30842057 -58662496 - AluSg SINE Alu -7 303 1 189 0 0 0 chr17 30842192 30842213 -58662340 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 347 282 19 0 chr17 30842430 30842533 -58662020 + L1ME LINE L1 5529 5633 -488 2243 108 0 7 chr17 30842727 30843034 -58661519 + AluSg SINE Alu 1 305 -5 845 151 0 0 chr17 30843095 30843221 -58661332 - FLAM_C SINE Alu -7 126 1 495 176 20 20 chr17 30843263 30843365 -58661188 + U13 snRNA snRNA 1 102 -2 192 158 0 0 chr17 30843369 30843407 -58661146 + A-rich Low_complexity Low_complexity 1 38 0 286 277 86 72 chr17 30843954 30844232 -58660321 + L2 LINE L2 1527 1808 -1506 752 108 0 0 chr17 30844269 30844371 -58660182 - AluJ/FLAM SINE Alu -210 102 1 771 343 119 29 chr17 30844394 30845157 -58659396 + L2 LINE L2 1825 2656 -658 187 328 0 0 chr17 30845246 30845304 -58659249 + MER5A DNA MER1_type 127 184 -5 207 0 0 0 chr17 30845606 30845629 -58658924 + (A)n Simple_repeat Simple_repeat 1 23 0 1136 195 53 38 chr17 30845632 30845889 -58658664 + MER21B LTR ERV1 25 286 -573 2725 80 11 3 chr17 30845889 30846250 -58658303 + THE1B LTR MaLR 1 364 0 2893 72 83 114 chr17 30846257 30846722 -58657831 + THE1B-int LTR MaLR 8 453 -1127 2343 113 0 0 chr17 30846722 30847023 -58657530 + AluSx SINE Alu 1 301 -11 2893 72 83 114 chr17 30847023 30847138 -58657415 + THE1B-int LTR MaLR 453 570 -1010 275 333 114 0 chr17 30847200 30847323 -58657230 - MIR3 SINE MIR -10 198 62 725 212 212 5 chr17 30847741 30847944 -58656609 + MIR SINE MIR 18 262 0 1900 169 0 3 chr17 30848212 30848496 -58656057 + AluJb SINE Alu 1 283 -29 1641 157 39 30 chr17 30848910 30849215 -58655338 + AluJb SINE Alu 1 308 -4 1581 173 54 38 chr17 30849291 30849424 -58655129 + L1MB8 LINE L1 4896 5025 -1121 2165 125 10 0 chr17 30849424 30849728 -58654825 + AluSx SINE Alu 3 309 -3 1581 173 54 38 chr17 30849728 30850021 -58654532 + L1MB8 LINE L1 5025 5329 -817 800 182 94 69 chr17 30850021 30850224 -58654329 + AluJo SINE Alu 82 289 -23 3534 171 77 10 chr17 30850242 30851043 -58653510 + L1MB8 LINE L1 5316 6173 -5 2182 82 0 0 chr17 30851043 30851311 -58653242 - AluSc SINE Alu -41 268 1 364 339 65 12 chr17 30851456 30851624 -58652929 - MER5A DNA MER1_type 0 189 13 594 120 10 0 chr17 30851702 30851802 -58652751 - MER51A LTR ERV1 -65 569 469 659 184 0 57 chr17 30852321 30852462 -58652091 - FLAM_A SINE Alu 0 133 1 294 176 118 0 chr17 30852811 30852879 -58651674 + HY5 scRNA scRNA 1 76 -8 28 29 0 0 chr17 30852879 30852914 -58651639 + AT_rich Low_complexity Low_complexity 1 35 0 577 336 69 30 chr17 30852970 30853508 -58651045 + L2 LINE L2 1498 2056 -1258 1599 183 38 44 chr17 30853572 30853939 -58650614 + MLT1A1 LTR MaLR 1 365 0 422 233 80 7 chr17 30853945 30854095 -58650458 + MER103 DNA DNA 6 166 0 341 243 322 20 chr17 30854372 30854524 -58650029 + MIR SINE MIR 65 262 0 188 377 88 31 chr17 30854525 30854608 -58649945 + L2 LINE L2 2239 2316 -998 1340 208 81 19 chr17 30854608 30854930 -58649623 + MER2 DNA MER2_type 2 343 -1 188 377 88 31 chr17 30854930 30855074 -58649479 + L2 LINE L2 2316 2479 -835 189 333 128 43 chr17 30855171 30855312 -58649241 + L2 LINE L2 2731 2883 -431 326 129 71 23 chr17 30855432 30856033 -58648520 + (TA)n Simple_repeat Simple_repeat 1 629 0 202 222 57 34 chr17 30856074 30856591 -58647962 + (TA)n Simple_repeat Simple_repeat 1 528 0 225 204 62 31 chr17 30856632 30856794 -58647759 + (TA)n Simple_repeat Simple_repeat 1 167 0 414 147 0 0 chr17 30856807 30856875 -58647678 - MER2 DNA MER2_type -228 117 50 37 29 0 43 chr17 30856875 30856945 -58647608 + AT_rich Low_complexity Low_complexity 1 67 0 203 302 174 0 chr17 30857220 30857306 -58647247 - L2 LINE L2 -5 3308 3208 200 227 0 0 chr17 30857345 30857389 -58647164 + (TA)n Simple_repeat Simple_repeat 1 44 0 26814 31 3 1 chr17 30857460 30861642 -58642911 + L1PA4 LINE L1 1967 6155 0 579 188 0 0 chr17 30862028 30862145 -58642408 + CT-rich Low_complexity Low_complexity 3 119 0 1628 174 7 24 chr17 30862150 30862437 -58642116 - AluJo SINE Alu -30 282 1 1982 135 7 0 chr17 30863256 30863537 -58641016 + AluSq SINE Alu 3 285 -28 269 159 16 0 chr17 30863544 30863607 -58640946 + (TA)n Simple_repeat Simple_repeat 2 65 0 40 21 0 0 chr17 30863607 30863654 -58640899 + AT_rich Low_complexity Low_complexity 1 47 0 277 278 112 29 chr17 30863654 30863859 -58640694 + MARNA DNA Mariner 27 248 -338 528 256 105 12 chr17 30864099 30864271 -58640282 + MARNA DNA Mariner 286 473 -113 6143 129 5 2 chr17 30864273 30865267 -58639286 + L1P LINE L1 3412 4408 -1738 1063 156 103 73 chr17 30865546 30865678 -58638875 + MER2 DNA MER2_type 2 129 -216 1598 191 38 3 chr17 30865678 30865846 -58638707 - AluJo SINE Alu -11 301 117 195 42 0 0 chr17 30865846 30865870 -58638683 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1598 191 38 3 chr17 30865870 30865989 -58638564 - AluJo SINE Alu -195 117 4 1063 156 103 73 chr17 30865989 30866157 -58638396 + MER2 DNA MER2_type 129 311 -34 2333 98 0 7 chr17 30866165 30866470 -58638083 - AluY SINE Alu -8 303 1 456 123 284 0 chr17 30866755 30866836 -58637717 + FLAM_C SINE Alu 28 131 -12 1970 82 4 0 chr17 30866867 30867112 -58637441 + AluSp SINE Alu 1 246 -67 24 67 0 0 chr17 30867872 30867917 -58636636 + AT_rich Low_complexity Low_complexity 1 45 0 294 279 271 8 chr17 30868310 30868432 -58636121 - L2 LINE L2 -1 3312 3159 225 94 0 0 chr17 30869168 30869200 -58635353 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 895 128 60 0 chr17 30869205 30869338 -58635215 - FRAM SINE Alu -36 140 1 2155 84 3 7 chr17 30869570 30869855 -58634698 - AluSc SINE Alu -15 294 11 1978 158 0 0 chr17 30870285 30870583 -58633970 - AluJo SINE Alu -14 298 1 227 246 66 0 chr17 30871240 30871301 -58633252 - L1MC4 LINE L1 -13 8029 7965 2241 116 7 3 chr17 30871519 30871822 -58632731 + AluSx SINE Alu 1 304 -8 209 194 0 0 chr17 30871957 30871993 -58632560 - L2 LINE L2 -23 3290 3255 1213 231 126 58 chr17 30872098 30872648 -58631905 - MLT1L LTR MaLR -28 587 1 261 260 117 0 chr17 30872703 30872780 -58631773 + MLT1K LTR MaLR 3 88 -500 836 283 81 29 chr17 30872792 30873100 -58631453 + MLT1K LTR MaLR 265 588 0 21 0 0 0 chr17 30873892 30873913 -58630640 + AT_rich Low_complexity Low_complexity 1 21 0 758 262 191 25 chr17 30874014 30874331 -58630222 - MLT1I LTR MaLR -1 449 28 579 253 111 97 chr17 30874477 30874848 -58629705 - MLT1K LTR MaLR -144 444 69 232 289 105 0 chr17 30875232 30875308 -58629245 - MIR SINE MIR -142 120 37 265 281 146 0 chr17 30875346 30875428 -58629125 + L2 LINE L2 3189 3282 -31 578 253 24 41 chr17 30877084 30877254 -58627299 - MIR SINE MIR -14 248 82 192 40 0 0 chr17 30877386 30877411 -58627142 + (TG)n Simple_repeat Simple_repeat 2 26 0 333 260 13 0 chr17 30877558 30877635 -58626918 - L2 LINE L2 0 3272 3195 618 334 73 69 chr17 30877645 30877759 -58626794 + L2 LINE L2 2665 2777 -536 2457 80 0 0 chr17 30877759 30878060 -58626493 - AluY SINE Alu -10 301 1 618 334 73 69 chr17 30878060 30878599 -58625954 + L2 LINE L2 2777 3313 0 2017 123 23 26 chr17 30879491 30879800 -58624753 - AluSq SINE Alu -5 308 1 1576 170 49 4 chr17 30880075 30880340 -58624213 - AluJo SINE Alu -22 290 14 3997 181 19 13 chr17 30880394 30880576 -58623977 - L1 LINE L1 -3196 4369 4190 2089 122 19 19 chr17 30880576 30880888 -58623665 - AluSx SINE Alu 0 312 1 3997 181 19 13 chr17 30880888 30881603 -58622950 - L1 LINE L1 -3375 4190 3463 1118 116 0 16 chr17 30881603 30881853 -58622700 + (TCCC)n Simple_repeat Simple_repeat 1 423 0 1019 162 5 5 chr17 30881853 30882044 -58622509 - L1 LINE L1 -4068 3497 3307 279 226 9 52 chr17 30882056 30882171 -58622382 + L1MA3 LINE L1 5297 5406 -2402 979 108 0 0 chr17 30882245 30882384 -58622169 + L1MA3 LINE L1 6167 6305 0 520 277 119 10 chr17 30882406 30882709 -58621844 - L1M4 LINE L1 -873 5273 4938 1257 81 121 6 chr17 30883723 30883897 -58620656 + AluY SINE Alu 105 298 -13 36 0 0 0 chr17 30883931 30883967 -58620586 + AT_rich Low_complexity Low_complexity 1 36 0 222 294 247 0 chr17 30884075 30884160 -58620393 + MIR SINE MIR 2 107 -155 609 222 175 36 chr17 30884162 30884414 -58620139 + L2 LINE L2 3025 3311 -2 2344 100 0 16 chr17 30884895 30885206 -58619347 + AluSx SINE Alu 1 306 -6 7775 178 84 35 chr17 30885701 30887349 -58617204 + MER52A LTR ERV1 27 1755 0 357 305 63 58 chr17 30887502 30887676 -58616877 + MER5B DNA MER1_type 3 177 -1 301 280 93 17 chr17 30887822 30887940 -58616613 + MIR SINE MIR 117 243 -19 790 224 137 15 chr17 30888685 30888890 -58615663 - MIR SINE MIR -31 231 2 474 142 19 246 chr17 30888970 30889238 -58615315 + L1ME3A LINE L1 5963 6169 -1 1811 166 3 25 chr17 30889640 30889954 -58614599 - AluJo SINE Alu -5 307 1 616 202 67 67 chr17 30889959 30890092 -58614461 - MER5B DNA MER1_type 0 178 43 2251 110 0 0 chr17 30890092 30890392 -58614161 + AluSx SINE Alu 1 300 -12 616 202 67 67 chr17 30890392 30890436 -58614117 - MER5B DNA MER1_type -134 44 1 2032 118 0 68 chr17 30891173 30891495 -58613058 + AluSx SINE Alu 1 300 -12 209 158 193 0 chr17 30892950 30893007 -58611546 + L2 LINE L2 3246 3313 0 1515 165 158 0 chr17 30893520 30893780 -58610773 - AluJo SINE Alu -1 301 1 2161 116 17 0 chr17 30893961 30894254 -58610299 - AluSx SINE Alu -14 298 1 1328 191 105 50 chr17 30895629 30896057 -58608496 + MER66A LTR ERV1 102 478 0 2518 63 0 0 chr17 30897118 30897421 -58607132 + AluY SINE Alu 1 303 -8 2133 113 0 23 chr17 30897637 30897777 -58606776 + AluSx SINE Alu 1 143 -169 225 0 0 0 chr17 30897777 30897802 -58606751 + (TA)n Simple_repeat Simple_repeat 2 26 0 2133 113 0 23 chr17 30897802 30897971 -58606582 + AluSx SINE Alu 143 303 -9 2486 69 0 0 chr17 30898626 30898929 -58605624 + AluY SINE Alu 3 305 -6 22 0 0 0 chr17 30899025 30899047 -58605506 + AT_rich Low_complexity Low_complexity 1 22 0 2111 98 21 7 chr17 30899235 30899547 -58605006 + AluSq SINE Alu 1 316 0 1163 200 0 37 chr17 30899559 30899804 -58604749 + AluJo SINE Alu 63 298 -14 2075 118 24 0 chr17 30899920 30900209 -58604344 + AluSx SINE Alu 1 296 -16 2286 88 3 0 chr17 30900475 30900770 -58603783 - AluY SINE Alu -15 296 1 272 228 65 33 chr17 30900890 30900982 -58603571 + L1M4 LINE L1 3885 3979 -2167 2173 91 13 10 chr17 30901007 30901305 -58603248 - AluSc SINE Alu -10 299 1 711 253 6 18 chr17 30901562 30901732 -58602821 + MIR SINE MIR 48 215 -47 597 200 22 67 chr17 30901740 30901875 -58602678 + FLAM_A SINE Alu 1 129 -4 23 54 0 0 chr17 30901937 30901974 -58602579 + AT_rich Low_complexity Low_complexity 1 37 0 194 263 88 0 chr17 30902141 30902198 -58602355 - L2 LINE L2 -2 3311 3250 2319 68 4 0 chr17 30902586 30902866 -58601687 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr17 30902869 30902891 -58601662 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 222 299 0 15 chr17 30903003 30903070 -58601483 + T-rich Low_complexity Low_complexity 4 69 0 1883 155 0 10 chr17 30903140 30903443 -58601110 + AluJb SINE Alu 1 300 -12 1097 159 0 0 chr17 30904344 30904507 -58600046 + AluJb SINE Alu 136 298 -14 553 70 233 0 chr17 30904848 30904934 -58599619 - THE1C LTR MaLR -269 106 1 788 21 0 0 chr17 30904934 30905031 -58599522 - THE1C-int LTR MaLR 0 1580 1484 2404 99 56 31 chr17 30905049 30905404 -58599149 - THE1B LTR MaLR 0 364 1 1489 183 62 7 chr17 30905418 30905692 -58598861 - AluJb SINE Alu -23 289 1 1804 175 87 4 chr17 30905692 30906079 -58598474 - L1MB2 LINE L1 -40 6131 5711 305 298 32 0 chr17 30906054 30906148 -58598405 - L1MC/D LINE L1 -1985 5823 5727 * 643 174 159 0 chr17 30906156 30906294 -58598259 - MLT1D LTR MaLR -8 497 338 1866 132 9 150 chr17 30906295 30906512 -58598041 + MLT1B LTR MaLR 1 126 -264 1767 167 36 13 chr17 30906512 30906817 -58597736 + AluJo SINE Alu 1 312 0 1866 132 9 150 chr17 30906817 30907040 -58597513 + MLT1B LTR MaLR 126 379 -11 872 233 27 99 chr17 30907048 30907214 -58597339 - MLT1D LTR MaLR -165 340 164 6343 94 2 66 chr17 30907214 30907758 -58596795 - L1PA13 LINE L1 -4 6159 5582 2289 107 0 3 chr17 30907758 30908058 -58596495 - AluSq SINE Alu -9 304 6 6343 94 2 66 chr17 30908058 30908354 -58596199 - L1PA13 LINE L1 -581 5582 5269 1998 143 31 0 chr17 30908354 30908647 -58595906 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 30908647 30908659 -58595894 - L1PA13 LINE L1 -894 5269 5258 2236 120 3 0 chr17 30908659 30908960 -58595593 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 30908960 30909275 -58595278 - L1PA13 LINE L1 -905 5258 5019 872 233 27 99 chr17 30909275 30909473 -58595080 - MLT1D LTR MaLR -341 164 2 1955 119 45 0 chr17 30909480 30909766 -58594787 - AluSg SINE Alu -11 299 1 190 306 0 0 chr17 30910255 30910304 -58594249 + L2 LINE L2 3263 3311 -2 969 154 51 133 chr17 30910885 30911119 -58593434 + MER58C DNA MER1_type 1 215 0 618 322 87 17 chr17 30911330 30911619 -58592934 + MLT1L LTR MaLR 215 523 -92 2203 100 3 3 chr17 30911941 30912286 -58592267 + AluSq SINE Alu 1 313 0 951 181 68 0 chr17 30912712 30912889 -58591664 + MER5A DNA MER1_type 1 189 0 2277 112 0 6 chr17 30913737 30914050 -58590503 + AluSx SINE Alu 1 311 -1 1634 170 16 29 chr17 30914743 30915055 -58589498 - AluJb SINE Alu -4 308 1 2128 117 3 3 chr17 30916374 30916673 -58587880 + AluSx SINE Alu 1 299 -13 640 234 153 22 chr17 30917953 30918262 -58586291 + L1MC4 LINE L1 5583 5654 -467 26 30 0 0 chr17 30918432 30918465 -58586088 + AT_rich Low_complexity Low_complexity 1 33 0 381 262 107 29 chr17 30919513 30919757 -58584796 + L1ME LINE L1 5355 5617 -504 807 169 0 7 chr17 30920393 30920535 -58584018 + FLAM_C SINE Alu 3 143 0 2104 122 3 0 chr17 30920633 30920927 -58583626 + AluSx SINE Alu 1 295 -17 2143 116 3 0 chr17 30921196 30921490 -58583063 + AluSx SINE Alu 1 295 -17 1957 150 7 0 chr17 30921929 30922216 -58582337 + AluJb SINE Alu 1 289 -23 31 20 0 20 chr17 30922273 30922291 -58582262 + AT_rich Low_complexity Low_complexity 1 18 -30 2135 118 40 40 chr17 30922291 30922665 -58581888 + THE1C LTR MaLR 1 374 -1 31 20 0 20 chr17 30922665 30922695 -58581858 + AT_rich Low_complexity Low_complexity 18 48 0 352 222 56 9 chr17 30922811 30922919 -58581634 + L2 LINE L2 2132 2244 -1070 259 204 0 19 chr17 30922964 30923018 -58581535 - Tigger5 DNA MER2_type -2270 53 1 1306 308 93 33 chr17 30923025 30923778 -58580775 + L2 LINE L2 2259 3054 -218 1989 92 11 26 chr17 31023883 31024156 -58480397 + AluSx SINE Alu 7 275 -37 22 0 0 0 chr17 31024159 31024181 -58480372 + AT_rich Low_complexity Low_complexity 1 22 0 2237 194 138 3 chr17 31024273 31024763 -58479790 + L1MC4 LINE L1 6435 6858 -1138 1776 141 36 0 chr17 31024763 31025040 -58479513 + AluJb SINE Alu 1 287 -25 192 77 0 0 chr17 31025040 31025066 -58479487 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2237 194 138 3 chr17 31025066 31025123 -58479430 + L1MC4 LINE L1 6857 7053 -943 1846 239 72 15 chr17 31025119 31025663 -58478890 + L1MC4a LINE L1 7165 7833 -95 * 1878 159 10 22 chr17 31025803 31026117 -58478436 + AluJb SINE Alu 3 312 0 1613 158 96 7 chr17 31026652 31026924 -58477629 + MER1B DNA MER1_type 44 339 0 300 314 10 20 chr17 31027134 31027236 -58477317 + MIR SINE MIR 33 133 -129 21 57 0 0 chr17 31027798 31027833 -58476720 + AT_rich Low_complexity Low_complexity 1 35 0 2352 108 0 0 chr17 31028481 31028786 -58475767 - AluSx SINE Alu -5 307 3 21 36 0 0 chr17 31028915 31028943 -58475610 + AT_rich Low_complexity Low_complexity 1 28 0 2160 121 7 3 chr17 31029046 31029344 -58475209 - AluSq SINE Alu -14 299 1 21 0 0 0 chr17 31029462 31029483 -58475070 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr17 31031416 31031444 -58473109 + (AGGTG)n Simple_repeat Simple_repeat 3 30 0 700 233 35 20 chr17 31031739 31031941 -58472612 + L1MC4 LINE L1 7688 7892 -150 247 188 0 25 chr17 31031962 31032042 -58472511 + (TA)n Simple_repeat Simple_repeat 1 78 0 234 207 58 46 chr17 31032043 31032130 -58472423 - L1MC4 LINE L1 -1337 6705 6618 234 219 19 67 chr17 31032051 31032156 -58472397 + L1MC4 LINE L1 6604 6703 -1339 266 210 29 43 chr17 31032157 31032295 -58472258 + (TA)n Simple_repeat Simple_repeat 1 136 0 180 111 0 0 chr17 31035032 31035059 -58469494 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1409 118 26 31 chr17 31037067 31037296 -58467257 + AluJb SINE Alu 32 259 -53 235 227 55 82 chr17 31038578 31038688 -58465865 + MIR SINE MIR 47 153 -109 1558 195 48 6 chr17 31040966 31041279 -58463274 - LTR2 LTR ERV1 0 449 124 373 230 41 43 chr17 31041389 31041444 -58463109 - L1ME LINE L1 -555 5566 5512 1969 149 7 3 chr17 31041444 31041733 -58462820 + AluSx SINE Alu 2 291 -21 2477 78 0 0 chr17 31041736 31042045 -58462508 + AluY SINE Alu 1 309 -2 373 230 41 43 chr17 31042045 31042142 -58462411 - L1ME LINE L1 -611 5510 5419 439 250 40 0 chr17 31042159 31042283 -58462270 + L1ME3A LINE L1 4915 5043 -1103 793 154 96 11 chr17 31042283 31042470 -58462083 + MER3 DNA MER1_type 2 164 -45 2311 74 3 0 chr17 31042555 31042863 -58461690 + AluSp SINE Alu 1 309 0 207 0 0 0 chr17 31042912 31042935 -58461618 + (A)n Simple_repeat Simple_repeat 1 23 0 1696 165 33 4 chr17 31042949 31043222 -58461331 + AluJb SINE Alu 11 291 -21 1080 211 41 71 chr17 31043273 31043637 -58460916 + L1ME3A LINE L1 5406 5758 -412 231 251 333 0 chr17 31043659 31043830 -58460723 + L1ME3A LINE L1 5935 6162 -8 305 281 10 10 chr17 31043886 31043982 -58460571 - MLT1K LTR MaLR 0 588 493 315 0 0 0 chr17 31043982 31044017 -58460536 + (A)n Simple_repeat Simple_repeat 1 35 0 438 296 86 13 chr17 31044210 31044362 -58460191 - MLT1K LTR MaLR -415 173 11 21 0 0 0 chr17 31045400 31045421 -58459132 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 25 chr17 31045609 31045632 -58458921 + AT_rich Low_complexity Low_complexity 1 24 -15 1563 211 18 0 chr17 31045632 31045916 -58458637 - AluJo SINE Alu -23 289 1 29 0 0 25 chr17 31045916 31045932 -58458621 + AT_rich Low_complexity Low_complexity 24 39 0 21 36 0 0 chr17 31046098 31046126 -58458427 + AT_rich Low_complexity Low_complexity 1 28 0 221 313 0 50 chr17 31046589 31046771 -58457782 + CT-rich Low_complexity Low_complexity 2 174 0 1979 154 27 0 chr17 31047686 31047984 -58456569 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 31047990 31048012 -58456541 + AT_rich Low_complexity Low_complexity 1 22 0 610 195 54 87 chr17 31048826 31048941 -58455612 + MER3 DNA MER1_type 31 148 -61 2361 100 0 0 chr17 31048941 31049252 -58455301 - AluY SINE Alu 0 311 1 2124 124 0 0 chr17 31049253 31049543 -58455010 - AluSc SINE Alu -19 290 1 610 195 54 87 chr17 31049543 31049610 -58454943 + MER3 DNA MER1_type 147 209 0 219 108 0 0 chr17 31049832 31049857 -58454696 + (A)n Simple_repeat Simple_repeat 1 28 -9 1470 128 50 157 chr17 31049857 31049992 -58454561 + AluJb SINE Alu 2 150 -152 2259 115 3 10 chr17 31049992 31050305 -58454248 + AluSx SINE Alu 1 311 -1 1470 128 50 157 chr17 31050305 31050506 -58454047 + AluJb SINE Alu 150 302 0 219 108 0 0 chr17 31050506 31050517 -58454036 + (A)n Simple_repeat Simple_repeat 27 37 0 914 199 65 16 chr17 31051101 31051287 -58453266 + MER58A DNA MER1_type 1 195 -29 271 26 154 0 chr17 31051332 31051371 -58453182 + MER58A DNA MER1_type 175 219 -5 2049 121 7 0 chr17 31051450 31051731 -58452822 + AluSx SINE Alu 5 287 -25 1986 139 14 0 chr17 31051765 31052053 -58452500 + AluJb SINE Alu 1 292 -20 25 51 0 0 chr17 31052843 31052882 -58451671 + AT_rich Low_complexity Low_complexity 1 39 0 679 271 106 18 chr17 31053968 31054186 -58450367 + MIR SINE MIR 26 262 0 1966 129 0 23 chr17 31054512 31054815 -58449738 - AluJb SINE Alu -15 297 2 1963 130 0 33 chr17 31055274 31055575 -58448978 - AluSg SINE Alu -19 291 1 339 246 18 18 chr17 31055646 31055760 -58448793 + L1M4 LINE L1 2451 2564 -3582 229 50 25 25 chr17 31055760 31055800 -58448753 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 1212 119 0 32 chr17 31055867 31056052 -58448501 - AluSg/x SINE Alu -9 303 125 896 257 70 45 chr17 31056053 31056192 -58448361 + L1M4 LINE L1 2678 2812 -3334 1462 149 114 21 chr17 31056192 31056513 -58448040 + AluSx SINE Alu 1 312 0 896 257 70 45 chr17 31056513 31056856 -58447697 + L1M4 LINE L1 2812 3172 -2974 284 312 107 58 chr17 31057005 31057370 -58447183 + L1M4 LINE L1 3729 4111 -2035 338 280 21 21 chr17 31057780 31057873 -58446680 + MIR3 SINE MIR 82 174 -34 842 316 17 0 chr17 31058048 31058285 -58446268 + MIR SINE MIR 8 248 -14 192 324 105 19 chr17 31058458 31058563 -58445990 + MIR SINE MIR 38 151 -57 2148 122 0 0 chr17 31058633 31058929 -58445624 + AluSx SINE Alu 1 296 -16 1083 177 105 5 chr17 31059414 31059623 -58444930 - MER46A DNA MER2_type -6 230 1 248 259 0 129 chr17 31059836 31059885 -58444668 + MIR3 SINE MIR 100 154 -54 438 20 0 0 chr17 31059885 31059936 -58444617 + (GA)n Simple_repeat Simple_repeat 1 51 0 297 0 0 0 chr17 31059935 31059968 -58444585 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 248 259 0 129 chr17 31059936 31060034 -58444519 + MIR3 SINE MIR 154 200 -8 2184 119 0 3 chr17 31060296 31060598 -58443955 + AluSx SINE Alu 1 301 -11 3656 207 69 9 chr17 31060807 31061707 -58442846 + L1MA9 LINE L1 5353 6291 -21 329 132 118 40 chr17 31061712 31061788 -58442765 + L1MB7 LINE L1 6089 6170 -14 455 143 44 55 chr17 31061822 31061913 -58442640 + L1MC1 LINE L1 6235 6324 -9 22 35 0 0 chr17 31062122 31062151 -58442402 + AT_rich Low_complexity Low_complexity 1 29 0 221 169 99 56 chr17 31062236 31062307 -58442246 - MIR SINE MIR -8 254 181 441 286 64 41 chr17 31064439 31064610 -58439943 - MER91A DNA MER1_type 0 196 22 1092 146 0 12 chr17 31065538 31065703 -58438850 - FRAM SINE Alu -15 161 1 399 190 26 60 chr17 31066312 31066428 -58438125 - MER103 DNA DNA -19 147 36 2072 113 0 14 chr17 31066428 31066721 -58437832 - AluSx SINE Alu -23 289 1 239 204 0 19 chr17 31066721 31066775 -58437778 - MER103 DNA DNA -106 60 8 192 146 42 21 chr17 31066856 31066904 -58437649 - MIR SINE MIR -65 143 95 1781 143 57 4 chr17 31067462 31067741 -58436812 + AluJo SINE Alu 1 294 -18 1319 130 0 0 chr17 31067885 31068062 -58436491 - AluSx SINE Alu -135 177 1 22 0 0 0 chr17 31069853 31069875 -58434678 + AT_rich Low_complexity Low_complexity 1 22 0 800 197 68 44 chr17 31070612 31070918 -58433635 - MER96B DNA MER1_type? -27 390 20 189 0 0 0 chr17 31070971 31070992 -58433561 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 250 210 90 40 chr17 31071113 31071213 -58433340 + L1MEd LINE L1 2 106 -6013 248 0 31 0 chr17 31071552 31071584 -58432969 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1056 116 0 0 chr17 31071599 31071745 -58432808 - AluSq/x SINE Alu -166 146 1 189 132 0 0 chr17 31071871 31071909 -58432644 + (A)n Simple_repeat Simple_repeat 1 38 0 202 308 0 0 chr17 31072280 31072332 -58432221 + MIR SINE MIR 79 130 -78 348 292 42 35 chr17 31072337 31072348 -58432205 + MIR SINE MIR 108 117 -145 2205 74 50 7 chr17 31072348 31072646 -58431907 - AluSx SINE Alu -1 311 1 348 292 42 35 chr17 31072646 31072778 -58431775 + MIR SINE MIR 117 252 -10 769 227 23 32 chr17 31072813 31073029 -58431524 + L1ME3A LINE L1 5945 6158 -12 1616 121 121 11 chr17 31073032 31073297 -58431256 - AluSg SINE Alu -16 294 1 207 276 0 0 chr17 31073745 31073803 -58430750 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr17 31074218 31074242 -58430311 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2164 98 0 43 chr17 31074317 31074643 -58429910 - AluSx SINE Alu 0 312 1 1811 91 102 4 chr17 31075031 31075306 -58429247 + AluSx SINE Alu 1 302 -10 1345 161 14 0 chr17 31078043 31078254 -58426299 - AluJb SINE Alu -25 287 74 1755 102 0 0 chr17 31078936 31079181 -58425372 - AluSg/x SINE Alu -2 310 66 1854 155 0 0 chr17 31079378 31079686 -58424867 - AluJb SINE Alu 0 308 1 416 77 0 0 chr17 31079781 31079833 -58424720 + Alu SINE Alu 2 53 -257 239 102 0 0 chr17 31079958 31080007 -58424546 + Alu SINE Alu 255 303 0 2309 66 13 3 chr17 31080189 31080493 -58424060 - AluY SINE Alu 0 311 5 998 104 17 6 chr17 31080497 31080670 -58423883 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1617 130 91 0 chr17 31080670 31080924 -58423629 - AluSx SINE Alu -35 277 1 361 63 63 0 chr17 31081833 31081896 -58422657 + G-rich Low_complexity Low_complexity 2 68 0 1752 153 47 7 chr17 31082242 31082421 -58422132 - AluSq SINE Alu 0 313 116 210 37 0 0 chr17 31082421 31082448 -58422105 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1752 153 47 7 chr17 31082448 31082569 -58421984 - AluSq SINE Alu -197 116 1 292 353 81 0 chr17 31084717 31084853 -58419700 + MIR3 SINE MIR 6 152 -56 375 228 59 40 chr17 31084894 31084995 -58419558 + MER5A DNA MER1_type 65 167 -22 206 257 71 62 chr17 31084898 31085011 -58419542 - MER5A DNA MER1_type -57 132 19 * 186 261 130 0 chr17 31086014 31086083 -58418470 - L2 LINE L2 -56 3257 3180 2372 86 0 0 chr17 31086538 31086842 -58417711 - AluSx SINE Alu -7 305 2 379 176 0 93 chr17 31086952 31087145 -58417408 + (CAGCC)n Simple_repeat Simple_repeat 1 175 0 2065 111 10 0 chr17 31089787 31090084 -58414469 - AluSx SINE Alu -12 300 1 25 0 0 0 chr17 31090567 31090592 -58413961 + AT_rich Low_complexity Low_complexity 1 25 0 2136 121 0 0 chr17 31091984 31092297 -58412256 + AluSq SINE Alu 1 313 0 1051 139 52 0 chr17 31092297 31092469 -58412084 + AluSg/x SINE Alu 132 312 0 190 214 24 0 chr17 31092469 31092511 -58412042 - L2 LINE L2 -79 3193 3151 1896 148 0 6 chr17 31093015 31093030 -58411523 - AluJb SINE Alu -3 309 295 228 35 0 0 chr17 31093030 31093059 -58411494 + (TG)n Simple_repeat Simple_repeat 2 30 0 1896 148 0 6 chr17 31093059 31093354 -58411199 - AluJb SINE Alu -17 295 1 653 263 67 10 chr17 31093732 31093926 -58410627 + MIR SINE MIR 46 250 -12 323 270 57 21 chr17 31094076 31094203 -58410350 - MER5A DNA MER1_type -5 173 30 427 183 15 99 chr17 31095248 31095282 -58409271 - LTR2 LTR ERV1 -288 161 126 2146 65 18 0 chr17 31095282 31095597 -58408956 - AluY SINE Alu 0 320 1 427 183 15 99 chr17 31095597 31095692 -58408861 - LTR2 LTR ERV1 -323 126 42 183 219 188 10 chr17 31095969 31096065 -58408488 + L2 LINE L2 3143 3255 -17 388 285 16 16 chr17 31096140 31096263 -58408290 + L1MC4a LINE L1 5777 5899 -1909 245 216 14 54 chr17 31096487 31096561 -58407992 + GA-rich Low_complexity Low_complexity 3 73 0 204 321 71 54 chr17 31096719 31096831 -58407722 - MIR SINE MIR -68 140 27 1926 85 4 4 chr17 31097438 31097697 -58406856 - AluSc SINE Alu -16 293 35 219 286 14 107 chr17 31097734 31097874 -58406679 - MIR SINE MIR -134 128 2 201 279 88 0 chr17 31098053 31098121 -58406432 + L3 LINE CR1 1338 1411 -166 633 269 106 82 chr17 31098153 31098607 -58405946 - L2 LINE L2 -35 3278 2814 1691 129 32 58 chr17 31099020 31099330 -58405223 + AluSx SINE Alu 1 302 -10 274 197 225 2 chr17 31100066 31100198 -58404355 - L1MEc LINE L1 -2346 3869 3702 318 227 303 8 chr17 31100209 31100341 -58404212 - HAL1 LINE L1 -1792 715 545 891 263 122 24 chr17 31100371 31100740 -58403813 - HAL1 LINE L1 -2036 471 67 722 228 125 115 chr17 31101055 31101727 -58402826 - L1MEc LINE L1 -3117 3098 2420 700 317 121 29 chr17 31101808 31102328 -58402225 - L1MEc LINE L1 -3915 2481 1914 326 295 60 62 chr17 31103912 31104132 -58400421 - MIR SINE MIR -46 216 5 5989 111 44 10 chr17 31104682 31105019 -58399534 + L1PB2 LINE L1 4950 5274 -877 183 100 0 0 chr17 31105019 31105049 -58399504 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5989 111 44 10 chr17 31105049 31105884 -58398669 + L1PB2 LINE L1 5274 6151 0 1527 170 95 11 chr17 31106396 31106766 -58397787 - Charlie1 DNA MER1_type -1 2760 2360 280 213 164 0 chr17 31106778 31106839 -58397714 - Charlie1 DNA MER1_type -2690 71 1 918 147 0 0 chr17 31107054 31107197 -58397356 + FLAM_C SINE Alu 1 143 0 393 188 29 0 chr17 31107218 31107287 -58397266 + AluSc SINE Alu 208 278 -21 367 206 109 0 chr17 31109664 31109756 -58394797 - L1ME LINE L1 -350 5771 5670 1230 125 184 0 chr17 31109775 31110061 -58394492 + Tigger3(Golem) DNA MER2_type 6 3022 -7 29 28 0 0 chr17 31110061 31110097 -58394456 + AT_rich Low_complexity Low_complexity 1 36 0 432 308 37 78 chr17 31110168 31110257 -58394296 - L1ME LINE L1 -755 5391 5300 2156 84 3 3 chr17 31110257 31110544 -58394009 + AluSg SINE Alu 2 288 -22 1493 188 22 0 chr17 31110550 31110826 -58393727 - AluJo SINE Alu -30 282 1 432 308 37 78 chr17 31110826 31110970 -58393583 - L1ME LINE L1 -851 5295 5165 2055 117 0 3 chr17 31110970 31111269 -58393284 - AluSx SINE Alu -14 298 1 432 308 37 78 chr17 31111269 31111349 -58393204 - L1ME LINE L1 -981 5165 5083 200 233 0 0 chr17 31111363 31111406 -58393147 + A-rich Low_complexity Low_complexity 1 43 0 392 186 24 97 chr17 31111653 31111777 -58392776 + L1MC4a LINE L1 5581 5695 -2113 197 188 0 0 chr17 31111777 31111809 -58392744 - L2 LINE L2 -17 3296 3265 782 235 125 19 chr17 31111809 31112158 -58392395 + L1MC4a LINE L1 5670 5814 -349 804 200 0 0 chr17 31112641 31112771 -58391782 - FLAM_A SINE Alu -3 130 1 960 219 24 5 chr17 31114698 31114903 -58389650 - MIR SINE MIR -46 216 8 1950 99 3 18 chr17 31115236 31115519 -58389034 + AluSx SINE Alu 1 279 -33 219 69 0 0 chr17 31115519 31115548 -58389005 + (CAA)n Simple_repeat Simple_repeat 2 30 0 193 292 83 42 chr17 31115857 31115953 -58388600 + MIR SINE MIR 51 150 -112 293 243 10 29 chr17 31117036 31117139 -58387414 + L1MC5 LINE L1 7831 7931 -30 2353 71 3 3 chr17 31117152 31117463 -58387090 + AluY SINE Alu 1 311 0 438 270 30 0 chr17 31117794 31117894 -58386659 + MIR SINE MIR 3 105 -157 30 27 0 0 chr17 31117966 31118003 -58386550 + AT_rich Low_complexity Low_complexity 1 37 0 269 194 224 10 chr17 31120551 31120649 -58383904 + L1ME4a LINE L1 5984 6102 -19 2463 71 10 0 chr17 31120882 31121190 -58383363 + AluY SINE Alu 1 311 0 1911 115 38 45 chr17 31123391 31123705 -58380848 + AluSx SINE Alu 1 312 0 2193 119 0 7 chr17 31124529 31124831 -58379722 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr17 31126091 31126112 -58378441 + AT_rich Low_complexity Low_complexity 1 21 0 2447 86 0 0 chr17 31127476 31127777 -58376776 - AluSx SINE Alu -11 301 1 1948 154 10 0 chr17 31129010 31129303 -58375250 + AluJb SINE Alu 1 296 -16 307 75 0 0 chr17 31129307 31129347 -58375206 + MER4E LTR ERV1 653 692 -74 1091 163 0 6 chr17 31129364 31129542 -58375011 + AluJb SINE Alu 120 296 -16 2117 117 14 0 chr17 31129689 31129812 -58374741 + AluSg SINE Alu 1 121 -189 246 32 0 0 chr17 31129812 31129843 -58374710 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 2117 117 14 0 chr17 31129843 31130010 -58374543 + AluSg SINE Alu 121 295 -15 371 250 60 110 chr17 31130235 31130435 -58374118 - MIR SINE MIR -26 236 47 501 269 85 0 chr17 31130552 31130682 -58373871 - MIR SINE MIR -75 187 47 1077 223 50 37 chr17 31131068 31131368 -58373185 - L1ME3 LINE L1 -65 6097 5794 27 49 0 0 chr17 31132174 31132215 -58372338 + AT_rich Low_complexity Low_complexity 1 41 0 511 300 101 9 chr17 31132741 31132968 -58371585 + L2 LINE L2 3057 3304 -9 1822 142 22 4 chr17 31132999 31133274 -58371279 - AluSx SINE Alu -32 280 1 983 188 0 0 chr17 31133965 31134130 -58370423 + AluJb SINE Alu 137 301 -11 1834 169 0 10 chr17 31134786 31135087 -58369466 - AluJo SINE Alu -14 298 1 234 116 0 0 chr17 31135376 31135419 -58369134 + (T)n Simple_repeat Simple_repeat 1 43 0 336 208 236 28 chr17 31135625 31135731 -58368822 + MER5A DNA MER1_type 61 188 -1 319 243 0 0 chr17 31135909 31135979 -58368574 + L2 LINE L2 2475 2544 -770 835 119 8 8 chr17 31135982 31136100 -58368453 - FRAM SINE Alu -18 158 41 195 269 15 60 chr17 31136182 31136249 -58368304 - MER5B DNA MER1_type -49 129 66 598 187 41 65 chr17 31136380 31136503 -58368050 - FLAM_A SINE Alu -13 120 1 1730 163 27 7 chr17 31136529 31136823 -58367730 - AluSx SINE Alu -8 304 5 1320 191 39 39 chr17 31137189 31137471 -58367082 + AluJo SINE Alu 1 282 -30 2346 93 3 3 chr17 31137828 31138129 -58366424 - AluSc SINE Alu -8 301 1 606 247 145 31 chr17 31138214 31138441 -58366112 - MIR SINE MIR -3 259 7 230 276 35 0 chr17 31138517 31138575 -58365978 - L2 LINE L2 0 3313 3254 * 254 312 128 0 chr17 31138574 31138699 -58365854 - MIR SINE MIR -120 142 2 323 345 134 39 chr17 31139148 31139432 -58365121 + L2 LINE L2 2912 3222 -50 21 36 0 0 chr17 31140947 31140975 -58363578 + AT_rich Low_complexity Low_complexity 1 28 0 1008 200 96 0 chr17 31141347 31141567 -58362986 - AluJo SINE Alu -4 308 68 231 147 0 0 chr17 31141701 31141735 -58362818 + U2 snRNA snRNA 2 35 -153 596 217 9 0 chr17 31142383 31142489 -58362064 - U6 snRNA snRNA 0 107 1 1877 128 43 0 chr17 31142666 31142947 -58361606 - AluJb SINE Alu -9 303 11 1936 148 10 7 chr17 31142993 31143297 -58361256 + AluSx SINE Alu 1 305 -7 25 0 0 0 chr17 31143417 31143442 -58361111 + AT_rich Low_complexity Low_complexity 1 25 0 260 176 44 29 chr17 31144793 31144861 -58359692 - L1ME1 LINE L1 -5 6161 6093 243 0 0 0 chr17 31146263 31146290 -58358263 + (CGG)n Simple_repeat Simple_repeat 1 27 0 307 298 70 121 chr17 31147578 31147991 -58356562 - L2 LINE L2 -13 3259 2868 280 369 15 42 chr17 31148243 31148506 -58356047 - L2 LINE L2 -835 2479 2224 680 251 25 69 chr17 31148564 31148716 -58355837 + MER91A DNA MER1_type 3 145 -51 2300 99 3 0 chr17 31148716 31149010 -58355543 - AluSg SINE Alu -15 295 1 680 251 25 69 chr17 31149010 31149060 -58355493 + MER91A DNA MER1_type 145 196 0 405 265 197 16 chr17 31149068 31149317 -58355236 - L2 LINE L2 -1194 2120 1827 1200 145 0 141 chr17 31149879 31150148 -58354405 + AluJo SINE Alu 21 251 -61 2338 99 0 3 chr17 31150351 31150654 -58353899 - AluSq SINE Alu -11 302 1 345 270 31 68 chr17 31150840 31150928 -58353625 + Charlie8 DNA MER1_type 1 82 -259 1674 161 39 4 chr17 31150928 31151207 -58353346 + AluJb SINE Alu 1 289 -23 345 270 31 68 chr17 31151207 31151281 -58353272 + Charlie8 DNA MER1_type 82 157 -184 627 141 91 0 chr17 31151294 31151393 -58353160 + AluJb SINE Alu 2 109 -203 3538 201 139 53 chr17 31151393 31152434 -58352119 + LTR28 LTR ERV1 2 1755 0 1207 173 15 0 chr17 31152434 31152636 -58351917 + AluSq SINE Alu 105 309 -4 288 289 24 12 chr17 31153227 31153310 -58351243 - L2 LINE L2 -303 2969 2886 404 263 80 7 chr17 31153917 31154054 -58350499 - L2 LINE L2 0 3313 3167 888 150 0 0 chr17 31154090 31154223 -58350330 + AluSq/x SINE Alu 1 133 -180 604 281 132 17 chr17 31154223 31154518 -58350035 - L2 LINE L2 -19 3294 2966 3753 129 45 72 chr17 31154563 31155297 -58349256 - LTR8A LTR ERV1 -13 714 1 401 282 29 0 chr17 31155365 31155468 -58349085 - MLT1L LTR MaLR -347 268 163 206 267 178 0 chr17 31155585 31155675 -58348878 - L2 LINE L2 -522 2792 2687 24 0 0 0 chr17 31155701 31155725 -58348828 + AT_rich Low_complexity Low_complexity 1 24 0 425 160 34 17 chr17 31155743 31155862 -58348691 + L1ME LINE L1 5266 5386 -973 3754 138 30 8 chr17 31155907 31156177 -58348376 - MER41B LTR ERV1 -11 624 361 2205 77 0 67 chr17 31156177 31156490 -58348063 - AluSg SINE Alu -18 292 1 3754 138 30 8 chr17 31156490 31156829 -58347724 - MER41B LTR ERV1 -274 361 2 462 320 8 0 chr17 31156892 31157020 -58347533 + L1ME LINE L1 5523 5651 -519 929 187 53 21 chr17 31157030 31157217 -58347336 - MER3 DNA MER1_type -5 204 12 227 261 75 52 chr17 31157218 31157352 -58347201 + L1ME LINE L1 5649 5785 -377 2430 97 0 0 chr17 31157501 31157810 -58346743 - AluSc SINE Alu 0 309 1 2063 134 3 0 chr17 31157945 31158243 -58346310 - AluSg SINE Alu -6 304 6 1919 105 73 0 chr17 31158413 31158699 -58345854 + AluSx SINE Alu 1 307 -5 275 278 30 95 chr17 31158699 31158808 -58345745 - L2 LINE L2 -636 2678 2582 2065 101 13 32 chr17 31158808 31159124 -58345429 + AluSx SINE Alu 1 310 -2 275 278 30 95 chr17 31159124 31159183 -58345370 - L2 LINE L2 -732 2582 2521 314 306 61 50 chr17 31159221 31159401 -58345152 - L2 LINE L2 -160 3112 2931 1986 84 30 4 chr17 31159401 31159663 -58344890 - AluSg SINE Alu -12 298 30 2378 79 3 10 chr17 31159674 31159977 -58344576 - AluY SINE Alu -10 301 1 2257 104 0 0 chr17 31160583 31160881 -58343672 - AluSx SINE Alu -14 298 1 567 43 0 0 chr17 31161156 31161226 -58343327 + (GAAA)n Simple_repeat Simple_repeat 1 70 0 214 148 66 49 chr17 31161404 31161465 -58343088 + MIR SINE MIR 100 161 -101 985 244 0 42 chr17 31161466 31161704 -58342849 - MIR SINE MIR -4 258 31 1924 127 6 41 chr17 31161722 31162036 -58342517 + AluJb SINE Alu 1 303 -9 1902 132 21 7 chr17 31162435 31162722 -58341831 + AluSx SINE Alu 1 291 -21 1258 117 6 6 chr17 31163035 31163214 -58341339 - AluSg/x SINE Alu -12 298 120 1302 160 13 4 chr17 31163250 31163475 -58341078 - AluJb SINE Alu -81 231 5 229 336 126 28 chr17 31163504 31163647 -58340906 - MIR3 SINE MIR -9 199 43 1220 188 0 26 chr17 31164292 31164446 -58340107 - AluJo SINE Alu -24 288 131 252 0 0 0 chr17 31164446 31164474 -58340079 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2155 113 0 0 chr17 31164474 31164756 -58339797 - AluSx SINE Alu -30 282 1 1220 188 0 26 chr17 31164756 31164829 -58339724 - AluJo SINE Alu -179 133 66 715 264 78 30 chr17 31164949 31165180 -58339373 + MIR SINE MIR 2 243 -19 480 267 22 30 chr17 31165443 31165578 -58338975 + MIR SINE MIR 73 206 -56 317 265 24 0 chr17 31165768 31165851 -58338702 + L1MC4 LINE L1 6608 6692 -1350 300 188 0 0 chr17 31165871 31165935 -58338618 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 188 331 62 62 chr17 31166221 31166351 -58338202 + MIR SINE MIR 97 226 -36 223 323 161 0 chr17 31166671 31166795 -58337758 + MIR SINE MIR 46 189 -73 460 217 178 7 chr17 31167030 31167102 -58337451 + Charlie8 DNA MER1_type 88 146 -184 2233 127 13 0 chr17 31167102 31167410 -58337143 + AluSx SINE Alu 1 312 0 460 217 178 7 chr17 31167410 31167489 -58337064 + Charlie8 DNA MER1_type 146 265 -65 24 71 0 0 chr17 31167890 31167918 -58336635 + AT_rich Low_complexity Low_complexity 1 28 0 2006 127 3 7 chr17 31167929 31168213 -58336340 - AluSq SINE Alu -30 283 1 2000 127 7 0 chr17 31168222 31168505 -58336048 - AluSx SINE Alu -25 287 3 30 0 0 0 chr17 31168509 31168539 -58336014 + AT_rich Low_complexity Low_complexity 1 30 0 350 231 218 48 chr17 31169135 31169282 -58335271 - MIR3 SINE MIR -7 201 30 1916 138 34 0 chr17 31170268 31170559 -58333994 - AluSx SINE Alu -10 302 2 2145 129 0 3 chr17 31171768 31172071 -58332482 + AluSx SINE Alu 1 302 -10 2094 142 7 0 chr17 31172079 31172382 -58332171 + AluJb SINE Alu 1 305 -7 424 271 31 89 chr17 31173236 31173421 -58331132 - MIR SINE MIR 0 262 91 1932 121 0 76 chr17 31173421 31173751 -58330802 + AluSx SINE Alu 1 305 -7 424 271 31 89 chr17 31173751 31173790 -58330763 - MIR SINE MIR -171 91 51 2099 129 0 3 chr17 31174339 31174633 -58329920 - AluSg SINE Alu -17 293 1 824 198 10 78 chr17 31175010 31175159 -58329394 + FAM SINE Alu 1 159 -26 2145 135 0 0 chr17 31175159 31175455 -58329098 - AluSx SINE Alu -16 296 1 823 168 0 0 chr17 31175461 31175592 -58328961 - FLAM_C SINE Alu -1 132 2 824 198 10 78 chr17 31175592 31175627 -58328926 + FAM SINE Alu 7 43 -6 482 245 63 63 chr17 31175796 31175939 -58328614 - L2 LINE L2 -7 3265 3123 1801 174 3 0 chr17 31176138 31176425 -58328128 - AluJb SINE Alu -24 288 1 2188 109 10 10 chr17 31176786 31177097 -58327456 - AluSq SINE Alu -2 311 1 1737 169 23 19 chr17 31177190 31177497 -58327056 + AluJo SINE Alu 5 312 0 186 261 0 62 chr17 31179030 31179095 -58325458 - L2 LINE L2 -2 3270 3210 235 250 0 0 chr17 31179483 31179535 -58325018 - L2 LINE L2 0 3313 3262 316 291 82 13 chr17 31179786 31179944 -58324609 + MIR SINE MIR 54 222 -40 226 157 84 60 chr17 31180666 31180749 -58323804 - L1ME4a LINE L1 -104 6017 5933 634 294 106 33 chr17 31180810 31181205 -58323348 - L1MC4a LINE L1 -280 5884 5461 306 0 0 0 chr17 31181340 31181374 -58323179 + (CA)n Simple_repeat Simple_repeat 2 35 0 1505 142 0 0 chr17 31181512 31181724 -58322829 + AluJb SINE Alu 84 295 -17 1112 159 0 70 chr17 31181839 31182073 -58322480 - AluJo SINE Alu 0 315 96 2009 148 3 3 chr17 31182332 31182630 -58321923 - AluSx SINE Alu -14 298 1 325 279 29 15 chr17 31182754 31182890 -58321663 + L1P LINE L1 5212 5349 -797 2237 102 0 40 chr17 31182968 31183347 -58321206 + AluSx SINE Alu 1 366 0 352 203 173 3 chr17 31183356 31183465 -58321088 + L1ME4a LINE L1 5458 5585 -536 366 252 26 33 chr17 31183862 31184013 -58320540 + L1ME4a LINE L1 5734 5883 -238 473 203 20 81 chr17 31184028 31184090 -58320463 - MER5B DNA MER1_type -2 176 112 1639 164 24 47 chr17 31184090 31184388 -58320165 + AluJo SINE Alu 1 291 -21 473 203 20 81 chr17 31184388 31184473 -58320080 - MER5B DNA MER1_type -66 112 38 226 180 16 49 chr17 31184602 31184663 -58319890 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 2304 91 7 7 chr17 31185206 31185503 -58319050 + AluSq SINE Alu 1 297 -16 326 154 68 60 chr17 31185566 31185683 -58318870 + L1ME4a LINE L1 6002 6119 -2 2387 73 7 13 chr17 31185878 31186180 -58318373 - AluY SINE Alu -11 300 1 459 245 192 43 chr17 31187175 31187389 -58317164 - MIR SINE MIR -25 237 2 2301 97 3 40 chr17 31187440 31187761 -58316792 + AluSx SINE Alu 1 309 -3 909 213 107 40 chr17 31188828 31189081 -58315472 - AluSp SINE Alu 0 313 44 644 266 85 11 chr17 31189264 31189452 -58315101 + MIR SINE MIR 61 262 0 791 268 140 24 chr17 31189645 31189723 -58314830 - LTR16C LTR ERVL 0 491 423 2091 131 0 13 chr17 31189723 31190029 -58314524 + AluSx SINE Alu 1 302 -10 791 268 140 24 chr17 31190029 31190279 -58314274 - LTR16C LTR ERVL -68 423 125 666 276 57 11 chr17 31190410 31190674 -58313879 + L1MC4 LINE L1 7741 8016 -26 271 265 73 0 chr17 31190704 31190772 -58313781 - L2 LINE L2 -4 3309 3237 501 227 31 16 chr17 31190780 31190908 -58313645 - MER91B DNA MER1_type -13 177 48 1850 125 26 51 chr17 31191367 31191678 -58312875 + AluJb SINE Alu 1 303 -9 2258 98 24 0 chr17 31192278 31192575 -58311978 - AluSg1 SINE Alu -5 304 1 189 0 0 0 chr17 31192615 31192636 -58311917 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1809 164 14 0 chr17 31192653 31193107 -58311446 - AluSx SINE Alu 0 458 1 666 155 5 136 chr17 31193224 31193437 -58311116 + MER53 DNA DNA 1 185 -4 425 255 10 0 chr17 31193453 31193551 -58311002 - MIR SINE MIR -59 149 51 321 89 0 0 chr17 31193683 31193728 -58310825 + (TG)n Simple_repeat Simple_repeat 2 46 0 2300 84 0 7 chr17 31193899 31194213 -58310340 - AluSx SINE Alu 0 312 1 312 265 41 0 chr17 31194248 31194346 -58310207 - MIR SINE MIR -48 214 113 654 195 5 125 chr17 31194939 31195139 -58309414 + MER69A DNA AcHobo 1 176 -1 2021 118 49 0 chr17 31195511 31195799 -58308754 - AluSx SINE Alu -10 302 1 816 231 65 10 chr17 31196006 31196205 -58308348 - MER63A DNA MER1_type 0 210 1 285 98 0 0 chr17 31196222 31196263 -58308290 + (CA)n Simple_repeat Simple_repeat 2 42 0 288 274 144 7 chr17 31246473 31246626 -58257927 + Charlie7 DNA MER1_type 56 229 -2383 21 0 0 0 chr17 31246653 31246674 -58257879 + AT_rich Low_complexity Low_complexity 1 21 0 749 229 17 42 chr17 31246751 31246991 -58257562 + Charlie7 DNA MER1_type 1475 1708 -904 385 193 29 107 chr17 31247029 31247100 -58257453 + Charlie7 DNA MER1_type 1714 1770 -842 1498 137 7 121 chr17 31247100 31247406 -58257147 + AluJo SINE Alu 38 308 -4 385 193 29 107 chr17 31247406 31247474 -58257079 + Charlie7 DNA MER1_type 1770 1842 -770 1232 69 162 0 chr17 31247474 31247647 -58256906 + L1P LINE L1 4194 4394 -1752 781 216 186 29 chr17 31247657 31248219 -58256334 + Charlie7 DNA MER1_type 1861 2547 -65 187 171 66 0 chr17 31248226 31248302 -58256251 + (TA)n Simple_repeat Simple_repeat 1 81 0 244 185 38 147 chr17 31248309 31248383 -58256170 + Charlie7 DNA MER1_type 2473 2553 -59 1811 171 0 3 chr17 31248383 31248669 -58255884 + AluJb SINE Alu 1 285 -27 216 0 0 0 chr17 31248669 31248693 -58255860 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 244 185 38 147 chr17 31248693 31248774 -58255779 + Charlie7 DNA MER1_type 2551 2612 0 650 154 29 0 chr17 31249156 31249260 -58255293 + U6 snRNA snRNA 1 107 0 443 300 33 24 chr17 31249521 31249731 -58254822 + MIR SINE MIR 51 262 0 1095 296 33 46 chr17 31249994 31250130 -58254423 + HAL1b LINE L1 127 263 -1085 2493 70 0 7 chr17 31250130 31250431 -58254122 + AluY SINE Alu 1 299 -12 1095 296 33 46 chr17 31250431 31250818 -58253735 + HAL1b LINE L1 263 643 -705 2307 111 3 3 chr17 31250818 31251125 -58253428 + AluSx SINE Alu 1 307 -5 1095 296 33 46 chr17 31251125 31251232 -58253321 + HAL1b LINE L1 643 750 -598 2334 89 3 0 chr17 31251954 31252247 -58252306 + AluSc SINE Alu 1 294 -15 871 185 0 62 chr17 31252261 31252439 -58252114 + FRAM SINE Alu 1 167 -9 1531 172 19 22 chr17 31253211 31253375 -58251178 - AluJb SINE Alu -14 298 134 306 0 0 0 chr17 31253375 31253409 -58251144 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1531 172 19 22 chr17 31253409 31253511 -58251042 - AluJb SINE Alu -178 134 33 2432 97 0 3 chr17 31253514 31253825 -58250728 - AluSg SINE Alu 0 310 1 228 129 0 0 chr17 31253893 31253924 -58250629 + Alu SINE Alu 1 31 -270 366 120 0 0 chr17 31253929 31253979 -58250574 + AluS SINE Alu 17 66 -237 412 133 0 0 chr17 31253982 31254042 -58250511 - AluS SINE Alu -258 60 1 189 0 0 0 chr17 31254529 31254550 -58250003 + (TC)n Simple_repeat Simple_repeat 1 21 0 2123 118 3 7 chr17 31254552 31254849 -58249704 - AluSx SINE Alu -15 297 2 988 147 28 6 chr17 31256042 31256102 -58248451 - L1MB5 LINE L1 0 6174 6117 1462 150 4 4 chr17 31256102 31256329 -58248224 + AluJb SINE Alu 1 227 -85 988 147 28 6 chr17 31256329 31256445 -58248108 - L1MB5 LINE L1 -57 6117 5994 27 29 0 0 chr17 31256452 31256486 -58248067 + AT_rich Low_complexity Low_complexity 1 34 0 816 154 0 0 chr17 31256495 31256612 -58247941 - FLAM_C SINE Alu -26 117 1 2192 124 20 0 chr17 31256662 31256968 -58247585 + AluSx SINE Alu 1 312 0 241 217 29 29 chr17 31257496 31257565 -58246988 + MIR SINE MIR 83 151 -111 686 272 102 92 chr17 31257592 31258122 -58246431 - LTR67 LTR ERVL -19 538 4 991 288 53 55 chr17 31258405 31258901 -58245652 + MLT1K LTR MaLR 63 572 -16 1654 167 3 39 chr17 31259227 31259532 -58245021 + AluJb SINE Alu 1 294 -18 1015 244 114 52 chr17 31259673 31260095 -58244458 - LTR16A1 LTR ERVL 0 457 10 23 78 0 0 chr17 31260159 31260210 -58244343 + AT_rich Low_complexity Low_complexity 1 51 0 1963 151 10 6 chr17 31260340 31260651 -58243902 + AluSx SINE Alu 1 312 0 2180 118 7 7 chr17 31260831 31261137 -58243416 - AluSq SINE Alu -7 306 1 1803 196 21 21 chr17 31261952 31262375 -58242178 + L2 LINE L2 1285 1707 -1607 1989 141 0 21 chr17 31262375 31262488 -58242065 + AluJb SINE Alu 1 115 -197 3802 114 52 22 chr17 31262488 31263084 -58241469 - LTR18B LTR ERVL 0 614 1 1989 141 0 21 chr17 31263084 31263261 -58241292 + AluJb SINE Alu 115 285 -27 206 325 13 10 chr17 31263940 31264095 -58240458 - MIR SINE MIR -3 259 41 27 29 0 0 chr17 31264143 31264177 -58240376 + AT_rich Low_complexity Low_complexity 1 34 0 1083 49 0 0 chr17 31264177 31264300 -58240253 - AluSq/x SINE Alu -181 132 10 731 229 120 0 chr17 31264404 31264596 -58239957 + MIR SINE MIR 18 232 -30 248 211 53 0 chr17 31264922 31264979 -58239574 - L1MA4 LINE L1 -111 6189 6130 613 133 0 78 chr17 31264981 31265109 -58239444 + L1MA4 LINE L1 6183 6300 0 367 319 169 10 chr17 31265805 31266112 -58238441 + L2 LINE L2 2349 2704 -610 221 220 136 0 chr17 31266427 31266486 -58238067 + L2 LINE L2 3246 3312 -1 22 0 0 0 chr17 31267604 31267626 -58236927 + GC_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr17 31267883 31267918 -58236635 + GC_rich Low_complexity Low_complexity 1 35 0 260 258 30 0 chr17 31268690 31268756 -58235797 - MIR3 SINE MIR -12 196 129 221 262 134 39 chr17 31268783 31268974 -58235579 - MIR SINE MIR -21 241 30 214 272 21 147 chr17 31271465 31271656 -58232897 + L2 LINE L2 3147 3313 0 549 284 38 91 chr17 31271930 31272194 -58232359 - MIR SINE MIR -6 256 7 263 119 0 0 chr17 31273159 31273201 -58231352 - MER116 DNA Mariner -1 79 38 316 146 0 0 chr17 31273211 31273259 -58231294 + Alu SINE Alu 1 48 -252 533 302 24 60 chr17 31274043 31274197 -58230356 - L1MC4 LINE L1 0 8042 7884 258 56 0 0 chr17 31274197 31274233 -58230320 + (CA)n Simple_repeat Simple_repeat 1 36 0 533 302 24 60 chr17 31274233 31274498 -58230055 - L1MC4 LINE L1 -158 7884 7638 353 309 132 36 chr17 31274501 31274721 -58229832 - L1MC4 LINE L1 -479 7563 7323 1762 190 3 7 chr17 31274732 31275021 -58229532 - AluJo SINE Alu -24 288 1 3065 153 39 50 chr17 31275103 31275777 -58228776 - L1MB4 LINE L1 -1 6179 5514 2050 127 7 3 chr17 31275805 31276108 -58228445 - AluSq SINE Alu 0 305 2 3018 186 65 28 chr17 31276486 31277350 -58227203 - MER52A LTR ERV1 -1 1277 348 1989 139 14 3 chr17 31278713 31279008 -58225545 - AluSx SINE Alu -14 298 1 325 267 99 10 chr17 31279058 31279159 -58225394 - MIR3 SINE MIR -7 201 92 385 280 9 37 chr17 31279163 31279270 -58225283 - L2 LINE L2 0 3272 3169 2208 125 0 0 chr17 31279526 31279822 -58224731 - AluSp SINE Alu -17 296 1 189 0 0 0 chr17 31279825 31279846 -58224707 + (T)n Simple_repeat Simple_repeat 1 21 0 589 186 81 0 chr17 31279994 31280118 -58224435 + FLAM_A SINE Alu 8 141 -1 514 259 50 96 chr17 31280274 31280513 -58224040 + MIR SINE MIR 2 229 -33 326 312 40 24 chr17 31280527 31280652 -58223901 + L2 LINE L2 3187 3313 0 2311 103 0 0 chr17 31280701 31281002 -58223551 - AluSx SINE Alu -11 301 1 418 204 120 56 chr17 31281142 31281358 -58223195 + MER112 DNA MER1_type 29 258 -2 243 238 0 113 chr17 31282210 31282378 -58222175 + L1M4 LINE L1 2512 2660 -3486 1531 148 23 31 chr17 31282553 31282810 -58221743 + AluJo SINE Alu 3 257 -55 252 0 0 0 chr17 31282810 31282838 -58221715 + (T)n Simple_repeat Simple_repeat 1 28 0 276 30 0 0 chr17 31283586 31283619 -58220934 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr17 31283889 31283910 -58220643 + (T)n Simple_repeat Simple_repeat 1 21 0 293 111 37 0 chr17 31285486 31285540 -58219013 + CT-rich Low_complexity Low_complexity 4 59 0 706 204 158 21 chr17 31285558 31285798 -58218755 + Charlie2 DNA MER1_type 89 361 -2421 1007 226 71 38 chr17 31285815 31286143 -58218410 + Charlie2 DNA MER1_type 2239 2588 -274 1830 165 6 22 chr17 31286143 31286458 -58218095 + AluJb SINE Alu 1 310 -2 1007 226 71 38 chr17 31286458 31286581 -58217972 + Charlie2 DNA MER1_type 2588 2705 -157 898 140 0 7 chr17 31286592 31286728 -58217825 + FLAM_C SINE Alu 6 140 -3 398 221 79 14 chr17 31286728 31286868 -58217685 + Charlie2 DNA MER1_type 2714 2862 0 399 43 58 14 chr17 31286897 31286966 -58217587 + (AATAG)n Simple_repeat Simple_repeat 2 73 0 216 184 0 0 chr17 31287496 31287545 -58217008 + A-rich Low_complexity Low_complexity 3 51 0 26 0 0 0 chr17 31287545 31287571 -58216982 + AT_rich Low_complexity Low_complexity 1 26 0 2026 230 42 33 chr17 31287817 31288400 -58216153 - L1MDa LINE L1 -3309 3097 2496 2130 108 3 7 chr17 31288400 31288717 -58215836 + AluSx SINE Alu 1 316 0 2026 230 42 33 chr17 31288717 31288916 -58215637 - L1MDa LINE L1 -3910 2496 2300 1367 218 75 66 chr17 31288936 31289342 -58215211 - L1MDa LINE L1 -4186 2220 1804 2317 77 3 61 chr17 31289342 31289669 -58214884 - AluY SINE Alu -3 308 1 1367 218 75 66 chr17 31289669 31289885 -58214668 - L1MDa LINE L1 -4602 1804 1592 410 138 0 11 chr17 31289904 31289991 -58214562 + (TTCTCC)n Simple_repeat Simple_repeat 6 91 0 1074 140 0 0 chr17 31289999 31290178 -58214375 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1803 165 0 7 chr17 31290193 31290478 -58214075 - AluJb SINE Alu -29 283 1 1251 257 65 44 chr17 31290481 31290976 -58213577 - L1MDa LINE L1 -4815 1591 1075 2209 138 0 0 chr17 31290976 31291287 -58213266 + AluSx SINE Alu 1 311 -1 1251 257 65 44 chr17 31291287 31291495 -58213058 - L1MDa LINE L1 -5331 1075 873 2303 112 3 0 chr17 31291517 31291822 -58212731 + AluSp SINE Alu 1 306 -7 409 257 18 9 chr17 31291848 31291957 -58212596 - L1MDa LINE L1 -5525 884 775 2046 220 82 20 chr17 31292221 31292936 -58211617 + L1ME1 LINE L1 5382 6184 0 343 268 179 12 chr17 31293150 31293318 -58211235 - L1ME LINE L1 -303 5818 5623 2822 77 40 19 chr17 31293715 31294144 -58210409 - MER4C LTR ERV1 0 465 28 408 302 134 65 chr17 31294241 31294791 -58209762 - L1ME LINE L1 -1247 4899 4312 35633 86 6 16 chr17 31295507 31301714 -58202839 - L1PA6 LINE L1 0 6154 11 291 309 10 31 chr17 31302172 31302269 -58202284 + L2 LINE L2 2293 2387 -927 * 2901 219 75 68 chr17 31302266 31302986 -58201567 - L2 LINE L2 -1 3312 2592 2313 76 7 26 chr17 31302986 31303289 -58201264 + AluY SINE Alu 1 297 -14 2901 219 75 68 chr17 31303289 31303759 -58200794 - L2 LINE L2 -721 2592 2127 515 249 319 18 chr17 31303783 31304056 -58200497 + L2 LINE L2 2395 2749 -565 874 137 11 40 chr17 31304125 31304375 -58200178 + L1MB2 LINE L1 5188 5413 -743 2534 150 16 23 chr17 31304375 31304743 -58199810 + L1MB2 LINE L1 5688 6054 -117 2303 68 14 10 chr17 31304743 31305038 -58199515 + AluSp SINE Alu 1 296 -17 2534 150 16 23 chr17 31305038 31305156 -58199397 + L1MB2 LINE L1 6054 6171 0 885 268 75 99 chr17 31305159 31305513 -58199040 + L2 LINE L2 2735 3067 -246 2418 64 0 3 chr17 31305513 31305809 -58198744 + AluSc SINE Alu 1 295 -14 885 268 75 99 chr17 31305809 31306046 -58198507 + L2 LINE L2 3067 3308 -5 464 324 132 53 chr17 31306093 31306815 -58197738 + L2 LINE L2 2258 3059 -213 1628 169 19 8 chr17 31306873 31307134 -58197419 - AluJo SINE Alu -11 301 38 342 130 0 0 chr17 31307134 31307180 -58197373 - L2 LINE L2 -18 3295 3250 331 135 0 0 chr17 31307181 31307233 -58197320 - AluJo SINE Alu -250 52 1 656 153 0 0 chr17 31307240 31307358 -58197195 - L1MB3 LINE L1 0 6183 6066 2130 127 0 3 chr17 31308033 31308333 -58196220 - AluSx SINE Alu -13 299 1 199 273 218 18 chr17 31308356 31308466 -58196087 - MIR3 SINE MIR -10 198 67 681 239 32 0 chr17 31309102 31309257 -58195296 + MIR SINE MIR 103 262 0 22 0 0 0 chr17 31311967 31311989 -58192564 + AT_rich Low_complexity Low_complexity 1 22 0 1348 108 24 14 chr17 31312674 31312887 -58191666 - MER4E LTR ERV1 0 766 552 2073 103 6 40 chr17 31312887 31313236 -58191317 - MER4B LTR ERV1 -273 337 1 2195 132 0 3 chr17 31314065 31314369 -58190184 + AluSx SINE Alu 1 303 -9 2386 83 0 3 chr17 31314611 31314912 -58189641 + AluSg SINE Alu 1 300 -10 2888 167 58 71 chr17 31314920 31315591 -58188962 - LTR8A LTR ERV1 -7 720 58 2284 104 0 3 chr17 31315591 31315889 -58188664 + AluSx SINE Alu 1 297 -15 2888 167 58 71 chr17 31315889 31315947 -58188606 - LTR8A LTR ERV1 -669 58 1 316 204 19 31 chr17 31316438 31316600 -58187953 + CT-rich Low_complexity Low_complexity 2 161 0 1969 142 51 79 chr17 31317074 31317581 -58186972 + L1MB8 LINE L1 5686 6178 0 22 56 0 0 chr17 31317871 31317907 -58186646 + AT_rich Low_complexity Low_complexity 1 36 0 1000 210 81 108 chr17 31318220 31318748 -58185805 - MER34 LTR ERV1 -26 516 3 4291 159 20 44 chr17 31318864 31319359 -58185194 - L1MB5 LINE L1 -54 6120 5615 1834 162 3 17 chr17 31319359 31319649 -58184904 - AluJo SINE Alu -26 286 1 4291 159 20 44 chr17 31319649 31320196 -58184357 - L1MB5 LINE L1 -559 5615 5101 21 71 0 0 chr17 31320589 31320631 -58183922 + AT_rich Low_complexity Low_complexity 1 42 0 526 260 8 0 chr17 31320868 31320995 -58183558 + MER58A DNA MER1_type 2 129 0 332 261 11 11 chr17 31321059 31321151 -58183402 + MER58A DNA MER1_type 127 218 -6 300 179 0 0 chr17 31321212 31321268 -58183285 + L1ME4a LINE L1 6061 6116 -5 1594 179 3 42 chr17 31321317 31321624 -58182929 + AluJo SINE Alu 1 295 -17 1944 194 42 32 chr17 31323912 31324380 -58180173 + L1MB8 LINE L1 4705 5180 -966 2203 167 61 7 chr17 31324380 31324823 -58179730 - MLT1C LTR MaLR 0 467 1 1944 194 42 32 chr17 31324823 31324858 -58179695 + L1MB8 LINE L1 5180 5213 -933 948 178 0 6 chr17 31324858 31325021 -58179532 + FRAM SINE Alu 1 161 -15 4616 141 22 32 chr17 31325022 31326001 -58178552 + L1MB8 LINE L1 5200 6167 -11 1732 181 3 7 chr17 31326095 31326404 -58178149 + AluJb SINE Alu 1 308 -4 1545 200 0 24 chr17 31326525 31326820 -58177733 - AluJo SINE Alu -8 304 17 264 206 163 21 chr17 31327479 31327620 -58176933 - L1MC4a LINE L1 -1675 6133 5973 25 75 0 0 chr17 31327861 31327914 -58176639 + AT_rich Low_complexity Low_complexity 1 53 0 16607 24 0 0 chr17 31328101 31330818 -58173735 - L1PA2 LINE L1 -1 6154 3438 681 260 71 57 chr17 31331724 31332232 -58172321 - L1MC4 LINE L1 -1 8041 7527 1360 137 5 0 chr17 31333209 31333413 -58171140 - AluSg/x SINE Alu -4 306 102 2297 99 0 16 chr17 31333875 31334178 -58170375 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr17 31334213 31334242 -58170311 + AT_rich Low_complexity Low_complexity 1 29 0 7475 32 0 0 chr17 31334870 31336062 -58168491 - L1PA4 LINE L1 0 6155 4960 824 220 13 0 chr17 31336909 31337068 -58167485 + FRAM SINE Alu 1 161 -5 563 238 188 50 chr17 31337152 31337514 -58167039 - MER113 DNA MER1_type? -5 516 105 1602 178 7 27 chr17 31337514 31337807 -58166746 + AluJo SINE Alu 1 287 -25 221 0 0 33 chr17 31337816 31337846 -58166707 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 2109 136 0 10 chr17 31338742 31339052 -58165501 - AluSx SINE Alu -5 307 1 1604 205 17 0 chr17 31339273 31339570 -58164983 + AluJb SINE Alu 5 306 -6 491 261 235 18 chr17 31339692 31339903 -58164650 - MIR SINE MIR 0 262 14 537 249 61 12 chr17 31340007 31340172 -58164381 - MER58A DNA MER1_type -51 173 1 21 0 0 0 chr17 31340253 31340274 -58164279 + AT_rich Low_complexity Low_complexity 1 21 0 380 229 30 70 chr17 31340904 31340966 -58163587 - L1MC4a LINE L1 -1925 5883 5820 2064 128 27 0 chr17 31340966 31341263 -58163290 - AluSx SINE Alu -7 305 1 380 229 30 70 chr17 31341263 31341401 -58163152 - L1MC4a LINE L1 -1988 5820 5691 2351 114 20 6 chr17 31341436 31341786 -58162767 - THE1A LTR MaLR 0 355 1 11859 88 7 1 chr17 31341786 31343356 -58161197 - THE1A-int LTR MaLR 0 1580 1 2605 104 3 0 chr17 31343356 31343710 -58160843 - THE1A LTR MaLR 0 355 1 274 320 165 0 chr17 31344389 31344486 -58160067 - L2 LINE L2 -1 3271 3159 183 129 0 0 chr17 31345064 31345095 -58159458 + (TTG)n Simple_repeat Simple_repeat 3 33 0 2141 129 6 16 chr17 31345254 31345565 -58158988 + AluSx SINE Alu 1 308 -4 2835 143 53 60 chr17 31345696 31346352 -58158201 - L1MB4 LINE L1 -38 6142 5491 1010 211 0 37 chr17 31346358 31346576 -58157977 - AluJb SINE Alu -18 294 85 2285 97 3 16 chr17 31346600 31346911 -58157642 + AluSq SINE Alu 1 307 -6 662 248 13 34 chr17 31346929 31347163 -58157390 - L1MB4 LINE L1 -878 5268 5040 1214 192 58 151 chr17 31347250 31347277 -58157276 - L1MB4 LINE L1 -1092 5054 5026 1970 148 7 3 chr17 31347277 31347581 -58156972 + AluSx SINE Alu 1 305 -7 1214 192 58 151 chr17 31347581 31347923 -58156630 - L1MB4 LINE L1 -1120 5026 4766 2432 46 23 0 chr17 31347923 31348229 -58156324 - L1PA4 LINE L1 -2 6153 5841 1214 192 58 151 chr17 31348229 31348493 -58156060 - L1MB4 LINE L1 -1380 4766 4479 563 286 124 53 chr17 31348973 31349385 -58155168 - L2 LINE L2 -533 2781 2341 276 282 51 51 chr17 31349571 31349688 -58154865 - L2 LINE L2 0 3272 3156 26 0 0 0 chr17 31350092 31350118 -58154435 + AT_rich Low_complexity Low_complexity 1 26 0 928 231 153 31 chr17 31351295 31351344 -58153209 + L2 LINE L2 2954 2996 -317 3697 102 4 4 chr17 31351344 31351855 -58152698 - MER9 LTR ERVK 0 511 1 928 231 153 31 chr17 31351855 31352126 -58152427 + L2 LINE L2 2996 3313 0 293 233 81 47 chr17 31352500 31352586 -58151967 + MIR SINE MIR 6 94 -168 327 282 36 9 chr17 31352691 31352801 -58151752 + L1ME4a LINE L1 5865 5977 -144 1228 144 21 10 chr17 31352801 31352995 -58151558 + AluJb SINE Alu 1 196 -116 300 195 17 102 chr17 31353031 31353149 -58151404 + L1ME4a LINE L1 6009 6116 -5 554 303 81 14 chr17 31357971 31358182 -58146371 + MIR SINE MIR 3 227 -35 246 315 0 0 chr17 31358886 31358975 -58145578 - L1MC4 LINE L1 -1340 6702 6614 429 167 0 0 chr17 31358986 31359064 -58145489 + (TA)n Simple_repeat Simple_repeat 1 78 0 2475 79 0 0 chr17 31359064 31359368 -58145185 - AluSx SINE Alu -8 304 1 24 32 0 0 chr17 31359881 31359912 -58144641 + AT_rich Low_complexity Low_complexity 1 31 0 273 93 0 0 chr17 31360060 31360103 -58144450 - L1MD3 LINE L1 -25 7970 7928 308 256 159 34 chr17 31360470 31360821 -58143732 + L1MEd LINE L1 858 1252 -4867 227 247 0 71 chr17 31360905 31360990 -58143563 + HAL1 LINE L1 1515 1593 -914 22 0 0 0 chr17 31361947 31361969 -58142584 + AT_rich Low_complexity Low_complexity 1 22 0 2463 81 3 7 chr17 31362573 31362882 -58141671 + AluSp SINE Alu 1 308 -5 2251 102 7 3 chr17 31362882 31363185 -58141368 + AluSg SINE Alu 1 305 -5 1963 155 7 0 chr17 31363238 31363529 -58141024 - AluJo SINE Alu -19 293 1 5816 200 210 24 chr17 31363563 31365516 -58139037 + L1MDa LINE L1 21 2337 -4203 2197 71 17 17 chr17 31367250 31367547 -58137006 - AluSc SINE Alu -12 297 1 353 282 203 10 chr17 31367654 31367856 -58136697 - MIR SINE MIR -15 247 7 2338 75 0 33 chr17 31368194 31368500 -58136053 - AluY SINE Alu -15 296 1 685 176 76 0 chr17 31368527 31368658 -58135895 + FLAM_C SINE Alu 1 141 -2 2273 112 0 10 chr17 31368719 31369023 -58135530 + AluSx SINE Alu 3 303 -9 2291 103 3 0 chr17 31369404 31369704 -58134849 - AluSp SINE Alu -12 301 1 875 145 0 0 chr17 31370540 31370671 -58133882 + AluJb SINE Alu 1 131 -181 21 0 0 0 chr17 31370671 31370692 -58133861 + AT_rich Low_complexity Low_complexity 1 21 0 227 246 98 0 chr17 31371274 31371335 -58133218 - MIR SINE MIR -195 67 1 183 80 0 0 chr17 31371812 31371837 -58132716 + (T)n Simple_repeat Simple_repeat 1 25 0 538 233 8 31 chr17 31372028 31372157 -58132396 - L2 LINE L2 0 3313 3188 270 0 0 0 chr17 31373228 31373258 -58131295 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1368 180 9 9 chr17 31373963 31374196 -58130357 - AluJb SINE Alu -14 298 66 251 149 0 21 chr17 31374196 31374243 -58130310 - AluJo/FLAM SINE Alu -190 112 67 548 221 9 9 chr17 31374243 31374356 -58130197 - AluJo/FLAM SINE Alu -199 113 1 2310 96 7 0 chr17 31374432 31374733 -58129820 + AluSq SINE Alu 1 303 -10 333 314 90 33 chr17 31374781 31374928 -58129625 + L1MC4a LINE L1 4023 4160 -1986 2054 104 17 23 chr17 31374928 31375227 -58129326 + AluSq SINE Alu 2 298 -15 333 314 90 33 chr17 31375227 31375567 -58128986 + L1MC4a LINE L1 4160 4538 -1608 537 315 85 48 chr17 31375635 31376095 -58128458 + L1MC4a LINE L1 4626 5102 -1044 437 281 104 28 chr17 31376169 31376457 -58128096 + L1MC4a LINE L1 5314 5623 -2185 2215 111 0 26 chr17 31376460 31376766 -58127787 - AluSg SINE Alu -12 298 1 2462 67 0 0 chr17 31376857 31377156 -58127397 - AluY SINE Alu -12 299 1 2140 122 3 16 chr17 31377226 31377530 -58127023 - AluSx SINE Alu -12 300 1 428 279 35 15 chr17 31377532 31377729 -58126824 + L1MC4a LINE L1 5705 5905 -1903 1956 152 3 3 chr17 31377794 31378091 -58126462 + AluSx SINE Alu 1 297 -15 305 256 139 17 chr17 31379484 31379656 -58124897 - Tigger8 DNA MER2_type -145 521 329 2213 123 0 0 chr17 31380069 31380371 -58124182 + AluSx SINE Alu 1 302 -10 281 302 127 42 chr17 31380445 31380634 -58123919 - MIR SINE MIR -56 206 2 467 192 0 0 chr17 31380702 31380780 -58123773 + AluSg/x SINE Alu 215 292 -17 417 308 16 16 chr17 31380799 31380984 -58123569 + Tigger8 DNA MER2_type 268 452 -214 2101 99 3 23 chr17 31381685 31381989 -58122564 - AluSc SINE Alu -11 298 1 396 276 130 25 chr17 31382386 31382709 -58121844 - L1ME4a LINE L1 -194 5927 5571 207 0 0 0 chr17 31382885 31382908 -58121645 + (CA)n Simple_repeat Simple_repeat 2 24 0 1963 164 0 0 chr17 31383299 31383598 -58120955 - AluSx SINE Alu -11 301 3 1742 80 0 0 chr17 31383687 31383900 -58120653 + AluSg/x SINE Alu 88 300 -10 324 333 130 36 chr17 31384369 31384754 -58119799 + L2 LINE L2 987 1407 -1907 293 299 135 29 chr17 31384939 31385213 -58119340 + L2 LINE L2 1791 2093 -1221 348 256 78 0 chr17 31385215 31385305 -58119248 - MER117 DNA MER1_type -97 100 4 653 202 0 0 chr17 31385828 31385947 -58118606 + FLAM_A SINE Alu 20 138 -4 362 277 114 36 chr17 31386059 31386279 -58118274 + MIR SINE MIR 3 239 -23 2073 134 3 0 chr17 31386469 31386767 -58117786 + AluSx SINE Alu 1 299 -13 395 297 27 138 chr17 31386953 31387286 -58117267 - L2 LINE L2 -9 3263 2968 2910 219 54 27 chr17 31387544 31388035 -58116518 - L1ME1 LINE L1 -5 6161 5638 2443 81 0 0 chr17 31388035 31388333 -58116220 - AluY SINE Alu -13 298 1 2910 219 54 27 chr17 31388333 31388631 -58115922 - L1ME1 LINE L1 -528 5638 5350 2235 210 47 82 chr17 31388653 31389548 -58115005 - L1ME1 LINE L1 -768 5378 4515 * 4481 163 80 24 chr17 31389543 31389574 -58114979 + L1MC2 LINE L1 5249 5277 -1067 2739 7 0 0 chr17 31389574 31389872 -58114681 - AluYa5 SINE Alu -13 298 1 4481 163 80 24 chr17 31389872 31390177 -58114376 + L1MC2 LINE L1 5277 5564 -780 2381 97 0 0 chr17 31390177 31390486 -58114067 - AluSg1 SINE Alu 0 309 1 4481 163 80 24 chr17 31390486 31391198 -58113355 + L1MC2 LINE L1 5564 6344 0 278 213 40 0 chr17 31391737 31391812 -58112741 + (TTTA)n Simple_repeat Simple_repeat 3 80 0 2331 97 0 0 chr17 31392719 31393019 -58111534 - AluSx SINE Alu -12 300 1 351 159 0 0 chr17 31393886 31393955 -58110598 - L1MD1 LINE L1 -11 6231 6163 829 173 20 7 chr17 31393955 31394105 -58110448 + FRAM SINE Alu 10 161 -15 11329 125 39 23 chr17 31394130 31394420 -58110133 + Tigger1 DNA MER2_type 1 285 -2133 1781 172 3 13 chr17 31394420 31394722 -58109831 - AluJb SINE Alu -13 299 1 11329 125 39 23 chr17 31394722 31396125 -58108428 + Tigger1 DNA MER2_type 285 1732 -686 2145 125 0 26 chr17 31396125 31396436 -58108117 + AluSx SINE Alu 1 303 -9 11329 125 39 23 chr17 31396436 31396738 -58107815 + Tigger1 DNA MER2_type 1732 2028 -390 355 281 41 41 chr17 31396740 31396886 -58107667 + MIR SINE MIR 117 262 0 595 245 153 10 chr17 31397413 31397609 -58106944 - MIR SINE MIR -2 260 37 2252 85 3 3 chr17 31397673 31397967 -58106586 - AluSg SINE Alu -16 294 1 977 107 0 8 chr17 31397970 31398101 -58106452 - AluSg SINE Alu -180 130 1 2031 130 0 10 chr17 31398774 31399066 -58105487 - AluSx SINE Alu -23 289 1 1994 159 0 0 chr17 31399124 31399420 -58105133 + AluSx SINE Alu 1 296 -16 469 260 87 109 chr17 31400206 31400225 -58104328 - MIR SINE MIR -1 261 243 2146 117 0 3 chr17 31400225 31400523 -58104030 - AluSq SINE Alu -16 297 1 469 260 87 109 chr17 31400523 31400768 -58103785 - MIR SINE MIR -19 243 3 207 333 46 52 chr17 31400782 31400956 -58103597 + MIR SINE MIR 20 192 -70 351 202 43 0 chr17 31401031 31401125 -58103428 - L1MC4 LINE L1 0 8042 7945 1235 221 39 7 chr17 31402361 31402641 -58101912 + AluJo SINE Alu 1 289 -23 1036 267 214 34 chr17 31402915 31403828 -58100725 - HAL1 LINE L1 -623 1884 808 1012 156 0 75 chr17 31403854 31404040 -58100513 - AluJb SINE Alu -46 266 95 249 299 81 17 chr17 31404192 31404366 -58100187 - HAL1 LINE L1 -2065 442 258 2586 49 0 0 chr17 31404881 31405187 -58099366 + AluY SINE Alu 1 306 -5 2114 113 3 7 chr17 31405407 31405707 -58098846 - AluSx SINE Alu -13 299 1 335 179 30 0 chr17 31406360 31406427 -58098126 - Tigger4(Zombi) DNA MER2_type 0 2731 2663 260 83 0 0 chr17 31406407 31406443 -58098110 - Tigger4(Zombi) DNA MER2_type -2695 36 1 * 22 35 0 0 chr17 31407126 31407155 -58097398 + AT_rich Low_complexity Low_complexity 1 29 0 1666 153 3 48 chr17 31407339 31407634 -58096919 + AluJo SINE Alu 1 282 -30 1770 161 26 19 chr17 31407739 31408049 -58096504 - AluJb SINE Alu 0 312 1 25 65 0 0 chr17 31408192 31408238 -58096315 + AT_rich Low_complexity Low_complexity 1 46 0 2157 133 0 13 chr17 31409860 31410175 -58094378 - AluJb SINE Alu -1 311 1 25 0 0 0 chr17 31411332 31411357 -58093196 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr17 31411552 31411574 -58092979 + (TCTCCC)n Simple_repeat Simple_repeat 1 22 0 8897 44 60 106 chr17 31411582 31412976 -58091577 + SVA Other Other 48 1377 -9 866 150 0 0 chr17 31415115 31415242 -58089311 + FLAM_C SINE Alu 1 127 -6 1792 148 32 3 chr17 31415827 31416110 -58088443 + AluJo SINE Alu 1 291 -21 248 154 96 0 chr17 31416136 31416188 -58088365 - L1MB7 LINE L1 -74 6110 6054 335 186 57 0 chr17 31416519 31416589 -58087964 + MER5A DNA MER1_type 115 188 -1 876 307 20 3 chr17 31416608 31416914 -58087639 - L1ME LINE L1 -379 5791 5481 2133 279 51 24 chr17 31416916 31417107 -58087446 - L1ME LINE L1 -744 5402 5218 1950 120 35 60 chr17 31417107 31417423 -58087130 - AluSg SINE Alu -2 308 1 1855 110 68 74 chr17 31417427 31417736 -58086817 - AluSg SINE Alu -3 307 1 2133 279 51 24 chr17 31417736 31418441 -58086112 - L1ME LINE L1 -930 5216 4485 407 261 92 7 chr17 31418795 31418948 -58085605 + MIR3 SINE MIR 26 191 -17 203 315 11 11 chr17 31419424 31419513 -58085040 + L2 LINE L2 1932 2020 -1294 291 176 81 0 chr17 31420307 31420381 -58084172 - L1MD1 LINE L1 -4 6238 6159 2114 146 85 15 chr17 31420573 31420971 -58083582 + MSTB LTR MaLR 1 426 0 194 370 0 31 chr17 31421456 31421583 -58082970 - L2 LINE L2 -907 2407 2285 245 279 58 0 chr17 31421955 31422041 -58082512 + MIR SINE MIR 101 191 -71 1534 187 13 26 chr17 31422435 31422740 -58081813 - AluJo SINE Alu -11 301 1 290 317 66 44 chr17 31423094 31423321 -58081232 - MIR SINE MIR 0 262 31 5378 40 5 8 chr17 31425191 31425838 -58078715 - SVA Other Other -9 1377 733 805 131 0 22 chr17 31425840 31425977 -58078576 - AluSg1 SINE Alu 0 312 179 746 93 0 0 chr17 31425978 31426075 -58078478 - AluSg1 SINE Alu -211 98 2 6293 90 19 2 chr17 31426303 31427535 -58077018 - L1PA13 LINE L1 0 6163 4912 189 0 0 0 chr17 31427597 31427618 -58076935 + (TTTTTA)n Simple_repeat Simple_repeat 3 23 0 309 241 28 0 chr17 31428224 31428304 -58076249 + MIR SINE MIR 70 152 -56 182 296 46 37 chr17 31428494 31428602 -58075951 + MIR3 SINE MIR 100 208 0 2256 269 71 21 chr17 31428703 31429322 -58075231 - L1ME3A LINE L1 -9 6161 5490 2014 122 0 7 chr17 31429322 31429632 -58074921 - AluSx SINE Alu 0 308 1 2256 269 71 21 chr17 31429632 31429814 -58074739 - L1ME3A LINE L1 -680 5490 5319 430 281 62 0 chr17 31429966 31430112 -58074441 - MIR SINE MIR -94 168 14 429 236 88 60 chr17 31430186 31430402 -58074151 + L2 LINE L2 3092 3313 0 343 314 102 24 chr17 31431482 31431864 -58072689 - L1ME3A LINE L1 -1168 4978 4567 206 62 31 0 chr17 31431960 31431992 -58072561 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 500 200 56 8 chr17 31432165 31432290 -58072263 - MER2 DNA MER2_type -25 320 190 11613 153 68 11 chr17 31432293 31434407 -58070146 + Tigger1 DNA MER2_type 3 2236 -182 262 155 0 17 chr17 31434408 31434466 -58070087 - L1PA16 LINE L1 -12 6154 6098 4445 160 14 59 chr17 31434467 31435599 -58068954 - L1PA16 LINE L1 -105 6061 5005 531 241 76 7 chr17 31435599 31435744 -58068809 + MLT1I LTR MaLR 57 211 -198 2055 180 13 13 chr17 31435773 31436157 -58068396 + MLT1B LTR MaLR 1 384 -6 560 164 112 0 chr17 31436166 31436282 -58068271 + MLT1B-int LTR MaLR 3 131 -1240 3873 205 95 71 chr17 31436528 31437674 -58066879 - MLT-int LTR MaLR -316 1419 246 902 187 22 11 chr17 31437705 31437887 -58066666 + MLT1C LTR MaLR 284 467 0 3243 116 8 8 chr17 31438076 31438560 -58065993 + MER1A DNA MER1_type 46 529 0 363 277 0 0 chr17 31438761 31438898 -58065655 + (CA)n Simple_repeat Simple_repeat 1 137 0 1596 149 111 32 chr17 31440046 31440388 -58064165 + THE1C LTR MaLR 7 375 0 300 143 11 143 chr17 31440899 31440990 -58063563 - SN5 Other centromeric -77 378 300 193 269 13 77 chr17 31440996 31441074 -58063479 - MIR SINE MIR -91 171 99 2168 109 0 0 chr17 31443190 31443493 -58061060 + AluY SINE Alu 1 303 -8 1141 303 40 31 chr17 31446090 31446770 -58057783 + L1MC3 LINE L1 5479 6164 -1621 7442 37 9 0 chr17 31449944 31451600 -58052953 - L1PA5 LINE L1 0 6154 4499 5049 131 8 4 chr17 31452153 31452925 -58051628 - LTR5 LTR ERVK -193 776 2 411 266 65 0 chr17 31454308 31454432 -58050121 + MIR SINE MIR 88 219 -43 263 289 111 33 chr17 31454457 31454637 -58049916 - L2 LINE L2 -12 3301 3108 256 351 36 26 chr17 31463345 31463650 -58040903 + L2 LINE L2 2498 2805 -509 2857 186 51 10 chr17 31463840 31464433 -58040120 + L1PB4 LINE L1 5540 6156 0 418 294 118 45 chr17 31465693 31466010 -58038543 - L1 LINE L1 -753 5393 4228 225 174 0 0 chr17 31466022 31466068 -58038485 + (CTTA)n Simple_repeat Simple_repeat 1 46 0 688 307 110 63 chr17 31467496 31467985 -58036568 - L1M4 LINE L1 -1653 4493 3982 950 100 0 0 chr17 31467987 31468117 -58036436 - AluSp/q SINE Alu -18 295 166 852 114 0 0 chr17 31468306 31468429 -58036124 + FRAM SINE Alu 46 168 -8 5612 132 21 5 chr17 31469309 31470424 -58034129 - L1PA16 LINE L1 -16 6150 5015 2333 57 3 17 chr17 31470426 31470726 -58033827 - AluY SINE Alu -15 296 1 343 195 85 0 chr17 31470882 31470964 -58033589 - L2 LINE L2 0 3313 3225 576 121 0 0 chr17 31471006 31471089 -58033464 + 5S rRNA rRNA 7 89 -32 3885 259 116 31 chr17 31471093 31471224 -58033329 - L2 LINE L2 -90 3223 3105 2239 107 0 16 chr17 31471224 31471534 -58033019 - AluSx SINE Alu -7 305 1 3885 259 116 31 chr17 31471534 31472275 -58032278 - L2 LINE L2 -208 3105 2428 2317 87 0 13 chr17 31472275 31472575 -58031978 + AluY SINE Alu 1 296 -15 3885 259 116 31 chr17 31472575 31472679 -58031874 - L2 LINE L2 -885 2428 2334 2156 103 7 3 chr17 31472679 31472969 -58031584 + AluSg SINE Alu 1 291 -19 3885 259 116 31 chr17 31472969 31473089 -58031464 - L2 LINE L2 -979 2334 2226 1959 145 17 0 chr17 31473089 31473385 -58031168 - AluJb SINE Alu -11 301 1 3885 259 116 31 chr17 31473385 31474187 -58030366 - L2 LINE L2 -1087 2226 1152 2314 103 0 0 chr17 31474249 31474550 -58030003 + AluSx SINE Alu 1 301 -11 1279 117 0 0 chr17 31474663 31474843 -58029710 - AluSg/x SINE Alu -12 300 121 299 106 0 0 chr17 31474846 31474893 -58029660 - Alu SINE Alu 0 300 254 1625 169 3 14 chr17 31474893 31475183 -58029370 + AluJb SINE Alu 9 295 -17 385 203 30 54 chr17 31475365 31475423 -58029130 - MLT1G LTR MaLR -5 585 527 2143 95 10 20 chr17 31475423 31475718 -58028835 + AluSx SINE Alu 1 292 -20 385 203 30 54 chr17 31475718 31475878 -58028675 - MLT1G LTR MaLR -63 527 306 1406 189 20 122 chr17 31475964 31476423 -58028130 + MLT2D LTR ERVL 1 412 -2 2386 88 0 3 chr17 31476424 31476721 -58027832 - AluSc SINE Alu -13 296 1 570 273 53 47 chr17 31476778 31477097 -58027456 - L1M4 LINE L1 -1953 4193 3873 1765 107 8 0 chr17 31477421 31477663 -58026890 - AluSp SINE Alu 0 313 70 1151 133 28 19 chr17 31477663 31477874 -58026679 - LTR7 LTR ERV1 0 450 238 385 111 0 32 chr17 31477944 31478007 -58026546 - LTR7 LTR ERV1 -389 61 1 632 190 81 81 chr17 31478222 31478356 -58026197 + MER2 DNA MER2_type 1 137 -208 1307 178 148 19 chr17 31478356 31478620 -58025933 - AluJo SINE Alu -4 298 1 632 190 81 81 chr17 31478620 31478696 -58025857 + MER2 DNA MER2_type 136 211 -134 996 187 89 9 chr17 31478940 31479154 -58025399 + AluJo SINE Alu 82 312 0 235 241 0 13 chr17 31479155 31479234 -58025319 + L1M4 LINE L1 4146 4223 -1923 230 147 0 0 chr17 31479314 31479348 -58025205 + Alu SINE Alu 252 285 -17 2356 101 0 19 chr17 31479399 31479717 -58024836 - AluSq SINE Alu -1 312 1 204 283 40 20 chr17 31479743 31479842 -58024711 - MER5A DNA MER1_type -85 104 4 225 306 38 82 chr17 31479848 31480031 -58024522 - L3 LINE CR1 -160 1417 1243 1865 130 63 7 chr17 31480050 31480335 -58024218 - AluSx SINE Alu -11 301 1 365 279 19 51 chr17 31480497 31480562 -58023991 - L1ME4a LINE L1 -14 6107 6041 1923 134 34 10 chr17 31480562 31480853 -58023700 + AluSx SINE Alu 2 299 -13 365 279 19 51 chr17 31480853 31480945 -58023608 - L1ME4a LINE L1 -80 6041 5955 460 207 60 9 chr17 31480984 31481100 -58023453 - L1ME4a LINE L1 -22 6099 5978 2269 112 6 6 chr17 31481115 31481427 -58023126 + AluSx SINE Alu 1 312 0 1258 238 72 83 chr17 31481438 31481702 -58022851 + L1M4 LINE L1 3312 3577 -2569 2141 108 0 3 chr17 31481702 31481988 -58022565 + AluSc SINE Alu 2 286 -23 1258 238 72 83 chr17 31481988 31482373 -58022180 + L1M4 LINE L1 3577 3955 -2191 2020 105 0 89 chr17 31482373 31482535 -58022018 + AluSg SINE Alu 1 121 -189 2478 71 0 43 chr17 31482535 31482859 -58021694 + AluY SINE Alu 1 310 -1 2020 105 0 89 chr17 31482859 31483020 -58021533 + AluSg SINE Alu 121 295 -15 1258 238 72 83 chr17 31483020 31483100 -58021453 + L1M4 LINE L1 3955 4034 -2112 285 125 0 0 chr17 31483100 31483140 -58021413 - Alu SINE Alu -263 40 1 351 143 32 0 chr17 31483143 31483206 -58021347 - AluJb SINE Alu 0 302 238 4263 159 25 52 chr17 31483214 31484107 -58020446 - LTR5 LTR ERVK 0 969 101 8608 60 6 19 chr17 31484109 31484961 -58019592 - MER11C LTR ERVK -2 1069 232 2560 71 0 0 chr17 31484961 31485272 -58019281 + AluY SINE Alu 1 311 0 8608 60 6 19 chr17 31485272 31485502 -58019051 - MER11C LTR ERVK -839 232 1 579 106 0 138 chr17 31485502 31485547 -58019006 - LTR5 LTR ERVK -863 106 56 185 0 40 0 chr17 31485547 31485572 -58018981 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 7734 24 0 0 chr17 31485572 31486575 -58017978 - L1PA3 LINE L1 -13 6142 5141 579 106 0 138 chr17 31486575 31486651 -58017902 - LTR5 LTR ERVK -911 58 1 1504 180 33 4 chr17 31486651 31486895 -58017658 - AluJb SINE Alu -61 251 1 1882 111 18 90 chr17 31487375 31487709 -58016844 - AluSx SINE Alu -2 310 1 1493 142 25 82 chr17 31488211 31488528 -58016025 + AluJb SINE Alu 1 299 -13 22 35 0 0 chr17 31489129 31489158 -58015395 + GC_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17 31489598 31489633 -58014920 + GC_rich Low_complexity Low_complexity 1 35 0 420 67 0 0 chr17 31492294 31492354 -58012199 + (CA)n Simple_repeat Simple_repeat 2 61 0 2098 80 25 0 chr17 31493130 31493426 -58011127 - AluY SINE Alu 0 303 1 1251 259 93 56 chr17 31493597 31494245 -58010308 - HAL1 LINE L1 -312 2195 1524 478 140 0 105 chr17 31494255 31494369 -58010184 - Charlie5 DNA MER1_type -32 2580 2479 600 178 9 0 chr17 31494370 31494477 -58010076 + FLAM_A SINE Alu 2 109 -33 509 167 54 152 chr17 31494531 31494789 -58009764 - MER33 DNA MER1_type -249 75 1 621 192 28 22 chr17 31494841 31494995 -58009558 - L1P1 LINE L1 -637 5518 5357 474 215 31 54 chr17 31495883 31496013 -58008540 - MLT1K LTR MaLR -15 573 447 2376 41 3 31 chr17 31496535 31496850 -58007703 - AluY SINE Alu 0 307 1 21 57 0 0 chr17 31496986 31497021 -58007532 + AT_rich Low_complexity Low_complexity 1 35 0 300 53 0 0 chr17 31497372 31497410 -58007143 + (TG)n Simple_repeat Simple_repeat 1 38 0 249 211 0 0 chr17 31497411 31497463 -58007090 + L1MC4 LINE L1 6652 6703 -1339 192 174 130 0 chr17 31498554 31498600 -58005953 - MIR SINE MIR -5 257 206 197 182 91 18 chr17 31498895 31498950 -58005603 - L2 LINE L2 -8 3305 3247 205 308 162 0 chr17 31499089 31499206 -58005347 - MIR SINE MIR -79 183 48 330 233 196 31 chr17 31499284 31499447 -58005106 - MIR SINE MIR 0 262 73 2285 110 3 3 chr17 31500349 31500659 -58003894 + AluSq SINE Alu 1 310 -3 2940 103 15 8 chr17 31500859 31501347 -58003206 - MER1A DNA MER1_type 0 529 1 2296 113 7 0 chr17 31501600 31501909 -58002644 + AluSp SINE Alu 1 311 -2 203 184 0 0 chr17 31501958 31501996 -58002557 + (TA)n Simple_repeat Simple_repeat 1 38 0 23 68 0 0 chr17 31502222 31502266 -58002287 + AT_rich Low_complexity Low_complexity 1 44 0 282 87 0 0 chr17 31502351 31502397 -58002156 + (TA)n Simple_repeat Simple_repeat 1 46 0 2544 76 0 13 chr17 31502399 31502715 -58001838 - AluSp SINE Alu -1 312 1 22 0 0 0 chr17 31502761 31502783 -58001770 + AT_rich Low_complexity Low_complexity 1 22 0 326 127 6 45 chr17 31502920 31502991 -58001562 + FAM SINE Alu 29 91 -84 248 302 22 62 chr17 31503686 31503865 -58000688 - MIR3 SINE MIR 0 208 37 2062 136 3 0 chr17 31503988 31504282 -58000271 - AluSc SINE Alu -14 295 1 485 76 59 0 chr17 31504782 31504900 -57999653 + (TA)n Simple_repeat Simple_repeat 1 125 0 222 91 0 0 chr17 31505642 31505675 -57998878 + (A)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr17 31506015 31506037 -57998516 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 26 50 0 0 chr17 31506371 31506411 -57998142 + AT_rich Low_complexity Low_complexity 1 40 0 1681 219 148 28 chr17 31507029 31507359 -57997194 + L1MC4 LINE L1 6960 7249 -793 1685 166 13 46 chr17 31507359 31507666 -57996887 - AluJb SINE Alu -14 298 2 1681 219 148 28 chr17 31507666 31507971 -57996582 + L1MC4 LINE L1 7249 7671 -371 689 225 193 0 chr17 31508141 31508359 -57996194 + MIR SINE MIR 2 261 -1 1950 139 4 0 chr17 31508692 31508973 -57995580 - AluJb SINE Alu -17 295 14 843 273 83 16 chr17 31509068 31509431 -57995122 - L1MC4 LINE L1 -43 7999 7613 1286 98 0 0 chr17 31510648 31510821 -57993732 + AluY SINE Alu 125 297 -14 1192 160 26 120 chr17 31510821 31510858 -57993695 - L1M4 LINE L1 -866 5280 5241 1921 143 9 19 chr17 31510858 31511173 -57993380 + AluJb SINE Alu 1 312 0 1192 160 26 120 chr17 31511173 31511254 -57993299 - L1M4 LINE L1 -905 5241 5154 2085 148 0 3 chr17 31511254 31511565 -57992988 + AluSx SINE Alu 1 310 -2 1192 160 26 120 chr17 31511565 31511795 -57992758 - L1M4 LINE L1 -992 5154 4964 767 192 0 0 chr17 31511825 31511955 -57992598 - FLAM_C SINE Alu -12 131 2 223 178 0 0 chr17 31511961 31512006 -57992547 + (TA)n Simple_repeat Simple_repeat 2 46 0 965 170 0 0 chr17 31512011 31512164 -57992389 + AluJb SINE Alu 138 290 -22 853 80 0 43 chr17 31512164 31512352 -57992201 + (TA)n Simple_repeat Simple_repeat 1 180 0 843 273 83 16 chr17 31515581 31515944 -57988609 + L1MC4 LINE L1 7613 7999 -43 1950 139 4 0 chr17 31516039 31516320 -57988233 + AluJb SINE Alu 14 295 -17 689 225 193 0 chr17 31516653 31516871 -57987682 - MIR SINE MIR -1 261 2 1681 219 148 28 chr17 31517041 31517346 -57987207 - L1MC4 LINE L1 -371 7671 7404 1685 166 13 46 chr17 31517346 31517653 -57986900 + AluJb SINE Alu 2 298 -14 1681 219 148 28 chr17 31517653 31517983 -57986570 - L1MC4 LINE L1 -638 7404 6960 26 50 0 0 chr17 31518601 31518641 -57985912 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 31518975 31518997 -57985556 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 213 94 0 0 chr17 31519337 31519369 -57985184 + (T)n Simple_repeat Simple_repeat 1 32 0 2148 143 0 3 chr17 31522351 31522659 -57981894 + AluJb SINE Alu 1 307 -5 225 94 0 0 chr17 31522730 31522762 -57981791 + (T)n Simple_repeat Simple_repeat 1 32 0 2202 104 17 0 chr17 31523961 31524258 -57980295 + AluY SINE Alu 1 302 -9 832 127 0 0 chr17 31524342 31524452 -57980101 + AluJb SINE Alu 178 287 -25 632 278 51 68 chr17 31524463 31524930 -57979623 - L1M4 LINE L1 -1529 4617 4159 1095 172 91 10 chr17 31524931 31525140 -57979413 - AluJo SINE Alu -5 307 82 532 248 37 51 chr17 31525366 31525442 -57979111 - MER2 DNA MER2_type -134 211 135 1174 190 145 22 chr17 31525442 31525711 -57978842 + AluJo SINE Alu 1 302 0 532 248 37 51 chr17 31525711 31525848 -57978705 - MER2 DNA MER2_type -210 135 1 1384 168 8 120 chr17 31526380 31526731 -57977822 + AluJb SINE Alu 1 312 0 806 189 0 20 chr17 31526741 31526889 -57977664 - FRAM SINE Alu -21 155 11 2091 148 3 0 chr17 31526901 31527204 -57977349 - AluJb SINE Alu -8 304 1 222 37 0 0 chr17 31527299 31527326 -57977227 + (GA)n Simple_repeat Simple_repeat 2 28 0 189 0 0 0 chr17 31527413 31527434 -57977119 + (TG)n Simple_repeat Simple_repeat 2 22 0 1139 157 73 70 chr17 31527472 31527758 -57976795 - L1MB7 LINE L1 -16 6168 5882 1892 154 14 7 chr17 31527836 31528122 -57976431 - AluJb SINE Alu -24 288 1 2536 172 44 2 chr17 31528125 31528602 -57975951 - L1MB3 LINE L1 -44 6139 5643 1966 81 0 0 chr17 31528604 31528839 -57975714 - AluSq SINE Alu -78 235 1 226 286 0 0 chr17 31528842 31528898 -57975655 - MER66B LTR ERV1 -430 56 1 403 190 9 86 chr17 31528898 31529014 -57975539 - AluJb SINE Alu -119 193 87 465 288 52 2 chr17 31529053 31529293 -57975260 + MLT1J2 LTR MaLR 125 419 -31 451 258 106 71 chr17 31529344 31529359 -57975194 - MIR SINE MIR -57 205 192 1524 157 122 16 chr17 31529359 31529614 -57974939 - AluJo SINE Alu -30 282 1 451 258 106 71 chr17 31529614 31529670 -57974883 - MIR SINE MIR -70 192 139 1667 145 0 52 chr17 31529670 31529939 -57974614 - AluSx SINE Alu -21 291 37 451 258 106 71 chr17 31529939 31530064 -57974489 - MIR SINE MIR -123 139 1 196 293 13 40 chr17 31530266 31530341 -57974212 + MIR SINE MIR 190 262 0 768 218 93 35 chr17 31530360 31530563 -57973990 + MIR SINE MIR 10 229 -33 21 0 0 0 chr17 31531072 31531093 -57973460 + AT_rich Low_complexity Low_complexity 1 21 0 778 112 0 77 chr17 31531545 31531688 -57972865 + FLAM_C SINE Alu 1 132 -1 2440 107 0 0 chr17 31531775 31532117 -57972436 + AluSx SINE Alu 1 342 0 554 291 29 8 chr17 31532254 31532498 -57972055 - L2 LINE L2 -258 3055 2807 2353 94 13 0 chr17 31532502 31532809 -57971744 + AluSx SINE Alu 2 312 0 2190 113 10 13 chr17 31533057 31533367 -57971186 + AluSx SINE Alu 1 309 -3 1066 238 151 48 chr17 31533367 31533830 -57970723 - MLT1H LTR MaLR -17 532 22 2497 51 3 0 chr17 31533949 31534241 -57970312 - AluY SINE Alu -18 293 1 312 27 0 0 chr17 31535237 31535274 -57969279 + (T)n Simple_repeat Simple_repeat 1 37 0 332 278 183 0 chr17 31536012 31536138 -57968415 + MER91A DNA MER1_type 1 149 -47 2254 99 3 0 chr17 31536138 31536458 -57968095 - AluSq SINE Alu 0 322 2 679 146 54 8 chr17 31536491 31536621 -57967932 + AluJ SINE Alu 2 137 -175 1913 149 31 0 chr17 31536635 31536924 -57967629 + AluJb SINE Alu 1 298 -14 741 268 160 26 chr17 31537091 31537434 -57967119 - L2 LINE L2 0 3313 2925 1014 192 0 12 chr17 31537523 31537690 -57966863 + AluJ SINE Alu 138 302 -10 2454 73 3 7 chr17 31537699 31538000 -57966553 + AluSg SINE Alu 1 300 -10 355 278 117 61 chr17 31538159 31538243 -57966310 - MIR SINE MIR -26 236 158 2271 112 0 0 chr17 31538243 31538537 -57966016 - AluSx SINE Alu -18 294 1 355 278 117 61 chr17 31538537 31538632 -57965921 - MIR SINE MIR -104 158 47 2194 118 0 0 chr17 31539341 31539637 -57964916 - AluSx SINE Alu -16 296 1 1242 237 219 17 chr17 31539885 31540361 -57964192 - MLT1E2 LTR MaLR 0 626 55 945 269 44 62 chr17 31540722 31540948 -57963605 + L2 LINE L2 2872 3101 -212 2027 135 3 0 chr17 31540948 31541230 -57963323 - AluSx SINE Alu -14 298 16 945 269 44 62 chr17 31541230 31541431 -57963122 + L2 LINE L2 3101 3293 -20 1873 153 14 3 chr17 31541431 31541725 -57962828 + AluSx SINE Alu 1 297 -15 945 269 44 62 chr17 31541725 31541746 -57962807 + L2 LINE L2 3293 3313 0 911 228 149 94 chr17 31542264 31542350 -57962203 + MLT1D LTR MaLR 1 81 -424 2338 97 3 0 chr17 31542350 31542648 -57961905 - AluSq SINE Alu -14 299 1 1859 173 0 13 chr17 31542651 31542952 -57961601 - AluJb SINE Alu -15 297 1 911 228 149 94 chr17 31542952 31542977 -57961576 + MLT1D LTR MaLR 82 104 -401 1837 137 29 177 chr17 31542977 31543116 -57961437 - LTR26B LTR ERV1 0 531 373 2189 126 7 16 chr17 31543116 31543426 -57961127 + AluSx SINE Alu 5 311 -1 1837 137 29 177 chr17 31543426 31543711 -57960842 - LTR26B LTR ERV1 -158 373 47 2430 97 7 0 chr17 31543711 31544021 -57960532 + AluSx SINE Alu 1 312 0 1837 137 29 177 chr17 31544021 31544073 -57960480 - LTR26B LTR ERV1 -484 47 163 2432 90 0 0 chr17 31544073 31544374 -57960179 - AluSp SINE Alu -10 303 3 1837 137 29 177 chr17 31544374 31544516 -57960037 - LTR26B LTR ERV1 -367 164 3 911 228 149 94 chr17 31544516 31544869 -57959684 + MLT1D LTR MaLR 104 496 -9 847 125 0 23 chr17 31544970 31545098 -57959455 - AluSg/x SINE Alu -4 308 184 1570 124 22 91 chr17 31545098 31545373 -57959180 + AluSx SINE Alu 44 299 -13 1157 75 0 0 chr17 31545373 31545507 -57959046 + AluSg SINE Alu 1 134 -176 2194 104 0 30 chr17 31545507 31545804 -57958749 + AluY SINE Alu 1 288 -23 2970 152 44 46 chr17 31545809 31546271 -57958282 + L1MA7 LINE L1 5635 6096 -195 2391 104 0 0 chr17 31546271 31546578 -57957975 - AluSg1 SINE Alu -2 307 1 2970 152 44 46 chr17 31546578 31546634 -57957919 + L1MA7 LINE L1 6096 6151 -140 728 178 0 8 chr17 31546634 31546763 -57957790 + FLAM_C SINE Alu 1 128 -5 2970 152 44 46 chr17 31546763 31546901 -57957652 + L1MA7 LINE L1 6151 6291 0 2117 120 11 0 chr17 31546917 31547200 -57957353 + AluSx SINE Alu 11 296 -16 2018 110 67 0 chr17 31547202 31547484 -57957069 + AluSg SINE Alu 1 301 -9 568 182 36 18 chr17 31547484 31547566 -57956987 + GA-rich Low_complexity Low_complexity 1 80 -88 2464 65 0 49 chr17 31547566 31547891 -57956662 + AluY SINE Alu 1 309 -2 568 182 36 18 chr17 31547891 31547973 -57956580 + GA-rich Low_complexity Low_complexity 80 168 0 2164 130 0 3 chr17 31548302 31548595 -57955958 + AluSx SINE Alu 1 292 -20 478 179 259 0 chr17 31548606 31548718 -57955835 + AluJo SINE Alu 3 143 -169 399 247 34 62 chr17 31548718 31548764 -57955789 - MLT1G1 LTR MaLR -451 144 98 2049 128 152 11 chr17 31548764 31549139 -57955414 + MSTA LTR MaLR 1 428 0 399 247 34 62 chr17 31549139 31549238 -57955315 - MLT1G1 LTR MaLR -497 98 3 510 221 0 33 chr17 31549238 31549360 -57955193 + LTR16C LTR ERVL 374 491 0 2163 128 28 75 chr17 31549530 31549561 -57954992 - MSTA LTR MaLR -20 408 377 2277 106 0 0 chr17 31549561 31549881 -57954672 - AluSx SINE Alu 0 320 1 2163 128 28 75 chr17 31549881 31550097 -57954456 - MSTA LTR MaLR -51 377 185 2185 134 0 7 chr17 31550097 31550403 -57954150 + AluSx SINE Alu 1 304 -8 2163 128 28 75 chr17 31550403 31550580 -57953973 - MSTA LTR MaLR -243 185 1 2443 72 0 3 chr17 31550668 31550961 -57953592 + AluY SINE Alu 1 292 -19 266 271 43 0 chr17 31551228 31551298 -57953255 + MIR SINE MIR 118 190 -72 673 144 0 32 chr17 31551301 31551426 -57953127 - FLAM_C SINE Alu 0 143 23 2179 120 23 19 chr17 31551458 31551593 -57952960 + AluSq SINE Alu 2 135 -178 2625 64 0 0 chr17 31551593 31551904 -57952649 + AluY SINE Alu 1 311 0 2179 120 23 19 chr17 31551904 31552076 -57952477 + AluSq SINE Alu 135 310 -3 401 304 24 8 chr17 31552079 31552204 -57952349 - MIR SINE MIR -13 249 123 1876 176 0 26 chr17 31552977 31553289 -57951264 - AluJo SINE Alu -7 305 2 2002 138 0 46 chr17 31553293 31553474 -57951079 - AluSx SINE Alu 0 312 151 2177 103 21 3 chr17 31553474 31553764 -57950789 - AluSg SINE Alu -15 295 1 2002 138 0 46 chr17 31553764 31553909 -57950644 - AluSx SINE Alu -161 151 1 808 154 0 22 chr17 31553912 31554048 -57950505 - FLAM_A SINE Alu 0 133 1 1463 231 117 5 chr17 31554074 31554519 -57950034 - L1ME3 LINE L1 -24 6138 5644 1290 180 124 8 chr17 31554520 31554770 -57949783 - AluJo SINE Alu -32 280 2 249 284 45 0 chr17 31554852 31554919 -57949634 - L2 LINE L2 0 3313 3244 508 147 0 0 chr17 31554942 31555017 -57949536 + AluS SINE Alu 2 76 -237 2166 113 6 26 chr17 31555126 31555437 -57949116 - AluSx SINE Alu -7 305 1 490 122 11 0 chr17 31555464 31555554 -57948999 - FLAM_A SINE Alu -10 132 42 367 185 49 12 chr17 31555567 31555648 -57948905 - MIR SINE MIR -109 153 70 247 316 7 37 chr17 31556194 31556330 -57948223 + GA-rich Low_complexity Low_complexity 4 135 0 326 243 7 57 chr17 31556931 31557071 -57947482 + GA-rich Low_complexity Low_complexity 3 135 0 281 344 0 48 chr17 31557035 31557224 -57947329 + G-rich Low_complexity Low_complexity 1 180 0 * 417 300 75 12 chr17 31558351 31558511 -57946042 + MIR SINE MIR 34 203 -59 220 319 11 11 chr17 31558550 31558641 -57945912 + L2 LINE L2 2865 2955 -317 2247 88 51 0 chr17 31558642 31558937 -57945616 - AluSx SINE Alu -2 310 1 2708 48 0 0 chr17 31558938 31559249 -57945304 - AluY SINE Alu 0 311 1 2173 116 17 3 chr17 31559249 31559541 -57945012 - AluSx SINE Alu -16 296 1 624 250 21 0 chr17 31559607 31559751 -57944802 + MIR SINE MIR 18 164 -98 698 185 0 15 chr17 31559754 31559889 -57944664 + FLAM_A SINE Alu 1 133 0 677 75 0 21 chr17 31559947 31560041 -57944512 + AluS SINE Alu 2 93 -220 1633 132 58 0 chr17 31560046 31560289 -57944264 - AluSq SINE Alu -56 257 1 993 125 13 13 chr17 31560411 31560563 -57943990 - AluSx SINE Alu -159 153 2 203 361 0 12 chr17 31560656 31560739 -57943814 + MIR SINE MIR 92 173 -89 1035 207 28 0 chr17 31561153 31561366 -57943187 - MER20 DNA MER1_type 0 219 1 2457 90 3 0 chr17 31561812 31562123 -57942430 - AluSp SINE Alu 0 313 2 1976 145 0 42 chr17 31562306 31562444 -57942109 + AluSx SINE Alu 1 143 -169 2053 91 4 8 chr17 31562444 31562708 -57941845 + AluSc SINE Alu 38 300 -9 2203 93 0 4 chr17 31562708 31562986 -57941567 + AluSp SINE Alu 1 278 -35 183 100 0 0 chr17 31562990 31563020 -57941533 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1976 145 0 42 chr17 31563020 31563185 -57941368 + AluSx SINE Alu 145 297 -15 483 323 79 16 chr17 31563190 31563379 -57941174 + MIR SINE MIR 55 255 -7 1470 196 82 11 chr17 31563434 31563546 -57941007 + AluJo SINE Alu 1 104 -208 2060 125 7 14 chr17 31563546 31563843 -57940710 + AluSx SINE Alu 1 295 -17 1470 196 82 11 chr17 31563843 31564011 -57940542 + AluJo SINE Alu 104 301 -11 422 331 12 0 chr17 31564060 31564220 -57940333 - L2 LINE L2 -687 2627 2466 1904 97 0 0 chr17 31564250 31564487 -57940066 + AluSg SINE Alu 3 239 -71 1874 174 0 0 chr17 31564489 31564782 -57939771 + AluJb SINE Alu 11 303 -9 1792 139 28 6 chr17 31564782 31565106 -57939447 + L1MA8 LINE L1 5958 6288 -3 2087 153 3 0 chr17 31565116 31565417 -57939136 + AluSx SINE Alu 7 308 -4 1061 147 0 7 chr17 31565417 31565567 -57938986 + AluJo/FRAM SINE Alu 134 282 -30 288 0 0 0 chr17 31565573 31565605 -57938948 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 874 245 166 59 chr17 31565662 31565872 -57938681 - MLT1E LTR MaLR -159 434 248 2071 125 17 0 chr17 31565872 31566159 -57938394 + AluSg SINE Alu 1 292 -18 874 245 166 59 chr17 31566159 31566340 -57938213 - MLT1E LTR MaLR -345 248 1 842 295 134 8 chr17 31566359 31566725 -57937828 + LTR16C LTR ERVL 71 482 -9 1541 189 57 79 chr17 31566726 31567074 -57937479 - MLT1C LTR MaLR 0 467 113 1721 174 3 61 chr17 31567074 31567264 -57937289 - AluJb SINE Alu -3 309 110 2058 152 3 0 chr17 31567264 31567567 -57936986 + AluSx SINE Alu 1 304 -8 2374 62 0 59 chr17 31567569 31567876 -57936677 + AluY SINE Alu 3 291 -20 1721 174 3 61 chr17 31567876 31568010 -57936543 - AluJb SINE Alu -203 109 1 1541 189 57 79 chr17 31568010 31568131 -57936422 - MLT1C LTR MaLR -354 113 8 323 246 12 18 chr17 31568173 31568344 -57936209 + G-rich Low_complexity Low_complexity 1 170 0 303 157 5 78 chr17 31568397 31568588 -57935965 + GA-rich Low_complexity Low_complexity 1 177 0 2107 76 80 0 chr17 31568739 31569027 -57935526 - AluSq SINE Alu 0 309 1 2265 110 3 0 chr17 31569041 31569351 -57935202 - AluY SINE Alu 0 311 1 457 174 0 0 chr17 31569353 31569439 -57935114 - AluS SINE Alu 0 311 226 273 290 47 0 chr17 31569449 31569556 -57934997 - L2 LINE L2 -1190 2124 2013 252 322 76 0 chr17 31569582 31569700 -57934853 - L2 LINE L2 -1430 1884 1758 696 180 16 0 chr17 31569708 31569836 -57934717 + MER2 DNA MER2_type 2 131 -214 320 174 0 14 chr17 31569836 31569905 -57934648 + (TA)n Simple_repeat Simple_repeat 1 68 0 1501 129 0 9 chr17 31569910 31570120 -57934433 - AluSx SINE Alu -56 256 49 22 0 0 0 chr17 31570120 31570142 -57934411 + AT_rich Low_complexity Low_complexity 1 22 0 37 32 0 16 chr17 31570223 31570249 -57934304 + AT_rich Low_complexity Low_complexity 1 26 -35 2416 68 3 46 chr17 31570249 31570382 -57934171 + AluY SINE Alu 1 138 -173 2244 100 23 3 chr17 31570382 31570508 -57934045 + AluSc SINE Alu 1 123 -186 189 0 0 0 chr17 31570508 31570529 -57934024 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2244 100 23 3 chr17 31570529 31570703 -57933850 + AluSc SINE Alu 123 307 -2 2416 68 3 46 chr17 31570703 31570893 -57933660 + AluY SINE Alu 138 310 -1 37 32 0 16 chr17 31570893 31570928 -57933625 + AT_rich Low_complexity Low_complexity 26 61 0 180 0 0 0 chr17 31570931 31570951 -57933602 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1503 192 4 15 chr17 31570951 31571222 -57933331 - AluJo SINE Alu -32 280 13 2052 125 0 10 chr17 31571248 31571536 -57933017 - AluSx SINE Alu -1 311 27 414 184 13 0 chr17 31571542 31571618 -57932935 + MER2 DNA MER2_type 268 344 -1 243 224 0 35 chr17 31571624 31571682 -57932871 - MLT1D LTR MaLR -8 459 404 1069 253 80 50 chr17 31571736 31571969 -57932584 - MLT1D LTR MaLR -53 452 227 1993 141 0 20 chr17 31571969 31572274 -57932279 - AluJb SINE Alu -1 311 13 1069 253 80 50 chr17 31572274 31572304 -57932249 - MLT1D LTR MaLR -278 227 199 1903 154 29 16 chr17 31572304 31572610 -57931943 - AluSx SINE Alu -2 310 1 1069 253 80 50 chr17 31572610 31572784 -57931769 - MLT1D LTR MaLR -306 199 1 695 172 50 89 chr17 31572833 31572879 -57931674 + MLT1A1 LTR MaLR 1 47 -318 1837 167 0 13 chr17 31572879 31573191 -57931362 - AluSq SINE Alu -5 308 1 695 172 50 89 chr17 31573191 31573324 -57931229 + MLT1A1 LTR MaLR 47 173 -192 2018 132 3 3 chr17 31573374 31573677 -57930876 + AluSx SINE Alu 1 303 -9 225 307 40 0 chr17 31573870 31573945 -57930608 + L2 LINE L2 2627 2704 -610 378 107 0 0 chr17 31573968 31574024 -57930529 + (TCCCC)n Simple_repeat Simple_repeat 1 56 0 1911 145 10 0 chr17 31574024 31574320 -57930233 - AluSx SINE Alu -13 299 1 1721 174 0 10 chr17 31574320 31574618 -57929935 - AluJo SINE Alu -17 295 1 311 303 34 17 chr17 31574722 31574841 -57929712 + L2 LINE L2 3176 3296 -17 2242 113 0 0 chr17 31574871 31575180 -57929373 + AluSx SINE Alu 1 309 -3 360 88 0 0 chr17 31575294 31575351 -57929202 + (CA)n Simple_repeat Simple_repeat 2 58 0 233 260 151 0 chr17 31575894 31575967 -57928586 + L2 LINE L2 3163 3246 -26 300 303 0 0 chr17 31576466 31576542 -57928011 + Charlie8 DNA MER1_type 26 101 -2316 2307 53 0 0 chr17 31576544 31576873 -57927680 - AluY SINE Alu 0 329 1 1845 105 3 21 chr17 31576904 31577211 -57927342 - AluSx SINE Alu 0 312 11 2289 101 3 0 chr17 31577281 31577587 -57926966 + AluSx SINE Alu 3 309 -3 1719 133 63 11 chr17 31577858 31578144 -57926409 + AluJo SINE Alu 3 303 -9 641 226 67 38 chr17 31578278 31578646 -57925907 - MLT1C LTR MaLR 0 467 69 508 195 220 0 chr17 31578647 31578765 -57925788 + MLT1A1 LTR MaLR 2 145 -220 3738 137 0 33 chr17 31578775 31579028 -57925525 + L1PA15 LINE L1 5576 5836 -329 2027 124 7 3 chr17 31579028 31579327 -57925226 + AluSx SINE Alu 1 300 -12 3738 137 0 33 chr17 31579327 31579479 -57925074 + L1PA15 LINE L1 5836 5991 -174 2168 124 0 0 chr17 31579479 31579785 -57924768 + AluSx SINE Alu 1 306 -6 3738 137 0 33 chr17 31579785 31579986 -57924567 + L1PA15 LINE L1 5991 6163 -2 1829 152 3 19 chr17 31579996 31580130 -57924423 + AluJb SINE Alu 1 136 -176 2195 104 0 3 chr17 31580130 31580427 -57924126 + AluSc SINE Alu 1 296 -13 1829 152 3 19 chr17 31580427 31580608 -57923945 + AluJb SINE Alu 136 311 -1 1604 115 0 0 chr17 31580615 31580833 -57923720 + AluSx SINE Alu 1 218 -94 574 123 0 0 chr17 31580833 31580914 -57923639 + MLT1A1 LTR MaLR 224 304 -61 2224 115 0 0 chr17 31580917 31581222 -57923331 + AluSx SINE Alu 1 305 -7 1912 174 13 19 chr17 31581230 31581604 -57922949 + Tigger2a DNA MER2_type 1 372 -62 1286 122 6 0 chr17 31581606 31581787 -57922766 + AluJo SINE Alu 1 182 -130 2105 98 3 3 chr17 31581793 31582088 -57922465 - AluSx SINE Alu -17 295 1 2109 121 3 0 chr17 31582125 31582432 -57922121 - AluSx SINE Alu -4 308 1 35 41 0 0 chr17 31583063 31583112 -57921441 + AT_rich Low_complexity Low_complexity 1 49 0 1658 150 10 42 chr17 31583151 31583337 -57921216 - AluJo SINE Alu -9 303 129 2350 84 0 0 chr17 31583337 31583633 -57920920 + AluSx SINE Alu 2 297 -15 1658 150 10 42 chr17 31583633 31583759 -57920794 - AluJo SINE Alu -183 129 1 2028 142 0 0 chr17 31583774 31584076 -57920477 - AluSx SINE Alu -10 302 1 1523 166 25 0 chr17 31584087 31584371 -57920182 - L1MB7 LINE L1 -54 6130 5840 387 331 20 7 chr17 31584383 31584534 -57920019 - L1ME3 LINE L1 -25 6137 5985 2188 109 0 7 chr17 31584553 31584857 -57919696 - AluSx SINE Alu -8 304 3 784 197 165 0 chr17 31584859 31585047 -57919506 + MER20 DNA MER1_type 1 219 0 1293 273 31 3 chr17 31585065 31585424 -57919129 - L1ME3 LINE L1 -205 5957 5589 490 290 24 0 chr17 31585434 31585558 -57918995 + Charlie8 DNA MER1_type 89 215 -2202 516 238 26 33 chr17 31586961 31587112 -57917441 - L2 LINE L2 -1 3312 3163 323 73 0 0 chr17 31587137 31587178 -57917375 + FLAM SINE Alu 71 111 -22 1281 122 0 0 chr17 31587258 31587439 -57917114 - AluSg/x SINE Alu -10 300 120 2515 55 0 0 chr17 31587445 31587756 -57916797 - AluY SINE Alu 0 311 1 203 361 98 30 chr17 31587832 31587965 -57916588 + L2 LINE L2 2511 2652 -662 997 87 0 0 chr17 31587980 31588107 -57916446 - FLAM_C SINE Alu -5 128 2 32 26 0 0 chr17 31588114 31588153 -57916400 + AT_rich Low_complexity Low_complexity 1 39 0 834 177 0 7 chr17 31588153 31588300 -57916253 - FRAM SINE Alu -22 154 9 207 139 0 0 chr17 31588311 31588347 -57916206 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 1837 141 23 3 chr17 31588347 31588651 -57915902 - AluSx SINE Alu -2 310 1 2051 86 7 21 chr17 31588658 31588811 -57915742 - AluSg SINE Alu -16 294 145 8161 52 1 0 chr17 31588811 31589779 -57914774 - LTR5 LTR ERVK 0 969 1 2051 86 7 21 chr17 31589779 31589916 -57914637 - AluSg SINE Alu -165 145 8 2221 183 52 68 chr17 31589930 31590490 -57914063 - L1MB5 LINE L1 -2 6172 5621 1956 133 0 17 chr17 31590490 31590791 -57913762 - AluJo SINE Alu -16 296 1 2221 183 52 68 chr17 31590791 31590830 -57913723 - L1MB5 LINE L1 -553 5621 5583 2287 76 0 0 chr17 31590838 31591168 -57913385 - AluY SINE Alu 0 311 1 1133 178 111 41 chr17 31591276 31591546 -57913007 - 7SLRNA srpRNA srpRNA -31 289 1 237 313 75 15 chr17 31591550 31591684 -57912869 + L2 LINE L2 2692 2833 -481 1627 160 15 0 chr17 31591698 31591967 -57912586 + AluJb SINE Alu 1 273 -39 2063 107 7 0 chr17 31592051 31592342 -57912211 - AluSx SINE Alu -19 293 1 231 306 56 0 chr17 31592380 31592452 -57912101 + MIR SINE MIR 117 192 -70 220 180 250 40 chr17 31592584 31592684 -57911869 + L2 LINE L2 2420 2540 -774 2260 99 3 0 chr17 31592689 31593001 -57911552 + AluSp SINE Alu 1 313 0 1849 131 0 44 chr17 31593009 31593347 -57911206 + AluSx SINE Alu 1 325 0 533 160 14 3 chr17 31593491 31593715 -57910838 + AluJo SINE Alu 14 296 -16 661 86 0 2 chr17 31593721 31593942 -57910611 + AluSx SINE Alu 6 274 -35 285 51 0 0 chr17 31593945 31593984 -57910569 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 28 86 0 0 chr17 31597838 31597908 -57906645 + GC_rich Low_complexity Low_complexity 1 70 0 35 63 0 0 chr17 31598014 31598077 -57906476 + GC_rich Low_complexity Low_complexity 1 63 0 21 89 0 0 chr17 31598181 31598237 -57906316 + GC_rich Low_complexity Low_complexity 1 56 0 267 79 0 0 chr17 31598356 31598394 -57906159 + (T)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr17 31599017 31599044 -57905509 + GC_rich Low_complexity Low_complexity 1 27 0 351 165 0 0 chr17 31599784 31599869 -57904684 + CT-rich Low_complexity Low_complexity 2 86 0 182 111 0 0 chr17 31601865 31601892 -57902661 - L2 LINE L2 -96 3217 3191 2148 118 0 10 chr17 31601928 31602241 -57902312 + AluSx SINE Alu 1 310 -2 397 340 117 26 chr17 31602376 31602753 -57901800 + L2 LINE L2 2887 3297 -16 1597 185 10 10 chr17 31602760 31603062 -57901491 + AluJo SINE Alu 3 304 -8 649 248 33 56 chr17 31603309 31603523 -57901030 - MER20 DNA MER1_type 0 219 11 1876 130 3 19 chr17 31603556 31603863 -57900690 + AluJb SINE Alu 5 306 -6 769 202 153 0 chr17 31603869 31604052 -57900501 - MER58C DNA MER1_type -1 214 4 586 242 25 93 chr17 31604138 31604433 -57900120 + L2 LINE L2 2796 3110 -203 2297 106 0 0 chr17 31604433 31604745 -57899808 + AluSx SINE Alu 1 312 0 1721 142 51 7 chr17 31604752 31605047 -57899506 + AluJo SINE Alu 1 308 -4 586 242 25 93 chr17 31605047 31605109 -57899444 + L2 LINE L2 3116 3133 -180 243 212 61 15 chr17 31605126 31605192 -57899361 + L2 LINE L2 3237 3305 -8 217 268 0 12 chr17 31605619 31605701 -57898852 - L2 LINE L2 -216 3056 2976 691 263 127 20 chr17 31606140 31606563 -57897990 + L2 LINE L2 2648 3104 -209 265 326 30 8 chr17 31606987 31607119 -57897434 - L2 LINE L2 -556 2758 2624 1697 182 14 0 chr17 31607197 31607488 -57897065 - AluJo SINE Alu -17 295 1 416 252 113 118 chr17 31607511 31607846 -57896707 - L2 LINE L2 -5 3308 2973 1856 157 0 3 chr17 31607846 31608145 -57896408 - AluJb SINE Alu -14 298 1 416 252 113 118 chr17 31608145 31608599 -57895954 - L2 LINE L2 -340 2973 2379 212 279 81 12 chr17 31608667 31608753 -57895800 - MIR SINE MIR -91 171 80 1917 141 0 10 chr17 31609315 31609612 -57894941 + AluJb SINE Alu 19 312 0 374 306 82 6 chr17 31609824 31609994 -57894559 + MIR SINE MIR 23 205 -57 1752 177 57 73 chr17 31610186 31610258 -57894295 - MLT1C LTR MaLR 0 467 395 1828 156 0 7 chr17 31610258 31610553 -57894000 - AluJb SINE Alu -11 301 9 1752 177 57 73 chr17 31610553 31610920 -57893633 - MLT1C LTR MaLR -72 395 35 1646 174 32 0 chr17 31610920 31611201 -57893352 - AluJo SINE Alu -16 296 7 2011 119 0 32 chr17 31611663 31611973 -57892580 + AluSx SINE Alu 1 300 -12 1993 132 0 28 chr17 31611973 31612292 -57892261 + AluSx SINE Alu 1 310 -2 1227 229 71 68 chr17 31612345 31612521 -57892032 + MLT1B LTR MaLR 2 176 -214 1932 147 0 6 chr17 31612521 31612833 -57891720 + AluJb SINE Alu 1 310 -2 1227 229 71 68 chr17 31612833 31613036 -57891517 + MLT1B LTR MaLR 176 382 -8 291 329 147 0 chr17 31613077 31613220 -57891333 - MIR SINE MIR -29 233 70 1462 146 9 0 chr17 31613411 31613644 -57890909 - AluSp SINE Alu -4 309 75 2648 32 0 0 chr17 31613644 31613952 -57890601 - AluY SINE Alu -1 310 1 666 80 11 0 chr17 31613952 31614040 -57890513 - AluSp SINE Alu -223 90 2 705 99 0 13 chr17 31614046 31614166 -57890387 + L1MA9 LINE L1 5831 5942 -215 369 266 141 73 chr17 31614304 31614353 -57890200 - L1ME4a LINE L1 -38 6083 6039 2162 96 14 0 chr17 31614353 31614644 -57889909 - AluSq SINE Alu -18 295 1 369 266 141 73 chr17 31614644 31614696 -57889857 - L1ME4a LINE L1 -82 6039 5992 2271 86 0 0 chr17 31614696 31614998 -57889555 - AluSc SINE Alu -7 302 1 369 266 141 73 chr17 31614998 31615143 -57889410 - L1ME4a LINE L1 -129 5992 5819 1868 134 10 3 chr17 31615177 31615468 -57889085 - AluSx SINE Alu -19 293 1 994 155 150 0 chr17 31615632 31615819 -57888734 - Tigger3(Golem) DNA MER2_type -7 3022 2808 1131 132 0 16 chr17 31616489 31616671 -57887882 - AluSg/x SINE Alu 0 312 134 1876 148 7 0 chr17 31616671 31616968 -57887585 - AluSx SINE Alu -13 299 1 844 227 46 10 chr17 31617212 31617406 -57887147 + AluSg/x SINE Alu 112 312 0 704 192 16 0 chr17 31617427 31617552 -57887001 - FLAM_A SINE Alu -8 134 8 1693 121 4 37 chr17 31617721 31617859 -57886694 + AluSx SINE Alu 6 132 -180 2252 78 0 19 chr17 31617859 31618166 -57886387 + AluSp SINE Alu 1 301 -12 1693 121 4 37 chr17 31618166 31618299 -57886254 + AluSx SINE Alu 132 268 -44 1200 134 24 38 chr17 31618774 31618983 -57885570 + AluJo SINE Alu 1 206 -106 1218 145 21 89 chr17 31619083 31619131 -57885422 + L1MA9 LINE L1 6010 6060 -252 1688 154 14 10 chr17 31619131 31619423 -57885130 + AluJo SINE Alu 3 295 -17 1218 145 21 89 chr17 31619423 31619471 -57885082 + L1MA9 LINE L1 6060 6110 -202 1824 153 14 0 chr17 31619471 31619759 -57884794 + AluSx SINE Alu 1 292 -20 1218 145 21 89 chr17 31619759 31619986 -57884567 + L1MA9 LINE L1 6110 6312 0 1384 191 14 83 chr17 31620007 31620170 -57884383 + L1MB7 LINE L1 5735 5863 -321 1667 154 0 32 chr17 31620170 31620455 -57884098 + AluJb SINE Alu 1 276 -36 1384 191 14 83 chr17 31620455 31620642 -57883911 + L1MB7 LINE L1 5863 6061 -123 1911 105 79 0 chr17 31620642 31620919 -57883634 + AluSx SINE Alu 1 299 -13 345 293 25 38 chr17 31621035 31621192 -57883361 - L2 LINE L2 -761 2553 2399 245 186 35 47 chr17 31621449 31621535 -57883018 - MIR SINE MIR -77 131 47 981 100 0 14 chr17 31621580 31621720 -57882833 - FRAM SINE Alu -10 166 29 1289 67 0 6 chr17 31621820 31621984 -57882569 - AluY SINE Alu -148 163 1 1651 109 83 4 chr17 31621994 31622259 -57882294 - AluSc SINE Alu -23 286 1 302 216 0 0 chr17 31622505 31622556 -57881997 + L1MC4 LINE L1 6653 6703 -1339 1717 158 42 0 chr17 31622557 31622841 -57881712 - AluSx SINE Alu -16 296 1 867 189 0 0 chr17 31622841 31622989 -57881564 - AluJb SINE Alu -5 307 160 1374 186 31 41 chr17 31622861 31622998 -57881555 - AluJb SINE Alu -15 287 150 2024 138 3 35 chr17 31622998 31623182 -57881371 - AluSx SINE Alu -3 309 138 2148 115 0 7 chr17 31623182 31623478 -57881075 - AluSq SINE Alu -19 294 1 2024 138 3 35 chr17 31623478 31623612 -57880941 - AluSx SINE Alu -174 138 1 1374 186 31 41 chr17 31623612 31623630 -57880923 - AluJb SINE Alu -152 150 133 2306 73 3 10 chr17 31623630 31623930 -57880623 - AluY SINE Alu -13 298 1 1374 186 31 41 chr17 31623930 31624063 -57880490 - AluJb SINE Alu -169 133 1 2090 119 3 29 chr17 31624155 31624291 -57880262 + AluSx SINE Alu 1 139 -173 2278 100 0 0 chr17 31624291 31624595 -57879958 + AluSc SINE Alu 1 304 0 2090 119 3 29 chr17 31624595 31624768 -57879785 + AluSx SINE Alu 139 303 -9 2437 78 0 0 chr17 31625950 31626243 -57878310 - AluSg SINE Alu -17 293 1 194 0 39 0 chr17 31626308 31626334 -57878219 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1943 123 7 7 chr17 31626336 31626612 -57877941 - AluSx SINE Alu -36 276 1 1877 144 7 10 chr17 31626666 31626958 -57877595 + AluSx SINE Alu 3 293 -19 1936 131 27 0 chr17 31626999 31627296 -57877257 + AluSx SINE Alu 1 305 -7 198 214 18 0 chr17 31627347 31627403 -57877150 - MER5C DNA MER1_type -7 317 261 270 157 98 0 chr17 31627881 31627932 -57876621 - AluYb8 SINE Alu -44 264 209 1336 212 3 43 chr17 31628035 31628161 -57876392 + AluJo SINE Alu 2 131 -171 2039 118 3 3 chr17 31628161 31628448 -57876105 - AluSg SINE Alu -23 287 1 1336 212 3 43 chr17 31628448 31628623 -57875930 + AluJo SINE Alu 131 291 -11 22 0 0 0 chr17 31628624 31628646 -57875907 + AT_rich Low_complexity Low_complexity 1 22 0 872 215 0 6 chr17 31628649 31628812 -57875741 + FRAM SINE Alu 4 165 -1 503 204 0 19 chr17 31628827 31628930 -57875623 + FRAM SINE Alu 66 166 -10 371 291 43 8 chr17 31629305 31629422 -57875131 + L2 LINE L2 3134 3254 -18 2156 106 0 14 chr17 31629547 31629863 -57874690 + AluSg SINE Alu 1 310 0 2152 96 0 4 chr17 31629900 31630219 -57874334 + AluSc SINE Alu 1 318 0 1635 208 0 0 chr17 31630225 31630519 -57874034 + AluJo SINE Alu 1 294 -18 2032 127 3 20 chr17 31630522 31630821 -57873732 + AluSx SINE Alu 1 294 -18 2117 138 0 0 chr17 31631070 31631374 -57873179 + AluSx SINE Alu 1 304 -8 1663 168 31 11 chr17 31631562 31631848 -57872705 + AluJo SINE Alu 1 292 -20 2183 133 0 0 chr17 31631848 31632149 -57872404 + AluSx SINE Alu 1 301 -11 2408 65 20 0 chr17 31632149 31632442 -57872111 + AluY SINE Alu 1 299 -12 2565 59 0 3 chr17 31632844 31633149 -57871404 + AluY SINE Alu 2 305 -6 632 139 0 56 chr17 31633331 31633439 -57871114 + AluJb SINE Alu 192 293 -19 2309 105 0 13 chr17 31633509 31633822 -57870731 - AluSg SINE Alu -1 309 1 186 43 0 0 chr17 31634396 31634419 -57870134 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 249 179 0 0 chr17 31634422 31634461 -57870092 - Alu SINE Alu -178 124 86 1179 156 37 28 chr17 31634461 31634679 -57869874 - AluJo SINE Alu -92 220 1 2174 88 14 3 chr17 31634893 31635190 -57869363 - AluSq SINE Alu -13 300 1 30 0 0 0 chr17 31635299 31635329 -57869224 + AT_rich Low_complexity Low_complexity 1 30 0 1537 100 131 4 chr17 31635332 31635466 -57869087 - AluJb SINE Alu -19 293 177 333 68 0 0 chr17 31635466 31635510 -57869043 + (TAG)n Simple_repeat Simple_repeat 1 44 0 1537 100 131 4 chr17 31635510 31635635 -57868918 - AluJb SINE Alu -135 177 1 194 219 0 0 chr17 31635641 31635682 -57868871 + MIR SINE MIR 108 148 -114 215 157 20 0 chr17 31637250 31637301 -57867252 + (TA)n Simple_repeat Simple_repeat 1 52 0 2274 76 3 10 chr17 31637306 31637596 -57866957 - AluSg SINE Alu -22 288 1 22 0 0 0 chr17 31637599 31637621 -57866932 + AT_rich Low_complexity Low_complexity 1 22 0 707 153 14 62 chr17 31638590 31638734 -57865819 - FLAM_C SINE Alu 0 143 7 2982 132 73 2 chr17 31638753 31639298 -57865255 - L1MB7 LINE L1 -16 6168 5585 1814 159 40 3 chr17 31639309 31639610 -57864943 - AluJb SINE Alu 0 312 1 1712 159 3 52 chr17 31639612 31639826 -57864727 - AluJo SINE Alu -18 294 98 1899 94 8 122 chr17 31639826 31640178 -57864375 - AluSq SINE Alu -1 312 1 1712 159 3 52 chr17 31640178 31640272 -57864281 - AluJo SINE Alu -214 98 1 310 226 88 20 chr17 31640703 31640805 -57863748 - L2 LINE L2 -1 3312 3204 1611 98 0 5 chr17 31640980 31641194 -57863359 + AluSg/x SINE Alu 79 291 -19 2040 122 14 10 chr17 31641562 31641856 -57862697 + AluSx SINE Alu 1 295 -17 2005 107 0 0 chr17 31641925 31642178 -57862375 + AluSq SINE Alu 1 253 -60 1778 131 7 43 chr17 31642278 31642425 -57862128 - AluSx SINE Alu -40 272 138 2161 127 0 3 chr17 31642425 31642732 -57861821 - AluSg SINE Alu -4 306 1 1778 131 7 43 chr17 31642732 31642866 -57861687 - AluSx SINE Alu -174 138 1 2177 122 3 0 chr17 31642870 31643173 -57861380 - AluSx SINE Alu -8 304 1 764 156 8 0 chr17 31643184 31643312 -57861241 - FLAM_C SINE Alu -10 133 5 2057 114 26 19 chr17 31643324 31643632 -57860921 - AluSx SINE Alu 0 312 3 465 274 45 21 chr17 31643872 31644040 -57860513 + L1ME LINE L1 5601 5769 -386 1841 127 14 4 chr17 31644042 31644318 -57860235 + AluJb SINE Alu 11 289 -23 1345 147 18 5 chr17 31644329 31644553 -57860000 + AluJo SINE Alu 86 312 0 2144 98 9 58 chr17 31644674 31645000 -57859553 + AluSg SINE Alu 1 310 0 2139 119 17 0 chr17 31645023 31645325 -57859228 + AluSx SINE Alu 1 307 -5 2147 96 3 7 chr17 31645332 31645647 -57858906 + AluSx SINE Alu 2 312 0 286 278 22 33 chr17 31648362 31648452 -57856101 - MIR SINE MIR -149 113 25 2358 100 0 3 chr17 31648522 31648821 -57855732 - AluSx SINE Alu -14 298 1 2324 100 3 0 chr17 31651016 31651317 -57853236 - AluSx SINE Alu -10 302 1 2153 115 0 20 chr17 31651374 31651394 -57853159 - AluSx SINE Alu -12 300 281 186 71 0 0 chr17 31651394 31651422 -57853131 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2153 115 0 20 chr17 31651422 31651706 -57852847 - AluSx SINE Alu -31 281 2 607 244 0 0 chr17 31651841 31651960 -57852593 - FLAM_A SINE Alu -10 123 5 1072 181 267 7 chr17 31652440 31652728 -57851825 - MLT1A1 LTR MaLR -2 363 1 1225 171 9 28 chr17 31652788 31653005 -57851548 - MER20 DNA MER1_type 0 219 7 189 239 30 45 chr17 31653245 31653312 -57851241 - MIR SINE MIR -75 187 122 746 140 7 60 chr17 31653822 31653972 -57850581 - FLAM_C SINE Alu 0 143 2 1304 77 71 0 chr17 31654126 31654308 -57850245 - AluY SINE Alu -12 299 105 26 30 0 0 chr17 31654706 31654739 -57849814 + AT_rich Low_complexity Low_complexity 1 33 0 1770 137 4 4 chr17 31655174 31655436 -57849117 - AluSq SINE Alu -18 295 34 289 143 0 0 chr17 31655687 31655736 -57848817 + Alu SINE Alu 252 300 -1 2254 97 3 7 chr17 31655802 31656100 -57848453 - AluSp SINE Alu -15 298 2 2246 97 0 10 chr17 31656150 31656449 -57848104 - AluSx SINE Alu -16 296 1 2086 136 0 0 chr17 31656533 31656846 -57847707 - AluSx SINE Alu 0 313 1 453 282 26 67 chr17 31656912 31657052 -57847501 + MIR SINE MIR 75 206 -56 1190 43 25 25 chr17 31657052 31657214 -57847339 + L1PA4 LINE L1 5994 6155 0 453 282 26 67 chr17 31657214 31657268 -57847285 + MIR SINE MIR 206 261 -1 241 299 197 0 chr17 31657439 31657556 -57846997 + L2 LINE L2 3171 3310 -3 458 242 83 15 chr17 31657669 31657801 -57846752 - MLT1H LTR MaLR 0 549 409 207 302 0 0 chr17 31657923 31657976 -57846577 + CT-rich Low_complexity Low_complexity 1 53 0 272 259 94 80 chr17 31657991 31658209 -57846344 - MLT1H LTR MaLR -312 243 21 284 264 239 5 chr17 31658320 31658517 -57846036 + MIR SINE MIR 7 249 -13 2453 81 0 0 chr17 31658684 31658992 -57845561 - AluY SINE Alu -3 308 1 2216 121 0 7 chr17 31658992 31659299 -57845254 - AluSg SINE Alu -5 305 1 2007 148 3 19 chr17 31659331 31659648 -57844905 - AluSx SINE Alu 0 312 1 1664 181 33 7 chr17 31659703 31660006 -57844547 - AluJb SINE Alu -1 311 1 2100 114 13 29 chr17 31660229 31660544 -57844009 - AluSg SINE Alu 0 310 1 1982 158 0 0 chr17 31660870 31661161 -57843392 + AluJo SINE Alu 1 291 -21 2246 70 21 7 chr17 31661928 31662214 -57842339 + AluSg SINE Alu 1 290 -20 2488 91 0 0 chr17 31662233 31662542 -57842011 + AluSq SINE Alu 1 309 -4 302 153 17 0 chr17 31662584 31662643 -57841910 - MER5A DNA MER1_type -83 106 47 1954 152 36 0 chr17 31662998 31663300 -57841253 + AluSq SINE Alu 1 313 0 512 165 104 17 chr17 31663739 31663854 -57840699 - FLAM_C SINE Alu -8 125 1 1576 164 85 14 chr17 31663885 31664166 -57840387 + AluJo SINE Alu 1 301 -11 225 362 17 0 chr17 31664349 31664465 -57840088 + MER5A DNA MER1_type 72 189 0 201 39 0 0 chr17 31664747 31664773 -57839780 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 2036 164 0 0 chr17 31664781 31665079 -57839474 - AluJb SINE Alu -14 298 1 2234 110 3 7 chr17 31665088 31665387 -57839166 - AluSg SINE Alu -12 298 1 422 274 14 85 chr17 31665508 31665622 -57838931 - MIR SINE MIR -1 261 169 2163 121 3 0 chr17 31665622 31665919 -57838634 - AluSx SINE Alu -14 298 1 422 274 14 85 chr17 31665919 31666027 -57838526 - MIR SINE MIR -93 169 55 2686 146 65 0 chr17 31666100 31666579 -57837974 + L1MA9 LINE L1 5759 6268 -44 2054 136 47 36 chr17 31666948 31667308 -57837245 - THE1B LTR MaLR 0 364 1 852 101 0 8 chr17 31667513 31667632 -57836921 - L1MA2 LINE L1 -37 6267 6150 1921 133 7 11 chr17 31667644 31667929 -57836624 - AluJb SINE Alu -20 292 9 1859 153 28 0 chr17 31668097 31668384 -57836169 + AluJb SINE Alu 1 295 -17 2368 80 3 3 chr17 31668400 31668700 -57835853 + AluSc SINE Alu 1 300 -9 192 303 161 64 chr17 31668708 31668926 -57835627 - L2 LINE L2 -92 3180 2942 195 366 30 23 chr17 31668961 31669092 -57835461 - L2 LINE L2 -568 2746 2615 2073 131 0 0 chr17 31669102 31669385 -57835168 + AluSx SINE Alu 14 296 -16 909 114 0 0 chr17 31669395 31669518 -57835035 + FLAM_C SINE Alu 3 125 -8 1227 141 117 82 chr17 31669599 31669747 -57834806 + AluJo SINE Alu 1 142 -170 2412 87 0 0 chr17 31669747 31670046 -57834507 + AluY SINE Alu 2 300 -11 1227 141 117 82 chr17 31670046 31670188 -57834365 + AluJo SINE Alu 142 301 -11 328 318 32 32 chr17 31670441 31670661 -57833892 - L2 LINE L2 -1022 2292 2073 2108 87 90 0 chr17 31671118 31671395 -57833158 + AluSq SINE Alu 1 302 -11 1000 178 6 0 chr17 31671400 31671557 -57832996 + FRAM SINE Alu 1 158 -18 32 35 0 18 chr17 31671615 31671641 -57832912 + AT_rich Low_complexity Low_complexity 1 26 -30 2120 114 0 3 chr17 31671641 31671931 -57832622 - AluSg SINE Alu -21 289 1 32 35 0 18 chr17 31671931 31671961 -57832592 + AT_rich Low_complexity Low_complexity 26 56 0 2060 134 0 0 chr17 31672059 31672366 -57832187 - AluSx SINE Alu 0 307 1 2227 91 0 24 chr17 31672528 31672825 -57831728 - AluSg SINE Alu -20 290 1 1341 159 0 23 chr17 31672927 31673147 -57831406 + AluJo SINE Alu 85 299 -13 1906 141 37 3 chr17 31673732 31674031 -57830522 + AluSx SINE Alu 1 309 -3 1213 102 0 6 chr17 31674031 31674197 -57830356 + AluSg/x SINE Alu 134 298 -14 2027 111 3 63 chr17 31674936 31675269 -57829284 - AluSq SINE Alu 0 313 1 616 189 15 61 chr17 31675269 31675401 -57829152 - AluJo/FLAM SINE Alu -175 127 2 2288 91 3 50 chr17 31675406 31675724 -57828829 - AluSp SINE Alu -10 303 1 473 291 55 65 chr17 31675849 31676107 -57828446 - L1ME LINE L1 -464 5706 5452 1792 170 17 3 chr17 31676107 31676407 -57828146 - AluJo SINE Alu -8 304 1 473 291 55 65 chr17 31676407 31676550 -57828003 - L1ME LINE L1 -718 5452 5309 1665 177 21 3 chr17 31676791 31677079 -57827474 + AluJb SINE Alu 3 295 -17 1700 119 78 4 chr17 31677779 31678048 -57826505 - AluJo SINE Alu -23 289 1 252 316 118 31 chr17 31678520 31678699 -57825854 + MIR SINE MIR 4 212 -50 2161 104 3 7 chr17 31678775 31679062 -57825491 + AluSp SINE Alu 1 286 -27 2442 68 3 0 chr17 31679107 31679401 -57825152 + AluY SINE Alu 1 295 -16 2197 116 0 13 chr17 31679416 31679552 -57825001 + AluSx SINE Alu 1 137 -175 1868 133 42 7 chr17 31679552 31679837 -57824716 + AluSc SINE Alu 1 295 -14 2197 116 0 13 chr17 31679837 31680002 -57824551 + AluSx SINE Alu 137 298 -14 2286 94 0 7 chr17 31680007 31680316 -57824237 + AluSc SINE Alu 1 307 -2 994 243 47 25 chr17 31681239 31681474 -57823079 - MIR SINE MIR 0 262 23 790 97 9 18 chr17 31682219 31682332 -57822221 - AluSq/x SINE Alu -199 113 2 965 83 8 8 chr17 31682916 31683048 -57821505 + AluSq/x SINE Alu 1 132 -180 2324 83 3 0 chr17 31683051 31683340 -57821213 + AluSq SINE Alu 1 290 -23 698 228 27 124 chr17 31683358 31683514 -57821039 + MIR SINE MIR 29 152 -110 2252 105 0 0 chr17 31683514 31683808 -57820745 + AluSg1 SINE Alu 1 294 -15 698 228 27 124 chr17 31683808 31683910 -57820643 + MIR SINE MIR 152 262 0 1417 179 46 36 chr17 31684242 31684544 -57820009 - AluJo SINE Alu 0 312 8 2215 80 52 3 chr17 31684713 31685002 -57819551 + AluSg SINE Alu 1 303 -7 2061 114 31 7 chr17 31685040 31685329 -57819224 + AluSc SINE Alu 1 296 -13 2246 107 0 0 chr17 31686454 31686745 -57817808 - AluSq SINE Alu -14 299 9 803 145 0 30 chr17 31687576 31687707 -57816846 - FLAM_C SINE Alu -16 127 1 2038 148 0 0 chr17 31687979 31688269 -57816284 - AluSx SINE Alu -22 290 1 2259 117 0 13 chr17 31688339 31688655 -57815898 + AluSq SINE Alu 1 312 -1 2224 126 0 0 chr17 31688809 31689118 -57815435 + AluSx SINE Alu 1 309 -3 645 213 0 57 chr17 31689122 31689263 -57815290 + FLAM_A SINE Alu 1 133 0 555 227 23 16 chr17 31689597 31689725 -57814828 - MER77 LTR ERV1 0 605 477 1159 161 43 39 chr17 31689729 31689959 -57814594 + AluJo SINE Alu 1 231 -81 2241 84 3 3 chr17 31689998 31690285 -57814268 + AluY SINE Alu 1 287 -24 2383 98 0 0 chr17 31690673 31691015 -57813538 + AluSg SINE Alu 1 342 0 249 253 38 13 chr17 31691105 31691184 -57813369 - L1ME4a LINE L1 -52 6069 5989 189 0 0 0 chr17 31691195 31691216 -57813337 + (TA)n Simple_repeat Simple_repeat 2 22 0 304 302 119 45 chr17 31691282 31691461 -57813092 - L1ME4a LINE L1 -375 5746 5582 1823 157 3 13 chr17 31691461 31691761 -57812792 - AluSx SINE Alu -15 297 1 304 302 119 45 chr17 31691761 31692014 -57812539 - L1ME4a LINE L1 -539 5582 5285 715 179 232 21 chr17 31692816 31693006 -57811547 - MIR SINE MIR -3 259 30 2227 104 0 3 chr17 31693022 31693321 -57811232 + AluSg SINE Alu 1 298 -12 2094 120 3 10 chr17 31693912 31694213 -57810340 - AluSg SINE Alu -11 299 1 220 118 29 0 chr17 31694390 31694424 -57810129 + L2 LINE L2 3264 3298 -15 833 238 88 9 chr17 31694638 31694865 -57809688 - MIR SINE MIR 0 262 18 611 269 130 0 chr17 31695106 31695314 -57809239 - L1MC/D LINE L1 -2265 5543 5309 945 175 45 7 chr17 31695532 31695686 -57808867 - AluJo SINE Alu -6 296 137 2031 218 128 93 chr17 31695715 31695817 -57808736 + L1MC4 LINE L1 6761 6858 -1184 2376 91 3 0 chr17 31695817 31696125 -57808428 + AluSp SINE Alu 1 309 -4 2031 218 128 93 chr17 31696125 31696381 -57808172 + L1MC4 LINE L1 6858 7104 -938 793 197 16 0 chr17 31696381 31696508 -57808045 - AluJo SINE Alu -170 132 4 261 0 0 0 chr17 31696514 31696543 -57808010 + (TC)n Simple_repeat Simple_repeat 2 30 0 198 103 0 0 chr17 31696542 31696571 -57807982 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 2031 218 128 93 chr17 31696543 31697349 -57807204 + L1MC4 LINE L1 7108 7945 -97 945 70 0 0 chr17 31697449 31697564 -57806989 + AluSc SINE Alu 180 294 -15 838 169 0 0 chr17 31697576 31697700 -57806853 - FRAM SINE Alu -47 129 6 2190 110 7 7 chr17 31698295 31698604 -57805949 - AluSx SINE Alu -3 309 1 351 293 42 14 chr17 31699022 31699234 -57805319 - L2 LINE L2 -660 2654 2437 257 190 138 0 chr17 31699234 31699292 -57805261 - L2 LINE L2 -4 3309 3244 1728 156 7 4 chr17 31699322 31699597 -57804956 + AluJo SINE Alu 25 300 -12 208 156 16 78 chr17 31699599 31699663 -57804890 - L2 LINE L2 -62 3251 3192 375 210 174 14 chr17 31699682 31699820 -57804733 - L2 LINE L2 -286 3027 2868 2381 62 3 10 chr17 31700058 31700366 -57804187 + AluSg SINE Alu 1 306 -4 213 250 0 0 chr17 31700851 31700911 -57803642 + CT-rich Low_complexity Low_complexity 2 61 0 213 235 0 37 chr17 31701084 31701165 -57803388 + (CGG)n Simple_repeat Simple_repeat 1 78 0 206 236 10 35 chr17 31701770 31701842 -57802711 - MIR SINE MIR -38 170 97 855 161 0 0 chr17 31703031 31703161 -57801392 + FLAM_A SINE Alu 4 133 0 2312 76 3 13 chr17 31703268 31703570 -57800983 - AluSp SINE Alu -14 299 1 2185 127 10 0 chr17 31704480 31704780 -57799773 + AluSx SINE Alu 1 303 -9 5612 35 0 8 chr17 31704869 31705928 -57798625 - SVA Other Other -954 1386 5 849 80 36 0 chr17 31705932 31706044 -57798509 - AluY SINE Alu -19 292 177 2082 128 17 0 chr17 31706071 31706367 -57798186 - AluSq SINE Alu -12 301 1 2129 115 0 0 chr17 31706367 31706661 -57797892 - AluY SINE Alu -16 295 1 2272 94 7 3 chr17 31706666 31706964 -57797589 - AluSq SINE Alu -14 299 1 2144 124 3 10 chr17 31707134 31707448 -57797105 - AluSq SINE Alu -1 312 1 1624 139 24 98 chr17 31708059 31708469 -57796084 - MER58D DNA MER1_type -6 380 1 2324 97 10 0 chr17 31708522 31708820 -57795733 - AluSg SINE Alu -9 301 1 22 0 0 0 chr17 31708892 31708914 -57795639 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr17 31708942 31708964 -57795589 + AT_rich Low_complexity Low_complexity 1 22 0 2219 104 3 0 chr17 31708964 31709252 -57795301 - AluSp SINE Alu -24 289 1 367 224 0 0 chr17 31709508 31709575 -57794978 + AluJo SINE Alu 1 67 -235 1212 173 27 4 chr17 31709684 31709909 -57794644 + AluJo SINE Alu 72 301 -11 238 313 0 52 chr17 31709996 31710092 -57794461 - MARNA DNA Mariner -82 504 414 2134 119 0 3 chr17 31711078 31711399 -57793154 + AluSq SINE Alu 1 320 0 248 328 107 33 chr17 31711981 31712103 -57792450 - L2 LINE L2 -5 3267 3137 455 284 0 17 chr17 31712606 31712722 -57791831 - L3 LINE CR1 -20 1557 1444 827 145 167 0 chr17 31714354 31714492 -57790061 - AluSq SINE Alu -16 297 137 2030 133 17 0 chr17 31714493 31714795 -57789758 - AluSx SINE Alu -5 307 1 1470 101 223 8 chr17 31714797 31715059 -57789494 - AluSq SINE Alu 0 313 1 636 217 9 0 chr17 31715219 31715334 -57789219 + AluJb SINE Alu 2 117 -195 1850 104 48 4 chr17 31716605 31716873 -57787680 - AluSg SINE Alu -30 280 1 25 0 0 0 chr17 31717029 31717054 -57787499 + AT_rich Low_complexity Low_complexity 1 25 0 2127 134 0 0 chr17 31717140 31717431 -57787122 + AluSg SINE Alu 1 291 -19 2331 88 13 3 chr17 31717588 31717894 -57786659 + AluSc SINE Alu 1 309 0 1418 203 51 4 chr17 31717907 31718183 -57786370 + AluJo SINE Alu 1 289 -23 1223 195 54 64 chr17 31718195 31718493 -57786060 + AluJo SINE Alu 1 295 -17 735 209 0 59 chr17 31718691 31718844 -57785709 + FRAM SINE Alu 17 160 -16 28 0 0 0 chr17 31719040 31719068 -57785485 + AT_rich Low_complexity Low_complexity 1 28 0 1659 158 65 0 chr17 31719883 31720161 -57784392 + AluJb SINE Alu 1 296 -16 1889 84 28 4 chr17 31720191 31720440 -57784113 + AluY SINE Alu 2 256 -55 25 75 0 0 chr17 31721348 31721401 -57783152 + AT_rich Low_complexity Low_complexity 1 53 0 206 221 42 147 chr17 31721967 31722062 -57782491 - L2 LINE L2 -55 3217 3133 554 242 152 17 chr17 31722754 31722932 -57781621 - L2 LINE L2 0 3313 3112 2560 47 3 0 chr17 31923344 31923640 -57580913 - AluY SINE Alu -14 297 1 265 238 119 27 chr17 31923797 31923901 -57580652 + HAL1b LINE L1 910 1003 -345 2620 47 3 0 chr17 31923901 31924199 -57580354 + AluSp SINE Alu 1 299 -14 265 238 119 27 chr17 31924199 31924279 -57580274 + HAL1b LINE L1 1003 1111 -237 2289 73 17 0 chr17 31925737 31926024 -57578529 - AluSx SINE Alu -20 292 1 1826 134 34 14 chr17 31926237 31926529 -57578024 + AluJb SINE Alu 1 298 -14 1712 185 127 33 chr17 31926674 31926789 -57577764 + MLT1C LTR MaLR 1 104 -363 2483 65 3 3 chr17 31926789 31927099 -57577454 + AluY SINE Alu 1 310 -1 1712 185 127 33 chr17 31927099 31927410 -57577143 + MLT1C LTR MaLR 104 467 0 581 249 104 0 chr17 31927472 31927645 -57576908 + MIR SINE MIR 66 256 -6 1733 187 0 16 chr17 31928017 31928322 -57576231 + AluJb SINE Alu 1 300 -12 372 314 64 28 chr17 31928434 31928717 -57575836 - L2 LINE L2 -978 2336 2044 2397 92 3 0 chr17 31928722 31929027 -57575526 + AluSq SINE Alu 1 306 -7 706 235 36 0 chr17 31929067 31929233 -57575320 + L1ME3A LINE L1 5518 5689 -481 300 239 0 0 chr17 31929250 31929317 -57575236 + MER116 DNA Mariner 14 80 0 258 159 0 0 chr17 31929318 31929362 -57575191 + L1ME3A LINE L1 5688 5731 -439 881 204 159 29 chr17 31929387 31929480 -57575073 + L1ME3A LINE L1 5819 5899 -271 2018 114 10 23 chr17 31929480 31929779 -57574774 + AluSq SINE Alu 1 295 -18 881 204 159 29 chr17 31929779 31929993 -57574560 + L1ME3A LINE L1 5899 6166 -4 1641 170 3 66 chr17 31930015 31930157 -57574396 + AluJo SINE Alu 5 154 -158 2508 75 0 3 chr17 31930157 31930465 -57574088 + AluY SINE Alu 1 307 -4 1641 170 3 66 chr17 31930465 31930539 -57574014 + AluJo SINE Alu 154 197 -115 2568 53 0 0 chr17 31930539 31930840 -57573713 - AluY SINE Alu -10 301 1 1641 170 3 66 chr17 31930840 31930940 -57573613 + AluJo SINE Alu 197 302 -10 2143 145 3 0 chr17 31930949 31931260 -57573293 + AluSx SINE Alu 1 312 0 2300 88 0 7 chr17 31931818 31932113 -57572440 - AluSg SINE Alu -17 293 1 2346 114 0 0 chr17 31932167 31932474 -57572079 + AluSx SINE Alu 1 307 -5 828 173 0 0 chr17 31932600 31932727 -57571826 - AluJb SINE Alu -185 127 1 1291 131 14 102 chr17 31933074 31933192 -57571361 - L1MB5 LINE L1 -1 6173 6046 2276 104 10 0 chr17 31933192 31933490 -57571063 - AluSx SINE Alu -11 301 1 1291 131 14 102 chr17 31933490 31933654 -57570899 - L1MB5 LINE L1 -128 6046 5916 1969 150 11 0 chr17 31933863 31934149 -57570404 - AluSx SINE Alu -23 289 1 1157 241 79 48 chr17 31934321 31934715 -57569838 + L2 LINE L2 2906 3311 -2 466 235 163 6 chr17 31934967 31935133 -57569420 - L2 LINE L2 -1 3312 3121 1865 106 0 44 chr17 31935138 31935412 -57569141 - AluSx SINE Alu -2 310 49 2006 138 7 0 chr17 31935415 31935697 -57568856 + AluSx SINE Alu 16 299 -13 233 136 212 0 chr17 31935705 31935771 -57568782 + MER116 DNA Mariner 1 80 0 631 219 92 88 chr17 31935772 31936023 -57568530 + MIR SINE MIR 11 262 0 2321 118 0 0 chr17 31936117 31936423 -57568130 - AluSx SINE Alu -6 306 1 1338 178 0 0 chr17 31936864 31937077 -57567476 - AluJb SINE Alu -15 297 85 256 133 0 0 chr17 31937083 31937128 -57567425 + L1MB4 LINE L1 6029 6073 -107 511 179 72 0 chr17 31937137 31937299 -57567254 + L1MA9 LINE L1 6021 6290 -22 360 107 23 199 chr17 31937312 31937401 -57567152 + L1MB4 LINE L1 6067 6127 -53 1668 181 0 27 chr17 31937401 31937699 -57566854 + AluJo SINE Alu 5 294 -18 360 107 23 199 chr17 31937699 31937740 -57566813 + L1MB4 LINE L1 6127 6174 -6 261 57 0 0 chr17 31937757 31937792 -57566761 + (T)n Simple_repeat Simple_repeat 1 35 0 381 268 89 30 chr17 31937886 31938103 -57566450 + MIR SINE MIR 28 262 0 369 162 0 0 chr17 31938123 31938191 -57566362 + A-rich Low_complexity Low_complexity 1 68 0 2641 55 0 6 chr17 31938392 31938704 -57565849 - AluY SINE Alu -1 310 1 384 300 22 56 chr17 31939330 31939510 -57565043 - MIR SINE MIR -85 177 4 188 225 28 28 chr17 31940163 31940234 -57564319 - L2 LINE L2 -181 3091 3021 496 295 10 50 chr17 31940279 31940479 -57564074 - MIR SINE MIR -51 211 20 270 205 26 26 chr17 31941797 31941875 -57562678 - MIR SINE MIR -118 144 67 2203 101 3 23 chr17 31941923 31942229 -57562324 - AluSx SINE Alu -12 300 1 265 208 0 65 chr17 31942233 31942310 -57562243 + MIR SINE MIR 66 137 -125 2378 90 3 13 chr17 31942352 31942662 -57561891 - AluSq SINE Alu -6 307 1 1956 154 7 0 chr17 31942752 31943044 -57561509 + AluJb SINE Alu 4 297 -15 334 138 0 250 chr17 31943286 31943446 -57561107 - L2 LINE L2 -17 3255 3136 2358 93 3 37 chr17 31943518 31943841 -57560712 - AluSq SINE Alu 0 313 2 2355 82 0 16 chr17 31943842 31944145 -57560408 - AluSx SINE Alu -10 302 5 396 69 0 42 chr17 31944163 31944235 -57560318 + (TTC)n Simple_repeat Simple_repeat 2 70 0 1247 135 0 35 chr17 31944238 31944421 -57560132 - AluSg/x SINE Alu 0 312 135 1648 134 112 7 chr17 31944421 31944690 -57559863 - AluSx SINE Alu -15 297 1 1247 135 0 35 chr17 31944690 31944706 -57559847 - AluSg/x SINE Alu -177 135 120 188 266 31 31 chr17 31944717 31944781 -57559772 - MIR SINE MIR -168 94 31 669 221 43 0 chr17 31945093 31945233 -57559320 + MIR SINE MIR 9 154 -108 323 222 148 62 chr17 31945722 31945884 -57558669 + MIR3 SINE MIR 18 193 -15 2347 84 3 10 chr17 31945990 31946301 -57558252 + AluY SINE Alu 1 309 -2 1521 187 30 40 chr17 31946396 31946696 -57557857 + AluJo SINE Alu 1 297 -15 1133 127 18 0 chr17 31946706 31946872 -57557681 + AluSg/x SINE Alu 137 305 -7 2140 116 25 0 chr17 31946872 31947157 -57557396 + AluSx SINE Alu 1 292 -20 445 280 53 8 chr17 31947162 31947294 -57557259 - MIR SINE MIR -7 255 118 428 341 133 0 chr17 31947517 31947690 -57556863 - MER91A DNA MER1_type 0 196 1 450 373 18 14 chr17 31947736 31947953 -57556600 + MIR SINE MIR 13 230 -32 1927 146 0 70 chr17 31948345 31948675 -57555878 - AluJb SINE Alu -5 307 1 556 219 91 106 chr17 31948676 31948704 -57555849 - MLT1K LTR MaLR -11 577 550 2194 120 0 0 chr17 31948704 31949030 -57555523 - AluSx SINE Alu 0 326 1 556 219 91 106 chr17 31949030 31949397 -57555156 - MLT1K LTR MaLR -38 550 187 476 306 124 26 chr17 31949527 31949720 -57554833 - MIR SINE MIR -17 245 34 1156 174 13 65 chr17 31949899 31950129 -57554424 + MER20 DNA MER1_type 1 218 -1 1907 122 3 31 chr17 31950221 31950508 -57554045 + AluJo SINE Alu 25 303 -9 2140 118 0 65 chr17 31950889 31951212 -57553341 - AluJb SINE Alu -10 302 1 2240 106 33 0 chr17 31951224 31951525 -57553028 - AluSq SINE Alu -1 312 2 314 305 153 0 chr17 31951574 31951692 -57552861 - MER91A DNA MER1_type -36 160 25 1922 170 0 0 chr17 31951834 31952146 -57552407 - AluSx SINE Alu 0 312 1 2309 75 0 0 chr17 31952178 31952456 -57552097 - AluSg SINE Alu -32 278 1 1132 224 47 83 chr17 31953208 31953407 -57551146 - L2 LINE L2 0 3313 3108 1923 151 0 66 chr17 31953407 31953739 -57550814 + AluJb SINE Alu 1 310 -2 2424 93 0 3 chr17 31953745 31954046 -57550507 + AluSp SINE Alu 3 302 -11 1132 224 47 83 chr17 31954046 31954246 -57550307 - L2 LINE L2 -210 3103 2922 258 360 143 6 chr17 31954254 31954415 -57550138 - MER91A DNA MER1_type -13 183 1 * 407 255 137 25 chr17 31954415 31954556 -57549997 - L2 LINE L2 -383 2931 2773 973 198 72 13 chr17 31954556 31954793 -57549760 - L1MB8 LINE L1 0 6178 5928 1577 216 3 28 chr17 31954801 31955121 -57549432 - AluJo SINE Alu 0 312 1 1001 123 0 6 chr17 31955123 31955294 -57549259 - L1M4 LINE L1 -696 5488 5319 804 70 0 0 chr17 31955294 31955394 -57549159 + AluY SINE Alu 1 100 -211 547 143 9 0 chr17 31955394 31955506 -57549047 - L1M4 LINE L1 -812 5334 5222 1731 211 93 96 chr17 31955511 31955603 -57548950 - L2 LINE L2 -534 2780 2689 2217 96 7 0 chr17 31955603 31955883 -57548670 - AluSg1 SINE Alu -27 282 1 2248 128 0 0 chr17 31955885 31956181 -57548372 - AluSx SINE Alu -16 296 1 1731 211 93 96 chr17 31956181 31956733 -57547820 - L2 LINE L2 -626 2688 2135 773 231 143 26 chr17 31956733 31957215 -57547338 - MLT1H1 LTR MaLR 0 555 1 342 304 11 0 chr17 31957216 31957308 -57547245 - L2 LINE L2 -1176 2138 2046 557 183 21 5 chr17 31957391 31957640 -57546913 + L1MA4A LINE L1 5963 6283 -20 187 167 0 28 chr17 31957938 31957974 -57546579 + L3 LINE CR1 1387 1421 -156 8584 104 5 18 chr17 31958130 31958149 -57546404 - HSMAR2 DNA Mariner -7 1295 1277 2355 90 0 0 chr17 31958149 31958449 -57546104 + AluY SINE Alu 1 300 -11 8584 104 5 18 chr17 31958449 31958606 -57545947 - HSMAR2 DNA Mariner -25 1277 1119 1903 177 0 13 chr17 31958606 31958922 -57545631 - AluJb SINE Alu 0 312 1 8584 104 5 18 chr17 31958922 31958969 -57545584 - HSMAR2 DNA Mariner -183 1119 1073 2363 92 0 0 chr17 31958969 31959264 -57545289 - AluSx SINE Alu -17 295 1 8584 104 5 18 chr17 31959264 31960350 -57544203 - HSMAR2 DNA Mariner -229 1073 1 858 201 42 57 chr17 31960358 31960571 -57543982 + L1ME1 LINE L1 5902 6112 -54 2294 99 0 0 chr17 31960571 31960863 -57543690 - AluSc SINE Alu -17 292 1 858 201 42 57 chr17 31960863 31960913 -57543640 + L1ME1 LINE L1 6112 6161 -5 662 291 48 82 chr17 31960921 31961334 -57543219 + L1MC/D LINE L1 5414 5812 -1996 3885 105 30 55 chr17 31961348 31961743 -57542810 + L1PA15 LINE L1 5275 5678 -487 2412 99 3 0 chr17 31961743 31962055 -57542498 + AluSp SINE Alu 1 313 0 3885 105 30 55 chr17 31962055 31962226 -57542327 + L1PA15 LINE L1 5678 5852 -313 2104 131 0 0 chr17 31962226 31962550 -57542003 + AluSg SINE Alu 1 324 0 2298 86 30 3 chr17 31962560 31962863 -57541690 + AluSq SINE Alu 1 311 -2 3885 105 30 55 chr17 31962863 31963006 -57541547 + L1PA15 LINE L1 5861 5974 -191 1097 121 0 7 chr17 31963006 31963155 -57541398 + AluSq/x SINE Alu 1 148 -165 2006 113 0 0 chr17 31963155 31963411 -57541142 - AluSq SINE Alu -57 256 1 389 290 55 44 chr17 31964066 31964121 -57540432 + MER5A DNA MER1_type 4 57 -132 1933 145 3 29 chr17 31964121 31964454 -57540099 + AluJb SINE Alu 1 312 0 389 290 55 44 chr17 31964454 31964523 -57540030 + MER5A DNA MER1_type 57 133 -56 2516 62 0 7 chr17 31964523 31964830 -57539723 + AluY SINE Alu 1 305 -6 389 290 55 44 chr17 31964830 31964887 -57539666 + MER5A DNA MER1_type 133 188 -1 2025 113 57 7 chr17 31964888 31965170 -57539383 - AluSx SINE Alu -16 296 1 214 175 25 0 chr17 31965410 31965450 -57539103 - MIR SINE MIR -138 124 84 2341 100 3 0 chr17 31966014 31966304 -57538249 - AluSx SINE Alu -21 291 1 2019 87 54 37 chr17 31966948 31967246 -57537307 + AluY SINE Alu 1 303 -8 566 224 168 12 chr17 31967503 31967664 -57536889 + MER5A DNA MER1_type 4 189 0 2634 58 0 3 chr17 31968119 31968431 -57536122 + AluY SINE Alu 1 311 0 520 280 25 6 chr17 31969016 31969173 -57535380 + MIR3 SINE MIR 37 196 -12 265 203 18 3 chr17 31969823 31969889 -57534664 - MIR SINE MIR -71 137 84 237 356 0 0 chr17 31969884 31969957 -57534596 + MIR SINE MIR 150 222 -40 * 952 131 0 7 chr17 31970151 31970288 -57534265 - FLAM_C SINE Alu -7 136 1 2611 61 0 0 chr17 31970297 31970607 -57533946 - AluY SINE Alu -1 310 1 516 340 43 5 chr17 31970824 31971012 -57533541 - MIR3 SINE MIR -12 196 2 2204 129 0 0 chr17 31971015 31971328 -57533225 - AluSx SINE Alu 0 312 1 481 274 63 63 chr17 31971426 31971649 -57532904 + MIR SINE MIR 7 229 -33 1514 86 43 56 chr17 31972107 31972187 -57532366 - MER30 DNA MER1_type 0 230 150 2402 93 0 10 chr17 31972187 31972489 -57532064 - AluSx SINE Alu -13 299 1 1514 86 43 56 chr17 31972489 31972641 -57531912 - MER30 DNA MER1_type -80 150 1 811 289 28 32 chr17 31973509 31973764 -57530789 + MIR SINE MIR 9 262 0 * 1129 167 0 0 chr17 31973763 31973931 -57530622 - AluJo/FRAM SINE Alu -13 299 132 1634 147 3 107 chr17 31973766 31973948 -57530605 - AluJo SINE Alu -6 296 161 1704 161 0 27 chr17 31973948 31974078 -57530475 + AluJb SINE Alu 1 133 -179 2187 112 20 3 chr17 31974078 31974383 -57530170 + AluSg SINE Alu 1 310 0 1704 161 0 27 chr17 31974383 31974551 -57530002 + AluJb SINE Alu 133 291 -21 1634 147 3 107 chr17 31974551 31974694 -57529859 - AluJo SINE Alu -141 161 5 2023 127 0 16 chr17 31976067 31976383 -57528170 - AluJb SINE Alu -1 311 1 498 198 36 72 chr17 31976824 31976991 -57527562 + L1MC4 LINE L1 7427 7587 -455 451 147 0 0 chr17 31977012 31977080 -57527473 + AluS SINE Alu 231 298 -13 1592 176 21 0 chr17 31977264 31977554 -57526999 + AluJb SINE Alu 1 296 -16 262 305 49 0 chr17 31977789 31977871 -57526682 - L2 LINE L2 -46 3267 3182 375 278 104 0 chr17 31978099 31978214 -57526339 - L2 LINE L2 -220 3052 2926 1708 150 37 7 chr17 31978220 31978514 -57526039 + 7SLRNA srpRNA srpRNA 10 312 -8 691 163 207 0 chr17 31978525 31978660 -57525893 + FRAM SINE Alu 4 166 0 325 93 53 107 chr17 31978689 31978764 -57525789 - MLT2B1 LTR ERVL 0 520 450 2433 78 0 0 chr17 31978764 31979073 -57525480 + AluSc SINE Alu 1 309 0 806 196 54 0 chr17 31979074 31979222 -57525331 + AluJo/FRAM SINE Alu 136 291 -21 842 212 64 40 chr17 31979243 31979353 -57525200 - L1ME1 LINE L1 -150 6016 5910 2278 64 0 0 chr17 31979353 31979691 -57524862 - AluY SINE Alu 0 338 1 842 212 64 40 chr17 31979691 31979829 -57524724 - L1ME1 LINE L1 -256 5910 5761 330 213 0 0 chr17 31979819 31979880 -57524673 + L1ME2 LINE L1 5784 5844 -320 * 1074 175 0 6 chr17 31979910 31980093 -57524460 + LTR43 LTR ERV1 1 182 -420 2049 122 0 3 chr17 31980121 31980416 -57524137 - AluSx SINE Alu -18 294 1 3092 98 10 46 chr17 31980416 31980789 -57523764 + LTR43 LTR ERV1 150 535 -67 2010 125 0 3 chr17 31980789 31981084 -57523469 - AluSc SINE Alu -15 294 1 3092 98 10 46 chr17 31981084 31981122 -57523431 + LTR43 LTR ERV1 535 547 -55 2201 85 3 0 chr17 31981122 31981416 -57523137 - AluY SINE Alu -16 295 1 3092 98 10 46 chr17 31981416 31981471 -57523082 + LTR43 LTR ERV1 547 602 0 1249 179 60 86 chr17 31981477 31981752 -57522801 - L1ME1 LINE L1 -629 5613 5332 939 208 12 0 chr17 31981752 31981925 -57522628 - FAM SINE Alu 0 175 1 1249 179 60 86 chr17 31981925 31981953 -57522600 - L1ME1 LINE L1 -910 5332 5305 2177 66 35 7 chr17 31981953 31982239 -57522314 + AluY SINE Alu 1 294 -17 1249 179 60 86 chr17 31982239 31982355 -57522198 - L1ME1 LINE L1 -937 5305 5191 247 257 132 124 chr17 31982361 31982486 -57522067 + Charlie2 DNA MER1_type 319 442 -2420 711 158 24 31 chr17 31982486 31982613 -57521940 + FLAM_C SINE Alu 1 126 -7 247 257 132 124 chr17 31982613 31982744 -57521809 + Charlie2 DNA MER1_type 442 577 -2285 2342 84 0 6 chr17 31982758 31983069 -57521484 + AluSx SINE Alu 1 309 -3 954 165 0 0 chr17 31983110 31983274 -57521279 + AluSg/x SINE Alu 135 298 -12 2084 121 3 0 chr17 31983331 31983636 -57520917 - AluSx SINE Alu -6 306 1 1600 173 48 0 chr17 31983721 31984016 -57520537 + AluJb SINE Alu 1 309 -3 237 132 0 0 chr17 31984023 31984061 -57520492 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 957 183 25 5 chr17 31984061 31984257 -57520296 + Charlie2a DNA MER1_type 1646 1845 -1017 2266 173 82 100 chr17 31984257 31984926 -57519627 - LTR8A LTR ERV1 0 727 71 324 225 62 78 chr17 31984971 31985100 -57519453 - L1 LINE L1 -2947 3199 3073 1473 197 126 78 chr17 31985106 31985150 -57519403 + Charlie2a DNA MER1_type 1861 1901 -961 2192 62 7 36 chr17 31985150 31985457 -57519096 - AluY SINE Alu -13 298 1 1473 197 126 78 chr17 31985457 31985697 -57518856 + Charlie2a DNA MER1_type 1901 2128 -734 1787 138 28 3 chr17 31985697 31985980 -57518573 - AluSx SINE Alu -20 292 3 1473 197 126 78 chr17 31985980 31986353 -57518200 + Charlie2a DNA MER1_type 2128 2481 -381 1669 113 132 0 chr17 31986353 31986618 -57517935 - AluSg SINE Alu 0 300 1 1473 197 126 78 chr17 31986618 31986642 -57517911 + Charlie2a DNA MER1_type 2481 2502 -360 1944 82 6 75 chr17 31986642 31986960 -57517593 + AluSx SINE Alu 1 296 -16 1473 197 126 78 chr17 31986960 31986995 -57517558 + Charlie2a DNA MER1_type 2502 2615 -247 2355 70 0 10 chr17 31987028 31987341 -57517212 - AluY SINE Alu -1 310 1 235 237 17 0 chr17 31987367 31987426 -57517127 + Charlie2a DNA MER1_type 2803 2862 0 204 293 98 0 chr17 31987434 31987516 -57517037 - L2 LINE L2 -1525 1789 1700 1620 136 3 118 chr17 31987517 31987856 -57516697 - AluJb SINE Alu -2 300 1 588 252 56 22 chr17 31987996 31988338 -57516215 - MLT1I LTR MaLR -3 406 14 1739 93 28 0 chr17 31988406 31988581 -57515972 - AluSx SINE Alu 0 312 126 180 0 0 0 chr17 31988581 31988601 -57515952 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1739 93 28 0 chr17 31988601 31988673 -57515880 - AluSx SINE Alu -186 126 58 198 103 0 0 chr17 31988830 31988859 -57515694 + (T)n Simple_repeat Simple_repeat 1 29 0 508 197 55 24 chr17 31989099 31989226 -57515327 + MER5B DNA MER1_type 9 139 -39 220 344 0 11 chr17 31989577 31989667 -57514886 + G-rich Low_complexity Low_complexity 2 90 0 23 33 0 0 chr17 31990058 31990088 -57514465 + GC_rich Low_complexity Low_complexity 1 30 0 1986 142 22 65 chr17 31990394 31990438 -57514115 - L1MB4 LINE L1 -6 7593 7549 2051 101 0 26 chr17 31990438 31990745 -57513808 - AluSx SINE Alu -13 299 1 1986 142 22 65 chr17 31990745 31990756 -57513797 - L1MB4 LINE L1 -50 7549 7539 2154 61 0 55 chr17 31990756 31991066 -57513487 - AluY SINE Alu -18 293 1 1986 142 22 65 chr17 31991066 31991426 -57513127 - L1MB4 LINE L1 -60 7539 7195 2240 100 0 0 chr17 31991426 31991727 -57512826 - AluSc SINE Alu -8 301 1 3586 197 24 35 chr17 31991727 31992126 -57512427 - L1MB4 LINE L1 -734 6859 6457 1954 122 10 0 chr17 31992126 31992414 -57512139 - AluSq SINE Alu -17 296 6 3586 197 24 35 chr17 31992414 31992613 -57511940 - L1MB4 LINE L1 -1136 6457 6257 1343 147 159 8 chr17 31992613 31992865 -57511688 + AluJb SINE Alu 1 290 -12 3586 197 24 35 chr17 31992865 31993321 -57511232 - L1MB4 LINE L1 -1336 6257 5818 2105 101 7 0 chr17 31993321 31993631 -57510922 - AluSx SINE Alu 0 312 1 780 148 25 0 chr17 31993672 31993794 -57510759 + FLAM_C SINE Alu 13 137 -6 802 201 6 29 chr17 31993814 31993988 -57510565 + AluJb SINE Alu 120 289 -23 2237 87 3 0 chr17 31994658 31994957 -57509596 - AluSg SINE Alu -10 300 1 7288 131 94 18 chr17 31994958 31996021 -57508532 - L1MB4 LINE L1 -3372 4193 3212 1948 111 0 0 chr17 31996021 31996307 -57508246 - AluSx SINE Alu 0 306 21 1708 74 0 0 chr17 31996307 31996522 -57508031 - AluSq SINE Alu -97 216 1 7288 131 94 18 chr17 31996522 31997259 -57507294 - L1MB4 LINE L1 -4352 3213 2258 6240 60 18 26 chr17 31997263 31998146 -57506407 - SVA Other Other -3 1383 508 2376 70 0 0 chr17 31998320 31998621 -57505932 - AluY SINE Alu -9 302 2 2409 70 0 0 chr17 31999471 31999772 -57504781 + AluY SINE Alu 1 301 -10 292 203 165 13 chr17 31999938 32000017 -57504536 + MIR SINE MIR 85 175 -87 183 143 0 125 chr17 31999979 32000035 -57504518 - L2 LINE L2 -1084 2230 2182 * 1698 166 3 28 chr17 32000366 32000686 -57503867 + AluJb SINE Alu 1 312 0 343 167 0 17 chr17 32000954 32001014 -57503539 - AluSq SINE Alu -114 189 131 1298 245 90 79 chr17 32001024 32001689 -57502864 + L1MC4a LINE L1 5446 6121 -1687 1832 96 44 4 chr17 32001689 32001984 -57502569 - AluSx SINE Alu 0 306 1 1298 245 90 79 chr17 32001984 32001998 -57502555 + L1MC4a LINE L1 6121 6133 -1675 1974 112 56 0 chr17 32002216 32002501 -57502052 - AluSq SINE Alu -6 307 7 467 176 88 10 chr17 32002857 32002959 -57501594 - FRAM SINE Alu -22 154 45 2199 119 0 0 chr17 32003084 32003396 -57501157 + AluSx SINE Alu 1 312 0 315 301 31 0 chr17 32003396 32003543 -57501010 + MIR SINE MIR 38 188 -74 201 295 23 93 chr17 32003730 32003859 -57500694 - MIR SINE MIR -67 195 76 708 162 24 72 chr17 32004026 32004169 -57500384 + L1MB7 LINE L1 6017 6156 -28 1694 157 25 4 chr17 32004169 32004478 -57500075 + AluSx SINE Alu 1 315 0 708 162 24 72 chr17 32004478 32004498 -57500055 + L1MB7 LINE L1 6156 6175 -9 449 249 50 39 chr17 32004627 32004808 -57499745 + L1ME3A LINE L1 5988 6170 0 2556 193 67 33 chr17 32004836 32005019 -57499534 + MLT1E LTR MaLR 1 176 -417 2146 87 7 17 chr17 32005019 32005319 -57499234 + AluSq SINE Alu 1 297 -16 2556 193 67 33 chr17 32005319 32005704 -57498849 + MLT1E LTR MaLR 176 588 -5 2033 180 49 26 chr17 32005715 32006252 -57498301 - MER77 LTR ERV1 -4 601 1 822 137 0 0 chr17 32006282 32006399 -57498154 + FLAM_C SINE Alu 2 118 -25 1745 143 7 27 chr17 32007537 32007838 -57496715 - AluSx SINE Alu -17 295 1 918 236 107 18 chr17 32008065 32008391 -57496162 - MER96B DNA MER1_type? -52 365 11 244 253 66 33 chr17 32008694 32008785 -57495768 + L2 LINE L2 1696 1789 -1525 239 291 64 9 chr17 32008834 32008944 -57495609 - L1MC5 LINE L1 -535 7426 7311 * 273 304 10 10 chr17 32008928 32009030 -57495523 - L1MC4 LINE L1 -547 7495 7394 2154 75 4 0 chr17 32009183 32009496 -57495057 - AluSc SINE Alu 0 314 1 707 98 4 225 chr17 32009634 32009722 -57494831 - L1MD3 LINE L1 -2 7993 7887 1527 159 4 4 chr17 32009722 32009979 -57494574 - AluJo SINE Alu -55 257 1 707 98 4 225 chr17 32009979 32010011 -57494542 - L1MD3 LINE L1 -108 7887 7850 2030 136 10 0 chr17 32010011 32010320 -57494233 - AluSx SINE Alu 0 312 1 2111 132 3 0 chr17 32010320 32010631 -57493922 - AluSx SINE Alu 0 312 1 707 98 4 225 chr17 32010631 32010752 -57493801 - L1MD3 LINE L1 -143 7852 7804 1147 101 6 0 chr17 32010810 32010979 -57493574 - L1MB3 LINE L1 0 6183 6014 330 128 0 0 chr17 32011041 32011088 -57493465 + Alu SINE Alu 1 47 -255 180 111 0 0 chr17 32011212 32011239 -57493314 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 434 275 188 67 chr17 32011457 32011606 -57492947 - L1ME4a LINE L1 -133 5988 5858 324 0 0 0 chr17 32011606 32011642 -57492911 + (TA)n Simple_repeat Simple_repeat 2 37 0 1773 171 0 13 chr17 32011642 32011958 -57492595 - AluSp SINE Alu -1 312 1 434 275 188 67 chr17 32011958 32012153 -57492400 - L1ME4a LINE L1 -262 5859 5601 346 141 27 28 chr17 32012165 32012257 -57492296 + FAM SINE Alu 27 91 -84 294 299 45 73 chr17 32012933 32013110 -57491443 - MIR3 SINE MIR 0 208 37 2060 112 3 0 chr17 32013235 32013529 -57491024 - AluSc SINE Alu -14 295 1 262 217 72 36 chr17 32014380 32014463 -57490090 - MIR SINE MIR -4 258 173 744 289 22 30 chr17 32014491 32014723 -57489830 + MIR SINE MIR 33 262 0 378 256 176 16 chr17 32014737 32014862 -57489691 - MIR SINE MIR -105 157 13 2134 85 16 13 chr17 32015174 32015479 -57489074 + AluSg SINE Alu 1 306 -4 1140 81 0 0 chr17 32015745 32015894 -57488659 + AluSc SINE Alu 3 151 -158 306 314 29 0 chr17 32015997 32016099 -57488454 - LTR67 LTR ERVL -51 506 402 693 288 89 8 chr17 32016479 32016715 -57487838 - MIR SINE MIR 0 262 8 207 146 0 0 chr17 32017475 32017516 -57487037 + (A)n Simple_repeat Simple_repeat 1 41 0 193 29 59 0 chr17 32017764 32017798 -57486755 + (TA)n Simple_repeat Simple_repeat 1 36 0 1603 160 25 0 chr17 32017799 32018081 -57486472 - AluJo SINE Alu -23 289 1 262 313 83 10 chr17 32018321 32018417 -57486136 + MIR SINE MIR 48 150 -58 563 232 36 7 chr17 32018866 32019004 -57485549 - MIR SINE MIR -86 176 35 2185 110 3 0 chr17 32019381 32019689 -57484864 - AluSx SINE Alu -3 309 1 324 0 0 0 chr17 32019892 32019928 -57484625 + (T)n Simple_repeat Simple_repeat 1 36 0 322 51 0 0 chr17 32019928 32019967 -57484586 - MER57B LTR ERV1 -66 368 330 490 269 139 66 chr17 32020029 32020401 -57484152 + LTR16A1 LTR ERVL 74 452 -5 436 323 0 12 chr17 32020744 32020908 -57483645 + (CA)n Simple_repeat Simple_repeat 2 163 0 1917 145 0 0 chr17 32021302 32021620 -57482933 - AluSx SINE Alu 0 318 1 322 341 61 8 chr17 32022016 32022148 -57482405 - MIR SINE MIR -29 233 95 1837 117 4 4 chr17 32022250 32022523 -57482030 + AluSp SINE Alu 37 309 -4 811 266 42 21 chr17 32022701 32022942 -57481611 - MIR SINE MIR -1 261 16 255 294 37 37 chr17 32023320 32023456 -57481097 + LTR67 LTR ERVL 410 545 -12 1991 146 0 0 chr17 32023883 32024170 -57480383 + AluSx SINE Alu 24 310 -2 1441 146 48 54 chr17 32025021 32025315 -57479238 + AluJb SINE Alu 6 297 -15 2136 149 79 28 chr17 32025343 32025771 -57478782 - L1MB8 LINE L1 -6 6172 5723 922 181 7 0 chr17 32025882 32026037 -57478516 + AluSg/x SINE Alu 140 295 -17 2142 106 0 0 chr17 32026040 32026365 -57478188 + AluSg SINE Alu 1 325 0 524 132 0 0 chr17 32026857 32026933 -57477620 - MLT1A1 LTR MaLR 0 365 290 1638 174 17 11 chr17 32026933 32027220 -57477333 + AluJb SINE Alu 1 289 -23 398 143 13 0 chr17 32027220 32027297 -57477256 + GA-rich Low_complexity Low_complexity 1 78 0 258 136 0 0 chr17 32027291 32027335 -57477218 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 * 782 126 66 56 chr17 32027339 32027446 -57477107 - MLT1A1 LTR MaLR -55 341 237 2054 106 0 24 chr17 32027446 32027738 -57476815 - AluSx SINE Alu -5 307 23 782 126 66 56 chr17 32027738 32027873 -57476680 - MLT1A1 LTR MaLR -159 237 2 2114 117 10 3 chr17 32028244 32028544 -57476009 - AluSx SINE Alu -10 302 1 29 28 0 0 chr17 32028544 32028580 -57475973 + AT_rich Low_complexity Low_complexity 1 36 0 1993 107 3 21 chr17 32028580 32028870 -57475683 - AluY SINE Alu -26 285 1 867 112 17 28 chr17 32029465 32029643 -57474910 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 2293 69 0 50 chr17 32029901 32030221 -57474332 - AluY SINE Alu -7 304 1 1342 154 222 18 chr17 32030725 32031004 -57473549 - MER44D DNA MER2_type -3 606 1 300 200 0 0 chr17 32033860 32033915 -57470638 - MER5B DNA MER1_type -123 55 1 439 230 31 123 chr17 32034746 32035007 -57469546 + LTR67 LTR ERVL 3 239 -318 2277 106 0 0 chr17 32035014 32035315 -57469238 + AluSx SINE Alu 1 301 -11 438 20 0 0 chr17 32035435 32035486 -57469067 + (TC)n Simple_repeat Simple_repeat 2 52 0 337 171 0 0 chr17 32035502 32035569 -57468984 - L1MA9 LINE L1 -166 6125 6059 248 226 48 0 chr17 32035668 32035730 -57468823 + LTR67 LTR ERVL 493 557 0 440 292 7 14 chr17 32035814 32035958 -57468595 + MIR SINE MIR 10 152 -110 731 58 0 0 chr17 32035959 32036045 -57468508 - AluS SINE Alu -225 87 2 182 250 23 0 chr17 32036252 32036296 -57468257 - L2 LINE L2 -14 3299 3255 352 326 23 125 chr17 32036658 32036803 -57467750 - L2 LINE L2 -14 3258 3100 2134 119 0 10 chr17 32036803 32037098 -57467455 + AluSc SINE Alu 1 292 -17 352 326 23 125 chr17 32037098 32037345 -57467208 - L2 LINE L2 -172 3100 2906 955 303 52 26 chr17 32037486 32037872 -57466681 - MLT1J2 LTR MaLR 0 450 55 2360 69 0 30 chr17 32038663 32038968 -57465585 + AluY SINE Alu 1 296 -15 349 233 27 0 chr17 32039243 32039316 -57465237 - MIR SINE MIR -165 97 23 2102 71 0 99 chr17 32039484 32039807 -57464746 - AluSc SINE Alu -18 291 1 2282 171 63 8 chr17 32041099 32041549 -57463004 + MLT1D LTR MaLR 41 505 0 1856 159 3 3 chr17 32041798 32042088 -57462465 + AluSx SINE Alu 1 290 -22 225 119 0 0 chr17 32042610 32042652 -57461901 + (CA)n Simple_repeat Simple_repeat 2 43 0 2348 80 10 0 chr17 32042731 32043033 -57461520 - AluSq SINE Alu -8 305 1 1993 114 24 0 chr17 32043749 32044038 -57460515 - AluY SINE Alu -15 296 1 4093 113 7 42 chr17 32044333 32045283 -57459270 - L1PB4 LINE L1 0 6156 5254 1895 151 0 27 chr17 32045314 32045613 -57458940 - AluJb SINE Alu -21 291 1 29 28 0 0 chr17 32045613 32045649 -57458904 + AT_rich Low_complexity Low_complexity 1 36 0 2304 140 9 6 chr17 32046760 32047096 -57457457 - MER1B DNA MER1_type 0 337 1 1082 197 38 50 chr17 32047230 32047469 -57457084 + MIR SINE MIR 8 243 -19 191 35 0 35 chr17 32047511 32047540 -57457013 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1475 236 89 114 chr17 32048543 32048767 -57455786 - HAL1 LINE L1 0 2507 2279 2221 124 0 0 chr17 32048767 32049066 -57455487 - AluSx SINE Alu -13 299 1 1475 236 89 114 chr17 32049066 32049143 -57455410 - HAL1 LINE L1 -228 2279 2202 1606 174 7 44 chr17 32049143 32049436 -57455117 - AluJo SINE Alu -30 282 1 1475 236 89 114 chr17 32049436 32050142 -57454411 - HAL1 LINE L1 -305 2202 1524 501 145 0 103 chr17 32050149 32050266 -57454287 - Charlie5 DNA MER1_type 0 2622 2518 675 168 9 0 chr17 32050267 32050374 -57454179 + FLAM_A SINE Alu 2 109 -33 522 181 51 134 chr17 32050434 32050688 -57453865 - MER33 DNA MER1_type -249 75 1 604 179 26 22 chr17 32050757 32050894 -57453659 - L1M4 LINE L1 -676 5475 5357 497 246 8 31 chr17 32051778 32051908 -57452645 - MLT1K LTR MaLR -15 573 447 2314 78 0 32 chr17 32052420 32052729 -57451824 - AluY SINE Alu -12 299 1 28 79 0 0 chr17 32052865 32052928 -57451625 + AT_rich Low_complexity Low_complexity 1 63 0 264 59 0 0 chr17 32053250 32053284 -57451269 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 146 0 42 chr17 32053287 32053335 -57451218 + L1MC4 LINE L1 6658 6703 -1339 222 264 138 23 chr17 32054439 32054526 -57450027 - L2 LINE L2 -8 3305 3209 199 143 184 0 chr17 32054783 32054832 -57449721 - L2 LINE L2 -8 3305 3248 240 308 162 0 chr17 32054977 32055094 -57449459 - MIR SINE MIR -79 183 48 381 250 191 18 chr17 32055172 32055340 -57449213 - MIR SINE MIR 0 262 66 2276 105 3 10 chr17 32056236 32056550 -57448003 + AluSq SINE Alu 2 313 0 3398 107 97 16 chr17 32056756 32057243 -57447310 - MER1A DNA MER1_type 0 527 2 2200 114 3 0 chr17 32057497 32057787 -57446766 + AluSp SINE Alu 1 291 -22 180 111 0 0 chr17 32057860 32057887 -57446666 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 5463 81 33 11 chr17 32057940 32058733 -57445820 - SVA Other Other -520 866 57 297 0 0 0 chr17 32058733 32058766 -57445787 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 5384 139 43 9 chr17 32058788 32060088 -57444465 - L1M1 LINE L1 -5272 2293 11 484 164 11 8 chr17 32060130 32060224 -57444329 - L1MB3 LINE L1 -47 6136 6049 2590 150 47 7 chr17 32060252 32060699 -57443854 - L1MB2 LINE L1 -110 6061 5597 710 115 10 0 chr17 32060733 32060837 -57443716 - AluSg/x SINE Alu -7 305 201 1841 102 0 0 chr17 32060940 32061185 -57443368 - AluSq SINE Alu -14 299 55 2163 112 7 0 chr17 32062829 32063123 -57441430 - AluSx SINE Alu -16 296 1 24 0 0 0 chr17 32063174 32063198 -57441355 + AT_rich Low_complexity Low_complexity 1 24 0 335 190 0 13 chr17 32063209 32063288 -57441265 + (TA)n Simple_repeat Simple_repeat 1 78 0 1084 130 57 0 chr17 32063288 32063465 -57441088 - AluSq SINE Alu -7 306 120 28 29 0 0 chr17 32063638 32063673 -57440880 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 32064087 32064108 -57440445 + AT_rich Low_complexity Low_complexity 1 21 0 530 230 61 70 chr17 32064369 32064505 -57440048 + MER2 DNA MER2_type 1 136 -209 1400 185 141 22 chr17 32064505 32064775 -57439778 - AluJo SINE Alu 0 302 1 530 230 61 70 chr17 32064775 32064851 -57439702 + MER2 DNA MER2_type 136 211 -134 2131 35 4 23 chr17 32065055 32065314 -57439239 + SVA Other Other 1133 1386 0 1036 172 91 10 chr17 32065352 32065561 -57438992 + AluJo SINE Alu 82 307 -5 750 265 53 71 chr17 32065580 32066029 -57438524 + L1M4 LINE L1 4177 4617 -1529 816 164 0 0 chr17 32066040 32066156 -57438397 - AluJb SINE Alu -25 287 172 2161 120 10 0 chr17 32066234 32066543 -57438010 - AluSx SINE Alu 0 312 1 715 85 0 21 chr17 32067084 32067178 -57437375 + AluS SINE Alu 2 93 -219 1655 115 58 0 chr17 32067183 32067426 -57437127 - AluSq SINE Alu -56 257 1 971 124 13 20 chr17 32067548 32067701 -57436852 - AluSx SINE Alu -159 153 2 185 300 0 33 chr17 32067794 32067854 -57436699 + MIR SINE MIR 93 150 -58 1124 208 33 0 chr17 32068291 32068503 -57436050 - MER20 DNA MER1_type 0 219 1 556 248 23 8 chr17 32069492 32069621 -57434932 + MER5A DNA MER1_type 37 167 -22 218 333 82 34 chr17 32069976 32070123 -57434430 + L2 LINE L2 3160 3313 0 2161 102 0 0 chr17 32070127 32070451 -57434102 + AluY SINE Alu 1 324 0 809 219 59 16 chr17 32071109 32071296 -57433257 - MER58C DNA MER1_type -10 205 11 277 297 0 68 chr17 32071474 32071592 -57432961 - MIR3 SINE MIR -3 205 96 705 208 0 0 chr17 32071851 32072079 -57432474 + (CA)n Simple_repeat Simple_repeat 1 228 0 276 30 0 0 chr17 32072344 32072377 -57432176 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 718 183 9 0 chr17 32072379 32072494 -57432059 - FLAM_C SINE Alu -17 116 1 265 242 121 81 chr17 32072494 32072643 -57431910 - L1ME3 LINE L1 -47 6115 5961 2055 145 0 0 chr17 32072674 32072971 -57431582 + AluSq SINE Alu 1 297 -16 1467 119 0 0 chr17 32072971 32073165 -57431388 - AluSq SINE Alu -114 199 6 407 289 213 57 chr17 32073316 32073879 -57430674 + L1MC4a LINE L1 5284 5934 -1874 1796 177 3 13 chr17 32074066 32074376 -57430177 + AluJb SINE Alu 1 307 -5 194 91 30 0 chr17 32075284 32075317 -57429236 + A-rich Low_complexity Low_complexity 5 38 0 882 222 102 0 chr17 32075681 32075906 -57428647 - MIR SINE MIR -2 260 13 1974 87 50 43 chr17 32075963 32076263 -57428290 + AluSp SINE Alu 1 302 -11 1318 142 5 0 chr17 32080597 32080801 -57423752 - AluJo SINE Alu -107 205 1 1213 181 9 22 chr17 32080806 32081033 -57423520 + MLT1F1 LTR MaLR 344 567 0 510 277 47 0 chr17 32081054 32081202 -57423351 - L3 LINE CR1 -187 1390 1236 348 302 131 48 chr17 32081208 32081499 -57423054 - L2 LINE L2 -5 3267 2953 497 346 87 11 chr17 32081534 32081889 -57422664 - L3 LINE CR1 -354 1223 842 500 318 109 14 chr17 32082532 32082743 -57421810 - L2 LINE L2 -1 3271 3041 476 261 19 50 chr17 32082771 32082932 -57421621 - MIR SINE MIR 0 262 107 1608 178 7 3 chr17 32082942 32083234 -57421319 + AluJb SINE Alu 5 297 -15 1841 143 7 0 chr17 32083236 32083523 -57421030 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr17 32083530 32083552 -57421001 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 340 198 43 58 chr17 32083641 32083735 -57420818 + MER91B DNA MER1_type 1 91 -49 585 99 12 0 chr17 32083870 32083951 -57420602 - AluS SINE Alu -229 83 2 2683 167 16 58 chr17 32083951 32084845 -57419708 - L1M3 LINE L1 -575 5608 4758 1522 293 100 72 chr17 32085256 32086514 -57418039 + L2 LINE L2 1864 3172 -100 1947 100 50 0 chr17 32086514 32086793 -57417760 - AluSg SINE Alu -17 293 1 1522 293 100 72 chr17 32086793 32086898 -57417655 + L2 LINE L2 3172 3272 0 617 212 82 38 chr17 32086935 32087119 -57417434 + MIR SINE MIR 30 221 -41 285 262 184 64 chr17 32087148 32087289 -57417264 + MIR SINE MIR 94 251 -11 1967 133 0 10 chr17 32087530 32087830 -57416723 - AluSx SINE Alu -15 297 1 337 235 29 37 chr17 32087925 32088061 -57416492 - L1ME4a LINE L1 -4 6117 5983 2307 84 3 0 chr17 32088715 32089024 -57415529 - AluY SINE Alu -1 310 1 511 127 0 0 chr17 32089073 32089152 -57415401 - AluSx SINE Alu -5 304 226 327 122 0 8 chr17 32089153 32089203 -57415350 - AluSx SINE Alu -136 164 122 276 100 0 0 chr17 32089203 32089243 -57415310 + (T)n Simple_repeat Simple_repeat 1 40 0 1098 233 5 5 chr17 32090572 32090791 -57413762 + MIR SINE MIR 2 220 -42 861 170 0 0 chr17 32090958 32091105 -57413448 - AluSx SINE Alu -166 147 1 682 179 0 64 chr17 32091153 32091293 -57413260 + FLAM_C SINE Alu 3 133 0 768 123 0 0 chr17 32091296 32091410 -57413143 - L1MA5A LINE L1 -17 6280 6167 1786 104 12 0 chr17 32091511 32091761 -57412792 - AluSq SINE Alu -60 253 1 238 289 0 8 chr17 32091809 32091937 -57412616 - L1M4 LINE L1 -832 5314 5188 1981 127 3 7 chr17 32091982 32092281 -57412272 - AluSp SINE Alu -15 298 1 787 192 0 0 chr17 32092289 32092414 -57412139 - FLAM_C SINE Alu -17 126 2 235 105 0 197 chr17 32092419 32092495 -57412058 - Alu SINE Alu -2 300 240 1496 208 7 10 chr17 32092514 32092812 -57411741 - AluJo SINE Alu -3 299 3 329 250 30 140 chr17 32092812 32093048 -57411505 - L1M4 LINE L1 -949 5197 4988 2016 105 0 38 chr17 32093073 32093418 -57411135 - AluSx SINE Alu 0 312 1 632 186 8 24 chr17 32093423 32093547 -57411006 - FLAM_C SINE Alu -16 127 6 180 0 0 0 chr17 32093850 32093870 -57410683 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1684 142 39 3 chr17 32093870 32094152 -57410401 - AluJb SINE Alu -20 292 1 361 147 0 40 chr17 32094236 32094311 -57410242 - L1MB2 LINE L1 0 6171 6100 1855 133 0 23 chr17 32094312 32094614 -57409939 + AluSx SINE Alu 4 298 -14 715 173 0 24 chr17 32094614 32094741 -57409812 - FLAM_A SINE Alu -8 125 2 1318 161 22 0 chr17 32094741 32094964 -57409589 - L1MB2 LINE L1 -119 6052 5825 2033 99 14 17 chr17 32094969 32095137 -57409416 - AluSx SINE Alu -17 295 127 207 0 0 0 chr17 32095137 32095160 -57409393 + (TG)n Simple_repeat Simple_repeat 2 24 0 2033 99 14 17 chr17 32095160 32095285 -57409268 - AluSx SINE Alu -185 127 3 2153 108 3 0 chr17 32095299 32095596 -57408957 - AluSg SINE Alu -10 300 3 2716 171 21 58 chr17 32095698 32095780 -57408773 - L1MB2 LINE L1 -743 5403 5320 2159 92 0 0 chr17 32095780 32096083 -57408470 - AluSx SINE Alu 0 303 1 1784 147 7 3 chr17 32096093 32096378 -57408175 - AluSx SINE Alu -26 286 1 2716 171 21 58 chr17 32096378 32096900 -57407653 - L1MB2 LINE L1 -835 5311 4810 1971 142 0 3 chr17 32096900 32097211 -57407342 - AluSx SINE Alu -2 310 1 2716 171 21 58 chr17 32097211 32097250 -57407303 - L1MB2 LINE L1 -1336 4810 4771 2377 82 0 0 chr17 32097258 32097564 -57406989 - AluY SINE Alu -5 306 1 545 310 7 0 chr17 32097740 32097885 -57406668 + Charlie7 DNA MER1_type 228 373 -2239 * 1291 205 91 86 chr17 32097881 32098138 -57406415 + Charlie7 DNA MER1_type 1644 1898 -714 2148 97 6 6 chr17 32098138 32098449 -57406104 + AluY SINE Alu 1 311 0 1291 205 91 86 chr17 32098449 32098682 -57405871 + Charlie7 DNA MER1_type 1898 2140 -472 2075 104 0 16 chr17 32098682 32098990 -57405563 + AluSx SINE Alu 1 303 -9 1291 205 91 86 chr17 32098990 32099083 -57405470 + Charlie7 DNA MER1_type 2140 2231 -381 905 181 0 0 chr17 32099090 32099273 -57405280 + AluSg/x SINE Alu 130 312 0 2208 100 0 3 chr17 32099330 32099629 -57404924 + AluSx SINE Alu 1 298 -14 1079 124 6 0 chr17 32099629 32099790 -57404763 + AluSg/x SINE Alu 134 295 -17 34 65 0 0 chr17 32099831 32099893 -57404660 + AT_rich Low_complexity Low_complexity 1 62 0 24 67 0 0 chr17 32099941 32099986 -57404567 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr17 32100050 32100076 -57404477 + AT_rich Low_complexity Low_complexity 1 26 0 638 292 42 25 chr17 32100254 32100490 -57404063 + MIR SINE MIR 9 248 -14 2162 115 3 0 chr17 32100969 32101273 -57403280 + AluSq SINE Alu 1 305 -8 1716 179 17 0 chr17 32101346 32101642 -57402911 + AluSx SINE Alu 10 310 -2 550 236 36 30 chr17 32102036 32102201 -57402352 - MLT1J LTR MaLR -4 507 342 292 274 14 0 chr17 32102293 32102366 -57402187 - ERVL LTR ERVL -1490 4274 4201 614 231 13 64 chr17 32102426 32102582 -57401971 - ERVL LTR ERVL -2739 2257 2110 485 194 117 0 chr17 32102611 32102714 -57401839 - ERVL LTR ERVL -3194 1802 1688 791 293 95 11 chr17 32102743 32103026 -57401527 - ERVL LTR ERVL -3442 1554 1248 2529 288 55 39 chr17 32103064 32103367 -57401186 - ERVL LTR ERVL -3824 1172 875 2162 75 3 20 chr17 32103367 32103661 -57400892 - AluY SINE Alu -22 289 1 2529 288 55 39 chr17 32103661 32104461 -57400092 - ERVL LTR ERVL -4121 875 51 1653 176 3 0 chr17 32104497 32104786 -57399767 - AluJb SINE Alu -22 290 1 541 244 166 28 chr17 32104804 32105096 -57399457 - LTR16A LTR ERVL -72 378 34 1573 145 17 54 chr17 32105187 32105519 -57399034 - AluJb SINE Alu 0 321 1 968 262 44 0 chr17 32105727 32105952 -57398601 + Charlie8 DNA MER1_type 10 244 -2173 1813 122 7 43 chr17 32106034 32106337 -57398216 - AluSx SINE Alu -20 292 1 1766 159 3 16 chr17 32106424 32106732 -57397821 - AluJb SINE Alu -8 304 1 1504 157 17 34 chr17 32107654 32107948 -57396605 + AluJo SINE Alu 7 295 -17 2304 81 3 0 chr17 32108003 32108301 -57396252 + AluSg SINE Alu 1 299 -11 241 333 30 0 chr17 32108474 32108540 -57396013 + MIR SINE MIR 35 102 -160 287 336 0 0 chr17 32109502 32109615 -57394938 + C-rich Low_complexity Low_complexity 1 113 0 201 302 21 10 chr17 32109646 32109742 -57394811 + C-rich Low_complexity Low_complexity 5 101 0 246 62 0 0 chr17 32109922 32109954 -57394599 + (GGGAA)n Simple_repeat Simple_repeat 2 33 0 34 55 0 0 chr17 32111496 32111551 -57393002 + AT_rich Low_complexity Low_complexity 1 55 0 2390 72 0 3 chr17 32111621 32111925 -57392628 + AluSx SINE Alu 1 303 -9 2253 83 0 3 chr17 32112714 32113015 -57391538 - AluSq SINE Alu -13 300 1 21 36 0 0 chr17 32113162 32113190 -57391363 + AT_rich Low_complexity Low_complexity 1 28 0 274 122 0 0 chr17 32113623 32113664 -57390889 - U6 snRNA snRNA -66 41 1 26 30 0 0 chr17 32113688 32113721 -57390832 + AT_rich Low_complexity Low_complexity 1 33 0 2128 99 3 7 chr17 32113721 32114023 -57390530 - AluSc SINE Alu -8 301 1 281 312 65 39 chr17 32114470 32114624 -57389929 + MIR3 SINE MIR 51 208 0 215 396 51 9 chr17 32114659 32114876 -57389677 + L2 LINE L2 2810 3035 -237 283 206 55 27 chr17 32165084 32165157 -57339396 - MLT1F1 LTR MaLR -184 383 309 2502 61 0 0 chr17 32165894 32166189 -57338364 + AluY SINE Alu 1 295 -16 1856 140 3 33 chr17 32166533 32166549 -57338004 - AluJb SINE Alu -13 299 284 297 51 0 0 chr17 32166549 32166588 -57337965 + (CA)n Simple_repeat Simple_repeat 1 39 0 1856 140 3 33 chr17 32166588 32166878 -57337675 - AluJb SINE Alu -28 284 2 2475 77 0 6 chr17 32167117 32167430 -57337123 - AluY SINE Alu 0 311 1 367 257 108 77 chr17 32167477 32167699 -57336854 + L2 LINE L2 2525 2753 -561 824 272 120 38 chr17 32167710 32168258 -57336295 - MLT1H1 LTR MaLR -2 553 1 622 230 42 150 chr17 32168265 32168514 -57336039 + L2 LINE L2 2762 2963 -350 1885 113 18 15 chr17 32168514 32168788 -57335765 - AluSx SINE Alu -26 286 12 622 230 42 150 chr17 32168788 32168883 -57335670 + L2 LINE L2 2963 3067 -246 578 342 117 7 chr17 32169012 32169319 -57335234 - L2 LINE L2 -744 2570 2230 1134 171 32 0 chr17 32169319 32169536 -57335017 - MLT1E1 LTR MaLR 0 654 431 678 207 35 0 chr17 32169537 32169682 -57334871 - HERV16 LTR ERVL -4377 619 470 468 0 0 0 chr17 32169717 32169769 -57334784 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 584 191 88 0 chr17 32169811 32169947 -57334606 - HERV16 LTR ERVL -4537 459 312 768 221 86 89 chr17 32169975 32170301 -57334252 - LTR16A LTR ERVL -124 326 2 1671 242 102 8 chr17 32170386 32170982 -57333571 - L1ME3A LINE L1 -5 6165 5514 857 207 28 116 chr17 32171529 32171960 -57332593 - L1MC5 LINE L1 -897 6911 6547 519 263 160 65 chr17 32172007 32172502 -57332051 - L1MC4a LINE L1 -1465 6343 5802 312 27 0 0 chr17 32172588 32172625 -57331928 + (CA)n Simple_repeat Simple_repeat 2 38 0 1399 130 19 5 chr17 32172625 32172832 -57331721 - AluSg/x SINE Alu -24 288 79 2043 229 22 39 chr17 32172906 32173390 -57331163 - MLT2E LTR ERVL -51 577 103 984 176 124 0 chr17 32173390 32173600 -57330953 - MER46A DNA MER2_type 0 236 1 2043 229 22 39 chr17 32173600 32173700 -57330853 - MLT2E LTR ERVL -525 103 3 2305 106 0 10 chr17 32174060 32174371 -57330182 + AluSx SINE Alu 1 308 -4 1348 189 110 0 chr17 32174373 32174674 -57329879 + MER7A DNA MER2_type 1 332 -14 807 312 94 83 chr17 32174728 32174822 -57329731 - L1M4c LINE L1 -727 1400 1309 1670 171 71 6 chr17 32174822 32175144 -57329409 + MER2 DNA MER2_type 2 344 0 807 312 94 83 chr17 32175144 32175192 -57329361 - L1M4c LINE L1 -818 1309 1263 1666 35 0 0 chr17 32175192 32175390 -57329163 - L1PA5 LINE L1 -2 6152 5955 807 312 94 83 chr17 32175390 32176157 -57328396 - L1M4c LINE L1 -864 1263 55 581 239 9 100 chr17 32176474 32176704 -57327849 - MER3 DNA MER1_type 0 209 1 1623 157 49 14 chr17 32176930 32177216 -57327337 - AluJo SINE Alu -10 302 7 2202 103 20 3 chr17 32177362 32177664 -57326889 - AluSx SINE Alu -5 307 1 2001 117 34 0 chr17 32178035 32178333 -57326220 - AluSc SINE Alu -1 308 1 267 31 0 0 chr17 32180282 32180314 -57324239 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 2039 118 0 7 chr17 32180314 32180594 -57323959 - AluSx SINE Alu -34 278 1 496 204 41 0 chr17 32180689 32180787 -57323766 - LTR37B LTR ERV1 -360 108 7 1924 123 62 54 chr17 32180796 32180983 -57323570 - L1MA5A LINE L1 0 6297 6113 2240 77 3 27 chr17 32180983 32181282 -57323271 + AluY SINE Alu 1 292 -19 1924 123 62 54 chr17 32181282 32181499 -57323054 - L1MA5A LINE L1 -184 6113 5890 25 0 0 0 chr17 32183067 32183092 -57321461 + AT_rich Low_complexity Low_complexity 1 25 0 1745 179 0 7 chr17 32183400 32183691 -57320862 - AluSx SINE Alu -20 292 4 2138 133 0 0 chr17 32185060 32185368 -57319185 + AluSx SINE Alu 1 308 -4 1996 85 0 0 chr17 32185502 32185750 -57318803 + AluSq SINE Alu 1 248 -65 284 222 70 35 chr17 32185789 32185960 -57318593 + L1MC5 LINE L1 7546 7722 -239 362 194 24 12 chr17 32186781 32186870 -57317683 - AluJb SINE Alu -73 229 173 212 0 36 0 chr17 32187186 32187214 -57317339 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 319 260 221 32 chr17 32187346 32187500 -57317053 - MIR SINE MIR -78 184 2 1967 138 0 10 chr17 32188995 32189300 -57315253 - AluJo SINE Alu -10 302 1 254 277 0 15 chr17 32189420 32189485 -57315068 - L1MEd LINE L1 -6050 69 6 678 274 113 81 chr17 32189594 32190250 -57314303 - L1MEd LINE L1 -5298 821 145 308 219 95 19 chr17 32191168 32191273 -57313280 - L2 LINE L2 -82 3231 3119 1270 234 86 94 chr17 32191552 32192704 -57311849 - L1MC5 LINE L1 -167 7794 6652 1886 166 3 7 chr17 32192848 32193150 -57311403 - AluJo SINE Alu -8 304 4 281 367 58 0 chr17 32195096 32195216 -57309337 - L2 LINE L2 -8 3305 3179 1508 141 91 19 chr17 32195373 32195636 -57308917 + AluJo SINE Alu 1 282 -30 345 62 0 0 chr17 32195638 32195686 -57308867 + (TC)n Simple_repeat Simple_repeat 1 48 0 237 279 0 0 chr17 32195687 32195773 -57308780 + (TA)n Simple_repeat Simple_repeat 2 87 0 504 315 87 42 chr17 32195788 32196029 -57308524 - MIR SINE MIR -10 252 1 2026 112 3 48 chr17 32196298 32196433 -57308120 + AluSq SINE Alu 1 140 -173 2343 82 20 0 chr17 32196433 32196736 -57307817 + AluY SINE Alu 1 309 -2 2026 112 3 48 chr17 32196736 32196914 -57307639 + AluSq SINE Alu 140 300 -13 618 275 59 18 chr17 32197637 32197859 -57306694 + L1ME4a LINE L1 5518 5748 -373 201 324 0 54 chr17 32197935 32198009 -57306544 + MIR SINE MIR 41 111 -97 2395 92 3 0 chr17 32198126 32198431 -57306122 + AluSg SINE Alu 1 306 -4 297 229 153 28 chr17 32198469 32198613 -57305940 + L1ME4a LINE L1 5878 6039 -82 841 224 6 0 chr17 32198645 32198810 -57305743 - FRAM SINE Alu 0 166 1 6511 69 21 0 chr17 32198829 32200467 -57304086 - L1PA7 LINE L1 -4 6150 4488 25278 92 21 15 chr17 32200469 32202893 -57301660 + L1P LINE L1 748 3203 -2943 1532 85 0 5 chr17 32202893 32203092 -57301461 + AluY SINE Alu 98 295 -16 25278 92 21 15 chr17 32203092 32204446 -57300107 + L1P LINE L1 3203 4548 -1598 188 362 59 53 chr17 32206627 32206779 -57297774 + L3 LINE CR1 1394 1546 -31 3383 63 16 2 chr17 32206883 32207311 -57297242 + MLT2A1 LTR ERVL 3 436 -8 7687 60 3 26 chr17 32207315 32207664 -57296889 + HERVL-A1 LTR ERVL 1 356 -5298 2626 29 7 3 chr17 32207664 32207974 -57296579 + AluY SINE Alu 1 311 0 7687 60 3 26 chr17 32207974 32208630 -57295923 + HERVL-A1 LTR ERVL 356 983 -4671 * 23060 63 21 8 chr17 32208625 32210494 -57294059 + HERVL-A1 LTR ERVL 2664 4590 -1064 2236 91 7 0 chr17 32210494 32210791 -57293762 - AluSc SINE Alu -10 299 1 23060 63 21 8 chr17 32210791 32211871 -57292682 + HERVL-A1 LTR ERVL 4590 5654 0 3504 70 0 0 chr17 32211871 32212315 -57292238 + MLT2A1 LTR ERVL 1 444 0 1282 166 35 35 chr17 32212670 32212954 -57291599 - L1MB7 LINE L1 -16 6168 5885 2362 82 3 3 chr17 32213055 32213358 -57291195 - AluSp SINE Alu -10 303 1 1167 132 11 5 chr17 32213393 32213582 -57290971 + AluSg/x SINE Alu 121 310 -2 587 335 52 24 chr17 32213738 32214197 -57290356 - L1MC4a LINE L1 -1902 5906 5435 911 99 7 0 chr17 32214230 32214372 -57290181 + L1MA9 LINE L1 6170 6312 0 1637 228 55 7 chr17 32214605 32215009 -57289544 + L1ME1 LINE L1 5662 6084 -82 345 261 73 24 chr17 32215116 32215298 -57289255 - L1MC4a LINE L1 -716 5450 5262 5417 71 24 12 chr17 32215470 32216227 -57288326 - MER4E LTR ERV1 0 766 1 654 215 128 29 chr17 32216409 32216581 -57287972 + MER5A DNA MER1_type 1 189 0 619 175 8 42 chr17 32216649 32216769 -57287784 - FLAM_A SINE Alu -17 116 1 6105 121 39 6 chr17 32216842 32216967 -57287586 + L1MA5A LINE L1 5173 5292 -1005 221 0 0 33 chr17 32216967 32216997 -57287556 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6105 121 39 6 chr17 32216997 32217933 -57286620 + L1MA5A LINE L1 5292 6265 -32 24 0 0 0 chr17 32217942 32217966 -57286587 + AT_rich Low_complexity Low_complexity 1 24 0 2706 136 55 103 chr17 32218674 32219306 -57285247 - L1MB3 LINE L1 -10 6173 5572 8487 216 59 35 chr17 32219680 32220335 -57284218 - L1MB3 LINE L1 -847 5299 4661 2394 73 0 7 chr17 32220335 32220636 -57283917 - AluY SINE Alu -12 299 1 8487 216 59 35 chr17 32220636 32221922 -57282631 - L1MB3 LINE L1 -1485 4661 3278 1882 150 0 14 chr17 32221922 32222208 -57282345 - AluSx SINE Alu -30 282 1 8487 216 59 35 chr17 32222208 32222845 -57281708 - L1MB3 LINE L1 -2868 3278 2658 2052 149 0 0 chr17 32223143 32223445 -57281108 + AluSx SINE Alu 1 302 -10 445 187 37 90 chr17 32225822 32225956 -57278597 - MER20B DNA MER1_type -598 185 59 21 0 0 0 chr17 32230099 32230120 -57274433 + AT_rich Low_complexity Low_complexity 1 21 0 276 273 23 11 chr17 32231741 32231829 -57272724 - L2 LINE L2 -22 3250 3162 2163 122 0 0 chr17 32231886 32232190 -57272363 + AluSq SINE Alu 3 306 -7 1226 155 9 40 chr17 32232266 32232492 -57272061 - MER20 DNA MER1_type 0 219 1 460 271 48 32 chr17 32232680 32232868 -57271685 - L3 LINE CR1 -171 1406 1216 1466 160 26 59 chr17 32232916 32233223 -57271330 - AluSx SINE Alu -15 297 1 515 305 7 13 chr17 32233382 32233533 -57271020 + L2 LINE L2 3163 3312 -1 2105 131 0 10 chr17 32233576 32233888 -57270665 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr17 32233934 32233955 -57270598 + AT_rich Low_complexity Low_complexity 1 21 0 235 277 226 6 chr17 32234018 32234177 -57270376 - L3 LINE CR1 -545 1032 839 4938 124 94 85 chr17 32234743 32235702 -57268851 - Tigger3b DNA MER2_type -1798 1230 256 2131 101 3 7 chr17 32235702 32235989 -57268564 + AluSx SINE Alu 1 286 -26 4938 124 94 85 chr17 32235989 32236247 -57268306 - Tigger3b DNA MER2_type -2772 256 2 530 223 66 6 chr17 32237150 32237316 -57267237 + MER104 DNA MER2_type 2 177 -3 758 180 20 7 chr17 32238407 32238557 -57265996 - FRAM SINE Alu -26 150 1 806 234 32 5 chr17 32238704 32238892 -57265661 + MIR SINE MIR 70 262 0 408 340 105 15 chr17 32239827 32240228 -57264325 + L2 LINE L2 2622 3053 -219 1974 136 24 0 chr17 32240585 32240879 -57263674 - AluSx SINE Alu -11 301 1 2007 91 91 0 chr17 32240957 32241231 -57263322 + AluSx SINE Alu 1 299 -13 647 168 0 181 chr17 32241692 32241833 -57262720 - L1MB8 LINE L1 -12 6166 6080 2213 128 0 0 chr17 32241833 32242145 -57262408 - AluSx SINE Alu 0 312 1 647 168 0 181 chr17 32242145 32242229 -57262324 - L1MB8 LINE L1 -98 6080 5982 21 0 0 0 chr17 32242234 32242255 -57262298 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr17 32242648 32242683 -57261870 + AT_rich Low_complexity Low_complexity 1 35 0 2961 173 93 24 chr17 32242683 32242759 -57261794 - L1MB7 LINE L1 -5 6179 6110 1200 51 0 6 chr17 32242759 32242915 -57261638 - L1PA4 LINE L1 -3 6152 5998 2961 173 93 24 chr17 32242915 32243514 -57261039 - L1MB7 LINE L1 -74 6110 5457 305 322 110 67 chr17 32243596 32243941 -57260612 + L1ME4a LINE L1 5520 5879 -242 30 69 0 0 chr17 32244472 32244530 -57260023 + AT_rich Low_complexity Low_complexity 1 58 0 23 68 0 0 chr17 32245214 32245258 -57259295 + AT_rich Low_complexity Low_complexity 1 44 0 1481 140 54 29 chr17 32245830 32246145 -57258408 - MER33 DNA MER1_type -1 323 1 1026 233 18 9 chr17 32246154 32246373 -57258180 - MER58A DNA MER1_type -1 223 3 560 235 80 19 chr17 32248627 32248789 -57255764 + MIR SINE MIR 41 212 -50 369 0 0 0 chr17 32249593 32249634 -57254919 + (CA)n Simple_repeat Simple_repeat 2 42 0 715 224 63 44 chr17 32251022 32251227 -57253326 - MER3 DNA MER1_type 0 209 1 937 198 24 51 chr17 32251724 32252066 -57252487 - L1MB8 LINE L1 -22 6161 5845 1764 178 7 3 chr17 32254779 32255083 -57249470 + MER2 DNA MER2_type 41 345 0 234 0 0 0 chr17 32255318 32255344 -57249209 + (T)n Simple_repeat Simple_repeat 1 26 0 247 204 0 19 chr17 32256512 32256566 -57247987 + L2 LINE L2 3217 3269 -3 543 266 90 17 chr17 32257160 32257337 -57247216 + L2 LINE L2 2762 2951 -363 991 128 36 8 chr17 32257338 32257528 -57247025 - L1MB1 LINE L1 -1 6167 6003 2321 75 16 10 chr17 32257666 32257974 -57246579 + AluY SINE Alu 1 310 -1 2002 118 0 37 chr17 32259729 32260025 -57244528 - AluSx SINE Alu -27 285 1 251 281 0 0 chr17 32260221 32260278 -57244275 + L2 LINE L2 3257 3313 0 1691 179 10 16 chr17 32260544 32260851 -57243702 - AluSx SINE Alu -7 305 1 3413 187 101 103 chr17 32261176 32261727 -57242826 + L1MCa LINE L1 32 582 -5844 2209 107 3 3 chr17 32261727 32262027 -57242526 + AluY SINE Alu 1 300 -11 3413 187 101 103 chr17 32262027 32262878 -57241675 + L1MCa LINE L1 582 3463 -2963 5857 94 29 25 chr17 32262906 32263037 -57241516 - L1MA3 LINE L1 0 6305 6176 2248 103 0 3 chr17 32263037 32263338 -57241215 - AluSq SINE Alu -13 300 1 5857 94 29 25 chr17 32263338 32264146 -57240407 - L1MA3 LINE L1 -129 6176 5362 2120 133 0 0 chr17 32264158 32264452 -57240101 - AluSx SINE Alu -18 294 1 21463 120 46 44 chr17 32264452 32265580 -57238973 - L1 LINE L1 -3845 3720 2596 649 109 0 0 chr17 32265580 32265681 -57238872 - AluSp/q SINE Alu -3 310 210 21463 120 46 44 chr17 32265681 32266455 -57238098 - L1 LINE L1 -4969 2596 1825 264 30 0 0 chr17 32266455 32266488 -57238065 + (TG)n Simple_repeat Simple_repeat 2 34 0 21463 120 46 44 chr17 32266488 32268176 -57236377 - L1 LINE L1 -5740 1825 16 3876 181 54 14 chr17 32268635 32269357 -57235196 - MER21B LTR ERV1 -109 754 4 256 294 15 0 chr17 32269436 32269504 -57235049 + L2 LINE L2 3237 3305 -8 392 301 138 8 chr17 32269768 32269891 -57234662 - L2 LINE L2 -12 3260 3122 419 342 25 13 chr17 32269986 32270144 -57234409 - MIR SINE MIR -89 173 14 2270 94 3 3 chr17 32270189 32270486 -57234067 + AluSc SINE Alu 1 297 -12 661 279 172 0 chr17 32270880 32271142 -57233411 + L1ME3A LINE L1 5577 5883 -287 2175 106 3 0 chr17 32271195 32271477 -57233076 + AluSp SINE Alu 1 283 -30 1980 129 42 0 chr17 32271806 32272093 -57232460 - AluSx SINE Alu -9 303 5 276 292 56 11 chr17 32275021 32275110 -57229443 + L2 LINE L2 3200 3292 -21 222 118 0 0 chr17 32275115 32275149 -57229404 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr17 32275250 32275278 -57229275 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 32275395 32275424 -57229129 + AT_rich Low_complexity Low_complexity 1 29 0 1899 131 25 45 chr17 32277258 32277572 -57226981 + AluJo SINE Alu 1 308 -4 24 67 0 0 chr17 32277624 32277669 -57226884 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr17 32278021 32278049 -57226504 + AT_rich Low_complexity Low_complexity 1 28 0 417 104 15 0 chr17 32279077 32279144 -57225409 + HY3 scRNA scRNA 30 97 -4 26 30 0 0 chr17 32279299 32279332 -57225221 + AT_rich Low_complexity Low_complexity 1 33 0 2038 101 25 4 chr17 32279409 32279713 -57224840 - AluSx SINE Alu 0 310 1 28 86 0 0 chr17 32282064 32282134 -57222419 + AT_rich Low_complexity Low_complexity 1 70 0 26 0 0 0 chr17 32282574 32282600 -57221953 + AT_rich Low_complexity Low_complexity 1 26 0 232 248 114 38 chr17 32282929 32283034 -57221519 + MIR SINE MIR 100 212 -50 337 308 131 8 chr17 32283273 32283403 -57221150 + MIR3 SINE MIR 38 183 -25 2209 111 0 7 chr17 32284235 32284541 -57220012 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 32285275 32285296 -57219257 + AT_rich Low_complexity Low_complexity 1 21 0 203 350 0 0 chr17 32285408 32285489 -57219064 - MIR SINE MIR -69 139 71 717 203 0 0 chr17 32286175 32286293 -57218260 + FLAM_C SINE Alu 1 118 -25 743 102 0 29 chr17 32286294 32286431 -57218122 + (TAGA)n Simple_repeat Simple_repeat 1 133 0 1663 168 52 3 chr17 32286432 32286718 -57217835 + AluJo SINE Alu 5 304 -8 200 140 0 35 chr17 32286725 32286782 -57217771 + (TAAAAA)n Simple_repeat Simple_repeat 4 58 0 274 318 0 0 chr17 32286905 32286993 -57217560 + MIR SINE MIR 175 262 0 23 0 0 0 chr17 32287077 32287100 -57217453 + AT_rich Low_complexity Low_complexity 1 23 0 226 233 41 14 chr17 32287146 32287219 -57217334 - HAL1b LINE L1 -83 1265 1191 2226 93 0 39 chr17 32287386 32287696 -57216857 + AluSq SINE Alu 1 298 -15 646 263 16 43 chr17 32287710 32287965 -57216588 + L1MEd LINE L1 1010 1257 -4862 284 256 78 0 chr17 32288286 32288376 -57216177 - L1ME LINE L1 -462 5659 5563 195 329 27 14 chr17 32289353 32289426 -57215127 + MIR SINE MIR 19 92 -116 2120 122 3 3 chr17 32290205 32290501 -57214052 - AluSq SINE Alu -17 296 1 250 333 80 28 chr17 32290970 32291183 -57213370 + L2 LINE L2 2304 2527 -787 2274 91 3 3 chr17 32291616 32291912 -57212641 + AluSc SINE Alu 1 296 -13 1932 153 0 23 chr17 32291967 32292275 -57212278 - AluJo SINE Alu -11 301 1 235 287 9 26 chr17 32292631 32292746 -57211807 + L1MC/D LINE L1 5687 5799 -2009 1810 259 61 46 chr17 32292760 32293320 -57211233 - MLT1K LTR MaLR -17 571 4 1875 165 0 9 chr17 32293596 32293911 -57210642 + AluJb SINE Alu 1 312 0 312 250 73 10 chr17 32293994 32294090 -57210463 - MIR SINE MIR -1 261 160 242 327 94 38 chr17 32294120 32294279 -57210274 - MER5A DNA MER1_type -8 181 14 * 304 255 128 43 chr17 32294139 32294280 -57210273 + MER5A DNA MER1_type 37 189 0 21 0 0 0 chr17 32294718 32294739 -57209814 + AT_rich Low_complexity Low_complexity 1 21 0 2205 115 10 3 chr17 32294741 32295046 -57209507 + AluSq SINE Alu 3 309 -4 21 0 0 0 chr17 32296044 32296065 -57208488 + AT_rich Low_complexity Low_complexity 1 21 0 213 39 0 0 chr17 32296584 32296610 -57207943 + (CAA)n Simple_repeat Simple_repeat 2 27 0 274 347 139 0 chr17 32296615 32296759 -57207794 - MIR3 SINE MIR -15 193 30 621 170 47 0 chr17 32298450 32298556 -57205997 + Tigger7 DNA MER2_type 2 112 -621 1981 142 52 16 chr17 32298557 32298924 -57205629 + Tigger7 DNA MER2_type 2108 2487 0 2310 83 0 0 chr17 32299204 32299493 -57205060 + AluY SINE Alu 14 302 -9 719 237 36 48 chr17 32299718 32299967 -57204586 + MER46C DNA MER2_type 1 246 -92 517 310 43 27 chr17 32299993 32300101 -57204452 + MLT1J2 LTR MaLR 37 142 -308 2389 163 21 9 chr17 32300101 32300530 -57204023 - Tigger2a DNA MER2_type 0 434 1 517 310 43 27 chr17 32300530 32300757 -57203796 + MLT1J2 LTR MaLR 142 450 0 847 316 76 6 chr17 32300763 32301092 -57203461 + LTR33 LTR ERVL 3 354 -167 246 245 0 0 chr17 32301157 32301206 -57203347 + LTR33 LTR ERVL 473 521 0 790 192 70 6 chr17 32301234 32301390 -57203163 + FRAM SINE Alu 1 159 -17 204 226 0 0 chr17 32301635 32301688 -57202865 + T-rich Low_complexity Low_complexity 1 53 0 252 0 0 0 chr17 32301752 32301780 -57202773 + (T)n Simple_repeat Simple_repeat 1 28 0 2450 90 0 0 chr17 32301853 32302163 -57202390 - AluSq SINE Alu -3 310 1 1684 158 0 41 chr17 32302214 32302506 -57202047 + AluJo SINE Alu 10 289 -23 276 167 0 0 chr17 32302559 32302601 -57201952 + 5S rRNA rRNA 1 42 -79 551 140 70 35 chr17 32302748 32302862 -57201691 + FLAM_A SINE Alu 23 140 -2 572 217 94 90 chr17 32303380 32303495 -57201058 - MER58C DNA MER1_type -2207 213 95 2181 75 14 31 chr17 32303495 32303789 -57200764 + AluSg SINE Alu 16 304 -6 572 217 94 90 chr17 32303789 32303885 -57200668 - MER58C DNA MER1_type -2325 95 1 249 194 97 48 chr17 32304092 32304216 -57200337 + MER113 DNA MER1_type? 44 173 -348 1920 153 0 13 chr17 32305024 32305324 -57199229 + AluJb SINE Alu 3 298 -14 1876 125 29 35 chr17 32305329 32305349 -57199204 - L1MB7 LINE L1 -54 6130 6111 2410 77 0 0 chr17 32305349 32305648 -57198905 + AluY SINE Alu 1 299 -12 1876 125 29 35 chr17 32305648 32305971 -57198582 - L1MB7 LINE L1 -73 6111 5789 1126 180 19 5 chr17 32305979 32306190 -57198363 - L1MB7 LINE L1 -493 5691 5478 2566 50 0 0 chr17 32306386 32306686 -57197867 + AluY SINE Alu 3 302 -9 1635 128 15 119 chr17 32306699 32307026 -57197527 - AluJo SINE Alu -9 303 11 2011 136 0 29 chr17 32307343 32307519 -57197034 - AluSq SINE Alu -6 307 142 2153 131 0 6 chr17 32307519 32307833 -57196720 - AluSx SINE Alu 0 312 1 2011 136 0 29 chr17 32307833 32307972 -57196581 - AluSq SINE Alu -171 142 1 2100 110 7 0 chr17 32308088 32308378 -57196175 + AluSx SINE Alu 1 292 -20 1113 154 0 11 chr17 32308378 32308553 -57196000 + AluSg/x SINE Alu 135 307 -5 548 259 60 22 chr17 32308559 32308744 -57195809 - MARNA DNA Mariner -48 538 347 446 320 93 0 chr17 32308772 32308816 -57195737 - MARNA DNA Mariner -311 275 236 1311 179 132 12 chr17 32308816 32309073 -57195480 + AluJb SINE Alu 2 289 -23 446 320 93 0 chr17 32309073 32309200 -57195353 - MARNA DNA Mariner -350 236 88 2065 118 20 0 chr17 32309341 32309638 -57194915 - AluSx SINE Alu -9 303 1 210 218 181 75 chr17 32310525 32310658 -57193895 - MIR SINE MIR -50 212 66 342 0 0 0 chr17 32310792 32310830 -57193723 + (TG)n Simple_repeat Simple_repeat 1 38 0 1458 160 86 4 chr17 32310832 32311088 -57193465 - AluJb SINE Alu -33 279 3 2161 8 0 8 chr17 32311100 32311403 -57193150 + L1PA3 LINE L1 5910 6210 0 2055 123 26 23 chr17 32311770 32312080 -57192473 - AluSq SINE Alu -2 311 1 190 344 94 47 chr17 32312408 32312620 -57191933 - L2 LINE L2 -353 2961 2740 319 286 171 24 chr17 32313085 32313337 -57191216 - L1ME LINE L1 -537 5584 5296 522 222 243 0 chr17 32313678 32313872 -57190681 - MIR SINE MIR -4 258 18 2162 115 0 0 chr17 32313975 32314254 -57190299 + AluSx SINE Alu 1 279 -33 342 0 0 0 chr17 32314257 32314295 -57190258 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 180 77 0 0 chr17 32314503 32314529 -57190024 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 338 301 119 28 chr17 32314682 32314858 -57189695 - L1ME LINE L1 -1974 4172 3981 544 258 55 6 chr17 32315253 32315416 -57189137 - MIR SINE MIR -32 230 60 226 203 25 76 chr17 32315441 32315520 -57189033 + L1MC4 LINE L1 6627 6701 -1341 893 223 123 24 chr17 32315675 32315886 -57188667 + MER8 DNA MER2_type 7 238 -1 2419 100 0 0 chr17 32316149 32316459 -57188094 + AluSq SINE Alu 4 313 0 21 0 0 0 chr17 32320954 32320975 -57183578 + AT_rich Low_complexity Low_complexity 1 21 0 807 40 0 0 chr17 32322445 32322545 -57182008 + L1PA3 LINE L1 6056 6155 0 2220 260 95 41 chr17 32323452 32324744 -57179809 - L1MC4a LINE L1 -755 5391 4757 255 333 21 42 chr17 32324973 32325069 -57179484 + MIR3 SINE MIR 93 186 -22 2136 99 0 17 chr17 32325812 32326105 -57178448 + AluSg SINE Alu 1 288 -22 203 171 0 0 chr17 32329644 32329685 -57174868 + (TA)n Simple_repeat Simple_repeat 1 41 0 216 301 52 46 chr17 32329990 32330121 -57174432 - L2 LINE L2 -5 3308 3174 829 173 0 0 chr17 32330121 32330254 -57174299 + FLAM_C SINE Alu 1 133 0 216 301 52 46 chr17 32330254 32330275 -57174278 - L2 LINE L2 -139 3174 3155 1939 132 21 0 chr17 32330283 32330572 -57173981 - AluSx SINE Alu -17 295 1 330 318 8 32 chr17 32330806 32330932 -57173621 + MIR3 SINE MIR 43 165 -43 2122 123 7 10 chr17 32331393 32331694 -57172859 - AluSx SINE Alu -12 300 1 480 356 54 4 chr17 32332215 32332454 -57172099 - MIR SINE MIR -10 252 2 21 82 0 0 chr17 32334099 32334148 -57170405 + AT_rich Low_complexity Low_complexity 1 49 0 1900 152 0 19 chr17 32334189 32334504 -57170049 - AluJb SINE Alu -3 309 1 191 246 72 43 chr17 32334772 32334841 -57169712 + L3b LINE CR1 1288 1358 -225 301 347 50 0 chr17 32334931 32335052 -57169501 - MIR SINE MIR -116 146 20 2134 98 3 30 chr17 32335481 32335786 -57168767 + AluSx SINE Alu 3 299 -13 23 0 0 0 chr17 32335860 32335883 -57168670 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr17 32336339 32336374 -57168179 + AT_rich Low_complexity Low_complexity 1 35 0 2204 104 0 7 chr17 32336673 32336972 -57167581 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr17 32336974 32337002 -57167551 + (TG)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr17 32337162 32337186 -57167367 + AT_rich Low_complexity Low_complexity 1 24 0 363 280 179 12 chr17 32337648 32337816 -57166737 + MIR SINE MIR 64 259 -3 3399 90 17 0 chr17 32337862 32338339 -57166214 - L1MA2 LINE L1 -462 5842 5358 1820 108 34 3 chr17 32338501 32338797 -57165756 + L1MA1 LINE L1 5998 6302 0 283 272 136 0 chr17 32338882 32338985 -57165568 + MIR SINE MIR 124 240 -22 888 190 155 20 chr17 32339189 32339389 -57165164 - AluJo SINE Alu -32 280 54 549 247 41 41 chr17 32340159 32340305 -57164248 + MER5B DNA MER1_type 32 177 -1 22 0 0 0 chr17 32340350 32340372 -57164181 + AT_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 32340611 32340649 -57163904 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr17 32342615 32342637 -57161916 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr17 32343578 32343602 -57160951 + AT_rich Low_complexity Low_complexity 1 24 0 192 313 0 60 chr17 32343627 32343694 -57160859 - MER5A DNA MER1_type -103 86 24 333 0 0 0 chr17 32345337 32345374 -57159179 + (CA)n Simple_repeat Simple_repeat 2 38 0 1892 137 0 69 chr17 32345441 32345776 -57158777 + AluSx SINE Alu 1 312 0 641 226 0 24 chr17 32345776 32345900 -57158653 + FLAM_A SINE Alu 2 122 -11 1721 123 0 61 chr17 32346351 32346628 -57157925 + AluJb SINE Alu 1 260 -52 414 303 15 8 chr17 32346645 32346777 -57157776 - MER5A DNA MER1_type -50 139 7 969 104 129 136 chr17 32347246 32347295 -57157258 - L1MA4 LINE L1 -5 6295 6247 2228 104 10 0 chr17 32347295 32347603 -57156950 - AluSx SINE Alu -1 311 1 969 104 129 136 chr17 32347603 32347798 -57156755 - L1MA4 LINE L1 -53 6247 6051 1964 150 13 0 chr17 32347798 32348098 -57156455 - AluSx SINE Alu -8 304 1 969 104 129 136 chr17 32348098 32348132 -57156421 - L1MA4 LINE L1 -249 6051 6018 685 294 105 47 chr17 32348290 32348739 -57155814 - MLT1K LTR MaLR -2 586 112 2222 81 7 0 chr17 32349609 32349894 -57154659 + AluSq SINE Alu 8 294 -19 394 145 17 0 chr17 32350155 32350240 -57154313 - AluS SINE Alu -18 282 228 1760 107 29 0 chr17 32350252 32350496 -57154057 - AluSq SINE Alu -62 251 1 21 0 0 0 chr17 32350527 32350548 -57154005 + AT_rich Low_complexity Low_complexity 1 21 0 418 237 105 13 chr17 32351587 32351739 -57152814 + MIR SINE MIR 3 168 -94 1003 126 0 50 chr17 32352272 32352431 -57152122 + FAM SINE Alu 22 172 -13 307 267 97 68 chr17 32354832 32355038 -57149515 + L1MB3 LINE L1 4556 4767 -1379 821 126 6 120 chr17 32355227 32355410 -57149143 + AluJb SINE Alu 140 301 -11 2243 92 0 0 chr17 32355654 32355936 -57148617 + AluSg SINE Alu 1 282 -28 294 95 0 0 chr17 32355936 32355978 -57148575 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 523 173 127 9 chr17 32356081 32356191 -57148362 + FLAM_A SINE Alu 1 123 -10 373 324 7 8 chr17 32356282 32356425 -57148128 + L1MB3 LINE L1 5527 5663 -458 772 195 97 26 chr17 32356461 32356687 -57147866 - L1ME3 LINE L1 0 6162 5921 381 171 67 9 chr17 32356688 32356793 -57147760 + L1MB3 LINE L1 5709 5819 -302 752 121 7 93 chr17 32356803 32356993 -57147560 + L1MB3 LINE L1 6025 6171 0 2311 49 3 39 chr17 32357125 32357431 -57147122 + AluY SINE Alu 1 295 -16 277 330 77 0 chr17 32358195 32358286 -57146267 - L2 LINE L2 -14 3258 3161 353 205 8 0 chr17 32358396 32358523 -57146030 + (TA)n Simple_repeat Simple_repeat 1 128 0 21 0 0 0 chr17 32358557 32358578 -57145975 + AT_rich Low_complexity Low_complexity 1 21 0 1896 138 0 48 chr17 32358909 32359220 -57145333 - AluJb SINE Alu -16 296 1 26 0 0 0 chr17 32359493 32359519 -57145034 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr17 32359825 32359849 -57144704 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 32361186 32361214 -57143339 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 32361698 32361733 -57142820 + AT_rich Low_complexity Low_complexity 1 35 0 558 233 45 74 chr17 32362307 32362509 -57142044 - L2 LINE L2 -17 3296 3101 399 278 70 9 chr17 32362834 32362949 -57141604 - MIR SINE MIR -116 146 25 183 42 0 0 chr17 32364079 32364103 -57140450 + (A)n Simple_repeat Simple_repeat 1 24 0 263 246 123 44 chr17 32364196 32364310 -57140243 - MIR SINE MIR -16 246 124 1891 149 7 0 chr17 32364474 32364763 -57139790 + AluJb SINE Alu 1 291 -21 235 161 36 0 chr17 32364768 32364824 -57139729 + (TA)n Simple_repeat Simple_repeat 1 58 0 339 25 0 0 chr17 32364826 32364866 -57139687 + (TG)n Simple_repeat Simple_repeat 2 41 0 237 132 0 0 chr17 32364934 32364972 -57139581 + (TG)n Simple_repeat Simple_repeat 2 39 0 200 214 179 0 chr17 32364977 32365033 -57139520 + MIR SINE MIR 82 147 -115 374 265 148 19 chr17 32365324 32365486 -57139067 - MIR3 SINE MIR -5 203 21 1847 145 35 0 chr17 32365561 32365843 -57138710 + AluSx SINE Alu 1 292 -20 1958 170 0 0 chr17 32366508 32366808 -57137745 + AluJb SINE Alu 1 300 -12 1970 146 3 7 chr17 32366919 32367221 -57137332 + AluJb SINE Alu 1 301 -11 807 135 0 0 chr17 32368038 32368149 -57136404 + AluSq/x SINE Alu 1 111 -201 1542 162 0 0 chr17 32368151 32368392 -57136161 + AluSx SINE Alu 64 304 -8 198 0 0 0 chr17 32370065 32370087 -57134466 + (T)n Simple_repeat Simple_repeat 1 22 0 215 222 19 0 chr17 32371610 32371664 -57132889 + CT-rich Low_complexity Low_complexity 2 56 0 239 0 32 0 chr17 32372335 32372366 -57132187 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 206 256 190 50 chr17 32373137 32373258 -57131295 + MIR SINE MIR 79 216 -46 904 86 111 94 chr17 32374487 32374650 -57129903 + L1MA8 LINE L1 6050 6209 -82 2453 77 3 6 chr17 32374650 32374963 -57129590 - AluSx SINE Alu 0 312 1 904 86 111 94 chr17 32374963 32374998 -57129555 + L1MA8 LINE L1 6209 6242 -49 1531 127 9 0 chr17 32374998 32375226 -57129327 - MER30 DNA MER1_type 0 230 1 904 86 111 94 chr17 32375226 32375260 -57129293 + L1MA8 LINE L1 6242 6287 -4 225 292 31 0 chr17 32375310 32375375 -57129178 + LTR6A LTR ERV1 178 244 -320 28 29 0 0 chr17 32375685 32375720 -57128833 + AT_rich Low_complexity Low_complexity 1 35 0 2254 117 0 3 chr17 32376147 32376456 -57128097 - AluSx SINE Alu -4 308 1 1566 172 52 0 chr17 32376597 32376885 -57127668 + AluJb SINE Alu 1 302 0 444 348 103 46 chr17 32377665 32377967 -57126586 - L2 LINE L2 -455 2859 2576 490 244 122 0 chr17 32377968 32378083 -57126470 + FLAM_A SINE Alu 1 129 -4 444 348 103 46 chr17 32378047 32378458 -57126095 - L2 LINE L2 -738 2576 2142 270 299 49 83 chr17 32378514 32378658 -57125895 + MIR3 SINE MIR 22 160 -48 1847 140 7 3 chr17 32378814 32379107 -57125446 + AluJb SINE Alu 1 294 -18 269 156 109 0 chr17 32381550 32381614 -57122939 - L1ME4a LINE L1 -23 6098 6028 183 42 0 0 chr17 32382699 32382723 -57121830 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2257 75 0 0 chr17 32382725 32383005 -57121548 - AluSc SINE Alu -29 280 1 182 310 113 7 chr17 32383054 32383196 -57121357 + L2 LINE L2 3152 3308 -5 273 119 0 0 chr17 32384329 32384371 -57120182 + (A)n Simple_repeat Simple_repeat 1 42 0 654 247 60 22 chr17 32385266 32385448 -57119105 + MER5A DNA MER1_type 1 189 0 2329 77 3 0 chr17 32386683 32386981 -57117572 - AluY SINE Alu -12 299 1 2027 128 0 0 chr17 32386981 32387286 -57117267 - AluSx SINE Alu -7 305 1 1613 159 72 3 chr17 32388262 32388552 -57116001 + AluJb SINE Alu 1 310 -2 2140 107 0 3 chr17 32389176 32389476 -57115077 - AluSg SINE Alu -11 299 1 785 187 0 8 chr17 32389850 32389984 -57114569 + FLAM_A SINE Alu 1 133 0 23 92 0 0 chr17 32390186 32390251 -57114302 + AT_rich Low_complexity Low_complexity 1 65 0 591 147 0 11 chr17 32390962 32391213 -57113340 + AluJb SINE Alu 1 303 -9 2019 108 3 10 chr17 32391381 32391669 -57112884 - AluSx SINE Alu -15 297 12 220 283 9 94 chr17 32392421 32392527 -57112026 - L2 LINE L2 -60 3212 3116 528 110 81 88 chr17 32393543 32393679 -57110874 - L1ME4a LINE L1 -28 6093 5959 198 0 0 0 chr17 32394874 32394896 -57109657 + (ATTAG)n Simple_repeat Simple_repeat 5 26 0 721 198 77 16 chr17 32395683 32395865 -57108688 - L1ME3A LINE L1 -9 6161 5969 1698 182 0 0 chr17 32395979 32396265 -57108288 + AluJo SINE Alu 5 290 -22 1944 166 45 0 chr17 32396862 32397194 -57107359 + MER7A DNA MER2_type 2 346 0 26 0 0 0 chr17 32398250 32398276 -57106277 + AT_rich Low_complexity Low_complexity 1 26 0 181 313 61 68 chr17 32401522 32401669 -57102884 + MER5B DNA MER1_type 33 178 0 1816 133 48 0 chr17 32402339 32402633 -57101920 + AluSx SINE Alu 1 308 -4 1976 57 4 0 chr17 32403489 32403736 -57100817 + AluY SINE Alu 55 302 -9 2285 82 7 0 chr17 32403891 32404194 -57100359 + AluSp SINE Alu 1 305 -8 191 250 71 0 chr17 32404668 32404724 -57099829 + L2 LINE L2 3248 3307 -6 402 304 8 0 chr17 32405139 32405264 -57099289 + L1ME4a LINE L1 4484 4609 -1537 382 233 37 132 chr17 32405494 32405683 -57098870 - MLT1I LTR MaLR -42 367 197 855 168 103 0 chr17 32405861 32406016 -57098537 + MER3 DNA MER1_type 39 209 0 390 210 156 72 chr17 32405870 32406037 -57098516 - MER3 DNA MER1_type 0 209 29 * 321 291 71 7 chr17 32406058 32406199 -57098354 - MLT1I LTR MaLR -259 150 1 1819 133 28 0 chr17 32406235 32406521 -57098032 + AluSx SINE Alu 7 300 -12 311 249 34 67 chr17 32406637 32406846 -57097707 + L1ME4a LINE L1 5269 5470 -2338 301 236 191 80 chr17 32406918 32406948 -57097605 + L1ME4a LINE L1 5586 5611 -510 2291 81 3 7 chr17 32406948 32407255 -57097298 + AluSp SINE Alu 1 306 -7 301 236 191 80 chr17 32407255 32407601 -57096952 + L1ME4a LINE L1 5611 6004 -117 1966 111 13 17 chr17 32408034 32408173 -57096380 + AluSq SINE Alu 1 139 -174 2264 93 3 3 chr17 32408173 32408484 -57096069 + AluSp SINE Alu 1 311 -2 1966 111 13 17 chr17 32408484 32408642 -57095911 + AluSq SINE Alu 139 297 -16 301 146 250 0 chr17 32408948 32409044 -57095509 - L2 LINE L2 -219 3053 2934 260 111 0 0 chr17 32409104 32409140 -57095413 + MIR SINE MIR 216 251 -11 181 111 0 0 chr17 32409921 32409948 -57094605 - L2 LINE L2 -39 3233 3207 217 348 51 34 chr17 32409992 32410110 -57094443 - MIR SINE MIR -123 139 20 1283 220 130 75 chr17 32410149 32410512 -57094041 - MLT1D LTR MaLR 0 505 163 1882 155 0 7 chr17 32410512 32410822 -57093731 - AluJb SINE Alu -4 308 1 1283 220 130 75 chr17 32410822 32410879 -57093674 - MLT1D LTR MaLR -342 163 111 1885 120 97 3 chr17 32410879 32411187 -57093366 + MER1B DNA MER1_type 1 337 0 1283 220 130 75 chr17 32411187 32411242 -57093311 - MLT1D LTR MaLR -394 111 3 258 268 61 24 chr17 32411287 32411369 -57093184 - L2 LINE L2 -35 3237 3153 217 208 65 78 chr17 32411454 32411531 -57093022 - MIR SINE MIR -21 241 166 191 234 64 0 chr17 32411826 32411873 -57092680 - L2 LINE L2 -563 2751 2702 246 286 66 0 chr17 32413071 32413162 -57091391 - MIR SINE MIR -91 171 75 213 316 52 74 chr17 32413588 32413898 -57090655 - L2 LINE L2 -61 3211 2909 359 189 81 45 chr17 32414330 32414441 -57090112 + MIR SINE MIR 16 130 -132 337 293 119 81 chr17 32416235 32416754 -57087799 - L3 LINE CR1 -175 1402 864 275 185 0 15 chr17 32416936 32417001 -57087552 - L1ME4a LINE L1 -179 5942 5879 265 291 54 14 chr17 32417052 32417200 -57087353 - L1MC4a LINE L1 -158 7650 7497 468 295 108 21 chr17 32417242 32417483 -57087070 - L3 LINE CR1 -711 866 605 21 0 0 0 chr17 32417613 32417634 -57086919 + GC_rich Low_complexity Low_complexity 1 21 0 3184 189 20 20 chr17 32417862 32418502 -57086051 + L1MC3 LINE L1 6980 7619 -166 1995 141 0 6 chr17 32418582 32418894 -57085659 + AluJb SINE Alu 1 310 -2 630 252 7 0 chr17 32419045 32419180 -57085373 + MIR SINE MIR 103 238 -24 986 169 6 0 chr17 32420552 32420724 -57083829 - FRAM SINE Alu -11 165 1 1853 106 42 7 chr17 32420734 32421017 -57083536 - AluSx SINE Alu -19 293 1 2187 100 0 7 chr17 32422108 32422408 -57082145 + AluSx SINE Alu 1 298 -14 2226 92 3 0 chr17 32422441 32422736 -57081817 + AluSx SINE Alu 1 296 -16 607 297 158 12 chr17 32422741 32423346 -57081207 - L2 LINE L2 -5 3308 2535 2190 83 0 13 chr17 32423665 32423967 -57080586 + AluY SINE Alu 1 298 -13 347 239 80 26 chr17 32424501 32424614 -57079939 - L3 LINE CR1 -130 1447 1329 207 216 0 48 chr17 32424665 32424790 -57079763 + (TCCA)n Simple_repeat Simple_repeat 4 122 0 368 71 18 0 chr17 32424854 32424910 -57079643 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 2245 63 0 14 chr17 32425258 32425602 -57078951 - AluY SINE Alu 0 340 1 266 281 73 0 chr17 32425634 32425716 -57078837 + MIR SINE MIR 114 201 -61 2259 94 0 7 chr17 32425989 32426298 -57078255 - AluSc SINE Alu -2 307 1 347 219 68 3 chr17 32426342 32426442 -57078111 - MIR SINE MIR -86 122 17 706 210 21 7 chr17 32427063 32427206 -57077347 + MIR SINE MIR 13 157 -105 2080 75 0 11 chr17 32428050 32428316 -57076237 - AluSx SINE Alu -17 295 33 294 279 48 36 chr17 32429186 32429437 -57075116 - L1MC/D LINE L1 -2474 5915 5662 312 242 115 76 chr17 32429446 32429603 -57074950 - L1MC/D LINE L1 -4028 2512 2350 2055 129 23 13 chr17 32429716 32430025 -57074528 - AluJo SINE Alu 0 312 1 1578 254 98 12 chr17 32430238 32430797 -57073756 - L1MC4 LINE L1 -446 7596 6990 523 315 24 40 chr17 32431085 32431336 -57073217 - L1M4 LINE L1 -1718 4428 4182 388 321 32 83 chr17 32431811 32432088 -57072465 - L1M4 LINE L1 -2030 4116 3854 366 242 139 30 chr17 32432093 32432258 -57072295 - MLT1K LTR MaLR -399 189 7 319 378 79 4 chr17 32432607 32432848 -57071705 + MIR SINE MIR 2 260 -2 201 39 0 0 chr17 32432997 32433023 -57071530 + (ATG)n Simple_repeat Simple_repeat 3 28 0 1322 110 5 26 chr17 32433108 32433299 -57071254 + AluSx SINE Alu 1 187 -125 2320 78 0 3 chr17 32433758 32434069 -57070484 + AluY SINE Alu 1 310 0 256 304 0 0 chr17 32435185 32435254 -57069299 + MIR SINE MIR 85 153 -109 234 283 0 0 chr17 32435524 32435584 -57068969 - MIR SINE MIR -96 166 107 322 261 8 41 chr17 32436747 32436877 -57067676 - MIR SINE MIR -59 149 27 397 338 20 0 chr17 32437503 32437651 -57066902 - MLT1L LTR MaLR -22 593 443 549 270 26 0 chr17 32437744 32437896 -57066657 - MLT1L LTR MaLR -340 275 120 213 187 27 80 chr17 32438018 32438093 -57066460 - MIR SINE MIR -109 153 83 459 255 7 40 chr17 32438258 32438407 -57066146 - MIR3 SINE MIR -10 198 55 302 231 56 13 chr17 32438637 32438745 -57065808 - MIR SINE MIR -69 139 75 241 220 305 1 chr17 32438762 32438857 -57065696 + MER45 DNA AcHobo 1 125 -62 469 227 36 0 chr17 32440383 32440493 -57064060 - Charlie8 DNA MER1_type -2174 243 130 1806 157 38 3 chr17 32440494 32440781 -57063772 + AluJb SINE Alu 1 297 -15 2410 80 0 0 chr17 32440783 32441098 -57063455 + AluSq SINE Alu 1 315 0 2177 128 0 13 chr17 32441141 32441447 -57063106 - AluJb SINE Alu -10 302 1 705 238 210 25 chr17 32441489 32441916 -57062637 - L1ME1 LINE L1 -17 6543 6040 2346 221 37 83 chr17 32441923 32442221 -57062332 - L1ME1 LINE L1 -2155 4385 4075 2680 59 0 0 chr17 32442221 32442528 -57062025 - AluY SINE Alu -3 308 2 2346 221 37 83 chr17 32442528 32442914 -57061639 - L1ME1 LINE L1 -2465 4075 3673 1915 154 3 10 chr17 32442914 32443212 -57061341 - AluJo SINE Alu -16 296 1 2346 221 37 83 chr17 32443212 32443481 -57061072 - L1ME1 LINE L1 -2867 3673 3393 2248 96 3 3 chr17 32443481 32443783 -57060770 + AluSp SINE Alu 1 302 0 2346 221 37 83 chr17 32443783 32443863 -57060690 - L1ME1 LINE L1 -3147 3393 3311 1967 149 10 16 chr17 32443863 32443896 -57060657 - AluSx SINE Alu -1 311 279 186 43 0 0 chr17 32443896 32443919 -57060634 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1967 149 10 16 chr17 32443919 32444194 -57060359 - AluSx SINE Alu -33 279 5 2346 221 37 83 chr17 32444194 32444235 -57060318 - L1ME1 LINE L1 -3229 3311 3270 2346 95 0 13 chr17 32444235 32444539 -57060014 - AluSq SINE Alu -12 301 2 2346 221 37 83 chr17 32444539 32444578 -57059975 - L1ME1 LINE L1 -3270 3270 3231 1842 141 25 7 chr17 32444578 32444854 -57059699 + AluJo SINE Alu 2 282 -30 2346 221 37 83 chr17 32444854 32445303 -57059250 - L1ME1 LINE L1 -3309 3231 2757 920 243 54 59 chr17 32445297 32445597 -57058956 - L1ME1 LINE L1 -5096 1447 1148 * 2562 63 0 0 chr17 32445597 32445898 -57058655 - AluY SINE Alu -10 301 1 920 243 54 59 chr17 32445898 32446021 -57058532 - L1ME1 LINE L1 -5395 1148 1026 866 209 11 23 chr17 32446033 32446210 -57058343 - FRAM SINE Alu 0 40 1 347 258 11 21 chr17 32446235 32446328 -57058225 - L1ME1 LINE L1 -5541 1002 911 311 289 64 39 chr17 32446377 32446533 -57058020 - L1ME1 LINE L1 -5595 935 776 385 341 91 19 chr17 32446717 32447025 -57057528 - L1ME1 LINE L1 -6210 330 1 827 95 24 40 chr17 32447148 32447256 -57057297 - AluSc SINE Alu -71 238 131 2395 97 0 3 chr17 32447256 32447555 -57056998 - AluSx SINE Alu -14 298 1 827 95 24 40 chr17 32447555 32447572 -57056981 - AluSc SINE Alu -178 131 115 937 252 45 8 chr17 32447727 32447969 -57056584 + MIR SINE MIR 12 262 0 212 229 29 14 chr17 32448603 32448673 -57055880 + MIR SINE MIR 78 148 -60 22 0 0 0 chr17 32448943 32448965 -57055588 + AT_rich Low_complexity Low_complexity 1 22 0 467 215 39 15 chr17 32448984 32449114 -57055439 + MIR SINE MIR 74 206 -56 2321 99 0 16 chr17 32449266 32449579 -57054974 - AluSc SINE Alu -1 308 1 2299 112 0 6 chr17 32449628 32449940 -57054613 - AluSx SINE Alu -2 310 1 199 314 0 0 chr17 32451324 32451375 -57053178 + L2 LINE L2 3250 3300 -13 207 100 0 0 chr17 32451375 32451405 -57053148 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 990 148 13 13 chr17 32451476 32451631 -57052922 + FRAM SINE Alu 1 154 -22 180 0 0 0 chr17 32451643 32451663 -57052890 + (ATG)n Simple_repeat Simple_repeat 2 21 0 608 146 19 0 chr17 32451665 32451768 -57052785 - AluSp/q SINE Alu -21 292 188 501 226 30 15 chr17 32451798 32451931 -57052622 - L2 LINE L2 -12 3301 3167 2385 91 0 7 chr17 32452224 32452533 -57052020 + AluSx SINE Alu 1 307 -5 631 249 36 71 chr17 32452741 32453032 -57051521 - L2 LINE L2 -246 3067 2708 2583 59 0 7 chr17 32453032 32453338 -57051215 - AluY SINE Alu -7 304 1 631 249 36 71 chr17 32453338 32453464 -57051089 - L2 LINE L2 -605 2708 2579 327 267 19 9 chr17 32453763 32453868 -57050685 + L1ME LINE L1 5714 5819 -302 287 252 135 45 chr17 32453998 32454109 -57050444 - L1ME3A LINE L1 -6 6164 6044 254 241 0 76 chr17 32454898 32454977 -57049576 + MER81 DNA DNA 38 110 -4 1960 148 0 13 chr17 32455036 32455339 -57049214 - AluJb SINE Alu -13 299 1 1922 132 0 69 chr17 32455521 32455839 -57048714 + AluJb SINE Alu 1 296 -16 1032 265 168 34 chr17 32457162 32457584 -57046969 - MER21B LTR ERV1 -99 764 249 1712 171 3 17 chr17 32457584 32457876 -57046677 + AluJo SINE Alu 1 288 -24 1032 265 168 34 chr17 32457876 32458007 -57046546 - MER21B LTR ERV1 -614 249 137 251 246 55 57 chr17 32458763 32458943 -57045610 + MIR SINE MIR 12 192 -62 2231 65 0 14 chr17 32459446 32459723 -57044830 - AluY SINE Alu 0 311 39 284 342 61 56 chr17 32461317 32461503 -57043050 + L2 LINE L2 2826 3015 -257 889 118 0 0 chr17 32461503 32461630 -57042923 + FLAM_C SINE Alu 2 128 -5 284 342 61 56 chr17 32461630 32461674 -57042879 + L2 LINE L2 3015 3057 -215 636 297 73 49 chr17 32461881 32462277 -57042276 - L1ME3A LINE L1 -750 5396 5011 1807 157 20 0 chr17 32462277 32462452 -57042101 - AluSx SINE Alu -4 308 123 246 32 0 0 chr17 32462452 32462483 -57042070 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1807 157 20 0 chr17 32462483 32462601 -57041952 - AluSx SINE Alu -189 123 9 636 297 73 49 chr17 32462601 32463159 -57041394 - L1ME3A LINE L1 -1135 5011 4670 2320 125 0 0 chr17 32463159 32463471 -57041082 + AluSx SINE Alu 1 312 0 636 297 73 49 chr17 32463471 32463659 -57040894 - L1ME3A LINE L1 -1476 4670 4488 2258 111 0 13 chr17 32463682 32463998 -57040555 - AluSq SINE Alu -1 312 1 2221 117 0 0 chr17 32464191 32464500 -57040053 - AluSq SINE Alu 0 309 1 2567 54 0 3 chr17 32464676 32464971 -57039582 - AluY SINE Alu -17 294 1 1167 184 23 9 chr17 32465083 32465301 -57039252 + MER58A DNA MER1_type 1 221 -3 2504 89 0 0 chr17 32465350 32465653 -57038900 + AluSx SINE Alu 1 303 -9 343 296 201 0 chr17 32466020 32466199 -57038354 - L1M4 LINE L1 -989 5157 4943 1990 149 0 16 chr17 32466302 32466610 -57037943 + AluSx SINE Alu 2 304 -8 359 278 19 19 chr17 32467426 32467588 -57036965 + LTR37B LTR ERV1 226 387 -81 1231 204 60 110 chr17 32467878 32468207 -57036346 - L1MC4 LINE L1 0 8042 7698 333 0 0 0 chr17 32468207 32468244 -57036309 + (TA)n Simple_repeat Simple_repeat 1 37 0 2513 65 0 16 chr17 32468244 32468550 -57036003 - AluSg SINE Alu -9 301 1 1231 204 60 110 chr17 32468550 32468782 -57035771 - L1MC4 LINE L1 -342 7700 7508 24 0 0 0 chr17 32468816 32468840 -57035713 + AT_rich Low_complexity Low_complexity 1 24 0 1596 163 7 31 chr17 32469549 32469667 -57034886 + AluJb SINE Alu 21 140 -172 2421 46 0 7 chr17 32469667 32469975 -57034578 + AluY SINE Alu 4 309 0 1596 163 7 31 chr17 32469975 32470149 -57034404 + AluJb SINE Alu 140 307 -5 2193 109 3 0 chr17 32470167 32470484 -57034069 - AluSx SINE Alu 0 318 1 1892 145 32 0 chr17 32470490 32470772 -57033781 - AluJb SINE Alu -20 292 2 1587 181 50 20 chr17 32470894 32471193 -57033360 - AluJo SINE Alu -4 308 1 358 317 67 22 chr17 32471476 32471656 -57032897 + MIR SINE MIR 20 207 -55 1492 156 9 103 chr17 32472212 32472532 -57032021 - AluJo SINE Alu -22 290 1 1236 171 94 14 chr17 32472585 32472860 -57031693 - L1MA5A LINE L1 -44 6253 5957 873 295 105 47 chr17 32472926 32472983 -57031570 + L2 LINE L2 2045 2097 -1216 1777 100 4 8 chr17 32472983 32473264 -57031289 - AluSx SINE Alu 0 323 44 873 295 105 47 chr17 32473264 32473839 -57030714 + L2 LINE L2 2097 2637 -676 2531 82 0 0 chr17 32473839 32474143 -57030410 + AluSx SINE Alu 1 304 -8 873 295 105 47 chr17 32474143 32474556 -57029997 + L2 LINE L2 2637 3172 -141 1239 147 57 0 chr17 32474556 32474801 -57029752 - L1MA4 LINE L1 -3 6297 6039 873 295 105 47 chr17 32474801 32474940 -57029613 + L2 LINE L2 3172 3302 -11 2143 133 0 16 chr17 32475730 32476046 -57028507 + AluJo SINE Alu 1 311 -1 513 322 6 17 chr17 32476065 32476242 -57028311 + MIR SINE MIR 31 205 -57 1612 104 133 0 chr17 32476243 32476484 -57028069 + AluSx SINE Alu 40 312 0 2281 122 0 0 chr17 32476940 32477235 -57027318 - AluSx SINE Alu -17 295 1 2164 120 0 3 chr17 32477263 32477555 -57026998 + AluSx SINE Alu 1 291 -21 812 254 92 55 chr17 32477682 32478205 -57026348 - MER34 LTR ERV1 0 542 1 1686 138 48 0 chr17 32478890 32479159 -57025394 - AluJb SINE Alu -20 292 11 870 200 68 89 chr17 32479452 32479822 -57024731 - MER92B LTR ERV1 -4 632 271 207 250 0 0 chr17 32480212 32480260 -57024293 + G-rich Low_complexity Low_complexity 3 50 0 318 257 23 35 chr17 32480402 32480573 -57023980 + (TCTCTG)n Simple_repeat Simple_repeat 5 173 0 324 289 41 25 chr17 32480702 32480823 -57023730 - MIR SINE MIR -83 179 57 256 340 57 7 chr17 32481253 32481394 -57023159 + MER103 DNA DNA 18 165 -1 292 241 218 0 chr17 32481632 32481719 -57022834 - MER91C DNA MER1_type -34 106 1 288 223 65 115 chr17 32481913 32482052 -57022501 + MIR SINE MIR 47 178 -84 207 0 0 0 chr17 32482146 32482169 -57022384 + (TTA)n Simple_repeat Simple_repeat 2 24 0 430 243 71 30 chr17 32482991 32483160 -57021393 + MIR SINE MIR 21 196 -66 1019 167 6 0 chr17 32483405 32483573 -57020980 - AluJo SINE Alu -23 289 121 332 289 19 0 chr17 32484076 32484180 -57020373 + MER103 DNA DNA 36 141 -25 532 176 0 0 chr17 32484299 32484384 -57020169 - AluS SINE Alu -227 86 2 574 82 0 0 chr17 32484385 32484458 -57020095 - AluJ/FRAM SINE Alu -16 296 224 204 214 162 68 chr17 32484458 32484575 -57019978 + MER5A DNA MER1_type 61 188 -1 778 178 13 26 chr17 32484595 32484643 -57019910 - MER5B DNA MER1_type -12 166 119 2216 109 0 13 chr17 32484643 32484956 -57019597 + AluSx SINE Alu 1 309 -3 778 178 13 26 chr17 32484956 32485059 -57019494 - MER5B DNA MER1_type -59 119 17 276 290 9 48 chr17 32485149 32485265 -57019288 - MIR SINE MIR -86 122 11 2240 107 3 0 chr17 32485289 32485599 -57018954 - AluSx SINE Alu -1 311 1 520 308 72 21 chr17 32485847 32486084 -57018469 + MIR SINE MIR 8 256 -6 1789 69 4 4 chr17 32486233 32486465 -57018088 - AluSq SINE Alu -79 234 3 2021 135 3 3 chr17 32486471 32486783 -57017770 - AluSx SINE Alu 0 312 1 2231 109 3 0 chr17 32487109 32487420 -57017133 - AluSq SINE Alu -1 312 1 2039 139 7 0 chr17 32487421 32487731 -57016822 - AluJb SINE Alu 0 312 1 282 289 141 21 chr17 32487765 32487907 -57016646 - MIR3 SINE MIR -40 168 10 224 259 161 0 chr17 32487957 32488038 -57016515 - MER5A DNA MER1_type -46 143 50 186 43 0 0 chr17 32488184 32488207 -57016346 + (A)n Simple_repeat Simple_repeat 1 23 0 1855 145 29 10 chr17 32488218 32488529 -57016024 + 7SLRNA srpRNA srpRNA 1 317 -3 2147 81 0 42 chr17 32488529 32488837 -57015716 + AluSc SINE Alu 1 296 -13 688 278 90 4 chr17 32488924 32489158 -57015395 + MIR SINE MIR 1 254 -8 202 303 37 46 chr17 32489141 32489250 -57015303 - MIR SINE MIR -94 168 61 * 2031 94 3 24 chr17 32489776 32490105 -57014448 - AluSx SINE Alu 0 323 1 367 260 136 2 chr17 32491043 32491155 -57013398 + MIR SINE MIR 37 153 -60 513 170 114 54 chr17 32491164 32491235 -57013318 - MER69 DNA AcHobo -4 2522 2457 2239 91 0 3 chr17 32491235 32491531 -57013022 + AluSc SINE Alu 1 295 -14 513 170 114 54 chr17 32491531 32491648 -57012905 - MER69 DNA AcHobo -69 2457 8 411 226 59 10 chr17 32491659 32491761 -57012792 + MIR SINE MIR 156 262 0 223 306 56 0 chr17 32491859 32491931 -57012622 - L2 LINE L2 0 3272 3197 1773 129 33 40 chr17 32492035 32492337 -57012216 + AluJb SINE Alu 1 300 -12 237 344 53 38 chr17 32492543 32492674 -57011879 - MIR3 SINE MIR -41 167 35 395 253 62 34 chr17 32493332 32493478 -57011075 - MIR SINE MIR -19 243 94 1743 172 7 7 chr17 32493755 32494051 -57010502 - AluJb SINE Alu -16 296 1 442 257 135 0 chr17 32494150 32494298 -57010255 - MIR SINE MIR -48 214 47 2215 81 7 3 chr17 32494568 32494864 -57009689 + AluSq SINE Alu 1 297 -16 290 280 121 38 chr17 32495194 32495433 -57009120 - L2 LINE L2 -59 3254 2996 2237 105 3 0 chr17 32495437 32495742 -57008811 + AluSx SINE Alu 1 306 -6 324 301 103 0 chr17 32495879 32495944 -57008609 - L2 LINE L2 -560 2754 2697 1827 142 7 0 chr17 32495944 32496232 -57008321 + AluJo SINE Alu 1 290 -22 324 301 103 0 chr17 32496232 32496312 -57008241 - L2 LINE L2 -617 2697 2594 852 276 47 0 chr17 32496604 32496861 -57007692 + LTR16A LTR ERVL 129 397 -53 294 254 26 53 chr17 32496864 32496978 -57007575 - L2 LINE L2 -1018 2296 2186 2062 126 10 0 chr17 32497073 32497374 -57007179 + AluSx SINE Alu 1 304 -8 944 98 0 15 chr17 32497394 32497566 -57006987 + AluSg/x SINE Alu 152 321 0 318 254 206 5 chr17 32497703 32497892 -57006661 - L2 LINE L2 -1645 1669 1443 201 266 107 112 chr17 32498143 32498207 -57006346 - MIR SINE MIR -49 213 150 3540 183 42 22 chr17 32498207 32498847 -57005706 - MER82 DNA MER2_type 0 653 1 2318 103 0 0 chr17 32498850 32499162 -57005391 - AluSx SINE Alu 0 312 1 201 266 107 112 chr17 32499162 32499262 -57005291 - MIR SINE MIR -114 148 46 1122 155 82 5 chr17 32500432 32500651 -57003902 + MIR SINE MIR 6 241 -21 2270 88 14 0 chr17 32500674 32500971 -57003582 - AluSx SINE Alu -11 301 1 277 257 229 0 chr17 32501742 32501851 -57002702 + MIR SINE MIR 102 235 -27 263 304 43 17 chr17 32502329 32502444 -57002109 - L2 LINE L2 -213 3059 2942 290 248 248 0 chr17 32502494 32502607 -57001946 + MIR3 SINE MIR 67 207 -1 382 264 124 3 chr17 32502695 32502853 -57001700 - MIR SINE MIR -58 150 3 2231 79 9 22 chr17 32503186 32503502 -57001051 + AluSx SINE Alu 1 312 0 450 232 109 62 chr17 32503531 32503742 -57000811 + L2 LINE L2 3091 3311 -2 285 131 0 0 chr17 32503743 32503804 -57000749 + (TGAA)n Simple_repeat Simple_repeat 1 61 0 378 263 42 111 chr17 32503872 32504062 -57000491 - MER5B DNA MER1_type -1 177 1 208 323 50 0 chr17 32504722 32504821 -56999732 - MIR3 SINE MIR -12 196 93 1979 131 26 3 chr17 32504989 32505294 -56999259 + AluSx SINE Alu 1 312 0 2327 94 0 0 chr17 32505591 32505899 -56998654 + AluSg SINE Alu 1 308 -2 361 270 16 48 chr17 32506008 32506134 -56998419 + MIR SINE MIR 22 143 -65 900 167 0 42 chr17 32506606 32506743 -56997810 + FRAM SINE Alu 1 131 -181 2213 105 7 0 chr17 32506743 32507049 -56997504 - AluSx SINE Alu -4 308 1 900 167 0 42 chr17 32507049 32507079 -56997474 + FRAM SINE Alu 131 161 -15 749 312 57 0 chr17 32507451 32507698 -56996855 - MIR SINE MIR 0 262 2 348 317 156 27 chr17 32507725 32507949 -56996604 - MIR SINE MIR -2 260 8 357 243 147 15 chr17 32508443 32508579 -56995974 - MIR SINE MIR -84 178 25 2080 96 0 0 chr17 32508632 32508903 -56995650 + AluSg SINE Alu 1 271 -39 204 40 0 0 chr17 32508914 32508939 -56995614 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1188 132 28 38 chr17 32508939 32509151 -56995402 - AluJo SINE Alu -30 282 73 499 262 0 10 chr17 32509152 32509255 -56995298 - AluJo/FLAM SINE Alu -209 103 2 246 160 0 0 chr17 32509634 32509684 -56994869 + (TG)n Simple_repeat Simple_repeat 2 51 0 579 104 179 0 chr17 32509972 32510078 -56994475 - FLAM_C SINE Alu -17 126 2 182 37 37 0 chr17 32510631 32510658 -56993895 + (CCCCCG)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr17 32510759 32510781 -56993772 + GC_rich Low_complexity Low_complexity 1 22 0 25 95 0 0 chr17 32510949 32511023 -56993530 + GC_rich Low_complexity Low_complexity 1 74 0 1628 154 20 33 chr17 32513223 32513529 -56991024 - AluJb SINE Alu -10 302 1 651 270 255 27 chr17 32513958 32514362 -56990191 - L2 LINE L2 -4 3309 2814 302 289 21 31 chr17 32516341 32516438 -56988115 + MIR SINE MIR 34 129 -79 739 214 0 31 chr17 32516852 32517011 -56987542 + MIR SINE MIR 31 184 -78 329 219 0 14 chr17 32517016 32517089 -56987464 + MIR SINE MIR 153 224 -38 798 161 0 56 chr17 32517305 32517448 -56987105 - AluSq/x SINE Alu -176 136 2 1682 173 44 0 chr17 32518039 32518334 -56986219 - AluJo SINE Alu -4 308 1 343 277 88 0 chr17 32518629 32518766 -56985787 + MER104 DNA Tc2 29 177 -3 271 294 0 35 chr17 32518896 32518981 -56985572 + MIR SINE MIR 49 130 -132 228 275 184 18 chr17 32519580 32519689 -56984864 + MIR SINE MIR 34 160 -102 185 239 0 65 chr17 32519675 32519721 -56984832 + L2 LINE L2 3218 3260 -12 * 2217 99 0 0 chr17 32519754 32520057 -56984496 + AluSx SINE Alu 1 303 -9 2165 119 0 3 chr17 32522017 32522327 -56982226 - AluSc SINE Alu 0 309 1 2457 67 0 0 chr17 32523415 32523713 -56980840 + AluSc SINE Alu 1 298 -11 1965 131 28 103 chr17 32523935 32524165 -56980388 - MER47A DNA MER2_type -1957 366 120 2074 70 70 0 chr17 32524165 32524184 -56980369 - AluY SINE Alu -4 307 291 207 69 0 0 chr17 32524184 32524213 -56980340 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2074 70 70 0 chr17 32524213 32524480 -56980073 - AluY SINE Alu -20 291 1 1965 131 28 103 chr17 32524480 32524608 -56979945 - MER47A DNA MER2_type -2203 120 38 1838 142 0 26 chr17 32524608 32524910 -56979643 + AluSx SINE Alu 3 296 -16 1965 131 28 103 chr17 32524910 32524946 -56979607 - MER47A DNA MER2_type -2285 38 1 2180 120 0 0 chr17 32524969 32525269 -56979284 + AluSx SINE Alu 1 300 -12 2252 117 29 81 chr17 32525407 32525689 -56978864 - MLT1B LTR MaLR -2 388 131 2148 99 0 0 chr17 32525689 32525992 -56978561 - AluSx SINE Alu 0 316 14 2252 117 29 81 chr17 32525992 32526117 -56978436 - MLT1B LTR MaLR -259 131 1 1098 130 5 14 chr17 32526522 32526730 -56977823 + L1M1 LINE L1 5289 5494 -811 2244 86 0 3 chr17 32526802 32527103 -56977450 - AluY SINE Alu -11 300 1 950 90 0 15 chr17 32527107 32527240 -56977313 - AluSg SINE Alu -179 131 1 246 248 86 71 chr17 32527310 32527520 -56977033 - L1MC5 LINE L1 -248 7713 7501 439 226 11 0 chr17 32527523 32527616 -56976937 + MER5A DNA MER1_type 1 94 -95 364 327 148 25 chr17 32527956 32528234 -56976319 - L1M4 LINE L1 -3465 2681 2370 * 381 325 79 32 chr17 32528143 32528395 -56976158 + L1MCa LINE L1 1906 2169 -4257 1208 142 119 51 chr17 32528409 32528662 -56975891 - AluJo SINE Alu -31 281 12 289 246 71 0 chr17 32528784 32528910 -56975643 - L1M4 LINE L1 -3891 2255 2121 5613 128 20 21 chr17 32528931 32529672 -56974881 - L1MA6 LINE L1 -5 6295 5554 2250 95 0 3 chr17 32529672 32529967 -56974586 + AluSg SINE Alu 3 296 -14 5613 128 20 21 chr17 32529967 32530267 -56974286 - L1MA6 LINE L1 -746 5554 5255 678 256 0 0 chr17 32530331 32530464 -56974089 - FLAM_A SINE Alu 0 133 1 249 33 0 0 chr17 32530483 32530513 -56974040 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1778 138 35 7 chr17 32530518 32530800 -56973753 - AluJb SINE Alu -22 290 1 402 186 0 0 chr17 32531834 32531904 -56972649 + AluJ SINE Alu 68 137 -175 719 165 0 9 chr17 32533550 32533665 -56970888 + AluJ SINE Alu 140 253 -59 228 22 43 43 chr17 32533671 32533717 -56970836 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 492 252 157 52 chr17 32533718 32533928 -56970625 - MIR SINE MIR -14 248 17 230 397 26 9 chr17 32534040 32534156 -56970397 - MIR3 SINE MIR -87 121 4 425 267 47 33 chr17 32534958 32535108 -56969445 - MIR SINE MIR -96 166 15 225 0 0 0 chr17 32537672 32537697 -56966856 + (CCCTG)n Simple_repeat Simple_repeat 2 26 0 445 335 78 0 chr17 32537697 32537864 -56966689 + MIR SINE MIR 77 256 -6 390 313 127 0 chr17 32538729 32538879 -56965674 - MIR SINE MIR -13 249 81 4017 82 35 105 chr17 32539046 32539140 -56965413 - MER51A LTR ERV1 -2 632 533 2143 92 7 0 chr17 32539140 32539434 -56965119 - AluY SINE Alu -10 301 6 4017 82 35 105 chr17 32539434 32540018 -56964535 - MER51A LTR ERV1 -101 533 1 386 344 162 20 chr17 32540533 32540780 -56963773 + L1ME4a LINE L1 5562 5843 -278 1090 149 6 0 chr17 32540882 32541050 -56963503 + AluJ SINE Alu 135 303 -9 332 318 83 8 chr17 32541052 32541104 -56963449 + L1ME4a LINE L1 5885 5932 -189 2207 127 3 0 chr17 32541104 32541420 -56963133 + 7SLRNA srpRNA srpRNA 1 317 -3 332 318 83 8 chr17 32541420 32541499 -56963054 + L1ME4a LINE L1 5932 6026 -95 1251 109 0 0 chr17 32541501 32541675 -56962878 - AluSc SINE Alu -7 302 129 2518 71 0 0 chr17 32541675 32541986 -56962567 - AluY SINE Alu 0 311 1 345 203 27 0 chr17 32542323 32542397 -56962156 + MER116 DNA Mariner 4 79 -1 1562 126 74 4 chr17 32542524 32542793 -56961760 + AluSx SINE Alu 22 309 -3 1233 151 10 0 chr17 32542799 32543005 -56961548 - MER2 DNA MER2_type -135 210 3 308 111 79 0 chr17 32543090 32543153 -56961400 - MER41B LTR ERV1 -86 549 482 2414 62 3 0 chr17 32543168 32543475 -56961078 - AluY SINE Alu 0 311 4 325 331 45 90 chr17 32543485 32543730 -56960823 - L1ME4a LINE L1 -281 5840 5607 227 176 137 0 chr17 32547954 32548005 -56956548 - MIR SINE MIR -88 174 117 2062 75 82 0 chr17 32549336 32549615 -56954938 + AluSc SINE Alu 1 302 -7 1872 136 27 7 chr17 32549990 32550291 -56954262 + AluSx SINE Alu 1 307 -5 324 160 40 40 chr17 32550717 32550792 -56953761 + L1ME4a LINE L1 6046 6120 -1 1042 171 6 0 chr17 32551763 32551938 -56952615 - AluJo/FRAM SINE Alu -4 308 133 1607 166 20 33 chr17 32551939 32552240 -56952313 - AluJo SINE Alu -15 297 1 296 267 0 58 chr17 32554004 32554090 -56950463 + MER5B DNA MER1_type 45 125 -53 405 189 63 0 chr17 32556850 32556945 -56947608 - MER53 DNA DNA 0 189 89 1792 154 25 7 chr17 32556949 32557235 -56947318 - AluJo SINE Alu -21 291 1 422 260 39 8 chr17 32557239 32557366 -56947187 - MER5B DNA MER1_type -22 156 26 864 132 7 21 chr17 32557810 32557954 -56946599 + FLAM_C SINE Alu 1 142 -1 788 189 24 12 chr17 32557982 32558151 -56946402 - MER5B DNA MER1_type 0 178 8 917 111 0 42 chr17 32558885 32559029 -56945524 + AluSq/x SINE Alu 1 138 -175 2223 123 0 0 chr17 32561588 32561898 -56942655 - AluSx SINE Alu -2 310 1 357 150 0 0 chr17 32561943 32562003 -56942550 + MER53 DNA DNA 2 61 -128 473 137 63 40 chr17 32562008 32562146 -56942407 - MLT1C LTR MaLR -262 128 1 245 306 117 68 chr17 32562485 32562750 -56941803 - L2 LINE L2 -18 3254 2977 383 256 109 29 chr17 32562965 32563102 -56941451 + MER5B DNA MER1_type 28 175 -3 206 263 79 35 chr17 32563123 32563237 -56941316 - L2 LINE L2 -266 3047 2929 1176 232 52 7 chr17 32563385 32563695 -56940858 - MLT1B LTR MaLR -8 382 59 587 238 199 0 chr17 32564106 32564287 -56940266 - MIR SINE MIR -12 250 34 370 224 58 129 chr17 32565392 32565515 -56939038 + MLT1H1 LTR MaLR 33 163 -392 1957 104 58 4 chr17 32565515 32565793 -56938760 - AluSq SINE Alu -20 293 1 370 224 58 129 chr17 32565793 32566087 -56938466 + MLT1H1 LTR MaLR 163 555 0 2241 107 0 0 chr17 32566199 32566507 -56938046 + AluSc SINE Alu 1 308 -1 194 185 56 56 chr17 32566742 32566796 -56937757 - MIR SINE MIR -55 153 100 792 241 103 53 chr17 32566913 32567395 -56937158 - MLT1H LTR MaLR 0 549 1 2024 111 3 3 chr17 32567396 32567685 -56936868 - AluSx SINE Alu -22 290 2 2515 62 0 0 chr17 32567711 32568020 -56936533 + AluY SINE Alu 1 309 -2 2166 91 0 30 chr17 32568040 32568337 -56936216 + AluSc SINE Alu 1 288 -21 764 230 120 23 chr17 32568343 32568560 -56935993 + L2 LINE L2 3076 3313 0 1730 129 0 0 chr17 32568777 32569025 -56935528 - AluSg SINE Alu -1 309 62 2060 127 3 3 chr17 32569067 32569359 -56935194 - AluSx SINE Alu -20 292 1 2196 140 42 100 chr17 32569359 32569830 -56934723 - L1MC1 LINE L1 0 6333 5897 2023 181 70 0 chr17 32569830 32570200 -56934353 - MSTD LTR MaLR 0 396 1 2196 140 42 100 chr17 32570200 32570277 -56934276 - L1MC1 LINE L1 -436 5897 5817 605 189 105 0 chr17 32570279 32570422 -56934131 - L1MC1 LINE L1 -2 6331 6174 1417 196 53 18 chr17 32570431 32570716 -56933837 - AluJo SINE Alu -17 295 1 1350 191 86 27 chr17 32570716 32571116 -56933437 - L1 LINE L1 -816 5330 4904 494 65 0 0 chr17 32571123 32571185 -56933368 - AluSg SINE Alu -247 62 1 2141 103 14 3 chr17 32571218 32571510 -56933043 + AluSq SINE Alu 1 295 -18 236 226 0 75 chr17 32572222 32572315 -56932238 + C-rich Low_complexity Low_complexity 4 89 0 207 229 0 72 chr17 32572603 32572686 -56931867 + G-rich Low_complexity Low_complexity 4 80 0 229 286 16 0 chr17 32572751 32572814 -56931739 + tRNA-Arg-AGG tRNA tRNA 5 68 -8 23 68 0 0 chr17 32573014 32573058 -56931495 + GC_rich Low_complexity Low_complexity 1 44 0 461 327 107 21 chr17 32573388 32573669 -56930884 - L3 LINE CR1 -356 1221 917 2576 32 0 10 chr17 32573999 32574309 -56930244 - AluY SINE Alu -4 307 1 933 148 0 0 chr17 32574408 32574543 -56930010 + AluJo SINE Alu 1 135 -177 1855 139 10 7 chr17 32574543 32574831 -56929722 + AluSx SINE Alu 2 290 -22 256 376 16 0 chr17 32575124 32575249 -56929304 + MIR3 SINE MIR 76 202 -6 2404 81 7 0 chr17 32575662 32575969 -56928584 - AluSq SINE Alu -4 309 1 555 294 9 35 chr17 32576265 32576496 -56928057 - L1MC5 LINE L1 -447 7514 7290 291 333 12 0 chr17 32576680 32576761 -56927792 - L2 LINE L2 -205 3067 2986 253 236 56 11 chr17 32577010 32577099 -56927454 - MIR3 SINE MIR -40 168 76 255 212 91 0 chr17 32577516 32577582 -56926971 - LTR16A LTR ERVL -346 104 33 214 371 10 23 chr17 32578109 32578285 -56926268 - MIR3 SINE MIR -2 206 30 1673 120 93 0 chr17 32578529 32578814 -56925739 + AluSx SINE Alu 1 309 0 327 287 148 36 chr17 32578863 32579086 -56925467 - MER112 DNA MER1_type -12 248 1 1885 145 0 43 chr17 32579132 32579457 -56925096 - AluJb SINE Alu -1 311 1 364 226 0 52 chr17 32579457 32579572 -56924981 + MER113 DNA MER1_type? 4 112 -409 1515 116 104 37 chr17 32580581 32580849 -56923704 - AluJo SINE Alu -26 286 1 29 90 0 0 chr17 32581473 32581551 -56923002 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 32581829 32581852 -56922701 + GC_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr17 32582242 32582271 -56922282 + GC_rich Low_complexity Low_complexity 1 29 0 424 286 171 6 chr17 32585498 32585673 -56918880 + MIR SINE MIR 27 230 -32 24 53 0 0 chr17 32585714 32585752 -56918801 + AT_rich Low_complexity Low_complexity 1 38 0 2173 128 0 0 chr17 32585752 32586064 -56918489 - AluSx SINE Alu 0 312 1 291 140 0 0 chr17 32586066 32586116 -56918437 + (T)n Simple_repeat Simple_repeat 1 50 0 1739 148 50 3 chr17 32586116 32586414 -56918139 - AluSx SINE Alu 0 312 1 28 0 0 0 chr17 32586414 32586442 -56918111 + AT_rich Low_complexity Low_complexity 1 28 0 257 287 85 11 chr17 32586611 32586705 -56917848 + MIR SINE MIR 9 109 -153 200 169 62 77 chr17 32586805 32586870 -56917683 - L2 LINE L2 -35 3237 3174 261 301 139 54 chr17 32588277 32588443 -56916110 + MIR SINE MIR 56 235 -27 954 157 0 30 chr17 32588839 32588851 -56915702 + AluJo SINE Alu 122 133 -179 1562 184 10 16 chr17 32588851 32589155 -56915398 + AluJo SINE Alu 1 302 -10 954 157 0 30 chr17 32589155 32589308 -56915245 + AluJo SINE Alu 133 282 -30 2026 143 82 6 chr17 32590143 32590734 -56913819 - MER39 LTR ERV1 0 707 4 796 144 0 8 chr17 32591809 32591927 -56912626 - FLAM_C SINE Alu -25 118 2 941 230 127 3 chr17 32592646 32592937 -56911616 + MER46C DNA MER2_type 1 327 -11 383 269 8 50 chr17 32593188 32593248 -56911305 - MER58A DNA MER1_type -226 115 61 2164 125 0 10 chr17 32593248 32593560 -56910993 + AluSx SINE Alu 1 309 -3 383 269 8 50 chr17 32593560 32593618 -56910935 - MER58A DNA MER1_type -280 61 2 409 255 98 26 chr17 32594846 32594999 -56909554 - MER46C DNA MER2_type -174 164 1 258 295 208 7 chr17 32595461 32595610 -56908943 - MER5A DNA MER1_type 0 189 11 203 222 143 16 chr17 32595696 32595759 -56908794 - L2 LINE L2 -209 3063 2993 591 257 109 0 chr17 32595762 32595945 -56908608 - MIR SINE MIR 0 262 60 323 267 69 69 chr17 32596406 32596537 -56908016 - MIR SINE MIR -71 191 61 1474 144 0 0 chr17 32598636 32598858 -56905695 + AluSg/x SINE Alu 86 307 -5 2068 164 42 6 chr17 32599069 32599404 -56905149 + MER7A DNA MER2_type 1 345 -1 2121 104 3 22 chr17 32599464 32599780 -56904773 - AluSg SINE Alu 0 310 1 1952 134 3 7 chr17 32599803 32600108 -56904445 - AluSx SINE Alu -8 304 1 1939 155 0 3 chr17 32600809 32601112 -56903441 - AluJb SINE Alu -10 302 1 2205 93 0 26 chr17 32601161 32601474 -56903079 - AluY SINE Alu -6 305 1 304 292 139 15 chr17 32601525 32601584 -56902969 - L1ME4a LINE L1 -1 6120 6070 1702 164 0 3 chr17 32601584 32601894 -56902659 + AluJb SINE Alu 1 309 0 304 292 139 15 chr17 32601894 32601970 -56902583 - L1ME4a LINE L1 -51 6070 5967 389 259 23 38 chr17 32602263 32602394 -56902159 + MER5B DNA MER1_type 1 129 -49 1268 153 90 60 chr17 32602405 32602576 -56901977 - AluJo SINE Alu -2 310 125 2175 111 0 0 chr17 32602576 32602882 -56901671 - AluSx SINE Alu -4 308 3 1268 153 90 60 chr17 32602882 32603011 -56901542 - AluJo SINE Alu -187 125 1 285 287 66 25 chr17 32603215 32603337 -56901216 - MIR SINE MIR -62 146 20 241 250 44 0 chr17 32603581 32603649 -56900904 - MIR SINE MIR -113 149 79 987 260 80 31 chr17 32605262 32605555 -56898998 + MLT1K LTR MaLR 36 427 -161 2159 96 20 3 chr17 32605555 32605856 -56898697 + AluY SINE Alu 1 306 -5 987 260 80 31 chr17 32605856 32605967 -56898586 + MLT1K LTR MaLR 427 531 -57 1989 150 0 6 chr17 32606003 32606317 -56898236 - AluJo SINE Alu 0 312 1 225 158 0 0 chr17 32606318 32606356 -56898197 + MLT1K LTR MaLR 522 559 -29 1839 206 47 49 chr17 32606414 32606925 -56897628 - L1ME1 LINE L1 -5 6161 5652 355 253 42 0 chr17 32606927 32607022 -56897531 - MIR3 SINE MIR -48 160 62 353 249 181 35 chr17 32607165 32607373 -56897180 + MLT1K LTR MaLR 3 239 -349 375 23 0 0 chr17 32607773 32607817 -56896736 + (ATG)n Simple_repeat Simple_repeat 3 46 0 256 159 125 102 chr17 32607858 32607946 -56896607 - MIR3 SINE MIR -15 193 104 190 132 0 79 chr17 32608472 32608510 -56896043 - MIR SINE MIR -207 55 21 28 0 0 26 chr17 32608575 32608591 -56895962 + AT_rich Low_complexity Low_complexity 1 16 -22 2105 126 3 0 chr17 32608591 32608901 -56895652 - AluSx SINE Alu -1 311 1 28 0 0 26 chr17 32608901 32608923 -56895630 + AT_rich Low_complexity Low_complexity 16 38 0 264 108 0 0 chr17 32608926 32608963 -56895590 - FLAM SINE Alu -15 118 82 777 142 0 0 chr17 32608986 32609099 -56895454 - FLAM_C SINE Alu -25 118 6 189 303 32 103 chr17 32609311 32609466 -56895087 + MIR SINE MIR 59 202 -60 1046 291 80 54 chr17 32609540 32610025 -56894528 + MLT1K LTR MaLR 91 588 0 287 257 143 0 chr17 32610159 32610264 -56894289 + L2 LINE L2 3194 3313 0 199 274 39 0 chr17 32610865 32610916 -56893637 - MIR SINE MIR -65 143 91 275 260 190 40 chr17 32611209 32611409 -56893144 + MLT1K LTR MaLR 10 239 -349 2079 114 17 0 chr17 32611468 32611766 -56892787 + AluSq SINE Alu 1 303 -10 1178 209 0 4 chr17 32611948 32612178 -56892375 - MER46A DNA MER2_type 0 236 8 392 242 36 68 chr17 32612184 32612432 -56892121 - HAL1 LINE L1 -46 2461 2222 2175 95 0 7 chr17 32612493 32612789 -56891764 + AluSx SINE Alu 1 294 -18 1128 101 0 6 chr17 32612914 32613072 -56891481 - AluYa5 SINE Alu -10 301 145 1011 38 15 15 chr17 32613183 32613314 -56891239 - AluY SINE Alu -180 131 1 189 0 0 0 chr17 32613375 32613396 -56891157 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1665 156 30 0 chr17 32613396 32613665 -56890888 - AluJo SINE Alu -33 279 3 1473 167 110 3 chr17 32613678 32613960 -56890593 - AluJb SINE Alu 0 312 1 231 236 56 0 chr17 32614058 32614130 -56890423 + MLT1K LTR MaLR 513 588 0 489 242 65 8 chr17 32614202 32614326 -56890227 + MER45A DNA AcHobo 4 134 -44 266 228 158 44 chr17 32614597 32614711 -56889842 - MIR SINE MIR -112 150 24 339 309 59 7 chr17 32614735 32614871 -56889682 + MIR3 SINE MIR 37 179 -29 2150 243 70 43 chr17 32614871 32615092 -56889461 + L1MC5 LINE L1 7070 7284 -677 189 0 0 0 chr17 32615092 32615113 -56889440 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 423 0 0 0 chr17 32615112 32615159 -56889394 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2150 243 70 43 chr17 32615113 32615345 -56889208 + L1MC5 LINE L1 7284 7508 -453 2352 86 0 0 chr17 32615345 32615647 -56888906 + AluSq SINE Alu 2 303 -10 2150 243 70 43 chr17 32615647 32615918 -56888635 + L1MC5 LINE L1 7508 7770 -191 2001 112 3 7 chr17 32615918 32616204 -56888349 + AluSx SINE Alu 1 285 -27 222 37 0 0 chr17 32616204 32616231 -56888322 + (CA)n Simple_repeat Simple_repeat 2 28 0 2150 243 70 43 chr17 32616231 32616369 -56888184 + L1MC5 LINE L1 7769 7911 -50 198 242 65 0 chr17 32616925 32616987 -56887566 + MIR SINE MIR 81 146 -62 363 200 39 12 chr17 32617048 32617141 -56887412 - MER20B DNA MER1_type -90 129 32 226 288 16 124 chr17 32617264 32617521 -56887032 - L2 LINE L2 -231 3041 2813 1893 110 0 0 chr17 32617527 32617817 -56886736 - AluSx SINE Alu 0 320 31 1418 167 49 19 chr17 32618056 32618343 -56886210 - AluJo SINE Alu 0 306 12 195 208 10 115 chr17 32618510 32618606 -56885947 - L2 LINE L2 -75 3238 3153 205 318 131 9 chr17 32620031 32620138 -56884415 - MIR SINE MIR -49 213 94 248 310 43 35 chr17 32620340 32620456 -56884097 + L2 LINE L2 3136 3252 -20 438 282 77 45 chr17 32622281 32622321 -56882232 - MIR3 SINE MIR -8 200 163 1897 133 3 56 chr17 32622321 32622644 -56881909 - AluSx SINE Alu -6 306 1 438 282 77 45 chr17 32622644 32622759 -56881794 - MIR3 SINE MIR -45 163 40 2092 119 3 10 chr17 32622994 32623297 -56881256 + AluSx SINE Alu 1 301 -11 239 254 16 16 chr17 32623665 32623728 -56880825 + MIR SINE MIR 76 138 -70 1144 229 99 3 chr17 32623831 32624133 -56880420 + MLT1D LTR MaLR 169 499 -6 2516 58 0 3 chr17 32624365 32624676 -56879877 - AluY SINE Alu -1 310 1 2237 105 0 0 chr17 32624676 32624982 -56879571 - AluSx SINE Alu -6 306 1 2004 112 0 36 chr17 32624982 32625287 -56879266 - AluSc SINE Alu -15 294 1 273 151 0 0 chr17 32625379 32625432 -56879121 + (CA)n Simple_repeat Simple_repeat 1 53 0 1139 134 93 10 chr17 32625753 32625947 -56878606 + MER6B DNA MER2_type 1 210 0 722 319 86 9 chr17 32626514 32626840 -56877713 - L1ME4a LINE L1 -189 5932 5582 300 179 0 0 chr17 32627148 32627204 -56877349 + MIR SINE MIR 105 160 -102 258 333 10 10 chr17 32627843 32627942 -56876611 - MER5A DNA MER1_type -25 164 66 299 261 68 0 chr17 32628064 32628122 -56876431 + MER5B DNA MER1_type 6 73 -105 2670 10 0 3 chr17 32628122 32628423 -56876130 + AluYa5 SINE Alu 1 300 -11 299 261 68 0 chr17 32628423 32628452 -56876101 + MER5B DNA MER1_type 73 99 -79 283 270 146 66 chr17 32628474 32628611 -56875942 + MIR3 SINE MIR 11 158 -50 498 285 20 13 chr17 32628618 32628769 -56875784 + MER117 DNA MER1_type 8 159 -38 1954 119 0 44 chr17 32629085 32629404 -56875149 + AluSq SINE Alu 1 305 -8 249 258 0 0 chr17 32629617 32629710 -56874843 + (TCCA)n Simple_repeat Simple_repeat 4 96 0 2128 109 0 0 chr17 32629850 32630124 -56874429 + AluSg SINE Alu 1 274 -36 625 273 79 73 chr17 32630125 32630466 -56874087 - L2 LINE L2 -81 3232 2887 2515 69 3 0 chr17 32630466 32630769 -56873784 + AluY SINE Alu 1 304 -7 625 273 79 73 chr17 32630769 32630783 -56873770 - L2 LINE L2 -426 2887 2875 3700 143 20 15 chr17 32630783 32630958 -56873595 - MER41B LTR ERV1 0 606 433 192 111 0 0 chr17 32630958 32630994 -56873559 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2147 101 7 0 chr17 32630996 32631283 -56873270 - AluSq SINE Alu -24 289 1 3700 143 20 15 chr17 32631283 32631724 -56872829 - MER41B LTR ERV1 -173 433 1 645 239 47 24 chr17 32631768 32631981 -56872572 - L2 LINE L2 -866 2448 2231 285 319 116 14 chr17 32631997 32632204 -56872349 + MLT1K LTR MaLR 15 242 -346 342 0 0 0 chr17 32632505 32632543 -56872010 + (CA)n Simple_repeat Simple_repeat 2 39 0 430 268 49 0 chr17 32632740 32632882 -56871671 + MIR SINE MIR 38 186 -76 306 316 11 0 chr17 32633450 32633545 -56871008 + MIR SINE MIR 45 140 -122 534 274 31 40 chr17 32633574 32633684 -56870869 + L1MC4a LINE L1 5517 5626 -2182 3906 102 28 2 chr17 32633684 32634224 -56870329 - MER41A LTR ERV1 0 554 1 534 274 31 40 chr17 32634224 32634327 -56870226 + L1MC4a LINE L1 5626 5730 -2078 2267 113 3 0 chr17 32634327 32634637 -56869916 + AluSx SINE Alu 1 311 -1 999 222 14 0 chr17 32634663 32634879 -56869674 + L1MC4a LINE L1 5719 5937 -1871 237 33 0 0 chr17 32634883 32634913 -56869640 + (CA)n Simple_repeat Simple_repeat 2 31 0 265 192 0 26 chr17 32635556 32635634 -56868919 + CT-rich Low_complexity Low_complexity 1 76 0 927 241 19 105 chr17 32635643 32635907 -56868646 + MLT1J LTR MaLR 180 414 -97 2002 156 3 0 chr17 32635907 32636214 -56868339 + AluSx SINE Alu 1 308 -4 927 241 19 105 chr17 32636214 32636264 -56868289 + MLT1J LTR MaLR 414 467 -44 474 287 77 0 chr17 32636412 32636555 -56867998 - MLT1I LTR MaLR -231 178 25 241 304 0 14 chr17 32636588 32636657 -56867896 - MIR SINE MIR -81 127 60 2421 79 0 0 chr17 32636677 32636967 -56867586 + AluSq SINE Alu 11 300 -13 206 297 0 0 chr17 32637707 32637781 -56866772 + A-rich Low_complexity Low_complexity 1 74 0 367 316 43 50 chr17 32637858 32638230 -56866323 + L1MC/D LINE L1 2243 2614 -3532 2484 94 3 0 chr17 32638277 32638586 -56865967 - AluSp SINE Alu -3 310 1 714 303 81 17 chr17 32638656 32638877 -56865676 + L1MC/D LINE L1 4524 4730 -1416 2643 36 7 0 chr17 32638877 32639186 -56865367 + AluY SINE Alu 1 311 0 714 303 81 17 chr17 32639186 32639199 -56865354 + L1MC/D LINE L1 4730 4741 -1405 1930 137 0 7 chr17 32639199 32639484 -56865069 + AluSx SINE Alu 1 283 -29 714 303 81 17 chr17 32639484 32639767 -56864786 + L1MC/D LINE L1 4741 5075 -1071 2385 93 0 19 chr17 32639953 32640266 -56864287 + AluSg SINE Alu 3 309 -1 360 284 120 34 chr17 32640268 32640416 -56864137 + L1MC/D LINE L1 5296 5430 -2378 270 0 0 0 chr17 32640416 32640446 -56864107 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 360 284 120 34 chr17 32640446 32640589 -56863964 + L1MC/D LINE L1 5430 5612 -2196 6050 212 62 52 chr17 32640802 32641770 -56862783 - L1M4c LINE L1 -3093 3551 2594 733 161 7 35 chr17 32641770 32641913 -56862640 - L1MA3 LINE L1 0 6305 6167 6050 212 62 52 chr17 32641913 32641936 -56862617 - L1M4c LINE L1 -4050 2594 2573 2340 88 0 14 chr17 32641936 32642231 -56862322 - AluSc SINE Alu -18 291 1 6050 212 62 52 chr17 32642231 32643109 -56861444 - L1M4c LINE L1 -4071 2573 1705 1951 160 0 0 chr17 32643109 32643409 -56861144 - AluSx SINE Alu -12 300 1 6050 212 62 52 chr17 32643409 32643725 -56860828 - L1M4c LINE L1 -4939 1705 1394 1136 182 186 24 chr17 32643725 32643978 -56860575 + AluSg SINE Alu 1 294 -6 6050 212 62 52 chr17 32643978 32644699 -56859854 - L1M4c LINE L1 -5250 1394 486 2173 91 0 18 chr17 32644699 32645005 -56859548 + AluSx SINE Alu 4 304 0 6050 212 62 52 chr17 32645005 32645301 -56859252 - L1M4c LINE L1 -6158 486 194 251 314 52 57 chr17 32645305 32645691 -56858862 - L1M4 LINE L1 -1195 4951 4568 2434 253 44 59 chr17 32645741 32645853 -56858700 + L1ME3A LINE L1 2901 3013 -3133 2085 122 0 7 chr17 32645853 32646174 -56858379 - AluSx SINE Alu 0 319 1 2434 253 44 59 chr17 32646174 32646203 -56858350 + L1ME3A LINE L1 3013 3041 -3105 2440 169 14 2 chr17 32646203 32646616 -56857937 - MER47B DNA MER2_type 0 418 1 2434 253 44 59 chr17 32646616 32646810 -56857743 + L1ME3A LINE L1 3041 3236 -2910 1693 180 0 7 chr17 32646810 32647120 -56857433 + AluJo SINE Alu 1 308 0 2434 253 44 59 chr17 32647120 32647317 -56857236 + L1ME3A LINE L1 3236 3434 -2712 2053 121 7 0 chr17 32647317 32647597 -56856956 + AluSp SINE Alu 11 292 -21 2434 253 44 59 chr17 32647597 32648124 -56856429 + L1ME3A LINE L1 3434 3949 -2197 703 152 0 0 chr17 32648130 32648242 -56856311 - FLAM_C SINE Alu -2 141 30 2473 227 81 86 chr17 32648258 32648571 -56855982 + L1ME3A LINE L1 3934 4247 -1923 1988 142 4 0 chr17 32648571 32648884 -56855669 - AluSq SINE Alu 0 314 1 2473 227 81 86 chr17 32648884 32649428 -56855125 + L1ME3A LINE L1 4247 4792 -1378 249 33 0 0 chr17 32649428 32649458 -56855095 + (TG)n Simple_repeat Simple_repeat 1 30 0 2473 227 81 86 chr17 32649458 32650233 -56854320 + L1ME3A LINE L1 4792 5558 -612 1848 146 22 0 chr17 32650233 32650507 -56854046 - AluSx SINE Alu -32 280 1 2473 227 81 86 chr17 32650507 32651004 -56853549 + L1ME3A LINE L1 5558 6056 -114 2254 117 0 7 chr17 32651385 32651693 -56852860 - AluSx SINE Alu -6 306 1 184 243 100 0 chr17 32651926 32651996 -56852557 + L3 LINE CR1 80 156 -1421 915 184 25 13 chr17 32652235 32652393 -56852160 - AluJb SINE Alu -16 296 137 1000 271 133 8 chr17 32652509 32652870 -56851683 - MLT1I LTR MaLR -3 406 1 2008 105 0 59 chr17 32653240 32653544 -56851009 + AluSx SINE Alu 1 286 -26 22 0 0 0 chr17 32653576 32653598 -56850955 + AT_rich Low_complexity Low_complexity 1 22 0 749 139 46 26 chr17 32653598 32653749 -56850804 - HERVH LTR ERV1 -7559 154 1 818 98 39 65 chr17 32653749 32653902 -56850651 - LTR7 LTR ERV1 0 450 302 1899 139 25 0 chr17 32654024 32654304 -56850249 - AluSx SINE Alu -25 287 1 1274 154 80 136 chr17 32654304 32654680 -56849873 - MER57A LTR ERV1 -6 397 43 1166 169 250 40 chr17 32654741 32655113 -56849440 + LTR7 LTR ERV1 1 450 0 208 355 43 7 chr17 32655116 32655254 -56849299 + L3 LINE CR1 468 610 -967 737 179 0 0 chr17 32655651 32655763 -56848790 + AluSq/x SINE Alu 1 112 -201 3358 122 18 6 chr17 32655763 32656265 -56848288 + MER9 LTR ERVK 4 511 0 4502 101 30 21 chr17 32656265 32656921 -56847632 + HERVK9 LTR ERVK 1 662 -5254 23521 86 14 1 chr17 32656921 32660801 -56843752 + HERVK9 LTR ERVK 1625 5634 -282 2185 136 11 13 chr17 32660827 32661181 -56843372 + HERVK9 LTR ERVK 5635 5916 0 3380 106 41 4 chr17 32661181 32661674 -56842879 + MER9 LTR ERVK 1 511 0 917 193 0 6 chr17 32661706 32661872 -56842681 + FRAM SINE Alu 1 165 -1 245 207 18 63 chr17 32662094 32662205 -56842348 + L2 LINE L2 3079 3184 -129 483 217 0 0 chr17 32662222 32662314 -56842239 + MER34 LTR ERV1 5 96 -446 2166 115 0 0 chr17 32662391 32662693 -56841860 - AluSx SINE Alu 0 305 4 2244 120 0 0 chr17 32662704 32663003 -56841550 - AluSx SINE Alu -13 299 1 1877 117 0 55 chr17 32663027 32663317 -56841236 - AluSx SINE Alu -15 297 24 1579 160 33 27 chr17 32663486 32663786 -56840767 - AluJo SINE Alu -2 310 9 2198 95 3 0 chr17 32663824 32664107 -56840446 - AluSq SINE Alu -29 284 1 1375 200 20 76 chr17 32664109 32664593 -56839960 + LTR9 LTR ERV1 61 475 -137 594 181 67 48 chr17 32664590 32664779 -56839774 + LTR19C LTR ERV1 351 779 0 * 2114 122 3 3 chr17 32664794 32665088 -56839465 - AluSq SINE Alu -19 294 1 3697 107 10 0 chr17 32665131 32665643 -56838910 + MER41B LTR ERV1 1 517 -118 1828 135 4 18 chr17 32665643 32665792 -56838761 - AluSp SINE Alu -2 311 166 3893 84 328 0 chr17 32665792 32666414 -56838139 + LTR12 LTR ERV1 1 826 0 1828 135 4 18 chr17 32666414 32666545 -56838008 - AluSp SINE Alu -147 166 35 936 81 0 0 chr17 32666545 32666669 -56837884 + MER41A LTR ERV1 431 554 0 342 0 0 0 chr17 32666828 32666866 -56837687 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1260 184 132 29 chr17 32667128 32667400 -56837153 + AluSc SINE Alu 1 300 -9 898 214 78 6 chr17 32667634 32667852 -56836701 + MLT2B1 LTR ERVL 3 217 -236 312 70 0 0 chr17 32667868 32667911 -56836642 + (TC)n Simple_repeat Simple_repeat 2 44 0 1827 227 127 20 chr17 32668560 32669097 -56835456 + L1MC4 LINE L1 6488 7081 -961 854 260 138 16 chr17 32669102 32669261 -56835292 + L1MC4 LINE L1 7413 7551 -491 2026 172 121 5 chr17 32669261 32669674 -56834879 - LOR1b LTR ERV1 0 461 1 854 260 138 16 chr17 32669674 32669826 -56834727 + L1MC4 LINE L1 7551 7762 -280 793 206 146 10 chr17 32669827 32670026 -56834527 - MLT1G LTR MaLR -3 587 362 * 1334 147 9 0 chr17 32670017 32670228 -56834325 + LOR1b LTR ERV1 211 423 -38 * 1339 198 122 23 chr17 32670226 32670599 -56833954 - MLT1G LTR MaLR -209 386 1 270 254 94 43 chr17 32670601 32670665 -56833888 + L1MC4 LINE L1 7758 7817 -225 2290 82 20 3 chr17 32670665 32670959 -56833594 - AluSq SINE Alu -10 303 5 270 254 94 43 chr17 32670959 32671032 -56833521 + L1MC4 LINE L1 7817 7902 -140 325 358 121 4 chr17 32671076 32671308 -56833245 + L1ME LINE L1 5260 5518 -644 1912 170 0 3 chr17 32671511 32671811 -56832742 + AluJo SINE Alu 1 299 -13 207 0 0 0 chr17 32671811 32671834 -56832719 + (TA)n Simple_repeat Simple_repeat 2 24 0 2237 107 0 32 chr17 32672426 32672736 -56831817 + AluSx SINE Alu 1 300 -12 282 241 0 0 chr17 32672928 32673011 -56831542 + L1ME3A LINE L1 5225 5307 -839 1099 150 0 0 chr17 32673026 32673186 -56831367 + AluSg/x SINE Alu 135 294 -18 611 252 73 34 chr17 32673214 32673507 -56831046 + L1ME3A LINE L1 5324 5625 -537 651 241 14 7 chr17 32673509 32673650 -56830903 + MLT1H1 LTR MaLR 1 142 -413 336 228 62 62 chr17 32673845 32673990 -56830563 + MLT1H1 LTR MaLR 180 324 -271 311 167 5 5 chr17 32674076 32674146 -56830407 + MLT1G LTR MaLR 526 590 0 576 282 50 19 chr17 32674146 32674453 -56830100 + L1ME3A LINE L1 5621 5948 -214 408 200 0 0 chr17 32674723 32674808 -56829745 + GA-rich Low_complexity Low_complexity 3 87 0 2219 86 0 36 chr17 32674814 32675116 -56829437 + AluSg1 SINE Alu 1 291 -18 1229 121 0 0 chr17 32675116 32675290 -56829263 + AluSc SINE Alu 132 305 -4 834 191 165 5 chr17 32675497 32675621 -56828932 + MLT1A1 LTR MaLR 3 106 -259 2205 156 47 40 chr17 32675621 32676044 -56828509 - MSTB LTR MaLR 0 426 1 834 191 165 5 chr17 32676044 32676107 -56828446 + MLT1A1 LTR MaLR 106 220 -145 481 127 14 0 chr17 32676105 32676176 -56828377 + MLT1A1 LTR MaLR 252 323 -42 * 259 338 65 7 chr17 32676987 32677141 -56827412 - MER20B DNA MER1_type -614 169 7 2529 46 0 7 chr17 32677233 32677536 -56827017 - AluY SINE Alu -10 301 1 1739 112 8 8 chr17 32678194 32678443 -56826110 + AluSx SINE Alu 64 312 0 2320 94 0 46 chr17 32678854 32679182 -56825371 - AluSq SINE Alu 0 313 1 2979 204 34 27 chr17 32679598 32680068 -56824485 - MER82 DNA MER2_type -1 652 176 2015 147 0 10 chr17 32680068 32680382 -56824171 + AluSx SINE Alu 1 311 -1 2979 204 34 27 chr17 32680382 32680532 -56824021 - MER82 DNA MER2_type -477 176 28 565 283 178 48 chr17 32680525 32680981 -56823572 + LTR67 LTR ERVL 31 545 -12 * 914 184 79 16 chr17 32681612 32681802 -56822751 - MLT1A2 LTR MaLR 0 374 173 296 62 0 42 chr17 32681805 32681853 -56822700 + (GGGAGA)n Simple_repeat Simple_repeat 3 48 0 645 144 0 66 chr17 32681953 32682134 -56822419 + (GGGAGA)n Simple_repeat Simple_repeat 1 169 0 761 170 88 6 chr17 32682153 32682312 -56822241 - MLT1A2 LTR MaLR -218 172 1 221 307 270 0 chr17 32682344 32682481 -56822072 + MIR3 SINE MIR 24 197 -11 678 179 179 6 chr17 32683020 32683176 -56821377 + MER5A DNA MER1_type 7 189 0 387 284 116 13 chr17 32683173 32683328 -56821225 + MIR3 SINE MIR 1 171 -37 * 467 168 32 32 chr17 32683707 32683802 -56820751 - MER5A DNA MER1_type -1 188 94 664 163 76 70 chr17 32683812 32683984 -56820569 + MLT1B LTR MaLR 1 173 -217 959 178 14 33 chr17 32683986 32684200 -56820353 - AluSx SINE Alu -102 210 1 206 245 57 0 chr17 32685030 32685083 -56819470 - MIR3 SINE MIR -25 183 128 320 203 0 0 chr17 32685337 32685406 -56819147 - AluJ/monomer SINE Alu 0 302 234 241 288 245 10 chr17 32685409 32685801 -56818752 + L2 LINE L2 2447 2930 -384 216 169 261 0 chr17 32686182 32686247 -56818306 - MIR SINE MIR -87 175 94 447 264 71 21 chr17 32686247 32686387 -56818166 + L1ME LINE L1 136 282 -5923 * 1938 278 49 37 chr17 32686360 32686948 -56817605 + L1ME LINE L1 1054 1658 -4738 2261 100 0 3 chr17 32686948 32687258 -56817295 + AluY SINE Alu 1 309 -2 1938 278 49 37 chr17 32687258 32687559 -56816994 + L1ME LINE L1 1658 1954 -4442 41506 65 7 4 chr17 32687640 32693767 -56810786 - L1PA5 LINE L1 -1 6153 5 1813 151 7 3 chr17 32694300 32694605 -56809948 + AluJb SINE Alu 1 306 -6 516 231 101 111 chr17 32694793 32695356 -56809197 + LTR33A LTR ERVL 1 523 0 510 258 26 16 chr17 32695406 32695557 -56808996 + MIR SINE MIR 5 154 -55 239 272 52 12 chr17 32696011 32696115 -56808438 - MIR SINE MIR -60 148 86 953 123 0 0 chr17 32696176 32696338 -56808215 + AluSc SINE Alu 144 305 0 1400 181 3 58 chr17 32696350 32696485 -56808068 + AluJo SINE Alu 1 142 -170 1656 154 7 4 chr17 32696485 32696758 -56807795 - AluSx SINE Alu -23 289 16 1400 181 3 58 chr17 32696758 32696932 -56807621 + AluJo SINE Alu 142 293 -19 186 206 0 0 chr17 32697021 32697055 -56807498 - L2 LINE L2 -18 3254 3221 275 324 57 0 chr17 32697090 32697195 -56807358 - MIR SINE MIR -114 148 38 411 318 52 57 chr17 32697501 32697693 -56806860 + L2 LINE L2 2871 3061 -211 307 316 65 32 chr17 32697809 32697964 -56806589 - MER5B DNA MER1_type -18 160 1 599 247 0 16 chr17 32698033 32698050 -56806503 + GA-rich Low_complexity Low_complexity 1 17 -1384 5587 92 24 70 chr17 32698050 32698916 -56805637 - LTR12 LTR ERV1 0 826 1 599 247 0 16 chr17 32698916 32699074 -56805479 + GA-rich Low_complexity Low_complexity 17 176 -1225 2081 102 9 19 chr17 32699074 32699389 -56805164 + AluSx SINE Alu 1 312 0 599 247 0 16 chr17 32699389 32699458 -56805095 + GA-rich Low_complexity Low_complexity 176 1401 0 461 268 78 13 chr17 32699590 32699743 -56804810 + MIR SINE MIR 32 194 -68 284 282 225 0 chr17 32699758 32699900 -56804653 - MER5A DNA MER1_type -7 182 9 1878 180 148 9 chr17 32700121 32700559 -56803994 - MLT1D LTR MaLR -6 499 1 259 331 162 0 chr17 32701723 32701859 -56802694 + MIR SINE MIR 3 160 -102 231 114 0 0 chr17 32702057 32702092 -56802461 + (TC)n Simple_repeat Simple_repeat 2 36 0 1858 170 0 3 chr17 32702111 32702417 -56802136 - AluJb SINE Alu -7 305 1 429 281 45 34 chr17 32702532 32702710 -56801843 - MIR SINE MIR -34 228 49 273 29 0 0 chr17 32703232 32703266 -56801287 + (CA)n Simple_repeat Simple_repeat 2 35 0 431 163 23 35 chr17 32703416 32703502 -56801051 + FLAM_A SINE Alu 1 85 -57 21 0 0 0 chr17 32703580 32703601 -56800952 + AT_rich Low_complexity Low_complexity 1 21 0 511 248 86 74 chr17 32703608 32703965 -56800588 + L1ME3A LINE L1 2143 2460 -3755 2287 89 0 13 chr17 32703965 32704280 -56800273 + AluY SINE Alu 1 311 0 511 248 86 74 chr17 32704280 32704348 -56800205 + L1ME3A LINE L1 2460 2526 -3689 584 275 41 32 chr17 32704353 32704691 -56799862 + L1ME3A LINE L1 4246 4586 -1629 * 1552 174 50 30 chr17 32704687 32704804 -56799749 + L1M4 LINE L1 4963 5076 -1070 1894 71 114 4 chr17 32704804 32705085 -56799468 - AluSx SINE Alu 0 312 1 1552 174 50 30 chr17 32705085 32705363 -56799190 + L1M4 LINE L1 5076 5366 -780 695 104 0 38 chr17 32705375 32705481 -56799072 + AluSc SINE Alu 35 136 -173 656 197 0 0 chr17 32705605 32705737 -56798816 + L1MA10 LINE L1 6196 6327 -7 1475 257 124 33 chr17 32705738 32706274 -56798279 + L1ME3A LINE L1 4553 5039 -1200 1598 196 33 0 chr17 32706274 32706575 -56797978 - AluJo SINE Alu 0 312 2 1475 257 124 33 chr17 32706575 32706780 -56797773 + L1ME3A LINE L1 5039 5224 -1015 1654 177 3 3 chr17 32706780 32707063 -56797490 + AluJb SINE Alu 10 292 -20 1475 257 124 33 chr17 32707063 32707673 -56796880 + L1ME3A LINE L1 5224 6037 -202 331 214 60 68 chr17 32707702 32707819 -56796734 + L1ME3A LINE L1 6003 6118 -121 352 296 54 75 chr17 32707907 32708093 -56796460 - MLT1L LTR MaLR -418 197 16 431 322 53 20 chr17 32708496 32708648 -56795905 - MIR SINE MIR -85 177 21 275 308 131 20 chr17 32709040 32709238 -56795315 - L3 LINE CR1 -109 1468 1249 2820 197 97 31 chr17 32709367 32709932 -56794621 + Zaphod DNA AcHobo 43 672 -3359 1576 120 50 173 chr17 32709932 32710086 -56794467 - MER1B DNA MER1_type -2373 337 256 2187 101 3 0 chr17 32710086 32710384 -56794169 + AluSq SINE Alu 1 299 -14 1576 120 50 173 chr17 32710384 32710611 -56793942 - MER1B DNA MER1_type -2454 256 3 2820 197 97 31 chr17 32710611 32710809 -56793744 + Zaphod DNA AcHobo 672 856 -3175 853 243 67 0 chr17 32710809 32711019 -56793534 - MER58A DNA MER1_type 0 224 1 2101 103 3 35 chr17 32711096 32711408 -56793145 - AluSx SINE Alu -10 302 1 1176 192 20 28 chr17 32711524 32711779 -56792774 + AluJo SINE Alu 36 288 -24 686 160 71 30 chr17 32711802 32711887 -56792666 + Zaphod DNA AcHobo 3596 3676 -355 1697 189 0 0 chr17 32711887 32712194 -56792359 + AluJb SINE Alu 1 307 -5 686 160 71 30 chr17 32712194 32712277 -56792276 + Zaphod DNA AcHobo 3676 3771 -260 1954 106 11 3 chr17 32712278 32712583 -56791970 - AluSx SINE Alu 0 307 1 1976 172 26 3 chr17 32712614 32712743 -56791810 - Tigger3(Golem) DNA MER2_type -879 2149 2024 1227 146 132 79 chr17 32712743 32713023 -56791530 - AluJb SINE Alu -7 295 1 1976 172 26 3 chr17 32713023 32713236 -56791317 - Tigger3(Golem) DNA MER2_type -1004 2024 2 232 172 17 52 chr17 32713236 32713294 -56791259 + MIR SINE MIR 152 207 -55 334 267 139 92 chr17 32713394 32713427 -56791126 + L1MC4a LINE L1 5883 5913 -1895 2214 97 3 0 chr17 32713427 32713725 -56790828 - AluSp SINE Alu -14 299 1 334 267 139 92 chr17 32713725 32713972 -56790581 + L1MC4a LINE L1 5913 6176 -1632 218 286 88 68 chr17 32713988 32714135 -56790418 - L3 LINE CR1 -478 1099 950 567 224 152 18 chr17 32715501 32715666 -56788887 + MIR SINE MIR 28 214 -48 509 282 81 6 chr17 32716024 32716198 -56788355 + MIR SINE MIR 35 221 -41 466 217 0 61 chr17 32716388 32716503 -56788050 - MIR SINE MIR -84 124 17 189 390 0 0 chr17 32716679 32716761 -56787792 + MIR SINE MIR 176 257 -5 435 332 58 9 chr17 32716893 32717116 -56787437 - L2 LINE L2 -1217 2097 1864 505 302 76 6 chr17 32717187 32717398 -56787155 - MIR SINE MIR -3 259 36 1781 176 0 0 chr17 32717694 32718006 -56786547 + AluJb SINE Alu 1 312 0 291 54 0 0 chr17 32718021 32718058 -56786495 + (CA)n Simple_repeat Simple_repeat 2 38 0 219 271 47 12 chr17 32718089 32718174 -56786379 - MIR SINE MIR -65 197 110 358 293 168 6 chr17 32718307 32718474 -56786079 - L2 LINE L2 0 3272 3079 260 303 37 17 chr17 32718733 32718855 -56785698 + MIR SINE MIR 26 146 -62 737 271 89 0 chr17 32719591 32719816 -56784737 - MIR SINE MIR -12 250 6 600 290 31 52 chr17 32719857 32720147 -56784406 - L3 LINE CR1 -24 1553 1270 21 0 0 0 chr17 32720365 32720386 -56784167 + AT_rich Low_complexity Low_complexity 1 21 0 306 241 26 95 chr17 32720388 32720504 -56784049 - L1ME4a LINE L1 -1 6120 6013 4445 159 18 16 chr17 32720569 32720906 -56783647 + L1MCa LINE L1 163 498 -5928 2008 99 0 7 chr17 32720906 32721211 -56783342 + AluSg SINE Alu 1 303 0 4445 159 18 16 chr17 32721211 32721664 -56782889 + L1MCa LINE L1 498 955 -5471 1687 164 3 16 chr17 32721664 32721968 -56782585 + AluJb SINE Alu 1 300 -12 242 150 0 0 chr17 32721968 32722008 -56782545 - L1MCa LINE L1 -5345 1081 1042 1001 121 13 0 chr17 32722018 32722175 -56782378 + L1MCa LINE L1 1769 1927 -4499 535 250 125 6 chr17 32722176 32722344 -56782209 - MIR3 SINE MIR -12 196 9 191 204 23 0 chr17 32722897 32722941 -56781612 + MIR SINE MIR 98 142 -66 253 239 45 0 chr17 32722952 32723019 -56781534 - L2 LINE L2 -4 3309 3240 2089 125 0 3 chr17 32723072 32723369 -56781184 + AluSx SINE Alu 1 296 -16 677 264 6 0 chr17 32723477 32723651 -56780902 + L1MEd LINE L1 31 205 -5914 926 285 63 76 chr17 32723711 32724318 -56780235 + L1MEd LINE L1 424 1022 -5097 25 65 0 0 chr17 32724356 32724402 -56780151 + AT_rich Low_complexity Low_complexity 1 46 0 1310 143 20 89 chr17 32724402 32724562 -56779991 - L1MA7 LINE L1 -3 6288 6118 1898 129 7 13 chr17 32724562 32724865 -56779688 - AluJb SINE Alu -11 301 1 1310 143 20 89 chr17 32724865 32725129 -56779424 - L1MA7 LINE L1 -173 6118 5926 1067 164 27 41 chr17 32725131 32725307 -56779246 - Tigger1 DNA MER2_type 0 2418 2243 2149 88 0 3 chr17 32725307 32725614 -56778939 - AluSq SINE Alu 0 306 1 1067 164 27 41 chr17 32725614 32725656 -56778897 - Tigger1 DNA MER2_type -175 2243 2202 656 215 0 40 chr17 32725639 32725788 -56778765 - Tigger1 DNA MER2_type -2255 163 21 * 6575 148 13 15 chr17 32725793 32727245 -56777308 - L1MA7 LINE L1 -366 5925 4481 1663 140 44 4 chr17 32727245 32727571 -56776982 - AluSq SINE Alu 0 337 1 6575 148 13 15 chr17 32727571 32727900 -56776653 - L1MA7 LINE L1 -1810 4481 4153 579 193 57 7 chr17 32727900 32728040 -56776513 + Charlie1 DNA MER1_type 803 949 -1812 921 268 24 20 chr17 32728076 32728330 -56776223 - MER69 DNA AcHobo -673 553 299 226 304 36 89 chr17 32728400 32728512 -56776041 + MLT2E LTR ERVL 69 174 -454 268 229 0 0 chr17 32728696 32728757 -56775796 + ERVL LTR ERVL 3877 3937 -1827 1794 150 17 0 chr17 32728758 32729052 -56775501 + AluSx SINE Alu 3 301 -11 757 265 62 94 chr17 32729166 32729264 -56775289 + L1ME3 LINE L1 4745 4845 -1317 1958 178 37 6 chr17 32729264 32729618 -56774935 + MLT1A1 LTR MaLR 1 365 0 757 265 62 94 chr17 32729618 32729933 -56774620 + L1ME3 LINE L1 4845 5169 -993 821 205 12 30 chr17 32729933 32730099 -56774454 + FRAM SINE Alu 4 166 0 757 265 62 94 chr17 32730099 32730894 -56773659 + L1ME3 LINE L1 5169 5952 -210 235 0 0 0 chr17 32731088 32731114 -56773439 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1291 142 21 97 chr17 32731114 32731403 -56773150 - AluJb SINE Alu -1 307 16 289 139 125 14 chr17 32731677 32731749 -56772804 + L1MEd LINE L1 1167 1246 -4873 2403 53 0 16 chr17 32731778 32732082 -56772471 + AluY SINE Alu 1 299 -12 489 246 31 8 chr17 32732095 32732225 -56772328 + MER94 DNA DNA 1 133 -1 231 305 123 13 chr17 32732846 32733000 -56771553 - L1MC/D LINE L1 -2084 5724 5554 258 194 0 0 chr17 32733034 32733096 -56771457 + A-rich Low_complexity Low_complexity 1 62 0 1207 70 0 0 chr17 32733226 32733384 -56771169 + AluY SINE Alu 153 310 -1 228 243 158 40 chr17 32733392 32733594 -56770959 + L1ME3A LINE L1 1843 2068 -4472 23 0 0 0 chr17 32733661 32733684 -56770869 + AT_rich Low_complexity Low_complexity 1 23 0 2169 110 3 0 chr17 32733988 32734288 -56770265 + AluSq SINE Alu 1 301 -12 2020 246 79 69 chr17 32734370 32734635 -56769918 + L1ME3A LINE L1 2524 2785 -3755 1940 102 49 30 chr17 32734635 32734940 -56769613 + AluSx SINE Alu 1 311 -1 2020 246 79 69 chr17 32734940 32735949 -56768604 + L1ME3A LINE L1 2785 3820 -2720 1349 129 183 38 chr17 32735949 32736212 -56768341 + AluJb SINE Alu 1 301 -11 2020 246 79 69 chr17 32736212 32736537 -56768016 + L1ME3A LINE L1 3820 4140 -2400 583 165 0 0 chr17 32736560 32736651 -56767902 + U6 snRNA snRNA 17 107 0 4375 83 40 2 chr17 32736651 32737256 -56767297 + L1MA2 LINE L1 5445 6072 -232 1075 110 13 0 chr17 32737285 32737440 -56767113 + AluSq SINE Alu 108 264 -49 1734 48 35 4 chr17 32737440 32737667 -56766886 + L1MA1 LINE L1 6069 6302 0 397 305 35 28 chr17 32737693 32737834 -56766719 + L1ME3A LINE L1 4146 4287 -2253 1536 201 121 51 chr17 32737892 32738060 -56766493 + MSTB2 LTR MaLR 15 170 -287 1621 164 30 33 chr17 32738060 32738364 -56766189 - AluJo SINE Alu -9 303 1 1536 201 121 51 chr17 32738364 32738608 -56765945 + MSTB2 LTR MaLR 170 456 -1 25 0 0 0 chr17 32738608 32738633 -56765920 + AT_rich Low_complexity Low_complexity 1 25 0 677 297 27 20 chr17 32738633 32738926 -56765627 + L1ME3A LINE L1 4348 4642 -1898 839 188 7 0 chr17 32738931 32739080 -56765473 + FRAM SINE Alu 16 165 -11 1822 147 45 0 chr17 32739114 32739400 -56765153 + AluSx SINE Alu 3 301 -11 1202 299 31 28 chr17 32739428 32740175 -56764378 + L1ME3A LINE L1 4705 5453 -1087 2060 128 7 0 chr17 32740188 32740484 -56764069 - AluSx SINE Alu -14 298 1 2170 81 0 0 chr17 32740494 32740778 -56763775 - AluY SINE Alu -7 304 21 2180 180 69 65 chr17 32740880 32741370 -56763183 + L1ME2 LINE L1 5586 6073 -91 2061 116 7 3 chr17 32741370 32741680 -56762873 + AluSq SINE Alu 1 311 -2 2180 180 69 65 chr17 32741680 32741745 -56762808 + L1ME2 LINE L1 6073 6146 -18 2425 61 0 0 chr17 32741745 32742042 -56762511 + AluY SINE Alu 1 297 -14 410 270 127 36 chr17 32742075 32742425 -56762128 + L1ME3A LINE L1 5591 5986 -579 1993 124 0 13 chr17 32742584 32742883 -56761670 + AluSg SINE Alu 1 295 -15 900 136 34 0 chr17 32742883 32743030 -56761523 + AluSg/x SINE Alu 134 285 -27 225 0 0 0 chr17 32743030 32743055 -56761498 + (CA)n Simple_repeat Simple_repeat 2 26 0 414 211 135 58 chr17 32743091 32743299 -56761254 + L1ME3A LINE L1 6139 6362 -196 313 333 22 44 chr17 32743342 32743525 -56761028 + L1ME3A LINE L1 6359 6537 -27 2005 117 7 0 chr17 32743685 32743994 -56760559 + AluSq SINE Alu 1 311 0 220 300 86 82 chr17 32744329 32744549 -56760004 - L2 LINE L2 -224 3048 2828 1575 193 42 47 chr17 32745712 32746096 -56758457 - MLT1B LTR MaLR -8 382 1 252 0 0 0 chr17 32746199 32746227 -56758326 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 2288 86 0 0 chr17 32746489 32746780 -56757773 - AluSg SINE Alu -19 291 1 732 157 92 160 chr17 32747833 32748127 -56756426 + LTR12 LTR ERV1 1 274 -440 290 259 12 0 chr17 32748139 32748220 -56756333 + LTR30 LTR ERV1 539 620 -102 704 197 25 0 chr17 32748225 32748347 -56756206 + LTR12 LTR ERV1 360 484 -230 506 253 40 46 chr17 32748838 32749012 -56755541 + MIR SINE MIR 28 200 -62 616 225 28 62 chr17 32749047 32749225 -56755328 - MIR SINE MIR -43 219 48 2097 110 17 0 chr17 32749226 32749527 -56755026 - AluSx SINE Alu -6 306 1 2039 102 10 7 chr17 32750288 32750581 -56753972 + AluSc SINE Alu 1 294 -15 996 138 0 0 chr17 32750581 32750726 -56753827 + AluSg/x SINE Alu 135 279 -31 271 18 89 0 chr17 32750728 32750784 -56753769 + (TA)n Simple_repeat Simple_repeat 2 62 0 538 290 19 7 chr17 32750823 32750978 -56753575 + MIR SINE MIR 105 261 -1 282 272 116 27 chr17 32751077 32751224 -56753329 - MIR3 SINE MIR -8 200 41 214 203 156 31 chr17 32751716 32751780 -56752773 - L2 LINE L2 -65 3207 3136 1904 138 14 0 chr17 32752213 32752504 -56752049 + AluSx SINE Alu 1 295 -17 639 275 134 40 chr17 32752753 32753127 -56751426 - MLT1J LTR MaLR -3 508 100 266 271 59 12 chr17 32753152 32753237 -56751316 - MER5A DNA MER1_type 0 189 101 2233 87 0 3 chr17 32753302 32753600 -56750953 + AluSq SINE Alu 7 303 -10 205 360 12 0 chr17 32754037 32754123 -56750430 - MIR SINE MIR -174 88 2 2396 103 244 187 chr17 32754398 32755314 -56749239 + LTR12 LTR ERV1 57 714 0 316 331 86 29 chr17 32755909 32756084 -56748469 - MER5A DNA MER1_type 0 189 5 183 381 58 13 chr17 32756351 32756506 -56748047 + MIR SINE MIR 14 175 -87 241 100 40 0 chr17 32756724 32756774 -56747779 + (TG)n Simple_repeat Simple_repeat 2 53 0 345 263 70 105 chr17 32756874 32757159 -56747394 - L1ME4a LINE L1 -4 6117 5843 2147 109 0 6 chr17 32757292 32757603 -56746950 - AluSx SINE Alu -2 310 2 630 293 79 36 chr17 32757757 32758198 -56746355 + L1ME4a LINE L1 5414 5873 -248 1608 147 23 36 chr17 32758751 32759057 -56745496 + AluJo SINE Alu 11 312 0 236 130 22 0 chr17 32759059 32759105 -56745448 + GA-rich Low_complexity Low_complexity 1 47 0 258 328 45 52 chr17 32759112 32759179 -56745374 + L1MEd LINE L1 568 634 -5485 2015 99 46 3 chr17 32759179 32759463 -56745090 + AluSx SINE Alu 1 296 -16 258 328 45 52 chr17 32759463 32759663 -56744890 + L1MEd LINE L1 634 833 -5286 424 269 185 36 chr17 32760487 32760795 -56743758 + L1ME4a LINE L1 5731 6084 -37 186 283 196 0 chr17 32760862 32760954 -56743599 + MIR SINE MIR 3 112 -150 660 216 32 63 chr17 32760965 32761155 -56743398 - L2 LINE L2 -2 3311 3128 331 259 24 0 chr17 32761162 32761247 -56743306 + MIR SINE MIR 162 248 -14 201 278 79 29 chr17 32762213 32762366 -56742187 - MIR SINE MIR -13 249 51 557 208 0 75 chr17 32762420 32762540 -56742013 - MER81 DNA DNA -1 113 3 1866 131 31 0 chr17 32762804 32763095 -56741458 + AluSq SINE Alu 1 300 -13 389 232 176 8 chr17 32763162 32763287 -56741266 + MIR3 SINE MIR 21 166 -42 461 225 33 3 chr17 32763316 32763442 -56741111 - MIR3 SINE MIR -53 155 19 410 235 61 35 chr17 32763887 32764002 -56740551 - MIR SINE MIR -139 123 6 199 200 0 80 chr17 32764165 32764215 -56740338 - L2 LINE L2 0 3272 3227 206 250 141 0 chr17 32764288 32764352 -56740201 - L2 LINE L2 -213 3059 2987 371 279 27 0 chr17 32764658 32764769 -56739784 - MIR SINE MIR -100 162 49 288 0 0 0 chr17 32764849 32764881 -56739672 + (A)n Simple_repeat Simple_repeat 1 32 0 407 279 86 79 chr17 32765333 32765360 -56739193 - MLT1K LTR MaLR -263 325 300 1919 108 18 4 chr17 32765360 32765665 -56738888 + AluSx SINE Alu 1 309 0 407 279 86 79 chr17 32765665 32765916 -56738637 - MLT1K LTR MaLR -288 300 44 2146 123 0 0 chr17 32766239 32766547 -56738006 + AluY SINE Alu 2 309 -2 2119 104 10 0 chr17 32767876 32768165 -56736388 + AluSg SINE Alu 1 292 -18 1192 316 23 25 chr17 32768237 32768722 -56735831 + MLT1K LTR MaLR 19 502 -86 409 291 240 0 chr17 32769649 32769828 -56734725 + MLT1L LTR MaLR 317 538 -77 1570 189 37 0 chr17 32769828 32770004 -56734549 - AluJo SINE Alu -4 308 115 216 0 0 0 chr17 32770004 32770028 -56734525 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1570 189 37 0 chr17 32770028 32770148 -56734405 - AluJo SINE Alu -197 115 1 514 227 42 0 chr17 32770182 32770301 -56734252 + MER5A DNA MER1_type 1 124 -65 544 178 0 0 chr17 32770303 32770404 -56734149 + AluSg/x SINE Alu 211 311 -1 205 188 71 94 chr17 32770404 32770489 -56734064 - MER5A DNA MER1_type -105 84 2 1333 116 0 0 chr17 32770922 32771112 -56733441 - AluSg/x SINE Alu -11 301 112 1318 174 0 0 chr17 32771253 32771483 -56733070 - AluSq SINE Alu -13 300 71 1451 181 3 7 chr17 32771603 32771890 -56732663 - AluJo SINE Alu -26 286 1 2408 51 0 13 chr17 32771973 32772287 -56732266 - AluY SINE Alu 0 311 2 216 0 0 0 chr17 32773177 32773201 -56731352 + (A)n Simple_repeat Simple_repeat 1 24 0 233 129 0 0 chr17 32773219 32773250 -56731303 + Alu SINE Alu 1 31 -270 1931 146 3 10 chr17 32773252 32773386 -56731167 + AluSx SINE Alu 1 134 -178 1915 135 10 7 chr17 32773386 32773690 -56730863 + AluSq SINE Alu 1 305 -8 1931 146 3 10 chr17 32773690 32773864 -56730689 + AluSx SINE Alu 134 307 -5 826 178 0 7 chr17 32773873 32774019 -56730534 + AluJb SINE Alu 160 304 -8 1622 151 42 0 chr17 32774022 32774306 -56730247 + AluSx SINE Alu 1 296 -16 227 152 0 0 chr17 32774309 32774355 -56730198 - L1MC4 LINE L1 -1339 6703 6658 23 33 0 0 chr17 32774361 32774391 -56730162 + AT_rich Low_complexity Low_complexity 1 30 0 888 129 7 7 chr17 32774843 32774998 -56729555 - AluY SINE Alu -21 290 136 2232 93 0 0 chr17 32775145 32775436 -56729117 + AluSc SINE Alu 1 291 -18 279 225 14 0 chr17 32775572 32775643 -56728910 + L1PB4 LINE L1 6068 6139 -17 2004 115 7 3 chr17 32775646 32775942 -56728611 - AluSg SINE Alu -13 297 1 236 190 0 0 chr17 32775951 32776009 -56728544 - AluSp/q SINE Alu -1 302 245 * 315 116 0 0 chr17 32776002 32776084 -56728469 + Alu SINE Alu 241 322 0 2332 52 3 16 chr17 32776132 32776437 -56728116 + AluY SINE Alu 1 301 -10 2018 96 7 3 chr17 32776576 32776858 -56727695 + AluSx SINE Alu 1 283 -29 893 200 12 0 chr17 32777017 32777187 -56727366 - L1MC3 LINE L1 -1060 6725 6554 459 184 11 0 chr17 32777204 32777291 -56727262 - FLAM_A SINE Alu -8 134 47 207 88 0 0 chr17 32777465 32777499 -56727054 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 1856 129 7 17 chr17 32777503 32777790 -56726763 - AluSx SINE Alu -28 284 1 494 186 137 10 chr17 32777900 32778002 -56726551 + FLAM_C SINE Alu 3 117 -16 2414 77 0 0 chr17 32778009 32778320 -56726233 - AluY SINE Alu 0 311 1 2152 95 0 3 chr17 32778321 32778616 -56725937 - AluY SINE Alu -17 294 1 2201 89 10 0 chr17 32778617 32778908 -56725645 - AluSp SINE Alu -19 294 1 824 137 8 0 chr17 32779077 32779194 -56725359 - FLAM_C SINE Alu -15 118 1 511 239 99 42 chr17 32779260 32779594 -56724959 - L1MDa LINE L1 -3965 2575 2223 237 65 0 0 chr17 32779594 32779625 -56724928 + (TG)n Simple_repeat Simple_repeat 2 32 0 381 275 23 0 chr17 32779642 32779773 -56724780 + (TA)n Simple_repeat Simple_repeat 2 135 0 249 284 220 39 chr17 32779782 32780014 -56724539 + L2 LINE L2 2024 2297 -1017 959 202 90 62 chr17 32780234 32780590 -56723963 + L1MDa LINE L1 1836 2201 -4339 246 32 0 0 chr17 32780591 32780622 -56723931 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 408 233 35 35 chr17 32780623 32780739 -56723814 + MIR SINE MIR 131 246 -16 2149 114 14 0 chr17 32780739 32781029 -56723524 + AluSx SINE Alu 1 294 -18 833 148 15 0 chr17 32781212 32781349 -56723204 - FAM SINE Alu -13 172 36 417 206 122 38 chr17 32781351 32781482 -56723071 - HAL1 LINE L1 -867 1640 1499 1217 126 0 0 chr17 32781519 32781693 -56722860 - AluSg/x SINE Alu -5 307 134 465 218 59 143 chr17 32781704 32781789 -56722764 - HAL1 LINE L1 -1026 1481 1390 2281 121 0 0 chr17 32781789 32782102 -56722451 + AluSq SINE Alu 1 313 0 465 218 59 143 chr17 32782102 32782442 -56722111 - HAL1 LINE L1 -1117 1390 1092 2294 115 0 6 chr17 32782472 32782786 -56721767 + AluSp SINE Alu 1 312 -1 1926 198 27 47 chr17 32782786 32783044 -56721509 + MER63B DNA MER1_type 1 248 -814 2266 90 3 3 chr17 32783044 32783332 -56721221 + AluSq SINE Alu 1 288 -25 1926 198 27 47 chr17 32783332 32783518 -56721035 + MER63B DNA MER1_type 248 436 0 2417 72 0 0 chr17 32783562 32783853 -56720700 + AluSg SINE Alu 1 291 -19 2347 107 0 0 chr17 32784013 32784322 -56720231 - AluSx SINE Alu -3 309 1 2435 97 0 0 chr17 32784447 32784756 -56719797 - AluSg SINE Alu -1 309 1 2194 105 3 0 chr17 32784956 32785265 -56719288 - AluSp SINE Alu 0 310 1 687 122 0 0 chr17 32785415 32785513 -56719040 - AluSc SINE Alu -14 295 198 2008 73 0 8 chr17 32785586 32785833 -56718720 + AluY SINE Alu 52 296 -15 572 209 67 0 chr17 32786266 32786371 -56718182 - AluJo/FRAM SINE Alu -15 297 186 2137 125 14 0 chr17 32786371 32786667 -56717886 - AluSx SINE Alu -12 300 1 21 0 0 0 chr17 32786739 32786760 -56717793 + AT_rich Low_complexity Low_complexity 1 21 0 2630 54 0 0 chr17 32786914 32787211 -56717342 + AluSc SINE Alu 1 297 -12 2074 118 17 3 chr17 32787251 32787547 -56717006 + AluSc SINE Alu 1 300 -9 2414 76 0 3 chr17 32787547 32787848 -56716705 + AluY SINE Alu 1 300 -11 2407 71 3 3 chr17 32787868 32788164 -56716389 + AluY SINE Alu 1 296 -15 1606 101 0 0 chr17 32788323 32788521 -56716032 + AluSg SINE Alu 1 198 -112 1206 120 0 0 chr17 32788521 32788679 -56715874 + AluSg/x SINE Alu 140 297 -15 2125 138 0 0 chr17 32788863 32789168 -56715385 + AluSx SINE Alu 1 305 -7 256 316 35 26 chr17 32789698 32789812 -56714741 - MIR SINE MIR -138 124 10 2106 96 0 58 chr17 32790125 32790266 -56714287 + AluY SINE Alu 1 116 -195 2355 79 0 13 chr17 32790266 32790571 -56713982 + AluY SINE Alu 1 301 -10 2106 96 0 58 chr17 32790571 32790742 -56713811 + AluY SINE Alu 116 295 -16 2447 54 3 3 chr17 32790871 32791166 -56713387 - AluY SINE Alu -15 296 2 2453 57 20 0 chr17 32791567 32791863 -56712690 - AluY SINE Alu -9 302 1 2176 124 3 0 chr17 32791863 32792161 -56712392 - AluSx SINE Alu -13 299 1 1747 154 31 11 chr17 32792161 32792447 -56712106 - AluJo SINE Alu -20 292 1 2076 138 0 0 chr17 32792646 32792950 -56711603 - AluSx SINE Alu -8 304 1 2036 124 7 23 chr17 32793199 32793498 -56711055 - AluSx SINE Alu -18 294 1 1610 211 0 0 chr17 32793498 32793795 -56710758 - AluJo SINE Alu -14 298 1 2310 100 0 0 chr17 32793799 32794099 -56710454 - AluSc SINE Alu -9 300 1 2198 99 0 14 chr17 32794136 32794448 -56710105 - AluSg SINE Alu 0 310 1 383 276 52 9 chr17 32794571 32794687 -56709866 - L2 LINE L2 -18 3254 3134 452 234 0 19 chr17 32795065 32795172 -56709381 - FRAM SINE Alu -6 170 66 900 209 16 6 chr17 32795183 32795365 -56709188 - AluJo SINE Alu -7 305 122 1303 218 3 43 chr17 32795377 32795552 -56709001 - AluJo SINE Alu -21 291 131 2074 114 0 7 chr17 32795552 32795841 -56708712 + AluSg SINE Alu 1 287 -23 1303 218 3 43 chr17 32795841 32795968 -56708585 - AluJo SINE Alu -181 131 1 2372 65 3 7 chr17 32796004 32796298 -56708255 - AluY SINE Alu -18 293 1 1777 106 83 4 chr17 32796308 32796573 -56707980 - AluSc SINE Alu -23 286 1 183 80 0 0 chr17 32796980 32797005 -56707548 + (CGG)n Simple_repeat Simple_repeat 1 25 0 190 250 0 0 chr17 32797703 32797751 -56706802 - MIR SINE MIR -118 144 97 795 161 0 0 chr17 32798941 32799071 -56705482 + FLAM_A SINE Alu 4 133 0 2245 90 7 13 chr17 32799178 32799479 -56705074 - AluSp SINE Alu -14 299 1 2202 121 10 0 chr17 32800384 32800682 -56703871 + AluSx SINE Alu 1 301 -11 849 93 54 0 chr17 32800750 32800879 -56703674 - AluY SINE Alu 0 311 176 2202 122 3 0 chr17 32800906 32801210 -56703343 - AluSq SINE Alu -8 305 1 2121 116 0 0 chr17 32801210 32801502 -56703051 - AluY SINE Alu -19 292 1 2230 94 10 3 chr17 32801507 32801804 -56702749 - AluSq SINE Alu -14 299 1 2186 127 0 3 chr17 32801975 32802289 -56702264 - AluSq SINE Alu 0 313 1 1582 139 24 98 chr17 32802896 32803306 -56701247 - MER58D DNA MER1_type -6 380 1 2274 100 10 0 chr17 32803359 32803648 -56700905 - AluSg SINE Alu -18 292 1 22 0 0 0 chr17 32803720 32803742 -56700811 + AT_rich Low_complexity Low_complexity 1 22 0 2290 104 3 0 chr17 32803771 32804080 -56700473 - AluSq SINE Alu -3 310 1 1814 171 0 13 chr17 32804086 32804385 -56700168 - AluJb SINE Alu -17 295 1 797 187 0 0 chr17 32804410 32804544 -56700009 - LTR26B LTR ERV1 0 531 398 2129 128 7 0 chr17 32804549 32804845 -56699708 + AluSx SINE Alu 5 302 -10 22 35 0 0 chr17 32804845 32804874 -56699679 + AT_rich Low_complexity Low_complexity 1 29 0 1162 118 56 130 chr17 32804874 32805144 -56699409 - LTR26E LTR ERV1 -123 499 250 2402 97 7 0 chr17 32805144 32805454 -56699099 + AluSx SINE Alu 1 312 0 365 287 112 7 chr17 32806839 32806982 -56697571 - MER5A DNA MER1_type 0 189 32 234 271 215 0 chr17 32807022 32807129 -56697424 - MER5A DNA MER1_type -6 183 54 1655 168 44 0 chr17 32807790 32808087 -56696466 + AluJo SINE Alu 1 310 -2 1649 111 157 0 chr17 32808353 32808615 -56695938 + AluSp SINE Alu 1 303 0 1440 151 68 127 chr17 32809088 32809189 -56695364 + MER7A DNA MER2_type 1 106 -2932 2054 145 0 0 chr17 32809189 32809492 -56695061 - AluSx SINE Alu -7 305 3 1440 151 68 127 chr17 32809492 32809760 -56694793 + MER7A DNA MER2_type 106 346 0 22 35 0 0 chr17 32809952 32809981 -56694572 + AT_rich Low_complexity Low_complexity 1 29 0 2040 116 27 0 chr17 32810119 32810411 -56694142 - AluSq SINE Alu -13 300 1 198 0 0 0 chr17 32811104 32811126 -56693427 + (CACCC)n Simple_repeat Simple_repeat 3 24 0 2435 86 0 3 chr17 32813384 32813686 -56690867 - AluSp SINE Alu -12 301 1 798 213 102 0 chr17 32813743 32813968 -56690585 + MIR SINE MIR 13 260 -2 194 91 30 0 chr17 32814332 32814365 -56690188 + T-rich Low_complexity Low_complexity 5 38 0 1299 136 0 0 chr17 32815753 32815930 -56688623 - AluSq SINE Alu -136 177 1 271 282 94 54 chr17 32815961 32816110 -56688443 + L1ME2 LINE L1 5961 6115 -49 618 193 18 0 chr17 32816110 32816224 -56688329 + FLAM_C SINE Alu 1 116 -17 261 0 0 0 chr17 32816226 32816255 -56688298 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 570 228 0 0 chr17 32816517 32816767 -56687786 + (TG)n Simple_repeat Simple_repeat 1 250 0 249 305 0 48 chr17 32817039 32817144 -56687409 + MIR3 SINE MIR 106 205 -3 736 225 84 11 chr17 32817326 32817504 -56687049 + MER58C DNA MER1_type 15 205 -10 2201 98 11 0 chr17 32818161 32818483 -56686070 - AluY SINE Alu 0 325 1 522 258 23 0 chr17 32818991 32819119 -56685434 - MER5A DNA MER1_type -22 167 37 1079 203 33 0 chr17 32820108 32820320 -56684233 + MER20 DNA MER1_type 1 219 0 986 125 13 13 chr17 32820910 32821062 -56683491 + AluSx SINE Alu 2 153 -159 1701 111 58 0 chr17 32821184 32821427 -56683126 + AluSq SINE Alu 1 257 -56 676 85 0 21 chr17 32821432 32821526 -56683027 - AluS SINE Alu -219 93 2 2114 112 0 0 chr17 32822067 32822344 -56682209 + AluSx SINE Alu 1 277 -35 820 129 9 0 chr17 32822347 32822463 -56682090 - AluSq/x SINE Alu -195 117 1 426 190 25 16 chr17 32822485 32822606 -56681947 + GA-rich Low_complexity Low_complexity 3 124 0 743 191 7 0 chr17 32822664 32822805 -56681748 + MIR SINE MIR 49 190 -72 384 307 80 7 chr17 32823059 32823196 -56681357 - L2 LINE L2 0 3272 3126 2196 115 0 7 chr17 32823405 32823710 -56680843 + AluSx SINE Alu 1 303 -9 200 205 26 51 chr17 32823837 32823915 -56680638 + T-rich Low_complexity Low_complexity 2 77 0 311 234 55 28 chr17 32824885 32824900 -56679653 - L1MA10 LINE L1 0 6334 6320 2180 162 20 53 chr17 32824900 32825191 -56679362 - L1ME1 LINE L1 -5 6161 5862 1983 136 35 0 chr17 32825191 32825478 -56679075 - AluSx SINE Alu -15 297 1 2180 162 20 53 chr17 32825478 32825538 -56679015 - L1ME1 LINE L1 -304 5862 5802 949 209 169 33 chr17 32825538 32825840 -56678713 - MER2 DNA MER2_type 0 344 2 2180 162 20 53 chr17 32825840 32825943 -56678610 - L1ME1 LINE L1 -364 5802 5721 1745 97 4 0 chr17 32826048 32826274 -56678279 - AluSp SINE Alu -86 227 1 348 254 0 0 chr17 32826526 32826593 -56677960 + AluJo SINE Alu 1 67 -235 1215 173 31 9 chr17 32826705 32826931 -56677622 + AluJo SINE Alu 75 305 -7 2171 126 7 3 chr17 32828098 32828408 -56676145 + AluSq SINE Alu 1 311 -2 204 336 107 33 chr17 32829000 32829122 -56675431 - L2 LINE L2 -5 3267 3137 419 284 0 17 chr17 32829625 32829741 -56674812 - L3 LINE CR1 -20 1557 1444 22 35 0 0 chr17 32830520 32830549 -56674004 + AT_rich Low_complexity Low_complexity 1 29 0 755 153 153 13 chr17 32831358 32831508 -56673045 - AluSq SINE Alu -6 307 137 2175 131 7 0 chr17 32831526 32831832 -56672721 - AluSx SINE Alu -4 308 1 215 268 143 36 chr17 32833380 32833492 -56671061 + MIR SINE MIR 8 132 -76 237 306 0 28 chr17 32833498 32833570 -56670983 + MIR SINE MIR 2 71 -191 2131 119 10 3 chr17 32833583 32833878 -56670675 - AluSx SINE Alu -14 298 2 218 204 0 0 chr17 32834384 32834433 -56670120 + T-rich Low_complexity Low_complexity 1 49 0 395 188 0 0 chr17 32835129 32835193 -56669360 - MER2 DNA MER2_type 0 345 282 * 793 264 6 6 chr17 32835168 32835346 -56669207 - MER8 DNA MER2_type -60 179 2 3664 170 83 38 chr17 32835556 32836367 -56668186 + L1MC3 LINE L1 6939 7785 0 1771 189 48 3 chr17 32836587 32836920 -56667633 + MER7A DNA MER2_type 1 346 0 2332 83 3 13 chr17 32836945 32837257 -56667296 + AluY SINE Alu 1 309 -2 2315 95 0 10 chr17 32837887 32838191 -56666362 - AluSp SINE Alu -12 301 1 785 218 102 0 chr17 32838248 32838473 -56666080 + MIR SINE MIR 13 260 -2 210 118 0 0 chr17 32838837 32838871 -56665682 + (TTTTA)n Simple_repeat Simple_repeat 5 38 0 1873 178 3 0 chr17 32839787 32840096 -56664457 - AluJb SINE Alu -2 310 1 415 277 225 54 chr17 32840283 32840839 -56663714 - L1MC4a LINE L1 -1874 5934 5284 1330 150 0 10 chr17 32840986 32841186 -56663367 + AluSq SINE Alu 2 199 -114 2042 145 0 0 chr17 32841186 32841483 -56663070 - AluSq SINE Alu -16 297 1 292 227 56 82 chr17 32841514 32841663 -56662890 + L1ME3A LINE L1 5961 6115 -47 654 175 18 0 chr17 32841663 32841777 -56662776 + FLAM_C SINE Alu 1 116 -17 261 0 0 0 chr17 32841779 32841808 -56662745 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 693 199 0 0 chr17 32842065 32842298 -56662255 + (TG)n Simple_repeat Simple_repeat 1 233 0 248 303 0 15 chr17 32842645 32842711 -56661842 + L3 LINE CR1 1512 1576 -1 571 241 97 7 chr17 32842895 32843040 -56661513 + MER58C DNA MER1_type 15 172 -43 744 82 0 0 chr17 32843188 32843285 -56661268 + AluSg/x SINE Alu 208 304 -5 337 253 0 23 chr17 32843286 32843373 -56661180 + GA-rich Low_complexity Low_complexity 1 85 0 372 183 56 0 chr17 32843385 32843456 -56661097 + MER58B DNA MER1_type 264 338 -3 953 207 62 0 chr17 32843479 32843687 -56660866 + MER58A DNA MER1_type 4 224 0 239 286 29 9 chr17 32844070 32844175 -56660378 + L1ME4a LINE L1 6006 6112 -9 502 210 172 6 chr17 32844414 32844571 -56659982 + MER5A DNA MER1_type 4 186 -3 2183 116 7 0 chr17 32844711 32845003 -56659550 + AluSx SINE Alu 1 294 -18 249 57 0 0 chr17 32845003 32845038 -56659515 + (CA)n Simple_repeat Simple_repeat 2 36 0 1651 170 0 44 chr17 32845344 32845638 -56658915 + AluJo SINE Alu 1 281 -31 320 270 126 0 chr17 32845845 32845956 -56658597 - MIR SINE MIR -78 184 60 1560 163 50 0 chr17 32846260 32846537 -56658016 + L1MB3 LINE L1 5872 6162 -21 1677 139 82 11 chr17 32846544 32846811 -56657742 - AluJo SINE Alu -26 286 1 304 97 0 48 chr17 32846815 32846877 -56657676 + L1MB4 LINE L1 6116 6174 -6 394 258 223 6 chr17 32846949 32847128 -56657425 - MIR SINE MIR -10 252 37 280 227 142 39 chr17 32847560 32847695 -56656858 + MIR SINE MIR 10 154 -59 868 160 91 5 chr17 32847721 32847908 -56656645 + MIR SINE MIR 28 230 -32 411 145 0 0 chr17 32847935 32848004 -56656549 + (TA)n Simple_repeat Simple_repeat 2 70 0 237 256 73 0 chr17 32848511 32848593 -56655960 - MIR SINE MIR -110 152 65 1925 142 25 4 chr17 32848620 32848901 -56655652 + AluSx SINE Alu 1 287 -25 289 316 1 0 chr17 32848985 32849082 -56655471 + MIR SINE MIR 62 145 -63 266 233 346 15 chr17 32849118 32849251 -56655302 + MER69A DNA AcHobo 1 177 0 1979 163 0 0 chr17 32849329 32849623 -56654930 + AluJb SINE Alu 1 294 -18 480 239 0 52 chr17 32849690 32849824 -56654729 + L2 LINE L2 3172 3298 -15 258 250 138 0 chr17 32849827 32849943 -56654610 - MIR3 SINE MIR -35 173 42 2323 110 3 3 chr17 32850042 32850352 -56654201 + AluSx SINE Alu 1 310 -2 2082 155 0 0 chr17 32850361 32850670 -56653883 + AluJb SINE Alu 1 309 -3 2108 133 0 20 chr17 32850670 32850971 -56653582 + AluSx SINE Alu 1 295 -17 734 214 21 16 chr17 32851008 32851195 -56653358 + MER53 DNA DNA 2 189 0 408 230 68 68 chr17 32851219 32851281 -56653272 + MIR SINE MIR 52 113 -149 2371 143 25 3 chr17 32851281 32851638 -56652915 + MLT1A1 LTR MaLR 1 365 0 408 230 68 68 chr17 32851638 32851723 -56652830 + MIR SINE MIR 112 199 -63 270 212 88 77 chr17 32851919 32851957 -56652596 - MER20B DNA MER1_type -6 777 741 1829 157 3 32 chr17 32851957 32852269 -56652284 - AluSx SINE Alu -6 306 4 270 212 88 77 chr17 32852269 32852400 -56652153 - MER20B DNA MER1_type -42 741 606 370 149 81 0 chr17 32852497 32852571 -56651982 + MER116 DNA Mariner 1 80 0 860 241 61 110 chr17 32852662 32853190 -56651363 - MER20B DNA MER1_type -279 504 3 181 308 0 0 chr17 32853199 32853238 -56651315 - L3 LINE CR1 -109 1468 1430 261 0 0 0 chr17 32853567 32853596 -56650957 + (TG)n Simple_repeat Simple_repeat 1 29 0 497 278 162 32 chr17 32853618 32853834 -56650719 + MIR SINE MIR 13 256 -6 978 173 46 115 chr17 32854789 32855112 -56649441 - AluJo SINE Alu 0 302 2 2139 126 3 0 chr17 32855460 32855753 -56648800 + AluSg SINE Alu 1 294 -16 1727 148 7 38 chr17 32855935 32856273 -56648280 + AluJb SINE Alu 2 330 0 508 130 0 0 chr17 32856476 32856553 -56648000 - AluSx SINE Alu -6 305 229 6590 72 5 2 chr17 32856553 32857377 -56647176 + LTR12 LTR ERV1 1 826 0 62657 88 8 16 chr17 32857377 32865849 -56638704 + HERV9 LTR ERV1 1 8399 0 5063 52 0 133 chr17 32865849 32866643 -56637910 + LTR12 LTR ERV1 1 688 0 1850 99 0 0 chr17 32866643 32866876 -56637677 - AluSx SINE Alu -79 233 1 239 237 93 25 chr17 32867137 32867255 -56637298 + L1ME4a LINE L1 5923 6048 -73 2178 131 0 0 chr17 32867257 32867554 -56636999 - AluSx SINE Alu -15 297 1 876 254 126 47 chr17 32868084 32868261 -56636292 + L1ME4a LINE L1 5388 5550 -571 2197 107 7 0 chr17 32868261 32868552 -56636001 + AluSx SINE Alu 1 293 -19 876 254 126 47 chr17 32868552 32868986 -56635567 + L1ME4a LINE L1 5550 6050 -71 313 230 75 31 chr17 32868982 32868998 -56635555 - L1MD3 LINE L1 -1 8040 8026 * 2069 122 4 0 chr17 32868998 32869303 -56635250 + AluSg SINE Alu 1 306 0 313 230 75 31 chr17 32869303 32869850 -56634703 - L1MD3 LINE L1 -15 8026 7504 249 83 0 0 chr17 32869850 32869886 -56634667 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 313 230 75 31 chr17 32869886 32870553 -56634000 - L1MD3 LINE L1 -537 7504 6765 246 147 0 0 chr17 32870556 32870590 -56633963 + Alu SINE Alu 1 34 -267 544 206 135 0 chr17 32871395 32871521 -56633032 + MLT2B1 LTR ERVL 1 143 -377 441 68 123 0 chr17 32871650 32871723 -56632830 + L1MB4 LINE L1 6095 6176 -4 1861 139 3 21 chr17 32871993 32872311 -56632242 + AluJb SINE Alu 1 313 0 2162 118 20 0 chr17 32872361 32872666 -56631887 + AluSx SINE Alu 2 312 0 276 154 0 0 chr17 32872666 32872718 -56631835 + GA-rich Low_complexity Low_complexity 1 52 0 582 232 28 50 chr17 32872720 32872901 -56631652 + MER104 DNA MER2_type 1 177 -3 265 103 0 0 chr17 32873608 32873647 -56630906 - MER53 DNA DNA -149 40 2 1978 180 100 27 chr17 32873885 32874334 -56630219 + MLT1D LTR MaLR 1 482 -23 583 224 82 0 chr17 32874334 32874468 -56630085 + MER45A DNA AcHobo 32 176 -2 314 333 51 17 chr17 32875239 32875356 -56629197 + MLT2E LTR ERVL 39 159 -469 573 161 0 0 chr17 32875446 32875533 -56629020 + L1PA4 LINE L1 10 96 -6365 * 38112 53 6 2 chr17 32875500 32881055 -56623498 + L1PA4 LINE L1 893 6467 -3 32 0 0 0 chr17 32881068 32881100 -56623453 + AT_rich Low_complexity Low_complexity 1 32 0 477 0 0 0 chr17 32881759 32881812 -56622741 + (ATG)n Simple_repeat Simple_repeat 2 54 0 665 271 104 14 chr17 32881812 32882033 -56622520 - MIR SINE MIR -3 259 19 319 216 52 164 chr17 32882043 32882256 -56622297 + MIR SINE MIR 52 240 -22 234 162 0 0 chr17 32882544 32882581 -56621972 + MER91 DNA MER1_type 1 37 -153 189 340 0 0 chr17 32882711 32882758 -56621795 + L2 LINE L2 3267 3313 0 313 206 134 10 chr17 32883557 32883654 -56620899 + MIR SINE MIR 84 192 -70 1632 160 24 3 chr17 32883790 32884105 -56620448 + AluSx SINE Alu 1 312 0 815 128 143 0 chr17 32884105 32884261 -56620292 + AluSg/x SINE Alu 134 308 0 232 167 67 25 chr17 32885063 32885163 -56619390 + L1MC5 LINE L1 7585 7692 -269 1502 195 13 10 chr17 32885163 32885470 -56619083 - AluJo SINE Alu -4 308 1 232 167 67 25 chr17 32885470 32885489 -56619064 + L1MC5 LINE L1 7692 7709 -252 2005 137 3 3 chr17 32885874 32886181 -56618372 - AluSx SINE Alu -5 307 1 870 250 31 25 chr17 32886187 32886509 -56618044 + L1MEc LINE L1 5 394 -6002 546 291 183 27 chr17 32886517 32887144 -56617409 + L2 LINE L2 2538 3264 -8 180 0 0 0 chr17 32887308 32887328 -56617225 + (TG)n Simple_repeat Simple_repeat 1 20 0 704 188 100 6 chr17 32887366 32887526 -56617027 - MER5B DNA MER1_type -3 175 1 262 227 76 0 chr17 32887547 32887613 -56616940 + L2 LINE L2 2980 3050 -222 261 308 15 0 chr17 32887703 32887768 -56616785 + L2 LINE L2 3247 3312 -1 4202 13 2 0 chr17 32888214 32888687 -56615866 + L1PA2 LINE L1 5682 6155 0 216 0 0 0 chr17 32888699 32888723 -56615830 + (A)n Simple_repeat Simple_repeat 1 24 0 505 203 16 128 chr17 32888825 32889012 -56615541 - MER5B DNA MER1_type -12 166 1 285 284 336 8 chr17 32889103 32889237 -56615316 + MER5B DNA MER1_type 1 178 0 914 179 0 0 chr17 32889340 32889491 -56615062 - FRAM SINE Alu -16 160 10 1743 181 0 10 chr17 32889528 32889837 -56614716 - AluJb SINE Alu -5 307 2 2254 94 0 7 chr17 32889846 32890153 -56614400 - AluSp SINE Alu -8 305 1 216 322 56 35 chr17 32890205 32890348 -56614205 - MER5A DNA MER1_type 0 189 44 * 287 292 67 33 chr17 32890230 32890350 -56614203 + MER5A DNA MER1_type 36 159 -30 1855 129 4 0 chr17 32890427 32890705 -56613848 + AluSx SINE Alu 1 279 -33 285 98 0 0 chr17 32890706 32890747 -56613806 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 187 285 35 130 chr17 32891313 32891744 -56612809 - L2 LINE L2 -41 3231 2842 2018 121 0 29 chr17 32891843 32892015 -56612538 - AluSx SINE Alu -7 305 145 2411 77 0 0 chr17 32892015 32892326 -56612227 - AluSp SINE Alu -2 311 1 2018 121 0 29 chr17 32892326 32892467 -56612086 - AluSx SINE Alu -167 145 1 2126 100 0 19 chr17 32893091 32893401 -56611152 + AluSx SINE Alu 1 304 -8 1253 204 84 0 chr17 32893595 32893894 -56610659 - MER33 DNA MER1_type 0 324 1 1649 100 100 33 chr17 32894178 32894449 -56610104 + AluSg SINE Alu 1 289 -21 2540 145 5 0 chr17 32894524 32894910 -56609643 - MLT1B LTR MaLR -2 388 1 1881 139 4 4 chr17 32894947 32895252 -56609301 + AluJo SINE Alu 1 305 0 204 311 170 0 chr17 32896243 32896349 -56608204 + L2 LINE L2 3185 3308 -5 330 244 33 11 chr17 32897234 32897324 -56607229 - LTR67 LTR ERVL -368 189 98 282 130 304 0 chr17 32897392 32897461 -56607092 + L1MB3 LINE L1 6051 6140 -43 848 102 8 16 chr17 32897463 32897590 -56606963 + AluJb SINE Alu 1 126 -186 1827 122 0 48 chr17 32897592 32897738 -56606815 + AluJb SINE Alu 1 126 -186 1893 102 39 39 chr17 32897738 32898043 -56606510 + AluY SINE Alu 1 305 -6 1827 122 0 48 chr17 32898043 32898208 -56606345 + AluJb SINE Alu 126 297 -15 2008 108 3 7 chr17 32899256 32899543 -56605010 + AluSp SINE Alu 3 288 -25 32 26 0 0 chr17 32899543 32899582 -56604971 + AT_rich Low_complexity Low_complexity 1 39 0 2284 76 0 0 chr17 32899797 32900099 -56604454 - AluY SINE Alu -9 302 1 1641 162 0 72 chr17 32900478 32900812 -56603741 + AluJo SINE Alu 1 310 -2 1908 133 4 14 chr17 32900967 32901245 -56603308 + MER1A DNA MER1_type 56 330 -199 2098 98 0 33 chr17 32901250 32901556 -56602997 + AluSg SINE Alu 1 296 -14 792 151 0 0 chr17 32901556 32901675 -56602878 + MER1A DNA MER1_type 415 533 0 1663 165 17 7 chr17 32901737 32902034 -56602519 - AluJo SINE Alu -10 302 3 294 50 0 0 chr17 32902036 32902076 -56602477 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2083 97 0 0 chr17 32902076 32902354 -56602199 - AluSx SINE Alu -29 283 6 2349 74 0 0 chr17 32902723 32903045 -56601508 - AluY SINE Alu 0 311 1 371 319 21 27 chr17 32903277 32903465 -56601088 - LTR16B LTR ERVL 0 464 278 270 322 11 11 chr17 32903505 32903592 -56600961 - LTR16B LTR ERVL -247 217 131 257 132 53 0 chr17 32903636 32903674 -56600879 + Alu SINE Alu 1 40 -268 1802 145 30 3 chr17 32903692 32903858 -56600695 - AluSx SINE Alu 0 312 133 1945 94 0 57 chr17 32903858 32904155 -56600398 - AluSx SINE Alu -32 280 1 1802 145 30 3 chr17 32904155 32904292 -56600261 - AluSx SINE Alu -179 133 1 694 135 19 0 chr17 32904292 32904396 -56600157 + FLAM_C SINE Alu 26 131 -12 298 310 50 0 chr17 32904412 32904512 -56600041 - LTR16A LTR ERVL -336 114 10 2290 81 7 0 chr17 32904662 32904958 -56599595 - AluSq SINE Alu -15 298 1 27 0 0 0 chr17 32905082 32905109 -56599444 + AT_rich Low_complexity Low_complexity 1 27 0 281 294 32 48 chr17 32905192 32905318 -56599235 + MIR SINE MIR 15 138 -124 246 279 0 0 chr17 32905403 32905471 -56599082 + MARNA DNA Mariner 321 388 -198 2827 163 16 51 chr17 32905513 32906021 -56598532 + L1MB3 LINE L1 5624 6148 -35 2106 85 3 0 chr17 32906021 32906303 -56598250 + AluSc SINE Alu 9 291 -18 2827 163 16 51 chr17 32906303 32906314 -56598239 + L1MB3 LINE L1 6148 6158 -25 2033 119 0 10 chr17 32906314 32906608 -56597945 + AluSx SINE Alu 1 291 -21 2827 163 16 51 chr17 32906608 32906658 -56597895 + L1MB3 LINE L1 6158 6174 -9 21 0 0 0 chr17 32906658 32906679 -56597874 + AT_rich Low_complexity Low_complexity 1 21 0 1532 150 0 81 chr17 32906697 32907028 -56597525 - AluJb SINE Alu 0 306 1 22 35 0 0 chr17 32907124 32907153 -56597400 + AT_rich Low_complexity Low_complexity 1 29 0 2186 127 48 25 chr17 32907160 32907334 -56597219 + THE1B LTR MaLR 3 172 -192 2184 110 0 0 chr17 32907334 32907633 -56596920 + AluSx SINE Alu 1 299 -13 2186 127 48 25 chr17 32907633 32907812 -56596741 + THE1B LTR MaLR 172 364 0 21 0 0 0 chr17 32907825 32907846 -56596707 + AT_rich Low_complexity Low_complexity 1 21 0 305 329 90 7 chr17 32908440 32908595 -56595958 + MIR SINE MIR 83 250 -12 2104 121 0 0 chr17 32908724 32909031 -56595522 + AluSx SINE Alu 1 307 -5 1910 139 0 7 chr17 32909066 32909367 -56595186 + AluJb SINE Alu 5 303 -9 1950 120 0 7 chr17 32909553 32909870 -56594683 - AluSx SINE Alu 0 315 1 560 243 81 0 chr17 32909910 32910058 -56594495 - MLT1J2 LTR MaLR -38 412 253 1659 143 15 80 chr17 32910198 32910317 -56594236 + L1ME LINE L1 5211 5336 -830 2346 80 0 0 chr17 32910317 32910617 -56593936 + AluY SINE Alu 1 300 -11 1659 143 15 80 chr17 32910617 32910781 -56593772 + L1ME LINE L1 5336 5456 -710 2124 99 3 7 chr17 32910781 32911075 -56593478 + AluSg1 SINE Alu 1 293 -16 1659 143 15 80 chr17 32911075 32911204 -56593349 + L1ME LINE L1 5456 5592 -574 520 263 133 26 chr17 32911395 32911711 -56592842 + L1M4 LINE L1 4035 4410 -1736 599 230 32 0 chr17 32911711 32911837 -56592716 + FLAM_A SINE Alu 4 133 0 520 263 133 26 chr17 32911837 32911950 -56592603 + L1M4 LINE L1 4410 4510 -1636 1975 141 3 0 chr17 32912005 32912304 -56592249 + AluSq SINE Alu 1 300 -13 373 249 75 17 chr17 32912314 32912487 -56592066 + Zaphod DNA AcHobo 3677 3859 -172 1781 162 13 3 chr17 32912487 32912789 -56591764 - AluJo SINE Alu -7 305 1 2044 135 0 0 chr17 32913091 32913394 -56591159 + AluSx SINE Alu 1 303 -9 281 160 20 0 chr17 32913458 32913508 -56591045 + MER66B LTR ERV1 295 345 -141 2063 119 3 0 chr17 32913549 32913844 -56590709 + AluSx SINE Alu 1 296 -16 1593 168 63 58 chr17 32914019 32914401 -56590152 + MLT1B LTR MaLR 7 390 0 190 274 67 74 chr17 32914454 32914589 -56589964 + L2 LINE L2 2547 2680 -634 297 279 62 90 chr17 32914872 32914917 -56589636 - MLT1K LTR MaLR -199 389 344 2027 116 0 20 chr17 32914917 32915219 -56589334 + AluJb SINE Alu 1 296 -16 297 279 62 90 chr17 32915219 32915417 -56589136 - MLT1K LTR MaLR -244 344 153 453 282 100 70 chr17 32915957 32916122 -56588431 + L1ME4a LINE L1 5488 5647 -474 1964 129 7 3 chr17 32916122 32916417 -56588136 + AluSx SINE Alu 1 296 -16 1884 104 4 8 chr17 32916423 32916691 -56587862 + AluSx SINE Alu 44 310 -2 453 282 100 70 chr17 32916691 32916848 -56587705 + L1ME4a LINE L1 5651 5827 -294 * 609 262 122 66 chr17 32916835 32916899 -56587654 + L1MC4a LINE L1 5328 5387 -734 2096 90 0 48 chr17 32916899 32917064 -56587489 - AluSg SINE Alu -15 295 150 1812 102 13 70 chr17 32917064 32917378 -56587175 - AluY SINE Alu -14 297 2 2096 90 0 48 chr17 32917378 32917522 -56587031 - AluSg SINE Alu -160 150 1 609 262 122 66 chr17 32917522 32918018 -56586535 + L1MC4a LINE L1 5387 5889 -232 2157 116 0 0 chr17 32918362 32918663 -56585890 + AluSx SINE Alu 1 301 -11 1354 154 5 0 chr17 32918768 32918989 -56585564 - AluJb SINE Alu -4 308 87 29 47 0 0 chr17 32919012 32919055 -56585498 + AT_rich Low_complexity Low_complexity 1 43 0 574 236 20 14 chr17 32919335 32919483 -56585070 + L1ME4a LINE L1 5548 5696 -425 447 287 168 22 chr17 32919498 32919766 -56584787 + L1ME4a LINE L1 5803 6109 -12 349 254 296 18 chr17 32919891 32920060 -56584493 - MIR SINE MIR 0 262 47 492 294 130 17 chr17 32920073 32920304 -56584249 - MIR SINE MIR 0 262 6 754 164 0 16 chr17 32920399 32920527 -56584026 + FLAM_C SINE Alu 2 127 -16 899 253 120 29 chr17 32921121 32921496 -56583057 + L1ME3 LINE L1 5478 5886 -276 1677 157 45 0 chr17 32921861 32922147 -56582406 + AluJb SINE Alu 1 299 -13 494 240 143 10 chr17 32922296 32922497 -56582056 + MIR SINE MIR 7 236 -26 470 168 53 26 chr17 32922515 32922628 -56581925 + L1MC3 LINE L1 7365 7480 -305 * 1237 154 99 4 chr17 32922621 32922874 -56581679 + L1MB3 LINE L1 5894 6170 -13 2134 116 0 0 chr17 32922877 32923179 -56581374 - AluSx SINE Alu -10 302 1 1304 177 49 4 chr17 32923216 32923481 -56581072 + L1MC3 LINE L1 7465 7741 -44 1808 155 28 0 chr17 32923498 32923788 -56580765 - AluJb SINE Alu -14 298 1 591 137 11 0 chr17 32923811 32923906 -56580647 - L1MB3 LINE L1 -12 6171 6076 45 93 0 6 chr17 32923940 32923967 -56580586 + AT_rich Low_complexity Low_complexity 1 27 -133 1983 138 0 0 chr17 32923967 32924257 -56580296 - AluSx SINE Alu -22 290 1 45 93 0 6 chr17 32924257 32924390 -56580163 + AT_rich Low_complexity Low_complexity 27 160 0 294 182 61 0 chr17 32924390 32924489 -56580064 + (TA)n Simple_repeat Simple_repeat 2 106 0 2115 119 7 0 chr17 32924536 32924846 -56579707 + AluSx SINE Alu 1 312 0 341 247 70 12 chr17 32925253 32925399 -56579154 - MIR SINE MIR -61 147 28 365 259 141 83 chr17 32925450 32925918 -56578635 + L1MEd LINE L1 2 496 -5623 1835 238 80 124 chr17 32925956 32926253 -56578300 - L2 LINE L2 -290 3023 2714 230 125 50 0 chr17 32926253 32926293 -56578260 + L1ME LINE L1 5523 5564 -606 1835 238 80 124 chr17 32926293 32926661 -56577892 - L2 LINE L2 -599 2714 2331 3981 119 49 62 chr17 32926661 32927022 -56577531 - LTR12 LTR ERV1 0 688 339 2008 93 0 11 chr17 32927022 32927302 -56577251 - AluY SINE Alu -12 299 23 3981 119 49 62 chr17 32927302 32927636 -56576917 - LTR12 LTR ERV1 -349 339 2 1769 113 4 22 chr17 32927637 32927742 -56576811 + AluSp SINE Alu 31 136 -177 2181 84 0 23 chr17 32927742 32928051 -56576502 + AluY SINE Alu 1 302 -9 1769 113 4 22 chr17 32928051 32928220 -56576333 + AluSp SINE Alu 136 300 -13 1835 238 80 124 chr17 32928220 32928251 -56576302 - L2 LINE L2 -982 2331 2300 2069 99 3 14 chr17 32928251 32928575 -56575978 - AluSg SINE Alu 0 310 1 1835 238 80 124 chr17 32928575 32928636 -56575917 - L2 LINE L2 -1013 2300 2238 1620 184 7 16 chr17 32928636 32928941 -56575612 + AluJb SINE Alu 1 302 -10 1835 238 80 124 chr17 32928941 32929225 -56575328 - L2 LINE L2 -1075 2238 1989 1639 159 3 20 chr17 32929270 32929572 -56574981 + AluSx SINE Alu 2 298 -14 457 183 30 17 chr17 32929636 32929752 -56574801 + L1MC3 LINE L1 7364 7689 -306 233 333 0 14 chr17 32929755 32929824 -56574729 - L2 LINE L2 -1418 1896 1829 1354 229 45 64 chr17 32929853 32929918 -56574635 + L1ME3A LINE L1 5470 5535 -635 2178 114 0 0 chr17 32929918 32930216 -56574337 - AluSx SINE Alu -14 298 1 2242 96 0 0 chr17 32930223 32930516 -56574037 - AluSg SINE Alu -17 293 1 1354 229 45 64 chr17 32930516 32930865 -56573688 + L1ME3A LINE L1 5541 5884 -286 512 202 10 0 chr17 32930862 32930966 -56573587 + L1MA4A LINE L1 6017 6121 -182 * 1437 138 22 0 chr17 32930967 32931198 -56573355 - AluJb SINE Alu -10 302 67 253 88 0 0 chr17 32931226 32931260 -56573293 - L1MA4A LINE L1 -154 6149 6116 835 156 0 0 chr17 32931264 32931392 -56573161 + AluJb SINE Alu 3 130 -182 2193 146 5 61 chr17 32931392 32931467 -56573086 + L1MB5 LINE L1 5759 5837 -337 1854 125 19 29 chr17 32931467 32931780 -56572773 + AluSx SINE Alu 1 310 -2 2193 146 5 61 chr17 32931780 32932130 -56572423 + L1MB5 LINE L1 5837 6160 -14 484 138 85 0 chr17 32932042 32932136 -56572417 + L1MB4 LINE L1 6076 6177 -3 414 275 58 47 chr17 32932139 32932310 -56572243 + L1ME3A LINE L1 5940 6112 -58 880 284 101 3 chr17 32932311 32932667 -56571886 - L2 LINE L2 -1506 1808 1418 218 325 119 1 chr17 32932677 32932795 -56571758 - MIR SINE MIR -61 147 23 363 277 12 0 chr17 32932933 32933016 -56571537 - L1MC4 LINE L1 -1339 6703 6620 360 255 0 43 chr17 32932945 32933039 -56571514 + L1MC4 LINE L1 6614 6703 -1339 * 413 250 81 15 chr17 32933585 32933721 -56570832 - MLT1L LTR MaLR -49 566 422 2555 101 27 5 chr17 32933748 32934115 -56570438 + THE1C LTR MaLR 1 375 0 1401 234 142 16 chr17 32934118 32934284 -56570269 + MLT1D LTR MaLR 21 165 -340 2310 94 0 0 chr17 32934284 32934591 -56569962 + AluSg SINE Alu 1 307 -3 1401 234 142 16 chr17 32934591 32934855 -56569698 + MLT1D LTR MaLR 165 505 0 2118 94 3 24 chr17 32935251 32935549 -56569004 + AluSg SINE Alu 3 294 -16 665 314 42 24 chr17 32935573 32935910 -56568643 + L2 LINE L2 2404 2746 -568 379 306 103 55 chr17 32935934 32936098 -56568455 + L2 LINE L2 2855 3010 -262 2299 86 0 0 chr17 32936098 32936399 -56568154 + AluSx SINE Alu 6 306 -6 379 306 103 55 chr17 32936399 32936632 -56567921 + L2 LINE L2 3010 3271 -1 335 229 100 8 chr17 32936741 32936859 -56567694 + MIR SINE MIR 32 170 -63 967 118 0 0 chr17 32938459 32938594 -56565959 + AluSq/x SINE Alu 1 135 -177 2167 89 7 7 chr17 32938594 32938897 -56565656 + AluSx SINE Alu 1 303 -9 2159 108 0 22 chr17 32939334 32939649 -56564904 - AluSx SINE Alu -4 308 1 448 315 94 33 chr17 32940507 32940869 -56563684 + L2 LINE L2 1933 2316 -998 359 224 237 83 chr17 32940856 32940983 -56563570 + L3 LINE CR1 1204 1310 -267 * 2084 119 0 0 chr17 32940983 32941285 -56563268 - AluSx SINE Alu -10 302 1 359 224 237 83 chr17 32941285 32941385 -56563168 + L3 LINE CR1 1310 1466 -111 1849 138 0 39 chr17 32941631 32941942 -56562611 - AluJb SINE Alu -13 299 1 2190 91 0 7 chr17 32942117 32942415 -56562138 + AluSg1 SINE Alu 1 296 -13 268 376 81 13 chr17 32942595 32942744 -56561809 - L2 LINE L2 -17 3255 3097 2300 87 0 10 chr17 32942808 32943119 -56561434 + AluSx SINE Alu 1 308 -4 1091 47 13 27 chr17 32943146 32943295 -56561258 + L1PB1 LINE L1 6003 6149 -2 2151 114 0 0 chr17 32943621 32943920 -56560633 + AluSq SINE Alu 1 299 -14 2217 85 0 0 chr17 32943921 32944215 -56560338 + AluY SINE Alu 1 294 -17 263 209 79 106 chr17 32944956 32945037 -56559516 + MIR SINE MIR 16 100 -108 2376 88 0 0 chr17 32945037 32945343 -56559210 - AluSx SINE Alu -6 306 1 263 209 79 106 chr17 32945343 32945389 -56559164 + MIR SINE MIR 100 146 -62 2133 90 23 13 chr17 32945397 32945707 -56558846 - AluSp SINE Alu 0 313 1 1886 144 7 3 chr17 32946064 32946369 -56558184 + AluSx SINE Alu 1 306 -6 213 39 0 0 chr17 32946854 32946880 -56557673 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 2298 82 0 7 chr17 32947890 32948194 -56556359 - AluSg1 SINE Alu -5 304 3 413 170 107 204 chr17 32948517 32948603 -56555950 + MIR SINE MIR 6 99 -163 1733 148 54 7 chr17 32948603 32948900 -56555653 + AluJb SINE Alu 1 311 -1 413 170 107 204 chr17 32948900 32948940 -56555613 + MIR SINE MIR 99 141 -121 3096 156 20 38 chr17 32948940 32949524 -56555029 + L1MB5 LINE L1 5600 6173 -1 413 170 107 204 chr17 32949524 32949602 -56554951 + MIR SINE MIR 141 191 -71 2281 87 0 13 chr17 32949610 32949746 -56554807 + AluSx SINE Alu 1 137 -175 1948 82 43 7 chr17 32949746 32950053 -56554500 + AluY SINE Alu 1 311 0 2281 87 0 13 chr17 32950053 32950228 -56554325 + AluSx SINE Alu 137 308 -4 2129 108 7 0 chr17 32950230 32950526 -56554027 + AluSq SINE Alu 1 298 -15 283 95 0 48 chr17 32950534 32950576 -56553977 + Alu SINE Alu 1 40 -262 1952 113 14 0 chr17 32950576 32950860 -56553693 + AluSx SINE Alu 5 292 -20 780 158 201 34 chr17 32950860 32951069 -56553484 + Tigger7 DNA MER2_type 2344 2587 0 911 215 220 35 chr17 32951426 32951965 -56552588 + LTR50 LTR ERVL 1 738 -57 395 289 29 0 chr17 32952170 32952274 -56552279 + MIR SINE MIR 42 148 -60 225 274 145 16 chr17 32952914 32953038 -56551515 - L2 LINE L2 -2 3311 3172 24 32 0 0 chr17 32953416 32953447 -56551106 + GC_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr17 32953524 32953561 -56550992 + GC_rich Low_complexity Low_complexity 1 37 0 23 101 0 0 chr17 32953626 32953705 -56550848 + GC_rich Low_complexity Low_complexity 1 79 0 33 56 0 0 chr17 32953871 32953925 -56550628 + GC_rich Low_complexity Low_complexity 1 54 0 613 193 171 59 chr17 32954618 32954805 -56549748 + MER3 DNA MER1_type 1 208 -1 2110 107 10 7 chr17 32955066 32955376 -56549177 + AluSx SINE Alu 1 311 -1 830 139 36 7 chr17 32955625 32955762 -56548791 + AluSg/x SINE Alu 154 294 -18 1589 158 17 34 chr17 32955848 32956146 -56548407 + AluJo SINE Alu 1 293 -19 654 244 183 45 chr17 32956208 32956530 -56548023 + L1ME4a LINE L1 5378 5779 -342 1921 113 10 14 chr17 32956530 32956822 -56547731 + AluSg SINE Alu 1 291 -19 654 244 183 45 chr17 32956822 32956942 -56547611 + L1ME4a LINE L1 5779 5881 -240 2217 94 0 10 chr17 32957082 32957390 -56547163 - AluSq SINE Alu -8 305 1 665 185 0 0 chr17 32957583 32957691 -56546862 + FLAM_A SINE Alu 8 115 -27 25 0 0 0 chr17 32957695 32957720 -56546833 + AT_rich Low_complexity Low_complexity 1 25 0 1806 172 7 0 chr17 32958209 32958512 -56546041 - AluJb SINE Alu -2 310 6 2099 121 0 7 chr17 32958619 32958926 -56545627 + AluSx SINE Alu 1 305 -7 1024 203 4 30 chr17 32959139 32959376 -56545177 - AluJo SINE Alu -12 300 70 2008 108 21 0 chr17 32959527 32959829 -56544724 - AluSq SINE Alu 0 308 1 256 209 30 45 chr17 32960363 32960430 -56544123 + MIR SINE MIR 75 140 -122 1951 69 0 0 chr17 32960576 32960823 -56543730 + AluY SINE Alu 55 301 -10 2107 84 6 26 chr17 32960831 32960963 -56543590 + AluSg SINE Alu 2 135 -175 2024 90 45 17 chr17 32960963 32961252 -56543301 + AluSg SINE Alu 1 297 -13 2107 84 6 26 chr17 32961252 32961430 -56543123 + AluSg SINE Alu 135 306 -4 360 256 105 63 chr17 32961481 32961719 -56542834 - MIR SINE MIR -14 248 1 2085 114 0 0 chr17 32961743 32962040 -56542513 + AluSx SINE Alu 2 298 -14 2209 99 0 3 chr17 32962192 32962495 -56542058 + AluSc SINE Alu 1 302 -7 1882 164 0 3 chr17 32962834 32963145 -56541408 - AluJo SINE Alu 0 312 3 373 209 28 34 chr17 32963228 32963331 -56541222 + L1ME LINE L1 5624 5714 -407 2043 117 10 0 chr17 32963348 32963639 -56540914 + AluSx SINE Alu 1 294 -18 1561 169 10 41 chr17 32963681 32963995 -56540558 - AluJo SINE Alu -8 304 1 1071 165 0 0 chr17 32964001 32964165 -56540388 - FRAM SINE Alu -2 164 1 4615 148 25 10 chr17 32964179 32964520 -56540033 - L1PA16 LINE L1 0 6166 5826 1191 256 89 20 chr17 32964520 32965023 -56539530 - L1ME3A LINE L1 -344 5826 5289 2385 77 0 6 chr17 32965026 32965337 -56539216 - AluY SINE Alu 0 311 3 1260 239 0 17 chr17 32965340 32965504 -56539049 - AluJo SINE Alu -20 292 134 2416 59 0 10 chr17 32965504 32965808 -56538745 - AluY SINE Alu -10 301 1 1260 239 0 17 chr17 32965808 32965940 -56538613 - AluJo SINE Alu -178 134 1 685 241 0 7 chr17 32965983 32966128 -56538425 + AluJo SINE Alu 2 145 -167 1786 160 7 0 chr17 32966129 32966422 -56538131 + AluSx SINE Alu 2 296 -16 2110 104 0 3 chr17 32966428 32966726 -56537827 + AluSx SINE Alu 1 297 -15 1549 199 0 26 chr17 32966902 32967208 -56537345 + AluJo SINE Alu 1 298 -14 1215 148 20 0 chr17 32967235 32967431 -56537122 + AluSx SINE Alu 1 200 -112 198 118 0 0 chr17 32967436 32967470 -56537083 + (A)n Simple_repeat Simple_repeat 1 34 0 2029 120 3 13 chr17 32967485 32967785 -56536768 + AluSx SINE Alu 1 297 -15 376 71 18 0 chr17 32968305 32968361 -56536192 + L1MA4A LINE L1 6236 6292 -11 1937 141 3 0 chr17 32968786 32969077 -56535476 + AluSx SINE Alu 6 297 -15 2090 113 3 3 chr17 32969166 32969466 -56535087 + AluSx SINE Alu 1 300 -12 2104 118 7 3 chr17 32970059 32970364 -56534189 + AluSc SINE Alu 1 306 -3 2121 102 6 13 chr17 32970539 32970852 -56533701 - AluSq SINE Alu -1 312 2 2290 93 3 0 chr17 32970879 32971190 -56533363 + AluSp SINE Alu 1 312 -1 1984 141 0 13 chr17 32971246 32971559 -56532994 + AluSx SINE Alu 1 309 -3 228 349 27 23 chr17 32971573 32971834 -56532719 + L1ME LINE L1 5491 5752 -369 254 204 272 29 chr17 32971870 32971973 -56532580 - L2 LINE L2 -7 3306 3179 936 133 0 0 chr17 32972066 32972201 -56532352 + AluSq/x SINE Alu 1 135 -177 2084 120 3 0 chr17 32972202 32972501 -56532052 + AluSx SINE Alu 1 300 -12 1948 133 0 0 chr17 32973632 32973911 -56530642 + AluSx SINE Alu 9 287 -25 1578 160 0 7 chr17 32973928 32974197 -56530356 + AluJb SINE Alu 25 291 -21 2192 114 0 0 chr17 32974340 32974647 -56529906 + AluSx SINE Alu 1 307 -5 1912 126 0 29 chr17 32974648 32974958 -56529595 + AluSx SINE Alu 3 303 -9 1948 116 17 7 chr17 32975408 32975701 -56528852 + AluSx SINE Alu 1 296 -16 1835 151 10 19 chr17 32975776 32976088 -56528465 - AluSx SINE Alu -3 309 1 1390 142 95 15 chr17 32976220 32976494 -56528059 - AluJb SINE Alu -16 296 1 228 35 0 0 chr17 32976532 32976561 -56527992 + (TG)n Simple_repeat Simple_repeat 2 30 0 2101 97 0 0 chr17 32976561 32976839 -56527714 - AluSq SINE Alu -27 286 9 2092 106 3 7 chr17 32976844 32977137 -56527416 - AluSc SINE Alu -17 292 1 1255 157 5 14 chr17 32977302 32977518 -56527035 - AluJb SINE Alu -12 300 87 844 174 0 14 chr17 32977568 32977712 -56526841 + FLAM_C SINE Alu 1 142 -1 2210 97 3 0 chr17 32977833 32978131 -56526422 - AluSp SINE Alu -14 299 1 1517 187 28 3 chr17 32978202 32978486 -56526067 - AluJb SINE Alu -21 291 1 2153 102 7 0 chr17 32978519 32978814 -56525739 - AluSx SINE Alu -15 297 1 1566 183 29 0 chr17 32979293 32979572 -56524981 + AluJb SINE Alu 6 292 -20 623 88 239 2 chr17 32979576 32979682 -56524871 + L1PB1 LINE L1 6011 6134 -17 2011 93 57 0 chr17 32979682 32979961 -56524592 - AluSx SINE Alu -17 295 1 623 88 239 2 chr17 32979961 32979976 -56524577 + L1PB1 LINE L1 6134 6144 -7 2038 121 0 0 chr17 32980025 32980314 -56524239 + AluSg SINE Alu 2 290 -20 305 252 104 17 chr17 32980657 32980772 -56523781 + MIR3 SINE MIR 73 197 -11 2084 103 0 3 chr17 32980898 32981190 -56523363 + AluSq SINE Alu 1 291 -22 21 0 0 0 chr17 32981273 32981294 -56523259 + AT_rich Low_complexity Low_complexity 1 21 0 783 83 9 0 chr17 32981555 32981664 -56522889 + AluSg/x SINE Alu 196 305 -5 1461 187 14 21 chr17 32981877 32982166 -56522387 - AluJo SINE Alu -23 289 3 2165 110 3 0 chr17 32982196 32982504 -56522049 + AluSq SINE Alu 1 309 -4 1907 132 50 0 chr17 32982943 32983224 -56521329 + AluSx SINE Alu 1 295 -17 2263 86 7 3 chr17 32983306 32983597 -56520956 + AluY SINE Alu 1 292 -19 952 113 0 15 chr17 32983599 32983732 -56520821 + AluSq SINE Alu 81 211 -102 2567 53 7 7 chr17 32984012 32984314 -56520239 - AluY SINE Alu -9 302 1 1603 167 60 4 chr17 32984531 32984812 -56519741 - AluJb SINE Alu -15 297 1 2027 136 0 7 chr17 32984850 32985144 -56519409 + AluSx SINE Alu 1 292 -20 2081 143 0 7 chr17 32985220 32985527 -56519026 + AluSx SINE Alu 1 305 -7 2341 81 0 7 chr17 32986257 32986553 -56518000 + AluSg SINE Alu 1 294 -16 2046 129 0 29 chr17 32987407 32987543 -56517010 + AluSx SINE Alu 1 139 -173 1598 116 68 8 chr17 32987543 32987793 -56516760 + AluSq SINE Alu 39 303 -10 2046 129 0 29 chr17 32987793 32987966 -56516587 + AluSx SINE Alu 139 301 -11 2136 115 7 16 chr17 32987966 32988270 -56516283 + AluSx SINE Alu 1 301 -11 1929 163 0 0 chr17 32988518 32988812 -56515741 + AluSx SINE Alu 18 311 -1 250 286 0 0 chr17 32989006 32989069 -56515484 + MARNA DNA Mariner 422 484 -102 2279 114 0 0 chr17 32990048 32990347 -56514206 - AluSx SINE Alu -13 299 1 298 210 90 18 chr17 32990357 32990599 -56513954 - L1M LINE L1 -806 5340 5175 1701 132 21 0 chr17 32990615 32990858 -56513695 - AluJb SINE Alu -16 296 49 1638 152 35 21 chr17 32990974 32991264 -56513289 + AluJo SINE Alu 1 294 -18 2341 88 7 7 chr17 32991414 32991719 -56512834 - AluSq SINE Alu -8 305 1 240 211 0 0 chr17 32991759 32991811 -56512742 - L3 LINE CR1 -817 760 709 207 196 18 36 chr17 32991985 32992041 -56512512 - L3 LINE CR1 -1124 453 399 2210 81 42 0 chr17 32992226 32992511 -56512042 + AluSq SINE Alu 1 297 -16 625 93 0 56 chr17 32992562 32992669 -56511884 + AluSg/x SINE Alu 174 274 -36 183 80 0 0 chr17 32992673 32992698 -56511855 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1797 152 30 17 chr17 32992726 32993023 -56511530 + AluSx SINE Alu 1 301 -11 1185 161 186 16 chr17 32993027 32993275 -56511278 + AluJb SINE Alu 1 290 -12 1604 162 63 36 chr17 32993296 32993598 -56510955 + AluSg SINE Alu 1 310 0 2286 103 0 0 chr17 32993835 32994125 -56510428 + AluSc SINE Alu 1 290 -19 2347 69 31 0 chr17 32994271 32994561 -56509992 - AluSg SINE Alu -11 299 1 21 0 0 0 chr17 32994601 32994622 -56509931 + AT_rich Low_complexity Low_complexity 1 21 0 240 241 72 60 chr17 32994995 32995078 -56509475 - L2 LINE L2 -22 3291 3208 2092 71 60 7 chr17 32996107 32996396 -56508157 + AluSq SINE Alu 1 303 0 316 262 28 28 chr17 32997029 32997136 -56507417 + L2 LINE L2 3189 3295 -18 2010 129 0 0 chr17 32997260 32997571 -56506982 - AluSc SINE Alu 0 311 1 180 0 0 0 chr17 32997614 32997634 -56506919 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 1026 105 7 13 chr17 32997659 32997811 -56506742 + AluSq/x SINE Alu 1 151 -162 714 94 125 23 chr17 32997811 32997939 -56506614 - AluSg/x SINE Alu -40 270 130 1250 159 0 27 chr17 32997942 32998162 -56506391 - AluJo SINE Alu -15 297 84 603 197 23 38 chr17 32998163 32998295 -56506258 - AluJo/FLAM SINE Alu -171 131 2 2454 81 0 0 chr17 32998321 32998617 -56505936 - AluSq SINE Alu -17 296 1 1929 94 29 14 chr17 32998643 32998951 -56505602 - AluSg SINE Alu 0 312 1 2396 78 0 3 chr17 32998987 32999281 -56505272 + AluSg SINE Alu 1 293 -17 1695 127 32 0 chr17 32999292 32999544 -56505009 + AluSx SINE Alu 38 297 -15 903 135 0 0 chr17 32999544 32999670 -56504883 + AluSg/x SINE Alu 169 294 -16 832 127 0 22 chr17 32999734 32999868 -56504685 + AluSg SINE Alu 1 131 -179 2398 102 0 0 chr17 32999936 33000241 -56504312 - AluSq SINE Alu -8 305 1 387 164 17 2 chr17 33000320 33000405 -56504148 + AluS SINE Alu 228 300 0 1919 130 0 46 chr17 33000479 33000786 -56503767 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr17 33000999 33001020 -56503533 + AT_rich Low_complexity Low_complexity 1 21 0 258 56 0 0 chr17 33002557 33002593 -56501960 + (TG)n Simple_repeat Simple_repeat 2 37 0 234 327 82 9 chr17 33002614 33002724 -56501829 + L2 LINE L2 2866 2983 -289 25 0 0 0 chr17 33002741 33002766 -56501787 + AT_rich Low_complexity Low_complexity 1 25 0 2746 227 70 44 chr17 33002837 33002925 -56501628 + L2 LINE L2 2131 2215 -1098 1132 137 13 97 chr17 33002925 33003062 -56501491 + MER3 DNA MER1_type 1 113 -96 2325 99 0 16 chr17 33003062 33003365 -56501188 - AluSx SINE Alu -14 298 1 1132 137 13 97 chr17 33003365 33003453 -56501100 + MER3 DNA MER1_type 113 207 -2 2746 227 70 44 chr17 33003453 33004003 -56500550 + L2 LINE L2 2215 2810 -503 2178 103 20 0 chr17 33004003 33004295 -56500258 + AluSp SINE Alu 1 298 -15 2746 227 70 44 chr17 33004295 33004707 -56499846 + L2 LINE L2 2810 3210 -103 2285 83 35 0 chr17 33004715 33005003 -56499550 - AluY SINE Alu -13 298 1 2300 84 7 3 chr17 33005003 33005301 -56499252 - AluSq SINE Alu -13 300 1 1900 137 38 0 chr17 33005392 33005685 -56498868 - AluSx SINE Alu 0 312 9 1598 127 0 0 chr17 33005711 33005939 -56498614 - AluSg/x SINE Alu -1 309 82 2584 70 3 0 chr17 33006943 33007255 -56497298 - AluSp SINE Alu 0 313 1 2365 90 0 0 chr17 33007373 33007672 -56496881 + AluSg SINE Alu 1 299 -11 816 253 94 26 chr17 33007987 33008370 -56496183 + L1MC4a LINE L1 5576 5984 -137 2146 100 17 0 chr17 33008374 33008663 -56495890 + AluSq SINE Alu 1 294 -19 2101 128 0 0 chr17 33008782 33009085 -56495468 - AluSc SINE Alu 0 303 1 2278 98 3 14 chr17 33009096 33009392 -56495161 - AluSp SINE Alu -20 293 1 383 280 32 55 chr17 33009995 33010205 -56494348 - MIR SINE MIR -9 253 48 1872 132 30 0 chr17 33010242 33010538 -56494015 - AluSx SINE Alu -3 309 5 1534 202 128 73 chr17 33011793 33011901 -56492652 - HAL1 LINE L1 -258 2249 2148 2370 85 3 3 chr17 33011901 33012207 -56492346 + AluSp SINE Alu 2 307 -6 1534 202 128 73 chr17 33012207 33012247 -56492306 - HAL1 LINE L1 -359 2148 2112 2076 106 34 0 chr17 33012247 33012540 -56492013 - AluSq SINE Alu -10 303 1 1534 202 128 73 chr17 33012540 33012975 -56491578 - HAL1 LINE L1 -395 2112 1633 880 147 7 0 chr17 33012975 33013111 -56491442 - FAM SINE Alu -13 172 36 417 206 122 38 chr17 33013113 33013244 -56491309 - HAL1 LINE L1 -867 1640 1499 1217 126 0 0 chr17 33013281 33013455 -56491098 - AluSg/x SINE Alu -5 305 132 2226 119 3 0 chr17 33013551 33013854 -56490699 + AluSx SINE Alu 1 304 -8 1271 111 0 0 chr17 33013855 33014026 -56490527 + AluSg/x SINE Alu 133 303 -9 2377 86 0 0 chr17 33015205 33015496 -56489057 - AluSg SINE Alu -19 291 1 2024 117 27 7 chr17 33015561 33015861 -56488692 - AluSx SINE Alu -6 306 1 1968 128 7 10 chr17 33015915 33016211 -56488342 + AluSx SINE Alu 3 297 -15 1991 125 27 0 chr17 33016252 33016549 -56488004 + AluSx SINE Alu 1 305 -7 223 196 18 0 chr17 33016600 33016656 -56487897 - MER5C DNA MER1_type -7 317 261 885 144 0 0 chr17 33017138 33017270 -56487283 + FLAM_C SINE Alu 1 132 -1 1807 174 3 3 chr17 33017293 33017591 -56486962 + AluJb SINE Alu 1 298 -14 191 286 61 0 chr17 33017647 33017696 -56486857 - MIR SINE MIR -177 85 34 2001 90 13 57 chr17 33018143 33018443 -56486110 - AluY SINE Alu -24 287 1 2166 72 3 84 chr17 33018475 33018807 -56485746 - AluSg SINE Alu -5 305 1 521 113 125 0 chr17 33018838 33018918 -56485635 - 5S rRNA rRNA -31 90 1 2072 136 0 3 chr17 33019001 33019309 -56485244 - AluSc SINE Alu -2 307 1 2239 103 3 0 chr17 33019398 33019689 -56484864 - AluSg SINE Alu -18 292 1 1225 117 0 0 chr17 33019820 33019982 -56484571 + AluSp SINE Alu 136 297 -16 25 0 0 0 chr17 33020129 33020154 -56484399 + AT_rich Low_complexity Low_complexity 1 25 0 1765 91 53 4 chr17 33021378 33021621 -56482932 - AluSg SINE Alu -55 255 1 2053 122 3 59 chr17 33021888 33022208 -56482345 + AluSg SINE Alu 1 302 -8 1282 80 6 6 chr17 33022354 33022517 -56482036 + AluY SINE Alu 1 163 -148 388 91 0 0 chr17 33022527 33022582 -56481971 + AluSc SINE Alu 244 298 -1 1483 198 51 0 chr17 33022587 33022860 -56481693 + AluJo SINE Alu 3 289 -23 1284 185 54 64 chr17 33022872 33023170 -56481383 + AluJo SINE Alu 1 295 -17 1594 134 87 32 chr17 33023242 33023519 -56481034 - AluJo SINE Alu -20 292 1 1621 151 4 37 chr17 33023997 33024130 -56480423 - AluSx SINE Alu -44 268 147 2257 91 0 23 chr17 33024130 33024439 -56480114 - AluSp SINE Alu -11 302 1 1621 151 4 37 chr17 33024439 33024577 -56479976 - AluSx SINE Alu -165 147 6 648 227 0 0 chr17 33024741 33024873 -56479680 + FLAM_A SINE Alu 2 133 0 784 214 56 31 chr17 33024894 33025090 -56479463 - AluSg/x SINE Alu 0 312 112 1913 157 7 0 chr17 33025333 33025632 -56478921 + AluSx SINE Alu 1 301 -11 1031 149 0 44 chr17 33025632 33025813 -56478740 + AluSg/x SINE Alu 134 306 -6 2192 107 13 19 chr17 33026408 33026717 -56477836 - AluSp SINE Alu -6 307 1 726 176 15 8 chr17 33026822 33026953 -56477600 + FLAM_A SINE Alu 1 132 -1 373 287 0 43 chr17 33026978 33026989 -56477564 - L1MC4 LINE L1 -1319 6723 6713 2014 142 0 3 chr17 33026989 33027277 -56477276 + AluSx SINE Alu 1 287 -25 373 287 0 43 chr17 33027277 33027380 -56477173 - L1MC4 LINE L1 -1329 6713 6614 1721 170 10 14 chr17 33027409 33027697 -56476856 - AluJo SINE Alu -25 287 1 757 204 0 54 chr17 33027722 33027889 -56476664 + FRAM SINE Alu 2 159 -17 28 0 0 0 chr17 33028085 33028113 -56476440 + AT_rich Low_complexity Low_complexity 1 28 0 1757 144 65 0 chr17 33028927 33029205 -56475348 + AluJb SINE Alu 1 296 -16 1943 84 28 4 chr17 33029235 33029484 -56475069 + AluY SINE Alu 2 256 -55 22 35 0 0 chr17 33030421 33030450 -56474103 + AT_rich Low_complexity Low_complexity 1 29 0 590 260 242 11 chr17 33031799 33032076 -56472477 - L2 LINE L2 0 3313 2973 875 215 0 0 chr17 33032107 33032251 -56472302 + FRAM SINE Alu 1 144 -32 2064 120 3 7 chr17 33032251 33032550 -56472003 - AluY SINE Alu -8 303 6 2348 93 0 3 chr17 33032586 33032887 -56471666 + AluSg SINE Alu 1 300 -10 216 61 30 0 chr17 33033169 33033202 -56471351 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 2151 103 7 0 chr17 33033202 33033484 -56471069 - AluSx SINE Alu -28 284 1 2007 223 109 110 chr17 33033786 33033805 -56470748 - L1MC4 LINE L1 -3 8039 8021 2591 59 7 0 chr17 33033805 33034110 -56470443 + AluSc SINE Alu 3 309 0 2007 223 109 110 chr17 33034110 33034938 -56469615 - L1MC4 LINE L1 -21 8021 7194 226 132 0 0 chr17 33034938 33034976 -56469577 + HY3 scRNA scRNA 63 100 -1 2007 223 109 110 chr17 33034976 33034997 -56469556 - L1MC4 LINE L1 -848 7194 7174 261 0 0 0 chr17 33034997 33035026 -56469527 + (GA)n Simple_repeat Simple_repeat 2 30 0 810 194 0 0 chr17 33035032 33035161 -56469392 + AluJo SINE Alu 4 132 -170 2007 223 109 110 chr17 33035161 33035417 -56469136 - L1MC4 LINE L1 -873 7169 6868 2339 89 7 0 chr17 33035417 33035721 -56468832 - AluSp SINE Alu -7 306 1 2007 223 109 110 chr17 33035721 33035829 -56468724 - L1MC4 LINE L1 -1174 6868 6761 856 189 44 6 chr17 33035858 33036017 -56468536 + AluJo SINE Alu 137 301 -1 626 249 127 0 chr17 33036229 33036450 -56468103 + L1MC/D LINE L1 5295 5543 -2265 238 226 0 0 chr17 33036477 33036530 -56468023 + L1MC/D LINE L1 5779 5831 -1977 775 234 88 9 chr17 33036691 33036918 -56467635 + MIR SINE MIR 18 262 0 191 147 29 0 chr17 33037137 33037171 -56467382 - L2 LINE L2 -15 3298 3264 2154 113 3 10 chr17 33037348 33037649 -56466904 + AluSg SINE Alu 1 299 -11 2201 107 0 16 chr17 33038236 33038545 -56466008 - AluSg SINE Alu -6 304 1 640 179 232 21 chr17 33038561 33038751 -56465802 + MIR SINE MIR 30 259 -3 264 300 96 53 chr17 33039590 33039840 -56464713 + L1ME4a LINE L1 5290 5560 -561 1884 157 3 13 chr17 33039840 33040145 -56464408 + AluSx SINE Alu 1 302 -10 264 300 96 53 chr17 33040145 33040230 -56464323 + L1ME4a LINE L1 5560 5640 -481 226 266 38 13 chr17 33040422 33040501 -56464052 + L1ME4a LINE L1 5989 6069 -52 2336 113 0 0 chr17 33040610 33040920 -56463633 - AluSg SINE Alu 0 310 1 1689 141 98 4 chr17 33040926 33041202 -56463351 - AluSx SINE Alu -10 302 1 207 0 0 0 chr17 33041287 33041310 -56463243 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2140 92 7 4 chr17 33041505 33041820 -56462733 - AluSg SINE Alu 0 316 1 438 299 68 18 chr17 33042110 33042388 -56462165 - L2 LINE L2 -836 2478 2187 609 287 81 39 chr17 33042558 33042616 -56461937 + MER102a DNA MER1_type 1 55 -1362 2208 102 0 26 chr17 33042616 33042919 -56461634 + AluSq SINE Alu 1 295 -18 609 287 81 39 chr17 33042919 33043167 -56461386 + MER102a DNA MER1_type 55 320 -10 1681 133 21 107 chr17 33043558 33043757 -56460796 - AluYb8 SINE Alu -9 309 149 2157 91 17 10 chr17 33043757 33044053 -56460500 + AluY SINE Alu 1 298 -13 1681 133 21 107 chr17 33044053 33044191 -56460362 - AluYb8 SINE Alu -169 149 1 352 232 20 50 chr17 33044422 33044521 -56460032 - MER46C DNA MER2_type -218 120 25 2308 85 0 52 chr17 33044554 33044882 -56459671 - AluY SINE Alu 0 311 1 2251 90 0 47 chr17 33044927 33045248 -56459305 - AluY SINE Alu -3 308 3 922 97 0 8 chr17 33045255 33045379 -56459174 - AluY SINE Alu -179 132 10 1875 129 0 4 chr17 33045379 33045642 -56458911 - AluSx SINE Alu -50 262 1 1701 185 7 3 chr17 33045721 33046024 -56458529 - AluJb SINE Alu -8 304 1 872 126 7 15 chr17 33046207 33046342 -56458211 + AluJo SINE Alu 1 134 -178 2070 126 18 0 chr17 33046593 33046879 -56457674 - AluSx SINE Alu -21 291 1 1987 132 14 3 chr17 33046989 33047285 -56457268 + AluSq SINE Alu 1 299 -14 2397 93 0 3 chr17 33047377 33047689 -56456864 - AluY SINE Alu 0 311 1 1979 116 17 7 chr17 33047692 33047984 -56456569 - AluSq SINE Alu -18 295 1 1575 161 30 39 chr17 33048393 33048698 -56455855 - AluSx SINE Alu -4 308 7 352 103 52 0 chr17 33049017 33049075 -56455478 + L1MA2 LINE L1 6240 6300 -4 709 167 0 0 chr17 33049982 33050102 -56454451 + AluSp/q SINE Alu 190 309 -4 1881 147 20 3 chr17 33050911 33051203 -56453350 + AluSx SINE Alu 1 297 -15 1954 138 0 14 chr17 33051314 33051597 -56452956 + AluSx SINE Alu 4 282 -30 23 0 0 0 chr17 33051601 33051624 -56452929 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr17 33051868 33051894 -56452659 + AT_rich Low_complexity Low_complexity 1 26 0 22 80 0 0 chr17 33052049 33052099 -56452454 + AT_rich Low_complexity Low_complexity 1 50 0 2114 142 0 10 chr17 33052359 33052669 -56451884 + AluSx SINE Alu 1 307 -5 713 203 0 0 chr17 33052942 33053060 -56451493 + AluJb SINE Alu 6 123 -189 2298 91 0 0 chr17 33053060 33053346 -56451207 - AluY SINE Alu -9 302 17 21 36 0 0 chr17 33055615 33055643 -56448910 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 33056202 33056223 -56448330 + AT_rich Low_complexity Low_complexity 1 21 0 3389 177 105 11 chr17 33056383 33057128 -56447425 + L1MC3 LINE L1 6971 7785 0 1853 180 45 3 chr17 33057338 33057672 -56446881 + MER7A DNA MER2_type 1 346 0 2492 66 0 10 chr17 33057697 33058002 -56446551 + AluY SINE Alu 1 302 -9 1989 103 34 17 chr17 33058625 33058917 -56445636 - AluSc SINE Alu -12 297 1 1077 165 0 0 chr17 33058946 33059104 -56445449 - FRAM SINE Alu -25 151 1 357 226 68 68 chr17 33059527 33059717 -56444836 + MIR SINE MIR 73 262 0 1139 161 109 5 chr17 33059821 33060032 -56444521 + MER46A DNA MER2_type 3 235 -1 2007 136 4 0 chr17 33060207 33060486 -56444067 - AluSx SINE Alu -32 280 1 1639 157 34 0 chr17 33060854 33061116 -56443437 + AluJb SINE Alu 27 297 -15 576 269 166 30 chr17 33061288 33061626 -56442927 - L2 LINE L2 -5 3308 2925 981 198 0 12 chr17 33061715 33061882 -56442671 + AluJb SINE Alu 138 302 -10 1958 84 4 8 chr17 33061891 33062141 -56442412 + AluSg SINE Alu 1 249 -61 1766 163 3 0 chr17 33062302 33062610 -56441943 + AluY SINE Alu 1 309 0 621 245 148 9 chr17 33062629 33062845 -56441708 + MIR SINE MIR 7 252 -10 878 212 65 0 chr17 33063018 33063202 -56441351 + Charlie4 DNA MER1_type 1 196 -1765 670 98 0 0 chr17 33063204 33063296 -56441257 + AluSg/x SINE Alu 203 294 -16 194 196 0 43 chr17 33063691 33063737 -56440816 - MIR3 SINE MIR -17 191 148 1592 73 0 0 chr17 33063825 33064017 -56440536 + AluY SINE Alu 1 192 -119 28 0 0 0 chr17 33064313 33064341 -56440212 + GC_rich Low_complexity Low_complexity 1 28 0 37 52 0 0 chr17 33064475 33064533 -56440020 + GC_rich Low_complexity Low_complexity 1 58 0 1756 173 51 110 chr17 33065466 33065909 -56438644 - L1ME LINE L1 -387 5779 5311 1662 164 7 43 chr17 33065909 33066214 -56438339 - AluJo SINE Alu -18 294 1 1756 173 51 110 chr17 33066214 33066269 -56438284 - L1ME LINE L1 -855 5311 5254 1868 142 6 47 chr17 33066269 33066587 -56437966 - AluJo SINE Alu -7 305 1 1756 173 51 110 chr17 33066587 33066811 -56437742 - L1ME LINE L1 -912 5254 5073 816 163 129 43 chr17 33066819 33067028 -56437525 - MER58B DNA MER1_type -10 331 105 2619 123 30 88 chr17 33067168 33067641 -56436912 - L1MA4 LINE L1 -27 6273 5833 2368 88 0 0 chr17 33067641 33067936 -56436617 - AluSg SINE Alu -15 295 1 2619 123 30 88 chr17 33067936 33067998 -56436555 - L1MA4 LINE L1 -467 5833 5769 761 167 8 30 chr17 33068003 33068135 -56436418 - FLAM_C SINE Alu 0 133 5 2253 105 3 0 chr17 33068144 33068438 -56436115 - AluSx SINE Alu -17 295 1 1940 241 36 12 chr17 33068461 33069051 -56435502 - L1M4 LINE L1 -3170 2976 2373 2000 142 3 0 chr17 33069076 33069364 -56435189 + AluSx SINE Alu 1 289 -23 2141 125 3 0 chr17 33069376 33069681 -56434872 + AluSx SINE Alu 1 306 -6 1760 140 39 7 chr17 33069921 33070200 -56434353 - AluSx SINE Alu -24 288 1 1774 135 50 0 chr17 33070209 33070469 -56434084 - AluSx SINE Alu -23 289 17 503 164 64 108 chr17 33070488 33070744 -56433809 - L1MC/D LINE L1 -694 5472 5206 2164 98 28 0 chr17 33070744 33070866 -56433687 + AluY SINE Alu 1 118 -193 228 35 0 0 chr17 33070866 33070895 -56433658 + (CA)n Simple_repeat Simple_repeat 2 30 0 2164 98 28 0 chr17 33070895 33071059 -56433494 + AluY SINE Alu 118 295 -16 503 164 64 108 chr17 33071059 33071096 -56433457 - L1MC/D LINE L1 -960 5206 5169 1845 156 9 19 chr17 33071096 33071411 -56433142 + AluJb SINE Alu 1 312 0 503 164 64 108 chr17 33071411 33071493 -56433060 - L1MC/D LINE L1 -997 5169 5085 2154 138 0 3 chr17 33071493 33071804 -56432749 + AluSx SINE Alu 1 310 -2 503 164 64 108 chr17 33071804 33072034 -56432519 - L1MC/D LINE L1 -1081 5085 4964 778 185 0 0 chr17 33072064 33072194 -56432359 - FLAM_C SINE Alu -12 131 2 911 169 0 0 chr17 33072250 33072398 -56432155 + AluJb SINE Alu 138 285 -27 792 79 22 0 chr17 33072398 33072537 -56432016 + (TA)n Simple_repeat Simple_repeat 2 143 0 933 255 85 17 chr17 33075759 33076112 -56428441 + L1MC4 LINE L1 7623 7999 -43 1950 139 4 0 chr17 33076207 33076488 -56428065 + AluJb SINE Alu 14 295 -17 675 229 193 0 chr17 33076822 33077040 -56427513 - MIR SINE MIR -1 261 2 1582 220 155 29 chr17 33077211 33077514 -56427039 - L1MC4 LINE L1 -371 7671 7408 1658 169 13 46 chr17 33077514 33077821 -56426732 + AluJb SINE Alu 2 298 -14 1582 220 155 29 chr17 33077821 33078149 -56426404 - L1MC4 LINE L1 -634 7408 6960 26 50 0 0 chr17 33078767 33078807 -56425746 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 33079141 33079163 -56425390 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 246 62 0 0 chr17 33079501 33079533 -56425020 + (T)n Simple_repeat Simple_repeat 1 32 0 2096 143 0 3 chr17 33082499 33082807 -56421746 + AluJb SINE Alu 1 307 -5 240 149 0 0 chr17 33082868 33082915 -56421638 + (T)n Simple_repeat Simple_repeat 1 47 0 2323 113 0 0 chr17 33084114 33084425 -56420128 + AluY SINE Alu 1 311 0 826 127 0 0 chr17 33084510 33084620 -56419933 + AluJb SINE Alu 178 287 -25 622 281 51 68 chr17 33084631 33085098 -56419455 - L1M4 LINE L1 -1529 4617 4159 1071 177 91 10 chr17 33085099 33085308 -56419245 - AluJo SINE Alu -5 307 82 510 225 70 80 chr17 33085534 33085610 -56418943 - MER2 DNA MER2_type -134 211 136 1277 190 145 22 chr17 33085610 33085879 -56418674 + AluJo SINE Alu 1 302 0 510 225 70 80 chr17 33085879 33086015 -56418538 - MER2 DNA MER2_type -209 136 1 1406 147 8 144 chr17 33086547 33086908 -56417645 + AluJb SINE Alu 1 312 0 817 189 0 20 chr17 33086908 33087056 -56417497 - FRAM SINE Alu -21 155 11 1998 156 3 0 chr17 33087068 33087363 -56417190 - AluJb SINE Alu -16 296 1 204 40 0 0 chr17 33087450 33087475 -56417078 + (GA)n Simple_repeat Simple_repeat 2 26 0 333 0 0 0 chr17 33087562 33087599 -56416954 + (TG)n Simple_repeat Simple_repeat 2 38 0 1235 166 41 68 chr17 33087637 33087932 -56416621 - L1MB7 LINE L1 -16 6168 5882 1874 154 14 7 chr17 33088005 33088291 -56416262 - AluJb SINE Alu -24 288 1 2528 170 44 2 chr17 33088294 33088771 -56415782 - L1MB3 LINE L1 -44 6139 5643 1903 94 0 0 chr17 33088773 33089008 -56415545 - AluSq SINE Alu -78 235 1 455 198 0 78 chr17 33089067 33089183 -56415370 - AluJb SINE Alu -119 193 87 425 275 52 2 chr17 33089222 33089462 -56415091 + MLT1J2 LTR MaLR 125 419 -31 497 258 106 71 chr17 33089513 33089528 -56415025 - MIR SINE MIR -57 205 192 1562 153 122 16 chr17 33089528 33089783 -56414770 - AluJo SINE Alu -30 282 1 497 258 106 71 chr17 33089783 33089839 -56414714 - MIR SINE MIR -70 192 139 1662 125 0 89 chr17 33089839 33090119 -56414434 - AluSx SINE Alu -21 291 37 497 258 106 71 chr17 33090119 33090244 -56414309 - MIR SINE MIR -123 139 1 225 234 16 47 chr17 33090457 33090521 -56414032 + MIR SINE MIR 201 262 0 823 211 93 35 chr17 33090540 33090743 -56413810 + MIR SINE MIR 10 229 -33 21 0 0 0 chr17 33091240 33091261 -56413292 + AT_rich Low_complexity Low_complexity 1 21 0 815 93 0 126 chr17 33091714 33091865 -56412688 + FLAM_C SINE Alu 1 132 -1 2317 118 0 6 chr17 33091957 33092271 -56412282 + AluSx SINE Alu 1 312 0 637 287 29 8 chr17 33092420 33092664 -56411889 - L2 LINE L2 -258 3055 2807 2248 100 13 7 chr17 33092667 33092977 -56411576 + AluSx SINE Alu 1 312 0 2118 124 10 13 chr17 33093213 33093520 -56411033 + AluSx SINE Alu 1 306 -6 909 229 68 16 chr17 33093727 33093976 -56410577 - MLT1H LTR MaLR -259 290 29 2523 45 3 0 chr17 33094102 33094394 -56410159 - AluY SINE Alu -18 293 1 189 0 0 0 chr17 33095391 33095412 -56409141 + (T)n Simple_repeat Simple_repeat 1 21 0 408 55 0 0 chr17 33095819 33095874 -56408679 + (GA)n Simple_repeat Simple_repeat 1 55 0 780 203 15 40 chr17 33096287 33096346 -56408207 - LTR26E LTR ERV1 -423 199 140 2345 90 3 0 chr17 33096346 33096646 -56407907 - AluSp SINE Alu -10 303 3 780 203 15 40 chr17 33096646 33096788 -56407765 - LTR26E LTR ERV1 -482 140 3 790 238 198 9 chr17 33096791 33097140 -56407413 + MLT1D LTR MaLR 82 496 -9 772 141 0 25 chr17 33097241 33097362 -56407191 - AluSg/x SINE Alu -11 299 182 1721 114 23 46 chr17 33097362 33097624 -56406929 + AluSx SINE Alu 44 299 -13 1183 67 0 0 chr17 33097624 33097758 -56406795 + AluSg SINE Alu 1 134 -176 2267 89 3 17 chr17 33097758 33098050 -56406503 + AluY SINE Alu 1 288 -23 3126 152 47 47 chr17 33098055 33098515 -56406038 + L1MA7 LINE L1 5635 6094 -197 2391 104 0 0 chr17 33098515 33098824 -56405729 - AluSg1 SINE Alu 0 309 1 3126 152 47 47 chr17 33098824 33098880 -56405673 + L1MA7 LINE L1 6094 6149 -142 725 181 16 8 chr17 33098880 33099007 -56405546 + FLAM_C SINE Alu 1 128 -5 3126 152 47 47 chr17 33099007 33099146 -56405407 + L1MA7 LINE L1 6148 6291 0 2016 133 25 0 chr17 33099155 33099441 -56405112 + AluSx SINE Alu 4 296 -16 1989 121 66 0 chr17 33099443 33099732 -56404821 + AluSg SINE Alu 1 308 -2 316 113 48 0 chr17 33099732 33099794 -56404759 + GA-rich Low_complexity Low_complexity 1 65 0 2384 61 0 51 chr17 33099794 33100107 -56404446 + AluY SINE Alu 1 297 -14 2143 133 0 3 chr17 33100558 33100851 -56403702 + AluSx SINE Alu 1 292 -20 538 170 259 0 chr17 33100862 33100974 -56403579 + AluJo SINE Alu 3 143 -169 331 260 34 62 chr17 33100974 33101020 -56403533 - MLT1G1 LTR MaLR -451 144 98 2216 125 152 11 chr17 33101020 33101395 -56403158 + MSTA LTR MaLR 1 428 0 331 260 34 62 chr17 33101395 33101494 -56403059 - MLT1G1 LTR MaLR -497 98 3 493 221 0 33 chr17 33101494 33101616 -56402937 + LTR16C LTR ERVL 374 491 0 2187 122 28 73 chr17 33101786 33101817 -56402736 - MSTA LTR MaLR -20 408 377 2225 110 0 0 chr17 33101817 33102147 -56402406 - AluSx SINE Alu 0 330 1 2187 122 28 73 chr17 33102147 33102363 -56402190 - MSTA LTR MaLR -51 377 184 2178 131 0 7 chr17 33102363 33102669 -56401884 + AluSx SINE Alu 1 304 -8 2187 122 28 73 chr17 33102669 33102846 -56401707 - MSTA LTR MaLR -244 184 1 29 28 0 0 chr17 33102853 33102889 -56401664 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 0 7 chr17 33102943 33103237 -56401316 + AluY SINE Alu 1 292 -19 275 271 43 0 chr17 33103502 33103572 -56400981 + MIR SINE MIR 118 190 -72 717 144 0 32 chr17 33103575 33103700 -56400853 - FLAM_C SINE Alu 0 143 23 2153 118 22 35 chr17 33103732 33103867 -56400686 + AluSq SINE Alu 2 137 -176 2512 67 0 10 chr17 33103867 33104180 -56400373 + AluY SINE Alu 1 310 -1 2153 118 22 35 chr17 33104180 33104357 -56400196 + AluSq SINE Alu 137 310 -3 417 304 24 8 chr17 33104360 33104485 -56400068 - MIR SINE MIR -13 249 123 1881 176 0 25 chr17 33105277 33105596 -56398957 - AluJo SINE Alu 0 312 2 1965 141 0 46 chr17 33105600 33105781 -56398772 - AluSx SINE Alu 0 312 151 2115 114 21 3 chr17 33105781 33106071 -56398482 - AluSg SINE Alu -15 295 1 1965 141 0 46 chr17 33106071 33106216 -56398337 - AluSx SINE Alu -161 151 1 781 191 0 22 chr17 33106228 33106364 -56398189 - FLAM_A SINE Alu 0 133 1 1415 234 117 5 chr17 33106390 33106835 -56397718 - L1ME3 LINE L1 -24 6138 5644 1608 175 25 7 chr17 33106836 33107110 -56397443 - AluJo SINE Alu -32 280 2 255 299 45 0 chr17 33107192 33107259 -56397294 - L2 LINE L2 0 3313 3244 556 133 0 0 chr17 33107282 33107357 -56397196 + AluS SINE Alu 2 76 -237 2183 112 6 22 chr17 33107466 33107778 -56396775 - AluSx SINE Alu -5 307 1 568 109 0 11 chr17 33107805 33107897 -56396656 - FLAM_A SINE Alu -10 132 42 368 199 56 12 chr17 33107910 33108014 -56396539 - MIR SINE MIR -69 139 45 230 301 7 37 chr17 33108536 33108672 -56395881 + GA-rich Low_complexity Low_complexity 4 135 0 200 108 0 27 chr17 33109297 33109334 -56395219 + (GGGA)n Simple_repeat Simple_repeat 4 39 0 245 288 0 54 chr17 33109337 33109448 -56395105 + G-rich Low_complexity Low_complexity 2 106 0 183 255 59 0 chr17 33110311 33110362 -56394191 - MER5C DNA MER1_type -184 140 87 2340 83 0 0 chr17 33110559 33110882 -56393671 - AluY SINE Alu 0 323 1 197 314 73 66 chr17 33110886 33111023 -56393530 - L2 LINE L2 0 3313 3176 565 258 23 0 chr17 33111390 33111518 -56393035 - MER5A DNA MER1_type -22 167 37 1086 208 33 0 chr17 33112503 33112715 -56391838 + MER20 DNA MER1_type 1 219 0 212 361 0 12 chr17 33113129 33113212 -56391341 - MIR SINE MIR -89 173 92 984 125 13 13 chr17 33113305 33113457 -56391096 + AluSx SINE Alu 2 153 -159 1704 115 58 0 chr17 33113579 33113822 -56390731 + AluSq SINE Alu 1 257 -56 717 64 0 21 chr17 33113827 33113921 -56390632 - AluS SINE Alu -219 93 2 667 212 0 29 chr17 33113978 33114115 -56390438 - FLAM_A SINE Alu 0 133 1 670 250 21 0 chr17 33114118 33114262 -56390291 - MIR SINE MIR -98 164 18 2047 128 21 3 chr17 33114328 33114618 -56389935 + AluSx SINE Alu 1 295 -17 2622 52 0 0 chr17 33114618 33114923 -56389630 + AluY SINE Alu 1 305 -6 2228 89 51 0 chr17 33114923 33115216 -56389337 + AluSx SINE Alu 1 308 -4 229 307 11 11 chr17 33115216 33115304 -56389249 - L2 LINE L2 -320 2952 2865 424 304 87 7 chr17 33115365 33115503 -56389050 - MIR SINE MIR -80 182 34 876 65 9 0 chr17 33116772 33116879 -56387674 + AluSg/x SINE Alu 193 300 -12 401 272 117 61 chr17 33117037 33117121 -56387432 - MIR SINE MIR -26 236 158 2265 115 0 0 chr17 33117121 33117416 -56387137 - AluSx SINE Alu -17 295 1 401 272 117 61 chr17 33117416 33117511 -56387042 - MIR SINE MIR -104 158 47 2184 113 0 0 chr17 33118215 33118507 -56386046 - AluSx SINE Alu -20 292 1 1182 232 221 17 chr17 33118755 33119230 -56385323 - MLT1E2 LTR MaLR 0 626 55 1005 258 53 71 chr17 33119591 33119817 -56384736 + L2 LINE L2 2872 3101 -212 2087 120 3 0 chr17 33119817 33120100 -56384453 - AluSx SINE Alu -13 299 16 1005 258 53 71 chr17 33120100 33120301 -56384252 + L2 LINE L2 3101 3293 -20 1852 150 17 3 chr17 33120301 33120594 -56383959 + AluSx SINE Alu 1 297 -15 1005 258 53 71 chr17 33120594 33120615 -56383938 + L2 LINE L2 3293 3313 0 2271 98 7 0 chr17 33121224 33121521 -56383032 - AluSq SINE Alu -14 299 1 1847 172 0 13 chr17 33121524 33121826 -56382727 - AluJb SINE Alu -14 298 1 1090 125 39 149 chr17 33121851 33121990 -56382563 - LTR26E LTR ERV1 0 549 564 2194 123 7 16 chr17 33121990 33122300 -56382253 + AluSx SINE Alu 5 311 -1 1090 125 39 149 chr17 33122300 33122585 -56381968 - LTR26E LTR ERV1 16 565 250 2319 101 7 0 chr17 33122585 33122883 -56381670 + AluSx SINE Alu 1 300 -12 939 145 7 13 chr17 33122983 33123135 -56381418 + AluSg/x SINE Alu 160 310 -2 2373 116 0 6 chr17 33123352 33123663 -56380890 - AluSc SINE Alu 0 309 1 226 302 0 69 chr17 33124639 33124755 -56379798 - MIR SINE MIR -50 212 105 571 236 82 48 chr17 33124827 33125035 -56379518 + MIR SINE MIR 37 251 -11 2367 98 0 0 chr17 33125177 33125482 -56379071 - AluSx SINE Alu -7 305 1 574 292 47 43 chr17 33125577 33125854 -56378699 + L2 LINE L2 2820 3097 -216 2111 147 0 3 chr17 33125908 33126221 -56378332 - AluSx SINE Alu 0 312 1 2109 137 7 0 chr17 33127874 33128167 -56376386 + AluSx SINE Alu 1 295 -17 388 273 59 51 chr17 33128788 33128950 -56375603 - MIR SINE MIR -66 142 17 938 199 12 6 chr17 33129162 33129328 -56375225 + FRAM SINE Alu 6 172 -4 27 49 0 0 chr17 33129409 33129450 -56375103 + AT_rich Low_complexity Low_complexity 1 41 0 1877 171 0 13 chr17 33129451 33129750 -56374803 + AluJb SINE Alu 1 295 -17 2746 19 7 3 chr17 33129973 33130281 -56374272 + AluY SINE Alu 1 309 -2 2042 136 0 0 chr17 33133013 33133293 -56371260 - AluSq SINE Alu -33 280 1 21 0 0 0 chr17 33133343 33133364 -56371189 + AT_rich Low_complexity Low_complexity 1 21 0 939 136 0 0 chr17 33133365 33133497 -56371056 - FLAM_C SINE Alu -1 132 1 1536 159 82 0 chr17 33133818 33134088 -56370465 + AluJb SINE Alu 1 292 -20 1473 137 171 23 chr17 33134493 33134756 -56369797 + AluSx SINE Alu 1 302 0 954 161 0 0 chr17 33134756 33134927 -56369626 + AluSg/x SINE Alu 132 300 0 211 348 186 0 chr17 33135158 33135411 -56369142 - L2 LINE L2 -1075 2239 1940 2011 138 0 0 chr17 33135482 33135786 -56368767 - AluSx SINE Alu 0 312 9 515 272 75 0 chr17 33135804 33135951 -56368602 - Charlie8 DNA MER1_type -2259 158 1 427 194 65 0 chr17 33136382 33136475 -56368078 - MER113 DNA MER1_type? -62 459 361 880 139 0 0 chr17 33136476 33136605 -56367948 + FLAM_C SINE Alu 1 129 -4 356 207 62 110 chr17 33136627 33136682 -56367871 - MER113 DNA MER1_type? -148 373 317 2000 92 46 0 chr17 33136682 33136963 -56367590 - AluSg SINE Alu -16 294 1 929 213 0 6 chr17 33136966 33137135 -56367418 - FAM SINE Alu -6 169 2 356 207 62 110 chr17 33137135 33137220 -56367333 - MER113 DNA MER1_type? -206 315 236 1023 145 57 0 chr17 33137433 33137626 -56366927 - L1MB3 LINE L1 -1 6182 5979 263 290 84 37 chr17 33137667 33137774 -56366779 + MIR SINE MIR 107 218 -44 460 295 93 16 chr17 33138398 33138591 -56365962 + L3 LINE CR1 885 1092 -485 380 317 72 19 chr17 33138632 33138840 -56365713 - MIR SINE MIR -24 238 20 837 228 73 10 chr17 33139236 33139442 -56365111 + MIR SINE MIR 14 232 -30 1988 116 0 3 chr17 33139473 33139790 -56364763 + AluSx SINE Alu 1 316 0 245 302 94 0 chr17 33139827 33139923 -56364630 + L2 LINE L2 3132 3236 -36 1700 258 111 15 chr17 33139932 33140474 -56364079 + MLT1G1 LTR MaLR 1 594 -1 1783 222 44 17 chr17 33141009 33141484 -56363069 + MER69 DNA AcHobo 1 518 -2008 1006 109 0 0 chr17 33141543 33141680 -56362873 + AluSq/x SINE Alu 1 137 -176 1981 127 0 13 chr17 33141680 33141979 -56362574 + AluSq SINE Alu 1 295 -18 29 0 0 0 chr17 33141979 33142008 -56362545 + AT_rich Low_complexity Low_complexity 1 29 0 436 230 11 0 chr17 33142207 33142294 -56362259 - L2 LINE L2 -1 3271 3184 312 160 0 20 chr17 33142558 33142608 -56361945 - Alu SINE Alu -250 52 4 2206 92 3 0 chr17 33142634 33142926 -56361627 + AluSq SINE Alu 1 293 -20 1195 205 40 78 chr17 33143077 33143448 -56361105 + MSTD LTR MaLR 1 357 -39 642 243 10 15 chr17 33143540 33143746 -56360807 - L1ME LINE L1 -703 5463 5259 456 196 45 9 chr17 33143792 33143904 -56360649 - L1ME LINE L1 -885 5261 5146 21 57 0 0 chr17 33143920 33143955 -56360598 + AT_rich Low_complexity Low_complexity 1 35 0 2810 156 17 125 chr17 33143977 33144151 -56360402 - LTR34 LTR ERV1 -2 697 506 2224 88 3 0 chr17 33144151 33144445 -56360108 + AluSp SINE Alu 1 295 -18 2810 156 17 125 chr17 33144445 33145052 -56359501 - LTR34 LTR ERV1 -193 506 1 383 176 0 0 chr17 33145364 33145432 -56359121 + AluJ/FLAM SINE Alu 1 68 -234 1511 147 32 29 chr17 33145464 33145763 -56358790 + AluJb SINE Alu 3 302 0 267 178 0 22 chr17 33145983 33146028 -56358525 + Alu SINE Alu 1 44 -256 653 262 41 22 chr17 33146102 33146373 -56358180 + L1M4 LINE L1 4204 4479 -1667 1901 146 3 3 chr17 33147186 33147487 -56357066 - AluJb SINE Alu -11 301 1 277 186 29 0 chr17 33147517 33147579 -56356974 - MER69 DNA AcHobo -6 2520 2454 1649 164 41 0 chr17 33147579 33147872 -56356681 - AluJb SINE Alu -7 305 1 228 234 78 13 chr17 33148066 33148143 -56356410 - L2 LINE L2 -21 3251 3170 831 232 0 0 chr17 33148245 33148409 -56356144 + MIR SINE MIR 79 242 -20 189 213 0 0 chr17 33148553 33148600 -56355953 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 383 41 13 chr17 33148715 33149031 -56355522 - L2 LINE L2 -424 2890 2566 2053 117 0 3 chr17 33149243 33149542 -56355011 - AluSq SINE Alu -15 298 1 947 111 0 7 chr17 33149652 33149787 -56354766 + AluJb SINE Alu 1 134 -178 1412 182 78 4 chr17 33150254 33150617 -56353936 + AluJb SINE Alu 2 302 0 241 333 30 0 chr17 33150745 33150844 -56353709 - MER113 DNA MER1_type? -417 104 3 269 176 14 68 chr17 33150847 33150921 -56353632 - MIR3 SINE MIR -49 159 90 1174 223 56 75 chr17 33150927 33151394 -56353159 - MLT1J LTR MaLR 0 511 54 636 162 45 78 chr17 33151394 33151463 -56353090 - MER69 DNA AcHobo -3 2523 2453 2292 60 10 10 chr17 33151463 33151762 -56352791 + AluY SINE Alu 1 299 -12 636 162 45 78 chr17 33151762 33151871 -56352682 - MER69 DNA AcHobo -73 2453 2351 1652 115 108 26 chr17 33152027 33152296 -56352257 + AluSx SINE Alu 1 291 -21 2167 71 39 0 chr17 33152300 33152583 -56351970 + AluSq SINE Alu 1 294 -19 1971 134 10 3 chr17 33152584 33152891 -56351662 + AluSx SINE Alu 1 309 -3 180 0 0 0 chr17 33153314 33153334 -56351219 + (TA)n Simple_repeat Simple_repeat 2 21 0 877 212 102 33 chr17 33153378 33153394 -56351159 - MER21B LTR ERV1 -3 860 847 1922 151 0 0 chr17 33153394 33153692 -56350861 - AluJb SINE Alu -14 298 1 877 212 102 33 chr17 33153692 33153920 -56350633 - MER21B LTR ERV1 -16 847 599 * 1195 164 25 0 chr17 33153885 33154086 -56350467 - MER7A DNA MER2_type -141 205 2 785 238 29 0 chr17 33154099 33154271 -56350282 + MER8 DNA MER2_type 3 179 -60 312 232 0 0 chr17 33154254 33154310 -56350243 + MER2 DNA MER2_type 290 345 0 * 189 147 0 0 chr17 33154513 33154547 -56350006 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1468 96 51 135 chr17 33154573 33154885 -56349668 + AluJb SINE Alu 11 296 -16 8028 48 35 1 chr17 33154968 33155261 -56349292 - LTR13 LTR ERVK 0 1007 725 195 42 0 0 chr17 33155261 33155285 -56349268 + (GA)n Simple_repeat Simple_repeat 2 25 0 8028 48 35 1 chr17 33155285 33155965 -56348588 - LTR13 LTR ERVK -282 725 1 508 260 118 44 chr17 33156060 33156264 -56348289 - MIR SINE MIR -31 231 13 228 246 0 33 chr17 33157498 33157559 -56346994 - MIR SINE MIR -8 254 196 394 264 23 0 chr17 33157559 33157646 -56346907 + L1MC4 LINE L1 6614 6702 -1340 380 273 0 40 chr17 33157577 33157676 -56346877 - L1MC4 LINE L1 -1339 6703 6609 * 230 116 23 0 chr17 33157676 33157719 -56346834 + (TA)n Simple_repeat Simple_repeat 1 44 0 990 165 6 0 chr17 33157719 33157877 -56346676 - AluJb SINE Alu -21 291 133 2128 91 14 3 chr17 33157882 33158179 -56346374 - AluSq SINE Alu -13 300 1 732 251 61 0 chr17 33158187 33158350 -56346203 - MIR SINE MIR -62 200 28 1150 171 49 68 chr17 33158356 33158521 -56346032 - AluJo SINE Alu -9 303 143 2077 117 0 0 chr17 33158521 33158819 -56345734 - AluSx SINE Alu -7 305 8 1150 171 49 68 chr17 33158819 33158917 -56345636 - AluJo SINE Alu -169 143 45 2248 96 0 0 chr17 33159235 33159528 -56345025 - AluSx SINE Alu -19 293 1 1589 168 20 3 chr17 33159536 33159833 -56344720 - AluJo SINE Alu -10 302 1 333 320 78 0 chr17 33160220 33160348 -56344205 - MIR SINE MIR -61 201 64 * 374 322 103 35 chr17 33160321 33160495 -56344058 + MIR3 SINE MIR 23 208 0 2306 27 0 44 chr17 33160805 33161124 -56343429 + AluY SINE Alu 1 306 0 672 286 44 36 chr17 33161165 33161413 -56343140 - MIR SINE MIR 0 262 13 184 309 29 0 chr17 33162027 33162095 -56342458 - L2 LINE L2 -62 3251 3182 222 237 175 93 chr17 33162095 33162192 -56342361 + MIR3 SINE MIR 60 164 -44 440 62 0 15 chr17 33162342 33162407 -56342146 + (CCG)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr17 33162473 33162502 -56342051 + GC_rich Low_complexity Low_complexity 1 29 0 205 191 0 0 chr17 33163928 33163970 -56340583 + T-rich Low_complexity Low_complexity 2 43 0 374 130 0 14 chr17 33164103 33164172 -56340381 - Alu SINE Alu 0 301 234 1948 101 40 0 chr17 33164174 33164450 -56340103 + AluSx SINE Alu 4 290 -22 834 168 0 7 chr17 33164471 33164608 -56339945 + AluJo SINE Alu 1 136 -176 1738 161 0 20 chr17 33164610 33164908 -56339645 + AluJo SINE Alu 1 292 -20 1821 151 0 10 chr17 33164920 33165211 -56339342 + AluSx SINE Alu 1 288 -24 186 373 93 8 chr17 33165401 33165519 -56339034 + L2 LINE L2 2572 2699 -615 23 0 0 0 chr17 33165519 33165542 -56339011 + AT_rich Low_complexity Low_complexity 1 23 0 254 158 0 0 chr17 33165542 33165580 -56338973 - LTR56 LTR ERV1 -56 389 352 1726 170 0 3 chr17 33165638 33165927 -56338626 + AluJo SINE Alu 1 288 -24 296 258 97 32 chr17 33165936 33166060 -56338493 + L2 LINE L2 2739 2870 -444 546 226 62 14 chr17 33166103 33166249 -56338304 + L2 LINE L2 3161 3313 0 2160 62 3 49 chr17 33166325 33166662 -56337891 - AluY SINE Alu 0 311 1 1418 108 126 83 chr17 33166670 33166947 -56337606 - AluSx SINE Alu -23 289 1 2017 141 0 0 chr17 33166952 33167249 -56337304 - AluSx SINE Alu -15 297 1 604 161 11 0 chr17 33167274 33167367 -56337186 + FLAM_C SINE Alu 26 119 -24 2046 103 10 0 chr17 33167446 33167738 -56336815 + AluSg SINE Alu 1 295 -15 2326 80 0 3 chr17 33167892 33168194 -56336359 + AluY SINE Alu 5 305 -6 40 67 0 0 chr17 33169102 33169177 -56335376 + AT_rich Low_complexity Low_complexity 1 75 0 577 103 0 0 chr17 33169418 33169496 -56335057 + AluJ/FLAM SINE Alu 3 80 -232 189 0 0 0 chr17 33169496 33169517 -56335036 + (TA)n Simple_repeat Simple_repeat 2 22 0 243 170 0 0 chr17 33169994 33170041 -56334512 + (CATA)n Simple_repeat Simple_repeat 4 50 0 304 174 0 0 chr17 33170042 33170088 -56334465 - L1MC4 LINE L1 -1339 6703 6658 1801 129 4 11 chr17 33170098 33170376 -56334177 - AluSx SINE Alu -36 276 1 23 0 0 0 chr17 33170376 33170399 -56334154 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr17 33171284 33171309 -56333244 + (CTG)n Simple_repeat Simple_repeat 2 26 0 776 171 0 0 chr17 33171612 33171729 -56332824 + AluJb SINE Alu 158 274 -38 2303 82 0 3 chr17 33171926 33172232 -56332321 + AluSg SINE Alu 1 305 -5 323 228 40 20 chr17 33172819 33172920 -56331633 + MER50 LTR ERV1 502 604 -130 1803 177 7 0 chr17 33173122 33173427 -56331126 - AluJb SINE Alu -5 307 1 1680 171 3 3 chr17 33173703 33173996 -56330557 + AluJo SINE Alu 1 293 -19 879 159 0 0 chr17 33174347 33174479 -56330074 + FLAM_C SINE Alu 1 132 -1 1567 152 3 122 chr17 33174486 33174625 -56329928 + AluJb SINE Alu 1 155 -147 2277 74 0 23 chr17 33174625 33174935 -56329618 + AluY SINE Alu 1 303 -8 2016 112 3 7 chr17 33174942 33175236 -56329317 + AluSx SINE Alu 5 297 -15 1567 152 3 122 chr17 33175236 33175431 -56329122 + AluJb SINE Alu 161 302 0 2239 70 0 17 chr17 33175487 33175787 -56328766 - AluY SINE Alu -16 295 1 279 133 0 0 chr17 33175795 33175840 -56328713 + (T)n Simple_repeat Simple_repeat 1 45 0 1783 164 3 0 chr17 33175882 33176169 -56328384 - AluJb SINE Alu -24 288 1 426 175 38 0 chr17 33176169 33176249 -56328304 + Tigger5 DNA MER2_type 2241 2323 0 1762 140 0 47 chr17 33176598 33176898 -56327655 - AluJb SINE Alu -26 286 1 341 228 97 26 chr17 33177029 33177143 -56327410 - MIR SINE MIR -63 145 24 537 299 108 23 chr17 33177180 33177394 -56327159 - MIR SINE MIR -11 251 20 210 316 95 21 chr17 33177601 33177696 -56326857 - L2 LINE L2 -28 3244 3143 1767 122 22 11 chr17 33177857 33178127 -56326426 + AluSg SINE Alu 1 273 -37 1287 153 63 9 chr17 33178262 33178485 -56326068 - AluJb SINE Alu -77 235 1 236 119 0 0 chr17 33178752 33178794 -56325759 - Alu SINE Alu -2 300 259 2068 93 0 17 chr17 33178795 33179085 -56325468 - AluSc SINE Alu -24 285 1 7575 162 66 63 chr17 33179764 33181311 -56323242 + MER52A LTR ERV1 204 1755 0 1304 224 138 98 chr17 33181311 33181343 -56323210 - MER21B LTR ERV1 -159 704 675 2839 187 66 61 chr17 33181343 33182066 -56322487 - LTR8A LTR ERV1 0 727 1 1304 224 138 98 chr17 33182066 33182695 -56321858 - MER21B LTR ERV1 -188 675 17 22 56 0 0 chr17 33182717 33182753 -56321800 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr17 33183103 33183134 -56321419 + AT_rich Low_complexity Low_complexity 1 31 0 2188 113 3 3 chr17 33183777 33184087 -56320466 + AluSg SINE Alu 1 310 0 1958 73 0 0 chr17 33184202 33184447 -56320106 + AluSc SINE Alu 1 245 -64 1752 153 11 11 chr17 33184550 33184831 -56319722 + AluJb SINE Alu 11 291 -21 901 123 0 0 chr17 33184833 33184958 -56319595 + AluSx SINE Alu 1 122 -190 232 82 20 20 chr17 33184959 33185008 -56319545 + (CAAAA)n Simple_repeat Simple_repeat 4 52 0 2495 67 10 0 chr17 33185019 33185318 -56319235 + AluY SINE Alu 5 306 -5 1159 149 0 0 chr17 33185324 33185492 -56319061 + AluSx SINE Alu 128 295 -17 9086 95 40 62 chr17 33185756 33185859 -56318694 - Tigger1 DNA MER2_type 0 2418 2314 1952 156 0 10 chr17 33185859 33186161 -56318392 + AluSx SINE Alu 1 299 -13 9086 95 40 62 chr17 33186161 33187285 -56317268 - Tigger1 DNA MER2_type -104 2314 1226 1544 65 5 0 chr17 33187285 33187470 -56317083 - AluY SINE Alu -14 297 112 9086 95 40 62 chr17 33187470 33187727 -56316826 - Tigger1 DNA MER2_type -1192 1226 965 1494 206 14 0 chr17 33187732 33188009 -56316544 + AluJo SINE Alu 24 304 -8 1258 90 34 17 chr17 33188009 33188187 -56316366 + Tigger1 DNA MER2_type 1232 1412 -1006 180 77 0 0 chr17 33188198 33188224 -56316329 + (CA)n Simple_repeat Simple_repeat 1 26 0 1642 178 3 24 chr17 33188232 33188525 -56316028 - AluJo SINE Alu -20 292 6 270 167 36 0 chr17 33188529 33188613 -56315940 + (TA)n Simple_repeat Simple_repeat 2 88 0 288 282 77 17 chr17 33188713 33188830 -56315723 + MIR SINE MIR 19 142 -66 193 260 20 0 chr17 33188988 33189038 -56315515 - MIR3 SINE MIR -14 194 144 459 343 98 0 chr17 33189486 33189680 -56314873 + L1ME LINE L1 5499 5733 -388 1729 166 0 27 chr17 33189680 33189981 -56314572 + AluJb SINE Alu 1 293 -19 459 343 98 0 chr17 33189981 33190083 -56314470 + L1ME LINE L1 5733 5824 -297 2221 117 0 10 chr17 33190089 33190396 -56314157 + AluSx SINE Alu 1 304 -8 709 181 84 0 chr17 33190435 33190590 -56313963 - L1MB4 LINE L1 -6 6174 6007 27 49 0 0 chr17 33191076 33191117 -56313436 + AT_rich Low_complexity Low_complexity 1 41 0 987 193 0 0 chr17 33191175 33191346 -56313207 - FRAM SINE Alu -10 166 1 235 136 9 0 chr17 33191483 33191525 -56313028 + MIR SINE MIR 110 154 -54 192 216 0 0 chr17 33191793 33191830 -56312723 + MIR SINE MIR 156 192 -70 23 0 0 0 chr17 33192445 33192468 -56312085 + AT_rich Low_complexity Low_complexity 1 23 0 2209 93 10 0 chr17 33192507 33192797 -56311756 + AluSq SINE Alu 1 293 -20 1545 124 34 21 chr17 33193184 33193405 -56311148 - MER46A DNA MER2_type -2495 236 10 2053 113 11 0 chr17 33193405 33193689 -56310864 + AluSg SINE Alu 16 302 -8 1545 124 34 21 chr17 33193689 33193700 -56310853 - MER46A DNA MER2_type -2721 10 1 1313 162 61 4 chr17 33194099 33194377 -56310176 + MER33 DNA MER1_type 31 324 0 1455 165 4 20 chr17 33195410 33195659 -56308894 - AluSx SINE Alu -14 298 54 451 219 20 62 chr17 33196191 33196337 -56308216 - L1MC4 LINE L1 0 8042 7903 1792 160 11 4 chr17 33196499 33196827 -56307726 - AluSx SINE Alu 0 330 1 1010 193 20 5 chr17 33197132 33197334 -56307219 - MER3 DNA MER1_type -4 205 1 986 53 0 0 chr17 33197430 33197543 -56307010 + AluY SINE Alu 2 114 -197 2353 96 3 3 chr17 33197648 33197951 -56306602 - AluSq SINE Alu -2 311 9 416 133 12 60 chr17 33197951 33198034 -56306519 + MLT1F LTR MaLR 401 479 -63 5939 106 61 28 chr17 33198034 33200482 -56304071 + SVA Other Other 41 1381 -5 180 0 0 0 chr17 33200532 33200552 -56304001 + (A)n Simple_repeat Simple_repeat 1 20 0 1114 175 0 11 chr17 33200633 33200810 -56303743 - AluJo SINE Alu -128 184 10 278 311 73 89 chr17 33201042 33201357 -56303196 + L2 LINE L2 2294 2603 -711 561 150 165 8 chr17 33201428 33201561 -56302992 - L1MC5 LINE L1 -97 7864 7711 740 320 78 43 chr17 33201577 33202056 -56302497 + L2 LINE L2 2719 3221 -92 1476 170 88 32 chr17 33202056 33202339 -56302214 + AluJo SINE Alu 3 301 -11 740 320 78 43 chr17 33202339 33202432 -56302121 + L2 LINE L2 3221 3309 -4 25 0 0 0 chr17 33202524 33202549 -56302004 + AT_rich Low_complexity Low_complexity 1 25 0 2193 109 0 22 chr17 33203507 33203820 -56300733 - AluSx SINE Alu -6 306 1 2759 152 9 52 chr17 33203908 33204313 -56300240 - L1MB7 LINE L1 -16 6168 5790 2036 129 0 40 chr17 33204313 33204638 -56299915 - AluJo SINE Alu 0 312 1 2759 152 9 52 chr17 33204638 33204773 -56299780 - L1MB7 LINE L1 -394 5790 5651 901 211 7 0 chr17 33204774 33204926 -56299627 - FRAM SINE Alu -31 145 1 2191 129 3 0 chr17 33204933 33205244 -56299309 - AluSp SINE Alu -1 312 1 1809 169 3 3 chr17 33205252 33205542 -56299011 - AluJb SINE Alu -22 290 1 1874 160 3 16 chr17 33205544 33205856 -56298697 - AluJo SINE Alu -4 308 1 1707 136 49 43 chr17 33205856 33206202 -56298351 - L1MB7 LINE L1 -513 5667 5320 2257 74 0 7 chr17 33206215 33206499 -56298054 - AluY SINE Alu -29 282 1 1360 188 12 16 chr17 33206503 33206753 -56297800 - AluJo SINE Alu -20 292 44 21 0 0 0 chr17 33206793 33206814 -56297739 + AT_rich Low_complexity Low_complexity 1 21 0 626 158 67 42 chr17 33206819 33206839 -56297714 - FLAM_C SINE Alu -184 128 110 2173 127 3 0 chr17 33206839 33207139 -56297414 + AluSx SINE Alu 1 301 -11 626 158 67 42 chr17 33207139 33207238 -56297315 - FLAM_C SINE Alu -202 110 6 1478 231 55 25 chr17 33207367 33207415 -56297138 + Cheshire DNA MER1_type 37 82 -2338 2004 122 56 0 chr17 33207415 33207702 -56296851 - AluSx SINE Alu -9 303 1 1478 231 55 25 chr17 33207702 33208051 -56296502 + Cheshire DNA MER1_type 82 446 -1974 3434 161 60 2 chr17 33208066 33208679 -56295874 + Cheshire DNA MER1_type 1772 2420 0 2271 92 3 13 chr17 33208851 33209165 -56295388 + AluY SINE Alu 1 311 0 1798 121 111 4 chr17 33209559 33209839 -56294714 - AluSx SINE Alu -2 310 1 2221 117 0 0 chr17 33210006 33210305 -56294248 + AluY SINE Alu 1 299 -12 2175 110 7 0 chr17 33210634 33210926 -56293627 - AluSx SINE Alu -18 294 1 189 0 0 0 chr17 33212162 33212183 -56292370 + (T)n Simple_repeat Simple_repeat 1 21 0 2315 83 17 3 chr17 33212494 33212794 -56291759 - AluSc SINE Alu -5 304 1 786 141 33 8 chr17 33213975 33214096 -56290457 - FLAM_C SINE Alu -17 126 3 987 173 147 0 chr17 33214216 33214407 -56290146 - MER20 DNA MER1_type 0 219 1 2336 92 10 0 chr17 33214648 33214954 -56289599 - AluY SINE Alu -2 309 1 1221 190 107 76 chr17 33214954 33215243 -56289310 - AluJo SINE Alu -4 298 1 339 304 74 55 chr17 33215886 33216011 -56288542 + L2 LINE L2 2642 2763 -509 1704 177 0 32 chr17 33216011 33216321 -56288232 - AluJo SINE Alu -12 300 1 339 304 74 55 chr17 33216321 33216636 -56287917 + L2 LINE L2 2763 3112 -160 1695 81 5 9 chr17 33216671 33216893 -56287660 + AluSg SINE Alu 1 221 -89 785 225 0 0 chr17 33217526 33217699 -56286854 + AluSg/x SINE Alu 127 299 -11 191 270 95 108 chr17 33217699 33217795 -56286758 + L2 LINE L2 3123 3219 -53 2031 93 3 93 chr17 33217795 33217970 -56286583 - AluSq SINE Alu -21 292 158 2458 73 0 13 chr17 33217970 33218285 -56286268 - AluY SINE Alu 0 311 1 2031 93 3 93 chr17 33218285 33218430 -56286123 - AluSq SINE Alu -155 158 1 191 270 95 108 chr17 33218430 33218443 -56286110 + L2 LINE L2 3219 3231 -41 1852 135 11 14 chr17 33218443 33218752 -56285801 - AluJb SINE Alu 0 309 2 191 270 95 108 chr17 33218752 33218788 -56285765 + L2 LINE L2 3231 3268 -4 1903 153 7 16 chr17 33218984 33219292 -56285261 + AluJb SINE Alu 1 305 -7 23 78 0 0 chr17 33219433 33219484 -56285069 + AT_rich Low_complexity Low_complexity 1 51 0 929 75 8 0 chr17 33220501 33220621 -56283932 - AluY SINE Alu -12 299 179 291 306 66 10 chr17 33220627 33220823 -56283730 - L1ME4a LINE L1 -237 5884 5678 1699 171 0 54 chr17 33221035 33221351 -56283202 + AluJo SINE Alu 1 299 -13 295 294 66 15 chr17 33222241 33222438 -56282115 - L1ME4a LINE L1 -237 5884 5678 2063 119 0 0 chr17 33222460 33222768 -56281785 - AluSc SINE Alu 0 308 1 22 0 0 0 chr17 33223305 33223327 -56281226 + AT_rich Low_complexity Low_complexity 1 22 0 257 257 27 14 chr17 33223673 33223747 -56280806 + MIR SINE MIR 178 252 -10 1778 150 80 0 chr17 33223825 33224112 -56280441 - AluJb SINE Alu -2 310 1 700 145 61 46 chr17 33224646 33224777 -56279776 - FLAM_A SINE Alu 0 133 1 2309 78 37 0 chr17 33224828 33225123 -56279430 + AluSp SINE Alu 1 306 -7 32 43 0 0 chr17 33225163 33225209 -56279344 + AT_rich Low_complexity Low_complexity 1 46 0 2170 100 20 13 chr17 33225265 33225565 -56278988 + AluSx SINE Alu 1 302 -10 2599 30 123 15 chr17 33225597 33225931 -56278622 - L1PA8 LINE L1 0 6172 5803 21 0 0 0 chr17 33225935 33225956 -56278597 + AT_rich Low_complexity Low_complexity 1 21 0 399 96 0 0 chr17 33226085 33226137 -56278416 + MER66A LTR ERV1 287 338 -140 625 104 198 0 chr17 33226217 33226313 -56278240 + AluSp SINE Alu 2 116 -197 * 686 111 0 0 chr17 33226310 33226400 -56278153 - AluJ/FLAM SINE Alu -218 94 5 339 355 57 0 chr17 33226567 33226691 -56277862 + MIR SINE MIR 20 150 -112 1202 156 0 0 chr17 33226751 33226931 -56277622 - AluSq SINE Alu 0 313 134 2440 74 0 6 chr17 33227000 33227311 -56277242 - AluY SINE Alu -2 309 1 250 337 30 46 chr17 33227655 33227825 -56276728 - MER5B DNA MER1_type -2 187 6 330 327 7 3 chr17 33228010 33228178 -56276375 + L1ME LINE L1 5661 5817 -304 21 0 0 0 chr17 33229267 33229288 -56275265 + AT_rich Low_complexity Low_complexity 1 21 0 234 322 46 23 chr17 33230614 33230701 -56273852 + 5S rRNA rRNA 4 92 -29 241 338 0 0 chr17 33232493 33232564 -56271989 + MARNA DNA Mariner 88 158 -428 565 220 75 29 chr17 33232801 33232974 -56271579 - MARNA DNA Mariner -346 240 60 2312 284 131 38 chr17 33233088 33234290 -56270263 - L3 LINE CR1 -12 1565 253 908 244 127 65 chr17 33234730 33235037 -56269516 - MER102a DNA MER1_type -2 328 3 2072 117 43 0 chr17 33235453 33235752 -56268801 - AluSx SINE Alu 0 312 1 30 59 0 0 chr17 33236580 33236631 -56267922 + AT_rich Low_complexity Low_complexity 1 51 0 1997 61 0 0 chr17 33238033 33238279 -56266274 + AluSc SINE Alu 1 246 -63 362 208 10 10 chr17 33238543 33238639 -56265914 + AluSc SINE Alu 204 299 0 1979 133 3 3 chr17 33238696 33239026 -56265527 - AluSx SINE Alu 0 312 1 1607 165 0 57 chr17 33239070 33239386 -56265167 + AluJb SINE Alu 1 298 -14 1536 195 3 22 chr17 33239389 33239707 -56264846 + AluJo SINE Alu 1 312 0 576 172 10 0 chr17 33240187 33240286 -56264267 - FLAM_C SINE Alu -39 104 5 242 302 47 40 chr17 33240839 33240961 -56263592 + L1ME LINE L1 5617 5742 -379 1589 168 62 7 chr17 33240961 33241252 -56263301 + AluJo SINE Alu 1 307 -5 242 302 47 40 chr17 33241252 33241278 -56263275 + L1ME LINE L1 5742 5766 -355 1778 107 111 4 chr17 33241416 33241687 -56262866 + AluSx SINE Alu 1 300 -12 2107 121 0 19 chr17 33241949 33242263 -56262290 + AluSc SINE Alu 1 308 -1 696 190 0 0 chr17 33242702 33242823 -56261730 + FLAM_C SINE Alu 21 141 -2 2200 110 3 0 chr17 33244267 33244577 -56259976 - AluSx SINE Alu -1 311 1 22 0 0 0 chr17 33245447 33245469 -56259084 + AT_rich Low_complexity Low_complexity 1 22 0 2119 102 3 10 chr17 33246699 33247004 -56257549 + AluSq SINE Alu 1 303 -10 980 158 18 6 chr17 33247273 33247437 -56257116 - FRAM SINE Alu 0 166 1 1444 188 10 30 chr17 33247866 33248170 -56256383 - AluJb SINE Alu -14 298 1 1461 86 131 57 chr17 33248363 33248608 -56255945 - AluSx SINE Alu -13 299 37 24 0 0 0 chr17 33248615 33248639 -56255914 + AT_rich Low_complexity Low_complexity 1 24 0 1906 127 6 52 chr17 33249410 33249734 -56254819 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr17 33250060 33250094 -56254459 + AT_rich Low_complexity Low_complexity 1 34 0 832 123 158 0 chr17 33250554 33250700 -56253853 - AluSg/x SINE Alu -17 295 127 2255 73 3 13 chr17 33250924 33251224 -56253329 - AluSq SINE Alu -16 297 1 1177 164 138 36 chr17 33251305 33251530 -56253023 - MER58B DNA MER1_type -2088 332 73 2086 97 17 0 chr17 33251530 33251818 -56252735 + AluSx SINE Alu 1 293 -19 1177 164 138 36 chr17 33251818 33251867 -56252686 - MER58B DNA MER1_type -2347 73 30 437 240 25 135 chr17 33252368 33252471 -56252082 - MIR3 SINE MIR -15 193 121 1866 86 20 0 chr17 33252471 33252726 -56251827 + AluY SINE Alu 6 265 -46 437 240 25 135 chr17 33252726 33252822 -56251731 - MIR3 SINE MIR -87 121 16 2410 80 0 3 chr17 33253456 33253770 -56250783 - AluSq SINE Alu 0 313 1 439 113 99 230 chr17 33253797 33254010 -56250543 + MER5A DNA MER1_type 5 189 0 188 298 206 7 chr17 33254237 33254378 -56250175 + L2 LINE L2 2849 3017 -255 384 209 250 7 chr17 33254379 33254527 -56250026 - HAL1 LINE L1 -1870 637 454 2226 92 0 0 chr17 33254746 33255039 -56249514 - AluSc SINE Alu -16 293 1 246 286 217 6 chr17 33255187 33255330 -56249223 + MIR SINE MIR 13 179 -29 2210 126 19 40 chr17 33255541 33255914 -56248639 - MLT1A1 LTR MaLR 0 365 1 429 313 49 6 chr17 33255968 33256131 -56248422 + L2 LINE L2 2040 2209 -1105 1678 163 7 13 chr17 33256131 33256431 -56248122 - AluJb SINE Alu -14 298 1 2541 156 19 89 chr17 33256499 33257063 -56247490 - L1MB5 LINE L1 -224 5950 5426 1577 162 47 136 chr17 33257057 33257273 -56247280 - L1MC4a LINE L1 -659 7149 6915 * 2480 68 0 0 chr17 33257273 33257581 -56246972 - AluSg SINE Alu -2 308 1 1577 162 47 136 chr17 33257581 33257900 -56246653 - L1MC4a LINE L1 -893 6915 6662 230 274 48 0 chr17 33257900 33257984 -56246569 + L2 LINE L2 2193 2280 -1034 2260 109 0 3 chr17 33258008 33258320 -56246233 - AluSx SINE Alu -1 311 1 454 287 218 33 chr17 33258425 33258685 -56245868 + L2 LINE L2 2511 2722 -592 2296 67 0 0 chr17 33258685 33259003 -56245550 - AluY SINE Alu 0 318 1 454 287 218 33 chr17 33259003 33259135 -56245418 + L2 LINE L2 2722 2977 -337 2085 114 7 0 chr17 33259248 33259546 -56245007 + AluSx SINE Alu 1 300 -12 965 152 9 0 chr17 33259592 33259849 -56244704 + CT-rich Low_complexity Low_complexity 2 434 0 2270 94 7 0 chr17 33259924 33260233 -56244320 + AluSp SINE Alu 1 311 -2 466 247 0 0 chr17 33260238 33260335 -56244218 + L2 LINE L2 3176 3272 0 2244 81 3 10 chr17 33260873 33261182 -56243371 + AluSx SINE Alu 1 307 -5 1289 229 7 3 chr17 33263886 33264174 -56240379 + AluJb SINE Alu 1 289 -13 342 17 58 67 chr17 33264181 33264301 -56240252 + (TA)n Simple_repeat Simple_repeat 2 120 0 2633 184 101 6 chr17 33264303 33264808 -56239745 - MLT1F1 LTR MaLR -9 558 6 357 253 11 0 chr17 33264818 33264909 -56239644 + L1MC4a LINE L1 5804 5895 -1913 2207 84 0 7 chr17 33264957 33265253 -56239300 + AluY SINE Alu 1 294 -17 23 0 0 0 chr17 33265253 33265276 -56239277 + AT_rich Low_complexity Low_complexity 1 23 0 23 78 0 0 chr17 33265425 33265476 -56239077 + AT_rich Low_complexity Low_complexity 1 51 0 1437 197 25 7 chr17 33265516 33265800 -56238753 - AluJo SINE Alu -17 295 7 330 164 209 0 chr17 33265838 33265905 -56238648 + AluJ/FRAM SINE Alu 222 302 0 605 279 267 6 chr17 33266055 33266273 -56238280 + L2 LINE L2 1415 1575 -1739 180 0 0 0 chr17 33266273 33266293 -56238260 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 605 279 267 6 chr17 33266293 33266400 -56238153 + L2 LINE L2 1575 1825 -1489 2554 145 25 50 chr17 33266405 33266824 -56237729 - L1MB7 LINE L1 -21 6163 5756 1801 113 73 0 chr17 33266824 33267099 -56237454 + AluSx SINE Alu 1 295 -17 2554 145 25 50 chr17 33267099 33267161 -56237392 - L1MB7 LINE L1 -428 5756 5694 1314 152 6 132 chr17 33267281 33267451 -56237102 - AluJb SINE Alu -13 299 109 204 40 0 0 chr17 33267451 33267476 -56237077 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2145 82 0 11 chr17 33267478 33267757 -56236796 - AluSp SINE Alu -37 276 1 1314 152 6 132 chr17 33267757 33267925 -56236628 - AluJb SINE Alu -204 108 1 1026 223 5 9 chr17 33267927 33268151 -56236402 - L1M4 LINE L1 -1905 4241 4019 1057 139 35 70 chr17 33268152 33268325 -56236228 - AluJb SINE Alu -5 307 142 2209 114 0 0 chr17 33268325 33268631 -56235922 - AluSx SINE Alu -6 306 1 1057 139 35 70 chr17 33268631 33268687 -56235866 - AluJb SINE Alu -170 142 86 1686 174 24 83 chr17 33268687 33269013 -56235540 - L1M4 LINE L1 -2120 4026 3682 2619 29 0 0 chr17 33269013 33269322 -56235231 - AluY SINE Alu -2 309 1 1686 174 24 83 chr17 33269322 33269373 -56235180 - L1M4 LINE L1 -2464 3682 3630 2278 84 0 0 chr17 33269373 33269670 -56234883 - AluY SINE Alu -14 297 1 1686 174 24 83 chr17 33269670 33269784 -56234769 - L1M4 LINE L1 -2516 3630 3563 2453 247 27 77 chr17 33269787 33270682 -56233871 + L2 LINE L2 1839 2688 -626 737 219 11 22 chr17 33270686 33270796 -56233757 - L1M4 LINE L1 -2187 3959 3850 1303 173 43 108 chr17 33270796 33271119 -56233434 - AluJo SINE Alu 0 302 1 737 219 11 22 chr17 33271119 33271186 -56233367 - L1M4 LINE L1 -2296 3850 3784 2313 96 3 3 chr17 33271397 33271710 -56232843 + AluSp SINE Alu 1 313 0 482 272 122 22 chr17 33271730 33271910 -56232643 - MIR SINE MIR -43 219 22 1591 150 24 14 chr17 33272500 33272794 -56231759 - AluJo SINE Alu -15 297 1 718 186 91 93 chr17 33273007 33273217 -56231336 - L1MC5 LINE L1 -50 7911 7702 180 0 0 0 chr17 33273217 33273237 -56231316 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 718 186 91 93 chr17 33273237 33273273 -56231280 - L1MC5 LINE L1 -259 7702 7667 1522 181 10 20 chr17 33273273 33273565 -56230988 + AluJb SINE Alu 1 289 -23 718 186 91 93 chr17 33273565 33273944 -56230609 - L1MC5 LINE L1 -294 7667 7190 1954 130 0 0 chr17 33274373 33274680 -56229873 - AluSq SINE Alu -1 312 6 1674 175 0 14 chr17 33274714 33275011 -56229542 - AluJo SINE Alu -2 310 18 2131 124 0 0 chr17 33275111 33275417 -56229136 - AluSx SINE Alu -6 306 1 369 250 189 30 chr17 33275566 33275730 -56228823 - MIR SINE MIR -6 256 67 1821 150 17 7 chr17 33276176 33276469 -56228084 + AluSx SINE Alu 1 296 -16 2387 41 0 14 chr17 33276625 33276919 -56227634 - AluY SINE Alu -21 290 1 397 322 142 19 chr17 33278242 33278509 -56226044 + L2 LINE L2 2919 3218 -54 533 299 51 0 chr17 33278555 33278732 -56225821 - MIR3 SINE MIR -1 207 22 2224 77 3 55 chr17 33278754 33279081 -56225472 + AluSp SINE Alu 2 311 -2 746 212 18 30 chr17 33279185 33279350 -56225203 - MIR3 SINE MIR -13 195 33 258 56 0 0 chr17 33279805 33279841 -56224712 + (CTG)n Simple_repeat Simple_repeat 3 38 0 262 314 0 0 chr17 33280046 33280116 -56224437 - L2 LINE L2 -1 3312 3243 2157 93 7 0 chr17 33280136 33280426 -56224127 + AluSx SINE Alu 15 306 -6 206 222 0 123 chr17 33280938 33281019 -56223534 + MIR SINE MIR 120 190 -72 406 367 80 21 chr17 33281187 33281424 -56223129 - L2 LINE L2 -1 3271 3021 1223 136 0 51 chr17 33281456 33281534 -56223019 - AluJo SINE Alu -109 203 123 2413 65 0 0 chr17 33281534 33281840 -56222713 - AluY SINE Alu -5 306 1 1223 136 0 51 chr17 33281840 33281975 -56222578 - AluJo SINE Alu -189 123 1 236 343 50 0 chr17 33283086 33283185 -56221368 + L2 LINE L2 3162 3265 -7 227 271 191 24 chr17 33283340 33283550 -56221003 + L2 LINE L2 2862 3106 -166 422 290 172 39 chr17 33284280 33284376 -56220177 + L2 LINE L2 2589 2671 -601 2224 71 3 7 chr17 33284376 33284673 -56219880 - AluY SINE Alu -15 296 1 422 290 172 39 chr17 33284673 33285164 -56219389 + L2 LINE L2 2671 3256 -16 41 78 0 0 chr17 33286691 33286781 -56217772 + GC_rich Low_complexity Low_complexity 1 90 0 229 269 6 57 chr17 33286834 33287009 -56217544 + G-rich Low_complexity Low_complexity 3 168 0 185 65 32 0 chr17 33288296 33288327 -56216226 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1899 166 0 0 chr17 33290008 33290310 -56214243 + AluJb SINE Alu 1 302 -10 423 185 49 0 chr17 33290987 33291068 -56213485 + AluJ/FLAM SINE Alu 2 86 -226 231 36 0 0 chr17 33291075 33291103 -56213450 + (A)n Simple_repeat Simple_repeat 1 28 0 747 146 0 32 chr17 33291870 33291993 -56212560 + FLAM_C SINE Alu 15 133 -10 219 348 35 0 chr17 33292411 33292519 -56212034 - MIR SINE MIR -78 130 48 478 256 128 6 chr17 33292890 33293046 -56211507 + MIR SINE MIR 16 190 -72 294 333 108 21 chr17 33293881 33293931 -56210622 - MIR3 SINE MIR 0 208 164 2256 102 0 3 chr17 33293931 33294244 -56210309 - AluSq SINE Alu -1 312 1 294 333 108 21 chr17 33294244 33294379 -56210174 - MIR3 SINE MIR -44 164 7 550 314 94 0 chr17 33294424 33294615 -56209938 + MIR SINE MIR 45 253 -9 2081 141 0 0 chr17 33294672 33294978 -56209575 - AluSx SINE Alu -6 306 1 773 172 0 30 chr17 33295526 33295660 -56208893 + FLAM_C SINE Alu 2 131 -12 396 252 0 0 chr17 33295729 33295852 -56208701 + (TG)n Simple_repeat Simple_repeat 2 124 0 264 297 166 0 chr17 33296942 33297087 -56207466 + MIR SINE MIR 38 206 -56 352 239 11 61 chr17 33297575 33297755 -56206798 + (CCCTAG)n Simple_repeat Simple_repeat 5 175 0 405 218 11 62 chr17 33297766 33297945 -56206608 + (CCCTAG)n Simple_repeat Simple_repeat 6 175 0 502 245 47 0 chr17 33298759 33298865 -56205688 + MER103 DNA DNA 9 119 -47 2172 97 7 3 chr17 33298958 33299256 -56205297 + AluSx SINE Alu 1 299 -13 524 268 55 6 chr17 33299553 33299717 -56204836 + MIR SINE MIR 21 192 -70 295 241 18 98 chr17 33299737 33299787 -56204766 + MER94 DNA DNA 25 63 -71 1579 184 10 26 chr17 33299787 33300092 -56204461 + AluJo SINE Alu 1 300 -12 295 241 18 98 chr17 33300092 33300153 -56204400 + MER94 DNA DNA 63 127 -7 190 286 39 39 chr17 33300690 33300767 -56203786 - MIR SINE MIR -116 146 70 201 196 0 0 chr17 33301772 33301823 -56202730 + CT-rich Low_complexity Low_complexity 1 51 0 578 263 78 69 chr17 33302872 33303089 -56201464 + MIR SINE MIR 44 262 0 1711 162 3 7 chr17 33303229 33303525 -56201028 + AluJo SINE Alu 1 295 -17 2417 60 0 0 chr17 33303569 33303867 -56200686 - AluY SINE Alu -13 298 1 2486 54 0 6 chr17 33304255 33304568 -56199985 - AluY SINE Alu 0 311 1 536 283 113 30 chr17 33304648 33304984 -56199569 - L2 LINE L2 -2 3270 2907 307 186 88 69 chr17 33305349 33305451 -56199102 + MIR3 SINE MIR 105 208 0 271 283 52 104 chr17 33305890 33306063 -56198490 - MLT1K LTR MaLR -132 456 293 359 191 0 12 chr17 33306063 33306147 -56198406 + GA-rich Low_complexity Low_complexity 3 85 0 253 310 190 13 chr17 33307367 33307525 -56197028 + MIR SINE MIR 3 188 -74 677 278 64 0 chr17 33307713 33307886 -56196667 + MER91A DNA MER1_type 3 186 -10 464 315 0 8 chr17 33307883 33308013 -56196540 + MIR SINE MIR 23 151 -111 * 185 286 259 0 chr17 33308034 33308146 -56196407 + L2 LINE L2 3104 3244 -28 464 242 225 50 chr17 33309127 33309367 -56195186 + L2 LINE L2 2989 3270 -2 593 294 14 28 chr17 33309400 33309611 -56194942 + MIR SINE MIR 55 262 0 304 286 79 21 chr17 33311183 33311323 -56193230 - MIR SINE MIR -25 237 90 1818 174 7 0 chr17 33311666 33311976 -56192577 + AluJo SINE Alu 1 312 0 2437 87 0 0 chr17 33311996 33312308 -56192245 + AluSx SINE Alu 1 312 0 1987 139 3 3 chr17 33312345 33312648 -56191905 + AluSx SINE Alu 1 303 -9 2224 103 0 0 chr17 33312713 33313015 -56191538 - AluSg SINE Alu -8 302 1 1977 113 13 0 chr17 33313180 33313480 -56191073 + L1MB3 LINE L1 5495 5798 -385 2048 113 10 0 chr17 33313481 33313772 -56190781 + AluSx SINE Alu 14 307 -5 568 116 70 0 chr17 33313778 33313864 -56190689 + AluJ/FLAM SINE Alu 2 93 -219 235 213 64 0 chr17 33313864 33313911 -56190642 + Alu SINE Alu 209 258 -42 2139 140 39 23 chr17 33313911 33314245 -56190308 + L1MB3 LINE L1 5792 6134 -49 2113 109 7 10 chr17 33314245 33314547 -56190006 + AluSx SINE Alu 1 301 -11 2139 140 39 23 chr17 33314547 33314598 -56189955 + L1MB3 LINE L1 6134 6183 0 2260 84 3 3 chr17 33314794 33315091 -56189462 + AluSp SINE Alu 4 300 -13 2168 67 9 61 chr17 33316890 33317218 -56187335 + AluY SINE Alu 1 311 0 2195 114 0 0 chr17 33317273 33317579 -56186974 - AluSg SINE Alu -4 306 1 1400 128 25 122 chr17 33317721 33318096 -56186457 - AluYb8 SINE Alu 0 344 1 2082 97 22 0 chr17 33318131 33318448 -56186105 + AluSx SINE Alu 1 323 0 246 292 161 0 chr17 33318467 33318597 -56185956 + MIR3 SINE MIR 10 160 -48 898 158 0 0 chr17 33318612 33318745 -56185808 - FLAM_C SINE Alu 0 133 1 257 289 78 11 chr17 33318864 33318954 -56185599 + L2 LINE L2 3121 3216 -56 330 87 0 0 chr17 33318974 33319020 -56185533 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 281 289 67 67 chr17 33319354 33319588 -56184965 + MIR SINE MIR 2 237 -25 582 262 77 0 chr17 33320976 33321144 -56183409 - MIR SINE MIR -75 187 7 1955 139 0 19 chr17 33321211 33321521 -56183032 + AluJo SINE Alu 1 304 -8 290 359 98 16 chr17 33321609 33321793 -56182760 - MIR SINE MIR -4 258 60 2190 105 0 7 chr17 33321818 33322124 -56182429 - AluSg1 SINE Alu -4 305 2 826 128 8 8 chr17 33322231 33322364 -56182189 + FLAM_C SINE Alu 1 133 -10 350 164 60 0 chr17 33322414 33322481 -56182072 + L2 LINE L2 3242 3312 -1 2128 121 0 0 chr17 33322487 33322785 -56181768 + AluSq SINE Alu 4 301 -12 1979 117 0 35 chr17 33323292 33323477 -56181076 - AluSx SINE Alu -6 306 135 189 0 0 0 chr17 33323477 33323498 -56181055 + (TA)n Simple_repeat Simple_repeat 1 21 0 1979 117 0 35 chr17 33323498 33323629 -56180924 - AluSx SINE Alu -177 135 1 324 156 13 65 chr17 33323921 33323998 -56180555 - MIR SINE MIR -62 146 74 216 0 0 0 chr17 33324588 33324612 -56179941 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 350 320 154 23 chr17 33325373 33325548 -56179005 + MIR SINE MIR 15 212 -50 1911 149 10 10 chr17 33325781 33326090 -56178463 + AluJb SINE Alu 1 309 -3 219 186 0 0 chr17 33326090 33326133 -56178420 + GA-rich Low_complexity Low_complexity 1 43 0 1727 65 0 0 chr17 33326663 33326877 -56177676 + AluY SINE Alu 82 295 -16 490 256 77 0 chr17 33326917 33327073 -56177480 - MIR3 SINE MIR -10 198 31 2308 59 0 10 chr17 33327087 33327377 -56177176 + AluSc SINE Alu 1 287 -22 486 246 156 0 chr17 33327455 33327577 -56176976 + MIR SINE MIR 3 143 -119 1742 170 0 13 chr17 33327583 33327889 -56176664 + AluJb SINE Alu 1 302 -10 203 232 29 58 chr17 33328160 33328229 -56176324 + L2 LINE L2 3246 3312 -1 240 236 18 0 chr17 33328451 33328506 -56176047 + GA-rich Low_complexity Low_complexity 4 59 0 1505 150 15 108 chr17 33329246 33329579 -56174974 + AluJb SINE Alu 1 302 0 267 206 0 130 chr17 33329700 33329731 -56174822 - MER116 DNA Mariner 0 80 47 2140 102 0 14 chr17 33329731 33330024 -56174529 + AluSg SINE Alu 1 289 -21 267 206 0 130 chr17 33330024 33330084 -56174469 - MER116 DNA Mariner -33 47 1 333 0 0 0 chr17 33330125 33330162 -56174391 + (TG)n Simple_repeat Simple_repeat 1 37 0 191 325 67 75 chr17 33330201 33330216 -56174337 + MIR SINE MIR 20 34 -228 2336 80 3 0 chr17 33330216 33330515 -56174038 + AluSp SINE Alu 1 300 -13 191 325 67 75 chr17 33330515 33330619 -56173934 + MIR SINE MIR 34 138 -124 1809 117 110 0 chr17 33330713 33330994 -56173559 - AluSx SINE Alu 0 312 1 2185 81 3 26 chr17 33331245 33331383 -56173170 + AluY SINE Alu 1 141 -170 2191 98 0 0 chr17 33331383 33331680 -56172873 + AluSg SINE Alu 6 302 -8 2185 81 3 26 chr17 33331680 33331849 -56172704 + AluY SINE Alu 141 301 -10 262 228 114 61 chr17 33332459 33332573 -56171980 + MIR3 SINE MIR 46 165 -43 283 281 0 12 chr17 33332575 33332657 -56171896 - MER102a DNA MER1_type -8 322 242 476 176 63 94 chr17 33332734 33332893 -56171660 - MIR SINE MIR -11 251 98 1864 161 3 3 chr17 33333098 33333408 -56171145 + AluJo SINE Alu 1 310 -2 234 132 0 26 chr17 33333423 33333461 -56171092 + AluJo SINE Alu 1 37 -266 1879 142 10 7 chr17 33333461 33333763 -56170790 - AluSx SINE Alu -9 303 1 1599 159 30 7 chr17 33333765 33334035 -56170518 - AluJb SINE Alu -22 290 15 1676 168 4 0 chr17 33334040 33334308 -56170245 + AluJo SINE Alu 21 289 -23 2415 116 14 43 chr17 33334325 33334697 -56169856 - L1MB3 LINE L1 -3 6180 5820 2250 74 3 10 chr17 33334697 33334996 -56169557 - AluY SINE Alu -6 305 9 2415 116 14 43 chr17 33334996 33335037 -56169516 - L1MB3 LINE L1 -363 5820 5779 485 176 84 2 chr17 33335222 33335346 -56169207 - L1MB3 LINE L1 -380 5791 5651 544 71 0 0 chr17 33335357 33335427 -56169126 - AluJ/FLAM SINE Alu -241 71 2 242 343 120 30 chr17 33335441 33335674 -56168879 + L3 LINE CR1 1312 1565 -12 966 336 105 27 chr17 33336420 33337078 -56167475 - L3 LINE CR1 -11 1566 858 25 31 0 0 chr17 33337427 33337459 -56167094 + AT_rich Low_complexity Low_complexity 1 32 0 1538 171 7 23 chr17 33337459 33337763 -56166790 - AluJo SINE Alu -13 299 1 480 0 56 14 chr17 33337763 33337834 -56166719 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2078 102 0 3 chr17 33337834 33338118 -56166435 - AluSx SINE Alu -29 283 1 238 159 0 0 chr17 33338128 33338172 -56166381 - L1ME3A LINE L1 0 6170 6127 440 335 72 22 chr17 33338593 33338871 -56165682 - L2 LINE L2 -463 2851 2560 1459 101 132 39 chr17 33338872 33339130 -56165423 + AluJo SINE Alu 1 282 -30 808 147 236 0 chr17 33339143 33339300 -56165253 + AluJo SINE Alu 118 311 -1 796 112 0 0 chr17 33339301 33339408 -56165145 + AluSq/x SINE Alu 2 108 -204 522 282 35 12 chr17 33339454 33339624 -56164929 - MIR SINE MIR -61 201 28 2554 43 0 0 chr17 33340086 33340390 -56164163 + AluY SINE Alu 1 304 -7 246 180 66 16 chr17 33340753 33340814 -56163739 + MIR SINE MIR 116 179 -83 1390 158 62 34 chr17 33340938 33341230 -56163323 + AluJb SINE Alu 3 302 -10 2124 97 17 0 chr17 33341270 33341569 -56162984 - AluSx SINE Alu -8 304 1 546 283 102 37 chr17 33341569 33341813 -56162740 + L2 LINE L2 3023 3282 -31 237 132 0 0 chr17 33343065 33343103 -56161450 + (TG)n Simple_repeat Simple_repeat 1 38 0 186 281 0 18 chr17 33343629 33343686 -56160867 - MIR3 SINE MIR -29 179 124 2197 92 3 3 chr17 33345861 33346165 -56158388 + AluSx SINE Alu 1 304 -8 2238 104 0 0 chr17 33346168 33346477 -56158076 + AluSg SINE Alu 1 309 -1 928 121 0 0 chr17 33346681 33346813 -56157740 + AluSq/x SINE Alu 2 133 -179 1934 105 14 4 chr17 33346817 33347138 -56157415 + AluSg SINE Alu 2 325 0 2278 94 3 0 chr17 33347300 33347609 -56156944 + AluSq SINE Alu 1 310 -3 2124 112 3 0 chr17 33347609 33347904 -56156649 + AluSp SINE Alu 4 299 -14 365 263 227 21 chr17 33347912 33348106 -56156447 - MIR SINE MIR -13 249 16 2120 81 4 0 chr17 33348335 33348608 -56155945 - AluSp SINE Alu -39 274 1 1611 167 28 0 chr17 33348610 33348897 -56155656 - AluJo SINE Alu -17 295 1 21 36 0 0 chr17 33349402 33349430 -56155123 + AT_rich Low_complexity Low_complexity 1 28 0 2160 116 0 0 chr17 33349554 33349864 -56154689 + AluY SINE Alu 1 310 -1 2475 51 0 0 chr17 33350015 33350311 -56154242 - AluY SINE Alu -15 296 1 674 128 145 17 chr17 33350344 33350461 -56154092 + FLAM_C SINE Alu 1 132 -1 2178 106 0 0 chr17 33350795 33351088 -56153465 - AluSx SINE Alu -19 293 1 2383 48 3 0 chr17 33351802 33352093 -56152460 - AluY SINE Alu -19 292 1 1973 109 32 0 chr17 33353102 33353387 -56151166 - AluSp SINE Alu -19 294 1 1703 179 0 7 chr17 33353433 33353730 -56150823 + AluJo SINE Alu 7 301 -11 1906 146 0 3 chr17 33353762 33354056 -56150497 - AluSx SINE Alu -19 293 1 325 85 17 17 chr17 33354513 33354572 -56149981 - AluSp/q SINE Alu -1 302 244 948 116 0 0 chr17 33354585 33354714 -56149839 - AluSq/x SINE Alu -183 129 1 607 278 104 16 chr17 33354967 33355323 -56149230 - L1ME2 LINE L1 -258 5906 5526 223 326 78 54 chr17 33356685 33356814 -56147739 + L2 LINE L2 3133 3264 -8 2147 123 0 0 chr17 33357157 33357459 -56147094 - AluJb SINE Alu -10 302 1 1825 141 23 26 chr17 33357809 33358115 -56146438 + AluJb SINE Alu 1 305 -7 1663 155 7 14 chr17 33358124 33358421 -56146132 + AluJo SINE Alu 1 295 -17 1751 100 60 0 chr17 33358551 33358802 -56145751 - AluSg SINE Alu -44 266 1 2356 94 0 0 chr17 33359754 33360061 -56144492 + AluSx SINE Alu 1 307 -5 226 314 91 25 chr17 33360091 33360212 -56144341 + MIR SINE MIR 34 162 -100 1179 144 5 63 chr17 33360323 33360545 -56144008 + AluJb SINE Alu 87 295 -17 685 225 121 0 chr17 33361077 33361259 -56143294 + L2 LINE L2 880 1083 -2231 2262 70 0 17 chr17 33361304 33361605 -56142948 + AluY SINE Alu 1 296 -15 1826 132 20 13 chr17 33361613 33361916 -56142637 + AluJb SINE Alu 1 305 -7 225 227 23 23 chr17 33362839 33362927 -56141626 + (CGGG)n Simple_repeat Simple_repeat 2 89 0 1155 126 0 11 chr17 33363599 33363774 -56140779 + AluSx SINE Alu 1 173 -139 466 144 22 11 chr17 33363775 33363865 -56140688 - MSTD-int LTR MaLR -1643 92 2 367 140 0 0 chr17 33363867 33363924 -56140629 - MSTD LTR MaLR 0 396 340 * 543 181 0 0 chr17 33363922 33364016 -56140537 - MSTC LTR MaLR -333 95 2 * 986 257 20 8 chr17 33364016 33364232 -56140321 + MLT1C LTR MaLR 214 432 -35 829 163 0 0 chr17 33365113 33365242 -56139311 - AluJb SINE Alu -181 131 3 1987 88 92 0 chr17 33365281 33365565 -56138988 + AluY SINE Alu 1 310 -1 2213 116 0 0 chr17 33365572 33365882 -56138671 + AluSg SINE Alu 1 310 0 458 249 56 56 chr17 33365950 33366141 -56138412 - HAL1 LINE L1 -737 1770 1579 2103 121 0 0 chr17 33366141 33366438 -56138115 + AluSg SINE Alu 1 297 -13 1497 87 0 0 chr17 33366495 33366690 -56137863 + AluSc SINE Alu 1 195 -114 736 102 0 0 chr17 33366691 33366789 -56137764 - AluSg SINE Alu -210 100 3 1568 146 101 0 chr17 33366792 33367080 -56137473 - L1MC3 LINE L1 -1001 6784 6468 1412 164 22 15 chr17 33367090 33367358 -56137195 + AluJo SINE Alu 7 276 -36 703 203 0 15 chr17 33367364 33367497 -56137056 - FLAM_C SINE Alu -2 131 1 2039 69 0 8 chr17 33367518 33367780 -56136773 - AluSc SINE Alu -11 298 39 730 186 158 130 chr17 33367822 33367891 -56136662 - MLT1A1 LTR MaLR 0 365 299 1930 140 0 29 chr17 33367891 33368206 -56136347 - AluSx SINE Alu -6 306 1 2164 104 0 10 chr17 33368211 33368519 -56136034 - AluSq SINE Alu 0 313 9 730 186 158 130 chr17 33368519 33368798 -56135755 - MLT1A1 LTR MaLR -69 296 1 670 197 14 21 chr17 33368812 33368954 -56135599 - FLAM_C SINE Alu -1 142 2 2233 84 0 16 chr17 33368960 33369268 -56135285 - AluSx SINE Alu -9 303 1 384 268 113 66 chr17 33369268 33369481 -56135072 + MIR SINE MIR 40 262 0 250 243 56 47 chr17 33369544 33369651 -56134902 - MIR SINE MIR -82 126 19 2218 86 0 10 chr17 33369813 33370114 -56134439 - AluSx SINE Alu -14 298 1 2033 79 7 0 chr17 33370247 33370559 -56133994 + AluSx SINE Alu 2 315 0 2122 75 20 7 chr17 33372922 33373215 -56131338 - AluSq SINE Alu -16 297 1 669 264 0 0 chr17 33373642 33373801 -56130752 - FRAM SINE Alu -13 163 5 2050 103 4 0 chr17 33373840 33374121 -56130432 + AluSg SINE Alu 1 282 -28 1720 107 21 107 chr17 33374445 33374782 -56129771 + AluSx SINE Alu 1 308 -4 247 209 0 0 chr17 33374815 33374858 -56129695 - Charlie5 DNA MER1_type -2407 205 163 1401 180 27 24 chr17 33374931 33375225 -56129328 - AluJo SINE Alu -17 295 1 1233 248 243 51 chr17 33375225 33375281 -56129272 - L2 LINE L2 -532 2782 2738 1381 171 109 7 chr17 33375281 33375555 -56128998 - AluSx SINE Alu -10 302 1 1973 105 14 10 chr17 33375565 33375859 -56128694 - AluSg SINE Alu -15 295 1 1233 248 243 51 chr17 33375859 33376060 -56128493 - L2 LINE L2 -583 2731 2570 1648 150 29 4 chr17 33376060 33376340 -56128213 + AluJb SINE Alu 1 287 -25 1233 248 243 51 chr17 33376340 33376948 -56127605 - L2 LINE L2 -744 2570 1737 183 125 25 25 chr17 33377378 33377418 -56127135 + L3 LINE CR1 1355 1394 -183 268 220 0 0 chr17 33377603 33377653 -56126900 - MER5A DNA MER1_type -1 188 139 1599 196 3 0 chr17 33377846 33378147 -56126406 + AluJb SINE Alu 1 302 -10 2264 82 0 0 chr17 33378257 33378592 -56125961 - AluSg SINE Alu 0 335 1 825 141 122 6 chr17 33378592 33378748 -56125805 - AluSg/x SINE Alu -5 307 134 1539 126 90 4 chr17 33378748 33379025 -56125528 - AluSx SINE Alu -11 301 1 592 321 94 5 chr17 33379158 33379382 -56125171 - MIR SINE MIR -10 252 9 586 150 0 33 chr17 33379614 33379734 -56124819 - AluSg/x SINE Alu -1 309 194 1809 147 3 25 chr17 33379734 33380048 -56124505 - AluSx SINE Alu -5 307 1 2209 111 0 0 chr17 33380050 33380356 -56124197 - AluSg SINE Alu -4 306 1 853 126 0 8 chr17 33380356 33380483 -56124070 - AluSq/x SINE Alu -176 136 11 1143 157 94 35 chr17 33380577 33380832 -56123721 + AluJo SINE Alu 12 281 -31 916 236 56 11 chr17 33381045 33381312 -56123241 + AluJo SINE Alu 19 297 -15 261 83 0 0 chr17 33383077 33383113 -56121440 + (TG)n Simple_repeat Simple_repeat 2 37 0 1308 191 10 41 chr17 33383114 33383408 -56121145 - AluJo SINE Alu -27 285 1 1798 98 0 0 chr17 33384097 33384333 -56120220 - AluSq SINE Alu -77 236 1 2178 86 30 0 chr17 33384475 33384776 -56119777 - AluSx SINE Alu -2 310 1 496 210 0 0 chr17 33384971 33385071 -56119482 - AluJb SINE Alu -5 307 208 234 114 0 91 chr17 33385071 33385115 -56119438 - Alu SINE Alu -262 40 1 2143 113 0 7 chr17 33385294 33385603 -56118950 - AluSg SINE Alu -3 307 1 37 23 0 0 chr17 33386520 33386564 -56117989 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr17 33386684 33386705 -56117848 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 33388185 33388231 -56116322 + (TA)n Simple_repeat Simple_repeat 1 46 0 2042 123 38 0 chr17 33389365 33389657 -56114896 + AluSx SINE Alu 1 303 -9 2154 88 10 10 chr17 33389666 33389963 -56114590 + AluSp SINE Alu 1 297 -16 1537 165 70 0 chr17 33392412 33392685 -56111868 + AluJo SINE Alu 1 292 -20 2371 82 0 0 chr17 33392964 33393257 -56111296 + AluY SINE Alu 1 293 -18 24 0 0 0 chr17 33394258 33394282 -56110271 + AT_rich Low_complexity Low_complexity 1 24 0 2088 121 0 10 chr17 33394848 33395145 -56109408 - AluSq SINE Alu -19 294 1 2353 94 7 0 chr17 33395155 33395462 -56109091 - AluY SINE Alu -2 309 1 22 35 0 0 chr17 33400166 33400195 -56104358 + AT_rich Low_complexity Low_complexity 1 29 0 2058 88 0 0 chr17 33401665 33401927 -56102626 + AluSx SINE Alu 46 307 -5 231 285 265 32 chr17 33403032 33403240 -56101313 + MIR SINE MIR 3 246 -16 675 211 32 32 chr17 33403919 33404075 -56100478 + FRAM SINE Alu 1 156 -10 2181 118 3 0 chr17 33404568 33404865 -56099688 + AluSg SINE Alu 3 300 -10 2062 103 48 0 chr17 33405720 33406012 -56098541 - AluY SINE Alu -5 306 1 291 257 101 37 chr17 33406365 33406474 -56098079 + L2 LINE L2 3149 3264 -8 1063 134 13 0 chr17 33406493 33406701 -56097852 - AluSg/x SINE Alu 0 343 134 2230 112 0 7 chr17 33406701 33407006 -56097547 - AluSg SINE Alu -6 304 2 329 277 24 0 chr17 33407338 33407421 -56097132 - MER102a DNA MER1_type 0 330 246 219 196 78 20 chr17 33407998 33408049 -56096504 + L2 LINE L2 3219 3272 0 1701 129 93 11 chr17 33408317 33408596 -56095957 + AluSx SINE Alu 1 302 -10 930 157 17 45 chr17 33408668 33408822 -56095731 + MER2 DNA MER2_type 4 161 -184 1631 169 16 33 chr17 33408822 33409129 -56095424 - AluJb SINE Alu -10 302 1 2161 120 0 0 chr17 33409138 33409437 -56095116 - AluSc SINE Alu -10 299 1 1070 168 86 19 chr17 33409437 33409646 -56094907 - MER44D DNA MER2_type -116 493 1 1007 123 0 0 chr17 33409686 33409832 -56094721 - AluSg/x SINE Alu -10 300 155 919 139 36 18 chr17 33410122 33410288 -56094265 - AluJb SINE Alu -23 289 121 1553 172 0 38 chr17 33410451 33410741 -56093812 + AluJb SINE Alu 13 291 -21 1545 160 0 8 chr17 33410918 33411156 -56093397 + AluJb SINE Alu 39 274 -38 2281 85 0 22 chr17 33411217 33411533 -56093020 - AluSg1 SINE Alu 0 309 1 2233 119 0 7 chr17 33411665 33411968 -56092585 - AluSg SINE Alu -9 301 1 2244 92 0 0 chr17 33411979 33412311 -56092242 - AluY SINE Alu 0 332 1 1880 89 0 45 chr17 33412735 33413004 -56091549 + AluSx SINE Alu 19 275 -37 1951 126 3 26 chr17 33413007 33413309 -56091244 - AluSc SINE Alu -13 296 2 213 39 0 0 chr17 33413324 33413350 -56091203 + (A)n Simple_repeat Simple_repeat 1 26 0 2076 95 7 17 chr17 33413355 33413650 -56090903 + AluSq SINE Alu 3 294 -19 960 244 106 18 chr17 33413671 33414068 -56090485 - L1ME3 LINE L1 -302 5860 5429 1674 180 0 10 chr17 33414182 33414477 -56090076 + AluJb SINE Alu 1 292 -20 822 253 107 49 chr17 33414522 33414928 -56089625 - L2 LINE L2 0 3313 2883 744 194 8 0 chr17 33414928 33415052 -56089501 + FLAM_A SINE Alu 3 127 -6 2146 89 31 3 chr17 33415070 33415363 -56089190 + AluSp SINE Alu 1 301 -12 2228 105 0 10 chr17 33415410 33415716 -56088837 - AluSc SINE Alu -6 303 1 1878 145 50 7 chr17 33415754 33416051 -56088502 - AluSg SINE Alu 0 310 1 1794 96 36 16 chr17 33416447 33416697 -56087856 - AluSx SINE Alu -4 308 54 28 71 0 0 chr17 33416911 33416967 -56087586 + AT_rich Low_complexity Low_complexity 1 56 0 2179 122 26 0 chr17 33417098 33417401 -56087152 + AluSx SINE Alu 1 311 -1 2423 66 13 7 chr17 33417877 33418179 -56086374 + AluY SINE Alu 1 304 -7 1909 146 34 0 chr17 33418269 33418564 -56085989 + AluJb SINE Alu 1 305 -7 1722 139 59 31 chr17 33418763 33419051 -56085502 - AluJb SINE Alu -16 296 1 2031 153 7 0 chr17 33419059 33419353 -56085200 - AluSx SINE Alu -16 296 1 23 0 0 0 chr17 33419355 33419378 -56085175 + AT_rich Low_complexity Low_complexity 1 23 0 1071 163 59 5 chr17 33419410 33419612 -56084941 - Charlie1a DNA MER1_type -226 1229 1017 * 2838 187 59 3 chr17 33419606 33420178 -56084375 - Charlie1a DNA MER1_type -813 642 39 1111 176 21 16 chr17 33420494 33420687 -56083866 + AluJo SINE Alu 89 282 -30 1868 115 67 4 chr17 33420820 33421090 -56083463 + AluSq SINE Alu 1 287 -26 1616 166 0 80 chr17 33421149 33421475 -56083078 - AluJo SINE Alu -12 300 1 896 211 0 0 chr17 33421594 33421755 -56082798 - FRAM SINE Alu -15 161 1 2162 112 17 3 chr17 33421762 33422057 -56082496 - AluSx SINE Alu -12 300 2 447 19 0 0 chr17 33422057 33422109 -56082444 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 2229 119 0 0 chr17 33422109 33422395 -56082158 - AluSx SINE Alu -26 286 1 2209 125 0 3 chr17 33422442 33422745 -56081808 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 33422745 33422766 -56081787 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1864 133 37 0 chr17 33422766 33423037 -56081516 - AluSg SINE Alu -29 281 1 207 100 0 0 chr17 33423039 33423069 -56081484 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1838 130 14 25 chr17 33423074 33423359 -56081194 - AluJo SINE Alu -30 282 1 2057 140 3 10 chr17 33423626 33423926 -56080627 - AluSq SINE Alu -15 298 1 23 33 0 0 chr17 33424351 33424381 -56080172 + AT_rich Low_complexity Low_complexity 1 30 0 322 270 54 0 chr17 33424409 33424520 -56080033 + L1M4 LINE L1 4605 4721 -1425 230 266 78 16 chr17 33424556 33424620 -56079933 + L2 LINE L2 3203 3270 -2 214 309 24 36 chr17 33425298 33425382 -56079171 - L2 LINE L2 -1 3312 3230 2033 119 14 0 chr17 33425609 33425895 -56078658 - AluSx SINE Alu -18 294 5 1988 134 17 3 chr17 33425913 33426205 -56078348 - AluSx SINE Alu -12 300 5 2211 115 0 3 chr17 33426747 33427042 -56077511 + AluSx SINE Alu 1 294 -18 2307 96 3 3 chr17 33427146 33427448 -56077105 + AluSc SINE Alu 1 302 -7 676 239 8 0 chr17 33427927 33428057 -56076496 - FLAM_A SINE Alu -1 132 2 328 260 147 80 chr17 33428117 33428194 -56076359 + MIR SINE MIR 77 147 -115 1859 159 7 0 chr17 33428194 33428483 -56076070 + AluJo SINE Alu 1 291 -21 328 260 147 80 chr17 33428483 33428555 -56075998 + MIR SINE MIR 147 236 -26 369 198 35 0 chr17 33428674 33428758 -56075795 + AluSp SINE Alu 124 191 -112 1948 131 31 3 chr17 33428816 33429106 -56075447 + AluJb SINE Alu 5 302 -10 899 150 0 8 chr17 33429454 33429587 -56074966 + FLAM_C SINE Alu 1 132 -1 2253 103 7 3 chr17 33429952 33430262 -56074291 - AluSx SINE Alu -1 311 1 241 242 0 16 chr17 33430473 33430535 -56074018 + MIR SINE MIR 152 212 -50 3480 33 0 8 chr17 33430855 33431252 -56073301 - L1PA4 LINE L1 -3 6152 5759 1692 174 7 11 chr17 33431737 33432040 -56072513 + AluJo SINE Alu 1 302 0 942 115 0 8 chr17 33432373 33432495 -56072058 + FLAM_C SINE Alu 1 121 -12 25 0 0 0 chr17 33432500 33432525 -56072028 + AT_rich Low_complexity Low_complexity 1 25 0 2323 101 0 19 chr17 33432562 33432879 -56071674 - AluSx SINE Alu -1 311 1 22 43 0 21 chr17 33432882 33432896 -56071657 + AT_rich Low_complexity Low_complexity 1 14 -32 820 178 0 0 chr17 33432896 33433014 -56071539 - FLAM_C SINE Alu -15 118 1 22 43 0 21 chr17 33433014 33433046 -56071507 + AT_rich Low_complexity Low_complexity 14 46 0 2042 100 50 30 chr17 33433051 33433297 -56071256 + AluSq SINE Alu 1 256 -57 194 81 27 0 chr17 33433297 33433334 -56071219 + (CACTT)n Simple_repeat Simple_repeat 5 42 0 2042 100 50 30 chr17 33433334 33433388 -56071165 + AluSq SINE Alu 256 307 -6 2278 112 0 0 chr17 33433388 33433682 -56070871 + AluSx SINE Alu 1 294 -18 281 95 0 0 chr17 33433682 33433724 -56070829 + L1MA4 LINE L1 6079 6120 -180 1150 127 73 54 chr17 33433724 33433929 -56070624 + AluJo SINE Alu 87 295 -17 1124 108 81 11 chr17 33433931 33434116 -56070437 + L1MA4 LINE L1 6103 6300 0 316 183 77 48 chr17 33434118 33434222 -56070331 - HAL1b LINE L1 -128 1220 1114 2138 132 0 10 chr17 33434530 33434841 -56069712 - AluSg SINE Alu -2 308 1 22 35 0 0 chr17 33434996 33435025 -56069528 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 50 chr17 33435787 33436108 -56068445 + AluSq SINE Alu 1 305 -8 364 239 84 59 chr17 33436173 33436412 -56068141 + L1ME3A LINE L1 895 1139 -4980 226 267 40 50 chr17 33436541 33436642 -56067911 + MLT1J LTR MaLR 110 209 -302 345 200 178 0 chr17 33436683 33436773 -56067780 + MLT1L LTR MaLR 340 445 -170 2170 108 3 46 chr17 33436793 33437118 -56067435 - AluSq SINE Alu -2 311 1 1035 90 0 8 chr17 33437122 33437255 -56067298 - AluSq/x SINE Alu -180 132 1 533 309 104 30 chr17 33437280 33437779 -56066774 - L1 LINE L1 -914 5232 4697 932 136 0 0 chr17 33437811 33437936 -56066617 - FLAM_C SINE Alu -18 125 1 1999 168 0 0 chr17 33438012 33438322 -56066231 - AluJb SINE Alu -2 310 1 1958 161 7 0 chr17 33438519 33438817 -56065736 - AluJb SINE Alu -11 301 2 1634 101 3 80 chr17 33438856 33439103 -56065450 - L1PA16 LINE L1 -110 6056 5832 2116 99 26 26 chr17 33439103 33439415 -56065138 - AluSx SINE Alu 0 312 1 1634 101 3 80 chr17 33439415 33439455 -56065098 - L1PA16 LINE L1 -334 5832 5791 317 313 112 27 chr17 33439507 33439731 -56064822 + L1ME3A LINE L1 2192 2434 -3695 465 273 88 71 chr17 33439846 33439973 -56064580 + L1ME3A LINE L1 5476 5599 -554 2384 106 0 0 chr17 33439973 33440275 -56064278 + AluSx SINE Alu 3 304 -8 465 273 88 71 chr17 33440275 33440564 -56063989 + L1ME3A LINE L1 5599 5838 -315 21 36 0 0 chr17 33440720 33440748 -56063805 + AT_rich Low_complexity Low_complexity 1 28 0 1701 128 124 0 chr17 33440755 33441020 -56063533 + AluSx SINE Alu 1 298 -4 1340 135 90 132 chr17 33441085 33441396 -56063157 - AluJo SINE Alu -10 302 5 2387 239 68 55 chr17 33441454 33442457 -56062096 - HAL1b LINE L1 -270 1078 60 2447 80 0 10 chr17 33442457 33442769 -56061784 - AluSc SINE Alu 0 309 1 2387 239 68 55 chr17 33442769 33442830 -56061723 - HAL1b LINE L1 -1288 60 1 2365 97 0 0 chr17 33442950 33443249 -56061304 + AluSx SINE Alu 1 299 -13 233 257 129 0 chr17 33443350 33443420 -56061133 - HAL1 LINE L1 -856 1651 1573 1964 153 0 25 chr17 33443425 33443745 -56060808 - AluJb SINE Alu 0 312 1 22 0 0 0 chr17 33443759 33443781 -56060772 + AT_rich Low_complexity Low_complexity 1 22 0 379 245 115 46 chr17 33443787 33444048 -56060505 - HAL1 LINE L1 -1415 1092 814 2213 118 0 0 chr17 33444295 33444583 -56059970 - AluSx SINE Alu -24 288 1 380 258 40 96 chr17 33444698 33444734 -56059819 + L1MEd LINE L1 3056 3092 -3037 1761 61 0 9 chr17 33444734 33444946 -56059607 + AluY SINE Alu 1 210 -101 380 258 40 96 chr17 33444946 33444974 -56059579 + L1MEd LINE L1 3092 3120 -3009 1407 183 30 50 chr17 33444974 33445275 -56059278 + AluJo SINE Alu 1 295 -17 380 258 40 96 chr17 33445275 33445511 -56059042 + L1MEd LINE L1 3120 3340 -2789 24 0 0 0 chr17 33445511 33445535 -56059018 + AT_rich Low_complexity Low_complexity 1 24 0 791 119 0 98 chr17 33445535 33445560 -56058993 - FLAM_C SINE Alu -173 129 103 1972 137 7 0 chr17 33445560 33445838 -56058715 + AluSx SINE Alu 1 280 -32 341 0 45 0 chr17 33445838 33445882 -56058671 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 791 119 0 98 chr17 33445882 33445998 -56058555 - FLAM_C SINE Alu -197 105 1 263 115 0 19 chr17 33446080 33446098 -56058455 + (GAA)n Simple_repeat Simple_repeat 2 19 -33 866 132 16 0 chr17 33446098 33446227 -56058326 + FLAM_C SINE Alu 3 133 0 263 115 0 19 chr17 33446227 33446260 -56058293 + (GAA)n Simple_repeat Simple_repeat 19 52 0 2177 97 7 17 chr17 33446274 33446603 -56057950 + AluSq SINE Alu 1 326 0 23 78 0 0 chr17 33446913 33446964 -56057589 + AT_rich Low_complexity Low_complexity 1 51 0 2026 138 3 3 chr17 33447080 33447378 -56057175 + AluSx SINE Alu 1 298 -14 1138 124 0 0 chr17 33447380 33447541 -56057012 + AluSg/x SINE Alu 150 310 0 22 0 0 0 chr17 33447545 33447567 -56056986 + AT_rich Low_complexity Low_complexity 1 22 0 1031 91 12 48 chr17 33447659 33447824 -56056729 - AluSp/q SINE Alu -1 312 154 43 99 0 0 chr17 33447934 33448075 -56056478 + AT_rich Low_complexity Low_complexity 1 141 0 304 191 0 0 chr17 33448079 33448142 -56056411 - FLAM_A SINE Alu 0 133 71 1444 118 10 10 chr17 33448145 33448348 -56056205 - AluSx SINE Alu -109 203 1 407 226 113 16 chr17 33448352 33448476 -56056077 + L2 LINE L2 3178 3313 0 1998 142 14 3 chr17 33448489 33448814 -56055739 + AluSx SINE Alu 1 328 0 697 199 138 69 chr17 33448826 33449032 -56055521 + AluJo SINE Alu 50 277 -35 2468 97 0 0 chr17 33449032 33449342 -56055211 + AluSg SINE Alu 1 310 0 697 199 138 69 chr17 33449342 33449381 -56055172 + AluJo SINE Alu 277 312 0 1849 140 186 14 chr17 33449444 33449809 -56054744 + MSTA LTR MaLR 1 428 0 9350 137 25 38 chr17 33449811 33451409 -56053144 + MSTA-int LTR MaLR 3 1580 0 1837 134 171 45 chr17 33451409 33451716 -56052837 + MSTA LTR MaLR 1 366 -62 2189 126 3 0 chr17 33451716 33452017 -56052536 - AluSx SINE Alu -10 302 1 1837 134 171 45 chr17 33452017 33452089 -56052464 + MSTA LTR MaLR 366 428 0 497 309 24 6 chr17 33452094 33452259 -56052294 + L1MEd LINE L1 220 387 -5732 1291 133 69 39 chr17 33452392 33452433 -56052120 - MSTA LTR MaLR 0 426 388 2201 128 0 7 chr17 33452433 33452739 -56051814 + AluSx SINE Alu 1 304 -8 1291 133 69 39 chr17 33452739 33452930 -56051623 - MSTA LTR MaLR -38 388 187 246 87 0 0 chr17 33452939 33452985 -56051568 - LTR66 LTR ERVL -171 439 394 243 146 0 0 chr17 33452985 33453026 -56051527 + (TA)n Simple_repeat Simple_repeat 1 41 0 2432 92 0 3 chr17 33453026 33453329 -56051224 - AluSc SINE Alu -7 302 1 29 0 0 0 chr17 33453334 33453363 -56051190 + AT_rich Low_complexity Low_complexity 1 29 0 1399 129 0 0 chr17 33453370 33453556 -56050997 - AluSq SINE Alu -127 186 1 1344 121 15 0 chr17 33453557 33453755 -56050798 - MSTA LTR MaLR -227 201 1 634 261 63 8 chr17 33453862 33454115 -56050438 + L1MEd LINE L1 638 904 -5215 26 74 0 0 chr17 33454143 33454197 -56050356 + AT_rich Low_complexity Low_complexity 1 54 0 2329 83 3 0 chr17 33454199 33454489 -56050064 + AluSp SINE Alu 3 293 -20 21 36 0 0 chr17 33454527 33454555 -56049998 + AT_rich Low_complexity Low_complexity 1 28 0 1277 166 64 58 chr17 33454582 33454647 -56049906 - Charlie1b DNA MER1_type -2446 315 252 2443 49 7 0 chr17 33454647 33454932 -56049621 - AluY SINE Alu -24 287 1 1277 166 64 58 chr17 33454932 33455179 -56049374 - Charlie1b DNA MER1_type -2509 252 1 257 337 0 0 chr17 33455180 33455272 -56049281 - MIR3 SINE MIR -49 159 68 48 0 0 0 chr17 33455408 33455456 -56049097 + AT_rich Low_complexity Low_complexity 1 48 0 2125 116 0 17 chr17 33456419 33456559 -56047994 + AluSx SINE Alu 1 142 -170 189 0 0 0 chr17 33456559 33456580 -56047973 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2125 116 0 17 chr17 33456580 33456741 -56047812 + AluSx SINE Alu 142 297 -15 276 276 28 21 chr17 33456748 33456893 -56047660 + L1MEd LINE L1 955 1100 -5019 1089 158 187 26 chr17 33456902 33457175 -56047378 - MER33 DNA MER1_type -7 317 1 460 241 41 28 chr17 33457175 33457320 -56047233 + L1MEd LINE L1 1110 1256 -4863 313 204 102 10 chr17 33457424 33457522 -56047031 + HAL1 LINE L1 1530 1636 -871 487 76 0 152 chr17 33457776 33457835 -56046718 + MER41D LTR ERV1 2 44 -513 2343 95 0 0 chr17 33457835 33458130 -56046423 - AluSq SINE Alu -18 295 1 487 76 0 152 chr17 33458130 33458162 -56046391 + MER41D LTR ERV1 44 79 -478 2216 101 0 3 chr17 33458166 33458454 -56046099 + AluSq SINE Alu 7 293 -20 1230 101 25 0 chr17 33458454 33458613 -56045940 + AluSp SINE Alu 134 296 -17 2783 146 15 40 chr17 33458617 33459095 -56045458 + MER41D LTR ERV1 92 557 0 2175 114 7 0 chr17 33459424 33459730 -56044823 + AluSp SINE Alu 1 308 -5 211 261 72 112 chr17 33459876 33459962 -56044591 - MIR SINE MIR -2 260 172 638 207 66 0 chr17 33459962 33460083 -56044470 + FLAM_A SINE Alu 1 129 -4 211 261 72 112 chr17 33460083 33460113 -56044440 - MIR SINE MIR -90 172 142 494 102 0 136 chr17 33460113 33460177 -56044376 - L1MB3 LINE L1 -7 6176 6134 2238 118 0 9 chr17 33460177 33460492 -56044061 + AluSx SINE Alu 1 312 0 494 102 0 136 chr17 33460492 33460545 -56044008 - L1MB3 LINE L1 -49 6134 6075 211 261 72 112 chr17 33460545 33460676 -56043877 - MIR SINE MIR -120 142 22 1836 125 6 83 chr17 33460739 33460883 -56043670 + AluJo SINE Alu 1 155 -157 2341 85 0 0 chr17 33460883 33461176 -56043377 + AluY SINE Alu 6 298 -13 1836 125 6 83 chr17 33461176 33461333 -56043220 + AluJo SINE Alu 155 276 -36 2265 106 3 0 chr17 33461333 33461625 -56042928 - AluSx SINE Alu -19 293 1 1836 125 6 83 chr17 33461625 33461658 -56042895 + AluJo SINE Alu 276 310 -2 29 28 0 0 chr17 33461659 33461695 -56042858 + AT_rich Low_complexity Low_complexity 1 36 0 217 326 41 62 chr17 33461710 33462028 -56042525 - L2 LINE L2 -168 3145 2782 267 81 0 27 chr17 33462289 33462326 -56042227 - Alu SINE Alu -254 48 13 342 232 24 0 chr17 33462330 33462412 -56042141 - MIR SINE MIR -110 152 69 2230 107 0 7 chr17 33462501 33462791 -56041762 - AluSg SINE Alu -22 288 1 2288 117 6 3 chr17 33463596 33463930 -56040623 + MER1B DNA MER1_type 3 337 0 1374 102 16 0 chr17 33463995 33464181 -56040372 - AluJo SINE Alu -118 194 6 278 339 31 16 chr17 33464185 33464312 -56040241 - L3 LINE CR1 -36 1541 1413 195 310 95 32 chr17 33464506 33464664 -56039889 - L3 LINE CR1 -157 1420 1253 240 143 0 0 chr17 33464713 33464755 -56039798 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 203 215 15 46 chr17 33465425 33465490 -56039063 + (CGG)n Simple_repeat Simple_repeat 1 63 0 24 32 0 0 chr17 33465567 33465598 -56038955 + GC_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 33465675 33465696 -56038857 + GC_rich Low_complexity Low_complexity 1 21 0 2332 113 0 0 chr17 33468813 33469123 -56035430 - AluSg SINE Alu 0 310 1 2186 107 3 28 chr17 33469300 33469617 -56034936 - AluSq SINE Alu -4 309 1 687 233 78 5 chr17 33469625 33469818 -56034735 - MIR SINE MIR -42 220 14 2006 152 0 0 chr17 33470067 33470356 -56034197 + AluJo SINE Alu 1 289 -23 1308 161 0 0 chr17 33471013 33471205 -56033348 - AluSq SINE Alu -121 192 1 2167 95 0 39 chr17 33471205 33471511 -56033042 - AluSx SINE Alu -18 294 1 671 158 0 47 chr17 33471724 33471851 -56032702 + FLAM_C SINE Alu 5 125 -18 1265 181 4 9 chr17 33471867 33472093 -56032460 + AluJb SINE Alu 86 310 -2 1794 163 33 0 chr17 33472677 33472974 -56031579 - AluJb SINE Alu 0 306 1 912 181 94 0 chr17 33473024 33473195 -56031358 + MER58A DNA MER1_type 38 224 0 1047 287 161 39 chr17 33473282 33473996 -56030557 + L3 LINE CR1 522 1322 -255 434 262 55 48 chr17 33476260 33476405 -56028148 - L2 LINE L2 -16 3297 3152 2628 53 0 3 chr17 33476808 33477110 -56027443 + AluY SINE Alu 3 303 -8 2210 116 0 10 chr17 33477317 33477483 -56027070 - AluSq SINE Alu -13 300 137 2415 62 0 7 chr17 33477483 33477775 -56026778 - AluY SINE Alu -21 290 1 2210 116 0 10 chr17 33477775 33477911 -56026642 - AluSq SINE Alu -176 137 1 1897 155 14 0 chr17 33478184 33478480 -56026073 - AluJb SINE Alu -12 300 1 2316 104 0 0 chr17 33478746 33479043 -56025510 - AluSg SINE Alu -13 297 1 272 188 29 14 chr17 33479784 33479853 -56024700 + L2 LINE L2 2996 3065 -248 1065 132 11 40 chr17 33479882 33480056 -56024497 + AluSg/x SINE Alu 126 294 -18 246 62 0 0 chr17 33480056 33480088 -56024465 + (TA)n Simple_repeat Simple_repeat 2 33 0 1557 172 20 0 chr17 33480214 33480331 -56024222 - AluJb SINE Alu -63 249 136 225 0 0 0 chr17 33480331 33480356 -56024197 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1557 172 20 0 chr17 33480356 33480482 -56024071 - AluJb SINE Alu -176 136 1 1617 124 151 0 chr17 33480613 33480871 -56023682 - AluSx SINE Alu -5 297 1 1597 197 3 10 chr17 33481009 33481303 -56023250 - AluJo SINE Alu -18 294 3 2128 75 65 0 chr17 33481437 33481715 -56022838 + AluY SINE Alu 1 296 -15 2281 98 0 3 chr17 33482026 33482321 -56022232 - AluSg SINE Alu -16 294 1 1456 118 15 0 chr17 33482339 33482543 -56022010 + AluSq SINE Alu 104 310 -3 2318 108 0 3 chr17 33483626 33483932 -56020621 - AluSp SINE Alu -8 305 1 29 0 0 0 chr17 33484291 33484320 -56020233 + AT_rich Low_complexity Low_complexity 1 29 0 714 75 47 9 chr17 33484320 33484426 -56020127 - HY1 scRNA scRNA -1 111 2 1957 144 29 0 chr17 33486059 33486357 -56018196 - AluSx SINE Alu 0 306 1 318 138 154 0 chr17 33486430 33486495 -56018058 + MER116 DNA Mariner 1 75 -5 3607 153 105 38 chr17 33486504 33486636 -56017917 - L1MB7 LINE L1 -2 6182 6060 2201 120 0 3 chr17 33486636 33486935 -56017618 + AluSx SINE Alu 1 298 -14 2174 125 0 3 chr17 33486944 33487241 -56017312 - AluSx SINE Alu -16 296 1 3607 153 105 38 chr17 33487241 33487871 -56016682 - L1MB7 LINE L1 -131 6053 5467 238 33 0 0 chr17 33487871 33487901 -56016652 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2044 108 7 0 chr17 33487901 33488187 -56016366 - AluSg SINE Alu -22 288 1 2256 89 7 0 chr17 33488187 33488490 -56016063 - AluSx SINE Alu -7 305 1 3607 153 105 38 chr17 33488490 33488548 -56016005 - L1MB7 LINE L1 -716 5468 5311 1059 154 0 21 chr17 33488551 33488739 -56015814 - AluJo SINE Alu -11 301 118 2529 121 41 0 chr17 33488751 33489164 -56015389 - L1PA13 LINE L1 0 6163 5734 1203 192 46 7 chr17 33489164 33489458 -56015095 - L1MB7 LINE L1 -872 5274 4966 395 215 127 51 chr17 33490775 33490933 -56013620 + MIR SINE MIR 24 193 -69 1913 150 26 7 chr17 33490943 33491249 -56013304 - AluJb SINE Alu 0 312 1 1693 121 85 18 chr17 33491249 33491531 -56013022 - AluSg SINE Alu -9 301 1 268 306 10 10 chr17 33492235 33492333 -56012220 + L1ME LINE L1 5729 5826 -295 190 232 72 130 chr17 33492742 33492821 -56011732 + MIR3 SINE MIR 30 99 -109 1425 169 35 24 chr17 33492821 33493111 -56011442 - AluJb SINE Alu -18 294 2 190 232 72 130 chr17 33493111 33493169 -56011384 + MIR3 SINE MIR 99 159 -49 1891 121 0 54 chr17 33493170 33493484 -56011069 - AluSx SINE Alu -15 297 1 2099 108 3 0 chr17 33493486 33493781 -56010772 - AluSx SINE Alu -16 296 1 195 42 0 0 chr17 33493781 33493805 -56010748 + (T)n Simple_repeat Simple_repeat 1 24 0 2051 97 7 10 chr17 33493818 33494116 -56010437 + AluSx SINE Alu 1 297 -15 1044 181 19 9 chr17 33494141 33494227 -56010326 - AluJo SINE Alu -91 221 137 2035 107 0 20 chr17 33494227 33494526 -56010027 - AluSp SINE Alu -19 294 2 1044 181 19 9 chr17 33494526 33494654 -56009899 - AluJo SINE Alu -175 137 5 228 184 61 0 chr17 33494661 33494710 -56009843 + MIR3 SINE MIR 156 207 -1 1361 134 117 40 chr17 33545521 33545820 -55958733 + MER33 DNA MER1_type 1 322 -2 1904 99 39 0 chr17 33546948 33547231 -55957322 - AluSx SINE Alu -18 294 1 2454 67 3 10 chr17 33547447 33547759 -55956794 - AluSq SINE Alu -3 310 1 22 56 0 0 chr17 33548883 33548919 -55955634 + GC_rich Low_complexity Low_complexity 1 36 0 25 95 0 0 chr17 33549053 33549127 -55955426 + GC_rich Low_complexity Low_complexity 1 74 0 299 216 0 52 chr17 33549296 33549393 -55955160 + G-rich Low_complexity Low_complexity 6 97 0 291 54 0 0 chr17 33549429 33549466 -55955087 + (CCG)n Simple_repeat Simple_repeat 1 37 0 35 63 0 0 chr17 33549484 33549547 -55955006 + GC_rich Low_complexity Low_complexity 1 63 0 309 205 13 73 chr17 33549714 33549865 -55954688 + G-rich Low_complexity Low_complexity 2 143 0 21 57 0 0 chr17 33550001 33550036 -55954517 + GC_rich Low_complexity Low_complexity 1 35 0 1601 151 0 75 chr17 33559577 33559896 -55944657 + AluJo SINE Alu 4 298 -14 244 237 21 43 chr17 33560789 33560882 -55943671 + MIR SINE MIR 23 113 -95 1951 112 49 0 chr17 33561346 33561632 -55942921 + AluSg SINE Alu 1 300 -10 889 138 23 0 chr17 33561644 33561774 -55942779 + FLAM_A SINE Alu 1 133 0 2295 94 0 0 chr17 33561777 33562085 -55942468 + AluSg SINE Alu 1 308 -2 1727 176 0 19 chr17 33562100 33562418 -55942135 + AluJb SINE Alu 1 312 0 2351 76 0 10 chr17 33563148 33563452 -55941101 + AluY SINE Alu 1 301 -10 858 140 100 0 chr17 33563461 33563611 -55940942 + L1MB5 LINE L1 5577 5741 -433 232 27 54 0 chr17 33563614 33563651 -55940902 + (ATG)n Simple_repeat Simple_repeat 3 41 0 4466 133 50 67 chr17 33563655 33564566 -55939987 + MER21A LTR ERV1 29 924 -7 2180 169 51 14 chr17 33564572 33564986 -55939567 + L1MB5 LINE L1 5738 6166 -8 243 360 101 55 chr17 33567119 33567594 -55936959 + L2 LINE L2 2247 2743 -571 373 282 193 3 chr17 33568158 33568360 -55936193 + L1MCa LINE L1 1445 1607 -4991 855 163 0 0 chr17 33568360 33568489 -55936064 + AluJo SINE Alu 1 129 -173 373 282 193 3 chr17 33568489 33568505 -55936048 + L1MCa LINE L1 1607 1871 -4727 541 290 74 57 chr17 33568863 33569226 -55935327 + L1MCa LINE L1 2227 2649 -3958 966 204 0 0 chr17 33569259 33569421 -55935132 + AluJo SINE Alu 138 299 -3 1727 169 0 38 chr17 33569540 33569853 -55934700 + AluJb SINE Alu 1 301 -11 416 321 103 18 chr17 33569875 33570040 -55934513 + L1MCa LINE L1 2937 3115 -3311 1274 222 46 82 chr17 33570060 33570316 -55934237 + MLT1A2 LTR MaLR 1 265 -109 2262 97 0 0 chr17 33570316 33570616 -55933937 - AluSg SINE Alu -9 301 2 1274 222 46 82 chr17 33570616 33570703 -55933850 + MLT1A2 LTR MaLR 265 331 -43 1931 139 0 3 chr17 33570703 33570998 -55933555 - AluSx SINE Alu -18 294 1 1274 222 46 82 chr17 33570998 33571041 -55933512 + MLT1A2 LTR MaLR 331 374 0 405 254 178 27 chr17 33571067 33571252 -55933301 - MIR SINE MIR -48 214 2 275 300 0 0 chr17 33571326 33571406 -55933147 + L2 LINE L2 3234 3313 0 2120 73 0 14 chr17 33571999 33572274 -55932279 - AluSc SINE Alu -3 306 36 457 303 113 10 chr17 33572393 33572588 -55931965 - MIR SINE MIR -13 249 35 203 259 19 0 chr17 33573571 33573625 -55930928 + CT-rich Low_complexity Low_complexity 3 57 0 1366 189 64 14 chr17 33573648 33573928 -55930625 - AluJo SINE Alu -18 294 1 2125 110 3 3 chr17 33574441 33574742 -55929811 + AluSq SINE Alu 1 301 -12 384 279 81 81 chr17 33575409 33575606 -55928947 + L2 LINE L2 3112 3308 -5 556 130 11 11 chr17 33576242 33576334 -55928219 - AluJo SINE Alu -4 308 217 841 136 49 49 chr17 33576335 33576382 -55928171 - AluJo SINE Alu -143 169 123 2153 131 3 0 chr17 33576382 33576688 -55927865 + AluSg1 SINE Alu 1 307 -2 841 136 49 49 chr17 33576688 33576802 -55927751 - AluJo SINE Alu -188 124 8 21 0 0 0 chr17 33576840 33576861 -55927692 + AT_rich Low_complexity Low_complexity 1 21 0 476 265 164 27 chr17 33577296 33577515 -55927038 + MIR SINE MIR 9 257 -5 1361 189 82 0 chr17 33577738 33578008 -55926545 - AluJo SINE Alu -20 292 1 424 219 103 84 chr17 33579886 33580041 -55924512 - MER5B DNA MER1_type 0 178 21 349 272 160 0 chr17 33580609 33580734 -55923819 - L2 LINE L2 -1 3271 3127 200 208 0 21 chr17 33581797 33581845 -55922708 + GA-rich Low_complexity Low_complexity 4 50 0 212 275 12 0 chr17 33581886 33581966 -55922587 + (CGG)n Simple_repeat Simple_repeat 2 82 0 23 0 0 0 chr17 33582307 33582330 -55922223 + AT_rich Low_complexity Low_complexity 1 23 0 925 134 0 0 chr17 33584085 33584219 -55920334 + AluSg SINE Alu 1 134 -176 2265 110 0 0 chr17 33584219 33584529 -55920024 + AluSg SINE Alu 1 310 0 2434 54 3 0 chr17 33585241 33585538 -55919015 - AluY SINE Alu -13 298 1 204 339 0 0 chr17 33585644 33585703 -55918850 + GA-rich Low_complexity Low_complexity 4 62 0 271 312 128 8 chr17 33585729 33585854 -55918699 - MIR3 SINE MIR -49 159 20 1212 147 88 0 chr17 33586034 33586238 -55918315 + AluJb SINE Alu 85 306 -6 593 269 16 58 chr17 33586244 33586486 -55918067 + MIR SINE MIR 30 261 -1 1825 141 3 39 chr17 33586816 33586985 -55917568 - AluJo SINE Alu -11 301 146 2218 90 10 0 chr17 33586985 33587284 -55917269 - AluSg SINE Alu -8 302 1 1825 141 3 39 chr17 33587284 33587426 -55917127 - AluJo SINE Alu -166 146 1 312 53 0 0 chr17 33587993 33588031 -55916522 - U2 snRNA snRNA -150 38 1 501 333 94 27 chr17 33588289 33588692 -55915861 + L2 LINE L2 2826 3255 -17 852 213 0 0 chr17 33589088 33589243 -55915310 - AluJb SINE Alu -24 288 134 1841 166 10 19 chr17 33589934 33590242 -55914311 + AluJo SINE Alu 1 305 -7 2337 95 0 0 chr17 33590263 33590559 -55913994 - AluSg SINE Alu -14 296 1 309 109 0 0 chr17 33590857 33590903 -55913650 + (TG)n Simple_repeat Simple_repeat 2 47 0 1697 209 61 29 chr17 33590929 33591418 -55913135 + MLT1D LTR MaLR 1 505 0 319 219 137 68 chr17 33592577 33592782 -55911771 + MIR SINE MIR 35 253 -9 1960 156 0 0 chr17 33592940 33593228 -55911325 + AluJo SINE Alu 1 288 -24 22 0 0 0 chr17 33593228 33593250 -55911303 + AT_rich Low_complexity Low_complexity 1 22 0 488 306 76 52 chr17 33593391 33593773 -55910780 + MLT1K LTR MaLR 39 429 -159 2578 47 10 0 chr17 33594867 33595166 -55909387 + AluY SINE Alu 1 302 -9 347 313 137 18 chr17 33595601 33596191 -55908362 + L2 LINE L2 2216 2953 -361 27 33 0 50 chr17 33596563 33596603 -55907950 + AT_rich Low_complexity Low_complexity 1 39 -18 1764 171 0 20 chr17 33596603 33596895 -55907658 - AluJo SINE Alu -26 286 1 27 33 0 50 chr17 33596895 33596914 -55907639 + AT_rich Low_complexity Low_complexity 39 57 0 2248 84 0 18 chr17 33597887 33598199 -55906354 + AluSg SINE Alu 1 307 0 2399 97 0 6 chr17 33598445 33598756 -55905797 - AluSx SINE Alu -3 309 1 1307 170 23 5 chr17 33599682 33599900 -55904653 + MER58A DNA MER1_type 1 222 -2 606 229 18 12 chr17 33600425 33600595 -55903958 + MER104 DNA Tc2 3 173 -7 1736 159 0 60 chr17 33600704 33601019 -55903534 - AluJo SINE Alu -16 296 1 3510 80 2 14 chr17 33601061 33601548 -55903005 + L1PA10 LINE L1 5688 6168 0 737 145 0 0 chr17 33601579 33601696 -55902857 + FLAM_C SINE Alu 1 117 -16 423 0 0 0 chr17 33601696 33601743 -55902810 + (CA)n Simple_repeat Simple_repeat 2 48 0 1639 194 167 29 chr17 33601803 33602247 -55902306 - MLT1D LTR MaLR 0 505 1 4695 168 40 18 chr17 33602381 33602481 -55902072 + L1MB8 LINE L1 5103 5199 -979 1953 120 63 0 chr17 33602481 33602765 -55901788 + AluSx SINE Alu 1 302 -10 4695 168 40 18 chr17 33602765 33603061 -55901492 + L1MB8 LINE L1 5199 5487 -691 2412 93 7 0 chr17 33603061 33603362 -55901191 + AluSx SINE Alu 1 303 -9 4695 168 40 18 chr17 33603362 33604020 -55900533 + L1MB8 LINE L1 5487 6172 -6 202 272 37 25 chr17 33604090 33604171 -55900382 + MIR SINE MIR 181 262 0 284 269 172 0 chr17 33605215 33605349 -55899204 + L3 LINE CR1 1419 1575 -2 2589 62 0 0 chr17 33605362 33605668 -55898885 + AluY SINE Alu 1 306 -5 2293 75 7 0 chr17 33605712 33606051 -55898502 + AluY SINE Alu 1 341 0 2308 99 0 0 chr17 33606218 33606510 -55898043 - AluSx SINE Alu -20 292 1 1857 137 30 47 chr17 33606519 33606818 -55897735 - AluJb SINE Alu -18 294 1 538 291 80 8 chr17 33607571 33607808 -55896745 + MIR SINE MIR 9 262 0 1641 160 31 27 chr17 33609327 33609621 -55894932 - AluJo SINE Alu -12 300 6 324 271 84 39 chr17 33609707 33609862 -55894691 - MIR SINE MIR -4 258 97 410 277 123 0 chr17 33609950 33610080 -55894473 - L3 LINE CR1 -3 1574 1429 2014 133 0 10 chr17 33610090 33610383 -55894170 + AluSx SINE Alu 7 296 -16 1681 147 13 36 chr17 33610556 33610862 -55893691 + AluJo SINE Alu 1 299 -13 2325 112 3 0 chr17 33611125 33611430 -55893123 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 33611433 33611455 -55893098 + AT_rich Low_complexity Low_complexity 1 22 0 1762 168 3 10 chr17 33611511 33611808 -55892745 - AluJo SINE Alu -13 299 5 244 249 41 23 chr17 33612126 33612241 -55892312 + MIR SINE MIR 69 180 -61 609 64 0 0 chr17 33612275 33612353 -55892200 - MLT2A2 LTR ERVL -375 78 1 2048 120 0 0 chr17 33612517 33612792 -55891761 - AluSx SINE Alu -13 299 25 1356 186 115 4 chr17 33613130 33613399 -55891154 + AluJo SINE Alu 1 299 -13 267 31 0 0 chr17 33613972 33614004 -55890549 + (CA)n Simple_repeat Simple_repeat 1 32 0 374 224 138 17 chr17 33614166 33614282 -55890271 + L2 LINE L2 3184 3313 0 1835 167 10 3 chr17 33614490 33614790 -55889763 - AluJb SINE Alu -10 302 1 522 31 0 0 chr17 33614817 33614881 -55889672 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 263 354 71 0 chr17 33615017 33615130 -55889423 - L2 LINE L2 -27 3245 3125 801 179 0 8 chr17 33615358 33615524 -55889029 + FLAM_C SINE Alu 1 165 0 264 345 95 0 chr17 33615753 33615901 -55888652 - L2 LINE L2 -229 3043 2882 236 309 108 35 chr17 33616001 33616315 -55888238 + L2 LINE L2 1980 2316 -998 32 26 0 0 chr17 33616857 33616896 -55887657 + AT_rich Low_complexity Low_complexity 1 39 0 740 313 84 31 chr17 33617084 33617570 -55886983 + L1ME LINE L1 5265 5776 -345 548 275 194 22 chr17 33618184 33618555 -55885998 + L2 LINE L2 2872 3306 -7 884 144 8 0 chr17 33618956 33619088 -55885465 - FLAM_C SINE Alu 0 133 1 2156 84 38 3 chr17 33619526 33619813 -55884740 - AluSq SINE Alu -16 297 1 1133 152 19 43 chr17 33619895 33620106 -55884447 - AluJb SINE Alu -5 307 102 354 250 13 0 chr17 33620106 33620182 -55884371 - MER58B DNA MER1_type -6 335 259 603 117 32 0 chr17 33620202 33620296 -55884257 + MER58 DNA MER1_type 121 217 -2203 664 159 22 29 chr17 33620336 33620474 -55884079 - MER58 DNA MER1_type -124 217 81 729 301 26 4 chr17 33621220 33621449 -55883104 + MIR SINE MIR 29 262 0 2196 145 5 75 chr17 33621686 33622101 -55882452 + MER57A LTR ERV1 3 388 -15 2354 85 3 3 chr17 33622380 33622675 -55881878 + AluSg SINE Alu 2 296 -14 450 0 0 0 chr17 33622933 33622983 -55881570 + (TA)n Simple_repeat Simple_repeat 2 51 0 1332 125 23 28 chr17 33623709 33623925 -55880628 - AluSq SINE Alu -15 298 84 434 221 83 69 chr17 33624053 33624207 -55880346 - L1ME LINE L1 -311 5810 5651 1859 136 51 17 chr17 33624207 33624502 -55880051 - AluJb SINE Alu -5 307 3 434 221 83 69 chr17 33624502 33624551 -55880002 - L1ME LINE L1 -470 5651 5604 249 287 96 48 chr17 33624680 33624889 -55879664 - L1ME LINE L1 -535 5586 5368 2255 116 0 22 chr17 33624936 33625255 -55879298 - AluSx SINE Alu 0 312 1 288 328 32 24 chr17 33626310 33626435 -55878118 - L2 LINE L2 -49 3223 3098 2154 121 0 3 chr17 33626746 33627043 -55877510 - AluSx SINE Alu -16 296 1 2069 110 14 14 chr17 33627476 33627766 -55876787 - AluSx SINE Alu -22 290 1 282 315 70 29 chr17 33628045 33628286 -55876267 - L2 LINE L2 -218 3054 2804 2707 33 3 0 chr17 33628579 33628884 -55875669 - AluY SINE Alu -5 306 1 377 294 0 34 chr17 33629238 33629357 -55875196 + L2 LINE L2 3199 3313 0 342 335 92 5 chr17 33629412 33629630 -55874923 - MIR SINE MIR -6 256 20 180 0 0 0 chr17 33630223 33630243 -55874310 + (A)n Simple_repeat Simple_repeat 1 20 0 387 222 102 28 chr17 33630597 33630705 -55873848 + MER94 DNA DNA 16 131 -3 224 368 40 26 chr17 33630952 33631104 -55873449 + L2 LINE L2 3119 3272 0 263 347 125 8 chr17 33631941 33632189 -55872364 + L3b LINE CR1 1281 1557 -26 2282 64 43 0 chr17 33632411 33632692 -55871861 - AluY SINE Alu -18 293 1 756 276 202 14 chr17 33634331 33635122 -55869431 + L2 LINE L2 2339 3297 -16 552 273 70 55 chr17 33635416 33635557 -55868996 - HAL1b LINE L1 -714 1793 1656 1861 169 0 16 chr17 33635557 33635865 -55868688 - AluJo SINE Alu -9 303 1 552 273 70 55 chr17 33635865 33635887 -55868666 - HAL1b LINE L1 -851 1656 1636 2482 62 0 3 chr17 33635887 33636192 -55868361 - AluY SINE Alu -7 304 1 552 273 70 55 chr17 33636192 33636323 -55868230 - HAL1b LINE L1 -871 1636 418 566 269 19 53 chr17 33636846 33637054 -55867499 + MIR SINE MIR 7 207 -55 195 42 0 0 chr17 33638692 33638716 -55865837 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1521 152 0 86 chr17 33638716 33639006 -55865547 - AluJo SINE Alu -32 280 16 2017 137 0 3 chr17 33639009 33639309 -55865244 + AluSx SINE Alu 1 299 -13 925 141 0 47 chr17 33639309 33639473 -55865080 - AluJo SINE Alu -164 148 1 2565 62 0 3 chr17 33639775 33640080 -55864473 - AluY SINE Alu -7 304 1 200 336 35 35 chr17 33640964 33641080 -55863473 + L2 LINE L2 2794 2909 -405 1944 150 10 19 chr17 33641096 33641410 -55863143 - AluJb SINE Alu -1 311 1 2163 233 65 23 chr17 33641540 33642107 -55862446 - L1ME1 LINE L1 -5 6230 5640 4333 228 48 87 chr17 33642208 33642450 -55862103 - L1ME1 LINE L1 -2071 4144 3894 2386 77 0 3 chr17 33642450 33642748 -55861805 - AluSg SINE Alu -11 299 3 4333 228 48 87 chr17 33642748 33643621 -55860932 - L1ME1 LINE L1 -2321 3894 2988 1620 168 0 40 chr17 33643621 33643783 -55860770 - AluJb SINE Alu -20 292 125 330 26 0 0 chr17 33643783 33643822 -55860731 + (TG)n Simple_repeat Simple_repeat 2 40 0 2010 112 3 37 chr17 33643822 33644117 -55860436 - AluSx SINE Alu -27 285 1 1620 168 0 40 chr17 33644117 33644257 -55860296 - AluJb SINE Alu -185 127 1 4333 228 48 87 chr17 33644257 33645769 -55858784 - L1ME1 LINE L1 -3227 2988 1014 991 197 5 0 chr17 33645769 33645962 -55858591 - AluJb SINE Alu 0 312 119 655 111 0 0 chr17 33646055 33646145 -55858408 - AluJ/FLAM SINE Alu -222 90 1 486 105 38 105 chr17 33646462 33646543 -55858010 - L1MB2 LINE L1 -36 6135 6061 1496 134 92 42 chr17 33646543 33646826 -55857727 - AluJo SINE Alu -15 297 1 486 105 38 105 chr17 33646826 33646849 -55857704 - L1MB2 LINE L1 -110 6061 6038 301 344 22 0 chr17 33646898 33646988 -55857565 - MIR SINE MIR -81 127 36 2294 93 0 26 chr17 33647489 33647801 -55856752 + AluSx SINE Alu 1 304 -8 652 221 132 10 chr17 33648415 33648619 -55855934 - L3 LINE CR1 -696 881 653 378 350 113 39 chr17 33648622 33648931 -55855622 - L3 LINE CR1 -1200 377 46 363 197 0 13 chr17 33649155 33649231 -55855322 - MLT1K LTR MaLR -3 585 511 2423 93 0 0 chr17 33649271 33649572 -55854981 + AluSq SINE Alu 1 301 -12 1888 149 30 3 chr17 33650710 33651011 -55853542 + AluSx SINE Alu 1 309 -3 230 220 0 0 chr17 33651074 33651124 -55853429 - L1MB2 LINE L1 -30 6141 6092 186 363 93 63 chr17 33652215 33652645 -55851908 + L2 LINE L2 2824 3266 -6 387 272 136 18 chr17 33653810 33653979 -55850574 - MER5A DNA MER1_type 0 189 1 346 267 8 25 chr17 33653993 33654113 -55850440 - L1MB2 LINE L1 -1985 5823 5706 1091 172 34 14 chr17 33654258 33654498 -55850055 - L1MC3 LINE L1 -111 6055 5811 688 204 164 62 chr17 33654609 33654884 -55849669 + L1MC3 LINE L1 6040 6342 -1443 391 283 21 28 chr17 33655453 33655598 -55848955 - HAL1b LINE L1 -821 527 384 2123 121 0 3 chr17 33655697 33655995 -55848558 + AluSg SINE Alu 1 297 -13 408 207 11 0 chr17 33656257 33656344 -55848209 - HsTC2 DNA Tc2 0 1898 1811 1729 113 18 101 chr17 33657178 33657515 -55847038 + L1MA5 LINE L1 5990 6298 -2 782 288 56 10 chr17 33657706 33657994 -55846559 - L2 LINE L2 -8 3305 3005 282 264 66 33 chr17 33659465 33659586 -55844967 + L1MC4a LINE L1 5862 5986 -1822 2198 94 14 3 chr17 33659651 33659938 -55844615 + AluSx SINE Alu 21 310 -2 277 309 82 27 chr17 33659949 33660059 -55844494 - L1MC4a LINE L1 -1877 5931 5816 454 194 9 37 chr17 33660070 33660133 -55844420 - MER103 DNA DNA -57 109 49 2037 156 0 0 chr17 33660133 33660435 -55844118 + AluSx SINE Alu 1 302 -10 454 194 9 37 chr17 33660435 33660479 -55844074 - MER103 DNA DNA -117 49 5 1206 132 16 11 chr17 33660629 33660819 -55843734 - Tigger1 DNA MER2_type 0 2418 2228 14657 111 9 58 chr17 33660943 33661688 -55842865 - Tigger1 DNA MER2_type -200 2218 1438 2387 105 0 0 chr17 33661688 33661994 -55842559 - AluSx SINE Alu -6 306 1 14657 111 9 58 chr17 33661994 33662982 -55841571 - Tigger1 DNA MER2_type -980 1438 624 1516 173 88 34 chr17 33662982 33663277 -55841276 - AluJo SINE Alu -1 311 1 14657 111 9 58 chr17 33663277 33663873 -55840680 - Tigger1 DNA MER2_type -1794 624 1 2453 210 55 9 chr17 33664137 33664718 -55839835 - L1MEc LINE L1 -5336 1060 453 21 36 0 0 chr17 33665166 33665194 -55839359 + AT_rich Low_complexity Low_complexity 1 28 0 2515 66 0 0 chr17 33665563 33665866 -55838687 - AluY SINE Alu -8 303 1 841 186 0 0 chr17 33667355 33667484 -55837069 + FLAM_A SINE Alu 1 129 -4 7937 218 44 33 chr17 33667563 33667840 -55836713 + L1ME1 LINE L1 3119 3391 -2775 1864 113 3 75 chr17 33667840 33668160 -55836393 + AluSx SINE Alu 1 297 -15 7937 218 44 33 chr17 33668160 33668919 -55835634 + L1ME1 LINE L1 3391 4140 -2026 2414 86 0 7 chr17 33668919 33669222 -55835331 + AluSx SINE Alu 1 301 -11 7937 218 44 33 chr17 33669222 33671158 -55833395 + L1ME1 LINE L1 4140 6116 -50 26 74 0 0 chr17 33671942 33671996 -55832557 + AT_rich Low_complexity Low_complexity 1 54 0 423 294 77 42 chr17 33672547 33672690 -55831863 + MIR SINE MIR 42 189 -73 2011 144 3 0 chr17 33673598 33673896 -55830657 + AluSq SINE Alu 1 299 -14 2235 116 0 0 chr17 33675061 33675354 -55829199 - AluSx SINE Alu -14 298 6 201 233 23 0 chr17 33675923 33675966 -55828587 + MER5B DNA MER1_type 1 44 -134 * 310 181 28 14 chr17 33675964 33676036 -55828517 - MER5B DNA MER1_type -80 98 26 21 36 0 0 chr17 33676139 33676167 -55828386 + AT_rich Low_complexity Low_complexity 1 28 0 2250 240 59 38 chr17 33676326 33677133 -55827420 - L1MDa LINE L1 -5452 1088 34 1804 139 76 38 chr17 33677335 33677679 -55826874 - MER46B DNA MER2_type -4 232 1 1756 153 81 39 chr17 33678120 33678479 -55826074 + MLT1A2 LTR MaLR 1 374 0 607 286 162 30 chr17 33678766 33679105 -55825448 - L2 LINE L2 -10 3303 2920 211 267 19 105 chr17 33679194 33679299 -55825254 - MIR SINE MIR -20 242 147 1434 174 143 6 chr17 33680099 33680420 -55824133 - MLT1A1 LTR MaLR 0 365 1 281 188 0 0 chr17 33680575 33680623 -55823930 - MER5B DNA MER1_type -1 177 130 966 135 0 0 chr17 33680643 33680776 -55823777 - FLAM_C SINE Alu 0 133 1 707 213 14 0 chr17 33680778 33680919 -55823634 - MER5B DNA MER1_type -35 143 1 2408 98 0 9 chr17 33681200 33681515 -55823038 - AluSq SINE Alu -1 312 1 1724 153 69 0 chr17 33681981 33682255 -55822298 - AluJb SINE Alu -19 293 1 268 301 14 0 chr17 33682382 33682455 -55822098 + MIR SINE MIR 61 134 -74 284 317 89 8 chr17 33682539 33682662 -55821891 + L2 LINE L2 3138 3270 -2 6719 177 35 5 chr17 33685114 33685877 -55818676 + L1MC3 LINE L1 5441 6258 -1527 2241 98 14 10 chr17 33685877 33686173 -55818380 + AluSg1 SINE Alu 1 297 -12 6719 177 35 5 chr17 33686173 33686662 -55817891 + L1MC3 LINE L1 6258 6731 -1054 815 114 0 0 chr17 33686665 33686770 -55817783 - FLAM_C SINE Alu -20 123 19 430 147 62 78 chr17 33686780 33686875 -55817678 + L1MB8 LINE L1 6051 6145 -33 2457 136 23 43 chr17 33686875 33687004 -55817549 - MLT1B LTR MaLR 0 390 260 2209 106 0 3 chr17 33687004 33687297 -55817256 - AluY SINE Alu -19 292 1 2457 136 23 43 chr17 33687297 33687565 -55816988 - MLT1B LTR MaLR -130 260 1 430 147 62 78 chr17 33687565 33687598 -55816955 + L1MB8 LINE L1 6145 6177 -1 1627 155 13 43 chr17 33687781 33688084 -55816469 + AluJo SINE Alu 1 294 -18 541 257 228 4 chr17 33688092 33688364 -55816189 + L1MC4 LINE L1 7708 8040 -2 520 269 106 29 chr17 33688681 33688889 -55815664 + Charlie8 DNA MER1_type 6 229 -2188 315 0 0 0 chr17 33688992 33689027 -55815526 + (CA)n Simple_repeat Simple_repeat 2 36 0 293 281 109 0 chr17 33689214 33689342 -55815211 + L1M4 LINE L1 4753 4894 -1252 634 304 101 19 chr17 33689362 33689780 -55814773 + L1M4 LINE L1 2825 3276 -2870 526 209 7 65 chr17 33689959 33690112 -55814441 - L1ME3 LINE L1 -2 6160 6017 884 268 92 43 chr17 33690118 33690488 -55814065 + L2 LINE L2 2919 3306 -7 1989 102 33 11 chr17 33691816 33692090 -55812463 + AluSg SINE Alu 1 280 -30 203 239 76 33 chr17 33692332 33692424 -55812129 - MIR3 SINE MIR -3 205 110 207 318 81 28 chr17 33692500 33692711 -55811842 + L2 LINE L2 2172 2393 -921 311 267 105 0 chr17 33692762 33692867 -55811686 - L1MC4 LINE L1 0 8042 7927 422 294 131 19 chr17 33692955 33693346 -55811207 - LTR16C LTR ERVL -13 478 2 1913 150 13 7 chr17 33693786 33694092 -55810461 + AluSx SINE Alu 1 308 -4 601 181 4 6 chr17 33695473 33695633 -55808920 + L1M4 LINE L1 5178 5339 -829 423 0 0 0 chr17 33695761 33695808 -55808745 + (TG)n Simple_repeat Simple_repeat 2 48 0 714 203 43 7 chr17 33695956 33696094 -55808459 - FRAM SINE Alu -35 141 1 3800 12 0 0 chr17 33696722 33697154 -55807399 - L1PA3 LINE L1 0 6155 5724 36 40 0 0 chr17 33697286 33697336 -55807217 + AT_rich Low_complexity Low_complexity 1 50 0 33497 43 8 0 chr17 33697338 33702529 -55802024 - L1PA5 LINE L1 -5 6149 922 234 247 129 0 chr17 33702529 33702614 -55801939 - MER103 DNA DNA -69 97 2 547 133 219 0 chr17 33702744 33702849 -55801704 + FRAM SINE Alu 25 152 -24 2225 120 7 0 chr17 33704329 33704637 -55799916 + AluSx SINE Alu 1 310 -2 365 204 11 43 chr17 33704697 33704790 -55799763 + MER21B LTR ERV1 1 90 -773 1471 183 16 0 chr17 33704845 33705097 -55799456 + MER21B LTR ERV1 83 338 -525 6196 226 67 35 chr17 33705128 33705580 -55798973 - L1MEc LINE L1 -4096 2300 1864 2135 180 36 21 chr17 33705580 33705957 -55798596 - L1MB3 LINE L1 -13 6170 5783 2394 109 0 0 chr17 33705957 33706269 -55798284 - AluSx SINE Alu 0 312 1 2135 180 36 21 chr17 33706269 33706369 -55798184 - L1MB3 LINE L1 -400 5783 5686 6196 226 67 35 chr17 33706369 33708041 -55796512 - L1MEc LINE L1 -4532 1864 107 2262 110 0 7 chr17 33708072 33708373 -55796180 - AluSc SINE Alu -10 299 1 375 280 127 38 chr17 33708429 33708743 -55795810 - L1MB3 LINE L1 -2051 5757 5416 36 23 0 0 chr17 33708902 33708945 -55795608 + AT_rich Low_complexity Low_complexity 1 43 0 2603 49 0 3 chr17 33709257 33709564 -55794989 + AluY SINE Alu 1 306 -5 2167 135 3 0 chr17 33709722 33710026 -55794527 + AluSq SINE Alu 1 305 -8 2138 119 23 0 chr17 33711071 33711373 -55793180 - AluSx SINE Alu -1 311 3 1478 242 130 29 chr17 33711620 33712421 -55792132 - L2 LINE L2 0 3313 2427 994 198 64 0 chr17 33713720 33713922 -55790631 + MER58C DNA MER1_type 1 215 0 218 261 0 0 chr17 33713951 33713997 -55790556 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 489 273 8 53 chr17 33714035 33714167 -55790386 + L2 LINE L2 3147 3272 0 536 239 33 44 chr17 33714977 33715157 -55789396 + MER5B DNA MER1_type 1 178 0 643 280 49 109 chr17 33717611 33717768 -55786785 - HAL1 LINE L1 -29 2478 2313 1944 165 0 10 chr17 33717768 33718065 -55786488 + AluJb SINE Alu 1 294 -18 643 280 49 109 chr17 33718065 33718439 -55786114 - HAL1 LINE L1 -194 2313 1979 1080 202 48 40 chr17 33718712 33718788 -55785765 + MIR SINE MIR 8 82 -180 2164 98 7 7 chr17 33718788 33719084 -55785469 + AluSg SINE Alu 1 296 -14 1080 202 48 40 chr17 33719084 33719259 -55785294 + MIR SINE MIR 82 261 -1 2501 82 0 0 chr17 33719307 33719613 -55784940 - AluY SINE Alu -4 307 2 1320 240 41 36 chr17 33721194 33721848 -55782705 + L2 LINE L2 2670 3313 0 1090 299 126 42 chr17 33721852 33722832 -55781721 - HAL1 LINE L1 -1379 1128 67 189 0 0 0 chr17 33723099 33723120 -55781433 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 395 210 12 0 chr17 33725012 33725093 -55779460 - MER103 DNA DNA -13 153 72 2505 72 0 3 chr17 33725093 33725399 -55779154 - AluY SINE Alu -6 305 1 1181 248 34 73 chr17 33725492 33726056 -55778497 + MER34 LTR ERV1 1 542 0 1824 170 3 13 chr17 33726282 33726593 -55777960 - AluSx SINE Alu -4 308 1 786 194 17 0 chr17 33726624 33726799 -55777754 + L1MC4 LINE L1 7743 7920 -122 2613 213 48 25 chr17 33726867 33727803 -55776750 + LTR28 LTR ERV1 3 1020 0 601 120 34 17 chr17 33727805 33727922 -55776631 + L1MC4 LINE L1 7923 8041 -1 984 154 20 20 chr17 33728210 33728405 -55776148 - MER96B DNA MER1_type? -184 233 39 343 356 122 5 chr17 33728484 33728672 -55775881 - MIR SINE MIR -19 243 34 2064 130 0 0 chr17 33728876 33729161 -55775392 - AluSx SINE Alu -5 307 23 920 254 25 8 chr17 33729495 33729731 -55774822 - AluSg/x SINE Alu 0 309 70 347 281 136 51 chr17 33729856 33730091 -55774462 + L1M4 LINE L1 3601 3855 -2291 2208 102 0 49 chr17 33730091 33730415 -55774138 + AluSg SINE Alu 1 308 -2 198 0 0 0 chr17 33730669 33730691 -55773862 + (T)n Simple_repeat Simple_repeat 1 22 0 1366 231 65 5 chr17 33731362 33731734 -55772819 + MLT1G LTR MaLR 197 590 0 232 222 100 11 chr17 33731738 33731828 -55772725 + MLT1G-int LTR MaLR 4 101 -1270 410 308 16 39 chr17 33731870 33732110 -55772443 + MLT1G-int LTR MaLR 292 522 -851 1591 162 20 44 chr17 33732920 33733216 -55771337 - AluJo SINE Alu -23 289 1 1709 235 32 44 chr17 33733280 33733515 -55771038 + MLT1G LTR MaLR 11 247 -343 1760 126 84 11 chr17 33733515 33733801 -55770752 + AluSx SINE Alu 1 307 -5 1709 235 32 44 chr17 33733801 33734038 -55770515 + MLT1G LTR MaLR 247 479 -111 1998 113 0 36 chr17 33734038 33734340 -55770213 - AluSq SINE Alu -22 291 1 1709 235 32 44 chr17 33734340 33734364 -55770189 + MLT1G LTR MaLR 479 502 -88 25 0 0 0 chr17 33734600 33734625 -55769928 + AT_rich Low_complexity Low_complexity 1 25 0 2156 121 23 3 chr17 33734699 33735005 -55769548 - AluSx SINE Alu 0 312 1 514 220 40 0 chr17 33735216 33735316 -55769237 + FLAM_A SINE Alu 1 104 -38 244 306 105 16 chr17 33735803 33735927 -55768626 + MIR3 SINE MIR 64 198 -10 194 250 0 0 chr17 33736081 33736121 -55768432 - MIR SINE MIR -30 232 193 382 269 137 52 chr17 33737215 33737486 -55767067 - L1 LINE L1 -763 5383 5090 262 263 132 16 chr17 33737518 33737708 -55766845 - L1ME LINE L1 -240 5881 5670 2499 64 0 0 chr17 33738416 33738711 -55765842 - AluY SINE Alu -16 295 1 227 111 0 19 chr17 33739180 33739234 -55765319 - LTR66 LTR ERVL -169 441 389 385 335 26 7 chr17 33739697 33739849 -55764704 + L2 LINE L2 2916 3070 -243 40605 33 24 1 chr17 33739859 33745874 -55758679 - L1PA2 LINE L1 0 6155 1 338 303 185 11 chr17 33745918 33746096 -55758457 + L2 LINE L2 3103 3311 -2 984 206 63 35 chr17 33747758 33748131 -55756422 + MLT1D LTR MaLR 80 505 0 1826 150 4 7 chr17 33748197 33748471 -55756082 + AluJb SINE Alu 13 285 -27 573 147 52 35 chr17 33748471 33748566 -55755987 + AluJb SINE Alu 187 286 -26 378 0 0 0 chr17 33748566 33748608 -55755945 + (CA)n Simple_repeat Simple_repeat 2 43 0 573 147 52 35 chr17 33748608 33748628 -55755925 + AluJb SINE Alu 286 304 -8 285 190 76 13 chr17 33748652 33748731 -55755822 - MIR SINE MIR -44 218 135 1189 134 0 70 chr17 33748743 33748797 -55755756 - AluJo SINE Alu -125 187 131 2507 63 0 3 chr17 33748797 33749098 -55755455 - AluY SINE Alu -11 300 1 1189 134 0 70 chr17 33749098 33749244 -55755309 - AluJo SINE Alu -181 131 1 402 100 0 0 chr17 33750522 33750582 -55753971 + (TG)n Simple_repeat Simple_repeat 2 61 0 474 184 125 0 chr17 33750589 33750725 -55753828 + L1ME4a LINE L1 5963 6115 -6 321 222 85 46 chr17 33751215 33751317 -55753236 - L1ME4a LINE L1 -206 5915 5804 2204 116 0 23 chr17 33751317 33751627 -55752926 - AluSx SINE Alu -9 303 1 321 222 85 46 chr17 33751627 33751677 -55752876 - L1ME4a LINE L1 -317 5804 5757 * 972 188 16 78 chr17 33751670 33751781 -55752772 - L1MA4A LINE L1 -7 6296 6180 1983 122 30 3 chr17 33751781 33752076 -55752477 - AluSx SINE Alu -9 303 1 972 188 16 78 chr17 33752076 33752106 -55752447 - L1MA4A LINE L1 -123 6180 6150 2287 122 106 5 chr17 33752106 33752492 -55752061 + MSTB LTR MaLR 1 425 -1 972 188 16 78 chr17 33752492 33752596 -55751957 - L1MA4A LINE L1 -153 6150 6070 1543 187 18 11 chr17 33752596 33752880 -55751673 + AluJo SINE Alu 16 301 -11 972 188 16 78 chr17 33752880 33752940 -55751613 - L1MA4A LINE L1 -233 6070 6008 2380 92 3 0 chr17 33753003 33753307 -55751246 - AluSx SINE Alu -7 305 1 406 238 140 30 chr17 33753353 33753517 -55751036 - L1ME4a LINE L1 -462 5659 5478 223 415 0 0 chr17 33755926 33756032 -55748521 + L2 LINE L2 1896 2001 -1313 2796 10 0 0 chr17 33756035 33756336 -55748217 + AluYb8 SINE Alu 15 315 -3 682 275 98 68 chr17 33756359 33756686 -55747867 + L2 LINE L2 2276 2623 -691 2169 146 3 20 chr17 33756686 33757029 -55747524 - MER1B DNA MER1_type 0 337 1 682 275 98 68 chr17 33757029 33757170 -55747383 + L2 LINE L2 2623 2758 -556 334 221 221 0 chr17 33757176 33757289 -55747264 + L1ME LINE L1 16 153 -5966 606 294 10 5 chr17 33757292 33757486 -55747067 + L1ME2 LINE L1 5462 5656 -506 1104 212 16 20 chr17 33757487 33757732 -55746821 + Charlie1 DNA MER1_type 2 245 -2516 405 303 132 41 chr17 33757767 33758074 -55746479 + L1ME2 LINE L1 5646 5915 -249 208 239 85 136 chr17 33758630 33758806 -55745747 + L2 LINE L2 3029 3195 -77 643 319 25 34 chr17 33759573 33759808 -55744745 + MIR SINE MIR 9 241 -21 657 163 14 7 chr17 33759857 33759998 -55744555 + CT-rich Low_complexity Low_complexity 3 144 0 2066 111 13 19 chr17 33760559 33760866 -55743687 - AluSg SINE Alu -5 305 1 404 229 68 82 chr17 33761165 33761444 -55743109 + L1MC5 LINE L1 7653 7927 -34 995 316 92 50 chr17 33761448 33761741 -55742812 + L1ME LINE L1 2659 2939 -3190 2034 119 52 24 chr17 33761741 33762069 -55742484 - MER1B DNA MER1_type 0 337 1 995 316 92 50 chr17 33762069 33762263 -55742290 + L1ME LINE L1 2939 3124 -3005 2479 107 0 0 chr17 33762263 33762573 -55741980 + AluSx SINE Alu 1 310 -2 995 316 92 50 chr17 33762573 33763035 -55741518 + L1ME LINE L1 3124 3648 -2481 1783 177 0 13 chr17 33763163 33763468 -55741085 - AluJo SINE Alu -11 301 1 740 180 0 8 chr17 33765055 33765183 -55739370 - FLAM_A SINE Alu -6 127 1 498 281 73 16 chr17 33766006 33766198 -55738355 + L1ME LINE L1 5460 5662 -442 189 340 0 0 chr17 33766233 33766286 -55738267 - MIR SINE MIR 0 262 210 41 21 0 0 chr17 33766496 33766544 -55738009 + AT_rich Low_complexity Low_complexity 1 48 0 702 203 30 0 chr17 33766696 33766829 -55737724 - MER8 DNA MER2_type -2 237 101 2325 80 0 17 chr17 33766866 33767165 -55737388 - AluY SINE Alu -17 294 1 2387 90 33 36 chr17 33767308 33767673 -55736880 + THE1B LTR MaLR 1 364 0 2041 142 3 3 chr17 33767721 33768010 -55736543 - AluSx SINE Alu -23 289 1 371 362 77 10 chr17 33768067 33768274 -55736279 + L1ME LINE L1 4729 4949 -1197 2369 85 0 0 chr17 33768305 33768598 -55735955 - AluY SINE Alu -18 293 1 287 316 95 11 chr17 33768763 33769026 -55735527 + L1ME LINE L1 5266 5550 -612 2805 177 25 35 chr17 33769171 33769735 -55734818 + MER68 LTR ERV1 5 562 0 502 227 24 28 chr17 33769834 33770037 -55734516 + HAL1b LINE L1 1189 1340 -8 613 189 47 0 chr17 33770771 33770898 -55733655 + MER94 DNA DNA 1 133 -1 567 292 98 30 chr17 33771293 33772670 -55731883 + L1ME LINE L1 4178 5654 -508 2267 86 0 0 chr17 33772967 33773247 -55731306 + AluSg SINE Alu 1 280 -30 412 278 85 81 chr17 33773255 33773514 -55731039 + HAL1b LINE L1 346 605 -743 21 0 0 0 chr17 33773566 33773587 -55730966 + AT_rich Low_complexity Low_complexity 1 21 0 531 339 46 14 chr17 33773939 33774370 -55730183 + L1M4 LINE L1 3908 4352 -1794 764 224 90 59 chr17 33774373 33774639 -55729914 - MLT1E LTR MaLR -317 276 3 712 276 95 15 chr17 33774751 33775161 -55729392 - L1M4 LINE L1 -1094 5052 4610 1779 139 44 4 chr17 33775251 33775524 -55729029 - AluSx SINE Alu -26 286 3 3485 82 6 22 chr17 33775651 33776153 -55728400 - L1PA11 LINE L1 -1 6173 5680 3087 88 19 9 chr17 33776156 33776943 -55727610 + L1PA11 LINE L1 4873 5670 -498 688 338 147 17 chr17 33777012 33777660 -55726893 + L2 LINE L2 1974 2705 -609 186 194 0 0 chr17 33777950 33777986 -55726567 - L2 LINE L2 -977 2337 2302 24 0 0 0 chr17 33778200 33778224 -55726329 + AT_rich Low_complexity Low_complexity 1 24 0 2595 100 45 3 chr17 33778422 33778802 -55725751 + MER48 LTR ERV1 1 396 -2 1750 178 7 7 chr17 33779216 33779508 -55725045 - AluJb SINE Alu -20 292 1 2180 121 3 3 chr17 33779765 33780063 -55724490 - AluSc SINE Alu -11 298 1 1586 162 97 0 chr17 33780213 33780522 -55724031 + MER44D DNA MER2_type 1 609 0 4212 145 34 35 chr17 33782233 33783477 -55721076 + L1MA7 LINE L1 4896 6131 -160 1171 162 6 0 chr17 33783490 33783669 -55720884 - FRAM SINE Alu 0 176 1 917 112 50 0 chr17 33783669 33783830 -55720723 + L1MA6 LINE L1 6132 6300 0 23 0 0 0 chr17 33783946 33783969 -55720584 + AT_rich Low_complexity Low_complexity 1 23 0 1403 242 157 2 chr17 33784315 33784773 -55719780 + L1MC4 LINE L1 6463 6991 -1051 261 232 112 24 chr17 33785390 33785515 -55719038 - L1MC4 LINE L1 0 8042 7907 333 259 71 82 chr17 33785814 33785940 -55718613 - Charlie8 DNA MER1_type -46 284 159 2480 67 0 0 chr17 33785940 33786240 -55718313 - AluY SINE Alu -11 300 1 333 259 71 82 chr17 33786240 33786283 -55718270 - Charlie8 DNA MER1_type -171 159 117 1686 183 50 0 chr17 33786820 33787143 -55717410 + MER2 DNA MER2_type 1 339 -6 23 68 0 0 chr17 33787208 33787252 -55717301 + AT_rich Low_complexity Low_complexity 1 44 0 344 169 133 12 chr17 33787517 33787600 -55716953 + MER5C DNA MER1_type 32 124 -200 1516 199 20 10 chr17 33787810 33788106 -55716447 + MLT1A1 LTR MaLR 67 365 0 2235 110 3 3 chr17 33788772 33789081 -55715472 + AluY SINE Alu 1 309 -2 24 32 0 0 chr17 33789133 33789164 -55715389 + AT_rich Low_complexity Low_complexity 1 31 0 1167 198 0 55 chr17 33789234 33789472 -55715081 - AluJb SINE Alu -87 225 1 373 232 73 3 chr17 33790504 33790666 -55713887 + MLT1I LTR MaLR 270 401 -8 312 236 63 110 chr17 33790719 33790910 -55713643 - L1MC/D LINE L1 -2018 5790 5609 1627 148 31 16 chr17 33790923 33791180 -55713373 + AluJo SINE Alu 38 298 -14 1524 197 16 48 chr17 33791339 33791714 -55712839 + MLT1A1 LTR MaLR 3 365 0 279 310 0 0 chr17 33791756 33791827 -55712726 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 22 70 0 0 chr17 33791905 33791948 -55712605 + AT_rich Low_complexity Low_complexity 1 43 0 1518 175 0 29 chr17 33791948 33792222 -55712331 - AluJo SINE Alu -46 266 1 2077 159 0 0 chr17 33792227 33792535 -55712018 - AluSx SINE Alu -4 308 1 2267 85 3 0 chr17 33793276 33793558 -55710995 - AluSx SINE Alu -14 298 16 513 294 162 19 chr17 33793957 33794222 -55710331 + L2 LINE L2 2238 2540 -774 265 296 11 80 chr17 33794429 33794605 -55709948 + MLT1L LTR MaLR 37 200 -415 674 214 81 38 chr17 33794693 33794903 -55709650 + MLT1L LTR MaLR 387 605 -10 723 278 66 12 chr17 33795108 33795349 -55709204 - MIR SINE MIR -3 259 6 323 258 11 43 chr17 33795639 33795732 -55708821 - MIR SINE MIR -6 256 167 356 221 0 63 chr17 33795808 33795903 -55708650 + L2 LINE L2 2483 2571 -743 547 326 58 87 chr17 33796023 33796471 -55708082 - L2 LINE L2 0 3272 2838 276 318 126 56 chr17 33796567 33796781 -55707772 - L2 LINE L2 -660 2654 2426 2273 105 0 3 chr17 33796889 33797194 -55707359 + AluSc SINE Alu 2 305 -4 875 267 116 26 chr17 33797556 33797945 -55706608 - MLT1J1 LTR MaLR -14 432 9 285 184 41 71 chr17 33798504 33798602 -55705951 - MLT1J2 LTR MaLR -287 163 69 378 295 73 123 chr17 33798909 33799251 -55705302 - L2 LINE L2 0 3272 2948 25 37 0 0 chr17 33799712 33799739 -55704814 + AT_rich Low_complexity Low_complexity 1 27 0 850 154 0 15 chr17 33799928 33800064 -55704489 - AluJo SINE Alu -178 134 1 833 220 57 68 chr17 33800518 33800681 -55703872 - MIR SINE MIR 0 262 102 2747 3 0 3 chr17 33800681 33800983 -55703570 + AluYa5 SINE Alu 1 301 -10 833 220 57 68 chr17 33800983 33801083 -55703470 - MIR SINE MIR -160 102 2 554 261 89 6 chr17 33801466 33801623 -55702930 + MIR SINE MIR 23 192 -70 770 280 100 14 chr17 33802323 33802673 -55701880 + L2 LINE L2 1775 2154 -1160 2043 115 7 7 chr17 33803376 33803671 -55700882 + AluSx SINE Alu 1 295 -17 4004 103 51 36 chr17 33804132 33804264 -55700289 - L1PB2 LINE L1 0 6151 6022 2309 85 3 3 chr17 33804264 33804557 -55699996 - AluSc SINE Alu -16 293 1 4004 103 51 36 chr17 33804557 33805091 -55699462 - L1PB2 LINE L1 -129 6022 5475 4692 186 41 23 chr17 33805091 33806260 -55698293 - L1PB2 LINE L1 -952 5194 4005 1140 269 68 25 chr17 33806381 33806820 -55697733 + MLT1C LTR MaLR 1 458 -9 195 231 328 15 chr17 33807286 33807420 -55697133 + L2 LINE L2 3077 3252 -61 905 180 205 11 chr17 33807653 33807936 -55696617 + L1MC4 LINE L1 6683 7020 -1022 2458 91 0 3 chr17 33807936 33808243 -55696310 + AluSx SINE Alu 1 306 -6 938 241 38 35 chr17 33808243 33808583 -55695970 + L1MC4 LINE L1 7697 8037 -5 650 294 65 14 chr17 33808894 33809187 -55695366 - L1ME LINE L1 -302 5819 5512 1482 188 4 11 chr17 33809493 33809765 -55694788 - AluJo SINE Alu -1 311 42 219 128 170 0 chr17 33809792 33809839 -55694714 + MIR SINE MIR 33 87 -175 198 273 18 18 chr17 33810047 33810102 -55694451 + L2 LINE L2 2243 2297 -1017 313 341 166 18 chr17 33810129 33810358 -55694195 + L2 LINE L2 2386 2648 -666 661 280 126 54 chr17 33810432 33810861 -55693692 + L2 LINE L2 2853 3312 -1 480 329 67 18 chr17 33811832 33812459 -55692094 - L1MEd LINE L1 -756 1734 988 879 199 60 45 chr17 33812483 33812749 -55691804 - L1ME2 LINE L1 -1 6163 5894 1974 124 3 17 chr17 33812770 33813069 -55691484 + AluSx SINE Alu 1 295 -17 1608 271 94 80 chr17 33813075 33813708 -55690845 + L2 LINE L2 2007 2669 -644 2412 60 0 10 chr17 33813708 33814008 -55690545 - AluY SINE Alu -14 297 1 1608 271 94 80 chr17 33814008 33814416 -55690137 + L2 LINE L2 2669 3070 -243 25 31 0 0 chr17 33814438 33814470 -55690083 + AT_rich Low_complexity Low_complexity 1 32 0 1011 232 30 21 chr17 33814653 33814890 -55689663 - MIR SINE MIR -11 251 13 647 294 113 0 chr17 33814926 33815157 -55689396 - MIR SINE MIR 0 262 6 241 228 0 18 chr17 33815272 33815329 -55689224 - L2 LINE L2 -1 3312 3257 188 292 21 0 chr17 33815988 33816036 -55688517 + MIR SINE MIR 214 262 0 1707 228 31 35 chr17 33816612 33817091 -55687462 - MLT1D LTR MaLR 0 505 29 956 259 52 65 chr17 33817140 33817522 -55687031 + MER21B LTR ERV1 26 402 -461 635 268 31 55 chr17 33817527 33817781 -55686772 + MER21B LTR ERV1 507 754 -109 567 252 101 59 chr17 33817854 33818262 -55686291 + MLT1H LTR MaLR 12 548 -1 482 280 104 43 chr17 33819298 33819614 -55684939 + L1MEc LINE L1 790 1085 -5311 2351 94 0 25 chr17 33819614 33819934 -55684619 + AluSx SINE Alu 1 312 0 482 280 104 43 chr17 33819934 33820500 -55684053 + L1MEc LINE L1 1085 1755 -4641 2158 139 0 7 chr17 33820523 33820832 -55683721 + AluSx SINE Alu 6 312 0 377 171 65 12 chr17 33820956 33821126 -55683427 + (TA)n Simple_repeat Simple_repeat 1 179 0 305 336 77 18 chr17 33821238 33821458 -55683095 + L1MEc LINE L1 1909 2141 -4255 1308 262 83 15 chr17 33822097 33822598 -55681955 + L1MEc LINE L1 2215 2785 -3430 2178 102 7 7 chr17 33822598 33822893 -55681660 - AluSg SINE Alu -15 295 1 1308 262 83 15 chr17 33822893 33823138 -55681415 + L1MEc LINE L1 2785 3012 -3203 520 329 92 45 chr17 33824308 33824776 -55679777 - L1MEd LINE L1 -4024 2286 1797 255 314 48 28 chr17 33824781 33825029 -55679524 - L1MEd LINE L1 -4572 1738 1486 1078 276 97 27 chr17 33825032 33825305 -55679248 - L1MEd LINE L1 -4869 1250 997 2158 104 10 10 chr17 33825305 33825603 -55678950 - AluSg SINE Alu -8 302 5 1078 276 97 27 chr17 33825603 33825997 -55678556 - L1MEd LINE L1 -5122 997 615 8526 168 68 38 chr17 33825997 33827699 -55676854 + MER52A LTR ERV1 4 1755 0 1078 276 97 27 chr17 33827699 33827994 -55676559 - L1MEd LINE L1 -5504 615 342 322 273 101 57 chr17 33828114 33828323 -55676230 - L1MEd LINE L1 -5891 228 11 383 291 125 66 chr17 33828335 33829205 -55675348 - L1M4 LINE L1 -2399 3747 2930 1899 140 0 38 chr17 33829205 33829497 -55675056 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr17 33829499 33829541 -55675012 + (CA)n Simple_repeat Simple_repeat 2 43 0 383 291 125 66 chr17 33829541 33829606 -55674947 - L1M4 LINE L1 -3216 2930 2870 1791 137 23 23 chr17 33829606 33829906 -55674647 - AluSx SINE Alu -11 301 2 383 291 125 66 chr17 33829906 33830418 -55674135 - L1M4 LINE L1 -3276 2870 2210 279 301 15 52 chr17 33830661 33830797 -55673756 + MLT1J LTR MaLR 1 131 -380 722 252 35 22 chr17 33830862 33831092 -55673461 + MLT1J LTR MaLR 279 511 0 1534 181 60 3 chr17 33831816 33832098 -55672455 - AluJb SINE Alu -14 298 1 716 151 118 0 chr17 33832098 33832217 -55672336 - AluJo SINE Alu -177 135 3 21 0 0 0 chr17 33833057 33833078 -55671475 + AT_rich Low_complexity Low_complexity 1 21 0 3338 46 2 2 chr17 33833692 33834106 -55670447 + L1PA5 LINE L1 5737 6150 -4 1882 133 14 10 chr17 33834939 33835233 -55669320 - AluJo SINE Alu -17 295 1 198 191 0 0 chr17 33835430 33835477 -55669076 + (CA)n Simple_repeat Simple_repeat 2 48 0 904 191 12 12 chr17 33835544 33835717 -55668836 + FRAM SINE Alu 1 173 -3 1933 65 0 51 chr17 33836231 33836523 -55668030 + AluY SINE Alu 35 311 0 1385 144 19 41 chr17 33836534 33836805 -55667748 - MER2 DNA MER2_type -80 265 1 231 288 27 14 chr17 33837214 33837287 -55667266 + L2 LINE L2 633 706 -2608 2966 264 100 17 chr17 33837292 33838073 -55666480 + L2 LINE L2 1764 2479 -834 2198 80 0 14 chr17 33838073 33838399 -55666154 - AluY SINE Alu 0 322 1 2966 264 100 17 chr17 33838399 33839038 -55665515 + L2 LINE L2 2479 3299 -14 186 191 43 21 chr17 33840104 33840151 -55664402 - MIR SINE MIR -93 115 68 273 333 0 0 chr17 33841026 33841125 -55663428 + (TA)n Simple_repeat Simple_repeat 2 100 0 538 235 18 48 chr17 33841288 33841454 -55663099 + MIR3 SINE MIR 31 191 -17 1020 240 137 43 chr17 33841870 33842061 -55662492 + MLT1D LTR MaLR 1 173 -332 2339 94 0 0 chr17 33842061 33842358 -55662195 + AluSx SINE Alu 7 303 -9 1020 240 137 43 chr17 33842358 33842612 -55661941 + MLT1D LTR MaLR 173 488 -17 189 253 52 154 chr17 33842818 33843051 -55661502 + L2 LINE L2 2919 3127 -145 639 249 158 18 chr17 33843698 33843919 -55660634 + MLT1J2 LTR MaLR 55 306 -144 1834 152 14 0 chr17 33843966 33844249 -55660304 + AluJb SINE Alu 1 287 -25 347 331 60 24 chr17 33844404 33844570 -55659983 - MIR SINE MIR -70 192 21 2210 84 0 11 chr17 33844855 33845167 -55659386 + AluY SINE Alu 1 309 0 259 149 43 0 chr17 33845338 33845385 -55659168 + MIR SINE MIR 147 195 -67 34 42 0 0 chr17 33845626 33845674 -55658879 + AT_rich Low_complexity Low_complexity 1 48 0 5492 172 43 27 chr17 33845961 33847929 -55656624 + L1PB4 LINE L1 4156 6154 -2 2189 110 7 0 chr17 33848148 33848447 -55656106 + AluSx SINE Alu 1 301 -11 225 286 0 32 chr17 33848613 33848676 -55655877 - L2 LINE L2 0 3272 3212 264 338 0 0 chr17 33848804 33848884 -55655669 + L2 LINE L2 3230 3309 -4 1129 136 38 0 chr17 33851848 33852032 -55652521 + MER20 DNA MER1_type 17 207 -12 1842 179 68 97 chr17 33852568 33853278 -55651275 + L1MC5 LINE L1 7238 7926 -35 180 347 58 41 chr17 33855470 33855591 -55648962 + MIR3 SINE MIR 61 183 -25 908 304 88 34 chr17 33855824 33856390 -55648163 + L2 LINE L2 1796 2392 -922 621 276 75 114 chr17 33856430 33856912 -55647641 - L2 LINE L2 -4 3268 2806 587 298 38 72 chr17 33856929 33857164 -55647389 + L2 LINE L2 2477 2719 -595 2359 104 7 0 chr17 33857164 33857473 -55647080 + AluSx SINE Alu 2 312 0 2245 81 7 10 chr17 33857478 33857773 -55646780 + AluY SINE Alu 1 294 -17 587 298 38 72 chr17 33857773 33857850 -55646703 + L2 LINE L2 2723 2784 -530 404 305 70 18 chr17 33857916 33858204 -55646349 + L1ME LINE L1 5182 5483 -751 2266 98 7 3 chr17 33858217 33858512 -55646041 + AluSx SINE Alu 4 299 -13 388 262 67 24 chr17 33858517 33858681 -55645872 + L1ME LINE L1 5611 5781 -340 2266 134 35 32 chr17 33858711 33859145 -55645408 + L1MA7 LINE L1 5856 6290 -1 526 247 33 33 chr17 33860711 33860878 -55643675 + MIR SINE MIR 41 212 -50 1361 255 81 71 chr17 33860992 33861596 -55642957 + MLT1L LTR MaLR 1 610 -5 30 0 0 0 chr17 33861653 33861683 -55642870 + AT_rich Low_complexity Low_complexity 1 30 0 321 194 0 15 chr17 33864097 33864164 -55640389 + MARNA DNA Mariner 40 105 -481 222 37 0 0 chr17 33864741 33864768 -55639785 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 561 109 209 18 chr17 33865019 33865129 -55639424 + LTR7 LTR ERV1 1 131 -319 4107 127 20 52 chr17 33865129 33866347 -55638206 + HERVH LTR ERV1 3 1492 -6221 1641 162 3 26 chr17 33867132 33867434 -55637119 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr17 33867904 33867932 -55636621 + AT_rich Low_complexity Low_complexity 1 28 0 527 263 73 24 chr17 33868228 33868475 -55636078 + L1MC4a LINE L1 5666 5924 -1884 264 294 0 35 chr17 33869629 33869714 -55634839 - L2 LINE L2 0 3313 3232 2225 65 41 3 chr17 33869787 33870077 -55634476 + AluY SINE Alu 1 301 -10 428 284 36 74 chr17 33871258 33871723 -55632830 + L1MC4a LINE L1 5573 6016 -105 226 326 0 35 chr17 33871888 33871974 -55632579 + MIR SINE MIR 97 179 -83 300 228 149 26 chr17 33873311 33873425 -55631128 + HAL1 LINE L1 10 137 -2370 347 266 145 29 chr17 33873440 33873647 -55630906 - L1ME4a LINE L1 -294 5827 5597 22 35 0 0 chr17 33873945 33873974 -55630579 + AT_rich Low_complexity Low_complexity 1 29 0 473 302 0 7 chr17 33874473 33874612 -55629941 + MIR SINE MIR 17 154 -108 1922 144 3 13 chr17 33874798 33875096 -55629457 + AluSx SINE Alu 1 295 -17 26 30 0 0 chr17 33875485 33875518 -55629035 + AT_rich Low_complexity Low_complexity 1 33 0 665 234 0 0 chr17 33875557 33875681 -55628872 + FLAM_A SINE Alu 1 124 -9 197 282 39 51 chr17 33876080 33876158 -55628395 - L2 LINE L2 -17 3296 3220 3344 149 79 4 chr17 33877532 33878465 -55626088 - L1PBa LINE L1 -3324 3538 2532 2667 135 19 9 chr17 33878465 33878886 -55625667 + MER57B LTR ERV1 1 425 -9 7248 85 21 26 chr17 33878890 33879346 -55625207 - L1PBa LINE L1 -4328 2535 2078 1713 154 0 7 chr17 33879346 33879626 -55624927 - AluY SINE Alu -33 278 1 7248 85 21 26 chr17 33879626 33880263 -55624290 - L1PBa LINE L1 -4785 2078 1447 1709 255 38 65 chr17 33880533 33881638 -55622915 - L2 LINE L2 -1 3312 2237 2374 78 7 0 chr17 33882079 33882386 -55622167 + AluY SINE Alu 1 309 -2 884 159 50 39 chr17 33882393 33882575 -55621978 + AluJb SINE Alu 129 312 0 249 86 0 0 chr17 33882600 33882635 -55621918 + U2 snRNA snRNA 1 35 -153 206 287 161 23 chr17 33882657 33882744 -55621809 - MIR3 SINE MIR -99 109 11 549 261 89 6 chr17 33883829 33883986 -55620567 + MIR SINE MIR 23 192 -70 711 245 117 5 chr17 33884926 33885122 -55619431 - MIR SINE MIR 0 262 45 3040 166 93 30 chr17 33885317 33886059 -55618494 + L1MA9 LINE L1 5490 6278 -34 2613 74 8 11 chr17 33886077 33886441 -55618112 - L1PA13 LINE L1 -2 6161 5799 285 29 0 0 chr17 33886741 33886775 -55617778 + (CA)n Simple_repeat Simple_repeat 1 34 0 2849 27 0 6 chr17 33887070 33887407 -55617146 + L1P2 LINE L1 5482 5816 -339 3396 141 11 51 chr17 33888053 33888721 -55615832 - L1MB3 LINE L1 -1 6182 5542 21 36 0 0 chr17 33888767 33888795 -55615758 + AT_rich Low_complexity Low_complexity 1 28 0 264 231 39 26 chr17 33889280 33889358 -55615195 - L2 LINE L2 0 3272 3194 1805 152 3 44 chr17 33889580 33889896 -55614657 - AluJo SINE Alu -9 303 1 1845 185 0 6 chr17 33890059 33890373 -55614180 + AluJb SINE Alu 1 312 0 201 231 0 0 chr17 33890802 33890841 -55613712 + GA-rich Low_complexity Low_complexity 2 40 0 543 288 49 24 chr17 33890950 33891155 -55613398 + MIR SINE MIR 21 230 -32 2445 83 0 0 chr17 33891571 33891873 -55612680 - AluY SINE Alu -9 302 1 505 224 0 10 chr17 33892176 33892274 -55612279 + MIR SINE MIR 45 141 -121 229 167 0 0 chr17 33892537 33892579 -55611974 - MLT1J LTR MaLR -338 173 132 928 64 0 0 chr17 33892666 33892791 -55611762 - L1PA5 LINE L1 0 6154 6030 255 315 14 14 chr17 33893129 33893202 -55611351 - L2 LINE L2 -56 3216 3144 259 325 98 56 chr17 33893270 33893576 -55610977 + L2 LINE L2 2430 2756 -558 2191 121 0 0 chr17 33893576 33893881 -55610672 + AluSc SINE Alu 1 305 -4 259 325 98 56 chr17 33893881 33893950 -55610603 + L2 LINE L2 2756 2821 -493 252 388 69 47 chr17 33894033 33894353 -55610200 + L2 LINE L2 2946 3272 0 * 710 323 146 16 chr17 33894352 33894783 -55609770 - L3 LINE CR1 -175 1402 916 276 299 150 14 chr17 33895010 33895157 -55609396 - MIR SINE MIR -10 252 86 2134 208 30 132 chr17 33895194 33896173 -55608380 - L1ME3 LINE L1 -30 6132 5254 376 312 71 30 chr17 33896458 33896753 -55607800 - L1ME LINE L1 -482 5639 5333 339 316 44 71 chr17 33897264 33897652 -55606901 - L2 LINE L2 -5 3308 2620 365 367 94 0 chr17 33898953 33899133 -55605420 - L2 LINE L2 -56 3216 3020 219 227 0 45 chr17 33899453 33899519 -55605034 + CT-rich Low_complexity Low_complexity 3 65 0 318 322 46 40 chr17 33899532 33899706 -55604847 - MLT1K LTR MaLR -240 348 174 2092 144 17 6 chr17 33899708 33900054 -55604499 + MER47A DNA MER2_type 1 350 -16 1832 169 10 10 chr17 33900054 33900350 -55604203 + AluJb SINE Alu 1 296 -16 404 333 88 54 chr17 33900471 33901153 -55603400 - L2 LINE L2 -1640 1674 970 209 189 0 0 chr17 33901386 33901423 -55603130 + CT-rich Low_complexity Low_complexity 1 37 0 2454 87 0 6 chr17 33901755 33902067 -55602486 - AluSx SINE Alu -2 310 1 21 57 0 0 chr17 33902839 33902874 -55601679 + AT_rich Low_complexity Low_complexity 1 35 0 226 167 0 21 chr17 33902874 33902922 -55601631 + (CA)n Simple_repeat Simple_repeat 2 48 0 703 78 39 39 chr17 33903129 33903309 -55601244 + (TA)n Simple_repeat Simple_repeat 1 180 0 1693 162 3 21 chr17 33903328 33903612 -55600941 + AluJo SINE Alu 12 290 -22 23 33 0 0 chr17 33903624 33903654 -55600899 + AT_rich Low_complexity Low_complexity 1 30 0 334 186 29 49 chr17 33903928 33904030 -55600523 + L1ME4a LINE L1 5964 6063 -58 881 164 68 0 chr17 33904502 33904679 -55599874 - MER3 DNA MER1_type 0 209 21 1697 166 7 30 chr17 33905582 33905883 -55598670 + AluJo SINE Alu 4 297 -15 1921 154 3 3 chr17 33906413 33906699 -55597854 - AluSx SINE Alu -26 286 1 863 195 169 16 chr17 33907058 33907365 -55597188 + L1MC4 LINE L1 7688 8041 -1 6689 18 3 0 chr17 33907942 33908710 -55595843 + L1PA2 LINE L1 5382 6151 -4 22 70 0 0 chr17 33909340 33909383 -55595170 + AT_rich Low_complexity Low_complexity 1 43 0 210 37 0 0 chr17 33909888 33909915 -55594638 + (CAA)n Simple_repeat Simple_repeat 2 28 0 261 334 173 20 chr17 33909937 33910278 -55594275 + L2 LINE L2 1214 1606 -1708 1817 132 39 27 chr17 33910506 33910839 -55593714 - MER1B DNA MER1_type 0 337 1 1283 201 122 30 chr17 33912317 33912710 -55591843 - L1ME3A LINE L1 -9 6161 5733 479 326 129 29 chr17 33913352 33913941 -55590612 + L2 LINE L2 1541 2188 -1126 309 308 105 50 chr17 33914112 33914342 -55590211 + MIR SINE MIR 16 256 -6 2400 70 0 7 chr17 33914431 33914732 -55589821 + AluY SINE Alu 1 299 -12 335 351 48 12 chr17 33915220 33915385 -55589168 - L3 LINE CR1 -12 1565 1395 1994 209 62 22 chr17 33915389 33915925 -55588628 - L1MC4 LINE L1 -245 7797 7241 1369 226 185 31 chr17 33915931 33916472 -55588081 - L1MC4 LINE L1 -959 7083 6460 469 314 186 9 chr17 33916720 33916946 -55587607 - L3 LINE CR1 -219 1358 1093 771 257 158 54 chr17 33916952 33917504 -55587049 + MLT1L LTR MaLR 7 615 0 2359 89 10 3 chr17 33918210 33918514 -55586039 - AluY SINE Alu -5 306 1 1846 150 7 14 chr17 33918888 33919182 -55585371 + AluJb SINE Alu 1 292 -20 363 302 101 57 chr17 33919225 33919523 -55585030 + L2 LINE L2 2942 3252 -61 235 237 150 46 chr17 33919569 33919742 -55584811 + L1ME4a LINE L1 5839 6029 -92 185 306 222 14 chr17 33920027 33920171 -55584382 - MER5B DNA MER1_type 0 178 5 2403 85 0 0 chr17 33971324 33971630 -55532923 - AluSq SINE Alu -7 306 1 316 344 104 32 chr17 33972972 33973347 -55531206 - L2 LINE L2 -36 3236 2835 2139 118 0 0 chr17 33976816 33977120 -55527433 - AluSx SINE Alu -8 304 1 2212 103 3 6 chr17 33978353 33978664 -55525889 + AluSx SINE Alu 1 310 -2 372 222 160 28 chr17 33979731 33979875 -55524678 - MER103 DNA DNA -2 164 2 777 285 109 8 chr17 33980494 33980750 -55523803 + MER102b DNA MER1_type 50 331 -10 1788 134 36 0 chr17 33981003 33981280 -55523273 + AluJb SINE Alu 1 287 -25 22 0 0 0 chr17 33981285 33981307 -55523246 + AT_rich Low_complexity Low_complexity 1 22 0 364 219 79 18 chr17 33982818 33982932 -55521621 + MIR SINE MIR 17 137 -125 274 323 73 0 chr17 33983528 33983624 -55520929 - L2 LINE L2 -9 3263 3161 806 133 0 16 chr17 33983803 33983931 -55520622 + AluJb SINE Alu 161 286 -26 344 330 28 0 chr17 33984085 33984191 -55520362 - MIR SINE MIR -104 158 50 381 191 18 73 chr17 33984283 33984393 -55520160 + MER112 DNA MER1_type 148 251 -9 233 287 139 33 chr17 33984546 33984668 -55519885 - L2 LINE L2 -4 3309 3175 232 324 28 19 chr17 33984956 33985064 -55519489 - L2 LINE L2 -463 2851 2743 548 240 118 14 chr17 33985104 33985477 -55519076 - L1M4 LINE L1 -653 5521 5107 181 247 75 32 chr17 33985716 33985809 -55518744 - L2 LINE L2 -260 3012 2916 1137 275 116 73 chr17 33985809 33986866 -55517687 - L2 LINE L2 -43 3229 2148 267 241 13 25 chr17 33986914 33986993 -55517560 + L2 LINE L2 3220 3297 -16 662 0 0 13 chr17 33987246 33987325 -55517228 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1758 166 0 16 chr17 33987325 33987629 -55516924 - AluJb SINE Alu -11 301 1 413 274 36 135 chr17 33988353 33988471 -55516082 - L2 LINE L2 0 3272 3195 671 216 58 23 chr17 33988471 33988642 -55515911 - MER5B DNA MER1_type 0 178 2 413 274 36 135 chr17 33988642 33988797 -55515756 - L2 LINE L2 -77 3195 3026 527 240 75 27 chr17 33988936 33989082 -55515471 + MER63A DNA MER1_type 58 210 0 232 341 79 43 chr17 33989379 33989543 -55515010 + L2 LINE L2 3113 3282 -31 23 0 0 0 chr17 33989567 33989590 -55514963 + AT_rich Low_complexity Low_complexity 1 23 0 207 116 70 0 chr17 33989609 33989652 -55514901 + T-rich Low_complexity Low_complexity 1 46 0 4714 28 0 2 chr17 33989654 33990197 -55514356 - L1PA5 LINE L1 -3 6151 5610 280 264 81 11 chr17 33990214 33990301 -55514252 + MIR SINE MIR 6 98 -164 207 69 0 0 chr17 33990305 33990334 -55514219 + (TG)n Simple_repeat Simple_repeat 1 29 0 199 357 14 0 chr17 33990335 33990405 -55514148 + MIR SINE MIR 183 253 -9 2039 130 0 0 chr17 33990413 33990705 -55513848 + AluSx SINE Alu 1 292 -20 2248 109 41 49 chr17 33991769 33992136 -55512417 + THE1B LTR MaLR 1 364 0 1406 159 41 25 chr17 33992235 33992342 -55512211 - L1MA4 LINE L1 -2 6298 6194 2787 112 40 7 chr17 33992342 33992762 -55511791 - MER57B LTR ERV1 0 434 1 1406 159 41 25 chr17 33992762 33992969 -55511584 - L1MA4 LINE L1 -106 6194 5979 205 283 61 10 chr17 33993181 33993280 -55511273 - MIR SINE MIR -77 131 28 493 287 82 49 chr17 33993539 33993745 -55510808 - MIR SINE MIR -17 245 34 817 217 42 0 chr17 33994476 33994642 -55509911 - MIR SINE MIR -58 204 32 443 252 19 65 chr17 33994682 33994783 -55509770 + MIR SINE MIR 49 142 -120 1771 137 7 23 chr17 33994783 33995082 -55509471 + AluJo SINE Alu 1 294 -18 443 252 19 65 chr17 33995082 33995135 -55509418 + MIR SINE MIR 142 196 -66 259 270 151 63 chr17 33995236 33995362 -55509191 - MIR3 SINE MIR -2 206 70 1089 248 42 17 chr17 33995362 33995816 -55508737 + MLT1J LTR MaLR 1 509 -2 312 321 28 0 chr17 33996325 33996434 -55508119 - L1MC4 LINE L1 0 8042 7931 21 0 0 0 chr17 33996632 33996653 -55507900 + AT_rich Low_complexity Low_complexity 1 21 0 383 199 25 7 chr17 33996653 33996791 -55507762 - L1MB8 LINE L1 -341 5837 5695 377 250 11 22 chr17 33996839 33996931 -55507622 + MER58B DNA MER1_type 1 91 -250 2071 116 30 0 chr17 33996978 33997280 -55507273 + AluSx SINE Alu 1 311 -1 2462 141 25 0 chr17 33997289 33997694 -55506859 - L1MB3 LINE L1 -7 6176 5762 1154 165 93 0 chr17 33997694 33997930 -55506623 + MER58B DNA MER1_type 84 341 0 244 333 11 0 chr17 33997942 33998032 -55506521 - L1MB3 LINE L1 -526 5644 5554 1543 173 19 10 chr17 33998181 33998488 -55506065 + AluJo SINE Alu 1 310 -2 496 100 11 11 chr17 33998906 33998996 -55505557 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 1717 179 3 0 chr17 33999023 33999319 -55505234 - AluJb SINE Alu -15 297 1 234 191 0 0 chr17 33999319 33999366 -55505187 + CT-rich Low_complexity Low_complexity 3 49 0 998 149 45 68 chr17 33999368 33999589 -55504964 - AluJo SINE Alu -13 299 84 341 282 12 12 chr17 34000719 34000804 -55503749 - L2 LINE L2 0 3272 3188 2092 119 0 0 chr17 34001071 34001365 -55503188 - AluSx SINE Alu -16 296 3 192 77 0 0 chr17 34002348 34002374 -55502179 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 268 37 37 chr17 34002642 34002724 -55501829 - MIR SINE MIR -171 91 10 292 244 99 46 chr17 34003043 34003174 -55501379 - MIR SINE MIR -7 255 118 410 281 90 6 chr17 34003928 34004095 -55500458 + HERVI LTR ERV1 187 367 -6282 527 288 35 39 chr17 34004332 34004561 -55499992 + HERVI LTR ERV1 776 1003 -6782 2693 57 0 0 chr17 34004777 34005110 -55499443 - L1PA5 LINE L1 -3875 2271 1939 25552 42 2 6 chr17 34005110 34009016 -55495537 + L1PA5 LINE L1 2263 6154 0 831 310 63 28 chr17 34009016 34009632 -55494921 + HERVI LTR ERV1 1299 1936 -5849 488 194 108 23 chr17 34009633 34009762 -55494791 + LTR18B LTR ERVL 353 492 -122 1939 320 17 28 chr17 34009783 34010721 -55493832 + HERVI LTR ERV1 4829 5756 -2029 379 236 34 34 chr17 34010946 34011065 -55493488 + HERVI LTR ERV1 3035 4857 -1792 1651 300 63 44 chr17 34011441 34012191 -55492362 + HERVI LTR ERV1 5290 6024 -1761 2088 110 0 10 chr17 34012191 34012490 -55492063 - AluSx SINE Alu -16 296 1 1651 300 63 44 chr17 34012490 34012949 -55491604 + HERVI LTR ERV1 6024 7647 -138 298 333 18 35 chr17 34013579 34013693 -55490860 - MIR3 SINE MIR -48 160 49 1006 235 28 5 chr17 34013713 34013926 -55490627 - MER20 DNA MER1_type -1 218 1 1417 136 86 76 chr17 34013951 34014253 -55490300 + AluSx SINE Alu 5 309 -3 182 312 39 26 chr17 34014473 34014550 -55490003 - MIR SINE MIR -84 178 101 1639 170 7 20 chr17 34015051 34015351 -55489202 - AluJo SINE Alu -16 296 1 253 344 76 23 chr17 34015354 34015485 -55489068 - MIR3 SINE MIR -67 141 4 234 128 0 0 chr17 34016197 34016236 -55488317 + (T)n Simple_repeat Simple_repeat 1 39 0 6991 17 0 0 chr17 34016274 34017055 -55487498 + L1PA2 LINE L1 5369 6149 -6 24 0 0 0 chr17 34017060 34017084 -55487469 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 34017144 34017166 -55487387 + AT_rich Low_complexity Low_complexity 1 22 0 2147 108 3 13 chr17 34017257 34017571 -55486982 - AluSx SINE Alu -1 311 1 980 229 176 49 chr17 34017571 34017761 -55486792 - L1MD2 LINE L1 -13 6346 6182 312 27 0 0 chr17 34017761 34017798 -55486755 + (TG)n Simple_repeat Simple_repeat 2 38 0 1357 112 182 8 chr17 34017798 34018040 -55486513 - AluSx SINE Alu -28 284 1 980 229 176 49 chr17 34018040 34018154 -55486399 - L1MD2 LINE L1 -176 6183 6002 223 336 196 16 chr17 34018552 34018802 -55485751 - L2 LINE L2 -466 2848 2554 577 253 112 25 chr17 34019165 34019406 -55485147 - MIR SINE MIR 0 262 1 778 37 9 9 chr17 34019573 34019680 -55484873 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 307 162 0 54 chr17 34019717 34019758 -55484795 - MLT2B1 LTR ERVL 0 520 483 315 85 0 0 chr17 34019758 34019805 -55484748 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 307 162 0 54 chr17 34019805 34019837 -55484716 - MLT2B1 LTR ERVL -37 483 451 * 2240 123 3 3 chr17 34019816 34020126 -55484427 - THE1B LTR MaLR -54 310 1 10846 97 28 38 chr17 34020126 34021721 -55482832 - THE1B-int LTR MaLR 0 1580 1 180 111 0 0 chr17 34021734 34021761 -55482792 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr17 34021763 34021796 -55482757 + (TTCCC)n Simple_repeat Simple_repeat 2 34 0 2086 130 0 3 chr17 34021804 34022112 -55482441 - AluSp SINE Alu -6 307 1 2657 102 3 3 chr17 34022113 34022465 -55482088 - THE1B LTR MaLR -12 352 1 196 175 32 0 chr17 34022466 34022529 -55482024 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 1522 190 98 73 chr17 34022529 34022551 -55482002 - MLT2B1 LTR ERVL -40 480 460 1728 151 10 22 chr17 34022551 34022863 -55481690 - AluJo SINE Alu -4 308 1 1522 190 98 73 chr17 34022863 34023308 -55481245 - MLT2B1 LTR ERVL -60 460 1 609 250 7 9 chr17 34024082 34024227 -55480326 - MER5B DNA MER1_type -1 177 47 432 318 8 0 chr17 34024641 34024770 -55479783 - MIR SINE MIR -49 213 84 216 273 39 26 chr17 34024806 34024883 -55479670 - MIR SINE MIR -94 114 37 282 163 0 20 chr17 34024929 34024978 -55479575 - MER5B DNA MER1_type -16 162 115 2024 143 19 46 chr17 34024978 34025231 -55479322 + L1MB1 LINE L1 5338 5579 -589 1953 141 0 0 chr17 34025231 34025521 -55479032 + AluSg1 SINE Alu 3 292 -17 2024 143 19 46 chr17 34025521 34025638 -55478915 + L1MB1 LINE L1 5579 5698 -470 1708 138 39 116 chr17 34025638 34025815 -55478738 + THE1C LTR MaLR 1 131 -244 1756 121 67 11 chr17 34025815 34026097 -55478456 - AluSx SINE Alu -14 298 1 1708 138 39 116 chr17 34026097 34026325 -55478228 + THE1C LTR MaLR 131 375 0 9641 107 15 37 chr17 34026326 34027746 -55476807 - THE1C-int LTR MaLR -191 1389 1 1873 123 55 76 chr17 34027746 34028129 -55476424 - THE1C LTR MaLR 0 375 1 2181 147 25 98 chr17 34028129 34028189 -55476364 + L1MB1 LINE L1 5694 5757 -411 2651 165 7 2 chr17 34028189 34028613 -55475940 + MSTB LTR MaLR 1 426 0 2181 147 25 98 chr17 34028613 34028896 -55475657 + L1MB1 LINE L1 5757 5990 -178 2254 109 0 0 chr17 34028896 34029208 -55475345 + AluSx SINE Alu 1 312 0 2181 147 25 98 chr17 34029208 34029375 -55475178 + L1MB1 LINE L1 5990 6168 0 255 183 70 84 chr17 34029384 34029455 -55475098 - MER5B DNA MER1_type -48 130 61 403 310 146 9 chr17 34029510 34029736 -55474817 - MIR SINE MIR 0 262 6 206 330 50 10 chr17 34029869 34029969 -55474584 + L3 LINE CR1 1333 1436 -141 474 101 0 0 chr17 34030839 34030908 -55473645 + (TG)n Simple_repeat Simple_repeat 1 69 0 203 0 37 0 chr17 34031347 34031374 -55473179 + (GA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 34031432 34031454 -55473099 + (A)n Simple_repeat Simple_repeat 1 22 0 270 267 67 9 chr17 34031483 34031588 -55472965 + MIR SINE MIR 120 230 -32 202 382 96 38 chr17 34031701 34031994 -55472559 - L2 LINE L2 -9 3263 2954 545 295 101 9 chr17 34033484 34033701 -55470852 - MIR SINE MIR -23 239 3 223 282 112 53 chr17 34034095 34034283 -55470270 - L2 LINE L2 -2782 532 334 204 125 0 0 chr17 34035003 34035035 -55469518 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 2227 96 0 3 chr17 34035451 34035753 -55468800 + AluSx SINE Alu 1 301 -11 263 244 116 0 chr17 34035769 34035855 -55468698 - L2 LINE L2 -4 3309 3214 186 382 9 27 chr17 34035841 34035951 -55468602 + MIR SINE MIR 37 144 -118 * 288 0 0 0 chr17 34036558 34036590 -55467963 + (TG)n Simple_repeat Simple_repeat 2 33 0 204 111 0 0 chr17 34036606 34036642 -55467911 + (CA)n Simple_repeat Simple_repeat 2 37 0 764 156 45 96 chr17 34037341 34037540 -55467013 + MER53 DNA DNA 1 189 0 319 263 25 34 chr17 34038451 34038569 -55465984 - MIR SINE MIR -60 202 86 26 64 0 0 chr17 34038662 34038709 -55465844 + AT_rich Low_complexity Low_complexity 1 47 0 4683 165 25 21 chr17 34038709 34038901 -55465652 - L1PB4 LINE L1 -2 6154 5964 1830 132 36 7 chr17 34038901 34039182 -55465371 - AluSg SINE Alu -21 289 1 4683 165 25 21 chr17 34039182 34039824 -55464729 - L1PB4 LINE L1 -192 5964 5326 1797 159 7 3 chr17 34039824 34040120 -55464433 - AluJb SINE Alu -15 297 1 4683 165 25 21 chr17 34040120 34040908 -55463645 - L1PB4 LINE L1 -830 5326 4523 321 335 92 42 chr17 34041376 34041713 -55462840 + L2 LINE L2 2461 2814 -500 185 345 202 0 chr17 34041830 34041949 -55462604 + L2 LINE L2 2838 2980 -333 193 324 125 17 chr17 34042160 34042336 -55462217 + L2 LINE L2 2312 2506 -808 567 74 0 53 chr17 34042420 34042515 -55462038 - L1PA5 LINE L1 0 6154 6065 615 89 0 0 chr17 34042506 34042585 -55461968 - AluJb SINE Alu -18 294 216 440 160 13 27 chr17 34042578 34042653 -55461900 - AluJb SINE Alu -128 184 111 * 505 297 121 62 chr17 34042655 34042978 -55461575 + L2 LINE L2 2970 3311 -2 333 252 44 117 chr17 34043320 34043526 -55461027 + MIR SINE MIR 66 256 -6 226 245 0 19 chr17 34043662 34043715 -55460838 + GA-rich Low_complexity Low_complexity 3 54 0 250 305 58 65 chr17 34044123 34044196 -55460357 - MER117 DNA MER1_type -44 153 81 2081 125 35 0 chr17 34044196 34044485 -55460068 - AluSx SINE Alu -13 299 1 250 305 58 65 chr17 34044485 34044565 -55459988 - MER117 DNA MER1_type -116 81 1 332 313 90 0 chr17 34044593 34044737 -55459816 - MIR SINE MIR -83 179 23 196 294 193 8 chr17 34044874 34044993 -55459560 + L2 LINE L2 2897 3037 -235 1328 87 3 9 chr17 34045075 34045305 -55459248 + (TTTC)n Simple_repeat Simple_repeat 1 231 -367 180 0 0 0 chr17 34045305 34045325 -55459228 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1328 87 3 9 chr17 34045325 34045498 -55459055 + (TTTC)n Simple_repeat Simple_repeat 231 598 0 186 133 0 0 chr17 34045516 34045546 -55459007 + (TTTC)n Simple_repeat Simple_repeat 4 33 0 2365 99 0 0 chr17 34045551 34045855 -55458698 - AluSc SINE Alu 0 309 6 399 198 58 12 chr17 34045901 34045987 -55458566 + L2 LINE L2 3177 3266 -6 1217 137 11 6 chr17 34046926 34047101 -55457452 - AluJb SINE Alu -136 176 1 333 345 27 0 chr17 34047253 34047363 -55457190 - MIR SINE MIR -50 212 100 586 250 23 52 chr17 34047403 34047566 -55456987 - MIR3 SINE MIR -11 197 38 2373 86 3 10 chr17 34047566 34047880 -55456673 + AluSx SINE Alu 1 312 0 207 100 0 0 chr17 34049234 34049264 -55455289 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 180 292 21 0 chr17 34049882 34049930 -55454623 + L2 LINE L2 2118 2166 -1148 397 323 30 15 chr17 34050086 34050219 -55454334 + MIR3 SINE MIR 30 164 -44 2086 188 12 60 chr17 34050241 34050406 -55454147 + MLT1D LTR MaLR 15 186 -319 2149 130 0 0 chr17 34050406 34050698 -55453855 + AluSx SINE Alu 1 292 -20 2086 188 12 60 chr17 34050698 34051048 -55453505 + MLT1D LTR MaLR 186 505 0 253 306 19 37 chr17 34051314 34051422 -55453131 - MIR SINE MIR -62 146 41 192 250 54 18 chr17 34051508 34051564 -55452989 - MIR SINE MIR -130 78 21 241 256 12 12 chr17 34052390 34052472 -55452081 + A-rich Low_complexity Low_complexity 3 84 0 343 290 155 25 chr17 34054070 34054270 -55450283 - MIR SINE MIR -12 250 25 237 227 227 0 chr17 34054655 34054721 -55449832 + MIR SINE MIR 63 143 -65 182 231 51 0 chr17 34054717 34054756 -55449797 + L2 LINE L2 3210 3250 -22 * 303 306 25 69 chr17 34057536 34057696 -55446857 + MER5B DNA MER1_type 25 177 -1 297 298 30 96 chr17 34057844 34058042 -55446511 + MIR3 SINE MIR 17 201 -7 375 268 6 22 chr17 34058528 34058707 -55445846 + (TG)n Simple_repeat Simple_repeat 1 176 0 207 0 0 0 chr17 34059041 34059064 -55445489 + (TC)n Simple_repeat Simple_repeat 2 24 0 215 158 0 18 chr17 34059085 34059142 -55445411 + GA-rich Low_complexity Low_complexity 1 56 0 477 244 49 0 chr17 34059506 34059629 -55444924 - MIR SINE MIR -74 188 60 305 309 24 24 chr17 34060149 34060272 -55444281 - MIR3 SINE MIR -2 206 84 535 302 24 0 chr17 34060573 34060742 -55443811 - MIR3 SINE MIR -7 201 29 258 325 60 0 chr17 34061399 34061516 -55443037 + L2 LINE L2 2583 2706 -608 626 229 19 25 chr17 34061519 34061676 -55442877 - MER3 DNA MER1_type -49 160 5 770 270 68 76 chr17 34061900 34062182 -55442371 - L2 LINE L2 0 3313 3033 851 176 0 0 chr17 34062182 34062313 -55442240 - FLAM_C SINE Alu -1 132 2 770 270 68 76 chr17 34062313 34062412 -55442141 - L2 LINE L2 -280 3033 2935 2428 88 0 10 chr17 34062451 34062759 -55441794 + AluY SINE Alu 1 305 -6 421 300 25 96 chr17 34062765 34063005 -55441548 + L2 LINE L2 3040 3262 -10 1922 159 169 12 chr17 34063826 34064229 -55440324 + MER31B LTR ERV1 1 466 0 286 318 0 24 chr17 34064892 34065018 -55439535 + CT-rich Low_complexity Low_complexity 1 123 0 385 278 76 67 chr17 34065565 34065788 -55438765 - MIR SINE MIR -33 229 5 956 174 18 96 chr17 34066214 34066495 -55438058 - MLT1D LTR MaLR -50 455 197 315 223 124 83 chr17 34066545 34066666 -55437887 + L1ME LINE L1 5698 5823 -298 330 266 83 0 chr17 34066817 34066926 -55437627 - MIR SINE MIR -122 140 23 847 156 8 0 chr17 34067799 34067927 -55436626 - FLAM_A SINE Alu -1 132 4 3593 215 27 23 chr17 34068366 34069355 -55435198 - L1ME2 LINE L1 0 6098 5109 1433 191 30 44 chr17 34069353 34069719 -55434834 - L1ME2 LINE L1 0 6164 5804 * 2750 252 52 41 chr17 34069716 34071686 -55432867 - L1ME2 LINE L1 -1947 4133 1705 2109 150 3 0 chr17 34071686 34071993 -55432560 - AluSx SINE Alu -4 308 1 2750 252 52 41 chr17 34071993 34072219 -55432334 - L1ME2 LINE L1 -4375 1705 1483 1638 149 14 32 chr17 34072233 34072341 -55432212 + AluJo SINE Alu 1 109 -203 7590 118 65 22 chr17 34072341 34073566 -55430987 + MER52C LTR ERV1 2 1278 0 1638 149 14 32 chr17 34073566 34073738 -55430815 + AluJo SINE Alu 109 276 -36 204 40 0 0 chr17 34073743 34073768 -55430785 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1288 283 51 54 chr17 34073793 34074786 -55429767 - L1ME2 LINE L1 -4744 1517 528 637 279 130 43 chr17 34074960 34075405 -55429148 - L1ME2 LINE L1 -5577 493 10 418 216 27 54 chr17 34075450 34075561 -55428992 - MIR SINE MIR -98 164 57 1372 178 114 26 chr17 34075689 34075953 -55428600 - AluJo SINE Alu -25 287 1 521 219 17 25 chr17 34076070 34076189 -55428364 + MIR3 SINE MIR 82 199 -9 1125 87 50 0 chr17 34076197 34076358 -55428195 + L1PA14 LINE L1 5992 6160 -1 207 0 0 0 chr17 34076635 34076658 -55427895 + (T)n Simple_repeat Simple_repeat 1 23 0 335 301 44 18 chr17 34076823 34076936 -55427617 + L3 LINE CR1 1204 1319 -258 622 313 27 40 chr17 34077006 34077230 -55427323 + L3 LINE CR1 1330 1550 -27 233 248 10 109 chr17 34077312 34077413 -55427140 + MIR SINE MIR 54 144 -118 423 239 166 6 chr17 34077633 34077796 -55426757 - L2 LINE L2 -991 2323 2135 359 273 70 64 chr17 34078657 34078844 -55425709 + MIR SINE MIR 18 205 -57 250 279 13 13 chr17 34079040 34079119 -55425434 + CT-rich Low_complexity Low_complexity 5 83 0 198 261 46 15 chr17 34079669 34079734 -55424819 + MIR3 SINE MIR 108 174 -34 282 305 53 11 chr17 34080190 34080285 -55424268 - L2 LINE L2 -13 3300 3202 600 253 27 7 chr17 34080396 34080546 -55424007 + MIR SINE MIR 72 224 -38 230 222 0 0 chr17 34080706 34080751 -55423802 + L2 LINE L2 3269 3313 0 578 191 0 0 chr17 34080835 34080929 -55423624 - L1M1 LINE L1 -7112 453 360 279 182 18 0 chr17 34081059 34081114 -55423439 + MIR SINE MIR 84 139 -69 274 222 0 16 chr17 34081630 34081693 -55422860 - MIR SINE MIR -50 212 151 846 267 29 5 chr17 34081733 34081943 -55422610 - MIR SINE MIR -4 258 44 397 273 147 33 chr17 34082116 34082174 -55422379 - MIR SINE MIR -58 204 154 2369 81 7 0 chr17 34082174 34082469 -55422084 - AluY SINE Alu -13 298 2 397 273 147 33 chr17 34082469 34082545 -55422008 - MIR SINE MIR -108 154 53 267 331 199 7 chr17 34082545 34082681 -55421872 + MIR3 SINE MIR 4 165 -43 236 115 0 77 chr17 34082737 34082789 -55421764 - MER117 DNA MER1_type -35 162 115 751 139 7 7 chr17 34083447 34083591 -55420962 + (TCCA)n Simple_repeat Simple_repeat 1 144 0 2051 123 41 0 chr17 34083613 34083906 -55420647 - AluSx SINE Alu -7 305 1 622 337 46 54 chr17 34083907 34084299 -55420254 - L2 LINE L2 -11 3261 2873 356 259 125 0 chr17 34085177 34085289 -55419264 + MER91C DNA MER1_type 1 126 -14 1972 152 7 3 chr17 34086588 34086885 -55417668 - AluJo SINE Alu -14 298 1 1324 202 79 66 chr17 34087169 34087550 -55417003 + MLT1B LTR MaLR 1 386 -4 301 275 156 0 chr17 34087804 34087913 -55416640 - MIR SINE MIR -110 152 27 492 297 49 46 chr17 34088565 34088627 -55415926 + MIR SINE MIR 23 83 -179 430 233 56 72 chr17 34088627 34088807 -55415746 + MER104 DNA MER2_type 1 177 -3 492 297 49 46 chr17 34088807 34089069 -55415484 + MIR SINE MIR 83 262 0 193 229 156 73 chr17 34089580 34089689 -55414864 + MIR SINE MIR 15 132 -130 535 327 51 0 chr17 34090138 34090294 -55414259 - MIR SINE MIR -94 168 5 349 344 27 6 chr17 34090444 34090581 -55413972 - MIR SINE MIR -65 143 15 532 312 91 20 chr17 34090821 34091020 -55413533 + MIR SINE MIR 34 246 -16 726 266 168 28 chr17 34092047 34092404 -55412149 + MLT1J2 LTR MaLR 44 450 0 230 316 125 37 chr17 34092790 34092926 -55411627 + L2 LINE L2 2595 2742 -572 340 251 66 109 chr17 34093543 34093726 -55410827 + MIR3 SINE MIR 33 207 -1 577 186 0 0 chr17 34094783 34094869 -55409684 - FRAM SINE Alu -38 138 53 501 266 70 13 chr17 34095086 34095128 -55409425 - MIR3 SINE MIR -1 207 169 517 233 34 45 chr17 34095128 34095304 -55409249 + MER5B DNA MER1_type 1 174 -4 501 266 70 13 chr17 34095304 34095419 -55409134 - MIR3 SINE MIR -39 169 41 213 94 0 0 chr17 34096244 34096276 -55408277 + (TG)n Simple_repeat Simple_repeat 2 33 0 382 295 54 48 chr17 34096353 34096519 -55408034 + MER5A DNA MER1_type 18 184 -5 261 247 86 0 chr17 34096602 34096683 -55407870 + MIR3 SINE MIR 98 185 -23 181 255 20 20 chr17 34097421 34097472 -55407081 - MIR SINE MIR -56 206 156 207 133 0 0 chr17 34097716 34097761 -55406792 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 714 261 49 71 chr17 34097928 34098325 -55406228 + L1ME4a LINE L1 5558 5947 -206 38733 46 1 6 chr17 34098413 34103966 -55400587 - L1PA5 LINE L1 -9 6145 623 723 68 0 0 chr17 34103964 34104052 -55400501 - L1PA5 LINE L1 -6048 98 11 * 284 313 53 15 chr17 34104195 34104326 -55400227 + MIR SINE MIR 13 148 -114 1427 217 11 3 chr17 34104434 34104720 -55399833 - AluJo SINE Alu -24 288 1 587 139 19 19 chr17 34104727 34104835 -55399718 - AluJo SINE Alu -178 134 27 241 366 84 0 chr17 34105074 34105216 -55399337 - MIR SINE MIR -63 199 46 345 264 0 22 chr17 34105835 34105926 -55398627 - MIR3 SINE MIR -47 161 73 340 350 133 11 chr17 34106024 34106384 -55398169 - L2 LINE L2 -4 3268 2865 217 207 121 0 chr17 34106537 34106595 -55397958 - L2 LINE L2 -184 3088 3024 379 256 33 0 chr17 34107427 34107517 -55397036 - MER81 DNA DNA -17 97 5 1534 103 42 19 chr17 34107560 34107813 -55396740 + AluSp SINE Alu 64 321 0 6785 230 53 56 chr17 34107863 34109549 -55395004 - L1MEc LINE L1 -2758 3457 1767 340 107 0 173 chr17 34109549 34109587 -55394966 + MADE1 DNA Mariner 2 22 -58 2321 92 3 3 chr17 34109587 34109881 -55394672 - AluSc SINE Alu -15 294 1 340 107 0 173 chr17 34109881 34109917 -55394636 + MADE1 DNA Mariner 22 63 -17 6785 230 53 56 chr17 34109917 34111627 -55392926 - L1MEc LINE L1 -4448 1767 35 441 0 0 0 chr17 34162116 34162165 -55342388 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 414 309 15 0 chr17 34162237 34162438 -55342115 - AluSc SINE Alu -105 204 1 2178 103 0 0 chr17 34162490 34162804 -55341749 + AluSg SINE Alu 1 314 0 250 287 16 90 chr17 34162818 34162940 -55341613 + MER5B DNA MER1_type 66 178 0 509 294 87 16 chr17 34163293 34163477 -55341076 - MIR SINE MIR -34 228 32 * 1081 261 194 36 chr17 34163452 34164297 -55340256 + L2 LINE L2 2333 3292 -21 276 30 0 0 chr17 34164301 34164334 -55340219 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 539 338 89 18 chr17 34164661 34164886 -55339667 + MIR SINE MIR 21 261 -1 238 288 0 38 chr17 34165471 34165551 -55339002 - MIR3 SINE MIR -28 180 104 660 249 58 23 chr17 34165791 34165964 -55338589 + MIR SINE MIR 70 248 -14 1950 151 3 0 chr17 34165965 34166276 -55338277 + AluJb SINE Alu 1 312 0 209 209 0 0 chr17 34166362 34166405 -55338148 - MIR SINE MIR -109 153 111 248 217 0 0 chr17 34167267 34167313 -55337240 - L2 LINE L2 -13 3300 3255 1051 316 55 16 chr17 34167315 34167748 -55336805 + L2 LINE L2 2852 3301 -12 261 0 0 0 chr17 34167899 34167928 -55336625 + (T)n Simple_repeat Simple_repeat 1 29 0 268 300 45 0 chr17 34168939 34169049 -55335504 + LTR67 LTR ERVL 439 553 -4 206 260 82 14 chr17 34169068 34169141 -55335412 - L2 LINE L2 -50 3222 3145 806 292 58 53 chr17 34169646 34170006 -55334547 - L2 LINE L2 0 3313 2952 267 79 0 0 chr17 34170649 34170687 -55333866 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 122 0 24 chr17 34171532 34171573 -55332980 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 180 20 20 chr17 34171941 34171991 -55332562 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 398 314 26 26 chr17 34172246 34172402 -55332151 + MIR SINE MIR 97 252 -10 246 381 0 0 chr17 34173093 34173177 -55331376 + MIR SINE MIR 154 237 -25 244 279 75 125 chr17 34173292 34173772 -55330781 + L2 LINE L2 2352 2807 -507 1330 211 52 36 chr17 34173985 34174350 -55330203 + MSTD LTR MaLR 1 371 -25 4322 222 20 46 chr17 34174357 34175387 -55329166 + MSTD-int LTR MaLR 2 1005 -730 305 317 16 8 chr17 34175490 34175613 -55328940 + MIR SINE MIR 136 259 -3 280 353 17 17 chr17 34175617 34175736 -55328817 - MIR SINE MIR -124 138 20 383 314 121 29 chr17 34176842 34177081 -55327472 - L3 LINE CR1 -7 1570 1310 238 208 21 21 chr17 34177264 34177312 -55327241 + MIR SINE MIR 32 79 -129 975 346 122 22 chr17 34177383 34178333 -55326220 + L2 LINE L2 2228 3272 0 818 222 68 11 chr17 34178857 34179033 -55325520 + MER5A DNA MER1_type 1 186 -3 295 320 125 30 chr17 34179057 34179257 -55325296 + MIR SINE MIR 31 249 -13 674 310 58 4 chr17 34179773 34179999 -55324554 + MIR SINE MIR 8 245 -17 1938 120 10 13 chr17 34180287 34180587 -55323966 + AluSx SINE Alu 1 299 -13 386 294 48 55 chr17 34180605 34180751 -55323802 - L2 LINE L2 0 3272 3128 688 247 237 23 chr17 34180761 34181065 -55323488 + MLT1I LTR MaLR 41 409 0 249 368 24 16 chr17 34181818 34182068 -55322485 + L2 LINE L2 2494 2745 -569 655 297 106 43 chr17 34182171 34182501 -55322052 + L2 LINE L2 2899 3254 -18 1677 145 16 36 chr17 34182501 34182805 -55321748 - AluJb SINE Alu -14 298 1 655 297 106 43 chr17 34182805 34182824 -55321729 + L2 LINE L2 3254 3270 -2 239 261 0 68 chr17 34182842 34182930 -55321623 - MIR SINE MIR -71 191 110 199 286 0 0 chr17 34183969 34184011 -55320542 - L2 LINE L2 -16 3256 3215 225 205 0 0 chr17 34184219 34184258 -55320295 - Charlie4 DNA MER1_type -1920 41 3 958 163 37 5 chr17 34184269 34184459 -55320094 + L1MA8 LINE L1 6091 6286 -5 510 258 16 8 chr17 34184604 34184728 -55319825 - L2 LINE L2 -2 3311 3187 187 221 247 13 chr17 34184735 34184812 -55319741 - L2 LINE L2 -241 3031 2937 25 0 0 0 chr17 34185499 34185524 -55319029 + AT_rich Low_complexity Low_complexity 1 25 0 474 332 79 5 chr17 34185746 34185936 -55318617 - MIR SINE MIR -6 256 53 392 306 34 27 chr17 34187323 34187470 -55317083 + MIR SINE MIR 22 169 -93 932 212 103 87 chr17 34187577 34188002 -55316551 - MLT1C LTR MaLR -23 444 13 1406 279 72 21 chr17 34188037 34188521 -55316032 - L2 LINE L2 -398 2916 2408 486 260 26 35 chr17 34189209 34189365 -55315188 - MIR SINE MIR -54 154 15 602 322 24 15 chr17 34190081 34190286 -55314267 + MIR SINE MIR 56 262 0 319 304 11 11 chr17 34190306 34190398 -55314155 - MIR SINE MIR -55 153 62 1687 229 73 42 chr17 34191623 34192173 -55312380 + L1ME1 LINE L1 114 680 -5716 308 120 0 20 chr17 34192184 34192234 -55312319 - MER58A DNA MER1_type 0 224 176 9117 88 19 23 chr17 34192234 34192336 -55312217 + HSMAR1 DNA Mariner 1 102 -1185 1881 144 0 10 chr17 34192336 34192635 -55311918 - AluSx SINE Alu -16 296 1 9117 88 19 23 chr17 34192635 34193818 -55310735 + HSMAR1 DNA Mariner 102 1280 -7 757 234 5 43 chr17 34193821 34194005 -55310548 - MER58A DNA MER1_type -47 177 1 3192 239 68 49 chr17 34194006 34195359 -55309194 + L1ME1 LINE L1 687 2065 -4331 808 200 42 36 chr17 34195379 34195544 -55309009 + MER20 DNA MER1_type 54 219 0 1438 217 91 28 chr17 34195546 34196188 -55308365 + L1ME1 LINE L1 2059 2689 -3526 * 2433 228 41 36 chr17 34196186 34196983 -55307570 + L1ME1 LINE L1 4107 4907 -1308 2857 221 18 53 chr17 34196988 34197801 -55306752 + L1ME1 LINE L1 5463 6403 0 504 158 0 0 chr17 34197815 34197910 -55306643 + GA-rich Low_complexity Low_complexity 3 97 0 357 227 23 23 chr17 34198090 34198178 -55306375 - MLT1L LTR MaLR -337 278 191 208 306 28 14 chr17 34198277 34198349 -55306204 + CT-rich Low_complexity Low_complexity 3 75 0 1430 110 0 31 chr17 34198441 34198760 -55305793 + AluSq SINE Alu 64 375 0 547 236 70 85 chr17 34199714 34199973 -55304580 + LTR16C LTR ERVL 26 280 -211 384 238 40 10 chr17 34199996 34200097 -55304456 - MER5A DNA MER1_type -77 112 9 368 283 98 15 chr17 34200100 34200305 -55304248 + LTR16C LTR ERVL 270 491 0 180 343 35 56 chr17 34200451 34200594 -55303959 + L2 LINE L2 2919 3058 -214 199 327 0 65 chr17 34200643 34200750 -55303803 + MIR SINE MIR 114 213 -49 361 287 74 0 chr17 34201628 34201736 -55302817 + MIR SINE MIR 71 186 -76 25 0 0 0 chr17 34201825 34201850 -55302703 + AT_rich Low_complexity Low_complexity 1 25 0 337 277 66 18 chr17 34201997 34202107 -55302446 - MIR SINE MIR -62 146 37 181 371 9 35 chr17 34202172 34202288 -55302265 + MIR SINE MIR 63 175 -87 271 339 161 0 chr17 34202485 34202597 -55301956 - MIR SINE MIR -113 149 20 363 44 0 0 chr17 34202619 34202664 -55301889 + (ATG)n Simple_repeat Simple_repeat 2 46 0 407 208 77 174 chr17 34203318 34203525 -55301028 + MIR3 SINE MIR 22 208 0 336 256 0 13 chr17 34203566 34203644 -55300909 + MIR SINE MIR 2 78 -184 1999 287 68 20 chr17 34203656 34204317 -55300236 + MER115 DNA AcHobo 1 693 0 245 329 0 12 chr17 34204320 34204405 -55300148 + MIR SINE MIR 90 173 -89 1814 147 3 10 chr17 34204405 34204704 -55299849 + AluJb SINE Alu 6 302 -10 372 335 43 22 chr17 34205780 34205965 -55298588 + MIR SINE MIR 50 238 -24 369 218 72 100 chr17 34206212 34206482 -55298071 + L2 LINE L2 2780 3048 -224 186 343 30 0 chr17 34206582 34206649 -55297904 + L2 LINE L2 3194 3262 -10 1997 226 148 35 chr17 34206656 34207671 -55296882 + L2 LINE L2 2170 3312 -1 2673 139 4 88 chr17 34207735 34208117 -55296436 + MER66A LTR ERV1 8 338 -140 1455 179 50 17 chr17 34208117 34208419 -55296134 + AluJb SINE Alu 1 312 0 2673 139 4 88 chr17 34208419 34208546 -55296007 + MER66A LTR ERV1 338 474 -4 767 239 62 112 chr17 34210971 34211472 -55293081 + MLT1K LTR MaLR 1 476 0 243 296 15 22 chr17 34211852 34211987 -55292566 - MER103 DNA DNA -31 135 2 189 367 166 0 chr17 34212774 34212913 -55291640 - MIR SINE MIR -54 208 47 213 282 122 38 chr17 34213344 34213475 -55291078 + MIR SINE MIR 12 153 -109 251 274 48 57 chr17 34213525 34213649 -55290904 - L2 LINE L2 -8 3305 3183 244 261 0 15 chr17 34213746 34213811 -55290742 - MIR SINE MIR -108 154 91 267 324 20 29 chr17 34213862 34213964 -55290589 - MIR SINE MIR -56 206 106 1470 248 137 20 chr17 34214049 34214488 -55290065 + LTR16C LTR ERVL 1 490 -1 871 283 138 40 chr17 34214829 34215125 -55289428 + L2 LINE L2 2844 3196 -117 231 61 0 0 chr17 34215125 34215158 -55289395 + (TTA)n Simple_repeat Simple_repeat 1 33 0 871 283 138 40 chr17 34215158 34215288 -55289265 + L2 LINE L2 3196 3312 -1 321 311 0 9 chr17 34215336 34215442 -55289111 + LTR16C LTR ERVL 311 415 -76 278 306 82 0 chr17 34215519 34215617 -55288936 - MIR SINE MIR -152 110 5 1209 173 28 5 chr17 34215881 34216095 -55288458 - MER20 DNA MER1_type 0 219 1 252 341 132 0 chr17 34216098 34216189 -55288364 + L2 LINE L2 3199 3301 -12 206 136 23 0 chr17 34216200 34216244 -55288309 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 586 293 89 16 chr17 34217725 34217916 -55286637 - MER63A DNA MER1_type 0 210 6 405 330 96 14 chr17 34218386 34218595 -55285958 - MIR SINE MIR -17 245 20 2083 179 97 26 chr17 34218618 34219081 -55285472 + MLT1D LTR MaLR 2 497 -8 318 248 76 48 chr17 34219363 34219468 -55285085 + MIR3 SINE MIR 9 116 -92 562 245 194 0 chr17 34221096 34221235 -55283318 - MER5A DNA MER1_type -8 181 16 365 373 45 0 chr17 34221301 34221502 -55283051 - MIR SINE MIR -17 245 36 452 288 109 24 chr17 34221556 34222181 -55282372 + L1ME4a LINE L1 5342 6040 -81 2361 41 7 7 chr17 34222222 34222517 -55282036 - AluY SINE Alu -16 295 1 343 289 88 66 chr17 34223140 34223548 -55281005 - L2 LINE L2 -429 2885 2469 427 273 203 12 chr17 34224140 34224355 -55280198 + MIR SINE MIR 1 252 -10 183 263 0 0 chr17 34225207 34225245 -55279308 + L2 LINE L2 3217 3254 -18 181 288 51 59 chr17 34225805 34225923 -55278630 - MIR SINE MIR -6 256 140 290 324 56 0 chr17 34225975 34226083 -55278470 - MIR SINE MIR -37 225 112 553 249 220 22 chr17 34226730 34227003 -55277550 - L3 LINE CR1 -96 1481 1155 533 270 69 37 chr17 34227028 34227219 -55277334 + MIR SINE MIR 30 226 -36 1701 144 7 18 chr17 34227338 34227650 -55276903 + AluJb SINE Alu 1 309 0 293 262 12 12 chr17 34227716 34227800 -55276753 + MIR SINE MIR 53 136 -72 21 0 0 0 chr17 34227860 34227881 -55276672 + AT_rich Low_complexity Low_complexity 1 21 0 1843 164 67 15 chr17 34228747 34229150 -55275403 + L1MB8 LINE L1 5754 6177 -1 2205 100 6 3 chr17 34229731 34230042 -55274511 - AluSx SINE Alu 0 312 1 183 100 0 0 chr17 34230238 34230268 -55274285 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 599 304 145 19 chr17 34230434 34230953 -55273600 + L2 LINE L2 2712 3313 0 243 245 0 0 chr17 34231754 34231807 -55272746 + (CA)n Simple_repeat Simple_repeat 1 53 0 210 91 0 0 chr17 34232604 34232637 -55271916 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 244 242 16 0 chr17 34233252 34233314 -55271239 + L1MB5 LINE L1 5711 5773 -586 950 198 62 5 chr17 34233344 34233536 -55271017 + MIR SINE MIR 58 260 -2 273 339 91 0 chr17 34234314 34234479 -55270074 - MER115 DNA AcHobo -475 218 39 192 315 74 0 chr17 34234933 34234987 -55269566 - L2 LINE L2 -5 3267 3210 1501 202 17 38 chr17 34235046 34235392 -55269161 + MLT1A2 LTR MaLR 5 343 -31 318 26 0 0 chr17 34235401 34235440 -55269113 + (GTATG)n Simple_repeat Simple_repeat 3 41 0 250 267 0 89 chr17 34235943 34236044 -55268509 + L2 LINE L2 3222 3313 0 1105 164 44 103 chr17 34236127 34236468 -55268085 - MER33 DNA MER1_type 0 324 4 972 278 13 0 chr17 34236982 34237216 -55267337 - MIR SINE MIR -21 241 5 803 184 6 25 chr17 34237524 34237687 -55266866 + L1MB5 LINE L1 6015 6174 0 200 194 0 0 chr17 34238624 34238660 -55265893 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 299 257 55 37 chr17 34239064 34239173 -55265380 + MIR3 SINE MIR 78 188 -20 * 483 268 105 52 chr17 34239170 34239323 -55265230 + L3 LINE CR1 1414 1574 -3 294 290 51 56 chr17 34239818 34239991 -55264562 + MIR SINE MIR 3 172 -62 1191 244 56 95 chr17 34240550 34240847 -55263706 - L2 LINE L2 0 3313 3006 2026 79 4 0 chr17 34240847 34241113 -55263440 - AluSg SINE Alu -18 292 26 1541 140 0 0 chr17 34241119 34241369 -55263184 - AluSx SINE Alu 0 309 60 1191 244 56 95 chr17 34241369 34241766 -55262787 - L2 LINE L2 -312 3001 2623 248 266 137 24 chr17 34242129 34242253 -55262300 + MIR SINE MIR 123 260 -2 327 292 80 0 chr17 34242405 34242518 -55262035 - MIR SINE MIR -67 195 74 1827 95 73 4 chr17 34242518 34242792 -55261761 + AluSp SINE Alu 1 293 -20 1244 181 128 105 chr17 34243149 34243509 -55261044 - MLT1C LTR MaLR -10 457 84 1616 177 20 7 chr17 34243509 34243808 -55260745 + AluJo SINE Alu 1 303 -9 1244 181 128 105 chr17 34243808 34243894 -55260659 - MLT1C LTR MaLR -383 84 1 763 115 8 217 chr17 34243899 34244036 -55260517 - MLT1C-int LTR MaLR -5 1366 1300 2091 107 0 7 chr17 34244036 34244316 -55260237 + AluSc SINE Alu 22 299 -10 763 115 8 217 chr17 34244316 34244422 -55260131 - MLT1C-int LTR MaLR -71 1300 1174 1871 175 27 30 chr17 34245239 34245605 -55258948 + MLT1A1 LTR MaLR 1 365 0 240 130 0 0 chr17 34246324 34246370 -55258183 + (TG)n Simple_repeat Simple_repeat 2 47 0 288 0 0 0 chr17 34246591 34246623 -55257930 + (TG)n Simple_repeat Simple_repeat 1 32 0 470 279 146 31 chr17 34246965 34247219 -55257334 + Charlie2 DNA MER1_type 25 307 -2555 750 213 33 5 chr17 34247362 34247573 -55256980 + Charlie2a DNA MER1_type 1465 1681 -1181 252 319 88 11 chr17 34247709 34247800 -55256753 + MIR3 SINE MIR 75 172 -36 363 280 16 24 chr17 34248579 34248704 -55255849 + LTR67 LTR ERVL 432 555 -2 747 112 22 0 chr17 34248704 34248838 -55255715 + (TCCA)n Simple_repeat Simple_repeat 4 140 0 484 294 85 14 chr17 34249081 34249320 -55255233 - MIR SINE MIR -7 255 3 418 263 79 0 chr17 34249334 34249448 -55255105 + MIR3 SINE MIR 83 205 -3 326 331 72 50 chr17 34249532 34249713 -55254840 - L1MEd LINE L1 -5510 609 425 1067 103 0 6 chr17 34250013 34250187 -55254366 + (TTCC)n Simple_repeat Simple_repeat 3 175 0 241 319 36 72 chr17 34250739 34250905 -55253648 + L2 LINE L2 2600 2759 -555 482 358 144 5 chr17 34251243 34251458 -55253095 - MIR SINE MIR -14 248 4 2135 305 48 36 chr17 34251515 34252834 -55251719 + L2 LINE L2 1972 3311 -2 529 178 0 22 chr17 34252992 34253127 -55251426 + (CAT)n Simple_repeat Simple_repeat 3 134 0 366 275 73 39 chr17 34253135 34253313 -55251240 - MIR SINE MIR 0 262 79 535 192 96 0 chr17 34254063 34254167 -55250386 - MIR SINE MIR -66 196 83 441 293 75 42 chr17 34254293 34254505 -55250048 - MIR SINE MIR -10 252 34 316 271 47 23 chr17 34254510 34254639 -55249914 + MIR SINE MIR 75 206 -56 359 290 65 32 chr17 34254703 34254827 -55249726 - MIR SINE MIR -59 149 22 489 260 8 39 chr17 34255030 34255157 -55249396 + MER5B DNA MER1_type 50 172 -6 292 264 163 47 chr17 34255172 34255301 -55249252 - MIR3 SINE MIR -59 149 6 300 309 0 0 chr17 34255929 34256013 -55248540 + MIR SINE MIR 35 118 -90 184 244 0 0 chr17 34256215 34256260 -55248293 - L2 LINE L2 -303 2969 2925 324 259 12 12 chr17 34256529 34256610 -55247943 + L2 LINE L2 3191 3271 -1 277 253 10 30 chr17 34256630 34256729 -55247824 + (TGAA)n Simple_repeat Simple_repeat 3 99 0 382 267 200 67 chr17 34257391 34257541 -55247012 + MER5A DNA MER1_type 14 183 -6 210 333 0 0 chr17 34257633 34257687 -55246866 - L2 LINE L2 -257 3056 3003 441 222 114 30 chr17 34257723 34257886 -55246667 + MIR SINE MIR 14 184 -67 420 339 38 35 chr17 34258406 34258695 -55245858 + L2 LINE L2 2904 3193 -120 812 153 174 0 chr17 34258765 34258909 -55245644 + FRAM SINE Alu 1 162 -14 209 280 31 10 chr17 34258909 34258998 -55245555 - MER5A DNA MER1_type -60 129 26 222 37 0 0 chr17 34259125 34259152 -55245401 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 287 320 49 25 chr17 34259204 34259326 -55245227 - L2 LINE L2 -8 3264 3140 812 214 7 0 chr17 34260011 34260165 -55244388 + AluJo SINE Alu 1 155 -157 375 225 180 0 chr17 34260231 34260342 -55244211 + MIR SINE MIR 105 235 -27 245 249 21 107 chr17 34261512 34261662 -55242891 + MIR SINE MIR 55 191 -71 248 169 17 51 chr17 34262173 34262232 -55242321 + MIR3 SINE MIR 115 171 -37 * 295 336 0 48 chr17 34262207 34262332 -55242221 - MIR3 SINE MIR -75 133 15 1453 178 22 70 chr17 34262568 34262851 -55241702 - MLT1D LTR MaLR -2 503 208 375 60 0 0 chr17 34262851 34262901 -55241652 + (TG)n Simple_repeat Simple_repeat 1 50 0 1453 178 22 70 chr17 34262901 34262915 -55241638 - MLT1D LTR MaLR -297 208 195 2019 117 4 0 chr17 34262915 34263179 -55241374 - AluSq SINE Alu -48 265 1 1453 178 22 70 chr17 34263179 34263427 -55241126 - MLT1D LTR MaLR -310 195 5 624 183 32 32 chr17 34263719 34263845 -55240708 + MER5A DNA MER1_type 8 133 -56 266 283 35 71 chr17 34264027 34264140 -55240413 + MIR3 SINE MIR 5 113 -95 379 268 105 7 chr17 34264346 34264499 -55240054 + MIR SINE MIR 84 251 -11 194 209 0 0 chr17 34264465 34264508 -55240045 + L2 LINE L2 3222 3264 -8 * 368 269 120 23 chr17 34265041 34265170 -55239383 + MIR SINE MIR 2 139 -69 203 184 105 0 chr17 34265382 34265420 -55239133 + L2 LINE L2 3221 3262 -10 465 346 56 19 chr17 34266080 34266294 -55238259 + MIR SINE MIR 24 245 -17 394 235 0 0 chr17 34266348 34266429 -55238124 - MIR SINE MIR -3 259 179 681 330 80 42 chr17 34266875 34267327 -55237226 + L2 LINE L2 2804 3272 0 235 278 173 28 chr17 34267529 34267730 -55236823 - MIR SINE MIR -16 246 1 325 306 99 63 chr17 34268838 34269060 -55235493 - L2 LINE L2 -463 2851 2622 405 0 0 0 chr17 34269120 34269165 -55235388 + (CA)n Simple_repeat Simple_repeat 2 46 0 688 229 51 25 chr17 34269170 34269327 -55235226 - MIR SINE MIR -94 168 8 206 291 146 0 chr17 34270022 34270132 -55234421 + MIR SINE MIR 63 188 -74 180 0 0 0 chr17 34271366 34271386 -55233167 + (T)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr17 34272528 34272569 -55231984 + GC_rich Low_complexity Low_complexity 1 41 0 192 125 0 0 chr17 34272586 34272618 -55231935 + (CAG)n Simple_repeat Simple_repeat 3 34 0 34 42 0 0 chr17 34272676 34272724 -55231829 + GC_rich Low_complexity Low_complexity 1 48 0 31 26 0 0 chr17 34273687 34273725 -55230828 + GC_rich Low_complexity Low_complexity 1 38 0 270 248 31 37 chr17 34274208 34274369 -55230184 + (TG)n Simple_repeat Simple_repeat 2 161 0 398 192 11 50 chr17 34274976 34275158 -55229395 + (CATA)n Simple_repeat Simple_repeat 4 178 0 458 294 61 92 chr17 34275846 34276108 -55228445 + L2 LINE L2 2982 3235 -37 215 261 0 0 chr17 34276147 34276193 -55228360 - L2 LINE L2 -16 3297 3252 766 144 16 8 chr17 34276263 34276388 -55228165 - FLAM_C SINE Alu -6 127 2 560 242 72 87 chr17 34276509 34276773 -55227780 - MIR SINE MIR -1 261 2 207 0 0 0 chr17 34277072 34277095 -55227458 + (CCA)n Simple_repeat Simple_repeat 3 25 0 586 238 153 127 chr17 34277254 34277633 -55226920 - L3 LINE CR1 -10 1567 1179 1852 156 11 7 chr17 34277947 34278275 -55226278 + AluJb SINE Alu 1 329 0 228 343 15 15 chr17 34278338 34278472 -55226081 + CT-rich Low_complexity Low_complexity 1 134 0 5725 46 26 0 chr17 34278521 34279217 -55225336 - L1PA5 LINE L1 0 6154 5441 3554 45 2 0 chr17 34279217 34279680 -55224873 + L1P LINE L1 4363 4826 -1320 382 301 70 21 chr17 34280275 34280418 -55224135 - MIR3 SINE MIR -48 160 11 228 286 184 0 chr17 34281134 34281232 -55223321 - MIR3 SINE MIR -7 201 86 230 239 104 0 chr17 34281276 34281343 -55223210 - MIR SINE MIR -2 260 187 294 29 0 0 chr17 34281346 34281381 -55223172 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1664 164 0 42 chr17 34281398 34281684 -55222869 - AluJb SINE Alu -38 274 1 513 246 169 0 chr17 34281688 34281830 -55222723 - MIR SINE MIR -66 196 31 263 364 91 0 chr17 34281886 34282062 -55222491 - L2 LINE L2 -18 3295 3104 206 200 0 0 chr17 34283107 34283142 -55221411 + G-rich Low_complexity Low_complexity 3 37 0 284 297 148 0 chr17 34283166 34283267 -55221286 - MIR SINE MIR -30 232 117 442 213 41 57 chr17 34283381 34283503 -55221050 - MIR SINE MIR -109 153 34 249 228 21 28 chr17 34283936 34284081 -55220472 + CT-rich Low_complexity Low_complexity 2 145 0 376 237 47 89 chr17 34284276 34284466 -55220087 + L1ME LINE L1 5601 5782 -339 402 272 52 20 chr17 34286249 34286460 -55218093 - MIR SINE MIR -12 250 32 2505 44 14 0 chr17 34287341 34287634 -55216919 + AluY SINE Alu 1 297 -14 447 259 144 0 chr17 34287746 34287885 -55216668 - MIR SINE MIR -75 187 29 472 272 37 6 chr17 34288563 34288725 -55215828 - MER113 DNA MER1_type? -346 175 9 317 182 52 0 chr17 34289057 34289134 -55215419 - L1MC5 LINE L1 -36 7925 7845 519 224 8 0 chr17 34289175 34289293 -55215260 + MIR SINE MIR 32 149 -73 365 331 114 17 chr17 34290172 34290347 -55214206 + MIR3 SINE MIR 15 206 -2 458 266 209 42 chr17 34290705 34291211 -55213342 - L2 LINE L2 -1 3312 2892 769 153 22 51 chr17 34291211 34291348 -55213205 + FLAM_C SINE Alu 1 133 0 458 266 209 42 chr17 34291348 34291644 -55212909 - L2 LINE L2 -421 2892 2380 377 291 69 32 chr17 34292005 34292209 -55212344 - MIR SINE MIR -42 220 3 3139 246 51 59 chr17 34293094 34293781 -55210772 - L2 LINE L2 -2 3311 2640 1613 244 66 21 chr17 34293781 34294264 -55210289 - MLT1D LTR MaLR 0 505 1 3139 246 51 59 chr17 34294264 34294895 -55209658 - L2 LINE L2 -673 2640 2005 576 207 97 89 chr17 34295298 34295526 -55209027 + MIR SINE MIR 16 259 -3 282 278 26 70 chr17 34295817 34295932 -55208621 + MIR3 SINE MIR 51 160 -48 645 254 32 91 chr17 34296590 34296640 -55207913 - MIR SINE MIR -6 256 205 1663 174 7 0 chr17 34296640 34296927 -55207626 - AluJo SINE Alu -17 295 7 645 254 32 91 chr17 34296927 34297128 -55207425 - MIR SINE MIR -57 205 20 378 292 39 58 chr17 34297242 34297396 -55207157 - MIR SINE MIR -54 208 58 554 298 86 25 chr17 34298326 34298524 -55206029 - MIR SINE MIR -6 256 47 364 327 65 39 chr17 34299810 34299963 -55204590 + L2 LINE L2 2899 3055 -217 510 249 98 46 chr17 34300030 34300315 -55204238 + L1ME4a LINE L1 5820 6119 -2 2190 113 0 13 chr17 34300334 34300645 -55203908 - AluSx SINE Alu -5 307 1 340 212 8 91 chr17 34301150 34301282 -55203271 - L1MC4 LINE L1 0 8042 7922 404 337 149 19 chr17 34301411 34301672 -55202881 + L1MC4a LINE L1 5643 5937 -1871 1990 103 3 36 chr17 34301845 34302147 -55202406 + AluSx SINE Alu 1 292 -20 301 274 89 22 chr17 34302400 34302535 -55202018 + Charlie8 DNA MER1_type 84 227 -2190 438 331 0 7 chr17 34302754 34302890 -55201663 - MIR SINE MIR -58 150 16 682 300 17 35 chr17 34303115 34303345 -55201208 + MIR SINE MIR 33 258 -4 192 290 110 10 chr17 34303330 34303430 -55201123 - MIR SINE MIR -2 260 151 * 940 305 29 61 chr17 34303502 34304026 -55200527 - L2 LINE L2 -2 3311 2805 608 279 0 14 chr17 34304032 34304179 -55200374 - MIR SINE MIR -116 146 2 725 238 41 6 chr17 34305069 34305241 -55199312 - MER5A DNA MER1_type -3 186 9 1004 165 0 6 chr17 34305294 34305458 -55199095 + FRAM SINE Alu 1 159 -17 189 253 391 0 chr17 34306655 34306742 -55197811 - L2 LINE L2 -12 3260 3140 635 232 147 17 chr17 34306927 34307104 -55197449 - MIR SINE MIR -47 215 16 644 161 22 28 chr17 34307619 34307799 -55196754 + GA-rich Low_complexity Low_complexity 2 180 0 252 318 88 55 chr17 34307923 34308140 -55196413 - L2 LINE L2 -6 3307 3084 237 317 24 0 chr17 34308371 34308453 -55196100 + L2 LINE L2 3149 3232 -40 376 298 113 0 chr17 34309236 34309407 -55195146 + MIR SINE MIR 1 191 -68 187 222 0 0 chr17 34309518 34309554 -55194999 + L2 LINE L2 3251 3286 -27 941 275 21 12 chr17 34309613 34309853 -55194700 - MIR SINE MIR -17 245 4 250 310 35 35 chr17 34309947 34310060 -55194493 + MIR SINE MIR 29 141 -67 228 356 67 0 chr17 34310386 34310521 -55194032 + L2 LINE L2 2853 2996 -276 2438 66 16 3 chr17 34310537 34310857 -55193696 + L1PA10 LINE L1 5717 6040 -128 411 319 125 44 chr17 34312308 34312603 -55191950 + L2 LINE L2 2443 2761 -553 1821 158 6 10 chr17 34313021 34313404 -55191149 - AluSx SINE Alu 0 382 1 717 253 48 16 chr17 34313494 34313680 -55190873 + MIR SINE MIR 65 256 -6 377 324 27 0 chr17 34313803 34313914 -55190639 + L2 LINE L2 3182 3295 -18 187 268 0 84 chr17 34314341 34314412 -55190141 + L2 LINE L2 3249 3313 0 203 289 0 19 chr17 34314939 34314991 -55189562 + polypyrimidine Low_complexity Low_complexity 2 52 0 212 289 67 0 chr17 34315280 34315370 -55189183 + L2 LINE L2 2311 2406 -908 182 325 133 50 chr17 34315566 34315686 -55188867 + L2 LINE L2 3134 3263 -9 454 271 110 13 chr17 34316018 34316173 -55188380 + MIR3 SINE MIR 3 172 -36 270 250 11 0 chr17 34316606 34316694 -55187859 + (TA)n Simple_repeat Simple_repeat 1 89 0 478 320 102 31 chr17 34316928 34317153 -55187400 - MIR SINE MIR -18 244 4 411 130 0 0 chr17 34317186 34317263 -55187290 + (TG)n Simple_repeat Simple_repeat 2 78 0 461 291 40 72 chr17 34317841 34318064 -55186489 + MIR SINE MIR 47 262 0 1977 126 0 3 chr17 34318448 34318734 -55185819 + AluSp SINE Alu 1 285 -28 1535 176 0 61 chr17 34318821 34319151 -55185402 + AluJo SINE Alu 1 310 -2 190 366 23 23 chr17 34319856 34319987 -55184566 + MIR SINE MIR 2 132 -130 21 0 0 0 chr17 34320464 34320485 -55184068 + AT_rich Low_complexity Low_complexity 1 21 0 474 306 27 60 chr17 34320775 34321008 -55183545 + MIR SINE MIR 9 245 -17 692 317 33 25 chr17 34321630 34321873 -55182680 + MIR SINE MIR 10 254 -8 275 345 17 8 chr17 34321990 34322109 -55182444 + L2 LINE L2 2667 2786 -528 1101 107 0 0 chr17 34322234 34322383 -55182170 - AluSq/x SINE Alu -164 149 1 315 325 30 93 chr17 34323408 34323645 -55180908 - L2 LINE L2 -41 3231 3010 378 0 0 0 chr17 34323682 34323724 -55180829 + (TG)n Simple_repeat Simple_repeat 2 43 0 1409 143 143 0 chr17 34324792 34325036 -55179517 + AluSx SINE Alu 15 293 -19 1084 104 0 0 chr17 34325299 34325453 -55179100 - L1MA3 LINE L1 0 6305 6152 1127 155 0 0 chr17 34325455 34325629 -55178924 - AluJb SINE Alu -138 174 1 527 125 0 11 chr17 34325633 34325721 -55178832 - L1MA3 LINE L1 -165 6140 6054 299 307 35 9 chr17 34326222 34326336 -55178217 - MIR3 SINE MIR -45 163 47 873 262 61 0 chr17 34326709 34326938 -55177615 - L1ME3 LINE L1 -330 5832 5590 242 229 0 0 chr17 34326962 34327010 -55177543 + L2 LINE L2 3221 3268 -4 194 292 0 0 chr17 34327009 34327057 -55177496 - L3 LINE CR1 -715 862 815 * 449 271 83 14 chr17 34327112 34327256 -55177297 - MIR3 SINE MIR -11 197 44 21 0 0 0 chr17 34327387 34327408 -55177145 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr17 34328353 34328383 -55176170 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 333 312 52 82 chr17 34328384 34328615 -55175938 - L2 LINE L2 -19 3253 3030 2446 224 32 76 chr17 34328856 34329230 -55175323 + L1ME3A LINE L1 5517 5849 -321 2042 97 4 4 chr17 34329230 34329509 -55175044 + AluSx SINE Alu 4 282 -30 2446 224 32 76 chr17 34329509 34329818 -55174735 + L1ME3A LINE L1 5849 6170 0 231 211 88 0 chr17 34330130 34330187 -55174366 + MIR SINE MIR 92 153 -109 639 329 85 65 chr17 34330858 34330917 -55173636 - L2 LINE L2 -6 3266 3210 234 0 0 0 chr17 34330917 34330943 -55173610 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 639 329 85 65 chr17 34330943 34331785 -55172768 - L2 LINE L2 -62 3210 2349 356 254 0 0 chr17 34331808 34331879 -55172674 - MIR SINE MIR -61 147 77 244 275 102 69 chr17 34331971 34332159 -55172394 - MIR SINE MIR -56 206 20 578 242 89 6 chr17 34332214 34332371 -55172182 + MIR SINE MIR 76 245 -17 245 310 133 9 chr17 34333314 34333427 -55171126 - L2 LINE L2 -29 3284 3158 1686 228 68 20 chr17 34333514 34333952 -55170601 + MLT1C LTR MaLR 1 459 -8 379 306 50 58 chr17 34334876 34335122 -55169431 + MIR3 SINE MIR 2 260 -2 255 297 14 0 chr17 34335255 34335329 -55169224 - MIR3 SINE MIR -47 161 87 208 285 46 106 chr17 34335455 34335606 -55168947 + MIR SINE MIR 52 193 -69 222 312 29 80 chr17 34335792 34335930 -55168623 + MIR3 SINE MIR 42 172 -36 359 279 81 50 chr17 34336267 34336428 -55168125 - MIR SINE MIR -77 185 20 281 310 110 28 chr17 34336561 34336706 -55167847 - MIR3 SINE MIR -5 203 47 * 334 260 32 84 chr17 34336700 34336753 -55167800 - MIR SINE MIR -36 226 172 2063 143 43 18 chr17 34336753 34337082 -55167471 + MER1B DNA MER1_type 1 337 0 334 260 32 84 chr17 34337082 34337182 -55167371 - MIR SINE MIR -90 172 81 606 296 101 5 chr17 34337466 34337665 -55166888 - MIR SINE MIR 0 262 45 562 314 6 23 chr17 34337685 34337860 -55166693 + MER5B DNA MER1_type 7 178 0 1375 212 5 19 chr17 34338014 34338351 -55166202 - MER33 DNA MER1_type 0 324 1 2206 116 0 0 chr17 34338397 34338707 -55165846 + AluSx SINE Alu 1 310 -2 723 282 166 15 chr17 34338973 34339448 -55165105 + L1ME4a LINE L1 5564 6110 -11 491 273 99 6 chr17 34340028 34340189 -55164364 - MIR SINE MIR -86 176 1 341 300 101 46 chr17 34341098 34341335 -55163218 - MIR SINE MIR 0 262 13 245 292 56 0 chr17 34341582 34341654 -55162899 - L2 LINE L2 -47 3225 3150 1075 215 18 4 chr17 34342059 34342287 -55162266 - MER96B DNA MER1_type? -186 231 1 398 320 61 7 chr17 34342307 34342454 -55162099 - MIR SINE MIR -19 243 89 238 296 0 10 chr17 34342971 34343053 -55161500 + MIR SINE MIR 3 80 -135 478 273 180 21 chr17 34343054 34343248 -55161305 - MIR SINE MIR -15 247 23 438 283 55 7 chr17 34343226 34343371 -55161182 + MIR SINE MIR 46 197 -65 * 248 214 36 36 chr17 34343369 34343425 -55161128 - L2 LINE L2 -4 3268 3213 * 277 240 217 8 chr17 34344207 34344336 -55160217 - L2 LINE L2 -212 3060 2905 625 175 34 160 chr17 34344371 34344564 -55159989 + MER106A DNA MER1_type 1 217 -19 1725 176 35 3 chr17 34344564 34344883 -55159670 + L1MB2 LINE L1 5840 6168 -3 761 158 13 8 chr17 34344753 34344895 -55159658 + L1MB2 LINE L1 6038 6184 0 625 175 34 160 chr17 34344883 34344957 -55159596 + MER106A DNA MER1_type 217 234 -2 * 800 202 150 0 chr17 34345088 34345281 -55159272 - MER58A DNA MER1_type -2 222 1 189 300 0 0 chr17 34346098 34346158 -55158395 + MIR SINE MIR 94 153 -109 248 269 0 0 chr17 34346228 34346280 -55158273 + L2 LINE L2 3205 3256 -16 581 224 125 0 chr17 34346611 34346763 -55157790 - MER96 DNA MER1_type -4 171 1 476 239 10 81 chr17 34346909 34347106 -55157447 - MER5A DNA MER1_type 0 189 7 303 192 0 0 chr17 34347120 34347172 -55157381 + MER94 DNA DNA 1 52 -82 1032 194 6 0 chr17 34347213 34347388 -55157165 + MER58A DNA MER1_type 47 222 -2 366 123 0 0 chr17 34348092 34348149 -55156404 + (TG)n Simple_repeat Simple_repeat 1 57 0 222 348 25 0 chr17 34348163 34348281 -55156272 + (TG)n Simple_repeat Simple_repeat 2 122 0 260 314 78 93 chr17 34349669 34350013 -55154540 + L2 LINE L2 2928 3266 -6 443 338 19 0 chr17 34350270 34350427 -55154126 + MIR SINE MIR 38 197 -65 400 324 34 14 chr17 34351046 34351194 -55153359 - L2 LINE L2 -3 3310 3160 513 236 40 29 chr17 34351552 34351726 -55152827 - L2 LINE L2 -586 2728 2553 2135 139 0 3 chr17 34351728 34352037 -55152516 + AluSx SINE Alu 1 308 -4 1211 294 253 38 chr17 34352358 34353603 -55150950 - L2 LINE L2 -948 2366 1391 1989 140 7 0 chr17 34353603 34353901 -55150652 + AluSx SINE Alu 2 301 0 1211 294 253 38 chr17 34353901 34354477 -55150076 - L2 LINE L2 -1923 1391 151 367 253 21 0 chr17 34354775 34354870 -55149683 - MER5A DNA MER1_type -84 105 9 902 264 52 8 chr17 34354876 34355126 -55149427 - Charlie8 DNA MER1_type -2156 261 1 2141 107 0 7 chr17 34356180 34356461 -55148092 + AluSx SINE Alu 1 279 -33 585 42 0 0 chr17 34356461 34356533 -55148020 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 348 291 17 8 chr17 34356911 34357028 -55147525 + MIR SINE MIR 73 190 -72 275 315 119 13 chr17 34357831 34358066 -55146487 + L2 LINE L2 2101 2360 -954 187 278 0 19 chr17 34358303 34358357 -55146196 + MIR3 SINE MIR 133 185 -23 242 214 214 27 chr17 34358830 34358942 -55145611 + L2 LINE L2 3137 3269 -3 1818 172 13 17 chr17 34359154 34359456 -55145097 - AluJb SINE Alu -11 301 1 2480 117 20 6 chr17 34359704 34360062 -55144491 - THE1B LTR MaLR -1 363 1 192 302 226 34 chr17 34360129 34360483 -55144070 + L2 LINE L2 2556 2977 -337 1664 130 13 8 chr17 34360924 34361162 -55143391 + AluSx SINE Alu 56 294 -18 607 282 79 59 chr17 34361586 34361926 -55142627 - L2 LINE L2 0 3272 2926 212 325 108 48 chr17 34362032 34362198 -55142355 - MIR SINE MIR -38 224 49 236 163 0 0 chr17 34362813 34362856 -55141697 - MER5A DNA MER1_type 0 189 147 * 276 196 0 18 chr17 34362838 34362894 -55141659 + MER5A DNA MER1_type 100 154 -35 194 265 265 0 chr17 34363128 34363211 -55141342 - MIR SINE MIR -63 145 41 521 245 48 37 chr17 34363301 34363489 -55141064 + MLT1J2 LTR MaLR 11 200 -250 278 295 107 40 chr17 34363529 34363678 -55140875 + MLT1J2 LTR MaLR 290 448 -2 555 316 23 6 chr17 34363686 34363863 -55140690 + MER5A DNA MER1_type 7 186 -3 848 208 187 4 chr17 34363878 34364162 -55140391 + MER58 DNA MER1_type 3 2416 -4 243 200 88 125 chr17 34364700 34364860 -55139693 + MLT1J LTR MaLR 100 253 -258 914 237 48 99 chr17 34365434 34365848 -55138705 + MLT1J LTR MaLR 119 511 0 303 267 0 17 chr17 34366031 34366147 -55138406 - MER113 DNA MER1_type? -397 124 11 257 232 171 0 chr17 34366173 34366255 -55138298 + L2 LINE L2 3175 3270 -2 281 314 88 0 chr17 34367462 34367564 -55136989 - MIR SINE MIR -62 146 36 268 311 78 0 chr17 34368499 34368602 -55135951 + L2 LINE L2 3145 3255 -17 237 254 0 0 chr17 34369112 34369171 -55135382 - MIR SINE MIR -109 153 95 266 289 133 0 chr17 34370069 34370152 -55134401 + MIR3 SINE MIR 72 165 -43 1017 196 14 37 chr17 34370168 34370382 -55134171 + MER2 DNA MER2_type 2 210 -135 22 35 0 0 chr17 34370393 34370422 -55134131 + AT_rich Low_complexity Low_complexity 1 29 0 224 154 19 0 chr17 34370645 34370697 -55133856 + GA-rich Low_complexity Low_complexity 2 54 0 294 29 0 0 chr17 34372173 34372208 -55132345 + (TA)n Simple_repeat Simple_repeat 1 35 0 288 0 0 0 chr17 34372213 34372245 -55132308 + (TG)n Simple_repeat Simple_repeat 2 33 0 185 91 0 30 chr17 34372676 34372709 -55131844 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 333 277 18 0 chr17 34372711 34372823 -55131730 - L1MC3 LINE L1 -1929 5856 5743 354 249 47 35 chr17 34373048 34373217 -55131336 + MIR3 SINE MIR 37 207 -1 347 315 235 7 chr17 34373278 34373567 -55130986 - L2 LINE L2 -20 3252 2898 436 301 39 0 chr17 34374320 34374473 -55130080 - MIR3 SINE MIR -2 206 48 1273 233 18 21 chr17 34374645 34374984 -55129569 + L1MB7 LINE L1 4604 4941 -1205 1149 211 110 36 chr17 34375064 34375449 -55129104 - MER39 LTR ERV1 -87 620 1 3695 209 52 42 chr17 34375449 34375706 -55128847 + L1MB7 LINE L1 4938 5191 -993 1704 180 20 23 chr17 34375706 34376012 -55128541 + AluJo SINE Alu 7 311 -1 3695 209 52 42 chr17 34376012 34376978 -55127575 + L1MB7 LINE L1 5191 6184 0 1916 149 24 3 chr17 34377826 34378121 -55126432 + AluJo SINE Alu 1 301 -11 316 228 43 169 chr17 34378162 34378346 -55126207 - LTR67 LTR ERVL -368 189 29 1932 119 48 10 chr17 34379156 34379449 -55125104 - AluSx SINE Alu -7 305 2 278 258 78 24 chr17 34379549 34379674 -55124879 - MLT1I LTR MaLR -26 406 285 1965 153 0 3 chr17 34379772 34380072 -55124481 - AluSx SINE Alu -13 299 1 329 259 52 43 chr17 34380102 34380218 -55124335 - MLT1J1 LTR MaLR -294 152 36 2130 119 0 26 chr17 34380842 34381144 -55123409 + AluSx SINE Alu 1 294 -18 1174 238 125 66 chr17 34381234 34381792 -55122761 - MLT1E LTR MaLR -2 591 1 373 275 67 13 chr17 34381921 34382070 -55122483 - MIR3 SINE MIR -11 197 41 196 326 41 20 chr17 34382314 34382412 -55122141 + L2 LINE L2 2119 2218 -1096 501 292 106 4 chr17 34382576 34382802 -55121751 - MIR SINE MIR -6 256 8 660 26 0 0 chr17 34382975 34383053 -55121500 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1794 169 7 13 chr17 34383074 34383376 -55121177 - AluSx SINE Alu -12 300 1 358 279 108 25 chr17 34384324 34384482 -55120071 + MIR SINE MIR 33 203 -59 608 304 45 12 chr17 34384661 34384919 -55119634 + MIR SINE MIR 1 261 -1 585 210 60 30 chr17 34385151 34385318 -55119235 - MER5B DNA MER1_type -5 173 2 357 150 0 14 chr17 34385430 34385541 -55119012 + MER96 DNA MER1_type? 1 164 -11 686 198 6 0 chr17 34385711 34385888 -55118665 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 606 196 6 22 chr17 34385909 34386052 -55118501 + (TCCA)n Simple_repeat Simple_repeat 1 142 -34 2061 122 82 20 chr17 34386052 34386395 -55118158 - THE1B LTR MaLR 0 364 1 606 196 6 22 chr17 34386395 34386430 -55118123 + (TCCA)n Simple_repeat Simple_repeat 142 176 0 230 246 14 29 chr17 34386449 34386518 -55118035 - L2 LINE L2 -1 3312 3245 393 273 74 0 chr17 34386905 34387026 -55117527 - MIR3 SINE MIR -1 207 78 490 304 70 43 chr17 34387171 34387415 -55117138 - MIR SINE MIR -11 251 3 230 309 0 0 chr17 34388111 34388179 -55116374 + L2 LINE L2 3200 3267 -5 634 231 14 83 chr17 34388803 34389019 -55115534 + L2 LINE L2 3113 3313 0 599 216 6 0 chr17 34389179 34389341 -55115212 + (ATG)n Simple_repeat Simple_repeat 3 165 0 263 315 41 48 chr17 34389406 34389552 -55115001 - MIR SINE MIR -74 188 45 1001 272 44 26 chr17 34391641 34391983 -55112570 - MLT1I LTR MaLR -52 357 10 4227 98 12 2 chr17 34392980 34393572 -55110981 - L1PA10 LINE L1 0 6168 5571 1128 83 0 0 chr17 34393572 34393716 -55110837 + L1PA10 LINE L1 5403 5546 -622 369 279 113 6 chr17 34394454 34394617 -55109936 - MIR3 SINE MIR -2 206 25 920 194 55 26 chr17 34394817 34395059 -55109494 + L1MB8 LINE L1 5932 6178 0 1827 193 68 68 chr17 34396043 34396159 -55108394 + MER74B LTR ERVL 56 171 -451 2333 87 0 0 chr17 34396159 34396482 -55108071 - AluSg SINE Alu 0 323 1 1827 193 68 68 chr17 34396482 34396869 -55107684 + MER74B LTR ERVL 170 572 -50 843 276 13 13 chr17 34397165 34397390 -55107163 + MIR SINE MIR 17 241 -21 297 298 122 12 chr17 34397777 34397953 -55106600 + MIR SINE MIR 2 197 -65 410 275 11 6 chr17 34398034 34398148 -55106405 - MIR SINE MIR -93 115 3 25 0 0 0 chr17 34398427 34398452 -55106101 + AT_rich Low_complexity Low_complexity 1 25 0 1724 167 0 3 chr17 34399740 34400028 -55104525 + AluSx SINE Alu 1 287 -25 236 159 48 79 chr17 34401717 34401780 -55102773 + L2 LINE L2 3253 3313 0 324 269 35 14 chr17 34401784 34401929 -55102624 + (TGAA)n Simple_repeat Simple_repeat 3 150 0 325 246 18 143 chr17 34402470 34402685 -55101868 + MIR SINE MIR 5 196 -66 292 71 36 0 chr17 34402825 34402881 -55101672 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 509 271 88 11 chr17 34403214 34403395 -55101158 - MIR SINE MIR -31 231 37 418 308 8 0 chr17 34404227 34404360 -55100193 + L2 LINE L2 2509 2642 -672 228 286 116 103 chr17 34404383 34404753 -55099800 + L2 LINE L2 2819 3193 -79 468 265 74 0 chr17 34404762 34404924 -55099629 - MER96 DNA MER1_type -1 174 1 465 278 94 37 chr17 34405722 34405913 -55098640 - L3 LINE CR1 -187 1390 1189 480 35 0 0 chr17 34406361 34406419 -55098134 + (TG)n Simple_repeat Simple_repeat 1 58 0 3136 55 5 0 chr17 34406715 34407112 -55097441 - L1P LINE L1 -999 5147 4749 2696 75 3 3 chr17 34407112 34407454 -55097099 + L1PA7 LINE L1 5805 6153 -1 654 315 69 17 chr17 34407907 34408386 -55096167 + L1MC4a LINE L1 5564 6067 -1741 247 393 52 30 chr17 34408517 34408652 -55095901 - L2 LINE L2 -6 3266 3129 538 273 67 0 chr17 34409025 34409175 -55095378 + MER63A DNA MER1_type 48 207 -3 382 247 62 79 chr17 34409673 34409851 -55094702 + MIR3 SINE MIR 34 208 0 184 291 55 129 chr17 34410175 34410595 -55093958 + L2 LINE L2 2804 3192 -80 262 351 0 0 chr17 34411036 34411130 -55093423 + LTR16A LTR ERVL 329 422 -28 586 300 69 6 chr17 34411468 34411628 -55092925 - MER5B DNA MER1_type -8 170 1 337 289 96 36 chr17 34411631 34411797 -55092756 + MIR SINE MIR 15 190 -72 359 259 0 12 chr17 34412255 34412340 -55092213 + MIR3 SINE MIR 79 162 -46 226 214 0 0 chr17 34413025 34413067 -55091486 + CT-rich Low_complexity Low_complexity 1 42 0 477 289 93 25 chr17 34413333 34413537 -55091016 - MIR SINE MIR -11 251 34 415 241 56 0 chr17 34413528 34413636 -55090917 + L2 LINE L2 3199 3312 -1 * 197 83 28 0 chr17 34414464 34414500 -55090053 + (TTG)n Simple_repeat Simple_repeat 3 39 0 749 314 155 15 chr17 34414858 34415402 -55089151 - L2 LINE L2 -3 3310 2698 968 176 16 39 chr17 34415874 34415914 -55088639 - MER5B DNA MER1_type 0 178 139 2007 232 103 12 chr17 34415914 34416410 -55088143 + MLT1F LTR MaLR 1 541 -1 968 176 16 39 chr17 34416410 34416551 -55088002 - MER5B DNA MER1_type -39 139 1 198 393 40 35 chr17 34417384 34417548 -55087005 - L2 LINE L2 -52 3220 3052 2318 60 0 0 chr17 34417548 34417866 -55086687 - AluY SINE Alu 0 318 1 198 393 40 35 chr17 34417866 34417901 -55086652 - L2 LINE L2 -220 3052 3019 590 280 6 17 chr17 34418742 34418917 -55085636 - MER102b DNA MER1_type -51 290 118 1809 117 11 4 chr17 34419502 34419768 -55084785 + AluSx SINE Alu 1 268 -44 2086 138 21 53 chr17 34420254 34420411 -55084142 + Tigger2a DNA MER2_type 1 161 -2547 1503 157 0 46 chr17 34420411 34420692 -55083861 + AluJo SINE Alu 1 268 -44 2086 138 21 53 chr17 34420692 34420912 -55083641 + Tigger2a DNA MER2_type 161 366 -68 3451 108 6 0 chr17 34420912 34421405 -55083148 + L1PA13 LINE L1 5324 5819 -344 2042 105 40 46 chr17 34421506 34421772 -55082781 + L1PA13 LINE L1 5794 6059 -104 2035 110 23 16 chr17 34421772 34422082 -55082471 + AluSx SINE Alu 1 312 0 2042 105 40 46 chr17 34422082 34422186 -55082367 + L1PA13 LINE L1 6059 6162 -1 915 279 89 58 chr17 34422264 34422314 -55082239 + HAL1b LINE L1 47 94 -1254 383 237 136 17 chr17 34422314 34422468 -55082085 + FLAM_A SINE Alu 1 133 0 915 279 89 58 chr17 34422468 34423172 -55081381 + HAL1b LINE L1 94 824 -524 2366 213 80 81 chr17 34423336 34424256 -55080297 + L1MC5 LINE L1 6480 7418 -543 477 317 0 14 chr17 34424570 34424715 -55079838 - MIR3 SINE MIR -21 187 45 240 212 45 15 chr17 34424794 34424860 -55079693 + MIR3 SINE MIR 87 154 -54 2344 116 140 8 chr17 34424983 34425361 -55079192 + MSTA LTR MaLR 1 428 0 254 303 141 43 chr17 34425439 34425624 -55078929 + L2 LINE L2 2610 2812 -502 347 333 126 67 chr17 34425681 34426038 -55078515 + L2 LINE L2 2895 3272 0 526 295 132 70 chr17 34426904 34427321 -55077232 + L2 LINE L2 2828 3270 -2 21 0 0 0 chr17 34427324 34427345 -55077208 + AT_rich Low_complexity Low_complexity 1 21 0 1450 256 115 56 chr17 34428581 34429150 -55075403 + MLT1G LTR MaLR 3 590 0 372 326 11 43 chr17 34429957 34430141 -55074412 + MIR SINE MIR 54 231 -31 * 683 328 25 4 chr17 34430117 34430352 -55074201 - MIR SINE MIR -11 251 12 3358 141 35 11 chr17 34431388 34431929 -55072624 - MER41C LTR ERV1 0 554 1 183 203 253 38 chr17 34432108 34432187 -55072366 + MIR SINE MIR 53 148 -114 2135 269 33 122 chr17 34433849 34434252 -55070301 + LTR8A LTR ERV1 34 471 -256 1971 127 3 3 chr17 34434252 34434551 -55070002 - AluSx SINE Alu -13 299 1 1450 151 0 8 chr17 34434555 34434823 -55069730 - AluSq SINE Alu 0 314 49 2135 269 33 122 chr17 34434823 34435175 -55069378 + LTR8A LTR ERV1 474 727 0 301 324 29 29 chr17 34435334 34435473 -55069080 - MIR SINE MIR -18 244 106 224 238 95 0 chr17 34435470 34435533 -55069020 - MER5A DNA MER1_type -62 127 59 * 22 0 0 0 chr17 34435578 34435600 -55068953 + AT_rich Low_complexity Low_complexity 1 22 0 2755 242 49 43 chr17 34435608 34436744 -55067809 - L2 LINE L2 -149 3164 2034 664 48 0 0 chr17 34436868 34436952 -55067601 - L1PA5 LINE L1 0 6154 6071 507 335 24 0 chr17 34437009 34437176 -55067377 - MIR SINE MIR -13 249 79 211 149 43 0 chr17 34437290 34437337 -55067216 + (CAT)n Simple_repeat Simple_repeat 3 51 0 500 320 52 21 chr17 34437344 34437538 -55067015 - MIR SINE MIR -15 247 48 1893 138 0 0 chr17 34437578 34437860 -55066693 - AluSx SINE Alu -30 282 1 210 189 0 0 chr17 34438332 34438369 -55066184 + MIR SINE MIR 89 125 -83 340 232 125 54 chr17 34438584 34438752 -55065801 + MIR SINE MIR 24 203 -59 280 149 0 0 chr17 34439423 34439470 -55065083 + MIR SINE MIR 82 128 -134 183 269 30 0 chr17 34439566 34439633 -55064920 + MIR SINE MIR 168 236 -26 565 272 31 31 chr17 34439700 34439891 -55064662 + MIR SINE MIR 47 237 -25 2056 132 0 0 chr17 34440474 34440822 -55063731 + AluSx SINE Alu 2 349 0 183 42 0 0 chr17 34440848 34440872 -55063681 + (ATG)n Simple_repeat Simple_repeat 1 24 0 312 270 161 57 chr17 34440876 34441087 -55063466 - MIR SINE MIR -10 252 20 300 347 146 24 chr17 34442019 34442232 -55062321 + MIR SINE MIR 21 259 -3 307 308 76 41 chr17 34442240 34442412 -55062141 + MIR SINE MIR 10 187 -75 422 302 121 7 chr17 34443095 34443244 -55061309 - MIR SINE MIR -25 237 72 191 374 47 19 chr17 34443238 34443345 -55061208 + L2 LINE L2 3157 3266 -6 * 284 62 0 21 chr17 34443538 34443586 -55060967 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 201 364 10 30 chr17 34443590 34443689 -55060864 + L2 LINE L2 2994 3090 -182 1678 309 136 19 chr17 34444173 34445034 -55059519 + L3 LINE CR1 614 1575 -2 684 324 40 32 chr17 34445449 34445702 -55058851 + MIR SINE MIR 6 260 -2 238 133 0 117 chr17 34446111 34446171 -55058382 - Tigger5 DNA MER2_type -354 1969 1917 225 232 71 0 chr17 34446575 34446631 -55057922 + L2 LINE L2 3186 3245 -27 507 312 135 51 chr17 34446648 34447388 -55057165 + L2 LINE L2 2152 2953 -361 255 31 0 0 chr17 34447454 34447486 -55057067 + (TG)n Simple_repeat Simple_repeat 2 33 0 1377 99 0 0 chr17 34447526 34447698 -55056855 - AluSq SINE Alu -141 172 1 420 265 8 0 chr17 34447699 34447816 -55056737 - MIR SINE MIR -56 206 89 472 176 55 0 chr17 34448120 34448211 -55056342 + MLT1D LTR MaLR 44 139 -366 505 148 0 1 chr17 34448243 34448334 -55056219 + L1MA9 LINE L1 6072 6170 -130 878 240 33 107 chr17 34448343 34448382 -55056171 + MLT1D LTR MaLR 175 215 -288 1560 116 0 18 chr17 34448382 34448653 -55055900 + AluSg/x SINE Alu 73 310 0 878 240 33 107 chr17 34448653 34448884 -55055669 + MLT1D LTR MaLR 215 461 -42 1095 242 5 0 chr17 34449442 34449661 -55054892 + MER58A DNA MER1_type 5 224 0 1872 134 33 11 chr17 34449743 34450055 -55054498 + AluSx SINE Alu 1 318 0 1954 92 4 0 chr17 34450156 34450405 -55054148 + AluSp SINE Alu 53 302 -11 367 315 31 6 chr17 34451401 34451563 -55052990 + MIR SINE MIR 47 212 -50 515 170 0 0 chr17 34452375 34452469 -55052084 + L1MA4 LINE L1 6084 6177 -123 349 61 0 0 chr17 34452469 34452518 -55052035 + Alu SINE Alu 251 299 -3 480 225 8 0 chr17 34452518 34452690 -55051863 + L1MA4 LINE L1 6165 6337 0 224 301 115 64 chr17 34452835 34452901 -55051652 + L2 LINE L2 3150 3211 -102 1633 210 94 44 chr17 34452901 34453378 -55051175 + MLT1D LTR MaLR 3 503 -2 224 301 115 64 chr17 34453378 34453467 -55051086 + L2 LINE L2 3211 3313 0 306 288 125 12 chr17 34453498 34453658 -55050895 + MIR SINE MIR 20 197 -65 2072 130 23 10 chr17 34454349 34454657 -55049896 - AluSx SINE Alu 0 312 1 375 229 28 42 chr17 34454962 34455106 -55049447 + MLT1L LTR MaLR 134 275 -340 690 134 21 49 chr17 34455128 34455270 -55049283 + L1MB3 LINE L1 6042 6179 -4 338 259 38 60 chr17 34455401 34455586 -55048967 + L2 LINE L2 2171 2351 -963 1939 128 24 24 chr17 34455649 34455945 -55048608 - AluSx SINE Alu -16 296 1 276 335 60 20 chr17 34456405 34456605 -55047948 + L2 LINE L2 3106 3313 0 351 233 33 0 chr17 34456865 34456955 -55047598 + MIR SINE MIR 103 195 -67 351 0 0 0 chr17 34457328 34457367 -55047186 + (TG)n Simple_repeat Simple_repeat 1 39 0 1345 248 60 28 chr17 34458212 34458679 -55045874 - L1ME1 LINE L1 -5 6161 5680 1642 194 11 55 chr17 34459224 34459606 -55044947 - MLT1A1 LTR MaLR 0 365 1 2593 139 12 5 chr17 34459780 34460197 -55044356 - L1PA16 LINE L1 -6 6160 5741 431 309 11 11 chr17 34460472 34460650 -55043903 - MIR3 SINE MIR -10 198 21 249 119 0 0 chr17 34461432 34461474 -55043079 + MIR SINE MIR 117 158 -104 590 271 49 22 chr17 34461553 34461778 -55042775 + MIR SINE MIR 32 262 0 189 74 0 0 chr17 34461823 34461850 -55042703 + (T)n Simple_repeat Simple_repeat 1 27 0 199 200 109 0 chr17 34462125 34462180 -55042373 - L2 LINE L2 -54 3259 3199 180 0 0 0 chr17 34462216 34462236 -55042317 + (CTG)n Simple_repeat Simple_repeat 1 20 0 612 316 48 16 chr17 34462284 34462534 -55042019 - MIR SINE MIR -2 260 3 651 232 150 24 chr17 34463070 34463277 -55041276 + MIR SINE MIR 26 258 -4 276 284 42 0 chr17 34463291 34463386 -55041167 + MIR3 SINE MIR 92 190 -18 641 219 96 11 chr17 34465248 34465435 -55039118 - MIR SINE MIR -6 256 54 462 219 84 0 chr17 34466514 34466633 -55037920 - L2 LINE L2 -3 3310 3182 652 229 84 34 chr17 34466779 34466958 -55037595 + MLT1J LTR MaLR 1 188 -323 285 257 0 0 chr17 34468466 34468536 -55036017 + L2 LINE L2 3203 3272 0 1169 57 17 11 chr17 34469041 34469217 -55035336 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 249 33 0 0 chr17 34469249 34469279 -55035274 + (TC)n Simple_repeat Simple_repeat 1 30 0 264 59 0 0 chr17 34469279 34469313 -55035240 + (TA)n Simple_repeat Simple_repeat 1 34 0 2401 102 0 3 chr17 34469952 34470265 -55034288 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 34470675 34470696 -55033857 + AT_rich Low_complexity Low_complexity 1 21 0 7711 61 2 6 chr17 34470696 34471698 -55032855 + L1P LINE L1 4256 5253 -893 930 146 0 0 chr17 34471702 34471832 -55032721 - AluSq/x SINE Alu -182 130 1 22 35 0 0 chr17 34471835 34471864 -55032689 + AT_rich Low_complexity Low_complexity 1 29 0 3045 114 57 64 chr17 34471965 34472543 -55032010 + MER4B LTR ERV1 1 574 -36 26 30 0 0 chr17 34473226 34473259 -55031294 + AT_rich Low_complexity Low_complexity 1 33 0 229 370 0 47 chr17 34473294 34473421 -55031132 - MIR SINE MIR -60 148 28 188 316 51 70 chr17 34474470 34474628 -55029925 - L2 LINE L2 -22 3250 3096 228 364 20 10 chr17 34474855 34475017 -55029536 + MER5A DNA MER1_type 12 186 -3 710 233 6 6 chr17 34475039 34475198 -55029355 - MER5A DNA MER1_type -14 175 17 684 230 95 25 chr17 34476391 34476591 -55027962 - MIR SINE MIR -2 260 47 2320 115 0 0 chr17 34476607 34476911 -55027642 - AluSq SINE Alu -9 304 1 300 292 99 25 chr17 34476985 34477146 -55027407 - MIR SINE MIR -74 188 16 319 203 40 0 chr17 34477546 34477620 -55026933 + MIR SINE MIR 119 195 -67 186 184 0 0 chr17 34478211 34478249 -55026304 + MIR SINE MIR 92 129 -133 307 216 174 79 chr17 34478644 34478677 -55025876 - LTR33 LTR ERVL -4 517 489 2048 122 3 35 chr17 34478677 34478988 -55025565 + AluSx SINE Alu 2 302 -10 307 216 174 79 chr17 34478988 34479144 -55025409 - LTR33 LTR ERVL -32 489 310 602 254 8 0 chr17 34479260 34479390 -55025163 - LTR33 LTR ERVL -372 149 19 252 230 0 58 chr17 34479803 34479890 -55024663 - L1ME4a LINE L1 -74 6047 5966 2141 114 4 0 chr17 34481122 34481427 -55023126 - AluSx SINE Alu 0 306 1 504 302 140 22 chr17 34482258 34482709 -55021844 - L2 LINE L2 -4 3309 2806 212 320 117 47 chr17 34482887 34483487 -55021066 + L2 LINE L2 743 1384 -1930 317 286 13 0 chr17 34483669 34483746 -55020807 + L2 LINE L2 3230 3307 -6 503 250 35 46 chr17 34484679 34484864 -55019689 - MIR SINE MIR -40 168 17 232 272 0 37 chr17 34485660 34485741 -55018812 + MIR SINE MIR 74 151 -111 2172 193 90 9 chr17 34485895 34486362 -55018191 + MLT1D LTR MaLR 1 505 0 998 193 74 4 chr17 34486532 34486776 -55017777 - Charlie5 DNA MER1_type 0 2624 2364 2372 159 62 19 chr17 34486780 34487246 -55017307 + MER66B LTR ERV1 1 486 0 507 310 12 6 chr17 34488375 34488546 -55016007 - MIR SINE MIR -89 173 2 218 318 0 0 chr17 34488562 34488625 -55015928 + L2 LINE L2 3205 3267 -5 240 296 63 14 chr17 34489460 34489561 -55014992 - MIR SINE MIR -60 148 37 * 560 271 26 0 chr17 34489524 34489679 -55014874 + MIR SINE MIR 17 175 -87 2088 159 48 22 chr17 34489679 34490212 -55014341 + MLT2A2 LTR ERVL 1 554 0 390 134 0 15 chr17 34490717 34490784 -55013769 - L1MB2 LINE L1 -2 6169 6104 274 348 62 49 chr17 34540815 34541220 -54963333 + L2 LINE L2 2566 2975 -339 367 245 0 43 chr17 34541325 34541419 -54963134 - L1MC4 LINE L1 -1339 6703 6614 313 277 79 0 chr17 34541334 34541435 -54963118 + L1MC3 LINE L1 6538 6646 -1139 * 257 269 15 0 chr17 34541727 34541794 -54962759 + MIR SINE MIR 62 129 -133 561 287 77 29 chr17 34542007 34542215 -54962338 + MLT1J2 LTR MaLR 74 261 -189 953 211 16 0 chr17 34542215 34542400 -54962153 - MER5A DNA MER1_type -1 188 1 561 287 77 29 chr17 34542400 34542448 -54962105 + MLT1J2 LTR MaLR 261 305 -145 200 204 0 37 chr17 34543759 34543813 -54960740 + MIR SINE MIR 20 71 -137 1311 267 58 47 chr17 34543860 34544393 -54960160 + L2 LINE L2 2781 3313 0 185 333 30 0 chr17 34544394 34544460 -54960093 + MIR3 SINE MIR 138 205 -3 418 301 10 78 chr17 34545969 34546079 -54958474 + MIR SINE MIR 48 141 -121 1883 146 3 7 chr17 34546079 34546387 -54958166 - AluSx SINE Alu -5 307 1 418 301 10 78 chr17 34546387 34546469 -54958084 + MIR SINE MIR 141 227 -35 246 356 139 0 chr17 34546597 34546799 -54957754 - L3 LINE CR1 -90 1487 1258 433 272 37 1 chr17 34547131 34547250 -54957303 - MIR SINE MIR -63 145 42 767 199 0 0 chr17 34547570 34547701 -54956852 - FLAM_A SINE Alu -2 131 1 1698 254 54 8 chr17 34548012 34548585 -54955968 + MLT2F LTR ERVL 3 650 -13 319 225 56 22 chr17 34548630 34548719 -54955834 + L2 LINE L2 2993 3084 -188 473 299 60 16 chr17 34550588 34550772 -54953781 + MIR3 SINE MIR 5 196 -12 200 94 31 0 chr17 34550984 34551016 -54953537 + (TG)n Simple_repeat Simple_repeat 1 33 0 529 276 53 18 chr17 34552028 34552198 -54952355 + MER5B DNA MER1_type 1 176 -2 533 194 200 39 chr17 34552219 34552374 -54952179 + MER5A DNA MER1_type 7 186 -3 393 307 47 13 chr17 34552424 34552574 -54951979 + MIR SINE MIR 94 248 -14 303 226 24 12 chr17 34552600 34552684 -54951869 + MIR SINE MIR 178 262 0 233 288 56 69 chr17 34553696 34553856 -54950697 - MIR SINE MIR -5 257 100 47 44 0 0 chr17 34553856 34553924 -54950629 + AT_rich Low_complexity Low_complexity 1 68 0 389 268 79 73 chr17 34555081 34555245 -54949308 - L2 LINE L2 -6 3266 3102 519 190 0 10 chr17 34555681 34555781 -54948772 - MER20 DNA MER1_type 0 219 121 1717 103 4 0 chr17 34555916 34556150 -54948403 + AluSx SINE Alu 1 235 -77 375 60 0 0 chr17 34556155 34556205 -54948348 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 264 327 105 7 chr17 34556495 34556648 -54947905 - MIR3 SINE MIR -6 202 35 259 301 106 24 chr17 34556714 34556837 -54947716 + MIR3 SINE MIR 76 208 0 314 348 50 12 chr17 34557447 34557608 -54946945 - MIR SINE MIR -75 187 21 497 244 67 62 chr17 34557799 34557992 -54946561 - MIR SINE MIR -47 215 22 2262 72 3 16 chr17 34558123 34558427 -54946126 - AluY SINE Alu -11 300 1 618 266 15 54 chr17 34558626 34558829 -54945724 + MLT1J1 LTR MaLR 252 446 0 1509 271 82 51 chr17 34559012 34559179 -54945374 + L2 LINE L2 2358 2518 -795 531 279 34 24 chr17 34559179 34559387 -54945166 - MER63A DNA MER1_type 0 210 1 1509 271 82 51 chr17 34559387 34559576 -54944977 + L2 LINE L2 2518 2700 -613 1687 145 26 43 chr17 34559576 34559880 -54944673 + AluJb SINE Alu 1 299 -13 1509 271 82 51 chr17 34559880 34560440 -54944113 + L2 LINE L2 2700 3312 -1 642 265 58 5 chr17 34560784 34560973 -54943580 + MIR SINE MIR 57 255 -7 329 264 29 79 chr17 34561323 34561463 -54943090 - MIR3 SINE MIR -71 137 5 199 139 28 0 chr17 34561865 34561901 -54942652 - MIR SINE MIR -118 144 108 327 266 176 43 chr17 34562609 34562842 -54941711 - L2 LINE L2 -100 3172 2909 1754 187 83 31 chr17 34562845 34563289 -54941264 - MLT1C LTR MaLR 0 467 1 288 338 45 59 chr17 34563443 34563665 -54940888 + L2 LINE L2 3046 3264 -8 265 343 29 0 chr17 34564292 34564397 -54940156 - MIR3 SINE MIR -10 198 91 501 289 128 5 chr17 34564714 34564918 -54939635 + MIR SINE MIR 4 232 -30 4550 14 1 0 chr17 34564987 34565767 -54938786 - L1PA2 LINE L1 -390 5765 4985 3481 18 0 0 chr17 34565767 34566151 -54938402 + L1PA2 LINE L1 5764 6155 0 648 265 57 38 chr17 34566487 34566698 -54937855 - MIR SINE MIR -15 247 33 2894 208 16 30 chr17 34566724 34567389 -54937164 - L1ME1 LINE L1 -6 6160 5505 998 217 131 38 chr17 34567454 34567827 -54936726 - HsTC2 DNA Tc2 -2 1896 1313 902 226 36 44 chr17 34567849 34568123 -54936430 - HsTC2 DNA Tc2 -1155 743 472 324 279 27 27 chr17 34568104 34568215 -54936338 - HsTC2 DNA Tc2 -1697 201 91 * 268 271 246 8 chr17 34568349 34568467 -54936086 + MIR SINE MIR 5 150 -112 360 263 105 15 chr17 34568885 34569018 -54935535 - L1ME4a LINE L1 -29 6092 5948 209 346 43 37 chr17 34569054 34569242 -54935311 - L2 LINE L2 -575 2739 2551 245 272 298 31 chr17 34570282 34570473 -54934080 + MIR3 SINE MIR 4 246 -16 267 31 0 0 chr17 34571297 34571329 -54933224 + (TTA)n Simple_repeat Simple_repeat 2 33 0 704 154 0 17 chr17 34571331 34571448 -54933105 - FLAM_A SINE Alu -27 115 1 587 240 5 73 chr17 34571463 34571667 -54932886 - MIR SINE MIR 0 262 73 237 159 0 0 chr17 34572171 34572215 -54932338 + (TG)n Simple_repeat Simple_repeat 1 44 0 180 272 99 62 chr17 34572302 34572383 -54932170 - L2 LINE L2 -298 2974 2891 243 312 54 11 chr17 34575015 34575108 -54929445 - MIR SINE MIR -150 112 16 410 382 26 0 chr17 34575164 34575316 -54929237 - L2 LINE L2 0 3272 3117 408 396 4 11 chr17 34575474 34575744 -54928809 + L2 LINE L2 2387 2654 -660 259 226 65 11 chr17 34575818 34575911 -54928642 - L1MEc LINE L1 -5345 1197 1100 266 31 0 0 chr17 34575911 34575943 -54928610 - LTR13 LTR ERVK 0 1007 976 713 242 167 0 chr17 34576104 34576290 -54928263 - MER58A DNA MER1_type -4 220 4 1439 162 147 4 chr17 34576314 34576573 -54927980 - AluSx SINE Alu -5 297 2 437 415 49 14 chr17 34576793 34577138 -54927415 - L1MEc LINE L1 -6000 825 469 206 357 89 9 chr17 34577140 34577252 -54927301 + L2 LINE L2 2638 2758 -556 199 352 9 67 chr17 34577272 34577377 -54927176 + L2 LINE L2 3174 3272 0 522 308 48 31 chr17 34578224 34578451 -54926102 - MIR SINE MIR -6 256 26 311 345 65 93 chr17 34579618 34579896 -54924657 + L2 LINE L2 3002 3271 -1 361 286 158 0 chr17 34580773 34580949 -54923604 - MIR SINE MIR -43 219 18 331 281 54 42 chr17 34581196 34581363 -54923190 - MIR3 SINE MIR -1 207 39 2604 290 28 6 chr17 34582168 34582668 -54921885 + MER9 LTR ERVK 1 511 0 319 265 176 0 chr17 34582848 34582950 -54921603 - MIR SINE MIR -63 145 26 493 201 158 43 chr17 34583163 34583327 -54921226 + MLT1L LTR MaLR 163 345 -270 347 330 77 10 chr17 34584320 34584514 -54920039 + L2 LINE L2 2815 3021 -251 590 297 161 42 chr17 34584618 34585300 -54919253 - L2 LINE L2 -182 3131 2351 186 276 11 58 chr17 34585994 34586081 -54918472 + L2 LINE L2 2945 3027 -245 246 185 0 37 chr17 34586652 34586706 -54917847 - L2 LINE L2 -1 3312 3261 267 214 0 0 chr17 34587119 34587189 -54917364 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 335 113 16 0 chr17 34587235 34587297 -54917256 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 219 217 0 58 chr17 34587474 34587543 -54917010 + CT-rich Low_complexity Low_complexity 1 65 0 851 243 78 67 chr17 34588186 34588557 -54915996 - MLT1H LTR MaLR -104 445 71 491 305 53 21 chr17 34588810 34588997 -54915556 + L2 LINE L2 3120 3312 -1 21 57 0 0 chr17 34590810 34590845 -54913708 + AT_rich Low_complexity Low_complexity 1 35 0 2020 142 0 0 chr17 34591074 34591384 -54913169 - AluSx SINE Alu -2 310 1 453 311 83 16 chr17 34591621 34591933 -54912620 - L1ME LINE L1 -549 5613 5281 977 179 4 92 chr17 34591933 34592173 -54912380 - MER20 DNA MER1_type 0 219 1 322 268 126 24 chr17 34592394 34592521 -54912032 - MIR SINE MIR -93 169 30 * 385 294 129 6 chr17 34592514 34592677 -54911876 + MIR3 SINE MIR 12 194 -14 252 319 175 0 chr17 34592694 34592854 -54911699 + MIR SINE MIR 63 250 -12 258 259 90 15 chr17 34593773 34593877 -54910676 + MIR SINE MIR 14 127 -81 201 216 0 0 chr17 34593913 34593950 -54910603 + L2 LINE L2 3210 3246 -26 408 274 219 18 chr17 34594016 34594180 -54910373 + MIR SINE MIR 2 198 -64 801 241 0 6 chr17 34594355 34594525 -54910028 + MIR SINE MIR 84 252 -10 201 394 21 0 chr17 34595059 34595153 -54909400 + MER5A DNA MER1_type 72 167 -22 300 291 76 0 chr17 34595855 34595934 -54908619 + MIR3 SINE MIR 102 186 -22 2116 113 3 3 chr17 34596523 34596824 -54907729 + AluSq SINE Alu 1 301 -12 3113 132 175 40 chr17 34597015 34597621 -54906932 - LTR12 LTR ERV1 0 688 1 2164 177 115 65 chr17 34598544 34598960 -54905593 + MLT1E2 LTR MaLR 56 507 -119 4016 120 52 2 chr17 34598960 34599569 -54904984 - MER51C LTR ERV1 0 640 1 2164 177 115 65 chr17 34599569 34599693 -54904860 + MLT1E2 LTR MaLR 507 623 -3 240 263 182 0 chr17 34599743 34599842 -54904711 + L2 LINE L2 3156 3272 0 956 264 54 4 chr17 34599958 34600197 -54904356 + MIR SINE MIR 12 262 0 397 305 0 9 chr17 34601907 34602012 -54902541 + MER81 DNA DNA 11 114 0 200 244 98 37 chr17 34603660 34603742 -54900811 + L2 LINE L2 623 709 -2605 486 294 160 17 chr17 34603879 34604110 -54900443 + L2 LINE L2 2606 2869 -445 293 325 201 0 chr17 34604394 34604548 -54900005 - MLT1L LTR MaLR -123 492 308 241 260 0 0 chr17 34604659 34604709 -54899844 - MLT1L LTR MaLR -446 169 120 496 275 62 38 chr17 34605318 34605478 -54899075 + MIR3 SINE MIR 20 183 -25 348 328 128 57 chr17 34605557 34605908 -54898645 - L2 LINE L2 -3 3310 2935 271 315 95 25 chr17 34606138 34606379 -54898174 - L2 LINE L2 0 3272 3015 2838 186 33 16 chr17 34606399 34606979 -54897574 - L1MB4 LINE L1 -2 6178 5589 336 258 0 49 chr17 34607590 34607753 -54896800 + (CCCCAA)n Simple_repeat Simple_repeat 6 160 0 380 327 64 0 chr17 34608406 34608562 -54895991 - MER117 DNA MER1_type -3 194 29 932 280 115 31 chr17 34608570 34608988 -54895565 + LTR16A1 LTR ERVL 1 453 -4 348 287 26 17 chr17 34609114 34609229 -54895324 - L2 LINE L2 -6 3307 3192 241 321 73 37 chr17 34610379 34610488 -54894065 + MIR3 SINE MIR 93 205 -3 513 254 170 36 chr17 34610533 34610757 -54893796 + MIR SINE MIR 8 261 -1 427 266 18 109 chr17 34611526 34611599 -54892954 - MIR SINE MIR -50 212 134 2361 70 0 0 chr17 34611599 34611897 -54892656 + AluY SINE Alu 1 298 -13 427 266 18 109 chr17 34611897 34611991 -54892562 - MIR SINE MIR -128 134 69 1503 191 3 19 chr17 34611991 34612300 -54892253 + AluJo SINE Alu 1 304 -8 427 266 18 109 chr17 34612300 34612360 -54892193 - MIR SINE MIR -193 69 5 468 325 66 6 chr17 34612650 34612816 -54891737 + MIR SINE MIR 22 197 -65 240 273 0 0 chr17 34613091 34613146 -54891407 - L3b LINE CR1 -420 1163 1109 258 253 13 27 chr17 34613708 34613783 -54890770 + CT-rich Low_complexity Low_complexity 1 74 0 334 257 73 37 chr17 34613920 34614029 -54890524 - MIR SINE MIR -117 145 33 342 296 59 13 chr17 34614724 34614876 -54889677 - MIR3 SINE MIR -13 195 37 201 234 21 21 chr17 34615221 34615268 -54889285 - L3 LINE CR1 -959 618 572 194 258 0 76 chr17 34616125 34616191 -54888362 + MIR SINE MIR 126 186 -76 642 272 193 3 chr17 34616918 34617219 -54887334 + L2 LINE L2 2385 2742 -572 347 102 0 0 chr17 34617228 34617277 -54887276 + MSTD LTR MaLR 1 49 -347 * 1114 196 58 22 chr17 34617273 34617498 -54887055 + MSTD LTR MaLR 153 385 -11 6643 211 90 47 chr17 34617507 34617652 -54886901 + MSTD-int LTR MaLR 2 139 -1596 894 63 79 8 chr17 34617652 34617778 -54886775 + MER85 DNA T2_type 1 135 -4 6643 211 90 47 chr17 34617778 34619289 -54885264 + MSTD-int LTR MaLR 139 1730 -5 1992 160 81 6 chr17 34619294 34619651 -54884902 + MSTD LTR MaLR 1 384 -12 297 209 209 81 chr17 34619679 34619827 -54884726 + L2 LINE L2 2797 2963 -351 180 158 0 0 chr17 34620281 34620319 -54884234 + (TGG)n Simple_repeat Simple_repeat 2 39 0 1165 267 89 22 chr17 34620764 34621135 -54883418 - MLT1J1 LTR MaLR -2 444 49 315 324 0 27 chr17 34621923 34622034 -54882519 - MIR SINE MIR -85 123 16 234 0 0 0 chr17 34622068 34622094 -54882459 + (TC)n Simple_repeat Simple_repeat 1 26 0 237 65 0 0 chr17 34623746 34623777 -54880776 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 293 290 115 91 chr17 34624862 34625148 -54879405 + L3 LINE CR1 1084 1376 -201 199 321 77 42 chr17 34625235 34625403 -54879150 - MIR SINE MIR -54 208 35 651 298 135 30 chr17 34626146 34626767 -54877786 + L2 LINE L2 2552 3237 -76 390 256 6 45 chr17 34626811 34626967 -54877586 + GA-rich Low_complexity Low_complexity 4 153 0 333 100 0 0 chr17 34627109 34627159 -54877394 + (CA)n Simple_repeat Simple_repeat 1 50 0 2030 113 3 0 chr17 34627223 34627507 -54877046 - AluSx SINE Alu -23 289 5 1461 173 32 0 chr17 34627656 34627757 -54876796 + AluJo SINE Alu 21 117 -195 329 0 24 0 chr17 34627757 34627798 -54876755 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1461 173 32 0 chr17 34627798 34627979 -54876574 + AluJo SINE Alu 117 312 0 270 302 143 16 chr17 34628301 34628427 -54876126 + MIR3 SINE MIR 2 143 -65 315 234 50 63 chr17 34628495 34628643 -54875910 - MLT1H LTR MaLR -2 611 431 273 305 95 60 chr17 34628654 34628854 -54875699 - MLT1I LTR MaLR -123 286 80 2145 194 72 23 chr17 34628925 34629358 -54875195 - MLT2B1 LTR ERVL -66 454 1 420 262 97 46 chr17 34629617 34629869 -54874684 + MLT1J1 LTR MaLR 66 325 -84 2125 83 30 10 chr17 34630421 34630721 -54873832 - AluY SINE Alu -5 306 1 759 292 138 48 chr17 34630776 34631213 -54873340 - L1MC4a LINE L1 -223 5898 5425 189 405 0 12 chr17 34631512 34631596 -54872957 + L3 LINE CR1 1431 1513 -64 227 199 199 30 chr17 34631658 34631789 -54872764 - L1ME4a LINE L1 -2 6119 5967 844 272 5 5 chr17 34631851 34632057 -54872496 + MIR SINE MIR 3 208 -54 438 294 140 25 chr17 34632116 34632402 -54872151 - L1ME4a LINE L1 -327 5794 5476 633 90 150 0 chr17 34632653 34632753 -54871800 - L1PA10 LINE L1 -1 6167 6053 445 298 41 0 chr17 34633465 34633586 -54870967 + MIR SINE MIR 4 129 -133 227 239 109 76 chr17 34633754 34633846 -54870707 + LTR33A LTR ERVL 57 151 -372 3577 104 31 2 chr17 34634198 34634715 -54869838 + L1PA15 LINE L1 5624 6155 -10 253 325 167 8 chr17 34634768 34634894 -54869659 + MIR SINE MIR 9 154 -108 779 196 0 0 chr17 34635274 34635407 -54869146 - FLAM_A SINE Alu 0 133 1 320 297 22 114 chr17 34635733 34636053 -54868500 + L2 LINE L2 2769 3058 -214 532 202 0 75 chr17 34636091 34636279 -54868274 + Charlie7 DNA MER1_type 991 1164 -1448 3299 212 43 17 chr17 34636361 34637234 -54867319 + Charlie7 DNA MER1_type 1156 2051 -561 189 0 0 0 chr17 34637293 34637314 -54867239 + (A)n Simple_repeat Simple_repeat 1 21 0 777 310 86 48 chr17 34637934 34638411 -54866142 + L2 LINE L2 2818 3312 -1 522 222 32 8 chr17 34638942 34639068 -54865485 + MIR SINE MIR 131 259 -3 251 319 0 0 chr17 34639129 34639198 -54865355 - L2 LINE L2 -1 3312 3244 232 291 12 35 chr17 34639270 34639356 -54865197 - L2 LINE L2 -223 3049 2966 354 325 53 48 chr17 34639580 34639808 -54864745 + MIR SINE MIR 20 248 -14 394 270 101 42 chr17 34640044 34640269 -54864284 - MIR SINE MIR -11 251 10 1917 111 3 31 chr17 34640291 34640619 -54863934 - AluSc SINE Alu 0 320 1 328 330 98 17 chr17 34641643 34641816 -54862737 + MIR3 SINE MIR 19 205 -3 1508 244 77 35 chr17 34642017 34642178 -54862375 + MLT1F LTR MaLR 4 157 -385 803 26 35 0 chr17 34642178 34642292 -54862261 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 1508 244 77 35 chr17 34642292 34642647 -54861906 + MLT1F LTR MaLR 157 542 0 382 319 30 7 chr17 34643063 34643198 -54861355 + MIR3 SINE MIR 30 167 -41 246 181 83 42 chr17 34643569 34643641 -54860912 + MER113 DNA MER1_type? 445 519 -2 348 324 126 32 chr17 34643702 34644106 -54860447 + L2 LINE L2 2451 2892 -422 305 339 146 37 chr17 34644181 34644476 -54860077 + L2 LINE L2 2942 3268 -4 1190 67 0 0 chr17 34644950 34645100 -54859453 + AluY SINE Alu 150 299 -12 1652 179 3 17 chr17 34645346 34645643 -54858910 - AluJo SINE Alu -14 298 6 536 244 53 84 chr17 34645707 34645969 -54858584 - MIR SINE MIR 0 262 9 180 382 24 0 chr17 34647099 34647222 -54857331 + L2 LINE L2 2634 2759 -555 782 255 34 10 chr17 34647653 34647861 -54856692 + MIR SINE MIR 50 262 0 470 291 0 0 chr17 34648551 34648678 -54855875 + MIR SINE MIR 105 231 -31 274 85 43 0 chr17 34648945 34648992 -54855561 + L3 LINE CR1 1525 1573 -4 718 250 83 0 chr17 34649072 34649288 -54855265 + MIR SINE MIR 2 235 -27 623 213 21 21 chr17 34649642 34649783 -54854770 - FLAM_C SINE Alu -1 142 2 1548 60 0 0 chr17 34651558 34651741 -54852812 - AluY SINE Alu -2 309 127 246 62 0 0 chr17 34651741 34651773 -54852780 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 1053 85 0 0 chr17 34651773 34651903 -54852650 - AluYb8 SINE Alu -186 132 3 210 198 10 125 chr17 34651921 34652017 -54852536 - L2 LINE L2 -94 3219 3135 227 214 36 0 chr17 34652244 34652300 -54852253 - MER116 DNA Mariner 0 80 23 296 322 156 6 chr17 34652301 34652481 -54852072 - MIR SINE MIR -5 257 51 382 276 119 46 chr17 34652922 34653183 -54851370 + L1MC4a LINE L1 5685 5964 -157 245 151 19 0 chr17 34653903 34653956 -54850597 + (CA)n Simple_repeat Simple_repeat 2 55 0 198 270 0 0 chr17 34654053 34654116 -54850437 + CT-rich Low_complexity Low_complexity 1 63 0 263 203 14 0 chr17 34654649 34654718 -54849835 + L1MA8 LINE L1 6221 6290 -1 2679 176 67 75 chr17 34654777 34655508 -54849045 - LTR8A LTR ERV1 -2 725 1 785 316 64 18 chr17 34655792 34656074 -54848479 + LTR16C LTR ERVL 98 392 -99 306 241 138 17 chr17 34658517 34658633 -54845920 - MIR3 SINE MIR -66 142 13 279 279 0 0 chr17 34658900 34658979 -54845574 + MIR SINE MIR 117 195 -67 226 164 36 18 chr17 34659531 34659586 -54844967 + L2 LINE L2 3258 3313 0 532 238 57 66 chr17 34660095 34660172 -54844381 + MER112 DNA MER1_type 5 81 -179 593 189 44 56 chr17 34660172 34660352 -54844201 + MER104 DNA MER2_type 3 180 0 532 238 57 66 chr17 34660352 34660501 -54844052 + MER112 DNA MER1_type 81 229 -31 338 359 51 5 chr17 34660700 34660895 -54843658 + MIR SINE MIR 58 261 -1 266 291 0 0 chr17 34661941 34662020 -54842533 + (TAGG)n Simple_repeat Simple_repeat 4 82 0 195 214 0 0 chr17 34662177 34662219 -54842334 - MIR SINE MIR -114 148 107 475 336 56 22 chr17 34662899 34663131 -54841422 - MIR SINE MIR -17 245 6 251 371 48 6 chr17 34664210 34664377 -54840176 + MIR SINE MIR 89 262 0 200 356 0 0 chr17 34664657 34664730 -54839823 + (TG)n Simple_repeat Simple_repeat 2 74 0 201 368 13 0 chr17 34665367 34665443 -54839110 + L2 LINE L2 2544 2620 -694 311 290 21 0 chr17 34665450 34665543 -54839010 + L2 LINE L2 3219 3313 0 5805 198 45 13 chr17 34665919 34668137 -54836416 + L1MD1 LINE L1 3938 6242 0 180 0 0 0 chr17 34668181 34668201 -54836352 + (CA)n Simple_repeat Simple_repeat 2 21 0 622 201 41 96 chr17 34668212 34668431 -54836122 + L1MD3 LINE L1 7789 7995 0 788 297 55 0 chr17 34669422 34669658 -54834895 - MIR SINE MIR 0 262 14 300 287 68 17 chr17 34669973 34670147 -54834406 + MIR SINE MIR 10 190 -67 235 297 94 14 chr17 34670294 34670432 -54834121 + L2 LINE L2 3006 3154 -159 265 325 60 0 chr17 34670926 34671043 -54833510 - MIR SINE MIR -30 232 109 251 279 116 23 chr17 34671103 34671232 -54833321 + MIR SINE MIR 101 241 -21 762 174 7 7 chr17 34671904 34672042 -54832511 + FLAM_C SINE Alu 6 143 0 189 312 123 14 chr17 34672227 34672365 -54832188 + MIR SINE MIR 89 241 -21 200 111 28 0 chr17 34673308 34673344 -54831209 + GA-rich Low_complexity Low_complexity 2 38 0 230 294 184 15 chr17 34673618 34673754 -54830799 + L2 LINE L2 2926 3084 -188 198 0 0 0 chr17 34674810 34674832 -54829721 + (A)n Simple_repeat Simple_repeat 1 22 0 1411 185 85 48 chr17 34675512 34675767 -54828786 - MLT1A1 LTR MaLR 0 365 92 1968 138 3 26 chr17 34675767 34676072 -54828481 + AluSx SINE Alu 1 298 -14 1411 185 85 48 chr17 34676072 34676168 -54828385 - MLT1A1 LTR MaLR -273 92 1 3524 121 27 109 chr17 34676351 34676641 -54827912 - Tigger3(Golem) DNA MER2_type 0 3029 2717 2326 60 0 7 chr17 34676641 34676925 -54827628 + AluY SINE Alu 1 282 -29 3524 121 27 109 chr17 34676925 34676983 -54827570 - Tigger3(Golem) DNA MER2_type -312 2717 2656 715 205 87 0 chr17 34676983 34677144 -54827409 + FAM SINE Alu 1 175 0 3524 121 27 109 chr17 34677144 34677547 -54827006 - Tigger3(Golem) DNA MER2_type -373 2656 2339 1915 159 74 0 chr17 34677552 34677878 -54826675 - Tigger3(Golem) DNA MER2_type -2679 350 1 210 310 0 0 chr17 34678542 34678600 -54825953 + MIR SINE MIR 78 135 -73 431 322 20 14 chr17 34679113 34679259 -54825294 - MIR SINE MIR -50 212 66 378 257 44 0 chr17 34679261 34679374 -54825179 + MIR SINE MIR 119 236 -26 2204 115 0 7 chr17 34679384 34679729 -54824824 + AluSx SINE Alu 1 312 0 309 151 0 0 chr17 34679762 34679815 -54824738 + CT-rich Low_complexity Low_complexity 2 54 0 473 304 36 6 chr17 34680161 34680329 -54824224 - MIR SINE MIR -70 192 20 235 358 63 31 chr17 34681130 34681384 -54823169 + L2 LINE L2 2831 3092 -180 1302 261 41 22 chr17 34681504 34681918 -54822635 + Charlie7 DNA MER1_type 35 456 -2156 237 345 149 6 chr17 34682219 34682387 -54822166 - MIR SINE MIR -56 206 15 535 242 34 20 chr17 34683668 34683817 -54820736 - MIR SINE MIR -2 260 110 196 121 0 0 chr17 34684119 34684152 -54820401 - L2 LINE L2 -10 3303 3271 2296 153 52 28 chr17 34684649 34684813 -54819740 + Tigger2a DNA MER2_type 1 160 -2548 2776 132 14 5 chr17 34684813 34685237 -54819316 - MSTA LTR MaLR 0 428 1 2296 153 52 28 chr17 34685237 34685496 -54819057 + Tigger2a DNA MER2_type 160 434 0 325 336 29 0 chr17 34685914 34686051 -54818502 + L1MC/D LINE L1 5585 5725 -2083 23 0 0 0 chr17 34686732 34686755 -54817798 + AT_rich Low_complexity Low_complexity 1 23 0 572 272 112 16 chr17 34686822 34687145 -54817408 - HAL1 LINE L1 -111 2396 2043 287 361 58 23 chr17 34687589 34687894 -54816659 - L2 LINE L2 -220 3052 2740 201 309 62 25 chr17 34688062 34688143 -54816410 - MIR3 SINE MIR -1 207 124 256 263 25 12 chr17 34688163 34688243 -54816310 + L1M LINE L1 5321 5401 -2407 248 232 15 0 chr17 34688983 34689057 -54815496 + L1 LINE L1 4769 4843 -1303 1777 185 25 35 chr17 34689266 34689666 -54814887 + MER7C DNA MER2_type 1 396 -206 1340 150 0 0 chr17 34690113 34690313 -54814240 + MER7C DNA MER2_type 390 589 -13 207 204 0 0 chr17 34690335 34690384 -54814169 + (CA)n Simple_repeat Simple_repeat 2 50 0 499 267 66 27 chr17 34690571 34690829 -54813724 + L1MC/D LINE L1 5261 5528 -2280 2105 71 41 34 chr17 34691920 34692214 -54812339 - AluY SINE Alu -15 296 1 3185 172 190 81 chr17 34692471 34693390 -54811163 + LTR28 LTR ERV1 1 1020 0 1229 167 122 45 chr17 34693634 34693921 -54810632 - MLT1A1 LTR MaLR -54 311 3 311 288 91 15 chr17 34694207 34694339 -54810214 + MIR SINE MIR 104 245 -17 198 91 0 0 chr17 34694345 34694378 -54810175 + (TTG)n Simple_repeat Simple_repeat 1 33 0 255 286 48 12 chr17 34695155 34695239 -54809314 - MIR SINE MIR -127 135 49 951 67 0 0 chr17 34695611 34695730 -54808823 + AluY SINE Alu 180 298 -13 2419 157 36 19 chr17 34696018 34696433 -54808120 + MSTC LTR MaLR 1 422 -6 2192 87 35 0 chr17 34696504 34696670 -54807883 - AluY SINE Alu -14 297 115 233 29 0 29 chr17 34696670 34696705 -54807848 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2192 87 35 0 chr17 34696705 34696825 -54807728 - AluY SINE Alu -196 115 1 910 250 151 19 chr17 34696989 34697301 -54807252 - MLT1I LTR MaLR 0 409 57 383 325 17 0 chr17 34697551 34697668 -54806885 - L2 LINE L2 -1 3271 3153 339 271 107 8 chr17 34697714 34697836 -54806717 + MIR3 SINE MIR 3 136 -72 475 257 53 5 chr17 34699981 34700168 -54804385 - Zaphod DNA AcHobo 0 4031 3836 198 191 0 0 chr17 34700190 34700232 -54804321 + (TA)n Simple_repeat Simple_repeat 2 43 0 280 305 0 15 chr17 34700250 34700381 -54804172 + (TA)n Simple_repeat Simple_repeat 1 129 0 1543 179 23 29 chr17 34700399 34700748 -54803805 - Zaphod DNA AcHobo -180 3851 3505 776 170 23 2 chr17 34700748 34700892 -54803661 - MSTC LTR MaLR 0 428 213 3335 221 118 47 chr17 34700892 34701902 -54802651 - MSTC-int LTR MaLR -646 1089 6 1212 208 0 0 chr17 34701920 34702127 -54802426 - MSTC LTR MaLR -1 427 221 330 304 82 15 chr17 34702319 34702454 -54802099 + L1MEd LINE L1 703 846 -5273 231 260 41 27 chr17 34702471 34702544 -54802009 + MIR SINE MIR 189 262 0 359 230 368 0 chr17 34704001 34704153 -54800400 + MIR SINE MIR 49 256 -6 934 278 193 24 chr17 34704690 34705171 -54799382 - L2 LINE L2 0 3313 2744 1842 151 0 16 chr17 34705179 34705519 -54799034 - AluJb SINE Alu 0 312 2 3759 116 61 5 chr17 34705942 34706512 -54798041 + LTR43 LTR ERV1 1 602 0 280 287 120 42 chr17 34706519 34706686 -54797867 + MIR3 SINE MIR 15 194 -14 1973 214 46 30 chr17 34707218 34707714 -54796839 + MLT1D LTR MaLR 1 504 -1 237 215 83 107 chr17 34707720 34707841 -54796712 - HAL1 LINE L1 -55 2452 2335 206 244 0 0 chr17 34707926 34707967 -54796586 + (CATATA)n Simple_repeat Simple_repeat 3 43 0 287 83 0 21 chr17 34708057 34708105 -54796448 + (TA)n Simple_repeat Simple_repeat 1 47 0 1509 181 11 14 chr17 34708105 34708392 -54796161 - AluJb SINE Alu -26 286 1 3062 277 133 48 chr17 34708414 34710381 -54794172 - HAL1 LINE L1 -365 2142 9 823 200 45 55 chr17 34711126 34711326 -54793227 + MLT1D LTR MaLR 1 198 -307 740 210 93 19 chr17 34711300 34711514 -54793039 + MLT1A1 LTR MaLR 136 365 0 * 181 200 0 29 chr17 34711747 34711782 -54792771 - L3 LINE CR1 -112 1465 1432 374 341 24 78 chr17 34712149 34712445 -54792108 - L2 LINE L2 0 3272 2993 250 301 94 28 chr17 34712501 34712659 -54791894 - MIR3 SINE MIR -8 200 35 804 189 0 24 chr17 34712807 34712976 -54791577 - FRAM SINE Alu -4 172 8 1864 147 177 11 chr17 34713373 34713740 -54790813 - MSTA LTR MaLR 0 428 1 300 303 10 40 chr17 34714090 34714189 -54790364 + L1MC4a LINE L1 5983 6078 -1730 383 186 0 47 chr17 34714212 34714298 -54790255 + MER20 DNA MER1_type 57 138 -81 695 141 8 16 chr17 34714314 34714435 -54790118 + AluJb SINE Alu 5 124 -188 614 340 53 5 chr17 34716479 34716688 -54787865 - MIR SINE MIR -17 245 27 958 147 35 56 chr17 34719681 34719878 -54784675 + MLT1C LTR MaLR 1 193 -274 1469 158 0 24 chr17 34719891 34720144 -54784409 + AluJo SINE Alu 52 298 -14 910 188 0 0 chr17 34720148 34720308 -54784245 + AluJb SINE Alu 138 297 -15 1753 94 4 0 chr17 34720317 34720552 -54784001 + AluY SINE Alu 1 236 -75 782 209 34 28 chr17 34720552 34720729 -54783824 + MLT1C LTR MaLR 290 467 0 2298 72 0 20 chr17 34721318 34721622 -54782931 + AluY SINE Alu 1 298 -13 182 295 16 0 chr17 34721683 34721744 -54782809 - MIR3 SINE MIR -41 167 106 319 233 101 78 chr17 34721751 34721880 -54782673 - L2 LINE L2 -14 3299 3168 251 152 0 22 chr17 34722150 34722196 -54782357 - MLT1L LTR MaLR -363 252 208 1139 162 35 5 chr17 34722232 34722430 -54782123 + MER20 DNA MER1_type 16 219 0 291 317 97 14 chr17 34722431 34722576 -54781977 - MLT1L LTR MaLR -417 198 42 590 185 140 13 chr17 34722724 34722881 -54781672 - MER69 DNA AcHobo 0 2526 2350 212 274 0 48 chr17 34723684 34723746 -54780807 + MIR SINE MIR 118 176 -86 696 301 42 36 chr17 34723820 34724237 -54780316 + L2 LINE L2 2852 3269 -3 465 225 0 0 chr17 34724701 34724790 -54779763 + MIR SINE MIR 61 149 -59 351 0 0 0 chr17 34725208 34725247 -54779306 + (TG)n Simple_repeat Simple_repeat 1 39 0 4125 130 15 21 chr17 34725372 34726035 -54778518 - Tigger1 DNA MER2_type -355 2063 1405 * 6641 179 41 25 chr17 34726021 34726248 -54778305 - Tigger1 DNA MER2_type -1228 1190 968 1483 180 169 21 chr17 34726248 34726621 -54777932 - MSTA LTR MaLR 0 428 1 6641 179 41 25 chr17 34726621 34727556 -54776997 - Tigger1 DNA MER2_type -1450 968 9 1883 129 7 0 chr17 34727562 34727841 -54776712 + AluJb SINE Alu 4 284 -28 22 35 0 0 chr17 34727841 34727870 -54776683 + AT_rich Low_complexity Low_complexity 1 29 0 395 203 32 98 chr17 34728260 34728383 -54776170 - MIR SINE MIR 0 262 148 337 283 19 36 chr17 34728476 34728633 -54775920 - MIR3 SINE MIR -63 145 1 466 300 69 6 chr17 34728761 34728921 -54775632 + MIR SINE MIR 72 241 -21 2119 98 0 3 chr17 34729238 34729533 -54775020 + AluSc SINE Alu 1 294 -15 210 389 8 24 chr17 34729534 34729660 -54774893 + MER5A DNA MER1_type 65 188 -1 277 256 94 34 chr17 34729774 34729891 -54774662 - L3 LINE CR1 -3 1574 1451 * 454 236 47 0 chr17 34729881 34729987 -54774566 + MIR3 SINE MIR 91 201 -7 350 393 7 0 chr17 34730434 34730579 -54773974 - MIR SINE MIR -25 237 92 205 267 0 0 chr17 34732137 34732182 -54772371 + (TG)n Simple_repeat Simple_repeat 2 46 0 213 121 0 0 chr17 34734032 34734065 -54770488 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 337 253 35 0 chr17 34734699 34734786 -54769767 - MIR SINE MIR -19 243 154 1519 197 59 51 chr17 34734803 34735178 -54769375 + MLT1D LTR MaLR 1 378 -127 249 33 0 0 chr17 34735215 34735245 -54769308 + (A)n Simple_repeat Simple_repeat 1 30 0 632 224 0 7 chr17 34735741 34735884 -54768669 + MLT1D LTR MaLR 364 505 0 254 356 0 5 chr17 34735900 34735993 -54768560 - MIR SINE MIR -116 92 2 202 182 0 0 chr17 34736186 34736219 -54768334 + polypyrimidine Low_complexity Low_complexity 1 33 0 1116 117 21 16 chr17 34736481 34736669 -54767884 + MER53 DNA DNA 1 189 0 216 264 165 58 chr17 34737267 34737388 -54767165 - L2 LINE L2 -2 3311 3178 1469 227 85 56 chr17 34737630 34737861 -54766692 - MLT1F LTR MaLR -2 540 317 2791 3 0 0 chr17 34737861 34738169 -54766384 - AluYa5 SINE Alu -3 308 1 1469 227 85 56 chr17 34738169 34738453 -54766100 - MLT1F LTR MaLR -225 317 10 1547 197 61 83 chr17 34738454 34738926 -54765627 - MLT1C LTR MaLR 0 467 6 679 262 42 23 chr17 34739481 34739788 -54764765 + L1ME3 LINE L1 5650 5956 -206 1061 140 0 29 chr17 34740035 34740206 -54764347 - FRAM SINE Alu 0 166 1 1490 213 3 14 chr17 34740210 34740526 -54764027 - AluJo SINE Alu 0 313 1 569 317 90 50 chr17 34741133 34741632 -54762921 + L2 LINE L2 2377 2895 -419 233 250 19 0 chr17 34741800 34741852 -54762701 + L2 LINE L2 3006 3058 -255 193 308 243 9 chr17 34742043 34742150 -54762403 + L2 LINE L2 3136 3267 -5 345 274 59 39 chr17 34742970 34743123 -54761430 + MIR SINE MIR 107 262 0 1146 164 35 21 chr17 34743252 34743525 -54761028 + MER2 DNA MER2_type 1 315 -30 269 313 30 10 chr17 34744638 34744737 -54759816 - MER91B DNA MER1_type 0 190 90 412 252 84 8 chr17 34744755 34744874 -54759679 - MER91B DNA MER1_type -61 129 2 1207 213 21 21 chr17 34745114 34745401 -54759152 - AluJo SINE Alu -22 290 4 275 302 0 0 chr17 34746132 34746195 -54758358 + MIR SINE MIR 84 146 -62 225 169 0 0 chr17 34746459 34746518 -54758035 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 692 245 25 92 chr17 34746569 34746851 -54757702 + MLT1I LTR MaLR 93 355 -54 364 153 17 0 chr17 34746849 34746908 -54757645 - AluSp SINE Alu -106 197 138 * 819 311 42 0 chr17 34746908 34747149 -54757404 - L2 LINE L2 -230 3083 2833 1429 245 56 80 chr17 34747151 34747269 -54757284 + L1ME3 LINE L1 5173 5292 -870 2538 103 19 8 chr17 34747269 34747629 -54756924 + THE1B LTR MaLR 1 364 0 1429 245 56 80 chr17 34747629 34747707 -54756846 + L1ME3 LINE L1 5292 5370 -792 1353 178 39 45 chr17 34747707 34748016 -54756537 + AluJo SINE Alu 1 307 -5 1429 245 56 80 chr17 34748016 34748560 -54755993 + L1ME3 LINE L1 5370 5901 -261 1886 164 0 0 chr17 34748560 34748853 -54755700 - AluSx SINE Alu -19 293 1 1429 245 56 80 chr17 34748853 34749108 -54755445 + L1ME3 LINE L1 5901 6161 -1 564 295 115 42 chr17 34749148 34749179 -54755374 - L2 LINE L2 -499 2815 2788 2410 115 28 33 chr17 34749179 34749543 -54755010 + THE1B LTR MaLR 1 362 -2 564 295 115 42 chr17 34749543 34750016 -54754537 - L2 LINE L2 -526 2788 2274 258 81 0 0 chr17 34750054 34750091 -54754462 + (CA)n Simple_repeat Simple_repeat 2 38 0 312 285 91 42 chr17 34751356 34751623 -54752930 + MLT1F1 LTR MaLR 201 517 -50 2224 148 89 8 chr17 34752643 34753036 -54751517 + MSTA LTR MaLR 1 425 -3 2392 165 24 21 chr17 34754222 34754647 -54749906 - MSTB LTR MaLR 0 426 1 580 303 41 5 chr17 34754746 34754941 -54749612 + MIR SINE MIR 25 226 -36 183 346 13 0 chr17 34754984 34755062 -54749491 - MIR SINE MIR -108 154 76 24 0 0 0 chr17 34755192 34755216 -54749337 + AT_rich Low_complexity Low_complexity 1 24 0 180 179 0 0 chr17 34756244 34756283 -54748270 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 763 284 28 0 chr17 34757226 34757444 -54747109 + L1MC/D LINE L1 5574 5797 -2011 2061 125 0 4 chr17 34757548 34757829 -54746724 - AluSq SINE Alu -33 280 1 27 49 0 0 chr17 34757972 34758013 -54746540 + AT_rich Low_complexity Low_complexity 1 41 0 495 243 28 0 chr17 34758257 34758364 -54746189 - MER81 DNA DNA -3 111 2 206 267 186 0 chr17 34758481 34758567 -54745986 + MIR SINE MIR 63 164 -98 720 302 200 8 chr17 34758590 34759080 -54745473 + L2 LINE L2 975 1558 -1756 1688 179 47 47 chr17 34759449 34759830 -54744723 + MLT1B LTR MaLR 10 390 0 626 328 139 17 chr17 34759830 34760232 -54744321 + L2 LINE L2 2863 3313 0 226 318 210 9 chr17 34760521 34760754 -54743799 - L3 LINE CR1 -23 1554 1275 213 121 0 0 chr17 34760820 34760853 -54743700 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 186 156 0 0 chr17 34761000 34761032 -54743521 + L2 LINE L2 3282 3313 0 455 270 24 41 chr17 34761788 34761814 -54742739 - L1MA2 LINE L1 -302 5819 5794 370 237 11 0 chr17 34761814 34761907 -54742646 - L1MA10 LINE L1 -1 6333 6240 455 270 24 41 chr17 34761907 34762148 -54742405 - L1MA2 LINE L1 -327 5794 5589 372 281 48 14 chr17 34762444 34762590 -54741963 + MIR SINE MIR 100 250 -12 200 233 17 0 chr17 34762838 34762898 -54741655 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 228 362 184 7 chr17 34763071 34763212 -54741341 - L3 LINE CR1 -37 1540 1375 694 246 58 8 chr17 34763353 34763593 -54740960 + LTR16C LTR ERVL 223 474 -17 293 275 37 22 chr17 34764206 34764311 -54740242 + MIR SINE MIR 5 111 -106 920 107 0 37 chr17 34764687 34764874 -54739679 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 296 96 39 0 chr17 34764875 34764927 -54739626 + GA-rich Low_complexity Low_complexity 3 56 0 2520 113 16 11 chr17 34765307 34765680 -54738873 - THE1C LTR MaLR 0 375 1 1618 185 47 22 chr17 34768163 34768482 -54736071 + L1M4b LINE L1 2 328 -6531 1405 204 50 62 chr17 34768486 34768907 -54735646 + MLT2C2 LTR ERVL 1 416 -48 4208 212 160 12 chr17 34768907 34770142 -54734411 + L1M4b LINE L1 430 1834 -5021 432 231 9 46 chr17 34770145 34770253 -54734300 + L1M4b LINE L1 156 259 -6600 337 197 0 56 chr17 34770253 34770324 -54734229 - MLT2D LTR ERVL -119 295 229 323 253 46 0 chr17 34770305 34770392 -54734161 - MLT2D LTR ERVL -118 296 206 * 1732 249 28 34 chr17 34770393 34771128 -54733425 + L1M4b LINE L1 1859 2723 -4415 233 281 98 0 chr17 34771312 34771394 -54733159 + L1MC4 LINE L1 6614 6703 -1339 228 227 0 82 chr17 34771403 34771513 -54733040 + L1MC4 LINE L1 6603 6703 -1339 360 189 0 0 chr17 34771518 34771592 -54732961 + (TA)n Simple_repeat Simple_repeat 1 74 0 1577 238 88 8 chr17 34771604 34772084 -54732469 + L1M4b LINE L1 3264 3781 -3176 1976 150 10 0 chr17 34772282 34772582 -54731971 - AluJb SINE Alu -9 303 1 205 272 37 56 chr17 34772728 34772853 -54731700 - MIR SINE MIR -87 121 35 465 317 47 29 chr17 34773042 34773212 -54731341 - MIR SINE MIR -65 143 6 228 226 87 70 chr17 34775264 34775379 -54729174 + MIR SINE MIR 36 152 -56 182 297 110 22 chr17 34776499 34776590 -54727963 - MIR3 SINE MIR -28 180 82 219 88 0 0 chr17 34776993 34777027 -54727526 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 182 279 105 12 chr17 34777112 34777198 -54727355 - L2 LINE L2 -56 3216 3123 27 29 0 0 chr17 34777269 34777303 -54727250 + AT_rich Low_complexity Low_complexity 1 34 0 4022 147 7 98 chr17 34777467 34778420 -54726133 + L1MC2 LINE L1 5189 6044 -300 1250 67 0 0 chr17 34778521 34778671 -54725882 + AluY SINE Alu 157 306 -5 1588 236 63 16 chr17 34778687 34779115 -54725438 + MLT1D LTR MaLR 58 505 0 1020 222 20 20 chr17 34780492 34780740 -54723813 - MLT1D LTR MaLR 0 505 258 550 159 0 23 chr17 34781033 34781121 -54723432 + AluS SINE Alu 6 91 -222 1600 248 72 39 chr17 34781320 34781859 -54722694 + Zaphod DNA AcHobo 38 558 -3473 198 103 0 0 chr17 34781859 34781888 -54722665 + (TG)n Simple_repeat Simple_repeat 2 30 0 1600 248 72 39 chr17 34781888 34782158 -54722395 + Zaphod DNA AcHobo 558 3509 -522 499 104 0 0 chr17 34782158 34782225 -54722328 + MSTC LTR MaLR 1 67 -361 362 258 80 54 chr17 34782384 34782589 -54721964 + MIR SINE MIR 40 250 -12 1924 134 0 42 chr17 34783249 34783555 -54720998 - AluJo SINE Alu -14 298 6 340 322 4 61 chr17 34783566 34783750 -54720803 - MIR SINE MIR -62 146 13 751 217 7 0 chr17 34783867 34784019 -54720534 + MER117 DNA MER1_type 1 153 -44 545 258 55 82 chr17 34784060 34784389 -54720164 - MLT1J LTR MaLR -191 320 1 349 310 99 0 chr17 34784780 34784922 -54719631 - MIR3 SINE MIR -20 188 33 193 191 21 32 chr17 34785176 34785270 -54719283 + (TG)n Simple_repeat Simple_repeat 1 93 0 2204 132 0 0 chr17 34785443 34785746 -54718807 + AluSx SINE Alu 1 303 -9 1756 178 53 12 chr17 34785750 34786087 -54718466 + MLT1A1 LTR MaLR 10 360 -5 367 93 0 0 chr17 34786095 34786149 -54718404 - MER53 DNA DNA -1 188 135 23 0 0 0 chr17 34786443 34786466 -54718087 + AT_rich Low_complexity Low_complexity 1 23 0 314 265 0 0 chr17 34788099 34788167 -54716386 + MARNA DNA Mariner 317 384 -202 246 307 50 36 chr17 34788243 34788383 -54716170 + MIR SINE MIR 56 197 -65 279 221 12 70 chr17 34788571 34788657 -54715896 + L2 LINE L2 3187 3267 -5 691 285 39 43 chr17 34789339 34789560 -54714993 - MIR SINE MIR -6 256 35 2130 135 0 0 chr17 34789560 34789863 -54714690 - AluSx SINE Alu -9 303 1 691 285 39 43 chr17 34789863 34789897 -54714656 - MIR SINE MIR -227 35 2 382 306 0 9 chr17 34790442 34790550 -54714003 + MIR SINE MIR 46 152 -110 391 307 71 13 chr17 34791408 34791633 -54712920 + L2 LINE L2 2456 2693 -621 1192 246 45 5 chr17 34791636 34792014 -54712539 - L1M4 LINE L1 -872 5274 4882 1659 163 18 7 chr17 34792041 34792318 -54712235 + AluJb SINE Alu 1 280 -32 630 283 111 7 chr17 34792348 34792841 -54711712 + L2 LINE L2 2702 3244 -69 * 797 261 17 13 chr17 34792839 34793069 -54711484 + MIR SINE MIR 14 244 -18 250 246 184 18 chr17 34793347 34793461 -54711092 + MIR3 SINE MIR 48 180 -28 278 286 112 18 chr17 34793711 34793893 -54710660 + MIR SINE MIR 36 232 -30 217 338 0 15 chr17 34793909 34793977 -54710576 + MER5A DNA MER1_type 86 152 -37 1267 172 34 40 chr17 34794059 34794385 -54710168 - MER33 DNA MER1_type 0 324 1 444 250 61 75 chr17 34794569 34794583 -54709970 - MIR SINE MIR -51 211 198 2505 130 5 20 chr17 34794583 34794976 -54709577 + MLT1B LTR MaLR 1 387 -3 444 250 61 75 chr17 34794976 34795173 -54709380 - MIR SINE MIR -64 198 3 303 307 7 44 chr17 34795575 34795712 -54708841 - MIR SINE MIR -109 153 22 21 36 0 0 chr17 34796156 34796184 -54708369 + AT_rich Low_complexity Low_complexity 1 28 0 2540 134 51 5 chr17 34797342 34797520 -54707033 + MSTA LTR MaLR 1 169 -259 6410 75 13 8 chr17 34797520 34798638 -54705915 + L1PA8A LINE L1 5008 6130 -1 2540 134 51 5 chr17 34798638 34798868 -54705685 + MSTA LTR MaLR 169 428 0 260 308 131 8 chr17 34798895 34799025 -54705528 - MIR SINE MIR 0 262 117 351 0 0 0 chr17 34799057 34799096 -54705457 + (CA)n Simple_repeat Simple_repeat 1 39 0 3604 244 74 11 chr17 34799119 34800154 -54704399 + MER69B DNA AcHobo 43 1143 -83 252 215 89 63 chr17 34800201 34800280 -54704273 + MLT2C1 LTR ERVL 277 357 -40 282 91 0 23 chr17 34800326 34800370 -54704183 + MLT2F LTR ERVL 619 661 -2 496 307 96 9 chr17 34800415 34800633 -54703920 - MIR SINE MIR -11 251 15 232 240 40 30 chr17 34800846 34800946 -54703607 - MIR3 SINE MIR -4 204 104 211 229 0 0 chr17 34801291 34801339 -54703214 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1922 156 3 7 chr17 34801394 34801701 -54702852 - AluJo SINE Alu -6 306 1 286 291 86 6 chr17 34801732 34801877 -54702676 - MIR SINE MIR -63 145 2 225 320 149 11 chr17 34802410 34802585 -54701968 + MIR SINE MIR 21 219 -43 195 276 26 26 chr17 34802875 34802951 -54701602 - MIR SINE MIR -34 228 153 238 305 59 34 chr17 34803149 34803267 -54701286 - MIR SINE MIR -110 152 32 373 295 114 20 chr17 34804429 34804578 -54699975 + MIR3 SINE MIR 3 165 -43 622 318 70 16 chr17 34804839 34805097 -54699456 + LTR16A LTR ERVL 170 441 -9 232 362 55 12 chr17 34805849 34806038 -54698515 + MIR3 SINE MIR 5 202 -60 295 350 10 0 chr17 34806393 34806493 -54698060 + MIR SINE MIR 31 131 -77 209 347 42 11 chr17 34806648 34806743 -54697810 + L2 LINE L2 3198 3295 -18 338 355 51 10 chr17 34806770 34806967 -54697586 - L2 LINE L2 -219 3053 2849 366 186 9 18 chr17 34808802 34808915 -54695638 + CT-rich Low_complexity Low_complexity 1 112 0 1368 23 11 6 chr17 34808948 34809125 -54695428 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 508 241 36 0 chr17 34809348 34809460 -54695093 + MER91C DNA MER1_type 5 120 -20 180 250 0 54 chr17 34809934 34809990 -54694563 - MIR SINE MIR -191 71 19 207 261 31 0 chr17 34810172 34810237 -54694316 + MER5A DNA MER1_type 50 116 -73 457 273 171 11 chr17 34810366 34810553 -54694000 - MIR SINE MIR -43 219 3 459 281 83 23 chr17 34811074 34811285 -54693268 + MIR SINE MIR 36 253 -9 645 190 82 92 chr17 34811316 34811500 -54693053 - MER3 DNA MER1_type -6 203 22 579 214 0 0 chr17 34811634 34811732 -54692821 + Tigger3(Golem) DNA MER2_type 2931 3028 -1 231 36 0 0 chr17 34812890 34812918 -54691635 + (T)n Simple_repeat Simple_repeat 1 28 0 1118 133 35 71 chr17 34864630 34864856 -54639697 + MER20 DNA MER1_type 1 218 -1 314 237 0 0 chr17 34865842 34865918 -54638635 + MIR SINE MIR 47 122 -140 285 310 30 0 chr17 34866185 34866285 -54638268 + MER3 DNA MER1_type 52 154 -55 286 171 13 40 chr17 34866307 34866383 -54638170 + MER3 DNA MER1_type 2237 2310 0 660 179 22 71 chr17 34867380 34867564 -54636989 + MER5B DNA MER1_type 4 178 0 313 262 35 90 chr17 34867624 34867769 -54636784 - MIR SINE MIR -68 194 58 321 118 0 0 chr17 34867929 34867980 -54636573 + (CA)n Simple_repeat Simple_repeat 1 51 0 253 263 63 11 chr17 34868605 34868700 -54635853 - MER117 DNA MER1_type -26 171 72 379 287 35 17 chr17 34868774 34868889 -54635664 - MIR SINE MIR -116 146 30 186 287 47 93 chr17 34868956 34869106 -54635447 + L2 LINE L2 2973 3115 -157 239 0 32 0 chr17 34870468 34870499 -54634054 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2545 62 3 0 chr17 34870530 34870839 -54633714 - AluY SINE Alu -1 310 1 508 168 10 10 chr17 34872857 34872958 -54631595 - MIR3 SINE MIR -7 201 101 185 287 108 32 chr17 34873161 34873318 -54631235 - L2 LINE L2 -172 3100 2932 222 91 0 0 chr17 34873443 34873476 -54631077 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 360 261 194 0 chr17 34873511 34873645 -54630908 - MIR SINE MIR -57 205 46 431 230 115 0 chr17 34874158 34874297 -54630256 - MER5B DNA MER1_type -17 161 7 1093 253 97 102 chr17 34874744 34875342 -54629211 - MLT1G1 LTR MaLR 0 595 1 425 265 108 16 chr17 34875441 34875604 -54628949 - MIR SINE MIR -49 213 30 1112 132 35 75 chr17 34875604 34875831 -54628722 + MER20 DNA MER1_type 1 218 -1 425 265 108 16 chr17 34875831 34875852 -54628701 - MIR SINE MIR -232 30 12 314 237 0 0 chr17 34876817 34876893 -54627660 + MIR SINE MIR 47 122 -140 559 244 0 8 chr17 34877160 34877283 -54627270 + MER3 DNA MER1_type 52 126 -83 1270 154 48 74 chr17 34877284 34877596 -54626957 + MER3 DNA MER1_type 2237 2540 0 26 82 0 0 chr17 34877748 34877809 -54626744 + AT_rich Low_complexity Low_complexity 1 61 0 658 218 0 16 chr17 34877820 34877944 -54626609 - FLAM_A SINE Alu -11 122 1 401 247 0 11 chr17 34877944 34878037 -54626516 + MER3 DNA MER1_type 2494 2585 0 307 279 49 16 chr17 34879109 34879231 -54625322 + MIR SINE MIR 51 176 -86 233 297 0 0 chr17 34880128 34880192 -54624361 + MIR SINE MIR 38 101 -107 253 289 9 61 chr17 34880285 34880399 -54624154 - MIR SINE MIR -152 110 3 45 55 0 0 chr17 34881494 34881567 -54622986 + AT_rich Low_complexity Low_complexity 1 73 0 469 282 24 53 chr17 34881578 34881713 -54622840 + MIR SINE MIR 4 132 -130 2227 89 120 3 chr17 34881713 34882039 -54622514 + THE1B LTR MaLR 1 364 0 469 282 24 53 chr17 34882039 34882109 -54622444 + MIR SINE MIR 132 203 -59 378 266 139 6 chr17 34883604 34883762 -54620791 - MIR3 SINE MIR -13 195 17 197 292 15 0 chr17 34884208 34884273 -54620280 + MIR SINE MIR 89 154 -108 2208 95 0 42 chr17 34884441 34884747 -54619806 - AluY SINE Alu -18 293 1 3920 75 6 0 chr17 34884813 34885323 -54619230 - L1PA8 LINE L1 -2 6170 5658 194 337 22 0 chr17 34886005 34886097 -54618456 + MIR SINE MIR 157 250 -12 1991 120 42 0 chr17 34886678 34886962 -54617591 - AluSg SINE Alu -10 300 5 23 68 0 0 chr17 34887012 34887056 -54617497 + AT_rich Low_complexity Low_complexity 1 44 0 300 266 43 106 chr17 34887066 34887254 -54617299 - L3 LINE CR1 -57 1520 1345 1814 102 0 0 chr17 34887658 34887903 -54616650 - L1PA8 LINE L1 -8 6164 5920 2210 113 10 3 chr17 34887933 34888242 -54616311 + AluSx SINE Alu 2 312 0 238 227 11 80 chr17 34889804 34889892 -54614661 + L1MB8 LINE L1 5594 5675 -489 294 261 25 56 chr17 34889990 34890151 -54614402 + L1MB8 LINE L1 5729 5884 -294 293 390 16 0 chr17 34890321 34890444 -54614109 + L2 LINE L2 3144 3268 -4 378 151 0 0 chr17 34890597 34890670 -54613883 + (TG)n Simple_repeat Simple_repeat 2 74 0 1581 193 9 25 chr17 34890880 34891196 -54613357 + AluJb SINE Alu 1 311 -1 306 303 110 18 chr17 34892087 34892196 -54612357 - L2 LINE L2 0 3313 3195 264 274 10 49 chr17 34892251 34892353 -54612200 + MIR SINE MIR 7 104 -158 292 294 34 42 chr17 34892673 34892792 -54611761 - MIR SINE MIR -143 119 2 831 151 16 0 chr17 34892925 34893051 -54611502 - AluJb SINE Alu -182 130 3 25 0 0 0 chr17 34893063 34893088 -54611465 + AT_rich Low_complexity Low_complexity 1 25 0 236 218 26 26 chr17 34893118 34893196 -54611357 + (TA)n Simple_repeat Simple_repeat 1 78 0 1553 140 33 8 chr17 34893222 34893465 -54611088 - AluSx SINE Alu -9 303 55 815 156 0 0 chr17 34893465 34893587 -54610966 - AluJb SINE Alu -190 122 1 292 200 17 0 chr17 34893587 34893647 -54610906 - MIR SINE MIR -76 186 126 325 206 0 0 chr17 34893747 34893810 -54610743 - MIR SINE MIR -99 163 101 2179 123 0 3 chr17 34893816 34894109 -54610444 + AluSg SINE Alu 1 292 -18 558 242 55 6 chr17 34895969 34896134 -54608419 + MER5B DNA MER1_type 1 173 -5 548 188 0 0 chr17 34896199 34896295 -54608258 - MER5A DNA MER1_type -84 105 10 607 165 43 0 chr17 34896696 34896810 -54607743 + LTR50 LTR ERVL 1 119 -676 325 264 23 11 chr17 34896810 34896897 -54607656 - MER81 DNA DNA 0 114 27 276 202 140 53 chr17 34896906 34897020 -54607533 + LTR50 LTR ERVL 109 232 -563 180 0 0 0 chr17 34897040 34897060 -54607493 + (CAG)n Simple_repeat Simple_repeat 1 20 0 461 267 157 13 chr17 34897143 34897379 -54607174 + LTR50 LTR ERVL 526 795 0 211 369 70 0 chr17 34897523 34897680 -54606873 - L2 LINE L2 -180 3092 2925 248 0 31 0 chr17 34898038 34898070 -54606483 + (CA)n Simple_repeat Simple_repeat 2 34 0 338 300 0 0 chr17 34898346 34898416 -54606137 + MER81 DNA DNA 1 70 -44 958 156 0 7 chr17 34899019 34899173 -54605380 - LTR32 LTR ERVL -2 469 317 254 108 0 0 chr17 34899315 34899352 -54605201 - LTR32 LTR ERVL -119 352 316 1701 185 44 47 chr17 34899354 34899695 -54604858 - LTR32 LTR ERVL -122 349 10 571 306 128 29 chr17 34899695 34900281 -54604272 + L3 LINE CR1 822 1465 -112 625 251 56 20 chr17 34900335 34900530 -54604023 + L2 LINE L2 3102 3303 -10 35 54 0 0 chr17 34901463 34901519 -54603034 + AT_rich Low_complexity Low_complexity 1 56 0 547 320 29 37 chr17 34902039 34902283 -54602270 - MIR SINE MIR -7 255 14 290 309 143 6 chr17 34902711 34902879 -54601674 + MIR SINE MIR 1 191 -71 1093 32 0 0 chr17 34903970 34904095 -54600458 - AluY SINE Alu -14 297 173 226 264 75 57 chr17 34904428 34904534 -54600019 + MIR SINE MIR 41 148 -60 245 299 117 15 chr17 34906101 34906238 -54598315 - MIR SINE MIR -49 213 63 577 302 19 15 chr17 34906566 34906771 -54597782 - MIR SINE MIR -51 211 6 401 308 89 14 chr17 34906981 34907195 -54597358 - L2 LINE L2 -482 2832 2603 186 43 0 0 chr17 34907537 34907560 -54596993 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 899 162 132 25 chr17 34908853 34909050 -54595503 - MER20 DNA MER1_type -1 218 1 191 191 71 0 chr17 34910615 34910657 -54593896 - MIR SINE MIR -32 230 186 200 392 108 0 chr17 34910943 34911045 -54593508 + L2 LINE L2 3158 3270 -2 240 320 72 10 chr17 34911075 34911172 -54593381 + MIR SINE MIR 38 140 -68 335 305 80 13 chr17 34912581 34912732 -54591821 + MIR SINE MIR 49 209 -53 345 131 0 0 chr17 34912864 34912925 -54591628 + (ATG)n Simple_repeat Simple_repeat 1 61 0 200 138 0 62 chr17 34913229 34913294 -54591259 + (GGAGAA)n Simple_repeat Simple_repeat 5 65 0 578 277 134 9 chr17 34913361 34913592 -54590961 + MIR SINE MIR 1 260 -2 574 224 6 6 chr17 34913613 34913792 -54590761 + (TAG)n Simple_repeat Simple_repeat 2 180 0 212 349 24 0 chr17 34914819 34914902 -54589651 - MIR3 SINE MIR -34 174 90 182 364 0 0 chr17 34916129 34916206 -54588347 + MIR3 SINE MIR 115 191 -17 232 358 0 0 chr17 34916259 34916326 -54588227 - L2 LINE L2 0 3272 3206 213 311 0 0 chr17 34916597 34916658 -54587895 + GA-rich Low_complexity Low_complexity 1 61 0 1511 167 44 34 chr17 34916927 34917221 -54587332 - AluJo SINE Alu -10 302 6 344 291 182 0 chr17 34917302 34917467 -54587086 + MIR SINE MIR 56 250 -12 266 290 0 0 chr17 34918106 34918168 -54586385 - L2 LINE L2 -42 3230 3169 391 289 107 53 chr17 34918215 34918589 -54585964 + L1ME4a LINE L1 5538 5931 -190 198 171 0 0 chr17 34918697 34918732 -54585821 - MIR SINE MIR -111 151 117 565 103 82 0 chr17 34919649 34919746 -54584807 - L1MA5 LINE L1 0 6300 6196 1312 247 28 32 chr17 34920896 34921135 -54583418 - MER113 DNA MER1_type? -89 432 194 2162 124 3 13 chr17 34921135 34921450 -54583103 - AluSp SINE Alu -1 312 1 1312 247 28 32 chr17 34921450 34921643 -54582910 - MER113 DNA MER1_type? -327 194 2 1235 21 0 0 chr17 34922863 34923005 -54581548 + L1HS LINE L1 6014 6155 0 1064 249 81 42 chr17 34923075 34923508 -54581045 - L1ME3A LINE L1 -95 6075 5626 477 228 84 71 chr17 34923552 34923810 -54580743 - L1ME LINE L1 -306 5860 5596 297 258 60 34 chr17 34924602 34924774 -54579779 - MIR SINE MIR -59 149 9 339 25 0 0 chr17 34925421 34925461 -54579092 + (TG)n Simple_repeat Simple_repeat 1 40 0 797 236 6 0 chr17 34925461 34925618 -54578935 - MER58A DNA MER1_type -25 199 42 4293 183 38 22 chr17 34925619 34926022 -54578531 + L1MB8 LINE L1 4918 5313 -865 1830 167 0 3 chr17 34926022 34926309 -54578244 + AluJo SINE Alu 1 286 -26 186 43 0 0 chr17 34926312 34926335 -54578218 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4293 183 38 22 chr17 34926335 34927161 -54577392 + L1MB8 LINE L1 5314 6173 -5 282 207 0 35 chr17 34927174 34927232 -54577321 - MER58A DNA MER1_type -168 56 1 183 387 54 9 chr17 34927242 34927353 -54577200 - L2 LINE L2 -40 3232 3117 234 0 0 0 chr17 34927466 34927492 -54577061 + (T)n Simple_repeat Simple_repeat 1 26 0 187 338 0 13 chr17 34927508 34927585 -54576968 - L2 LINE L2 -614 2700 2625 23 0 0 0 chr17 34927617 34927640 -54576913 + AT_rich Low_complexity Low_complexity 1 23 0 340 287 61 0 chr17 34927989 34928104 -54576449 + MIR SINE MIR 125 246 -16 248 296 17 43 chr17 34929637 34929752 -54574801 - L2 LINE L2 0 3272 3161 3193 159 7 25 chr17 34929752 34930349 -54574204 + LTR60 LTR ERV1 1 586 0 470 214 9 56 chr17 34930733 34930916 -54573637 + MIR SINE MIR 38 210 -52 1013 136 38 16 chr17 34931820 34932004 -54572549 - MER53 DNA DNA 0 189 2 219 235 20 0 chr17 34932699 34932750 -54571803 + L2 LINE L2 3261 3312 -1 25 0 0 0 chr17 34933523 34933548 -54571005 + AT_rich Low_complexity Low_complexity 1 25 0 296 298 90 56 chr17 34933567 34933745 -54570808 + MIR SINE MIR 8 191 -71 386 269 59 38 chr17 34934020 34934206 -54570347 - MIR SINE MIR -25 237 48 44174 46 6 1 chr17 34934654 34940768 -54563785 + L1PA4 LINE L1 1 6147 -8 198 0 0 0 chr17 34940787 34940809 -54563744 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 516 217 47 23 chr17 34941415 34941544 -54563009 - MIR SINE MIR -126 136 5 476 254 103 63 chr17 34941609 34941977 -54562576 + LTR33 LTR ERVL 38 456 -65 387 263 17 0 chr17 34942796 34942914 -54561639 + MIR SINE MIR 132 251 -11 268 335 65 27 chr17 34943002 34943187 -54561366 - MIR SINE MIR -51 211 20 191 381 0 0 chr17 34943236 34943299 -54561254 + L2 LINE L2 3000 3062 -210 211 350 32 32 chr17 34943419 34943542 -54561011 + L2 LINE L2 3133 3255 -17 425 252 66 64 chr17 34943553 34943865 -54560688 - MLT1I LTR MaLR -2 407 59 183 80 0 0 chr17 34944025 34944050 -54560503 + (CA)n Simple_repeat Simple_repeat 2 26 0 374 294 216 0 chr17 34944281 34944434 -54560119 + MER5A DNA MER1_type 4 189 0 257 292 101 77 chr17 34944741 34945077 -54559476 - L2 LINE L2 -12 3260 2917 259 189 38 0 chr17 34945368 34945421 -54559132 + Tigger5 DNA MER2_type 1 55 -2268 454 211 0 22 chr17 34945482 34945572 -54558981 - Tigger5 DNA MER2_type -2235 88 1 516 165 0 12 chr17 34945585 34945670 -54558883 + Tigger5 DNA MER2_type 2239 2322 -1 285 267 0 50 chr17 34945709 34945810 -54558743 - L2 LINE L2 -181 3091 2996 545 216 0 16 chr17 34946690 34946815 -54557738 - MIR3 SINE MIR 0 208 86 186 298 83 24 chr17 34947318 34947402 -54557151 - L2 LINE L2 -39 3233 3145 888 209 30 0 chr17 34947562 34947763 -54556790 - MER3 DNA MER1_type -1 208 2 253 319 174 0 chr17 34947943 34948150 -54556403 - MIR SINE MIR -6 256 14 851 305 53 30 chr17 34949567 34949960 -54554593 - L2 LINE L2 -16 3297 2896 400 252 106 8 chr17 34950834 34950957 -54553596 + MIR SINE MIR 12 146 -116 469 340 16 10 chr17 34950969 34951163 -54553390 + MER117 DNA MER1_type 1 195 -2 387 105 0 0 chr17 34951846 34951903 -54552650 + (TG)n Simple_repeat Simple_repeat 2 58 0 445 271 57 29 chr17 34952047 34952187 -54552366 + MIR SINE MIR 13 156 -106 206 339 21 23 chr17 34952527 34952622 -54551931 + MIR SINE MIR 27 122 -86 1852 133 0 0 chr17 34952673 34952943 -54551610 - AluSx SINE Alu -4 308 39 690 265 14 39 chr17 34953331 34953548 -54551005 + MIR SINE MIR 3 212 -50 285 344 49 8 chr17 34954898 34955020 -54549533 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 34955161 34955271 -54549282 - MARNA DNA Mariner -92 494 391 1429 231 53 11 chr17 34955670 34955739 -54548814 - L1MD3 LINE L1 -11 7984 7919 2153 106 0 3 chr17 34955739 34956040 -54548513 - AluY SINE Alu -11 300 1 1429 231 53 11 chr17 34956040 34956330 -54548223 - L1MD3 LINE L1 -76 7919 7610 703 47 0 0 chr17 34956565 34956650 -54547903 + AluY SINE Alu 215 299 -12 279 309 0 0 chr17 34956650 34956731 -54547822 + MARNA DNA Mariner 397 477 -109 396 175 25 12 chr17 34956867 34956947 -54547606 - L1MD3 LINE L1 -278 7717 7637 300 266 0 0 chr17 34957380 34957444 -54547109 + MER91 DNA MER1_type 77 140 0 209 323 111 10 chr17 34959012 34959111 -54545442 - L2 LINE L2 -26 3246 3138 198 395 0 0 chr17 34959148 34959224 -54545329 + MIR3 SINE MIR 133 208 0 372 270 95 0 chr17 34959698 34959835 -54544718 + LTR67 LTR ERVL 401 550 -7 541 183 98 46 chr17 34960950 34961103 -54543450 - MER103 DNA DNA -2 164 4 2425 77 3 0 chr17 34961389 34961701 -54542852 + AluSp SINE Alu 1 313 0 549 263 160 0 chr17 34961741 34961897 -54542656 + MER5A DNA MER1_type 9 189 0 480 303 67 0 chr17 34961907 34962072 -54542481 - MER5B DNA MER1_type -2 176 1 216 0 0 0 chr17 34962652 34962676 -54541877 + (T)n Simple_repeat Simple_repeat 1 24 0 250 290 0 16 chr17 34962739 34962801 -54541752 - MIR SINE MIR -182 80 20 1298 149 73 120 chr17 34963320 34963636 -54540917 - AluJb SINE Alu -1 301 1 222 279 0 39 chr17 34965906 34966010 -54538543 + GA-rich Low_complexity Low_complexity 2 101 0 189 383 21 0 chr17 34966292 34966386 -54538167 + L2 LINE L2 3208 3303 -10 1019 293 0 0 chr17 34967400 34967632 -54536921 + MIR SINE MIR 29 260 -2 399 232 320 31 chr17 34967752 34967946 -54536607 - MIR SINE MIR 0 262 13 707 344 59 11 chr17 34967960 34968230 -54536323 + L2 LINE L2 3025 3307 -6 184 234 52 13 chr17 34968326 34968403 -54536150 - L2 LINE L2 -252 3061 2982 423 295 68 14 chr17 34968754 34968961 -54535592 - MLT1J LTR MaLR -1 510 293 433 274 19 9 chr17 34969032 34969138 -54535415 - MLT1J LTR MaLR -332 179 73 2160 102 13 0 chr17 34969368 34969671 -54534882 + AluSp SINE Alu 1 307 -6 1658 132 49 3 chr17 34969721 34970030 -54534523 + AluSx SINE Alu 1 312 0 2192 73 7 0 chr17 34970207 34970494 -54534059 + AluSp SINE Alu 1 289 -24 194 0 0 37 chr17 34970504 34970531 -54534022 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 328 310 30 0 chr17 34970680 34970780 -54533773 + MIR SINE MIR 160 262 0 461 276 52 8 chr17 34971335 34971469 -54533084 - MIR SINE MIR -13 249 110 407 274 0 19 chr17 34972136 34972242 -54532311 - MIR SINE MIR -127 135 32 202 287 135 54 chr17 34972875 34973209 -54531344 + L2 LINE L2 1556 1916 -1398 685 278 128 62 chr17 34973717 34974091 -54530462 + MLT1K LTR MaLR 190 588 0 275 297 118 17 chr17 34974271 34974405 -54530148 + MIR SINE MIR 1 146 -62 319 191 0 59 chr17 34975225 34975293 -54529260 - L2 LINE L2 -8 3264 3201 384 119 0 0 chr17 34975366 34975425 -54529128 + (CA)n Simple_repeat Simple_repeat 2 60 0 231 167 0 0 chr17 34975456 34975498 -54529055 + (CA)n Simple_repeat Simple_repeat 1 42 0 208 360 22 7 chr17 34975608 34975744 -54528809 + L2 LINE L2 2918 3055 -217 180 300 0 0 chr17 34975877 34975917 -54528636 + L2 LINE L2 3186 3225 -47 5982 94 16 51 chr17 34976845 34978231 -54526322 + L1PA16 LINE L1 4809 6157 -9 328 320 0 0 chr17 34978469 34978572 -54525981 + MIR SINE MIR 155 257 -5 626 284 92 5 chr17 34978658 34978876 -54525677 + MIR SINE MIR 8 244 -18 222 284 40 0 chr17 34979560 34979634 -54524919 - MIR3 SINE MIR -53 155 79 237 344 11 11 chr17 34979694 34979787 -54524766 + MIR SINE MIR 54 146 -116 336 102 0 0 chr17 34979788 34979837 -54524716 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 225 358 11 11 chr17 34979849 34979944 -54524609 - MER81 DNA DNA 0 114 20 344 270 0 0 chr17 34979972 34980046 -54524507 - L2 LINE L2 -50 3263 3190 340 319 96 31 chr17 34980090 34980319 -54524234 - MIR SINE MIR -3 259 16 293 244 232 0 chr17 34980887 34980969 -54523584 - MIR3 SINE MIR -26 182 82 313 241 58 138 chr17 34981430 34981680 -54522873 + MIR SINE MIR 2 250 -12 314 227 100 57 chr17 34982625 34982784 -54521769 + MIR3 SINE MIR 8 183 -55 336 247 37 0 chr17 34983720 34983801 -54520752 - MIR SINE MIR -26 236 153 3342 124 4 17 chr17 34983801 34984318 -54520235 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 937 152 0 33 chr17 34984346 34984442 -54520111 - Tigger4(Zombi) DNA MER2_type -2585 146 55 1974 128 0 7 chr17 34984442 34984738 -54519815 - AluSx SINE Alu -18 294 1 937 152 0 33 chr17 34984738 34984792 -54519761 - Tigger4(Zombi) DNA MER2_type -2676 55 1 1528 247 8 22 chr17 34984804 34985172 -54519381 + MLT1A1 LTR MaLR 3 365 0 461 225 36 9 chr17 34985172 34985283 -54519270 - MIR SINE MIR -107 155 42 926 67 0 0 chr17 34988402 34988567 -54515986 - AluY SINE Alu 0 325 161 1936 171 90 43 chr17 34988596 34989063 -54515490 - LTR2B LTR ERV1 0 490 2 1509 161 41 32 chr17 34989719 34989931 -54514622 + MER33 DNA MER1_type 6 214 -2371 2129 109 3 31 chr17 34989931 34990251 -54514302 + AluSp SINE Alu 1 311 -2 189 0 0 0 chr17 34990251 34990272 -54514281 + (TA)n Simple_repeat Simple_repeat 2 22 0 1509 161 41 32 chr17 34990272 34990374 -54514179 + MER33 DNA MER1_type 213 324 0 673 231 230 48 chr17 34990463 34990944 -54513609 + L2 LINE L2 2714 3308 -5 389 290 24 96 chr17 34991287 34991621 -54512932 - L3 LINE CR1 -6 1571 1262 414 269 39 113 chr17 34991865 34992121 -54512432 - L2 LINE L2 -9 3263 3027 621 290 92 66 chr17 34992593 34992986 -54511567 + L2 LINE L2 2870 3272 0 465 313 60 37 chr17 34993080 34993297 -54511256 - MIR SINE MIR -33 229 8 587 247 13 13 chr17 34993466 34993616 -54510937 + MIR SINE MIR 61 210 -52 286 263 123 9 chr17 34994214 34994328 -54510225 + MIR3 SINE MIR 78 204 -4 236 285 133 35 chr17 34994323 34994468 -54510085 + MIR SINE MIR 82 249 -13 * 1954 123 11 0 chr17 34994623 34994908 -54509645 - AluSx SINE Alu -24 288 1 353 280 280 12 chr17 34994940 34995197 -54509356 - L1ME4a LINE L1 0 6121 5796 308 352 119 0 chr17 34995993 34996186 -54508367 - MIR SINE MIR 0 262 47 293 335 37 50 chr17 34996758 34996919 -54507634 - MIR3 SINE MIR -44 164 6 * 324 286 92 17 chr17 34996904 34997023 -54507530 - MIR3 SINE MIR -46 162 35 339 25 0 0 chr17 34998040 34998080 -54506473 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 338 282 129 52 chr17 34998104 34998352 -54506201 - L2 LINE L2 -46 3267 3001 260 378 22 18 chr17 34998447 34998672 -54505881 - L2 LINE L2 -499 2815 2590 554 272 69 29 chr17 34999851 35000024 -54504529 - MIR3 SINE MIR -10 198 19 415 274 89 7 chr17 35000530 35000665 -54503888 - MIR SINE MIR -70 192 47 225 228 30 89 chr17 35000978 35001079 -54503474 - MIR SINE MIR -72 190 96 180 0 0 0 chr17 35001202 35001222 -54503331 + (A)n Simple_repeat Simple_repeat 1 20 0 398 312 36 29 chr17 35001250 35001388 -54503165 - MIR SINE MIR -15 247 109 338 357 103 23 chr17 35001407 35001805 -54502748 - L1MEd LINE L1 -5368 751 322 240 303 78 64 chr17 35002597 35002815 -54501738 + MIR SINE MIR 21 241 -21 351 294 48 32 chr17 35004011 35004137 -54500416 - L2 LINE L2 0 3272 3145 342 298 30 30 chr17 35004991 35005122 -54499431 - L2 LINE L2 -220 3052 2922 286 347 58 28 chr17 35005430 35005622 -54498931 - MIR SINE MIR -44 218 25 255 170 21 0 chr17 35005936 35005983 -54498570 - L3 LINE CR1 -5 1572 1525 409 291 27 67 chr17 35006101 35006342 -54498211 + MIR SINE MIR 13 248 -14 1335 231 47 3 chr17 35006373 35006671 -54497882 - MER58B DNA MER1_type 0 341 31 514 297 18 12 chr17 35007195 35007360 -54497193 + MIR SINE MIR 97 262 0 199 348 36 27 chr17 35008155 35008267 -54496286 - MIR SINE MIR -75 133 21 276 320 118 26 chr17 35008516 35008669 -54495884 + MIR SINE MIR 32 198 -64 * 853 306 0 16 chr17 35008665 35008907 -54495646 - MIR SINE MIR 0 262 25 2087 112 0 34 chr17 35009082 35009403 -54495150 - AluSx SINE Alu -2 310 1 319 266 9 44 chr17 35009472 35009585 -54494968 + L1ME3A LINE L1 6062 6170 0 396 270 51 22 chr17 35009598 35009776 -54494777 + L1MC4 LINE L1 7860 8042 0 240 255 0 0 chr17 35010235 35010286 -54494267 + L2 LINE L2 3016 3066 -247 182 286 60 12 chr17 35010333 35010417 -54494136 + MIR SINE MIR 129 216 -46 350 296 43 0 chr17 35010741 35010856 -54493697 - MIR SINE MIR -58 204 85 344 188 43 29 chr17 35011679 35011748 -54492805 - L2 LINE L2 -3 3310 3241 316 294 169 22 chr17 35012537 35012721 -54491832 + MIR SINE MIR 33 243 -19 1527 284 9 39 chr17 35014735 35015107 -54489446 + LTR16A LTR ERVL 1 358 -92 1917 104 7 55 chr17 35015107 35015415 -54489138 - AluSc SINE Alu -16 293 1 1527 284 9 39 chr17 35015415 35015506 -54489047 + LTR16A LTR ERVL 358 450 0 461 349 35 12 chr17 35015579 35015748 -54488805 - MIR SINE MIR -70 192 20 390 229 0 0 chr17 35015769 35015865 -54488688 + GA-rich Low_complexity Low_complexity 3 98 0 821 248 58 16 chr17 35015875 35016117 -54488436 - MIR SINE MIR -5 257 6 287 380 30 0 chr17 35016793 35016893 -54487660 + L2 LINE L2 2951 3053 -219 339 265 0 0 chr17 35016938 35017006 -54487547 + MIR SINE MIR 57 124 -138 283 250 0 0 chr17 35017132 35017188 -54487365 + L2 LINE L2 3258 3313 0 21 0 0 0 chr17 35017519 35017540 -54487013 + AT_rich Low_complexity Low_complexity 1 21 0 1079 179 32 32 chr17 35017891 35018109 -54486444 + MER20 DNA MER1_type 1 218 -1 209 242 61 15 chr17 35018725 35018791 -54485762 - MIR SINE MIR -70 192 124 377 253 13 0 chr17 35019567 35019646 -54484907 - MER5A DNA MER1_type -97 92 13 311 176 162 0 chr17 35019833 35019907 -54484646 + MER103 DNA DNA 1 86 -80 943 261 65 70 chr17 35019990 35020449 -54484104 + L2 LINE L2 2849 3305 -8 371 230 50 20 chr17 35020876 35020976 -54483577 - MIR SINE MIR -65 197 95 557 240 112 66 chr17 35021153 35021349 -54483204 - MIR SINE MIR 0 262 58 342 286 71 7 chr17 35021646 35021786 -54482767 - MIR3 SINE MIR -30 178 30 333 47 0 0 chr17 35021806 35021849 -54482704 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 367 289 16 33 chr17 35022148 35022269 -54482284 - L2 LINE L2 -191 3081 2963 204 261 0 0 chr17 35022401 35022447 -54482106 - L2 LINE L2 -11 3261 3216 1808 107 50 36 chr17 35022455 35022736 -54481817 + THE1B LTR MaLR 80 364 0 652 268 54 60 chr17 35022949 35023263 -54481290 + LTR16A1 LTR ERVL 146 457 0 246 348 118 14 chr17 35024010 35024297 -54480256 - L2 LINE L2 -666 2648 2332 560 191 213 20 chr17 35024314 35024519 -54480034 + MIR SINE MIR 18 252 -10 22 0 0 0 chr17 35024522 35024544 -54480009 + AT_rich Low_complexity Low_complexity 1 22 0 185 270 240 0 chr17 35024765 35024865 -54479688 - L2 LINE L2 -13 3259 3136 471 295 47 42 chr17 35025380 35025570 -54478983 - MIR3 SINE MIR -15 193 3 217 281 167 9 chr17 35026148 35026262 -54478291 + MIR3 SINE MIR 2 133 -75 359 271 65 9 chr17 35026897 35027004 -54477549 + MLT1L LTR MaLR 433 545 -70 276 279 79 14 chr17 35027097 35027237 -54477316 + L1ME4a LINE L1 5711 5859 -262 432 305 44 55 chr17 35027367 35027639 -54476914 + L1ME4a LINE L1 5852 6120 -1 316 248 26 68 chr17 35029431 35029548 -54475005 - MIR SINE MIR -110 152 41 2197 254 111 8 chr17 35029624 35030343 -54474210 + LTR50 LTR ERVL 1 793 -2 23 0 0 0 chr17 35030369 35030392 -54474161 + AT_rich Low_complexity Low_complexity 1 23 0 228 125 18 107 chr17 35030436 35030492 -54474061 + L2 LINE L2 3263 3313 0 2596 111 8 0 chr17 35031726 35032087 -54472466 - THE1B LTR MaLR 0 364 1 10390 99 36 48 chr17 35032087 35033686 -54470867 - THE1B-int LTR MaLR 0 1580 1 2095 164 45 33 chr17 35033687 35034230 -54470323 - MLT2A2 LTR ERVL -1 553 3 1196 300 96 30 chr17 35034233 35034773 -54469780 + MLT1K LTR MaLR 10 585 -3 331 328 167 20 chr17 35034858 35035134 -54469419 + L2 LINE L2 2728 3036 -236 189 217 171 85 chr17 35035192 35035321 -54469232 + L2 LINE L2 3174 3313 0 226 260 0 0 chr17 35036659 35036709 -54467844 - L2 LINE L2 -219 3053 3004 213 143 0 29 chr17 35036708 35036743 -54467810 + L2 LINE L2 3258 3291 -22 * 180 229 62 0 chr17 35037213 35037261 -54467292 + L2 LINE L2 3004 3054 -218 358 258 47 55 chr17 35037425 35037553 -54467000 - MIR SINE MIR -122 140 14 279 235 175 0 chr17 35037773 35037917 -54466636 - MIR3 SINE MIR 0 208 35 201 183 28 28 chr17 35037946 35038017 -54466536 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 298 319 106 9 chr17 35038240 35038353 -54466200 + MIR SINE MIR 19 142 -66 446 292 97 0 chr17 35038404 35038548 -54466005 - MER117 DNA MER1_type -33 164 7 196 231 209 22 chr17 35039161 35039252 -54465301 + MIR SINE MIR 21 128 -80 557 299 70 6 chr17 35039523 35039680 -54464873 - MIR SINE MIR -95 167 1 629 254 0 36 chr17 35039965 35040130 -54464423 - MIR SINE MIR -96 166 8 539 261 83 24 chr17 35040607 35040802 -54463751 + MIR SINE MIR 12 213 -49 289 239 45 23 chr17 35040970 35041058 -54463495 - MIR SINE MIR -70 192 103 1456 211 3 20 chr17 35041587 35041886 -54462667 - AluJb SINE Alu -18 294 1 240 235 73 0 chr17 35042100 35042168 -54462385 - MIR SINE MIR -34 228 156 791 186 0 32 chr17 35042181 35042337 -54462216 + MER45A DNA AcHobo 28 178 0 287 200 100 14 chr17 35042337 35042407 -54462146 - MIR SINE MIR -97 165 90 328 273 70 23 chr17 35043369 35043497 -54461056 - MER5B DNA MER1_type -41 137 4 229 153 0 119 chr17 35043635 35043694 -54460859 + L2 LINE L2 3221 3272 0 1247 256 92 24 chr17 35043779 35044233 -54460320 - LTR16C LTR ERVL -2 489 5 1279 156 33 0 chr17 35044417 35044629 -54459924 - MER20 DNA MER1_type 0 219 1 248 224 0 0 chr17 35045769 35045818 -54458735 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 348 174 0 chr17 35046053 35046145 -54458408 - MIR SINE MIR -74 134 27 228 341 8 48 chr17 35046325 35046451 -54458102 - MIR SINE MIR -42 220 100 188 320 50 50 chr17 35046554 35046654 -54457899 + L2 LINE L2 3208 3307 -6 226 239 56 14 chr17 35047240 35047311 -54457242 + MIR3 SINE MIR 89 162 -46 193 328 0 0 chr17 35048417 35048478 -54456075 + MIR3 SINE MIR 117 177 -31 343 410 11 6 chr17 35048519 35048697 -54455856 + MIR3 SINE MIR 16 194 -14 393 22 0 0 chr17 35048953 35048999 -54455554 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 1092 252 6 55 chr17 35049152 35049477 -54455076 + L2 LINE L2 3005 3313 0 263 361 49 8 chr17 35049690 35049812 -54454741 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 35049955 35050065 -54454488 - MARNA DNA Mariner -92 494 391 851 270 58 14 chr17 35050465 35050537 -54454016 - L1MD3 LINE L1 -11 7984 7917 1821 159 0 10 chr17 35050537 35050851 -54453702 - AluY SINE Alu 0 311 1 851 270 58 14 chr17 35050851 35051056 -54453497 - L1MD3 LINE L1 -78 7917 7695 401 130 29 0 chr17 35251066 35251135 -54253418 - LTR56 LTR ERV1 -178 267 197 471 222 104 52 chr17 35251555 35251767 -54252786 + L1ME3 LINE L1 5937 6159 -3 308 336 32 24 chr17 35252338 35252463 -54252090 + MIR3 SINE MIR 30 155 -53 405 288 62 23 chr17 35252470 35252647 -54251906 + MER117 DNA MER1_type 3 186 -11 207 360 93 7 chr17 35253758 35253897 -54250656 - MIR3 SINE MIR -2 206 56 360 279 18 9 chr17 35254198 35254309 -54250244 - MIR3 SINE MIR -48 160 49 836 273 45 4 chr17 35255293 35255535 -54249018 - MLT1I LTR MaLR -155 254 3 841 120 0 0 chr17 35256495 35256612 -54247941 - FLAM_C SINE Alu -12 121 5 584 225 27 0 chr17 35257006 35257117 -54247436 - MER81 DNA DNA 0 114 1 204 241 0 0 chr17 35257202 35257260 -54247293 + (TA)n Simple_repeat Simple_repeat 1 58 0 316 298 51 19 chr17 35257261 35257476 -54247077 - L1ME4a LINE L1 -158 5963 5742 31 44 0 0 chr17 35257476 35257521 -54247032 + AT_rich Low_complexity Low_complexity 1 45 0 2063 114 29 0 chr17 35257666 35257946 -54246607 + AluSx SINE Alu 1 288 -24 239 170 43 0 chr17 35257953 35258000 -54246553 + MLT1E2 LTR MaLR 19 67 -559 1541 282 81 27 chr17 35258184 35258702 -54245851 + MLT1E2 LTR MaLR 81 626 0 525 225 130 10 chr17 35258754 35258954 -54245599 + L1ME3 LINE L1 5938 6161 -1 26 0 0 0 chr17 35259088 35259114 -54245439 + AT_rich Low_complexity Low_complexity 1 26 0 309 224 190 9 chr17 35259936 35260052 -54244501 + MIR SINE MIR 8 144 -118 317 293 33 40 chr17 35261174 35261324 -54243229 + MER5A DNA MER1_type 38 186 -3 224 274 23 11 chr17 35262096 35262213 -54242340 - MIR SINE MIR -62 146 33 1989 216 52 25 chr17 35263566 35264047 -54240506 + MER9 LTR ERVK 18 511 0 1650 186 7 0 chr17 35264048 35264323 -54240230 - AluJb SINE Alu -35 277 1 260 244 37 12 chr17 35266348 35266430 -54238123 + MIR SINE MIR 164 247 -15 312 297 70 8 chr17 35267584 35267712 -54236841 - MIR SINE MIR -35 227 92 244 268 32 70 chr17 35267895 35268015 -54236538 + MER5A DNA MER1_type 62 175 -3 578 247 17 56 chr17 35268268 35268446 -54236107 + LTR16A LTR ERVL 104 274 -176 951 319 67 50 chr17 35268593 35269379 -54235174 + HERVL LTR ERVL 3042 3841 -1813 43474 33 23 1 chr17 35269380 35275382 -54229171 + L1PA2 LINE L1 22 6155 0 1310 350 33 31 chr17 35275709 35276824 -54227729 + HERVL LTR ERVL 4201 5324 -161 737 293 70 29 chr17 35276980 35277294 -54227259 + LTR16A LTR ERVL 17 343 -107 489 292 0 22 chr17 35278879 35279016 -54225537 - MER94 DNA DNA 0 134 1 39 0 0 0 chr17 35279995 35280034 -54224519 + AT_rich Low_complexity Low_complexity 1 39 0 655 309 42 58 chr17 35281025 35281407 -54223146 + MLT1I LTR MaLR 1 376 -33 308 206 111 56 chr17 35283137 35283263 -54221290 + MER117 DNA MER1_type 23 155 -42 546 330 55 0 chr17 35283429 35283647 -54220906 + MIR SINE MIR 33 262 0 2061 149 0 3 chr17 35283666 35283968 -54220585 + AluSx SINE Alu 1 301 -11 30354 109 12 13 chr17 35284647 35290425 -54214128 - L1PA7 LINE L1 0 6469 680 261 163 0 0 chr17 35290427 35290476 -54214077 + A-rich Low_complexity Low_complexity 1 49 0 295 289 86 8 chr17 35290985 35291113 -54213440 - MIR SINE MIR -32 230 93 33 25 0 0 chr17 35291177 35291217 -54213336 + AT_rich Low_complexity Low_complexity 1 40 0 1659 168 21 7 chr17 35291217 35291508 -54213045 - AluJo SINE Alu -17 295 1 489 296 137 51 chr17 35291613 35291964 -54212589 - MLT1J2 LTR MaLR -3 447 67 1447 75 0 0 chr17 35292358 35292546 -54212007 + L1PA6 LINE L1 5967 6154 0 689 78 0 10 chr17 35292915 35293017 -54211536 + (TTCTCC)n Simple_repeat Simple_repeat 2 102 0 490 277 236 34 chr17 35293551 35293843 -54210710 - MLT1J2 LTR MaLR -33 417 67 182 292 50 67 chr17 35294044 35294164 -54210389 + MER5A DNA MER1_type 48 165 -24 2309 177 72 5 chr17 35294619 35295049 -54209504 + LTR24 LTR ERV1 8 466 -1 24 32 0 0 chr17 35295846 35295877 -54208676 + AT_rich Low_complexity Low_complexity 1 31 0 188 276 95 35 chr17 35297246 35297362 -54207191 + MIR SINE MIR 19 141 -67 325 181 24 60 chr17 35298140 35298223 -54206330 - MLT1G1 LTR MaLR 0 595 516 357 24 0 0 chr17 35298331 35298373 -54206180 + (TG)n Simple_repeat Simple_repeat 1 42 0 328 218 26 0 chr17 35298428 35298506 -54206047 - MLT1J2 LTR MaLR -501 89 10 200 111 67 44 chr17 35299230 35299275 -54205278 + T-rich Low_complexity Low_complexity 2 47 0 22 0 0 0 chr17 35299691 35299713 -54204840 + AT_rich Low_complexity Low_complexity 1 22 0 960 250 177 26 chr17 35299729 35300642 -54203911 - L1M4 LINE L1 -3748 2634 1560 * 1792 155 30 0 chr17 35300637 35300934 -54203619 + L1MB1 LINE L1 5688 5993 -175 236 289 74 52 chr17 35300984 35301119 -54203434 + MER117 DNA MER1_type 16 153 -44 414 283 57 28 chr17 35301334 35301511 -54203042 + MIR SINE MIR 81 262 0 249 301 14 14 chr17 35301812 35301885 -54202668 + MLT1I LTR MaLR 95 167 -242 600 198 0 0 chr17 35302025 35302131 -54202422 + L1MD3 LINE L1 7880 7985 -10 * 8844 201 35 30 chr17 35302107 35304091 -54200462 + L1MB2 LINE L1 2922 4895 -1276 2421 65 7 0 chr17 35304091 35304384 -54200169 + AluSp SINE Alu 2 296 -17 8844 201 35 30 chr17 35304384 35304513 -54200040 + L1MB2 LINE L1 4895 5022 -1149 2124 139 3 0 chr17 35304513 35304807 -54199746 - AluSq SINE Alu -18 295 1 8844 201 35 30 chr17 35304807 35305025 -54199528 + L1MB2 LINE L1 5022 5237 -934 2022 144 3 3 chr17 35305025 35305324 -54199229 + AluSq SINE Alu 1 299 -14 8844 201 35 30 chr17 35305324 35306213 -54198340 + L1MB2 LINE L1 5237 6164 -7 1914 194 63 73 chr17 35307541 35307567 -54196986 + MLT1D LTR MaLR 21 46 -459 2278 107 30 0 chr17 35307567 35307866 -54196687 + AluSx SINE Alu 1 308 -4 1914 194 63 73 chr17 35307866 35308329 -54196224 + MLT1D LTR MaLR 46 505 0 804 180 20 0 chr17 35308329 35308479 -54196074 + MLT1D-int LTR MaLR 1 153 -1218 210 238 12 88 chr17 35309684 35309764 -54194789 + L2 LINE L2 2564 2637 -677 526 245 61 0 chr17 35313164 35313311 -54191242 - MIR SINE MIR -20 242 87 303 215 103 19 chr17 35315880 35315987 -54188566 - MIR3 SINE MIR -11 197 82 357 161 37 0 chr17 35317026 35317107 -54187446 - MER5A DNA MER1_type -78 111 28 194 196 130 0 chr17 35317353 35317399 -54187154 + MER5A DNA MER1_type 52 103 -86 2287 118 0 0 chr17 35317408 35317714 -54186839 - AluSx SINE Alu -6 306 1 462 266 67 10 chr17 35317942 35318140 -54186413 + MIR SINE MIR 3 211 -51 242 282 26 0 chr17 35318562 35318640 -54185913 + L2 LINE L2 3230 3309 -4 263 221 130 13 chr17 35319297 35319374 -54185179 + L2 LINE L2 3211 3296 -17 402 85 0 0 chr17 35319522 35319581 -54184972 + (TG)n Simple_repeat Simple_repeat 2 60 0 270 307 60 37 chr17 35320714 35320907 -54183646 - MIR3 SINE MIR -58 150 7 2154 142 0 0 chr17 35322311 35322620 -54181933 - AluSq SINE Alu -4 309 1 677 280 31 59 chr17 35322651 35322937 -54181616 + Charlie8 DNA MER1_type 2 253 -2164 193 259 19 19 chr17 35323063 35323117 -54181436 + L2 LINE L2 2267 2320 -994 184 265 0 0 chr17 35324311 35324360 -54180193 - L2 LINE L2 0 3313 3265 237 289 0 79 chr17 35324777 35324891 -54179662 - MIR SINE MIR -92 116 13 355 254 27 18 chr17 35325572 35325682 -54178871 - MIR SINE MIR -62 146 36 270 0 0 0 chr17 35326755 35326785 -54177768 + (TAA)n Simple_repeat Simple_repeat 1 30 0 217 295 50 50 chr17 35326846 35326985 -54177568 - L2 LINE L2 0 3313 3175 236 329 86 7 chr17 35327077 35327217 -54177336 + L2 LINE L2 2606 2756 -558 2880 191 6 32 chr17 35327489 35327944 -54176609 + MLT2B1 LTR ERVL 10 476 -44 207 0 0 0 chr17 35327944 35327967 -54176586 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 2090 128 10 0 chr17 35327968 35328441 -54176112 - AluSx SINE Alu 0 476 1 2880 191 6 32 chr17 35328441 35328507 -54176046 + MLT2B1 LTR ERVL 475 520 0 29 0 0 0 chr17 35329335 35329364 -54175189 + AT_rich Low_complexity Low_complexity 1 29 0 2182 96 20 3 chr17 35329370 35329662 -54174891 + AluSq SINE Alu 1 297 -16 374 278 65 29 chr17 35329734 35329903 -54174650 - MIR SINE MIR -60 148 19 458 251 42 12 chr17 35330452 35330619 -54173934 + MER113 DNA MER1_type? 24 195 -326 180 97 0 0 chr17 35330709 35330740 -54173813 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 409 198 22 11 chr17 35330755 35330846 -54173707 + MER113 DNA MER1_type? 357 448 -73 260 310 35 0 chr17 35332667 35332780 -54171773 - MIR SINE MIR -12 250 134 688 260 48 26 chr17 35333177 35333404 -54171149 + MIR SINE MIR 31 262 0 303 93 0 0 chr17 35333794 35333837 -54170716 + (TG)n Simple_repeat Simple_repeat 1 43 0 3233 145 116 64 chr17 35334249 35334432 -54170121 - LTR8A LTR ERV1 -2 725 553 1198 84 6 6 chr17 35334432 35334610 -54169943 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1720 180 10 3 chr17 35334614 35334903 -54169650 - AluJb SINE Alu -20 292 2 3233 145 116 64 chr17 35334903 35335403 -54169150 - LTR8A LTR ERV1 -176 551 1 5543 101 19 23 chr17 35335540 35335757 -54168796 - L1PA15 LINE L1 -2 6163 5947 1830 155 3 56 chr17 35335757 35336079 -54168474 - AluJo SINE Alu -2 310 6 5543 101 19 23 chr17 35336079 35337424 -54167129 - L1PA15 LINE L1 -218 5947 4664 1928 146 42 0 chr17 35337424 35337711 -54166842 - AluSx SINE Alu -13 299 1 5543 101 19 23 chr17 35337711 35338119 -54166434 - L1PA15 LINE L1 -1501 4664 4256 950 112 13 26 chr17 35338153 35338305 -54166248 - LTR8A LTR ERV1 -577 150 1 5073 106 6 1 chr17 35338614 35339302 -54165251 - LTR8 LTR ERV1 0 691 1 3380 117 15 52 chr17 35339411 35340007 -54164546 - MER4B LTR ERV1 -36 574 1 1801 164 3 14 chr17 35340171 35340552 -54164001 + AluSx SINE Alu 2 379 0 471 303 66 20 chr17 35340917 35341154 -54163399 - MIR SINE MIR -6 256 6 279 133 0 0 chr17 35342554 35342599 -54161954 + (TG)n Simple_repeat Simple_repeat 2 46 0 221 222 32 16 chr17 35343214 35343277 -54161276 - MER5A DNA MER1_type -11 178 115 830 306 92 22 chr17 35343298 35343710 -54160843 - MLT1J2 LTR MaLR 0 450 10 249 184 61 0 chr17 35344105 35344154 -54160399 + MIR SINE MIR 101 152 -56 240 261 120 22 chr17 35344317 35344409 -54160144 + MER5A DNA MER1_type 9 109 -80 422 295 33 0 chr17 35345165 35345287 -54159266 - L2 LINE L2 0 3313 3188 325 247 82 88 chr17 35345306 35345476 -54159077 - MIR SINE MIR -5 257 89 423 299 162 0 chr17 35346092 35346246 -54158307 - MER5A DNA MER1_type 0 189 11 472 320 34 11 chr17 35346263 35346441 -54158112 - MIR SINE MIR 0 262 81 433 277 113 6 chr17 35347183 35347342 -54157211 + MER5A DNA MER1_type 13 188 -1 402 335 132 19 chr17 35347386 35347598 -54156955 + MIR SINE MIR 20 255 -7 315 335 125 27 chr17 35347779 35348308 -54156245 + L3 LINE CR1 738 1390 -187 293 348 81 0 chr17 35348365 35348526 -54156027 - MIR SINE MIR -81 181 8 276 302 198 0 chr17 35348533 35348639 -54155914 + L3 LINE CR1 1379 1505 -72 2198 178 35 113 chr17 35349271 35349420 -54155133 + L1MB7 LINE L1 614 773 -5769 2063 118 3 33 chr17 35349420 35349724 -54154829 - AluSx SINE Alu -17 295 1 2198 178 35 113 chr17 35349724 35350036 -54154517 + L1MB7 LINE L1 773 1020 -5522 7320 66 6 0 chr17 35350036 35351001 -54153552 + L1PA7 LINE L1 5183 6152 -2 2198 178 35 113 chr17 35351001 35351138 -54153415 + L1MB7 LINE L1 1020 1166 -5376 957 246 9 23 chr17 35351136 35351478 -54153075 + L1MB7 LINE L1 3538 3874 -2770 * 1177 174 17 131 chr17 35351472 35351731 -54152822 + L1MB7 LINE L1 4519 4729 -1915 884 140 7 37 chr17 35351731 35351867 -54152686 + AluJo SINE Alu 2 133 -169 1177 174 17 131 chr17 35351867 35351957 -54152596 + L1MB7 LINE L1 4729 4828 -1816 41781 70 7 2 chr17 35351969 35358082 -54146471 + L1PA5 LINE L1 11 6152 -2 982 192 68 4 chr17 35358103 35358337 -54146216 + L1MB7 LINE L1 4814 5062 -1582 2625 183 48 26 chr17 35358338 35358842 -54145711 + MLT2B3 LTR ERVL 1 515 -39 316 215 0 0 chr17 35358851 35358916 -54145637 + Ricksha DNA DNA 836 900 -2346 4200 190 38 16 chr17 35358917 35359065 -54145488 + L1MB7 LINE L1 5056 5199 -1483 2284 108 0 10 chr17 35359065 35359379 -54145174 + AluY SINE Alu 1 311 0 4200 190 38 16 chr17 35359379 35360801 -54143752 + L1MB7 LINE L1 5199 6663 -19 2198 118 3 3 chr17 35361669 35361973 -54142580 + AluSq SINE Alu 1 304 -9 308 284 135 7 chr17 35363556 35363697 -54140856 - MIR3 SINE MIR -30 178 20 319 326 11 0 chr17 35363738 35363827 -54140726 + MIR SINE MIR 61 150 -112 564 296 190 0 chr17 35364360 35364644 -54139909 + MLT1I LTR MaLR 72 409 0 586 345 34 8 chr17 35365766 35366001 -54138552 + MIR SINE MIR 2 242 -20 240 312 176 54 chr17 35366325 35366604 -54137949 + L2 LINE L2 2957 3269 -3 472 254 60 90 chr17 35366854 35366986 -54137567 + MIR SINE MIR 30 164 -98 894 201 13 0 chr17 35366986 35367135 -54137418 + AluJo SINE Alu 137 287 -15 284 0 0 27 chr17 35367138 35367175 -54137378 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 472 254 60 90 chr17 35367175 35367271 -54137282 + MIR SINE MIR 166 249 -13 2877 227 67 46 chr17 35367992 35369029 -54135524 - L1ME2 LINE L1 0 6164 5106 263 274 0 16 chr17 35369029 35369091 -54135462 + polypyrimidine Low_complexity Low_complexity 3 63 0 766 130 11 33 chr17 35369092 35369276 -54135277 + CT-rich Low_complexity Low_complexity 1 180 0 204 97 0 0 chr17 35369290 35369321 -54135232 + (TCTCC)n Simple_repeat Simple_repeat 4 34 0 246 229 0 0 chr17 35369362 35369410 -54135143 - L1ME2 LINE L1 -1071 5075 5028 1743 158 63 0 chr17 35369412 35369696 -54134857 - MER7A DNA MER2_type -2 344 45 3728 250 70 15 chr17 35369745 35371068 -54133485 - L1ME2 LINE L1 -1167 4979 3585 293 273 124 25 chr17 35371106 35371267 -54133286 + MIR SINE MIR 74 250 -12 233 286 40 53 chr17 35371433 35371565 -54132988 - MIR SINE MIR -57 151 70 230 356 10 29 chr17 35371751 35371855 -54132698 + MIR SINE MIR 77 178 -84 * 491 289 128 20 chr17 35371825 35372029 -54132524 - MIR SINE MIR -1 261 36 422 179 0 0 chr17 35372037 35372115 -54132438 + L1MA10 LINE L1 6250 6327 -7 262 231 0 26 chr17 35372197 35372275 -54132278 + L1ME3 LINE L1 6083 6158 -4 196 197 15 15 chr17 35372519 35372585 -54131968 + (TA)n Simple_repeat Simple_repeat 2 67 0 209 95 0 24 chr17 35372612 35372654 -54131899 + (TAAAAA)n Simple_repeat Simple_repeat 6 46 0 207 297 0 0 chr17 35372735 35372836 -54131717 + (TA)n Simple_repeat Simple_repeat 1 101 0 267 170 149 32 chr17 35373409 35373503 -54131050 - L1ME4a LINE L1 -209 5912 5808 609 300 101 22 chr17 35373869 35374315 -54130238 - L1ME4a LINE L1 -348 5773 5293 2127 119 3 0 chr17 35374350 35374652 -54129901 + AluSq SINE Alu 1 303 -10 2176 96 7 10 chr17 35374762 35375064 -54129489 - AluSx SINE Alu -11 301 1 315 259 0 0 chr17 35375224 35375309 -54129244 - L1ME4a LINE L1 -1318 4828 4744 2834 244 57 44 chr17 35375351 35376516 -54128037 - L1ME3A LINE L1 -1 6169 4987 1214 29 0 0 chr17 35376516 35376652 -54127901 - L1PA5 LINE L1 -5 6149 6014 2834 244 57 44 chr17 35376652 35376760 -54127793 - L1ME3A LINE L1 -1183 4987 4882 464 229 71 14 chr17 35376785 35376925 -54127628 + L1ME3A LINE L1 5797 5944 -226 * 740 271 22 22 chr17 35376909 35376956 -54127597 - L1ME3A LINE L1 -1282 4864 4818 1711 154 0 77 chr17 35376956 35377280 -54127273 - AluJo SINE Alu -13 299 1 740 271 22 22 chr17 35377280 35377509 -54127044 - L1ME3A LINE L1 -1327 4819 4588 39 80 0 0 chr17 35377589 35377677 -54126876 + AT_rich Low_complexity Low_complexity 1 88 0 2337 88 7 0 chr17 35378380 35378675 -54125878 - AluSc SINE Alu -12 297 1 636 98 0 0 chr17 35378756 35378838 -54125715 + AluY SINE Alu 2 83 -227 2603 91 91 21 chr17 35378840 35379259 -54125294 - LTR7 LTR ERV1 -2 448 1 2625 69 48 13 chr17 35379259 35379638 -54124915 - HERVH LTR ERV1 0 7713 7322 1325 130 33 9 chr17 35379636 35379851 -54124702 - HERVH LTR ERV1 -1894 5819 5600 * 4083 147 14 18 chr17 35379852 35380517 -54124036 - HERVH LTR ERV1 -2564 5149 4488 3377 118 6 2 chr17 35380519 35381019 -54123534 - HERVH LTR ERV1 -3720 3993 3492 * 20256 101 58 29 chr17 35381009 35384209 -54120344 - HERVH LTR ERV1 -4423 3290 1 2830 91 58 19 chr17 35384211 35384642 -54119911 - LTR7 LTR ERV1 -2 448 1 1910 45 0 0 chr17 35384642 35384862 -54119691 + AluY SINE Alu 79 298 -13 331 297 158 22 chr17 35384862 35385084 -54119469 - L2 LINE L2 -584 2730 2479 306 260 21 52 chr17 35385425 35385521 -54119032 - MIR3 SINE MIR -19 189 97 280 328 141 8 chr17 35385567 35385695 -54118858 + MIR SINE MIR 1 145 -117 337 301 82 36 chr17 35385827 35386046 -54118507 + MIR SINE MIR 20 248 -14 251 172 0 17 chr17 35386072 35386130 -54118423 + CT-rich Low_complexity Low_complexity 2 58 0 6169 164 36 27 chr17 35386141 35387781 -54116772 - L1MC1 LINE L1 0 6333 4684 189 0 0 0 chr17 35388833 35388854 -54115699 + (T)n Simple_repeat Simple_repeat 1 21 0 332 321 82 30 chr17 35389232 35389366 -54115187 + MIR SINE MIR 8 148 -114 203 61 30 0 chr17 35389666 35389699 -54114854 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 313 301 44 35 chr17 35391672 35391785 -54112768 + MIR SINE MIR 120 233 -29 320 271 39 16 chr17 35391801 35391930 -54112623 - MER94 DNA DNA -1 133 2 1159 12 47 0 chr17 35392506 35392675 -54111878 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 727 269 42 14 chr17 35392720 35392936 -54111617 + MIR SINE MIR 39 260 -2 413 282 9 9 chr17 35393198 35393308 -54111245 + MIR SINE MIR 20 129 -133 3516 146 25 31 chr17 35393310 35393914 -54110639 + LTR9 LTR ERV1 1 600 -12 405 223 27 115 chr17 35394033 35394181 -54110372 + L2 LINE L2 3179 3313 0 1960 175 92 157 chr17 35394756 35395529 -54109024 + LTR8A LTR ERV1 1 723 -4 194 292 79 56 chr17 35395709 35395798 -54108755 + L2 LINE L2 3150 3240 -32 216 0 0 0 chr17 35395813 35395837 -54108716 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1150 129 110 10 chr17 35396481 35396690 -54107863 - MER30 DNA MER1_type 0 230 1 27 29 0 0 chr17 35396897 35396931 -54107622 + AT_rich Low_complexity Low_complexity 1 34 0 1784 160 3 3 chr17 35396933 35397221 -54107332 - AluJo SINE Alu -24 288 1 189 94 0 0 chr17 35397827 35397859 -54106694 + (A)n Simple_repeat Simple_repeat 1 32 0 651 301 24 10 chr17 35399455 35399661 -54104892 - MIR SINE MIR -46 216 8 227 304 122 9 chr17 35399734 35399849 -54104704 + MIR SINE MIR 76 203 -59 299 297 55 26 chr17 35400371 35400537 -54104016 + MIR SINE MIR 37 206 -56 466 266 98 81 chr17 35400625 35400805 -54103748 + MIR SINE MIR 4 177 -85 1418 155 5 14 chr17 35400805 35401024 -54103529 + MER20 DNA MER1_type 2 218 -1 466 266 98 81 chr17 35401024 35401108 -54103445 + MIR SINE MIR 177 258 -4 186 379 0 0 chr17 35401782 35401848 -54102705 + L2 LINE L2 3186 3251 -21 542 325 78 5 chr17 35402084 35402290 -54102263 - MIR SINE MIR 0 262 42 316 263 26 4 chr17 35402377 35402470 -54102083 + MIR SINE MIR 64 156 -52 349 265 138 25 chr17 35403119 35403300 -54101253 + MIR3 SINE MIR 8 212 -50 206 211 18 18 chr17 35403567 35403624 -54100929 + T-rich Low_complexity Low_complexity 5 61 0 1593 164 20 16 chr17 35404900 35405204 -54099349 + AluJo SINE Alu 1 305 -7 484 296 193 44 chr17 35405589 35405951 -54098602 - L2 LINE L2 -1 3312 2897 254 267 89 11 chr17 35406020 35406110 -54098443 + MER5A DNA MER1_type 72 168 -21 507 258 81 40 chr17 35407553 35407751 -54096802 + MIR SINE MIR 22 227 -35 482 306 13 13 chr17 35408068 35408225 -54096328 - MIR SINE MIR -26 236 80 263 362 60 47 chr17 35408585 35408734 -54095819 + L2 LINE L2 3122 3272 0 297 0 0 0 chr17 35408873 35408906 -54095647 + (TG)n Simple_repeat Simple_repeat 2 34 0 660 297 43 17 chr17 35408974 35409206 -54095347 + MIR SINE MIR 18 255 -7 324 0 0 0 chr17 35409837 35409873 -54094680 + (CA)n Simple_repeat Simple_repeat 2 37 0 432 0 0 0 chr17 35409914 35409962 -54094591 + (CA)n Simple_repeat Simple_repeat 2 49 0 234 91 0 0 chr17 35412229 35412262 -54092291 + (TG)n Simple_repeat Simple_repeat 2 34 0 222 273 53 53 chr17 35415057 35415189 -54089364 + MIR SINE MIR 51 182 -80 27 0 0 0 chr17 35415795 35415822 -54088731 + AT_rich Low_complexity Low_complexity 1 27 0 511 311 80 28 chr17 35415835 35416047 -54088506 + MIR SINE MIR 16 238 -24 2053 106 34 0 chr17 35416703 35416995 -54087558 - AluSg SINE Alu -3 307 6 212 297 78 0 chr17 35417210 35417274 -54087279 - MIR3 SINE MIR -6 202 134 5305 129 6 20 chr17 35417284 35418153 -54086400 - L1MA8 LINE L1 0 6291 5435 202 269 39 19 chr17 35418207 35418259 -54086294 + L2 LINE L2 3186 3238 -34 349 178 0 14 chr17 35418439 35418512 -54086041 - L1ME4a LINE L1 -5 6116 6045 1396 150 0 0 chr17 35418512 35418738 -54085815 + AluJb SINE Alu 87 312 0 23 0 0 0 chr17 35418783 35418806 -54085747 + AT_rich Low_complexity Low_complexity 1 23 0 408 270 14 0 chr17 35420511 35420631 -54083922 + MIR3 SINE MIR 45 171 -37 189 147 0 0 chr17 35420764 35420798 -54083755 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1174 219 52 60 chr17 35421089 35421458 -54083095 + LTR16A1 LTR ERVL 86 451 -6 774 301 103 58 chr17 35421987 35422432 -54082121 + L3 LINE CR1 1109 1573 -4 510 275 132 21 chr17 35423077 35423266 -54081287 + MIR SINE MIR 7 216 -46 701 313 23 19 chr17 35423566 35423822 -54080731 - MIR SINE MIR 0 262 6 685 104 16 80 chr17 35423866 35424017 -54080536 - MSTB2 LTR MaLR -1 456 291 1045 218 166 3 chr17 35424233 35424522 -54080031 - MSTB2 LTR MaLR -121 336 1 359 315 0 16 chr17 35424537 35424664 -54079889 - MIR SINE MIR -66 142 18 219 367 18 9 chr17 35426086 35426195 -54078358 + L3 LINE CR1 1341 1450 -127 * 456 356 85 13 chr17 35426189 35426425 -54078128 - L2 LINE L2 -3 3269 3017 3045 256 128 57 chr17 35426433 35428424 -54076129 - L1MC4a LINE L1 0 8035 5678 394 306 6 6 chr17 35428414 35428571 -54075982 - L1MC5 LINE L1 -493 7468 7312 * 248 274 0 16 chr17 35428610 35428672 -54075881 - L1MD3 LINE L1 -509 7486 7426 508 231 82 36 chr17 35428760 35428955 -54075598 - L1MC5 LINE L1 -756 7205 7002 591 278 30 0 chr17 35429510 35429679 -54074874 - MIR SINE MIR -10 252 79 2259 159 8 6 chr17 35429857 35430215 -54074338 + MLT1A1 LTR MaLR 7 365 0 258 347 72 30 chr17 35430726 35430893 -54073660 - L2 LINE L2 -164 3108 2935 5640 123 34 8 chr17 35431010 35431889 -54072664 - MER4D LTR ERV1 0 903 2 26 0 0 0 chr17 35432034 35432060 -54072493 + AT_rich Low_complexity Low_complexity 1 26 0 848 155 93 12 chr17 35432230 35432391 -54072162 - MER5B DNA MER1_type -3 175 2 213 278 106 60 chr17 35433741 35433825 -54070728 + MIR SINE MIR 35 114 -148 646 205 114 71 chr17 35433825 35434035 -54070518 - MER20 DNA MER1_type 0 219 1 213 278 106 60 chr17 35434035 35434099 -54070454 + MIR SINE MIR 114 193 -69 273 211 0 0 chr17 35435107 35435159 -54069394 + LTR30 LTR ERV1 1 52 -670 763 84 64 249 chr17 35435159 35435456 -54069097 + LTR12 LTR ERV1 53 294 -420 231 260 14 0 chr17 35435465 35435538 -54069015 + LTR30 LTR ERV1 570 643 -79 631 140 0 0 chr17 35435542 35435635 -54068918 + LTR12 LTR ERV1 617 709 -5 284 370 9 9 chr17 35435635 35435743 -54068810 - MIR SINE MIR -126 136 29 333 284 64 50 chr17 35437015 35437156 -54067397 - L2 LINE L2 -5 3267 3125 298 253 84 12 chr17 35437282 35437365 -54067188 + L2 LINE L2 3173 3261 -11 304 286 21 50 chr17 35438101 35438241 -54066312 + MER103 DNA DNA 3 138 -28 515 297 28 0 chr17 35438561 35438706 -54065847 + MIR SINE MIR 112 260 -2 448 286 20 20 chr17 35438863 35439010 -54065543 + MER5B DNA MER1_type 24 170 -8 266 273 0 0 chr17 35439255 35439321 -54065232 - MIR SINE MIR -116 146 81 307 176 33 121 chr17 35439835 35439926 -54064627 - MIR SINE MIR -84 124 42 500 232 159 0 chr17 35440934 35441085 -54063468 + MER5A DNA MER1_type 9 183 -6 547 315 96 42 chr17 35441503 35441887 -54062666 - MLT1J2 LTR MaLR -1 449 45 238 354 0 0 chr17 35442083 35442162 -54062391 + MIR SINE MIR 72 150 -112 637 274 23 0 chr17 35442220 35442395 -54062158 + LTR67 LTR ERVL 349 527 -30 1194 222 47 47 chr17 35442897 35443275 -54061278 + MLT1A2 LTR MaLR 3 374 -16 214 122 24 0 chr17 35443587 35443628 -54060925 - MIR SINE MIR -26 236 195 384 266 12 77 chr17 35443634 35443732 -54060821 + MIR SINE MIR 99 183 -79 1805 173 7 7 chr17 35443732 35444033 -54060520 - AluSx SINE Alu -11 301 1 384 266 12 77 chr17 35444033 35444103 -54060450 + MIR SINE MIR 183 256 -6 388 285 159 7 chr17 35444107 35444258 -54060295 - MIR SINE MIR -82 180 7 312 285 35 65 chr17 35445483 35445683 -54058870 + MIR SINE MIR 34 227 -35 184 220 119 0 chr17 35445754 35445813 -54058740 - L2 LINE L2 -12 3260 3195 353 348 11 11 chr17 35446202 35446386 -54058167 - L2 LINE L2 -571 2743 2560 1896 148 79 77 chr17 35446502 35446793 -54057760 - MLT1C LTR MaLR 0 467 173 2402 102 0 3 chr17 35446793 35447106 -54057447 + AluSx SINE Alu 1 312 0 1896 148 79 77 chr17 35447106 35447280 -54057273 - MLT1C LTR MaLR -294 173 1 621 135 36 0 chr17 35447301 35447412 -54057141 - MLT1C-int LTR MaLR -14 1357 1243 511 216 0 0 chr17 35447664 35447752 -54056801 + 5S rRNA rRNA 2 89 -32 357 43 0 0 chr17 35448179 35448226 -54056327 + (TG)n Simple_repeat Simple_repeat 2 48 0 430 310 70 5 chr17 35448459 35448646 -54055907 - MIR SINE MIR -56 206 8 769 308 13 4 chr17 35449521 35449748 -54054805 - MIR SINE MIR -26 236 8 513 321 26 42 chr17 35449965 35450230 -54054323 + L2 LINE L2 2361 2621 -693 223 329 59 26 chr17 35450334 35450486 -54054067 + L2 LINE L2 2897 3053 -219 304 313 125 0 chr17 35451462 35451622 -54052931 - MIR SINE MIR -36 226 47 410 299 133 90 chr17 35452023 35452521 -54052032 + L3 LINE CR1 1047 1565 -12 200 228 35 0 chr17 35453279 35453336 -54051217 - MIR SINE MIR -150 112 54 196 297 54 0 chr17 35453850 35453924 -54050629 + MIR SINE MIR 115 192 -70 1763 177 23 0 chr17 35453932 35454237 -54050316 - AluJo SINE Alu 0 312 1 1646 203 0 3 chr17 35454248 35454538 -54050015 - AluJo SINE Alu -7 305 17 311 311 41 36 chr17 35455534 35455684 -54048869 - MIR SINE MIR -67 141 42 427 308 44 8 chr17 35455847 35456097 -54048456 - L1ME4a LINE L1 -190 5931 5673 220 336 96 0 chr17 35456118 35456222 -54048331 + MIR SINE MIR 20 133 -129 287 348 93 0 chr17 35456324 35456485 -54048068 - L1ME4a LINE L1 -2160 5648 5473 304 133 13 13 chr17 35456495 35456570 -54047983 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 2194 110 0 7 chr17 35456600 35456891 -54047662 - AluSx SINE Alu -23 289 1 225 0 0 0 chr17 35457832 35457857 -54046696 + (CATCT)n Simple_repeat Simple_repeat 2 26 0 219 114 0 0 chr17 35457876 35457911 -54046642 + (CA)n Simple_repeat Simple_repeat 1 35 0 517 294 50 68 chr17 35458225 35458623 -54045930 + L1ME3A LINE L1 5493 5883 -287 289 234 43 21 chr17 35458637 35458731 -54045822 + L1ME2 LINE L1 2290 2385 -4011 307 39 0 39 chr17 35458751 35458802 -54045751 + (TAAAA)n Simple_repeat Simple_repeat 1 49 0 1655 240 76 29 chr17 35458824 35459512 -54045041 + L1ME2 LINE L1 2325 3044 -3171 2853 248 93 93 chr17 35459527 35460301 -54044252 + L1MC4 LINE L1 5658 6431 -1611 1701 179 3 26 chr17 35460301 35460613 -54043940 - AluJb SINE Alu -7 305 1 2853 248 93 93 chr17 35460613 35461262 -54043291 + L1MC4 LINE L1 6431 7079 -963 205 71 0 48 chr17 35461262 35461304 -54043249 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 180 77 0 0 chr17 35461307 35461333 -54043220 + (CATA)n Simple_repeat Simple_repeat 1 26 0 2853 248 93 93 chr17 35461333 35462172 -54042381 + L1MC4 LINE L1 7081 8008 -34 1345 230 57 54 chr17 35462215 35464379 -54040174 + L1ME2 LINE L1 3041 5375 -858 1520 191 10 31 chr17 35464379 35464667 -54039886 + AluJo SINE Alu 1 282 -30 1345 230 57 54 chr17 35464667 35465423 -54039130 + L1ME2 LINE L1 5375 6127 -106 2032 115 3 64 chr17 35465475 35465805 -54038748 - AluSx SINE Alu -2 310 1 342 237 61 30 chr17 35465902 35466033 -54038520 + L1MC5 LINE L1 7783 7917 -44 31 44 0 0 chr17 35466245 35466290 -54038263 + AT_rich Low_complexity Low_complexity 1 45 0 612 202 43 53 chr17 35466749 35466937 -54037616 - MIR SINE MIR -28 234 49 1229 60 0 22 chr17 35468027 35468211 -54036342 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 635 154 18 30 chr17 35468212 35468381 -54036172 + CT-rich Low_complexity Low_complexity 4 170 0 916 117 11 22 chr17 35468525 35468705 -54035848 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 282 325 57 0 chr17 35469104 35469227 -54035326 - L2 LINE L2 0 3313 3184 275 356 42 0 chr17 35469627 35469745 -54034808 + L2 LINE L2 3123 3245 -27 221 256 77 0 chr17 35469937 35470015 -54034538 + MIR SINE MIR 117 200 -62 271 156 13 182 chr17 35470051 35470128 -54034425 - MER2 DNA MER2_type -1 344 281 712 186 186 42 chr17 35470184 35470399 -54034154 - MLT1C LTR MaLR -221 246 1 301 334 122 30 chr17 35470837 35470920 -54033633 + L2 LINE L2 2551 2625 -647 2400 65 23 10 chr17 35470920 35471226 -54033327 - AluY SINE Alu -1 310 1 301 334 122 30 chr17 35471226 35471638 -54032915 + L2 LINE L2 2625 3084 -188 186 313 0 45 chr17 35471662 35471729 -54032824 + L2 LINE L2 3250 3313 0 471 302 88 0 chr17 35471751 35471956 -54032597 + MIR SINE MIR 34 256 -6 525 167 0 0 chr17 35472048 35472198 -54032355 + (TA)n Simple_repeat Simple_repeat 1 150 0 280 301 8 65 chr17 35472660 35472783 -54031770 - MIR3 SINE MIR -8 200 85 241 306 81 9 chr17 35472912 35473023 -54031530 + L2 LINE L2 3191 3309 -4 196 227 155 62 chr17 35473205 35473302 -54031251 + MIR SINE MIR 31 136 -126 264 309 106 24 chr17 35474193 35474316 -54030237 - L2 LINE L2 -2 3270 3138 679 229 51 62 chr17 35474634 35474909 -54029644 + L1ME3A LINE L1 5690 5961 -209 448 274 71 42 chr17 35475853 35476021 -54028532 - MIR SINE MIR -88 174 2 303 254 59 51 chr17 35478498 35478616 -54025937 + L2 LINE L2 3195 3313 0 45135 36 2 4 chr17 35478620 35484784 -54019769 + L1PA3 LINE L1 1 6155 0 490 290 86 41 chr17 35484927 35485148 -54019405 + MIR SINE MIR 20 250 -12 218 315 81 30 chr17 35485592 35485789 -54018764 - L2 LINE L2 -160 3112 2906 334 295 0 0 chr17 35485956 35486051 -54018502 - MIR SINE MIR -109 153 59 375 309 77 6 chr17 35486534 35486702 -54017851 - MER5A DNA MER1_type -3 186 7 223 320 57 41 chr17 35486999 35487121 -54017432 + MIR3 SINE MIR 66 189 -19 238 333 59 0 chr17 35487494 35487596 -54016957 - MER91C DNA MER1_type -32 108 1 352 250 68 0 chr17 35488041 35488129 -54016424 - MER96 DNA MER1_type? -80 95 2 517 342 82 46 chr17 35488132 35488770 -54015783 - L2 LINE L2 -17 3255 2600 282 353 81 41 chr17 35489484 35489804 -54014749 - L2 LINE L2 -21 3251 2919 340 276 29 22 chr17 35490653 35490814 -54013739 + MIR SINE MIR 11 162 -46 2317 91 3 7 chr17 35491501 35491808 -54012745 + AluSq SINE Alu 1 306 -7 1208 131 11 0 chr17 35491811 35491987 -54012566 + AluSg/x SINE Alu 135 312 0 344 263 183 0 chr17 35491994 35492184 -54012369 - L2 LINE L2 -297 3016 2795 265 315 0 11 chr17 35492393 35492485 -54012068 - MIR SINE MIR -70 138 48 2348 107 3 0 chr17 35492721 35493031 -54011522 + AluSx SINE Alu 1 311 -1 182 291 137 8 chr17 35493411 35493528 -54011025 + MIR SINE MIR 96 227 -35 846 197 6 11 chr17 35493569 35493747 -54010806 - MER5A DNA MER1_type 0 189 13 664 197 0 33 chr17 35494424 35494546 -54010007 + MER58A DNA MER1_type 1 118 0 481 253 0 0 chr17 35494588 35494687 -54009866 + MER58A DNA MER1_type 125 223 -1 435 299 111 11 chr17 35494936 35495287 -54009266 + L1ME4a LINE L1 5726 6111 -10 302 217 142 19 chr17 35495330 35495436 -54009117 + MIR SINE MIR 58 176 -86 2252 106 7 0 chr17 35495965 35496258 -54008295 - AluSx SINE Alu -17 295 1 274 362 26 13 chr17 35497816 35497968 -54006585 - MIR SINE MIR -89 173 20 824 176 25 18 chr17 35498364 35498622 -54005931 + GA-rich Low_complexity Low_complexity 1 259 0 648 279 18 0 chr17 35498623 35498788 -54005765 + MER63A DNA MER1_type 39 206 -4 560 287 19 0 chr17 35499171 35499328 -54005225 - MIR3 SINE MIR -16 192 33 280 240 42 52 chr17 35499416 35499512 -54005041 - MER81 DNA DNA 0 114 20 375 268 45 36 chr17 35500004 35500186 -54004367 - L1ME4a LINE L1 -225 5896 5710 351 311 106 61 chr17 35500189 35500501 -54004052 - L1ME4a LINE L1 -442 5679 5354 767 238 0 17 chr17 35501314 35501495 -54003058 - MER5B DNA MER1_type 0 178 1 453 296 33 21 chr17 35501698 35501938 -54002615 + MIR SINE MIR 14 256 -6 15562 199 32 6 chr17 35502284 35508811 -53995742 - L1PB1 LINE L1 0 6867 6 436 324 84 0 chr17 35508827 35509006 -53995547 + MIR SINE MIR 54 247 -15 228 363 52 36 chr17 35510372 35510565 -53993988 + L2 LINE L2 2861 3056 -216 210 118 0 0 chr17 35510711 35510745 -53993808 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 512 274 61 12 chr17 35511269 35511433 -53993120 - MER117 DNA MER1_type -24 173 2 497 295 98 26 chr17 35511660 35511894 -53992659 + L2 LINE L2 2430 2680 -634 1604 198 149 30 chr17 35511911 35512382 -53992171 + L1ME2 LINE L1 5628 6154 -10 330 217 36 58 chr17 35512423 35512561 -53991992 + L1MC5 LINE L1 7783 7917 -44 294 378 29 18 chr17 35512570 35512882 -53991671 + L2 LINE L2 2698 3015 -257 199 362 29 9 chr17 35512908 35513013 -53991540 + L2 LINE L2 3163 3269 -44 650 273 19 57 chr17 35514027 35514291 -53990262 + MIR SINE MIR 9 262 0 211 322 0 0 chr17 35514829 35514888 -53989665 + GA-rich Low_complexity Low_complexity 3 61 0 2299 103 0 7 chr17 35514892 35515192 -53989361 + AluSq SINE Alu 1 298 -15 299 192 13 0 chr17 35515689 35515767 -53988786 + (TGAA)n Simple_repeat Simple_repeat 1 79 0 234 81 0 0 chr17 35515908 35515945 -53988608 + (TC)n Simple_repeat Simple_repeat 1 37 0 312 27 0 0 chr17 35515945 35515982 -53988571 + (TG)n Simple_repeat Simple_repeat 2 38 0 295 263 38 53 chr17 35516355 35516488 -53988065 - MIR SINE MIR -118 144 14 1569 188 22 7 chr17 35518484 35518783 -53985770 - AluJb SINE Alu 0 305 3 347 276 57 0 chr17 35519130 35519235 -53985318 - MIR SINE MIR -123 139 29 267 366 42 10 chr17 35519469 35519807 -53984746 + L3 LINE CR1 1069 1459 -118 212 362 43 0 chr17 35519901 35519995 -53984558 + L2 LINE L2 3175 3272 -41 1051 220 33 4 chr17 35520012 35520257 -53984296 - MLT1H LTR MaLR -293 256 5 216 0 0 0 chr17 35520264 35520288 -53984265 + (T)n Simple_repeat Simple_repeat 1 24 0 282 286 124 0 chr17 35520459 35520564 -53983989 + L2 LINE L2 3155 3272 0 448 283 94 26 chr17 35520636 35520869 -53983684 + MIR SINE MIR 13 261 -1 896 302 122 21 chr17 35521487 35521961 -53982592 - MLT1H1 LTR MaLR 0 555 34 336 331 23 8 chr17 35522148 35522278 -53982275 - MIR3 SINE MIR -54 154 23 190 289 133 11 chr17 35522804 35522894 -53981659 + L2 LINE L2 3153 3253 -19 348 24 0 0 chr17 35523645 35523686 -53980867 + (TG)n Simple_repeat Simple_repeat 1 41 0 1371 305 21 14 chr17 35524481 35524963 -53979590 - L1ME3A LINE L1 -7 6163 5679 2255 249 57 27 chr17 35525096 35525898 -53978655 - L1ME1 LINE L1 -47 6119 5338 220 276 90 8 chr17 35526141 35526275 -53978278 - MIR SINE MIR -44 218 74 181 259 0 69 chr17 35526640 35526698 -53977855 + L2 LINE L2 3230 3283 -30 380 289 0 0 chr17 35526803 35526917 -53977636 + MIR SINE MIR 78 191 -71 208 336 69 8 chr17 35527166 35527297 -53977256 + MIR SINE MIR 63 201 -61 240 313 0 0 chr17 35527314 35527397 -53977156 + C-rich Low_complexity Low_complexity 1 83 0 39 22 0 0 chr17 35527641 35527687 -53976866 + GC_rich Low_complexity Low_complexity 1 46 0 30 0 0 0 chr17 35531227 35531257 -53973296 + AT_rich Low_complexity Low_complexity 1 30 0 28961 38 4 5 chr17 35531257 35535531 -53969022 - L1PA4 LINE L1 0 6155 1887 944 182 13 0 chr17 35736849 35737008 -53767545 + AluJo/FRAM SINE Alu 139 299 -13 209 226 43 11 chr17 35737072 35737165 -53767388 + (TA)n Simple_repeat Simple_repeat 2 97 0 269 221 192 17 chr17 35737178 35737350 -53767203 - L1M4 LINE L1 -3477 2669 2468 2404 71 0 19 chr17 35737350 35737661 -53766892 - AluY SINE Alu -6 305 1 2085 84 4 0 chr17 35737780 35738041 -53766512 - AluSc SINE Alu -9 300 39 573 101 0 0 chr17 35738153 35738232 -53766321 - AluSg/x SINE Alu -15 294 216 234 0 0 0 chr17 35738661 35738687 -53765866 + (CA)n Simple_repeat Simple_repeat 2 27 0 182 154 0 77 chr17 35738687 35738778 -53765775 + (TA)n Simple_repeat Simple_repeat 1 84 0 237 154 15 31 chr17 35738841 35738906 -53765647 + (TA)n Simple_repeat Simple_repeat 1 64 0 2242 101 7 0 chr17 35739377 35739675 -53764878 - AluSp SINE Alu -13 300 1 1893 132 15 0 chr17 35739686 35739959 -53764594 - AluSc SINE Alu -14 295 19 2160 135 0 0 chr17 35740115 35740411 -53764142 - AluSx SINE Alu -14 298 3 1808 168 25 0 chr17 35741098 35741383 -53763170 + AluJb SINE Alu 1 292 -20 509 271 163 35 chr17 35742021 35742224 -53762329 + MIR SINE MIR 15 243 -19 2396 97 3 0 chr17 35743122 35743431 -53761122 + AluSg SINE Alu 1 310 0 696 216 25 10 chr17 35743433 35743632 -53760921 + LOR1-int LTR ERV1 1839 2040 -6080 944 189 39 43 chr17 35743641 35743874 -53760679 - MER50 LTR ERV1 -1 733 502 2247 112 6 6 chr17 35743907 35744220 -53760333 + AluSq SINE Alu 1 313 0 435 188 58 70 chr17 35744233 35744355 -53760198 + L1ME LINE L1 5315 5437 -725 1728 96 112 0 chr17 35744355 35744660 -53759893 + AluSg SINE Alu 1 333 0 435 188 58 70 chr17 35744660 35744721 -53759832 + L1ME LINE L1 5437 5497 -665 1928 91 12 0 chr17 35745102 35745354 -53759199 + AluSx SINE Alu 1 255 -57 1265 273 75 0 chr17 35745395 35745850 -53758703 - L1ME LINE L1 -348 5816 5328 5320 168 27 8 chr17 35745861 35747843 -53756710 - L1PB3 LINE L1 -10 6144 4122 897 267 50 28 chr17 35747839 35748341 -53756212 - L1ME LINE L1 -804 5342 4830 * 1357 231 12 80 chr17 35748356 35748845 -53755708 + MLT2B1 LTR ERVL 2 457 -63 198 0 0 0 chr17 35748852 35748874 -53755679 + (TC)n Simple_repeat Simple_repeat 2 23 0 195 114 0 0 chr17 35748874 35748909 -53755644 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 649 268 20 0 chr17 35749018 35749216 -53755337 - L1ME LINE L1 -1300 4846 4645 12057 211 25 15 chr17 35749238 35751885 -53752668 + L1PA15 LINE L1 2027 4709 -1456 232 27 54 0 chr17 35751885 35751922 -53752631 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 12057 211 25 15 chr17 35751922 35753007 -53751546 + L1PA15 LINE L1 4709 5783 -382 420 111 0 0 chr17 35753010 35753082 -53751471 + L1PA8 LINE L1 3288 3359 -2787 13228 110 11 7 chr17 35753183 35753240 -53751313 + L1PA8 LINE L1 3341 3396 -2776 2084 129 3 10 chr17 35753240 35753542 -53751011 + AluSq SINE Alu 6 305 -8 13228 110 11 7 chr17 35753542 35756344 -53748209 + L1PA8 LINE L1 3396 6163 -9 2142 193 0 2 chr17 35756353 35756746 -53747807 + L1PA15 LINE L1 5769 6160 -5 1387 210 93 21 chr17 35756753 35756791 -53747762 - L1ME LINE L1 -1526 4620 4586 2051 86 15 55 chr17 35756791 35757116 -53747437 - L1PA13 LINE L1 -3 6160 5849 1387 210 93 21 chr17 35757116 35757591 -53746962 - L1ME LINE L1 -1560 4586 4070 810 273 54 13 chr17 35757730 35758118 -53746435 + L1ME LINE L1 2607 3010 -3136 2319 82 7 0 chr17 35758122 35758415 -53746138 + AluSq SINE Alu 1 295 -18 819 40 0 0 chr17 35759183 35759282 -53745271 + SVA Other Other 1286 1384 -2 222 62 0 0 chr17 35759521 35759553 -53745000 + (CA)n Simple_repeat Simple_repeat 2 33 0 3083 277 70 43 chr17 35760179 35762581 -53741972 + L1ME LINE L1 2995 5462 -702 2827 52 0 0 chr17 35762581 35762927 -53741626 - L1PA7 LINE L1 -4 6150 5805 3083 277 70 43 chr17 35762927 35762990 -53741563 + L1ME LINE L1 5462 5522 -642 213 132 0 0 chr17 35763007 35763045 -53741508 + (CA)n Simple_repeat Simple_repeat 1 38 0 3105 211 94 90 chr17 35763093 35763990 -53740563 - L1MC4 LINE L1 -140 7902 6995 2049 139 0 7 chr17 35763990 35764292 -53740261 - AluSx SINE Alu -12 300 1 3105 211 94 90 chr17 35764292 35764832 -53739721 - L1MC4 LINE L1 -1047 6995 6459 9970 121 41 19 chr17 35765148 35767639 -53736914 + L1PBa LINE L1 1321 3863 -2999 358 167 0 0 chr17 35769071 35769137 -53735416 - MLT1A1 LTR MaLR 0 365 300 27 49 0 0 chr17 35769359 35769400 -53735153 + AT_rich Low_complexity Low_complexity 1 41 0 30 69 0 0 chr17 35769685 35769743 -53734810 + AT_rich Low_complexity Low_complexity 1 58 0 1205 192 19 15 chr17 35772089 35772350 -53732203 - L1MC2 LINE L1 -266 6078 5817 1777 162 74 8 chr17 35772374 35772768 -53731785 - L1MB2 LINE L1 -3 6168 5749 * 4049 226 28 19 chr17 35772765 35773954 -53730599 - L1MB2 LINE L1 -1323 4823 3624 466 168 47 9 chr17 35773954 35774061 -53730492 - LTR56 LTR ERV1 -138 307 197 346 341 78 26 chr17 35774125 35774395 -53730158 - L1ME4a LINE L1 -266 5855 5572 400 222 104 52 chr17 35774481 35774693 -53729860 + L1ME3 LINE L1 5937 6159 -3 353 336 32 24 chr17 35775264 35775389 -53729164 + MIR3 SINE MIR 30 155 -53 361 298 54 12 chr17 35775396 35775564 -53728989 + MER117 DNA MER1_type 3 177 -20 258 360 93 7 chr17 35776684 35776823 -53727730 - MIR3 SINE MIR -2 206 56 208 283 40 105 chr17 35776971 35777123 -53727430 + MER5A DNA MER1_type 36 177 -1 407 279 18 9 chr17 35777124 35777235 -53727318 - MIR3 SINE MIR -48 160 49 728 277 45 4 chr17 35778219 35778461 -53726092 - MLT1I LTR MaLR -155 254 3 848 133 0 0 chr17 35779421 35779541 -53725012 - FLAM_C SINE Alu -12 121 2 584 225 27 0 chr17 35779932 35780043 -53724510 - MER81 DNA DNA 0 114 1 204 241 0 0 chr17 35780128 35780186 -53724367 + (TA)n Simple_repeat Simple_repeat 1 58 0 261 297 52 19 chr17 35780187 35780399 -53724154 - L1ME4a LINE L1 -158 5963 5745 34 42 0 0 chr17 35780399 35780447 -53724106 + AT_rich Low_complexity Low_complexity 1 48 0 2000 114 29 4 chr17 35780592 35780873 -53723680 + AluSx SINE Alu 1 288 -24 776 279 54 41 chr17 35781111 35781427 -53723126 + MLT1E2 LTR MaLR 81 400 -226 31 0 0 0 chr17 35781647 35781678 -53722875 + AT_rich Low_complexity Low_complexity 1 31 0 184 0 30 61 chr17 35782397 35782430 -53722123 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 471 96 14 0 chr17 35782914 35782987 -53721566 + MER66B LTR ERV1 413 486 0 614 223 40 0 chr17 35783993 35784141 -53720412 - MIR SINE MIR 0 262 109 186 280 238 21 chr17 35785871 35786014 -53718539 - MIR3 SINE MIR -2 206 33 207 202 75 106 chr17 35786179 35786273 -53718280 - MIR3 SINE MIR -28 180 90 728 305 51 27 chr17 35787302 35787558 -53716995 + MIR SINE MIR 1 262 0 249 333 111 16 chr17 35788154 35788280 -53716273 + MIR SINE MIR 49 186 -76 1821 160 0 19 chr17 35788293 35788600 -53715953 + AluJb SINE Alu 11 311 -1 208 289 10 62 chr17 35788684 35788781 -53715772 - MIR SINE MIR -67 141 56 195 375 0 0 chr17 35789423 35789503 -53715050 + MIR SINE MIR 61 140 -122 190 53 132 0 chr17 35789887 35789925 -53714628 - L2 LINE L2 -348 2966 2924 180 414 145 0 chr17 35790063 35790208 -53714345 + L2 LINE L2 3107 3272 0 21 0 0 0 chr17 35790586 35790607 -53713946 + GC_rich Low_complexity Low_complexity 1 21 0 278 268 14 0 chr17 35790818 35790889 -53713664 - MIR SINE MIR -24 238 167 219 204 0 0 chr17 35791712 35791766 -53712787 + (TG)n Simple_repeat Simple_repeat 2 55 0 318 364 16 16 chr17 35793997 35794126 -53710427 + L2 LINE L2 3138 3266 -6 258 303 151 3 chr17 35794383 35794521 -53710032 - MIR3 SINE MIR -72 136 7 1397 184 14 14 chr17 35796661 35796944 -53707609 + MLT1-int LTR MaLR 329 611 -760 908 195 21 3 chr17 35797071 35797265 -53707288 - MIR SINE MIR -56 206 14 516 265 169 0 chr17 35797266 35797402 -53707151 + MER5A DNA MER1_type 31 189 0 633 301 45 81 chr17 35797764 35798099 -53706454 + L2 LINE L2 2948 3270 -2 195 396 40 7 chr17 35801524 35801673 -53702880 + L2 LINE L2 2896 3049 -223 899 320 153 9 chr17 35802764 35803229 -53701324 - L3 LINE CR1 -65 1512 981 342 0 0 0 chr17 35803620 35803658 -53700895 + (CA)n Simple_repeat Simple_repeat 2 39 0 200 220 231 66 chr17 35803698 35803789 -53700764 + MIR3 SINE MIR 102 207 -1 284 349 9 9 chr17 35803857 35803963 -53700590 - MIR SINE MIR -113 149 44 31 58 0 0 chr17 35804290 35804342 -53700211 + GC_rich Low_complexity Low_complexity 1 52 0 277 307 40 20 chr17 35805307 35805408 -53699145 + MIR SINE MIR 112 214 -48 269 340 0 0 chr17 35805442 35805536 -53699017 - MIR SINE MIR -29 233 140 313 338 23 23 chr17 35805577 35805710 -53698843 - MIR SINE MIR -55 153 21 284 336 38 24 chr17 35806420 35806631 -53697922 + L2 LINE L2 2836 3049 -223 245 279 107 41 chr17 35807387 35807509 -53697044 + MIR SINE MIR 52 181 -81 855 273 53 43 chr17 35808009 35808426 -53696127 + L2 LINE L2 2892 3312 -1 291 278 87 0 chr17 35808406 35808521 -53696032 + L3 LINE CR1 1355 1479 -98 * 181 328 31 16 chr17 35808571 35808635 -53695918 - MIR SINE MIR -66 142 78 276 313 32 0 chr17 35808791 35808891 -53695662 + MIR SINE MIR 44 146 -77 207 0 0 0 chr17 35809286 35809309 -53695244 + (CA)n Simple_repeat Simple_repeat 2 24 0 2344 148 51 5 chr17 35809582 35809955 -53694598 + MLT1B LTR MaLR 1 390 0 182 204 68 23 chr17 35809967 35810011 -53694542 + MIR SINE MIR 103 148 -60 195 328 30 0 chr17 35811368 35811435 -53693118 + MER5B DNA MER1_type 75 143 -35 202 259 17 17 chr17 35811558 35811616 -53692937 + L2 LINE L2 3248 3305 -8 234 0 0 0 chr17 35811620 35811646 -53692907 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 212 210 48 32 chr17 35811854 35811916 -53692637 + L2 LINE L2 3243 3305 -8 216 0 0 0 chr17 35811918 35811942 -53692611 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 287 250 56 62 chr17 35812168 35812312 -53692241 + MIR3 SINE MIR 21 163 -45 1482 234 99 34 chr17 35812397 35812594 -53691959 + L1ME4a LINE L1 5486 5669 -452 1879 141 26 7 chr17 35812594 35812898 -53691655 + AluJo SINE Alu 1 310 -2 1482 234 99 34 chr17 35812898 35813297 -53691256 + L1ME4a LINE L1 5669 6121 0 680 219 101 48 chr17 35813379 35813590 -53690963 + MIR SINE MIR 20 245 -17 303 28 0 0 chr17 35813590 35813626 -53690927 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 680 219 101 48 chr17 35813626 35813642 -53690911 + MIR SINE MIR 245 259 -3 373 306 0 28 chr17 35813828 35813936 -53690617 + MIR SINE MIR 42 146 -62 495 312 98 29 chr17 35814091 35814264 -53690289 + MER91A DNA MER1_type 1 185 -11 619 275 14 55 chr17 35815049 35815267 -53689286 + MIR SINE MIR 51 259 -3 289 323 71 0 chr17 35815430 35815529 -53689024 + L2 LINE L2 3208 3313 0 315 0 0 0 chr17 35815573 35815608 -53688945 + (CA)n Simple_repeat Simple_repeat 2 36 0 272 234 64 21 chr17 35815979 35816073 -53688480 - MIR SINE MIR -86 122 25 206 376 8 8 chr17 35817442 35817575 -53686978 + GA-rich Low_complexity Low_complexity 2 134 0 309 26 0 0 chr17 35817913 35817951 -53686602 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 0 0 0 chr17 35817951 35817973 -53686580 + (GA)n Simple_repeat Simple_repeat 2 23 0 205 379 118 25 chr17 35818154 35818315 -53686238 - MIR SINE MIR -8 254 79 309 301 54 25 chr17 35818472 35818663 -53685890 - MIR SINE MIR -41 221 21 373 247 215 0 chr17 35819094 35819187 -53685366 - MER81 DNA DNA 0 114 2 339 288 63 9 chr17 35819339 35819450 -53685103 + MIR SINE MIR 96 212 -50 403 223 48 10 chr17 35819642 35819745 -53684808 - MIR3 SINE MIR -21 187 81 287 238 12 0 chr17 35819926 35820006 -53684547 + L2 LINE L2 2909 2989 -283 2759 147 33 0 chr17 35820058 35820540 -53684013 + MER41E LTR ERV1 15 512 0 386 367 45 41 chr17 35820567 35820812 -53683741 + L2 LINE L2 3027 3272 0 383 307 114 18 chr17 35820797 35820963 -53683590 - L2 LINE L2 -4 3309 3128 * 2213 252 37 74 chr17 35822841 35823681 -53680872 + MER21B LTR ERV1 1 809 -54 223 311 95 74 chr17 35823737 35823927 -53680626 + L2 LINE L2 3069 3262 -10 * 593 313 78 21 chr17 35823921 35824164 -53680389 + L3 LINE CR1 1314 1570 -7 208 319 0 14 chr17 35824198 35824270 -53680283 + GA-rich Low_complexity Low_complexity 1 71 0 302 283 214 13 chr17 35824548 35824707 -53679846 + MIR3 SINE MIR 3 193 -15 2328 93 0 6 chr17 35824751 35825063 -53679490 - AluSq SINE Alu -3 310 1 303 207 54 34 chr17 35825347 35825476 -53679077 + MLT1H LTR MaLR 369 448 -2 637 300 123 18 chr17 35826107 35826334 -53678219 + MIR SINE MIR 12 262 0 257 327 87 74 chr17 35826565 35826874 -53677679 - L2 LINE L2 -448 2866 2554 443 225 243 40 chr17 35826890 35827063 -53677490 + MIR SINE MIR 30 237 -25 243 239 0 45 chr17 35827736 35827803 -53676750 + MIR3 SINE MIR 118 181 -27 275 337 0 11 chr17 35828670 35828765 -53675788 - MIR3 SINE MIR -17 191 98 192 215 224 47 chr17 35829126 35829233 -53675320 + MIR SINE MIR 20 145 -63 333 0 0 0 chr17 35830662 35830699 -53673854 + (CA)n Simple_repeat Simple_repeat 1 37 0 217 175 0 0 chr17 35830887 35830927 -53673626 - L2 LINE L2 -4 3309 3270 268 288 25 0 chr17 35831196 35831276 -53673277 - MER5A DNA MER1_type -36 153 72 314 269 192 0 chr17 35831337 35831441 -53673112 + MER5B DNA MER1_type 2 125 -53 208 93 0 47 chr17 35831441 35831484 -53673069 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 217 97 0 0 chr17 35831488 35831519 -53673034 + MER5B DNA MER1_type 148 178 0 434 272 29 69 chr17 35833099 35833272 -53671281 - MIR3 SINE MIR -13 195 30 260 158 0 88 chr17 35833607 35833664 -53670889 + L2 LINE L2 3262 3313 0 222 118 0 0 chr17 35834238 35834272 -53670281 + (T)n Simple_repeat Simple_repeat 1 34 0 363 292 97 0 chr17 35834713 35834857 -53669696 + MIR SINE MIR 47 204 -58 213 39 0 0 chr17 35835053 35835079 -53669474 + (TG)n Simple_repeat Simple_repeat 1 26 0 308 303 191 25 chr17 35835394 35835556 -53668997 + MIR3 SINE MIR 19 207 -1 367 276 202 20 chr17 35835741 35835944 -53668609 - MIR SINE MIR -14 248 9 214 333 97 0 chr17 35836163 35836235 -53668318 + L2 LINE L2 3173 3251 -21 1377 161 77 42 chr17 35836238 35836524 -53668029 + AluJo SINE Alu 15 310 -2 930 228 5 5 chr17 35836538 35836735 -53667818 - MIR SINE MIR 0 262 66 767 244 196 36 chr17 35836871 35837426 -53667127 - L2 LINE L2 0 3313 2643 729 202 17 34 chr17 35837667 35837845 -53666708 + MER33 DNA MER1_type 1 175 -149 720 165 30 15 chr17 35837867 35838000 -53666553 - AluJb SINE Alu -176 136 2 708 192 32 0 chr17 35838002 35838158 -53666395 + MER33 DNA MER1_type 203 363 0 240 319 133 24 chr17 35838377 35838543 -53666010 - MIR SINE MIR -1 261 78 186 301 27 14 chr17 35839228 35839301 -53665252 - MIR SINE MIR -111 151 78 1554 199 3 30 chr17 35839517 35839818 -53664735 + AluJo SINE Alu 3 295 -17 186 308 192 0 chr17 35840045 35840123 -53664430 - MIR SINE MIR -122 140 48 216 281 0 62 chr17 35840872 35840936 -53663617 + L2 LINE L2 3204 3263 -9 559 218 54 172 chr17 35841802 35842092 -53662461 + L2 LINE L2 2851 3055 -258 2133 103 0 40 chr17 35842092 35842393 -53662160 + AluSx SINE Alu 21 309 -3 559 218 54 172 chr17 35842393 35842620 -53661933 + L2 LINE L2 3055 3307 -6 396 360 82 30 chr17 35842660 35843027 -53661526 - L2 LINE L2 0 3272 2887 242 272 97 9 chr17 35844127 35844241 -53660312 + L3b LINE CR1 1263 1386 -197 189 0 0 0 chr17 35844823 35844844 -53659709 + (CA)n Simple_repeat Simple_repeat 2 22 0 409 329 40 0 chr17 35845053 35845205 -53659348 - MIR3 SINE MIR -10 198 41 191 235 104 52 chr17 35845505 35845620 -53658933 + MIR3 SINE MIR 47 167 -41 193 143 0 0 chr17 35846505 35846533 -53658020 - L2 LINE L2 -24 3248 3221 352 315 100 0 chr17 35846749 35846879 -53657674 - L2 LINE L2 -213 3059 2917 228 265 15 0 chr17 35847382 35847450 -53657103 - MIR SINE MIR -111 97 29 25 31 0 0 chr17 35849346 35849378 -53655175 + GC_rich Low_complexity Low_complexity 1 32 0 26 50 0 0 chr17 35849530 35849570 -53654983 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr17 35850012 35850033 -53654520 + GC_rich Low_complexity Low_complexity 1 21 0 306 308 0 0 chr17 35853532 35853610 -53650943 - L2 LINE L2 -56 3257 3180 252 315 11 0 chr17 35854619 35854708 -53649845 - MIR3 SINE MIR -2 206 117 804 290 16 16 chr17 35854880 35855125 -53649428 - MIR SINE MIR -2 260 16 1699 211 5 19 chr17 35855641 35856015 -53648538 - MLT1B LTR MaLR 0 390 22 304 257 19 57 chr17 35856020 35856053 -53648500 + MER94 DNA DNA 34 67 -67 953 54 78 0 chr17 35856053 35856182 -53648371 + MER85 DNA T2_type 1 139 0 304 257 19 57 chr17 35856182 35856253 -53648300 + MER94 DNA DNA 67 134 0 318 372 51 20 chr17 35856255 35856451 -53648102 + MIR SINE MIR 58 259 -3 1134 299 71 47 chr17 35856461 35856984 -53647569 + L2 LINE L2 2773 3309 -4 382 248 0 28 chr17 35857723 35857832 -53646721 - MIR3 SINE MIR -52 156 51 205 353 126 0 chr17 35858196 35858315 -53646238 + L2 LINE L2 3180 3313 0 * 386 296 69 113 chr17 35858314 35858766 -53645787 - L2 LINE L2 -21 3251 2820 247 180 22 67 chr17 35859317 35859406 -53645147 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 349 301 77 13 chr17 35859749 35859905 -53644648 - MIR3 SINE MIR -10 198 33 210 389 22 54 chr17 35860230 35860310 -53644243 + L2 LINE L2 3135 3216 -97 2261 128 59 20 chr17 35860310 35860718 -53643835 + MSTB LTR MaLR 1 424 -2 210 389 22 54 chr17 35860718 35860822 -53643731 + L2 LINE L2 3216 3313 0 430 291 34 39 chr17 35860889 35861068 -53643485 - MIR SINE MIR -70 192 15 862 242 142 5 chr17 35861361 35861580 -53642973 + MIR SINE MIR 14 262 0 349 280 177 34 chr17 35862305 35862480 -53642073 - MIR SINE MIR -32 230 31 479 244 0 17 chr17 35864425 35864605 -53639948 + (CACCAT)n Simple_repeat Simple_repeat 4 180 0 361 310 9 0 chr17 35864610 35864723 -53639830 + (CAT)n Simple_repeat Simple_repeat 3 116 0 365 276 0 6 chr17 35864739 35864913 -53639640 + (CAT)n Simple_repeat Simple_repeat 1 173 0 372 216 0 62 chr17 35865011 35865108 -53639445 - MIR SINE MIR -92 170 80 338 358 40 0 chr17 35865272 35865423 -53639130 + MIR3 SINE MIR 41 197 -11 251 239 22 56 chr17 35865430 35865610 -53638943 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 181 360 79 0 chr17 35866425 35866539 -53638014 + L2 LINE L2 2694 2816 -498 421 344 117 40 chr17 35867005 35867432 -53637121 + L2 LINE L2 2813 3272 0 188 366 40 46 chr17 35867419 35867722 -53636831 - L2 LINE L2 -874 2440 2140 * 443 285 113 14 chr17 35868169 35868390 -53636163 - MIR SINE MIR 0 262 20 603 266 124 35 chr17 35868530 35868902 -53635651 + MLT1I LTR MaLR 1 405 -4 727 279 8 8 chr17 35869237 35869485 -53635068 + MIR SINE MIR 15 261 -1 768 200 0 0 chr17 35869498 35869678 -53634875 + (CAT)n Simple_repeat Simple_repeat 1 180 0 326 264 20 40 chr17 35869703 35869852 -53634701 + MIR SINE MIR 60 203 -59 * 335 261 24 23 chr17 35869816 35869994 -53634559 - MIR SINE MIR -1 261 5 844 103 63 11 chr17 35869997 35870171 -53634382 + Tigger3(Golem) DNA MER2_type 2429 2611 -418 19164 119 18 4 chr17 35870353 35873338 -53631215 - Tigger3(Golem) DNA MER2_type 0 3029 1 492 48 0 0 chr17 35873582 35873645 -53630908 + (TG)n Simple_repeat Simple_repeat 1 63 0 219 36 0 0 chr17 35873644 35873672 -53630881 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 276 281 9 18 chr17 35873706 35873820 -53630733 + (TG)n Simple_repeat Simple_repeat 2 114 0 221 132 0 19 chr17 35874766 35874819 -53629734 + (CAGAGA)n Simple_repeat Simple_repeat 4 55 0 622 217 51 0 chr17 35875452 35875590 -53628963 - MIR SINE MIR -80 182 38 374 308 31 1 chr17 35876285 35876423 -53628130 + MIR SINE MIR 20 159 -51 402 281 65 81 chr17 35876672 35876857 -53627696 + MIR3 SINE MIR 27 208 0 225 94 0 0 chr17 35877563 35877595 -53626958 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 209 302 0 0 chr17 35877597 35877650 -53626903 - L2 LINE L2 -7 3306 3254 330 291 55 24 chr17 35877688 35877853 -53626700 - L2 LINE L2 -166 3106 2937 212 246 35 0 chr17 35877920 35877977 -53626576 - L2 LINE L2 -15 3298 3240 * 418 238 133 0 chr17 35877975 35878080 -53626473 + MIR SINE MIR 117 235 -27 338 332 71 22 chr17 35878440 35878752 -53625801 + L2 LINE L2 2734 3059 -213 251 155 0 20 chr17 35878792 35878842 -53625711 - HsTC2 DNA Tc2 -4 1894 53 243 61 0 0 chr17 35879006 35879039 -53625514 + (CAAT)n Simple_repeat Simple_repeat 1 33 0 976 265 114 26 chr17 35879050 35879548 -53625005 - L2 LINE L2 -49 3264 2713 218 139 481 0 chr17 35879584 35879663 -53624890 + L2 LINE L2 3153 3269 -3 237 280 139 0 chr17 35880026 35880167 -53624386 - MIR SINE MIR -36 172 10 492 154 11 0 chr17 35880367 35880458 -53624095 + MIR SINE MIR 38 129 -79 638 342 25 30 chr17 35880737 35881135 -53623418 + L2 LINE L2 2580 2975 -339 380 222 101 0 chr17 35881466 35881565 -53622988 - L2 LINE L2 -5 3308 3200 209 160 0 20 chr17 35881794 35881844 -53622709 + CT-rich Low_complexity Low_complexity 2 50 0 301 259 56 70 chr17 35882168 35882231 -53622322 + MIR3 SINE MIR 24 86 -122 1563 196 0 31 chr17 35882231 35882517 -53622036 - AluJo SINE Alu -24 288 12 301 259 56 70 chr17 35882517 35882596 -53621957 + MIR3 SINE MIR 86 164 -44 496 239 18 61 chr17 35882842 35883005 -53621548 + MIR3 SINE MIR 2 157 -51 353 314 27 38 chr17 35883837 35884022 -53620531 - MIR3 SINE MIR -1 207 25 357 297 27 0 chr17 35884464 35884575 -53619978 + MIR3 SINE MIR 9 122 -86 255 209 45 60 chr17 35884785 35884852 -53619701 + MER91C DNA MER1_type 34 99 -41 478 291 19 25 chr17 35885401 35885559 -53618994 + MIR SINE MIR 53 209 -53 277 290 137 16 chr17 35885598 35885722 -53618831 - MIR3 SINE MIR -59 149 11 2430 138 7 2 chr17 35885739 35886153 -53618400 - L1MB3 LINE L1 0 6183 5768 201 279 16 16 chr17 35886370 35886431 -53618122 - MER5A DNA MER1_type 0 189 129 382 222 7 82 chr17 35887174 35887309 -53617244 + L2 LINE L2 2943 3067 -205 185 0 0 39 chr17 35887375 35887401 -53617152 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 358 185 67 0 chr17 35888307 35888396 -53616157 - L1MD3 LINE L1 -1 7994 7726 420 250 0 0 chr17 35889468 35889552 -53615001 - MIR SINE MIR -57 151 68 467 171 45 27 chr17 35890037 35890148 -53614405 - Charlie8 DNA MER1_type -2253 164 52 826 213 98 32 chr17 35890150 35890498 -53614055 + L1MC5 LINE L1 7537 7907 -54 2271 82 0 7 chr17 35890651 35890956 -53613597 + AluSc SINE Alu 1 303 0 1268 199 0 5 chr17 35890976 35891197 -53613356 + MER58A DNA MER1_type 2 221 -3 235 175 0 0 chr17 35891506 35891546 -53613007 + MIR SINE MIR 113 152 -110 358 306 58 8 chr17 35892033 35892154 -53612399 + MIR SINE MIR 130 256 -6 2157 120 0 19 chr17 35892303 35892658 -53611895 - AluSx SINE Alu 0 312 1 1570 175 3 58 chr17 35892658 35892967 -53611586 - AluJo SINE Alu -10 302 11 1195 168 53 5 chr17 35893138 35893346 -53611207 - MER20 DNA MER1_type 0 219 2 321 140 0 0 chr17 35893458 35893515 -53611038 + (ATG)n Simple_repeat Simple_repeat 3 59 0 196 373 49 29 chr17 35893702 35893804 -53610749 - MIR SINE MIR -61 147 60 670 201 191 16 chr17 35893956 35894145 -53610408 - MIR SINE MIR -39 223 2 714 244 120 26 chr17 35894590 35894824 -53609729 + MIR SINE MIR 6 258 -4 231 270 162 27 chr17 35895028 35895139 -53609414 + MLT1K LTR MaLR 209 334 -254 282 324 0 0 chr17 35895292 35895397 -53609156 + MLT1K LTR MaLR 484 588 0 3112 178 28 29 chr17 35896172 35896824 -53607729 + L1MB8 LINE L1 5526 6176 -2 227 275 44 0 chr17 35896839 35896930 -53607623 + HAL1 LINE L1 2413 2507 0 180 0 0 0 chr17 35896960 35896980 -53607573 + (A)n Simple_repeat Simple_repeat 1 20 0 435 316 59 15 chr17 35897000 35897136 -53607417 - MIR SINE MIR -108 154 13 307 243 131 19 chr17 35897596 35897703 -53606850 + MIR SINE MIR 93 211 -51 215 347 65 0 chr17 35897983 35898107 -53606446 + L2 LINE L2 3140 3271 -1 246 204 0 0 chr17 35898108 35898152 -53606401 - MIR3 SINE MIR -14 194 151 290 252 35 80 chr17 35898366 35898498 -53606055 - MIR SINE MIR -63 145 14 248 258 32 0 chr17 35898782 35898844 -53605709 + CT-rich Low_complexity Low_complexity 2 65 0 188 226 32 65 chr17 35898953 35899015 -53605538 - L2 LINE L2 -79 3234 3175 282 337 5 76 chr17 35899513 35899697 -53604856 + L2 LINE L2 3098 3268 -4 381 131 0 0 chr17 35900447 35900508 -53604045 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 552 186 10 0 chr17 35900607 35900704 -53603849 + MER5A DNA MER1_type 9 106 -83 630 264 84 0 chr17 35900921 35901088 -53603465 - MIR SINE MIR -1 261 81 303 387 50 0 chr17 35902215 35902396 -53602157 - MIR SINE MIR 0 262 73 359 215 0 0 chr17 35903028 35903093 -53601460 - MER91 DNA MER1_type -1 139 75 215 222 0 0 chr17 35903277 35903313 -53601240 + L2 LINE L2 2987 3022 -250 320 254 76 25 chr17 35903486 35903604 -53600949 + L2 LINE L2 3185 3308 -5 516 257 85 52 chr17 35904310 35904547 -53600006 + MIR SINE MIR 8 261 -1 233 224 0 0 chr17 35904821 35904870 -53599683 + MIR SINE MIR 91 139 -123 196 262 24 0 chr17 35905449 35905500 -53599053 - MIR SINE MIR -98 164 113 194 143 0 0 chr17 35906328 35906356 -53598197 + MER5C DNA MER1_type 1 28 -296 287 326 107 55 chr17 35906670 35906980 -53597573 - L2 LINE L2 0 3272 2947 480 35 0 0 chr17 35907050 35907108 -53597445 + (GGAGA)n Simple_repeat Simple_repeat 4 61 0 670 229 279 38 chr17 35907177 35907417 -53597136 - MLT1G LTR MaLR 0 590 298 305 256 244 27 chr17 35907454 35907712 -53596841 + L2 LINE L2 2951 3264 -8 848 273 108 30 chr17 35907880 35908500 -53596053 + L2 LINE L2 2643 3313 0 267 219 268 0 chr17 35909461 35909543 -53595010 - L2 LINE L2 0 3313 3210 227 354 54 14 chr17 35909572 35909719 -53594834 - MIR SINE MIR -7 255 103 357 288 93 7 chr17 35909878 35910017 -53594536 - MIR SINE MIR -13 249 99 487 345 52 0 chr17 35910717 35910891 -53593662 - MIR3 SINE MIR -6 202 20 285 283 35 44 chr17 35910906 35911019 -53593534 + MIR SINE MIR 3 114 -148 404 280 55 48 chr17 35911305 35911478 -53593075 - MIR SINE MIR -48 160 10 288 243 27 94 chr17 35912034 35912209 -53592344 - MIR3 SINE MIR -16 192 28 469 177 2 3 chr17 35912751 35912837 -53591716 + MER5A DNA MER1_type 29 102 -76 366 311 67 8 chr17 35912899 35913033 -53591520 - MIR SINE MIR -36 172 31 519 339 62 15 chr17 35913476 35913736 -53590817 - L3 LINE CR1 -344 1233 962 335 281 46 48 chr17 35913971 35914139 -53590414 - MIR SINE MIR -62 146 31 817 303 26 4 chr17 35914741 35914975 -53589578 + MIR SINE MIR 9 247 -15 414 221 12 0 chr17 35914975 35915061 -53589492 + MIR3 SINE MIR 113 199 -9 388 243 35 38 chr17 35915197 35915361 -53589192 - MIR SINE MIR -46 216 60 656 284 233 6 chr17 35915606 35915937 -53588616 + L3 LINE CR1 981 1386 -191 746 139 64 35 chr17 35917099 35917272 -53587281 + MER53 DNA DNA 9 186 -3 426 282 16 8 chr17 35917519 35917643 -53586910 - MIR3 SINE MIR -69 139 15 470 274 252 23 chr17 35918018 35918324 -53586229 + L3 LINE CR1 1003 1378 -199 281 222 167 14 chr17 35918320 35918392 -53586161 + MIR SINE MIR 42 124 -84 * 214 293 56 153 chr17 35918821 35919162 -53585391 + L2 LINE L2 2915 3222 -50 579 305 151 4 chr17 35919179 35919458 -53585095 + L2 LINE L2 2994 3313 0 1222 281 181 8 chr17 35919507 35919981 -53584572 + MLT1K LTR MaLR 33 588 0 263 220 68 0 chr17 35920019 35920078 -53584475 + L2 LINE L2 3249 3311 -2 587 228 108 42 chr17 35920669 35920910 -53583643 - L1MC5 LINE L1 -36 7925 7669 360 64 0 0 chr17 35921182 35921229 -53583324 + (GA)n Simple_repeat Simple_repeat 2 48 0 400 253 39 65 chr17 35921260 35921414 -53583139 + MLT1G1 LTR MaLR 441 590 -5 1480 208 150 83 chr17 35921431 35922310 -53582243 - L1MC5 LINE L1 -297 7664 6727 210 267 207 22 chr17 35922786 35922921 -53581632 + MIR SINE MIR 43 202 -60 978 93 0 0 chr17 35922951 35923090 -53581463 + (TTTCC)n Simple_repeat Simple_repeat 4 142 0 783 32 0 0 chr17 35923091 35923185 -53581368 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 1871 119 45 4 chr17 35923185 35923454 -53581099 - AluJo SINE Alu -32 280 1 271 265 0 0 chr17 35923786 35923854 -53580699 - MIR SINE MIR 0 262 195 1406 264 40 18 chr17 35923861 35924357 -53580196 + L2 LINE L2 2583 3102 -211 285 288 0 0 chr17 35924367 35924440 -53580113 + L2 LINE L2 3241 3313 0 256 254 101 72 chr17 35924443 35924581 -53579972 - MIR SINE MIR -64 198 57 2617 194 91 52 chr17 35925145 35925922 -53578631 - L1ME1 LINE L1 -20 6146 5339 401 306 41 53 chr17 35926127 35926297 -53578256 - MIR3 SINE MIR -25 183 16 402 263 153 24 chr17 35927579 35927763 -53576790 + MIR SINE MIR 3 208 -54 281 389 42 6 chr17 35928047 35928214 -53576339 - MIR3 SINE MIR -6 202 30 192 158 0 0 chr17 35928586 35928624 -53575929 + (CAG)n Simple_repeat Simple_repeat 2 39 0 582 63 0 0 chr17 35928806 35928885 -53575668 + (TCCA)n Simple_repeat Simple_repeat 1 79 0 683 237 81 15 chr17 35928985 35929183 -53575370 + LTR33 LTR ERVL 1 211 -310 330 276 41 0 chr17 35929411 35929509 -53575044 + MIR SINE MIR 81 182 -80 207 336 45 18 chr17 35929505 35929615 -53574938 - MIR SINE MIR -141 121 9 * 423 245 50 14 chr17 35929986 35930125 -53574428 - MIR SINE MIR -45 217 74 196 325 218 19 chr17 35930262 35930570 -53573983 + L2 LINE L2 1589 1957 -1357 1363 255 72 14 chr17 35930576 35931210 -53573343 - L2 LINE L2 0 3313 2648 288 327 112 52 chr17 35931248 35932241 -53572312 + L2 LINE L2 2005 3104 -168 575 315 52 14 chr17 35932246 35932459 -53572094 - MIR SINE MIR -13 249 29 316 283 145 22 chr17 35932501 35932639 -53571914 + L2 LINE L2 3115 3269 -3 391 240 68 27 chr17 35933584 35933730 -53570823 - MIR3 SINE MIR -11 197 46 345 47 0 0 chr17 35934212 35934255 -53570298 + (TG)n Simple_repeat Simple_repeat 1 43 0 220 278 56 33 chr17 35935203 35935293 -53569260 - L2 LINE L2 -22 3250 3159 300 335 74 17 chr17 35935381 35935557 -53568996 - MIR3 SINE MIR -3 205 20 192 184 20 20 chr17 35935733 35935782 -53568771 - L2 LINE L2 0 3272 3224 777 241 42 51 chr17 35937141 35937377 -53567176 - MIR SINE MIR -1 261 28 197 195 73 0 chr17 35938020 35938061 -53566492 - L2 LINE L2 -19 3253 3210 422 231 19 81 chr17 35938429 35938589 -53565964 + MIR3 SINE MIR 5 154 -54 546 227 93 47 chr17 35938694 35938866 -53565687 + MIR SINE MIR 63 242 -20 186 103 0 0 chr17 35938899 35938928 -53565625 + (TCC)n Simple_repeat Simple_repeat 2 30 0 200 305 0 17 chr17 35939393 35939452 -53565101 + MIR3 SINE MIR 125 182 -26 486 295 22 0 chr17 35939698 35939837 -53564716 + MIR3 SINE MIR 44 185 -23 195 162 0 0 chr17 35940014 35940051 -53564502 + CT-rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr17 35940564 35940587 -53563966 + (TAA)n Simple_repeat Simple_repeat 1 23 0 744 245 77 34 chr17 35940588 35940821 -53563732 - MIR SINE MIR -8 254 12 437 326 64 0 chr17 35941739 35941926 -53562627 + MIR SINE MIR 46 244 -18 * 572 274 65 0 chr17 35941923 35942091 -53562462 - MIR SINE MIR -49 213 35 357 282 48 43 chr17 35942296 35942431 -53562122 + MIR SINE MIR 30 161 -60 * 360 241 60 35 chr17 35942428 35942544 -53562009 + MIR SINE MIR 18 136 -126 816 220 129 13 chr17 35942601 35942833 -53561720 + MIR SINE MIR 3 261 -1 541 237 45 56 chr17 35943772 35943970 -53560583 + MIR SINE MIR 47 242 -20 2839 159 30 40 chr17 35944761 35944825 -53559728 - L1MB2 LINE L1 0 6171 6108 2032 152 3 3 chr17 35944825 35945134 -53559419 - AluJb SINE Alu -3 309 1 2839 159 30 40 chr17 35945134 35945674 -53558879 - L1MB2 LINE L1 -63 6108 5573 319 272 19 19 chr17 35946851 35946954 -53557599 - MIR SINE MIR -109 153 51 255 252 35 47 chr17 35947092 35947231 -53557322 + MIR SINE MIR 31 162 -89 207 302 95 0 chr17 35947497 35947613 -53556940 - MIR3 SINE MIR -11 197 71 677 294 0 16 chr17 35948878 35949072 -53555481 + MIR SINE MIR 21 211 -51 252 385 47 7 chr17 35949100 35949248 -53555305 + L2 LINE L2 3106 3259 -13 201 74 0 0 chr17 35949248 35949275 -53555278 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 354 310 94 35 chr17 35949281 35949452 -53555101 + L3 LINE CR1 1395 1575 -2 205 308 187 0 chr17 35949606 35949713 -53554840 + L2 LINE L2 3146 3272 0 1871 169 3 0 chr17 35950449 35950839 -53553714 + AluJb SINE Alu 1 391 0 216 351 54 12 chr17 35950854 35951022 -53553531 - MIR3 SINE MIR -11 197 23 600 298 36 16 chr17 35952324 35952698 -53551855 - HAL1 LINE L1 -36 2471 2069 241 174 0 22 chr17 35952755 35952801 -53551752 + MLT1J1 LTR MaLR 66 110 -336 1437 283 115 27 chr17 35953007 35953745 -53550808 - HAL1 LINE L1 -452 2055 1253 379 293 131 74 chr17 35953798 35954081 -53550472 - MLT1H LTR MaLR -13 536 238 867 147 7 0 chr17 35954087 35954223 -53550330 + MER66B LTR ERV1 350 486 0 530 301 86 5 chr17 35954224 35954410 -53550143 + MIR SINE MIR 32 232 -30 199 233 0 0 chr17 35955029 35955072 -53549481 - MIR SINE MIR -61 147 105 510 247 66 18 chr17 35955586 35955752 -53548801 + MIR SINE MIR 89 262 0 393 250 44 106 chr17 35955824 35956004 -53548549 + MER5B DNA MER1_type 4 172 -6 311 273 59 31 chr17 35956341 35956513 -53548040 - MIR SINE MIR -50 158 5 244 314 29 39 chr17 35957896 35957998 -53546555 + MIR SINE MIR 41 141 -67 255 290 178 0 chr17 35958282 35958389 -53546164 + L2 LINE L2 3147 3272 0 819 280 133 11 chr17 35958511 35958797 -53545756 - MLT1I LTR MaLR -15 394 74 266 236 69 0 chr17 35958783 35958855 -53545698 - MLT1J2 LTR MaLR -276 174 98 * 399 312 21 7 chr17 35958844 35958985 -53545568 - MLT1I LTR MaLR -261 148 6 214 356 115 0 chr17 35959152 35959256 -53545297 - L2 LINE L2 -23 3290 3175 264 233 0 0 chr17 35959685 35959758 -53544795 + GA-rich Low_complexity Low_complexity 4 76 0 2113 116 55 19 chr17 35959826 35960187 -53544366 + THE1C LTR MaLR 1 374 -1 341 344 107 24 chr17 35960370 35960864 -53543689 + L2 LINE L2 2739 3272 0 214 306 48 0 chr17 35960872 35960934 -53543619 - L3 LINE CR1 -20 1557 1493 875 220 86 0 chr17 35960940 35961126 -53543427 + MER58A DNA MER1_type 1 202 -22 27 0 0 0 chr17 35961415 35961442 -53543111 + AT_rich Low_complexity Low_complexity 1 27 0 226 387 36 0 chr17 35961878 35961989 -53542564 + L3 LINE CR1 345 459 -1118 269 296 151 16 chr17 35962110 35962296 -53542257 - MIR SINE MIR -32 230 20 182 320 160 10 chr17 35962485 35962585 -53541968 + L3 LINE CR1 1083 1197 -380 186 306 86 73 chr17 35963464 35963778 -53540775 - L2 LINE L2 -410 2904 2587 988 215 25 5 chr17 35964798 35964998 -53539555 + MER63A DNA MER1_type 7 210 0 313 299 54 54 chr17 35965631 35965798 -53538755 + MIR3 SINE MIR 1 167 -41 546 195 86 23 chr17 35966681 35966855 -53537698 + L3 LINE CR1 1348 1532 -45 263 222 0 0 chr17 35966895 35966949 -53537604 + MIR SINE MIR 191 244 -18 237 329 0 0 chr17 35968814 35968893 -53535660 + MIR3 SINE MIR 81 159 -49 266 288 12 0 chr17 35968986 35969066 -53535487 - MER103 DNA DNA -75 91 11 219 236 73 0 chr17 35969535 35969590 -53534963 + MIR SINE MIR 9 67 -195 292 250 52 10 chr17 35970062 35970158 -53534395 + MIR SINE MIR 84 183 -79 189 364 13 0 chr17 35971392 35971469 -53533084 + MIR SINE MIR 76 153 -109 317 257 48 38 chr17 35972475 35972580 -53531973 - L2 LINE L2 0 3313 3208 259 274 21 21 chr17 35973499 35973594 -53530959 - MIR SINE MIR -77 131 37 391 351 87 11 chr17 35974281 35974466 -53530087 - MIR SINE MIR -44 218 20 429 288 89 16 chr17 35974635 35974826 -53529727 - MIR SINE MIR -47 215 11 347 339 42 5 chr17 35975751 35975940 -53528613 + L2 LINE L2 2671 2866 -448 284 323 51 71 chr17 35975986 35976280 -53528273 + L2 LINE L2 2931 3218 -54 489 208 149 0 chr17 35976285 35976435 -53528118 + MER5A DNA MER1_type 4 178 -11 187 298 183 10 chr17 35976691 35976795 -53527758 - MIR SINE MIR -89 173 52 244 285 76 62 chr17 35977268 35977412 -53527141 - MIR3 SINE MIR -15 193 48 651 272 10 63 chr17 35977491 35977753 -53526800 - MIR SINE MIR -2 260 11 300 274 25 76 chr17 35978357 35978514 -53526039 + MIR SINE MIR 68 216 -46 1911 277 47 46 chr17 35978677 35979529 -53525024 + L1ME LINE L1 6 858 -5212 357 169 124 22 chr17 35979529 35979618 -53524935 + L1ME LINE L1 798 895 -5175 247 320 20 61 chr17 35979619 35979766 -53524787 - MIR SINE MIR -111 151 11 1430 250 84 5 chr17 35980647 35981075 -53523478 + L1ME3A LINE L1 5706 6167 -3 201 299 63 5 chr17 35981235 35981349 -53523204 - MIR SINE MIR -61 147 41 272 289 52 52 chr17 35981524 35981659 -53522894 + MIR3 SINE MIR 60 194 -14 202 294 0 0 chr17 35981806 35981857 -53522696 - L2 LINE L2 0 3272 3222 285 322 21 42 chr17 35981987 35982130 -53522423 - L2 LINE L2 -216 3056 2917 356 267 185 15 chr17 35983009 35983144 -53521409 - MER5B DNA MER1_type -19 159 2 399 293 9 9 chr17 35983146 35983262 -53521291 + L2 LINE L2 3149 3264 -8 235 300 59 41 chr17 35983410 35983580 -53520973 - MIR SINE MIR -72 190 18 201 322 51 17 chr17 35983761 35983879 -53520674 + MIR3 SINE MIR 2 123 -85 26 0 0 0 chr17 35984790 35984816 -53519737 + AT_rich Low_complexity Low_complexity 1 26 0 186 306 0 0 chr17 35986506 35986555 -53517998 - MIR SINE MIR -69 139 91 481 312 44 39 chr17 35986756 35986961 -53517592 + MIR SINE MIR 50 255 -7 299 344 45 82 chr17 35986990 35987234 -53517319 + L2 LINE L2 2994 3228 -44 248 275 14 14 chr17 35988023 35988092 -53516461 + GA-rich Low_complexity Low_complexity 3 71 0 434 287 61 39 chr17 35988144 35988325 -53516228 + MIR SINE MIR 28 212 -50 278 261 23 11 chr17 35988583 35988671 -53515882 - MIR3 SINE MIR -52 156 68 370 317 46 62 chr17 35988805 35989064 -53515489 + MIR SINE MIR 8 262 0 645 101 0 0 chr17 35989646 35989745 -53514808 + (TCCA)n Simple_repeat Simple_repeat 4 102 0 198 339 92 73 chr17 35989776 35989994 -53514559 - L2 LINE L2 -50 3222 3001 264 30 0 0 chr17 35990486 35990519 -53514034 + (TG)n Simple_repeat Simple_repeat 1 33 0 239 0 32 0 chr17 35990518 35990549 -53514004 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 2562 70 0 0 chr17 35991384 35991686 -53512867 + AluY SINE Alu 6 307 -4 260 325 60 20 chr17 35991902 35992053 -53512500 - MIR SINE MIR -22 240 84 286 234 142 2 chr17 35992593 35992715 -53511838 - MIR SINE MIR -65 143 45 381 274 150 16 chr17 35993156 35993396 -53511157 + L2 LINE L2 2747 3018 -254 298 284 34 11 chr17 35993597 35993685 -53510868 + MIR SINE MIR 104 193 -69 198 302 63 40 chr17 35993830 35993956 -53510597 + MIR SINE MIR 46 174 -88 428 264 32 45 chr17 35994560 35994715 -53509838 + MIR SINE MIR 63 215 -47 726 273 16 5 chr17 35994752 35994946 -53509607 + MIR SINE MIR 7 202 -60 250 287 49 25 chr17 35995378 35995500 -53509053 + LTR67 LTR ERVL 428 552 -5 504 333 52 0 chr17 35995568 35995742 -53508811 + MIR SINE MIR 65 247 -15 351 248 17 44 chr17 35995996 35996186 -53508367 + GA-rich Low_complexity Low_complexity 1 184 0 238 316 105 18 chr17 35996471 35996585 -53507968 + MIR SINE MIR 47 170 -92 373 16 95 31 chr17 35998058 35998122 -53506431 + L1PA8 LINE L1 6081 6147 -7 1443 165 34 79 chr17 35998639 35998702 -53505851 - MLT1A1 LTR MaLR 0 365 301 2006 105 3 34 chr17 35998702 35999027 -53505526 + AluSq SINE Alu 1 316 0 1443 165 34 79 chr17 35999027 35999343 -53505210 - MLT1A1 LTR MaLR -64 301 2 2186 73 0 0 chr17 35999775 36000035 -53504518 - AluY SINE Alu -51 260 1 1088 203 58 120 chr17 36000248 36000647 -53503906 - MLT1A2 LTR MaLR 0 374 1 1898 285 92 47 chr17 36000935 36002005 -53502548 + L2 LINE L2 2195 3313 0 3197 197 40 36 chr17 36002005 36002759 -53501794 + L1MB7 LINE L1 5376 6135 -49 2348 94 0 19 chr17 36002759 36003068 -53501485 + AluY SINE Alu 1 303 -8 3197 197 40 36 chr17 36003068 36003116 -53501437 + L1MB7 LINE L1 6135 6181 -3 225 0 0 0 chr17 36003392 36003417 -53501136 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 502 298 42 47 chr17 36003983 36004198 -53500355 - MIR SINE MIR -18 244 31 289 200 0 125 chr17 36004966 36005046 -53499507 + MLT1I LTR MaLR 70 135 -274 244 309 144 39 chr17 36005503 36005684 -53498869 - L2 LINE L2 -177 3095 2896 23 0 0 0 chr17 36005780 36005803 -53498750 + AT_rich Low_complexity Low_complexity 1 23 0 201 260 0 41 chr17 36007305 36007378 -53497175 + CT-rich Low_complexity Low_complexity 4 73 0 1382 48 0 0 chr17 36007618 36007785 -53496768 - L1PA4 LINE L1 -5 6150 5984 2495 14 0 0 chr17 36007785 36008076 -53496477 + L1PA4 LINE L1 5683 5973 -182 886 268 71 4 chr17 36008480 36008717 -53495836 - MIR SINE MIR -1 261 9 223 342 53 18 chr17 36008717 36008831 -53495722 - MER5A DNA MER1_type 0 189 72 517 298 53 27 chr17 36009205 36009393 -53495160 + MIR SINE MIR 70 262 0 * 1012 291 4 0 chr17 36009350 36009591 -53494962 - MIR SINE MIR -5 257 16 471 257 117 40 chr17 36009781 36010003 -53494550 - L2 LINE L2 0 3313 3075 2530 224 86 40 chr17 36010015 36010857 -53493696 - L2 LINE L2 -361 2953 2074 369 277 107 124 chr17 36011044 36011179 -53493374 - L2 LINE L2 0 3272 3136 963 159 87 48 chr17 36011179 36011386 -53493167 + MER20 DNA MER1_type 1 215 -4 369 277 107 124 chr17 36011386 36011662 -53492891 - L2 LINE L2 -136 3136 2868 491 285 38 0 chr17 36012091 36012249 -53492304 + MIR3 SINE MIR 38 201 -7 303 314 29 20 chr17 36012968 36013070 -53491483 - MIR3 SINE MIR -47 161 59 449 281 38 25 chr17 36013200 36013589 -53490964 - L1ME4a LINE L1 -30 6091 5650 612 301 98 59 chr17 36013850 36014409 -53490144 - MLT1K LTR MaLR -3 585 5 723 235 37 123 chr17 36015114 36015502 -53489051 - MLT1J1 LTR MaLR -6 440 99 2315 105 0 0 chr17 36015502 36015797 -53488756 + AluSx SINE Alu 1 295 -17 723 235 37 123 chr17 36015797 36015889 -53488664 - MLT1J1 LTR MaLR -347 99 1 432 67 0 0 chr17 36017694 36017754 -53486799 + (CA)n Simple_repeat Simple_repeat 2 61 0 470 364 85 26 chr17 36018270 36018731 -53485822 - L1ME LINE L1 -355 5807 5320 272 415 0 6 chr17 36019768 36019932 -53484621 + L2 LINE L2 1045 1207 -2107 379 314 109 25 chr17 36020049 36020371 -53484182 + L2 LINE L2 1543 1891 -1423 2972 133 9 11 chr17 36020450 36021689 -53482864 - L1PA13 LINE L1 -11 6152 4842 488 198 30 10 chr17 36021856 36021957 -53482596 + MIR SINE MIR 25 127 -135 235 226 98 43 chr17 36022165 36022329 -53482224 + L2 LINE L2 2447 2619 -695 1933 153 13 7 chr17 36022399 36022700 -53481853 + AluJo SINE Alu 2 304 -8 303 296 187 60 chr17 36022760 36023108 -53481445 + L2 LINE L2 2872 3263 -9 215 312 9 55 chr17 36023352 36023461 -53481092 - L2 LINE L2 -208 3064 2961 201 74 0 0 chr17 36023853 36023880 -53480673 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2752 19 7 3 chr17 36024069 36024379 -53480174 - AluY SINE Alu 0 311 1 245 267 141 46 chr17 36024411 36024737 -53479816 + L1M4 LINE L1 2805 3161 -2985 363 284 14 68 chr17 36024768 36024916 -53479637 - MER5A DNA MER1_type 0 189 50 330 284 0 67 chr17 36024799 36024933 -53479620 + MER5A DNA MER1_type 43 167 -22 * 1948 117 81 0 chr17 36025421 36025694 -53478859 - AluSx SINE Alu -17 295 1 237 246 18 0 chr17 36025746 36025803 -53478750 + MLT1K LTR MaLR 531 588 0 2078 138 10 0 chr17 36026009 36026306 -53478247 - AluSx SINE Alu -12 300 1 301 294 49 42 chr17 36027006 36027149 -53477404 + MLT1J1 LTR MaLR 19 162 -284 372 326 44 30 chr17 36027801 36027936 -53476617 - L2 LINE L2 0 3272 3136 386 217 152 0 chr17 36028608 36028700 -53475853 + MIR SINE MIR 79 184 -78 378 270 0 17 chr17 36028700 36028815 -53475738 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 238 289 67 0 chr17 36028815 36028905 -53475648 - L1MC4 LINE L1 -1333 6709 6614 219 36 0 0 chr17 36028905 36028933 -53475620 + (TA)n Simple_repeat Simple_repeat 2 29 0 274 288 19 88 chr17 36029572 36029732 -53474821 + MER5A DNA MER1_type 21 169 -20 213 318 12 12 chr17 36029918 36030003 -53474550 - MIR SINE MIR 0 262 178 207 301 106 8 chr17 36030137 36030260 -53474293 - L2 LINE L2 -585 2729 2595 436 285 95 25 chr17 36030279 36030437 -53474116 - MIR SINE MIR -81 181 13 191 318 196 6 chr17 36030517 36030690 -53473863 - L2 LINE L2 -799 2515 2310 247 250 31 16 chr17 36030720 36030784 -53473769 - L2 LINE L2 0 3313 3249 428 218 64 18 chr17 36031304 36031414 -53473139 + MIR SINE MIR 71 185 -77 444 347 60 30 chr17 36031789 36032054 -53472499 - L1ME4a LINE L1 -125 5996 5724 770 246 148 5 chr17 36032366 36032569 -53471984 - MIR SINE MIR 0 262 31 305 354 57 19 chr17 36032559 36032717 -53471836 + MIR SINE MIR 29 192 -70 * 290 246 0 0 chr17 36033877 36033938 -53470615 - L2 LINE L2 0 3313 3253 572 304 40 40 chr17 36034291 36034538 -53470015 + MIR SINE MIR 11 257 -5 188 200 17 0 chr17 36034922 36034982 -53469571 + GA-rich Low_complexity Low_complexity 1 61 0 180 323 46 15 chr17 36035475 36035540 -53469013 + MIR SINE MIR 17 83 -125 2997 237 120 46 chr17 36036003 36036413 -53468140 + L2 LINE L2 1783 2161 -1152 382 169 26 0 chr17 36036413 36036490 -53468063 - MER116 DNA Mariner -1 79 1 2997 237 120 46 chr17 36036490 36037235 -53467318 + L2 LINE L2 2161 3024 -289 2190 124 0 10 chr17 36037235 36037534 -53467019 + AluSx SINE Alu 1 296 -16 2997 237 120 46 chr17 36037534 36037602 -53466951 + L2 LINE L2 3024 3086 -227 409 264 143 50 chr17 36037923 36038181 -53466372 - L2 LINE L2 -32 3281 3000 315 295 39 32 chr17 36038215 36038371 -53466182 + MLT1K LTR MaLR 188 344 -244 336 24 0 0 chr17 36039090 36039131 -53465422 + (CA)n Simple_repeat Simple_repeat 2 42 0 363 325 49 20 chr17 36039154 36039357 -53465196 - L1MC4a LINE L1 -1889 5919 5711 1000 231 168 40 chr17 36039814 36040243 -53464310 + MLT1J LTR MaLR 28 511 0 560 285 20 20 chr17 36040365 36040516 -53464037 + MIR3 SINE MIR 37 187 -21 193 323 129 32 chr17 36040635 36040790 -53463763 + L2 LINE L2 3101 3270 -2 219 390 122 5 chr17 36040962 36041167 -53463386 + MIR SINE MIR 20 248 -14 379 319 68 18 chr17 36041741 36041904 -53462649 + MIR SINE MIR 34 204 -58 351 327 55 0 chr17 36041942 36042052 -53462501 - MIR SINE MIR -73 189 74 1776 139 17 0 chr17 36042909 36043203 -53461350 - AluSx SINE Alu 0 312 14 1367 196 8 4 chr17 36043213 36043500 -53461053 - AluJo SINE Alu 0 309 22 392 316 22 7 chr17 36043519 36043655 -53460898 - MIR3 SINE MIR -62 146 9 331 224 113 33 chr17 36043775 36043908 -53460645 - MIR SINE MIR -67 195 47 525 261 149 63 chr17 36044731 36044953 -53459600 - MIR SINE MIR -19 243 3 1308 212 51 0 chr17 36046308 36046600 -53457953 + AluJo SINE Alu 1 307 -5 297 51 0 0 chr17 36046609 36046648 -53457905 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 262 293 35 26 chr17 36047337 36047453 -53457100 + L1MC/D LINE L1 5607 5723 -2085 674 175 140 35 chr17 36048309 36048480 -53456073 - MER5A DNA MER1_type 0 189 1 357 93 0 0 chr17 36048706 36048760 -53455793 + (GA)n Simple_repeat Simple_repeat 1 54 0 444 266 141 21 chr17 36049159 36049351 -53455202 + MIR SINE MIR 14 228 -34 2008 97 38 0 chr17 36049408 36049697 -53454856 + AluSq SINE Alu 1 300 -13 391 239 87 27 chr17 36049896 36050080 -53454473 + L1 LINE L1 4881 5075 -1071 2099 58 38 45 chr17 36050090 36050437 -53454116 - L1PA8 LINE L1 0 6172 5861 198 150 0 0 chr17 36052950 36052990 -53451563 + (T)n Simple_repeat Simple_repeat 1 40 0 534 238 27 131 chr17 36053516 36053595 -53450958 + MLT1I LTR MaLR 62 148 -261 2343 64 7 0 chr17 36053595 36053891 -53450662 + AluY SINE Alu 1 298 -13 534 238 27 131 chr17 36053891 36054185 -53450368 + MLT1I LTR MaLR 148 396 -13 418 238 70 87 chr17 36055135 36055479 -53449074 + L1ME3 LINE L1 5619 5956 -214 472 312 14 14 chr17 36055712 36055850 -53448703 - MIR3 SINE MIR -6 202 65 532 308 106 62 chr17 36055932 36056212 -53448341 + L2 LINE L2 2469 2770 -544 1978 137 3 10 chr17 36056212 36056525 -53448028 - AluSx SINE Alu 0 312 2 532 308 106 62 chr17 36056525 36056601 -53447952 + L2 LINE L2 2770 2841 -473 374 302 47 0 chr17 36056602 36056731 -53447822 + LTR16C LTR ERVL 324 458 -33 369 321 236 20 chr17 36056772 36057077 -53447476 + L2 LINE L2 2943 3313 0 197 293 91 10 chr17 36057831 36057930 -53446623 + MIR SINE MIR 82 188 -74 822 280 73 5 chr17 36058918 36059136 -53445417 + MIR SINE MIR 28 260 -2 521 303 92 3 chr17 36059161 36059465 -53445088 - L2 LINE L2 -1184 2130 1800 384 252 27 27 chr17 36060362 36060473 -53444080 + MER45A DNA AcHobo 68 178 0 373 288 82 22 chr17 36060728 36060912 -53443641 - MIR SINE MIR -29 233 39 311 308 83 26 chr17 36061508 36061664 -53442889 + MIR3 SINE MIR 21 185 -23 405 273 149 0 chr17 36062381 36062502 -53442051 - MIR3 SINE MIR -48 160 22 653 222 155 26 chr17 36062845 36063039 -53441514 - MIR SINE MIR -31 231 13 252 0 0 0 chr17 36063122 36063150 -53441403 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 187 206 0 0 chr17 36063627 36063661 -53440892 - L2 LINE L2 -339 2975 2942 267 210 173 12 chr17 36064408 36064489 -53440064 + L2 LINE L2 3214 3307 -6 832 65 0 9 chr17 36064602 36064734 -53439819 - AluSg/x SINE Alu 0 309 179 228 256 156 22 chr17 36064793 36064883 -53439670 - MIR SINE MIR -69 139 38 1332 77 10 3 chr17 36065882 36066082 -53438471 + L1P3 LINE L1 5605 5799 -355 361 113 0 0 chr17 36066056 36066109 -53438444 + L1PA11 LINE L1 6121 6173 -1 * 290 272 168 24 chr17 36066306 36066431 -53438122 + MIR3 SINE MIR 18 160 -48 192 315 105 49 chr17 36066737 36066899 -53437654 - L2 LINE L2 -229 3043 2873 1645 149 40 20 chr17 36067365 36067667 -53436886 + AluJo SINE Alu 1 308 -4 750 101 84 0 chr17 36067673 36067792 -53436761 + FRAM SINE Alu 44 172 -4 256 333 97 0 chr17 36069065 36069179 -53435374 + MIR SINE MIR 60 184 -78 375 290 65 45 chr17 36069560 36069715 -53434838 - MIR3 SINE MIR -14 194 37 197 245 97 110 chr17 36070313 36070468 -53434085 + MIR SINE MIR 20 172 -90 245 294 182 21 chr17 36070501 36070644 -53433909 - MIR SINE MIR -36 226 61 245 135 19 0 chr17 36070700 36070752 -53433801 + (CA)n Simple_repeat Simple_repeat 2 54 0 326 251 147 80 chr17 36071739 36071902 -53432651 - MIR3 SINE MIR -2 206 33 257 262 83 41 chr17 36074647 36074792 -53429761 + MIR3 SINE MIR 36 186 -22 2043 121 0 0 chr17 36074815 36075105 -53429448 + AluSx SINE Alu 1 290 -22 399 258 20 24 chr17 36075708 36075833 -53428720 - MIR SINE MIR -63 145 42 1737 134 0 11 chr17 36076458 36076726 -53427827 + AluSx SINE Alu 45 309 -3 463 313 49 17 chr17 36076769 36077117 -53427436 + L1M4 LINE L1 3342 3700 -2446 1145 121 50 11 chr17 36077459 36077641 -53426912 - L1PA10 LINE L1 -3 6165 5977 3717 130 0 0 chr17 36077643 36078211 -53426342 + L1P LINE L1 4675 5242 -904 404 281 37 7 chr17 36078219 36078354 -53426199 + LTR33 LTR ERVL 381 519 -2 287 226 0 0 chr17 36078505 36078558 -53425995 + MER5A DNA MER1_type 134 186 -3 293 268 36 45 chr17 36078748 36078860 -53425693 - HERV16 LTR ERVL -3810 1186 1088 779 144 15 0 chr17 36078860 36078992 -53425561 - L1MA3 LINE L1 0 6305 6172 4171 170 15 14 chr17 36078992 36080394 -53424159 - L1 LINE L1 -3087 4478 3073 * 10896 166 41 13 chr17 36080390 36082194 -53422359 - L1 LINE L1 -5699 1866 12 462 305 90 11 chr17 36082485 36082662 -53421891 + MIR SINE MIR 33 223 -39 431 218 0 0 chr17 36082660 36082738 -53421815 - MER5A DNA MER1_type -111 78 1 * 433 273 10 0 chr17 36083009 36083108 -53421445 + HERV16 LTR ERVL 1720 1819 -3177 350 248 0 59 chr17 36083112 36083213 -53421340 - MER53 DNA DNA 0 189 95 559 257 53 39 chr17 36083241 36083447 -53421106 + HERV16 LTR ERVL 1882 2090 -3674 313 300 112 24 chr17 36084872 36085042 -53419511 - L1ME4a LINE L1 -203 5918 5734 564 195 81 16 chr17 36085097 36085220 -53419333 - L1ME3 LINE L1 -159 6003 5873 786 10 42 0 chr17 36085226 36085322 -53419231 - L1PA4 LINE L1 -3 6152 6053 556 273 29 47 chr17 36136224 36136396 -53368157 + MIR3 SINE MIR 19 187 -21 501 295 101 25 chr17 36136756 36137116 -53367437 - L2 LINE L2 -5 3308 2828 502 253 102 36 chr17 36137159 36137522 -53367031 - L1MC5 LINE L1 -46 7915 7529 4535 209 68 38 chr17 36137624 36137698 -53366855 - L1ME3 LINE L1 -764 5382 5312 1903 156 3 10 chr17 36137698 36138012 -53366541 + AluJo SINE Alu 1 312 0 4535 209 68 38 chr17 36138012 36138722 -53365831 - L1ME3 LINE L1 -834 5312 4536 1813 169 0 17 chr17 36138722 36139018 -53365535 - AluJo SINE Alu -21 291 1 4535 209 68 38 chr17 36139018 36139637 -53364916 - L1ME3 LINE L1 -1610 4536 3937 1917 134 7 4 chr17 36139640 36139917 -53364636 + AluSq SINE Alu 1 278 -35 189 0 0 0 chr17 36139940 36139961 -53364592 + (CA)n Simple_repeat Simple_repeat 2 22 0 834 137 0 8 chr17 36140342 36140473 -53364080 + FLAM_A SINE Alu 4 133 0 6267 154 36 73 chr17 36141080 36141462 -53363091 + Charlie1a DNA MER1_type 2 396 -2365 1495 175 52 15 chr17 36141462 36141730 -53362823 - AluJo SINE Alu -13 299 22 6267 154 36 73 chr17 36141730 36142856 -53361697 + Charlie1a DNA MER1_type 396 1455 0 1312 78 0 51 chr17 36143239 36143456 -53361097 + L1MA8 LINE L1 5903 6108 -183 787 133 31 61 chr17 36143494 36143690 -53360863 + L1MA8 LINE L1 6097 6286 -5 261 222 0 0 chr17 36144369 36144432 -53360121 + (TA)n Simple_repeat Simple_repeat 2 64 0 1991 139 0 3 chr17 36144432 36144719 -53359834 - AluSx SINE Alu -26 286 1 32 43 0 0 chr17 36144727 36144773 -53359780 + AT_rich Low_complexity Low_complexity 1 46 0 995 135 0 0 chr17 36144795 36144936 -53359617 - AluJb SINE Alu -171 141 1 1591 163 48 11 chr17 36144956 36145226 -53359327 - AluJo SINE Alu -22 290 11 1455 100 66 0 chr17 36145326 36145585 -53358968 - L1MB3 LINE L1 -208 5975 5700 1232 230 19 41 chr17 36145584 36146001 -53358552 - L1ME3 LINE L1 -2357 3789 3382 * 812 271 65 0 chr17 36146010 36146209 -53358344 + MER58A DNA MER1_type 13 224 0 753 227 9 22 chr17 36146217 36146394 -53358159 - L1ME3 LINE L1 -2764 3382 3204 2080 152 0 7 chr17 36146394 36146704 -53357849 - AluJb SINE Alu 0 312 5 753 227 9 22 chr17 36146704 36146847 -53357706 - L1ME3 LINE L1 -2942 3204 2946 266 261 51 51 chr17 36147003 36147141 -53357412 - L2 LINE L2 -1477 1837 1700 2106 150 0 0 chr17 36147473 36147766 -53356787 + AluSx SINE Alu 1 293 -19 21 36 0 0 chr17 36148822 36148850 -53355703 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr17 36149195 36149218 -53355335 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 32 0 0 0 chr17 36149464 36149496 -53355057 + AT_rich Low_complexity Low_complexity 1 32 0 663 253 112 49 chr17 36149752 36150275 -53354278 - L2 LINE L2 -1 3312 2707 435 101 29 29 chr17 36150278 36150347 -53354206 - AluSg/x SINE Alu -25 284 216 1490 192 88 108 chr17 36150447 36150590 -53353963 - L2 LINE L2 -933 2381 2237 2199 117 0 16 chr17 36150590 36150907 -53353646 + AluSx SINE Alu 1 312 0 1490 192 88 108 chr17 36150907 36151283 -53353270 - L2 LINE L2 -1077 2237 1872 2270 108 3 0 chr17 36151832 36152129 -53352424 + AluSq SINE Alu 1 298 -15 2017 156 10 0 chr17 36153295 36153603 -53350950 - AluSx SINE Alu -1 311 1 263 240 0 13 chr17 36153614 36153689 -53350864 - L1ME LINE L1 -288 5833 5760 1603 31 5 0 chr17 36153983 36154177 -53350376 + L1PA4 LINE L1 5954 6148 -7 32 0 0 0 chr17 36154177 36154209 -53350344 + AT_rich Low_complexity Low_complexity 1 32 0 3187 256 133 42 chr17 36154539 36155051 -53349502 + L2 LINE L2 1313 1777 -1537 2465 61 0 0 chr17 36155051 36155348 -53349205 + AluY SINE Alu 1 297 -14 3187 256 133 42 chr17 36155348 36156137 -53348416 + L2 LINE L2 1777 2733 -581 458 289 64 80 chr17 36156138 36156512 -53348041 + L1MEd LINE L1 108 475 -5730 314 311 160 20 chr17 36156513 36156819 -53347734 + L1MEd LINE L1 573 921 -5284 1317 240 84 0 chr17 36156973 36157448 -53347105 + L1ME3A LINE L1 5651 6165 -5 476 279 117 11 chr17 36157472 36158066 -53346487 + L1MEd LINE L1 1081 1702 -4513 2161 106 23 3 chr17 36158106 36158407 -53346146 + AluSx SINE Alu 1 307 -5 320 252 38 61 chr17 36158419 36158457 -53346096 + L1MEd LINE L1 2184 2221 -4175 1359 76 0 5 chr17 36158457 36158642 -53345911 - L1PB1 LINE L1 0 6151 5968 320 252 38 61 chr17 36158642 36158734 -53345819 + L1MEd LINE L1 2221 2311 -4085 306 265 41 10 chr17 36158741 36158839 -53345714 + L1MEd LINE L1 2295 2395 -3820 2232 127 3 0 chr17 36158839 36159147 -53345406 + AluSq SINE Alu 1 309 -4 1870 159 3 20 chr17 36159154 36159455 -53345098 + AluJb SINE Alu 1 296 -16 221 167 0 37 chr17 36159460 36159514 -53345039 + G-rich Low_complexity Low_complexity 2 53 0 2146 118 3 16 chr17 36159581 36159895 -53344658 + AluSp SINE Alu 1 310 -3 380 129 0 14 chr17 36159895 36159965 -53344588 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 1307 244 90 39 chr17 36160017 36161046 -53343507 + L1MEd LINE L1 2405 3552 -2663 2150 110 3 3 chr17 36161056 36161365 -53343188 + AluSg SINE Alu 1 309 -1 692 171 0 16 chr17 36161480 36161603 -53342950 + AluSg/x SINE Alu 184 304 -8 21 0 0 0 chr17 36161631 36161652 -53342901 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr17 36162238 36162262 -53342291 + AT_rich Low_complexity Low_complexity 1 24 0 2046 208 106 37 chr17 36162586 36163229 -53341324 + L1MC4 LINE L1 7352 8038 -4 702 303 57 35 chr17 36163351 36163579 -53340974 - MIR SINE MIR -17 245 13 559 304 57 40 chr17 36163735 36164078 -53340475 + L2 LINE L2 2761 3102 -170 372 258 40 16 chr17 36164147 36164271 -53340282 + MLT1L LTR MaLR 33 159 -456 1865 168 7 3 chr17 36164431 36164734 -53339819 - AluJb SINE Alu -8 304 1 2417 103 3 0 chr17 36164757 36165069 -53339484 - AluSp SINE Alu 0 313 1 428 249 122 16 chr17 36165093 36165282 -53339271 + MLT1L LTR MaLR 399 607 -8 2080 123 0 0 chr17 36165787 36166071 -53338482 + AluSx SINE Alu 1 287 -25 198 0 0 0 chr17 36166071 36166093 -53338460 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1879 153 7 26 chr17 36166749 36167056 -53337497 - AluJb SINE Alu -11 301 1 209 294 252 36 chr17 36167632 36167938 -53336615 + L2 LINE L2 2476 2847 -467 221 246 43 43 chr17 36168447 36168516 -53336037 - MIR SINE MIR -192 70 2 213 39 0 0 chr17 36169675 36169701 -53334852 + (GGA)n Simple_repeat Simple_repeat 2 27 0 450 261 97 18 chr17 36170876 36171041 -53333512 + MER5B DNA MER1_type 1 178 0 364 216 0 0 chr17 36171396 36171470 -53333083 - MIR SINE MIR 0 262 189 2380 75 0 3 chr17 36171791 36172098 -53332455 - AluY SINE Alu -5 306 1 576 175 195 32 chr17 36172468 36172494 -53332059 - MER33 DNA MER1_type -2262 362 342 1753 164 17 10 chr17 36172494 36172793 -53331760 + AluJb SINE Alu 1 301 -11 576 175 195 32 chr17 36172793 36173047 -53331506 - MER33 DNA MER1_type -2282 342 1 394 298 92 0 chr17 36173946 36174087 -53330466 + MIR SINE MIR 28 181 -81 2046 110 0 57 chr17 36174323 36174640 -53329913 + AluSx SINE Alu 1 299 -13 1095 251 116 78 chr17 36174683 36175269 -53329284 + L2 LINE L2 2157 2764 -550 2052 72 62 14 chr17 36175475 36175765 -53328788 - AluY SINE Alu -7 304 1 932 274 203 5 chr17 36175873 36176278 -53328275 + L2 LINE L2 2825 3309 -4 471 293 92 0 chr17 36177016 36177180 -53327373 - MIR SINE MIR 0 262 84 24 0 0 0 chr17 36177219 36177243 -53327310 + AT_rich Low_complexity Low_complexity 1 24 0 2083 114 50 26 chr17 36177272 36177615 -53326938 + THE1B LTR MaLR 1 351 -13 238 266 106 43 chr17 36177678 36177772 -53326781 - MIR3 SINE MIR -95 113 14 547 212 111 69 chr17 36178073 36178262 -53326291 + MIR SINE MIR 66 262 0 1773 162 7 10 chr17 36178600 36178890 -53325663 - AluJo SINE Alu -23 289 1 649 171 12 26 chr17 36178892 36179052 -53325501 - MER20 DNA MER1_type -13 206 55 223 307 160 25 chr17 36179138 36179376 -53325177 - L2 LINE L2 -192 3080 2811 248 315 22 11 chr17 36180071 36180160 -53324393 - MER5A DNA MER1_type -61 128 39 296 259 185 0 chr17 36180200 36180308 -53324245 + MIR SINE MIR 120 247 -15 280 281 247 0 chr17 36180402 36180491 -53324062 + L2 LINE L2 3162 3272 0 879 134 0 8 chr17 36180565 36180692 -53323861 + AluJo/FLAM SINE Alu 1 126 -186 1505 172 83 3 chr17 36180693 36180983 -53323570 + AluSq SINE Alu 1 313 0 319 261 104 37 chr17 36181036 36181170 -53323383 + MIR3 SINE MIR 38 180 -28 1022 262 132 17 chr17 36182518 36183183 -53321370 + L2 LINE L2 2552 3299 -14 264 234 112 19 chr17 36183260 36183367 -53321186 - MIR SINE MIR -11 251 135 2242 210 21 10 chr17 36183379 36183988 -53320565 + L1MC/D LINE L1 4404 5019 -1127 320 208 121 45 chr17 36183989 36184125 -53320428 - MIR SINE MIR -62 146 3 2367 85 7 0 chr17 36184153 36184448 -53320105 - AluSg SINE Alu -13 297 1 428 164 27 0 chr17 36184709 36184782 -53319771 - L2 LINE L2 0 3313 3239 589 194 31 12 chr17 36184828 36184988 -53319565 - Charlie5 DNA MER1_type -35 2577 2415 1299 144 44 0 chr17 36184993 36185235 -53319318 - Tigger3(Golem) DNA MER2_type -1 3037 2755 450 0 0 0 chr17 36185235 36185285 -53319268 + (CA)n Simple_repeat Simple_repeat 1 50 0 1299 144 44 0 chr17 36185285 36185305 -53319248 - Tigger3(Golem) DNA MER2_type -283 2755 2737 1762 122 0 8 chr17 36185305 36185551 -53319002 + AluSp SINE Alu 47 290 -23 35 41 0 0 chr17 36185589 36185638 -53318915 + AT_rich Low_complexity Low_complexity 1 49 0 485 153 188 0 chr17 36185638 36185723 -53318830 - AluJ/FLAM SINE Alu -211 101 1 550 260 176 36 chr17 36186054 36186255 -53318298 + L1MC/D LINE L1 5296 5468 -2340 3637 81 7 68 chr17 36186255 36186845 -53317708 + MER41A LTR ERV1 1 554 0 550 260 176 36 chr17 36186845 36187001 -53317552 + L1MC/D LINE L1 5468 5703 -2105 654 228 72 12 chr17 36187035 36187202 -53317351 + MIR SINE MIR 76 252 -10 428 337 75 5 chr17 36187600 36187799 -53316754 - MIR SINE MIR 0 262 50 220 313 261 0 chr17 36188730 36188845 -53315708 - L2 LINE L2 0 3272 3128 634 263 78 26 chr17 36189094 36189326 -53315227 - MIR SINE MIR -10 252 9 1688 114 2 143 chr17 36189634 36190027 -53314526 + MER47A DNA MER2_type 29 366 0 231 204 0 0 chr17 36190029 36190078 -53314475 + (TG)n Simple_repeat Simple_repeat 2 50 0 284 304 56 43 chr17 36190122 36190283 -53314270 - MIR SINE MIR -13 249 87 32 43 0 0 chr17 36191288 36191334 -53313219 + AT_rich Low_complexity Low_complexity 1 46 0 1934 162 3 0 chr17 36191417 36191714 -53312839 - AluJo SINE Alu -14 298 1 345 270 60 0 chr17 36191875 36191975 -53312578 - MIR SINE MIR -20 242 137 259 284 0 0 chr17 36192193 36192260 -53312293 + MER5A DNA MER1_type 9 75 -114 2006 149 23 0 chr17 36192260 36192561 -53311992 + AluSx SINE Alu 2 309 -3 2195 112 44 0 chr17 36192567 36192862 -53311691 + AluSx SINE Alu 1 308 -4 220 188 21 0 chr17 36192865 36192913 -53311640 + MER5A DNA MER1_type 61 109 -80 5970 28 5 1 chr17 36193099 36193754 -53310799 + SVA Other Other 722 1378 -8 339 212 120 54 chr17 36194085 36194269 -53310284 + MIR3 SINE MIR 10 205 -3 195 42 0 0 chr17 36194308 36194332 -53310221 + (TTCC)n Simple_repeat Simple_repeat 2 25 0 292 296 91 0 chr17 36194595 36194727 -53309826 + MIR3 SINE MIR 20 163 -45 369 268 140 18 chr17 36196730 36196793 -53307760 - L2 LINE L2 -307 3006 2952 2224 116 0 7 chr17 36196793 36197096 -53307457 + AluSq SINE Alu 1 301 -12 369 268 140 18 chr17 36197096 36197232 -53307321 - L2 LINE L2 -361 2952 2785 991 206 47 5 chr17 36197571 36197785 -53306768 - MIR SINE MIR -28 234 12 2142 118 6 16 chr17 36197916 36198229 -53306324 - AluSx SINE Alu -2 310 1 395 294 124 13 chr17 36198301 36198454 -53306099 - MIR SINE MIR -73 189 20 187 273 18 0 chr17 36198453 36198508 -53306045 - L2 LINE L2 -1 3271 3216 * 634 289 75 99 chr17 36198769 36198953 -53305600 + MLT1J LTR MaLR 34 221 -290 2171 95 13 23 chr17 36198953 36199257 -53305296 + AluSx SINE Alu 1 301 -11 634 289 75 99 chr17 36199257 36199472 -53305081 + MLT1J LTR MaLR 221 423 -88 1888 134 17 7 chr17 36199472 36199764 -53304789 - AluSx SINE Alu -17 295 1 634 289 75 99 chr17 36199764 36199806 -53304747 + MLT1J LTR MaLR 423 465 -46 1855 209 76 0 chr17 36200304 36200806 -53303747 - L1M4 LINE L1 -1890 4256 3676 2014 208 117 25 chr17 36200818 36201333 -53303220 - MER68 LTR ERV1 0 562 1 556 295 83 14 chr17 36201919 36202136 -53302417 - MIR SINE MIR 0 262 31 2124 143 3 0 chr17 36202158 36202466 -53302087 - AluJo SINE Alu -3 309 1 254 222 16 151 chr17 36202731 36202857 -53301696 + MER20B DNA MER1_type 59 167 -616 2425 107 8 30 chr17 36204243 36204606 -53299947 + THE1A LTR MaLR 1 355 0 12280 83 1 2 chr17 36204606 36206187 -53298366 + THE1A-int LTR MaLR 1 1580 0 2584 114 8 0 chr17 36206187 36206539 -53298014 + THE1A LTR MaLR 1 355 0 3841 152 78 1 chr17 36206658 36207351 -53297202 + L1MB3 LINE L1 5435 6180 -3 341 269 0 0 chr17 36207801 36207879 -53296674 + L1MC/D LINE L1 5525 5602 -2206 294 241 170 7 chr17 36207892 36208039 -53296514 + L1M4c LINE L1 1558 2110 -4273 1641 94 0 0 chr17 36208177 36208378 -53296175 + AluSg/x SINE Alu 84 284 -26 1316 157 0 57 chr17 36208792 36209022 -53295531 + AluJo SINE Alu 17 233 -79 577 255 108 37 chr17 36209223 36209576 -53294977 + L1M4c LINE L1 3638 4015 -2367 1052 205 163 6 chr17 36209578 36209910 -53294643 - HsTC2 DNA Tc2 0 1898 1515 411 226 12 0 chr17 36209900 36209984 -53294569 - HsTC2 DNA Tc2 -543 1355 1271 * 709 157 0 0 chr17 36210031 36210146 -53294407 + AluJo SINE Alu 2 116 -186 504 0 0 0 chr17 36210146 36210202 -53294351 + (CATA)n Simple_repeat Simple_repeat 3 58 0 703 159 45 0 chr17 36210792 36210968 -53293585 + FLAM_C SINE Alu 6 187 0 1057 167 12 0 chr17 36210969 36211137 -53293416 + AluJo SINE Alu 121 290 -22 2103 116 27 3 chr17 36211202 36211496 -53293057 + AluSq SINE Alu 1 301 -12 324 273 78 23 chr17 36211639 36211767 -53292786 - MLT1L LTR MaLR -165 450 316 794 158 0 29 chr17 36211807 36211946 -53292607 + AluJo SINE Alu 2 136 -176 953 268 125 8 chr17 36211957 36212326 -53292227 - MER57B LTR ERV1 0 434 23 2109 102 13 26 chr17 36212330 36212633 -53291920 - AluSq SINE Alu -14 299 1 2052 114 28 0 chr17 36212650 36212940 -53291613 - AluSx SINE Alu -14 298 1 518 252 29 66 chr17 36212988 36213230 -53291323 - MLT1L LTR MaLR -366 249 17 201 288 163 25 chr17 36213290 36213450 -53291103 - MIR SINE MIR -49 213 32 2205 134 0 0 chr17 36213739 36214038 -53290515 + AluSx SINE Alu 1 299 -13 24 0 0 0 chr17 36214143 36214167 -53290386 + AT_rich Low_complexity Low_complexity 1 24 0 511 92 0 0 chr17 36214167 36214232 -53290321 - U6 snRNA snRNA -42 65 1 448 273 62 40 chr17 36214344 36214520 -53290033 - L1M4 LINE L1 -1970 4176 3997 437 278 80 17 chr17 36214822 36214998 -53289555 + MIR SINE MIR 59 245 -17 778 205 72 0 chr17 36215061 36215227 -53289326 + MER45A DNA AcHobo 1 178 0 210 293 12 24 chr17 36215655 36215737 -53288816 + MIR SINE MIR 179 259 -3 2235 102 30 3 chr17 36216369 36216672 -53287881 - AluSx SINE Alu -1 311 1 1658 130 45 41 chr17 36217039 36217331 -53287222 + AluSx SINE Alu 5 297 -15 359 273 167 0 chr17 36217384 36217534 -53287019 + MIR SINE MIR 58 232 -30 1744 101 124 4 chr17 36217555 36217812 -53286741 - AluSq SINE Alu -25 288 1 242 247 21 31 chr17 36218743 36218816 -53285737 + G-rich Low_complexity Low_complexity 5 78 -22 189 0 0 0 chr17 36218816 36218837 -53285716 + (CCGGG)n Simple_repeat Simple_repeat 4 24 0 242 247 21 31 chr17 36218837 36218860 -53285693 + G-rich Low_complexity Low_complexity 78 100 0 26 50 0 0 chr17 36219043 36219083 -53285470 + GC_rich Low_complexity Low_complexity 1 40 0 1724 178 31 0 chr17 36220777 36221063 -53283490 - AluJb SINE Alu -17 295 1 1605 169 30 17 chr17 36221643 36221938 -53282615 - AluJb SINE Alu -13 299 1 184 211 39 19 chr17 36222246 36222298 -53282255 - L3b LINE CR1 -331 1252 1200 2217 110 7 0 chr17 36222413 36222712 -53281841 + AluSq SINE Alu 1 301 -12 189 279 44 29 chr17 36223042 36223110 -53281443 - MER5A DNA MER1_type -50 139 71 25 31 0 0 chr17 36223114 36223146 -53281407 + AT_rich Low_complexity Low_complexity 1 32 0 1944 103 0 96 chr17 36223197 36223533 -53281020 - AluSx SINE Alu 0 306 1 2056 127 14 3 chr17 36223535 36223826 -53280727 - AluSx SINE Alu -17 295 2 2142 109 17 0 chr17 36223886 36224179 -53280374 - AluSx SINE Alu -9 303 6 225 222 0 0 chr17 36224189 36224234 -53280319 + MER5B DNA MER1_type 134 178 0 2281 129 0 0 chr17 36224333 36224642 -53279911 - AluSx SINE Alu -3 309 1 599 238 63 68 chr17 36225234 36225440 -53279113 + MIR SINE MIR 47 251 -11 1300 80 0 6 chr17 36228825 36228987 -53275566 + AluSx SINE Alu 9 169 -143 2020 132 0 39 chr17 36229144 36229455 -53275098 - AluSx SINE Alu -13 299 1 1804 186 7 3 chr17 36229539 36229840 -53274713 + AluJo SINE Alu 1 302 -10 198 321 28 18 chr17 36229927 36230036 -53274517 - MER5A DNA MER1_type 0 189 80 239 293 15 75 chr17 36230133 36230266 -53274287 - MIR SINE MIR -64 144 20 842 41 0 0 chr17 36230282 36230380 -53274173 + MER30 DNA MER1_type 3 100 -130 471 229 85 25 chr17 36230566 36230812 -53273741 - MER5C DNA MER1_type -2 322 1 221 175 38 12 chr17 36231010 36231090 -53273463 + (TTTAA)n Simple_repeat Simple_repeat 3 84 0 2216 96 11 0 chr17 36231414 36231741 -53272812 - AluSp SINE Alu 0 331 2 398 96 0 0 chr17 36231764 36231816 -53272737 - MER66A LTR ERV1 -140 338 287 2454 93 0 3 chr17 36231846 36232157 -53272396 + AluSx SINE Alu 1 310 -2 461 270 98 0 chr17 36233412 36233575 -53270978 - MIR SINE MIR -3 259 81 306 50 0 0 chr17 36234337 36234377 -53270176 + (TG)n Simple_repeat Simple_repeat 1 40 0 2383 92 3 0 chr17 36235085 36235379 -53269174 - AluSp SINE Alu -18 295 1 958 211 32 113 chr17 36235397 36235541 -53269012 - L1MD1 LINE L1 -16 6226 6072 255 61 0 0 chr17 36235541 36235574 -53268979 + (TG)n Simple_repeat Simple_repeat 2 34 0 958 211 32 113 chr17 36235574 36235808 -53268745 - L1MD1 LINE L1 -170 6072 5879 2096 144 0 0 chr17 36235843 36236142 -53268411 - AluJb SINE Alu -13 299 1 348 130 19 0 chr17 36236147 36236201 -53268352 - FLAM SINE Alu -4 129 75 1999 164 26 72 chr17 36236201 36236507 -53268046 - L1MD1 LINE L1 -472 5887 5569 2039 124 3 13 chr17 36236507 36236805 -53267748 - AluSx SINE Alu -17 295 1 1999 164 26 72 chr17 36236805 36236921 -53267632 - L1MD1 LINE L1 -790 5569 5485 2086 141 0 3 chr17 36236921 36237226 -53267327 - AluSx SINE Alu -8 304 1 1999 164 26 72 chr17 36237226 36237259 -53267294 - L1MD1 LINE L1 -874 5485 5452 1694 177 7 0 chr17 36237685 36237968 -53266585 + AluJb SINE Alu 15 299 -13 230 204 0 19 chr17 36238099 36238153 -53266400 + (TA)n Simple_repeat Simple_repeat 2 54 0 256 251 5 163 chr17 36240339 36240386 -53264167 + MER5A DNA MER1_type 7 60 -129 2348 81 13 7 chr17 36240386 36240684 -53263869 + AluSx SINE Alu 1 300 -12 256 251 5 163 chr17 36240684 36240723 -53263830 + MER5A DNA MER1_type 60 103 -86 2296 120 0 3 chr17 36240723 36241024 -53263529 + AluSx SINE Alu 1 300 -12 256 251 5 163 chr17 36241024 36241139 -53263414 + MER5A DNA MER1_type 103 177 -12 1085 152 11 0 chr17 36241991 36242169 -53262384 - AluSg/x SINE Alu -3 309 130 2400 92 3 9 chr17 36242552 36242867 -53261686 - AluSp SINE Alu 0 313 1 2415 99 3 0 chr17 36244655 36244967 -53259586 - AluSp SINE Alu 0 313 1 286 277 181 30 chr17 36245395 36245561 -53258992 + L2 LINE L2 2887 3077 -195 2203 102 3 3 chr17 36245724 36246018 -53258535 - AluSc SINE Alu -15 294 1 2264 100 10 0 chr17 36246161 36246452 -53258101 + AluSx SINE Alu 1 294 -18 1103 195 4 22 chr17 36246452 36246669 -53257884 + AluSg/x SINE Alu 73 287 -25 564 308 49 26 chr17 36248247 36248552 -53256001 + L3b LINE CR1 1129 1440 -143 813 246 128 79 chr17 36248556 36248822 -53255731 - MLT1H LTR MaLR 0 549 298 2394 93 7 0 chr17 36248822 36249123 -53255430 + AluSx SINE Alu 1 303 -9 813 246 128 79 chr17 36249123 36249360 -53255193 - MLT1H LTR MaLR -251 298 28 2399 83 0 0 chr17 36249360 36249650 -53254903 - AluSg SINE Alu -20 290 1 813 246 128 79 chr17 36249650 36249680 -53254873 - MLT1H LTR MaLR -521 28 1 241 245 82 20 chr17 36249747 36249845 -53254708 + MER5B DNA MER1_type 4 107 -71 307 254 0 0 chr17 36250215 36250278 -53254275 + L2 LINE L2 3210 3272 0 198 293 0 17 chr17 36250588 36250646 -53253907 - L2 LINE L2 0 3313 3257 478 340 56 46 chr17 36250670 36250922 -53253631 - L2 LINE L2 -312 3001 2741 2281 115 0 13 chr17 36250922 36251236 -53253317 + AluSq SINE Alu 1 310 -3 478 340 56 46 chr17 36251236 36251464 -53253089 - L2 LINE L2 -572 2741 2517 2455 86 7 0 chr17 36251464 36251765 -53252788 + AluSp SINE Alu 1 303 -10 2706 173 34 27 chr17 36251969 36252431 -53252122 - LTR26B LTR ERV1 0 531 62 2134 100 14 0 chr17 36252431 36252748 -53251805 - AluSq SINE Alu 0 321 1 2706 173 34 27 chr17 36252748 36252811 -53251742 - LTR26B LTR ERV1 -469 62 1 2437 71 0 3 chr17 36252923 36253220 -53251333 + AluY SINE Alu 1 296 -15 193 271 21 0 chr17 36253235 36253283 -53251270 - L2 LINE L2 -20 3252 3204 232 226 48 0 chr17 36253308 36253370 -53251183 - MIR SINE MIR -117 145 81 462 218 0 30 chr17 36253650 36253751 -53250802 + U13 snRNA snRNA 5 102 -2 366 312 148 20 chr17 36254433 36254635 -53249918 - MIR SINE MIR -34 228 1 396 296 88 19 chr17 36255315 36255474 -53249079 + L2 LINE L2 3103 3272 0 208 197 13 66 chr17 36255525 36255601 -53248952 + CT-rich Low_complexity Low_complexity 3 74 0 391 233 22 11 chr17 36256054 36256144 -53248409 - MIR3 SINE MIR -25 183 93 2048 123 40 0 chr17 36257140 36257441 -53247112 - AluSp SINE Alu 0 313 1 681 145 29 65 chr17 36257465 36257493 -53247060 - FLAM_C SINE Alu -169 133 106 1522 189 15 4 chr17 36257493 36257757 -53246796 + AluJo SINE Alu 12 278 -34 681 145 29 65 chr17 36257757 36257866 -53246687 - FLAM_C SINE Alu -196 106 1 971 147 18 12 chr17 36257877 36258040 -53246513 - AluJb SINE Alu -12 300 137 2352 104 0 0 chr17 36258043 36258341 -53246212 - AluSx SINE Alu -14 298 1 201 39 0 0 chr17 36258810 36258836 -53245717 + (TG)n Simple_repeat Simple_repeat 1 26 0 2396 81 0 0 chr17 36259702 36259713 -53244840 - AluY SINE Alu -14 297 287 198 0 0 0 chr17 36259713 36259735 -53244818 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2396 81 0 0 chr17 36259735 36260020 -53244533 - AluY SINE Alu -23 288 1 2248 123 0 0 chr17 36260089 36260389 -53244164 + AluSx SINE Alu 1 300 -12 948 181 6 0 chr17 36260389 36260555 -53243998 + AluJb SINE Alu 137 303 -9 210 37 0 0 chr17 36260587 36260614 -53243939 + (CAA)n Simple_repeat Simple_repeat 2 28 0 182 330 45 11 chr17 36260643 36260731 -53243822 - MIR SINE MIR -4 258 168 2157 113 3 7 chr17 36262099 36262399 -53242154 - AluSx SINE Alu -13 299 1 2348 112 0 3 chr17 36262607 36262911 -53241642 + AluSx SINE Alu 1 303 -9 190 211 0 39 chr17 36262963 36263015 -53241538 + L2 LINE L2 3187 3236 -77 1130 157 0 0 chr17 36263105 36263264 -53241289 + AluJb SINE Alu 137 295 -17 1316 121 16 0 chr17 36263515 36263705 -53240848 - AluSg/x SINE Alu -18 294 102 1273 166 96 33 chr17 36263764 36264035 -53240518 + AluJo SINE Alu 1 288 -24 2341 99 3 10 chr17 36265287 36265601 -53238952 - AluSx SINE Alu 0 312 1 2198 116 7 0 chr17 36266105 36266406 -53238147 - AluSx SINE Alu -9 303 1 212 258 15 15 chr17 36266870 36266936 -53237617 - L2 LINE L2 -630 2684 2619 358 274 148 15 chr17 36266943 36267078 -53237475 - L2 LINE L2 -42 3271 3119 880 144 40 64 chr17 36267098 36267246 -53237307 + FRAM SINE Alu 1 146 -166 261 0 0 0 chr17 36267246 36267275 -53237278 + (CA)n Simple_repeat Simple_repeat 1 29 0 880 144 40 64 chr17 36267275 36267299 -53237254 + FRAM SINE Alu 146 169 -7 240 306 18 36 chr17 36267299 36267410 -53237143 - L2 LINE L2 -284 3029 2921 2422 95 0 9 chr17 36267506 36267821 -53236732 - AluSx SINE Alu 0 312 1 708 243 142 24 chr17 36267847 36268166 -53236387 - L2 LINE L2 -1144 2170 1787 2212 107 10 0 chr17 36268166 36268457 -53236096 + AluSp SINE Alu 1 294 -19 708 243 142 24 chr17 36268457 36268561 -53235992 - L2 LINE L2 -1527 1787 1697 2337 97 0 0 chr17 36268623 36268923 -53235630 + AluSc SINE Alu 1 300 -9 1878 131 14 14 chr17 36268934 36269225 -53235328 + AluJb SINE Alu 1 291 -21 2055 219 133 47 chr17 36269240 36269826 -53234727 - L1ME3A LINE L1 -5 6165 5508 2345 98 7 3 chr17 36269826 36270132 -53234421 - AluSx SINE Alu -2 310 4 2055 219 133 47 chr17 36270132 36270247 -53234306 - L1ME3A LINE L1 -662 5508 5404 193 250 0 15 chr17 36270253 36270321 -53234232 - L2 LINE L2 -1612 1702 1636 591 262 76 19 chr17 36270395 36270605 -53233948 + MIR SINE MIR 21 242 -20 2155 122 7 0 chr17 36272139 36272433 -53232120 + AluSq SINE Alu 1 296 -17 286 155 12 12 chr17 36272435 36272519 -53232034 + (TA)n Simple_repeat Simple_repeat 1 84 0 2354 88 0 7 chr17 36272716 36273013 -53231540 - AluSc SINE Alu -14 295 1 2103 128 10 0 chr17 36273316 36273612 -53230941 + AluSx SINE Alu 2 300 -12 1611 177 19 32 chr17 36273782 36273954 -53230599 - AluJo SINE Alu -6 306 133 227 31 31 0 chr17 36273954 36273986 -53230567 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2488 58 0 3 chr17 36273986 36274280 -53230273 - AluY SINE Alu -18 293 1 1611 177 19 32 chr17 36274280 36274416 -53230137 - AluJo SINE Alu -177 135 1 2135 116 3 7 chr17 36274575 36274894 -53229659 - AluSq SINE Alu 0 313 1 2555 58 0 0 chr17 36276019 36276327 -53228226 - AluY SINE Alu -3 308 1 203 392 0 10 chr17 36276559 36276656 -53227897 + L2 LINE L2 3107 3202 -70 2418 79 0 0 chr17 36276734 36277024 -53227529 + AluSx SINE Alu 1 290 -22 287 314 22 36 chr17 36277224 36277361 -53227192 - MIR SINE MIR -127 135 1 813 173 0 0 chr17 36277406 36277539 -53227014 + AluJo/FLAM SINE Alu 1 133 -179 2046 124 10 7 chr17 36277541 36277668 -53226885 + AluSg SINE Alu 1 126 -184 6811 27 0 0 chr17 36277668 36278442 -53226111 + L1PA3 LINE L1 5374 6147 -8 1475 75 16 0 chr17 36278442 36278630 -53225923 + AluY SINE Alu 119 309 -2 2046 124 10 7 chr17 36278630 36278800 -53225753 + AluSg SINE Alu 125 300 -10 226 291 29 29 chr17 36279338 36279441 -53225112 + MIR3 SINE MIR 81 183 -25 1911 148 3 30 chr17 36279785 36280088 -53224465 - AluJb SINE Alu -17 295 1 2238 114 0 0 chr17 36280093 36280390 -53224163 - AluSq SINE Alu -16 297 1 2365 93 3 0 chr17 36280396 36280698 -53223855 - AluSp SINE Alu -10 303 1 195 265 161 37 chr17 36280744 36280906 -53223647 - L2 LINE L2 -12 3301 3120 249 300 42 40 chr17 36280978 36281133 -53223420 + MIR SINE MIR 1 141 -67 2215 93 17 0 chr17 36281146 36281437 -53223116 + AluSq SINE Alu 7 302 -11 513 306 91 24 chr17 36281950 36282159 -53222394 + MIR SINE MIR 23 245 -17 312 228 31 47 chr17 36282582 36282709 -53221844 - MIR SINE MIR -27 235 111 359 217 14 0 chr17 36282803 36282872 -53221681 - MIR SINE MIR -165 97 28 182 271 102 51 chr17 36282989 36283107 -53221446 - L2 LINE L2 -21 3251 3128 385 333 41 7 chr17 36285547 36285694 -53218859 + MIR SINE MIR 40 191 -71 632 221 87 6 chr17 36285836 36286008 -53218545 - MIR SINE MIR -3 259 74 2297 131 12 12 chr17 36287550 36287887 -53216666 - MER1B DNA MER1_type 0 337 1 2018 136 24 3 chr17 36288467 36288762 -53215791 + AluJb SINE Alu 1 301 -11 209 320 10 21 chr17 36289955 36290052 -53214501 + L3 LINE CR1 1131 1226 -351 215 295 98 33 chr17 36290135 36290257 -53214296 + L3 LINE CR1 1343 1472 -105 261 316 75 29 chr17 36291132 36291306 -53213247 - MIR SINE MIR -73 189 8 213 315 144 0 chr17 36291906 36292017 -53212536 - MIR SINE MIR 0 262 136 319 288 59 7 chr17 36292288 36292441 -53212112 - MER103 DNA DNA -3 163 3 2014 146 3 3 chr17 36292874 36293175 -53211378 + AluSx SINE Alu 1 301 -11 1111 223 17 4 chr17 36294898 36295136 -53209417 + MIR SINE MIR 21 261 -1 183 244 44 0 chr17 36295154 36295199 -53209354 - L2 LINE L2 -5 3267 3221 2243 104 21 0 chr17 36297379 36297668 -53206885 - AluSg SINE Alu -14 296 2 1698 163 17 17 chr17 36299084 36299210 -53205343 + AluJo SINE Alu 10 135 -177 2549 53 0 10 chr17 36299210 36299543 -53205010 + AluY SINE Alu 1 311 0 1698 163 17 17 chr17 36299543 36299704 -53204849 + AluJo SINE Alu 134 297 -15 1902 148 0 30 chr17 36300100 36300404 -53204149 + AluSx SINE Alu 1 295 -17 407 244 119 18 chr17 36301603 36301771 -53202782 - MIR SINE MIR -28 234 50 688 228 116 16 chr17 36301780 36301969 -53202584 - MER3 DNA MER1_type 0 209 2 2180 100 3 51 chr17 36304526 36304837 -53199716 + AluSx SINE Alu 1 296 -16 994 121 92 0 chr17 36305490 36305631 -53198922 + FRAM SINE Alu 1 153 -23 1970 112 51 4 chr17 36306935 36307211 -53197342 + AluSx SINE Alu 1 289 -23 2334 115 7 0 chr17 36307227 36307532 -53197021 + AluSx SINE Alu 1 307 -5 2338 113 3 0 chr17 36307583 36307894 -53196659 + AluSp SINE Alu 1 312 -1 340 339 62 0 chr17 36307899 36308029 -53196524 + MIR3 SINE MIR 31 168 -40 371 293 111 21 chr17 36308902 36309092 -53195461 + MIR SINE MIR 18 216 -46 413 276 86 9 chr17 36313214 36313330 -53191223 + L2 LINE L2 3189 3313 0 486 299 82 16 chr17 36314392 36314586 -53189967 - MIR SINE MIR -51 211 5 326 265 103 8 chr17 36315167 36315284 -53189269 - MIR3 SINE MIR -78 130 3 395 285 42 7 chr17 36315893 36316037 -53188516 - MIR SINE MIR -86 176 28 1789 181 13 7 chr17 36317244 36317553 -53187000 + AluJo SINE Alu 1 311 -1 1789 193 0 7 chr17 36317561 36317867 -53186686 + AluJb SINE Alu 1 304 -8 736 180 112 12 chr17 36318267 36318428 -53186125 - MER45A DNA AcHobo -1 177 1 307 256 120 26 chr17 36318761 36318878 -53185675 - MIR SINE MIR -63 199 72 818 142 0 0 chr17 36318999 36319126 -53185427 + FLAM_C SINE Alu 1 127 -6 423 224 41 10 chr17 36319231 36319329 -53185224 - MIR3 SINE MIR -10 198 98 2632 46 10 0 chr17 36319924 36320228 -53184325 - AluY SINE Alu -4 307 1 208 232 130 14 chr17 36320252 36320321 -53184232 - MIR SINE MIR -29 233 157 194 217 67 67 chr17 36320506 36320566 -53183987 - MIR3 SINE MIR -140 68 9 233 284 0 15 chr17 36321119 36321186 -53183367 - MIR SINE MIR -195 67 2 2300 113 0 22 chr17 36321519 36321837 -53182716 + AluSx SINE Alu 1 311 -1 515 282 46 66 chr17 36322899 36323069 -53181484 + L1MC4 LINE L1 6575 6740 -1302 2055 138 24 0 chr17 36323069 36323365 -53181188 + AluSx SINE Alu 1 303 -9 515 282 46 66 chr17 36323365 36323435 -53181118 + L1MC4 LINE L1 6740 6810 -1232 338 111 95 0 chr17 36323435 36323498 -53181055 + Alu SINE Alu 234 302 0 819 273 46 28 chr17 36323501 36323783 -53180770 + L1MC4 LINE L1 6741 7027 -1015 506 153 54 45 chr17 36323822 36323933 -53180620 + L1MC4 LINE L1 7549 7660 -382 454 235 181 0 chr17 36324212 36324361 -53180192 - MIR SINE MIR 0 262 87 1668 223 16 83 chr17 36324672 36325229 -53179324 - MLT2B1 LTR ERVL 0 520 1 220 242 116 63 chr17 36325243 36325338 -53179215 - MIR3 SINE MIR -22 186 87 808 268 24 5 chr17 36326334 36326543 -53178010 - MIR SINE MIR -21 241 29 521 236 75 105 chr17 36326864 36327131 -53177422 - L2 LINE L2 0 3272 3014 381 179 74 11 chr17 36327156 36327251 -53177302 + MER5B DNA MER1_type 1 101 -77 269 311 90 40 chr17 36328061 36328238 -53176315 + MIR SINE MIR 33 218 -44 419 87 14 0 chr17 36328916 36328985 -53175568 + (TG)n Simple_repeat Simple_repeat 2 71 0 465 266 44 59 chr17 36329032 36329235 -53175318 - MIR SINE MIR -16 246 47 419 267 146 18 chr17 36330070 36330235 -53174318 - MIR SINE MIR -30 232 47 752 259 45 5 chr17 36331920 36332140 -53172413 + MIR SINE MIR 19 247 -15 1757 179 10 17 chr17 36332198 36332500 -53172053 - AluJo SINE Alu -12 300 1 235 287 17 11 chr17 36332585 36332687 -53171866 - MIR SINE MIR -59 149 83 744 224 39 0 chr17 36332729 36332885 -53171668 - FRAM SINE Alu -4 162 1 454 299 137 5 chr17 36333503 36333707 -53170846 + MIR SINE MIR 32 262 0 282 284 57 65 chr17 36333996 36334225 -53170328 - L2 LINE L2 -183 3089 2863 438 276 47 37 chr17 36334894 36335111 -53169442 + MIR SINE MIR 7 228 -34 366 188 150 45 chr17 36335238 36335371 -53169182 + MIR SINE MIR 116 262 0 1925 116 19 0 chr17 36335377 36335656 -53168897 - AluSx SINE Alu 0 304 21 198 237 17 17 chr17 36336695 36336754 -53167799 + L2 LINE L2 3251 3309 -4 723 276 19 9 chr17 36337846 36338056 -53166497 - MIR SINE MIR -8 254 43 1665 191 17 14 chr17 36338145 36338439 -53166114 - AluJo SINE Alu -17 295 1 236 288 25 0 chr17 36338439 36338513 -53166040 - MIR SINE MIR -134 128 53 359 259 170 7 chr17 36339393 36339528 -53165025 - MIR SINE MIR -86 176 20 237 250 0 0 chr17 36339708 36339764 -53164789 + MIR SINE MIR 88 143 -65 348 228 18 35 chr17 36339887 36340001 -53164552 + L2 LINE L2 2941 3052 -261 764 159 7 13 chr17 36340965 36341116 -53163437 + L1MB3 LINE L1 6032 6181 -2 243 61 0 0 chr17 36341839 36341872 -53162681 + (TG)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr17 36341871 36341893 -53162660 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 241 358 16 49 chr17 36342242 36342365 -53162188 + MIR SINE MIR 30 148 -60 315 313 10 10 chr17 36342531 36342630 -53161923 + MIR3 SINE MIR 109 207 -1 2265 113 0 0 chr17 36342935 36343254 -53161299 + AluSx SINE Alu 1 312 0 643 251 13 54 chr17 36343345 36343609 -53160944 - MIR SINE MIR -6 256 8 1945 238 71 18 chr17 36343670 36344322 -53160231 - L1ME LINE L1 -5375 695 10 552 286 146 19 chr17 36345430 36345643 -53158910 - MIR SINE MIR -13 249 10 369 344 120 10 chr17 36345797 36345989 -53158564 + MIR SINE MIR 43 255 -7 389 336 14 0 chr17 36346233 36346389 -53158164 - MIR3 SINE MIR -27 181 23 224 241 35 0 chr17 36346890 36346948 -53157605 + CT-rich Low_complexity Low_complexity 2 61 0 1223 281 27 27 chr17 36347708 36348152 -53156401 - LTR16A LTR ERVL -6 444 1 241 280 65 32 chr17 36348152 36348245 -53156308 + MIR3 SINE MIR 86 181 -27 * 1053 282 117 5 chr17 36348222 36348453 -53156100 - L2 LINE L2 -36 3277 3073 1160 143 84 5 chr17 36348453 36348656 -53155897 - MER20 DNA MER1_type 0 219 1 1053 282 117 5 chr17 36348656 36348942 -53155611 - L2 LINE L2 -240 3073 2683 209 291 38 13 chr17 36349153 36349232 -53155321 - MIR SINE MIR -71 137 57 280 316 61 17 chr17 36349705 36349877 -53154676 + MIR3 SINE MIR 5 180 -73 427 287 26 0 chr17 36350386 36350501 -53154052 + MIR SINE MIR 31 148 -114 4499 155 20 29 chr17 36350503 36350721 -53153832 + L1MB7 LINE L1 5112 5331 -853 2152 144 0 0 chr17 36350721 36351019 -53153534 + AluSx SINE Alu 1 298 -14 4499 155 20 29 chr17 36351019 36351865 -53152688 + L1MB7 LINE L1 5331 6174 -10 284 271 159 9 chr17 36351873 36351980 -53152573 + MIR SINE MIR 137 259 -3 216 0 0 0 chr17 36352874 36352898 -53151655 + (TG)n Simple_repeat Simple_repeat 1 24 0 255 302 104 11 chr17 36352906 36352930 -53151623 + HAL1 LINE L1 1154 1174 -1333 240 35 0 0 chr17 36352930 36352959 -53151594 + (TG)n Simple_repeat Simple_repeat 2 30 0 255 302 104 11 chr17 36352959 36353116 -53151437 + HAL1 LINE L1 1174 1352 -1155 595 275 12 83 chr17 36353117 36353368 -53151185 + L1ME3 LINE L1 4917 5141 -1005 2071 114 29 0 chr17 36353368 36353666 -53150887 - AluSx SINE Alu 0 306 1 595 275 12 83 chr17 36353666 36353751 -53150802 + L1ME3 LINE L1 5141 5230 -916 358 226 36 0 chr17 36353788 36353872 -53150681 + L1ME3 LINE L1 5975 6061 -101 297 0 0 0 chr17 36353932 36353965 -53150588 + (CA)n Simple_repeat Simple_repeat 2 34 0 2703 226 38 38 chr17 36353974 36354467 -53150086 + L1ME3 LINE L1 5236 5731 -431 1597 182 0 7 chr17 36354467 36354753 -53149800 + L1PB4 LINE L1 5855 6138 -18 2703 226 38 38 chr17 36354753 36355084 -53149469 + L1ME3 LINE L1 5731 6061 -101 730 255 189 19 chr17 36355167 36355532 -53149021 + HAL1 LINE L1 1338 1764 -743 361 253 117 57 chr17 36355551 36355851 -53148702 + HAL1 LINE L1 1835 2152 -355 258 233 8 90 chr17 36355892 36356025 -53148528 + HAL1b LINE L1 747 868 -480 645 235 132 4 chr17 36356093 36356377 -53148176 + HAL1b LINE L1 797 2506 -1 380 320 16 8 chr17 36356961 36357083 -53147470 + MIR3 SINE MIR 38 160 -48 257 262 8 12 chr17 36357882 36358020 -53146533 - MIR SINE MIR -1 261 69 1707 223 97 46 chr17 36358020 36358577 -53145976 + MLT1E LTR MaLR 1 593 0 250 322 43 9 chr17 36358827 36358942 -53145611 + MIR3 SINE MIR 65 183 -25 210 158 0 0 chr17 36359469 36359507 -53145046 + T-rich Low_complexity Low_complexity 1 38 0 974 253 37 4 chr17 36359626 36359871 -53144682 + MIR SINE MIR 9 261 -1 250 279 0 15 chr17 36360066 36360134 -53144419 + GA-rich Low_complexity Low_complexity 1 67 0 377 314 44 7 chr17 36360279 36360416 -53144137 - MIR SINE MIR -110 152 11 278 278 67 0 chr17 36360447 36360537 -53144016 + MIR3 SINE MIR 86 181 -27 272 337 59 0 chr17 36360887 36360988 -53143565 + MIR SINE MIR 39 145 -63 3673 116 11 15 chr17 36361143 36361671 -53142882 - MER1A DNA MER1_type -1 526 1 204 239 82 141 chr17 36362135 36362319 -53142234 - L2 LINE L2 -73 3199 3027 218 292 0 22 chr17 36362571 36362660 -53141893 - MIR3 SINE MIR -119 89 3 932 258 182 31 chr17 36363213 36363636 -53140917 + LTR16C LTR ERVL 5 491 0 326 299 52 82 chr17 36363636 36363830 -53140723 + MIR SINE MIR 10 197 -65 237 248 221 9 chr17 36364563 36364676 -53139877 + MIR3 SINE MIR 13 149 -59 550 278 65 29 chr17 36364862 36365337 -53139216 - LTR33 LTR ERVL 0 521 4 303 410 7 0 chr17 36365350 36365494 -53139059 - L3 LINE CR1 -104 1473 1329 501 274 95 17 chr17 36366091 36366270 -53138283 - L3 LINE CR1 -1 1576 1384 212 259 0 102 chr17 36367404 36367601 -53136952 + CT-rich Low_complexity Low_complexity 2 178 0 611 261 131 7 chr17 36367732 36368023 -53136530 - L1ME4a LINE L1 -11 6110 5784 189 0 0 0 chr17 36370133 36370154 -53134399 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 413 240 22 34 chr17 36371258 36371411 -53133142 - MLT1I LTR MaLR -206 203 58 541 263 16 54 chr17 36371535 36371721 -53132832 - MIR3 SINE MIR 0 208 30 515 206 361 6 chr17 36372179 36372359 -53132194 - MIR SINE MIR -14 248 5 1397 191 140 8 chr17 36372400 36372793 -53131760 + Charlie4a DNA MER1_type 30 474 -34 676 282 61 14 chr17 36373701 36373914 -53130639 - MIR SINE MIR -23 239 17 316 198 99 0 chr17 36374279 36374360 -53130193 + L2 LINE L2 3150 3238 -34 198 0 0 0 chr17 36374425 36374447 -53130106 + (TTG)n Simple_repeat Simple_repeat 3 24 0 414 337 62 0 chr17 36375666 36375844 -53128709 - MIR SINE MIR -6 256 68 1081 249 43 7 chr17 36375848 36376149 -53128404 + MLT1J LTR MaLR 90 401 -110 1660 249 90 49 chr17 36376192 36376883 -53127670 - MER72 LTR ERV1 0 722 4 490 295 119 21 chr17 36377098 36377291 -53127262 + MIR SINE MIR 51 262 0 344 291 101 76 chr17 36377300 36377458 -53127095 + MIR3 SINE MIR 31 192 -16 237 216 0 108 chr17 36377460 36377534 -53127019 - MIR3 SINE MIR -49 159 94 649 277 66 8 chr17 36377675 36377917 -53126636 + MLT1J1 LTR MaLR 191 446 0 185 289 67 22 chr17 36378374 36378464 -53126089 + MIR3 SINE MIR 9 102 -106 * 212 265 59 15 chr17 36378461 36378529 -53126024 - MIR SINE MIR -111 97 27 183 100 0 0 chr17 36379124 36379154 -53125399 + (ATG)n Simple_repeat Simple_repeat 2 31 0 242 233 17 0 chr17 36379155 36379215 -53125338 - MIR SINE MIR -63 145 85 412 273 106 92 chr17 36379230 36379644 -53124909 - L2 LINE L2 0 3272 2853 2254 182 117 2 chr17 36380012 36380500 -53124053 + MER74A LTR ERVL 15 558 0 2253 166 112 51 chr17 36380506 36381017 -53123536 - MLT1F LTR MaLR 0 542 1 592 243 77 18 chr17 36381654 36381823 -53122730 - MIR3 SINE MIR -15 193 15 226 224 0 20 chr17 36382763 36382812 -53121741 + L2 LINE L2 3141 3188 -84 191 296 170 52 chr17 36382912 36383047 -53121506 - MIR SINE MIR -103 159 9 569 217 22 51 chr17 36383395 36383533 -53121020 + MIR3 SINE MIR 41 174 -34 2401 71 3 3 chr17 36383978 36384273 -53120280 - AluY SINE Alu -16 295 1 352 282 94 8 chr17 36384275 36384392 -53120161 - MIR SINE MIR -114 148 22 461 247 233 7 chr17 36384492 36384642 -53119911 + MER5A DNA MER1_type 1 184 -5 215 305 136 25 chr17 36384950 36385068 -53119485 - MIR3 SINE MIR -31 177 47 554 264 145 15 chr17 36385071 36385340 -53119213 - MLT1L LTR MaLR -4 611 308 255 311 83 23 chr17 36386371 36386503 -53118050 + L2 LINE L2 2718 2857 -457 1212 153 5 0 chr17 36387410 36387613 -53116940 - L1PB1 LINE L1 -1 6150 5947 212 185 19 0 chr17 36388154 36388208 -53116345 + (TG)n Simple_repeat Simple_repeat 2 56 0 342 123 0 0 chr17 36388710 36388767 -53115786 + (GA)n Simple_repeat Simple_repeat 1 57 0 2323 113 0 0 chr17 36389277 36389578 -53114975 + AluSx SINE Alu 1 301 -11 413 263 92 13 chr17 36389657 36389809 -53114744 + MLT1L LTR MaLR 19 182 -433 244 188 0 0 chr17 36389892 36389940 -53114613 + MLT1L LTR MaLR 327 374 -241 394 248 48 0 chr17 36390012 36390117 -53114436 + MLT1L LTR MaLR 481 590 -25 423 320 28 28 chr17 36390274 36390363 -53114190 + MIR SINE MIR 20 108 -154 762 226 55 115 chr17 36390363 36390598 -53113955 - MER58A DNA MER1_type 0 224 4 423 320 28 28 chr17 36390598 36390686 -53113867 + MIR SINE MIR 107 197 -65 2584 68 0 3 chr17 36390701 36391012 -53113541 + AluY SINE Alu 1 310 -1 636 204 59 26 chr17 36391113 36391265 -53113288 + MIR SINE MIR 63 219 -43 207 114 0 0 chr17 36391280 36391315 -53113238 + (TAA)n Simple_repeat Simple_repeat 2 36 0 181 265 284 0 chr17 36391861 36391963 -53112590 + MIR3 SINE MIR 74 204 -4 625 277 71 19 chr17 36392383 36392650 -53111903 - HAL1 LINE L1 -520 1987 1707 1049 218 123 73 chr17 36392672 36393305 -53111248 - HAL1 LINE L1 -991 1516 852 1030 252 44 42 chr17 36393557 36393620 -53110933 - HAL1 LINE L1 -2109 398 337 817 140 0 22 chr17 36393620 36393756 -53110797 - FLAM_A SINE Alu 0 133 1 1030 252 44 42 chr17 36393756 36394053 -53110500 - HAL1 LINE L1 -2170 337 37 309 322 8 8 chr17 36394566 36394684 -53109869 + (TATATG)n Simple_repeat Simple_repeat 4 121 0 1798 161 42 44 chr17 36394784 36395060 -53109493 - MLT1A1 LTR MaLR -2 363 87 2204 122 0 10 chr17 36395060 36395364 -53109189 - AluSg SINE Alu -9 301 1 1798 161 42 44 chr17 36395364 36395448 -53109105 - MLT1A1 LTR MaLR -278 87 4 190 309 0 0 chr17 36395462 36395517 -53109036 + MIR SINE MIR 92 146 -62 315 226 12 48 chr17 36396045 36396129 -53108424 - L2 LINE L2 0 3313 3233 834 263 21 8 chr17 36396672 36396912 -53107641 + MIR SINE MIR 17 259 -3 309 310 101 0 chr17 36397820 36397949 -53106604 - L2 LINE L2 -9 3263 3122 505 274 4 0 chr17 36397985 36398127 -53106426 + MIR SINE MIR 21 167 -41 1454 251 91 19 chr17 36398135 36398609 -53105944 - MLT1G LTR MaLR -13 577 70 187 280 70 70 chr17 36398629 36398729 -53105824 + MIR SINE MIR 159 258 -4 417 338 111 26 chr17 36398823 36399275 -53105278 - L2 LINE L2 -218 3054 2564 210 290 0 14 chr17 36399783 36399852 -53104701 + MIR SINE MIR 23 90 -172 307 320 20 0 chr17 36399975 36400075 -53104478 - MIR SINE MIR -72 136 35 348 198 44 22 chr17 36400331 36400422 -53104131 + MIR SINE MIR 45 137 -71 209 300 146 31 chr17 36400520 36400650 -53103903 + MIR SINE MIR 3 147 -115 804 259 65 34 chr17 36400810 36401062 -53103491 + MLT1J2 LTR MaLR 1 278 -131 1186 147 59 0 chr17 36401062 36401266 -53103287 + MER20 DNA MER1_type 1 216 -3 804 259 65 34 chr17 36401266 36401403 -53103150 + MLT1J2 LTR MaLR 278 409 0 208 306 216 0 chr17 36401406 36401517 -53103036 - MIR SINE MIR -105 157 23 192 302 0 0 chr17 36402780 36402833 -53101720 + L2 LINE L2 3208 3260 -12 294 269 109 8 chr17 36403238 36403357 -53101196 - MIR3 SINE MIR -65 143 13 320 198 0 8 chr17 36403689 36403815 -53100738 + GA-rich Low_complexity Low_complexity 2 126 0 285 259 60 12 chr17 36403847 36404013 -53100540 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 2413 90 3 0 chr17 36404094 36404393 -53100160 + AluSx SINE Alu 1 300 -12 212 344 37 55 chr17 36404528 36404691 -53099862 - MIR SINE MIR -69 193 34 2020 144 10 0 chr17 36405019 36405310 -53099243 - AluJb SINE Alu -18 294 1 220 171 0 0 chr17 36405381 36405416 -53099137 + polypyrimidine Low_complexity Low_complexity 3 37 0 954 283 85 10 chr17 36405422 36406026 -53098527 - L2 LINE L2 -19 3294 2636 267 328 116 20 chr17 36406231 36406429 -53098124 - MIR SINE MIR -6 256 40 486 311 85 64 chr17 36406513 36406644 -53097909 + L2 LINE L2 2512 2639 -633 1668 171 7 39 chr17 36406644 36406954 -53097599 - AluJo SINE Alu -7 305 6 486 311 85 64 chr17 36406954 36407354 -53097199 + L2 LINE L2 2639 3053 -219 315 287 131 0 chr17 36409214 36409336 -53095217 + MIR3 SINE MIR 20 157 -51 329 293 16 64 chr17 36409344 36409461 -53095092 + MER5A DNA MER1_type 2 125 -64 2399 82 0 3 chr17 36409461 36409753 -53094800 - AluY SINE Alu -20 291 1 329 293 16 64 chr17 36409753 36409808 -53094745 + MER5A DNA MER1_type 125 181 -8 588 279 148 30 chr17 36409922 36410287 -53094266 + L3 LINE CR1 1169 1576 -1 1197 176 0 10 chr17 36411403 36411636 -53092917 + AluJb SINE Alu 109 339 0 446 332 142 22 chr17 36411749 36412116 -53092437 - L3 LINE CR1 -1 1576 1166 928 242 90 30 chr17 36412127 36412517 -53092036 - MLT1J2 LTR MaLR 0 409 9 249 299 19 56 chr17 36412523 36412630 -53091923 - L3 LINE CR1 -425 1152 1050 657 274 0 0 chr17 36412678 36412835 -53091718 - MER63A DNA MER1_type -1 209 53 217 294 44 15 chr17 36412901 36412969 -53091584 - MIR SINE MIR -80 182 113 240 254 123 26 chr17 36413113 36413227 -53091326 + L2 LINE L2 3180 3304 -9 244 298 0 0 chr17 36414331 36414388 -53090165 + polypyrimidine Low_complexity Low_complexity 1 57 0 411 295 54 0 chr17 36414560 36414672 -53089881 + L2 LINE L2 3155 3272 0 1972 158 48 33 chr17 36414841 36415061 -53089492 - MSTA LTR MaLR 0 428 213 2488 76 0 13 chr17 36415061 36415365 -53089188 + AluY SINE Alu 1 300 -11 2279 113 0 10 chr17 36415373 36415674 -53088879 - AluSq SINE Alu -15 298 1 1972 158 48 33 chr17 36415674 36415863 -53088690 - MSTA LTR MaLR -221 207 4 235 261 207 9 chr17 36416183 36416294 -53088259 - MIR3 SINE MIR -67 141 9 237 65 0 0 chr17 36416499 36416530 -53088023 + (TG)n Simple_repeat Simple_repeat 1 31 0 239 309 163 0 chr17 36417032 36417155 -53087398 + MIR3 SINE MIR 66 208 0 955 240 36 12 chr17 36417332 36417582 -53086971 + MIR SINE MIR 7 262 0 427 296 48 39 chr17 36418486 36418716 -53085837 + L2 LINE L2 2422 2653 -661 1105 263 215 14 chr17 36418723 36419142 -53085411 - MLT1J LTR MaLR 0 511 9 271 325 6 57 chr17 36419172 36419329 -53085224 + L2 LINE L2 2717 2865 -449 875 291 31 14 chr17 36419577 36419866 -53084687 + LTR16C LTR ERVL 198 491 0 959 344 37 53 chr17 36420056 36420413 -53084140 + MERVL LTR ERVL 429 774 -4222 2325 93 0 14 chr17 36420413 36420732 -53083821 + AluSq SINE Alu 1 315 0 959 344 37 53 chr17 36420732 36420990 -53083563 + MERVL LTR ERVL 774 1035 -3961 1865 331 69 33 chr17 36421086 36422161 -53082392 + MERVL LTR ERVL 1311 2424 -3340 1169 353 62 30 chr17 36422174 36423049 -53081504 + MERVL LTR ERVL 4378 5280 -205 842 256 99 52 chr17 36423351 36423733 -53080820 + LTR16C LTR ERVL 92 491 0 234 333 0 0 chr17 36423835 36423916 -53080637 + L2 LINE L2 3188 3268 -4 268 350 104 6 chr17 36424769 36424932 -53079621 - MIR SINE MIR -11 251 73 307 354 126 20 chr17 36425809 36426247 -53078306 - L2 LINE L2 -19 3294 2811 617 267 26 119 chr17 36426701 36426977 -53077576 - MER102a DNA MER1_type -1098 319 81 1634 187 29 4 chr17 36426977 36427255 -53077298 + AluJb SINE Alu 13 297 -15 617 267 26 119 chr17 36427255 36427330 -53077223 - MER102a DNA MER1_type -1336 81 1 204 222 48 32 chr17 36427335 36427398 -53077155 - MIR SINE MIR -111 151 88 197 244 0 0 chr17 36428485 36428526 -53076027 + MIR SINE MIR 104 144 -64 550 242 170 0 chr17 36428586 36428739 -53075814 + MER5A DNA MER1_type 4 182 -7 323 333 54 6 chr17 36429352 36429520 -53075033 - L3 LINE CR1 -19 1558 1383 216 294 90 111 chr17 36429563 36429842 -53074711 - L2 LINE L2 -8 3264 2992 257 257 46 66 chr17 36430088 36430240 -53074313 + L2 LINE L2 2871 3019 -253 2375 109 0 0 chr17 36431205 36431509 -53073044 + AluSc SINE Alu 1 304 -5 1979 153 3 10 chr17 36431577 36431891 -53072662 - AluJb SINE Alu 0 312 1 1057 250 8 32 chr17 36432990 36433242 -53071311 + MIR SINE MIR 17 262 0 1450 195 0 26 chr17 36433260 36433532 -53071021 - AluJo SINE Alu -36 276 12 362 220 69 75 chr17 36433645 36433823 -53070730 + MER20B DNA MER1_type 37 217 -2 248 130 22 0 chr17 36433952 36433998 -53070555 + CT-rich Low_complexity Low_complexity 4 50 0 219 355 91 9 chr17 36434000 36434110 -53070443 - L2 LINE L2 -31 3241 3123 407 210 193 0 chr17 36435225 36435344 -53069209 + MIR SINE MIR 52 193 -69 591 330 48 23 chr17 36436326 36436677 -53067876 - L1ME4a LINE L1 -233 5888 5529 511 231 8 8 chr17 36436733 36436854 -53067699 + MIR3 SINE MIR 67 187 -21 557 291 38 26 chr17 36437175 36437387 -53067166 + MIR SINE MIR 34 246 -16 787 250 41 0 chr17 36438576 36438772 -53065781 + MER58A DNA MER1_type 1 204 -20 271 327 0 59 chr17 36439716 36439869 -53064684 + L2 LINE L2 2709 2852 -462 291 259 37 0 chr17 36440450 36440531 -53064022 + MER20B DNA MER1_type 56 139 -644 2541 74 0 3 chr17 36440651 36440961 -53063592 - AluY SINE Alu 0 311 3 1360 223 87 14 chr17 36440970 36441405 -53063148 + MER20B DNA MER1_type 287 753 -30 319 248 19 9 chr17 36443103 36443208 -53061345 - MER53 DNA DNA -83 106 1 189 268 0 0 chr17 36443548 36443589 -53060964 - MIR3 SINE MIR -49 159 119 302 347 20 20 chr17 36443848 36443998 -53060555 + L2 LINE L2 2703 2852 -462 240 189 113 0 chr17 36444362 36444415 -53060138 + L2 LINE L2 3234 3292 -21 426 39 0 0 chr17 36444423 36444475 -53060078 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 491 273 0 0 chr17 36444479 36444589 -53059964 + MIR SINE MIR 30 139 -69 240 261 117 127 chr17 36445266 36445692 -53058861 + L2 LINE L2 2822 3243 -29 985 210 34 59 chr17 36445741 36445823 -53058730 + MER33 DNA MER1_type 9 91 -2494 1915 146 0 0 chr17 36445823 36446098 -53058455 - AluJb SINE Alu -29 283 9 985 210 34 59 chr17 36446098 36446339 -53058214 + MER33 DNA MER1_type 91 324 0 693 261 148 5 chr17 36446339 36446542 -53058011 + MIR SINE MIR 31 262 0 328 213 0 0 chr17 36446649 36446710 -53057843 - L2 LINE L2 -3 3310 3250 237 271 29 0 chr17 36446738 36446808 -53057745 - L2 LINE L2 0 3313 3242 656 239 74 32 chr17 36448087 36448282 -53056271 + MIR SINE MIR 3 211 -51 186 200 156 0 chr17 36448913 36448958 -53055595 + L2 LINE L2 3139 3190 -82 735 306 17 44 chr17 36449974 36450268 -53054285 - L3 LINE CR1 -76 1501 1216 262 235 374 18 chr17 36450321 36450487 -53054066 + MIR SINE MIR 28 252 -10 497 263 159 29 chr17 36451279 36451765 -53052788 + MLT1H LTR MaLR 21 555 0 * 799 247 62 54 chr17 36451765 36452116 -53052437 - LTR16C LTR ERVL -30 461 108 3119 215 44 8 chr17 36452295 36453040 -53051513 + MER20B DNA MER1_type 7 778 -5 211 231 58 0 chr17 36453166 36453218 -53051335 - L2 LINE L2 -219 3053 2999 316 244 11 78 chr17 36453319 36453409 -53051144 - MIR SINE MIR -119 143 60 599 289 146 19 chr17 36453475 36453581 -53050972 - L2 LINE L2 -7 3306 3215 1152 160 68 5 chr17 36453581 36453787 -53050766 - MER20B DNA MER1_type 0 219 1 599 289 146 19 chr17 36453787 36453988 -53050565 - L2 LINE L2 -98 3215 2960 930 162 0 0 chr17 36453993 36454172 -53050381 + (CAT)n Simple_repeat Simple_repeat 1 179 0 526 222 79 0 chr17 36454195 36454321 -53050232 - MIR SINE MIR -15 247 112 295 259 175 42 chr17 36454317 36454406 -53050147 - L2 LINE L2 -356 2958 2882 * 2109 120 3 0 chr17 36454406 36454719 -53049834 + AluSq SINE Alu 1 314 0 295 259 175 42 chr17 36454719 36454771 -53049782 - L2 LINE L2 -432 2882 2797 1063 243 58 37 chr17 36454817 36455142 -53049411 + LTR16A LTR ERVL 81 412 -38 1679 290 145 14 chr17 36455183 36456015 -53048538 - L2 LINE L2 -534 2780 1840 413 309 56 6 chr17 36456704 36456866 -53047687 - MIR SINE MIR -61 201 32 234 271 29 14 chr17 36456876 36456946 -53047607 + MIR3 SINE MIR 116 186 -22 185 204 48 117 chr17 36457758 36457861 -53046692 - L2 LINE L2 -155 3117 3022 249 264 44 55 chr17 36458067 36458158 -53046395 - MIR3 SINE MIR 0 208 119 311 208 22 49 chr17 36458428 36458539 -53046014 - MIR SINE MIR -62 146 76 183 349 0 0 chr17 36458855 36458918 -53045635 - MIR SINE MIR -90 172 110 523 294 128 9 chr17 36458956 36459174 -53045379 + MIR SINE MIR 18 261 -1 256 286 152 0 chr17 36459371 36459483 -53045070 + MIR SINE MIR 81 209 -53 223 317 12 0 chr17 36460112 36460194 -53044359 + (TTCA)n Simple_repeat Simple_repeat 2 84 0 268 378 84 19 chr17 36460490 36460752 -53043801 + L2 LINE L2 2600 2878 -436 252 351 80 53 chr17 36460812 36461114 -53043439 + L2 LINE L2 2931 3240 -32 406 244 149 21 chr17 36461220 36461423 -53043130 + MIR SINE MIR 33 262 0 322 315 54 34 chr17 36461427 36461576 -53042977 + MIR SINE MIR 52 203 -59 192 318 63 0 chr17 36462054 36462117 -53042436 - L2 LINE L2 -35 3237 3171 473 261 48 53 chr17 36462372 36462560 -53041993 - MIR SINE MIR -56 206 20 313 312 76 13 chr17 36463120 36463277 -53041276 + MIR3 SINE MIR 34 200 -8 185 264 154 45 chr17 36463468 36463578 -53040975 + MIR SINE MIR 32 153 -109 215 310 0 23 chr17 36464349 36464436 -53040117 + G-rich Low_complexity Low_complexity 5 89 0 1628 184 74 0 chr17 36464753 36465036 -53039517 - AluJb SINE Alu -8 304 1 614 299 51 0 chr17 36465330 36465544 -53039009 + MIR SINE MIR 31 255 -7 212 296 0 0 chr17 36465552 36465596 -53038957 + C-rich Low_complexity Low_complexity 3 46 0 273 158 53 18 chr17 36466200 36466257 -53038296 - MIR3 SINE MIR -53 155 97 453 223 32 45 chr17 36466399 36466556 -53037997 + L1ME3A LINE L1 6016 6170 0 182 318 34 23 chr17 36467061 36467149 -53037404 - MIR SINE MIR -87 121 33 182 286 14 43 chr17 36467640 36467710 -53036843 - L2 LINE L2 -4 3309 3242 2214 129 7 0 chr17 36468209 36468511 -53036042 + AluSg SINE Alu 1 304 -6 537 272 171 42 chr17 36468702 36468989 -53035564 + L2 LINE L2 2990 3313 0 201 74 0 0 chr17 36469151 36469178 -53035375 + (CA)n Simple_repeat Simple_repeat 1 27 0 438 231 74 8 chr17 36469240 36469361 -53035192 + MIR SINE MIR 134 262 0 272 171 46 0 chr17 36469363 36469413 -53035140 - MIR SINE MIR -85 123 71 522 299 58 33 chr17 36470099 36470312 -53034241 + MIR SINE MIR 35 256 -6 700 335 10 0 chr17 36470891 36471085 -53033468 + MER91A DNA MER1_type 1 196 0 224 324 99 9 chr17 36471239 36471350 -53033203 + L2 LINE L2 3152 3272 0 239 270 0 72 chr17 36471361 36471472 -53033081 + GA-rich Low_complexity Low_complexity 5 107 0 1819 171 19 45 chr17 36471640 36471785 -53032768 + MLT1A1 LTR MaLR 1 148 -217 1727 165 157 9 chr17 36471785 36472130 -53032423 + MSTD LTR MaLR 1 396 0 1819 171 19 45 chr17 36472130 36472359 -53032194 + MLT1A1 LTR MaLR 148 365 0 692 217 94 42 chr17 36472743 36472955 -53031598 + MIR SINE MIR 13 235 -27 293 363 22 37 chr17 36473197 36473467 -53031086 + L1MD2 LINE L1 21 286 -6254 10447 226 59 26 chr17 36473978 36476254 -53028299 + L1MD2 LINE L1 916 3116 -3444 1819 159 21 10 chr17 36476254 36476544 -53028009 - AluJo SINE Alu -18 294 2 10447 226 59 26 chr17 36476544 36477089 -53027464 + L1MD2 LINE L1 3116 3642 -2918 1670 199 48 11 chr17 36477089 36477441 -53027112 + MLT1A1 LTR MaLR 1 365 0 10447 226 59 26 chr17 36477441 36478733 -53025820 + L1MD2 LINE L1 3642 4890 -1670 4800 23 2 9 chr17 36478733 36479302 -53025251 + L1PA4 LINE L1 5591 6155 0 10447 226 59 26 chr17 36479302 36479748 -53024805 + L1MD2 LINE L1 4890 5320 -1240 1968 155 6 25 chr17 36479748 36480065 -53024488 - AluSx SINE Alu -1 311 1 10447 226 59 26 chr17 36480065 36480317 -53024236 + L1MD2 LINE L1 5320 5829 -731 1151 159 0 0 chr17 36480319 36480489 -53024064 + FRAM SINE Alu 1 169 -7 2659 203 92 6 chr17 36480503 36481147 -53023406 + L1MD2 LINE L1 5834 6532 -221 2294 68 36 0 chr17 36481541 36481821 -53022732 - AluSg SINE Alu -14 296 7 319 248 70 57 chr17 36482242 36482399 -53022154 + L2 LINE L2 2949 3107 -165 199 231 215 0 chr17 36482491 36482556 -53021997 + L2 LINE L2 3192 3270 -2 287 311 92 0 chr17 36482756 36482875 -53021678 + MIR SINE MIR 16 145 -63 766 300 58 0 chr17 36483703 36483926 -53020627 + MIR SINE MIR 27 262 0 459 313 44 40 chr17 36484001 36484228 -53020325 + MIR SINE MIR 6 233 -29 792 281 70 42 chr17 36484402 36484761 -53019792 + MLT1H LTR MaLR 1 369 -180 1020 304 48 24 chr17 36484887 36485259 -53019294 - MLT1K LTR MaLR -206 382 2 681 82 20 0 chr17 36485934 36486032 -53018521 + MSTC LTR MaLR 1 100 -328 3306 74 21 0 chr17 36486032 36486467 -53018086 + L1PA10 LINE L1 5721 6164 -4 2001 140 14 29 chr17 36486612 36486961 -53017592 + MSTC LTR MaLR 85 428 0 775 192 33 22 chr17 36487421 36487603 -53016950 + MLT1B LTR MaLR 4 187 -187 519 128 10 87 chr17 36487616 36487811 -53016742 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 238 143 20 20 chr17 36487815 36487864 -53016689 + CT-rich Low_complexity Low_complexity 1 49 0 941 196 11 0 chr17 36487878 36488062 -53016491 + MLT1B LTR MaLR 205 390 0 214 316 74 11 chr17 36488091 36488186 -53016367 - MIR SINE MIR -43 219 119 309 297 59 10 chr17 36488363 36488464 -53016089 - MIR SINE MIR -69 193 88 1992 184 39 11 chr17 36488470 36488829 -53015724 + LTR32 LTR ERVL 14 382 -89 2456 84 0 0 chr17 36488836 36489145 -53015408 + AluY SINE Alu 1 309 -2 195 69 0 0 chr17 36489149 36489178 -53015375 + (CAAAAA)n Simple_repeat Simple_repeat 4 32 0 563 129 0 0 chr17 36489181 36489266 -53015287 + LTR32 LTR ERVL 382 466 -5 188 244 0 0 chr17 36489441 36489482 -53015071 + L2 LINE L2 3268 3308 -5 529 256 264 34 chr17 36489747 36490106 -53014447 + L2 LINE L2 2839 3294 -19 2193 119 3 0 chr17 36490106 36490399 -53014154 - AluSx SINE Alu -18 294 1 529 256 264 34 chr17 36490399 36490425 -53014128 + L2 LINE L2 3294 3313 0 203 133 0 0 chr17 36490719 36490749 -53013804 + (GGCTG)n Simple_repeat Simple_repeat 5 34 0 2132 119 0 0 chr17 36491237 36491515 -53013038 + AluSq SINE Alu 17 294 -19 467 210 25 76 chr17 36492343 36492500 -53012053 - LTR67 LTR ERVL -398 159 11 243 336 91 28 chr17 36492530 36492783 -53011770 + L2 LINE L2 2301 2569 -745 336 202 58 29 chr17 36492960 36493064 -53011489 - MLT1J LTR MaLR -9 502 396 433 216 168 0 chr17 36493259 36493384 -53011169 - MLT1J LTR MaLR -364 147 2 440 347 34 11 chr17 36493456 36493632 -53010921 - MIR SINE MIR -70 192 13 372 250 117 23 chr17 36493619 36493747 -53010806 + L2 LINE L2 3174 3313 0 * 672 163 0 0 chr17 36493892 36494021 -53010532 + (TG)n Simple_repeat Simple_repeat 1 129 0 1604 161 0 39 chr17 36494126 36494436 -53010117 - AluJo SINE Alu -14 298 1 900 220 48 0 chr17 36494531 36494737 -53009816 - MIR SINE MIR -3 259 45 270 220 0 17 chr17 36494849 36494908 -53009645 - MIR SINE MIR -63 145 88 1999 136 0 0 chr17 36495792 36496117 -53008436 + AluSx SINE Alu 1 312 0 449 270 106 61 chr17 36496195 36496562 -53007991 - MLT1H LTR MaLR -22 387 57 551 198 217 32 chr17 36496642 36496799 -53007754 + MER5A DNA MER1_type 4 189 0 384 335 47 75 chr17 36496877 36497199 -53007354 + L2 LINE L2 2944 3256 -16 216 0 0 0 chr17 36497833 36497857 -53006696 + (A)n Simple_repeat Simple_repeat 1 24 0 205 250 0 0 chr17 36499629 36499669 -53004884 - MIR SINE MIR -138 70 31 295 241 0 46 chr17 36500673 36500760 -53003793 + MIR3 SINE MIR 91 173 -35 293 243 303 6 chr17 36501030 36501177 -53003376 + MIR SINE MIR 3 190 -72 686 299 17 37 chr17 36501663 36501915 -53002638 + MIR SINE MIR 6 252 -10 312 272 49 12 chr17 36501963 36502044 -53002509 - L2 LINE L2 -47 3225 3142 241 234 121 32 chr17 36502574 36502698 -53001855 + MIR3 SINE MIR 20 154 -54 228 328 22 44 chr17 36502915 36503098 -53001455 - MARNA DNA Mariner -12 574 396 529 293 102 45 chr17 36503301 36503818 -53000735 + L2 LINE L2 2717 3268 -4 374 220 108 128 chr17 36503868 36504118 -53000435 - MIR SINE MIR -2 260 16 196 268 37 24 chr17 36504167 36504249 -53000304 - MIR3 SINE MIR -29 179 97 213 245 0 0 chr17 36504987 36505036 -52999517 + (TA)n Simple_repeat Simple_repeat 2 50 0 827 77 29 164 chr17 36505101 36505308 -52999245 - L1MA7 LINE L1 -2 6289 6111 286 257 224 26 chr17 36505538 36505690 -52998863 - MIR SINE MIR -33 229 48 269 346 10 20 chr17 36506582 36506683 -52997870 + MER81 DNA DNA 13 112 -2 406 154 33 0 chr17 36506971 36507062 -52997491 + CT-rich Low_complexity Low_complexity 1 94 0 * 711 366 12 0 chr17 36507051 36507215 -52997338 + C-rich Low_complexity Low_complexity 3 168 0 360 0 0 0 chr17 36507215 36507255 -52997298 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1971 112 27 3 chr17 36507255 36507549 -52997004 - AluSx SINE Alu -11 301 1 341 264 27 64 chr17 36507898 36508008 -52996545 + MIR3 SINE MIR 82 187 -21 * 440 224 84 28 chr17 36507979 36508122 -52996431 + MER5A DNA MER1_type 17 167 -22 517 131 81 20 chr17 36508290 36508389 -52996164 + MIR SINE MIR 85 189 -73 292 250 140 0 chr17 36509296 36509396 -52995157 + MIR SINE MIR 34 147 -115 192 385 22 11 chr17 36509900 36509991 -52994562 - MIR SINE MIR -87 121 30 222 267 0 17 chr17 36510010 36510070 -52994483 + (TAA)n Simple_repeat Simple_repeat 3 61 0 940 268 63 0 chr17 36510070 36510309 -52994244 - MIR SINE MIR 0 262 9 302 341 53 8 chr17 36510839 36510983 -52993570 - MIR3 SINE MIR -62 146 11 201 233 23 0 chr17 36511632 36511675 -52992878 + G-rich Low_complexity Low_complexity 4 47 0 1685 163 3 0 chr17 36511765 36512048 -52992505 - AluJb SINE Alu -28 284 1 604 242 110 48 chr17 36513254 36513481 -52991072 + MIR SINE MIR 2 242 -20 345 305 9 9 chr17 36513556 36513661 -52990892 + MIR SINE MIR 17 121 -87 559 244 122 6 chr17 36514406 36514562 -52989991 - MIR SINE MIR -21 241 68 588 244 88 31 chr17 36515336 36515529 -52989024 - MIR SINE MIR -52 210 7 420 283 0 0 chr17 36515595 36515687 -52988866 + MIR3 SINE MIR 108 199 -9 6350 78 24 3 chr17 36515701 36516551 -52988002 + L1PA11 LINE L1 5307 6173 -1 470 79 13 0 chr17 36517529 36517605 -52986948 + (TG)n Simple_repeat Simple_repeat 1 77 0 401 265 17 26 chr17 36517820 36517937 -52986616 + MIR3 SINE MIR 79 194 -14 400 148 10 50 chr17 36518118 36518219 -52986334 - L1MA8 LINE L1 0 6291 6195 1573 204 10 20 chr17 36518599 36518893 -52985660 - AluJb SINE Alu -11 291 1 462 318 73 34 chr17 36519090 36519176 -52985377 - MIR SINE MIR -8 254 173 1168 208 29 123 chr17 36519176 36519589 -52984964 - MLT1A2 LTR MaLR 0 374 1 462 318 73 34 chr17 36519589 36519681 -52984872 - MIR SINE MIR -89 173 69 278 284 31 71 chr17 36521516 36521643 -52982910 - L2 LINE L2 -8 3264 3143 339 244 119 9 chr17 36522672 36522784 -52981769 - MIR SINE MIR -66 142 31 313 276 142 67 chr17 36522954 36523155 -52981398 - MIR SINE MIR -3 259 36 1953 198 10 57 chr17 36523155 36523644 -52980909 + MER31B LTR ERV1 1 466 0 313 276 142 67 chr17 36523644 36523681 -52980872 - MIR SINE MIR -226 36 3 401 287 81 15 chr17 36523697 36523833 -52980720 + MIR SINE MIR 28 172 -90 189 321 149 16 chr17 36523809 36523868 -52980685 - MIR SINE MIR 0 262 212 * 2127 135 0 0 chr17 36523868 36524179 -52980374 - AluSx SINE Alu -1 311 1 189 321 149 16 chr17 36524179 36524308 -52980245 - MIR SINE MIR -50 212 45 * 193 271 133 73 chr17 36524231 36524382 -52980171 + MIR3 SINE MIR 42 201 -7 192 383 32 0 chr17 36524569 36524663 -52979890 - L3b LINE CR1 -330 1253 1157 255 125 0 0 chr17 36524963 36525003 -52979550 + (A)n Simple_repeat Simple_repeat 1 40 0 431 250 19 28 chr17 36525279 36525387 -52979166 + MIR SINE MIR 2 108 -154 * 1433 274 124 31 chr17 36525309 36525922 -52978631 + L2 LINE L2 2112 2781 -533 333 0 0 0 chr17 36526055 36526092 -52978461 + (TG)n Simple_repeat Simple_repeat 2 38 0 356 223 114 60 chr17 36526296 36526462 -52978091 - MER5A DNA MER1_type -3 186 12 486 279 42 82 chr17 36527113 36527805 -52976748 - L1MEd LINE L1 -4618 1513 962 690 214 0 0 chr17 36527828 36527954 -52976599 - FLAM_C SINE Alu -17 126 1 425 289 18 0 chr17 36528075 36528189 -52976364 - L2 LINE L2 -8 3305 3190 622 318 52 9 chr17 36528191 36528424 -52976129 - L1MEd LINE L1 -5316 803 561 4678 213 42 19 chr17 36528599 36530560 -52973993 - L1MB4 LINE L1 -29 6151 4075 275 70 0 23 chr17 36531157 36531200 -52973353 + (GA)n Simple_repeat Simple_repeat 1 42 0 209 300 0 0 chr17 36531886 36531936 -52972617 - L2 LINE L2 -83 3189 3140 180 277 0 0 chr17 36531975 36532022 -52972531 - L2 LINE L2 -87 3226 3180 454 309 28 60 chr17 36532311 36532528 -52972025 - L1MC4 LINE L1 -6 8036 7827 1521 224 120 28 chr17 36532553 36532798 -52971755 - L1ME2 LINE L1 -13 6151 5930 1512 177 56 0 chr17 36532798 36533090 -52971463 - AluJb SINE Alu 0 308 2 1521 224 120 28 chr17 36533090 36533375 -52971178 - L1ME2 LINE L1 -234 5930 5569 * 4626 243 90 34 chr17 36533361 36535235 -52969318 - L1ME2 LINE L1 -795 5351 3240 2801 10 0 0 chr17 36535395 36535707 -52968846 - AluYb8 SINE Alu -6 312 1 231 276 221 21 chr17 36536156 36536301 -52968252 + L2 LINE L2 3140 3313 0 320 331 126 11 chr17 36536688 36536894 -52967659 - MIR SINE MIR 0 262 34 194 365 40 0 chr17 36537015 36537089 -52967464 + L2 LINE L2 2893 2969 -345 189 121 0 0 chr17 36537452 36537485 -52967068 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1424 231 33 17 chr17 36537488 36537847 -52966706 - MLT1A1 LTR MaLR 0 365 1 755 219 107 16 chr17 36537864 36538056 -52966497 - MIR SINE MIR -35 227 23 642 321 37 20 chr17 36538080 36538326 -52966227 - MIR SINE MIR 0 262 13 366 356 88 21 chr17 36538345 36538539 -52966014 - L3 LINE CR1 -6 1571 1365 223 357 89 0 chr17 36539102 36539214 -52965339 - MIR3 SINE MIR -21 187 66 185 222 0 0 chr17 36539221 36539257 -52965296 + L2 LINE L2 3276 3311 -2 * 572 283 114 59 chr17 36539256 36539455 -52965098 - L3 LINE CR1 -1 1576 1355 2040 140 58 0 chr17 36539455 36539784 -52964769 - MER7A DNA MER2_type 0 346 1 572 283 114 59 chr17 36539784 36539874 -52964679 - L3 LINE CR1 -222 1355 1271 2282 121 36 36 chr17 36540085 36540449 -52964104 + THE1B LTR MaLR 1 364 0 1604 189 0 10 chr17 36542594 36542900 -52961653 + AluJo SINE Alu 1 303 -9 534 230 101 40 chr17 36543135 36543283 -52961270 + MIR SINE MIR 49 205 -57 702 272 23 37 chr17 36543288 36543505 -52961048 - MER21B LTR ERV1 -77 786 573 4199 111 44 47 chr17 36543509 36544229 -52960324 - LTR8A LTR ERV1 -3 724 7 1744 221 58 103 chr17 36544245 36544830 -52959723 - MER21B LTR ERV1 -289 574 16 289 158 18 18 chr17 36544835 36544892 -52959661 + Tigger5 DNA MER2_type 23 79 -2244 883 146 0 22 chr17 36545087 36545224 -52959329 - AluJo SINE Alu -178 134 1 270 293 187 49 chr17 36545224 36545593 -52958960 - L2 LINE L2 -6 3266 2847 1920 60 4 22 chr17 36546240 36546508 -52958045 - L1PA7 LINE L1 -421 5733 5471 3310 49 5 2 chr17 36546508 36546932 -52957621 + L1PA7 LINE L1 5725 6151 -3 1019 277 55 13 chr17 36547593 36548082 -52956471 - L2 LINE L2 -38 3275 2759 660 294 77 13 chr17 36548618 36548853 -52955700 + MIR SINE MIR 12 261 -1 278 325 76 6 chr17 36549180 36549337 -52955216 + MIR3 SINE MIR 9 176 -32 204 67 0 0 chr17 36549368 36549398 -52955155 + (A)n Simple_repeat Simple_repeat 1 30 0 493 321 40 27 chr17 36551185 36551409 -52953144 + MIR SINE MIR 8 234 -28 208 395 28 18 chr17 36551476 36551585 -52952968 + L2 LINE L2 3163 3272 0 820 283 207 6 chr17 36552089 36552585 -52951968 + L2 LINE L2 2732 3313 0 782 279 66 26 chr17 36553649 36554079 -52950474 + L2 LINE L2 2755 3201 -112 458 206 47 0 chr17 36554084 36554191 -52950362 + MLT1D LTR MaLR 393 504 -1 260 339 17 9 chr17 36554971 36555086 -52949467 + MIR SINE MIR 37 152 -110 741 239 112 16 chr17 36555088 36555339 -52949214 + MER46C DNA MER2_type 1 275 -63 456 281 43 0 chr17 36555436 36555575 -52948978 - MIR SINE MIR -69 193 49 532 198 0 0 chr17 36555879 36555975 -52948578 - FRAM SINE Alu -81 95 1 227 267 17 0 chr17 36556464 36556524 -52948029 + L3 LINE CR1 715 775 -802 394 276 218 46 chr17 36556525 36556920 -52947633 + L3 LINE CR1 740 1202 -375 1745 117 84 44 chr17 36556984 36557169 -52947384 - AluJb SINE Alu -2 310 107 2327 97 0 0 chr17 36557169 36557457 -52947096 - AluSx SINE Alu -11 301 14 1745 117 84 44 chr17 36557457 36557569 -52946984 - AluJb SINE Alu -205 107 1 196 238 0 0 chr17 36557634 36557676 -52946877 + L3b LINE CR1 1345 1386 -197 1907 183 36 21 chr17 36558798 36559218 -52945335 + MSTB LTR MaLR 1 426 0 237 316 53 9 chr17 36559510 36559624 -52944929 - L3 LINE CR1 -101 1476 1358 254 262 60 54 chr17 36559740 36559889 -52944664 + MIR SINE MIR 28 177 -85 545 295 13 62 chr17 36559890 36560114 -52944439 + MIR SINE MIR 2 214 -48 759 226 24 0 chr17 36560114 36560282 -52944271 + MIR SINE MIR 90 261 -1 186 143 0 0 chr17 36560974 36561009 -52943544 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 422 224 215 48 chr17 36561185 36561409 -52943144 - MIR SINE MIR 0 262 5 243 213 164 0 chr17 36561728 36561789 -52942764 + L2 LINE L2 3199 3269 -3 836 205 47 64 chr17 36562167 36562464 -52942089 - LTR37A LTR ERV1 -2 424 133 265 316 21 0 chr17 36562904 36562999 -52941554 + GA-rich Low_complexity Low_complexity 1 97 0 2609 25 0 0 chr17 36563094 36563408 -52941145 + L1PA2 LINE L1 5842 6155 0 296 312 70 32 chr17 36563470 36563656 -52940897 + L2 LINE L2 2890 3082 -190 341 286 30 23 chr17 36563673 36563806 -52940747 + MIR SINE MIR 1 134 -128 252 296 0 0 chr17 36564018 36564099 -52940454 + MIR SINE MIR 179 259 -3 245 303 81 0 chr17 36564160 36564259 -52940294 + L2 LINE L2 3202 3308 -5 546 206 36 134 chr17 36565747 36565994 -52938559 + L1MC4 LINE L1 7810 8032 -10 811 208 21 31 chr17 36565995 36566187 -52938366 + AluJo SINE Alu 123 312 0 2421 82 0 7 chr17 36567142 36567446 -52937107 - AluSp SINE Alu -11 302 1 747 255 118 5 chr17 36567594 36567806 -52936747 + MIR SINE MIR 27 262 0 383 299 76 0 chr17 36568152 36568296 -52936257 + MIR SINE MIR 57 211 -51 207 114 0 0 chr17 36569047 36569082 -52935471 + (CCGCG)n Simple_repeat Simple_repeat 1 35 0 583 139 106 15 chr17 36570389 36570535 -52934018 + MER33 DNA MER1_type 1 155 -88 1535 147 99 0 chr17 36570535 36570808 -52933745 + Tigger3(Golem) DNA MER2_type 6 305 -2724 1201 108 0 0 chr17 36570829 36570987 -52933566 - AluSg/x SINE Alu -22 290 133 2294 89 0 0 chr17 36570989 36571269 -52933284 - AluSq SINE Alu -12 301 22 2075 116 0 0 chr17 36571369 36571645 -52932908 + AluSx SINE Alu 32 307 -5 180 0 0 0 chr17 36571664 36571684 -52932869 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1806 142 59 0 chr17 36571729 36572017 -52932536 - AluJb SINE Alu -2 310 6 250 286 43 0 chr17 36572120 36572190 -52932363 + MIR SINE MIR 177 249 -13 * 269 176 39 0 chr17 36572156 36572207 -52932346 + L2 LINE L2 3261 3313 0 1032 201 11 185 chr17 36572247 36572602 -52931951 - MLT1B LTR MaLR 0 390 -25 1721 188 3 31 chr17 36572602 36572921 -52931632 + AluJo SINE Alu 1 310 -2 1032 201 11 185 chr17 36572921 36572984 -52931569 - MLT1B LTR MaLR -415 4294967271 37 1443 97 65 0 chr17 36572984 36573200 -52931353 + MER30 DNA MER1_type 1 230 0 1032 201 11 185 chr17 36573200 36573233 -52931320 - MLT1B LTR MaLR -352 38 1 673 338 136 5 chr17 36573233 36573674 -52930879 - L2 LINE L2 -348 2966 2468 251 116 337 35 chr17 36573729 36573815 -52930738 + MIR SINE MIR 116 227 -35 1951 137 0 7 chr17 36573908 36574242 -52930311 - AluSx SINE Alu 0 332 1 575 327 6 0 chr17 36575181 36575346 -52929207 + MIR3 SINE MIR 14 179 -29 212 163 0 0 chr17 36575575 36575618 -52928935 + A-rich Low_complexity Low_complexity 1 43 0 980 126 34 17 chr17 36575932 36576107 -52928446 + MER96B DNA MER1_type? 2 179 -238 200 293 170 0 chr17 36576529 36576635 -52927918 - L2 LINE L2 0 3272 3149 1823 149 0 0 chr17 36577028 36577297 -52927256 - AluSx SINE Alu -4 308 40 2295 105 0 0 chr17 36577561 36577846 -52926707 - AluSg SINE Alu -25 285 1 334 213 27 40 chr17 36577847 36577922 -52926631 + L1MCa LINE L1 1995 2068 -4358 * 384 320 0 0 chr17 36577871 36577979 -52926574 - L1MC4 LINE L1 -1339 6703 6614 23 0 0 0 chr17 36578091 36578114 -52926439 + AT_rich Low_complexity Low_complexity 1 23 0 1057 155 25 0 chr17 36578669 36578830 -52925723 - AluSg/x SINE Alu -14 296 132 2393 86 10 3 chr17 36578830 36579134 -52925419 - AluSx SINE Alu -6 306 1 235 244 183 52 chr17 36579161 36579276 -52925277 + MIR3 SINE MIR 33 162 -46 1847 163 0 33 chr17 36579276 36579582 -52924971 - AluJb SINE Alu -16 296 1 504 313 7 13 chr17 36579661 36579811 -52924742 + MER117 DNA MER1_type 1 149 -48 536 286 37 6 chr17 36581833 36581994 -52922559 - MIR3 SINE MIR -40 168 3 612 165 0 0 chr17 36582032 36582135 -52922418 - AluSq/x SINE Alu -207 105 3 2091 136 19 3 chr17 36582137 36582511 -52922042 + L1MB3 LINE L1 5804 6183 0 2075 116 3 11 chr17 36582863 36583147 -52921406 - AluSx SINE Alu -30 282 1 1037 318 73 13 chr17 36583738 36583899 -52920654 - L3 LINE CR1 -3 1574 1424 2216 120 0 0 chr17 36583899 36584241 -52920312 + AluSg SINE Alu 1 342 0 1037 318 73 13 chr17 36584241 36584541 -52920012 - L3 LINE CR1 -153 1424 1084 493 323 35 25 chr17 36584784 36584982 -52919571 + MIR SINE MIR 15 214 -48 296 47 0 23 chr17 36586911 36586954 -52917599 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 186 189 0 0 chr17 36587189 36587226 -52917327 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 2278 100 0 0 chr17 36587414 36587718 -52916835 - AluSg SINE Alu 0 304 1 188 250 0 21 chr17 36587772 36587820 -52916733 + L2 LINE L2 3208 3254 -59 1007 131 0 0 chr17 36587924 36588061 -52916492 - AluJb SINE Alu -175 137 1 996 169 6 0 chr17 36588116 36588276 -52916277 + AluJb SINE Alu 149 309 -3 478 145 0 0 chr17 36588472 36588548 -52916005 + L1ME1 LINE L1 5913 5988 -178 264 223 85 11 chr17 36588551 36588645 -52915908 + L1ME1 LINE L1 6061 6161 -5 2467 91 3 0 chr17 36589417 36589726 -52914827 + AluSx SINE Alu 1 310 -2 1720 145 14 42 chr17 36590021 36590304 -52914249 - AluSx SINE Alu -37 275 1 832 158 0 0 chr17 36590456 36590589 -52913964 - FLAM_C SINE Alu 0 133 1 401 172 46 11 chr17 36590590 36590677 -52913876 + MLT1F LTR MaLR 442 531 -11 340 330 0 9 chr17 36590726 36590838 -52913715 + MIR SINE MIR 36 146 -62 871 205 0 0 chr17 36590919 36591075 -52913478 - FRAM SINE Alu -10 156 1 524 305 23 42 chr17 36591280 36591620 -52912933 + MLT1L LTR MaLR 20 421 -194 183 375 50 12 chr17 36591754 36591834 -52912719 - L2 LINE L2 -63 3209 3127 362 266 139 0 chr17 36592205 36592378 -52912175 + MER117 DNA MER1_type 1 197 0 180 0 0 0 chr17 36593384 36593404 -52911149 + (CAA)n Simple_repeat Simple_repeat 2 21 0 288 216 137 49 chr17 36593413 36593515 -52911038 - L1MD2 LINE L1 -21 6338 6228 841 128 0 24 chr17 36593524 36593649 -52910904 + FLAM_A SINE Alu 20 141 -1 4086 170 37 26 chr17 36593652 36593982 -52910571 - L1MD2 LINE L1 -122 6237 5912 2414 106 0 0 chr17 36593982 36594293 -52910260 - AluSx SINE Alu -1 311 1 4086 170 37 26 chr17 36594293 36594798 -52909755 - L1MD2 LINE L1 -447 5912 5393 2438 88 3 0 chr17 36594798 36595093 -52909460 - AluSp SINE Alu -17 296 1 1829 152 0 37 chr17 36595093 36595388 -52909165 - AluJb SINE Alu -16 296 13 1414 219 94 13 chr17 36595389 36595837 -52908716 - L1MD2 LINE L1 -814 5332 4849 840 100 0 18 chr17 36595839 36595949 -52908604 + AluJ SINE Alu 24 131 -181 2053 89 22 0 chr17 36595951 36596222 -52908331 + AluSq SINE Alu 1 277 -36 2105 84 94 7 chr17 36596223 36596509 -52908044 + AluSp SINE Alu 1 311 -2 1065 149 0 28 chr17 36596524 36596705 -52907848 + AluJ SINE Alu 120 295 -17 1643 229 25 71 chr17 36596705 36597191 -52907362 - L1MD2 LINE L1 -1291 4855 4348 2239 90 4 0 chr17 36597191 36597502 -52907051 - AluY SINE Alu 0 312 1 2123 143 7 0 chr17 36597503 36597804 -52906749 - AluSx SINE Alu -9 303 1 1643 229 25 71 chr17 36597804 36597947 -52906606 - L1MD2 LINE L1 -1797 4349 4252 325 222 78 0 chr17 36597965 36598055 -52906498 + L2 LINE L2 3201 3297 -16 2429 84 3 0 chr17 36598398 36598695 -52905858 - AluSx SINE Alu -14 298 1 813 198 0 39 chr17 36598883 36599065 -52905488 + MER5A DNA MER1_type 14 188 -1 208 140 60 60 chr17 36599072 36599117 -52905436 + MER5B DNA MER1_type 2 47 -127 2563 58 0 0 chr17 36599117 36599410 -52905143 + AluY SINE Alu 1 293 -18 468 243 110 0 chr17 36599428 36599463 -52905090 + MER5B DNA MER1_type 28 58 -120 684 175 16 74 chr17 36599463 36599528 -52905025 - MER5B DNA MER1_type 0 178 111 1948 139 9 35 chr17 36599528 36599845 -52904708 + AluJo SINE Alu 1 309 -3 684 175 16 74 chr17 36599845 36599968 -52904585 - MER5B DNA MER1_type -67 111 1 468 243 110 0 chr17 36599968 36600068 -52904485 + MER5B DNA MER1_type 58 178 0 423 240 40 0 chr17 36600549 36600649 -52903904 - MER103 DNA DNA -62 104 1 2283 88 7 7 chr17 36600714 36601008 -52903545 + AluSc SINE Alu 1 294 -15 604 35 0 24 chr17 36601114 36601199 -52903354 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 210 71 0 0 chr17 36601255 36601283 -52903270 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 501 272 19 105 chr17 36601527 36601666 -52902887 + MIR SINE MIR 17 127 -135 2353 81 0 0 chr17 36601666 36601979 -52902574 - AluY SINE Alu 0 313 1 501 272 19 105 chr17 36601979 36602095 -52902458 + MIR SINE MIR 127 251 -11 189 350 120 0 chr17 36602328 36602445 -52902108 + L2 LINE L2 3175 3305 -8 1919 118 14 44 chr17 36602687 36602984 -52901569 - AluSx SINE Alu -22 290 3 202 271 198 0 chr17 36603111 36603173 -52901380 + MIR SINE MIR 138 252 -10 228 88 29 0 chr17 36603173 36603207 -52901346 + L2 LINE L2 3222 3256 -16 1304 140 0 22 chr17 36603295 36603517 -52901036 + MER20 DNA MER1_type 1 217 -2 2221 110 0 23 chr17 36603926 36604235 -52900318 - AluSx SINE Alu -10 302 1 1921 125 6 51 chr17 36605461 36605774 -52898779 - AluJb SINE Alu -13 299 1 31 0 0 0 chr17 36605776 36605807 -52898746 + AT_rich Low_complexity Low_complexity 1 31 0 610 201 101 34 chr17 36605905 36606084 -52898469 - MIR SINE MIR -55 207 17 225 306 16 0 chr17 36606562 36606624 -52897929 - MIR3 SINE MIR -10 198 136 444 118 0 0 chr17 36607105 36607173 -52897380 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 1929 141 7 23 chr17 36607173 36607343 -52897210 - AluJb SINE Alu -13 299 135 459 0 0 0 chr17 36607343 36607394 -52897159 + (TA)n Simple_repeat Simple_repeat 1 51 0 1929 141 7 23 chr17 36607394 36607522 -52897031 - AluJb SINE Alu -177 135 6 542 240 34 120 chr17 36607921 36608271 -52896282 - L2 LINE L2 -5 3267 2948 770 238 18 6 chr17 36608292 36608456 -52896097 + MER45A DNA AcHobo 13 178 0 291 315 65 65 chr17 36608556 36608641 -52895912 + MIR SINE MIR 28 112 -150 2002 133 0 25 chr17 36608641 36608927 -52895626 + AluSx SINE Alu 1 279 -33 186 71 0 0 chr17 36608927 36608955 -52895598 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 291 315 65 65 chr17 36608955 36609068 -52895485 + MIR SINE MIR 110 227 -35 766 245 29 29 chr17 36609356 36609433 -52895120 - MER112 DNA MER1_type -16 244 168 2249 85 4 4 chr17 36609433 36609737 -52894816 + AluSc SINE Alu 1 304 0 766 245 29 29 chr17 36609737 36609899 -52894654 - MER112 DNA MER1_type -91 169 4 2297 122 0 0 chr17 36609951 36610263 -52894290 + AluSx SINE Alu 1 312 0 341 310 191 8 chr17 36610295 36610354 -52894199 + L1ME3A LINE L1 5683 5730 -440 1588 152 130 4 chr17 36610354 36610624 -52893929 + AluJb SINE Alu 1 304 -8 341 310 191 8 chr17 36610624 36610793 -52893760 + L1ME3A LINE L1 5730 5952 -218 362 253 0 33 chr17 36610963 36611054 -52893499 + L1MC5 LINE L1 7838 7925 -36 2187 129 0 3 chr17 36611105 36611407 -52893146 - AluSx SINE Alu -11 301 1 247 307 15 36 chr17 36611475 36611612 -52892941 - Charlie7 DNA MER1_type -2471 141 8 285 291 133 46 chr17 36611633 36611683 -52892870 + MER5A DNA MER1_type 4 48 -141 2278 119 3 0 chr17 36611683 36611985 -52892568 - AluSg SINE Alu -7 303 1 285 291 133 46 chr17 36611985 36612085 -52892468 + MER5A DNA MER1_type 48 167 -22 413 252 114 8 chr17 36613063 36613186 -52891367 - MER5A DNA MER1_type -53 136 1 711 228 16 36 chr17 36613396 36613589 -52890964 + MER5A DNA MER1_type 1 189 0 319 266 149 0 chr17 36613687 36613820 -52890733 + MIR SINE MIR 16 183 -25 184 244 0 0 chr17 36613789 36613830 -52890723 + L3 LINE CR1 1526 1566 -11 * 3610 116 8 0 chr17 36613845 36614361 -52890192 - MER1A DNA MER1_type -9 520 1 186 230 184 0 chr17 36616227 36616314 -52888239 + MIR SINE MIR 31 133 -129 250 243 54 0 chr17 36616901 36616975 -52887578 + MER3 DNA MER1_type 1 78 -131 198 296 0 0 chr17 36617991 36618035 -52886518 - MIR SINE MIR -190 72 29 350 265 109 41 chr17 36618764 36618911 -52885642 - MER5B DNA MER1_type 0 178 22 307 284 49 0 chr17 36619071 36619173 -52885380 + MIR SINE MIR 77 183 -79 627 201 151 0 chr17 36619310 36619469 -52885084 - MER5A DNA MER1_type 0 189 7 2184 136 0 0 chr17 36619590 36619885 -52884668 - AluSx SINE Alu -17 295 1 222 254 34 0 chr17 36620002 36620061 -52884492 - MIR SINE MIR -142 120 60 222 253 169 12 chr17 36620416 36620499 -52884054 + MIR3 SINE MIR 15 110 -98 227 288 0 15 chr17 36620595 36620661 -52883892 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 273 229 193 0 chr17 36622780 36622863 -52881690 + L2 LINE L2 3174 3272 0 375 307 60 104 chr17 36622946 36623153 -52881400 - MIR SINE MIR -1 261 74 949 138 0 133 chr17 36623153 36623300 -52881253 + MER5A DNA MER1_type 1 111 -78 2112 147 10 0 chr17 36623300 36623607 -52880946 - AluSx SINE Alu -2 310 1 949 138 0 133 chr17 36623607 36623677 -52880876 + MER5A DNA MER1_type 111 189 0 375 307 60 104 chr17 36623677 36623723 -52880830 - MIR SINE MIR -188 74 28 979 167 14 76 chr17 36623858 36624068 -52880485 + AluJo SINE Alu 98 294 -18 258 215 62 0 chr17 36624413 36624478 -52880075 - MIR SINE MIR -115 147 79 2252 91 0 3 chr17 36625084 36625392 -52879161 - AluSx SINE Alu 0 307 1 2259 120 3 0 chr17 36625452 36625753 -52878800 - AluSx SINE Alu -10 302 1 310 278 52 26 chr17 36625979 36626094 -52878459 - MER5A DNA MER1_type -22 167 50 2385 59 3 30 chr17 36626148 36626475 -52878078 + AluSc SINE Alu 1 319 0 268 319 133 7 chr17 36626497 36626632 -52877921 + MIR SINE MIR 49 200 -62 21 36 0 0 chr17 36627096 36627124 -52877429 + GC_rich Low_complexity Low_complexity 1 28 0 1558 154 7 48 chr17 36627423 36627716 -52876837 - AluJo SINE Alu -21 291 11 1599 106 0 5 chr17 36627816 36628024 -52876529 + AluSg/x SINE Alu 84 290 -20 255 299 162 0 chr17 36628067 36628308 -52876245 - L1ME4a LINE L1 -16 6105 5826 255 263 84 0 chr17 36628456 36628551 -52876002 - L1ME4a LINE L1 -292 5829 5727 871 86 0 0 chr17 36628607 36628751 -52875802 - AluSx SINE Alu 0 321 178 1157 80 0 0 chr17 36628752 36628890 -52875663 - AluSx SINE Alu -174 138 1 654 301 60 34 chr17 36628890 36629242 -52875311 - L1ME4a LINE L1 -449 5672 5312 1719 186 37 0 chr17 36629262 36629558 -52874995 - AluJo SINE Alu -5 307 1 242 206 46 86 chr17 36629663 36629799 -52874754 - MLT1G3 LTR MaLR -232 363 158 649 277 71 25 chr17 36629920 36630202 -52874351 - L3 LINE CR1 -140 1437 1143 305 213 250 0 chr17 36630487 36630595 -52873958 + L3 LINE CR1 1373 1507 -70 2838 79 2 83 chr17 36631321 36631817 -52872736 - MER4C LTR ERV1 0 465 10 1927 142 14 10 chr17 36631831 36632126 -52872427 - AluJo SINE Alu -16 296 1 2950 208 39 47 chr17 36633002 36633743 -52870810 + MER21B LTR ERV1 5 739 -124 690 129 45 30 chr17 36633840 36633972 -52870581 - FLAM_C SINE Alu -4 139 6 1423 113 44 10 chr17 36633984 36634188 -52870365 - AluSq SINE Alu -19 294 84 675 290 59 35 chr17 36634350 36634605 -52869948 + MIR SINE MIR 2 262 0 183 300 38 38 chr17 36634670 36634750 -52869803 + L2 LINE L2 3129 3208 -64 482 211 57 6 chr17 36634913 36635060 -52869493 - MIR SINE MIR -3 259 105 378 290 142 0 chr17 36635096 36635251 -52869302 - MIR3 SINE MIR -12 196 20 2238 210 72 11 chr17 36635589 36636113 -52868440 - MLT1F1 LTR MaLR 0 567 12 819 154 80 6 chr17 36636113 36636275 -52868278 - FAM SINE Alu -1 174 1 1648 142 95 22 chr17 36636278 36636552 -52868001 - AluJo SINE Alu -18 294 1 254 232 93 28 chr17 36636781 36636888 -52867665 - MER5A DNA MER1_type -42 147 23 434 159 1 13 chr17 36636930 36637018 -52867535 - MER58 DNA MER1_type 0 2420 128 2355 108 0 3 chr17 36637044 36637351 -52867202 + AluSx SINE Alu 1 306 -6 1741 168 0 54 chr17 36637357 36637672 -52866881 + AluJo SINE Alu 1 298 -14 272 255 31 20 chr17 36638169 36638267 -52866286 - MIR3 SINE MIR -107 101 3 897 254 181 6 chr17 36638606 36638737 -52865816 + LTR16A LTR ERVL 62 169 -281 1650 189 24 7 chr17 36638737 36639028 -52865525 + AluJo SINE Alu 11 306 -6 897 254 181 6 chr17 36639028 36639227 -52865326 + LTR16A LTR ERVL 169 450 0 563 257 69 6 chr17 36639231 36639406 -52865147 - MIR SINE MIR -64 198 13 2262 119 0 19 chr17 36640077 36640395 -52864158 - AluSx SINE Alu 0 312 1 2001 97 3 85 chr17 36640400 36640729 -52863824 - AluSx SINE Alu -9 303 2 285 421 0 7 chr17 36641017 36641162 -52863391 - L2 LINE L2 -195 3077 2934 216 0 0 0 chr17 36641918 36641942 -52862611 + (A)n Simple_repeat Simple_repeat 1 24 0 1908 168 0 3 chr17 36641942 36642245 -52862308 + AluJb SINE Alu 1 302 -10 240 245 126 66 chr17 36643380 36643531 -52861022 - L1ME4a LINE L1 -3 6118 5959 2202 137 3 0 chr17 36643631 36643937 -52860616 - AluSx SINE Alu -5 307 1 2124 168 67 45 chr17 36644444 36644505 -52860048 - MLT1D LTR MaLR 0 505 447 2354 107 3 0 chr17 36644505 36644814 -52859739 - AluSx SINE Alu -2 310 1 2124 168 67 45 chr17 36644814 36645203 -52859350 - MLT1D LTR MaLR -58 447 41 2419 78 3 0 chr17 36645203 36645499 -52859054 - AluY SINE Alu -14 297 1 2124 168 67 45 chr17 36645499 36645541 -52859012 - MLT1D LTR MaLR -464 41 1 1832 186 0 0 chr17 36645926 36646238 -52858315 + AluJo SINE Alu 1 312 0 830 171 18 15 chr17 36646252 36646569 -52857984 + GA-rich Low_complexity Low_complexity 1 318 0 403 293 70 8 chr17 36646812 36647054 -52857499 - L2 LINE L2 -212 3060 2804 400 329 105 9 chr17 36647655 36647874 -52856679 + MIR SINE MIR 21 260 -2 1462 125 0 0 chr17 36647891 36648099 -52856454 + AluSp SINE Alu 106 313 0 273 279 193 7 chr17 36648654 36648794 -52855759 + MIR SINE MIR 47 212 -50 2156 130 0 9 chr17 36649190 36649588 -52854965 - AluSx SINE Alu 0 395 1 8074 48 7 12 chr17 36649608 36650740 -52853813 - L1P2 LINE L1 -678 5476 4357 4766 53 28 13 chr17 36650686 36651304 -52853249 + L1PA6 LINE L1 5528 6154 0 * 698 239 80 32 chr17 36651371 36651622 -52852931 - MLT1K LTR MaLR -7 581 319 324 0 0 0 chr17 36651642 36651678 -52852875 + (GA)n Simple_repeat Simple_repeat 1 36 0 238 273 122 29 chr17 36651708 36651847 -52852706 - MLT1K LTR MaLR -352 236 85 1955 153 0 0 chr17 36652897 36653172 -52851381 + AluSx SINE Alu 1 275 -37 571 254 155 68 chr17 36653407 36653512 -52851041 - MLT1J2 LTR MaLR -19 431 337 2331 84 0 7 chr17 36653512 36653809 -52850744 - AluSc SINE Alu -14 295 1 571 254 155 68 chr17 36653809 36654057 -52850496 - MLT1J2 LTR MaLR -113 337 47 193 125 0 0 chr17 36654690 36654722 -52849831 - L2 LINE L2 -217 3055 3024 283 222 167 22 chr17 36655759 36655849 -52848704 - MER5A DNA MER1_type -6 183 81 770 201 72 31 chr17 36655964 36656189 -52848364 - MIR SINE MIR -22 240 1 2348 95 0 19 chr17 36656710 36657026 -52847527 - AluSg SINE Alu 0 310 1 415 273 147 4 chr17 36657073 36657262 -52847291 - MIR SINE MIR -13 249 30 1045 199 61 132 chr17 36657265 36657691 -52846862 - MSTD LTR MaLR 0 396 1 939 279 81 70 chr17 36658613 36659130 -52845423 - MLT1K LTR MaLR -43 545 23 1319 133 13 49 chr17 36659888 36660113 -52844440 - AluJo SINE Alu -11 301 85 489 182 25 119 chr17 36660997 36661156 -52843397 + L1M4 LINE L1 3427 3570 -2576 1014 108 7 0 chr17 36661165 36661304 -52843249 - AluJb SINE Alu -6 306 167 681 124 177 0 chr17 36661417 36661530 -52843023 - AluJb SINE Alu -178 134 2 1694 261 78 2 chr17 36661539 36662102 -52842451 + L1M4 LINE L1 3576 4181 -1965 29 0 0 0 chr17 36663456 36663485 -52841068 + AT_rich Low_complexity Low_complexity 1 29 0 1137 157 25 15 chr17 36663510 36663707 -52840846 - L1PB4 LINE L1 -7 6149 5951 9958 42 14 131 chr17 36665898 36667433 -52837120 - SVA Other Other 0 1386 32 225 0 0 0 chr17 36667438 36667463 -52837090 + (GGGAGA)n Simple_repeat Simple_repeat 1 25 0 952 139 377 9 chr17 36667537 36667752 -52836801 - AluJo SINE Alu -8 304 11 291 111 0 0 chr17 36667841 36667886 -52836667 - LOR1a LTR ERV1 -214 283 239 1506 114 36 293 chr17 36667903 36668608 -52835945 - L1 LINE L1 -840 5306 4795 269 31 0 0 chr17 36668608 36668640 -52835913 - U2 snRNA snRNA -156 32 1 1506 114 36 293 chr17 36668640 36668713 -52835840 - L1 LINE L1 -1351 4795 4705 189 0 0 0 chr17 36668781 36668802 -52835751 + (T)n Simple_repeat Simple_repeat 1 21 0 1009 201 126 31 chr17 36668825 36669079 -52835474 - AluJo SINE Alu -14 298 21 44350 46 1 4 chr17 36669137 36670640 -52833913 - L1PA4 LINE L1 0 6155 4650 8236 82 7 8 chr17 36670640 36671713 -52832840 + MER11C LTR ERVK 1 1071 0 44350 46 1 4 chr17 36671713 36676379 -52828174 - L1PA4 LINE L1 -1505 4650 1 1484 224 90 61 chr17 36676383 36676907 -52827646 - L1 LINE L1 -1537 4609 4057 1716 163 69 107 chr17 36676907 36677114 -52827439 + MSTB1 LTR MaLR 1 214 -218 1711 181 0 27 chr17 36677114 36677413 -52827140 - AluJo SINE Alu -17 295 5 1716 163 69 107 chr17 36677413 36677654 -52826899 + MSTB1 LTR MaLR 214 432 0 1484 224 90 61 chr17 36677654 36677838 -52826715 - L1 LINE L1 -2089 4057 3880 227 171 0 0 chr17 36677839 36677880 -52826673 + CT-rich Low_complexity Low_complexity 2 42 0 643 162 147 0 chr17 36677902 36678038 -52826515 - L1 LINE L1 -2186 3960 3805 * 3933 151 29 80 chr17 36678037 36678593 -52825960 + L1MA7 LINE L1 5341 5714 -469 1825 146 32 14 chr17 36678593 36678874 -52825679 + AluSx SINE Alu 1 286 -26 3933 151 29 80 chr17 36678874 36679320 -52825233 + L1MA7 LINE L1 5714 6181 -2 928 262 92 22 chr17 36679386 36679914 -52824639 + L1ME3A LINE L1 4142 4710 -1436 756 165 0 8 chr17 36679916 36680037 -52824516 + AluJ SINE Alu 2 121 -191 1077 220 42 132 chr17 36680059 36680681 -52823872 + L1ME3A LINE L1 4693 5258 -888 1306 182 0 4 chr17 36680682 36680907 -52823646 + AluJo SINE Alu 85 308 -4 963 208 54 82 chr17 36680907 36681355 -52823198 + L1PA11 LINE L1 5326 6012 -162 * 2334 129 2 77 chr17 36681062 36681479 -52823074 + L1PB3 LINE L1 5749 6134 -20 1793 133 0 56 chr17 36681504 36681827 -52822726 + AluJo SINE Alu 1 305 -7 1338 250 135 46 chr17 36681827 36682449 -52822104 + L1ME3A LINE L1 5475 6155 -15 194 293 0 0 chr17 36682476 36682534 -52822019 + MIR SINE MIR 151 208 -54 903 177 0 32 chr17 36683145 36683303 -52821250 + AluJ SINE Alu 128 280 -32 199 0 65 0 chr17 36683303 36683334 -52821219 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 1941 159 3 7 chr17 36683866 36684167 -52820386 + AluJo SINE Alu 1 300 -12 888 262 258 17 chr17 36685109 36685705 -52818848 - HAL1 LINE L1 -14 2493 1754 215 170 0 57 chr17 36686262 36686315 -52818238 + A-rich Low_complexity Low_complexity 5 54 0 249 172 52 0 chr17 36686547 36686605 -52817948 - L1MD3 LINE L1 0 7995 7935 444 250 0 0 chr17 36686605 36686693 -52817860 - FRAM/FAM SINE Alu -97 88 1 192 277 99 99 chr17 36686735 36686988 -52817565 + L2 LINE L2 2038 2290 -1024 333 370 40 12 chr17 36687008 36687259 -52817294 + L2 LINE L2 2489 2746 -568 208 286 0 0 chr17 36687380 36687436 -52817117 + L2 LINE L2 3258 3313 0 428 292 9 0 chr17 36687580 36687693 -52816860 - L2 LINE L2 -20 3252 3139 2103 177 49 12 chr17 36688028 36688434 -52816119 + MER65C LTR ERV1 2 422 -39 301 137 20 0 chr17 36688479 36688530 -52816023 + MER65B LTR ERV1 480 531 0 323 219 0 0 chr17 36688588 36688652 -52815901 + MER5A DNA MER1_type 40 103 -86 2255 106 30 0 chr17 36688662 36689009 -52815544 - AluSx SINE Alu 0 356 1 2312 125 0 0 chr17 36689016 36689321 -52815232 - AluSx SINE Alu -7 305 1 1707 189 3 12 chr17 36689586 36689908 -52814645 - L1MC1 LINE L1 0 6333 6015 1335 148 5 31 chr17 36690466 36690689 -52813864 - AluJo SINE Alu -12 300 84 326 283 243 0 chr17 36690765 36690917 -52813636 - MIR SINE MIR -67 195 7 1852 142 3 46 chr17 36691172 36691475 -52813078 + AluSx SINE Alu 7 296 -16 1883 161 0 7 chr17 36691855 36692161 -52812392 + AluJo SINE Alu 1 304 0 263 304 201 14 chr17 36692547 36692761 -52811792 - MIR SINE MIR -3 259 6 1081 258 89 42 chr17 36692851 36693052 -52811501 + MLT1H1 LTR MaLR 24 214 -341 2030 103 0 58 chr17 36693052 36693362 -52811191 + AluSq SINE Alu 1 292 -21 1081 258 89 42 chr17 36693362 36693658 -52810895 + MLT1H1 LTR MaLR 214 542 -13 267 219 0 16 chr17 36693675 36693739 -52810814 + MLT1H1-int LTR MaLR 9 71 -1300 237 351 0 0 chr17 36693739 36693816 -52810737 - MIR SINE MIR -139 123 47 222 118 0 0 chr17 36694126 36694160 -52810393 + (CA)n Simple_repeat Simple_repeat 1 34 0 357 195 0 24 chr17 36694178 36694260 -52810293 - L1MC5 LINE L1 -50 7911 7832 358 103 0 128 chr17 36694307 36694385 -52810168 - AluSp/q SINE Alu -1 302 235 459 195 23 62 chr17 36694387 36694515 -52810038 - L1MC5 LINE L1 -177 7784 7662 1126 174 0 46 chr17 36694523 36694741 -52809812 - AluJo SINE Alu -20 292 85 1336 144 0 42 chr17 36694856 36695071 -52809482 - AluJo SINE Alu -106 206 1 796 167 0 8 chr17 36695093 36695219 -52809334 - FLAM_C SINE Alu -8 125 1 186 133 0 0 chr17 36695295 36695325 -52809228 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 619 280 41 12 chr17 36695369 36695640 -52808913 - L1MC5 LINE L1 -377 7584 7306 500 222 215 0 chr17 36695883 36696027 -52808526 - MER5B DNA MER1_type -1 177 3 863 252 26 52 chr17 36696034 36696344 -52808209 - L1MC5 LINE L1 -727 7234 6933 209 318 131 0 chr17 36696865 36696972 -52807581 - MIR SINE MIR -10 252 132 194 0 0 37 chr17 36697435 36697462 -52807091 + (CAAG)n Simple_repeat Simple_repeat 3 28 0 2396 96 0 6 chr17 36697725 36698038 -52806515 - AluSx SINE Alu -1 311 1 1523 229 46 8 chr17 36698320 36698692 -52805861 + MLT1C LTR MaLR 82 467 0 1812 169 31 0 chr17 36698951 36699241 -52805312 - AluSx SINE Alu -11 301 3 1815 167 6 22 chr17 36699717 36700029 -52804524 - AluJb SINE Alu -5 307 1 2008 169 20 31 chr17 36700273 36700664 -52803889 + MLT1B LTR MaLR 1 387 -3 2167 148 120 5 chr17 36700840 36701224 -52803329 - MSTA LTR MaLR 0 428 1 5802 57 16 51 chr17 36701294 36702113 -52802440 - L1PA13 LINE L1 -18 6145 5356 842 222 91 49 chr17 36702129 36702260 -52802293 - L1MC4 LINE L1 0 8042 7918 237 65 0 0 chr17 36702260 36702291 -52802262 + (TCTA)n Simple_repeat Simple_repeat 1 31 0 842 222 91 49 chr17 36702291 36702488 -52802065 - L1MC4 LINE L1 -124 7918 7700 1298 271 51 15 chr17 36702522 36702931 -52801622 - LTR16B LTR ERVL -40 424 1 1959 149 27 0 chr17 36702940 36703235 -52801318 - AluSx SINE Alu -9 303 1 341 339 6 33 chr17 36703355 36703703 -52800850 - MERVL LTR ERVL -153 5332 4555 2254 331 25 12 chr17 36703827 36704801 -52799752 - HERV16 LTR ERVL -826 4828 3843 7092 58 22 0 chr17 36704865 36705837 -52798716 - L1PA7 LINE L1 -8 6146 5168 198 103 0 0 chr17 36705852 36705881 -52798672 + (TTC)n Simple_repeat Simple_repeat 2 30 0 913 191 0 0 chr17 36705888 36706040 -52798513 - FRAM SINE Alu -30 146 1 3835 314 74 22 chr17 36706042 36708205 -52796348 - HERV16 LTR ERVL -1658 3827 1567 1027 283 11 34 chr17 36708252 36708602 -52795951 - HERV16 LTR ERVL -3569 1427 1086 581 276 51 12 chr17 36708611 36708905 -52795648 - LTR16B LTR ERVL -114 350 12 699 208 72 86 chr17 36708905 36709046 -52795507 - L1MC4 LINE L1 -326 7716 7575 794 159 0 15 chr17 36709046 36709178 -52795375 - FLAM_A SINE Alu 0 133 4 699 208 72 86 chr17 36709178 36709426 -52795127 - L1MC4 LINE L1 -467 7575 7259 2376 84 0 22 chr17 36710252 36710563 -52793990 + AluY SINE Alu 1 304 -7 352 0 42 0 chr17 36710655 36710703 -52793850 + (GA)n Simple_repeat Simple_repeat 1 50 0 1583 154 6 69 chr17 36711175 36711363 -52793190 - AluJo SINE Alu -14 298 135 2015 129 0 4 chr17 36711363 36711670 -52792883 + AluSg SINE Alu 1 306 0 1583 154 6 69 chr17 36711670 36711798 -52792755 - AluJo SINE Alu -177 135 1 191 36 36 0 chr17 36713498 36713526 -52791027 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 239 245 21 53 chr17 36714531 36714625 -52789928 - LTR31 LTR ERV1 -79 540 450 1407 95 9 81 chr17 36715313 36715535 -52789018 + AluSx SINE Alu 1 206 -106 2038 174 93 19 chr17 36715684 36716190 -52788363 - Tigger7 DNA MER2_type -1 2486 2 3053 211 32 38 chr17 36716237 36716954 -52787599 - L1ME1 LINE L1 -247 5919 5199 1186 98 21 36 chr17 36716954 36717148 -52787405 - L1PA11 LINE L1 0 6174 5984 3053 211 32 38 chr17 36717148 36717242 -52787311 - L1ME1 LINE L1 -967 5199 5119 2103 120 3 3 chr17 36717242 36717541 -52787012 + AluSx SINE Alu 1 299 -13 3053 211 32 38 chr17 36717541 36717635 -52786918 - L1ME1 LINE L1 -1047 5119 5026 1957 209 19 8 chr17 36717635 36718086 -52786467 + MER89 LTR ERV1 1 555 -4 7339 200 83 92 chr17 36718404 36719216 -52785337 + MER89-int LTR ERV1 290 1108 -5693 338 87 0 0 chr17 36719216 36719262 -52785291 + MADE1 DNA Mariner 1 46 -34 7339 200 83 92 chr17 36719262 36720679 -52783874 + MER89-int LTR ERV1 1108 2543 -4258 3247 242 53 62 chr17 36720698 36721088 -52783465 + MER89-int LTR ERV1 110 502 -6299 2478 34 14 14 chr17 36721088 36721384 -52783169 + AluY SINE Alu 1 296 -15 3247 242 53 62 chr17 36721384 36722097 -52782456 + MER89-int LTR ERV1 502 3358 -3443 2639 46 3 0 chr17 36722106 36722412 -52782141 - AluY SINE Alu -2 309 3 1993 105 0 0 chr17 36722414 36722671 -52781882 - AluSx SINE Alu -2 310 54 584 197 17 101 chr17 36722674 36722852 -52781701 + MER89-int LTR ERV1 4127 4289 -2512 1756 167 27 10 chr17 36722862 36723156 -52781397 + AluJo SINE Alu 5 303 -9 323 258 75 30 chr17 36723206 36723417 -52781136 - L1MCa LINE L1 -999 1788 1359 331 246 14 0 chr17 36723428 36723497 -52781056 - L1MCa LINE L1 -6292 315 246 1787 191 52 3 chr17 36723687 36724032 -52780521 - MLT1A1 LTR MaLR 0 365 4 1092 168 24 39 chr17 36724096 36724304 -52780249 - AluJo SINE Alu -26 286 82 25 0 0 0 chr17 36725195 36725220 -52779333 + AT_rich Low_complexity Low_complexity 1 25 0 742 199 11 52 chr17 36725341 36725532 -52779021 + pTR5 LTR ERV1 742 924 -1514 585 150 0 80 chr17 36725642 36725755 -52778798 + MER1B DNA MER1_type 217 320 -19 2115 126 45 34 chr17 36726789 36727146 -52777407 - THE1B LTR MaLR -3 361 1 1947 103 50 4 chr17 36729046 36729307 -52775246 + AluSx SINE Alu 3 275 -37 197 32 0 32 chr17 36729312 36729343 -52775210 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 572 258 89 4 chr17 36729740 36729988 -52774565 + L1ME3A LINE L1 4932 5200 -946 849 149 8 0 chr17 36729988 36730109 -52774444 + FLAM_C SINE Alu 1 122 -21 451 193 12 0 chr17 36730115 36730198 -52774355 - AluJo SINE Alu -157 155 72 826 140 81 0 chr17 36730298 36730434 -52774119 - MER1B DNA MER1_type -150 147 1 180 308 77 48 chr17 36730577 36730681 -52773872 + MIR SINE MIR 4 110 -152 2210 110 0 0 chr17 36730890 36731189 -52773364 - AluSq SINE Alu -14 299 1 372 212 44 9 chr17 36731189 36731315 -52773238 + L1ME3A LINE L1 5834 5963 -207 21 0 0 0 chr17 36731508 36731529 -52773024 + AT_rich Low_complexity Low_complexity 1 21 0 252 256 139 23 chr17 36731901 36732030 -52772523 - L1ME4a LINE L1 -15 6106 5963 180 0 0 0 chr17 36732219 36732239 -52772314 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2324 97 0 0 chr17 36732242 36732531 -52772022 - AluSx SINE Alu -23 289 1 933 257 102 35 chr17 36732817 36733249 -52771304 + HAL1 LINE L1 1752 2212 -295 1147 135 0 0 chr17 36733268 36733424 -52771129 + AluSx SINE Alu 1 156 -156 342 0 0 0 chr17 36735747 36735785 -52768768 + (TG)n Simple_repeat Simple_repeat 1 38 0 1830 172 33 7 chr17 36737133 36737254 -52767299 + AluJo SINE Alu 1 117 -195 267 103 0 0 chr17 36737254 36737293 -52767260 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1830 172 33 7 chr17 36737293 36737473 -52767080 + AluJo SINE Alu 117 310 -2 2122 137 0 0 chr17 36738162 36738454 -52766099 + AluSx SINE Alu 5 296 -16 827 159 0 181 chr17 36738546 36738817 -52765736 - L1MEc LINE L1 -6133 263 42 891 261 97 18 chr17 36738821 36739151 -52765402 + HAL1b LINE L1 445 800 -548 468 266 125 11 chr17 36739640 36740001 -52764552 + HAL1b LINE L1 921 1322 -26 1089 134 4 121 chr17 36740362 36740593 -52763960 - MER20 DNA MER1_type 0 219 16 319 214 51 10 chr17 36740800 36740898 -52763655 + HAL1 LINE L1 1550 1651 -856 799 294 102 50 chr17 36741179 36741471 -52763082 + L1MC4a LINE L1 4357 4632 -1514 1972 148 0 10 chr17 36741471 36741769 -52762784 + AluJb SINE Alu 1 295 -17 799 294 102 50 chr17 36741769 36742932 -52761621 + L1MC4a LINE L1 4632 5338 -808 225 0 0 0 chr17 36743482 36743507 -52761046 + (CA)n Simple_repeat Simple_repeat 2 26 0 21986 48 65 1 chr17 36744094 36747903 -52756650 + L1P LINE L1 1 3980 -2166 3313 138 54 58 chr17 36747903 36749202 -52755351 - pTR5 LTR ERV1 -2 2436 66 12295 39 8 0 chr17 36749202 36751366 -52753187 + L1PA4 LINE L1 3977 6153 -2 464 227 10 0 chr17 36751713 36751810 -52752743 + MER5A DNA MER1_type 9 106 -83 418 233 108 16 chr17 36752049 36752178 -52752375 - MER96 DNA MER1_type? -14 161 21 1822 312 121 25 chr17 36752182 36753019 -52751534 + HERVL LTR ERVL 1359 2115 -3539 1318 176 123 11 chr17 36753019 36753280 -52751273 + AluSx SINE Alu 1 290 -22 1822 312 121 25 chr17 36753280 36754440 -52750113 + HERVL LTR ERVL 2115 3598 -2056 1238 185 63 119 chr17 36754824 36755202 -52749351 - MER57A LTR ERV1 -4 399 43 740 268 84 23 chr17 36755421 36755682 -52748871 + LTR33 LTR ERVL 3 279 -242 385 218 38 45 chr17 36755757 36755869 -52748684 + LTR33 LTR ERVL 381 493 -28 1068 202 202 35 chr17 36755869 36756241 -52748312 - MER57B LTR ERV1 0 434 1 385 218 38 45 chr17 36756241 36756261 -52748292 + LTR33 LTR ERVL 493 512 -9 230 214 18 18 chr17 36756317 36756373 -52748180 - MER5A DNA MER1_type -14 175 120 365 237 93 34 chr17 36756430 36756548 -52748005 + MER5A DNA MER1_type 9 133 -56 2752 88 3 24 chr17 36756637 36757014 -52747539 - L1PB1 LINE L1 -1 6150 5782 276 149 0 0 chr17 36757014 36757061 -52747492 + (TA)n Simple_repeat Simple_repeat 2 48 0 241 174 0 0 chr17 36757061 36757107 -52747446 + LTR66 LTR ERVL 394 439 -171 197 208 0 19 chr17 36757109 36757162 -52747391 + (CATA)n Simple_repeat Simple_repeat 2 53 0 560 173 20 0 chr17 36757162 36757286 -52747267 - L1PB1 LINE L1 -361 5790 5660 339 111 0 0 chr17 36757412 36757466 -52747087 - MADE1 DNA Mariner 0 80 27 1916 110 51 0 chr17 36757567 36757821 -52746732 + AluSg SINE Alu 1 267 -43 1287 183 133 76 chr17 36758458 36758825 -52745728 + MLT1B LTR MaLR 3 390 0 9028 209 38 33 chr17 36758825 36760415 -52744138 + L1MB7 LINE L1 2885 4493 -1653 1914 166 0 7 chr17 36760415 36760710 -52743843 + AluJb SINE Alu 1 293 -19 9028 209 38 33 chr17 36760710 36761424 -52743129 + L1MB7 LINE L1 4493 5202 -944 1549 189 36 17 chr17 36761425 36761726 -52742827 + AluJo SINE Alu 1 307 -5 2779 151 52 23 chr17 36761755 36762272 -52742281 + L1MB7 LINE L1 5651 6182 -2 6929 184 49 7 chr17 36763055 36763565 -52740988 + L1P5 LINE L1 3881 4368 -1788 183 80 0 0 chr17 36763565 36763590 -52740963 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 6929 184 49 7 chr17 36763590 36764447 -52740106 + L1P5 LINE L1 4368 5329 -827 201 74 0 0 chr17 36764447 36764474 -52740079 + (CAA)n Simple_repeat Simple_repeat 1 27 0 6929 184 49 7 chr17 36764474 36764668 -52739885 + L1P5 LINE L1 5329 5513 -643 1665 167 25 2 chr17 36765818 36766311 -52738242 + L1M2 LINE L1 5065 5566 -725 2661 100 17 0 chr17 36766311 36766660 -52737893 + THE1A LTR MaLR 1 355 0 5302 94 13 0 chr17 36766660 36767361 -52737192 + THE1A-int LTR MaLR 1 710 -870 2102 109 23 4 chr17 36767361 36767799 -52736754 + LTR19A LTR ERV1 1 486 0 16920 85 18 9 chr17 36767799 36768097 -52736456 + LTR19A-int LTR ERV1 1 295 -5291 405 39 0 0 chr17 36768097 36768148 -52736405 + (TC)n Simple_repeat Simple_repeat 2 52 0 16920 85 18 9 chr17 36768148 36770123 -52734430 + LTR19A-int LTR ERV1 295 2368 -3218 2500 82 0 0 chr17 36770123 36770428 -52734125 + AluY SINE Alu 1 305 -6 16920 85 18 9 chr17 36770428 36770569 -52733984 + LTR19A-int LTR ERV1 2368 2506 -3080 16199 134 11 106 chr17 36770569 36773982 -52730571 + L1PA7 LINE L1 1 3089 -3057 10898 87 1 13 chr17 36773982 36775395 -52729158 + HERV30 LTR ERV1 1751 3146 -5111 7381 107 31 4 chr17 36775388 36776418 -52728135 + HERV30 LTR ERV1 7197 8254 -3 * 5686 69 31 0 chr17 36776421 36777121 -52727432 + LTR30 LTR ERV1 1 722 0 15918 102 11 1 chr17 36777121 36780094 -52724459 + L1PA7 LINE L1 3191 6180 0 804 212 6 6 chr17 36780097 36780262 -52724291 + L1 LINE L1 2209 2373 -3773 1686 203 0 0 chr17 36780265 36780555 -52723998 + AluJb SINE Alu 1 290 -22 4190 111 33 4 chr17 36780555 36781253 -52723300 - L1M1 LINE L1 -4328 3237 2520 * 8446 176 50 15 chr17 36781241 36782950 -52721603 - L1PBb LINE L1 -3940 2263 403 230 296 80 45 chr17 36784219 36784418 -52720135 - L1PA12 LINE L1 -5503 2078 1873 473 266 184 37 chr17 36784522 36784876 -52719677 - L1PA12 LINE L1 -7166 415 10 1671 148 0 67 chr17 36784894 36785191 -52719362 - AluJo SINE Alu -14 298 22 336 343 46 52 chr17 36785204 36785510 -52719043 - HAL1b LINE L1 -947 401 98 1370 114 24 63 chr17 36785514 36785768 -52718785 - L1MC1 LINE L1 -5 6328 6085 2380 142 6 6 chr17 36785779 36786145 -52718408 - L1PB1 LINE L1 -3 6148 5783 225 226 0 0 chr17 36786156 36786218 -52718335 - L1MC4 LINE L1 -1339 6703 6642 * 1311 81 14 48 chr17 36786210 36786420 -52718133 - L1P5 LINE L1 -640 5511 5309 269 241 23 0 chr17 36786422 36786509 -52718044 - L1MC4 LINE L1 -1339 6703 6615 5277 172 43 19 chr17 36786553 36788258 -52716295 - L1P5 LINE L1 -360 5791 4048 256 286 12 12 chr17 36788260 36788344 -52716209 - HERVFH21 LTR ERV1 -543 5986 5903 * 3228 109 47 51 chr17 36788312 36788792 -52715761 - HERVFH21 LTR ERV1 -2910 5210 4731 2260 111 7 0 chr17 36788792 36789098 -52715455 - AluSp SINE Alu -5 308 1 3228 109 47 51 chr17 36789098 36789169 -52715384 - HERVFH21 LTR ERV1 -3389 4731 4661 1216 152 0 0 chr17 36789169 36789373 -52715180 - MST-int LTR MaLR -1399 252 49 1004 129 32 7 chr17 36789378 36789533 -52715020 - MSTA LTR MaLR -269 159 1 3965 149 100 0 chr17 36789535 36790177 -52714376 - L1M1 LINE L1 -5396 2169 1464 345 150 0 167 chr17 36790180 36790264 -52714289 + L1 LINE L1 3125 3186 -2960 2325 78 0 0 chr17 36790264 36790582 -52713971 - AluY SINE Alu 0 318 1 345 150 0 167 chr17 36790582 36790616 -52713937 + L1 LINE L1 3186 3224 -2922 498 135 108 0 chr17 36790616 36790690 -52713863 + AluJ/FLAM SINE Alu 1 82 -230 1179 174 5 0 chr17 36790690 36790891 -52713662 + L1 LINE L1 3834 4035 -2111 2029 146 9 0 chr17 36790894 36791448 -52713105 - L1P5 LINE L1 -599 5552 4993 1603 161 12 0 chr17 36791448 36791696 -52712857 + MER51-int LTR ERV1 7566 7816 0 2029 150 61 22 chr17 36791732 36792159 -52712394 + MER51A LTR ERV1 193 634 0 3923 106 16 24 chr17 36792162 36792786 -52711767 + LOR1b-int LTR ERV1 4844 5462 -2658 1945 170 170 166 chr17 36792786 36793294 -52711259 - LTR28 LTR ERV1 0 1020 505 2082 110 3 23 chr17 36793294 36793595 -52710958 + AluSg SINE Alu 1 295 -15 1945 170 170 166 chr17 36793595 36794091 -52710462 - LTR28 LTR ERV1 -515 505 12 622 93 12 0 chr17 36794091 36794177 -52710376 + LOR1b-int LTR ERV1 5978 6064 -2056 * 666 121 0 0 chr17 36794176 36794267 -52710286 + LOR1b-int LTR ERV1 8030 8120 0 2657 145 57 14 chr17 36794267 36794709 -52709844 + LOR1b LTR ERV1 1 461 0 2924 102 14 9 chr17 36794709 36795129 -52709424 + L1MA2 LINE L1 5879 6300 -4 382 241 46 0 chr17 36795139 36795226 -52709327 - L1ME LINE L1 -383 5783 5693 381 204 29 68 chr17 36795210 36795313 -52709240 + L1P LINE L1 4000 4098 -2048 * 186 71 0 0 chr17 36795318 36795346 -52709207 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 8163 208 20 9 chr17 36795346 36795881 -52708672 - L1 LINE L1 -1749 4397 3870 2308 84 3 17 chr17 36795881 36796179 -52708374 - AluSp SINE Alu -19 294 1 8163 208 20 9 chr17 36796179 36797661 -52706892 - L1 LINE L1 -2276 3870 2357 * 31352 106 9 25 chr17 36797636 36804116 -52700437 - L1PA7 LINE L1 -2 6467 1 6771 141 71 15 chr17 36804122 36805452 -52699101 - L1PBa LINE L1 -3758 3104 1698 2562 205 64 7 chr17 36805472 36806047 -52698506 + L1MC4 LINE L1 7296 7903 -139 1129 198 69 16 chr17 36806155 36806402 -52698151 - AluJo SINE Alu -11 301 42 741 168 92 0 chr17 36807164 36807283 -52697270 + FLAM_A SINE Alu 1 130 -3 1395 178 147 8 chr17 36807550 36807809 -52696744 + AluJb SINE Alu 1 295 -7 5610 197 39 25 chr17 36807984 36808486 -52696067 - L1MA9 LINE L1 -4 6308 5815 288 0 0 0 chr17 36808486 36808518 -52696035 + (TG)n Simple_repeat Simple_repeat 2 33 0 5610 197 39 25 chr17 36808518 36808694 -52695859 - L1MA9 LINE L1 -497 5815 5643 1532 211 0 13 chr17 36808694 36808997 -52695556 - AluJo SINE Alu -12 300 2 5610 197 39 25 chr17 36808997 36810224 -52694329 - L1MA9 LINE L1 -669 5643 4435 2138 140 3 0 chr17 36810224 36810531 -52694022 - AluSq SINE Alu -5 308 1 5610 197 39 25 chr17 36810531 36810662 -52693891 - L1MA9 LINE L1 -1877 4435 4307 7109 81 28 0 chr17 36810662 36811535 -52693018 + MER11D LTR ERVK 1 897 0 5610 197 39 25 chr17 36811535 36811666 -52692887 - L1MA9 LINE L1 -2005 4307 4106 294 67 0 0 chr17 36811716 36811761 -52692792 - Alu SINE Alu 0 300 256 230 263 25 12 chr17 36812626 36812706 -52691847 - MLT1I-int LTR MaLR -1654 81 1 1112 291 18 24 chr17 36812706 36813065 -52691488 - MLT1I LTR MaLR 0 409 74 435 312 116 0 chr17 36813103 36813292 -52691261 - MLT1J LTR MaLR -199 312 102 463 278 0 0 chr17 36813886 36814012 -52690541 + L1MA10 LINE L1 6202 6327 -7 1038 164 0 0 chr17 36814796 36814961 -52689592 + AluJb SINE Alu 131 295 -17 295 234 0 53 chr17 36815087 36815181 -52689372 + CT-rich Low_complexity Low_complexity 5 93 0 763 188 21 14 chr17 36815576 36815720 -52688833 + AluJo SINE Alu 5 149 -163 1514 162 54 11 chr17 36815722 36816000 -52688553 + AluJo SINE Alu 18 307 -5 403 234 32 0 chr17 36816018 36816112 -52688441 + LTR43 LTR ERV1 1 97 -505 2690 126 29 79 chr17 36816137 36816655 -52687898 + L1MA9 LINE L1 5625 6116 -196 2074 141 0 10 chr17 36816732 36817036 -52687517 - AluSx SINE Alu -7 305 5 491 165 25 25 chr17 36817069 36817190 -52687363 + L1MC3 LINE L1 6919 7039 -746 285 207 0 17 chr17 36817233 36817291 -52687262 + MLT1F1 LTR MaLR 45 101 -466 2695 176 38 55 chr17 36817295 36817675 -52686878 + L1MC3 LINE L1 7194 7579 -206 2629 51 0 6 chr17 36817675 36817986 -52686567 + AluY SINE Alu 1 309 -2 2695 176 38 55 chr17 36817986 36818105 -52686448 + L1MC3 LINE L1 7579 7698 -87 1458 203 0 14 chr17 36818105 36818381 -52686172 + AluJo SINE Alu 9 280 -32 522 0 0 0 chr17 36818381 36818439 -52686114 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 2695 176 38 55 chr17 36818439 36818538 -52686015 + L1MC3 LINE L1 7696 7784 -1 987 150 0 14 chr17 36818672 36818819 -52685734 + FRAM SINE Alu 12 156 -20 26 50 0 0 chr17 36819052 36819092 -52685461 + AT_rich Low_complexity Low_complexity 1 40 0 1191 182 39 113 chr17 36819646 36820036 -52684517 - MLT1A2 LTR MaLR -13 361 1 282 130 93 0 chr17 36820214 36820268 -52684285 + L1MC5 LINE L1 6683 6741 -1220 887 273 104 28 chr17 36820544 36820899 -52683654 + L1ME LINE L1 27 408 -5662 409 245 38 19 chr17 36822467 36822573 -52681980 - HsTC2 DNA Tc2 -1787 111 4 354 251 62 78 chr17 36822649 36822761 -52681792 - MIR3 SINE MIR -42 220 110 1117 171 0 0 chr17 36822761 36822925 -52681628 + FRAM SINE Alu 1 164 -2 354 251 62 78 chr17 36822925 36823034 -52681519 - MIR3 SINE MIR -152 110 1 445 285 78 22 chr17 36824190 36824509 -52680044 - L1M4 LINE L1 -867 5279 4943 316 83 48 12 chr17 36824684 36824768 -52679785 + (TA)n Simple_repeat Simple_repeat 2 88 0 216 129 0 65 chr17 36824770 36824832 -52679721 + (TAAAAA)n Simple_repeat Simple_repeat 2 59 0 261 131 56 0 chr17 36824832 36824939 -52679614 + (TA)n Simple_repeat Simple_repeat 1 113 0 251 286 115 47 chr17 36825152 36825733 -52678820 - L1M4 LINE L1 -1718 4428 3808 1120 182 0 0 chr17 36825860 36826019 -52678534 + FRAM SINE Alu 1 159 -7 225 348 0 0 chr17 36826444 36826513 -52678040 + MIR SINE MIR 54 122 -86 232 363 23 29 chr17 36826817 36826988 -52677565 - MER5A DNA MER1_type -4 185 16 872 167 0 0 chr17 36827815 36827941 -52676612 + FRAM SINE Alu 4 129 -47 848 227 12 0 chr17 36828452 36828615 -52675938 - FRAM SINE Alu -11 165 1 2072 110 39 0 chr17 36828742 36829023 -52675530 - AluSx SINE Alu -20 292 1 1908 217 33 7 chr17 36829054 36829473 -52675080 + MER63B DNA MER1_type 7 436 0 277 336 94 66 chr17 36830849 36831135 -52673418 - L2 LINE L2 0 3272 2979 330 194 38 198 chr17 36831268 36831556 -52672997 - L2 LINE L2 -1215 2099 1858 231 293 98 30 chr17 36831609 36831742 -52672811 + MIR SINE MIR 51 192 -70 472 324 138 39 chr17 36831824 36832259 -52672294 - L2 LINE L2 -1471 1843 1366 1790 112 31 42 chr17 36832298 36832584 -52671969 - AluJo SINE Alu -29 283 1 34 24 0 0 chr17 36833428 36833469 -52671084 + AT_rich Low_complexity Low_complexity 1 41 0 1039 116 14 0 chr17 36833619 36833819 -52670734 + AluSg/x SINE Alu 139 340 0 1821 166 3 7 chr17 36834446 36834736 -52669817 + AluJb SINE Alu 1 289 -23 234 143 0 0 chr17 36834739 36834788 -52669765 + (TA)n Simple_repeat Simple_repeat 2 50 0 374 308 60 41 chr17 36834788 36835106 -52669447 + L1ME LINE L1 87 410 -5660 847 118 25 0 chr17 36835148 36835267 -52669286 + AluJb SINE Alu 1 122 -190 728 51 0 10 chr17 36835267 36835365 -52669188 + (GGAA)n Simple_repeat Simple_repeat 3 99 0 349 321 54 40 chr17 36835607 36835831 -52668722 + L1ME LINE L1 533 759 -5311 747 261 64 44 chr17 36836021 36836474 -52668079 + L1ME LINE L1 4835 5296 -784 344 265 144 50 chr17 36836572 36836753 -52667800 + L1ME LINE L1 5401 5595 -460 351 306 91 29 chr17 36839190 36839465 -52665088 - L1M4 LINE L1 -2742 3404 3113 7349 102 22 11 chr17 36839649 36840644 -52663909 + LTR13 LTR ERVK 2 1007 0 2148 114 3 19 chr17 36840679 36840995 -52663558 - AluSq SINE Alu -2 311 1 797 174 101 7 chr17 36841025 36841174 -52663379 + MLT1A1 LTR MaLR 1 163 -202 3980 165 77 58 chr17 36841175 36842261 -52662292 + MER52C LTR ERV1 23 1278 0 990 178 41 25 chr17 36842265 36842462 -52662091 + MLT1A1 LTR MaLR 166 365 0 1428 215 53 6 chr17 36843662 36844020 -52660533 - L1 LINE L1 -2593 3553 3179 4066 182 43 12 chr17 36844028 36845058 -52659495 - L1P4 LINE L1 -679 5487 4427 180 0 0 0 chr17 36845422 36845442 -52659111 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2351 62 0 3 chr17 36846759 36847047 -52657506 + AluY SINE Alu 4 290 -21 2377 76 0 0 chr17 36847617 36847919 -52656634 + AluSx SINE Alu 1 302 -10 1335 191 11 15 chr17 36848108 36848381 -52656172 + AluJb SINE Alu 9 280 -32 355 277 66 24 chr17 36848406 36848572 -52655981 + L1M4 LINE L1 3751 3923 -2223 330 308 10 0 chr17 36848572 36848676 -52655877 - MLT1I LTR MaLR -232 177 73 21 0 0 0 chr17 36850224 36850245 -52654308 + AT_rich Low_complexity Low_complexity 1 21 0 223 281 18 0 chr17 36851713 36851770 -52652783 + L2 LINE L2 3252 3309 -4 218 140 0 20 chr17 36852709 36852759 -52651794 + (TTTTTG)n Simple_repeat Simple_repeat 5 53 0 346 286 43 49 chr17 36853206 36853391 -52651162 + L1M4 LINE L1 3968 4151 -1995 230 254 75 0 chr17 36853458 36853525 -52651028 + L1M4 LINE L1 4787 4858 -1288 460 146 104 116 chr17 36853645 36853702 -52650851 - MER96B DNA MER1_type? -238 179 123 1435 167 29 7 chr17 36853702 36854029 -52650524 - AluJb SINE Alu 0 333 1 460 146 104 116 chr17 36854029 36854134 -52650419 - MER96B DNA MER1_type? -294 123 18 409 254 16 16 chr17 36854147 36854273 -52650280 + L1MA10 LINE L1 6202 6327 -7 423 0 0 0 chr17 36854730 36854777 -52649776 + (CA)n Simple_repeat Simple_repeat 2 48 0 722 211 20 7 chr17 36855033 36855185 -52649368 + FRAM SINE Alu 2 155 -11 329 246 18 53 chr17 36855300 36855414 -52649139 + C-rich Low_complexity Low_complexity 1 110 0 775 92 100 8 chr17 36855815 36855935 -52648618 + AluJ SINE Alu 2 132 -180 2158 108 0 0 chr17 36855938 36856245 -52648308 + AluSq SINE Alu 1 307 -6 30 0 0 0 chr17 36856245 36856275 -52648278 + AT_rich Low_complexity Low_complexity 1 30 0 335 195 23 58 chr17 36856276 36856363 -52648190 + AluJ SINE Alu 119 202 -100 891 107 8 0 chr17 36856732 36856854 -52647699 + FLAM_C SINE Alu 1 123 -10 22 35 0 0 chr17 36856896 36856925 -52647628 + GC_rich Low_complexity Low_complexity 1 29 0 442 274 64 25 chr17 36858324 36858519 -52646034 - L1ME LINE L1 -461 5660 5477 1906 186 50 48 chr17 36859148 36859277 -52645276 + LTR2B LTR ERV1 32 159 -331 2177 108 0 0 chr17 36859277 36859572 -52644981 + AluY SINE Alu 1 295 -16 1906 186 50 48 chr17 36859572 36859900 -52644653 + LTR2B LTR ERV1 159 490 0 11733 111 52 16 chr17 36859900 36861752 -52642801 + Harlequin LTR ERV1 1 1920 -4976 3623 63 6 13 chr17 36861853 36862327 -52642226 + HERVL-A1 LTR ERVL 5184 5654 0 1732 86 40 7 chr17 36862327 36862674 -52641879 + MLT2A1 LTR ERVL 1 400 -44 24 32 0 0 chr17 36862689 36862720 -52641833 + AT_rich Low_complexity Low_complexity 1 31 0 10306 184 8 9 chr17 36862771 36864770 -52639783 - L1P LINE L1 -3170 2976 981 192 40 0 0 chr17 36866493 36866518 -52638035 + (CCCCCG)n Simple_repeat Simple_repeat 3 27 0 1167 229 34 12 chr17 36866734 36867057 -52637496 - L1MDa LINE L1 -3162 3378 3049 1011 213 29 0 chr17 36867093 36867300 -52637253 - AluJo SINE Alu -22 290 78 4505 215 62 20 chr17 36867304 36867585 -52636968 - L1MDa LINE L1 -3547 2993 2725 1961 140 3 10 chr17 36867585 36867893 -52636660 - AluSx SINE Alu -6 306 1 4505 215 62 20 chr17 36867893 36868923 -52635630 - L1MDa LINE L1 -3815 2725 1623 256 173 0 19 chr17 36869130 36869182 -52635371 + MER107 DNA MER1_type 68 118 -79 2279 160 46 0 chr17 36869200 36869593 -52634960 + LTR57 LTR ERVL 1 411 0 2366 145 56 12 chr17 36869637 36870051 -52634502 - MSTB1 LTR MaLR 0 432 1 3082 92 5 2 chr17 36870096 36870521 -52634032 - L1PA14 LINE L1 -1 6160 5735 7294 196 67 48 chr17 36870551 36870692 -52633861 + HERVL74 LTR ERVL 1031 1168 -4517 2067 116 0 25 chr17 36870692 36871011 -52633542 - AluSx SINE Alu -1 311 1 7294 196 67 48 chr17 36871011 36871815 -52632738 + HERVL74 LTR ERVL 1168 1955 -3730 2554 140 27 13 chr17 36871815 36872264 -52632289 - L1MC1 LINE L1 0 6333 5879 7294 196 67 48 chr17 36872264 36873500 -52631053 + HERVL74 LTR ERVL 1955 3340 -2345 667 217 53 13 chr17 36873489 36873641 -52630912 + HERVL74 LTR ERVL 3486 3643 -2042 * 198 0 0 0 chr17 36873643 36873665 -52630888 + (CAAG)n Simple_repeat Simple_repeat 2 23 0 748 171 11 102 chr17 36873665 36873729 -52630824 + HERVL74 LTR ERVL 3914 3982 -1703 1693 195 0 3 chr17 36873729 36874042 -52630511 - AluJb SINE Alu 0 312 1 748 171 11 102 chr17 36874042 36874153 -52630400 + HERVL74 LTR ERVL 3982 4073 -1612 368 309 10 0 chr17 36874144 36874241 -52630312 + HERVL74 LTR ERVL 4589 4686 -999 * 1918 224 72 46 chr17 36874249 36874569 -52629984 + HERVL74 LTR ERVL 4644 4987 -698 1660 172 14 3 chr17 36874569 36874865 -52629688 + AluJo SINE Alu 1 299 -13 1918 224 72 46 chr17 36874865 36875110 -52629443 + HERVL74 LTR ERVL 4987 5224 -461 396 45 45 0 chr17 36875121 36875188 -52629365 + (TA)n Simple_repeat Simple_repeat 2 71 0 714 274 17 26 chr17 36875191 36875421 -52629132 + HERVL74 LTR ERVL 5376 5603 -82 348 151 0 0 chr17 36875475 36875528 -52629025 + MER74B LTR ERVL 1 53 -569 1140 264 30 35 chr17 36875587 36875955 -52628598 + MER74B LTR ERVL 251 616 -6 1231 141 5 15 chr17 36876332 36876538 -52628015 + AluSg/x SINE Alu 75 278 -32 13312 95 19 68 chr17 36876538 36879045 -52625508 + L1PA10 LINE L1 3359 5696 -472 2260 95 0 0 chr17 36879045 36879340 -52625213 + AluSq SINE Alu 6 300 -13 13312 95 19 68 chr17 36879340 36879769 -52624784 + L1PA10 LINE L1 5696 6144 -24 566 182 0 0 chr17 36879869 36879957 -52624596 - AluS SINE Alu -224 89 2 435 171 0 0 chr17 36879966 36880048 -52624505 - L1MB8 LINE L1 -211 5967 5886 2144 212 29 46 chr17 36880048 36880301 -52624252 + L1M4 LINE L1 2533 2789 -3357 2096 116 10 3 chr17 36880301 36880603 -52623950 + AluSx SINE Alu 3 306 -6 2265 88 10 0 chr17 36880603 36880898 -52623655 + AluSx SINE Alu 1 299 -13 2144 212 29 46 chr17 36880898 36881257 -52623296 + L1M4 LINE L1 2787 3136 -3010 406 276 69 35 chr17 36881261 36881377 -52623176 + MIR3 SINE MIR 82 201 -7 208 337 0 10 chr17 36881378 36881479 -52623074 + (TG)n Simple_repeat Simple_repeat 2 101 0 213 254 18 0 chr17 36882440 36882455 -52622098 + GA-rich Low_complexity Low_complexity 2 15 -42 1769 149 7 16 chr17 36882455 36882764 -52621789 + AluJo SINE Alu 1 306 -6 213 254 18 0 chr17 36882764 36882803 -52621750 + GA-rich Low_complexity Low_complexity 15 57 0 1827 153 6 13 chr17 36882875 36883156 -52621397 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr17 36883156 36883183 -52621370 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1827 153 6 13 chr17 36883183 36883215 -52621338 + AluSx SINE Alu 281 312 0 400 288 40 62 chr17 36883677 36883870 -52620683 + MIR SINE MIR 39 226 -36 777 165 47 0 chr17 36883950 36884077 -52620476 - FLAM_C SINE Alu 0 133 1 2288 88 0 7 chr17 36884306 36884613 -52619940 + AluSq SINE Alu 1 305 -8 417 179 71 62 chr17 36884751 36884863 -52619690 - MIR SINE MIR -92 170 58 2204 78 0 0 chr17 36884917 36885200 -52619353 + AluY SINE Alu 1 283 -28 551 222 104 7 chr17 36885209 36885344 -52619209 - MIR3 SINE MIR -51 157 10 183 276 122 73 chr17 36885910 36886033 -52618520 - MIR3 SINE MIR -78 130 2 2017 103 0 3 chr17 36886367 36886649 -52617904 - AluSq SINE Alu -16 297 17 476 268 56 86 chr17 36887376 36887538 -52617015 - MIR SINE MIR -14 248 92 2369 75 0 0 chr17 36887538 36887844 -52616709 + AluY SINE Alu 1 306 -5 476 268 56 86 chr17 36887844 36887879 -52616674 - MIR SINE MIR -170 92 57 2322 84 0 13 chr17 36888309 36888620 -52615933 + AluY SINE Alu 1 307 -4 882 160 17 40 chr17 36888632 36888869 -52615684 + FAM SINE Alu 1 101 0 384 251 310 11 chr17 36889183 36889454 -52615099 + L2 LINE L2 2157 2508 -806 596 319 91 21 chr17 36889503 36889788 -52614765 + L2 LINE L2 2828 3132 -181 2148 120 0 0 chr17 36889800 36890109 -52614444 - AluSx SINE Alu -1 311 3 2088 99 7 3 chr17 36890296 36890614 -52613939 + AluSq SINE Alu 1 319 0 654 238 149 47 chr17 36890798 36891012 -52613541 - MIR SINE MIR -1 261 26 426 270 92 13 chr17 36891061 36891213 -52613340 - MIR SINE MIR -94 168 5 1615 128 8 0 chr17 36892183 36892432 -52612121 - L1MB7 LINE L1 -9 6175 5925 1828 108 74 0 chr17 36892628 36892897 -52611656 - AluSg SINE Alu -21 289 1 322 239 174 9 chr17 36893414 36893523 -52611030 + MIR3 SINE MIR 10 136 -72 1929 128 7 13 chr17 36893761 36894059 -52610494 - AluSx SINE Alu -16 296 1 486 90 0 0 chr17 36894095 36894162 -52610391 - MER53 DNA DNA -2 187 121 2172 99 0 13 chr17 36894188 36894490 -52610063 + AluSx SINE Alu 1 298 -14 2305 70 0 3 chr17 36894492 36894790 -52609763 + AluY SINE Alu 3 299 -12 431 294 149 5 chr17 36894923 36895117 -52609436 - MIR SINE MIR -11 251 30 220 271 73 62 chr17 36897561 36897657 -52606896 + MIR SINE MIR 71 167 -95 420 104 0 0 chr17 36898907 36898974 -52605579 + (TA)n Simple_repeat Simple_repeat 2 68 0 30 0 0 0 chr17 36898989 36899019 -52605534 + AT_rich Low_complexity Low_complexity 1 30 0 302 193 110 18 chr17 36899019 36899128 -52605425 - L1ME3A LINE L1 -6 6164 6046 2469 69 3 0 chr17 36899194 36899498 -52605055 - AluY SINE Alu -6 305 1 584 265 28 62 chr17 36899502 36899554 -52604999 - MIR SINE MIR -10 252 200 1788 151 0 10 chr17 36899554 36899881 -52604672 - AluJo SINE Alu 0 312 1 584 265 28 62 chr17 36899881 36899895 -52604658 - MIR SINE MIR -62 200 187 288 77 0 0 chr17 36899895 36899934 -52604619 + (CA)n Simple_repeat Simple_repeat 2 40 0 584 265 28 62 chr17 36899934 36900077 -52604476 - MIR SINE MIR -75 187 49 363 242 77 65 chr17 36901152 36901310 -52603243 + MIR SINE MIR 21 179 -63 505 227 258 0 chr17 36901362 36901525 -52603028 - MIR SINE MIR -2 260 56 2105 128 7 0 chr17 36901821 36902119 -52602434 - AluSx SINE Alu -12 300 1 235 220 0 0 chr17 36902912 36902962 -52601591 - MIR SINE MIR -72 136 87 183 80 0 0 chr17 36903357 36903382 -52601171 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 341 310 71 0 chr17 36903387 36903500 -52601053 - L2 LINE L2 -22 3291 3171 228 226 0 0 chr17 36906542 36906595 -52597958 + CT-rich Low_complexity Low_complexity 2 54 0 2057 117 0 0 chr17 36906710 36907034 -52597519 - AluSx SINE Alu 0 324 1 1460 194 7 36 chr17 36907065 36907369 -52597184 + AluJb SINE Alu 3 297 -15 750 144 0 50 chr17 36907369 36907497 -52597056 - FLAM_C SINE Alu -178 124 2 2406 54 10 0 chr17 36907509 36907805 -52596748 - AluY SINE Alu -12 299 1 257 325 12 0 chr17 36908071 36908154 -52596399 - MER91A DNA MER1_type -110 86 3 2305 100 3 0 chr17 36908359 36908670 -52595883 + AluSp SINE Alu 1 312 -1 248 328 255 12 chr17 36908800 36909047 -52595506 - L2 LINE L2 -451 2863 2557 968 181 12 0 chr17 36909070 36909236 -52595317 + AluJb SINE Alu 136 303 -9 2199 106 0 22 chr17 36909238 36909549 -52595004 + AluSx SINE Alu 1 304 -8 373 269 43 57 chr17 36909945 36910086 -52594467 + MIR SINE MIR 21 159 -103 1741 247 108 11 chr17 36910656 36910952 -52593601 - LTR40a LTR ERVL 0 519 158 2003 108 7 0 chr17 36910952 36911229 -52593324 - AluY SINE Alu -32 279 1 1741 247 108 11 chr17 36911229 36911405 -52593148 - LTR40a LTR ERVL -361 158 1 2017 136 0 0 chr17 36911915 36912235 -52592318 - AluSx SINE Alu 0 324 5 992 192 0 6 chr17 36912698 36912865 -52591688 + FAM SINE Alu 1 166 -9 482 274 70 5 chr17 36913092 36913387 -52591166 - MLT1L LTR MaLR -112 399 131 310 91 0 0 chr17 36913456 36913541 -52591012 - AluSq SINE Alu 0 324 240 1361 116 16 0 chr17 36913544 36913733 -52590820 - AluSq SINE Alu -121 192 1 2225 110 10 0 chr17 36913881 36914190 -52590363 + AluSx SINE Alu 1 312 0 338 266 83 53 chr17 36914291 36914460 -52590093 + MLT1J LTR MaLR 336 509 -2 910 162 5 81 chr17 36914679 36914749 -52589804 + MER20 DNA MER1_type 26 100 -119 2205 110 3 3 chr17 36914749 36915057 -52589496 + AluSx SINE Alu 1 308 -4 910 162 5 81 chr17 36915057 36915196 -52589357 + MER20 DNA MER1_type 100 219 0 524 262 76 6 chr17 36915205 36915377 -52589176 + L2 LINE L2 2509 2692 -622 645 85 0 0 chr17 36915396 36915478 -52589075 - AluY SINE Alu -228 82 1 471 212 0 44 chr17 36915482 36915619 -52588934 + L2 LINE L2 2725 2855 -459 854 199 93 42 chr17 36915646 36915862 -52588691 - AluJo SINE Alu 0 312 86 941 259 81 19 chr17 36915862 36916043 -52588510 + L2 LINE L2 2950 3118 -195 2012 101 29 0 chr17 36916043 36916365 -52588188 - AluSq SINE Alu 0 330 1 941 259 81 19 chr17 36916365 36916502 -52588051 + L2 LINE L2 3118 3289 -24 1459 121 128 24 chr17 36916505 36916754 -52587799 - AluJb SINE Alu -17 295 21 465 220 53 8 chr17 36916976 36917108 -52587445 - MIR SINE MIR -44 218 81 322 299 83 123 chr17 36918397 36918518 -52586035 - L2 LINE L2 -4 3268 3144 1914 112 94 3 chr17 36918518 36918804 -52585749 + AluSx SINE Alu 1 312 0 322 299 83 123 chr17 36918804 36918966 -52585587 - L2 LINE L2 -128 3144 2977 2082 114 3 3 chr17 36918966 36919263 -52585290 - AluSx SINE Alu -15 297 1 322 299 83 123 chr17 36919263 36919459 -52585094 - L2 LINE L2 -295 2977 2807 652 273 120 5 chr17 36919649 36919865 -52584688 - MIR SINE MIR 0 262 22 186 347 56 0 chr17 36920668 36920740 -52583813 + MIR SINE MIR 48 123 -85 888 283 9 22 chr17 36920831 36921061 -52583492 + MIR SINE MIR 7 233 -29 184 339 18 0 chr17 36922263 36922319 -52582234 - MIR SINE MIR -62 146 90 374 292 30 48 chr17 36923778 36923946 -52580607 - MIR3 SINE MIR -36 172 8 211 182 0 0 chr17 36925660 36925693 -52578860 + polypurine Low_complexity Low_complexity 2 34 0 1490 167 104 19 chr17 36926147 36926314 -52578239 - AluJb SINE Alu -6 296 96 180 0 0 0 chr17 36926314 36926334 -52578219 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1490 167 104 19 chr17 36926334 36926436 -52578117 - AluJb SINE Alu -206 96 4 215 219 172 0 chr17 36927562 36927626 -52576927 - MIR SINE MIR -86 122 48 492 280 147 7 chr17 36929717 36929933 -52574620 - MIR SINE MIR -32 230 2 208 262 16 33 chr17 36930539 36930600 -52573953 - L2 LINE L2 -5 3267 3208 * 255 329 39 78 chr17 36930596 36930879 -52573674 + L2 LINE L2 2980 3251 -21 288 344 55 27 chr17 36931398 36931581 -52572972 + L3b LINE CR1 1274 1461 -122 1449 244 35 73 chr17 36932388 36932730 -52571823 + L1MC4a LINE L1 5276 5081 -1065 2020 134 7 3 chr17 36932730 36933029 -52571524 - AluJb SINE Alu -12 300 1 1449 244 35 73 chr17 36933029 36933342 -52571211 + L1MC4a LINE L1 5080 5403 -743 813 179 8 0 chr17 36933343 36933477 -52571076 + AluJo SINE Alu 2 136 -176 2291 89 3 13 chr17 36933595 36933909 -52570644 + AluSx SINE Alu 1 311 -1 388 380 33 40 chr17 36934764 36935064 -52569489 + L2 LINE L2 2970 3267 -5 224 371 0 0 chr17 36935640 36935729 -52568824 + L2 LINE L2 2890 2978 -294 251 273 83 25 chr17 36936029 36936150 -52568403 - MER20B DNA MER1_type -620 163 36 246 279 250 0 chr17 36936194 36936330 -52568223 - MIR SINE MIR -9 253 84 1788 109 36 0 chr17 36936389 36936636 -52567917 - AluSq SINE Alu -57 256 1 257 226 107 12 chr17 36936668 36936752 -52567801 + L2 LINE L2 3169 3260 -12 190 333 42 42 chr17 36936762 36936882 -52567671 + MIR SINE MIR 46 165 -97 343 296 50 11 chr17 36937191 36937369 -52567184 + MIR SINE MIR 6 262 0 305 239 5 69 chr17 36938576 36938764 -52565789 + C-rich Low_complexity Low_complexity 5 180 0 24 67 0 0 chr17 36938825 36938870 -52565683 + GC_rich Low_complexity Low_complexity 1 45 0 339 277 84 39 chr17 36939548 36939703 -52564850 - MIR SINE MIR -4 258 97 2232 100 0 7 chr17 36940155 36940465 -52564088 - AluSc SINE Alu -1 308 1 566 279 95 18 chr17 36940723 36940945 -52563608 + MIR SINE MIR 8 246 -16 1260 164 60 4 chr17 36941347 36941579 -52562974 + AluJb SINE Alu 6 250 -62 529 171 171 51 chr17 36943089 36943247 -52561306 - MER5B DNA MER1_type 0 178 2 275 335 146 0 chr17 36945901 36946059 -52558494 + MIR3 SINE MIR 27 207 -1 2161 115 0 10 chr17 36948395 36948690 -52555863 - AluSx SINE Alu -20 292 1 917 118 7 29 chr17 36949927 36950063 -52554490 + FLAM_C SINE Alu 1 133 0 264 30 0 0 chr17 36950074 36950107 -52554446 + (TA)n Simple_repeat Simple_repeat 2 34 0 804 180 0 0 chr17 36950811 36950933 -52553620 - FLAM_C SINE Alu -19 124 3 1575 234 82 57 chr17 36951006 36951605 -52552948 + L1MD2 LINE L1 5743 6356 -3 259 377 9 18 chr17 36951675 36951789 -52552764 + MIR SINE MIR 35 147 -61 180 111 0 0 chr17 36951854 36951881 -52552672 + (A)n Simple_repeat Simple_repeat 1 27 0 809 156 0 25 chr17 36951951 36952073 -52552480 - FLAM_A SINE Alu -14 128 10 414 0 0 0 chr17 36952290 36952336 -52552217 + (CA)n Simple_repeat Simple_repeat 1 46 0 189 394 95 7 chr17 36954477 36954614 -52549939 + L2 LINE L2 3096 3244 -28 203 147 0 0 chr17 36955327 36955361 -52549192 + (TC)n Simple_repeat Simple_repeat 2 35 0 211 225 0 0 chr17 36955901 36955941 -52548612 + CT-rich Low_complexity Low_complexity 1 40 0 850 177 14 7 chr17 36955941 36956088 -52548465 - AluJ SINE Alu -32 280 133 507 230 93 14 chr17 36957825 36957964 -52546589 + MER103 DNA DNA 1 150 -16 2526 71 0 3 chr17 36957993 36958302 -52546251 - AluY SINE Alu -3 308 1 2268 67 0 11 chr17 36958878 36959161 -52545392 + AluY SINE Alu 1 280 -31 864 163 23 0 chr17 36959731 36959860 -52544693 - AluJ SINE Alu -170 132 1 232 255 96 53 chr17 36960671 36960765 -52543788 + MIR SINE MIR 99 196 -66 314 343 31 1 chr17 36960950 36961091 -52543462 - MIR SINE MIR -70 138 30 350 345 27 0 chr17 36961793 36961903 -52542650 - MIR SINE MIR -98 164 52 23 0 0 0 chr17 36961966 36961989 -52542564 + AT_rich Low_complexity Low_complexity 1 23 0 2092 120 7 0 chr17 36962900 36963191 -52541362 + AluSx SINE Alu 5 297 -15 2155 83 7 4 chr17 36963198 36963514 -52541039 + AluSc SINE Alu 1 317 0 2172 89 13 40 chr17 36963697 36964000 -52540553 + AluSq SINE Alu 1 295 -18 418 245 50 29 chr17 36964117 36964256 -52540297 + MER5B DNA MER1_type 2 143 -35 429 235 30 3 chr17 36964602 36964769 -52539784 + MIR SINE MIR 11 232 -30 2020 123 0 63 chr17 36964807 36965125 -52539428 + AluSx SINE Alu 1 298 -14 214 357 34 60 chr17 36965486 36965597 -52538956 + L2 LINE L2 2831 2943 -329 2464 80 0 0 chr17 36965597 36965898 -52538655 - AluSg SINE Alu -9 301 1 214 357 34 60 chr17 36965898 36966021 -52538532 + L2 LINE L2 2943 3059 -213 401 232 26 103 chr17 36966685 36966810 -52537743 + L2 LINE L2 2232 2338 -976 5432 90 4 23 chr17 36966810 36967366 -52537187 - L1PA13 LINE L1 -11 6152 5612 2510 41 24 0 chr17 36967366 36967658 -52536895 - AluY SINE Alu -12 299 1 5432 90 4 23 chr17 36967658 36967837 -52536716 - L1PA13 LINE L1 -551 5612 5431 401 232 26 103 chr17 36967837 36967905 -52536648 + L2 LINE L2 2338 2410 -904 1232 249 67 72 chr17 36967925 36968667 -52535886 + L2 LINE L2 2587 3308 -5 1407 160 13 75 chr17 36968727 36969033 -52535520 + AluJo SINE Alu 1 287 -25 615 201 94 7 chr17 36969387 36969536 -52535017 - MER112 DNA MER1_type -96 164 3 1599 153 3 103 chr17 36970524 36970865 -52533688 - AluJo SINE Alu -3 309 3 1514 171 17 35 chr17 36972035 36972322 -52532231 + AluJb SINE Alu 1 282 -30 201 39 0 0 chr17 36972325 36972351 -52532202 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2194 92 11 0 chr17 36972685 36972967 -52531586 - AluSx SINE Alu -26 286 2 576 245 34 62 chr17 36973693 36973901 -52530652 - L2 LINE L2 0 3313 3112 1734 111 96 11 chr17 36973958 36974238 -52530315 + AluSx SINE Alu 1 304 -8 494 130 90 0 chr17 36974238 36974353 -52530200 - L1MA4 LINE L1 -235 6065 5939 466 308 75 54 chr17 36974353 36974604 -52529949 - L2 LINE L2 -292 3021 2771 2123 127 0 22 chr17 36975739 36976055 -52528498 - AluSx SINE Alu -3 309 1 1685 165 0 54 chr17 36976088 36976404 -52528149 + AluJo SINE Alu 1 299 -13 1898 129 0 21 chr17 36977332 36977611 -52526942 + AluSq SINE Alu 6 278 -35 251 298 107 60 chr17 36977688 36977856 -52526697 + L3 LINE CR1 1391 1566 -11 287 296 70 58 chr17 36979767 36979939 -52524614 + HAL1 LINE L1 1 174 -2333 673 232 167 66 chr17 36979949 36980345 -52524208 + HAL1 LINE L1 256 691 -1816 * 1152 235 47 10 chr17 36980343 36980772 -52523781 + L1M4b LINE L1 1608 2191 -4947 * 1221 165 102 78 chr17 36980764 36980796 -52523757 + L1MC5 LINE L1 7476 7506 -489 856 196 130 5 chr17 36980796 36980980 -52523573 + MER3 DNA MER1_type 3 209 0 1221 165 102 78 chr17 36980980 36981186 -52523367 + L1MC5 LINE L1 7506 7706 -289 1988 105 61 0 chr17 36981186 36981463 -52523090 + AluSx SINE Alu 1 294 -18 1221 165 102 78 chr17 36981463 36981661 -52522892 + L1MC5 LINE L1 7706 7984 -11 1906 156 0 23 chr17 36981662 36981964 -52522589 - AluSx SINE Alu -14 298 4 1701 229 255 54 chr17 36981983 36982798 -52521755 + HAL1 LINE L1 1140 1790 -717 1819 164 3 20 chr17 36982798 36983096 -52521457 + AluJo SINE Alu 1 293 -19 1701 229 255 54 chr17 36983096 36983229 -52521324 + HAL1 LINE L1 1790 1895 -612 1787 157 23 26 chr17 36983229 36983534 -52521019 + AluJo SINE Alu 1 304 -8 1701 229 255 54 chr17 36983534 36983651 -52520902 + HAL1 LINE L1 1895 1987 -520 2454 54 0 41 chr17 36983651 36983966 -52520587 - AluY SINE Alu -9 302 1 1701 229 255 54 chr17 36983966 36984030 -52520523 + HAL1 LINE L1 1987 2499 -8 2228 107 3 3 chr17 36984586 36984886 -52519667 + AluSq SINE Alu 1 300 -13 945 283 85 48 chr17 36986318 36986897 -52517656 - L1MEd LINE L1 -5269 850 251 2122 117 0 0 chr17 36987471 36987778 -52516775 + AluSx SINE Alu 1 307 0 2573 74 0 3 chr17 36988005 36988314 -52516239 + AluSq SINE Alu 1 308 -5 1573 198 0 18 chr17 36988374 36988657 -52515896 - AluSx SINE Alu -15 297 20 1281 206 29 39 chr17 36988946 36989257 -52515296 + AluJo SINE Alu 1 308 -4 2017 130 23 10 chr17 36989654 36989962 -52514591 + AluSx SINE Alu 1 312 0 1460 140 34 93 chr17 36989973 36990295 -52514258 + AluJb SINE Alu 1 303 -9 1975 69 91 22 chr17 36990446 36990721 -52513832 + AluSq SINE Alu 6 299 -14 198 0 0 0 chr17 36991667 36991689 -52512864 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3937 202 81 11 chr17 36991844 36992489 -52512064 + L1ME1 LINE L1 3685 4425 -1721 2082 134 0 3 chr17 36992489 36992788 -52511765 + AluSq SINE Alu 2 299 -14 3937 202 81 11 chr17 36992788 36993135 -52511418 + L1ME1 LINE L1 4425 4746 -1400 1300 217 115 38 chr17 36993153 36993359 -52511194 + L1ME1 LINE L1 4957 5146 -1020 1663 214 0 0 chr17 36993359 36993662 -52510891 + AluJo SINE Alu 1 303 -9 1300 217 115 38 chr17 36993662 36994322 -52510231 + L1ME1 LINE L1 5146 5960 -206 763 153 33 159 chr17 36994517 36994818 -52509735 + L1MC5 LINE L1 7403 7665 -296 301 290 75 11 chr17 36994819 36994912 -52509641 + HAL1b LINE L1 93 191 -1157 612 99 0 59 chr17 36994927 36995028 -52509525 + AluSg/x SINE Alu 213 307 -2 453 246 90 8 chr17 36995613 36995735 -52508818 + L2 LINE L2 3182 3313 0 2064 126 3 7 chr17 36995934 36996227 -52508326 - AluSx SINE Alu -20 292 1 22 0 0 0 chr17 36996697 36996719 -52507834 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr17 36997132 36997162 -52507391 + AT_rich Low_complexity Low_complexity 1 30 0 2019 75 93 11 chr17 36997162 36997441 -52507112 + AluY SINE Alu 1 302 -9 339 239 68 0 chr17 36997561 36997649 -52506904 + L1ME LINE L1 5732 5825 -296 2243 110 7 0 chr17 37001207 37001506 -52503047 + AluSq SINE Alu 1 301 -12 752 97 81 135 chr17 37002127 37002312 -52502241 - MER5B DNA MER1_type -3 175 1 2315 102 3 0 chr17 37002412 37002715 -52501838 + AluSx SINE Alu 1 304 -8 580 184 0 10 chr17 37003697 37003795 -52500758 - AluJ/FLAM SINE Alu -215 97 1 1680 191 7 3 chr17 37005223 37005522 -52499031 + AluJb SINE Alu 1 300 -12 372 242 81 60 chr17 37005863 37006012 -52498541 + L2 LINE L2 3162 3313 0 1114 161 6 0 chr17 37006228 37006396 -52498157 + FRAM SINE Alu 1 165 -11 547 200 122 9 chr17 37006589 37006704 -52497849 + FLAM_C SINE Alu 1 128 -5 374 251 274 22 chr17 37007151 37007330 -52497223 + MIR SINE MIR 6 229 -33 21 0 0 0 chr17 37008095 37008116 -52496437 + AT_rich Low_complexity Low_complexity 1 21 0 349 62 234 0 chr17 37008705 37008769 -52495784 + MADE1 DNA Mariner 2 80 0 356 248 10 30 chr17 37009281 37009382 -52495171 - MER5B DNA MER1_type -5 173 75 2323 99 3 3 chr17 37009865 37010178 -52494375 + AluSq SINE Alu 1 313 0 442 178 71 0 chr17 37010265 37010362 -52494191 + MER5A DNA MER1_type 4 100 -78 685 188 0 16 chr17 37010372 37010500 -52494053 + FLAM_C SINE Alu 7 132 -11 204 125 0 0 chr17 37012353 37012385 -52492168 + (A)n Simple_repeat Simple_repeat 1 32 0 2328 45 42 7 chr17 37013748 37014035 -52490518 - AluY SINE Alu -14 297 1 2741 214 90 12 chr17 37014300 37015414 -52489139 + L1ME3 LINE L1 4886 6106 -56 422 192 50 0 chr17 37015830 37015929 -52488624 + L1M4 LINE L1 3492 3595 -2551 533 243 80 42 chr17 37015982 37016270 -52488283 + L1MC5 LINE L1 7631 7929 -32 1974 146 0 7 chr17 37016288 37016590 -52487963 + AluSx SINE Alu 4 303 -9 1979 150 0 7 chr17 37016873 37017196 -52487357 + AluSx SINE Alu 1 321 0 242 316 105 38 chr17 37017314 37017447 -52487106 + MIR SINE MIR 50 191 -71 1646 150 0 93 chr17 37020266 37020399 -52484154 + AluJb SINE Alu 13 102 -210 2296 115 0 0 chr17 37020399 37020704 -52483849 + AluSx SINE Alu 1 305 -7 1646 150 0 93 chr17 37020704 37020883 -52483670 + AluJb SINE Alu 102 296 -16 2061 128 0 3 chr17 37021079 37021375 -52483178 + AluSq SINE Alu 1 295 -18 344 228 139 0 chr17 37021454 37021555 -52482998 - L2 LINE L2 -1 3271 3157 279 0 0 0 chr17 37021874 37021905 -52482648 + (CA)n Simple_repeat Simple_repeat 1 31 0 2117 139 3 0 chr17 37022069 37022086 -52482467 - AluSx SINE Alu -9 303 288 384 22 0 0 chr17 37022086 37022131 -52482422 + (TATG)n Simple_repeat Simple_repeat 2 46 0 2117 139 3 0 chr17 37022131 37022415 -52482138 - AluSx SINE Alu -24 288 1 1139 156 0 0 chr17 37022594 37022761 -52481792 + AluSg/x SINE Alu 136 302 -8 198 103 0 0 chr17 37023119 37023148 -52481405 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 1924 148 17 10 chr17 37023765 37024062 -52480491 + AluSx SINE Alu 1 299 -13 473 320 0 47 chr17 37024525 37024697 -52479856 - MER5A DNA MER1_type 0 189 26 2232 99 3 0 chr17 37024773 37025081 -52479472 - AluSp SINE Alu 0 309 1 225 36 0 0 chr17 37025416 37025444 -52479109 + U6 snRNA snRNA 1 28 -79 2057 153 7 0 chr17 37025589 37025896 -52478657 - AluJb SINE Alu -2 310 2 2044 125 0 24 chr17 37025964 37026260 -52478293 + AluSx SINE Alu 1 289 -23 415 240 273 26 chr17 37026423 37026577 -52477976 + MIR SINE MIR 3 194 -68 244 178 0 0 chr17 37027327 37027372 -52477181 + MER97b DNA MER1_type? 535 579 -474 1124 65 59 24 chr17 37027400 37027570 -52476983 - MER30 DNA MER1_type -54 176 1 1576 176 40 18 chr17 37029051 37029358 -52475195 - AluJo SINE Alu 0 313 1 866 213 11 5 chr17 37029880 37030068 -52474485 + MER5A DNA MER1_type 1 189 0 2269 116 7 3 chr17 37030111 37030421 -52474132 + AluSq SINE Alu 1 311 -2 2281 117 0 0 chr17 37030432 37030732 -52473821 + AluSx SINE Alu 1 300 -12 1681 159 3 43 chr17 37031288 37031590 -52472963 - AluJo SINE Alu -11 301 12 2513 59 0 3 chr17 37031837 37032142 -52472411 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 37032213 37032234 -52472319 + AT_rich Low_complexity Low_complexity 1 21 0 731 196 0 0 chr17 37032510 37032643 -52471910 + FLAM_A SINE Alu 1 133 0 2206 102 10 3 chr17 37032663 37032958 -52471595 + AluSx SINE Alu 1 297 -15 2139 103 25 0 chr17 37033169 37033450 -52471103 + AluSx SINE Alu 1 288 -24 1940 153 27 0 chr17 37034660 37034961 -52469592 + AluSq SINE Alu 1 309 -4 1997 122 0 21 chr17 37034961 37035282 -52469271 + AluSg1 SINE Alu 1 315 0 2040 104 0 11 chr17 37035294 37035572 -52468981 + AluSx SINE Alu 1 275 -37 732 264 101 44 chr17 37036209 37036501 -52468052 + L1MC5 LINE L1 7246 7520 -441 2270 88 0 0 chr17 37036501 37036784 -52467769 - AluSx SINE Alu -29 283 1 732 264 101 44 chr17 37036784 37037142 -52467411 + L1MC5 LINE L1 7520 7917 -44 2122 107 7 0 chr17 37037277 37037568 -52466985 - AluSc SINE Alu -16 293 1 35 54 0 0 chr17 37037683 37037739 -52466814 + AT_rich Low_complexity Low_complexity 1 56 0 197 318 0 0 chr17 37037800 37037844 -52466709 + L2 LINE L2 3210 3253 -19 2171 117 0 3 chr17 37038214 37038497 -52466056 + AluSx SINE Alu 1 282 -30 354 288 180 44 chr17 37038545 37038861 -52465692 + L1M4 LINE L1 5039 5397 -749 192 265 88 15 chr17 37040373 37040441 -52464112 - MIR SINE MIR -184 78 6 376 294 114 67 chr17 37040868 37041211 -52463342 + HAL1 LINE L1 712 1070 -1437 * 390 253 224 47 chr17 37041194 37041401 -52463152 + HAL1 LINE L1 1816 2086 -421 2104 123 16 29 chr17 37041401 37041717 -52462836 + AluSx SINE Alu 1 312 0 390 253 224 47 chr17 37041717 37041786 -52462767 + HAL1 LINE L1 2086 2141 -366 1750 168 0 55 chr17 37042020 37042329 -52462224 - AluJb SINE Alu -20 292 1 1891 146 43 9 chr17 37042357 37042686 -52461867 + MER2 DNA MER2_type 1 340 -5 335 279 91 78 chr17 37042693 37042847 -52461706 + HAL1 LINE L1 2352 2507 0 216 0 0 0 chr17 37043379 37043403 -52461150 + (A)n Simple_repeat Simple_repeat 1 24 0 903 195 34 136 chr17 37044792 37045146 -52459407 + L2 LINE L2 2996 3313 0 213 186 23 0 chr17 37045408 37045451 -52459102 + L2 LINE L2 3254 3297 -16 293 317 87 44 chr17 37046709 37046892 -52457661 + MIR SINE MIR 34 224 -38 751 188 41 0 chr17 37046922 37047092 -52457461 + MER104 DNA MER2_type 1 177 -3 1765 131 0 0 chr17 37047131 37047367 -52457186 - AluSx SINE Alu -76 236 1 2353 87 3 3 chr17 37047684 37047983 -52456570 + AluSx SINE Alu 1 299 -13 1700 173 3 24 chr17 37049821 37050116 -52454437 - AluJo SINE Alu -23 289 1 422 192 14 27 chr17 37050205 37050278 -52454275 - AluJo SINE Alu -30 282 211 985 142 25 12 chr17 37050278 37050440 -52454113 - AluJo SINE Alu -138 174 11 2048 145 0 16 chr17 37050563 37050880 -52453673 + AluSx SINE Alu 1 312 0 870 162 0 22 chr17 37051152 37051288 -52453265 - FLAM_C SINE Alu 0 133 1 501 258 31 43 chr17 37051403 37051566 -52452987 - MIR SINE MIR -75 187 27 24 53 0 0 chr17 37053174 37053212 -52451341 + AT_rich Low_complexity Low_complexity 1 38 0 2077 133 0 20 chr17 37053290 37053590 -52450963 + AluSx SINE Alu 2 295 -17 613 321 89 9 chr17 37053606 37053830 -52450723 - MIR SINE MIR -15 247 6 1335 183 52 2 chr17 37053928 37054181 -52450372 + L1MD3 LINE L1 7517 7967 0 2588 48 0 13 chr17 37054181 37054496 -52450057 + AluY SINE Alu 1 311 0 23 92 0 0 chr17 37054936 37055001 -52449552 + AT_rich Low_complexity Low_complexity 1 65 0 615 285 54 18 chr17 37055291 37055512 -52449041 - MIR SINE MIR -14 248 20 1321 165 9 14 chr17 37055521 37055739 -52448814 - MER20 DNA MER1_type 0 219 3 225 0 0 0 chr17 37055968 37055993 -52448560 + (T)n Simple_repeat Simple_repeat 1 25 0 1530 181 49 21 chr17 37056159 37056447 -52448106 + AluJo SINE Alu 1 296 -16 23 0 0 0 chr17 37056448 37056471 -52448082 + AT_rich Low_complexity Low_complexity 1 23 0 302 315 125 5 chr17 37056929 37057113 -52447440 - MIR SINE MIR 0 262 57 186 171 0 0 chr17 37057616 37057657 -52446896 + T-rich Low_complexity Low_complexity 1 41 0 252 0 0 0 chr17 37057740 37057768 -52446785 + (TG)n Simple_repeat Simple_repeat 1 28 0 522 111 0 0 chr17 37057786 37057858 -52446695 - AluS SINE Alu -240 73 2 378 325 79 31 chr17 37057890 37058118 -52446435 + MIR SINE MIR 14 252 -10 651 212 88 7 chr17 37058305 37058442 -52446111 + MER96 DNA MER1_type? 1 148 -27 1622 183 0 50 chr17 37059555 37059724 -52444829 - AluJo SINE Alu -11 301 154 2395 80 0 3 chr17 37059724 37060023 -52444530 - AluY SINE Alu -13 298 1 1622 183 0 50 chr17 37060023 37060170 -52444383 - AluJo SINE Alu -158 154 1 2174 120 3 10 chr17 37060202 37060511 -52444042 + AluSx SINE Alu 1 307 -5 1400 176 34 0 chr17 37060908 37061002 -52443551 + AluJo SINE Alu 35 124 -188 2345 91 0 3 chr17 37061002 37061300 -52443253 + AluY SINE Alu 1 297 -14 1400 176 34 0 chr17 37061300 37061444 -52443109 + AluJo SINE Alu 124 281 -31 192 77 0 0 chr17 37061449 37061475 -52443078 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr17 37061942 37061970 -52442583 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr17 37062854 37062874 -52441679 + (A)n Simple_repeat Simple_repeat 1 20 0 2304 101 3 0 chr17 37063444 37063742 -52440811 + AluSq SINE Alu 1 299 -14 558 248 59 62 chr17 37063795 37064102 -52440451 + L1MC5 LINE L1 7623 7928 -33 2143 132 0 0 chr17 37064110 37064406 -52440147 + AluSx SINE Alu 2 297 -15 2417 92 0 13 chr17 37065099 37065439 -52439114 + AluSp SINE Alu 1 336 0 1423 171 84 31 chr17 37065444 37065731 -52438822 + AluJb SINE Alu 1 302 -10 254 162 0 0 chr17 37065803 37065840 -52438713 - Alu SINE Alu -264 38 2 2112 124 0 0 chr17 37065877 37066167 -52438386 - AluSx SINE Alu -16 296 7 1837 166 0 3 chr17 37066240 37066541 -52438012 + AluJb SINE Alu 1 300 -12 28 0 0 0 chr17 37066545 37066573 -52437980 + AT_rich Low_complexity Low_complexity 1 28 0 672 191 73 59 chr17 37066884 37067088 -52437465 - L1MC5 LINE L1 -1045 6916 6710 1934 149 29 0 chr17 37067874 37068189 -52436364 + MER33 DNA MER1_type 1 324 0 1772 83 4 0 chr17 37068642 37068870 -52435683 + AluSp SINE Alu 71 299 -14 407 269 11 11 chr17 37068963 37069056 -52435497 + MER58 DNA MER1_type 1 93 -293 1019 156 0 11 chr17 37069081 37069325 -52435228 + AluSx SINE Alu 2 304 -6 1133 148 56 84 chr17 37069328 37069612 -52434941 + MER58 DNA MER1_type 2144 2419 -1 5793 153 90 74 chr17 37069784 37070267 -52434286 - Charlie1a DNA MER1_type -1307 1454 980 2205 120 0 7 chr17 37070267 37070576 -52433977 + AluSx SINE Alu 3 309 -3 5793 153 90 74 chr17 37070576 37070713 -52433840 - Charlie1a DNA MER1_type -1781 980 847 2150 127 0 19 chr17 37070713 37071027 -52433526 - AluSx SINE Alu -4 308 1 5793 153 90 74 chr17 37071027 37071813 -52432740 - Charlie1a DNA MER1_type -1914 847 24 23 54 0 0 chr17 37072520 37072557 -52431996 + AT_rich Low_complexity Low_complexity 1 37 0 246 231 92 0 chr17 37072835 37072900 -52431653 - MIR SINE MIR -101 107 37 523 314 35 6 chr17 37072907 37073079 -52431474 + MER5B DNA MER1_type 1 177 -1 737 202 27 90 chr17 37075034 37075079 -52429474 + MER5B DNA MER1_type 1 47 -131 1931 162 0 16 chr17 37075079 37075387 -52429166 - AluJb SINE Alu -9 303 1 737 202 27 90 chr17 37075387 37075529 -52429024 + MER5B DNA MER1_type 47 176 -2 1803 93 31 4 chr17 37077204 37077462 -52427091 - L1MA3 LINE L1 0 6305 6041 2088 114 7 0 chr17 37077811 37078112 -52426441 + AluSx SINE Alu 1 303 0 909 176 26 0 chr17 37078137 37078290 -52426263 + FRAM SINE Alu 3 159 -17 26 30 0 0 chr17 37078290 37078323 -52426230 + AT_rich Low_complexity Low_complexity 1 33 0 1198 129 0 0 chr17 37079179 37079350 -52425203 + AluJo SINE Alu 1 171 -141 555 210 0 0 chr17 37079352 37079452 -52425101 - AluSp SINE Alu -82 231 132 1930 138 14 0 chr17 37079455 37079744 -52424809 - AluSq SINE Alu -5 308 16 602 174 37 0 chr17 37080174 37080283 -52424270 + L1MB5 LINE L1 6062 6174 0 2508 44 24 0 chr17 37080434 37080730 -52423823 + AluY SINE Alu 1 303 -8 904 136 0 0 chr17 37082210 37082350 -52422203 + FLAM_C SINE Alu 1 140 -3 207 186 0 0 chr17 37083222 37083265 -52421288 + G-rich Low_complexity Low_complexity 1 43 0 318 283 203 0 chr17 37083774 37083912 -52420641 + MIR SINE MIR 49 214 -48 521 171 246 42 chr17 37084290 37084407 -52420146 + L1ME4a LINE L1 5819 5911 -210 2098 135 3 0 chr17 37084407 37084710 -52419843 + AluSx SINE Alu 1 304 -8 521 171 246 42 chr17 37084710 37084832 -52419721 + L1ME4a LINE L1 5911 6107 -14 254 288 0 0 chr17 37085184 37085243 -52419310 - L2 LINE L2 -673 2641 2583 280 271 250 32 chr17 37085244 37085387 -52419166 - MIR SINE MIR -3 259 148 1852 66 0 13 chr17 37085387 37085615 -52418938 + AluY SINE Alu 1 225 -86 267 79 0 0 chr17 37085615 37085653 -52418900 + (CA)n Simple_repeat Simple_repeat 1 38 0 280 271 250 32 chr17 37085653 37085696 -52418857 - MIR SINE MIR -113 149 31 298 295 214 34 chr17 37085710 37086066 -52418487 - L2 LINE L2 -864 2450 2031 333 344 119 4 chr17 37086194 37086439 -52418114 - L2 LINE L2 -1328 1986 1710 1905 151 10 0 chr17 37086439 37086731 -52417822 - AluJb SINE Alu -17 295 1 219 248 133 29 chr17 37086764 37086869 -52417684 + L2 LINE L2 2160 2275 -1039 968 187 13 7 chr17 37086942 37087091 -52417462 + FRAM SINE Alu 1 151 -10 366 23 0 0 chr17 37087091 37087134 -52417419 + (GA)n Simple_repeat Simple_repeat 2 44 0 2254 128 0 0 chr17 37087210 37087560 -52416993 + AluSx SINE Alu 1 350 0 397 228 65 41 chr17 37087662 37087785 -52416768 + MIR SINE MIR 110 235 -27 433 269 59 43 chr17 37087837 37087946 -52416607 + L2 LINE L2 2432 2547 -767 2242 85 37 0 chr17 37087946 37088240 -52416313 + AluSg1 SINE Alu 1 305 -4 433 269 59 43 chr17 37088240 37088316 -52416237 + L2 LINE L2 2547 2620 -694 231 128 13 154 chr17 37088362 37088409 -52416144 - L1ME3A LINE L1 -2 6168 6135 2146 120 3 7 chr17 37088409 37088717 -52415836 + AluSx SINE Alu 1 307 -5 231 128 13 154 chr17 37088717 37088747 -52415806 - L1ME3A LINE L1 -35 6135 6102 602 274 106 75 chr17 37088764 37088803 -52415750 + L2 LINE L2 2677 2713 -600 2256 90 17 0 chr17 37088803 37089093 -52415460 + AluSq SINE Alu 1 295 -18 426 53 0 0 chr17 37089093 37089150 -52415403 + (TA)n Simple_repeat Simple_repeat 1 57 0 602 274 106 75 chr17 37089150 37089494 -52415059 + L2 LINE L2 2712 3069 -244 2107 119 0 32 chr17 37089531 37089843 -52414710 - AluSg SINE Alu -8 302 1 2103 107 3 3 chr17 37089848 37090138 -52414415 - AluSp SINE Alu -5 308 19 432 184 20 20 chr17 37090414 37090512 -52414041 + LTR67 LTR ERVL 458 555 -2 730 231 74 44 chr17 37093550 37093779 -52410774 - MIR SINE MIR -14 248 13 2264 120 0 0 chr17 37096112 37096421 -52408132 - AluSx SINE Alu -3 309 1 2011 157 0 3 chr17 37096890 37097196 -52407357 - AluJb SINE Alu -7 305 1 1528 151 48 19 chr17 37097221 37097492 -52407061 - AluJo SINE Alu -20 292 14 1482 165 102 18 chr17 37097542 37097827 -52406726 - AluJo SINE Alu -3 309 1 1898 81 119 8 chr17 37097836 37098097 -52406456 - AluSg1 SINE Alu -19 290 1 287 300 67 25 chr17 37098226 37098346 -52406207 - MIR3 SINE MIR -76 132 8 2075 107 0 4 chr17 37098503 37098774 -52405779 - AluSg SINE Alu -40 270 1 1059 170 0 0 chr17 37098776 37098941 -52405612 - AluSg/x SINE Alu -20 292 128 2032 102 0 59 chr17 37099257 37099560 -52404993 + AluSq SINE Alu 1 317 0 219 31 0 31 chr17 37099560 37099592 -52404961 + (TAAA)n Simple_repeat Simple_repeat 2 108 0 419 283 105 27 chr17 37099996 37100215 -52404338 - L1M4 LINE L1 -2936 3210 2975 988 132 0 22 chr17 37100632 37100814 -52403739 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1757 88 0 4 chr17 37100827 37101054 -52403499 - AluSc SINE Alu -11 298 73 180 0 0 0 chr17 37101054 37101074 -52403479 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr17 37101255 37101283 -52403270 + AT_rich Low_complexity Low_complexity 1 28 0 348 115 16 0 chr17 37101283 37101344 -52403209 - L1PB1 LINE L1 0 6151 6090 32723 97 9 8 chr17 37101346 37106943 -52397610 - L1PA7 LINE L1 -11 7581 1148 292 308 0 0 chr17 37106966 37107057 -52397496 + HsTC2 DNA Tc2 36 126 -1772 1939 153 3 0 chr17 37107244 37107538 -52397015 - AluJb SINE Alu -17 295 1 260 319 88 0 chr17 37107921 37108012 -52396541 - MIR SINE MIR -62 200 102 1711 35 5 10 chr17 37109064 37109265 -52395288 - L1PA4 LINE L1 -5 6150 5951 1389 184 26 71 chr17 37109304 37109614 -52394939 - AluJb SINE Alu -16 296 1 1906 181 70 5 chr17 37109739 37110138 -52394415 - L1MC3 LINE L1 -7 7778 7354 1101 199 61 64 chr17 37110138 37110434 -52394119 - MER49 LTR ERV1 0 923 627 2115 115 3 7 chr17 37110434 37110729 -52393824 - AluSx SINE Alu -18 294 1 1101 199 61 64 chr17 37110729 37110774 -52393779 - MER49 LTR ERV1 -296 627 583 3835 158 5 2 chr17 37110775 37111384 -52393169 - MER49 LTR ERV1 -304 619 9 1667 204 89 33 chr17 37111393 37111820 -52392733 - L1MC3 LINE L1 -429 7356 6906 7843 84 10 9 chr17 37111822 37112625 -52391928 - L1PA8 LINE L1 0 6172 5371 2162 121 3 0 chr17 37112625 37112922 -52391631 - AluSx SINE Alu -14 298 1 7843 84 10 9 chr17 37112922 37113965 -52390588 - L1PA8 LINE L1 -801 5371 4316 628 119 129 0 chr17 37113965 37114066 -52390487 - L1MD3 LINE L1 -1168 6827 6714 1159 229 35 3 chr17 37114130 37114444 -52390109 + MER33 DNA MER1_type 1 324 0 1155 174 27 49 chr17 37114509 37114733 -52389820 + MER20 DNA MER1_type 1 219 0 2396 84 7 3 chr17 37115250 37115558 -52388995 + AluSq SINE Alu 1 309 -4 894 176 6 6 chr17 37115560 37115736 -52388817 + AluSg/x SINE Alu 135 310 0 208 198 12 99 chr17 37117080 37117161 -52387392 + MIR3 SINE MIR 110 183 -25 185 271 0 51 chr17 37117846 37117905 -52386648 + MIR SINE MIR 58 113 -95 2405 78 0 7 chr17 37118526 37118833 -52385720 + AluY SINE Alu 1 305 -6 1062 41 0 0 chr17 37118919 37119042 -52385511 + AluY SINE Alu 181 303 -8 192 40 0 0 chr17 37119172 37119197 -52385356 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1106 165 147 27 chr17 37119411 37119581 -52384972 - AluJo SINE Alu 0 315 106 348 24 0 0 chr17 37119581 37119622 -52384931 + (TG)n Simple_repeat Simple_repeat 2 42 0 1106 165 147 27 chr17 37119622 37119708 -52384845 - AluJo SINE Alu -209 106 32 2748 183 60 1 chr17 37120448 37120995 -52383558 - L1MB7 LINE L1 -19 6165 5581 2412 68 0 3 chr17 37121196 37121490 -52383063 + AluY SINE Alu 1 293 -18 24 53 0 0 chr17 37121497 37121535 -52383018 + AT_rich Low_complexity Low_complexity 1 38 0 2190 92 0 7 chr17 37122546 37122828 -52381725 + AluY SINE Alu 1 280 -31 2216 177 94 24 chr17 37122828 37123286 -52381267 - LTR2B LTR ERV1 0 490 1 39170 89 14 13 chr17 37123286 37129010 -52375543 - Harlequin LTR ERV1 0 6896 1169 1450 179 0 0 chr17 37129122 37129368 -52375185 + AluJb SINE Alu 66 311 -1 1300 100 12 0 chr17 37129828 37129998 -52374555 - AluSg/x SINE Alu -15 295 124 2487 72 0 0 chr17 37129998 37130304 -52374249 - AluY SINE Alu -5 306 1 288 180 250 50 chr17 37130385 37130485 -52374068 - MIR3 SINE MIR -15 193 74 206 121 0 0 chr17 37130626 37130659 -52373894 + (T)n Simple_repeat Simple_repeat 1 33 0 190 0 67 0 chr17 37130961 37130991 -52373562 + (TA)n Simple_repeat Simple_repeat 2 33 0 257 186 52 0 chr17 37131008 37131105 -52373448 + (TA)n Simple_repeat Simple_repeat 2 103 0 995 187 25 102 chr17 37131296 37131455 -52373098 - MER20 DNA MER1_type 0 219 82 2146 114 7 3 chr17 37131455 37131752 -52372801 + AluSx SINE Alu 1 298 -14 995 187 25 102 chr17 37131752 37131827 -52372726 - MER20 DNA MER1_type -137 82 3 323 311 0 0 chr17 37132699 37132789 -52371764 + L1MC4 LINE L1 6614 6703 -1339 2883 37 0 0 chr17 37132801 37133127 -52371426 - LTR17 LTR ERV1 -454 326 1 7918 42 1 32 chr17 37133130 37134107 -52370446 - HERV17 LTR ERV1 -4 8622 7676 180 77 0 0 chr17 37134820 37134846 -52369707 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2262 98 0 0 chr17 37134846 37135131 -52369422 - AluSx SINE Alu -27 285 1 269 313 72 49 chr17 37135206 37135421 -52369132 - L2 LINE L2 -274 2998 2768 265 125 0 0 chr17 37138032 37138072 -52366481 - HSMAR1 DNA Mariner -1247 40 1 322 145 24 121 chr17 37139263 37139346 -52365207 + HAL1 LINE L1 2427 2501 -6 623 251 11 38 chr17 37139450 37139591 -52364962 + MER5B DNA MER1_type 1 137 -41 1697 169 0 36 chr17 37139591 37139892 -52364661 + AluJo SINE Alu 1 290 -22 623 251 11 38 chr17 37139892 37139933 -52364620 + MER5B DNA MER1_type 137 178 0 510 264 21 36 chr17 37139971 37140111 -52364442 + L2 LINE L2 3127 3264 -8 2355 100 3 0 chr17 37140567 37140866 -52363687 + AluSp SINE Alu 1 300 -13 256 214 180 11 chr17 37141070 37141159 -52363394 + MLT1J2 LTR MaLR 41 144 -405 300 227 76 33 chr17 37141330 37141456 -52363097 + MLT1J2 LTR MaLR 339 450 0 196 286 71 20 chr17 37142341 37142439 -52362114 - MIR SINE MIR -4 258 156 668 290 11 72 chr17 37142464 37142656 -52361897 + MIR SINE MIR 17 219 -43 1590 201 0 10 chr17 37142656 37142964 -52361589 + AluJb SINE Alu 1 305 -7 668 290 11 72 chr17 37142964 37142975 -52361578 + MIR SINE MIR 219 229 -33 2151 112 0 7 chr17 37142975 37143290 -52361263 + AluSx SINE Alu 3 315 0 668 290 11 72 chr17 37143290 37143346 -52361207 + MIR SINE MIR 229 262 0 430 264 18 86 chr17 37143341 37143396 -52361157 - MIR SINE MIR -110 152 95 * 1386 209 35 39 chr17 37143396 37143679 -52360874 + AluJo SINE Alu 1 282 -30 258 105 0 0 chr17 37143682 37143720 -52360833 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 430 264 18 86 chr17 37143720 37143823 -52360730 - MIR SINE MIR -169 93 1 204 40 0 0 chr17 37144489 37144514 -52360039 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 1627 245 113 22 chr17 37144693 37144761 -52359792 + MER34 LTR ERV1 1 61 -481 1459 126 36 5 chr17 37144761 37144983 -52359570 + L1PB2 LINE L1 5918 6146 -5 1627 245 113 22 chr17 37144983 37145408 -52359145 + MER34 LTR ERV1 61 539 -3 713 229 133 30 chr17 37145713 37145984 -52358569 + MER34-int LTR ERV1 311 609 -5722 1893 148 3 3 chr17 37145984 37146349 -52358204 - AluSx SINE Alu 0 366 2 302 145 105 66 chr17 37146352 37146428 -52358125 + MER34-int LTR ERV1 1417 1495 -4836 609 189 87 32 chr17 37146570 37146755 -52357798 + MER31-int LTR ERV1 995 1189 -3747 317 267 11 11 chr17 37146772 37146862 -52357691 + MER5B DNA MER1_type 86 175 -3 1536 203 0 13 chr17 37148200 37148501 -52356052 - AluJb SINE Alu -15 297 1 1891 155 16 7 chr17 37148557 37148861 -52355692 - AluJb SINE Alu -1 311 5 1798 159 14 10 chr17 37149276 37149396 -52355157 + AluJo SINE Alu 1 119 -193 324 0 0 0 chr17 37149396 37149432 -52355121 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2086 139 0 0 chr17 37149439 37149740 -52354813 + AluSx SINE Alu 1 301 -11 1798 159 14 10 chr17 37149740 37149906 -52354647 + AluJo SINE Alu 124 296 -16 2159 98 26 20 chr17 37149906 37150211 -52354342 + AluSp SINE Alu 1 307 -6 418 255 292 16 chr17 37150227 37150419 -52354134 + MIR SINE MIR 15 259 -3 714 307 85 70 chr17 37150797 37151020 -52353533 + L2 LINE L2 2509 2727 -545 2250 88 0 7 chr17 37151020 37151315 -52353238 - AluSc SINE Alu -16 293 1 2037 121 32 0 chr17 37151315 37151596 -52352957 - AluSx SINE Alu -22 290 1 714 307 85 70 chr17 37151596 37152075 -52352478 + L2 LINE L2 2726 3270 -2 1774 168 33 3 chr17 37152482 37152785 -52351768 - AluSq SINE Alu -1 312 1 2133 102 20 7 chr17 37152938 37153231 -52351322 - AluSx SINE Alu -15 297 1 9819 66 5 2 chr17 37153347 37154563 -52349990 - HERVL-A1 LTR ERVL -317 5337 4119 8622 62 10 0 chr17 37154566 37155628 -52348925 - HERVL-A1 LTR ERVL -4581 1073 1 3358 84 18 11 chr17 37155628 37156069 -52348484 - MLT2A1 LTR ERVL 0 444 1 1315 246 134 0 chr17 37156070 37156384 -52348169 + L1ME1 LINE L1 5682 6065 -101 273 29 0 0 chr17 37156384 37156418 -52348135 + (TG)n Simple_repeat Simple_repeat 1 34 0 1315 246 134 0 chr17 37156418 37156513 -52348040 + L1ME1 LINE L1 6065 6146 -20 1959 141 0 17 chr17 37156797 37157094 -52347459 - AluJb SINE Alu -20 292 1 305 283 69 0 chr17 37157188 37157333 -52347220 - L1M4 LINE L1 -1197 4949 4795 236 250 31 10 chr17 37157418 37157514 -52347039 - L1M4 LINE L1 -1492 4654 4557 863 98 0 0 chr17 37157521 37157633 -52346920 - AluSq SINE Alu -17 296 185 519 62 0 0 chr17 37157633 37157697 -52346856 - AluSq SINE Alu -215 98 35 21 0 0 0 chr17 37157749 37157770 -52346783 + AT_rich Low_complexity Low_complexity 1 21 0 495 254 166 16 chr17 37157865 37158058 -52346495 + LTR50 LTR ERVL 574 795 0 351 278 39 53 chr17 37158137 37158418 -52346135 + L1M4 LINE L1 4101 4377 -1769 1565 236 40 69 chr17 37158445 37158836 -52345717 - L1MEc LINE L1 -4279 2117 1717 2321 67 0 3 chr17 37158836 37159119 -52345434 + AluSq SINE Alu 1 282 -31 251 28 28 0 chr17 37159122 37159158 -52345395 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1565 236 40 69 chr17 37159158 37159330 -52345223 - L1MEc LINE L1 -4681 1715 1566 320 250 83 88 chr17 37159419 37159635 -52344918 + L1ME4a LINE L1 5833 6047 -74 1345 138 46 72 chr17 37160264 37160449 -52344104 - AluJb SINE Alu -15 297 122 279 0 0 0 chr17 37160449 37160480 -52344073 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1345 138 46 72 chr17 37160480 37160599 -52343954 - AluJb SINE Alu -190 122 1 1132 178 158 0 chr17 37161341 37161460 -52343093 + AluJo SINE Alu 1 100 -212 254 50 25 0 chr17 37161460 37161500 -52343053 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1132 178 158 0 chr17 37161500 37161621 -52342932 + AluJo SINE Alu 100 279 -33 271 23 45 23 chr17 37161623 37161667 -52342886 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 316 335 93 6 chr17 37162890 37163072 -52341481 - MIR SINE MIR -14 248 51 280 313 93 70 chr17 37163151 37163365 -52341188 + L2 LINE L2 1881 2099 -1215 282 335 112 58 chr17 37163496 37163774 -52340779 + L2 LINE L2 2980 3272 0 329 344 17 28 chr17 37165901 37166081 -52338472 - MER5B DNA MER1_type 0 178 1 2322 67 0 0 chr17 37166782 37167096 -52337457 + AluY SINE Alu 1 314 0 996 249 98 30 chr17 37169015 37169384 -52335169 - L1MEc LINE L1 -5649 556 163 2220 113 10 0 chr17 37169748 37170050 -52334503 + AluSx SINE Alu 1 305 -7 1133 180 86 112 chr17 37170188 37170572 -52333981 + MLT1B LTR MaLR 1 374 -16 27 29 0 0 chr17 37171119 37171153 -52333400 + AT_rich Low_complexity Low_complexity 1 34 0 916 173 12 23 chr17 37171397 37171570 -52332983 - FRAM SINE Alu -10 166 1 388 169 102 36 chr17 37171679 37171791 -52332762 - L1MC3 LINE L1 -1 7778 6254 21 0 0 0 chr17 37172063 37172084 -52332469 + AT_rich Low_complexity Low_complexity 1 21 0 1049 206 61 16 chr17 37172087 37172334 -52332219 + AluJo SINE Alu 42 299 -13 2367 200 67 21 chr17 37172442 37173021 -52331532 - L1MC4 LINE L1 -139 7903 7298 189 0 0 0 chr17 37173022 37173043 -52331510 + (TG)n Simple_repeat Simple_repeat 1 21 0 262 288 89 14 chr17 37173110 37173256 -52331297 + L1M4 LINE L1 2750 2906 -3240 603 254 40 42 chr17 37173279 37173574 -52330979 + L1M4 LINE L1 3547 3830 -2316 799 204 17 17 chr17 37173582 37173758 -52330795 + AluJo SINE Alu 120 295 -17 681 235 16 22 chr17 37173758 37173941 -52330612 + L1M4 LINE L1 3844 4025 -2121 1301 167 23 0 chr17 37173947 37174062 -52330491 + AluJo SINE Alu 7 118 -194 204 40 0 0 chr17 37174062 37174087 -52330466 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1301 167 23 0 chr17 37174087 37174192 -52330361 + AluJo SINE Alu 118 232 -80 1227 152 116 83 chr17 37174620 37174922 -52329631 - AluJb SINE Alu 0 312 1 2069 122 0 25 chr17 37174930 37174995 -52329558 - AluSq SINE Alu 0 584 519 1017 88 6 28 chr17 37174995 37175177 -52329376 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2069 122 0 25 chr17 37175177 37175522 -52329031 - AluSq SINE Alu -65 519 1 3398 97 95 6 chr17 37176825 37177339 -52327214 + MER51A LTR ERV1 75 634 0 1122 86 34 46 chr17 37177339 37177514 -52327039 + MER51A-int LTR ERV1 1 173 -7643 * 4452 168 9 21 chr17 37177511 37178302 -52326251 + MER51A-int LTR ERV1 334 1114 -6702 1991 91 115 3 chr17 37178301 37178597 -52325956 + MER57-int LTR ERV1 5610 5938 -1599 * 3872 117 46 5 chr17 37178595 37179160 -52325393 + MER57-int LTR ERV1 6560 7147 -390 549 114 80 0 chr17 37179163 37179251 -52325302 + LTR54B LTR ERV1 5 99 -399 605 78 22 22 chr17 37179251 37179341 -52325212 + MER57-int LTR ERV1 7265 7354 -183 248 289 41 21 chr17 37181293 37181390 -52323163 + L1ME4a LINE L1 5552 5650 -471 340 206 119 24 chr17 37181754 37181880 -52322673 + L1ME4a LINE L1 5706 5843 -278 279 318 0 0 chr17 37182174 37182237 -52322316 + L1M4 LINE L1 1 63 -6078 715 265 109 32 chr17 37182579 37183032 -52321521 + L1M4 LINE L1 55 766 -5446 * 5635 140 20 37 chr17 37183027 37184241 -52320312 + L1MA8 LINE L1 4926 6112 -179 1520 214 0 30 chr17 37184241 37184544 -52320009 - AluJo SINE Alu -18 294 1 5635 140 20 37 chr17 37184544 37184721 -52319832 + L1MA8 LINE L1 6112 6291 0 240 193 0 46 chr17 37184721 37184786 -52319767 + L1M4 LINE L1 751 805 -5303 214 124 103 69 chr17 37185025 37185170 -52319383 + (CTTAA)n Simple_repeat Simple_repeat 1 150 0 1980 188 48 11 chr17 37185496 37185848 -52318705 - MLT1A1 LTR MaLR 0 365 1 2351 72 0 10 chr17 37187710 37188015 -52316538 + AluSc SINE Alu 1 302 -7 2331 74 0 3 chr17 37188291 37188619 -52315934 - AluSx SINE Alu 0 328 2 327 321 0 37 chr17 37189469 37189631 -52314922 - MLT1K LTR MaLR -13 575 420 1114 263 45 42 chr17 37189661 37190413 -52314140 - L1ME LINE L1 -413 5691 4943 1396 167 31 0 chr17 37190433 37190661 -52313892 + AluSx SINE Alu 49 283 -29 237 108 0 0 chr17 37190667 37190704 -52313849 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 2347 134 15 50 chr17 37190859 37191262 -52313291 - Tigger2a DNA MER2_type -45 389 1 2017 280 86 35 chr17 37191331 37192012 -52312541 - L1ME LINE L1 -1389 4691 3921 695 59 0 0 chr17 37192012 37192097 -52312456 + L1PA6 LINE L1 6068 6152 -2 2017 280 86 35 chr17 37192097 37192616 -52311937 - L1ME LINE L1 -2159 3921 3430 836 262 16 0 chr17 37192618 37192801 -52311752 - AluJb SINE Alu -21 291 106 6086 163 13 3 chr17 37193038 37194961 -52309592 - L1PB2 LINE L1 -2 6149 4207 5431 165 29 14 chr17 37194951 37195772 -52308781 - L1 LINE L1 -1519 4627 3786 * 2256 113 0 3 chr17 37195772 37196081 -52308472 - AluSq SINE Alu -5 308 1 5431 165 29 14 chr17 37196081 37196298 -52308255 - L1 LINE L1 -2360 3786 3574 259 289 76 41 chr17 37196290 37196605 -52307948 - L1ME LINE L1 -5032 1229 904 * 313 289 128 34 chr17 37196671 37196937 -52307616 - L1ME LINE L1 -5251 819 529 333 320 24 24 chr17 37197450 37197575 -52306978 - L1ME LINE L1 -5940 130 6 24 0 0 0 chr17 37197585 37197609 -52306944 + AT_rich Low_complexity Low_complexity 1 24 0 737 244 69 20 chr17 37199056 37199302 -52305251 + HAL1b LINE L1 403 660 -688 255 54 0 0 chr17 37199863 37199900 -52304653 - MER74B LTR ERVL -585 37 1 839 283 9 9 chr17 37199955 37200185 -52304368 - HERVL74 LTR ERVL -80 5605 5376 793 224 127 16 chr17 37200199 37200444 -52304109 - HERVL74 LTR ERVL -452 5233 4962 1464 204 7 0 chr17 37200445 37200724 -52303829 - AluJo SINE Alu -4 308 28 831 192 34 0 chr17 37200582 37200728 -52303825 - AluJo SINE Alu -141 171 21 * 2495 202 63 30 chr17 37200724 37201115 -52303438 - HERVL74 LTR ERVL -4001 1684 1267 2279 94 0 0 chr17 37201115 37201401 -52303152 - AluSq SINE Alu -23 290 5 2495 202 63 30 chr17 37201401 37201629 -52302924 - HERVL74 LTR ERVL -4418 1267 1048 1661 167 20 36 chr17 37203866 37204171 -52300382 + AluJb SINE Alu 1 300 -12 1965 184 70 27 chr17 37205313 37205753 -52298800 + LTR2B LTR ERV1 32 490 0 180 0 0 0 chr17 37205753 37205773 -52298780 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1038 200 32 60 chr17 37205777 37206027 -52298526 - AluJo SINE Alu -30 282 40 4093 177 50 18 chr17 37206360 37207494 -52297059 + L1MC/D LINE L1 1817 2982 -3558 1295 174 5 0 chr17 37207508 37207726 -52296827 + AluJo SINE Alu 87 305 -7 2036 208 43 63 chr17 37207777 37208200 -52296353 + L1MC/D LINE L1 3029 3459 -3081 2875 171 18 37 chr17 37208200 37208715 -52295838 + MLT1D LTR MaLR 1 505 0 2036 208 43 63 chr17 37208715 37208729 -52295824 + L1MC/D LINE L1 3459 3472 -3068 2318 106 6 6 chr17 37208729 37209040 -52295513 + AluSx SINE Alu 1 311 -1 2036 208 43 63 chr17 37209040 37209298 -52295255 + L1MC/D LINE L1 3472 3711 -2829 1232 136 22 5 chr17 37209299 37209601 -52294952 + LTR46 LTR ERV1 1 360 -100 43455 35 25 1 chr17 37209603 37215603 -52288950 - L1PA3 LINE L1 -8 6147 1 790 64 36 9 chr17 37215604 37215714 -52288839 + LTR46 LTR ERV1 348 460 0 1402 236 31 45 chr17 37215805 37216067 -52288486 + L1MC/D LINE L1 3873 4128 -2412 1609 178 45 17 chr17 37216067 37216359 -52288194 - AluJb SINE Alu -12 300 1 1402 236 31 45 chr17 37216359 37216519 -52288034 + L1MC/D LINE L1 4128 4289 -2251 * 2235 183 86 43 chr17 37216500 37216855 -52287698 + L1MC/D LINE L1 5446 5784 -1159 1979 129 0 7 chr17 37216855 37217165 -52287388 - AluSq SINE Alu 0 308 1 2235 183 86 43 chr17 37217165 37217535 -52287018 + L1MC/D LINE L1 5784 6200 -743 7446 152 29 75 chr17 37217540 37219082 -52285471 - MER109 Unknown Unknown -211 2221 751 8569 187 251 23 chr17 37219133 37223933 -52280620 + L1PA14 LINE L1 833 7003 -596 2173 120 7 3 chr17 37223933 37224233 -52280320 + AluSx SINE Alu 1 301 -11 8569 187 251 23 chr17 37224233 37224792 -52279761 + L1PA14 LINE L1 7003 7433 -166 8719 164 51 5 chr17 37224793 37227483 -52277070 + L1PB1 LINE L1 1104 4069 -2793 1895 189 77 34 chr17 37227484 37227924 -52276629 - LTR2B LTR ERV1 0 490 32 2013 204 7 9 chr17 37227941 37228372 -52276181 + L1PB1 LINE L1 4065 4494 -2368 2968 207 2 5 chr17 37228373 37228996 -52275557 - L1 LINE L1 -903 5243 4623 7582 174 10 10 chr17 37228997 37229610 -52274943 + L1PB1 LINE L1 4500 5111 -1756 254 95 24 0 chr17 37229610 37229652 -52274901 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7582 174 10 10 chr17 37229652 37231056 -52273497 + L1PB1 LINE L1 5111 6519 -348 531 82 0 0 chr17 37231056 37231129 -52273424 + (TA)n Simple_repeat Simple_repeat 1 73 0 7582 174 10 10 chr17 37231129 37231466 -52273087 + L1PB1 LINE L1 6519 6854 -13 568 256 151 4 chr17 37231562 37231800 -52272753 - L1MEc LINE L1 -4280 2116 1844 212 182 45 0 chr17 37233504 37233548 -52271005 + L2 LINE L2 3150 3195 -77 91 19 0 0 chr17 37233834 37233939 -52270614 + AT_rich Low_complexity Low_complexity 1 105 0 21 71 0 0 chr17 37234112 37234154 -52270399 + AT_rich Low_complexity Low_complexity 1 42 0 752 245 37 84 chr17 37234320 37234618 -52269935 - L1MEc LINE L1 -4547 1849 1566 215 158 0 18 chr17 37235675 37235732 -52268821 + GA-rich Low_complexity Low_complexity 4 59 0 210 175 32 32 chr17 37236123 37236186 -52268367 + (GGGTG)n Simple_repeat Simple_repeat 3 65 0 1189 88 0 6 chr17 37236767 37236926 -52267627 - L1MA2 LINE L1 0 6304 6147 216 0 0 0 chr17 37236932 37236956 -52267597 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 11659 142 29 4 chr17 37236956 37239973 -52264580 - L1MA1 LINE L1 -10 7711 4619 8103 162 38 7 chr17 37239964 37241319 -52263234 - L1MA1 LINE L1 -5981 1584 188 * 276 264 0 0 chr17 37241767 37241835 -52262718 - MIR SINE MIR -120 88 21 1783 174 10 7 chr17 37242467 37242765 -52261788 - AluJb SINE Alu -13 299 1 2250 109 0 0 chr17 37243080 37243374 -52261179 - AluSg SINE Alu -14 296 3 2282 104 0 3 chr17 37243380 37243678 -52260875 - AluSx SINE Alu -14 298 2 2432 109 0 0 chr17 37243712 37244024 -52260529 - AluSx SINE Alu 0 312 1 24 0 0 0 chr17 37244125 37244149 -52260404 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr17 37244698 37244729 -52259824 + AT_rich Low_complexity Low_complexity 1 31 0 2022 130 3 7 chr17 37244836 37245135 -52259418 + AluSx SINE Alu 1 298 -14 614 248 163 35 chr17 37245276 37245534 -52259019 + L3 LINE CR1 1286 1576 -1 1711 168 3 49 chr17 37246208 37246535 -52258018 - AluJo SINE Alu 0 312 1 1264 210 54 41 chr17 37246903 37247198 -52257355 + AluJo SINE Alu 2 300 -2 1894 138 39 0 chr17 37248678 37248960 -52255593 - AluSx SINE Alu -19 293 1 1271 190 0 0 chr17 37249154 37249365 -52255188 + AluSx SINE Alu 29 239 -73 2033 131 0 0 chr17 37249496 37249960 -52254593 + AluSq SINE Alu 1 313 0 2107 114 4 0 chr17 37250392 37250692 -52253861 - AluSx SINE Alu 0 301 1 21 57 0 0 chr17 37251147 37251182 -52253371 + AT_rich Low_complexity Low_complexity 1 35 0 2381 75 3 3 chr17 37251525 37251832 -52252721 + AluSg SINE Alu 1 307 -3 220 328 78 62 chr17 37251970 37252098 -52252455 + L2 LINE L2 3141 3270 -2 1188 119 0 6 chr17 37252936 37253113 -52251440 - AluSg/x SINE Alu -4 308 133 423 0 0 0 chr17 37253113 37253160 -52251393 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2146 85 7 0 chr17 37253163 37253444 -52251109 - AluSx SINE Alu -29 283 1 287 239 186 9 chr17 37253448 37253561 -52250992 - L2 LINE L2 -632 2682 2550 187 309 25 12 chr17 37254238 37254319 -52250234 + L2 LINE L2 3009 3090 -182 361 248 190 7 chr17 37254392 37254529 -52250024 + MIR SINE MIR 91 252 -10 1698 121 0 17 chr17 37254591 37254831 -52249722 - AluSx SINE Alu -75 237 2 349 282 92 25 chr17 37254878 37255041 -52249512 + MIR SINE MIR 16 189 -73 2282 105 0 0 chr17 37255178 37255463 -52249090 - AluSx SINE Alu -27 285 1 395 277 61 7 chr17 37255544 37255692 -52248861 - MIR SINE MIR -55 207 52 429 138 0 0 chr17 37256980 37257045 -52247508 - MLT1D LTR MaLR 0 505 441 2465 66 0 16 chr17 37257046 37257350 -52247203 - AluY SINE Alu -12 299 1 2007 113 31 0 chr17 37257375 37257667 -52246886 - L1PA13 LINE L1 -16 6147 5847 245 257 71 0 chr17 37257698 37257768 -52246785 - MLT1D LTR MaLR -62 443 369 1390 135 0 0 chr17 37257770 37257963 -52246590 + AluSx SINE Alu 1 193 -119 1648 110 0 0 chr17 37258063 37258272 -52246281 - AluSx SINE Alu -103 209 1 229 368 0 8 chr17 37258970 37259087 -52245466 + (TATATG)n Simple_repeat Simple_repeat 1 116 0 515 302 13 0 chr17 37259129 37259288 -52245265 + MIR SINE MIR 88 248 -14 282 244 23 23 chr17 37259380 37259466 -52245087 + L1MEc LINE L1 94 179 -6217 714 263 219 51 chr17 37259467 37259859 -52244694 - MLT1G1 LTR MaLR 0 595 138 928 206 0 0 chr17 37260918 37261078 -52243475 - AluJb SINE Alu -16 296 137 832 190 101 0 chr17 37261278 37261457 -52243096 + AluJo SINE Alu 104 300 -12 1603 161 87 3 chr17 37261769 37262055 -52242498 - AluJb SINE Alu -2 310 1 855 184 6 37 chr17 37262872 37263035 -52241518 - FRAM SINE Alu -8 168 11 2372 80 3 0 chr17 37263045 37263347 -52241206 - AluY SINE Alu -8 303 1 1811 155 13 36 chr17 37263480 37263783 -52240770 + AluJo SINE Alu 2 297 -15 275 320 35 2 chr17 37264040 37264170 -52240383 + MIR SINE MIR 39 181 -27 363 340 56 25 chr17 37264188 37264523 -52240030 + L2 LINE L2 2719 3059 -213 2525 53 6 9 chr17 37264803 37265124 -52239429 + L1PA14 LINE L1 5842 6161 0 227 303 76 53 chr17 37265141 37265273 -52239280 + L2 LINE L2 3138 3272 0 677 313 66 44 chr17 37265667 37266294 -52238259 + L2 LINE L2 2353 3063 -209 388 254 204 0 chr17 37266393 37266535 -52238018 + MIR SINE MIR 42 212 -50 233 220 142 134 chr17 37269935 37270020 -52234533 + L1MEc LINE L1 617 700 -5505 2201 86 48 0 chr17 37270020 37270312 -52234241 + AluSp SINE Alu 1 306 -7 233 220 142 134 chr17 37270312 37270551 -52234002 + L1MEc LINE L1 700 935 -5270 1934 133 34 0 chr17 37270551 37270845 -52233708 + AluSx SINE Alu 1 304 -8 233 220 142 134 chr17 37270845 37271060 -52233493 + L1MEc LINE L1 935 1167 -5038 1658 185 7 14 chr17 37271060 37271341 -52233212 + AluJb SINE Alu 4 282 -30 233 220 142 134 chr17 37271341 37271494 -52233059 + L1MEc LINE L1 1167 1317 -4888 216 122 0 0 chr17 37271685 37271726 -52232827 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 634 182 0 41 chr17 37271731 37271852 -52232701 - AluJo SINE Alu -137 175 60 1770 48 0 14 chr17 37271876 37272083 -52232470 - AluY SINE Alu -18 293 90 298 162 118 15 chr17 37272613 37272681 -52231872 - L2 LINE L2 0 3313 3239 2380 79 3 10 chr17 37275262 37275565 -52228988 + AluSp SINE Alu 1 301 -12 199 283 0 17 chr17 37276354 37276414 -52228139 + L2 LINE L2 3242 3300 -13 2530 58 0 22 chr17 37276620 37276931 -52227622 + AluY SINE Alu 1 304 -7 2394 71 0 26 chr17 37278869 37279180 -52225373 + AluY SINE Alu 1 303 -8 956 61 0 0 chr17 37279495 37279610 -52224943 - AluSq/x SINE Alu -197 115 1 247 206 69 59 chr17 37279777 37279879 -52224674 - MIR SINE MIR -70 192 90 526 250 64 27 chr17 37281098 37281286 -52223267 + MIR SINE MIR 53 247 -15 352 298 30 8 chr17 37281298 37281429 -52223124 + MIR SINE MIR 79 212 -50 259 306 32 16 chr17 37281526 37281650 -52222903 + MIR SINE MIR 81 206 -56 1098 198 0 6 chr17 37281829 37282011 -52222542 - AluJb SINE Alu -25 287 107 291 28 0 0 chr17 37282185 37282221 -52222332 + (CA)n Simple_repeat Simple_repeat 2 37 0 183 129 0 0 chr17 37282221 37282252 -52222301 + (TC)n Simple_repeat Simple_repeat 2 32 0 827 140 67 28 chr17 37282254 37282432 -52222121 - MER53 DNA DNA -1 188 4 515 167 135 0 chr17 37282542 37282638 -52221915 - FLAM_A SINE Alu -30 112 4 1069 153 6 11 chr17 37283011 37283188 -52221365 - AluJb SINE Alu 0 312 137 742 151 0 0 chr17 37283254 37283360 -52221193 + FLAM_C SINE Alu 3 108 -35 567 274 11 21 chr17 37284274 37284464 -52220089 - MIR SINE MIR -1 261 74 2106 132 0 7 chr17 37284474 37284770 -52219783 - AluSx SINE Alu -18 294 1 258 272 136 0 chr17 37284868 37284949 -52219604 + MER5A DNA MER1_type 12 103 -86 200 222 111 16 chr17 37285303 37285366 -52219187 + MIR SINE MIR 82 150 -112 345 284 90 8 chr17 37285793 37285927 -52218626 + MIR SINE MIR 20 164 -98 1042 104 0 0 chr17 37285985 37286120 -52218433 + AluSq/x SINE Alu 1 135 -177 2202 88 3 11 chr17 37286121 37286430 -52218123 + AluSp SINE Alu 1 307 0 201 214 0 0 chr17 37287081 37287123 -52217430 - L2 LINE L2 -2 3270 3229 2563 69 0 0 chr17 37287276 37287580 -52216973 + AluY SINE Alu 1 304 -7 3102 225 63 6 chr17 37287582 37288477 -52216076 + L1M4 LINE L1 2294 3239 -2907 2382 43 36 10 chr17 37288838 37289139 -52215414 + AluY SINE Alu 1 309 -2 2148 110 23 10 chr17 37289150 37289281 -52215272 + AluSx SINE Alu 1 129 -183 2166 91 39 3 chr17 37289281 37289567 -52214986 + AluSg1 SINE Alu 1 296 -13 2148 110 23 10 chr17 37289567 37289736 -52214817 + AluSx SINE Alu 129 305 -7 186 250 42 0 chr17 37289736 37289784 -52214769 - L2 LINE L2 -30 3283 3234 335 145 0 0 chr17 37290080 37290150 -52214403 + AluY SINE Alu 8 52 -249 1460 89 0 5 chr17 37290150 37290341 -52214212 + AluY SINE Alu 109 298 -13 2073 131 7 3 chr17 37290412 37290709 -52213844 + AluSq SINE Alu 1 298 -15 490 156 96 78 chr17 37291264 37291431 -52213122 - Charlie5 DNA MER1_type -27 2585 2416 1402 185 11 41 chr17 37291444 37291714 -52212839 + AluJo SINE Alu 5 266 -46 21 0 0 0 chr17 37291763 37291784 -52212769 + AT_rich Low_complexity Low_complexity 1 21 0 805 166 0 10 chr17 37291785 37291936 -52212617 - MER33 DNA MER1_type -259 65 1 38 0 0 0 chr17 37292294 37292332 -52212221 + AT_rich Low_complexity Low_complexity 1 38 0 2543 69 3 0 chr17 37292340 37292645 -52211908 + AluY SINE Alu 1 306 -5 2325 100 0 3 chr17 37292846 37293146 -52211407 + AluSq SINE Alu 1 299 -14 759 181 0 0 chr17 37293157 37293290 -52211263 + FLAM_A SINE Alu 1 133 0 394 253 192 7 chr17 37293734 37293880 -52210673 - MER5A DNA MER1_type -7 182 10 2536 47 0 17 chr17 37294109 37294410 -52210143 + AluY SINE Alu 1 296 -15 2433 67 13 0 chr17 37294789 37295088 -52209465 + AluY SINE Alu 1 303 -8 2085 150 0 0 chr17 37295866 37296160 -52208393 + AluSx SINE Alu 3 296 -16 219 69 0 0 chr17 37297069 37297098 -52207455 + (TA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr17 37297388 37297416 -52207137 + AT_rich Low_complexity Low_complexity 1 28 0 2221 113 6 0 chr17 37297722 37298033 -52206520 - AluSq SINE Alu 0 313 1 2198 86 14 17 chr17 37299774 37300066 -52204487 - AluSc SINE Alu -18 291 1 1641 165 10 34 chr17 37300155 37300446 -52204107 - AluJo SINE Alu -28 284 1 1812 122 23 8 chr17 37300661 37300924 -52203629 + AluJo SINE Alu 26 292 -20 710 151 0 55 chr17 37301545 37301691 -52202862 - L1PB4 LINE L1 -1 6155 6018 1531 171 13 62 chr17 37301714 37302023 -52202530 + AluJb SINE Alu 1 294 -18 1074 168 53 14 chr17 37302826 37303034 -52201519 - AluJb SINE Alu -95 217 2 1511 219 0 0 chr17 37303034 37303335 -52201218 - AluJo SINE Alu -11 301 1 477 153 10 71 chr17 37303362 37303460 -52201093 - FLAM_A SINE Alu -46 96 5 2089 124 7 0 chr17 37304058 37304365 -52200188 - AluSg SINE Alu 0 310 2 2076 95 3 3 chr17 37304446 37304761 -52199792 - AluSp SINE Alu 0 315 1 1321 164 13 25 chr17 37304920 37305158 -52199395 + MER46A DNA MER2_type 2 236 0 352 390 0 0 chr17 37305870 37306047 -52198506 + (CGG)n Simple_repeat Simple_repeat 2 178 0 281 333 0 0 chr17 37306036 37306210 -52198343 + GA-rich Low_complexity Low_complexity 2 175 0 * 27 73 0 0 chr17 37306549 37306604 -52197949 + AT_rich Low_complexity Low_complexity 1 55 0 1726 171 0 4 chr17 37306610 37306890 -52197663 - AluJo SINE Alu -30 282 4 1593 63 113 0 chr17 37306902 37307124 -52197429 - AluY SINE Alu -64 247 1 842 230 126 4 chr17 37307481 37307711 -52196842 + MIR SINE MIR 3 260 -2 460 243 166 28 chr17 37307727 37307908 -52196645 - MIR SINE MIR -5 257 52 215 197 131 33 chr17 37308718 37308779 -52195774 - MER5A DNA MER1_type -1 188 122 214 254 46 115 chr17 37308773 37308903 -52195650 + MER5A DNA MER1_type 47 167 -22 * 284 318 210 43 chr17 37309288 37309864 -52194689 - L2 LINE L2 -341 2973 2302 721 275 118 17 chr17 37309937 37310224 -52194329 + L2 LINE L2 2092 2407 -907 228 129 0 113 chr17 37310233 37310253 -52194300 - MER5B DNA MER1_type -98 80 59 1931 120 27 3 chr17 37310253 37310545 -52194008 - AluSg SINE Alu -9 301 3 228 129 0 113 chr17 37310545 37310586 -52193967 - MER5B DNA MER1_type -119 59 26 369 271 119 92 chr17 37310598 37310846 -52193707 - L2 LINE L2 -1147 2167 1927 1027 154 109 20 chr17 37310846 37311047 -52193506 - MER20 DNA MER1_type 0 219 1 369 271 119 92 chr17 37311047 37311285 -52193268 - L2 LINE L2 -1387 1927 1668 813 143 22 201 chr17 37311417 37311731 -52192822 - MIR SINE MIR 0 262 5 2340 77 3 3 chr17 37311856 37312166 -52192387 - AluY SINE Alu -1 310 1 342 281 229 15 chr17 37312307 37312717 -52191836 - L2 LINE L2 -2106 1208 711 1867 146 33 0 chr17 37312845 37313146 -52191407 - AluSq SINE Alu -1 312 2 1956 131 10 10 chr17 37313150 37313462 -52191091 - AluSx SINE Alu 0 312 1 211 309 88 60 chr17 37313554 37313771 -52190782 - L2 LINE L2 -2872 442 220 1255 143 72 14 chr17 37314423 37314646 -52189907 - MER46A DNA MER2_type 0 236 1 446 228 91 121 chr17 37314880 37315055 -52189498 - MIR SINE MIR -18 244 76 2475 48 0 0 chr17 37315055 37315349 -52189204 + AluY SINE Alu 1 294 -17 446 228 91 121 chr17 37315349 37315405 -52189148 - MIR SINE MIR -186 76 20 183 208 38 57 chr17 37315868 37315921 -52188632 + MIR3 SINE MIR 9 60 -148 224 242 105 81 chr17 37317480 37317604 -52186949 - MIR SINE MIR -50 212 86 715 283 66 35 chr17 37317925 37318183 -52186370 - L2 LINE L2 -92 3180 2915 242 177 0 97 chr17 37318262 37318324 -52186229 + MER94 DNA DNA 67 122 -12 280 324 182 7 chr17 37318333 37318481 -52186072 - L2 LINE L2 -455 2859 2686 2480 50 0 0 chr17 37318496 37318795 -52185758 + AluY SINE Alu 1 299 -12 2924 239 168 18 chr17 37320146 37321117 -52183436 + L2 LINE L2 486 1602 -1712 2008 82 41 27 chr17 37321133 37321425 -52183128 + AluY SINE Alu 1 296 -15 1484 215 39 66 chr17 37321944 37322213 -52182340 + L2 LINE L2 2884 3138 -175 1755 117 28 74 chr17 37322213 37322538 -52182015 - AluSq SINE Alu -3 310 1 1484 215 39 66 chr17 37322538 37322710 -52181843 + L2 LINE L2 3138 3313 0 320 269 32 0 chr17 37322889 37322982 -52181571 - MIR SINE MIR -38 224 129 521 154 13 0 chr17 37323040 37323118 -52181435 - Tigger5 DNA MER2_type -2244 79 1 369 224 174 10 chr17 37323953 37324051 -52180502 - MIR3 SINE MIR -2 206 93 429 324 79 9 chr17 37324072 37324265 -52180288 + MIR SINE MIR 5 207 -55 296 127 18 0 chr17 37325397 37325452 -52179101 + (CCGAG)n Simple_repeat Simple_repeat 3 58 0 431 240 47 80 chr17 37325884 37326034 -52178519 + MIR SINE MIR 48 192 -70 444 167 204 19 chr17 37326199 37326307 -52178246 - L2 LINE L2 -6 3307 3180 549 159 290 7 chr17 37326634 37326772 -52177781 - MER53 DNA DNA -12 177 1 234 284 95 0 chr17 37326926 37327000 -52177553 - MIR SINE MIR -84 124 44 2008 111 19 38 chr17 37327190 37327334 -52177219 + AluSx SINE Alu 1 146 -166 2086 76 22 51 chr17 37327334 37327649 -52176904 + AluY SINE Alu 1 306 -5 2008 111 19 38 chr17 37327649 37327819 -52176734 + AluSx SINE Alu 146 309 -3 248 222 143 0 chr17 37327865 37327928 -52176625 - L2 LINE L2 0 3313 3242 422 157 0 24 chr17 37327932 37328029 -52176524 + FLAM SINE Alu 44 108 -25 578 188 0 0 chr17 37328029 37328125 -52176428 - MER5A DNA MER1_type -32 157 62 216 0 0 0 chr17 37328130 37328154 -52176399 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1310 146 0 14 chr17 37328156 37328369 -52176184 - AluSx SINE Alu -28 284 75 561 132 0 0 chr17 37378369 37378445 -52126108 - AluSx SINE Alu -235 78 3 432 90 149 0 chr17 37378446 37378513 -52126040 - MER5A DNA MER1_type -112 77 1 418 270 132 20 chr17 37378599 37378803 -52125750 - L2 LINE L2 -192 3080 2854 256 250 53 13 chr17 37379304 37379380 -52125173 + MIR SINE MIR 54 132 -76 225 94 0 0 chr17 37379558 37379590 -52124963 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2183 111 0 0 chr17 37379591 37379871 -52124682 - AluSx SINE Alu -32 280 1 954 103 13 45 chr17 37379979 37380135 -52124418 - L1PA10 LINE L1 0 6168 6018 218 320 47 23 chr17 37380145 37380273 -52124280 + L2 LINE L2 2917 3047 -225 218 275 0 0 chr17 37380395 37380435 -52124118 + L2 LINE L2 3121 3160 -112 805 207 113 43 chr17 37380435 37380735 -52123818 + L1MC4 LINE L1 7719 8039 -3 2555 65 0 3 chr17 37380826 37381136 -52123417 - AluY SINE Alu -2 309 1 628 229 50 22 chr17 37381157 37381336 -52123217 + MIR SINE MIR 79 262 0 1219 126 0 0 chr17 37382109 37382276 -52122277 - AluSg/x SINE Alu -13 299 133 2675 48 0 6 chr17 37382276 37382589 -52121964 - AluY SINE Alu 0 311 1 241 307 27 0 chr17 37383129 37383204 -52121349 - L2 LINE L2 -7 3265 3189 2357 105 0 3 chr17 37383252 37383556 -52120997 - AluSx SINE Alu -9 303 1 2457 78 7 0 chr17 37383558 37383853 -52120700 - AluY SINE Alu -14 297 1 1836 171 10 23 chr17 37384659 37384968 -52119585 - AluJb SINE Alu -7 305 1 2310 99 3 7 chr17 37384973 37385276 -52119277 - AluSq SINE Alu -9 304 3 399 94 0 0 chr17 37385614 37385678 -52118875 - L1MB3 LINE L1 0 6183 6120 242 311 0 22 chr17 37386222 37386312 -52118241 + L2 LINE L2 3226 3313 0 588 243 162 14 chr17 37386395 37386605 -52117948 - MIR SINE MIR 0 262 22 182 313 95 101 chr17 37387216 37387395 -52117158 + L2 LINE L2 3009 3186 -86 1025 174 0 23 chr17 37387595 37387767 -52116786 + AluSg/x SINE Alu 135 302 -8 338 328 109 22 chr17 37387891 37388074 -52116479 + MIR SINE MIR 63 261 -1 2599 68 3 0 chr17 37388369 37388678 -52115875 + AluY SINE Alu 1 310 -1 308 189 200 0 chr17 37389096 37389186 -52115367 - MIR SINE MIR -102 160 53 517 246 108 69 chr17 37389577 37389719 -52114834 + MIR SINE MIR 48 202 -60 2579 52 0 7 chr17 37389719 37390026 -52114527 + AluY SINE Alu 1 305 -6 517 246 108 69 chr17 37390026 37390086 -52114467 + MIR SINE MIR 202 258 -4 286 284 22 17 chr17 37391338 37391446 -52113107 + MIR SINE MIR 54 159 -49 337 211 284 9 chr17 37391499 37391608 -52112945 - MIR SINE MIR -2 260 122 743 277 11 5 chr17 37391655 37391843 -52112710 - MIR3 SINE MIR -7 201 13 1932 107 41 4 chr17 37392047 37392343 -52112210 - AluY SINE Alu 0 306 1 2769 26 0 0 chr17 37392392 37392694 -52111859 + AluY SINE Alu 1 302 -9 397 290 120 26 chr17 37392821 37392986 -52111567 - MIR SINE MIR -60 148 13 2708 39 0 0 chr17 37393029 37393334 -52111219 + AluY SINE Alu 1 305 -6 2312 98 24 0 chr17 37393366 37393663 -52110890 - AluSq SINE Alu -9 304 1 526 297 10 67 chr17 37393922 37394131 -52110422 + MIR SINE MIR 66 262 0 2391 81 0 0 chr17 37394271 37394569 -52109984 - AluY SINE Alu -13 298 1 1660 172 19 45 chr17 37395008 37395170 -52109383 - AluJo SINE Alu -12 300 148 2511 68 0 0 chr17 37395170 37395465 -52109088 - AluY SINE Alu -11 300 6 1660 172 19 45 chr17 37395465 37395610 -52108943 - AluJo SINE Alu -164 148 1 207 305 85 0 chr17 37395802 37395861 -52108692 + MIR SINE MIR 199 262 0 294 273 30 97 chr17 37396057 37396222 -52108331 - L2 LINE L2 -2 3311 3158 230 299 65 26 chr17 37396389 37396466 -52108087 + MIR SINE MIR 5 84 -178 1489 191 55 56 chr17 37396474 37396657 -52107896 - L1MA9 LINE L1 -31 6281 6099 2303 85 10 13 chr17 37396657 37396962 -52107591 + AluSx SINE Alu 1 304 -8 1489 191 55 56 chr17 37396962 37396995 -52107558 - L1MA9 LINE L1 -213 6099 6067 1435 133 94 67 chr17 37396995 37397325 -52107228 + MER44D DNA MER2_type 1 609 0 1489 191 55 56 chr17 37397325 37397532 -52107021 - L1MA9 LINE L1 -245 6067 5858 244 276 17 0 chr17 37397533 37397591 -52106962 + MIR3 SINE MIR 97 155 -53 2080 130 16 0 chr17 37397634 37397941 -52106612 + AluJo SINE Alu 1 312 0 2491 85 0 0 chr17 37397942 37398247 -52106306 + AluSx SINE Alu 1 305 -7 2183 112 0 3 chr17 37398251 37398546 -52106007 + AluSx SINE Alu 7 300 -12 620 174 0 53 chr17 37398556 37398614 -52105939 + 7SK RNA RNA 1 61 -132 3540 108 134 2 chr17 37398614 37399160 -52105393 - LTR35 LTR ERV1 0 618 1 620 174 0 53 chr17 37399160 37399233 -52105320 + 7SK RNA RNA 61 125 -68 3562 165 8 70 chr17 37399246 37399980 -52104573 - LTR8 LTR ERV1 -2 689 1 520 96 0 0 chr17 37400003 37400076 -52104477 + 7SK RNA RNA 121 193 0 22 0 0 0 chr17 37400167 37400189 -52104364 + AT_rich Low_complexity Low_complexity 1 22 0 284 136 34 0 chr17 37401066 37401125 -52103428 + C-rich Low_complexity Low_complexity 3 63 0 807 198 86 0 chr17 37401736 37401898 -52102655 - AluJo SINE Alu -8 304 129 874 181 0 0 chr17 37401939 37402072 -52102481 - AluJo SINE Alu -169 133 1 819 105 0 0 chr17 37402085 37402190 -52102363 - AluSx SINE Alu -14 298 194 1096 107 0 0 chr17 37402191 37402331 -52102222 - AluSx SINE Alu -171 141 2 417 307 59 7 chr17 37402337 37402490 -52102063 + MIR SINE MIR 81 241 -21 574 274 14 11 chr17 37403246 37403404 -52101149 + MIR3 SINE MIR 10 165 -61 1906 156 16 0 chr17 37403745 37404052 -52100501 + AluJo SINE Alu 1 312 0 4132 154 58 94 chr17 37404110 37405059 -52099494 - MER21A LTR ERV1 -7 924 10 251 202 48 60 chr17 37405096 37405180 -52099373 - LTR67 LTR ERVL -47 510 428 2742 19 0 0 chr17 37405261 37405573 -52098980 - AluYb8 SINE Alu -6 312 1 212 243 14 0 chr17 37405867 37405941 -52098612 + (TCCA)n Simple_repeat Simple_repeat 4 78 0 213 281 26 79 chr17 37405950 37406064 -52098489 - L2 LINE L2 -3 3310 3203 255 281 0 0 chr17 37406894 37406958 -52097595 + MIR SINE MIR 89 152 -56 2139 102 0 3 chr17 37407098 37407392 -52097161 + AluSx SINE Alu 1 293 -19 2005 112 0 3 chr17 37407411 37407742 -52096811 - AluSq SINE Alu 0 330 1 618 275 115 45 chr17 37407751 37408011 -52096542 + L1MC4a LINE L1 5531 5828 -1980 2209 60 17 33 chr17 37408011 37408311 -52096242 + AluSc SINE Alu 1 295 -14 618 275 115 45 chr17 37408311 37408432 -52096121 + L1MC4a LINE L1 5828 5939 -1869 228 258 41 21 chr17 37408508 37408605 -52095948 + L1MC4a LINE L1 6053 6151 -1657 463 283 133 40 chr17 37408950 37409176 -52095377 + MIR SINE MIR 4 250 -12 430 304 99 6 chr17 37409742 37409903 -52094650 + MIR SINE MIR 13 188 -74 189 147 0 0 chr17 37411492 37411526 -52093027 + (A)n Simple_repeat Simple_repeat 1 34 0 2324 81 0 0 chr17 37411841 37412139 -52092414 + AluSx SINE Alu 1 298 -14 377 317 139 0 chr17 37412276 37412456 -52092097 + MIR SINE MIR 55 259 -3 462 154 26 103 chr17 37412528 37412582 -52091971 - LTR16C LTR ERVL -2 489 447 2088 121 7 0 chr17 37412582 37412879 -52091674 - AluSx SINE Alu -13 299 1 462 154 26 103 chr17 37412879 37412941 -52091612 - LTR16C LTR ERVL -44 447 382 255 219 68 0 chr17 37413022 37413095 -52091458 + MLT1F LTR MaLR 2 79 -488 297 253 173 0 chr17 37413178 37413253 -52091300 + MLT1F LTR MaLR 187 274 -281 631 232 7 20 chr17 37413279 37413430 -52091123 + MLT1F LTR MaLR 388 536 -6 1617 200 138 29 chr17 37413442 37413945 -52090608 + MER39 LTR ERV1 1 707 0 378 0 0 0 chr17 37413993 37414035 -52090518 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1687 179 3 0 chr17 37414040 37414325 -52090228 - AluJb SINE Alu -26 286 1 958 132 38 71 chr17 37414501 37414713 -52089840 - MER39 LTR ERV1 0 707 503 2044 93 74 63 chr17 37414713 37415080 -52089473 + MER4B LTR ERV1 1 371 -239 743 250 44 5 chr17 37415104 37415361 -52089192 - L1M4c LINE L1 -4736 1646 1274 4581 128 49 14 chr17 37415377 37416110 -52088443 - MER4E LTR ERV1 0 779 21 2359 65 0 0 chr17 37416134 37416428 -52088125 - AluY SINE Alu -17 294 1 990 209 38 0 chr17 37418300 37418511 -52086042 - MIR SINE MIR -31 231 13 909 234 47 0 chr17 37422454 37422668 -52081885 - MIR SINE MIR -25 237 14 2078 128 0 0 chr17 37426962 37427259 -52077294 - AluSx SINE Alu -15 297 1 1742 146 32 111 chr17 37429691 37430069 -52074484 - Tigger3(Golem) DNA MER2_type 0 3029 1 1669 174 16 10 chr17 37430810 37431120 -52073433 - AluJo SINE Alu 0 312 1 377 293 76 19 chr17 37432084 37432241 -52072312 - MIR SINE MIR 0 262 97 2449 56 0 3 chr17 37432284 37432586 -52071967 - AluY SINE Alu -10 301 1 493 196 62 0 chr17 37433399 37433496 -52071057 + AluSg SINE Alu 2 104 -206 1662 116 4 0 chr17 37433496 37433737 -52070816 + AluSx SINE Alu 63 304 -8 1979 123 0 23 chr17 37433739 37434041 -52070512 + AluSx SINE Alu 1 295 -17 1495 188 58 0 chr17 37434297 37434413 -52070140 + AluJo SINE Alu 1 109 -203 192 40 0 0 chr17 37434413 37434438 -52070115 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1495 188 58 0 chr17 37434438 37434614 -52069939 + AluJo SINE Alu 109 310 -2 2207 86 0 26 chr17 37435219 37435499 -52069054 + AluSc SINE Alu 1 274 -35 216 0 0 0 chr17 37435499 37435523 -52069030 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2207 86 0 26 chr17 37435523 37435555 -52068998 + AluSc SINE Alu 274 305 -4 2032 101 10 7 chr17 37436220 37436516 -52068037 + AluSc SINE Alu 3 299 -10 2393 50 3 3 chr17 37436771 37437068 -52067485 - AluY SINE Alu -14 297 1 243 340 38 44 chr17 37437077 37437236 -52067317 + L2 LINE L2 3155 3312 -1 237 83 0 0 chr17 37437481 37437517 -52067036 + (A)n Simple_repeat Simple_repeat 1 36 0 2194 105 3 6 chr17 37437524 37437837 -52066716 + AluSx SINE Alu 1 312 0 212 0 36 0 chr17 37438739 37438767 -52065786 + (ATG)n Simple_repeat Simple_repeat 2 30 0 2270 84 3 0 chr17 37438846 37439142 -52065411 + AluSp SINE Alu 1 297 -16 2163 110 3 0 chr17 37439159 37439458 -52065095 + AluSx SINE Alu 1 300 -12 672 158 63 16 chr17 37439467 37439594 -52064959 + FLAM_A SINE Alu 1 133 0 1092 153 14 65 chr17 37439637 37439797 -52064756 - AluJo SINE Alu -23 289 141 2064 139 0 0 chr17 37439797 37440107 -52064446 - AluSx SINE Alu -2 310 1 1092 153 14 65 chr17 37440107 37440161 -52064392 - AluJo SINE Alu -171 141 86 252 311 47 51 chr17 37440178 37440324 -52064229 + MIR3 SINE MIR 6 160 -48 216 0 0 0 chr17 37441662 37441686 -52062867 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2603 200 38 91 chr17 37441777 37442183 -52062370 - LTR8 LTR ERV1 0 691 338 4560 147 53 4 chr17 37442183 37442940 -52061613 + LTR25 LTR ERV1 1 794 0 2603 200 38 91 chr17 37442940 37443262 -52061291 - LTR8 LTR ERV1 -353 338 1 210 167 0 0 chr17 37443303 37443339 -52061214 - MIR3 SINE MIR -9 199 164 1846 162 3 10 chr17 37443607 37443739 -52060814 + AluSx SINE Alu 1 132 -180 2265 86 0 3 chr17 37443739 37444040 -52060513 + AluSx SINE Alu 1 300 -12 1846 162 3 10 chr17 37444040 37444215 -52060338 + AluSx SINE Alu 132 306 -6 943 95 0 14 chr17 37445767 37445914 -52058639 - AluSg SINE Alu 0 312 168 456 114 13 13 chr17 37445933 37446012 -52058541 + LTR25 LTR ERV1 30 108 -686 1104 115 18 6 chr17 37446012 37446177 -52058376 - AluSg SINE Alu -143 167 1 2204 98 0 3 chr17 37446183 37446480 -52058073 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 37446483 37446504 -52058049 + AT_rich Low_complexity Low_complexity 1 21 0 290 240 92 96 chr17 37446727 37446956 -52057597 + MLT1K LTR MaLR 361 588 0 368 246 154 15 chr17 37447745 37447875 -52056678 + MIR SINE MIR 109 256 -6 295 250 60 60 chr17 37448507 37448607 -52055946 - L2 LINE L2 -19 3294 3195 2396 58 3 0 chr17 37448704 37448998 -52055555 + AluY SINE Alu 2 296 -15 1239 248 124 3 chr17 37449103 37449442 -52055111 + L2 LINE L2 2930 3309 -4 330 200 70 26 chr17 37449893 37450008 -52054545 - L1MC5 LINE L1 -25 7936 7817 933 114 0 8 chr17 37450031 37450163 -52054390 - FLAM_C SINE Alu -2 131 1 216 97 0 0 chr17 37450454 37450485 -52054068 + (TG)n Simple_repeat Simple_repeat 2 32 0 624 213 147 0 chr17 37450487 37450637 -52053916 + MIR SINE MIR 20 191 -71 961 213 46 14 chr17 37450639 37450855 -52053698 + L1MC4 LINE L1 6767 6989 -1053 5159 157 37 2 chr17 37450864 37451929 -52052624 - L1MB7 LINE L1 -9 6175 5077 1928 238 53 26 chr17 37451930 37452547 -52052006 + L1MC4 LINE L1 6962 7595 -447 758 138 24 16 chr17 37452547 37452670 -52051883 + FLAM_C SINE Alu 2 125 -18 5057 115 32 7 chr17 37452866 37453625 -52050928 + LTR19C LTR ERV1 1 778 -1 345 164 0 15 chr17 37453708 37453775 -52050778 + MER53 DNA DNA 1 66 -123 341 242 68 75 chr17 37454488 37454649 -52049904 + MLT1K LTR MaLR 417 576 -12 788 201 30 6 chr17 37455428 37455592 -52048961 - Zaphod DNA AcHobo -25 4006 3839 1735 91 95 15 chr17 37455592 37455866 -52048687 - AluSx SINE Alu -16 296 1 1317 194 46 3 chr17 37455888 37456172 -52048381 - Zaphod DNA AcHobo -110 3921 3626 761 164 164 31 chr17 37456184 37456538 -52048015 - Zaphod DNA AcHobo -3048 983 583 637 129 0 0 chr17 37456549 37456634 -52047919 + MER75 DNA T2_type 1 85 -429 1021 94 0 0 chr17 37456635 37456773 -52047780 + L1MA2 LINE L1 6167 6304 0 788 190 31 67 chr17 37456782 37456945 -52047608 + L1ME2 LINE L1 5813 5946 -296 2104 127 0 0 chr17 37456945 37457253 -52047300 + AluSx SINE Alu 1 308 -4 788 190 31 67 chr17 37457253 37457393 -52047160 + L1ME2 LINE L1 5946 6090 -152 544 245 33 7 chr17 37457339 37457490 -52047063 + L1MA10 LINE L1 6177 6331 -3 * 2326 66 7 0 chr17 37457869 37458170 -52046383 - AluSp SINE Alu -9 304 2 1997 126 3 3 chr17 37458292 37458594 -52045959 + AluSq SINE Alu 1 302 -11 2160 117 3 0 chr17 37458849 37459158 -52045395 + AluSx SINE Alu 3 312 0 2263 53 4 0 chr17 37459283 37459587 -52044966 + AluY SINE Alu 1 305 0 1682 130 65 3 chr17 37459617 37459909 -52044644 + AluJo SINE Alu 3 312 0 358 238 90 25 chr17 37459959 37460081 -52044472 - MIR SINE MIR -85 177 48 294 323 110 24 chr17 37460904 37461031 -52043522 - MIR3 SINE MIR -59 149 12 598 211 60 25 chr17 37461109 37461308 -52043245 - L1MC5 LINE L1 -303 7658 7453 2202 58 3 48 chr17 37461801 37462110 -52042443 + AluY SINE Alu 1 295 -16 7918 137 41 41 chr17 37462181 37462475 -52042078 - L1P3 LINE L1 -4015 2446 2153 1932 117 59 0 chr17 37462475 37462765 -52041788 - AluSx SINE Alu -5 307 1 7918 137 41 41 chr17 37462765 37463629 -52040924 - L1P3 LINE L1 -4308 2153 1263 186 71 0 0 chr17 37463629 37463657 -52040896 + (TTG)n Simple_repeat Simple_repeat 1 28 0 7918 137 41 41 chr17 37463657 37464456 -52040097 - L1P3 LINE L1 -5198 1263 465 6228 116 16 27 chr17 37464456 37464841 -52039712 - Tigger1 DNA MER2_type -506 1912 1524 2204 89 0 29 chr17 37464841 37465157 -52039396 + AluY SINE Alu 1 307 -4 6228 116 16 27 chr17 37465157 37465732 -52038821 - Tigger1 DNA MER2_type -894 1524 963 207 69 0 0 chr17 37465960 37465989 -52038564 + (CA)n Simple_repeat Simple_repeat 2 30 0 3618 132 16 33 chr17 37466030 37466159 -52038394 - L1PA15 LINE L1 -2 6163 6033 2090 124 0 9 chr17 37466159 37466474 -52038079 - AluSx SINE Alu 0 312 1 3618 132 16 33 chr17 37466474 37466952 -52037601 - L1PA15 LINE L1 -132 6033 5566 2932 145 29 6 chr17 37466969 37467624 -52036929 - L1M2 LINE L1 -523 5768 5101 1247 159 0 44 chr17 37467708 37467935 -52036618 - AluJo SINE Alu -12 300 84 638 277 85 37 chr17 37467941 37468342 -52036211 - L1M4 LINE L1 -991 5155 4736 934 286 124 32 chr17 37468785 37469222 -52035331 - L2 LINE L2 -1 3312 2836 697 187 18 164 chr17 37469228 37469453 -52035100 + MER20 DNA MER1_type 2 193 -26 314 175 250 0 chr17 37469631 37469711 -52034842 - L2 LINE L2 -36 3236 3137 837 229 24 0 chr17 37470494 37470660 -52033893 + MIR SINE MIR 2 171 -91 427 267 80 27 chr17 37470667 37470817 -52033736 + MIR SINE MIR 48 205 -57 1521 254 85 16 chr17 37470916 37470942 -52033611 + HAL1 LINE L1 1182 1205 -1302 1559 133 4 0 chr17 37470942 37471175 -52033378 - AluSq SINE Alu -79 234 1 1521 254 85 16 chr17 37471175 37471360 -52033193 + HAL1 LINE L1 1205 1376 -1131 2453 44 0 19 chr17 37471360 37471677 -52032876 + AluY SINE Alu 1 311 0 1521 254 85 16 chr17 37471677 37472026 -52032527 + HAL1 LINE L1 1376 1782 -725 1222 94 64 44 chr17 37472111 37472314 -52032239 + AluSc SINE Alu 101 307 -2 866 239 159 25 chr17 37472348 37472871 -52031682 + HAL1 LINE L1 1912 2504 -3 1810 117 0 68 chr17 37473003 37473150 -52031403 + AluSx SINE Alu 1 118 -194 2306 63 0 10 chr17 37473150 37473451 -52031102 + AluY SINE Alu 1 298 -13 1810 117 0 68 chr17 37473451 37473610 -52030943 + AluSx SINE Alu 118 286 -26 221 318 129 0 chr17 37473620 37473705 -52030848 + MIR3 SINE MIR 107 202 -6 2811 170 16 33 chr17 37474065 37474642 -52029911 + L1MB8 LINE L1 5611 6177 -1 2367 72 0 22 chr17 37475121 37475439 -52029114 + AluY SINE Alu 1 311 0 1963 141 7 0 chr17 37476999 37477305 -52027248 - AluSg SINE Alu -2 308 1 21 36 0 0 chr17 37477305 37477333 -52027220 + AT_rich Low_complexity Low_complexity 1 28 0 765 227 49 16 chr17 37477463 37477648 -52026905 - MER58C DNA MER1_type -10 205 15 276 263 0 50 chr17 37477830 37477910 -52026643 - MIR3 SINE MIR -3 205 130 2401 55 0 0 chr17 37477920 37478211 -52026342 + AluY SINE Alu 1 291 -20 1691 136 0 144 chr17 37478444 37478739 -52025814 - AluSx SINE Alu 0 381 155 2242 91 0 16 chr17 37478739 37479046 -52025507 - AluSc SINE Alu -7 302 1 1691 136 0 144 chr17 37479046 37479182 -52025371 - AluSx SINE Alu -226 155 1 228 324 46 68 chr17 37479204 37479423 -52025130 - L1ME LINE L1 -5852 218 5 1775 104 0 41 chr17 37479459 37479727 -52024826 - AluSx SINE Alu -19 293 37 649 223 43 0 chr17 37480381 37480520 -52024033 + MER105 DNA DNA 44 188 -16 407 141 244 0 chr17 37480557 37480635 -52023918 - AluSp/q SINE Alu -1 302 206 2154 102 3 10 chr17 37480913 37481217 -52023336 - AluSp SINE Alu -11 302 1 251 303 0 0 chr17 37481478 37481544 -52023009 - MIR SINE MIR -27 235 170 2125 108 3 0 chr17 37481570 37481866 -52022687 - AluSx SINE Alu -15 297 1 315 154 167 26 chr17 37482218 37482296 -52022257 - MIR SINE MIR -82 180 92 293 308 11 0 chr17 37482548 37482639 -52021914 + MIR SINE MIR 53 144 -64 625 222 169 5 chr17 37482707 37482896 -52021657 - MIR SINE MIR -16 246 27 1086 144 0 44 chr17 37482912 37483093 -52021460 - FAM SINE Alu -2 173 1 189 0 0 0 chr17 37483802 37483823 -52020730 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2149 161 38 17 chr17 37484386 37484803 -52019750 + L1MB3 LINE L1 5739 6164 -19 348 235 0 0 chr17 37484803 37484871 -52019682 - L1MC4 LINE L1 -1339 6703 6636 1473 177 0 62 chr17 37484874 37485179 -52019374 - AluJb SINE Alu -26 286 1 270 0 0 0 chr17 37485192 37485222 -52019331 + (CA)n Simple_repeat Simple_repeat 2 31 0 1585 132 45 42 chr17 37485223 37485511 -52019042 - AluJb SINE Alu -23 289 1 1915 116 20 14 chr17 37485621 37485913 -52018640 - AluSx SINE Alu -18 294 1 2445 36 3 7 chr17 37486199 37486504 -52018049 - AluY SINE Alu -7 304 1 186 227 0 0 chr17 37487025 37487069 -52017484 + CT-rich Low_complexity Low_complexity 1 44 0 1899 126 0 49 chr17 37487434 37487759 -52016794 + AluJb SINE Alu 1 309 -3 226 289 48 12 chr17 37488364 37488447 -52016106 - MIR SINE MIR -175 87 2 402 333 47 85 chr17 37488959 37489250 -52015303 - L2 LINE L2 -14 3258 2990 2212 82 24 0 chr17 37489250 37489542 -52015011 + AluSx SINE Alu 1 299 -13 402 333 47 85 chr17 37489542 37489722 -52014831 - L2 LINE L2 -282 2990 2805 715 269 34 34 chr17 37489851 37490085 -52014468 + MIR SINE MIR 29 262 0 2231 95 7 0 chr17 37490640 37490944 -52013609 + AluSq SINE Alu 1 306 -7 180 77 0 0 chr17 37490947 37490973 -52013580 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 333 281 193 6 chr17 37492062 37492233 -52012320 - MIR SINE MIR -55 207 5 629 289 138 26 chr17 37492754 37493059 -52011494 - L2 LINE L2 -2974 340 2 687 163 0 0 chr17 37493302 37493449 -52011104 + CT-rich Low_complexity Low_complexity 2 148 0 207 0 0 0 chr17 37493468 37493491 -52011062 + (TCCA)n Simple_repeat Simple_repeat 4 26 0 237 289 13 40 chr17 37493491 37493567 -52010986 - L2 LINE L2 -21 3251 3178 211 293 132 0 chr17 37495407 37495513 -52009040 + MIR3 SINE MIR 37 156 -52 458 296 251 15 chr17 37497655 37497854 -52006699 - MIR SINE MIR -12 250 5 378 261 255 0 chr17 37498025 37498178 -52006375 + MER117 DNA MER1_type 1 192 -5 235 277 89 27 chr17 37498199 37498311 -52006242 - MIR SINE MIR -68 140 22 968 254 122 32 chr17 37498819 37499229 -52005324 - MLT1J2 LTR MaLR -3 447 1 21 0 0 0 chr17 37499426 37499447 -52005106 + AT_rich Low_complexity Low_complexity 1 21 0 452 266 0 0 chr17 37499497 37499610 -52004943 - HAL1 LINE L1 -821 1686 1574 1609 244 6 72 chr17 37499682 37499988 -52004565 - L1MC4 LINE L1 -1120 6922 6662 1851 139 23 0 chr17 37499988 37500290 -52004263 - AluSx SINE Alu -3 309 1 1609 244 6 72 chr17 37500290 37500496 -52004057 - L1MC4 LINE L1 -1380 6662 6444 1863 95 95 0 chr17 37500708 37500981 -52003572 - AluSq SINE Alu -14 299 1 1897 139 0 26 chr17 37501047 37501356 -52003197 - AluJb SINE Alu -11 301 1 810 186 13 6 chr17 37501654 37501810 -52002743 + MER5A DNA MER1_type 32 188 -1 2285 98 0 0 chr17 37502055 37502362 -52002191 - AluSx SINE Alu -5 307 1 294 258 54 32 chr17 37502395 37502488 -52002065 + L2 LINE L2 3219 3313 0 265 302 112 22 chr17 37502514 37502693 -52001860 - L2 LINE L2 -190 3082 2888 2020 123 0 0 chr17 37502816 37503109 -52001444 + AluSx SINE Alu 11 303 -9 1664 147 10 23 chr17 37503506 37503806 -52000747 + AluJb SINE Alu 2 297 -15 2226 130 0 0 chr17 37503978 37504286 -52000267 + AluSx SINE Alu 1 308 -4 5762 105 29 12 chr17 37504701 37504862 -51999691 + L1PA16 LINE L1 4234 4391 -1775 234 0 0 0 chr17 37504862 37504888 -51999665 + (CA)n Simple_repeat Simple_repeat 1 26 0 5762 105 29 12 chr17 37504888 37506625 -51997928 + L1PA16 LINE L1 4391 6166 0 433 286 55 29 chr17 37506632 37506870 -51997683 + HAL1 LINE L1 1424 1667 -840 325 223 107 18 chr17 37506877 37506989 -51997564 - LTR67 LTR ERVL -2 555 434 1509 138 9 0 chr17 37506993 37507211 -51997342 + AluSq SINE Alu 1 220 -93 261 0 0 0 chr17 37507562 37507591 -51996962 + (TTA)n Simple_repeat Simple_repeat 2 30 0 269 188 35 47 chr17 37507964 37508049 -51996504 + HAL1b LINE L1 1029 1112 -236 697 269 71 18 chr17 37509666 37509861 -51994692 + MER46C DNA MER2_type 42 258 -80 1861 151 10 10 chr17 37509861 37510160 -51994393 - AluJo SINE Alu -12 300 2 697 269 71 18 chr17 37510160 37510246 -51994307 + MER46C DNA MER2_type 258 338 0 2608 53 0 0 chr17 37510269 37510569 -51993984 + AluY SINE Alu 1 300 -11 2207 108 3 7 chr17 37510579 37510885 -51993668 + AluSx SINE Alu 1 305 -7 1685 216 54 62 chr17 37510886 37511386 -51993167 + MER74B LTR ERVL 111 606 -16 2466 143 30 2 chr17 37512335 37512941 -51991612 - MER50 LTR ERV1 -23 711 7 1900 104 8 8 chr17 37512953 37513213 -51991340 - AluSq SINE Alu -16 297 38 252 0 0 0 chr17 37513909 37513937 -51990616 + (TG)n Simple_repeat Simple_repeat 1 28 0 1474 156 100 7 chr17 37513956 37514226 -51990327 + AluJo SINE Alu 1 295 -17 282 170 0 0 chr17 37514231 37514278 -51990275 - L1MB1 LINE L1 -18 6150 6104 3199 145 78 22 chr17 37514356 37514942 -51989611 - LTR8A LTR ERV1 -108 619 1 2403 149 29 0 chr17 37515046 37515429 -51989124 - MER57A LTR ERV1 -9 394 1 1025 152 11 17 chr17 37515536 37515714 -51988839 - FRAM SINE Alu -2 174 1 22 88 0 0 chr17 37516054 37516111 -51988442 + AT_rich Low_complexity Low_complexity 1 57 0 3721 165 32 41 chr17 37516172 37516745 -51987808 + MER50 LTR ERV1 1 568 -166 2032 128 28 0 chr17 37516745 37517027 -51987526 - AluSx SINE Alu -22 290 1 3721 165 32 41 chr17 37517027 37517192 -51987361 + MER50 LTR ERV1 568 733 -1 1175 189 55 108 chr17 37517211 37517235 -51987318 + LTR37B LTR ERV1 21 45 -423 2449 90 0 0 chr17 37517235 37517536 -51987017 + AluSg SINE Alu 3 303 -7 1175 189 55 108 chr17 37517536 37517982 -51986571 + LTR37B LTR ERV1 45 466 -2 228 204 0 56 chr17 37518045 37518062 -51986491 + AluSc SINE Alu 117 133 -166 828 168 0 0 chr17 37518062 37518193 -51986360 + FLAM_C SINE Alu 1 131 -2 228 204 0 56 chr17 37518193 37518229 -51986324 + AluSc SINE Alu 133 167 -132 2736 163 98 141 chr17 37518230 37519093 -51985460 + LTR1B LTR ERV1 1 826 0 15606 164 39 16 chr17 37519094 37521832 -51982721 + HUERS-P2 LTR ERV1 2 2801 -287 2545 144 29 10 chr17 37521832 37522248 -51982305 + HUERS-P2 LTR ERV1 2665 3088 0 2442 171 125 63 chr17 37522248 37522990 -51981563 + LTR1B LTR ERV1 1 779 -6 524 261 55 20 chr17 37522990 37523317 -51981236 + LTR46 LTR ERV1 1 430 -30 649 172 55 0 chr17 37523331 37523459 -51981094 + AluJb SINE Alu 157 291 -21 531 297 81 5 chr17 37525093 37525302 -51979251 + MER46C DNA MER2_type 4 228 -110 2525 164 36 95 chr17 37525341 37525943 -51978610 - L1MB3 LINE L1 -1 6182 5616 430 214 0 0 chr17 37525944 37526028 -51978525 + MER46C DNA MER2_type 255 338 0 2268 96 0 23 chr17 37526154 37526457 -51978096 + AluSx SINE Alu 1 296 -16 56 71 0 0 chr17 37526457 37526569 -51977984 + AT_rich Low_complexity Low_complexity 1 112 0 3674 83 14 2 chr17 37526569 37527060 -51977493 - L1PA8 LINE L1 -9 6163 5667 21 0 0 0 chr17 37527075 37527096 -51977457 + AT_rich Low_complexity Low_complexity 1 21 0 274 181 60 15 chr17 37527100 37527233 -51977320 + (TATAA)n Simple_repeat Simple_repeat 3 141 0 393 262 29 0 chr17 37527483 37527586 -51976967 + MIR SINE MIR 52 157 -105 351 237 0 43 chr17 37527657 37527750 -51976803 + MIR SINE MIR 153 241 -21 427 245 0 9 chr17 37528950 37529056 -51975497 + L2 LINE L2 2453 2557 -757 2034 226 75 47 chr17 37529100 37529697 -51974856 - MER21B LTR ERV1 -152 711 98 22049 106 15 29 chr17 37530045 37534208 -51970345 - L1P3 LINE L1 -2068 4393 191 830 216 47 28 chr17 37534217 37534430 -51970123 - LTR3 LTR ERVK -5 427 211 1393 102 0 0 chr17 37534430 37534616 -51969937 - L1P3 LINE L1 -6268 193 8 458 225 28 94 chr17 37535229 37535471 -51969082 + MLT1H LTR MaLR 241 547 -2 1630 174 10 24 chr17 37535578 37535871 -51968682 - AluJb SINE Alu -23 289 1 435 299 16 57 chr17 37536210 37536404 -51968149 - MIR SINE MIR -30 232 47 629 70 0 60 chr17 37536522 37536622 -51967931 - L1MD1 LINE L1 0 6242 6149 2403 134 8 138 chr17 37536622 37536724 -51967829 + MER65C LTR ERV1 2 116 -345 2349 97 7 0 chr17 37536724 37537032 -51967521 + AluSg SINE Alu 1 310 0 2403 134 8 138 chr17 37537032 37537458 -51967095 + MER65C LTR ERV1 116 461 0 3134 152 11 9 chr17 37537458 37537983 -51966570 - L1MD1 LINE L1 -89 6153 5628 516 218 177 14 chr17 37538896 37539043 -51965510 + MER45A DNA AcHobo 1 171 -7 987 201 4 46 chr17 37539652 37539891 -51964662 - MER96B DNA MER1_type? -3 414 186 919 130 0 32 chr17 37539911 37540096 -51964457 + (TCCA)n Simple_repeat Simple_repeat 2 180 0 402 326 210 12 chr17 37540097 37540425 -51964128 - L2 LINE L2 -1 3312 2920 3162 134 18 21 chr17 37540852 37541365 -51963188 + LTR10D LTR ERV1 1 511 -2 605 299 104 0 chr17 37541942 37542173 -51962380 + L2 LINE L2 2499 2753 -561 556 275 121 54 chr17 37542209 37542580 -51961973 + L2 LINE L2 2873 3268 -45 2588 169 65 27 chr17 37544433 37544953 -51959600 + MER34 LTR ERV1 1 540 -2 180 345 92 23 chr17 37544960 37545134 -51959419 - MIR SINE MIR -49 213 28 267 254 111 24 chr17 37545158 37545284 -51959269 + MIR SINE MIR 74 210 -52 666 269 5 30 chr17 37545293 37545490 -51959063 - MIR SINE MIR -4 258 67 1984 159 0 7 chr17 37545644 37545952 -51958601 - AluJb SINE Alu -4 308 3 505 209 0 115 chr17 37546162 37546344 -51958209 - L1MD3 LINE L1 -10 7985 7825 2246 111 0 0 chr17 37546353 37546641 -51957912 - AluSx SINE Alu -24 288 1 304 231 0 0 chr17 37547008 37547060 -51957493 + Tigger3(Golem) DNA MER2_type 2 53 -2976 * 688 174 43 0 chr17 37547053 37547168 -51957385 - Tigger3(Golem) DNA MER2_type -6 3023 2904 1730 130 52 0 chr17 37547218 37547488 -51957065 + MER7A DNA MER2_type 65 346 0 209 286 99 22 chr17 37547598 37547689 -51956864 - L3 LINE CR1 -1196 381 284 2589 56 0 3 chr17 37547714 37548018 -51956535 + AluY SINE Alu 1 303 -8 209 260 164 0 chr17 37548408 37548481 -51956072 - L2 LINE L2 0 3313 3229 2454 71 3 0 chr17 37549006 37549300 -51955253 - AluSp SINE Alu -18 295 1 2263 108 3 7 chr17 37549303 37549608 -51954945 - AluSq SINE Alu -9 304 1 648 119 45 0 chr17 37549620 37549846 -51954707 + (TA)n Simple_repeat Simple_repeat 1 236 0 1817 155 3 10 chr17 37550068 37550359 -51954194 - AluJb SINE Alu -23 289 1 798 277 113 27 chr17 37550359 37550767 -51953786 - L1ME3A LINE L1 -231 5939 5497 249 197 0 0 chr17 37550830 37550891 -51953662 + GA-rich Low_complexity Low_complexity 4 64 0 411 21 0 0 chr17 37551499 37551547 -51953006 + (ATG)n Simple_repeat Simple_repeat 2 49 0 2443 35 11 7 chr17 37551554 37551839 -51952714 - AluY SINE Alu -25 286 1 3247 222 74 32 chr17 37552200 37553109 -51951444 - L1MCc LINE L1 -2907 4034 3071 2486 90 0 0 chr17 37553109 37553420 -51951133 - AluY SINE Alu 0 311 1 3247 222 74 32 chr17 37553420 37553595 -51950958 - L1MCc LINE L1 -3870 3071 2905 1130 254 4 34 chr17 37553636 37553984 -51950569 - L1ME2 LINE L1 -9 6155 5815 28 0 0 0 chr17 37554180 37554208 -51950345 + AT_rich Low_complexity Low_complexity 1 28 0 974 284 102 44 chr17 37554209 37554376 -51950177 - L1MCc LINE L1 -4555 2567 2411 1645 189 31 3 chr17 37554376 37554667 -51949886 - AluJo SINE Alu -13 299 1 974 284 102 44 chr17 37554667 37555607 -51948946 - L1MCc LINE L1 -4711 2411 1171 357 307 6 42 chr17 37556171 37556337 -51948216 - L1MCc LINE L1 -5971 452 293 369 0 0 0 chr17 37556418 37556459 -51948094 + (TG)n Simple_repeat Simple_repeat 2 42 0 1626 190 34 39 chr17 37556482 37556805 -51947748 - L1ME1 LINE L1 -5 6161 5839 2860 159 5 2 chr17 37556805 37557232 -51947321 - MSTA LTR MaLR 0 428 1 1626 190 34 39 chr17 37557232 37557293 -51947260 - L1ME1 LINE L1 -327 5839 5779 416 357 76 62 chr17 37557354 37557842 -51946711 + L1M2 LINE L1 13 507 -6342 317 301 39 32 chr17 37558032 37558188 -51946365 + L1P4 LINE L1 767 923 -5927 1387 261 71 25 chr17 37558394 37559288 -51945265 + L1P4 LINE L1 1018 2051 -4798 14572 189 31 20 chr17 37559389 37560271 -51944282 + L1P4 LINE L1 2620 3491 -3378 2163 59 17 35 chr17 37560271 37560598 -51943955 + AluY SINE Alu 1 322 0 14572 189 31 20 chr17 37560598 37563401 -51941152 + L1P4 LINE L1 3491 6337 -532 2294 208 30 30 chr17 37563506 37563821 -51940732 + L1 LINE L1 4457 4774 -1372 2406 95 0 0 chr17 37563821 37564127 -51940426 + AluSp SINE Alu 2 307 -6 2294 208 30 30 chr17 37564127 37564374 -51940179 + L1 LINE L1 4773 5019 -1127 2900 3 0 0 chr17 37564386 37564695 -51939858 + AluYa5 SINE Alu 1 309 -2 2163 99 0 3 chr17 37564707 37565022 -51939531 + AluY SINE Alu 1 314 0 2249 102 7 0 chr17 37565275 37565578 -51938975 + AluSg SINE Alu 1 305 -5 185 289 116 66 chr17 37565898 37566019 -51938534 + L2 LINE L2 2944 3070 -202 181 333 50 0 chr17 37566070 37566130 -51938423 - L2 LINE L2 -5 3267 3205 434 349 74 0 chr17 37566207 37566356 -51938197 + L2 LINE L2 3113 3272 0 2478 84 28 4 chr17 37566691 37567124 -51937429 + L1PA8 LINE L1 5156 5593 -561 4843 47 2 10 chr17 37567396 37567975 -51936578 + L1PA8 LINE L1 5598 6171 -1 2076 129 3 3 chr17 37568108 37568419 -51936134 + AluY SINE Alu 1 311 0 252 0 0 0 chr17 37569006 37569034 -51935519 + (T)n Simple_repeat Simple_repeat 1 28 0 246 154 0 0 chr17 37569135 37569174 -51935379 - Alu SINE Alu -261 39 1 2059 114 7 17 chr17 37569437 37569599 -51934954 - AluSx SINE Alu -16 296 137 2194 110 0 3 chr17 37569599 37569890 -51934663 - AluSc SINE Alu -19 290 1 2059 114 7 17 chr17 37569890 37570026 -51934527 - AluSx SINE Alu -175 137 1 2881 10 0 0 chr17 37570046 37570357 -51934196 - AluYb8 SINE Alu -7 311 1 186 43 0 0 chr17 37570378 37570401 -51934152 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 420 315 11 88 chr17 37570621 37570881 -51933672 - L2 LINE L2 -196 3076 2837 2097 107 0 4 chr17 37570917 37571230 -51933323 - AluSc SINE Alu 0 312 1 456 149 27 0 chr17 37571362 37571436 -51933117 + MER44D DNA MER2_type 11 356 -253 2971 151 45 36 chr17 37571443 37571839 -51932714 - MER7C DNA MER2_type -2427 601 197 1764 155 87 31 chr17 37571839 37572194 -51932359 + THE1C LTR MaLR 1 375 0 2971 151 45 36 chr17 37572194 37572354 -51932199 - MER7C DNA MER2_type -2831 197 40 1239 145 61 0 chr17 37572371 37572423 -51932130 + MER44D DNA MER2_type 364 411 -2076 1697 148 23 30 chr17 37572423 37572728 -51931825 - AluSx SINE Alu -9 303 1 1239 145 61 0 chr17 37572728 37572903 -51931650 + MER44D DNA MER2_type 411 605 0 415 298 132 67 chr17 37572903 37573206 -51931347 - L2 LINE L2 -680 2634 2352 1918 138 21 3 chr17 37573206 37573496 -51931057 + AluSx SINE Alu 6 300 -12 415 298 132 67 chr17 37573496 37573656 -51930897 - L2 LINE L2 -962 2352 2204 2320 88 3 0 chr17 37573656 37573951 -51930602 + AluY SINE Alu 1 296 -15 415 298 132 67 chr17 37573951 37574070 -51930483 - L2 LINE L2 -1110 2204 2013 1805 199 88 20 chr17 37574080 37574478 -51930075 - MSTB LTR MaLR -1 425 1 2384 73 0 10 chr17 37574491 37574791 -51929762 - AluSc SINE Alu -11 298 2 798 187 0 14 chr17 37574803 37574942 -51929611 - FLAM_C SINE Alu -5 138 2 241 198 9 45 chr17 37575025 37575136 -51929417 + (TATG)n Simple_repeat Simple_repeat 2 108 0 189 171 0 0 chr17 37575141 37575176 -51929377 + (CA)n Simple_repeat Simple_repeat 2 36 0 1789 164 3 22 chr17 37575176 37575493 -51929060 - AluJb SINE Alu -1 311 1 2351 89 3 0 chr17 37576031 37576334 -51928219 - AluSp SINE Alu -9 304 1 1826 147 14 7 chr17 37576881 37577173 -51927380 + AluSx SINE Alu 1 294 -18 1581 158 9 80 chr17 37577391 37577727 -51926826 + AluJb SINE Alu 1 312 0 1911 143 16 13 chr17 37578339 37578647 -51925906 - AluSx SINE Alu -2 310 2 551 255 140 36 chr17 37578747 37579076 -51925477 - L1MC/D LINE L1 -2109 5699 5337 1308 168 191 0 chr17 37579096 37579352 -51925201 - AluSx SINE Alu -7 305 1 841 209 6 18 chr17 37579599 37579762 -51924791 - FRAM SINE Alu -14 162 2 2529 47 7 3 chr17 37580007 37580306 -51924247 + AluY SINE Alu 1 300 -11 216 186 47 0 chr17 37580480 37580523 -51924030 + T-rich Low_complexity Low_complexity 5 49 0 192 125 0 0 chr17 37580525 37580557 -51923996 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 1661 164 23 39 chr17 37580559 37580869 -51923684 - AluJo SINE Alu -7 305 1 700 262 40 87 chr17 37580884 37580969 -51923584 - L1MEd LINE L1 -2712 3417 3330 1954 131 3 3 chr17 37580969 37581271 -51923282 - AluSx SINE Alu 0 302 1 700 262 40 87 chr17 37581271 37581352 -51923201 - L1MEd LINE L1 -2799 3330 3247 2151 74 0 104 chr17 37581352 37581553 -51923000 - AluSq SINE Alu -10 303 149 2404 66 0 0 chr17 37581553 37581854 -51922699 - AluY SINE Alu -10 301 1 2151 74 0 104 chr17 37581854 37581990 -51922563 - AluSq SINE Alu -164 149 1 700 262 40 87 chr17 37581990 37582317 -51922236 - L1MEd LINE L1 -2882 3247 2945 1535 145 0 24 chr17 37582319 37582574 -51921979 - AluJb SINE Alu 0 312 64 295 268 24 0 chr17 37582605 37582687 -51921866 - L1MEd LINE L1 -3166 2963 2880 21 36 0 0 chr17 37582846 37582874 -51921679 + AT_rich Low_complexity Low_complexity 1 28 0 327 281 93 87 chr17 37582913 37582999 -51921554 - L1MEd LINE L1 -4300 2010 1926 2102 138 0 0 chr17 37582999 37583297 -51921256 - AluSx SINE Alu -14 298 1 327 281 93 87 chr17 37583297 37583576 -51920977 - L1MEd LINE L1 -4384 1926 1643 443 303 119 31 chr17 37583676 37584049 -51920504 - L1MEd LINE L1 -4874 1245 906 1653 171 39 7 chr17 37584049 37584335 -51920218 - AluJo SINE Alu -17 295 1 443 303 119 31 chr17 37584335 37584593 -51919960 - L1MEd LINE L1 -5213 906 658 2112 139 3 0 chr17 37584593 37584896 -51919657 + AluSx SINE Alu 1 304 -8 443 303 119 31 chr17 37584896 37584975 -51919578 - L1MEd LINE L1 -5461 658 587 2409 88 3 0 chr17 37585207 37585514 -51919039 + AluSp SINE Alu 1 308 -5 959 69 0 0 chr17 37585664 37585780 -51918773 + AluSp/q SINE Alu 174 289 -24 1829 51 5 0 chr17 37586470 37586685 -51917868 + AluY SINE Alu 83 298 -13 1396 95 0 6 chr17 37587297 37587529 -51917024 - AluSg/x SINE Alu 0 333 103 26 0 0 0 chr17 37588059 37588085 -51916468 + AT_rich Low_complexity Low_complexity 1 26 0 3641 227 123 14 chr17 37588369 37588663 -51915890 - L1MC4 LINE L1 0 8042 7781 1917 152 3 7 chr17 37588663 37588973 -51915580 - AluSx SINE Alu -3 309 1 3641 227 123 14 chr17 37588973 37589815 -51914738 - L1MC4 LINE L1 -261 7781 6686 402 21 0 0 chr17 37589815 37589862 -51914691 + (TG)n Simple_repeat Simple_repeat 2 48 0 3641 227 123 14 chr17 37589862 37589920 -51914633 - L1MC4 LINE L1 -1356 6686 6636 1876 135 17 20 chr17 37589933 37590230 -51914323 + AluSx SINE Alu 1 296 -16 2197 114 0 3 chr17 37590232 37590530 -51914023 + AluSg SINE Alu 1 297 -13 1191 138 0 0 chr17 37590530 37590697 -51913856 + AluSg/x SINE Alu 132 298 -12 433 259 153 5 chr17 37590732 37590921 -51913632 - L1MC4a LINE L1 -1193 6615 6444 1515 188 11 11 chr17 37591236 37591507 -51913046 - AluJb SINE Alu -36 276 6 240 97 0 0 chr17 37591509 37591540 -51913013 - Alu SINE Alu -265 36 6 239 167 0 0 chr17 37591542 37591578 -51912975 - Alu SINE Alu -266 36 1 396 319 59 11 chr17 37591648 37591918 -51912635 - L1 LINE L1 -1129 5017 4735 323 211 99 56 chr17 37591997 37592139 -51912414 - L1 LINE L1 -1549 4597 4450 1625 165 9 38 chr17 37592208 37592524 -51912029 + AluJo SINE Alu 6 312 0 1884 159 0 17 chr17 37592539 37592841 -51911712 + AluJo SINE Alu 1 297 -15 277 388 0 0 chr17 37592981 37593066 -51911487 - L2 LINE L2 -3 3269 3185 23 33 0 0 chr17 37593109 37593139 -51911414 + AT_rich Low_complexity Low_complexity 1 30 0 1621 121 0 9 chr17 37593537 37593768 -51910785 - L1PB1 LINE L1 0 6151 5923 1904 147 0 32 chr17 37593788 37594100 -51910453 - AluSx SINE Alu -10 302 1 649 197 77 0 chr17 37594104 37594221 -51910332 - FLAM_C SINE Alu -16 127 2 237 65 0 0 chr17 37594501 37594532 -51910021 + (TG)n Simple_repeat Simple_repeat 2 32 0 1142 69 0 7 chr17 37594794 37594938 -51909615 - AluSg/x SINE Alu -14 296 154 722 90 0 0 chr17 37594938 37595027 -51909526 - AluY SINE Alu -221 90 2 1202 117 6 0 chr17 37595033 37595196 -51909357 - AluSg/x SINE Alu -15 297 134 1804 163 3 17 chr17 37595196 37595496 -51909057 - AluSx SINE Alu -16 296 1 510 17 0 0 chr17 37596414 37596473 -51908080 + (CA)n Simple_repeat Simple_repeat 2 60 0 1652 191 7 14 chr17 37597027 37597321 -51907232 - AluJb SINE Alu -20 292 1 1254 195 23 65 chr17 37597607 37597914 -51906639 - AluJo SINE Alu -8 294 1 1994 141 0 17 chr17 37598812 37599110 -51905443 - AluSx SINE Alu -13 299 7 2365 91 0 3 chr17 37599275 37599572 -51904981 + AluY SINE Alu 3 298 -13 2166 181 51 22 chr17 37599693 37600147 -51904406 - MLT1C LTR MaLR 0 467 1 416 301 8 45 chr17 37600149 37600282 -51904271 - MLT1C-int LTR MaLR -2 1369 1242 * 1232 219 61 52 chr17 37600281 37600379 -51904174 - MLT1C-int LTR MaLR -95 1276 1180 2204 126 0 3 chr17 37600379 37600681 -51903872 + AluSx SINE Alu 2 302 -10 1232 219 61 52 chr17 37600681 37600910 -51903643 - MLT1C-int LTR MaLR -191 1180 946 189 0 0 0 chr17 37600969 37600990 -51903563 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 834 194 0 0 chr17 37601049 37601183 -51903370 + FAM SINE Alu 1 44 -5 1025 152 0 33 chr17 37601183 37601367 -51903186 - MER47B DNA MER2_type -84 334 157 1289 180 41 34 chr17 37601367 37601514 -51903039 - AluJb SINE Alu -15 297 152 7254 112 19 24 chr17 37601514 37602589 -51901964 - MER11C LTR ERVK -2 1069 1 1289 180 41 34 chr17 37602589 37602736 -51901817 - AluJb SINE Alu -160 152 1 1803 156 121 48 chr17 37602864 37603261 -51901292 + Tigger1 DNA MER2_type 2 427 -1991 * 4683 129 34 7 chr17 37603252 37603990 -51900563 + Tigger1 DNA MER2_type 1326 2083 -335 439 186 0 0 chr17 37604023 37604093 -51900460 + FLAM SINE Alu 50 119 -24 216 0 0 0 chr17 37604095 37604119 -51900434 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 394 241 0 0 chr17 37604139 37604222 -51900331 + Tigger1 DNA MER2_type 2109 2191 -227 534 65 0 39 chr17 37604287 37604364 -51900189 + AluJ/FRAM SINE Alu 231 304 -8 2200 90 3 42 chr17 37604368 37604678 -51899875 + AluY SINE Alu 1 298 -13 204 254 48 32 chr17 37604830 37604893 -51899660 + MIR SINE MIR 14 77 -185 198 215 154 100 chr17 37604896 37605026 -51899527 + MIR SINE MIR 44 180 -82 22 0 0 0 chr17 37606049 37606071 -51898482 + AT_rich Low_complexity Low_complexity 1 22 0 2161 198 63 11 chr17 37606803 37607323 -51897230 - L1MB4 LINE L1 -7 6173 5627 1641 163 39 14 chr17 37607337 37607620 -51896933 - AluJo SINE Alu -22 290 1 277 231 207 0 chr17 37607622 37607743 -51896810 - L1MB4 LINE L1 -816 5330 5185 2000 117 10 29 chr17 37607748 37608055 -51896498 - AluSx SINE Alu -11 301 1 1796 223 136 29 chr17 37608055 37608558 -51895995 + L1M4 LINE L1 4187 4635 -1511 2287 85 3 7 chr17 37608558 37608852 -51895701 + AluY SINE Alu 1 293 -18 2301 117 7 0 chr17 37608854 37609161 -51895392 + AluSx SINE Alu 1 309 -3 1796 223 136 29 chr17 37609161 37609277 -51895276 + L1M4 LINE L1 4635 4876 -1270 1856 164 0 0 chr17 37609280 37609555 -51894998 + AluSx SINE Alu 2 276 -36 406 153 0 0 chr17 37609578 37609637 -51894916 + AluSg/x SINE Alu 213 271 -38 330 211 28 0 chr17 37609637 37609746 -51894807 + GA-rich Low_complexity Low_complexity 1 112 0 1865 187 82 33 chr17 37609747 37610065 -51894488 + L1M4 LINE L1 4868 5215 -944 1806 145 3 53 chr17 37610065 37610383 -51894170 + AluJo SINE Alu 1 302 -10 1865 187 82 33 chr17 37610383 37610596 -51893957 + L1M4 LINE L1 5215 5416 -743 1434 178 0 35 chr17 37610610 37610868 -51893685 + AluJo SINE Alu 51 299 -13 1594 103 94 0 chr17 37611312 37611536 -51893017 - AluSq SINE Alu -68 245 1 2184 131 3 0 chr17 37612194 37612506 -51892047 + AluSq SINE Alu 1 313 0 912 132 0 0 chr17 37612526 37612647 -51891906 + FLAM_C SINE Alu 1 121 -22 383 296 53 7 chr17 37612811 37612963 -51891590 - MIR SINE MIR -21 241 83 2431 82 0 10 chr17 37613030 37613335 -51891218 + AluSq SINE Alu 1 302 -11 439 260 24 16 chr17 37613370 37613497 -51891056 + MER5B DNA MER1_type 50 177 -1 2332 110 0 0 chr17 37614206 37614507 -51890046 - AluSx SINE Alu -11 301 1 383 296 53 7 chr17 37614574 37614726 -51889827 + MIR SINE MIR 83 241 -21 517 229 114 53 chr17 37614971 37615015 -51889538 - L1ME4a LINE L1 -46 6075 6035 2107 112 10 7 chr17 37615015 37615311 -51889242 + AluSc SINE Alu 1 297 -12 517 229 114 53 chr17 37615311 37615528 -51889025 - L1ME4a LINE L1 -86 6035 5798 958 183 16 5 chr17 37615537 37615723 -51888830 - MER5A DNA MER1_type 0 189 2 1689 185 0 3 chr17 37615880 37616166 -51888387 - AluJb SINE Alu -25 287 3 2817 163 20 57 chr17 37616223 37616406 -51888147 + L1MA10 LINE L1 5736 5924 -410 2517 50 0 20 chr17 37616406 37616708 -51887845 - AluY SINE Alu -15 296 1 2817 163 20 57 chr17 37616708 37617136 -51887417 + L1MA10 LINE L1 5924 6324 -10 1837 169 0 23 chr17 37617136 37617443 -51887110 - AluJo SINE Alu -12 300 1 198 352 49 14 chr17 37617642 37617784 -51886769 - L2 LINE L2 -3 3310 3164 724 234 49 90 chr17 37617895 37618241 -51886312 + MER45C DNA AcHobo 118 449 -504 513 255 99 42 chr17 37618329 37618541 -51886012 + MER45C DNA AcHobo 394 617 -336 367 113 19 0 chr17 37618542 37618595 -51885958 + MER45C DNA AcHobo 900 953 0 476 187 0 37 chr17 37619692 37619799 -51884754 + MIR SINE MIR 150 252 -10 329 265 112 68 chr17 37620972 37621221 -51883332 + MLT1K LTR MaLR 278 537 -51 385 259 65 0 chr17 37621402 37621510 -51883043 - MIR SINE MIR -61 147 33 497 167 10 0 chr17 37622200 37622302 -51882251 + CT-rich Low_complexity Low_complexity 2 104 0 4533 43 0 2 chr17 37622302 37622875 -51881678 - L1PA3 LINE L1 0 6155 5598 2464 84 28 4 chr17 37623147 37623580 -51880973 - L1PA3 LINE L1 -561 5593 5156 386 349 74 0 chr17 37623915 37624064 -51880489 - L2 LINE L2 0 3272 3113 2266 102 7 0 chr17 37624693 37624996 -51879557 - AluSg SINE Alu -5 305 1 207 300 56 0 chr17 37625752 37625842 -51878711 + L2 LINE L2 3169 3263 -9 558 275 62 10 chr17 37626036 37626229 -51878324 - MIR SINE MIR -55 207 5 2123 106 0 31 chr17 37626239 37626559 -51877994 - AluSg SINE Alu 0 310 1 1231 176 147 7 chr17 37626800 37627107 -51877446 + MER69 DNA AcHobo 1937 2286 -240 2395 57 0 3 chr17 37627112 37627437 -51877116 - AluY SINE Alu 0 326 3 1894 165 16 3 chr17 37627449 37627770 -51876783 - L1PA16 LINE L1 -20 6146 5822 314 281 21 0 chr17 37628111 37628207 -51876346 - MIR SINE MIR -87 121 24 400 269 39 8 chr17 37629447 37629577 -51874976 + MIR3 SINE MIR 60 193 -15 2112 109 6 67 chr17 37629704 37630034 -51874519 + AluSg SINE Alu 1 310 0 561 273 10 68 chr17 37630440 37630645 -51873908 + MER91A DNA MER1_type 1 193 -3 338 247 53 146 chr17 37630914 37631161 -51873392 + L2 LINE L2 3031 3254 -18 1961 100 4 0 chr17 37632145 37632396 -51872157 + AluSg SINE Alu 46 297 -13 686 272 130 0 chr17 37633470 37633709 -51870844 - L2 LINE L2 -2025 1289 1020 1907 162 0 0 chr17 37633716 37634013 -51870540 - AluJb SINE Alu -13 299 3 375 284 28 0 chr17 37634076 37634185 -51870368 + MIR3 SINE MIR 47 158 -50 2388 86 0 6 chr17 37634311 37634343 -51870210 - AluY SINE Alu 0 311 280 189 0 0 0 chr17 37634343 37634364 -51870189 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2388 86 0 6 chr17 37634364 37634644 -51869909 - AluY SINE Alu -31 280 1 414 217 0 0 chr17 37634836 37634928 -51869625 + MER5A DNA MER1_type 13 104 -85 216 195 0 0 chr17 37635558 37635599 -51868954 - L2 LINE L2 -216 3056 3016 261 238 11 17 chr17 37635642 37635823 -51868730 + (CA)n Simple_repeat Simple_repeat 1 180 0 293 258 0 0 chr17 37635843 37635909 -51868644 + (CA)n Simple_repeat Simple_repeat 1 66 0 230 306 148 9 chr17 37637694 37637802 -51866751 - MIR3 SINE MIR -2 206 84 1701 200 18 98 chr17 37638048 37638524 -51866029 + L1MC3 LINE L1 7315 7749 -36 2506 61 0 0 chr17 37638524 37638818 -51865735 - AluY SINE Alu -17 294 1 1701 200 18 98 chr17 37638818 37638851 -51865702 + L1MC3 LINE L1 7749 7783 -2 2271 99 0 0 chr17 37638851 37639133 -51865420 - AluSq SINE Alu -31 282 1 265 125 0 0 chr17 37639133 37639181 -51865372 + L1MD3 LINE L1 7947 7994 -1 227 200 0 31 chr17 37639288 37639353 -51865200 + GA-rich Low_complexity Low_complexity 4 66 0 1729 181 7 3 chr17 37639407 37639700 -51864853 + AluJb SINE Alu 1 294 -18 1865 157 36 83 chr17 37639713 37640158 -51864395 + L1MB7 LINE L1 5748 6171 -13 251 346 106 0 chr17 37640263 37640367 -51864186 + L2 LINE L2 3140 3254 -18 1368 163 117 4 chr17 37640441 37640737 -51863816 - AluJo SINE Alu 0 325 1 181 307 59 10 chr17 37641661 37641762 -51862791 + MIR SINE MIR 127 232 -30 553 139 150 139 chr17 37642475 37642516 -51862037 + MER53 DNA DNA 1 40 -149 2387 94 0 0 chr17 37642516 37642815 -51861738 + AluSg SINE Alu 1 299 -11 553 139 150 139 chr17 37642815 37642960 -51861593 + MER53 DNA DNA 40 189 0 1801 78 4 16 chr17 37644135 37644377 -51860176 + AluSq SINE Alu 1 239 -74 703 56 11 0 chr17 37644378 37644468 -51860085 + AluSg/x SINE Alu 201 291 -21 387 237 127 25 chr17 37645046 37645164 -51859389 - MIR SINE MIR -122 140 11 2256 87 10 3 chr17 37645198 37645487 -51859066 + AluSc SINE Alu 1 291 -18 309 340 84 37 chr17 37645715 37646036 -51858517 - L2 LINE L2 -338 2976 2641 570 246 54 6 chr17 37646152 37646319 -51858234 - HAL1 LINE L1 -758 1749 1575 6142 147 37 25 chr17 37646344 37648127 -51856426 + L1PB2 LINE L1 4357 6144 -7 413 121 0 30 chr17 37648137 37648203 -51856350 - HAL1 LINE L1 -917 1590 1527 518 276 107 5 chr17 37648276 37648472 -51856081 + L2 LINE L2 2865 3080 -233 22 0 0 0 chr17 37648490 37648512 -51856041 + AT_rich Low_complexity Low_complexity 1 22 0 776 141 47 8 chr17 37648532 37648660 -51855893 + FLAM_A SINE Alu 1 133 0 1110 260 55 33 chr17 37648742 37649466 -51855087 + L1ME3A LINE L1 4931 5681 -481 1755 188 47 52 chr17 37649566 37649608 -51854945 + L1ME3A LINE L1 5694 5735 -435 2500 85 3 0 chr17 37649608 37649915 -51854638 + AluSp SINE Alu 1 308 -5 1755 188 47 52 chr17 37649915 37650361 -51854192 + L1ME3A LINE L1 5735 6163 -7 2755 125 9 24 chr17 37650535 37650905 -51853648 + L1MB4 LINE L1 5454 5817 -363 2383 102 0 0 chr17 37650905 37651209 -51853344 + AluY SINE Alu 2 305 -6 2755 125 9 24 chr17 37651209 37651293 -51853260 + L1MB4 LINE L1 5817 5901 -279 739 259 94 43 chr17 37651293 37651621 -51852932 - L1M4 LINE L1 -1236 4910 4566 309 236 28 0 chr17 37651649 37651721 -51852832 - MIR SINE MIR -112 150 77 819 127 56 0 chr17 37652054 37652180 -51852373 + FLAM_C SINE Alu 1 133 0 2119 97 0 0 chr17 37652204 37652473 -51852080 - AluY SINE Alu -16 295 27 2419 79 26 3 chr17 37652524 37652827 -51851726 - AluSg SINE Alu 0 310 1 313 301 115 6 chr17 37653007 37653163 -51851390 + MLT1K LTR MaLR 23 195 -393 4296 123 13 0 chr17 37653656 37654283 -51850270 + MER41B LTR ERV1 1 635 0 180 0 0 0 chr17 37654545 37654565 -51849988 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 6354 99 30 0 chr17 37654565 37655564 -51848989 - L1PA10 LINE L1 -21 6147 5123 * 13808 121 9 3 chr17 37655561 37657670 -51846883 + L1P LINE L1 2514 4636 -1510 11295 112 18 42 chr17 37658042 37658716 -51845837 - Tigger1 DNA MER2_type -637 1781 1092 2188 97 0 10 chr17 37658716 37659014 -51845539 + AluSg1 SINE Alu 15 309 0 11295 112 18 42 chr17 37659014 37660141 -51844412 - Tigger1 DNA MER2_type -1326 1092 24 241 330 97 0 chr17 37660179 37660282 -51844271 + L2 LINE L2 3144 3256 -16 186 133 17 50 chr17 37660340 37660400 -51844153 + T-rich Low_complexity Low_complexity 2 59 0 1190 173 0 0 chr17 37660673 37660864 -51843689 + AluJo SINE Alu 3 193 -119 2379 105 0 0 chr17 37660905 37661211 -51843342 - AluSx SINE Alu -5 307 2 364 148 16 0 chr17 37661221 37661282 -51843271 - MER5A DNA MER1_type -118 71 10 267 209 171 19 chr17 37661646 37661751 -51842802 - L2 LINE L2 -2 3311 3191 549 280 0 13 chr17 37662521 37662678 -51841875 + MIR SINE MIR 108 262 0 1347 164 0 9 chr17 37662829 37663049 -51841504 - AluJo SINE Alu -8 304 87 374 216 52 35 chr17 37663191 37663307 -51841246 - MIR3 SINE MIR -14 194 77 233 303 197 11 chr17 37663451 37663639 -51840914 + MIR SINE MIR 13 235 -27 469 280 100 35 chr17 37663890 37664151 -51840402 + L2 LINE L2 3032 3309 -4 317 143 0 16 chr17 37666205 37666268 -51838285 + (TC)n Simple_repeat Simple_repeat 1 62 0 3466 114 64 9 chr17 37667697 37668231 -51836322 + L1PA16 LINE L1 5604 6166 0 733 167 7 43 chr17 37668367 37668505 -51836048 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr17 37668518 37668541 -51836012 + AT_rich Low_complexity Low_complexity 1 23 0 242 250 31 0 chr17 37668585 37668649 -51835904 - L2 LINE L2 0 3313 3248 348 333 14 14 chr17 37669241 37669379 -51835174 + MIR3 SINE MIR 49 186 -22 * 515 280 43 38 chr17 37669352 37669538 -51835015 + L2 LINE L2 2904 3090 -182 3773 147 15 16 chr17 37669586 37670191 -51834362 - Tigger1 DNA MER2_type 0 2418 1815 272 207 17 0 chr17 37670817 37670875 -51833678 + MER20 DNA MER1_type 161 219 0 230 283 35 35 chr17 37671312 37671425 -51833128 + L2 LINE L2 2251 2363 -951 990 210 14 5 chr17 37671452 37671666 -51832887 + MER20 DNA MER1_type 4 219 0 783 274 128 16 chr17 37671689 37672252 -51832301 + L2 LINE L2 2708 3313 0 779 153 0 51 chr17 37672374 37672511 -51832042 - FLAM_A SINE Alu -3 130 1 2379 206 28 59 chr17 37672522 37672640 -51831913 - L1MB7 LINE L1 -11 6173 6053 2226 131 0 3 chr17 37672640 37672953 -51831600 - AluSx SINE Alu 0 312 1 2379 206 28 59 chr17 37672953 37673315 -51831238 - L1MB7 LINE L1 -131 6053 5723 2027 121 46 26 chr17 37673315 37673621 -51830932 + AluSx SINE Alu 1 312 0 2379 206 28 59 chr17 37673621 37673846 -51830707 - L1MB7 LINE L1 -461 5723 5493 415 204 46 28 chr17 37673953 37674061 -51830492 + MER5B DNA MER1_type 55 164 -14 208 245 0 0 chr17 37675337 37675386 -51829167 + MIR3 SINE MIR 140 188 -20 2524 67 0 0 chr17 37675402 37675702 -51828851 - AluY SINE Alu -11 300 1 1607 122 45 4 chr17 37675708 37675954 -51828599 - AluSx SINE Alu -23 289 34 316 229 35 27 chr17 37676143 37676294 -51828259 + MIR3 SINE MIR 11 160 -62 2385 75 0 3 chr17 37676364 37676657 -51827896 - AluY SINE Alu -14 297 6 645 190 16 0 chr17 37676692 37676813 -51827740 + AluSg/x SINE Alu 187 309 -1 384 97 0 0 chr17 37676813 37676875 -51827678 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 609 222 96 0 chr17 37676878 37677013 -51827540 - LTR16C LTR ERVL -51 440 293 204 241 130 28 chr17 37677442 37677550 -51827003 + MIR SINE MIR 128 246 -16 864 115 0 0 chr17 37678269 37678391 -51826162 - L1MB1 LINE L1 -296 5893 5772 304 240 171 0 chr17 37678391 37678520 -51826033 + L1ME4a LINE L1 5754 5904 -217 188 259 86 12 chr17 37678737 37678818 -51825735 - MIR SINE MIR -79 129 43 265 289 134 7 chr17 37679159 37679301 -51825252 - MIR SINE MIR -56 206 47 217 310 163 8 chr17 37679746 37679875 -51824678 - MIR3 SINE MIR -17 191 43 978 102 5 133 chr17 37680737 37680933 -51823620 + AluJb SINE Alu 1 171 -141 705 191 67 52 chr17 37680965 37681159 -51823394 + AluJb SINE Alu 97 293 -19 434 250 83 8 chr17 37681228 37681360 -51823193 - MIR SINE MIR -75 187 46 317 269 245 18 chr17 37681507 37681793 -51822760 - L2 LINE L2 -159 3154 2804 1388 158 90 43 chr17 37681797 37682075 -51822478 - AluJo SINE Alu -16 296 6 239 216 0 0 chr17 37682082 37682133 -51822420 - L2 LINE L2 -515 2799 2749 2404 90 0 0 chr17 37682556 37682855 -51821698 - AluSx SINE Alu -13 299 1 260 136 0 0 chr17 37682991 37683035 -51821518 - L2 LINE L2 -3 3310 3267 2119 40 0 0 chr17 37683206 37683453 -51821100 + L1PA3 LINE L1 5906 6152 -3 32 57 0 0 chr17 37683453 37683506 -51821047 + AT_rich Low_complexity Low_complexity 1 53 0 2176 129 0 0 chr17 37683652 37683946 -51820607 - AluSg SINE Alu -16 294 1 1101 120 13 0 chr17 37684536 37684694 -51819859 + AluSc SINE Alu 140 299 -10 825 166 79 79 chr17 37684694 37684917 -51819636 + L1ME LINE L1 5280 5505 -659 1591 187 53 0 chr17 37684917 37685200 -51819353 + AluJb SINE Alu 1 298 -14 825 166 79 79 chr17 37685200 37685241 -51819312 + L1ME LINE L1 5504 5544 -620 337 288 214 41 chr17 37685242 37685357 -51819196 + L2 LINE L2 2886 2980 -333 2062 140 0 0 chr17 37685357 37685649 -51818904 - AluJb SINE Alu -14 298 7 337 288 214 41 chr17 37685649 37685665 -51818888 + L2 LINE L2 2980 2992 -321 2324 83 10 3 chr17 37685665 37685955 -51818598 - AluSc SINE Alu -17 292 1 337 288 214 41 chr17 37685955 37686187 -51818366 + L2 LINE L2 2992 3313 0 32 75 0 0 chr17 37686480 37686547 -51818006 + AT_rich Low_complexity Low_complexity 1 67 0 709 164 0 86 chr17 37686795 37686935 -51817618 - FLAM_A SINE Alu -5 128 1 2159 95 42 0 chr17 37686960 37687244 -51817309 + AluSx SINE Alu 1 296 -16 2376 84 0 0 chr17 37687312 37687608 -51816945 + AluY SINE Alu 1 296 -15 2411 92 0 13 chr17 37687852 37688168 -51816385 + AluSx SINE Alu 1 312 0 243 125 0 0 chr17 37688541 37688581 -51815972 + (CA)n Simple_repeat Simple_repeat 2 41 0 3383 158 42 54 chr17 37688691 37689622 -51814931 - MER21A LTR ERV1 -18 913 73 380 219 2 0 chr17 37689722 37689804 -51814749 - MER21A LTR ERV1 -780 83 1 833 165 0 0 chr17 37689830 37689963 -51814590 - FLAM_C SINE Alu 0 133 1 487 183 10 67 chr17 37691310 37691414 -51813139 + FLAM_C SINE Alu 21 118 -25 207 0 0 0 chr17 37691421 37691444 -51813109 + (CAAGA)n Simple_repeat Simple_repeat 3 25 0 216 171 0 43 chr17 37691729 37691799 -51812754 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1804 161 18 11 chr17 37691846 37692125 -51812428 + AluJo SINE Alu 1 281 -31 1855 91 0 24 chr17 37692125 37692377 -51812176 - AluSc SINE Alu -8 301 55 1733 92 4 0 chr17 37692478 37692705 -51811848 + AluSg/x SINE Alu 65 292 -20 2163 120 3 3 chr17 37692715 37693015 -51811538 + AluSx SINE Alu 1 300 -12 930 159 29 12 chr17 37693033 37693203 -51811350 + AluSg/x SINE Alu 118 290 -20 295 287 152 24 chr17 37693215 37693379 -51811174 + L1ME1 LINE L1 5962 6146 -20 23 33 0 0 chr17 37693529 37693559 -51810994 + AT_rich Low_complexity Low_complexity 1 30 0 690 120 0 0 chr17 37693629 37693729 -51810824 - HY3 scRNA scRNA -1 100 1 2170 118 3 20 chr17 37693758 37694064 -51810489 + AluSx SINE Alu 1 301 -11 1967 104 83 0 chr17 37694203 37694481 -51810072 + AluSg SINE Alu 1 301 -9 2301 103 3 0 chr17 37694810 37695111 -51809442 + AluSp SINE Alu 1 302 -11 2316 164 5 16 chr17 37695392 37695763 -51808790 + Tigger7 DNA MER2_type 9 375 -2112 1675 161 27 14 chr17 37695796 37696088 -51808465 + AluJo SINE Alu 1 296 -16 2087 103 4 0 chr17 37696118 37696390 -51808163 + AluSp SINE Alu 1 273 -40 1065 130 16 22 chr17 37696491 37696676 -51807877 + AluSg/x SINE Alu 120 303 -7 2023 155 0 0 chr17 37696716 37697019 -51807534 + AluJo SINE Alu 1 303 -9 2069 145 0 3 chr17 37697019 37697329 -51807224 + AluSg SINE Alu 1 309 -1 1021 288 40 21 chr17 37697330 37697799 -51806754 + L1M4 LINE L1 2205 2682 -3464 1399 108 10 21 chr17 37697799 37697993 -51806560 - AluSg/x SINE Alu -13 297 106 402 181 45 75 chr17 37698011 37698057 -51806496 + L1MD1 LINE L1 5317 5363 -996 687 160 0 0 chr17 37698057 37698163 -51806390 + U6 snRNA snRNA 2 107 0 402 181 45 75 chr17 37698163 37698249 -51806304 + L1MD1 LINE L1 5363 5445 -914 977 189 136 45 chr17 37698257 37698525 -51806028 + AluJo SINE Alu 21 310 0 1026 196 129 81 chr17 37698527 37698787 -51805766 + L1MD1 LINE L1 5433 5679 -563 1864 129 39 4 chr17 37698787 37699067 -51805486 - AluSx SINE Alu -22 290 1 1026 196 129 81 chr17 37699067 37699212 -51805341 + L1MD1 LINE L1 5679 6045 -197 284 95 0 0 chr17 37699211 37699253 -51805300 + L1M4c LINE L1 17 58 -6326 * 1914 83 4 0 chr17 37699253 37699493 -51805060 + AluSp SINE Alu 63 303 -10 2320 212 29 31 chr17 37699517 37699858 -51804695 + L1 LINE L1 4432 4773 -1373 2425 95 0 0 chr17 37699858 37700164 -51804389 + AluSp SINE Alu 2 307 -6 2320 212 29 31 chr17 37700164 37700411 -51804142 + L1 LINE L1 4773 5019 -1127 2376 79 7 0 chr17 37700423 37700726 -51803827 + AluSg SINE Alu 1 305 -5 386 349 74 0 chr17 37701355 37701504 -51803049 + L2 LINE L2 3113 3272 0 2463 84 27 7 chr17 37701828 37702272 -51802281 + L1PA8 LINE L1 5148 5593 -561 4635 45 2 10 chr17 37702544 37703123 -51801430 + L1PA8 LINE L1 5598 6171 -1 2415 69 3 0 chr17 37703256 37703559 -51800994 + AluY SINE Alu 1 304 -7 1383 74 11 11 chr17 37704146 37704336 -51800217 - AluSg/x SINE Alu -3 309 120 424 231 143 88 chr17 37704445 37704530 -51800023 + MER102a DNA MER1_type 74 153 -1264 2546 57 3 0 chr17 37704530 37704830 -51799723 + AluSp SINE Alu 1 301 -12 424 231 143 88 chr17 37704830 37704982 -51799571 + MER102a DNA MER1_type 153 324 -6 2363 109 0 0 chr17 37705115 37705419 -51799134 + AluSg SINE Alu 1 304 -6 2384 80 20 3 chr17 37705603 37705903 -51798650 - AluSx SINE Alu -7 305 1 1144 92 0 0 chr17 37706002 37706155 -51798398 - L1PA13 LINE L1 -14 6149 5997 312 289 11 0 chr17 37706242 37706332 -51798221 - L2 LINE L2 0 3272 3182 674 295 31 9 chr17 37706846 37707070 -51797483 + MIR SINE MIR 33 261 -1 241 222 56 0 chr17 37709440 37709512 -51795041 + MIR SINE MIR 117 192 -70 247 113 38 0 chr17 37709540 37709593 -51794960 - L1MB4 LINE L1 0 6180 6126 727 168 35 46 chr17 37709626 37709823 -51794730 - L1MB2 LINE L1 -49 6122 5928 2273 114 3 0 chr17 37710030 37710338 -51794215 - AluSx SINE Alu -3 309 1 909 248 23 5 chr17 37710652 37710870 -51793683 - MER58A DNA MER1_type 0 224 3 2068 132 0 0 chr17 37711063 37711386 -51793167 + AluSx SINE Alu 1 323 0 1909 120 0 0 chr17 37711389 37711647 -51792906 + AluSg SINE Alu 40 297 -13 205 328 0 0 chr17 37711686 37711750 -51792803 + MER5A DNA MER1_type 35 98 -91 385 343 0 0 chr17 37711793 37711930 -51792623 + MIR SINE MIR 49 185 -77 595 259 79 46 chr17 37714635 37714940 -51789613 + L1ME4a LINE L1 5582 5896 -225 522 214 107 25 chr17 37716216 37716375 -51788178 - MER5A DNA MER1_type -7 182 11 2505 68 0 16 chr17 37716502 37716809 -51787744 + AluY SINE Alu 1 302 -9 2325 109 0 3 chr17 37717182 37717493 -51787060 + AluSg SINE Alu 1 310 0 405 0 0 0 chr17 37718078 37718123 -51786430 + (TG)n Simple_repeat Simple_repeat 1 45 0 312 266 55 85 chr17 37718358 37718557 -51785996 - L1ME4a LINE L1 -40 6081 5889 360 264 63 75 chr17 37718654 37718893 -51785660 - L1ME4a LINE L1 -1989 5819 5584 273 237 41 31 chr17 37719297 37719394 -51785159 - MER5B DNA MER1_type 0 178 81 433 301 7 14 chr17 37719591 37719737 -51784816 + MIR SINE MIR 70 214 -48 33 43 0 0 chr17 37720267 37720314 -51784239 + AT_rich Low_complexity Low_complexity 1 47 0 2151 110 17 3 chr17 37722248 37722548 -51782005 + AluSp SINE Alu 1 304 -9 338 239 90 75 chr17 37723046 37723301 -51781252 + L1ME4a LINE L1 5841 6099 -22 1311 142 21 29 chr17 37723409 37723648 -51780905 + Tigger7 DNA MER2_type 2255 2491 0 181 271 61 83 chr17 37723686 37723777 -51780776 - L2 LINE L2 -5 3308 3221 2216 92 13 23 chr17 37723777 37724080 -51780473 - AluSq SINE Alu -13 300 1 181 271 61 83 chr17 37724080 37724169 -51780384 - L2 LINE L2 -92 3221 3132 407 237 53 18 chr17 37724175 37724289 -51780264 + MIR SINE MIR 13 130 -132 1793 176 27 0 chr17 37724898 37725199 -51779354 + AluJo SINE Alu 1 309 -3 1763 143 40 4 chr17 37725400 37725673 -51778880 + AluSg SINE Alu 1 283 -27 25 0 0 0 chr17 37725673 37725698 -51778855 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr17 37725765 37725801 -51778752 + AT_rich Low_complexity Low_complexity 1 36 0 2324 83 20 7 chr17 37726230 37726531 -51778022 + AluSx SINE Alu 1 305 -7 527 146 16 16 chr17 37726639 37726762 -51777791 + GA-rich Low_complexity Low_complexity 2 124 0 368 350 40 48 chr17 37727457 37727728 -51776825 + L2 LINE L2 2379 2648 -666 1988 133 3 17 chr17 37727728 37728030 -51776523 - AluSx SINE Alu -14 298 1 368 350 40 48 chr17 37728030 37728129 -51776424 + L2 LINE L2 2648 2746 -568 1941 122 16 50 chr17 37728457 37728777 -51775776 - AluSx SINE Alu -2 310 2 790 266 19 0 chr17 37728954 37729161 -51775392 + MIR SINE MIR 31 241 -21 181 109 43 0 chr17 37729638 37729684 -51774869 + (TA)n Simple_repeat Simple_repeat 1 48 0 1860 152 3 3 chr17 37729684 37730001 -51774552 - AluSx SINE Alu 0 317 1 210 303 15 0 chr17 37730086 37730152 -51774401 + L2 LINE L2 3239 3305 -8 2469 104 155 21 chr17 37730458 37730946 -51773607 + LTR61 LTR ERV1 2 595 0 252 228 0 0 chr17 37731424 37731481 -51773072 + MIR SINE MIR 82 138 -70 256 309 17 101 chr17 37732053 37732231 -51772322 - L2 LINE L2 -88 3184 3022 1068 57 0 7 chr17 37733272 37733412 -51771141 - L1PA15 LINE L1 -3 6162 6024 3309 158 4 13 chr17 37733517 37734388 -51770165 - L1P4 LINE L1 -578 5587 4728 1579 179 0 44 chr17 37734723 37735078 -51769475 - AluJb SINE Alu 0 342 1 464 261 56 81 chr17 37735362 37735596 -51768957 + MIR SINE MIR 20 247 -15 340 301 121 12 chr17 37736509 37736675 -51767878 + MIR3 SINE MIR 16 199 -9 187 339 18 9 chr17 37737355 37737464 -51767089 + L3 LINE CR1 1292 1401 -176 353 175 38 12 chr17 37738148 37738228 -51766325 - MIR SINE MIR -86 176 95 247 349 28 0 chr17 37738375 37738481 -51766072 + MIR SINE MIR 74 182 -80 222 256 154 0 chr17 37738534 37738612 -51765941 + MIR SINE MIR 108 197 -65 408 264 82 33 chr17 37738822 37739004 -51765549 - MIR3 SINE MIR -4 204 14 881 123 38 85 chr17 37739344 37739555 -51764998 - MER3 DNA MER1_type -4 205 5 1906 173 102 48 chr17 37739722 37740201 -51764352 + MLT1D LTR MaLR 1 505 0 336 269 0 0 chr17 37741489 37741567 -51762986 - MER2 DNA MER2_type 0 345 268 1711 152 3 14 chr17 37741692 37741988 -51762565 + L1PB4 LINE L1 5861 6153 -3 2119 121 0 0 chr17 37742136 37742417 -51762136 + AluSg SINE Alu 1 281 -29 187 104 42 0 chr17 37742418 37742466 -51762087 + (CA)n Simple_repeat Simple_repeat 1 50 0 376 192 8 108 chr17 37742486 37742606 -51761947 - L1MC/D LINE L1 -446 5865 5758 427 163 0 25 chr17 37743312 37743392 -51761161 + AluJb SINE Alu 160 237 -75 412 267 111 6 chr17 37743828 37744008 -51760545 + MIR SINE MIR 15 213 -49 1569 203 33 3 chr17 37744040 37744341 -51760212 - AluJb SINE Alu -2 310 1 2513 85 0 0 chr17 37746739 37747045 -51757508 + AluSc SINE Alu 1 306 -3 913 277 127 3 chr17 37747358 37747665 -51756888 - MLT1H1 LTR MaLR -201 354 10 1519 204 152 18 chr17 37747703 37748145 -51756408 - MLT1D LTR MaLR -4 501 1 1040 229 33 33 chr17 37748205 37748537 -51756016 - L1MC/D LINE L1 -765 5450 5119 559 209 0 0 chr17 37748540 37748650 -51755903 - AluSg/x SINE Alu -3 307 198 426 235 25 0 chr17 37748749 37748868 -51755685 - L1MC/D LINE L1 -1137 5078 4957 225 316 44 37 chr17 37748869 37749005 -51755548 - L1MC/D LINE L1 -2572 3643 3507 1769 288 37 61 chr17 37749037 37749787 -51754766 + HERV16 LTR ERVL 821 1552 -3444 * 1830 278 55 48 chr17 37749785 37750360 -51754193 + HERV16 LTR ERVL 2202 2784 -2212 2444 97 3 0 chr17 37750360 37750671 -51753882 + AluSp SINE Alu 1 312 -1 1830 278 55 48 chr17 37750671 37750808 -51753745 + HERV16 LTR ERVL 2784 2919 -2077 230 270 40 0 chr17 37750809 37750883 -51753670 + L1ME LINE L1 4758 4834 -1312 1211 206 97 77 chr17 37750890 37751293 -51753260 + MLT2B1 LTR ERVL 110 520 0 633 260 43 25 chr17 37751322 37751557 -51752996 + L1ME LINE L1 4925 5163 -983 411 316 51 0 chr17 37752866 37753062 -51751491 - L1MC/D LINE L1 -4594 1802 1597 377 303 43 19 chr17 37754902 37755044 -51749509 + L1ME LINE L1 5583 5731 -390 2199 135 0 0 chr17 37755044 37755341 -51749212 + AluSx SINE Alu 1 297 -15 377 303 43 19 chr17 37755341 37755360 -51749193 + L1ME LINE L1 5731 5748 -373 1951 184 17 14 chr17 37755461 37755808 -51748745 + MER7A DNA MER2_type 1 346 0 374 307 27 27 chr17 37756317 37756467 -51748086 + MLT1L LTR MaLR 342 491 -124 1502 166 63 46 chr17 37756510 37756794 -51747759 - AluJo SINE Alu -23 289 1 1016 74 27 20 chr17 37757092 37757241 -51747312 + L1PA13 LINE L1 6014 6163 0 611 154 231 19 chr17 37759630 37759786 -51744767 + MER53 DNA DNA 1 189 0 848 198 12 12 chr17 37759917 37760089 -51744464 - MER5B DNA MER1_type -6 172 1 2290 131 39 152 chr17 37760443 37761029 -51743524 + MLT2B1 LTR ERVL 1 520 0 491 281 79 101 chr17 37761547 37761926 -51742627 - MLT1K LTR MaLR 0 588 217 1267 189 30 107 chr17 37761926 37762291 -51742262 + MER58B DNA MER1_type 1 337 -4 491 281 79 101 chr17 37762291 37762327 -51742226 - MLT1K LTR MaLR -371 217 182 2101 101 3 0 chr17 37762727 37763037 -51741516 - AluSq SINE Alu 0 311 1 410 250 0 10 chr17 37763574 37763670 -51740883 - MER94 DNA DNA 0 134 40 355 365 54 0 chr17 37763759 37763907 -51740646 + MER91A DNA MER1_type 39 194 -2 1673 164 3 14 chr17 37764170 37764462 -51740091 - AluJo SINE Alu -22 290 2 825 245 27 0 chr17 37764889 37765073 -51739480 - MER5A DNA MER1_type 0 189 1 361 254 84 15 chr17 37765079 37765290 -51739263 - MLT1J2 LTR MaLR -120 330 63 309 26 0 0 chr17 37765735 37765773 -51738780 + (TG)n Simple_repeat Simple_repeat 2 39 0 463 278 78 120 chr17 37766005 37766473 -51738080 - L1MC4a LINE L1 -5 6116 5677 1913 141 3 0 chr17 37766473 37766771 -51737782 - AluSx SINE Alu -13 299 1 463 278 78 120 chr17 37766771 37766893 -51737660 - L1MC4a LINE L1 -444 5677 5551 764 296 9 0 chr17 37767070 37767290 -51737263 - MER58A DNA MER1_type 0 224 3 1935 129 3 0 chr17 37767483 37767799 -51736754 + AluSx SINE Alu 1 317 0 440 343 0 0 chr17 37767950 37768087 -51736466 + MIR SINE MIR 49 185 -77 577 291 65 36 chr17 37770797 37771103 -51733450 + L1ME4a LINE L1 5582 5896 -225 182 222 37 37 chr17 37771306 37771360 -51733193 + L2 LINE L2 1581 1634 -1680 668 194 103 24 chr17 37772379 37772544 -51732009 - MER5A DNA MER1_type -1 188 11 2179 101 3 3 chr17 37773029 37773337 -51731216 + AluSg SINE Alu 1 308 -2 462 36 0 0 chr17 37773913 37773969 -51730584 + (TG)n Simple_repeat Simple_repeat 1 56 0 198 0 0 0 chr17 37773968 37773990 -51730563 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 394 263 82 120 chr17 37774209 37774701 -51729852 - L1ME4a LINE L1 -40 6081 5606 276 253 50 30 chr17 37775138 37775237 -51729316 - MER5B DNA MER1_type 0 178 78 517 337 20 25 chr17 37775374 37775576 -51728977 + MIR SINE MIR 13 213 -49 25 65 0 0 chr17 37776118 37776164 -51728389 + AT_rich Low_complexity Low_complexity 1 46 0 532 301 48 99 chr17 37778365 37778930 -51725623 + L1ME4a LINE L1 5578 6113 -8 697 302 40 9 chr17 37780410 37780632 -51723921 - MIR SINE MIR -1 261 33 188 150 75 25 chr17 37780664 37780704 -51723849 - MIR SINE MIR -64 198 157 311 322 11 0 chr17 37781145 37781235 -51723318 + L2 LINE L2 3182 3272 0 1083 112 0 0 chr17 37781322 37781474 -51723079 + L1PA13 LINE L1 5997 6148 -15 261 57 0 0 chr17 37781474 37781509 -51723044 + (CA)n Simple_repeat Simple_repeat 2 36 0 1995 108 27 3 chr17 37781588 37781885 -51722668 + AluSx SINE Alu 5 308 -4 828 71 47 24 chr17 37781987 37782156 -51722397 + GA-rich Low_complexity Low_complexity 2 174 0 364 355 82 57 chr17 37782820 37783121 -51721432 + L2 LINE L2 2352 2644 -670 1028 52 32 7 chr17 37783121 37783276 -51721277 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 1783 135 0 21 chr17 37783278 37783566 -51720987 - AluSx SINE Alu -30 282 1 364 355 82 57 chr17 37783566 37783749 -51720804 + L2 LINE L2 2644 2851 -463 2081 98 3 46 chr17 37783983 37784309 -51720244 - AluSx SINE Alu 0 312 1 830 297 18 4 chr17 37784484 37784713 -51719840 + MIR SINE MIR 31 262 0 278 261 31 46 chr17 37784845 37784975 -51719578 + L1ME4a LINE L1 5715 5842 -279 343 228 59 20 chr17 37785065 37785166 -51719387 + L1ME4a LINE L1 6013 6117 -4 2135 114 0 3 chr17 37785180 37785477 -51719076 - AluSx SINE Alu -16 296 1 231 306 0 0 chr17 37785563 37785625 -51718928 + L2 LINE L2 3244 3305 -8 254 284 147 0 chr17 37786326 37786421 -51718132 + MIR SINE MIR 30 138 -70 288 320 22 90 chr17 37786984 37787162 -51717391 - L2 LINE L2 -79 3193 3028 217 238 238 10 chr17 37787732 37787833 -51716720 + L2 LINE L2 3144 3267 -5 6767 78 3 22 chr17 37788213 37789673 -51714880 - L1PA15 LINE L1 -3 6162 4728 1451 196 11 4 chr17 37790008 37790323 -51714230 - AluJb SINE Alu 0 317 1 588 272 86 39 chr17 37790596 37790828 -51713725 + MIR SINE MIR 5 247 -15 408 301 121 12 chr17 37791740 37791906 -51712647 + MIR3 SINE MIR 16 199 -9 282 293 24 24 chr17 37792576 37792699 -51711854 + L3 LINE CR1 1292 1414 -163 375 292 39 67 chr17 37793262 37793440 -51711113 - MIR SINE MIR 0 262 90 340 335 105 7 chr17 37793570 37793722 -51710831 + MIR SINE MIR 63 229 -33 245 269 154 0 chr17 37793741 37793819 -51710734 + MIR SINE MIR 108 197 -65 450 269 77 28 chr17 37794025 37794207 -51710346 - MIR3 SINE MIR -4 204 14 1054 138 24 48 chr17 37794543 37794753 -51709800 - MER3 DNA MER1_type 0 209 5 1896 177 97 40 chr17 37794923 37795398 -51709155 + MLT1D LTR MaLR 4 505 0 1188 188 140 45 chr17 37796685 37796770 -51707783 - MER2 DNA MER2_type 0 345 270 1606 186 13 3 chr17 37796770 37797076 -51707477 + AluJo SINE Alu 1 309 -3 1188 188 140 45 chr17 37797076 37797304 -51707249 - MER2 DNA MER2_type -75 270 2 191 275 50 50 chr17 37797624 37797704 -51706849 - MIR SINE MIR -8 254 175 1928 167 3 0 chr17 37797709 37798026 -51706527 + 7SLRNA srpRNA srpRNA 3 320 0 332 149 75 0 chr17 37798050 37798117 -51706436 - MIR SINE MIR -84 178 107 495 240 68 36 chr17 37798699 37798943 -51705610 + MER41B LTR ERV1 53 430 -205 1700 95 32 17 chr17 37799051 37799397 -51705156 + MLT2A1 LTR ERVL 1 444 0 6980 119 17 35 chr17 37799397 37800771 -51703782 + HERVL-A1-A1 LTR ERVL 1 1352 -4412 * 17793 58 17 0 chr17 37800769 37802906 -51701647 + HERVL-A1-A1 LTR ERVL 2491 4663 -991 3913 60 6 23 chr17 37802903 37803422 -51701131 + HERVL-A1-A1 LTR ERVL 5145 5654 0 * 3029 80 57 7 chr17 37803422 37803804 -51700749 + MLT2A1 LTR ERVL 1 407 -37 355 52 35 0 chr17 37803804 37803862 -51700691 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 3029 80 57 7 chr17 37803862 37803902 -51700651 + MLT2A1 LTR ERVL 407 444 0 189 0 0 0 chr17 37805201 37805222 -51699331 + (A)n Simple_repeat Simple_repeat 1 21 0 3699 118 8 2 chr17 37806548 37807072 -51697481 + MER1A DNA MER1_type 1 527 0 2723 145 7 0 chr17 37807093 37807534 -51697019 - L1PB3 LINE L1 0 6154 5711 6998 66 7 9 chr17 37808102 37809203 -51695350 + L1PA8 LINE L1 5074 6172 0 202 248 191 19 chr17 37809410 37809515 -51695038 - MIR SINE MIR -127 135 13 3613 65 2 0 chr17 37809636 37810079 -51694474 - MLT2A1 LTR ERVL 0 444 1 265 317 61 20 chr17 37811044 37811197 -51693356 + MIR SINE MIR 103 261 -1 618 293 60 57 chr17 37811511 37811831 -51692722 + L1ME4a LINE L1 5480 5804 -317 1520 170 21 21 chr17 37811831 37812114 -51692439 - AluJb SINE Alu -23 289 7 618 293 60 57 chr17 37812114 37812322 -51692231 + L1ME4a LINE L1 5804 6010 -111 394 254 14 72 chr17 37812713 37812851 -51691702 - LTR28 LTR ERV1 -29 1726 1597 2324 181 33 41 chr17 37812851 37813669 -51690884 - LTR28 LTR ERV1 -141 495 1 2224 117 0 0 chr17 37813930 37814238 -51690315 - AluSg SINE Alu -2 308 1 14927 124 32 28 chr17 37816382 37818452 -51686101 + Tigger1 DNA MER2_type 1 2083 -335 1957 149 0 0 chr17 37818452 37818760 -51685793 + AluSx SINE Alu 5 312 0 14927 124 32 28 chr17 37818760 37819098 -51685455 + Tigger1 DNA MER2_type 2083 2418 0 724 319 44 34 chr17 37819496 37819906 -51684647 + ERVL LTR ERVL 2481 2894 -2870 1001 330 87 18 chr17 37819947 37820453 -51684100 + ERVL LTR ERVL 3081 3621 -2143 686 295 38 53 chr17 37821132 37821560 -51682993 - ERVL LTR ERVL -324 5330 4966 21 0 0 0 chr17 37821867 37821888 -51682665 + AT_rich Low_complexity Low_complexity 1 21 0 2132 113 0 7 chr17 37822069 37822371 -51682182 + AluSx SINE Alu 3 302 -10 1062 223 40 80 chr17 37823404 37823731 -51680822 - LTR53 LTR ERVL -14 505 192 241 330 119 32 chr17 37824732 37824950 -51679603 - L2 LINE L2 -93 3179 2943 2171 121 45 22 chr17 37825639 37825995 -51678558 - THE1B LTR MaLR 0 364 1 1940 109 0 0 chr17 37826082 37826348 -51678205 + AluSx SINE Alu 1 266 -46 1448 219 33 12 chr17 37826400 37826733 -51677820 + MER58B DNA MER1_type 1 340 -1 30 0 0 0 chr17 37826857 37826887 -51677666 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 37827095 37827115 -51677438 + (TAGA)n Simple_repeat Simple_repeat 3 22 0 1871 159 0 6 chr17 37827237 37827551 -51677002 - AluJb SINE Alu 0 312 1 8232 41 1 4 chr17 37827602 37828574 -51675979 + LTR5 LTR ERVK 1 969 0 1210 218 17 3 chr17 37829626 37829924 -51674629 + L1M4 LINE L1 4485 4786 -1360 2142 93 0 13 chr17 37830206 37830508 -51674045 - AluY SINE Alu -13 298 1 259 294 49 68 chr17 37831265 37831428 -51673125 + ERVL LTR ERVL 876 1035 -4729 268 215 11 11 chr17 37831512 37831605 -51672948 + GA-rich Low_complexity Low_complexity 1 93 0 1459 323 27 13 chr17 37831606 37832203 -51672350 + ERVL LTR ERVL 1709 2313 -3451 2132 191 0 3 chr17 37832252 37832618 -51671935 - MLT1A1 LTR MaLR 0 365 1 2789 207 11 26 chr17 37832681 37833252 -51671301 + MER68 LTR ERV1 1 562 0 1560 218 30 22 chr17 37833763 37834125 -51670428 - MLT1A1 LTR MaLR 0 365 1 752 190 112 34 chr17 37834126 37834305 -51670248 + L1PB4 LINE L1 5964 6156 0 356 109 0 0 chr17 37834333 37834388 -51670165 + AluSp/q SINE Alu 249 303 0 1756 244 108 15 chr17 37834406 37835062 -51669491 - L1M4 LINE L1 -1053 5093 4377 364 342 21 58 chr17 37835623 37835813 -51668740 - L1MC4a LINE L1 -1890 5918 5736 634 141 26 128 chr17 37835907 37836063 -51668490 - FLAM_A SINE Alu -2 140 1 255 270 102 0 chr17 37836354 37836492 -51668061 - MIR SINE MIR -10 252 98 392 287 74 16 chr17 37836776 37836898 -51667655 - MIR SINE MIR -72 190 62 636 246 88 29 chr17 37837344 37837584 -51666969 + MIR SINE MIR 2 255 -7 296 282 16 48 chr17 37837643 37837767 -51666786 + MIR SINE MIR 3 122 -140 1919 159 0 0 chr17 37838176 37838485 -51666068 + AluSx SINE Alu 1 309 -3 457 293 38 8 chr17 37838505 37838638 -51665915 - MIR SINE MIR -86 176 40 406 294 85 45 chr17 37838711 37839039 -51665514 - L1MC4a LINE L1 -224 5897 5575 446 323 175 0 chr17 37839082 37839299 -51665254 - MIR SINE MIR -5 257 3 22 80 0 0 chr17 37839391 37839441 -51665112 + AT_rich Low_complexity Low_complexity 1 50 0 324 250 69 0 chr17 37841346 37841418 -51663135 - MER91A DNA MER1_type -1 195 119 425 366 41 0 chr17 37841427 37841599 -51662954 - MER91A DNA MER1_type -17 179 1 245 261 64 34 chr17 37841665 37841775 -51662778 - MIR SINE MIR -63 145 46 231 271 233 15 chr17 37842285 37842418 -51662135 + MIR SINE MIR 31 192 -70 1750 117 0 29 chr17 37842645 37842919 -51661634 + AluSx SINE Alu 30 295 -17 467 299 104 0 chr17 37843055 37843219 -51661334 - MIR SINE MIR -19 243 63 293 261 107 52 chr17 37843335 37843645 -51660908 - L1ME4a LINE L1 -237 5884 5558 739 248 104 18 chr17 37843703 37843925 -51660628 - MIR SINE MIR -11 251 11 358 260 113 100 chr17 37844819 37845192 -51659361 - L1ME4a LINE L1 -23 6098 5715 1016 209 41 23 chr17 37845192 37845412 -51659141 - MER58A DNA MER1_type 0 224 1 358 260 113 100 chr17 37845412 37845558 -51658995 - L1ME4a LINE L1 -406 5715 5572 4121 167 58 24 chr17 37845847 37847132 -51657421 - L1MA9 LINE L1 -1 6311 4873 339 49 39 0 chr17 37847138 37847195 -51657358 - MER41A LTR ERV1 -76 478 418 300 242 0 0 chr17 37847195 37847261 -51657292 - L1ME4a LINE L1 -1261 4885 4820 451 303 21 14 chr17 37847261 37847406 -51657147 - MIR SINE MIR -97 165 20 551 217 17 0 chr17 37847416 37847536 -51657017 - MER20 DNA MER1_type 0 219 98 481 280 35 14 chr17 37847564 37847707 -51656846 - MIR SINE MIR -70 192 47 190 118 0 0 chr17 37848297 37848331 -51656222 + MIR SINE MIR 123 156 -106 1707 169 3 7 chr17 37848631 37848938 -51655615 + AluJo SINE Alu 1 306 -6 301 256 25 16 chr17 37851086 37851207 -51653346 - MER113 DNA MER1_type? -380 141 20 349 287 0 41 chr17 37851631 37851753 -51652800 + L2 LINE L2 2458 2574 -740 548 241 29 105 chr17 37852641 37852813 -51651740 + L1MD3 LINE L1 7705 7844 -151 1538 164 0 33 chr17 37852813 37853112 -51651441 - AluJo SINE Alu -23 289 1 548 241 29 105 chr17 37853112 37853254 -51651299 + L1MD3 LINE L1 7844 7995 0 200 229 115 0 chr17 37853560 37853621 -51650932 - L2 LINE L2 -343 2970 2903 1057 326 35 18 chr17 37858367 37859029 -51645524 - L1MC3 LINE L1 -1629 6156 5484 182 272 48 96 chr17 37863649 37863774 -51640779 - MIR SINE MIR -72 136 18 * 246 313 82 61 chr17 37863754 37863901 -51640652 + MIR SINE MIR 94 243 -19 1860 193 24 3 chr17 37864936 37865273 -51639280 - MER2 DNA MER2_type 0 344 1 330 26 0 0 chr17 37865592 37865631 -51638922 + (CTGGGG)n Simple_repeat Simple_repeat 3 41 0 1503 162 109 26 chr17 37865736 37866076 -51638477 - THE1C LTR MaLR -1 374 7 210 216 0 59 chr17 37866779 37866830 -51637723 + G-rich Low_complexity Low_complexity 1 48 0 258 116 0 0 chr17 37866889 37866932 -51637621 + (CCCCCA)n Simple_repeat Simple_repeat 4 46 0 272 231 20 7 chr17 37867258 37867405 -51637148 + GA-rich Low_complexity Low_complexity 2 150 0 600 244 0 0 chr17 37867921 37868101 -51636452 + (TG)n Simple_repeat Simple_repeat 1 180 0 2905 148 15 8 chr17 37868314 37868795 -51635758 - MER1A DNA MER1_type 0 529 46 627 198 25 0 chr17 37868989 37869110 -51635443 - MLT1C LTR MaLR 0 467 344 282 363 116 35 chr17 37869760 37870190 -51634363 + L2 LINE L2 944 1408 -1906 229 332 145 23 chr17 37870378 37870640 -51633913 + L2 LINE L2 1791 2084 -1230 355 267 78 0 chr17 37870655 37870745 -51633808 - MER117 DNA MER1_type -97 100 4 2209 103 0 0 chr17 37871123 37871425 -51633128 + AluSg SINE Alu 1 302 -8 641 205 0 0 chr17 37871585 37871697 -51632856 + FLAM_A SINE Alu 19 130 -12 1579 126 4 16 chr17 37871909 37872156 -51632397 - AluSx SINE Alu -5 307 64 2382 74 0 0 chr17 37872674 37872971 -51631582 + AluSc SINE Alu 1 297 -12 1401 170 76 24 chr17 37873003 37873292 -51631261 + AluJb SINE Alu 1 304 -8 2064 121 0 3 chr17 37874047 37874352 -51630201 + AluSg SINE Alu 1 304 -6 381 244 64 45 chr17 37874832 37874988 -51629565 + L1MC4 LINE L1 6811 6969 -1073 1549 199 6 10 chr17 37875046 37875358 -51629195 + AluJb SINE Alu 2 312 0 824 177 61 88 chr17 37875359 37875653 -51628900 + L1MC5 LINE L1 6906 7191 -770 627 205 139 12 chr17 37875668 37875834 -51628719 - MER20 DNA MER1_type 0 219 33 566 243 43 16 chr17 37875947 37876132 -51628421 + L1MC5 LINE L1 7311 7500 -461 918 198 86 0 chr17 37876233 37876430 -51628123 + AluJb SINE Alu 92 305 -7 2908 141 13 27 chr17 37876722 37877196 -51627357 + MLT1C LTR MaLR 1 467 0 2171 114 0 0 chr17 37877347 37877655 -51626898 + AluSg1 SINE Alu 1 308 -1 1339 132 0 10 chr17 37877697 37877901 -51626652 + AluSq SINE Alu 33 234 -79 593 160 20 0 chr17 37877903 37878003 -51626550 + AluJb SINE Alu 203 304 -8 2103 130 0 10 chr17 37878004 37878311 -51626242 + AluSg SINE Alu 1 304 -6 2087 124 0 16 chr17 37878321 37878635 -51625918 + AluSc SINE Alu 1 309 0 404 246 97 26 chr17 37878638 37878833 -51625720 + L1MC4a LINE L1 7034 7242 -566 2016 116 0 0 chr17 37878847 37879132 -51625421 + AluSx SINE Alu 16 300 -12 318 258 22 0 chr17 37879132 37879221 -51625332 + L1MC4 LINE L1 7811 7901 -141 1717 166 3 0 chr17 37879679 37879962 -51624591 + AluSx SINE Alu 12 295 -17 2343 80 0 0 chr17 37879964 37880265 -51624288 + AluY SINE Alu 1 301 -10 203 350 17 0 chr17 37880417 37880477 -51624076 + MIR SINE MIR 17 77 -185 227 267 122 76 chr17 37880480 37880611 -51623942 + MIR SINE MIR 44 180 -82 26 0 0 0 chr17 37880909 37880935 -51623618 + AT_rich Low_complexity Low_complexity 1 26 0 187 278 42 0 chr17 37881696 37881768 -51622785 + MIR SINE MIR 132 206 -56 1744 124 0 29 chr17 37881978 37882252 -51622301 + AluSx SINE Alu 30 295 -17 430 317 94 0 chr17 37882373 37882553 -51622000 - MIR SINE MIR -3 259 63 310 289 104 39 chr17 37882610 37882967 -51621586 - L1ME4a LINE L1 -167 5954 5575 687 254 94 9 chr17 37883039 37883263 -51621290 - MIR SINE MIR -11 251 9 345 290 97 77 chr17 37884158 37884528 -51620025 - L1ME4a LINE L1 -23 6098 5714 1063 214 41 23 chr17 37884528 37884748 -51619805 - MER58A DNA MER1_type 0 224 1 345 290 97 77 chr17 37884748 37884894 -51619659 - L1ME4a LINE L1 -407 5714 5572 346 217 108 0 chr17 37885195 37885225 -51619328 - L1MA9 LINE L1 0 6312 6283 551 299 62 75 chr17 37885225 37885281 -51619272 - L1MD2 LINE L1 -216 6143 6088 3929 167 57 25 chr17 37885281 37886475 -51618078 - L1MA9 LINE L1 -198 6114 4873 293 67 39 0 chr17 37886480 37886537 -51618016 - MER41A LTR ERV1 -76 478 418 311 227 0 0 chr17 37886537 37886603 -51617950 - L1MD2 LINE L1 -1261 4885 4820 2752 19 0 0 chr17 37886613 37886924 -51617629 - AluYb8 SINE Alu -7 311 1 444 310 14 7 chr17 37886924 37887069 -51617484 - MIR SINE MIR -97 165 20 556 217 17 0 chr17 37887079 37887199 -51617354 - MER20 DNA MER1_type 0 219 98 403 286 41 14 chr17 37887222 37887369 -51617184 - MIR SINE MIR -65 197 47 1756 169 3 7 chr17 37888293 37888600 -51615953 + AluJo SINE Alu 1 306 -6 309 276 24 16 chr17 37890740 37890867 -51613686 - MER113 DNA MER1_type? -380 141 14 367 287 0 41 chr17 37891285 37891407 -51613146 + L2 LINE L2 2458 2574 -740 524 248 29 105 chr17 37892295 37892467 -51612086 + L1MD3 LINE L1 7705 7844 -151 1664 157 0 27 chr17 37892467 37892766 -51611787 - AluJo SINE Alu -21 291 1 524 248 29 105 chr17 37892766 37892908 -51611645 + L1MD3 LINE L1 7844 7995 0 979 325 37 11 chr17 37898042 37898709 -51605844 - L1MC4 LINE L1 -1629 6156 5479 182 272 48 96 chr17 37903324 37903449 -51601104 - MIR SINE MIR -72 136 18 * 246 313 82 61 chr17 37903429 37903576 -51600977 + MIR SINE MIR 94 243 -19 1876 186 21 3 chr17 37904611 37904949 -51599604 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 37905028 37905053 -51599500 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 702 165 133 19 chr17 37905399 37905557 -51598996 - THE1C LTR MaLR 0 375 200 1872 89 4 0 chr17 37905559 37905807 -51598746 - AluSx SINE Alu -63 249 1 2149 90 3 23 chr17 37905814 37906124 -51598429 - AluSx SINE Alu -3 309 6 2223 90 13 0 chr17 37906137 37906438 -51598115 - AluSg SINE Alu -5 305 1 1088 137 12 0 chr17 37906794 37906962 -51597591 - AluSq SINE Alu -143 170 1 1072 221 42 35 chr17 37906963 37907252 -51597301 - L1MDa LINE L1 -6248 292 2 964 223 130 32 chr17 37907267 37907465 -51597088 - L1MEc LINE L1 -3019 3196 3019 194 62 31 0 chr17 37907465 37907497 -51597056 + (TTATG)n Simple_repeat Simple_repeat 4 36 0 1994 114 0 0 chr17 37907497 37907778 -51596775 - AluSg1 SINE Alu -28 281 1 964 223 130 32 chr17 37907778 37908084 -51596469 - L1MEc LINE L1 -3195 3020 2641 1954 119 0 0 chr17 37908084 37908361 -51596192 - AluSx SINE Alu -35 277 1 745 196 21 21 chr17 37908361 37908504 -51596049 - AluJo SINE Alu -168 144 2 634 279 18 14 chr17 37908509 37908794 -51595759 - L1MEc LINE L1 -3576 2639 2355 1207 190 62 65 chr17 37908852 37908996 -51595557 - AluJb SINE Alu -13 289 146 2227 87 7 0 chr17 37908996 37909295 -51595258 - AluSp SINE Alu -12 301 1 221 0 35 0 chr17 37909303 37909332 -51595221 + (TG)n Simple_repeat Simple_repeat 1 30 0 1207 190 62 65 chr17 37909332 37909468 -51595085 - AluJb SINE Alu -163 139 1 304 333 52 33 chr17 37909497 37909650 -51594903 - L1MEc LINE L1 -5028 1368 1213 2192 267 65 42 chr17 37909658 37910751 -51593802 - L1MEc LINE L1 -5235 1161 44 * 2261 224 121 57 chr17 37910747 37910994 -51593559 - L1ME LINE L1 -713 5520 5290 2198 33 44 0 chr17 37910994 37911313 -51593240 - AluY SINE Alu 0 331 1 2261 224 121 57 chr17 37911313 37912044 -51592509 - L1ME LINE L1 -943 5290 4422 1776 139 42 0 chr17 37912044 37912332 -51592221 - AluSx SINE Alu -12 300 1 2261 224 121 57 chr17 37912332 37912716 -51591837 - L1ME LINE L1 -1811 4422 4064 569 259 22 0 chr17 37912719 37912854 -51591699 - MER74A LTR ERVL 0 558 421 428 231 70 0 chr17 37912864 37913007 -51591546 - L1ME LINE L1 -2169 4046 3894 198 0 0 0 chr17 37913028 37913050 -51591503 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1366 130 49 37 chr17 37913060 37913306 -51591247 - AluSx SINE Alu -63 249 1 1001 274 95 39 chr17 37913309 37913848 -51590705 - L1ME LINE L1 -2365 3850 3260 4084 137 21 6 chr17 37913848 37914474 -51590079 - MER41B LTR ERV1 0 635 1 1001 274 95 39 chr17 37914474 37914649 -51589904 - L1ME LINE L1 -2955 3260 3096 608 48 24 0 chr17 37914649 37914732 -51589821 + (CATTT)n Simple_repeat Simple_repeat 3 87 0 1871 138 0 17 chr17 37914732 37915028 -51589525 - AluSx SINE Alu -21 291 1 604 256 170 28 chr17 37915033 37915428 -51589125 - L1ME LINE L1 -3320 2895 2445 1797 146 0 23 chr17 37915445 37915767 -51588786 - AluSx SINE Alu 0 312 1 241 302 52 0 chr17 37915768 37915884 -51588669 - L1ME LINE L1 -4003 2393 2272 2438 207 86 7 chr17 37915889 37916492 -51588061 - L1MB7 LINE L1 -108 6076 5426 2110 104 0 16 chr17 37916492 37916809 -51587744 - AluSx SINE Alu 0 312 1 1117 234 86 16 chr17 37916809 37917180 -51587373 - L1MB7 LINE L1 -814 5332 4936 1217 287 90 41 chr17 37917237 37918058 -51586495 - L1ME LINE L1 -4371 2025 1149 2216 94 7 3 chr17 37918058 37918365 -51586188 - AluSp SINE Alu -5 308 1 1217 287 90 41 chr17 37918365 37918498 -51586055 - L1ME LINE L1 -5247 1149 1024 311 130 0 0 chr17 37918498 37918552 -51586001 - Alu SINE Alu 0 300 247 1806 187 24 3 chr17 37919371 37919708 -51584845 - MER2 DNA MER2_type 0 344 1 330 26 0 0 chr17 37920027 37920066 -51584487 + (CTGGGG)n Simple_repeat Simple_repeat 3 41 0 1529 165 109 26 chr17 37920171 37920511 -51584042 - THE1C LTR MaLR -1 374 7 258 116 0 0 chr17 37921324 37921367 -51583186 + (CCCCCA)n Simple_repeat Simple_repeat 4 46 0 272 231 20 7 chr17 37921693 37921840 -51582713 + GA-rich Low_complexity Low_complexity 2 150 0 540 254 0 0 chr17 37922355 37922532 -51582021 + (TG)n Simple_repeat Simple_repeat 1 177 0 3198 146 0 8 chr17 37922747 37923235 -51581318 - MER1A DNA MER1_type 0 529 46 900 167 15 128 chr17 37923426 37923630 -51580923 - MLT1C LTR MaLR 0 467 210 225 170 64 0 chr17 37923630 37923677 -51580876 + MLT-int LTR MaLR 142 191 -1544 180 0 0 0 chr17 37924312 37924332 -51580221 + (TG)n Simple_repeat Simple_repeat 1 20 0 16927 68 14 1 chr17 37925650 37927722 -51576831 + HERVL LTR ERVL 2659 4757 -897 505 269 62 40 chr17 37927735 37927962 -51576591 - L1MC4a LINE L1 -227 5935 5702 287 143 0 0 chr17 37928013 37928062 -51576491 + L1M4 LINE L1 5238 5286 -860 1540 176 21 0 chr17 37928065 37928355 -51576198 + AluJb SINE Alu 2 297 -15 1381 124 0 0 chr17 37928465 37928659 -51575894 + AluSx SINE Alu 2 195 -117 628 213 22 7 chr17 37928670 37928806 -51575747 - MLT1C LTR MaLR -203 162 25 284 132 19 0 chr17 37928816 37928869 -51575684 + L1 LINE L1 5188 5241 -905 205 154 0 0 chr17 37928897 37928903 -51575650 + (TA)n Simple_repeat Simple_repeat 1 6 -33 1662 185 0 3 chr17 37928903 37929195 -51575358 + AluJb SINE Alu 1 291 -21 205 154 0 0 chr17 37929195 37929227 -51575326 + (TA)n Simple_repeat Simple_repeat 5 39 0 314 259 33 41 chr17 37929229 37929350 -51575203 + L1MC3 LINE L1 6550 6703 -1137 1101 92 0 29 chr17 37929356 37929530 -51575023 - Tigger7 DNA MER2_type -26 2461 2293 1405 99 0 0 chr17 37929533 37929725 -51574828 - AluSg/x SINE Alu -19 291 100 391 101 55 18 chr17 37930079 37930185 -51574368 + MLT2A1 LTR ERVL 198 400 -44 356 184 38 6 chr17 37930212 37930370 -51574183 + (TA)n Simple_repeat Simple_repeat 2 164 0 334 121 0 45 chr17 37930373 37930439 -51574114 + MLT2B1 LTR ERVL 458 520 0 10945 205 23 35 chr17 37930440 37932659 -51571894 + ERVL-B1 LTR ERVL 2 2194 -3570 371 121 0 17 chr17 37932821 37932879 -51571674 + MER66B LTR ERV1 291 347 -139 879 137 0 27 chr17 37932918 37933064 -51571489 + AluJo SINE Alu 1 142 -170 1835 73 4 0 chr17 37933066 37933298 -51571255 + AluSc SINE Alu 1 233 -76 243 0 0 0 chr17 37933314 37933341 -51571212 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2120 84 17 27 chr17 37933342 37933641 -51570912 + AluSp SINE Alu 1 296 -17 1982 93 44 0 chr17 37934194 37934488 -51570065 + AluSg SINE Alu 1 306 0 209 291 89 0 chr17 37934511 37934590 -51569963 + MIR SINE MIR 109 194 -68 1425 175 49 3 chr17 37935280 37935565 -51568988 - AluJb SINE Alu -14 298 1 2220 62 31 0 chr17 37936572 37936862 -51567691 + AluSx SINE Alu 1 299 -13 1043 121 0 6 chr17 37936909 37937074 -51567479 + AluSc SINE Alu 135 298 -11 505 297 8 0 chr17 37937155 37937273 -51567280 - MIR SINE MIR -134 128 10 185 143 0 0 chr17 37937776 37937804 -51566749 + MIR SINE MIR 116 143 -65 464 182 83 55 chr17 37938173 37938354 -51566199 + MER53 DNA DNA 3 188 -1 405 321 89 21 chr17 37938507 37938697 -51565856 + L2 LINE L2 1462 1664 -1650 231 175 0 0 chr17 37940000 37940057 -51564496 + (TG)n Simple_repeat Simple_repeat 1 57 0 460 305 83 36 chr17 37940704 37941006 -51563547 - LTR40b LTR ERVL -2 460 145 2466 214 90 84 chr17 37941123 37941264 -51563289 - L1MD3 LINE L1 -5 8037 7898 225 0 0 0 chr17 37941264 37941289 -51563264 + (TC)n Simple_repeat Simple_repeat 2 26 0 2466 214 90 84 chr17 37941289 37942172 -51562381 - L1MD3 LINE L1 -144 7898 7024 1980 120 3 10 chr17 37942296 37942596 -51561957 - AluSc SINE Alu -11 298 1 2009 98 7 11 chr17 37942599 37942922 -51561631 - AluSx SINE Alu 0 322 1 1935 116 3 10 chr17 37942927 37943219 -51561334 - AluSc SINE Alu -19 290 1 2240 97 0 0 chr17 37943220 37943520 -51561033 - AluSg SINE Alu -10 300 1 1306 81 0 6 chr17 37943698 37943870 -51560683 - AluSq SINE Alu -142 171 1 2034 139 3 0 chr17 37943939 37944249 -51560304 - AluSx SINE Alu -1 311 1 2314 69 7 0 chr17 37944488 37944792 -51559761 + AluY SINE Alu 1 306 -5 1822 130 4 0 chr17 37944903 37945172 -51559381 + AluSx SINE Alu 9 278 -34 28 61 0 0 chr17 37945389 37945438 -51559115 + AT_rich Low_complexity Low_complexity 1 49 0 802 168 8 0 chr17 37945443 37945574 -51558979 - FLAM_C SINE Alu -1 132 1 2186 100 0 3 chr17 37945605 37945906 -51558647 + AluSq SINE Alu 1 300 -13 2128 113 0 7 chr17 37945918 37946228 -51558325 + AluSp SINE Alu 6 313 0 2107 99 7 10 chr17 37946474 37946777 -51557776 + AluSc SINE Alu 1 302 -7 672 149 0 9 chr17 37947036 37947143 -51557410 - L1PB3 LINE L1 -48 6106 6001 2129 119 3 3 chr17 37947380 37947692 -51556861 - AluSx SINE Alu 0 312 1 2092 89 25 0 chr17 37947900 37948180 -51556373 - AluSg SINE Alu -23 287 1 311 311 45 30 chr17 37948215 37948347 -51556206 - MIR3 SINE MIR -72 136 3 2189 109 0 0 chr17 37949479 37949781 -51554772 - AluSg SINE Alu -8 302 1 2354 68 0 3 chr17 37949787 37950083 -51554470 - AluSc SINE Alu -14 295 1 1597 170 3 7 chr17 37950240 37950523 -51554030 + AluJo SINE Alu 1 282 -30 2069 134 0 0 chr17 37950906 37951211 -51553342 - AluSx SINE Alu -7 305 1 2202 89 7 0 chr17 37951315 37951619 -51552934 - AluY SINE Alu -5 306 1 2023 60 4 23 chr17 37951959 37952224 -51552329 - AluSp SINE Alu -24 289 30 871 71 0 9 chr17 37952245 37952357 -51552196 - AluY SINE Alu -179 132 22 1451 180 9 75 chr17 37952366 37952552 -51552001 - AluJb SINE Alu 0 312 156 1993 142 3 0 chr17 37952552 37952863 -51551690 - AluSx SINE Alu 0 312 1 1451 180 9 75 chr17 37952863 37953010 -51551543 - AluJb SINE Alu -156 156 1 350 146 0 0 chr17 37953011 37953066 -51551487 - MER53 DNA DNA -134 55 1 1973 94 7 46 chr17 37953087 37953256 -51551297 - AluSq SINE Alu -18 295 142 2352 71 0 0 chr17 37953256 37953550 -51551003 - AluSq SINE Alu -19 294 1 1973 94 7 46 chr17 37953550 37953687 -51550866 - AluSq SINE Alu -171 142 1 2195 88 0 44 chr17 37953697 37953869 -51550684 - AluSq SINE Alu -8 305 152 1998 93 0 59 chr17 37953869 37954190 -51550363 - AluY SINE Alu -9 302 1 2195 88 0 44 chr17 37954190 37954334 -51550219 - AluSq SINE Alu -161 152 3 2061 93 0 55 chr17 37954919 37955063 -51549490 + AluSx SINE Alu 4 123 -189 2109 97 10 0 chr17 37955063 37955353 -51549200 + AluY SINE Alu 1 293 -18 2061 93 0 55 chr17 37955353 37955520 -51549033 + AluSx SINE Alu 123 298 -14 1896 95 0 89 chr17 37955527 37955843 -51548710 + AluSg SINE Alu 1 288 -22 717 162 17 0 chr17 37955950 37956067 -51548486 - FLAM_A SINE Alu -13 129 11 353 224 15 8 chr17 37956462 37956563 -51547990 + MIR3 SINE MIR 106 207 -1 623 258 0 0 chr17 37956653 37956785 -51547768 + FLAM_C SINE Alu 2 133 -10 2017 96 7 7 chr17 37956976 37957267 -51547286 - AluSg SINE Alu -19 291 1 1286 108 6 0 chr17 37957539 37957715 -51546838 + AluSx SINE Alu 1 177 -135 1376 41 0 6 chr17 37957815 37957984 -51546569 - AluY SINE Alu -142 169 2 516 158 30 0 chr17 37958015 37958116 -51546437 - MER53 DNA DNA -69 120 17 206 286 54 71 chr17 37959133 37959245 -51545308 + MIR SINE MIR 18 127 -81 1475 183 29 15 chr17 37959442 37959716 -51544837 + AluJb SINE Alu 1 278 -34 2145 93 4 4 chr17 37960209 37960488 -51544065 + AluSp SINE Alu 1 279 -34 2004 96 53 0 chr17 37961530 37961812 -51542741 + AluSx SINE Alu 2 298 -14 2267 109 0 7 chr17 37962946 37963248 -51541305 - AluSx SINE Alu -12 300 1 587 93 0 75 chr17 37963404 37963511 -51541042 + AluSg/x SINE Alu 211 309 0 709 325 109 10 chr17 37963511 37963660 -51540893 + L3 LINE CR1 1103 1236 -341 351 211 26 0 chr17 37963660 37963736 -51540817 + MER116 DNA Mariner 3 80 0 709 325 109 10 chr17 37963736 37963970 -51540583 + L3 LINE CR1 1236 1524 -53 38 0 0 20 chr17 37964121 37964133 -51540420 + AT_rich Low_complexity Low_complexity 1 12 -36 2322 104 0 0 chr17 37964133 37964441 -51540112 - AluSc SINE Alu -1 308 1 38 0 0 20 chr17 37964441 37964477 -51540076 + AT_rich Low_complexity Low_complexity 12 48 0 2206 93 3 3 chr17 37964477 37964766 -51539787 - AluSc SINE Alu -20 289 1 314 300 48 106 chr17 37964803 37965076 -51539477 + L2 LINE L2 3014 3270 -2 22 80 0 0 chr17 37965117 37965167 -51539386 + AT_rich Low_complexity Low_complexity 1 50 0 368 216 128 8 chr17 37965169 37965294 -51539259 + MER112 DNA MER1_type 119 258 -2 1349 140 14 27 chr17 37965526 37965747 -51538806 + AluJb SINE Alu 85 302 -10 762 197 15 8 chr17 37965761 37965893 -51538660 + FLAM_A SINE Alu 1 133 0 1991 97 6 84 chr17 37965916 37966236 -51538317 + AluSx SINE Alu 1 295 -17 2279 100 0 0 chr17 37966747 37967046 -51537507 - AluSx SINE Alu -13 299 1 1961 135 36 0 chr17 37967058 37967339 -51537214 - AluSq SINE Alu -22 291 1 309 284 32 81 chr17 37967713 37967872 -51536681 + MIR3 SINE MIR 8 153 -72 208 259 43 161 chr17 37968829 37968991 -51535562 - MIR SINE MIR -56 206 64 2401 72 13 3 chr17 37969120 37969424 -51535129 + AluSp SINE Alu 1 307 -6 684 26 0 0 chr17 37969426 37969503 -51535050 - AluY SINE Alu -24 287 211 227 284 236 47 chr17 37969611 37969738 -51534815 + L2 LINE L2 2876 3026 -287 2037 143 0 0 chr17 37969741 37970034 -51534519 - AluJb SINE Alu -13 299 7 2430 46 0 39 chr17 37970050 37970356 -51534197 - AluY SINE Alu -17 294 1 638 148 0 10 chr17 37970358 37970459 -51534094 - FLAM_C SINE Alu -6 137 38 2291 107 3 0 chr17 37970894 37971202 -51533351 - AluSp SINE Alu -4 309 1 2428 90 0 3 chr17 37971488 37971798 -51532755 + AluSp SINE Alu 1 309 -4 2356 57 0 0 chr17 37972239 37972546 -51532007 + AluY SINE Alu 1 307 0 790 232 81 10 chr17 37972599 37972765 -51531788 + MIR SINE MIR 41 225 -37 2369 92 0 16 chr17 37972765 37973080 -51531473 + AluSq SINE Alu 1 310 -3 790 232 81 10 chr17 37973080 37973111 -51531442 + MIR SINE MIR 225 252 -10 21 0 0 0 chr17 37973120 37973141 -51531412 + AT_rich Low_complexity Low_complexity 1 21 0 1081 88 0 0 chr17 37973142 37973278 -51531275 + AluSq SINE Alu 1 136 -176 282 184 0 0 chr17 37973278 37973354 -51531199 + A-rich Low_complexity Low_complexity 1 76 0 1347 96 6 0 chr17 37973354 37973532 -51531021 + AluSq SINE Alu 118 296 -17 22 39 0 39 chr17 37973568 37973590 -51530963 + AT_rich Low_complexity Low_complexity 1 22 -27 2145 120 3 0 chr17 37973590 37973882 -51530671 + AluSx SINE Alu 1 293 -19 22 39 0 39 chr17 37973882 37973910 -51530643 + AT_rich Low_complexity Low_complexity 22 49 0 1675 145 50 31 chr17 37974060 37974207 -51530346 + MER33 DNA MER1_type 2 145 -2440 2350 86 0 13 chr17 37974207 37974510 -51530043 - AluSq SINE Alu -14 299 1 1675 145 50 31 chr17 37974510 37974679 -51529874 + MER33 DNA MER1_type 145 324 0 945 146 32 25 chr17 37974817 37974975 -51529578 - AluJb SINE Alu -16 296 138 2300 92 7 0 chr17 37974983 37975275 -51529278 - AluSg SINE Alu -16 294 1 267 79 0 0 chr17 37975310 37975348 -51529205 + (TA)n Simple_repeat Simple_repeat 1 38 0 2265 62 0 21 chr17 37975485 37975804 -51528749 - AluSg SINE Alu 0 313 1 2703 30 0 0 chr17 37975913 37976217 -51528336 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 37976552 37976573 -51527980 + GC_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr17 37976620 37976650 -51527903 + GC_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 37976700 37976732 -51527821 + (TCCCC)n Simple_repeat Simple_repeat 1 32 0 217 228 11 43 chr17 37976880 37976972 -51527581 + CT-rich Low_complexity Low_complexity 1 89 0 510 119 0 0 chr17 37977272 37977356 -51527197 + (CTGGGG)n Simple_repeat Simple_repeat 6 89 0 2310 70 16 29 chr17 37977937 37978252 -51526301 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr17 37979353 37979379 -51525174 + AT_rich Low_complexity Low_complexity 1 26 0 2108 77 42 11 chr17 37979659 37979946 -51524607 - AluYa5 SINE Alu -14 297 2 5663 33 0 11 chr17 37979963 37980600 -51523953 - SVA Other Other 0 1386 757 1976 123 6 35 chr17 37980769 37981086 -51523467 - AluSc SINE Alu -1 308 1 237 65 0 0 chr17 37981331 37981362 -51523191 + (T)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr17 37981471 37981492 -51523061 + (TG)n Simple_repeat Simple_repeat 1 21 0 2367 108 0 0 chr17 37981545 37981851 -51522702 - AluSg SINE Alu -4 306 1 2089 105 6 54 chr17 37982136 37982451 -51522102 - AluSq SINE Alu -13 300 1 406 311 58 16 chr17 37982456 37982694 -51521859 + L1ME LINE L1 5443 5699 -463 2354 74 0 0 chr17 37982696 37983010 -51521543 - AluY SINE Alu 0 314 1 820 149 0 50 chr17 37983011 37983152 -51521401 - AluSq/x SINE Alu -177 136 3 944 198 0 0 chr17 37983321 37983483 -51521070 - AluSc SINE Alu -14 295 134 1942 140 30 0 chr17 37983485 37983785 -51520768 - AluSx SINE Alu -3 309 1 1498 176 48 31 chr17 37983787 37984076 -51520477 - AluJo SINE Alu -18 294 1 1818 166 0 14 chr17 37984339 37984628 -51519925 - AluJb SINE Alu -27 285 1 189 0 0 0 chr17 37984825 37984846 -51519707 + (TG)n Simple_repeat Simple_repeat 1 21 0 1754 140 23 20 chr17 37984914 37985214 -51519339 + AluJb SINE Alu 1 301 -11 1943 151 20 3 chr17 37985297 37985596 -51518957 - AluSx SINE Alu -6 306 3 2560 48 0 3 chr17 37985976 37986288 -51518265 - AluY SINE Alu 0 311 1 1525 179 10 36 chr17 37986431 37986739 -51517814 - AluJo SINE Alu -10 302 3 1612 172 3 20 chr17 37986897 37987200 -51517353 + AluSx SINE Alu 1 298 -14 326 271 143 14 chr17 37987249 37987389 -51517164 + MIR3 SINE MIR 34 191 -17 3138 159 104 18 chr17 37987640 37988256 -51516297 - L1MB8 LINE L1 -5 6173 5505 2246 109 0 22 chr17 37988265 37988577 -51515976 - AluSx SINE Alu -7 305 1 2297 98 3 0 chr17 37988766 37989061 -51515492 - AluSp SINE Alu -17 296 1 2143 125 3 7 chr17 37989721 37990024 -51514529 - AluSx SINE Alu -10 302 1 1825 168 3 3 chr17 37990245 37990543 -51514010 + AluSx SINE Alu 1 298 -14 1004 312 81 6 chr17 37990786 37991300 -51513253 + L1ME4a LINE L1 5320 5905 -216 30 27 0 0 chr17 37991436 37991473 -51513080 + AT_rich Low_complexity Low_complexity 1 37 0 2447 53 0 0 chr17 37991542 37991849 -51512704 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 37991972 37992000 -51512553 + AT_rich Low_complexity Low_complexity 1 28 0 1025 127 0 0 chr17 37992252 37992394 -51512159 + FLAM_C SINE Alu 1 142 -1 325 294 0 0 chr17 37992395 37992480 -51512073 - MLT1I LTR MaLR -245 164 80 1317 235 97 81 chr17 37992490 37992890 -51511663 + HAL1 LINE L1 853 1245 -1262 2074 126 0 10 chr17 37992890 37993192 -51511361 - AluSx SINE Alu -13 299 1 1317 235 97 81 chr17 37993192 37993592 -51510961 + HAL1 LINE L1 1245 1666 -841 870 192 28 0 chr17 37993675 37993852 -51510701 + AluJb SINE Alu 121 302 -10 246 250 157 24 chr17 37994039 37994371 -51510182 + L1M4 LINE L1 2784 3159 -2987 360 0 0 0 chr17 37994622 37994662 -51509891 + (CA)n Simple_repeat Simple_repeat 2 41 0 380 222 0 0 chr17 37994671 37994743 -51509810 - MIR SINE MIR -32 230 159 1443 190 10 60 chr17 37994744 37995044 -51509509 - AluJo SINE Alu -22 290 6 619 253 25 70 chr17 37995054 37995212 -51509341 - MIR SINE MIR -111 151 1 287 282 18 27 chr17 37995409 37995519 -51509034 - L1MC4a LINE L1 -1884 5924 5816 2424 58 0 14 chr17 37995740 37996031 -51508522 - AluY SINE Alu -24 287 1 1340 113 10 39 chr17 37996431 37996634 -51507919 + AluSg/x SINE Alu 97 293 -19 27 0 0 0 chr17 37997589 37997616 -51506937 + AT_rich Low_complexity Low_complexity 1 27 0 382 241 52 9 chr17 37997934 37998050 -51506503 + MARNA DNA Mariner 269 389 -197 2105 133 13 0 chr17 37998056 37998364 -51506189 + AluSx SINE Alu 1 312 0 25 31 0 0 chr17 37998653 37998685 -51505868 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 37998779 37998802 -51505751 + AT_rich Low_complexity Low_complexity 1 23 0 515 247 153 40 chr17 37999018 37999241 -51505312 + MIR SINE MIR 9 256 -6 333 0 0 0 chr17 38000069 38000106 -51504447 + (TG)n Simple_repeat Simple_repeat 2 38 0 204 125 0 0 chr17 38000106 38000138 -51504415 + (TA)n Simple_repeat Simple_repeat 2 33 0 1956 248 39 12 chr17 38000678 38001187 -51503366 + MER90 LTR ERV1 9 531 -44 318 302 50 96 chr17 38001209 38001510 -51503043 - HAL1b LINE L1 -854 494 208 339 25 0 0 chr17 38001831 38001871 -51502682 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2249 90 0 0 chr17 38001877 38002155 -51502398 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 38002479 38002509 -51502044 + AT_rich Low_complexity Low_complexity 1 30 0 957 135 0 0 chr17 38003175 38003308 -51501245 - FLAM_C SINE Alu 0 133 1 2102 162 0 0 chr17 38003462 38003771 -51500782 + AluSx SINE Alu 1 309 -3 1698 188 0 30 chr17 38003799 38004102 -51500451 + AluJo SINE Alu 1 294 -18 2167 114 0 20 chr17 38004104 38004402 -51500151 + AluSx SINE Alu 1 292 -20 2385 81 0 0 chr17 38004996 38005293 -51499260 - AluY SINE Alu -14 297 1 258 106 0 0 chr17 38006480 38006527 -51498026 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 2268 101 0 13 chr17 38008495 38008803 -51495750 + AluSq SINE Alu 1 304 -9 1279 189 3 106 chr17 38009149 38009471 -51495082 - AluSg1 SINE Alu -20 289 1 1544 198 3 35 chr17 38009501 38009789 -51494764 - AluJb SINE Alu -33 279 1 21 71 0 0 chr17 38009819 38009861 -51494692 + AT_rich Low_complexity Low_complexity 1 42 0 788 193 0 7 chr17 38010279 38010424 -51494129 + FRAM SINE Alu 2 145 -31 1291 116 0 0 chr17 38010472 38010644 -51493909 + AluSx SINE Alu 3 174 -138 354 109 0 0 chr17 38010650 38010705 -51493848 + AluSc SINE Alu 245 299 0 2256 74 10 7 chr17 38011327 38011623 -51492930 + AluSp SINE Alu 1 297 -16 970 58 0 0 chr17 38012761 38012882 -51491671 - AluSp SINE Alu -192 121 1 391 222 79 40 chr17 38012883 38013009 -51491544 - Charlie8 DNA MER1_type -2249 168 38 2203 99 0 10 chr17 38013474 38013786 -51490767 + AluSg SINE Alu 1 309 -1 206 233 0 96 chr17 38014333 38014406 -51490147 + MIR SINE MIR 187 252 -10 22 0 0 0 chr17 38015714 38015736 -51488817 + AT_rich Low_complexity Low_complexity 1 22 0 2249 86 13 0 chr17 38016315 38016617 -51487936 + AluSg SINE Alu 1 306 -4 2133 88 3 23 chr17 38016630 38016938 -51487615 + AluSx SINE Alu 6 307 -5 1859 89 4 0 chr17 38016945 38017193 -51487360 + AluSx SINE Alu 1 249 -63 745 146 152 38 chr17 38017195 38017353 -51487200 + THE1C LTR MaLR 200 375 0 183 80 0 0 chr17 38017699 38017724 -51486829 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1786 186 21 3 chr17 38017803 38018141 -51486412 + MER2 DNA MER2_type 1 344 0 227 313 82 61 chr17 38019176 38019323 -51485230 - MIR SINE MIR -19 243 94 181 264 48 96 chr17 38019303 38019428 -51485125 + MIR SINE MIR 18 136 -72 * 844 299 40 17 chr17 38024047 38024566 -51479987 + L1MC3 LINE L1 5484 6014 -1771 183 229 115 0 chr17 38029475 38029536 -51475017 + L2 LINE L2 2903 2970 -343 521 252 25 74 chr17 38029842 38029984 -51474569 - L1MD3 LINE L1 0 7995 7848 1621 157 0 27 chr17 38029984 38030283 -51474270 + AluJo SINE Alu 1 291 -21 521 252 25 74 chr17 38030283 38030454 -51474099 - L1MD3 LINE L1 -147 7848 7495 365 279 0 41 chr17 38031343 38031465 -51473088 - L2 LINE L2 -740 2574 2458 577 259 144 4 chr17 38031889 38032125 -51472428 + MER113 DNA MER1_type? 20 288 -233 566 200 25 8 chr17 38032187 38032307 -51472246 - MER20 DNA MER1_type 0 219 98 400 315 34 13 chr17 38032329 38032478 -51472075 - MIR SINE MIR -64 198 47 192 71 0 0 chr17 38033065 38033093 -51471460 + MIR SINE MIR 123 150 -112 914 198 78 21 chr17 38033508 38033750 -51470803 + L1ME3 LINE L1 5887 6142 -20 1535 186 3 10 chr17 38034037 38034348 -51470205 - AluJo SINE Alu -3 309 1 1595 165 0 4 chr17 38034957 38035223 -51469330 - AluJb SINE Alu -47 265 1 336 122 20 0 chr17 38035243 38035292 -51469261 - 5S rRNA rRNA -71 50 1 4666 136 61 35 chr17 38036557 38036570 -51467983 - L1MB4 LINE L1 -1 6179 6168 180 0 0 0 chr17 38036570 38036590 -51467963 + (TA)n Simple_repeat Simple_repeat 1 20 0 4666 136 61 35 chr17 38036590 38037606 -51466947 - L1MB4 LINE L1 -12 6168 5135 859 127 8 8 chr17 38038195 38038329 -51466224 - AluJo SINE Alu -178 134 1 2132 117 10 0 chr17 38038688 38038995 -51465558 + AluSx SINE Alu 3 312 0 31 0 0 0 chr17 38039062 38039093 -51465460 + AT_rich Low_complexity Low_complexity 1 31 0 32 43 0 0 chr17 38039242 38039288 -51465265 + AT_rich Low_complexity Low_complexity 1 46 0 983 169 0 18 chr17 38039300 38039466 -51465087 + FRAM SINE Alu 4 166 0 2150 107 0 13 chr17 38039599 38039909 -51464644 + AluSx SINE Alu 1 306 -6 982 185 5 11 chr17 38040117 38040301 -51464252 - Tigger6 DNA MER2_type -1 1596 1414 749 177 0 0 chr17 38040611 38040724 -51463829 + Tigger3(Golem) DNA MER2_type 1 113 -2916 262 116 43 58 chr17 38040752 38040821 -51463732 + Tigger3(Golem) DNA MER2_type 269 336 -2693 1963 122 0 34 chr17 38040894 38041224 -51463329 - AluSx SINE Alu 0 320 1 240 35 0 0 chr17 38041224 38041253 -51463300 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 375 105 35 0 chr17 38041254 38041311 -51463242 - AluJo SINE Alu -20 282 224 887 151 0 0 chr17 38041312 38041451 -51463102 - AluJo SINE Alu -173 139 1 477 268 53 14 chr17 38041496 38041705 -51462848 - L1ME4a LINE L1 -202 5919 5703 287 143 0 0 chr17 38041755 38041804 -51462749 + L1M4 LINE L1 5238 5286 -860 1555 172 21 0 chr17 38041807 38042097 -51462456 + AluJb SINE Alu 2 297 -15 1389 119 0 0 chr17 38042206 38042400 -51462153 + AluSx SINE Alu 2 195 -117 628 213 22 7 chr17 38042411 38042547 -51462006 - MLT1A1 LTR MaLR -203 162 25 276 120 20 0 chr17 38042557 38042607 -51461946 + L1 LINE L1 5188 5238 -908 213 125 0 0 chr17 38042638 38042644 -51461909 + (TA)n Simple_repeat Simple_repeat 2 7 -34 1673 186 0 3 chr17 38042644 38042939 -51461614 + AluJb SINE Alu 1 294 -18 213 125 0 0 chr17 38042939 38042972 -51461581 + (TA)n Simple_repeat Simple_repeat 6 41 0 314 258 43 34 chr17 38042977 38043096 -51461457 + L1MC3 LINE L1 6550 6691 -1137 1426 125 64 46 chr17 38043104 38043281 -51461272 - MER44D DNA MER2_type -1908 583 411 2156 96 0 0 chr17 38043281 38043572 -51460981 - AluSg SINE Alu -19 291 1 1426 125 64 46 chr17 38043572 38043674 -51460879 - MER44D DNA MER2_type -2080 411 29 4108 147 22 52 chr17 38043691 38043830 -51460723 + L1MB8 LINE L1 5240 5382 -796 1795 169 7 0 chr17 38043830 38044138 -51460415 + AluSx SINE Alu 1 310 -2 4108 147 22 52 chr17 38044138 38044185 -51460368 + L1MB8 LINE L1 5382 5429 -749 1584 188 41 54 chr17 38044185 38044553 -51460000 - MLT1A1 LTR MaLR 0 365 3 4108 147 22 52 chr17 38044553 38044906 -51459647 + L1MB8 LINE L1 5429 5741 -437 1794 139 45 0 chr17 38044906 38045194 -51459359 + AluSx SINE Alu 1 301 -11 4108 147 22 52 chr17 38045194 38045517 -51459036 + L1MB8 LINE L1 5741 6072 -106 2266 88 7 0 chr17 38045517 38045825 -51458728 + AluSx SINE Alu 1 310 -2 1828 158 3 0 chr17 38046102 38046394 -51458159 - AluJb SINE Alu -19 293 1 22 0 0 0 chr17 38046678 38046700 -51457853 + AT_rich Low_complexity Low_complexity 1 22 0 1541 188 28 3 chr17 38046703 38046990 -51457563 - AluSx SINE Alu -11 301 8 1810 113 0 0 chr17 38047047 38047295 -51457258 + AluSq SINE Alu 1 248 -65 195 318 19 75 chr17 38047488 38047595 -51456958 - L2 LINE L2 -14 3299 3199 1224 126 0 0 chr17 38047654 38047836 -51456717 + AluSg/x SINE Alu 130 311 -1 3436 140 29 8 chr17 38047984 38048667 -51455886 + L1MA4A LINE L1 5163 5857 -446 308 106 0 0 chr17 38048784 38048831 -51455722 + AluSq SINE Alu 252 298 -4 700 157 0 0 chr17 38049696 38049804 -51454749 + Tigger2a DNA MER2_type 1 108 -326 1498 104 14 0 chr17 38049904 38050115 -51454438 + AluSg/x SINE Alu 88 301 -9 673 294 91 5 chr17 38050544 38050765 -51453788 + MIR SINE MIR 13 252 -10 865 206 0 0 chr17 38050908 38051073 -51453480 + FRAM SINE Alu 1 161 -15 1532 186 0 0 chr17 38051128 38051418 -51453135 - AluSq SINE Alu -23 290 1 620 221 0 26 chr17 38051523 38051708 -51452845 + AluY SINE Alu 132 312 0 1748 170 3 0 chr17 38051750 38052033 -51452520 + AluJo SINE Alu 3 286 -26 374 196 21 7 chr17 38052033 38052176 -51452377 + (TA)n Simple_repeat Simple_repeat 1 145 0 351 262 19 58 chr17 38052177 38052280 -51452273 + L2 LINE L2 3174 3272 0 205 342 68 75 chr17 38052296 38052457 -51452096 + L2 LINE L2 2924 3083 -189 297 122 0 0 chr17 38052887 38052928 -51451625 - Alu SINE Alu -262 41 1 248 272 33 22 chr17 38052930 38053022 -51451531 - L1MC/D LINE L1 -2145 5663 5571 1429 175 4 11 chr17 38053024 38053293 -51451260 - AluJb SINE Alu -12 300 34 2158 80 0 7 chr17 38053418 38053728 -51450825 + AluY SINE Alu 1 308 0 2106 103 7 3 chr17 38053793 38054093 -51450460 + AluSq SINE Alu 1 301 -12 181 204 91 0 chr17 38054494 38054538 -51450015 + MIR SINE MIR 200 247 -15 29 70 0 0 chr17 38054541 38054598 -51449955 + AT_rich Low_complexity Low_complexity 1 57 0 277 292 142 26 chr17 38054598 38054711 -51449842 - MIR SINE MIR -105 157 32 1868 141 3 3 chr17 38055027 38055352 -51449201 + AluSx SINE Alu 1 312 0 591 159 0 0 chr17 38055585 38055673 -51448880 - AluJ/FLAM SINE Alu -223 89 2 431 267 95 70 chr17 38055720 38055854 -51448699 + L1ME4a LINE L1 5554 5683 -438 2160 109 3 0 chr17 38055854 38056156 -51448397 + AluSp SINE Alu 1 303 -10 431 267 95 70 chr17 38056156 38056177 -51448376 + L1ME4a LINE L1 5683 5702 -419 1817 111 52 0 chr17 38056177 38056491 -51448062 + AluSq SINE Alu 1 328 0 431 267 95 70 chr17 38056491 38056618 -51447935 + L1ME4a LINE L1 5702 5845 -276 1418 144 134 25 chr17 38056619 38056896 -51447657 + AluJb SINE Alu 1 307 -5 476 277 66 15 chr17 38056933 38057070 -51447483 - MIR SINE MIR -71 191 48 2139 89 0 3 chr17 38057078 38057369 -51447184 - AluSg SINE Alu -15 295 6 5556 209 42 39 chr17 38059695 38060989 -51443564 - L1 LINE L1 -3413 3754 2466 2049 154 0 0 chr17 38060989 38061295 -51443258 - AluSx SINE Alu -3 309 4 5556 209 42 39 chr17 38061295 38061570 -51442983 - L1 LINE L1 -4701 2466 2193 1953 162 0 13 chr17 38061570 38061885 -51442668 + AluJo SINE Alu 1 311 -1 5556 209 42 39 chr17 38061885 38062587 -51441966 - L1 LINE L1 -4974 2193 1259 207 204 23 0 chr17 38062632 38062676 -51441877 - MIR SINE MIR -144 118 74 324 0 0 0 chr17 38062705 38062741 -51441812 + (TA)n Simple_repeat Simple_repeat 2 37 0 1552 103 4 39 chr17 38062741 38062965 -51441588 - AluJo SINE Alu -9 303 86 290 240 27 13 chr17 38063950 38064025 -51440528 - MLT1K LTR MaLR -4 584 509 210 109 22 22 chr17 38064938 38064984 -51439569 + T-rich Low_complexity Low_complexity 1 46 0 186 43 0 0 chr17 38065882 38065905 -51438648 + (GA)n Simple_repeat Simple_repeat 2 24 0 3691 56 9 21 chr17 38067153 38067640 -51436913 + L1PA8A LINE L1 5667 6147 0 181 0 0 0 chr17 38067620 38067660 -51436893 + (CAA)n Simple_repeat Simple_repeat 2 41 0 325 295 133 0 chr17 38067899 38068004 -51436549 + MER5B DNA MER1_type 59 177 -1 1877 127 0 0 chr17 38070202 38070461 -51434092 - AluSx SINE Alu -5 307 49 607 254 44 16 chr17 38070461 38070665 -51433888 + MER51A LTR ERV1 1 336 -304 225 250 40 26 chr17 38070738 38070814 -51433739 + MER51C LTR ERV1 355 431 -209 2113 124 3 0 chr17 38070829 38071127 -51433426 - AluSq SINE Alu -14 299 1 830 204 115 5 chr17 38071151 38071342 -51433211 + MER51C LTR ERV1 429 640 0 231 146 125 0 chr17 38071342 38071388 -51433165 - AluSx SINE Alu -250 52 1 2089 106 10 10 chr17 38071478 38071797 -51432756 + AluSc SINE Alu 1 309 0 222 342 70 26 chr17 38072136 38072250 -51432303 + L2 LINE L2 3122 3240 -32 2075 89 38 3 chr17 38073567 38073858 -51430695 + AluSc SINE Alu 3 303 -6 1451 198 0 14 chr17 38073933 38074211 -51430342 + AluJb SINE Alu 1 274 -38 1792 114 0 0 chr17 38074317 38074553 -51430000 - AluSq SINE Alu -76 237 2 27 49 0 0 chr17 38074563 38074604 -51429949 + AT_rich Low_complexity Low_complexity 1 41 0 2060 105 10 16 chr17 38074631 38074944 -51429609 - AluSx SINE Alu -1 311 1 1718 166 46 36 chr17 38075238 38075545 -51429008 - AluJb SINE Alu -2 310 1 230 325 152 26 chr17 38075959 38076011 -51428542 - L2 LINE L2 -5 3267 3223 2180 96 16 35 chr17 38076011 38076324 -51428229 + AluSq SINE Alu 1 307 -6 230 325 152 26 chr17 38076324 38076422 -51428131 - L2 LINE L2 -49 3223 3098 496 346 141 24 chr17 38076629 38077216 -51427337 - L2 LINE L2 -450 2864 2209 322 311 19 39 chr17 38077397 38077500 -51427053 + L2 LINE L2 3201 3301 -12 204 40 0 0 chr17 38077500 38077525 -51427028 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2298 81 7 3 chr17 38077766 38078061 -51426492 + AluSp SINE Alu 2 297 -16 1518 186 53 21 chr17 38078284 38078569 -51425984 - AluJb SINE Alu -18 294 1 189 0 0 0 chr17 38079343 38079364 -51425189 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2117 110 40 0 chr17 38079711 38080012 -51424541 + AluSq SINE Alu 1 313 0 2353 77 3 10 chr17 38081013 38081311 -51423242 - AluSc SINE Alu -13 296 1 22 35 0 0 chr17 38081355 38081384 -51423169 + AT_rich Low_complexity Low_complexity 1 29 0 1872 115 63 0 chr17 38081649 38081919 -51422634 - AluSx SINE Alu 0 312 26 239 86 0 0 chr17 38082536 38082571 -51421982 - AluSx SINE Alu -265 35 1 810 128 0 0 chr17 38082573 38082698 -51421855 + AluSp/q SINE Alu 185 309 -4 831 152 15 15 chr17 38082702 38082834 -51421719 + FLAM_C SINE Alu 2 133 0 23 0 0 0 chr17 38083119 38083142 -51421411 + AT_rich Low_complexity Low_complexity 1 23 0 517 246 185 10 chr17 38085580 38085775 -51418778 - MIR SINE MIR -20 242 14 341 286 161 10 chr17 38086181 38086380 -51418173 - MIR SINE MIR 0 262 34 2325 82 17 3 chr17 38086711 38087005 -51417548 - AluSx SINE Alu -14 298 1 2068 125 0 19 chr17 38087945 38088258 -51416295 - AluSq SINE Alu -6 307 1 711 84 0 0 chr17 38088260 38088355 -51416198 - AluSp/q SINE Alu -4 309 215 220 335 112 26 chr17 38089427 38089579 -51414974 - L3 LINE CR1 -63 1514 1350 32 0 0 0 chr17 38089579 38089611 -51414942 + AT_rich Low_complexity Low_complexity 1 32 0 2181 68 7 11 chr17 38089611 38089892 -51414661 - AluY SINE Alu -31 280 1 1001 96 0 15 chr17 38089892 38090028 -51414525 - AluY SINE Alu -177 134 1 21 0 0 0 chr17 38090028 38090049 -51414504 + AT_rich Low_complexity Low_complexity 1 21 0 236 258 65 129 chr17 38090169 38090293 -51414260 + L2 LINE L2 3142 3257 -15 1634 193 0 13 chr17 38092090 38092390 -51412163 - AluJo SINE Alu -16 296 1 2930 115 50 9 chr17 38092493 38092955 -51411598 - L1MA4 LINE L1 -6 6294 5814 898 74 25 8 chr17 38092968 38093090 -51411463 - BC200 scRNA scRNA -60 140 17 946 138 12 12 chr17 38093090 38093257 -51411296 - L1MA4 LINE L1 -472 5828 5662 * 9509 152 42 99 chr17 38093254 38093891 -51410662 - L1MA4 LINE L1 -791 5355 4683 1186 143 273 29 chr17 38093891 38094129 -51410424 - AluJb SINE Alu -6 296 1 9509 152 42 99 chr17 38094129 38094533 -51410020 - L1MA4 LINE L1 -1463 4683 4257 2460 87 0 0 chr17 38094533 38094843 -51409710 - AluSx SINE Alu -2 310 1 1013 132 0 0 chr17 38094845 38094989 -51409564 - AluJb SINE Alu -15 297 154 9509 152 42 99 chr17 38094989 38095360 -51409193 - L1MA4 LINE L1 -1890 4256 3865 221 0 35 0 chr17 38095360 38095389 -51409164 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2182 88 0 11 chr17 38095391 38095676 -51408877 - AluSc SINE Alu -27 282 1 9509 152 42 99 chr17 38095676 38096100 -51408453 - L1MA4 LINE L1 -2282 3864 3417 1931 191 116 16 chr17 38096100 38096488 -51408065 - MSTA LTR MaLR -1 427 1 9509 152 42 99 chr17 38096488 38097052 -51407501 - L1MA4 LINE L1 -2729 3417 2860 1444 174 71 0 chr17 38097153 38097435 -51407118 + AluJb SINE Alu 1 302 -10 280 222 0 0 chr17 38097435 38097489 -51407064 + L3 LINE CR1 1521 1574 -3 2223 84 16 42 chr17 38098201 38098509 -51406044 + AluSx SINE Alu 2 301 -11 328 240 240 10 chr17 38099740 38099844 -51404709 - L2 LINE L2 -5 3308 3181 351 288 63 78 chr17 38100077 38100252 -51404301 + L1ME LINE L1 5332 5503 -618 1641 137 49 53 chr17 38100252 38100562 -51403991 + AluJo SINE Alu 3 311 0 351 288 63 78 chr17 38100562 38100717 -51403836 + L1ME LINE L1 5503 5659 -462 1153 228 21 4 chr17 38101927 38102164 -51402389 + MLT1F LTR MaLR 11 251 -291 2228 113 3 0 chr17 38102522 38102814 -51401739 + AluSx SINE Alu 1 293 -19 2324 96 3 7 chr17 38103211 38103514 -51401039 + AluSx SINE Alu 1 302 -10 382 301 95 16 chr17 38103539 38103750 -51400803 + MIR SINE MIR 1 223 -39 527 82 0 14 chr17 38103986 38104059 -51400494 - L1MB8 LINE L1 -6 6172 6101 2448 157 83 9 chr17 38104061 38104351 -51400202 - L1M4 LINE L1 -408 5770 5503 2260 97 7 3 chr17 38104351 38104649 -51399904 - AluSg SINE Alu -11 299 1 2053 119 7 7 chr17 38104652 38104945 -51399608 - AluSx SINE Alu -19 293 1 2448 157 83 9 chr17 38104945 38105287 -51399266 - L1M4 LINE L1 -676 5502 5088 1630 163 64 11 chr17 38105508 38105791 -51398762 - AluJb SINE Alu -14 298 1 32 26 0 0 chr17 38105877 38105916 -51398637 + AT_rich Low_complexity Low_complexity 1 39 0 1726 191 10 3 chr17 38105990 38106289 -51398264 - AluJo SINE Alu -11 301 1 2190 128 0 3 chr17 38106389 38106695 -51397858 - AluSx SINE Alu -7 305 1 2291 180 81 57 chr17 38106886 38107548 -51397005 - L1MD3 LINE L1 -10 8002 7359 416 179 105 0 chr17 38107529 38107624 -51396929 - L1MC5 LINE L1 -853 7108 7004 * 687 112 10 0 chr17 38107721 38107848 -51396705 - AluSg/x SINE Alu 0 311 184 993 168 0 38 chr17 38107965 38108150 -51396403 + AluJb SINE Alu 130 307 -5 462 269 64 21 chr17 38108187 38108328 -51396225 - MIR SINE MIR -71 191 45 2308 86 3 0 chr17 38108332 38108623 -51395930 - AluSx SINE Alu -15 297 6 1987 133 0 23 chr17 38108631 38108794 -51395759 - AluSq SINE Alu -18 295 141 2228 115 0 3 chr17 38108794 38109106 -51395447 - AluY SINE Alu 0 311 1 1987 133 0 23 chr17 38109106 38109244 -51395309 - AluSq SINE Alu -172 141 1 937 217 165 29 chr17 38109431 38109813 -51394740 - L1MC4a LINE L1 -1640 6168 5735 662 284 12 12 chr17 38110093 38110262 -51394291 + MIR SINE MIR 34 202 -60 1642 131 45 24 chr17 38110956 38111246 -51393307 + AluJb SINE Alu 1 296 -16 188 354 35 42 chr17 38111548 38111692 -51392861 - L2 LINE L2 -926 2388 2246 637 219 67 49 chr17 38111730 38111781 -51392772 - MER5B DNA MER1_type -11 167 118 2096 110 7 3 chr17 38111781 38112090 -51392463 + AluSq SINE Alu 1 310 -3 637 219 67 49 chr17 38112090 38112202 -51392351 - MER5B DNA MER1_type -60 118 1 2009 117 3 13 chr17 38112932 38113230 -51391323 + AluSx SINE Alu 14 308 -4 1955 135 3 16 chr17 38113497 38113809 -51390744 + AluJb SINE Alu 1 308 -4 288 266 127 0 chr17 38114661 38114740 -51389813 + MIR SINE MIR 59 147 -115 194 91 30 0 chr17 38114786 38114819 -51389734 + (TG)n Simple_repeat Simple_repeat 2 35 0 2145 104 7 3 chr17 38115950 38116259 -51388294 + AluY SINE Alu 1 310 -1 22 56 0 0 chr17 38116403 38116439 -51388114 + AT_rich Low_complexity Low_complexity 1 36 0 2250 84 7 0 chr17 38116597 38116895 -51387658 + AluSp SINE Alu 1 300 -13 2425 56 0 7 chr17 38117190 38117494 -51387059 + AluY SINE Alu 1 302 -9 2115 115 0 0 chr17 38118154 38118459 -51386094 - AluSg SINE Alu 0 310 6 1732 137 13 47 chr17 38119814 38120114 -51384439 + AluSx SINE Alu 1 290 -22 254 233 0 0 chr17 38120127 38120187 -51384366 + AluJo SINE Alu 83 142 -160 2154 104 3 3 chr17 38120189 38120487 -51384066 + AluSc SINE Alu 1 298 -11 1582 189 4 0 chr17 38120501 38120782 -51383771 + AluJo SINE Alu 1 282 -30 261 0 0 0 chr17 38120785 38120814 -51383739 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 589 297 40 31 chr17 38120819 38120899 -51383654 + HAL1 LINE L1 1661 1739 -768 1985 125 3 23 chr17 38120899 38121203 -51383350 + AluSg SINE Alu 1 298 -12 589 297 40 31 chr17 38121203 38121344 -51383209 + HAL1 LINE L1 1739 1884 -623 2006 140 7 0 chr17 38121420 38121728 -51382825 - AluSx SINE Alu -2 310 1 210 37 0 0 chr17 38122274 38122301 -51382252 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2193 79 7 3 chr17 38123280 38123584 -51380969 + AluSq SINE Alu 1 305 -8 246 288 0 14 chr17 38124211 38124284 -51380269 + L2 LINE L2 3200 3271 -1 4480 99 26 2 chr17 38125623 38126248 -51378305 - MER51C LTR ERV1 0 640 1 400 112 26 0 chr17 38126248 38126324 -51378229 - MER51A LTR ERV1 -579 61 1 594 184 44 0 chr17 38126786 38126900 -51377653 - FLAM_A SINE Alu -11 131 13 350 169 51 0 chr17 38127164 38127223 -51377330 + AluJ/FLAM SINE Alu 1 62 -240 563 153 0 0 chr17 38127229 38127314 -51377239 - AluS SINE Alu -226 86 2 2077 110 0 16 chr17 38127623 38127931 -51376622 + AluSg SINE Alu 1 303 -7 1317 156 51 36 chr17 38128131 38128406 -51376147 - AluJo SINE Alu -33 279 1 3288 155 53 10 chr17 38128427 38129026 -51375527 - L1MB2 LINE L1 -7 6164 5540 1494 144 30 15 chr17 38129073 38129343 -51375210 + L1MA5 LINE L1 6027 6300 0 231 293 231 0 chr17 38129356 38129561 -51374992 - L1M4 LINE L1 -2108 4038 3882 4625 124 38 30 chr17 38129561 38130063 -51374490 - L1MA4 LINE L1 0 6300 5787 1935 143 7 0 chr17 38130063 38130371 -51374182 - AluJb SINE Alu -2 310 1 4625 124 38 30 chr17 38130371 38130701 -51373852 - L1MA4 LINE L1 -513 5787 5461 231 293 231 0 chr17 38130701 38130802 -51373751 - L1M4 LINE L1 -2264 3882 3661 2108 75 57 0 chr17 38131744 38132025 -51372528 + AluSx SINE Alu 1 297 -15 777 177 13 6 chr17 38132676 38132834 -51371719 - Charlie4 DNA MER1_type 0 1961 1803 874 206 65 32 chr17 38132858 38133105 -51371448 - Charlie4 DNA MER1_type -1705 256 2 1868 167 91 60 chr17 38133268 38133752 -51370801 + MLT1D LTR MaLR 5 503 -2 248 240 0 0 chr17 38134686 38134736 -51369817 + Alu SINE Alu 118 167 -141 1795 100 10 93 chr17 38134943 38135287 -51369266 - AluSx SINE Alu 0 319 2 726 255 222 5 chr17 38135287 38135675 -51368878 + L1ME4a LINE L1 5467 5938 -183 1761 143 10 27 chr17 38135853 38136154 -51368399 - AluJo SINE Alu -16 296 1 794 83 9 0 chr17 38136912 38137021 -51367532 - HY1 scRNA scRNA -1 111 2 642 293 71 4 chr17 38138471 38138696 -51365857 + MER112 DNA MER1_type 21 260 0 466 119 0 0 chr17 38138700 38138767 -51365786 - MER20 DNA MER1_type -4 215 149 * 1203 162 33 14 chr17 38138765 38138975 -51365578 + MER20 DNA MER1_type 6 219 0 1950 152 0 3 chr17 38138990 38139293 -51365260 + AluSx SINE Alu 1 302 -10 183 80 0 0 chr17 38139293 38139318 -51365235 + (GA)n Simple_repeat Simple_repeat 1 25 0 318 372 84 53 chr17 38139325 38140209 -51364344 - L2 LINE L2 -337 2977 2067 477 132 0 44 chr17 38140314 38140405 -51364148 + AluJ/FLAM SINE Alu 2 88 -224 823 131 16 0 chr17 38140506 38140628 -51363925 + AluJo SINE Alu 11 134 -178 1281 134 4 69 chr17 38141200 38141431 -51363122 - AluJb SINE Alu -12 300 85 328 151 0 0 chr17 38141637 38141690 -51362863 + Alu SINE Alu 242 294 -6 1568 181 19 29 chr17 38142992 38143306 -51361247 - AluJo SINE Alu -1 311 1 1948 127 21 0 chr17 38143332 38143623 -51360930 + AluSx SINE Alu 1 297 -15 1522 123 0 13 chr17 38144151 38144379 -51360174 - AluJb SINE Alu -7 305 81 610 222 4 126 chr17 38144415 38144654 -51359899 + AluJb SINE Alu 2 211 -101 794 170 75 6 chr17 38145479 38145638 -51358915 - MER45A DNA AcHobo 0 178 9 23 101 0 0 chr17 38146990 38147069 -51357484 + GC_rich Low_complexity Low_complexity 1 79 0 193 240 62 62 chr17 38147630 38147695 -51356858 + MIR SINE MIR 124 191 -71 2226 88 7 0 chr17 38147695 38147989 -51356564 + AluSx SINE Alu 1 296 -16 193 240 62 62 chr17 38147989 38148019 -51356534 + MIR SINE MIR 190 219 -43 395 285 173 32 chr17 38148835 38149183 -51355370 + L2 LINE L2 2635 3033 -239 1789 133 50 10 chr17 38149201 38149501 -51355052 - AluJb SINE Alu 0 312 1 1600 151 35 21 chr17 38150085 38150369 -51354184 - AluJb SINE Alu -24 288 1 510 211 32 87 chr17 38150624 38150703 -51353850 - MER5A DNA MER1_type -1 188 106 2551 27 0 0 chr17 38150703 38151000 -51353553 - AluY SINE Alu -14 297 1 510 211 32 87 chr17 38151000 38151105 -51353448 - MER5A DNA MER1_type -83 106 14 216 309 183 23 chr17 38151584 38151759 -51352794 + MIR SINE MIR 60 262 0 246 278 28 0 chr17 38151762 38151834 -51352719 - MER116 DNA Mariner -6 74 1 216 0 0 0 chr17 38152846 38152870 -51351683 + (TA)n Simple_repeat Simple_repeat 2 25 0 2365 63 0 3 chr17 38152923 38153224 -51351329 + AluY SINE Alu 1 300 -11 852 270 71 15 chr17 38153307 38153644 -51350909 - L1ME LINE L1 -376 5786 5431 2243 95 0 7 chr17 38153879 38154183 -51350370 + AluSx SINE Alu 1 302 -10 1112 140 0 0 chr17 38154189 38154353 -51350200 + FRAM SINE Alu 1 156 -20 636 163 52 7 chr17 38154504 38154639 -51349914 + Charlie4 DNA MER1_type 1821 1961 0 2122 89 0 0 chr17 38155245 38155576 -51348977 - AluSc SINE Alu 0 331 1 369 228 121 54 chr17 38156924 38157073 -51347480 + L1ME1 LINE L1 5708 5866 -300 24 0 0 0 chr17 38157222 38157246 -51347307 + AT_rich Low_complexity Low_complexity 1 24 0 1171 179 15 5 chr17 38157459 38157660 -51346893 - MER20 DNA MER1_type -16 203 1 2215 97 0 0 chr17 38157663 38157963 -51346590 + AluSq SINE Alu 1 300 -13 470 208 180 55 chr17 38159536 38159701 -51344852 + MER58C DNA MER1_type 2 194 -2226 1782 96 0 4 chr17 38159701 38159951 -51344602 + AluSg1 SINE Alu 1 249 -60 470 208 180 55 chr17 38159951 38159968 -51344585 + MER58C DNA MER1_type 194 207 -8 2120 96 0 17 chr17 38162150 38162443 -51342110 + AluSq SINE Alu 5 292 -21 353 322 92 99 chr17 38162760 38163033 -51341520 + L2 LINE L2 2989 3259 -13 531 110 0 0 chr17 38163731 38163804 -51340749 + AluS SINE Alu 2 74 -239 2525 62 0 0 chr17 38163807 38164116 -51340437 - AluY SINE Alu -2 309 1 883 166 0 75 chr17 38164634 38164692 -51339861 - AluJo SINE Alu -139 173 112 2184 94 3 0 chr17 38164692 38164989 -51339564 + AluSq SINE Alu 1 298 -15 883 166 0 75 chr17 38164989 38165117 -51339436 - AluJo SINE Alu -200 112 1 22 35 0 0 chr17 38166345 38166374 -51338179 + GC_rich Low_complexity Low_complexity 1 29 0 1504 152 97 0 chr17 38167726 38167995 -51336558 + AluJb SINE Alu 1 295 -17 1970 123 3 3 chr17 38168436 38168729 -51335824 - AluSx SINE Alu -19 293 1 32 0 0 0 chr17 38168729 38168761 -51335792 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 38169494 38169517 -51335036 + AT_rich Low_complexity Low_complexity 1 23 0 233 169 17 0 chr17 38169780 38169839 -51334714 + (CA)n Simple_repeat Simple_repeat 2 61 0 207 167 0 37 chr17 38170564 38170618 -51333935 + A-rich Low_complexity Low_complexity 2 53 0 2220 100 0 0 chr17 38172482 38172781 -51331772 - AluSx SINE Alu -13 299 1 2127 102 30 0 chr17 38176860 38177163 -51327390 - AluSx SINE Alu 0 312 1 219 219 0 0 chr17 38179548 38179589 -51324964 + GA-rich Low_complexity Low_complexity 2 42 0 761 222 42 0 chr17 38181249 38181416 -51323137 + MER5B DNA MER1_type 1 174 -4 2280 99 0 0 chr17 38181727 38182029 -51322524 - AluSc SINE Alu -7 302 1 368 194 16 0 chr17 38182050 38182112 -51322441 - AluJo SINE Alu -19 283 221 455 219 0 0 chr17 38182112 38182194 -51322359 - AluJo SINE Alu -124 188 107 618 163 0 0 chr17 38182294 38182386 -51322167 - AluJ/FLAM SINE Alu -220 92 1 868 186 12 12 chr17 38182435 38182602 -51321951 + AluJb SINE Alu 137 303 -9 349 262 255 0 chr17 38183982 38184131 -51320422 - MIR SINE MIR -1 261 75 644 267 78 11 chr17 38184962 38185153 -51319400 + MIR SINE MIR 47 250 -12 2069 116 0 28 chr17 38185389 38185708 -51318845 - AluSx SINE Alu -2 310 1 645 287 17 21 chr17 38185946 38186183 -51318370 + L1MC4 LINE L1 7807 8042 0 194 324 27 27 chr17 38186827 38186901 -51317652 + MIR SINE MIR 16 89 -119 423 216 153 60 chr17 38189922 38190190 -51314363 - L1ME4a LINE L1 -81 6040 5748 4744 188 112 64 chr17 38190235 38191452 -51313101 - L1MC4 LINE L1 -5 8037 6880 2031 121 0 3 chr17 38191452 38191741 -51312812 - AluSq SINE Alu -25 288 1 4744 188 112 64 chr17 38191741 38191840 -51312713 - L1MC4 LINE L1 -1162 6880 6787 523 26 40 0 chr17 38191840 38191916 -51312637 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 4744 188 112 64 chr17 38191916 38192060 -51312493 - L1MC4 LINE L1 -1255 6787 6506 1605 157 50 11 chr17 38192913 38193194 -51311359 + AluJo SINE Alu 1 292 -20 180 313 36 36 chr17 38194245 38194328 -51310225 + L2 LINE L2 3187 3269 -3 557 262 113 4 chr17 38194699 38194928 -51309625 + L1ME4a LINE L1 5690 5943 -178 312 224 51 31 chr17 38195344 38195442 -51309111 - Charlie8 DNA MER1_type -2196 221 122 2210 91 7 0 chr17 38196209 38196518 -51308035 - AluSp SINE Alu -2 311 1 2165 129 0 0 chr17 38197163 38197474 -51307079 + AluSx SINE Alu 1 311 -1 230 304 98 0 chr17 38197487 38197579 -51306974 - L1ME4a LINE L1 -543 5578 5478 405 0 0 0 chr17 38197880 38197925 -51306628 + (TG)n Simple_repeat Simple_repeat 2 46 0 326 157 0 0 chr17 38198575 38198626 -51305927 - MER66A LTR ERV1 -141 337 287 1865 138 3 16 chr17 38198722 38199026 -51305527 - AluJb SINE Alu -12 300 1 2302 82 13 0 chr17 38199589 38199895 -51304658 + AluSp SINE Alu 1 310 -3 1941 96 0 4 chr17 38200035 38200296 -51304257 + AluSx SINE Alu 1 260 -52 216 0 0 0 chr17 38200297 38200321 -51304232 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr17 38200585 38200606 -51303947 + AT_rich Low_complexity Low_complexity 1 21 0 1851 117 72 14 chr17 38202200 38202335 -51302218 + AluSx SINE Alu 1 127 -185 2355 77 0 0 chr17 38202335 38202633 -51301920 + AluSg SINE Alu 1 298 -12 1851 117 72 14 chr17 38202633 38202788 -51301765 + AluSx SINE Alu 127 308 -4 833 122 46 23 chr17 38203449 38203580 -51300973 - FLAM_C SINE Alu -8 135 2 680 197 0 0 chr17 38204401 38204523 -51300030 + FLAM_A SINE Alu 15 136 -6 1364 208 13 23 chr17 38204703 38205006 -51299547 - AluJo SINE Alu -12 300 1 1751 161 3 10 chr17 38205049 38205360 -51299193 - AluJb SINE Alu -3 309 1 375 311 12 37 chr17 38206341 38206505 -51298048 + MIR3 SINE MIR 47 206 -2 2004 123 127 51 chr17 38206906 38207320 -51297233 + MSTB1 LTR MaLR 1 429 -3 510 316 80 0 chr17 38207762 38207979 -51296574 - MIR SINE MIR -1 261 28 493 229 186 0 chr17 38208227 38208367 -51296186 - MIR SINE MIR -32 230 65 1337 218 31 3 chr17 38208603 38208892 -51295661 + AluJo SINE Alu 1 297 -15 2243 103 0 0 chr17 38208895 38209197 -51295356 + AluSx SINE Alu 2 303 -9 22 35 0 0 chr17 38209222 38209251 -51295302 + AT_rich Low_complexity Low_complexity 1 29 0 265 222 32 16 chr17 38210759 38210822 -51293731 - MIR SINE MIR -85 123 60 1335 122 109 0 chr17 38210846 38211067 -51293486 - AluSx SINE Alu -25 287 43 2321 99 7 0 chr17 38212442 38212735 -51291818 + AluSg SINE Alu 2 296 -14 1492 179 21 25 chr17 38212869 38213154 -51291399 - AluJb SINE Alu -28 284 1 1869 151 21 7 chr17 38213301 38213592 -51290961 - AluSx SINE Alu -17 295 1 2367 90 0 0 chr17 38213756 38214057 -51290496 - AluSx SINE Alu -11 301 1 1626 180 4 4 chr17 38214368 38214640 -51289913 - AluJb SINE Alu -19 293 22 2340 120 0 0 chr17 38214665 38214974 -51289579 - AluSc SINE Alu 0 309 1 2157 138 0 0 chr17 38214999 38215297 -51289256 - AluSx SINE Alu -14 298 1 1380 119 14 162 chr17 38215404 38215756 -51288797 - AluSp SINE Alu -13 300 1 443 273 96 38 chr17 38215833 38216042 -51288511 + MLT1J LTR MaLR 289 509 -2 219 266 33 14 chr17 38216513 38216617 -51287936 + MIR SINE MIR 46 151 -57 1682 71 0 0 chr17 38216619 38216829 -51287724 + L1PA8A LINE L1 5433 5642 -489 499 66 0 0 chr17 38266830 38266891 -51237662 - Alu SINE Alu -248 62 2 427 231 60 8 chr17 38266904 38267021 -51237532 + MIR SINE MIR 124 246 -16 201 294 0 0 chr17 38267023 38267115 -51237438 + (TAG)n Simple_repeat Simple_repeat 2 93 0 1548 168 88 15 chr17 38267161 38267435 -51237118 + AluJo SINE Alu 1 294 -18 485 251 6 0 chr17 38267435 38267602 -51236951 + (TAG)n Simple_repeat Simple_repeat 1 168 0 239 258 12 18 chr17 38267624 38267787 -51236766 + (TAG)n Simple_repeat Simple_repeat 3 164 0 360 300 38 35 chr17 38268573 38268750 -51235803 + MIR SINE MIR 42 262 0 258 238 14 86 chr17 38269608 38269752 -51234801 + MIR3 SINE MIR 56 189 -19 1233 246 113 54 chr17 38270713 38270743 -51233810 - L2 LINE L2 0 3313 3286 2103 106 31 7 chr17 38270743 38271036 -51233517 + AluSx SINE Alu 3 302 -10 1233 246 113 54 chr17 38271036 38271885 -51232668 - L2 LINE L2 -27 3286 2359 340 339 0 31 chr17 38272001 38272131 -51232422 + MIR SINE MIR 16 141 -121 387 0 0 0 chr17 38272137 38272180 -51232373 + (TG)n Simple_repeat Simple_repeat 1 43 0 2389 95 0 0 chr17 38272233 38272538 -51232015 + AluY SINE Alu 1 305 -6 2100 117 0 45 chr17 38272639 38272948 -51231605 - AluSx SINE Alu -17 295 1 532 284 49 0 chr17 38272952 38273114 -51231439 + MIR SINE MIR 91 260 -2 413 333 44 11 chr17 38273438 38273621 -51230932 - MIR3 SINE MIR -13 195 7 414 0 0 0 chr17 38274101 38274147 -51230406 + (TG)n Simple_repeat Simple_repeat 2 47 0 1651 54 0 5 chr17 38275328 38275531 -51229022 + L1PA8 LINE L1 5956 6157 -15 216 296 157 31 chr17 38275583 38275663 -51228890 - MIR SINE MIR -50 212 143 2028 165 3 0 chr17 38275663 38275972 -51228581 + AluJb SINE Alu 1 310 -2 216 296 157 31 chr17 38275972 38276050 -51228503 - MIR SINE MIR -119 143 34 312 102 0 0 chr17 38276252 38276301 -51228252 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1941 112 4 18 chr17 38276308 38276586 -51227967 - AluJb SINE Alu -38 274 1 338 349 38 0 chr17 38276830 38276962 -51227591 - MIR SINE MIR -108 154 18 2283 81 0 11 chr17 38277035 38277349 -51227204 - AluY SINE Alu 0 311 1 307 276 92 51 chr17 38277385 38277581 -51226972 + L1MC4a LINE L1 5948 6151 -1657 2026 154 19 6 chr17 38277589 38277953 -51226600 - L1MB3 LINE L1 -1 6182 5814 324 98 0 0 chr17 38277996 38278047 -51226506 - L1MB3 LINE L1 -349 5834 5784 311 264 58 11 chr17 38278047 38278134 -51226419 - L1MC4 LINE L1 -1348 6694 6604 2397 93 3 0 chr17 38278204 38278505 -51226048 + AluSq SINE Alu 1 302 -11 931 131 20 7 chr17 38278505 38278658 -51225895 - L1M3 LINE L1 -422 5749 5595 213 257 99 99 chr17 38278976 38279128 -51225425 + MIR SINE MIR 34 185 -77 573 253 0 0 chr17 38279837 38279999 -51224554 + CT-rich Low_complexity Low_complexity 2 163 0 241 261 0 15 chr17 38280032 38280097 -51224456 + CT-rich Low_complexity Low_complexity 4 67 0 2182 99 3 38 chr17 38280297 38280610 -51223943 - AluSq SINE Alu -11 302 1 496 307 93 19 chr17 38281018 38281233 -51223320 + L2 LINE L2 3082 3312 -1 2380 105 0 0 chr17 38281420 38281726 -51222827 + AluSg SINE Alu 1 306 -4 2270 92 3 0 chr17 38281780 38282085 -51222468 + AluSp SINE Alu 1 306 0 203 299 92 46 chr17 38282192 38282279 -51222274 - L2 LINE L2 -21 3251 3161 2247 115 0 0 chr17 38282281 38282569 -51221984 + AluSq SINE Alu 12 299 -14 1024 92 0 35 chr17 38282963 38283105 -51221448 - FLAM_C SINE Alu -6 137 1 956 137 27 0 chr17 38283105 38283251 -51221302 - MER20 DNA MER1_type -21 198 49 2364 261 34 9 chr17 38283251 38284055 -51220498 - MER45C DNA AcHobo -1 952 66 231 250 18 0 chr17 38284074 38284130 -51220423 - MER20 DNA MER1_type -162 57 1 202 340 47 19 chr17 38284135 38284241 -51220312 - L2 LINE L2 -202 3070 2962 680 289 53 13 chr17 38284796 38285021 -51219532 - MIR SINE MIR -16 246 13 270 188 60 128 chr17 38285019 38285062 -51219491 + MIR SINE MIR 124 168 -94 * 2021 138 3 0 chr17 38285062 38285372 -51219181 + AluSx SINE Alu 1 311 0 270 188 60 128 chr17 38285372 38285476 -51219077 + MIR SINE MIR 168 262 0 428 251 74 12 chr17 38285907 38286044 -51218509 - MIR SINE MIR -59 149 3 285 247 62 0 chr17 38286154 38286235 -51218318 + MIR SINE MIR 137 222 -40 389 319 37 37 chr17 38286245 38286408 -51218145 + L2 LINE L2 3102 3264 -8 300 254 29 60 chr17 38286870 38287025 -51217528 + MIR SINE MIR 42 191 -61 236 157 39 0 chr17 38287114 38287165 -51217388 + CT-rich Low_complexity Low_complexity 2 54 0 392 283 48 24 chr17 38287276 38287442 -51217111 + MIR SINE MIR 23 192 -70 277 217 0 0 chr17 38287563 38287609 -51216944 - L2 LINE L2 -2 3270 3225 191 311 0 0 chr17 38287613 38287658 -51216895 - L2 LINE L2 -3 3269 3225 342 258 51 84 chr17 38288230 38288408 -51216145 - MIR SINE MIR -71 191 20 303 333 30 0 chr17 38288399 38288498 -51216055 + MIR3 SINE MIR 85 186 -22 * 1189 157 98 0 chr17 38288527 38288731 -51215822 + MER58A DNA MER1_type 1 224 0 2396 82 7 0 chr17 38288855 38289158 -51215395 - AluY SINE Alu -6 305 1 445 184 124 5 chr17 38289215 38289398 -51215155 - L1ME2 LINE L1 -16 6148 5886 1689 159 48 24 chr17 38289407 38289696 -51214857 - AluJo SINE Alu -15 297 2 331 261 113 26 chr17 38289738 38289853 -51214700 - L2 LINE L2 -1 3312 3188 219 274 84 11 chr17 38289975 38290070 -51214483 - MIR3 SINE MIR 0 208 107 498 256 117 22 chr17 38290787 38290967 -51213586 - MIR SINE MIR -64 198 2 182 353 39 20 chr17 38291075 38291177 -51213376 + MIR SINE MIR 48 151 -111 275 263 10 0 chr17 38292590 38292688 -51211865 - MIR SINE MIR -62 146 94 22 0 0 0 chr17 38297660 38297682 -51206871 + AT_rich Low_complexity Low_complexity 1 22 0 2135 112 10 14 chr17 38298780 38299075 -51205478 + AluSq SINE Alu 1 294 -19 180 97 0 0 chr17 38299075 38299106 -51205447 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 187 260 58 106 chr17 38300029 38300133 -51204420 + L3b LINE CR1 1435 1533 -50 2274 82 3 38 chr17 38301161 38301501 -51203052 - AluY SINE Alu 0 311 3 425 323 82 76 chr17 38301549 38301852 -51202701 - L2 LINE L2 0 3272 2968 727 294 63 8 chr17 38302486 38302724 -51201829 + MIR SINE MIR 12 262 0 1859 140 10 40 chr17 38302985 38303285 -51201268 + AluJo SINE Alu 5 295 -17 327 280 98 15 chr17 38303686 38303818 -51200735 + L3 LINE CR1 1403 1545 -32 2352 100 0 3 chr17 38303959 38304259 -51200294 + AluSq SINE Alu 1 299 -14 234 0 0 0 chr17 38305152 38305178 -51199375 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 417 187 112 9 chr17 38305655 38305762 -51198791 - MER103 DNA DNA -13 153 36 1081 96 0 20 chr17 38306068 38306214 -51198339 + FLAM_C SINE Alu 1 143 0 653 167 42 0 chr17 38306237 38306357 -51198196 - FLAM_C SINE Alu -7 126 2 485 280 25 0 chr17 38309215 38309333 -51195220 - MIR SINE MIR -68 140 20 203 330 50 30 chr17 38309339 38309439 -51195114 - L2 LINE L2 -32 3240 3139 956 161 0 0 chr17 38309592 38309741 -51194812 - FRAM SINE Alu -6 170 22 406 265 60 0 chr17 38309874 38309991 -51194562 + MIR SINE MIR 84 207 -55 2600 44 0 0 chr17 38310443 38310738 -51193815 + AluY SINE Alu 1 295 -16 2185 108 0 35 chr17 38310747 38311062 -51193491 + AluSx SINE Alu 1 304 -8 495 346 14 37 chr17 38312587 38312801 -51191752 - MIR SINE MIR -2 260 52 225 0 0 0 chr17 38312891 38312916 -51191637 + (CA)n Simple_repeat Simple_repeat 2 26 0 203 88 29 0 chr17 38314082 38314116 -51190437 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 273 57 0 0 chr17 38314115 38314150 -51190403 + (CA)n Simple_repeat Simple_repeat 2 36 0 1441 165 81 28 chr17 38314250 38314572 -51189981 - MER58B DNA MER1_type 0 341 3 588 252 90 13 chr17 38314581 38314736 -51189817 + MER5B DNA MER1_type 1 167 -11 523 217 159 25 chr17 38314748 38314905 -51189648 - MER5A DNA MER1_type -6 183 6 505 280 122 11 chr17 38315015 38315204 -51189349 + MIR SINE MIR 9 218 -44 201 218 0 36 chr17 38315257 38315312 -51189241 + CT-rich Low_complexity Low_complexity 3 55 0 2550 44 6 25 chr17 38315648 38315965 -51188588 - AluY SINE Alu 0 311 1 304 253 300 20 chr17 38316558 38316708 -51187845 + MIR SINE MIR 37 228 -34 238 253 38 108 chr17 38316909 38317067 -51187486 + MER5A DNA MER1_type 3 149 -29 510 137 0 0 chr17 38317073 38317146 -51187407 + FRAM SINE Alu 26 98 -78 420 151 0 0 chr17 38317241 38317314 -51187239 + Alu SINE Alu 238 310 -2 298 270 264 6 chr17 38317420 38317579 -51186974 + MIR3 SINE MIR 8 207 -1 189 175 0 0 chr17 38317674 38317714 -51186839 + CT-rich Low_complexity Low_complexity 1 40 0 367 330 17 9 chr17 38318255 38318370 -51186183 + L2 LINE L2 3152 3267 -5 212 130 0 43 chr17 38318478 38318524 -51186029 + (TA)n Simple_repeat Simple_repeat 1 44 0 234 156 0 0 chr17 38319019 38319064 -51185489 + (ATGGTG)n Simple_repeat Simple_repeat 4 48 0 1395 169 56 16 chr17 38319799 38319879 -51184674 + AluJo SINE Alu 41 116 -196 261 57 0 0 chr17 38319879 38319914 -51184639 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1395 169 56 16 chr17 38319914 38320082 -51184471 + AluJo SINE Alu 116 299 -13 438 243 140 29 chr17 38320206 38320342 -51184211 - L2 LINE L2 0 3313 3163 372 22 0 0 chr17 38322133 38322178 -51182375 + (GA)n Simple_repeat Simple_repeat 2 46 0 2184 116 0 3 chr17 38322522 38322814 -51181739 + AluSx SINE Alu 1 291 -21 2166 102 0 58 chr17 38322858 38323171 -51181382 - AluSx SINE Alu -17 295 1 202 221 191 15 chr17 38323699 38323767 -51180786 - L2 LINE L2 0 3313 3234 344 305 190 14 chr17 38323945 38324240 -51180313 - L2 LINE L2 -346 2968 2622 301 103 0 0 chr17 38324689 38324728 -51179825 + L2 LINE L2 3255 3293 -20 710 283 81 18 chr17 38324790 38325013 -51179540 - MIR SINE MIR -6 256 20 234 367 13 0 chr17 38325348 38325427 -51179126 - MIR3 SINE MIR -119 89 10 24 0 0 0 chr17 38325651 38325675 -51178878 + AT_rich Low_complexity Low_complexity 1 24 0 545 278 76 10 chr17 38326193 38326391 -51178162 - MIR SINE MIR -39 223 13 448 244 59 22 chr17 38326399 38326534 -51178019 - L3 LINE CR1 -188 1389 1250 546 160 92 59 chr17 38328052 38328171 -51176382 - L2 LINE L2 0 3313 3191 574 308 99 9 chr17 38329094 38329305 -51175248 + MIR SINE MIR 20 249 -13 1838 158 16 29 chr17 38329465 38329781 -51174772 + AluSx SINE Alu 1 312 0 555 207 171 8 chr17 38330841 38330999 -51173554 + MIR SINE MIR 6 185 -61 499 293 144 6 chr17 38331298 38331479 -51173074 + MIR SINE MIR 2 207 -55 1977 172 3 0 chr17 38331605 38331913 -51172640 + AluJo SINE Alu 1 309 -3 326 331 16 33 chr17 38331994 38332115 -51172438 + MIR SINE MIR 48 166 -96 189 0 0 0 chr17 38332325 38332346 -51172207 + (T)n Simple_repeat Simple_repeat 1 21 0 2213 125 0 0 chr17 38332764 38333061 -51171492 + AluSx SINE Alu 1 297 -15 426 349 125 20 chr17 38333134 38333429 -51171124 + L1 LINE L1 4018 4343 -1803 542 202 0 10 chr17 38333599 38333698 -51170855 + L2 LINE L2 3195 3292 -21 850 167 15 0 chr17 38333703 38333835 -51170718 - FLAM_C SINE Alu -9 134 1 315 302 130 9 chr17 38334307 38334415 -51170138 + MIR SINE MIR 46 164 -44 565 232 32 74 chr17 38336150 38336340 -51168213 - MER5A DNA MER1_type 0 189 8 229 267 58 35 chr17 38337620 38337706 -51166847 + MIR SINE MIR 45 132 -76 554 299 71 16 chr17 38338854 38339038 -51165515 + MIR SINE MIR 21 214 -48 21 36 0 0 chr17 38339043 38339071 -51165482 + AT_rich Low_complexity Low_complexity 1 28 0 307 224 222 0 chr17 38341017 38341134 -51163419 + MIR SINE MIR 49 147 -61 372 316 29 15 chr17 38341830 38341966 -51162587 - MIR3 SINE MIR -49 159 22 1642 143 159 50 chr17 38342339 38342557 -51161996 - MSTB LTR MaLR -7 419 226 1954 145 30 3 chr17 38342557 38342860 -51161693 - AluJb SINE Alu -1 311 1 1642 143 159 50 chr17 38342860 38343019 -51161534 - MSTB LTR MaLR -200 226 1 8330 157 65 16 chr17 38343019 38344560 -51159993 - MSTB-int LTR MaLR 0 1651 34 2142 100 11 4 chr17 38344594 38344873 -51159680 - AluSq SINE Alu -32 281 1 269 149 21 0 chr17 38344873 38344920 -51159633 - MSTB-int LTR MaLR -1602 49 2 2599 143 52 5 chr17 38344921 38345328 -51159225 - MSTB LTR MaLR 0 426 1 367 172 75 32 chr17 38345366 38345459 -51159094 + MER103 DNA DNA 3 99 -67 367 265 139 8 chr17 38345533 38345730 -51158823 + MIR SINE MIR 4 244 -18 2317 115 0 3 chr17 38345805 38346110 -51158443 - AluSg SINE Alu -6 304 1 190 352 0 0 chr17 38346329 38346383 -51158170 + L2 LINE L2 3200 3253 -19 198 103 0 0 chr17 38346389 38346418 -51158135 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 354 338 49 36 chr17 38346421 38346646 -51157907 - MIR SINE MIR -6 256 29 193 320 26 26 chr17 38346698 38346776 -51157777 - MIR SINE MIR -167 95 18 753 307 40 9 chr17 38347222 38347447 -51157106 + MIR SINE MIR 12 243 -19 337 207 12 24 chr17 38347601 38347683 -51156870 + MIR SINE MIR 73 153 -109 2318 282 139 29 chr17 38347742 38348978 -51155575 + L2 LINE L2 1786 3179 -134 243 0 0 0 chr17 38348978 38349005 -51155548 + (TG)n Simple_repeat Simple_repeat 1 27 0 2318 282 139 29 chr17 38349005 38349153 -51155400 + L2 LINE L2 3179 3309 -4 397 315 8 8 chr17 38349141 38349268 -51155285 + MIR SINE MIR 134 260 -2 * 2325 118 0 0 chr17 38349838 38350144 -51154409 - AluSg SINE Alu -4 306 1 458 211 226 8 chr17 38350218 38350351 -51154202 - MIR SINE MIR -32 230 69 322 291 42 48 chr17 38350367 38350532 -51154021 + MIR SINE MIR 15 178 -84 378 0 0 0 chr17 38350586 38350628 -51153925 + (TG)n Simple_repeat Simple_repeat 2 43 0 518 278 106 0 chr17 38351048 38351199 -51153354 + MER5A DNA MER1_type 22 188 -1 499 240 8 25 chr17 38354432 38354553 -51150000 + MIR SINE MIR 102 220 -42 1192 224 113 82 chr17 38355813 38356019 -51148534 - L2 LINE L2 -1 3312 3114 2556 66 7 0 chr17 38356019 38356324 -51148229 + AluSp SINE Alu 1 307 -6 1192 224 113 82 chr17 38356324 38356372 -51148181 - L2 LINE L2 -199 3114 3069 2241 116 0 22 chr17 38356372 38356691 -51147862 - AluSx SINE Alu 0 312 1 1192 224 113 82 chr17 38356691 38357291 -51147262 - L2 LINE L2 -244 3069 2434 1935 154 26 3 chr17 38357317 38357622 -51146931 + AluJo SINE Alu 1 312 0 1341 154 75 161 chr17 38357809 38358086 -51146467 - MSTB LTR MaLR 0 426 204 7697 32 0 0 chr17 38358086 38359480 -51145073 - L1PA5 LINE L1 -6 6148 4754 1341 154 75 161 chr17 38359480 38359668 -51144885 - MSTB LTR MaLR -222 204 1 496 263 51 81 chr17 38359669 38359905 -51144648 - L2 LINE L2 -10 3303 3075 1604 204 124 32 chr17 38360055 38360516 -51144037 - MLT1D LTR MaLR -2 503 1 681 190 190 32 chr17 38360857 38361078 -51143475 + MIR SINE MIR 5 260 -2 514 250 61 15 chr17 38361132 38361264 -51143289 + L2 LINE L2 3176 3313 0 361 299 118 84 chr17 38361840 38362161 -51142392 - L2 LINE L2 -6 3266 2935 2206 103 0 50 chr17 38363072 38363391 -51141162 + AluSx SINE Alu 1 303 -9 236 121 0 0 chr17 38363669 38363702 -51140851 + Alu SINE Alu 2 34 -274 956 169 0 42 chr17 38363702 38363868 -51140685 + AluSg/x SINE Alu 126 284 -26 357 292 0 26 chr17 38363926 38364039 -51140514 + MIR SINE MIR 88 197 -65 469 297 51 0 chr17 38364318 38364456 -51140097 + L2 LINE L2 3167 3311 -2 2366 87 13 0 chr17 38364751 38365049 -51139504 - AluSx SINE Alu -10 302 1 2530 64 0 0 chr17 38365574 38365869 -51138684 - AluY SINE Alu -16 295 1 272 250 38 25 chr17 38366253 38366333 -51138220 + L2 LINE L2 3191 3271 -1 285 341 49 16 chr17 38366802 38366925 -51137628 + L2 LINE L2 3140 3266 -6 337 289 156 16 chr17 38366942 38367070 -51137483 - L2 LINE L2 -6 3266 3121 2344 96 0 0 chr17 38368635 38368957 -51135596 + AluSx SINE Alu 1 322 0 2311 99 3 0 chr17 38369355 38369692 -51134861 + AluSx SINE Alu 1 338 0 346 260 47 60 chr17 38370176 38370326 -51134227 + MIR SINE MIR 2 149 -113 1043 170 55 89 chr17 38370483 38370754 -51133799 + MIR SINE MIR 1 262 0 2251 115 3 0 chr17 38371121 38371417 -51133136 + AluSx SINE Alu 1 297 -15 344 324 37 32 chr17 38371793 38372077 -51132476 + L3 LINE CR1 670 1026 -551 1963 157 6 10 chr17 38372134 38372447 -51132106 - AluJb SINE Alu 0 312 1 1035 124 0 0 chr17 38372451 38372588 -51131965 - AluJb SINE Alu -175 137 1 468 278 335 8 chr17 38372588 38372958 -51131595 + L3 LINE CR1 1086 1576 -1 572 228 0 0 chr17 38373104 38373205 -51131348 + FRAM SINE Alu 1 101 -75 28 0 0 0 chr17 38423775 38423803 -51080750 + AT_rich Low_complexity Low_complexity 1 28 0 2360 100 0 3 chr17 38423803 38424114 -51080439 - AluSq SINE Alu -3 310 1 2021 137 0 16 chr17 38424349 38424663 -51079890 - AluSx SINE Alu -3 309 1 2282 108 0 0 chr17 38424855 38425151 -51079402 + AluSq SINE Alu 1 296 -17 291 167 0 21 chr17 38425255 38425303 -51079250 + MER4E LTR ERV1 648 694 -72 33 0 0 0 chr17 38425308 38425341 -51079212 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr17 38425450 38425471 -51079082 + AT_rich Low_complexity Low_complexity 1 21 0 1919 153 0 3 chr17 38430392 38430686 -51073867 + AluJb SINE Alu 3 295 -17 2293 88 17 3 chr17 38431131 38431426 -51073127 - AluSp SINE Alu -11 302 4 2264 109 0 22 chr17 38431426 38431746 -51072807 - AluSq SINE Alu 0 313 1 2354 87 0 3 chr17 38432519 38432818 -51071735 + AluSx SINE Alu 1 298 -14 1096 134 0 0 chr17 38434880 38435037 -51069516 - AluSc SINE Alu -23 286 130 2205 98 3 42 chr17 38435050 38435357 -51069196 - AluSp SINE Alu -18 295 1 2369 93 0 7 chr17 38435667 38435977 -51068576 + AluSq SINE Alu 1 308 -5 413 290 62 40 chr17 38436645 38436821 -51067732 - MIR SINE MIR -36 226 47 911 255 79 67 chr17 38438667 38438996 -51065557 + MER102b DNA MER1_type 1 333 -8 2208 124 3 0 chr17 38439348 38439654 -51064899 + AluSx SINE Alu 1 307 -5 1916 149 37 0 chr17 38440611 38440907 -51063646 + AluJb SINE Alu 1 307 -5 2183 90 4 4 chr17 38441388 38441703 -51062850 + AluSg SINE Alu 1 315 0 856 251 27 82 chr17 38442380 38442628 -51061925 + L2 LINE L2 2933 3153 -160 1793 164 0 7 chr17 38442628 38442936 -51061617 - AluJb SINE Alu 0 306 1 856 251 27 82 chr17 38442936 38443088 -51061465 + L2 LINE L2 3153 3312 -1 1122 219 62 0 chr17 38443750 38443992 -51060561 - MIR SINE MIR -2 260 4 942 134 0 7 chr17 38445756 38445898 -51058655 + AluJb SINE Alu 1 141 -171 2241 109 3 28 chr17 38446039 38446359 -51058194 + AluSx SINE Alu 1 312 0 2150 100 38 0 chr17 38446416 38446707 -51057846 + AluSp SINE Alu 12 313 0 22 70 0 0 chr17 38446709 38446752 -51057801 + AT_rich Low_complexity Low_complexity 1 43 0 2141 129 0 3 chr17 38446862 38447164 -51057389 - AluSx SINE Alu -11 301 1 2303 104 3 10 chr17 38447586 38447894 -51056659 - AluSx SINE Alu -6 306 1 341 298 69 38 chr17 38448021 38448152 -51056401 + L2 LINE L2 3138 3272 0 489 249 61 66 chr17 38448181 38448378 -51056175 + L1ME4a LINE L1 5619 5814 -307 255 227 58 71 chr17 38448422 38448484 -51056069 + L1ME4a LINE L1 5970 6031 -90 1989 151 0 10 chr17 38448484 38448788 -51055765 - AluJb SINE Alu -11 301 1 255 227 58 71 chr17 38448788 38448879 -51055674 + L1ME4a LINE L1 6031 6121 0 1553 183 60 0 chr17 38449045 38449313 -51055240 - AluJo SINE Alu -26 286 3 310 180 17 34 chr17 38449955 38450042 -51054511 - MIR SINE MIR -75 187 104 718 236 50 32 chr17 38450738 38450958 -51053595 - L1ME2 LINE L1 0 6164 5941 276 100 0 0 chr17 38451788 38451828 -51052725 + (CTA)n Simple_repeat Simple_repeat 2 41 0 561 166 50 83 chr17 38451904 38452085 -51052468 + MLT1D LTR MaLR 143 317 -188 209 318 175 24 chr17 38452099 38452225 -51052328 - MIR SINE MIR -111 151 7 1548 153 107 55 chr17 38452441 38452768 -51051785 + MER2 DNA MER2_type 1 344 0 2070 170 128 29 chr17 38453349 38453801 -51050752 + MLT1D LTR MaLR 1 497 -8 1488 220 63 33 chr17 38453878 38454135 -51050418 - MLT1I LTR MaLR 0 409 134 2117 109 0 30 chr17 38454135 38454300 -51050253 - AluSx SINE Alu -17 295 142 2402 75 0 0 chr17 38454300 38454594 -51049959 - AluSg SINE Alu -15 295 2 2117 109 0 30 chr17 38454594 38454732 -51049821 - AluSx SINE Alu -170 142 1 1488 220 63 33 chr17 38454732 38454869 -51049684 - MLT1I LTR MaLR -275 134 3 22 35 0 0 chr17 38454986 38455015 -51049538 + AT_rich Low_complexity Low_complexity 1 29 0 894 185 75 48 chr17 38456711 38456821 -51047732 - MER63 DNA MER1_type 0 1061 955 1922 154 7 13 chr17 38456821 38457120 -51047433 + AluJo SINE Alu 1 297 -15 894 185 75 48 chr17 38457120 38457236 -51047317 - MER63 DNA MER1_type -106 955 829 265 161 268 0 chr17 38457239 38457295 -51047258 + MER81 DNA DNA 2 72 -42 * 362 59 0 0 chr17 38457291 38457342 -51047211 - MER63 DNA MER1_type -416 645 595 2388 93 0 0 chr17 38457342 38457643 -51046910 + AluSg SINE Alu 1 301 -9 1165 139 0 0 chr17 38457646 38457818 -51046735 + AluJb SINE Alu 134 305 -7 1509 146 79 8 chr17 38457829 38458082 -51046471 + AluJo SINE Alu 1 271 -41 207 0 0 0 chr17 38458123 38458146 -51046407 + (TG)n Simple_repeat Simple_repeat 2 24 0 198 246 62 0 chr17 38458148 38458213 -51046340 + MIR SINE MIR 185 253 -9 2350 98 10 0 chr17 38458951 38459258 -51045295 + AluSx SINE Alu 1 310 -2 2229 92 20 0 chr17 38463050 38463343 -51041210 - AluSp SINE Alu -14 299 1 813 127 140 95 chr17 38463398 38463619 -51040934 + AluJb SINE Alu 70 300 -12 291 42 0 125 chr17 38464505 38464521 -51040032 + AluSg/x SINE Alu 124 133 -167 2345 61 0 3 chr17 38464521 38464817 -51039736 + AluSq SINE Alu 1 295 -18 225 0 0 0 chr17 38465789 38465814 -51038739 + (T)n Simple_repeat Simple_repeat 1 25 0 1543 132 21 121 chr17 38468361 38468701 -51035852 + AluJb SINE Alu 1 306 -6 2071 106 20 0 chr17 38468701 38468993 -51035560 + AluSx SINE Alu 1 298 -14 206 116 23 0 chr17 38469252 38469295 -51035258 + (TA)n Simple_repeat Simple_repeat 2 45 0 436 251 55 31 chr17 38470367 38470437 -51034116 - L1MA10 LINE L1 0 6334 6265 430 268 47 32 chr17 38470437 38470627 -51033926 - L1ME1 LINE L1 -61 6105 5913 380 235 11 38 chr17 38470631 38470660 -51033893 + L1MC4 LINE L1 6615 6643 -1399 1973 106 0 17 chr17 38470660 38470952 -51033601 + AluSx SINE Alu 1 287 -25 252 0 0 0 chr17 38470956 38470984 -51033569 + (CA)n Simple_repeat Simple_repeat 2 29 0 380 235 11 38 chr17 38470984 38471076 -51033477 + L1MC4 LINE L1 6646 6703 -1339 325 264 11 22 chr17 38471072 38471163 -51033390 + L1MC4 LINE L1 6614 6703 -1339 * 1186 213 84 0 chr17 38471184 38471471 -51033082 - L1ME1 LINE L1 -270 5896 5586 297 118 0 0 chr17 38471492 38471543 -51033010 + (TA)n Simple_repeat Simple_repeat 1 51 0 2027 117 0 0 chr17 38471543 38471826 -51032727 - AluSx SINE Alu -29 283 1 474 238 158 6 chr17 38471856 38472020 -51032533 - MER5A DNA MER1_type 0 189 1 306 232 27 71 chr17 38472099 38472211 -51032342 + LTR16A LTR ERVL 103 209 -241 1767 99 56 0 chr17 38472544 38472796 -51031757 + AluSx SINE Alu 6 271 -41 1929 127 0 7 chr17 38474013 38474297 -51030256 - AluSx SINE Alu -30 282 1 198 0 0 0 chr17 38474620 38474642 -51029911 + (A)n Simple_repeat Simple_repeat 1 22 0 617 200 178 0 chr17 38474897 38475032 -51029521 - AluSg/x SINE Alu -17 293 135 657 147 0 9 chr17 38475061 38475170 -51029383 + AluJb SINE Alu 26 133 -179 1427 140 0 0 chr17 38475171 38475393 -51029160 + AluSg/x SINE Alu 86 307 -5 1357 177 59 15 chr17 38475397 38475668 -51028885 + AluJb SINE Alu 1 283 -29 2211 97 0 10 chr17 38476069 38476369 -51028184 - AluSx SINE Alu -15 297 1 1562 243 32 80 chr17 38476765 38476832 -51027721 + MLT1G1 LTR MaLR 5 74 -521 1730 169 0 3 chr17 38476832 38477133 -51027420 - AluJb SINE Alu -10 302 3 1562 243 32 80 chr17 38477133 38477244 -51027309 + MLT1G1 LTR MaLR 74 189 -406 643 220 94 0 chr17 38477244 38477403 -51027150 + FAM SINE Alu 1 174 -1 1562 243 32 80 chr17 38477403 38477749 -51026804 + MLT1G1 LTR MaLR 189 505 -90 1486 197 3 10 chr17 38477794 38478088 -51026465 + AluJo SINE Alu 1 292 -20 2096 100 14 3 chr17 38478461 38478750 -51025803 + AluSq SINE Alu 1 292 -21 419 222 201 14 chr17 38478836 38478980 -51025573 + MER5A DNA MER1_type 13 183 -6 184 333 0 13 chr17 38479154 38479232 -51025321 - MIR SINE MIR -80 128 52 2171 80 3 3 chr17 38480448 38480760 -51023793 + AluSq SINE Alu 1 312 0 932 144 6 33 chr17 38480774 38480955 -51023598 + FRAM SINE Alu 1 176 0 945 113 75 24 chr17 38480966 38481270 -51023283 + THE1C LTR MaLR 1 375 0 492 255 21 35 chr17 38481326 38481467 -51023086 + MER5A DNA MER1_type 7 145 -44 2615 39 0 0 chr17 38481652 38481963 -51022590 + AluY SINE Alu 1 311 0 1774 133 28 14 chr17 38482218 38482504 -51022049 - AluJb SINE Alu -16 296 7 1572 162 68 0 chr17 38482520 38482798 -51021755 - AluJb SINE Alu -15 297 1 1913 129 28 0 chr17 38482837 38483124 -51021429 + AluSx SINE Alu 1 295 -17 1994 118 0 58 chr17 38483333 38483511 -51021042 - AluSx SINE Alu -1 311 159 1985 123 3 0 chr17 38483511 38483804 -51020749 - AluSg SINE Alu -16 294 1 1994 118 0 58 chr17 38483804 38483954 -51020599 - AluSx SINE Alu -153 159 2 2383 81 0 0 chr17 38484320 38484629 -51019924 + AluSc SINE Alu 1 309 0 219 36 0 0 chr17 38484790 38484818 -51019735 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 203 255 0 0 chr17 38485636 38485683 -51018870 + CT-rich Low_complexity Low_complexity 1 47 0 634 200 16 0 chr17 38485779 38485904 -51018649 + FLAM_A SINE Alu 11 137 -5 2472 57 0 0 chr17 38485985 38486283 -51018270 + AluY SINE Alu 1 298 -13 342 181 37 0 chr17 38486829 38486908 -51017645 + L1ME3A LINE L1 5532 5615 -555 442 248 135 0 chr17 38486913 38487015 -51017538 + L1ME3A LINE L1 5705 5832 -338 971 87 0 36 chr17 38487015 38487153 -51017400 + FLAM_C SINE Alu 1 133 0 442 248 135 0 chr17 38487153 38487191 -51017362 + L1ME3A LINE L1 5832 5864 -306 309 109 0 0 chr17 38487239 38487285 -51017268 + (CA)n Simple_repeat Simple_repeat 2 47 0 221 314 85 51 chr17 38487655 38487773 -51016780 + L2 LINE L2 3147 3268 -4 247 282 54 49 chr17 38489115 38489278 -51015275 - MIR SINE MIR -60 148 18 188 298 10 87 chr17 38489420 38489524 -51015029 + MIR SINE MIR 111 206 -56 28 48 0 0 chr17 38490035 38490077 -51014476 + GC_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr17 38490319 38490342 -51014211 + (CGCGG)n Simple_repeat Simple_repeat 1 23 0 32 111 0 0 chr17 38490392 38490536 -51014017 + GC_rich Low_complexity Low_complexity 1 144 0 1176 138 67 0 chr17 38492255 38492450 -51012103 + MER3 DNA MER1_type 1 208 -1 1429 167 51 31 chr17 38492491 38492648 -51011905 - AluJb SINE Alu -11 301 134 1853 86 75 14 chr17 38492648 38492927 -51011626 - AluSp SINE Alu -17 296 1 1429 167 51 31 chr17 38492927 38493063 -51011490 - AluJb SINE Alu -178 134 2 372 145 0 0 chr17 38494452 38494514 -51010039 - AluSx SINE Alu -2 300 239 1084 101 5 74 chr17 38494514 38494625 -51009928 - AluSx SINE Alu -136 176 82 2294 54 9 31 chr17 38494625 38494942 -51009611 + AluY SINE Alu 1 310 -1 1084 101 5 74 chr17 38494942 38495019 -51009534 - AluSx SINE Alu -230 82 1 313 266 191 0 chr17 38495019 38495145 -51009408 - MIR SINE MIR -72 190 42 1220 94 0 6 chr17 38495239 38495409 -51009144 - AluSp SINE Alu -8 305 137 1833 136 0 10 chr17 38495449 38495744 -51008809 + AluSx SINE Alu 5 296 -16 2233 93 0 3 chr17 38495745 38496047 -51008506 + AluSx SINE Alu 1 301 -11 191 254 0 36 chr17 38496586 38496641 -51007912 + L2 LINE L2 3239 3291 -22 2139 100 0 29 chr17 38497615 38497924 -51006629 - AluSx SINE Alu -12 300 1 1779 131 21 3 chr17 38499013 38499295 -51005258 - AluSx SINE Alu -16 296 10 1455 201 7 13 chr17 38499431 38499734 -51004819 - AluJb SINE Alu -11 301 1 2171 97 13 0 chr17 38502138 38502437 -51002116 - AluSg SINE Alu -7 303 1 2154 107 7 0 chr17 38502515 38502813 -51001740 + AluSq SINE Alu 1 300 -13 298 296 92 83 chr17 38504361 38504515 -51000038 - MARNA DNA Mariner -173 413 262 1937 105 45 0 chr17 38504515 38504801 -50999752 + AluSx SINE Alu 1 299 -13 2121 111 0 19 chr17 38504803 38505119 -50999434 + AluSg SINE Alu 1 310 0 298 296 92 83 chr17 38505119 38505309 -50999244 - MARNA DNA Mariner -324 262 63 269 333 102 0 chr17 38505192 38505339 -50999214 + MARNA DNA Mariner 394 555 -31 * 266 200 100 0 chr17 38505339 38505399 -50999154 + MIR SINE MIR 197 262 0 988 169 0 0 chr17 38506022 38506188 -50998365 - AluJb SINE Alu -12 300 135 1525 186 6 44 chr17 38507006 38507323 -50997230 + AluJo SINE Alu 1 305 -7 1925 130 7 20 chr17 38507405 38507705 -50996848 - AluSx SINE Alu -16 296 1 2235 92 0 0 chr17 38507914 38508208 -50996345 + AluSx SINE Alu 1 294 -18 2169 105 7 0 chr17 38508474 38508779 -50995774 + AluSx SINE Alu 1 307 -5 328 300 39 23 chr17 38510104 38510234 -50994319 - L1ME4a LINE L1 -35 6086 5955 2310 68 3 0 chr17 38510632 38510928 -50993625 - AluSp SINE Alu -16 297 1 2037 118 0 20 chr17 38511074 38511380 -50993173 + AluSx SINE Alu 2 301 -11 401 319 97 21 chr17 38511494 38511613 -50992940 - MIR SINE MIR -6 256 147 882 143 0 0 chr17 38511613 38511746 -50992807 + FLAM_C SINE Alu 1 133 0 401 319 97 21 chr17 38511746 38511864 -50992689 - MIR SINE MIR -115 147 1 474 304 175 0 chr17 38511873 38512044 -50992509 + MIR SINE MIR 60 260 -2 1909 152 0 0 chr17 38512184 38512480 -50992073 - AluSx SINE Alu -16 296 1 2004 112 17 7 chr17 38513109 38513405 -50991148 - AluSx SINE Alu -12 300 2 1932 145 3 0 chr17 38513851 38514141 -50990412 - AluJb SINE Alu -21 291 1 978 154 18 72 chr17 38514264 38514485 -50990068 + L1MC5 LINE L1 7702 7910 -51 2250 102 0 3 chr17 38515120 38515415 -50989138 - AluSx SINE Alu -18 294 1 2207 98 10 7 chr17 38515426 38515722 -50988831 - AluSx SINE Alu -15 297 1 1422 94 0 33 chr17 38516291 38516504 -50988049 - AluY SINE Alu 0 311 106 768 171 47 0 chr17 38516504 38516633 -50987920 + AluSp/q SINE Alu 170 304 -9 975 121 8 0 chr17 38516690 38516822 -50987731 - FRAM SINE Alu -45 131 1 776 196 63 13 chr17 38517153 38517311 -50987242 + FRAM SINE Alu 1 166 0 2138 101 0 17 chr17 38517614 38517933 -50986620 - AluSg SINE Alu 0 314 1 342 244 17 50 chr17 38517946 38518065 -50986488 - MER5A DNA MER1_type -9 180 66 224 175 0 0 chr17 38518412 38518452 -50986101 + L2 LINE L2 3274 3313 0 1942 135 103 19 chr17 38518934 38519245 -50985308 + MER1B DNA MER1_type 1 337 0 783 218 0 0 chr17 38519298 38519431 -50985122 - FLAM_A SINE Alu 0 133 1 2051 132 10 6 chr17 38519735 38520046 -50984507 + AluSx SINE Alu 1 312 0 1670 135 0 111 chr17 38520068 38520199 -50984354 + AluJo SINE Alu 3 147 -165 2444 81 0 0 chr17 38520199 38520496 -50984057 - AluSx SINE Alu -15 297 1 1670 135 0 111 chr17 38520496 38520697 -50983856 + AluJo SINE Alu 147 298 -14 2056 153 0 0 chr17 38520697 38521005 -50983548 + AluSx SINE Alu 1 308 -4 235 323 0 0 chr17 38521172 38521262 -50983291 - MIR SINE MIR -62 146 65 1781 163 3 3 chr17 38521303 38521585 -50982968 + AluJb SINE Alu 1 282 -30 405 54 0 0 chr17 38521588 38521644 -50982909 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 83 21 42 chr17 38521772 38521820 -50982733 + (TA)n Simple_repeat Simple_repeat 2 48 0 2871 76 3 0 chr17 38522004 38522359 -50982194 + L1PA13 LINE L1 5805 6160 -3 2200 114 10 3 chr17 38522486 38522793 -50981760 + AluSx SINE Alu 1 309 -3 2090 153 0 0 chr17 38522801 38523108 -50981445 + AluSx SINE Alu 1 307 -5 263 314 67 62 chr17 38523886 38524071 -50980482 + L2 LINE L2 2646 2834 -480 2208 111 14 0 chr17 38524071 38524360 -50980193 - AluSx SINE Alu -19 293 1 263 314 67 62 chr17 38524360 38524384 -50980169 + L2 LINE L2 2834 2856 -458 344 227 13 0 chr17 38524411 38524486 -50980067 - MIR SINE MIR -157 105 30 2262 88 0 10 chr17 38524601 38524941 -50979612 + AluY SINE Alu 1 311 0 21 0 0 0 chr17 38524951 38524972 -50979581 + AT_rich Low_complexity Low_complexity 1 21 0 2302 89 20 0 chr17 38525689 38525993 -50978560 + AluSg SINE Alu 1 310 0 2494 73 0 10 chr17 38526208 38526522 -50978031 + AluSq SINE Alu 1 311 -2 183 325 0 25 chr17 38527826 38527870 -50976683 - MIR SINE MIR 0 262 219 2225 103 3 0 chr17 38527870 38528160 -50976393 - AluSx SINE Alu -21 291 1 183 325 0 25 chr17 38528160 38528195 -50976358 - MIR SINE MIR -43 219 185 2259 104 7 0 chr17 38528283 38528580 -50975973 - AluSq SINE Alu -14 299 1 1834 151 19 19 chr17 38528660 38528971 -50975582 + AluJb SINE Alu 1 311 -1 1629 154 4 36 chr17 38528971 38529251 -50975302 + AluJo SINE Alu 22 292 -20 1454 113 80 0 chr17 38530088 38530301 -50974252 - MER30 DNA MER1_type 0 230 1 242 322 110 0 chr17 38530303 38530421 -50974132 + MIR SINE MIR 91 221 -41 1503 125 0 9 chr17 38530446 38530662 -50973891 + AluJo SINE Alu 87 300 -12 862 228 145 4 chr17 38530683 38530911 -50973642 + MIR SINE MIR 3 262 0 2583 53 0 3 chr17 38530961 38531264 -50973289 + AluY SINE Alu 1 302 -9 802 171 0 23 chr17 38532657 38532786 -50971767 - FLAM_C SINE Alu -3 130 5 1857 153 24 0 chr17 38532827 38533122 -50971431 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr17 38533640 38533670 -50970883 + AT_rich Low_complexity Low_complexity 1 30 0 923 141 0 0 chr17 38533672 38533800 -50970753 - FLAM_C SINE Alu -5 128 1 2234 116 0 0 chr17 38534716 38535019 -50969534 + AluSx SINE Alu 1 303 -9 365 269 56 19 chr17 38535388 38535496 -50969057 + L2 LINE L2 3188 3299 -14 716 229 8 0 chr17 38535863 38535994 -50968559 + FLAM_A SINE Alu 1 132 -1 1815 148 0 68 chr17 38536003 38536328 -50968225 - AluJo SINE Alu -9 303 1 865 255 82 5 chr17 38536470 38536678 -50967875 + MER58A DNA MER1_type 1 224 0 2306 109 0 3 chr17 38536729 38537031 -50967522 + AluSq SINE Alu 1 301 -12 1826 173 7 0 chr17 38537106 38537401 -50967152 - AluJb SINE Alu -15 297 1 198 0 0 0 chr17 38538062 38538084 -50966469 + (A)n Simple_repeat Simple_repeat 1 22 0 311 377 34 17 chr17 38538090 38538265 -50966288 + MIR SINE MIR 20 197 -65 2125 122 0 3 chr17 38538319 38538614 -50965939 + AluSg SINE Alu 3 296 -14 2040 146 0 7 chr17 38539169 38539470 -50965083 - AluSx SINE Alu -13 299 1 2139 79 25 14 chr17 38540042 38540376 -50964177 + AluSp SINE Alu 1 337 0 302 305 30 54 chr17 38540528 38540695 -50963858 - MIR SINE MIR -10 252 90 1707 184 0 0 chr17 38540700 38541004 -50963549 + AluJb SINE Alu 1 304 0 980 178 18 0 chr17 38541009 38541172 -50963381 + FRAM SINE Alu 1 158 -18 180 398 11 11 chr17 38541728 38541821 -50962732 + MIR SINE MIR 32 124 -84 2137 122 0 0 chr17 38542596 38542890 -50961663 + AluSx SINE Alu 1 294 -18 2505 57 0 25 chr17 38542892 38543206 -50961347 + AluY SINE Alu 1 306 -5 2130 119 7 0 chr17 38543624 38543926 -50960627 + AluSx SINE Alu 1 304 -8 869 154 0 7 chr17 38544267 38544403 -50960150 + AluJb SINE Alu 1 135 -177 1794 159 21 0 chr17 38544403 38544693 -50959860 + AluJb SINE Alu 1 296 -16 2361 64 0 0 chr17 38544695 38545016 -50959537 + AluY SINE Alu 1 321 0 343 288 32 8 chr17 38545019 38545144 -50959409 + L1MC4a LINE L1 6545 6672 -1136 1447 69 6 0 chr17 38545144 38545317 -50959236 - AluSp SINE Alu -138 175 2 826 207 178 55 chr17 38545317 38545769 -50958784 + L1MC5 LINE L1 6820 7423 -538 525 255 82 48 chr17 38545783 38545959 -50958594 + MER21B LTR ERV1 313 531 -400 1998 162 87 58 chr17 38545960 38546317 -50958236 + L1MD3 LINE L1 7471 7816 -179 2088 135 0 3 chr17 38546317 38546613 -50957940 - AluSx SINE Alu -17 295 1 1592 208 3 3 chr17 38546614 38546908 -50957645 - AluJo SINE Alu -18 294 1 1998 162 87 58 chr17 38546908 38547029 -50957524 + L1MD3 LINE L1 7815 7965 -30 816 171 0 0 chr17 38547032 38547149 -50957404 + AluJb SINE Alu 2 118 -194 24 67 0 0 chr17 38547155 38547200 -50957353 + AT_rich Low_complexity Low_complexity 1 45 0 326 223 58 58 chr17 38547215 38547336 -50957217 + L1MC5 LINE L1 7471 7591 -370 180 0 0 0 chr17 38547336 38547356 -50957197 + (A)n Simple_repeat Simple_repeat 1 20 0 2456 193 20 64 chr17 38547356 38547820 -50956733 + L1ME2 LINE L1 5423 5857 -307 2217 100 10 10 chr17 38547820 38548129 -50956424 + AluSx SINE Alu 3 311 -1 2456 193 20 64 chr17 38548129 38548259 -50956294 + L1ME2 LINE L1 5857 5991 -173 534 249 6 36 chr17 38548335 38548419 -50956134 + L1MC5 LINE L1 7717 7795 -166 2129 119 30 0 chr17 38548419 38548722 -50955831 + AluSx SINE Alu 1 312 0 534 249 6 36 chr17 38548722 38548802 -50955751 + L1MC5 LINE L1 7795 7876 -85 580 207 44 7 chr17 38548964 38549099 -50955454 + MLT1H1 LTR MaLR 416 555 0 236 325 44 26 chr17 38549586 38549700 -50954853 + MER5B DNA MER1_type 63 178 0 810 144 0 0 chr17 38550703 38550821 -50953732 + AluJb SINE Alu 1 118 -194 29 28 0 0 chr17 38550821 38550857 -50953696 + AT_rich Low_complexity Low_complexity 1 36 0 572 216 7 68 chr17 38550884 38551032 -50953521 + MLT1E2 LTR MaLR 62 200 -424 730 145 0 60 chr17 38551046 38551163 -50953390 + FLAM_C SINE Alu 2 111 -32 2528 84 0 0 chr17 38551211 38551520 -50953033 - AluY SINE Alu -2 309 1 973 164 20 0 chr17 38551536 38551688 -50952865 + AluJb SINE Alu 131 285 -27 1459 212 62 44 chr17 38551733 38552138 -50952415 + MLT1E2 LTR MaLR 207 618 -8 2131 132 0 7 chr17 38552292 38552587 -50951966 - AluSx SINE Alu -19 293 1 977 170 0 0 chr17 38553429 38553582 -50950971 - FRAM SINE Alu -19 157 5 2110 117 17 3 chr17 38553595 38553895 -50950658 - AluSg SINE Alu -4 306 3 190 254 0 109 chr17 38554036 38554091 -50950462 + MIR SINE MIR 21 69 -193 244 159 0 0 chr17 38554094 38554138 -50950415 + HsTC2 DNA Tc2 1 44 -1854 873 179 6 13 chr17 38554145 38554301 -50950252 + FRAM SINE Alu 1 155 -21 21 36 0 0 chr17 38554304 38554332 -50950221 + AT_rich Low_complexity Low_complexity 1 28 0 1532 181 0 29 chr17 38554352 38554633 -50949920 + AluJo SINE Alu 25 297 -15 436 259 30 8 chr17 38554634 38554765 -50949788 + MER104 DNA Tc2 47 180 0 838 227 16 0 chr17 38554765 38554950 -50949603 + MIR SINE MIR 75 262 0 1925 127 3 59 chr17 38555105 38555427 -50949126 + AluSx SINE Alu 1 304 -8 2320 84 3 7 chr17 38555428 38555737 -50948816 + AluSp SINE Alu 1 308 -5 372 109 0 0 chr17 38555755 38555810 -50948743 - Alu SINE Alu -5 297 243 861 98 0 0 chr17 38555814 38555926 -50948627 + AluSc SINE Alu 182 293 -16 1324 111 5 58 chr17 38555926 38556134 -50948419 - AluSq SINE Alu -116 197 1 2269 129 0 0 chr17 38556237 38556547 -50948006 + AluSg SINE Alu 1 310 0 1767 179 29 0 chr17 38557048 38557328 -50947225 - AluJo SINE Alu -24 288 1 1725 152 22 0 chr17 38557484 38557803 -50946750 + AluSx SINE Alu 1 325 0 2106 131 0 16 chr17 38557804 38557941 -50946612 + AluSx SINE Alu 1 139 -173 2282 104 0 0 chr17 38557941 38558239 -50946314 + AluSg SINE Alu 1 298 -12 2106 131 0 16 chr17 38558239 38558414 -50946139 + AluSx SINE Alu 139 308 -4 1624 175 0 55 chr17 38558483 38558792 -50945761 - AluJb SINE Alu -20 292 1 1342 193 71 4 chr17 38558903 38559172 -50945381 - AluJb SINE Alu -25 287 1 1959 157 0 0 chr17 38559528 38559821 -50944732 - AluSx SINE Alu -18 294 2 1733 204 138 67 chr17 38559821 38560429 -50944124 - MER20B DNA MER1_type -109 674 24 281 321 0 9 chr17 38560446 38560555 -50943998 + L1MC/D LINE L1 5775 5882 -1926 259 111 0 0 chr17 38560576 38560621 -50943932 - AluSp/q SINE Alu 0 303 259 331 190 17 0 chr17 38560721 38560779 -50943774 - AluJ/FLAM SINE Alu -237 65 7 2243 127 0 0 chr17 38561207 38561514 -50943039 + AluSq SINE Alu 6 312 -1 711 158 0 0 chr17 38561620 38561721 -50942832 - FLAM_C SINE Alu -36 107 7 1981 99 16 53 chr17 38562047 38562350 -50942203 - AluSg SINE Alu -18 292 1 1434 235 122 64 chr17 38562352 38562766 -50941787 + L1MC4 LINE L1 5518 5907 -2135 2114 133 36 0 chr17 38562766 38563068 -50941485 + AluSq SINE Alu 1 313 0 1434 235 122 64 chr17 38563068 38563753 -50940800 + L1MC4 LINE L1 5907 7090 -952 2630 125 8 5 chr17 38563757 38564148 -50940405 + L1PA15 LINE L1 5766 6157 -8 937 182 6 29 chr17 38564236 38564406 -50940147 + FRAM SINE Alu 1 166 0 340 160 154 138 chr17 38564408 38564562 -50939991 + L1MC4 LINE L1 7894 8041 -1 222 213 16 49 chr17 38564590 38564651 -50939902 + MIR3 SINE MIR 120 178 -30 2093 102 4 0 chr17 38564720 38564995 -50939558 + AluSx SINE Alu 1 276 -36 2052 124 0 23 chr17 38565231 38565530 -50939023 + AluSx SINE Alu 1 292 -20 404 291 58 69 chr17 38565768 38565957 -50938596 + MIR SINE MIR 60 246 -16 1350 167 47 8 chr17 38566485 38566742 -50937811 + AluJo SINE Alu 1 267 -45 463 149 191 0 chr17 38566747 38566841 -50937712 - AluSg/x SINE Alu -9 300 189 187 298 161 37 chr17 38567281 38567442 -50937111 - MIR SINE MIR 0 262 82 2073 114 7 0 chr17 38567477 38567776 -50936777 + AluSp SINE Alu 1 301 -12 2055 103 17 0 chr17 38567841 38568133 -50936420 + AluSq SINE Alu 1 297 -16 1543 87 104 0 chr17 38568139 38568369 -50936184 + AluSx SINE Alu 1 254 -58 23 33 0 0 chr17 38568896 38568926 -50935627 + GC_rich Low_complexity Low_complexity 1 30 0 31 92 0 0 chr17 38569137 38569224 -50935329 + GC_rich Low_complexity Low_complexity 1 87 0 666 275 93 12 chr17 38569804 38570011 -50934542 - MIR SINE MIR -2 260 40 347 229 73 72 chr17 38570125 38570175 -50934378 - L1ME4a LINE L1 -25 6056 6008 1989 96 7 3 chr17 38570175 38570481 -50934072 + AluSq SINE Alu 2 308 0 347 229 73 72 chr17 38570481 38570585 -50933968 - L1ME4a LINE L1 -73 6008 1175 1163 262 132 34 chr17 38570602 38571148 -50933405 - L2 LINE L2 -4 3309 2690 2264 88 3 10 chr17 38571148 38571455 -50933098 + AluSq SINE Alu 1 305 -8 1163 262 132 34 chr17 38571455 38571489 -50933064 - L2 LINE L2 -623 2690 2661 730 164 16 8 chr17 38571509 38571631 -50932922 + FLAM_A SINE Alu 1 123 -10 1817 146 20 0 chr17 38571953 38572248 -50932305 + AluSx SINE Alu 1 301 -11 1680 175 0 19 chr17 38572348 38572657 -50931896 + AluJb SINE Alu 1 303 -9 241 302 233 6 chr17 38572729 38572901 -50931652 - L2 LINE L2 -863 2451 2241 2379 68 0 0 chr17 38573054 38573349 -50931204 + AluY SINE Alu 1 295 -16 479 218 23 23 chr17 38573430 38573563 -50930990 - MER94 DNA DNA 0 134 2 235 186 29 57 chr17 38573712 38573782 -50930771 + L2 LINE L2 3014 3081 -191 21 0 0 0 chr17 38573902 38573923 -50930630 + AT_rich Low_complexity Low_complexity 1 21 0 1623 192 3 3 chr17 38574166 38574463 -50930090 + AluJb SINE Alu 1 297 -15 5303 124 30 46 chr17 38574464 38574571 -50929982 + L1MA8 LINE L1 5194 5301 -990 2001 85 11 0 chr17 38574571 38574842 -50929711 + AluSq SINE Alu 40 313 0 5303 124 30 46 chr17 38574842 38575263 -50929290 + L1MA8 LINE L1 5301 5727 -564 264 30 0 0 chr17 38575263 38575296 -50929257 + (CA)n Simple_repeat Simple_repeat 2 34 0 5303 124 30 46 chr17 38575296 38575601 -50928952 + L1MA8 LINE L1 5727 6084 -207 2233 113 0 0 chr17 38575601 38575912 -50928641 + AluSx SINE Alu 1 311 -1 5303 124 30 46 chr17 38575912 38576106 -50928447 + L1MA8 LINE L1 6084 6279 -12 26 64 0 0 chr17 38576129 38576176 -50928377 + AT_rich Low_complexity Low_complexity 1 47 0 373 288 62 50 chr17 38576672 38576740 -50927813 + MIR SINE MIR 23 89 -173 2204 101 0 3 chr17 38576740 38577038 -50927515 + AluSq SINE Alu 1 297 -16 373 288 62 50 chr17 38577038 38577129 -50927424 + MIR SINE MIR 89 184 -78 1815 150 0 7 chr17 38577137 38577430 -50927123 + AluSx SINE Alu 1 291 -21 270 278 8 75 chr17 38578201 38578334 -50926219 - MIR SINE MIR -38 224 101 1683 113 0 12 chr17 38578695 38578943 -50925610 - AluSq SINE Alu -19 294 50 2120 105 0 0 chr17 38579171 38579466 -50925087 - AluSg SINE Alu -15 295 1 347 227 13 0 chr17 38579582 38579657 -50924896 + MIR SINE MIR 30 105 -157 293 325 62 53 chr17 38579684 38579707 -50924846 - L2 LINE L2 -458 2856 2835 2103 111 14 0 chr17 38579707 38579996 -50924557 + AluSx SINE Alu 1 293 -19 293 325 62 53 chr17 38579996 38580181 -50924372 - L2 LINE L2 -479 2835 2646 3094 61 3 3 chr17 38581090 38581482 -50923071 + L1PA6 LINE L1 5751 6142 -12 2179 113 3 0 chr17 38582022 38582324 -50922229 - AluSx SINE Alu -9 303 1 1017 126 0 0 chr17 38582432 38582583 -50921970 + AluSg/x SINE Alu 158 308 -2 1698 118 99 0 chr17 38582951 38583223 -50921330 - AluSx SINE Alu -13 299 1 201 346 52 47 chr17 38583371 38583582 -50920971 - MIR SINE MIR -48 214 3 2269 90 3 6 chr17 38583612 38583923 -50920630 - AluSq SINE Alu -3 310 1 472 333 13 0 chr17 38585365 38585518 -50919035 + MIR SINE MIR 51 205 -57 2020 104 7 3 chr17 38585537 38585825 -50918728 - AluSg SINE Alu -21 289 1 929 162 0 0 chr17 38585975 38586129 -50918424 - FRAM SINE Alu -14 162 9 2188 106 0 3 chr17 38586135 38586437 -50918116 - AluSc SINE Alu -8 301 1 356 278 56 28 chr17 38586448 38586592 -50917961 - L1MCa LINE L1 -4361 2065 1918 * 427 246 8 54 chr17 38586513 38586643 -50917910 + L1MCa LINE L1 1941 2064 -4362 694 147 0 59 chr17 38586646 38586782 -50917771 - FLAM_C SINE Alu -5 128 1 2111 107 33 0 chr17 38587071 38587371 -50917182 - AluSx SINE Alu -2 310 1 470 304 164 0 chr17 38587713 38587927 -50916626 - MIR SINE MIR -12 250 2 1338 188 7 18 chr17 38588629 38588905 -50915648 - AluJb SINE Alu -39 273 1 2100 123 3 0 chr17 38589040 38589341 -50915212 + AluSx SINE Alu 1 302 -10 2048 122 0 0 chr17 38589368 38589656 -50914897 + AluSg SINE Alu 1 288 -22 1890 149 13 0 chr17 38589669 38589971 -50914582 + AluJb SINE Alu 1 306 -6 2004 131 0 0 chr17 38590178 38590476 -50914077 - AluSx SINE Alu -14 298 1 22 0 0 0 chr17 38590485 38590507 -50914046 + AT_rich Low_complexity Low_complexity 1 22 0 2026 135 0 3 chr17 38591300 38591596 -50912957 - AluSx SINE Alu -17 295 1 608 253 69 6 chr17 38591602 38591776 -50912777 - L2 LINE L2 -607 2707 2523 313 223 9 107 chr17 38592181 38592293 -50912260 + MIR SINE MIR 88 188 -74 1280 84 0 0 chr17 38592635 38592802 -50911751 - AluSg SINE Alu -143 167 1 1728 138 17 27 chr17 38592935 38593231 -50911322 + AluSx SINE Alu 1 293 -19 1132 127 0 0 chr17 38593735 38593901 -50910652 - AluSg/x SINE Alu -16 294 129 195 42 0 0 chr17 38593901 38593925 -50910628 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2151 96 0 0 chr17 38593925 38594205 -50910348 - AluSc SINE Alu -28 281 2 244 261 0 29 chr17 38594413 38594482 -50910071 + GA-rich Low_complexity Low_complexity 2 68 0 381 250 183 8 chr17 38594515 38594635 -50909918 + L1MC4a LINE L1 5504 5644 -2164 632 184 7 174 chr17 38594758 38594859 -50909694 + L1MC4a LINE L1 5681 5797 -2011 2382 73 0 0 chr17 38594859 38595159 -50909394 + AluY SINE Alu 1 300 -11 632 184 7 174 chr17 38595159 38595300 -50909253 + L1MC4a LINE L1 5797 5870 -1938 1920 142 0 0 chr17 38595300 38595639 -50908914 + AluSx SINE Alu 1 339 0 632 184 7 174 chr17 38595639 38595687 -50908866 + L1MC4a LINE L1 5870 5924 -1884 331 224 56 93 chr17 38595725 38595886 -50908667 + HAL1 LINE L1 2353 2507 0 2014 125 7 0 chr17 38595890 38596195 -50908358 + AluSx SINE Alu 1 307 -5 266 200 21 14 chr17 38596243 38596324 -50908229 - MIR3 SINE MIR -7 201 89 7493 18 0 0 chr17 38596347 38597192 -50907361 - L1PA3 LINE L1 0 6155 5311 916 26 0 8 chr17 38597187 38597304 -50907249 + L1PA3 LINE L1 5214 5329 -817 * 1774 147 3 34 chr17 38597686 38598006 -50906547 - AluJo SINE Alu -2 310 1 313 119 0 0 chr17 38598014 38598056 -50906497 - AluSp/q SINE Alu -30 273 232 1972 129 0 0 chr17 38598076 38598355 -50906198 - AluSq SINE Alu -34 279 1 1979 117 0 3 chr17 38599080 38599409 -50905144 - AluSx SINE Alu 0 328 1 2050 131 3 6 chr17 38599800 38600113 -50904440 - AluSx SINE Alu 0 312 1 201 394 32 21 chr17 38600421 38600515 -50904038 + L3b LINE CR1 1442 1536 -47 456 283 77 73 chr17 38601145 38601289 -50903264 + MIR3 SINE MIR 15 157 -104 2184 92 0 3 chr17 38601289 38601581 -50902972 - AluY SINE Alu -20 291 1 2001 117 7 0 chr17 38601581 38601872 -50902681 - AluSx SINE Alu -19 293 1 456 283 77 73 chr17 38601872 38601931 -50902622 + MIR3 SINE MIR 156 219 -42 2480 74 0 0 chr17 38602199 38602510 -50902043 + AluSp SINE Alu 1 311 -2 800 176 0 0 chr17 38602582 38602707 -50901846 - FLAM_C SINE Alu -16 127 3 245 250 0 44 chr17 38602709 38602777 -50901776 - L2 LINE L2 -1519 1795 1731 1778 159 7 0 chr17 38603240 38603529 -50901024 + AluSx SINE Alu 1 291 -21 2052 97 7 27 chr17 38603607 38603907 -50900646 + AluSg SINE Alu 1 294 -16 526 303 74 6 chr17 38604153 38604328 -50900225 + MIR3 SINE MIR 5 191 -17 2462 60 0 0 chr17 38604353 38604652 -50899901 - AluY SINE Alu -12 299 1 25 0 0 0 chr17 38604706 38604731 -50899822 + AT_rich Low_complexity Low_complexity 1 25 0 610 187 9 0 chr17 38604731 38604838 -50899715 - FLAM_C SINE Alu -25 118 11 2130 112 0 3 chr17 38604854 38605167 -50899386 - AluSx SINE Alu 0 312 1 252 0 0 0 chr17 38605172 38605200 -50899353 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1315 139 0 51 chr17 38605206 38605443 -50899110 - AluSx SINE Alu -24 288 64 367 109 18 0 chr17 38605550 38605605 -50898948 - AluJ/FLAM SINE Alu -245 57 2 323 235 73 59 chr17 38605612 38605748 -50898805 - L1ME3A LINE L1 0 6170 6033 2002 106 14 0 chr17 38605844 38606137 -50898416 + AluSx SINE Alu 1 297 -15 2216 102 0 3 chr17 38606142 38606447 -50898106 + AluSx SINE Alu 1 304 -8 632 177 0 65 chr17 38606489 38606613 -50897940 - FLAM_A SINE Alu -13 129 14 1579 174 13 10 chr17 38606632 38606936 -50897617 - AluJo SINE Alu -7 305 1 1154 261 90 8 chr17 38606969 38607325 -50897228 - L1ME3A LINE L1 -287 5883 5499 2048 136 0 0 chr17 38607540 38607849 -50896704 - AluSq SINE Alu -4 309 1 926 121 0 0 chr17 38607855 38607995 -50896558 - AluSg/x SINE Alu -9 301 162 1944 121 4 7 chr17 38608060 38608361 -50896192 - AluSx SINE Alu 0 301 2 615 267 32 73 chr17 38608460 38608707 -50895846 - MIR SINE MIR -6 256 20 201 178 0 0 chr17 38608882 38608927 -50895626 + T-rich Low_complexity Low_complexity 1 45 0 1944 138 0 0 chr17 38609051 38609342 -50895211 - AluSx SINE Alu -21 291 1 2240 95 0 0 chr17 38609381 38609676 -50894877 + AluSg SINE Alu 1 295 -15 1750 137 50 0 chr17 38610889 38611167 -50893386 + AluSx SINE Alu 1 292 -20 379 98 0 0 chr17 38611535 38611596 -50892957 - Alu SINE Alu 0 300 240 180 111 0 0 chr17 38611698 38611725 -50892828 + (A)n Simple_repeat Simple_repeat 1 27 0 657 148 19 0 chr17 38611726 38611834 -50892719 + AluJo SINE Alu 120 229 -83 193 225 0 157 chr17 38611859 38611897 -50892656 - MER5A DNA MER1_type -108 81 63 2328 59 3 16 chr17 38611897 38612203 -50892350 - AluY SINE Alu -8 303 2 193 225 0 157 chr17 38612203 38612253 -50892300 - MER5A DNA MER1_type -126 63 7 185 269 39 0 chr17 38612439 38612491 -50892062 + L2 LINE L2 3169 3222 -91 2219 133 62 3 chr17 38612627 38612995 -50891558 - MLT1B LTR MaLR 0 390 1 2114 96 7 3 chr17 38613563 38613855 -50890698 + AluSc SINE Alu 6 298 -11 823 172 6 58 chr17 38614209 38614383 -50890170 - FAM SINE Alu -10 165 1 24 0 0 0 chr17 38615451 38615475 -50889078 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 38615578 38615607 -50888946 + GC_rich Low_complexity Low_complexity 1 29 0 2308 109 0 0 chr17 38617357 38617669 -50886884 - AluSx SINE Alu 0 312 1 2319 87 3 0 chr17 38618203 38618489 -50886064 + AluY SINE Alu 2 288 -23 1996 123 13 7 chr17 38618691 38618991 -50885562 - AluSx SINE Alu -10 302 1 2240 92 3 7 chr17 38618996 38619303 -50885250 - AluSp SINE Alu 0 306 1 2184 118 0 0 chr17 38619304 38619601 -50884952 - AluSg SINE Alu -13 297 1 2154 121 13 0 chr17 38619607 38619912 -50884641 - AluSx SINE Alu -3 309 1 1466 188 16 36 chr17 38619926 38620234 -50884319 - AluJo SINE Alu -10 302 1 1815 191 0 0 chr17 38620756 38621050 -50883503 - AluJo SINE Alu -17 295 2 2333 101 10 0 chr17 38621211 38621518 -50883035 - AluSx SINE Alu -2 310 1 1562 166 7 62 chr17 38622128 38622436 -50882117 - AluJb SINE Alu -9 303 13 2314 76 41 0 chr17 38622659 38622949 -50881604 + AluY SINE Alu 1 302 -9 729 162 0 8 chr17 38623025 38623142 -50881411 + FLAM_C SINE Alu 2 117 -26 2162 115 3 13 chr17 38623383 38623696 -50880857 - AluSx SINE Alu -2 310 1 1967 122 7 24 chr17 38623705 38624025 -50880528 - AluSx SINE Alu 0 315 1 2001 102 4 0 chr17 38624064 38624318 -50880235 - AluSp SINE Alu -58 255 1 1105 180 0 0 chr17 38624327 38624510 -50880043 - AluJb SINE Alu -1 311 129 1678 167 26 29 chr17 38624516 38624828 -50879725 - AluJo SINE Alu -1 311 1 303 271 123 0 chr17 38624867 38624989 -50879564 - L1MC3 LINE L1 -447 7338 7202 352 155 18 5 chr17 38624989 38625066 -50879487 + Alu SINE Alu 1 50 -253 2130 58 46 0 chr17 38625217 38625478 -50879075 - AluY SINE Alu -14 297 25 1768 222 97 29 chr17 38625535 38626013 -50878540 - HAL1 LINE L1 -832 1675 1148 1861 115 79 4 chr17 38626013 38626292 -50878261 - AluSx SINE Alu -12 300 1 1768 222 97 29 chr17 38626292 38626399 -50878154 - HAL1 LINE L1 -1359 1148 1050 787 144 0 50 chr17 38626422 38626561 -50877992 - FLAM_C SINE Alu -1 132 1 1226 155 21 10 chr17 38626599 38626793 -50877760 + AluJo SINE Alu 12 207 -105 2290 110 48 20 chr17 38626794 38627148 -50877405 - THE1B LTR MaLR 0 364 1 2483 77 0 0 chr17 38627148 38627458 -50877095 - THE1B-int LTR MaLR 0 1580 1271 2526 72 0 3 chr17 38627458 38627762 -50876791 - AluY SINE Alu -8 303 1 259 214 0 0 chr17 38627763 38627819 -50876734 - L1PA14 LINE L1 -122 6039 5984 1290 103 0 0 chr17 38627849 38628014 -50876539 - AluSg/x SINE Alu -14 298 134 298 101 58 29 chr17 38628014 38628083 -50876470 - L1MD3 LINE L1 -120 7875 7805 774 243 23 0 chr17 38628090 38628263 -50876290 - AluJo SINE Alu -16 296 120 1417 189 8 0 chr17 38628264 38628528 -50876025 - L1MD3 LINE L1 -205 7790 7525 1853 236 153 40 chr17 38628544 38628830 -50875723 - HAL1 LINE L1 -1542 965 713 1999 100 4 0 chr17 38628830 38629090 -50875463 + AluSg SINE Alu 1 261 -49 1853 236 153 40 chr17 38629090 38629588 -50874965 - HAL1 LINE L1 -1794 713 92 2128 121 0 0 chr17 38629590 38629905 -50874648 - AluSx SINE Alu 0 315 1 714 151 0 0 chr17 38629927 38630033 -50874520 - FLAM_C SINE Alu -36 107 2 266 169 0 84 chr17 38630040 38630123 -50874430 + T-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 38630269 38630300 -50874253 + AT_rich Low_complexity Low_complexity 1 31 0 2374 104 0 0 chr17 38630398 38630696 -50873857 - AluSg1 SINE Alu -11 298 1 2366 100 0 0 chr17 38630903 38631204 -50873349 + AluSx SINE Alu 1 301 -11 1718 162 62 3 chr17 38631228 38631518 -50873035 - AluJb SINE Alu -5 307 1 317 247 0 43 chr17 38631655 38631748 -50872805 + L1MC4 LINE L1 6615 6703 -1339 2066 132 7 0 chr17 38631753 38632063 -50872490 - AluSx SINE Alu 0 312 1 2271 114 3 0 chr17 38632484 38632781 -50871772 - AluSx SINE Alu -14 298 1 456 307 129 0 chr17 38632781 38633006 -50871547 + MER112 DNA MER1_type 6 259 -1 878 178 18 6 chr17 38633105 38633268 -50871285 - FAM SINE Alu -13 172 8 451 262 47 52 chr17 38633620 38633792 -50870761 - MER5B DNA MER1_type -1 177 7 242 271 0 17 chr17 38635157 38635216 -50869337 + CT-rich Low_complexity Low_complexity 5 62 0 2184 103 13 19 chr17 38635223 38635534 -50869019 - AluSx SINE Alu -3 309 1 240 75 0 0 chr17 38635562 38635602 -50868951 - AluSx SINE Alu 0 300 261 1705 84 14 5 chr17 38635602 38635815 -50868738 - AluSx SINE Alu -97 215 1 401 93 0 0 chr17 38635815 38635869 -50868684 - AluSp SINE Alu -184 129 76 553 41 27 0 chr17 38635944 38636017 -50868536 - AluSc SINE Alu -11 298 224 2337 78 0 0 chr17 38636033 38636372 -50868181 - AluY SINE Alu 0 339 1 1810 172 3 0 chr17 38636435 38636725 -50867828 + AluJo SINE Alu 1 291 -21 1359 143 22 36 chr17 38636745 38636969 -50867584 - AluJo SINE Alu -8 304 84 663 179 46 33 chr17 38637049 38637200 -50867353 - MER5A DNA MER1_type -34 155 3 2701 61 0 0 chr17 38637501 38637827 -50866726 - LTR17 LTR ERV1 -454 326 1 28735 45 7 6 chr17 38637827 38641229 -50863324 - HERV17 LTR ERV1 0 8626 5220 2298 97 7 3 chr17 38641249 38641549 -50863004 - AluSx SINE Alu -11 301 1 797 176 0 0 chr17 38641555 38641686 -50862867 - FLAM_C SINE Alu 0 133 3 28 0 0 0 chr17 38641842 38641870 -50862683 + AT_rich Low_complexity Low_complexity 1 28 0 633 75 11 11 chr17 38641946 38642040 -50862513 - L1PA7 LINE L1 0 6154 6061 25 0 0 0 chr17 38642263 38642288 -50862265 + AT_rich Low_complexity Low_complexity 1 25 0 1822 149 3 50 chr17 38642335 38642471 -50862082 + AluJo SINE Alu 1 142 -170 2291 115 0 0 chr17 38642471 38642767 -50861786 + AluSg1 SINE Alu 1 296 -13 2161 77 33 0 chr17 38642769 38643088 -50861465 + AluY SINE Alu 1 328 0 1822 149 3 50 chr17 38643088 38643268 -50861285 + AluJo SINE Alu 143 306 -6 2347 104 0 3 chr17 38644205 38644513 -50860040 - AluSg SINE Alu -3 307 1 1989 167 0 3 chr17 38644515 38644815 -50859738 - AluSx SINE Alu -13 299 1 397 253 99 43 chr17 38645209 38645371 -50859182 - MER5B DNA MER1_type 0 178 8 180 0 0 0 chr17 38645722 38645742 -50858811 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 828 118 0 8 chr17 38645769 38645888 -50858665 - FLAM_C SINE Alu -15 118 1 297 277 106 0 chr17 38645899 38645993 -50858560 - MIR SINE MIR -67 141 38 337 303 108 32 chr17 38646223 38646408 -50858145 + MER20 DNA MER1_type 16 214 -5 259 270 112 11 chr17 38646906 38646995 -50857558 + MIR3 SINE MIR 67 164 -44 2342 103 7 0 chr17 38647317 38647627 -50856926 - AluSx SINE Alu 0 312 1 2202 92 18 0 chr17 38647627 38647909 -50856644 - AluSp SINE Alu -13 300 14 2041 142 7 3 chr17 38647948 38648250 -50856303 - AluSx SINE Alu -9 303 1 840 158 0 43 chr17 38648517 38648656 -50855897 + FLAM_C SINE Alu 1 133 0 180 111 0 0 chr17 38649591 38649618 -50854935 + (A)n Simple_repeat Simple_repeat 1 27 0 1148 92 0 92 chr17 38649802 38649967 -50854586 - AluSq SINE Alu -15 298 152 2322 81 7 0 chr17 38649967 38650262 -50854291 - AluSg SINE Alu -13 297 1 1148 92 0 92 chr17 38650262 38650291 -50854262 - AluSq SINE Alu -161 152 122 2125 77 0 61 chr17 38650318 38650499 -50854054 - AluSq SINE Alu -3 310 119 2345 80 3 17 chr17 38650499 38650801 -50853752 - AluSp SINE Alu -15 298 1 2266 97 3 0 chr17 38650811 38651100 -50853453 - AluSp SINE Alu -23 290 1 2125 77 0 61 chr17 38651100 38651217 -50853336 - AluSq SINE Alu -203 110 20 1627 179 31 7 chr17 38651579 38651870 -50852683 - AluJo SINE Alu -12 300 3 3491 196 26 55 chr17 38651889 38652740 -50851813 - LTR1B LTR ERV1 0 826 1 2227 65 29 59 chr17 38653225 38653405 -50851148 - AluSg SINE Alu -13 297 128 2414 77 3 6 chr17 38653405 38653717 -50850836 - AluY SINE Alu 0 311 1 2227 65 29 59 chr17 38653717 38653842 -50850711 - AluSg SINE Alu -182 128 1 487 220 143 82 chr17 38654089 38654216 -50850337 - MIR SINE MIR 0 262 144 2345 112 0 0 chr17 38654216 38654520 -50850033 - AluSx SINE Alu -8 304 1 487 220 143 82 chr17 38654520 38654637 -50849916 - MIR SINE MIR -118 144 3 2269 95 3 3 chr17 38654662 38654956 -50849597 - AluSx SINE Alu -18 294 1 1748 152 24 17 chr17 38655051 38655208 -50849345 - AluJo SINE Alu -21 291 137 207 0 0 0 chr17 38655208 38655231 -50849322 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2191 102 0 3 chr17 38655231 38655514 -50849039 - AluSg1 SINE Alu -27 282 1 1748 152 24 17 chr17 38655514 38655644 -50848909 - AluJo SINE Alu -174 138 1 349 209 77 0 chr17 38655772 38655863 -50848690 - L1ME4a LINE L1 -152 5969 5872 2192 110 7 16 chr17 38656644 38656953 -50847600 + AluSx SINE Alu 1 306 -6 305 254 81 42 chr17 38657560 38657612 -50846941 - L1ME4a LINE L1 -11 6110 6061 1735 121 94 0 chr17 38657612 38657877 -50846676 - AluSg SINE Alu -20 290 1 305 254 81 42 chr17 38657877 38658084 -50846469 - L1ME4a LINE L1 -60 6061 5841 2044 129 14 3 chr17 38658091 38658386 -50846167 - AluJb SINE Alu -14 298 1 1615 127 4 0 chr17 38658386 38658623 -50845930 - L1M1 LINE L1 -562 5738 5501 303 28 0 0 chr17 38658839 38658875 -50845678 + (TG)n Simple_repeat Simple_repeat 2 37 0 3381 221 53 14 chr17 38659042 38659799 -50844754 + MER21B LTR ERV1 1 786 -77 2590 65 3 0 chr17 38659916 38660222 -50844331 + AluSp SINE Alu 1 307 -6 2125 134 0 10 chr17 38660230 38660537 -50844016 + AluSx SINE Alu 1 304 -8 314 339 20 0 chr17 38660538 38660659 -50843894 + MER5A DNA MER1_type 59 177 -1 263 157 20 0 chr17 38660664 38660715 -50843838 + MIR SINE MIR 206 257 -5 2499 67 10 0 chr17 38660773 38661070 -50843483 + AluY SINE Alu 1 300 -11 3492 91 5 89 chr17 38661108 38661736 -50842817 - L1MA3 LINE L1 -477 5828 5254 1133 82 58 18 chr17 38661855 38662026 -50842527 - L1PA11 LINE L1 0 6174 5997 829 167 0 0 chr17 38662300 38662426 -50842127 - FLAM_C SINE Alu -6 127 2 467 244 111 29 chr17 38662622 38662794 -50841759 - MIR SINE MIR -12 250 65 746 181 8 16 chr17 38663071 38663198 -50841355 - FLAM_C SINE Alu -3 130 5 1325 119 0 0 chr17 38663273 38663450 -50841103 - AluSg/x SINE Alu -3 307 131 237 108 0 0 chr17 38663721 38663758 -50840795 + (TG)n Simple_repeat Simple_repeat 2 38 0 1316 297 134 32 chr17 38663866 38664349 -50840204 + L2 LINE L2 1670 2102 -1212 2248 115 3 3 chr17 38664349 38664661 -50839892 - AluSx SINE Alu 0 312 1 1316 297 134 32 chr17 38664661 38665078 -50839475 + L2 LINE L2 2102 2662 -652 1570 178 56 3 chr17 38665116 38665403 -50839150 - AluJo SINE Alu -10 302 1 411 287 161 40 chr17 38665442 38665847 -50838706 + L2 LINE L2 2833 3301 -12 1626 181 22 35 chr17 38665847 38666161 -50838392 + AluJo SINE Alu 1 310 -2 411 287 161 40 chr17 38666161 38666176 -50838377 + L2 LINE L2 3301 3313 0 1765 144 4 0 chr17 38666267 38666517 -50838036 - AluSx SINE Alu -61 251 1 638 256 74 7 chr17 38666545 38666830 -50837723 - L1M4 LINE L1 -2659 3487 3184 913 212 99 0 chr17 38666876 38667178 -50837375 - L1M4 LINE L1 -3170 2976 2645 1748 167 28 11 chr17 38667284 38667597 -50836956 + AluSx SINE Alu 1 312 0 1634 236 75 8 chr17 38667603 38668120 -50836433 + L1ME3 LINE L1 5307 5858 -312 2014 126 7 10 chr17 38668174 38668468 -50836085 + AluSx SINE Alu 1 293 -19 880 243 22 29 chr17 38668473 38668786 -50835767 + L1ME3 LINE L1 5851 6161 -1 356 267 27 63 chr17 38668804 38668962 -50835591 + L1M4b LINE L1 11 173 -6682 2590 61 0 0 chr17 38668962 38669273 -50835280 + AluY SINE Alu 1 311 0 356 267 27 63 chr17 38669273 38669395 -50835158 + L1M4b LINE L1 173 548 -6307 725 220 26 137 chr17 38669809 38670195 -50834358 + L1M4b LINE L1 1207 1549 -5310 825 164 16 0 chr17 38670222 38670350 -50834203 - AluJb SINE Alu -178 134 5 2333 62 21 0 chr17 38670364 38670655 -50833898 - AluSp SINE Alu -16 297 1 1131 178 182 16 chr17 38670712 38670970 -50833583 + AluJo SINE Alu 2 302 0 3491 154 22 110 chr17 38671023 38671298 -50833255 + L1MB8 LINE L1 5351 5649 -529 2298 99 0 0 chr17 38671298 38671592 -50832961 - AluSx SINE Alu -18 294 1 3491 154 22 110 chr17 38671592 38672074 -50832479 + L1MB8 LINE L1 5649 6017 -161 814 129 8 16 chr17 38672074 38672198 -50832355 + FLAM_A SINE Alu 1 123 -10 3491 154 22 110 chr17 38672198 38672347 -50832206 + L1MB8 LINE L1 6017 6178 0 1603 233 18 100 chr17 38672332 38672575 -50831978 + L1M4 LINE L1 4257 4518 -1628 * 499 145 36 0 chr17 38672575 38672658 -50831895 + AluSx SINE Alu 1 86 -226 2429 68 0 23 chr17 38672658 38672965 -50831588 + AluSq SINE Alu 1 300 -13 1565 114 21 13 chr17 38672963 38673200 -50831353 + AluSx SINE Alu 71 309 -1 1603 233 18 100 chr17 38672965 38673581 -50830972 + L1M4 LINE L1 4516 4871 -1275 1528 158 24 20 chr17 38676514 38676761 -50827792 - AluJo SINE Alu -63 249 2 816 193 13 0 chr17 38677046 38677196 -50827357 + FRAM SINE Alu 1 152 -14 341 235 0 9 chr17 38677269 38677314 -50827239 + (TA)n Simple_repeat Simple_repeat 1 45 -69 2102 109 0 36 chr17 38677314 38677617 -50826936 + AluSq SINE Alu 1 292 -21 341 235 0 9 chr17 38677617 38677686 -50826867 + (TA)n Simple_repeat Simple_repeat 45 114 0 2364 93 3 0 chr17 38677707 38678008 -50826545 - AluSp SINE Alu -11 302 1 2039 131 0 0 chr17 38678151 38678434 -50826119 + AluSx SINE Alu 1 283 -29 864 144 40 46 chr17 38678442 38678563 -50825990 + MLT1A1 LTR MaLR 29 150 -215 2476 69 0 0 chr17 38678563 38678866 -50825687 + AluY SINE Alu 1 303 -8 864 144 40 46 chr17 38678866 38678917 -50825636 + MLT1A1 LTR MaLR 150 200 -165 1279 150 21 91 chr17 38678921 38679207 -50825346 + MER51B LTR ERV1 5 270 -107 2267 98 0 16 chr17 38679209 38679525 -50825028 - AluY SINE Alu 0 311 1 960 140 0 0 chr17 38679525 38679661 -50824892 - AluSq/x SINE Alu -177 136 1 786 105 0 8 chr17 38679661 38679785 -50824768 + MER51A LTR ERV1 512 634 0 1048 90 34 40 chr17 38679785 38679962 -50824591 + MER51A-int LTR ERV1 1 176 -7640 3151 153 10 17 chr17 38679976 38680553 -50824000 + MER51A-int LTR ERV1 418 990 -6826 * 7971 112 10 26 chr17 38680540 38681328 -50823225 + MER51A-int LTR ERV1 1093 1892 -5924 2152 123 10 0 chr17 38681328 38681628 -50822925 + AluSx SINE Alu 1 303 -9 7971 112 10 26 chr17 38681628 38682291 -50822262 + MER51A-int LTR ERV1 1892 2522 -5294 1954 142 0 26 chr17 38682291 38682594 -50821959 - AluSx SINE Alu -17 295 1 1097 94 62 168 chr17 38683566 38683692 -50820861 - MER30 DNA MER1_type -1 229 91 2397 82 3 3 chr17 38683692 38683995 -50820558 + AluSp SINE Alu 1 303 -10 258 32 0 0 chr17 38684005 38684036 -50820517 + (TG)n Simple_repeat Simple_repeat 2 32 0 1097 94 62 168 chr17 38684036 38684066 -50820487 - MER30 DNA MER1_type -148 82 50 2277 106 3 3 chr17 38684066 38684369 -50820184 - AluSc SINE Alu -3 306 4 1097 94 62 168 chr17 38684369 38684456 -50820097 - MER30 DNA MER1_type -180 50 1 679 255 115 17 chr17 38684534 38684769 -50819784 + MIR SINE MIR 2 259 -3 2092 137 0 3 chr17 38684825 38685117 -50819436 + AluSx SINE Alu 1 291 -21 286 249 18 203 chr17 38685119 38685445 -50819108 - L2 LINE L2 -14 3258 2993 2368 98 3 0 chr17 38685887 38686192 -50818361 - AluSx SINE Alu -5 307 2 239 143 0 0 chr17 38686220 38686262 -50818291 - L1ME1 LINE L1 -5 6161 6120 1712 170 3 3 chr17 38686276 38686558 -50817995 - AluJo SINE Alu -30 282 1 899 229 124 8 chr17 38686558 38686825 -50817728 - L1ME1 LINE L1 -33 6133 5836 27 62 0 0 chr17 38686905 38686953 -50817600 + AT_rich Low_complexity Low_complexity 1 48 0 253 244 35 12 chr17 38687085 38687171 -50817382 + MIR SINE MIR 41 128 -80 2148 112 0 37 chr17 38687404 38687726 -50816827 - AluSx SINE Alu -2 310 1 535 269 216 36 chr17 38688110 38688782 -50815771 - LTR50 LTR ERVL -2 793 1 326 259 80 27 chr17 38688787 38688899 -50815654 - MIR SINE MIR -111 151 34 494 175 44 88 chr17 38688903 38688986 -50815567 - MER104 DNA Tc2 -1719 179 103 2101 122 7 0 chr17 38688986 38689282 -50815271 + AluSx SINE Alu 1 298 -14 494 175 44 88 chr17 38689282 38689335 -50815218 - MER104 DNA Tc2 -1795 103 49 1562 188 3 58 chr17 38689335 38689644 -50814909 - AluJb SINE Alu -20 292 1 351 336 21 21 chr17 38689723 38689866 -50814687 - L2 LINE L2 -952 2362 2220 826 141 16 8 chr17 38690594 38690722 -50813831 + FRAM SINE Alu 26 154 -22 2643 142 19 12 chr17 38692722 38693145 -50811408 - MSTB LTR MaLR 0 426 1 191 337 36 0 chr17 38693177 38693260 -50811293 + MIR SINE MIR 104 189 -73 2265 114 0 0 chr17 38693292 38693590 -50810963 - AluSc SINE Alu -11 298 1 315 256 84 110 chr17 38693747 38693817 -50810736 - L2 LINE L2 -167 3105 3035 2130 133 7 0 chr17 38693817 38694125 -50810428 + AluSx SINE Alu 1 310 -2 315 256 84 110 chr17 38694125 38694245 -50810308 - L2 LINE L2 -237 3035 2920 360 0 0 0 chr17 38694413 38694453 -50810100 + (TG)n Simple_repeat Simple_repeat 2 41 0 385 224 79 33 chr17 38694454 38694606 -50809947 - L1MC5 LINE L1 -58 7903 7745 1936 172 7 0 chr17 38694677 38694985 -50809568 + AluJb SINE Alu 1 310 -2 24 67 0 0 chr17 38695286 38695331 -50809222 + AT_rich Low_complexity Low_complexity 1 45 0 1069 91 0 0 chr17 38695379 38695522 -50809031 - AluSg/x SINE Alu -36 276 134 2041 84 13 58 chr17 38695522 38695831 -50808722 - AluSc SINE Alu -14 295 1 995 73 0 48 chr17 38696025 38696182 -50808371 - L1PA8A LINE L1 -657 5474 5324 911 86 0 0 chr17 38696182 38696297 -50808256 + L1PA10 LINE L1 6033 6149 -19 22 35 0 0 chr17 38696317 38696346 -50808207 + AT_rich Low_complexity Low_complexity 1 29 0 279 218 274 24 chr17 38696404 38696528 -50808025 + MIR SINE MIR 88 242 -20 2356 91 0 3 chr17 38699660 38699967 -50804586 - AluSg1 SINE Alu -2 307 2 262 119 0 0 chr17 38701133 38701175 -50803378 + U5 snRNA snRNA 1 42 -74 1937 151 3 0 chr17 38702824 38703122 -50801431 - AluSx SINE Alu -13 299 1 2023 141 0 7 chr17 38703205 38703496 -50801057 - AluSx SINE Alu -23 289 1 2514 71 3 0 chr17 38703639 38703948 -50800605 - AluSp SINE Alu -1 312 3 378 169 0 36 chr17 38704064 38704147 -50800406 + MER116 DNA Mariner 1 80 0 22 0 0 0 chr17 38704520 38704542 -50800011 + AT_rich Low_complexity Low_complexity 1 22 0 1991 156 22 22 chr17 38705510 38705876 -50798677 + MER47A DNA MER2_type 1 366 0 641 246 0 0 chr17 38705910 38706036 -50798517 + FLAM_C SINE Alu 1 126 -17 338 297 128 65 chr17 38706352 38706417 -50798136 + L1MEd LINE L1 18 77 -6042 372 104 0 0 chr17 38706417 38706484 -50798069 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 338 297 128 65 chr17 38706484 38706785 -50797768 + L1MEd LINE L1 77 407 -5712 243 261 138 15 chr17 38706997 38707192 -50797361 + L1MEd LINE L1 730 948 -5171 1734 137 0 0 chr17 38707195 38707436 -50797117 + AluSg/x SINE Alu 69 309 -1 630 175 0 0 chr17 38707501 38707598 -50796955 + FRAM SINE Alu 41 137 -39 554 235 55 51 chr17 38707719 38708098 -50796455 + MLT1H LTR MaLR 206 549 0 2244 116 0 0 chr17 38708752 38709054 -50795499 - AluSx SINE Alu -10 302 1 219 69 0 0 chr17 38709451 38709480 -50795073 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 469 287 53 62 chr17 38709526 38709867 -50794686 + MLT1H-int LTR MaLR 1033 1370 -1 1438 209 100 60 chr17 38709870 38710382 -50794171 + MLT1H LTR MaLR 3 534 -15 507 270 58 109 chr17 38710390 38710875 -50793678 + L1MEd LINE L1 1056 1556 -4614 1991 169 0 0 chr17 38712156 38712463 -50792090 + AluJb SINE Alu 1 307 -5 233 188 29 58 chr17 38712464 38712533 -50792020 - MLT1J LTR MaLR -50 461 395 993 220 0 0 chr17 38712551 38712737 -50791816 + MER58A DNA MER1_type 39 224 0 609 307 49 22 chr17 38712781 38713048 -50791505 - MLT1J LTR MaLR -237 274 1 335 235 39 89 chr17 38714239 38714418 -50790135 - MLT1J LTR MaLR 0 511 342 252 86 0 0 chr17 38714418 38714453 -50790100 + (TTTTC)n Simple_repeat Simple_repeat 4 38 0 2334 112 0 13 chr17 38714582 38714895 -50789658 + AluSx SINE Alu 1 309 -3 306 0 0 0 chr17 38714895 38714929 -50789624 + (TA)n Simple_repeat Simple_repeat 2 35 0 2263 106 0 7 chr17 38714997 38715298 -50789255 + AluSx SINE Alu 1 299 -13 474 124 56 0 chr17 38717845 38717934 -50786619 - L1MA8 LINE L1 -127 6164 6071 23 0 0 0 chr17 38717942 38717965 -50786588 + AT_rich Low_complexity Low_complexity 1 23 0 22 43 0 21 chr17 38718431 38718447 -50786106 + AT_rich Low_complexity Low_complexity 1 16 -30 1598 172 56 0 chr17 38718447 38718714 -50785839 - AluJo SINE Alu -30 282 1 22 43 0 21 chr17 38718714 38718744 -50785809 + AT_rich Low_complexity Low_complexity 16 46 0 616 300 39 39 chr17 38718926 38719134 -50785419 + MER102b DNA MER1_type 2 213 -1215 2174 107 0 0 chr17 38719134 38719450 -50785103 + AluSq SINE Alu 3 318 0 616 300 39 39 chr17 38719450 38719570 -50784983 + MER102b DNA MER1_type 212 331 -10 307 189 278 0 chr17 38719906 38719996 -50784557 + L2 LINE L2 3195 3309 -4 1342 97 0 38 chr17 38720060 38720246 -50784307 - AluSg/x SINE Alu -12 298 120 1124 115 6 0 chr17 38720321 38720477 -50784076 - AluSq SINE Alu -156 157 1 565 273 90 100 chr17 38720482 38720782 -50783771 - L2 LINE L2 0 3272 2976 303 187 53 0 chr17 38721353 38721428 -50783125 + L1ME2 LINE L1 6085 6166 0 2457 70 0 13 chr17 38721756 38722069 -50782484 - AluY SINE Alu -2 309 1 2414 77 0 6 chr17 38724124 38724435 -50780118 - AluY SINE Alu -2 309 1 2199 108 0 0 chr17 38724533 38724821 -50779732 - AluSc SINE Alu -21 288 1 249 284 91 51 chr17 38724827 38725020 -50779533 - L1MC4a LINE L1 -1639 6169 5958 2333 121 8 30 chr17 38725020 38725392 -50779161 - THE1B LTR MaLR 0 364 1 249 284 91 51 chr17 38725392 38725494 -50779059 - L1MC4a LINE L1 -1850 5958 5862 4176 168 14 1 chr17 38725548 38726330 -50778223 + L1MB2 LINE L1 5380 6171 0 257 228 0 0 chr17 38726382 38726439 -50778114 - L1MC4a LINE L1 -2059 5749 5693 2181 115 3 0 chr17 38727511 38727807 -50776746 + AluSp SINE Alu 1 297 -16 286 184 58 46 chr17 38727834 38727921 -50776632 + MIR SINE MIR 173 260 -2 332 307 118 0 chr17 38727966 38728093 -50776460 - L1MC/D LINE L1 -1988 5820 5679 1536 175 6 60 chr17 38728445 38728760 -50775793 + AluJo SINE Alu 1 298 -14 564 326 72 48 chr17 38729004 38729630 -50774923 - L2 LINE L2 -183 3089 2439 2067 126 0 17 chr17 38730797 38731099 -50773454 - AluSg SINE Alu -13 297 1 768 161 0 8 chr17 38731178 38731302 -50773251 + AluJo SINE Alu 13 135 -177 986 208 127 9 chr17 38731343 38731555 -50772998 - MER8 DNA MER2_type -1 238 2 2078 93 11 0 chr17 38732143 38732423 -50772130 - AluSc SINE Alu -26 283 1 207 0 0 0 chr17 38732424 38732447 -50772106 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1722 171 0 11 chr17 38732447 38732734 -50771819 - AluJo SINE Alu -28 284 1 21 0 0 0 chr17 38733446 38733467 -50771086 + AT_rich Low_complexity Low_complexity 1 21 0 1874 159 0 7 chr17 38733467 38733757 -50770796 - AluJb SINE Alu -24 288 1 258 125 0 0 chr17 38733887 38733935 -50770618 - MADE1 DNA Mariner 0 80 33 264 30 0 0 chr17 38733950 38733983 -50770570 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1767 180 0 7 chr17 38733985 38734269 -50770284 - AluJb SINE Alu -30 282 1 2636 269 61 45 chr17 38735374 38736051 -50768502 + L1ME3A LINE L1 3712 4377 -1793 1796 181 3 7 chr17 38736051 38736338 -50768215 + AluJo SINE Alu 1 286 -26 2636 269 61 45 chr17 38736338 38737140 -50767413 + L1ME3A LINE L1 4377 5165 -1005 1727 152 4 4 chr17 38737140 38737410 -50767143 + AluJo SINE Alu 21 290 -22 2636 269 61 45 chr17 38737410 38738098 -50766455 + L1ME3A LINE L1 5165 5956 -214 2053 145 0 19 chr17 38738320 38738638 -50765915 - AluSx SINE Alu 0 312 1 221 226 38 19 chr17 38739600 38739653 -50764900 - L3 LINE CR1 -1 1576 1523 598 227 0 111 chr17 38739765 38739937 -50764616 - MIR3 SINE MIR -55 153 1 308 75 0 38 chr17 38742263 38742316 -50762237 + (GGA)n Simple_repeat Simple_repeat 1 51 0 215 139 28 0 chr17 38742659 38742695 -50761858 + CT-rich Low_complexity Low_complexity 1 37 0 739 163 0 57 chr17 38743948 38744089 -50760464 - FLAM_C SINE Alu 0 133 1 2275 91 3 0 chr17 38744745 38745074 -50759479 - AluSp SINE Alu 0 330 1 2072 95 33 0 chr17 38745081 38745394 -50759159 - AluSp SINE Alu 0 322 1 2320 64 0 0 chr17 38745580 38745887 -50758666 + AluY SINE Alu 2 308 0 2446 47 0 3 chr17 38746023 38746320 -50758233 - AluY SINE Alu -15 296 1 198 0 0 0 chr17 38746951 38746973 -50757580 + (A)n Simple_repeat Simple_repeat 1 22 0 2528 31 27 0 chr17 38747301 38747593 -50756960 - AluY SINE Alu -11 300 1 908 143 0 0 chr17 38747617 38747750 -50756803 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr17 38748210 38748231 -50756322 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr17 38750189 38750215 -50754338 + (TA)n Simple_repeat Simple_repeat 1 26 0 2228 116 0 7 chr17 38750959 38751260 -50753293 - AluSx SINE Alu -11 301 3 584 159 44 9 chr17 38751352 38751465 -50753088 - MIR SINE MIR -41 221 105 521 252 189 9 chr17 38752132 38752315 -50752238 - MIR SINE MIR -44 218 3 33 0 0 0 chr17 38752690 38752723 -50751830 + AT_rich Low_complexity Low_complexity 1 33 0 186 133 0 0 chr17 38755190 38755220 -50749333 + (TTA)n Simple_repeat Simple_repeat 2 31 0 206 141 76 22 chr17 38755442 38755534 -50749019 + (TA)n Simple_repeat Simple_repeat 2 98 0 1237 219 131 88 chr17 38755582 38756286 -50748267 - MER21B LTR ERV1 -124 739 6 231 345 86 29 chr17 38756527 38756666 -50747887 - MER5B DNA MER1_type -30 148 2 1235 179 77 3 chr17 38756676 38756973 -50747580 - MER33 DNA MER1_type 0 324 6 478 218 148 0 chr17 38757286 38757387 -50747166 - FLAM_A SINE Alu -16 117 2 2410 77 0 0 chr17 38757424 38757724 -50746829 - AluY SINE Alu 0 311 12 2150 115 10 0 chr17 38757903 38758207 -50746346 - AluSp SINE Alu -6 307 1 234 62 0 0 chr17 38758325 38758357 -50746196 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 225 0 0 0 chr17 38758978 38759003 -50745550 + (CA)n Simple_repeat Simple_repeat 2 26 0 301 115 16 16 chr17 38759003 38759064 -50745489 + (TG)n Simple_repeat Simple_repeat 2 62 0 1698 176 40 17 chr17 38761815 38761999 -50742554 - AluJb SINE Alu -3 309 114 309 51 0 0 chr17 38761999 38762038 -50742515 + (TG)n Simple_repeat Simple_repeat 2 40 0 1698 176 40 17 chr17 38762038 38762155 -50742398 - AluJb SINE Alu -198 114 1 2845 248 178 52 chr17 38812187 38813437 -50691116 + L2 LINE L2 695 2102 -1212 271 214 0 0 chr17 38813444 38813500 -50691053 + L1ME1 LINE L1 6019 6074 -92 234 222 0 0 chr17 38815436 38815490 -50689063 + A-rich Low_complexity Low_complexity 1 54 0 1592 187 3 7 chr17 38816857 38817157 -50687396 + AluJo SINE Alu 1 299 -13 1349 213 61 36 chr17 38817157 38817518 -50687035 + L1ME2 LINE L1 5786 6155 -9 1617 169 0 60 chr17 38817528 38817842 -50686711 - AluJo SINE Alu -17 295 1 2221 112 0 0 chr17 38817864 38818160 -50686393 - AluSx SINE Alu -16 296 1 1189 35 0 21 chr17 38818959 38819103 -50685450 - L1PA4 LINE L1 0 6155 6015 256 304 32 40 chr17 38820863 38820988 -50683565 - L3b LINE CR1 -136 1447 1324 234 255 0 0 chr17 38821260 38821307 -50683246 - MIR SINE MIR -147 115 69 319 284 0 0 chr17 38821507 38821602 -50682951 - AluSp/q SINE Alu 0 303 209 1038 269 60 3 chr17 38821689 38821972 -50682581 - AluSc SINE Alu 0 299 1 270 0 0 0 chr17 38822131 38822161 -50682392 + (TG)n Simple_repeat Simple_repeat 2 31 0 1693 172 40 17 chr17 38824912 38825096 -50679457 - AluJb SINE Alu -3 309 114 309 51 0 0 chr17 38825096 38825135 -50679418 + (TG)n Simple_repeat Simple_repeat 2 40 0 1693 172 40 17 chr17 38825135 38825252 -50679301 - AluJb SINE Alu -198 114 1 895 153 0 44 chr17 38825497 38825634 -50678919 + FLAM_C SINE Alu 1 131 -2 25 0 0 0 chr17 38827704 38827729 -50676824 + AT_rich Low_complexity Low_complexity 1 25 0 275 322 17 9 chr17 38830121 38830236 -50674317 + GA-rich Low_complexity Low_complexity 1 116 0 903 159 8 0 chr17 38831102 38831234 -50673319 - FLAM_C SINE Alu 0 133 1 405 234 51 51 chr17 38831246 38831263 -50673290 - L1MA10 LINE L1 -3 6331 6315 2277 198 110 15 chr17 38831263 38831848 -50672705 - L1ME1 LINE L1 -5 6161 5432 2324 93 0 10 chr17 38831848 38832158 -50672395 + AluSc SINE Alu 1 307 -2 2277 198 110 15 chr17 38832158 38832389 -50672164 - L1ME1 LINE L1 -734 5432 5224 220 267 178 0 chr17 38832628 38832729 -50671824 + L2 LINE L2 3176 3294 -19 425 319 97 14 chr17 38835223 38835439 -50669114 + L3 LINE CR1 1342 1575 -2 22 0 0 0 chr17 38835500 38835522 -50669031 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr17 38835563 38835606 -50668947 + AT_rich Low_complexity Low_complexity 1 43 0 768 148 47 54 chr17 38836628 38836777 -50667776 - AluJo SINE Alu -159 153 6 248 313 84 0 chr17 38836808 38836891 -50667662 - MIR SINE MIR -108 154 65 2246 109 3 0 chr17 38836908 38837210 -50667343 - AluSq SINE Alu -10 303 1 213 65 0 0 chr17 38837213 38837244 -50667309 + (T)n Simple_repeat Simple_repeat 1 31 0 888 253 0 15 chr17 38838225 38838423 -50666130 - MIR SINE MIR -51 211 17 24 53 0 0 chr17 38838426 38838464 -50666089 + AT_rich Low_complexity Low_complexity 1 38 0 193 179 0 30 chr17 38838914 38838981 -50665572 + CT-rich Low_complexity Low_complexity 1 65 0 210 132 57 0 chr17 38841911 38841964 -50662589 + GA-rich Low_complexity Low_complexity 2 57 0 686 183 17 0 chr17 38843958 38844073 -50660480 - FLAM_A SINE Alu -14 128 12 389 261 46 8 chr17 38844079 38844209 -50660344 - MIR SINE MIR -48 214 80 394 287 28 0 chr17 38844775 38844883 -50659670 + L2 LINE L2 3189 3299 -14 215 59 0 29 chr17 38844883 38844917 -50659636 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 1723 162 3 48 chr17 38845386 38845479 -50659074 + AluJo SINE Alu 1 97 -215 2204 119 0 0 chr17 38845479 38845773 -50658780 + AluSx SINE Alu 1 294 -18 1723 162 3 48 chr17 38845773 38845988 -50658565 + AluJo SINE Alu 97 295 -17 2395 100 0 0 chr17 38845992 38846301 -50658252 + AluSc SINE Alu 1 309 0 2379 61 7 0 chr17 38846885 38847180 -50657373 - AluY SINE Alu -14 297 1 1181 30 0 7 chr17 38847180 38847315 -50657238 - AluSc SINE Alu -175 134 1 204 241 56 0 chr17 38847381 38847435 -50657118 + MIR SINE MIR 132 188 -74 2303 199 118 20 chr17 38848533 38849040 -50655513 + MER119 DNA MER1_type 27 583 0 440 284 115 29 chr17 38849040 38849245 -50655308 + L1ME4a LINE L1 4440 4626 -1520 1432 231 3 3 chr17 38849245 38849539 -50655014 + AluJo SINE Alu 1 294 -18 440 284 115 29 chr17 38849539 38849682 -50654871 + L1ME4a LINE L1 4626 4818 -1328 2239 109 0 3 chr17 38849716 38850018 -50654535 - AluSx SINE Alu -11 301 1 422 291 147 65 chr17 38850060 38850535 -50654018 + L1ME4a LINE L1 5384 5897 -224 231 233 135 43 chr17 38850542 38850705 -50653848 + L1ME4a LINE L1 5923 6100 -21 231 304 18 0 chr17 38850730 38850786 -50653767 - MIR SINE MIR -167 95 39 2562 68 0 0 chr17 38851264 38851574 -50652979 - AluY SINE Alu -1 310 1 2122 252 72 60 chr17 38852140 38852741 -50651812 - L2 LINE L2 -6 3307 2682 2083 128 3 22 chr17 38852741 38853053 -50651500 - AluSx SINE Alu -6 306 1 2122 252 72 60 chr17 38853053 38853512 -50651041 - L2 LINE L2 -631 2682 2230 1075 208 127 9 chr17 38853630 38853842 -50650711 - MER8 DNA MER2_type -1 238 2 2098 93 11 0 chr17 38854430 38854710 -50649843 - AluSc SINE Alu -26 283 1 207 0 0 0 chr17 38854711 38854734 -50649819 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1705 171 0 11 chr17 38854734 38855021 -50649532 - AluJo SINE Alu -28 284 1 21 0 0 0 chr17 38855733 38855754 -50648799 + AT_rich Low_complexity Low_complexity 1 21 0 1862 159 0 7 chr17 38855754 38856044 -50648509 - AluJb SINE Alu -24 288 1 280 125 0 0 chr17 38856174 38856222 -50648331 - MADE1 DNA Mariner 0 80 33 264 30 0 0 chr17 38856237 38856270 -50648283 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1742 180 0 7 chr17 38856272 38856556 -50647997 - AluJb SINE Alu -30 282 1 3292 268 60 49 chr17 38857661 38858338 -50646215 + L1ME3A LINE L1 3712 4380 -1782 1769 181 3 7 chr17 38858338 38858625 -50645928 + AluJo SINE Alu 1 286 -26 3292 268 60 49 chr17 38858625 38859427 -50645126 + L1ME3A LINE L1 4380 5172 -990 1720 152 4 4 chr17 38859427 38859697 -50644856 + AluJo SINE Alu 21 290 -22 3292 268 60 49 chr17 38859697 38860504 -50644049 + L1ME3A LINE L1 5172 6050 -112 2069 142 0 19 chr17 38860607 38860925 -50643628 - AluSx SINE Alu 0 312 1 219 226 38 19 chr17 38861887 38861940 -50642613 - L3 LINE CR1 -1 1576 1523 596 227 0 111 chr17 38862052 38862224 -50642329 - MIR3 SINE MIR -55 153 1 308 75 0 38 chr17 38864550 38864603 -50639950 + (GGA)n Simple_repeat Simple_repeat 1 51 0 215 139 28 0 chr17 38864946 38864982 -50639571 + CT-rich Low_complexity Low_complexity 1 37 0 794 163 0 57 chr17 38866235 38866376 -50638177 - FLAM_C SINE Alu 0 133 1 2306 88 3 0 chr17 38867033 38867362 -50637191 - AluSp SINE Alu 0 330 1 2079 95 33 0 chr17 38867369 38867677 -50636876 - AluSp SINE Alu 0 317 1 198 0 0 0 chr17 38868403 38868425 -50636128 + (A)n Simple_repeat Simple_repeat 1 22 0 2542 31 27 0 chr17 38868753 38869046 -50635507 - AluY SINE Alu -10 301 1 900 143 0 0 chr17 38869070 38869203 -50635350 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr17 38869663 38869684 -50634869 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr17 38871642 38871666 -50632887 + (TA)n Simple_repeat Simple_repeat 1 24 0 2202 115 0 0 chr17 38872424 38872711 -50631842 - AluSx SINE Alu -23 289 3 587 159 44 9 chr17 38872803 38872916 -50631637 - MIR SINE MIR -41 221 105 526 252 189 9 chr17 38873583 38873766 -50630787 - MIR SINE MIR -44 218 3 33 0 0 0 chr17 38874141 38874174 -50630379 + AT_rich Low_complexity Low_complexity 1 33 0 186 133 0 0 chr17 38876640 38876670 -50627883 + (TTA)n Simple_repeat Simple_repeat 2 31 0 206 141 76 22 chr17 38876892 38876984 -50627569 + (TA)n Simple_repeat Simple_repeat 2 98 0 1448 219 131 88 chr17 38877032 38877736 -50626817 - MER21B LTR ERV1 -124 739 6 231 345 86 29 chr17 38877977 38878116 -50626437 - MER5B DNA MER1_type -30 148 2 1319 183 76 3 chr17 38878126 38878427 -50626126 - MER33 DNA MER1_type 0 324 2 537 198 148 0 chr17 38878736 38878837 -50625716 - FLAM_A SINE Alu -16 117 2 2395 77 0 0 chr17 38878874 38879174 -50625379 - AluY SINE Alu 0 311 12 2133 113 10 0 chr17 38879353 38879654 -50624899 - AluSp SINE Alu -6 307 4 234 62 0 0 chr17 38879775 38879807 -50624746 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 225 0 0 0 chr17 38881751 38881776 -50622777 + (T)n Simple_repeat Simple_repeat 1 25 0 207 180 40 20 chr17 38887872 38887922 -50616631 + L2 LINE L2 3020 3070 -243 314 323 44 38 chr17 38888014 38888172 -50616381 - MIR SINE MIR -71 191 33 189 385 0 13 chr17 38888208 38888286 -50616267 - L2 LINE L2 -88 3184 3108 2317 81 3 0 chr17 38888665 38888979 -50615574 - AluSp SINE Alu 0 315 1 2256 84 7 7 chr17 38889181 38889479 -50615074 + AluSg SINE Alu 1 298 -12 231 313 0 61 chr17 38889535 38889634 -50614919 - MIR SINE MIR -58 150 58 228 67 0 0 chr17 38889713 38889743 -50614810 + (TA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr17 38890423 38890445 -50614108 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 38890489 38890510 -50614043 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 38890585 38890613 -50613940 + AT_rich Low_complexity Low_complexity 1 28 0 1838 151 31 7 chr17 38890964 38891255 -50613298 - AluSx SINE Alu -14 298 1 644 125 0 45 chr17 38892417 38892529 -50612024 + FLAM_C SINE Alu 23 129 -14 2362 106 0 0 chr17 38893210 38893522 -50611031 - AluSx SINE Alu 0 312 1 221 306 229 6 chr17 38897960 38898117 -50606436 + MIR SINE MIR 21 212 -50 21 36 0 0 chr17 38899830 38899858 -50604695 + AT_rich Low_complexity Low_complexity 1 28 0 2179 121 7 3 chr17 38902026 38902333 -50602220 - AluSx SINE Alu -4 308 1 900 128 0 15 chr17 38902453 38902586 -50601967 - FLAM_C SINE Alu 0 133 3 1586 69 178 32 chr17 38906191 38906438 -50598115 - AluY SINE Alu -18 283 1 1041 186 40 29 chr17 38906470 38906729 -50597824 - L1MC/D LINE L1 -409 5757 5504 32 43 0 0 chr17 38907617 38907663 -50596890 + AT_rich Low_complexity Low_complexity 1 46 0 2558 64 0 3 chr17 38908057 38908368 -50596185 - AluY SINE Alu -1 310 1 24 67 0 0 chr17 38909765 38909810 -50594743 + AT_rich Low_complexity Low_complexity 1 45 0 331 110 14 55 chr17 38910852 38910925 -50593628 + L1MC5 LINE L1 7634 7703 -258 526 200 166 11 chr17 38910978 38911153 -50593400 + L1MC5 LINE L1 7709 7910 -51 1697 176 30 3 chr17 38911158 38911459 -50593094 - AluJb SINE Alu -3 309 1 261 0 0 0 chr17 38912683 38912712 -50591841 + (CA)n Simple_repeat Simple_repeat 1 29 0 2506 74 0 0 chr17 38915151 38915460 -50589093 + AluSc SINE Alu 1 309 0 1797 131 0 67 chr17 38915821 38915972 -50588581 + AluSx SINE Alu 1 122 -190 387 0 0 0 chr17 38915972 38916015 -50588538 + (TA)n Simple_repeat Simple_repeat 1 43 0 1797 131 0 67 chr17 38916015 38916177 -50588376 + AluSx SINE Alu 122 293 -19 27 29 0 0 chr17 38916367 38916401 -50588152 + AT_rich Low_complexity Low_complexity 1 34 0 195 281 158 0 chr17 38918657 38918739 -50585814 + MIR3 SINE MIR 110 204 -4 180 209 119 45 chr17 38918997 38919064 -50585489 + L2 LINE L2 1637 1708 -1606 21 0 0 0 chr17 38921578 38921599 -50582954 + AT_rich Low_complexity Low_complexity 1 21 0 613 247 74 0 chr17 38921761 38921923 -50582630 - MIR SINE MIR -16 246 73 849 182 10 48 chr17 38922120 38922329 -50582224 - L1MD3 LINE L1 -24 7971 7771 2061 106 4 0 chr17 38922381 38922646 -50581907 + AluSx SINE Alu 1 266 -46 558 149 0 0 chr17 38922646 38922733 -50581820 + AluSg/x SINE Alu 219 305 -7 1906 94 0 65 chr17 38922771 38923047 -50581506 + AluSg SINE Alu 33 290 -20 242 175 0 0 chr17 38923074 38923114 -50581439 + MIR SINE MIR 93 132 -130 577 273 150 5 chr17 38923141 38923361 -50581192 - MIR SINE MIR 0 262 11 217 184 41 0 chr17 38923377 38923426 -50581127 + MIR SINE MIR 211 261 -1 1997 129 3 35 chr17 38923561 38923879 -50580674 + AluJb SINE Alu 1 308 -4 2078 139 0 7 chr17 38924023 38924325 -50580228 + AluJo SINE Alu 1 300 -12 428 300 0 50 chr17 38924541 38924681 -50579872 - MIR SINE MIR -108 154 22 222 243 40 0 chr17 38925351 38925425 -50579128 - L2 LINE L2 -1107 2207 2131 21 0 0 0 chr17 38925581 38925602 -50578951 + AT_rich Low_complexity Low_complexity 1 21 0 1824 178 0 7 chr17 38925604 38925907 -50578646 + AluJo SINE Alu 1 301 -11 1642 131 39 11 chr17 38925945 38926205 -50578348 - AluSx SINE Alu -21 291 25 576 158 53 9 chr17 38926216 38926330 -50578223 - L1MB7 LINE L1 -43 6141 6023 729 185 0 8 chr17 38926370 38926500 -50578053 - L1ME1 LINE L1 -5 6161 6033 4275 236 154 42 chr17 38926500 38928186 -50576367 - L2 LINE L2 -1182 2132 258 21 36 0 0 chr17 38928354 38928382 -50576171 + AT_rich Low_complexity Low_complexity 1 28 0 1031 114 126 0 chr17 38929114 38929289 -50575264 + MSTB LTR MaLR 1 197 -229 288 0 0 0 chr17 38929905 38929937 -50574616 + (A)n Simple_repeat Simple_repeat 1 32 0 1187 159 22 22 chr17 38929970 38930197 -50574356 + MSTB LTR MaLR 200 426 0 35 24 0 0 chr17 38931700 38931742 -50572811 + AT_rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr17 38931786 38931828 -50572725 + AT_rich Low_complexity Low_complexity 1 42 0 717 94 0 9 chr17 38931868 38931974 -50572579 - AluSp/q SINE Alu 0 313 209 2304 78 55 0 chr17 38932051 38932344 -50572209 - AluSc SINE Alu 0 309 1 706 141 50 0 chr17 38937784 38937905 -50566648 - AluJb SINE Alu -22 290 164 2139 114 10 3 chr17 38939358 38939655 -50564898 + AluSq SINE Alu 1 299 -14 2453 87 3 3 chr17 38939730 38940041 -50564512 + AluSx SINE Alu 1 311 -1 369 0 0 0 chr17 38940280 38940321 -50564232 + (TG)n Simple_repeat Simple_repeat 2 42 0 517 256 30 32 chr17 38941042 38941275 -50563278 - MIR SINE MIR 0 262 32 1018 184 41 0 chr17 38941469 38941665 -50562888 - L1MB4 LINE L1 0 6180 5977 21 36 0 0 chr17 38942516 38942544 -50562009 + AT_rich Low_complexity Low_complexity 1 28 0 1728 152 16 55 chr17 38943623 38943932 -50560621 + AluJb SINE Alu 1 297 -15 207 229 165 46 chr17 38944009 38944118 -50560435 + MIR SINE MIR 117 238 -24 1480 204 41 3 chr17 38945356 38945650 -50558903 - AluJo SINE Alu -7 305 1 1378 153 22 0 chr17 38945697 38945920 -50558633 - AluJo SINE Alu 0 312 85 307 247 35 0 chr17 38946068 38946153 -50558400 - L2 LINE L2 0 3313 3226 552 205 102 98 chr17 38947383 38947598 -50556955 + MIR SINE MIR 26 241 -21 321 26 0 0 chr17 38947822 38947860 -50556693 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 234 222 0 0 chr17 38949786 38949840 -50554713 + T-rich Low_complexity Low_complexity 1 54 0 211 297 99 22 chr17 38950457 38950548 -50554005 + MIR SINE MIR 95 192 -70 194 311 126 8 chr17 38950858 38950977 -50553576 - MIR3 SINE MIR -63 145 13 2387 81 3 0 chr17 38951224 38951519 -50553034 + AluSp SINE Alu 3 298 -15 2420 100 3 0 chr17 38954017 38954326 -50550227 - AluSp SINE Alu -2 311 2 1157 110 0 0 chr17 38954417 38954571 -50549982 - AluSg/x SINE Alu -14 296 143 1533 179 16 26 chr17 38954943 38955250 -50549303 - AluJb SINE Alu -8 304 1 591 235 221 5 chr17 38955366 38955570 -50548983 + MIR SINE MIR 15 262 0 1246 92 179 5 chr17 38955692 38955888 -50548665 - MER30 DNA MER1_type 0 230 1 1486 140 23 45 chr17 38955889 38956154 -50548399 - AluJo SINE Alu -52 260 2 303 49 0 0 chr17 38956158 38956199 -50548354 + (TG)n Simple_repeat Simple_repeat 2 42 0 412 200 0 0 chr17 38956199 38956269 -50548284 - FLAM SINE Alu -16 117 48 24 32 0 0 chr17 38956810 38956841 -50547712 + AT_rich Low_complexity Low_complexity 1 31 0 339 234 35 113 chr17 38957334 38957408 -50547145 + MIR SINE MIR 14 73 -189 2281 106 10 0 chr17 38957408 38957710 -50546843 + AluSx SINE Alu 1 305 -7 339 234 35 113 chr17 38957710 38957776 -50546777 + MIR SINE MIR 73 143 -119 888 218 63 0 chr17 38958325 38958531 -50546022 + MIR SINE MIR 11 229 -33 4017 205 67 58 chr17 38958607 38958804 -50545749 - L1MC4 LINE L1 -5 8037 7843 2000 141 41 0 chr17 38958804 38959095 -50545458 - AluSx SINE Alu -9 303 1 4017 205 67 58 chr17 38959095 38960130 -50544423 - L1MC4 LINE L1 -199 7843 6794 247 253 0 79 chr17 38960193 38960383 -50544170 + CT-rich Low_complexity Low_complexity 1 175 0 429 356 7 0 chr17 38963127 38963262 -50541291 - L2 LINE L2 0 3272 3137 471 283 110 32 chr17 38963466 38963774 -50540779 - L2 LINE L2 -340 2974 2643 362 177 94 0 chr17 38964064 38964160 -50540393 + Charlie7 DNA MER1_type 51 155 -2457 364 253 148 44 chr17 38965979 38966112 -50538441 + MIR SINE MIR 56 214 -48 1890 170 0 0 chr17 38966112 38966406 -50538147 + AluJo SINE Alu 1 294 -18 364 253 148 44 chr17 38966406 38966454 -50538099 + MIR SINE MIR 214 256 -6 1454 160 73 24 chr17 38967616 38967904 -50536649 - AluJb SINE Alu -10 302 1 1784 177 14 0 chr17 38968034 38968328 -50536225 + AluJo SINE Alu 1 298 -14 728 206 37 102 chr17 38971406 38971731 -50532822 - L1MC4 LINE L1 -2 8040 7737 850 231 124 7 chr17 38971733 38972006 -50532547 - L1MC4 LINE L1 -503 7539 7235 369 312 145 27 chr17 38972086 38972307 -50532246 - L1MC4 LINE L1 -935 7107 6861 1976 122 24 10 chr17 38975581 38975876 -50528677 + AluSc SINE Alu 1 299 -10 245 237 254 65 chr17 38977652 38977821 -50526732 + MIR SINE MIR 10 210 -52 263 216 0 0 chr17 38978129 38978180 -50526373 + MIR3 SINE MIR 135 185 -23 1977 107 48 0 chr17 38978726 38979017 -50525536 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr17 38979100 38979124 -50525429 + (A)n Simple_repeat Simple_repeat 1 24 0 1684 160 0 39 chr17 38979126 38979438 -50525115 + AluJb SINE Alu 1 300 -12 1905 126 8 62 chr17 38979447 38979640 -50524913 + L1MB3 LINE L1 5820 5987 -196 1726 144 0 69 chr17 38979640 38979946 -50524607 - AluJo SINE Alu -18 294 10 1905 126 8 62 chr17 38979946 38980108 -50524445 + L1MB3 LINE L1 5987 6156 -27 2009 250 76 24 chr17 38980134 38980988 -50523565 + L1ME1 LINE L1 1080 2132 -4431 1354 176 50 56 chr17 38981032 38981086 -50523467 + L1MB2 LINE L1 5254 5307 -864 2109 112 0 0 chr17 38981086 38981380 -50523173 - AluSx SINE Alu -18 294 1 1354 176 50 56 chr17 38981380 38981406 -50523147 + L1MB2 LINE L1 5307 5332 -839 1706 160 7 10 chr17 38981406 38981699 -50522854 + AluJb SINE Alu 1 292 -20 1354 176 50 56 chr17 38981699 38981974 -50522579 + L1MB2 LINE L1 5332 5608 -563 978 154 85 40 chr17 38981974 38982175 -50522378 + AluJb SINE Alu 1 210 -102 725 146 0 0 chr17 38982232 38982335 -50522218 + FRAM SINE Alu 41 143 -33 3272 126 33 28 chr17 38982335 38982692 -50521861 + L1MB2 LINE L1 5590 5953 -218 2081 116 17 0 chr17 38982692 38982994 -50521559 + AluSx SINE Alu 2 308 -4 3272 126 33 28 chr17 38982994 38983208 -50521345 + L1MB2 LINE L1 5953 6164 -7 21 0 0 0 chr17 38983223 38983244 -50521309 + AT_rich Low_complexity Low_complexity 1 21 0 1314 167 144 19 chr17 38983253 38983516 -50521037 + AluJo SINE Alu 1 296 -6 404 152 25 0 chr17 38983542 38983621 -50520932 + L1ME1 LINE L1 2364 2444 -3938 1748 147 0 43 chr17 38983625 38983951 -50520602 + AluJo SINE Alu 1 312 0 564 148 11 0 chr17 38983960 38984048 -50520505 - AluJo SINE Alu -119 193 105 833 239 31 41 chr17 38984056 38984349 -50520204 + L1ME1 LINE L1 2469 2758 -3624 4578 209 50 82 chr17 38984369 38984541 -50520012 + L1ME1 LINE L1 3295 3471 -2911 2314 94 0 0 chr17 38984541 38984850 -50519703 + AluSc SINE Alu 1 309 0 4578 209 50 82 chr17 38984850 38985116 -50519437 + L1ME1 LINE L1 3471 3744 -2638 2023 128 0 0 chr17 38985116 38985414 -50519139 + AluSx SINE Alu 1 298 -14 4578 209 50 82 chr17 38985414 38985490 -50519063 + L1ME1 LINE L1 3744 3821 -2561 2289 95 0 0 chr17 38985490 38985796 -50518757 + AluSg SINE Alu 1 306 -4 4578 209 50 82 chr17 38985796 38985968 -50518585 + L1ME1 LINE L1 3821 3997 -2385 942 214 12 0 chr17 38985968 38986136 -50518417 + FAM SINE Alu 1 170 -5 4578 209 50 82 chr17 38986136 38986170 -50518383 + L1ME1 LINE L1 3997 4031 -2351 1771 132 35 7 chr17 38986170 38986457 -50518096 - AluSx SINE Alu -12 300 6 4578 209 50 82 chr17 38986457 38986514 -50518039 + L1ME1 LINE L1 4031 4088 -2294 2424 78 12 27 chr17 38986514 38986849 -50517704 - L1PA8A LINE L1 -9 6122 5793 4578 209 50 82 chr17 38986849 38986871 -50517682 + L1ME1 LINE L1 4088 4109 -2273 1496 140 39 60 chr17 38986871 38987004 -50517549 + AluJb SINE Alu 17 151 -161 1860 151 7 3 chr17 38987004 38987308 -50517245 + AluSx SINE Alu 1 305 -7 1496 140 39 60 chr17 38987308 38987459 -50517094 + AluJb SINE Alu 151 295 -17 4578 209 50 82 chr17 38987459 38987664 -50516889 + L1ME1 LINE L1 4109 4319 -2063 1937 110 13 20 chr17 38987664 38987965 -50516588 + AluSx SINE Alu 2 300 -12 4578 209 50 82 chr17 38987965 38988584 -50515969 + L1ME1 LINE L1 4319 4873 -1509 1607 154 0 4 chr17 38988586 38988846 -50515707 + AluJo SINE Alu 1 259 -53 3275 210 87 20 chr17 38989300 38989815 -50514738 + L1ME1 LINE L1 4875 5354 -1048 2181 87 30 0 chr17 38989815 38990115 -50514438 + AluSc SINE Alu 1 309 0 3275 210 87 20 chr17 38990115 38991028 -50513525 + L1ME1 LINE L1 5354 6399 -3 1975 124 7 0 chr17 38991048 38991331 -50513222 + AluSx SINE Alu 1 285 -27 433 178 93 56 chr17 38994503 38994610 -50509943 - MER3 DNA MER1_type -98 111 1 208 188 62 0 chr17 38995142 38995190 -50509363 + L2 LINE L2 3262 3312 -1 184 261 204 23 chr17 38995258 38995346 -50509207 - MIR3 SINE MIR -21 187 84 1726 130 3 60 chr17 38996228 38996544 -50508009 - AluJo SINE Alu -14 298 1 1735 117 23 0 chr17 38996568 38996833 -50507720 + AluSx SINE Alu 42 312 0 256 244 29 107 chr17 38997861 38998066 -50506487 + L1ME LINE L1 5585 5773 -348 1952 136 3 0 chr17 38998401 38998702 -50505851 + AluJb SINE Alu 1 302 -10 2071 126 0 7 chr17 38999859 39000160 -50504393 + AluSx SINE Alu 1 299 -13 848 136 0 58 chr17 39000649 39000804 -50503749 + AluJb SINE Alu 137 282 -30 328 74 0 56 chr17 39000848 39000902 -50503651 - MER66A LTR ERV1 -141 337 287 2032 116 27 0 chr17 39000968 39001269 -50503284 - AluSx SINE Alu -3 309 1 2138 160 52 40 chr17 39001289 39001514 -50503039 - L1MA7 LINE L1 -3 6288 6067 1684 120 0 19 chr17 39001514 39001772 -50502781 + AluSq SINE Alu 1 253 -60 291 71 0 0 chr17 39001776 39001818 -50502735 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 2138 160 52 40 chr17 39001818 39002067 -50502486 - L1MA7 LINE L1 -226 6065 5803 1416 203 35 140 chr17 39002077 39002241 -50502312 + L1M1 LINE L1 5268 5448 -857 2250 103 0 0 chr17 39002241 39002551 -50502002 + AluSg SINE Alu 1 310 0 1416 203 35 140 chr17 39002551 39002958 -50501595 + L1M1 LINE L1 5448 5779 -526 2696 215 77 67 chr17 39005917 39006075 -50498478 - Charlie2 DNA MER1_type -65 2797 2642 2222 62 4 0 chr17 39006075 39006351 -50498202 - AluSc SINE Alu -21 288 12 2696 215 77 67 chr17 39006351 39007131 -50497422 - Charlie2 DNA MER1_type -220 2642 1850 537 267 144 44 chr17 39007115 39007385 -50497168 - Charlie2 DNA MER1_type -2451 331 35 * 345 102 0 0 chr17 39008214 39008273 -50496280 + (TG)n Simple_repeat Simple_repeat 2 60 0 823 146 31 0 chr17 39008880 39009010 -50495543 + AluJo SINE Alu 1 134 -178 675 305 138 16 chr17 39009690 39010067 -50494486 - L3 LINE CR1 -156 1421 999 2400 47 0 10 chr17 39010329 39010630 -50493923 - AluY SINE Alu -13 298 1 391 265 31 0 chr17 39010776 39010874 -50493679 + MIR SINE MIR 51 151 -111 2253 106 0 0 chr17 39011280 39011592 -50492961 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 39012852 39012874 -50491679 + AT_rich Low_complexity Low_complexity 1 22 0 405 58 0 0 chr17 39013168 39013220 -50491333 + (TG)n Simple_repeat Simple_repeat 2 53 0 1159 196 26 18 chr17 39015074 39015303 -50489250 + MER46A DNA MER2_type 6 236 0 2417 81 0 0 chr17 39016911 39017221 -50487332 + AluY SINE Alu 2 311 0 1847 142 0 35 chr17 39017230 39017548 -50487005 + AluJo SINE Alu 1 307 -5 322 258 131 79 chr17 39017626 39018054 -50486499 + L1ME4a LINE L1 5003 5461 -769 2193 106 3 0 chr17 39018146 39018449 -50486104 + AluSx SINE Alu 1 304 -8 315 218 248 10 chr17 39018510 39018813 -50485740 + L1ME4a LINE L1 5572 5946 -175 312 187 0 13 chr17 39018877 39018952 -50485601 + L1ME4a LINE L1 6048 6121 0 661 295 58 10 chr17 39019347 39019554 -50484999 + MIR SINE MIR 34 250 -12 22 0 0 0 chr17 39019843 39019865 -50484688 + AT_rich Low_complexity Low_complexity 1 22 0 2695 126 12 12 chr17 39021816 39022244 -50482309 - MSTA LTR MaLR 0 428 1 387 189 0 0 chr17 39022264 39022354 -50482199 - L1MA4A LINE L1 -2 6301 6212 2150 100 0 29 chr17 39022637 39022947 -50481606 + AluSc SINE Alu 1 301 -8 996 190 0 6 chr17 39023856 39024030 -50480523 + FRAM SINE Alu 1 166 -10 531 122 0 0 chr17 39024205 39024279 -50480274 + AluS SINE Alu 1 74 -238 899 107 8 0 chr17 39024289 39024410 -50480143 + AluSg/x SINE Alu 176 297 -15 237 344 41 0 chr17 39024423 39024545 -50480008 - L1MC/D LINE L1 -2226 5582 5456 1179 117 0 0 chr17 39024574 39024737 -50479816 + AluSg/x SINE Alu 140 302 -8 2534 62 3 0 chr17 39024803 39025108 -50479445 - AluY SINE Alu -5 306 1 501 228 114 64 chr17 39025960 39026179 -50478374 + MLT1L LTR MaLR 165 394 -221 258 260 149 0 chr17 39027031 39027185 -50477368 + L1ME LINE L1 5684 5860 -261 1904 177 87 18 chr17 39027307 39027754 -50476799 + L1MC4 LINE L1 6671 7148 -894 1975 141 26 18 chr17 39028509 39028850 -50475703 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr17 39029617 39029641 -50474912 + AT_rich Low_complexity Low_complexity 1 24 0 804 168 0 0 chr17 39029741 39029860 -50474693 + FLAM_C SINE Alu 1 119 -24 1367 127 8 99 chr17 39029951 39030085 -50474468 + AluJo SINE Alu 1 146 -166 2138 123 7 3 chr17 39030085 39030393 -50474160 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 39030393 39030404 -50474149 + AluJo SINE Alu 146 156 -156 2259 112 0 13 chr17 39030404 39030717 -50473836 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 39030717 39030823 -50473730 + AluJo SINE Alu 156 230 -82 322 140 0 18 chr17 39030828 39030885 -50473668 - AluJ/FRAM SINE Alu -27 275 220 1767 178 7 0 chr17 39031145 39031448 -50473105 - AluJb SINE Alu -7 305 1 1785 149 3 70 chr17 39031507 39031822 -50472731 - AluJb SINE Alu -18 294 1 231 310 81 0 chr17 39031829 39031916 -50472637 - L1MC/D LINE L1 -2165 5643 5550 22 56 0 0 chr17 39031924 39031960 -50472593 + AT_rich Low_complexity Low_complexity 1 36 0 1207 192 48 16 chr17 39032113 39032426 -50472127 + MER33 DNA MER1_type 2 324 0 328 271 71 0 chr17 39033193 39033278 -50471275 + MIR SINE MIR 13 103 -159 * 898 249 28 23 chr17 39033251 39033468 -50471085 - MIR SINE MIR -25 237 20 2042 187 56 6 chr17 39033691 39034188 -50470365 - L1MC4a LINE L1 -228 7580 7059 2205 119 0 0 chr17 39034982 39035275 -50469278 - AluSx SINE Alu -19 293 1 245 288 34 0 chr17 39035487 39035546 -50469007 + MIR SINE MIR 13 73 -189 1594 161 37 68 chr17 39035808 39036162 -50468391 - MER2 DNA MER2_type -1 343 1 503 314 147 5 chr17 39036686 39036890 -50467663 - MIR SINE MIR -10 252 20 1006 219 32 16 chr17 39037154 39037401 -50467152 - MIR SINE MIR 0 262 12 372 341 46 17 chr17 39037552 39037725 -50466828 + L3b LINE CR1 1359 1536 -47 333 0 0 0 chr17 39037829 39037866 -50466687 + (CA)n Simple_repeat Simple_repeat 1 37 0 33 60 0 24 chr17 39038127 39038155 -50466398 + AT_rich Low_complexity Low_complexity 1 28 -53 1547 6 0 0 chr17 39038155 39038324 -50466229 - AluY SINE Alu -10 301 133 2218 126 0 0 chr17 39038324 39038633 -50465920 - AluSx SINE Alu -3 309 1 33 60 0 24 chr17 39038633 39038686 -50465867 + AT_rich Low_complexity Low_complexity 26 81 0 521 177 50 96 chr17 39039578 39039798 -50464755 - L1MC5 LINE L1 -212 7749 7540 21 36 0 0 chr17 39040172 39040200 -50464353 + AT_rich Low_complexity Low_complexity 1 28 0 287 239 128 0 chr17 39043684 39043793 -50460760 + HAL1 LINE L1 7 129 -2378 282 299 112 72 chr17 39043985 39044263 -50460290 + HAL1 LINE L1 387 675 -1832 1213 193 13 81 chr17 39044304 39044687 -50459866 + MLT1A1 LTR MaLR 1 357 -8 774 223 156 80 chr17 39044782 39045431 -50459122 + HAL1 LINE L1 765 1484 -1023 421 220 127 17 chr17 39045431 39045549 -50459004 - MER94 DNA DNA -3 131 1 774 223 156 80 chr17 39045549 39045676 -50458877 + HAL1 LINE L1 1484 1600 -907 471 127 28 0 chr17 39045676 39045786 -50458767 - AluSg/x SINE Alu 0 318 207 455 247 151 27 chr17 39045812 39046237 -50458316 + HAL1 LINE L1 1618 2118 -389 2001 165 80 8 chr17 39046237 39046638 -50457915 + MSTB1 LTR MaLR 3 432 0 455 247 151 27 chr17 39046638 39046681 -50457872 + HAL1 LINE L1 2118 2154 -353 2459 132 68 15 chr17 39046686 39047261 -50457292 - L1M4 LINE L1 -705 5469 4856 2001 110 24 10 chr17 39047627 39047919 -50456634 + AluSx SINE Alu 1 296 -16 257 307 83 51 chr17 39048078 39048332 -50456221 + L2 LINE L2 1807 2068 -1246 293 212 222 48 chr17 39048386 39048575 -50455978 + L2 LINE L2 2380 2601 -713 2214 96 0 13 chr17 39048590 39048891 -50455662 - AluSx SINE Alu -15 297 1 185 319 97 65 chr17 39049071 39049454 -50455099 + L2 LINE L2 2815 3209 -63 931 46 0 0 chr17 39049515 39049623 -50454930 - AluY SINE Alu -23 288 181 2144 100 0 0 chr17 39050214 39050494 -50454059 + AluSg SINE Alu 1 280 -30 384 145 0 0 chr17 39051068 39051130 -50453423 - Alu SINE Alu -5 297 236 225 0 0 0 chr17 39051249 39051274 -50453279 + (A)n Simple_repeat Simple_repeat 1 25 0 475 115 23 46 chr17 39051274 39051361 -50453192 + L2 LINE L2 1881 1965 -1349 5214 184 28 40 chr17 39051361 39052063 -50452490 - L1M4 LINE L1 -1078 5068 4359 2219 74 13 33 chr17 39052063 39052362 -50452191 - AluY SINE Alu -18 293 1 5214 184 28 40 chr17 39052362 39052526 -50452027 - L1M4 LINE L1 -1787 4359 4195 2193 106 3 3 chr17 39052526 39052828 -50451725 - AluSx SINE Alu -10 302 1 5214 184 28 40 chr17 39052828 39053273 -50451280 - L1M4 LINE L1 -1951 4195 3772 226 152 22 22 chr17 39053274 39053320 -50451233 + CT-rich Low_complexity Low_complexity 3 48 0 293 115 0 0 chr17 39053422 39053474 -50451079 + AluSc SINE Alu 248 299 0 810 254 33 39 chr17 39053491 39053749 -50450804 + L1M4 LINE L1 3243 3500 -2646 2133 130 0 0 chr17 39053749 39054048 -50450505 + AluSx SINE Alu 1 299 -13 810 254 33 39 chr17 39054048 39054124 -50450429 + L1M4 LINE L1 3500 3575 -2571 2247 112 0 3 chr17 39054124 39054436 -50450117 + AluY SINE Alu 1 311 0 1958 145 0 35 chr17 39054445 39054763 -50449790 + AluJo SINE Alu 1 307 -5 2292 106 3 0 chr17 39055361 39055664 -50448889 + AluSx SINE Alu 1 304 -8 305 272 112 12 chr17 39055725 39055894 -50448659 + L1ME LINE L1 5572 5757 -364 1665 171 4 11 chr17 39056053 39056317 -50448236 + AluJb SINE Alu 7 268 -44 21 71 0 0 chr17 39056317 39056359 -50448194 + AT_rich Low_complexity Low_complexity 1 42 0 5588 116 14 1 chr17 39057204 39058130 -50446423 + L1PB1 LINE L1 5215 6150 -1 372 331 50 22 chr17 39058152 39058333 -50446220 - MIR3 SINE MIR -5 203 18 805 183 0 0 chr17 39058505 39058636 -50445917 + FLAM_C SINE Alu 3 133 0 3140 219 49 94 chr17 39059185 39059248 -50445305 - L2 LINE L2 -1 3312 3248 933 176 49 29 chr17 39059248 39059453 -50445100 - MER3 DNA MER1_type 0 209 1 3140 219 49 94 chr17 39059453 39060751 -50443802 - L2 LINE L2 -65 3248 1996 620 163 10 0 chr17 39060751 39060849 -50443704 + FRAM SINE Alu 48 146 -30 1723 174 0 4 chr17 39060934 39061210 -50443343 + AluJo SINE Alu 1 275 -37 309 109 47 0 chr17 39061216 39061280 -50443273 + GA-rich Low_complexity Low_complexity 2 68 0 1853 65 0 73 chr17 39061385 39061660 -50442893 + AluSq SINE Alu 59 313 0 1331 192 63 4 chr17 39061919 39062190 -50442363 - AluJo SINE Alu -25 287 1 620 241 126 11 chr17 39062361 39062552 -50442001 + MIR SINE MIR 36 248 -14 264 342 90 67 chr17 39062862 39063263 -50441290 + L2 LINE L2 2848 3257 -15 1469 205 0 53 chr17 39063268 39063570 -50440983 + AluJo SINE Alu 1 286 -26 2189 112 3 0 chr17 39064290 39064584 -50439969 - AluSp SINE Alu -18 295 1 1917 160 0 29 chr17 39064618 39064925 -50439628 - AluJo SINE Alu -13 299 2 674 270 9 26 chr17 39065291 39065521 -50439032 + L2 LINE L2 874 1099 -2215 1123 181 75 31 chr17 39065532 39065825 -50438728 - MER46C DNA MER2_type -25 313 8 1394 226 239 20 chr17 39065825 39066435 -50438118 + L2 LINE L2 1090 1833 -1481 2240 75 14 4 chr17 39066436 39066714 -50437839 - AluSq SINE Alu -22 291 11 1391 159 0 9 chr17 39066724 39066951 -50437602 - AluSx SINE Alu -87 225 1 2087 156 0 0 chr17 39067268 39067576 -50436977 + AluJo SINE Alu 1 308 -4 273 330 57 0 chr17 39068914 39069020 -50435533 + MIR SINE MIR 20 131 -77 204 231 0 0 chr17 39069087 39069139 -50435414 + (CATA)n Simple_repeat Simple_repeat 4 55 0 207 300 0 29 chr17 39069820 39069890 -50434663 + GA-rich Low_complexity Low_complexity 1 68 0 2541 61 0 0 chr17 39071251 39071548 -50433005 + AluY SINE Alu 1 297 -14 484 219 107 11 chr17 39072460 39072638 -50431915 + L1ME4a LINE L1 5260 5454 -2354 461 264 173 31 chr17 39072647 39072999 -50431554 + L1ME4a LINE L1 5548 5949 -172 2073 116 10 14 chr17 39074812 39075105 -50429448 - AluSx SINE Alu -20 292 1 1807 172 0 10 chr17 39075845 39076141 -50428412 + AluJo SINE Alu 1 293 -19 461 252 8 8 chr17 39076677 39076800 -50427753 + MIR SINE MIR 138 260 -2 2186 110 0 23 chr17 39077289 39077597 -50426956 + AluSg SINE Alu 1 301 -9 1298 135 0 81 chr17 39077607 39077866 -50426687 + AluJo SINE Alu 54 291 -21 1444 196 7 37 chr17 39077894 39077936 -50426617 + AluJo SINE Alu 1 43 -269 2331 107 0 0 chr17 39077936 39078236 -50426317 + AluSx SINE Alu 1 300 -12 1444 196 7 37 chr17 39078236 39078489 -50426064 + AluJo SINE Alu 43 287 -25 2260 109 0 10 chr17 39079489 39079791 -50424762 + AluSx SINE Alu 3 301 -11 1757 182 0 25 chr17 39079795 39080114 -50424439 + AluJo SINE Alu 1 311 -1 1867 134 43 0 chr17 39080151 39080456 -50424097 + L1MB3 LINE L1 5866 6183 0 2085 136 3 0 chr17 39080486 39080795 -50423758 + AluY SINE Alu 1 310 -1 195 146 0 0 chr17 39080888 39080929 -50423624 + (A)n Simple_repeat Simple_repeat 1 41 0 2339 106 33 3 chr17 39080930 39081297 -50423256 + L1MB2 LINE L1 5792 6169 -2 737 176 8 0 chr17 39081312 39081524 -50423029 + FLAM_C SINE Alu 12 224 0 1165 150 0 0 chr17 39081524 39081697 -50422856 + AluJo/FRAM SINE Alu 131 303 -9 633 171 25 25 chr17 39082390 39082547 -50422006 + L1MC5 LINE L1 7772 7986 -9 2250 121 0 13 chr17 39082660 39082974 -50421579 + AluSg SINE Alu 1 310 0 475 214 258 11 chr17 39083782 39083964 -50420589 - MIR SINE MIR -2 260 34 1950 167 3 6 chr17 39084118 39084430 -50420123 - AluSq SINE Alu -2 311 1 2419 91 0 0 chr17 39084436 39084734 -50419819 - AluSq SINE Alu -15 298 1 1925 146 0 7 chr17 39085070 39085358 -50419195 + AluJo SINE Alu 11 296 -16 22 56 0 0 chr17 39085410 39085446 -50419107 + AT_rich Low_complexity Low_complexity 1 36 0 200 359 87 10 chr17 39085878 39085981 -50418572 + L3b LINE CR1 1473 1583 0 370 135 0 0 chr17 39086048 39086100 -50418453 + Alu SINE Alu 2 53 -255 185 185 15 0 chr17 39086107 39086172 -50418381 + (TA)n Simple_repeat Simple_repeat 2 67 0 368 252 111 44 chr17 39086353 39086488 -50418065 + MIR3 SINE MIR 58 201 -7 1648 155 16 63 chr17 39086743 39087060 -50417493 + AluJo SINE Alu 1 302 -10 334 360 18 9 chr17 39088461 39088575 -50415978 + MIR SINE MIR 32 146 -62 213 288 0 0 chr17 39090017 39090076 -50414477 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 32 43 0 0 chr17 39091076 39091122 -50413431 + AT_rich Low_complexity Low_complexity 1 46 0 591 230 7 20 chr17 39092297 39092445 -50412108 - MIR SINE MIR -2 260 115 21 0 0 0 chr17 39092830 39092851 -50411702 + AT_rich Low_complexity Low_complexity 1 21 0 715 306 72 3 chr17 39092881 39093201 -50411352 + L1ME LINE L1 5482 5823 -298 283 268 123 14 chr17 39093292 39093430 -50411123 + L1MC4 LINE L1 7641 7902 -140 1416 264 68 60 chr17 39093917 39094613 -50409940 + L1ME4a LINE L1 5347 6051 -70 2272 114 7 0 chr17 39094613 39094921 -50409632 - AluSx SINE Alu -2 310 1 1416 264 68 60 chr17 39094921 39094992 -50409561 + L1ME4a LINE L1 6051 6120 -1 231 114 0 0 chr17 39095567 39095602 -50408951 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3318 202 60 37 chr17 39096792 39097880 -50406673 - L1ME1 LINE L1 -148 6018 4910 1520 180 47 13 chr17 39097880 39098180 -50406373 + AluJo SINE Alu 1 310 -2 3318 202 60 37 chr17 39098180 39098295 -50406258 - L1ME1 LINE L1 -1256 4910 4799 2737 192 102 14 chr17 39098398 39099053 -50405500 + L1ME1 LINE L1 5449 6161 -5 * 4625 242 151 37 chr17 39099046 39099783 -50404770 + HAL1 LINE L1 142 794 -1713 1808 174 7 26 chr17 39099783 39100093 -50404460 + AluJo SINE Alu 1 304 -8 198 0 0 0 chr17 39100100 39100122 -50404431 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 4625 242 151 37 chr17 39100122 39100135 -50404418 + HAL1 LINE L1 799 809 -1698 1749 181 26 3 chr17 39100135 39100439 -50404114 + AluJb SINE Alu 1 311 -1 4625 242 151 37 chr17 39100439 39101800 -50402753 + HAL1 LINE L1 809 2503 -4 880 94 0 17 chr17 39101810 39101927 -50402626 + AluJb SINE Alu 5 119 -193 278 239 67 112 chr17 39102075 39102146 -50402407 + HAL1 LINE L1 1033 1106 -1401 1901 159 0 10 chr17 39102146 39102441 -50402112 + AluJo SINE Alu 5 296 -16 278 239 67 112 chr17 39102441 39102787 -50401766 + HAL1 LINE L1 1106 1431 -1076 1219 165 4 30 chr17 39102787 39103017 -50401536 + AluJo SINE Alu 86 309 -3 504 204 61 66 chr17 39103019 39103133 -50401420 + HAL1 LINE L1 1425 1539 -968 2165 143 135 29 chr17 39103133 39103586 -50400967 + MLT1D LTR MaLR 3 503 -2 504 204 61 66 chr17 39103586 39103652 -50400901 + HAL1 LINE L1 1539 1604 -903 1005 157 13 0 chr17 39104068 39104227 -50400326 - AluSg/x SINE Alu -9 301 141 1008 197 49 131 chr17 39104232 39104583 -50399970 + L2 LINE L2 1520 1821 -1493 808 138 0 0 chr17 39104583 39104699 -50399854 - FLAM_C SINE Alu -17 116 1 1008 197 49 131 chr17 39104699 39104835 -50399718 + L2 LINE L2 1821 1967 -1347 2109 91 29 4 chr17 39105455 39105754 -50398799 - AluSq SINE Alu 0 306 1 303 102 51 51 chr17 39105953 39106012 -50398541 + MER66B LTR ERV1 287 345 -141 351 238 64 103 chr17 39106469 39106619 -50397934 + L1ME LINE L1 5457 5601 -520 2191 113 0 7 chr17 39106619 39106919 -50397634 + AluSq SINE Alu 1 298 -15 351 238 64 103 chr17 39106919 39106962 -50397591 + L1ME LINE L1 5601 5644 -477 1620 150 51 2 chr17 39106965 39107277 -50397276 + MER33 DNA MER1_type 1 323 -1 237 330 11 0 chr17 39107293 39107384 -50397169 + L1P4 LINE L1 5674 5765 -396 670 264 22 11 chr17 39107644 39107826 -50396727 + MIR SINE MIR 21 204 -58 21 0 0 0 chr17 39107871 39107892 -50396661 + AT_rich Low_complexity Low_complexity 1 21 0 218 167 0 0 chr17 39107943 39107979 -50396574 + MIR SINE MIR 217 252 -10 1626 74 5 0 chr17 39108623 39108826 -50395727 + AluSp SINE Alu 88 291 -22 262 286 113 100 chr17 39109235 39109564 -50394989 - L3 LINE CR1 -124 1453 1121 305 311 106 0 chr17 39111175 39111307 -50393246 - L2 LINE L2 -2 3270 3125 207 176 0 0 chr17 39115495 39115529 -50389024 + (TG)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr17 39116618 39116643 -50387910 + GC_rich Low_complexity Low_complexity 1 25 0 194 88 0 29 chr17 39119056 39119090 -50385463 + (TGGGGG)n Simple_repeat Simple_repeat 2 34 0 254 325 8 16 chr17 39119102 39119225 -50385328 + GA-rich Low_complexity Low_complexity 2 123 0 27 49 0 0 chr17 39122704 39122745 -50381808 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr17 39123203 39123224 -50381329 + GC_rich Low_complexity Low_complexity 1 21 0 236 164 36 18 chr17 39126660 39126715 -50377838 + G-rich Low_complexity Low_complexity 3 58 0 552 207 0 9 chr17 39129962 39130073 -50374480 + MIR3 SINE MIR 87 196 -12 21 57 0 0 chr17 39130817 39130852 -50373701 + AT_rich Low_complexity Low_complexity 1 35 0 360 133 0 0 chr17 39131385 39131445 -50373108 + (TG)n Simple_repeat Simple_repeat 2 61 0 873 140 0 22 chr17 39131948 39132084 -50372469 + FLAM_C SINE Alu 1 133 0 761 169 7 35 chr17 39132539 39132681 -50371872 + AluSg/x SINE Alu 173 310 0 294 275 83 50 chr17 39134213 39134333 -50370220 + MIR SINE MIR 18 141 -67 1597 170 90 3 chr17 39134344 39134632 -50369921 + AluSq SINE Alu 1 313 0 838 183 6 28 chr17 39134646 39134826 -50369727 + MER5B DNA MER1_type 3 178 0 574 284 13 5 chr17 39136820 39137037 -50367516 - MIR SINE MIR -7 255 37 1658 164 49 0 chr17 39137180 39137467 -50367086 - AluJo SINE Alu -9 303 3 241 305 3 0 chr17 39137590 39137664 -50366889 + MIR SINE MIR 58 134 -74 373 295 16 38 chr17 39138642 39138825 -50365728 + GA-rich Low_complexity Low_complexity 1 179 0 419 254 35 9 chr17 39139310 39139424 -50365129 - MIR3 SINE MIR -28 180 64 500 259 35 18 chr17 39139615 39139806 -50364747 - MIR SINE MIR -51 157 19 206 157 43 14 chr17 39140910 39140980 -50363573 + GA-rich Low_complexity Low_complexity 2 73 0 21 0 0 0 chr17 39141513 39141534 -50363019 + AT_rich Low_complexity Low_complexity 1 21 0 333 155 0 0 chr17 39142053 39142111 -50362442 + (TG)n Simple_repeat Simple_repeat 1 58 0 238 321 37 0 chr17 39142847 39142928 -50361625 - MIR3 SINE MIR -7 201 118 3961 54 2 0 chr17 39143278 39143763 -50360790 - L1PA7 LINE L1 -1 6153 5668 195 42 0 0 chr17 39143996 39144020 -50360533 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 757 71 0 0 chr17 39144050 39144149 -50360404 - L1PA5 LINE L1 0 6154 6056 506 232 66 33 chr17 39144227 39144378 -50360175 - MIR SINE MIR -75 187 32 343 293 20 10 chr17 39144416 39144515 -50360038 + L2 LINE L2 3192 3291 -22 2089 102 0 10 chr17 39144534 39144828 -50359725 + AluSx SINE Alu 1 291 -21 670 157 0 41 chr17 39144959 39145080 -50359473 - FLAM_C SINE Alu -16 127 12 2234 101 0 0 chr17 39145425 39145722 -50358831 - AluSx SINE Alu -15 297 1 295 215 0 15 chr17 39145734 39145799 -50358754 - L2 LINE L2 -20 3252 3189 252 0 0 0 chr17 39146830 39146858 -50357695 + (TG)n Simple_repeat Simple_repeat 2 29 0 208 250 28 42 chr17 39147211 39147283 -50357270 + MIR SINE MIR 35 105 -157 249 359 8 17 chr17 39147381 39147498 -50357055 + L2 LINE L2 3081 3196 -76 1820 171 10 0 chr17 39147532 39147841 -50356712 + AluJo SINE Alu 1 312 0 180 200 0 0 chr17 39147933 39147973 -50356580 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 324 0 0 0 chr17 39148010 39148046 -50356507 + (CA)n Simple_repeat Simple_repeat 2 37 0 849 206 57 5 chr17 39148655 39148864 -50355689 - MIR SINE MIR -20 242 23 1756 152 13 3 chr17 39150049 39150352 -50354201 - L1MB3 LINE L1 0 6183 5878 2148 101 0 3 chr17 39150363 39150661 -50353892 - AluSg SINE Alu -13 297 1 1486 113 0 52 chr17 39150909 39151157 -50353396 - AluJb SINE Alu -14 298 64 430 200 110 17 chr17 39151166 39151302 -50353251 - MER20B DNA MER1_type -43 176 29 267 211 18 0 chr17 39151328 39151385 -50353168 + L2 LINE L2 3213 3270 -2 258 297 33 124 chr17 39152169 39152442 -50352111 + L2 LINE L2 2916 3163 -109 213 319 0 66 chr17 39152526 39152617 -50351936 + L2 LINE L2 2995 3079 -193 317 274 171 8 chr17 39152928 39153045 -50351508 + MIR3 SINE MIR 11 146 -62 2276 89 3 0 chr17 39153145 39153449 -50351104 - AluSg SINE Alu -5 305 1 601 336 213 9 chr17 39153466 39153888 -50350665 - L3 LINE CR1 -2 1575 1068 2093 123 3 3 chr17 39153912 39154212 -50350341 - AluSx SINE Alu -12 300 1 2107 118 10 0 chr17 39154268 39154572 -50349981 - AluSx SINE Alu 0 312 6 1068 259 36 121 chr17 39154774 39154884 -50349669 + L1MC4a LINE L1 5254 5372 -796 1525 173 24 30 chr17 39154884 39155179 -50349374 - AluJb SINE Alu -19 293 1 1068 259 36 121 chr17 39155179 39155782 -50348771 + L1MC4a LINE L1 5372 5537 -631 198 0 0 0 chr17 39155929 39155951 -50348602 + (TA)n Simple_repeat Simple_repeat 2 23 0 2086 114 0 3 chr17 39155951 39156248 -50348305 - AluSq SINE Alu -17 296 1 2030 124 7 3 chr17 39156295 39156593 -50347960 - AluSx SINE Alu -13 299 1 782 120 0 0 chr17 39156696 39156804 -50347749 - AluJ SINE Alu -14 298 191 490 175 268 0 chr17 39156804 39156901 -50347652 - AluJ SINE Alu -186 126 4 213 241 0 0 chr17 39156923 39156977 -50347576 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 352 346 66 57 chr17 39157114 39157568 -50346985 + L2 LINE L2 2815 3272 0 291 303 140 11 chr17 39157883 39158061 -50346492 + MIR SINE MIR 43 243 -19 840 249 40 32 chr17 39158582 39158835 -50345718 + MIR SINE MIR 1 255 -7 439 97 43 11 chr17 39159810 39159903 -50344650 + C-rich Low_complexity Low_complexity 2 97 0 327 301 35 9 chr17 39160116 39160229 -50344324 + MER5A DNA MER1_type 44 159 -30 1970 110 36 29 chr17 39160229 39160596 -50343957 - AluSg SINE Alu 0 369 1 358 271 101 8 chr17 39160644 39160773 -50343780 + MIR SINE MIR 46 186 -76 354 231 110 0 chr17 39161379 39161470 -50343083 - MIR SINE MIR -111 151 51 2108 94 31 0 chr17 39161547 39161834 -50342719 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 39161834 39161855 -50342698 + AT_rich Low_complexity Low_complexity 1 21 0 251 182 121 0 chr17 39161906 39161972 -50342581 + MLT1K LTR MaLR 1 74 -514 242 91 0 0 chr17 39161993 39162026 -50342527 - U2 snRNA snRNA -155 33 1 580 259 100 6 chr17 39162313 39162483 -50342070 + MLT1K LTR MaLR 378 563 -25 298 292 31 46 chr17 39162640 39162770 -50341783 + MIR SINE MIR 20 147 -61 4161 136 77 8 chr17 39162770 39163431 -50341122 + MER39 LTR ERV1 1 707 0 348 183 0 0 chr17 39163639 39163732 -50340821 + (CCAA)n Simple_repeat Simple_repeat 2 94 0 234 310 50 30 chr17 39163804 39163904 -50340649 - L2 LINE L2 -229 3043 2942 221 305 29 67 chr17 39165234 39165339 -50339214 - MIR SINE MIR -72 190 90 2187 117 0 13 chr17 39165416 39165732 -50338821 + AluSx SINE Alu 1 312 0 366 220 110 0 chr17 39165848 39165939 -50338614 + MIR SINE MIR 51 151 -111 248 204 20 0 chr17 39166526 39166575 -50337978 + MIR SINE MIR 97 146 -62 228 384 139 19 chr17 39167499 39167757 -50336796 + L2 LINE L2 2966 3254 -18 222 91 0 0 chr17 39168792 39168825 -50335728 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 220 296 12 0 chr17 39169512 39169593 -50334960 + G-rich Low_complexity Low_complexity 1 82 0 25 0 0 0 chr17 39169917 39169942 -50334611 + AT_rich Low_complexity Low_complexity 1 25 0 300 275 117 8 chr17 39171056 39171176 -50333377 + MIR SINE MIR 16 148 -60 214 231 123 15 chr17 39172345 39172410 -50332143 + MIR SINE MIR 10 81 -181 1819 148 0 0 chr17 39172422 39172858 -50331695 - AluSx SINE Alu 0 470 35 325 239 112 37 chr17 39173697 39173831 -50330722 + MIR3 SINE MIR 22 165 -43 303 242 16 89 chr17 39174028 39174152 -50330401 + MIR SINE MIR 120 234 -28 265 255 69 39 chr17 39174127 39174229 -50330324 - MIR SINE MIR -81 181 77 * 311 293 104 52 chr17 39175103 39175155 -50329398 - L1MC4a LINE L1 -1635 6173 6125 2157 103 3 3 chr17 39175155 39175456 -50329097 + AluSx SINE Alu 1 301 -11 2179 109 0 0 chr17 39175458 39175760 -50328793 + AluSx SINE Alu 1 302 -10 311 293 104 52 chr17 39175760 39176011 -50328542 - L1MC4a LINE L1 -1683 6125 5851 369 269 47 40 chr17 39176094 39176243 -50328310 + MIR SINE MIR 28 177 -85 2237 98 3 0 chr17 39176273 39176570 -50327983 + AluSp SINE Alu 1 298 -15 1193 240 26 8 chr17 39177712 39178070 -50326483 - L1 LINE L1 -1734 4412 4060 533 261 0 8 chr17 39178073 39178203 -50326350 - MIR SINE MIR -114 148 20 793 291 5 5 chr17 39178584 39178783 -50325770 + MIR SINE MIR 11 209 -53 342 280 106 8 chr17 39178957 39179089 -50325464 + MIR SINE MIR 92 236 -26 217 290 237 23 chr17 39179161 39179292 -50325261 - MIR SINE MIR -91 171 13 268 234 0 13 chr17 39179825 39179902 -50324651 + (CA)n Simple_repeat Simple_repeat 2 77 0 330 269 11 29 chr17 39179974 39180149 -50324404 + (CA)n Simple_repeat Simple_repeat 2 173 0 299 303 0 43 chr17 39180390 39180578 -50323975 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 118 0 0 chr17 39180684 39180718 -50323835 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 257 268 14 0 chr17 39181072 39181143 -50323410 - MIR SINE MIR -110 152 81 455 276 66 29 chr17 39181719 39181899 -50322654 - MIR SINE MIR -70 192 9 407 233 209 12 chr17 39182032 39182195 -50322358 + MIR SINE MIR 20 214 -48 366 231 67 164 chr17 39182448 39182643 -50321910 + MER5B DNA MER1_type 1 176 -2 358 255 0 75 chr17 39182658 39182722 -50321831 + MER5A DNA MER1_type 12 79 -110 2398 84 0 0 chr17 39182722 39183031 -50321522 + AluY SINE Alu 1 309 -2 2026 99 50 0 chr17 39183035 39183318 -50321235 + AluSq SINE Alu 3 299 -14 358 255 0 75 chr17 39183318 39183354 -50321199 + MER5A DNA MER1_type 82 109 -80 212 242 30 91 chr17 39183948 39184037 -50320516 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 -78 1366 161 173 0 chr17 39184037 39184291 -50320262 - AluJo SINE Alu -4 298 1 212 242 30 91 chr17 39184291 39184366 -50320187 + (TCTCTG)n Simple_repeat Simple_repeat 78 156 0 257 50 0 25 chr17 39184381 39184421 -50320132 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 660 100 8 10 chr17 39184421 39184543 -50320010 - L1PA4 LINE L1 -24 6131 6024 243 262 262 8 chr17 39184767 39184889 -50319664 - MIR SINE MIR -79 183 31 2122 117 0 22 chr17 39185135 39185452 -50319101 - AluSx SINE Alu 0 312 3 447 361 80 24 chr17 39185598 39186084 -50318469 - L2 LINE L2 -20 3252 2739 1976 130 7 7 chr17 39186109 39186409 -50318144 + AluSx SINE Alu 1 300 -12 450 275 29 41 chr17 39186427 39186598 -50317955 - MLT1J2 LTR MaLR 0 450 282 1661 176 11 45 chr17 39186601 39186958 -50317595 - MLT1A2 LTR MaLR -1 373 29 509 323 24 0 chr17 39187061 39187228 -50317325 - MLT1J2 LTR MaLR -213 237 67 407 316 87 41 chr17 39187603 39187821 -50316732 + MIR SINE MIR 35 262 0 545 293 56 23 chr17 39187824 39188039 -50316514 + MIR SINE MIR 41 262 0 183 333 0 0 chr17 39188108 39188159 -50316394 + L2 LINE L2 3263 3313 0 564 269 98 43 chr17 39188254 39188488 -50316065 + MIR SINE MIR 2 248 -14 473 221 245 6 chr17 39188982 39189145 -50315408 - MIR SINE MIR -38 224 23 256 279 45 27 chr17 39190153 39190264 -50314289 + MIR SINE MIR 68 180 -82 411 296 25 70 chr17 39190866 39191065 -50313488 - MIR SINE MIR -71 191 2 2326 225 33 14 chr17 39191396 39191907 -50312646 - MLT1F LTR MaLR 0 542 22 373 264 70 12 chr17 39191948 39192122 -50312431 + L1ME3A LINE L1 5928 6122 -48 1981 132 20 0 chr17 39192202 39192498 -50312055 - AluSx SINE Alu -10 302 1 251 361 0 10 chr17 39192517 39192614 -50311939 - MIR SINE MIR -77 131 36 848 274 239 3 chr17 39193050 39193418 -50311135 - L2 LINE L2 -5 3308 2854 186 343 14 14 chr17 39193418 39193491 -50311062 + MIR SINE MIR 23 95 -167 1771 163 3 0 chr17 39193546 39193835 -50310718 - AluJb SINE Alu -22 290 1 1804 133 30 30 chr17 39193835 39194135 -50310418 - AluJb SINE Alu -12 300 1 376 222 12 12 chr17 39194217 39194298 -50310255 + L2 LINE L2 3186 3266 -47 398 199 189 60 chr17 39194411 39194612 -50309941 - L2 LINE L2 -213 3059 2833 592 160 8 8 chr17 39194744 39194869 -50309684 + GA-rich Low_complexity Low_complexity 1 125 0 420 139 178 30 chr17 39195826 39195927 -50308626 - FLAM_A SINE Alu -7 135 20 368 211 0 13 chr17 39195929 39196005 -50308548 + MIR SINE MIR 79 153 -55 245 275 306 16 chr17 39196335 39196528 -50308025 + MIR SINE MIR 13 261 -1 387 269 56 9 chr17 39197271 39197379 -50307174 - MIR SINE MIR -118 144 32 455 177 71 9 chr17 39197524 39197651 -50306902 - MIR SINE MIR -61 147 29 317 298 82 28 chr17 39198152 39198407 -50306146 + L2 LINE L2 2470 2738 -576 1952 154 0 6 chr17 39198419 39198731 -50305822 + AluSx SINE Alu 1 310 -2 401 274 63 89 chr17 39198744 39199127 -50305426 + L2 LINE L2 2825 3197 -75 227 145 16 65 chr17 39199725 39199787 -50304766 + C-rich Low_complexity Low_complexity 2 60 0 681 239 13 80 chr17 39200552 39200791 -50303762 - MIR SINE MIR -33 229 7 901 238 10 5 chr17 39201615 39201821 -50302732 - MIR SINE MIR -21 241 35 932 205 68 19 chr17 39201824 39202029 -50302524 - MIR SINE MIR -11 251 37 186 43 0 0 chr17 39202204 39202227 -50302326 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 240 382 26 49 chr17 39202695 39202999 -50301554 + L2 LINE L2 2564 2860 -454 351 197 0 15 chr17 39203023 39203089 -50301464 - MIR SINE MIR -1 261 197 1535 154 4 0 chr17 39203089 39203335 -50301218 - Tigger3(Golem) DNA MER2_type 0 3038 2792 2131 118 0 16 chr17 39203335 39203671 -50300882 + AluSc SINE Alu 1 309 0 186 189 0 0 chr17 39203671 39203708 -50300845 + GA-rich Low_complexity Low_complexity 1 37 0 273 281 79 12 chr17 39203739 39203903 -50300650 + L2 LINE L2 2862 3036 -236 240 204 20 0 chr17 39204797 39204866 -50299687 + C-rich Low_complexity Low_complexity 1 70 0 2458 167 42 56 chr17 39204888 39204933 -50299620 - L1MA9 LINE L1 -5 6307 6263 2153 110 10 0 chr17 39204933 39205232 -50299321 + AluSx SINE Alu 1 302 -10 2458 167 42 56 chr17 39205232 39205756 -50298797 - L1MA9 LINE L1 -49 6263 5746 208 286 0 0 chr17 39205801 39205857 -50298696 + L2 LINE L2 3217 3272 0 182 244 24 0 chr17 39206123 39206164 -50298389 - MIR SINE MIR -6 256 215 1177 35 35 11 chr17 39206329 39206503 -50298050 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6349 70 9 6 chr17 39206534 39207407 -50297146 - L1PA8A LINE L1 -2 6129 5254 309 326 136 0 chr17 39208042 39208174 -50296379 - MIR SINE MIR -82 180 31 366 298 18 9 chr17 39208466 39208580 -50295973 - MIR SINE MIR -76 132 18 1839 156 10 3 chr17 39208664 39208966 -50295587 - AluJo SINE Alu -8 304 1 1285 199 52 19 chr17 39209711 39210018 -50294535 + MER58B DNA MER1_type 1 317 -24 1071 107 13 0 chr17 39210019 39210169 -50294384 - AluSg/x SINE Alu -7 305 154 839 207 88 51 chr17 39210274 39210491 -50294062 + AluJo SINE Alu 85 309 -3 258 304 22 43 chr17 39210946 39211084 -50293469 - MER5B DNA MER1_type -35 143 9 2075 94 37 7 chr17 39211107 39211406 -50293147 + AluSx SINE Alu 1 308 -4 254 326 0 0 chr17 39213251 39213340 -50291213 + GA-rich Low_complexity Low_complexity 1 89 0 245 282 73 18 chr17 39214226 39214336 -50290217 + L2 LINE L2 2946 3061 -211 654 247 79 71 chr17 39214427 39214726 -50289827 - L2 LINE L2 -5 3308 3035 817 25 33 8 chr17 39214936 39215057 -50289496 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 865 174 14 0 chr17 39215058 39215202 -50289351 - FRAM SINE Alu -30 146 1 338 288 91 25 chr17 39215325 39215505 -50289048 - MIR SINE MIR 0 262 61 2066 100 0 30 chr17 39215505 39215806 -50288747 - AluSq SINE Alu -21 292 1 338 288 91 25 chr17 39215806 39215863 -50288690 - MIR SINE MIR -201 61 9 185 244 22 0 chr17 39217112 39217157 -50287396 + L2 LINE L2 3252 3297 -16 2342 94 0 0 chr17 39217279 39217586 -50286967 - AluSx SINE Alu -5 307 1 282 303 67 51 chr17 39217684 39217879 -50286674 - L2 LINE L2 -338 2976 2779 888 266 44 62 chr17 39218108 39218495 -50286058 - MLT1I LTR MaLR 0 409 30 613 121 0 0 chr17 39218597 39218680 -50285873 + FRAM SINE Alu 31 113 -63 2241 92 3 13 chr17 39218955 39219261 -50285292 + AluSx SINE Alu 1 303 -9 385 276 22 36 chr17 39219821 39219873 -50284680 + GA-rich Low_complexity Low_complexity 1 52 -1255 1863 127 3 54 chr17 39219873 39220001 -50284552 + AluJo SINE Alu 1 134 -168 1902 138 0 46 chr17 39220001 39220191 -50284362 - AluSx SINE Alu 0 312 115 267 103 0 0 chr17 39220191 39220230 -50284323 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2119 88 0 3 chr17 39220230 39220513 -50284040 - AluSg SINE Alu -28 282 1 1902 138 0 46 chr17 39220513 39220648 -50283905 - AluSx SINE Alu -195 117 1 1863 127 3 54 chr17 39220648 39220834 -50283719 + AluJo SINE Alu 134 299 -3 385 276 22 36 chr17 39220834 39221147 -50283406 + GA-rich Low_complexity Low_complexity 52 1307 0 405 283 29 51 chr17 39221915 39222092 -50282461 + MIR SINE MIR 32 207 -55 2332 75 3 39 chr17 39222226 39222532 -50282021 - AluSx SINE Alu -17 295 1 217 312 83 18 chr17 39222733 39222842 -50281711 + L2 LINE L2 3153 3268 -4 596 260 69 76 chr17 39223051 39223128 -50281425 + L2 LINE L2 2639 2715 -598 2083 139 0 3 chr17 39223128 39223429 -50281124 + AluSx SINE Alu 1 300 -12 596 260 69 76 chr17 39223429 39223774 -50280779 + L2 LINE L2 2715 3059 -254 841 317 42 8 chr17 39223825 39224178 -50280375 - L1MEd LINE L1 -5305 814 450 2359 109 0 6 chr17 39224191 39224503 -50280050 - AluSg SINE Alu 0 310 1 2190 104 7 0 chr17 39224530 39224860 -50279693 - AluSg SINE Alu 0 310 1 562 176 29 0 chr17 39224879 39224981 -50279572 - AluJo/FRAM SINE Alu -20 292 188 582 143 0 184 chr17 39224981 39225128 -50279425 + FLAM_C SINE Alu 2 121 -22 373 165 4 0 chr17 39225154 39225247 -50279306 - FLAM_A SINE Alu -68 64 2 562 235 12 37 chr17 39225264 39225426 -50279127 - L1MEd LINE L1 -5959 160 3 638 269 56 15 chr17 39225450 39225647 -50278906 + L2 LINE L2 3108 3312 -1 549 241 170 31 chr17 39225626 39225850 -50278703 + MIR SINE MIR 7 261 -1 * 473 197 103 54 chr17 39226216 39226330 -50278223 + MIR SINE MIR 50 180 -82 1965 164 3 3 chr17 39226330 39226634 -50277919 - AluSx SINE Alu -8 304 1 473 197 103 54 chr17 39226634 39226722 -50277831 + MIR SINE MIR 180 262 0 389 192 14 0 chr17 39226725 39226798 -50277755 + L2 LINE L2 3225 3298 -15 563 92 11 0 chr17 39226800 39226887 -50277666 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 204 224 20 0 chr17 39226990 39227039 -50277514 - MIR3 SINE MIR -2 206 157 441 314 19 19 chr17 39227177 39227336 -50277217 - MIR3 SINE MIR -46 162 4 1837 174 0 0 chr17 39227386 39227689 -50276864 - AluJo SINE Alu 0 303 1 30 0 0 0 chr17 39227689 39227719 -50276834 + AT_rich Low_complexity Low_complexity 1 30 0 1777 159 0 40 chr17 39227867 39228168 -50276385 - AluJo SINE Alu -23 289 1 402 261 154 23 chr17 39228237 39228367 -50276186 - L1MC4 LINE L1 0 8042 7896 333 319 45 37 chr17 39228422 39228646 -50275907 - L1ME3A LINE L1 -224 5946 5831 405 266 0 0 chr17 39228705 39228799 -50275754 - L1ME3A LINE L1 -462 5708 5615 807 244 157 38 chr17 39228801 39229234 -50275319 - MLT1G LTR MaLR -2 585 108 277 247 34 111 chr17 39229284 39229362 -50275191 - L1ME3A LINE L1 -507 5614 5532 2032 119 0 40 chr17 39229362 39229665 -50274888 - AluSx SINE Alu -21 291 1 277 247 34 111 chr17 39229665 39229796 -50274757 - L1ME3A LINE L1 -589 5532 5426 1939 168 7 0 chr17 39229828 39230132 -50274421 - AluJo SINE Alu -6 306 1 451 286 63 11 chr17 39230132 39230307 -50274246 - L1ME3A LINE L1 -720 5442 5259 190 257 90 56 chr17 39230782 39230926 -50273627 + L2 LINE L2 2916 3064 -208 818 196 37 0 chr17 39231182 39231345 -50273208 - MER3 DNA MER1_type -78 131 10 411 134 247 21 chr17 39231345 39231442 -50273111 + AluJb SINE Alu 2 120 -192 369 186 29 0 chr17 39231603 39231673 -50272880 + MIR SINE MIR 56 127 -81 227 196 0 36 chr17 39231753 39231809 -50272744 + G-rich Low_complexity Low_complexity 2 55 0 299 306 139 7 chr17 39232383 39232527 -50272026 + MIR SINE MIR 90 252 -10 714 72 0 0 chr17 39233775 39233872 -50270681 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 718 145 21 41 chr17 39233935 39234080 -50270473 - FLAM_C SINE Alu 0 143 2 250 250 0 0 chr17 39234099 39234167 -50270386 - MIR SINE MIR -131 131 64 416 306 0 0 chr17 39234503 39234611 -50269942 - MER5B DNA MER1_type -69 109 2 361 221 84 0 chr17 39235434 39235529 -50269024 - MER5A DNA MER1_type -83 106 4 395 266 18 25 chr17 39236026 39236168 -50268385 + MIR3 SINE MIR 45 185 -47 465 301 49 12 chr17 39236264 39236427 -50268126 + MIR SINE MIR 56 224 -38 336 48 0 0 chr17 39236427 39236469 -50268084 + (CA)n Simple_repeat Simple_repeat 1 42 0 289 312 152 0 chr17 39237137 39237275 -50267278 + MIR SINE MIR 64 222 -40 2039 142 20 0 chr17 39237280 39237582 -50266971 + AluSq SINE Alu 1 308 -5 300 320 31 23 chr17 39237958 39238086 -50266467 + L3b LINE CR1 1267 1395 -188 1569 188 0 11 chr17 39238846 39239118 -50265435 - AluJb SINE Alu -6 306 38 269 221 0 29 chr17 39239365 39239433 -50265120 + (CA)n Simple_repeat Simple_repeat 1 66 0 687 195 92 18 chr17 39241434 39241598 -50262955 + MER45A DNA AcHobo 1 176 -2 186 267 189 0 chr17 39241750 39241840 -50262713 + MIR3 SINE MIR 78 184 -24 752 204 6 0 chr17 39241903 39242079 -50262474 + (CA)n Simple_repeat Simple_repeat 1 177 0 208 106 0 43 chr17 39243105 39243152 -50261401 + (CA)n Simple_repeat Simple_repeat 1 45 0 252 274 141 15 chr17 39245278 39245413 -50259140 - MIR SINE MIR -80 182 31 438 258 172 19 chr17 39246560 39246879 -50257674 - L2 LINE L2 -225 3088 2712 472 227 42 0 chr17 39246893 39247012 -50257541 + MIR SINE MIR 83 206 -56 277 267 58 23 chr17 39247148 39247234 -50257319 - L2 LINE L2 -6 3307 3219 255 232 0 0 chr17 39247989 39248045 -50256508 - L2 LINE L2 -1 3271 3216 373 267 208 28 chr17 39248541 39248720 -50255833 - MIR SINE MIR -57 205 6 2188 119 30 0 chr17 39248725 39249028 -50255525 - AluSx SINE Alu 0 312 1 345 231 127 15 chr17 39250210 39250344 -50254209 + MIR SINE MIR 70 218 -44 235 88 15 88 chr17 39250611 39250679 -50253874 + (CGAGG)n Simple_repeat Simple_repeat 4 66 0 392 275 90 25 chr17 39251070 39251270 -50253283 - MIR SINE MIR -12 250 38 662 267 17 61 chr17 39251937 39252136 -50252417 + L1M4 LINE L1 2685 2863 -3283 2187 87 7 0 chr17 39252136 39252442 -50252111 + AluSc SINE Alu 1 308 0 662 267 17 61 chr17 39252442 39252600 -50251953 + L1M4 LINE L1 2863 3027 -3119 1238 149 5 23 chr17 39252695 39252909 -50251644 + MER2 DNA MER2_type 1 210 -135 330 103 29 73 chr17 39252921 39252989 -50251564 - Alu SINE Alu 0 301 237 270 0 0 0 chr17 39253441 39253471 -50251082 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 569 241 14 24 chr17 39253821 39253991 -50250562 + MIR SINE MIR 6 172 -67 192 77 0 0 chr17 39254025 39254051 -50250502 + (TG)n Simple_repeat Simple_repeat 1 26 0 285 262 0 0 chr17 39254386 39254447 -50250106 + L2 LINE L2 3200 3260 -12 1894 159 14 7 chr17 39254447 39254743 -50249810 + AluJo SINE Alu 1 298 -14 393 297 179 20 chr17 39254823 39255069 -50249484 - L1ME4a LINE L1 -28 6093 5809 385 282 43 54 chr17 39255084 39255361 -50249192 + L1ME3A LINE L1 2675 2948 -3198 2083 138 0 0 chr17 39255361 39255695 -50248858 + AluSx SINE Alu 1 334 0 5030 131 84 104 chr17 39255700 39255744 -50248809 + L1MC3 LINE L1 6378 6421 -1364 531 139 0 0 chr17 39255744 39255830 -50248723 - L1PA13 LINE L1 -3 6160 6075 5030 131 84 104 chr17 39255830 39256506 -50248047 + L1MC3 LINE L1 6421 7109 -676 278 333 0 0 chr17 39256506 39256593 -50247960 + MLT1F1 LTR MaLR 39 125 -442 2312 98 3 0 chr17 39256596 39256891 -50247662 + AluSx SINE Alu 5 300 -12 5030 131 84 104 chr17 39256891 39257080 -50247473 + L1MC3 LINE L1 7111 7302 -483 2175 75 3 39 chr17 39257080 39257397 -50247156 + AluSx SINE Alu 12 318 0 5030 131 84 104 chr17 39257397 39257615 -50246938 + L1MC3 LINE L1 7302 7574 -211 1305 140 12 66 chr17 39257616 39257873 -50246680 - L1MA4 LINE L1 -437 5863 5621 26 0 0 0 chr17 39257903 39257929 -50246624 + AT_rich Low_complexity Low_complexity 1 26 0 1036 156 13 34 chr17 39257936 39258015 -50246538 + L1MC3 LINE L1 7552 7631 -154 1807 128 68 0 chr17 39258015 39258266 -50246287 + AluJb SINE Alu 1 268 -44 306 0 0 0 chr17 39258266 39258300 -50246253 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1036 156 13 34 chr17 39258300 39258456 -50246097 + L1MC3 LINE L1 7629 7783 -2 256 225 79 11 chr17 39258446 39258535 -50246018 + L1ME3A LINE L1 2926 3020 -3126 * 1061 278 71 10 chr17 39258540 39258849 -50245704 + MLT1I LTR MaLR 1 328 -81 414 249 96 39 chr17 39259121 39259507 -50245046 + L1ME3A LINE L1 4984 5391 -755 756 234 11 21 chr17 39259563 39259751 -50244802 + AluJb SINE Alu 121 306 -6 507 143 0 0 chr17 39259831 39259915 -50244638 + AluJ/FRAM SINE Alu 229 312 0 429 318 63 31 chr17 39259920 39260238 -50244315 + L1ME3A LINE L1 5610 5937 -233 249 81 27 0 chr17 39260464 39260501 -50244052 - LTR33A LTR ERVL 0 523 486 * 447 233 61 33 chr17 39260471 39260651 -50243902 - LTR41 LTR ERVL -6 767 583 593 228 54 54 chr17 39260891 39261075 -50243478 - LTR41 LTR ERVL -589 184 1 2133 141 7 0 chr17 39261242 39261539 -50243014 + AluSx SINE Alu 1 299 -13 361 297 29 14 chr17 39261712 39261850 -50242703 + L1M4 LINE L1 2148 2287 -3859 3220 134 29 20 chr17 39262162 39262264 -50242289 + L1MB3 LINE L1 5587 5687 -496 2261 124 0 0 chr17 39262264 39262571 -50241982 + AluSx SINE Alu 1 307 -5 3220 134 29 20 chr17 39262571 39263059 -50241494 + L1MB3 LINE L1 5687 6182 -1 2266 120 10 0 chr17 39263069 39263378 -50241175 + AluSx SINE Alu 1 312 0 349 254 107 8 chr17 39263720 39263842 -50240711 + MIR SINE MIR 20 153 -109 1280 175 35 4 chr17 39264049 39264306 -50240247 - L1MD2 LINE L1 0 6359 6095 775 160 0 0 chr17 39264492 39264617 -50239936 + FLAM_C SINE Alu 1 125 -8 249 33 0 0 chr17 39264617 39264647 -50239906 + (GA)n Simple_repeat Simple_repeat 2 31 0 281 306 88 31 chr17 39265246 39265406 -50239147 + MIR SINE MIR 80 248 -14 606 97 26 0 chr17 39265719 39265832 -50238721 + CT-rich Low_complexity Low_complexity 1 116 0 391 307 0 0 chr17 39267422 39267523 -50237030 + MIR SINE MIR 111 211 -51 405 301 104 11 chr17 39267893 39268076 -50236477 + L2 LINE L2 2605 2804 -510 1709 188 17 11 chr17 39268583 39268870 -50235683 + AluJb SINE Alu 2 290 -22 1816 165 13 25 chr17 39268933 39269318 -50235235 + AluJo SINE Alu 1 381 0 346 292 102 42 chr17 39269368 39269652 -50234901 - MLT1K LTR MaLR 0 588 288 1409 236 107 40 chr17 39269656 39270232 -50234321 + MLT1G LTR MaLR 1 576 -14 1071 282 40 21 chr17 39270442 39270595 -50233958 - L1ME4a LINE L1 -126 5995 5846 2032 139 0 20 chr17 39270595 39270890 -50233663 - AluJo SINE Alu -12 300 12 1071 282 40 21 chr17 39270890 39271165 -50233388 - L1ME4a LINE L1 -275 5846 5559 798 156 11 15 chr17 39271165 39271431 -50233122 + CT-rich Low_complexity Low_complexity 1 264 0 1963 172 0 3 chr17 39271436 39271733 -50232820 - AluJb SINE Alu -16 296 1 2983 3 0 0 chr17 39271748 39272059 -50232494 - AluYa5 SINE Alu 0 311 1 461 291 123 19 chr17 39272086 39272347 -50232206 - L1ME4a LINE L1 -2266 5542 5255 2387 109 0 0 chr17 39272412 39272715 -50231838 - AluSg SINE Alu -7 303 1 1400 219 58 26 chr17 39273315 39273694 -50230859 + LTR16A1 LTR ERVL 65 455 -2 576 208 71 38 chr17 39274166 39274349 -50230204 + MLT1K LTR MaLR 393 581 -7 302 274 142 18 chr17 39274796 39274909 -50229644 + MIR SINE MIR 20 146 -116 334 335 91 23 chr17 39275544 39275765 -50228788 - MIR SINE MIR -6 256 21 596 306 42 14 chr17 39276143 39276389 -50228164 + MIR SINE MIR 11 259 -3 1815 159 3 32 chr17 39276394 39276708 -50227845 + AluJo SINE Alu 1 305 -7 1051 205 40 9 chr17 39276784 39277008 -50227545 - MIR SINE MIR 0 262 32 2114 118 0 21 chr17 39277316 39277605 -50226948 - AluSq SINE Alu -29 284 2 609 212 8 30 chr17 39277612 39277744 -50226809 - FLAM_C SINE Alu -4 129 1 183 300 0 17 chr17 39277745 39277805 -50226748 - L2 LINE L2 -349 2964 2906 548 303 37 6 chr17 39278452 39278642 -50225911 + MIR SINE MIR 9 202 -60 235 304 0 0 chr17 39279151 39279220 -50225333 + MIR SINE MIR 63 131 -77 326 23 23 0 chr17 39279310 39279353 -50225200 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 185 341 23 0 chr17 39279392 39279480 -50225073 + MIR3 SINE MIR 109 198 -10 241 301 124 13 chr17 39280187 39280340 -50224213 + MIR SINE MIR 89 258 -4 183 267 0 0 chr17 39281057 39281102 -50223451 + MIR SINE MIR 108 152 -56 1044 88 0 29 chr17 39281104 39281241 -50223312 + AluSq/x SINE Alu 1 133 -179 264 167 0 0 chr17 39281358 39281406 -50223147 + CT-rich Low_complexity Low_complexity 3 50 0 478 246 43 22 chr17 39281809 39281947 -50222606 - MLT1J1 LTR MaLR -239 207 67 5606 99 4 2 chr17 39281947 39282329 -50222224 - L1PA15 LINE L1 -2 6163 5783 1866 109 16 8 chr17 39282329 39282586 -50221967 - AluSq SINE Alu -54 259 1 5606 99 4 2 chr17 39282586 39283034 -50221519 - L1PA15 LINE L1 -382 5783 5332 184 330 140 10 chr17 39283275 39283375 -50221178 + L2 LINE L2 2924 3036 -277 847 173 0 0 chr17 39283423 39283556 -50220997 + AluJo SINE Alu 1 133 -179 381 260 39 65 chr17 39283560 39283714 -50220839 - MIR3 SINE MIR -48 160 11 339 323 0 32 chr17 39283740 39283864 -50220689 + MIR3 SINE MIR 59 178 -30 387 246 48 32 chr17 39284030 39284156 -50220397 - MIR SINE MIR -37 225 98 309 366 69 27 chr17 39284159 39284421 -50220132 + L3 LINE CR1 1276 1548 -29 695 263 48 24 chr17 39284421 39284672 -50219881 - MER113 DNA MER1_type? -50 471 215 303 207 78 35 chr17 39284681 39284797 -50219756 - MER113 DNA MER1_type? -275 246 126 4403 141 24 41 chr17 39284807 39285710 -50218843 + L1MC2 LINE L1 5186 6073 -271 1662 263 65 4 chr17 39285710 39286190 -50218363 + L1ME3 LINE L1 5632 6140 -22 307 247 47 0 chr17 39286832 39286917 -50217636 - L3 LINE CR1 -58 1519 1431 983 196 12 0 chr17 39287209 39287377 -50217176 + AluJo SINE Alu 137 306 -6 276 87 0 87 chr17 39287379 39287448 -50217105 + (GGGAA)n Simple_repeat Simple_repeat 2 64 0 183 42 0 0 chr17 39287821 39287845 -50216708 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1071 143 7 0 chr17 39287848 39287995 -50216558 - AluJo/FRAM SINE Alu -31 281 134 2012 127 31 10 chr17 39287995 39288287 -50216266 - AluSx SINE Alu -14 298 1 1920 154 0 16 chr17 39288287 39288592 -50215961 - AluJb SINE Alu -12 300 1 380 125 200 67 chr17 39288602 39288722 -50215831 - MIR SINE MIR -107 155 20 314 289 195 8 chr17 39290092 39290220 -50214333 + MIR3 SINE MIR 20 171 -37 325 303 136 13 chr17 39291133 39291288 -50213265 - MIR SINE MIR 0 262 89 189 311 87 10 chr17 39291386 39291489 -50213064 - MIR SINE MIR -58 150 40 403 255 70 38 chr17 39292882 39293039 -50211514 - MIR SINE MIR -13 249 88 346 345 28 14 chr17 39293098 39293243 -50211310 + MIR3 SINE MIR 3 149 -59 2280 89 4 0 chr17 39293463 39293782 -50210771 + AluSx SINE Alu 1 320 0 2335 119 3 0 chr17 39293861 39294171 -50210382 + AluSx SINE Alu 1 311 -1 352 299 28 0 chr17 39294171 39294278 -50210275 + MIR SINE MIR 145 254 -8 3641 166 43 45 chr17 39294845 39294939 -50209614 + L1MB4 LINE L1 5350 5443 -737 1910 115 65 11 chr17 39294939 39295218 -50209335 + AluSx SINE Alu 1 294 -18 3641 166 43 45 chr17 39295218 39295955 -50208598 + L1MB4 LINE L1 5443 6180 0 437 263 6 17 chr17 39296840 39297019 -50207534 + (CA)n Simple_repeat Simple_repeat 1 177 0 432 265 6 17 chr17 39297057 39297238 -50207315 + (CA)n Simple_repeat Simple_repeat 1 179 0 314 276 0 43 chr17 39297163 39297348 -50207205 + (CTCA)n Simple_repeat Simple_repeat 2 178 0 * 433 247 19 13 chr17 39297382 39297540 -50207013 + (CA)n Simple_repeat Simple_repeat 1 159 0 451 282 0 28 chr17 39297563 39297744 -50206809 + (CA)n Simple_repeat Simple_repeat 2 177 0 322 288 0 20 chr17 39297759 39297905 -50206648 + (CA)n Simple_repeat Simple_repeat 1 143 0 349 292 0 32 chr17 39297943 39298128 -50206425 + (CA)n Simple_repeat Simple_repeat 1 179 0 313 343 12 0 chr17 39298204 39298376 -50206177 + (CA)n Simple_repeat Simple_repeat 1 174 0 298 291 13 0 chr17 39298453 39298532 -50206021 - MIR3 SINE MIR -15 193 114 213 307 27 13 chr17 39298651 39298726 -50205827 + MIR SINE MIR 137 212 -50 180 77 0 0 chr17 39299253 39299279 -50205274 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 835 235 18 0 chr17 39299406 39299576 -50204977 - MER63A DNA MER1_type -37 173 1 205 198 11 33 chr17 39299685 39299745 -50204808 + MIR SINE MIR 104 160 -102 481 289 128 13 chr17 39299758 39299823 -50204730 - MER5A DNA MER1_type -9 180 124 1653 177 19 53 chr17 39299823 39300201 -50204352 - MLT1A1 LTR MaLR 0 365 1 481 289 128 13 chr17 39300201 39300291 -50204262 - MER5A DNA MER1_type -65 124 7 2133 123 13 10 chr17 39300980 39301280 -50203273 - AluSx SINE Alu -11 301 1 180 267 0 0 chr17 39301304 39301349 -50203204 + L2 LINE L2 3143 3187 -85 531 90 0 0 chr17 39302253 39302331 -50202222 + (TTCA)n Simple_repeat Simple_repeat 1 78 0 999 267 90 15 chr17 39302331 39302394 -50202159 - L2 LINE L2 -10 3303 3246 1905 185 25 2 chr17 39302394 39302799 -50201754 + L1MB4 LINE L1 5767 6180 0 2160 137 0 3 chr17 39302805 39303118 -50201435 + AluSx SINE Alu 1 312 0 999 267 90 15 chr17 39303118 39303501 -50201052 - L2 LINE L2 -71 3242 2812 2482 103 0 0 chr17 39303931 39304242 -50200311 - AluSx SINE Alu -1 311 1 1246 245 109 17 chr17 39304588 39305366 -50199187 + L2 LINE L2 2457 3313 0 302 180 18 5 chr17 39305472 39305551 -50199002 - MIR SINE MIR -65 143 64 285 281 62 31 chr17 39306340 39306436 -50198117 + MIR SINE MIR 159 257 -5 287 302 12 12 chr17 39306846 39306932 -50197621 - MIR SINE MIR -117 145 60 806 302 0 12 chr17 39307090 39307332 -50197221 - MIR SINE MIR -22 240 2 335 306 98 29 chr17 39310046 39310219 -50194334 - L3 LINE CR1 -24 1553 1369 421 224 15 82 chr17 39310763 39310897 -50193656 - L3 LINE CR1 -207 1370 1246 2413 92 0 13 chr17 39311229 39311543 -50193010 + AluSx SINE Alu 1 310 -2 234 268 31 10 chr17 39311894 39311991 -50192562 + (TG)n Simple_repeat Simple_repeat 1 99 0 289 380 73 27 chr17 39312083 39312233 -50192320 + L2 LINE L2 3107 3263 -9 219 69 0 0 chr17 39312243 39312272 -50192281 + (AACTG)n Simple_repeat Simple_repeat 4 32 0 183 129 0 0 chr17 39312470 39312501 -50192052 + (TG)n Simple_repeat Simple_repeat 1 31 0 1006 229 39 92 chr17 39313603 39314039 -50190514 + L1ME3A LINE L1 5749 6161 -9 2855 187 39 34 chr17 39314206 39314981 -50189572 - L1M4 LINE L1 -2804 3342 2564 342 297 0 20 chr17 39315249 39315350 -50189203 - MIR3 SINE MIR -22 186 88 413 273 19 14 chr17 39315527 39315654 -50188899 + MIR SINE MIR 22 142 -66 474 294 35 25 chr17 39316024 39316221 -50188332 + L1MC5 LINE L1 7715 7913 -48 215 30 0 30 chr17 39316912 39316945 -50187608 + (CA)n Simple_repeat Simple_repeat 1 32 0 302 307 11 6 chr17 39316967 39317143 -50187410 + (CA)n Simple_repeat Simple_repeat 1 177 0 418 194 11 17 chr17 39317182 39317362 -50187191 + (CA)n Simple_repeat Simple_repeat 1 179 0 198 227 0 0 chr17 39317472 39317547 -50187006 + (CA)n Simple_repeat Simple_repeat 1 75 0 366 253 0 0 chr17 39317567 39317741 -50186812 + (CA)n Simple_repeat Simple_repeat 2 175 0 238 253 0 12 chr17 39317755 39317921 -50186632 + (CA)n Simple_repeat Simple_repeat 2 165 0 223 242 0 0 chr17 39317970 39318032 -50186521 + (CA)n Simple_repeat Simple_repeat 2 63 0 203 270 79 11 chr17 39318108 39318197 -50186356 + MIR SINE MIR 95 189 -73 218 268 73 0 chr17 39318604 39318686 -50185867 - MIR SINE MIR -115 147 60 247 265 0 0 chr17 39319078 39319127 -50185426 + polypyrimidine Low_complexity Low_complexity 1 49 0 263 224 188 0 chr17 39319294 39319379 -50185174 + MIR SINE MIR 119 219 -43 2187 129 0 10 chr17 39319388 39319699 -50184854 + AluSx SINE Alu 1 308 -4 311 149 52 3 chr17 39319719 39319789 -50184764 + AluJ/FLAM SINE Alu 1 58 -244 971 171 6 0 chr17 39319789 39319947 -50184606 - AluJo SINE Alu -139 173 15 2676 133 50 26 chr17 39320052 39320549 -50184004 - L1MA6 LINE L1 -188 6112 5604 798 188 0 0 chr17 39320570 39320735 -50183818 + CT-rich Low_complexity Low_complexity 4 168 0 731 212 0 0 chr17 39320737 39320869 -50183684 - FRAM SINE Alu -13 163 32 1357 187 33 0 chr17 39320869 39321142 -50183411 - L1MA6 LINE L1 -847 5299 5018 399 250 73 8 chr17 39321145 39321269 -50183284 - MIR3 SINE MIR -14 194 63 1784 213 24 37 chr17 39321396 39321861 -50182692 - MLT1C LTR MaLR -1 466 8 1613 168 44 47 chr17 39322528 39322826 -50181727 + AluJo SINE Alu 1 297 -15 2087 102 0 71 chr17 39322828 39323137 -50181416 + AluSx SINE Alu 1 300 -12 234 57 29 0 chr17 39323137 39323172 -50181381 + (TAAAA)n Simple_repeat Simple_repeat 5 75 0 2087 102 0 71 chr17 39323172 39323185 -50181368 + AluSx SINE Alu 300 312 0 794 153 0 0 chr17 39324116 39324240 -50180313 + FLAM_C SINE Alu 1 124 -9 273 109 0 0 chr17 39324240 39324286 -50180267 + (TA)n Simple_repeat Simple_repeat 2 47 0 182 304 0 0 chr17 39325166 39325212 -50179341 - L2 LINE L2 -12 3301 3256 1975 157 0 40 chr17 39325230 39325555 -50178998 + AluJo SINE Alu 1 312 0 481 187 60 45 chr17 39325584 39325718 -50178835 + AluJo SINE Alu 7 142 -170 215 30 0 30 chr17 39326054 39326087 -50178466 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1712 158 11 0 chr17 39326095 39326355 -50178198 - AluJb SINE Alu -49 263 1 235 203 85 0 chr17 39326727 39326786 -50177767 - L2 LINE L2 -1 3312 3249 207 318 0 0 chr17 39327031 39327094 -50177459 + MIR SINE MIR 84 146 -116 800 169 6 42 chr17 39327096 39327262 -50177291 + L1MD3 LINE L1 7834 7993 -2 2260 95 0 3 chr17 39327318 39327625 -50176928 - AluSx SINE Alu 0 306 1 2046 126 4 0 chr17 39327625 39327903 -50176650 - AluSq SINE Alu -34 279 1 344 282 115 35 chr17 39327929 39328103 -50176450 - MIR SINE MIR -71 191 4 332 243 25 30 chr17 39328689 39328818 -50175735 + MIR SINE MIR 33 160 -66 185 274 65 16 chr17 39328967 39329029 -50175524 + L2 LINE L2 3156 3220 -52 365 235 0 0 chr17 39329077 39329145 -50175408 - MIR SINE MIR -88 174 107 213 237 0 0 chr17 39329237 39329296 -50175257 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 338 237 29 12 chr17 39329355 39329528 -50175025 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 418 279 130 7 chr17 39330100 39330254 -50174299 - MIR3 SINE MIR -3 205 33 420 285 44 37 chr17 39330805 39331011 -50173542 - MIR SINE MIR -48 214 2 297 289 103 53 chr17 39331259 39331522 -50173031 + L2 LINE L2 2878 3153 -119 267 278 53 23 chr17 39331967 39332100 -50172453 + MIR3 SINE MIR 44 180 -28 472 212 60 33 chr17 39332242 39332393 -50172160 - MIR SINE MIR -1 261 107 186 43 0 0 chr17 39332665 39332688 -50171865 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 208 366 10 0 chr17 39332822 39332923 -50171630 + MIR3 SINE MIR 62 163 -45 192 250 118 0 chr17 39335025 39335101 -50169452 + L2 LINE L2 3187 3271 -1 272 258 16 0 chr17 39335393 39335455 -50169098 + MIR SINE MIR 112 174 -88 326 250 17 136 chr17 39336138 39336314 -50168239 - MER5B DNA MER1_type -15 163 9 195 219 0 0 chr17 39336356 39336397 -50168156 - L2 LINE L2 -3 3269 3229 513 285 22 22 chr17 39336595 39336774 -50167779 - MIR SINE MIR -6 256 78 264 284 274 0 chr17 39337812 39337914 -50166639 - L2 LINE L2 0 3272 3143 2369 99 0 3 chr17 39340691 39340994 -50163559 + AluSx SINE Alu 1 302 -10 312 247 54 11 chr17 39342059 39342152 -50162401 - L2 LINE L2 -28 3285 3189 318 224 215 0 chr17 39342275 39342382 -50162171 + MIR SINE MIR 21 150 -58 1850 109 148 42 chr17 39342385 39342589 -50161964 - MSTA LTR MaLR -2 426 245 2402 86 0 0 chr17 39342589 39342881 -50161672 - AluSg SINE Alu -18 292 1 1850 109 148 42 chr17 39342881 39343061 -50161492 - MSTA LTR MaLR -183 245 1 574 309 26 10 chr17 39343065 39343259 -50161294 - L2 LINE L2 0 3313 3117 228 158 0 0 chr17 39343269 39343307 -50161246 + L1MC/D LINE L1 5713 5750 -492 323 313 89 41 chr17 39343308 39343554 -50160999 - L2 LINE L2 -420 2894 2637 1523 241 131 22 chr17 39343556 39344298 -50160255 + L1ME3 LINE L1 5323 6153 -9 1062 109 0 7 chr17 39344455 39344602 -50159951 + AluJb SINE Alu 164 309 -3 1795 121 62 49 chr17 39344634 39344941 -50159612 + AluJo SINE Alu 1 311 -1 289 282 107 47 chr17 39344984 39345183 -50159370 + MIR SINE MIR 32 261 -1 229 262 24 0 chr17 39345261 39345281 -50159272 - HAL1b LINE L1 -30 1318 1299 330 181 38 95 chr17 39345281 39345386 -50159167 - L1ME4a LINE L1 -60 6061 1233 315 228 0 30 chr17 39345405 39345506 -50159047 - HAL1b LINE L1 0 1348 1251 288 304 0 38 chr17 39346693 39346772 -50157781 - MIR SINE MIR -70 192 117 933 234 21 11 chr17 39346779 39347065 -50157488 + MER33 DNA MER1_type 1 289 -35 2001 160 0 3 chr17 39347136 39347430 -50157123 + AluJb SINE Alu 1 293 -19 830 184 119 0 chr17 39347430 39347615 -50156938 - MER58A DNA MER1_type -17 207 1 339 333 70 0 chr17 39347635 39347764 -50156789 + MIR SINE MIR 8 145 -117 1756 239 60 34 chr17 39347764 39348377 -50156176 + L1ME4a LINE L1 5306 5961 -160 2338 78 4 0 chr17 39348377 39348680 -50155873 + AluSp SINE Alu 1 304 0 1756 239 60 34 chr17 39348680 39348842 -50155711 + L1ME4a LINE L1 5961 6117 -4 507 321 113 50 chr17 39348871 39349350 -50155203 + L1ME LINE L1 5310 5818 -303 627 237 79 75 chr17 39349585 39349754 -50154799 + MIR SINE MIR 16 188 -74 1947 140 50 0 chr17 39349754 39350033 -50154520 + AluSx SINE Alu 1 293 -19 627 237 79 75 chr17 39350033 39350091 -50154462 + MIR SINE MIR 188 244 -18 415 280 172 11 chr17 39350304 39350490 -50154063 + MIR SINE MIR 31 246 -16 437 301 45 46 chr17 39350719 39350919 -50153634 + MIR SINE MIR 3 200 -62 2399 108 0 0 chr17 39351180 39351485 -50153068 + AluSx SINE Alu 1 305 -7 202 244 0 0 chr17 39351505 39351550 -50153003 + (TAA)n Simple_repeat Simple_repeat 2 46 0 581 274 72 24 chr17 39351553 39351761 -50152792 - MIR SINE MIR -32 230 13 232 283 0 0 chr17 39352946 39353019 -50151534 + C-rich Low_complexity Low_complexity 1 73 0 238 304 74 15 chr17 39355608 39355743 -50148810 - MIR SINE MIR -7 255 113 201 213 0 0 chr17 39356290 39356337 -50148216 + (TG)n Simple_repeat Simple_repeat 2 48 0 249 372 53 18 chr17 39357491 39357717 -50146836 - L2 LINE L2 -212 3060 2827 1077 275 0 26 chr17 39358483 39358752 -50145801 - MIR SINE MIR 0 262 1 380 263 197 0 chr17 39359014 39359151 -50145402 + MIR3 SINE MIR 19 182 -26 297 273 0 0 chr17 39359151 39359217 -50145336 + MIR3 SINE MIR 129 194 -14 646 268 0 18 chr17 39359221 39359389 -50145164 + MER5B DNA MER1_type 2 166 -12 244 247 96 0 chr17 39360652 39360725 -50143828 + MIR SINE MIR 112 191 -71 26 93 0 0 chr17 39360787 39360862 -50143691 + AT_rich Low_complexity Low_complexity 1 75 0 203 321 0 46 chr17 39361338 39361469 -50143084 + CT-rich Low_complexity Low_complexity 3 127 0 438 110 25 42 chr17 39361493 39361611 -50142942 + CT-rich Low_complexity Low_complexity 1 116 0 331 248 53 110 chr17 39361923 39362129 -50142424 + MIR SINE MIR 16 210 -52 2122 104 0 24 chr17 39362303 39362621 -50141932 + AluSg SINE Alu 2 312 0 455 279 7 15 chr17 39362653 39362789 -50141764 - MIR SINE MIR -117 145 11 414 201 60 60 chr17 39364247 39364275 -50140278 + L2 LINE L2 3178 3205 -108 2359 99 3 3 chr17 39364275 39364578 -50139975 + AluSp SINE Alu 1 303 -10 414 201 60 60 chr17 39364578 39364683 -50139870 + L2 LINE L2 3204 3311 -2 276 238 43 162 chr17 39364714 39364899 -50139654 - MIR SINE MIR -93 169 7 779 121 0 24 chr17 39365150 39365274 -50139279 + FLAM_C SINE Alu 1 121 -12 22 56 0 0 chr17 39365281 39365317 -50139236 + AT_rich Low_complexity Low_complexity 1 36 0 258 226 75 0 chr17 39365476 39365529 -50139024 - MIR SINE MIR -87 175 119 495 265 45 58 chr17 39365545 39365768 -50138785 - L2 LINE L2 -1 3312 3093 206 189 0 19 chr17 39365865 39365918 -50138635 + GA-rich Low_complexity Low_complexity 4 55 0 549 316 11 37 chr17 39366150 39366367 -50138186 + MIR SINE MIR 3 212 -50 560 254 146 0 chr17 39367228 39367393 -50137160 + MER5A DNA MER1_type 1 189 0 263 320 82 8 chr17 39368490 39368612 -50135941 - L2 LINE L2 -9 3263 3133 421 301 110 38 chr17 39368657 39368893 -50135660 + MIR SINE MIR 9 261 -1 591 249 30 24 chr17 39369556 39369721 -50134832 + MIR SINE MIR 20 185 -77 255 306 59 0 chr17 39369787 39369835 -50134718 - L2 LINE L2 -34 3279 3235 2498 100 0 0 chr17 39369835 39370146 -50134407 + AluSx SINE Alu 1 311 -1 255 306 59 0 chr17 39370146 39370182 -50134371 - L2 LINE L2 -78 3235 3190 228 304 161 18 chr17 39370244 39370412 -50134141 - L3 LINE CR1 -81 1496 1305 397 204 71 0 chr17 39370625 39370738 -50133815 + LTR16C LTR ERVL 371 491 0 180 268 49 24 chr17 39372316 39372398 -50132155 - MIR SINE MIR -80 128 45 294 120 0 20 chr17 39372628 39372678 -50131875 + MLT1K LTR MaLR 510 558 -30 386 346 26 6 chr17 39372780 39372936 -50131617 - MIR3 SINE MIR -48 160 2 918 301 75 27 chr17 39373789 39374124 -50130429 + MLT1I LTR MaLR 59 409 0 218 255 59 111 chr17 39374174 39374630 -50129923 + MER5A DNA MER1_type 2 146 -43 269 339 61 42 chr17 39374211 39374253 -50130300 - MER5A DNA MER1_type -21 168 128 2138 122 3 0 chr17 39374253 39374557 -50129996 - AluSx SINE Alu -7 305 1 269 339 61 42 chr17 39374557 39374679 -50129874 - MER5A DNA MER1_type -61 128 1 220 229 0 0 chr17 39375038 39375086 -50129467 + A-rich Low_complexity Low_complexity 1 48 0 936 129 0 168 chr17 39376082 39376314 -50128239 - 7SK RNA RNA 0 193 1 2545 47 0 0 chr17 39376762 39377061 -50127492 + AluY SINE Alu 1 299 -12 183 290 72 0 chr17 39377153 39377222 -50127331 - MIR SINE MIR -144 118 45 552 271 73 26 chr17 39377388 39377580 -50126973 + MIR SINE MIR 10 210 -52 182 354 24 24 chr17 39379174 39379301 -50125252 + MIR SINE MIR 22 148 -114 299 370 35 13 chr17 39379342 39379577 -50124976 + MIR SINE MIR 2 242 -20 211 222 0 48 chr17 39379579 39379642 -50124911 + L2 LINE L2 3201 3260 -12 2140 116 0 0 chr17 39379644 39379945 -50124608 + AluSx SINE Alu 1 301 -11 213 309 0 29 chr17 39380121 39380189 -50124364 - MIR SINE MIR -116 146 81 4254 82 12 21 chr17 39380206 39380630 -50123923 + MER41A LTR ERV1 1 420 -134 2317 77 7 0 chr17 39380630 39380929 -50123624 - AluSp SINE Alu -12 301 1 4254 82 12 21 chr17 39380929 39381063 -50123490 + MER41A LTR ERV1 420 554 0 522 326 63 17 chr17 39381152 39381391 -50123162 - MIR SINE MIR -1 261 12 356 319 61 57 chr17 39381818 39382047 -50122506 + MIR SINE MIR 24 253 -9 270 160 0 0 chr17 39382054 39382104 -50122449 + CT-rich Low_complexity Low_complexity 1 50 0 298 318 75 0 chr17 39382395 39382542 -50122011 - MIR3 SINE MIR -12 196 36 343 263 40 0 chr17 39383253 39383352 -50121201 - MER5B DNA MER1_type 0 178 76 1176 209 134 73 chr17 39383352 39383447 -50121106 - MLT1F1 LTR MaLR -7 535 447 2705 87 37 15 chr17 39383447 39383806 -50120747 - L1PB1 LINE L1 0 6151 5801 252 0 0 0 chr17 39383806 39383834 -50120719 + (TG)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr17 39383833 39383854 -50120699 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 2705 87 37 15 chr17 39383834 39383897 -50120656 - L1PB1 LINE L1 -350 5801 5740 1176 209 134 73 chr17 39383897 39384307 -50120246 - MLT1F1 LTR MaLR -95 447 1 385 208 13 0 chr17 39384312 39384389 -50120164 - MER5B DNA MER1_type -100 78 1 2170 131 0 0 chr17 39384799 39385111 -50119442 - AluSx SINE Alu 0 312 1 213 226 0 0 chr17 39385113 39385166 -50119387 + CT-rich Low_complexity Low_complexity 2 54 0 198 219 0 0 chr17 39385606 39385670 -50118883 + CT-rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr17 39386094 39386115 -50118438 + AT_rich Low_complexity Low_complexity 1 21 0 409 282 267 0 chr17 39386923 39387118 -50117435 + MIR SINE MIR 13 259 -3 439 319 49 49 chr17 39387170 39387396 -50117157 - MIR SINE MIR -17 245 20 214 67 44 44 chr17 39387518 39387563 -50116990 + GA-rich Low_complexity Low_complexity 4 48 0 1058 171 11 0 chr17 39387684 39387859 -50116694 + AluSg/x SINE Alu 135 311 -1 251 229 0 16 chr17 39387859 39387920 -50116633 + GA-rich Low_complexity Low_complexity 1 60 0 366 302 31 31 chr17 39387960 39388089 -50116464 + L1ME3A LINE L1 6037 6165 -5 330 143 18 0 chr17 39388102 39388158 -50116395 + L1MB7 LINE L1 6128 6184 0 2127 117 3 0 chr17 39388680 39388979 -50115574 - AluSq SINE Alu -13 300 1 1891 155 0 0 chr17 39388988 39389284 -50115269 - AluJo SINE Alu -15 297 2 411 286 8 0 chr17 39389462 39389581 -50114972 - MER103 DNA DNA -44 122 3 587 299 108 5 chr17 39389653 39389823 -50114730 + MIR SINE MIR 21 219 -43 2024 116 3 0 chr17 39389823 39390107 -50114446 + AluSx SINE Alu 1 285 -27 587 299 108 5 chr17 39390107 39390150 -50114403 + MIR SINE MIR 219 256 -6 733 256 64 39 chr17 39390359 39390593 -50113960 + MIR SINE MIR 23 262 0 2623 153 5 21 chr17 39390827 39391258 -50113295 - MSTB LTR MaLR -2 424 1 194 328 156 16 chr17 39391414 39391542 -50113011 - MIR SINE MIR -115 147 2 197 354 38 32 chr17 39392967 39393125 -50111428 - L2 LINE L2 -466 2848 2690 978 292 8 4 chr17 39393609 39393849 -50110704 + MIR SINE MIR 16 256 -6 189 307 44 88 chr17 39393831 39393851 -50110702 - L2 LINE L2 -8 3305 3286 * 2423 69 0 0 chr17 39393851 39394155 -50110398 - AluY SINE Alu -7 304 1 189 307 44 88 chr17 39394155 39394248 -50110305 - L2 LINE L2 -27 3286 3197 220 319 138 0 chr17 39394449 39394565 -50109988 + L2 LINE L2 2929 3060 -212 835 161 0 15 chr17 39395033 39395348 -50109205 + FLAM_C SINE Alu 2 314 0 369 317 83 0 chr17 39395683 39395828 -50108725 + MIR SINE MIR 20 176 -86 2062 102 0 11 chr17 39395950 39396263 -50108290 - AluSc SINE Alu 0 310 1 219 295 0 0 chr17 39396439 39396551 -50108002 + (TG)n Simple_repeat Simple_repeat 2 113 0 516 356 0 0 chr17 39396586 39396760 -50107793 + (TG)n Simple_repeat Simple_repeat 1 174 0 183 257 0 0 chr17 39396775 39396849 -50107704 + (TG)n Simple_repeat Simple_repeat 2 75 0 230 298 0 36 chr17 39396856 39396940 -50107613 + GA-rich Low_complexity Low_complexity 4 84 0 508 285 14 0 chr17 39397472 39397616 -50106937 + MIR3 SINE MIR 63 208 0 398 261 123 0 chr17 39398287 39398417 -50106136 + MIR SINE MIR 113 258 -4 347 362 90 1 chr17 39399022 39399190 -50105363 + MIR SINE MIR 8 188 -62 982 185 21 5 chr17 39399694 39399883 -50104670 - AluJb SINE Alu -17 295 104 251 298 65 6 chr17 39399978 39400144 -50104409 + MIR SINE MIR 23 196 -62 224 265 0 0 chr17 39400694 39400756 -50103797 + C-rich Low_complexity Low_complexity 1 62 0 680 204 0 6 chr17 39400994 39401166 -50103387 + (TG)n Simple_repeat Simple_repeat 1 171 0 196 274 0 0 chr17 39401913 39401964 -50102589 + L2 LINE L2 3139 3189 -83 318 290 120 43 chr17 39402067 39402260 -50102293 + MIR SINE MIR 32 250 -12 297 0 0 0 chr17 39402372 39402405 -50102148 + (CA)n Simple_repeat Simple_repeat 2 34 0 1558 169 32 14 chr17 39403247 39403351 -50101202 + AluJb SINE Alu 16 117 -195 207 0 0 0 chr17 39403351 39403374 -50101179 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1558 169 32 14 chr17 39403374 39403553 -50101000 + AluJb SINE Alu 117 304 -8 403 323 41 10 chr17 39403557 39403752 -50100801 - MIR SINE MIR -56 206 6 495 229 171 7 chr17 39403767 39403907 -50100646 - L1M4 LINE L1 -1043 5103 4941 295 264 16 16 chr17 39404339 39404468 -50100085 + (TG)n Simple_repeat Simple_repeat 1 129 0 231 191 0 0 chr17 39404713 39404755 -50099798 + C-rich Low_complexity Low_complexity 3 44 0 393 305 136 0 chr17 39405359 39405513 -50099040 + MER91A DNA MER1_type 2 176 -20 206 171 24 0 chr17 39405562 39405603 -50098950 + MER91A DNA MER1_type 149 190 0 1861 121 29 0 chr17 39405671 39406037 -50098516 + AluSg SINE Alu 1 374 0 1767 184 26 0 chr17 39406046 39406455 -50098098 + AluJb SINE Alu 1 417 0 238 146 18 18 chr17 39406563 39406618 -50097935 + CT-rich Low_complexity Low_complexity 2 56 0 312 27 0 0 chr17 39406618 39406655 -50097898 + (CA)n Simple_repeat Simple_repeat 1 37 0 424 260 130 18 chr17 39407048 39407271 -50097282 - MIR SINE MIR -3 259 12 784 237 26 11 chr17 39407324 39407535 -50097018 - MIR SINE MIR -15 247 34 330 26 0 0 chr17 39408534 39408573 -50095980 + (CA)n Simple_repeat Simple_repeat 2 40 0 2091 119 0 0 chr17 39409216 39409511 -50095042 + AluSx SINE Alu 1 295 -17 180 326 92 31 chr17 39410057 39410155 -50094398 - MIR SINE MIR -77 131 28 1873 120 46 0 chr17 39410213 39410497 -50094056 + AluJb SINE Alu 1 297 -15 249 250 0 0 chr17 39411455 39411519 -50093034 + (CA)n Simple_repeat Simple_repeat 2 65 0 364 263 38 13 chr17 39411618 39411735 -50092818 + MIR3 SINE MIR 70 193 -15 425 329 7 7 chr17 39411792 39411935 -50092618 + MIR SINE MIR 16 158 -104 189 0 0 0 chr17 39412683 39412704 -50091849 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 186 43 0 0 chr17 39412943 39412966 -50091587 + (GA)n Simple_repeat Simple_repeat 2 24 0 220 143 12 48 chr17 39413070 39413154 -50091399 + GA-rich Low_complexity Low_complexity 1 81 0 359 294 61 31 chr17 39413684 39413847 -50090706 - MIR SINE MIR -82 180 13 329 256 8 85 chr17 39414659 39414788 -50089765 - L2 LINE L2 0 3313 3195 416 233 139 23 chr17 39415341 39415491 -50089062 + MIR SINE MIR 37 197 -65 280 268 0 14 chr17 39415674 39415745 -50088808 + MIR3 SINE MIR 107 176 -32 180 152 0 0 chr17 39415953 39415986 -50088567 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1602 110 25 4 chr17 39417708 39417953 -50086600 + AluSx SINE Alu 63 312 0 2609 165 50 20 chr17 39417967 39418463 -50086090 + L1MB8 LINE L1 5668 6178 0 1099 230 36 0 chr17 39418466 39418748 -50085805 + L1MB7 LINE L1 5864 6184 0 669 130 106 0 chr17 39418748 39418871 -50085682 - MER5A DNA MER1_type -53 136 1 255 212 91 30 chr17 39420112 39420178 -50084375 + L2 LINE L2 3153 3222 -50 183 80 0 0 chr17 39420198 39420223 -50084330 + (ATG)n Simple_repeat Simple_repeat 3 27 0 424 276 5 82 chr17 39420228 39420291 -50084262 - MIR SINE MIR -10 252 186 2210 117 0 0 chr17 39420291 39420600 -50083953 - AluSg SINE Alu -1 309 1 424 276 5 82 chr17 39420600 39420732 -50083821 - MIR SINE MIR -76 186 72 197 309 65 50 chr17 39421319 39421458 -50083095 - MIR3 SINE MIR -10 198 58 195 268 71 0 chr17 39421594 39421650 -50082903 - MIR SINE MIR -97 165 106 1701 168 3 3 chr17 39422116 39422413 -50082140 + AluJb SINE Alu 1 297 -15 309 252 148 9 chr17 39422514 39422629 -50081924 + L1ME4a LINE L1 5990 6120 -1 954 205 0 0 chr17 39422637 39422803 -50081750 - FRAM SINE Alu 0 166 1 388 300 23 0 chr17 39423935 39424073 -50080480 + L1ME LINE L1 5677 5818 -303 672 162 29 6 chr17 39424958 39425131 -50079422 + CT-rich Low_complexity Low_complexity 3 179 0 989 87 0 0 chr17 39426508 39426634 -50077919 + AluSq/x SINE Alu 23 148 -165 298 256 150 15 chr17 39427050 39427183 -50077370 - MIR SINE MIR -44 218 68 320 270 16 71 chr17 39427342 39427468 -50077085 - MIR SINE MIR -60 202 84 405 314 66 15 chr17 39427518 39427655 -50076898 - MIR SINE MIR -23 239 96 232 281 0 0 chr17 39427748 39427805 -50076748 + L2 LINE L2 3248 3304 -9 332 59 20 0 chr17 39429669 39429720 -50074833 + (TC)n Simple_repeat Simple_repeat 1 52 0 520 298 162 5 chr17 39429769 39429960 -50074593 + MIR SINE MIR 35 255 -7 770 168 24 0 chr17 39430354 39430479 -50074074 + FLAM_C SINE Alu 2 129 -14 186 372 44 7 chr17 39430485 39430622 -50073931 + MIR SINE MIR 121 262 0 2059 116 23 7 chr17 39430665 39430968 -50073585 + AluSx SINE Alu 1 308 -4 253 269 65 32 chr17 39431551 39431644 -50072909 - MIR SINE MIR -55 207 112 231 295 66 57 chr17 39431768 39431890 -50072663 + MIR3 SINE MIR 5 127 -81 1985 113 10 0 chr17 39431986 39432277 -50072276 + AluSx SINE Alu 5 298 -14 2203 106 10 0 chr17 39432880 39433356 -50071197 + AluSx SINE Alu 1 479 0 206 196 18 18 chr17 39434473 39434529 -50070024 + (CAGAGA)n Simple_repeat Simple_repeat 5 60 0 2289 97 0 0 chr17 39436071 39436371 -50068182 - AluSx SINE Alu -12 300 1 280 287 29 0 chr17 39436642 39436778 -50067775 + (CA)n Simple_repeat Simple_repeat 1 140 0 315 335 70 6 chr17 39437566 39437724 -50066829 - MIR SINE MIR -75 187 20 587 258 169 31 chr17 39438001 39438327 -50066226 - L3 LINE CR1 -24 1553 1183 4881 170 18 10 chr17 39438391 39438978 -50065575 + L1MB2 LINE L1 5073 5677 -494 2152 114 20 0 chr17 39438978 39439275 -50065278 - AluSx SINE Alu -9 303 1 4881 170 18 10 chr17 39439275 39439737 -50064816 + L1MB2 LINE L1 5677 6134 -37 488 268 109 0 chr17 39439741 39439879 -50064674 + MIR SINE MIR 20 172 -90 584 225 390 22 chr17 39440032 39440388 -50064165 + L2 LINE L2 2821 3307 -6 2206 92 0 10 chr17 39440965 39441269 -50063284 + AluSx SINE Alu 1 301 -11 338 260 91 45 chr17 39441313 39441467 -50063086 - MIR SINE MIR -63 199 39 1580 138 47 30 chr17 39441643 39441940 -50062613 + AluJo SINE Alu 9 310 -2 197 352 14 0 chr17 39442448 39442519 -50062034 - L2 LINE L2 0 3313 3242 2130 86 18 0 chr17 39442634 39442947 -50061606 - AluSx SINE Alu 0 318 1 2260 82 7 0 chr17 39442986 39443279 -50061274 - AluSp SINE Alu -15 298 4 301 263 306 0 chr17 39443878 39444038 -50060515 - MIR SINE MIR -3 259 51 231 114 0 0 chr17 39444553 39444588 -50059965 + (CAT)n Simple_repeat Simple_repeat 3 37 0 745 201 6 45 chr17 39444594 39444773 -50059780 - MIR SINE MIR -3 259 88 718 280 17 34 chr17 39445807 39446046 -50058507 - MIR SINE MIR -20 242 8 1783 217 89 31 chr17 39446675 39447159 -50057394 - MLT2B1 LTR ERVL -8 512 1 405 292 34 39 chr17 39447488 39447545 -50057008 - MER5B DNA MER1_type 0 178 122 2187 109 0 3 chr17 39447545 39447848 -50056705 + AluSx SINE Alu 1 302 -10 405 292 34 39 chr17 39447848 39447968 -50056585 - MER5B DNA MER1_type -56 122 2 2440 57 0 0 chr17 39448128 39448427 -50056126 + AluY SINE Alu 1 299 -12 1952 104 11 18 chr17 39448448 39448728 -50055825 + AluSx SINE Alu 14 291 -21 324 270 228 21 chr17 39448839 39449028 -50055525 - MIR SINE MIR -13 249 22 988 184 32 5 chr17 39449033 39449223 -50055330 + MER20 DNA MER1_type 17 211 -8 504 245 101 0 chr17 39449239 39449398 -50055155 + MER5B DNA MER1_type 3 177 -1 246 135 0 0 chr17 39449712 39449749 -50054804 - MIR SINE MIR -71 191 155 1759 159 7 10 chr17 39451021 39451322 -50053231 - AluJb SINE Alu -9 303 4 1524 139 87 45 chr17 39451357 39451451 -50053102 + AluSx SINE Alu 1 90 -222 2314 84 3 3 chr17 39451451 39451759 -50052794 + AluSp SINE Alu 3 310 -3 2154 86 3 26 chr17 39451759 39452063 -50052490 + AluSx SINE Alu 3 299 -13 1524 139 87 45 chr17 39452063 39452255 -50052298 + AluSx SINE Alu 89 300 -12 359 223 48 58 chr17 39452318 39452421 -50052132 - L2 LINE L2 0 3313 3212 1568 249 249 9 chr17 39452421 39453009 -50051544 - L2 LINE L2 -244 3069 2623 197 65 32 0 chr17 39453009 39453040 -50051513 + (CAA)n Simple_repeat Simple_repeat 3 34 0 1568 249 249 9 chr17 39453040 39453191 -50051362 - L2 LINE L2 -690 2623 2153 1425 156 14 78 chr17 39453196 39453491 -50051062 + AluJo SINE Alu 1 276 -36 207 0 0 0 chr17 39453493 39453516 -50051037 + (TC)n Simple_repeat Simple_repeat 2 24 0 2228 105 0 0 chr17 39453516 39453812 -50050741 - AluSq SINE Alu -17 296 1 2012 116 17 0 chr17 39453853 39454145 -50050408 - AluY SINE Alu -14 297 1 851 288 121 0 chr17 39454167 39454473 -50050080 - L2 LINE L2 -1156 2158 1816 506 285 144 25 chr17 39454478 39454762 -50049791 - L2 LINE L2 -1639 1675 1358 1087 128 147 92 chr17 39454833 39454971 -50049582 + MER33 DNA MER1_type 2 131 -2454 1770 151 18 0 chr17 39454971 39455255 -50049298 + AluSq SINE Alu 1 289 -24 1087 128 147 92 chr17 39455255 39455422 -50049131 + MER33 DNA MER1_type 131 324 0 282 330 80 0 chr17 39459239 39459339 -50045214 - MIR SINE MIR -58 150 43 232 364 68 8 chr17 39460251 39460383 -50044170 - MIR SINE MIR -52 210 71 333 264 35 0 chr17 39461639 39461726 -50042827 - MIR3 SINE MIR -5 203 114 323 220 211 9 chr17 39462043 39462152 -50042401 - L2 LINE L2 -1 3312 3182 526 240 111 65 chr17 39462155 39462210 -50042343 + MER102b DNA MER1_type 113 164 -1264 2050 94 7 20 chr17 39462210 39462507 -50042046 + AluSc SINE Alu 1 293 -16 526 240 111 65 chr17 39462507 39462668 -50041885 + MER102b DNA MER1_type 164 339 -2 226 304 14 0 chr17 39462695 39462764 -50041789 - MIR SINE MIR -118 144 75 2134 121 0 10 chr17 39462947 39463261 -50041292 + AluSx SINE Alu 1 311 -1 1726 114 76 4 chr17 39463954 39464244 -50040309 + AluSx SINE Alu 1 309 0 28 0 0 0 chr17 39466851 39466879 -50037674 + GC_rich Low_complexity Low_complexity 1 28 0 262 242 200 8 chr17 39467401 39467521 -50037032 - MIR SINE MIR 0 262 120 23 33 0 0 chr17 39468832 39468862 -50035691 + AT_rich Low_complexity Low_complexity 1 30 0 998 113 19 25 chr17 39469912 39470072 -50034481 + AluSg/x SINE Alu 142 300 -10 2238 83 10 0 chr17 39470113 39470414 -50034139 + AluSp SINE Alu 1 304 -9 2184 101 0 0 chr17 39470775 39471062 -50033491 - AluSc SINE Alu -22 287 1 405 281 0 0 chr17 39471104 39471193 -50033360 + Tigger5 DNA MER2_type 2234 2322 -1 21 36 0 0 chr17 39471722 39471750 -50032803 + AT_rich Low_complexity Low_complexity 1 28 0 2009 138 0 0 chr17 39471750 39472039 -50032514 + AluSx SINE Alu 1 289 -23 227 337 43 0 chr17 39472105 39472197 -50032356 - MIR SINE MIR -14 248 153 2807 168 84 52 chr17 39473434 39473694 -50030859 + Charlie1a DNA MER1_type 67 317 -2444 1708 155 16 30 chr17 39473694 39473998 -50030555 - AluJo SINE Alu -8 304 5 418 169 0 0 chr17 39473937 39474002 -50030551 - AluJ/FLAM SINE Alu -237 65 1 * 2807 168 84 52 chr17 39474002 39474031 -50030522 + Charlie1a DNA MER1_type 321 347 -2414 2093 129 0 0 chr17 39474031 39474325 -50030228 + AluSx SINE Alu 1 294 -18 2807 168 84 52 chr17 39474325 39474906 -50029647 + Charlie1a DNA MER1_type 347 908 -1853 1874 156 0 14 chr17 39474906 39475201 -50029352 + AluSx SINE Alu 1 291 -21 2807 168 84 52 chr17 39475201 39475318 -50029235 + Charlie1a DNA MER1_type 908 1020 -1741 2498 62 0 0 chr17 39475318 39475606 -50028947 + AluSc SINE Alu 2 289 -20 2807 168 84 52 chr17 39475606 39475885 -50028668 + Charlie1a DNA MER1_type 1020 1454 -1 927 149 43 12 chr17 39476110 39476271 -50028282 - MER2 DNA MER2_type 0 345 180 1141 114 13 0 chr17 39476271 39476429 -50028124 - AluSg/x SINE Alu -16 296 137 1080 141 31 52 chr17 39476430 39476490 -50028063 - MER2 DNA MER2_type -158 187 127 1779 181 0 3 chr17 39476490 39476783 -50027770 + AluJb SINE Alu 1 292 -20 1080 141 31 52 chr17 39476783 39476913 -50027640 - MER2 DNA MER2_type -218 127 1 35 0 0 0 chr17 39476916 39476951 -50027602 + AT_rich Low_complexity Low_complexity 1 35 0 736 133 0 17 chr17 39476951 39477071 -50027482 - FLAM_C SINE Alu -15 118 1 2561 60 0 3 chr17 39477366 39477666 -50026887 - AluY SINE Alu -12 299 1 2116 136 3 0 chr17 39477736 39478031 -50026522 - AluSx SINE Alu -16 296 1 2469 76 0 16 chr17 39478157 39478471 -50026082 + AluY SINE Alu 1 309 -2 2451 91 3 0 chr17 39478631 39478940 -50025613 - AluSq SINE Alu -3 310 1 298 313 100 61 chr17 39481569 39481879 -50022674 + L2 LINE L2 2155 2476 -838 476 194 19 0 chr17 39481981 39482089 -50022464 + (CATATA)n Simple_repeat Simple_repeat 3 112 0 2372 92 0 6 chr17 39482089 39482403 -50022150 - AluSx SINE Alu 0 312 1 2267 78 4 0 chr17 39482541 39482850 -50021703 + AluSp SINE Alu 1 310 0 2112 128 0 3 chr17 39482902 39483198 -50021355 - AluSx SINE Alu -17 295 1 2406 90 0 0 chr17 39483307 39483606 -50020947 + AluSq SINE Alu 1 299 -14 360 0 0 0 chr17 39483606 39483646 -50020907 + (TA)n Simple_repeat Simple_repeat 2 41 0 676 158 24 36 chr17 39483748 39483913 -50020640 + L1MB1 LINE L1 4974 5136 -1010 198 143 0 0 chr17 39484025 39484060 -50020493 + (CTGGGG)n Simple_repeat Simple_repeat 6 40 0 636 135 58 0 chr17 39484857 39484961 -50019592 - Tigger3(Golem) DNA MER2_type 0 3038 2929 22 0 0 0 chr17 39484962 39484984 -50019569 + AT_rich Low_complexity Low_complexity 1 22 0 481 215 0 0 chr17 39485059 39485138 -50019415 - Tigger3(Golem) DNA MER2_type -2949 80 2 721 188 57 11 chr17 39485139 39485315 -50019238 + L1MB1 LINE L1 5146 5329 -817 406 119 45 0 chr17 39485315 39485382 -50019171 + AluJ/FRAM SINE Alu 228 297 -5 3729 139 40 101 chr17 39485394 39485871 -50018682 + L1MB1 LINE L1 5316 5716 -452 2147 98 7 0 chr17 39485871 39486148 -50018405 + AluSx SINE Alu 25 303 -9 3729 139 40 101 chr17 39486148 39486554 -50017999 + L1MB1 LINE L1 5716 6145 -23 1611 175 25 18 chr17 39486560 39486846 -50017707 - AluJb SINE Alu -24 288 1 1704 144 16 77 chr17 39487198 39487387 -50017166 - AluJo SINE Alu -19 293 94 2411 80 0 6 chr17 39487387 39487700 -50016853 - AluY SINE Alu 0 311 1 2085 115 10 3 chr17 39487702 39487990 -50016563 - AluSg SINE Alu -20 290 1 1704 144 16 77 chr17 39487990 39488109 -50016444 - AluJo SINE Alu -219 93 1 329 95 0 0 chr17 39488169 39488211 -50016342 + U2 snRNA snRNA 1 42 -146 2131 128 3 0 chr17 39488231 39488521 -50016032 - AluSx SINE Alu -21 291 1 2316 103 0 13 chr17 39488531 39488842 -50015711 - AluSq SINE Alu -6 307 1 1605 180 3 41 chr17 39488847 39489164 -50015389 - AluJb SINE Alu -7 305 1 1937 136 31 0 chr17 39489844 39490130 -50014423 - AluSx SINE Alu -17 295 1 2098 128 3 0 chr17 39490207 39490503 -50014050 + AluSc SINE Alu 1 297 -12 2167 117 10 0 chr17 39490666 39490964 -50013589 + AluSx SINE Alu 1 301 -11 2304 103 0 0 chr17 39491036 39491328 -50013225 + AluSc SINE Alu 1 292 -17 772 163 0 22 chr17 39492240 39492375 -50012178 - FLAM_C SINE Alu 0 133 2 1752 130 6 73 chr17 39492566 39492882 -50011671 - AluJo SINE Alu -17 295 1 2338 90 0 0 chr17 39493354 39493644 -50010909 - AluSg SINE Alu -20 290 1 437 262 193 13 chr17 39493981 39494214 -50010339 + L2 LINE L2 1824 2098 -1216 29 0 0 0 chr17 39495171 39495200 -50009353 + AT_rich Low_complexity Low_complexity 1 29 0 2333 88 3 25 chr17 39495215 39495534 -50009019 + AluSx SINE Alu 1 312 0 433 257 107 34 chr17 39495606 39495960 -50008593 + L1MC5 LINE L1 7538 7917 -44 2198 113 0 0 chr17 39495963 39496276 -50008277 - AluSq SINE Alu 0 313 1 2296 101 37 0 chr17 39496276 39496574 -50007979 - AluSg SINE Alu -1 309 1 2080 128 3 13 chr17 39496790 39497096 -50007457 + AluSx SINE Alu 1 303 -9 2365 85 3 0 chr17 39497336 39497641 -50006912 + AluY SINE Alu 1 306 -5 2247 107 7 0 chr17 39497837 39498136 -50006417 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr17 39498161 39498190 -50006363 + AT_rich Low_complexity Low_complexity 1 29 0 704 211 0 15 chr17 39498710 39498843 -50005710 + FLAM_A SINE Alu 2 132 -1 222 277 0 15 chr17 39498935 39499000 -50005553 + L2 LINE L2 2483 2546 -768 785 201 0 8 chr17 39499002 39499136 -50005417 + AluJo SINE Alu 2 134 -178 1787 124 66 15 chr17 39499138 39499411 -50005142 + AluSg SINE Alu 1 287 -23 828 231 15 46 chr17 39499453 39499713 -50004840 + L2 LINE L2 2537 2788 -526 893 259 241 29 chr17 39499717 39499934 -50004619 + L2 LINE L2 2108 2278 -1035 2257 104 10 0 chr17 39499934 39500241 -50004312 - AluSx SINE Alu -2 310 1 893 259 241 29 chr17 39500241 39500503 -50004050 + L2 LINE L2 2278 2483 -830 2151 108 3 3 chr17 39500503 39500798 -50003755 + AluSq SINE Alu 1 295 -18 893 259 241 29 chr17 39500798 39500820 -50003733 + L2 LINE L2 2483 2499 -814 2259 104 3 3 chr17 39500820 39501127 -50003426 - AluSq SINE Alu -6 307 1 2291 98 0 0 chr17 39501131 39501427 -50003126 - AluSg SINE Alu -14 296 1 893 259 241 29 chr17 39501427 39501754 -50002799 + L2 LINE L2 2501 3174 -139 252 0 0 0 chr17 39502478 39502506 -50002047 + (A)n Simple_repeat Simple_repeat 1 28 0 2396 90 0 10 chr17 39502524 39502834 -50001719 - AluSc SINE Alu -2 307 1 194 0 39 0 chr17 39502834 39502860 -50001693 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1703 128 76 30 chr17 39503314 39503554 -50000999 - MER2 DNA MER2_type 0 344 84 1662 195 0 7 chr17 39503554 39503846 -50000707 - AluJb SINE Alu -22 290 1 1703 128 76 30 chr17 39503846 39503933 -50000620 - MER2 DNA MER2_type -260 84 2 2238 97 6 31 chr17 39504582 39504903 -49999650 + AluSp SINE Alu 1 313 0 2079 106 64 0 chr17 39504930 39505213 -49999340 - AluSx SINE Alu -11 301 1 279 214 152 45 chr17 39505419 39505531 -49999022 - MER104 DNA Tc2 -51 129 6 2246 119 0 3 chr17 39506216 39506519 -49998034 - AluSx SINE Alu -10 302 1 23 0 0 0 chr17 39506887 39506910 -49997643 + AT_rich Low_complexity Low_complexity 1 23 0 2008 108 54 4 chr17 39507418 39507696 -49996857 - AluSx SINE Alu -20 292 1 2185 95 14 3 chr17 39507763 39508048 -49996505 + AluSp SINE Alu 10 297 -16 185 65 32 0 chr17 39508909 39508940 -49995613 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 2280 107 0 0 chr17 39509020 39509320 -49995233 + AluSx SINE Alu 1 300 -12 598 234 145 21 chr17 39509327 39509617 -49994936 + L1ME4a LINE L1 5572 5897 -224 2282 94 0 10 chr17 39509752 39510050 -49994503 + AluSx SINE Alu 1 295 -17 1840 153 3 7 chr17 39510302 39510596 -49993957 - AluSx SINE Alu -19 293 1 2477 99 0 0 chr17 39510620 39510933 -49993620 - AluSq SINE Alu 0 313 1 21 36 0 0 chr17 39513416 39513444 -49991109 + GC_rich Low_complexity Low_complexity 1 28 0 269 229 0 21 chr17 39513535 39513631 -49990922 + (CCG)n Simple_repeat Simple_repeat 2 95 0 201 39 0 0 chr17 39513841 39513867 -49990686 + (CCCG)n Simple_repeat Simple_repeat 3 28 0 21 0 0 0 chr17 39513982 39514003 -49990550 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 39514377 39514407 -49990146 + GC_rich Low_complexity Low_complexity 1 30 0 2352 81 0 7 chr17 39515331 39515629 -49988924 + AluSq SINE Alu 1 296 -17 2146 94 14 0 chr17 39515805 39516092 -49988461 + AluSx SINE Alu 1 291 -21 1685 119 0 0 chr17 39516242 39516478 -49988075 + AluSq SINE Alu 1 236 -77 2569 48 0 0 chr17 39516545 39516840 -49987713 - AluY SINE Alu -16 295 1 210 71 0 0 chr17 39517217 39517245 -49987308 + (CTAAT)n Simple_repeat Simple_repeat 3 30 0 201 103 51 0 chr17 39517245 39517284 -49987269 + (CAATA)n Simple_repeat Simple_repeat 5 45 0 1579 58 11 0 chr17 39518013 39518204 -49986349 + AluY SINE Alu 1 193 -118 426 102 0 0 chr17 39518204 39518263 -49986290 + AluY SINE Alu 236 294 -18 2268 114 3 0 chr17 39518588 39518885 -49985668 + AluSx SINE Alu 1 298 -14 585 111 111 0 chr17 39518925 39519015 -49985538 + AluJb SINE Alu 19 118 -194 207 257 95 27 chr17 39519471 39519545 -49985008 + L2 LINE L2 3134 3212 -60 867 127 16 0 chr17 39519640 39519766 -49984787 - FLAM_C SINE Alu -5 128 1 25 51 0 0 chr17 39519808 39519847 -49984706 + AT_rich Low_complexity Low_complexity 1 39 0 1967 118 7 4 chr17 39520136 39520406 -49984147 + AluSx SINE Alu 23 293 -19 3830 47 6 12 chr17 39521746 39522238 -49982315 + L1PA8 LINE L1 5683 6171 -1 2403 73 3 0 chr17 39522371 39522674 -49981879 + AluY SINE Alu 1 304 -7 2367 84 10 3 chr17 39523261 39523570 -49980983 - AluSx SINE Alu -1 311 1 420 223 0 0 chr17 39523720 39523814 -49980739 + AluS SINE Alu 2 95 -218 746 154 16 0 chr17 39524207 39524330 -49980223 - AluSx SINE Alu -150 162 38 2264 102 3 10 chr17 39524341 39524645 -49979908 + AluSp SINE Alu 1 302 -11 993 254 76 53 chr17 39524761 39524840 -49979713 + L1MDa LINE L1 2404 2480 -4060 2114 139 7 0 chr17 39524840 39525141 -49979412 + AluSx SINE Alu 6 308 -4 993 254 76 53 chr17 39525141 39525212 -49979341 + L1MDa LINE L1 2480 2548 -3992 1852 136 9 28 chr17 39525212 39525529 -49979024 + AluSx SINE Alu 1 311 -1 993 254 76 53 chr17 39525529 39525563 -49978990 + L1MDa LINE L1 2548 2580 -3960 1889 156 0 0 chr17 39525563 39525864 -49978689 + AluJo SINE Alu 1 301 -11 1945 145 0 3 chr17 39525864 39526174 -49978379 + AluSg SINE Alu 1 309 -1 993 254 76 53 chr17 39526174 39526645 -49977908 + L1MDa LINE L1 2579 3076 -3464 1306 113 10 21 chr17 39526645 39526839 -49977714 - AluSg/x SINE Alu -13 297 106 396 165 53 83 chr17 39526857 39526903 -49977650 + L1MD1 LINE L1 5317 5363 -879 682 160 0 0 chr17 39526903 39527009 -49977544 + U6 snRNA snRNA 2 107 0 396 165 53 83 chr17 39527009 39527095 -49977458 + L1MD1 LINE L1 5363 5445 -797 887 189 136 45 chr17 39527103 39527374 -49977179 + AluJo SINE Alu 21 313 0 1040 197 132 62 chr17 39527376 39527622 -49976931 + L1MD1 LINE L1 5433 5660 -582 198 0 0 0 chr17 39527622 39527644 -49976909 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1674 128 45 0 chr17 39527649 39527915 -49976638 - AluSx SINE Alu -34 278 1 1040 197 132 62 chr17 39527915 39528060 -49976493 + L1MD1 LINE L1 5663 6045 -197 286 95 0 0 chr17 39528059 39528101 -49976452 + L1M4c LINE L1 17 58 -6326 * 1840 88 4 0 chr17 39528101 39528350 -49976203 + AluSp SINE Alu 63 312 -1 2319 209 29 31 chr17 39528370 39528711 -49975842 + L1 LINE L1 4432 4773 -1373 2249 105 0 0 chr17 39528711 39529017 -49975536 + AluSp SINE Alu 2 307 -6 2319 209 29 31 chr17 39529017 39529264 -49975289 + L1 LINE L1 4773 5019 -1127 2709 3 0 0 chr17 39529276 39529576 -49974977 + AluYa5 SINE Alu 1 300 -11 2068 99 0 3 chr17 39529588 39529903 -49974650 + AluY SINE Alu 1 314 0 2087 106 10 0 chr17 39530156 39530458 -49974095 + AluSg SINE Alu 1 305 -5 181 289 116 66 chr17 39530778 39530899 -49973654 + L2 LINE L2 2944 3070 -202 184 333 50 0 chr17 39530950 39531010 -49973543 - L2 LINE L2 -5 3267 3205 435 349 74 0 chr17 39531087 39531236 -49973317 + L2 LINE L2 3113 3272 0 2453 84 27 7 chr17 39531560 39532004 -49972549 + L1P3 LINE L1 5148 5593 -561 717 105 0 9 chr17 39532276 39532381 -49972172 + L1P3 LINE L1 5598 5701 -453 188 200 22 0 chr17 39532681 39532726 -49971827 - MIR SINE MIR -94 168 123 467 287 35 14 chr17 39533317 39533460 -49971093 + MIR SINE MIR 47 192 -70 551 217 17 0 chr17 39533488 39533608 -49970945 + MER20 DNA MER1_type 98 219 0 461 297 21 14 chr17 39533618 39533763 -49970790 + MIR SINE MIR 20 165 -97 2856 3 0 0 chr17 39533763 39534078 -49970475 + AluYb8 SINE Alu 1 315 -3 1952 114 7 17 chr17 39534099 39534235 -49970318 + AluSx SINE Alu 1 137 -175 2082 110 0 3 chr17 39534235 39534526 -49970027 + AluSc SINE Alu 1 290 -19 1952 114 7 17 chr17 39534526 39534688 -49969865 + AluSx SINE Alu 137 296 -16 1760 151 7 7 chr17 39534951 39535255 -49969298 + AluJb SINE Alu 1 304 -8 2234 94 0 0 chr17 39535260 39535568 -49968985 + AluY SINE Alu 1 308 -3 1911 123 10 13 chr17 39535602 39535902 -49968651 + AluSg SINE Alu 2 300 -10 1995 118 0 0 chr17 39536005 39536304 -49968249 - AluSg SINE Alu 0 299 1 186 43 0 0 chr17 39536407 39536430 -49968123 + (A)n Simple_repeat Simple_repeat 1 23 0 854 190 12 0 chr17 39536435 39536598 -49967955 + FRAM SINE Alu 1 164 -12 1222 287 90 41 chr17 39536599 39536733 -49967820 + L1MEc LINE L1 1023 1149 -5247 2201 95 7 3 chr17 39536733 39537038 -49967515 + AluSp SINE Alu 1 306 -7 1222 287 90 41 chr17 39537038 39537859 -49966694 + L1MEc LINE L1 1149 2025 -4371 1117 234 86 16 chr17 39537916 39538287 -49966266 + L1MB7 LINE L1 4936 5332 -814 1820 102 75 17 chr17 39538287 39538580 -49965973 + AluSg SINE Alu 1 310 0 2422 210 86 7 chr17 39538580 39539185 -49965368 + L1MB7 LINE L1 5426 6078 -106 241 302 52 0 chr17 39539188 39539304 -49965249 + L1MEc LINE L1 2272 2393 -4003 1769 149 0 23 chr17 39539305 39539627 -49964926 + AluSx SINE Alu 1 312 0 1145 246 109 62 chr17 39539644 39540044 -49964509 + L1MEc LINE L1 2445 2825 -3390 1838 133 0 18 chr17 39540044 39540329 -49964224 + AluSx SINE Alu 1 280 -32 811 86 31 0 chr17 39540329 39540457 -49964096 + (AAATG)n Simple_repeat Simple_repeat 2 133 0 1145 246 109 62 chr17 39540457 39540604 -49963949 + L1MEc LINE L1 2825 2964 -3251 4084 137 21 6 chr17 39540604 39541230 -49963323 + MER41B LTR ERV1 1 635 0 1145 246 109 62 chr17 39541230 39541769 -49962784 + L1MEc LINE L1 2964 3850 -2365 1366 130 49 37 chr17 39541772 39542018 -49962535 + AluSx SINE Alu 1 249 -63 405 224 164 11 chr17 39542031 39542214 -49962339 + L1MEc LINE L1 3836 4046 -2169 569 259 22 0 chr17 39542224 39542359 -49962194 + MER74A LTR ERVL 421 558 0 2261 224 121 57 chr17 39542362 39542746 -49961807 + L1MEc LINE L1 4064 4422 -1809 1776 139 42 0 chr17 39542746 39543034 -49961519 + AluSx SINE Alu 1 300 -12 2261 224 121 57 chr17 39543034 39543765 -49960788 + L1MEc LINE L1 4422 5290 -941 2199 33 44 0 chr17 39543765 39544076 -49960477 + AluY SINE Alu 1 323 0 2261 224 121 57 chr17 39544076 39544323 -49960230 + L1MEc LINE L1 5290 5520 -711 2205 266 65 42 chr17 39544319 39545412 -49959141 + L1MEc LINE L1 44 1161 -5235 * 304 333 52 33 chr17 39545420 39545573 -49958980 + L1MEc LINE L1 1213 1368 -5028 1219 186 62 69 chr17 39545602 39545739 -49958814 + AluJb SINE Alu 1 137 -165 203 0 37 0 chr17 39545739 39545766 -49958787 + (CA)n Simple_repeat Simple_repeat 1 28 0 2227 87 7 0 chr17 39545774 39546073 -49958480 + AluSp SINE Alu 1 301 -12 1219 186 62 69 chr17 39546073 39546217 -49958336 + AluJb SINE Alu 144 289 -13 634 279 18 14 chr17 39546275 39546550 -49958003 + L1MEc LINE L1 2355 2629 -3586 725 196 21 21 chr17 39546565 39546708 -49957845 + AluJo SINE Alu 2 144 -168 1935 119 0 0 chr17 39546708 39546985 -49957568 + AluSx SINE Alu 1 277 -35 1047 221 130 32 chr17 39546985 39547291 -49957262 + L1MEc LINE L1 2641 2915 -3300 1972 103 4 4 chr17 39547291 39547572 -49956981 + AluSg1 SINE Alu 1 281 -28 239 54 27 0 chr17 39547572 39547609 -49956944 + (CATAA)n Simple_repeat Simple_repeat 4 41 0 1047 221 130 32 chr17 39547609 39547807 -49956746 + L1MEc LINE L1 2914 3196 -3019 1125 221 42 35 chr17 39547822 39548111 -49956442 + L1MDa LINE L1 2 292 -6248 1887 124 30 0 chr17 39548112 39548411 -49956142 + AluSq SINE Alu 1 308 -5 520 179 24 140 chr17 39548411 39548618 -49955935 + L1MDa LINE L1 996 1178 -5362 446 103 0 0 chr17 39548618 39548713 -49955840 - AluSc SINE Alu 0 318 224 1346 150 12 8 chr17 39548827 39549074 -49955479 - AluSc SINE Alu -61 248 1 293 296 127 42 chr17 39549268 39549481 -49955072 - MIR SINE MIR -29 233 3 2071 100 0 7 chr17 39549539 39549828 -49954725 + AluY SINE Alu 1 287 -24 624 196 0 0 chr17 39549909 39550016 -49954537 - FLAM_A SINE Alu -17 125 19 2105 104 3 0 chr17 39550175 39550474 -49954079 - AluSg SINE Alu -10 300 1 357 267 78 0 chr17 39550852 39550942 -49953611 + MER117 DNA MER1_type 4 100 -97 252 325 131 25 chr17 39550944 39551218 -49953335 - L2 LINE L2 -1221 2093 1791 302 359 124 34 chr17 39551406 39551793 -49952760 - L2 LINE L2 -1906 1408 987 614 207 25 0 chr17 39552483 39552604 -49951949 + MLT1C LTR MaLR 344 467 0 231 211 125 77 chr17 39552671 39552775 -49951778 - MER113 DNA MER1_type? -7 514 406 2953 154 15 8 chr17 39552798 39553279 -49951274 + MER1A DNA MER1_type 46 529 0 572 220 0 32 chr17 39553494 39553680 -49950873 + (CA)n Simple_repeat Simple_repeat 1 180 0 308 225 20 7 chr17 39554208 39554359 -49950194 + CT-rich Low_complexity Low_complexity 2 154 0 258 116 0 0 chr17 39554684 39554727 -49949826 + (TGGGGG)n Simple_repeat Simple_repeat 4 46 0 1529 165 109 26 chr17 39555532 39555872 -49948681 + THE1C LTR MaLR 7 374 -1 330 26 0 0 chr17 39555977 39556016 -49948537 + (CCCCAG)n Simple_repeat Simple_repeat 3 41 0 1790 190 24 3 chr17 39556335 39556672 -49947881 + MER2 DNA MER2_type 1 344 0 227 313 82 61 chr17 39557707 39557854 -49946699 - MIR SINE MIR -19 243 94 181 264 48 96 chr17 39557834 39557959 -49946594 + MIR SINE MIR 18 136 -72 * 2139 93 36 0 chr17 39558827 39559128 -49945425 + AluSx SINE Alu 1 312 0 1112 141 180 12 chr17 39559731 39559987 -49944566 + AluJb SINE Alu 2 300 -2 292 261 33 22 chr17 39561691 39561783 -49942770 - MIR SINE MIR -51 211 119 414 277 80 15 chr17 39562434 39562571 -49941982 - MIR SINE MIR -65 197 52 225 299 30 0 chr17 39563261 39563328 -49941225 - L3b LINE CR1 -190 1393 1325 353 303 42 8 chr17 39563436 39563555 -49940998 - L2 LINE L2 -215 3057 2935 193 253 141 40 chr17 39563758 39563857 -49940696 - L2 LINE L2 -19 3253 3145 243 159 130 0 chr17 39564168 39564237 -49940316 + L1ME4a LINE L1 5999 6076 -45 2291 82 0 3 chr17 39564237 39564540 -49940013 - AluY SINE Alu -9 302 1 781 129 21 57 chr17 39564556 39564696 -49939857 - AluSq/x SINE Alu -177 136 2 2151 125 0 0 chr17 39564732 39565036 -49939517 + AluSx SINE Alu 1 304 -8 1234 39 7 0 chr17 39565046 39565200 -49939353 + AluY SINE Alu 150 304 -7 237 125 100 0 chr17 39565290 39565330 -49939223 - MIR SINE MIR -93 169 126 945 176 31 11 chr17 39565343 39565571 -49938982 - AluJo SINE Alu -26 286 2 860 191 0 0 chr17 39565577 39565729 -49938824 - FRAM SINE Alu -4 172 21 447 307 16 8 chr17 39565732 39565859 -49938694 - MIR SINE MIR -127 135 8 933 180 0 0 chr17 39566337 39566498 -49938055 + FRAM SINE Alu 10 170 -6 736 279 88 9 chr17 39566833 39567059 -49937494 - MIR SINE MIR -10 252 9 2219 92 0 10 chr17 39567119 39567425 -49937128 - AluY SINE Alu -8 303 1 1848 140 48 0 chr17 39568460 39568753 -49935800 - AluSp SINE Alu -6 307 1 2055 118 0 0 chr17 39568756 39569045 -49935508 - AluSx SINE Alu -22 290 2 189 284 49 49 chr17 39569749 39569830 -49934723 + L2 LINE L2 3187 3267 -5 361 184 26 13 chr17 39569869 39569945 -49934608 + MIR SINE MIR 72 148 -114 247 278 35 78 chr17 39570577 39570692 -49933861 + MIR SINE MIR 25 134 -74 343 314 13 59 chr17 39570776 39570929 -49933624 + MIR SINE MIR 97 242 -20 2167 220 123 105 chr17 39571650 39572438 -49932115 - HAL1 LINE L1 -1 2506 1734 1881 123 19 29 chr17 39572438 39572614 -49931939 - AluSq SINE Alu -1 312 139 2410 71 3 0 chr17 39572614 39572924 -49931629 - AluY SINE Alu 0 311 1 1881 123 19 29 chr17 39572924 39573057 -49931496 - AluSq SINE Alu -174 139 6 2167 220 123 105 chr17 39573057 39573121 -49931432 - HAL1 LINE L1 -773 1734 1673 2214 70 7 13 chr17 39573121 39573422 -49931131 - AluSg1 SINE Alu -10 299 1 2167 220 123 105 chr17 39573422 39573592 -49930961 - HAL1 LINE L1 -834 1673 1508 2273 101 7 0 chr17 39573592 39573899 -49930654 - AluSc SINE Alu 0 309 1 2167 220 123 105 chr17 39573899 39574285 -49930268 - HAL1 LINE L1 -999 1508 1070 467 261 127 37 chr17 39574296 39574541 -49930012 - HAL1 LINE L1 -1596 911 645 306 276 123 0 chr17 39574540 39574703 -49929850 + L1ME LINE L1 1380 1562 -5072 * 1927 127 82 111 chr17 39574741 39575181 -49929372 - Tigger2a DNA MER2_type -7 427 1 1085 250 77 33 chr17 39575187 39575374 -49929179 + L1ME LINE L1 1526 1703 -5122 1784 141 87 4 chr17 39575374 39575650 -49928903 + AluSq SINE Alu 1 299 -14 1085 250 77 33 chr17 39575650 39576054 -49928499 + L1ME LINE L1 1703 2318 -4507 456 193 83 7 chr17 39576061 39576206 -49928347 + L1ME LINE L1 2546 2701 -4124 645 265 121 0 chr17 39576212 39576461 -49928092 + L1ME LINE L1 2761 3039 -3605 1000 160 47 12 chr17 39576461 39576630 -49927923 + AluJb SINE Alu 1 175 -137 625 189 14 0 chr17 39576669 39576817 -49927736 + L1ME LINE L1 3260 3409 -3235 195 42 0 0 chr17 39576837 39576861 -49927692 + (TCTA)n Simple_repeat Simple_repeat 2 25 0 336 213 149 0 chr17 39576864 39576958 -49927595 - L1MEc LINE L1 -4154 2242 2135 441 228 32 14 chr17 39577022 39577147 -49927406 + L1MC4 LINE L1 6603 6703 -1339 1815 109 33 88 chr17 39577248 39577578 -49926975 - AluSx SINE Alu 0 312 1 2101 119 10 3 chr17 39577664 39577959 -49926594 - AluSq SINE Alu -15 298 2 601 207 26 0 chr17 39577960 39578076 -49926477 - MLT1A2 LTR MaLR -255 119 1 1404 235 115 22 chr17 39578076 39578210 -49926343 + L1ME LINE L1 3565 3685 -2959 2260 106 10 0 chr17 39578210 39578512 -49926041 + AluSx SINE Alu 3 307 -5 1404 235 115 22 chr17 39578512 39578874 -49925679 + L1ME LINE L1 3685 4107 -2537 359 212 13 99 chr17 39578890 39579041 -49925512 + L1ME LINE L1 4731 4868 -1776 232 323 109 35 chr17 39579081 39579100 -49925453 + MIR SINE MIR 18 34 -228 2092 128 10 3 chr17 39579100 39579389 -49925164 + AluSg SINE Alu 1 291 -19 232 323 109 35 chr17 39579389 39579570 -49924983 + MIR SINE MIR 34 233 -29 201 261 162 21 chr17 39580323 39580465 -49924088 - L3b LINE CR1 -130 1453 1292 286 266 145 12 chr17 39582675 39582842 -49921711 - MIR SINE MIR -56 206 18 2155 137 7 0 chr17 39583352 39583529 -49921024 - AluSq SINE Alu -5 308 127 405 0 0 0 chr17 39583529 39583574 -49920979 + (TG)n Simple_repeat Simple_repeat 2 46 0 2155 137 7 0 chr17 39583574 39583702 -49920851 - AluSq SINE Alu -186 127 1 290 308 37 0 chr17 39584076 39584183 -49920370 + MIR SINE MIR 118 228 -34 295 307 43 37 chr17 39584545 39584708 -49919845 - MIR SINE MIR -71 191 28 1742 182 35 0 chr17 39587045 39587331 -49917222 + AluJo SINE Alu 6 301 -11 357 65 65 0 chr17 39588077 39588139 -49916414 - L1MA7 LINE L1 0 6291 6226 388 325 83 0 chr17 39589364 39589521 -49915032 - L2 LINE L2 -13 3300 3131 335 321 145 0 chr17 39590628 39590759 -49913794 + MER91A DNA MER1_type 1 150 -46 2431 107 0 10 chr17 39590830 39591140 -49913413 - AluSx SINE Alu -5 307 1 222 315 103 12 chr17 39591405 39591570 -49912983 + L3 LINE CR1 1385 1564 -13 316 338 104 9 chr17 39592018 39592249 -49912304 - L2 LINE L2 -1415 1899 1647 434 333 163 12 chr17 39592693 39593203 -49911350 - L2 LINE L2 -2 3270 2686 31 26 0 0 chr17 39593997 39594035 -49910518 + AT_rich Low_complexity Low_complexity 1 38 0 243 256 149 36 chr17 39595315 39595483 -49909070 + L1ME LINE L1 5653 5839 -282 2034 162 3 0 chr17 39595610 39595913 -49908640 + AluSx SINE Alu 1 304 -8 1065 107 53 91 chr17 39595916 39596103 -49908450 + AluJb SINE Alu 132 311 -1 470 256 44 19 chr17 39596728 39596888 -49907665 + MIR SINE MIR 30 193 -69 356 231 44 0 chr17 39596896 39596987 -49907566 + L1MB7 LINE L1 6085 6179 -5 316 148 98 0 chr17 39597771 39597832 -49906721 - MER5A DNA MER1_type -119 70 4 2258 112 0 0 chr17 39597879 39598174 -49906379 + AluSx SINE Alu 1 295 -17 1806 101 122 35 chr17 39598429 39598716 -49905837 - AluSx SINE Alu 0 312 1 319 311 107 33 chr17 39598819 39599003 -49905550 + MIR SINE MIR 6 198 -63 725 179 0 0 chr17 39600639 39600762 -49903791 + FLAM_C SINE Alu 1 123 -20 256 347 63 42 chr17 39601438 39601628 -49902925 - L2 LINE L2 -181 3091 2898 1713 158 8 4 chr17 39603317 39603582 -49900971 + AluJo SINE Alu 1 266 -46 376 324 63 39 chr17 39603724 39603931 -49900622 - MIR SINE MIR -28 234 23 1607 179 90 0 chr17 39604157 39604436 -49900117 + AluJo SINE Alu 1 304 -8 513 176 0 11 chr17 39604441 39604532 -49900021 + 5S rRNA rRNA 1 90 -31 1752 175 29 29 chr17 39604639 39604947 -49899606 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr17 39604980 39605001 -49899552 + AT_rich Low_complexity Low_complexity 1 21 0 5291 148 42 15 chr17 39605048 39605844 -49898709 + L1MA5 LINE L1 4518 5291 -1009 2205 108 30 0 chr17 39605844 39606139 -49898414 + AluSq SINE Alu 1 304 -9 5291 148 42 15 chr17 39606139 39607074 -49897479 + L1MA5 LINE L1 5291 6299 -1 2278 119 0 0 chr17 39607192 39607502 -49897051 - AluSx SINE Alu -2 310 1 2007 105 35 0 chr17 39607652 39607938 -49896615 - AluJb SINE Alu -12 300 5 2429 70 10 0 chr17 39607952 39608252 -49896301 - AluSx SINE Alu -9 303 1 228 200 33 0 chr17 39608872 39608932 -49895621 + (CCCG)n Simple_repeat Simple_repeat 3 64 0 549 158 53 0 chr17 39609754 39609868 -49894685 - MER96 DNA MER1_type? -50 125 6 278 295 98 16 chr17 39610211 39610333 -49894220 + MIR SINE MIR 51 182 -80 1001 166 0 25 chr17 39610801 39610964 -49893589 + FRAM SINE Alu 1 158 -18 2128 141 0 3 chr17 39610968 39611272 -49893281 + AluSx SINE Alu 1 303 -9 1899 164 0 10 chr17 39611296 39611607 -49892946 + AluJb SINE Alu 3 310 -2 2430 61 3 3 chr17 39611836 39612129 -49892424 + AluSc SINE Alu 1 293 -16 871 250 151 60 chr17 39613869 39614074 -49890479 + L1ME1 LINE L1 1619 1804 -4592 2504 87 0 3 chr17 39614074 39614386 -49890167 - AluSx SINE Alu -1 311 1 871 250 151 60 chr17 39614386 39614767 -49889786 + L1ME1 LINE L1 1804 2270 -4126 2274 115 3 0 chr17 39614767 39615072 -49889481 + AluSx SINE Alu 2 307 -5 871 250 151 60 chr17 39615072 39615121 -49889432 + L1ME1 LINE L1 2270 2313 -4083 1046 121 7 0 chr17 39615122 39615263 -49889290 - AluSq/x SINE Alu -171 142 1 1074 213 55 82 chr17 39615263 39615551 -49889002 + L1ME1 LINE L1 2667 2942 -3273 627 209 0 8 chr17 39615551 39615680 -49888873 + FLAM_A SINE Alu 1 128 -5 1074 213 55 82 chr17 39615680 39615791 -49888762 + L1ME1 LINE L1 2942 3055 -3160 978 191 59 15 chr17 39615817 39616021 -49888532 + MER20 DNA MER1_type 1 213 -6 495 201 137 5 chr17 39616028 39616232 -49888321 + L1ME1 LINE L1 3100 3330 -2885 909 231 22 15 chr17 39616243 39616396 -49888157 + L1ME1 LINE L1 4574 4731 -1484 2108 124 3 3 chr17 39616396 39616695 -49887858 + AluSg SINE Alu 4 302 -8 909 231 22 15 chr17 39616695 39616809 -49887744 + L1ME1 LINE L1 4731 4843 -1372 2058 140 7 0 chr17 39616864 39617164 -49887389 + AluSx SINE Alu 1 302 -10 420 202 53 0 chr17 39617164 39617258 -49887295 - FLAM_A SINE Alu -27 115 17 407 237 88 0 chr17 39617258 39617372 -49887181 + L1ME1 LINE L1 4833 4956 -1259 954 163 0 67 chr17 39617377 39617555 -49886998 + AluJo SINE Alu 115 280 -32 2934 206 41 42 chr17 39617580 39618465 -49886088 + L1ME1 LINE L1 5041 6015 -220 2463 88 0 0 chr17 39618465 39618761 -49885792 + AluSc SINE Alu 1 296 -13 2934 206 41 42 chr17 39618761 39618878 -49885675 + L1ME1 LINE L1 6015 6131 -104 1882 215 73 104 chr17 39619377 39620207 -49884346 + LTR1B LTR ERV1 1 972 -48 481 263 68 38 chr17 39620244 39620378 -49884175 + LTR28 LTR ERV1 688 1019 -1 14844 202 58 52 chr17 39620513 39621449 -49883104 + HUERS-P2 LTR ERV1 75 1004 -5960 2189 115 3 0 chr17 39621449 39621744 -49882809 - AluSg SINE Alu -14 296 1 14844 202 58 52 chr17 39621744 39624638 -49879915 + HUERS-P2 LTR ERV1 1004 4055 -2909 5446 108 16 16 chr17 39624637 39625431 -49879122 + LTR1B-int LTR ERV1 5808 6601 -490 * 2127 155 11 3 chr17 39625429 39625783 -49878770 + LTR1B-int LTR ERV1 6734 7090 -1 * 1786 198 75 128 chr17 39625785 39626572 -49877981 + LTR1B LTR ERV1 1 745 -81 444 284 67 37 chr17 39626626 39626760 -49877793 + LTR28 LTR ERV1 688 1019 -1 227 219 110 0 chr17 39626826 39626899 -49877654 + MIR SINE MIR 12 92 -170 1467 164 25 25 chr17 39627172 39627490 -49877063 - AluJo SINE Alu 0 318 1 1950 133 0 31 chr17 39628632 39628949 -49875604 + AluJb SINE Alu 6 312 0 1617 164 70 3 chr17 39629221 39629507 -49875046 - AluSx SINE Alu -7 305 1 459 157 0 0 chr17 39629676 39629765 -49874788 + CT-rich Low_complexity Low_complexity 2 90 0 2020 123 0 3 chr17 39632637 39633106 -49871447 - AluSx SINE Alu 0 312 1 253 344 0 0 chr17 39634303 39634367 -49870186 + HAL1 LINE L1 792 855 -1652 2047 123 13 0 chr17 39634376 39634678 -49869875 + AluSx SINE Alu 1 306 -6 1121 293 79 51 chr17 39634691 39634744 -49869809 + HAL1 LINE L1 1032 1082 -1425 609 164 136 0 chr17 39634744 39634854 -49869699 + FLAM_C SINE Alu 2 126 -7 1121 293 79 51 chr17 39634854 39635644 -49868909 + HAL1 LINE L1 1082 1899 -608 1308 94 0 6 chr17 39636439 39636620 -49867933 - AluSg SINE Alu -130 180 1 355 267 78 0 chr17 39636998 39637088 -49867465 + MER117 DNA MER1_type 4 100 -97 244 336 128 22 chr17 39637090 39637364 -49867189 - L2 LINE L2 -1221 2093 1791 251 367 122 35 chr17 39637552 39637980 -49866573 - L2 LINE L2 -1906 1408 944 627 198 25 0 chr17 39638629 39638750 -49865803 + MLT1C LTR MaLR 344 467 0 3006 139 15 8 chr17 39638944 39639425 -49865128 + MER1A DNA MER1_type 46 529 0 282 56 0 0 chr17 39639623 39639659 -49864894 + (CA)n Simple_repeat Simple_repeat 2 37 0 272 231 20 7 chr17 39640174 39640321 -49864232 + CT-rich Low_complexity Low_complexity 2 150 0 258 116 0 0 chr17 39640647 39640690 -49863863 + (TGGGGG)n Simple_repeat Simple_repeat 4 46 0 1481 165 109 26 chr17 39641495 39641835 -49862718 + THE1C LTR MaLR 7 374 -1 243 61 0 0 chr17 39641940 39641973 -49862580 + (CCCCAG)n Simple_repeat Simple_repeat 3 35 0 1963 188 12 3 chr17 39642292 39642633 -49861920 + MER2 DNA MER2_type 1 344 0 246 313 82 61 chr17 39643668 39643815 -49860738 - MIR SINE MIR -19 243 94 182 272 48 96 chr17 39643795 39643920 -49860633 + MIR SINE MIR 18 136 -72 * 1059 317 37 12 chr17 39648531 39649209 -49855344 + L1MC4 LINE L1 5479 6164 -1621 543 241 29 105 chr17 39654307 39654449 -49850104 - L1MD3 LINE L1 0 7995 7889 1630 164 0 27 chr17 39654449 39654748 -49849805 + AluJo SINE Alu 1 291 -21 543 241 29 105 chr17 39654748 39654920 -49849633 - L1MD3 LINE L1 -106 7889 7705 356 287 0 41 chr17 39655808 39655930 -49848623 - L2 LINE L2 -740 2574 2458 309 276 24 16 chr17 39656348 39656475 -49848078 + MER113 DNA MER1_type? 14 141 -380 1770 166 3 7 chr17 39658615 39658922 -49845631 - AluJo SINE Alu -6 306 1 403 286 41 14 chr17 39659846 39659993 -49844560 + MIR SINE MIR 47 197 -65 556 217 17 0 chr17 39660016 39660136 -49844417 + MER20 DNA MER1_type 98 219 0 452 310 14 7 chr17 39660146 39660291 -49844262 + MIR SINE MIR 20 165 -97 2745 19 0 0 chr17 39660291 39660604 -49843949 + AluYb8 SINE Alu 1 313 -5 292 242 0 0 chr17 39660614 39660680 -49843873 + L1MD2 LINE L1 4820 4885 -1261 312 49 39 0 chr17 39660680 39660737 -49843816 + MER41A LTR ERV1 418 478 -76 3950 166 57 25 chr17 39660741 39661935 -49842618 + L1MA9 LINE L1 4873 6114 -198 561 277 73 56 chr17 39661536 39662021 -49842532 + L1MD2 LINE L1 5695 6312 0 * 312 279 91 91 chr17 39662322 39662468 -49842085 + L1ME4a LINE L1 5572 5717 -404 1063 214 41 23 chr17 39662468 39662688 -49841865 + MER58A DNA MER1_type 1 224 0 312 279 91 91 chr17 39662688 39663090 -49841463 + L1ME4a LINE L1 5716 6120 -1 687 254 94 9 chr17 39663953 39664177 -49840376 + MIR SINE MIR 9 251 -11 310 289 104 39 chr17 39664249 39664606 -49839947 + L1ME4a LINE L1 5575 5954 -167 406 322 94 0 chr17 39664663 39664843 -49839710 + MIR SINE MIR 63 259 -3 1744 124 0 29 chr17 39664964 39665238 -49839315 - AluSx SINE Alu -17 295 30 187 278 42 0 chr17 39665448 39665520 -49839033 - MIR SINE MIR -56 206 132 26 0 0 0 chr17 39666281 39666307 -49838246 + AT_rich Low_complexity Low_complexity 1 26 0 227 267 122 76 chr17 39666605 39666736 -49837817 - MIR SINE MIR -82 180 44 203 350 17 0 chr17 39666739 39666799 -49837754 - MIR SINE MIR -185 77 17 2395 78 0 0 chr17 39666951 39667258 -49837295 - AluY SINE Alu -4 307 1 1717 166 3 0 chr17 39667260 39667543 -49837010 - AluSx SINE Alu -17 295 12 318 258 22 0 chr17 39668001 39668090 -49836463 - L1MC4 LINE L1 -141 7901 7811 1991 117 0 0 chr17 39668090 39668372 -49836181 - AluSx SINE Alu -15 297 16 404 246 97 26 chr17 39668386 39668581 -49835972 - L1MC4a LINE L1 -566 7242 7034 2053 125 0 16 chr17 39668584 39668895 -49835658 - AluSc SINE Alu -3 306 1 2088 131 0 10 chr17 39668905 39669210 -49835343 - AluSg SINE Alu -8 302 1 549 177 21 0 chr17 39669211 39669307 -49835246 - AluJb SINE Alu -12 300 203 1339 132 0 10 chr17 39669309 39669513 -49835040 - AluSq SINE Alu -79 234 33 2150 117 0 0 chr17 39669555 39669863 -49834690 - AluSg1 SINE Alu -1 308 1 2917 137 15 28 chr17 39670014 39670487 -49834066 - MLT1C LTR MaLR 0 467 1 918 198 86 0 chr17 39670779 39670976 -49833577 - AluJb SINE Alu -7 305 92 202 234 0 0 chr17 39670983 39671030 -49833523 + T-rich Low_complexity Low_complexity 1 47 0 565 243 43 16 chr17 39671077 39671262 -49833291 - L1MC5 LINE L1 -461 7500 7311 627 205 139 12 chr17 39671375 39671541 -49833012 + MER20 DNA MER1_type 33 219 0 848 174 61 88 chr17 39671556 39671850 -49832703 - L1MC5 LINE L1 -770 7191 6906 1540 199 6 10 chr17 39671851 39672163 -49832390 - AluJb SINE Alu 0 312 2 381 244 64 45 chr17 39672221 39672377 -49832176 - L1MC4 LINE L1 -1073 6969 6811 2116 114 0 3 chr17 39672857 39673163 -49831390 - AluSg SINE Alu -5 305 1 1361 175 77 25 chr17 39673918 39674204 -49830349 - AluJb SINE Alu -11 301 1 2329 84 0 0 chr17 39674236 39674532 -49830021 - AluSc SINE Alu -13 296 1 2205 135 0 3 chr17 40076699 40077011 -49427542 + AluJb SINE Alu 1 311 -1 303 287 191 0 chr17 40079749 40079864 -49424689 - L2 LINE L2 0 3313 3177 390 286 43 81 chr17 40079876 40079945 -49424608 - MIR SINE MIR -14 248 178 2457 71 3 3 chr17 40079945 40080255 -49424298 - AluY SINE Alu -1 310 1 390 286 43 81 chr17 40080255 40080395 -49424158 - MIR SINE MIR -84 178 47 345 331 53 0 chr17 40080450 40080583 -49423970 - L2 LINE L2 -210 3062 2923 386 252 205 7 chr17 40080891 40081042 -49423511 - MER5A DNA MER1_type 0 189 9 213 300 12 38 chr17 40084645 40084725 -49419828 - MIR3 SINE MIR -25 183 106 438 100 0 0 chr17 40084809 40084869 -49419684 + FRAM/FAM SINE Alu 9 68 -108 245 247 71 12 chr17 40084901 40084986 -49419567 + MIR3 SINE MIR 116 205 -3 2224 106 10 7 chr17 40085197 40085499 -49419054 - AluSx SINE Alu -9 303 1 202 279 0 33 chr17 40086660 40086721 -49417832 - MIR SINE MIR -69 139 81 363 221 0 13 chr17 40086737 40086814 -49417739 + AluJo SINE Alu 1 76 -226 439 95 0 0 chr17 40086814 40086877 -49417676 - AluJo SINE Alu -15 297 235 943 148 49 7 chr17 40086877 40087019 -49417534 - AluJo SINE Alu -152 160 13 1290 150 52 5 chr17 40087025 40087218 -49417335 + AluJo SINE Alu 76 277 -35 2409 92 0 7 chr17 40087650 40087953 -49416600 + AluSc SINE Alu 1 301 -8 192 299 38 45 chr17 40087975 40088132 -49416421 - L2 LINE L2 -286 2986 2831 2323 91 3 7 chr17 40088313 40088609 -49415944 + AluSp SINE Alu 1 295 -18 1298 106 0 11 chr17 40088625 40088804 -49415749 + AluSq SINE Alu 120 296 -17 285 195 49 49 chr17 40088981 40089063 -49415490 + L2 LINE L2 3183 3264 -49 2319 77 13 16 chr17 40089316 40089626 -49414927 + AluSx SINE Alu 1 309 -3 223 312 83 0 chr17 40089628 40089737 -49414816 - L2 LINE L2 -15 3257 3140 184 244 0 22 chr17 40089822 40089867 -49414686 - L2 LINE L2 -90 3223 3180 680 246 56 32 chr17 40090532 40090784 -49413769 - MIR SINE MIR -3 259 2 1392 136 0 68 chr17 40090805 40090979 -49413574 - AluJo SINE Alu -7 305 150 2932 10 0 0 chr17 40090979 40091290 -49413263 - AluY SINE Alu 0 311 1 1392 136 0 68 chr17 40091290 40091350 -49413203 - AluJo SINE Alu -162 150 87 207 0 0 0 chr17 40091350 40091373 -49413180 + (T)n Simple_repeat Simple_repeat 1 23 0 1584 149 0 13 chr17 40091387 40091615 -49412938 - AluJo SINE Alu -85 227 3 261 253 101 0 chr17 40092823 40092902 -49411651 + MIR SINE MIR 44 130 -78 1708 161 30 16 chr17 40092909 40093214 -49411339 - AluJb SINE Alu -3 309 1 257 240 19 39 chr17 40094592 40094696 -49409857 + CT-rich Low_complexity Low_complexity 1 102 0 * 288 333 6 13 chr17 40094655 40094811 -49409742 + C-rich Low_complexity Low_complexity 1 155 0 399 41 0 0 chr17 40095930 40095979 -49408574 + (TG)n Simple_repeat Simple_repeat 1 49 0 66 73 0 0 chr17 40096283 40096419 -49408134 + GC_rich Low_complexity Low_complexity 1 136 0 24 32 0 0 chr17 40096461 40096492 -49408061 + GC_rich Low_complexity Low_complexity 1 31 0 30 77 0 0 chr17 40096626 40096691 -49407862 + GC_rich Low_complexity Low_complexity 1 65 0 253 253 13 0 chr17 40097480 40097559 -49406994 + G-rich Low_complexity Low_complexity 5 84 0 288 232 40 40 chr17 40097833 40097984 -49406569 + (CAGAGA)n Simple_repeat Simple_repeat 6 156 0 1851 160 6 13 chr17 40098453 40098766 -49405787 - AluSx SINE Alu -1 311 1 2224 89 6 38 chr17 40099376 40099692 -49404861 - AluSq SINE Alu -7 306 1 599 258 165 0 chr17 40101069 40101251 -49403302 - MIR SINE MIR -35 227 16 184 239 42 148 chr17 40101804 40101946 -49402607 + MIR SINE MIR 18 144 -64 2332 108 0 9 chr17 40102294 40102609 -49401944 + AluSx SINE Alu 1 312 0 1188 140 0 0 chr17 40102609 40102773 -49401780 + AluSg/x SINE Alu 132 295 -15 182 319 0 0 chr17 40102773 40102820 -49401733 - L2 LINE L2 -21 3292 3246 586 229 151 21 chr17 40103645 40103837 -49400716 - MIR SINE MIR -6 256 40 21 57 0 0 chr17 40106208 40106243 -49398310 + GC_rich Low_complexity Low_complexity 1 35 0 1562 207 0 11 chr17 40106648 40106933 -49397620 - AluJb SINE Alu -30 282 1 1674 154 46 39 chr17 40106933 40107218 -49397335 - AluJo SINE Alu -15 297 11 183 42 0 0 chr17 40107603 40107627 -49396926 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 420 335 95 6 chr17 40108040 40108219 -49396334 + MIR SINE MIR 29 223 -39 1435 251 30 77 chr17 40108723 40109356 -49395197 - L1ME1 LINE L1 -310 5856 5254 722 198 0 0 chr17 40109390 40109516 -49395037 + FLAM_C SINE Alu 2 127 -16 5152 258 43 14 chr17 40109530 40111208 -49393345 - L1ME1 LINE L1 -913 5233 3508 348 309 8 40 chr17 40112969 40113095 -49391458 + MIR3 SINE MIR 72 193 -15 2262 121 0 7 chr17 40113132 40113438 -49391115 + AluSg SINE Alu 1 304 -6 4590 87 2 2 chr17 40115935 40116569 -49387984 - THE1B-int LTR MaLR -946 634 1 1756 144 18 85 chr17 40116569 40116611 -49387942 - THE1B LTR MaLR 0 364 321 207 0 0 0 chr17 40116611 40116634 -49387919 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1756 144 18 85 chr17 40116634 40116981 -49387572 - THE1B LTR MaLR -43 321 1 254 286 0 26 chr17 40117396 40117473 -49387080 - MIR3 SINE MIR -34 174 100 219 186 0 0 chr17 40118849 40118892 -49385661 - L2 LINE L2 -4 3309 3267 464 179 0 0 chr17 40119038 40119116 -49385437 - AluJ/FLAM SINE Alu -233 79 2 2256 133 10 0 chr17 40119167 40119476 -49385077 - AluSx SINE Alu 0 312 1 240 35 0 0 chr17 40119494 40119523 -49385030 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1678 197 7 0 chr17 40119525 40119804 -49384749 - AluJb SINE Alu -31 281 1 1333 161 45 98 chr17 40119810 40120172 -49384381 - L1MB7 LINE L1 -11 6173 5830 2143 207 6 28 chr17 40120172 40120669 -49383884 - MER66B LTR ERV1 0 486 1 1333 161 45 98 chr17 40120669 40120684 -49383869 - L1MB7 LINE L1 -354 5830 5816 1839 149 0 64 chr17 40120684 40121013 -49383540 - AluSx SINE Alu 0 312 5 263 202 90 11 chr17 40121366 40121455 -49383098 - MLT1J2 LTR MaLR 0 450 355 405 248 52 60 chr17 40121460 40121669 -49382884 - MLT1I LTR MaLR -140 310 71 275 312 21 0 chr17 40121713 40121806 -49382747 - MIR3 SINE MIR -110 98 4 212 319 55 11 chr17 40125356 40125447 -49379106 - L2 LINE L2 -10 3262 3168 1364 279 53 55 chr17 40126617 40126686 -49377867 - L2 LINE L2 -1 3312 3244 2192 142 0 3 chr17 40126686 40126995 -49377558 - AluSx SINE Alu -4 308 1 1364 279 53 55 chr17 40126995 40127686 -49376867 - L2 LINE L2 -69 3244 2553 206 261 0 0 chr17 40128422 40128468 -49376085 + MIR SINE MIR 161 206 -56 237 310 62 39 chr17 40128590 40128719 -49375834 - L2 LINE L2 -4 3268 3137 1746 103 0 11 chr17 40129135 40129432 -49375121 - AluY SINE Alu 0 317 24 1330 221 84 22 chr17 40129490 40129847 -49374706 - MLT1B LTR MaLR -11 379 1 265 336 69 23 chr17 40129913 40130044 -49374509 + L2 LINE L2 2956 3092 -180 2032 117 14 0 chr17 40130275 40130565 -49373988 - AluSx SINE Alu -18 294 1 209 250 0 0 chr17 40131292 40131340 -49373213 + C-rich Low_complexity Low_complexity 1 48 0 1696 113 0 79 chr17 40132530 40132822 -49371731 + AluSx SINE Alu 29 297 -15 268 288 14 0 chr17 40132823 40132896 -49371657 + MIR SINE MIR 152 225 -37 1596 108 127 19 chr17 40133307 40133575 -49370978 + AluSg1 SINE Alu 1 297 -12 1769 111 0 37 chr17 40133590 40133888 -49370665 + AluSx SINE Alu 7 293 -19 974 85 0 8 chr17 40133888 40134018 -49370535 - Tigger1 DNA MER2_type -960 1458 1330 281 193 88 0 chr17 40134021 40134078 -49370475 - AluSp SINE Alu -111 192 131 753 235 0 19 chr17 40134084 40134246 -49370307 - FRAM SINE Alu -3 163 5 2517 37 0 0 chr17 40134872 40135169 -49369384 + AluY SINE Alu 1 297 -14 1277 195 26 15 chr17 40135178 40135450 -49369103 - AluJb SINE Alu -33 279 5 3420 102 14 10 chr17 40135982 40136484 -49368069 - L1P LINE L1 -1131 5015 4512 4566 75 7 8 chr17 40136484 40137090 -49367463 + L1PA7 LINE L1 5544 6154 0 295 286 54 71 chr17 40137091 40137259 -49367294 - L2 LINE L2 -26 3287 3123 448 293 50 91 chr17 40137279 40137720 -49366833 + L2 LINE L2 2868 3290 -23 204 67 0 0 chr17 40137773 40137803 -49366750 + (TG)n Simple_repeat Simple_repeat 1 30 0 426 350 164 15 chr17 40137966 40138375 -49366178 + L2 LINE L2 2265 2734 -580 283 293 78 66 chr17 40138423 40138590 -49365963 + L2 LINE L2 2877 3045 -227 639 235 63 99 chr17 40138788 40139009 -49365544 - MIR SINE MIR -2 260 48 1988 142 0 3 chr17 40139440 40139750 -49364803 + AluSx SINE Alu 1 309 -3 276 250 159 0 chr17 40140253 40140341 -49364212 + L2 LINE L2 3208 3309 -4 1448 149 0 37 chr17 40141160 40141428 -49363125 + AluJo SINE Alu 1 258 -54 796 278 183 54 chr17 40141738 40142411 -49362142 + L2 LINE L2 2302 3047 -266 496 259 9 9 chr17 40143039 40143155 -49361398 - MIR SINE MIR -146 116 1 529 319 106 41 chr17 40143235 40143649 -49360904 - L3 LINE CR1 -99 1478 1038 439 215 118 0 chr17 40143863 40143956 -49360597 + MIR3 SINE MIR 54 157 -51 357 268 82 42 chr17 40144021 40144186 -49360367 - MIR SINE MIR -61 201 34 186 326 116 31 chr17 40144320 40144449 -49360104 + L3b LINE CR1 1238 1377 -206 441 168 11 21 chr17 40145520 40145615 -49358938 - L1M4 LINE L1 -960 5186 5093 445 67 17 0 chr17 40145618 40145678 -49358875 - AluJ/FLAM SINE Alu -250 62 2 1298 211 68 116 chr17 40145688 40145943 -49358610 - L1M4 LINE L1 -954 5192 4926 2274 87 7 0 chr17 40145943 40146243 -49358310 - AluY SINE Alu -9 302 1 1298 211 68 116 chr17 40146243 40146556 -49357997 - L1M4 LINE L1 -1220 4926 4651 * 4146 199 40 55 chr17 40146555 40146796 -49357757 - L1M4 LINE L1 -1889 4257 4014 1963 138 0 0 chr17 40146796 40147092 -49357461 - AluJb SINE Alu -16 296 1 4146 199 40 55 chr17 40147092 40147374 -49357179 - L1M4 LINE L1 -2132 4014 3729 1773 156 0 23 chr17 40147374 40147682 -49356871 - AluSx SINE Alu -11 301 1 4146 199 40 55 chr17 40147682 40148099 -49356454 - L1M4 LINE L1 -2417 3729 3307 216 0 0 0 chr17 40148099 40148123 -49356430 + (TG)n Simple_repeat Simple_repeat 1 24 0 1842 129 7 0 chr17 40148123 40148403 -49356150 - AluSx SINE Alu -30 282 1 4146 199 40 55 chr17 40148403 40148649 -49355904 - L1M4 LINE L1 -2837 3309 3086 1700 84 0 13 chr17 40149165 40149403 -49355150 + AluSq SINE Alu 77 311 -2 465 228 148 53 chr17 40149491 40149609 -49354944 + MIR SINE MIR 49 193 -69 1817 204 49 10 chr17 40149609 40150016 -49354537 - MSTB LTR MaLR 0 426 4 465 228 148 53 chr17 40150016 40150086 -49354467 + MIR SINE MIR 193 255 -7 351 287 55 66 chr17 40150095 40150276 -49354277 - MIR SINE MIR -56 206 28 565 191 127 25 chr17 40151541 40151698 -49352855 - MIR SINE MIR -70 192 20 180 0 0 0 chr17 40152727 40152747 -49351806 + (TG)n Simple_repeat Simple_repeat 2 21 0 2787 72 23 48 chr17 40152994 40153427 -49351126 + L1PA6 LINE L1 5733 6154 0 210 71 0 0 chr17 40153829 40153857 -49350696 + (GA)n Simple_repeat Simple_repeat 1 28 0 287 263 92 0 chr17 40154156 40154232 -49350321 + L2 LINE L2 3231 3313 0 354 243 0 14 chr17 40154234 40154304 -49350249 + L2 LINE L2 3204 3272 0 2356 55 0 19 chr17 40155159 40155470 -49349083 + AluY SINE Alu 1 305 -6 24 0 0 0 chr17 40157245 40157269 -49347284 + AT_rich Low_complexity Low_complexity 1 24 0 186 238 163 25 chr17 40157847 40157927 -49346626 - L2 LINE L2 -64 3249 3159 392 246 84 42 chr17 40157961 40158128 -49346425 + MER104 DNA MER2_type 4 177 -3 650 343 48 30 chr17 40158308 40158705 -49345848 - L2 LINE L2 -420 2894 2491 373 324 35 24 chr17 40161510 40161724 -49342829 + MIR SINE MIR 8 262 0 893 227 88 5 chr17 40161873 40162067 -49342486 - MIR SINE MIR -46 216 7 187 302 170 19 chr17 40162102 40162208 -49342345 - L2 LINE L2 -3 3310 3189 315 0 0 0 chr17 40167838 40167871 -49336682 + (CA)n Simple_repeat Simple_repeat 1 68 0 315 0 0 0 chr17 40167871 40167906 -49336647 + (CA)n Simple_repeat Simple_repeat 2 36 0 192 344 104 10 chr17 40169177 40169273 -49335280 - MIR3 SINE MIR -89 119 15 462 106 0 0 chr17 40169493 40169559 -49334994 - L1MB5 LINE L1 -6 6168 6103 279 0 0 0 chr17 40170811 40170842 -49333711 + (TG)n Simple_repeat Simple_repeat 1 31 0 26 50 0 0 chr17 40171055 40171095 -49333458 + GC_rich Low_complexity Low_complexity 1 40 0 182 105 26 0 chr17 40171169 40171207 -49333346 + (CCCCG)n Simple_repeat Simple_repeat 1 39 0 958 146 29 6 chr17 40173403 40173574 -49330979 - AluJb SINE Alu -51 261 87 553 324 48 9 chr17 40173740 40173950 -49330603 + MIR SINE MIR 35 252 -10 2237 91 0 3 chr17 40173957 40174264 -49330289 + AluSx SINE Alu 1 306 -6 927 161 6 52 chr17 40175764 40175938 -49328615 + FRAM SINE Alu 1 166 0 1962 106 14 3 chr17 40175968 40176254 -49328299 + AluSx SINE Alu 1 316 0 190 74 0 0 chr17 40176254 40176281 -49328272 + (TAA)n Simple_repeat Simple_repeat 2 180 0 180 0 0 0 chr17 40176288 40176308 -49328245 + (GA)n Simple_repeat Simple_repeat 1 20 0 1292 172 5 0 chr17 40176317 40176515 -49328038 - AluJb SINE Alu -27 285 87 416 239 238 1 chr17 40176522 40176711 -49327842 - MIR SINE MIR -11 251 20 871 168 0 14 chr17 40177299 40177442 -49327111 - AluJb SINE Alu -16 296 156 293 0 0 0 chr17 40177500 40177536 -49327017 + AluY SINE Alu 1 36 -266 282 264 94 71 chr17 40177728 40177940 -49326613 + L3 LINE CR1 1102 1318 -259 193 262 33 74 chr17 40178043 40178165 -49326388 + L2 LINE L2 2862 2978 -335 327 291 39 19 chr17 40178200 40178303 -49326250 + L3 LINE CR1 1323 1427 -150 508 331 73 25 chr17 40178359 40178715 -49325838 - L2 LINE L2 -62 3251 2879 1329 196 13 27 chr17 40178911 40179212 -49325341 - AluSq SINE Alu -12 301 5 2140 119 10 16 chr17 40179480 40179792 -49324761 + AluSg SINE Alu 1 310 0 21 0 0 0 chr17 40182171 40182192 -49322361 + AT_rich Low_complexity Low_complexity 1 21 0 2165 105 7 10 chr17 40183145 40183439 -49321114 + AluSg SINE Alu 3 295 -15 222 171 0 0 chr17 40184284 40184325 -49320228 + (TG)n Simple_repeat Simple_repeat 2 42 0 213 121 0 0 chr17 40184668 40184701 -49319852 + (A)n Simple_repeat Simple_repeat 1 33 0 216 369 43 7 chr17 40186611 40186752 -49317801 - L3b LINE CR1 -140 1443 1298 3453 130 46 28 chr17 40186789 40187101 -49317452 - Tigger1 DNA MER2_type -2 2416 2111 2564 60 0 3 chr17 40187101 40187402 -49317151 - AluY SINE Alu -11 300 1 3453 130 46 28 chr17 40187402 40187697 -49316856 - Tigger1 DNA MER2_type -307 2111 1798 681 172 0 39 chr17 40187700 40187828 -49316725 + FLAM_A SINE Alu 3 125 -17 1512 99 12 129 chr17 40187828 40188078 -49316475 - Tigger1 DNA MER2_type -613 1805 1602 2178 111 0 3 chr17 40188078 40188366 -49316187 - AluSx SINE Alu -19 293 7 1512 99 12 129 chr17 40188366 40188448 -49316105 - Tigger1 DNA MER2_type -816 1602 1512 180 0 0 0 chr17 40188490 40188510 -49316043 + (T)n Simple_repeat Simple_repeat 1 20 0 920 179 17 12 chr17 40188619 40188792 -49315761 - THE1B LTR MaLR -190 174 1 3730 123 2 5 chr17 40188792 40189351 -49315202 - THE1B-int LTR MaLR 0 1580 1024 213 211 42 0 chr17 40189511 40189582 -49314971 + (TA)n Simple_repeat Simple_repeat 1 74 0 211 187 0 107 chr17 40189655 40189730 -49314823 + T-rich Low_complexity Low_complexity 1 67 0 183 42 0 0 chr17 40191209 40191233 -49313320 + (A)n Simple_repeat Simple_repeat 1 24 0 192 135 0 0 chr17 40191863 40191900 -49312653 + (GGGGA)n Simple_repeat Simple_repeat 1 37 0 337 226 113 17 chr17 40192412 40192527 -49312026 + MER5A DNA MER1_type 64 189 0 852 249 23 34 chr17 40192961 40193226 -49311327 + AluJo SINE Alu 5 266 -46 2020 126 10 0 chr17 40193236 40193623 -49310930 - AluSp SINE Alu 0 390 1 521 208 179 48 chr17 40194792 40194999 -49309554 + MLT1L LTR MaLR 41 274 -341 2042 116 0 20 chr17 40195028 40195331 -49309222 + AluSx SINE Alu 14 310 -2 1689 161 34 7 chr17 40195342 40195633 -49308920 + AluJb SINE Alu 1 299 -13 2442 83 0 3 chr17 40195633 40195945 -49308608 + AluY SINE Alu 1 311 0 2111 120 0 7 chr17 40195945 40196263 -49308290 + AluSg SINE Alu 1 316 0 2424 87 7 3 chr17 40196266 40196575 -49307978 + AluSg SINE Alu 1 310 0 600 247 47 26 chr17 40196583 40196773 -49307780 + MLT1L LTR MaLR 422 615 0 380 243 59 55 chr17 40196899 40197048 -49307505 + MIR SINE MIR 1 151 -68 478 138 23 23 chr17 40197230 40197317 -49307236 - L2 LINE L2 -2 3311 3225 278 140 0 35 chr17 40197410 40197467 -49307086 - FLAM SINE Alu -22 111 57 2270 88 41 3 chr17 40197891 40198186 -49306367 + AluSx SINE Alu 1 306 -6 195 155 119 107 chr17 40198642 40198726 -49305827 - MIR SINE MIR -108 154 70 315 0 0 0 chr17 40198886 40198921 -49305632 + (TG)n Simple_repeat Simple_repeat 1 35 0 2137 113 0 3 chr17 40199105 40199424 -49305129 + AluSg SINE Alu 1 318 0 324 308 231 18 chr17 40199876 40200318 -49304235 + L2 LINE L2 1744 2279 -1035 416 327 77 70 chr17 40201173 40201773 -49302780 + L2 LINE L2 2670 3270 -2 180 0 0 0 chr17 40204176 40204196 -49300357 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 182 179 107 18 chr17 40204867 40204923 -49299630 + L2 LINE L2 2698 2758 -556 872 233 48 12 chr17 40205503 40205752 -49298801 - MIR SINE MIR 0 262 5 205 29 29 29 chr17 40207648 40207683 -49296870 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1498 164 29 74 chr17 40207697 40207889 -49296664 - AluJb SINE Alu -16 296 122 195 69 0 0 chr17 40207889 40207918 -49296635 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1498 164 29 74 chr17 40207918 40208035 -49296518 - AluJb SINE Alu -190 122 1 396 271 8 17 chr17 40208340 40208458 -49296095 - MIR SINE MIR -99 163 47 482 330 33 41 chr17 40208472 40208742 -49295811 - MER102b DNA MER1_type -1 340 73 185 211 0 0 chr17 40208827 40208865 -49295688 - MIR SINE MIR -224 38 1 301 308 267 0 chr17 40208894 40209089 -49295464 - L3 LINE CR1 -212 1365 1119 313 246 203 7 chr17 40210816 40210954 -49293599 + MIR SINE MIR 35 199 -63 229 266 113 24 chr17 40211252 40211376 -49293177 + MIR3 SINE MIR 53 187 -21 440 297 109 0 chr17 40214042 40214207 -49290346 - MIR3 SINE MIR -25 183 1 2928 199 47 3 chr17 40214582 40215239 -49289314 - L1 LINE L1 -847 5299 4614 288 351 50 11 chr17 40215250 40215529 -49289024 - L3 LINE CR1 -118 1459 1170 342 344 8 0 chr17 40215750 40215875 -49288678 - L3 LINE CR1 -406 1171 1046 1932 152 10 13 chr17 40215901 40216210 -49288343 - AluSx SINE Alu -4 308 1 324 294 171 11 chr17 40216218 40216405 -49288148 - MIR SINE MIR -26 236 20 460 346 81 25 chr17 40216864 40217545 -49287008 + L2 LINE L2 2554 3269 -3 256 266 43 14 chr17 40217804 40217943 -49286610 - L1ME4a LINE L1 -3 6118 5976 364 255 80 21 chr17 40217948 40218136 -49286417 - L1ME4a LINE L1 -216 5905 5707 435 301 8 8 chr17 40218820 40218943 -49285610 - MER5B DNA MER1_type -52 126 4 209 88 88 0 chr17 40219134 40219178 -49285375 + MIR SINE MIR 114 162 -100 556 106 24 0 chr17 40219835 40219920 -49284633 - AluS SINE Alu -223 89 3 2011 130 18 0 chr17 40219927 40220211 -49284342 - AluSx SINE Alu -21 291 3 180 188 0 0 chr17 40220340 40220372 -49284181 - L2 LINE L2 -19 3294 3263 322 198 198 0 chr17 40220395 40220486 -49284067 - MIR SINE MIR -63 145 37 189 326 11 22 chr17 40220478 40220567 -49283986 + L2 LINE L2 3184 3271 -1 * 281 308 33 0 chr17 40221273 40221364 -49283189 + C-rich Low_complexity Low_complexity 4 97 0 2003 126 3 10 chr17 40221867 40222160 -49282393 - AluJo SINE Alu -21 291 1 498 299 123 35 chr17 40222303 40222708 -49281845 - L2 LINE L2 -2 3270 2830 182 333 111 0 chr17 40222770 40222851 -49281702 - L2 LINE L2 -710 2604 2515 252 347 25 33 chr17 40222898 40223019 -49281534 - MIR SINE MIR -82 180 61 1710 139 4 0 chr17 40223618 40223863 -49280690 - AluSx SINE Alu -66 246 1 648 168 0 60 chr17 40223863 40224012 -49280541 - AluJo SINE Alu -171 141 2 190 143 61 41 chr17 40224012 40224061 -49280492 + MIR SINE MIR 113 162 -100 374 198 37 0 chr17 40224233 40224314 -49280239 - L2 LINE L2 -13 3259 3176 265 252 221 0 chr17 40224431 40224562 -49279991 + MIR3 SINE MIR 30 189 -19 701 226 53 21 chr17 40225155 40225345 -49279208 + MIR SINE MIR 11 206 -56 224 323 90 69 chr17 40228511 40228700 -49275853 + MIR SINE MIR 67 259 -3 723 275 171 37 chr17 40229474 40229907 -49274646 - LTR33A LTR ERVL -6 517 27 253 331 54 54 chr17 40230825 40231103 -49273450 - L2 LINE L2 -493 2821 2544 248 371 64 21 chr17 40232239 40232379 -49272174 + L2 LINE L2 3125 3270 -2 724 257 21 16 chr17 40232418 40232605 -49271948 + MIR SINE MIR 61 248 -14 516 280 90 8 chr17 40233317 40233519 -49271034 - MIR SINE MIR 0 262 50 258 136 0 0 chr17 40233610 40233654 -49270899 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 213 316 0 0 chr17 40234351 40234430 -49270123 + (TG)n Simple_repeat Simple_repeat 2 80 0 1156 130 0 6 chr17 40235154 40235331 -49269222 + AluSg/x SINE Alu 131 306 -4 401 320 46 52 chr17 40235334 40235528 -49269025 - MIR SINE MIR -45 217 25 1918 128 16 16 chr17 40235632 40235937 -49268616 - AluJb SINE Alu -7 305 1 253 324 210 5 chr17 40236916 40237135 -49267418 - L2 LINE L2 -354 2960 2697 2248 85 0 13 chr17 40237148 40237455 -49267098 + AluSg SINE Alu 1 303 -7 818 178 0 14 chr17 40237465 40237611 -49266942 + FRAM SINE Alu 11 154 -22 2528 46 0 3 chr17 40237727 40238031 -49266522 + AluY SINE Alu 1 303 -8 21 0 0 0 chr17 40239628 40239649 -49264904 + GC_rich Low_complexity Low_complexity 1 21 0 311 339 182 29 chr17 40240396 40240638 -49263915 + L2 LINE L2 2992 3270 -2 240 298 75 0 chr17 40241204 40241298 -49263255 + L3 LINE CR1 1310 1410 -167 2050 95 0 18 chr17 40241379 40241694 -49262859 - AluSx SINE Alu 0 314 5 189 297 62 0 chr17 40241721 40241785 -49262768 - L2 LINE L2 -4 3268 3201 1189 175 66 90 chr17 40241866 40242243 -49262310 + MLT1A2 LTR MaLR 1 368 -6 517 258 144 0 chr17 40242350 40242517 -49262036 + MIR SINE MIR 69 259 -3 2029 129 7 7 chr17 40242739 40243041 -49261512 - AluSx SINE Alu -10 302 1 1767 139 7 13 chr17 40243384 40243687 -49260866 + AluJo SINE Alu 5 305 -7 459 257 46 33 chr17 40244391 40244543 -49260010 + MIR SINE MIR 98 251 -11 545 314 141 32 chr17 40245065 40245366 -49259187 + L2 LINE L2 1314 1581 -1732 2007 125 0 11 chr17 40245366 40245684 -49258869 - AluJb SINE Alu 0 315 1 545 314 141 32 chr17 40245684 40246031 -49258522 + L2 LINE L2 1581 3313 0 444 219 7 44 chr17 40246054 40246116 -49258437 - L1M4 LINE L1 -2472 3674 3611 2092 112 10 10 chr17 40246116 40246421 -49258132 - AluSg SINE Alu -5 305 1 444 219 7 44 chr17 40246421 40246495 -49258058 - L1M4 LINE L1 -2535 3611 3543 50 80 0 0 chr17 40246495 40246608 -49257945 + AT_rich Low_complexity Low_complexity 1 113 0 1368 239 49 13 chr17 40246608 40246847 -49257706 - L1M4 LINE L1 -2579 3567 3338 2299 94 0 0 chr17 40246847 40247154 -49257399 + AluY SINE Alu 1 307 -4 1368 239 49 13 chr17 40247154 40247365 -49257188 - L1M4 LINE L1 -2808 3338 3101 718 256 37 21 chr17 40247384 40247575 -49256978 - MIR SINE MIR -67 195 2 304 315 0 11 chr17 40249521 40249613 -49254940 + G-rich Low_complexity Low_complexity 3 93 0 299 304 117 12 chr17 40251244 40251491 -49253062 + HAL1 LINE L1 1361 1633 -874 1913 117 3 11 chr17 40251494 40251777 -49252776 - AluSx SINE Alu -13 299 19 954 197 0 0 chr17 40251967 40252145 -49252408 - FRAM SINE Alu -3 173 1 2204 125 0 0 chr17 40252268 40252573 -49251980 + AluSq SINE Alu 1 305 -8 2061 133 0 9 chr17 40252934 40253249 -49251304 + AluSx SINE Alu 1 312 0 436 296 75 6 chr17 40253286 40253445 -49251108 + MIR SINE MIR 88 257 -5 631 175 162 32 chr17 40253874 40254028 -49250525 - AluJb SINE Alu 0 312 139 505 226 93 3 chr17 40254145 40254313 -49250240 - MIR SINE MIR -23 239 52 854 210 28 6 chr17 40254332 40254513 -49250040 + MER20 DNA MER1_type 31 215 -4 274 274 0 49 chr17 40254627 40254729 -49249824 + MIR SINE MIR 33 129 -79 1630 152 57 17 chr17 40254983 40255279 -49249274 + AluJb SINE Alu 1 308 -4 592 194 65 14 chr17 40255914 40256053 -49248500 + MIR SINE MIR 6 151 -111 441 238 20 0 chr17 40257305 40257406 -49247147 - MER91A DNA MER1_type -93 103 1 962 106 0 7 chr17 40257504 40257668 -49246885 + AluSg/x SINE Alu 152 310 0 266 269 32 43 chr17 40258207 40258300 -49246253 - MIR3 SINE MIR -32 176 85 392 370 105 24 chr17 40258890 40259309 -49245244 + L1M3 LINE L1 4617 5069 -1077 2037 132 0 22 chr17 40259392 40259711 -49244842 + AluSx SINE Alu 1 312 0 2339 102 0 0 chr17 40259724 40260037 -49244516 + AluSq SINE Alu 1 313 0 372 283 47 34 chr17 40260063 40260346 -49244207 + L1M3 LINE L1 5191 5451 -729 422 178 0 0 chr17 40260370 40260443 -49244110 + AluJ/FLAM SINE Alu 5 77 -235 2032 124 11 0 chr17 40260548 40260831 -49243722 - AluSx SINE Alu -26 286 1 756 287 73 21 chr17 40260836 40261219 -49243334 + L1MC4a LINE L1 5464 5819 -302 1183 163 39 5 chr17 40261251 40261454 -49243099 - MER63A DNA MER1_type 0 210 1 753 239 64 14 chr17 40261550 40261768 -49242785 + MIR SINE MIR 2 230 -32 180 0 0 0 chr17 40261867 40261887 -49242666 + (A)n Simple_repeat Simple_repeat 1 20 0 1742 146 7 39 chr17 40261891 40262199 -49242354 + AluJo SINE Alu 7 304 -8 759 293 55 65 chr17 40262707 40263077 -49241476 + L2 LINE L2 2914 3281 -32 979 159 53 92 chr17 40263077 40263304 -49241249 + MER20 DNA MER1_type 1 218 -1 759 293 55 65 chr17 40263304 40263336 -49241217 + L2 LINE L2 3281 3312 -1 694 242 91 25 chr17 40265186 40265384 -49239169 + MER58C DNA MER1_type 5 215 0 218 260 68 68 chr17 40265390 40265536 -49239017 + L2 LINE L2 2919 3064 -208 311 250 95 60 chr17 40266081 40266249 -49238304 + MIR3 SINE MIR 27 200 -8 930 169 25 6 chr17 40266672 40266832 -49237721 - AluJo SINE Alu -18 294 132 1211 148 33 102 chr17 40266873 40267009 -49237544 + AluSx SINE Alu 21 126 -186 2521 43 0 3 chr17 40267009 40267313 -49237240 + AluY SINE Alu 1 303 -8 1211 148 33 102 chr17 40267313 40267480 -49237073 + AluSx SINE Alu 126 303 -9 749 171 0 24 chr17 40267482 40267605 -49236948 - AluJo SINE Alu -189 123 4 1910 128 0 16 chr17 40267623 40267798 -49236755 - AluSx SINE Alu -4 308 139 2430 62 0 3 chr17 40267798 40268102 -49236451 - AluY SINE Alu -8 303 1 1910 128 0 16 chr17 40268102 40268239 -49236314 - AluSx SINE Alu -173 139 1 382 364 8 0 chr17 40268239 40268371 -49236182 + L3 LINE CR1 1370 1502 -75 366 287 31 23 chr17 40269122 40269251 -49235302 + MIR SINE MIR 16 145 -117 2170 82 14 10 chr17 40269752 40270046 -49234507 + AluSc SINE Alu 1 295 -14 213 280 151 0 chr17 40270429 40270522 -49234031 - MIR SINE MIR -87 175 69 34 42 0 0 chr17 40270761 40270809 -49233744 + GC_rich Low_complexity Low_complexity 1 48 0 443 325 107 14 chr17 40271231 40271576 -49232977 + L2 LINE L2 1735 2111 -1203 574 165 116 0 chr17 40271630 40271751 -49232802 + MER20 DNA MER1_type 85 219 0 189 0 0 0 chr17 40271787 40271808 -49232745 + (TCTCC)n Simple_repeat Simple_repeat 1 21 0 1030 317 154 12 chr17 40271808 40272782 -49231771 + L2 LINE L2 2165 3272 0 234 316 61 18 chr17 40273087 40273201 -49231352 + MIR3 SINE MIR 66 184 -24 2168 118 0 9 chr17 40274255 40274570 -49229983 + AluSq SINE Alu 1 312 -1 486 294 68 6 chr17 40275007 40275170 -49229383 - MIR SINE MIR -70 192 20 2129 86 0 54 chr17 40275227 40275542 -49229011 + AluSx SINE Alu 1 298 -14 566 293 46 13 chr17 40275572 40275766 -49228787 - MIR SINE MIR -33 229 33 379 356 114 17 chr17 40275867 40276103 -49228450 + L2 LINE L2 2540 2798 -516 2335 104 0 0 chr17 40277099 40277406 -49227147 + AluSx SINE Alu 1 307 -5 441 206 0 3 chr17 40277435 40277517 -49227036 + AluJ/FLAM SINE Alu 3 68 -244 2155 94 0 10 chr17 40277517 40277814 -49226739 + AluSx SINE Alu 1 294 -18 188 284 0 75 chr17 40277974 40278041 -49226512 - L2 LINE L2 -72 3241 3180 215 274 0 0 chr17 40279470 40279521 -49225032 + L2 LINE L2 3143 3193 -79 319 324 123 20 chr17 40280202 40280446 -49224107 + L2 LINE L2 2910 3178 -94 322 276 8 0 chr17 40280486 40280748 -49223805 + GA-rich Low_complexity Low_complexity 1 264 0 189 0 0 0 chr17 40280755 40280776 -49223777 + (TGGA)n Simple_repeat Simple_repeat 3 23 0 186 209 0 0 chr17 40280872 40280915 -49223638 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 231 61 0 0 chr17 40284095 40284128 -49220425 + (TG)n Simple_repeat Simple_repeat 1 33 0 343 302 72 36 chr17 40285808 40285872 -49218681 - L2 LINE L2 -6 3266 3206 2257 105 0 7 chr17 40285872 40286176 -49218377 + AluSx SINE Alu 1 302 -10 2183 82 14 7 chr17 40286176 40286469 -49218084 + AluSg SINE Alu 1 295 -15 343 302 72 36 chr17 40286469 40286542 -49218011 - L2 LINE L2 -65 3207 3123 288 349 40 26 chr17 40288338 40288490 -49216063 - MIR3 SINE MIR -14 194 41 327 358 51 11 chr17 40289506 40289682 -49214871 - MIR3 SINE MIR -18 190 8 211 298 0 0 chr17 40290599 40290612 -49213941 - L2 LINE L2 0 3313 3301 185 65 32 0 chr17 40290612 40290643 -49213910 + (CAGTT)n Simple_repeat Simple_repeat 2 33 0 211 298 0 0 chr17 40290643 40290686 -49213867 - L2 LINE L2 -11 3302 3257 421 330 12 0 chr17 40290739 40290912 -49213641 + (CA)n Simple_repeat Simple_repeat 1 175 0 232 265 12 24 chr17 40290961 40291044 -49213509 + (CA)n Simple_repeat Simple_repeat 1 82 0 610 82 206 10 chr17 40291185 40291282 -49213271 + AluSg SINE Alu 1 116 -194 1784 83 79 4 chr17 40291282 40291534 -49213019 + AluSg SINE Alu 22 292 -18 246 370 71 49 chr17 40292290 40292514 -49212039 + L3 LINE CR1 1286 1514 -63 278 265 48 0 chr17 40293202 40293285 -49211268 - L3b LINE CR1 -174 1409 1323 437 279 102 0 chr17 40294243 40294390 -49210163 - MIR SINE MIR -55 207 46 409 238 177 30 chr17 40295658 40295844 -49208709 + MIR SINE MIR 34 251 -11 198 0 0 0 chr17 40295855 40295877 -49208676 + (CAT)n Simple_repeat Simple_repeat 3 24 0 378 335 86 10 chr17 40295895 40296104 -49208449 + MIR SINE MIR 26 250 -12 699 297 113 3 chr17 40296232 40296569 -49207984 - MLT1K LTR MaLR -9 579 206 588 270 75 11 chr17 40297108 40297282 -49207271 + MIR3 SINE MIR 21 205 -3 480 292 114 52 chr17 40297573 40297801 -49206752 - MIR SINE MIR -31 231 1 766 256 134 25 chr17 40297851 40298128 -49206425 - L2 LINE L2 -1 3312 3006 602 296 59 10 chr17 40298146 40298358 -49206195 + MIR SINE MIR 37 261 -1 241 245 43 53 chr17 40298457 40298551 -49206002 + MIR3 SINE MIR 11 103 -105 358 287 60 8 chr17 40298654 40298785 -49205768 + MIR SINE MIR 57 192 -35 478 254 99 22 chr17 40299355 40299536 -49205017 + MIR3 SINE MIR 7 201 -7 1408 278 102 24 chr17 40300498 40301248 -49203305 + L2 LINE L2 2436 3251 -62 507 303 74 6 chr17 40301410 40301572 -49202981 + MIR3 SINE MIR 31 203 -5 349 266 61 3 chr17 40301625 40301748 -49202805 + MIR SINE MIR 21 153 -63 2069 121 0 29 chr17 40304251 40304565 -49199988 - AluSx SINE Alu -7 305 1 220 208 0 0 chr17 40304960 40305013 -49199540 + A-rich Low_complexity Low_complexity 2 54 0 411 83 0 0 chr17 40305719 40305779 -49198774 + (CA)n Simple_repeat Simple_repeat 2 61 0 216 0 0 0 chr17 40307859 40307883 -49196670 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1736 132 40 4 chr17 40307885 40308158 -49196395 - AluSx SINE Alu -29 283 1 2233 73 7 10 chr17 40308642 40308943 -49195610 - AluSp SINE Alu -13 300 1 959 114 0 0 chr17 40308967 40309098 -49195455 - AluSg SINE Alu -179 131 1 470 209 47 0 chr17 40309100 40309186 -49195367 - AluJ/FLAM SINE Alu -222 90 1 243 333 61 10 chr17 40309329 40309428 -49195125 - L2 LINE L2 0 3272 3169 376 218 127 9 chr17 40309753 40309863 -49194690 + L2 LINE L2 3191 3313 0 204 232 256 24 chr17 40309958 40310083 -49194470 - L2 LINE L2 -843 2471 2318 292 349 24 34 chr17 40310206 40310415 -49194138 - L2 LINE L2 -1067 2247 2041 410 63 0 16 chr17 40310739 40310802 -49193751 + (TG)n Simple_repeat Simple_repeat 2 63 0 2144 106 0 3 chr17 40310856 40311149 -49193404 + AluSx SINE Alu 1 292 -20 1602 171 0 4 chr17 40311177 40311434 -49193119 + AluJb SINE Alu 34 289 -23 1021 101 0 7 chr17 40311469 40311607 -49192946 + AluSq/x SINE Alu 1 137 -176 1997 116 3 29 chr17 40312081 40312391 -49192162 - AluY SINE Alu -7 304 3 1814 151 3 11 chr17 40312410 40312695 -49191858 - AluSx SINE Alu -29 283 1 2221 67 0 29 chr17 40313631 40313946 -49190607 + AluSx SINE Alu 1 306 -6 1555 181 3 29 chr17 40314075 40314385 -49190168 + AluJo SINE Alu 1 302 -10 2120 110 0 25 chr17 40314386 40314704 -49189849 + AluY SINE Alu 1 310 -1 1994 126 0 31 chr17 40314724 40315042 -49189511 + AluSq SINE Alu 1 308 -5 1212 92 0 78 chr17 40315126 40315149 -49189404 + AluSp SINE Alu 120 143 -170 1936 170 0 7 chr17 40315149 40315455 -49189098 + AluSp SINE Alu 1 304 -9 1212 92 0 78 chr17 40315455 40315637 -49188916 + AluSp SINE Alu 143 309 -4 466 232 125 0 chr17 40315653 40315765 -49188788 + FLAM_A SINE Alu 10 135 -7 2053 89 0 49 chr17 40315812 40316139 -49188414 + AluSx SINE Alu 1 311 -1 242 362 32 11 chr17 40316999 40317093 -49187460 + L2 LINE L2 3148 3243 -29 2173 59 0 56 chr17 40318312 40318636 -49185917 - AluY SINE Alu -5 306 1 303 369 31 38 chr17 40320505 40320665 -49183888 - L3b LINE CR1 -11 1572 1414 2237 93 0 26 chr17 40320933 40321243 -49183310 + AluSx SINE Alu 1 302 -10 273 146 55 82 chr17 40321320 40321355 -49183198 + HAL1 LINE L1 1231 1265 -1242 1568 153 17 49 chr17 40321355 40321642 -49182911 + AluJo SINE Alu 2 279 -33 273 146 55 82 chr17 40321642 40321716 -49182837 + HAL1 LINE L1 1265 1337 -1170 289 254 11 103 chr17 40321719 40321904 -49182649 + HAL1 LINE L1 2035 2202 -305 885 129 0 14 chr17 40321993 40322132 -49182421 + AluSq/x SINE Alu 1 137 -175 2091 89 9 41 chr17 40322132 40322447 -49182106 + AluSx SINE Alu 1 305 -7 2032 105 0 42 chr17 40322824 40323137 -49181416 - AluSp SINE Alu -13 300 1 591 94 35 0 chr17 40323395 40323480 -49181073 - AluS SINE Alu -221 91 4 317 148 0 7 chr17 40323483 40323551 -49181002 + Alu SINE Alu 245 296 -6 2178 119 0 3 chr17 40323983 40324295 -49180258 + AluSq SINE Alu 1 311 -2 422 331 28 0 chr17 40324329 40324474 -49180079 + MIR SINE MIR 2 150 -112 28 71 0 0 chr17 40325138 40325194 -49179359 + GC_rich Low_complexity Low_complexity 1 56 0 1923 129 0 37 chr17 40325475 40325792 -49178761 - AluSq SINE Alu 0 306 1 1197 195 70 79 chr17 40325890 40325928 -49178625 - Charlie1b DNA MER1_type -2240 521 484 2284 101 0 7 chr17 40325928 40326236 -49178317 - AluSx SINE Alu -6 306 1 2111 108 3 0 chr17 40326237 40326532 -49178021 - AluSp SINE Alu -17 296 1 1197 195 70 79 chr17 40326532 40326712 -49177841 - Charlie1b DNA MER1_type -2277 484 304 1530 150 87 0 chr17 40326712 40326966 -49177587 + AluJb SINE Alu 11 306 0 181 0 0 0 chr17 40326966 40326986 -49177567 + (TAAAA)n Simple_repeat Simple_repeat 5 105 0 1197 195 70 79 chr17 40326986 40327244 -49177309 - Charlie1b DNA MER1_type -2457 304 44 2182 56 7 36 chr17 40327265 40327569 -49176984 + AluY SINE Alu 1 295 -16 1526 104 0 9 chr17 40327585 40327806 -49176747 + AluSp SINE Alu 1 219 -94 799 212 22 11 chr17 40328116 40328295 -49176258 + AluSg/x SINE Alu 132 312 0 806 128 0 0 chr17 40328414 40328523 -49176030 + AluJb SINE Alu 7 115 -197 888 181 0 0 chr17 40328523 40328678 -49175875 + AluSg/x SINE Alu 158 312 0 2214 64 3 41 chr17 40328688 40329002 -49175551 + AluY SINE Alu 1 302 -9 1260 135 8 81 chr17 40329717 40329976 -49174577 + AluJb SINE Alu 40 279 -33 1138 83 12 153 chr17 40329995 40330249 -49174304 + AluY SINE Alu 93 310 -1 1362 163 90 10 chr17 40331021 40331310 -49173243 + AluJo SINE Alu 1 312 0 2206 77 0 23 chr17 40331320 40331620 -49172933 + AluY SINE Alu 1 293 -18 252 0 0 0 chr17 40331664 40331692 -49172861 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1306 190 21 4 chr17 40331692 40331934 -49172619 - AluJb SINE Alu -32 280 35 329 137 41 41 chr17 40331947 40332020 -49172533 + L1MB1 LINE L1 5779 5851 -317 2272 88 0 0 chr17 40332458 40332753 -49171800 - AluSx SINE Alu -17 295 1 2320 82 3 0 chr17 40332764 40333068 -49171485 - AluSx SINE Alu -7 305 1 1904 148 0 3 chr17 40333122 40333426 -49171127 + AluJb SINE Alu 10 312 0 2228 170 50 7 chr17 40333481 40334019 -49170534 + L1MB1 LINE L1 4940 6167 -1 471 144 0 22 chr17 40334068 40334158 -49170395 + FLAM_C SINE Alu 54 141 -2 1366 130 27 96 chr17 40334159 40334341 -49170212 + L1M4 LINE L1 5021 5165 -981 2336 97 0 0 chr17 40334341 40334652 -49169901 + AluSx SINE Alu 1 311 -1 1366 130 27 96 chr17 40334652 40334845 -49169708 + L1M4 LINE L1 5165 5370 -776 828 142 0 0 chr17 40334857 40334984 -49169569 + FLAM_C SINE Alu 12 138 -5 2072 137 0 0 chr17 40334990 40335296 -49169257 + AluSx SINE Alu 1 306 -6 1316 142 19 52 chr17 40335297 40335378 -49169175 + L1M4 LINE L1 5360 5442 -742 2155 112 3 0 chr17 40335378 40335681 -49168872 + AluSx SINE Alu 1 304 -8 1316 142 19 52 chr17 40335681 40335866 -49168687 + L1M4 LINE L1 5442 5617 -567 241 302 0 0 chr17 40337061 40337124 -49167429 + MIR SINE MIR 85 147 -61 198 258 75 50 chr17 40338028 40338148 -49166405 - L3 LINE CR1 -267 1310 1188 25 0 0 0 chr17 40338938 40338963 -49165590 + GC_rich Low_complexity Low_complexity 1 25 0 279 213 28 46 chr17 40339056 40339164 -49165389 + (CCCCG)n Simple_repeat Simple_repeat 4 109 0 2429 58 0 10 chr17 40340492 40340801 -49163752 - AluY SINE Alu -5 306 1 273 338 45 32 chr17 40342639 40342796 -49161757 - L3b LINE CR1 -11 1572 1414 2303 84 0 0 chr17 40343064 40343361 -49161192 + AluSx SINE Alu 1 297 -15 328 147 55 73 chr17 40343438 40343473 -49161080 + HAL1 LINE L1 1231 1265 -1242 1553 154 18 42 chr17 40343473 40343758 -49160795 + AluJo SINE Alu 2 279 -33 328 147 55 73 chr17 40343758 40343831 -49160722 + HAL1 LINE L1 1265 1337 -1170 518 293 33 87 chr17 40343834 40344104 -49160449 + HAL1 LINE L1 2035 2318 -189 1886 157 0 25 chr17 40344104 40344241 -49160312 + AluSx SINE Alu 1 140 -172 2170 87 27 3 chr17 40344241 40344540 -49160013 + AluSx SINE Alu 1 306 -6 2324 90 0 0 chr17 40344542 40344841 -49159712 + AluSp SINE Alu 3 301 -12 1886 157 0 25 chr17 40344841 40345019 -49159534 + AluSx SINE Alu 141 311 -1 518 293 33 87 chr17 40345019 40345172 -49159381 + HAL1 LINE L1 2318 2435 -72 800 161 0 0 chr17 40345203 40345327 -49159226 - FLAM_C SINE Alu -17 126 3 789 248 0 12 chr17 40345363 40345524 -49159029 - AluJo SINE Alu -27 285 127 1938 146 3 0 chr17 40345532 40345827 -49158726 - AluSx SINE Alu -16 296 1 2122 97 3 3 chr17 40346755 40347054 -49157499 + AluSq SINE Alu 1 299 -14 1298 103 0 0 chr17 40347054 40347228 -49157325 + AluSp SINE Alu 134 307 -6 471 232 125 0 chr17 40347244 40347356 -49157197 + FLAM_A SINE Alu 10 135 -7 2403 66 3 0 chr17 40347401 40347704 -49156849 + AluSx SINE Alu 1 304 -8 346 325 68 0 chr17 40348555 40348672 -49155881 + L2 LINE L2 3148 3272 0 252 149 0 0 chr17 40348785 40348832 -49155721 + (TTC)n Simple_repeat Simple_repeat 2 48 0 1971 127 7 10 chr17 40348898 40349198 -49155355 + AluSx SINE Alu 7 305 -7 2090 112 0 16 chr17 40349203 40349506 -49155047 + AluSg SINE Alu 1 298 -12 2186 90 0 26 chr17 40349508 40349818 -49154735 + AluY SINE Alu 3 304 -7 2229 88 7 0 chr17 40350193 40350490 -49154063 - AluSp SINE Alu -14 299 1 249 200 0 0 chr17 40350934 40350984 -49153569 + CT-rich Low_complexity Low_complexity 2 51 0 1983 136 0 16 chr17 40351064 40351372 -49153181 + AluSx SINE Alu 7 309 -3 1856 134 0 23 chr17 40351377 40351682 -49152871 + AluSg SINE Alu 1 298 -12 2105 66 0 75 chr17 40351684 40352019 -49152534 + AluY SINE Alu 2 311 0 1451 160 25 7 chr17 40352055 40352106 -49152447 + L1MB3 LINE L1 5859 5908 -275 1964 100 60 20 chr17 40352106 40352406 -49152147 - AluSp SINE Alu -1 312 1 1451 160 25 7 chr17 40352406 40352629 -49151924 + L1MB3 LINE L1 5908 6138 -45 1023 108 12 30 chr17 40352629 40352795 -49151758 + AluSc SINE Alu 147 309 0 823 223 6 6 chr17 40353067 40353233 -49151320 - AluJb SINE Alu -13 299 134 1614 157 3 31 chr17 40353234 40353521 -49151032 - AluJo SINE Alu -12 300 22 269 318 38 30 chr17 40354685 40354817 -49149736 - L2 LINE L2 -1 3312 3180 252 313 69 30 chr17 40357136 40357267 -49147286 + MIR3 SINE MIR 42 177 -31 1800 157 0 10 chr17 40357747 40358046 -49146507 - AluJb SINE Alu -16 296 1 994 176 12 0 chr17 40358046 40358211 -49146342 - AluJo SINE Alu -13 299 133 2236 73 6 32 chr17 40359150 40359466 -49145087 + AluSq SINE Alu 1 308 -5 1997 108 3 19 chr17 40359846 40360153 -49144400 - AluSq SINE Alu -7 306 5 926 137 0 0 chr17 40360665 40360796 -49143757 - AluJo SINE Alu -171 131 1 259 282 261 7 chr17 40360820 40360962 -49143591 + MER5A DNA MER1_type 7 184 -5 275 272 12 0 chr17 40360971 40361052 -49143501 + L1ME3A LINE L1 6080 6161 -9 2172 82 6 25 chr17 40361656 40361973 -49142580 + AluSq SINE Alu 1 311 -2 1417 197 75 4 chr17 40363346 40363625 -49140928 - AluJo SINE Alu -13 299 1 227 241 19 0 chr17 40363710 40363764 -49140789 + L2 LINE L2 3010 3064 -208 2018 116 0 28 chr17 40363896 40364216 -49140337 - AluSq SINE Alu -2 311 1 206 279 0 44 chr17 40364262 40364330 -49140223 + L2 LINE L2 3206 3270 -2 2113 79 7 4 chr17 40364496 40364809 -49139744 - AluY SINE Alu 0 314 1 269 247 14 14 chr17 40365046 40365119 -49139434 - L1M4 LINE L1 -1339 4807 4735 1908 145 0 7 chr17 40366392 40366696 -49137857 + AluJb SINE Alu 1 302 -10 184 211 184 0 chr17 40366803 40366879 -49137674 - L3 LINE CR1 -174 1403 1314 594 314 12 58 chr17 40367203 40367352 -49137201 + MIR SINE MIR 12 147 -115 2091 118 3 0 chr17 40367352 40367648 -49136905 + AluSx SINE Alu 2 298 -14 594 314 12 58 chr17 40367648 40367740 -49136813 + MIR SINE MIR 147 242 -20 473 312 111 43 chr17 40367829 40368153 -49136400 + L2 LINE L2 2926 3271 -1 826 331 21 7 chr17 40368166 40368450 -49136103 - L3 LINE CR1 -682 895 608 362 365 0 0 chr17 40368469 40368606 -49135947 - MIR SINE MIR -3 259 123 1408 239 65 11 chr17 40368609 40368981 -49135572 + MLT1J1 LTR MaLR 52 443 -3 205 306 61 20 chr17 40369016 40369114 -49135439 - MIR SINE MIR -128 134 33 1025 201 11 0 chr17 40369578 40369752 -49134801 - MER45A DNA AcHobo -2 176 1 314 242 81 0 chr17 40370774 40370873 -49133680 - MIR SINE MIR -70 138 32 216 246 49 0 chr17 40373392 40373453 -49131100 - MIR SINE MIR -96 166 103 411 267 78 0 chr17 40373574 40373690 -49130863 - MIR3 SINE MIR -21 187 63 237 298 107 0 chr17 40374545 40374629 -49129924 - MIR3 SINE MIR -25 183 91 23 0 0 0 chr17 40375207 40375230 -49129323 + GC_rich Low_complexity Low_complexity 1 23 0 331 271 25 37 chr17 40377184 40377395 -49127158 + GA-rich Low_complexity Low_complexity 1 208 0 204 40 0 0 chr17 40378170 40378195 -49126358 + (TGGGGG)n Simple_repeat Simple_repeat 4 28 0 188 65 0 32 chr17 40378773 40378804 -49125749 + (CATATA)n Simple_repeat Simple_repeat 2 31 0 220 230 27 27 chr17 40379911 40379985 -49124568 + L3 LINE CR1 1387 1460 -117 471 239 82 14 chr17 40380005 40380173 -49124380 + MER5B DNA MER1_type 5 175 -3 225 0 0 0 chr17 40380264 40380289 -49124264 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 699 46 0 0 chr17 40380292 40380379 -49124174 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 1142 201 201 0 chr17 40380387 40380646 -49123907 - AluJb SINE Alu -1 311 1 622 279 39 17 chr17 40380656 40380835 -49123718 - MIR SINE MIR -78 184 2 239 320 170 0 chr17 40382007 40382207 -49122346 - L2 LINE L2 -212 3060 2827 309 227 13 40 chr17 40384714 40384789 -49119764 + L2 LINE L2 3200 3272 0 180 97 0 0 chr17 40386212 40386243 -49118310 + (CCG)n Simple_repeat Simple_repeat 1 31 0 28 29 0 0 chr17 40386266 40386301 -49118252 + GC_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr17 40386365 40386408 -49118145 + GC_rich Low_complexity Low_complexity 1 43 0 1742 126 41 38 chr17 40388697 40388990 -49115563 - AluJb SINE Alu -18 294 1 228 333 184 9 chr17 40389318 40389432 -49115121 - L2 LINE L2 -2 3270 3137 243 342 104 42 chr17 40390412 40390652 -49113901 + L2 LINE L2 2836 3090 -182 29 28 0 0 chr17 40392127 40392163 -49112390 + GC_rich Low_complexity Low_complexity 1 36 0 264 59 0 0 chr17 40393719 40393753 -49110800 + (CA)n Simple_repeat Simple_repeat 2 35 0 358 302 69 0 chr17 40393916 40394032 -49110521 - MIR SINE MIR -90 172 49 1720 188 3 10 chr17 40394262 40394565 -49109988 - AluJo SINE Alu 0 312 12 2203 116 0 3 chr17 40394566 40394877 -49109676 + AluSg SINE Alu 1 310 0 243 239 68 8 chr17 40395005 40395122 -49109431 - MER113 DNA MER1_type? -361 160 37 1853 125 10 27 chr17 40396515 40396810 -49107743 - AluJo SINE Alu -16 296 7 192 191 26 0 chr17 40396848 40396903 -49107650 + MIR SINE MIR 97 152 -57 2423 77 3 0 chr17 40396983 40397294 -49107259 - AluSq SINE Alu -1 312 1 198 167 0 0 chr17 40398283 40398319 -49106234 + GA-rich Low_complexity Low_complexity 1 36 0 186 71 0 0 chr17 40398699 40398727 -49105826 + (CA)n Simple_repeat Simple_repeat 1 28 0 263 302 0 0 chr17 40399902 40399965 -49104588 - MIR SINE MIR -60 148 86 247 308 15 0 chr17 40401428 40401493 -49103060 + MIR SINE MIR 71 136 -72 186 167 0 0 chr17 40401501 40401537 -49103016 + GA-rich Low_complexity Low_complexity 2 37 0 581 67 0 0 chr17 40402582 40402657 -49101896 - AluS SINE Alu -238 75 1 2109 114 7 0 chr17 40403687 40403977 -49100576 - AluSx SINE Alu -20 292 1 479 332 78 16 chr17 40403977 40404221 -49100332 - MIR SINE MIR -1 261 3 234 360 79 0 chr17 40404816 40404955 -49099598 - L3 LINE CR1 -383 1194 1045 626 297 68 0 chr17 40405924 40406129 -49098424 + MIR SINE MIR 14 231 -31 183 193 0 158 chr17 40406103 40406160 -49098393 + L2 LINE L2 3251 3298 -15 * 506 356 28 0 chr17 40406947 40407127 -49097426 + MIR SINE MIR 76 260 -2 294 211 0 0 chr17 40407435 40407492 -49097061 + L3 LINE CR1 1418 1474 -103 631 296 63 14 chr17 40408024 40408247 -49096306 - MIR SINE MIR -7 255 22 316 281 37 0 chr17 40408577 40408659 -49095894 + L2 LINE L2 3214 3298 -15 2237 82 0 0 chr17 40408677 40408957 -49095596 - AluSg SINE Alu -30 280 1 231 250 0 0 chr17 40408973 40409021 -49095532 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 237 333 0 0 chr17 40409238 40409310 -49095243 + (CA)n Simple_repeat Simple_repeat 1 72 0 758 298 55 8 chr17 40410914 40411152 -49093401 - MIR SINE MIR -13 249 1 255 125 0 0 chr17 40412430 40412470 -49092083 + (TG)n Simple_repeat Simple_repeat 2 41 0 431 244 64 11 chr17 40412601 40412752 -49091801 - MIR3 SINE MIR -27 181 13 321 297 0 85 chr17 40413033 40413151 -49091402 - L3b LINE CR1 -200 1383 1276 253 275 12 12 chr17 40413430 40413510 -49091043 - MIR SINE MIR -8 254 175 525 256 71 12 chr17 40414533 40414701 -49089852 - MIR3 SINE MIR -14 194 17 390 115 0 0 chr17 40415063 40415124 -49089429 + (CA)n Simple_repeat Simple_repeat 2 62 0 294 255 11 75 chr17 40415281 40415469 -49089084 + GA-rich Low_complexity Low_complexity 1 176 0 216 111 0 0 chr17 40415628 40415664 -49088889 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 348 143 36 0 chr17 40416605 40416689 -49087864 + GA-rich Low_complexity Low_complexity 1 87 0 291 262 8 56 chr17 40418673 40418799 -49085754 + C-rich Low_complexity Low_complexity 4 123 0 241 230 23 23 chr17 40418954 40419041 -49085512 + C-rich Low_complexity Low_complexity 4 90 0 57 85 0 0 chr17 40419147 40419288 -49085265 + GC_rich Low_complexity Low_complexity 1 141 0 357 302 7 13 chr17 40419315 40419464 -49085089 + (CG)n Simple_repeat Simple_repeat 1 148 0 28 0 0 0 chr17 40419479 40419507 -49085046 + GC_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr17 40419563 40419594 -49084959 + GC_rich Low_complexity Low_complexity 1 31 0 432 306 16 0 chr17 40423403 40423527 -49081026 - MER5A DNA MER1_type 0 189 64 2375 93 0 0 chr17 40423527 40423839 -49080714 - AluSx SINE Alu 0 312 1 299 118 0 0 chr17 40423851 40423902 -49080651 - AluSp/q SINE Alu -4 299 249 2234 105 3 3 chr17 40424158 40424462 -49080091 + AluSq SINE Alu 1 304 -9 2196 99 7 0 chr17 40424494 40424797 -49079756 + AluSx SINE Alu 2 306 -6 221 206 0 32 chr17 40424958 40425021 -49079532 + GA-rich Low_complexity Low_complexity 4 64 0 884 129 35 2 chr17 40425438 40425687 -49078866 + L1MB5 LINE L1 5511 5873 -311 750 192 0 0 chr17 40425687 40425812 -49078741 + FLAM_C SINE Alu 1 125 -18 1352 161 84 21 chr17 40425828 40426114 -49078439 + L1MB5 LINE L1 5861 6164 -10 1867 83 0 0 chr17 40426549 40426779 -49077774 - AluSx SINE Alu -62 250 21 486 175 361 3 chr17 40427143 40427362 -49077191 + MER5C DNA MER1_type 1 323 -1 246 32 0 0 chr17 40427475 40427506 -49077047 + (CA)n Simple_repeat Simple_repeat 2 32 0 210 333 14 48 chr17 40427507 40427654 -49076899 + L2 LINE L2 2916 3057 -215 2359 105 0 22 chr17 40428103 40428418 -49076135 + AluSc SINE Alu 1 308 -1 1873 138 16 53 chr17 40428435 40428554 -49075999 + AluJb SINE Alu 1 123 -189 2412 86 0 0 chr17 40428554 40428844 -49075709 - AluSg SINE Alu -20 290 1 1873 138 16 53 chr17 40428844 40429044 -49075509 + AluJb SINE Alu 123 308 -4 2126 132 13 0 chr17 40429063 40429367 -49075186 - AluSx SINE Alu -4 308 1 1236 156 0 0 chr17 40429468 40429673 -49074880 + AluJb SINE Alu 132 336 0 400 267 114 0 chr17 40430162 40430267 -49074286 - MIR SINE MIR -118 144 28 199 301 98 68 chr17 40430884 40431150 -49073403 - L2 LINE L2 -179 3093 2820 1839 148 46 11 chr17 40431438 40431722 -49072831 + AluJb SINE Alu 1 294 -18 210 37 0 0 chr17 40431722 40431749 -49072804 + (GA)n Simple_repeat Simple_repeat 2 28 0 496 303 82 0 chr17 40431850 40432045 -49072508 - MIR SINE MIR -24 238 28 2460 82 0 0 chr17 40432064 40432369 -49072184 - AluY SINE Alu -6 305 1 340 286 53 45 chr17 40432514 40432530 -49072023 - MIR3 SINE MIR -72 136 122 1883 132 37 0 chr17 40432530 40432829 -49071724 + AluSx SINE Alu 1 309 0 340 286 53 45 chr17 40432829 40432943 -49071610 - MIR3 SINE MIR -86 122 3 348 238 238 16 chr17 40432992 40433118 -49071435 + MIR SINE MIR 103 256 -6 250 308 87 10 chr17 40433099 40433203 -49071350 - L2 LINE L2 -7 3306 3195 * 354 175 0 0 chr17 40433861 40433918 -49070635 - MIR SINE MIR -62 146 90 2335 106 0 3 chr17 40434621 40434923 -49069630 - AluSx SINE Alu -11 301 1 1793 244 106 35 chr17 40435246 40435780 -49068773 + L1ME1 LINE L1 4074 4682 -1464 2263 119 3 3 chr17 40435780 40436091 -49068462 + AluSx SINE Alu 1 311 -1 1793 244 106 35 chr17 40436091 40436333 -49068220 + L1ME1 LINE L1 4682 4905 -1241 1991 158 7 0 chr17 40436333 40436630 -49067923 + AluJb SINE Alu 2 300 -12 1145 179 0 0 chr17 40436634 40436813 -49067740 + FRAM SINE Alu 1 173 -3 2382 98 3 0 chr17 40436813 40437119 -49067434 + AluSx SINE Alu 1 307 -5 873 163 93 57 chr17 40437120 40437249 -49067304 + L1ME1 LINE L1 5203 5326 -916 1957 124 29 0 chr17 40437249 40437566 -49066987 + AluSx SINE Alu 1 325 0 873 163 93 57 chr17 40437566 40437577 -49066976 + L1ME1 LINE L1 5326 5335 -907 1721 149 44 37 chr17 40437577 40437707 -49066846 + AluJb SINE Alu 1 129 -183 2475 75 0 25 chr17 40437707 40438025 -49066528 + AluSx SINE Alu 1 310 -2 1721 149 44 37 chr17 40438025 40438190 -49066363 + AluJb SINE Alu 129 298 -14 873 163 93 57 chr17 40438190 40438414 -49066139 + L1ME1 LINE L1 5335 5586 -656 1138 148 17 0 chr17 40438431 40438607 -49065946 - AluSg/x SINE Alu 0 312 134 2402 93 0 0 chr17 40438607 40438907 -49065646 - AluSx SINE Alu -12 300 1 782 241 79 28 chr17 40438916 40439206 -49065347 + L1ME1 LINE L1 5857 6161 -5 403 289 127 25 chr17 40439258 40439745 -49064808 + L1MC/D LINE L1 4151 4687 -1459 24 0 0 0 chr17 40439992 40440016 -49064537 + AT_rich Low_complexity Low_complexity 1 24 0 2269 98 0 13 chr17 40440016 40440322 -49064231 - AluSx SINE Alu 0 312 11 358 312 101 7 chr17 40440600 40440738 -49063815 + L1MC/D LINE L1 4906 5056 -1090 198 136 0 0 chr17 40440745 40440789 -49063764 + (T)n Simple_repeat Simple_repeat 1 44 0 2307 101 0 0 chr17 40440940 40441238 -49063315 + AluSq SINE Alu 1 298 -15 383 356 35 16 chr17 40441297 40441396 -49063157 + L1MC/D LINE L1 5255 5351 -2457 1684 169 63 25 chr17 40441396 40441680 -49062873 - AluJo SINE Alu -15 297 3 383 356 35 16 chr17 40441680 40441881 -49062672 + L1MC/D LINE L1 5351 5641 -2167 679 238 15 81 chr17 40441885 40442158 -49062395 + MLT1K LTR MaLR 10 264 -324 464 270 80 6 chr17 40442187 40442350 -49062203 + MLT1K LTR MaLR 342 516 -72 1113 88 0 7 chr17 40442361 40442497 -49062056 + AluSq/x SINE Alu 1 135 -177 1962 147 3 0 chr17 40442497 40442805 -49061748 + AluJb SINE Alu 1 309 0 2399 103 0 0 chr17 40442866 40443176 -49061377 - AluSg SINE Alu 0 310 1 754 138 48 0 chr17 40443199 40443314 -49061239 - MER44D DNA MER2_type -1915 572 447 2395 108 0 0 chr17 40443314 40443621 -49060932 + AluSx SINE Alu 1 307 -5 754 138 48 0 chr17 40443621 40443650 -49060903 - MER44D DNA MER2_type -2040 447 421 5722 68 80 5 chr17 40443652 40444456 -49060097 + SVA Other Other 3 866 -520 1215 48 0 34 chr17 40444471 40444680 -49059873 + SVA Other Other 665 866 -520 1058 89 122 24 chr17 40444708 40444955 -49059598 + SVA Other Other 596 866 -520 6561 31 12 3 chr17 40444983 40445747 -49058806 + SVA Other Other 635 1386 0 465 230 0 10 chr17 40445762 40445862 -49058691 - MER44D DNA MER2_type -240 369 1 336 125 0 0 chr17 40445897 40445961 -49058592 + (CA)n Simple_repeat Simple_repeat 2 65 0 1968 116 29 0 chr17 40446016 40446329 -49058224 - AluSx SINE Alu 0 321 1 890 152 0 0 chr17 40446378 40446510 -49058043 - FLAM_C SINE Alu 0 133 2 430 262 29 0 chr17 40446535 40446638 -49057915 - L2 LINE L2 -2 3311 3206 2089 127 3 7 chr17 40446681 40446981 -49057572 + AluSx SINE Alu 5 303 -9 465 378 9 22 chr17 40446994 40447216 -49057337 + L2 LINE L2 1126 1344 -1970 2244 102 0 0 chr17 40447238 40447522 -49057031 + AluSg SINE Alu 1 284 -26 420 222 52 89 chr17 40447557 40447612 -49056941 + MLT1I LTR MaLR 40 95 -314 2329 59 38 10 chr17 40447612 40447902 -49056651 + AluY SINE Alu 1 298 -13 420 222 52 89 chr17 40447902 40447981 -49056572 + MLT1I LTR MaLR 95 169 -240 1078 191 0 0 chr17 40447992 40448186 -49056367 - L1PB3 LINE L1 -10 6144 5951 1192 103 0 0 chr17 40448186 40448341 -49056212 - AluSg/x SINE Alu -27 285 131 1092 301 128 65 chr17 40448341 40448515 -49056038 + L2 LINE L2 1804 1966 -1348 2460 86 3 3 chr17 40448515 40448828 -49055725 + AluSp SINE Alu 1 313 0 1092 301 128 65 chr17 40448828 40448866 -49055687 + L2 LINE L2 1966 2000 -1314 2434 94 0 0 chr17 40448866 40449174 -49055379 - AluSg SINE Alu -2 308 1 1092 301 128 65 chr17 40449174 40449582 -49054971 + L2 LINE L2 2000 2381 -933 1841 99 43 139 chr17 40449582 40449955 -49054598 + MER1B DNA MER1_type 1 337 0 1092 301 128 65 chr17 40449955 40449975 -49054578 + L2 LINE L2 2381 2398 -916 2281 94 3 7 chr17 40449975 40450273 -49054280 - AluSx SINE Alu -15 297 1 1092 301 128 65 chr17 40450273 40450481 -49054072 + L2 LINE L2 2398 2709 -605 658 226 41 0 chr17 40450481 40450676 -49053877 + L1ME2 LINE L1 2193 2395 -4001 842 144 0 27 chr17 40450676 40450822 -49053731 + FLAM_C SINE Alu 1 142 -1 2422 221 64 69 chr17 40450832 40450945 -49053608 + L1ME2 LINE L1 2347 2459 -3756 2189 123 0 22 chr17 40450945 40451262 -49053291 + AluSx SINE Alu 3 312 0 2422 221 64 69 chr17 40451262 40451382 -49053171 + L1ME2 LINE L1 2459 2578 -3637 1830 171 3 16 chr17 40451382 40451697 -49052856 + AluJo SINE Alu 1 311 -1 2422 221 64 69 chr17 40451697 40452467 -49052086 + L1ME2 LINE L1 2578 3346 -2869 2358 95 6 16 chr17 40452513 40452828 -49051725 + AluSx SINE Alu 1 312 0 986 265 32 67 chr17 40452845 40453104 -49051449 + L1ME2 LINE L1 3309 3576 -2639 2309 106 3 0 chr17 40453104 40453406 -49051147 + AluSg SINE Alu 1 303 -7 986 265 32 67 chr17 40453406 40453430 -49051123 + L1ME2 LINE L1 3576 3599 -2616 2195 103 7 0 chr17 40453430 40453761 -49050792 + AluSx SINE Alu 1 333 0 986 265 32 67 chr17 40453761 40454011 -49050542 + L1ME2 LINE L1 3599 3825 -2390 2272 123 3 0 chr17 40454013 40454322 -49050231 + AluSx SINE Alu 1 310 -2 2342 91 3 3 chr17 40454328 40454624 -49049929 + AluSp SINE Alu 1 296 -17 1411 191 4 12 chr17 40454693 40454949 -49049604 - AluJo SINE Alu -13 299 46 909 150 0 0 chr17 40454952 40455085 -49049468 - AluJo/FLAM SINE Alu -169 133 1 3787 209 104 48 chr17 40455097 40456053 -49048500 + L1ME2 LINE L1 3842 4743 -1490 2549 71 3 0 chr17 40456053 40456361 -49048192 + AluY SINE Alu 1 309 -2 3787 209 104 48 chr17 40456361 40456869 -49047684 + L1ME2 LINE L1 4743 5221 -1012 1951 147 3 10 chr17 40456869 40457161 -49047392 + AluJb SINE Alu 1 290 -22 3787 209 104 48 chr17 40457161 40457215 -49047338 + L1ME2 LINE L1 5221 5271 -962 2235 68 47 0 chr17 40457215 40457493 -49047060 + AluSx SINE Alu 1 291 -21 3787 209 104 48 chr17 40457493 40457792 -49046761 + L1ME2 LINE L1 5271 5552 -681 2115 125 3 0 chr17 40457792 40458095 -49046458 - AluSx SINE Alu -6 306 3 3787 209 104 48 chr17 40458095 40458537 -49046016 + L1ME2 LINE L1 5552 6233 0 886 241 72 13 chr17 40458557 40458818 -49045735 + L1ME3 LINE L1 3962 4242 -1904 2373 80 3 7 chr17 40458818 40459120 -49045433 + AluY SINE Alu 1 301 -10 886 241 72 13 chr17 40459120 40459160 -49045393 + L1ME3 LINE L1 4242 4278 -1868 2199 106 7 10 chr17 40459167 40459469 -49045084 + AluSx SINE Alu 1 301 -11 1106 258 67 19 chr17 40459473 40459891 -49044662 + L1ME3 LINE L1 4776 5213 -933 534 245 121 7 chr17 40460002 40460415 -49044138 + L1ME3 LINE L1 5320 5815 -351 810 169 0 0 chr17 40460419 40460555 -49043998 + FLAM_C SINE Alu 3 138 -5 1341 163 88 46 chr17 40460557 40460840 -49043713 + AluJb SINE Alu 1 295 -17 622 152 0 34 chr17 40460840 40460976 -49043577 + L1ME3 LINE L1 5834 5964 -223 274 125 0 0 chr17 40461005 40461045 -49043508 + Alu SINE Alu 1 40 -263 1438 144 0 0 chr17 40461045 40461246 -49043307 + AluSg/x SINE Alu 72 272 -38 899 154 0 0 chr17 40461343 40461479 -49043074 + AluSq/x SINE Alu 2 137 -175 2210 108 0 3 chr17 40461489 40461775 -49042778 + AluSx SINE Alu 16 300 -12 277 262 56 9 chr17 40461775 40461882 -49042671 + L1ME3 LINE L1 6043 6154 -8 490 231 62 78 chr17 40461926 40461952 -49042601 - L1MEc LINE L1 -3944 2452 2427 2430 77 3 3 chr17 40461952 40462250 -49042303 - AluSp SINE Alu -15 298 1 490 231 62 78 chr17 40462250 40462321 -49042232 - L1MEc LINE L1 -3969 2427 2356 1574 182 61 10 chr17 40462321 40462618 -49041935 - AluJb SINE Alu 0 312 1 490 231 62 78 chr17 40462618 40462761 -49041792 - L1MEc LINE L1 -4040 2356 2215 183 42 0 0 chr17 40462830 40462854 -49041699 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1975 145 0 0 chr17 40462856 40463138 -49041415 - AluSx SINE Alu -30 282 1 2206 134 0 0 chr17 40463139 40463445 -49041108 - AluSx SINE Alu -6 306 1 216 0 0 0 chr17 40463447 40463471 -49041082 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 1907 143 21 3 chr17 40463472 40463759 -49040794 - AluSg SINE Alu -18 292 1 2448 250 35 29 chr17 40463763 40464155 -49040398 - L1MEc LINE L1 -5636 760 361 2333 94 3 3 chr17 40464155 40464454 -49040099 - AluSq SINE Alu -14 299 1 2448 250 35 29 chr17 40464454 40464780 -49039773 - L1MEc LINE L1 -6035 361 38 1393 144 0 47 chr17 40464827 40465063 -49039490 - AluJb SINE Alu -3 309 85 1553 172 20 40 chr17 40465100 40465396 -49039157 + AluJo SINE Alu 3 292 -20 305 133 0 0 chr17 40465471 40465560 -49038993 + Alu SINE Alu 238 326 0 652 259 40 81 chr17 40465573 40465740 -49038813 - MIR SINE MIR -12 250 95 2443 58 7 10 chr17 40465740 40466034 -49038519 + AluY SINE Alu 1 293 -18 652 259 40 81 chr17 40466034 40466113 -49038440 - MIR SINE MIR -167 95 14 1217 142 0 0 chr17 40466329 40466505 -49038048 - AluSg/x SINE Alu 0 312 137 2256 128 0 0 chr17 40466506 40466810 -49037743 - AluSq SINE Alu -9 304 1 212 377 87 14 chr17 40467093 40467231 -49037322 - L2 LINE L2 -3 3310 3163 1195 154 51 28 chr17 40467258 40467472 -49037081 - MER20 DNA MER1_type 0 219 1 1623 123 30 105 chr17 40468786 40469118 -49035435 + AluYb8 SINE Alu 5 311 -7 2160 118 31 0 chr17 40469556 40469843 -49034710 + AluSx SINE Alu 3 298 -14 2318 57 35 3 chr17 40469843 40470126 -49034427 + AluY SINE Alu 14 305 -6 2171 87 3 17 chr17 40470150 40470437 -49034116 + AluSx SINE Alu 24 306 -6 431 263 196 15 chr17 40471540 40471673 -49032880 - MER5A DNA MER1_type -6 183 27 1671 173 0 30 chr17 40473022 40473203 -49031350 - AluJo SINE Alu -20 292 122 2628 44 0 0 chr17 40473203 40473499 -49031054 + AluY SINE Alu 1 296 -15 1671 173 0 30 chr17 40473499 40473618 -49030935 - AluJo SINE Alu -190 122 1 2078 105 46 0 chr17 40474254 40474539 -49030014 - AluSx SINE Alu -14 298 1 2043 89 19 0 chr17 40474539 40474798 -49029755 - AluSg SINE Alu -14 296 33 1218 158 0 0 chr17 40474798 40474981 -49029572 - FRAM SINE Alu -1 175 1 1816 187 3 0 chr17 40474988 40475293 -49029260 - AluJb SINE Alu -6 306 1 2310 113 3 6 chr17 40475297 40475608 -49028945 - AluSx SINE Alu -2 310 1 231 218 0 0 chr17 40475630 40475685 -49028868 + (TG)n Simple_repeat Simple_repeat 1 55 0 2051 125 7 3 chr17 40476033 40476328 -49028225 - AluJb SINE Alu -16 296 1 22 35 0 0 chr17 40476430 40476459 -49028094 + AT_rich Low_complexity Low_complexity 1 29 0 461 287 88 27 chr17 40476554 40476966 -49027587 - MLT1J LTR MaLR -12 499 21 241 210 0 48 chr17 40476996 40477058 -49027495 + CT-rich Low_complexity Low_complexity 1 59 0 1761 149 13 48 chr17 40477069 40477378 -49027175 - AluJb SINE Alu -7 305 8 225 266 216 7 chr17 40477401 40477540 -49027013 + L2 LINE L2 2124 2291 -1023 237 391 47 44 chr17 40477929 40478269 -49026284 + L2 LINE L2 2920 3260 -12 1287 261 66 5 chr17 40478286 40478302 -49026251 + L1ME3 LINE L1 5680 5694 -468 2226 117 0 0 chr17 40478302 40478610 -49025943 + AluSx SINE Alu 1 308 -4 1287 261 66 5 chr17 40478610 40479036 -49025517 + L1ME3 LINE L1 5694 6145 -17 1693 178 3 16 chr17 40479083 40479217 -49025336 + AluJb SINE Alu 1 135 -177 2002 95 21 32 chr17 40479217 40479502 -49025051 + AluSx SINE Alu 15 296 -16 2302 98 0 0 chr17 40479504 40479810 -49024743 + AluSg SINE Alu 1 306 -4 1693 178 3 16 chr17 40479810 40479976 -49024577 + AluJb SINE Alu 136 300 -12 200 207 85 24 chr17 40480000 40480099 -49024454 - MIR SINE MIR -57 151 64 468 238 50 56 chr17 40480341 40480397 -49024156 + MIR SINE MIR 103 158 -104 2107 109 0 3 chr17 40480397 40480732 -49023821 + AluSx SINE Alu 1 334 0 468 238 50 56 chr17 40480732 40480834 -49023719 + MIR SINE MIR 158 261 -1 442 224 112 9 chr17 40480854 40481008 -49023545 + MIR SINE MIR 38 217 -45 259 286 66 11 chr17 40481290 40481381 -49023172 - L2 LINE L2 -4 3309 3214 1559 146 6 73 chr17 40481510 40481826 -49022727 - AluJo SINE Alu -12 300 6 192 316 163 50 chr17 40482422 40483170 -49021383 - L2 LINE L2 -681 2633 1801 985 225 175 81 chr17 40483737 40484128 -49020425 + MLT1D LTR MaLR 1 443 -62 2190 94 0 7 chr17 40484128 40484425 -49020128 - AluSc SINE Alu -14 295 1 985 225 175 81 chr17 40484425 40484491 -49020062 + MLT1D LTR MaLR 443 501 -4 186 43 0 0 chr17 40485096 40485119 -49019434 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 24 32 0 0 chr17 40488059 40488090 -49016463 + GC_rich Low_complexity Low_complexity 1 31 0 23 101 0 0 chr17 40488260 40488339 -49016214 + GC_rich Low_complexity Low_complexity 1 79 0 211 211 58 0 chr17 40488848 40488900 -49015653 + MIR SINE MIR 199 253 -9 596 270 86 17 chr17 40489235 40489468 -49015085 + L2 LINE L2 3065 3313 0 414 0 0 0 chr17 40490003 40490049 -49014504 + (CA)n Simple_repeat Simple_repeat 2 47 0 419 262 58 0 chr17 40490497 40490600 -49013953 + MIR SINE MIR 80 188 -74 202 241 190 0 chr17 40490964 40491043 -49013510 - MIR SINE MIR -10 252 159 2275 79 0 3 chr17 40491046 40491336 -49013217 - AluSc SINE Alu -20 289 1 380 155 66 0 chr17 40491343 40491442 -49013111 - L1MB8 LINE L1 0 6174 6062 991 149 13 0 chr17 40491449 40491603 -49012950 - AluY SINE Alu -23 288 133 2151 87 35 0 chr17 40491604 40491891 -49012662 - AluSx SINE Alu -15 297 1 1770 193 72 46 chr17 40491891 40492118 -49012435 - L1MB7 LINE L1 -111 6073 5854 2267 96 3 0 chr17 40492118 40492419 -49012134 - AluSp SINE Alu -11 302 1 1770 193 72 46 chr17 40492419 40492635 -49011918 - L1MB7 LINE L1 -330 5854 5645 1788 148 6 19 chr17 40492635 40492946 -49011607 - AluJo SINE Alu -5 307 1 1770 193 72 46 chr17 40492946 40492973 -49011580 - L1MB7 LINE L1 -539 5645 5620 1767 169 20 0 chr17 40492973 40493275 -49011278 + AluJb SINE Alu 1 308 -4 1770 193 72 46 chr17 40493275 40493326 -49011227 - L1MB7 LINE L1 -564 5620 5536 1989 112 6 38 chr17 40493337 40493474 -49011079 + AluSx SINE Alu 1 141 -171 2025 112 4 0 chr17 40493474 40493783 -49010770 + AluSc SINE Alu 1 310 0 1989 112 6 38 chr17 40493783 40493956 -49010597 + AluSx SINE Alu 141 303 -9 513 227 70 0 chr17 40493957 40494085 -49010468 - MIR SINE MIR -119 143 7 414 312 53 18 chr17 40494251 40494421 -49010132 + MIR SINE MIR 16 191 -71 413 224 48 16 chr17 40494422 40494547 -49010006 - L1MC5 LINE L1 -48 7913 7785 1333 186 46 11 chr17 40494578 40494858 -49009695 + AluJb SINE Alu 11 300 -12 372 198 69 0 chr17 40494867 40494968 -49009585 - L1ME2 LINE L1 -9 6155 6048 2275 55 41 3 chr17 40494972 40495263 -49009290 + AluY SINE Alu 1 302 -9 2124 124 0 19 chr17 40495279 40495593 -49008960 + AluSx SINE Alu 1 308 -4 1815 164 23 3 chr17 40495625 40495930 -49008623 - AluJb SINE Alu -1 311 1 838 187 57 105 chr17 40495946 40496076 -49008477 - L1MC5 LINE L1 -183 7778 7643 2075 137 0 13 chr17 40496076 40496382 -49008171 + AluSx SINE Alu 1 302 -10 838 187 57 105 chr17 40496382 40496669 -49007884 - L1MC5 LINE L1 -318 7643 7381 1943 109 6 59 chr17 40496738 40497060 -49007493 + AluSq SINE Alu 1 305 -8 267 129 129 14 chr17 40497086 40497156 -49007397 + MER53 DNA DNA 112 189 0 425 217 70 43 chr17 40497156 40497271 -49007282 - L2 LINE L2 -36 3277 3160 1819 158 0 20 chr17 40497318 40497616 -49006937 + AluJo SINE Alu 6 297 -15 2237 102 3 0 chr17 40497643 40497948 -49006605 + AluSx SINE Alu 1 306 -6 301 337 117 56 chr17 40498139 40498404 -49006149 - L2 LINE L2 0 3272 2980 1951 132 3 28 chr17 40498404 40498722 -49005831 + AluSx SINE Alu 1 310 -2 301 337 117 56 chr17 40498722 40498797 -49005756 - L2 LINE L2 -292 2980 2911 882 327 146 10 chr17 40498939 40499666 -49004887 + L2 LINE L2 1684 2509 -805 1440 129 0 52 chr17 40499734 40499919 -49004634 - AluJb SINE Alu -13 299 127 2213 86 7 0 chr17 40499919 40500211 -49004342 + AluSp SINE Alu 1 294 -19 1440 129 0 52 chr17 40500211 40500257 -49004296 - AluJb SINE Alu -185 127 80 455 277 0 0 chr17 40500264 40500365 -49004188 + FLAM_A SINE Alu 12 112 -30 2208 113 0 0 chr17 40500402 40500703 -49003850 - AluSx SINE Alu -11 301 1 306 315 50 20 chr17 40500793 40500993 -49003560 + L2 LINE L2 2856 3061 -211 2206 122 0 0 chr17 40501065 40501369 -49003184 + AluSx SINE Alu 1 304 -8 2295 87 0 10 chr17 40501519 40501818 -49002735 - AluY SINE Alu -15 296 1 899 198 0 0 chr17 40501827 40501984 -49002569 - FRAM SINE Alu -12 164 8 450 294 20 44 chr17 40502066 40502080 -49002473 - L1MC5 LINE L1 -204 7757 7744 1872 126 21 0 chr17 40502080 40502366 -49002187 + AluSx SINE Alu 1 292 -20 450 294 20 44 chr17 40502366 40502555 -49001998 - L1MC5 LINE L1 -217 7744 7559 497 216 14 58 chr17 40502559 40502698 -49001855 - FLAM_A SINE Alu 0 133 1 231 36 0 0 chr17 40502700 40502728 -49001825 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1051 9 0 0 chr17 40502728 40502844 -49001709 - L1PA5 LINE L1 -12 6142 6027 234 0 0 0 chr17 40502844 40502870 -49001683 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 814 143 0 0 chr17 40502872 40502991 -49001562 - FLAM_C SINE Alu -24 119 1 439 266 108 37 chr17 40502993 40503234 -49001319 - L1MC5 LINE L1 -393 7568 7311 189 291 63 70 chr17 40503317 40503394 -49001159 - MIR SINE MIR -41 221 145 2176 110 7 3 chr17 40503394 40503702 -49000851 + AluSx SINE Alu 1 309 -3 189 291 63 70 chr17 40503702 40503782 -49000771 - MIR SINE MIR -117 145 65 605 227 76 91 chr17 40505301 40505536 -48999017 - L2 LINE L2 -1 3312 3079 1930 110 48 7 chr17 40505536 40505833 -48998720 - AluSq SINE Alu 0 308 1 605 227 76 91 chr17 40505833 40505860 -48998693 - L2 LINE L2 -234 3079 3053 1874 149 3 3 chr17 40505862 40506150 -48998403 + AluJb SINE Alu 2 289 -23 1648 230 120 29 chr17 40506206 40506341 -48998212 - L2 LINE L2 -385 2929 2808 2187 117 7 0 chr17 40506341 40506648 -48997905 - AluSx SINE Alu -1 311 3 1648 230 120 29 chr17 40506648 40507029 -48997524 - L2 LINE L2 -506 2808 2366 926 220 43 56 chr17 40507830 40508134 -48996419 + L1ME2 LINE L1 5856 6155 -9 2235 122 0 0 chr17 40508138 40508450 -48996103 - AluSq SINE Alu -1 312 1 1602 171 0 4 chr17 40508485 40508742 -48995811 - AluJb SINE Alu -23 289 34 2027 137 0 0 chr17 40508770 40509062 -48995491 - AluSx SINE Alu -20 292 1 1992 112 21 14 chr17 40509079 40509366 -48995187 + AluSg SINE Alu 1 289 -21 2396 84 0 3 chr17 40509761 40510072 -48994481 - AluSg SINE Alu 0 310 1 392 66 0 16 chr17 40510124 40510185 -48994368 + (CA)n Simple_repeat Simple_repeat 2 61 0 332 345 29 24 chr17 40510508 40510714 -48993839 + L2 LINE L2 2041 2247 -1067 204 232 256 24 chr17 40510837 40510962 -48993591 + L2 LINE L2 2318 2471 -843 376 218 127 9 chr17 40511057 40511167 -48993386 - L2 LINE L2 0 3313 3191 240 377 55 14 chr17 40511443 40511589 -48992964 + L2 LINE L2 3121 3272 0 470 209 47 0 chr17 40511732 40511818 -48992735 + AluJ/FLAM SINE Alu 1 90 -222 959 114 0 0 chr17 40511820 40511951 -48992602 + AluSg SINE Alu 1 131 -179 2358 67 7 0 chr17 40511972 40512270 -48992283 + AluSp SINE Alu 1 300 -13 310 270 214 0 chr17 40512337 40512463 -48992090 - MIR3 SINE MIR -1 207 55 339 278 139 0 chr17 40512468 40512583 -48991970 + MIR SINE MIR 132 262 0 262 333 167 0 chr17 40512723 40512963 -48991590 + L2 LINE L2 1813 2092 -1222 1219 91 0 18 chr17 40513205 40513370 -48991183 - AluSg/x SINE Alu -17 295 134 2165 94 10 7 chr17 40513370 40513668 -48990885 - AluSg1 SINE Alu -10 299 1 263 305 53 63 chr17 40513668 40514021 -48990532 + L2 LINE L2 2924 3272 0 2274 93 3 0 chr17 40514087 40514397 -48990156 + AluY SINE Alu 1 311 0 375 253 88 7 chr17 40514490 40514634 -48989919 - MIR3 SINE MIR 0 208 39 397 247 110 32 chr17 40515189 40515343 -48989210 - MIR SINE MIR -75 187 22 24 53 0 0 chr17 40515793 40515831 -48988722 + GC_rich Low_complexity Low_complexity 1 38 0 375 274 124 20 chr17 40516023 40516176 -48988377 - MIR SINE MIR -17 245 77 490 320 13 7 chr17 40516508 40516661 -48987892 + MIR SINE MIR 43 196 -66 21 0 0 0 chr17 40517404 40517425 -48987128 + GC_rich Low_complexity Low_complexity 1 21 0 363 292 153 14 chr17 40518046 40518190 -48986363 + L2 LINE L2 3109 3272 0 341 189 39 31 chr17 40518577 40518704 -48985849 + (CGGG)n Simple_repeat Simple_repeat 3 130 0 286 172 0 23 chr17 40518889 40518976 -48985577 + GA-rich Low_complexity Low_complexity 2 86 0 230 111 0 79 chr17 40518992 40519055 -48985498 + (CCCCCG)n Simple_repeat Simple_repeat 3 60 0 47 33 0 0 chr17 40519193 40519254 -48985299 + GC_rich Low_complexity Low_complexity 1 61 0 377 256 44 15 chr17 40520695 40520832 -48983721 - L1MC5 LINE L1 -36 7925 7785 644 288 120 54 chr17 40521558 40521926 -48982627 - L2 LINE L2 0 3313 2922 203 236 255 19 chr17 40521937 40521990 -48982563 - L2 LINE L2 -73 3199 3160 1023 208 19 33 chr17 40521990 40522056 -48982497 - MER3 DNA MER1_type 0 209 144 2087 113 7 10 chr17 40522056 40522366 -48982187 + AluSx SINE Alu 1 309 -3 1023 208 19 33 chr17 40522366 40522511 -48982042 - MER3 DNA MER1_type -65 144 1 203 236 255 19 chr17 40522511 40522614 -48981939 - L2 LINE L2 -112 3160 3006 315 359 73 9 chr17 40523082 40523302 -48981251 - L2 LINE L2 -34 3238 3005 531 278 41 46 chr17 40523312 40523506 -48981047 - MIR SINE MIR 0 262 70 234 312 50 78 chr17 40523850 40524132 -48980421 - L2 LINE L2 -571 2743 2470 735 197 0 8 chr17 40524147 40524279 -48980274 - MER94 DNA DNA 0 134 4 255 274 73 61 chr17 40524509 40524673 -48979880 - L2 LINE L2 -1335 1979 1814 205 333 71 42 chr17 40524948 40525116 -48979437 + MIR3 SINE MIR 9 181 -27 730 236 28 6 chr17 40527545 40527723 -48976830 - MIR SINE MIR -65 197 16 2290 92 0 16 chr17 40527897 40528211 -48976342 + AluSq SINE Alu 1 309 -4 270 372 71 10 chr17 40528402 40528598 -48975955 - L2 LINE L2 -194 3078 2871 264 100 0 0 chr17 40529207 40529247 -48975306 + (TCC)n Simple_repeat Simple_repeat 2 41 0 294 269 90 64 chr17 40529488 40529732 -48974821 - MIR SINE MIR -4 258 20 314 152 35 44 chr17 40531513 40531534 -48973019 + 7SLRNA srpRNA srpRNA 232 252 -68 2427 64 0 0 chr17 40531534 40531830 -48972723 + AluSq SINE Alu 1 296 -17 314 152 35 44 chr17 40531830 40531923 -48972630 + 7SLRNA srpRNA srpRNA 252 314 -6 285 278 165 9 chr17 40531990 40532105 -48972448 - MIR SINE MIR -58 150 18 223 203 0 34 chr17 40533730 40533789 -48970764 + C-rich Low_complexity Low_complexity 3 59 0 377 291 198 17 chr17 40534321 40534558 -48969995 - L2 LINE L2 -2 3311 3032 253 246 31 0 chr17 40534653 40534718 -48969835 + MIR SINE MIR 32 98 -110 568 326 79 9 chr17 40534729 40534956 -48969597 - MIR SINE MIR 0 262 20 264 277 27 54 chr17 40534915 40535027 -48969526 + MIR SINE MIR 50 158 -104 * 210 250 0 68 chr17 40535374 40535462 -48969091 + C-rich Low_complexity Low_complexity 5 86 0 1801 144 36 13 chr17 40536662 40536967 -48967586 + AluJb SINE Alu 1 312 0 300 345 90 28 chr17 40537033 40537184 -48967369 + L1MC4a LINE L1 6071 6236 -1572 2396 80 0 0 chr17 40537184 40537483 -48967070 - AluSq SINE Alu -13 300 2 300 345 90 28 chr17 40537483 40537508 -48967045 + L1MC4a LINE L1 6236 6258 -1550 1381 93 6 0 chr17 40537515 40537724 -48966829 + AluSg/x SINE Alu 98 307 0 219 88 0 0 chr17 40538298 40538332 -48966221 + (CAG)n Simple_repeat Simple_repeat 3 36 0 411 83 0 0 chr17 40539788 40539848 -48964705 + (TG)n Simple_repeat Simple_repeat 2 61 0 220 208 0 0 chr17 40540537 40540590 -48963963 + T-rich Low_complexity Low_complexity 2 54 0 2232 92 27 0 chr17 40540962 40541257 -48963296 + AluSx SINE Alu 1 303 -9 213 243 18 36 chr17 40543720 40543831 -48960722 + (CGGG)n Simple_repeat Simple_repeat 3 111 0 237 181 56 14 chr17 40543855 40543927 -48960626 + (CCCCAG)n Simple_repeat Simple_repeat 1 75 0 1010 74 0 0 chr17 40545241 40545362 -48959191 - 5S rRNA rRNA 0 121 1 210 188 213 75 chr17 40545776 40545794 -48958759 + MIR SINE MIR 39 53 -155 1427 151 38 38 chr17 40545794 40546085 -48958468 + AluJb SINE Alu 1 291 -21 210 188 213 75 chr17 40546085 40546146 -48958407 + MIR SINE MIR 53 129 -79 182 308 266 7 chr17 40546147 40546290 -48958263 - L3 LINE CR1 -103 1474 1295 291 28 0 0 chr17 40546380 40546416 -48958137 + (CA)n Simple_repeat Simple_repeat 2 37 0 223 250 19 0 chr17 40546585 40546637 -48957916 - MIR SINE MIR -207 55 3 26 0 0 0 chr17 40548518 40548544 -48956009 + AT_rich Low_complexity Low_complexity 1 26 0 324 156 0 248 chr17 40549934 40549994 -48954559 - MER5B DNA MER1_type -3 175 102 2515 58 0 0 chr17 40549994 40550304 -48954249 + AluY SINE Alu 1 310 -1 324 156 0 248 chr17 40550304 40550316 -48954237 - MER5B DNA MER1_type -76 102 89 1709 116 89 20 chr17 40550316 40550609 -48953944 + AluSp SINE Alu 1 313 0 324 156 0 248 chr17 40550609 40550622 -48953931 - MER5B DNA MER1_type -89 89 133 1821 159 27 0 chr17 40550622 40550918 -48953635 + AluSq SINE Alu 1 304 -9 324 156 0 248 chr17 40550918 40550971 -48953582 - MER5B DNA MER1_type -44 134 70 285 246 297 22 chr17 40551013 40551072 -48953481 + MER5A DNA MER1_type 8 50 -139 2351 76 3 3 chr17 40551072 40551375 -48953178 + AluSg SINE Alu 1 303 -7 285 246 297 22 chr17 40551375 40551453 -48953100 + MER5A DNA MER1_type 50 183 -6 2399 82 0 0 chr17 40553919 40554222 -48950331 + AluY SINE Alu 1 303 -8 912 150 0 96 chr17 40554547 40554734 -48949819 + AluJb SINE Alu 136 304 -8 1865 131 27 20 chr17 40556534 40556832 -48947721 - AluSx SINE Alu -12 300 1 2289 110 0 0 chr17 40557785 40558095 -48946458 - AluSx SINE Alu 0 312 3 483 255 96 64 chr17 40558331 40558374 -48946179 - MIR3 SINE MIR -14 194 154 1971 128 7 13 chr17 40558374 40558502 -48946051 + AluSg1 SINE Alu 1 128 -181 2251 81 0 7 chr17 40558502 40558798 -48945755 + AluSc SINE Alu 11 304 -5 1971 128 7 13 chr17 40558798 40558974 -48945579 + AluSg1 SINE Alu 128 303 -6 483 255 96 64 chr17 40558974 40559118 -48945435 - MIR3 SINE MIR -54 154 1 27 62 0 0 chr17 40561005 40561053 -48943500 + GC_rich Low_complexity Low_complexity 1 48 0 223 89 0 44 chr17 40561663 40561708 -48942845 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 223 68 0 45 chr17 40561788 40561832 -48942721 + (GGGGA)n Simple_repeat Simple_repeat 2 43 0 196 286 82 61 chr17 40563958 40564056 -48940497 - L2 LINE L2 -27 3245 3146 191 53 0 79 chr17 40565176 40565214 -48939339 + (A)n Simple_repeat Simple_repeat 1 35 0 698 13 0 0 chr17 40565219 40565296 -48939257 - tRNA-Asn-AAC tRNA tRNA 0 77 1 220 278 0 0 chr17 40565719 40565773 -48938780 - L2 LINE L2 -6 3307 3254 213 242 129 0 chr17 40565780 40565842 -48938711 + L2 LINE L2 3244 3313 0 2252 110 0 0 chr17 40566921 40567220 -48937333 - AluSx SINE Alu -13 299 1 2204 122 0 0 chr17 40567629 40567941 -48936612 + AluSx SINE Alu 1 312 0 278 245 113 28 chr17 40568163 40568269 -48936284 + MIR3 SINE MIR 93 207 -1 1465 160 51 8 chr17 40568456 40568712 -48935841 - AluJo SINE Alu -45 267 1 550 100 110 70 chr17 40568723 40568805 -48935748 - U6 snRNA snRNA -3 104 27 2286 64 3 14 chr17 40568805 40569101 -48935452 + AluY SINE Alu 1 293 -18 216 0 0 0 chr17 40569101 40569125 -48935428 + (TA)n Simple_repeat Simple_repeat 2 25 0 306 0 0 0 chr17 40569124 40569158 -48935395 + (TG)n Simple_repeat Simple_repeat 1 34 0 550 100 110 70 chr17 40569125 40569174 -48935379 - U6 snRNA snRNA -79 28 1 2089 127 10 0 chr17 40569935 40570234 -48934319 - AluSx SINE Alu -10 302 1 1707 126 43 47 chr17 40570320 40570621 -48933932 - AluSx SINE Alu -11 301 2 2134 122 3 0 chr17 40570679 40570974 -48933579 + AluSx SINE Alu 2 297 -15 1736 101 0 0 chr17 40570976 40571204 -48933349 + AluSc SINE Alu 1 228 -81 1372 116 11 0 chr17 40571206 40571395 -48933158 - AluSq SINE Alu -122 191 1 1793 154 13 16 chr17 40571775 40572086 -48932467 - AluJo SINE Alu -2 310 1 2177 75 7 0 chr17 40572206 40572508 -48932045 + AluY SINE Alu 1 304 0 1389 197 45 3 chr17 40572648 40572938 -48931615 - Tigger5 DNA MER2_type -2019 304 3 2436 70 0 10 chr17 40572974 40573288 -48931265 - AluY SINE Alu 0 311 1 364 295 50 14 chr17 40574370 40574509 -48930044 + MIR SINE MIR 40 183 -79 2254 77 13 7 chr17 40574509 40574808 -48929745 + AluSp SINE Alu 1 301 -12 251 267 67 19 chr17 40575412 40575517 -48929036 - L2 LINE L2 -917 2397 2288 * 308 255 49 64 chr17 40575492 40575653 -48928900 - MIR SINE MIR -7 201 42 2170 108 13 3 chr17 40576516 40576822 -48927731 + AluSx SINE Alu 1 309 -3 2405 69 0 7 chr17 40576939 40577243 -48927310 - AluSg SINE Alu -8 302 1 366 326 154 0 chr17 40577820 40577995 -48926558 - MIR SINE MIR -12 250 49 442 289 74 0 chr17 40578111 40578260 -48926293 - MER5B DNA MER1_type -1 177 18 693 162 221 0 chr17 40578308 40578462 -48926091 - MER5A DNA MER1_type -1 188 1 21 0 0 0 chr17 40578571 40578592 -48925961 + GC_rich Low_complexity Low_complexity 1 21 0 1720 166 64 0 chr17 40578657 40578940 -48925613 - AluJb SINE Alu -11 301 1 189 74 0 0 chr17 40580956 40580983 -48923570 + (CA)n Simple_repeat Simple_repeat 2 28 0 211 200 0 0 chr17 40584603 40584648 -48919905 + CT-rich Low_complexity Low_complexity 2 46 0 189 296 56 0 chr17 40584829 40584900 -48919653 - L2 LINE L2 -64 3208 3134 598 102 31 0 chr17 40584915 40585013 -48919540 + AluJb SINE Alu 207 307 -5 1816 170 0 3 chr17 40585188 40585471 -48919082 + AluJo SINE Alu 1 282 -30 230 323 21 0 chr17 40585564 40585651 -48918902 - MER112 DNA MER1_type -6 254 166 2725 155 45 23 chr17 40585651 40586031 -48918522 + Tigger7 DNA MER2_type 1 396 -2091 2207 110 10 3 chr17 40586031 40586322 -48918231 - AluSx SINE Alu -19 293 1 2725 155 45 23 chr17 40586322 40586456 -48918097 + Tigger7 DNA MER2_type 396 526 -1961 672 101 0 73 chr17 40586433 40586542 -48918011 + Tigger7 DNA MER2_type 2487 2587 0 * 339 215 224 0 chr17 40586545 40586652 -48917901 - MER112 DNA MER1_type -96 164 34 191 250 21 0 chr17 40586838 40586886 -48917667 + MIR SINE MIR 97 145 -63 2319 139 26 55 chr17 40587507 40587570 -48916983 + L1MB3 LINE L1 5684 5747 -436 1303 206 46 90 chr17 40587570 40587928 -48916625 + MLT2D LTR ERVL 1 338 -76 2597 68 0 6 chr17 40587928 40588239 -48916314 + AluY SINE Alu 1 309 -2 1303 206 46 90 chr17 40588239 40588313 -48916240 + MLT2D LTR ERVL 338 414 0 2319 139 26 55 chr17 40588313 40588382 -48916171 + L1MB3 LINE L1 5747 5817 -366 207 0 0 0 chr17 40588382 40588405 -48916148 + (TG)n Simple_repeat Simple_repeat 2 24 0 2438 61 0 14 chr17 40588405 40588694 -48915859 - AluY SINE Alu -26 285 1 1539 210 20 10 chr17 40588694 40588988 -48915565 - AluJo SINE Alu -14 298 1 2319 139 26 55 chr17 40588988 40589017 -48915536 + L1MB3 LINE L1 5815 5843 -340 2501 80 0 6 chr17 40589017 40589328 -48915225 + AluSc SINE Alu 1 309 0 2319 139 26 55 chr17 40589328 40589413 -48915140 + L1MB3 LINE L1 5843 5929 -254 2095 97 64 17 chr17 40589413 40589711 -48914842 - AluSp SINE Alu -1 312 1 2319 139 26 55 chr17 40589711 40589933 -48914620 + L1MB3 LINE L1 5929 6138 -45 1091 108 12 30 chr17 40589933 40590099 -48914454 + AluSc SINE Alu 147 309 0 928 200 6 0 chr17 40590345 40590505 -48914048 - AluJb SINE Alu -18 294 134 1827 154 4 4 chr17 40590506 40590785 -48913768 - AluJo SINE Alu -12 300 22 286 318 45 0 chr17 40591967 40592077 -48912476 - L2 LINE L2 -19 3294 3180 271 302 75 4 chr17 40594365 40594487 -48910066 + MIR SINE MIR 48 177 -31 2040 149 0 0 chr17 40594962 40595258 -48909295 - AluJb SINE Alu -16 296 1 1033 150 12 0 chr17 40595258 40595418 -48909135 - AluJo SINE Alu -4 298 137 2435 70 6 29 chr17 40596347 40596660 -48907893 + AluSq SINE Alu 1 306 -7 2256 113 3 3 chr17 40597036 40597338 -48907215 - AluSq SINE Alu -7 306 5 969 108 0 23 chr17 40597847 40597977 -48906576 - AluJo SINE Alu -185 127 1 260 282 261 7 chr17 40598001 40598143 -48906410 + MER5A DNA MER1_type 7 184 -5 273 272 12 0 chr17 40598152 40598233 -48906320 + L1ME3A LINE L1 6080 6161 -9 2309 89 6 22 chr17 40598831 40599147 -48905406 + AluSq SINE Alu 1 311 -2 1568 186 84 0 chr17 40600480 40600754 -48903799 - AluJo SINE Alu -15 297 1 224 241 19 0 chr17 40600838 40600892 -48903661 + L2 LINE L2 3010 3064 -208 2321 118 0 13 chr17 40601024 40601339 -48903214 - AluSq SINE Alu -2 311 1 211 279 0 44 chr17 40601385 40601453 -48903100 + L2 LINE L2 3206 3270 -2 2328 82 0 0 chr17 40601619 40601941 -48902612 - AluY SINE Alu 0 322 1 1726 163 13 48 chr17 40602016 40602149 -48902404 + AluJo SINE Alu 1 137 -175 1807 115 32 8 chr17 40602149 40602402 -48902151 + AluSq SINE Alu 40 298 -15 1726 163 13 48 chr17 40602402 40602581 -48901972 + AluJo SINE Alu 137 302 -10 967 204 54 37 chr17 40603295 40603574 -48900979 + L1ME2 LINE L1 5888 6330 -4 494 113 0 0 chr17 40603847 40603918 -48900635 + AluS SINE Alu 2 72 -237 2211 111 0 0 chr17 40603919 40604198 -48900355 - AluSg SINE Alu -31 279 1 315 275 9 28 chr17 40604729 40604838 -48899715 + L2 LINE L2 2714 2820 -494 2418 80 26 0 chr17 40604848 40605150 -48899403 - AluSp SINE Alu -3 310 1 181 304 89 0 chr17 40605163 40605242 -48899311 - L2 LINE L2 -5 3267 3182 2334 80 0 23 chr17 40605249 40605549 -48899004 + AluY SINE Alu 1 293 -18 1443 187 20 4 chr17 40605605 40605851 -48898702 - AluJb SINE Alu -28 284 35 335 137 41 41 chr17 40605864 40605937 -48898616 + L1MB1 LINE L1 5779 5851 -317 2422 85 0 0 chr17 40606375 40606670 -48897883 - AluSx SINE Alu -17 295 1 2461 82 3 0 chr17 40606681 40606985 -48897568 - AluSx SINE Alu -7 305 1 2022 148 0 3 chr17 40607039 40607343 -48897210 + AluJb SINE Alu 10 312 0 385 180 3 20 chr17 40607398 40607495 -48897058 + L1MB1 LINE L1 4940 5038 -1108 2141 170 54 5 chr17 40607495 40607936 -48896617 + L1MB1 LINE L1 5705 6167 -1 385 180 3 20 chr17 40607936 40607959 -48896594 + L1MB1 LINE L1 5038 5060 -1086 400 165 0 22 chr17 40607985 40608076 -48896477 + FLAM_A SINE Alu 53 141 -1 1389 127 26 98 chr17 40608077 40608259 -48896294 + L1M4 LINE L1 5021 5164 -982 2482 96 0 0 chr17 40608259 40608571 -48895982 + AluSx SINE Alu 1 312 0 1389 127 26 98 chr17 40608571 40608765 -48895788 + L1M4 LINE L1 5164 5370 -776 839 142 0 0 chr17 40608777 40608904 -48895649 + FLAM_C SINE Alu 12 138 -5 2198 137 0 0 chr17 40608910 40609216 -48895337 + AluSx SINE Alu 1 306 -6 1324 142 19 52 chr17 40609217 40609298 -48895255 + L1M4 LINE L1 5360 5442 -742 2264 116 3 0 chr17 40609298 40609601 -48894952 + AluSx SINE Alu 1 304 -8 1324 142 19 52 chr17 40609601 40609786 -48894767 + L1M4 LINE L1 5442 5617 -567 236 302 0 0 chr17 40610979 40611042 -48893511 + MIR SINE MIR 85 147 -61 203 250 75 50 chr17 40611946 40612066 -48892487 - L3 LINE CR1 -267 1310 1188 25 0 0 0 chr17 40612866 40612891 -48891662 + GC_rich Low_complexity Low_complexity 1 25 0 266 209 29 48 chr17 40612936 40613092 -48891461 + (CCCCG)n Simple_repeat Simple_repeat 1 153 0 2581 58 0 7 chr17 40614218 40614526 -48890027 - AluY SINE Alu -5 306 1 259 338 45 32 chr17 40616364 40616521 -48888032 - L3b LINE CR1 -11 1572 1414 2445 84 0 0 chr17 40616789 40617086 -48887467 + AluSx SINE Alu 1 297 -15 341 147 55 73 chr17 40617163 40617198 -48887355 + HAL1 LINE L1 1231 1265 -1242 1669 154 18 42 chr17 40617198 40617483 -48887070 + AluJo SINE Alu 2 279 -33 341 147 55 73 chr17 40617483 40617556 -48886997 + HAL1 LINE L1 1265 1337 -1170 506 293 33 87 chr17 40617559 40617829 -48886724 + HAL1 LINE L1 2035 2318 -189 1980 155 0 37 chr17 40617829 40617966 -48886587 + AluSx SINE Alu 1 142 -170 2315 81 27 3 chr17 40617966 40618262 -48886291 + AluSx SINE Alu 1 303 -9 2460 90 0 0 chr17 40618268 40618567 -48885986 + AluSp SINE Alu 3 301 -12 1980 155 0 37 chr17 40618567 40618745 -48885808 + AluSx SINE Alu 147 311 -1 506 293 33 87 chr17 40618745 40618898 -48885655 + HAL1 LINE L1 2318 2435 -72 853 161 0 0 chr17 40618929 40619053 -48885500 - FLAM_C SINE Alu -17 126 3 727 248 0 12 chr17 40619089 40619250 -48885303 - AluJo SINE Alu -27 285 127 2064 146 3 0 chr17 40619258 40619553 -48885000 - AluSx SINE Alu -16 296 1 2558 71 0 3 chr17 40620481 40620789 -48883764 + AluSx SINE Alu 1 307 -5 1795 184 3 0 chr17 40620916 40621215 -48883338 + AluJo SINE Alu 1 300 -12 2408 94 10 3 chr17 40621218 40621527 -48883026 + AluY SINE Alu 1 311 0 2359 102 3 0 chr17 40621544 40621847 -48882706 + AluSg SINE Alu 1 304 -6 1428 97 0 31 chr17 40621921 40621940 -48882613 + AluSp SINE Alu 120 138 -175 2126 134 3 0 chr17 40621940 40622238 -48882315 + AluSp SINE Alu 1 299 -14 1428 97 0 31 chr17 40622238 40622414 -48882139 + AluSp SINE Alu 138 309 -4 420 208 139 0 chr17 40622441 40622542 -48882011 + FLAM_A SINE Alu 21 135 -7 2551 66 3 0 chr17 40622587 40622891 -48881662 + AluSx SINE Alu 1 305 -7 335 325 68 0 chr17 40623742 40623859 -48880694 + L2 LINE L2 3148 3272 0 252 149 0 0 chr17 40623972 40624019 -48880534 + (TTC)n Simple_repeat Simple_repeat 2 48 0 2099 124 7 10 chr17 40624085 40624383 -48880170 + AluSx SINE Alu 7 303 -9 2227 112 0 16 chr17 40624390 40624693 -48879860 + AluSg SINE Alu 1 298 -12 2355 84 0 26 chr17 40624695 40625003 -48879550 + AluY SINE Alu 3 302 -9 2370 88 7 0 chr17 40625381 40625678 -48878875 - AluSp SINE Alu -14 299 1 1691 85 5 0 chr17 40625870 40626082 -48878471 + AluSp SINE Alu 84 296 -17 1146 92 0 114 chr17 40626417 40626601 -48877952 + AluSg/x SINE Alu 131 293 -17 2079 125 0 50 chr17 40626616 40626937 -48877616 + AluSx SINE Alu 1 305 -7 1840 166 0 0 chr17 40627008 40627285 -48877268 - AluJb SINE Alu -35 277 1 2491 81 0 0 chr17 40627293 40627602 -48876951 - AluY SINE Alu -2 309 1 460 222 0 0 chr17 40627604 40627703 -48876850 + L1MB3 LINE L1 6007 6105 -78 1255 64 19 0 chr17 40627715 40627871 -48876682 - AluYa5 SINE Alu -2 309 151 2518 58 0 19 chr17 40627900 40628209 -48876344 + AluY SINE Alu 1 303 -8 2027 110 18 4 chr17 40628721 40629013 -48875540 + AluSx SINE Alu 7 302 0 1923 142 16 26 chr17 40629684 40629993 -48874560 - AluJo SINE Alu -6 306 1 2046 130 7 3 chr17 40630130 40630423 -48874130 - AluSg SINE Alu -16 294 1 2102 137 0 3 chr17 40630500 40630800 -48873753 + AluSg SINE Alu 1 299 -11 2154 99 0 20 chr17 40630810 40630948 -48873605 + AluSx SINE Alu 1 140 -172 2187 113 0 0 chr17 40630948 40631259 -48873294 + AluSc SINE Alu 1 311 0 2154 99 0 20 chr17 40631259 40631437 -48873116 + AluSx SINE Alu 140 312 0 2337 117 0 0 chr17 40631437 40631746 -48872807 + AluSg SINE Alu 1 309 -1 2590 52 13 0 chr17 40631753 40632059 -48872494 + AluY SINE Alu 1 310 -1 1670 178 25 4 chr17 40632451 40632632 -48871921 - AluJo SINE Alu 0 314 138 1913 153 22 35 chr17 40632632 40632808 -48871745 - AluSx SINE Alu -3 309 132 2212 105 7 16 chr17 40632808 40633112 -48871441 - AluSx SINE Alu -11 301 1 2245 101 37 0 chr17 40633116 40633413 -48871140 - AluSx SINE Alu -4 308 1 1913 153 22 35 chr17 40633413 40633544 -48871009 - AluSx SINE Alu -183 129 1 1670 178 25 4 chr17 40633544 40633670 -48870883 - AluJo SINE Alu -176 138 1 186 302 0 73 chr17 40633783 40633879 -48870674 - MIR SINE MIR -95 167 79 441 313 92 26 chr17 40634037 40634264 -48870289 - MIR SINE MIR -15 247 6 2120 118 13 7 chr17 40634720 40635026 -48869527 + AluSx SINE Alu 1 308 -4 1996 111 38 3 chr17 40635220 40635509 -48869044 - AluSg SINE Alu -11 299 1 2286 105 3 0 chr17 40635509 40635803 -48868750 - AluSp SINE Alu -17 296 2 235 88 0 0 chr17 40636258 40636292 -48868261 - Alu SINE Alu -136 167 134 2290 70 49 7 chr17 40636292 40636579 -48867974 - AluY SINE Alu -12 299 1 2395 87 3 10 chr17 40636589 40636898 -48867655 - AluSg SINE Alu -3 307 1 228 227 15 0 chr17 40637101 40637167 -48867386 + (TCCG)n Simple_repeat Simple_repeat 3 69 0 * 249 291 13 0 chr17 40637123 40637202 -48867351 + CT-rich Low_complexity Low_complexity 4 83 0 859 142 30 121 chr17 40637204 40637436 -48867117 + MER20 DNA MER1_type 9 219 0 2373 70 17 0 chr17 40637846 40638145 -48866408 + AluSp SINE Alu 1 304 -9 931 145 0 21 chr17 40639373 40639386 -48865167 - FLAM_C SINE Alu -170 142 130 1818 113 79 10 chr17 40639386 40639678 -48864875 - AluSq SINE Alu -1 312 1 931 145 0 21 chr17 40639678 40639809 -48864744 - FLAM_C SINE Alu -182 130 1 472 214 31 87 chr17 40639809 40639889 -48864664 - L1M4 LINE L1 -1676 4470 4387 2012 114 0 0 chr17 40639889 40640211 -48864342 - AluSx SINE Alu 0 342 21 472 214 31 87 chr17 40640211 40640357 -48864196 - L1M4 LINE L1 -1759 4387 4255 2220 113 3 13 chr17 40640372 40640682 -48863871 + AluSq SINE Alu 3 309 -4 2493 80 3 3 chr17 40640684 40640995 -48863558 + AluSp SINE Alu 1 311 -2 1907 140 7 0 chr17 40641057 40641335 -48863218 + AluJb SINE Alu 14 293 -19 2173 108 3 7 chr17 40641338 40641624 -48862929 + AluSx SINE Alu 1 285 -27 30 0 0 0 chr17 40641625 40641655 -48862898 + AT_rich Low_complexity Low_complexity 1 30 0 878 170 0 0 chr17 40641663 40641804 -48862749 + FLAM_C SINE Alu 1 141 -2 2847 140 15 93 chr17 40641819 40641954 -48862599 + L1MB8 LINE L1 5565 5709 -469 2200 122 0 7 chr17 40641954 40642258 -48862295 - AluSx SINE Alu -10 302 1 2847 140 15 93 chr17 40642258 40642318 -48862235 + L1MB8 LINE L1 5709 5772 -406 1507 173 71 42 chr17 40642318 40642601 -48861952 + AluSx SINE Alu 1 291 -21 2847 140 15 93 chr17 40642601 40642717 -48861836 + L1MB8 LINE L1 5772 5895 -283 2173 107 3 0 chr17 40642717 40643007 -48861546 + AluY SINE Alu 11 301 -10 2847 140 15 93 chr17 40643007 40643358 -48861195 + L1MB8 LINE L1 5895 6177 -1 2434 74 0 7 chr17 40643403 40643700 -48860853 - AluSc SINE Alu -14 295 1 526 221 18 35 chr17 40643770 40643883 -48860670 - FLAM_A SINE Alu -31 111 1 273 143 0 0 chr17 40643936 40643978 -48860575 - Alu SINE Alu -259 42 1 961 185 0 19 chr17 40644012 40644169 -48860384 + FRAM SINE Alu 1 154 -22 228 250 157 19 chr17 40644199 40644307 -48860246 + MER113 DNA MER1_type? 396 518 -3 1969 147 3 23 chr17 40644321 40644628 -48859925 + AluJo SINE Alu 1 301 -11 1953 66 117 12 chr17 40644698 40644984 -48859569 - AluY SINE Alu 0 313 1 198 103 0 0 chr17 40644995 40645024 -48859529 + (TTCC)n Simple_repeat Simple_repeat 1 29 0 376 318 151 32 chr17 40645024 40645270 -48859283 - HAL1 LINE L1 -1205 1302 1087 2533 74 3 3 chr17 40645270 40645581 -48858972 - AluY SINE Alu 0 311 1 2026 114 45 0 chr17 40645583 40645872 -48858681 - AluSq SINE Alu -10 303 2 376 318 151 32 chr17 40645872 40646000 -48858553 - HAL1 LINE L1 -1420 1087 880 2466 75 13 0 chr17 40646001 40646308 -48858245 - AluY SINE Alu 0 311 1 1783 86 0 5 chr17 40646308 40646530 -48858023 - AluSg/x SINE Alu -16 296 76 2350 74 3 7 chr17 40646530 40646825 -48857728 - AluSg SINE Alu -15 295 1 572 95 0 0 chr17 40647161 40647235 -48857318 - tRNA-Cys-TGC tRNA tRNA -1 74 1 1904 92 52 15 chr17 40647419 40647691 -48856862 + AluSx SINE Alu 1 282 -30 284 187 0 27 chr17 40647708 40647783 -48856770 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 795 139 0 66 chr17 40647803 40647940 -48856613 - FLAM_C SINE Alu -14 129 2 2537 53 7 3 chr17 40647950 40648249 -48856304 - AluY SINE Alu -11 300 1 2404 83 0 3 chr17 40649355 40649655 -48854898 - AluSg SINE Alu -11 299 1 1489 188 4 0 chr17 40649772 40650011 -48854542 + AluJb SINE Alu 13 252 -60 2373 92 3 16 chr17 40650020 40650336 -48854217 - AluSx SINE Alu 0 312 1 341 191 0 29 chr17 40650336 40650404 -48854149 + AluYb8 SINE Alu 237 302 -6 2294 115 0 3 chr17 40650836 40651148 -48853405 + AluSq SINE Alu 1 311 -2 672 281 130 0 chr17 40651182 40651338 -48853215 + MIR SINE MIR 2 199 -63 2111 105 21 0 chr17 40651338 40651624 -48852929 - AluSx SINE Alu -20 292 1 672 281 130 0 chr17 40651624 40651698 -48852855 + MIR SINE MIR 199 262 0 22 35 0 0 chr17 40651735 40651764 -48852789 + AT_rich Low_complexity Low_complexity 1 29 0 1937 123 0 0 chr17 40651782 40652066 -48852487 + AluSx SINE Alu 24 307 0 1007 132 40 7 chr17 40652074 40652226 -48852327 + FRAM SINE Alu 1 157 -19 2451 102 0 3 chr17 40652244 40652557 -48851996 + AluSx SINE Alu 1 312 0 815 128 0 0 chr17 40652675 40652784 -48851769 + AluJb SINE Alu 7 115 -197 944 181 0 0 chr17 40652784 40652939 -48851614 + AluSg/x SINE Alu 156 310 0 2343 64 3 41 chr17 40652948 40653262 -48851291 + AluY SINE Alu 1 302 -9 1303 133 8 95 chr17 40653979 40654242 -48850311 + AluJb SINE Alu 40 279 -33 1209 87 12 153 chr17 40654261 40654515 -48850038 + AluY SINE Alu 93 310 -1 1427 166 90 10 chr17 40655287 40655576 -48848977 + AluJo SINE Alu 1 312 0 2504 35 11 0 chr17 40655585 40655872 -48848681 + AluY SINE Alu 1 290 -21 248 51 0 26 chr17 40655946 40655985 -48848568 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2143 97 0 4 chr17 40655987 40656265 -48848288 - AluSg1 SINE Alu -30 279 3 917 18 9 0 chr17 40656277 40656388 -48848165 + (TCTA)n Simple_repeat Simple_repeat 1 112 0 2098 124 0 0 chr17 40656388 40656670 -48847883 - AluSx SINE Alu -30 282 1 273 161 49 0 chr17 40656673 40656754 -48847799 + (TA)n Simple_repeat Simple_repeat 2 86 0 868 152 0 0 chr17 40656762 40656894 -48847659 - AluSg/x SINE Alu -47 265 134 2231 97 21 0 chr17 40656895 40657185 -48847368 - AluSx SINE Alu -16 296 1 2560 60 3 0 chr17 40657195 40657495 -48847058 - AluSp SINE Alu -12 301 1 1365 128 202 8 chr17 40657508 40657751 -48846802 - AluSg1 SINE Alu -4 305 16 954 116 0 22 chr17 40657751 40657889 -48846664 - AluSq/x SINE Alu -176 136 2 1652 198 3 0 chr17 40657925 40658223 -48846330 - AluSq SINE Alu -14 299 1 1057 150 53 0 chr17 40658355 40658542 -48846011 - AluSg/x SINE Alu -8 302 106 2428 87 0 13 chr17 40658571 40658746 -48845807 - AluSg SINE Alu -4 306 135 2445 67 0 10 chr17 40658746 40659046 -48845507 - AluY SINE Alu -14 297 1 2428 87 0 13 chr17 40659046 40659180 -48845373 - AluSg SINE Alu -175 135 1 2291 117 3 0 chr17 40659195 40659503 -48845050 - AluSq SINE Alu -1 312 4 2211 121 0 3 chr17 40659503 40659801 -48844752 - AluSq SINE Alu -16 297 1 2333 87 7 7 chr17 40659811 40660109 -48844444 - AluY SINE Alu -13 298 1 962 168 62 0 chr17 40660111 40660272 -48844281 - FRAM SINE Alu -14 162 1 260 208 0 11 chr17 40660299 40660372 -48844181 - AluSp SINE Alu -117 186 121 2374 82 6 13 chr17 40660540 40660855 -48843698 + AluSp SINE Alu 1 313 0 1127 100 0 0 chr17 40660858 40661008 -48843545 + AluSq SINE Alu 121 270 -43 1745 106 4 0 chr17 40661069 40661295 -48843258 - AluSx SINE Alu -85 227 1 608 282 35 6 chr17 40661356 40661530 -48843023 + AluJo SINE Alu 115 293 -19 1828 150 25 0 chr17 40661699 40661985 -48842568 - AluSx SINE Alu -17 295 3 518 217 101 8 chr17 40662036 40662165 -48842388 - MER5B DNA MER1_type -3 175 35 1667 130 52 26 chr17 40662824 40663094 -48841459 - AluSg SINE Alu -33 277 1 1134 155 11 6 chr17 40663341 40663515 -48841038 + AluSq SINE Alu 43 217 -96 216 0 0 0 chr17 40663685 40663709 -48840844 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 595 200 22 30 chr17 40664061 40664196 -48840357 - AluJb SINE Alu -109 203 70 1157 124 12 0 chr17 40665536 40665705 -48838848 + AluSg/x SINE Alu 130 300 -10 593 91 0 57 chr17 40665749 40665873 -48838680 + AluSg/x SINE Alu 199 317 0 2149 103 7 13 chr17 40667751 40668052 -48836501 - AluSx SINE Alu -13 299 1 565 184 22 140 chr17 40668111 40668339 -48836214 - L2 LINE L2 0 3313 3113 236 27 0 54 chr17 40668343 40668380 -48836173 + U2 snRNA snRNA 1 35 -153 2251 73 0 7 chr17 40668393 40668680 -48835873 + AluSg SINE Alu 1 285 -25 757 70 0 0 chr17 40669231 40669331 -48835222 - AluSp/q SINE Alu -1 312 213 230 51 51 0 chr17 40669337 40669376 -48835177 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 230 232 0 0 chr17 40669377 40669446 -48835107 + (TA)n Simple_repeat Simple_repeat 2 70 0 1198 145 9 53 chr17 40669464 40669600 -48834953 + AluSx SINE Alu 1 126 -186 2062 70 3 44 chr17 40669600 40669922 -48834631 + AluSp SINE Alu 1 310 0 1198 145 9 53 chr17 40669922 40670012 -48834541 + AluSx SINE Alu 126 218 -94 330 191 0 0 chr17 40670012 40670075 -48834478 + AluSq/x SINE Alu 84 146 -157 1901 125 10 14 chr17 40670075 40670364 -48834189 + AluSx SINE Alu 11 298 -14 1362 183 55 26 chr17 40670379 40670526 -48834027 + AluJo SINE Alu 3 164 -148 1937 133 0 14 chr17 40670526 40670831 -48833722 + AluSx SINE Alu 1 301 0 1362 183 55 26 chr17 40670831 40670955 -48833598 + AluJo SINE Alu 164 283 -29 1923 230 83 26 chr17 40670965 40671084 -48833469 - L2 LINE L2 -375 2939 2828 1931 121 7 14 chr17 40671084 40671366 -48833187 + AluSx SINE Alu 10 289 -23 1923 230 83 26 chr17 40671366 40671776 -48832777 - L2 LINE L2 -486 2828 2380 1998 125 10 16 chr17 40671999 40672311 -48832242 + AluSx SINE Alu 1 310 -2 2019 129 0 37 chr17 40672552 40672873 -48831680 - AluSq SINE Alu 0 310 1 2284 101 0 13 chr17 40673011 40673317 -48831236 - AluSx SINE Alu -10 302 1 813 107 149 20 chr17 40673318 40673480 -48831073 + L1MB3 LINE L1 6007 6175 -9 1995 90 83 42 chr17 40673480 40673769 -48830784 + AluSx SINE Alu 1 301 -11 813 107 149 20 chr17 40673769 40673781 -48830772 + L1MB3 LINE L1 6175 6184 0 207 173 0 39 chr17 40673804 40673856 -48830697 + A-rich Low_complexity Low_complexity 6 55 0 1956 141 0 10 chr17 40673868 40674159 -48830394 + AluSq SINE Alu 6 293 -20 966 144 0 13 chr17 40674163 40674316 -48830237 + FRAM SINE Alu 15 165 -11 834 103 0 26 chr17 40674328 40674445 -48830108 + AluJ SINE Alu 13 126 -186 358 322 0 0 chr17 40674448 40674538 -48830015 + L1MC4 LINE L1 6614 6703 -1339 319 208 0 0 chr17 40674545 40674598 -48829955 - L1MC4 LINE L1 -1340 6702 6650 1240 173 0 5 chr17 40674609 40674800 -48829753 + AluJ SINE Alu 111 300 -12 1297 155 77 35 chr17 40675033 40675406 -48829147 - MLT1J LTR MaLR -26 485 40 2022 141 13 0 chr17 40675406 40675705 -48828848 + AluSx SINE Alu 1 303 -9 1297 155 77 35 chr17 40675705 40675742 -48828811 - MLT1J LTR MaLR -471 40 6 2507 64 0 22 chr17 40676210 40676521 -48828032 - AluY SINE Alu -7 304 1 2240 125 3 0 chr17 40676551 40676856 -48827697 - AluSx SINE Alu -3 309 4 806 86 18 0 chr17 40676870 40676993 -48827560 + L1MC/D LINE L1 5468 5592 -586 362 168 0 15 chr17 40677004 40677078 -48827475 - AluJb SINE Alu -176 126 67 1075 147 6 0 chr17 40677087 40677244 -48827309 - FRAM SINE Alu -8 158 1 914 204 63 53 chr17 40677368 40677424 -48827129 - Charlie1b DNA MER1_type -2397 364 310 1440 178 87 8 chr17 40677424 40677688 -48826865 + AluJb SINE Alu 1 285 -17 564 81 54 0 chr17 40677614 40677689 -48826864 + AluJb SINE Alu 208 306 0 * 181 0 0 0 chr17 40677689 40677709 -48826844 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 914 204 63 53 chr17 40677709 40677968 -48826585 - Charlie1b DNA MER1_type -2450 311 44 2330 52 0 45 chr17 40677989 40678299 -48826254 + AluY SINE Alu 1 296 -15 2212 107 7 0 chr17 40678315 40678606 -48825947 + AluSx SINE Alu 1 293 -19 593 54 0 14 chr17 40678876 40678950 -48825603 - tRNA-Cys-TGC tRNA tRNA -2 73 1 2011 92 3 19 chr17 40679228 40679542 -48825011 - AluY SINE Alu -2 309 1 2336 60 7 0 chr17 40679777 40680078 -48824475 - AluSp SINE Alu -10 303 1 183 308 8 90 chr17 40680088 40680132 -48824421 + L2 LINE L2 3159 3205 -108 1969 120 24 0 chr17 40680132 40680424 -48824129 - AluSx SINE Alu -13 299 1 183 308 8 90 chr17 40680424 40680512 -48824041 + L2 LINE L2 3205 3280 -33 509 340 127 0 chr17 40680515 40680783 -48823770 + L2 LINE L2 1089 1390 -1924 2215 91 3 3 chr17 40680784 40681092 -48823461 - AluY SINE Alu -3 308 1 2111 131 0 3 chr17 40681272 40681584 -48822969 - AluSq SINE Alu -1 312 2 2085 129 3 0 chr17 40681585 40681896 -48822657 - AluSx SINE Alu 0 312 1 2311 172 15 77 chr17 40681939 40682360 -48822193 + MLT1D LTR MaLR 1 384 -121 2215 108 0 0 chr17 40682360 40682656 -48821897 - AluSg SINE Alu -14 296 1 2311 172 15 77 chr17 40682656 40682770 -48821783 + MLT1D LTR MaLR 384 503 -2 244 238 0 48 chr17 40682773 40682836 -48821717 + L2 LINE L2 2576 2635 -679 1595 167 89 11 chr17 40682837 40683119 -48821434 - AluJb SINE Alu -7 305 2 1686 138 56 0 chr17 40683121 40683425 -48821128 - L1MB1 LINE L1 -35 6133 5813 319 58 0 186 chr17 40683427 40683513 -48821040 - AluSp/q SINE Alu 0 303 234 2051 113 3 0 chr17 40683625 40683907 -48820646 + AluSp SINE Alu 1 283 -30 207 0 0 0 chr17 40683968 40683991 -48820562 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1983 90 55 17 chr17 40684001 40684291 -48820262 + AluSg SINE Alu 1 301 -9 1930 82 0 79 chr17 40684364 40684682 -48819871 - AluSg SINE Alu -17 293 1 629 41 0 0 chr17 40684832 40684905 -48819648 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 957 123 159 0 chr17 40685807 40685970 -48818583 + MER5A DNA MER1_type 1 189 0 210 71 0 0 chr17 40686372 40686400 -48818153 + (T)n Simple_repeat Simple_repeat 1 28 0 645 27 0 0 chr17 40686478 40686551 -48818002 - tRNA-Cys-TGC tRNA tRNA -2 73 1 242 268 171 12 chr17 40689270 40689389 -48815164 + MIR SINE MIR 33 170 -63 268 164 0 33 chr17 40690200 40690261 -48814292 - L2 LINE L2 0 3313 3255 23 33 0 0 chr17 40690718 40690748 -48813805 + AT_rich Low_complexity Low_complexity 1 30 0 315 0 0 0 chr17 40692244 40692279 -48812274 + (TG)n Simple_repeat Simple_repeat 1 35 0 1281 116 0 0 chr17 40693358 40693530 -48811023 - AluSg/x SINE Alu -4 308 137 297 0 0 0 chr17 40693531 40693564 -48810989 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1995 112 0 11 chr17 40693564 40693851 -48810702 - AluSx SINE Alu -28 284 1 1989 56 116 4 chr17 40693921 40694189 -48810364 - AluY SINE Alu -13 298 1 393 314 58 12 chr17 40694335 40694507 -48810046 - MIR SINE MIR -19 243 64 205 235 39 0 chr17 40695494 40695545 -48809008 - MIR SINE MIR -72 190 138 259 341 71 0 chr17 40695582 40695708 -48808845 - MIR SINE MIR -125 137 3 261 75 0 0 chr17 40696146 40696186 -48808367 + (CATCC)n Simple_repeat Simple_repeat 3 42 0 2023 116 16 13 chr17 40696333 40696644 -48807909 - AluSx SINE Alu 0 312 1 27 29 0 0 chr17 40696652 40696686 -48807867 + AT_rich Low_complexity Low_complexity 1 34 0 229 286 0 78 chr17 40696950 40697027 -48807526 - L2 LINE L2 -2 3270 3200 1965 125 17 7 chr17 40698011 40698325 -48806228 + AluSx SINE Alu 1 312 0 219 308 0 0 chr17 40698354 40698406 -48806147 - L2 LINE L2 -11 3261 3210 1063 132 23 87 chr17 40698433 40698652 -48805901 - AluJb SINE Alu 0 312 108 2236 84 20 0 chr17 40699436 40699733 -48804820 - AluSx SINE Alu -9 303 1 1647 159 69 3 chr17 40700303 40700593 -48803960 + AluJb SINE Alu 1 309 -3 238 180 33 49 chr17 40700802 40700863 -48803690 - MIR3 SINE MIR -33 175 116 186 43 0 0 chr17 40700927 40700950 -48803603 + (T)n Simple_repeat Simple_repeat 1 23 0 2290 85 3 13 chr17 40701560 40701876 -48802677 - AluSq SINE Alu 0 313 1 2045 105 0 0 chr17 40701876 40702152 -48802401 - AluSx SINE Alu -9 303 27 300 293 49 24 chr17 40702407 40702530 -48802023 + MIR SINE MIR 89 214 -48 527 108 10 0 chr17 40703269 40703371 -48801182 + (TC)n Simple_repeat Simple_repeat 1 103 0 786 180 7 0 chr17 40704082 40704221 -48800332 - FLAM_C SINE Alu -3 140 1 227 215 77 0 chr17 40704868 40704933 -48799620 - MIR SINE MIR -80 128 59 2097 123 10 0 chr17 40705472 40705765 -48798788 - AluSx SINE Alu -16 296 1 369 260 96 51 chr17 40705769 40705946 -48798607 - L2 LINE L2 0 3313 3129 264 177 48 16 chr17 40705962 40706024 -48798529 + MIR3 SINE MIR 124 187 -21 503 287 122 16 chr17 40706097 40706285 -48798268 + MIR SINE MIR 12 219 -43 2158 100 0 3 chr17 40706300 40706617 -48797936 - AluSg SINE Alu 0 316 1 2037 125 87 12 chr17 40706637 40706972 -48797581 + MER46B DNA MER2_type 2 236 0 183 80 0 0 chr17 40708380 40708405 -48796148 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 428 248 51 22 chr17 40708623 40708760 -48795793 - MIR SINE MIR -54 208 68 231 337 79 0 chr17 40708790 40708891 -48795662 - MIR SINE MIR -48 214 106 1662 185 20 0 chr17 40709000 40709298 -48795255 + AluJo SINE Alu 1 304 -8 360 0 0 0 chr17 40709739 40709779 -48794774 + (CA)n Simple_repeat Simple_repeat 2 41 0 279 203 0 0 chr17 40710138 40710197 -48794356 + (TG)n Simple_repeat Simple_repeat 1 59 0 482 322 78 24 chr17 40710197 40710402 -48794151 - MIR SINE MIR -30 232 17 465 237 69 40 chr17 40710432 40710605 -48793948 - MER5A DNA MER1_type -5 184 7 213 327 25 66 chr17 40710785 40710912 -48793641 + MIR SINE MIR 45 166 -62 571 289 129 0 chr17 40711585 40711786 -48792767 + MIR SINE MIR 36 262 0 2037 133 0 10 chr17 40711917 40712225 -48792328 - AluJb SINE Alu -7 305 1 765 124 31 23 chr17 40712356 40712485 -48792068 - FLAM_C SINE Alu -1 142 13 1911 92 38 20 chr17 40712509 40712802 -48791751 - AluSx SINE Alu -13 299 2 332 253 228 6 chr17 40713457 40713615 -48790938 - MIR3 SINE MIR -11 197 5 347 248 24 2 chr17 40713903 40714017 -48790536 - MIR SINE MIR -62 146 38 183 288 14 41 chr17 40714738 40714811 -48789742 - L3b LINE CR1 -163 1420 1350 483 299 13 57 chr17 40715157 40715423 -48789130 + MIR SINE MIR 5 262 0 259 248 25 83 chr17 40716791 40716912 -48787641 + MER112 DNA MER1_type 3 116 -144 1993 88 70 18 chr17 40716933 40717217 -48787336 - AluSx SINE Alu -13 299 1 1611 159 7 66 chr17 40717290 40717579 -48786974 + AluJo SINE Alu 23 294 -18 2366 84 0 0 chr17 40717580 40717877 -48786676 + AluSc SINE Alu 1 297 -12 514 316 6 18 chr17 40718695 40718866 -48785687 + MER5A DNA MER1_type 19 187 -2 2342 75 0 7 chr17 40718948 40719254 -48785299 - AluY SINE Alu -7 304 1 1773 168 3 0 chr17 40719256 40719548 -48785005 - AluJo SINE Alu -19 293 1 744 109 78 55 chr17 40719567 40719695 -48784858 - FLAM_C SINE Alu 0 133 3 2215 115 0 6 chr17 40719876 40720190 -48784363 - AluSx SINE Alu 0 312 1 302 250 42 0 chr17 40720441 40720513 -48784040 + MIR SINE MIR 109 183 -79 1276 180 35 100 chr17 40720564 40720875 -48783678 - AluJo SINE Alu -19 293 3 400 221 90 151 chr17 40721343 40721498 -48783055 - LTR37B LTR ERV1 0 468 305 2314 113 0 0 chr17 40721498 40721809 -48782744 + AluSx SINE Alu 1 311 -1 400 221 90 151 chr17 40721809 40722151 -48782402 - LTR37B LTR ERV1 -163 305 1 266 231 181 31 chr17 40722151 40722433 -48782120 - L1MC3 LINE L1 -267 5903 5665 2074 102 7 20 chr17 40722433 40722738 -48781815 + AluY SINE Alu 1 301 -10 266 231 181 31 chr17 40722738 40722933 -48781620 - L1MC3 LINE L1 -505 5665 5392 1848 143 3 13 chr17 40722966 40723267 -48781286 + AluJo SINE Alu 5 302 -10 244 281 266 31 chr17 40723290 40723433 -48781120 + MIR SINE MIR 2 110 -152 1830 149 7 17 chr17 40723433 40723761 -48780792 + AluSx SINE Alu 1 312 0 244 281 266 31 chr17 40723761 40723809 -48780744 + MIR SINE MIR 110 238 -24 226 261 148 0 chr17 40724491 40724579 -48779974 + MER94 DNA DNA 1 101 -33 252 217 87 0 chr17 40724682 40724751 -48779802 + MIR SINE MIR 79 153 -109 366 271 34 17 chr17 40725037 40725155 -48779398 - MIR3 SINE MIR -7 201 82 2254 96 0 3 chr17 40726513 40726815 -48777738 + AluSg SINE Alu 1 301 -9 302 0 0 26 chr17 40726910 40726949 -48777604 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 1923 150 7 0 chr17 40726949 40727235 -48777318 - AluSx SINE Alu -21 291 1 1504 209 49 61 chr17 40727400 40727745 -48776808 - MER58B DNA MER1_type 0 341 1 477 264 61 31 chr17 40727758 40727921 -48776632 - MER5A DNA MER1_type -5 184 17 2127 111 0 0 chr17 40727921 40728210 -48776343 - AluSx SINE Alu -23 289 1 193 317 168 19 chr17 40728337 40728498 -48776055 - L2 LINE L2 -94 3178 2994 298 309 143 12 chr17 40728541 40728702 -48775851 + MIR SINE MIR 46 227 -35 2047 111 0 26 chr17 40728975 40729281 -48775272 - AluSx SINE Alu -14 298 1 203 145 40 105 chr17 40729571 40729647 -48774906 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 304 311 62 25 chr17 40730665 40730826 -48773727 + MIR SINE MIR 84 250 -12 2224 92 3 3 chr17 40730907 40731210 -48773343 + AluSx SINE Alu 1 303 -9 414 268 65 0 chr17 40731253 40731376 -48773177 - MIR SINE MIR -56 206 76 360 94 0 0 chr17 40731861 40731914 -48772639 + (CA)n Simple_repeat Simple_repeat 2 54 0 637 279 228 13 chr17 40733269 40733465 -48771088 - L2 LINE L2 -49 3264 3111 2005 102 17 24 chr17 40733465 40733760 -48770793 + AluSx SINE Alu 1 293 -19 2162 109 3 3 chr17 40733767 40734071 -48770482 + AluSq SINE Alu 1 304 -9 637 279 228 13 chr17 40734071 40734438 -48770115 - L2 LINE L2 -206 3107 2555 210 171 0 0 chr17 40734576 40734611 -48769942 + T-rich Low_complexity Low_complexity 1 35 0 1753 141 3 61 chr17 40734862 40735066 -48769487 - AluJo SINE Alu -4 308 129 1919 112 32 4 chr17 40735066 40735344 -48769209 + AluSx SINE Alu 14 299 -13 1753 141 3 61 chr17 40735344 40735466 -48769087 - AluJo SINE Alu -183 129 1 195 42 0 0 chr17 40738372 40738396 -48766157 + (GGCTG)n Simple_repeat Simple_repeat 3 26 0 186 103 0 0 chr17 40738743 40738772 -48765781 + (TG)n Simple_repeat Simple_repeat 1 29 0 232 145 16 32 chr17 40738989 40739051 -48765502 + (TG)n Simple_repeat Simple_repeat 2 62 0 207 0 0 0 chr17 40739069 40739092 -48765461 + (TG)n Simple_repeat Simple_repeat 2 24 0 229 305 171 2 chr17 40739667 40739820 -48764733 - MIR3 SINE MIR -69 139 2 1587 61 0 0 chr17 40740638 40740834 -48763719 + AluY SINE Alu 85 280 -31 414 0 0 0 chr17 40740837 40740883 -48763670 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 995 105 0 0 chr17 40741032 40741165 -48763388 + FLAM_C SINE Alu 1 133 0 259 297 14 14 chr17 40741324 40741398 -48763155 + MIR SINE MIR 2 75 -187 2187 98 3 0 chr17 40741417 40741703 -48762850 - AluSp SINE Alu -26 287 1 1124 133 0 11 chr17 40741709 40741890 -48762663 - AluSg/x SINE Alu 0 312 134 2148 86 38 0 chr17 40741890 40742180 -48762373 - AluSg1 SINE Alu -8 301 1 180 111 0 0 chr17 40743090 40743117 -48761436 + (A)n Simple_repeat Simple_repeat 1 27 0 375 23 0 0 chr17 40744283 40744327 -48760226 + (TG)n Simple_repeat Simple_repeat 2 45 0 2141 119 0 0 chr17 40744516 40744827 -48759726 + AluSx SINE Alu 1 311 -1 2152 113 3 0 chr17 40744948 40745258 -48759295 + AluSx SINE Alu 1 311 -1 735 190 0 7 chr17 40745352 40745494 -48759059 + FLAM_C SINE Alu 2 142 -1 2062 125 0 10 chr17 40746685 40746998 -48757555 - AluSq SINE Alu -3 310 1 183 170 0 0 chr17 40747145 40747192 -48757361 + T-rich Low_complexity Low_complexity 1 47 0 6688 57 3 80 chr17 40747193 40748458 -48756095 - SVA Other Other -723 1386 432 1947 108 4 7 chr17 40748665 40748967 -48755586 + AluSx SINE Alu 9 312 0 1822 127 3 56 chr17 40748971 40749295 -48755258 + AluSg SINE Alu 1 307 -3 1817 134 21 3 chr17 40749305 40749589 -48754964 + AluSx SINE Alu 1 289 -23 23 33 0 0 chr17 40749812 40749842 -48754711 + AT_rich Low_complexity Low_complexity 1 30 0 2161 68 3 55 chr17 40751066 40751375 -48753178 - AluSg SINE Alu -16 294 2 1981 131 0 7 chr17 40752117 40752414 -48752139 + AluSx SINE Alu 2 296 -16 884 160 7 0 chr17 40753363 40753536 -48751017 - FRAM SINE Alu 0 175 2 240 235 0 0 chr17 40753758 40753809 -48750744 + (TA)n Simple_repeat Simple_repeat 2 52 0 29 0 0 0 chr17 40754528 40754557 -48749996 + AT_rich Low_complexity Low_complexity 1 29 0 1744 109 0 0 chr17 40754557 40754795 -48749758 - AluSx SINE Alu -25 287 50 2279 78 0 3 chr17 40754849 40755155 -48749398 - AluY SINE Alu -6 305 1 430 274 17 20 chr17 40755247 40755394 -48749159 + MIR SINE MIR 31 175 -62 21 36 0 0 chr17 40755394 40755422 -48749131 + AT_rich Low_complexity Low_complexity 1 28 0 2205 100 3 0 chr17 40756199 40756510 -48748043 + AluSx SINE Alu 1 312 0 213 39 0 0 chr17 40756511 40756537 -48748016 + (TA)n Simple_repeat Simple_repeat 2 27 0 348 272 228 22 chr17 40756576 40756712 -48747841 - L2 LINE L2 0 3272 3109 2838 13 0 0 chr17 40756836 40757154 -48747399 - AluYb8 SINE Alu 0 318 1 245 326 45 103 chr17 40757270 40757512 -48747041 - L2 LINE L2 -15 3257 3030 * 470 349 35 42 chr17 40757511 40757795 -48746758 + L2 LINE L2 2643 2924 -390 1589 189 0 10 chr17 40757870 40758166 -48746387 - AluJo SINE Alu -19 293 1 1058 180 4 69 chr17 40758180 40758348 -48746205 - AluJo SINE Alu -20 292 143 2066 126 7 0 chr17 40758348 40758657 -48745896 - AluSx SINE Alu -1 311 1 1058 180 4 69 chr17 40758657 40758733 -48745820 - AluJo SINE Alu -169 143 64 222 139 0 47 chr17 40758747 40758790 -48745763 + L2 LINE L2 3269 3309 -4 338 250 0 57 chr17 40758793 40758881 -48745672 + L1MC4 LINE L1 6646 6728 -1314 1654 156 7 14 chr17 40758881 40759163 -48745390 - AluJb SINE Alu -32 280 1 463 153 118 118 chr17 40759181 40759351 -48745202 - L1MC5 LINE L1 -30 7931 7762 1979 110 7 4 chr17 40759500 40759807 -48744746 + AluSg SINE Alu 1 308 0 29 28 0 0 chr17 40760548 40760584 -48743969 + AT_rich Low_complexity Low_complexity 1 36 0 2004 96 36 0 chr17 40761097 40761377 -48743176 + AluSx SINE Alu 1 290 -22 393 22 0 0 chr17 40761379 40761425 -48743128 + (TG)n Simple_repeat Simple_repeat 1 46 0 618 216 0 0 chr17 40761432 40761543 -48743010 + AluJo/FLAM SINE Alu 2 112 -200 1258 95 0 22 chr17 40761543 40761608 -48742945 + AluSc SINE Alu 70 135 -174 2362 73 3 0 chr17 40761608 40761909 -48742644 + AluY SINE Alu 1 302 -9 1258 95 0 22 chr17 40761909 40762022 -48742531 + AluSc SINE Alu 135 244 -65 228 135 0 0 chr17 40762022 40762059 -48742494 + (TG)n Simple_repeat Simple_repeat 2 38 0 889 131 0 0 chr17 40762707 40762837 -48741716 + AluSq/x SINE Alu 4 133 -179 2311 71 0 0 chr17 40762842 40763137 -48741416 + AluY SINE Alu 1 295 -16 378 132 0 0 chr17 40763137 40763213 -48741340 + (TA)n Simple_repeat Simple_repeat 1 76 0 311 252 53 46 chr17 40763217 40763348 -48741205 - L1MCa LINE L1 -4362 2064 1933 * 351 318 0 14 chr17 40763252 40763399 -48741154 + L1MC4 LINE L1 6613 6703 -1339 318 243 0 14 chr17 40763354 40763424 -48741129 - L1MCa LINE L1 -4362 2064 1996 * 314 278 22 33 chr17 40763382 40763454 -48741099 + L1MC4 LINE L1 6613 6685 -1357 * 917 110 0 11 chr17 40763454 40763636 -48740917 + (TA)n Simple_repeat Simple_repeat 1 180 0 314 278 22 33 chr17 40763636 40763653 -48740900 + L1MC4 LINE L1 6685 6701 -1341 * 334 258 0 43 chr17 40763644 40763737 -48740816 + L1MC4 LINE L1 6613 6701 -1341 385 274 79 0 chr17 40763756 40763948 -48740605 + L1MC4 LINE L1 6550 6646 -1139 329 215 46 0 chr17 40763903 40763968 -48740585 - L1MCa LINE L1 -4363 2063 1996 * 346 284 43 23 chr17 40763958 40764099 -48740454 + L1MC4 LINE L1 6613 6703 -1339 * 363 190 0 66 chr17 40764091 40764188 -48740365 - L1MC4 LINE L1 -1337 6985 1996 314 284 23 23 chr17 40764159 40764247 -48740306 + L1MC4 LINE L1 6616 6703 -1339 * 355 298 35 0 chr17 40764218 40764334 -48740219 + L1MC4 LINE L1 6613 6703 -1339 386 120 27 93 chr17 40764250 40764325 -48740228 - L1MCa LINE L1 -4362 2064 1995 943 162 0 23 chr17 40764335 40764508 -48740045 + AluSg/x SINE Alu 135 303 -9 1430 143 83 30 chr17 40764529 40764794 -48739759 - AluJo SINE Alu -31 281 3 2236 95 0 7 chr17 40764815 40765120 -48739433 + AluY SINE Alu 1 303 -8 1831 148 5 56 chr17 40765140 40765395 -48739158 - L1MB8 LINE L1 0 6178 5948 2149 104 3 7 chr17 40765395 40765702 -48738851 - AluSx SINE Alu -6 306 1 1831 148 5 56 chr17 40765702 40765837 -48738716 - L1MB8 LINE L1 -230 5948 5808 1094 53 29 100 chr17 40765842 40765942 -48738611 - L1PA11 LINE L1 -21 6153 6068 1181 92 0 6 chr17 40765942 40766106 -48738447 - L1PA7 LINE L1 0 6154 5992 1094 53 29 100 chr17 40766106 40766175 -48738378 - L1PA11 LINE L1 -106 6068 5996 * 2029 152 25 52 chr17 40766174 40766322 -48738231 - L1MB8 LINE L1 -352 5832 5681 1849 154 0 13 chr17 40766322 40766665 -48737888 + AluJb SINE Alu 1 312 0 2029 152 25 52 chr17 40766665 40766918 -48737635 - L1MB8 LINE L1 -503 5681 5442 811 210 25 6 chr17 40766925 40767082 -48737471 - AluJ SINE Alu -15 297 138 520 102 0 23 chr17 40767093 40767181 -48737372 - L1MB8 LINE L1 0 6178 6093 2088 148 14 0 chr17 40767189 40767541 -48737012 - L1MB4 LINE L1 0 6180 5824 383 129 14 29 chr17 40767568 40767638 -48736915 - Alu SINE Alu 0 301 233 904 134 0 8 chr17 40767653 40767787 -48736766 - FLAM_C SINE Alu 0 133 1 1406 192 48 0 chr17 40768087 40768378 -48736175 - AluJo SINE Alu -7 305 1 1771 168 7 0 chr17 40768383 40768681 -48735872 - AluJb SINE Alu -12 300 1 1991 123 14 0 chr17 40768938 40769230 -48735323 + AluSq SINE Alu 3 298 -15 1822 146 13 0 chr17 40769232 40769533 -48735020 + AluY SINE Alu 1 305 -6 325 182 0 0 chr17 40769708 40769763 -48734790 - Alu SINE Alu -7 293 239 835 150 0 0 chr17 40770008 40770141 -48734412 - AluSq/x SINE Alu -180 133 1 2045 120 3 7 chr17 40770182 40770313 -48734240 + AluSx SINE Alu 1 131 -181 378 0 0 0 chr17 40770313 40770355 -48734198 + (CA)n Simple_repeat Simple_repeat 1 42 0 2045 120 3 7 chr17 40770355 40770523 -48734030 + AluSx SINE Alu 131 299 -13 2153 112 0 0 chr17 40770530 40770825 -48733728 + AluSx SINE Alu 1 295 -17 445 164 16 131 chr17 40771149 40771199 -48733354 + MIR SINE MIR 154 185 -77 2128 93 0 17 chr17 40771199 40771522 -48733031 + AluSx SINE Alu 2 319 0 445 164 16 131 chr17 40771522 40771592 -48732961 + MIR SINE MIR 185 261 -1 2259 84 0 3 chr17 40772293 40772590 -48731963 + AluY SINE Alu 1 296 -15 1309 130 20 0 chr17 40772632 40772832 -48731721 - AluSg/x SINE Alu -13 297 94 2310 78 0 0 chr17 40772881 40773174 -48731379 + AluSg SINE Alu 17 309 -1 1229 92 0 0 chr17 40773174 40773337 -48731216 + AluY SINE Alu 133 295 -16 2154 123 0 0 chr17 40773493 40773801 -48730752 + AluSq SINE Alu 1 308 -5 1272 146 75 37 chr17 40774880 40775022 -48729531 - AluJo SINE Alu -6 306 171 2164 95 10 0 chr17 40775022 40775316 -48729237 - AluSc SINE Alu -12 297 1 1272 146 75 37 chr17 40775316 40775441 -48729112 - AluJo SINE Alu -141 171 29 488 189 0 11 chr17 40776177 40776267 -48728286 - AluJo SINE Alu -99 213 125 2133 123 10 0 chr17 40776488 40776796 -48727757 + AluSx SINE Alu 1 311 -1 303 28 0 0 chr17 40776812 40776848 -48727705 + (TG)n Simple_repeat Simple_repeat 1 36 0 681 192 16 0 chr17 40776852 40776977 -48727576 - AluJ SINE Alu -29 283 157 1028 118 0 7 chr17 40777142 40777294 -48727259 - AluJ SINE Alu -161 151 1 702 192 8 0 chr17 40777340 40777465 -48727088 + FLAM_A SINE Alu 1 126 -7 2242 119 0 0 chr17 40777809 40778119 -48726434 - AluSx SINE Alu -2 310 1 180 111 0 0 chr17 40779326 40779353 -48725200 + (CAT)n Simple_repeat Simple_repeat 2 28 0 1925 109 36 0 chr17 40779521 40779841 -48724712 + AluSp SINE Alu 1 330 0 2129 111 3 0 chr17 40780367 40780664 -48723889 - AluSx SINE Alu -14 298 1 278 135 0 0 chr17 40780833 40780870 -48723683 + Alu SINE Alu 1 37 -262 1657 145 16 45 chr17 40780941 40781288 -48723265 - AluJo SINE Alu 0 312 8 1367 122 126 16 chr17 40781365 40781501 -48723052 + AluSg1 SINE Alu 1 121 -184 1641 120 0 0 chr17 40781501 40781735 -48722818 + AluSx SINE Alu 1 234 -78 1367 122 126 16 chr17 40781735 40781875 -48722678 + AluSg1 SINE Alu 121 305 0 1896 92 0 113 chr17 40782009 40782337 -48722216 - AluSx SINE Alu -11 291 1 2092 79 3 33 chr17 40782780 40783085 -48721468 + AluY SINE Alu 1 296 -15 395 270 107 46 chr17 40783156 40783352 -48721201 - L1ME4a LINE L1 -149 5972 5765 2087 88 0 3 chr17 40783391 40783688 -48720865 - AluSg SINE Alu -14 296 1 25 31 0 0 chr17 40783858 40783890 -48720663 + AT_rich Low_complexity Low_complexity 1 32 0 817 66 0 0 chr17 40785129 40785235 -48719318 + FLAM_C SINE Alu 6 111 -32 180 77 0 0 chr17 40785388 40785414 -48719139 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 602 316 56 28 chr17 40785417 40785740 -48718813 - L2 LINE L2 -15 3298 2967 446 187 0 0 chr17 40785905 40785980 -48718573 - AluS SINE Alu -237 76 2 1649 140 74 0 chr17 40785981 40786266 -48718287 - AluSx SINE Alu -6 306 1 2143 107 0 10 chr17 40786292 40786602 -48717951 - AluSx SINE Alu -5 307 1 835 239 161 53 chr17 40786716 40787071 -48717482 - L2 LINE L2 -526 2788 2396 789 236 28 11 chr17 40787094 40787109 -48717444 - AluJo/FRAM SINE Alu 0 312 299 2298 87 10 0 chr17 40787109 40787419 -48717134 - AluSp SINE Alu 0 313 1 789 236 28 11 chr17 40787419 40787581 -48716972 - AluJo/FRAM SINE Alu -13 299 132 572 250 214 67 chr17 40787612 40788000 -48716553 - L2 LINE L2 -958 2356 1912 332 162 54 153 chr17 40788523 40788592 -48715961 + MER69A DNA AcHobo 1 57 -2469 2249 95 0 0 chr17 40788592 40788888 -48715665 - AluSx SINE Alu -16 296 1 332 162 54 153 chr17 40788888 40788929 -48715624 + MER69A DNA AcHobo 57 100 -77 1579 166 29 0 chr17 40789245 40789523 -48715030 - AluJo SINE Alu -18 294 9 386 240 94 0 chr17 40789574 40789670 -48714883 + MER5A DNA MER1_type 8 112 -77 2036 103 3 0 chr17 40790158 40790468 -48714085 - AluSp SINE Alu 0 311 1 190 175 70 140 chr17 40790586 40790608 -48713945 - L3b LINE CR1 -113 1470 1448 2100 121 0 16 chr17 40790608 40790921 -48713632 + AluSx SINE Alu 1 308 -4 190 175 70 140 chr17 40790921 40790955 -48713598 - L3b LINE CR1 -135 1448 1418 1797 145 0 11 chr17 40790983 40791266 -48713287 - AluSx SINE Alu -32 280 1 1687 154 33 26 chr17 40791294 40791415 -48713138 + AluJo SINE Alu 1 120 -192 234 0 0 0 chr17 40791415 40791441 -48713112 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1687 154 33 26 chr17 40791441 40791624 -48712929 + AluJo SINE Alu 120 307 -5 236 200 50 33 chr17 40791711 40791771 -48712782 - L1ME4a LINE L1 -85 6036 5976 282 246 51 72 chr17 40791819 40791910 -48712643 - L1ME4a LINE L1 -299 5822 5733 2103 112 0 0 chr17 40791910 40792206 -48712347 - AluSx SINE Alu -6 306 11 282 246 51 72 chr17 40792206 40792252 -48712301 - L1ME4a LINE L1 -388 5733 5688 23 0 0 0 chr17 40792279 40792302 -48712251 + AT_rich Low_complexity Low_complexity 1 23 0 207 100 0 0 chr17 40792423 40792453 -48712100 + (CAT)n Simple_repeat Simple_repeat 2 31 0 1368 126 61 82 chr17 40792494 40792788 -48711765 - AluSx SINE Alu -24 288 1 2344 52 0 0 chr17 40792797 40793087 -48711466 - AluY SINE Alu -21 290 1 1292 125 90 39 chr17 40793090 40793191 -48711362 + L1MB3 LINE L1 5913 6007 -176 2085 117 3 3 chr17 40793191 40793490 -48711063 - AluSx SINE Alu -13 299 1 1292 125 90 39 chr17 40793490 40793644 -48710909 + L1MB3 LINE L1 6007 6181 -2 1858 90 83 42 chr17 40793653 40793942 -48710611 + AluSx SINE Alu 1 301 -11 207 173 0 39 chr17 40793977 40794029 -48710524 + A-rich Low_complexity Low_complexity 6 55 0 1814 141 0 10 chr17 40794041 40794332 -48710221 + AluSq SINE Alu 6 293 -20 892 144 0 13 chr17 40794336 40794489 -48710064 + FRAM SINE Alu 15 165 -11 794 111 0 26 chr17 40794501 40794618 -48709935 + AluJ SINE Alu 13 126 -186 390 272 0 45 chr17 40794629 40794763 -48709790 - L1MC4 LINE L1 -1339 6703 6614 380 303 0 0 chr17 40794766 40794855 -48709698 + L1MC4 LINE L1 6615 6703 -1339 189 0 0 0 chr17 40794856 40794877 -48709676 + (TG)n Simple_repeat Simple_repeat 2 22 0 315 152 0 0 chr17 40794877 40794923 -48709630 - L1MC4 LINE L1 -1339 6703 6658 1142 173 0 5 chr17 40794938 40795129 -48709424 + AluJ SINE Alu 111 300 -12 1382 153 77 35 chr17 40795362 40795735 -48708818 - MLT1J LTR MaLR -26 485 40 1876 141 13 0 chr17 40795735 40796034 -48708519 + AluSx SINE Alu 1 303 -9 1382 153 77 35 chr17 40796034 40796071 -48708482 - MLT1J LTR MaLR -471 40 6 2361 64 0 22 chr17 40796539 40796850 -48707703 - AluY SINE Alu -7 304 1 2255 101 3 0 chr17 40796880 40797187 -48707366 - AluSx SINE Alu -3 309 2 259 114 0 0 chr17 40797306 40797341 -48707212 - Alu SINE Alu -265 36 2 1385 126 105 4 chr17 40797352 40797591 -48706962 + AluJb SINE Alu 49 311 -1 277 258 16 0 chr17 40797745 40797807 -48706746 - MIR SINE MIR -57 151 89 292 274 45 62 chr17 40797943 40798122 -48706431 + L1ME4a LINE L1 5944 6119 -2 2140 108 0 10 chr17 40798395 40798702 -48705851 - AluSx SINE Alu -5 307 4 850 86 18 0 chr17 40798716 40798839 -48705714 + L1MC/D LINE L1 5468 5592 -586 384 168 0 15 chr17 40798850 40798924 -48705629 - AluJb SINE Alu -176 126 67 1008 146 6 0 chr17 40798933 40799091 -48705462 - FRAM SINE Alu -18 158 1 3549 88 45 18 chr17 40799092 40799606 -48704947 + L1MC1 LINE L1 5577 6104 -229 2082 102 0 3 chr17 40799607 40799922 -48704631 + AluSx SINE Alu 1 314 0 1268 79 6 6 chr17 40799922 40800099 -48704454 + AluSq SINE Alu 133 309 -4 23 0 0 0 chr17 40800101 40800124 -48704429 + AT_rich Low_complexity Low_complexity 1 23 0 308 289 56 0 chr17 40800576 40800666 -48703887 - MIR3 SINE MIR -23 185 91 2097 122 3 0 chr17 40800696 40801000 -48703553 + AluSx SINE Alu 1 305 -7 755 189 18 53 chr17 40801010 40801200 -48703353 + FAM SINE Alu 1 175 0 879 194 0 6 chr17 40801256 40801416 -48703137 - AluJb SINE Alu -18 294 136 2034 123 0 7 chr17 40801502 40801803 -48702750 - AluSx SINE Alu -9 303 5 1897 161 0 0 chr17 40802373 40802683 -48701870 - AluSx SINE Alu -2 310 1 1712 157 7 17 chr17 40803094 40803387 -48701166 + AluJb SINE Alu 1 290 -22 2087 113 10 0 chr17 40803721 40804014 -48700539 + AluSx SINE Alu 1 296 -16 1557 187 7 17 chr17 40804038 40804337 -48700216 + AluJo SINE Alu 1 296 -16 2043 107 0 46 chr17 40804338 40804664 -48699889 + AluSx SINE Alu 1 311 -1 3646 146 48 91 chr17 40804805 40804854 -48699699 - L1MB3 LINE L1 -3 6180 6130 2399 69 0 0 chr17 40804854 40805157 -48699396 - AluSg SINE Alu -7 303 1 3646 146 48 91 chr17 40805157 40805691 -48698862 - L1MB3 LINE L1 -53 6130 5575 2192 73 0 48 chr17 40805691 40806006 -48698547 - AluSq SINE Alu -13 300 1 3646 146 48 91 chr17 40806006 40806053 -48698500 - L1MB3 LINE L1 -608 5575 5528 2243 93 7 7 chr17 40806053 40806363 -48698190 - AluSq SINE Alu -3 310 1 3646 146 48 91 chr17 40806363 40806622 -48697931 - L1MB3 LINE L1 -655 5528 5259 1887 110 43 3 chr17 40806622 40806904 -48697649 - AluSq SINE Alu -20 293 1 2352 47 0 13 chr17 40806911 40807209 -48697344 - AluY SINE Alu -17 294 1 3646 146 48 91 chr17 40807209 40807424 -48697129 - L1MB3 LINE L1 -930 5253 5030 1876 152 0 3 chr17 40807424 40807720 -48696833 - AluJb SINE Alu -17 295 1 3646 146 48 91 chr17 40807720 40807904 -48696649 - L1MB3 LINE L1 -1153 5030 5009 2336 84 0 0 chr17 40807904 40808213 -48696340 - AluSg SINE Alu -1 309 1 3646 146 48 91 chr17 40808213 40808445 -48696108 - L1MB3 LINE L1 -1174 5009 4769 1535 133 155 47 chr17 40808649 40808941 -48695612 + MSTA LTR MaLR 60 392 -36 2298 93 3 0 chr17 40808941 40809251 -48695302 - AluSq SINE Alu -2 311 1 1535 133 155 47 chr17 40809251 40809280 -48695273 + MSTA LTR MaLR 392 416 -12 776 291 75 14 chr17 40809284 40809673 -48694880 - L1ME3A LINE L1 -311 5928 5522 2332 70 3 0 chr17 40809673 40809974 -48694579 - AluSx SINE Alu -10 302 1 776 291 75 14 chr17 40809974 40810010 -48694543 - L1ME3A LINE L1 -717 5522 5490 1448 179 19 4 chr17 40810021 40810283 -48694270 - AluJo SINE Alu -46 266 1 299 218 91 36 chr17 40810289 40810454 -48694099 - L1ME3A LINE L1 -733 5500 5327 1235 172 0 20 chr17 40810513 40810571 -48693982 - MER20 DNA MER1_type -1 218 160 336 94 0 0 chr17 40810571 40810624 -48693929 + (TG)n Simple_repeat Simple_repeat 2 54 0 1235 172 0 20 chr17 40810624 40810769 -48693784 - MER20 DNA MER1_type -59 160 19 1945 125 10 22 chr17 40810809 40811120 -48693433 + AluSx SINE Alu 5 311 -1 1310 274 78 14 chr17 40811124 40811791 -48692762 - L1ME3A LINE L1 -1053 5162 4453 2211 87 0 7 chr17 40811804 40812102 -48692451 - AluSx SINE Alu -16 296 1 788 168 0 0 chr17 40812118 40812243 -48692310 - FLAM_C SINE Alu -7 126 2 507 327 50 79 chr17 40812331 40812372 -48692181 - L1ME3A LINE L1 -3980 2416 2375 1470 205 7 13 chr17 40812372 40812674 -48691879 - AluJo SINE Alu -11 301 2 507 327 50 79 chr17 40812674 40812752 -48691801 - L1ME3A LINE L1 -4021 2375 2296 2076 96 0 0 chr17 40812752 40813023 -48691530 - AluSx SINE Alu -30 282 12 507 327 50 79 chr17 40813023 40813058 -48691495 - L1ME3A LINE L1 -4100 2296 2262 360 0 0 0 chr17 40813058 40813098 -48691455 + (TG)n Simple_repeat Simple_repeat 2 41 0 507 327 50 79 chr17 40813098 40813458 -48691095 - L1ME3A LINE L1 -4134 2262 1915 479 261 86 60 chr17 40814181 40814362 -48690191 - L1ME LINE L1 -873 1568 1393 2177 109 10 6 chr17 40814362 40814674 -48689879 - AluSq SINE Alu 0 313 1 479 261 86 60 chr17 40814674 40814868 -48689685 - L1ME LINE L1 -1048 1393 1165 180 77 0 0 chr17 40814877 40814903 -48689650 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 1825 137 11 0 chr17 40814903 40815188 -48689365 - AluJo SINE Alu -11 301 14 1082 266 99 70 chr17 40815229 40815479 -48689074 - L1ME LINE L1 -5051 1019 778 2204 103 0 7 chr17 40815479 40815789 -48688764 - AluSc SINE Alu -1 308 1 1082 266 99 70 chr17 40815789 40816062 -48688491 - L1ME LINE L1 -5292 778 514 1918 119 0 51 chr17 40816062 40816396 -48688157 - AluSq SINE Alu 0 313 1 1082 266 99 70 chr17 40816396 40816505 -48688048 - L1ME LINE L1 -5556 514 410 2404 81 0 0 chr17 40816505 40816813 -48687740 - AluY SINE Alu -3 308 1 1082 266 99 70 chr17 40816813 40817217 -48687336 - L1ME LINE L1 -5660 410 1 1054 122 10 51 chr17 40818033 40818230 -48686323 - AluSg/x SINE Alu -2 308 120 2116 107 13 7 chr17 40818232 40818541 -48686012 - AluSx SINE Alu -1 311 1 1948 144 13 0 chr17 40818647 40818952 -48685601 - AluJb SINE Alu -3 309 1 804 280 143 42 chr17 40819000 40819553 -48685000 + L2 LINE L2 2145 2753 -561 343 277 90 112 chr17 40819593 40820005 -48684548 + L2 LINE L2 2843 3245 -27 218 411 0 0 chr17 40820002 40820075 -48684478 + MIR SINE MIR 52 124 -138 * 564 300 162 48 chr17 40820171 40820943 -48683610 + L2 LINE L2 1497 2396 -918 2171 116 0 6 chr17 40820943 40821254 -48683299 + AluSx SINE Alu 1 309 -3 564 300 162 48 chr17 40821254 40821417 -48683136 + L2 LINE L2 2396 2539 -775 271 253 40 0 chr17 40821524 40821599 -48682954 + CT-rich Low_complexity Low_complexity 4 81 0 360 47 0 0 chr17 40821599 40821642 -48682911 - L2 LINE L2 -9 3304 3262 2129 99 10 0 chr17 40822120 40822414 -48682139 + AluSx SINE Alu 2 298 -14 2045 99 0 23 chr17 40822973 40823275 -48681278 - AluSx SINE Alu -17 295 1 1678 152 20 26 chr17 40823297 40823599 -48680954 - AluJb SINE Alu -12 300 1 243 79 0 0 chr17 40823800 40823838 -48680715 + (CA)n Simple_repeat Simple_repeat 2 39 0 423 0 0 0 chr17 40824071 40824118 -48680435 + (CA)n Simple_repeat Simple_repeat 1 47 0 429 141 0 0 chr17 40824187 40824258 -48680295 + (TTCCC)n Simple_repeat Simple_repeat 1 71 0 1964 79 45 0 chr17 40824258 40824523 -48680030 - AluSp SINE Alu -22 291 15 314 222 28 0 chr17 40824823 40824895 -48679658 + L1MC5 LINE L1 7702 7775 -186 1017 78 0 42 chr17 40824906 40825048 -48679505 + AluSq/x SINE Alu 1 136 -176 2104 87 45 0 chr17 40825048 40825336 -48679217 + AluSq SINE Alu 1 301 -12 284 252 50 25 chr17 40825338 40825457 -48679096 + L1MC5 LINE L1 7789 7910 -51 445 304 101 42 chr17 40825483 40825700 -48678853 + MIR SINE MIR 18 247 -15 2007 219 13 5 chr17 40825752 40826144 -48678409 + MSTD LTR MaLR 2 396 0 1419 178 17 34 chr17 40826274 40826572 -48677981 - AluJo SINE Alu -19 293 1 772 246 99 16 chr17 40827411 40827663 -48676890 + L3 LINE CR1 1278 1550 -27 322 292 0 31 chr17 40827687 40827783 -48676770 + MIR SINE MIR 23 115 -93 24 0 0 0 chr17 40827825 40827849 -48676704 + AT_rich Low_complexity Low_complexity 1 24 0 2266 81 0 3 chr17 40827849 40828144 -48676409 + AluY SINE Alu 1 294 -17 1596 98 29 36 chr17 40828236 40828392 -48676161 - L1MA2 LINE L1 -3 6301 6146 1952 164 13 0 chr17 40828392 40828697 -48675856 - AluJb SINE Alu -3 309 1 1596 98 29 36 chr17 40828697 40828817 -48675736 - L1MA2 LINE L1 -158 6146 6027 1827 207 110 78 chr17 40828817 40829536 -48675017 + LTR1B LTR ERV1 1 742 -84 956 77 32 26 chr17 40829665 40829821 -48674732 - L1MA3 LINE L1 -276 6029 5873 258 298 165 13 chr17 40829827 40829857 -48674696 + MIR SINE MIR 74 98 -164 2281 157 0 3 chr17 40829857 40830195 -48674358 - MER1B DNA MER1_type 0 337 1 258 298 165 13 chr17 40830195 40830322 -48674231 + MIR SINE MIR 98 255 -7 2308 116 0 3 chr17 40830323 40830626 -48673927 + AluSx SINE Alu 1 302 -10 1252 199 60 38 chr17 40830649 40830746 -48673807 - MER33 DNA MER1_type -2261 324 231 2225 114 0 3 chr17 40830746 40831043 -48673510 - AluSx SINE Alu -12 300 5 1252 199 60 38 chr17 40831043 40831262 -48673291 - MER33 DNA MER1_type -2354 231 1 798 142 191 11 chr17 40831321 40831360 -48673193 + MER21A LTR ERV1 1 32 -899 4399 116 14 41 chr17 40831360 40832067 -48672486 + LTR8 LTR ERV1 1 688 -3 798 142 191 11 chr17 40832067 40832210 -48672343 + MER21A LTR ERV1 32 216 -715 776 187 6 60 chr17 40832227 40832263 -48672290 + MER21B LTR ERV1 279 315 -548 1899 169 0 3 chr17 40832263 40832564 -48671989 + AluJb SINE Alu 1 300 -12 776 187 6 60 chr17 40832564 40832693 -48671860 + MER21B LTR ERV1 315 435 -428 893 251 124 60 chr17 40832895 40833057 -48671496 - LTR1B LTR ERV1 -213 613 463 2349 99 0 0 chr17 40833057 40833351 -48671202 + AluSx SINE Alu 1 294 -18 893 251 124 60 chr17 40833351 40833734 -48670819 - LTR1B LTR ERV1 -363 463 33 * 2578 114 28 2 chr17 40833728 40834123 -48670430 + MER21A LTR ERV1 517 921 -10 2322 108 3 0 chr17 40834225 40834532 -48670021 - AluSq SINE Alu 0 313 6 198 270 48 16 chr17 40834729 40834792 -48669761 + MIR SINE MIR 198 262 0 209 228 35 18 chr17 40834862 40834919 -48669634 + MIR SINE MIR 88 145 -63 457 84 28 0 chr17 40834955 40835026 -48669527 - MADE1 DNA Mariner -1 79 7 2320 101 0 9 chr17 40835042 40835358 -48669195 - AluSq SINE Alu 0 313 1 4894 106 47 0 chr17 40836261 40837005 -48667548 + Tigger1 DNA MER2_type 735 1513 -905 2308 96 0 3 chr17 40837010 40837303 -48667250 + AluSc SINE Alu 5 296 -13 3919 108 16 23 chr17 40837303 40837480 -48667073 + Tigger1 DNA MER2_type 1629 1806 -612 2465 86 0 0 chr17 40837480 40837783 -48666770 - AluSq SINE Alu -10 303 1 3919 108 16 23 chr17 40837783 40838224 -48666329 + Tigger1 DNA MER2_type 1806 2243 -175 1795 161 40 6 chr17 40838224 40838546 -48666007 + LTR28 LTR ERV1 1 333 -687 2373 101 3 0 chr17 40838686 40838983 -48665570 + AluSg SINE Alu 1 298 -12 219 36 0 0 chr17 40839347 40839375 -48665178 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2414 57 10 24 chr17 40839619 40839915 -48664638 - AluY SINE Alu -19 292 1 1130 116 0 0 chr17 40840062 40840217 -48664336 + AluSc SINE Alu 150 304 -5 932 110 110 0 chr17 40840917 40841053 -48663500 - AluSg SINE Alu -159 151 1 2295 104 0 3 chr17 40841086 40841393 -48663160 - AluSq SINE Alu -1 312 7 2166 128 0 0 chr17 40842091 40842387 -48662166 - AluSx SINE Alu -16 296 1 432 311 59 70 chr17 40842633 40843382 -48661171 + L1MEc LINE L1 237 2410 -937 418 302 89 22 chr17 40843387 40843612 -48660941 + L1MEc LINE L1 2390 2629 -3517 2066 139 7 0 chr17 40843760 40844047 -48660506 + AluSx SINE Alu 7 295 -17 242 302 160 0 chr17 40844047 40844153 -48660400 + MER5A DNA MER1_type 66 188 -1 1715 193 13 0 chr17 40844462 40844762 -48659791 - AluJo SINE Alu -8 304 1 4070 93 22 5 chr17 40845212 40845861 -48658692 + L1PB1 LINE L1 5223 5881 -270 24 0 0 0 chr17 40847324 40847348 -48657205 + AT_rich Low_complexity Low_complexity 1 24 0 783 149 0 0 chr17 40847350 40847464 -48657089 - FRAM SINE Alu -62 114 1 580 225 8 0 chr17 40848458 40848587 -48655966 + Zaphod DNA AcHobo 3877 4006 -25 307 111 0 0 chr17 40849220 40849265 -48655288 - MLT1K LTR MaLR -6 582 538 1409 211 28 7 chr17 40850212 40850497 -48654056 - AluSq SINE Alu -22 291 1 1398 189 7 60 chr17 40850528 40850830 -48653723 - AluSg SINE Alu -24 286 1 216 0 0 0 chr17 40850839 40850863 -48653690 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 2753 181 61 93 chr17 40850872 40851706 -48652847 + SVA Other Other 62 868 -518 1774 122 88 27 chr17 40851917 40852211 -48652342 - AluJb SINE Alu 0 312 1 265 57 0 0 chr17 40852492 40852527 -48652026 + Alu SINE Alu 255 289 -13 2239 104 10 3 chr17 40853122 40853419 -48651134 - AluSx SINE Alu -13 299 1 894 226 94 13 chr17 40853602 40853837 -48650716 - MER87 LTR ERV1 0 541 288 1010 266 12 4 chr17 40854644 40854888 -48649665 + MIR SINE MIR 16 261 -1 267 219 105 48 chr17 40854918 40855006 -48649547 + L2 LINE L2 3138 3234 -38 2404 92 0 0 chr17 40855006 40855309 -48649244 + AluSx SINE Alu 1 303 -9 267 219 105 48 chr17 40855309 40855325 -48649228 + L2 LINE L2 3234 3248 -24 239 266 80 35 chr17 40855455 40855568 -48648985 - MIR3 SINE MIR -52 156 39 1451 176 44 44 chr17 40856318 40856457 -48648096 - AluJb SINE Alu -40 272 131 2132 126 13 10 chr17 40856457 40856759 -48647794 - AluSx SINE Alu -9 303 1 1451 176 44 44 chr17 40856759 40856891 -48647662 - AluJb SINE Alu -180 132 1 310 185 0 0 chr17 40856893 40856947 -48647606 + MER3 DNA MER1_type 155 208 -1 279 221 29 114 chr17 40856975 40857069 -48647484 - L1MC4a LINE L1 -1893 5915 5835 2361 105 0 0 chr17 40857069 40857365 -48647188 - AluSp SINE Alu -17 296 1 279 221 29 114 chr17 40857365 40857410 -48647143 - L1MC4a LINE L1 -1973 5835 5788 1700 170 14 24 chr17 40857875 40858169 -48646384 + AluJo SINE Alu 1 291 -21 446 0 19 0 chr17 40858303 40858357 -48646196 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 354 228 24 24 chr17 40858386 40858509 -48646044 - L1ME3A LINE L1 -208 5962 5840 446 146 109 0 chr17 40858535 40858645 -48645908 + Charlie5 DNA MER1_type 2 123 -2489 719 138 76 131 chr17 40858647 40858753 -48645800 + Charlie5 DNA MER1_type 2234 2344 -241 1863 164 3 3 chr17 40858753 40859046 -48645507 - AluJb SINE Alu -9 303 11 719 138 76 131 chr17 40859046 40859439 -48645114 + Charlie5 DNA MER1_type 2344 2579 -6 447 268 23 42 chr17 40859526 40859723 -48644830 - L1ME3A LINE L1 -348 5836 5645 2191 105 10 7 chr17 40860393 40860698 -48643855 + AluSx SINE Alu 3 308 -4 381 324 118 49 chr17 40860755 40860959 -48643594 + L1MC/D LINE L1 5281 5498 -623 24 0 0 0 chr17 40861759 40861783 -48642770 + AT_rich Low_complexity Low_complexity 1 24 0 1690 185 99 143 chr17 40862095 40862410 -48642143 + LTR8 LTR ERV1 1 329 -362 1884 121 38 0 chr17 40862410 40862675 -48641878 + AluSx SINE Alu 1 275 -37 221 0 35 0 chr17 40862680 40862709 -48641844 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1690 185 99 143 chr17 40862709 40862736 -48641817 + LTR8 LTR ERV1 333 360 -331 4708 142 16 46 chr17 40862736 40863555 -48640998 - LTR25 LTR ERV1 0 794 1 1690 185 99 143 chr17 40863555 40863578 -48640975 + LTR8 LTR ERV1 360 382 -309 2515 53 7 0 chr17 40863578 40863877 -48640676 + AluY SINE Alu 1 301 -10 1690 185 99 143 chr17 40863877 40864264 -48640289 + LTR8 LTR ERV1 382 691 0 2306 72 10 3 chr17 40865143 40865448 -48639105 - AluSq SINE Alu -6 307 1 433 137 53 53 chr17 40866135 40866230 -48638323 - MIR3 SINE MIR -52 156 62 1495 196 77 0 chr17 40866612 40866897 -48637656 - AluJo SINE Alu -5 307 1 578 178 68 51 chr17 40867802 40867920 -48636633 + FLAM_A SINE Alu 2 121 -12 2124 151 3 0 chr17 40868518 40868829 -48635724 - AluJb SINE Alu 0 312 1 646 266 102 13 chr17 40869021 40869257 -48635296 + MIR SINE MIR 3 255 -7 316 194 0 14 chr17 40869419 40869491 -48635062 + AluS SINE Alu 232 302 0 2015 144 7 7 chr17 40869620 40869919 -48634634 + AluJo SINE Alu 1 299 -13 2187 101 4 0 chr17 40870112 40870426 -48634127 - AluSg SINE Alu 0 315 1 1059 118 0 0 chr17 40870426 40870561 -48633992 - AluSq/x SINE Alu -178 135 1 253 280 213 47 chr17 40871076 40871226 -48633327 + MIR SINE MIR 8 182 -80 276 343 21 43 chr17 40871683 40871823 -48632730 + MIR SINE MIR 14 150 -112 1144 144 0 0 chr17 40873524 40873684 -48630869 + FRAM SINE Alu 1 160 -16 401 244 126 16 chr17 40874455 40874582 -48629971 - MER5A DNA MER1_type -3 186 46 2454 52 0 39 chr17 40874727 40875033 -48629520 + AluY SINE Alu 1 294 -17 1937 160 3 0 chr17 40875055 40875349 -48629204 + AluJb SINE Alu 3 297 -15 184 160 0 80 chr17 40875406 40875456 -48629097 - MIR SINE MIR -58 150 105 1843 116 55 41 chr17 40875677 40875969 -48628584 + AluSq SINE Alu 1 296 -17 412 286 99 6 chr17 40876444 40876615 -48627938 - MER5A DNA MER1_type -2 187 1 197 322 17 0 chr17 40877015 40877074 -48627479 - L3 LINE CR1 -1 1576 1517 712 176 0 17 chr17 40877102 40877221 -48627332 - FRAM SINE Alu -20 156 40 297 225 0 0 chr17 40877226 40877315 -48627238 + CT-rich Low_complexity Low_complexity 4 92 0 402 271 66 42 chr17 40877339 40877505 -48627048 - L2 LINE L2 -41 3272 3103 962 212 32 41 chr17 40877570 40877873 -48626680 + L1MA9 LINE L1 6011 6293 -4 2402 84 0 3 chr17 40878626 40878923 -48625630 - AluY SINE Alu -15 296 1 445 164 16 131 chr17 40879624 40879694 -48624859 - MIR SINE MIR -1 261 208 2127 93 0 17 chr17 40879694 40880017 -48624536 - AluSx SINE Alu 0 319 2 445 164 16 131 chr17 40880017 40880067 -48624486 - MIR SINE MIR -54 208 154 2153 112 0 0 chr17 40880391 40880686 -48623867 - AluSx SINE Alu -17 295 1 2045 120 3 7 chr17 40880693 40880861 -48623692 - AluSx SINE Alu -13 299 131 378 0 0 0 chr17 40880861 40880903 -48623650 + (TG)n Simple_repeat Simple_repeat 1 42 0 2045 120 3 7 chr17 40880903 40881034 -48623519 - AluSx SINE Alu -181 131 1 835 150 0 0 chr17 40881075 40881208 -48623345 + AluSq/x SINE Alu 1 133 -180 325 182 0 0 chr17 40881453 40881508 -48623045 + Alu SINE Alu 240 294 -7 1822 146 13 0 chr17 40881683 40881984 -48622569 - AluY SINE Alu -6 305 1 2120 95 14 0 chr17 40881986 40882280 -48622273 - AluSq SINE Alu -15 298 1 1448 179 19 4 chr17 40882327 40882589 -48621964 - AluJo SINE Alu -46 266 1 299 218 91 36 chr17 40882595 40882760 -48621793 - L1ME LINE L1 -731 5431 5258 1235 172 0 20 chr17 40882819 40882877 -48621676 - MER20 DNA MER1_type -1 218 160 336 94 0 0 chr17 40882877 40882930 -48621623 + (TG)n Simple_repeat Simple_repeat 2 54 0 1235 172 0 20 chr17 40882930 40883075 -48621478 - MER20 DNA MER1_type -59 160 19 1945 125 10 22 chr17 40883115 40883426 -48621127 + AluSx SINE Alu 5 311 -1 1327 273 78 14 chr17 40883430 40884097 -48620456 - L1ME LINE L1 -1053 5093 4384 2198 91 0 7 chr17 40884110 40884408 -48620145 - AluSx SINE Alu -16 296 1 788 168 0 0 chr17 40884424 40884549 -48620004 - FLAM_C SINE Alu -7 126 2 1470 205 7 13 chr17 40884678 40884980 -48619573 - AluJo SINE Alu -11 301 2 182 150 25 0 chr17 40885017 40885057 -48619496 + (TA)n Simple_repeat Simple_repeat 2 42 0 265 323 47 19 chr17 40885186 40885314 -48619239 - MIR SINE MIR -67 141 6 313 132 0 38 chr17 40885331 40885384 -48619169 + AluJo SINE Alu 86 136 -166 814 165 0 0 chr17 40885384 40885517 -48619036 + AluSq/x SINE Alu 1 133 -180 382 263 178 0 chr17 40885536 40885654 -48618899 + MIR SINE MIR 113 251 -11 1837 167 0 0 chr17 40885925 40886230 -48618323 + AluJo SINE Alu 3 307 -5 1957 130 0 19 chr17 40886401 40886536 -48618017 + AluSx SINE Alu 1 137 -175 2115 95 3 0 chr17 40886536 40886820 -48617733 + AluSp SINE Alu 1 285 -28 243 61 0 0 chr17 40886820 40886853 -48617700 + (CA)n Simple_repeat Simple_repeat 2 34 0 1957 130 0 19 chr17 40886853 40887023 -48617530 + AluSx SINE Alu 135 301 -11 292 247 41 72 chr17 40887676 40887773 -48616780 + MIR3 SINE MIR 13 106 -102 222 260 60 0 chr17 40887774 40887824 -48616729 + L2 LINE L2 3220 3272 0 247 170 31 0 chr17 40887832 40887892 -48616661 + MIR SINE MIR 107 170 -64 386 213 187 65 chr17 40887922 40888077 -48616476 - MER5A DNA MER1_type -1 188 15 213 65 0 0 chr17 40888077 40888108 -48616445 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 734 176 8 0 chr17 40888108 40888227 -48616326 - FLAM_C SINE Alu -22 121 2 1244 157 57 90 chr17 40888257 40888556 -48615997 - AluJo SINE Alu -23 289 1 4629 136 18 24 chr17 40888696 40889268 -48615285 + LTR39 LTR ERV1 48 615 -168 2147 110 7 13 chr17 40889268 40889577 -48614976 + AluSx SINE Alu 1 307 -5 4629 136 18 24 chr17 40889577 40889745 -48614808 + LTR39 LTR ERV1 615 783 0 435 271 52 0 chr17 40889745 40889839 -48614714 + MER81 DNA DNA 16 114 0 394 273 56 14 chr17 40889925 40890068 -48614485 - MIR3 SINE MIR -36 172 24 1972 167 68 74 chr17 40890343 40890396 -48614157 - L1M3 LINE L1 -740 5440 5388 1887 110 43 3 chr17 40890396 40890678 -48613875 - AluSq SINE Alu -20 293 1 2352 47 0 13 chr17 40890685 40890983 -48613570 - AluY SINE Alu -17 294 1 1972 167 68 74 chr17 40890983 40891198 -48613355 - L1M3 LINE L1 -798 5382 5167 1876 152 0 3 chr17 40891198 40891494 -48613059 - AluJb SINE Alu -17 295 1 1972 167 68 74 chr17 40891494 40891678 -48612875 - L1M3 LINE L1 -1013 5167 4983 2336 84 0 0 chr17 40891678 40891987 -48612566 - AluSg SINE Alu -1 309 1 1972 167 68 74 chr17 40891987 40892219 -48612334 - L1M3 LINE L1 -1197 4983 4769 1535 133 155 47 chr17 40892423 40892715 -48611838 + MSTA LTR MaLR 60 392 -36 2286 97 3 0 chr17 40892715 40893025 -48611528 - AluSq SINE Alu -2 311 1 1535 133 155 47 chr17 40893025 40893054 -48611499 + MSTA LTR MaLR 392 416 -12 776 289 75 12 chr17 40893058 40893447 -48611106 - L1ME3A LINE L1 -311 5859 5449 2258 66 0 3 chr17 40893447 40893748 -48610805 - AluSg SINE Alu -10 300 1 25 31 0 0 chr17 40893918 40893950 -48610603 + AT_rich Low_complexity Low_complexity 1 32 0 817 66 0 0 chr17 40895189 40895295 -48609258 + FLAM_C SINE Alu 6 111 -32 180 77 0 0 chr17 40895448 40895474 -48609079 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 602 316 56 28 chr17 40895477 40895800 -48608753 - L2 LINE L2 -15 3298 2967 446 187 0 0 chr17 40895965 40896040 -48608513 - AluS SINE Alu -236 76 2 1624 147 74 0 chr17 40896041 40896326 -48608227 - AluSx SINE Alu -6 306 1 2143 107 0 10 chr17 40896352 40896662 -48607891 - AluSx SINE Alu -5 307 1 835 239 161 53 chr17 40896776 40897131 -48607422 - L2 LINE L2 -526 2788 2396 789 236 28 11 chr17 40897154 40897169 -48607384 - AluJo/FRAM SINE Alu 0 312 299 2298 87 10 0 chr17 40897169 40897479 -48607074 - AluSp SINE Alu 0 313 1 789 236 28 11 chr17 40897479 40897641 -48606912 - AluJo/FRAM SINE Alu -13 299 132 583 250 214 67 chr17 40897672 40898060 -48606493 - L2 LINE L2 -958 2356 1912 332 162 54 153 chr17 40898583 40898652 -48605901 + MER69A DNA AcHobo 1 57 -2469 2249 95 0 0 chr17 40898652 40898948 -48605605 - AluSx SINE Alu -16 296 1 332 162 54 153 chr17 40898948 40898989 -48605564 + MER69A DNA AcHobo 57 100 -77 1579 166 29 0 chr17 40899305 40899583 -48604970 - AluJo SINE Alu -18 294 9 386 240 94 0 chr17 40899634 40899730 -48604823 + MER5A DNA MER1_type 8 112 -77 2295 75 0 3 chr17 40900197 40900492 -48604061 - AluSp SINE Alu -19 294 1 2087 81 34 3 chr17 40901783 40902124 -48602429 + AluY SINE Alu 1 350 0 956 233 43 0 chr17 40906665 40906875 -48597678 + MIR SINE MIR 13 231 -31 1283 191 4 0 chr17 40908446 40908676 -48595877 - AluJo SINE Alu -81 231 1 1971 133 0 0 chr17 40908696 40909042 -48595511 - AluSq SINE Alu 0 346 1 356 197 138 110 chr17 40909052 40909222 -48595331 + L1ME3A LINE L1 5931 6110 -60 793 196 0 0 chr17 40909222 40909355 -48595198 + FLAM_C SINE Alu 1 133 0 356 197 138 110 chr17 40909355 40909402 -48595151 + L1ME3A LINE L1 6110 6154 -16 366 61 0 0 chr17 40909616 40909665 -48594888 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr17 40909665 40909687 -48594866 + (TGG)n Simple_repeat Simple_repeat 3 24 0 295 247 0 62 chr17 40909977 40910058 -48594495 + MIR3 SINE MIR 130 205 -3 803 254 16 5 chr17 40910243 40910432 -48594121 + MER58C DNA MER1_type 15 205 -10 2196 76 34 0 chr17 40910435 40910726 -48593827 + AluSx SINE Alu 3 303 -9 26 74 0 0 chr17 40910840 40910894 -48593659 + AT_rich Low_complexity Low_complexity 1 54 0 577 242 23 0 chr17 40911912 40912040 -48592513 - MER5A DNA MER1_type -22 167 37 1197 166 38 0 chr17 40913137 40913348 -48591205 + MER20 DNA MER1_type 1 219 0 214 282 17 17 chr17 40913765 40913842 -48590711 - MIR SINE MIR -34 174 97 337 212 164 48 chr17 40914206 40914352 -48590201 + MER69A DNA AcHobo 5 167 -10 658 194 24 8 chr17 40914489 40914613 -48589940 - LTR39 LTR ERV1 0 783 658 514 73 0 0 chr17 40914899 40914967 -48589586 + AluSg SINE Alu 2 69 -242 327 208 39 13 chr17 40915161 40915238 -48589315 + MER91A DNA MER1_type 26 104 -92 405 299 24 8 chr17 40916587 40916714 -48587839 - MLT1H LTR MaLR -326 223 95 2180 180 33 67 chr17 40917142 40917653 -48586900 + LTR10E LTR ERV1 115 608 -25 2235 102 13 0 chr17 40917680 40917983 -48586570 + AluSx SINE Alu 1 307 -5 1452 130 0 0 chr17 40918304 40918520 -48586033 + AluSg SINE Alu 65 280 -30 734 0 12 0 chr17 40918520 40918606 -48585947 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 301 283 20 20 chr17 40969769 40969868 -48534685 - MIR SINE MIR -5 257 159 662 331 68 18 chr17 40969966 40970292 -48534261 + L1MC4a LINE L1 5541 5882 -1926 345 24 0 0 chr17 40970316 40970358 -48534195 + (CA)n Simple_repeat Simple_repeat 2 43 0 2060 76 4 0 chr17 40970575 40970838 -48533715 + AluY SINE Alu 33 296 -15 1228 187 42 49 chr17 40970854 40971167 -48533386 + AluJo SINE Alu 1 311 0 2390 79 0 0 chr17 40971171 40971474 -48533079 + AluSx SINE Alu 1 303 -9 596 336 55 0 chr17 40971762 40971979 -48532574 - MIR SINE MIR -31 231 3 1666 188 3 0 chr17 40972114 40972401 -48532152 + AluJo SINE Alu 5 292 -20 229 287 74 56 chr17 40972417 40972525 -48532028 + L2 LINE L2 3158 3267 -5 464 278 44 50 chr17 40972927 40973107 -48531446 - MIR3 SINE MIR -11 197 19 554 341 130 33 chr17 40973591 40974051 -48530502 + L2 LINE L2 2231 2735 -579 682 182 53 8 chr17 40974090 40974222 -48530331 - FLAM_C SINE Alu -5 138 1 2326 96 0 6 chr17 40974246 40974560 -48529993 - AluSx SINE Alu 0 312 1 648 299 41 89 chr17 40974560 40974974 -48529579 + L2 LINE L2 2878 3271 -1 283 269 179 41 chr17 40975473 40975618 -48528935 - MIR SINE MIR 0 262 98 1969 100 60 0 chr17 40977469 40977750 -48526803 + AluSx SINE Alu 1 298 -14 208 316 120 73 chr17 40978519 40978835 -48525718 + L2 LINE L2 2637 2967 -347 2162 115 0 0 chr17 40978898 40979193 -48525360 - AluSx SINE Alu -17 295 1 1269 114 0 0 chr17 40980055 40980231 -48524322 - AluSg/x SINE Alu 0 310 135 1962 203 26 34 chr17 40980523 40980992 -48523561 + MLT1C LTR MaLR 1 465 -2 1910 125 3 33 chr17 40981172 40981475 -48523078 + AluJb SINE Alu 5 298 -14 623 259 6 19 chr17 40981620 40981782 -48522771 + MLT1J LTR MaLR 221 380 -131 294 331 71 7 chr17 40981894 40982048 -48522505 + L2 LINE L2 2895 3058 -214 304 278 33 11 chr17 40983352 40983442 -48521111 - MIR SINE MIR -73 189 98 2123 99 6 16 chr17 40983443 40983755 -48520798 + AluSx SINE Alu 1 309 -3 186 252 54 108 chr17 40983917 40984028 -48520525 + L2 LINE L2 3168 3272 0 266 277 109 10 chr17 40984674 40984775 -48519778 - MLT1L LTR MaLR -133 482 372 1536 156 0 41 chr17 40985091 40985361 -48519192 + AluJo SINE Alu 33 291 -21 395 176 8 42 chr17 40985668 40985787 -48518766 + CT-rich Low_complexity Low_complexity 2 116 0 1978 136 7 3 chr17 40985803 40986111 -48518442 - AluSq SINE Alu -1 312 4 956 106 21 0 chr17 40986923 40987065 -48517488 + L1MA5A LINE L1 6149 6293 -4 1821 139 3 3 chr17 40987076 40987363 -48517190 + AluJb SINE Alu 4 290 -22 1775 107 54 4 chr17 40987462 40987742 -48516811 + MER49 LTR ERV1 1 294 -629 1553 99 144 15 chr17 40987761 40988024 -48516529 - AluSg1 SINE Alu -12 297 1 794 141 134 47 chr17 40988217 40988366 -48516187 - AluJo SINE Alu -4 298 137 1304 98 26 41 chr17 40988369 40988604 -48515949 - AluSp SINE Alu -8 305 1 902 128 0 23 chr17 40988618 40988751 -48515802 - FLAM_C SINE Alu -3 130 1 1147 265 17 17 chr17 40988751 40989045 -48515508 + MER4D LTR ERV1 574 867 -36 1102 271 49 49 chr17 40989242 40989461 -48515092 + MLT1J LTR MaLR 3 221 -290 1791 126 8 0 chr17 40989461 40989722 -48514831 + AluSx SINE Alu 37 299 -13 1931 98 91 7 chr17 40989731 40990017 -48514536 + AluSx SINE Alu 1 310 -2 1102 271 49 49 chr17 40990017 40990153 -48514400 + MLT1J LTR MaLR 228 368 -143 266 366 41 45 chr17 40990674 40990805 -48513748 + MIR SINE MIR 16 147 -115 2163 102 3 0 chr17 40990805 40991100 -48513453 - AluSq SINE Alu -17 296 1 266 366 41 45 chr17 40991100 40991214 -48513339 + MIR SINE MIR 147 260 -2 435 223 29 0 chr17 40991688 40991791 -48512762 + MER5A DNA MER1_type 4 109 -80 1798 143 3 3 chr17 40991923 40992209 -48512344 + AluJo SINE Alu 3 288 -24 517 269 113 0 chr17 40992231 40992391 -48512162 + MIR SINE MIR 11 188 -74 1627 152 7 14 chr17 40992429 40992712 -48511841 - AluJb SINE Alu -15 297 17 558 339 28 3 chr17 40993243 40993529 -48511024 - L1ME4a LINE L1 -175 5946 5654 2343 87 0 0 chr17 40993582 40993882 -48510671 + AluSq SINE Alu 1 300 -13 3296 165 39 19 chr17 40993919 40994512 -48510041 - MER6A DNA MER2_type 0 605 1 305 307 40 0 chr17 40994527 40994628 -48509925 - MER5A DNA MER1_type -83 106 2 266 253 145 0 chr17 40994751 40994834 -48509719 - MIR SINE MIR -65 197 103 784 127 7 86 chr17 40995141 40995284 -48509269 + L1M3 LINE L1 5271 5387 -787 2204 64 54 10 chr17 40995284 40995579 -48508974 + AluY SINE Alu 1 308 -3 784 127 7 86 chr17 40995579 40995652 -48508901 + L1M3 LINE L1 5387 5464 -710 399 21 0 0 chr17 40995655 40995703 -48508850 + (TC)n Simple_repeat Simple_repeat 2 49 0 443 267 0 0 chr17 40995729 40995819 -48508734 + L1MC4 LINE L1 6614 6703 -1339 2249 82 0 7 chr17 40995838 40996130 -48508423 - AluSq SINE Alu -23 290 1 3799 133 47 64 chr17 40996130 40996340 -48508213 + L1MB5 LINE L1 5468 5680 -494 2171 105 0 3 chr17 40996340 40996636 -48507917 + AluSg SINE Alu 2 296 -14 3799 133 47 64 chr17 40996636 40996647 -48507906 + L1MB5 LINE L1 5680 5690 -484 2189 120 0 0 chr17 40996647 40996947 -48507606 + AluSx SINE Alu 2 301 -11 2069 93 0 4 chr17 40996947 40997225 -48507328 + AluSc SINE Alu 1 277 -32 1033 52 0 58 chr17 40997226 40997417 -48507136 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3799 133 47 64 chr17 40997417 40997781 -48506772 + L1MB5 LINE L1 5689 6058 -116 1966 157 0 0 chr17 40997781 40998086 -48506467 + AluJb SINE Alu 1 305 -7 3799 133 47 64 chr17 40998086 40998166 -48506387 + L1MB5 LINE L1 6058 6129 -45 1935 93 25 7 chr17 40998166 40998472 -48506081 - AluSx SINE Alu 0 311 1 3799 133 47 64 chr17 40998472 40998518 -48506035 + L1MB5 LINE L1 6129 6174 0 245 313 0 12 chr17 40998796 40998879 -48505674 - MIR SINE MIR -146 116 35 2200 117 3 0 chr17 40998952 40999261 -48505292 - AluSx SINE Alu 0 312 3 304 236 16 89 chr17 41001157 41001230 -48503323 - L2 LINE L2 -85 3228 3166 1815 143 0 26 chr17 41001230 41001537 -48503016 - AluJo SINE Alu -13 299 1 304 236 16 89 chr17 41001537 41001586 -48502967 - L2 LINE L2 -147 3166 3115 2444 68 10 0 chr17 41001586 41001894 -48502659 + AluY SINE Alu 1 311 0 2001 144 3 3 chr17 41001954 41002266 -48502287 + AluSx SINE Alu 1 312 0 578 338 92 36 chr17 41002298 41002798 -48501755 - L3 LINE CR1 -345 1232 705 2087 113 3 7 chr17 41003005 41003307 -48501246 + AluSx SINE Alu 1 301 -11 244 324 81 36 chr17 41003339 41003384 -48501169 - MER5A DNA MER1_type -6 183 141 180 0 0 0 chr17 41003384 41003404 -48501149 + (CAA)n Simple_repeat Simple_repeat 2 21 0 244 324 81 36 chr17 41003404 41003469 -48501084 - MER5A DNA MER1_type -48 141 68 714 181 19 25 chr17 41003863 41004023 -48500530 - MER96B DNA MER1_type? -2 415 257 921 104 0 8 chr17 41004025 41004159 -48500394 - FLAM_C SINE Alu -10 133 1 225 188 62 62 chr17 41004159 41004239 -48500314 - MER96B DNA MER1_type? -156 261 182 2603 270 91 64 chr17 41004254 41004891 -48499662 + HAL1 LINE L1 939 1557 -950 2075 111 0 14 chr17 41004891 41005188 -48499365 + AluSx SINE Alu 9 301 -11 2603 270 91 64 chr17 41005188 41005542 -48499011 + HAL1 LINE L1 1557 1900 -607 1527 188 33 10 chr17 41005542 41005846 -48498707 - AluJb SINE Alu -1 311 1 2603 270 91 64 chr17 41005846 41006374 -48498179 + HAL1 LINE L1 1900 2501 -6 21 0 0 0 chr17 41006377 41006398 -48498155 + AT_rich Low_complexity Low_complexity 1 21 0 244 260 0 21 chr17 41006471 41006567 -48497986 + (CA)n Simple_repeat Simple_repeat 1 94 0 409 326 122 13 chr17 41007585 41007815 -48496738 - MIR SINE MIR -4 258 4 * 639 170 16 129 chr17 41007815 41007911 -48496642 - MER5B DNA MER1_type -25 153 86 2411 69 0 0 chr17 41007911 41008215 -48496338 - AluY SINE Alu -7 304 1 639 170 16 129 chr17 41008215 41008293 -48496260 - MER5B DNA MER1_type -92 86 1 345 100 20 0 chr17 41008396 41008446 -48496107 - MER20 DNA MER1_type 0 219 169 4566 144 43 28 chr17 41008452 41008640 -48495913 - L1MB3 LINE L1 -1 6182 5998 1724 172 3 13 chr17 41008640 41008943 -48495610 - AluJo SINE Alu -12 300 1 4566 144 43 28 chr17 41008943 41009619 -48494934 - L1MB3 LINE L1 -185 5998 5305 916 163 0 65 chr17 41009621 41009805 -48494748 - MER20 DNA MER1_type -32 187 16 481 318 35 6 chr17 41009873 41010046 -48494507 + MER117 DNA MER1_type 4 181 -16 1708 159 0 43 chr17 41010142 41010444 -48494109 - AluJb SINE Alu -23 289 1 2303 94 3 0 chr17 41010466 41010775 -48493778 + AluSq SINE Alu 1 310 -3 310 314 15 57 chr17 41011749 41011976 -48492577 + MIR SINE MIR 20 237 -25 930 252 46 0 chr17 41012474 41012712 -48491841 - MIR SINE MIR 0 262 14 201 175 0 0 chr17 41013228 41013268 -48491285 + G-rich Low_complexity Low_complexity 4 43 0 437 335 54 10 chr17 41013341 41013544 -48491009 + MIR SINE MIR 3 214 -48 706 94 0 0 chr17 41013581 41013677 -48490876 + LTR26E LTR ERV1 1 96 -526 2118 128 0 0 chr17 41013677 41013981 -48490572 - AluSx SINE Alu -8 304 1 1259 187 127 26 chr17 41014005 41014272 -48490281 + AluJo SINE Alu 1 294 -8 38 0 0 0 chr17 41014274 41014312 -48490241 + AT_rich Low_complexity Low_complexity 1 38 0 1206 131 0 0 chr17 41014312 41014488 -48490065 + FRAM SINE Alu 1 168 -8 786 159 98 54 chr17 41014491 41014559 -48489994 + LTR26E LTR ERV1 280 344 -278 2421 75 0 7 chr17 41014559 41014866 -48489687 - AluSg SINE Alu -5 305 1 786 159 98 54 chr17 41014866 41015082 -48489471 + LTR26E LTR ERV1 344 622 0 270 136 0 0 chr17 41015266 41015310 -48489243 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 186 103 0 0 chr17 41015383 41015412 -48489141 + (CTCA)n Simple_repeat Simple_repeat 1 29 0 265 269 289 29 chr17 41015421 41015663 -48488890 - L2 LINE L2 -33 3280 2976 789 184 40 33 chr17 41015826 41015978 -48488575 - AluJo/FRAM SINE Alu -13 289 137 1182 132 11 0 chr17 41015981 41016163 -48488390 - AluSx SINE Alu 0 312 129 22 35 0 0 chr17 41016165 41016194 -48488359 + AT_rich Low_complexity Low_complexity 1 29 0 1106 66 0 0 chr17 41016208 41016345 -48488208 - AluSx SINE Alu -175 137 1 798 158 0 0 chr17 41016352 41016472 -48488081 - FLAM_C SINE Alu -21 122 3 213 274 0 0 chr17 41017127 41017189 -48487364 - L3b LINE CR1 -208 1375 1314 496 240 62 8 chr17 41017642 41017771 -48486782 - MIR SINE MIR -55 153 18 210 286 71 0 chr17 41018142 41018226 -48486327 + L3b LINE CR1 1309 1398 -185 360 244 28 39 chr17 41019139 41019319 -48485234 + G-rich Low_complexity Low_complexity 3 180 0 243 88 0 0 chr17 41020381 41020415 -48484138 + (A)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr17 41020945 41020991 -48483562 + (TG)n Simple_repeat Simple_repeat 2 47 0 707 108 10 0 chr17 41020992 41021094 -48483459 - FRAM SINE Alu -15 161 59 597 158 189 0 chr17 41021096 41021223 -48483330 - MER5A DNA MER1_type -38 151 1 625 41 0 0 chr17 41021343 41021416 -48483137 - tRNA-Cys-TGC tRNA tRNA -2 73 1 625 41 0 0 chr17 41022100 41022173 -48482380 - tRNA-Cys-TGC tRNA tRNA -2 73 1 2391 41 7 0 chr17 41022372 41022664 -48481889 + AluY SINE Alu 1 294 -17 2142 66 16 20 chr17 41022959 41023262 -48481291 + AluSc SINE Alu 1 302 -7 1268 102 0 0 chr17 41023650 41023827 -48480726 - AluSg/x SINE Alu -2 310 134 2088 118 10 0 chr17 41023827 41024132 -48480421 - AluSx SINE Alu -4 308 1 382 296 90 64 chr17 41024667 41024900 -48479653 - L2 LINE L2 -4 3268 3030 269 287 33 57 chr17 41024996 41025118 -48479435 + L2 LINE L2 3143 3261 -11 2260 93 3 0 chr17 41025118 41025420 -48479133 + AluSp SINE Alu 1 303 -10 2114 62 0 18 chr17 41025422 41025698 -48478855 + AluY SINE Alu 1 271 -40 554 117 0 11 chr17 41025712 41025806 -48478747 + (GGGA)n Simple_repeat Simple_repeat 4 96 0 1853 143 3 13 chr17 41025942 41026243 -48478310 + AluJb SINE Alu 2 299 -13 196 291 29 29 chr17 41026324 41026427 -48478126 + L2 LINE L2 2982 3084 -229 738 197 0 7 chr17 41026445 41026582 -48477971 - FLAM_A SINE Alu -1 141 6 1369 172 0 23 chr17 41026630 41026886 -48477667 - AluJo SINE Alu 0 312 63 2346 90 0 0 chr17 41026895 41027207 -48477346 - AluSp SINE Alu -1 312 1 804 202 29 12 chr17 41027207 41027380 -48477173 + L2 LINE L2 3135 3310 -3 182 259 129 12 chr17 41027383 41027468 -48477085 - MIR SINE MIR -71 191 97 * 710 264 60 26 chr17 41027467 41027661 -48476892 + L2 LINE L2 2954 3161 -152 2098 110 33 3 chr17 41027661 41027960 -48476593 + AluSq SINE Alu 1 308 -5 710 264 60 26 chr17 41027960 41028034 -48476519 + L2 LINE L2 3161 3231 -82 512 297 13 13 chr17 41028546 41028701 -48475852 - MIR SINE MIR -79 183 29 221 226 38 0 chr17 41028791 41028844 -48475709 - MIR SINE MIR -133 129 75 2139 109 7 13 chr17 41029122 41029426 -48475127 - AluSx SINE Alu -10 302 1 782 262 0 24 chr17 41029467 41029677 -48474876 - MIR SINE MIR -25 237 33 2135 96 0 4 chr17 41029919 41030200 -48474353 - AluSx SINE Alu -21 291 12 266 325 13 0 chr17 41030208 41030285 -48474268 - MIR SINE MIR -106 156 79 212 264 104 28 chr17 41030583 41030689 -48473864 - L2 LINE L2 -20 3252 3139 832 119 0 77 chr17 41030719 41030862 -48473691 - FLAM_C SINE Alu -1 132 1 250 299 264 0 chr17 41030862 41030949 -48473604 - MER5A DNA MER1_type -6 183 74 1625 139 75 0 chr17 41030950 41031302 -48473251 - AluSx SINE Alu 0 312 1 645 116 0 0 chr17 41031306 41031401 -48473152 - AluSg/x SINE Alu -3 309 215 1972 105 0 11 chr17 41031401 41031678 -48472875 - AluSx SINE Alu -38 274 1 252 0 0 0 chr17 41031680 41031708 -48472845 + (TTG)n Simple_repeat Simple_repeat 3 30 0 944 61 0 38 chr17 41031708 41031839 -48472714 - AluSq/x SINE Alu -187 126 1 341 250 0 0 chr17 41031844 41031912 -48472641 - MER5A DNA MER1_type -118 71 4 330 337 119 24 chr17 41034394 41034932 -48469621 + L2 LINE L2 2606 3224 -48 219 203 0 0 chr17 41035471 41035530 -48469023 + A-rich Low_complexity Low_complexity 1 59 0 195 42 0 0 chr17 41035583 41035607 -48468946 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 1538 146 47 25 chr17 41035670 41035974 -48468579 - AluJb SINE Alu 0 314 5 209 390 0 0 chr17 41035979 41036038 -48468515 - L2 LINE L2 -91 3181 3123 234 250 0 0 chr17 41036104 41036156 -48468397 + LTR30 LTR ERV1 1 52 -670 1775 104 30 190 chr17 41036156 41036404 -48468149 + LTR12 LTR ERV1 55 109 -605 2427 81 0 0 chr17 41036404 41036714 -48467839 + AluSg SINE Alu 1 310 0 1775 104 30 190 chr17 41036714 41037035 -48467518 + LTR12 LTR ERV1 109 480 -234 2230 113 0 0 chr17 41037475 41037785 -48466768 - AluSx SINE Alu 0 312 3 249 295 171 31 chr17 41037915 41038044 -48466509 + MIR SINE MIR 8 154 -108 329 355 147 37 chr17 41038069 41038126 -48466427 + L2 LINE L2 2246 2295 -1019 2055 136 7 0 chr17 41038126 41038435 -48466118 - AluSx SINE Alu -1 311 1 329 355 147 37 chr17 41038435 41038572 -48465981 + L2 LINE L2 2295 2416 -898 2156 107 27 0 chr17 41038572 41038872 -48465681 - AluSx SINE Alu -4 308 1 329 355 147 37 chr17 41038872 41038885 -48465668 + L2 LINE L2 2416 2426 -888 2335 85 7 0 chr17 41038885 41039192 -48465361 - AluSg SINE Alu -1 309 1 329 355 147 37 chr17 41039192 41039253 -48465300 + L2 LINE L2 2426 2479 -835 1535 144 45 55 chr17 41039253 41039565 -48464988 - AluJo SINE Alu -3 309 1 329 355 147 37 chr17 41039565 41039811 -48464742 + L2 LINE L2 2479 2820 -494 339 294 221 36 chr17 41039874 41040150 -48464403 + L2 LINE L2 2945 3271 -1 272 234 64 32 chr17 41040197 41040291 -48464262 + MIR SINE MIR 33 129 -79 381 22 0 0 chr17 41040349 41040395 -48464158 + (CA)n Simple_repeat Simple_repeat 2 47 0 2199 79 38 7 chr17 41040479 41040771 -48463782 + AluSq SINE Alu 5 305 -8 398 233 67 17 chr17 41043927 41044047 -48460506 + MIR3 SINE MIR 34 159 -49 377 308 113 22 chr17 41045293 41045478 -48459075 - MIR3 SINE MIR -3 205 4 1668 156 29 19 chr17 41045986 41046293 -48458260 - AluJo SINE Alu -2 310 1 405 313 46 0 chr17 41046319 41046450 -48458103 - MIR SINE MIR 0 262 126 676 244 108 79 chr17 41046460 41046622 -48457931 + L1MC4 LINE L1 7470 7626 -416 2158 99 41 0 chr17 41046622 41046916 -48457637 + AluY SINE Alu 1 306 -5 2259 89 30 0 chr17 41046917 41047219 -48457334 + AluY SINE Alu 1 311 0 1993 123 0 33 chr17 41047227 41047527 -48457026 + AluSx SINE Alu 1 290 -22 676 244 108 79 chr17 41047527 41047596 -48456957 + L1MC4 LINE L1 7632 7698 -344 1944 127 10 7 chr17 41047596 41047887 -48456666 + AluSq SINE Alu 6 297 -16 676 244 108 79 chr17 41047887 41047983 -48456570 + L1MC4 LINE L1 7698 7790 -252 2217 120 0 16 chr17 41047983 41048300 -48456253 + AluSx SINE Alu 1 312 0 676 244 108 79 chr17 41048300 41048355 -48456198 + L1MC4 LINE L1 7790 7842 -200 930 129 0 0 chr17 41048355 41048487 -48456066 - FLAM_C SINE Alu 0 133 2 676 244 108 79 chr17 41048487 41048647 -48455906 + L1MC4 LINE L1 7842 8042 0 1972 138 0 0 chr17 41048691 41049004 -48455549 - AluSx SINE Alu 0 312 1 633 216 111 40 chr17 41049004 41049193 -48455360 - MIR SINE MIR -41 221 16 256 252 19 28 chr17 41049238 41049345 -48455208 - MIR SINE MIR -56 206 101 1929 105 10 46 chr17 41049345 41049491 -48455062 + AluSx SINE Alu 1 132 -180 2179 111 3 0 chr17 41049491 41049789 -48454764 + AluSg SINE Alu 1 299 -11 1929 105 10 46 chr17 41049789 41049947 -48454606 + AluSx SINE Alu 132 294 -18 2160 75 0 11 chr17 41050029 41050359 -48454194 + AluSc SINE Alu 1 327 0 237 279 87 10 chr17 41050386 41050490 -48454063 - MIR SINE MIR -77 185 74 1289 175 13 0 chr17 41050743 41050971 -48453582 + AluJo SINE Alu 81 311 -1 288 312 108 45 chr17 41051125 41051303 -48453250 - MIR SINE MIR -62 200 13 243 267 0 35 chr17 41052781 41052867 -48451686 + GA-rich Low_complexity Low_complexity 3 85 0 377 229 29 67 chr17 41054883 41055071 -48449482 - MIR SINE MIR -58 150 3 1985 131 3 0 chr17 41055342 41055645 -48448908 + AluSx SINE Alu 1 304 0 1656 126 49 8 chr17 41055657 41055904 -48448649 + AluSg SINE Alu 35 291 -19 1930 128 10 3 chr17 41055906 41056194 -48448359 + AluSg SINE Alu 3 292 -18 2072 123 3 3 chr17 41056371 41056673 -48447880 + AluSq SINE Alu 1 302 -11 2172 113 0 0 chr17 41056693 41057012 -48447541 + AluSg SINE Alu 1 319 0 417 189 256 0 chr17 41057015 41057105 -48447448 + AluJo/FLAM SINE Alu 2 114 -188 2125 100 4 0 chr17 41057105 41057408 -48447145 - AluSp SINE Alu 0 304 1 2197 88 0 19 chr17 41057440 41057748 -48446805 + AluSg SINE Alu 1 302 -8 1698 145 76 0 chr17 41057750 41058026 -48446527 + AluJo SINE Alu 1 297 -15 2114 125 0 0 chr17 41058034 41058338 -48446215 - AluSx SINE Alu -8 304 1 271 250 193 57 chr17 41058356 41058532 -48446021 - MIR SINE MIR 0 262 63 2339 80 0 0 chr17 41058533 41058833 -48445720 + AluY SINE Alu 1 300 -11 399 303 0 0 chr17 41060648 41060933 -48443620 + (CA)n Simple_repeat Simple_repeat 1 285 0 201 163 0 61 chr17 41064393 41064442 -48440111 + G-rich Low_complexity Low_complexity 3 48 0 237 271 0 28 chr17 41065236 41065343 -48439210 + CT-rich Low_complexity Low_complexity 2 105 0 * 239 217 17 61 chr17 41065263 41065378 -48439175 + C-rich Low_complexity Low_complexity 5 114 0 292 281 58 75 chr17 41066077 41066275 -48438278 + MIR SINE MIR 10 196 -55 2448 67 0 0 chr17 41066945 41067242 -48437311 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 41067243 41067266 -48437287 + AT_rich Low_complexity Low_complexity 1 23 0 990 142 31 0 chr17 41069011 41069173 -48435380 - AluSg/x SINE Alu -15 295 129 2096 140 3 0 chr17 41069175 41069482 -48435071 - AluSx SINE Alu -4 308 1 663 192 33 0 chr17 41069599 41069719 -48434834 + FLAM_A SINE Alu 1 124 -9 209 206 127 0 chr17 41070448 41070511 -48434042 + MIR SINE MIR 126 196 -66 2301 105 0 0 chr17 41070785 41071091 -48433462 - AluY SINE Alu -5 306 1 1952 131 14 0 chr17 41071127 41071417 -48433136 - AluSx SINE Alu -18 294 1 2048 116 14 0 chr17 41072381 41072675 -48431878 - AluSx SINE Alu -14 298 1 1265 114 81 76 chr17 41072993 41073136 -48431417 - AluSx SINE Alu -27 285 139 2866 9 0 0 chr17 41073136 41073454 -48431099 - AluYb8 SINE Alu 0 318 1 1265 114 81 76 chr17 41073454 41073546 -48431007 - AluSx SINE Alu -173 139 49 2037 110 21 0 chr17 41073791 41074081 -48430472 + AluSp SINE Alu 1 296 -17 206 220 20 0 chr17 41074198 41074248 -48430305 - MIR SINE MIR -73 135 85 1907 143 3 16 chr17 41074357 41074664 -48429889 + AluJb SINE Alu 1 303 -9 926 215 0 11 chr17 41075149 41075326 -48429227 + FAM SINE Alu 1 175 0 2220 103 0 13 chr17 41075335 41075647 -48428906 + AluSx SINE Alu 1 308 -4 200 274 14 55 chr17 41075733 41075806 -48428747 - MIR3 SINE MIR -40 168 99 423 348 12 12 chr17 41076823 41076984 -48427569 + MIR3 SINE MIR 5 165 -43 399 336 94 0 chr17 41076982 41077131 -48427422 + MIR SINE MIR 81 243 -19 * 2277 105 0 3 chr17 41078883 41079196 -48425357 - AluSx SINE Alu 0 312 1 238 275 169 56 chr17 41080218 41080378 -48424175 - MIR3 SINE MIR -21 187 10 2299 98 0 0 chr17 41081280 41081587 -48422966 - AluSx SINE Alu -5 307 1 21 0 0 0 chr17 41083116 41083137 -48421416 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 41085452 41085487 -48419066 + GC_rich Low_complexity Low_complexity 1 35 0 1842 157 7 7 chr17 41086232 41086538 -48418015 - AluJo SINE Alu -3 309 4 1882 146 58 0 chr17 41086585 41086880 -48417673 - AluJo SINE Alu 0 312 1 385 303 119 38 chr17 41087669 41087762 -48416791 + MIR SINE MIR 20 104 -158 2000 116 14 3 chr17 41087762 41088055 -48416498 - AluSq SINE Alu -17 296 1 385 303 119 38 chr17 41088055 41088146 -48416407 + MIR SINE MIR 104 219 -43 22 0 0 0 chr17 41088169 41088191 -48416362 + AT_rich Low_complexity Low_complexity 1 22 0 604 195 0 47 chr17 41088198 41088326 -48416227 - FLAM_C SINE Alu -19 124 3 2485 59 0 0 chr17 41088340 41088644 -48415909 - AluY SINE Alu -7 304 1 302 292 192 8 chr17 41089006 41089126 -48415427 + L2 LINE L2 3118 3259 -13 185 65 32 0 chr17 41089126 41089157 -48415396 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 821 85 0 0 chr17 41089248 41089354 -48415199 - AluSx SINE Alu -13 297 192 253 57 0 0 chr17 41089355 41089390 -48415163 - AluSx SINE Alu -186 117 83 1833 152 10 7 chr17 41090090 41090380 -48414173 + AluJb SINE Alu 5 295 -17 213 39 0 0 chr17 41090905 41090931 -48413622 + (CAG)n Simple_repeat Simple_repeat 3 28 0 384 137 359 0 chr17 41091081 41091198 -48413355 - Charlie8 DNA MER1_type -2153 264 106 558 241 48 0 chr17 41091225 41091391 -48413162 - L1MC4a LINE L1 -1870 5938 5765 626 141 0 20 chr17 41091415 41091514 -48413039 + AluJ/FLAM SINE Alu 6 102 -210 301 270 113 62 chr17 41091917 41092272 -48412281 + L2 LINE L2 2898 3270 -2 197 225 125 62 chr17 41093042 41093122 -48411431 + MIR3 SINE MIR 76 160 -48 2175 89 14 0 chr17 41093124 41093415 -48411138 - AluY SINE Alu -16 295 1 2334 60 0 0 chr17 41093422 41093739 -48410814 - AluY SINE Alu 0 317 1 2185 96 0 16 chr17 41093739 41094042 -48410511 - AluSg SINE Alu -12 298 1 625 279 34 6 chr17 41094144 41094323 -48410230 - MIR SINE MIR -51 211 28 887 304 97 19 chr17 41094481 41094892 -48409661 - L3 LINE CR1 -5 1572 1130 270 262 25 66 chr17 41095962 41096084 -48408469 + MIR3 SINE MIR 44 160 -48 305 255 85 0 chr17 41096107 41096186 -48408367 + MIR SINE MIR 136 228 -34 2171 125 0 3 chr17 41096186 41096498 -48408055 + AluSq SINE Alu 1 311 -2 305 255 85 0 chr17 41096498 41096524 -48408029 + MIR SINE MIR 228 250 -12 936 205 0 21 chr17 41096528 41096718 -48407835 - AluJb SINE Alu -6 306 121 23 33 0 0 chr17 41096740 41096770 -48407783 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 41098891 41098912 -48405641 + GC_rich Low_complexity Low_complexity 1 21 0 212 358 16 32 chr17 41099134 41099257 -48405296 - L2 LINE L2 -547 2767 2647 1616 178 10 23 chr17 41099345 41099476 -48405077 + AluJb SINE Alu 1 132 -180 2152 100 21 3 chr17 41099476 41099765 -48404788 + AluSg SINE Alu 1 294 -16 1616 178 10 23 chr17 41099765 41099937 -48404616 + AluJb SINE Alu 132 300 -12 790 167 0 62 chr17 41099966 41099995 -48404558 + MIR SINE MIR 4 33 -229 2306 87 3 0 chr17 41099995 41100293 -48404260 + AluY SINE Alu 1 299 -12 790 167 0 62 chr17 41100293 41100425 -48404128 + MIR SINE MIR 33 155 -107 2045 90 83 0 chr17 41100525 41100813 -48403740 + AluSx SINE Alu 1 312 0 2043 142 3 19 chr17 41100827 41101144 -48403409 + AluSx SINE Alu 1 312 0 395 244 73 41 chr17 41101250 41101373 -48403180 - MIR SINE MIR -59 203 77 2325 97 3 0 chr17 41101411 41101719 -48402834 + AluSx SINE Alu 1 309 -3 222 305 86 52 chr17 41101772 41101946 -48402607 - L2 LINE L2 -92 3221 3042 279 0 0 0 chr17 41102237 41102268 -48402285 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr17 41102466 41102487 -48402066 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 303 93 0 0 chr17 41103436 41103479 -48401074 + (TG)n Simple_repeat Simple_repeat 1 43 0 348 217 200 42 chr17 41105040 41105160 -48399393 - MIR SINE MIR -71 191 53 2032 113 30 0 chr17 41105179 41105479 -48399074 + AluSx SINE Alu 1 309 -3 409 348 55 6 chr17 41105519 41105700 -48398853 - L2 LINE L2 -5 3308 3119 322 235 76 17 chr17 41105727 41105846 -48398707 - MIR SINE MIR -109 153 28 2179 114 7 0 chr17 41106432 41106740 -48397813 - AluSp SINE Alu 0 313 4 191 289 53 0 chr17 41106740 41106816 -48397737 + MIR SINE MIR 65 144 -118 226 118 98 0 chr17 41106971 41107022 -48397531 + MER53 DNA DNA 1 56 -133 1961 114 37 10 chr17 41107027 41107326 -48397227 - AluSx SINE Alu -1 311 5 2030 130 3 13 chr17 41107328 41107629 -48396924 - AluSx SINE Alu -13 299 2 1703 179 0 10 chr17 41107643 41107940 -48396613 - AluJo SINE Alu -13 299 6 21 36 0 0 chr17 41107944 41107972 -48396581 + AT_rich Low_complexity Low_complexity 1 28 0 828 88 0 0 chr17 41107973 41108086 -48396467 + AluSg/x SINE Alu 190 302 -8 539 171 9 0 chr17 41108087 41108198 -48396355 + MER53 DNA DNA 73 184 -5 224 326 22 11 chr17 41108401 41108490 -48396063 - L2 LINE L2 -527 2787 2698 1841 60 0 21 chr17 41108502 41108737 -48395816 + AluY SINE Alu 1 230 -81 1384 73 17 0 chr17 41108737 41108916 -48395637 + AluSp SINE Alu 87 268 -45 2109 117 0 3 chr17 41108931 41109230 -48395323 + AluSx SINE Alu 1 298 -14 2351 90 0 0 chr17 41109729 41110039 -48394514 + AluSg SINE Alu 1 310 0 505 255 224 10 chr17 41111453 41111645 -48392908 - MIR SINE MIR -6 256 24 1142 114 13 0 chr17 41111913 41112071 -48392482 - AluSq SINE Alu -20 293 134 2172 84 20 7 chr17 41112071 41112370 -48392183 - AluY SINE Alu -8 303 1 543 242 54 7 chr17 41112370 41112519 -48392034 - MIR3 SINE MIR -12 196 41 2319 80 7 3 chr17 41113209 41113511 -48391042 - AluSg SINE Alu -7 303 1 2040 118 6 22 chr17 41114089 41114403 -48390150 + AluSx SINE Alu 1 309 -3 2209 97 13 0 chr17 41115105 41115405 -48389148 + AluSg SINE Alu 1 304 -6 21 36 0 0 chr17 41115858 41115886 -48388667 + AT_rich Low_complexity Low_complexity 1 28 0 561 244 47 0 chr17 41116219 41116346 -48388207 - FLAM_A SINE Alu 0 133 1 1951 123 3 20 chr17 41116403 41116704 -48387849 - AluSg SINE Alu -14 296 1 24 0 0 0 chr17 41116707 41116731 -48387822 + AT_rich Low_complexity Low_complexity 1 24 0 1644 117 4 0 chr17 41116749 41116979 -48387574 + AluSx SINE Alu 1 231 -81 245 279 36 18 chr17 41117007 41117118 -48387435 - L1M4 LINE L1 -1107 5039 4927 472 87 22 87 chr17 41117119 41117211 -48387342 - AluSp/q SINE Alu -7 306 221 1805 123 9 72 chr17 41117437 41117578 -48386975 + AluSq SINE Alu 3 151 -162 2067 96 0 0 chr17 41117578 41117850 -48386703 + AluSc SINE Alu 1 272 -37 246 32 0 0 chr17 41117852 41117883 -48386670 + (CAA)n Simple_repeat Simple_repeat 1 31 0 1805 123 9 72 chr17 41117883 41118070 -48386483 + AluSq SINE Alu 152 313 0 577 265 111 16 chr17 41118561 41118750 -48385803 - MIR SINE MIR -49 213 7 35 24 0 0 chr17 41119188 41119230 -48385323 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr17 41119276 41119297 -48385256 + AT_rich Low_complexity Low_complexity 1 21 0 1913 83 112 7 chr17 41120515 41120791 -48383762 - AluSg SINE Alu -5 305 1 224 209 0 0 chr17 41122567 41122610 -48381943 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 206 170 43 0 chr17 41123045 41123092 -48381461 + GA-rich Low_complexity Low_complexity 4 52 0 2324 65 10 0 chr17 41126179 41126470 -48378083 - AluSg SINE Alu -16 294 1 757 116 39 39 chr17 41126713 41126842 -48377711 + AluJo/FLAM SINE Alu 2 130 -172 1614 106 122 4 chr17 41126843 41127097 -48377456 + AluSx SINE Alu 28 311 -1 203 161 18 0 chr17 41127950 41128006 -48376547 + (CGG)n Simple_repeat Simple_repeat 2 58 0 24 32 0 0 chr17 41128833 41128864 -48375689 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr17 41131264 41131288 -48373265 + AT_rich Low_complexity Low_complexity 1 24 0 2364 87 0 7 chr17 41131294 41131594 -48372959 + AluSg SINE Alu 1 298 -12 2125 73 13 57 chr17 41131967 41132281 -48372272 - AluSg SINE Alu -10 300 1 358 262 11 0 chr17 41132288 41132395 -48372158 - MIR SINE MIR -49 159 51 417 203 40 0 chr17 41132523 41132597 -48371956 - AluJ/FLAM SINE Alu -224 78 2 1022 107 43 0 chr17 41133061 41133201 -48371352 + AluSq/x SINE Alu 1 146 -166 2486 70 0 7 chr17 41133290 41133592 -48370961 - AluY SINE Alu -10 301 2 279 295 54 72 chr17 41133593 41133647 -48370906 + MIR3 SINE MIR 45 98 -110 2358 114 0 0 chr17 41133647 41133953 -48370600 - AluSq SINE Alu -7 306 1 279 295 54 72 chr17 41133953 41134064 -48370489 + MIR3 SINE MIR 98 207 -1 2284 104 3 0 chr17 41134825 41135124 -48369429 - AluSx SINE Alu -12 300 1 2137 123 20 0 chr17 41135408 41135710 -48368843 + AluSx SINE Alu 1 308 -4 2228 54 22 18 chr17 41135712 41135988 -48368565 + AluY SINE Alu 23 299 -12 29 0 0 0 chr17 41136931 41136960 -48367593 + AT_rich Low_complexity Low_complexity 1 29 0 2227 104 10 0 chr17 41136960 41137259 -48367294 - AluSq SINE Alu -11 302 1 1784 124 76 4 chr17 41137261 41137536 -48367017 - AluSp SINE Alu -18 295 1 2157 133 7 0 chr17 41137801 41138109 -48366444 - AluSx SINE Alu -2 310 1 1898 132 34 3 chr17 41138110 41138405 -48366148 - AluSg SINE Alu -6 304 1 772 139 7 49 chr17 41138983 41139127 -48365426 - FLAM_C SINE Alu 0 143 6 2040 126 11 0 chr17 41139215 41139500 -48365053 - AluSg1 SINE Alu -21 288 1 1694 148 61 11 chr17 41139531 41139688 -48364865 - AluJb SINE Alu -21 291 113 2300 92 0 20 chr17 41139688 41139992 -48364561 - AluSx SINE Alu -14 298 1 1694 148 61 11 chr17 41139992 41140111 -48364442 - AluJb SINE Alu -199 113 1 2191 114 0 0 chr17 41140424 41140730 -48363823 - AluY SINE Alu 0 306 1 2489 78 0 7 chr17 41141137 41141446 -48363107 - AluSq SINE Alu -5 308 2 2492 66 0 10 chr17 41141486 41141791 -48362762 + AluSc SINE Alu 2 303 -6 1792 179 0 10 chr17 41141796 41142092 -48362461 - AluSx SINE Alu -19 293 1 1720 165 37 48 chr17 41142324 41142389 -48362164 - MER47A DNA MER2_type -1976 347 283 2094 147 0 0 chr17 41142389 41142688 -48361865 + AluJo SINE Alu 1 299 -13 2369 84 3 0 chr17 41142692 41142989 -48361564 + AluSq SINE Alu 5 302 -11 1720 165 37 48 chr17 41142989 41143269 -48361284 - MER47A DNA MER2_type -2043 280 1 22 0 0 0 chr17 41143615 41143637 -48360916 + AT_rich Low_complexity Low_complexity 1 22 0 1976 124 21 3 chr17 41143637 41143920 -48360633 - AluSx SINE Alu -24 288 1 1450 127 147 4 chr17 41143935 41144203 -48360350 - AluSg1 SINE Alu 0 304 2 2366 88 14 0 chr17 41144221 41144517 -48360036 - AluSc SINE Alu -9 300 1 397 148 0 0 chr17 41144937 41145005 -48359548 - AluJ/FRAM SINE Alu -13 289 228 976 178 0 0 chr17 41145039 41145196 -48359357 - FRAM SINE Alu -24 152 1 1999 103 40 26 chr17 41145290 41145592 -48358961 - AluSg SINE Alu -4 306 1 35 54 0 22 chr17 41145685 41145722 -48358831 + AT_rich Low_complexity Low_complexity 1 37 -53 2131 124 3 0 chr17 41145722 41146021 -48358532 - AluSc SINE Alu -9 300 1 1614 199 7 3 chr17 41146023 41146315 -48358238 - AluJo SINE Alu -19 293 1 35 54 0 22 chr17 41146315 41146366 -48358187 + AT_rich Low_complexity Low_complexity 38 90 0 2426 77 3 3 chr17 41146377 41146676 -48357877 + AluSx SINE Alu 1 299 -13 591 263 8 0 chr17 41146794 41146927 -48357626 - FLAM_C SINE Alu -8 135 2 2314 97 0 26 chr17 41147081 41147392 -48357161 - AluSc SINE Alu -6 303 1 1269 196 25 45 chr17 41147428 41147714 -48356839 - AluJo SINE Alu -30 282 3 2396 80 0 0 chr17 41147804 41148105 -48356448 - AluY SINE Alu -10 301 1 2208 97 7 3 chr17 41148152 41148452 -48356101 - AluSc SINE Alu -8 301 1 1776 173 3 10 chr17 41148452 41148747 -48355806 - AluJb SINE Alu -8 304 12 1843 146 20 20 chr17 41148767 41149069 -48355484 - AluJo SINE Alu -10 302 1 2248 105 0 0 chr17 41149093 41149389 -48355164 - AluSq SINE Alu -17 296 1 848 280 78 77 chr17 41149466 41150253 -48354300 - L2 LINE L2 -4 3309 2519 1345 136 0 126 chr17 41150277 41150460 -48354093 - AluJo SINE Alu -20 292 158 1698 183 13 7 chr17 41150460 41150766 -48353787 - AluJo SINE Alu -4 308 1 1345 136 0 126 chr17 41150766 41150876 -48353677 - AluJo SINE Alu -154 158 36 1094 148 21 160 chr17 41150882 41151029 -48353524 - L1M3 LINE L1 -561 5610 5444 2240 72 58 0 chr17 41151029 41151321 -48353232 - AluSp SINE Alu -4 309 1 1094 148 21 160 chr17 41151321 41151356 -48353197 - L1M3 LINE L1 -727 5444 5406 2344 88 0 3 chr17 41151356 41151652 -48352901 + AluSx SINE Alu 1 295 -17 1094 148 21 160 chr17 41151652 41151806 -48352747 - L1M3 LINE L1 -765 5406 5320 585 244 31 0 chr17 41151808 41151935 -48352618 - FLAM_A SINE Alu -7 135 5 381 101 58 0 chr17 41151939 41152008 -48352545 - L1M LINE L1 -2457 5328 5256 722 149 88 41 chr17 41152028 41152222 -48352331 - L1M4 LINE L1 -5458 1084 882 1337 176 64 22 chr17 41152257 41152395 -48352158 - AluJo SINE Alu -32 280 149 5252 67 17 31 chr17 41152395 41152464 -48352089 - LTR8 LTR ERV1 0 691 623 2521 52 0 10 chr17 41152464 41152773 -48351780 + AluY SINE Alu 1 306 -5 5252 67 17 31 chr17 41152773 41153404 -48351149 - LTR8 LTR ERV1 -68 623 1 1337 176 64 22 chr17 41153404 41153532 -48351021 - AluJo SINE Alu -163 149 3 2881 216 104 50 chr17 41153534 41154119 -48350434 - L1M4 LINE L1 -5650 892 340 2196 95 0 3 chr17 41154119 41154429 -48350124 - AluSg SINE Alu 0 309 1 2881 216 104 50 chr17 41154429 41154595 -48349958 - L1M4 LINE L1 -6202 340 184 1435 128 49 8 chr17 41154595 41154838 -48349715 - L1MA4A LINE L1 -11 6292 6040 2881 216 104 50 chr17 41154838 41154930 -48349623 - L1M4 LINE L1 -6358 184 1 2274 82 4 0 chr17 41155182 41155461 -48349092 + AluSc SINE Alu 1 280 -29 195 42 0 0 chr17 41155464 41155488 -48349065 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 1947 137 0 39 chr17 41155714 41156020 -48348533 - AluSx SINE Alu -18 294 1 2161 117 3 10 chr17 41156020 41156327 -48348226 - AluSq SINE Alu -8 305 1 2193 97 7 36 chr17 41157342 41157650 -48346903 + AluSq SINE Alu 1 299 -14 2483 72 3 0 chr17 41157724 41158028 -48346525 - AluSc SINE Alu -4 305 1 301 305 59 64 chr17 41158144 41158331 -48346222 + HAL1 LINE L1 154 339 -2168 1318 106 0 0 chr17 41158439 41158609 -48345944 + AluSg/x SINE Alu 132 301 -9 22 0 0 0 chr17 41158907 41158929 -48345624 + AT_rich Low_complexity Low_complexity 1 22 0 1965 114 53 0 chr17 41159049 41159330 -48345223 - AluSp SINE Alu -17 296 1 2768 16 0 29 chr17 41159446 41159762 -48344791 - AluY SINE Alu -4 307 1 1994 138 3 3 chr17 41159762 41160058 -48344495 - AluSx SINE Alu -16 296 1 776 206 0 61 chr17 41160140 41160320 -48344233 - FRAM SINE Alu -14 162 1 1295 205 61 4 chr17 41160333 41160611 -48343942 + AluJo SINE Alu 1 294 -18 1143 95 0 7 chr17 41160616 41160763 -48343790 + AluSg SINE Alu 1 146 -164 1787 109 24 0 chr17 41160763 41161010 -48343543 + AluSg SINE Alu 51 303 -7 189 352 16 32 chr17 41161013 41161138 -48343415 - L3 LINE CR1 -822 755 633 2274 102 0 0 chr17 41161315 41161618 -48342935 + AluY SINE Alu 4 306 -5 1904 157 0 10 chr17 41161867 41162160 -48342393 - AluJo SINE Alu -22 290 1 1687 132 13 72 chr17 41162189 41162493 -48342060 + AluSx SINE Alu 1 286 -26 24 85 0 0 chr17 41162493 41162552 -48342001 + AT_rich Low_complexity Low_complexity 1 59 0 1333 269 141 26 chr17 41162597 41162652 -48341901 + HAL1 LINE L1 1154 1201 -1306 2295 128 0 0 chr17 41162652 41162958 -48341595 + AluSx SINE Alu 3 308 -4 1333 269 141 26 chr17 41162958 41163084 -48341469 + HAL1 LINE L1 1201 1311 -1196 2284 100 3 3 chr17 41163084 41163384 -48341169 + AluY SINE Alu 1 300 -11 1333 269 141 26 chr17 41163384 41163923 -48340630 + HAL1 LINE L1 1311 1958 -549 644 196 196 0 chr17 41164126 41164269 -48340284 + FAM SINE Alu 1 171 -4 228 163 23 0 chr17 41165308 41165351 -48339202 - MLT1H LTR MaLR -15 580 537 900 227 32 106 chr17 41165413 41165634 -48338919 - MLT1H LTR MaLR -185 364 177 1744 172 13 3 chr17 41165634 41165936 -48338617 - AluJb SINE Alu -7 305 1 900 227 32 106 chr17 41165936 41166062 -48338491 - MLT1H LTR MaLR -372 177 43 2307 108 0 7 chr17 41166078 41166383 -48338170 + AluSx SINE Alu 3 305 -7 1697 177 23 16 chr17 41166426 41166736 -48337817 - AluJb SINE Alu 0 312 1 921 121 0 29 chr17 41166810 41166950 -48337603 + FLAM_C SINE Alu 1 136 -7 2083 81 7 48 chr17 41166953 41167275 -48337278 + AluSp SINE Alu 1 310 0 2143 108 14 10 chr17 41167349 41167645 -48336908 + AluSx SINE Alu 1 297 -15 1584 72 5 0 chr17 41167645 41167837 -48336716 + AluSp SINE Alu 1 194 -119 705 173 0 0 chr17 41167838 41167948 -48336605 - AluJo/FLAM SINE Alu -201 111 2 2370 76 0 20 chr17 41167958 41168261 -48336292 - AluY SINE Alu -14 297 1 701 176 0 8 chr17 41168332 41168451 -48336102 - FLAM_C SINE Alu -24 119 2 2333 93 0 0 chr17 41168461 41168751 -48335802 - AluY SINE Alu -21 290 1 608 257 43 11 chr17 41168944 41169168 -48335385 + MLT2E LTR ERVL 343 628 0 234 290 30 38 chr17 41169169 41169300 -48335253 + MST-int LTR MaLR 3 132 -1519 918 291 99 12 chr17 41169448 41169792 -48334761 - MLT2E LTR ERVL -254 374 1 1672 168 94 13 chr17 41169856 41170237 -48334316 - L1MB3 LINE L1 -9 6174 5763 * 2138 172 58 72 chr17 41170221 41170649 -48333904 - L1ME1 LINE L1 -237 5929 5496 1847 90 86 0 chr17 41170649 41170904 -48333649 - AluSq SINE Alu -16 297 21 2138 172 58 72 chr17 41170904 41170916 -48333637 - L1ME1 LINE L1 -670 5496 5485 1405 144 50 77 chr17 41170916 41171215 -48333338 - AluSx SINE Alu -21 291 1 2138 172 58 72 chr17 41171215 41171523 -48333030 - L1ME1 LINE L1 -681 5485 5180 2230 126 3 0 chr17 41171556 41171866 -48332687 - AluSx SINE Alu -1 311 1 2067 169 11 49 chr17 41171866 41172328 -48332225 + MLT2B2 LTR ERVL 15 514 -1 477 199 125 97 chr17 41172332 41172548 -48332005 + L1MCa LINE L1 1738 2033 -4467 780 163 39 13 chr17 41172559 41172712 -48331841 + FRAM SINE Alu 1 156 -20 1458 202 29 101 chr17 41172837 41172973 -48331580 + L1M4 LINE L1 4764 4908 -1238 2316 90 7 7 chr17 41172973 41173274 -48331279 - AluSp SINE Alu -12 301 1 1458 202 29 101 chr17 41173274 41173303 -48331250 + L1M4 LINE L1 4908 4938 -1208 1806 161 3 30 chr17 41173303 41173601 -48330952 + AluJb SINE Alu 1 290 -22 1762 199 0 0 chr17 41173611 41173902 -48330651 + AluJb SINE Alu 1 291 -21 1458 202 29 101 chr17 41173902 41174030 -48330523 + L1M4 LINE L1 4947 5083 -1063 2319 99 0 3 chr17 41174030 41174333 -48330220 - AluSg SINE Alu -8 302 1 1458 202 29 101 chr17 41174333 41174387 -48330166 + L1M4 LINE L1 5083 5139 -1007 2515 75 3 0 chr17 41174387 41174693 -48329860 - AluSq SINE Alu -6 307 1 1458 202 29 101 chr17 41174693 41174846 -48329707 + L1M4 LINE L1 5139 5241 -905 288 164 0 6 chr17 41174868 41174932 -48329621 + Alu SINE Alu 1 43 -260 456 154 13 0 chr17 41174932 41175010 -48329543 - AluJ/FLAM SINE Alu -221 91 13 2162 109 3 3 chr17 41175035 41175344 -48329209 + AluSq SINE Alu 1 309 0 21 0 0 0 chr17 41175517 41175538 -48329015 + AT_rich Low_complexity Low_complexity 1 21 0 290 306 27 18 chr17 41175661 41175772 -48328781 - L2 LINE L2 -12 3260 3149 309 252 209 7 chr17 41176047 41176186 -48328367 - MER104 DNA Tc2 0 180 14 766 110 15 52 chr17 41176189 41176325 -48328228 - L1MB2 LINE L1 -10 6161 6031 2271 89 0 11 chr17 41176343 41176667 -48327886 + AluSc SINE Alu 1 321 0 1550 154 140 0 chr17 41176672 41176965 -48327588 - MER44D DNA MER2_type -1 608 5 1106 278 98 12 chr17 41177033 41177440 -48327113 - MLT1J LTR MaLR -13 498 57 2114 132 10 3 chr17 41177556 41177866 -48326687 - AluSx SINE Alu 0 312 1 704 183 8 0 chr17 41177892 41178018 -48326535 - FLAM_A SINE Alu -6 127 1 2355 98 0 3 chr17 41178907 41179214 -48325339 - AluSq SINE Alu -7 306 1 582 229 10 90 chr17 41179318 41179519 -48325034 - MER5A DNA MER1_type -3 186 2 1963 128 37 0 chr17 41179750 41180048 -48324505 - AluSp SINE Alu -2 311 3 522 77 0 135 chr17 41180259 41180315 -48324238 - MER46B DNA MER2_type -2673 58 145 2564 57 0 0 chr17 41180315 41180612 -48323941 - AluY SINE Alu -14 297 1 522 77 0 135 chr17 41180612 41180659 -48323894 - MER46B DNA MER2_type -2585 146 94 741 253 6 0 chr17 41180659 41180825 -48323728 - AluJb SINE Alu -9 303 137 312 137 20 0 chr17 41180825 41180876 -48323677 + Tigger4(Zombi) DNA MER2_type 45 96 -2635 459 107 0 0 chr17 41180914 41180989 -48323564 - Alu SINE Alu -2 308 234 2278 120 0 0 chr17 41180989 41181297 -48323256 - AluSx SINE Alu -4 308 1 1520 180 19 0 chr17 41181297 41181553 -48323000 + AluJo SINE Alu 26 286 -26 202 320 13 13 chr17 41181598 41181676 -48322877 + L3 LINE CR1 1122 1199 -378 699 179 0 0 chr17 41181677 41181789 -48322764 + AluJo/FLAM SINE Alu 3 114 -198 2431 77 3 0 chr17 41181789 41182086 -48322467 - AluSc SINE Alu -11 298 1 333 26 0 0 chr17 41182109 41182147 -48322406 - MER4E LTR ERV1 -76 690 653 7568 37 5 1 chr17 41182280 41183571 -48320982 + L1PA5 LINE L1 4859 6151 -3 1594 161 3 64 chr17 41183916 41184227 -48320326 - AluJo SINE Alu -20 292 1 417 107 0 0 chr17 41184228 41184284 -48320269 - AluJb SINE Alu -167 145 90 262 330 33 0 chr17 41184290 41184381 -48320172 - L2 LINE L2 -19 3253 3160 2051 134 10 0 chr17 41184426 41184716 -48319837 + AluSq SINE Alu 1 293 -20 224 294 159 16 chr17 41184998 41185124 -48319429 + L2 LINE L2 3164 3307 -6 1901 150 0 19 chr17 41185449 41185763 -48318790 - AluSx SINE Alu -4 308 1 1052 195 0 10 chr17 41185900 41186105 -48318448 - AluJb SINE Alu -14 298 96 2176 124 0 3 chr17 41186105 41186404 -48318149 + AluSg1 SINE Alu 1 298 -11 1242 132 0 0 chr17 41186404 41186571 -48317982 + AluSg/x SINE Alu 134 300 -12 642 191 0 0 chr17 41186575 41186680 -48317873 - AluJ SINE Alu -205 107 3 248 266 202 0 chr17 41186708 41186802 -48317751 + MIR SINE MIR 122 234 -28 1797 156 0 56 chr17 41187365 41187534 -48317019 - AluJb SINE Alu -10 302 158 2410 70 0 7 chr17 41187534 41187833 -48316720 - AluY SINE Alu -14 297 1 1797 156 0 56 chr17 41187833 41187983 -48316570 - AluJb SINE Alu -154 158 1 255 310 103 9 chr17 41188173 41188289 -48316264 - L2 LINE L2 -592 2722 2596 291 297 0 0 chr17 41188571 41188645 -48315908 - MLT1I LTR MaLR -268 141 68 922 179 52 107 chr17 41189585 41189741 -48314812 - L1MC4a LINE L1 0 7808 7645 1912 93 48 48 chr17 41189741 41189872 -48314681 + AluSx SINE Alu 5 135 -177 2271 89 3 0 chr17 41189872 41190164 -48314389 + AluSg SINE Alu 1 293 -17 1912 93 48 48 chr17 41190164 41190322 -48314231 + AluSx SINE Alu 134 294 -18 2073 68 39 25 chr17 41190330 41190609 -48313944 + AluSc SINE Alu 10 292 -17 922 179 52 107 chr17 41190609 41190734 -48313819 - L1MC4a LINE L1 -170 7638 7534 983 234 10 0 chr17 41190808 41191005 -48313548 - AluJb SINE Alu -38 274 76 282 111 0 153 chr17 41191008 41191080 -48313473 - AluJo SINE Alu -159 143 83 2004 135 7 3 chr17 41191080 41191368 -48313185 - AluSx SINE Alu -9 303 15 1399 217 97 50 chr17 41191382 41191702 -48312851 - L1MC4a LINE L1 -319 7489 7185 7153 51 29 21 chr17 41191702 41193321 -48311232 - SVA Other Other -723 1386 1 1399 217 97 50 chr17 41193321 41193416 -48311137 - L1MC4a LINE L1 -623 7185 7096 2283 117 0 0 chr17 41193416 41193723 -48310830 - AluSg SINE Alu -3 307 1 1399 217 97 50 chr17 41193723 41193863 -48310690 - L1MC4a LINE L1 -712 7096 6906 195 42 0 0 chr17 41194125 41194149 -48310404 + (TCCCC)n Simple_repeat Simple_repeat 1 24 0 1135 185 122 20 chr17 41194154 41194408 -48310145 - AluJo SINE Alu -32 280 1 1506 87 5 5 chr17 41194659 41194855 -48309698 - AluSg/x SINE Alu -5 305 110 3672 87 6 2 chr17 41194863 41195348 -48309205 - LTR15 LTR ERV1 -6 487 1 833 108 0 0 chr17 41195348 41195459 -48309094 - AluYb8 SINE Alu -207 111 1 10419 69 17 8 chr17 41195774 41197093 -48307460 - SVA Other Other 0 1386 57 287 24 0 24 chr17 41197096 41197137 -48307416 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 635 215 23 0 chr17 41197168 41197298 -48307255 + FLAM_A SINE Alu 1 133 0 1417 206 14 24 chr17 41197316 41197426 -48307127 - MER68 LTR ERV1 0 562 452 2445 79 3 0 chr17 41197426 41197730 -48306823 + AluY SINE Alu 1 305 -6 1417 206 14 24 chr17 41197730 41197906 -48306647 - MER68 LTR ERV1 -110 452 279 778 165 31 0 chr17 41197896 41198023 -48306530 - MER68 LTR ERV1 -431 131 1 * 226 224 0 20 chr17 41198155 41198204 -48306349 + MIR SINE MIR 8 55 -207 358 217 0 0 chr17 41198315 41198384 -48306169 + MLT1A1 LTR MaLR 293 361 -4 393 318 91 48 chr17 41198585 41198837 -48305716 - L2 LINE L2 -13 3259 2997 357 123 0 77 chr17 41198837 41198866 -48305687 + AluJb SINE Alu 109 132 -170 1936 153 20 0 chr17 41198866 41199166 -48305387 + AluSx SINE Alu 1 306 -6 357 123 0 77 chr17 41199166 41199201 -48305352 + AluJb SINE Alu 132 168 -134 2177 122 0 3 chr17 41199647 41199935 -48304618 - AluSx SINE Alu -25 287 1 2212 115 3 16 chr17 41199940 41200252 -48304301 - AluSx SINE Alu 0 312 5 1780 184 14 3 chr17 41200258 41200551 -48304002 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 41200564 41201202 -48303351 - L1MC4 LINE L1 -141 7901 7253 1525 194 14 7 chr17 41201202 41201496 -48303057 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 41201496 41201990 -48302563 - L1MC4 LINE L1 -789 7253 6790 2493 77 3 3 chr17 41201990 41202301 -48302252 - AluSq SINE Alu -2 311 1 4158 195 57 75 chr17 41202301 41202395 -48302158 - L1MC4 LINE L1 -1252 6790 6696 1374 90 0 0 chr17 41202399 41202576 -48301977 + AluY SINE Alu 133 309 -2 729 219 153 29 chr17 41202748 41203019 -48301534 - L1MD3 LINE L1 -1223 6585 6296 250 309 0 0 chr17 41203026 41203081 -48301472 + AluJo SINE Alu 1 55 -247 2043 142 3 16 chr17 41203081 41203384 -48301169 + AluSx SINE Alu 1 299 -13 1498 156 0 39 chr17 41203384 41203638 -48300915 + AluJo SINE Alu 44 289 -23 1329 171 0 9 chr17 41203638 41203860 -48300693 - AluJb SINE Alu -23 289 70 2233 169 54 10 chr17 41203987 41204395 -48300158 - MSTB LTR MaLR 0 426 1 792 252 192 9 chr17 41204425 41204742 -48299811 - L1ME LINE L1 -5520 550 176 541 279 29 0 chr17 41204747 41204883 -48299670 - L1ME LINE L1 -5925 145 6 334 231 33 50 chr17 41204888 41205009 -48299544 - L1MC4a LINE L1 -1639 6169 6051 1757 162 14 14 chr17 41205055 41205345 -48299208 - AluJb SINE Alu -22 290 1 2153 99 20 7 chr17 41205683 41205976 -48298577 + AluSx SINE Alu 1 297 -15 471 245 49 28 chr17 41205976 41206119 -48298434 - MER5A DNA MER1_type -32 157 12 2204 62 26 49 chr17 41206188 41206493 -48298060 + AluSg SINE Alu 1 298 -12 2491 71 3 0 chr17 41206998 41207295 -48297258 + AluY SINE Alu 1 298 -13 1394 91 0 0 chr17 41207295 41207471 -48297082 + AluY SINE Alu 133 308 -3 33 0 0 0 chr17 41207762 41207795 -48296758 + AT_rich Low_complexity Low_complexity 1 33 0 581 168 134 17 chr17 41208088 41208207 -48296346 - FLAM_C SINE Alu 0 133 1 2448 94 0 7 chr17 41208463 41208771 -48295782 - AluSq SINE Alu -7 306 1 2065 111 3 44 chr17 41208780 41209095 -48295458 - AluSg SINE Alu -8 302 1 1815 167 31 3 chr17 41209380 41209674 -48294879 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr17 41209972 41209993 -48294560 + AT_rich Low_complexity Low_complexity 1 21 0 731 167 14 29 chr17 41210356 41210494 -48294059 + FLAM_C SINE Alu 2 137 -6 2081 113 38 0 chr17 41210570 41210862 -48293691 - AluSg SINE Alu -7 303 1 2224 104 3 0 chr17 41211009 41211298 -48293255 - AluSg SINE Alu -20 290 1 2216 93 3 10 chr17 41211496 41211808 -48292745 - AluSp SINE Alu 0 313 1 232 100 0 0 chr17 41211815 41211855 -48292698 - L1MB3 LINE L1 0 6183 6144 233 260 96 0 chr17 41212071 41212144 -48292409 - L1MC5 LINE L1 -62 7899 7820 2532 61 3 0 chr17 41212267 41212577 -48291976 + AluY SINE Alu 1 311 0 344 284 61 72 chr17 41212622 41212737 -48291816 - L1M4 LINE L1 -1300 4846 4731 2130 114 0 0 chr17 41212737 41213018 -48291535 + AluSg SINE Alu 1 281 -29 344 284 61 72 chr17 41213018 41213264 -48291289 - L1M4 LINE L1 -1415 4731 4489 2046 101 0 20 chr17 41213265 41213563 -48290990 - AluSx SINE Alu -20 292 1 2088 228 98 20 chr17 41213586 41213951 -48290602 - L1MC4 LINE L1 -962 7080 6656 201 74 0 0 chr17 41213951 41213978 -48290575 + (TG)n Simple_repeat Simple_repeat 2 28 0 2088 228 98 20 chr17 41213978 41214161 -48290392 - L1MC4 LINE L1 -1386 6656 6489 728 248 26 0 chr17 41214169 41214322 -48290231 - FRAM SINE Alu -16 160 4 519 31 0 0 chr17 41214395 41214460 -48290093 + (TC)n Simple_repeat Simple_repeat 1 65 0 180 0 0 0 chr17 41214853 41214873 -48289680 + (TA)n Simple_repeat Simple_repeat 1 20 0 744 138 109 0 chr17 41214936 41215075 -48289478 + L1MB7 LINE L1 5357 5511 -667 709 84 0 0 chr17 41215075 41215170 -48289383 + AluSq/x SINE Alu 42 136 -176 2276 111 3 7 chr17 41215170 41215476 -48289077 + AluSx SINE Alu 1 305 -7 527 186 0 93 chr17 41215476 41215605 -48288948 + L1MB7 LINE L1 5506 5622 -552 1671 149 16 58 chr17 41215606 41215915 -48288638 + AluSx SINE Alu 1 296 -16 2012 152 77 12 chr17 41215916 41216318 -48288235 + L1MB7 LINE L1 5715 6142 -42 2351 99 3 0 chr17 41216332 41216635 -48287918 + AluSp SINE Alu 1 304 -9 2238 112 3 6 chr17 41216734 41217047 -48287506 + AluSx SINE Alu 1 312 0 2258 111 0 0 chr17 41217050 41217348 -48287205 + AluSg SINE Alu 1 298 -12 2410 72 3 13 chr17 41217391 41217698 -48286855 + AluY SINE Alu 1 304 -7 2217 103 3 0 chr17 41217840 41218132 -48286421 - AluSg SINE Alu -17 293 1 480 145 63 138 chr17 41219017 41219078 -48285475 - LTR45B LTR ERV1 0 489 425 1706 168 7 32 chr17 41219078 41219253 -48285300 - AluJo SINE Alu -6 306 141 2216 116 3 10 chr17 41219253 41219563 -48284990 - AluSx SINE Alu -4 308 1 1706 168 7 32 chr17 41219563 41219696 -48284857 - AluJo SINE Alu -171 141 6 480 145 63 138 chr17 41219696 41219793 -48284760 - LTR45B LTR ERV1 -64 425 343 1694 148 29 35 chr17 41220089 41220400 -48284153 - AluJb SINE Alu -3 309 1 1758 115 43 0 chr17 41220408 41220699 -48283854 - AluSx SINE Alu 0 349 48 337 123 15 15 chr17 41220699 41220764 -48283789 + AluSp/q SINE Alu 239 303 0 1673 152 68 13 chr17 41220940 41221250 -48283303 - LTR49-int LTR ERV1 -651 5680 5354 573 115 13 0 chr17 41221250 41221328 -48283225 + AluSg/x SINE Alu 115 193 -119 25 53 0 18 chr17 41221380 41221402 -48283151 + AT_rich Low_complexity Low_complexity 1 22 -34 2303 95 0 3 chr17 41221402 41221698 -48282855 + AluY SINE Alu 1 295 -16 25 53 0 18 chr17 41221698 41221732 -48282821 + AT_rich Low_complexity Low_complexity 22 56 0 1360 192 0 88 chr17 41221755 41221989 -48282564 - AluJo SINE Alu -13 299 101 854 158 0 0 chr17 41221989 41222122 -48282431 + FLAM_C SINE Alu 1 133 0 1360 192 0 88 chr17 41222122 41222215 -48282338 - AluJo SINE Alu -211 101 1 2228 119 0 3 chr17 41222277 41222579 -48281974 - AluSx SINE Alu -11 301 1 480 229 15 46 chr17 41222621 41222752 -48281801 + MIR SINE MIR 120 246 -16 364 273 150 20 chr17 41222818 41223115 -48281438 + L2 LINE L2 2938 3267 -5 857 197 15 6 chr17 41223600 41223941 -48280612 + L1M4 LINE L1 4741 5165 -981 1115 114 0 18 chr17 41223948 41224115 -48280438 + AluSg/x SINE Alu 136 299 -13 1346 223 11 15 chr17 41224115 41224251 -48280302 - AluJo SINE Alu -40 272 137 2256 109 3 6 chr17 41224251 41224563 -48279990 - AluSq SINE Alu -2 311 1 1346 223 11 15 chr17 41224563 41224699 -48279854 - AluJo SINE Alu -175 137 1 717 199 0 8 chr17 41224710 41224841 -48279712 - FLAM_C SINE Alu 0 133 4 1666 139 96 4 chr17 41225209 41225489 -48279064 + AluSx SINE Alu 1 306 -6 993 186 29 6 chr17 41225497 41225669 -48278884 + AluJb SINE Alu 118 293 -19 1709 178 3 13 chr17 41225679 41225983 -48278570 + AluJo SINE Alu 3 303 -9 1681 180 39 0 chr17 41226291 41226574 -48277979 + AluJb SINE Alu 1 294 -18 662 61 0 0 chr17 41227268 41227350 -48277203 + AluY SINE Alu 213 294 -17 1536 194 10 14 chr17 41227457 41227594 -48276959 + AluJb SINE Alu 1 137 -175 2456 77 0 0 chr17 41227594 41227892 -48276661 + AluY SINE Alu 1 298 -13 1536 194 10 14 chr17 41227892 41228043 -48276510 + AluJb SINE Alu 137 288 -24 1493 154 32 83 chr17 41228365 41228540 -48276013 - AluJo SINE Alu -16 296 142 2378 82 0 0 chr17 41228540 41228821 -48275732 - AluSx SINE Alu -31 281 1 1493 154 32 83 chr17 41228821 41228957 -48275596 - AluJo SINE Alu -170 142 1 619 113 0 0 chr17 41229952 41230032 -48274521 + AluS SINE Alu 11 90 -222 2130 133 3 0 chr17 41230150 41230451 -48274102 - AluSx SINE Alu -10 302 1 2345 67 0 7 chr17 41230456 41230767 -48273786 - AluY SINE Alu 0 309 1 21 0 0 0 chr17 41231515 41231536 -48273017 + AT_rich Low_complexity Low_complexity 1 21 0 1692 180 24 7 chr17 41231536 41231830 -48272723 - AluJo SINE Alu -13 299 1 1408 177 21 43 chr17 41231870 41232152 -48272401 + AluJb SINE Alu 25 300 -12 32 0 0 0 chr17 41232161 41232193 -48272360 + AT_rich Low_complexity Low_complexity 1 32 0 2132 137 0 3 chr17 41232230 41232523 -48272030 + AluSx SINE Alu 1 292 -20 350 217 0 0 chr17 41232527 41232587 -48271966 + AluJ/FLAM SINE Alu 1 60 -242 409 223 57 109 chr17 41232589 41232764 -48271789 - MER21B LTR ERV1 -425 438 273 537 104 13 0 chr17 41232779 41232856 -48271697 - MADE1 DNA Mariner 0 80 3 398 240 31 31 chr17 41232862 41232958 -48271595 - MER21B LTR ERV1 -767 96 1 23 33 0 0 chr17 41232988 41233018 -48271535 + AT_rich Low_complexity Low_complexity 1 30 0 2459 81 0 0 chr17 41233679 41233988 -48270565 - AluY SINE Alu -2 309 1 475 250 247 30 chr17 41234221 41234460 -48270093 + L1MC4a LINE L1 5643 5829 -1979 198 0 0 0 chr17 41234460 41234482 -48270071 + (TA)n Simple_repeat Simple_repeat 2 23 0 475 250 247 30 chr17 41234482 41234570 -48269983 + L1MC4a LINE L1 5829 6041 -1767 1858 143 43 0 chr17 41234712 41234992 -48269561 + AluSx SINE Alu 1 292 -20 841 181 66 72 chr17 41235050 41235286 -48269267 - L1MC5 LINE L1 -36 7925 7690 1518 119 171 8 chr17 41235286 41235537 -48269016 - AluSg SINE Alu -8 292 1 841 181 66 72 chr17 41235537 41235620 -48268933 - L1MC5 LINE L1 -271 7690 7608 1549 152 65 35 chr17 41235700 41235990 -48268563 + AluJb SINE Alu 1 299 -13 818 171 0 0 chr17 41235993 41236122 -48268431 + FLAM_C SINE Alu 2 130 -3 715 304 100 66 chr17 41236129 41236744 -48267809 + L1M4 LINE L1 35 628 -5768 2398 94 0 3 chr17 41236744 41237041 -48267512 + AluSx SINE Alu 1 296 -16 715 304 100 66 chr17 41237041 41237174 -48267379 + L1M4 LINE L1 628 755 -5641 2458 76 0 7 chr17 41237174 41237475 -48267078 + AluSx SINE Alu 1 299 -13 715 304 100 66 chr17 41237475 41237545 -48267008 + L1M4 LINE L1 755 882 -5514 600 110 40 20 chr17 41237548 41237648 -48266905 + AluSp/q SINE Alu 204 305 -8 935 191 12 0 chr17 41237709 41237871 -48266682 + FAM SINE Alu 1 164 -11 237 235 87 17 chr17 41237937 41238052 -48266501 + L1M4 LINE L1 2339 2461 -3754 1393 244 46 87 chr17 41238074 41238532 -48266021 + L1M4 LINE L1 2639 3115 -3100 2235 127 0 3 chr17 41238532 41238840 -48265713 + AluSx SINE Alu 1 307 -5 1393 244 46 87 chr17 41238840 41239007 -48265546 + L1M4 LINE L1 3115 3233 -2982 2495 54 3 0 chr17 41239007 41239302 -48265251 + AluY SINE Alu 1 296 -15 1393 244 46 87 chr17 41239302 41239396 -48265157 + L1M4 LINE L1 3233 3329 -2886 1779 181 7 0 chr17 41239404 41239692 -48264861 + AluJo SINE Alu 1 290 -22 1091 270 56 74 chr17 41239716 41240238 -48264315 + L1M4 LINE L1 4051 4581 -1634 2271 114 0 13 chr17 41240238 41240554 -48263999 - AluSx SINE Alu 0 312 1 1091 270 56 74 chr17 41240554 41240597 -48263956 + L1M4 LINE L1 4581 4623 -1592 1600 177 41 10 chr17 41240597 41240891 -48263662 - AluJb SINE Alu -9 303 1 1091 270 56 74 chr17 41240891 41241201 -48263352 + L1M4 LINE L1 4623 4911 -1304 264 194 16 0 chr17 41241202 41241264 -48263289 + L1M4 LINE L1 5181 5243 -972 2129 111 17 3 chr17 41241265 41241553 -48263000 + AluSg SINE Alu 2 293 -17 22 0 0 0 chr17 41241622 41241644 -48262909 + AT_rich Low_complexity Low_complexity 1 22 0 440 286 0 50 chr17 41241652 41241792 -48262761 + FLAM_A SINE Alu 1 133 0 1820 214 29 10 chr17 41241792 41241999 -48262554 + L1M4 LINE L1 5257 5459 -788 2133 107 20 20 chr17 41241999 41242298 -48262255 + AluSx SINE Alu 3 301 -11 1820 214 29 10 chr17 41242298 41242562 -48261991 + L1M4 LINE L1 5459 5736 -511 1697 182 26 16 chr17 41242562 41242869 -48261684 + AluJo SINE Alu 1 310 -2 1820 214 29 10 chr17 41242869 41242890 -48261663 + L1M4 LINE L1 5736 5755 -492 451 204 128 111 chr17 41242882 41243056 -48261497 + L1MC5 LINE L1 7510 7679 -282 * 2409 88 0 3 chr17 41243056 41243361 -48261192 + AluSg SINE Alu 1 304 -6 451 204 128 111 chr17 41243361 41243458 -48261095 + L1MC5 LINE L1 7679 7773 -188 1983 102 4 0 chr17 41243458 41243712 -48260841 - AluSq SINE Alu -20 293 39 451 204 128 111 chr17 41243712 41243752 -48260801 + L1MC5 LINE L1 7773 7811 -150 1817 161 10 3 chr17 41243752 41244043 -48260510 + AluSx SINE Alu 1 293 -19 451 204 128 111 chr17 41244043 41244126 -48260427 + L1MC5 LINE L1 7811 7913 -48 25 51 0 0 chr17 41244822 41244861 -48259692 + AT_rich Low_complexity Low_complexity 1 39 0 1647 139 121 4 chr17 41245063 41245336 -48259217 + AluSg1 SINE Alu 1 305 -4 280 281 0 24 chr17 41245469 41245551 -48259002 + MER116 DNA Mariner 1 80 0 1983 142 0 10 chr17 41245583 41245878 -48258675 + AluJo SINE Alu 1 292 -20 908 144 0 0 chr17 41246699 41246838 -48257715 + AluJb SINE Alu 169 307 -5 1045 157 92 5 chr17 41246838 41247023 -48257530 + MER46A DNA MER2_type 34 234 -2 1896 168 3 0 chr17 41249203 41249495 -48255058 + AluJb SINE Alu 1 293 -19 709 181 62 28 chr17 41249664 41249839 -48254714 - AluSg/x SINE Alu 0 314 135 2175 109 3 10 chr17 41249841 41250007 -48254546 - AluSx SINE Alu -12 300 135 1674 86 0 14 chr17 41250007 41250228 -48254325 - AluSg/x SINE Alu -11 299 82 2175 109 3 10 chr17 41250228 41250355 -48254198 - AluSx SINE Alu -177 135 9 1696 167 25 7 chr17 41250365 41250647 -48253906 - AluJb SINE Alu -25 287 1 1775 160 7 10 chr17 41250747 41251035 -48253518 - AluJo SINE Alu -15 297 11 2003 103 37 0 chr17 41251098 41251390 -48253163 - AluSx SINE Alu 0 302 1 2314 106 0 3 chr17 41251417 41251718 -48252835 + AluSx SINE Alu 1 300 -12 2012 124 0 0 chr17 41251841 41252114 -48252439 + AluSx SINE Alu 21 293 -19 214 192 13 39 chr17 41252141 41252219 -48252334 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2204 121 13 3 chr17 41252485 41252790 -48251763 - AluSp SINE Alu -5 308 1 625 183 0 56 chr17 41253319 41253445 -48251108 - FLAM_A SINE Alu -9 133 15 396 58 0 0 chr17 41253560 41253612 -48250941 + Alu SINE Alu 1 52 -251 2146 80 0 0 chr17 41253612 41253876 -48250677 - AluSg SINE Alu -46 264 1 441 134 8 55 chr17 41253883 41254010 -48250543 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 1699 140 104 0 chr17 41254021 41254300 -48250253 - AluSx SINE Alu -4 308 1 1921 121 29 21 chr17 41254555 41254863 -48249690 + AluSx SINE Alu 1 310 0 515 179 236 0 chr17 41255781 41255887 -48248666 - FLAM_C SINE Alu -11 132 2 502 188 0 21 chr17 41255923 41256019 -48248534 - AluJo SINE Alu -92 220 127 1816 165 0 3 chr17 41256090 41256375 -48248178 + AluJo SINE Alu 1 284 -28 556 230 58 52 chr17 41256380 41256429 -48248124 - MIR SINE MIR -63 199 152 2290 89 21 0 chr17 41256429 41256720 -48247833 - AluSg SINE Alu -13 297 1 556 230 58 52 chr17 41256720 41256844 -48247709 - MIR SINE MIR -110 152 25 1911 118 89 0 chr17 41256950 41257230 -48247323 + AluSx SINE Alu 1 305 -7 1940 148 30 10 chr17 41257532 41257837 -48246716 - AluSx SINE Alu -1 311 1 2224 100 0 3 chr17 41257861 41258152 -48246401 - AluSc SINE Alu -17 292 3 813 143 0 16 chr17 41258166 41258292 -48246261 - FLAM_C SINE Alu -9 124 1 2548 71 0 0 chr17 41258634 41258942 -48245611 - AluSx SINE Alu -4 308 1 2241 108 0 10 chr17 41259696 41259992 -48244561 - AluSx SINE Alu -15 297 5 22 56 0 0 chr17 41260195 41260231 -48244322 + AT_rich Low_complexity Low_complexity 1 36 0 1702 160 48 34 chr17 41260344 41260460 -48244093 + AluJo SINE Alu 3 116 -196 2362 88 10 0 chr17 41260460 41260765 -48243788 + AluSp SINE Alu 1 308 -5 2573 62 0 3 chr17 41260765 41261072 -48243481 + AluY SINE Alu 1 306 -5 1702 160 48 34 chr17 41261072 41261248 -48243305 + AluJo SINE Alu 115 300 -12 2109 125 0 10 chr17 41261872 41262177 -48242376 - AluSq SINE Alu 0 313 12 230 150 0 25 chr17 41262902 41262942 -48241611 - Alu SINE Alu -12 290 252 498 214 32 24 chr17 41262972 41263009 -48241544 - FLAM_A SINE Alu -174 137 102 2114 108 7 0 chr17 41263009 41263287 -48241266 - AluSx SINE Alu -32 280 1 498 214 32 24 chr17 41263287 41263375 -48241178 - FLAM_A SINE Alu -209 102 11 1846 114 100 7 chr17 41263611 41263740 -48240813 + AluSx SINE Alu 1 117 -195 2253 120 7 0 chr17 41263740 41264041 -48240512 + AluSx SINE Alu 3 305 -7 1846 114 100 7 chr17 41264041 41264192 -48240361 + AluSx SINE Alu 117 307 -5 1180 195 17 30 chr17 41264220 41264456 -48240097 + AluJo SINE Alu 9 241 -71 1351 138 48 82 chr17 41264472 41264741 -48239812 + AluJo SINE Alu 37 296 -16 1647 151 6 63 chr17 41266547 41266729 -48237824 - AluJo SINE Alu -13 299 141 1754 166 7 3 chr17 41266729 41267025 -48237528 - AluJb SINE Alu -15 297 1 1647 151 6 63 chr17 41267025 41267159 -48237394 - AluJo SINE Alu -171 141 1 2412 79 0 13 chr17 41267237 41267541 -48237012 - AluY SINE Alu -11 300 1 1920 113 4 0 chr17 41267677 41267933 -48236620 + AluSq SINE Alu 1 257 -56 412 86 17 0 chr17 41268033 41268091 -48236462 + AluSq SINE Alu 233 291 -22 728 47 0 0 chr17 41268367 41268453 -48236100 + AluSq/x SINE Alu 54 139 -174 1122 54 0 0 chr17 41268453 41268582 -48235971 - AluY SINE Alu -182 129 1 29 60 0 0 chr17 41269746 41269796 -48234757 + AT_rich Low_complexity Low_complexity 1 50 0 2307 102 10 3 chr17 41270376 41270681 -48233872 - AluSx SINE Alu -5 307 1 799 134 0 0 chr17 41271046 41271200 -48233353 - FLAM_A SINE Alu 0 154 1 26 30 0 0 chr17 41271326 41271359 -48233194 + AT_rich Low_complexity Low_complexity 1 33 0 1939 98 8 0 chr17 41273151 41273407 -48231146 + AluSg1 SINE Alu 51 308 -1 2189 141 0 0 chr17 41274038 41274344 -48230209 - AluSx SINE Alu -6 306 1 2054 90 61 0 chr17 41274543 41274821 -48229732 - AluSp SINE Alu -18 295 1 2249 68 7 0 chr17 41274946 41275225 -48229328 - AluY SINE Alu -30 281 1 1605 132 48 58 chr17 41275303 41275598 -48228955 - AluJo SINE Alu -20 292 1 279 243 29 0 chr17 41276113 41276183 -48228370 + L2 LINE L2 3241 3312 -1 220 234 64 32 chr17 41276230 41276324 -48228229 + MIR SINE MIR 33 129 -79 363 23 0 0 chr17 41276382 41276426 -48228127 + (CA)n Simple_repeat Simple_repeat 2 45 0 2307 81 37 7 chr17 41276510 41276808 -48227745 + AluSq SINE Alu 5 311 -2 1156 161 0 0 chr17 41327030 41327210 -48177343 - AluJb SINE Alu -121 191 12 23 0 0 0 chr17 41327220 41327243 -48177310 + AT_rich Low_complexity Low_complexity 1 23 0 2107 135 10 0 chr17 41327246 41327550 -48177003 - AluSq SINE Alu -6 307 1 1836 158 3 7 chr17 41327552 41327855 -48176698 - AluSp SINE Alu -10 303 2 897 128 0 0 chr17 41327859 41327992 -48176561 - FLAM_C SINE Alu 0 133 1 200 231 0 0 chr17 41328072 41328111 -48176442 - MIR SINE MIR -8 254 216 2160 123 20 0 chr17 41329383 41329685 -48174868 + AluSx SINE Alu 1 308 -4 2056 57 21 39 chr17 41329687 41329970 -48174583 + AluY SINE Alu 23 300 -11 287 257 14 14 chr17 41330284 41330358 -48174195 - AluSp SINE Alu -101 202 129 277 297 8 8 chr17 41330411 41330539 -48174014 - FLAM_C SINE Alu -5 128 1 1470 141 0 55 chr17 41331241 41331419 -48173134 - AluSq SINE Alu -14 299 144 2154 93 6 22 chr17 41331419 41331732 -48172821 - AluSx SINE Alu -4 308 1 1470 141 0 55 chr17 41331732 41331865 -48172688 - AluSq SINE Alu -169 144 5 1987 107 0 0 chr17 41332297 41332569 -48171984 + AluSc SINE Alu 5 276 -33 23 62 0 0 chr17 41333536 41333568 -48170985 + GC_rich Low_complexity Low_complexity 1 32 0 1406 148 0 47 chr17 41335345 41335662 -48168891 + AluSq SINE Alu 1 302 -11 29 0 0 0 chr17 41335740 41335769 -48168784 + AT_rich Low_complexity Low_complexity 1 29 0 1692 128 6 44 chr17 41335769 41336089 -48168464 + AluSx SINE Alu 3 310 -2 1662 95 3 88 chr17 41336091 41336234 -48168319 + AluSx SINE Alu 1 108 -204 1964 91 18 7 chr17 41336234 41336519 -48168034 + AluSg SINE Alu 1 288 -22 1662 95 3 88 chr17 41336519 41336671 -48167882 + AluSx SINE Alu 108 271 -41 401 151 0 27 chr17 41336732 41336805 -48167748 - AluS SINE Alu -240 72 2 26 0 0 0 chr17 41336812 41336838 -48167715 + AT_rich Low_complexity Low_complexity 1 26 0 198 103 0 0 chr17 41336843 41336872 -48167681 + (TA)n Simple_repeat Simple_repeat 1 29 0 1461 194 7 33 chr17 41336872 41337176 -48167377 - AluJo SINE Alu -5 297 2 244 241 0 0 chr17 41337975 41338033 -48166520 + T-rich Low_complexity Low_complexity 1 58 0 1021 256 13 4 chr17 41338369 41338603 -48165950 + MER8 DNA MER2_type 1 236 -3 1367 146 47 53 chr17 41338729 41339030 -48165523 - AluSc SINE Alu -10 299 1 277 219 31 16 chr17 41339106 41339170 -48165383 - MER81 DNA DNA 0 114 50 612 186 0 0 chr17 41339572 41339674 -48164879 + AluSg/x SINE Alu 190 291 -19 1926 101 18 4 chr17 41339681 41339958 -48164595 - AluSx SINE Alu -31 281 1 213 352 62 22 chr17 41340630 41340809 -48163744 - L2 LINE L2 -788 2526 2341 256 170 21 21 chr17 41341185 41341232 -48163321 + Alu SINE Alu 1 47 -254 406 214 0 10 chr17 41341334 41341432 -48163121 + AluSg/x SINE Alu 200 296 -13 2354 77 0 3 chr17 41341432 41341744 -48162809 + AluY SINE Alu 1 311 0 1259 97 115 52 chr17 41341925 41342213 -48162340 + AluSg SINE Alu 2 307 -3 1257 215 35 0 chr17 41342363 41342647 -48161906 + AluJo SINE Alu 1 294 -8 2000 129 3 3 chr17 41342892 41343187 -48161366 - AluSc SINE Alu -14 295 1 1200 164 30 50 chr17 41343192 41343490 -48161063 - AluJb SINE Alu -20 292 1 960 142 6 27 chr17 41343528 41343711 -48160842 - AluSg/x SINE Alu -14 298 120 219 241 19 19 chr17 41343736 41343790 -48160763 + MER5B DNA MER1_type 125 178 0 1094 171 8 159 chr17 41344053 41344199 -48160354 + AluJo SINE Alu 3 169 -133 1900 108 42 7 chr17 41344199 41344485 -48160068 + AluSg SINE Alu 1 296 -14 1576 150 51 11 chr17 41344491 41344622 -48159931 + AluSx SINE Alu 4 128 -184 1855 134 38 0 chr17 41344622 41344913 -48159640 + AluSx SINE Alu 1 302 -10 1576 150 51 11 chr17 41344913 41345054 -48159499 + AluSx SINE Alu 128 287 -25 1094 171 8 159 chr17 41345054 41345252 -48159301 + AluJo SINE Alu 174 301 -1 1119 189 8 42 chr17 41345769 41346034 -48158519 - AluJb SINE Alu -17 295 40 1607 164 23 23 chr17 41346107 41346412 -48158141 + AluSx SINE Alu 1 305 -7 658 154 0 0 chr17 41346475 41346579 -48157974 - FRAM SINE Alu -18 158 55 228 250 0 0 chr17 41346909 41346969 -48157584 + A-rich Low_complexity Low_complexity 1 60 0 270 0 0 0 chr17 41347178 41347208 -48157345 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2185 76 14 0 chr17 41347213 41347490 -48157063 - AluSc SINE Alu -27 282 2 1930 109 6 26 chr17 41348112 41348425 -48156128 - AluSx SINE Alu -5 307 1 21 0 0 0 chr17 41348428 41348449 -48156104 + AT_rich Low_complexity Low_complexity 1 21 0 2256 98 3 0 chr17 41348698 41349005 -48155548 - AluSp SINE Alu -4 309 2 1866 108 3 59 chr17 41349015 41349357 -48155196 - AluSc SINE Alu 0 309 1 518 248 0 31 chr17 41351855 41351984 -48152569 - L2 LINE L2 0 3272 3148 192 326 58 0 chr17 41352082 41352168 -48152385 - L2 LINE L2 -1182 2132 2042 203 297 62 0 chr17 41352917 41352981 -48151572 + L2 LINE L2 3191 3258 -55 2035 121 17 0 chr17 41353033 41353500 -48151053 + AluSx SINE Alu 6 477 0 180 0 0 0 chr17 41353500 41353520 -48151033 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 2390 168 47 7 chr17 41354403 41354867 -48149686 + L1MB3 LINE L1 5698 6180 -3 1818 116 0 23 chr17 41354887 41355188 -48149365 + AluSg SINE Alu 9 302 -8 1956 136 0 3 chr17 41355213 41355515 -48149038 + AluSx SINE Alu 1 301 -11 2084 108 0 7 chr17 41355709 41356015 -48148538 + AluSc SINE Alu 1 304 -5 714 130 17 0 chr17 41356026 41356141 -48148412 + AluSp SINE Alu 9 125 -188 1567 110 9 0 chr17 41356241 41356468 -48148085 - AluSx SINE Alu -83 229 1 1974 114 0 13 chr17 41356553 41356861 -48147692 - AluSg SINE Alu -6 304 1 2080 91 7 14 chr17 41357586 41357883 -48146670 - AluSq SINE Alu -18 295 1 707 187 8 22 chr17 41357920 41357938 -48146615 - AluJb SINE Alu -179 133 116 1728 140 4 0 chr17 41357938 41358217 -48146336 - AluY SINE Alu -31 280 1 707 187 8 22 chr17 41358217 41358332 -48146221 - AluJb SINE Alu -196 116 2 2123 110 0 0 chr17 41358339 41358638 -48145915 - AluSg SINE Alu -11 299 1 1556 158 3 23 chr17 41358707 41359010 -48145543 - AluSx SINE Alu -15 297 1 645 141 20 0 chr17 41359189 41359288 -48145265 - U6 snRNA snRNA -5 102 2 1528 175 3 29 chr17 41359298 41359606 -48144947 - AluSx SINE Alu -9 303 4 2194 103 0 0 chr17 41359617 41359917 -48144636 - AluSx SINE Alu -8 304 5 1457 207 7 3 chr17 41359968 41360272 -48144281 - AluJb SINE Alu -7 305 1 297 68 0 0 chr17 41360398 41360442 -48144111 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 430 154 13 13 chr17 41360450 41360528 -48144025 - AluSc SINE Alu -230 79 2 521 151 27 75 chr17 41360708 41360854 -48143699 - AluSq/x SINE Alu -163 149 11 1397 149 24 31 chr17 41361572 41361861 -48142692 + AluSc SINE Alu 4 290 -9 206 170 43 0 chr17 41364984 41365031 -48139522 + CT-rich Low_complexity Low_complexity 4 52 0 232 231 19 0 chr17 41365459 41365511 -48139042 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 271 381 54 18 chr17 41368645 41368813 -48135740 - MIR SINE MIR -55 207 34 2082 106 0 3 chr17 41369065 41369348 -48135205 + AluSq SINE Alu 1 282 -31 297 0 0 0 chr17 41369353 41369386 -48135167 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2194 64 7 7 chr17 41369386 41369695 -48134858 + AluY SINE Alu 1 309 0 224 192 58 0 chr17 41370988 41371040 -48133513 + CT-rich Low_complexity Low_complexity 2 56 0 211 262 0 0 chr17 41371238 41371280 -48133273 + G-rich Low_complexity Low_complexity 2 43 0 243 286 0 0 chr17 41371347 41371410 -48133143 + GA-rich Low_complexity Low_complexity 2 64 0 198 118 0 0 chr17 41371584 41371618 -48132935 + (TG)n Simple_repeat Simple_repeat 1 34 0 339 222 0 0 chr17 41371879 41371960 -48132593 + A-rich Low_complexity Low_complexity 1 81 0 2088 75 3 29 chr17 41372577 41372885 -48131668 + AluSg SINE Alu 1 300 -10 2016 109 3 10 chr17 41373794 41374098 -48130455 - AluSx SINE Alu -10 302 1 384 265 75 20 chr17 41374287 41374434 -48130119 + MIR SINE MIR 47 201 -61 1115 147 90 5 chr17 41374527 41374738 -48129815 + L1MD2 LINE L1 5663 5891 -468 829 209 60 35 chr17 41374740 41374941 -48129612 + AluJo SINE Alu 6 211 -101 847 189 0 68 chr17 41374953 41375143 -48129410 - AluSg/x SINE Alu -3 307 131 553 184 0 0 chr17 41375144 41375242 -48129311 + AluJo SINE Alu 203 300 -12 2010 202 53 9 chr17 41375242 41375678 -48128875 + L1MD2 LINE L1 5890 6344 -15 186 205 103 0 chr17 41376134 41376173 -48128380 + L2 LINE L2 3212 3254 -18 945 251 40 12 chr17 41376608 41376855 -48127698 - MIR SINE MIR -6 256 3 1559 176 59 10 chr17 41378612 41378783 -48125770 - AluJb SINE Alu -9 303 111 513 0 0 0 chr17 41378783 41378840 -48125713 + (TG)n Simple_repeat Simple_repeat 2 58 0 1559 176 59 10 chr17 41378840 41378957 -48125596 - AluJb SINE Alu -201 111 1 24 0 0 0 chr17 41379383 41379407 -48125146 + AT_rich Low_complexity Low_complexity 1 24 0 2042 92 14 27 chr17 41379407 41379702 -48124851 - AluY SINE Alu -20 291 1 2068 82 0 54 chr17 41379756 41380072 -48124481 - AluSc SINE Alu -10 299 1 2002 93 0 17 chr17 41381671 41381961 -48122592 + AluSx SINE Alu 18 302 -10 419 215 0 0 chr17 41383626 41383705 -48120848 + MIR3 SINE MIR 97 175 -33 343 61 0 0 chr17 41383705 41383754 -48120799 - AluSx SINE Alu -1 301 253 1368 111 0 15 chr17 41383755 41383954 -48120599 - AluSx SINE Alu -116 196 1 369 43 0 0 chr17 41384685 41384732 -48119821 + (GA)n Simple_repeat Simple_repeat 1 47 0 2313 81 0 7 chr17 41387338 41387646 -48116907 + AluSp SINE Alu 1 306 -7 716 99 0 81 chr17 41388256 41388294 -48116259 + U6 snRNA snRNA 1 41 -66 2162 72 0 23 chr17 41388294 41388599 -48115954 + AluY SINE Alu 1 298 -13 716 99 0 81 chr17 41388599 41388671 -48115882 + U6 snRNA snRNA 41 102 -5 1852 111 0 40 chr17 41388685 41389009 -48115544 + AluY SINE Alu 1 311 0 2114 85 0 7 chr17 41389012 41389295 -48115258 + AluSx SINE Alu 22 302 -10 1190 178 56 26 chr17 41389304 41389574 -48114979 + AluJo SINE Alu 1 278 -34 2278 69 13 3 chr17 41389988 41390292 -48114261 + AluSp SINE Alu 1 307 -6 790 125 6 65 chr17 41390295 41390463 -48114090 + AluSg/x SINE Alu 155 312 0 186 43 0 0 chr17 41390486 41390509 -48114044 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 2209 112 3 3 chr17 41392142 41392455 -48112098 + AluSp SINE Alu 1 313 0 1865 105 10 57 chr17 41392461 41392775 -48111778 + AluSq SINE Alu 1 299 -14 616 204 48 60 chr17 41392964 41393131 -48111422 + MIR3 SINE MIR 36 200 -8 2296 51 45 3 chr17 41393310 41393602 -48110951 + AluY SINE Alu 1 304 -7 228 254 75 37 chr17 41395869 41396003 -48108550 - L3b LINE CR1 -187 1396 1258 462 18 0 0 chr17 41396021 41396076 -48108477 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1058 145 0 16 chr17 41396076 41396262 -48108291 - AluSg/x SINE Alu -28 282 100 1750 114 37 4 chr17 41397116 41397432 -48107121 + AluSg SINE Alu 1 325 0 24 0 0 0 chr17 41402393 41402417 -48102136 + AT_rich Low_complexity Low_complexity 1 24 0 549 100 0 0 chr17 41402832 41402922 -48101631 + (GA)n Simple_repeat Simple_repeat 2 91 0 21 0 0 0 chr17 41405549 41405570 -48098983 + AT_rich Low_complexity Low_complexity 1 21 0 447 202 96 10 chr17 41405810 41405914 -48098639 + MER81 DNA DNA 2 114 0 1999 110 3 19 chr17 41406398 41406706 -48097847 + AluSx SINE Alu 1 303 -9 2023 114 0 20 chr17 41406818 41407124 -48097429 + AluSx SINE Alu 1 300 -12 394 105 0 64 chr17 41407171 41407277 -48097276 + AluSx SINE Alu 1 70 -233 1232 178 5 5 chr17 41407377 41407619 -48096934 + AluSx SINE Alu 67 308 0 393 272 101 59 chr17 41409590 41409759 -48094794 + MER5B DNA MER1_type 3 178 0 1724 123 79 14 chr17 41410642 41410934 -48093619 + AluSp SINE Alu 2 312 -1 748 152 14 51 chr17 41411028 41411166 -48093387 + AluJo/FLAM SINE Alu 1 133 -169 2109 114 0 7 chr17 41411166 41411465 -48093088 + AluSx SINE Alu 1 297 -15 1856 128 27 10 chr17 41411465 41411762 -48092791 + AluSx SINE Alu 1 302 -10 1322 98 67 62 chr17 41411764 41411885 -48092668 + AluSq SINE Alu 1 125 -188 2050 107 10 10 chr17 41411885 41412195 -48092358 + AluSp SINE Alu 1 310 -3 1322 98 67 62 chr17 41412195 41412297 -48092256 + AluSq SINE Alu 125 225 -88 246 32 0 0 chr17 41412315 41412346 -48092207 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1800 100 48 4 chr17 41412347 41412641 -48091912 + AluSx SINE Alu 2 307 0 1290 198 10 41 chr17 41413155 41413448 -48091105 + AluJo SINE Alu 16 299 -13 1462 129 108 32 chr17 41413461 41413739 -48090814 + AluSx SINE Alu 11 309 -3 1133 188 6 74 chr17 41413843 41414168 -48090385 + AluSq SINE Alu 1 303 0 1809 139 0 4 chr17 41414207 41414473 -48090080 + AluSq SINE Alu 1 265 -48 203 231 15 15 chr17 41414506 41414571 -48089982 + A-rich Low_complexity Low_complexity 1 65 0 227 171 0 0 chr17 41414589 41414624 -48089929 - Alu SINE Alu -232 70 36 925 191 7 77 chr17 41414625 41414792 -48089761 + AluJb SINE Alu 26 164 -148 1395 185 0 13 chr17 41414792 41415095 -48089458 + AluSg SINE Alu 1 299 -11 925 191 7 77 chr17 41415095 41415226 -48089327 + AluJb SINE Alu 164 303 -9 2192 96 0 3 chr17 41416121 41416423 -48088130 + AluY SINE Alu 1 301 -10 1353 166 44 41 chr17 41416437 41416732 -48087821 + AluJo SINE Alu 6 301 -11 302 326 83 50 chr17 41416813 41416994 -48087559 + L2 LINE L2 3082 3268 -4 1047 133 0 41 chr17 41417875 41418071 -48086482 - AluSc SINE Alu -9 300 113 527 239 150 51 chr17 41418084 41418377 -48086176 + L1ME1 LINE L1 5841 6162 -4 275 206 29 49 chr17 41418373 41418475 -48086078 + L1MD3 LINE L1 7911 8041 -1 * 721 175 8 0 chr17 41418479 41418599 -48085954 + FLAM_C SINE Alu 1 121 -12 979 211 48 28 chr17 41419566 41419855 -48084698 + AluSp SINE Alu 7 301 -12 2038 108 0 7 chr17 41420059 41420345 -48084208 + AluSg SINE Alu 6 289 -21 1409 193 3 10 chr17 41420345 41420651 -48083902 + AluSg SINE Alu 1 304 -6 821 237 24 28 chr17 41420803 41421014 -48083539 + AluJo SINE Alu 2 211 -101 1321 179 0 30 chr17 41421034 41421331 -48083222 + AluSq SINE Alu 1 288 -25 1444 168 20 56 chr17 41421941 41422245 -48082308 + AluJb SINE Alu 1 293 -19 630 225 50 21 chr17 41422312 41422510 -48082043 - MIR SINE MIR -13 249 50 212 154 0 0 chr17 41424477 41424516 -48080037 + C-rich Low_complexity Low_complexity 5 43 0 2280 80 0 3 chr17 41425349 41425662 -48078891 - AluSx SINE Alu 0 312 1 1489 131 0 122 chr17 41425663 41425999 -48078554 - AluJb SINE Alu -5 297 3 295 333 103 18 chr17 41426126 41426291 -48078262 - MIR SINE MIR -74 188 10 338 295 104 64 chr17 41426485 41426658 -48077895 - MIR SINE MIR -42 220 41 975 184 3 100 chr17 41426732 41427063 -48077490 - AluJo SINE Alu 0 302 4 1664 135 23 16 chr17 41427118 41427422 -48077131 + AluSc SINE Alu 1 306 -3 936 133 218 32 chr17 41427509 41427642 -48076911 + AluSg1 SINE Alu 1 108 -201 1512 69 4 26 chr17 41427642 41427873 -48076680 + AluY SINE Alu 1 226 -85 936 133 218 32 chr17 41427873 41427987 -48076566 + AluSg1 SINE Alu 108 294 -15 787 186 0 67 chr17 41428117 41428311 -48076242 + AluSg/x SINE Alu 100 280 -30 1007 158 0 12 chr17 41428370 41428541 -48076012 + AluSg/x SINE Alu 125 293 -17 1011 228 114 22 chr17 41428568 41428840 -48075713 + AluJo SINE Alu 5 301 -1 2248 74 7 10 chr17 41428846 41429145 -48075408 + AluSp SINE Alu 2 299 -14 2281 84 0 3 chr17 41429146 41429454 -48075099 + AluSp SINE Alu 1 307 -6 725 119 0 80 chr17 41429455 41429606 -48074947 + Tigger4(Zombi) DNA MER2_type 2513 2651 -80 32 57 0 0 chr17 41630267 41630320 -47874233 + GC_rich Low_complexity Low_complexity 1 53 0 345 344 76 25 chr17 41630369 41630526 -47874027 - L1MCa LINE L1 -4036 2390 2226 23 33 0 0 chr17 41631204 41631234 -47873319 + GC_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr17 41632246 41632285 -47872268 + (A)n Simple_repeat Simple_repeat 1 39 0 389 240 60 10 chr17 41634341 41634441 -47870112 + MIR3 SINE MIR 101 205 -3 2013 179 89 52 chr17 41634852 41635337 -47869216 - MLT1D LTR MaLR 0 505 3 794 278 60 13 chr17 41635355 41635589 -47868964 - MIR SINE MIR -2 260 16 358 295 35 68 chr17 41636143 41636354 -47868199 + MIR SINE MIR 56 258 -4 227 297 62 55 chr17 41636430 41636558 -47867995 + L2 LINE L2 3136 3264 -8 2000 85 11 7 chr17 41636560 41636869 -47867684 + AluSx SINE Alu 1 310 0 309 51 0 0 chr17 41637105 41637144 -47867409 + (CCG)n Simple_repeat Simple_repeat 1 39 0 916 61 15 23 chr17 41637907 41638039 -47866514 + AluSg SINE Alu 1 131 -179 1233 64 0 0 chr17 41638149 41638305 -47866248 + AluSp/q SINE Alu 158 313 0 310 276 60 43 chr17 41638310 41638426 -47866127 + MIR SINE MIR 32 149 -113 2168 95 0 7 chr17 41639095 41639390 -47865163 + AluSx SINE Alu 1 293 -19 318 291 94 17 chr17 41640251 41640368 -47864185 + MIR SINE MIR 19 144 -64 1657 140 16 63 chr17 41640653 41640834 -47863719 - AluSx SINE Alu -11 301 113 2217 102 7 0 chr17 41640834 41641139 -47863414 - AluSc SINE Alu -2 307 1 189 0 0 0 chr17 41641140 41641161 -47863392 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2143 102 0 0 chr17 41641161 41641444 -47863109 - AluSx SINE Alu -29 283 1 1657 140 16 63 chr17 41641444 41641574 -47862979 - AluSx SINE Alu -197 115 2 824 263 33 4 chr17 41642310 41642542 -47862011 - MIR SINE MIR -11 251 10 335 62 0 0 chr17 41643922 41643970 -47860583 - L1P4 LINE L1 -380 5788 5741 1241 162 10 0 chr17 41643971 41644198 -47860355 - AluJo SINE Alu 0 312 83 633 320 101 35 chr17 41644198 41644511 -47860042 + L2 LINE L2 2349 2692 -622 2280 93 0 13 chr17 41644511 41644821 -47859732 - AluSg SINE Alu -4 306 1 633 320 101 35 chr17 41644821 41644882 -47859671 + L2 LINE L2 2692 2748 -566 273 262 48 24 chr17 41644888 41645014 -47859539 + L1MB8 LINE L1 5950 6078 -100 455 325 97 50 chr17 41645023 41645133 -47859420 + L2 LINE L2 2827 2930 -383 1704 108 12 4 chr17 41645133 41645382 -47859171 - AluSq SINE Alu -10 303 53 455 325 97 50 chr17 41645382 41645736 -47858817 + L2 LINE L2 2930 3313 0 1958 110 7 20 chr17 41646459 41646744 -47857809 + AluSx SINE Alu 1 283 -29 264 30 0 0 chr17 41646744 41646777 -47857776 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 1958 110 7 20 chr17 41646777 41646791 -47857762 + AluSx SINE Alu 283 296 -16 564 236 177 0 chr17 41646911 41647114 -47857439 + L2 LINE L2 2477 2715 -599 2008 143 0 19 chr17 41647154 41647469 -47857084 + AluSx SINE Alu 1 309 -3 1921 164 7 0 chr17 41647480 41647790 -47856763 + AluSx SINE Alu 1 312 0 1560 208 14 0 chr17 41647800 41648089 -47856464 + AluJb SINE Alu 1 293 -19 2250 91 7 0 chr17 41648095 41648403 -47856150 + AluSp SINE Alu 1 310 -3 402 143 23 160 chr17 41648426 41648499 -47856054 - L1MB8 LINE L1 -53 6125 6044 2228 110 0 0 chr17 41648499 41648799 -47855754 - AluSg SINE Alu -6 304 5 1911 137 65 0 chr17 41648809 41649102 -47855451 - AluSx SINE Alu 0 312 1 402 143 23 160 chr17 41649102 41649192 -47855361 - L1MB8 LINE L1 -144 6034 5975 971 271 176 21 chr17 41649194 41649532 -47855021 + L2 LINE L2 2689 2974 -339 1639 153 3 46 chr17 41649532 41649858 -47854695 - AluSx SINE Alu 0 312 1 971 271 176 21 chr17 41649858 41650071 -47854482 + L2 LINE L2 2974 3313 0 712 157 9 9 chr17 41650281 41650396 -47854157 + FLAM_A SINE Alu 12 126 -16 2300 110 0 0 chr17 41650596 41650904 -47853649 - AluSc SINE Alu 0 309 2 338 261 61 43 chr17 41651239 41651354 -47853199 + MIR SINE MIR 97 213 -49 23 33 0 0 chr17 41651354 41651384 -47853169 + AT_rich Low_complexity Low_complexity 1 30 0 2441 67 0 0 chr17 41651390 41651687 -47852866 + AluY SINE Alu 1 297 -14 234 62 0 0 chr17 41651722 41651754 -47852799 + (ATG)n Simple_repeat Simple_repeat 2 33 0 1954 141 3 0 chr17 41651756 41652047 -47852506 - AluSx SINE Alu -20 292 1 236 385 30 18 chr17 41652133 41652300 -47852253 + L2 LINE L2 2593 2761 -553 772 260 48 0 chr17 41652300 41652508 -47852045 + MIR SINE MIR 1 218 -44 364 312 52 76 chr17 41652653 41652846 -47851707 + L2 LINE L2 2825 3012 -260 2268 107 3 0 chr17 41652846 41653156 -47851397 + AluSx SINE Alu 2 312 0 364 312 52 76 chr17 41653156 41653212 -47851341 + L2 LINE L2 3012 3068 -204 1053 281 0 16 chr17 41653238 41653494 -47851059 + MIR SINE MIR 10 261 -1 246 323 73 48 chr17 41653532 41653656 -47850897 + L2 LINE L2 3124 3250 -22 590 299 37 11 chr17 41653682 41653869 -47850684 - MIR SINE MIR -21 241 50 267 222 133 22 chr17 41653864 41653954 -47850599 + MIR SINE MIR 106 205 -57 * 216 287 86 0 chr17 41656258 41656360 -47848193 + MIR SINE MIR 20 141 -67 2291 87 6 6 chr17 41656371 41656683 -47847870 + AluSp SINE Alu 1 312 -1 200 257 28 83 chr17 41657493 41657602 -47846951 + C-rich Low_complexity Low_complexity 6 108 0 422 260 93 20 chr17 41661121 41661271 -47843282 + MIR3 SINE MIR 34 194 -14 358 279 184 7 chr17 41661528 41661675 -47842878 - MIR SINE MIR -34 228 56 216 200 18 0 chr17 41661711 41661766 -47842787 + (CAGG)n Simple_repeat Simple_repeat 4 59 0 22 0 0 0 chr17 41662257 41662279 -47842274 + AT_rich Low_complexity Low_complexity 1 22 0 225 186 0 0 chr17 41663728 41663771 -47840782 - L3 LINE CR1 -115 1462 1420 242 306 74 16 chr17 41663955 41664076 -47840477 - MIR SINE MIR -63 145 18 260 340 48 34 chr17 41665009 41665156 -47839397 - MIR SINE MIR -14 248 100 2282 97 0 3 chr17 41668204 41668502 -47836051 - AluSx SINE Alu -15 297 1 187 339 0 0 chr17 41669872 41669928 -47834625 + MIR SINE MIR 28 83 -125 1888 164 7 0 chr17 41670261 41670566 -47833987 + AluJo SINE Alu 1 307 -5 982 196 0 0 chr17 41671323 41671491 -47833062 - FRAM SINE Alu -10 166 1 215 209 0 0 chr17 41671502 41671545 -47833008 + L2 LINE L2 3216 3258 -14 351 96 0 0 chr17 41671546 41671598 -47832955 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 279 340 34 48 chr17 41671707 41671854 -47832699 + MIR SINE MIR 2 146 -116 862 300 166 13 chr17 41672815 41673465 -47831088 + L2 LINE L2 2553 3313 0 294 241 8 0 chr17 41673626 41673696 -47830857 - MIR SINE MIR -60 148 91 2239 73 3 20 chr17 41673877 41674177 -47830376 + AluY SINE Alu 1 295 -16 1904 131 3 23 chr17 41674914 41675219 -47829334 - AluJo SINE Alu -13 299 1 1367 217 94 8 chr17 41675295 41675677 -47828876 - MLT1C LTR MaLR -52 415 1 503 145 0 0 chr17 41675704 41675780 -47828773 - AluJ/FLAM SINE Alu -222 90 15 1484 221 107 16 chr17 41675794 41675848 -47828705 - L1MC4a LINE L1 -1800 6008 5960 2313 106 3 0 chr17 41675848 41676159 -47828394 - AluSx SINE Alu 0 312 1 1484 221 107 16 chr17 41676159 41676588 -47827965 - L1MC4a LINE L1 -1848 5960 5481 283 292 11 34 chr17 41676651 41676829 -47827724 + CT-rich Low_complexity Low_complexity 1 174 0 281 324 90 0 chr17 41677118 41677229 -47827324 + MIR SINE MIR 16 136 -72 1840 137 13 43 chr17 41677269 41677426 -47827127 - AluJo SINE Alu -22 290 145 2432 60 0 13 chr17 41677426 41677740 -47826813 - AluY SINE Alu -1 310 1 1840 137 13 43 chr17 41677740 41677881 -47826672 - AluJo SINE Alu -167 145 1 2329 74 3 0 chr17 41678524 41678823 -47825730 - AluSc SINE Alu -8 301 2 406 259 65 77 chr17 41679052 41679184 -47825369 + MIR SINE MIR 7 139 -123 1822 171 3 0 chr17 41679191 41679495 -47825058 + AluJb SINE Alu 1 305 -7 313 105 0 35 chr17 41679495 41679544 -47825009 + L1MB4 LINE L1 6132 6180 0 2206 123 3 0 chr17 41679552 41679860 -47824693 + AluSx SINE Alu 1 309 -3 406 259 65 77 chr17 41679860 41679888 -47824665 + MIR SINE MIR 146 174 -88 1871 129 0 7 chr17 41680000 41680278 -47824275 + AluSx SINE Alu 30 305 -7 361 294 29 0 chr17 41680350 41680452 -47824101 + MIR SINE MIR 39 143 -119 1653 103 34 89 chr17 41680874 41681166 -47823387 - AluJo SINE Alu -13 299 24 309 286 53 70 chr17 41681191 41681362 -47823191 + MIR SINE MIR 77 244 -18 580 263 115 0 chr17 41681723 41681946 -47822607 + MIR SINE MIR 16 262 0 1376 222 168 13 chr17 41682508 41683212 -47821341 + L2 LINE L2 2482 3294 -19 186 346 153 30 chr17 41683541 41683743 -47820810 + L2 LINE L2 2837 3063 -209 526 259 44 7 chr17 41683970 41684105 -47820448 + MIR SINE MIR 73 212 -50 942 103 37 0 chr17 41684274 41684410 -47820143 - FAM SINE Alu -13 172 32 251 200 0 0 chr17 41684621 41684666 -47819887 - AluYb8 SINE Alu -130 178 134 340 243 84 19 chr17 41685396 41685503 -47819050 + MIR SINE MIR 33 146 -62 384 332 61 70 chr17 41685614 41685957 -47818596 - L2 LINE L2 -5 3267 2928 1270 211 124 0 chr17 41686615 41686881 -47817672 - AluJo SINE Alu -1 301 3 691 232 179 0 chr17 41686894 41687101 -47817452 - MIR SINE MIR -13 249 6 396 367 226 14 chr17 41687339 41687889 -47816664 - L2 LINE L2 -495 2819 2154 212 268 56 28 chr17 41690260 41690331 -47814222 + MIR SINE MIR 44 116 -92 2147 135 0 0 chr17 41690518 41690829 -47813724 - AluSx SINE Alu -1 311 1 240 185 0 0 chr17 41691694 41691748 -47812805 + CT-rich Low_complexity Low_complexity 3 56 0 1778 154 0 47 chr17 41694487 41694659 -47809894 - AluJo SINE Alu -8 304 152 2345 84 3 0 chr17 41694659 41694956 -47809597 - AluSp SINE Alu -15 298 1 1778 154 0 47 chr17 41694956 41695102 -47809451 - AluJo SINE Alu -160 152 1 268 302 66 19 chr17 41695125 41695231 -47809322 + L2 LINE L2 3159 3269 -3 525 286 45 30 chr17 41696669 41696868 -47807685 - MIR3 SINE MIR 0 208 7 219 246 18 0 chr17 41698718 41698775 -47805778 + CT-rich Low_complexity Low_complexity 2 59 0 336 259 11 63 chr17 41700919 41701108 -47803445 + GA-rich Low_complexity Low_complexity 2 180 0 372 265 157 24 chr17 41701888 41702054 -47802499 + MIR SINE MIR 21 208 -54 235 262 16 0 chr17 41702499 41702560 -47801993 + (TTCA)n Simple_repeat Simple_repeat 1 62 0 447 252 77 0 chr17 41702607 41702762 -47801791 - L1ME3 LINE L1 -8 6154 5988 2073 117 0 28 chr17 41702820 41703137 -47801416 - AluJb SINE Alu -4 308 1 370 250 293 21 chr17 41703267 41703455 -47801098 - MIR SINE MIR -11 251 13 486 262 141 37 chr17 41704799 41704990 -47799563 + MIR SINE MIR 52 262 0 2306 99 0 3 chr17 41705128 41705431 -47799122 - AluSq SINE Alu -11 302 1 548 346 51 0 chr17 41705793 41706010 -47798543 + MIR SINE MIR 28 255 -7 625 285 32 0 chr17 41706031 41706189 -47798364 + MIR SINE MIR 20 182 -80 185 56 0 56 chr17 41707548 41707584 -47796969 + (CCCCG)n Simple_repeat Simple_repeat 1 34 0 33 0 0 0 chr17 41707725 41707758 -47796795 + GC_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr17 41707917 41707962 -47796591 + GC_rich Low_complexity Low_complexity 1 45 0 217 348 116 14 chr17 41708071 41708209 -47796344 - MIR SINE MIR -79 183 32 205 339 45 9 chr17 41708252 41708364 -47796189 - L2 LINE L2 -213 3059 2944 664 223 101 42 chr17 41708624 41708862 -47795691 + MIR SINE MIR 11 262 0 490 200 50 0 chr17 41708931 41709031 -47795522 + MIR SINE MIR 44 148 -60 832 159 0 8 chr17 41709100 41709232 -47795321 + FLAM_A SINE Alu 1 131 -2 1998 100 14 0 chr17 41709233 41709542 -47795011 + AluSx SINE Alu 1 313 0 262 264 109 23 chr17 41710089 41710215 -47794338 - MIR SINE MIR -63 145 23 2070 141 3 0 chr17 41710341 41710647 -47793906 + AluSx SINE Alu 1 307 -5 184 147 29 0 chr17 41710734 41710768 -47793785 - MIR SINE MIR -108 154 120 2386 63 0 3 chr17 41711358 41711658 -47792895 + AluSp SINE Alu 1 299 -14 197 306 16 0 chr17 41712158 41712220 -47792333 - L2 LINE L2 -3 3310 3248 263 68 0 23 chr17 41712293 41712337 -47792216 - FAM SINE Alu -2 173 131 188 81 0 27 chr17 41712443 41712480 -47792073 - L2 LINE L2 -209 3063 3028 213 238 0 0 chr17 41714636 41714678 -47789875 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 456 225 25 8 chr17 41714824 41714944 -47789609 - MIR SINE MIR -61 201 80 1902 155 0 0 chr17 41714946 41715243 -47789310 - AluJb SINE Alu -15 297 1 2490 47 0 0 chr17 41715248 41715544 -47789009 - AluY SINE Alu -15 296 1 373 278 125 7 chr17 41715926 41716070 -47788483 + MIR3 SINE MIR 24 184 -24 218 303 169 0 chr17 41716243 41716332 -47788221 + L2 LINE L2 3208 3311 -2 333 186 0 0 chr17 41716523 41716593 -47787960 + (TG)n Simple_repeat Simple_repeat 2 71 0 211 133 0 22 chr17 41717613 41717658 -47786895 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 212 221 0 15 chr17 41717932 41718000 -47786553 + CT-rich Low_complexity Low_complexity 1 67 0 22 0 0 0 chr17 41718671 41718693 -47785860 + GC_rich Low_complexity Low_complexity 1 22 0 222 192 0 0 chr17 41719351 41719403 -47785150 + GA-rich Low_complexity Low_complexity 3 54 0 25 31 0 0 chr17 41719876 41719908 -47784645 + GC_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr17 41720357 41720385 -47784168 + GC_rich Low_complexity Low_complexity 1 28 0 334 291 34 83 chr17 41720909 41721080 -47783473 + L1MCa LINE L1 2226 3564 -2862 28 19 0 56 chr17 41721141 41721195 -47783358 + GC_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr17 41721222 41721243 -47783310 + GC_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr17 41722371 41722401 -47782152 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 248 220 0 0 chr17 41728044 41728103 -47776450 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 236 288 30 0 chr17 41729465 41729531 -47775022 - L2 LINE L2 0 3272 3205 262 194 41 10 chr17 41730173 41730271 -47774282 + CT-rich Low_complexity Low_complexity 1 101 0 2381 94 3 0 chr17 41730989 41731298 -47773255 + AluSp SINE Alu 1 310 -3 378 298 53 8 chr17 41731353 41731484 -47773069 - MIR SINE MIR -10 252 116 1984 155 3 3 chr17 41731510 41731820 -47772733 - AluJb SINE Alu -2 310 1 247 243 0 29 chr17 41731900 41731970 -47772583 + CT-rich Low_complexity Low_complexity 2 69 0 234 333 13 22 chr17 41732354 41732495 -47772058 + CT-rich Low_complexity Low_complexity 1 229 0 234 0 0 0 chr17 41732642 41732668 -47771885 + (T)n Simple_repeat Simple_repeat 1 26 0 212 259 99 25 chr17 41734315 41734396 -47770157 + MIR SINE MIR 21 107 -101 193 119 48 0 chr17 41734465 41734507 -47770046 + (TTA)n Simple_repeat Simple_repeat 1 44 0 240 379 0 11 chr17 41734518 41734613 -47769940 + MIR SINE MIR 168 261 -1 2061 125 0 3 chr17 41734767 41735093 -47769460 + AluSx SINE Alu 1 312 0 1698 103 9 0 chr17 41735204 41735437 -47769116 - L1PA10 LINE L1 -10 6158 5924 392 244 0 39 chr17 41735538 41735666 -47768887 - L1MC4 LINE L1 -1339 6983 1995 255 358 70 26 chr17 41735671 41735900 -47768653 - L2 LINE L2 -612 2702 2464 312 27 0 0 chr17 41737011 41737048 -47767505 + (CA)n Simple_repeat Simple_repeat 1 37 0 447 265 103 49 chr17 41737858 41738062 -47766491 + MIR SINE MIR 34 248 -14 2424 77 3 3 chr17 41738632 41738945 -47765608 - AluSp SINE Alu 0 313 1 2068 149 3 0 chr17 41738973 41739281 -47765272 - AluSg SINE Alu -1 309 1 462 118 13 0 chr17 41739281 41739357 -47765196 + MER69 DNA AcHobo 2448 2524 -2 606 249 87 65 chr17 41739377 41739550 -47765003 - MIR SINE MIR -12 250 69 2427 67 0 0 chr17 41739550 41739848 -47764705 - AluY SINE Alu -13 298 1 606 249 87 65 chr17 41739848 41739903 -47764650 - MIR SINE MIR -193 69 17 536 71 10 31 chr17 41740138 41740236 -47764317 + MER53 DNA DNA 5 100 -89 475 102 71 0 chr17 41740156 41740254 -47764299 - MER53 DNA DNA -12 177 73 * 2091 118 0 3 chr17 41740467 41740764 -47763789 + AluSp SINE Alu 1 296 -17 189 74 0 0 chr17 41741283 41741310 -47763243 + (GGA)n Simple_repeat Simple_repeat 3 29 0 22 80 0 0 chr17 41741428 41741478 -47763075 + GC_rich Low_complexity Low_complexity 1 50 0 443 257 176 45 chr17 41742494 41742716 -47761837 - MIR SINE MIR -1 261 11 1198 154 30 5 chr17 41743396 41743597 -47760956 + AluJb SINE Alu 86 291 -21 347 283 246 0 chr17 41744016 41744154 -47760399 - MIR SINE MIR -13 249 78 219 333 53 0 chr17 41744963 41745038 -47759515 - MIR SINE MIR -151 111 33 225 94 0 0 chr17 41745399 41745431 -47759122 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2135 93 7 0 chr17 41745583 41745873 -47758680 + AluSg SINE Alu 1 292 -18 364 330 168 10 chr17 41746253 41746462 -47758091 + MIR SINE MIR 2 243 -19 340 278 60 30 chr17 41748675 41748808 -47755745 + MIR SINE MIR 16 152 -56 2343 75 3 3 chr17 41748936 41749231 -47755322 + AluSp SINE Alu 1 295 -18 246 367 0 0 chr17 41749236 41749315 -47755238 - MIR3 SINE MIR -41 167 89 286 188 72 0 chr17 41749802 41749871 -47754682 - MER91A DNA MER1_type 0 196 123 338 338 88 14 chr17 41749899 41750047 -47754506 - MER91A DNA MER1_type -37 159 1 520 311 49 15 chr17 41750049 41750252 -47754301 - MIR SINE MIR -24 238 34 1068 238 70 0 chr17 41751861 41752105 -47752448 + MIR SINE MIR 2 262 0 1902 130 38 0 chr17 41752125 41752417 -47752136 - AluSq SINE Alu -8 305 3 2028 137 7 0 chr17 41752419 41752711 -47751842 - AluSx SINE Alu -18 294 1 610 295 119 1 chr17 41752830 41753059 -47751494 + MIR SINE MIR 10 262 0 1704 243 26 0 chr17 41753920 41754340 -47750213 + L1ME2 LINE L1 5697 6127 -37 2270 109 0 0 chr17 41754340 41754644 -47749909 - AluSc SINE Alu -5 304 1 596 103 0 0 chr17 41754663 41754741 -47749812 - AluS SINE Alu -234 78 1 1339 107 0 0 chr17 41754752 41754959 -47749594 - AluSg/x SINE Alu 0 310 112 653 157 0 0 chr17 41754959 41755061 -47749492 + AluJo/FRAM SINE Alu 194 295 -17 1857 124 8 53 chr17 41755061 41755416 -47749137 - Tigger2a DNA MER2_type -95 339 1 1842 164 6 6 chr17 41755457 41755768 -47748785 - AluSx SINE Alu -1 311 1 2142 87 10 7 chr17 41755841 41756139 -47748414 + AluSp SINE Alu 1 299 -14 1367 119 5 5 chr17 41756391 41756585 -47747968 + AluSp SINE Alu 1 194 -119 525 120 0 0 chr17 41756586 41756678 -47747875 + (TA)n Simple_repeat Simple_repeat 2 93 0 409 286 18 65 chr17 41756680 41756940 -47747613 - L1MC4a LINE L1 -1949 5859 5611 249 33 0 0 chr17 41756940 41756970 -47747583 + (TG)n Simple_repeat Simple_repeat 2 31 0 409 286 18 65 chr17 41756970 41756985 -47747568 - L1MC4a LINE L1 -2197 5611 5597 2104 108 0 10 chr17 41756987 41757283 -47747270 - AluSc SINE Alu -16 293 1 194 239 209 0 chr17 41757345 41757412 -47747141 + L2 LINE L2 3186 3266 -6 548 44 0 0 chr17 41757492 41757560 -47746993 - AluSp/q SINE Alu -14 299 232 809 98 0 9 chr17 41757561 41757673 -47746880 - AluSp SINE Alu -202 111 1 233 275 88 0 chr17 41757695 41757775 -47746778 + L2 LINE L2 3227 3313 0 1755 171 3 3 chr17 41758159 41758451 -47746102 + AluJb SINE Alu 1 292 -20 2251 79 26 3 chr17 41758616 41758920 -47745633 - AluSp SINE Alu -2 311 1 271 248 71 97 chr17 41759698 41759811 -47744742 - L2 LINE L2 -1 3312 3203 584 279 165 25 chr17 41759919 41760241 -47744312 - L2 LINE L2 -436 2878 2512 580 268 154 5 chr17 41761194 41761414 -47743139 - MIR SINE MIR -3 259 7 181 269 19 0 chr17 41761418 41761470 -47743083 - L2 LINE L2 -346 2967 2915 1442 163 57 0 chr17 41761742 41761987 -47742566 + AluJb SINE Alu 46 304 -8 2116 107 13 0 chr17 41761988 41762288 -47742265 + AluSp SINE Alu 2 305 -8 2131 103 10 3 chr17 41762523 41762823 -47741730 + AluSx SINE Alu 1 302 -10 1949 157 0 7 chr17 41762824 41763130 -47741423 + AluJb SINE Alu 1 304 -8 1034 143 70 105 chr17 41763397 41763655 -47740898 + MIR SINE MIR 14 262 0 299 246 106 91 chr17 41763677 41763814 -47740739 - L1ME LINE L1 -346 5775 5633 2387 80 0 0 chr17 41763814 41764116 -47740437 - AluSc SINE Alu -5 304 3 299 246 106 91 chr17 41764116 41764177 -47740376 - L1ME LINE L1 -488 5633 5574 266 272 130 0 chr17 41765964 41766056 -47738497 + MIR SINE MIR 118 221 -41 368 264 76 103 chr17 41766628 41766839 -47737714 - L1ME4a LINE L1 0 6823 6608 279 0 0 0 chr17 41766839 41766870 -47737683 + (CA)n Simple_repeat Simple_repeat 2 32 0 1926 137 7 0 chr17 41766876 41767160 -47737393 - AluSx SINE Alu -26 286 1 368 264 76 103 chr17 41767160 41767309 -47737244 - L1ME4a LINE L1 -220 6603 1765 1129 126 0 0 chr17 41767566 41767717 -47736836 + AluSx SINE Alu 3 153 -159 301 290 114 98 chr17 41767717 41767972 -47736581 - L1MC4a LINE L1 -1911 5897 5639 2301 101 3 0 chr17 41768027 41768335 -47736218 + AluSq SINE Alu 1 309 -4 280 238 12 38 chr17 41768697 41768777 -47735776 + MIR SINE MIR 111 188 -74 194 288 0 0 chr17 41769235 41769294 -47735259 - L2 LINE L2 -223 3049 2991 183 313 0 0 chr17 41769573 41769621 -47734932 - MIR SINE MIR -6 256 209 2250 98 0 0 chr17 41769698 41769995 -47734558 - AluSc SINE Alu -12 297 1 1512 153 55 25 chr17 41770021 41770296 -47734257 - AluJb SINE Alu -28 284 2 2207 99 3 29 chr17 41770307 41770620 -47733933 - AluSx SINE Alu -6 306 2 213 333 0 0 chr17 41770649 41770727 -47733826 - L2 LINE L2 -298 2974 2897 208 238 244 24 chr17 41770722 41770817 -47733736 + MER5B DNA MER1_type 12 136 -53 * 1306 160 142 59 chr17 41770822 41770932 -47733621 + MER47A DNA MER2_type 1 100 -2223 1722 137 4 0 chr17 41770932 41771223 -47733330 - AluSp SINE Alu 0 313 43 1306 160 142 59 chr17 41771223 41771268 -47733285 + MER47A DNA MER2_type 100 140 -2183 1789 171 10 0 chr17 41771268 41771573 -47732980 + AluJo SINE Alu 1 308 -4 1306 160 142 59 chr17 41771573 41771754 -47732799 + MER47A DNA MER2_type 140 366 0 1910 96 31 34 chr17 41771776 41772067 -47732486 - AluSg SINE Alu -18 292 3 1371 106 45 0 chr17 41773175 41773319 -47731234 - AluSg/x SINE Alu -22 290 133 2181 81 39 0 chr17 41773319 41773604 -47730949 - AluSg SINE Alu -14 296 1 1371 106 45 0 chr17 41773604 41773657 -47730896 - AluSg/x SINE Alu -179 133 84 1963 136 9 25 chr17 41775098 41775415 -47729138 + AluJo SINE Alu 1 312 0 340 393 25 5 chr17 41779815 41780016 -47724537 + MIR SINE MIR 9 213 -49 795 222 127 0 chr17 41782166 41782355 -47722198 + MIR SINE MIR 18 230 -32 354 326 35 7 chr17 41782558 41782702 -47721851 + MIR SINE MIR 36 183 -79 216 399 52 0 chr17 41783631 41783804 -47720749 - L3b LINE CR1 -141 1442 1261 2272 100 33 0 chr17 41784465 41784765 -47719788 - AluSx SINE Alu -2 310 1 377 280 180 45 chr17 41785700 41785900 -47718653 + MIR SINE MIR 7 233 -29 378 296 68 6 chr17 41786191 41786367 -47718186 + L2 LINE L2 2020 2206 -1108 1806 148 7 39 chr17 41786378 41786683 -47717870 - AluJb SINE Alu -17 295 1 712 266 93 13 chr17 41786764 41786916 -47717637 + MIR SINE MIR 2 140 -122 1335 168 133 38 chr17 41786916 41787030 -47717523 + LTR54B LTR ERV1 2 104 -394 2239 104 3 0 chr17 41787030 41787319 -47717234 - AluSp SINE Alu -17 296 7 1335 168 133 38 chr17 41787319 41787456 -47717097 + LTR54B LTR ERV1 104 227 -271 2633 63 0 19 chr17 41787456 41787773 -47716780 + AluY SINE Alu 1 311 0 1335 168 133 38 chr17 41787773 41787973 -47716580 + LTR54B LTR ERV1 227 497 -1 712 266 93 13 chr17 41787973 41788057 -47716496 + MIR SINE MIR 140 257 -5 327 258 115 53 chr17 41788087 41788296 -47716257 + L2 LINE L2 2523 2744 -570 2184 104 4 0 chr17 41788314 41788622 -47715931 + AluSg SINE Alu 1 309 0 244 146 146 0 chr17 41789019 41789067 -47715486 + L2 LINE L2 3237 3291 -22 2443 93 3 3 chr17 41789361 41789671 -47714882 + AluSx SINE Alu 2 311 -1 2221 107 0 46 chr17 41790713 41791039 -47713514 + AluY SINE Alu 1 311 0 2270 104 10 0 chr17 41791773 41792072 -47712481 - AluSp SINE Alu -10 303 2 1510 163 57 0 chr17 41792073 41792318 -47712235 - AluJb SINE Alu -8 304 46 567 264 154 5 chr17 41792646 41792866 -47711687 + MIR SINE MIR 7 259 -3 549 276 165 25 chr17 41793820 41794142 -47710411 + L2 LINE L2 2512 2878 -436 256 221 77 96 chr17 41794259 41794363 -47710190 + L2 LINE L2 3170 3271 -1 2413 84 3 3 chr17 41795141 41795439 -47709114 + AluSp SINE Alu 1 298 -15 684 251 79 20 chr17 41795519 41795722 -47708831 - MER58C DNA MER1_type 0 215 1 1439 168 4 22 chr17 41795886 41796118 -47708435 + AluJo SINE Alu 6 233 -79 263 122 0 0 chr17 41796119 41796160 -47708393 - MADE1 DNA Mariner -38 42 2 * 395 160 27 0 chr17 41796160 41796223 -47708330 + AluJo SINE Alu 233 297 -5 1477 194 48 31 chr17 41796327 41796621 -47707932 - AluJo SINE Alu -13 299 1 730 206 0 0 chr17 41796669 41796800 -47707753 + FLAM_A SINE Alu 1 131 -2 1103 144 5 0 chr17 41796922 41798415 -47706138 + ALR/Alpha Satellite centromeric 1 1500 -48 1140 156 7 1 chr17 41799630 41809075 -47695478 + ALR/Alpha Satellite centromeric 1 9509 -24 280 81 0 0 chr17 41809175 41809212 -47695341 - Alu SINE Alu -262 41 5 378 289 86 10 chr17 41809279 41809476 -47695077 + L1ME1 LINE L1 5879 6090 -76 279 286 143 17 chr17 41809621 41809740 -47694813 - L2 LINE L2 0 3272 3139 1932 151 3 24 chr17 41809807 41810105 -47694448 - AluJb SINE Alu -20 292 1 2012 151 3 3 chr17 41810798 41811109 -47693444 - AluJo SINE Alu -1 311 1 289 295 10 19 chr17 41812186 41812310 -47692243 - MIR SINE MIR -72 136 36 1779 130 45 55 chr17 41812691 41812999 -47691554 - AluJb SINE Alu -7 305 1 236 177 81 16 chr17 41813043 41813105 -47691448 - MIR SINE MIR -61 147 82 328 239 137 17 chr17 41814572 41814689 -47689864 - MIR SINE MIR -62 146 16 189 107 0 0 chr17 41814689 41814717 -47689836 + (T)n Simple_repeat Simple_repeat 1 28 0 1863 88 42 0 chr17 41814717 41814955 -47689598 - AluSq SINE Alu -65 248 1 257 279 72 45 chr17 41816161 41816272 -47688281 - MIR3 SINE MIR -6 202 89 2638 128 7 24 chr17 41816327 41816779 -47687774 - L1MB7 LINE L1 -20 6164 5721 180 196 39 20 chr17 41817751 41817802 -47686751 - MIR SINE MIR -10 252 201 2362 99 0 0 chr17 41817849 41818141 -47686412 + AluSc SINE Alu 1 292 -17 215 59 0 29 chr17 41819021 41819055 -47685498 + (TG)n Simple_repeat Simple_repeat 2 34 0 572 218 115 6 chr17 41819055 41819204 -47685349 - FRAM SINE Alu -143 169 1 22 0 0 0 chr17 41820273 41820295 -47684258 + AT_rich Low_complexity Low_complexity 1 22 0 186 147 88 0 chr17 41823354 41823388 -47681165 - MIR SINE MIR -26 236 200 2525 76 3 0 chr17 41824201 41824503 -47680050 - AluSq SINE Alu -10 303 1 207 0 0 0 chr17 41824509 41824532 -47680021 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1019 76 0 0 chr17 41824532 41824651 -47679902 - AluSq/x SINE Alu -191 121 3 225 0 0 0 chr17 41824965 41824990 -47679563 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 120 0 0 chr17 41826848 41827148 -47677405 - AluSx SINE Alu -12 300 1 490 301 96 13 chr17 41827479 41827718 -47676835 - L2 LINE L2 0 3272 3014 422 254 121 6 chr17 41827930 41828095 -47676458 + MER5A DNA MER1_type 3 186 -3 543 306 48 48 chr17 41828236 41828471 -47676082 + L1ME1 LINE L1 5875 6112 -54 2246 109 3 3 chr17 41828471 41828773 -47675780 + AluSg SINE Alu 1 302 -8 543 306 48 48 chr17 41828773 41828828 -47675725 + L1ME1 LINE L1 6111 6165 -1 2229 119 0 16 chr17 41828843 41829154 -47675399 + AluSg SINE Alu 1 306 -4 1526 215 20 18 chr17 41829160 41829560 -47674993 + L1M4 LINE L1 4794 5194 -952 2248 93 0 66 chr17 41829568 41829901 -47674652 + AluSp SINE Alu 1 311 -2 1879 189 0 3 chr17 41829907 41830209 -47674344 + AluJb SINE Alu 1 301 -11 1424 169 4 35 chr17 41830212 41830467 -47674086 + AluSx SINE Alu 1 247 -65 2384 92 7 0 chr17 41830567 41830871 -47673682 - AluSp SINE Alu -7 306 1 195 129 0 0 chr17 41831071 41831102 -47673451 + (A)n Simple_repeat Simple_repeat 1 31 0 1208 191 47 0 chr17 41833130 41833345 -47671208 - AluJo SINE Alu -9 303 79 2604 71 3 0 chr17 41833439 41833749 -47670804 - AluSp SINE Alu -2 311 1 610 294 20 7 chr17 41834207 41834353 -47670200 + MIR3 SINE MIR 16 163 -45 22 0 0 0 chr17 41834769 41834791 -47669762 + AT_rich Low_complexity Low_complexity 1 22 0 392 194 19 0 chr17 41834936 41835044 -47669509 + CT-rich Low_complexity Low_complexity 2 111 0 185 214 95 48 chr17 41836206 41836290 -47668263 - MIR SINE MIR -67 141 54 1988 142 38 0 chr17 41836399 41836687 -47667866 + AluSx SINE Alu 1 299 -13 244 307 121 52 chr17 41837203 41837434 -47667119 + L2 LINE L2 2691 2937 -377 1944 164 0 26 chr17 41837466 41837777 -47666776 + AluJb SINE Alu 1 303 -9 226 204 61 0 chr17 41838152 41838201 -47666352 - MIR SINE MIR -17 245 194 308 305 91 1 chr17 41838391 41838529 -47666024 + MIR SINE MIR 25 172 -64 1323 121 0 0 chr17 41838532 41838705 -47665848 + AluSg/x SINE Alu 125 297 -15 195 320 40 13 chr17 41838729 41838804 -47665749 + MIR SINE MIR 186 262 0 1227 242 91 18 chr17 41840366 41840751 -47663802 - MER113 DNA MER1_type? 0 521 109 753 243 159 4 chr17 41840789 41841015 -47663538 - MIR SINE MIR 0 262 2 2014 110 43 4 chr17 41841453 41841734 -47662819 - AluJb SINE Alu -20 292 1 606 77 0 0 chr17 41845029 41845107 -47659446 - AluJ/FRAM SINE Alu -9 303 226 2456 86 0 0 chr17 41845993 41846297 -47658256 - AluSx SINE Alu -8 304 1 2304 76 3 3 chr17 41846897 41847210 -47657343 + AluSp SINE Alu 1 313 0 36 40 0 0 chr17 41847288 41847338 -47657215 + AT_rich Low_complexity Low_complexity 1 50 0 677 167 25 25 chr17 41847347 41847467 -47657086 - FLAM_A SINE Alu -13 120 1 1353 155 9 18 chr17 41847814 41848033 -47656520 - AluJo SINE Alu -95 217 1 2419 83 7 0 chr17 41848278 41848578 -47655975 + AluSp SINE Alu 1 302 -11 1371 95 0 0 chr17 41848578 41848747 -47655806 + AluSg/x SINE Alu 134 302 -10 2015 134 3 29 chr17 41849455 41849769 -47654784 - AluJb SINE Alu -6 306 1 192 274 16 16 chr17 41849872 41849934 -47654619 + MIR SINE MIR 141 202 -60 290 171 0 13 chr17 41853263 41853339 -47651214 + (TG)n Simple_repeat Simple_repeat 2 76 0 199 284 216 0 chr17 41853423 41853539 -47651014 + MIR3 SINE MIR 43 183 -25 204 329 0 0 chr17 41853862 41853941 -47650612 + G-rich Low_complexity Low_complexity 1 79 0 1861 88 32 4 chr17 41855204 41855454 -47649099 + AluSx SINE Alu 39 295 -17 2268 99 13 0 chr17 41855810 41856113 -47648440 + AluSp SINE Alu 1 307 -6 244 321 22 95 chr17 41856162 41856299 -47648254 - MER91A DNA MER1_type -40 156 30 259 278 10 62 chr17 41857890 41857987 -47646566 + MIR SINE MIR 58 149 -59 277 254 154 9 chr17 41858700 41858810 -47645743 + MIR SINE MIR 16 141 -67 1217 188 114 111 chr17 41858902 41859042 -47645511 - L1MC5 LINE L1 -60 7901 7763 1669 157 68 20 chr17 41859042 41859335 -47645218 - AluJo SINE Alu -5 307 1 1217 188 114 111 chr17 41859335 41859358 -47645195 - L1MC5 LINE L1 -198 7763 7742 586 94 0 0 chr17 41859358 41859443 -47645110 + L1PA16 LINE L1 6082 6166 0 1217 188 114 111 chr17 41859443 41859891 -47644662 - L1MC5 LINE L1 -219 7742 7287 1557 132 0 9 chr17 41860026 41860254 -47644299 + AluSq SINE Alu 1 226 -87 1006 107 14 0 chr17 41910254 41910394 -47594159 + AluSp/q SINE Alu 161 302 -11 2569 54 0 0 chr17 41910725 41911022 -47593531 + AluY SINE Alu 1 297 -14 370 188 245 0 chr17 41911030 41911166 -47593387 + MIR3 SINE MIR 32 206 -2 2179 112 3 0 chr17 41911918 41912212 -47592341 - AluSq SINE Alu -16 297 3 517 171 11 0 chr17 41912212 41912300 -47592253 - AluJo/FRAM SINE Alu -15 297 209 1604 107 4 76 chr17 41912300 41912562 -47591991 - AluJo SINE Alu -69 243 1 747 166 21 201 chr17 41912642 41912925 -47591628 - MIR SINE MIR 0 262 31 227 154 29 154 chr17 41912988 41913035 -47591518 - L1MC5 LINE L1 -36 7925 7896 2389 106 0 0 chr17 41913035 41913336 -47591217 + AluSx SINE Alu 3 303 -9 227 154 29 154 chr17 41913336 41913392 -47591161 - L1MC5 LINE L1 -65 7896 7835 2022 120 0 31 chr17 41913837 41914157 -47590396 + AluSx SINE Alu 1 311 0 558 234 269 11 chr17 41914190 41914365 -47590188 - MIR SINE MIR 0 262 43 2839 91 41 2 chr17 41914690 41915107 -47589446 + L1MA4A LINE L1 5866 6298 -5 2078 164 27 38 chr17 41915340 41915815 -47588738 - L1ME2 LINE L1 -2 6162 5693 2630 85 42 7 chr17 41915816 41916226 -47588327 - L1MC3 LINE L1 0 7785 7362 553 173 7 17 chr17 41916227 41916373 -47588180 - L1ME2 LINE L1 -460 5702 5561 501 270 31 6 chr17 41916371 41916534 -47588019 - L1M4 LINE L1 -3025 3121 2955 * 660 216 163 7 chr17 41916711 41916864 -47587689 - MER5A DNA MER1_type -2 187 11 395 280 72 24 chr17 41917186 41917311 -47587242 - MER5A DNA MER1_type 0 189 59 348 24 0 0 chr17 41917373 41917414 -47587139 + (CA)n Simple_repeat Simple_repeat 2 42 0 2435 81 0 0 chr17 41917591 41917888 -47586665 + AluY SINE Alu 1 297 -14 540 351 56 36 chr17 41918020 41918410 -47586143 - L2 LINE L2 -493 2821 2424 216 289 195 21 chr17 41918447 41918637 -47585916 - L2 LINE L2 -1048 2266 2044 2601 49 3 0 chr17 41919010 41919315 -47585238 + AluY SINE Alu 1 306 -5 222 217 83 0 chr17 41920038 41920098 -47584455 - MIR SINE MIR 0 262 198 814 73 0 0 chr17 41920210 41920320 -47584233 - MER41C LTR ERV1 0 554 445 1341 169 103 15 chr17 41920955 41921286 -47583267 - L1MB7 LINE L1 0 6184 5825 743 126 0 34 chr17 41921288 41921407 -47583146 - FLAM_A SINE Alu 0 142 28 243 0 0 0 chr17 41921430 41921457 -47583096 + (A)n Simple_repeat Simple_repeat 1 27 0 976 107 29 14 chr17 41921463 41921603 -47582950 + AluJb SINE Alu 161 302 -10 591 209 131 5 chr17 41921606 41921797 -47582756 - L1MB7 LINE L1 -373 5793 5579 503 165 84 26 chr17 41921929 41922084 -47582469 - MLT1E LTR MaLR -369 198 38 1384 188 11 0 chr17 41922105 41922371 -47582182 - L1MB7 LINE L1 -597 5587 5319 255 289 0 0 chr17 41922456 41922532 -47582021 - L1MB7 LINE L1 -1014 5132 5057 576 244 99 45 chr17 41922532 41922733 -47581820 - MIR SINE MIR -31 231 20 207 167 0 0 chr17 41923536 41923578 -47580975 + CT-rich Low_complexity Low_complexity 3 44 0 313 301 151 30 chr17 41923684 41924016 -47580537 - L2 LINE L2 -910 2404 2033 202 71 0 0 chr17 41924119 41924147 -47580406 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 696 153 7 14 chr17 41924147 41924291 -47580262 + CT-rich Low_complexity Low_complexity 1 143 0 1883 158 30 7 chr17 41924308 41924606 -47579947 - AluJb SINE Alu -7 305 1 2227 124 0 0 chr17 41924866 41925164 -47579389 - AluSx SINE Alu -14 298 1 467 346 105 12 chr17 41925169 41925501 -47579052 + L2 LINE L2 2910 3272 0 2444 94 0 0 chr17 41925580 41925879 -47578674 - AluSq SINE Alu -14 299 1 261 0 0 0 chr17 41926873 41926902 -47577651 + (TG)n Simple_repeat Simple_repeat 1 29 0 2202 93 10 0 chr17 41927584 41927873 -47576680 - AluSg SINE Alu -18 292 1 537 86 0 0 chr17 41928123 41928193 -47576360 - AluJ/FRAM SINE Alu -25 287 218 2366 99 0 3 chr17 41928304 41928616 -47575937 + AluSx SINE Alu 1 311 -1 683 119 28 84 chr17 41928757 41928791 -47575762 - L1M3 LINE L1 -348 5823 5789 2255 127 0 0 chr17 41928791 41929099 -47575454 + AluSx SINE Alu 1 308 -4 683 119 28 84 chr17 41929099 41929207 -47575346 - L1M3 LINE L1 -382 5789 5689 2232 99 0 0 chr17 41929264 41929575 -47574978 - AluSx SINE Alu 0 311 1 2248 116 0 0 chr17 41931136 41931438 -47573115 - AluSc SINE Alu -7 302 1 1953 140 3 47 chr17 41931569 41931890 -47572663 - AluSx SINE Alu -5 307 1 1736 246 48 40 chr17 41932146 41933270 -47571283 - L1ME3 LINE L1 0 6239 5026 2400 100 0 0 chr17 41933271 41933571 -47570982 - AluSx SINE Alu -12 300 1 990 192 28 0 chr17 41933573 41933755 -47570798 - AluJo SINE Alu -8 304 118 206 174 22 0 chr17 41933991 41934037 -47570516 + T-rich Low_complexity Low_complexity 1 47 0 455 283 64 0 chr17 41935801 41935974 -47568579 - L1ME3 LINE L1 -3464 2751 2568 * 563 288 45 11 chr17 41935968 41936235 -47568318 - L1ME3 LINE L1 -4330 2066 1791 1980 93 62 3 chr17 41936335 41936624 -47567929 - MER41A LTR ERV1 -248 306 1 217 333 89 15 chr17 41936663 41936798 -47567755 + L2 LINE L2 2943 3087 -185 1217 143 5 11 chr17 41936922 41937111 -47567442 + AluJb SINE Alu 114 301 -11 261 258 76 0 chr17 41937113 41937179 -47567374 + L2 LINE L2 3200 3270 -2 290 65 0 22 chr17 41937346 41937392 -47567161 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1598 193 0 44 chr17 41937960 41938276 -47566277 + AluJb SINE Alu 1 302 -10 2072 122 0 48 chr17 41938279 41938591 -47565962 + AluSx SINE Alu 1 297 -15 2412 103 0 0 chr17 41938593 41938905 -47565648 + AluSq SINE Alu 1 312 -1 180 306 126 27 chr17 41939056 41939167 -47565386 + L2 LINE L2 2940 3061 -252 543 222 99 6 chr17 41939225 41939289 -47565264 + MER5B DNA MER1_type 2 59 -119 2296 108 0 0 chr17 41939289 41939586 -47564967 + AluSx SINE Alu 1 297 -15 543 222 99 6 chr17 41939586 41939683 -47564870 + MER5B DNA MER1_type 59 178 0 1212 94 0 25 chr17 41939815 41939975 -47564578 - AluSg/x SINE Alu -19 291 136 462 319 111 60 chr17 41939979 41940317 -47564236 + L2 LINE L2 1832 2151 -1163 1727 147 41 3 chr17 41940317 41940610 -47563943 - AluJo SINE Alu -8 304 1 462 319 111 60 chr17 41940610 41940892 -47563661 + L2 LINE L2 2151 2484 -830 2449 97 0 0 chr17 41941036 41941344 -47563209 + AluSx SINE Alu 1 308 -4 1191 109 0 0 chr17 41941344 41941500 -47563053 + AluSx SINE Alu 1 156 -156 2030 107 0 4 chr17 41941548 41941841 -47562712 + AluSg SINE Alu 22 313 0 1297 105 0 0 chr17 41941841 41942013 -47562540 + AluSq SINE Alu 131 302 -11 219 350 88 21 chr17 41942196 41942390 -47562163 + L2 LINE L2 2858 3064 -208 595 203 59 0 chr17 41942871 41942989 -47561564 - MIR3 SINE MIR -12 196 72 927 137 0 0 chr17 41943457 41943581 -47560972 + FLAM_C SINE Alu 1 124 -19 527 308 93 14 chr17 41945111 41945325 -47559228 - L3 LINE CR1 -56 1521 1291 230 389 9 0 chr17 41945345 41945453 -47559100 - L3 LINE CR1 -413 1164 1056 664 241 69 34 chr17 41946338 41946437 -47558116 + L1ME LINE L1 4984 5078 -1068 1775 194 3 10 chr17 41946437 41946741 -47557812 - AluJo SINE Alu -9 303 2 664 241 69 34 chr17 41946741 41946903 -47557650 + L1ME LINE L1 5078 5254 -892 1138 123 0 13 chr17 41946911 41947066 -47557487 + AluSx SINE Alu 1 153 -159 1224 199 20 76 chr17 41947078 41947136 -47557417 + L1ME LINE L1 5272 5332 -830 2242 112 23 0 chr17 41947136 41947441 -47557112 + AluSx SINE Alu 1 312 0 1224 199 20 76 chr17 41947441 41947775 -47556778 + L1ME LINE L1 5332 5642 -520 311 179 0 132 chr17 41947817 41947923 -47556630 - L1MC4 LINE L1 -1339 6703 6612 306 226 9 66 chr17 41947905 41948011 -47556542 - L1MC4 LINE L1 -1339 6703 6604 * 418 113 57 40 chr17 41948096 41948273 -47556280 + (TA)n Simple_repeat Simple_repeat 1 180 0 180 0 0 0 chr17 41948396 41948416 -47556137 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 2292 91 7 29 chr17 41948417 41948726 -47555827 - AluSx SINE Alu -10 302 1 2481 70 3 0 chr17 41949070 41949368 -47555185 + AluSp SINE Alu 1 299 -14 991 128 6 32 chr17 41950038 41950194 -47554359 - AluJb SINE Alu -9 303 152 2051 164 0 0 chr17 41950253 41950558 -47553995 - AluJo SINE Alu -7 305 1 2472 73 13 0 chr17 41950636 41950937 -47553616 - AluY SINE Alu -6 305 1 316 287 62 39 chr17 41952466 41952595 -47551958 - L1ME3A LINE L1 -2 6168 6037 1904 82 3 64 chr17 41953200 41953482 -47551071 - AluSp SINE Alu -48 265 1 1308 161 0 36 chr17 41953529 41953752 -47550801 - AluJb SINE Alu -30 282 68 7729 128 124 33 chr17 41953755 41954377 -47550176 - pTR5 LTR ERV1 0 2438 1874 3640 47 2 5 chr17 41954377 41954826 -47549727 + LTR7 LTR ERV1 1 448 -2 7729 128 124 33 chr17 41954826 41955752 -47548801 - pTR5 LTR ERV1 -564 1874 749 452 136 0 0 chr17 41955752 41955818 -47548735 - AluJb SINE Alu -235 77 12 354 255 28 57 chr17 41955867 41955973 -47548580 - MIR SINE MIR -88 120 18 361 269 43 43 chr17 41956292 41956433 -47548120 + L1ME LINE L1 5505 5645 -525 2251 117 0 10 chr17 41956504 41956804 -47547749 - AluSx SINE Alu -15 297 1 755 229 148 0 chr17 41956804 41957014 -47547539 + MER58B DNA MER1_type 77 317 -24 256 246 43 72 chr17 41957036 41957069 -47547484 + L1ME LINE L1 5663 5695 -475 1884 152 9 25 chr17 41957069 41957247 -47547306 - AluJb SINE Alu -1 311 139 2386 111 0 0 chr17 41957247 41957553 -47547000 - AluSx SINE Alu -6 306 1 1884 152 9 25 chr17 41957553 41957690 -47546863 - AluJb SINE Alu -173 139 1 256 246 43 72 chr17 41957690 41957794 -47546759 + L1ME LINE L1 5695 5796 -374 2313 109 3 3 chr17 41958704 41959015 -47545538 - AluSx SINE Alu -1 311 1 1855 138 3 69 chr17 41959031 41959217 -47545336 - AluJo SINE Alu -1 311 155 2420 80 0 7 chr17 41959217 41959517 -47545036 - AluSg SINE Alu -12 298 1 1855 138 3 69 chr17 41959517 41959663 -47544890 - AluJo SINE Alu -157 155 1 2101 142 7 0 chr17 41960045 41960354 -47544199 - AluSx SINE Alu -1 311 1 2348 95 23 0 chr17 41961135 41961441 -47543112 - AluSq SINE Alu 0 313 1 279 0 0 0 chr17 41961897 41961928 -47542625 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 2074 136 0 0 chr17 41961929 41962216 -47542337 - AluSx SINE Alu -25 287 1 26 50 0 0 chr17 41962221 41962261 -47542292 + AT_rich Low_complexity Low_complexity 1 40 0 427 179 13 0 chr17 41962274 41962352 -47542201 - LTR47A LTR ERVL 0 452 374 242 222 0 0 chr17 41962352 41962406 -47542147 + AluJ/monomer SINE Alu 1 54 -249 1542 119 5 0 chr17 41962506 41962716 -47541837 + AluSq SINE Alu 103 313 0 467 77 0 0 chr17 41962749 41962814 -47541739 - LTR47A LTR ERVL -63 389 325 2061 131 35 35 chr17 41962992 41963367 -47541186 + THE1C LTR MaLR 1 375 0 867 142 0 40 chr17 41963482 41963630 -47540923 - FLAM_C SINE Alu -1 142 1 472 265 68 31 chr17 41963695 41963857 -47540696 + MIR3 SINE MIR 2 169 -39 2271 118 7 0 chr17 41964059 41964363 -47540190 + AluSx SINE Alu 1 306 -6 760 154 97 80 chr17 41964605 41964694 -47539859 + MER45A DNA AcHobo 1 87 -1494 2129 96 24 10 chr17 41964694 41964987 -47539566 - AluSq SINE Alu -16 297 1 760 154 97 80 chr17 41964987 41965072 -47539481 + MER45A DNA AcHobo 87 178 0 191 89 0 71 chr17 41965780 41965836 -47538717 + (CCCCG)n Simple_repeat Simple_repeat 2 53 0 321 248 25 50 chr17 41965848 41966009 -47538544 + C-rich Low_complexity Low_complexity 5 161 0 * 406 245 16 49 chr17 41965927 41966111 -47538442 + (CCCCAG)n Simple_repeat Simple_repeat 1 178 0 4234 199 55 47 chr17 41966235 41966375 -47538178 + MER21-int LTR ERV1 2861 2998 -1193 2189 135 3 0 chr17 41966375 41966678 -47537875 - AluSx SINE Alu -8 304 1 2022 133 0 45 chr17 41966680 41966989 -47537564 - AluJb SINE Alu -17 295 1 4234 199 55 47 chr17 41966989 41967878 -47536675 + MER21-int LTR ERV1 2998 3902 -289 572 232 52 76 chr17 41967883 41968094 -47536459 + MER21B LTR ERV1 511 716 -147 2066 134 7 10 chr17 41968097 41968402 -47536151 + AluSq SINE Alu 1 304 -9 258 70 23 0 chr17 41968480 41968523 -47536030 + L1ME4a LINE L1 6074 6117 -4 21 0 0 0 chr17 41968914 41968935 -47535618 + AT_rich Low_complexity Low_complexity 1 21 0 2502 83 0 0 chr17 41969057 41969357 -47535196 + AluSx SINE Alu 8 307 -5 2356 88 27 0 chr17 41970480 41970777 -47533776 + AluSp SINE Alu 1 305 -8 1003 175 80 5 chr17 41970940 41971140 -47533413 + MER58C DNA MER1_type 1 215 0 225 0 0 0 chr17 41971229 41971254 -47533299 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 367 155 0 0 chr17 41971952 41972010 -47532543 + LTR8 LTR ERV1 634 691 0 2217 99 20 0 chr17 41972458 41972750 -47531803 + AluSx SINE Alu 1 298 -14 275 295 84 0 chr17 41973378 41973473 -47531080 - L3 LINE CR1 -185 1392 1290 555 106 0 0 chr17 41973493 41973578 -47530975 - AluJ/FRAM SINE Alu 0 312 228 2239 96 3 3 chr17 41973683 41973975 -47530578 + AluSx SINE Alu 1 292 -20 265 265 121 0 chr17 41974450 41974533 -47530020 - MIR SINE MIR -66 142 50 335 230 132 75 chr17 41974973 41975147 -47529406 - MIR SINE MIR -43 219 36 216 67 0 0 chr17 41975215 41975245 -47529308 + (TCCCC)n Simple_repeat Simple_repeat 2 31 0 1465 111 5 0 chr17 41975679 41975868 -47528685 - AluSp SINE Alu -15 298 109 872 104 17 0 chr17 41975945 41976060 -47528493 - AluSq/x SINE Alu -195 117 1 304 257 10 59 chr17 41977018 41977119 -47527434 + L1MC4 LINE L1 6614 6709 -1333 979 170 11 16 chr17 41977249 41977431 -47527122 - AluJb SINE Alu -131 181 1 1383 224 106 17 chr17 41977432 41977915 -47526638 + L1ME3 LINE L1 5637 6162 0 1716 252 42 54 chr17 41978265 41978791 -47525762 + L2 LINE L2 1683 2203 -1111 2135 115 0 7 chr17 41978791 41979086 -47525467 + AluSg SINE Alu 1 293 -17 1716 252 42 54 chr17 41979086 41979154 -47525399 + L2 LINE L2 2203 2270 -1044 418 314 52 16 chr17 41979206 41979400 -47525153 + L2 LINE L2 3113 3313 0 575 219 95 102 chr17 41979639 41979656 -47524897 - MER20B DNA MER1_type -116 667 651 2275 113 7 0 chr17 41979656 41979957 -47524596 + AluSp SINE Alu 1 303 -10 2308 80 7 0 chr17 41979957 41980243 -47524310 + AluSg SINE Alu 8 295 -15 575 219 95 102 chr17 41980243 41980644 -47523909 - MER20B DNA MER1_type -130 653 251 216 292 0 15 chr17 41980703 41980768 -47523785 - L2 LINE L2 -217 3055 2992 213 245 69 39 chr17 41980768 41980870 -47523683 - L2 LINE L2 -878 2436 2332 285 314 108 0 chr17 41981036 41981138 -47523415 - L2 LINE L2 -576 2738 2626 493 118 0 59 chr17 41981752 41981837 -47522716 + AluSp SINE Alu 114 193 -120 227 97 0 105 chr17 41982060 41982184 -47522369 + (TATATG)n Simple_repeat Simple_repeat 1 111 0 324 94 0 0 chr17 41982284 41982337 -47522216 + (CA)n Simple_repeat Simple_repeat 2 54 0 210 322 40 79 chr17 41982494 41982646 -47521907 - L2 LINE L2 -49 3223 3078 282 309 55 27 chr17 41983423 41983533 -47521020 - L2 LINE L2 -24 3248 3136 902 122 0 23 chr17 41984475 41984606 -47519947 + AluJo/FLAM SINE Alu 2 129 -173 2324 86 3 3 chr17 41984606 41984898 -47519655 - AluSq SINE Alu -21 292 1 1932 125 28 0 chr17 41984898 41985187 -47519366 - AluSx SINE Alu -15 297 1 183 80 0 0 chr17 41986710 41986735 -47517818 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2064 109 7 0 chr17 41986790 41987084 -47517469 + AluSx SINE Alu 1 296 -16 224 289 22 33 chr17 41987335 41987425 -47517128 + L2 LINE L2 3003 3091 -181 1341 59 6 0 chr17 41987900 41988069 -47516484 - AluSp SINE Alu -11 302 133 1633 137 8 19 chr17 41988177 41988439 -47516114 - AluJb SINE Alu -53 259 1 2023 248 14 104 chr17 41988440 41988650 -47515903 - L1ME LINE L1 -4609 1652 1425 797 148 31 0 chr17 41988650 41988778 -47515775 - FLAM_C SINE Alu -1 132 1 2023 248 14 104 chr17 41988778 41988836 -47515717 - L1ME LINE L1 -4836 1425 1363 2241 87 3 16 chr17 41988836 41989146 -47515407 - AluY SINE Alu -5 306 1 2023 248 14 104 chr17 41989146 41990035 -47514518 - L1ME LINE L1 -4898 1363 553 1648 190 10 0 chr17 41990035 41990335 -47514218 - AluJo SINE Alu -9 303 1 2023 248 14 104 chr17 41990335 41990349 -47514204 - L1ME LINE L1 -5708 553 539 693 191 66 0 chr17 41990785 41990921 -47513632 - AluJo/FRAM SINE Alu -9 303 159 1443 164 0 8 chr17 41990921 41991165 -47513388 - AluJb SINE Alu -70 242 1 570 204 122 86 chr17 41991188 41991246 -47513307 - L1ME LINE L1 -5534 536 482 415 237 165 0 chr17 41991246 41991343 -47513210 + MER81 DNA DNA 1 113 -1 570 204 122 86 chr17 41991343 41991505 -47513048 - L1ME LINE L1 -5588 482 308 513 244 8 23 chr17 41991589 41991720 -47512833 - L1ME LINE L1 -5940 130 2 1853 149 7 0 chr17 41992099 41992394 -47512159 + AluJb SINE Alu 1 297 -15 1127 226 186 0 chr17 41992816 41992967 -47511586 + L1MC4 LINE L1 6458 6580 -1462 1818 138 50 3 chr17 41992967 41993265 -47511288 + AluJo SINE Alu 1 312 0 1127 226 186 0 chr17 41993265 41993441 -47511112 + L1MC4 LINE L1 6580 6846 -1196 1103 155 0 58 chr17 41993443 41993649 -47510904 + AluSx SINE Alu 5 198 -114 914 196 31 10 chr17 41993654 41993848 -47510705 + L1MC4 LINE L1 6869 7066 -976 244 213 0 67 chr17 41993908 41993983 -47510570 + L1MC4a LINE L1 7140 7209 -599 777 112 8 16 chr17 41994163 41994288 -47510265 + AluSx SINE Alu 186 309 -1 1276 265 23 64 chr17 41994801 41995078 -47509475 + L2 LINE L2 2895 3149 -164 1755 98 39 0 chr17 41995078 41995333 -47509220 - AluSp SINE Alu -9 304 40 1276 265 23 64 chr17 41995333 41995492 -47509061 + L2 LINE L2 3149 3313 0 1486 162 42 32 chr17 41995542 41995690 -47508863 + MER58B DNA MER1_type 28 173 -2247 1788 150 3 16 chr17 41995690 41995997 -47508556 + AluSg SINE Alu 1 303 -7 1486 162 42 32 chr17 41995997 41996158 -47508395 + MER58B DNA MER1_type 173 341 0 239 322 11 0 chr17 41998391 41998478 -47506075 + MIR SINE MIR 58 145 -117 2089 100 0 7 chr17 41998600 41998925 -47505628 - AluSx SINE Alu 0 312 1 1846 124 21 0 chr17 41998927 41999210 -47505343 - AluJo SINE Alu -23 289 1 342 45 0 0 chr17 42000504 42000548 -47504005 + (TG)n Simple_repeat Simple_repeat 2 45 0 541 288 26 34 chr17 42001519 42001752 -47502801 + L2 LINE L2 3042 3272 0 1310 154 63 42 chr17 42004664 42004949 -47499604 + AluJb SINE Alu 1 291 -21 1770 128 0 92 chr17 42004953 42005281 -47499272 + AluSx SINE Alu 6 303 -9 285 276 90 11 chr17 42005330 42005505 -47499048 - MLT1J LTR MaLR -331 180 91 647 249 30 35 chr17 42005664 42005833 -47498720 - MER5B DNA MER1_type -6 172 5 432 235 0 87 chr17 42006540 42006655 -47497898 + MER45A DNA AcHobo 1 105 -73 1516 148 24 114 chr17 42006655 42006987 -47497566 - AluJb SINE Alu 0 302 1 1702 170 0 7 chr17 42006993 42007287 -47497266 - AluSx SINE Alu -19 293 2 2028 132 0 7 chr17 42007314 42007624 -47496929 + AluSx SINE Alu 3 310 -2 235 169 11 157 chr17 42007624 42007713 -47496840 + MER45A DNA AcHobo 103 178 0 439 277 132 6 chr17 42007998 42008157 -47496396 + MIR3 SINE MIR 30 208 0 184 275 29 43 chr17 42011187 42011256 -47493297 - L2 LINE L2 -20 3293 3226 2164 76 14 3 chr17 42011364 42011653 -47492900 - AluSc SINE Alu -17 292 1 1292 103 10 5 chr17 42012063 42012257 -47492296 + AluSg/x SINE Alu 107 301 -9 4023 66 45 2 chr17 42013458 42013971 -47490582 + LTR8 LTR ERV1 1 535 -156 1588 162 3 69 chr17 42015029 42015363 -47489190 + AluSx SINE Alu 1 312 0 1584 149 73 14 chr17 42015366 42015654 -47488899 + AluSx SINE Alu 1 305 -7 2247 96 0 0 chr17 42016199 42016500 -47488053 + AluSc SINE Alu 1 301 -8 1900 118 29 10 chr17 42016515 42016821 -47487732 + AluSx SINE Alu 1 312 0 2056 109 0 26 chr17 42016955 42017266 -47487287 + AluSx SINE Alu 1 303 -9 27 81 0 0 chr17 42017779 42017841 -47486712 + AT_rich Low_complexity Low_complexity 1 62 0 800 96 70 0 chr17 42017978 42018093 -47486460 + FRAM SINE Alu 44 166 -10 1663 150 11 3 chr17 42020905 42021192 -47483361 + AluSx SINE Alu 1 289 -23 2037 121 3 7 chr17 42021233 42021539 -47483014 + AluSx SINE Alu 1 305 -7 2238 84 14 0 chr17 42021547 42021875 -47482678 + AluSx SINE Alu 6 337 0 335 241 9 74 chr17 42022204 42022312 -47482241 - L2 LINE L2 -222 3050 2950 2390 139 49 40 chr17 42025036 42025488 -47479065 - L1MC3 LINE L1 -126 7659 7204 304 230 23 11 chr17 42025497 42025584 -47478969 - MLT1F1 LTR MaLR -443 124 37 2225 84 3 3 chr17 42025745 42026042 -47478511 - AluSg SINE Alu -13 297 1 373 286 67 51 chr17 42030466 42030644 -47473909 + L2 LINE L2 3084 3264 -8 24 0 0 0 chr17 42030695 42030719 -47473834 + AT_rich Low_complexity Low_complexity 1 24 0 2096 128 0 32 chr17 42030866 42031210 -47473343 - L1PA16 LINE L1 -23 6143 5811 1101 151 103 135 chr17 42031476 42031788 -47472765 - AluJo SINE Alu 0 302 1 222 289 0 0 chr17 42031858 42031910 -47472643 + L2 LINE L2 3210 3261 -11 1872 129 0 45 chr17 42032049 42032359 -47472194 + AluJb SINE Alu 1 296 -16 30 0 0 0 chr17 42032417 42032447 -47472106 + AT_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr17 42032580 42032628 -47471925 + AT_rich Low_complexity Low_complexity 1 48 0 1599 153 16 42 chr17 42032629 42032937 -47471616 + AluJb SINE Alu 1 300 -12 1046 112 0 0 chr17 42033080 42033232 -47471321 + AluSg/x SINE Alu 154 305 -7 799 169 0 22 chr17 42033426 42033562 -47470991 - FLAM_C SINE Alu 0 133 1 740 162 15 15 chr17 42033754 42033890 -47470663 - FLAM_A SINE Alu -1 141 6 246 297 16 0 chr17 42033922 42033986 -47470567 + L2 LINE L2 3208 3272 0 217 0 0 0 chr17 42034905 42034929 -47469624 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2347 82 0 0 chr17 42034929 42035208 -47469345 - AluSq SINE Alu -28 285 7 2759 261 75 73 chr17 42035369 42035844 -47468709 - L1M4 LINE L1 -1218 4928 4455 2270 92 14 0 chr17 42035844 42036137 -47468416 - AluSp SINE Alu -16 297 1 2759 261 75 73 chr17 42036137 42036609 -47467944 - L1M4 LINE L1 -1691 4455 3985 2287 122 3 0 chr17 42036609 42036920 -47467633 - AluSx SINE Alu 0 312 1 2759 261 75 73 chr17 42036920 42037340 -47467213 - L1M4 LINE L1 -2161 3985 3567 2191 134 3 0 chr17 42037340 42037639 -47466914 - AluSx SINE Alu -12 300 1 2759 261 75 73 chr17 42037639 42037689 -47466864 - L1M4 LINE L1 -2579 3567 3519 2381 90 0 0 chr17 42037689 42038011 -47466542 - AluY SINE Alu 0 311 1 2759 261 75 73 chr17 42038011 42038221 -47466332 - L1M4 LINE L1 -2627 3519 3311 2105 150 0 7 chr17 42038221 42038528 -47466025 + AluSx SINE Alu 1 305 -7 2759 261 75 73 chr17 42038528 42038951 -47465602 - L1M4 LINE L1 -2835 3311 2870 1640 148 3 85 chr17 42038957 42039275 -47465278 + AluJb SINE Alu 1 292 -20 1894 149 10 21 chr17 42039291 42039579 -47464974 + AluJo SINE Alu 1 285 -27 301 323 46 99 chr17 42039602 42040036 -47464517 - L1MEd LINE L1 -5488 631 221 2020 104 0 4 chr17 42040244 42040512 -47464041 + AluSq SINE Alu 1 267 -46 438 20 0 0 chr17 42040521 42040572 -47463981 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 424 216 102 60 chr17 42040639 42040806 -47463747 - HAL1 LINE L1 -2333 174 1 342 293 121 6 chr17 42041187 42041361 -47463192 - MER117 DNA MER1_type 0 197 4 805 199 47 6 chr17 42042795 42042966 -47461587 + MER5B DNA MER1_type 1 178 0 337 273 88 21 chr17 42043546 42043595 -47460958 - MIR3 SINE MIR -34 174 130 2030 93 3 84 chr17 42043595 42043906 -47460647 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 42043906 42043934 -47460619 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 337 273 88 21 chr17 42043934 42044048 -47460505 - MIR3 SINE MIR -77 131 2 2460 99 3 0 chr17 42044541 42044853 -47459700 - AluSq SINE Alu 0 313 1 552 291 56 15 chr17 42045246 42045442 -47459111 - MIR SINE MIR -48 214 11 258 204 0 0 chr17 42045441 42045490 -47459063 - L2 LINE L2 -5 3267 3219 * 864 98 15 23 chr17 42045589 42045722 -47458831 + FLAM_C SINE Alu 1 132 -1 1124 136 0 4 chr17 42046298 42046519 -47458034 + AluSx SINE Alu 2 304 -8 644 222 111 19 chr17 42046534 42046750 -47457803 - MIR SINE MIR -7 255 20 22 0 0 0 chr17 42047166 42047188 -47457365 + AT_rich Low_complexity Low_complexity 1 22 0 2205 106 0 64 chr17 42047197 42047527 -47457026 + AluSq SINE Alu 5 313 0 684 85 0 19 chr17 42048035 42048141 -47456412 + AluSg/x SINE Alu 209 312 0 28 0 0 0 chr17 42048388 42048416 -47456137 + AT_rich Low_complexity Low_complexity 1 28 0 418 304 40 34 chr17 42048833 42048981 -47455572 + MIR SINE MIR 20 168 -94 1799 142 6 28 chr17 42048997 42049314 -47455239 + AluSx SINE Alu 1 310 -2 1957 104 43 21 chr17 42049519 42049798 -47454755 + AluSx SINE Alu 6 290 -22 1535 118 4 41 chr17 42050175 42050416 -47454137 + L1MC3 LINE L1 7352 7583 -202 2393 83 7 3 chr17 42050416 42050716 -47453837 + AluSq SINE Alu 1 301 -12 1535 118 4 41 chr17 42050716 42050745 -47453808 + L1MC3 LINE L1 7583 7612 -173 2374 96 3 7 chr17 42050770 42051073 -47453480 - AluSx SINE Alu -10 302 1 1094 104 0 0 chr17 42051073 42051208 -47453345 - AluSq/x SINE Alu -177 135 1 572 289 56 48 chr17 42052147 42052217 -47452336 - MIR SINE MIR -10 252 184 2332 82 0 26 chr17 42052217 42052522 -47452031 - AluY SINE Alu -10 301 5 572 289 56 48 chr17 42052522 42052700 -47451853 - MIR SINE MIR -78 184 2 917 224 160 52 chr17 42053350 42053738 -47450815 + LTR7 LTR ERV1 1 430 -20 2479 66 0 20 chr17 42054613 42054916 -47449637 - AluY SINE Alu -14 297 1 221 225 0 0 chr17 42058845 42058885 -47445668 + polypurine Low_complexity Low_complexity 3 42 0 192 293 141 10 chr17 42061898 42061997 -47442556 - MIR SINE MIR -117 145 34 260 255 255 25 chr17 42062367 42062524 -47442029 + MIR SINE MIR 20 212 -50 211 347 40 45 chr17 42063216 42063392 -47441161 - L3 LINE CR1 -408 1169 995 482 333 104 26 chr17 42063597 42063948 -47440605 + L1ME4a LINE L1 5519 5904 -217 486 184 80 145 chr17 42063961 42064035 -47440518 + L1MC5 LINE L1 7395 7472 -489 2123 123 43 3 chr17 42064035 42064335 -47440218 + AluJb SINE Alu 1 312 0 486 184 80 145 chr17 42064335 42064453 -47440100 + L1MC5 LINE L1 7472 7596 -365 2281 124 0 3 chr17 42064453 42064759 -47439794 + AluSx SINE Alu 1 305 -7 486 184 80 145 chr17 42064759 42064887 -47439666 + L1MC5 LINE L1 7596 7731 -230 2451 88 0 0 chr17 42064887 42065183 -47439370 + AluSq SINE Alu 1 296 -17 2295 103 3 7 chr17 42065192 42065494 -47439059 + AluSg SINE Alu 1 301 -9 486 184 80 145 chr17 42065494 42065574 -47438979 + L1MC5 LINE L1 7739 7780 -181 2530 81 0 3 chr17 42066163 42066473 -47438080 - AluSx SINE Alu -3 309 1 2019 149 0 19 chr17 42067281 42067590 -47436963 + AluJb SINE Alu 1 303 -9 1832 126 0 54 chr17 42067610 42067904 -47436649 + AluSx SINE Alu 18 295 -17 21 0 0 0 chr17 42069868 42069889 -47434664 + GC_rich Low_complexity Low_complexity 1 21 0 316 128 234 32 chr17 42071469 42071563 -47432990 + MIR SINE MIR 120 232 -30 375 311 147 18 chr17 42071660 42071914 -47432639 - L1ME LINE L1 -356 5765 5545 2344 82 3 0 chr17 42071914 42072206 -47432347 - AluSx SINE Alu -15 297 5 375 311 147 18 chr17 42072206 42072347 -47432206 - L1ME LINE L1 -576 5545 5319 2639 49 3 3 chr17 42072797 42073104 -47431449 + AluY SINE Alu 1 307 -4 345 135 0 0 chr17 42073748 42073800 -47430753 + Alu SINE Alu 1 52 -251 1747 145 3 89 chr17 42073800 42074125 -47430428 + AluJb SINE Alu 4 300 -12 442 267 200 0 chr17 42074128 42074308 -47430245 + MIR SINE MIR 25 240 -22 1714 182 7 7 chr17 42074977 42075274 -47429279 - AluJo SINE Alu -15 297 1 298 237 40 0 chr17 42075298 42075374 -47429179 + L2 LINE L2 3226 3304 -9 407 253 169 68 chr17 42075827 42076064 -47428489 + MIR SINE MIR 2 262 0 1720 170 28 7 chr17 42076243 42076526 -47428027 - AluJb SINE Alu -23 289 1 749 194 0 0 chr17 42076531 42076660 -47427893 - FLAM_A SINE Alu -4 129 1 2812 163 26 32 chr17 42076674 42076704 -47427849 - L1MB7 LINE L1 -41 6143 6114 2171 116 7 3 chr17 42076704 42076997 -47427556 + AluSc SINE Alu 1 294 -15 2812 163 26 32 chr17 42076997 42077532 -47427021 - L1MB7 LINE L1 -70 6114 5581 751 282 160 1 chr17 42077982 42078481 -47426072 + L2 LINE L2 2714 3291 -22 805 173 0 0 chr17 42079107 42079240 -47425313 - FLAM_C SINE Alu 0 133 1 509 218 53 8 chr17 42079338 42079471 -47425082 - FLAM_C SINE Alu -1 142 4 1089 160 23 0 chr17 42080029 42080204 -47424349 - AluSg/x SINE Alu 0 312 134 2324 96 3 10 chr17 42080204 42080518 -47424035 - AluSx SINE Alu 0 312 1 1775 151 57 0 chr17 42080821 42081100 -47423453 + AluJo SINE Alu 1 295 -17 210 250 21 0 chr17 42081522 42081570 -47422983 - MER5A DNA MER1_type -113 76 28 1916 169 26 5 chr17 42082063 42082441 -47422112 - MLT1B LTR MaLR -4 386 1 2326 105 0 7 chr17 42084899 42085204 -47419349 + AluSx SINE Alu 1 303 -9 255 224 0 0 chr17 42087289 42087338 -47417215 + Tigger1 DNA MER2_type 27 75 -2343 2211 118 0 0 chr17 42087338 42087635 -47416918 + AluSx SINE Alu 1 297 -15 7724 116 12 51 chr17 42087637 42087863 -47416690 + Tigger1 DNA MER2_type 61 294 -2124 2166 109 7 0 chr17 42087863 42088157 -47416396 + AluSx SINE Alu 1 296 -16 7724 116 12 51 chr17 42088157 42088337 -47416216 + Tigger1 DNA MER2_type 294 479 -1939 1779 154 10 20 chr17 42088337 42088642 -47415911 + AluJb SINE Alu 1 302 -10 7724 116 12 51 chr17 42088642 42088813 -47415740 + Tigger1 DNA MER2_type 479 655 -1763 2251 94 10 0 chr17 42088813 42089101 -47415452 + AluSq SINE Alu 1 291 -22 1567 138 0 4 chr17 42089110 42089341 -47415212 + AluSg/x SINE Alu 71 300 -10 7724 116 12 51 chr17 42089341 42090029 -47414524 + Tigger1 DNA MER2_type 663 1289 -1129 944 133 7 0 chr17 42090035 42090170 -47414383 - AluSg/x SINE Alu -43 269 134 1725 111 71 4 chr17 42090170 42090450 -47414103 + Tigger1 DNA MER2_type 1294 1592 -826 981 127 0 0 chr17 42090452 42090586 -47413967 + AluSq/x SINE Alu 1 134 -178 2242 98 3 0 chr17 42090693 42090980 -47413573 - AluSx SINE Alu -24 288 1 917 93 93 128 chr17 42090980 42091072 -47413481 + Tigger1 DNA MER2_type 2222 2316 -102 1960 125 7 20 chr17 42091072 42091367 -47413186 - AluJb SINE Alu -19 293 3 917 93 93 128 chr17 42091367 42091478 -47413075 + Tigger1 DNA MER2_type 2316 2418 0 2687 74 59 135 chr17 42091978 42092467 -47412086 - MLT2A2 LTR ERVL 0 453 2 2322 106 0 7 chr17 42092906 42093207 -47411346 - AluSx SINE Alu -13 299 1 2100 117 3 0 chr17 42093258 42093563 -47410990 - AluSx SINE Alu 0 306 1 799 191 0 0 chr17 42093717 42093853 -47410700 + FLAM_C SINE Alu 5 140 -3 1845 149 3 20 chr17 42093971 42094103 -47410450 + AluJb SINE Alu 2 135 -177 2389 83 0 0 chr17 42094103 42094393 -47410160 + AluY SINE Alu 1 290 -21 2069 111 3 17 chr17 42094394 42094691 -47409862 + AluSc SINE Alu 1 293 -16 1845 149 3 20 chr17 42094691 42094857 -47409696 + AluJb SINE Alu 134 297 -15 993 132 102 56 chr17 42094886 42095083 -47409470 - MSTA LTR MaLR 0 428 223 4227 135 38 9 chr17 42095186 42095921 -47408632 - L1MC3 LINE L1 -1764 6021 5266 234 189 0 0 chr17 42095932 42096012 -47408541 - Alu SINE Alu 0 330 251 1234 276 54 30 chr17 42096069 42096968 -47407585 + L1MEc LINE L1 1847 2719 -3496 6839 224 29 10 chr17 42097090 42098739 -47405814 - L1M4 LINE L1 -945 5201 3522 1852 205 22 46 chr17 42098790 42099248 -47405305 + MLT1D LTR MaLR 1 447 -58 465 116 0 0 chr17 42099250 42099319 -47405234 - FLAM_C SINE Alu -5 138 70 207 0 0 0 chr17 42099352 42099375 -47405178 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2381 219 19 53 chr17 42099375 42099434 -47405119 - L1M4 LINE L1 -2611 3535 3476 2275 100 0 22 chr17 42099434 42099753 -47404800 + AluSx SINE Alu 1 312 0 2381 219 19 53 chr17 42099753 42100461 -47404092 - L1M4 LINE L1 -2670 3476 2794 2260 82 10 16 chr17 42100482 42100785 -47403768 - AluSg SINE Alu -9 301 1 541 86 86 0 chr17 42100812 42100893 -47403660 + FLAM_A SINE Alu 35 122 -20 1811 235 37 9 chr17 42100921 42101380 -47403173 - L1M4 LINE L1 -3410 2736 2265 1058 128 115 111 chr17 42101543 42101575 -47402978 - MER46A DNA MER2_type -2495 236 206 1235 178 174 15 chr17 42101575 42101834 -47402719 + AluJo SINE Alu 1 300 -2 1058 128 115 111 chr17 42101834 42102036 -47402517 - MER46A DNA MER2_type -2525 206 1 5373 88 8 43 chr17 42102241 42102489 -47402064 - L1PB3 LINE L1 -3 6151 5896 248 0 31 0 chr17 42102489 42102521 -47402032 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1698 171 7 4 chr17 42102522 42102803 -47401750 - AluJb SINE Alu -30 282 1 2095 140 13 0 chr17 42102813 42103121 -47401432 - AluSx SINE Alu 0 312 1 5373 88 8 43 chr17 42103121 42103338 -47401215 - L1PB3 LINE L1 -267 5887 5664 1808 167 3 10 chr17 42103338 42103638 -47400915 + AluJb SINE Alu 1 298 -14 5373 88 8 43 chr17 42103638 42103957 -47400596 - L1PB3 LINE L1 -490 5664 5381 430 194 69 125 chr17 42103957 42103987 -47400566 + MER106A DNA MER1_type 86 116 -120 2078 131 7 0 chr17 42103987 42104278 -47400275 + AluSx SINE Alu 3 295 -17 430 194 69 125 chr17 42104278 42104407 -47400146 + MER106A DNA MER1_type 116 236 0 233 281 35 0 chr17 42104490 42104547 -47400006 + L3 LINE CR1 1504 1562 -15 1430 138 17 30 chr17 42104779 42105011 -47399542 - AluJo SINE Alu -1 311 83 227 288 62 0 chr17 42105011 42105091 -47399462 + MIR3 SINE MIR 103 187 -21 2070 137 0 20 chr17 42105320 42105626 -47398927 + AluJb SINE Alu 1 300 -12 1784 154 0 56 chr17 42105626 42105930 -47398623 + AluSx SINE Alu 1 288 -24 2305 93 3 3 chr17 42106245 42106545 -47398008 - AluSx SINE Alu -12 300 1 1829 111 104 7 chr17 42107470 42107750 -47396803 - AluSq SINE Alu -6 307 1 1283 221 69 74 chr17 42107932 42108325 -47396228 - LTR41 LTR ERVL -6 767 377 2097 113 28 0 chr17 42108332 42108623 -47395930 + AluSq SINE Alu 1 299 -14 900 191 204 0 chr17 42108668 42108888 -47395665 - LTR41 LTR ERVL -508 265 1 1853 150 14 10 chr17 42108964 42109257 -47395296 - AluJo SINE Alu -18 294 1 2231 109 0 0 chr17 42109505 42109811 -47394742 + AluSx SINE Alu 1 306 0 3408 266 16 40 chr17 42109851 42110875 -47393678 - ERVL LTR ERVL -319 5353 4377 2376 88 7 13 chr17 42111139 42111445 -47393108 + AluSq SINE Alu 1 304 -9 484 257 103 46 chr17 42111521 42111739 -47392814 - MIR SINE MIR -28 234 3 2314 104 10 0 chr17 42111962 42112269 -47392284 - AluSx SINE Alu -2 310 1 1730 128 0 119 chr17 42112983 42113336 -47391217 + AluY SINE Alu 1 311 0 4085 204 16 48 chr17 42113453 42113941 -47390612 - MER21B-int LTR ERV1 -1356 2835 2388 1932 179 0 0 chr17 42113941 42114237 -47390316 + AluJb SINE Alu 1 296 -16 4085 204 16 48 chr17 42114237 42114663 -47389890 - MER21B-int LTR ERV1 -1803 2388 1950 1303 252 10 13 chr17 42114663 42114973 -47389580 + MER74B LTR ERVL 238 546 -76 5045 215 23 9 chr17 42115039 42115080 -47389473 - MER21B-int LTR ERV1 -3205 986 947 2005 117 49 78 chr17 42115080 42115289 -47389264 - THE1C LTR MaLR 0 375 180 2459 83 0 0 chr17 42115289 42115590 -47388963 + AluY SINE Alu 1 301 -10 2005 117 49 78 chr17 42115590 42115766 -47388787 - THE1C LTR MaLR -195 180 1 10752 100 28 38 chr17 42115766 42117363 -47387190 - THE1C-int LTR MaLR 0 1580 1 2182 106 57 41 chr17 42117363 42117402 -47387151 - THE1C LTR MaLR 0 375 338 2536 85 0 0 chr17 42117402 42117709 -47386844 + AluY SINE Alu 1 307 -4 2182 106 57 41 chr17 42117709 42118038 -47386515 - THE1C LTR MaLR -37 338 1 5045 215 23 9 chr17 42118038 42118956 -47385597 - MER21B-int LTR ERV1 -3243 948 12 1665 204 87 78 chr17 42118961 42119558 -47384995 - MER21B LTR ERV1 -95 836 98 267 31 0 0 chr17 42119650 42119682 -47384871 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 397 208 10 73 chr17 42119683 42119779 -47384774 - MER21B LTR ERV1 -773 90 1 368 231 46 9 chr17 42119780 42119888 -47384665 - L1ME4a LINE L1 -44 6077 5966 328 266 246 24 chr17 42119992 42120240 -47384313 + L2 LINE L2 3009 3311 -2 1712 137 37 57 chr17 42120308 42120608 -47383945 + AluSx SINE Alu 1 294 -18 1744 135 36 29 chr17 42121412 42121693 -47382860 - AluSx SINE Alu -6 306 24 2089 127 27 12 chr17 42121772 42122019 -47382534 + MER44D DNA MER2_type 2 244 -2247 1691 166 52 38 chr17 42122019 42122362 -47382191 + MER7A DNA MER2_type 1 346 0 2089 127 27 12 chr17 42122362 42122446 -47382107 + MER44D DNA MER2_type 244 608 -1 974 206 0 0 chr17 42122681 42122851 -47381702 + FAM SINE Alu 1 170 -5 2159 109 26 10 chr17 42123270 42123574 -47380979 + AluSx SINE Alu 1 309 -3 1262 203 5 0 chr17 42123660 42123882 -47380671 - MER58A DNA MER1_type 0 224 2 1683 204 81 43 chr17 42125378 42125823 -47378730 - MLT1C LTR MaLR 0 467 6 1791 158 35 0 chr17 42126632 42126917 -47377636 - AluJb SINE Alu -17 295 1 180 111 0 0 chr17 42126949 42126976 -47377577 + (T)n Simple_repeat Simple_repeat 1 27 0 2188 102 0 22 chr17 42127115 42127459 -47377094 - AluY SINE Alu 0 311 1 651 184 147 42 chr17 42127697 42127887 -47376666 - MER63A DNA MER1_type 0 210 1 183 129 0 0 chr17 42128512 42128543 -47376010 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 516 133 57 67 chr17 42128665 42128770 -47375783 + Charlie2 DNA MER1_type 45 148 -2634 866 130 5 32 chr17 42128802 42128987 -47375566 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 211 200 0 0 chr17 42128987 42129022 -47375531 + polypyrimidine Low_complexity Low_complexity 1 35 0 1880 180 10 0 chr17 42129022 42129328 -47375225 - AluJb SINE Alu -3 309 1 333 191 281 0 chr17 42129330 42129419 -47375134 + Charlie2 DNA MER1_type 198 311 -2471 1762 192 74 61 chr17 42129455 42130074 -47374479 + Charlie2 DNA MER1_type 2230 2856 -6 462 257 115 25 chr17 42181752 42181953 -47322600 - MLT1H1 LTR MaLR -322 233 1 310 214 0 26 chr17 42182310 42182388 -47322165 - MIR SINE MIR -47 161 83 369 355 68 8 chr17 42182477 42182728 -47321825 + L2 LINE L2 2565 2830 -484 282 269 106 19 chr17 42182742 42182846 -47321707 + MER20B DNA MER1_type 16 128 -655 2005 156 0 3 chr17 42183331 42183620 -47320933 + AluJb SINE Alu 1 288 -24 970 133 40 0 chr17 42183754 42183904 -47320649 - AluSg/x SINE Alu -7 305 150 603 267 6 19 chr17 42183924 42184085 -47320468 - AluJb SINE Alu -16 296 138 2116 145 10 0 chr17 42184089 42184393 -47320160 - AluSx SINE Alu -5 307 1 288 152 22 0 chr17 42184589 42184635 -47319918 + Alu SINE Alu 1 47 -254 1496 188 13 33 chr17 42184736 42185039 -47319514 + AluJo SINE Alu 12 308 -4 758 175 70 100 chr17 42185300 42185431 -47319122 + AluJo SINE Alu 4 128 -184 2117 123 0 32 chr17 42185431 42185568 -47318985 + AluSx SINE Alu 6 146 -166 2373 67 13 17 chr17 42185568 42185868 -47318685 + AluY SINE Alu 1 299 -12 2117 123 0 32 chr17 42185868 42186040 -47318513 + AluSx SINE Alu 146 305 -7 758 175 70 100 chr17 42186040 42186108 -47318445 + AluJo SINE Alu 128 197 -115 243 250 0 0 chr17 42186218 42186274 -47318279 - FRAM/FAM SINE Alu -80 86 31 299 318 30 45 chr17 42187141 42187273 -47317280 + MER5A DNA MER1_type 59 188 -1 2469 73 0 3 chr17 42187438 42187738 -47316815 - AluY SINE Alu -12 299 1 2118 100 14 0 chr17 42187854 42188134 -47316419 - AluSp SINE Alu -29 284 1 487 259 118 86 chr17 42188515 42188687 -47315866 - HAL1 LINE L1 -5 2502 2320 565 225 100 0 chr17 42188687 42188807 -47315746 - FLAM_A SINE Alu -1 132 1 487 259 118 86 chr17 42188807 42188854 -47315699 - HAL1 LINE L1 -187 2320 2276 860 107 91 0 chr17 42188854 42188975 -47315578 + AluSx SINE Alu 1 132 -180 1733 109 4 0 chr17 42188978 42189207 -47315346 + AluSp SINE Alu 1 230 -83 1401 103 0 20 chr17 42189309 42189504 -47315049 + AluSx SINE Alu 111 301 -9 1502 197 155 33 chr17 42189581 42189864 -47314689 + MER20B DNA MER1_type 275 522 -261 2257 129 0 3 chr17 42189864 42190173 -47314380 - AluSq SINE Alu -5 308 1 1502 197 155 33 chr17 42190173 42190310 -47314243 + MER20B DNA MER1_type 522 641 -142 1565 204 11 11 chr17 42190310 42190589 -47313964 + AluJo SINE Alu 1 279 -33 1502 197 155 33 chr17 42190589 42190619 -47313934 + MER20B DNA MER1_type 641 781 -2 756 99 20 0 chr17 42190646 42190747 -47313806 + AluSg SINE Alu 1 103 -207 972 252 21 99 chr17 42190858 42191068 -47313485 + HAL1 LINE L1 1319 1544 -963 2093 87 0 4 chr17 42191068 42191332 -47313221 + AluSg1 SINE Alu 36 298 -11 1534 137 126 11 chr17 42191334 42191597 -47312956 + AluSg1 SINE Alu 1 293 -16 972 252 21 99 chr17 42191597 42191670 -47312883 + HAL1 LINE L1 1545 1622 -885 1918 121 0 36 chr17 42191670 42191977 -47312576 + AluSx SINE Alu 1 296 -16 972 252 21 99 chr17 42191977 42192066 -47312487 + HAL1 LINE L1 1622 1659 -848 2558 66 3 3 chr17 42192066 42192370 -47312183 + AluSp SINE Alu 1 304 -9 972 252 21 99 chr17 42192370 42192425 -47312128 + HAL1 LINE L1 1659 1717 -790 278 194 77 106 chr17 42192421 42192591 -47311962 + HAL1 LINE L1 1935 2099 -408 * 2212 60 81 7 chr17 42192745 42193029 -47311524 + AluY SINE Alu 1 305 -6 948 84 0 0 chr17 42193141 42193260 -47311293 + AluSg/x SINE Alu 187 305 -7 356 310 14 35 chr17 42193261 42193406 -47311147 + MER5A DNA MER1_type 44 185 -4 1918 171 0 16 chr17 42193544 42193860 -47310693 - AluJb SINE Alu -1 311 1 1499 155 0 40 chr17 42193876 42194128 -47310425 - AluSx SINE Alu -5 307 66 699 224 99 0 chr17 42194153 42194305 -47310248 + MIR SINE MIR 57 223 -39 263 120 0 60 chr17 42194316 42194366 -47310187 - AluSx SINE Alu -229 73 27 1501 161 75 101 chr17 42194781 42195197 -47309356 + Tigger2 DNA MER2_type 2 2690 -28 2108 141 3 0 chr17 42195201 42195507 -47309046 - AluSx SINE Alu -5 307 1 2112 104 7 4 chr17 42195514 42195838 -47308715 - AluY SINE Alu 0 325 1 672 315 5 15 chr17 42195868 42196065 -47308488 + MIR SINE MIR 19 213 -49 1764 146 13 52 chr17 42196074 42196382 -47308171 - AluJo SINE Alu -15 297 2 29 60 0 0 chr17 42196542 42196592 -47307961 + AT_rich Low_complexity Low_complexity 1 50 0 2145 125 3 0 chr17 42196599 42196895 -47307658 + AluSg SINE Alu 1 297 -13 2223 111 0 19 chr17 42196897 42197213 -47307340 + AluSg SINE Alu 1 310 0 2241 71 0 55 chr17 42197423 42197733 -47306820 + AluSg SINE Alu 1 293 -17 282 133 0 0 chr17 42197839 42197884 -47306669 - AluSp SINE Alu -110 193 149 2660 176 64 107 chr17 42197893 42198488 -47306065 + L1MA9 LINE L1 5486 6105 -207 2207 109 7 0 chr17 42198488 42198781 -47305772 + AluSg SINE Alu 1 295 -15 2660 176 64 107 chr17 42198781 42198798 -47305755 + L1MA9 LINE L1 6105 6121 -191 1553 168 7 67 chr17 42198798 42198943 -47305610 + AluJo SINE Alu 1 122 -190 2331 109 6 0 chr17 42198943 42199254 -47305299 + AluSp SINE Alu 1 313 0 1553 168 7 67 chr17 42199254 42199393 -47305160 + AluJo SINE Alu 122 268 -44 2660 176 64 107 chr17 42199393 42199620 -47304933 + L1MA9 LINE L1 6121 6290 -22 22 0 0 0 chr17 42199766 42199788 -47304765 + GC_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr17 42200056 42200083 -47304470 + (CGG)n Simple_repeat Simple_repeat 3 29 0 2210 117 0 0 chr17 42201541 42201858 -47302695 + AluSx SINE Alu 1 317 0 230 189 19 19 chr17 42201858 42201911 -47302642 + MLT1G1 LTR MaLR 533 585 -10 613 302 151 0 chr17 42201930 42202281 -47302272 - L2 LINE L2 -1122 2192 1789 1844 160 0 40 chr17 42202397 42202722 -47301831 + AluSx SINE Alu 1 312 0 2104 105 41 3 chr17 42202726 42203020 -47301533 + AluY SINE Alu 1 305 -6 370 173 0 12 chr17 42203024 42203105 -47301448 + MLT1C LTR MaLR 186 265 -202 643 177 27 0 chr17 42203106 42203253 -47301300 - L1MB4 LINE L1 -13 6167 6017 1651 91 5 0 chr17 42203354 42203564 -47300989 - AluSg SINE Alu -99 211 1 640 208 58 0 chr17 42203565 42203685 -47300868 - FLAM_A SINE Alu -6 127 1 2513 57 0 0 chr17 42203685 42204024 -47300529 - AluY SINE Alu 0 311 1 539 225 141 121 chr17 42204125 42204340 -47300213 - HAL1 LINE L1 -1845 662 453 2298 110 0 7 chr17 42204340 42204650 -47299903 - AluSx SINE Alu -4 308 1 539 225 141 121 chr17 42204650 42204717 -47299836 - HAL1 LINE L1 -2054 453 389 2105 125 0 10 chr17 42204717 42205013 -47299540 - AluSx SINE Alu -14 298 6 539 225 141 121 chr17 42205013 42205232 -47299321 - HAL1 LINE L1 -2118 389 150 1497 148 18 11 chr17 42205333 42205617 -47298936 + L1MC3 LINE L1 7470 7755 -30 207 0 0 0 chr17 42205633 42205656 -47298897 + (TTG)n Simple_repeat Simple_repeat 2 24 0 277 343 0 35 chr17 42207432 42207635 -47296918 + G-rich Low_complexity Low_complexity 1 195 0 1010 206 11 38 chr17 42207886 42208126 -47296427 - L1M4 LINE L1 -957 5189 4955 2451 81 0 0 chr17 42208126 42208422 -47296131 - AluY SINE Alu -15 296 1 1010 206 11 38 chr17 42208422 42208443 -47296110 - L1M4 LINE L1 -1191 4955 4935 1122 130 0 0 chr17 42208480 42208659 -47295894 - AluSg/x SINE Alu 0 310 132 193 277 31 15 chr17 42208707 42208772 -47295781 - L2 LINE L2 -2484 830 765 216 358 106 23 chr17 42208826 42209044 -47295509 - L2 LINE L2 -2783 531 296 2480 74 0 10 chr17 42209638 42209948 -47294605 + AluY SINE Alu 1 307 -4 802 197 0 21 chr17 42209993 42210135 -47294418 + AluJo SINE Alu 3 141 -171 29 0 0 0 chr17 42210235 42210264 -47294289 + AT_rich Low_complexity Low_complexity 1 29 0 2226 111 7 0 chr17 42210266 42210564 -47293989 + AluSp SINE Alu 1 300 -13 490 185 8 77 chr17 42210564 42210610 -47293943 + L1ME3 LINE L1 5930 5978 -184 2554 67 0 6 chr17 42210610 42210922 -47293631 + AluY SINE Alu 1 310 -1 490 185 8 77 chr17 42210922 42211005 -47293548 + L1ME3 LINE L1 5978 6050 -112 766 70 6 187 chr17 42211005 42211176 -47293377 + AluSg/x SINE Alu 131 270 -40 198 0 0 0 chr17 42211177 42211199 -47293354 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 260 290 56 9 chr17 42211200 42211307 -47293246 + L1ME3 LINE L1 6039 6150 -12 2254 114 0 0 chr17 42211378 42211677 -47292876 + AluSx SINE Alu 1 299 -13 694 152 0 0 chr17 42211987 42212092 -47292461 + FRAM SINE Alu 51 155 -21 1907 150 7 10 chr17 42212094 42212394 -47292159 + AluSx SINE Alu 1 299 -13 2170 101 47 3 chr17 42212529 42212827 -47291726 + AluY SINE Alu 1 311 0 1390 187 99 90 chr17 42212926 42213381 -47291172 + LTR64 LTR ERVK 1 459 -99 407 167 17 0 chr17 42213381 42213441 -47291112 + AluS SINE Alu 2 62 -256 2451 74 7 7 chr17 42213543 42213841 -47290712 + AluSg SINE Alu 1 298 -12 618 224 22 72 chr17 42213841 42213926 -47290627 - L2 LINE L2 -912 2402 2314 2189 61 24 30 chr17 42213926 42214221 -47290332 + AluY SINE Alu 1 293 -18 618 224 22 72 chr17 42214221 42214358 -47290195 - L2 LINE L2 -1000 2314 2191 1607 149 18 39 chr17 42214358 42214640 -47289913 + AluJb SINE Alu 1 276 -36 2276 76 17 0 chr17 42214991 42215280 -47289273 + AluSx SINE Alu 1 294 -18 300 263 5 70 chr17 42215964 42216150 -47288403 + C-rich Low_complexity Low_complexity 2 175 0 289 209 47 12 chr17 42216440 42216572 -47287981 + (CGGGG)n Simple_repeat Simple_repeat 1 136 0 204 97 0 0 chr17 42216626 42216657 -47287896 + (CGG)n Simple_repeat Simple_repeat 2 32 0 706 78 0 39 chr17 42216897 42217000 -47287553 + AluSg/x SINE Alu 196 294 -16 1627 167 39 3 chr17 42217283 42217565 -47286988 + AluJo SINE Alu 9 300 -12 819 53 0 0 chr17 42218106 42218219 -47286334 + (CA)n Simple_repeat Simple_repeat 2 114 0 214 243 14 14 chr17 42218405 42218475 -47286078 + (CGG)n Simple_repeat Simple_repeat 1 70 0 25 65 0 0 chr17 42218581 42218627 -47285926 + GC_rich Low_complexity Low_complexity 1 46 0 372 264 215 0 chr17 42219173 42219317 -47285236 + MIR SINE MIR 78 252 -10 344 327 18 70 chr17 42219988 42220278 -47284275 - L2 LINE L2 -17 3255 2925 2030 141 0 34 chr17 42220278 42220395 -47284158 + AluSx SINE Alu 1 120 -192 2420 56 0 43 chr17 42220395 42220700 -47283853 + AluY SINE Alu 1 292 -19 2030 141 0 34 chr17 42220700 42220902 -47283651 + AluSx SINE Alu 120 309 -3 411 146 0 0 chr17 42221066 42221121 -47283432 + AluSg/x SINE Alu 214 268 -44 418 245 216 29 chr17 42221637 42221845 -47282708 - MIR SINE MIR -8 254 8 978 119 0 0 chr17 42222404 42222538 -47282015 + FLAM_C SINE Alu 10 143 0 2137 145 0 0 chr17 42222582 42222885 -47281668 - AluSx SINE Alu -3 309 7 1383 83 0 33 chr17 42223726 42223907 -47280646 - AluSg/x SINE Alu -18 292 118 715 135 18 0 chr17 42223907 42224018 -47280535 - AluSg/x SINE Alu -14 298 186 26 0 0 0 chr17 42224300 42224326 -47280227 + AT_rich Low_complexity Low_complexity 1 26 0 2097 117 32 16 chr17 42224331 42224639 -47279914 - AluSq SINE Alu 0 313 1 608 189 63 0 chr17 42224660 42224771 -47279782 - FLAM_C SINE Alu -15 118 1 605 98 0 0 chr17 42225623 42225705 -47278848 - AluSp/q SINE Alu -16 297 216 737 154 0 18 chr17 42225838 42225948 -47278605 + FLAM_A SINE Alu 9 116 -26 2267 110 3 3 chr17 42225959 42226260 -47278293 - AluSx SINE Alu -11 301 1 1502 112 25 0 chr17 42226419 42226646 -47277907 - AluSg/x SINE Alu 0 314 83 2299 71 44 10 chr17 42226877 42227174 -47277379 - AluSg SINE Alu -3 307 1 2374 62 6 52 chr17 42227511 42227835 -47276718 - AluY SINE Alu -2 309 1 1467 146 120 26 chr17 42228956 42229223 -47275330 - AluJb SINE Alu -20 292 1 26 30 0 0 chr17 42229478 42229511 -47275042 + AT_rich Low_complexity Low_complexity 1 33 0 2245 92 0 7 chr17 42229611 42229903 -47274650 - AluSc SINE Alu -19 290 1 720 180 0 0 chr17 42230052 42230163 -47274390 + AluJb SINE Alu 183 293 -19 27 29 0 0 chr17 42230176 42230210 -47274343 + AT_rich Low_complexity Low_complexity 1 34 0 914 142 0 0 chr17 42230229 42230356 -47274197 - AluSq/x SINE Alu -179 133 7 219 278 10 72 chr17 42230434 42230531 -47274022 + MER5A DNA MER1_type 93 183 -6 * 327 361 38 19 chr17 42230527 42230685 -47273868 - L2 LINE L2 -616 2698 2538 268 203 0 78 chr17 42230725 42230789 -47273764 - Tigger5 DNA MER2_type 0 2323 2265 250 211 19 0 chr17 42230805 42230857 -47273696 - Tigger5 DNA MER2_type -2131 192 140 2261 97 10 10 chr17 42230860 42231169 -47273384 - AluSg SINE Alu -1 309 1 782 142 24 24 chr17 42231190 42231317 -47273236 - FLAM_C SINE Alu -16 127 1 529 167 22 0 chr17 42231319 42231409 -47273144 - Tigger5 DNA MER2_type -2231 92 1 212 350 60 47 chr17 42231569 42231788 -47272765 - L2 LINE L2 -635 2679 2451 1615 179 7 30 chr17 42231788 42232090 -47272463 + AluJb SINE Alu 1 295 -17 212 350 60 47 chr17 42232090 42232256 -47272297 - L2 LINE L2 -863 2451 2289 2121 121 17 0 chr17 42232802 42233091 -47271462 - AluSx SINE Alu -18 294 1 1874 128 85 0 chr17 42233326 42233607 -47270946 - AluSx SINE Alu -7 305 1 518 244 63 0 chr17 42233716 42233843 -47270710 - FLAM_A SINE Alu -7 135 1 339 53 0 4 chr17 42234155 42234363 -47270190 + AluY SINE Alu 1 299 -1 1699 168 46 0 chr17 42234530 42234815 -47269738 + AluJo SINE Alu 1 298 -14 321 26 0 0 chr17 42234839 42234877 -47269676 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 279 207 17 chr17 42234905 42235084 -47269469 - L2 LINE L2 -2156 1158 946 2434 76 3 3 chr17 42235163 42235467 -47269086 + AluY SINE Alu 1 304 -7 282 180 0 33 chr17 42235469 42235530 -47269023 - L1MB8 LINE L1 -10 6168 6110 1239 155 13 71 chr17 42235541 42235634 -47268919 + AluJo SINE Alu 21 118 -194 1825 188 3 3 chr17 42235634 42235943 -47268610 - AluSx SINE Alu -3 309 1 1239 155 13 71 chr17 42235943 42236088 -47268465 + AluJo SINE Alu 118 245 -67 2293 87 10 3 chr17 42237114 42237412 -47267141 - AluSg SINE Alu -10 300 1 876 86 0 135 chr17 42237412 42237566 -47266987 - AluSg1 SINE Alu -174 135 2 242 200 316 0 chr17 42238650 42238745 -47265808 + MIR SINE MIR 20 144 -64 2223 106 0 3 chr17 42239845 42240148 -47264405 + AluSx SINE Alu 1 302 -10 435 232 11 0 chr17 42240151 42240246 -47264307 + MIR SINE MIR 47 142 -66 2274 101 0 0 chr17 42240359 42240667 -47263886 - AluSx SINE Alu -4 308 1 1979 115 14 0 chr17 42241297 42241599 -47262954 - AluSx SINE Alu 0 306 1 949 200 60 0 chr17 42241704 42241904 -47262649 + MER63B DNA MER1_type 1 212 -224 1895 132 0 67 chr17 42241921 42242072 -47262481 + AluSx SINE Alu 1 161 -151 1959 109 0 0 chr17 42242072 42242337 -47262216 + AluSg SINE Alu 46 310 0 1895 132 0 67 chr17 42242337 42242503 -47262050 + AluSx SINE Alu 161 337 25 2172 91 3 39 chr17 42242503 42242810 -47261743 + AluSx SINE Alu 1 296 -16 2866 9 0 0 chr17 42242810 42243128 -47261425 + AluYb8 SINE Alu 1 318 0 2161 106 13 19 chr17 42243541 42243853 -47260700 - AluSg SINE Alu 0 310 1 1954 109 4 7 chr17 42245207 42245483 -47259070 - AluSq SINE Alu -37 276 2 21 0 0 0 chr17 42245801 42245822 -47258731 + AT_rich Low_complexity Low_complexity 1 21 0 2334 112 0 0 chr17 42246338 42246650 -47257903 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 42247416 42247437 -47257116 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 42247997 42248020 -47256533 + GC_rich Low_complexity Low_complexity 1 23 0 466 188 8 8 chr17 42249452 42249569 -47254984 + CT-rich Low_complexity Low_complexity 2 118 0 1810 82 114 0 chr17 42250667 42250947 -47253606 + AluSq SINE Alu 1 312 -1 2351 61 7 3 chr17 42251663 42251960 -47252593 + AluSc SINE Alu 1 298 -11 1412 116 123 126 chr17 42252191 42252493 -47252060 + AluJo SINE Alu 1 301 -1 2177 82 13 7 chr17 42254137 42254441 -47250112 + AluY SINE Alu 2 307 -4 279 0 0 0 chr17 42254519 42254550 -47250003 + (TG)n Simple_repeat Simple_repeat 2 32 0 753 111 0 0 chr17 42254585 42254684 -47249869 - AluSq/x SINE Alu -177 135 37 456 156 43 106 chr17 42254717 42254751 -47249802 - MER20B DNA MER1_type 0 783 748 1449 201 24 24 chr17 42254751 42255049 -47249504 - AluJo SINE Alu -14 298 1 456 156 43 106 chr17 42255049 42255155 -47249398 - MER20B DNA MER1_type -35 748 652 1451 178 123 0 chr17 42255371 42255647 -47248906 - AluJb SINE Alu -2 310 1 2100 103 0 17 chr17 42255742 42256044 -47248509 - AluSx SINE Alu -15 297 1 560 204 42 110 chr17 42256651 42256773 -47247780 - MER5B DNA MER1_type 0 178 49 2146 117 13 0 chr17 42256773 42257082 -47247471 - AluSq SINE Alu 0 313 1 1912 127 31 10 chr17 42257086 42257378 -47247175 - AluSx SINE Alu -14 298 1 560 204 42 110 chr17 42257378 42257441 -47247112 - MER5B DNA MER1_type -132 46 1 2086 87 0 7 chr17 42259636 42259913 -47244640 + AluSx SINE Alu 24 298 -14 757 198 60 44 chr17 42259959 42260141 -47244412 + MER5A DNA MER1_type 5 189 0 2048 113 17 3 chr17 42260208 42260509 -47244044 + AluSx SINE Alu 1 305 -7 273 75 0 0 chr17 42263344 42263384 -47241169 + (CA)n Simple_repeat Simple_repeat 2 41 0 389 336 12 12 chr17 42263976 42264136 -47240417 - MIR3 SINE MIR -7 201 41 308 213 8 57 chr17 42264328 42264450 -47240103 + (CGGGG)n Simple_repeat Simple_repeat 3 118 0 21 0 0 0 chr17 42264575 42264596 -47239957 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 42264624 42264654 -47239899 + GC_rich Low_complexity Low_complexity 1 30 0 27 73 0 0 chr17 42265032 42265087 -47239466 + GC_rich Low_complexity Low_complexity 1 55 0 230 270 144 9 chr17 42266314 42266425 -47238128 + L2 LINE L2 3145 3270 -2 261 297 0 0 chr17 42267067 42267202 -47237351 + CT-rich Low_complexity Low_complexity 1 135 0 2234 108 0 0 chr17 42268015 42268320 -47236233 + AluSx SINE Alu 1 305 -7 627 232 100 26 chr17 42268368 42268558 -47235995 + MIR SINE MIR 11 214 -48 1787 155 3 50 chr17 42269455 42269778 -47234775 + AluJb SINE Alu 1 308 -4 180 309 148 12 chr17 42269856 42269937 -47234616 + MIR3 SINE MIR 6 97 -111 626 164 8 0 chr17 42270792 42270914 -47233639 + CT-rich Low_complexity Low_complexity 3 125 0 256 232 20 0 chr17 42270932 42271031 -47233522 + CT-rich Low_complexity Low_complexity 2 102 0 374 267 38 9 chr17 42272744 42272849 -47231704 + MIR SINE MIR 34 141 -121 233 265 169 0 chr17 42275534 42275617 -47228936 + MIR SINE MIR 51 147 -61 1966 96 11 11 chr17 42277163 42277444 -47227109 - AluSx SINE Alu -13 299 19 259 204 171 68 chr17 42277498 42277586 -47226967 + MIR SINE MIR 57 153 -109 1831 129 3 35 chr17 42277688 42277833 -47226720 - AluSg SINE Alu -33 277 144 2285 68 3 3 chr17 42277833 42278127 -47226426 - AluY SINE Alu -17 294 1 1831 129 3 35 chr17 42278127 42278267 -47226286 - AluSg SINE Alu -166 144 1 1120 69 7 0 chr17 42278268 42278412 -47226141 - AluSp SINE Alu -167 146 2 241 337 21 11 chr17 42279347 42279442 -47225111 + MIR SINE MIR 58 153 -109 236 339 91 43 chr17 42279773 42279959 -47224594 + L2 LINE L2 3017 3211 -61 249 254 32 0 chr17 42280019 42280082 -47224471 - L2 LINE L2 0 3313 3249 1713 147 0 97 chr17 42280115 42280240 -47224313 + AluJb SINE Alu 1 137 -165 2181 89 7 3 chr17 42280240 42280531 -47224022 - AluSx SINE Alu -16 296 5 1713 147 0 97 chr17 42280531 42280546 -47224007 + AluJb SINE Alu 137 152 -150 2208 88 7 0 chr17 42280546 42280842 -47223711 - AluSp SINE Alu -15 298 1 1713 147 0 97 chr17 42280842 42281019 -47223534 + AluJb SINE Alu 152 288 -14 593 342 31 5 chr17 42281174 42281370 -47223183 + MIR SINE MIR 36 236 -26 708 161 3 17 chr17 42281950 42282309 -47222244 + (CA)n Simple_repeat Simple_repeat 1 353 0 620 148 0 24 chr17 42282320 42282489 -47222064 + (CA)n Simple_repeat Simple_repeat 1 165 0 437 279 12 99 chr17 42282630 42282740 -47221813 + MIR SINE MIR 67 158 -104 2134 97 7 13 chr17 42282740 42283040 -47221513 - AluSx SINE Alu -14 298 1 437 279 12 99 chr17 42283040 42283101 -47221452 + MIR SINE MIR 158 223 -39 262 296 3 50 chr17 42283907 42284181 -47220372 + C-rich Low_complexity Low_complexity 1 261 0 1832 54 0 0 chr17 42287256 42287478 -47217075 + AluY SINE Alu 90 311 0 2066 106 3 3 chr17 42287495 42287788 -47216765 + AluSg SINE Alu 1 293 -17 2357 97 3 0 chr17 42287790 42288090 -47216463 + AluSp SINE Alu 1 301 -12 2369 59 0 21 chr17 42288091 42288378 -47216175 + AluY SINE Alu 2 313 0 247 32 0 0 chr17 42288378 42288409 -47216144 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2228 124 7 0 chr17 42288410 42288708 -47215845 + AluSx SINE Alu 1 300 -12 698 199 85 0 chr17 42288723 42288904 -47215649 + MIR SINE MIR 57 251 -11 1197 174 29 92 chr17 42288982 42289113 -47215440 + AluJo SINE Alu 3 141 -161 2583 77 0 0 chr17 42289113 42289424 -47215129 + AluY SINE Alu 1 311 0 1197 174 29 92 chr17 42289424 42289522 -47215031 + AluJo SINE Alu 141 244 -58 2127 136 0 16 chr17 42289522 42289659 -47214894 + AluSx SINE Alu 1 139 -173 2225 85 41 3 chr17 42289659 42289952 -47214601 + AluSq SINE Alu 1 304 -9 2127 136 0 16 chr17 42289952 42290122 -47214431 + AluSx SINE Alu 139 303 -9 2275 100 0 32 chr17 42290129 42290439 -47214114 + AluY SINE Alu 1 300 -11 1197 174 29 92 chr17 42290439 42290516 -47214037 + AluJo SINE Alu 250 298 -4 218 239 42 14 chr17 42290565 42290636 -47213917 + L2 LINE L2 2952 3024 -248 1697 186 7 20 chr17 42290662 42290827 -47213726 - AluJb SINE Alu -13 299 138 2381 88 3 0 chr17 42290827 42291124 -47213429 - AluSp SINE Alu -13 300 3 1697 186 7 20 chr17 42291124 42291259 -47213294 - AluJb SINE Alu -174 138 3 233 299 219 25 chr17 42291380 42291581 -47212972 - L2 LINE L2 -246 3067 2828 302 336 117 42 chr17 42291687 42291970 -47212583 + L2 LINE L2 2946 3249 -23 361 293 127 44 chr17 42292050 42292231 -47212322 - MIR SINE MIR -44 218 23 783 154 86 12 chr17 42292673 42292835 -47211718 + MER5B DNA MER1_type 1 174 -4 345 47 0 0 chr17 42293055 42293098 -47211455 + (CGG)n Simple_repeat Simple_repeat 2 44 0 908 128 0 0 chr17 42293836 42293969 -47210584 - FLAM_C SINE Alu 0 133 1 1638 177 3 47 chr17 42294080 42294266 -47210287 - AluJb SINE Alu -4 308 140 510 17 0 0 chr17 42294266 42294325 -47210228 + (TA)n Simple_repeat Simple_repeat 2 60 0 1638 177 3 47 chr17 42294325 42294460 -47210093 - AluJb SINE Alu -172 140 1 2246 79 0 26 chr17 42294469 42294774 -47209779 - AluY SINE Alu -14 297 1 2138 129 0 11 chr17 42295145 42295455 -47209098 + AluSx SINE Alu 1 307 0 365 320 16 8 chr17 42298603 42298731 -47205822 - MIR3 SINE MIR -8 200 72 2231 111 7 3 chr17 42298772 42299069 -47205484 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 42302256 42302280 -47202273 + (TG)n Simple_repeat Simple_repeat 1 24 0 1788 142 16 62 chr17 42303426 42303735 -47200818 + AluSx SINE Alu 1 295 -17 2201 118 0 7 chr17 42303736 42304033 -47200520 + AluSx SINE Alu 1 295 -17 910 207 6 0 chr17 42304147 42304305 -47200248 + AluSg/x SINE Alu 136 295 -10 2282 116 0 0 chr17 42304305 42304623 -47199930 + AluYb8 SINE Alu 1 318 0 2321 102 7 0 chr17 42304634 42304929 -47199624 + AluSc SINE Alu 1 297 -12 24 32 0 0 chr17 42304976 42305007 -47199546 + AT_rich Low_complexity Low_complexity 1 31 0 561 162 144 9 chr17 42305014 42305125 -47199428 - FLAM_C SINE Alu -16 127 2 379 216 60 37 chr17 42305146 42305280 -47199273 + MER63 DNA MER1_type 925 1061 0 2516 63 0 10 chr17 42305632 42305931 -47198622 - AluY SINE Alu -15 296 1 2482 80 7 0 chr17 42305931 42306233 -47198320 - AluSx SINE Alu -8 304 1 224 281 16 0 chr17 42306248 42306312 -47198241 + L2 LINE L2 2995 3059 -213 437 322 54 41 chr17 42306456 42306698 -47197855 - L2 LINE L2 -8 3264 3020 409 205 123 76 chr17 42307493 42307560 -47196993 + MER5A DNA MER1_type 9 71 -118 910 203 18 0 chr17 42307560 42307723 -47196830 + FAM SINE Alu 1 166 -9 409 205 123 76 chr17 42307723 42307826 -47196727 + MER5A DNA MER1_type 71 187 -2 1241 93 12 0 chr17 42307826 42307988 -47196565 + AluSq SINE Alu 135 298 -15 227 220 193 28 chr17 42309043 42309152 -47195401 + MIR SINE MIR 136 262 0 26 50 0 0 chr17 42309536 42309576 -47194977 + GC_rich Low_complexity Low_complexity 1 40 0 266 300 70 0 chr17 42309758 42309858 -47194695 - MER91A DNA MER1_type 0 196 90 224 253 100 80 chr17 42309862 42310012 -47194541 - MER91A DNA MER1_type -25 171 19 522 0 0 0 chr17 42312301 42312359 -47192194 + (TG)n Simple_repeat Simple_repeat 2 59 0 1996 111 46 0 chr17 42313843 42314123 -47190430 + AluSx SINE Alu 1 293 -19 2264 81 0 18 chr17 42314387 42314697 -47189856 - AluY SINE Alu 0 305 1 696 296 26 75 chr17 42314759 42314879 -47189674 + L2 LINE L2 2319 2443 -871 2093 114 7 0 chr17 42314879 42315150 -47189403 - AluSx SINE Alu -39 273 1 696 296 26 75 chr17 42315150 42315445 -47189108 + L2 LINE L2 2443 2714 -600 477 135 4 3 chr17 42315446 42315669 -47188884 + AluJo SINE Alu 2 302 -10 396 155 0 0 chr17 42315677 42315748 -47188805 + GA-rich Low_complexity Low_complexity 4 74 0 649 242 38 0 chr17 42315750 42315907 -47188646 + L1ME3 LINE L1 5732 5894 -268 1947 155 3 22 chr17 42315907 42315965 -47188588 + AluJo SINE Alu 1 59 -253 5137 74 36 78 chr17 42315965 42316827 -47187726 + LTR12 LTR ERV1 1 826 0 1947 155 3 22 chr17 42316827 42316909 -47187644 + AluJo SINE Alu 59 141 -171 1790 175 3 10 chr17 42316909 42317045 -47187508 + AluJb SINE Alu 1 136 -176 2343 79 17 0 chr17 42317045 42317337 -47187216 + AluSp SINE Alu 1 297 -16 2228 103 0 10 chr17 42317337 42317638 -47186915 + AluSg1 SINE Alu 1 298 -11 1790 175 3 10 chr17 42317638 42317803 -47186750 + AluJb SINE Alu 134 301 -11 1947 155 3 22 chr17 42317803 42317977 -47186576 + AluJo SINE Alu 141 310 -2 2164 101 0 24 chr17 42317977 42318274 -47186279 + AluSc SINE Alu 1 290 -19 2507 51 0 0 chr17 42318274 42318570 -47185983 + AluY SINE Alu 1 296 -15 1619 109 5 0 chr17 42318574 42318784 -47185769 + AluSp SINE Alu 1 211 -102 235 26 0 0 chr17 42319064 42319102 -47185451 - Alu SINE Alu 0 300 263 461 341 0 0 chr17 42319191 42319326 -47185227 - L2 LINE L2 -316 2997 2863 2246 93 3 27 chr17 42320222 42320522 -47184031 + AluSx SINE Alu 1 293 -19 650 85 0 11 chr17 42320726 42320820 -47183733 - HY4 scRNA scRNA 0 93 1 1077 93 0 14 chr17 42321341 42321480 -47183073 + AluSq/x SINE Alu 1 137 -175 511 95 0 14 chr17 42321487 42321561 -47182992 + tRNA-Arg-CGA tRNA tRNA 1 73 -3 2315 83 0 0 chr17 42321569 42321846 -47182707 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr17 42321851 42321871 -47182682 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1224 209 0 97 chr17 42321876 42322196 -47182357 + AluJo SINE Alu 2 290 -12 2253 74 32 0 chr17 42322338 42322621 -47181932 + AluY SINE Alu 1 292 -19 1032 146 0 30 chr17 42322621 42322786 -47181767 + AluSq SINE Alu 134 293 -20 750 244 104 0 chr17 42323121 42323342 -47181211 + MIR SINE MIR 17 260 -2 939 160 17 6 chr17 42323479 42323654 -47180899 + MER5A DNA MER1_type 13 189 0 1602 177 35 7 chr17 42323684 42323967 -47180586 - AluJb SINE Alu -21 291 1 2277 80 23 17 chr17 42324343 42324642 -47179911 - AluSx SINE Alu -9 303 3 257 321 37 9 chr17 42324845 42324954 -47179599 + MIR3 SINE MIR 96 207 -1 1003 84 7 0 chr17 42326639 42326782 -47177771 - L1PA16 LINE L1 -9 6157 6014 203 111 0 44 chr17 42326924 42326969 -47177584 + (GGGAGA)n Simple_repeat Simple_repeat 6 48 0 1761 136 21 0 chr17 42327403 42327645 -47176908 - AluSx SINE Alu -65 247 1 473 345 0 7 chr17 42327675 42327817 -47176736 - MER115 DNA AcHobo -413 280 140 2433 88 7 0 chr17 42328807 42329112 -47175441 + AluSp SINE Alu 1 307 -6 2321 98 7 0 chr17 42330280 42330585 -47173968 + AluY SINE Alu 1 307 -4 744 181 14 100 chr17 42330819 42331029 -47173524 - AluJo SINE Alu -119 193 2 234 128 0 0 chr17 42331501 42331540 -47173013 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 2139 148 0 0 chr17 42332029 42332339 -47172214 + AluSx SINE Alu 1 310 -2 1146 159 0 0 chr17 42332339 42332509 -47172044 + AluSg/x SINE Alu 134 303 -9 210 71 0 0 chr17 42332566 42332594 -47171959 + (A)n Simple_repeat Simple_repeat 1 28 0 2312 95 7 3 chr17 42332796 42333102 -47171451 + AluSg1 SINE Alu 1 307 -2 1619 189 7 14 chr17 42334161 42334458 -47170095 - AluJo SINE Alu -12 300 6 344 272 117 33 chr17 42334492 42334705 -47169848 + L2 LINE L2 2831 3061 -252 1919 129 18 14 chr17 42334797 42335106 -47169447 + AluSx SINE Alu 1 310 0 2273 87 21 0 chr17 42335112 42335401 -47169152 + AluSp SINE Alu 1 295 -18 941 173 27 0 chr17 42335401 42335551 -47169002 + AluJb SINE Alu 83 236 -76 1485 199 78 0 chr17 42335611 42335893 -47168660 + AluJo SINE Alu 1 304 -8 385 141 11 98 chr17 42335893 42335985 -47168568 + L2 LINE L2 3230 3313 0 544 225 39 0 chr17 42336010 42336139 -47168414 + L1MC/D LINE L1 5621 5754 -2054 2842 23 0 0 chr17 42336203 42336513 -47168040 + AluYa5 SINE Alu 1 310 -1 677 249 169 52 chr17 42337267 42337592 -47166961 + L2 LINE L2 2902 3264 -8 267 309 125 0 chr17 42338005 42338130 -47166423 + MIR SINE MIR 23 147 -61 2275 109 7 0 chr17 42338346 42338639 -47165914 + AluSq SINE Alu 3 297 -16 186 191 0 0 chr17 42340880 42340927 -47163626 + GA-rich Low_complexity Low_complexity 3 49 0 322 314 71 11 chr17 42342297 42342455 -47162098 + MIR SINE MIR 8 149 -59 265 281 61 35 chr17 42345203 42345317 -47159236 - MIR3 SINE MIR -8 200 84 2142 107 7 0 chr17 42345409 42345708 -47158845 + AluSx SINE Alu 2 302 -10 2256 98 0 0 chr17 42346010 42346306 -47158247 + AluSx SINE Alu 3 298 -14 2294 84 0 16 chr17 42346317 42346627 -47157926 + AluSp SINE Alu 9 313 0 1947 118 38 10 chr17 42347787 42348075 -47156478 - AluSx SINE Alu -16 296 1 227 231 0 10 chr17 42348427 42348531 -47156022 + (TG)n Simple_repeat Simple_repeat 2 104 0 315 0 0 0 chr17 42348629 42348664 -47155889 + (ACTG)n Simple_repeat Simple_repeat 4 38 0 698 239 38 0 chr17 42349114 42349273 -47155280 - MIR SINE MIR -10 252 88 1353 186 28 4 chr17 42400484 42400737 -47103816 - AluSx SINE Alu -23 289 31 8228 127 106 57 chr17 42400740 42402350 -47102203 - pTR5 LTR ERV1 0 2438 750 263 98 122 0 chr17 42402350 42402391 -47102162 - AluSx SINE Alu -257 46 1 834 107 25 0 chr17 42402564 42402686 -47101867 + BC200 scRNA scRNA 5 129 -71 2805 168 17 8 chr17 42402730 42403212 -47101341 + MER66B LTR ERV1 1 486 0 222 189 0 0 chr17 42403298 42403335 -47101218 + polypurine Low_complexity Low_complexity 3 39 0 2207 115 3 0 chr17 42403499 42403795 -47100758 - AluSx SINE Alu -15 297 1 400 103 294 0 chr17 42403852 42403920 -47100633 - 5S rRNA rRNA -32 89 2 1778 184 48 143 chr17 42403920 42404158 -47100395 - L1ME2 LINE L1 -71 6093 5834 689 48 0 0 chr17 42404158 42404242 -47100311 + AluY SINE Alu 2 85 -226 1778 184 48 143 chr17 42404242 42404529 -47100024 - L1ME2 LINE L1 -330 5834 5543 3451 47 40 5 chr17 42404584 42405013 -47099540 - MLT2A1 LTR ERVL 0 444 1 1642 162 47 87 chr17 42405094 42405563 -47098990 + LTR7 LTR ERV1 1 450 0 482 204 15 45 chr17 42406467 42406599 -47097954 + MLT1J2 LTR MaLR 36 163 -287 231 125 0 0 chr17 42406606 42406646 -47097907 + (GA)n Simple_repeat Simple_repeat 1 40 0 2261 84 40 0 chr17 42406709 42407006 -47097547 - AluSx SINE Alu -3 309 1 2131 98 24 3 chr17 42407007 42407294 -47097259 - AluSx SINE Alu -19 293 1 381 158 105 0 chr17 42407304 42407380 -47097173 + MLT1J LTR MaLR 416 499 -12 2510 57 0 10 chr17 42407380 42407680 -47096873 - AluY SINE Alu -14 297 1 398 323 62 52 chr17 42408210 42408379 -47096174 - L2 LINE L2 0 3313 3147 2121 104 11 0 chr17 42408379 42408658 -47095895 + AluSx SINE Alu 1 282 -30 459 0 0 0 chr17 42408664 42408715 -47095838 + (TG)n Simple_repeat Simple_repeat 2 52 0 398 323 62 52 chr17 42408715 42408826 -47095727 - L2 LINE L2 -170 3143 3023 23 33 0 0 chr17 42408905 42408935 -47095618 + AT_rich Low_complexity Low_complexity 1 30 0 506 195 0 0 chr17 42408938 42409025 -47095528 + AluJ/FLAM SINE Alu 2 88 -224 2036 123 0 40 chr17 42409134 42409459 -47095094 - AluSx SINE Alu 0 312 1 842 189 0 20 chr17 42409641 42409794 -47094759 + AluJb SINE Alu 141 290 -22 2184 103 14 0 chr17 42410118 42410408 -47094145 - AluSg SINE Alu -16 294 1 927 184 75 5 chr17 42410503 42410704 -47093849 - L1MC4a LINE L1 -374 7434 7220 2412 100 0 0 chr17 42410901 42411210 -47093343 - AluSg SINE Alu 0 310 2 1009 113 0 0 chr17 42411220 42411353 -47093200 - AluSq/x SINE Alu -180 133 1 2277 102 0 3 chr17 42411358 42411662 -47092891 - AluSg SINE Alu -7 303 1 2278 100 6 13 chr17 42411704 42412015 -47092538 - AluY SINE Alu -2 309 1 2217 107 7 0 chr17 42412608 42412899 -47091654 + AluSx SINE Alu 1 293 -19 973 176 0 0 chr17 42413235 42413383 -47091170 - AluJb SINE Alu -25 287 140 2115 138 0 7 chr17 42413390 42413686 -47090867 - AluSx SINE Alu -16 296 3 697 160 127 83 chr17 42413820 42413924 -47090629 - MER5A DNA MER1_type 0 189 72 2157 123 13 3 chr17 42413924 42414232 -47090321 - AluSq SINE Alu -2 311 1 697 160 127 83 chr17 42414232 42414308 -47090245 - MER5A DNA MER1_type -117 72 1 408 198 52 10 chr17 42414328 42414424 -47090129 + MER5A DNA MER1_type 10 109 -80 2352 97 0 0 chr17 42414555 42414854 -47089699 + AluSg SINE Alu 1 299 -11 391 210 198 32 chr17 42414882 42415039 -47089514 - L1MD2 LINE L1 -55 6304 6122 850 194 52 0 chr17 42415068 42415223 -47089330 - AluSg/x SINE Alu -13 299 137 311 288 137 7 chr17 42415301 42415447 -47089106 - L1M4 LINE L1 -1067 5079 4915 2349 90 0 3 chr17 42417444 42417734 -47086819 - AluSx SINE Alu -23 289 1 2243 107 10 7 chr17 42417869 42418169 -47086384 - AluSx SINE Alu -11 301 1 935 165 12 18 chr17 42418310 42418480 -47086073 - AluJo SINE Alu -24 288 120 666 78 68 10 chr17 42418480 42418583 -47085970 - HY1 scRNA scRNA -3 109 1 213 245 151 0 chr17 42419053 42419106 -47085447 + L2 LINE L2 3172 3232 -40 1287 131 135 80 chr17 42420169 42420284 -47084269 + AluJo SINE Alu 1 108 -204 2022 142 3 19 chr17 42420284 42420595 -47083958 + AluJb SINE Alu 1 306 -6 1287 131 135 80 chr17 42420595 42420753 -47083800 + AluJo SINE Alu 108 289 -23 1226 195 22 8 chr17 42420763 42421030 -47083523 + L1MB8 LINE L1 4783 5053 -1093 1938 106 0 36 chr17 42421057 42421331 -47083222 + AluSx SINE Alu 40 303 -9 552 201 93 23 chr17 42421331 42421546 -47083007 + L1MB8 LINE L1 5823 6064 -120 521 146 0 0 chr17 42421579 42421661 -47082892 - AluSg/x SINE Alu -15 294 213 182 275 0 0 chr17 42422067 42422107 -47082446 + MIR SINE MIR 36 75 -133 1529 166 64 30 chr17 42422305 42422601 -47081952 - AluJo SINE Alu -6 306 1 2349 113 0 0 chr17 42422694 42422996 -47081557 - AluSx SINE Alu -6 306 5 2390 94 3 0 chr17 42423193 42423492 -47081061 - AluSp SINE Alu -13 300 1 2120 119 34 0 chr17 42423525 42423818 -47080735 - AluSx SINE Alu -9 303 1 604 136 212 38 chr17 42424767 42424899 -47079654 - AluJb SINE Alu -20 292 138 1449 245 266 21 chr17 42426621 42426851 -47077702 - L2 LINE L2 -4 3309 3137 2221 120 3 0 chr17 42426851 42427160 -47077393 + AluSq SINE Alu 2 311 -2 1449 245 266 21 chr17 42427160 42428025 -47076528 - L2 LINE L2 -176 3137 1923 498 159 168 9 chr17 42428122 42428229 -47076324 - MER20 DNA MER1_type 0 219 96 236 227 0 0 chr17 42428876 42428920 -47075633 + L2 LINE L2 3265 3308 -5 239 318 84 19 chr17 42429170 42429324 -47075229 - L1MC/D LINE L1 -1909 5899 5736 2008 123 3 23 chr17 42430407 42430579 -47073974 - AluSq SINE Alu -9 304 130 2105 109 37 3 chr17 42430579 42430873 -47073680 - AluSp SINE Alu -9 304 1 2304 82 0 47 chr17 42430873 42431192 -47073361 - AluY SINE Alu -7 304 1 2225 108 0 0 chr17 42431192 42431489 -47073064 - AluY SINE Alu -14 297 1 2008 123 3 23 chr17 42431489 42431624 -47072929 - AluSq SINE Alu -180 133 1 2283 104 0 19 chr17 42432405 42432721 -47071832 + AluSq SINE Alu 1 310 -3 21 36 0 0 chr17 42433549 42433577 -47070976 + AT_rich Low_complexity Low_complexity 1 28 0 260 277 12 24 chr17 42434249 42434332 -47070221 - L2 LINE L2 -1 3271 3190 2439 91 3 0 chr17 42434336 42434643 -47069910 + AluSq SINE Alu 1 308 -5 926 148 16 33 chr17 42434646 42434828 -47069725 + AluSq SINE Alu 135 313 0 1982 128 0 65 chr17 42434899 42435220 -47069333 + AluSx SINE Alu 1 300 -12 2178 125 0 26 chr17 42435220 42435531 -47069022 + AluSx SINE Alu 1 303 -9 1540 149 22 22 chr17 42437375 42437644 -47066909 + AluJb SINE Alu 44 312 0 2109 104 4 4 chr17 42437786 42438093 -47066460 + AluSg SINE Alu 1 307 0 352 250 0 75 chr17 42438792 42438912 -47065641 - L1M4 LINE L1 -350 5771 5662 2311 118 0 0 chr17 42439102 42439407 -47065146 + AluSx SINE Alu 1 305 -7 1162 139 0 0 chr17 42439407 42439557 -47064996 + AluSg/x SINE Alu 135 307 -3 23 0 0 0 chr17 42439557 42439580 -47064973 + AT_rich Low_complexity Low_complexity 1 23 0 2458 90 0 0 chr17 42439810 42440121 -47064432 + AluY SINE Alu 1 311 0 2144 137 0 0 chr17 42440138 42440446 -47064107 + AluJb SINE Alu 1 306 -6 1674 118 26 138 chr17 42440531 42440660 -47063893 + AluSx SINE Alu 1 143 -159 1741 156 7 17 chr17 42440660 42440961 -47063592 + AluSx SINE Alu 1 298 -14 1674 118 26 138 chr17 42440961 42441171 -47063382 + AluSx SINE Alu 143 302 0 2392 71 0 0 chr17 42441603 42441899 -47062654 - AluY SINE Alu -15 296 1 411 358 34 6 chr17 42442159 42442225 -47062328 + L1MC4 LINE L1 7836 7899 -143 469 173 146 18 chr17 42442225 42442335 -47062218 + FLAM_C SINE Alu 1 124 -9 411 358 34 6 chr17 42442335 42442444 -47062109 + L1MC4 LINE L1 7899 8016 -26 209 132 26 0 chr17 42442871 42442909 -47061644 + T-rich Low_complexity Low_complexity 4 42 0 1486 159 21 31 chr17 42445027 42445355 -47059198 + AluJo SINE Alu 1 325 0 2222 109 0 6 chr17 42445672 42445983 -47058570 - AluSx SINE Alu -2 310 2 323 309 143 0 chr17 42446140 42446308 -47058245 + MIR SINE MIR 44 235 -27 2125 107 3 19 chr17 42447044 42447361 -47057192 + AluSx SINE Alu 1 312 0 2719 22 3 0 chr17 42447701 42448016 -47056537 + AluYb8 SINE Alu 1 316 -2 220 384 0 0 chr17 42448207 42448280 -47056273 + MIR SINE MIR 42 114 -148 1550 155 155 20 chr17 42448281 42448687 -47055866 - LTR54B LTR ERV1 -24 474 14 1840 128 35 0 chr17 42448687 42448969 -47055584 - AluSx SINE Alu -20 292 1 2273 74 7 3 chr17 42448981 42449278 -47055275 - AluSg SINE Alu -12 298 1 191 271 0 0 chr17 42449393 42449441 -47055112 + MIR SINE MIR 205 252 -10 233 53 53 0 chr17 42449950 42449988 -47054565 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 367 299 78 65 chr17 42450171 42450317 -47054236 + L1MC4 LINE L1 5584 5727 -404 2301 99 0 3 chr17 42450317 42450630 -47053923 - AluSx SINE Alu 0 312 1 367 299 78 65 chr17 42450630 42450971 -47053582 + L1MC4 LINE L1 5727 5974 -157 1828 137 13 29 chr17 42450998 42451305 -47053248 - AluJo SINE Alu -10 302 1 314 298 12 0 chr17 42451556 42451640 -47052913 + MIR SINE MIR 62 146 -62 2360 68 0 46 chr17 42451709 42452035 -47052518 + AluY SINE Alu 1 311 0 181 294 0 0 chr17 42453369 42453420 -47051133 + L2 LINE L2 2992 3042 -230 540 178 9 19 chr17 42453426 42453533 -47051020 - FLAM_A SINE Alu -11 131 26 1776 190 125 3 chr17 42454069 42454422 -47050131 + MSTD LTR MaLR 1 396 0 3001 64 12 111 chr17 42455166 42455669 -47048884 - MLT2A2 LTR ERVL 0 453 1 206 266 43 32 chr17 42456054 42456148 -47048405 + GA-rich Low_complexity Low_complexity 3 97 0 1944 159 0 0 chr17 42456161 42456470 -47048083 - AluY SINE Alu -2 309 1 330 236 49 35 chr17 42457282 42457426 -47047127 + (CCCA)n Simple_repeat Simple_repeat 2 147 0 305 175 125 25 chr17 42457877 42457957 -47046596 - MIR3 SINE MIR -14 194 107 205 319 0 44 chr17 42458776 42458867 -47045686 + CT-rich Low_complexity Low_complexity 6 92 0 468 210 86 43 chr17 42458985 42459147 -47045406 - MIR SINE MIR -70 192 24 708 283 60 4 chr17 42459994 42460227 -47044326 - MIR SINE MIR -1 261 16 559 260 183 24 chr17 42460250 42460458 -47044095 - MIR SINE MIR -2 260 20 377 264 210 26 chr17 42460503 42460675 -47043878 - L1ME3A LINE L1 -6 6156 6017 1791 189 53 55 chr17 42460675 42460882 -47043671 - MSTD LTR MaLR 0 396 190 2257 104 0 0 chr17 42460882 42461180 -47043373 - AluSx SINE Alu -13 299 2 1848 145 3 14 chr17 42461184 42461480 -47043073 - AluJb SINE Alu -5 307 15 1791 189 53 55 chr17 42461480 42461664 -47042889 - MSTD LTR MaLR -209 187 1 377 264 210 26 chr17 42461664 42461718 -47042835 - L1ME3A LINE L1 -145 6017 5892 647 222 266 13 chr17 42461741 42462064 -47042489 - L1ME3A LINE L1 -398 5772 5405 199 344 0 0 chr17 42463030 42463091 -47041462 + MIR SINE MIR 58 118 -90 402 301 83 0 chr17 42463268 42463401 -47041152 - MIR3 SINE MIR -3 205 62 956 235 54 0 chr17 42463939 42464160 -47040393 + MIR SINE MIR 2 234 -28 2211 91 0 3 chr17 42464179 42464477 -47040076 - AluSp SINE Alu -16 297 1 933 181 12 0 chr17 42464495 42464661 -47039892 - AluJo/FRAM SINE Alu -11 301 134 1918 149 3 13 chr17 42464661 42464969 -47039584 - AluJb SINE Alu -7 305 1 421 289 16 16 chr17 42465210 42465331 -47039222 - MIR SINE MIR -63 145 25 482 288 50 7 chr17 42466026 42466165 -47038388 + L2 LINE L2 3125 3269 -3 190 222 214 68 chr17 42466473 42466590 -47037963 - MIR SINE MIR -69 193 60 2144 118 0 0 chr17 42466628 42466934 -47037619 - AluY SINE Alu -5 306 1 492 241 40 101 chr17 42467575 42467638 -47036915 - MER91B DNA MER1_type 0 190 125 2273 102 0 3 chr17 42467638 42467942 -47036611 - AluSx SINE Alu -9 303 1 2508 61 0 0 chr17 42467943 42468254 -47036299 - AluY SINE Alu 0 311 1 1836 156 0 3 chr17 42468254 42468549 -47036004 - AluJo SINE Alu -10 302 9 492 241 40 101 chr17 42468549 42468681 -47035872 - MER91B DNA MER1_type -63 127 4 189 0 0 0 chr17 42469263 42469284 -47035269 + (CGG)n Simple_repeat Simple_repeat 3 23 0 209 180 0 49 chr17 42469297 42469358 -47035195 + C-rich Low_complexity Low_complexity 3 60 0 32 67 0 0 chr17 42469631 42469691 -47034862 + GC_rich Low_complexity Low_complexity 1 60 0 252 59 0 0 chr17 42470820 42470854 -47033699 + (GA)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr17 42470855 42470898 -47033655 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 498 17 0 0 chr17 42470897 42470956 -47033597 + (GA)n Simple_repeat Simple_repeat 2 60 0 436 201 10 88 chr17 42471166 42471360 -47033193 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 1210 164 153 19 chr17 42472033 42472301 -47032252 + AluJo SINE Alu 1 304 -8 2274 116 0 0 chr17 42472304 42472615 -47031938 + AluSx SINE Alu 1 311 -1 274 254 0 0 chr17 42473689 42473748 -47030805 + MIR SINE MIR 116 174 -88 859 141 0 0 chr17 42475310 42475437 -47029116 + FLAM_C SINE Alu 7 136 -176 2417 80 0 3 chr17 42475437 42475749 -47028804 + AluY SINE Alu 1 311 0 1717 146 31 14 chr17 42475983 42476270 -47028283 - AluJb SINE Alu -20 292 1 1728 136 45 7 chr17 42476494 42476781 -47027772 - AluJo SINE Alu 0 312 15 1914 134 0 36 chr17 42477779 42478104 -47026449 - AluJo SINE Alu 0 312 5 305 241 6 86 chr17 42480189 42480313 -47024240 - MIR SINE MIR -57 151 36 876 126 155 5 chr17 42481079 42481286 -47023267 - L1MC2 LINE L1 -5 6339 6102 852 196 36 0 chr17 42481288 42481456 -47023097 - AluJb SINE Alu -5 307 134 2131 80 3 3 chr17 42481456 42481742 -47022811 - AluSq SINE Alu -16 297 12 213 196 0 0 chr17 42482682 42482728 -47021825 + (TG)n Simple_repeat Simple_repeat 1 46 0 181 173 0 135 chr17 42482879 42482931 -47021622 - L2 LINE L2 -1 3271 3227 306 180 65 0 chr17 42485137 42485276 -47019277 + (TG)n Simple_repeat Simple_repeat 1 148 0 410 243 68 40 chr17 42487372 42487549 -47017004 + MIR SINE MIR 33 214 -48 188 195 24 0 chr17 42487574 42487615 -47016938 + MIR SINE MIR 103 144 -64 2234 102 0 0 chr17 42489489 42489793 -47014760 + AluSg SINE Alu 1 304 -6 282 116 0 0 chr17 42490111 42490154 -47014399 + (TG)n Simple_repeat Simple_repeat 1 43 0 209 290 37 65 chr17 42490265 42490372 -47014181 - MIR SINE MIR -73 135 32 683 250 223 12 chr17 42490716 42491044 -47013509 + L2 LINE L2 2917 3313 0 2092 58 83 0 chr17 42491259 42491535 -47013018 + L1PA8 LINE L1 5861 6159 -13 931 165 0 6 chr17 42491545 42491703 -47012850 + AluSg/x SINE Alu 148 304 -8 21 0 0 0 chr17 42492029 42492050 -47012503 + AT_rich Low_complexity Low_complexity 1 21 0 1253 159 83 89 chr17 42492310 42492612 -47011941 - AluJb SINE Alu 0 302 3 654 313 65 13 chr17 42492637 42492867 -47011686 + L3 LINE CR1 1336 1577 0 1823 147 23 7 chr17 42492978 42493284 -47011269 - AluJb SINE Alu -1 311 1 183 42 0 0 chr17 42493406 42493430 -47011123 + (TCTCCC)n Simple_repeat Simple_repeat 1 24 0 2140 121 0 0 chr17 42493436 42493743 -47010810 - AluSx SINE Alu -5 307 1 378 307 136 44 chr17 42494192 42494479 -47010074 + L2 LINE L2 2348 2607 -665 2114 113 10 0 chr17 42494479 42494772 -47009781 - AluSx SINE Alu -16 296 1 378 307 136 44 chr17 42494772 42495145 -47009408 + L2 LINE L2 2607 3078 -194 2360 87 0 0 chr17 42495254 42495565 -47008988 - AluY SINE Alu 0 311 1 2258 80 0 0 chr17 42495565 42495853 -47008700 - AluSg SINE Alu -14 296 9 397 186 0 12 chr17 42495925 42496011 -47008542 + MER53 DNA DNA 12 96 -93 1928 140 7 16 chr17 42496180 42496487 -47008066 - AluSx SINE Alu -8 304 1 320 300 50 33 chr17 42496541 42496661 -47007892 - HAL1 LINE L1 -1234 1273 1152 1975 125 30 0 chr17 42496665 42496968 -47007585 - AluSx SINE Alu 0 312 1 180 152 0 0 chr17 42497464 42497497 -47007056 + (CAT)n Simple_repeat Simple_repeat 3 35 0 638 227 62 6 chr17 42497504 42497680 -47006873 + MIR SINE MIR 34 219 -43 470 229 48 0 chr17 42497675 42497780 -47006773 - L2 LINE L2 -16 3256 3147 * 382 244 163 68 chr17 42497840 42498046 -47006507 - MIR SINE MIR -4 258 33 1981 134 23 0 chr17 42498053 42498352 -47006201 - AluSx SINE Alu -6 306 1 189 0 0 0 chr17 42498381 42498402 -47006151 + (TG)n Simple_repeat Simple_repeat 1 21 0 470 35 0 0 chr17 42498503 42498560 -47005993 - AluJ/FLAM SINE Alu -254 58 2 351 286 71 0 chr17 42498602 42498742 -47005811 - MARNA DNA Mariner -336 250 101 362 296 61 74 chr17 42498974 42499204 -47005349 - L2 LINE L2 -1 3271 3045 2027 136 0 3 chr17 42499267 42499577 -47004976 - AluSx SINE Alu -3 309 1 2214 91 0 0 chr17 42503940 42504237 -47000316 + AluSg SINE Alu 1 297 -13 216 0 0 0 chr17 42504245 42504269 -47000284 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1327 126 0 0 chr17 42504947 42505138 -46999415 - AluSg SINE Alu -119 191 1 1728 143 35 11 chr17 42505139 42505426 -46999127 - AluSx SINE Alu -18 294 1 1825 172 0 0 chr17 42505426 42505727 -46998826 - AluJo SINE Alu -10 302 1 2230 107 0 0 chr17 42507198 42507506 -46997047 + AluSx SINE Alu 1 308 -4 1703 160 20 10 chr17 42507517 42507810 -46996743 + AluJb SINE Alu 1 296 -16 1939 114 16 16 chr17 42507859 42508166 -46996387 - AluSx SINE Alu -5 307 1 2022 101 11 0 chr17 42508172 42508478 -46996075 - AluY SINE Alu 0 309 1 2168 97 0 16 chr17 42508478 42508788 -46995765 - AluSc SINE Alu -3 306 1 303 244 170 7 chr17 42508832 42508967 -46995586 - MIR SINE MIR -8 254 98 235 254 0 0 chr17 42510280 42510339 -46994214 + MIR SINE MIR 81 139 -123 1170 113 6 0 chr17 42510349 42510517 -46994036 + AluSg/x SINE Alu 135 303 -9 1978 132 0 26 chr17 42510521 42510832 -46993721 + AluJb SINE Alu 5 307 -5 199 294 91 70 chr17 42511295 42511438 -46993115 + L2 LINE L2 2914 3059 -213 964 327 82 16 chr17 42511854 42512353 -46992200 + L2 LINE L2 2435 2966 -348 442 242 78 43 chr17 42512726 42512781 -46991772 + L1M4 LINE L1 3730 3782 -2364 750 211 0 0 chr17 42512781 42512909 -46991644 + FLAM_A SINE Alu 2 129 -4 442 242 78 43 chr17 42512909 42513064 -46991489 + L1M4 LINE L1 3782 3950 -2196 2302 85 0 3 chr17 42514763 42515068 -46989485 - AluSx SINE Alu -8 304 1 474 251 127 6 chr17 42515531 42515695 -46988858 + MIR SINE MIR 61 249 -13 300 247 0 39 chr17 42515783 42515860 -46988693 - MIR SINE MIR -65 197 124 2326 106 0 0 chr17 42515864 42516175 -46988378 + AluSx SINE Alu 1 311 -1 2428 160 56 0 chr17 42516175 42516637 -46987916 + L1MB7 LINE L1 5433 5920 -264 21 0 0 0 chr17 42519160 42519181 -46985372 + GC_rich Low_complexity Low_complexity 1 21 0 318 263 0 0 chr17 42520313 42520387 -46984166 + MIR SINE MIR 79 146 -62 241 306 121 25 chr17 42520953 42521084 -46983469 - MIR3 SINE MIR -50 158 16 498 280 57 6 chr17 42522590 42522747 -46981806 - MIR SINE MIR -50 212 48 692 164 0 49 chr17 42522747 42522869 -46981684 + FLAM_C SINE Alu 2 117 -26 342 261 43 11 chr17 42522871 42522963 -46981590 + L1MCa LINE L1 1970 2064 -4362 * 369 326 0 0 chr17 42522905 42522994 -46981559 - L1MC4 LINE L1 -1340 6702 6614 200 279 23 23 chr17 42523873 42523959 -46980594 + C-rich Low_complexity Low_complexity 3 88 0 390 237 54 0 chr17 42524513 42524606 -46979947 + MER91C DNA MER1_type 9 106 -34 435 256 160 0 chr17 42525227 42525352 -46979201 + MIR3 SINE MIR 43 187 -21 268 311 62 26 chr17 42527343 42527475 -46977078 - MIR SINE MIR -67 141 3 244 318 0 45 chr17 42531733 42531821 -46972732 - L2 LINE L2 -1 3312 3229 2119 77 18 3 chr17 42531898 42532184 -46972369 + AluY SINE Alu 1 290 -21 489 54 81 0 chr17 42532184 42532295 -46972258 + (TA)n Simple_repeat Simple_repeat 1 120 0 1534 175 3 42 chr17 42532347 42532656 -46971897 - AluJo SINE Alu -15 297 1 1977 148 0 3 chr17 42532772 42533070 -46971483 - AluSx SINE Alu -14 298 2 2048 96 31 0 chr17 42533071 42533362 -46971191 - AluSx SINE Alu -12 300 1 1969 138 3 3 chr17 42535440 42535752 -46968801 + AluSx SINE Alu 1 312 0 982 154 26 0 chr17 42537594 42537750 -46966803 - AluJb SINE Alu -21 291 132 2153 114 3 3 chr17 42537832 42538139 -46966414 + AluSq SINE Alu 1 307 -6 860 142 0 8 chr17 42538346 42538480 -46966073 - AluJb SINE Alu -179 133 1 1100 51 76 0 chr17 42538542 42538699 -46965854 + L1PA12 LINE L1 5868 6036 -132 257 163 0 0 chr17 42538699 42538742 -46965811 + AluJ/FLAM SINE Alu 60 102 -200 2215 131 0 0 chr17 42540065 42540377 -46964176 - AluSx SINE Alu 0 312 1 2322 64 3 7 chr17 42540391 42540686 -46963867 - AluY SINE Alu -17 294 1 2104 104 3 17 chr17 42540686 42540985 -46963568 - AluSx SINE Alu -17 295 1 1726 161 43 0 chr17 42541005 42541285 -46963268 + AluJb SINE Alu 1 292 -20 2266 70 0 13 chr17 42541287 42541572 -46962981 + AluY SINE Alu 1 283 -28 253 0 0 0 chr17 42541572 42541600 -46962953 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 2266 70 0 13 chr17 42541600 42541614 -46962939 + AluY SINE Alu 283 296 -15 1026 173 103 0 chr17 42542469 42542683 -46961870 + Tigger7 DNA MER2_type 32 267 -2220 633 124 0 0 chr17 42542681 42542778 -46961775 + Tigger7 DNA MER2_type 2391 2487 0 * 930 131 57 6 chr17 42542835 42543010 -46961543 - MER20 DNA MER1_type 0 219 36 602 100 0 0 chr17 42543309 42543389 -46961164 + AluS SINE Alu 1 80 -232 657 246 163 9 chr17 42543596 42543811 -46960742 - MIR SINE MIR 0 262 15 2334 53 0 20 chr17 42543844 42543981 -46960572 + AluSq SINE Alu 1 139 -174 2248 36 72 0 chr17 42543981 42544258 -46960295 + AluY SINE Alu 1 297 -14 2334 53 0 20 chr17 42544258 42544423 -46960130 + AluSq SINE Alu 139 297 -16 200 233 0 83 chr17 42545472 42545532 -46959021 - MIR SINE MIR -114 94 40 836 261 51 17 chr17 42546048 42546282 -46958271 - MIR SINE MIR -16 246 5 1996 128 14 0 chr17 42546423 42546719 -46957834 - AluSg SINE Alu -10 300 1 486 256 119 0 chr17 42546936 42547126 -46957427 - MIR SINE MIR -24 238 22 4486 129 44 8 chr17 42549101 42549827 -46954726 - L1MB7 LINE L1 0 6184 5433 1863 104 32 75 chr17 42549828 42550001 -46954552 - AluSx SINE Alu -17 295 139 2099 100 0 42 chr17 42550001 42550310 -46954243 - AluSx SINE Alu -16 296 1 1863 104 32 75 chr17 42550310 42550444 -46954109 - AluSx SINE Alu -173 139 1 208 188 0 21 chr17 42550502 42550550 -46954003 + (TA)n Simple_repeat Simple_repeat 2 48 0 200 188 12 62 chr17 42561336 42561416 -46943137 + (TCTG)n Simple_repeat Simple_repeat 4 79 0 205 176 0 0 chr17 42562354 42562388 -46942165 + (TG)n Simple_repeat Simple_repeat 1 34 0 241 180 0 33 chr17 42563126 42563187 -46941366 + C-rich Low_complexity Low_complexity 2 60 0 180 0 0 0 chr17 42563298 42563318 -46941235 + (TCTCCC)n Simple_repeat Simple_repeat 6 25 0 203 256 0 37 chr17 42563380 42563462 -46941091 + C-rich Low_complexity Low_complexity 3 81 0 211 278 0 0 chr17 42564890 42564944 -46939609 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 819 150 0 36 chr17 42564964 42565104 -46939449 + AluJo SINE Alu 1 135 -177 1910 76 4 27 chr17 42565614 42565876 -46938677 - AluSq SINE Alu -6 307 52 210 191 0 24 chr17 42566020 42566062 -46938491 - L2 LINE L2 -3 3269 3229 1197 174 40 0 chr17 42566160 42566361 -46938192 - MER3 DNA MER1_type 0 209 1 440 324 160 0 chr17 42566874 42567087 -46937466 + MIR SINE MIR 16 262 0 262 300 54 31 chr17 42567779 42567909 -46936644 + MIR SINE MIR 52 184 -78 192 310 43 52 chr17 42567890 42568006 -46936547 - MIR SINE MIR -146 116 2 * 25 75 0 0 chr17 42568965 42569018 -46935535 + AT_rich Low_complexity Low_complexity 1 53 0 189 195 0 0 chr17 42569543 42569584 -46934969 + (CA)n Simple_repeat Simple_repeat 1 41 0 2341 96 0 6 chr17 42570312 42570777 -46933776 + AluSx SINE Alu 1 463 0 336 248 91 0 chr17 42570969 42571090 -46933463 - MER20B DNA MER1_type -44 739 608 207 0 0 0 chr17 42571322 42571345 -46933208 + (A)n Simple_repeat Simple_repeat 1 23 0 2192 102 23 3 chr17 42571348 42571651 -46932902 + AluSx SINE Alu 1 309 -3 284 113 25 9 chr17 42571747 42571950 -46932603 + AluSq SINE Alu 12 302 0 998 108 0 0 chr17 42572372 42572501 -46932052 + AluSg SINE Alu 2 130 -180 2309 103 0 3 chr17 42572504 42572816 -46931737 + AluY SINE Alu 1 311 0 214 179 26 0 chr17 42572816 42572855 -46931698 + GA-rich Low_complexity Low_complexity 4 43 0 312 311 30 30 chr17 42572857 42572989 -46931564 + L1 LINE L1 3073 3204 -2942 336 248 91 0 chr17 42573159 42573280 -46931273 - MER20B DNA MER1_type -44 739 608 2297 79 3 19 chr17 42573477 42573793 -46930760 - AluY SINE Alu 0 311 1 517 232 169 24 chr17 42573795 42573888 -46930665 - MER20B DNA MER1_type -491 292 214 1797 159 0 22 chr17 42573888 42574202 -46930351 + AluJb SINE Alu 1 307 -5 517 232 169 24 chr17 42574202 42574362 -46930191 - MER20B DNA MER1_type -569 214 2 919 209 51 33 chr17 42574407 42574622 -46929931 - MER20B DNA MER1_type 0 219 1 184 326 0 34 chr17 42574739 42574828 -46929725 - L2 LINE L2 -165 3107 3022 988 206 5 5 chr17 42574938 42575161 -46929392 + Charlie5 DNA MER1_type 2363 2585 -27 252 259 0 0 chr17 42575163 42575221 -46929332 + L2 LINE L2 3256 3313 0 182 333 87 14 chr17 42575210 42575348 -46929205 - L2 LINE L2 -1002 2312 2165 * 221 154 0 0 chr17 42575370 42575409 -46929144 - L2 LINE L2 -6 3307 3269 180 238 36 83 chr17 42575585 42575669 -46928884 - L2 LINE L2 -335 2978 2899 24 53 0 0 chr17 42577440 42577478 -46927075 + GC_rich Low_complexity Low_complexity 1 38 0 195 100 0 0 chr17 42577488 42577518 -46927035 + (CGG)n Simple_repeat Simple_repeat 1 30 0 24 53 0 0 chr17 42577830 42577868 -46926685 + GC_rich Low_complexity Low_complexity 1 38 0 200 358 0 0 chr17 42578554 42578621 -46925932 - MIR3 SINE MIR -28 180 114 329 325 73 0 chr17 42579485 42579608 -46924945 + MIR3 SINE MIR 54 185 -23 585 184 10 0 chr17 42579611 42579709 -46924844 - FLAM_A SINE Alu -18 124 26 207 0 0 0 chr17 42579773 42579796 -46924757 + (A)n Simple_repeat Simple_repeat 1 23 0 2269 105 0 6 chr17 42579912 42580225 -46924328 - AluSx SINE Alu -1 311 1 2209 85 3 0 chr17 42580232 42580547 -46924006 - AluSp SINE Alu 0 316 1 407 292 118 45 chr17 42580820 42580998 -46923555 - MIR SINE MIR -54 208 18 2445 50 3 3 chr17 42581925 42582224 -46922329 + AluY SINE Alu 1 299 -12 24 0 0 0 chr17 42583060 42583084 -46921469 + AT_rich Low_complexity Low_complexity 1 24 0 2020 99 46 3 chr17 42583088 42583370 -46921183 + AluSx SINE Alu 1 294 -18 1328 205 29 103 chr17 42583866 42584026 -46920527 + MLT1B LTR MaLR 1 171 -219 631 133 125 25 chr17 42584026 42584146 -46920407 - FLAM_C SINE Alu 0 133 2 1328 205 29 103 chr17 42584146 42584404 -46920149 + MLT1B LTR MaLR 171 388 -2 2633 167 38 13 chr17 42584689 42585163 -46919390 - MER66B LTR ERV1 0 486 1 371 222 71 40 chr17 42585480 42585606 -46918947 + MIR SINE MIR 46 175 -87 226 326 22 0 chr17 42585646 42585735 -46918818 + L2 LINE L2 2969 3059 -213 1430 140 9 0 chr17 42586151 42586379 -46918174 - AluSg/x SINE Alu -7 303 74 217 253 22 38 chr17 42586547 42586669 -46917884 + GA-rich Low_complexity Low_complexity 1 120 0 188 342 25 51 chr17 42587097 42587176 -46917377 - L3b LINE CR1 -87 1496 1420 2078 138 0 10 chr17 42587356 42587668 -46916885 - AluJo SINE Alu -3 309 1 197 33 33 0 chr17 42588518 42588548 -46916005 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 540 0 0 0 chr17 42588661 42588721 -46915832 + (TG)n Simple_repeat Simple_repeat 2 61 0 2060 117 13 0 chr17 42588874 42589173 -46915380 + AluSx SINE Alu 1 303 -9 186 250 36 18 chr17 42589567 42589623 -46914930 - MER5A DNA MER1_type 0 189 133 196 291 12 70 chr17 42589641 42589727 -46914826 - MIR3 SINE MIR -43 165 85 211 225 0 0 chr17 42590274 42590314 -46914239 + L2 LINE L2 3180 3219 -94 198 0 0 0 chr17 42591431 42591453 -46913100 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2442 70 3 0 chr17 42591453 42591738 -46912815 - AluSx SINE Alu -26 286 1 199 315 24 55 chr17 42591791 42591918 -46912635 - MIR3 SINE MIR -85 123 1 225 94 0 0 chr17 42592895 42592927 -46911626 + (CGTG)n Simple_repeat Simple_repeat 4 35 0 2316 103 0 28 chr17 42593637 42593957 -46910596 - AluSx SINE Alu -1 311 1 300 247 0 39 chr17 42593961 42594038 -46910515 + MIR SINE MIR 124 197 -65 465 251 127 6 chr17 42594126 42594290 -46910263 - MIR SINE MIR -13 249 61 2132 104 38 3 chr17 42594753 42594877 -46909676 + AluSx SINE Alu 1 119 -193 339 44 0 0 chr17 42594877 42594922 -46909631 + (CA)n Simple_repeat Simple_repeat 2 46 0 2132 104 38 3 chr17 42594922 42595086 -46909467 + AluSx SINE Alu 119 299 -13 1597 163 29 0 chr17 42595245 42595491 -46909062 - AluJb SINE Alu -16 296 44 1854 149 30 10 chr17 42595496 42595791 -46908762 - AluJb SINE Alu -10 302 2 267 299 201 0 chr17 42596180 42596314 -46908239 + L2 LINE L2 3100 3260 -12 189 264 0 0 chr17 42596668 42596721 -46907832 - MIR SINE MIR -106 102 50 338 274 184 72 chr17 42598919 42599251 -46905302 + L2 LINE L2 2897 3265 -7 336 160 75 43 chr17 42601303 42601397 -46903156 - MIR3 SINE MIR -6 202 106 494 324 36 14 chr17 42601479 42601698 -46902855 + MIR SINE MIR 27 250 -12 2244 83 45 0 chr17 42601817 42602105 -46902448 + AluSq SINE Alu 1 301 -12 371 258 197 38 chr17 42602136 42602268 -46902285 + MER5B DNA MER1_type 1 153 -25 533 274 43 6 chr17 42603009 42603173 -46901380 + MIR SINE MIR 20 189 -73 273 239 120 43 chr17 42603432 42603524 -46901029 - MIR SINE MIR -56 206 108 635 241 15 34 chr17 42603577 42603764 -46900789 - MIR SINE MIR -14 248 64 394 240 32 24 chr17 42604488 42604613 -46899940 + MIR SINE MIR 20 145 -117 1423 153 5 0 chr17 42604667 42604876 -46899677 - AluSg/x SINE Alu -19 291 82 1384 110 46 156 chr17 42604917 42605046 -46899507 + AluJo SINE Alu 1 143 -159 1573 103 0 45 chr17 42605046 42605270 -46899283 + AluSq SINE Alu 1 214 -99 1384 110 46 156 chr17 42605270 42605466 -46899087 + AluJo SINE Alu 143 290 -12 264 286 71 39 chr17 42605729 42605883 -46898670 + L3 LINE CR1 1316 1474 -103 450 304 19 6 chr17 42606474 42606635 -46897918 - MIR SINE MIR 0 262 100 325 259 70 42 chr17 42606686 42606741 -46897812 + MIR SINE MIR 100 152 -110 2364 106 7 0 chr17 42606741 42607043 -46897510 + AluSx SINE Alu 1 304 -8 325 259 70 42 chr17 42607043 42607130 -46897423 + MIR SINE MIR 152 246 -16 1907 189 13 53 chr17 42607317 42607771 -46896782 - MER63B DNA MER1_type 0 436 1 273 268 27 27 chr17 42607954 42608066 -46896487 - MIR SINE MIR -7 255 144 806 177 255 5 chr17 42608903 42609095 -46895458 + MIR SINE MIR 18 257 -5 190 263 0 0 chr17 42609106 42609144 -46895409 - L2 LINE L2 -9 3304 3267 681 248 83 26 chr17 42609159 42609389 -46895164 - MIR SINE MIR 0 262 20 2138 134 3 6 chr17 42609613 42609926 -46894627 + AluSx SINE Alu 1 312 0 360 283 33 7 chr17 42610008 42610160 -46894393 - L2 LINE L2 -455 2859 2704 223 311 168 42 chr17 42610505 42610672 -46893881 + MIR SINE MIR 20 207 -55 500 212 82 130 chr17 42610733 42610851 -46893702 - MIR SINE MIR 0 262 140 1871 145 31 3 chr17 42610851 42611140 -46893413 - AluJb SINE Alu -15 297 1 500 212 82 130 chr17 42611140 42611290 -46893263 - MIR SINE MIR -122 140 7 1982 178 68 32 chr17 42611307 42611750 -46892803 + LTR2B LTR ERV1 32 490 0 224 244 0 73 chr17 42612227 42612309 -46892244 + MIR SINE MIR 82 157 -105 366 273 174 12 chr17 42612316 42612477 -46892076 - MIR SINE MIR -68 194 8 243 283 117 25 chr17 42613197 42613317 -46891236 + MIR SINE MIR 18 148 -60 2274 91 0 3 chr17 42613469 42613756 -46890797 + AluSx SINE Alu 14 299 -13 1628 213 65 25 chr17 42615479 42615606 -46888947 - L1M4 LINE L1 -2228 3918 3798 705 211 0 0 chr17 42615606 42615734 -46888819 - FLAM_A SINE Alu -4 129 2 1628 213 65 25 chr17 42615734 42616052 -46888501 - L1M4 LINE L1 -2348 3798 3455 2524 70 3 0 chr17 42616239 42616541 -46888012 + AluY SINE Alu 1 303 -8 272 324 70 28 chr17 42616584 42616611 -46887942 - L2 LINE L2 0 3272 3248 2166 100 0 28 chr17 42616611 42616934 -46887619 + AluSx SINE Alu 1 315 0 272 324 70 28 chr17 42616934 42617045 -46887508 - L2 LINE L2 -24 3248 3125 934 190 12 71 chr17 42617120 42617255 -46887298 + MER33 DNA MER1_type 26 141 -2444 797 156 0 0 chr17 42617255 42617383 -46887170 - FLAM_C SINE Alu -2 131 4 934 190 12 71 chr17 42617383 42617500 -46887053 + MER33 DNA MER1_type 141 263 -61 724 265 131 8 chr17 42617503 42617763 -46886790 - MLT1C LTR MaLR -2 465 174 1816 179 0 7 chr17 42617770 42618072 -46886481 - AluJo SINE Alu -12 300 1 2006 126 13 23 chr17 42618215 42618517 -46886036 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 42618611 42618710 -46885843 + LTR67 LTR ERVL 432 535 -22 1765 145 25 18 chr17 42619442 42619759 -46884794 + AluJb SINE Alu 1 319 0 279 171 64 107 chr17 42619921 42620007 -46884546 - Charlie7 DNA MER1_type -10 2602 2523 2241 130 0 10 chr17 42620007 42620306 -46884247 + AluSx SINE Alu 1 296 -16 279 171 64 107 chr17 42620306 42620359 -46884194 - Charlie7 DNA MER1_type -89 2523 2469 * 2312 216 55 46 chr17 42620357 42621226 -46883327 - Charlie7 DNA MER1_type -65 2547 1671 565 253 132 105 chr17 42621261 42621566 -46882987 - Charlie7 DNA MER1_type -2174 438 120 2677 55 0 0 chr17 42621566 42621873 -46882680 - AluY SINE Alu 0 311 5 565 253 132 105 chr17 42621873 42621939 -46882614 - Charlie7 DNA MER1_type -2492 120 57 453 161 0 0 chr17 42622878 42622959 -46881594 + MLT1E3 LTR MaLR 544 624 0 * 1044 186 20 67 chr17 42622959 42623209 -46881344 - MER115 DNA AcHobo -57 636 399 327 326 47 8 chr17 42623312 42623441 -46881112 - MER115 DNA AcHobo -466 227 94 565 27 0 0 chr17 42624917 42624991 -46879562 + AluY SINE Alu 231 304 -8 2281 112 0 0 chr17 42625307 42625610 -46878943 + AluSx SINE Alu 2 304 -8 207 0 0 0 chr17 42627231 42627254 -46877299 + (A)n Simple_repeat Simple_repeat 1 23 0 1871 128 83 0 chr17 42628024 42628313 -46876240 + AluSp SINE Alu 1 313 0 1991 164 6 6 chr17 42628356 42628667 -46875886 - AluJo SINE Alu -1 311 1 252 0 0 0 chr17 42629361 42629389 -46875164 + (TG)n Simple_repeat Simple_repeat 2 29 0 223 286 43 14 chr17 42629808 42629878 -46874675 + L3 LINE CR1 1420 1491 -86 193 240 0 20 chr17 42629885 42629935 -46874618 - L2 LINE L2 0 3313 3265 337 0 23 0 chr17 42629966 42630010 -46874543 + AluY SINE Alu 2 46 -255 1464 282 63 20 chr17 42630165 42631015 -46873538 - HAL1 LINE L1 -823 1684 776 387 379 30 50 chr17 42631184 42631625 -46872928 - HAL1 LINE L1 -2075 432 1 397 288 0 18 chr17 42631999 42632110 -46872443 + MIR SINE MIR 154 262 0 223 350 32 24 chr17 42632170 42632293 -46872260 + L2 LINE L2 2968 3091 -181 208 304 0 0 chr17 42632401 42632457 -46872096 + L2 LINE L2 3242 3297 -16 2277 119 0 6 chr17 42632546 42632857 -46871696 + AluSx SINE Alu 1 309 -3 527 144 10 0 chr17 42632864 42632961 -46871592 + GA-rich Low_complexity Low_complexity 4 101 0 2244 83 45 0 chr17 42633858 42634146 -46870407 + AluSq SINE Alu 1 301 -12 267 299 201 0 chr17 42634441 42634575 -46869978 - L2 LINE L2 -12 3260 3100 1809 155 30 10 chr17 42634964 42635260 -46869293 + AluJb SINE Alu 2 303 -9 1118 174 119 21 chr17 42635264 42635500 -46869053 + AluJo SINE Alu 44 302 -10 2467 102 0 0 chr17 42635503 42635806 -46868747 + AluSx SINE Alu 1 303 -9 264 122 0 0 chr17 42636126 42636167 -46868386 + (TG)n Simple_repeat Simple_repeat 1 41 0 204 290 37 65 chr17 42636278 42636385 -46868168 - MIR SINE MIR -73 135 32 582 232 85 14 chr17 42636729 42636940 -46867613 + L2 LINE L2 2917 3142 -171 226 270 32 0 chr17 42637820 42637883 -46866670 - MER91 DNA MER1_type 0 190 126 2398 103 0 3 chr17 42637883 42638185 -46866368 - AluSx SINE Alu -11 301 1 2651 58 0 0 chr17 42638188 42638497 -46866056 - AluY SINE Alu -2 309 1 1782 188 0 7 chr17 42638497 42638801 -46865752 - AluJo SINE Alu -10 302 1 2000 125 13 26 chr17 42638944 42639247 -46865306 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 42639341 42639440 -46865113 + LTR67 LTR ERVL 432 535 -22 384 301 83 0 chr17 42640275 42640408 -46864145 - MIR3 SINE MIR -3 205 62 866 228 59 0 chr17 42640946 42641148 -46863405 + MIR SINE MIR 2 215 -47 1799 142 0 3 chr17 42641186 42641482 -46863071 - AluSp SINE Alu -16 297 3 522 235 15 0 chr17 42641502 42641634 -46862919 - FRAM SINE Alu -11 165 32 191 685 0 0 chr17 42641775 42641864 -46862689 + G-rich Low_complexity Low_complexity 1 89 0 302 223 85 43 chr17 42643014 42643108 -46861445 - L2 LINE L2 -43 3229 3132 205 319 0 44 chr17 42643616 42643707 -46860846 + CT-rich Low_complexity Low_complexity 6 92 0 455 210 86 43 chr17 42643825 42643987 -46860566 - MIR SINE MIR -70 192 24 309 181 97 0 chr17 42645249 42645321 -46859232 + LTR50 LTR ERVL 717 795 0 1032 241 38 19 chr17 42645472 42645734 -46858819 - MLT1E LTR MaLR 0 593 327 307 245 32 11 chr17 42645991 42646085 -46858468 + MLT1E3 LTR MaLR 384 479 -114 570 209 0 0 chr17 42646778 42646917 -46857636 + (CA)n Simple_repeat Simple_repeat 1 139 0 349 161 0 0 chr17 42647219 42647281 -46857272 - AluSp SINE Alu -106 197 136 1988 125 13 33 chr17 42647424 42647729 -46856824 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 42647823 42647922 -46856631 + LTR67 LTR ERVL 432 535 -22 1765 145 25 18 chr17 42648654 42648968 -46855585 + AluJb SINE Alu 1 316 0 2323 185 44 118 chr17 42649130 42649216 -46855337 - Charlie7 DNA MER1_type -10 2602 2511 2241 130 0 10 chr17 42649216 42649515 -46855038 + AluSx SINE Alu 1 296 -16 2323 185 44 118 chr17 42649515 42650435 -46854118 - Charlie7 DNA MER1_type -101 2511 1671 578 290 158 37 chr17 42650470 42650767 -46853786 - Charlie7 DNA MER1_type -2174 438 106 2724 48 0 0 chr17 42650775 42651085 -46853468 - AluY SINE Alu -1 310 1 674 88 20 0 chr17 42651086 42651188 -46853365 + (TTCC)n Simple_repeat Simple_repeat 2 105 0 2097 119 7 7 chr17 42651196 42651498 -46853055 - AluSx SINE Alu -10 302 1 805 112 32 8 chr17 42651527 42651652 -46852901 - FLAM_C SINE Alu -1 132 5 453 161 0 0 chr17 42652657 42652738 -46851815 + MLT1E3 LTR MaLR 544 624 0 * 1044 186 20 67 chr17 42652738 42652988 -46851565 - MER115 DNA AcHobo -57 636 399 327 326 47 8 chr17 42653091 42653220 -46851333 - MER115 DNA AcHobo -466 227 94 1855 178 57 0 chr17 42653285 42653655 -46850898 - L1MB5 LINE L1 -8 6166 5776 2532 47 0 10 chr17 42654820 42655116 -46849437 - AluY SINE Alu -18 293 1 256 336 82 15 chr17 42655116 42655241 -46849312 - MIR SINE MIR -42 220 84 318 240 125 0 chr17 42655400 42655496 -46849057 - MIR3 SINE MIR -8 200 93 366 181 85 43 chr17 42656091 42656185 -46848368 - L2 LINE L2 -43 3229 3132 1102 151 0 0 chr17 42656379 42656538 -46848015 + FRAM SINE Alu 4 162 -14 201 388 122 0 chr17 42656666 42656813 -46847740 - L2 LINE L2 -557 2757 2593 330 312 28 57 chr17 42656835 42657117 -46847436 - L2 LINE L2 -823 2491 2218 1009 269 106 29 chr17 42657174 42657617 -46846936 + LTR16C LTR ERVL 15 491 0 2468 72 0 13 chr17 42658206 42658510 -46846043 - AluSq SINE Alu -13 300 1 611 228 156 11 chr17 42658540 42658720 -46845833 + MER112 DNA MER1_type 4 209 -51 444 234 18 18 chr17 42658766 42658877 -46845676 + L2 LINE L2 3197 3307 -6 309 305 93 50 chr17 42659465 42659797 -46844756 - L2 LINE L2 -212 3060 2703 646 144 8 24 chr17 42659812 42659826 -46844727 - AluJo/FRAM SINE Alu 0 312 299 2221 108 3 3 chr17 42659826 42660132 -46844421 - AluY SINE Alu -5 306 1 646 144 8 24 chr17 42660132 42660242 -46844311 - AluJo/FRAM SINE Alu -13 299 190 226 122 20 41 chr17 42660370 42660419 -46844134 + (CAGTA)n Simple_repeat Simple_repeat 2 49 0 2469 93 0 0 chr17 42662219 42662531 -46842022 + AluSx SINE Alu 1 312 0 486 272 68 14 chr17 42664004 42664151 -46840402 + MIR SINE MIR 49 203 -59 450 0 0 0 chr17 42664260 42664310 -46840243 + (TG)n Simple_repeat Simple_repeat 1 50 0 537 103 0 35 chr17 42664615 42664702 -46839851 - AluJ/FRAM SINE Alu -11 301 218 832 156 0 0 chr17 42664704 42664832 -46839721 - AluJo/FLAM SINE Alu -174 128 1 189 338 26 13 chr17 42664960 42665037 -46839516 + L2 LINE L2 3099 3176 -96 406 115 0 0 chr17 42665260 42665321 -46839232 - AluS SINE Alu -256 62 2 208 304 0 0 chr17 42665410 42665466 -46839087 - L2 LINE L2 -16 3297 3242 230 333 41 32 chr17 42665574 42665697 -46838856 - L2 LINE L2 -181 3091 2968 454 270 0 18 chr17 42665757 42665868 -46838685 - MIR SINE MIR 0 262 154 387 379 30 50 chr17 42666242 42666683 -46837870 + HAL1 LINE L1 1 432 -2075 1555 272 60 38 chr17 42666852 42667790 -46836763 + HAL1 LINE L1 776 1755 -752 233 301 88 9 chr17 42667859 42667972 -46836581 - L1M4 LINE L1 -2472 3674 3553 758 277 99 52 chr17 42668072 42668537 -46836016 + MLT1J LTR MaLR 25 511 0 24 0 0 0 chr17 42669298 42669322 -46835231 + AT_rich Low_complexity Low_complexity 1 24 0 466 264 117 25 chr17 42669335 42669498 -46835055 + MIR3 SINE MIR 23 200 -8 322 301 82 20 chr17 42669491 42669637 -46834916 - L2 LINE L2 -1 3312 3158 * 260 323 0 0 chr17 42670026 42670091 -46834462 + L2 LINE L2 3149 3213 -59 1596 191 19 117 chr17 42670300 42670354 -46834199 + MLT1C LTR MaLR 1 59 -408 1963 130 60 3 chr17 42670354 42670638 -46833915 + AluSx SINE Alu 1 300 -12 1596 191 19 117 chr17 42670638 42670789 -46833764 + MLT1C LTR MaLR 59 223 -244 2651 67 20 0 chr17 42670789 42671147 -46833406 + L1PA8 LINE L1 5805 6169 -3 1596 191 19 117 chr17 42671147 42671454 -46833099 + MLT1C LTR MaLR 223 464 -3 2115 145 0 3 chr17 42671554 42671851 -46832702 - AluSx SINE Alu -16 296 1 2066 143 0 7 chr17 42671856 42672149 -46832404 - AluJb SINE Alu -21 291 1 487 182 10 0 chr17 42672268 42672367 -46832186 - MER53 DNA DNA -89 100 1 365 304 45 34 chr17 42672943 42673242 -46831311 - L2 LINE L2 -194 3078 2780 1752 253 70 23 chr17 42673604 42674122 -46830431 + MLT1E LTR MaLR 52 593 0 309 181 97 0 chr17 42674273 42674345 -46830208 - LTR50 LTR ERVL 0 795 717 431 320 73 13 chr17 42674704 42674938 -46829615 - L1ME LINE L1 -323 5798 5551 702 279 44 31 chr17 42675123 42675349 -46829204 + MIR SINE MIR 8 236 -26 423 0 0 0 chr17 42675614 42675661 -46828892 + (TG)n Simple_repeat Simple_repeat 2 48 0 450 277 45 116 chr17 42675998 42676290 -46828263 - L2 LINE L2 -3 3269 2999 219 300 73 36 chr17 42676377 42676487 -46828066 + MIR3 SINE MIR 90 203 -5 462 128 0 0 chr17 42676609 42676703 -46827850 + (CA)n Simple_repeat Simple_repeat 2 95 0 235 326 111 23 chr17 42676837 42677009 -46827544 + MIR SINE MIR 64 250 -12 2170 116 0 10 chr17 42677043 42677337 -46827216 + AluSx SINE Alu 7 297 -15 713 268 3 23 chr17 42677469 42677669 -46826884 + MIR SINE MIR 55 249 -13 393 287 23 16 chr17 42677680 42677809 -46826744 - MLT1J1 LTR MaLR 0 446 317 1136 119 50 0 chr17 42677841 42678000 -46826553 - AluSg/x SINE Alu -14 296 130 678 274 75 5 chr17 42678001 42678202 -46826351 - MLT1J1 LTR MaLR -168 278 64 273 362 85 42 chr17 42679238 42679435 -46825118 - L2 LINE L2 -20 3252 3036 2331 88 7 0 chr17 42679435 42679729 -46824824 + AluSq SINE Alu 1 296 -17 273 362 85 42 chr17 42679729 42679838 -46824715 - L2 LINE L2 -236 3036 2933 1999 117 45 7 chr17 42679849 42680139 -46824414 + AluSq SINE Alu 1 301 -12 257 275 133 17 chr17 42680188 42680308 -46824245 + MIR SINE MIR 36 169 -93 736 251 68 5 chr17 42680995 42681202 -46823351 + MIR SINE MIR 36 255 -7 1155 54 0 0 chr17 42681202 42681349 -46823204 + (TTCC)n Simple_repeat Simple_repeat 2 148 0 354 206 241 7 chr17 42682515 42682656 -46821897 - MER5A DNA MER1_type -7 182 9 570 209 0 0 chr17 42683310 42683449 -46821104 + (TG)n Simple_repeat Simple_repeat 1 139 0 316 254 64 9 chr17 42684126 42684236 -46820317 - MLT1E LTR MaLR -94 499 384 247 204 56 0 chr17 42685178 42685232 -46819321 - L2 LINE L2 -3 3310 3254 332 329 62 16 chr17 42685553 42685746 -46818807 - MIR SINE MIR -41 221 20 2352 106 0 0 chr17 42686042 42686344 -46818209 + AluSg SINE Alu 1 302 -8 2322 66 7 7 chr17 42686548 42686837 -46817716 + AluY SINE Alu 19 307 -4 1043 93 79 0 chr17 42686838 42687014 -46817539 + AluSg/x SINE Alu 133 319 0 2481 75 10 3 chr17 42687072 42687380 -46817173 + AluY SINE Alu 1 310 -1 279 283 82 10 chr17 42687705 42687810 -46816743 - MIR SINE MIR -63 145 61 225 315 18 18 chr17 42687949 42688060 -46816493 + CT-rich Low_complexity Low_complexity 2 112 0 220 229 33 0 chr17 42688322 42688383 -46816170 + (TG)n Simple_repeat Simple_repeat 2 64 0 4953 63 0 5 chr17 42688415 42689068 -46815485 - L1PA8 LINE L1 0 6172 5523 739 205 16 54 chr17 42689117 42689302 -46815251 - MER45A DNA AcHobo 0 178 1 277 195 34 34 chr17 42689323 42689441 -46815112 + (TG)n Simple_repeat Simple_repeat 1 118 0 438 259 7 30 chr17 42689826 42689961 -46814592 - MIR3 SINE MIR -12 196 65 249 143 0 0 chr17 42690200 42690242 -46814311 + L2 LINE L2 3258 3299 -14 618 261 140 0 chr17 42690265 42690487 -46814066 + MIR SINE MIR 1 253 -9 251 229 33 0 chr17 42690484 42690545 -46814008 + MIR SINE MIR 74 136 -126 * 202 262 0 0 chr17 42690576 42690618 -46813935 + L2 LINE L2 3215 3256 -16 414 100 0 0 chr17 42692318 42692378 -46812175 + (TG)n Simple_repeat Simple_repeat 1 60 0 434 327 40 15 chr17 42692842 42693041 -46811512 + MIR3 SINE MIR 1 204 -4 881 205 100 0 chr17 42693158 42693348 -46811205 - MIR SINE MIR -46 216 8 473 284 38 1 chr17 42693382 42693536 -46811017 - MIR SINE MIR -57 151 1 507 195 0 35 chr17 42693588 42693701 -46810852 + MIR3 SINE MIR 90 198 -10 1398 181 7 122 chr17 42694853 42695263 -46809290 + MLT1A1 LTR MaLR 3 365 0 1332 158 0 5 chr17 42697971 42698193 -46806360 - AluJb SINE Alu -7 305 85 761 185 32 13 chr17 42698199 42698356 -46806197 + MER5A DNA MER1_type 2 161 -28 280 253 175 39 chr17 42698368 42698522 -46806031 - MER5A DNA MER1_type 0 189 15 310 267 55 14 chr17 42698535 42698681 -46805872 + MIR SINE MIR 30 182 -62 183 222 93 19 chr17 42698727 42698781 -46805772 + L2 LINE L2 3141 3198 -74 229 218 0 64 chr17 42699122 42699200 -46805353 + CT-rich Low_complexity Low_complexity 1 73 0 250 203 47 0 chr17 42701806 42701870 -46802683 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 737 256 122 5 chr17 42704019 42704254 -46800299 - MIR SINE MIR -4 258 8 378 278 56 16 chr17 42704273 42704399 -46800154 - MIR SINE MIR -80 182 52 271 344 38 44 chr17 42704607 42704790 -46799763 + L2 LINE L2 2682 2863 -451 588 134 62 45 chr17 42705891 42706003 -46798550 - MER63 DNA MER1_type -272 790 677 271 309 0 0 chr17 42707790 42707858 -46796695 - L2 LINE L2 0 3313 3246 450 251 30 54 chr17 42707881 42708048 -46796505 + LTR33A LTR ERVL 23 185 -338 222 171 0 0 chr17 42708048 42708089 -46796464 + C-rich Low_complexity Low_complexity 3 43 0 4786 169 35 31 chr17 42708101 42708826 -46795727 - L1MB7 LINE L1 -7 6177 5456 2304 106 0 0 chr17 42708826 42709137 -46795416 - AluSx SINE Alu -1 311 1 4786 169 35 31 chr17 42709137 42710231 -46794322 - L1MB7 LINE L1 -728 5456 4354 * 21379 178 49 19 chr17 42710229 42716531 -46788022 + L1PA12 LINE L1 11 7306 -300 1007 204 29 44 chr17 42716525 42716800 -46787753 - L1MB7 LINE L1 -2226 3920 3650 * 2872 192 66 71 chr17 42716796 42717628 -46786925 - L1MB7 LINE L1 -2895 3251 2423 1699 167 0 30 chr17 42717628 42717928 -46786625 - AluJo SINE Alu -21 291 1 2872 192 66 71 chr17 42717928 42718020 -46786533 - L1MB7 LINE L1 -3723 2423 2332 1202 221 92 0 chr17 42718171 42718442 -46786111 + LTR33A LTR ERVL 228 523 0 307 314 73 0 chr17 42718675 42718799 -46785754 + MIR3 SINE MIR 61 193 -15 1729 172 0 3 chr17 42719135 42719432 -46785121 + AluJo SINE Alu 11 306 -6 380 239 70 35 chr17 42719442 42719584 -46784969 + MIR3 SINE MIR 38 178 -30 5451 43 5 0 chr17 42720519 42721174 -46783379 + L1PA5 LINE L1 5497 6154 0 481 250 83 0 chr17 42721672 42721780 -46782773 - L2 LINE L2 0 3272 3156 1048 189 60 84 chr17 42721794 42722143 -46782410 - MLT1B LTR MaLR 0 390 3 1981 136 0 10 chr17 42722584 42722894 -46781659 + AluJb SINE Alu 1 307 -5 335 311 74 8 chr17 42723213 42723335 -46781218 - L2 LINE L2 0 3272 3143 210 327 131 9 chr17 42723354 42723461 -46781092 - MIR SINE MIR -47 215 96 29 28 0 0 chr17 42725132 42725168 -46779385 + AT_rich Low_complexity Low_complexity 1 36 0 15445 182 31 17 chr17 42725168 42727820 -46776733 - L1PB1 LINE L1 -8 6859 4245 2072 92 41 3 chr17 42727820 42728113 -46776440 - AluY SINE Alu -7 304 1 15445 182 31 17 chr17 42728113 42731426 -46773127 - L1PB1 LINE L1 -2622 4245 663 687 238 54 5 chr17 42731434 42731619 -46772934 - L1PB1 LINE L1 -6664 199 6 202 279 262 8 chr17 42731725 42731847 -46772706 + MIR3 SINE MIR 51 203 -5 430 281 31 68 chr17 42732022 42732306 -46772247 + L2 LINE L2 2781 3053 -219 185 293 0 35 chr17 42732433 42732491 -46772062 + L2 LINE L2 3216 3271 -1 1285 174 0 9 chr17 42732562 42732780 -46771773 + MER57A-int LTR ERV1 253 468 -7069 577 253 129 16 chr17 42732949 42733135 -46771418 - MIR SINE MIR -6 256 50 2353 152 25 8 chr17 42733209 42733588 -46770965 + MER57A LTR ERV1 1 389 -14 2235 100 3 0 chr17 42733588 42733898 -46770655 - AluSq SINE Alu -2 311 1 2353 152 25 8 chr17 42733898 42733914 -46770639 + MER57A LTR ERV1 389 403 0 2263 92 0 13 chr17 42733938 42734241 -46770312 + AluSq SINE Alu 1 299 -14 6794 136 27 48 chr17 42734244 42735447 -46769106 + MER57A-int LTR ERV1 4543 5717 -1820 1944 122 10 0 chr17 42735447 42735741 -46768812 + AluSx SINE Alu 1 297 -15 6794 136 27 48 chr17 42735741 42735844 -46768709 + MER57A-int LTR ERV1 5717 5821 -1716 7519 192 26 15 chr17 42735970 42736542 -46768011 + MER57A-int LTR ERV1 2419 2983 -4554 2673 104 35 24 chr17 42736542 42736965 -46767588 + MSTA LTR MaLR 1 428 0 7519 192 26 15 chr17 42736965 42737904 -46766649 + MER57A-int LTR ERV1 2983 7146 -391 645 138 58 51 chr17 42737904 42738042 -46766511 + LTR54B LTR ERV1 3 141 -357 1379 160 13 9 chr17 42738042 42738273 -46766280 + MER57A-int LTR ERV1 7306 7537 0 2166 160 69 0 chr17 42738273 42738648 -46765905 + MER57A LTR ERV1 1 401 -2 578 272 17 28 chr17 42738898 42739078 -46765475 - LTR67 LTR ERVL -377 180 3 728 214 31 45 chr17 42739203 42739427 -46765126 - L1ME1 LINE L1 -5 6161 5941 781 291 22 0 chr17 42739803 42740026 -46764527 + MER115 DNA AcHobo 143 370 -323 798 214 57 10 chr17 42740060 42740252 -46764301 + MER115 DNA AcHobo 491 691 -2 349 321 136 23 chr17 42740366 42740587 -46763966 - MIR SINE MIR -11 251 6 372 373 26 1 chr17 42740880 42741058 -46763495 + MIR SINE MIR 11 191 -67 205 197 13 105 chr17 42741861 42741937 -46762616 - MIR SINE MIR -87 121 53 225 0 0 0 chr17 42742095 42742120 -46762433 + (CA)n Simple_repeat Simple_repeat 2 26 0 1336 160 0 0 chr17 42742137 42742343 -46762210 - AluJb SINE Alu -23 289 84 320 342 19 7 chr17 42742462 42742617 -46761936 + L3b LINE CR1 1254 1410 -173 310 311 118 0 chr17 42742870 42742989 -46761564 + L2 LINE L2 3172 3304 -9 798 268 117 35 chr17 42743078 42743639 -46760914 + L1ME4a LINE L1 5508 6118 -3 553 274 42 6 chr17 42743764 42743932 -46760621 + MER5B DNA MER1_type 1 174 -4 470 126 147 11 chr17 42743944 42744039 -46760514 - MER3 DNA MER1_type -1 208 101 1266 126 0 0 chr17 42744039 42744213 -46760340 - AluSg/x SINE Alu 0 312 139 363 159 16 32 chr17 42744218 42744281 -46760272 - MER3 DNA MER1_type -99 110 49 1725 181 0 10 chr17 42744313 42744605 -46759948 + AluJb SINE Alu 1 289 -23 508 218 49 14 chr17 42745584 42745725 -46758828 + MIR3 SINE MIR 16 161 -47 448 194 234 24 chr17 42745725 42745849 -46758704 - MER5B DNA MER1_type -1 177 28 1984 103 100 0 chr17 42745849 42746130 -46758423 + AluSx SINE Alu 1 309 -3 328 179 123 0 chr17 42746196 42746281 -46758272 - MER5A DNA MER1_type -88 101 4 414 332 4 23 chr17 42746649 42746845 -46757708 - MIR SINE MIR -41 221 30 221 321 71 0 chr17 42747444 42747528 -46757025 + L2 LINE L2 3184 3273 -40 1752 173 0 0 chr17 42748198 42748475 -46756078 - AluJb SINE Alu -13 299 23 3576 117 66 2 chr17 42748476 42748988 -46755565 - MER41C LTR ERV1 -9 545 1 297 299 11 0 chr17 42749528 42749615 -46754938 - MIR SINE MIR -68 140 53 352 236 118 8 chr17 42750061 42750188 -46754365 + MIR SINE MIR 1 141 -121 255 267 0 0 chr17 42750526 42750612 -46753941 + (CA)n Simple_repeat Simple_repeat 2 87 0 1637 136 18 160 chr17 42750960 42751185 -46753368 - MLT1B LTR MaLR -4 386 255 2280 106 0 3 chr17 42751185 42751486 -46753067 - AluSx SINE Alu -12 300 1 1637 136 18 160 chr17 42751486 42751710 -46752843 - MLT1B LTR MaLR -135 255 1 1883 154 0 32 chr17 42751760 42752071 -46752482 + AluJo SINE Alu 1 301 -11 279 274 38 19 chr17 42752222 42752328 -46752225 - L1ME LINE L1 -252 5869 5762 1703 135 4 30 chr17 42752983 42753250 -46751303 - AluJb SINE Alu -52 260 1 1819 150 0 14 chr17 42753589 42753875 -46750678 + AluJo SINE Alu 1 282 -30 26 50 0 0 chr17 42754590 42754630 -46749923 + AT_rich Low_complexity Low_complexity 1 40 0 571 187 32 8 chr17 42755739 42755862 -46748691 + L2 LINE L2 3184 3309 -4 306 0 0 0 chr17 42756023 42756057 -46748496 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1830 160 7 7 chr17 42756141 42756429 -46748124 + AluJo SINE Alu 1 288 -24 25 31 0 0 chr17 42756429 42756461 -46748092 + AT_rich Low_complexity Low_complexity 1 32 0 218 147 0 0 chr17 42757252 42757286 -46747267 + L3 LINE CR1 1523 1556 -21 189 0 0 0 chr17 42760379 42760400 -46744153 + (T)n Simple_repeat Simple_repeat 1 21 0 1957 113 32 3 chr17 42760402 42760685 -46743868 + AluSx SINE Alu 2 292 -20 292 292 42 0 chr17 42761432 42761528 -46743025 + L2 LINE L2 3172 3271 -1 2307 96 0 0 chr17 42761731 42762024 -46742529 - AluSg SINE Alu -17 293 1 379 204 159 0 chr17 42762039 42762127 -46742426 - MER81 DNA DNA 0 114 13 903 242 59 35 chr17 42762579 42763004 -46741549 - MER39 LTR ERV1 0 647 67 2035 136 10 0 chr17 42763557 42763858 -46740695 + AluSx SINE Alu 1 304 -8 523 268 8 8 chr17 42764144 42764271 -46740282 + MIR SINE MIR 25 151 -111 338 264 28 57 chr17 42764421 42764527 -46740026 + MIR3 SINE MIR 58 160 -48 214 248 184 28 chr17 42764553 42764662 -46739891 - MER5A DNA MER1_type -61 128 3 233 200 17 17 chr17 42765392 42765452 -46739101 + MIR SINE MIR 203 262 0 688 120 0 0 chr17 42765704 42765796 -46738757 - FLAM_C SINE Alu -25 118 27 789 191 49 20 chr17 42765856 42766060 -46738493 - MER113 DNA MER1_type? -310 211 2 365 330 100 25 chr17 42766453 42766692 -46737861 + L3 LINE CR1 1220 1476 -101 244 169 231 0 chr17 42767186 42767251 -46737302 - MER116 DNA Mariner 0 80 1 2131 100 14 0 chr17 42768017 42768308 -46736245 + AluSg SINE Alu 1 295 -15 2125 89 11 11 chr17 42768660 42768942 -46735611 + AluSx SINE Alu 1 282 -30 473 205 12 0 chr17 42771129 42771212 -46733341 + MER3 DNA MER1_type 43 126 -83 * 975 172 166 36 chr17 42771198 42771529 -46733024 + MER3 DNA MER1_type 2248 2621 0 1084 220 29 0 chr17 42772340 42772549 -46732004 - MER58A DNA MER1_type -3 221 7 1977 142 0 0 chr17 42775093 42775374 -46729179 - AluSq SINE Alu -26 287 7 459 200 9 9 chr17 42775406 42775516 -46729037 + MER113 DNA MER1_type? 2 111 -410 1887 168 0 10 chr17 42776199 42776502 -46728051 - AluJo SINE Alu -11 301 2 204 254 74 66 chr17 42778229 42778351 -46726202 - MIR SINE MIR -59 203 81 493 275 121 0 chr17 42778660 42778842 -46725711 - L1MC5 LINE L1 -36 7925 7722 183 80 0 0 chr17 42779100 42779125 -46725428 + (A)n Simple_repeat Simple_repeat 1 25 0 394 249 139 6 chr17 42779223 42779396 -46725157 - L1ME4a LINE L1 -185 5936 5741 224 325 7 46 chr17 42780422 42780573 -46723980 + GA-rich Low_complexity Low_complexity 1 145 0 306 167 0 0 chr17 42785853 42785913 -46718640 + (TGG)n Simple_repeat Simple_repeat 2 61 0 203 184 0 0 chr17 42787758 42787796 -46716757 + A-rich Low_complexity Low_complexity 1 38 0 188 321 9 55 chr17 42788304 42788413 -46716140 + L2 LINE L2 2981 3084 -188 240 303 115 16 chr17 42788980 42789102 -46715451 + L2 LINE L2 3176 3309 -4 458 278 59 18 chr17 42789127 42789296 -46715257 - MIR SINE MIR -65 197 22 260 328 49 69 chr17 42790486 42790834 -46713719 + L2 LINE L2 2922 3262 -10 2282 50 0 18 chr17 42791279 42791562 -46712991 + AluY SINE Alu 17 294 -17 186 43 0 0 chr17 42791563 42791586 -46712967 + (TA)n Simple_repeat Simple_repeat 2 24 0 399 269 210 35 chr17 42791908 42792075 -46712478 + L2 LINE L2 3012 3148 -165 2343 91 13 0 chr17 42792075 42792382 -46712171 - AluSq SINE Alu -2 311 1 399 269 210 35 chr17 42792382 42792471 -46712082 + L2 LINE L2 3148 3313 0 1281 158 47 0 chr17 42792531 42792746 -46711807 + AluJb SINE Alu 84 308 -4 824 235 15 5 chr17 42793970 42794166 -46710387 + MER58A DNA MER1_type 24 221 -3 1843 148 3 36 chr17 42794477 42794781 -46709772 - AluJo SINE Alu -18 294 1 427 135 0 0 chr17 42794891 42794965 -46709588 - MLT1F LTR MaLR -1 541 468 1640 193 10 10 chr17 42794976 42795272 -46709281 - AluJo SINE Alu -15 297 2 265 342 54 36 chr17 42795593 42795704 -46708849 - MIR3 SINE MIR -45 163 51 259 283 94 58 chr17 42795793 42795931 -46708622 + MIR SINE MIR 120 262 0 968 135 0 0 chr17 42796217 42796358 -46708195 - FLAM_C SINE Alu -2 141 1 295 89 36 0 chr17 42796935 42796991 -46707562 + (TA)n Simple_repeat Simple_repeat 2 59 0 216 24 73 0 chr17 42796992 42797033 -46707520 + GA-rich Low_complexity Low_complexity 1 44 0 2164 110 0 17 chr17 42798835 42799136 -46705417 + AluSc SINE Alu 1 296 -13 303 248 72 16 chr17 42799718 42799843 -46704710 + L1ME2 LINE L1 5754 5885 -279 212 139 0 23 chr17 42800326 42800369 -46704184 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 1258 120 0 0 chr17 42800372 42800556 -46703997 - MIR SINE MIR -11 251 68 2116 101 0 60 chr17 42801066 42801383 -46703170 - AluSx SINE Alu -14 298 1 1371 189 22 0 chr17 42801405 42801632 -46702921 - AluJo SINE Alu -80 232 1 2105 109 3 3 chr17 42802193 42802487 -46702066 - AluSg SINE Alu -16 294 1 28 0 0 0 chr17 42802585 42802613 -46701940 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr17 42802760 42802783 -46701770 + (A)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr17 42802854 42802874 -46701679 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1694 137 49 4 chr17 42802878 42803141 -46701412 - AluSx SINE Alu -37 275 1 2047 144 7 3 chr17 42803164 42803469 -46701084 - AluSx SINE Alu -1 311 6 189 209 0 23 chr17 42804158 42804201 -46700352 + MIR3 SINE MIR 156 197 -11 46 68 0 0 chr17 42804784 42804872 -46699681 + AT_rich Low_complexity Low_complexity 1 88 0 654 249 47 80 chr17 42805121 42805481 -46699072 + MLT1H1 LTR MaLR 4 352 -203 21 0 0 0 chr17 42805987 42806008 -46698545 + AT_rich Low_complexity Low_complexity 1 21 0 2541 87 0 0 chr17 42807351 42807662 -46696891 + AluSx SINE Alu 2 312 0 300 244 24 12 chr17 42807918 42808000 -46696553 - MIR SINE MIR -70 138 56 245 313 0 12 chr17 42808694 42808774 -46695779 + MER5A DNA MER1_type 96 174 -15 994 173 72 47 chr17 42808779 42809056 -46695497 - MER33 DNA MER1_type 0 324 41 1816 124 7 28 chr17 42809056 42809346 -46695207 + AluJo SINE Alu 1 284 -28 23 0 0 0 chr17 42809357 42809380 -46695173 + AT_rich Low_complexity Low_complexity 1 23 0 855 220 13 0 chr17 42809768 42809927 -46694626 - MER5B DNA MER1_type -16 162 2 3288 138 21 24 chr17 42810332 42810540 -46694013 - MER67C LTR ERV1 -1 709 502 2083 111 35 0 chr17 42810540 42810829 -46693724 - AluSx SINE Alu -13 299 1 3288 138 21 24 chr17 42810829 42811237 -46693316 - MER67C LTR ERV1 -208 502 95 4266 187 15 23 chr17 42811255 42812145 -46692408 + L1MA9 LINE L1 4723 5618 -694 2430 96 0 0 chr17 42812145 42812457 -46692096 + AluSx SINE Alu 1 312 0 4266 187 15 23 chr17 42812457 42812627 -46691926 + L1MA9 LINE L1 5618 5788 -524 273 29 0 0 chr17 42812627 42812661 -46691892 + (TG)n Simple_repeat Simple_repeat 2 35 0 4266 187 15 23 chr17 42812661 42813163 -46691390 + L1MA9 LINE L1 5788 6274 -38 313 180 11 67 chr17 42813187 42813276 -46691277 - MER67C LTR ERV1 -612 98 15 295 275 138 0 chr17 42813673 42813782 -46690771 + L2 LINE L2 3188 3311 -2 2290 98 3 16 chr17 42815547 42815862 -46688691 - AluSx SINE Alu -1 311 1 21 36 0 0 chr17 42815898 42815926 -46688627 + AT_rich Low_complexity Low_complexity 1 28 0 810 204 23 0 chr17 42816170 42816346 -46688207 - L1MD1 LINE L1 -20 6222 6043 3351 171 30 6 chr17 42816542 42817203 -46687350 + MER67C LTR ERV1 3 679 -31 1310 103 0 0 chr17 42817203 42817378 -46687175 - AluSg/x SINE Alu -4 306 132 240 35 0 0 chr17 42817378 42817407 -46687146 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1620 41 25 0 chr17 42817407 42817603 -46686950 - AluY SINE Alu -28 283 83 183 314 0 0 chr17 42817627 42817678 -46686875 - L2 LINE L2 -220 3052 3002 1010 200 9 0 chr17 42817803 42818013 -46686540 - L1MB5 LINE L1 -6 6168 5957 1190 188 12 4 chr17 42818015 42818260 -46686293 + L1MB5 LINE L1 5701 5947 -227 25 0 0 0 chr17 42819281 42819306 -46685247 + AT_rich Low_complexity Low_complexity 1 25 0 1383 172 118 39 chr17 42820046 42820325 -46684228 + AluJo SINE Alu 1 301 -11 1060 115 6 6 chr17 42821130 42821295 -46683258 - L1PA16 LINE L1 0 6166 6002 30 0 0 0 chr17 42821827 42821857 -46682696 + AT_rich Low_complexity Low_complexity 1 30 0 2175 142 0 0 chr17 42821874 42822183 -46682370 - AluSx SINE Alu -3 309 1 721 162 0 0 chr17 42822668 42822779 -46681774 - FLAM_C SINE Alu -32 111 1 276 280 65 19 chr17 42822779 42822886 -46681667 - L1ME LINE L1 -640 5522 5411 254 321 198 0 chr17 42823819 42823900 -46680653 + L2 LINE L2 3127 3223 -49 328 253 11 0 chr17 42823920 42824015 -46680538 + L1ME3A LINE L1 5822 5917 -253 449 179 205 17 chr17 42824016 42824133 -46680420 + MIR SINE MIR 50 188 -74 476 250 86 40 chr17 42824156 42824308 -46680245 + MIR SINE MIR 28 186 -76 594 0 0 0 chr17 42824553 42824619 -46679934 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 2282 93 0 0 chr17 42824620 42824899 -46679654 - AluSx SINE Alu -33 279 1 953 129 0 0 chr17 42825033 42825165 -46679388 + AluSg/x SINE Alu 155 286 -26 297 51 0 0 chr17 42825165 42825204 -46679349 + (CATA)n Simple_repeat Simple_repeat 2 40 0 238 91 0 0 chr17 42825208 42825241 -46679312 + MER112 DNA MER1_type 222 254 -6 2153 97 3 10 chr17 42826111 42826400 -46678153 + AluSx SINE Alu 11 297 -15 761 191 113 39 chr17 42827058 42827262 -46677291 + MER20 DNA MER1_type 1 219 0 418 259 65 94 chr17 42827408 42827578 -46676975 - MIR3 SINE MIR -7 201 37 2041 143 3 0 chr17 42827784 42828091 -46676462 - AluSx SINE Alu -4 308 1 2256 104 0 3 chr17 42828601 42828908 -46675645 - AluSp SINE Alu -7 306 1 21 36 0 0 chr17 42829672 42829700 -46674853 + AT_rich Low_complexity Low_complexity 1 28 0 2468 99 0 0 chr17 42830177 42830490 -46674063 - AluSq SINE Alu 0 313 1 33 73 0 0 chr17 42831492 42831560 -46672993 + AT_rich Low_complexity Low_complexity 1 68 0 3728 40 0 2 chr17 42831560 42832013 -46672540 - L1PA4 LINE L1 -5 6150 5699 25 0 0 0 chr17 42832423 42832448 -46672105 + AT_rich Low_complexity Low_complexity 1 25 0 2040 123 34 0 chr17 42832701 42832993 -46671560 - AluSx SINE Alu -10 302 1 743 301 193 35 chr17 42833727 42834162 -46670391 + L3 LINE CR1 1073 1576 -1 21 0 0 0 chr17 42834365 42834386 -46670167 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 42834607 42834636 -46669917 + AT_rich Low_complexity Low_complexity 1 29 0 808 127 0 0 chr17 42834743 42834861 -46669692 + AluJ SINE Alu 1 118 -184 391 237 86 29 chr17 42835378 42835517 -46669036 + MIR SINE MIR 105 251 -11 2150 118 0 3 chr17 42835682 42835971 -46668582 - AluJb SINE Alu -13 299 12 1232 116 0 0 chr17 42835987 42836151 -46668402 + AluJ SINE Alu 105 268 -44 2313 57 40 7 chr17 42836855 42837152 -46667401 + AluSg SINE Alu 1 307 -3 1802 145 42 7 chr17 42837241 42837530 -46667023 + AluJb SINE Alu 1 299 -13 2257 152 132 35 chr17 42839280 42839794 -46664759 + LTR6A LTR ERV1 1 564 0 1371 134 0 71 chr17 42840696 42840785 -46663768 - AluJo SINE Alu -90 222 128 2202 133 0 0 chr17 42840785 42841085 -46663468 - AluJb SINE Alu -12 300 1 1371 134 0 71 chr17 42841085 42841234 -46663319 - AluJo SINE Alu -184 128 1 2235 99 0 29 chr17 42842497 42842809 -46661744 - AluSg SINE Alu -7 303 1 975 187 0 0 chr17 42842811 42842977 -46661576 - FRAM SINE Alu -17 159 1 207 88 0 0 chr17 42843632 42843666 -46660887 + (TA)n Simple_repeat Simple_repeat 1 34 0 2140 110 0 29 chr17 42843906 42844216 -46660337 - AluSx SINE Alu -11 301 1 336 244 135 52 chr17 42845343 42845536 -46659017 + L1M2 LINE L1 401 609 -6240 1597 137 11 46 chr17 42846627 42846791 -46657762 + L1MB2 LINE L1 5896 6047 -124 2215 94 7 3 chr17 42846791 42847090 -46657463 + AluSx SINE Alu 1 300 -12 1597 137 11 46 chr17 42847090 42847209 -46657344 + L1MB2 LINE L1 6047 6169 -2 1050 106 0 0 chr17 42847818 42847960 -46656593 + AluSg/x SINE Alu 160 301 -9 4100 121 35 23 chr17 42848468 42848985 -46655568 - L1MA3 LINE L1 -1 6304 5776 2270 95 10 0 chr17 42848985 42849279 -46655274 - AluSq SINE Alu -16 297 1 4100 121 35 23 chr17 42849279 42849414 -46655139 - L1MA3 LINE L1 -529 5776 5644 207 298 19 29 chr17 42850662 42850766 -46653787 + MIR3 SINE MIR 92 194 -14 2342 90 10 0 chr17 42850838 42851148 -46653405 - AluSp SINE Alu 0 313 1 997 236 51 5 chr17 42851448 42851664 -46652889 + MER21B LTR ERV1 79 304 -559 2994 100 24 0 chr17 42851673 42852137 -46652416 + MER1A DNA MER1_type 1 528 -1 1627 234 44 48 chr17 42852137 42852428 -46652125 + MER21B LTR ERV1 307 597 -266 2906 96 43 21 chr17 42852428 42852847 -46651706 - MSTA LTR MaLR 0 428 1 1627 234 44 48 chr17 42852847 42852990 -46651563 + MER21B LTR ERV1 597 739 -124 1082 156 0 22 chr17 42853058 42853237 -46651316 + FRAM SINE Alu 2 176 0 424 274 95 25 chr17 42853244 42853612 -46650941 + L1M4 LINE L1 2957 3350 -2796 1961 131 0 3 chr17 42854581 42854910 -46649643 + AluY SINE Alu 1 328 0 993 263 88 85 chr17 42854961 42855144 -46649409 - L1ME4a LINE L1 -5 6116 5935 2485 141 50 29 chr17 42855144 42855563 -46648990 + MSTA LTR MaLR 1 428 0 993 263 88 85 chr17 42855563 42856170 -46648383 - L1ME4a LINE L1 -186 5935 5317 772 260 64 30 chr17 42857091 42857387 -46647166 - LTR16A LTR ERVL -9 441 136 1415 160 133 27 chr17 42857522 42857785 -46646768 - AluJb SINE Alu -21 291 1 4107 171 8 38 chr17 42858003 42858725 -46645828 + L1MB8 LINE L1 5429 6128 -50 1996 143 10 13 chr17 42858725 42859026 -46645527 + AluSx SINE Alu 1 300 -12 4107 171 8 38 chr17 42859026 42859076 -46645477 + L1MB8 LINE L1 6128 6178 0 1293 159 9 22 chr17 42859768 42859995 -46644558 + L1M4 LINE L1 5491 5714 -464 1653 175 7 7 chr17 42860003 42860138 -46644415 + AluJb SINE Alu 2 136 -176 2400 91 0 0 chr17 42860138 42860434 -46644119 + AluSc SINE Alu 1 296 -13 1653 175 7 7 chr17 42860434 42860584 -46643969 + AluJb SINE Alu 135 287 -25 477 155 93 0 chr17 42861335 42861432 -46643121 - MIR SINE MIR -25 237 132 2092 117 0 14 chr17 42862365 42862655 -46641898 - AluSx SINE Alu -26 286 1 1161 257 210 42 chr17 42864870 42865223 -46639330 + L2 LINE L2 2148 2440 -873 2058 127 7 3 chr17 42865223 42865523 -46639030 - AluSx SINE Alu -11 301 1 1161 257 210 42 chr17 42865523 42866171 -46638382 + L2 LINE L2 2440 3313 0 2934 87 11 3 chr17 42866325 42866695 -46637858 + THE1C LTR MaLR 3 375 0 7153 166 70 11 chr17 42866823 42867590 -46636963 + Looper DNA T2_type 3 723 -835 2675 92 20 11 chr17 42867590 42867948 -46636605 + THE1B LTR MaLR 4 364 0 7153 166 70 11 chr17 42867948 42868649 -46635904 + Looper DNA T2_type 723 1558 0 231 291 111 85 chr17 42868654 42868853 -46635700 + LTR16A LTR ERVL 247 450 0 294 338 0 0 chr17 42868853 42868930 -46635623 - MIR SINE MIR -87 121 45 193 277 46 15 chr17 42869040 42869105 -46635448 + MIR SINE MIR 102 168 -94 24 32 0 0 chr17 42869364 42869395 -46635158 + AT_rich Low_complexity Low_complexity 1 31 0 2684 36 0 10 chr17 42870274 42870583 -46633970 - AluY SINE Alu -5 306 1 184 375 14 14 chr17 42870636 42870708 -46633845 - MIR SINE MIR -103 105 34 256 303 16 0 chr17 42871008 42871130 -46633423 + (TTTA)n Simple_repeat Simple_repeat 3 126 0 226 120 67 0 chr17 42871132 42871207 -46633346 + (TA)n Simple_repeat Simple_repeat 1 80 0 1098 172 52 0 chr17 42871207 42871399 -46633154 - AluJb SINE Alu -27 285 84 207 279 163 23 chr17 42871453 42871539 -46633014 - L2 LINE L2 -16 3297 3200 1037 189 0 16 chr17 42871547 42871732 -46632821 + AluJo SINE Alu 87 268 -44 231 267 33 0 chr17 42872362 42872422 -46632131 - L2 LINE L2 -8 3264 3203 672 300 40 36 chr17 42872538 42872785 -46631768 + MIR SINE MIR 2 249 -13 22 0 0 0 chr17 42872965 42872987 -46631566 + AT_rich Low_complexity Low_complexity 1 22 0 353 321 38 0 chr17 42873504 42873610 -46630943 - MIR SINE MIR -65 143 34 345 303 95 10 chr17 42874404 42874580 -46629973 + MIR3 SINE MIR 1 187 -68 2159 110 0 0 chr17 42875217 42875507 -46629046 - AluSg SINE Alu -20 290 1 2123 125 10 0 chr17 42875507 42875810 -46628743 - AluSx SINE Alu -5 307 1 3792 163 5 2 chr17 42876007 42876601 -46627952 + MER77 LTR ERV1 3 598 -7 830 159 30 0 chr17 42877343 42877475 -46627078 + AluJo SINE Alu 2 137 -175 218 235 106 24 chr17 42877535 42877620 -46626933 + MIR3 SINE MIR 107 198 -10 23 0 0 0 chr17 42877627 42877650 -46626903 + AT_rich Low_complexity Low_complexity 1 23 0 798 250 64 13 chr17 42877661 42877897 -46626656 - MIR SINE MIR -2 260 13 1658 166 42 3 chr17 42878476 42878759 -46625794 - AluJb SINE Alu -18 294 1 208 352 0 0 chr17 42878796 42878850 -46625703 - MER91 DNA MER1_type -12 184 131 1039 169 21 0 chr17 42879316 42879505 -46625048 + L1MD3 LINE L1 7794 7986 -9 252 348 70 32 chr17 42879602 42879760 -46624793 - L2 LINE L2 -34 3238 3075 525 292 176 18 chr17 42879810 42880216 -46624337 + L2 LINE L2 2583 3084 -229 1933 240 55 16 chr17 42880216 42880762 -46623791 + MER74B LTR ERVL 56 622 0 180 94 0 94 chr17 42880763 42880795 -46623758 + L2 LINE L2 3200 3228 -85 1752 162 0 17 chr17 42881737 42882039 -46622514 - AluJo SINE Alu -15 297 1 529 200 0 0 chr17 42882579 42882664 -46621889 + MER21B LTR ERV1 12 96 -767 2824 226 50 25 chr17 42882669 42883351 -46621202 + MER21B LTR ERV1 41 739 -124 295 267 35 0 chr17 42883428 42883544 -46621009 - L1ME3A LINE L1 -219 5951 5832 1160 218 199 14 chr17 42883545 42883907 -46620646 - LTR16A LTR ERVL -1 449 21 1113 277 93 14 chr17 42883937 42884128 -46620425 - L1ME3A LINE L1 -339 5831 5656 2019 179 28 30 chr17 42884128 42884491 -46620062 - MLT1A1 LTR MaLR -3 362 1 1113 277 93 14 chr17 42884491 42884794 -46619759 - L1ME3A LINE L1 -514 5656 5298 192 217 0 0 chr17 42884827 42884873 -46619680 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 958 323 86 28 chr17 42884875 42885619 -46618934 - L1MEd LINE L1 -5063 1056 270 2673 102 54 27 chr17 42885778 42886123 -46618430 + MER83 LTR ERV1 3 362 -86 1763 166 13 13 chr17 42886123 42886424 -46618129 - AluSx SINE Alu -11 301 1 2673 102 54 27 chr17 42886424 42886488 -46618065 + MER83 LTR ERV1 362 423 -25 1633 122 0 0 chr17 42886538 42886752 -46617801 - AluSx SINE Alu -98 214 1 1234 273 120 13 chr17 42887541 42888062 -46616491 - L2 LINE L2 0 3313 2741 628 157 78 0 chr17 42888063 42888165 -46616388 - AluJb SINE Alu -16 296 187 722 269 45 15 chr17 42888279 42888480 -46616073 + MER63A DNA MER1_type 4 210 0 2325 95 65 9 chr17 42888592 42888928 -46615625 - THE1A LTR MaLR 0 355 1 349 248 124 16 chr17 42889515 42889644 -46614909 - MIR SINE MIR 0 262 120 4006 76 19 4 chr17 42890579 42891091 -46613462 + L1PA14 LINE L1 5639 6158 -3 553 252 13 50 chr17 42891309 42891468 -46613085 + MER63A DNA MER1_type 58 210 0 268 254 0 0 chr17 42891490 42891553 -46613000 - L1ME1 LINE L1 -31 6135 6073 244 167 109 7 chr17 42891785 42891840 -46612713 + L1ME2 LINE L1 6005 6060 -104 708 285 87 27 chr17 42893253 42893551 -46611002 - L3 LINE CR1 -11 1566 1251 447 68 0 0 chr17 42893728 42893787 -46610766 + (TG)n Simple_repeat Simple_repeat 2 60 0 582 294 44 18 chr17 42893867 42894095 -46610458 + MIR SINE MIR 28 261 -1 188 128 0 21 chr17 42894472 42894519 -46610034 + (TA)n Simple_repeat Simple_repeat 2 47 0 431 254 165 51 chr17 42894613 42894947 -46609606 + MARNA DNA Mariner 201 572 -14 25 0 0 0 chr17 42895078 42895103 -46609450 + AT_rich Low_complexity Low_complexity 1 25 0 2497 50 40 0 chr17 42895288 42895587 -46608966 + AluY SINE Alu 1 311 0 1289 91 0 0 chr17 42896446 42896611 -46607942 + AluSq SINE Alu 140 304 -9 4431 154 51 39 chr17 42898019 42898032 -46606521 - L1MA8 LINE L1 -10 6169 6158 2163 140 0 3 chr17 42898032 42898340 -46606213 + AluSx SINE Alu 1 307 -5 4431 154 51 39 chr17 42898340 42898654 -46605899 - L1MA8 LINE L1 -21 6158 5849 2363 73 0 10 chr17 42898654 42898954 -46605599 - AluY SINE Alu -14 297 1 4431 154 51 39 chr17 42898954 42900438 -46604115 - L1MA8 LINE L1 -330 5849 4346 4232 238 59 32 chr17 42900427 42902244 -46602309 - L1MA8 LINE L1 -2978 3056 1288 * 1070 40 0 0 chr17 42902244 42902369 -46602184 - L1PA8 LINE L1 -13 6159 6035 4232 238 59 32 chr17 42902369 42903032 -46601521 - L1MA8 LINE L1 -4746 1288 954 1981 167 0 0 chr17 42903032 42903326 -46601227 - AluJb SINE Alu -18 294 1 4232 238 59 32 chr17 42903326 42904099 -46600454 - L1MA8 LINE L1 -5080 954 203 1427 289 60 17 chr17 42904224 42904798 -46599755 - L1M3a LINE L1 -5501 454 12 2235 228 48 8 chr17 42904835 42905496 -46599057 - L1M4 LINE L1 -3251 2895 2208 263 305 32 21 chr17 42905493 42905588 -46598965 + L1ME LINE L1 5647 5742 -428 * 282 195 25 16 chr17 42905619 42905734 -46598819 - L1P5 LINE L1 -675 5479 5365 * 293 280 65 15 chr17 42905731 42905931 -46598622 - HAL1 LINE L1 -928 1579 1370 565 318 28 6 chr17 42906960 42907159 -46597394 + MIR SINE MIR 34 237 -25 342 67 0 0 chr17 42908322 42908367 -46596186 + (TTTC)n Simple_repeat Simple_repeat 1 45 0 2302 107 0 0 chr17 42908607 42908905 -46595648 - AluSx SINE Alu -9 303 6 242 322 70 61 chr17 42910092 42910306 -46594247 - MIR SINE MIR 0 262 47 2021 138 7 0 chr17 42911031 42911327 -46593226 - AluSx SINE Alu -14 298 1 1978 125 7 24 chr17 42912556 42912851 -46591702 - AluSx SINE Alu -11 301 12 24 32 0 0 chr17 42912975 42913006 -46591547 + AT_rich Low_complexity Low_complexity 1 31 0 261 163 23 0 chr17 42913397 42913440 -46591113 - L2 LINE L2 -40 3273 3230 21 0 0 0 chr17 42914206 42914227 -46590326 + AT_rich Low_complexity Low_complexity 1 21 0 560 136 29 100 chr17 42914468 42914608 -46589945 - FLAM_C SINE Alu -1 132 3 30 27 0 0 chr17 42915223 42915260 -46589293 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr17 42915468 42915496 -46589057 + AT_rich Low_complexity Low_complexity 1 28 0 961 200 91 9 chr17 42916629 42916849 -46587704 + MIR SINE MIR 4 241 -21 2508 37 7 3 chr17 42916997 42917293 -46587260 + AluY SINE Alu 10 306 -5 2804 139 13 2 chr17 42917309 42917782 -46586771 - L1MC1 LINE L1 -202 6131 5654 184 310 184 0 chr17 42918407 42918494 -46586059 + L2 LINE L2 3155 3257 -15 273 326 28 73 chr17 42920304 42920482 -46584071 + MIR SINE MIR 10 179 -83 1978 133 35 13 chr17 42920714 42921089 -46583464 - L1MA5 LINE L1 0 6300 5918 791 212 7 7 chr17 42921787 42921938 -46582615 - FRAM SINE Alu -15 151 1 2242 42 42 11 chr17 42922451 42922765 -46581788 + AluY SINE Alu 1 311 0 2256 103 3 0 chr17 42923311 42923601 -46580952 - AluSx SINE Alu -21 291 1 22 56 0 0 chr17 42923757 42923793 -46580760 + AT_rich Low_complexity Low_complexity 1 36 0 335 218 39 0 chr17 42924983 42925061 -46579492 + MIR3 SINE MIR 106 186 -22 1911 140 11 3 chr17 42925427 42925713 -46578840 - AluJb SINE Alu -14 298 11 1887 186 16 27 chr17 42925820 42926161 -46578392 + MER45R DNA AcHobo 1145 1481 -100 2326 91 14 0 chr17 42926161 42926458 -46578095 - AluSx SINE Alu -11 301 1 1887 186 16 27 chr17 42926458 42926556 -46577997 + MER45R DNA AcHobo 1481 1579 -2 336 257 75 47 chr17 42926684 42927069 -46577484 + HAL1 LINE L1 786 1181 -1326 2275 103 0 0 chr17 42927100 42927392 -46577161 - AluSx SINE Alu -19 293 2 1961 196 13 47 chr17 42927394 42927864 -46576689 + MER101 LTR ERV1 21 474 0 314 270 57 43 chr17 42927879 42927897 -46576656 + HAL1 LINE L1 1167 1183 -1324 2483 43 30 3 chr17 42927897 42928200 -46576353 + AluY SINE Alu 1 311 0 314 270 57 43 chr17 42928200 42928411 -46576142 + HAL1 LINE L1 1183 1399 -1108 2240 107 0 10 chr17 42928549 42928849 -46575704 + AluSx SINE Alu 1 297 -15 461 186 0 0 chr17 42928976 42929062 -46575491 + HAL1 LINE L1 1617 1702 -805 323 305 48 38 chr17 42929131 42929236 -46575317 + HAL1 LINE L1 1822 1927 -580 2171 112 3 0 chr17 42929650 42929937 -46574616 - AluSx SINE Alu -24 288 1 3553 212 37 51 chr17 42931286 42931764 -46572789 + MER45B DNA AcHobo 1 484 -1097 2216 112 0 0 chr17 42931764 42932058 -46572495 - AluSx SINE Alu -18 294 1 3553 212 37 51 chr17 42932058 42932452 -46572101 + MER45B DNA AcHobo 484 862 -719 1757 133 78 36 chr17 42932452 42932812 -46571741 + THE1C LTR MaLR 1 375 0 3553 212 37 51 chr17 42932812 42932883 -46571670 + MER45B DNA AcHobo 862 932 -108 204 40 0 0 chr17 42932886 42932911 -46571642 + (CAA)n Simple_repeat Simple_repeat 2 26 0 623 250 0 7 chr17 42932938 42933086 -46571467 + MER45B DNA AcHobo 894 1040 0 1322 194 85 0 chr17 42933427 42933720 -46570833 + MER58B DNA MER1_type 24 341 0 2207 101 0 0 chr17 42934702 42934978 -46569575 + AluSx SINE Alu 14 289 -23 213 39 0 0 chr17 42934981 42935007 -46569546 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 308 246 166 23 chr17 42935994 42936169 -46568384 + MER20B DNA MER1_type 19 218 -565 367 237 116 35 chr17 42936845 42937018 -46567535 + MER20B DNA MER1_type 593 779 -4 702 244 145 18 chr17 42987996 42988217 -46516336 + MIR SINE MIR 3 251 -11 216 384 76 21 chr17 42988453 42988690 -46515863 + L2 LINE L2 2458 2707 -607 342 260 15 0 chr17 42988829 42988916 -46515637 + MIR SINE MIR 66 153 -62 191 376 43 43 chr17 42989016 42989178 -46515375 + L2 LINE L2 2889 3050 -222 1318 92 19 67 chr17 42989790 42990017 -46514536 + L1MA3 LINE L1 5144 5356 -850 1407 151 174 8 chr17 42990017 42990276 -46514277 + AluJo SINE Alu 1 302 0 1318 92 19 67 chr17 42990276 42990380 -46514173 + L1MA3 LINE L1 5356 5463 -743 5348 115 14 14 chr17 42990420 42991280 -46513273 + L1MA3 LINE L1 5446 6305 0 207 289 24 36 chr17 42992308 42992391 -46512162 - MIR SINE MIR -19 243 162 2158 115 13 7 chr17 42992395 42992699 -46511854 - AluSp SINE Alu -7 306 1 1749 151 41 0 chr17 42992727 42992849 -46511704 + AluJb SINE Alu 1 117 -195 435 38 0 0 chr17 42992849 42992902 -46511651 + (CA)n Simple_repeat Simple_repeat 2 54 0 1749 151 41 0 chr17 42992902 42993050 -46511503 + AluJb SINE Alu 117 282 -30 2076 132 30 40 chr17 42994106 42994507 -46510046 + L1MA4 LINE L1 5897 6293 -7 180 0 0 0 chr17 42995615 42995635 -46508918 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr17 42995870 42995898 -46508655 + AT_rich Low_complexity Low_complexity 1 28 0 775 122 72 44 chr17 42995966 42996147 -46508406 + MER53 DNA DNA 3 188 -1 28 61 0 0 chr17 42996180 42996229 -46508324 + AT_rich Low_complexity Low_complexity 1 49 0 540 268 66 57 chr17 42996623 42996779 -46507774 + MIR SINE MIR 10 170 -92 2209 116 10 0 chr17 42996779 42997073 -46507480 - AluSx SINE Alu -15 297 1 540 268 66 57 chr17 42997073 42997144 -46507409 + MIR SINE MIR 170 239 -23 189 0 0 0 chr17 42997533 42997554 -46506999 + (T)n Simple_repeat Simple_repeat 1 21 0 1527 184 50 14 chr17 42997777 42998054 -46506499 + AluJb SINE Alu 2 288 -24 441 0 0 0 chr17 42998680 42998729 -46505824 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 355 176 290 15 chr17 42999165 42999296 -46505257 + MIR SINE MIR 90 256 -6 246 167 0 0 chr17 42999375 42999417 -46505136 - L2 LINE L2 -5 3308 3267 626 224 270 39 chr17 43000667 43000993 -46503560 + LTR33 LTR ERVL 16 265 -256 2336 76 3 0 chr17 43000993 43001284 -46503269 - AluSg SINE Alu -18 292 1 626 224 270 39 chr17 43001284 43001364 -46503189 + LTR33 LTR ERVL 265 516 -5 277 367 51 0 chr17 43001451 43001549 -46503004 + L2 LINE L2 3142 3244 -28 2275 105 0 3 chr17 43002225 43002521 -46502032 + AluSx SINE Alu 1 295 -17 339 308 34 17 chr17 43002527 43002644 -46501909 - MIR3 SINE MIR -5 203 85 1007 71 0 2 chr17 43004280 43004491 -46500062 + AluSc SINE Alu 37 282 -27 234 128 0 0 chr17 43004491 43004530 -46500023 + (CA)n Simple_repeat Simple_repeat 1 39 0 843 347 131 34 chr17 43004747 43005950 -46498603 - L2 LINE L2 -20 3252 1936 198 340 80 66 chr17 43006160 43006586 -46497967 - L2 LINE L2 -1080 2234 1803 223 234 0 0 chr17 43006759 43006776 -46497777 + GA-rich Low_complexity Low_complexity 1 17 -30 2533 83 3 0 chr17 43006776 43007088 -46497465 + AluSp SINE Alu 1 313 0 223 234 0 0 chr17 43007088 43007117 -46497436 + GA-rich Low_complexity Low_complexity 16 47 0 23 33 0 0 chr17 43007583 43007613 -46496940 + AT_rich Low_complexity Low_complexity 1 30 0 378 286 57 17 chr17 43007814 43007989 -46496564 - MER117 DNA MER1_type -1 196 15 2509 81 0 3 chr17 43007995 43008303 -46496250 - AluSc SINE Alu -2 307 1 191 331 204 35 chr17 43008585 43008757 -46495796 + MIR SINE MIR 43 243 -19 620 316 191 16 chr17 43008809 43009129 -46495424 - L3 LINE CR1 -88 1489 1114 27 49 0 0 chr17 43009283 43009324 -46495229 + AT_rich Low_complexity Low_complexity 1 41 0 453 208 0 0 chr17 43011561 43011638 -46492915 + AluJ/FLAM SINE Alu 1 77 -235 541 279 42 107 chr17 43011710 43012093 -46492460 - L2 LINE L2 -8 3264 2907 282 210 0 25 chr17 43012096 43012177 -46492376 + L1MA9 LINE L1 6195 6273 -39 458 321 144 4 chr17 43012187 43012464 -46492089 - L2 LINE L2 -420 2894 2579 28 61 0 0 chr17 43013395 43013444 -46491109 + AT_rich Low_complexity Low_complexity 1 49 0 186 231 0 19 chr17 43013681 43013728 -46490825 + L2 LINE L2 3263 3309 0 3382 146 6 2 chr17 43013728 43014257 -46490296 + LTR26B LTR ERV1 1 531 0 2082 61 0 4 chr17 43014319 43014581 -46489972 + L1PA7 LINE L1 5894 6154 0 2343 80 0 0 chr17 43015370 43015658 -46488895 - AluY SINE Alu -23 288 1 723 164 0 0 chr17 43015804 43015920 -46488633 + FRAM SINE Alu 39 154 -22 479 256 228 19 chr17 43016189 43016400 -46488153 - MIR SINE MIR 0 262 8 291 120 0 20 chr17 43016450 43016500 -46488053 + MER63 DNA MER1_type 700 748 -88 235 284 81 0 chr17 43016504 43016578 -46487975 + MER63 DNA MER1_type 979 1058 -4 952 201 58 64 chr17 43016661 43016974 -46487579 - L1ME1 LINE L1 -7 6159 5849 2302 84 0 0 chr17 43017332 43017640 -46486913 - AluSx SINE Alu 0 308 1 1140 212 45 2 chr17 43018215 43018543 -46486010 + MLT1A1 LTR MaLR 1 368 -6 459 240 124 10 chr17 43018798 43018993 -46485560 - MLT1F LTR MaLR -338 229 1 2211 112 0 3 chr17 43019032 43019328 -46485225 + AluSc SINE Alu 1 295 -14 1975 148 0 44 chr17 43019851 43020168 -46484385 - AluJb SINE Alu -9 303 1 664 277 84 34 chr17 43020367 43020605 -46483948 - MIR SINE MIR 0 262 13 2241 121 0 0 chr17 43020953 43021260 -46483293 - AluSc SINE Alu -2 307 1 295 266 212 0 chr17 43021310 43021423 -46483130 + L2 LINE L2 3136 3272 0 727 154 0 24 chr17 43021613 43021736 -46482817 - FLAM_C SINE Alu -23 120 1 1773 155 3 37 chr17 43022566 43022889 -46481664 - AluJo SINE Alu 0 312 1 23 0 0 0 chr17 43022973 43022996 -46481557 + AT_rich Low_complexity Low_complexity 1 23 0 1184 171 95 4 chr17 43024409 43024469 -46480084 + ORSL DNA AcHobo 1 54 -221 342 0 0 0 chr17 43024469 43024507 -46480046 + (CA)n Simple_repeat Simple_repeat 2 39 0 1184 171 95 4 chr17 43024507 43024698 -46479855 + ORSL DNA AcHobo 54 275 0 219 24 24 48 chr17 43025132 43025174 -46479379 + (CA)n Simple_repeat Simple_repeat 2 42 0 2035 88 0 0 chr17 43026111 43026373 -46478180 + AluSg SINE Alu 49 310 0 193 358 30 0 chr17 43028006 43028073 -46476480 + L2 LINE L2 3200 3268 -4 22 70 0 0 chr17 43028693 43028736 -46475817 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr17 43029767 43029788 -46474765 + AT_rich Low_complexity Low_complexity 1 21 0 1253 102 89 31 chr17 43029799 43030024 -46474529 - L1PA16 LINE L1 -1 6165 5928 24 0 0 0 chr17 43031131 43031155 -46473398 + AT_rich Low_complexity Low_complexity 1 24 0 473 315 32 55 chr17 43031542 43031644 -46472909 - MIR SINE MIR -6 256 153 1644 166 3 56 chr17 43031644 43031963 -46472590 - AluJo SINE Alu -10 302 1 473 315 32 55 chr17 43031963 43032079 -46472474 - MIR SINE MIR -109 153 43 336 207 30 96 chr17 43034901 43035036 -46469517 + MIR SINE MIR 29 154 -108 180 305 0 73 chr17 43035132 43035214 -46469339 - L2 LINE L2 -1 3271 3196 501 179 66 0 chr17 43035285 43035391 -46469162 + MIR SINE MIR 150 262 0 1245 117 17 30 chr17 43035576 43035807 -46468746 - L1MB7 LINE L1 -272 5912 5685 1647 147 25 0 chr17 43035807 43036089 -46468464 + L1MB7 LINE L1 5892 6184 0 2405 169 0 15 chr17 43037408 43037810 -46466743 + MSTD LTR MaLR 1 396 0 344 313 16 68 chr17 43039261 43039313 -46465240 + MLT1I LTR MaLR 99 152 -257 2000 112 4 0 chr17 43039313 43039580 -46464973 - AluSx SINE Alu -8 304 37 344 313 16 68 chr17 43039580 43039719 -46464834 + MLT1I LTR MaLR 152 280 -129 1331 119 0 0 chr17 43039873 43040067 -46464486 + L1PA13 LINE L1 5951 6144 -19 212 258 22 34 chr17 43040464 43040553 -46464000 + GA-rich Low_complexity Low_complexity 3 90 0 208 165 252 107 chr17 43040897 43041000 -46463553 - MIR SINE MIR 0 262 145 315 0 0 0 chr17 43041743 43041778 -46462775 + (TG)n Simple_repeat Simple_repeat 2 36 0 1824 163 0 14 chr17 43041779 43042062 -46462491 - AluJb SINE Alu -27 285 7 1250 151 0 0 chr17 43042378 43042563 -46461990 - AluSg/x SINE Alu -2 308 124 300 286 60 48 chr17 43042638 43042806 -46461747 + L3 LINE CR1 1161 1330 -247 2219 110 0 0 chr17 43043197 43043525 -46461028 - AluSx SINE Alu 0 312 1 344 374 147 22 chr17 43043762 43044075 -46460478 + L2 LINE L2 2920 3271 -1 21 0 0 0 chr17 43045961 43045982 -46458571 + AT_rich Low_complexity Low_complexity 1 21 0 214 182 15 61 chr17 43046938 43047004 -46457549 + (TTAA)n Simple_repeat Simple_repeat 1 63 0 1871 159 3 20 chr17 43047919 43048221 -46456332 - AluJb SINE Alu -15 297 1 2293 105 0 0 chr17 43048222 43048527 -46456026 - AluSc SINE Alu -4 305 1 336 245 29 20 chr17 43049208 43049310 -46455243 + L1MC5 LINE L1 7779 7881 -80 562 304 117 24 chr17 43049535 43050206 -46454347 + L1ME3A LINE L1 917 1696 -4614 1592 80 71 0 chr17 43050440 43050652 -46453901 + L1PA11 LINE L1 5947 6173 -1 929 248 84 69 chr17 43050721 43051659 -46452894 + L1ME3A LINE L1 4778 5808 -345 2299 110 3 0 chr17 43051659 43051968 -46452585 + AluSq SINE Alu 1 310 -3 929 248 84 69 chr17 43051968 43052106 -46452447 + L1ME3A LINE L1 5808 5942 -211 430 235 24 0 chr17 43052418 43052503 -46452050 - AluSc SINE Alu -221 88 2 206 103 0 0 chr17 43053104 43053133 -46451420 + L2 LINE L2 3024 3052 -220 534 164 77 10 chr17 43053155 43053259 -46451294 + MER81 DNA DNA 2 112 -2 521 62 0 0 chr17 43053439 43053512 -46451041 - L1MA3 LINE L1 -263 5893 5821 1972 106 16 74 chr17 43053693 43053873 -46450680 - AluSx SINE Alu -17 295 139 2329 89 0 3 chr17 43053873 43054165 -46450388 - AluSp SINE Alu -22 291 1 1972 106 16 74 chr17 43054165 43054295 -46450258 - AluSx SINE Alu -173 139 3 359 257 46 18 chr17 43054798 43054907 -46449646 - MIR3 SINE MIR -4 204 93 1954 149 0 0 chr17 43055573 43055895 -46448658 + AluJb SINE Alu 1 322 0 1427 178 70 28 chr17 43056705 43056992 -46447561 + AluJo SINE Alu 1 299 -13 2335 103 0 0 chr17 43058114 43058414 -46446139 + AluSq SINE Alu 1 300 -13 1205 135 140 33 chr17 43058601 43059005 -46445548 + LTR45B LTR ERV1 5 528 -3 2062 132 14 0 chr17 43059135 43059423 -46445130 - AluSq SINE Alu -21 292 1 195 129 0 0 chr17 43059862 43059893 -46444660 + (TA)n Simple_repeat Simple_repeat 2 32 0 659 277 107 13 chr17 43060161 43060385 -46444168 + MIR SINE MIR 16 260 -2 393 39 0 0 chr17 43060762 43060813 -46443740 + (TG)n Simple_repeat Simple_repeat 2 52 0 1377 172 114 0 chr17 43060978 43061268 -46443285 - MER33 DNA MER1_type -1 323 1 533 229 85 0 chr17 43061826 43061944 -46442609 + MER45A DNA AcHobo 51 178 0 210 178 14 41 chr17 43062032 43062105 -46442448 + (TATG)n Simple_repeat Simple_repeat 4 74 0 2175 107 28 0 chr17 43062139 43062429 -46442124 + AluSg SINE Alu 1 298 -12 317 287 92 52 chr17 43063038 43063212 -46441341 + MER5A DNA MER1_type 9 189 0 783 232 39 33 chr17 43063334 43063515 -46441038 + MER5A DNA MER1_type 5 186 -3 527 234 70 6 chr17 43064278 43064436 -46440117 - L2 LINE L2 0 3313 3146 2552 52 0 10 chr17 43064559 43064869 -46439684 - AluY SINE Alu -4 307 1 473 204 0 0 chr17 43064871 43064969 -46439584 + HAL1 LINE L1 2284 2381 -126 195 100 0 0 chr17 43065039 43065069 -46439484 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 250 341 67 24 chr17 43065096 43065304 -46439249 - L2 LINE L2 -36 3236 3020 193 260 154 44 chr17 43065338 43065565 -46438988 - L2 LINE L2 -368 2946 2695 261 0 0 0 chr17 43065687 43065716 -46438837 + (CA)n Simple_repeat Simple_repeat 1 29 0 4929 85 3 6 chr17 43066203 43066837 -46437716 - L1PA7 LINE L1 -4 6150 5519 683 163 20 20 chr17 43067778 43068017 -46436536 + CT-rich Low_complexity Low_complexity 1 239 0 2474 80 0 3 chr17 43068034 43068346 -46436207 - AluY SINE Alu 0 311 1 240 143 0 24 chr17 43068400 43068442 -46436111 - MER5B DNA MER1_type 0 178 138 187 241 0 74 chr17 43070423 43070477 -46434076 - L3b LINE CR1 -235 1348 1299 695 225 33 0 chr17 43070490 43070641 -46433912 - MER58B DNA MER1_type -16 325 170 2175 93 0 0 chr17 43071752 43072058 -46432495 + AluSc SINE Alu 1 306 0 2537 65 0 0 chr17 43073740 43074050 -46430503 - AluY SINE Alu -1 310 1 497 291 152 0 chr17 43074575 43074726 -46429827 + MER5A DNA MER1_type 16 189 0 496 303 45 7 chr17 43075436 43075591 -46428962 + MIR SINE MIR 48 208 -54 989 211 82 82 chr17 43076794 43077183 -46427370 - MLT1G LTR MaLR 0 590 202 233 231 31 15 chr17 43077233 43077298 -46427255 - MLT1I LTR MaLR -274 135 70 25 65 0 0 chr17 43077401 43077447 -46427106 + AT_rich Low_complexity Low_complexity 1 46 0 2048 145 0 13 chr17 43077611 43077922 -46426631 + AluJb SINE Alu 1 307 -5 252 363 11 0 chr17 43078256 43078347 -46426206 + MIR3 SINE MIR 108 199 -9 1489 209 14 0 chr17 43078722 43079019 -46425534 - AluJo SINE Alu -11 301 1 753 201 11 69 chr17 43079250 43079340 -46425213 - MER5B DNA MER1_type 0 178 103 2067 125 13 26 chr17 43079340 43079653 -46424900 - AluSx SINE Alu -3 309 1 753 201 11 69 chr17 43079653 43079751 -46424802 - MER5B DNA MER1_type -75 103 1 2088 123 0 3 chr17 43080990 43081283 -46423270 + AluSx SINE Alu 1 292 -20 315 104 0 0 chr17 43081450 43081498 -46423055 + (T)n Simple_repeat Simple_repeat 1 48 0 494 309 37 0 chr17 43081703 43081865 -46422688 + MIR3 SINE MIR 37 204 -4 2601 83 16 43 chr17 43082049 43082210 -46422343 + THE1B LTR MaLR 1 165 -199 2422 91 3 0 chr17 43082210 43082517 -46422036 - AluSq SINE Alu -5 308 1 2601 83 16 43 chr17 43082517 43082727 -46421826 + THE1B LTR MaLR 165 362 -2 232 271 17 0 chr17 43083976 43084035 -46420518 + L3 LINE CR1 1156 1215 -362 337 212 16 153 chr17 43084423 43084612 -46419941 + MER103 DNA DNA 3 165 -1 784 173 47 58 chr17 43086418 43086609 -46417944 - MER53 DNA DNA 0 189 1 1099 288 205 9 chr17 43086786 43087313 -46417240 + L2 LINE L2 1179 1808 -1506 751 302 89 11 chr17 43087404 43087765 -46416788 + L2 LINE L2 2818 3206 -107 685 197 42 42 chr17 43088415 43088608 -46415945 + MIR SINE MIR 69 261 -1 1700 116 0 4 chr17 43089336 43089569 -46414984 + AluSg/x SINE Alu 78 309 -3 625 241 98 48 chr17 43090809 43090999 -46413554 - L1MC5 LINE L1 -69 7892 7713 2289 89 0 0 chr17 43090999 43091319 -46413234 + AluSc SINE Alu 1 320 0 625 241 98 48 chr17 43091319 43091484 -46413069 - L1MC5 LINE L1 -248 7713 7518 2533 63 0 3 chr17 43091522 43091825 -46412728 - AluSc SINE Alu -7 302 1 243 50 150 0 chr17 43092409 43092449 -46412104 + MADE1 DNA Mariner 1 46 -34 301 341 40 58 chr17 43092989 43093162 -46411391 + MIR3 SINE MIR 30 199 -9 406 301 59 7 chr17 43093369 43093522 -46411031 + MIR SINE MIR 32 192 -70 242 170 19 19 chr17 43094720 43094773 -46409780 + MIR3 SINE MIR 108 160 -48 331 259 71 0 chr17 43095000 43095085 -46409468 + MIR SINE MIR 117 207 -55 241 283 98 22 chr17 43095201 43095293 -46409260 + MIR SINE MIR 33 131 -131 282 156 44 0 chr17 43095321 43095366 -46409187 - MER3 DNA MER1_type -162 47 1 211 250 0 23 chr17 43095383 43095427 -46409126 + L2 LINE L2 3215 3257 -15 185 132 0 38 chr17 43097533 43097586 -46406967 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 283 220 212 17 chr17 43098190 43098308 -46406245 - MIR3 SINE MIR -13 195 55 202 286 76 48 chr17 43098403 43098508 -46406045 - MIR SINE MIR -51 211 104 215 270 261 9 chr17 43098579 43098694 -46405859 + L2 LINE L2 2943 3086 -186 2402 90 0 3 chr17 43099795 43100095 -46404458 - AluSg SINE Alu -11 299 1 2327 94 0 3 chr17 43100108 43100406 -46404147 - AluSg SINE Alu -13 297 1 420 258 171 24 chr17 43100498 43100750 -46403803 - HAL1b LINE L1 -8 1340 1052 319 113 99 0 chr17 43101515 43101586 -46402967 + L1P LINE L1 5270 5347 -814 22 25 0 25 chr17 43101980 43101999 -46402554 + AT_rich Low_complexity Low_complexity 1 19 -20 1978 124 0 24 chr17 43101999 43102297 -46402256 + AluSq SINE Alu 1 291 -22 22 25 0 25 chr17 43102297 43102317 -46402236 + AT_rich Low_complexity Low_complexity 19 39 0 1465 203 7 17 chr17 43102317 43102608 -46401945 - AluJo SINE Alu -24 288 1 203 218 18 0 chr17 43102695 43102750 -46401803 + CT-rich Low_complexity Low_complexity 3 58 0 956 114 5 27 chr17 43102750 43102934 -46401619 + (TCC)n Simple_repeat Simple_repeat 1 180 0 708 188 0 17 chr17 43102937 43103118 -46401435 + CT-rich Low_complexity Low_complexity 3 180 0 835 167 0 11 chr17 43103146 43103424 -46401129 + CT-rich Low_complexity Low_complexity 1 274 0 266 177 16 0 chr17 43103741 43103803 -46400750 - L1PB1 LINE L1 -2 6149 6087 5360 88 23 30 chr17 43103822 43104617 -46399936 - L1PA10 LINE L1 0 6168 5380 831 86 17 0 chr17 43104610 43104726 -46399827 - L1PB1 LINE L1 -43 6108 5991 * 1849 149 58 0 chr17 43105769 43106064 -46398489 - AluSx SINE Alu 0 312 1 248 229 0 0 chr17 43106131 43106179 -46398374 - L2 LINE L2 -1 3312 3265 * 356 373 72 4 chr17 43106168 43106447 -46398106 - L2 LINE L2 -431 2883 2586 318 282 51 51 chr17 43106795 43106912 -46397641 - MIR SINE MIR -67 141 25 324 250 111 58 chr17 43107223 43107395 -46397158 + MIR SINE MIR 28 208 -54 263 311 189 7 chr17 43107867 43108015 -46396538 + MIR SINE MIR 30 204 -58 231 103 0 0 chr17 43108054 43108093 -46396460 + (TG)n Simple_repeat Simple_repeat 2 40 0 590 238 224 5 chr17 43108535 43108749 -46395804 + MIR SINE MIR 2 262 0 1479 219 52 93 chr17 43109009 43109214 -46395339 + MLT1D LTR MaLR 1 213 -292 2177 81 0 81 chr17 43109214 43109332 -46395221 + AluSg SINE Alu 1 127 -183 201 74 0 0 chr17 43109332 43109359 -46395194 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2177 81 0 81 chr17 43109359 43109563 -46394990 + AluSg SINE Alu 127 297 -13 1479 219 52 93 chr17 43109563 43109873 -46394680 + MLT1D LTR MaLR 213 495 -10 3207 116 4 19 chr17 43109945 43110410 -46394143 - LTR22A LTR ERVK 0 458 1 21 36 0 0 chr17 43110568 43110596 -46393957 + AT_rich Low_complexity Low_complexity 1 28 0 2243 103 0 32 chr17 43111177 43111488 -46393065 + AluSp SINE Alu 5 305 -8 632 295 43 9 chr17 43112470 43112671 -46391882 + MIR SINE MIR 32 235 -27 867 214 77 9 chr17 43113308 43113528 -46391025 - MIR SINE MIR -26 236 2 212 130 43 0 chr17 43114091 43114137 -46390416 + T-rich Low_complexity Low_complexity 1 48 0 389 108 0 15 chr17 43114261 43114326 -46390227 + (GA)n Simple_repeat Simple_repeat 2 65 0 508 235 9 0 chr17 43115721 43115836 -46388717 + MIR SINE MIR 82 197 -65 389 311 51 17 chr17 43116018 43116195 -46388358 - MER5A DNA MER1_type 0 189 7 210 347 53 21 chr17 43117281 43117376 -46387177 - MIR3 SINE MIR -107 101 4 403 311 94 17 chr17 43117833 43118013 -46386540 - MIR SINE MIR -46 216 23 337 298 40 16 chr17 43119624 43119748 -46384805 + MIR SINE MIR 17 143 -65 22 35 0 0 chr17 43120270 43120299 -46384254 + AT_rich Low_complexity Low_complexity 1 29 0 223 286 0 26 chr17 43121198 43121275 -46383278 + CT-rich Low_complexity Low_complexity 3 77 0 2324 93 0 3 chr17 43121365 43121665 -46382888 + AluSg1 SINE Alu 1 299 -10 242 309 37 0 chr17 43121753 43121834 -46382719 + MIR3 SINE MIR 121 204 -4 406 237 11 11 chr17 43121875 43121968 -46382585 - MIR SINE MIR -109 153 61 281 307 40 30 chr17 43122057 43122158 -46382395 + MIR SINE MIR 43 144 -118 199 267 163 30 chr17 43122183 43122318 -46382235 + MIR SINE MIR 90 242 -20 596 229 78 13 chr17 43122388 43122541 -46382012 - MER103 DNA DNA -3 163 1 2310 124 33 16 chr17 43123686 43124050 -46380503 + THE1C LTR MaLR 6 375 0 370 277 27 82 chr17 43124574 43124758 -46379795 + MIR SINE MIR 21 194 -68 1968 106 3 14 chr17 43125297 43125430 -46379123 + AluSc SINE Alu 1 134 -178 2526 48 0 26 chr17 43125430 43125742 -46378811 + AluY SINE Alu 1 304 -7 1968 106 3 14 chr17 43125742 43125923 -46378630 + AluSc SINE Alu 134 312 0 542 224 32 24 chr17 43125958 43126083 -46378470 + L2 LINE L2 3187 3312 -1 1624 190 30 0 chr17 43126396 43126573 -46377980 - AluJb SINE Alu -8 304 113 294 29 0 0 chr17 43126573 43126608 -46377945 + (TG)n Simple_repeat Simple_repeat 2 36 0 1624 190 30 0 chr17 43126608 43126725 -46377828 - AluJb SINE Alu -199 113 1 277 56 0 56 chr17 43128025 43128079 -46376474 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 486 167 39 20 chr17 43128327 43128429 -46376124 - MLT1D LTR MaLR -139 366 263 7253 60 10 5 chr17 43128458 43129389 -46375164 - L1PA7 LINE L1 -14 6140 5206 364 260 14 0 chr17 43129389 43129462 -46375091 + FLAM SINE Alu 44 117 -16 188 0 0 69 chr17 43129462 43129491 -46375062 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 589 210 77 60 chr17 43129806 43130054 -46374499 + L1MC/D LINE L1 5298 5549 -2259 1400 249 38 56 chr17 43130067 43130568 -46373985 + L1ME2 LINE L1 4737 5228 -918 1948 153 15 21 chr17 43130642 43130976 -46373577 - MER7A DNA MER2_type -15 331 2 243 0 0 0 chr17 43131038 43131065 -46373488 + (TC)n Simple_repeat Simple_repeat 2 28 0 1773 227 24 78 chr17 43131073 43131596 -46372957 + L1ME2 LINE L1 5609 6100 -64 1755 177 7 7 chr17 43131596 43131895 -46372658 - AluJo SINE Alu -13 299 1 1773 227 24 78 chr17 43131895 43131949 -46372604 + L1ME2 LINE L1 6100 6155 -9 229 286 81 27 chr17 43132010 43132195 -46372358 + L1M4 LINE L1 4962 5156 -990 227 254 0 30 chr17 43133122 43133189 -46371364 + MLT1I LTR MaLR 31 95 -314 33 66 0 0 chr17 43133536 43133597 -46370956 + AT_rich Low_complexity Low_complexity 1 61 0 2414 87 0 0 chr17 43133617 43133915 -46370638 - AluSg SINE Alu -12 298 1 621 190 9 0 chr17 43133997 43134113 -46370440 - L1MD2 LINE L1 -388 5971 5855 378 188 0 0 chr17 43134117 43134181 -46370372 - L1MD2 LINE L1 -608 5751 5688 3331 181 51 19 chr17 43134183 43134986 -46369567 - L1MDa LINE L1 -3856 2684 1859 786 177 14 17 chr17 43134986 43135276 -46369277 + CT-rich Low_complexity Low_complexity 1 289 0 201 111 0 0 chr17 43135276 43135303 -46369250 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 2144 92 28 3 chr17 43135303 43135587 -46368966 - AluSc SINE Alu -18 291 1 6868 217 75 32 chr17 43135596 43136261 -46368292 - L1MDa LINE L1 -4670 1870 1235 1119 83 45 0 chr17 43136261 43136418 -46368135 + L1MA2 LINE L1 6136 6299 -5 6868 217 75 32 chr17 43136418 43137294 -46367259 - L1MDa LINE L1 -5305 1235 239 189 0 0 0 chr17 43137294 43137315 -46367238 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6868 217 75 32 chr17 43137315 43137563 -46366990 - L1MDa LINE L1 -6301 239 3 289 223 208 71 chr17 43137588 43137660 -46366893 + L1ME4a LINE L1 5736 5797 -324 2190 121 0 3 chr17 43137660 43137967 -46366586 + AluY SINE Alu 1 306 -5 289 223 208 71 chr17 43137967 43138230 -46366323 + L1ME4a LINE L1 5797 6117 -4 734 261 9 55 chr17 43139573 43139749 -46364804 + MIR SINE MIR 23 189 -73 2229 75 50 0 chr17 43139749 43140031 -46364522 + AluY SINE Alu 1 296 -15 734 261 9 55 chr17 43140031 43140072 -46364481 + MIR SINE MIR 189 230 -32 2194 129 3 0 chr17 43140237 43140563 -46363990 + L1MA4A LINE L1 5975 6301 -2 460 298 75 6 chr17 43140576 43140737 -46363816 + MIR SINE MIR 21 192 -70 486 265 169 27 chr17 43141757 43141976 -46362577 + MIR SINE MIR 13 262 0 2231 102 0 0 chr17 43142382 43142692 -46361861 - AluSg SINE Alu 0 310 1 180 0 0 0 chr17 43143163 43143183 -46361370 + (TG)n Simple_repeat Simple_repeat 1 20 0 2218 113 0 13 chr17 43143237 43143546 -46361007 + AluSq SINE Alu 1 305 -8 350 349 46 7 chr17 43144062 43144214 -46360339 - MIR3 SINE MIR -31 177 20 189 0 0 0 chr17 43146107 43146128 -46358425 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 395 91 0 0 chr17 43146634 43146689 -46357864 + MER83 LTR ERV1 1 55 -393 567 32 0 0 chr17 43146689 43146752 -46357801 + L1PA2 LINE L1 6051 6113 -42 2493 129 34 0 chr17 43146781 43147168 -46357385 + MER83 LTR ERV1 49 448 0 203 357 60 35 chr17 43147385 43147586 -46356967 + L2 LINE L2 2777 3028 -244 1015 154 35 100 chr17 43147682 43147941 -46356612 - LTR42 LTR ERVL -253 242 1 2774 229 70 71 chr17 43147963 43148134 -46356419 - L1M4 LINE L1 -2346 4821 4651 1932 168 44 19 chr17 43148134 43148497 -46356056 + THE1C LTR MaLR 3 374 -1 2774 229 70 71 chr17 43148497 43148663 -46355890 - L1M4 LINE L1 -2516 4651 4486 1843 161 7 0 chr17 43148663 43148943 -46355610 + AluSx SINE Alu 3 284 -28 486 49 0 0 chr17 43148943 43149004 -46355549 + (CA)n Simple_repeat Simple_repeat 2 62 0 2774 229 70 71 chr17 43149004 43149295 -46355258 - L1M4 LINE L1 -2680 4487 4197 1064 104 20 45 chr17 43149295 43149496 -46355057 + L1MA7 LINE L1 6091 6286 -5 2774 229 70 71 chr17 43149496 43151044 -46353509 - L1M4 LINE L1 -2970 4197 2691 3228 182 10 12 chr17 43151054 43151725 -46352828 - L1MB3 LINE L1 -1 6182 5513 273 102 51 0 chr17 43151739 43151798 -46352755 + (TA)n Simple_repeat Simple_repeat 1 62 0 2245 125 0 0 chr17 43151803 43152108 -46352445 - AluSx SINE Alu -7 305 1 261 0 0 0 chr17 43152121 43152150 -46352403 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 931 146 10 30 chr17 43152150 43152341 -46352212 - L1MB3 LINE L1 -705 5475 5287 476 276 81 33 chr17 43152362 43152657 -46351896 - L1M4 LINE L1 -4671 2677 2397 180 0 0 0 chr17 43152657 43152677 -46351876 + (TG)n Simple_repeat Simple_repeat 2 21 0 476 276 81 33 chr17 43152677 43152899 -46351654 - L1M4 LINE L1 -4951 2397 1975 327 280 258 27 chr17 43154375 43154600 -46349953 - L1M4 LINE L1 -5578 1590 1314 33 25 0 0 chr17 43155298 43155338 -46349215 + AT_rich Low_complexity Low_complexity 1 40 0 402 256 58 97 chr17 43155416 43155798 -46348755 - L1ME LINE L1 -364 5757 5391 248 238 50 12 chr17 43155768 43155848 -46348705 - L1P LINE L1 -728 5423 5341 * 235 348 43 49 chr17 43156341 43156525 -46348028 + MIR SINE MIR 14 196 -66 198 0 0 0 chr17 43156722 43156744 -46347809 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 624 287 0 0 chr17 43156953 43157075 -46347478 - L2 LINE L2 -8 3264 3143 218 279 127 0 chr17 43157466 43157545 -46347008 - MIR3 SINE MIR -31 177 89 219 114 0 0 chr17 43157758 43157793 -46346760 + (CA)n Simple_repeat Simple_repeat 2 36 0 247 344 42 115 chr17 43157983 43158480 -46346073 + L2 LINE L2 2812 3272 0 196 191 56 0 chr17 43158751 43158840 -46345713 + (TA)n Simple_repeat Simple_repeat 1 94 0 303 248 157 86 chr17 43160082 43160422 -46344131 - L1M4 LINE L1 -5578 1590 1081 21 0 0 0 chr17 43160984 43161005 -46343548 + AT_rich Low_complexity Low_complexity 1 21 0 2632 108 16 0 chr17 43161772 43162160 -46342393 + L1PA13 LINE L1 5770 6163 0 3209 131 111 7 chr17 43162233 43162413 -46342140 - MER51D LTR ERV1 0 657 497 312 27 0 0 chr17 43162413 43162450 -46342103 + (TG)n Simple_repeat Simple_repeat 2 38 0 3209 131 111 7 chr17 43162450 43162742 -46341811 - MER51D LTR ERV1 -160 497 108 1686 142 11 15 chr17 43162742 43163010 -46341543 - AluSq SINE Alu -46 267 1 3209 131 111 7 chr17 43163010 43163131 -46341422 - MER51D LTR ERV1 -549 108 1 725 138 36 0 chr17 43163381 43163519 -46341034 + L1MA8 LINE L1 6051 6193 -98 505 360 32 78 chr17 43163556 43163928 -46340625 + L2 LINE L2 2910 3264 -8 2181 97 3 7 chr17 43164056 43164354 -46340199 - AluSp SINE Alu -16 297 1 635 59 12 0 chr17 43165591 43165676 -46338877 - THE1B LTR MaLR 0 364 279 353 158 0 0 chr17 43165678 43165735 -46338818 - AluS SINE Alu -251 57 1 338 314 48 0 chr17 43166202 43166326 -46338227 + MIR SINE MIR 7 136 -126 2347 164 58 11 chr17 43166350 43166814 -46337739 - MER66B LTR ERV1 0 486 1 592 304 6 6 chr17 43166940 43167111 -46337442 - MIR3 SINE MIR -6 202 32 2269 141 15 32 chr17 43167426 43167837 -46336716 + L1PB3 LINE L1 5737 6140 -14 261 0 0 0 chr17 43167840 43167869 -46336684 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr17 43168183 43168205 -46336348 + (TA)n Simple_repeat Simple_repeat 1 22 0 203 257 71 43 chr17 43168746 43168816 -46335737 + L2 LINE L2 3238 3309 -4 360 321 37 0 chr17 43170089 43170198 -46334355 + L3 LINE CR1 1287 1399 -178 427 236 157 0 chr17 43170445 43170585 -46333968 + MER103 DNA DNA 2 163 -3 1436 77 106 0 chr17 43170670 43170878 -46333675 - MER30 DNA MER1_type 0 230 1 293 367 92 81 chr17 43171335 43171692 -46332861 - L2 LINE L2 -18 3254 2894 835 224 94 31 chr17 43171904 43172127 -46332426 - MIR SINE MIR -23 239 3 433 302 34 56 chr17 43172539 43172718 -46331835 - MIR SINE MIR -17 245 71 248 309 125 37 chr17 43172833 43172969 -46331584 - L2 LINE L2 -37 3235 3088 256 295 21 11 chr17 43172989 43173084 -46331469 - L2 LINE L2 -425 2889 2794 404 320 169 8 chr17 43173174 43173530 -46331023 - L2 LINE L2 -415 2899 2487 202 171 98 0 chr17 43174631 43174672 -46329881 - L2 LINE L2 -7 3265 3221 964 282 4 8 chr17 43175035 43175269 -46329284 - MIR SINE MIR -21 241 9 223 321 0 37 chr17 43175336 43175417 -46329136 - L2 LINE L2 -9 3263 3186 220 307 37 74 chr17 43175431 43175594 -46328959 - L2 LINE L2 -245 3027 2871 333 287 39 8 chr17 43175717 43175846 -46328707 + MIR SINE MIR 118 250 -12 189 209 0 143 chr17 43176492 43176583 -46327970 - L2 LINE L2 -1057 2257 2180 526 249 98 39 chr17 43176749 43176977 -46327576 - MIR SINE MIR 0 262 15 1787 158 32 50 chr17 43177038 43177380 -46327173 - MER1B DNA MER1_type -1 336 1 547 261 157 24 chr17 43178923 43179260 -46325293 - LTR50 LTR ERVL -331 464 83 321 305 163 54 chr17 43179415 43179606 -46324947 + MIR SINE MIR 25 241 -21 3220 104 88 8 chr17 43179606 43180094 -46324459 - MER1A DNA MER1_type 0 527 1 321 305 163 54 chr17 43180094 43180105 -46324448 + MIR SINE MIR 241 249 -13 961 283 64 12 chr17 43180105 43180434 -46324119 - ERVL LTR ERVL -2283 3481 3136 1235 101 18 0 chr17 43180448 43180616 -46323937 - AluSg/x SINE Alu -2 310 140 2838 290 52 20 chr17 43180618 43181730 -46322823 - ERVL LTR ERVL -2618 3146 1999 232 196 59 0 chr17 43181856 43181907 -46322646 + LTR50 LTR ERVL 740 793 -2 698 221 11 111 chr17 43181983 43182245 -46322308 + MLT1E1 LTR MaLR 68 303 -323 850 229 63 5 chr17 43182251 43182474 -46322079 + MLT1E1 LTR MaLR 419 654 0 266 352 21 0 chr17 43182486 43182631 -46321922 - ERVL LTR ERVL -4051 1713 1566 1137 181 28 23 chr17 43182634 43182849 -46321704 + MER8 DNA MER2_type 1 216 -23 4940 138 32 5 chr17 43183402 43184247 -46320306 - L1MC1 LINE L1 0 6333 5466 578 266 101 4 chr17 43185112 43185377 -46319176 - LTR50 LTR ERVL -2 793 404 389 262 79 0 chr17 43185375 43185501 -46319052 - LTR50 LTR ERVL -659 136 1 * 380 367 92 36 chr17 43185605 43185801 -46318752 + MIR SINE MIR 25 231 -31 202 333 8 17 chr17 43185871 43185988 -46318565 + CT-rich Low_complexity Low_complexity 3 118 0 1766 128 0 49 chr17 43186207 43186473 -46318080 - AluSx SINE Alu -59 253 1 2222 102 3 14 chr17 43188857 43189151 -46315402 - AluY SINE Alu -19 292 2 273 38 0 146 chr17 43191529 43191605 -46312948 - L1MB3 LINE L1 -2 6181 6111 3537 146 32 27 chr17 43191640 43192497 -46312056 + L1MA8 LINE L1 4932 5799 -513 252 59 0 0 chr17 43192497 43192531 -46312022 + (CA)n Simple_repeat Simple_repeat 2 35 0 3537 146 32 27 chr17 43192531 43192671 -46311882 + L1MA8 LINE L1 5799 5937 -375 940 57 0 0 chr17 43192671 43192788 -46311765 + L1PA5 LINE L1 6032 6154 0 1871 127 32 14 chr17 43192801 43193148 -46311405 + L1MA8 LINE L1 5937 6289 -2 1807 216 26 15 chr17 43193165 43193605 -46310948 - L1M4 LINE L1 -1295 4851 4403 2060 143 0 0 chr17 43193605 43193922 -46310631 - AluSx SINE Alu 0 312 1 1807 216 26 15 chr17 43193922 43194009 -46310544 - L1M4 LINE L1 -1743 4403 4318 964 122 0 0 chr17 43194009 43194132 -46310421 - AluSg SINE Alu -187 123 1 310 328 141 71 chr17 43194828 43195352 -46309201 - L1M2 LINE L1 -5842 1007 447 667 292 47 21 chr17 43195891 43196127 -46308426 - MIR SINE MIR -10 252 11 1187 88 9 13 chr17 43196133 43196398 -46308155 + (TTTC)n Simple_repeat Simple_repeat 1 443 0 482 207 0 0 chr17 43197487 43197598 -46306955 - L1MA7 LINE L1 -407 5884 5774 296 326 109 49 chr17 43198182 43198366 -46306187 + MER91A DNA MER1_type 2 196 0 914 202 14 9 chr17 43198376 43198589 -46305964 - L1MB5 LINE L1 0 6174 5961 1933 145 30 0 chr17 43198918 43199221 -46305332 - AluSx SINE Alu 0 312 1 256 274 12 12 chr17 43199232 43199316 -46305237 + MER103 DNA DNA 52 135 -31 492 325 37 6 chr17 43199414 43199577 -46304976 - MIR3 SINE MIR -27 181 14 2839 191 41 128 chr17 43199624 43200493 -46304060 - MER21A LTR ERV1 -3 922 130 435 165 126 39 chr17 43200507 43200634 -46303919 - MER21A LTR ERV1 -767 164 27 199 299 39 13 chr17 43203258 43203335 -46301218 - MIR3 SINE MIR -9 199 121 238 370 25 17 chr17 43203601 43203720 -46300833 - MIR3 SINE MIR -85 123 4 6584 135 8 32 chr17 43204689 43204987 -46299566 + L1MA6 LINE L1 4954 5258 -1042 8213 21 0 0 chr17 43204987 43205915 -46298638 - L1PA5 LINE L1 -3 6151 5222 6584 135 8 32 chr17 43205915 43206997 -46297556 + L1MA6 LINE L1 5258 6290 -10 29 28 0 0 chr17 43206997 43207033 -46297520 + AT_rich Low_complexity Low_complexity 1 36 0 353 278 183 75 chr17 43207310 43207814 -46296739 - L1M2 LINE L1 -5848 1001 444 1870 141 7 3 chr17 43208581 43208872 -46295681 + AluSx SINE Alu 1 292 -20 267 287 56 35 chr17 43208969 43209112 -46295441 + MARNA DNA Mariner 97 242 -344 327 195 403 39 chr17 43209868 43210022 -46294531 + MIR SINE MIR 25 234 -28 281 115 0 19 chr17 43210038 43210090 -46294463 + (TA)n Simple_repeat Simple_repeat 1 51 0 317 191 21 64 chr17 43210133 43210227 -46294326 + L1MC4 LINE L1 6614 6703 -1339 9518 47 2 1 chr17 43210229 43211299 -46293254 + MER11C LTR ERVK 1 1071 0 589 120 38 25 chr17 43211299 43211540 -46293013 + (TATAA)n Simple_repeat Simple_repeat 1 244 0 514 105 47 23 chr17 43211567 43211738 -46292815 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 222 33 98 33 chr17 43211733 43211825 -46292728 + (TA)n Simple_repeat Simple_repeat 2 99 0 * 462 80 42 51 chr17 43211838 43212081 -46292472 + (TA)n Simple_repeat Simple_repeat 1 241 0 5792 117 9 24 chr17 43212552 43214374 -46290179 - L1PA16 LINE L1 0 6166 4413 235 282 12 35 chr17 43214584 43214669 -46289884 + MIR3 SINE MIR 124 206 -2 336 265 167 94 chr17 43215211 43215773 -46288780 - L1M2 LINE L1 -5744 1105 444 513 281 120 5 chr17 43216420 43216612 -46287941 - MIR SINE MIR -1 261 48 585 111 0 12 chr17 43217247 43217328 -46287225 + MADE1 DNA Mariner 1 80 0 275 286 38 38 chr17 43217895 43218000 -46286553 - L2 LINE L2 0 3313 3209 4415 102 5 41 chr17 43218000 43218506 -46286047 + L1PA15 LINE L1 5546 6069 -96 194 0 0 37 chr17 43218506 43218533 -46286020 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1991 144 0 0 chr17 43218533 43218818 -46285735 - AluSx SINE Alu -27 285 1 4415 102 5 41 chr17 43218818 43218945 -46285608 + L1PA15 LINE L1 6067 6157 -8 23 0 0 0 chr17 43219782 43219805 -46284748 + AT_rich Low_complexity Low_complexity 1 23 0 337 295 159 80 chr17 43220096 43220611 -46283942 - L1M2 LINE L1 -5850 999 444 1877 247 43 9 chr17 43222238 43222700 -46281853 + LTR65 LTR ERV1 166 643 -26 286 310 65 0 chr17 43223067 43223187 -46281366 + MIR SINE MIR 15 145 -63 333 299 48 34 chr17 43223884 43224031 -46280522 - MIR SINE MIR -15 247 99 324 161 0 0 chr17 43224283 43224345 -46280208 + (TG)n Simple_repeat Simple_repeat 1 62 0 529 264 75 29 chr17 43225093 43225267 -46279286 - MER5A DNA MER1_type -1 188 7 222 354 127 6 chr17 43225357 43225515 -46279038 + L2 LINE L2 3096 3272 0 339 260 179 91 chr17 43226004 43226411 -46278142 - L1M2 LINE L1 -5963 886 444 268 299 173 8 chr17 43227194 43227321 -46277232 - MIR3 SINE MIR -29 179 32 446 157 0 24 chr17 43227403 43227486 -46277067 + L1PB4 LINE L1 6073 6153 -3 2185 197 57 16 chr17 43227586 43228027 -46276526 - LTR32 LTR ERVL 0 471 13 821 230 29 29 chr17 43228027 43228231 -46276322 - HERVL32 LTR ERVL 0 3418 3215 339 355 4 4 chr17 43228301 43228515 -46276038 - HERVL66 LTR ERVL -236 4093 3977 662 300 18 0 chr17 43228577 43228800 -46275753 - PRIMA41-int LTR ERV1 -710 7046 6820 2268 107 3 7 chr17 43229386 43229696 -46274857 + AluSq SINE Alu 1 309 -4 348 304 105 33 chr17 43230194 43230375 -46274178 - PRIMA41-int LTR ERV1 -406 7350 7157 767 231 6 0 chr17 43230739 43230895 -46273658 - HERVL66 LTR ERVL -1889 1529 1373 255 303 10 7 chr17 43231222 43231329 -46273224 - MLT1H LTR MaLR 0 583 478 778 191 29 0 chr17 43231389 43231562 -46272991 + MER53 DNA DNA 1 178 -11 1321 114 0 0 chr17 43231860 43232035 -46272518 + AluSq SINE Alu 5 179 -134 2116 134 3 0 chr17 43233556 43233855 -46270698 - AluSp SINE Alu -13 300 1 1708 176 0 27 chr17 43234982 43235283 -46269270 - AluJo SINE Alu -15 297 5 265 303 106 21 chr17 43235459 43235601 -46268952 - HAL1b LINE L1 -686 662 509 780 195 0 0 chr17 43235608 43235736 -46268817 - FRAM SINE Alu -33 143 16 436 278 134 95 chr17 43236272 43237132 -46267421 + HAL1 LINE L1 371 1263 -1244 689 223 0 0 chr17 43237152 43237273 -46267280 + FLAM_A SINE Alu 10 130 -12 368 194 0 0 chr17 43237276 43237338 -46267215 + polypurine Low_complexity Low_complexity 3 64 0 936 140 11 6 chr17 43237339 43237517 -46267036 + GA-rich Low_complexity Low_complexity 2 180 0 2184 123 0 0 chr17 43237634 43237927 -46266626 + AluSx SINE Alu 4 296 -16 236 328 67 0 chr17 43238149 43238268 -46266285 + L2 LINE L2 3132 3258 -14 532 219 144 0 chr17 43238314 43238460 -46266093 + MER91A DNA MER1_type 30 196 0 1113 171 0 0 chr17 43238869 43239056 -46265497 - MER53 DNA DNA -2 187 1 1500 158 23 81 chr17 43239126 43239272 -46265281 - MER50 LTR ERV1 -23 711 558 2723 17 0 0 chr17 43239272 43239572 -46264981 + AluY SINE Alu 1 300 -11 1500 158 23 81 chr17 43239572 43239583 -46264970 - MER50 LTR ERV1 -176 558 548 1877 157 4 0 chr17 43239583 43239890 -46264663 + AluSx SINE Alu 1 308 0 1500 158 23 81 chr17 43239890 43240040 -46264513 - MER50 LTR ERV1 -186 548 420 2245 115 0 3 chr17 43240544 43240848 -46263705 - AluSq SINE Alu -10 303 1 933 81 6 12 chr17 43241374 43241534 -46263019 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 1366 96 30 5 chr17 43241534 43241733 -46262820 + MER4B-int LTR ERV1 945 1148 -5610 318 26 0 0 chr17 43241734 43241773 -46262780 + (TG)n Simple_repeat Simple_repeat 2 40 0 4328 81 74 10 chr17 43241795 43242483 -46262070 + MER4B-int LTR ERV1 1764 2495 -4103 1236 188 75 0 chr17 43242483 43242722 -46261831 - LTR8 LTR ERV1 -434 257 1 444 19 0 0 chr17 43242722 43242775 -46261778 + MER41-int LTR ERV1 2737 2789 -3809 * 2506 144 156 41 chr17 43242774 43243427 -46261126 + MER41-int LTR ERV1 2954 3681 -2917 * 4241 110 55 22 chr17 43243426 43244117 -46260436 + MER41-int LTR ERV1 3837 4550 -2048 8047 109 15 12 chr17 43244119 43245318 -46259235 + MER41-int LTR ERV1 3970 5172 -774 1767 220 68 103 chr17 43245318 43246280 -46258273 + LTR1B LTR ERV1 1 1020 0 4345 119 44 21 chr17 43246280 43247000 -46257553 + MER4A-int LTR ERV1 5862 6598 0 644 124 0 10 chr17 43247003 43247100 -46257453 + MER4A LTR ERV1 3 98 -566 1979 111 3 22 chr17 43247102 43247452 -46257101 + MER4A LTR ERV1 263 664 0 482 253 89 68 chr17 43247798 43248091 -46256462 + LTR43 LTR ERV1 180 478 -124 307 305 116 90 chr17 43249272 43249626 -46254927 - L1M2 LINE L1 -6047 802 440 1894 127 45 14 chr17 43250433 43250725 -46253828 - AluSc SINE Alu -8 301 1 230 305 26 95 chr17 43251028 43251218 -46253335 - MIR SINE MIR -13 249 73 304 349 102 40 chr17 43251266 43251590 -46252963 + L2 LINE L2 2928 3271 -1 607 280 16 26 chr17 43252003 43252192 -46252361 - LTR16C LTR ERVL 0 491 305 1658 42 0 0 chr17 43252360 43252549 -46252004 + L1PA5 LINE L1 5964 6152 -2 429 228 24 0 chr17 43253075 43253198 -46251355 - LTR16A LTR ERVL -5 445 320 316 82 0 118 chr17 43253205 43253290 -46251263 + (GGGGA)n Simple_repeat Simple_repeat 4 78 0 351 305 157 73 chr17 43253789 43254434 -46250119 + L1M2 LINE L1 497 1195 -5654 3590 57 4 0 chr17 43255545 43256005 -46248548 - L1P LINE L1 -832 5322 4854 7548 31 3 6 chr17 43256005 43256887 -46247666 + L1PA4 LINE L1 5293 6155 0 580 162 0 10 chr17 43257243 43257342 -46247211 + MER4A LTR ERV1 1 98 -566 1558 134 149 129 chr17 43257342 43257738 -46246815 + MER4A LTR ERV1 261 664 0 2149 114 260 106 chr17 43257751 43258336 -46246217 + MER4A-int LTR ERV1 12 686 -5912 995 229 53 12 chr17 43258482 43258726 -46245827 + MER4A-int LTR ERV1 1848 2101 -4230 1108 107 0 6 chr17 43258806 43258965 -46245588 + MER4B-int LTR ERV1 194 351 -6407 * 1534 112 0 14 chr17 43258962 43259176 -46245377 + MER4B-int LTR ERV1 637 847 -5911 4278 81 0 2 chr17 43259220 43259775 -46244778 + L1PA8A LINE L1 5547 6100 -31 793 44 18 9 chr17 43259795 43259909 -46244644 + (GAAA)n Simple_repeat Simple_repeat 4 118 0 1419 77 31 5 chr17 43259909 43260105 -46244448 + MER4B-int LTR ERV1 945 1145 -5613 369 0 0 0 chr17 43260105 43260146 -46244407 + (TG)n Simple_repeat Simple_repeat 2 42 0 4479 76 73 9 chr17 43260164 43260852 -46243701 + MER4B-int LTR ERV1 1764 2495 -4103 493 225 90 13 chr17 43260852 43261004 -46243549 - LTR8 LTR ERV1 -361 180 78 1923 160 117 32 chr17 43261004 43261511 -46243042 + MER41-int LTR ERV1 3149 3681 -2917 * 8209 106 40 17 chr17 43261510 43263412 -46241141 + MER41-int LTR ERV1 3837 5172 -774 1800 219 75 110 chr17 43263412 43264374 -46240179 + LTR1B LTR ERV1 1 1020 0 3877 137 49 25 chr17 43264375 43265089 -46239464 + MER4A-int LTR ERV1 5863 6593 -5 664 121 0 10 chr17 43265100 43265199 -46239354 + MER4A LTR ERV1 1 98 -566 1864 126 3 25 chr17 43265201 43265550 -46239003 + MER4A LTR ERV1 263 662 -2 458 254 90 66 chr17 43265898 43266257 -46238296 + LTR43 LTR ERV1 180 453 -59 301 334 141 38 chr17 43267460 43267780 -46236773 - L1M2 LINE L1 -6047 802 450 2062 139 0 3 chr17 43268625 43268928 -46235625 - AluSc SINE Alu -7 302 1 277 290 43 91 chr17 43269231 43269417 -46235136 - MIR SINE MIR -13 249 73 361 339 102 43 chr17 43269465 43269790 -46234763 + L2 LINE L2 2928 3271 -1 580 300 11 21 chr17 43270201 43270391 -46234162 - LTR16C LTR ERVL 0 491 304 1427 78 0 0 chr17 43270567 43270746 -46233807 + L1PA5 LINE L1 5975 6153 -1 26 50 0 0 chr17 43271081 43271121 -46233432 + AT_rich Low_complexity Low_complexity 1 40 0 501 198 11 0 chr17 43271262 43271353 -46233200 - LTR16A LTR ERVL -5 445 354 285 29 0 0 chr17 43271355 43271389 -46233164 + (GGGGA)n Simple_repeat Simple_repeat 4 37 0 348 304 105 33 chr17 43271659 43271840 -46232713 - PRIMA41-int LTR ERV1 -406 7350 7157 767 231 6 0 chr17 43272204 43272360 -46232193 - HERVL32 LTR ERVL -1889 1529 1373 255 303 10 7 chr17 43272687 43272794 -46231759 - MLT1H LTR MaLR 0 583 478 778 191 29 0 chr17 43272854 43273027 -46231526 + MER53 DNA DNA 1 178 -11 1321 114 0 0 chr17 43273325 43273500 -46231053 + AluSq SINE Alu 5 179 -134 2172 120 3 0 chr17 43275021 43275320 -46229233 - AluSp SINE Alu -13 300 1 1708 176 0 27 chr17 43276447 43276748 -46227805 - AluJo SINE Alu -15 297 5 265 303 106 21 chr17 43276924 43277066 -46227487 - HAL1b LINE L1 -686 662 509 780 195 0 0 chr17 43277073 43277201 -46227352 - FRAM SINE Alu -33 143 16 449 277 134 95 chr17 43277737 43278597 -46225956 + HAL1 LINE L1 371 1263 -1244 689 223 0 0 chr17 43278617 43278738 -46225815 + FLAM_A SINE Alu 10 130 -12 961 146 4 8 chr17 43278741 43278995 -46225558 + GA-rich Low_complexity Low_complexity 1 253 0 281 182 40 20 chr17 43279011 43279110 -46225443 + GA-rich Low_complexity Low_complexity 4 104 0 1883 265 67 14 chr17 43279112 43279750 -46224803 + HAL1 LINE L1 1246 1917 -590 445 231 38 75 chr17 43279753 43279913 -46224640 - HAL1 LINE L1 -166 2341 2188 1873 155 36 19 chr17 43279951 43280495 -46224058 + L1MA9 LINE L1 5384 6179 -133 1873 149 46 3 chr17 43280495 43280811 -46223742 + L1MA9 LINE L1 5969 6305 -7 1873 155 36 19 chr17 43280811 43280941 -46223612 + L1MA9 LINE L1 6179 6305 -7 1688 220 20 3 chr17 43281738 43282088 -46222465 - L1PB4 LINE L1 -3 6153 5798 1565 228 33 27 chr17 43282133 43282467 -46222086 - Tigger7 DNA MER2_type -214 336 1 5413 244 99 20 chr17 43282470 43282919 -46221634 + MSTD-int LTR MaLR 126 538 -1197 1829 42 5 0 chr17 43282919 43283134 -46221419 + L1PA4 LINE L1 5937 6152 -3 5413 244 99 20 chr17 43283134 43284176 -46220377 + MSTD-int LTR MaLR 538 1735 0 1145 175 139 9 chr17 43284176 43284399 -46220154 + MSTD LTR MaLR 1 252 -144 287 355 99 37 chr17 43284636 43284960 -46219593 - L2 LINE L2 -1 3271 2928 235 249 65 101 chr17 43285007 43285176 -46219377 + MIR SINE MIR 72 234 -28 363 304 157 73 chr17 43286166 43286811 -46217742 + L1M2 LINE L1 497 1195 -5654 3638 53 4 0 chr17 43287922 43288382 -46216171 - L1P LINE L1 -832 5322 4854 7600 27 5 5 chr17 43288382 43289262 -46215291 + L1PA4 LINE L1 5293 6155 0 580 162 0 10 chr17 43289618 43289717 -46214836 + MER4A LTR ERV1 1 98 -566 1542 136 149 129 chr17 43289717 43290113 -46214440 + MER4A LTR ERV1 261 664 0 2096 117 258 112 chr17 43290126 43290715 -46213838 + MER4A-int LTR ERV1 12 686 -5912 991 233 49 12 chr17 43290861 43291106 -46213447 + MER4A-int LTR ERV1 1848 2101 -4230 1108 107 0 6 chr17 43291186 43291345 -46213208 + MER4B-int LTR ERV1 194 351 -6407 * 1497 122 0 14 chr17 43291342 43291556 -46212997 + MER4B-int LTR ERV1 637 847 -5911 4266 83 0 2 chr17 43291600 43292155 -46212398 + L1PA8A LINE L1 5547 6100 -31 868 48 16 8 chr17 43292175 43292301 -46212252 + (GAAA)n Simple_repeat Simple_repeat 4 130 0 1419 77 31 5 chr17 43292301 43292497 -46212056 + MER4B-int LTR ERV1 945 1145 -5613 351 0 0 0 chr17 43292497 43292536 -46212017 + (TG)n Simple_repeat Simple_repeat 2 40 0 4436 76 74 9 chr17 43292554 43293241 -46211312 + MER4B-int LTR ERV1 1764 2495 -4103 493 225 90 13 chr17 43293241 43293393 -46211160 - LTR8 LTR ERV1 -361 180 78 1923 160 117 32 chr17 43293393 43293900 -46210653 + MER41-int LTR ERV1 3149 3681 -2917 * 8209 106 40 17 chr17 43293899 43295801 -46208752 + MER41-int LTR ERV1 3837 5172 -774 1792 218 78 113 chr17 43295801 43296763 -46207790 + LTR1B LTR ERV1 1 1020 0 3909 137 49 24 chr17 43296764 43297477 -46207076 + MER4A-int LTR ERV1 5863 6593 -5 664 121 0 10 chr17 43297488 43297587 -46206966 + MER4A LTR ERV1 1 98 -566 1864 126 3 25 chr17 43297589 43297938 -46206615 + MER4A LTR ERV1 263 662 -2 458 254 90 66 chr17 43298286 43298645 -46205908 + LTR43 LTR ERV1 180 453 -59 301 334 141 38 chr17 43299848 43300168 -46204385 - L1M2 LINE L1 -6047 802 450 2075 139 0 3 chr17 43301013 43301316 -46203237 - AluSc SINE Alu -7 302 1 300 290 43 91 chr17 43301619 43301805 -46202748 - MIR SINE MIR -13 249 73 389 332 102 43 chr17 43301853 43302178 -46202375 + L2 LINE L2 2928 3271 -1 518 300 11 21 chr17 43302589 43302779 -46201774 - LTR16C LTR ERVL 0 491 304 1336 78 0 0 chr17 43302955 43303134 -46201419 + L1PA5 LINE L1 5975 6153 -1 26 50 0 0 chr17 43303469 43303509 -46201044 + AT_rich Low_complexity Low_complexity 1 40 0 420 207 41 0 chr17 43303650 43303771 -46200782 - LTR16A LTR ERVL -5 445 320 529 134 0 79 chr17 43303771 43303935 -46200618 + (GGGGA)n Simple_repeat Simple_repeat 2 152 0 243 281 0 0 chr17 43304026 43304108 -46200445 + (CAG)n Simple_repeat Simple_repeat 3 84 0 3546 248 123 24 chr17 43304383 43305550 -46199003 + MSTD-int LTR MaLR 453 1735 0 1004 198 121 9 chr17 43305550 43305782 -46198771 + MSTD LTR MaLR 1 258 -138 208 375 98 40 chr17 43306014 43306339 -46198214 - L2 LINE L2 -1 3271 2928 266 286 55 82 chr17 43306387 43306569 -46197984 + MIR SINE MIR 73 249 -13 328 279 146 91 chr17 43307666 43308185 -46196368 + L1M2 LINE L1 528 1075 -5774 279 79 0 0 chr17 43308853 43308891 -46195662 + (TG)n Simple_repeat Simple_repeat 1 38 0 536 162 0 10 chr17 43309688 43309787 -46194766 + MER4A LTR ERV1 1 98 -566 1654 126 159 73 chr17 43309787 43310159 -46194394 + MER4A LTR ERV1 261 664 0 1410 167 186 87 chr17 43310162 43310786 -46193767 + MER4A-int LTR ERV1 1 686 -5912 954 231 41 8 chr17 43310934 43311177 -46193376 + MER4A-int LTR ERV1 1851 2101 -4230 997 119 0 6 chr17 43311257 43311416 -46193137 + MER4B-int LTR ERV1 194 351 -6407 * 1414 117 0 14 chr17 43311413 43311627 -46192926 + MER4B-int LTR ERV1 637 847 -5911 4064 79 0 5 chr17 43311671 43312231 -46192322 + L1PA8A LINE L1 5547 6103 -28 969 79 6 12 chr17 43312246 43312410 -46192143 + (GAAA)n Simple_repeat Simple_repeat 4 166 0 1259 96 30 5 chr17 43312410 43312609 -46191944 + MER4B-int LTR ERV1 945 1148 -5610 336 24 0 0 chr17 43312610 43312651 -46191902 + (TG)n Simple_repeat Simple_repeat 2 42 0 3938 81 74 10 chr17 43312673 43313361 -46191192 + MER4B-int LTR ERV1 1764 2495 -4103 1126 188 75 0 chr17 43313361 43313600 -46190953 - LTR8 LTR ERV1 -434 257 1 412 19 0 0 chr17 43313600 43313653 -46190900 + MER41-int LTR ERV1 2737 2789 -3809 * 2154 146 156 41 chr17 43313652 43314305 -46190248 + MER41-int LTR ERV1 2954 3681 -2917 * 3870 109 55 22 chr17 43314304 43314993 -46189560 + MER41-int LTR ERV1 3837 4548 -2050 7408 109 15 12 chr17 43314997 43316196 -46188357 + MER41-int LTR ERV1 3970 5172 -774 1535 222 68 102 chr17 43316196 43317157 -46187396 + LTR1B LTR ERV1 1 1020 0 3960 122 46 21 chr17 43317157 43317876 -46186677 + MER4A-int LTR ERV1 5862 6598 0 599 124 0 10 chr17 43317879 43317976 -46186577 + MER4A LTR ERV1 3 98 -566 1834 111 3 22 chr17 43317978 43318328 -46186225 + MER4A LTR ERV1 263 664 0 378 252 91 70 chr17 43318681 43318967 -46185586 + LTR43 LTR ERV1 187 478 -124 345 301 237 53 chr17 43320041 43320530 -46184023 - L1M2 LINE L1 -5774 1075 497 1981 121 45 10 chr17 43321204 43321494 -46183059 - AluSc SINE Alu -9 300 1 246 311 26 95 chr17 43321797 43321987 -46182566 - MIR SINE MIR -13 249 73 334 343 102 40 chr17 43322035 43322359 -46182194 + L2 LINE L2 2928 3271 -1 542 318 0 11 chr17 43322771 43322960 -46181593 - LTR16C LTR ERVL 0 491 305 1559 42 0 0 chr17 43323128 43323317 -46181236 + L1PA5 LINE L1 5964 6152 -2 743 288 46 4 chr17 43323843 43323928 -46180625 - LTR16A LTR ERVL -5 445 365 845 57 0 43 chr17 43323928 43324069 -46180484 + (GGGAA)n Simple_repeat Simple_repeat 1 135 0 743 288 46 4 chr17 43324069 43324223 -46180330 - LTR16A LTR ERVL -85 365 196 2390 141 60 7 chr17 43324525 43324959 -46179594 + L1PA16 LINE L1 5701 6157 -9 423 306 149 63 chr17 43325728 43326251 -46178302 - L1M2 LINE L1 -5776 1073 506 381 296 31 31 chr17 43327350 43327512 -46177041 - MIR SINE MIR -2 260 99 24 32 0 0 chr17 43327598 43327629 -46176924 + AT_rich Low_complexity Low_complexity 1 31 0 1654 68 5 9 chr17 43327656 43327875 -46176678 + L1PA8 LINE L1 5952 6169 -3 1498 170 0 76 chr17 43327992 43328281 -46176272 + AluSx SINE Alu 1 267 -45 1014 259 123 35 chr17 43328339 43328852 -46175701 + L1MC4a LINE L1 5351 5908 -1900 262 200 0 62 chr17 43328975 43329055 -46175498 + L1MA9 LINE L1 6238 6312 0 2041 114 4 4 chr17 43329093 43329405 -46175148 - AluSg1 SINE Alu 0 312 1 345 296 54 65 chr17 43329431 43329617 -46174936 + L1MC4a LINE L1 6054 6237 -1571 550 312 42 0 chr17 43329895 43330144 -46174409 + L1MC5 LINE L1 6638 6875 -1086 7376 206 1 1 chr17 43330245 43331896 -46172657 + L1 LINE L1 3235 4885 -1261 455 311 53 37 chr17 43332025 43332347 -46172206 - L1MEc LINE L1 -3710 2505 2179 23 54 0 0 chr17 43332347 43332384 -46172169 + AT_rich Low_complexity Low_complexity 1 37 0 458 269 85 18 chr17 43332946 43333169 -46171384 - HAL1b LINE L1 -767 581 344 693 150 0 0 chr17 43333251 43333384 -46171169 + L1 LINE L1 2322 2454 -3692 288 259 155 0 chr17 43333506 43333622 -46170931 + MER39 LTR ERV1 1 134 -573 377 188 25 0 chr17 43333687 43333767 -46170786 + LTR48 LTR ERV1 380 461 -326 * 480 191 100 24 chr17 43333737 43333929 -46170624 + LTR48 LTR ERV1 384 740 -38 2648 248 52 5 chr17 43334471 43335317 -46169236 + L1MC4 LINE L1 6946 7831 -211 378 145 128 60 chr17 43335347 43335464 -46169089 + L1MC4 LINE L1 7918 8042 0 673 185 25 13 chr17 43335515 43335672 -46168881 - MER57A LTR ERV1 0 403 245 192 77 0 0 chr17 43335782 43335808 -46168745 + (A)n Simple_repeat Simple_repeat 1 26 0 1395 142 4 58 chr17 43335808 43336083 -46168470 - MER57A LTR ERV1 -143 260 1 22 0 0 0 chr17 43336903 43336925 -46167628 + AT_rich Low_complexity Low_complexity 1 22 0 591 39 0 0 chr17 43337174 43337252 -46167301 + L1PA8 LINE L1 5989 6066 -106 1939 138 0 0 chr17 43337252 43337527 -46167026 + AluSc SINE Alu 1 275 -34 1730 129 0 4 chr17 43337627 43337875 -46166678 - AluSq SINE Alu -66 247 1 3257 147 36 65 chr17 43338132 43338248 -46166305 - L1MA9 LINE L1 -35 6277 6159 246 62 0 0 chr17 43338248 43338280 -46166273 + (TG)n Simple_repeat Simple_repeat 1 32 0 3257 147 36 65 chr17 43338280 43338676 -46165877 - L1MA9 LINE L1 -153 6159 5791 318 106 0 0 chr17 43338676 43338723 -46165830 + (TG)n Simple_repeat Simple_repeat 2 48 0 3257 147 36 65 chr17 43338723 43338958 -46165595 - L1MA9 LINE L1 -521 5791 5551 457 284 81 25 chr17 43338955 43339597 -46164956 - L1MEc LINE L1 -4927 1469 792 * 1730 50 0 88 chr17 43339824 43340084 -46164469 - L1PA6 LINE L1 0 6154 5918 423 292 43 52 chr17 43340106 43340339 -46164214 + L2 LINE L2 2001 2231 -1083 372 304 138 76 chr17 43341826 43342355 -46162198 - L1M2 LINE L1 -5654 1195 634 1143 198 70 17 chr17 43343343 43343645 -46160908 + LTR38 LTR ERV1 121 452 -158 248 157 0 0 chr17 43343697 43343748 -46160805 - LTR49 LTR ERV1 -544 51 1 342 210 24 12 chr17 43343832 43343945 -46160608 + LTR38 LTR ERV1 425 556 0 2199 121 3 16 chr17 43343973 43344288 -46160265 - AluSq SINE Alu -2 311 1 210 274 39 0 chr17 43344477 43344528 -46160025 - L2 LINE L2 -94 3219 3167 2684 136 46 31 chr17 43344605 43344813 -46159740 - LTR49 LTR ERV1 -42 553 350 2430 104 39 8 chr17 43344813 43345177 -46159376 - THE1C LTR MaLR 0 375 1 2684 136 46 31 chr17 43345177 43345511 -46159042 - LTR49 LTR ERV1 -245 350 3 242 238 32 16 chr17 43345664 43345727 -46158826 + L2 LINE L2 3167 3230 -83 719 224 0 14 chr17 43346046 43346193 -46158360 - LTR8 LTR ERV1 0 691 547 1727 111 41 4 chr17 43346197 43346468 -46158085 - LTR8A LTR ERV1 -446 281 1 2255 128 0 3 chr17 43346572 43346884 -46157669 + AluY SINE Alu 1 311 0 21 36 0 0 chr17 43346962 43346990 -46157563 + AT_rich Low_complexity Low_complexity 1 28 0 667 111 8 17 chr17 43347380 43347497 -46157056 + (TTCC)n Simple_repeat Simple_repeat 3 118 0 539 311 116 0 chr17 43347576 43347766 -46156787 - MIR SINE MIR -42 220 9 363 317 93 35 chr17 43347822 43348188 -46156365 - L1M4 LINE L1 -991 5155 4769 250 281 31 31 chr17 43348254 43348382 -46156171 - MER70-int LTR ERVL -3605 1418 1291 396 243 45 0 chr17 43349005 43349116 -46155437 + LTR33 LTR ERVL 342 457 -64 788 89 8 0 chr17 43350042 43350165 -46154388 + (GGAA)n Simple_repeat Simple_repeat 3 126 0 261 203 0 31 chr17 43350166 43350230 -46154323 + GA-rich Low_complexity Low_complexity 4 65 0 1890 147 11 0 chr17 43350518 43350837 -46153716 - AluSx SINE Alu 0 322 1 542 310 83 5 chr17 43350868 43351084 -46153469 - MIR SINE MIR -28 234 2 222 37 0 0 chr17 43351127 43351154 -46153399 + (CA)n Simple_repeat Simple_repeat 2 28 0 341 280 212 67 chr17 43351512 43352097 -46152456 - L1M2 LINE L1 -5936 913 244 337 229 0 31 chr17 43352854 43352950 -46151603 - L1MD2 LINE L1 -23 6336 6244 5881 171 29 12 chr17 43353053 43355138 -46149415 - L1MA8 LINE L1 -3 6288 4171 4696 179 18 23 chr17 43355160 43356113 -46148440 - L1PB4 LINE L1 -26 6832 5875 3772 90 62 0 chr17 43356113 43356659 -46147894 + LTR19B LTR ERV1 1 580 0 4696 179 18 23 chr17 43356659 43356817 -46147736 - L1PB4 LINE L1 -983 5875 5718 2255 108 0 0 chr17 43356817 43357113 -46147440 - AluSx SINE Alu -16 296 1 4696 179 18 23 chr17 43357113 43357939 -46146614 - L1PB4 LINE L1 -1140 5718 4914 910 222 4 0 chr17 43357936 43358170 -46146383 - L1 LINE L1 -966 5180 4946 * 3700 200 6 13 chr17 43358168 43359012 -46145541 - L1PB4 LINE L1 -1932 4916 4079 754 250 9 9 chr17 43359045 43359257 -46145296 + L1MD2 LINE L1 6135 6346 -13 241 351 60 36 chr17 43359316 43359484 -46145069 - MIR SINE MIR -70 192 21 782 299 52 17 chr17 43360019 43360307 -46144246 + LTR16A1 LTR ERVL 160 457 0 2240 135 0 0 chr17 43360403 43360707 -46143846 + AluSx SINE Alu 1 304 -8 684 161 0 0 chr17 43360759 43360883 -46143670 + GA-rich Low_complexity Low_complexity 3 126 0 1124 227 87 2 chr17 43360978 43361358 -46143195 + L1MA4 LINE L1 5866 6300 0 624 312 173 0 chr17 43361399 43361787 -46142766 - LTR16C LTR ERVL 0 491 37 22 70 0 0 chr17 43361911 43361954 -46142599 + AT_rich Low_complexity Low_complexity 1 43 0 201 284 0 0 chr17 43362260 43362334 -46142219 + (CAG)n Simple_repeat Simple_repeat 3 76 0 336 274 152 97 chr17 43362429 43362955 -46141598 - L1PB4 LINE L1 -5459 1390 446 619 160 17 28 chr17 43363825 43364006 -46140547 + (TA)n Simple_repeat Simple_repeat 1 179 0 213 74 0 0 chr17 43364006 43364033 -46140520 + (TG)n Simple_repeat Simple_repeat 1 27 0 234 0 0 0 chr17 43364033 43364059 -46140494 + (TA)n Simple_repeat Simple_repeat 1 26 0 219 69 0 0 chr17 43364058 43364087 -46140466 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 341 156 44 7 chr17 43364286 43364421 -46140132 + (TA)n Simple_repeat Simple_repeat 2 141 0 321 47 0 0 chr17 43364463 43364506 -46140047 + (CA)n Simple_repeat Simple_repeat 1 43 0 184 365 54 14 chr17 43364665 43364813 -46139740 + L3 LINE CR1 671 824 -753 1248 182 22 0 chr17 43364958 43365189 -46139364 + MER46A DNA MER2_type 1 236 0 228 320 125 43 chr17 43365472 43365863 -46138690 + L3 LINE CR1 1051 1473 -104 1275 167 23 8 chr17 43366425 43366682 -46137871 - L1MA9 LINE L1 0 6312 6052 479 233 68 0 chr17 43366682 43366815 -46137738 + L1MD2 LINE L1 6197 6338 -21 6280 27 1 5 chr17 43368176 43368956 -46135597 - L1PA2 LINE L1 0 6155 5379 227 397 16 8 chr17 43369013 43369139 -46135414 - MIR SINE MIR -108 154 28 316 282 187 78 chr17 43369855 43370352 -46134201 - L1M2 LINE L1 -5746 1103 553 258 32 0 0 chr17 43371137 43371168 -46133385 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr17 43371265 43371294 -46133259 + AT_rich Low_complexity Low_complexity 1 29 0 800 218 34 89 chr17 43371318 43371423 -46133130 - L1ME2 LINE L1 -15 6149 6040 2227 109 5 102 chr17 43371423 43371826 -46132727 + THE1B LTR MaLR 1 364 0 800 218 34 89 chr17 43371826 43372069 -46132484 - L1ME2 LINE L1 -124 6040 5820 366 295 18 0 chr17 43372126 43372238 -46132315 + MER81 DNA DNA 1 114 0 620 238 48 6 chr17 43372619 43372787 -46131766 - MER5B DNA MER1_type 0 178 4 22 56 0 0 chr17 43373669 43373705 -46130848 + AT_rich Low_complexity Low_complexity 1 36 0 32 81 0 0 chr17 43373885 43373959 -46130594 + AT_rich Low_complexity Low_complexity 1 74 0 233 265 31 0 chr17 43374159 43374257 -46130296 - L1ME3A LINE L1 -206 5964 5864 1348 247 127 51 chr17 43374263 43374814 -46129739 + MLT1E LTR MaLR 1 593 0 1942 86 0 8 chr17 43374874 43375129 -46129424 + AluSc SINE Alu 41 293 -16 464 372 16 31 chr17 43375205 43375522 -46129031 + ERVL LTR ERVL 1239 1550 -3446 222 282 10 10 chr17 43375581 43375650 -46128903 + (TA)n Simple_repeat Simple_repeat 1 72 -31 2229 170 23 28 chr17 43375650 43376086 -46128467 + Tigger2a DNA MER2_type 1 434 0 222 282 10 10 chr17 43376086 43376119 -46128434 + (TA)n Simple_repeat Simple_repeat 71 103 0 476 237 10 0 chr17 43376154 43376251 -46128302 + ERVL LTR ERVL 1703 1800 -3196 506 348 75 25 chr17 43376322 43377129 -46127424 + ERVL LTR ERVL 1905 2806 -2870 545 332 51 47 chr17 43377248 43378226 -46126327 + ERVL LTR ERVL 4243 5283 -481 698 282 72 94 chr17 43378338 43378753 -46125800 + LTR16A1 LTR ERVL 21 426 -31 736 305 125 0 chr17 43379159 43379520 -46125033 - LTR16C LTR ERVL 0 491 86 301 327 93 76 chr17 43379990 43380345 -46124208 - L1M2 LINE L1 -6043 806 446 267 54 0 0 chr17 43382221 43382258 -46122295 + (TG)n Simple_repeat Simple_repeat 2 38 0 2416 153 52 10 chr17 43382329 43382826 -46121727 - L1MA9 LINE L1 0 6312 5795 198 0 0 0 chr17 43382826 43382848 -46121705 + (TG)n Simple_repeat Simple_repeat 2 23 0 665 323 0 9 chr17 43382850 43383082 -46121471 - L1M3b LINE L1 -5085 1694 1465 226 314 23 0 chr17 43383197 43383283 -46121270 + CT-rich Low_complexity Low_complexity 4 91 0 2291 75 0 0 chr17 43383377 43383657 -46120896 - AluY SINE Alu -19 292 13 2462 73 0 0 chr17 43384366 43384666 -46119887 + AluY SINE Alu 1 300 -11 231 291 141 50 chr17 43385940 43386139 -46118414 + L2 LINE L2 3054 3270 -2 314 286 149 64 chr17 43386693 43387081 -46117472 - L1M3b LINE L1 -5776 1073 653 342 250 6 61 chr17 43387771 43387935 -46116618 + L1MC/D LINE L1 5254 5408 -2400 315 301 0 12 chr17 43387956 43388039 -46116514 - L2 LINE L2 0 3313 3232 269 322 16 118 chr17 43388093 43388348 -46116205 + L1MC/D LINE L1 5496 5724 -2084 244 264 58 0 chr17 43388349 43388436 -46116117 + L1MC4 LINE L1 7773 7864 -178 201 156 0 0 chr17 43388597 43388629 -46115924 + GA-rich Low_complexity Low_complexity 4 35 0 2138 125 0 3 chr17 43390080 43390376 -46114177 + AluSx SINE Alu 1 295 -17 224 276 66 0 chr17 43390399 43390475 -46114078 - L2 LINE L2 -5 3267 3187 2624 20 3 0 chr17 43390859 43391156 -46113397 + AluY SINE Alu 1 298 -13 832 170 14 7 chr17 43391639 43391780 -46112773 + FRAM SINE Alu 5 146 -30 24 0 0 0 chr17 43391797 43391821 -46112732 + AT_rich Low_complexity Low_complexity 1 24 0 344 291 112 116 chr17 43392197 43392913 -46111640 + L1M2 LINE L1 527 1239 -5610 186 324 216 28 chr17 43393411 43393587 -46110966 - MIR SINE MIR -21 241 33 5022 69 3 1 chr17 43393762 43394414 -46110139 + L1PA8 LINE L1 5519 6171 -1 49 0 0 0 chr17 43395100 43395149 -46109404 + AT_rich Low_complexity Low_complexity 1 49 0 1263 56 0 0 chr17 43395149 43395310 -46109243 - L1PA5 LINE L1 -6 6148 5988 242 239 0 0 chr17 43395460 43395506 -46109047 - L2 LINE L2 -17 3255 3210 1000 201 40 49 chr17 43395669 43395997 -46108556 + L1M4 LINE L1 4773 5097 -1049 6364 81 3 3 chr17 43395998 43396864 -46107689 + L1PA8 LINE L1 5301 6166 -6 2975 105 2 30 chr17 43397074 43397489 -46107064 + L1PA15 LINE L1 5713 6115 -50 2300 92 3 0 chr17 43397489 43397784 -46106769 + AluSp SINE Alu 1 296 -17 2975 105 2 30 chr17 43397784 43397833 -46106720 + L1PA15 LINE L1 6115 6164 -1 182 283 75 50 chr17 43398146 43398266 -46106287 + L3 LINE CR1 1444 1566 -11 1144 120 39 19 chr17 43398705 43398913 -46105640 - L1MD1 LINE L1 0 6242 6031 22 0 0 0 chr17 43399638 43399660 -46104893 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 43400527 43400550 -46104003 + AT_rich Low_complexity Low_complexity 1 23 0 4088 84 30 2 chr17 43400558 43401150 -46103403 + L1PB1 LINE L1 5539 6147 -4 2088 116 14 7 chr17 43401295 43401587 -46102966 + AluSx SINE Alu 5 298 -14 3968 193 105 18 chr17 43401636 43402220 -46102333 - L1MD1 LINE L1 -1 6635 6103 2299 89 13 3 chr17 43402220 43402523 -46102030 - AluSx SINE Alu -6 306 1 3968 193 105 18 chr17 43402523 43403080 -46101473 - L1MD1 LINE L1 -533 6103 5386 43836 33 21 2 chr17 43403114 43409147 -46095406 - L1PA2 LINE L1 -1 6154 2 312 265 20 20 chr17 43409177 43409275 -46095278 - L1MD1 LINE L1 -1199 5341 5244 2534 169 0 24 chr17 43409282 43409707 -46094846 - Tigger2a DNA MER2_type 0 434 20 749 276 32 0 chr17 43409709 43409930 -46094623 - L1MD1 LINE L1 -1298 5242 5015 997 214 108 62 chr17 43409952 43410340 -46094213 - L1MD1 LINE L1 -1698 4842 4437 * 2613 214 9 28 chr17 43410336 43411008 -46093545 - L1MD1 LINE L1 -2916 3624 2966 4659 216 204 27 chr17 43411026 43411623 -46092930 - L1MD1 LINE L1 -4731 1809 1319 2170 107 0 0 chr17 43411623 43411914 -46092639 - AluSc SINE Alu -18 291 1 4659 216 204 27 chr17 43411914 43412583 -46091970 - L1MD1 LINE L1 -5221 1319 769 288 0 0 0 chr17 43412583 43412615 -46091938 + (TG)n Simple_repeat Simple_repeat 1 32 0 4659 216 204 27 chr17 43412615 43412882 -46091671 - L1MD1 LINE L1 -5771 769 4 809 239 25 0 chr17 43413071 43413268 -46091285 + L1MC4 LINE L1 7841 8042 0 398 258 100 46 chr17 43413436 43413805 -46090748 + L1ME LINE L1 2921 3309 -2837 225 266 53 32 chr17 43413873 43413967 -46090586 + L1ME LINE L1 4920 5015 -1131 281 298 41 8 chr17 43414314 43414435 -46090118 - L1MEc LINE L1 -6198 198 74 2348 99 3 3 chr17 43415582 43415895 -46088658 - AluSp SINE Alu 0 313 1 2280 105 0 7 chr17 43416172 43416476 -46088077 - AluSq SINE Alu -11 302 1 180 402 12 0 chr17 43416717 43416799 -46087754 - MIR SINE MIR -90 118 36 528 157 45 60 chr17 43417308 43417353 -46087200 - L1MB3 LINE L1 -1 6182 6138 2119 136 0 3 chr17 43417353 43417655 -46086898 - AluSg SINE Alu -9 301 1 528 157 45 60 chr17 43417655 43417743 -46086810 - L1MB3 LINE L1 -45 6138 6051 23 0 0 0 chr17 43417743 43417766 -46086787 + AT_rich Low_complexity Low_complexity 1 23 0 4114 98 19 11 chr17 43417766 43418330 -46086223 - L1PA11 LINE L1 0 6174 5606 26760 112 18 75 chr17 43418330 43418490 -46086063 + L1P3 LINE L1 252 419 -6042 181 57 57 0 chr17 43418490 43418525 -46086028 + (TTG)n Simple_repeat Simple_repeat 2 38 0 26760 112 18 75 chr17 43418525 43421004 -46083549 + L1P3 LINE L1 419 3036 -3425 2217 110 0 3 chr17 43421004 43421296 -46083257 + AluSg SINE Alu 1 291 -19 26760 112 18 75 chr17 43421296 43421604 -46082949 + L1P3 LINE L1 3036 3360 -3101 1996 118 24 14 chr17 43421604 43421893 -46082660 + AluSg SINE Alu 1 292 -18 26760 112 18 75 chr17 43421893 43422155 -46082398 + L1P3 LINE L1 3360 3635 -2826 2059 110 4 4 chr17 43422155 43422532 -46082021 + AluY SINE Alu 1 377 0 26760 112 18 75 chr17 43422532 43424776 -46079777 + L1P3 LINE L1 3635 5399 -1062 7033 57 6 1 chr17 43424776 43425606 -46078947 + L1PA7 LINE L1 5308 6141 -13 782 194 30 0 chr17 43425613 43425747 -46078806 + Tigger3(Golem) DNA MER2_type 2883 3020 -9 459 0 0 0 chr17 43425925 43425976 -46078577 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 258 272 125 15 chr17 43426015 43426151 -46078402 + L1ME LINE L1 5297 5447 -715 329 225 0 14 chr17 43426233 43426304 -46078249 + L1ME LINE L1 5589 5658 -512 529 286 80 32 chr17 43427305 43427436 -46077117 + L1M4 LINE L1 3727 3850 -2296 1820 147 4 0 chr17 43427436 43427701 -46076852 + AluSx SINE Alu 35 300 -12 529 286 80 32 chr17 43427701 43428006 -46076547 + L1M4 LINE L1 3850 4184 -1962 290 272 22 22 chr17 43428120 43428212 -46076341 - MER81 DNA DNA -6 108 17 1090 203 88 19 chr17 43431144 43431405 -46073148 + L1MA9 LINE L1 6034 6312 0 239 264 54 81 chr17 43431481 43431549 -46073004 - MIR SINE MIR -10 252 184 2400 87 0 0 chr17 43431549 43431848 -46072705 - AluY SINE Alu -12 299 1 239 264 54 81 chr17 43431848 43431927 -46072626 - MIR SINE MIR -78 184 109 841 262 106 11 chr17 43431936 43432211 -46072342 - LTR16C LTR ERVL 0 491 191 202 269 19 0 chr17 43432429 43432481 -46072072 + GA-rich Low_complexity Low_complexity 3 55 0 809 116 22 33 chr17 43432495 43432676 -46071877 + GA-rich Low_complexity Low_complexity 2 180 0 651 238 176 84 chr17 43432975 43433332 -46071221 + MLT1B LTR MaLR 1 390 0 1178 176 88 19 chr17 43436936 43437197 -46067356 + L1MA9 LINE L1 6034 6312 0 215 342 70 0 chr17 43437294 43437408 -46067145 - MIR SINE MIR -24 238 117 724 299 104 0 chr17 43437422 43437690 -46066863 - LTR16C LTR ERVL -1 490 195 217 169 0 56 chr17 43437912 43438001 -46066552 + GA-rich Low_complexity Low_complexity 2 85 0 861 148 0 22 chr17 43438016 43438199 -46066354 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 339 194 37 22 chr17 43438199 43438333 -46066220 + GA-rich Low_complexity Low_complexity 2 137 0 539 271 59 51 chr17 43438629 43438980 -46065573 + MLT1C LTR MaLR 57 467 0 41567 66 11 0 chr17 43442177 43448267 -46056286 + L1PA5 LINE L1 1 6154 0 1199 172 88 19 chr17 43448615 43448876 -46055677 + L1MA9 LINE L1 6034 6312 0 257 318 71 0 chr17 43448973 43449099 -46055454 - MIR SINE MIR -24 238 104 679 307 100 0 chr17 43449104 43449374 -46055179 - LTR16C LTR ERVL 0 491 195 462 194 18 24 chr17 43449600 43449765 -46054788 + GA-rich Low_complexity Low_complexity 2 165 0 718 150 23 23 chr17 43449787 43449960 -46054593 + GA-rich Low_complexity Low_complexity 3 175 0 216 88 0 29 chr17 43449960 43449994 -46054559 + (GGAAA)n Simple_repeat Simple_repeat 2 34 0 561 265 66 64 chr17 43450291 43450642 -46053911 + MLT1C LTR MaLR 57 467 0 322 311 110 57 chr17 43450801 43451065 -46053488 + L1ME3A LINE L1 5888 6165 -5 324 298 127 77 chr17 43451956 43452396 -46052157 + L1M2 LINE L1 513 974 -5875 1170 172 88 23 chr17 43454145 43454407 -46050146 + L1MA9 LINE L1 6034 6312 0 291 333 62 7 chr17 43454489 43454633 -46049920 - MIR SINE MIR -7 255 104 736 301 104 0 chr17 43454638 43454907 -46049646 - LTR16C LTR ERVL 0 491 195 238 236 16 24 chr17 43455129 43455256 -46049297 + GA-rich Low_complexity Low_complexity 4 129 0 213 281 22 22 chr17 43455257 43455346 -46049207 + A-rich Low_complexity Low_complexity 3 91 0 744 250 129 81 chr17 43455638 43456010 -46048543 + MLT1B LTR MaLR 1 390 0 309 323 94 49 chr17 43456169 43456435 -46048118 + L1ME3A LINE L1 5888 6165 -5 1916 142 0 0 chr17 43456520 43456808 -46047745 + AluSg SINE Alu 11 298 -12 182 282 127 14 chr17 43458676 43458747 -46045806 - MIR SINE MIR -59 203 125 7084 194 5 3 chr17 43459103 43461198 -46043355 - L1PA15 LINE L1 -7 6158 4061 769 192 13 0 chr17 43461955 43462184 -46042369 + L1MA9 LINE L1 6034 6312 0 12118 96 2 1 chr17 43462164 43464591 -46039962 + L1PA8 LINE L1 3735 6166 -6 209 343 55 7 chr17 43464665 43464811 -46039742 - MIR SINE MIR -3 259 107 332 306 47 16 chr17 43464813 43465065 -46039488 - LTR16C LTR ERVL 0 491 214 213 211 0 0 chr17 43465304 43465356 -46039197 + GA-rich Low_complexity Low_complexity 3 54 0 569 171 34 23 chr17 43465437 43465613 -46038940 + GA-rich Low_complexity Low_complexity 3 180 0 822 197 79 128 chr17 43465896 43466201 -46038352 + MLT1B LTR MaLR 83 372 -18 383 336 88 27 chr17 43466383 43466645 -46037908 + L1ME3A LINE L1 5888 6165 -5 486 46 0 0 chr17 43466716 43466781 -46037772 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 262 194 0 97 chr17 43466877 43466939 -46037614 - MER81 DNA DNA -55 59 4 1921 126 14 17 chr17 43468161 43468455 -46036098 - AluSx SINE Alu -17 295 3 1088 123 67 140 chr17 43470120 43470420 -46034133 + L1MA9 LINE L1 6034 6311 -1 303 311 54 7 chr17 43470499 43470647 -46033906 - MIR SINE MIR 0 262 108 566 333 102 0 chr17 43470661 43470925 -46033628 - LTR16C LTR ERVL -6 485 195 720 190 16 13 chr17 43471149 43471500 -46033053 + GA-rich Low_complexity Low_complexity 1 352 0 1115 250 157 3 chr17 43471808 43472179 -46032374 + MLT1C LTR MaLR 1 467 0 311 297 0 54 chr17 43472719 43472830 -46031723 - MER81 DNA DNA -9 105 1 1165 178 72 19 chr17 43475096 43475360 -46029193 + L1MA9 LINE L1 6034 6311 -1 22 70 0 0 chr17 43475385 43475428 -46029125 + AT_rich Low_complexity Low_complexity 1 43 0 275 269 64 19 chr17 43475441 43475597 -46028956 - MIR SINE MIR 0 262 100 392 244 61 0 chr17 43475597 43475712 -46028841 - LTR16C LTR ERVL 0 491 370 744 250 30 89 chr17 43476237 43476603 -46027950 + MLT1B LTR MaLR 1 388 -2 230 324 0 54 chr17 43477157 43477268 -46027285 - MER81 DNA DNA -9 105 1 1139 174 70 41 chr17 43479492 43479762 -46024791 + L1MA9 LINE L1 6034 6311 -1 32 43 0 0 chr17 43479787 43479833 -46024720 + AT_rich Low_complexity Low_complexity 1 46 0 297 282 58 13 chr17 43479846 43480002 -46024551 - MIR SINE MIR 0 262 100 589 324 91 11 chr17 43480002 43480277 -46024276 - LTR16C LTR ERVL 0 491 195 469 223 11 0 chr17 43480682 43480776 -46023777 + MLT1C LTR MaLR 83 177 -290 239 137 0 20 chr17 43480787 43480838 -46023715 + (GGAA)n Simple_repeat Simple_repeat 2 51 0 252 330 18 0 chr17 43480921 43481030 -46023523 - ERVL LTR ERVL -446 5318 5208 518 243 18 0 chr17 43481147 43481258 -46023295 + MLT1C LTR MaLR 83 195 -272 4707 125 20 6 chr17 43481259 43482319 -46022234 + L1MA1 LINE L1 4843 5912 -390 4819 50 4 0 chr17 43483449 43484008 -46020545 + L1PA6 LINE L1 5588 6148 -6 270 297 148 45 chr17 43484123 43484278 -46020275 - MIR SINE MIR -64 198 28 420 256 30 63 chr17 43485065 43485209 -46019344 - MIR SINE MIR -62 146 15 469 287 87 0 chr17 43485364 43485514 -46019039 - L2 LINE L2 -2 3311 3149 183 317 122 32 chr17 43486424 43486547 -46018006 + L3 LINE CR1 1374 1507 -70 21 0 0 0 chr17 43486715 43486736 -46017817 + AT_rich Low_complexity Low_complexity 1 21 0 1958 84 105 25 chr17 43488794 43489080 -46015473 - AluSc SINE Alu 0 309 1 2880 161 2 22 chr17 43489772 43490262 -46014291 - MER31A LTR ERV1 0 485 6 2054 123 7 0 chr17 43490633 43490918 -46013635 + AluSx SINE Alu 1 287 -25 30 0 0 0 chr17 43490918 43490948 -46013605 + AT_rich Low_complexity Low_complexity 1 30 0 2008 133 0 3 chr17 43491083 43491368 -46013185 + AluSx SINE Alu 3 286 -26 954 127 0 8 chr17 43492135 43492269 -46012284 + AluSq/x SINE Alu 1 133 -179 327 240 13 0 chr17 43492292 43492367 -46012186 - MER116 DNA Mariner -2 78 3 252 0 0 0 chr17 43492459 43492487 -46012066 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2059 105 45 7 chr17 43492642 43492801 -46011752 - AluSq SINE Alu -16 297 121 526 27 0 27 chr17 43492801 43492875 -46011678 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 2059 105 45 7 chr17 43492875 43493001 -46011552 - AluSq SINE Alu -192 121 1 331 323 175 16 chr17 43493807 43494064 -46010489 + L3 LINE CR1 209 506 -1071 2144 107 7 3 chr17 43494431 43494721 -46009832 + AluSq SINE Alu 3 293 -20 2142 92 3 0 chr17 43494866 43495149 -46009404 + AluY SINE Alu 23 306 -5 484 336 149 21 chr17 43495259 43495682 -46008871 + L3 LINE CR1 1074 1550 -27 2012 111 3 24 chr17 43495707 43495996 -46008557 + AluSx SINE Alu 13 295 -17 462 318 78 16 chr17 43496157 43496415 -46008138 + L2 LINE L2 561 834 -2480 574 237 130 0 chr17 43496639 43496770 -46007783 + MLT1G LTR MaLR 372 519 -71 844 236 48 62 chr17 43496770 43497062 -46007491 + MLT1G-int LTR MaLR 325 612 -759 2276 85 3 7 chr17 43497273 43497578 -46006975 + AluSg SINE Alu 1 304 -6 234 333 19 19 chr17 43497690 43497795 -46006758 + MLT1G-int LTR MaLR 741 845 -526 1614 131 0 21 chr17 43497795 43498031 -46006522 - THE1B LTR MaLR -133 231 1 302 60 71 12 chr17 43498060 43498144 -46006409 + (TA)n Simple_repeat Simple_repeat 2 90 0 1689 53 48 0 chr17 43498147 43498353 -46006200 - L1PA5 LINE L1 -14 6140 5925 1380 274 50 0 chr17 43498354 43498711 -46005842 + MLT1F1 LTR MaLR 193 567 0 27 62 0 0 chr17 43498838 43498886 -46005667 + AT_rich Low_complexity Low_complexity 1 48 0 517 329 65 32 chr17 43499990 43500422 -46004131 - L1ME2 LINE L1 -233 5931 5486 989 193 26 64 chr17 43500428 43500453 -46004100 + MER58A DNA MER1_type 1 25 -2395 4250 138 53 57 chr17 43500453 43501241 -46003312 + LTR1 LTR ERV1 1 785 0 989 193 26 64 chr17 43501241 43501448 -46003105 + MER58A DNA MER1_type 25 224 0 259 298 57 7 chr17 43501457 43501598 -46002955 - L1ME2 LINE L1 -684 5478 5331 217 310 172 21 chr17 43501901 43502046 -46002507 - MIR3 SINE MIR -33 175 9 399 209 0 0 chr17 43502609 43502714 -46001839 + (TG)n Simple_repeat Simple_repeat 1 105 0 501 223 0 9 chr17 43503118 43503230 -46001323 + LTR41 LTR ERVL 3 113 -660 980 81 0 0 chr17 43503233 43503357 -46001196 + AluSp/q SINE Alu 185 308 -5 184 328 195 16 chr17 43505686 43505814 -45998739 - MIR SINE MIR -12 250 100 351 128 0 64 chr17 43505838 43505916 -45998637 + LTR49-int LTR ERV1 1779 1851 -4480 248 323 48 32 chr17 43505939 43506063 -45998490 - MIR SINE MIR -126 136 11 248 319 7 44 chr17 43506565 43506700 -45997853 + MIR SINE MIR 6 135 -127 300 300 46 8 chr17 43507451 43507581 -45996972 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 557 274 72 13 chr17 43507586 43507831 -45996722 - L1ME3A LINE L1 -243 5927 5673 214 225 0 0 chr17 43507841 43507881 -45996672 + MIR SINE MIR 194 233 -29 369 0 0 0 chr17 43507903 43507944 -45996609 + (TG)n Simple_repeat Simple_repeat 2 42 0 2070 108 14 0 chr17 43507946 43508223 -45996330 - AluSx SINE Alu -31 281 1 1192 173 33 9 chr17 43508349 43508563 -45995990 + MER20 DNA MER1_type 1 219 0 477 331 96 50 chr17 43509136 43509438 -45995115 + L2 LINE L2 2936 3251 -21 183 129 0 0 chr17 43509446 43509477 -45995076 + (TGGA)n Simple_repeat Simple_repeat 2 32 0 211 384 50 0 chr17 43511886 43511985 -45992568 - L2 LINE L2 -45 3227 3124 2086 128 7 0 chr17 43512191 43512481 -45992072 + AluSx SINE Alu 13 304 -8 426 69 0 0 chr17 43512481 43512539 -45992014 + (GGAA)n Simple_repeat Simple_repeat 1 58 0 1256 39 6 17 chr17 43512539 43512717 -45991836 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 207 203 0 102 chr17 43512722 43512781 -45991772 - MIR SINE MIR -128 134 82 271 298 0 0 chr17 43513280 43513374 -45991179 + (TTCA)n Simple_repeat Simple_repeat 1 94 0 1918 132 46 7 chr17 43513703 43513983 -45990570 + AluSx SINE Alu 1 291 -21 437 339 86 38 chr17 43514073 43514412 -45990141 - L2 LINE L2 -353 2961 2607 571 273 281 0 chr17 43514691 43514933 -45989620 + L2 LINE L2 3004 3313 0 2560 214 55 26 chr17 43515291 43516012 -45988541 + L1ME1 LINE L1 5420 6161 -5 322 270 130 9 chr17 43516111 43516226 -45988327 + L1ME4a LINE L1 5992 6120 -1 464 289 13 53 chr17 43516743 43516895 -45987658 + MER5A DNA MER1_type 33 178 -11 725 265 11 6 chr17 43516908 43517089 -45987464 - MER5A DNA MER1_type -3 186 5 206 348 0 0 chr17 43517645 43517823 -45986730 + (CAG)n Simple_repeat Simple_repeat 3 180 0 229 214 12 24 chr17 43518714 43518798 -45985755 + GA-rich Low_complexity Low_complexity 1 83 0 248 196 18 36 chr17 43519314 43519370 -45985183 - MIR3 SINE MIR -3 205 151 301 307 0 64 chr17 43519371 43519511 -45985042 + MER5B DNA MER1_type 18 148 -30 1956 139 0 0 chr17 43519747 43520052 -45984501 - AluSx SINE Alu 0 305 1 430 188 27 71 chr17 43520200 43520312 -45984241 + MIR SINE MIR 98 204 -58 22 56 0 0 chr17 43521127 43521163 -45983390 + AT_rich Low_complexity Low_complexity 1 36 0 279 215 54 46 chr17 43521180 43521310 -45983243 + L1ME4a LINE L1 5935 6065 -56 24 53 0 0 chr17 43521334 43521372 -45983181 + AT_rich Low_complexity Low_complexity 1 38 0 909 313 55 8 chr17 43521473 43521872 -45982681 + L1MC/D LINE L1 5291 5708 -2100 6135 111 10 9 chr17 43521888 43522931 -45981622 + L1PA16 LINE L1 4595 5646 -520 2740 127 29 5 chr17 43522931 43523349 -45981204 - MSTA LTR MaLR 0 428 1 6135 111 10 9 chr17 43523349 43523862 -45980691 + L1PA16 LINE L1 5646 6157 -9 422 269 215 40 chr17 43523872 43524095 -45980458 - L1MC/D LINE L1 -2231 5577 5316 305 379 36 0 chr17 43524251 43524391 -45980162 - L1MC/D LINE L1 -1030 5116 4972 1194 130 0 93 chr17 43524474 43524690 -45979863 + AluJo SINE Alu 103 298 -14 493 326 112 5 chr17 43524974 43525161 -45979392 - MIR SINE MIR -34 228 22 540 249 62 36 chr17 43525183 43525408 -45979145 - L2 LINE L2 -358 2956 2726 645 328 63 17 chr17 43531448 43531863 -45972690 + ERVL LTR ERVL 4007 4440 -1324 618 217 11 74 chr17 43532166 43532316 -45972237 - L1MD3 LINE L1 0 7995 7858 1703 144 0 78 chr17 43532316 43532635 -45971918 + AluJo SINE Alu 1 294 -18 618 217 11 74 chr17 43532635 43532673 -45971880 - L1MD3 LINE L1 -137 7858 7819 352 260 39 19 chr17 43532732 43532836 -45971717 - L1MD3 LINE L1 -185 7810 7705 784 211 11 6 chr17 43532853 43533033 -45971520 - Tigger3(Golem) DNA MER2_type -118 2911 2731 771 188 0 0 chr17 43533033 43533150 -45971403 + FLAM_C SINE Alu 1 117 -16 424 232 0 0 chr17 43533191 43533273 -45971280 - Tigger3(Golem) DNA MER2_type -2947 82 1 870 181 7 0 chr17 43533279 43533434 -45971119 - MER2 DNA MER2_type -189 156 1 586 261 28 0 chr17 43533573 43533715 -45970838 + MIR SINE MIR 47 192 -70 197 333 0 0 chr17 43534477 43534531 -45970022 - MIR SINE MIR -173 89 36 744 237 107 3 chr17 43534534 43534847 -45969706 + L2 LINE L2 2728 3069 -244 193 224 20 20 chr17 43535299 43535348 -45969205 + MIR3 SINE MIR 14 62 -146 611 292 110 17 chr17 43535468 43536015 -45968538 - L2 LINE L2 -244 3069 2463 196 327 0 0 chr17 43536039 43536094 -45968459 + MIR SINE MIR 35 89 -173 1485 137 120 39 chr17 43536507 43536858 -45967695 - THE1C LTR MaLR 0 432 1 203 231 0 0 chr17 43537654 43537693 -45966860 + C-rich Low_complexity Low_complexity 4 42 0 394 221 11 22 chr17 43538009 43538190 -45966363 + GA-rich Low_complexity Low_complexity 2 180 0 228 228 0 0 chr17 43538702 43538759 -45965794 + (TG)n Simple_repeat Simple_repeat 2 58 0 1865 141 0 10 chr17 43538960 43539251 -45965302 - MER1A DNA MER1_type 0 529 242 184 125 25 50 chr17 43541683 43541723 -45962830 + MIR SINE MIR 106 144 -118 370 326 121 0 chr17 43541938 43542079 -45962474 + MER91A DNA MER1_type 1 158 -38 240 184 0 0 chr17 43542405 43542454 -45962099 + CT-rich Low_complexity Low_complexity 4 52 0 211 273 0 0 chr17 43542464 43542508 -45962045 + polypyrimidine Low_complexity Low_complexity 3 46 0 242 276 0 13 chr17 43543294 43543370 -45961183 + (CA)n Simple_repeat Simple_repeat 2 76 0 216 295 90 39 chr17 43543595 43543751 -45960802 - MIR SINE MIR 0 262 99 6865 67 35 3 chr17 43544083 43544953 -45959600 - MER11D LTR ERVK 0 897 1 266 306 117 17 chr17 43545336 43545687 -45958866 + L2 LINE L2 2665 3049 -223 251 265 29 0 chr17 43547507 43547575 -45956978 + (TG)n Simple_repeat Simple_repeat 1 70 0 274 276 0 0 chr17 43550136 43550194 -45954359 + MIR SINE MIR 203 260 -2 212 266 219 31 chr17 43550316 43550444 -45954109 + MIR3 SINE MIR 16 167 -41 840 154 0 54 chr17 43551088 43551237 -45953316 + FRAM SINE Alu 22 162 -14 334 318 30 23 chr17 43551933 43552065 -45952488 - L2 LINE L2 -17 3296 3164 180 0 0 0 chr17 43553148 43553168 -45951385 + (T)n Simple_repeat Simple_repeat 1 20 0 324 223 36 71 chr17 43553831 43553943 -45950610 - MIR SINE MIR -75 187 80 198 317 0 0 chr17 43554670 43554730 -45949823 - L2 LINE L2 -654 2660 2601 363 257 193 0 chr17 43555747 43555887 -45948666 - MIR3 SINE MIR -33 175 9 375 341 22 0 chr17 43556897 43557035 -45947518 - MIR3 SINE MIR -14 194 54 237 322 52 63 chr17 43557054 43557228 -45947325 + L1MEd LINE L1 1097 1268 -5679 29 84 0 0 chr17 43557228 43557299 -45947254 + AT_rich Low_complexity Low_complexity 1 71 0 546 224 43 6 chr17 43558278 43558439 -45946114 + L1MEd LINE L1 1777 1943 -5004 350 294 49 21 chr17 43558459 43558602 -45945951 + L1MEd LINE L1 17 163 -6696 2425 206 13 8 chr17 43558902 43559435 -45945118 + L1MB8 LINE L1 4546 5081 -1065 1384 181 79 8 chr17 43559461 43559804 -45944749 + L1MB8 LINE L1 5830 6184 0 689 279 50 37 chr17 43559815 43560217 -45944336 + L1MEd LINE L1 2004 2410 -4728 1722 192 42 20 chr17 43560237 43560615 -45943938 - MSTD LTR MaLR -2 394 1 1498 189 14 10 chr17 43560791 43561088 -45943465 + AluJo SINE Alu 11 308 -4 1539 151 6 95 chr17 43561135 43561384 -45943169 + AluJo SINE Alu 5 220 -92 2458 155 36 5 chr17 43561384 43561798 -45942755 - MSTA LTR MaLR 0 428 2 1539 151 6 95 chr17 43561798 43561873 -45942680 + AluJo SINE Alu 220 300 -12 235 131 33 98 chr17 43562095 43562156 -45942397 + L1M1 LINE L1 3553 3609 -3956 331 229 211 40 chr17 43562156 43562379 -45942174 + L2 LINE L2 3049 3309 -4 22 35 0 0 chr17 43562408 43562437 -45942116 + AT_rich Low_complexity Low_complexity 1 29 0 3817 155 16 74 chr17 43562593 43563279 -45941274 - MER72 LTR ERV1 0 722 84 3804 65 0 0 chr17 43563279 43563758 -45940795 - L1PA7 LINE L1 0 6154 5676 3817 155 16 74 chr17 43563758 43563838 -45940715 - MER72 LTR ERV1 -638 84 1 1892 168 3 3 chr17 43564437 43564740 -45939813 + AluJb SINE Alu 1 303 -9 273 239 18 13 chr17 43565178 43565303 -45939250 - MARNA DNA Mariner -409 177 10 226 195 0 0 chr17 43565383 43565424 -45939129 + L2 LINE L2 3257 3297 -16 252 252 113 70 chr17 43566394 43566509 -45938044 + MIR SINE MIR 56 175 -87 185 315 34 11 chr17 43567954 43568043 -45936510 + MIR3 SINE MIR 109 199 -9 282 143 0 0 chr17 43568294 43568343 -45936210 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 28 48 0 0 chr17 43568959 43569001 -45935552 + AT_rich Low_complexity Low_complexity 1 42 0 272 270 121 0 chr17 43569290 43569406 -45935147 + MIR SINE MIR 78 206 -56 2237 114 0 7 chr17 43569674 43569981 -45934572 + AluSx SINE Alu 1 305 -7 343 268 168 17 chr17 43569983 43570162 -45934391 - L3 LINE CR1 -2 1575 1370 471 189 158 0 chr17 43570507 43570602 -45933951 + MER81 DNA DNA 3 112 -2 384 283 117 0 chr17 43570757 43570902 -45933651 + L2 LINE L2 3109 3270 -2 368 320 157 5 chr17 43572756 43572953 -45931600 - MIR SINE MIR -15 247 21 1102 268 68 9 chr17 43573487 43573827 -45930726 - MARNA DNA Mariner -138 448 89 2255 93 0 44 chr17 43573890 43574211 -45930342 - AluSx SINE Alu -5 307 1 22 0 0 0 chr17 43575209 43575231 -45929322 + AT_rich Low_complexity Low_complexity 1 22 0 1897 55 0 0 chr17 43575785 43576020 -45928533 - L1PA13 LINE L1 -2 6161 5927 1344 153 40 9 chr17 43576848 43577070 -45927483 + MLT2B2 LTR ERVL 1 229 -286 1791 175 14 0 chr17 43577253 43577538 -45927015 + MLT2B1 LTR ERVL 232 520 0 2207 100 0 48 chr17 43577965 43578276 -45926277 - AluY SINE Alu -15 296 1 191 313 69 61 chr17 43578679 43578810 -45925743 + L2 LINE L2 3105 3236 -36 1917 112 14 57 chr17 43580519 43580839 -45923714 - AluSx SINE Alu 0 307 1 2196 104 7 0 chr17 43582231 43582520 -45922033 + AluSc SINE Alu 1 291 -18 266 302 20 94 chr17 43582933 43583082 -45921471 + L2 LINE L2 3117 3254 -18 2442 78 3 0 chr17 43585262 43585568 -45918985 - AluSg SINE Alu -2 308 2 834 131 0 29 chr17 43585568 43585697 -45918856 + MER58A DNA MER1_type 55 181 -43 5105 224 60 53 chr17 43586363 43587938 -45916615 - L1 LINE L1 -2851 3119 1556 2169 116 0 0 chr17 43587938 43588275 -45916278 + AluSq SINE Alu 1 337 0 5105 224 60 53 chr17 43588275 43589219 -45915334 - L1 LINE L1 -4414 1556 944 2175 138 0 0 chr17 43589219 43589524 -45915029 - AluSx SINE Alu -7 305 1 5105 224 60 53 chr17 43589524 43590475 -45914078 - L1 LINE L1 -5026 944 1 247 347 88 20 chr17 43590479 43590626 -45913927 + MIR SINE MIR 20 176 -86 209 29 0 57 chr17 43590626 43590661 -45913892 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 505 264 83 22 chr17 43591194 43591405 -45913148 - MIR SINE MIR -12 250 31 232 287 88 55 chr17 43591931 43592112 -45912441 - MIR SINE MIR -6 256 70 2290 87 3 3 chr17 43592330 43592619 -45911934 + AluSc SINE Alu 3 291 -18 260 333 18 18 chr17 43593362 43593473 -45911080 - MIR SINE MIR -113 149 39 706 203 40 40 chr17 43593475 43593652 -45910901 + MER5B DNA MER1_type 2 178 0 304 280 85 34 chr17 43593883 43594001 -45910552 - MARNA DNA Mariner -201 385 262 690 64 11 0 chr17 43594100 43594194 -45910359 + L1MB4 LINE L1 6085 6179 -1 1194 179 60 123 chr17 43594194 43594607 -45909946 - MLT1D LTR MaLR -118 387 1 252 59 0 0 chr17 43594911 43594945 -45909608 + (TA)n Simple_repeat Simple_repeat 1 34 0 186 219 124 57 chr17 43595295 43595400 -45909153 + L2 LINE L2 3198 3309 -4 282 306 74 33 chr17 43596604 43596783 -45907770 + MIR SINE MIR 23 195 -60 2249 105 3 7 chr17 43600601 43600906 -45903647 + AluSc SINE Alu 1 304 -5 207 0 0 0 chr17 43601142 43601165 -45903388 + (TA)n Simple_repeat Simple_repeat 1 23 0 2543 64 0 0 chr17 43601165 43601460 -45903093 - AluY SINE Alu -16 295 1 1856 140 0 51 chr17 43603712 43604036 -45900517 + AluSp SINE Alu 3 305 -8 933 175 17 11 chr17 43604031 43604208 -45900345 + AluJo/FRAM SINE Alu 129 306 -6 309 342 47 13 chr17 43604236 43604385 -45900168 - L2 LINE L2 -18 3254 3101 262 376 28 32 chr17 43605305 43605523 -45899030 + MIR SINE MIR 20 236 -26 1139 235 8 35 chr17 43605835 43606095 -45898458 + MIR SINE MIR 4 256 -6 316 146 0 37 chr17 43606097 43606179 -45898374 + (ATG)n Simple_repeat Simple_repeat 3 81 0 289 271 104 35 chr17 43607039 43607183 -45897370 - L3 LINE CR1 -1 1576 1423 723 194 152 6 chr17 43607551 43607716 -45896837 - MER5A DNA MER1_type 0 189 1 185 272 173 0 chr17 43608998 43609079 -45895474 - MIR SINE MIR -84 124 30 183 338 124 28 chr17 43611210 43611355 -45893198 - L2 LINE L2 -3 3269 3111 289 350 39 0 chr17 43611724 43611827 -45892726 + MIR SINE MIR 45 151 -57 2329 116 0 0 chr17 43612501 43612802 -45891751 + AluSx SINE Alu 1 301 -11 1220 213 0 18 chr17 43613351 43613576 -45890977 - MER58A DNA MER1_type -3 221 1 373 255 94 27 chr17 43615088 43615237 -45889316 + L1M4 LINE L1 2809 2967 -3179 302 280 60 10 chr17 43615848 43615948 -45888605 - L3 LINE CR1 -8 1569 1465 357 269 0 43 chr17 43616148 43616241 -45888312 - L2 LINE L2 0 3272 3184 204 295 246 39 chr17 43616248 43616455 -45888098 - L3 LINE CR1 -229 1348 1099 2081 91 4 4 chr17 43616971 43617235 -45887318 + AluSc SINE Alu 1 264 -45 971 173 21 31 chr17 43617485 43617676 -45886877 - MER5A DNA MER1_type 0 189 1 205 293 17 0 chr17 43618015 43618073 -45886480 - L2 LINE L2 -16 3297 3239 449 344 22 43 chr17 43618160 43618390 -45886163 - MIR SINE MIR -18 244 20 213 338 0 27 chr17 43618481 43618555 -45885998 - L2 LINE L2 -4 3309 3238 653 304 40 24 chr17 43618626 43618922 -45885631 - LTR24B LTR ERV1 -6 570 270 379 203 2 25 chr17 43619030 43619128 -45885425 - LTR24B LTR ERV1 -368 97 4 205 285 77 62 chr17 43619128 43619139 -45885414 + L2 LINE L2 3164 3173 -140 2315 109 3 0 chr17 43619139 43619450 -45885103 - AluSx SINE Alu 0 312 1 205 285 77 62 chr17 43619450 43619568 -45884985 + L2 LINE L2 3173 3295 -18 232 370 102 15 chr17 43619588 43619991 -45884562 - L2 LINE L2 -625 2689 2252 211 229 170 130 chr17 43621716 43621939 -45882614 - MIR3 SINE MIR 0 262 31 284 233 164 0 chr17 43624025 43624098 -45880455 + L2 LINE L2 3185 3269 -3 267 380 16 16 chr17 43625351 43625480 -45879073 - MIR SINE MIR -63 145 17 207 324 48 29 chr17 43625899 43626004 -45878549 - L2 LINE L2 0 3313 3207 201 74 0 0 chr17 43627424 43627451 -45877102 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 434 241 174 29 chr17 43627740 43627947 -45876606 - MIR SINE MIR -6 256 20 2294 94 7 0 chr17 43628154 43628451 -45876102 + AluSp SINE Alu 1 299 -14 1311 125 47 148 chr17 43628471 43628830 -45875723 - MER7A DNA MER2_type -5 341 21 4950 104 32 10 chr17 43629492 43629851 -45874702 - L1PB1 LINE L1 -4 6147 5797 2408 93 3 0 chr17 43629851 43630152 -45874401 - AluSq SINE Alu -11 302 1 4950 104 32 10 chr17 43630152 43630573 -45873980 - L1PB1 LINE L1 -354 5797 5350 2339 88 0 33 chr17 43631559 43631865 -45872688 - AluSg SINE Alu -14 296 1 2306 112 0 3 chr17 43632539 43632853 -45871700 - AluSq SINE Alu 0 313 1 1012 239 27 31 chr17 43633031 43633290 -45871263 + MIR SINE MIR 2 259 -3 3648 172 14 1 chr17 43633409 43634185 -45870368 + L1MB1 LINE L1 5154 5942 -226 1827 178 0 3 chr17 43634191 43634503 -45870050 + L1MB1 LINE L1 5854 6166 -2 452 302 0 31 chr17 43634550 43634645 -45869908 + L1MC/D LINE L1 5511 5601 -2207 2315 109 0 0 chr17 43634645 43634938 -45869615 - AluSc SINE Alu -12 297 5 452 302 0 31 chr17 43634938 43635001 -45869552 + L1MC/D LINE L1 5601 5664 -2144 1789 149 13 55 chr17 43635398 43635706 -45868847 + AluSx SINE Alu 1 295 -17 227 235 88 118 chr17 43635887 43635989 -45868564 + L2 LINE L2 3197 3295 -18 304 312 0 0 chr17 43636843 43636920 -45867633 + MIR SINE MIR 46 122 -140 234 333 10 58 chr17 43638242 43638402 -45866151 - MIR SINE MIR -56 206 54 704 289 265 11 chr17 43638406 43638787 -45865766 - L2 LINE L2 -1 3312 2835 206 333 67 0 chr17 43641737 43641797 -45862756 - L2 LINE L2 -70 3202 3139 198 329 4 0 chr17 43641820 43641891 -45862662 - MIR SINE MIR -76 132 79 272 330 37 9 chr17 43643783 43643892 -45860661 - L2 LINE L2 0 3272 3161 358 253 75 87 chr17 43646686 43646927 -45857626 + L2 LINE L2 3027 3264 -8 919 210 82 10 chr17 43647035 43647230 -45857323 + MER63A DNA MER1_type 1 209 -1 751 148 0 191 chr17 43647770 43647938 -45856615 + MER5A DNA MER1_type 1 115 -74 2082 157 0 0 chr17 43647938 43648238 -45856315 - AluJb SINE Alu -12 300 1 751 148 0 191 chr17 43648238 43648299 -45856254 + MER5A DNA MER1_type 115 186 -3 331 131 49 0 chr17 43648440 43648501 -45856052 + LTR43 LTR ERV1 405 468 -134 225 0 0 0 chr17 43648509 43648534 -45856019 + (A)n Simple_repeat Simple_repeat 1 25 0 1876 174 0 7 chr17 43648534 43648833 -45855720 + AluSx SINE Alu 1 297 -15 761 194 14 0 chr17 43648833 43648977 -45855576 + MER5B DNA MER1_type 33 178 0 299 148 37 0 chr17 43649224 43649278 -45855275 + MER46C DNA MER2_type 14 69 -269 630 228 39 102 chr17 43649388 43649632 -45854921 + L1MA9 LINE L1 6016 6241 -71 2213 131 0 16 chr17 43649632 43649946 -45854607 - AluSx SINE Alu -3 309 1 630 228 39 102 chr17 43649946 43649986 -45854567 + L1MA9 LINE L1 6241 6282 -30 3665 47 0 0 chr17 43651623 43652066 -45852487 + L1PA6 LINE L1 5712 6154 0 2266 98 0 10 chr17 43652076 43652371 -45852182 + AluY SINE Alu 1 292 -19 1227 130 5 5 chr17 43653133 43653318 -45851235 - AluSx SINE Alu -127 185 1 185 327 18 0 chr17 43653777 43653832 -45850721 - L2 LINE L2 -8 3264 3209 339 274 0 20 chr17 43654669 43654771 -45849782 + AluJb SINE Alu 8 107 -195 401 289 21 0 chr17 43655059 43655156 -45849397 - MIR3 SINE MIR -42 166 68 180 0 0 0 chr17 43655775 43655795 -45848758 + (T)n Simple_repeat Simple_repeat 1 20 0 1412 106 0 5 chr17 43655808 43655996 -45848557 - U2 snRNA snRNA -1 187 1 1717 171 0 31 chr17 43657413 43657734 -45846819 + AluJb SINE Alu 1 311 -1 2026 207 5 0 chr17 43657734 43658126 -45846427 + MER63 DNA MER1_type 667 1060 0 977 144 0 24 chr17 43658662 43659030 -45845523 + (TGG)n Simple_repeat Simple_repeat 1 360 0 202 132 26 0 chr17 43659035 43659073 -45845480 + (ATGGTG)n Simple_repeat Simple_repeat 2 40 0 1782 154 30 10 chr17 43659177 43659545 -45845008 + LTR19A LTR ERV1 56 486 0 517 291 88 6 chr17 43659575 43659757 -45844796 + MIR SINE MIR 51 247 -15 478 322 30 20 chr17 43660512 43660711 -45843842 + MIR SINE MIR 62 262 0 256 340 41 10 chr17 43660717 43660814 -45843739 + MIR SINE MIR 136 235 -27 189 266 75 43 chr17 43661371 43661465 -45843088 + L2 LINE L2 3210 3306 -7 339 318 24 52 chr17 43661960 43662171 -45842382 + L2 LINE L2 2691 2895 -419 573 290 108 9 chr17 43662377 43662591 -45841962 + MIR SINE MIR 13 247 -15 799 230 34 0 chr17 43662789 43662967 -45841586 + MIR SINE MIR 16 199 -63 237 266 16 0 chr17 43663001 43663065 -45841488 + L2 LINE L2 3249 3313 0 331 278 11 11 chr17 43663788 43663892 -45840661 - MIR SINE MIR -82 126 22 236 269 15 15 chr17 43664026 43664093 -45840460 + L2 LINE L2 3206 3272 0 445 349 20 15 chr17 43665793 43665988 -45838565 - MIR3 SINE MIR -10 198 3 197 32 0 32 chr17 43666970 43667001 -45837552 + (CCA)n Simple_repeat Simple_repeat 1 30 0 1242 219 128 38 chr17 43667928 43667986 -45836567 - MLT1C LTR MaLR -3 464 413 2174 113 0 0 chr17 43667986 43668286 -45836267 + AluSx SINE Alu 1 300 -12 1242 219 128 38 chr17 43668286 43668648 -45835905 - MLT1C LTR MaLR -54 413 6 1788 141 41 0 chr17 43668860 43669150 -45835403 - AluJo SINE Alu -10 302 1 204 398 0 29 chr17 43670342 43670445 -45834108 + MIR SINE MIR 44 143 -65 231 267 0 0 chr17 43672070 43672145 -45832408 + (CCA)n Simple_repeat Simple_repeat 1 75 0 588 234 71 10 chr17 43672438 43672635 -45831918 + L2 LINE L2 2904 3112 -201 435 274 125 47 chr17 43675506 43675827 -45828726 - HAL1 LINE L1 -1522 985 640 2295 74 0 3 chr17 43676176 43676473 -45828080 - AluY SINE Alu -15 296 1 2663 151 15 63 chr17 43676806 43677013 -45827540 + Tigger1 DNA MER2_type 1 216 -2202 2127 100 20 3 chr17 43677013 43677312 -45827241 - AluSx SINE Alu -8 304 1 2663 151 15 63 chr17 43677312 43677646 -45826907 + Tigger1 DNA MER2_type 216 516 -1902 9105 117 15 2 chr17 43677646 43679024 -45825529 + Tigger1 DNA MER2_type 1023 2418 0 486 225 17 50 chr17 43679035 43679155 -45825398 - MER5A DNA MER1_type -13 176 61 23 33 0 0 chr17 43679155 43679185 -45825368 + AT_rich Low_complexity Low_complexity 1 30 0 1481 30 0 0 chr17 43679267 43679436 -45825117 - L1PA3 LINE L1 0 6155 5987 297 0 0 0 chr17 43679436 43679474 -45825079 + L1PA3 LINE L1 5940 5977 -178 1377 57 0 23 chr17 43679474 43679651 -45824902 - L1PA8 LINE L1 -3 6169 5997 289 270 149 7 chr17 43680114 43680262 -45824291 + MIR3 SINE MIR 33 201 -7 393 276 39 0 chr17 43680341 43680468 -45824085 + MIR SINE MIR 20 151 -111 229 263 62 12 chr17 43680984 43681064 -45823489 - MIR SINE MIR -103 105 22 374 278 70 0 chr17 43682852 43682967 -45821586 + MIR SINE MIR 88 210 -52 396 310 82 12 chr17 43683768 43683939 -45820614 + MIR SINE MIR 8 190 -72 501 241 0 88 chr17 43685715 43685786 -45818767 + MER5B DNA MER1_type 54 109 -69 2120 108 0 7 chr17 43685786 43686083 -45818470 - AluSx SINE Alu -17 295 1 501 241 0 88 chr17 43686083 43686148 -45818405 + MER5B DNA MER1_type 109 178 0 261 241 0 0 chr17 43686263 43686329 -45818224 + MIR SINE MIR 63 129 -79 240 242 242 40 chr17 43687103 43687202 -45817351 + L2 LINE L2 3180 3298 -15 222 408 117 0 chr17 43687221 43687417 -45817136 - L2 LINE L2 -610 2704 2486 717 316 48 29 chr17 43687531 43687841 -45816712 - MER102b DNA MER1_type -14 327 12 235 329 73 13 chr17 43688147 43688381 -45816172 - L2 LINE L2 -262 3051 2804 195 42 0 0 chr17 43688405 43688429 -45816124 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 2133 72 7 10 chr17 43688431 43688722 -45815831 - L1PA8 LINE L1 -26 6146 5857 536 304 25 17 chr17 43688722 43688959 -45815594 - L2 LINE L2 -529 2785 2547 200 344 11 54 chr17 43689674 43689767 -45814786 + MIR SINE MIR 34 122 -86 242 184 20 0 chr17 43689823 43689872 -45814681 + MER103 DNA DNA 3 52 -114 301 227 58 117 chr17 43689931 43690085 -45814468 - MIR SINE MIR 0 262 118 503 252 75 0 chr17 43690721 43690897 -45813656 + MIR SINE MIR 31 222 -40 195 246 58 0 chr17 43691487 43691556 -45812997 - MIR3 SINE MIR -41 167 95 184 222 130 0 chr17 43691976 43692030 -45812523 + MIR SINE MIR 92 152 -110 2236 78 17 0 chr17 43692502 43692798 -45811755 + AluSx SINE Alu 1 301 -11 1745 108 0 4 chr17 43693674 43693923 -45810630 - AluSq SINE Alu -65 248 1 1692 207 42 88 chr17 43693924 43694500 -45810053 - L1MC4 LINE L1 -282 7760 7212 2015 111 19 91 chr17 43694684 43695046 -45809507 - MER1B DNA MER1_type 0 337 2 322 226 65 10 chr17 43696162 43696295 -45808258 - MIR3 SINE MIR -17 191 44 367 267 26 9 chr17 43696680 43696796 -45807757 + GA-rich Low_complexity Low_complexity 3 120 0 452 156 11 0 chr17 43696807 43696897 -45807656 + (TGGA)n Simple_repeat Simple_repeat 2 92 0 247 363 22 0 chr17 43696916 43697051 -45807502 + (TGGA)n Simple_repeat Simple_repeat 1 138 0 317 341 35 22 chr17 43697052 43697278 -45807275 - L2 LINE L2 -173 3099 2871 382 286 123 0 chr17 43697359 43697530 -45807023 - L2 LINE L2 -541 2773 2582 469 365 54 5 chr17 43698182 43698404 -45806149 + MIR SINE MIR 20 252 -10 228 368 133 0 chr17 43699786 43699952 -45804601 - MIR3 SINE MIR -4 204 17 1034 195 18 23 chr17 43699957 43700178 -45804375 - MER58A DNA MER1_type -4 220 1 210 143 0 0 chr17 43700411 43700446 -45804107 + (CTG)n Simple_repeat Simple_repeat 1 35 0 601 318 64 9 chr17 43700553 43700786 -45803767 - MIR SINE MIR -5 257 12 2155 120 0 16 chr17 43700962 43701278 -45803275 + AluSx SINE Alu 1 311 -1 471 306 20 41 chr17 43702463 43702648 -45801905 + MIR3 SINE MIR 16 198 -10 472 271 122 11 chr17 43702648 43702836 -45801717 + MER3 DNA MER1_type 1 209 0 2174 116 0 3 chr17 43704396 43704706 -45799847 + AluSx SINE Alu 1 309 -3 491 60 0 72 chr17 43704736 43704819 -45799734 + AluJ/FRAM SINE Alu 221 297 -15 234 219 16 0 chr17 43704915 43704979 -45799574 + MER112 DNA MER1_type 105 169 -91 2441 45 0 22 chr17 43704995 43705309 -45799244 + AluY SINE Alu 1 307 -4 225 289 190 21 chr17 43705462 43705604 -45798949 + MIR SINE MIR 85 250 -12 319 290 51 53 chr17 43707837 43708029 -45796524 - MIR SINE MIR -56 206 15 192 152 0 0 chr17 43708060 43708093 -45796460 - L2 LINE L2 -12 3301 3269 * 594 259 72 0 chr17 43708091 43708257 -45796296 - MIR SINE MIR -72 190 13 254 225 12 88 chr17 43711695 43711775 -45792778 - MIR SINE MIR -60 148 75 278 67 22 0 chr17 43718024 43718069 -45786484 + (TC)n Simple_repeat Simple_repeat 2 47 0 839 159 8 0 chr17 43718079 43718211 -45786342 - FLAM_A SINE Alu 0 133 1 249 308 166 47 chr17 43718745 43718914 -45785639 - MER5A DNA MER1_type 0 189 1 307 330 109 24 chr17 43719246 43719416 -45785137 + MIR3 SINE MIR 8 188 -20 480 320 40 13 chr17 43719956 43720106 -45784447 + MIR3 SINE MIR 33 185 -42 236 287 0 0 chr17 43720507 43720594 -45783959 + (CCA)n Simple_repeat Simple_repeat 1 87 0 475 256 27 78 chr17 43721593 43721812 -45782741 + MIR SINE MIR 21 228 -34 189 289 0 0 chr17 43722474 43722519 -45782034 + MIR SINE MIR 211 255 -7 180 0 0 0 chr17 43723976 43723996 -45780557 + (T)n Simple_repeat Simple_repeat 1 20 0 249 169 0 0 chr17 43724522 43724581 -45779972 + GA-rich Low_complexity Low_complexity 1 59 0 270 0 0 0 chr17 43724620 43724650 -45779903 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 485 327 25 30 chr17 43724809 43725011 -45779542 + MIR SINE MIR 30 230 -32 236 296 28 0 chr17 43725225 43725296 -45779257 - MIR SINE MIR -28 234 162 2271 105 0 0 chr17 43725303 43725608 -45778945 - AluSx SINE Alu -7 305 1 589 297 137 50 chr17 43725653 43726017 -45778536 + L2 LINE L2 2857 3252 -20 297 283 124 9 chr17 43726036 43726149 -45778404 - MIR SINE MIR -130 132 7 2161 78 0 34 chr17 43727225 43727519 -45777034 - AluY SINE Alu -14 297 14 797 264 107 3 chr17 43728358 43728686 -45775867 + MER113 DNA MER1_type? 51 420 -101 1885 147 14 14 chr17 43728686 43728999 -45775554 + AluJb SINE Alu 1 312 0 797 264 107 3 chr17 43728999 43729026 -45775527 + MER113 DNA MER1_type? 420 443 -78 1920 142 0 7 chr17 43729039 43729335 -45775218 - AluSx SINE Alu -18 294 1 205 293 200 0 chr17 43729914 43730139 -45774414 - L2 LINE L2 -445 2869 2600 487 266 35 46 chr17 43730200 43730373 -45774180 - MIR SINE MIR -79 183 13 2667 176 45 10 chr17 43731261 43731749 -45772804 + MLT1D LTR MaLR 1 505 0 470 266 110 25 chr17 43731981 43732218 -45772335 + LTR33 LTR ERVL 30 286 -235 376 206 180 4 chr17 43733068 43733231 -45771322 - MIR SINE MIR -32 230 35 233 330 85 34 chr17 43733283 43733459 -45771094 + MIR SINE MIR 4 188 -74 255 282 55 36 chr17 43733935 43734045 -45770508 + MIR3 SINE MIR 12 123 -85 228 178 22 0 chr17 43734304 43734349 -45770204 + GA-rich Low_complexity Low_complexity 2 47 0 364 323 138 18 chr17 43734747 43734964 -45769589 + MIR SINE MIR 20 262 0 319 173 0 7 chr17 43735505 43735576 -45768977 + Alu SINE Alu 1 53 -247 438 53 0 0 chr17 43735766 43735823 -45768730 + AluSq/x SINE Alu 77 133 -179 1980 134 3 13 chr17 43735826 43736131 -45768422 + AluSx SINE Alu 1 302 -10 191 339 0 0 chr17 43736550 43736615 -45767938 - MIR SINE MIR -74 134 70 222 218 18 18 chr17 43736743 43736798 -45767755 + MIR SINE MIR 98 152 -110 418 288 40 131 chr17 43737385 43737526 -45767027 + L2 LINE L2 2838 2990 -282 306 87 0 0 chr17 43737526 43737572 -45766981 + (CA)n Simple_repeat Simple_repeat 2 47 0 418 288 40 131 chr17 43737572 43737903 -45766650 + L2 LINE L2 2990 3267 -5 442 274 72 7 chr17 43738525 43738678 -45765875 + MIR SINE MIR 76 238 -24 413 314 52 48 chr17 43738663 43738892 -45765661 + L2 LINE L2 3030 3259 -13 * 315 0 0 0 chr17 43738892 43738927 -45765626 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 1691 177 6 37 chr17 43739551 43739873 -45764680 - AluJo SINE Alu 0 312 1 544 269 0 8 chr17 43739973 43740107 -45764446 + MIR SINE MIR 21 153 -109 673 265 38 63 chr17 43740115 43740353 -45764200 + MIR SINE MIR 31 262 0 529 335 123 3 chr17 43740360 43740644 -45763909 + LTR67 LTR ERVL 1 318 -239 362 236 118 35 chr17 43740685 43740829 -45763724 + LTR67 LTR ERVL 402 557 0 674 258 146 0 chr17 43740873 43741106 -45763447 + L2 LINE L2 2304 2570 -744 729 251 110 45 chr17 43741304 43741767 -45762786 + LTR1B LTR ERV1 33 525 -301 1458 101 9 0 chr17 43742005 43742222 -45762331 + AluSg/x SINE Alu 92 310 0 806 260 29 62 chr17 43742273 43742581 -45761972 + L2 LINE L2 3011 3308 -5 270 343 5 40 chr17 43743356 43743554 -45760999 + HERVL LTR ERVL 1209 1399 -4255 2272 115 0 0 chr17 43743752 43744064 -45760489 - AluSx SINE Alu 0 312 1 260 254 64 0 chr17 43744064 43744174 -45760379 - LTR67 LTR ERVL -10 547 431 443 176 29 81 chr17 43744712 43744848 -45759705 + LTR1B LTR ERV1 397 525 -301 339 386 11 5 chr17 43744848 43745032 -45759521 + HERVL LTR ERVL 1863 2047 -2949 319 345 77 47 chr17 43745055 43745498 -45759055 + LTR67 LTR ERVL 102 557 0 357 256 12 0 chr17 43745498 43745584 -45758969 + HERVL LTR ERVL 2029 2115 -3539 1730 198 28 52 chr17 43745687 43745933 -45758620 + Tigger7 DNA MER2_type 136 386 -2201 2110 112 7 0 chr17 43745933 43746229 -45758324 - AluSp SINE Alu -15 298 1 1730 198 28 52 chr17 43746229 43746572 -45757981 + Tigger7 DNA MER2_type 386 2587 0 469 325 24 37 chr17 43746579 43746825 -45757728 - LTR67 LTR ERVL -99 458 216 477 248 57 28 chr17 43746886 43747027 -45757526 - LTR67 LTR ERVL -369 188 44 2084 131 3 3 chr17 43747044 43747356 -45757197 + AluSx SINE Alu 1 312 0 465 215 19 0 chr17 43747640 43747747 -45756806 + MLT1G LTR MaLR 1 109 -486 1443 216 92 34 chr17 43747871 43748282 -45756271 - MLT1E3 LTR MaLR -189 435 1 836 248 212 16 chr17 43748282 43748726 -45755827 + MLT1G LTR MaLR 60 590 0 22 0 0 0 chr17 43748843 43748865 -45755688 + AT_rich Low_complexity Low_complexity 1 22 0 1300 210 184 13 chr17 43748943 43749410 -45755143 + MLT1H LTR MaLR 1 547 -2 1531 166 4 54 chr17 43749455 43749733 -45754820 - AluJo SINE Alu -44 268 5 420 20 0 0 chr17 43751440 43751489 -45753064 + (CA)n Simple_repeat Simple_repeat 2 50 0 191 253 217 0 chr17 43751509 43751592 -45752961 - L2 LINE L2 -36 3236 3136 194 307 0 107 chr17 43751668 43751808 -45752745 + L2 LINE L2 3147 3271 -1 232 316 0 0 chr17 43751833 43751932 -45752621 + GA-rich Low_complexity Low_complexity 1 99 0 243 336 23 38 chr17 43753098 43753229 -45751324 - L2 LINE L2 -212 3060 2932 222 247 0 0 chr17 43753361 43753438 -45751115 + (TGGA)n Simple_repeat Simple_repeat 1 77 0 332 284 0 33 chr17 43754085 43754268 -45750285 + (CCA)n Simple_repeat Simple_repeat 2 178 0 218 371 19 13 chr17 43754957 43755116 -45749437 + C-rich Low_complexity Low_complexity 2 161 0 213 402 10 0 chr17 43755559 43755656 -45748897 + L3 LINE CR1 1353 1450 -127 198 337 53 68 chr17 43756013 43756203 -45748350 - MIR3 SINE MIR -11 197 11 * 366 261 72 61 chr17 43756146 43756349 -45748204 + MIR SINE MIR 45 255 -7 507 232 27 9 chr17 43757393 43757505 -45747048 - MER81 DNA DNA 0 114 1 360 361 66 0 chr17 43757746 43757912 -45746641 - MIR SINE MIR -2 260 84 198 284 126 11 chr17 43758008 43758103 -45746450 - MIR SINE MIR -67 141 36 2307 69 0 54 chr17 43758519 43758836 -45745717 - AluY SINE Alu -11 300 1 209 200 0 19 chr17 43758836 43758889 -45745664 - MIR SINE MIR -62 146 101 200 241 92 35 chr17 43760159 43760246 -45744307 - L3 LINE CR1 -101 1476 1385 265 268 49 0 chr17 43760649 43760731 -45743822 - MIR SINE MIR -117 145 60 247 121 35 0 chr17 43760925 43760983 -45743570 + GA-rich Low_complexity Low_complexity 2 61 0 386 306 40 30 chr17 43760983 43761182 -45743371 + MIR3 SINE MIR 6 206 -2 262 282 137 48 chr17 43763568 43763692 -45740861 + MIR SINE MIR 47 181 -81 611 236 6 25 chr17 43763780 43763941 -45740612 + MIR SINE MIR 81 238 -24 455 313 77 6 chr17 43764706 43764937 -45739616 + MIR SINE MIR 5 252 -10 550 288 98 7 chr17 43766116 43766350 -45738203 - MIR SINE MIR -6 256 2 372 300 34 26 chr17 43766378 43766546 -45738007 + MIR SINE MIR 30 192 -56 486 0 0 0 chr17 43766593 43766647 -45737906 + (TTAGG)n Simple_repeat Simple_repeat 4 57 0 1107 159 41 55 chr17 43767475 43767695 -45736858 - MER20 DNA MER1_type -2 217 1 186 364 68 0 chr17 43768306 43768394 -45736159 + MIR SINE MIR 96 189 -73 2121 92 23 7 chr17 43769720 43770026 -45734527 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 43770155 43770177 -45734376 + (TTG)n Simple_repeat Simple_repeat 2 23 0 2231 116 0 0 chr17 43771887 43772189 -45732364 + AluSx SINE Alu 1 302 -10 317 292 52 10 chr17 43773062 43773158 -45731395 + MIR SINE MIR 92 191 -71 422 188 289 0 chr17 43774154 43774282 -45730271 - MIR SINE MIR -14 248 84 339 343 37 0 chr17 43774477 43774585 -45729968 + L2 LINE L2 3198 3309 -4 363 409 105 51 chr17 43775342 43776228 -45728325 - L2 LINE L2 -337 2977 2044 203 137 196 0 chr17 43778135 43778186 -45726367 + MIR3 SINE MIR 129 189 -19 1437 99 30 43 chr17 43779621 43779854 -45724699 + MER30 DNA MER1_type 1 230 0 364 299 62 14 chr17 43779904 43780048 -45724505 + MIR3 SINE MIR 46 196 -12 289 317 0 0 chr17 43781121 43781263 -45723290 + (CCA)n Simple_repeat Simple_repeat 3 144 0 210 296 74 19 chr17 43782043 43782151 -45722402 - MIR3 SINE MIR -10 198 85 * 492 284 14 7 chr17 43782145 43782286 -45722267 - MIR SINE MIR -1 261 120 541 223 89 55 chr17 43782349 43782551 -45722002 - L1ME3 LINE L1 -8 6154 5946 926 193 76 0 chr17 43782551 43782748 -45721805 + MER20 DNA MER1_type 1 212 -7 234 0 0 0 chr17 43783472 43783498 -45721055 + (TC)n Simple_repeat Simple_repeat 2 27 0 295 297 7 0 chr17 43784106 43784208 -45720345 - MIR SINE MIR -42 166 62 1795 232 111 63 chr17 43784337 43785040 -45719513 + MER21B LTR ERV1 19 755 -108 440 267 173 0 chr17 43785147 43785297 -45719256 - MIR SINE MIR 0 262 87 253 268 0 0 chr17 43785476 43785532 -45719021 - MIR3 SINE MIR -40 168 113 433 285 18 17 chr17 43786083 43786234 -45718319 + MIR SINE MIR 23 176 -32 208 361 0 14 chr17 43786264 43786336 -45718217 - MIR SINE MIR -98 164 94 203 286 286 0 chr17 43786831 43786915 -45717638 - L2 LINE L2 -1 3312 3205 303 294 18 28 chr17 43786952 43787061 -45717492 - MIR3 SINE MIR -32 176 69 279 385 15 8 chr17 43787732 43787846 -45716707 + L3b LINE CR1 1331 1448 -135 757 163 7 22 chr17 43787846 43787981 -45716572 + FLAM_A SINE Alu 1 133 0 279 385 15 8 chr17 43787981 43787996 -45716557 + L3b LINE CR1 1448 1461 -122 560 345 31 5 chr17 43788060 43788283 -45716270 + MIR SINE MIR 21 249 -13 432 299 48 30 chr17 43789067 43789234 -45715319 + MIR SINE MIR 23 192 -70 2225 75 0 0 chr17 43790722 43791024 -45713529 - AluSx SINE Alu 0 308 7 335 287 120 7 chr17 43791087 43791237 -45713316 - MIR3 SINE MIR -35 173 7 215 348 155 6 chr17 43793436 43793597 -45710956 - MIR3 SINE MIR -1 207 23 774 238 0 35 chr17 43793750 43793922 -45710631 - FRAM SINE Alu 0 166 1 286 264 0 0 chr17 43794394 43794485 -45710068 + (CCA)n Simple_repeat Simple_repeat 1 91 0 384 22 0 0 chr17 43795210 43795255 -45709298 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 219 303 45 22 chr17 43795986 43796075 -45708478 + MIR SINE MIR 5 95 -167 271 281 124 0 chr17 43796075 43796164 -45708389 + MIR SINE MIR 46 145 -117 401 318 73 6 chr17 43796478 43796648 -45707905 - MIR SINE MIR -50 212 31 200 314 59 20 chr17 43797332 43797434 -45707119 + MIR SINE MIR 80 185 -77 367 364 8 8 chr17 43797507 43797639 -45706914 + MIR3 SINE MIR 12 143 -65 3147 259 89 42 chr17 43797806 43798073 -45706480 + HAL1 LINE L1 102 355 -2152 2304 91 0 0 chr17 43798073 43798370 -45706183 + AluY SINE Alu 1 297 -14 3147 259 89 42 chr17 43798370 43799044 -45705509 + HAL1 LINE L1 355 996 -1511 1869 166 0 0 chr17 43799044 43799334 -45705219 - AluJb SINE Alu -22 290 1 3147 259 89 42 chr17 43799334 43800054 -45704499 + HAL1 LINE L1 996 1842 -665 2230 128 0 0 chr17 43800500 43800812 -45703741 - AluSx SINE Alu 0 312 1 2244 107 0 3 chr17 43801934 43802244 -45702309 + AluSx SINE Alu 1 309 -3 253 212 10 10 chr17 43802397 43802496 -45702057 + (CA)n Simple_repeat Simple_repeat 1 99 0 220 336 42 42 chr17 43802602 43802721 -45701832 - MIR3 SINE MIR -49 159 41 509 361 80 4 chr17 43803022 43803260 -45701293 - MIR SINE MIR 0 262 7 327 236 9 82 chr17 43803734 43803844 -45700709 + MER5A DNA MER1_type 87 188 -1 862 141 19 0 chr17 43804112 43804268 -45700285 - LTR40a LTR ERVL 0 519 361 205 245 61 0 chr17 43804279 43804328 -45700225 + MIR SINE MIR 49 100 -162 1099 256 14 67 chr17 43804337 43804693 -45699860 - LTR40a LTR ERVL -178 341 5 712 259 61 45 chr17 43804893 43805159 -45699394 + L1MC4a LINE L1 5220 5495 -844 2180 110 0 0 chr17 43805159 43805460 -45699093 + AluY SINE Alu 1 301 -10 712 259 61 45 chr17 43805460 43805564 -45698989 + L1MC4a LINE L1 5495 5596 -743 1111 135 0 0 chr17 43805568 43805724 -45698829 + FRAM SINE Alu 1 155 -21 683 279 25 29 chr17 43805738 43806054 -45698499 + L1MC4a LINE L1 5610 5924 -1884 365 198 103 16 chr17 44006235 44006361 -45498192 - L2 LINE L2 -612 2702 2566 2171 122 0 0 chr17 44006462 44006756 -45497797 - AluSx SINE Alu -18 294 1 231 321 4 35 chr17 44006910 44007043 -45497510 + MIR SINE MIR 60 146 -62 2488 95 0 0 chr17 44007094 44007400 -45497153 - AluSq SINE Alu -7 306 1 671 184 6 58 chr17 44007408 44007480 -45497073 - L1MA10 LINE L1 -1 6333 6259 2310 110 3 0 chr17 44007480 44007779 -45496774 - AluSp SINE Alu -13 300 1 671 184 6 58 chr17 44007779 44007880 -45496673 - L1MA10 LINE L1 -75 6259 6169 554 215 60 27 chr17 44007947 44008096 -45496457 - FRAM SINE Alu -12 154 1 187 153 35 49 chr17 44008345 44008489 -45496064 + C-rich Low_complexity Low_complexity 3 144 0 180 161 0 0 chr17 44008654 44008685 -45495868 + MIR SINE MIR 124 154 -108 2014 143 20 3 chr17 44008689 44008990 -45495563 - AluJb SINE Alu -5 307 2 554 225 236 0 chr17 44009110 44009288 -45495265 - MIR SINE MIR -28 234 15 2310 95 7 13 chr17 44009544 44009848 -45494705 + AluY SINE Alu 1 302 -9 290 302 23 0 chr17 44010020 44010106 -45494447 + CT-rich Low_complexity Low_complexity 3 90 0 270 116 0 0 chr17 44010123 44010166 -45494387 + (C)n Simple_repeat Simple_repeat 1 43 0 231 321 15 22 chr17 44010220 44010354 -45494199 + C-rich Low_complexity Low_complexity 1 133 0 225 154 0 0 chr17 44010433 44010472 -45494081 + T-rich Low_complexity Low_complexity 1 39 0 2507 92 0 0 chr17 44010778 44011082 -45493471 - AluSg SINE Alu -6 304 1 1408 130 43 87 chr17 44012038 44012129 -45492424 + AluJb SINE Alu 35 128 -184 2325 97 17 0 chr17 44012129 44012427 -45492126 + AluSx SINE Alu 1 303 -9 1408 130 43 87 chr17 44012427 44012611 -45491942 + AluJb SINE Alu 128 298 -14 1657 134 9 0 chr17 44012699 44012930 -45491623 + AluSx SINE Alu 6 238 -74 2303 84 27 0 chr17 44014521 44014818 -45489735 - AluSg SINE Alu -5 305 1 1760 173 35 0 chr17 44015222 44015505 -45489048 - AluJo SINE Alu -19 293 1 246 160 0 0 chr17 44015576 44015626 -45488927 + T-rich Low_complexity Low_complexity 1 50 0 2187 121 3 0 chr17 44015643 44015941 -45488612 - AluSx SINE Alu -12 300 2 2285 109 0 0 chr17 44015950 44016243 -45488310 - AluSg SINE Alu -17 293 1 1081 126 25 15 chr17 44016512 44016711 -45487842 - L1MD2 LINE L1 -3 6356 6156 189 0 0 0 chr17 44016715 44016736 -45487817 + (TG)n Simple_repeat Simple_repeat 1 21 0 275 331 36 16 chr17 44016991 44017172 -45487381 - MIR SINE MIR -56 206 20 2277 79 40 0 chr17 44018652 44018930 -45485623 + AluSc SINE Alu 1 289 -20 955 156 6 12 chr17 44018930 44019089 -45485464 - AluJo/FRAM SINE Alu -6 296 137 2113 122 3 10 chr17 44019260 44019563 -45484990 - AluJb SINE Alu -11 301 1 203 152 65 0 chr17 44019779 44019825 -45484728 + C-rich Low_complexity Low_complexity 4 52 0 242 156 67 0 chr17 44021291 44021336 -45483217 - MIR SINE MIR -151 111 64 1900 168 0 10 chr17 44021336 44021640 -45482913 - AluJo SINE Alu -11 301 1 288 0 0 0 chr17 44021678 44021710 -45482843 + (TG)n Simple_repeat Simple_repeat 2 33 0 733 124 41 16 chr17 44021711 44021832 -45482721 - AluSg/x SINE Alu -19 293 170 186 111 28 0 chr17 44023308 44023344 -45481209 - L2 LINE L2 0 3313 3277 1803 113 91 4 chr17 44023635 44023910 -45480643 - AluSx SINE Alu -13 299 1 377 252 27 34 chr17 44023914 44024116 -45480437 - AluSc SINE Alu -7 292 177 185 0 40 0 chr17 44024618 44024643 -45479910 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 863 191 0 0 chr17 44024649 44024790 -45479763 - FRAM SINE Alu -33 143 3 23 0 0 0 chr17 44025010 44025033 -45479520 + AT_rich Low_complexity Low_complexity 1 23 0 975 176 171 29 chr17 44025063 44025107 -45479446 + AluJo SINE Alu 1 37 -275 1371 169 188 16 chr17 44025107 44025491 -45479062 - LTR7 LTR ERV1 0 450 1 975 176 171 29 chr17 44025491 44025651 -45478902 + AluJo SINE Alu 37 234 -78 1450 154 4 17 chr17 44025651 44025721 -45478832 + AluSg/x SINE Alu 67 136 -176 1988 112 11 0 chr17 44025721 44025981 -45478572 + AluSp SINE Alu 39 301 -12 1450 154 4 17 chr17 44025981 44026143 -45478410 + AluSg/x SINE Alu 136 296 -16 504 32 0 0 chr17 44026149 44026211 -45478342 + (CA)n Simple_repeat Simple_repeat 2 63 0 2037 134 7 3 chr17 44026273 44026565 -45477988 + AluSx SINE Alu 1 293 -19 258 321 104 0 chr17 44026624 44026730 -45477823 - L1MC/D LINE L1 -2150 5658 5542 323 301 109 13 chr17 44026934 44027090 -45477463 + MIR SINE MIR 4 174 -88 2605 61 0 3 chr17 44027552 44027864 -45476689 - AluY SINE Alu 0 311 1 1758 163 10 7 chr17 44027920 44028208 -45476345 + AluJo SINE Alu 1 289 -23 24 20 0 60 chr17 44029443 44029493 -45475060 + AT_rich Low_complexity Low_complexity 1 47 0 2227 100 31 3 chr17 44031810 44032099 -45472454 - AluSx SINE Alu -15 297 1 1937 121 0 15 chr17 44032103 44032375 -45472178 - AluSx SINE Alu -15 297 30 1120 111 0 0 chr17 44032490 44032643 -45471910 + AluSg/x SINE Alu 153 305 -5 2230 94 7 0 chr17 44032648 44032971 -45471582 + AluSq SINE Alu 1 325 0 2442 90 6 0 chr17 44032971 44033282 -45471271 + AluSp SINE Alu 1 313 0 1905 155 24 3 chr17 44033438 44033734 -45470819 - AluJb SINE Alu 0 312 11 2001 116 25 7 chr17 44033788 44034064 -45470489 - AluSx SINE Alu -26 286 6 2321 91 0 3 chr17 44034793 44035107 -45469446 - AluSq SINE Alu 0 313 1 2376 92 0 0 chr17 44035110 44035403 -45469150 - AluSx SINE Alu -19 293 1 404 188 0 12 chr17 44035424 44035504 -45469049 - MIR SINE MIR -94 168 90 1967 141 28 3 chr17 44035519 44035809 -45468744 - AluSx SINE Alu -15 297 1 1861 171 10 3 chr17 44035831 44036140 -45468413 - AluJb SINE Alu -1 311 1 2130 117 0 0 chr17 44036153 44036462 -45468091 - AluSg SINE Alu 0 309 1 2326 91 13 0 chr17 44036747 44037045 -45467508 + AluSp SINE Alu 1 302 -11 1081 177 0 27 chr17 44037425 44037611 -45466942 + AluJb SINE Alu 85 265 -47 1476 203 196 30 chr17 44037611 44037733 -45466820 - MER50 LTR ERV1 0 734 634 2356 85 0 7 chr17 44037733 44038026 -45466527 + AluSx SINE Alu 1 291 -21 1476 203 196 30 chr17 44038026 44038332 -45466221 - MER50 LTR ERV1 -100 634 235 1886 135 4 0 chr17 44038435 44038702 -45465851 - AluSx SINE Alu -5 307 40 2385 101 0 3 chr17 44038736 44039034 -45465519 + AluSg SINE Alu 1 297 -13 1297 121 0 0 chr17 44039034 44039207 -45465346 + AluSg/x SINE Alu 134 306 -6 2203 89 0 14 chr17 44039624 44039944 -45464609 + AluSg SINE Alu 1 310 0 290 273 31 75 chr17 44041235 44041396 -45463157 + MIR SINE MIR 28 181 -81 562 160 0 0 chr17 44041401 44041495 -45463058 - FRAM SINE Alu -10 166 73 2423 74 6 10 chr17 44042424 44042736 -45461817 - AluSq SINE Alu -2 311 1 2049 128 0 3 chr17 44043096 44043378 -45461175 - AluSx SINE Alu -26 286 6 833 103 0 0 chr17 44043447 44043590 -45460963 - AluSc SINE Alu 0 318 176 2239 98 3 7 chr17 44043614 44043910 -45460643 - AluSp SINE Alu -16 297 3 430 263 68 0 chr17 44043916 44044049 -45460504 - MIR SINE MIR -117 145 4 1644 186 0 61 chr17 44044074 44044402 -45460151 - AluJo SINE Alu 0 312 5 285 167 0 24 chr17 44044798 44044859 -45459694 + AluSp/q SINE Alu 206 250 -53 1005 138 0 69 chr17 44044859 44044920 -45459633 + AluSq SINE Alu 85 149 -164 2366 80 0 3 chr17 44044920 44045206 -45459347 + AluSq SINE Alu 11 295 -18 1005 138 0 69 chr17 44045206 44045333 -45459220 + AluSq SINE Alu 149 260 -53 2273 117 0 3 chr17 44045516 44045815 -45458738 + AluSq SINE Alu 1 298 -15 11330 31 4 93 chr17 44045856 44047375 -45457178 + SVA Other Other 3 1386 0 2469 74 0 7 chr17 44047595 44047892 -45456661 - AluSq SINE Alu -18 295 1 706 160 0 23 chr17 44047893 44048024 -45456529 - FRAM SINE Alu -8 168 41 2995 81 24 7 chr17 44048027 44048447 -45456106 + MLT2A1 LTR ERVL 18 444 0 700 268 16 16 chr17 44049441 44049631 -45454922 - MIR SINE MIR -44 218 29 1790 87 0 0 chr17 44049636 44049855 -45454698 - AluSq SINE Alu -94 219 1 854 204 0 19 chr17 44049863 44050020 -45454533 - AluJb SINE Alu -10 302 149 382 93 0 0 chr17 44050020 44050074 -45454479 + AluSp/q SINE Alu 207 260 -43 24 0 0 0 chr17 44050496 44050520 -45454033 + GC_rich Low_complexity Low_complexity 1 24 0 2020 128 34 3 chr17 44051632 44051928 -45452625 + AluSx SINE Alu 1 305 -7 1214 179 67 44 chr17 44051939 44052086 -45452467 + AluSq SINE Alu 1 143 -170 1599 88 4 40 chr17 44052086 44052313 -45452240 + AluSq SINE Alu 1 219 -94 1214 179 67 44 chr17 44052313 44052462 -45452091 + AluSq SINE Alu 143 304 -9 1223 150 72 101 chr17 44052466 44052611 -45451942 + AluJo SINE Alu 2 150 -196 227 27 0 54 chr17 44052611 44052648 -45451905 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1223 150 72 101 chr17 44052648 44052856 -45451697 + AluJo SINE Alu 150 346 0 589 192 56 0 chr17 44052867 44052992 -45451561 + FLAM_C SINE Alu 1 132 -1 1375 177 22 0 chr17 44053002 44053228 -45451325 + AluJo SINE Alu 1 231 -81 1428 133 137 8 chr17 44053232 44053411 -45451142 + AluJb SINE Alu 5 230 -72 2199 88 27 10 chr17 44053411 44053707 -45450846 + AluSc SINE Alu 1 301 -8 1428 133 137 8 chr17 44053707 44053790 -45450763 + AluJb SINE Alu 230 301 -1 473 235 98 13 chr17 44053802 44053955 -45450598 + L1ME3 LINE L1 5508 5673 -2135 436 255 0 19 chr17 44053957 44054063 -45450490 + L2 LINE L2 3207 3310 -3 920 134 8 8 chr17 44054364 44054498 -45450055 + AluSq/x SINE Alu 1 134 -178 222 175 0 0 chr17 44054692 44054732 -45449821 - L2 LINE L2 -9 3304 3265 637 157 0 10 chr17 44054876 44054978 -45449575 - AluJ/FLAM SINE Alu -210 102 2 288 0 0 0 chr17 44055017 44055049 -45449504 + (TG)n Simple_repeat Simple_repeat 2 33 0 2076 111 50 0 chr17 44055050 44055329 -45449224 - AluSx SINE Alu -19 293 1 2321 88 3 7 chr17 44055824 44056121 -45448432 + AluSx SINE Alu 1 296 -16 2081 120 3 20 chr17 44056556 44056857 -45447696 - AluSx SINE Alu -18 294 1 1367 157 134 76 chr17 44057318 44057372 -45447181 - MSTD LTR MaLR -2 394 345 1755 172 3 3 chr17 44057372 44057669 -45446884 - AluJb SINE Alu -15 297 1 1367 157 134 76 chr17 44057669 44057957 -45446596 - MSTD LTR MaLR -51 345 32 2249 107 0 3 chr17 44058098 44058406 -45446147 - AluSx SINE Alu -5 307 1 2271 94 3 3 chr17 44058905 44059214 -45445339 - AluSc SINE Alu 0 309 1 1369 222 100 14 chr17 44059810 44060171 -45444382 + L1ME3 LINE L1 5635 6026 -136 339 212 0 0 chr17 44060180 44060246 -45444307 + L1ME3 LINE L1 6067 6132 -30 306 153 0 0 chr17 44060275 44060334 -45444219 - Alu SINE Alu -1 300 242 1825 150 0 20 chr17 44060334 44060634 -45443919 + AluJb SINE Alu 6 299 -13 2139 115 3 0 chr17 44061017 44061322 -45443231 + AluSx SINE Alu 1 306 -6 920 229 44 10 chr17 44061691 44061896 -45442657 - MER58A DNA MER1_type -1 223 12 2038 95 25 0 chr17 44062306 44062629 -45441924 - AluY SINE Alu 0 311 1 1987 140 3 0 chr17 44062629 44062935 -45441618 - AluSx SINE Alu -5 307 1 481 222 19 9 chr17 44063000 44063108 -45441445 + MER58 DNA MER1_type 1 109 -2311 541 234 47 0 chr17 44063109 44063237 -45441316 - AluSg/x SINE Alu -14 295 162 204 200 0 0 chr17 44063342 44063382 -45441171 + C-rich Low_complexity Low_complexity 1 40 0 245 191 36 12 chr17 44063585 44063669 -45440884 + A-rich Low_complexity Low_complexity 4 89 0 2026 62 92 4 chr17 44063839 44064111 -45440442 + AluSx SINE Alu 15 310 -2 243 273 250 23 chr17 44064165 44064293 -45440260 - MIR SINE MIR -92 170 14 212 228 0 63 chr17 44066786 44066865 -45437688 + (CCGGG)n Simple_repeat Simple_repeat 3 76 0 419 274 134 6 chr17 44067505 44067669 -45436884 + MIR SINE MIR 32 216 -46 200 291 36 35 chr17 44067710 44067830 -45436723 - MIR SINE MIR -61 147 74 2185 108 0 9 chr17 44068074 44068389 -45436164 + AluSx SINE Alu 1 312 0 2197 102 0 0 chr17 44068454 44068749 -45435804 + AluSx SINE Alu 1 295 -17 212 333 17 42 chr17 44068852 44068972 -45435581 - L2 LINE L2 0 3313 3197 242 340 73 40 chr17 44069765 44069915 -45434638 - MIR SINE MIR -3 259 105 234 250 0 17 chr17 44070817 44070877 -45433676 + MIR SINE MIR 32 90 -172 987 176 151 29 chr17 44070886 44071158 -45433395 - AluSx SINE Alu -2 310 6 1096 117 0 6 chr17 44071158 44071321 -45433232 - AluSg/x SINE Alu -17 295 134 2386 71 0 0 chr17 44071321 44071618 -45432935 - AluSq SINE Alu -16 297 1 1962 136 7 0 chr17 44071890 44072200 -45432353 - AluJo SINE Alu 0 312 1 923 169 97 0 chr17 44072651 44072805 -45431748 - FAM SINE Alu -6 169 1 2202 102 0 3 chr17 44072811 44073115 -45431438 - AluSq SINE Alu -10 303 1 1440 164 30 97 chr17 44073214 44073402 -45431151 - AluJb SINE Alu -5 307 149 2193 101 0 3 chr17 44073402 44073731 -45430822 - AluSq SINE Alu 0 313 1 1440 164 30 97 chr17 44073731 44073871 -45430682 - AluJb SINE Alu -163 149 1 306 51 0 0 chr17 44074045 44074084 -45430469 - LTR56 LTR ERV1 -58 387 349 2103 114 20 3 chr17 44074279 44074585 -45429968 + AluSx SINE Alu 1 311 -1 936 128 7 0 chr17 44074590 44074731 -45429822 + AluSg/x SINE Alu 125 266 -44 249 242 76 0 chr17 44075417 44075483 -45429070 + MIR SINE MIR 158 228 -34 263 258 156 48 chr17 44075678 44075845 -45428708 + L2 LINE L2 1330 1514 -1800 1505 155 93 138 chr17 44075852 44076415 -45428138 + LTR49 LTR ERV1 1 646 -61 2147 88 40 3 chr17 44076415 44076712 -45427841 + AluSg SINE Alu 1 308 -2 1505 155 93 138 chr17 44076712 44076772 -45427781 + LTR49 LTR ERV1 646 707 0 381 276 41 8 chr17 44076774 44076897 -45427656 + L2 LINE L2 1570 1696 -1618 1807 105 54 48 chr17 44077087 44077261 -45427292 - AluSx SINE Alu -15 297 119 2272 85 0 25 chr17 44077261 44077577 -45426976 - AluY SINE Alu -3 308 1 1807 105 54 48 chr17 44077577 44077697 -45426856 - AluSx SINE Alu -193 119 1 1434 244 158 55 chr17 44077712 44078181 -45426372 + L2 LINE L2 2120 2539 -774 1990 115 10 26 chr17 44078181 44078493 -45426060 - AluSx SINE Alu -5 307 1 1434 244 158 55 chr17 44078493 44079106 -45425447 + L2 LINE L2 2539 3309 -4 301 285 277 22 chr17 44079164 44079506 -45425047 + L2 LINE L2 2623 3048 -265 270 95 0 0 chr17 44080325 44080367 -45424186 + (CCG)n Simple_repeat Simple_repeat 2 43 0 578 498 18 18 chr17 44080860 44081083 -45423470 - AluSg/x SINE Alu 0 309 87 376 138 0 15 chr17 44081090 44081155 -45423398 - AluJb SINE Alu -56 246 183 1096 180 19 14 chr17 44081199 44081272 -45423281 - AluSx SINE Alu -100 212 141 2257 86 3 3 chr17 44081272 44081573 -45422980 - AluSx SINE Alu -11 301 1 1096 180 19 14 chr17 44081573 44081710 -45422843 - AluSx SINE Alu -171 141 1 189 0 0 0 chr17 44081710 44081731 -45422822 + (T)n Simple_repeat Simple_repeat 1 21 0 995 182 56 5 chr17 44081790 44081988 -45422565 + AluJb SINE Alu 90 297 -15 754 186 0 0 chr17 44081988 44082106 -45422447 - AluJo/FLAM SINE Alu -193 119 2 1437 197 33 7 chr17 44082118 44082422 -45422131 - AluJo SINE Alu 0 312 1 1867 118 79 13 chr17 44082437 44082742 -45421811 - MER1B DNA MER1_type 0 339 15 611 214 77 73 chr17 44082934 44083005 -45421548 + L2 LINE L2 2831 2900 -372 1560 149 68 37 chr17 44083005 44083301 -45421252 - AluJo SINE Alu -7 305 1 611 214 77 73 chr17 44083301 44083477 -45421076 + L2 LINE L2 2900 3079 -193 607 191 129 45 chr17 44083562 44083603 -45420950 - MER3 DNA MER1_type -16 193 157 2300 100 3 3 chr17 44083603 44083913 -45420640 + AluSx SINE Alu 1 310 -2 607 191 129 45 chr17 44083913 44083967 -45420586 - MER3 DNA MER1_type -52 157 109 2130 77 35 7 chr17 44083967 44084253 -45420300 + AluSc SINE Alu 1 294 -15 607 191 129 45 chr17 44084253 44084334 -45420219 - MER3 DNA MER1_type -100 109 1 1226 187 76 4 chr17 44085410 44085707 -45418846 + AluSx SINE Alu 1 316 0 325 339 56 78 chr17 44086930 44087287 -45417266 - L2 LINE L2 -4 3268 2920 207 335 145 11 chr17 44087288 44087467 -45417086 - MIR SINE MIR 0 262 60 2234 77 13 0 chr17 44087893 44088193 -45416360 - AluY SINE Alu -7 304 1 1750 129 11 31 chr17 44088201 44088361 -45416192 - AluSx SINE Alu -18 294 132 2152 118 0 3 chr17 44088361 44088666 -45415887 - AluSx SINE Alu -8 304 1 2163 112 0 10 chr17 44088669 44088983 -45415570 - AluSx SINE Alu -1 311 1 1750 129 11 31 chr17 44088983 44089105 -45415448 - AluSx SINE Alu -182 130 14 2164 89 0 7 chr17 44090064 44090367 -45414186 + AluSg SINE Alu 1 301 -9 2066 84 3 55 chr17 44090375 44090685 -45413868 + AluSc SINE Alu 1 294 -15 1486 154 117 8 chr17 44090699 44090965 -45413588 + AluSg1 SINE Alu 1 295 -14 1702 147 27 3 chr17 44090967 44091259 -45413294 + AluSx SINE Alu 1 299 -13 2288 78 0 0 chr17 44091645 44091939 -45412614 - AluY SINE Alu -17 294 1 524 220 0 0 chr17 44095280 44095389 -45409164 + FLAM_C SINE Alu 34 142 -1 2157 102 7 0 chr17 44095456 44095750 -45408803 + AluSg SINE Alu 1 296 -14 1660 150 7 39 chr17 44095760 44096066 -45408487 + AluJb SINE Alu 1 296 -16 1111 194 43 20 chr17 44096155 44096408 -45408145 - AluJo SINE Alu -12 300 42 800 124 0 0 chr17 44096511 44096632 -45407921 - AluSc SINE Alu -13 296 176 2053 132 3 0 chr17 44096656 44096952 -45407601 - AluSq SINE Alu -16 297 1 1836 144 3 3 chr17 44096955 44097263 -45407290 - AluJb SINE Alu 0 308 1 512 286 58 13 chr17 44099623 44099809 -45404744 - MIR SINE MIR -11 197 2 495 266 22 67 chr17 44099919 44100089 -45404464 - MIR3 SINE MIR -9 199 36 2012 129 0 3 chr17 44100089 44100383 -45404170 - AluSx SINE Alu -19 293 1 495 266 22 67 chr17 44100383 44100411 -45404142 - MIR3 SINE MIR -172 36 8 411 301 118 30 chr17 44102411 44102614 -45401939 + MIR SINE MIR 15 235 -27 453 216 137 0 chr17 44103208 44103347 -45401206 + MIR SINE MIR 47 204 -58 699 304 38 15 chr17 44103365 44103631 -45400922 + L2 LINE L2 2212 2483 -831 556 123 25 0 chr17 44103804 44103885 -45400668 - AluSg/x SINE Alu -26 286 204 * 557 87 0 0 chr17 44103883 44103952 -45400601 + Alu SINE Alu 222 290 -19 1624 192 4 0 chr17 44103960 44104271 -45400282 + AluJb SINE Alu 1 312 0 1608 151 34 4 chr17 44104302 44104567 -45399986 - AluJb SINE Alu -5 307 35 363 310 173 15 chr17 44105900 44106097 -45398456 - MIR SINE MIR -15 247 20 2008 116 27 0 chr17 44106209 44106502 -45398051 + AluSx SINE Alu 1 301 -11 2358 100 0 0 chr17 44109060 44109370 -45395183 + AluSx SINE Alu 1 310 -2 180 300 122 0 chr17 44109707 44109797 -45394756 + MIR SINE MIR 53 153 -109 438 265 191 0 chr17 44111450 44111505 -45393048 - MER91A DNA MER1_type 0 196 153 2307 34 45 7 chr17 44111505 44111797 -45392756 - AluY SINE Alu -8 303 1 438 265 191 0 chr17 44111797 44111903 -45392650 - MER91A DNA MER1_type -43 153 4 1318 142 5 5 chr17 44112554 44112758 -45391795 + AluJo SINE Alu 1 204 -108 329 145 0 0 chr17 44112858 44112920 -45391633 + Alu SINE Alu 241 302 0 1575 170 26 4 chr17 44112928 44113198 -45391355 - AluJo SINE Alu -36 276 1 264 196 0 0 chr17 44113228 44113279 -45391274 + MIR SINE MIR 84 134 -74 360 291 109 23 chr17 44113833 44114008 -45390545 - MIR SINE MIR -20 242 53 1648 80 0 0 chr17 44114098 44114310 -45390243 + AluY SINE Alu 82 293 -18 456 335 25 15 chr17 44114332 44114532 -45390021 + AluJb SINE Alu 8 209 -103 335 281 138 51 chr17 44114867 44115120 -45389433 + L2 LINE L2 2903 3177 -95 2072 137 0 9 chr17 44115721 44116036 -45388517 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 44116304 44116332 -45388221 + AT_rich Low_complexity Low_complexity 1 28 0 184 354 8 39 chr17 44116527 44116657 -45387896 + L3b LINE CR1 1106 1231 -352 1511 92 0 10 chr17 44116751 44116957 -45387596 + AluSq SINE Alu 1 204 -109 201 184 20 0 chr17 44116971 44117020 -45387533 + A-rich Low_complexity Low_complexity 1 50 0 1484 186 13 46 chr17 44117022 44117328 -45387225 - AluJb SINE Alu -16 296 1 192 276 32 89 chr17 44117603 44117726 -45386827 - MIR SINE MIR 0 262 147 548 326 19 56 chr17 44117729 44117996 -45386557 - MIR SINE MIR -4 258 2 243 182 0 0 chr17 44118708 44118752 -45385801 + Alu SINE Alu 1 44 -258 871 167 39 19 chr17 44118818 44118974 -45385579 + FAM SINE Alu 1 44 -5 2207 128 0 0 chr17 44118990 44119302 -45385251 + AluSx SINE Alu 1 312 0 2067 131 3 0 chr17 44119305 44119603 -45384950 + AluSx SINE Alu 1 299 -13 2175 95 0 0 chr17 44119994 44120311 -45384242 + AluSx SINE Alu 1 317 0 572 175 4 28 chr17 44120752 44120980 -45383573 + AluJo SINE Alu 1 297 -15 2037 147 3 0 chr17 44120985 44121297 -45383256 + AluSp SINE Alu 1 313 0 1577 146 11 21 chr17 44121385 44121666 -45382887 + AluJo SINE Alu 1 278 -34 2242 92 0 13 chr17 44122477 44122782 -45381771 + AluSq SINE Alu 1 301 -12 2066 122 3 14 chr17 44123329 44123624 -45380929 + AluSx SINE Alu 1 292 -20 193 339 36 54 chr17 44124121 44124233 -45380320 + L3 LINE CR1 391 500 -1077 2358 82 0 7 chr17 44124303 44124606 -45379947 + AluSp SINE Alu 1 301 -12 692 275 120 11 chr17 44124917 44125201 -45379352 - MLT1I LTR MaLR -23 386 72 240 303 118 20 chr17 44126031 44126183 -45378370 + MIR SINE MIR 29 195 -67 301 259 86 12 chr17 44126620 44126701 -45377852 - L2 LINE L2 -8 3264 3178 358 234 37 9 chr17 44126965 44127072 -45377481 - L1ME4a LINE L1 -1 6120 6011 219 146 0 0 chr17 44127328 44127369 -45377184 + (T)n Simple_repeat Simple_repeat 1 41 0 903 129 35 6 chr17 44127504 44127674 -45376879 - AluSc SINE Alu -13 296 122 324 0 0 0 chr17 44128337 44128373 -45376180 + (TG)n Simple_repeat Simple_repeat 2 37 0 262 307 274 19 chr17 44128709 44128924 -45375629 - L3b LINE CR1 -16 1567 1298 2346 88 0 3 chr17 44129242 44129550 -45375003 + AluSp SINE Alu 1 307 -6 198 0 0 0 chr17 44129616 44129638 -45374915 + (CA)n Simple_repeat Simple_repeat 1 22 0 327 104 0 0 chr17 44129714 44129762 -45374791 + (CA)n Simple_repeat Simple_repeat 2 49 0 1738 150 20 29 chr17 44130034 44130340 -45374213 - AluJb SINE Alu -9 303 1 2099 97 16 23 chr17 44130382 44130691 -45373862 - AluY SINE Alu -4 307 1 775 277 99 84 chr17 44130691 44131239 -45373314 + MER115 DNA AcHobo 41 605 -88 2315 104 0 0 chr17 44131239 44131546 -45373007 - AluSx SINE Alu -5 307 1 775 277 99 84 chr17 44131546 44131633 -45372920 + MER115 DNA AcHobo 605 689 -4 399 209 19 29 chr17 44132503 44132608 -45371945 - MIR SINE MIR -75 133 30 2415 80 3 0 chr17 44133782 44134094 -45370459 + AluSp SINE Alu 1 313 0 259 158 35 18 chr17 44134112 44134169 -45370384 - MER47A DNA MER2_type 0 366 309 912 221 67 0 chr17 44134170 44134365 -45370188 + AluJb SINE Alu 94 301 -11 1456 149 40 53 chr17 44134401 44134555 -45369998 - MER47A DNA MER2_type -2006 317 163 2267 89 0 3 chr17 44134555 44134857 -45369696 + AluSq SINE Alu 1 301 -12 1456 149 40 53 chr17 44134857 44135023 -45369530 - MER47A DNA MER2_type -2160 163 1 251 311 151 0 chr17 44135370 44135476 -45369077 + MIR SINE MIR 102 223 -39 2287 84 3 0 chr17 44135662 44136005 -45368548 - AluY SINE Alu 0 311 1 1936 104 87 3 chr17 44136005 44136292 -45368261 - AluSx SINE Alu 0 312 2 323 185 8 46 chr17 44136451 44136581 -45367972 + CT-rich Low_complexity Low_complexity 2 126 0 1690 129 13 55 chr17 44136612 44136779 -45367774 - AluSx SINE Alu -16 296 146 2286 105 3 0 chr17 44136779 44137083 -45367470 - AluSq SINE Alu -8 305 1 1690 129 13 55 chr17 44137083 44137224 -45367329 - AluSx SINE Alu -166 146 1 1859 114 40 0 chr17 44137305 44137578 -45366975 + AluSc SINE Alu 1 284 -25 307 293 99 42 chr17 44137660 44137805 -45366748 + MIR SINE MIR 54 214 -48 1831 138 7 3 chr17 44137805 44138087 -45366466 + AluJb SINE Alu 9 291 -21 307 293 99 42 chr17 44138087 44138132 -45366421 + MIR SINE MIR 214 255 -7 570 225 22 71 chr17 44138701 44138883 -45365670 + L2 LINE L2 3141 3313 0 2139 90 3 10 chr17 44138904 44139014 -45365539 + AluSx SINE Alu 26 135 -177 2065 114 3 10 chr17 44139014 44139340 -45365213 + AluSx SINE Alu 1 312 0 2139 90 3 10 chr17 44139340 44139518 -45365035 + AluSx SINE Alu 135 312 0 204 306 14 0 chr17 44139519 44139591 -45364962 + (CACG)n Simple_repeat Simple_repeat 3 75 0 1331 153 0 62 chr17 44140085 44140327 -45364226 - AluJo SINE Alu -85 227 1 580 164 10 0 chr17 44140342 44140446 -45364107 - Alu SINE Alu 0 311 207 1081 84 7 0 chr17 44140447 44140613 -45363940 + AluSq SINE Alu 142 308 0 2129 70 35 0 chr17 44141195 44141479 -45363074 + AluY SINE Alu 1 294 -17 1083 168 5 15 chr17 44141495 44141692 -45362861 + AluSx SINE Alu 5 199 -113 1543 112 4 33 chr17 44141808 44142050 -45362503 + AluSg/x SINE Alu 78 312 0 1061 110 39 0 chr17 44142050 44142204 -45362349 + AluSg/x SINE Alu 134 293 -19 442 312 106 35 chr17 44142502 44142701 -45361852 - MIR SINE MIR -34 228 16 22 35 0 0 chr17 44143794 44143823 -45360730 + GC_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr17 44144943 44144974 -45359579 + GC_rich Low_complexity Low_complexity 1 31 0 229 260 13 26 chr17 44146321 44146398 -45358155 - L2 LINE L2 -305 2967 2892 2418 76 0 0 chr17 44146478 44146782 -45357771 + AluSg SINE Alu 1 304 -6 311 331 111 25 chr17 44147492 44147521 -45357032 - MIR SINE MIR -4 258 233 2109 97 31 0 chr17 44147521 44147810 -45356743 - AluSq SINE Alu -15 298 1 311 331 111 25 chr17 44147810 44147982 -45356571 - MIR SINE MIR -29 233 38 188 360 40 0 chr17 44147982 44148057 -45356496 + L3 LINE CR1 1496 1573 -4 450 233 0 4 chr17 44148146 44148252 -45356301 + MIR SINE MIR 55 157 -62 2053 136 0 3 chr17 44148261 44148569 -45355984 + AluJb SINE Alu 1 307 -5 898 218 6 0 chr17 44148569 44148739 -45355814 + AluJb SINE Alu 134 304 -8 204 254 284 0 chr17 44148741 44148808 -45355745 + MIR SINE MIR 177 262 0 2351 83 0 3 chr17 44149152 44149464 -45355089 + AluY SINE Alu 1 311 0 283 329 105 20 chr17 44149488 44149639 -45354914 + MIR3 SINE MIR 3 166 -65 489 287 121 6 chr17 44149793 44149967 -45354586 - MER117 DNA MER1_type -3 194 1 192 317 25 33 chr17 44150303 44150423 -45354130 + L2 LINE L2 2945 3063 -209 2046 110 0 0 chr17 44150693 44151011 -45353542 - AluSg SINE Alu 0 318 1 406 303 30 23 chr17 44151189 44151321 -45353232 + MIR SINE MIR 60 192 -70 2103 118 7 0 chr17 44151325 44151621 -45352932 + AluSx SINE Alu 1 298 -14 316 93 0 0 chr17 44151641 44151695 -45352858 - Alu SINE Alu 0 300 247 2170 104 3 3 chr17 44152264 44152561 -45351992 + AluSx SINE Alu 1 297 -15 2020 75 51 7 chr17 44152563 44152858 -45351695 + AluSx SINE Alu 1 308 -4 1770 152 7 0 chr17 44152872 44153148 -45351405 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr17 44153148 44153169 -45351384 + (TC)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr17 44153169 44153190 -45351363 + AT_rich Low_complexity Low_complexity 1 21 0 813 132 8 0 chr17 44153190 44153311 -45351242 - FLAM_C SINE Alu -21 122 1 2098 127 0 0 chr17 44153479 44153779 -45350774 + AluSg SINE Alu 1 300 -10 296 191 0 32 chr17 44153779 44153842 -45350711 - L1MB8 LINE L1 -84 6094 6034 2153 102 3 7 chr17 44153852 44154147 -45350406 + AluSx SINE Alu 1 294 -18 1158 158 5 0 chr17 44154189 44154373 -45350180 + AluJo SINE Alu 3 187 -125 201 108 0 0 chr17 44154413 44154450 -45350103 + (G)n Simple_repeat Simple_repeat 1 37 0 21 36 0 0 chr17 44154763 44154791 -45349762 + AT_rich Low_complexity Low_complexity 1 28 0 236 213 0 0 chr17 44154795 44154842 -45349711 + MER57A LTR ERV1 291 337 -66 27 0 0 26 chr17 44154843 44154862 -45349691 + AT_rich Low_complexity Low_complexity 1 19 -18 2321 57 7 17 chr17 44154862 44155159 -45349394 + AluSq SINE Alu 2 295 -18 27 0 0 26 chr17 44155159 44155177 -45349376 + AT_rich Low_complexity Low_complexity 19 37 0 1410 166 133 19 chr17 44155177 44155448 -45349105 + AluJb SINE Alu 1 302 0 1325 189 23 23 chr17 44155484 44155749 -45348804 - AluJo SINE Alu -9 303 39 230 56 28 0 chr17 44155849 44155885 -45348668 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 1238 176 118 39 chr17 44155885 44156140 -45348413 - AluJo SINE Alu -36 276 2 180 77 0 0 chr17 44156143 44156169 -45348384 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1615 174 0 24 chr17 44156173 44156461 -45348092 - AluJo SINE Alu -31 281 1 1934 144 0 7 chr17 44157138 44157437 -45347116 - AluJo SINE Alu -15 297 1 2107 112 0 10 chr17 44158390 44158694 -45345859 + AluSx SINE Alu 1 301 -11 967 155 19 0 chr17 44158697 44158858 -45345695 + AluSg/x SINE Alu 142 305 -7 733 202 8 0 chr17 44158903 44159032 -45345521 + FLAM_A SINE Alu 4 133 0 477 77 192 0 chr17 44159040 44159118 -45345435 + L1MA2 LINE L1 6208 6300 -4 278 290 80 30 chr17 44159529 44159629 -45344924 - MIR3 SINE MIR -47 161 57 307 267 22 0 chr17 44162438 44162528 -45342025 - MIR SINE MIR -86 176 85 2061 102 0 3 chr17 44162564 44162871 -45341682 - AluSx SINE Alu 0 306 1 2117 91 3 13 chr17 44163451 44163749 -45340804 + AluSx SINE Alu 1 295 -17 302 313 76 9 chr17 44163810 44164034 -45340519 + L2 LINE L2 2818 3056 -257 1696 136 6 87 chr17 44164233 44164556 -45339997 + AluJo SINE Alu 14 310 -2 2215 78 0 10 chr17 44164558 44164852 -45339701 + AluY SINE Alu 21 311 0 209 231 67 106 chr17 44164869 44164897 -45339656 + L2 LINE L2 2700 2728 -586 1484 204 3 19 chr17 44164897 44165206 -45339347 + AluJo SINE Alu 1 304 -8 209 231 67 106 chr17 44165206 44165281 -45339272 + L2 LINE L2 2728 2799 -515 434 276 162 55 chr17 44165339 44165405 -45339148 + L2 LINE L2 2966 3024 -289 1929 116 43 20 chr17 44165405 44165707 -45338846 - AluJb SINE Alu -3 309 1 434 276 162 55 chr17 44165707 44165948 -45338605 + L2 LINE L2 3024 3306 -7 1998 140 0 0 chr17 44166680 44166972 -45337581 - AluSx SINE Alu -19 293 2 1351 167 163 8 chr17 44167291 44167548 -45337005 - AluJb SINE Alu -5 297 1 2400 73 0 6 chr17 44167932 44168245 -45336308 + AluY SINE Alu 1 311 0 1894 134 11 0 chr17 44168297 44168574 -45335979 + AluSq SINE Alu 1 280 -33 219 172 111 0 chr17 44168582 44168681 -45335872 + GA-rich Low_complexity Low_complexity 3 112 0 795 80 21 64 chr17 44168682 44168869 -45335684 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 2120 107 3 3 chr17 44172941 44173239 -45331314 + AluSx SINE Alu 1 298 -14 1301 206 10 14 chr17 44175997 44176289 -45328264 + AluJb SINE Alu 5 295 -17 2147 107 10 0 chr17 44176292 44176591 -45327962 + AluSx SINE Alu 1 302 -10 290 229 16 0 chr17 44177213 44177274 -45327279 + L2 LINE L2 3252 3313 0 406 311 26 7 chr17 44177367 44177518 -45327035 - L3 LINE CR1 -1 1576 1423 212 341 37 0 chr17 44177556 44177638 -45326915 - L3 LINE CR1 -244 1333 1249 487 285 140 20 chr17 44177772 44177972 -45326581 - MIR SINE MIR -14 248 25 2423 93 0 0 chr17 44229451 44229763 -45274790 + AluSx SINE Alu 1 312 0 577 246 0 14 chr17 44231736 44231874 -45272679 + MIR3 SINE MIR 3 138 -70 270 236 19 19 chr17 44232432 44232538 -45272015 - Charlie8 DNA MER1_type -2271 146 41 711 126 0 42 chr17 44232598 44232717 -45271836 + FLAM_C SINE Alu 28 141 -2 2072 125 10 0 chr17 44232721 44233017 -45271536 + AluSx SINE Alu 1 299 -13 237 258 52 52 chr17 44233110 44233207 -45271346 + L2 LINE L2 3176 3272 0 379 320 93 0 chr17 44234310 44234460 -45270093 - MIR3 SINE MIR -15 193 30 1757 128 50 30 chr17 44234515 44234813 -45269740 + AluJb SINE Alu 1 304 -8 2363 91 3 0 chr17 44234814 44235123 -45269430 + AluSp SINE Alu 1 310 -3 2495 53 0 0 chr17 44235398 44235697 -45268856 - AluY SINE Alu -12 299 1 1164 37 0 0 chr17 44235697 44235831 -45268722 - AluY SINE Alu -177 134 1 356 365 98 0 chr17 44235888 44236102 -45268451 - MIR SINE MIR -5 257 23 344 352 94 27 chr17 44236121 44236786 -45267767 + L2 LINE L2 2555 3272 0 1887 152 0 23 chr17 44236791 44237101 -45267452 + AluJo SINE Alu 1 303 -9 582 168 0 0 chr17 44237123 44237218 -45267335 + FLAM_C SINE Alu 40 134 -9 2057 103 7 36 chr17 44237334 44237510 -45267043 - AluSx SINE Alu -1 311 146 2419 67 0 3 chr17 44237510 44237809 -45266744 - AluY SINE Alu -13 298 1 2057 103 7 36 chr17 44237809 44237933 -45266620 - AluSx SINE Alu -166 146 20 533 318 244 23 chr17 44238093 44238137 -45266416 + L2 LINE L2 1911 1944 -1370 2321 78 0 3 chr17 44238137 44238430 -45266123 - AluSg SINE Alu -18 292 1 533 318 244 23 chr17 44238430 44238733 -45265820 + L2 LINE L2 1944 2179 -1135 1882 138 6 32 chr17 44238733 44239045 -45265508 + AluJo SINE Alu 1 304 -8 533 318 244 23 chr17 44239045 44239347 -45265206 + L2 LINE L2 2179 2705 -609 556 78 0 0 chr17 44239359 44239436 -45265117 + Alu SINE Alu 221 297 -12 289 336 45 54 chr17 44239521 44239964 -45264589 + L2 LINE L2 2832 3270 -2 979 117 102 51 chr17 44240259 44240456 -45264097 - MER3 DNA MER1_type -2 207 1 21 95 0 0 chr17 44240953 44241016 -45263537 + GC_rich Low_complexity Low_complexity 1 63 0 25 114 0 0 chr17 44241160 44241283 -45263270 + GC_rich Low_complexity Low_complexity 1 123 0 312 241 111 9 chr17 44241906 44242014 -45262539 + MIR SINE MIR 34 152 -110 218 273 64 55 chr17 44244869 44244979 -45259574 - MIR SINE MIR -69 139 29 2230 116 0 0 chr17 44245054 44245357 -45259196 - AluSx SINE Alu -9 303 1 1599 156 3 60 chr17 44246955 44247067 -45257486 + AluJo SINE Alu 1 118 -187 2269 137 39 20 chr17 44247067 44247424 -45257129 + THE1B LTR MaLR 1 364 0 1599 156 3 60 chr17 44247424 44247633 -45256920 + AluJo SINE Alu 118 305 0 367 283 121 22 chr17 44247633 44247814 -45256739 + MIR SINE MIR 37 231 -31 456 19 0 0 chr17 44247969 44248022 -45256531 + (TG)n Simple_repeat Simple_repeat 1 53 0 2206 109 7 0 chr17 44248144 44248447 -45256106 + AluSx SINE Alu 1 305 -7 2139 113 13 3 chr17 44249137 44249438 -45255115 - AluSx SINE Alu -8 304 1 219 281 9 95 chr17 44249631 44249841 -45254712 + L2 LINE L2 3035 3226 -46 2084 115 0 7 chr17 44250090 44250407 -45254146 - AluSx SINE Alu 0 312 1 1857 140 7 3 chr17 44251195 44251487 -45253066 - AluSx SINE Alu -6 306 14 228 174 0 0 chr17 44251644 44251690 -45252863 + L2 LINE L2 3268 3313 0 2347 115 0 0 chr17 44251693 44252005 -45252548 - AluSx SINE Alu 0 312 1 193 209 23 70 chr17 44252150 44252236 -45252317 + L2 LINE L2 2931 3012 -260 2144 108 3 7 chr17 44253739 44254044 -45250509 + AluSq SINE Alu 9 312 -1 561 30 0 0 chr17 44254547 44254614 -45249939 + (CA)n Simple_repeat Simple_repeat 1 67 0 1804 130 77 63 chr17 44254905 44255058 -45249495 + MLT1B LTR MaLR 1 150 -240 2009 120 0 17 chr17 44255058 44255357 -45249196 - AluSx SINE Alu -16 296 3 1950 129 0 14 chr17 44255360 44255640 -45248913 - AluSx SINE Alu -30 282 7 1804 130 77 63 chr17 44255640 44255860 -45248693 + MLT1B LTR MaLR 151 383 -7 790 181 8 0 chr17 44256189 44256322 -45248231 - AluJo SINE Alu -178 134 1 518 217 101 79 chr17 44256322 44256511 -45248042 + MIR SINE MIR 20 212 -50 2156 97 0 7 chr17 44256535 44256552 -45248001 - AluSc SINE Alu 0 309 293 181 0 0 0 chr17 44256552 44256572 -45247981 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2156 97 0 7 chr17 44256572 44256853 -45247700 - AluSc SINE Alu -16 293 1 1473 189 108 65 chr17 44257096 44257281 -45247272 + MLT1C LTR MaLR 1 177 -290 2183 118 0 7 chr17 44257281 44257587 -45246966 + AluSg SINE Alu 1 304 -6 1473 189 108 65 chr17 44257587 44257845 -45246708 + MLT1C LTR MaLR 177 463 -4 270 388 25 12 chr17 44258777 44258937 -45245616 - MIR3 SINE MIR -38 170 9 342 298 60 48 chr17 44258950 44259006 -45245547 - MIR SINE MIR 0 262 208 595 201 0 79 chr17 44259006 44259145 -45245408 - FLAM_A SINE Alu -2 131 4 342 298 60 48 chr17 44259145 44259256 -45245297 - MIR SINE MIR -54 208 93 180 0 0 0 chr17 44259537 44259557 -45244996 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 218 269 31 92 chr17 44260167 44260255 -45244298 + MIR3 SINE MIR 60 152 -56 2135 116 13 0 chr17 44260255 44260556 -45243997 + AluSq SINE Alu 1 305 -8 2448 49 3 3 chr17 44260557 44260862 -45243691 + AluY SINE Alu 1 305 -6 218 269 31 92 chr17 44260862 44260901 -45243652 + MIR3 SINE MIR 151 181 -27 184 313 45 15 chr17 44262022 44262089 -45242464 - L3b LINE CR1 -225 1358 1290 22 0 0 0 chr17 44263210 44263232 -45241321 + GC_rich Low_complexity Low_complexity 1 22 0 251 264 39 140 chr17 44263569 44263654 -45240899 - MIR SINE MIR -72 190 131 2104 105 11 0 chr17 44263654 44263940 -45240613 + AluSq SINE Alu 6 294 -19 251 264 39 140 chr17 44263940 44264032 -45240521 - MIR SINE MIR -131 131 31 519 301 121 20 chr17 44264439 44264785 -45239768 + L2 LINE L2 2890 3270 -2 401 96 14 41 chr17 44264816 44264889 -45239664 + L1MB8 LINE L1 6107 6177 -1 2277 78 3 3 chr17 44264889 44265183 -45239370 - AluSc SINE Alu -15 294 1 839 302 167 3 chr17 44265330 44265684 -45238869 - L3 LINE CR1 -3 1574 1163 2443 63 0 0 chr17 44265987 44266287 -45238266 - AluY SINE Alu -10 301 2 222 302 107 13 chr17 44266350 44266499 -45238054 - L3 LINE CR1 -550 1027 865 609 263 58 54 chr17 44266704 44266834 -45237719 - MIR SINE MIR -7 255 122 2457 65 0 3 chr17 44266834 44267143 -45237410 + AluY SINE Alu 1 308 -3 609 263 58 54 chr17 44267143 44267236 -45237317 - MIR SINE MIR -140 122 31 283 271 21 52 chr17 44267552 44267648 -45236905 + L2 LINE L2 3220 3312 -1 436 291 73 24 chr17 44267695 44267860 -45236693 + MIR SINE MIR 77 249 -13 280 276 19 67 chr17 44267853 44267958 -45236595 - MIR SINE MIR -94 168 69 * 274 279 56 114 chr17 44269340 44269546 -45235007 + MIR3 SINE MIR 7 198 -62 1524 137 73 67 chr17 44269555 44269697 -45234856 + AluJb SINE Alu 1 141 -171 294 95 0 0 chr17 44269697 44269739 -45234814 + (TA)n Simple_repeat Simple_repeat 2 43 0 1524 137 73 67 chr17 44269739 44269896 -45234657 + AluJb SINE Alu 141 302 -10 1461 164 85 51 chr17 44269900 44270193 -45234360 + AluJo SINE Alu 1 303 -9 472 240 147 7 chr17 44271395 44271545 -45233008 + MIR SINE MIR 79 249 -13 423 208 36 119 chr17 44271543 44271711 -45232842 - L2 LINE L2 -4 3309 3156 * 483 273 58 70 chr17 44271808 44271886 -45232667 - MER5B DNA MER1_type -4 174 97 1864 120 46 7 chr17 44271886 44272169 -45232384 - AluSx SINE Alu -18 294 1 483 273 58 70 chr17 44272169 44272262 -45232291 - MER5B DNA MER1_type -81 97 5 332 233 118 19 chr17 44272277 44272403 -45232150 - MER5A DNA MER1_type -6 172 46 570 78 13 0 chr17 44272754 44272831 -45231722 - AluS SINE Alu -234 78 1 947 153 0 0 chr17 44273150 44273287 -45231266 + AluJo SINE Alu 7 143 -169 2146 115 3 0 chr17 44273289 44273593 -45230960 + AluSx SINE Alu 1 305 -7 530 170 62 0 chr17 44273603 44273694 -45230859 + LTR64 LTR ERVK 1 102 -456 2192 92 0 16 chr17 44273694 44274000 -45230553 - AluY SINE Alu -10 301 1 530 170 62 0 chr17 44274000 44274020 -45230533 + LTR64 LTR ERVK 102 119 -439 683 156 67 17 chr17 44274022 44274201 -45230352 + MER4-int LTR ERV1 3831 4018 -2580 2256 119 0 0 chr17 44274201 44274513 -45230040 - AluSx SINE Alu 0 312 1 1361 171 77 18 chr17 44274564 44274850 -45229703 + AluJo SINE Alu 9 311 -1 365 193 51 37 chr17 44274852 44274984 -45229569 + MER4-int LTR ERV1 4067 4748 -1850 1830 149 10 29 chr17 44275103 44275411 -45229142 - AluJo SINE Alu -10 302 1 1554 127 0 0 chr17 44275509 44275721 -45228832 + AluSx SINE Alu 1 212 -100 1108 167 0 102 chr17 44275721 44275767 -45228786 + AluJb SINE Alu 78 127 -185 1800 137 19 54 chr17 44275767 44276080 -45228473 - AluSx SINE Alu -10 302 1 1108 167 0 102 chr17 44276080 44276091 -45228462 + AluJb SINE Alu 127 138 -174 2223 97 0 3 chr17 44276091 44276391 -45228162 - AluSg SINE Alu -11 299 1 1108 167 0 102 chr17 44276391 44276577 -45227976 + AluJb SINE Alu 138 297 -15 22 0 0 0 chr17 44276580 44276602 -45227951 + AT_rich Low_complexity Low_complexity 1 22 0 1804 129 37 0 chr17 44276604 44276896 -45227657 + AluSx SINE Alu 1 302 0 2291 96 0 0 chr17 44276914 44277215 -45227338 + AluSx SINE Alu 1 301 -11 2122 72 29 7 chr17 44277323 44277602 -45226951 - AluSp SINE Alu -13 300 16 996 146 15 39 chr17 44277932 44278137 -45226416 + LTR64 LTR ERVK 1 200 -358 729 179 0 15 chr17 44278137 44278271 -45226282 + FLAM_C SINE Alu 1 132 -11 774 173 61 2 chr17 44278271 44278546 -45226007 + LTR64 LTR ERVK 191 545 -13 294 281 67 0 chr17 44278556 44278645 -45225908 + MIR SINE MIR 163 257 -5 280 192 68 14 chr17 44278695 44278768 -45225785 - MIR SINE MIR -93 169 93 794 152 0 15 chr17 44279354 44279486 -45225067 - AluJb SINE Alu -46 266 137 285 224 28 75 chr17 44279505 44279612 -45224941 + L2 LINE L2 2604 2705 -609 1313 128 51 0 chr17 44279622 44279844 -45224709 + AluJb SINE Alu 85 312 0 431 329 143 18 chr17 44280517 44280772 -45223781 + L2 LINE L2 2825 3047 -225 2368 78 10 3 chr17 44280772 44281079 -45223474 - AluSx SINE Alu -3 309 1 431 329 143 18 chr17 44281079 44281107 -45223446 + L2 LINE L2 3047 3070 -202 2268 53 43 0 chr17 44281107 44281389 -45223164 + AluYa5 SINE Alu 1 294 -17 431 329 143 18 chr17 44281389 44281502 -45223051 + L2 LINE L2 3070 3272 0 1544 154 27 57 chr17 44281669 44281967 -45222586 + AluJo SINE Alu 21 309 -3 301 281 117 23 chr17 44282473 44282601 -45221952 + MIR3 SINE MIR 5 144 -64 1911 130 3 17 chr17 44282612 44282913 -45221640 + AluSx SINE Alu 1 297 -15 1999 139 0 13 chr17 44284063 44284379 -45220174 - AluSx SINE Alu 0 312 1 2188 111 3 0 chr17 44284479 44284777 -45219776 - AluSq SINE Alu -14 299 1 276 331 11 17 chr17 44284938 44285116 -45219437 + GA-rich Low_complexity Low_complexity 3 179 0 2545 242 60 19 chr17 44286337 44287003 -45217550 - MER115 DNA AcHobo 0 693 1 917 267 52 0 chr17 44287563 44287795 -45216758 - MIR SINE MIR -7 255 12 190 284 49 25 chr17 44288136 44288217 -45216336 + L2 LINE L2 3007 3089 -183 185 125 0 21 chr17 44288974 44289022 -45215531 + (CGGGG)n Simple_repeat Simple_repeat 1 47 0 1950 145 0 3 chr17 44290403 44290707 -45213846 - AluSx SINE Alu -9 303 1 1471 191 56 30 chr17 44290724 44291028 -45213525 + AluJb SINE Alu 1 312 0 2054 104 7 10 chr17 44291032 44291321 -45213232 + AluSx SINE Alu 1 288 -24 232 280 106 15 chr17 44291445 44291516 -45213037 + L1MA10 LINE L1 6180 6243 -91 2171 107 0 16 chr17 44291516 44291824 -45212729 + AluSq SINE Alu 1 303 -10 232 280 106 15 chr17 44291824 44291884 -45212669 + L1MA10 LINE L1 6243 6323 -11 300 330 57 65 chr17 44292998 44293277 -45211276 + L2 LINE L2 2578 2854 -460 1919 122 42 14 chr17 44293294 44293581 -45210972 - AluSx SINE Alu -17 295 1 574 303 0 7 chr17 44293855 44294010 -45210543 + MIR SINE MIR 47 200 -62 1941 96 66 0 chr17 44294445 44294716 -45209837 + AluSg SINE Alu 9 297 -13 1057 184 0 5 chr17 44296487 44296838 -45207715 + AluJo SINE Alu 119 468 0 2287 97 0 7 chr17 44297009 44297319 -45207234 + AluSx SINE Alu 1 308 -4 1729 145 13 33 chr17 44297573 44297876 -45206677 + AluJo SINE Alu 1 297 -15 205 179 0 90 chr17 44298388 44298455 -45206098 + C-rich Low_complexity Low_complexity 5 65 0 2685 156 124 49 chr17 44298822 44299393 -45205160 + LTR18B LTR ERVL 1 614 0 374 282 38 53 chr17 44299613 44299744 -45204809 - MIR SINE MIR -62 146 18 560 305 96 34 chr17 44299982 44300107 -45204446 - L2 LINE L2 -3 3269 3153 2266 82 17 0 chr17 44300107 44300399 -45204154 + AluSx SINE Alu 1 297 -15 2348 87 0 3 chr17 44300399 44300710 -45203843 + AluSg SINE Alu 1 310 0 560 305 96 34 chr17 44300710 44301088 -45203465 - L2 LINE L2 -118 3154 2726 262 239 17 0 chr17 44301555 44301622 -45202931 - MIR SINE MIR -65 143 82 203 236 0 18 chr17 44304431 44304486 -45200067 + G-rich Low_complexity Low_complexity 4 57 0 482 300 90 20 chr17 44306522 44306722 -45197831 - MIR SINE MIR -24 238 25 1914 130 16 32 chr17 44306929 44307245 -45197308 + AluJb SINE Alu 1 311 -1 318 267 163 29 chr17 44309385 44309557 -45194996 + MER117 DNA MER1_type 1 195 -2 301 204 7 48 chr17 44311633 44311780 -45192773 + (CTGGGG)n Simple_repeat Simple_repeat 6 146 0 475 106 0 106 chr17 44312357 44312461 -45192092 + FLAM_A SINE Alu 44 136 -6 1007 100 0 0 chr17 44312468 44312598 -45191955 + FLAM_C SINE Alu 1 130 -3 1895 77 19 15 chr17 44313959 44314219 -45190334 + AluSx SINE Alu 52 312 0 2619 39 0 3 chr17 44314220 44314530 -45190023 + AluY SINE Alu 2 310 -1 2231 96 17 0 chr17 44314529 44314830 -45189723 + AluSq SINE Alu 1 306 -7 * 468 216 0 10 chr17 44316539 44316641 -45187912 - MIR SINE MIR -133 129 29 2424 77 0 0 chr17 44316844 44317154 -45187399 + AluY SINE Alu 1 310 -1 280 286 0 12 chr17 44317616 44317700 -45186853 + L1ME3 LINE L1 5631 5713 -2095 1676 139 61 3 chr17 44318025 44318320 -45186233 - AluJb SINE Alu 0 312 1 1641 164 32 11 chr17 44318321 44318601 -45185952 - AluJo SINE Alu -14 298 13 207 314 29 20 chr17 44320535 44320637 -45183916 - MIR SINE MIR -85 123 21 216 0 0 0 chr17 44321457 44321481 -45183072 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 371 215 6 0 chr17 44321863 44322040 -45182513 + (CA)n Simple_repeat Simple_repeat 2 179 0 1030 139 115 103 chr17 44323037 44323289 -45181264 - AluJo SINE Alu -19 293 39 201 337 24 0 chr17 44323324 44323407 -45181146 - MIR SINE MIR -115 147 63 231 200 0 0 chr17 44323981 44324026 -45180527 - MER5B DNA MER1_type 0 178 134 204 257 129 0 chr17 44324176 44324246 -45180307 + MIR SINE MIR 67 145 -117 1045 138 6 6 chr17 44324919 44325079 -45179474 + AluSg/x SINE Alu 129 288 -22 1620 141 59 24 chr17 44325459 44325749 -45178804 - AluSg SINE Alu 0 310 11 784 149 33 0 chr17 44325754 44325875 -45178678 - AluJb SINE Alu -11 301 177 195 286 181 23 chr17 44325877 44326010 -45178543 - MER5A DNA MER1_type -9 180 27 333 236 182 18 chr17 44325890 44326000 -45178553 + MER5B DNA MER1_type 25 152 -26 396 283 72 45 chr17 44326934 44327174 -45177379 + MIR SINE MIR 5 260 -2 340 244 115 51 chr17 44327184 44327340 -45177213 - MIR3 SINE MIR -6 202 37 2211 105 0 0 chr17 44327518 44327822 -45176731 + AluSx SINE Alu 2 305 -7 315 250 58 8 chr17 44327833 44327953 -45176600 + L1ME3 LINE L1 6035 6160 -2 2352 82 0 0 chr17 44328100 44328405 -45176148 + AluSc SINE Alu 1 305 -4 3665 72 4 8 chr17 44329668 44330153 -45174400 + L1PA4 LINE L1 5670 6152 -3 226 239 83 65 chr17 44330162 44330392 -45174161 + L1ME LINE L1 5677 5910 -211 360 0 0 0 chr17 44330451 44330491 -45174062 + (TG)n Simple_repeat Simple_repeat 1 40 0 1873 159 3 0 chr17 44330536 44330826 -45173727 + AluJo SINE Alu 1 291 -21 1623 111 13 4 chr17 44331903 44332137 -45172416 - AluY SINE Alu -18 293 58 1946 152 0 0 chr17 44332984 44333286 -45171267 + AluSx SINE Alu 1 302 -10 543 198 87 68 chr17 44333286 44333430 -45171123 - L1MC3 LINE L1 -816 6969 6818 1892 143 7 0 chr17 44333430 44333716 -45170837 - AluSx SINE Alu -24 288 1 543 198 87 68 chr17 44333716 44333773 -45170780 - L1MC3 LINE L1 -967 6818 6764 212 204 23 0 chr17 44334376 44334420 -45170133 + (CA)n Simple_repeat Simple_repeat 2 46 0 233 263 13 26 chr17 44334457 44334533 -45170020 - MIR3 SINE MIR -20 188 114 22 80 0 0 chr17 44334657 44334707 -45169846 + GC_rich Low_complexity Low_complexity 1 50 0 675 220 148 5 chr17 44336396 44336605 -45167948 - MIR SINE MIR -22 240 2 415 280 70 19 chr17 44337189 44337346 -45167207 + MIR3 SINE MIR 21 185 -23 189 206 0 0 chr17 44338991 44339025 -45165528 + L2 LINE L2 3249 3282 -31 2326 90 0 6 chr17 44339174 44339486 -45165067 - AluSg SINE Alu 0 310 1 183 243 0 62 chr17 44339493 44339558 -45164995 + L2 LINE L2 2915 2977 -300 423 253 0 11 chr17 44339852 44339947 -45164606 + AluJb SINE Alu 135 228 -84 443 238 59 0 chr17 44340005 44340106 -45164447 - AluJb SINE Alu -68 244 138 437 243 22 54 chr17 44340134 44340319 -45164234 + AluSg SINE Alu 2 180 -130 248 317 10 19 chr17 44340443 44340547 -45164006 - AluSc SINE Alu -106 193 91 920 112 0 0 chr17 44341077 44341202 -45163351 + AluJb SINE Alu 1 125 -187 447 323 124 26 chr17 44341569 44341795 -45162758 - MIR SINE MIR -10 252 5 1971 153 0 0 chr17 44342287 44342588 -45161965 + AluJb SINE Alu 4 304 -8 2291 97 0 7 chr17 44342588 44342897 -45161656 + AluSx SINE Alu 1 308 -4 261 0 0 0 chr17 44343056 44343085 -45161468 + (A)n Simple_repeat Simple_repeat 1 29 0 1628 76 97 69 chr17 44343087 44343376 -45161177 + AluSq SINE Alu 1 297 -16 512 245 45 19 chr17 44343475 44343630 -45160923 - MIR SINE MIR -102 160 2 2348 67 0 3 chr17 44343666 44343964 -45160589 + AluY SINE Alu 1 297 -14 222 316 0 51 chr17 44344520 44344599 -45159954 + MIR SINE MIR 47 121 -141 2168 114 3 0 chr17 44345007 44345304 -45159249 + AluSx SINE Alu 1 298 -14 2300 96 0 3 chr17 44345643 44345955 -45158598 + AluSx SINE Alu 1 311 -1 2226 52 21 7 chr17 44347759 44348047 -45156506 - AluSx SINE Alu -15 297 6 3553 132 42 26 chr17 44348414 44349179 -45155374 - L1P1 LINE L1 -401 5754 5392 1921 108 65 0 chr17 44349179 44349457 -45155096 - AluSc SINE Alu -13 296 1 3553 132 42 26 chr17 44349457 44349785 -45154768 - L1P1 LINE L1 -763 5392 5071 797 167 0 8 chr17 44350053 44350185 -45154368 + FLAM_A SINE Alu 1 131 -2 24 0 0 0 chr17 44350185 44350209 -45154344 + AT_rich Low_complexity Low_complexity 1 24 0 312 100 17 0 chr17 44350306 44350366 -45154187 + Alu SINE Alu 242 302 0 387 261 35 9 chr17 44350399 44350514 -45154039 + FLAM_C SINE Alu 1 118 -15 7326 121 35 37 chr17 44350773 44351483 -45153070 + Tigger3b DNA MER2_type 2 711 -2317 2280 88 3 3 chr17 44351483 44351789 -45152764 + AluSx SINE Alu 1 306 -6 7326 121 35 37 chr17 44351789 44352309 -45152244 + Tigger3b DNA MER2_type 711 1230 -1 2219 108 0 0 chr17 44352875 44353181 -45151372 - AluSx SINE Alu -6 306 1 2139 113 3 0 chr17 44353735 44354035 -45150518 + AluSx SINE Alu 1 301 -11 440 277 91 16 chr17 44354559 44354767 -45149786 + MIR SINE MIR 38 262 0 2490 23 16 7 chr17 44355057 44355364 -45149189 - SVA Other Other -10 1376 1067 1027 82 8 0 chr17 44355365 44355499 -45149054 - AluSp SINE Alu -178 135 1 2622 173 60 52 chr17 44355903 44356391 -45148162 - L1MB7 LINE L1 0 6184 5688 2048 99 0 56 chr17 44356391 44356713 -45147840 - AluSx SINE Alu -8 304 1 2622 173 60 52 chr17 44356713 44356893 -45147660 - L1MB7 LINE L1 -496 5688 5511 220 226 140 11 chr17 44356898 44356991 -45147562 + MIR SINE MIR 139 243 -19 456 100 0 38 chr17 44357278 44357358 -45147195 - AluSc SINE Alu 0 309 233 2309 87 0 0 chr17 44357290 44357590 -45146963 - AluSc SINE Alu -9 300 1 2054 97 4 0 chr17 44357827 44358106 -45146447 + AluSg1 SINE Alu 21 300 -9 1511 173 0 60 chr17 44358106 44358406 -45146147 + AluJo SINE Alu 1 282 -30 510 17 0 0 chr17 44358406 44358465 -45146088 + (TGGA)n Simple_repeat Simple_repeat 2 60 0 536 263 51 32 chr17 44358610 44358766 -45145787 - MIR SINE MIR 0 262 104 2188 88 17 0 chr17 44359822 44360119 -45144434 + AluSx SINE Alu 2 303 -9 373 294 0 0 chr17 44360688 44360773 -45143780 - L2 LINE L2 0 3272 3188 2106 80 21 7 chr17 44360782 44361071 -45143482 + AluSc SINE Alu 1 293 -16 571 270 135 12 chr17 44361192 44361451 -45143102 - L2 LINE L2 0 3313 3023 1953 129 3 7 chr17 44361686 44361980 -45142573 - AluSx SINE Alu -19 293 1 2342 79 0 0 chr17 44362768 44363073 -45141480 + AluY SINE Alu 1 305 -6 2109 105 17 0 chr17 44363421 44363717 -45140836 + AluSx SINE Alu 1 301 -11 2152 119 7 0 chr17 44364009 44364319 -45140234 + AluSx SINE Alu 1 312 0 1619 182 0 0 chr17 44364939 44365219 -45139334 + AluJb SINE Alu 24 303 -9 709 208 0 0 chr17 44365254 44365374 -45139179 + FLAM_A SINE Alu 2 121 -12 42 86 0 0 chr17 44365422 44365527 -45139026 + AT_rich Low_complexity Low_complexity 1 105 0 349 279 14 71 chr17 44365542 44365599 -45138954 + L1ME4a LINE L1 5924 5983 -138 1961 122 0 7 chr17 44365599 44365895 -45138658 + AluSx SINE Alu 5 298 -14 349 279 14 71 chr17 44365895 44365977 -45138576 + L1ME4a LINE L1 5983 6055 -66 2004 92 24 10 chr17 44366678 44366971 -45137582 - AluSx SINE Alu -15 297 1 472 271 94 20 chr17 44367516 44367719 -45136834 - L1MC4 LINE L1 0 8042 7825 1930 109 3 37 chr17 44367719 44368050 -45136503 - AluSx SINE Alu 0 321 1 1868 90 0 8 chr17 44368065 44368321 -45136232 - AluSp SINE Alu -11 302 49 691 108 100 85 chr17 44368363 44368444 -45136109 + AluJo/FLAM SINE Alu 1 86 -216 2030 120 0 19 chr17 44368444 44368752 -45135801 + AluSx SINE Alu 1 302 -10 691 108 100 85 chr17 44368752 44368800 -45135753 + AluJo/FLAM SINE Alu 86 132 -170 1771 151 17 3 chr17 44369038 44369329 -45135224 - AluJb SINE Alu -17 295 1 467 202 85 16 chr17 44369625 44369754 -45134799 - MIR SINE MIR 0 262 125 433 323 104 52 chr17 44369781 44370146 -45134407 + L2 LINE L2 2883 3266 -6 1990 120 17 0 chr17 44370198 44370499 -45134054 - AluSg SINE Alu -4 306 1 2273 95 0 3 chr17 44370507 44370813 -45133740 - AluSp SINE Alu -8 305 1 362 214 0 28 chr17 44371458 44371603 -45132950 + CT-rich Low_complexity Low_complexity 1 141 0 316 239 43 22 chr17 44371821 44371913 -45132640 + L1ME4a LINE L1 5817 5910 -211 360 0 0 0 chr17 44371972 44372012 -45132541 + (TG)n Simple_repeat Simple_repeat 1 40 0 1906 158 3 0 chr17 44372057 44372368 -45132185 + AluJb SINE Alu 1 312 0 1804 148 31 0 chr17 44372709 44372999 -45131554 + AluSx SINE Alu 1 299 -13 1353 146 66 114 chr17 44373068 44373239 -45131314 - Charlie5 DNA MER1_type 0 2624 2446 1628 148 0 11 chr17 44373239 44373503 -45131050 + AluJb SINE Alu 35 295 -17 1353 146 66 114 chr17 44373503 44373742 -45130811 - Charlie5 DNA MER1_type -178 2446 2234 680 181 8 8 chr17 44373751 44373878 -45130675 - MER3 DNA MER1_type -41 168 42 722 98 20 0 chr17 44373957 44374059 -45130494 + L1PA10 LINE L1 6065 6168 0 1985 115 27 0 chr17 44374116 44374411 -45130142 - AluSq SINE Alu -9 304 2 919 134 0 0 chr17 44374615 44374742 -45129811 + FLAM_C SINE Alu 1 127 -6 2131 119 0 0 chr17 44375217 44375520 -45129033 - AluSx SINE Alu -9 303 1 290 81 0 0 chr17 44375948 44375985 -45128568 + tRNA-Glu-GAG tRNA tRNA 1 37 -38 451 275 67 27 chr17 44376707 44376856 -45127697 + L2 LINE L2 3155 3309 -4 973 171 203 16 chr17 44376874 44377028 -45127525 - MER44D DNA MER2_type -1923 568 444 2352 80 0 10 chr17 44377028 44377339 -45127214 - AluY SINE Alu -3 308 1 973 171 203 16 chr17 44377339 44377435 -45127118 - MER44D DNA MER2_type -2047 444 1 765 163 0 0 chr17 44377536 44377659 -45126894 + FLAM_C SINE Alu 1 123 -10 1418 133 9 89 chr17 44377780 44377834 -45126719 - L1MB3 LINE L1 -3 6180 6123 1780 120 62 0 chr17 44377834 44378108 -45126445 - AluSx SINE Alu -21 291 1 1418 133 9 89 chr17 44378108 44378368 -45126185 - L1MB3 LINE L1 -60 6123 5891 2231 79 0 3 chr17 44378815 44379106 -45125447 - AluSc SINE Alu -19 290 1 345 210 25 0 chr17 44379106 44379187 -45125366 + Charlie5 DNA MER1_type 2542 2624 0 559 168 5 17 chr17 44379343 44379480 -45125073 - L1MB3 LINE L1 -200 5981 5852 2104 88 3 3 chr17 44379883 44380168 -45124385 - AluSc SINE Alu -19 290 6 260 271 31 31 chr17 44380172 44380311 -45124242 + CT-rich Low_complexity Low_complexity 1 139 0 21 0 0 0 chr17 44380608 44380629 -45123924 + AT_rich Low_complexity Low_complexity 1 21 0 1451 140 0 18 chr17 44380635 44380863 -45123690 - AluJo SINE Alu -61 251 28 195 210 99 86 chr17 44380912 44380993 -45123560 + MIR SINE MIR 67 148 -60 22 0 0 0 chr17 44381050 44381072 -45123481 + AT_rich Low_complexity Low_complexity 1 22 0 795 217 0 0 chr17 44381144 44381296 -45123257 + FRAM SINE Alu 1 152 -24 312 27 0 0 chr17 44381839 44381876 -45122677 + (GAAA)n Simple_repeat Simple_repeat 1 37 0 283 363 62 18 chr17 44382456 44382569 -45121984 - L2 LINE L2 -8 3264 3147 2267 92 0 3 chr17 44382957 44383262 -45121291 - AluSg SINE Alu -2 308 5 2286 87 0 0 chr17 44384041 44384341 -45120212 - AluY SINE Alu -11 300 1 218 208 21 0 chr17 44384418 44384466 -45120087 + (CTA)n Simple_repeat Simple_repeat 2 50 0 1813 149 0 3 chr17 44385027 44385316 -45119237 + AluJb SINE Alu 6 293 -19 2159 111 0 3 chr17 44385568 44385874 -45118679 - AluSx SINE Alu -7 305 1 1713 176 13 0 chr17 44386687 44386988 -45117565 - AluJo SINE Alu -7 305 1 1651 176 3 17 chr17 44387017 44387318 -45117235 - AluJo SINE Alu -15 297 1 835 187 41 18 chr17 44388183 44388354 -45116199 - AluJo SINE Alu -16 296 122 29 94 0 0 chr17 44388566 44388651 -45115902 + AT_rich Low_complexity Low_complexity 1 85 0 1555 168 0 21 chr17 44389025 44389160 -45115393 + AluSg SINE Alu 1 137 -173 2374 72 0 3 chr17 44389160 44389464 -45115089 + AluSq SINE Alu 1 303 -10 1555 168 0 21 chr17 44389464 44389608 -45114945 + AluSg SINE Alu 137 274 -36 2399 70 0 3 chr17 44389608 44389910 -45114643 + AluSc SINE Alu 1 301 -8 822 200 0 28 chr17 44389910 44390090 -45114463 + AluSg/x SINE Alu 132 306 -4 274 235 62 12 chr17 44390143 44390224 -45114329 - L1ME LINE L1 -304 5817 5733 1957 146 0 9 chr17 44390593 44390908 -45113645 + AluJo SINE Alu 1 312 0 564 282 57 27 chr17 44391285 44391583 -45112970 - L1MC4 LINE L1 0 8042 7736 1110 141 0 6 chr17 44391613 44391790 -45112763 - AluSx SINE Alu -16 294 119 28 71 0 0 chr17 44391790 44391846 -45112707 + AT_rich Low_complexity Low_complexity 1 56 0 2795 16 0 3 chr17 44391848 44392162 -45112391 - SVA Other Other -7 1379 1067 948 126 0 0 chr17 44392163 44392298 -45112255 - AluSx SINE Alu -177 135 1 969 189 265 11 chr17 44392323 44392678 -45111875 - L1MC4 LINE L1 -401 7641 7197 205 349 0 0 chr17 44392802 44392868 -45111685 + CT-rich Low_complexity Low_complexity 2 67 0 2201 111 0 0 chr17 44393241 44393538 -45111015 + AluSx SINE Alu 1 297 -15 1658 118 0 0 chr17 44393781 44394010 -45110543 + AluSx SINE Alu 63 291 -21 183 42 0 0 chr17 44394209 44394233 -45110320 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1927 113 3 11 chr17 44394236 44394519 -45110034 - AluSx SINE Alu -31 281 1 314 136 0 17 chr17 44394737 44394796 -45109757 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 22 0 0 0 chr17 44395249 44395271 -45109282 + AT_rich Low_complexity Low_complexity 1 22 0 1256 253 53 107 chr17 44395792 44395995 -45108558 - L1MC4 LINE L1 0 8042 7830 1930 109 3 37 chr17 44395995 44396326 -45108227 - AluSx SINE Alu 0 321 1 1256 253 53 107 chr17 44396326 44396341 -45108212 - L1MC4 LINE L1 -212 7830 7816 2428 70 0 0 chr17 44396341 44396643 -45107910 - AluSp SINE Alu -11 302 1 1256 253 53 107 chr17 44396643 44396934 -45107619 - L1MC4 LINE L1 -226 7816 7511 2126 114 0 0 chr17 44396934 44397223 -45107330 + AluSq SINE Alu 1 289 -24 1256 253 53 107 chr17 44397223 44397345 -45107208 - L1MC4 LINE L1 -531 7511 7452 1178 209 139 3 chr17 44397345 44397647 -45106906 - MER2 DNA MER2_type -1 343 1 1256 253 53 107 chr17 44397647 44397762 -45106791 - L1MC4 LINE L1 -590 7452 7332 1985 105 0 0 chr17 44397845 44398122 -45106431 + AluSx SINE Alu 32 308 -4 1591 152 15 8 chr17 44398556 44398820 -45105733 + AluJb SINE Alu 30 295 -17 2259 79 3 10 chr17 44400185 44400488 -45104065 + AluSq SINE Alu 1 301 -12 645 252 0 0 chr17 44400494 44400625 -45103928 + FLAM_C SINE Alu 2 132 -1 815 38 22 60 chr17 44400953 44401271 -45103282 + (CA)n Simple_repeat Simple_repeat 1 305 0 387 294 92 0 chr17 44401340 44401459 -45103094 + L2 LINE L2 3137 3266 -6 430 337 35 5 chr17 44402804 44403006 -45101547 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 44403041 44403068 -45101485 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 2139 79 0 54 chr17 44405163 44405479 -45099074 + AluSq SINE Alu 1 299 -14 189 107 0 0 chr17 44406029 44406057 -45098496 + (TG)n Simple_repeat Simple_repeat 1 28 0 1894 129 45 3 chr17 44406190 44406476 -45098077 + AluSx SINE Alu 1 298 -14 658 137 0 0 chr17 44406383 44406478 -45098075 + AluSg/x SINE Alu 204 298 -12 745 167 14 28 chr17 44406492 44406636 -45097917 + FLAM_C SINE Alu 2 143 0 2104 121 0 10 chr17 44407247 44407560 -45096993 + AluSx SINE Alu 1 310 -2 568 284 116 31 chr17 44407605 44407830 -45096723 + MIR SINE MIR 13 256 -6 1633 146 31 14 chr17 44408124 44408412 -45096141 + AluJo SINE Alu 1 293 -19 1272 194 0 5 chr17 44409004 44409220 -45095333 - AluSg/x SINE Alu -8 304 90 461 115 0 0 chr17 44409620 44409681 -45094872 + AluSp/q SINE Alu 229 289 -24 446 275 50 30 chr17 44409719 44409803 -45094750 - L1MC4 LINE L1 -507 7535 7454 1178 209 139 3 chr17 44409803 44410105 -45094448 - MER2 DNA MER2_type -1 343 1 446 275 50 30 chr17 44410105 44410220 -45094333 - L1MC4 LINE L1 -588 7454 7332 1550 149 19 8 chr17 44410303 44410564 -45093989 + AluJb SINE Alu 32 295 -17 688 152 0 0 chr17 44411710 44411815 -45092738 - AluJb SINE Alu -206 106 2 535 214 298 12 chr17 44411816 44411984 -45092569 - Tigger5 DNA MER2_type -2101 222 7 1480 186 25 7 chr17 44412048 44412333 -45092220 + AluJo SINE Alu 1 290 -22 189 315 0 0 chr17 44412356 44412410 -45092143 - L2 LINE L2 -35 3278 3225 1761 124 10 70 chr17 44412810 44413124 -45091429 + AluSx SINE Alu 1 295 -17 2086 90 7 10 chr17 44413124 44413414 -45091139 + AluSq SINE Alu 1 289 -24 645 252 0 0 chr17 44413432 44413563 -45090990 + FLAM_C SINE Alu 2 132 -1 815 38 22 60 chr17 44413891 44414209 -45090344 + (CA)n Simple_repeat Simple_repeat 1 305 0 387 294 92 0 chr17 44414278 44414397 -45090156 + L2 LINE L2 3137 3266 -6 430 337 35 5 chr17 44415743 44415945 -45088608 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 44415980 44416007 -45088546 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 23 0 0 0 chr17 44418060 44418083 -45086470 + GC_rich Low_complexity Low_complexity 1 23 0 267 152 0 0 chr17 44418398 44418444 -45086109 + C-rich Low_complexity Low_complexity 1 46 0 204 245 0 0 chr17 44418512 44418565 -45085988 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 230 122 0 0 chr17 44418567 44418608 -45085945 + LTR66 LTR ERVL 398 438 -172 262 261 23 0 chr17 44418613 44418701 -45085852 - L1MC4 LINE L1 -1339 6703 6614 249 292 0 0 chr17 44418625 44418714 -45085839 + L1MC4 LINE L1 6614 6702 -1340 * 330 294 64 28 chr17 44418719 44418828 -45085725 - L1MC4 LINE L1 -1339 6703 6591 1164 160 9 5 chr17 44419168 44419380 -45085173 + AluJo SINE Alu 88 300 -12 743 188 0 0 chr17 44419542 44419659 -45084894 + FLAM_C SINE Alu 2 118 -25 2055 97 21 0 chr17 44419681 44419970 -45084583 + AluSg SINE Alu 1 295 -15 429 172 81 0 chr17 44420806 44420905 -45083648 + MIR SINE MIR 32 138 -70 2227 97 7 0 chr17 44421230 44421529 -45083024 - AluSx SINE Alu -10 302 2 1660 166 3 3 chr17 44421536 44421826 -45082727 - AluJb SINE Alu -9 303 14 2146 97 0 0 chr17 44423167 44423457 -45081096 + AluSg SINE Alu 14 303 -7 1932 103 21 7 chr17 44423457 44423748 -45080805 + AluSx SINE Alu 1 295 -17 1024 143 12 0 chr17 44423748 44423909 -45080644 + AluSg/x SINE Alu 134 296 -16 394 130 39 0 chr17 44425059 44425136 -45079417 - L1MB4 LINE L1 0 6180 6101 180 0 0 0 chr17 44425197 44425217 -45079336 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 742 142 53 0 chr17 44425222 44425335 -45079218 - AluSg/x SINE Alu -57 253 135 2186 118 0 0 chr17 44425336 44425641 -45078912 - AluSx SINE Alu -7 305 1 348 300 27 0 chr17 44425895 44426005 -45078548 + MIR3 SINE MIR 50 162 -46 1063 192 22 9 chr17 44426009 44426233 -45078320 - AluJo SINE Alu 0 312 86 800 149 0 8 chr17 44426251 44426385 -45078168 - AluJo SINE Alu -175 137 5 362 200 0 3 chr17 44426514 44426592 -45077961 + AluS SINE Alu 1 60 -243 1146 147 5 5 chr17 44426592 44426782 -45077771 + AluSg/x SINE Alu 113 302 -7 356 283 63 72 chr17 44427180 44427211 -45077342 + HAL1b LINE L1 1110 1140 -208 1619 199 0 3 chr17 44427211 44427512 -45077041 + AluJo SINE Alu 1 300 -12 356 283 63 72 chr17 44427512 44427717 -45076836 + HAL1b LINE L1 1140 1344 -4 33 56 0 0 chr17 44427786 44427840 -45076713 + AT_rich Low_complexity Low_complexity 1 54 0 1972 116 0 22 chr17 44427867 44428178 -45076375 - AluSx SINE Alu -8 304 1 227 211 42 105 chr17 44428974 44429069 -45075484 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 44429094 44429289 -45075264 - MSR1 Satellite Satellite 0 182 1 227 211 42 105 chr17 44429394 44429489 -45075064 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 44429514 44429609 -45074944 - MSR1 Satellite Satellite 0 111 23 1780 125 30 43 chr17 44430086 44430389 -45074164 + AluJb SINE Alu 1 299 -13 701 224 0 8 chr17 44430999 44431115 -45073438 + FLAM_C SINE Alu 1 117 -185 195 42 0 0 chr17 44431115 44431139 -45073414 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 701 224 0 8 chr17 44431139 44431156 -45073397 + FLAM_C SINE Alu 117 133 -169 2108 104 10 0 chr17 44431193 44431490 -45073063 + AluSp SINE Alu 2 301 -12 1046 201 0 63 chr17 44431501 44431740 -45072813 + AluJo SINE Alu 1 224 -88 197 377 79 19 chr17 44432417 44432632 -45071921 + L2 LINE L2 2857 3084 -229 1047 218 32 0 chr17 44432827 44433043 -45071510 - MER58A DNA MER1_type 0 224 2 2150 110 3 3 chr17 44433317 44433616 -45070937 + AluSx SINE Alu 1 299 -13 566 223 223 6 chr17 44433695 44433870 -45070683 - MIR SINE MIR -15 247 35 186 352 57 19 chr17 44433950 44434055 -45070498 + L2 LINE L2 2867 2975 -338 1500 115 8 29 chr17 44434064 44434308 -45070245 + AluJo SINE Alu 66 304 -8 2225 93 10 0 chr17 44434569 44434870 -45069683 - AluSc SINE Alu -5 304 1 412 300 110 26 chr17 44434943 44435253 -45069300 - L1M4 LINE L1 -1833 4313 3978 2306 84 0 0 chr17 44435258 44435556 -45068997 + AluY SINE Alu 1 298 -13 316 169 0 0 chr17 44435984 44436043 -45068510 - LTR54 LTR ERV1 -49 461 403 398 170 185 52 chr17 44436069 44436204 -45068349 - MER105 DNA DNA -22 182 30 275 118 141 0 chr17 44436934 44437019 -45067534 - L1ME4a LINE L1 -10 6111 6015 838 175 39 0 chr17 44437047 44437201 -45067352 + AluJb SINE Alu 137 296 -16 30 0 0 0 chr17 44437256 44437286 -45067267 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 44437369 44437389 -45067164 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 684 134 0 0 chr17 44437402 44437499 -45067054 - AluJ/FLAM SINE Alu -214 98 2 2008 124 0 0 chr17 44437514 44437820 -45066733 - AluSx SINE Alu 0 306 1 1864 129 25 0 chr17 44438129 44438438 -45066115 + AluSq SINE Alu 1 316 0 1523 162 42 25 chr17 44438863 44439147 -45065406 + AluJo SINE Alu 1 289 -23 319 355 61 10 chr17 44439376 44439573 -45064980 + MIR SINE MIR 2 208 -54 2254 93 0 7 chr17 44439658 44439968 -45064585 - AluY SINE Alu -3 308 1 420 227 23 38 chr17 44440344 44440476 -45064077 - MIR SINE MIR -1 261 132 192 214 0 0 chr17 44440601 44440657 -45063896 + C-rich Low_complexity Low_complexity 1 56 0 525 209 0 27 chr17 44440720 44440830 -45063723 - AluJb SINE Alu -30 282 176 22 35 0 0 chr17 44440834 44440863 -45063690 + AT_rich Low_complexity Low_complexity 1 29 0 1926 161 3 0 chr17 44441185 44441496 -45063057 - AluJo SINE Alu 0 312 1 360 0 0 0 chr17 44441541 44441581 -45062972 + (CA)n Simple_repeat Simple_repeat 1 40 0 945 236 62 83 chr17 44441640 44441870 -45062683 - L1ME4a LINE L1 -211 5910 5677 7995 13 0 0 chr17 44441870 44442961 -45061592 - L1PA3 LINE L1 0 6155 5071 945 236 62 83 chr17 44442961 44443044 -45061509 - L1ME4a LINE L1 -444 5677 5594 1905 98 69 0 chr17 44443044 44443320 -45061233 - AluSg SINE Alu -15 295 1 945 236 62 83 chr17 44443320 44443648 -45060905 - L1ME4a LINE L1 -527 5594 5256 768 154 0 8 chr17 44443916 44444039 -45060514 + FLAM_A SINE Alu 1 122 -11 33 0 0 0 chr17 44444039 44444072 -45060481 + AT_rich Low_complexity Low_complexity 1 33 0 339 100 17 0 chr17 44444169 44444229 -45060324 + Alu SINE Alu 242 302 0 397 200 61 35 chr17 44444262 44444377 -45060176 + FLAM_C SINE Alu 1 118 -15 4162 108 49 47 chr17 44444636 44445346 -45059207 + Tigger3b DNA MER2_type 2 713 -518 2143 110 3 0 chr17 44445346 44445646 -45058907 + AluSx SINE Alu 1 301 -11 460 277 91 16 chr17 44446170 44446378 -45058175 + MIR SINE MIR 38 262 0 234 0 0 0 chr17 44449700 44449726 -45054827 + (A)n Simple_repeat Simple_repeat 1 26 0 547 206 61 73 chr17 44450467 44450659 -45053894 + MIR3 SINE MIR 4 197 -11 22 0 0 0 chr17 44451409 44451431 -45053122 + GC_rich Low_complexity Low_complexity 1 22 0 26 74 0 0 chr17 44451589 44451643 -45052910 + GC_rich Low_complexity Low_complexity 1 54 0 32 0 0 0 chr17 44451819 44451851 -45052702 + GC_rich Low_complexity Low_complexity 1 32 0 200 205 51 0 chr17 44452979 44453018 -45051535 + L2 LINE L2 3208 3248 -24 2306 90 0 6 chr17 44453162 44453474 -45051079 - AluSg SINE Alu 0 310 1 188 227 0 62 chr17 44453481 44453546 -45051007 + L2 LINE L2 2915 2977 -300 183 250 0 0 chr17 44453739 44453779 -45050774 + L2 LINE L2 3271 3310 -3 976 123 5 96 chr17 44453841 44453938 -45050615 + AluJb SINE Alu 135 208 -104 1308 155 66 69 chr17 44453938 44454117 -45050436 - AluJo SINE Alu 0 302 123 2204 85 0 3 chr17 44454117 44454411 -45050142 + AluSg SINE Alu 1 293 -17 1308 155 66 69 chr17 44454411 44454534 -45050019 - AluJo SINE Alu -179 123 1 976 123 5 96 chr17 44454534 44454623 -45049930 + AluJb SINE Alu 208 304 -8 430 238 122 20 chr17 44454628 44454775 -45049778 + MIR SINE MIR 51 212 -50 2185 83 3 45 chr17 44454924 44455237 -45049316 + AluSp SINE Alu 1 300 -13 343 120 0 186 chr17 44456234 44456271 -45048282 + MIR SINE MIR 51 93 -115 2433 55 0 0 chr17 44456271 44456582 -45047971 + AluY SINE Alu 1 311 0 343 120 0 186 chr17 44456582 44456668 -45047885 + MIR SINE MIR 93 150 -58 307 333 174 10 chr17 44457714 44457749 -45046804 - MIR SINE MIR -19 243 215 1998 110 0 52 chr17 44457749 44458058 -45046495 - AluSx SINE Alu -19 293 1 307 333 174 10 chr17 44458058 44458229 -45046324 - MIR SINE MIR -47 215 3 2246 102 0 0 chr17 44459681 44459985 -45044568 - AluSq SINE Alu -9 304 1 2235 106 0 6 chr17 44460499 44460810 -45043743 - AluSx SINE Alu -3 309 1 2310 72 0 41 chr17 44461356 44461674 -45042879 + AluSp SINE Alu 1 305 -8 309 242 154 23 chr17 44462227 44462358 -45042195 + MIR3 SINE MIR 49 202 -6 317 259 9 89 chr17 44463154 44463266 -45041287 + MIR3 SINE MIR 82 184 -24 212 204 23 0 chr17 44463413 44463457 -45041096 + (CA)n Simple_repeat Simple_repeat 2 46 0 233 263 13 26 chr17 44463494 44463570 -45040983 - MIR3 SINE MIR -20 188 114 25 75 0 0 chr17 44463694 44463747 -45040806 + GC_rich Low_complexity Low_complexity 1 53 0 181 294 20 0 chr17 44465495 44465546 -45039007 + MIR SINE MIR 40 91 -117 346 285 70 19 chr17 44466101 44466259 -45038294 + MIR SINE MIR 8 173 -89 3811 112 0 19 chr17 44466277 44466811 -45037742 - MER1A DNA MER1_type -3 524 1 2244 104 3 3 chr17 44466853 44467162 -45037391 + AluSp SINE Alu 1 309 -4 453 187 33 0 chr17 44467640 44467731 -45036822 + MIR SINE MIR 34 127 -135 2339 85 10 0 chr17 44467735 44468042 -45036511 - AluY SINE Alu 0 311 2 2151 81 0 11 chr17 44468063 44468346 -45036207 - AluSg SINE Alu -30 280 1 180 195 0 24 chr17 44468348 44468389 -45036164 + MIR SINE MIR 125 164 -98 2229 113 0 0 chr17 44468612 44468923 -45035630 - AluSx SINE Alu -1 311 1 210 369 88 42 chr17 44468959 44469351 -45035202 - L2 LINE L2 -4 3268 2831 2217 88 0 3 chr17 44469351 44469647 -45034906 + AluSx SINE Alu 1 295 -17 210 369 88 42 chr17 44469647 44469695 -45034858 - L2 LINE L2 -441 2831 2787 402 239 11 0 chr17 44470049 44470137 -45034416 - L2 LINE L2 -333 2980 2892 825 83 0 0 chr17 44470320 44470429 -45034124 - AluSg/x SINE Alu -16 294 186 190 275 121 22 chr17 44471264 44471355 -45033198 + L2 LINE L2 3155 3254 -18 462 320 39 20 chr17 44471373 44471576 -45032977 - MIR SINE MIR -53 209 3 246 225 14 0 chr17 44471975 44472046 -45032507 - L1M4 LINE L1 -3044 3102 3031 1082 168 11 0 chr17 44472046 44472231 -45032322 - AluSg/x SINE Alu 0 312 126 210 71 0 0 chr17 44472357 44472385 -45032168 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 1543 160 4 26 chr17 44472386 44472655 -45031898 - AluSx SINE Alu -49 263 1 2121 103 10 0 chr17 44473588 44473878 -45030675 - AluSx SINE Alu -18 294 2 2249 67 0 51 chr17 44473891 44474205 -45030348 - AluY SINE Alu -13 298 1 522 322 30 0 chr17 44474648 44474850 -45029703 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 44474885 44474912 -45029641 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 702 152 0 0 chr17 44476968 44477073 -45027480 - AluJb SINE Alu -206 106 2 483 204 18 9 chr17 44477074 44477241 -45027312 - Tigger5 DNA MER2_type -2101 222 7 1558 185 21 11 chr17 44477305 44477592 -45026961 + AluJo SINE Alu 1 290 -22 185 315 0 0 chr17 44477615 44477669 -45026884 - L2 LINE L2 -35 3278 3225 1786 124 10 70 chr17 44478070 44478384 -45026169 + AluSx SINE Alu 1 295 -17 2211 93 7 0 chr17 44478384 44478675 -45025878 + AluSq SINE Alu 1 293 -20 2017 152 0 0 chr17 44478846 44479149 -45025404 + AluSp SINE Alu 1 303 -10 364 297 196 10 chr17 44479204 44479491 -45025062 - L2 LINE L2 -235 3078 2741 1875 144 7 0 chr17 44480338 44480630 -45023923 + AluJo SINE Alu 1 294 -18 2234 106 3 0 chr17 44480639 44480950 -45023603 + AluSp SINE Alu 1 312 -1 356 218 5 153 chr17 44482080 44482138 -45022415 + MIR3 SINE MIR 22 87 -121 2269 98 0 0 chr17 44482138 44482435 -45022118 - AluSx SINE Alu -12 300 4 356 218 5 153 chr17 44482435 44482578 -45021975 + MIR3 SINE MIR 87 193 -15 528 307 70 13 chr17 44485026 44485268 -45019285 + MIR SINE MIR 6 258 -4 253 360 50 10 chr17 44485384 44485484 -45019069 + MIR SINE MIR 43 146 -62 253 284 108 0 chr17 44485652 44485754 -45018799 - MIR SINE MIR -56 152 40 207 0 0 0 chr17 44486197 44486220 -45018333 + (TG)n Simple_repeat Simple_repeat 2 24 0 273 75 0 0 chr17 44486507 44486547 -45018006 + (GA)n Simple_repeat Simple_repeat 2 41 0 241 279 0 0 chr17 44488057 44488125 -45016428 + G-rich Low_complexity Low_complexity 2 69 0 225 65 0 0 chr17 44488798 44488829 -45015724 + (A)n Simple_repeat Simple_repeat 1 31 0 2232 78 13 23 chr17 44490266 44490574 -45013979 - AluY SINE Alu -6 305 1 1011 238 70 17 chr17 44491496 44491642 -45012911 + MER33 DNA MER1_type 6 143 -2442 1906 122 61 0 chr17 44491642 44491936 -45012617 - AluSx SINE Alu 0 312 1 1011 238 70 17 chr17 44491936 44492088 -45012465 + MER33 DNA MER1_type 143 320 -4 930 188 11 0 chr17 44493361 44493537 -45011016 - AluSg/x SINE Alu -1 309 132 1888 134 7 19 chr17 44493537 44493844 -45010709 - AluSq SINE Alu -10 303 1 1870 139 17 0 chr17 44494377 44494678 -45009875 + AluSx SINE Alu 1 306 -6 2197 113 0 0 chr17 44494678 44494987 -45009566 + AluSx SINE Alu 1 309 -3 2195 103 3 0 chr17 44495866 44496167 -45008386 + AluSx SINE Alu 1 302 -10 714 178 31 8 chr17 44496350 44496366 -45008187 - FLAM_C SINE Alu -169 133 119 225 0 0 0 chr17 44496366 44496391 -45008162 + (TG)n Simple_repeat Simple_repeat 2 26 0 714 178 31 8 chr17 44496391 44496503 -45008050 - FLAM_C SINE Alu -183 119 2 1907 141 9 31 chr17 44496524 44496843 -45007710 - AluJb SINE Alu 0 312 1 1253 162 5 9 chr17 44497242 44497458 -45007095 - AluJb SINE Alu -12 300 86 2174 101 3 3 chr17 44499458 44499765 -45004788 + AluSc SINE Alu 2 308 -1 2397 67 3 0 chr17 44500983 44501280 -45003273 - AluSg SINE Alu -12 298 1 2065 148 0 0 chr17 44501644 44501955 -45002598 + AluJo SINE Alu 1 311 -1 2085 102 0 11 chr17 44501955 44502240 -45002313 + AluSg SINE Alu 1 282 -28 195 42 0 0 chr17 44502683 44502707 -45001846 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 780 263 115 11 chr17 44502753 44503129 -45001424 - L1ME3A LINE L1 -211 5951 5536 2050 116 31 0 chr17 44503186 44503478 -45001075 + AluSg SINE Alu 3 303 -7 600 261 119 31 chr17 44503505 44503765 -45000788 - L1ME4a LINE L1 -3 6118 5836 1946 132 27 0 chr17 44503823 44504118 -45000435 - AluSx SINE Alu -9 303 1 2300 93 10 0 chr17 44505524 44505834 -44998719 - AluSp SINE Alu 0 313 1 2430 58 13 3 chr17 44505839 44506147 -44998406 - AluY SINE Alu 0 311 1 565 111 0 0 chr17 44506299 44506380 -44998173 + Tigger3(Golem) DNA MER2_type 13 93 -2936 1172 171 14 24 chr17 44506391 44506601 -44997952 + Tigger3(Golem) DNA MER2_type 2818 3025 -4 1670 181 0 0 chr17 44507077 44507369 -44997184 + AluJb SINE Alu 14 305 -7 1932 103 21 7 chr17 44507369 44507660 -44996893 + AluSx SINE Alu 1 295 -17 1024 143 12 0 chr17 44507660 44507821 -44996732 + AluSg/x SINE Alu 132 294 -16 394 130 39 0 chr17 44508971 44509048 -44995505 - L1MB4 LINE L1 0 6180 6101 180 0 0 0 chr17 44509109 44509129 -44995424 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 742 142 53 0 chr17 44509134 44509247 -44995306 - AluSg/x SINE Alu -57 253 135 2186 118 0 0 chr17 44509248 44509553 -44995000 - AluSx SINE Alu -7 305 1 348 300 27 0 chr17 44509807 44509917 -44994636 + MIR3 SINE MIR 50 162 -46 1063 192 22 9 chr17 44509921 44510145 -44994408 - AluJo SINE Alu 0 312 86 800 149 0 8 chr17 44510163 44510297 -44994256 - AluJo SINE Alu -175 137 5 362 200 0 3 chr17 44510426 44510504 -44994049 + AluS SINE Alu 1 60 -248 1146 147 5 5 chr17 44510504 44510694 -44993859 + AluSg/x SINE Alu 113 302 -7 356 283 63 72 chr17 44511092 44511123 -44993430 + HAL1b LINE L1 1110 1140 -208 1619 199 0 3 chr17 44511123 44511424 -44993129 + AluJo SINE Alu 1 300 -12 356 283 63 72 chr17 44511424 44511629 -44992924 + HAL1b LINE L1 1140 1344 -4 33 56 0 0 chr17 44511698 44511752 -44992801 + AT_rich Low_complexity Low_complexity 1 54 0 1972 116 0 22 chr17 44511779 44512090 -44992463 - AluSx SINE Alu -8 304 1 227 211 42 105 chr17 44512886 44512981 -44991572 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 44513086 44513181 -44991372 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 44513206 44513301 -44991252 - MSR1 Satellite Satellite 0 111 23 1780 125 30 43 chr17 44513778 44514081 -44990472 + AluJb SINE Alu 1 299 -13 701 224 0 8 chr17 44514691 44514807 -44989746 + FLAM_C SINE Alu 1 117 -185 195 42 0 0 chr17 44514807 44514831 -44989722 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 701 224 0 8 chr17 44514831 44514848 -44989705 + FLAM_C SINE Alu 117 133 -169 2108 104 10 0 chr17 44514885 44515182 -44989371 + AluSp SINE Alu 2 301 -12 1046 201 0 63 chr17 44515193 44515432 -44989121 + AluJo SINE Alu 1 224 -88 197 377 79 19 chr17 44516109 44516324 -44988229 + L2 LINE L2 2857 3084 -229 1047 218 32 0 chr17 44516519 44516735 -44987818 - MER58A DNA MER1_type 0 224 2 2150 110 3 3 chr17 44517009 44517308 -44987245 + AluSx SINE Alu 1 299 -13 566 223 223 6 chr17 44517387 44517562 -44986991 - MIR SINE MIR -15 247 35 186 352 57 19 chr17 44517642 44517747 -44986806 + L2 LINE L2 2867 2975 -338 1500 115 8 29 chr17 44517756 44518000 -44986553 + AluJo SINE Alu 66 304 -8 2244 90 10 0 chr17 44518260 44518561 -44985992 - AluSc SINE Alu -5 304 1 412 300 110 26 chr17 44518634 44518944 -44985609 - L1M4 LINE L1 -1833 4313 3978 2311 71 0 3 chr17 44518949 44519243 -44985310 + AluSc SINE Alu 1 293 -16 2046 100 0 17 chr17 44519243 44519542 -44985011 + AluSc SINE Alu 1 294 -15 781 144 0 8 chr17 44519543 44519661 -44984892 - AluJo/FLAM SINE Alu -195 117 1 267 281 60 0 chr17 44519668 44519790 -44984763 - L1P LINE L1 -2477 3669 3547 2376 83 3 0 chr17 44519792 44520104 -44984449 + AluSp SINE Alu 1 313 0 1727 175 0 16 chr17 44520684 44520987 -44983566 - AluJb SINE Alu -14 298 1 2167 90 16 13 chr17 44521715 44522027 -44982526 + AluSq SINE Alu 1 313 0 2725 119 39 2 chr17 44522380 44522793 -44981760 + MSTA LTR MaLR 1 428 0 759 124 7 97 chr17 44523489 44523634 -44980919 - FLAM_C SINE Alu -1 132 1 1227 176 110 15 chr17 44523700 44523972 -44980581 - AluJb SINE Alu -14 298 1 392 296 151 11 chr17 44524010 44524196 -44980357 + MIR SINE MIR 45 256 -6 2114 113 7 0 chr17 44524583 44524883 -44979670 + AluSp SINE Alu 1 302 -11 1391 140 8 25 chr17 44525159 44525395 -44979158 - AluJo SINE Alu -80 232 1 1043 174 15 64 chr17 44525578 44525659 -44978894 - Charlie5 DNA MER1_type 0 2624 2541 2349 88 0 0 chr17 44525659 44525966 -44978587 + AluSc SINE Alu 1 307 -2 1043 174 15 64 chr17 44525966 44526057 -44978496 - Charlie5 DNA MER1_type -83 2541 2467 1416 176 83 0 chr17 44526057 44526335 -44978218 - AluJb SINE Alu -11 301 1 1043 174 15 64 chr17 44526335 44526426 -44978127 - Charlie5 DNA MER1_type -157 2467 2373 1289 121 54 31 chr17 44526576 44526800 -44977753 - AluSg/x SINE Alu -11 299 71 252 229 0 33 chr17 44526803 44526864 -44977689 + AluSq/x SINE Alu 76 134 -168 2268 76 0 0 chr17 44526867 44527155 -44977398 + AluSg SINE Alu 1 288 -22 603 126 0 0 chr17 44527392 44527479 -44977074 + AluSg/x SINE Alu 215 301 -11 1574 133 63 3 chr17 44527603 44527874 -44976679 + MER33 DNA MER1_type 1 284 -40 2181 117 0 0 chr17 44527878 44528216 -44976337 + AluSx SINE Alu 5 342 0 272 204 0 0 chr17 44528221 44528275 -44976278 + MER33 DNA MER1_type 309 362 -1 1708 161 7 3 chr17 44528391 44528682 -44975871 - AluJo SINE Alu -20 292 1 2159 94 17 0 chr17 44528978 44529276 -44975277 - AluSg SINE Alu -7 303 1 2249 101 0 0 chr17 44529335 44529632 -44974921 + AluSg SINE Alu 1 297 -13 316 169 0 0 chr17 44530060 44530119 -44974434 - LTR54 LTR ERV1 -49 461 403 398 170 185 52 chr17 44530145 44530280 -44974273 - MER105 DNA DNA -22 182 30 275 118 141 0 chr17 44531010 44531095 -44973458 - L1ME4a LINE L1 -10 6111 6015 838 175 39 0 chr17 44531123 44531277 -44973276 + AluJb SINE Alu 137 296 -16 30 0 0 0 chr17 44531332 44531362 -44973191 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 44531445 44531465 -44973088 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 684 134 0 0 chr17 44531478 44531575 -44972978 - AluJ/FLAM SINE Alu -214 98 2 2008 124 0 0 chr17 44531590 44531896 -44972657 - AluSx SINE Alu 0 306 1 1864 129 25 0 chr17 44532205 44532514 -44972039 + AluSq SINE Alu 1 316 0 1523 162 42 25 chr17 44532939 44533223 -44971330 + AluJo SINE Alu 1 289 -23 319 355 61 10 chr17 44533452 44533649 -44970904 + MIR SINE MIR 2 208 -54 2254 93 0 7 chr17 44533734 44534044 -44970509 - AluY SINE Alu -3 308 1 867 206 18 96 chr17 44534420 44534587 -44969966 - MIR SINE MIR -1 261 121 2497 56 0 0 chr17 44534587 44534890 -44969663 + AluY SINE Alu 1 303 -8 867 206 18 96 chr17 44534890 44534994 -44969559 - MIR SINE MIR -141 121 11 885 118 0 22 chr17 44535005 44535140 -44969413 - FLAM_C SINE Alu 0 133 2 2173 111 3 0 chr17 44535171 44535469 -44969084 + AluSp SINE Alu 1 299 -14 382 307 93 57 chr17 44535513 44535813 -44968740 + L3 LINE CR1 971 1281 -296 282 253 117 45 chr17 44535885 44536007 -44968546 + MER5B DNA MER1_type 1 138 -40 2004 107 10 10 chr17 44536007 44536305 -44968248 + AluSq SINE Alu 1 298 -15 282 253 117 45 chr17 44536305 44536336 -44968217 + MER5B DNA MER1_type 138 165 -13 299 298 21 0 chr17 44536407 44536501 -44968052 + MER5B DNA MER1_type 9 104 -74 343 339 27 54 chr17 44536574 44536940 -44967613 - L2 LINE L2 -524 2790 2369 415 323 37 6 chr17 44537190 44537351 -44967202 + L2 LINE L2 2617 2782 -532 716 226 28 60 chr17 44537357 44537574 -44966979 + MIR SINE MIR 32 241 -21 220 198 198 0 chr17 44537660 44537741 -44966812 + L2 LINE L2 2862 2958 -314 212 313 0 16 chr17 44537748 44537812 -44966741 - MIR SINE MIR -198 64 2 * 435 239 15 104 chr17 44537812 44537938 -44966615 + L2 LINE L2 3199 3312 -1 1791 149 0 27 chr17 44538264 44538560 -44965993 - AluJb SINE Alu -24 288 1 1506 108 0 0 chr17 44539388 44539591 -44964962 - AluSq SINE Alu -110 203 1 1403 239 118 18 chr17 44539850 44540342 -44964211 + MLT1G LTR MaLR 2 590 0 2279 100 0 0 chr17 44540453 44540763 -44963790 - AluSg SINE Alu 0 310 1 1738 249 38 59 chr17 44540787 44541198 -44963355 + L2 LINE L2 2151 2548 -766 2001 148 0 0 chr17 44541198 44541503 -44963050 + AluSx SINE Alu 1 305 -7 1738 249 38 59 chr17 44541503 44541666 -44962887 + L2 LINE L2 2548 2713 -601 2142 104 0 3 chr17 44541672 44541980 -44962573 + AluSx SINE Alu 6 312 0 1081 133 6 22 chr17 44541981 44542162 -44962391 + AluSg/x SINE Alu 118 295 -15 727 234 258 31 chr17 44542166 44542655 -44961898 + L2 LINE L2 2710 3312 -1 769 176 15 0 chr17 44542866 44542997 -44961556 + FLAM_A SINE Alu 1 133 0 1670 138 0 0 chr17 44543260 44543530 -44961023 - AluSx SINE Alu 0 308 39 3227 84 4 34 chr17 44543547 44543888 -44960665 - L1PA14 LINE L1 0 6161 5835 1962 100 11 4 chr17 44543888 44544195 -44960358 + AluSg SINE Alu 1 309 0 3227 84 4 34 chr17 44544195 44544326 -44960227 - L1PA14 LINE L1 -326 5835 5702 1567 171 13 44 chr17 44544447 44544763 -44959790 - AluJo SINE Alu 0 312 7 1823 114 71 0 chr17 44544779 44545060 -44959493 - AluSx SINE Alu -11 301 1 2268 61 0 58 chr17 44545060 44545372 -44959181 - AluSx SINE Alu -18 294 1 1620 128 86 21 chr17 44545427 44545717 -44958836 - AluSx SINE Alu -3 309 1 379 205 26 0 chr17 44545733 44545811 -44958742 - L1MEd LINE L1 -6037 82 3 657 308 23 52 chr17 44545813 44546160 -44958393 - L2 LINE L2 -753 2561 2225 2137 94 0 16 chr17 44546197 44546504 -44958049 + AluSp SINE Alu 1 302 -11 1947 116 0 30 chr17 44546508 44546809 -44957744 + AluSq SINE Alu 1 292 -21 4052 143 51 12 chr17 44546824 44547509 -44957044 + L1MC2 LINE L1 5442 6153 -191 838 243 0 0 chr17 44547509 44547682 -44956871 + FRAM SINE Alu 1 173 -3 962 168 42 0 chr17 44547688 44547878 -44956675 + L1MC2 LINE L1 6132 6329 -15 2080 114 10 3 chr17 44547878 44548186 -44956367 + AluSq SINE Alu 1 310 -3 1273 131 5 0 chr17 44548188 44548387 -44956166 + AluSg/x SINE Alu 111 310 -2 25 0 0 0 chr17 44548390 44548415 -44956138 + AT_rich Low_complexity Low_complexity 1 25 0 2422 44 14 0 chr17 44548416 44548711 -44955842 + AluY SINE Alu 1 299 -12 2294 98 0 7 chr17 44549134 44549441 -44955112 + AluSq SINE Alu 1 305 -8 275 183 268 63 chr17 44549522 44549664 -44954889 - MIR SINE MIR -86 176 6 30 27 0 0 chr17 44550316 44550353 -44954200 + AT_rich Low_complexity Low_complexity 1 37 0 2195 100 3 3 chr17 44550358 44550669 -44953884 + AluSp SINE Alu 3 313 0 2217 103 0 0 chr17 44550680 44550981 -44953572 + AluSg SINE Alu 1 301 -9 948 194 11 0 chr17 44550995 44551175 -44953378 + Charlie1 DNA MER1_type 1834 2015 -746 1527 82 0 0 chr17 44551177 44551373 -44953180 + AluSc SINE Alu 101 296 -13 2243 86 0 0 chr17 44551375 44551667 -44952886 + AluY SINE Alu 1 292 -19 888 135 147 0 chr17 44552043 44552199 -44952354 - AluSg/x SINE Alu -4 306 128 1292 84 0 0 chr17 44552793 44552960 -44951593 - AluSg/x SINE Alu -9 301 135 2003 125 13 3 chr17 44553054 44553357 -44951196 - AluSx SINE Alu -6 306 1 1967 97 42 7 chr17 44554844 44555133 -44949420 - AluSg SINE Alu -11 299 1 2206 91 0 13 chr17 44555192 44555499 -44949054 - AluSx SINE Alu -9 303 1 1107 185 10 0 chr17 44555528 44555733 -44948820 + AluJo SINE Alu 86 292 -20 553 369 53 4 chr17 44555740 44555984 -44948569 - MIR SINE MIR 0 262 7 2342 56 0 23 chr17 44556254 44556559 -44947994 + AluY SINE Alu 1 298 -13 195 322 68 48 chr17 44556837 44556983 -44947570 + L2 LINE L2 2887 3035 -237 783 254 125 9 chr17 44557053 44557277 -44947276 - MIR SINE MIR 0 262 13 2464 80 10 0 chr17 44557454 44557753 -44946800 - AluY SINE Alu -9 302 1 2097 113 0 0 chr17 44557893 44558167 -44946386 - AluSx SINE Alu -38 274 1 890 110 0 22 chr17 44558177 44558313 -44946240 - FLAM_C SINE Alu 0 133 1 2344 46 4 7 chr17 44558919 44559239 -44945314 - AluY SINE Alu 0 320 2 2006 141 0 3 chr17 44559368 44559658 -44944895 - AluJb SINE Alu -15 297 9 318 200 0 0 chr17 44559791 44559846 -44944707 + MER3 DNA MER1_type 2 56 -153 2281 120 0 0 chr17 44560037 44560336 -44944217 + AluSx SINE Alu 1 299 -13 2438 87 0 3 chr17 44560811 44561110 -44943443 + AluSg SINE Alu 3 300 -10 217 261 92 69 chr17 44561149 44561279 -44943274 + MIR SINE MIR 55 187 -75 197 128 0 26 chr17 44561306 44561345 -44943208 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 507 211 19 0 chr17 44561400 44561504 -44943049 - FLAM_A SINE Alu -36 106 1 1861 108 12 15 chr17 44565496 44565584 -44938969 + AluSg SINE Alu 44 131 -179 2337 107 0 0 chr17 44565584 44565883 -44938670 + AluSq SINE Alu 1 299 -14 1861 108 12 15 chr17 44565883 44566053 -44938500 + AluSg SINE Alu 131 301 -9 2182 110 45 0 chr17 44566124 44566415 -44938138 - AluSq SINE Alu -9 304 1 1660 187 26 30 chr17 44566441 44566746 -44937807 + AluJo SINE Alu 1 304 -8 2537 68 10 7 chr17 44566770 44567078 -44937475 + AluSq SINE Alu 1 309 -4 2145 138 0 0 chr17 44567164 44567460 -44937093 + AluSx SINE Alu 1 296 -16 294 375 46 29 chr17 44567481 44567721 -44936832 + L2 LINE L2 2852 3095 -177 724 256 24 49 chr17 44567800 44568046 -44936507 - MIR SINE MIR 0 262 23 24 0 0 0 chr17 44568153 44568177 -44936376 + AT_rich Low_complexity Low_complexity 1 24 0 2260 100 3 0 chr17 44568184 44568473 -44936080 + AluSx SINE Alu 1 290 -22 730 205 42 96 chr17 44568479 44568718 -44935835 - MIR SINE MIR 0 262 37 387 103 0 0 chr17 44568745 44568803 -44935750 - LTR26B LTR ERV1 -473 58 1 2503 76 0 10 chr17 44569136 44569450 -44935103 - AluY SINE Alu 0 311 1 821 166 23 69 chr17 44569450 44569617 -44934936 - AluSg/x SINE Alu -15 295 135 181 277 134 17 chr17 44569731 44569850 -44934703 + L2 LINE L2 2827 2959 -313 2339 118 0 6 chr17 44569979 44570292 -44934261 - AluSx SINE Alu -1 311 1 2226 94 3 62 chr17 44570292 44570612 -44933941 - AluSx SINE Alu -11 301 1 1317 163 3 113 chr17 44570615 44570952 -44933601 - AluJb SINE Alu -1 301 2 2119 54 0 61 chr17 44571363 44571643 -44932910 - AluY SINE Alu -11 300 38 397 226 10 18 chr17 44571770 44571896 -44932657 + MIR SINE MIR 32 153 -68 1109 83 0 0 chr17 44571987 44572119 -44932434 + AluSp SINE Alu 1 132 -181 2176 103 7 7 chr17 44572121 44572421 -44932132 + AluSq SINE Alu 1 300 -13 348 267 30 0 chr17 44572432 44572533 -44932020 + MIR SINE MIR 159 262 0 2482 78 3 7 chr17 44572813 44573119 -44931434 - AluSp SINE Alu -1 312 8 403 98 16 0 chr17 44573122 44573183 -44931370 + Alu SINE Alu 227 288 -22 398 93 0 0 chr17 44573186 44573240 -44931313 + Alu SINE Alu 3 56 -247 2419 103 0 3 chr17 44573422 44573733 -44930820 + AluSx SINE Alu 1 310 -2 1879 183 0 0 chr17 44573744 44574039 -44930514 + AluJo SINE Alu 1 295 -17 238 277 73 66 chr17 44574039 44574176 -44930377 + L1MC4a LINE L1 5633 5770 -2038 257 281 210 14 chr17 44574177 44574458 -44930095 + L1MC4a LINE L1 5830 6165 -1643 2459 66 7 3 chr17 44575717 44576022 -44928531 - AluSp SINE Alu -3 310 5 2192 122 16 0 chr17 44576028 44576332 -44928221 - AluSx SINE Alu -3 309 1 376 259 65 9 chr17 44576375 44576483 -44928070 - MER5A DNA MER1_type -68 121 8 1752 152 65 0 chr17 44577528 44577805 -44926748 - AluJo SINE Alu -15 297 3 1785 143 47 40 chr17 44577896 44578012 -44926541 + AluJo SINE Alu 1 115 -197 186 43 0 0 chr17 44578012 44578035 -44926518 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1785 143 47 40 chr17 44578035 44578218 -44926335 + AluJo SINE Alu 115 302 -10 2464 64 0 7 chr17 44578218 44578514 -44926039 + AluY SINE Alu 1 294 -17 1851 138 35 0 chr17 44578723 44579031 -44925522 - AluSx SINE Alu 0 312 1 2248 97 4 0 chr17 44579059 44579338 -44925215 + AluSc SINE Alu 1 280 -29 207 100 0 0 chr17 44579338 44579368 -44925185 + (TAAG)n Simple_repeat Simple_repeat 2 31 0 342 0 0 0 chr17 44579725 44579763 -44924790 + (TG)n Simple_repeat Simple_repeat 1 38 0 2143 122 14 0 chr17 44580078 44580372 -44924181 + AluSx SINE Alu 1 298 -14 2446 97 3 3 chr17 44580376 44580687 -44923866 + AluSp SINE Alu 1 311 -2 831 289 53 48 chr17 44580810 44580861 -44923692 - L2 LINE L2 -106 3207 3158 2098 98 3 80 chr17 44580861 44581188 -44923365 + AluSx SINE Alu 1 302 -10 831 289 53 48 chr17 44581188 44581313 -44923240 - L2 LINE L2 -155 3158 3035 1466 205 48 0 chr17 44581313 44581623 -44922930 - AluJo SINE Alu 0 323 1 831 289 53 48 chr17 44581623 44581818 -44922735 - L2 LINE L2 -278 3035 2832 378 258 16 127 chr17 44581854 44581920 -44922633 - L1ME4a LINE L1 -199 5922 5850 2375 91 0 10 chr17 44581920 44582217 -44922336 + AluSx SINE Alu 1 294 -18 378 258 16 127 chr17 44582217 44582336 -44922217 - L1ME4a LINE L1 -271 5850 5768 1975 152 3 3 chr17 44582336 44582632 -44921921 + AluJo SINE Alu 1 296 -16 378 258 16 127 chr17 44582632 44582689 -44921864 - L1ME4a LINE L1 -353 5768 5706 653 282 50 64 chr17 44583202 44583324 -44921229 - L3 LINE CR1 -11 1566 1444 2266 117 7 0 chr17 44583324 44583624 -44920929 + AluSx SINE Alu 1 302 -10 653 282 50 64 chr17 44583624 44583799 -44920754 - L3 LINE CR1 -133 1444 1273 1936 148 17 3 chr17 44584010 44584307 -44920246 + AluSx SINE Alu 1 301 -11 321 68 0 0 chr17 44585687 44585731 -44918822 + (TG)n Simple_repeat Simple_repeat 2 45 0 859 61 0 0 chr17 44588316 44588415 -44916138 - AluY SINE Alu -219 99 1 31 0 0 0 chr17 44588634 44588665 -44915888 + AT_rich Low_complexity Low_complexity 1 31 0 1345 77 29 0 chr17 44588665 44588835 -44915718 - AluSx SINE Alu -137 175 1 322 284 52 0 chr17 44588975 44589109 -44915444 + L1MB7 LINE L1 5893 6033 -151 2148 117 6 25 chr17 44589114 44589431 -44915122 - AluSx SINE Alu -1 311 1 477 0 0 0 chr17 44589444 44589497 -44915056 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 252 186 0 0 chr17 44589500 44589543 -44915010 - MER57A LTR ERV1 -65 338 296 567 136 79 7 chr17 44589543 44589683 -44914870 + L1MB8 LINE L1 6024 6173 -5 1768 162 6 41 chr17 44589686 44590000 -44914553 + AluJo SINE Alu 1 303 -9 1521 132 25 29 chr17 44590177 44590419 -44914134 + AluJo SINE Alu 67 307 -5 445 169 12 0 chr17 44590424 44590507 -44914046 + MER67C LTR ERV1 361 444 -266 2306 93 7 29 chr17 44590508 44590818 -44913735 + AluSq SINE Alu 1 303 -10 1567 154 25 31 chr17 44590823 44590905 -44913648 + MER67C LTR ERV1 361 442 -268 2459 107 0 0 chr17 44590905 44591215 -44913338 + AluSx SINE Alu 1 310 -2 1567 154 25 31 chr17 44591215 44591441 -44913112 + MER67C LTR ERV1 442 669 -41 2362 110 7 0 chr17 44591441 44591751 -44912802 - AluSx SINE Alu 0 312 1 1940 155 13 0 chr17 44592308 44592611 -44911942 - AluJo SINE Alu -5 307 1 494 269 7 28 chr17 44592618 44592763 -44911790 - MIR SINE MIR -90 172 31 255 103 0 0 chr17 44592931 44592970 -44911583 + (CTG)n Simple_repeat Simple_repeat 3 41 0 220 309 86 12 chr17 44594342 44594450 -44910103 - MIR SINE MIR -54 208 109 2255 129 3 0 chr17 44594450 44594753 -44909800 + AluSx SINE Alu 1 304 -8 2111 116 7 7 chr17 44594753 44595046 -44909507 + AluSx SINE Alu 1 293 -19 220 309 86 12 chr17 44595046 44595098 -44909455 - MIR SINE MIR -152 110 35 1100 262 78 24 chr17 44597085 44597455 -44907098 + LTR16C LTR ERVL 89 478 -13 711 183 15 0 chr17 44597988 44598119 -44906434 + FLAM_A SINE Alu 1 133 0 245 319 128 7 chr17 44598454 44598595 -44905958 + L2 LINE L2 3095 3252 -20 2329 121 0 3 chr17 44598604 44598918 -44905635 + AluSq SINE Alu 1 313 0 1513 185 45 11 chr17 44599104 44599391 -44905162 + AluJo SINE Alu 1 297 -15 2650 45 10 0 chr17 44599394 44599702 -44904851 + AluY SINE Alu 1 311 0 423 206 0 0 chr17 44599717 44599730 -44904823 + GA-rich Low_complexity Low_complexity 3 15 -89 2494 93 3 0 chr17 44599730 44600042 -44904511 + AluSp SINE Alu 1 313 0 423 206 0 0 chr17 44600042 44600130 -44904423 + GA-rich Low_complexity Low_complexity 14 104 0 1966 148 6 31 chr17 44600138 44600455 -44904098 + AluSq SINE Alu 1 309 -4 356 322 69 23 chr17 44601338 44601512 -44903041 - MIR SINE MIR -2 260 79 241 263 42 32 chr17 44601729 44601824 -44902729 - L2 LINE L2 -189 3083 2988 219 69 0 0 chr17 44602003 44602032 -44902521 + (CTG)n Simple_repeat Simple_repeat 3 31 0 1279 154 165 18 chr17 44602758 44603030 -44901523 + AluJo SINE Alu 1 312 0 476 58 0 14 chr17 44603034 44603103 -44901450 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2740 121 25 16 chr17 44603410 44603850 -44900703 + MLT1C LTR MaLR 24 467 0 2221 107 0 0 chr17 44603871 44604197 -44900356 + AluSx SINE Alu 1 326 0 325 250 207 6 chr17 44604670 44604836 -44899717 - MIR SINE MIR -59 203 5 21 82 0 0 chr17 44605473 44605522 -44899031 + GC_rich Low_complexity Low_complexity 1 49 0 803 206 153 5 chr17 44606978 44607187 -44897366 - MIR SINE MIR -21 241 2 438 280 70 19 chr17 44607771 44607928 -44896625 + MIR3 SINE MIR 21 185 -23 1792 117 9 66 chr17 44609013 44609163 -44895390 + AluJo SINE Alu 1 125 -187 2223 86 17 0 chr17 44609163 44609453 -44895100 + AluSp SINE Alu 1 295 -18 1792 117 9 66 chr17 44609453 44609619 -44894934 + AluJo SINE Alu 125 299 -13 2268 119 3 0 chr17 44609689 44610000 -44894553 + AluSx SINE Alu 1 312 0 243 313 0 0 chr17 44611032 44611096 -44893457 - L2 LINE L2 -2 3311 3248 226 361 83 8 chr17 44611228 44611361 -44893192 - L2 LINE L2 -5 3267 3125 186 301 91 51 chr17 44611526 44611702 -44892851 - L2 LINE L2 -208 3064 2882 423 282 64 13 chr17 44612175 44612331 -44892222 - MIR SINE MIR -48 214 51 1067 134 12 6 chr17 44612339 44612511 -44892042 + AluSc SINE Alu 83 255 -54 2376 62 16 7 chr17 44612511 44612818 -44891735 + AluY SINE Alu 1 310 -1 535 256 70 83 chr17 44613753 44613929 -44890624 + MIR SINE MIR 9 183 -79 414 0 0 0 chr17 44613929 44613975 -44890578 + (TG)n Simple_repeat Simple_repeat 2 47 0 535 256 70 83 chr17 44613975 44614040 -44890513 + MIR SINE MIR 183 247 -15 1790 94 117 8 chr17 44614040 44614306 -44890247 + AluSc SINE Alu 1 295 -14 260 257 100 0 chr17 44614989 44615059 -44889494 - L2 LINE L2 -294 2978 2902 * 523 352 78 28 chr17 44615055 44615635 -44888918 + L2 LINE L2 2365 2973 -341 279 336 172 0 chr17 44615861 44615977 -44888576 + L2 LINE L2 3117 3252 -20 208 200 0 0 chr17 44616456 44616501 -44888052 - MIR SINE MIR -75 133 89 214 191 43 0 chr17 44616526 44616573 -44887980 - L2 LINE L2 -3 3269 3221 211 301 11 43 chr17 44616643 44616736 -44887817 + L2 LINE L2 3159 3248 -24 2105 129 0 0 chr17 44617132 44617435 -44887118 + AluSx SINE Alu 1 303 -9 2430 81 0 0 chr17 44617442 44617752 -44886801 + AluY SINE Alu 2 311 0 1981 155 0 0 chr17 44617838 44618148 -44886405 - AluSg SINE Alu 0 310 1 362 326 50 7 chr17 44618213 44618354 -44886199 - L2 LINE L2 -5 3267 3121 2273 119 3 0 chr17 44618946 44619257 -44885296 + AluSx SINE Alu 1 312 0 231 302 16 0 chr17 44620289 44620352 -44884201 - L2 LINE L2 -2 3311 3248 221 349 91 8 chr17 44620484 44620616 -44883937 - L2 LINE L2 -5 3267 3125 423 282 64 13 chr17 44621428 44621584 -44882969 - MIR SINE MIR -48 214 51 1067 134 12 6 chr17 44621592 44621764 -44882789 + AluSc SINE Alu 83 255 -54 2376 62 16 7 chr17 44621764 44622071 -44882482 + AluY SINE Alu 1 310 -1 535 256 70 83 chr17 44623006 44623182 -44881371 + MIR SINE MIR 9 183 -79 414 0 0 0 chr17 44623182 44623228 -44881325 + (TG)n Simple_repeat Simple_repeat 2 47 0 535 256 70 83 chr17 44623228 44623293 -44881260 + MIR SINE MIR 183 247 -15 1790 94 117 8 chr17 44623293 44623559 -44880994 + AluSc SINE Alu 1 295 -14 260 257 100 0 chr17 44624242 44624312 -44880241 - L2 LINE L2 -294 2978 2902 * 300 344 41 44 chr17 44624308 44624628 -44879925 + L2 LINE L2 2365 2683 -631 324 206 82 10 chr17 44624940 44625037 -44879516 - MIR SINE MIR -70 138 35 2308 102 0 9 chr17 44626741 44627056 -44877497 - AluSx SINE Alu 0 312 1 2211 95 13 0 chr17 44627056 44627358 -44877195 - AluSx SINE Alu -4 308 1 321 285 88 57 chr17 44628680 44628873 -44875680 - L2 LINE L2 -5 3308 3110 2137 123 0 0 chr17 44628963 44629256 -44875297 + AluSx SINE Alu 1 293 -19 1691 110 49 4 chr17 44629665 44629911 -44874642 + AluSx SINE Alu 56 312 0 532 287 94 5 chr17 44629921 44630123 -44874430 + MIR SINE MIR 37 256 -6 2322 84 6 6 chr17 44630627 44630938 -44873615 + AluY SINE Alu 1 311 0 359 294 110 7 chr17 44630945 44631081 -44873472 + MER5A DNA MER1_type 40 189 0 207 0 0 0 chr17 44632364 44632387 -44872166 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1668 176 6 32 chr17 44632391 44632703 -44871850 + AluJo SINE Alu 1 304 -8 296 229 28 107 chr17 44632705 44632905 -44871648 + Charlie8 DNA MER1_type 148 1406 -1011 261 246 103 15 chr17 44632909 44633064 -44871489 - MER5A DNA MER1_type -11 178 58 2271 96 3 3 chr17 44634544 44634856 -44869697 - AluSp SINE Alu -1 312 1 1649 82 143 4 chr17 44635106 44635384 -44869169 - AluSg1 SINE Alu 0 313 2 461 111 56 0 chr17 44635891 44635963 -44868590 - MADE1 DNA Mariner -4 76 1 792 161 0 0 chr17 44635984 44636108 -44868445 - FLAM_C SINE Alu -19 124 1 1845 155 14 0 chr17 44636310 44636607 -44867946 + AluSx SINE Alu 1 301 -11 1710 180 0 3 chr17 44636609 44636892 -44867661 - AluJo SINE Alu -30 282 1 2767 139 82 57 chr17 44636952 44637492 -44867061 + MLT2B3 LTR ERVL 1 553 -1 314 320 88 7 chr17 44637567 44637714 -44866839 + MLT1K LTR MaLR 216 374 -214 1937 134 3 0 chr17 44637714 44638021 -44866532 - AluSx SINE Alu 0 308 1 442 241 0 48 chr17 44638031 44638167 -44866386 - MLT1A2 LTR MaLR -216 158 28 1971 151 13 0 chr17 44638167 44638466 -44866087 + AluSx SINE Alu 2 304 -8 649 127 0 17 chr17 44638486 44638604 -44865949 + (GAAA)n Simple_repeat Simple_repeat 1 116 0 719 238 111 41 chr17 44638932 44639176 -44865377 + MIR SINE MIR 2 262 0 217 205 0 0 chr17 44639234 44639273 -44865280 + CT-rich Low_complexity Low_complexity 3 41 0 222 298 0 0 chr17 44639499 44639556 -44864997 + A-rich Low_complexity Low_complexity 5 61 0 954 168 0 0 chr17 44639943 44640098 -44864455 - FRAM SINE Alu -18 158 4 2013 122 0 44 chr17 44640491 44640810 -44863743 - AluSx SINE Alu -7 305 1 673 121 40 0 chr17 44642403 44642502 -44862051 + FLAM_C SINE Alu 14 116 -27 2345 68 6 3 chr17 44642546 44642857 -44861696 - AluSp SINE Alu -1 312 1 2189 114 0 7 chr17 44643242 44643549 -44861004 - AluSx SINE Alu -7 305 1 24 0 0 0 chr17 44644891 44644915 -44859638 + AT_rich Low_complexity Low_complexity 1 24 0 2211 109 3 6 chr17 44645352 44645665 -44858888 - AluSp SINE Alu -1 312 1 2217 109 0 3 chr17 44645665 44645967 -44858586 - AluSx SINE Alu -11 301 1 1971 156 3 0 chr17 44645968 44646275 -44858278 - AluJb SINE Alu -4 308 1 762 242 16 21 chr17 44647312 44647506 -44857047 + MER106A DNA MER1_type 1 193 -43 2095 87 63 0 chr17 44647506 44647792 -44856761 + AluSc SINE Alu 1 304 -5 1818 116 98 3 chr17 44647799 44648084 -44856469 + AluSx SINE Alu 1 312 0 847 134 0 8 chr17 44648149 44648276 -44856277 + AluJb SINE Alu 1 126 -186 1269 143 4 48 chr17 44649268 44649499 -44855054 - AluJo SINE Alu -7 305 85 2156 115 3 0 chr17 44649505 44649801 -44854752 - AluSx SINE Alu -13 299 3 1831 98 0 56 chr17 44649805 44650092 -44854461 - AluSx SINE Alu -14 298 28 1659 136 32 44 chr17 44650251 44650567 -44853986 + AluJb SINE Alu 1 312 0 2114 114 0 16 chr17 44650859 44651166 -44853387 - AluSx SINE Alu -8 304 3 715 214 8 0 chr17 44651379 44651505 -44853048 - FLAM_A SINE Alu -6 127 1 191 132 0 110 chr17 44651867 44651958 -44852595 + (TCCCC)n Simple_repeat Simple_repeat 2 82 0 584 303 39 6 chr17 44652218 44652396 -44852157 + MIR3 SINE MIR 15 198 -10 1951 145 10 6 chr17 44652398 44652709 -44851844 + AluJb SINE Alu 1 312 0 1462 111 32 161 chr17 44652932 44653053 -44851500 + AluJo SINE Alu 5 140 -162 2095 148 7 0 chr17 44653053 44653363 -44851190 + AluSx SINE Alu 1 312 0 1462 111 32 161 chr17 44653363 44653583 -44850970 + AluJo SINE Alu 140 302 0 2095 176 80 84 chr17 44654067 44654141 -44850412 + MER7C DNA MER2_type 2 75 -2953 1997 140 0 16 chr17 44654141 44654448 -44850105 + AluSx SINE Alu 1 302 -10 2095 176 80 84 chr17 44654448 44654708 -44849845 + MER7C DNA MER2_type 75 335 -2693 1624 101 0 5 chr17 44654708 44654926 -44849627 - AluSq SINE Alu -91 222 6 2095 176 80 84 chr17 44654926 44655194 -44849359 + MER7C DNA MER2_type 335 602 0 2459 68 3 0 chr17 44655196 44655503 -44849050 - AluSp SINE Alu -5 308 1 1634 148 18 7 chr17 44655566 44655850 -44848703 + L1MA4 LINE L1 6013 6299 -1 1748 160 0 29 chr17 44655889 44656201 -44848352 + AluJo SINE Alu 8 310 -2 2088 102 10 0 chr17 44656258 44656583 -44847970 - AluSx SINE Alu 0 312 1 306 0 0 0 chr17 44656855 44656889 -44847664 + (TG)n Simple_repeat Simple_repeat 2 35 0 222 91 0 0 chr17 44659410 44659443 -44845110 + (CACCC)n Simple_repeat Simple_repeat 5 37 0 1602 139 41 71 chr17 44660887 44661181 -44843372 - AluJb SINE Alu -25 287 3 1161 60 0 0 chr17 44661214 44661348 -44843205 + AluSg1 SINE Alu 1 134 -175 1800 86 74 4 chr17 44661348 44661591 -44842962 + AluSp SINE Alu 1 260 -53 266 176 0 73 chr17 44661709 44661777 -44842776 + AluYb8 SINE Alu 246 308 0 529 295 20 7 chr17 44661944 44662093 -44842460 - MIR3 SINE MIR -41 167 17 2274 112 0 16 chr17 44662731 44663045 -44841508 - AluSc SINE Alu 0 309 1 243 119 0 0 chr17 44663045 44663087 -44841466 - AluJb SINE Alu -3 298 257 1531 140 0 0 chr17 44663087 44663301 -44841252 - AluJb SINE Alu -87 225 12 1023 149 17 29 chr17 44663307 44663481 -44841072 - AluJb SINE Alu -3 309 138 2247 88 0 46 chr17 44663776 44663936 -44840617 - AluSx SINE Alu -19 293 152 2413 84 0 0 chr17 44663936 44664232 -44840321 - AluY SINE Alu -15 296 1 2247 88 0 46 chr17 44664232 44664378 -44840175 - AluSx SINE Alu -160 152 1 2254 124 0 0 chr17 44664444 44664743 -44839810 - AluSq SINE Alu -14 299 1 374 262 154 0 chr17 44664797 44664946 -44839607 - L1MC4a LINE L1 -1897 5911 5740 1976 149 0 43 chr17 44664997 44665319 -44839234 - AluJb SINE Alu -4 308 1 1965 106 74 3 chr17 44666007 44666291 -44838262 - AluSq SINE Alu -9 304 1 2150 85 53 0 chr17 44666291 44666572 -44837981 - AluSx SINE Alu -16 296 1 1646 189 7 33 chr17 44666582 44666888 -44837665 - AluJb SINE Alu -14 298 1 1514 139 0 0 chr17 44667670 44667893 -44836660 + AluJb SINE Alu 84 306 -6 515 138 224 0 chr17 44667920 44668036 -44836517 - FLAM_C SINE Alu 0 143 2 2079 141 3 31 chr17 44668171 44668491 -44836062 - AluJb SINE Alu -1 311 1 489 156 222 0 chr17 44668503 44668593 -44835960 - FLAM_C SINE Alu -19 124 15 480 156 42 0 chr17 44668654 44668750 -44835803 - L1MB8 LINE L1 -7 6171 6072 2120 166 87 80 chr17 44668834 44669132 -44835421 - MER92B LTR ERV1 -47 589 295 1861 89 0 4 chr17 44669132 44669369 -44835184 - AluSp SINE Alu -15 298 63 2120 166 87 80 chr17 44669369 44669396 -44835157 - MER92B LTR ERV1 -341 295 270 2303 101 7 0 chr17 44669396 44669692 -44834861 - AluSx SINE Alu -8 304 7 2120 166 87 80 chr17 44669692 44669950 -44834603 - MER92B LTR ERV1 -366 270 1 1614 146 42 0 chr17 44669950 44670238 -44834315 - L1MB7 LINE L1 -154 6030 5731 812 166 14 0 chr17 44670238 44670377 -44834176 - FRAM SINE Alu -15 161 21 2335 100 0 0 chr17 44670391 44670680 -44833873 - AluSg SINE Alu -21 289 1 195 386 75 4 chr17 44670721 44670975 -44833578 + L2 LINE L2 2400 2671 -643 253 393 58 13 chr17 44671009 44671233 -44833320 - L2 LINE L2 -635 2679 2446 2325 107 0 3 chr17 44671233 44671531 -44833022 + AluSx SINE Alu 1 297 -15 651 207 25 84 chr17 44671532 44671576 -44832977 + L1MC5 LINE L1 7022 7067 -911 1991 148 24 0 chr17 44671576 44671867 -44832686 + AluSq SINE Alu 1 298 -15 651 207 25 84 chr17 44671867 44672063 -44832490 + L1MC5 LINE L1 7067 7245 -733 829 123 0 0 chr17 44672136 44672250 -44832303 + AluJb SINE Alu 183 296 -16 701 246 28 5 chr17 44672250 44672461 -44832092 + L1MC5 LINE L1 7662 7877 -84 534 202 150 64 chr17 44672467 44672700 -44831853 - MER2 DNA MER2_type -3 342 90 705 43 0 0 chr17 44672700 44672793 -44831760 + (TATTG)n Simple_repeat Simple_repeat 2 94 0 2207 101 0 0 chr17 44672794 44673082 -44831471 - AluSx SINE Alu -24 288 1 253 323 42 10 chr17 44673093 44673189 -44831364 + MIR SINE MIR 149 247 -15 2199 104 7 7 chr17 44673875 44674164 -44830389 + AluSx SINE Alu 1 289 -23 2415 91 3 0 chr17 44674164 44674462 -44830091 + AluSx SINE Alu 1 299 -13 2312 119 3 0 chr17 44674619 44674931 -44829622 - AluSq SINE Alu 0 313 1 2238 98 17 3 chr17 44674978 44675275 -44829278 - AluSx SINE Alu -11 301 1 1667 214 88 35 chr17 44675301 44675847 -44828706 - L1MC4 LINE L1 -138 7904 7330 1150 207 13 9 chr17 44675851 44676035 -44828518 - AluSg/x SINE Alu -14 298 111 201 39 0 0 chr17 44676035 44676061 -44828492 + (GA)n Simple_repeat Simple_repeat 1 26 0 1150 207 13 9 chr17 44676061 44676108 -44828445 - AluSg/x SINE Alu -201 111 66 1843 138 18 4 chr17 44676108 44676383 -44828170 + AluSx SINE Alu 1 279 -33 38 22 0 0 chr17 44676514 44676559 -44827994 + AT_rich Low_complexity Low_complexity 1 45 0 562 105 0 0 chr17 44676560 44676636 -44827917 - AluJ/FLAM SINE Alu -235 77 2 2149 86 25 18 chr17 44676638 44676939 -44827614 - AluSx SINE Alu 0 303 1 1452 167 3 109 chr17 44676940 44677269 -44827284 - AluJo SINE Alu -6 296 3 372 167 17 0 chr17 44677294 44677354 -44827199 - U7 snRNA snRNA -2 61 1 2306 111 3 0 chr17 44677468 44677775 -44826778 - AluSx SINE Alu -1 311 4 746 117 23 8 chr17 44677777 44677905 -44826648 + L1MB8 LINE L1 6047 6176 -2 753 194 31 0 chr17 44677960 44678089 -44826464 - FLAM_C SINE Alu 0 133 1 255 216 103 10 chr17 44678125 44678222 -44826331 + L1MC4a LINE L1 6164 6269 -1539 1158 246 42 67 chr17 44678223 44678703 -44825850 + L1MC4a LINE L1 6397 6864 -944 479 278 37 51 chr17 44678707 44678923 -44825630 + L1ME LINE L1 472 684 -5846 863 223 0 0 chr17 44678948 44679105 -44825448 + FAM SINE Alu 1 157 -18 1886 122 107 0 chr17 44679105 44679375 -44825178 - AluSx SINE Alu -10 302 4 194 105 26 0 chr17 44679391 44679429 -44825124 + (CAA)n Simple_repeat Simple_repeat 2 40 0 364 240 107 16 chr17 44679431 44679552 -44825001 + L1ME LINE L1 719 850 -5680 1182 115 0 0 chr17 44679581 44679737 -44824816 + AluJb SINE Alu 157 312 0 906 136 0 0 chr17 44679841 44679966 -44824587 - FLAM_C SINE Alu -18 125 1 2829 169 21 4 chr17 44679966 44680494 -44824059 - L1MB8 LINE L1 -142 6036 5500 1466 140 0 35 chr17 44680522 44680598 -44823955 + AluSx SINE Alu 63 140 -164 2266 117 0 0 chr17 44680598 44680905 -44823648 + AluY SINE Alu 1 307 -4 1466 140 0 35 chr17 44680905 44681078 -44823475 + AluSx SINE Alu 140 304 0 388 90 75 0 chr17 44681080 44681147 -44823406 - L1MB8 LINE L1 -13 6165 6094 405 0 0 0 chr17 44681215 44681260 -44823293 + (TG)n Simple_repeat Simple_repeat 2 46 0 1370 119 0 0 chr17 44681267 44681444 -44823109 - AluSc SINE Alu -15 294 118 1100 231 51 27 chr17 44681496 44681650 -44822903 - AluJo SINE Alu 0 302 153 198 0 0 0 chr17 44681650 44681672 -44822881 + (TA)n Simple_repeat Simple_repeat 2 23 0 1100 231 51 27 chr17 44681672 44681812 -44822741 - AluJo SINE Alu -149 153 1 2283 95 10 3 chr17 44681824 44682118 -44822435 - AluSx SINE Alu -16 296 1 1475 156 53 34 chr17 44682118 44682438 -44822115 - L1MB4 LINE L1 -43 6137 5812 22 35 0 0 chr17 44682440 44682469 -44822084 + AT_rich Low_complexity Low_complexity 1 29 0 2098 127 3 25 chr17 44682473 44682788 -44821765 + AluSx SINE Alu 3 310 -2 642 89 0 0 chr17 44682791 44682881 -44821672 + (GA)n Simple_repeat Simple_repeat 1 90 0 2041 161 89 51 chr17 44682884 44682949 -44821604 + L1ME LINE L1 1523 1584 -4956 2437 75 3 10 chr17 44682949 44683257 -44821296 + AluY SINE Alu 1 306 -5 2041 161 89 51 chr17 44683257 44683635 -44820918 + L1ME LINE L1 1584 1946 -4594 2269 120 0 0 chr17 44683635 44683935 -44820618 + AluSx SINE Alu 1 300 -12 2041 161 89 51 chr17 44683935 44684015 -44820538 + L1ME LINE L1 1946 2021 -4519 2403 52 42 3 chr17 44684015 44684304 -44820249 + AluY SINE Alu 12 311 0 2041 161 89 51 chr17 44684304 44684348 -44820205 + L1ME LINE L1 2021 2114 -4426 1281 171 8 21 chr17 44684348 44684588 -44819965 - MLT1B LTR MaLR 0 390 154 1041 66 44 0 chr17 44684590 44684727 -44819826 + AluSp SINE Alu 1 143 -170 2072 112 0 24 chr17 44684764 44685051 -44819502 - AluSx SINE Alu -32 280 1 2341 114 0 6 chr17 44685062 44685377 -44819176 - AluSp SINE Alu 0 313 1 535 146 100 9 chr17 44685377 44685487 -44819066 - MLT1B LTR MaLR -270 120 1 7655 46 4 37 chr17 44685509 44687102 -44817451 + SVA Other Other 1 1385 -1 1785 148 27 133 chr17 44687119 44687310 -44817243 + L1ME LINE L1 2110 2320 -4220 2526 97 0 0 chr17 44687310 44687621 -44816932 + AluSx SINE Alu 1 311 -1 1785 148 27 133 chr17 44687621 44687719 -44816834 + L1ME LINE L1 2320 2427 -4113 2728 27 0 3 chr17 44687719 44688020 -44816533 + AluY SINE Alu 1 300 -11 1785 148 27 133 chr17 44688020 44688186 -44816367 + L1ME LINE L1 2427 2609 -3931 1565 172 45 35 chr17 44688186 44688476 -44816077 - AluJo SINE Alu -19 293 1 1785 148 27 133 chr17 44688476 44688544 -44816009 + L1ME LINE L1 2609 2683 -3857 2151 124 0 7 chr17 44688544 44688842 -44815711 + AluSx SINE Alu 1 296 -16 2279 84 7 17 chr17 44688844 44689130 -44815423 + AluSp SINE Alu 1 285 -28 198 0 0 0 chr17 44689130 44689152 -44815401 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1785 148 27 133 chr17 44689162 44689211 -44815342 + L1ME LINE L1 2684 2629 -3911 2334 107 7 0 chr17 44689211 44689519 -44815034 - AluSx SINE Alu 0 312 3 1425 233 3 7 chr17 44689553 44689849 -44814704 + AluJo SINE Alu 1 295 -17 1630 144 115 15 chr17 44689851 44690121 -44814432 + AluSg1 SINE Alu 1 297 -12 257 371 48 9 chr17 44690122 44690227 -44814326 - L2 LINE L2 -20 3293 3185 2162 107 3 25 chr17 44690970 44691289 -44813264 + AluSx SINE Alu 1 312 0 1613 180 26 62 chr17 44691307 44691459 -44813094 + MLT1C LTR MaLR 59 215 -252 2278 123 7 0 chr17 44691459 44691769 -44812784 + AluSx SINE Alu 1 312 0 1613 180 26 62 chr17 44691769 44691966 -44812587 + MLT1C LTR MaLR 215 417 -50 1777 142 0 48 chr17 44691966 44692276 -44812277 - AluJb SINE Alu -17 295 1 2083 144 3 0 chr17 44692278 44692583 -44811970 - AluSq SINE Alu -7 306 1 1613 180 26 62 chr17 44692583 44692651 -44811902 + MLT1C LTR MaLR 418 465 -2 2108 125 3 7 chr17 44692960 44693257 -44811296 - AluSq SINE Alu -17 296 1 684 170 7 35 chr17 44693411 44693552 -44811001 + MIR SINE MIR 114 250 -12 418 290 47 9 chr17 44693583 44693690 -44810863 + L2 LINE L2 3141 3251 -21 232 250 17 17 chr17 44694861 44694921 -44809632 + MIR SINE MIR 88 147 -61 1938 88 81 0 chr17 44695067 44695350 -44809203 + AluSg SINE Alu 1 306 -4 2332 73 19 35 chr17 44695350 44695664 -44808889 + AluSg SINE Alu 1 309 -1 30 27 0 0 chr17 44695893 44695930 -44808623 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr17 44698436 44698457 -44806096 + AT_rich Low_complexity Low_complexity 1 21 0 1978 103 21 14 chr17 44698573 44698874 -44805679 + AluSg SINE Alu 3 310 0 1896 146 7 32 chr17 44699004 44699313 -44805240 + AluJo SINE Alu 1 301 -11 2354 105 3 6 chr17 44699486 44699799 -44804754 - AluSx SINE Alu 0 312 1 31 44 0 0 chr17 44699828 44699873 -44804680 + AT_rich Low_complexity Low_complexity 1 45 0 832 136 0 8 chr17 44699873 44699991 -44804562 - FLAM_C SINE Alu -15 118 2 1567 216 83 48 chr17 44699991 44700078 -44804475 - L1ME2 LINE L1 -32 6132 6050 2033 93 100 4 chr17 44700078 44700357 -44804196 - AluSx SINE Alu -4 308 3 1567 216 83 48 chr17 44700357 44700732 -44803821 - L1ME2 LINE L1 -114 6050 5646 2579 148 30 19 chr17 44700732 44701159 -44803394 - Tigger2a DNA MER2_type 0 434 3 1567 216 83 48 chr17 44701159 44701240 -44803313 - L1ME2 LINE L1 -518 5646 5569 207 282 0 28 chr17 44701433 44701447 -44803106 + (TATG)n Simple_repeat Simple_repeat 4 17 -55 2368 94 0 7 chr17 44701447 44701755 -44802798 - AluSg SINE Alu -4 306 1 207 282 0 28 chr17 44701755 44701811 -44802742 + (TATG)n Simple_repeat Simple_repeat 17 72 0 258 300 0 0 chr17 44701876 44701936 -44802617 + L2 LINE L2 3205 3264 -8 2146 133 0 3 chr17 44702044 44702346 -44802207 - AluSx SINE Alu -11 301 1 2206 105 3 10 chr17 44702348 44702643 -44801910 - AluSx SINE Alu -19 293 1 2328 92 3 7 chr17 44702743 44703035 -44801518 + AluSx SINE Alu 5 295 -17 2537 58 0 0 chr17 44703923 44704216 -44800337 + AluY SINE Alu 1 293 -18 587 289 112 35 chr17 44704223 44704455 -44800098 - MIR SINE MIR -6 256 7 25 51 0 0 chr17 44704908 44704947 -44799606 + AT_rich Low_complexity Low_complexity 1 39 0 3386 83 10 8 chr17 44705305 44705788 -44798765 - L1MA4A LINE L1 -12 6291 5808 234 0 0 0 chr17 44705900 44705926 -44798627 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1608 190 0 8 chr17 44705936 44706204 -44798349 - AluSx SINE Alu -46 266 1 2282 103 0 16 chr17 44706380 44706691 -44797862 - AluSx SINE Alu -6 306 1 1901 108 4 0 chr17 44706702 44706953 -44797600 - AluSq SINE Alu -17 296 45 2126 109 0 0 chr17 44707896 44708190 -44796363 + AluSx SINE Alu 1 294 -18 2444 53 0 7 chr17 44708194 44708495 -44796058 + AluY SINE Alu 1 299 -12 1841 148 7 0 chr17 44708507 44708797 -44795756 + AluJb SINE Alu 1 292 -20 2074 133 0 0 chr17 44709107 44709408 -44795145 - AluSx SINE Alu -9 303 3 33 25 0 0 chr17 44709452 44709492 -44795061 + AT_rich Low_complexity Low_complexity 1 40 0 2292 72 0 0 chr17 44709499 44709790 -44794763 + AluSg SINE Alu 1 291 -19 668 236 81 0 chr17 44709882 44710030 -44794523 + MER5A DNA MER1_type 30 189 0 2147 99 3 3 chr17 44711062 44711356 -44793197 - AluSg SINE Alu -16 294 1 1458 86 101 0 chr17 44712479 44712688 -44791865 - MER30 DNA MER1_type 0 230 1 261 0 0 0 chr17 44713641 44713670 -44790883 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3611 35 0 9 chr17 44714995 44715425 -44789128 + L1PA5 LINE L1 5725 6150 -4 25 0 0 0 chr17 44715425 44715450 -44789103 + AT_rich Low_complexity Low_complexity 1 25 0 1980 123 0 17 chr17 44715966 44716266 -44788287 - AluSx SINE Alu -17 295 1 1776 138 3 14 chr17 44717970 44718267 -44786286 - AluJb SINE Alu -7 305 12 1842 137 23 20 chr17 44718271 44718577 -44785976 - AluSx SINE Alu -5 307 1 814 183 0 0 chr17 44718618 44718760 -44785793 + FLAM_C SINE Alu 2 143 0 1940 138 3 0 chr17 44718907 44719196 -44785357 - AluSx SINE Alu -22 290 1 1994 157 0 0 chr17 44719196 44719502 -44785051 - AluJb SINE Alu -6 306 1 2222 106 3 0 chr17 44719670 44719972 -44784581 + AluSx SINE Alu 1 303 -9 2077 116 0 17 chr17 44720470 44720634 -44783919 - AluSx SINE Alu -15 297 139 2091 130 0 0 chr17 44720634 44720941 -44783612 - AluSx SINE Alu -5 307 1 2077 116 0 17 chr17 44720941 44721078 -44783475 - AluSx SINE Alu -173 139 1 2164 50 18 7 chr17 44721092 44721418 -44783135 - AluY SINE Alu 0 329 1 2247 105 0 3 chr17 44721899 44722212 -44782341 - AluSx SINE Alu 0 312 1 1531 140 18 36 chr17 44722584 44722905 -44781648 - AluJo SINE Alu 0 312 16 186 43 0 0 chr17 44722998 44723021 -44781532 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2272 86 0 0 chr17 44723194 44723486 -44781067 + AluSg SINE Alu 1 292 -18 2288 77 0 10 chr17 44724509 44724822 -44779731 + AluY SINE Alu 1 310 -1 216 143 20 20 chr17 44724911 44724960 -44779593 + (CATAG)n Simple_repeat Simple_repeat 1 49 0 231 296 0 0 chr17 44724961 44725015 -44779538 - MIR SINE MIR -62 146 93 190 247 144 62 chr17 44725108 44725205 -44779348 - L2 LINE L2 -26 3246 3142 1427 174 62 10 chr17 44725529 44725798 -44778755 - AluJo SINE Alu -7 305 19 2067 108 10 7 chr17 44725798 44726094 -44778459 + AluSx SINE Alu 1 297 -15 1427 174 62 10 chr17 44726094 44726112 -44778441 - AluJo SINE Alu -293 19 3 2160 97 0 25 chr17 44726125 44726445 -44778108 - AluSq SINE Alu -1 312 1 202 284 231 50 chr17 44726452 44727015 -44777538 - L2 LINE L2 -608 2706 2042 461 215 19 0 chr17 44727405 44727512 -44777041 - L1MA10 LINE L1 -11 6323 6215 1279 175 6 117 chr17 44727764 44728089 -44776464 - AluJo SINE Alu -12 290 2 267 140 20 0 chr17 44728089 44728139 -44776414 - AluJo SINE Alu -166 136 86 807 146 7 22 chr17 44728140 44728277 -44776276 - AluJo SINE Alu -176 136 2 2240 67 0 55 chr17 44728363 44728546 -44776007 - AluY SINE Alu 0 311 152 2088 105 3 10 chr17 44728546 44728851 -44775702 - AluSq SINE Alu -10 303 1 2240 67 0 55 chr17 44728851 44728996 -44775557 - AluY SINE Alu -159 152 1 708 139 0 9 chr17 44728996 44729104 -44775449 + FLAM_C SINE Alu 27 133 -10 1955 105 0 0 chr17 44729155 44729421 -44775132 + AluSq SINE Alu 1 266 -47 2264 89 0 3 chr17 44729493 44729795 -44774758 + AluSp SINE Alu 1 301 -12 1996 133 0 7 chr17 44729802 44730095 -44774458 + AluSx SINE Alu 1 291 -21 1336 196 10 87 chr17 44730583 44730895 -44773658 + AluJo SINE Alu 2 289 -13 1806 112 35 14 chr17 44731032 44731317 -44773236 + AluSx SINE Alu 3 293 -19 875 141 8 0 chr17 44731701 44731829 -44772724 + FLAM_A SINE Alu 1 129 -4 465 148 0 12 chr17 44731833 44731914 -44772639 - MADE1 DNA Mariner 0 80 1 1781 85 125 0 chr17 44732896 44733168 -44771385 + AluSx SINE Alu 5 310 -2 1813 122 14 10 chr17 44733656 44733944 -44770609 + AluSx SINE Alu 1 289 -23 536 142 53 89 chr17 44733951 44734120 -44770433 + L1MC5 LINE L1 7384 7546 -415 1854 136 10 7 chr17 44734121 44734423 -44770130 + AluSx SINE Alu 1 303 -9 304 127 9 136 chr17 44734444 44734492 -44770061 + L1MC5 LINE L1 7611 7639 -322 2223 92 0 10 chr17 44734492 44734796 -44769757 + AluSg1 SINE Alu 1 301 -8 304 127 9 136 chr17 44734796 44734857 -44769696 + L1MC5 LINE L1 7639 7706 -255 795 60 0 35 chr17 44734858 44734974 -44769579 + AluSc SINE Alu 2 113 -196 606 125 0 0 chr17 44734972 44735060 -44769493 + Alu SINE Alu 218 305 -6 * 1539 121 59 22 chr17 44735068 44735366 -44769187 + AluSq SINE Alu 1 308 0 346 200 0 0 chr17 44735366 44735431 -44769122 + L1MC5 LINE L1 7702 7766 -195 26 30 0 0 chr17 44735614 44735647 -44768906 + AT_rich Low_complexity Low_complexity 1 33 0 2247 54 7 0 chr17 44735650 44735949 -44768604 + AluY SINE Alu 1 301 0 2198 111 0 0 chr17 44736293 44736600 -44767953 + AluSx SINE Alu 1 307 -5 2108 108 3 3 chr17 44736611 44736907 -44767646 + AluSx SINE Alu 1 296 -16 814 141 0 35 chr17 44737063 44737205 -44767348 + FLAM_C SINE Alu 3 139 -4 1756 173 3 6 chr17 44737308 44737620 -44766933 + AluJb SINE Alu 1 311 -1 2194 116 0 3 chr17 44738522 44738832 -44765721 - AluSg SINE Alu -1 309 1 2013 121 3 25 chr17 44738864 44739179 -44765374 + AluSx SINE Alu 1 308 -4 191 306 0 0 chr17 44741736 44741785 -44762768 + MER5B DNA MER1_type 3 51 -127 1989 115 3 26 chr17 44742172 44742338 -44762215 - AluSg SINE Alu -12 298 141 2055 112 0 13 chr17 44742338 44742643 -44761910 - AluSx SINE Alu -9 303 3 1989 115 3 26 chr17 44742643 44742781 -44761772 - AluSg SINE Alu -169 141 1 603 245 95 66 chr17 44742786 44742931 -44761622 - L1MC/D LINE L1 -1985 5823 5684 2022 130 0 3 chr17 44742931 44743232 -44761321 - AluSx SINE Alu -12 300 1 603 245 95 66 chr17 44743232 44743359 -44761194 - L1MC/D LINE L1 -2124 5684 5543 390 305 0 46 chr17 44743369 44743520 -44761033 - MER5A DNA MER1_type -45 144 1 306 312 109 55 chr17 44747379 44747799 -44756754 - L2 LINE L2 0 3272 2830 1656 110 4 27 chr17 44748409 44748672 -44755881 + AluSx SINE Alu 1 257 -55 392 264 125 64 chr17 44748690 44748846 -44755707 - L2 LINE L2 -1217 2097 1952 2091 84 24 7 chr17 44748846 44749133 -44755420 + AluSx SINE Alu 1 292 -20 392 264 125 64 chr17 44749133 44749271 -44755282 - L2 LINE L2 -1362 1952 1785 459 140 29 118 chr17 44752317 44752349 -44752204 + MER53 DNA DNA 3 36 -153 2280 88 0 13 chr17 44752349 44752655 -44751898 + AluSx SINE Alu 1 302 -10 459 140 29 118 chr17 44752655 44752671 -44751882 + MER53 DNA DNA 36 52 -137 2230 84 0 7 chr17 44752671 44752968 -44751585 + AluSp SINE Alu 1 295 -18 459 140 29 118 chr17 44752968 44753054 -44751499 + MER53 DNA DNA 52 126 -63 2108 96 0 10 chr17 44754170 44754486 -44750067 + AluSx SINE Alu 3 312 0 3361 180 46 40 chr17 44760627 44761029 -44743524 + L1MB8 LINE L1 4781 5179 -999 2255 71 3 10 chr17 44761029 44761326 -44743227 + AluSx SINE Alu 2 296 -16 3361 180 46 40 chr17 44761326 44761648 -44742905 + L1MB8 LINE L1 5179 5498 -680 2420 53 0 7 chr17 44761648 44761947 -44742606 + AluY SINE Alu 1 297 -14 3361 180 46 40 chr17 44761947 44762062 -44742491 + L1MB8 LINE L1 5498 5611 -567 2151 111 0 0 chr17 44762062 44762351 -44742202 + AluSg SINE Alu 1 289 -21 3361 180 46 40 chr17 44762351 44762865 -44741688 + L1MB8 LINE L1 5611 6135 -43 1154 133 0 0 chr17 44762865 44763023 -44741530 - AluSg/x SINE Alu -21 291 134 2184 95 10 0 chr17 44763023 44763317 -44741236 - AluSq SINE Alu -16 297 1 2079 107 3 7 chr17 44763592 44763923 -44740630 - AluSq SINE Alu 0 313 1 2505 61 0 0 chr17 44763951 44764261 -44740292 - AluY SINE Alu -1 310 1 1281 168 84 35 chr17 44764884 44765169 -44739384 + AluSx SINE Alu 1 299 -3 243 0 0 0 chr17 44765201 44765228 -44739325 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1406 172 0 0 chr17 44765333 44765565 -44738988 - AluJb SINE Alu -41 271 40 1544 169 30 34 chr17 44765594 44765631 -44738922 - AluJb SINE Alu -16 296 260 3722 116 4 4 chr17 44765631 44766142 -44738411 - MER9 LTR ERVK 0 511 1 1544 169 30 34 chr17 44766142 44766400 -44738153 - AluJb SINE Alu -52 260 2 426 228 31 24 chr17 44766510 44766637 -44737916 + MIR3 SINE MIR 15 142 -66 234 150 0 0 chr17 44766637 44766677 -44737876 - MER41A LTR ERV1 0 554 515 2458 54 0 3 chr17 44766748 44767046 -44737507 + AluY SINE Alu 2 298 -13 862 154 26 0 chr17 44767059 44767138 -44737415 + MER84 LTR ERVI 7 83 -424 1662 146 54 17 chr17 44767138 44767433 -44737120 + AluSx SINE Alu 1 306 -6 862 154 26 0 chr17 44767433 44767509 -44737044 + MER84 LTR ERVI 83 166 -341 21 0 0 0 chr17 44767511 44767532 -44737021 + AT_rich Low_complexity Low_complexity 1 21 0 1081 217 0 0 chr17 44767532 44767744 -44736809 - MLT1A1 LTR MaLR -57 308 97 892 132 31 0 chr17 44767786 44767945 -44736608 + MER84 LTR ERVI 285 448 -59 456 108 14 0 chr17 44768015 44768089 -44736464 + Alu SINE Alu 231 305 -6 1210 194 4 13 chr17 44768203 44768435 -44736118 - AluJb SINE Alu -40 272 43 1628 174 31 14 chr17 44768468 44768755 -44735798 - AluJo SINE Alu -19 293 2 397 252 31 24 chr17 44768865 44768992 -44735561 + MIR3 SINE MIR 15 142 -66 249 150 0 0 chr17 44768992 44769032 -44735521 - MER41B LTR ERV1 0 635 596 381 132 44 0 chr17 44769101 44769169 -44735384 + MER84 LTR ERVI 7 77 -430 422 153 0 0 chr17 44769169 44769228 -44735325 + AluSx SINE Alu 25 83 -230 206 244 12 47 chr17 44769231 44769317 -44735236 + (CGG)n Simple_repeat Simple_repeat 3 85 0 * 218 204 0 0 chr17 44769274 44769318 -44735235 + (CAG)n Simple_repeat Simple_repeat 1 44 0 28 29 0 0 chr17 44769335 44769370 -44735183 + GC_rich Low_complexity Low_complexity 1 35 0 291 122 0 0 chr17 44769385 44769434 -44735119 + (CCG)n Simple_repeat Simple_repeat 2 50 0 2311 54 0 0 chr17 44769685 44769992 -44734561 - AluY SINE Alu 0 311 5 2511 62 0 0 chr17 44769999 44770307 -44734246 - AluY SINE Alu -3 308 1 968 142 58 0 chr17 44771410 44771565 -44732988 + AluSx SINE Alu 71 234 -76 254 228 0 0 chr17 44771569 44771626 -44732927 + MER84 LTR ERVI 74 130 -377 186 71 0 0 chr17 44771629 44771657 -44732896 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1849 112 0 51 chr17 44771659 44771807 -44732746 - AluSx SINE Alu -33 279 152 2350 70 3 0 chr17 44771807 44772108 -44732445 - AluY SINE Alu -8 303 2 1849 112 0 51 chr17 44772108 44772253 -44732300 - AluSx SINE Alu -160 152 1 2583 125 26 2 chr17 44772256 44772713 -44731840 - MER41B LTR ERV1 -167 468 1 472 332 89 38 chr17 44772800 44773192 -44731361 + L2 LINE L2 2861 3272 0 25 105 0 0 chr17 44773504 44773599 -44730954 + GC_rich Low_complexity Low_complexity 1 95 0 30 77 0 0 chr17 44773660 44773725 -44730828 + GC_rich Low_complexity Low_complexity 1 65 0 396 306 32 16 chr17 44773946 44774070 -44730483 + MIR SINE MIR 60 185 -77 1008 73 7 0 chr17 44774883 44775019 -44729534 + AluY SINE Alu 1 137 -174 276 64 0 0 chr17 44775021 44775068 -44729485 + Alu SINE Alu 261 307 -1 357 299 145 45 chr17 44775256 44775477 -44729076 + L2 LINE L2 3030 3272 0 2273 92 3 0 chr17 44776027 44776322 -44728231 + AluSx SINE Alu 1 296 -16 563 207 27 0 chr17 44776323 44776434 -44728119 + MIR SINE MIR 31 144 -118 207 191 0 0 chr17 44776610 44776652 -44727901 + L2 LINE L2 3006 3047 -225 2088 124 0 0 chr17 44777031 44777330 -44727223 + AluSx SINE Alu 13 311 -1 1895 82 19 4 chr17 44777332 44777599 -44726954 + L1PA8 LINE L1 5902 6172 0 2392 81 0 0 chr17 44777602 44777910 -44726643 + AluY SINE Alu 1 308 -3 190 276 57 9 chr17 44777965 44778070 -44726483 - L2 LINE L2 -274 2998 2889 323 326 118 0 chr17 44778559 44778703 -44725850 + MIR SINE MIR 10 170 -92 198 0 0 0 chr17 44779013 44779035 -44725518 + (CAG)n Simple_repeat Simple_repeat 1 22 0 303 303 41 25 chr17 44779044 44779093 -44725460 + MER5A DNA MER1_type 62 109 -80 2025 112 10 7 chr17 44779093 44779254 -44725299 - AluSq SINE Alu -16 297 133 2164 114 0 3 chr17 44779254 44779551 -44725002 - AluSx SINE Alu -16 296 1 2025 112 10 7 chr17 44779551 44779685 -44724868 - AluSq SINE Alu -180 133 1 1882 163 0 0 chr17 44779689 44779977 -44724576 - AluSx SINE Alu -20 292 5 303 303 41 25 chr17 44779977 44780044 -44724509 + MER5A DNA MER1_type 111 185 -4 189 0 0 0 chr17 44781761 44781782 -44722771 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 961 166 0 12 chr17 44781782 44781929 -44722624 - AluSg/x SINE Alu -32 280 134 1981 149 0 0 chr17 44781929 44782224 -44722329 - AluSx SINE Alu -17 295 1 961 166 0 12 chr17 44782224 44782239 -44722314 - AluSg/x SINE Alu -178 134 120 1714 197 8 36 chr17 44782280 44782671 -44721882 - MER21A LTR ERV1 0 931 552 297 140 18 0 chr17 44782677 44782734 -44721819 - Alu SINE Alu -2 300 243 1374 189 29 32 chr17 44782734 44783015 -44721538 - AluJb SINE Alu -32 280 1 2249 148 57 82 chr17 44783017 44783579 -44720974 - MER21A LTR ERV1 -374 557 10 262 248 9 0 chr17 44785074 44785160 -44719393 - MIR SINE MIR -75 133 45 229 268 0 0 chr17 44785280 44785336 -44719217 + (CTGGGG)n Simple_repeat Simple_repeat 2 57 0 231 188 0 0 chr17 44785804 44785852 -44718701 + (CTGGGG)n Simple_repeat Simple_repeat 3 50 0 838 137 0 15 chr17 44786032 44786163 -44718390 + AluJo SINE Alu 1 129 -173 527 153 12 0 chr17 44786179 44786264 -44718289 + AluJo SINE Alu 195 280 -32 271 195 61 152 chr17 44786447 44786516 -44718037 + MIR SINE MIR 71 145 -117 1893 122 87 0 chr17 44786516 44786804 -44717749 - AluSp SINE Alu 0 313 1 271 195 61 152 chr17 44786804 44786898 -44717655 + MIR SINE MIR 145 219 -43 1158 294 85 26 chr17 44787859 44788363 -44716190 + L2 LINE L2 2167 2700 -614 1989 131 0 0 chr17 44788368 44788659 -44715894 + AluSp SINE Alu 5 295 -18 1786 149 31 3 chr17 44788676 44788965 -44715588 + AluSq SINE Alu 1 297 -16 558 132 0 94 chr17 44788965 44789071 -44715482 + AluJo SINE Alu 88 183 -129 805 173 0 0 chr17 44789071 44789204 -44715349 - AluJo/FLAM SINE Alu -179 133 1 2292 147 64 57 chr17 44789206 44789750 -44714803 - MER21A LTR ERV1 -374 557 10 360 305 130 6 chr17 44791198 44791375 -44713178 - MIR SINE MIR -29 233 35 269 135 19 0 chr17 44791496 44791548 -44713005 + (CTGGGG)n Simple_repeat Simple_repeat 6 58 0 213 178 0 0 chr17 44792013 44792058 -44712495 + (CTGGGG)n Simple_repeat Simple_repeat 6 50 0 594 136 5 6 chr17 44792259 44792502 -44712051 + AluJo SINE Alu 1 280 -32 306 223 68 95 chr17 44792687 44792740 -44711813 + MIR SINE MIR 76 129 -133 1988 103 72 0 chr17 44792740 44793031 -44711522 - AluSp SINE Alu -1 312 1 306 223 68 95 chr17 44793031 44793125 -44711428 + MIR SINE MIR 129 219 -43 1114 275 96 37 chr17 44794081 44794590 -44709963 + L2 LINE L2 2167 2705 -609 1884 137 17 3 chr17 44794596 44794888 -44709665 + AluSq SINE Alu 1 296 -17 2203 112 0 3 chr17 44794890 44795202 -44709351 + AluSq SINE Alu 1 311 -2 1186 193 0 5 chr17 44795219 44795432 -44709121 + AluJo SINE Alu 87 298 -14 2023 102 7 0 chr17 44795432 44795706 -44708847 + AluSx SINE Alu 1 276 -36 2210 109 7 0 chr17 44795706 44796008 -44708545 + AluSx SINE Alu 1 304 -8 355 203 0 0 chr17 44796162 44796231 -44708322 - MSTD LTR MaLR -246 150 82 1254 132 0 49 chr17 44796234 44796439 -44708114 - AluSx SINE Alu -117 195 1 318 176 37 111 chr17 44796439 44796469 -44708084 - MSTD LTR MaLR -328 100 69 1632 168 7 36 chr17 44796469 44796772 -44707781 + AluJo SINE Alu 2 295 -17 318 176 37 111 chr17 44796772 44796849 -44707704 - MSTD LTR MaLR -359 69 1 401 262 216 73 chr17 44796849 44797154 -44707399 + L2 LINE L2 2776 3155 -158 2275 91 10 3 chr17 44797154 44797462 -44707091 - AluSx SINE Alu -2 310 1 401 262 216 73 chr17 44797462 44797573 -44706980 + L2 LINE L2 3155 3249 -64 190 286 0 0 chr17 44797809 44797858 -44706695 + L2 LINE L2 3044 3092 -221 350 214 82 0 chr17 44797862 44797960 -44706593 - MER69 DNA AcHobo -11 2515 2410 2462 37 0 49 chr17 44798160 44798487 -44706066 - AluY SINE Alu 0 311 1 2081 81 7 0 chr17 44798488 44798760 -44705793 - AluSp SINE Alu -35 278 5 196 324 15 15 chr17 44798865 44798933 -44705620 + MIR SINE MIR 117 184 -78 194 373 36 9 chr17 44798998 44799108 -44705445 + MIR SINE MIR 33 145 -63 244 284 0 27 chr17 44800682 44800756 -44703797 + MER5A DNA MER1_type 87 158 -31 233 363 39 73 chr17 44803558 44803737 -44700816 + MIR SINE MIR 13 185 -77 246 364 0 0 chr17 44803753 44803841 -44700712 - L2 LINE L2 -40 3232 3145 2494 42 0 7 chr17 44805253 44805562 -44698991 + AluY SINE Alu 1 307 -4 255 186 169 0 chr17 44806914 44806973 -44697580 + L2 LINE L2 3201 3269 -3 22 0 0 0 chr17 44807710 44807732 -44696821 + AT_rich Low_complexity Low_complexity 1 22 0 2415 67 3 22 chr17 44807814 44808128 -44696425 - AluY SINE Alu -3 308 1 2188 101 38 0 chr17 44808312 44808600 -44695953 - AluSx SINE Alu -13 299 1 42 0 0 0 chr17 44809827 44809869 -44694684 + AT_rich Low_complexity Low_complexity 1 42 0 400 181 6 31 chr17 44811792 44811953 -44692600 + CT-rich Low_complexity Low_complexity 1 156 0 1974 124 0 0 chr17 44811954 44812221 -44692332 - AluSx SINE Alu -39 273 7 983 171 29 96 chr17 44812425 44812664 -44691889 + MER58A DNA MER1_type 1 223 -1 1498 98 10 5 chr17 44812977 44813182 -44691371 + AluSg/x SINE Alu 105 310 -2 409 137 11 11 chr17 44813182 44813277 -44691276 + (TA)n Simple_repeat Simple_repeat 2 96 0 243 0 0 0 chr17 44813277 44813304 -44691249 + (CA)n Simple_repeat Simple_repeat 2 28 0 2327 94 0 3 chr17 44813319 44813617 -44690936 + AluSc SINE Alu 5 301 -8 2057 147 3 10 chr17 44813628 44813928 -44690625 + AluSx SINE Alu 1 298 -14 1159 243 45 14 chr17 44814392 44814714 -44689839 - AluJb SINE Alu 0 332 2 231 188 0 0 chr17 44814904 44814952 -44689601 + (CTGGGG)n Simple_repeat Simple_repeat 3 50 0 830 137 0 15 chr17 44815132 44815263 -44689290 + AluJo SINE Alu 1 129 -173 538 123 12 0 chr17 44815283 44815364 -44689189 + AluJo SINE Alu 199 280 -32 319 180 66 150 chr17 44815544 44815616 -44688937 + MIR SINE MIR 67 119 -143 2008 115 87 0 chr17 44815616 44815904 -44688649 - AluSp SINE Alu 0 313 1 319 180 66 150 chr17 44815904 44815998 -44688555 + MIR SINE MIR 119 219 -43 1168 277 96 37 chr17 44816958 44817467 -44687086 + L2 LINE L2 2167 2705 -609 1973 137 17 3 chr17 44817473 44817765 -44686788 + AluSq SINE Alu 1 296 -17 2293 112 0 3 chr17 44817767 44818079 -44686474 + AluSq SINE Alu 1 311 -2 1223 190 0 5 chr17 44818096 44818307 -44686246 + AluJo SINE Alu 87 296 -16 2148 98 7 0 chr17 44818309 44818583 -44685970 + AluSx SINE Alu 1 276 -36 2300 109 7 0 chr17 44818583 44818885 -44685668 + AluSx SINE Alu 1 304 -8 2096 79 13 73 chr17 44819177 44819518 -44685035 + AluY SINE Alu 8 311 0 248 271 186 0 chr17 44819519 44819648 -44684905 - L2 LINE L2 -202 3070 2918 295 342 145 5 chr17 44819756 44819949 -44684604 - L2 LINE L2 -557 2757 2538 833 156 14 0 chr17 44819960 44820101 -44684452 + FLAM_C SINE Alu 1 143 0 213 284 105 84 chr17 44820136 44820375 -44684178 - L2 LINE L2 -840 2474 2231 1692 133 27 30 chr17 44821669 44821969 -44682584 + AluJo SINE Alu 1 299 -13 2447 58 10 0 chr17 44822404 44822698 -44681855 + AluY SINE Alu 1 297 -14 2284 113 3 6 chr17 44824199 44824510 -44680043 + AluSx SINE Alu 2 311 -1 1852 104 15 22 chr17 44824548 44824817 -44679736 + AluSq SINE Alu 26 292 -21 2361 111 0 0 chr17 44827252 44827550 -44677003 - AluSq SINE Alu -15 298 1 1943 133 13 32 chr17 44827976 44828284 -44676269 + AluJb SINE Alu 7 308 -4 1314 181 76 14 chr17 44831702 44831978 -44672575 - AluY SINE Alu -18 293 1 724 90 189 0 chr17 44831978 44832089 -44672464 - AluSg SINE Alu -177 133 2 2134 134 3 3 chr17 44832102 44832400 -44672153 - AluSx SINE Alu -14 298 1 773 200 0 15 chr17 44832429 44832564 -44671989 + FLAM_A SINE Alu 1 133 0 1895 163 3 3 chr17 44832882 44833176 -44671377 - AluJb SINE Alu -18 294 1 2171 119 0 10 chr17 44833361 44833654 -44670899 + AluSx SINE Alu 1 290 -22 955 188 0 24 chr17 44833664 44833829 -44670724 + FRAM SINE Alu 1 158 -18 1943 167 0 0 chr17 44833832 44834125 -44670428 + AluJb SINE Alu 1 293 -19 2226 99 0 10 chr17 44834128 44834443 -44670110 + AluSx SINE Alu 2 312 0 2202 98 7 16 chr17 44834781 44835086 -44669467 - AluSq SINE Alu -11 302 1 261 287 18 161 chr17 44835679 44835885 -44668668 + MIR SINE MIR 26 203 -5 261 299 68 43 chr17 44835976 44836093 -44668460 - MIR3 SINE MIR -25 183 64 1586 142 24 109 chr17 44836112 44836450 -44668103 + AluYb8 SINE Alu 1 309 -9 1387 205 42 7 chr17 44836461 44836768 -44667785 + L1M4 LINE L1 3567 3884 -2262 333 199 76 61 chr17 44836773 44836810 -44667743 + L1MC5 LINE L1 7561 7596 -365 2527 63 7 3 chr17 44836810 44837113 -44667440 + AluY SINE Alu 1 304 -7 333 199 76 61 chr17 44837113 44837206 -44667347 + L1MC5 LINE L1 7596 7693 -268 1593 174 14 14 chr17 44837351 44837644 -44666909 + AluJb SINE Alu 1 293 -19 2108 128 7 0 chr17 44837716 44838004 -44666549 + AluSx SINE Alu 1 290 -22 2265 71 3 30 chr17 44838004 44838301 -44666252 + AluY SINE Alu 1 289 -22 1201 83 7 0 chr17 44838463 44838607 -44665946 + AluSg/x SINE Alu 70 214 -98 184 239 162 148 chr17 44838710 44838815 -44665738 - MER5A DNA MER1_type 0 189 87 1622 154 26 51 chr17 44838815 44839126 -44665427 - AluJb SINE Alu -9 303 1 1874 149 7 7 chr17 44839130 44839425 -44665128 - AluJo SINE Alu -17 295 1 184 239 162 148 chr17 44839425 44839456 -44665097 - MER5A DNA MER1_type -104 85 46 1025 168 22 0 chr17 44839493 44839678 -44664875 - MER5A DNA MER1_type 0 189 1 577 216 54 27 chr17 44839764 44839949 -44664604 - MLT1J LTR MaLR -33 478 289 1971 138 24 10 chr17 44839984 44840281 -44664272 + AluJb SINE Alu 1 301 -11 437 163 11 0 chr17 44840281 44840373 -44664180 + GA-rich Low_complexity Low_complexity 2 94 0 241 217 121 24 chr17 44840421 44840504 -44664049 - MLT1L LTR MaLR -343 272 182 689 224 0 0 chr17 44840586 44840702 -44663851 + FLAM_A SINE Alu 1 116 -17 804 211 167 0 chr17 44840705 44840885 -44663668 - AluJo SINE Alu -17 295 86 218 240 20 0 chr17 44840980 44841030 -44663523 + MIR SINE MIR 93 143 -65 445 285 48 24 chr17 44841038 44841203 -44663350 - MER20B DNA MER1_type -18 201 32 1138 174 77 5 chr17 44841254 44841449 -44663104 - AluJo SINE Alu -18 294 86 2008 147 30 0 chr17 44841474 44841773 -44662780 - AluSx SINE Alu -4 308 1 193 321 0 0 chr17 44841784 44841840 -44662713 + L2 LINE L2 574 629 -2685 303 91 0 0 chr17 44841906 44841950 -44662603 + MADE1 DNA Mariner 1 44 -36 1956 137 33 3 chr17 44841950 44842249 -44662304 - AluSg SINE Alu -2 308 1 791 181 0 0 chr17 44842251 44842389 -44662164 - AluSg/x SINE Alu -1 309 172 831 221 72 50 chr17 44842521 44842783 -44661770 + AluJo SINE Alu 44 311 -1 2301 101 0 0 chr17 44842901 44843197 -44661356 - AluSx SINE Alu -16 296 1 299 221 31 117 chr17 44843738 44843901 -44660652 + L1 LINE L1 4181 4329 -1817 2296 92 3 0 chr17 44843901 44844193 -44660360 - AluY SINE Alu -18 293 1 31 82 0 0 chr17 44844202 44844275 -44660278 + AT_rich Low_complexity Low_complexity 1 73 0 983 202 22 36 chr17 44844277 44844451 -44660102 - AluJb SINE Alu -10 302 130 324 0 0 0 chr17 44844451 44844487 -44660066 + (TG)n Simple_repeat Simple_repeat 2 37 0 983 202 22 36 chr17 44844487 44844535 -44660018 - AluJb SINE Alu -182 130 83 1268 134 0 0 chr17 44844545 44844730 -44659823 - AluJb SINE Alu 0 304 120 648 173 18 0 chr17 44844773 44844883 -44659670 - AluJb SINE Alu -178 134 23 274 177 48 0 chr17 44844883 44844945 -44659608 - L1MB3 LINE L1 -42 6141 6077 21 0 0 0 chr17 44844965 44844986 -44659567 + AT_rich Low_complexity Low_complexity 1 21 0 1551 157 46 75 chr17 44844987 44845148 -44659405 - AluJo SINE Alu -11 301 152 2096 106 60 0 chr17 44845148 44845432 -44659121 - AluSx SINE Alu -11 301 1 1551 157 46 75 chr17 44845432 44845576 -44658977 - AluJo SINE Alu -160 152 5 604 195 9 0 chr17 44845636 44845749 -44658804 + FLAM_C SINE Alu 1 114 -19 189 132 0 0 chr17 44845883 44845921 -44658632 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 806 98 8 23 chr17 44845921 44846053 -44658500 - MER2 DNA MER2_type -135 210 81 1963 136 17 0 chr17 44846054 44846349 -44658204 - AluSx SINE Alu 0 312 13 377 233 67 0 chr17 44846368 44846458 -44658095 - MER2 DNA MER2_type -249 96 1 2331 104 7 0 chr17 44848133 44848431 -44656122 + AluSx SINE Alu 1 300 -12 947 171 18 18 chr17 44848436 44848606 -44655947 + AluJb SINE Alu 130 299 -13 256 154 0 0 chr17 44848676 44848715 -44655838 - MER81 DNA DNA -75 39 1 307 304 73 13 chr17 44848987 44849141 -44655412 - MIR SINE MIR -64 144 8 1192 123 0 0 chr17 44849193 44849356 -44655197 - AluSg/x SINE Alu -10 300 138 912 244 94 74 chr17 44849666 44849891 -44654662 + MLT1L LTR MaLR 135 354 -261 2648 172 49 31 chr17 44849891 44850402 -44654151 - MLT2B1 LTR ERVL 0 520 1 912 244 94 74 chr17 44850402 44850490 -44654063 + MLT1L LTR MaLR 354 439 -176 1984 151 3 35 chr17 44850490 44850807 -44653746 + AluJb SINE Alu 1 307 -5 912 244 94 74 chr17 44850807 44850950 -44653603 + MLT1L LTR MaLR 439 601 -14 1348 96 0 17 chr17 44851069 44851247 -44653306 + AluSq SINE Alu 137 311 -2 2223 119 3 0 chr17 44851247 44851542 -44653011 + AluSx SINE Alu 1 296 -16 585 194 48 13 chr17 44851559 44851753 -44652800 + LTR54 LTR ERV1 167 397 -113 2178 93 11 0 chr17 44852807 44853113 -44651440 + AluSp SINE Alu 1 309 0 285 170 0 0 chr17 44853118 44853171 -44651382 + L1PA16 LINE L1 6114 6166 0 2457 86 0 16 chr17 44853205 44853518 -44651035 + AluY SINE Alu 1 308 -3 2481 66 3 0 chr17 44853641 44853944 -44650609 + AluY SINE Alu 1 304 -7 213 292 83 31 chr17 44854370 44854466 -44650087 + L2 LINE L2 3168 3268 -4 2218 130 3 0 chr17 44854997 44855296 -44649257 + AluSx SINE Alu 1 300 -12 2100 143 0 3 chr17 44855338 44855646 -44648907 + AluSx SINE Alu 4 310 -2 1825 185 3 0 chr17 44855725 44856022 -44648531 + AluJo SINE Alu 1 298 -14 386 263 151 18 chr17 44856047 44856332 -44648221 + L1MC5 LINE L1 7605 7927 -34 796 199 48 24 chr17 44856445 44856611 -44647942 + AluJo SINE Alu 124 293 -19 2229 120 0 3 chr17 44856617 44856917 -44647636 + AluSx SINE Alu 1 299 -13 1736 67 5 0 chr17 44856923 44857132 -44647421 + AluY SINE Alu 10 219 -92 1561 154 26 51 chr17 44857334 44857645 -44646908 - AluJb SINE Alu -9 303 1 1215 173 5 9 chr17 44857649 44857863 -44646690 - AluJb SINE Alu -17 295 83 2083 135 3 3 chr17 44858058 44858361 -44646192 + AluSx SINE Alu 1 303 -9 434 249 28 28 chr17 44858362 44858539 -44646014 - L1MB7 LINE L1 -13 6171 5995 537 363 71 8 chr17 44858553 44858683 -44645870 - L1ME LINE L1 -516 5605 5485 1775 152 10 24 chr17 44858683 44858979 -44645574 + AluJb SINE Alu 1 292 -20 537 363 71 8 chr17 44858979 44859088 -44645465 - L1ME LINE L1 -636 5485 5351 2565 40 0 0 chr17 44859719 44860023 -44644530 + AluY SINE Alu 1 304 -7 22 0 0 0 chr17 44860169 44860191 -44644362 + AT_rich Low_complexity Low_complexity 1 22 0 1606 181 0 44 chr17 44860416 44860737 -44643816 + AluJo SINE Alu 6 312 0 2236 106 7 0 chr17 44861734 44862037 -44642516 + AluSx SINE Alu 1 305 -7 1923 74 0 16 chr17 44862394 44862652 -44641901 + AluY SINE Alu 56 309 -2 1850 126 14 10 chr17 44862743 44863037 -44641516 + AluSq SINE Alu 7 301 -12 1972 160 0 3 chr17 44863244 44863550 -44641003 + AluJb SINE Alu 1 305 -7 2289 98 0 3 chr17 44863550 44863856 -44640697 + AluSp SINE Alu 1 305 -8 353 187 40 0 chr17 44866789 44866864 -44637689 - MIR SINE MIR -32 230 153 601 253 50 50 chr17 44866864 44866985 -44637568 + MER46C DNA MER2_type 1 121 -217 2293 93 0 6 chr17 44866985 44867297 -44637256 - AluSg SINE Alu 0 310 1 601 253 50 50 chr17 44867297 44867472 -44637081 + MER46C DNA MER2_type 120 297 -41 1117 103 0 0 chr17 44867572 44867727 -44636826 + AluSg/x SINE Alu 137 291 -21 256 313 0 0 chr17 44867728 44867795 -44636758 - MIR SINE MIR -194 68 2 1444 172 111 14 chr17 44869030 44869309 -44635244 + AluJb SINE Alu 1 306 -6 1057 117 0 49 chr17 44871739 44871902 -44632651 - AluJb SINE Alu -12 300 146 236 157 0 59 chr17 44872038 44872089 -44632464 - MIR SINE MIR -62 200 153 1507 96 5 5 chr17 44872090 44872299 -44632254 - AluY SINE Alu -17 294 86 1842 132 4 4 chr17 44872399 44872679 -44631874 + AluSx SINE Alu 26 305 -7 984 150 6 42 chr17 44872679 44872846 -44631707 + AluJb SINE Alu 134 294 -18 364 241 38 0 chr17 44872907 44872986 -44631567 - MIR SINE MIR 0 262 181 2038 89 46 40 chr17 44873160 44873333 -44631220 - AluSp SINE Alu -7 306 129 2420 43 7 3 chr17 44873333 44873632 -44630921 - AluY SINE Alu -11 300 1 2038 89 46 40 chr17 44873632 44873762 -44630791 - AluSp SINE Alu -184 129 1 2211 96 3 0 chr17 44873981 44874273 -44630280 - AluSq SINE Alu -20 293 1 2144 96 7 3 chr17 44874275 44874568 -44629985 - AluSx SINE Alu -18 294 1 761 164 0 8 chr17 44874570 44874704 -44629849 - FLAM_A SINE Alu 0 133 1 341 311 35 23 chr17 44875321 44875561 -44628992 + L1 LINE L1 4895 5137 -1009 672 106 0 106 chr17 44875563 44875640 -44628913 + AluJo/FLAM SINE Alu 1 60 -242 1225 149 128 43 chr17 44875640 44875921 -44628632 - AluJo SINE Alu -5 307 3 672 106 0 106 chr17 44875921 44875975 -44628578 + AluJo/FLAM SINE Alu 60 118 -184 831 126 197 0 chr17 44875994 44876177 -44628376 + MER21A LTR ERV1 1 219 -712 * 2653 161 57 35 chr17 44876176 44876352 -44628201 + MER21A LTR ERV1 373 544 -387 1905 134 7 7 chr17 44876352 44876651 -44627902 - AluSx SINE Alu -13 299 1 2653 161 57 35 chr17 44876651 44877021 -44627532 + MER21A LTR ERV1 544 931 0 4108 156 45 3 chr17 44877021 44877772 -44626781 + MER21A-int LTR ERV1 1 783 -3408 2220 103 0 0 chr17 44877772 44878064 -44626489 + AluSx SINE Alu 1 292 -20 591 156 11 0 chr17 44878064 44878154 -44626399 + AluJo/F(R)AM SINE Alu 134 224 -88 2028 104 45 0 chr17 44878168 44878457 -44626096 + AluSg SINE Alu 1 302 -8 2031 81 70 7 chr17 44878457 44878742 -44625811 + AluSp SINE Alu 1 303 -10 1988 123 3 17 chr17 44878759 44879060 -44625493 + AluSx SINE Alu 1 297 -15 1153 151 38 30 chr17 44879060 44879456 -44625097 - LTR54 LTR ERV1 -38 472 2 3091 133 94 24 chr17 44879457 44880034 -44624519 + L1MB3 LINE L1 5522 6146 -37 1876 122 7 43 chr17 44880034 44880338 -44624215 + AluJo SINE Alu 1 293 -19 3091 133 94 24 chr17 44880338 44880378 -44624175 + L1MB3 LINE L1 6146 6182 -1 204 209 0 23 chr17 44880497 44880540 -44624013 + C-rich Low_complexity Low_complexity 1 42 0 2429 197 32 38 chr17 44882718 44883318 -44621235 + MER21B LTR ERV1 98 693 -170 231 161 32 32 chr17 44883318 44883380 -44621173 - Tigger5 DNA MER2_type 0 2323 2262 1800 176 3 0 chr17 44883381 44883677 -44620876 + AluJo SINE Alu 1 297 -15 2025 124 0 7 chr17 44883682 44883980 -44620573 + AluSx SINE Alu 1 296 -16 229 200 0 0 chr17 44884027 44884069 -44620484 - Tigger5 DNA MER2_type -2268 55 14 331 233 0 0 chr17 44884069 44884142 -44620411 - Tigger5 DNA MER2_type 0 2323 2251 262 200 0 0 chr17 44884111 44884166 -44620387 - Tigger5 DNA MER2_type -2268 55 1 * 483 233 17 8 chr17 44884166 44884285 -44620268 + MER21B LTR ERV1 692 811 -52 1851 157 7 16 chr17 44884886 44885022 -44619531 + AluSx SINE Alu 1 137 -175 2185 108 3 0 chr17 44885022 44885318 -44619235 + AluSx SINE Alu 1 297 -15 1851 157 7 16 chr17 44885318 44885486 -44619067 + AluSx SINE Alu 137 302 -10 1092 163 0 0 chr17 44885486 44885652 -44618901 + AluJb SINE Alu 134 299 -13 410 270 54 20 chr17 44885989 44886137 -44618416 + L2 LINE L2 3154 3306 -7 248 70 23 0 chr17 44886202 44886245 -44618308 + (TA)n Simple_repeat Simple_repeat 1 44 0 688 175 83 0 chr17 44886253 44886373 -44618180 - FLAM_C SINE Alu -12 131 2 2289 67 0 0 chr17 44886378 44886706 -44617847 - AluY SINE Alu 0 328 1 355 267 340 31 chr17 44889765 44889818 -44614735 + L2 LINE L2 2804 2839 -474 2455 57 0 0 chr17 44889818 44890116 -44614437 - AluY SINE Alu -13 298 1 355 267 340 31 chr17 44890116 44890171 -44614382 + L2 LINE L2 2839 2876 -437 2029 81 48 0 chr17 44890171 44890470 -44614083 - AluSc SINE Alu 0 309 1 355 267 340 31 chr17 44890470 44890742 -44613811 + L2 LINE L2 2876 3303 -10 31 26 0 0 chr17 44891457 44891495 -44613058 + GC_rich Low_complexity Low_complexity 1 38 0 213 239 11 34 chr17 44891539 44891627 -44612926 + (CGGGG)n Simple_repeat Simple_repeat 1 86 0 232 265 69 59 chr17 44893172 44893274 -44611279 + MER91A DNA MER1_type 74 176 -20 22 0 0 0 chr17 44893666 44893688 -44610865 + GC_rich Low_complexity Low_complexity 1 22 0 302 235 29 69 chr17 44894070 44894172 -44610381 + MIR SINE MIR 21 118 -90 722 243 20 7 chr17 44896022 44896174 -44608379 + MIR3 SINE MIR 3 156 -52 215 61 30 0 chr17 44896453 44896486 -44608067 + (CCCCCT)n Simple_repeat Simple_repeat 1 34 0 24 53 0 0 chr17 44896918 44896956 -44607597 + GC_rich Low_complexity Low_complexity 1 38 0 212 250 0 18 chr17 44898005 44898061 -44606492 + GA-rich Low_complexity Low_complexity 2 56 0 24 0 0 0 chr17 44898306 44898330 -44606223 + GC_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr17 44898386 44898426 -44606127 + GC_rich Low_complexity Low_complexity 1 40 0 1970 135 0 16 chr17 44898947 44899250 -44605303 - AluJo SINE Alu -14 298 1 37 23 0 0 chr17 44899467 44899511 -44605042 + GC_rich Low_complexity Low_complexity 1 44 0 242 132 19 0 chr17 44899696 44899749 -44604804 + (CGGGG)n Simple_repeat Simple_repeat 5 58 0 416 340 86 50 chr17 44899967 44900246 -44604307 - L3b LINE CR1 -101 1482 1194 417 236 42 116 chr17 44900281 44900497 -44604056 - L3 LINE CR1 -14 1563 1364 22 56 0 0 chr17 44900660 44900696 -44603857 + GC_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr17 44900966 44900997 -44603556 + GC_rich Low_complexity Low_complexity 1 31 0 380 293 0 53 chr17 44902165 44902298 -44602255 + MIR SINE MIR 59 184 -78 2270 64 4 0 chr17 44902362 44902676 -44601877 - AluSx SINE Alu 0 315 1 423 162 19 9 chr17 44903369 44903474 -44601079 + GA-rich Low_complexity Low_complexity 2 107 0 332 309 0 10 chr17 44903522 44903619 -44600934 + MIR SINE MIR 74 169 -93 245 152 20 19 chr17 44903921 44904033 -44600520 + GA-rich Low_complexity Low_complexity 1 112 0 251 293 0 38 chr17 44904442 44904548 -44600005 + (CTGGGG)n Simple_repeat Simple_repeat 1 102 0 214 361 0 22 chr17 44904493 44904673 -44599880 + (TTGGGG)n Simple_repeat Simple_repeat 5 180 0 * 331 300 11 22 chr17 44904624 44904804 -44599749 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 206 306 28 21 chr17 44904753 44904897 -44599656 + (TTGGGG)n Simple_repeat Simple_repeat 2 146 0 * 201 328 172 5 chr17 44905801 44906005 -44598548 - L2 LINE L2 -216 3056 2819 2321 76 3 7 chr17 44906005 44906309 -44598244 + AluSg SINE Alu 1 303 -7 375 262 82 12 chr17 44906920 44907046 -44597507 + MIR SINE MIR 5 140 -68 201 296 120 40 chr17 44907065 44907190 -44597363 - MIR SINE MIR -59 203 69 749 155 0 23 chr17 44907618 44907747 -44596806 + FLAM_C SINE Alu 1 126 -7 288 0 0 0 chr17 44907832 44907864 -44596689 + (T)n Simple_repeat Simple_repeat 1 32 0 186 330 75 21 chr17 44908011 44908105 -44596448 - MIR SINE MIR -57 151 53 387 0 0 0 chr17 44908756 44908799 -44595754 + (TG)n Simple_repeat Simple_repeat 1 43 0 240 35 0 0 chr17 44908801 44908830 -44595723 + (GA)n Simple_repeat Simple_repeat 2 30 0 192 40 0 0 chr17 44908885 44908910 -44595643 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 1015 136 0 0 chr17 44908911 44909051 -44595502 - AluSg/x SINE Alu -36 274 135 1870 99 128 7 chr17 44909051 44909324 -44595229 - AluSg SINE Alu -3 307 2 651 128 0 0 chr17 44909554 44909663 -44594890 + (TC)n Simple_repeat Simple_repeat 1 109 0 2390 116 3 0 chr17 44909663 44909974 -44594579 - AluSx SINE Alu 0 312 1 1956 158 6 3 chr17 44910405 44910716 -44593837 + AluSx SINE Alu 1 312 0 467 189 11 0 chr17 44910729 44910819 -44593734 + AluJb SINE Alu 123 213 -99 2133 78 0 0 chr17 44910820 44911077 -44593476 + AluY SINE Alu 1 257 -54 238 32 0 0 chr17 44911178 44911209 -44593344 - AluY SINE Alu -271 31 1 1769 184 0 16 chr17 44911242 44911551 -44593002 + AluJb SINE Alu 1 304 -8 2561 66 0 0 chr17 44911818 44912121 -44592432 + AluY SINE Alu 1 303 -8 2451 67 3 22 chr17 44912329 44912644 -44591909 - AluSc SINE Alu 0 309 1 695 114 23 68 chr17 44912644 44912776 -44591777 - AluSg SINE Alu -180 130 5 1106 121 24 18 chr17 44912782 44912948 -44591605 - AluSg/x SINE Alu -17 293 127 861 93 0 50 chr17 44913032 44913171 -44591382 - AluSg/x SINE Alu 0 310 179 599 173 8 30 chr17 44913173 44913306 -44591247 + AluJb SINE Alu 181 310 -2 391 150 17 0 chr17 44913465 44913525 -44591028 + AluSx SINE Alu 2 62 -239 1864 119 0 0 chr17 44913625 44913868 -44590685 + AluSx SINE Alu 57 299 -13 289 328 145 28 chr17 44914021 44914552 -44590001 + L2 LINE L2 1057 1649 -1665 611 209 78 114 chr17 44914613 44914666 -44589887 - Charlie4a DNA MER1_type -1453 508 455 1999 91 80 11 chr17 44914666 44914953 -44589600 - AluSx SINE Alu -3 309 3 611 209 78 114 chr17 44914953 44915145 -44589408 - Charlie4a DNA MER1_type -1506 455 274 1945 135 7 43 chr17 44915145 44915449 -44589104 - AluJo SINE Alu -18 294 2 611 209 78 114 chr17 44915449 44915509 -44589044 - Charlie4a DNA MER1_type -1687 274 213 2223 119 10 0 chr17 44915955 44916257 -44588296 - AluSx SINE Alu -7 305 1 2059 167 0 0 chr17 44916296 44916595 -44587958 - AluJb SINE Alu -13 299 1 282 141 0 18 chr17 44916731 44916795 -44587758 + MIR SINE MIR 74 137 -71 * 323 296 0 11 chr17 44916788 44916876 -44587677 - L2 LINE L2 0 3272 3186 2348 113 3 0 chr17 44917426 44917736 -44586817 - AluSq SINE Alu -2 311 1 803 178 0 0 chr17 44917773 44917891 -44586662 - AluJb SINE Alu -194 118 1 1670 162 33 39 chr17 44918125 44918458 -44586095 + MER21B LTR ERV1 363 693 -170 258 161 32 32 chr17 44918458 44918520 -44586033 - Tigger5 DNA MER2_type 0 2323 2262 1906 172 3 0 chr17 44918521 44918817 -44585736 + AluJo SINE Alu 1 297 -15 2225 122 0 0 chr17 44918822 44919118 -44585435 + AluSx SINE Alu 1 296 -16 250 200 0 0 chr17 44919165 44919207 -44585346 - Tigger5 DNA MER2_type -2268 55 14 361 233 0 0 chr17 44919207 44919280 -44585273 - Tigger5 DNA MER2_type 0 2323 2251 528 225 17 8 chr17 44919303 44919423 -44585130 + MER21B LTR ERV1 691 811 -52 1944 157 7 16 chr17 44920024 44920160 -44584393 + AluSx SINE Alu 1 137 -175 2290 108 3 0 chr17 44920160 44920456 -44584097 + AluSx SINE Alu 1 297 -15 1944 157 7 16 chr17 44920456 44920625 -44583928 + AluSx SINE Alu 137 303 -9 1140 163 0 0 chr17 44920625 44920791 -44583762 + AluJb SINE Alu 134 299 -13 288 0 0 0 chr17 44921132 44921164 -44583389 + (T)n Simple_repeat Simple_repeat 1 32 0 255 366 67 0 chr17 44921276 44921410 -44583143 - MIR SINE MIR -74 188 46 347 316 17 8 chr17 44921918 44922035 -44582518 - MIR3 SINE MIR -49 159 42 2262 113 3 0 chr17 44924409 44924710 -44579843 - AluSx SINE Alu -10 302 1 1255 79 0 67 chr17 44925035 44925213 -44579340 + AluSg/x SINE Alu 136 301 -11 302 331 77 24 chr17 44926768 44926937 -44577616 + MIR3 SINE MIR 25 202 -6 2559 58 0 10 chr17 44927620 44927929 -44576624 - AluY SINE Alu -5 306 1 1615 129 7 61 chr17 44928446 44928537 -44576016 + AluJo SINE Alu 37 131 -181 2312 103 14 0 chr17 44928537 44928829 -44575724 - AluSg SINE Alu -14 296 1 2378 105 0 0 chr17 44928836 44929141 -44575412 - AluSq SINE Alu -7 306 2 1615 129 7 61 chr17 44929141 44929320 -44575233 + AluJo SINE Alu 137 300 -12 1924 128 0 11 chr17 44929652 44929918 -44574635 - AluSx SINE Alu -49 263 1 476 222 60 0 chr17 44929921 44930038 -44574515 + MIR3 SINE MIR 82 205 -3 190 289 0 0 chr17 44930940 44930985 -44573568 - MIR SINE MIR -56 206 162 2412 89 3 0 chr17 44930995 44931288 -44573265 - AluSp SINE Alu -15 298 5 992 94 0 8 chr17 44931465 44931593 -44572960 + AluSg/x SINE Alu 165 291 -19 868 168 0 0 chr17 44931667 44931792 -44572761 + FLAM_C SINE Alu 1 125 -18 47 0 0 0 chr17 44931792 44931839 -44572714 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr17 44932022 44932042 -44572511 + (CCCCCT)n Simple_repeat Simple_repeat 3 22 0 23 0 0 0 chr17 44932981 44933004 -44571549 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr17 44933219 44933255 -44571298 + (TG)n Simple_repeat Simple_repeat 1 36 0 321 26 0 0 chr17 44933304 44933342 -44571211 + (TG)n Simple_repeat Simple_repeat 2 39 0 330 87 0 0 chr17 44933581 44933627 -44570926 + (CCCCAG)n Simple_repeat Simple_repeat 5 50 0 23 33 0 0 chr17 44934542 44934572 -44569981 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr17 44934586 44934613 -44569940 + (CTGTG)n Simple_repeat Simple_repeat 5 31 0 2195 112 0 11 chr17 44937940 44938251 -44566302 - AluSx SINE Alu 0 308 1 2323 93 0 29 chr17 44939030 44939341 -44565212 + AluSx SINE Alu 1 302 -10 2294 108 7 0 chr17 44940296 44940591 -44563962 - AluSg SINE Alu -13 297 1 1660 163 13 35 chr17 44941176 44941489 -44563064 + AluJb SINE Alu 1 306 -6 2016 136 10 7 chr17 44942038 44942333 -44562220 - AluSx SINE Alu -16 296 1 878 113 73 0 chr17 44942333 44942457 -44562096 - AluSq/x SINE Alu -176 136 4 2516 81 0 0 chr17 44943147 44943443 -44561110 + AluSx SINE Alu 1 296 -16 180 0 0 0 chr17 44945076 44945096 -44559457 + (CAGGA)n Simple_repeat Simple_repeat 1 20 0 1549 198 30 0 chr17 44945394 44945697 -44558856 - AluJo SINE Alu 0 312 1 1809 103 0 36 chr17 44945881 44945966 -44558587 + AluSx SINE Alu 54 140 -172 2457 86 3 0 chr17 44945966 44946268 -44558285 + AluSx SINE Alu 1 303 -9 1809 103 0 36 chr17 44946268 44946435 -44558118 + AluSx SINE Alu 140 297 -15 961 183 0 6 chr17 44946435 44946604 -44557949 + FRAM SINE Alu 1 165 -11 249 57 0 0 chr17 44946664 44946699 -44557854 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1077 104 0 0 chr17 44947395 44947530 -44557023 + AluJo SINE Alu 1 135 -177 2478 81 3 0 chr17 44947530 44947838 -44556715 + AluSq SINE Alu 1 309 -4 1055 151 42 0 chr17 44948372 44948538 -44556015 - FRAM SINE Alu -7 169 1 323 303 30 23 chr17 44948653 44948785 -44555768 - MIR3 SINE MIR -70 138 6 394 300 5 43 chr17 44948833 44949043 -44555510 + MARNA DNA Mariner 162 363 -223 353 240 43 94 chr17 44949638 44949985 -44554568 + L1MCa LINE L1 1906 2215 -4211 252 81 81 0 chr17 44949985 44950059 -44554494 + (TA)n Simple_repeat Simple_repeat 1 80 0 1544 151 107 0 chr17 44950059 44950311 -44554242 - AluJb SINE Alu -23 289 11 502 241 166 76 chr17 44950337 44950542 -44554011 + L1MC4 LINE L1 7311 7496 -546 2252 104 10 3 chr17 44950542 44950840 -44553713 + AluSp SINE Alu 1 300 -13 502 241 166 76 chr17 44950840 44950886 -44553667 + L1MC4 LINE L1 7496 7536 -506 192 40 0 0 chr17 44950886 44950911 -44553642 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 502 241 166 76 chr17 44950911 44951179 -44553374 + L1MC4 LINE L1 7536 7978 -64 2019 135 0 32 chr17 44953399 44953711 -44550842 + AluSx SINE Alu 11 312 0 304 310 60 60 chr17 44953821 44954005 -44550548 + L1ME4a LINE L1 5769 5952 -169 2178 84 34 0 chr17 44954592 44954889 -44549664 - AluSp SINE Alu -6 307 1 216 97 0 0 chr17 44955619 44955650 -44548903 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1863 173 0 22 chr17 44955666 44955808 -44548745 + AluJo SINE Alu 1 145 -167 2447 67 10 3 chr17 44955808 44956108 -44548445 + AluY SINE Alu 1 302 -9 1863 173 0 22 chr17 44956108 44956277 -44548276 + AluJo SINE Alu 145 305 -7 2402 112 0 0 chr17 44956280 44956585 -44547968 + AluSq SINE Alu 1 305 -8 2410 72 3 3 chr17 44957033 44957325 -44547228 + AluSc SINE Alu 1 292 -17 1993 123 50 13 chr17 44958441 44958742 -44545811 + AluSx SINE Alu 1 312 0 23 0 0 0 chr17 44958773 44958796 -44545757 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 44958804 44958825 -44545728 + AT_rich Low_complexity Low_complexity 1 21 0 2432 91 0 0 chr17 44958825 44959123 -44545430 + AluSc SINE Alu 1 298 -11 938 135 0 0 chr17 44959273 44959406 -44545147 - FLAM_C SINE Alu 0 133 1 2374 104 0 0 chr17 44959705 44960004 -44544549 - AluSx SINE Alu -13 299 1 1050 119 83 67 chr17 44960015 44960208 -44544345 - AluJo SINE Alu 0 312 117 516 198 0 0 chr17 44960229 44960320 -44544233 + FRAM SINE Alu 69 159 -17 2242 110 0 7 chr17 44960344 44960643 -44543910 - AluSq SINE Alu -16 297 1 2118 157 0 0 chr17 44960667 44960979 -44543574 - AluSx SINE Alu 0 312 1 1390 199 50 17 chr17 44961070 44961367 -44543186 - AluJo SINE Alu 0 312 6 28 22 0 22 chr17 44961619 44961650 -44542903 + AT_rich Low_complexity Low_complexity 1 32 -13 2190 122 0 10 chr17 44961650 44961946 -44542607 - AluSx SINE Alu -19 293 1 28 22 0 22 chr17 44961946 44961960 -44542593 + AT_rich Low_complexity Low_complexity 32 45 0 2525 61 0 3 chr17 44962083 44962380 -44542173 + AluY SINE Alu 1 296 -15 1824 167 0 0 chr17 44962756 44963067 -44541486 + AluJb SINE Alu 9 319 0 2228 113 0 32 chr17 44963072 44963381 -44541172 + AluSx SINE Alu 3 301 -11 2360 108 0 0 chr17 44963383 44963689 -44540864 + AluSg SINE Alu 3 308 -2 1032 137 0 71 chr17 44964145 44964158 -44540395 + AluSg/x SINE Alu 120 132 -178 216 0 0 0 chr17 44964158 44964182 -44540371 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 1032 137 0 71 chr17 44964182 44964265 -44540288 + AluSg/x SINE Alu 132 198 -112 2398 83 3 0 chr17 44964265 44964566 -44539987 + AluY SINE Alu 1 302 -9 1032 137 0 71 chr17 44964566 44964665 -44539888 + AluSg/x SINE Alu 198 302 -8 649 110 0 0 chr17 44964667 44964758 -44539795 + AluSg/x SINE Alu 208 298 -14 2413 100 0 0 chr17 44965195 44965496 -44539057 - AluSx SINE Alu -11 301 1 2139 137 3 13 chr17 44966189 44966495 -44538058 + AluJb SINE Alu 1 303 -9 263 315 90 0 chr17 44966756 44966845 -44537708 - L2 LINE L2 -1 3271 3175 1301 147 11 0 chr17 44966861 44967051 -44537502 - AluJb SINE Alu -120 192 1 286 321 69 8 chr17 44967330 44967461 -44537092 + L2 LINE L2 2139 2277 -1037 713 189 33 50 chr17 44967524 44967660 -44536893 + MER5B DNA MER1_type 1 135 -43 2351 74 3 17 chr17 44967660 44967956 -44536597 + AluSp SINE Alu 1 292 -21 713 189 33 50 chr17 44967956 44967999 -44536554 + MER5B DNA MER1_type 135 177 -1 251 330 90 47 chr17 44968114 44968347 -44536206 + MIR SINE MIR 20 262 0 2330 168 70 71 chr17 44968374 44968747 -44535806 - L1MC4a LINE L1 0 7808 7436 2050 118 20 0 chr17 44968747 44969043 -44535510 + AluSq SINE Alu 1 302 -11 2330 168 70 71 chr17 44969043 44969151 -44535402 - L1MC4a LINE L1 -372 7436 7329 816 164 0 16 chr17 44969151 44969279 -44535274 + FLAM_C SINE Alu 2 127 -6 2077 112 0 59 chr17 44969283 44969605 -44534948 + AluSx SINE Alu 1 303 -9 2330 168 70 71 chr17 44969605 44969736 -44534817 - L1MC4a LINE L1 -482 7326 7191 22 70 0 0 chr17 44970135 44970178 -44534375 + GC_rich Low_complexity Low_complexity 1 43 0 544 188 215 0 chr17 44970689 44970833 -44533720 + MER96 DNA MER1_type? 1 175 0 1763 163 20 10 chr17 44971463 44971758 -44532795 + AluJo SINE Alu 1 298 -14 2067 130 10 3 chr17 44971758 44972056 -44532497 + AluSx SINE Alu 1 301 -11 2099 125 7 0 chr17 44972059 44972356 -44532197 + AluSx SINE Alu 1 299 -13 298 207 43 165 chr17 44972440 44972604 -44531949 + L2 LINE L2 3166 3309 -4 1935 149 7 10 chr17 44972785 44973086 -44531467 + AluSq SINE Alu 1 300 -13 2007 148 0 7 chr17 44973239 44973537 -44531016 + AluJb SINE Alu 3 298 -14 1643 124 60 23 chr17 44973729 44973995 -44530558 + AluSx SINE Alu 12 287 -25 1383 184 54 40 chr17 44974580 44974692 -44529861 + AluJo SINE Alu 3 112 -201 2380 72 10 0 chr17 44974692 44974983 -44529570 + AluSc SINE Alu 1 294 -15 1383 184 54 40 chr17 44974983 44975177 -44529376 + AluJo SINE Alu 112 313 0 1619 97 14 0 chr17 44975231 44975438 -44529115 + AluY SINE Alu 85 294 -17 378 96 0 0 chr17 44975489 44975541 -44529012 - AluSp/q SINE Alu -10 293 242 2841 7 0 0 chr17 44975641 44975941 -44528612 - AluY SINE Alu -11 300 1 1875 136 27 30 chr17 44976269 44976564 -44527989 - AluSx SINE Alu -18 294 1 1845 102 66 36 chr17 44976771 44977072 -44527481 + AluSq SINE Alu 1 309 0 717 173 8 15 chr17 44977162 44977295 -44527258 + AluJb SINE Alu 181 312 0 654 212 0 9 chr17 44977331 44977444 -44527109 + FLAM_C SINE Alu 7 118 -25 1704 168 3 41 chr17 44977496 44977632 -44526921 + AluJo SINE Alu 1 123 -189 2281 57 7 4 chr17 44977632 44977942 -44526611 + AluY SINE Alu 1 311 0 1704 168 3 41 chr17 44977942 44978095 -44526458 + AluJo SINE Alu 123 280 -32 1410 164 105 42 chr17 44978097 44978201 -44526352 + AluSg SINE Alu 7 103 -207 2429 84 3 0 chr17 44978201 44978500 -44526053 + AluSp SINE Alu 1 300 -13 2491 56 0 13 chr17 44978503 44978805 -44525748 + AluY SINE Alu 3 300 -11 1410 164 105 42 chr17 44978805 44978982 -44525571 + AluSg SINE Alu 104 310 0 207 218 0 0 chr17 44978983 44979038 -44525515 + GA-rich Low_complexity Low_complexity 2 56 0 1146 142 6 0 chr17 44979102 44979271 -44525282 + AluSx SINE Alu 1 170 -142 2257 205 35 33 chr17 44979605 44979665 -44524888 + L1ME1 LINE L1 5267 5325 -841 2234 114 10 0 chr17 44979665 44979962 -44524591 + AluSg SINE Alu 1 300 -10 2257 205 35 33 chr17 44979962 44980500 -44524053 + L1ME1 LINE L1 5325 5866 -300 1893 111 7 62 chr17 44980512 44980800 -44523753 + AluSx SINE Alu 1 272 -40 298 259 95 52 chr17 44980908 44981024 -44523529 - L2 LINE L2 -27 3286 3166 2099 125 7 0 chr17 44981108 44981405 -44523148 - AluSx SINE Alu -13 299 1 2067 130 10 3 chr17 44981408 44981707 -44522846 - AluSx SINE Alu -11 301 1 1763 163 20 10 chr17 44981707 44982001 -44522552 - AluJo SINE Alu -14 298 1 544 188 215 0 chr17 44982631 44982775 -44521778 - MER96 DNA MER1_type? 0 175 1 22 70 0 0 chr17 44983286 44983329 -44521224 + GC_rich Low_complexity Low_complexity 1 43 0 2330 168 70 71 chr17 44983728 44983859 -44520694 + L1MC4a LINE L1 7191 7321 -487 2077 112 0 59 chr17 44983859 44984181 -44520372 - AluSx SINE Alu -9 303 1 816 164 0 16 chr17 44984185 44984313 -44520240 - FLAM_C SINE Alu -6 127 2 2330 168 70 71 chr17 44984313 44984421 -44520132 + L1MC4a LINE L1 7324 7431 -377 2050 118 20 0 chr17 44984421 44984717 -44519836 - AluSq SINE Alu -11 302 1 2330 168 70 71 chr17 44984717 44985090 -44519463 + L1MC4a LINE L1 7431 7808 0 251 330 90 47 chr17 44985117 44985350 -44519203 - MIR SINE MIR 0 262 20 713 189 33 50 chr17 44985465 44985508 -44519045 - MER5B DNA MER1_type -1 177 135 2351 74 3 17 chr17 44985508 44985804 -44518749 - AluSp SINE Alu -21 292 1 713 189 33 50 chr17 44985804 44985940 -44518613 - MER5B DNA MER1_type -43 135 1 286 321 69 8 chr17 44986003 44986134 -44518419 - L2 LINE L2 -1037 2277 2139 1832 195 0 6 chr17 44986413 44986726 -44517827 + AluJb SINE Alu 1 311 -1 212 219 47 31 chr17 44988599 44988663 -44515890 - MIR SINE MIR -16 246 182 1368 101 0 0 chr17 44988670 44988848 -44515705 - AluY SINE Alu -14 297 120 434 193 193 18 chr17 44988961 44989075 -44515478 + L2 LINE L2 3178 3311 -2 520 302 90 36 chr17 44989159 44989381 -44515172 - MIR SINE MIR -20 242 9 530 123 0 0 chr17 44989883 44989956 -44514597 + AluSg/x SINE Alu 198 270 -42 22 0 0 0 chr17 44989968 44989990 -44514563 + AT_rich Low_complexity Low_complexity 1 22 0 1331 218 95 3 chr17 44990676 44990960 -44513593 + AluJo SINE Alu 1 310 -2 297 287 10 47 chr17 44991008 44991161 -44513392 - MIR SINE MIR -65 143 1 1064 91 168 96 chr17 44991163 44991360 -44513193 - AluJb SINE Alu -15 297 87 248 288 0 27 chr17 44992020 44992093 -44512460 + MIR SINE MIR 36 106 -102 218 344 107 8 chr17 44992169 44992302 -44512251 - MIR SINE MIR -57 151 5 2328 90 7 0 chr17 44993550 44993839 -44510714 - AluSp SINE Alu -22 291 1 2300 90 7 7 chr17 44993839 44994149 -44510404 - AluSx SINE Alu -2 310 1 2190 108 0 13 chr17 44994207 44994512 -44510041 - AluY SINE Alu -10 301 1 1922 162 10 7 chr17 44994514 44994810 -44509743 - AluJb SINE Alu -15 297 1 2341 115 0 6 chr17 44994864 44995178 -44509375 - AluSx SINE Alu 0 312 1 234 276 87 24 chr17 44995535 44995662 -44508891 - L2 LINE L2 -652 2662 2528 640 201 146 7 chr17 44995794 44995938 -44508615 - FRAM SINE Alu -2 164 1 1266 150 0 41 chr17 44995964 44996123 -44508430 - AluSg/x SINE Alu -17 293 144 2078 88 35 18 chr17 44996123 44996407 -44508146 - AluSc SINE Alu -15 294 6 1266 150 0 41 chr17 44996407 44996467 -44508086 - AluSg/x SINE Alu -166 144 83 668 137 0 0 chr17 44996467 44996562 -44507991 - AluSg/x SINE Alu -62 250 156 33 68 0 0 chr17 44996671 44996715 -44507838 + GC_rich Low_complexity Low_complexity 1 44 0 1723 140 4 36 chr17 44999095 44999272 -44505281 - AluJb SINE Alu 0 311 146 2403 95 3 0 chr17 44999272 44999576 -44504977 - AluY SINE Alu -6 305 1 1723 140 4 36 chr17 44999576 44999705 -44504848 - AluJb SINE Alu -165 146 14 2007 134 7 7 chr17 45000205 45000495 -44504058 + AluSx SINE Alu 1 290 -22 1945 121 0 60 chr17 45000657 45000979 -44503574 + AluSg SINE Alu 2 305 0 219 327 45 9 chr17 45001257 45001367 -44503186 - L2 LINE L2 -652 2662 2549 1148 214 0 18 chr17 45001404 45001628 -44502925 + AluJo SINE Alu 1 220 -92 277 173 0 0 chr17 45001786 45001838 -44502715 + Alu SINE Alu 250 301 -1 228 273 0 0 chr17 45001842 45001886 -44502667 + G-rich Low_complexity Low_complexity 5 48 0 2220 126 3 0 chr17 45002020 45002329 -44502224 - AluSx SINE Alu -2 310 1 2439 60 3 0 chr17 45002339 45002655 -44501898 - AluSq SINE Alu 0 317 1 2210 114 3 0 chr17 45003383 45003682 -44500871 + AluSq SINE Alu 1 300 -13 537 219 124 78 chr17 45003753 45003995 -44500558 - MIR SINE MIR 0 262 10 182 182 0 121 chr17 45004151 45004217 -44500336 - MER5B DNA MER1_type -6 172 115 229 273 62 29 chr17 45004488 45004633 -44499920 - MIR SINE MIR -14 248 100 1849 152 31 10 chr17 45004634 45004923 -44499630 + AluJo SINE Alu 1 295 -17 1203 86 7 0 chr17 45004925 45005077 -44499476 + AluSx SINE Alu 1 153 -159 1970 66 58 0 chr17 45005079 45005322 -44499231 + AluSx SINE Alu 46 302 -10 284 253 297 0 chr17 45006851 45006942 -44497611 + MIR SINE MIR 124 241 -21 726 254 78 53 chr17 45006963 45007052 -44497501 + MIR SINE MIR 12 97 -165 2172 123 10 3 chr17 45007052 45007345 -44497208 + AluSx SINE Alu 1 295 -17 726 254 78 53 chr17 45007345 45007499 -44497054 + MIR SINE MIR 97 261 -1 474 264 45 45 chr17 45007611 45007789 -44496764 + MIR SINE MIR 23 200 -62 661 260 0 7 chr17 45008335 45008489 -44496064 + MIR SINE MIR 2 154 -108 1215 99 0 6 chr17 45008499 45008661 -44495892 + AluY SINE Alu 1 161 -150 1691 99 0 0 chr17 45008821 45009032 -44495521 + AluSg/x SINE Alu 85 295 -15 347 0 23 0 chr17 45009032 45009075 -44495478 + (TA)n Simple_repeat Simple_repeat 2 45 0 279 0 0 0 chr17 45009074 45009105 -44495448 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 403 347 136 30 chr17 45009113 45009641 -44494912 - L2 LINE L2 -957 2357 1774 491 123 25 0 chr17 45009648 45009720 -44494833 + FLAM_A SINE Alu 42 118 -193 221 0 35 0 chr17 45009720 45009749 -44494804 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1852 149 16 23 chr17 45011352 45011660 -44492893 - AluJb SINE Alu -6 306 1 2450 92 7 0 chr17 45012047 45012352 -44492201 + AluSx SINE Alu 1 307 -5 487 350 56 42 chr17 45012708 45013211 -44491342 - L2 LINE L2 -2 3270 2764 2217 109 3 0 chr17 45013479 45013763 -44490790 + AluSx SINE Alu 13 297 -15 26 30 0 0 chr17 45014540 45014573 -44489980 + AT_rich Low_complexity Low_complexity 1 33 0 2487 70 0 0 chr17 45014660 45014961 -44489592 + AluY SINE Alu 6 306 -5 1897 148 6 49 chr17 45015649 45015788 -44488765 + AluJo SINE Alu 1 144 -168 2025 158 0 6 chr17 45015788 45016099 -44488454 + AluJb SINE Alu 1 309 -3 1897 148 6 49 chr17 45016099 45016283 -44488270 + AluJo SINE Alu 144 310 -2 1844 151 0 33 chr17 45016287 45016592 -44487961 + AluJo SINE Alu 1 295 -17 2457 88 3 16 chr17 45019581 45019898 -44484655 + AluSp SINE Alu 1 313 0 2268 102 0 26 chr17 45019911 45020224 -44484329 + AluY SINE Alu 2 306 -5 2290 78 4 0 chr17 45020435 45020716 -44483837 + AluSx SINE Alu 25 306 -6 242 322 103 26 chr17 45020801 45021034 -44483519 - L2 LINE L2 -1894 1420 1170 554 135 117 9 chr17 45021370 45021481 -44483072 + AluJo SINE Alu 20 142 -170 1508 158 69 43 chr17 45021483 45021786 -44482767 + AluJb SINE Alu 2 312 0 456 148 0 0 chr17 45023100 45023181 -44481372 - AluJ/FRAM SINE Alu 0 312 232 1493 136 3 105 chr17 45023785 45024071 -44480482 - AluJo SINE Alu -21 291 35 216 0 0 0 chr17 45025092 45025116 -44479437 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2190 103 0 4 chr17 45025119 45025400 -44479153 - AluSg SINE Alu -30 280 1 682 94 28 0 chr17 45025402 45025508 -44479045 - AluSc SINE Alu -11 298 190 2053 153 0 0 chr17 45025675 45025969 -44478584 + AluJo SINE Alu 1 294 -18 2399 106 3 0 chr17 45025971 45026282 -44478271 + AluSx SINE Alu 1 312 0 2159 120 7 3 chr17 45026923 45027223 -44477330 - AluSx SINE Alu -11 301 1 222 234 31 0 chr17 45029269 45029333 -44475220 + G-rich Low_complexity Low_complexity 2 67 0 323 316 129 41 chr17 45031362 45031779 -44472774 + L2 LINE L2 2325 2778 -536 348 341 22 22 chr17 45031833 45032059 -44472494 + L2 LINE L2 2870 3095 -177 225 269 108 62 chr17 45033176 45033306 -44471247 - MIR SINE MIR -70 192 57 21 0 0 0 chr17 45033580 45033601 -44470952 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 45033750 45033771 -44470782 + GC_rich Low_complexity Low_complexity 1 21 0 203 216 20 20 chr17 45034117 45034168 -44470385 + CT-rich Low_complexity Low_complexity 1 51 0 419 204 133 0 chr17 45034308 45034406 -44470147 + L2 LINE L2 3182 3292 -21 * 423 335 83 17 chr17 45034399 45034629 -44469924 - MIR SINE MIR -15 247 3 2207 108 0 14 chr17 45034758 45035054 -44469499 - AluSx SINE Alu -20 292 1 776 194 123 4 chr17 45035206 45035390 -44469163 - MER20 DNA MER1_type -1 218 1 236 233 138 52 chr17 45035425 45035541 -44469012 + MIR SINE MIR 131 256 -6 2289 73 0 28 chr17 45037736 45038060 -44466493 + AluSx SINE Alu 1 316 0 1976 164 7 3 chr17 45038073 45038383 -44466170 + AluJo SINE Alu 1 311 -1 226 245 0 0 chr17 45038589 45038642 -44465911 + L2 LINE L2 3257 3309 -4 2526 77 3 3 chr17 45039707 45040017 -44464536 + AluSp SINE Alu 2 311 -2 2079 116 34 3 chr17 45040026 45040320 -44464233 + AluSx SINE Alu 1 303 -9 394 316 121 5 chr17 45040430 45040620 -44463933 + MIR SINE MIR 45 256 -6 916 150 19 28 chr17 45040724 45040937 -44463616 - L1MB2 LINE L1 -7 6164 5954 458 265 34 27 chr17 45040979 45041126 -44463427 + L2 LINE L2 3163 3310 -3 318 312 102 13 chr17 45041297 45041454 -44463099 + MIR SINE MIR 84 254 -8 2217 102 31 0 chr17 45041566 45041859 -44462694 - AluSx SINE Alu -10 302 1 2590 44 0 7 chr17 45042206 45042503 -44462050 - AluY SINE Alu -16 295 1 883 186 0 87 chr17 45042598 45042829 -44461724 - L1MC4 LINE L1 -3 8039 7829 263 225 191 11 chr17 45047669 45047758 -44456795 - L2 LINE L2 -1 3271 3167 2423 112 0 0 chr17 45047819 45048132 -44456421 + AluSq SINE Alu 1 313 0 2521 60 3 22 chr17 45048133 45048450 -44456103 + AluY SINE Alu 1 311 0 1441 113 28 0 chr17 45049254 45049466 -44455087 + AluSg SINE Alu 1 218 -92 907 116 24 24 chr17 45049566 45049622 -44454931 + Tigger4(Zombi) DNA MER2_type 2535 2590 -141 2357 97 0 3 chr17 45049622 45049922 -44454631 + AluSx SINE Alu 1 299 -13 907 116 24 24 chr17 45049922 45050029 -44454524 + Tigger4(Zombi) DNA MER2_type 2589 2698 -33 689 317 102 35 chr17 45051200 45051995 -44452558 + L2 LINE L2 2423 3271 -1 2216 117 10 3 chr17 45052739 45053037 -44451516 + AluSx SINE Alu 1 300 -12 2340 113 3 0 chr17 45053058 45053368 -44451185 + AluSx SINE Alu 1 311 -1 2131 157 0 0 chr17 45053382 45053687 -44450866 + AluJb SINE Alu 1 305 -7 1508 176 23 47 chr17 45053917 45054218 -44450335 - AluJo SINE Alu -18 294 1 454 285 68 51 chr17 45056425 45056660 -44447893 + LTR16C LTR ERVL 71 309 -182 386 290 30 15 chr17 45056720 45056851 -44447702 + MER94 DNA DNA 2 134 0 606 221 92 33 chr17 45057373 45057418 -44447135 + L1MC5 LINE L1 7632 7673 -288 214 39 0 0 chr17 45057418 45057444 -44447109 + (TTA)n Simple_repeat Simple_repeat 1 180 0 2109 101 18 4 chr17 45057444 45057723 -44446830 - AluSc SINE Alu -1 308 1 606 221 92 33 chr17 45057723 45057915 -44446638 + L1MC5 LINE L1 7672 7885 -76 283 271 133 26 chr17 45057955 45058106 -44446447 + L1ME2 LINE L1 5997 6163 -1 281 263 66 46 chr17 45058117 45058269 -44446284 + L1MC5 LINE L1 7771 7925 -36 2416 72 7 0 chr17 45058299 45058591 -44445962 + AluSc SINE Alu 6 299 -10 567 301 83 18 chr17 45058628 45058857 -44445696 - MIR SINE MIR 0 262 19 791 125 15 37 chr17 45058933 45059069 -44445484 - FLAM_C SINE Alu 0 133 1 1696 134 86 4 chr17 45059080 45059349 -44445204 - AluJo SINE Alu -20 292 2 775 223 52 16 chr17 45059367 45059560 -44444993 + MIR SINE MIR 63 262 0 2454 62 3 0 chr17 45059635 45059923 -44444630 - AluSx SINE Alu -23 289 1 273 276 53 0 chr17 45059956 45060032 -44444521 - MIR SINE MIR -62 146 67 2294 80 0 35 chr17 45060860 45061174 -44443379 + AluSx SINE Alu 4 306 -6 2233 85 11 4 chr17 45061174 45061455 -44443098 + AluSg SINE Alu 1 283 -27 582 249 139 9 chr17 45061494 45061776 -44442777 - L2 LINE L2 -277 3036 2727 533 175 7 42 chr17 45061787 45061930 -44442623 - L1MB8 LINE L1 -1 6177 6040 386 204 15 7 chr17 45061932 45062018 -44442535 - AluJ/FLAM SINE Alu -238 64 1 997 195 5 25 chr17 45062086 45062286 -44442267 - AluJb SINE Alu -15 297 102 354 109 0 0 chr17 45062286 45062341 -44442212 + Alu SINE Alu 242 296 -5 296 327 64 40 chr17 45062536 45062833 -44441720 - L1ME LINE L1 -466 5655 5352 202 157 20 20 chr17 45063052 45063103 -44441450 + CT-rich Low_complexity Low_complexity 2 52 0 297 0 0 0 chr17 45063134 45063167 -44441386 + (TG)n Simple_repeat Simple_repeat 2 34 0 2148 108 35 0 chr17 45063180 45063467 -44441086 - AluSx SINE Alu -15 297 1 554 218 0 104 chr17 45063468 45063485 -44441068 + L2 LINE L2 3141 3158 -155 2133 149 0 0 chr17 45063485 45063781 -44440772 - AluSx SINE Alu -16 296 1 554 218 0 104 chr17 45063781 45063956 -44440597 + L2 LINE L2 3158 3313 0 1990 141 28 0 chr17 45064888 45065179 -44439374 - AluJb SINE Alu -13 299 1 1718 180 7 3 chr17 45065623 45065918 -44438635 - AluJo SINE Alu -15 297 2 1981 124 28 7 chr17 45066083 45066218 -44438335 + AluSx SINE Alu 1 132 -180 2265 128 0 0 chr17 45066218 45066516 -44438037 + AluSx SINE Alu 1 298 -14 1981 124 28 7 chr17 45066516 45066671 -44437882 + AluSx SINE Alu 132 297 -15 1703 156 7 7 chr17 45067236 45067552 -44437001 - AluJb SINE Alu 0 316 1 2474 93 0 3 chr17 45068253 45068566 -44435987 - AluSx SINE Alu 0 312 1 279 296 102 0 chr17 45069212 45069320 -44435233 + MIR3 SINE MIR 75 193 -15 2101 126 0 3 chr17 45069442 45069748 -44434805 - AluSx SINE Alu 0 305 1 1988 137 0 14 chr17 45069748 45070041 -44434512 - AluSx SINE Alu -10 302 14 547 140 54 0 chr17 45070913 45071006 -44433547 + U6 snRNA snRNA 5 102 -5 38 0 0 0 chr17 45071007 45071045 -44433508 + AT_rich Low_complexity Low_complexity 1 38 0 198 103 0 0 chr17 45071087 45071116 -44433437 + (A)n Simple_repeat Simple_repeat 1 29 0 963 163 118 0 chr17 45071139 45071317 -44433236 + AluSg/x SINE Alu 105 303 -9 2133 118 3 0 chr17 45071324 45071635 -44432918 + AluSc SINE Alu 1 309 0 2415 54 0 0 chr17 45071642 45071920 -44432633 + AluY SINE Alu 34 311 0 185 348 27 37 chr17 45071941 45072128 -44432425 + L2 LINE L2 1879 2063 -1251 226 348 125 47 chr17 45072430 45072749 -44431804 + L2 LINE L2 2633 2976 -338 874 264 81 51 chr17 45073039 45073179 -44431374 + MLT1H LTR MaLR 39 173 -376 2246 120 7 0 chr17 45073179 45073488 -44431065 + AluSx SINE Alu 1 311 -1 874 264 81 51 chr17 45073488 45073817 -44430736 + MLT1H LTR MaLR 173 522 -27 1692 186 10 35 chr17 45073819 45074131 -44430422 - AluJo SINE Alu -1 311 8 890 269 35 31 chr17 45074185 45074249 -44430304 - MIR SINE MIR 0 262 200 2524 83 0 0 chr17 45074249 45074550 -44430003 + AluY SINE Alu 1 301 -10 890 269 35 31 chr17 45074550 45074745 -44429808 - MIR SINE MIR -62 200 2 2244 105 3 13 chr17 45074858 45075164 -44429389 - AluSq SINE Alu -10 303 1 192 83 62 21 chr17 45075852 45075900 -44428653 + GA-rich Low_complexity Low_complexity 2 51 0 1856 180 7 0 chr17 45076108 45076403 -44428150 + AluJb SINE Alu 1 297 -15 948 180 0 29 chr17 45076410 45076561 -44427992 + AluJb SINE Alu 144 291 -21 2326 114 3 0 chr17 45076561 45076869 -44427684 + AluSx SINE Alu 1 309 -3 948 180 0 29 chr17 45076869 45076889 -44427664 + AluJb SINE Alu 291 310 -2 1716 130 17 55 chr17 45077480 45077773 -44426780 - AluJb SINE Alu -30 282 1 769 269 0 0 chr17 45077872 45078043 -44426510 - MER5B DNA MER1_type -7 171 1 562 290 26 0 chr17 45078285 45078440 -44426113 + MIR SINE MIR 48 206 -56 2037 152 0 3 chr17 45078593 45078889 -44425664 + AluSx SINE Alu 1 295 -17 199 159 16 127 chr17 45079148 45079211 -44425342 + L2 LINE L2 3175 3230 -42 2406 95 0 3 chr17 45079219 45079523 -44425030 - AluSq SINE Alu -10 303 1 1665 177 3 30 chr17 45079736 45080036 -44424517 - AluJo SINE Alu -20 292 1 181 208 132 0 chr17 45080156 45080209 -44424344 - MIR SINE MIR -64 144 85 301 209 115 71 chr17 45080326 45080424 -44424129 + L1ME4a LINE L1 5717 5809 -312 2285 106 3 0 chr17 45080424 45080716 -44423837 + AluSx SINE Alu 1 293 -19 301 209 115 71 chr17 45080716 45080799 -44423754 + L1ME4a LINE L1 5809 5906 -215 497 161 0 80 chr17 45081282 45081394 -44423159 - L1MB8 LINE L1 -7 6171 6069 238 302 133 44 chr17 45081487 45081570 -44422983 + L2 LINE L2 3027 3101 -171 2258 100 10 3 chr17 45081570 45081861 -44422692 - AluSp SINE Alu -20 293 1 238 302 133 44 chr17 45081861 45082002 -44422551 + L2 LINE L2 3101 3271 -1 262 343 47 23 chr17 45082075 45082247 -44422306 + C-rich Low_complexity Low_complexity 4 179 0 942 107 0 0 chr17 45083154 45083276 -44421277 - AluJb SINE Alu -14 298 177 1659 79 0 0 chr17 45084088 45084290 -44420263 - AluSg SINE Alu -12 298 97 629 129 0 0 chr17 45084533 45084626 -44419927 - AluSg SINE Alu -216 94 2 1495 192 118 39 chr17 45085165 45085598 -44418955 + MLT1C LTR MaLR 1 467 0 1731 233 117 4 chr17 45085745 45086234 -44418319 - L1ME3A LINE L1 -5 6165 5622 273 57 0 0 chr17 45086235 45086270 -44418283 + (TC)n Simple_repeat Simple_repeat 2 36 0 721 117 10 0 chr17 45086343 45086446 -44418107 + FLAM_A SINE Alu 12 115 -27 3004 275 101 40 chr17 45086508 45086941 -44417612 - L2 LINE L2 -649 2665 2260 2463 68 14 0 chr17 45086941 45087237 -44417316 - AluSp SINE Alu -7 306 7 3004 275 101 40 chr17 45087237 45087290 -44417263 - L2 LINE L2 -1054 2260 2212 2771 27 0 0 chr17 45087290 45087591 -44416962 - AluY SINE Alu -10 301 1 3004 275 101 40 chr17 45087591 45088495 -44416058 - L2 LINE L2 -1102 2212 1188 562 241 54 83 chr17 45089025 45089266 -44415287 - MIR SINE MIR -26 236 3 1127 132 118 38 chr17 45089743 45090031 -44414522 + MER33 DNA MER1_type 1 311 -13 230 292 223 8 chr17 45090144 45090274 -44414279 + MIR3 SINE MIR 16 173 -35 258 253 30 20 chr17 45090762 45090861 -44413692 + (CGAG)n Simple_repeat Simple_repeat 1 100 0 288 0 0 0 chr17 45091776 45091808 -44412745 + (GA)n Simple_repeat Simple_repeat 1 32 0 1973 151 3 3 chr17 45092364 45092669 -44411884 - AluJb SINE Alu -1 311 7 2284 65 0 14 chr17 45092774 45093052 -44411501 - AluY SINE Alu -37 274 1 337 91 0 0 chr17 45093054 45093109 -44411444 + L1MB7 LINE L1 6114 6168 -16 2112 131 37 0 chr17 45093848 45094146 -44410407 - AluSx SINE Alu -3 309 1 233 241 12 24 chr17 45094835 45094918 -44409635 - L1MC5 LINE L1 -50 7911 7830 429 293 17 72 chr17 45095820 45096001 -44408552 - MIR SINE MIR -32 230 60 2308 114 3 0 chr17 45096455 45096762 -44407791 - AluSq SINE Alu -5 308 1 324 253 13 0 chr17 45096819 45096898 -44407655 - MIR SINE MIR 0 262 183 2192 198 24 4 chr17 45096939 45097403 -44407150 + L1MC4a LINE L1 6605 7077 -731 1875 119 53 30 chr17 45097412 45097697 -44406856 + L1MA8 LINE L1 5765 6063 -228 1980 144 10 17 chr17 45097697 45097996 -44406557 + AluJo SINE Alu 1 297 -15 1875 119 53 30 chr17 45097996 45098105 -44406448 + L1MA8 LINE L1 6063 6168 -123 969 216 0 0 chr17 45098106 45098277 -44406276 + FRAM SINE Alu 1 171 -5 197 274 142 0 chr17 45098289 45098395 -44406158 + L2 LINE L2 3193 3313 0 2001 142 17 0 chr17 45098558 45098846 -44405707 - AluSx SINE Alu -19 293 1 215 324 172 20 chr17 45101622 45101826 -44402727 - L2 LINE L2 -207 3065 2831 1164 149 11 0 chr17 45102222 45102397 -44402156 - AluSg/x SINE Alu -1 309 133 2296 105 10 0 chr17 45102398 45102704 -44401849 - AluSx SINE Alu -3 309 1 267 54 0 0 chr17 45102926 45102963 -44401590 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 606 187 0 72 chr17 45102963 45103102 -44401451 - FRAM SINE Alu -29 147 19 312 102 0 0 chr17 45103204 45103253 -44401300 + (TG)n Simple_repeat Simple_repeat 1 49 0 667 144 17 42 chr17 45103557 45103568 -44400985 + GA-rich Low_complexity Low_complexity 1 11 -516 2238 134 0 0 chr17 45103568 45103874 -44400679 + AluSx SINE Alu 1 306 -6 667 144 17 42 chr17 45103874 45104098 -44400455 + GA-rich Low_complexity Low_complexity 11 527 0 324 0 0 0 chr17 45104114 45104177 -44400376 + (CAAG)n Simple_repeat Simple_repeat 1 99 0 324 0 0 0 chr17 45104177 45104213 -44400340 + (CAAG)n Simple_repeat Simple_repeat 2 37 0 2555 84 0 0 chr17 45104213 45104522 -44400031 + AluSx SINE Alu 4 312 0 989 110 0 34 chr17 45104540 45104686 -44399867 + FLAM_C SINE Alu 3 143 0 385 262 0 0 chr17 45104694 45104778 -44399775 + AluJ/FRAM SINE Alu 219 302 0 1336 200 237 12 chr17 45104946 45105432 -44399121 + LTR61 LTR ERV1 1 595 0 2254 126 0 0 chr17 45105605 45105906 -44398647 + AluSx SINE Alu 1 301 -11 592 191 53 23 chr17 45105916 45106047 -44398506 + AluJo SINE Alu 3 137 -175 1282 108 0 0 chr17 45106147 45106314 -44398239 + AluY SINE Alu 133 299 -12 299 288 65 59 chr17 45106512 45106573 -44397980 + L2 LINE L2 3117 3176 -96 2330 112 3 0 chr17 45106573 45106877 -44397676 - AluSx SINE Alu -7 305 1 299 288 65 59 chr17 45106877 45106968 -44397585 + L2 LINE L2 3176 3270 -2 1939 157 0 23 chr17 45107129 45107434 -44397119 - AluJo SINE Alu -14 298 1 2223 134 0 8 chr17 45107442 45107921 -44396632 - AluSg1 SINE Alu -8 301 1 2339 114 0 13 chr17 45107674 45108057 -44396496 - AluSq SINE Alu -3 310 1 2234 93 0 42 chr17 45108878 45109190 -44395363 - AluSx SINE Alu -13 299 1 400 278 70 104 chr17 45110154 45110287 -44394266 + MIR SINE MIR 2 138 -124 2376 91 3 0 chr17 45110287 45110585 -44393968 + AluSp SINE Alu 1 299 -14 1977 101 0 22 chr17 45110589 45110885 -44393668 + AluSp SINE Alu 23 312 0 400 278 70 104 chr17 45110885 45110896 -44393657 + MIR SINE MIR 141 151 -111 2270 99 0 7 chr17 45110896 45111198 -44393355 + AluSq SINE Alu 1 300 -13 400 278 70 104 chr17 45111198 45111316 -44393237 + MIR SINE MIR 151 262 0 2489 76 0 0 chr17 45111424 45111726 -44392827 + AluY SINE Alu 1 302 -9 796 137 33 162 chr17 45111728 45111969 -44392584 - MER6B DNA MER2_type 0 210 1 445 306 137 9 chr17 45114439 45114658 -44389895 - MIR SINE MIR -3 259 13 1192 189 8 37 chr17 45118199 45118355 -44386198 - AluJb SINE Alu -18 294 146 1612 134 95 42 chr17 45118355 45118638 -44385915 - AluSx SINE Alu -14 298 1 1192 189 8 37 chr17 45118638 45118724 -44385829 - AluJb SINE Alu -166 146 59 699 172 167 48 chr17 45118970 45119097 -44385456 + MER3 DNA MER1_type 1 112 -97 357 24 0 0 chr17 45119097 45119139 -44385414 + (TA)n Simple_repeat Simple_repeat 2 43 0 1907 162 0 0 chr17 45119139 45119423 -44385130 - AluJb SINE Alu -28 284 1 699 172 167 48 chr17 45119423 45119480 -44385073 + MER3 DNA MER1_type 111 208 -1 424 206 284 26 chr17 45121101 45121295 -44383258 - HAL1b LINE L1 -27 1321 1078 244 45 0 45 chr17 45124165 45124209 -44380344 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 2295 105 16 0 chr17 45125413 45125717 -44378836 - AluSg SINE Alu -1 309 1 266 265 12 12 chr17 45127555 45127638 -44376915 + CT-rich Low_complexity Low_complexity 2 84 0 592 263 201 10 chr17 45128299 45128683 -44375870 + L1MC4a LINE L1 5716 6172 -1636 2400 97 7 0 chr17 45129429 45129738 -44374815 - AluSq SINE Alu -2 311 1 2358 100 3 0 chr17 45130423 45130723 -44373830 - AluSq SINE Alu -12 301 1 217 228 112 100 chr17 45130771 45131021 -44373532 + L2 LINE L2 1946 2198 -1116 1119 156 0 33 chr17 45131033 45131213 -44373340 - AluJb SINE Alu 0 312 139 995 180 0 23 chr17 45131313 45131485 -44373068 + FRAM SINE Alu 8 175 -1 874 264 81 51 chr17 45131487 45131816 -44372737 - MLT1H LTR MaLR -27 522 173 2246 120 7 0 chr17 45131816 45132125 -44372428 - AluSx SINE Alu -1 311 1 874 264 81 51 chr17 45132125 45132265 -44372288 - MLT1H LTR MaLR -376 173 39 226 348 125 47 chr17 45132555 45132874 -44371679 - L2 LINE L2 -338 2976 2633 185 348 27 37 chr17 45133176 45133363 -44371190 - L2 LINE L2 -1251 2063 1879 2385 58 0 0 chr17 45133384 45133662 -44370891 - AluY SINE Alu 0 311 34 2142 118 3 0 chr17 45133668 45133980 -44370573 - AluSc SINE Alu 0 309 1 963 163 118 0 chr17 45133987 45134165 -44370388 - AluSg/x SINE Alu -9 303 105 198 103 0 0 chr17 45134188 45134217 -44370336 + (T)n Simple_repeat Simple_repeat 1 29 0 38 0 0 0 chr17 45134259 45134297 -44370256 + AT_rich Low_complexity Low_complexity 1 38 0 533 151 54 0 chr17 45134298 45134391 -44370162 - U6 snRNA snRNA -5 102 5 1980 139 0 14 chr17 45135263 45135557 -44368996 + AluSx SINE Alu 14 303 -9 2095 126 0 3 chr17 45135557 45135863 -44368690 + AluSx SINE Alu 1 305 0 279 296 102 0 chr17 45135984 45136092 -44368461 - MIR3 SINE MIR -15 193 75 2358 83 0 7 chr17 45136739 45137040 -44367513 + AluSg SINE Alu 1 299 -11 2154 116 3 10 chr17 45137572 45137887 -44366666 + AluSg SINE Alu 1 313 0 388 247 12 0 chr17 45137888 45137969 -44366584 - MER63 DNA MER1_type -328 734 27 323 274 215 46 chr17 45137984 45138203 -44366350 + MIR SINE MIR 7 262 0 322 323 10 0 chr17 45138223 45138319 -44366234 - MIR SINE MIR -68 140 44 1831 113 74 28 chr17 45138402 45138685 -44365868 - AluJb SINE Alu -16 296 1 1727 154 0 33 chr17 45139758 45140101 -44364452 + AluJo SINE Alu 1 312 0 2133 146 0 9 chr17 45140302 45140617 -44363936 - AluJb SINE Alu 0 312 1 273 57 0 0 chr17 45140835 45140870 -44363683 + (TG)n Simple_repeat Simple_repeat 2 36 0 185 0 40 0 chr17 45141018 45141043 -44363510 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 725 159 0 0 chr17 45141043 45141156 -44363397 - FLAM_C SINE Alu -22 121 9 1718 180 7 3 chr17 45142160 45142455 -44362098 - AluJo SINE Alu -15 297 2 2150 108 35 0 chr17 45142620 45142907 -44361646 + AluSx SINE Alu 1 297 -15 297 0 0 0 chr17 45142920 45142953 -44361600 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 157 20 20 chr17 45142984 45143035 -44361518 + GA-rich Low_complexity Low_complexity 2 52 0 2214 103 0 10 chr17 45143237 45143537 -44361016 + AluSx SINE Alu 1 297 -15 312 172 0 0 chr17 45143584 45143642 -44360911 + GA-rich Low_complexity Low_complexity 3 60 0 780 231 125 5 chr17 45143664 45143872 -44360681 - LTR16A LTR ERVL -11 439 207 1663 164 22 32 chr17 45144074 45144386 -44360167 + AluJo SINE Alu 4 312 0 686 288 17 29 chr17 45144408 45144648 -44359905 - L2 LINE L2 -246 3067 2831 415 233 68 10 chr17 45144709 45144812 -44359741 + L2 LINE L2 3164 3272 0 394 204 18 0 chr17 45144824 45144937 -44359616 + (TGGA)n Simple_repeat Simple_repeat 4 118 0 354 331 80 0 chr17 45145257 45145408 -44359145 - MIR3 SINE MIR -1 207 45 1630 181 17 10 chr17 45145508 45145800 -44358753 - AluJb SINE Alu -13 299 6 2425 84 0 0 chr17 45145885 45146181 -44358372 - AluSg SINE Alu -14 296 1 2266 102 7 20 chr17 45146181 45146484 -44358069 - AluSq SINE Alu -14 299 1 907 154 0 7 chr17 45146484 45146620 -44357933 - AluJo SINE Alu -177 135 1 2391 55 41 3 chr17 45147335 45147627 -44356926 - AluY SINE Alu -8 303 1 208 308 154 10 chr17 45147670 45147774 -44356779 + L3b LINE CR1 1354 1472 -111 651 297 177 6 chr17 45147774 45148187 -44356366 + L3 LINE CR1 988 1533 -44 307 343 10 0 chr17 45149140 45149239 -44355314 - L3 LINE CR1 -82 1495 1396 764 153 0 36 chr17 45150113 45150250 -44354303 - FLAM_A SINE Alu -1 132 1 2048 117 19 29 chr17 45150272 45150579 -44353974 - AluSx SINE Alu -8 304 1 2272 148 2 84 chr17 45151336 45151639 -44352914 - L1MB8 LINE L1 -42 6136 5810 1819 138 44 4 chr17 45151639 45151914 -44352639 + AluJo SINE Alu 1 286 -26 333 0 0 0 chr17 45151915 45151952 -44352601 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2272 148 2 84 chr17 45151952 45152189 -44352364 - L1MB8 LINE L1 -367 5811 5546 2041 141 3 13 chr17 45152299 45152611 -44351942 - AluJb SINE Alu -3 309 1 2095 108 22 0 chr17 45153159 45153464 -44351089 + AluSx SINE Alu 1 311 0 1519 195 13 44 chr17 45153481 45153624 -44350929 + AluJb SINE Alu 1 147 -165 2389 104 3 3 chr17 45153624 45153932 -44350621 + AluSx SINE Alu 1 308 -4 1519 195 13 44 chr17 45153932 45154106 -44350447 + AluJb SINE Alu 147 308 -4 213 292 31 15 chr17 45154230 45154295 -44350258 - MIR SINE MIR -64 144 79 2102 120 48 0 chr17 45154858 45155149 -44349404 + AluSx SINE Alu 1 305 -7 1873 133 7 41 chr17 45155910 45156204 -44348349 - AluJo SINE Alu -28 284 1 294 0 0 26 chr17 45156864 45156902 -44347651 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2329 92 0 0 chr17 45156902 45157185 -44347368 - AluSx SINE Alu -1 320 1 242 28 0 28 chr17 45157466 45157502 -44347051 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 630 268 50 29 chr17 45158210 45158449 -44346104 - L1ME LINE L1 -322 5799 5556 1002 168 0 22 chr17 45158930 45159109 -44345444 - AluJb SINE Alu -1 311 137 2301 105 0 0 chr17 45159109 45159403 -44345150 - AluSx SINE Alu -18 294 1 1501 132 4 13 chr17 45159445 45159673 -44344880 + AluSg/x SINE Alu 75 300 -10 2670 49 0 0 chr17 45159675 45159979 -44344574 + AluY SINE Alu 2 305 -6 482 236 33 61 chr17 45159980 45160192 -44344361 - L1MC4 LINE L1 -50 7992 7787 434 123 0 86 chr17 45160422 45160503 -44344050 + AluJ/FRAM SINE Alu 224 297 -15 2399 143 121 36 chr17 45160560 45160867 -44343686 - LTR64 LTR ERVK -12 546 178 1588 144 0 9 chr17 45160867 45161096 -44343457 - AluJb SINE Alu -1 311 85 2399 143 121 36 chr17 45161096 45161291 -44343262 - LTR64 LTR ERVK -380 178 1 1404 131 0 0 chr17 45161314 45161505 -44343048 + AluY SINE Alu 1 191 -120 2232 102 3 47 chr17 45161860 45162182 -44342371 + AluSx SINE Alu 4 311 -1 21 0 0 0 chr17 45162412 45162433 -44342120 + AT_rich Low_complexity Low_complexity 1 21 0 871 0 0 0 chr17 45162540 45162633 -44341920 + HY4 scRNA scRNA 1 93 0 2167 111 0 7 chr17 45162687 45162985 -44341568 - AluY SINE Alu -15 296 1 930 198 6 17 chr17 45163212 45163384 -44341169 - AluJo SINE Alu -11 301 132 323 244 156 11 chr17 45163404 45163494 -44341059 + HAL1b LINE L1 964 1066 -282 2235 125 3 0 chr17 45163556 45163861 -44340692 - AluSq SINE Alu -7 306 1 549 140 252 9 chr17 45163915 45164022 -44340531 - AluJo SINE Alu -178 134 2 1477 105 0 19 chr17 45164051 45164260 -44340293 - AluSg/x SINE Alu -23 289 85 2758 42 0 0 chr17 45164268 45164579 -44339974 - AluY SINE Alu 0 311 1 1409 129 9 21 chr17 45164579 45164812 -44339741 - AluSq SINE Alu -3 310 81 658 153 0 10 chr17 45164919 45165017 -44339536 - AluJ/FLAM SINE Alu -213 99 3 669 302 114 31 chr17 45165024 45165253 -44339300 + L2 LINE L2 2359 2568 -746 2100 107 55 0 chr17 45165253 45165544 -44339009 - AluSq SINE Alu -6 307 1 669 302 114 31 chr17 45165544 45165701 -44338852 + L2 LINE L2 2568 2777 -537 750 178 0 8 chr17 45165719 45165837 -44338716 + FLAM_C SINE Alu 2 118 -25 2225 140 0 6 chr17 45165856 45166170 -44338383 - AluSx SINE Alu 0 312 1 2386 158 18 5 chr17 45166261 45166703 -44337850 + L1MB7 LINE L1 5679 6126 -58 1878 189 7 0 chr17 45166714 45167020 -44337533 - AluJo SINE Alu -4 308 1 2314 117 0 0 chr17 45167030 45167337 -44337216 - AluSq SINE Alu -2 311 5 2259 123 10 3 chr17 45167353 45167663 -44336890 - AluSx SINE Alu 0 312 1 359 118 0 27 chr17 45167663 45167736 -44336817 + L1MB7 LINE L1 6110 6178 0 419 272 129 84 chr17 45167740 45168222 -44336331 + L2 LINE L2 2778 3272 0 314 262 196 65 chr17 45168753 45169003 -44335550 - L1MC4 LINE L1 -996 7046 6830 2293 115 3 3 chr17 45169003 45169315 -44335238 + AluSx SINE Alu 1 312 0 314 262 196 65 chr17 45169315 45169326 -44335227 - L1MC4 LINE L1 -1212 6830 6822 2052 118 47 3 chr17 45169326 45169623 -44334930 + AluSg SINE Alu 1 310 0 314 262 196 65 chr17 45169623 45169709 -44334844 - L1MC4 LINE L1 -1220 6822 6563 21 36 0 0 chr17 45169722 45169750 -44334803 + AT_rich Low_complexity Low_complexity 1 28 0 741 171 23 0 chr17 45169752 45169881 -44334672 + FLAM_C SINE Alu 1 132 -1 466 193 0 0 chr17 45170310 45170393 -44334160 - FLAM_A SINE Alu -16 126 44 6439 40 12 7 chr17 45170600 45171348 -44333205 + SVA Other Other 635 1386 0 26 0 0 0 chr17 45171348 45171374 -44333179 + AT_rich Low_complexity Low_complexity 1 26 0 2199 123 3 10 chr17 45171411 45171719 -44332834 + AluSq SINE Alu 1 306 -7 421 314 80 73 chr17 45171800 45171826 -44332727 - L2 LINE L2 0 3272 3248 2194 139 0 0 chr17 45171826 45172127 -44332426 + AluSx SINE Alu 1 301 -11 421 314 80 73 chr17 45172127 45172188 -44332365 - L2 LINE L2 -24 3248 3189 1877 181 0 3 chr17 45172188 45172492 -44332061 + AluJb SINE Alu 1 303 -9 421 314 80 73 chr17 45172492 45172830 -44331723 - L2 LINE L2 -83 3189 2843 2191 132 0 0 chr17 45173006 45173310 -44331243 - AluSg SINE Alu -6 304 1 2002 134 20 3 chr17 45173315 45173613 -44330940 - AluSx SINE Alu -9 303 1 233 209 60 0 chr17 45173617 45173684 -44330869 - Charlie8 DNA MER1_type -2258 159 89 420 271 109 16 chr17 45173787 45173979 -44330574 + MIR SINE MIR 53 262 0 2261 107 7 0 chr17 45174088 45174378 -44330175 + AluSx SINE Alu 1 292 -20 2340 108 0 3 chr17 45175654 45175961 -44328592 - AluSx SINE Alu -6 306 1 2572 47 0 3 chr17 45176019 45176315 -44328238 - AluY SINE Alu -16 295 1 1261 135 33 49 chr17 45177554 45177799 -44326754 - L1MB8 LINE L1 -5 6173 5933 261 152 0 22 chr17 45178069 45178115 -44326438 + L2 LINE L2 3268 3312 -1 311 341 89 7 chr17 45178121 45178256 -44326297 - MIR SINE MIR -115 147 2 1926 150 0 20 chr17 45178313 45178619 -44325934 + AluSx SINE Alu 1 300 -12 1803 181 7 0 chr17 45179264 45179551 -44325002 - AluJo SINE Alu -23 289 1 2286 121 0 0 chr17 45179696 45179993 -44324560 + AluSx SINE Alu 1 297 -15 2228 102 3 0 chr17 45180198 45180505 -44324048 + AluSp SINE Alu 1 308 0 2512 47 7 13 chr17 45181451 45181751 -44322802 + AluY SINE Alu 1 298 -13 1403 173 0 13 chr17 45181835 45182060 -44322493 + AluJb SINE Alu 3 224 -88 826 200 30 24 chr17 45182091 45182256 -44322297 + FRAM SINE Alu 1 166 0 216 209 0 0 chr17 45182617 45182660 -44321893 + A-rich Low_complexity Low_complexity 1 43 0 379 338 120 32 chr17 45182822 45183038 -44321515 + L2 LINE L2 3031 3265 -7 2215 112 30 0 chr17 45183064 45183367 -44321186 + AluSx SINE Alu 1 312 0 1899 126 8 0 chr17 45183707 45183968 -44320585 + AluSx SINE Alu 38 300 -12 1557 167 4 25 chr17 45183973 45184249 -44320304 + AluJo SINE Alu 1 270 -42 2270 90 0 45 chr17 45184265 45184575 -44319978 + AluSg SINE Alu 1 296 -14 2015 147 20 0 chr17 45184577 45184883 -44319670 + AluJb SINE Alu 1 312 0 906 152 6 32 chr17 45185624 45185782 -44318771 - MER5A DNA MER1_type -34 155 2 2387 71 0 3 chr17 45186217 45186513 -44318040 + AluY SINE Alu 1 295 -16 2329 112 3 0 chr17 45186520 45186824 -44317729 + AluSx SINE Alu 2 306 -6 776 189 81 0 chr17 45186869 45187017 -44317536 + FAM SINE Alu 1 48 -1 2322 105 0 0 chr17 45187038 45187333 -44317220 + AluSx SINE Alu 1 295 -17 1535 140 18 113 chr17 45187342 45187671 -44316882 + AluJb SINE Alu 1 298 -14 466 313 69 28 chr17 45187895 45188112 -44316441 + MIR SINE MIR 18 243 -19 618 312 93 0 chr17 45188123 45188328 -44316225 + MIR SINE MIR 15 238 -24 658 71 0 0 chr17 45188444 45188528 -44316025 - HY4 scRNA scRNA -9 84 1 1016 117 93 0 chr17 45189674 45189836 -44314717 - AluJb SINE Alu -1 311 135 261 319 0 0 chr17 45190152 45190221 -44314332 + MIR SINE MIR 191 259 -3 210 37 0 0 chr17 45190990 45191017 -44313536 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 471 63 380 0 chr17 45191024 45191103 -44313450 - AluYa5 SINE Alu -48 263 155 694 140 0 0 chr17 45191203 45191303 -44313250 + AluSp/q SINE Alu 189 288 -25 709 136 0 0 chr17 45191311 45191414 -44313139 + AluY SINE Alu 2 104 -207 316 115 0 19 chr17 45191414 45191466 -44313087 + AluSc SINE Alu 203 253 -46 2165 134 0 3 chr17 45191591 45191897 -44312656 + AluSx SINE Alu 1 305 -7 2206 80 7 11 chr17 45192064 45192351 -44312202 + AluY SINE Alu 1 286 -25 2331 88 0 7 chr17 45192478 45192773 -44311780 + AluY SINE Alu 1 293 -18 2000 101 49 14 chr17 45193287 45193575 -44310978 + AluSc SINE Alu 1 298 -11 542 213 158 49 chr17 45193810 45193974 -44310579 - MER5A DNA MER1_type -6 183 2 2479 60 3 3 chr17 45194393 45194691 -44309862 - AluY SINE Alu -13 298 1 1886 143 7 27 chr17 45194693 45194987 -44309566 - AluSg SINE Alu -22 288 1 620 226 124 0 chr17 45195169 45195346 -44309207 + MIR SINE MIR 44 242 -20 2423 83 7 0 chr17 45195377 45195678 -44308875 - AluSx SINE Alu -9 303 1 772 145 73 0 chr17 45195679 45195803 -44308750 - FLAM_A SINE Alu 0 142 10 371 156 0 0 chr17 45195830 45195894 -44308659 - AluYb8 SINE Alu -5 297 234 847 87 118 8 chr17 45195896 45196023 -44308530 - AluYb8 SINE Alu -176 142 2 2104 125 0 7 chr17 45196086 45196382 -44308171 - AluSq SINE Alu -18 295 2 2170 115 3 7 chr17 45196445 45196750 -44307803 - AluSq SINE Alu -9 304 1 264 263 38 25 chr17 45196750 45196830 -44307723 - L2 LINE L2 -7 3306 3226 301 89 0 0 chr17 45197520 45197565 -44306988 + Alu SINE Alu 1 45 -258 1579 108 5 5 chr17 45197565 45197778 -44306775 + AluSg/x SINE Alu 88 300 -12 1992 130 7 14 chr17 45197795 45198079 -44306474 + AluSx SINE Alu 1 282 -30 396 0 0 0 chr17 45198105 45198149 -44306404 + (TA)n Simple_repeat Simple_repeat 1 44 0 2235 118 0 0 chr17 45198311 45198608 -44305945 - AluY SINE Alu -12 299 3 834 164 0 0 chr17 45198611 45198739 -44305814 - AluSp/q SINE Alu 0 313 186 517 183 33 33 chr17 45198845 45198965 -44305588 + FRAM SINE Alu 40 159 -17 1826 71 0 0 chr17 45198968 45199194 -44305359 + AluY SINE Alu 86 311 0 2333 107 0 0 chr17 45199530 45199830 -44304723 + AluSc SINE Alu 1 300 -9 22 0 0 0 chr17 45199904 45199926 -44304627 + AT_rich Low_complexity Low_complexity 1 22 0 1712 156 3 28 chr17 45200715 45200998 -44303555 - AluJo SINE Alu -23 289 14 835 158 8 0 chr17 45201001 45201128 -44303425 - FLAM_A SINE Alu -5 128 1 2223 110 23 0 chr17 45201565 45201865 -44302688 - AluSx SINE Alu -5 307 1 345 280 0 0 chr17 45201964 45202039 -44302514 - HAL1 LINE L1 -731 1776 1702 510 100 0 14 chr17 45202203 45202273 -44302280 - Alu SINE Alu -248 70 2 2019 103 92 0 chr17 45202424 45202705 -44301848 - AluSq SINE Alu -6 307 1 481 197 143 41 chr17 45202881 45203028 -44301525 - L2 LINE L2 -9 3304 3143 1933 131 10 7 chr17 45203028 45203318 -44301235 - AluSx SINE Alu -21 291 1 551 181 17 17 chr17 45203447 45203563 -44300990 + AluJb SINE Alu 190 305 -7 368 158 0 37 chr17 45203597 45203679 -44300874 - L1MA8 LINE L1 -234 6057 5979 2135 96 3 20 chr17 45204240 45204561 -44299992 - AluSp SINE Alu 0 313 1 190 246 70 0 chr17 45205071 45205128 -44299425 - MIR3 SINE MIR -38 170 110 1495 171 96 43 chr17 45205317 45205472 -44299081 + MLT1A1 LTR MaLR 3 148 -217 2473 81 0 16 chr17 45205472 45205782 -44298771 + AluSq SINE Alu 1 305 -8 1495 171 96 43 chr17 45205782 45205971 -44298582 + MLT1A1 LTR MaLR 148 365 0 269 215 31 0 chr17 45206174 45206239 -44298314 + L1MC4a LINE L1 5875 5941 -1867 1822 184 7 3 chr17 45206296 45206595 -44297958 + AluJb SINE Alu 1 300 -12 2387 82 3 0 chr17 45206595 45206888 -44297665 + AluSq SINE Alu 1 294 -19 1027 157 0 7 chr17 45206950 45207103 -44297450 + AluSg/x SINE Alu 145 296 -16 573 225 162 9 chr17 45207323 45207545 -44297008 - L1M4 LINE L1 -3531 2615 2360 445 167 0 0 chr17 45207545 45207611 -44296942 + MER75 DNA T2_type 1 66 -448 2245 101 3 0 chr17 45207690 45207998 -44296555 + AluSc SINE Alu 1 309 0 943 154 7 0 chr17 45207998 45208147 -44296406 + AluSg/x SINE Alu 134 283 -29 242 273 108 22 chr17 45208737 45208773 -44295780 + L1MC/D LINE L1 5631 5662 -2146 2110 111 3 0 chr17 45208773 45209062 -44295491 + AluSq SINE Alu 1 290 -23 242 273 108 22 chr17 45209062 45209164 -44295389 + L1MC/D LINE L1 5662 5781 -2027 1648 138 17 37 chr17 45209185 45209483 -44295070 + AluSx SINE Alu 20 311 -1 205 300 81 69 chr17 45210084 45210331 -44294222 + L2 LINE L2 2939 3188 -84 997 161 0 12 chr17 45210404 45210599 -44293954 + AluJo SINE Alu 123 315 0 1094 102 48 6 chr17 45210711 45210877 -44293676 - AluSq SINE Alu -7 306 134 1494 127 4 4 chr17 45210877 45211105 -44293448 - AluSg/x SINE Alu -13 299 72 2379 72 0 10 chr17 45211908 45212214 -44292339 - AluY SINE Alu -8 303 1 335 146 85 24 chr17 45213052 45213134 -44291419 + L1 LINE L1 4019 4105 -2041 2729 13 0 0 chr17 45213134 45213440 -44291113 - AluY SINE Alu -5 306 1 595 181 53 23 chr17 45213440 45213573 -44290980 - AluJb SINE Alu -12 300 164 353 327 79 18 chr17 45213780 45213945 -44290608 - MIR SINE MIR -34 228 54 835 96 96 0 chr17 45213946 45214081 -44290472 - AluSg/x SINE Alu -1 311 164 332 303 95 39 chr17 45214186 45214486 -44290067 - L1MCa LINE L1 -1548 4878 1820 652 133 97 0 chr17 45214496 45214609 -44289944 - FLAM_C SINE Alu -18 125 2 888 280 45 55 chr17 45214789 45214986 -44289567 - L1MC4a LINE L1 -1883 5925 5728 2215 95 0 0 chr17 45214986 45215280 -44289273 - AluSq SINE Alu -18 295 2 888 280 45 55 chr17 45215280 45215504 -44289049 - L1MC4a LINE L1 -2080 5728 5508 1970 133 0 37 chr17 45215556 45215880 -44288673 - AluSx SINE Alu 0 312 1 1406 101 0 19 chr17 45215908 45216117 -44288436 - AluSg/x SINE Alu -23 289 85 2171 120 0 0 chr17 45216369 45216668 -44287885 + AluSx SINE Alu 1 299 -13 1745 151 25 0 chr17 45217520 45217805 -44286748 - AluJb SINE Alu -9 303 12 1545 91 5 0 chr17 45217912 45218121 -44286432 + AluSg/x SINE Alu 85 294 -18 702 342 42 27 chr17 45218125 45218301 -44286252 - L2 LINE L2 -624 2690 2518 2068 97 35 0 chr17 45218301 45218589 -44285964 + AluSx SINE Alu 12 309 -3 702 342 42 27 chr17 45218589 45218816 -44285737 - L2 LINE L2 -796 2518 2281 1439 159 104 11 chr17 45219589 45219859 -44284694 + AluJo SINE Alu 1 295 -17 2127 111 3 3 chr17 45219860 45220157 -44284396 + AluSc SINE Alu 1 297 -12 283 311 75 94 chr17 45220158 45220425 -44284128 - L2 LINE L2 -1 3271 3010 1636 164 37 3 chr17 45220590 45220888 -44283665 + AluJo SINE Alu 1 308 -4 1137 123 6 0 chr17 45220924 45221094 -44283459 - AluSg/x SINE Alu -15 297 127 303 261 27 101 chr17 45221422 45221610 -44282943 + L2 LINE L2 2892 3065 -248 211 321 37 0 chr17 45221693 45221774 -44282779 + L2 LINE L2 3226 3309 -4 186 133 0 0 chr17 45222069 45222099 -44282454 + (CCCTAG)n Simple_repeat Simple_repeat 5 34 0 2429 55 3 6 chr17 45222639 45222951 -44281602 + AluSx SINE Alu 1 311 -1 2405 39 0 0 chr17 45222951 45223234 -44281319 + AluY SINE Alu 1 283 -28 2076 94 4 0 chr17 45223392 45223669 -44280884 + AluSq SINE Alu 1 278 -35 399 41 0 0 chr17 45224217 45224266 -44280287 + (CA)n Simple_repeat Simple_repeat 2 50 0 1794 133 39 14 chr17 45224268 45224553 -44280000 + AluSx SINE Alu 1 292 -20 1653 140 19 8 chr17 45224564 45224828 -44279725 + AluSx SINE Alu 1 267 -45 198 0 0 0 chr17 45224832 45224854 -44279699 + (CA)n Simple_repeat Simple_repeat 1 22 0 2327 92 0 0 chr17 45225455 45225761 -44278792 + AluSg SINE Alu 1 306 -4 5508 73 33 56 chr17 45225846 45226733 -44277820 + SVA Other Other 1 866 -520 237 376 26 17 chr17 45226907 45227024 -44277529 - L2 LINE L2 -535 2779 2662 2239 104 0 16 chr17 45227170 45227307 -44277246 + AluSp SINE Alu 1 139 -174 2295 103 0 0 chr17 45227307 45227617 -44276936 + AluSx SINE Alu 3 312 0 2239 104 0 16 chr17 45227617 45227797 -44276756 + AluSp SINE Alu 139 313 0 364 114 0 29 chr17 45227816 45227886 -44276667 + (GAAA)n Simple_repeat Simple_repeat 4 71 0 2200 98 7 0 chr17 45227959 45228265 -44276288 + AluSq SINE Alu 1 308 -5 1983 134 0 3 chr17 45228290 45228597 -44275956 + AluSx SINE Alu 1 306 -6 1030 128 26 0 chr17 45228726 45228882 -44275671 + L1PA8 LINE L1 6006 6165 -7 2342 83 3 0 chr17 45228884 45229196 -44275357 + AluSp SINE Alu 1 313 0 262 298 18 44 chr17 45230492 45230606 -44273947 + L2 LINE L2 3202 3312 -1 729 94 86 26 chr17 45231814 45231931 -44272622 - FLAM_A SINE Alu -13 129 6 1786 162 0 3 chr17 45232151 45232448 -44272105 - AluJb SINE Alu -12 300 5 1946 116 0 20 chr17 45232698 45232823 -44271730 + AluSx SINE Alu 12 138 -174 2289 64 0 0 chr17 45232823 45233133 -44271420 + AluSc SINE Alu 1 310 0 1946 116 0 20 chr17 45233133 45233299 -44271254 + AluSx SINE Alu 138 298 -14 2304 73 3 3 chr17 45233304 45233606 -44270947 + AluY SINE Alu 1 302 -9 825 185 83 0 chr17 45233606 45233763 -44270790 + AluJb SINE Alu 135 304 -8 234 281 0 0 chr17 45233802 45233859 -44270694 + Charlie8 DNA MER1_type 220 276 -2141 291 348 0 0 chr17 45234101 45234190 -44270363 - L2 LINE L2 0 3272 3184 758 228 118 50 chr17 45234431 45234587 -44269966 + MIR SINE MIR 1 146 -116 2072 116 0 0 chr17 45234587 45234913 -44269640 + AluSx SINE Alu 1 326 0 758 228 118 50 chr17 45234913 45235034 -44269519 + MIR SINE MIR 146 257 -5 209 231 0 62 chr17 45235206 45235271 -44269282 + L2 LINE L2 3203 3263 -9 994 105 0 7 chr17 45235673 45235809 -44268744 + AluSq/x SINE Alu 1 137 -176 2055 108 24 0 chr17 45235809 45236106 -44268447 + AluSx SINE Alu 1 304 -8 220 227 0 15 chr17 45236117 45236183 -44268370 + MIR SINE MIR 48 112 -150 1464 142 27 112 chr17 45240086 45240233 -44264320 + AluYb8 SINE Alu 1 104 -214 2310 86 3 3 chr17 45240233 45240546 -44264007 + AluSp SINE Alu 1 313 0 1464 142 27 112 chr17 45240546 45240736 -44263817 + AluYb8 SINE Alu 104 309 -9 892 154 26 0 chr17 45240736 45240892 -44263661 + AluSq SINE Alu 137 296 -17 316 143 0 0 chr17 45240916 45240972 -44263581 - AluJb SINE Alu -2 300 245 960 158 7 0 chr17 45240972 45241124 -44263429 - AluJb SINE Alu -159 153 1 2263 95 3 0 chr17 45241249 45241554 -44262999 + AluSq SINE Alu 1 306 -7 480 298 8 0 chr17 45242904 45243035 -44261518 - MIR SINE MIR 0 262 131 287 323 121 35 chr17 45243114 45243312 -44261241 + MIR SINE MIR 40 254 -8 191 36 36 0 chr17 45243313 45243341 -44261212 + (TAA)n Simple_repeat Simple_repeat 1 29 0 2397 80 0 3 chr17 45244539 45244853 -44259700 + AluSp SINE Alu 1 313 0 22 56 0 0 chr17 45246038 45246074 -44258479 + GC_rich Low_complexity Low_complexity 1 36 0 182 118 29 0 chr17 45246125 45246159 -44258394 + (CGG)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr17 45246370 45246398 -44258155 + GC_rich Low_complexity Low_complexity 1 28 0 2171 79 27 3 chr17 45246553 45246845 -44257708 + AluSx SINE Alu 1 299 -13 2034 104 3 14 chr17 45246846 45247143 -44257410 + AluSx SINE Alu 1 294 -18 2348 48 20 3 chr17 45247143 45247436 -44257117 + AluY SINE Alu 1 298 -13 1014 169 11 0 chr17 45247714 45247892 -44256661 - AluJo SINE Alu -11 301 122 365 120 0 0 chr17 45247892 45247942 -44256611 - MER66B LTR ERV1 -141 345 296 812 140 49 21 chr17 45247942 45248085 -44256468 - AluJo SINE Alu -165 147 1 1481 80 175 16 chr17 45248155 45248406 -44256147 - AluSc SINE Alu -18 291 1 340 286 6 23 chr17 45249083 45249258 -44255295 + G-rich Low_complexity Low_complexity 6 177 0 22 0 0 0 chr17 45249729 45249751 -44254802 + GC_rich Low_complexity Low_complexity 1 22 0 2184 99 7 3 chr17 45250306 45250610 -44253943 + AluSx SINE Alu 1 305 -7 2375 63 3 31 chr17 45253552 45253870 -44250683 + AluY SINE Alu 1 309 -2 441 286 180 59 chr17 45254332 45254859 -44249694 - L2 LINE L2 0 3272 2675 861 156 0 67 chr17 45254910 45255090 -44249463 + FRAM SINE Alu 8 175 -1 2314 75 0 35 chr17 45256000 45256185 -44248368 - AluSc SINE Alu -2 307 136 2206 84 7 3 chr17 45256185 45256481 -44248072 - AluSp SINE Alu -16 297 1 2314 75 0 35 chr17 45256481 45256613 -44247940 - AluSc SINE Alu -173 136 1 1127 60 0 0 chr17 45256613 45256747 -44247806 - AluSq/x SINE Alu -176 136 3 2059 83 14 17 chr17 45256755 45256910 -44247643 - AluY SINE Alu -20 291 136 2532 47 0 0 chr17 45256910 45257210 -44247343 - AluY SINE Alu -11 300 1 2059 83 14 17 chr17 45257210 45257344 -44247209 - AluY SINE Alu -175 136 3 336 327 49 2 chr17 45257497 45257659 -44246894 + MIR SINE MIR 17 176 -56 217 206 41 27 chr17 45257706 45257779 -44246774 - L2 LINE L2 -194 3078 3005 452 32 0 0 chr17 45257887 45257949 -44246604 + SVA Other Other 1322 1383 -3 480 318 49 15 chr17 45258972 45259177 -44245376 + MIR SINE MIR 34 252 -10 1637 176 16 23 chr17 45259476 45259783 -44244770 + AluJo SINE Alu 1 305 -7 1414 150 105 11 chr17 45259790 45260056 -44244497 + AluJb SINE Alu 1 291 -21 352 253 65 21 chr17 45260056 45260194 -44244359 + MIR3 SINE MIR 35 178 -30 710 96 10 0 chr17 45260645 45260749 -44243804 - L1MB5 LINE L1 0 6174 6070 2452 56 3 0 chr17 45260776 45261080 -44243473 - AluY SINE Alu -6 305 1 1979 107 38 3 chr17 45261313 45261602 -44242951 - AluSq SINE Alu -14 299 1 381 22 0 0 chr17 45262061 45262107 -44242446 + (CA)n Simple_repeat Simple_repeat 2 47 0 288 232 152 40 chr17 45262284 45262383 -44242170 + MIR SINE MIR 44 153 -55 2135 113 3 3 chr17 45262631 45262942 -44241611 + AluSq SINE Alu 1 311 -2 217 219 0 0 chr17 45263927 45263968 -44240585 + (CA)n Simple_repeat Simple_repeat 2 42 0 2349 79 0 0 chr17 45264016 45264321 -44240232 - AluY SINE Alu -6 305 1 477 294 25 25 chr17 45264363 45264523 -44240030 + MIR SINE MIR 2 161 -101 1572 149 84 28 chr17 45265051 45265372 -44239181 - MER44D DNA MER2_type 0 609 1 428 170 252 63 chr17 45265550 45265709 -44238844 - MER5A DNA MER1_type 0 189 1 186 316 72 72 chr17 45267232 45267371 -44237182 + MIR SINE MIR 49 187 -75 1519 237 141 41 chr17 45267565 45268055 -44236498 + MLT1E2 LTR MaLR 2 540 -86 399 195 0 24 chr17 45268096 45268178 -44236375 - MIR SINE MIR -73 189 110 2082 119 7 0 chr17 45268734 45269036 -44235517 - AluSx SINE Alu -6 306 3 2201 96 3 3 chr17 45269857 45270158 -44234395 - AluSx SINE Alu -11 301 1 1322 91 0 0 chr17 45270158 45270333 -44234220 - AluSq SINE Alu -5 308 134 1648 128 0 16 chr17 45270333 45270584 -44233969 - AluSx SINE Alu -12 300 54 819 97 0 32 chr17 45270585 45270709 -44233844 + AluSc SINE Alu 176 295 -14 232 240 274 0 chr17 45270853 45271028 -44233525 + L1ME4a LINE L1 5837 6059 -62 1690 164 7 10 chr17 45271037 45271336 -44233217 - AluJo SINE Alu -14 298 1 227 184 158 66 chr17 45271455 45271531 -44233022 - L2 LINE L2 -3 3269 3187 712 207 24 35 chr17 45271679 45271707 -44232846 - AluJo SINE Alu -144 168 141 1632 143 79 7 chr17 45271707 45271987 -44232566 - AluJb SINE Alu -12 300 1 712 207 24 35 chr17 45271987 45272127 -44232426 - AluJo SINE Alu -171 141 2 2213 81 0 16 chr17 45272133 45272440 -44232113 - AluSc SINE Alu -7 302 1 1876 143 10 19 chr17 45272440 45272753 -44231800 - AluSx SINE Alu -1 311 1 200 176 0 0 chr17 45273468 45273502 -44231051 + CT-rich Low_complexity Low_complexity 2 35 0 2110 101 13 16 chr17 45274262 45274569 -44229984 + AluY SINE Alu 1 306 -5 2355 74 0 0 chr17 45275574 45275870 -44228683 - AluSg SINE Alu -14 296 1 656 234 29 0 chr17 45276076 45276213 -44228340 + MER3 DNA MER1_type 1 141 -68 1068 157 0 17 chr17 45276214 45276386 -44228167 - FRAM SINE Alu -13 163 1 326 167 0 0 chr17 45276390 45276444 -44228109 + MER3 DNA MER1_type 155 208 -1 450 0 0 0 chr17 45276716 45276766 -44227787 + (CA)n Simple_repeat Simple_repeat 2 51 0 1950 88 0 4 chr17 45276818 45277079 -44227474 - AluSg SINE Alu -14 296 37 2164 90 0 17 chr17 45277320 45277621 -44226932 + AluY SINE Alu 1 296 -15 2121 102 24 0 chr17 45277633 45277928 -44226625 + AluSp SINE Alu 1 302 -11 1812 165 0 3 chr17 45278383 45278680 -44225873 - AluJb SINE Alu -16 296 1 2162 88 3 23 chr17 45278684 45278989 -44225564 - AluSq SINE Alu -14 299 1 1596 164 0 58 chr17 45279305 45279442 -44225111 + AluSx SINE Alu 1 144 -168 1751 149 0 4 chr17 45279442 45279717 -44224836 + AluSx SINE Alu 1 274 -38 1596 164 0 58 chr17 45279717 45279889 -44224664 + AluSx SINE Alu 144 292 -20 937 246 12 48 chr17 45279895 45280114 -44224439 + MIR SINE MIR 20 230 -32 1605 168 16 20 chr17 45280114 45280418 -44224135 - AluJb SINE Alu -9 303 1 937 246 12 48 chr17 45280418 45280450 -44224103 + MIR SINE MIR 230 262 0 631 177 33 116 chr17 45280451 45280632 -44223921 + FRAM SINE Alu 1 166 0 347 313 69 77 chr17 45280677 45280910 -44223643 + MIR SINE MIR 20 250 -12 2099 102 0 37 chr17 45281167 45281490 -44223063 + AluSx SINE Alu 1 311 -1 2308 45 0 10 chr17 45281493 45281810 -44222743 + AluY SINE Alu 1 311 0 1237 120 0 0 chr17 45281810 45281985 -44222568 + AluSg/x SINE Alu 132 306 -4 1369 185 3 46 chr17 45282017 45282320 -44222233 + AluJo SINE Alu 1 290 -22 460 238 85 121 chr17 45283005 45283121 -44221432 + L2 LINE L2 2226 2345 -969 1923 108 3 31 chr17 45283121 45283409 -44221144 + AluSx SINE Alu 1 280 -32 414 0 0 0 chr17 45283409 45283455 -44221098 + (CAA)n Simple_repeat Simple_repeat 3 48 0 460 238 85 121 chr17 45283455 45283702 -44220851 + L2 LINE L2 2343 2577 -737 1936 101 0 47 chr17 45283838 45284012 -44220541 - AluSx SINE Alu 0 307 152 1711 100 119 11 chr17 45284012 45284281 -44220272 - AluSp SINE Alu -15 298 1 1936 101 0 47 chr17 45284281 45284424 -44220129 - AluSx SINE Alu -155 152 4 1799 125 3 56 chr17 45284442 45284746 -44219807 - AluSx SINE Alu -24 288 1 1932 142 6 6 chr17 45284783 45285094 -44219459 + AluSx SINE Alu 1 311 -1 634 316 135 28 chr17 45285095 45285450 -44219103 + L2 LINE L2 2916 3308 -5 2144 110 0 7 chr17 45285525 45285824 -44218729 - AluSx SINE Alu -15 297 1 220 291 0 0 chr17 45285982 45286037 -44218516 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1514 187 20 20 chr17 45286038 45286332 -44218221 - AluJo SINE Alu -16 296 3 1979 124 7 0 chr17 45286542 45286833 -44217720 - AluSx SINE Alu -16 296 4 2079 104 10 0 chr17 45286834 45287123 -44217430 - AluSp SINE Alu -15 298 7 189 0 0 0 chr17 45288579 45288600 -44215953 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2265 86 0 0 chr17 45288767 45289068 -44215485 - AluY SINE Alu -9 302 2 2025 107 16 16 chr17 45289326 45289634 -44214919 + AluSp SINE Alu 1 308 -5 846 240 111 98 chr17 45289674 45290153 -44214400 - L3 LINE CR1 -188 1389 905 2000 129 3 0 chr17 45290346 45290648 -44213905 - AluSg SINE Alu -7 303 1 2313 79 3 3 chr17 45290752 45291057 -44213496 - AluSq SINE Alu -8 305 1 2212 89 0 16 chr17 45291179 45291493 -44213060 - AluSc SINE Alu 0 309 1 413 123 27 41 chr17 45291703 45291776 -44212777 + L1PA8 LINE L1 6086 6157 -15 371 77 0 0 chr17 45291776 45291828 -44212725 - Alu SINE Alu -2 298 247 216 0 0 0 chr17 45291830 45291854 -44212699 + (A)n Simple_repeat Simple_repeat 1 24 0 2404 61 0 0 chr17 45291937 45292232 -44212321 + AluY SINE Alu 1 295 -16 788 166 0 58 chr17 45292370 45292509 -44212044 + FLAM_C SINE Alu 1 131 -2 2221 94 3 0 chr17 45293874 45294173 -44210380 - AluSp SINE Alu -13 300 1 373 290 65 15 chr17 45295254 45295454 -44209099 + L1ME LINE L1 5476 5685 -436 288 239 87 11 chr17 45295462 45295554 -44208999 + L1ME LINE L1 5718 5816 -305 2142 77 0 18 chr17 45295662 45295985 -44208568 + AluY SINE Alu 1 318 0 1611 160 3 7 chr17 45296046 45296339 -44208214 + AluSp SINE Alu 1 292 -21 1393 167 3 58 chr17 45296351 45296508 -44208045 - AluJo SINE Alu -20 292 157 2196 90 3 13 chr17 45296508 45296808 -44207745 - AluSp SINE Alu -16 297 1 1393 167 3 58 chr17 45296808 45296944 -44207609 - AluJo SINE Alu -155 157 15 717 161 8 0 chr17 45296991 45297109 -44207444 + FLAM_C SINE Alu 1 119 -24 207 100 0 0 chr17 45297678 45297708 -44206845 + (TA)n Simple_repeat Simple_repeat 2 31 0 1996 125 0 7 chr17 45297708 45297997 -44206556 - AluSx SINE Alu -25 287 1 1119 137 11 0 chr17 45298713 45298888 -44205665 + AluSg/x SINE Alu 133 309 -1 619 133 13 40 chr17 45298901 45299051 -44205502 + GA-rich Low_complexity Low_complexity 3 148 0 192 229 0 0 chr17 45299413 45299448 -44205105 - MIR SINE MIR -10 252 218 1221 93 0 0 chr17 45299505 45299667 -44204886 - AluSg/x SINE Alu -14 298 137 1296 173 24 8 chr17 45299786 45300034 -44204519 + AluJb SINE Alu 37 288 -24 24 32 0 0 chr17 45300034 45300065 -44204488 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr17 45300858 45300886 -44203667 + AT_rich Low_complexity Low_complexity 1 28 0 2110 116 0 10 chr17 45301273 45301574 -44202979 - AluSx SINE Alu -14 298 1 2069 95 3 7 chr17 45301656 45301976 -44202577 - AluSp SINE Alu 0 319 1 663 145 0 109 chr17 45301980 45302030 -44202523 - FLAM_C SINE Alu -179 123 69 2056 118 3 3 chr17 45302030 45302326 -44202227 - AluSx SINE Alu -16 296 1 663 145 0 109 chr17 45302326 45302413 -44202140 - FLAM_C SINE Alu -233 69 1 1765 112 100 0 chr17 45302859 45303149 -44201404 + AluSq SINE Alu 1 316 0 222 280 147 13 chr17 45304133 45304208 -44200345 - L2 LINE L2 -7 3265 3181 1371 78 0 6 chr17 45304257 45304437 -44200116 - AluSp SINE Alu -133 180 2 1683 142 18 21 chr17 45304464 45304746 -44199807 + AluJo SINE Alu 1 281 -31 412 160 19 66 chr17 45304753 45304859 -44199694 + FLAM_A SINE Alu 42 142 0 1843 145 50 0 chr17 45307100 45307397 -44197156 - AluSx SINE Alu 0 312 1 245 266 78 0 chr17 45307460 45307524 -44197029 - L2 LINE L2 -5 3308 3240 27 0 0 0 chr17 45307797 45307824 -44196729 + AT_rich Low_complexity Low_complexity 1 27 0 2281 87 6 19 chr17 45307799 45307973 -44196580 - AluSx SINE Alu -5 307 137 2463 81 0 0 chr17 45307973 45308271 -44196282 - AluY SINE Alu -13 298 1 2281 87 6 19 chr17 45308271 45308407 -44196146 - AluSx SINE Alu -175 137 1 879 111 8 0 chr17 45309199 45309325 -44195228 + AluSg/x SINE Alu 178 304 -6 390 42 0 0 chr17 45310042 45310090 -44194463 + (CA)n Simple_repeat Simple_repeat 1 48 0 210 227 23 0 chr17 45310232 45310276 -44194277 + L2 LINE L2 3222 3266 -6 679 282 93 34 chr17 45310964 45311319 -44193234 + L1ME4a LINE L1 5471 5846 -275 2385 103 3 0 chr17 45311322 45311633 -44192920 + AluSp SINE Alu 1 312 -1 1213 200 19 74 chr17 45311682 45311992 -44192561 - AluJb SINE Alu -8 294 2 1139 146 39 10 chr17 45312091 45312316 -44192237 - L1MB3 LINE L1 -34 6149 5936 312 216 0 0 chr17 45312325 45312376 -44192177 - MER66A LTR ERV1 -141 337 287 657 164 0 0 chr17 45312378 45312482 -44192071 - L1MB3 LINE L1 -232 5948 5845 1997 132 0 33 chr17 45312972 45313275 -44191278 + AluSx SINE Alu 1 293 -19 972 102 0 0 chr17 45313487 45313614 -44190939 - AluSp/q SINE Alu -11 302 176 1809 169 13 7 chr17 45313669 45313971 -44190582 + AluJb SINE Alu 1 304 -8 225 272 18 12 chr17 45314134 45314216 -44190337 + MIR SINE MIR 64 148 -62 2033 116 0 4 chr17 45314313 45314590 -44189963 - AluSx SINE Alu -11 301 26 215 150 0 25 chr17 45314659 45314699 -44189854 + (TG)n Simple_repeat Simple_repeat 1 39 0 1846 158 3 3 chr17 45319240 45319559 -44184994 + AluJb SINE Alu 1 319 0 2287 116 0 0 chr17 45320036 45320347 -44184206 + AluSx SINE Alu 2 312 0 1221 129 0 0 chr17 45320361 45320531 -44184022 + AluSc SINE Alu 130 299 -10 324 186 114 0 chr17 45320831 45320901 -44183652 + MIR3 SINE MIR 125 202 -6 732 128 64 86 chr17 45320909 45321096 -44183457 + L1PA15 LINE L1 5974 6156 -9 224 157 39 59 chr17 45321315 45321366 -44183187 - L2 LINE L2 -8 3264 3215 832 153 15 8 chr17 45321412 45321543 -44183010 + AluSq/x SINE Alu 2 133 -179 798 259 47 4 chr17 45321555 45321787 -44182766 + MIR SINE MIR 20 261 -1 1606 154 63 21 chr17 45321971 45322257 -44182296 - AluJo SINE Alu -14 298 1 39 18 0 18 chr17 45322278 45322310 -44182243 + AT_rich Low_complexity Low_complexity 1 33 -23 2012 115 10 34 chr17 45322310 45322606 -44181947 - AluSx SINE Alu -23 289 1 39 18 0 18 chr17 45322606 45322630 -44181923 + AT_rich Low_complexity Low_complexity 33 56 0 679 205 0 0 chr17 45322630 45322747 -44181806 - FLAM_C SINE Alu -25 118 2 2304 76 7 20 chr17 45322760 45323061 -44181492 - AluSp SINE Alu -15 298 2 2263 113 3 3 chr17 45323199 45323510 -44181043 - AluSp SINE Alu -2 311 1 752 145 24 8 chr17 45323988 45324112 -44180441 + FLAM_C SINE Alu 2 127 -16 1131 129 0 35 chr17 45324278 45324449 -44180104 - AluSg/x SINE Alu -15 297 133 849 91 34 17 chr17 45324464 45324640 -44179913 + (TA)n Simple_repeat Simple_repeat 2 180 0 2240 99 7 0 chr17 45324676 45324968 -44179585 - AluSx SINE Alu -18 294 1 1972 156 0 0 chr17 45325130 45325432 -44179121 - AluSg SINE Alu -8 302 1 2201 122 3 0 chr17 45325443 45325739 -44178814 - AluSx SINE Alu -15 297 1 1218 172 68 68 chr17 45325845 45326008 -44178545 - AluJo SINE Alu -16 296 134 2191 92 0 3 chr17 45326008 45326292 -44178261 - AluY SINE Alu -12 299 17 2309 101 0 0 chr17 45326295 45326592 -44177961 - AluSc SINE Alu -12 297 1 1591 186 28 7 chr17 45326594 45326884 -44177669 - AluJo SINE Alu -16 296 1 1218 172 68 68 chr17 45326884 45327009 -44177544 - AluJo SINE Alu -180 132 1 2389 95 0 0 chr17 45327123 45327427 -44177126 + AluSx SINE Alu 1 304 -8 609 206 28 0 chr17 45327451 45327558 -44176995 - FLAM_A SINE Alu -32 110 1 1596 99 0 0 chr17 45327763 45327964 -44176589 + AluSx SINE Alu 1 201 -111 335 96 0 0 chr17 45327964 45328045 -44176508 + AluSx SINE Alu 250 330 0 23 33 0 0 chr17 45328329 45328359 -44176194 + AT_rich Low_complexity Low_complexity 1 30 0 719 204 35 6 chr17 45328468 45328640 -44175913 - MER104 DNA MER2_type -3 177 1 1598 208 0 10 chr17 45329176 45329479 -44175074 - AluJo SINE Alu -12 300 1 313 252 145 38 chr17 45329635 45329766 -44174787 - L2 LINE L2 0 3313 3169 1869 128 43 4 chr17 45329803 45330084 -44174469 + AluJb SINE Alu 18 309 -3 1007 193 0 103 chr17 45330842 45331001 -44173552 + L1M4 LINE L1 4730 4904 -1242 2555 53 3 0 chr17 45331001 45331301 -44173252 - AluY SINE Alu -10 301 1 1851 130 60 17 chr17 45331307 45331606 -44172947 - AluSx SINE Alu 0 312 1 1007 193 0 103 chr17 45331606 45331750 -44172803 + L1M4 LINE L1 4909 5008 -1138 1814 146 35 3 chr17 45332001 45332288 -44172265 + AluSx SINE Alu 1 296 -16 2002 112 30 16 chr17 45332367 45332671 -44171882 + AluSx SINE Alu 1 308 -4 2059 80 84 0 chr17 45332671 45332957 -44171596 + AluSp SINE Alu 1 308 0 249 119 0 0 chr17 45332969 45333011 -44171542 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 1204 188 5 13 chr17 45333011 45333235 -44171318 - AluJb SINE Alu -90 222 1 2441 75 0 0 chr17 45333837 45334132 -44170421 - AluY SINE Alu -16 295 1 1796 183 3 7 chr17 45334243 45334543 -44170010 + AluJb SINE Alu 1 299 -13 817 141 25 0 chr17 45334631 45334752 -44169801 + AluSq/x SINE Alu 1 124 -188 2411 97 0 0 chr17 45334757 45335055 -44169498 + AluSx SINE Alu 1 298 -14 2271 116 0 0 chr17 45335176 45335477 -44169076 + AluSx SINE Alu 1 301 -11 2419 73 0 3 chr17 45335478 45335810 -44168743 + AluY SINE Alu 1 311 0 2268 103 7 0 chr17 45336033 45336324 -44168229 - AluSg SINE Alu -17 293 1 873 223 16 0 chr17 45336377 45336565 -44167988 + AluJo SINE Alu 109 299 -13 241 239 15 15 chr17 45336565 45336632 -44167921 + (TA)n Simple_repeat Simple_repeat 2 68 0 2290 96 7 0 chr17 45336738 45337041 -44167512 - AluSp SINE Alu -8 305 1 1910 132 0 7 chr17 45337301 45337605 -44166948 - AluSc SINE Alu 0 302 1 2104 104 35 3 chr17 45337739 45338026 -44166527 + AluSq SINE Alu 1 296 -17 873 194 0 0 chr17 45338026 45338170 -44166383 - FRAM SINE Alu -32 144 1 392 86 86 14 chr17 45338329 45338399 -44166154 - AluJ/FRAM SINE Alu -4 298 224 2368 98 0 0 chr17 45339160 45339455 -44165098 + AluSg SINE Alu 1 295 -15 21 0 0 0 chr17 45339760 45339781 -44164772 + AT_rich Low_complexity Low_complexity 1 21 0 198 224 318 0 chr17 45339844 45339929 -44164624 - L2 LINE L2 -5 3308 3197 377 164 116 68 chr17 45340162 45340308 -44164245 - L1MC5 LINE L1 -39 7922 7770 712 167 114 0 chr17 45340318 45340450 -44164103 - FRAM SINE Alu -26 150 4 2089 116 7 3 chr17 45340463 45340756 -44163797 - AluSq SINE Alu -19 294 1 840 188 101 61 chr17 45340758 45341035 -44163518 - L1MC5 LINE L1 -444 7517 7230 1920 158 0 7 chr17 45341097 45341394 -44163159 + AluSx SINE Alu 1 295 -17 2127 117 3 13 chr17 45341397 45341704 -44162849 + AluSg SINE Alu 1 304 -6 798 278 92 40 chr17 45341797 45342306 -44162247 - L2 LINE L2 -12 3301 2765 1180 109 0 12 chr17 45342309 45342474 -44162079 - AluSg/x SINE Alu -9 303 141 342 136 10 5 chr17 45342474 45342541 -44162012 - Alu SINE Alu -250 50 6 785 177 0 0 chr17 45342550 45342674 -44161879 - FLAM_C SINE Alu -9 124 1 1792 147 41 20 chr17 45342699 45342991 -44161562 - AluSx SINE Alu -14 298 1 483 110 330 0 chr17 45343123 45343223 -44161330 + FLAM_C SINE Alu 1 133 0 244 290 97 16 chr17 45343312 45343436 -44161117 + MIR3 SINE MIR 2 135 -73 2536 53 0 0 chr17 45344421 45344722 -44159831 + AluY SINE Alu 1 301 -10 1905 89 37 22 chr17 45344731 45345002 -44159551 + AluSg SINE Alu 1 275 -35 2304 81 0 0 chr17 45345031 45345339 -44159214 + AluY SINE Alu 1 308 0 2315 101 7 0 chr17 45345342 45345650 -44158903 + AluSp SINE Alu 3 312 -1 638 260 116 29 chr17 45346277 45346554 -44157999 - L2 LINE L2 -2 3311 3011 1640 157 17 27 chr17 45346563 45346702 -44157851 + AluJb SINE Alu 1 140 -172 2332 98 0 35 chr17 45346702 45347019 -44157534 + AluY SINE Alu 1 306 -5 1640 157 17 27 chr17 45347019 45347173 -44157380 + AluJb SINE Alu 140 291 -21 2157 107 20 0 chr17 45347287 45347585 -44156968 - AluSc SINE Alu -5 304 1 270 0 0 0 chr17 45348685 45348715 -44155838 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1675 58 53 0 chr17 45348719 45348927 -44155626 - AluSg SINE Alu -37 273 55 4766 136 92 116 chr17 45350580 45351680 -44152873 + pTR5 LTR ERV1 714 1965 -473 2307 101 0 3 chr17 45351680 45351988 -44152565 + AluY SINE Alu 2 308 -3 4766 136 92 116 chr17 45351988 45352451 -44152102 + pTR5 LTR ERV1 1965 2438 0 894 99 0 57 chr17 45352755 45352896 -44151657 - FLAM_C SINE Alu 0 133 1 2342 84 0 16 chr17 45353403 45353711 -44150842 - AluY SINE Alu -7 304 2 733 145 16 16 chr17 45354128 45354252 -44150301 - FLAM_C SINE Alu -9 124 1 2087 141 3 0 chr17 45354254 45354552 -44150001 - AluSx SINE Alu -13 299 1 21 0 0 0 chr17 45354554 45354575 -44149978 + AT_rich Low_complexity Low_complexity 1 21 0 390 279 48 26 chr17 45354612 45354779 -44149774 - MIR SINE MIR -63 145 24 2481 91 3 0 chr17 45355128 45355436 -44149117 + AluSc SINE Alu 1 309 0 606 219 73 0 chr17 45355613 45355736 -44148817 + AluJb SINE Alu 4 135 -177 1410 182 45 17 chr17 45355736 45356027 -44148526 + AluJo SINE Alu 1 299 -13 2105 95 0 15 chr17 45356033 45356307 -44148246 + AluSq SINE Alu 1 270 -43 2287 112 3 0 chr17 45356477 45356780 -44147773 + AluSx SINE Alu 1 304 -8 364 279 88 28 chr17 45356860 45357055 -44147498 + MIR3 SINE MIR 2 212 -50 2293 81 0 0 chr17 45358089 45358384 -44146169 - AluY SINE Alu -4 307 13 2012 85 16 46 chr17 45358797 45358981 -44145572 - AluSp SINE Alu -17 296 123 2448 51 0 0 chr17 45358981 45359276 -44145277 - AluY SINE Alu -15 296 2 2012 85 16 46 chr17 45359276 45359396 -44145157 - AluSp SINE Alu -190 123 1 25 0 0 0 chr17 45359498 45359523 -44145030 + AT_rich Low_complexity Low_complexity 1 25 0 689 138 18 0 chr17 45359873 45359982 -44144571 - AluSq/x SINE Alu -200 112 2 624 80 8 104 chr17 45360091 45360216 -44144337 - L1MA9 LINE L1 -33 6279 6167 1998 130 0 0 chr17 45360226 45360525 -44144028 - AluSx SINE Alu -12 300 2 838 178 0 0 chr17 45360526 45360655 -44143898 - AluJo/FLAM SINE Alu -173 129 1 2220 98 0 0 chr17 45360685 45360980 -44143573 - AluSc SINE Alu -13 296 2 725 247 0 7 chr17 45360980 45361126 -44143427 - AluJb SINE Alu -32 280 136 1724 174 20 0 chr17 45361128 45361422 -44143131 - AluSx SINE Alu -12 300 1 21 36 0 0 chr17 45361437 45361465 -44143088 + AT_rich Low_complexity Low_complexity 1 28 0 644 144 13 157 chr17 45361503 45361656 -44142897 - AluJb SINE Alu -23 289 159 252 202 169 45 chr17 45361785 45361874 -44142679 + MIR3 SINE MIR 94 193 -15 1170 81 17 12 chr17 45361874 45362047 -44142506 + AluSp SINE Alu 124 297 -16 1779 147 125 20 chr17 45362072 45362479 -44142074 - LTR7 LTR ERV1 0 450 1 1111 77 13 26 chr17 45362819 45362839 -44141714 - AluSq SINE Alu -159 154 135 1815 105 49 56 chr17 45362839 45363144 -44141409 - AluY SINE Alu -8 303 1 1111 77 13 26 chr17 45363144 45363279 -44141274 - AluSq SINE Alu -178 135 1 197 301 71 96 chr17 45363494 45363533 -44141020 + L2 LINE L2 2037 2075 -1239 2098 113 0 3 chr17 45363533 45363833 -44140720 - AluSx SINE Alu -12 300 2 197 301 71 96 chr17 45363833 45363857 -44140696 + L2 LINE L2 2075 2098 -1216 1615 167 35 0 chr17 45363857 45364144 -44140409 - AluJb SINE Alu -15 297 1 197 301 71 96 chr17 45364144 45364318 -44140235 + L2 LINE L2 2098 2269 -1045 548 250 0 0 chr17 45364561 45364673 -44139880 - MER81 DNA DNA -1 113 2 921 193 0 6 chr17 45365047 45365213 -44139340 + AluSx SINE Alu 7 171 -141 207 0 0 0 chr17 45365231 45365254 -44139299 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1559 189 0 20 chr17 45365352 45365654 -44138899 + AluJo SINE Alu 1 296 -16 593 225 104 23 chr17 45365688 45365861 -44138692 - MIR SINE MIR -28 234 48 2057 122 0 13 chr17 45366183 45366317 -44138236 + AluSg SINE Alu 1 135 -175 2227 86 0 29 chr17 45366317 45366630 -44137923 + AluY SINE Alu 1 304 -7 2057 122 0 13 chr17 45366630 45366807 -44137746 + AluSg SINE Alu 135 308 -2 369 143 0 29 chr17 45366890 45366960 -44137593 - L1MC5 LINE L1 -523 7438 7371 3485 84 19 13 chr17 45366960 45367434 -44137119 + LTR15 LTR ERV1 1 477 -16 390 204 131 73 chr17 45367450 45367587 -44136966 - L1MC5 LINE L1 -587 7374 7230 1921 132 3 7 chr17 45367649 45367945 -44136608 + AluSx SINE Alu 1 295 -17 2080 99 0 0 chr17 45367948 45368232 -44136321 + AluSg SINE Alu 1 284 -26 355 138 0 0 chr17 45368245 45368303 -44136250 + Alu SINE Alu 244 301 -1 936 277 96 41 chr17 45368391 45368910 -44135643 - L2 LINE L2 0 3313 2765 1122 124 0 0 chr17 45368913 45369074 -44135479 - AluSg/x SINE Alu -11 301 141 385 118 4 4 chr17 45369074 45369142 -44135411 - Alu SINE Alu -253 50 1 732 205 0 0 chr17 45369151 45369273 -44135280 - FLAM_C SINE Alu -9 124 3 1403 177 42 38 chr17 45369279 45369567 -44134986 - AluSx SINE Alu -23 289 1 1958 158 0 0 chr17 45369677 45369988 -44134565 - AluSx SINE Alu -1 311 1 445 150 170 0 chr17 45369992 45370092 -44134461 - MIR SINE MIR -64 198 82 202 318 0 30 chr17 45370288 45370354 -44134199 - MIR SINE MIR -171 91 28 269 195 0 130 chr17 45370393 45370470 -44134083 + MIR SINE MIR 48 114 -148 1289 93 6 6 chr17 45370472 45370655 -44133898 - AluSc SINE Alu 0 309 127 2298 75 0 28 chr17 45370656 45370976 -44133577 - AluY SINE Alu 0 311 1 266 256 122 11 chr17 45370978 45371068 -44133485 + MIR SINE MIR 104 203 -59 182 307 182 11 chr17 45371269 45371357 -44133196 + MER5A DNA MER1_type 68 170 -19 2171 123 0 0 chr17 45371530 45371839 -44132714 - AluSx SINE Alu -3 309 1 415 271 8 8 chr17 45372945 45373074 -44131479 + MLT1H LTR MaLR 95 223 -326 756 144 16 0 chr17 45373917 45374042 -44130511 + FLAM_C SINE Alu 2 128 -5 7173 56 9 2 chr17 45374073 45375346 -44129207 + L1PA5 LINE L1 4875 6154 0 1760 138 25 4 chr17 45375504 45375800 -44128753 + AluSx SINE Alu 1 302 0 2093 123 10 0 chr17 45375810 45376119 -44128434 + AluSq SINE Alu 1 312 -1 224 377 0 0 chr17 45376127 45376204 -44128349 + L2 LINE L2 353 429 -2885 285 197 0 16 chr17 45376904 45376965 -44127588 + LTR33A LTR ERVL 443 502 -21 501 190 0 0 chr17 45376989 45377068 -44127485 + MER21B LTR ERV1 12 90 -773 21 0 0 0 chr17 45377083 45377104 -44127449 + AT_rich Low_complexity Low_complexity 1 21 0 2236 136 0 27 chr17 45377139 45377267 -44127286 - L1PA14 LINE L1 0 6161 6031 2056 99 27 0 chr17 45377267 45377559 -44126994 - AluSg SINE Alu -10 300 1 2236 136 0 27 chr17 45377559 45377799 -44126754 - L1PA14 LINE L1 -130 6031 5803 1838 234 56 10 chr17 45377814 45378416 -44126137 + MER21B LTR ERV1 22 682 -181 183 324 139 52 chr17 45378429 45378716 -44125837 + L2 LINE L2 2924 3235 -37 994 138 0 12 chr17 45379226 45379386 -44125167 + FRAM SINE Alu 1 156 -20 28 29 0 0 chr17 45379404 45379439 -44125114 + AT_rich Low_complexity Low_complexity 1 35 0 1551 66 15 0 chr17 45379441 45379638 -44124915 + AluY SINE Alu 3 202 -109 1586 122 0 8 chr17 45379743 45379980 -44124573 - AluSx SINE Alu -77 235 1 218 266 38 51 chr17 45380047 45380126 -44124427 + L2 LINE L2 3175 3252 -20 345 317 74 45 chr17 45380234 45380477 -44124076 + MIR SINE MIR 13 262 0 1202 131 0 0 chr17 45380508 45380684 -44123869 - AluSp SINE Alu -11 302 127 180 0 0 0 chr17 45380684 45380704 -44123849 + (TG)n Simple_repeat Simple_repeat 2 21 0 306 197 56 14 chr17 45380708 45380779 -44123774 + L1MC4 LINE L1 1995 2068 -4358 * 382 223 9 23 chr17 45380747 45380855 -44123698 + L1MC4 LINE L1 1995 6983 -1339 207 0 0 0 chr17 45380855 45380878 -44123675 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 886 113 8 0 chr17 45380883 45381007 -44123546 - AluSp SINE Alu -188 125 1 26 30 0 0 chr17 45381669 45381702 -44122851 + AT_rich Low_complexity Low_complexity 1 33 0 2247 74 0 10 chr17 45381705 45382004 -44122549 + AluY SINE Alu 1 296 -15 749 125 0 0 chr17 45382508 45382612 -44121941 + AluSq/x SINE Alu 4 107 -206 810 143 0 15 chr17 45383076 45383209 -44121344 + AluSg/x SINE Alu 168 298 -12 2249 71 10 3 chr17 45383210 45383507 -44121046 + AluSp SINE Alu 3 301 -12 714 284 92 21 chr17 45384156 45384438 -44120115 - L2 LINE L2 -1 3312 3011 1462 155 66 4 chr17 45384447 45384564 -44119989 + AluJb SINE Alu 1 109 -203 195 69 0 0 chr17 45384564 45384593 -44119960 + (CA)n Simple_repeat Simple_repeat 2 30 0 1462 155 66 4 chr17 45384593 45384746 -44119807 + AluJb SINE Alu 109 288 -24 284 95 0 0 chr17 45384747 45384789 -44119764 + L1ME3 LINE L1 6121 6162 0 2013 68 18 35 chr17 45384795 45385353 -44119200 + SVA Other Other 499 1386 0 1529 74 0 15 chr17 45385536 45385739 -44118814 - AluY SINE Alu -13 298 99 1850 180 66 59 chr17 45385739 45386195 -44118358 - LTR2B LTR ERV1 0 490 32 40456 58 30 21 chr17 45386214 45391381 -44113172 - Harlequin LTR ERV1 0 6896 1678 384 42 0 0 chr17 45391381 45391429 -44113124 + L1PA3 LINE L1 6103 6150 -5 40456 58 30 21 chr17 45391429 45391540 -44113013 - Harlequin LTR ERV1 -5218 1678 1570 7328 76 20 98 chr17 45391523 45391629 -44112924 - Harlequin LTR ERV1 -5792 1104 991 * 189 0 0 0 chr17 45391629 45391650 -44112903 + (TG)n Simple_repeat Simple_repeat 2 22 0 7328 76 20 98 chr17 45391650 45392740 -44111813 - Harlequin LTR ERV1 -5905 991 1 1870 189 69 32 chr17 45392741 45393174 -44111379 - LTR2B LTR ERV1 -10 480 32 769 79 0 0 chr17 45393193 45393294 -44111259 - AluY SINE Alu -209 102 2 2117 96 3 7 chr17 45393850 45394153 -44110400 + AluSp SINE Alu 1 302 -11 2112 79 35 0 chr17 45394670 45394960 -44109593 - AluSg SINE Alu -9 301 2 709 146 0 62 chr17 45397307 45397437 -44107116 - FLAM_C SINE Alu -11 122 1 2382 68 0 3 chr17 45398313 45398620 -44105933 - AluY SINE Alu -5 306 1 763 137 16 16 chr17 45398653 45398777 -44105776 - FLAM_C SINE Alu -9 124 1 1948 137 13 0 chr17 45398779 45399079 -44105474 - AluSx SINE Alu -8 304 1 327 332 72 27 chr17 45399140 45399325 -44105228 - MIR3 SINE MIR -63 145 3 803 182 105 42 chr17 45399511 45399797 -44104756 + L1MC5 LINE L1 7624 7927 -34 2083 99 0 7 chr17 45399811 45400104 -44104449 + AluY SINE Alu 3 293 -18 28 0 0 0 chr17 45400107 45400135 -44104418 + AT_rich Low_complexity Low_complexity 1 28 0 2019 96 22 38 chr17 45400308 45400621 -44103932 + AluY SINE Alu 1 308 -3 281 275 25 12 chr17 45400806 45400886 -44103667 + L2 LINE L2 3190 3270 -43 360 250 156 0 chr17 45401118 45401214 -44103339 + L2 LINE L2 3198 3308 -5 268 197 0 0 chr17 45402233 45402299 -44102254 - L1MA9 LINE L1 -19 6293 6228 1944 133 76 3 chr17 45402299 45402615 -44101938 - MER7A DNA MER2_type 0 346 10 297 222 56 133 chr17 45402615 45402795 -44101758 - L1MA9 LINE L1 -93 6219 6054 26 0 0 0 chr17 45402851 45402877 -44101676 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr17 45402974 45403004 -44101549 + AT_rich Low_complexity Low_complexity 1 30 0 1737 168 3 3 chr17 45403011 45403309 -44101244 - AluJb SINE Alu -14 298 1 1783 153 3 7 chr17 45404197 45404497 -44100056 + AluJb SINE Alu 1 299 -13 456 279 93 110 chr17 45404497 45404781 -44099772 - L1ME LINE L1 -371 5750 5462 441 0 0 0 chr17 45404781 45404830 -44099723 + (CA)n Simple_repeat Simple_repeat 2 50 0 456 279 93 110 chr17 45404830 45405025 -44099528 - L1ME LINE L1 -659 5462 5265 771 143 0 34 chr17 45405440 45405559 -44098994 - FLAM_C SINE Alu -27 116 2 1244 145 0 0 chr17 45405575 45405768 -44098785 - AluSg/x SINE Alu -2 308 116 5823 50 7 50 chr17 45406317 45406977 -44097576 - L1PA7 LINE L1 -1 6153 5466 2430 84 0 7 chr17 45406977 45407276 -44097277 - AluY SINE Alu -14 297 1 5823 50 7 50 chr17 45407276 45407299 -44097254 - L1PA7 LINE L1 -688 5466 5444 2291 112 0 3 chr17 45407299 45407604 -44096949 - AluSg SINE Alu -6 304 1 5823 50 7 50 chr17 45407604 45407677 -44096876 - L1PA7 LINE L1 -710 5444 5369 2542 84 0 0 chr17 45407677 45407986 -44096567 - AluY SINE Alu -2 309 1 5823 50 7 50 chr17 45407986 45408535 -44096018 - L1PA7 LINE L1 -785 5369 4875 258 51 0 51 chr17 45409863 45409902 -44094651 - Alu SINE Alu -252 48 12 182 267 0 0 chr17 45410040 45410085 -44094468 + MIR SINE MIR 108 152 -110 699 209 0 0 chr17 45410294 45410428 -44094125 - AluJb SINE Alu -45 267 134 186 43 0 0 chr17 45410429 45410452 -44094101 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2665 34 0 0 chr17 45410462 45410754 -44093799 - AluY SINE Alu -19 292 1 1301 200 117 19 chr17 45410765 45411030 -44093523 - AluJo SINE Alu -21 291 1 2213 118 53 6 chr17 45411087 45411443 -44093110 + MER39B LTR ERV1 6 378 -275 483 188 0 0 chr17 45411443 45411528 -44093025 + AluJ/FLAM SINE Alu 2 86 -226 2562 60 0 3 chr17 45411672 45411974 -44092579 - AluY SINE Alu -10 301 1 757 206 94 0 chr17 45412019 45412179 -44092374 + FAM SINE Alu 1 175 0 1374 184 14 11 chr17 45412180 45412463 -44092090 + MER39B LTR ERV1 366 649 -4 820 180 0 0 chr17 45412489 45412628 -44091925 + FLAM_C SINE Alu 1 139 -4 22 0 0 0 chr17 45412771 45412793 -44091760 + AT_rich Low_complexity Low_complexity 1 22 0 660 251 69 5 chr17 45412794 45412997 -44091556 - L2 LINE L2 0 3313 3098 1159 124 0 28 chr17 45413122 45413299 -44091254 - AluSg/x SINE Alu -4 308 137 2050 134 7 7 chr17 45413299 45413606 -44090947 - AluSq SINE Alu -6 307 1 1320 131 0 185 chr17 45413612 45413979 -44090574 - AluJb SINE Alu -11 301 3 326 215 172 0 chr17 45414168 45414261 -44090292 + MIR SINE MIR 29 137 -125 229 284 81 0 chr17 45414454 45414528 -44090025 - MIR SINE MIR -90 172 93 546 237 23 8 chr17 45415465 45415596 -44088957 - FRAM SINE Alu -6 170 38 2052 113 6 52 chr17 45415718 45416045 -44088508 - AluSx SINE Alu 0 312 1 2437 92 0 13 chr17 45416410 45416725 -44087828 - AluSp SINE Alu -2 311 1 461 240 201 59 chr17 45416826 45417184 -44087369 + L2 LINE L2 560 968 -2346 184 279 190 25 chr17 45417188 45417267 -44087286 + L2 LINE L2 1128 1219 -2095 2548 87 28 8 chr17 45417327 45417684 -44086869 - THE1B LTR MaLR 0 364 1 7932 102 6 48 chr17 45417692 45417861 -44086692 - THE1B-int LTR MaLR -9 1571 1397 2381 103 0 7 chr17 45417861 45418163 -44086390 + AluSx SINE Alu 1 300 -12 7932 102 6 48 chr17 45418163 45418301 -44086252 - THE1B-int LTR MaLR -183 1397 1255 2389 101 0 10 chr17 45418301 45418608 -44085945 - AluSx SINE Alu -7 305 2 7932 102 6 48 chr17 45418608 45419393 -44085160 - THE1B-int LTR MaLR -325 1255 439 2380 109 0 0 chr17 45419393 45419697 -44084856 - AluSc SINE Alu -5 304 1 7932 102 6 48 chr17 45419697 45419762 -44084791 - THE1B-int LTR MaLR -1141 439 373 1924 144 17 0 chr17 45419762 45420053 -44084500 - AluSg SINE Alu -14 296 1 7932 102 6 48 chr17 45420053 45420078 -44084475 - THE1B-int LTR MaLR -1207 373 349 2307 100 3 13 chr17 45420078 45420388 -44084165 + AluSg SINE Alu 1 307 -3 1829 162 23 3 chr17 45420393 45420696 -44083857 + AluSq SINE Alu 3 311 -2 7932 102 6 48 chr17 45420696 45420758 -44083795 - THE1B-int LTR MaLR -1148 432 369 2245 114 10 0 chr17 45420766 45421073 -44083480 + AluSp SINE Alu 2 311 -2 1983 124 30 0 chr17 45421090 45421388 -44083165 + AluSp SINE Alu 6 312 -1 2175 105 0 10 chr17 45421434 45421747 -44082806 + AluSg SINE Alu 1 310 0 2108 95 3 20 chr17 45421758 45422064 -44082489 + AluSp SINE Alu 9 309 -4 468 252 16 8 chr17 45422073 45422200 -44082353 - MER33 DNA MER1_type -194 130 3 4881 163 19 44 chr17 45422358 45423390 -44081163 - LTR13 LTR ERVK 0 1007 1 318 178 85 119 chr17 45423393 45423511 -44081042 - MER96B DNA MER1_type? -303 114 1 257 291 28 104 chr17 45423838 45424195 -44080358 - L2 LINE L2 -1 3271 2942 848 82 8 16 chr17 45424752 45424874 -44079679 - AluSp SINE Alu -188 125 5 2422 71 3 3 chr17 45424878 45425173 -44079380 - AluY SINE Alu -12 299 5 2242 97 20 3 chr17 45425177 45425475 -44079078 - AluSx SINE Alu -8 304 2 1096 171 11 0 chr17 45425482 45425663 -44078890 - AluSg/x SINE Alu -13 297 115 1566 155 90 11 chr17 45425896 45426174 -44078379 - AluJb SINE Alu -12 300 1 278 313 42 14 chr17 45426226 45426387 -44078166 - MIR3 SINE MIR -62 146 5 1554 233 0 7 chr17 45426772 45427073 -44077480 + AluJo SINE Alu 1 299 -13 2378 82 3 7 chr17 45427521 45427824 -44076729 - AluY SINE Alu -9 302 1 2371 84 0 10 chr17 45427824 45428121 -44076432 - AluSg SINE Alu -12 298 4 2460 65 0 26 chr17 45428161 45428471 -44076082 - AluY SINE Alu -9 302 1 396 201 104 14 chr17 45429907 45430051 -44074502 + L1MD3 LINE L1 7838 7994 -1 1799 148 3 57 chr17 45431025 45431173 -44073380 + AluJb SINE Alu 2 126 -186 2486 83 3 0 chr17 45431173 45431475 -44073078 + AluSp SINE Alu 1 303 -10 1799 148 3 57 chr17 45431475 45431643 -44072910 + AluJb SINE Alu 126 301 -11 2447 98 0 0 chr17 45431645 45431952 -44072601 + AluSg1 SINE Alu 1 307 -2 2486 74 0 0 chr17 45433039 45433337 -44071216 + AluY SINE Alu 1 298 -13 2176 94 6 50 chr17 45433671 45433989 -44070564 + AluSp SINE Alu 1 304 -9 2285 104 3 0 chr17 45434173 45434470 -44070083 + AluSg SINE Alu 1 298 -12 2290 91 0 7 chr17 45434480 45434766 -44069787 + AluY SINE Alu 1 284 -27 233 233 70 23 chr17 45434802 45434888 -44069665 + L1ME4a LINE L1 5946 6035 -86 1452 213 45 3 chr17 45434888 45435174 -44069379 - AluJb SINE Alu -14 298 1 2205 89 14 7 chr17 45435182 45435474 -44069079 - AluY SINE Alu -17 294 1 288 70 0 0 chr17 45436045 45436088 -44068465 + (GGA)n Simple_repeat Simple_repeat 1 43 0 2003 166 0 0 chr17 45436667 45436968 -44067585 - AluJb SINE Alu -11 301 1 2315 93 0 7 chr17 45437697 45437997 -44066556 + AluSg SINE Alu 1 298 -12 240 317 102 24 chr17 45438080 45438247 -44066306 + MIR SINE MIR 12 191 -71 1878 111 12 0 chr17 45438712 45438964 -44065589 + AluSg SINE Alu 38 292 -18 2468 77 0 3 chr17 45439738 45440037 -44064516 - AluY SINE Alu -13 298 1 245 163 0 0 chr17 45440039 45440082 -44064471 + MIR SINE MIR 65 107 -155 1806 168 0 29 chr17 45440187 45440334 -44064219 + AluJo SINE Alu 1 151 -161 2340 84 3 3 chr17 45440334 45440631 -44063922 + AluSc SINE Alu 1 297 -12 1806 168 0 29 chr17 45440631 45440793 -44063760 + AluJo SINE Alu 151 301 -11 2437 92 0 0 chr17 45440872 45441164 -44063389 + AluSg SINE Alu 1 292 -18 306 331 65 13 chr17 45441200 45441354 -44063199 - L2 LINE L2 -206 3066 2905 1850 181 0 3 chr17 45441393 45441696 -44062857 + AluJb SINE Alu 1 302 -10 2505 85 7 0 chr17 45441696 45442001 -44062552 + AluSg SINE Alu 1 307 -3 365 294 233 45 chr17 45442003 45442174 -44062379 - L2 LINE L2 -495 2819 2681 2435 88 3 0 chr17 45442174 45442471 -44062082 + AluSg SINE Alu 1 298 -12 365 294 233 45 chr17 45442471 45442579 -44061974 - L2 LINE L2 -633 2681 2595 1953 148 0 7 chr17 45442579 45442862 -44061691 + AluJb SINE Alu 1 281 -31 365 294 233 45 chr17 45442862 45443022 -44061531 - L2 LINE L2 -719 2595 2466 1281 168 90 66 chr17 45443022 45443161 -44061392 + MER2 DNA MER2_type 2 136 -208 1536 199 14 20 chr17 45443161 45443458 -44061095 - AluJo SINE Alu -17 295 1 1281 168 90 66 chr17 45443458 45443651 -44060902 + MER2 DNA MER2_type 136 342 -2 365 294 233 45 chr17 45443651 45443960 -44060593 - L2 LINE L2 -848 2466 1928 237 143 14 100 chr17 45444409 45444479 -44060074 + MIR SINE MIR 96 159 -103 1960 169 0 3 chr17 45444482 45444795 -44059758 + AluJb SINE Alu 1 312 0 228 75 0 0 chr17 45444874 45444914 -44059639 - Alu SINE Alu -1 301 262 2547 58 0 3 chr17 45445015 45445309 -44059244 - AluY SINE Alu -18 293 1 25 65 0 0 chr17 45445767 45445813 -44058740 + AT_rich Low_complexity Low_complexity 1 46 0 228 67 0 0 chr17 45448203 45448233 -44056320 + (CAGCC)n Simple_repeat Simple_repeat 3 32 0 1053 117 0 14 chr17 45449999 45450144 -44054409 + FLAM_C SINE Alu 1 143 0 2261 127 0 3 chr17 45450607 45450915 -44053638 + AluSx SINE Alu 1 307 -5 2247 82 7 0 chr17 45450916 45451196 -44053357 + AluSg SINE Alu 22 303 -7 564 328 63 17 chr17 45451332 45451570 -44052983 - MIR SINE MIR -1 261 13 701 160 23 15 chr17 45453979 45454110 -44050443 - FLAM_C SINE Alu 0 133 2 2292 100 3 0 chr17 45454308 45454597 -44049956 + AluSq SINE Alu 1 290 -23 1595 187 20 13 chr17 45455381 45455681 -44048872 + AluSq SINE Alu 1 302 -11 2088 143 7 3 chr17 45456021 45456321 -44048232 - AluSx SINE Alu -10 302 2 1833 138 69 0 chr17 45457756 45458032 -44046521 + AluSg SINE Alu 1 295 -15 186 43 0 0 chr17 45458102 45458125 -44046428 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 1772 159 0 4 chr17 45458125 45458396 -44046157 - AluSx SINE Alu -42 270 1 1662 155 6 73 chr17 45458511 45458690 -44045863 - AluJb SINE Alu -3 309 159 2356 108 3 0 chr17 45458690 45458996 -44045557 - AluSc SINE Alu -2 307 1 1662 155 6 73 chr17 45458996 45459133 -44045420 - AluJb SINE Alu -153 159 14 411 165 216 0 chr17 45459166 45459263 -44045290 - FLAM_A SINE Alu -1 141 24 201 39 0 0 chr17 45459389 45459415 -44045138 + (CA)n Simple_repeat Simple_repeat 2 27 0 201 74 0 0 chr17 45459415 45459442 -44045111 + (TC)n Simple_repeat Simple_repeat 2 28 0 278 353 0 0 chr17 45460227 45460366 -44044187 + (TGG)n Simple_repeat Simple_repeat 1 139 0 1020 181 0 12 chr17 45460800 45460961 -44043592 - AluJo SINE Alu -18 294 134 1595 172 0 15 chr17 45460961 45461229 -44043324 - AluJo SINE Alu -14 298 35 2480 71 3 0 chr17 45461312 45461608 -44042945 + AluSg SINE Alu 1 297 -13 1137 77 14 0 chr17 45461761 45461904 -44042649 - AluSg SINE Alu -148 162 18 1195 134 102 48 chr17 45461921 45461956 -44042597 - Charlie5 DNA MER1_type -45 2579 2547 1736 185 34 0 chr17 45461956 45462254 -44042299 + AluJo SINE Alu 1 308 -4 1195 134 102 48 chr17 45462254 45462279 -44042274 - Charlie5 DNA MER1_type -77 2547 2525 1774 166 10 10 chr17 45462279 45462580 -44041973 - AluJb SINE Alu -11 301 1 1195 134 102 48 chr17 45462580 45462831 -44041722 - Charlie5 DNA MER1_type -99 2525 2250 2348 98 0 0 chr17 45462850 45463166 -44041387 - AluSq SINE Alu 0 313 1 26 50 0 0 chr17 45463196 45463236 -44041317 + AT_rich Low_complexity Low_complexity 1 40 0 701 185 37 0 chr17 45463237 45463372 -44041181 + FLAM_C SINE Alu 2 141 -2 1941 138 10 7 chr17 45463373 45463671 -44040882 - AluSx SINE Alu -13 299 1 196 244 0 0 chr17 45463925 45463970 -44040583 - MIR SINE MIR -110 152 108 1915 131 0 59 chr17 45464109 45464215 -44040338 + AluJo SINE Alu 12 123 -189 2562 57 0 3 chr17 45464215 45464514 -44040039 - AluY SINE Alu -13 298 1 1915 131 0 59 chr17 45464514 45464712 -44039841 + AluJo SINE Alu 123 298 -14 208 321 98 36 chr17 45464896 45465008 -44039545 - MIR SINE MIR -63 145 27 1216 153 205 31 chr17 45465025 45465279 -44039274 - AluJo SINE Alu -12 300 3 448 177 5 177 chr17 45465282 45465491 -44039062 + MER104 DNA MER2_type 5 177 -3 2135 120 3 17 chr17 45465553 45465854 -44038699 - AluSx SINE Alu -15 297 1 225 304 87 9 chr17 45465856 45465971 -44038582 - MIR SINE MIR -65 197 74 2525 73 7 0 chr17 45465980 45466282 -44038271 - AluSp SINE Alu -9 304 1 2014 140 7 13 chr17 45466282 45466582 -44037971 - AluSx SINE Alu -14 298 1 2296 113 3 0 chr17 45466596 45466907 -44037646 - AluSx SINE Alu 0 312 1 495 0 0 0 chr17 45466947 45467002 -44037551 + (TG)n Simple_repeat Simple_repeat 2 56 0 1694 77 3 216 chr17 45467002 45467364 -44037189 - AluSq SINE Alu -28 285 1 570 144 0 0 chr17 45467503 45467593 -44036960 - AluJ/FLAM SINE Alu -210 102 13 231 36 0 0 chr17 45467611 45467639 -44036914 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1154 103 0 0 chr17 45467639 45467785 -44036768 - AluSg/x SINE Alu -33 279 134 2182 96 34 7 chr17 45467785 45468077 -44036476 - AluSc SINE Alu -9 300 1 1139 111 0 69 chr17 45468108 45468297 -44036256 + AluSp SINE Alu 137 312 -1 22 0 0 0 chr17 45468297 45468319 -44036234 + AT_rich Low_complexity Low_complexity 1 22 0 294 339 87 10 chr17 45468470 45468620 -44035933 - MIR SINE MIR -56 206 47 908 74 8 8 chr17 45468936 45469057 -44035496 - AluSp SINE Alu -188 125 5 2486 67 3 3 chr17 45469061 45469360 -44035193 - AluY SINE Alu -8 303 5 2269 91 20 3 chr17 45469364 45469662 -44034891 - AluSx SINE Alu -8 304 2 1109 166 11 0 chr17 45469669 45469850 -44034703 - AluSg/x SINE Alu -13 299 117 827 171 6 6 chr17 45470353 45470511 -44034042 - AluJb SINE Alu -7 305 148 443 168 48 40 chr17 45470546 45470562 -44033991 - FRAM SINE Alu -136 40 26 249 57 0 0 chr17 45470562 45470597 -44033956 + (TTGG)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 45470597 45470705 -44033848 - FRAM SINE Alu -150 26 1 214 322 43 35 chr17 45470747 45470862 -44033691 - L2 LINE L2 -3034 280 165 3261 103 0 4 chr17 45471144 45471628 -44032925 + L1PA8 LINE L1 5668 6149 -23 1088 88 0 6 chr17 45471681 45471862 -44032691 + (GA)n Simple_repeat Simple_repeat 1 180 0 1676 0 0 0 chr17 45472181 45472368 -44032185 - U2 snRNA snRNA -1 187 1 223 316 25 0 chr17 45473377 45473456 -44031097 + L2 LINE L2 3232 3312 -1 304 186 85 119 chr17 45473783 45473901 -44030652 + MER96B DNA MER1_type? 1 114 -303 3283 181 9 32 chr17 45473904 45474580 -44029973 + LTR13 LTR ERVK 1 660 -347 926 177 10 21 chr17 45474730 45474922 -44029631 - LTR13 LTR ERVK -817 190 1 304 186 85 119 chr17 45474925 45475043 -44029510 - MER96B DNA MER1_type? -303 114 1 241 318 54 16 chr17 45475368 45475497 -44029056 - L2 LINE L2 -1 3312 3179 1676 0 0 0 chr17 45476441 45476628 -44027925 + U2 snRNA snRNA 1 187 -1 756 143 18 0 chr17 45476933 45477101 -44027452 + CT-rich Low_complexity Low_complexity 2 172 0 3261 103 0 4 chr17 45477124 45477608 -44026945 - L1PA8 LINE L1 -23 6149 5668 214 322 43 35 chr17 45477892 45478007 -44026546 + L2 LINE L2 165 280 -3034 443 168 48 40 chr17 45478049 45478157 -44026396 + FRAM SINE Alu 1 26 -150 249 57 0 0 chr17 45478157 45478192 -44026361 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 45478192 45478208 -44026345 + FRAM SINE Alu 26 40 0 827 171 6 6 chr17 45478243 45478401 -44026152 + AluJb SINE Alu 148 305 -7 1155 165 0 0 chr17 45478907 45479095 -44025458 + AluSg/x SINE Alu 117 304 -8 2328 68 24 0 chr17 45479096 45479388 -44025165 + AluSx SINE Alu 1 299 -13 2098 92 3 20 chr17 45479398 45479702 -44024851 + AluSp SINE Alu 9 307 -6 494 254 16 0 chr17 45479711 45479837 -44024716 - MER33 DNA MER1_type -194 130 3 4842 163 20 44 chr17 45479995 45481026 -44023527 - LTR13 LTR ERVK 0 1007 1 287 170 94 132 chr17 45481035 45481141 -44023412 + MER96B DNA MER1_type? 310 411 -6 218 248 35 62 chr17 45481710 45481823 -44022730 - L2 LINE L2 -221 3051 2942 848 82 8 16 chr17 45482377 45482499 -44022054 - AluSp SINE Alu -188 125 5 2422 71 3 3 chr17 45482503 45482798 -44021755 - AluY SINE Alu -12 299 5 2253 94 20 3 chr17 45482802 45483100 -44021453 - AluSx SINE Alu -8 304 2 1096 171 11 0 chr17 45483107 45483288 -44021265 - AluSg/x SINE Alu -13 297 115 818 185 158 0 chr17 45483770 45483954 -44020599 - AluJb SINE Alu -13 299 87 2545 90 0 0 chr17 45484035 45484347 -44020206 + AluSp SINE Alu 1 312 -1 2349 94 7 0 chr17 45485374 45485672 -44018881 - AluSp SINE Alu -13 300 1 24 53 0 0 chr17 45485676 45485714 -44018839 + AT_rich Low_complexity Low_complexity 1 38 0 2002 141 3 7 chr17 45485714 45486013 -44018540 + AluSx SINE Alu 1 298 -14 664 200 37 0 chr17 45486014 45486149 -44018404 - FLAM_C SINE Alu -2 141 2 28 48 0 0 chr17 45486150 45486192 -44018361 + AT_rich Low_complexity Low_complexity 1 42 0 2291 193 7 13 chr17 45486249 45486704 -44017849 - LTR13 LTR ERVK -555 452 1 304 186 85 119 chr17 45486707 45486825 -44017728 - MER96B DNA MER1_type? -303 114 1 249 281 31 104 chr17 45487150 45487506 -44017047 - L2 LINE L2 -1 3271 2942 1676 0 0 0 chr17 45488237 45488424 -44016129 + U2 snRNA snRNA 1 187 -1 1052 88 6 0 chr17 45488741 45488912 -44015641 + (TC)n Simple_repeat Simple_repeat 1 172 0 3261 103 0 4 chr17 45488959 45489443 -44015110 - L1PA8 LINE L1 -23 6149 5668 214 322 43 35 chr17 45489726 45489841 -44014712 + L2 LINE L2 165 280 -3034 443 168 48 40 chr17 45489883 45489991 -44014562 + FRAM SINE Alu 1 26 -150 249 57 0 0 chr17 45489991 45490026 -44014527 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 45490026 45490042 -44014511 + FRAM SINE Alu 26 40 0 827 171 6 6 chr17 45490077 45490235 -44014318 + AluJb SINE Alu 148 305 -7 1155 165 0 0 chr17 45490744 45490932 -44013621 + AluSg/x SINE Alu 117 304 -8 2338 68 24 0 chr17 45490933 45491226 -44013327 + AluSx SINE Alu 1 300 -12 2098 92 3 20 chr17 45491236 45491540 -44013013 + AluSp SINE Alu 9 307 -6 494 254 16 0 chr17 45491549 45491675 -44012878 - MER33 DNA MER1_type -194 130 3 3982 173 25 48 chr17 45491833 45492730 -44011823 - LTR13 LTR ERVK 0 1007 132 762 174 0 8 chr17 45493932 45494064 -44010489 + FLAM_A SINE Alu 1 131 -2 224 130 22 0 chr17 45494429 45494475 -44010078 + (TTA)n Simple_repeat Simple_repeat 1 47 0 23 68 0 0 chr17 45494576 45494620 -44009933 + AT_rich Low_complexity Low_complexity 1 44 0 248 298 60 0 chr17 45494932 45495016 -44009537 + L2 LINE L2 2980 3068 -245 210 37 0 0 chr17 45495056 45495083 -44009470 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 862 121 8 0 chr17 45496328 45496460 -44008093 - L1PA16 LINE L1 -9 6157 6025 24 0 0 0 chr17 45496576 45496600 -44007953 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr17 45497059 45497086 -44007467 + AT_rich Low_complexity Low_complexity 1 27 0 251 236 47 95 chr17 45497175 45497323 -44007230 + MIR SINE MIR 66 206 -56 1096 197 139 3 chr17 45497340 45497649 -44006904 - L1ME1 LINE L1 -5 6161 5811 26 30 0 0 chr17 45497649 45497682 -44006871 + AT_rich Low_complexity Low_complexity 1 33 0 2889 17 0 0 chr17 45497729 45498073 -44006480 - L1PA2 LINE L1 -2 6153 5810 266 305 34 62 chr17 45498581 45498758 -44005795 - MIR SINE MIR -15 247 76 287 196 21 113 chr17 45498909 45498963 -44005590 - MER20 DNA MER1_type -47 172 129 1975 68 64 11 chr17 45498963 45499126 -44005427 - AluY SINE Alu -15 296 110 386 20 20 0 chr17 45499126 45499177 -44005376 + (TTTTA)n Simple_repeat Simple_repeat 2 53 0 1975 68 64 11 chr17 45499177 45499294 -44005259 - AluY SINE Alu -201 110 1 287 196 21 113 chr17 45499294 45499336 -44005217 - MER20 DNA MER1_type -90 129 85 29 28 0 0 chr17 45499740 45499776 -44004777 + AT_rich Low_complexity Low_complexity 1 36 0 2352 86 3 0 chr17 45500970 45501262 -44003291 - AluSp SINE Alu -18 295 3 3335 114 106 65 chr17 45501844 45502511 -44002042 - LTR13 LTR ERVK -312 695 1 12770 233 11 5 chr17 45502511 45506924 -43997629 - HERVK13 LTR ERVK 0 8116 3567 277 210 10 40 chr17 45706927 45707027 -43797526 + G-rich Low_complexity Low_complexity 6 102 0 198 0 0 0 chr17 45708447 45708469 -43796084 + (CCCCAG)n Simple_repeat Simple_repeat 1 22 0 326 151 0 82 chr17 45709497 45709570 -43794983 + L3 LINE CR1 1395 1461 -116 704 192 51 37 chr17 45710613 45710827 -43793726 + MER20 DNA MER1_type 1 217 -2 1152 96 13 0 chr17 45711183 45711340 -43793213 - AluY SINE Alu -9 302 144 2248 102 3 43 chr17 45711686 45712009 -43792544 + AluSg SINE Alu 1 310 0 1790 166 24 3 chr17 45712234 45712524 -43792029 + AluJb SINE Alu 5 300 -12 1082 203 32 0 chr17 45713440 45713657 -43790896 - MER58A DNA MER1_type 0 224 1 25 0 0 0 chr17 45713917 45713942 -43790611 + AT_rich Low_complexity Low_complexity 1 25 0 239 216 34 0 chr17 45713980 45714068 -43790485 + (TA)n Simple_repeat Simple_repeat 1 91 0 2378 89 0 0 chr17 45714068 45714359 -43790194 - AluSq SINE Alu -22 291 1 844 195 105 35 chr17 45714361 45714561 -43789992 - AluJo SINE Alu -18 294 81 634 153 0 17 chr17 45714568 45714686 -43789867 - FRAM SINE Alu 0 176 61 2246 75 7 14 chr17 45714714 45714996 -43789557 - AluSg1 SINE Alu -17 292 13 1625 200 3 28 chr17 45715082 45715376 -43789177 + AluJb SINE Alu 1 288 -24 285 29 0 0 chr17 45715376 45715410 -43789143 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1625 200 3 28 chr17 45715410 45715435 -43789118 + AluJb SINE Alu 288 312 0 447 183 134 94 chr17 45715499 45715701 -43788852 - MER63A DNA MER1_type 0 210 1 525 227 17 8 chr17 45716108 45716227 -43788326 + MIR SINE MIR 41 160 -102 199 221 118 0 chr17 45716708 45716776 -43787777 + MIR SINE MIR 22 97 -165 227 258 11 97 chr17 45717743 45717836 -43786717 - MER91C DNA MER1_type 0 140 56 517 255 99 0 chr17 45718291 45718483 -43786070 + L1M4 LINE L1 5180 5390 -756 2499 93 0 0 chr17 45718483 45718793 -43785760 + AluSg SINE Alu 1 310 0 2412 85 6 0 chr17 45718814 45719133 -43785420 + LTR46 LTR ERV1 140 460 0 978 163 39 11 chr17 45719133 45719311 -43785242 + Tigger3(Golem) DNA MER2_type 2847 3029 0 26 30 0 0 chr17 45719513 45719546 -43785007 + AT_rich Low_complexity Low_complexity 1 33 0 2591 60 0 0 chr17 45721341 45721643 -43782910 + AluY SINE Alu 1 302 -9 306 0 0 0 chr17 45723865 45723899 -43780654 + (A)n Simple_repeat Simple_repeat 1 34 0 401 206 66 44 chr17 45723902 45724038 -43780515 - MER58 DNA MER1_type -2211 209 71 418 208 0 0 chr17 45724049 45724121 -43780432 - AluJ/FLAM SINE Alu -239 73 2 2159 130 10 0 chr17 45724131 45724424 -43780129 - AluSx SINE Alu -16 296 1 2222 129 10 0 chr17 45725145 45725454 -43779099 + AluSx SINE Alu 1 312 0 341 260 81 8 chr17 45725843 45725966 -43778587 - MLT1J LTR MaLR -45 466 335 2258 98 7 3 chr17 45726003 45726299 -43778254 + AluSq SINE Alu 1 297 -16 871 152 0 36 chr17 45726384 45726522 -43778031 + AluJb SINE Alu 1 133 -179 22 0 0 0 chr17 45726523 45726545 -43778008 + AT_rich Low_complexity Low_complexity 1 22 0 227 253 222 30 chr17 45726550 45726649 -43777904 - MIR SINE MIR -75 133 16 230 244 47 35 chr17 45727235 45727321 -43777232 - MLT1H LTR MaLR -445 104 18 236 253 93 40 chr17 45727695 45727754 -43776799 + L2 LINE L2 3233 3298 -15 306 0 0 0 chr17 45727754 45727788 -43776765 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 236 253 93 40 chr17 45727788 45727803 -43776750 + L2 LINE L2 3298 3311 -2 227 395 23 11 chr17 45728078 45728255 -43776298 + L1ME LINE L1 5621 5799 -365 2004 121 39 18 chr17 45728255 45728585 -43775968 + MER1B DNA MER1_type 1 337 0 2223 85 15 88 chr17 45728744 45728888 -43775665 + AluSg SINE Alu 1 154 -156 2300 103 0 0 chr17 45728888 45729170 -43775383 + AluSc SINE Alu 1 282 -27 279 0 0 0 chr17 45729170 45729201 -43775352 + (TA)n Simple_repeat Simple_repeat 2 32 0 2223 85 15 88 chr17 45729201 45729386 -43775167 + AluSg SINE Alu 152 307 -3 1781 185 18 3 chr17 45729405 45729691 -43774862 + AluJo SINE Alu 1 290 -22 2376 63 13 7 chr17 45729926 45730227 -43774326 - AluY SINE Alu -8 303 1 3106 121 10 6 chr17 45730236 45730286 -43774267 - L1PA13 LINE L1 -3 6160 6112 403 113 127 0 chr17 45730286 45730357 -43774196 + MADE1 DNA Mariner 1 80 0 3106 121 10 6 chr17 45730357 45730811 -43773742 - L1PA13 LINE L1 -51 6112 5654 1054 164 68 19 chr17 45730811 45731018 -43773535 - THE1B LTR MaLR -1 363 147 21 0 0 0 chr17 45731377 45731398 -43773155 + AT_rich Low_complexity Low_complexity 1 21 0 2754 161 39 4 chr17 45731503 45732023 -43772530 - L1MB2 LINE L1 0 6171 5634 1554 156 56 19 chr17 45732803 45732935 -43771618 + AluSc SINE Alu 1 127 -182 2082 89 57 0 chr17 45732935 45733215 -43771338 + AluSg SINE Alu 1 296 -14 1554 156 56 19 chr17 45733215 45733351 -43771202 + AluSc SINE Alu 127 279 -30 969 199 112 59 chr17 45733490 45733624 -43770929 + AluJo SINE Alu 1 127 -175 2181 132 26 0 chr17 45733624 45733928 -43770625 + AluSx SINE Alu 1 312 0 969 199 112 59 chr17 45733928 45734080 -43770473 + AluJo SINE Alu 127 302 0 690 272 138 45 chr17 45734098 45734547 -43770006 + MLT1G LTR MaLR 50 540 -27 341 238 9 0 chr17 45734544 45734649 -43769904 - AluSg/x SINE Alu -8 294 189 * 1436 120 15 0 chr17 45734866 45734935 -43769618 - AluSq SINE Alu -110 203 137 2282 85 23 7 chr17 45734935 45735242 -43769311 - AluSp SINE Alu -1 312 1 1436 120 15 0 chr17 45735242 45735372 -43769181 - AluSq SINE Alu -176 137 1 265 297 19 45 chr17 45735373 45735528 -43769025 - L1ME LINE L1 -356 5765 5615 2325 75 13 16 chr17 45735528 45735834 -43768719 - AluY SINE Alu -6 305 1 1016 76 23 8 chr17 45735837 45735968 -43768585 - AluSq/x SINE Alu -179 133 1 560 93 23 0 chr17 45736511 45736597 -43767956 - AluSg/x SINE Alu -8 301 214 607 130 14 51 chr17 45736655 45736793 -43767760 + FLAM_C SINE Alu 1 133 0 2336 90 10 0 chr17 45737163 45737462 -43767091 + AluSx SINE Alu 1 302 -10 2022 139 7 3 chr17 45737597 45737891 -43766662 + AluSx SINE Alu 1 295 -17 263 231 218 0 chr17 45738637 45738715 -43765838 - MIR SINE MIR -8 254 160 427 284 21 5 chr17 45738746 45738936 -43765617 - L1MC5 LINE L1 -50 7911 7719 2173 100 7 29 chr17 45739278 45739587 -43764966 + AluY SINE Alu 1 302 -9 434 295 24 42 chr17 45739765 45739931 -43764622 - MIR3 SINE MIR -28 180 18 2254 119 0 22 chr17 45740467 45740786 -43763767 - AluSx SINE Alu 0 312 1 609 187 0 0 chr17 45740810 45740917 -43763636 - U6 snRNA snRNA 0 107 1 362 180 67 0 chr17 45740926 45741015 -43763538 - L1ME4a LINE L1 -238 5883 5789 2493 81 0 0 chr17 45741028 45741335 -43763218 - AluY SINE Alu -4 307 1 885 192 0 6 chr17 45741388 45741560 -43762993 - AluY SINE Alu -9 302 132 2491 78 7 7 chr17 45741666 45741974 -43762579 - AluY SINE Alu -3 308 1 2273 72 28 10 chr17 45741974 45742265 -43762288 - AluSc SINE Alu -13 296 1 577 156 0 0 chr17 45742266 45742356 -43762197 - AluJ/FLAM SINE Alu -221 91 2 242 326 61 33 chr17 45742441 45742622 -43761931 + L2 LINE L2 2831 3016 -256 1443 114 38 0 chr17 45742622 45742833 -43761720 - AluSp SINE Alu -5 308 90 1054 118 0 0 chr17 45743222 45743358 -43761195 + AluSq/x SINE Alu 1 136 -176 2233 117 3 3 chr17 45743358 45743658 -43760895 + AluSg SINE Alu 1 300 -10 1981 128 60 13 chr17 45743796 45744094 -43760459 + AluSx SINE Alu 1 312 0 3256 187 64 51 chr17 45744334 45744987 -43759566 - LTR13 LTR ERVK -217 790 124 2482 61 3 7 chr17 45744987 45745283 -43759270 + AluY SINE Alu 1 295 -16 3256 187 64 51 chr17 45745283 45745409 -43759144 - LTR13 LTR ERVK -883 124 1 2208 111 0 3 chr17 45745621 45745918 -43758635 + AluY SINE Alu 1 296 -15 2329 90 0 7 chr17 45746125 45746425 -43758128 - AluSc SINE Alu -11 298 1 729 161 0 0 chr17 45746429 45746553 -43758000 - FLAM_A SINE Alu -9 133 10 464 162 81 0 chr17 45746575 45746686 -43757867 - FRAM SINE Alu -17 159 40 2507 60 0 7 chr17 45746866 45747193 -43757360 - AluY SINE Alu 0 311 1 2144 110 0 13 chr17 45747195 45747496 -43757057 - AluSg SINE Alu -13 297 1 316 102 0 0 chr17 45747497 45747546 -43757007 - Alu SINE Alu -4 297 249 485 211 53 0 chr17 45747890 45748004 -43756549 + MIR3 SINE MIR 88 207 -1 315 0 0 0 chr17 45748012 45748047 -43756506 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 181 270 135 22 chr17 45748806 45748895 -43755658 - L2 LINE L2 -93 3179 3081 284 296 34 0 chr17 45748898 45748986 -43755567 + MIR3 SINE MIR 92 182 -26 1860 114 8 0 chr17 45749299 45749553 -43755000 + AluSx SINE Alu 52 307 -5 1305 86 6 0 chr17 45749553 45749716 -43754837 + AluSq SINE Alu 134 297 -16 715 234 6 0 chr17 45749721 45749879 -43754674 + FRAM SINE Alu 2 160 -6 1300 108 0 0 chr17 45749974 45750150 -43754403 + AluSg/x SINE Alu 135 310 0 250 286 33 0 chr17 45750704 45750795 -43753758 + MIR SINE MIR 36 129 -79 634 85 11 0 chr17 45750901 45750995 -43753558 - AluSg/x SINE Alu -11 298 204 278 163 0 0 chr17 45751380 45751429 -43753124 - LTR13 LTR ERVK -958 49 1 1783 161 9 38 chr17 45751493 45751636 -43752917 + AluJb SINE Alu 1 147 -165 2585 47 0 7 chr17 45751636 45751933 -43752620 + AluY SINE Alu 1 295 -16 1783 161 9 38 chr17 45751933 45752105 -43752448 + AluJb SINE Alu 147 307 -5 2368 105 0 3 chr17 45752867 45753180 -43751373 + AluSx SINE Alu 1 312 0 2674 64 0 0 chr17 45753441 45753752 -43750801 - AluY SINE Alu 0 311 1 605 161 71 9 chr17 45753752 45753864 -43750689 - AluJo SINE Alu -176 136 18 1969 144 202 0 chr17 45753864 45754295 -43750258 - L1MC3 LINE L1 -93 7692 7175 327 273 0 0 chr17 45754295 45754372 -43750181 - MLT1F1 LTR MaLR -456 111 35 2529 69 3 0 chr17 45754380 45754683 -43749870 - AluY SINE Alu -6 305 2 315 0 0 0 chr17 45755464 45755499 -43749054 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 446 222 30 0 chr17 45755522 45755621 -43748932 - MIR3 SINE MIR -19 189 88 238 161 161 124 chr17 45755808 45755866 -43748687 - MIR SINE MIR -25 183 129 2457 105 0 3 chr17 45755866 45756179 -43748374 + AluSq SINE Alu 1 312 -1 238 161 161 124 chr17 45756179 45756257 -43748296 - MIR SINE MIR -79 129 42 296 305 103 40 chr17 45756507 45756681 -43747872 - MIR3 SINE MIR -8 200 16 1856 154 0 47 chr17 45756735 45756907 -43747646 - AluSx SINE Alu -7 305 153 190 74 0 0 chr17 45756916 45756943 -43747610 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1928 125 0 17 chr17 45756943 45757228 -43747325 - AluSg SINE Alu -8 302 1 1856 154 0 47 chr17 45757228 45757374 -43747179 - AluSx SINE Alu -159 153 2 2068 137 0 0 chr17 45757386 45757726 -43746827 - AluSq SINE Alu 0 313 1 929 111 7 7 chr17 45757726 45757861 -43746692 - AluSq/x SINE Alu -178 135 1 2104 93 3 3 chr17 45758539 45758839 -43745714 - AluY SINE Alu -11 300 1 234 0 0 0 chr17 45758900 45758926 -43745627 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 1555 128 0 13 chr17 45759026 45759117 -43745436 - AluSx SINE Alu -88 224 133 2130 98 3 10 chr17 45759117 45759413 -43745140 - AluSg SINE Alu -16 294 1 1555 128 0 13 chr17 45759413 45759547 -43745006 - AluSx SINE Alu -179 133 2 741 191 8 0 chr17 45759555 45759686 -43744867 - FLAM_A SINE Alu -1 132 1 1999 80 94 0 chr17 45759712 45759987 -43744566 - AluSx SINE Alu -11 301 1 342 237 149 18 chr17 45760556 45760670 -43743883 + MIR SINE MIR 19 147 -61 330 259 25 0 chr17 45760752 45760833 -43743720 + MER5B DNA MER1_type 48 130 -48 1274 87 92 0 chr17 45760836 45761021 -43743532 - L1PA11 LINE L1 0 6174 5973 1863 165 0 0 chr17 45761024 45761321 -43743232 - AluJb SINE Alu -15 297 1 230 0 0 32 chr17 45761994 45762025 -43742528 + (TG)n Simple_repeat Simple_repeat 1 30 0 204 40 0 0 chr17 45762024 45762049 -43742504 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 1498 115 0 14 chr17 45762598 45762807 -43741746 - AluSq SINE Alu -107 206 1 231 36 0 0 chr17 45762906 45762934 -43741619 + (TG)n Simple_repeat Simple_repeat 2 29 0 821 182 25 44 chr17 45762934 45763093 -43741460 - FRAM SINE Alu -19 157 2 1420 168 27 27 chr17 45763097 45763263 -43741290 - AluJo SINE Alu -14 298 130 2259 87 0 13 chr17 45763263 45763563 -43740990 - AluSg SINE Alu -14 296 1 1420 168 27 27 chr17 45763563 45763694 -43740859 - AluJo SINE Alu -181 131 1 2316 62 0 7 chr17 45763837 45764159 -43740394 - AluY SINE Alu 0 320 1 292 154 0 0 chr17 45764266 45764318 -43740235 - MER6 DNA MER2_type 0 865 814 973 188 9 14 chr17 45764320 45764498 -43740055 - AluSg/x SINE Alu 0 315 137 2043 115 24 0 chr17 45764498 45764794 -43739759 - AluSp SINE Alu -10 303 1 973 188 9 14 chr17 45764794 45764849 -43739704 - AluSg/x SINE Alu -178 137 83 782 139 0 0 chr17 45764849 45764957 -43739596 - AluSc SINE Alu -61 248 141 1082 173 0 78 chr17 45764957 45765188 -43739365 - AluJb SINE Alu -99 213 1 1749 79 110 76 chr17 45765197 45765487 -43739066 - AluSp SINE Alu -13 300 1 392 262 0 41 chr17 45765489 45765611 -43738942 - L1ME LINE L1 -415 5706 5590 210 250 0 0 chr17 45766474 45766518 -43738035 + (CA)n Simple_repeat Simple_repeat 1 44 0 923 189 0 0 chr17 45766632 45766807 -43737746 - MER3 DNA MER1_type -81 128 1 265 244 200 0 chr17 45767613 45767703 -43736850 - MIR SINE MIR -6 256 149 224 296 228 6 chr17 45767705 45767867 -43736686 + MIR SINE MIR 3 200 -62 261 293 69 17 chr17 45767874 45767990 -43736563 - MIR SINE MIR -130 132 11 2267 101 0 0 chr17 45768009 45768317 -43736236 - AluSx SINE Alu -4 308 1 206 284 10 69 chr17 45768325 45768427 -43736126 + MIR SINE MIR 88 183 -79 204 114 0 29 chr17 45768704 45768739 -43735814 + (CCG)n Simple_repeat Simple_repeat 3 36 0 2152 88 7 26 chr17 45769872 45770179 -43734374 - AluSc SINE Alu -8 301 1 2185 101 0 3 chr17 45770179 45770476 -43734077 - AluY SINE Alu -8 303 7 2191 99 0 0 chr17 45770583 45770876 -43733677 - AluSx SINE Alu -12 300 8 235 271 71 0 chr17 45770962 45771032 -43733521 + MIR SINE MIR 72 146 -116 21 0 0 0 chr17 45771617 45771638 -43732915 + AT_rich Low_complexity Low_complexity 1 21 0 704 195 0 0 chr17 45772109 45772222 -43732331 - FLAM_A SINE Alu -18 115 3 1135 122 17 6 chr17 45772261 45772441 -43732112 - AluSg/x SINE Alu -22 290 109 1258 186 115 11 chr17 45772464 45772733 -43731820 - AluSg SINE Alu -13 297 1 353 314 43 70 chr17 45772792 45772977 -43731576 + L2 LINE L2 2924 3103 -210 438 208 21 0 chr17 45772982 45773078 -43731475 + MER94 DNA DNA 1 98 -36 2508 43 0 3 chr17 45773094 45773398 -43731155 - AluY SINE Alu -8 303 1 352 301 135 0 chr17 45773399 45773532 -43731021 + L2 LINE L2 3161 3311 -2 2422 67 3 0 chr17 45774002 45774301 -43730252 - AluSp SINE Alu -12 301 2 2516 52 0 3 chr17 45775145 45775455 -43729098 - AluY SINE Alu -2 309 1 2359 77 3 0 chr17 45775461 45775771 -43728782 - AluY SINE Alu 0 311 1 727 121 85 50 chr17 45775771 45775912 -43728641 - AluJo SINE Alu -166 146 1 2249 85 0 7 chr17 45775922 45776217 -43728336 - AluSq SINE Alu -20 293 1 389 291 94 12 chr17 45776221 45776436 -43728117 - L1ME4a LINE L1 -296 5825 5597 216 289 0 0 chr17 45776994 45777070 -43727483 + G-rich Low_complexity Low_complexity 3 78 0 267 103 0 0 chr17 45777198 45777237 -43727316 + (CCG)n Simple_repeat Simple_repeat 2 40 0 257 51 26 0 chr17 45778588 45778627 -43725926 + (GGCTG)n Simple_repeat Simple_repeat 5 44 0 189 0 0 0 chr17 45779647 45779668 -43724885 + (T)n Simple_repeat Simple_repeat 1 21 0 2085 114 3 3 chr17 45780013 45780311 -43724242 - AluSp SINE Alu -15 298 1 207 250 0 0 chr17 45781761 45781801 -43722752 + (CGTG)n Simple_repeat Simple_repeat 1 40 0 581 291 81 6 chr17 45782240 45782412 -43722141 - MER91A DNA MER1_type 0 196 12 203 292 200 8 chr17 45782895 45783025 -43721528 + MIR3 SINE MIR 38 192 -16 518 297 185 5 chr17 45788632 45788827 -43715726 + MIR SINE MIR 2 231 -31 246 32 0 0 chr17 45791986 45792017 -43712536 + (T)n Simple_repeat Simple_repeat 1 31 0 263 211 19 0 chr17 45792352 45792404 -43712149 + L2 LINE L2 3226 3278 -35 183 191 143 0 chr17 45792376 45792418 -43712135 + MIR SINE MIR 206 253 -9 * 2247 96 0 3 chr17 45793140 45793443 -43711110 - AluSg SINE Alu -8 302 1 321 94 82 118 chr17 45793495 45793520 -43711033 - MIR SINE MIR -142 120 96 1672 168 17 24 chr17 45793520 45793811 -43710742 + AluJo SINE Alu 3 291 -21 321 94 82 118 chr17 45793811 45793870 -43710683 - MIR SINE MIR -166 96 39 1961 67 104 4 chr17 45793906 45794176 -43710377 + AluSp SINE Alu 1 297 -16 639 314 6 0 chr17 45794180 45794349 -43710204 - MER91A DNA MER1_type -26 170 1 420 278 48 80 chr17 45794716 45794903 -43709650 - MER5A DNA MER1_type 0 189 9 530 302 50 6 chr17 45795672 45795854 -43708699 + MIR3 SINE MIR 16 205 -3 407 182 0 116 chr17 45796422 45796437 -43708116 + Charlie4 DNA MER1_type 1851 1866 -95 2037 102 58 0 chr17 45796437 45796731 -43707822 - AluSx SINE Alu -1 311 1 407 182 0 116 chr17 45796731 45796762 -43707791 + Charlie4 DNA MER1_type 1866 1899 -62 2363 82 3 0 chr17 45796762 45797065 -43707488 + AluSq SINE Alu 1 304 -9 407 182 0 116 chr17 45797065 45797138 -43707415 + Charlie4 DNA MER1_type 1899 1957 -4 350 330 94 5 chr17 45797174 45797377 -43707176 - MIR SINE MIR -36 226 6 1913 108 16 26 chr17 45797803 45798108 -43706445 + AluSc SINE Alu 1 302 -7 2124 99 3 10 chr17 45798111 45798405 -43706148 + AluSc SINE Alu 1 292 -17 260 154 115 0 chr17 45798409 45798461 -43706092 - MIR SINE MIR -107 101 44 705 327 0 20 chr17 45798466 45798665 -43705888 - MER91A DNA MER1_type -1 195 1 489 302 28 39 chr17 45798993 45799175 -43705378 + MIR3 SINE MIR 18 197 -11 2271 80 6 26 chr17 45799335 45799647 -43704906 - AluY SINE Alu -5 306 1 24 0 0 0 chr17 45799658 45799682 -43704871 + AT_rich Low_complexity Low_complexity 1 24 0 2386 67 0 7 chr17 45799682 45799982 -43704571 + AluSc SINE Alu 1 298 -11 2104 93 0 54 chr17 45800001 45800314 -43704239 - AluSg SINE Alu -14 296 1 21 0 0 0 chr17 45800314 45800335 -43704218 + AT_rich Low_complexity Low_complexity 1 21 0 2514 62 0 0 chr17 45800993 45801299 -43703254 + AluY SINE Alu 1 306 -5 2121 104 3 0 chr17 45801622 45801910 -43702643 - AluSp SINE Alu -2 311 23 2151 118 0 7 chr17 45802008 45802312 -43702241 - AluSx SINE Alu -10 302 1 1831 79 0 0 chr17 45803748 45803977 -43700576 + AluSq SINE Alu 1 229 -84 2300 100 0 7 chr17 45803994 45804304 -43700249 + AluSq SINE Alu 1 308 -5 251 360 0 5 chr17 45804955 45805067 -43699486 + C-rich Low_complexity Low_complexity 1 111 0 544 232 147 11 chr17 45805460 45805663 -43698890 + MIR SINE MIR 9 236 -26 1629 151 44 4 chr17 45805677 45805948 -43698605 + AluJo SINE Alu 1 282 -30 262 232 49 24 chr17 45805950 45806032 -43698521 + L1MC4 LINE L1 6620 6703 -1339 2189 101 0 0 chr17 45806113 45806410 -43698143 - AluY SINE Alu -14 297 1 1987 132 6 10 chr17 45806416 45806727 -43697826 - AluSx SINE Alu -2 310 1 230 231 0 0 chr17 45807049 45807114 -43697439 + (CAG)n Simple_repeat Simple_repeat 3 67 0 287 179 0 43 chr17 45807276 45807416 -43697137 + (CAG)n Simple_repeat Simple_repeat 3 136 0 390 172 95 118 chr17 45809700 45809776 -43694777 - Charlie5 DNA MER1_type 0 2585 2509 2369 68 0 7 chr17 45809776 45810083 -43694470 + AluY SINE Alu 1 305 -6 390 172 95 118 chr17 45810083 45810101 -43694452 - Charlie5 DNA MER1_type -76 2509 2492 2115 88 7 0 chr17 45810101 45810385 -43694168 + AluSq SINE Alu 11 296 -17 390 172 95 118 chr17 45810385 45810458 -43694095 - Charlie5 DNA MER1_type -93 2492 2421 804 100 7 113 chr17 45810473 45810522 -43694031 - AluJo SINE Alu -178 134 81 2178 97 0 0 chr17 45810522 45810810 -43693743 - AluSx SINE Alu -20 292 5 2038 118 0 38 chr17 45810814 45810992 -43693561 - AluSx SINE Alu -9 303 141 2290 99 0 6 chr17 45810992 45811305 -43693248 - AluSq SINE Alu -2 311 1 2038 118 0 38 chr17 45811305 45811441 -43693112 - AluSx SINE Alu -171 141 1 804 100 7 113 chr17 45811441 45811536 -43693017 - AluJo SINE Alu -234 78 1 570 270 45 0 chr17 45811543 45811699 -43692854 - MER33 DNA MER1_type -272 52 1 224 191 0 44 chr17 45812305 45812373 -43692180 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1913 97 48 14 chr17 45812467 45812757 -43691796 + AluSq SINE Alu 1 300 -13 1189 99 0 0 chr17 45812757 45812919 -43691634 + AluSg/x SINE Alu 134 295 -17 270 95 0 0 chr17 45813229 45813271 -43691282 + (GGA)n Simple_repeat Simple_repeat 1 42 0 203 264 0 0 chr17 45813614 45813667 -43690886 + (TG)n Simple_repeat Simple_repeat 2 54 0 197 65 32 0 chr17 45813761 45813792 -43690761 + (CCCCCG)n Simple_repeat Simple_repeat 3 34 0 1774 116 12 78 chr17 45814826 45814966 -43689587 + AluJo SINE Alu 1 149 -163 2278 81 20 0 chr17 45814966 45815261 -43689292 + AluSx SINE Alu 1 301 -11 1774 116 12 78 chr17 45815261 45815440 -43689113 + AluJo SINE Alu 149 299 -13 1655 112 8 4 chr17 45816632 45816873 -43687680 - AluSx SINE Alu -18 294 53 1887 152 26 10 chr17 45817496 45817798 -43686755 + AluJb SINE Alu 1 307 -5 266 295 42 0 chr17 45818616 45818711 -43685842 - MIR SINE MIR -154 108 10 1996 143 0 9 chr17 45818885 45819200 -43685353 + AluSx SINE Alu 1 312 0 2378 75 0 10 chr17 45819214 45819519 -43685034 + AluSq SINE Alu 1 302 -11 525 147 63 21 chr17 45819720 45819815 -43684738 - AluJ/FLAM SINE Alu -213 99 1 439 297 33 66 chr17 45820954 45821098 -43683455 - L1MEc LINE L1 -4081 2315 2179 2450 71 0 0 chr17 45821098 45821408 -43683145 - AluSg SINE Alu 0 310 1 439 297 33 66 chr17 45821408 45821475 -43683078 - L1MEc LINE L1 -4217 2179 2111 784 176 0 0 chr17 45826874 45827005 -43677548 + AluJo/FLAM SINE Alu 1 131 -171 1772 174 6 3 chr17 45827007 45827318 -43677235 + AluJb SINE Alu 1 312 0 2136 116 3 0 chr17 45827832 45828142 -43676411 + AluSx SINE Alu 2 312 0 2290 83 0 0 chr17 45828147 45828447 -43676106 + AluSx SINE Alu 11 310 -2 525 205 134 82 chr17 45828910 45829081 -43675472 - MER5A DNA MER1_type 0 189 10 186 347 14 0 chr17 45829093 45829165 -43675388 + L2 LINE L2 3200 3272 0 241 312 68 22 chr17 45829261 45829385 -43675168 - MER5A DNA MER1_type -47 140 1 201 139 0 0 chr17 45830276 45830319 -43674234 + (A)n Simple_repeat Simple_repeat 1 43 0 2330 84 0 0 chr17 45830832 45831141 -43673412 + AluSg SINE Alu 2 310 0 1947 127 3 17 chr17 45831144 45831444 -43673109 + AluSp SINE Alu 2 297 -16 2335 68 0 0 chr17 45831552 45831844 -43672709 - AluY SINE Alu -17 294 3 397 243 111 21 chr17 45831970 45832114 -43672439 + L2 LINE L2 2897 3053 -219 2074 109 3 13 chr17 45832244 45832546 -43672007 + AluSx SINE Alu 1 299 -13 266 244 200 0 chr17 45833041 45833131 -43671422 - MIR SINE MIR -6 256 149 225 261 153 9 chr17 45833184 45833295 -43671258 + MIR SINE MIR 74 200 -62 277 284 69 17 chr17 45833302 45833418 -43671135 - MIR SINE MIR -130 132 11 2321 91 0 0 chr17 45833437 45833745 -43670808 - AluSx SINE Alu -4 308 1 204 284 10 69 chr17 45833753 45833855 -43670698 + MIR SINE MIR 88 183 -79 204 114 0 29 chr17 45834131 45834166 -43670387 + (CCG)n Simple_repeat Simple_repeat 3 36 0 2128 81 10 26 chr17 45835301 45835608 -43668945 - AluSg SINE Alu -8 302 1 2159 101 0 3 chr17 45835608 45835905 -43668648 - AluY SINE Alu -8 303 7 2169 99 0 0 chr17 45836012 45836305 -43668248 - AluSx SINE Alu -12 300 8 231 271 71 0 chr17 45836391 45836461 -43668092 + MIR SINE MIR 72 146 -116 21 0 0 0 chr17 45837041 45837062 -43667491 + AT_rich Low_complexity Low_complexity 1 21 0 696 195 0 0 chr17 45837532 45837645 -43666908 - FLAM_A SINE Alu -18 115 3 1105 119 17 6 chr17 45837684 45837861 -43666692 - AluSg/x SINE Alu -22 288 110 1386 178 119 7 chr17 45837887 45838156 -43666397 - AluSx SINE Alu -3 299 1 336 314 43 70 chr17 45838215 45838400 -43666153 + L2 LINE L2 2924 3103 -210 470 208 21 0 chr17 45838405 45838501 -43666052 + MER94 DNA DNA 1 98 -36 2487 46 0 3 chr17 45838517 45838822 -43665731 - AluY SINE Alu -7 304 1 355 301 135 0 chr17 45838823 45838956 -43665597 + L2 LINE L2 3161 3311 -2 2393 67 3 0 chr17 45839426 45839724 -43664829 - AluSp SINE Alu -13 300 2 2459 58 0 3 chr17 45840568 45840878 -43663675 - AluY SINE Alu -2 309 1 1475 115 0 14 chr17 45841245 45841454 -43663099 - AluSq SINE Alu -107 206 1 231 36 0 0 chr17 45841553 45841581 -43662972 + (TG)n Simple_repeat Simple_repeat 2 29 0 821 174 26 45 chr17 45841585 45841740 -43662813 - FRAM SINE Alu -23 153 2 1415 168 27 24 chr17 45841744 45841910 -43662643 - AluJo SINE Alu -14 298 129 2194 86 0 17 chr17 45841910 45842211 -43662342 - AluSg SINE Alu -14 296 1 1415 168 27 24 chr17 45842211 45842341 -43662212 - AluJo SINE Alu -183 129 1 2353 55 0 3 chr17 45842486 45842807 -43661746 - AluY SINE Alu 0 320 1 310 154 0 0 chr17 45842915 45842967 -43661586 - MER6 DNA MER2_type 0 865 814 1996 127 0 0 chr17 45842969 45843282 -43661271 - AluSg1 SINE Alu 0 314 2 917 182 4 49 chr17 45843285 45843317 -43661236 - AluSg/x SINE Alu -13 299 267 2393 64 3 0 chr17 45843317 45843615 -43660938 + AluY SINE Alu 3 301 -10 917 182 4 49 chr17 45843615 45843751 -43660802 - AluSg/x SINE Alu -45 267 141 2017 115 24 0 chr17 45843751 45844047 -43660506 - AluSp SINE Alu -10 303 1 917 182 4 49 chr17 45844047 45844102 -43660451 - AluSg/x SINE Alu -171 141 85 776 139 0 0 chr17 45844102 45844210 -43660343 - AluSc SINE Alu -61 248 141 1052 173 0 78 chr17 45844210 45844441 -43660112 - AluJb SINE Alu -99 213 1 2144 71 0 84 chr17 45844450 45844773 -43659780 - AluSp SINE Alu -13 300 5 300 233 33 33 chr17 45844992 45845082 -43659471 - L1MC4 LINE L1 -1339 6703 6614 1796 124 7 50 chr17 45845085 45845383 -43659170 - AluJb SINE Alu -27 285 1 2111 102 3 43 chr17 45845613 45845936 -43658617 + AluSg SINE Alu 1 310 0 1670 166 24 3 chr17 45846161 45846451 -43658102 + AluJb SINE Alu 5 300 -12 1179 203 32 0 chr17 45847367 45847584 -43656969 - MER58A DNA MER1_type 0 224 1 25 0 0 0 chr17 45847844 45847869 -43656684 + AT_rich Low_complexity Low_complexity 1 25 0 239 216 34 0 chr17 45847907 45847995 -43656558 + (TA)n Simple_repeat Simple_repeat 1 91 0 2242 89 0 0 chr17 45847995 45848286 -43656267 - AluSq SINE Alu -22 291 1 803 178 0 45 chr17 45848331 45848488 -43656065 - AluJo SINE Alu -82 230 81 1234 170 156 41 chr17 45848506 45848641 -43655912 - AluJo SINE Alu -1 301 183 1996 128 7 10 chr17 45848641 45848937 -43655616 - AluSx SINE Alu -17 295 1 1234 170 156 41 chr17 45848937 45849071 -43655482 - AluJo SINE Alu -119 183 1 1613 144 48 15 chr17 45849210 45849346 -43655207 - AluSc SINE Alu -30 279 149 1993 89 53 0 chr17 45849346 45849627 -43654926 - AluSg SINE Alu -14 296 1 1613 144 48 15 chr17 45849627 45849760 -43654793 - AluSc SINE Alu -160 149 1 702 163 59 30 chr17 45849761 45849896 -43654657 - AluJb SINE Alu -170 142 4 2110 103 0 26 chr17 45849933 45850235 -43654318 + AluSx SINE Alu 3 296 -16 2098 109 0 32 chr17 45850344 45850657 -43653896 + AluSq SINE Alu 3 305 -8 1803 163 3 0 chr17 45851178 45851485 -43653068 + AluJo SINE Alu 5 312 0 1931 130 17 7 chr17 45851519 45851844 -43652709 - AluSx SINE Alu 0 312 1 2033 139 0 0 chr17 45852251 45852552 -43652001 - AluSx SINE Alu -11 301 1 1121 208 21 107 chr17 45852579 45852674 -43651879 + L1ME1 LINE L1 5184 5286 -880 384 22 0 0 chr17 45852684 45852729 -43651824 + (TG)n Simple_repeat Simple_repeat 2 46 0 634 195 16 8 chr17 45852729 45852846 -43651707 - FLAM_C SINE Alu -181 121 1 1121 208 21 107 chr17 45852846 45852867 -43651686 + L1ME1 LINE L1 5286 5307 -859 1462 180 3 63 chr17 45852867 45853183 -43651370 + AluJo SINE Alu 3 299 -13 1121 208 21 107 chr17 45853183 45853201 -43651352 + L1ME1 LINE L1 5307 5325 -841 2195 106 0 0 chr17 45853201 45853493 -43651060 + AluSx SINE Alu 1 292 -20 1121 208 21 107 chr17 45853493 45853718 -43650835 + L1ME1 LINE L1 5325 5568 -598 2052 70 59 3 chr17 45853718 45854004 -43650549 + AluSq SINE Alu 1 302 -11 1121 208 21 107 chr17 45854004 45854015 -43650538 + L1ME1 LINE L1 5568 5578 -588 2514 60 0 10 chr17 45854015 45854321 -43650232 - AluY SINE Alu -12 299 1 1121 208 21 107 chr17 45854321 45854512 -43650041 + L1ME1 LINE L1 5578 5784 -382 2628 52 3 0 chr17 45854512 45854817 -43649736 + AluY SINE Alu 1 306 -5 1121 208 21 107 chr17 45854817 45854875 -43649678 + L1ME1 LINE L1 5784 5845 -321 1879 178 0 7 chr17 45854875 45855179 -43649374 + AluJb SINE Alu 1 302 -10 1121 208 21 107 chr17 45855179 45855417 -43649136 + L1ME1 LINE L1 5845 5957 -209 2482 78 0 0 chr17 45855422 45855715 -43648838 + AluSg SINE Alu 1 293 -17 841 112 8 15 chr17 45856926 45857060 -43647493 - FLAM_C SINE Alu 0 133 1 560 93 23 0 chr17 45857118 45857204 -43647349 + AluSg/x SINE Alu 215 302 -8 2343 88 0 14 chr17 45857745 45857881 -43646672 + AluSq SINE Alu 1 137 -176 2374 60 0 57 chr17 45857881 45858195 -43646358 + AluY SINE Alu 1 296 -15 2343 88 0 14 chr17 45858195 45858355 -43646198 + AluSq SINE Alu 137 293 -20 2382 92 0 0 chr17 45858465 45858757 -43645796 - AluSx SINE Alu -20 292 1 570 15 0 0 chr17 45859410 45859477 -43645076 + (TG)n Simple_repeat Simple_repeat 2 68 0 1674 118 4 13 chr17 45859477 45859714 -43644839 - AluSx SINE Alu -24 288 54 2039 87 11 42 chr17 45859747 45860064 -43644489 - AluSg1 SINE Alu 0 308 1 213 221 43 46 chr17 45860144 45860303 -43644250 + L2 LINE L2 3111 3312 -1 302 279 63 18 chr17 45860791 45860902 -43643651 + MIR3 SINE MIR 84 199 -9 2995 9 0 0 chr17 45861076 45861392 -43643161 + AluYb8 SINE Alu 1 316 -2 2292 86 7 3 chr17 45861403 45861694 -43642859 + AluSp SINE Alu 1 292 -21 203 152 0 0 chr17 45861765 45861798 -43642755 + (CACCC)n Simple_repeat Simple_repeat 1 33 0 2189 120 10 0 chr17 45862081 45862380 -43642173 - AluSc SINE Alu -7 302 1 1909 154 0 22 chr17 45862380 45862691 -43641862 - AluJo SINE Alu -8 304 1 539 213 28 35 chr17 45862766 45862907 -43641646 + MER58B DNA MER1_type 202 341 0 2169 79 65 0 chr17 45863641 45863918 -43640635 - AluSx SINE Alu -17 295 1 330 115 0 0 chr17 45865029 45865081 -43639472 + (T)n Simple_repeat Simple_repeat 1 52 0 28 61 0 0 chr17 45865104 45865153 -43639400 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 45866004 45866026 -43638527 + AT_rich Low_complexity Low_complexity 1 22 0 355 277 155 7 chr17 45866840 45866988 -43637565 + MIR SINE MIR 86 255 -7 1512 149 71 78 chr17 45867086 45867394 -43637159 + AluJb SINE Alu 1 306 -6 2245 103 3 0 chr17 45867549 45867840 -43636713 - AluSp SINE Alu -21 292 1 203 336 37 19 chr17 45867858 45867965 -43636588 - MIR SINE MIR -66 142 34 2501 69 3 3 chr17 45868812 45869116 -43635437 + AluY SINE Alu 1 304 -7 2238 120 3 0 chr17 45869287 45869587 -43634966 + AluSx SINE Alu 1 301 -11 277 315 172 3 chr17 45870698 45870985 -43633568 - L2 LINE L2 -226 3087 2743 281 268 112 28 chr17 45871145 45871324 -43633229 - L2 LINE L2 -883 2431 2238 361 357 38 14 chr17 45871530 45871740 -43632813 - L2 LINE L2 -2061 1253 1039 222 342 111 8 chr17 45871967 45872084 -43632469 - L3 LINE CR1 -30 1547 1419 751 267 48 48 chr17 45872396 45872569 -43631984 - L3 LINE CR1 -600 977 802 2383 98 0 3 chr17 45872569 45872866 -43631687 - AluSx SINE Alu -16 296 1 751 267 48 48 chr17 45872866 45873007 -43631546 - L3 LINE CR1 -774 803 663 255 241 235 75 chr17 45873007 45873109 -43631444 - L3 LINE CR1 -1093 484 400 2167 103 17 17 chr17 45873109 45873409 -43631144 - AluSx SINE Alu -10 302 3 255 241 235 75 chr17 45873409 45873493 -43631060 - L3 LINE CR1 -1177 400 268 1148 165 0 0 chr17 45873787 45873951 -43630602 - AluJb SINE Alu -15 297 134 2075 138 10 7 chr17 45873951 45874248 -43630305 - AluSx SINE Alu -14 298 1 261 306 46 37 chr17 45874265 45874373 -43630180 + MIR SINE MIR 39 147 -61 2273 133 0 3 chr17 45874378 45874686 -43629867 + AluJb SINE Alu 1 307 -5 774 222 64 0 chr17 45875537 45875740 -43628813 + U3 snRNA snRNA 1 216 -1 4350 44 45 27 chr17 45877338 45877933 -43626620 + LTR66 LTR ERVL 5 610 0 8316 64 28 12 chr17 45877933 45879045 -43625508 + HERVL66 LTR ERVL 1 1130 -3199 2639 78 8 0 chr17 45879045 45879404 -43625149 + HERVL66 LTR ERVL 1436 1797 -2532 * 4723 106 14 25 chr17 45879384 45880025 -43624528 + HERVL66 LTR ERVL 2654 3288 -1041 2208 113 0 3 chr17 45880025 45880325 -43624228 - AluSx SINE Alu -13 299 1 4723 106 14 25 chr17 45880325 45880398 -43624155 + HERVL66 LTR ERVL 3288 3360 -969 3622 117 12 1 chr17 45880387 45881057 -43623496 + HERVL66 LTR ERVL 3569 4329 0 * 3947 68 28 82 chr17 45881057 45881702 -43622851 + LTR66 LTR ERVL 1 610 0 906 172 38 6 chr17 45882423 45882580 -43621973 - FRAM SINE Alu -15 161 1 1961 135 28 7 chr17 45882626 45882915 -43621638 - AluSx SINE Alu -17 295 1 2158 105 0 20 chr17 45882984 45883148 -43621405 - AluSq SINE Alu -14 299 142 2325 77 23 10 chr17 45883148 45883448 -43621105 - AluY SINE Alu -7 304 1 2158 105 0 20 chr17 45883448 45883588 -43620965 - AluSq SINE Alu -171 142 1 2300 66 0 63 chr17 45883597 45883915 -43620638 - AluSg SINE Alu -12 298 1 344 155 0 14 chr17 45884016 45884124 -43620429 + Tigger5 DNA MER2_type 35 193 -2130 515 156 0 0 chr17 45884125 45884202 -43620351 + Tigger5 DNA MER2_type 2247 2323 0 223 236 9 94 chr17 45884204 45884297 -43620256 - L2 LINE L2 -71 3242 3157 2231 112 7 0 chr17 45884297 45884592 -43619961 + AluSx SINE Alu 1 297 -15 223 236 9 94 chr17 45884592 45884604 -43619949 - L2 LINE L2 -156 3157 3146 222 37 0 0 chr17 45884622 45884649 -43619904 + (TG)n Simple_repeat Simple_repeat 2 28 0 325 266 165 46 chr17 45885013 45885075 -43619478 - MIR SINE MIR -12 250 197 2341 75 0 0 chr17 45885075 45885391 -43619162 + AluY SINE Alu 1 316 0 325 266 165 46 chr17 45885391 45885545 -43619008 - MIR SINE MIR -65 197 7 431 248 92 7 chr17 45886562 45886703 -43617850 - MIR3 SINE MIR -23 185 33 217 217 43 113 chr17 45887045 45887084 -43617469 + MIR SINE MIR 59 99 -163 2243 112 7 3 chr17 45887084 45887389 -43617164 - AluSx SINE Alu -6 306 1 217 217 43 113 chr17 45887389 45887464 -43617089 + MIR SINE MIR 99 165 -97 760 149 0 45 chr17 45889760 45889894 -43614659 - FLAM_C SINE Alu -3 130 3 252 314 58 32 chr17 45890061 45890217 -43614336 - MIR SINE MIR -93 169 10 1113 61 0 0 chr17 45890298 45890430 -43614123 - AluY SINE Alu -21 290 159 1174 88 14 0 chr17 45890433 45890611 -43613942 - AluSg/x SINE Alu 0 311 132 2568 61 0 0 chr17 45890611 45890905 -43613648 - AluY SINE Alu -16 295 2 1757 163 14 4 chr17 45891370 45891646 -43612907 + AluJb SINE Alu 21 299 -13 431 319 39 6 chr17 45892390 45892572 -43611981 - MIR SINE MIR -5 257 70 25 65 0 0 chr17 45895955 45896001 -43608552 + GC_rich Low_complexity Low_complexity 1 46 0 1744 168 10 42 chr17 45896752 45897062 -43607491 - AluJb SINE Alu -12 300 1 2415 107 0 0 chr17 45897075 45897385 -43607168 - AluSg SINE Alu 0 310 1 364 215 192 52 chr17 45897437 45897475 -43607078 + MER113 DNA MER1_type? 171 202 -319 1612 119 22 41 chr17 45897475 45897743 -43606810 + AluSx SINE Alu 49 311 -1 364 215 192 52 chr17 45897743 45897876 -43606677 + MER113 DNA MER1_type? 202 366 -155 703 264 65 0 chr17 45897910 45898111 -43606442 - MIR SINE MIR -34 228 15 265 230 14 27 chr17 45898115 45898189 -43606364 + MER113 DNA MER1_type? 390 462 -59 339 236 54 74 chr17 45898233 45898381 -43606172 - MIR3 SINE MIR -48 160 16 1969 115 63 21 chr17 45899906 45900193 -43604360 + AluSx SINE Alu 1 299 -13 522 255 47 47 chr17 45900428 45900577 -43603976 + L2 LINE L2 1083 1231 -2083 954 195 6 23 chr17 45900578 45900752 -43603801 + AluJb SINE Alu 136 306 -6 1861 257 115 53 chr17 45900768 45900970 -43603583 + L2 LINE L2 1471 1659 -1655 2272 85 0 73 chr17 45900970 45901299 -43603254 - AluSq SINE Alu -8 305 1 1861 257 115 53 chr17 45901299 45902021 -43602532 + L2 LINE L2 1659 2452 -862 965 149 0 88 chr17 45902024 45902174 -43602379 + AluJb SINE Alu 133 266 -46 2035 164 3 3 chr17 45902174 45902485 -43602068 - AluSx SINE Alu -1 311 1 965 149 0 88 chr17 45902485 45902515 -43602038 + AluJb SINE Alu 266 297 -15 2264 120 0 0 chr17 45902525 45902824 -43601729 + AluSx SINE Alu 4 302 -10 916 256 97 91 chr17 45902834 45903401 -43601152 + L2 LINE L2 2457 3035 -278 2252 119 3 6 chr17 45903422 45903733 -43600820 + AluSg SINE Alu 1 310 0 2073 145 0 16 chr17 45903772 45904089 -43600464 + AluJb SINE Alu 1 312 0 1072 177 6 0 chr17 45904115 45904290 -43600263 + AluY SINE Alu 118 293 -18 690 281 137 40 chr17 45904290 45904735 -43599818 - MLT1G LTR MaLR -30 537 50 910 128 8 8 chr17 45904751 45904884 -43599669 - FLAM_C SINE Alu -5 138 6 2345 99 30 0 chr17 45904905 45905209 -43599344 - AluSq SINE Alu 0 313 1 310 236 42 0 chr17 45905215 45905287 -43599266 - MLT1G LTR MaLR -496 99 25 944 59 76 0 chr17 45905287 45905406 -43599147 + AluSg/x SINE Alu 158 285 -27 210 37 0 0 chr17 45905409 45905436 -43599117 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 190 176 0 39 chr17 45906429 45906480 -43598073 - L2 LINE L2 -553 2761 2713 30 36 0 18 chr17 45906579 45906607 -43597946 + AT_rich Low_complexity Low_complexity 1 29 -25 1853 183 0 0 chr17 45906607 45906908 -43597645 + AluJb SINE Alu 1 301 -11 30 36 0 18 chr17 45906908 45906934 -43597619 + AT_rich Low_complexity Low_complexity 29 54 0 1850 149 0 48 chr17 45907122 45907284 -43597269 - AluJb SINE Alu -17 295 154 2444 74 3 0 chr17 45907284 45907582 -43596971 - AluY SINE Alu -12 299 1 1850 149 0 48 chr17 45907582 45907728 -43596825 - AluJb SINE Alu -158 154 2 525 173 26 1 chr17 45907751 45907856 -43596697 - MLT1B LTR MaLR 0 390 296 1480 119 10 0 chr17 45907954 45908024 -43596529 - AluSq SINE Alu -110 203 135 2325 84 19 7 chr17 45908024 45908332 -43596221 - AluSp SINE Alu -1 312 1 1480 119 10 0 chr17 45908332 45908462 -43596091 - AluSq SINE Alu -178 135 1 265 297 19 45 chr17 45908463 45908618 -43595935 - L1ME LINE L1 -356 5765 5615 2429 69 7 7 chr17 45908618 45908922 -43595631 - AluY SINE Alu -7 304 1 1350 138 49 0 chr17 45908922 45909125 -43595428 - AluJb SINE Alu -13 299 87 2142 136 0 3 chr17 45909311 45909613 -43594940 - AluSq SINE Alu -12 301 1 597 216 42 42 chr17 45909615 45909678 -43594875 - L1ME4a LINE L1 -199 5922 5860 2328 52 45 7 chr17 45909678 45909969 -43594584 + AluY SINE Alu 1 302 -9 597 216 42 42 chr17 45909969 45910141 -43594412 - L1ME4a LINE L1 -260 5861 5687 358 22 0 0 chr17 45910164 45910210 -43594343 - MADE1 DNA Mariner 0 80 35 392 276 13 101 chr17 45910216 45910292 -43594261 - L1ME4a LINE L1 -479 5642 5561 2478 91 0 3 chr17 45910292 45910601 -43593952 - AluSx SINE Alu 0 312 5 392 276 13 101 chr17 45910601 45910750 -43593803 - L1ME4a LINE L1 -560 5561 5435 513 0 0 0 chr17 45910860 45910917 -43593636 + (TA)n Simple_repeat Simple_repeat 2 58 0 1067 143 0 23 chr17 45910921 45911096 -43593457 - FRAM SINE Alu 0 176 6 749 133 209 0 chr17 45911178 45911336 -43593217 + L1M3 LINE L1 5414 5604 -567 2493 53 0 0 chr17 45911353 45911668 -43592885 - AluY SINE Alu 0 315 1 2335 122 3 0 chr17 45911699 45912010 -43592543 + AluSx SINE Alu 1 312 0 414 277 44 78 chr17 45912898 45913104 -43591449 + L2 LINE L2 3073 3271 -1 622 271 90 5 chr17 45913708 45913896 -43590657 + MIR SINE MIR 33 236 -26 384 324 92 7 chr17 45914106 45914248 -43590305 - MIR SINE MIR -79 183 30 2283 101 3 23 chr17 45914478 45914786 -43589767 - AluSq SINE Alu -11 302 1 428 251 117 68 chr17 45914831 45915157 -43589396 - L1ME4a LINE L1 -177 5944 5603 1585 157 11 39 chr17 45915283 45915569 -43588984 + AluJo SINE Alu 35 312 0 316 377 74 19 chr17 45915578 45915793 -43588760 - L1ME4a LINE L1 -840 5306 5080 363 331 51 26 chr17 45916107 45916282 -43588271 + MIR SINE MIR 9 188 -61 2248 121 7 0 chr17 45917487 45917811 -43586742 - AluSx SINE Alu 0 326 1 242 219 12 110 chr17 45918233 45918326 -43586227 + MER91B DNA MER1_type 1 85 -55 2842 213 35 95 chr17 45918781 45918973 -43585580 + L1ME3A LINE L1 5180 5382 -788 2367 94 13 0 chr17 45918973 45919272 -43585281 + AluSg SINE Alu 1 303 -7 2842 213 35 95 chr17 45919272 45919593 -43584960 + L1ME3A LINE L1 5382 5721 -449 734 136 14 64 chr17 45919593 45919733 -43584820 + FLAM_C SINE Alu 1 133 0 2842 213 35 95 chr17 45919733 45919989 -43584564 + L1ME3A LINE L1 5721 5991 -179 2104 115 4 0 chr17 45919989 45920296 -43584257 + AluSg SINE Alu 1 308 0 2539 85 0 0 chr17 45920299 45920604 -43583949 + AluSx SINE Alu 3 307 -5 2842 213 35 95 chr17 45920604 45920866 -43583687 + L1ME3A LINE L1 5993 6170 0 848 184 14 0 chr17 45921067 45921208 -43583345 - AluJb SINE Alu -12 300 158 623 283 120 30 chr17 45921361 45921425 -43583128 - MLT1J LTR MaLR -2 509 452 897 221 0 31 chr17 45921425 45921620 -43582933 - MER5A DNA MER1_type 0 189 1 623 283 120 30 chr17 45921620 45921855 -43582698 - MLT1J LTR MaLR -59 452 183 802 179 0 8 chr17 45922253 45922387 -43582166 - FLAM_C SINE Alu 0 133 1 500 161 32 8 chr17 45922412 45922536 -43582017 + CT-rich Low_complexity Low_complexity 2 128 0 1736 170 40 0 chr17 45922543 45922843 -43581710 - AluJo SINE Alu 0 312 1 195 42 0 0 chr17 45923560 45923584 -43580969 + (TCTCCC)n Simple_repeat Simple_repeat 6 29 0 2430 103 0 0 chr17 45923959 45924271 -43580282 - AluSx SINE Alu 0 312 1 346 250 0 24 chr17 45924276 45924360 -43580193 + L1MC4 LINE L1 1995 2076 -4350 * 356 344 0 0 chr17 45924318 45924408 -43580145 - L1MC4 LINE L1 -1339 6703 6614 * 378 281 17 0 chr17 45924329 45924437 -43580116 + L1MC4 LINE L1 1996 6983 -1339 261 261 0 22 chr17 45924468 45924560 -43579993 + L1MC4 LINE L1 6614 6703 -1339 350 347 0 0 chr17 45924560 45924678 -43579875 + L1MC4 LINE L1 6614 6703 -1339 242 329 6 0 chr17 45924678 45924842 -43579711 + (CATATA)n Simple_repeat Simple_repeat 6 170 0 296 313 0 11 chr17 45924846 45925022 -43579531 + (TATATG)n Simple_repeat Simple_repeat 5 178 0 490 239 91 40 chr17 45925022 45925034 -43579519 - MIR SINE MIR -58 204 194 1553 178 73 7 chr17 45925034 45925188 -43579365 - AluJb SINE Alu -19 293 151 194 0 0 37 chr17 45925188 45925215 -43579338 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1553 178 73 7 chr17 45925215 45925335 -43579218 - AluJb SINE Alu -161 151 1 490 239 91 40 chr17 45925335 45925498 -43579055 - MIR SINE MIR -68 194 20 465 386 78 7 chr17 45925551 45925846 -43578707 + L3 LINE CR1 338 653 -924 334 211 105 21 chr17 45925864 45925959 -43578594 - L1ME4a LINE L1 -1 6120 6018 401 346 48 17 chr17 45926125 45926356 -43578197 - MIR SINE MIR -15 247 10 4022 62 69 22 chr17 45926519 45926936 -43577617 - LTR66 LTR ERVL 0 610 157 2269 121 0 3 chr17 45926936 45927249 -43577304 - AluSx SINE Alu 0 312 1 4022 62 69 22 chr17 45927249 45927414 -43577139 - LTR66 LTR ERVL -453 157 1 1696 167 24 27 chr17 45927623 45927748 -43576805 + AluJo SINE Alu 1 125 -187 2409 88 7 0 chr17 45927748 45928053 -43576500 + AluSc SINE Alu 1 307 -2 1696 167 24 27 chr17 45928053 45928221 -43576332 + AluJo SINE Alu 125 293 -19 1974 130 7 14 chr17 45928245 45928596 -43575957 + AluSx SINE Alu 1 349 0 263 253 0 13 chr17 45928599 45928674 -43575879 - L1ME1 LINE L1 -23 6143 6070 2819 214 66 18 chr17 45928676 45929174 -43575379 + L1MD2 LINE L1 4910 5383 -976 2241 130 0 0 chr17 45929174 45929473 -43575080 - AluSx SINE Alu -13 299 1 2819 214 66 18 chr17 45929473 45930107 -43574446 + L1MD2 LINE L1 5383 6104 -255 538 233 0 0 chr17 45930105 45930234 -43574319 - L1M4 LINE L1 -1251 4895 4767 * 1997 153 3 0 chr17 45930241 45930535 -43574018 - AluSx SINE Alu -17 295 1 1632 179 16 47 chr17 45930535 45930719 -43573834 - AluJo SINE Alu -4 308 137 2242 103 3 3 chr17 45930719 45931011 -43573542 + AluSg SINE Alu 1 292 -18 1632 179 16 47 chr17 45931011 45931144 -43573409 - AluJo SINE Alu -175 137 1 1241 201 102 43 chr17 45931157 45931221 -43573332 - L1M4 LINE L1 -2191 3955 3896 2393 98 3 3 chr17 45931221 45931527 -43573026 - AluSx SINE Alu -6 306 1 1241 201 102 43 chr17 45931527 45931640 -43572913 - L1M4 LINE L1 -2250 3896 3791 2171 132 0 0 chr17 45931640 45931935 -43572618 - AluSx SINE Alu -17 295 1 2200 135 0 0 chr17 45931935 45932231 -43572322 - AluSx SINE Alu -15 297 1 1241 201 102 43 chr17 45932231 45932424 -43572129 - L1M4 LINE L1 -2354 3792 3561 439 156 44 0 chr17 45932567 45932657 -43571896 - AluJ/FLAM SINE Alu -217 95 2 629 243 95 0 chr17 45933121 45933290 -43571263 - MIR SINE MIR -64 198 14 2338 115 0 0 chr17 45933436 45933740 -43570813 - AluSx SINE Alu -8 304 1 197 176 0 39 chr17 45933808 45933859 -43570694 + (TATG)n Simple_repeat Simple_repeat 4 52 0 849 248 26 13 chr17 45933901 45934135 -43570418 - L2 LINE L2 0 3313 3077 474 275 75 6 chr17 45934474 45934634 -43569919 + MIR SINE MIR 92 262 0 183 383 142 0 chr17 45934641 45934881 -43569672 - L2 LINE L2 -962 2352 2079 2330 116 7 0 chr17 45934943 45935253 -43569300 - AluSx SINE Alu 0 312 1 2296 114 0 0 chr17 45935265 45935562 -43568991 - AluSx SINE Alu -15 297 1 258 122 0 0 chr17 45935562 45935640 -43568913 + L1MA9 LINE L1 6264 6341 0 308 240 27 0 chr17 45935641 45935716 -43568837 - L1MC5 LINE L1 -1252 6709 6633 1190 71 0 0 chr17 45935942 45936083 -43568470 - AluSp/q SINE Alu -15 298 158 1696 74 5 0 chr17 45936089 45936292 -43568261 - AluSp SINE Alu -109 204 1 416 250 188 6 chr17 45936296 45936472 -43568081 - HAL1b LINE L1 -620 728 521 288 166 0 118 chr17 45936479 45936720 -43567833 + AluJo SINE Alu 40 302 0 1494 140 15 143 chr17 45936742 45937077 -43567476 - AluJb SINE Alu -20 292 1 718 81 15 37 chr17 45937086 45937222 -43567331 + (TTTC)n Simple_repeat Simple_repeat 4 136 0 2361 120 0 0 chr17 45937227 45937535 -43567018 - AluSx SINE Alu -4 308 1 1082 113 99 5 chr17 45938230 45938451 -43566102 + L1MA9 LINE L1 6070 6311 -1 912 274 47 0 chr17 45938498 45938732 -43565821 - MLT1J LTR MaLR -260 251 7 2253 79 62 3 chr17 45938937 45939227 -43565326 + AluSx SINE Alu 1 307 -5 452 263 82 107 chr17 45939249 45939332 -43565221 + MLT1J LTR MaLR 122 206 -305 1193 74 31 0 chr17 45939332 45939495 -43565058 - L1PA11 LINE L1 -2 6172 6005 1909 134 7 26 chr17 45939504 45939809 -43564744 - AluJo SINE Alu -1 311 13 452 263 82 107 chr17 45939809 45939897 -43564656 + MLT1J LTR MaLR 214 303 -208 2261 98 7 7 chr17 45939897 45940193 -43564360 - AluSx SINE Alu -16 296 1 2181 104 40 3 chr17 45940202 45940500 -43564053 - AluSq SINE Alu -4 309 1 452 263 82 107 chr17 45940500 45940661 -43563892 + MLT1J LTR MaLR 311 466 -45 2207 133 10 0 chr17 45941049 45941358 -43563195 - AluSx SINE Alu 0 312 1 259 164 254 0 chr17 45942012 45942079 -43562474 + MER58B DNA MER1_type 1 84 -257 2318 106 10 0 chr17 45942081 45942374 -43562179 + AluSx SINE Alu 1 296 -16 418 208 0 0 chr17 45942384 45942456 -43562097 + AluJ/FLAM SINE Alu 2 73 -239 800 214 46 82 chr17 45942467 45942748 -43561805 + MER58B DNA MER1_type 71 341 0 280 176 59 82 chr17 45942954 45943039 -43561514 - AluJ/FLAM SINE Alu -226 76 2 753 194 61 28 chr17 45943039 45943070 -43561483 + L2 LINE L2 3122 3151 -162 2159 110 4 0 chr17 45943070 45943385 -43561168 - AluSx SINE Alu 0 316 1 753 194 61 28 chr17 45943385 45943532 -43561021 + L2 LINE L2 3151 3307 -6 2329 97 10 0 chr17 45943544 45943842 -43560711 - AluSg SINE Alu -9 301 1 221 322 42 17 chr17 45945285 45945403 -43559150 + L3b LINE CR1 1368 1488 -95 295 269 206 34 chr17 45945738 45945913 -43558640 + MIR SINE MIR 44 248 -14 213 240 83 21 chr17 45947079 45947175 -43557378 - MIR SINE MIR -113 149 48 2227 105 0 10 chr17 45949210 45949515 -43555038 - AluSc SINE Alu -5 304 3 289 272 150 14 chr17 45949754 45949901 -43554652 + L2 LINE L2 2926 3092 -180 242 224 0 0 chr17 45950242 45950300 -43554253 + (TAA)n Simple_repeat Simple_repeat 1 58 0 424 244 114 55 chr17 45950366 45950620 -43553933 - MLT1J LTR MaLR -9 502 234 1064 204 288 125 chr17 45950629 45950992 -43553561 - MLT1H1 LTR MaLR -3 552 144 1460 152 52 103 chr17 45950992 45951267 -43553286 - MLT1B LTR MaLR -4 386 137 2403 85 0 0 chr17 45951267 45951562 -43552991 - AluSg SINE Alu -14 296 2 1460 152 52 103 chr17 45951562 45951693 -43552860 - MLT1B LTR MaLR -253 137 1 1064 204 288 125 chr17 45951693 45951865 -43552688 - MLT1H1 LTR MaLR -411 144 1 385 275 106 7 chr17 45951869 45952011 -43552542 - MLT1J LTR MaLR -284 227 72 28 0 0 0 chr17 45952019 45952047 -43552506 + AT_rich Low_complexity Low_complexity 1 28 0 2329 91 3 3 chr17 45952050 45952347 -43552206 - AluSq SINE Alu -16 297 1 240 340 58 0 chr17 45952477 45952580 -43551973 - MIR3 SINE MIR -40 168 60 1578 113 0 5 chr17 45952850 45953071 -43551482 - AluSq SINE Alu -18 295 76 338 304 61 15 chr17 45953539 45953705 -43550848 + MIR SINE MIR 16 182 -61 200 308 108 9 chr17 45953724 45953836 -43550717 + MIR SINE MIR 22 145 -63 1213 189 155 15 chr17 45953843 45954108 -43550445 + AluJo SINE Alu 1 302 0 3432 133 12 50 chr17 45954607 45954733 -43549820 - MER41B LTR ERV1 0 635 506 546 183 183 0 chr17 45954733 45954837 -43549716 + FLAM_C SINE Alu 1 123 -10 3432 133 12 50 chr17 45954837 45955130 -43549423 - MER41B LTR ERV1 -129 506 248 669 226 0 29 chr17 45955130 45955267 -43549286 + FLAM_A SINE Alu 1 133 0 3432 133 12 50 chr17 45955267 45955506 -43549047 - MER41B LTR ERV1 -387 248 1 2180 126 18 52 chr17 45955553 45955897 -43548656 + THE1C LTR MaLR 1 332 -43 2319 87 0 10 chr17 45955897 45956208 -43548345 - AluSx SINE Alu -4 308 1 2180 126 18 52 chr17 45956208 45956251 -43548302 + THE1C LTR MaLR 332 375 0 450 225 17 42 chr17 45956878 45956998 -43547555 - MIR SINE MIR -118 144 28 336 262 0 12 chr17 45957292 45957376 -43547177 + MIR SINE MIR 78 160 -102 242 286 0 51 chr17 45957398 45957507 -43547046 + MIR SINE MIR 41 145 -63 198 0 0 0 chr17 45959374 45959396 -43545157 + (CCCCAG)n Simple_repeat Simple_repeat 1 22 0 339 151 0 82 chr17 45960416 45960489 -43544064 + L3 LINE CR1 1395 1461 -116 2001 145 7 0 chr17 45960984 45961281 -43543272 - AluJo SINE Alu -13 299 1 22 35 0 0 chr17 45962288 45962317 -43542236 + GC_rich Low_complexity Low_complexity 1 29 0 210 91 0 0 chr17 45962320 45962353 -43542200 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 2329 88 0 0 chr17 45962781 45963088 -43541465 + AluSx SINE Alu 6 312 0 374 276 190 9 chr17 45963158 45963379 -43541174 + L2 LINE L2 2814 3074 -239 884 110 0 28 chr17 45963383 45963528 -43541025 + FLAM_C SINE Alu 1 141 -2 431 264 46 100 chr17 45963528 45963593 -43540960 + L2 LINE L2 3065 3132 -181 1729 190 7 0 chr17 45963593 45963903 -43540650 - AluJo SINE Alu 0 312 1 431 264 46 100 chr17 45963903 45964098 -43540455 + L2 LINE L2 3132 3311 -2 534 323 39 20 chr17 45965251 45965482 -43539071 + MIR SINE MIR 18 251 -11 2161 110 0 0 chr17 45965519 45965810 -43538743 - AluSg SINE Alu -19 291 1 1830 163 13 10 chr17 45965894 45966201 -43538352 + AluJb SINE Alu 1 308 -4 205 243 0 0 chr17 45966594 45966631 -43537922 + polypurine Low_complexity Low_complexity 1 37 0 187 286 191 38 chr17 45966850 45966955 -43537598 - MIR SINE MIR -61 147 27 414 302 56 0 chr17 45967384 45967510 -43537043 + L2 LINE L2 3139 3271 -1 196 140 18 35 chr17 45967513 45967570 -43536983 + GA-rich Low_complexity Low_complexity 1 56 0 2005 154 0 0 chr17 45968477 45968788 -43535765 + AluJo SINE Alu 1 311 -1 1773 75 115 12 chr17 45968828 45969116 -43535437 - AluSc SINE Alu 0 314 1 2150 121 3 0 chr17 45969991 45970296 -43534257 - AluSx SINE Alu -6 306 1 353 175 0 16 chr17 45970438 45970501 -43534052 + AluJb SINE Alu 104 165 -137 3125 122 22 19 chr17 45970501 45971042 -43533511 + LTR46-int LTR ERV1 6443 6985 0 3354 81 6 75 chr17 45971042 45971194 -43533359 + LTR46 LTR ERV1 1 162 -298 2228 118 0 9 chr17 45971194 45971509 -43533044 + AluSx SINE Alu 1 312 0 3354 81 6 75 chr17 45971509 45971850 -43532703 + LTR46 LTR ERV1 162 460 0 923 157 39 11 chr17 45971850 45972028 -43532525 + Tigger3(Golem) DNA MER2_type 2846 3028 -1 26 30 0 0 chr17 45972230 45972263 -43532290 + AT_rich Low_complexity Low_complexity 1 33 0 2488 59 0 0 chr17 45974061 45974366 -43530187 + AluY SINE Alu 1 305 -6 397 225 39 85 chr17 45978187 45978316 -43526237 + L1ME3 LINE L1 5840 5962 -208 1605 169 83 0 chr17 45978346 45978624 -43525929 - AluJo SINE Alu -11 301 1 2062 105 0 11 chr17 45978629 45978959 -43525594 - AluSx SINE Alu 0 327 1 232 239 0 87 chr17 45978983 45979075 -43525478 + L1ME3 LINE L1 5954 6037 -125 4619 125 22 44 chr17 45979385 45980187 -43524366 - LTR1 LTR ERV1 0 785 1 300 200 0 0 chr17 45980215 45980270 -43524283 - HUERS-P2 LTR ERV1 0 3088 3034 1866 107 64 55 chr17 45980270 45980597 -43523956 + L1PA14 LINE L1 5832 6161 0 2381 69 0 13 chr17 45980604 45980908 -43523645 + AluY SINE Alu 1 300 -11 243 265 0 0 chr17 45980938 45981006 -43523547 + A-rich Low_complexity Low_complexity 1 68 0 414 176 14 0 chr17 45981019 45981093 -43523460 - MER21B LTR ERV1 -776 87 13 260 224 0 15 chr17 45981118 45981185 -43523368 - LTR33A LTR ERVL -15 508 443 204 338 15 0 chr17 45981782 45981850 -43522703 - L2 LINE L2 -2885 429 361 1876 125 40 26 chr17 45981852 45982156 -43522397 - AluSx SINE Alu -4 308 1 813 161 8 0 chr17 45982328 45982458 -43522095 - FLAM_C SINE Alu 0 133 3 225 265 108 0 chr17 45982927 45983029 -43521524 + MLT1J LTR MaLR 377 489 -22 443 257 7 7 chr17 45983300 45983436 -43521117 - MLT1H LTR MaLR -319 230 95 2529 126 38 72 chr17 45983768 45984398 -43520155 - MER4B LTR ERV1 0 779 1 1318 144 93 57 chr17 45984692 45985025 -43519528 - LTR8A LTR ERV1 0 727 383 322 270 0 0 chr17 45985467 45985541 -43519012 - MER5B DNA MER1_type -14 164 91 646 204 0 29 chr17 45985567 45985704 -43518849 + FLAM_A SINE Alu 1 133 0 342 306 46 9 chr17 45985704 45985812 -43518741 - L2 LINE L2 -22 3250 3139 200 193 68 102 chr17 45985940 45986028 -43518525 - MIR3 SINE MIR -30 178 94 462 268 0 0 chr17 45986437 45986534 -43518019 + MIR SINE MIR 66 162 -100 372 226 69 10 chr17 45986558 45986660 -43517893 + MIR SINE MIR 28 135 -127 196 350 146 0 chr17 45987194 45987317 -43517236 - MIR SINE MIR -41 221 81 716 208 4 4 chr17 45987431 45988006 -43516547 + (TG)n Simple_repeat Simple_repeat 1 575 0 756 133 9 9 chr17 45988351 45988494 -43516059 - FLAM_A SINE Alu 0 146 4 498 227 25 8 chr17 45988932 45989051 -43515502 - MIR SINE MIR -110 152 32 410 163 54 0 chr17 45989409 45989501 -43515052 + Charlie7 DNA MER1_type 1 97 -2515 1840 155 0 14 chr17 45989514 45989804 -43514749 + AluJb SINE Alu 1 286 -26 28 29 0 0 chr17 45989808 45989843 -43514710 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr17 45989911 45989934 -43514619 + AT_rich Low_complexity Low_complexity 1 23 0 2167 108 0 0 chr17 45989952 45990248 -43514305 - AluSx SINE Alu -16 296 1 261 0 0 0 chr17 45990252 45990281 -43514272 + (T)n Simple_repeat Simple_repeat 1 29 0 182 246 127 118 chr17 45990855 45990965 -43513588 + L2 LINE L2 3191 3301 -12 2402 90 3 0 chr17 45991395 45991707 -43512846 + AluSp SINE Alu 1 313 0 1656 118 115 21 chr17 45992029 45992308 -43512245 - AluJb SINE Alu -7 305 1 1960 145 0 25 chr17 45995550 45995867 -43508686 - AluJb SINE Alu -3 309 1 301 274 26 45 chr17 45995965 45996121 -43508432 + MIR SINE MIR 30 134 -74 200 300 0 0 chr17 45996914 45996964 -43507589 + MIR SINE MIR 94 143 -119 1715 175 24 0 chr17 45997057 45997349 -43507204 - AluJb SINE Alu -13 299 1 201 298 119 0 chr17 45997360 45997444 -43507109 + MIR3 SINE MIR 67 160 -48 2194 93 33 0 chr17 45997457 45997757 -43506796 - AluSx SINE Alu -2 310 1 523 245 68 18 chr17 46001181 46001344 -43503209 - MIR3 SINE MIR -2 206 36 2505 86 0 3 chr17 46001484 46001797 -43502756 - AluSx SINE Alu 0 312 1 1620 141 9 0 chr17 46001798 46002025 -43502528 - AluSx SINE Alu -30 282 54 346 284 127 20 chr17 46002945 46003142 -43501411 - L2 LINE L2 -181 3091 2874 2249 100 4 0 chr17 46003255 46003560 -43500993 - AluSp SINE Alu 0 307 2 532 261 0 8 chr17 46004959 46005093 -43499460 + FLAM_A SINE Alu 1 133 0 631 146 9 9 chr17 46005129 46005239 -43499314 + L2 LINE L2 3204 3313 0 1852 173 7 7 chr17 46005352 46005658 -43498895 + AluJb SINE Alu 6 311 -1 1720 177 17 31 chr17 46005810 46006104 -43498449 - AluJo SINE Alu -22 290 1 2182 80 15 109 chr17 46006123 46006315 -43498238 - AluSg SINE Alu -4 306 97 243 0 0 0 chr17 46006315 46006342 -43498211 + (TA)n Simple_repeat Simple_repeat 1 27 0 2326 99 0 0 chr17 46006342 46006624 -43497929 - AluSc SINE Alu -27 282 1 2182 80 15 109 chr17 46006624 46006768 -43497785 - AluSg SINE Alu -211 99 1 2028 118 39 18 chr17 46006927 46007257 -43497296 - MER1B DNA MER1_type 0 337 1 227 395 23 11 chr17 46007257 46007434 -43497119 - L1ME LINE L1 -365 5799 5621 236 253 93 40 chr17 46007709 46007724 -43496829 - L2 LINE L2 -2 3311 3298 486 0 0 0 chr17 46007724 46007778 -43496775 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 236 253 93 40 chr17 46007778 46007837 -43496716 - L2 LINE L2 -15 3298 3233 230 244 47 35 chr17 46008211 46008297 -43496256 + MLT1H LTR MaLR 18 104 -445 227 253 222 30 chr17 46008882 46008981 -43495572 + MIR SINE MIR 16 133 -75 22 0 0 0 chr17 46008986 46009008 -43495545 + AT_rich Low_complexity Low_complexity 1 22 0 890 145 0 36 chr17 46009009 46009147 -43495406 - AluJb SINE Alu -179 133 1 2317 69 31 10 chr17 46009232 46009522 -43495031 - AluSx SINE Alu -16 296 1 537 288 164 46 chr17 46009730 46010119 -43494434 - MLT1H LTR MaLR 0 549 115 2615 65 0 0 chr17 46010649 46010955 -43493598 + AluY SINE Alu 1 306 -5 2354 93 7 0 chr17 46011100 46011400 -43493153 + AluSx SINE Alu 1 302 -10 2028 139 7 3 chr17 46011535 46011829 -43492724 + AluSx SINE Alu 1 295 -17 263 231 218 0 chr17 46012578 46012656 -43491897 - MIR SINE MIR -8 254 160 558 244 39 50 chr17 46012687 46012945 -43491608 - L1MC5 LINE L1 -50 7911 7657 30 0 0 0 chr17 46012968 46012998 -43491555 + AT_rich Low_complexity Low_complexity 1 30 0 650 107 146 0 chr17 46012998 46013101 -43491452 - FLAM_C SINE Alu -15 118 1 1941 245 48 43 chr17 46013106 46013367 -43491186 + L1MC4a LINE L1 4901 5159 -1412 1494 173 0 96 chr17 46013367 46013690 -43490863 - AluJo SINE Alu -20 292 1 1941 245 48 43 chr17 46013690 46014348 -43490205 + L1MC4a LINE L1 5159 5824 -747 645 92 0 0 chr17 46014378 46014465 -43490088 + AluSg/x SINE Alu 201 287 -23 235 203 0 210 chr17 46014485 46014623 -43489930 + L1MC4a LINE L1 5823 5931 -1877 2152 117 10 0 chr17 46014632 46014932 -43489621 - AluSx SINE Alu -9 303 1 747 88 0 0 chr17 46014932 46015034 -43489519 - L1PB2 LINE L1 -59 6092 5991 1814 230 141 32 chr17 46015079 46015617 -43488936 + L1MC4a LINE L1 6409 7046 -762 2329 105 0 7 chr17 46015617 46015923 -43488630 - AluSq SINE Alu -9 304 1 1814 230 141 32 chr17 46015923 46016100 -43488453 + L1MC4a LINE L1 7046 7202 -606 1104 240 22 73 chr17 46016111 46016242 -43488311 + L1MC4 LINE L1 7436 7572 -470 756 180 8 0 chr17 46016242 46016370 -43488183 + FLAM_C SINE Alu 1 129 -4 1104 240 22 73 chr17 46016370 46016730 -43487823 + L1MC4 LINE L1 7572 7902 -140 193 299 339 8 chr17 46016935 46017062 -43487491 + MIR3 SINE MIR 22 190 -18 192 277 143 17 chr17 46021634 46021753 -43482800 - MIR3 SINE MIR -71 137 4 321 317 233 0 chr17 46022396 46022576 -43481977 + MIR SINE MIR 22 243 -19 297 128 0 0 chr17 46024075 46024122 -43480431 + (TG)n Simple_repeat Simple_repeat 2 48 0 2079 136 58 0 chr17 46025603 46025948 -43478605 + L1P4 LINE L1 5329 5693 -473 235 175 0 0 chr17 46025948 46025988 -43478565 - LTR3b LTR ERVK -63 437 398 2580 94 85 14 chr17 46025988 46026401 -43478152 - LTR3b LTR ERVK -58 442 1 1737 165 31 16 chr17 46026439 46026909 -43477644 - HERVK14 LTR ERVK -366 5579 2995 * 5625 166 19 2 chr17 46026908 46027876 -43476677 - HERVK14 LTR ERVK -4934 2309 1326 492 254 0 26 chr17 46027868 46027982 -43476571 - HERVK14 LTR ERVK -6561 682 572 * 1086 160 30 5 chr17 46028033 46028233 -43476320 - HERVK14 LTR ERVK -6971 272 68 2417 139 36 10 chr17 46028345 46028763 -43475790 - LTR3 LTR ERVK 0 429 1 2551 123 14 80 chr17 46028764 46028908 -43475645 + L1PA16 LINE L1 5688 5840 -326 2206 92 0 20 chr17 46028908 46029200 -43475353 + AluSx SINE Alu 22 307 -5 2551 123 14 80 chr17 46029200 46029417 -43475136 + L1PA16 LINE L1 5840 6009 -157 2366 85 0 0 chr17 46029417 46029720 -43474833 + AluSx SINE Alu 1 303 0 2551 123 14 80 chr17 46029720 46029866 -43474687 + L1PA16 LINE L1 6009 6163 -3 280 269 39 0 chr17 46029933 46030011 -43474542 + MIR SINE MIR 61 141 -67 477 226 29 0 chr17 46030557 46030659 -43473894 + MER5B DNA MER1_type 1 105 -73 240 349 121 0 chr17 46030672 46030804 -43473749 - MLT1J2 LTR MaLR -34 416 269 2318 99 0 32 chr17 46030804 46031118 -43473435 - AluSg SINE Alu -6 304 1 1940 165 3 3 chr17 46031172 46031475 -43473078 - AluJo SINE Alu -9 303 1 3251 173 34 13 chr17 46031476 46031538 -43473015 + MER54A LTR ERVL 20 79 -822 2270 124 3 10 chr17 46031538 46031852 -43472701 - AluSx SINE Alu 0 312 1 3251 173 34 13 chr17 46031852 46032477 -43472076 + MER54A LTR ERVL 79 901 0 670 206 7 14 chr17 46032485 46032626 -43471927 + MLT1A1 LTR MaLR 225 364 -1 2682 180 72 120 chr17 46032626 46033968 -43470585 + L1ME LINE L1 4495 5762 -404 693 201 1 55 chr17 46033966 46034135 -43470418 + L1MA10 LINE L1 5983 6301 -33 * 2387 87 3 0 chr17 46034135 46034434 -43470119 - AluSq SINE Alu -13 300 1 693 201 1 55 chr17 46034434 46034464 -43470089 + L1MA10 LINE L1 6301 6331 -3 2100 119 25 3 chr17 46035225 46035511 -43469042 + AluSx SINE Alu 7 298 -14 1064 288 54 30 chr17 46036561 46036691 -43467862 + L1ME4a LINE L1 5535 5660 -461 2167 134 13 0 chr17 46036691 46036997 -43467556 + AluSx SINE Alu 1 310 -2 1064 288 54 30 chr17 46036997 46037425 -43467128 + L1ME4a LINE L1 5660 6106 -15 2140 125 30 10 chr17 46037442 46037747 -43466806 + AluSx SINE Alu 1 311 -1 317 264 88 25 chr17 46038200 46038359 -43466194 - MER5A DNA MER1_type 0 189 21 280 227 2 0 chr17 46039813 46039873 -43464680 + MIR SINE MIR 93 146 -62 373 296 24 8 chr17 46040451 46040576 -43463977 - MIR SINE MIR -134 128 2 837 165 0 0 chr17 46040727 46040848 -43463705 + FLAM_C SINE Alu 3 123 -20 500 288 112 0 chr17 46041672 46041842 -43462711 + MIR SINE MIR 60 248 -14 477 233 25 8 chr17 46042974 46043094 -43461459 + MIR SINE MIR 20 141 -67 197 179 164 15 chr17 46043126 46043193 -43461360 - MER5A DNA MER1_type -63 126 50 229 164 14 123 chr17 46043227 46043300 -43461253 + MIR3 SINE MIR 138 202 -6 409 216 39 10 chr17 46043971 46044073 -43460480 - MER5A DNA MER1_type -77 112 8 524 243 127 28 chr17 46044248 46044429 -43460124 + MIR SINE MIR 59 257 -5 765 212 127 14 chr17 46044440 46044652 -43459901 + MER33 DNA MER1_type 1 236 -88 1154 144 0 0 chr17 46044658 46044831 -43459722 + FRAM SINE Alu 4 176 0 394 200 0 0 chr17 46044831 46044926 -43459627 + MER33 DNA MER1_type 261 355 -8 425 221 0 0 chr17 46044941 46045027 -43459526 - MIR SINE MIR -131 131 46 644 274 167 0 chr17 46045751 46045955 -43458598 + MIR SINE MIR 23 260 -2 308 325 178 0 chr17 46046521 46046684 -43457869 + MER91A DNA MER1_type 1 192 -4 310 295 71 0 chr17 46047507 46047619 -43456934 + MIR SINE MIR 21 140 -122 2282 103 3 28 chr17 46048247 46048566 -43455987 + AluSq SINE Alu 1 311 -2 372 330 43 0 chr17 46048589 46048798 -43455755 + L2 LINE L2 2835 3052 -220 576 40 6 5 chr17 46048944 46049119 -43455434 + AluY SINE Alu 39 306 -5 1121 149 112 14 chr17 46049284 46049499 -43455054 - MER46A DNA MER2_type 0 236 1 307 255 31 43 chr17 46049516 46049598 -43454955 - L1M4 LINE L1 -1897 4249 4168 2454 85 0 3 chr17 46049598 46049905 -43454648 - AluSg1 SINE Alu -1 308 3 307 255 31 43 chr17 46049905 46049983 -43454570 - L1M4 LINE L1 -1978 4168 4091 1625 200 3 28 chr17 46049984 46050278 -43454275 + AluJb SINE Alu 1 288 -24 285 29 0 0 chr17 46050278 46050312 -43454241 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1625 200 3 28 chr17 46050312 46050337 -43454216 + AluJb SINE Alu 288 312 0 447 183 134 94 chr17 46050401 46050603 -43453950 - MER63A DNA MER1_type 0 210 1 525 227 17 8 chr17 46051009 46051128 -43453425 + MIR SINE MIR 41 160 -102 199 221 118 0 chr17 46051609 46051677 -43452876 + MIR SINE MIR 22 97 -165 2123 116 0 0 chr17 46052484 46052799 -43451754 - AluY SINE Alu 0 311 3 1057 160 94 0 chr17 46052799 46052960 -43451593 - AluJb SINE Alu -16 296 115 261 0 0 0 chr17 46052960 46052989 -43451564 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1057 160 94 0 chr17 46052989 46053008 -43451545 - AluJb SINE Alu -197 115 99 1160 241 126 20 chr17 46053805 46054249 -43450304 + Charlie4a DNA MER1_type 2 492 -16 371 264 26 77 chr17 46054565 46054720 -43449833 - L1ME4a LINE L1 0 6121 5975 226 185 74 0 chr17 46054832 46054886 -43449667 + MER20B DNA MER1_type 64 121 -662 2319 104 3 3 chr17 46055008 46055306 -43449247 + AluSp SINE Alu 1 298 -15 1918 142 10 7 chr17 46055309 46055611 -43448942 - AluJo SINE Alu -9 303 1 802 254 12 12 chr17 46055730 46055974 -43448579 + MER20B DNA MER1_type 509 752 -31 1128 165 27 49 chr17 46056524 46056684 -43447869 - MER20B DNA MER1_type 0 219 57 1982 157 3 7 chr17 46056684 46056990 -43447563 + AluJb SINE Alu 1 305 -7 2556 52 0 16 chr17 46056990 46057297 -43447256 + AluY SINE Alu 1 302 -9 1128 165 27 49 chr17 46057297 46057359 -43447194 - MER20B DNA MER1_type -160 59 1 1212 99 129 0 chr17 46057433 46057634 -43446919 + MER30 DNA MER1_type 4 230 0 297 186 116 0 chr17 46057903 46058032 -43446521 + (GAGTG)n Simple_repeat Simple_repeat 3 146 0 * 439 202 23 31 chr17 46057987 46058372 -43446181 + GA-rich Low_complexity Low_complexity 1 381 0 456 255 33 18 chr17 46058547 46058711 -43445842 + MLT1J2 LTR MaLR 273 391 -18 2061 86 111 7 chr17 46058842 46059122 -43445431 - AluSx SINE Alu -3 309 1 1513 158 0 0 chr17 46059282 46059548 -43445005 + L1MD3 LINE L1 7730 7995 0 908 112 16 0 chr17 46059558 46059683 -43444870 + AluJb SINE Alu 171 297 -15 324 306 88 59 chr17 46060032 46060202 -43444351 + L1MEd LINE L1 586 760 -5359 1220 163 0 0 chr17 46060357 46060547 -43444006 + AluSg/x SINE Alu 118 307 -3 465 333 96 11 chr17 46061179 46061440 -43443113 - L1ME LINE L1 -495 5626 5344 2559 39 0 0 chr17 46061711 46062030 -43442523 + AluY SINE Alu 1 319 0 1184 114 6 0 chr17 46062030 46062197 -43442356 + AluSg/x SINE Alu 134 301 -11 427 136 0 0 chr17 46062272 46062338 -43442215 - AluS SINE Alu -246 67 2 1775 171 7 0 chr17 46062398 46062690 -43441863 - AluJo SINE Alu -18 294 1 758 336 53 80 chr17 46062711 46062854 -43441699 - L1ME LINE L1 -1242 4904 4759 1799 151 11 0 chr17 46062854 46063119 -43441434 - AluJo SINE Alu -22 290 23 758 336 53 80 chr17 46063119 46063558 -43440995 - L1ME LINE L1 -1387 4759 4333 2498 82 0 0 chr17 46063558 46063863 -43440690 - AluSc SINE Alu -4 305 1 758 336 53 80 chr17 46063863 46063902 -43440651 - L1ME LINE L1 -1813 4333 4294 419 142 13 84 chr17 46063906 46064027 -43440526 - L1ME1 LINE L1 -339 5827 5741 342 167 0 107 chr17 46064027 46064111 -43440442 + MLT1A1 LTR MaLR 122 196 -169 2516 82 0 0 chr17 46064131 46064437 -43440116 - AluY SINE Alu -5 306 1 834 195 70 16 chr17 46064450 46064635 -43439918 + MLT1A1 LTR MaLR 171 365 0 851 146 44 24 chr17 46064635 46064875 -43439678 - L1ME1 LINE L1 -729 5433 5188 1961 156 0 25 chr17 46064887 46065207 -43439346 - AluJb SINE Alu 0 312 1 421 108 0 0 chr17 46065229 46065341 -43439212 - AluSg/x SINE Alu 0 325 214 1261 86 0 0 chr17 46065341 46065493 -43439060 - AluY SINE Alu -159 152 1 2269 112 0 13 chr17 46065493 46065797 -43438756 - AluSx SINE Alu -12 300 1 307 102 17 0 chr17 46065798 46065857 -43438696 - L1ME1 LINE L1 -960 5186 5127 986 164 26 26 chr17 46065871 46066060 -43438493 - AluJo SINE Alu -8 304 116 558 284 40 0 chr17 46066060 46066236 -43438317 - L1ME1 LINE L1 -1055 5091 4909 401 158 40 0 chr17 46066356 46066432 -43438121 + MER5A DNA MER1_type 12 90 -99 356 271 37 9 chr17 46067173 46067280 -43437273 + L2 LINE L2 3159 3268 -4 210 210 37 25 chr17 46067472 46067553 -43437000 + C-rich Low_complexity Low_complexity 4 85 0 21 57 0 0 chr17 46067695 46067730 -43436823 + GC_rich Low_complexity Low_complexity 1 35 0 219 203 40 14 chr17 46067793 46067867 -43436686 + (CCCCG)n Simple_repeat Simple_repeat 1 76 0 204 67 0 0 chr17 46068009 46068039 -43436514 + (CGGGG)n Simple_repeat Simple_repeat 3 32 0 328 348 52 0 chr17 46068511 46068666 -43435887 + MIR SINE MIR 100 262 0 367 311 82 16 chr17 46070126 46070248 -43434305 + MIR SINE MIR 14 143 -119 626 285 6 17 chr17 46070250 46070429 -43434124 + MIR SINE MIR 32 208 -54 259 221 65 13 chr17 46071280 46071357 -43433196 - MER91A DNA MER1_type -115 81 1 962 239 28 0 chr17 46071371 46071589 -43432964 + MER58A DNA MER1_type 1 224 0 199 150 0 25 chr17 46071826 46071866 -43432687 + MIR SINE MIR 107 145 -117 433 291 165 30 chr17 46072117 46072347 -43432206 - MIR SINE MIR 0 262 2 322 200 86 48 chr17 46072611 46072716 -43431837 + MIR SINE MIR 34 142 -120 929 145 0 0 chr17 46073207 46073338 -43431215 + AluSq/x SINE Alu 1 131 -182 323 130 0 0 chr17 46073338 46073384 -43431169 + AluSc SINE Alu 203 248 -51 1112 172 8 71 chr17 46073384 46073446 -43431107 + AluJo SINE Alu 85 149 -163 2426 93 3 3 chr17 46073446 46073756 -43430797 + AluSp SINE Alu 1 310 -3 1112 172 8 71 chr17 46073756 46073931 -43430622 + AluJo SINE Alu 149 307 -5 415 281 183 0 chr17 46074261 46074414 -43430139 - MER5A DNA MER1_type 0 189 9 393 327 48 8 chr17 46074576 46074728 -43429825 + MIR SINE MIR 5 165 -43 350 299 11 1 chr17 46075277 46075389 -43429164 + MIR SINE MIR 37 148 -69 2300 110 10 3 chr17 46075689 46075999 -43428554 + AluSq SINE Alu 1 312 -1 21 36 0 0 chr17 46076532 46076560 -43427993 + AT_rich Low_complexity Low_complexity 1 28 0 229 239 0 0 chr17 46077184 46077230 -43427323 - L2 LINE L2 -24 3289 3244 1590 201 83 43 chr17 46077576 46077995 -43426558 - LTR16C LTR ERVL -3 488 53 235 359 33 16 chr17 46078078 46078262 -43426291 - L2 LINE L2 -575 2739 2553 315 0 0 0 chr17 46080121 46080156 -43424397 + (TG)n Simple_repeat Simple_repeat 2 36 0 2211 105 35 0 chr17 46080157 46080443 -43424110 - AluSx SINE Alu -16 296 1 1909 147 10 13 chr17 46080514 46080836 -43423717 + AluJo SINE Alu 1 312 0 255 246 24 138 chr17 46081138 46081305 -43423248 - L2 LINE L2 -93 3179 3032 292 313 55 37 chr17 46081311 46081474 -43423079 - L1ME LINE L1 -343 5778 5613 503 214 269 0 chr17 46081564 46081709 -43422844 + MER5A DNA MER1_type 1 184 -5 2286 81 7 36 chr17 46081812 46082119 -43422434 - AluSx SINE Alu -14 298 1 718 162 0 153 chr17 46083125 46083347 -43421206 + MER53 DNA DNA 2 189 0 1332 172 19 42 chr17 46085129 46085390 -43419163 - AluJo SINE Alu -3 309 55 1999 143 7 13 chr17 46085410 46085710 -43418843 - AluJb SINE Alu -14 298 1 320 250 71 20 chr17 46085710 46086095 -43418458 - L1MD3 LINE L1 -7 8034 7634 392 145 0 34 chr17 46086097 46086181 -43418372 - MIR SINE MIR -62 146 74 753 272 28 9 chr17 46087350 46087567 -43416986 - MIR SINE MIR -33 229 9 458 269 120 0 chr17 46088105 46088272 -43416281 - L2 LINE L2 -213 3059 2873 2393 97 10 0 chr17 46088870 46089179 -43415374 + AluSp SINE Alu 2 313 0 489 303 73 23 chr17 46089201 46089419 -43415134 + MIR SINE MIR 2 230 -32 2569 67 0 0 chr17 46090864 46091164 -43413389 - AluY SINE Alu -11 300 1 905 135 0 0 chr17 46092656 46092789 -43411764 - FLAM_C SINE Alu 0 133 1 1766 191 0 13 chr17 46092789 46093088 -43411465 - AluJo SINE Alu -17 295 1 2033 141 3 35 chr17 46093143 46093462 -43411091 + AluJb SINE Alu 1 309 -3 2253 110 0 3 chr17 46093494 46093793 -43410760 + AluSx SINE Alu 6 303 -9 2237 120 7 0 chr17 46093854 46094153 -43410400 + AluSq SINE Alu 1 301 -12 348 196 40 151 chr17 46094171 46094296 -43410257 + L1ME4a LINE L1 5715 5812 -309 2397 95 0 13 chr17 46094296 46094611 -43409942 + AluSx SINE Alu 1 311 -1 348 196 40 151 chr17 46094611 46094684 -43409869 + L1ME4a LINE L1 5812 5891 -230 4309 168 65 16 chr17 46094798 46095718 -43408835 - L1MB7 LINE L1 -9 6175 5156 1979 117 7 11 chr17 46095718 46095999 -43408554 - AluSq SINE Alu -5 308 29 4309 168 65 16 chr17 46095999 46096559 -43407994 - L1MB7 LINE L1 -1028 5156 4625 387 298 23 47 chr17 46096921 46097092 -43407461 - MER5A DNA MER1_type -16 173 7 430 216 5 10 chr17 46099065 46099170 -43405383 - MIR3 SINE MIR -10 198 93 599 270 53 68 chr17 46100043 46100234 -43404319 - MIR SINE MIR -2 260 73 1877 159 30 14 chr17 46100234 46100530 -43404023 + AluJb SINE Alu 1 301 -11 599 270 53 68 chr17 46100530 46100601 -43403952 - MIR SINE MIR -189 73 2 2032 87 7 52 chr17 46101076 46101362 -43403191 + AluSx SINE Alu 19 291 -21 994 119 22 0 chr17 46101686 46101820 -43402733 + AluJo SINE Alu 1 137 -175 2249 125 0 0 chr17 46101832 46102129 -43402424 + AluSx SINE Alu 13 309 -3 40028 64 8 2 chr17 46102146 46108247 -43396306 + L1PA5 LINE L1 1 6135 -19 1229 128 17 6 chr17 46108247 46108426 -43396127 + AluJo SINE Alu 117 297 -15 322 260 0 0 chr17 46108871 46108948 -43395605 - MER117 DNA MER1_type -10 187 111 2092 119 18 3 chr17 46109440 46109748 -43394805 - AluSq SINE Alu 0 312 1 2828 145 56 53 chr17 46109871 46110422 -43394131 + MER52A LTR ERV1 1203 1755 0 1681 186 89 48 chr17 46110428 46110970 -43393583 + L1MD2 LINE L1 1516 2079 -4461 307 129 0 43 chr17 46110970 46111040 -43393513 + (GGGGA)n Simple_repeat Simple_repeat 2 68 0 2173 144 0 44 chr17 46111092 46111436 -43393117 - MER47A DNA MER2_type -1957 366 39 2640 40 0 0 chr17 46111436 46111732 -43392821 + AluY SINE Alu 2 297 -14 2173 144 0 44 chr17 46111732 46111770 -43392783 - MER47A DNA MER2_type -2284 39 1 2204 236 50 20 chr17 46111770 46111967 -43392586 + L1MD2 LINE L1 2614 2804 -3736 1919 136 0 41 chr17 46111967 46112262 -43392291 + AluJb SINE Alu 16 298 -14 2204 236 50 20 chr17 46112262 46112718 -43391835 + L1MD2 LINE L1 2804 3287 -3253 186 380 44 9 chr17 46112718 46112831 -43391722 - L2 LINE L2 -497 2817 2701 180 97 0 0 chr17 46112961 46112992 -43391561 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 274 284 34 23 chr17 46113010 46113098 -43391455 - L2 LINE L2 -823 2491 2403 1108 104 33 11 chr17 46113142 46113325 -43391228 - L1MD1 LINE L1 0 6242 6056 479 269 30 6 chr17 46113325 46113492 -43391061 + L1MD2 LINE L1 5526 5696 -844 2307 102 0 0 chr17 46113495 46113806 -43390747 + AluSx SINE Alu 1 311 0 2269 210 82 15 chr17 46113811 46114397 -43390156 + L1MD2 LINE L1 6119 6743 -10 2261 168 50 54 chr17 46114405 46114823 -43389730 + MLT2B3 LTR ERVL 1 418 -136 2213 154 74 59 chr17 46114823 46115039 -43389514 + MER66B LTR ERV1 1 212 -274 2537 64 0 3 chr17 46115039 46115337 -43389216 + AluSg SINE Alu 1 297 -13 2213 154 74 59 chr17 46115337 46115595 -43388958 + MER66B LTR ERV1 212 482 -4 2261 168 50 54 chr17 46115595 46115712 -43388841 + MLT2B3 LTR ERVL 418 534 -20 206 118 0 0 chr17 46115712 46115746 -43388807 + (TC)n Simple_repeat Simple_repeat 2 35 0 246 211 0 0 chr17 46115746 46115798 -43388755 + MLT2B3 LTR ERVL 503 554 0 383 258 21 10 chr17 46117813 46117910 -43386643 - MER5B DNA MER1_type -80 98 1 273 345 115 14 chr17 46118083 46118231 -43386322 + L2 LINE L2 3101 3263 -9 1454 176 125 15 chr17 46118269 46118598 -43385955 + MLT1A1 LTR MaLR 1 365 0 1972 109 39 7 chr17 46119137 46119421 -43385132 + AluSc SINE Alu 1 293 -16 197 264 97 0 chr17 46119750 46119822 -43384731 - L2 LINE L2 -507 2807 2729 396 293 86 21 chr17 46120720 46120860 -43383693 - MIR3 SINE MIR -30 178 30 211 275 72 0 chr17 46121023 46121092 -43383461 + L2 LINE L2 3238 3311 -2 * 336 259 102 0 chr17 46121091 46121199 -43383354 - MIR SINE MIR -7 255 137 37 93 0 0 chr17 46121668 46121775 -43382778 + GC_rich Low_complexity Low_complexity 1 107 0 2158 53 0 60 chr17 46122620 46122902 -43381651 - AluSg SINE Alu -43 267 3 32 0 0 0 chr17 46122912 46122944 -43381609 + AT_rich Low_complexity Low_complexity 1 32 0 234 207 52 17 chr17 46123147 46123205 -43381348 - MIR3 SINE MIR -50 158 99 235 149 128 0 chr17 46123366 46123413 -43381140 - L2 LINE L2 -2 3270 3218 2360 85 3 0 chr17 46123489 46123782 -43380771 + AluSq SINE Alu 1 294 -19 230 270 32 48 chr17 46124318 46124444 -43380109 + MIR3 SINE MIR 3 126 -82 216 0 0 0 chr17 46124617 46124641 -43379912 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2109 101 11 28 chr17 46124643 46124930 -43379623 - AluSx SINE Alu -30 282 1 457 252 43 0 chr17 46125098 46125213 -43379340 - L2 LINE L2 -3 3310 3191 835 266 51 5 chr17 46125253 46125467 -43379086 - MIR SINE MIR -33 229 6 266 264 171 31 chr17 46125539 46125731 -43378822 - L2 LINE L2 -262 3010 2798 301 206 127 105 chr17 46126344 46126572 -43377981 - MLT1L LTR MaLR -59 556 324 2410 66 3 41 chr17 46126626 46126944 -43377609 - AluSp SINE Alu -7 306 1 862 176 0 0 chr17 46126948 46127079 -43377474 - FLAM_A SINE Alu -1 132 2 202 219 271 0 chr17 46127908 46128004 -43376549 + L2 LINE L2 2947 3068 -204 * 292 293 38 57 chr17 46127977 46128083 -43376470 + L2 LINE L2 3204 3307 -6 264 305 51 42 chr17 46128212 46128330 -43376223 - L2 LINE L2 -166 3106 2988 229 211 0 70 chr17 46128639 46128696 -43375857 - L2 LINE L2 0 3313 3261 2365 106 0 6 chr17 46128723 46129035 -43375518 - AluSx SINE Alu -2 310 1 398 242 159 15 chr17 46129167 46129299 -43375254 - MIR SINE MIR -10 252 102 282 109 0 22 chr17 46129320 46129366 -43375187 - MLT2B2 LTR ERVL 0 515 471 1745 156 35 35 chr17 46129366 46129706 -43374847 - MER2 DNA MER2_type 0 344 5 396 103 0 0 chr17 46129730 46129788 -43374765 + (CA)n Simple_repeat Simple_repeat 2 59 0 1523 75 0 15 chr17 46129799 46129998 -43374555 + AluSq SINE Alu 106 301 -12 2131 124 0 13 chr17 46130082 46130380 -43374173 - AluSg SINE Alu -16 294 1 1249 258 14 30 chr17 46130503 46130867 -43373686 - L1ME LINE L1 -397 5773 5416 309 286 29 81 chr17 46133068 46133283 -43371270 - MIR SINE MIR -40 222 20 257 200 0 20 chr17 46134020 46134070 -43370483 + MIR3 SINE MIR 139 187 -21 29 47 0 0 chr17 46135270 46135313 -43369240 + AT_rich Low_complexity Low_complexity 1 43 0 227 157 0 39 chr17 46135532 46135583 -43368970 - L1MC/D LINE L1 -1979 5829 5781 233 352 42 0 chr17 46135760 46135831 -43368722 + L3b LINE CR1 1504 1577 -6 4587 136 15 55 chr17 46135990 46136194 -43368359 + L1MC1 LINE L1 5494 5705 -628 2274 116 0 0 chr17 46136194 46136497 -43368056 + AluSx SINE Alu 1 303 -9 4587 136 15 55 chr17 46136497 46137167 -43367386 + L1MC1 LINE L1 5705 6333 0 1934 125 23 40 chr17 46137425 46137729 -43366824 + AluSx SINE Alu 1 299 -13 2112 173 90 2 chr17 46137762 46138185 -43366368 + MLT1C LTR MaLR 3 462 -5 1577 189 54 104 chr17 46138355 46138499 -43366054 + L1MD2 LINE L1 5795 5945 -414 2390 95 7 0 chr17 46138499 46138795 -43365758 - AluSx SINE Alu -14 298 1 1577 189 54 104 chr17 46138795 46139170 -43365383 + L1MD2 LINE L1 5945 6288 -71 1430 154 9 0 chr17 46139173 46139393 -43365160 - AluJb SINE Alu -4 308 87 315 200 0 31 chr17 46139394 46139459 -43365094 + L1MD2 LINE L1 6296 6358 -1 2081 110 17 7 chr17 46139468 46139768 -43364785 + AluSx SINE Alu 1 303 -9 350 289 62 24 chr17 46139775 46139965 -43364588 + L1ME4a LINE L1 5686 5888 -233 198 0 0 0 chr17 46140075 46140097 -43364456 + (GGAAA)n Simple_repeat Simple_repeat 4 25 0 25 0 0 0 chr17 46140846 46140871 -43363682 + GC_rich Low_complexity Low_complexity 1 25 0 319 265 51 20 chr17 46144243 46144341 -43360212 + MIR3 SINE MIR 92 192 -16 413 185 65 46 chr17 46144680 46144788 -43359765 - MIR SINE MIR -118 144 35 26 50 0 0 chr17 46145404 46145444 -43359109 + GC_rich Low_complexity Low_complexity 1 40 0 616 191 24 60 chr17 46145815 46145983 -43358570 + MIR3 SINE MIR 5 166 -42 213 39 0 0 chr17 46146041 46146067 -43358486 + (GA)n Simple_repeat Simple_repeat 1 26 0 2392 101 0 3 chr17 46148264 46148572 -43355981 - AluSx SINE Alu -5 307 1 245 265 0 0 chr17 46148591 46148640 -43355913 - MIR SINE MIR -131 131 83 181 317 33 0 chr17 46148921 46148981 -43355572 - L2 LINE L2 -7 3265 3204 348 64 0 0 chr17 46149313 46149360 -43355193 + (TC)n Simple_repeat Simple_repeat 2 48 0 210 37 0 0 chr17 46149360 46149387 -43355166 + (CA)n Simple_repeat Simple_repeat 1 27 0 519 231 16 0 chr17 46149863 46149984 -43354569 - MER94 DNA DNA -4 130 8 2045 134 0 0 chr17 46150010 46150301 -43354252 + AluSx SINE Alu 2 292 -20 220 233 14 27 chr17 46150755 46150828 -43353725 + GA-rich Low_complexity Low_complexity 6 77 0 778 285 127 31 chr17 46150833 46151187 -43353366 - L2 LINE L2 0 3313 2926 387 0 0 0 chr17 46151310 46151353 -43353200 + (TG)n Simple_repeat Simple_repeat 1 43 0 1307 136 10 5 chr17 46151466 46151672 -43352881 - AluJb SINE Alu -22 290 84 2283 83 0 16 chr17 46151677 46151991 -43352562 - AluY SINE Alu -2 309 1 192 97 0 0 chr17 46152511 46152542 -43352011 + (CA)n Simple_repeat Simple_repeat 1 31 0 1874 159 0 3 chr17 46153011 46153307 -43351246 - AluJo SINE Alu -17 295 1 527 333 58 83 chr17 46153319 46153613 -43350940 - L1ME3 LINE L1 -110 6054 5771 2334 98 0 3 chr17 46153613 46153918 -43350635 - AluSx SINE Alu -8 304 1 527 333 58 83 chr17 46153918 46154022 -43350531 - L1ME3 LINE L1 -393 5771 5666 523 344 122 18 chr17 46154022 46154571 -43349982 + L2 LINE L2 2661 3272 0 647 259 197 58 chr17 46155502 46155949 -43348604 + L2 LINE L2 2804 3312 -1 239 0 32 0 chr17 46157046 46157077 -43347476 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2123 104 0 0 chr17 46157092 46157370 -43347183 - AluSx SINE Alu -34 278 1 265 246 33 0 chr17 46157375 46157436 -43347117 + L2 LINE L2 3175 3237 -76 396 0 0 0 chr17 46157874 46157918 -43346635 + (TG)n Simple_repeat Simple_repeat 2 45 0 2201 97 3 10 chr17 46157970 46158278 -43346275 + AluSp SINE Alu 2 307 -6 1713 165 28 0 chr17 46158287 46158572 -43345981 + AluJb SINE Alu 1 293 -19 1092 117 9 47 chr17 46158573 46158786 -43345767 + MSTA LTR MaLR 189 393 -35 825 229 0 17 chr17 46158799 46158974 -43345579 - AluSg/x SINE Alu -3 307 136 283 95 0 0 chr17 46158974 46159016 -43345537 + MSTA LTR MaLR 386 427 -1 * 812 272 30 17 chr17 46159016 46159386 -43345167 - MLT2E LTR ERVL -179 449 3 271 376 158 17 chr17 46159396 46159750 -43344803 + L2 LINE L2 2818 3221 -51 427 283 0 18 chr17 46159818 46159931 -43344622 - MER5A DNA MER1_type -18 171 61 228 209 0 0 chr17 46159935 46159978 -43344575 - MER57A LTR ERV1 -60 343 301 231 217 54 54 chr17 46160885 46160977 -43343576 - L1ME4a LINE L1 -65 6056 5965 303 28 0 0 chr17 46160980 46161016 -43343537 + (TG)n Simple_repeat Simple_repeat 1 36 0 300 350 139 0 chr17 46161048 46161185 -43343368 - L1ME4a LINE L1 -214 5907 5752 919 151 0 0 chr17 46161511 46161650 -43342903 + AluJb SINE Alu 1 139 -173 22 35 0 0 chr17 46161674 46161703 -43342850 + AT_rich Low_complexity Low_complexity 1 29 0 574 127 42 17 chr17 46163200 46163318 -43341235 + L1MB7 LINE L1 5809 5929 -255 1276 158 11 110 chr17 46163572 46163629 -43340924 + MER58D DNA MER1_type 22 83 -2337 2178 98 7 0 chr17 46163629 46163926 -43340627 - AluSp SINE Alu -8 305 7 1276 158 11 110 chr17 46163926 46164040 -43340513 + MER58D DNA MER1_type 83 207 -2213 207 24 24 48 chr17 46164040 46164082 -43340471 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1276 158 11 110 chr17 46164082 46164137 -43340416 + MER58D DNA MER1_type 207 266 -2154 1496 156 94 4 chr17 46164137 46164413 -43340140 + AluJo SINE Alu 12 312 0 1276 158 11 110 chr17 46164413 46164565 -43339988 + MER58D DNA MER1_type 266 364 -22 276 229 72 0 chr17 46164582 46164665 -43339888 - MER5A DNA MER1_type 0 189 101 587 222 30 20 chr17 46164665 46164863 -43339690 + L1M4 LINE L1 5590 5789 -395 1443 120 0 24 chr17 46165022 46165094 -43339459 - AluSx SINE Alu -108 204 132 2301 99 0 6 chr17 46165094 46165406 -43339147 - AluSq SINE Alu -3 310 1 1443 120 0 24 chr17 46165406 46165542 -43339011 - AluSx SINE Alu -180 132 1 691 116 0 0 chr17 46165542 46165637 -43338916 - AluJ/FLAM SINE Alu -217 95 1 531 270 45 0 chr17 46165644 46165800 -43338753 - MER33 DNA MER1_type -272 52 1 224 191 0 44 chr17 46166406 46166474 -43338079 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1795 104 104 0 chr17 46166570 46166850 -43337703 + AluSx SINE Alu 3 311 -1 530 302 50 6 chr17 46167433 46167615 -43336938 - MIR3 SINE MIR -3 205 16 441 273 48 80 chr17 46168384 46168571 -43335982 + MER5A DNA MER1_type 9 189 0 639 314 6 0 chr17 46168938 46169107 -43335446 + MER91A DNA MER1_type 1 170 -26 1874 82 104 4 chr17 46169111 46169381 -43335172 - AluSp SINE Alu -16 297 1 294 106 82 118 chr17 46169417 46169476 -43335077 + MIR SINE MIR 39 96 -166 1245 223 17 27 chr17 46169476 46169768 -43334785 - AluJo SINE Alu -21 291 3 294 106 82 118 chr17 46169768 46169793 -43334760 + MIR SINE MIR 96 120 -142 2240 96 0 3 chr17 46169845 46170147 -43334406 + AluSg SINE Alu 1 301 -9 183 191 143 0 chr17 46170869 46170911 -43333642 - MIR SINE MIR -9 253 206 * 263 211 19 0 chr17 46170883 46170935 -43333618 - L2 LINE L2 -35 3278 3226 222 62 0 0 chr17 46171270 46171302 -43333251 + (A)n Simple_repeat Simple_repeat 1 32 0 518 297 185 5 chr17 46174461 46174656 -43329897 - MIR SINE MIR -31 231 2 1832 128 7 4 chr17 46179832 46180106 -43324447 - AluSx SINE Alu -37 275 1 2267 119 0 0 chr17 46181607 46181918 -43322635 - AluSx SINE Alu -1 311 1 625 220 25 0 chr17 46181944 46182062 -43322491 - FLAM_A SINE Alu -10 132 12 325 261 135 98 chr17 46182083 46182409 -43322144 - L2 LINE L2 -18 3254 2917 2304 102 0 3 chr17 46182746 46183059 -43321494 - AluSx SINE Alu 0 312 1 2106 92 0 4 chr17 46184169 46184513 -43320040 - AluSc SINE Alu 0 343 1 1093 74 0 0 chr17 46184513 46184648 -43319905 - AluSq/x SINE Alu -177 135 1 198 103 0 0 chr17 46184796 46184825 -43319728 + (A)n Simple_repeat Simple_repeat 1 29 0 1705 146 3 43 chr17 46185534 46185835 -43318718 + AluJo SINE Alu 2 290 -22 2048 107 35 0 chr17 46185840 46186129 -43318424 + AluSp SINE Alu 1 299 -14 2131 99 10 0 chr17 46186136 46186428 -43318125 + AluSx SINE Alu 1 295 -17 2216 76 24 0 chr17 46186430 46186719 -43317834 + AluSg SINE Alu 1 296 -14 235 257 135 0 chr17 46188406 46188480 -43316073 + MIR3 SINE MIR 85 168 -40 2295 101 7 0 chr17 46188595 46188903 -43315650 - AluSg SINE Alu 0 310 1 257 322 42 17 chr17 46190345 46190463 -43314090 + L3b LINE CR1 1368 1488 -95 321 251 200 29 chr17 46190798 46190973 -43313580 + MIR SINE MIR 44 248 -14 245 240 83 21 chr17 46192139 46192235 -43312318 - MIR SINE MIR -113 149 48 192 289 79 59 chr17 46193932 46194084 -43310469 + L2 LINE L2 3032 3186 -86 2125 112 7 3 chr17 46194271 46194576 -43309977 - AluSq SINE Alu -5 308 3 314 272 150 14 chr17 46194815 46194962 -43309591 + L2 LINE L2 2926 3092 -180 242 224 0 0 chr17 46195303 46195361 -43309192 + (TAA)n Simple_repeat Simple_repeat 1 58 0 354 256 52 37 chr17 46195427 46195618 -43308935 - MLT1J LTR MaLR -9 502 309 284 233 33 17 chr17 46196763 46196883 -43307670 + (CACCC)n Simple_repeat Simple_repeat 3 124 0 2181 79 7 0 chr17 46196999 46197278 -43307275 - AluSp SINE Alu -26 287 7 1272 146 13 82 chr17 46197285 46197392 -43307161 + MER58D DNA MER1_type 71 184 -2236 207 24 24 48 chr17 46197392 46197434 -43307119 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1272 146 13 82 chr17 46197434 46197489 -43307064 + MER58D DNA MER1_type 184 241 -2179 1573 156 94 4 chr17 46197489 46197765 -43306788 + AluJo SINE Alu 12 312 0 1272 146 13 82 chr17 46197765 46197917 -43306636 + MER58D DNA MER1_type 241 364 -22 369 209 47 0 chr17 46197934 46198020 -43306533 - MER5A DNA MER1_type 0 189 100 3000 154 21 11 chr17 46198020 46198219 -43306334 + L1MB7 LINE L1 5591 5786 -398 2378 162 61 9 chr17 46198219 46198681 -43305872 + MER66B LTR ERV1 1 486 0 3000 154 21 11 chr17 46198681 46199052 -43305501 + L1MB7 LINE L1 5786 6167 -17 192 263 32 42 chr17 46200132 46200227 -43304326 + L2 LINE L2 2690 2783 -531 1670 215 59 114 chr17 46200289 46200982 -43303571 - MER21B LTR ERV1 -169 694 40 254 291 68 43 chr17 46201206 46201323 -43303230 - MIR SINE MIR -62 146 27 432 262 24 55 chr17 46201482 46201532 -43303021 - MLT1L LTR MaLR -12 603 553 1264 164 4 35 chr17 46201532 46201763 -43302790 - MER58A DNA MER1_type 0 224 1 432 262 24 55 chr17 46201763 46201876 -43302677 - MLT1L LTR MaLR -62 553 445 263 198 161 12 chr17 46201914 46201995 -43302558 - MLT1L LTR MaLR -379 236 144 390 196 21 126 chr17 46201997 46202056 -43302497 - MER5B DNA MER1_type -7 171 134 2369 103 0 3 chr17 46202056 46202366 -43302187 + AluSc SINE Alu 1 309 0 390 196 21 126 chr17 46202366 46202449 -43302104 - MER5B DNA MER1_type -44 134 44 1990 128 16 48 chr17 46202561 46202935 -43301618 - THE1B LTR MaLR -2 362 1 273 313 84 38 chr17 46202973 46203104 -43301449 + MIR SINE MIR 126 262 0 1705 174 109 70 chr17 46203516 46204000 -43300553 - MLT1D LTR MaLR -2 503 1 220 235 106 0 chr17 46204145 46204230 -43300323 + MIR SINE MIR 167 260 -2 2408 99 0 0 chr17 46204384 46204688 -43299865 + AluSx SINE Alu 1 304 -8 197 300 10 60 chr17 46204698 46204798 -43299755 - MER5A DNA MER1_type 0 189 95 1220 97 5 43 chr17 46205895 46206081 -43298472 - AluSg/x SINE Alu -12 297 119 183 244 0 134 chr17 46206194 46206226 -43298327 + MIR SINE MIR 77 112 -150 2164 101 27 10 chr17 46206226 46206522 -43298031 - AluSx SINE Alu -11 301 1 2116 130 36 0 chr17 46206523 46206824 -43297729 - AluSx SINE Alu 0 312 1 183 244 0 134 chr17 46206824 46206871 -43297682 + MIR SINE MIR 111 147 -115 552 213 41 8 chr17 46206872 46206994 -43297559 + MLT1J LTR MaLR 20 145 -366 2190 178 5 18 chr17 46206994 46207393 -43297160 + MER66B LTR ERV1 1 394 -92 1141 67 0 8 chr17 46207393 46207527 -43297026 + AluSq/x SINE Alu 1 133 -180 2157 130 0 13 chr17 46207530 46207664 -43296889 + AluSx SINE Alu 1 135 -177 2438 78 0 23 chr17 46207664 46207970 -43296583 + AluY SINE Alu 1 299 -12 2157 130 0 13 chr17 46207970 46208135 -43296418 + AluSx SINE Alu 135 296 -16 671 160 0 0 chr17 46208140 46208246 -43296307 + MER66B LTR ERV1 379 484 -2 332 184 172 0 chr17 46208264 46208351 -43296202 - LTR52 LTR ERVL -215 206 105 293 301 90 32 chr17 46208855 46208938 -43295615 - MIR SINE MIR -6 256 179 2012 104 10 42 chr17 46208938 46209247 -43295306 - AluSx SINE Alu -12 300 2 293 301 90 32 chr17 46209247 46209319 -43295234 - MIR SINE MIR -83 179 92 2316 99 10 0 chr17 46209473 46209775 -43294778 + AluSq SINE Alu 1 305 -8 360 252 52 17 chr17 46209781 46209896 -43294657 + MER5B DNA MER1_type 59 177 -1 480 248 78 0 chr17 46210354 46210483 -43294070 + MIR SINE MIR 80 218 -44 315 256 181 15 chr17 46210515 46210648 -43293905 + L2 LINE L2 3118 3272 0 2855 203 30 5 chr17 46210940 46211502 -43293051 - MLT1G LTR MaLR -5 585 10 243 177 19 43 chr17 46211632 46211714 -43292839 + MIR SINE MIR 71 136 -72 1958 138 50 19 chr17 46211734 46212095 -43292458 + THE1C LTR MaLR 1 372 -3 457 200 0 0 chr17 46213224 46213309 -43291244 - L2 LINE L2 -6 3307 3223 1738 156 0 55 chr17 46213418 46213725 -43290828 - AluJb SINE Alu -22 290 1 371 269 22 30 chr17 46214516 46214650 -43289903 + Charlie8 DNA MER1_type 79 211 -2206 419 225 11 0 chr17 46214668 46214757 -43289796 + MER91A DNA MER1_type 1 90 -106 206 200 22 0 chr17 46215139 46215184 -43289369 + L2 LINE L2 3265 3310 -3 203 167 0 0 chr17 46215732 46215774 -43288779 + T-rich Low_complexity Low_complexity 1 42 0 2167 57 4 4 chr17 46215824 46216088 -43288465 + AluSg SINE Alu 47 310 0 2160 57 86 11 chr17 46217925 46218204 -43286349 + AluY SINE Alu 1 300 -11 2150 91 9 67 chr17 46219221 46219550 -43285003 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 46219594 46219615 -43284938 + AT_rich Low_complexity Low_complexity 1 21 0 199 355 0 0 chr17 46219917 46219979 -43284574 - L2 LINE L2 -4 3268 3207 385 284 109 16 chr17 46220158 46220341 -43284212 + L2 LINE L2 3019 3218 -95 2046 96 62 24 chr17 46220342 46220634 -43283919 - AluY SINE Alu -8 303 1 576 234 31 75 chr17 46220652 46220879 -43283674 - L1ME1 LINE L1 -5 6161 5945 374 272 39 10 chr17 46220887 46220990 -43283563 + L2 LINE L2 3208 3313 0 2433 88 3 0 chr17 46221029 46221325 -43283228 + AluSp SINE Alu 1 297 -16 213 271 51 0 chr17 46221328 46221387 -43283166 - L2 LINE L2 -97 3175 3114 426 389 18 4 chr17 46221453 46221679 -43282874 + MIR SINE MIR 31 259 -3 2346 113 3 0 chr17 46221707 46222017 -43282536 + AluSq SINE Alu 1 311 -2 665 298 148 25 chr17 46222107 46222466 -43282087 - MLT1I LTR MaLR -6 403 1 290 305 53 20 chr17 46222577 46222728 -43281825 - L2 LINE L2 -213 3059 2904 25 0 0 0 chr17 46223143 46223168 -43281385 + GC_rich Low_complexity Low_complexity 1 25 0 1076 272 21 32 chr17 46223800 46224175 -43280378 - L1ME1 LINE L1 -205 5916 5546 243 0 0 0 chr17 46224882 46224909 -43279644 + (T)n Simple_repeat Simple_repeat 1 27 0 2285 113 3 3 chr17 46225127 46225437 -43279116 - AluSg SINE Alu 0 310 1 1400 178 128 46 chr17 46226169 46226535 -43278018 + MSTD LTR MaLR 1 396 0 260 266 53 9 chr17 46226924 46227037 -43277516 - LTR67 LTR ERVL -12 545 428 241 242 61 0 chr17 46227175 46227241 -43277312 - MLT1K LTR MaLR -392 196 127 2307 87 0 14 chr17 46227323 46227636 -43276917 + AluSq SINE Alu 1 309 0 200 276 0 69 chr17 46227681 46227739 -43276814 - MIR SINE MIR -3 259 206 190 299 13 13 chr17 46227807 46227884 -43276669 - MIR SINE MIR -9 253 177 327 308 23 8 chr17 46228004 46228137 -43276416 - L2 LINE L2 -285 2987 2853 636 259 124 5 chr17 46228190 46228383 -43276170 - MIR SINE MIR 0 262 47 1890 132 3 79 chr17 46228462 46228630 -43275923 - AluJo SINE Alu -18 294 160 2351 86 24 0 chr17 46228630 46228922 -43275631 - AluSx SINE Alu -13 299 1 1890 132 3 79 chr17 46228922 46229071 -43275482 - AluJo SINE Alu -152 160 1 634 293 101 5 chr17 46229446 46229644 -43274909 + MIR SINE MIR 32 248 -14 449 273 65 26 chr17 46229691 46229845 -43274708 - MIR SINE MIR -78 184 25 401 226 53 30 chr17 46230637 46230770 -43273783 + MIR SINE MIR 81 216 -46 506 267 56 19 chr17 46230803 46230964 -43273589 - L2 LINE L2 0 3313 3147 2037 153 0 0 chr17 46231077 46231371 -43273182 + AluJo SINE Alu 1 294 -18 352 355 42 9 chr17 46231593 46231807 -43272746 + MIR SINE MIR 20 240 -22 343 173 66 11 chr17 46231817 46231915 -43272638 - MIR SINE MIR -80 128 18 385 239 36 65 chr17 46233696 46233834 -43270719 - MIR SINE MIR -118 144 11 800 294 38 11 chr17 46234133 46234395 -43270158 - MLT1K LTR MaLR -232 356 88 1615 149 42 0 chr17 46234622 46234883 -43269670 + AluJo SINE Alu 1 272 -40 2530 53 0 7 chr17 46234883 46235187 -43269366 + AluY SINE Alu 1 302 -9 26 0 0 0 chr17 46235201 46235227 -43269326 + AT_rich Low_complexity Low_complexity 1 26 0 651 219 52 19 chr17 46235286 46235441 -43269112 + MIR SINE MIR 57 216 -46 332 236 203 30 chr17 46235960 46236023 -43268530 - L1MC4 LINE L1 -3 8039 7988 1720 177 0 27 chr17 46236023 46236323 -43268230 - AluJo SINE Alu -20 292 1 332 236 203 30 chr17 46236323 46236469 -43268084 - L1MC4 LINE L1 -54 7988 7869 2320 91 10 0 chr17 46236469 46236766 -43267787 + AluSc SINE Alu 1 300 -9 332 236 203 30 chr17 46236766 46236856 -43267697 - L1MC4 LINE L1 -173 7869 7687 346 291 146 0 chr17 46237321 46237431 -43267122 - L2 LINE L2 -4 3309 3184 260 218 82 64 chr17 46237716 46237826 -43266727 + MLT1H LTR MaLR 439 533 -16 550 254 146 35 chr17 46237853 46238195 -43266358 - L2 LINE L2 -124 3189 2810 249 302 69 45 chr17 46239629 46239837 -43264716 + MIR SINE MIR 23 237 -25 181 217 133 17 chr17 46240008 46240068 -43264485 - MIR3 SINE MIR -27 181 115 184 315 27 0 chr17 46240947 46241020 -43263533 - MIR SINE MIR -101 107 33 319 280 46 45 chr17 46241398 46241426 -43263127 + MIR SINE MIR 20 46 -175 1979 84 91 0 chr17 46241426 46241689 -43262864 + AluSq SINE Alu 6 292 -21 319 280 46 45 chr17 46241689 46241796 -43262757 + MIR SINE MIR 46 154 -67 1928 110 0 0 chr17 46241804 46242100 -43262453 + AluSg SINE Alu 37 332 0 487 269 47 7 chr17 46242104 46242253 -43262300 - MIR SINE MIR -24 238 84 286 295 101 13 chr17 46242658 46242807 -43261746 + MER5B DNA MER1_type 15 176 -2 1683 163 87 7 chr17 46243007 46243126 -43261427 + AluJo SINE Alu 1 109 -203 210 37 0 0 chr17 46243126 46243153 -43261400 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 1683 163 87 7 chr17 46243153 46243322 -43261231 + AluJo SINE Alu 109 312 0 913 129 39 7 chr17 46243462 46243617 -43260936 + MER20 DNA MER1_type 47 206 -13 615 248 133 9 chr17 46243935 46244153 -43260400 + MIR SINE MIR 14 258 -4 2300 90 10 3 chr17 46244156 46244445 -43260108 + AluSg SINE Alu 1 291 -19 238 340 0 66 chr17 46244591 46244662 -43259891 + MER5A DNA MER1_type 85 148 -41 2188 81 0 32 chr17 46244662 46244946 -43259607 - AluSq SINE Alu -18 295 21 238 340 0 66 chr17 46244946 46244980 -43259573 + MER5A DNA MER1_type 148 183 -6 518 202 119 0 chr17 46244987 46245096 -43259457 + MIR SINE MIR 18 139 -123 212 229 48 48 chr17 46246716 46246799 -43257754 - MIR SINE MIR -74 188 106 429 243 149 14 chr17 46246818 46246966 -43257587 + MER5B DNA MER1_type 5 172 -6 270 214 48 0 chr17 46247001 46247089 -43257464 + MIR SINE MIR 60 151 -62 455 231 4 145 chr17 46247187 46247421 -43257132 + L2 LINE L2 3113 3313 0 351 255 9 9 chr17 46248151 46248257 -43256296 - MIR SINE MIR -57 151 46 1659 142 13 55 chr17 46248259 46248569 -43255984 + AluJo SINE Alu 1 297 -15 1792 184 132 32 chr17 46248588 46249028 -43255525 + MLT1D LTR MaLR 22 505 0 2031 143 0 0 chr17 46249744 46250038 -43254515 + AluSx SINE Alu 1 294 -18 1991 148 0 0 chr17 46250057 46250354 -43254199 + AluJb SINE Alu 10 306 -6 2406 71 0 0 chr17 46250354 46250650 -43253903 + AluY SINE Alu 1 296 -15 2107 104 3 17 chr17 46250650 46250949 -43253604 + AluSp SINE Alu 1 295 -18 1748 166 17 0 chr17 46250964 46251253 -43253300 + AluJo SINE Alu 5 298 -14 2245 101 3 3 chr17 46251383 46251690 -43252863 + AluSq SINE Alu 1 307 -6 269 310 121 23 chr17 46251702 46251876 -43252677 + MIR SINE MIR 20 210 -52 1181 257 24 30 chr17 46251968 46252306 -43252247 + LTR16C LTR ERVL 156 491 0 1674 121 73 11 chr17 46252330 46252603 -43251950 - AluJb SINE Alu -22 290 1 201 297 7 95 chr17 46253772 46253920 -43250633 + MIR SINE MIR 43 177 -85 309 289 35 70 chr17 46254288 46254430 -43250123 + L1MC5 LINE L1 7788 7924 -37 699 174 70 47 chr17 46254567 46254641 -43249912 - MER45A DNA AcHobo -1405 176 105 2041 142 0 13 chr17 46254641 46254950 -43249603 + AluSq SINE Alu 1 305 -8 699 174 70 47 chr17 46254950 46255047 -43249506 - MER45A DNA AcHobo -1476 105 1 2260 100 3 10 chr17 46255189 46255500 -43249053 - AluSg SINE Alu -1 309 1 1034 235 23 34 chr17 46255509 46255773 -43248780 - MIR SINE MIR 0 262 2 195 248 152 19 chr17 46256525 46256630 -43247923 - L2 LINE L2 -209 3063 2945 393 321 30 8 chr17 46256678 46256812 -43247741 - MIR SINE MIR -64 198 62 268 274 0 0 chr17 46257422 46257484 -43247069 + CT-rich Low_complexity Low_complexity 3 64 0 1995 106 23 16 chr17 46257800 46258103 -43246450 + AluSx SINE Alu 1 305 -7 332 296 194 16 chr17 46258792 46258978 -43245575 - MIR SINE MIR 0 262 44 229 147 150 48 chr17 46259367 46259452 -43245101 + MIR SINE MIR 46 151 -57 24 0 0 0 chr17 46260632 46260656 -43243897 + AT_rich Low_complexity Low_complexity 1 24 0 333 0 0 0 chr17 46261408 46261445 -43243108 + (CA)n Simple_repeat Simple_repeat 1 37 0 355 250 0 0 chr17 46262158 46262234 -43242319 - MIR SINE MIR -140 122 47 1684 160 17 0 chr17 46262335 46262629 -43241924 + AluJb SINE Alu 1 299 -13 2210 107 0 0 chr17 46263451 46263759 -43240794 + AluSc SINE Alu 1 308 -1 2195 110 0 0 chr17 46263798 46264099 -43240454 + AluSq SINE Alu 1 301 -12 279 0 0 0 chr17 46264372 46264403 -43240150 + (TG)n Simple_repeat Simple_repeat 1 31 0 493 285 66 0 chr17 46265128 46265279 -43239274 + MIR3 SINE MIR 31 191 -17 234 255 51 51 chr17 46265281 46265379 -43239174 - MIR SINE MIR -72 190 93 276 299 35 35 chr17 46265880 46266024 -43238529 + MIR SINE MIR 60 203 -59 360 214 8 94 chr17 46266150 46266267 -43238286 + MIR3 SINE MIR 54 160 -48 520 252 14 49 chr17 46266267 46266499 -43238054 + Charlie8 DNA MER1_type 1 236 -2181 453 185 83 0 chr17 46267391 46267499 -43237054 + MER53 DNA DNA 1 117 -72 1933 126 49 0 chr17 46267720 46268006 -43236547 + AluSx SINE Alu 1 300 -12 698 169 8 8 chr17 46268014 46268132 -43236421 + AluJo/FLAM SINE Alu 1 118 -184 2220 95 0 0 chr17 46268132 46268428 -43236125 - AluSg SINE Alu -14 296 1 2318 68 0 13 chr17 46268438 46268745 -43235808 - AluY SINE Alu -8 303 1 244 261 43 0 chr17 46268792 46268861 -43235692 + MLT1J LTR MaLR 210 281 -230 259 250 69 17 chr17 46268903 46269019 -43235534 + MLT1J LTR MaLR 377 498 -13 297 167 0 0 chr17 46269215 46269269 -43235284 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 207 0 0 0 chr17 46269269 46269292 -43235261 + (CA)n Simple_repeat Simple_repeat 2 24 0 2186 116 3 3 chr17 46269459 46269770 -43234783 + AluSx SINE Alu 1 311 -1 1107 107 0 0 chr17 46269774 46269923 -43234630 + AluSp SINE Alu 129 277 -36 204 67 0 0 chr17 46269927 46269957 -43234596 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 551 294 29 55 chr17 46270307 46270475 -43234078 - MIR SINE MIR -29 233 71 2136 120 0 0 chr17 46270475 46270776 -43233777 + AluSx SINE Alu 1 301 -11 551 294 29 55 chr17 46270776 46270845 -43233708 - MIR SINE MIR -191 71 2 457 296 96 5 chr17 46270966 46271172 -43233381 - MIR SINE MIR -35 227 3 2059 125 0 22 chr17 46272174 46272356 -43232197 - AluSx SINE Alu 0 312 138 2325 72 0 25 chr17 46272356 46272674 -43231879 - AluY SINE Alu -1 310 1 2059 125 0 22 chr17 46272674 46272810 -43231743 - AluSx SINE Alu -174 138 1 453 279 0 8 chr17 46272843 46272965 -43231588 + MIR SINE MIR 32 152 -110 417 265 32 92 chr17 46273045 46273127 -43231426 - MIR3 SINE MIR -15 193 108 2514 52 0 3 chr17 46273127 46273432 -43231121 + AluY SINE Alu 1 304 -7 417 265 32 92 chr17 46273432 46273534 -43231019 - MIR3 SINE MIR -100 108 20 453 293 25 19 chr17 46273563 46273720 -43230833 + MIR SINE MIR 37 194 -68 186 43 0 0 chr17 46274953 46274976 -43229577 + (TG)n Simple_repeat Simple_repeat 1 23 0 286 203 19 99 chr17 46276099 46276251 -43228302 + MIR3 SINE MIR 71 206 -2 619 198 27 0 chr17 46277483 46277594 -43226959 - MER81 DNA DNA 0 114 1 473 170 7 92 chr17 46278531 46278615 -43225938 + MER96B DNA MER1_type? 241 310 -107 1939 124 31 0 chr17 46278615 46278905 -43225648 - AluSg SINE Alu -11 299 1 473 170 7 92 chr17 46278905 46278961 -43225592 + MER96B DNA MER1_type? 310 369 -48 588 278 43 24 chr17 46279042 46279251 -43225302 + MIR SINE MIR 37 249 -13 219 178 44 0 chr17 46279220 46279265 -43225288 + L2 LINE L2 3264 3310 -3 * 2000 107 6 52 chr17 46279654 46280161 -43224392 + AluSx SINE Alu 1 312 0 2577 154 51 63 chr17 46281128 46281464 -43223089 - L1MB2 LINE L1 -1 6170 5832 818 163 0 15 chr17 46281464 46281599 -43222954 - FLAM_C SINE Alu 0 133 1 2577 154 51 63 chr17 46281599 46281646 -43222907 - L1MB2 LINE L1 -339 5832 5786 2456 72 0 0 chr17 46281646 46281950 -43222603 - AluSc SINE Alu -5 304 1 2577 154 51 63 chr17 46281950 46282066 -43222487 - L1MB2 LINE L1 -385 5786 5676 2419 79 0 0 chr17 46282066 46282370 -43222183 - AluY SINE Alu -7 304 1 2577 154 51 63 chr17 46282370 46282459 -43222094 - L1MB2 LINE L1 -495 5676 5587 811 158 0 8 chr17 46282481 46282601 -43221952 - FLAM_C SINE Alu -23 120 2 2064 108 10 3 chr17 46282605 46282901 -43221652 - AluSx SINE Alu -1 311 14 1048 146 6 11 chr17 46282901 46283079 -43221474 - MLT1B LTR MaLR -210 180 4 2216 95 3 3 chr17 46283333 46283629 -43220924 + AluSc SINE Alu 1 296 -13 2171 111 0 0 chr17 46283701 46283999 -43220554 + AluSx SINE Alu 1 298 -14 2343 82 0 3 chr17 46284009 46284315 -43220238 + AluY SINE Alu 1 305 -6 450 276 83 22 chr17 46284487 46284668 -43219885 + MIR SINE MIR 37 228 -34 2300 68 0 3 chr17 46285812 46286104 -43218449 - AluY SINE Alu -20 291 1 273 286 38 29 chr17 46286652 46286757 -43217796 + MIR SINE MIR 87 192 -70 559 250 86 0 chr17 46286792 46286944 -43217609 + MIR3 SINE MIR 42 206 -2 2157 107 0 28 chr17 46287534 46287853 -43216700 + AluSp SINE Alu 1 310 -3 187 250 0 0 chr17 46287995 46288035 -43216518 - L2 LINE L2 -23 3249 3210 * 330 320 39 39 chr17 46288009 46288162 -43216391 - MIR SINE MIR -31 231 79 281 261 0 0 chr17 46288527 46288596 -43215957 - MIR3 SINE MIR -48 160 92 2361 65 7 3 chr17 46288647 46288953 -43215600 - AluY SINE Alu 0 311 5 267 312 65 22 chr17 46289648 46289786 -43214767 + MIR SINE MIR 21 164 -98 2310 62 0 36 chr17 46290142 46290450 -43214103 - AluSp SINE Alu -16 297 1 554 242 87 0 chr17 46290478 46290627 -43213926 - MIR SINE MIR -59 203 42 25 0 0 0 chr17 46291020 46291045 -43213508 + GC_rich Low_complexity Low_complexity 1 25 0 193 269 58 0 chr17 46291609 46291661 -43212892 + MIR SINE MIR 92 146 -62 2467 58 0 3 chr17 46291667 46291977 -43212576 + AluY SINE Alu 1 309 -2 2073 71 32 7 chr17 46292218 46292501 -43212052 - AluSg SINE Alu -20 290 1 537 310 71 0 chr17 46292534 46292718 -43211835 + MIR SINE MIR 38 234 -28 320 211 29 58 chr17 46292823 46292927 -43211626 - MER5A DNA MER1_type -80 109 9 916 183 24 0 chr17 46292949 46293113 -43211440 - MER5A DNA MER1_type -13 176 9 203 345 0 24 chr17 46293672 46293756 -43210797 + C-rich Low_complexity Low_complexity 2 83 0 662 225 21 99 chr17 46293765 46293816 -43210737 - MER5B DNA MER1_type 0 178 125 2253 60 20 13 chr17 46293816 46294117 -43210436 - AluSx SINE Alu -9 303 1 662 225 21 99 chr17 46294117 46294256 -43210297 - MER5B DNA MER1_type -53 125 3 427 280 74 34 chr17 46294266 46294441 -43210112 - MER5A DNA MER1_type -6 183 2 204 274 302 16 chr17 46294570 46294753 -43209800 + MIR SINE MIR 21 251 -11 2162 102 51 0 chr17 46297182 46297477 -43207076 - AluSp SINE Alu -3 310 1 228 289 60 64 chr17 46297731 46297966 -43206587 + L2 LINE L2 1961 2194 -1120 2139 78 82 0 chr17 46297971 46298252 -43206301 - AluSx SINE Alu -8 304 1 959 178 5 20 chr17 46298257 46298454 -43206099 - L1MB3 LINE L1 0 6183 5990 589 298 39 0 chr17 46298458 46298636 -43205917 - MIR SINE MIR -7 255 71 706 266 105 31 chr17 46298731 46299017 -43205536 + MLT1I LTR MaLR 60 366 -43 232 349 103 35 chr17 46299116 46299773 -43204780 + L2 LINE L2 2273 2974 -340 192 40 0 0 chr17 46299855 46299880 -43204673 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1676 143 4 23 chr17 46299896 46300161 -43204392 - AluJo SINE Alu -52 260 1 2280 103 7 0 chr17 46301184 46301474 -43203079 + AluSx SINE Alu 1 292 -20 362 333 69 5 chr17 46301531 46301720 -43202833 + L2 LINE L2 3095 3295 -18 423 83 0 0 chr17 46301724 46301784 -43202769 + (TGGA)n Simple_repeat Simple_repeat 1 60 0 1870 114 88 4 chr17 46302798 46303070 -43201483 + AluSg SINE Alu 1 295 -15 556 105 0 19 chr17 46303142 46303247 -43201306 + (CA)n Simple_repeat Simple_repeat 1 103 0 333 210 90 30 chr17 46303254 46303354 -43201199 + MIR SINE MIR 28 133 -129 348 43 0 0 chr17 46303633 46303679 -43200874 + (TC)n Simple_repeat Simple_repeat 1 46 0 228 35 0 0 chr17 46303678 46303707 -43200846 + (CA)n Simple_repeat Simple_repeat 1 29 0 * 296 323 87 36 chr17 46303770 46303965 -43200588 + MIR SINE MIR 23 227 -35 357 315 16 0 chr17 46305103 46305230 -43199323 + (TG)n Simple_repeat Simple_repeat 1 129 0 243 274 14 27 chr17 46305739 46305812 -43198741 + MIR SINE MIR 117 188 -74 2417 90 6 13 chr17 46305821 46306133 -43198420 + AluSx SINE Alu 1 310 -2 1983 150 3 0 chr17 46306294 46306588 -43197965 - AluJo SINE Alu -16 296 2 287 197 8 120 chr17 46306640 46306757 -43197796 - MIR SINE MIR -83 179 76 404 353 68 5 chr17 46307140 46307361 -43197192 + MIR SINE MIR 5 239 -23 853 113 0 0 chr17 46307510 46307625 -43196928 + AluY SINE Alu 179 293 -18 2228 80 35 3 chr17 46307738 46308025 -43196528 - AluY SINE Alu -15 296 1 2438 96 0 0 chr17 46308025 46308327 -43196226 - AluSx SINE Alu -10 302 1 301 226 70 61 chr17 46308331 46308446 -43196107 - MIR3 SINE MIR 0 208 93 281 277 50 40 chr17 46309561 46309594 -43194959 + MIR SINE MIR 91 122 -140 2280 123 0 19 chr17 46309594 46309911 -43194642 - AluSx SINE Alu -1 311 1 281 277 50 40 chr17 46309911 46309978 -43194575 + MIR SINE MIR 122 192 -70 2391 113 0 3 chr17 46310067 46310378 -43194175 + AluSg SINE Alu 1 310 0 1871 158 0 23 chr17 46310666 46310969 -43193584 + AluJo SINE Alu 1 296 -16 2999 175 20 8 chr17 46310969 46311560 -43192993 - L1MB7 LINE L1 -152 6032 5432 2379 104 0 0 chr17 46311560 46311878 -43192675 - AluSq SINE Alu 0 318 1 1108 189 32 58 chr17 46311879 46312018 -43192535 - L1MB7 LINE L1 -1422 4724 4583 2058 211 62 30 chr17 46312018 46312516 -43192037 - MLT2B2 LTR ERVL 0 515 2 1108 189 32 58 chr17 46312516 46312689 -43191864 - L1MB7 LINE L1 -1563 4583 4420 282 231 62 0 chr17 46312696 46312761 -43191792 - L1MB7 LINE L1 -1798 4348 4280 2288 104 7 23 chr17 46312773 46313082 -43191471 - AluSq SINE Alu -9 304 1 306 339 37 0 chr17 46313137 46313246 -43191307 + L1MC4 LINE L1 7778 7890 -152 2213 208 48 43 chr17 46313247 46313617 -43190936 + L1MD2 LINE L1 5573 5948 -411 1584 154 26 82 chr17 46313617 46313923 -43190630 + AluJb SINE Alu 1 289 -23 2213 208 48 43 chr17 46313923 46314109 -43190444 + L1MD2 LINE L1 5948 6132 -227 2278 131 0 0 chr17 46314144 46314456 -43190097 - AluSx SINE Alu 0 312 1 260 282 103 0 chr17 46314472 46314589 -43189964 + L1MC4 LINE L1 7914 8042 0 194 208 21 21 chr17 46315123 46315171 -43189382 + MER5B DNA MER1_type 79 126 -52 1629 101 4 40 chr17 46315316 46315396 -43189157 + AluSq SINE Alu 59 140 -173 2065 100 0 70 chr17 46315396 46315697 -43188856 + AluSg SINE Alu 12 291 -19 1629 101 4 40 chr17 46315697 46315886 -43188667 + AluSq SINE Alu 140 313 0 2202 78 68 0 chr17 46315886 46316167 -43188386 + AluSp SINE Alu 1 300 -13 930 163 67 1 chr17 46316470 46316785 -43187768 + MER58D DNA MER1_type 7 383 -3 2141 122 3 31 chr17 46316810 46317129 -43187424 + AluJb SINE Alu 1 310 -2 417 70 0 0 chr17 46317672 46317729 -43186824 + (TG)n Simple_repeat Simple_repeat 1 57 0 1959 152 0 23 chr17 46317830 46318133 -43186420 + AluJb SINE Alu 1 296 -16 212 302 14 115 chr17 46319116 46319201 -43185352 + MIR3 SINE MIR 15 82 -126 2357 67 42 0 chr17 46319201 46319484 -43185069 - AluY SINE Alu -16 295 1 212 302 14 115 chr17 46319484 46319537 -43185016 + MIR3 SINE MIR 82 139 -69 2005 232 99 31 chr17 46319611 46319963 -43184590 - MER115 DNA AcHobo 0 693 366 270 0 0 0 chr17 46319963 46319993 -43184560 + (CA)n Simple_repeat Simple_repeat 2 31 0 2005 232 99 31 chr17 46319993 46320286 -43184267 - MER115 DNA AcHobo -327 366 4 383 324 63 0 chr17 46320941 46321145 -43183408 + MIR SINE MIR 42 258 -4 481 305 40 6 chr17 46321316 46321493 -43183060 - MIR SINE MIR 0 262 80 271 231 21 105 chr17 46321908 46322051 -43182502 - MIR SINE MIR -62 146 16 312 254 73 18 chr17 46323360 46323470 -43181083 + MIR SINE MIR 20 135 -127 202 118 0 29 chr17 46323535 46323547 -43181006 + (TTCC)n Simple_repeat Simple_repeat 4 15 -21 2376 71 0 3 chr17 46323547 46323843 -43180710 + AluY SINE Alu 1 295 -16 202 118 0 29 chr17 46323843 46323864 -43180689 + (TTCC)n Simple_repeat Simple_repeat 15 36 0 857 181 0 60 chr17 46323903 46324085 -43180468 + AluJb SINE Alu 137 307 -5 1078 307 48 21 chr17 46325084 46325521 -43179032 - MLT1J LTR MaLR -62 449 1 409 289 31 8 chr17 46325699 46325827 -43178726 + MLT1H LTR MaLR 95 225 -324 932 142 8 0 chr17 46326162 46326296 -43178257 + AluSq/x SINE Alu 1 135 -177 2097 123 7 3 chr17 46326297 46326581 -43177972 + AluSx SINE Alu 1 285 -27 222 164 0 0 chr17 46326584 46326639 -43177914 + (CAATA)n Simple_repeat Simple_repeat 3 57 0 299 347 174 0 chr17 46326647 46326791 -43177762 - L2 LINE L2 0 3272 3104 653 114 0 41 chr17 46327414 46327537 -43177016 + MER41A LTR ERV1 437 554 0 204 256 151 23 chr17 46327636 46327722 -43176831 - L2 LINE L2 0 3272 3176 2308 89 7 0 chr17 46327768 46328059 -43176494 + AluSx SINE Alu 18 310 -2 804 191 26 0 chr17 46328129 46328281 -43176272 + MER5A DNA MER1_type 31 186 -3 2417 68 0 7 chr17 46328314 46328607 -43175946 - AluY SINE Alu -20 291 1 2326 98 0 3 chr17 46328618 46328913 -43175640 - AluSq SINE Alu -18 295 2 2184 137 0 9 chr17 46328919 46329234 -43175319 - AluSx SINE Alu 0 312 1 202 333 100 38 chr17 46329235 46329475 -43175078 - L2 LINE L2 -189 3083 2829 1541 217 78 47 chr17 46330689 46330972 -43173581 + MER39 LTR ERV1 1 274 -433 2365 92 0 7 chr17 46330972 46331278 -43173275 - AluSx SINE Alu -8 304 1 1541 217 78 47 chr17 46331278 46331481 -43173072 + MER39 LTR ERV1 274 687 -20 471 285 35 52 chr17 46331568 46331740 -43172813 - L2 LINE L2 0 3272 3104 1229 133 0 0 chr17 46331982 46332155 -43172398 - AluSx SINE Alu -15 297 125 275 105 0 67 chr17 46332155 46332260 -43172293 + (TA)n Simple_repeat Simple_repeat 2 99 0 2476 72 0 0 chr17 46332262 46332555 -43171998 - AluY SINE Alu -15 296 4 1076 103 0 0 chr17 46332559 46332695 -43171858 - AluSx SINE Alu -177 136 1 1554 191 148 34 chr17 46332696 46333109 -43171444 - MER31B LTR ERV1 -6 460 1 1665 166 4 4 chr17 46333358 46333611 -43170942 + AluJb SINE Alu 21 273 -39 321 222 28 0 chr17 46333884 46333956 -43170597 + MER96B DNA MER1_type? 19 92 -325 2053 131 8 57 chr17 46333957 46334340 -43170213 + THE1B LTR MaLR 1 364 0 2288 110 0 10 chr17 46334347 46334647 -43169906 - AluSx SINE Alu -15 297 1 359 109 109 0 chr17 46334758 46334822 -43169731 - FLAM_A SINE Alu -28 105 35 423 117 67 117 chr17 46334838 46334913 -43169640 - LTR52 LTR ERVL -307 114 46 2373 102 0 7 chr17 46334913 46335218 -43169335 + AluSg SINE Alu 2 304 -6 423 117 67 117 chr17 46335218 46335262 -43169291 - LTR52 LTR ERVL -375 46 1 * 424 234 108 44 chr17 46335262 46335409 -43169144 + MLT1J LTR MaLR 242 398 -113 1503 272 105 44 chr17 46335657 46335950 -43168603 - L3 LINE CR1 -49 1528 1254 1023 223 209 39 chr17 46335950 46336413 -43168140 + MLT1F LTR MaLR 1 542 0 1503 272 105 44 chr17 46336413 46336462 -43168091 - L3 LINE CR1 -323 1254 1209 3662 101 37 5 chr17 46336462 46337024 -43167529 - LTR19B LTR ERV1 0 580 1 1503 272 105 44 chr17 46337024 46337312 -43167241 - L3 LINE CR1 -368 1209 940 2331 115 0 0 chr17 46337312 46337616 -43166937 - AluSx SINE Alu -7 305 2 1503 272 105 44 chr17 46337616 46337829 -43166724 - L3 LINE CR1 -637 940 631 275 319 145 0 chr17 46337866 46338004 -43166549 - MIR SINE MIR -8 254 97 2288 119 3 0 chr17 46338045 46338347 -43166206 + AluSx SINE Alu 1 303 -9 311 113 19 0 chr17 46338347 46338400 -43166153 + GA-rich Low_complexity Low_complexity 2 55 0 1538 110 5 0 chr17 46338553 46338753 -43165800 + AluSp SINE Alu 97 297 -16 1816 96 144 4 chr17 46338756 46339027 -43165526 + AluSg1 SINE Alu 1 309 0 396 317 92 0 chr17 46339093 46339235 -43165318 + MIR SINE MIR 84 238 -24 198 326 0 27 chr17 46339324 46339398 -43165155 + MIR SINE MIR 38 109 -107 1843 161 0 33 chr17 46340175 46340479 -43164074 - AluJo SINE Alu -15 297 4 288 70 0 0 chr17 46340775 46340818 -43163735 + (TG)n Simple_repeat Simple_repeat 2 44 0 321 306 39 78 chr17 46340931 46341111 -43163442 + MLT1K LTR MaLR 302 474 -114 235 175 0 70 chr17 46341111 46341168 -43163385 - MER91B DNA MER1_type -113 77 25 2355 105 0 0 chr17 46341219 46341523 -43163030 - AluSx SINE Alu -8 304 1 1832 166 0 20 chr17 46341526 46341828 -43162725 - AluJb SINE Alu -16 296 1 413 291 35 35 chr17 46342611 46342752 -43161801 - MIR3 SINE MIR -36 172 32 26 0 0 0 chr17 46343138 46343164 -43161389 + AT_rich Low_complexity Low_complexity 1 26 0 2581 54 0 3 chr17 46343607 46343905 -43160648 + AluY SINE Alu 1 297 -14 417 303 3 7 chr17 46344038 46344184 -43160369 - MIR SINE MIR -37 171 22 248 358 26 20 chr17 46344559 46344710 -43159843 - L2 LINE L2 -225 3047 2896 1927 149 31 3 chr17 46344734 46345023 -43159530 + AluJb SINE Alu 5 301 -11 3034 117 4 0 chr17 46345447 46345899 -43158654 + MER41B LTR ERV1 1 454 -181 2085 112 4 4 chr17 46345899 46346177 -43158376 + AluSx SINE Alu 1 278 -34 2410 89 0 3 chr17 46346516 46346820 -43157733 - AluSp SINE Alu -10 303 1 2035 95 81 14 chr17 46346962 46347245 -43157308 - AluSg SINE Alu -8 302 1 2541 59 10 3 chr17 46347686 46347993 -43156560 - AluY SINE Alu -2 309 1 2360 113 0 0 chr17 46348226 46348537 -43156016 + AluSq SINE Alu 1 311 -2 436 240 0 10 chr17 46348848 46348952 -43155601 + MIR3 SINE MIR 102 204 -4 252 271 108 23 chr17 46349410 46349539 -43155014 + MIR SINE MIR 81 220 -42 1941 114 107 0 chr17 46349570 46349841 -43154712 - AluSp SINE Alu -13 300 1 557 132 0 114 chr17 46350276 46350355 -43154198 + AluJo SINE Alu 59 123 -189 2469 87 0 7 chr17 46350355 46350665 -43153888 + AluSx SINE Alu 1 308 -4 557 132 0 114 chr17 46350665 46350699 -43153854 + AluJo SINE Alu 123 159 -153 455 113 0 0 chr17 46350704 46350775 -43153778 + Alu SINE Alu 234 304 -8 735 174 8 0 chr17 46350779 46350911 -43153642 + FLAM_C SINE Alu 1 133 0 25 0 0 0 chr17 46350911 46350936 -43153617 + AT_rich Low_complexity Low_complexity 1 25 0 2618 55 7 0 chr17 46351697 46352006 -43152547 + AluY SINE Alu 1 311 0 2633 47 3 0 chr17 46352212 46352512 -43152041 - AluY SINE Alu -10 301 1 962 41 107 0 chr17 46352517 46352639 -43151914 - AluY SINE Alu -176 135 1 1751 157 0 58 chr17 46353110 46353423 -43151130 + AluJb SINE Alu 1 295 -17 467 216 9 27 chr17 46354516 46354627 -43149926 + MIR SINE MIR 119 227 -35 1369 143 42 14 chr17 46354920 46354956 -43149597 + AluJo SINE Alu 86 120 -192 183 80 0 0 chr17 46354956 46354981 -43149572 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1369 143 42 14 chr17 46354981 46355160 -43149393 + AluJo SINE Alu 120 307 -5 2328 94 17 3 chr17 46355160 46355458 -43149095 + AluSq SINE Alu 1 302 -11 186 216 0 20 chr17 46355936 46355987 -43148566 - L2 LINE L2 -219 3053 3004 288 344 20 33 chr17 46356080 46356231 -43148322 + MIR3 SINE MIR 53 201 -7 210 288 178 0 chr17 46356390 46356463 -43148090 + L2 LINE L2 3182 3267 -5 180 196 250 0 chr17 46356732 46356788 -43147765 - MIR SINE MIR -11 251 182 296 295 275 0 chr17 46356849 46356998 -43147555 + MIR SINE MIR 73 262 0 414 0 0 0 chr17 46357836 46357882 -43146671 + (CA)n Simple_repeat Simple_repeat 2 47 0 224 261 14 0 chr17 46358266 46358335 -43146218 + C-rich Low_complexity Low_complexity 6 75 0 369 0 0 0 chr17 46358581 46358622 -43145931 + (CA)n Simple_repeat Simple_repeat 1 41 0 189 0 0 0 chr17 46360519 46360540 -43144013 + (GA)n Simple_repeat Simple_repeat 1 21 0 510 158 0 0 chr17 46363151 46363233 -43141320 + FRAM SINE Alu 41 122 -54 347 212 30 83 chr17 46363259 46363335 -43141218 + MER5A DNA MER1_type 59 127 -62 2228 129 0 0 chr17 46363335 46363646 -43140907 - AluSx SINE Alu -1 311 1 347 212 30 83 chr17 46363646 46363701 -43140852 + MER5A DNA MER1_type 127 183 -6 661 299 105 34 chr17 46364193 46364853 -43139700 - L2 LINE L2 0 3313 2560 2299 95 10 13 chr17 46365486 46365657 -43138896 - AluSg SINE Alu -5 305 134 2389 70 0 42 chr17 46365657 46365970 -43138583 - AluY SINE Alu -11 300 1 2299 95 10 13 chr17 46365970 46366104 -43138449 - AluSg SINE Alu -176 134 1 2171 120 3 10 chr17 46366104 46366405 -43138148 - AluSx SINE Alu -13 299 1 2331 108 3 6 chr17 46366419 46366733 -43137820 - AluSq SINE Alu 0 313 1 1006 85 85 90 chr17 46367011 46367211 -43137342 - MER30 DNA MER1_type 0 230 32 303 351 38 0 chr17 46367519 46367650 -43136903 + MIR3 SINE MIR 23 158 -50 234 0 0 0 chr17 46367673 46367699 -43136854 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2200 96 0 4 chr17 46367707 46367987 -43136566 - AluSg SINE Alu -31 279 1 1097 161 14 60 chr17 46368017 46368235 -43136318 + MER20 DNA MER1_type 12 219 0 243 91 0 0 chr17 46368240 46368273 -43136280 + Alu SINE Alu 1 33 -268 328 155 37 0 chr17 46368568 46368637 -43135916 + FLAM_A SINE Alu 69 130 -3 2181 121 10 0 chr17 46369613 46369920 -43134633 - AluSx SINE Alu 0 312 3 639 158 15 53 chr17 46369982 46370115 -43134438 + FLAM_C SINE Alu 5 132 -1 203 0 37 0 chr17 46370413 46370440 -43134113 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 311 102 0 0 chr17 46370458 46370507 -43134046 - AluSq SINE Alu -8 294 246 1004 111 0 0 chr17 46370509 46370635 -43133918 - AluSq SINE Alu -104 209 84 243 0 0 0 chr17 46371503 46371530 -43133023 + (CA)n Simple_repeat Simple_repeat 1 27 0 185 346 79 16 chr17 46374347 46374474 -43130079 + MIR SINE MIR 20 154 -108 23 0 0 0 chr17 46375349 46375372 -43129181 + AT_rich Low_complexity Low_complexity 1 23 0 781 188 0 0 chr17 46376371 46376504 -43128049 + FLAM_A SINE Alu 1 133 0 651 195 0 0 chr17 46377055 46377183 -43127370 + FLAM_C SINE Alu 10 137 -6 21 36 0 0 chr17 46377397 46377425 -43127128 + AT_rich Low_complexity Low_complexity 1 28 0 378 271 37 0 chr17 46378831 46378938 -43125615 + MIR SINE MIR 40 150 -58 2320 116 3 0 chr17 46379167 46379477 -43125076 - AluSx SINE Alu -1 311 1 2460 83 7 0 chr17 46379490 46379792 -43124761 - AluSp SINE Alu -9 304 1 2164 124 27 0 chr17 46380996 46381294 -43123259 + AluSx SINE Alu 1 306 -6 1933 113 0 0 chr17 46382316 46382564 -43121989 - AluSx SINE Alu -28 284 37 712 173 31 0 chr17 46382609 46382736 -43121817 + FLAM_C SINE Alu 2 132 -1 4934 135 16 23 chr17 46382772 46383677 -43120876 + L1MB4 LINE L1 5282 6179 -1 181 260 0 40 chr17 46383861 46383911 -43120642 + L2 LINE L2 3224 3271 -1 210 205 0 0 chr17 46384010 46384049 -43120504 + L2 LINE L2 3232 3270 -2 * 327 270 117 18 chr17 46384044 46384207 -43120346 - MIR SINE MIR 0 262 84 1824 161 3 25 chr17 46385510 46385827 -43118726 + AluJb SINE Alu 1 310 -2 272 204 204 30 chr17 46385940 46386072 -43118481 + L1ME4a LINE L1 5963 6117 -4 277 209 209 7 chr17 46386082 46386230 -43118323 + L1ME4a LINE L1 5879 6056 -65 23 0 0 0 chr17 46386263 46386286 -43118267 + AT_rich Low_complexity Low_complexity 1 23 0 753 256 113 26 chr17 46386558 46386772 -43117781 + MIR SINE MIR 13 250 -12 2124 136 0 3 chr17 46386772 46387074 -43117479 + AluSc SINE Alu 1 301 -8 753 256 113 26 chr17 46387074 46387089 -43117464 + MIR SINE MIR 250 262 0 783 297 44 38 chr17 46387133 46387682 -43116871 - L1ME4a LINE L1 -11 6110 5559 1382 192 4 12 chr17 46387904 46388154 -43116399 - AluJo SINE Alu -19 293 46 235 189 0 0 chr17 46388256 46388293 -43116260 - AluJo SINE Alu -264 38 2 1649 152 39 58 chr17 46388296 46388657 -43115896 + L1MB8 LINE L1 5744 6097 -81 1112 142 33 12 chr17 46388658 46388954 -43115599 - MER2 DNA MER2_type -2 343 8 240 150 0 0 chr17 46388954 46388994 -43115559 + L1MB7 LINE L1 6102 6141 -43 2274 88 3 0 chr17 46388994 46389313 -43115240 + AluSp SINE Alu 1 320 0 1290 166 0 48 chr17 46389320 46389373 -43115180 + AluJb SINE Alu 85 139 -173 2384 109 0 0 chr17 46389373 46389685 -43114868 + AluSq SINE Alu 1 312 -1 1290 166 0 48 chr17 46389685 46389860 -43114693 + AluJb SINE Alu 139 302 -10 300 185 0 0 chr17 46389874 46389928 -43114625 + L1MB7 LINE L1 6131 6184 0 209 312 153 13 chr17 46389979 46390136 -43114417 + L2 LINE L2 2865 3043 -229 212 274 96 14 chr17 46390238 46390311 -43114242 + L2 LINE L2 3189 3267 -5 2526 63 7 0 chr17 46390423 46390723 -43113830 + AluY SINE Alu 1 302 -9 2400 98 0 3 chr17 46392804 46393111 -43111442 + AluY SINE Alu 1 306 -5 220 304 191 9 chr17 46393159 46393274 -43111279 - L2 LINE L2 0 3272 3137 724 215 0 0 chr17 46393531 46393652 -43110901 + FLAM_C SINE Alu 3 123 -20 47 0 0 0 chr17 46393655 46393702 -43110851 + AT_rich Low_complexity Low_complexity 1 47 0 950 329 103 43 chr17 46393744 46394784 -43109769 - L2 LINE L2 -499 2815 1714 2291 84 0 7 chr17 46395728 46396034 -43108519 + AluSq SINE Alu 1 304 0 600 187 0 9 chr17 46396665 46396772 -43107781 + FLAM_C SINE Alu 2 107 -36 2332 92 0 29 chr17 46397378 46397692 -43106861 - AluSx SINE Alu -7 305 1 1314 186 11 0 chr17 46397916 46398179 -43106374 + L1MD3 LINE L1 7730 7995 0 265 262 0 16 chr17 46398467 46398528 -43106025 - L2 LINE L2 0 3313 3254 204 40 0 0 chr17 46398861 46398886 -43105667 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 46399462 46399490 -43105063 + (TG)n Simple_repeat Simple_repeat 2 29 0 478 292 7 28 chr17 46399605 46399749 -43104804 - L2 LINE L2 -4 3309 3169 345 326 14 7 chr17 46400077 46400221 -43104332 + CT-rich Low_complexity Low_complexity 3 147 0 232 295 0 0 chr17 46400621 46400682 -43103871 + MIR SINE MIR 90 150 -112 398 295 9 0 chr17 46401193 46401305 -43103248 + MIR SINE MIR 39 151 -57 1845 124 55 11 chr17 46401636 46401950 -43102603 + AluSg SINE Alu 1 310 0 592 228 47 29 chr17 46401951 46402167 -43102386 - MIR SINE MIR -8 254 37 209 196 0 0 chr17 46402864 46402910 -43101643 + (CTAAG)n Simple_repeat Simple_repeat 4 49 0 414 306 102 34 chr17 46404686 46404921 -43099632 - MIR SINE MIR 0 262 12 2159 116 3 7 chr17 46404960 46405253 -43099300 - AluSx SINE Alu -18 294 3 406 216 41 21 chr17 46405366 46405463 -43099090 - MIR3 SINE MIR -28 180 82 270 0 0 0 chr17 46405463 46405493 -43099060 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 777 134 134 8 chr17 46405823 46405950 -43098603 + AluSq/x SINE Alu 2 144 -169 1938 101 43 0 chr17 46405953 46406210 -43098343 + AluSx SINE Alu 28 295 -17 2269 75 0 37 chr17 46406213 46406550 -43098003 + AluY SINE Alu 1 326 0 2211 135 0 16 chr17 46406550 46406686 -43097867 + AluSq SINE Alu 1 138 -175 2495 61 0 26 chr17 46406686 46406997 -43097556 + AluY SINE Alu 1 303 -8 2211 135 0 16 chr17 46406997 46407178 -43097375 + AluSq SINE Alu 138 313 0 207 0 0 0 chr17 46407417 46407440 -43097113 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 308 390 29 0 chr17 46407455 46407591 -43096962 - L2 LINE L2 -27 3245 3106 2183 144 0 0 chr17 46407623 46407928 -43096625 + AluSx SINE Alu 1 305 -7 2196 142 3 0 chr17 46408039 46408369 -43096184 + AluSx SINE Alu 1 331 0 210 231 0 25 chr17 46409225 46409346 -43095207 + (CA)n Simple_repeat Simple_repeat 1 118 0 342 284 18 12 chr17 46409357 46409526 -43095027 + (CA)n Simple_repeat Simple_repeat 2 171 0 290 170 19 19 chr17 46409559 46409665 -43094888 + (CA)n Simple_repeat Simple_repeat 1 106 0 2354 108 0 7 chr17 46409690 46409995 -43094558 - AluSx SINE Alu -9 303 1 2594 63 0 0 chr17 46410010 46410309 -43094244 - AluSg SINE Alu -10 300 2 2446 61 6 52 chr17 46410516 46410842 -43093711 - AluY SINE Alu 0 311 1 527 237 147 31 chr17 46410858 46411011 -43093542 - L1ME3A LINE L1 -6 6164 5975 2237 115 7 0 chr17 46411011 46411316 -43093237 - AluSq SINE Alu -6 307 1 527 237 147 31 chr17 46411316 46411386 -43093167 - L1ME3A LINE L1 -195 5975 5915 391 284 165 0 chr17 46411580 46411707 -43092846 + MIR3 SINE MIR 30 177 -31 285 216 0 0 chr17 46411688 46411739 -43092814 - MIR SINE MIR -1 261 211 * 1252 151 75 98 chr17 46411774 46411869 -43092684 + MER58B DNA MER1_type 37 133 -2287 1773 154 11 4 chr17 46411869 46412149 -43092404 + AluJo SINE Alu 1 282 -30 2234 118 0 0 chr17 46412153 46412449 -43092104 - AluSx SINE Alu -16 296 1 1252 151 75 98 chr17 46412449 46412460 -43092093 + MER58B DNA MER1_type 136 146 -2274 180 77 0 0 chr17 46412460 46412486 -43092067 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 890 74 41 0 chr17 46412487 46412608 -43091945 + L1PA13 LINE L1 6038 6163 0 1252 151 75 98 chr17 46412608 46412798 -43091755 + MER58B DNA MER1_type 145 334 -7 2323 118 0 0 chr17 46412798 46413103 -43091450 + AluSq SINE Alu 1 305 -8 180 222 44 0 chr17 46413296 46413341 -43091212 - MER5C DNA MER1_type -184 140 94 1874 144 31 7 chr17 46413597 46413889 -43090664 - AluJo SINE Alu -9 303 5 1013 251 35 57 chr17 46414028 46414398 -43090155 - L1ME3 LINE L1 -8 6154 5793 248 327 118 0 chr17 46414487 46414685 -43089868 - L1ME3 LINE L1 -397 5767 5536 481 236 134 4 chr17 46415501 46415668 -43088885 - MIR SINE MIR 0 262 72 256 304 61 17 chr17 46415967 46416082 -43088471 + L2 LINE L2 2917 3036 -236 219 233 185 79 chr17 46416185 46416232 -43088321 + MIR SINE MIR 54 95 -167 2460 91 3 0 chr17 46416232 46416541 -43088012 - AluSp SINE Alu -1 312 3 219 233 185 79 chr17 46416541 46416682 -43087871 + MIR SINE MIR 95 262 0 * 362 186 43 0 chr17 46416681 46416751 -43087802 + L2 LINE L2 3182 3254 -18 298 261 90 18 chr17 46417208 46417319 -43087234 + MIR3 SINE MIR 54 172 -36 189 170 43 43 chr17 46418108 46418155 -43086398 - L2 LINE L2 0 3272 3226 215 350 60 0 chr17 46418744 46418861 -43085692 + L2 LINE L2 2933 3056 -257 271 298 0 23 chr17 46418938 46419035 -43085518 + MIR SINE MIR 28 119 -89 810 192 92 63 chr17 46419136 46419309 -43085244 - MER58B DNA MER1_type -2088 332 147 1944 141 24 3 chr17 46419309 46419600 -43084953 + AluSx SINE Alu 1 297 -15 810 192 92 63 chr17 46419600 46419697 -43084856 - MER58B DNA MER1_type -2273 147 54 526 128 26 0 chr17 46419810 46419888 -43084665 + AluSc SINE Alu 197 276 -33 231 36 0 0 chr17 46419888 46419916 -43084637 + (CA)n Simple_repeat Simple_repeat 1 28 0 253 185 74 0 chr17 46419917 46419971 -43084582 + L1MC/D LINE L1 5853 5910 -1898 1685 174 7 27 chr17 46420342 46420496 -43084057 - AluJb SINE Alu -25 287 140 2102 104 7 3 chr17 46420496 46420783 -43083770 - AluSg SINE Alu -18 292 5 1685 174 7 27 chr17 46420783 46420921 -43083632 - AluJb SINE Alu -172 140 1 620 184 0 0 chr17 46421547 46421645 -43082908 - AluJ SINE Alu -19 293 196 * 643 177 18 0 chr17 46421643 46421756 -43082797 - AluJ SINE Alu -196 116 2 1032 182 0 0 chr17 46421814 46421984 -43082569 - FRAM SINE Alu -5 171 2 1105 173 96 37 chr17 46421992 46422235 -43082318 - L1MB7 LINE L1 -48 6136 5874 1717 162 10 36 chr17 46422235 46422402 -43082151 - AluJb SINE Alu -15 297 140 2216 115 3 0 chr17 46422402 46422698 -43081855 - AluSq SINE Alu -14 299 3 1717 162 10 36 chr17 46422698 46422833 -43081720 - AluJb SINE Alu -172 140 3 1105 173 96 37 chr17 46422833 46422860 -43081693 - L1MB7 LINE L1 -310 5874 5850 25 0 0 0 chr17 46423159 46423184 -43081369 + AT_rich Low_complexity Low_complexity 1 25 0 1943 119 12 35 chr17 46423192 46423511 -43081042 + AluSx SINE Alu 1 312 0 839 142 0 0 chr17 46423527 46423640 -43080913 - FLAM_C SINE Alu -25 118 6 756 297 188 36 chr17 46423699 46424128 -43080425 + L2 LINE L2 2227 2589 -683 2180 127 0 13 chr17 46424128 46424443 -43080110 + AluSp SINE Alu 1 311 -2 756 297 188 36 chr17 46424443 46424886 -43079667 + L2 LINE L2 2589 3222 -50 2402 60 3 0 chr17 46424996 46425278 -43079275 - AluSc SINE Alu -20 289 7 2197 106 3 7 chr17 46425419 46425712 -43078841 - AluSx SINE Alu -20 292 1 817 324 88 46 chr17 46426044 46426544 -43078009 + L3 LINE CR1 1056 1576 -1 2117 138 3 0 chr17 46427171 46427469 -43077084 + AluSx SINE Alu 5 303 -9 2322 105 0 7 chr17 46427469 46427775 -43076778 + AluSq SINE Alu 1 304 -9 351 296 51 67 chr17 46428035 46428149 -43076404 + L1ME3 LINE L1 5516 5630 -540 1723 185 3 14 chr17 46428149 46428446 -43076107 - AluJo SINE Alu -18 294 1 351 296 51 67 chr17 46428446 46428928 -43075625 + L1ME3 LINE L1 5630 6090 -80 2244 99 7 7 chr17 46429127 46429420 -43075133 - AluSx SINE Alu -19 293 1 1948 160 6 6 chr17 46429786 46430098 -43074455 - AluJo SINE Alu 0 312 1 1595 209 7 17 chr17 46430338 46430640 -43073913 + AluJb SINE Alu 1 299 -13 302 342 72 0 chr17 46430651 46430762 -43073791 + L2 LINE L2 3116 3234 -38 2516 76 0 6 chr17 46430802 46431116 -43073437 + AluSx SINE Alu 1 312 0 1540 161 67 4 chr17 46431260 46431514 -43073039 - AluSx SINE Alu -42 270 1 1398 139 0 0 chr17 46431544 46431745 -43072808 + AluSg SINE Alu 1 201 -109 335 185 0 0 chr17 46431747 46431801 -43072752 + FLAM SINE Alu 71 124 -9 2023 102 3 25 chr17 46431809 46432137 -43072416 + AluSc SINE Alu 1 322 0 2144 73 14 4 chr17 46432161 46432460 -43072093 + AluY SINE Alu 7 308 0 345 316 9 18 chr17 46432460 46432574 -43071979 - MIR SINE MIR -148 114 2 190 300 0 17 chr17 46432580 46432640 -43071913 + MIR SINE MIR 154 212 -50 450 298 9 88 chr17 46433343 46433558 -43070995 - MIR SINE MIR -50 212 15 187 335 72 72 chr17 46433678 46433845 -43070708 + L2 LINE L2 3054 3220 -52 785 308 75 58 chr17 46434575 46435622 -43068931 - L2 LINE L2 0 3272 2158 207 304 0 14 chr17 46435662 46435731 -43068822 + MIR SINE MIR 189 256 -6 1718 163 0 67 chr17 46435760 46435890 -43068663 + AluJo SINE Alu 1 138 -174 2334 68 4 0 chr17 46435890 46436200 -43068353 - AluY SINE Alu 0 311 1 1718 163 0 67 chr17 46436200 46436381 -43068172 + AluJo SINE Alu 138 292 -20 351 184 9 28 chr17 46436931 46437040 -43067513 + (TCCA)n Simple_repeat Simple_repeat 2 108 0 322 281 107 8 chr17 46437040 46437161 -43067392 - L2 LINE L2 0 3313 3181 200 310 70 14 chr17 46437376 46437447 -43067106 + MIR SINE MIR 78 152 -56 377 299 21 0 chr17 46437481 46437578 -43066975 + MER81 DNA DNA 1 99 -15 1953 123 56 7 chr17 46437812 46438096 -43066457 - AluSx SINE Alu -14 298 1 2421 87 3 0 chr17 46438104 46438402 -43066151 - AluSp SINE Alu -14 299 1 2410 62 0 7 chr17 46438674 46438966 -43065587 - AluY SINE Alu -21 290 1 751 125 0 0 chr17 46439497 46439601 -43064952 - U6 snRNA snRNA 0 107 4 180 77 0 0 chr17 46439913 46439939 -43064614 + (TG)n Simple_repeat Simple_repeat 2 27 0 1478 134 32 0 chr17 46440641 46440904 -43063649 + AluJo SINE Alu 89 358 0 679 252 79 26 chr17 46441138 46441404 -43063149 + LTR16A1 LTR ERVL 178 457 0 2299 107 0 0 chr17 46441505 46441804 -43062749 + AluSx SINE Alu 1 299 -13 194 340 126 34 chr17 46442426 46442580 -43061973 - L3b LINE CR1 -82 1501 1322 1664 176 30 20 chr17 46442580 46442882 -43061671 - AluJo SINE Alu -7 305 1 194 340 126 34 chr17 46442882 46442933 -43061620 - L3b LINE CR1 -261 1322 1277 2063 121 29 0 chr17 46442994 46443324 -43061229 + AluSg SINE Alu 1 298 -12 1291 185 33 13 chr17 46443336 46443641 -43060912 - MER33 DNA MER1_type -22 302 1 180 74 0 0 chr17 46443960 46443987 -43060566 + L2 LINE L2 3027 3053 -219 1150 180 14 24 chr17 46444011 46444222 -43060331 + AluJb SINE Alu 104 312 0 502 243 59 0 chr17 46444275 46444411 -43060142 - MIR3 SINE MIR -7 201 58 223 186 0 34 chr17 46444738 46444797 -43059756 + C-rich Low_complexity Low_complexity 5 61 0 32 0 0 0 chr17 46445327 46445359 -43059194 + AT_rich Low_complexity Low_complexity 1 32 0 2566 75 3 0 chr17 46445362 46445668 -43058885 + AluSp SINE Alu 1 307 -6 486 300 122 8 chr17 46445801 46446038 -43058515 + L1MC4a LINE L1 5576 5839 -1969 409 273 112 54 chr17 46446096 46446275 -43058278 + L1ME4a LINE L1 5840 6034 -87 2072 157 0 0 chr17 46446275 46446580 -43057973 - AluJo SINE Alu -7 305 1 409 273 112 54 chr17 46446580 46446605 -43057948 + L1ME4a LINE L1 6034 6056 -65 21 0 0 0 chr17 46447117 46447138 -43057415 + GC_rich Low_complexity Low_complexity 1 21 0 701 162 15 37 chr17 46447971 46448107 -43056446 + AluSq/x SINE Alu 2 134 -179 237 175 149 70 chr17 46448680 46448794 -43055759 + MIR3 SINE MIR 15 137 -71 1967 145 35 0 chr17 46448984 46449274 -43055279 + AluSx SINE Alu 1 300 -12 964 83 0 0 chr17 46450611 46450743 -43053810 - FLAM_C SINE Alu -1 132 1 194 312 165 9 chr17 46454042 46454151 -43050402 - MIR SINE MIR -54 208 83 2179 110 7 0 chr17 46454166 46454467 -43050086 + AluSx SINE Alu 6 308 -4 2328 85 0 0 chr17 46454482 46454798 -43049755 + AluSx SINE Alu 1 316 0 2188 78 4 4 chr17 46455239 46455546 -43049007 - AluSp SINE Alu 0 324 18 593 303 54 0 chr17 46455978 46456163 -43048390 - MIR SINE MIR -16 246 52 448 110 55 0 chr17 46456523 46456596 -43047957 + U6 snRNA snRNA 31 107 0 2475 68 0 0 chr17 46456617 46456912 -43047641 - AluY SINE Alu -16 295 1 1153 135 6 0 chr17 46456912 46457075 -43047478 - FRAM SINE Alu -13 163 1 366 234 117 23 chr17 46457182 46457310 -43047243 + L2 LINE L2 3133 3272 0 252 165 114 131 chr17 46457594 46457680 -43046873 + MIR3 SINE MIR 24 110 -98 2247 86 3 7 chr17 46457680 46457971 -43046582 + AluSx SINE Alu 1 290 -22 252 165 114 131 chr17 46457971 46458060 -43046493 + MIR3 SINE MIR 110 196 -12 932 199 0 6 chr17 46458762 46458928 -43045625 - AluJb SINE Alu -14 298 134 2151 101 31 0 chr17 46458928 46459215 -43045338 - AluSx SINE Alu -16 296 1 390 304 96 66 chr17 46459217 46459625 -43044928 - L2 LINE L2 -943 2371 1952 451 259 18 0 chr17 46460300 46460412 -43044141 - MER81 DNA DNA 0 114 1 584 241 30 24 chr17 46460466 46460632 -43043921 + MER45C DNA AcHobo 702 868 -85 229 128 0 43 chr17 46460629 46460676 -43043877 - Alu SINE Alu -4 171 127 * 1279 162 9 57 chr17 46460676 46460766 -43043787 - AluJb SINE Alu -92 220 127 243 0 22 67 chr17 46460766 46460811 -43043742 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2277 79 0 24 chr17 46460813 46461104 -43043449 - AluSc SINE Alu -25 284 1 2398 80 10 0 chr17 46461106 46461406 -43043147 - AluSp SINE Alu -10 303 1 1279 162 9 57 chr17 46461406 46461538 -43043015 - AluJb SINE Alu -187 125 3 216 111 0 67 chr17 46461550 46461595 -43042958 + (TTTTTA)n Simple_repeat Simple_repeat 1 42 0 854 144 0 0 chr17 46461599 46461724 -43042829 - FLAM_C SINE Alu -8 125 1 2131 121 14 0 chr17 46461733 46462023 -43042530 - AluSg SINE Alu -16 294 1 256 197 15 45 chr17 46462105 46462171 -43042382 + AluJ/FRAM SINE Alu 224 287 -15 330 87 0 0 chr17 46462414 46462460 -43042093 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 433 86 0 0 chr17 46462460 46462518 -43042035 + Alu SINE Alu 2 59 -259 231 204 0 108 chr17 46462571 46462664 -43041889 + MER96B DNA MER1_type? 8 90 -327 349 183 96 58 chr17 46462694 46462798 -43041755 + MER96B DNA MER1_type? 310 417 0 306 324 9 0 chr17 46462800 46462905 -43041648 + MIR SINE MIR 147 252 -10 342 283 36 118 chr17 46463315 46463672 -43040881 - L2 LINE L2 -1 3271 2944 1653 65 4 69 chr17 46464246 46464439 -43040114 - AluSg/x SINE Alu 0 312 151 2360 94 0 7 chr17 46464439 46464748 -43039805 - AluSc SINE Alu -1 308 2 1653 65 4 69 chr17 46464748 46464825 -43039728 - AluSg/x SINE Alu -161 151 71 888 103 0 0 chr17 46464825 46464941 -43039612 - AluY SINE Alu -194 117 2 1418 64 0 5 chr17 46465112 46465300 -43039253 + U2 snRNA snRNA 1 187 -1 2373 104 0 0 chr17 46465581 46465888 -43038665 - AluSq SINE Alu -6 307 1 242 276 0 26 chr17 46466185 46466261 -43038292 + L2 LINE L2 185 258 -3056 687 213 38 6 chr17 46466315 46466475 -43038078 + FRAM SINE Alu 2 166 0 880 141 0 27 chr17 46466543 46466692 -43037861 + AluJb SINE Alu 167 311 -1 320 336 26 42 chr17 46466758 46467142 -43037411 + ERVL LTR ERVL 5002 5379 -385 730 146 99 26 chr17 46468181 46468332 -43036221 + MER34 LTR ERV1 381 542 0 1201 233 61 12 chr17 46468333 46468677 -43035876 - L1ME1 LINE L1 -159 6007 5647 711 149 0 0 chr17 46468864 46468985 -43035568 + (TC)n Simple_repeat Simple_repeat 1 121 0 844 171 66 0 chr17 46468985 46469137 -43035416 - AluJb SINE Alu -15 297 136 438 268 191 13 chr17 46469492 46469649 -43034904 - MER5A DNA MER1_type -1 188 4 1754 135 6 75 chr17 46469706 46469860 -43034693 + AluJb SINE Alu 1 123 -189 2152 123 21 0 chr17 46469860 46470144 -43034409 + AluSx SINE Alu 1 290 -22 1754 135 6 75 chr17 46470144 46470308 -43034245 + AluJb SINE Alu 123 297 -15 2406 84 3 16 chr17 46470309 46470620 -43033933 + AluSp SINE Alu 1 307 -6 252 331 31 19 chr17 46471345 46471505 -43033048 + L1M4 LINE L1 4823 4984 -1162 1663 171 7 4 chr17 46471656 46471925 -43032628 - AluJb SINE Alu -3 309 40 367 125 0 0 chr17 46471939 46471994 -43032559 - AluSp SINE Alu -44 259 205 1655 175 21 3 chr17 46471994 46472279 -43032274 - LTR10B LTR ERV1 0 547 258 230 137 98 0 chr17 46472382 46472433 -43032120 - LTR10B LTR ERV1 -491 56 1 1272 247 21 0 chr17 46472435 46472726 -43031827 - LTR10B-int LTR ERV1 -1 6648 6352 1640 61 5 10 chr17 46472726 46472922 -43031631 - AluSp SINE Alu -108 205 11 839 156 0 50 chr17 46472943 46473103 -43031450 + AluSg/x SINE Alu 159 310 0 269 263 53 0 chr17 46473397 46473473 -43031080 - MIR SINE MIR -90 172 93 1812 166 55 1 chr17 46473808 46474131 -43030422 + THE1B LTR MaLR 24 364 0 257 260 19 29 chr17 46475337 46475441 -43029112 + (TCTCTG)n Simple_repeat Simple_repeat 2 104 0 249 230 54 27 chr17 46475484 46475558 -43028995 + L2 LINE L2 3193 3268 -4 572 191 14 187 chr17 46476251 46476529 -43028024 + L2 LINE L2 3079 3308 -5 22 0 0 0 chr17 46476994 46477016 -43027537 + AT_rich Low_complexity Low_complexity 1 22 0 1644 186 0 4 chr17 46477260 46477529 -43027024 - AluJo SINE Alu -44 268 1 865 114 8 0 chr17 46477542 46477665 -43026888 - FLAM_C SINE Alu -8 125 2 227 244 26 39 chr17 46477734 46477812 -43026741 + MIR3 SINE MIR 126 202 -6 1953 137 3 0 chr17 46477873 46478157 -43026396 + AluSx SINE Alu 8 292 -20 567 207 39 60 chr17 46478170 46478345 -43026208 + L1MD2 LINE L1 6093 6358 0 206 62 31 0 chr17 46478909 46478941 -43025612 + (CCCCCT)n Simple_repeat Simple_repeat 3 35 0 2534 37 7 3 chr17 46479094 46479392 -43025161 - AluY SINE Alu -11 300 2 1892 91 14 81 chr17 46479609 46479906 -43024647 - AluSq SINE Alu -36 277 1 829 225 89 40 chr17 46480586 46480888 -43023665 + LTR52 LTR ERVL 93 409 -12 329 312 19 45 chr17 46481136 46481290 -43023263 - MER5B DNA MER1_type -28 150 1 373 127 113 0 chr17 46481596 46481667 -43022886 - L1 LINE L1 -1888 4258 4180 1883 192 3 0 chr17 46481679 46481987 -43022566 - AluJb SINE Alu -2 310 2 1227 204 195 9 chr17 46482074 46482086 -43022467 - L1M1 LINE L1 -5323 2242 2234 1950 123 38 3 chr17 46482086 46482379 -43022174 - AluSp SINE Alu -10 303 1 1227 204 195 9 chr17 46482379 46482710 -43021843 - L1M1 LINE L1 -5331 2234 1835 7348 98 5 15 chr17 46482732 46483800 -43020753 - MER11C LTR ERVK -14 1057 1 2061 187 118 5 chr17 46483800 46484222 -43020331 - L1M1 LINE L1 -5710 1855 1386 2045 131 20 0 chr17 46484341 46484639 -43019914 + AluSx SINE Alu 1 304 -8 702 251 17 6 chr17 46485028 46485203 -43019350 - U2 snRNA snRNA -6 182 6 2158 98 3 3 chr17 46485527 46485814 -43018739 - AluSg SINE Alu -23 287 1 600 272 35 9 chr17 46486309 46486537 -43018016 - L2 LINE L2 -643 2671 2438 312 98 0 33 chr17 46486537 46486598 -43017955 + AluSp/q SINE Alu 240 298 -5 2241 109 0 7 chr17 46486602 46486895 -43017658 + AluSx SINE Alu 2 292 -20 650 187 251 40 chr17 46486910 46487161 -43017392 + L1MC4 LINE L1 7608 7911 -131 212 143 0 0 chr17 46487193 46487228 -43017325 + (GA)n Simple_repeat Simple_repeat 2 36 0 262 154 15 15 chr17 46487256 46487321 -43017232 + GA-rich Low_complexity Low_complexity 1 65 0 243 281 49 0 chr17 46487391 46487473 -43017080 + L1MC4 LINE L1 7957 8042 0 2161 133 0 0 chr17 46487480 46487773 -43016780 + AluSx SINE Alu 1 293 -19 2034 147 0 0 chr17 46487775 46488092 -43016461 + AluSx SINE Alu 1 317 0 1197 239 81 81 chr17 46488092 46488711 -43015842 - L2 LINE L2 -1480 1834 1216 325 171 79 0 chr17 46488799 46488875 -43015678 + Looper DNA T2_type 48 129 -1429 1221 149 0 0 chr17 46488916 46489091 -43015462 - AluSx SINE Alu -18 294 120 3913 168 62 64 chr17 46489324 46490150 -43014403 - LTR13 LTR ERVK 0 954 129 2224 87 0 21 chr17 46490150 46490436 -43014117 - AluY SINE Alu -3 308 29 3913 168 62 64 chr17 46490436 46490565 -43013988 - LTR13 LTR ERVK -825 129 1 578 243 23 37 chr17 46490746 46490960 -43013593 + LTR4 LTR ERV1 385 595 -1 814 154 0 8 chr17 46490960 46491083 -43013470 - AluSx SINE Alu -186 126 5 355 145 0 43 chr17 46491099 46491168 -43013385 + Looper DNA T2_type 149 214 -1344 1429 176 113 19 chr17 46491170 46491489 -43013064 - MER90 LTR ERV1 0 614 266 532 217 16 8 chr17 46491536 46491669 -43012884 + Looper DNA T2_type 205 338 -1220 2328 91 17 0 chr17 46491679 46491975 -43012578 + AluSg SINE Alu 1 301 -9 383 217 310 19 chr17 46491975 46492347 -43012206 - L2 LINE L2 -2309 1005 552 626 100 0 0 chr17 46492656 46492736 -43011817 - LTR8 LTR ERV1 -8 683 604 1656 148 4 11 chr17 46492737 46493015 -43011538 + AluSx SINE Alu 1 276 -36 1574 153 4 8 chr17 46493360 46493621 -43010932 + AluJo SINE Alu 31 290 -22 230 276 0 0 chr17 46493829 46493887 -43010666 - MIR3 SINE MIR -11 197 140 2039 90 0 48 chr17 46494932 46495243 -43009310 - AluSq SINE Alu -17 296 1 1852 148 0 0 chr17 46495613 46495919 -43008634 + AluJb SINE Alu 1 306 0 586 202 17 0 chr17 46496201 46496320 -43008233 - MER5B DNA MER1_type -3 175 55 2105 107 7 0 chr17 46496321 46496619 -43007934 - AluSx SINE Alu -12 300 1 1096 180 0 40 chr17 46496637 46496865 -43007688 - MER20 DNA MER1_type 0 219 1 585 122 255 0 chr17 46496950 46497048 -43007505 - FLAM_C SINE Alu -18 125 3 752 113 9 0 chr17 46497057 46497163 -43007390 - U6 snRNA snRNA 0 107 1 339 193 57 23 chr17 46497289 46497377 -43007176 - MLT1J LTR MaLR -369 142 52 523 285 75 11 chr17 46497407 46497593 -43006960 + MLT1J LTR MaLR 240 437 -74 2352 81 0 0 chr17 46497594 46497901 -43006652 + AluSg1 SINE Alu 1 307 -2 2278 103 0 0 chr17 46498155 46498467 -43006086 + AluSx SINE Alu 1 312 0 191 308 0 0 chr17 46498799 46498838 -43005715 - MIR SINE MIR -95 113 75 2363 68 3 10 chr17 46499916 46500224 -43004329 - AluY SINE Alu -5 306 1 814 209 0 39 chr17 46500400 46500417 -43004136 - AluJo/FRAM SINE Alu 0 312 296 2368 65 0 31 chr17 46500417 46500738 -43003815 - AluY SINE Alu 0 311 1 814 209 0 39 chr17 46500738 46500902 -43003651 - AluJo/FRAM SINE Alu -16 296 138 224 286 29 43 chr17 46501183 46501253 -43003300 - MIR SINE MIR -174 88 20 257 360 9 9 chr17 46501835 46501946 -43002607 - MIR SINE MIR -119 143 33 628 112 0 10 chr17 46502970 46503068 -43001485 - AluJ/FRAM SINE Alu 0 312 216 1469 171 27 31 chr17 46503079 46503372 -43001181 - AluJo SINE Alu -17 295 4 821 165 0 0 chr17 46503506 46503639 -43000914 - FLAM_C SINE Alu -10 133 1 2214 53 53 0 chr17 46503891 46504174 -43000379 + AluY SINE Alu 1 298 -13 1774 141 31 3 chr17 46504580 46504870 -42999683 + AluSx SINE Alu 1 298 -14 2230 106 0 3 chr17 46505107 46505418 -42999135 - AluSq SINE Alu -3 310 1 453 269 67 40 chr17 46505493 46505642 -42998911 + MIR SINE MIR 102 254 -8 549 254 0 0 chr17 46505983 46506093 -42998460 + MER81 DNA DNA 5 114 0 1074 225 14 9 chr17 46506227 46506445 -42998108 + MIR SINE MIR 44 262 0 16866 222 15 14 chr17 46506604 46510096 -42994457 - HERVK13 LTR ERVK -2464 5652 2046 189 0 0 0 chr17 46510096 46510117 -42994436 + (CA)n Simple_repeat Simple_repeat 1 21 0 16866 222 15 14 chr17 46510117 46510554 -42993999 - HERVK13 LTR ERVK -6070 2046 1611 32 0 0 0 chr17 46510832 46510864 -42993689 + AT_rich Low_complexity Low_complexity 1 32 0 297 148 37 0 chr17 46511109 46511190 -42993363 + (TA)n Simple_repeat Simple_repeat 2 85 0 26 30 0 0 chr17 46511595 46511628 -42992925 + AT_rich Low_complexity Low_complexity 1 33 0 2140 214 45 88 chr17 46511628 46512323 -42992230 - HERVK13 LTR ERVK -6489 1627 963 331 188 77 103 chr17 46512477 46512594 -42991959 - HERVK13 LTR ERVK -7248 868 755 3253 227 28 15 chr17 46512702 46513425 -42991128 - HERVK13 LTR ERVK -7384 732 1 7681 90 14 0 chr17 46513425 46514418 -42990135 - LTR13 LTR ERVK 0 1007 1 328 153 17 0 chr17 46514420 46514479 -42990074 - HERVK13 LTR ERVK -7337 779 720 * 3816 215 21 18 chr17 46514451 46515052 -42989501 - HERVK13 LTR ERVK -7296 820 215 2241 44 0 0 chr17 46515052 46515323 -42989230 - AluY SINE Alu 0 311 41 3816 215 21 18 chr17 46515323 46515539 -42989014 - HERVK13 LTR ERVK -7901 215 1 4850 171 55 40 chr17 46515540 46516531 -42988022 - LTR13 LTR ERVK -1 1006 1 3163 147 66 1 chr17 46517049 46517571 -42986982 - MER41C LTR ERV1 0 554 1 987 136 7 7 chr17 46517571 46517725 -42986828 - MER41C-int LTR ERV1 0 7756 7603 427 322 121 10 chr17 46518002 46518201 -42986352 + MIR SINE MIR 34 254 -8 1460 134 0 9 chr17 46518449 46518666 -42985887 - AluSx SINE Alu -46 266 52 2150 157 211 30 chr17 46518693 46519190 -42985363 - LTR18B LTR ERVL -27 587 1 380 168 0 23 chr17 46519190 46519267 -42985286 - AluSx SINE Alu -252 56 2 323 167 24 95 chr17 46519271 46519355 -42985198 - MER74A LTR ERVL -185 373 296 6528 74 20 58 chr17 46519369 46521091 -42983462 - SVA Other Other -518 1386 344 392 212 0 0 chr17 46521091 46521157 -42983396 + Tigger1 DNA MER2_type 2353 2418 0 1226 140 9 13 chr17 46521487 46521715 -42982838 - SVA Other Other -733 653 427 800 225 6 28 chr17 46521909 46521958 -42982595 - MER45A DNA AcHobo -1403 178 129 2301 88 0 0 chr17 46521958 46522253 -42982300 + AluSq SINE Alu 1 295 -18 800 225 6 28 chr17 46522253 46522385 -42982168 - MER45A DNA AcHobo -1452 129 1 202 294 0 47 chr17 46523100 46523185 -42981368 + GA-rich Low_complexity Low_complexity 5 85 0 208 194 48 32 chr17 46523271 46523333 -42981220 + L2 LINE L2 2981 3043 -229 692 271 68 0 chr17 46523436 46523613 -42980940 - MIR SINE MIR -70 192 4 530 87 0 0 chr17 46523642 46523711 -42980842 + FLAM SINE Alu 56 124 -19 348 283 71 18 chr17 46523752 46523865 -42980688 + L2 LINE L2 3142 3260 -12 679 212 0 71 chr17 46523910 46523983 -42980570 + L1MB7 LINE L1 5203 5280 -866 2149 109 0 0 chr17 46523983 46524300 -42980253 + AluSq SINE Alu 1 317 0 679 212 0 71 chr17 46524300 46524437 -42980116 + L1MB7 LINE L1 5280 5399 -747 569 164 52 52 chr17 46524437 46524571 -42979982 + AluJo SINE Alu 1 134 -178 1540 157 35 31 chr17 46524608 46524895 -42979658 + AluJb SINE Alu 16 303 -9 255 161 0 0 chr17 46524896 46524952 -42979601 + L1MA5 LINE L1 6245 6300 0 303 173 0 0 chr17 46524977 46525029 -42979524 + L2 LINE L2 3258 3309 -4 2098 118 0 0 chr17 46525158 46525445 -42979108 + AluSx SINE Alu 10 296 -16 2594 155 21 21 chr17 46525455 46525932 -42978621 + L1MB7 LINE L1 5650 6126 -58 1334 174 40 54 chr17 46525980 46526150 -42978403 - AluJo SINE Alu -10 302 131 495 48 0 0 chr17 46526150 46526212 -42978341 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1334 174 40 54 chr17 46526212 46526303 -42978250 - AluJo SINE Alu -181 131 40 2139 95 3 3 chr17 46526303 46526597 -42977956 - AluSp SINE Alu -19 294 1 2157 114 0 0 chr17 46526597 46526894 -42977659 - AluSx SINE Alu -15 297 1 1334 174 40 54 chr17 46526894 46526928 -42977625 - AluJo SINE Alu -270 42 9 709 135 0 0 chr17 46526967 46527071 -42977482 - U6 snRNA snRNA -2 105 2 28 0 0 0 chr17 46527307 46527335 -42977218 + AT_rich Low_complexity Low_complexity 1 28 0 785 197 0 64 chr17 46527415 46527603 -42976950 - MER5B DNA MER1_type 0 178 3 568 283 73 57 chr17 46528609 46528778 -42975775 - MIR SINE MIR 0 262 86 1748 164 3 3 chr17 46528778 46529076 -42975477 + AluJb SINE Alu 1 298 -14 568 283 73 57 chr17 46529076 46529153 -42975400 - MIR SINE MIR -176 86 12 364 177 0 0 chr17 46529154 46529216 -42975337 - MER91B DNA MER1_type -128 62 1 21 57 0 0 chr17 46529396 46529431 -42975122 + AT_rich Low_complexity Low_complexity 1 35 0 1399 198 17 14 chr17 46529964 46530252 -42974301 + HERVK13 LTR ERVK 7828 8116 0 3723 180 49 68 chr17 46530262 46531234 -42973319 + LTR13 LTR ERVK 1 954 0 6154 122 42 29 chr17 46531234 46532224 -42972329 + LTR13 LTR ERVK 5 1007 0 3247 210 51 24 chr17 46532224 46532968 -42971585 + HERVK13 LTR ERVK 1 764 -7352 505 214 14 51 chr17 46533069 46533281 -42971272 + HERVK13 LTR ERVK 709 853 -7263 1647 219 65 67 chr17 46533509 46534061 -42970492 + HERVK13 LTR ERVK 933 1483 -6633 327 42 0 0 chr17 46534064 46534112 -42970441 - AluY SINE Alu 0 301 254 1029 77 0 65 chr17 46534112 46534267 -42970286 - AluY SINE Alu -166 145 1 10270 211 11 13 chr17 46534267 46536361 -42968192 + HERVK13 LTR ERVK 1472 3561 -4555 2164 78 0 3 chr17 46536465 46536749 -42967804 - AluSx SINE Alu -29 283 1 202 229 121 66 chr17 46536928 46537038 -42967515 - MIR SINE MIR -62 146 36 1148 152 0 30 chr17 46537307 46537505 -42967048 + AluJo SINE Alu 87 278 -34 286 261 120 0 chr17 46537505 46537597 -42966956 + MIR SINE MIR 51 153 -109 1657 162 50 3 chr17 46537600 46537897 -42966656 + AluJo SINE Alu 2 312 0 1767 151 21 0 chr17 46538084 46538388 -42966165 + AluSx SINE Alu 1 310 0 1591 101 121 12 chr17 46538586 46538878 -42965675 - AluSg SINE Alu 0 320 1 2230 82 13 0 chr17 46538953 46539257 -42965296 - AluY SINE Alu -3 308 1 653 267 17 17 chr17 46539624 46539800 -42964753 + MER5A DNA MER1_type 14 189 0 2398 72 3 0 chr17 46539960 46540267 -42964286 - AluSx SINE Alu -3 309 2 375 285 22 44 chr17 46540682 46540819 -42963734 - L2 LINE L2 -2 3270 3137 1612 96 5 5 chr17 46541449 46541668 -42962885 - MER41C-int LTR ERV1 -3144 4612 4394 * 11294 89 42 41 chr17 46541663 46542069 -42962484 - MER41C-int LTR ERV1 -4701 3055 2651 3027 167 46 42 chr17 46542069 46542681 -42961872 + LTR18B LTR ERVL 1 614 0 11294 89 42 41 chr17 46542681 46543038 -42961515 - MER41C-int LTR ERV1 -5105 2651 2296 2115 113 0 0 chr17 46543038 46543338 -42961215 - AluSx SINE Alu -12 300 1 11294 89 42 41 chr17 46543338 46544264 -42960289 - MER41C-int LTR ERV1 -5460 2296 1363 5763 91 88 25 chr17 46544256 46544453 -42960100 - MER41C-int LTR ERV1 -6826 930 747 * 1887 142 0 10 chr17 46544453 46544755 -42959798 - AluSx SINE Alu -13 299 1 5763 91 88 25 chr17 46544755 46545430 -42959123 - MER41C-int LTR ERV1 -7009 747 3 2694 163 112 2 chr17 46545494 46545992 -42958561 - MER41C LTR ERV1 -1 553 1 303 110 68 0 chr17 46547267 46547340 -42957213 + C-rich Low_complexity Low_complexity 4 81 0 180 0 0 0 chr17 46547459 46547479 -42957074 + (G)n Simple_repeat Simple_repeat 1 20 0 6287 212 9 9 chr17 46548357 46550115 -42954438 + HERVK13 LTR ERVK 6296 8116 0 7797 81 12 1 chr17 46550115 46551111 -42953442 + LTR13 LTR ERVK 1 1007 0 4245 201 98 38 chr17 46551128 46552171 -42952382 + HERVK13 LTR ERVK 720 1824 -6292 * 7238 197 7 5 chr17 46552165 46553309 -42951244 + HERVK13 LTR ERVK 6435 7583 -533 183 42 0 0 chr17 46553309 46553333 -42951220 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7238 197 7 5 chr17 46553333 46553539 -42951014 + HERVK13 LTR ERVK 7583 7787 -329 2214 71 0 0 chr17 46554169 46554450 -42950103 + AluY SINE Alu 24 304 -7 2243 111 0 0 chr17 46554731 46555038 -42949515 + AluSx SINE Alu 1 307 -5 259 209 209 0 chr17 46555061 46555152 -42949401 + MIR SINE MIR 34 143 -119 546 236 21 120 chr17 46555168 46555282 -42949271 + MER63A DNA MER1_type 1 82 -1606 960 112 0 8 chr17 46555282 46555416 -42949137 - FLAM_A SINE Alu 0 133 1 546 236 21 120 chr17 46555416 46555534 -42949019 + MER63A DNA MER1_type 82 210 0 1937 93 69 10 chr17 46555864 46556154 -42948399 + AluSq SINE Alu 1 307 -6 500 161 13 1 chr17 46556171 46556269 -42948284 + L1MD3 LINE L1 7895 8040 -2 2147 96 33 0 chr17 46556487 46556790 -42947763 - AluSq SINE Alu 0 313 1 201 324 181 0 chr17 46556856 46556961 -42947592 - MIR SINE MIR -116 146 23 1405 100 9 14 chr17 46557032 46557242 -42947311 + AluSc SINE Alu 82 290 -19 747 262 95 9 chr17 46557722 46557943 -42946610 - MIR SINE MIR -3 259 20 2181 88 10 0 chr17 46558054 46558349 -42946204 - AluSg SINE Alu -12 298 1 27 29 0 0 chr17 46558411 46558445 -42946108 + AT_rich Low_complexity Low_complexity 1 34 0 377 109 18 0 chr17 46558490 46558545 -42946008 + U7 snRNA snRNA 2 57 -6 1729 143 44 24 chr17 46558739 46559033 -42945520 - AluSq SINE Alu -13 300 1 284 282 70 0 chr17 46559289 46559360 -42945193 + L2 LINE L2 3195 3270 -43 207 288 15 0 chr17 46559563 46559629 -42944924 - MIR SINE MIR -118 144 78 410 267 68 56 chr17 46559630 46559896 -42944657 + L2 LINE L2 1333 1601 -1713 1892 123 0 3 chr17 46560009 46560294 -42944259 + AluJb SINE Alu 5 288 -24 328 343 10 0 chr17 46560346 46560448 -42944105 + MIR SINE MIR 159 261 -1 312 254 105 26 chr17 46561453 46561567 -42942986 + MIR SINE MIR 61 183 -79 2117 102 0 10 chr17 46561624 46561928 -42942625 + AluSx SINE Alu 1 301 -11 2141 105 0 0 chr17 46562086 46562380 -42942173 + AluSx SINE Alu 1 294 -18 2071 116 0 3 chr17 46563463 46563757 -42940796 + AluSq SINE Alu 1 293 -20 4516 69 0 47 chr17 46563757 46564128 -42940425 - LTR8 LTR ERV1 -80 611 281 1984 117 0 20 chr17 46564128 46564427 -42940126 - AluSx SINE Alu -19 293 1 4516 69 0 47 chr17 46564427 46564696 -42939857 - LTR8 LTR ERV1 -410 281 1 1660 152 4 7 chr17 46564853 46565130 -42939423 + AluSx SINE Alu 1 276 -36 207 0 0 0 chr17 46565721 46565744 -42938809 + (T)n Simple_repeat Simple_repeat 1 23 0 1850 94 3 56 chr17 46566123 46566314 -42938239 - AluSg SINE Alu 0 310 150 2033 129 0 0 chr17 46566314 46566617 -42937936 - AluSg SINE Alu -7 303 1 1850 94 3 56 chr17 46566617 46566741 -42937812 - AluSg SINE Alu -160 150 21 399 237 7 96 chr17 46567531 46567666 -42936887 + MIR SINE MIR 8 130 -132 928 167 0 0 chr17 46567679 46567823 -42936730 - Tigger7 DNA MER2_type -514 219 76 360 0 0 0 chr17 46568645 46568685 -42935868 + (TG)n Simple_repeat Simple_repeat 1 40 0 645 56 0 0 chr17 46568686 46568776 -42935777 + (GA)n Simple_repeat Simple_repeat 1 90 0 1623 153 21 14 chr17 46569520 46569823 -42934730 + AluJo SINE Alu 1 305 0 1860 116 27 17 chr17 46569830 46570123 -42934430 + AluSg SINE Alu 1 296 -14 226 310 0 14 chr17 46570124 46570195 -42934358 + MLT1L LTR MaLR 198 267 -348 272 275 14 0 chr17 46570383 46570452 -42934101 + MLT1L LTR MaLR 546 615 0 211 315 14 14 chr17 46570470 46570543 -42934010 + L2 LINE L2 2196 2268 -1046 2057 107 7 20 chr17 46570756 46571055 -42933498 - AluSc SINE Alu -14 295 1 626 290 116 69 chr17 46571143 46571608 -42932945 - MLT1L LTR MaLR -7 608 122 448 289 101 20 chr17 46571886 46572035 -42932518 + MER91A DNA MER1_type 36 196 0 1821 134 4 4 chr17 46572306 46572581 -42931972 - AluSx SINE Alu -32 280 6 367 284 52 45 chr17 46572853 46572987 -42931566 + MER5B DNA MER1_type 1 135 -43 2114 88 0 14 chr17 46573188 46573483 -42931070 - AluY SINE Alu -20 291 1 206 319 0 14 chr17 46573506 46573578 -42930975 - MIR SINE MIR -113 149 79 660 168 26 9 chr17 46573605 46573739 -42930814 + FLAM_A SINE Alu 1 136 0 304 327 20 30 chr17 46574133 46574234 -42930319 + MER5A DNA MER1_type 90 189 0 238 253 222 10 chr17 46574234 46574333 -42930220 - MER5A DNA MER1_type -14 175 56 212 149 0 43 chr17 46574391 46574438 -42930115 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 2398 56 0 7 chr17 46574464 46574770 -42929783 - AluY SINE Alu -7 304 1 2272 81 3 0 chr17 46575676 46575971 -42928582 + AluSc SINE Alu 1 296 -13 434 263 168 38 chr17 46575988 46576304 -42928249 + L1ME LINE L1 5463 5819 -302 1098 184 68 5 chr17 46576321 46576527 -42928026 + MER58A DNA MER1_type 1 219 -5 278 170 0 0 chr17 46576550 46576603 -42927950 + L1ME LINE L1 5830 5882 -239 1541 112 136 0 chr17 46576614 46576909 -42927644 + AluJb SINE Alu 1 329 0 1793 152 3 0 chr17 46576960 46577265 -42927288 + AluSx SINE Alu 1 306 0 1697 153 7 0 chr17 46577269 46577543 -42927010 + AluSx SINE Alu 5 280 -32 874 88 9 0 chr17 46579035 46579149 -42925404 + FLAM_C SINE Alu 11 125 -18 1596 188 0 22 chr17 46579162 46579481 -42925072 + AluJo SINE Alu 1 312 0 360 266 221 7 chr17 46579980 46580134 -42924419 + MIR SINE MIR 47 233 -29 1779 89 0 0 chr17 46580252 46580487 -42924066 + AluSq SINE Alu 2 236 -77 216 0 0 0 chr17 46580890 46580914 -42923639 + (A)n Simple_repeat Simple_repeat 1 24 0 2388 69 3 0 chr17 46581452 46581792 -42922761 - AluY SINE Alu 0 346 6 1906 112 3 11 chr17 46581885 46582170 -42922383 + AluSx SINE Alu 1 283 -29 685 204 0 14 chr17 46582191 46582333 -42922220 + FLAM_C SINE Alu 2 141 -2 302 130 0 11 chr17 46583451 46583505 -42921048 + Alu SINE Alu 2 41 -267 780 217 46 46 chr17 46583506 46583766 -42920787 - AluJo SINE Alu 0 302 43 2143 99 0 7 chr17 46583917 46584221 -42920332 - AluSx SINE Alu -10 302 1 302 342 72 0 chr17 46584261 46584372 -42920181 - L2 LINE L2 -38 3234 3116 1447 209 7 17 chr17 46584383 46584685 -42919868 - AluJb SINE Alu -13 299 1 599 429 35 58 chr17 46584921 46585231 -42919322 + AluSp SINE Alu 1 303 0 417 204 175 29 chr17 46585246 46585349 -42919204 + FLAM_C SINE Alu 2 119 -24 3415 89 4 8 chr17 46585350 46585823 -42918730 + L1PA10 LINE L1 5698 6168 0 183 188 146 0 chr17 46586366 46586414 -42918139 - L3 LINE CR1 -216 1361 1307 192 290 16 0 chr17 46586603 46586665 -42917888 - L3 LINE CR1 -324 1253 1191 749 125 8 33 chr17 46587517 46587637 -42916916 + FLAM_C SINE Alu 5 121 -12 946 253 0 11 chr17 46587673 46587934 -42916619 + AluJo SINE Alu 25 282 -30 1793 138 45 10 chr17 46588632 46588923 -42915630 - AluSx SINE Alu -11 301 1 348 0 58 0 chr17 46790423 46790475 -42714078 + (TA)n Simple_repeat Simple_repeat 2 56 0 1410 157 4 64 chr17 46790477 46790615 -42713938 - AluJb SINE Alu -39 273 159 2352 98 0 7 chr17 46790615 46790921 -42713632 - AluSg SINE Alu -6 304 1 1410 157 4 64 chr17 46790921 46791062 -42713491 - AluJb SINE Alu -153 159 11 757 157 0 0 chr17 46791090 46791205 -42713348 + FRAM SINE Alu 47 161 -15 1862 184 0 3 chr17 46791220 46791519 -42713034 + AluJo SINE Alu 1 298 -14 318 243 57 0 chr17 46791883 46791953 -42712600 - MIR3 SINE MIR -27 181 108 317 102 204 0 chr17 46792226 46792324 -42712229 + (CCCCAA)n Simple_repeat Simple_repeat 1 118 0 2321 123 0 0 chr17 46792715 46793025 -42711528 + AluSx SINE Alu 1 310 -2 539 229 20 139 chr17 46793112 46793357 -42711196 - MIR SINE MIR 0 262 47 228 35 0 0 chr17 46794216 46794245 -42710308 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2240 120 0 16 chr17 46794249 46794565 -42709988 - AluSx SINE Alu -1 311 1 409 234 84 9 chr17 46794638 46794745 -42709808 - MIR SINE MIR -61 147 33 234 0 0 0 chr17 46795190 46795216 -42709337 + (A)n Simple_repeat Simple_repeat 1 26 0 571 228 0 8 chr17 46795424 46796205 -42708348 + (TGG)n Simple_repeat Simple_repeat 1 774 0 262 139 0 0 chr17 46796305 46796348 -42708205 + Alu SINE Alu 236 278 -24 369 0 0 0 chr17 46796348 46796389 -42708164 + (TC)n Simple_repeat Simple_repeat 2 42 0 * 906 131 0 0 chr17 46796388 46796533 -42708020 + (TA)n Simple_repeat Simple_repeat 2 146 0 420 175 82 41 chr17 46796598 46796695 -42707858 + MER81 DNA DNA 10 110 -4 212 380 18 31 chr17 46796709 46796872 -42707681 - L2 LINE L2 -1781 1533 1373 1194 243 106 36 chr17 46796995 46797083 -42707470 - LTR16A LTR ERVL -5 445 365 1607 149 86 4 chr17 46797083 46797237 -42707316 - AluJo SINE Alu -21 291 151 315 0 0 0 chr17 46797237 46797272 -42707281 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1607 149 86 4 chr17 46797272 46797386 -42707167 - AluJo SINE Alu -161 151 1 1194 243 106 36 chr17 46797386 46797713 -42706840 - LTR16A LTR ERVL -85 365 1 2054 94 0 0 chr17 46797969 46798253 -42706300 + AluSx SINE Alu 34 312 0 1709 195 13 7 chr17 46798499 46798807 -42705746 - AluJo SINE Alu -2 310 1 2453 95 0 9 chr17 46798855 46799211 -42705342 - AluSq SINE Alu 0 353 1 2327 92 29 10 chr17 46799212 46799518 -42705035 - AluSx SINE Alu 0 312 1 189 288 125 25 chr17 46799575 46799655 -42704898 + MIR SINE MIR 60 147 -61 263 242 16 0 chr17 46800800 46800862 -42703691 - L2 LINE L2 -73 3240 3178 2341 116 7 0 chr17 46800946 46801256 -42703297 + AluSx SINE Alu 1 312 0 224 180 20 20 chr17 46801670 46801720 -42702833 + MIR SINE MIR 55 104 -104 1896 76 0 0 chr17 46801822 46802047 -42702506 - AluY SINE Alu -86 225 1 540 309 31 36 chr17 46802056 46802250 -42702303 - MIR SINE MIR -49 213 21 2285 113 0 7 chr17 46802306 46802616 -42701937 - AluSc SINE Alu -1 308 1 2419 211 46 28 chr17 46802776 46803311 -42701242 + L1MC4 LINE L1 7286 7835 -207 1468 195 29 55 chr17 46803311 46803465 -42701088 - MER58B DNA MER1_type -2080 340 184 2291 109 0 0 chr17 46803465 46803768 -42700785 - AluSx SINE Alu -9 303 1 1468 195 29 55 chr17 46803768 46803961 -42700592 - MER58B DNA MER1_type -2236 184 2 2419 211 46 28 chr17 46803961 46804028 -42700525 + L1MC4 LINE L1 7835 7899 -143 21 36 0 0 chr17 46804072 46804100 -42700453 + AT_rich Low_complexity Low_complexity 1 28 0 587 154 0 17 chr17 46804111 46804228 -42700325 + LTR9B LTR ERV1 445 559 -85 1728 176 31 7 chr17 46804598 46804888 -42699665 - AluJo SINE Alu -15 297 1 2072 131 7 13 chr17 46804893 46805198 -42699355 - AluSx SINE Alu -9 303 1 2199 121 0 3 chr17 46805563 46805861 -42698692 + AluSg SINE Alu 3 299 -11 394 246 49 41 chr17 46805900 46806022 -42698531 + L3 LINE CR1 363 485 -1092 2281 98 34 0 chr17 46806054 46806350 -42698203 + AluSx SINE Alu 1 306 -6 538 282 117 0 chr17 46806479 46806642 -42697911 + L3 LINE CR1 463 644 -933 733 193 0 0 chr17 46806658 46806772 -42697781 - FLAM_C SINE Alu -25 118 5 424 287 96 15 chr17 46806784 46806920 -42697633 + L3 LINE CR1 650 796 -781 1495 72 10 16 chr17 46806922 46807115 -42697438 + AluSx SINE Alu 1 192 -120 893 113 33 7 chr17 46807155 46807305 -42697248 + L1MB8 LINE L1 6025 6178 0 1831 168 0 0 chr17 46807343 46807611 -42696942 + AluJo SINE Alu 12 279 -33 232 314 33 46 chr17 46807961 46808114 -42696439 - L1ME LINE L1 -400 5762 5612 250 0 100 0 chr17 46808339 46808389 -42696164 + (TA)n Simple_repeat Simple_repeat 2 56 0 2236 102 11 0 chr17 46808389 46808674 -42695879 - AluSp SINE Alu -25 288 1 240 77 58 19 chr17 46808677 46808729 -42695824 - MER3 DNA MER1_type 0 2483 2430 * 327 220 10 30 chr17 46808705 46808805 -42695748 - MER3 DNA MER1_type -72 137 40 1783 109 56 0 chr17 46809891 46810157 -42694396 - AluSq SINE Alu -9 304 24 387 0 0 0 chr17 46810227 46810270 -42694283 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1789 170 0 3 chr17 46810272 46810554 -42693999 - AluJb SINE Alu -31 281 1 1514 197 0 46 chr17 46810556 46810881 -42693672 - AluJo SINE Alu -2 310 1 2350 84 3 7 chr17 46810881 46811178 -42693375 - AluSp SINE Alu -17 296 1 2334 127 0 0 chr17 46811196 46811503 -42693050 - AluSg SINE Alu 0 310 4 218 315 18 82 chr17 46811741 46811960 -42692593 + L2 LINE L2 2890 3094 -178 2118 97 7 0 chr17 46813285 46813554 -42690999 - AluSx SINE Alu -41 271 1 1695 144 6 95 chr17 46813791 46814117 -42690436 + AluJo SINE Alu 1 297 -15 252 143 245 0 chr17 46814207 46814256 -42690297 - MIR SINE MIR -64 144 84 182 294 82 12 chr17 46814303 46814388 -42690165 + L2 LINE L2 2993 3083 -189 2342 110 7 0 chr17 46814849 46815149 -42689404 + AluSx SINE Alu 1 302 -10 200 267 23 12 chr17 46815153 46815239 -42689314 + MIR SINE MIR 31 117 -91 232 129 113 0 chr17 46815814 46815876 -42688677 + (TTGGGG)n Simple_repeat Simple_repeat 1 69 0 1098 275 116 55 chr17 46815977 46816208 -42688345 + L1M4 LINE L1 2895 3111 -3035 1795 160 10 7 chr17 46816208 46816502 -42688051 + AluJb SINE Alu 1 295 -17 1098 275 116 55 chr17 46816502 46817021 -42687532 + L1M4 LINE L1 3111 3597 -2549 2176 100 3 29 chr17 46817021 46817331 -42687222 + AluSq SINE Alu 1 302 -11 1098 275 116 55 chr17 46817331 46817557 -42686996 + L1M4 LINE L1 3597 3808 -2338 1720 177 6 35 chr17 46817557 46817873 -42686680 + AluJo SINE Alu 6 312 0 1098 275 116 55 chr17 46817873 46818161 -42686392 + L1M4 LINE L1 3808 4238 -1908 2553 53 0 3 chr17 46818169 46818470 -42686083 + AluY SINE Alu 1 300 -11 383 287 246 0 chr17 46818633 46818800 -42685753 + MIR SINE MIR 54 261 -1 218 314 105 9 chr17 46818851 46818956 -42685597 - L2 LINE L2 0 3313 3199 2460 94 0 0 chr17 46819930 46820239 -42684314 + AluSx SINE Alu 1 309 -3 925 261 27 0 chr17 46820392 46820614 -42683939 + MIR SINE MIR 34 261 -1 381 257 26 0 chr17 46821130 46821243 -42683310 + L1M4 LINE L1 3830 3945 -2201 325 337 22 5 chr17 46821293 46821477 -42683076 + L1M4 LINE L1 4182 4368 -1778 1745 82 140 0 chr17 46821492 46821735 -42682818 + AluSx SINE Alu 5 281 -31 1979 98 28 73 chr17 46821943 46822270 -42682283 + AluSq SINE Alu 1 312 -1 409 232 232 17 chr17 46822356 46822537 -42682016 + L3 LINE CR1 809 1028 -549 4213 224 92 26 chr17 46822610 46823843 -42680710 + L2 LINE L2 1436 2749 -565 700 160 46 0 chr17 46823843 46823974 -42680579 - MER20 DNA MER1_type 0 219 83 569 290 77 22 chr17 46823992 46824272 -42680281 + L2 LINE L2 2766 3067 -246 319 284 0 0 chr17 46824244 46824318 -42680235 + L2 LINE L2 3225 3298 -15 * 3018 166 34 34 chr17 46824451 46825101 -42679452 - L1MB7 LINE L1 -54 6130 5481 200 227 0 0 chr17 46825515 46825559 -42678994 + (ATG)n Simple_repeat Simple_repeat 3 46 0 288 274 51 32 chr17 46825587 46825744 -42678809 + AluSq SINE Alu 124 283 -20 818 153 0 36 chr17 46825779 46825916 -42678637 + FLAM_C SINE Alu 2 133 0 22 0 0 0 chr17 46826020 46826042 -42678511 + AT_rich Low_complexity Low_complexity 1 22 0 446 194 234 0 chr17 46826320 46826444 -42678109 + MIR SINE MIR 103 255 -7 2272 82 40 10 chr17 46826679 46826983 -42677570 + AluSq SINE Alu 1 313 0 437 231 87 0 chr17 46828218 46828322 -42676231 + MIR SINE MIR 34 146 -62 353 299 94 8 chr17 46829001 46829128 -42675425 + MIR SINE MIR 71 208 -54 241 329 224 8 chr17 46829169 46829406 -42675147 - L2 LINE L2 0 3272 2985 188 304 72 0 chr17 46829427 46829496 -42675057 - L2 LINE L2 -1288 2026 1953 2338 88 0 31 chr17 46829906 46830226 -42674327 - AluY SINE Alu -1 310 1 2230 124 0 0 chr17 46830228 46830527 -42674026 - AluSg SINE Alu -11 299 1 427 199 219 73 chr17 46830572 46830604 -42673949 - L2 LINE L2 -1387 1927 1901 1914 173 0 3 chr17 46830604 46830904 -42673649 - AluJb SINE Alu -13 299 1 427 199 219 73 chr17 46830904 46831058 -42673495 - L2 LINE L2 -1413 1901 1694 2469 79 3 3 chr17 46831058 46831362 -42673191 - AluSp SINE Alu -9 304 1 427 199 219 73 chr17 46831362 46831420 -42673133 - L2 LINE L2 -1620 1694 1646 262 196 0 0 chr17 46831435 46831481 -42673072 + AluJb SINE Alu 1 46 -256 1097 139 187 24 chr17 46831584 46831793 -42672760 + AluJb SINE Alu 52 294 -18 1977 161 20 0 chr17 46832547 46832851 -42671702 - AluJb SINE Alu -2 310 1 1341 137 0 0 chr17 46832929 46833112 -42671441 - AluSg/x SINE Alu -16 294 112 1381 106 5 5 chr17 46833272 46833460 -42671093 - AluSx SINE Alu -124 188 1 1959 158 0 26 chr17 46834897 46835208 -42669345 + AluSx SINE Alu 9 311 -1 2163 117 3 10 chr17 46835211 46835518 -42669035 + AluSq SINE Alu 1 305 -8 268 284 57 0 chr17 46837155 46837243 -42667310 - L2 LINE L2 -40 3232 3140 2116 128 7 7 chr17 46838062 46838359 -42666194 + AluSx SINE Alu 3 299 -13 1354 216 41 22 chr17 46838808 46839170 -42665383 - L1MC4 LINE L1 -196 7846 7478 1971 204 161 46 chr17 46839191 46839280 -42665273 - L1MC4 LINE L1 -790 7252 7175 2128 133 0 13 chr17 46839280 46839596 -42664957 - AluSx SINE Alu 0 312 1 253 0 26 26 chr17 46839597 46839635 -42664918 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2142 112 0 0 chr17 46839635 46839922 -42664631 - AluSx SINE Alu -25 287 1 1971 204 161 46 chr17 46839922 46840231 -42664322 - L1MC4 LINE L1 -867 7175 6903 1607 191 0 23 chr17 46840231 46840535 -42664018 - AluJo SINE Alu -15 297 1 1971 204 161 46 chr17 46840535 46840564 -42663989 - L1MC4 LINE L1 -1139 6903 6879 2464 58 0 13 chr17 46840564 46840875 -42663678 - AluY SINE Alu -4 307 1 1971 204 161 46 chr17 46840875 46841161 -42663392 - L1MC4 LINE L1 -1163 6879 6451 974 167 60 0 chr17 46841724 46841892 -42662661 - AluJo SINE Alu -15 297 120 26 0 0 27 chr17 46841892 46841903 -42662650 + AT_rich Low_complexity Low_complexity 1 11 -25 2381 68 0 0 chr17 46841903 46842197 -42662356 - AluY SINE Alu -17 294 1 26 0 0 27 chr17 46842197 46842222 -42662331 + AT_rich Low_complexity Low_complexity 11 36 0 796 186 21 0 chr17 46842222 46842362 -42662191 - FLAM_C SINE Alu 0 143 1 207 229 76 108 chr17 46842362 46842519 -42662034 + MIR SINE MIR 49 200 -62 1808 186 0 10 chr17 46843101 46843412 -42661141 + AluJo SINE Alu 1 308 -4 2408 53 0 10 chr17 46843412 46843713 -42660840 + AluY SINE Alu 1 298 -13 430 206 11 92 chr17 46843716 46843796 -42660757 + HAL1 LINE L1 2230 2288 -219 1453 194 38 17 chr17 46843796 46844085 -42660468 + AluJb SINE Alu 1 295 -17 430 206 11 92 chr17 46844085 46844188 -42660365 + HAL1 LINE L1 2288 2398 -109 1258 220 0 3 chr17 46845830 46846277 -42658276 + G-rich Low_complexity Low_complexity 1 624 0 462 215 0 0 chr17 46846323 46846453 -42658100 + (CCA)n Simple_repeat Simple_repeat 2 131 0 572 219 6 0 chr17 46846480 46846649 -42657904 + (CCA)n Simple_repeat Simple_repeat 1 170 0 423 312 85 26 chr17 46846970 46847159 -42657394 - MIR SINE MIR -7 255 56 282 324 122 0 chr17 46847369 46847508 -42657045 + L2 LINE L2 3158 3313 0 432 55 0 0 chr17 46848528 46848583 -42655970 + (CA)n Simple_repeat Simple_repeat 1 55 0 781 164 8 15 chr17 46849480 46849614 -42654939 - FLAM_C SINE Alu 0 133 1 260 221 52 39 chr17 46849998 46850075 -42654478 + L2 LINE L2 3171 3248 -24 1017 189 17 0 chr17 46851497 46851672 -42652881 - MER45A DNA AcHobo 0 178 1 407 263 58 21 chr17 46852023 46852180 -42652373 + MIR3 SINE MIR 30 205 -3 2138 98 3 3 chr17 46853128 46853413 -42651140 + AluSc SINE Alu 1 285 -24 696 267 41 5 chr17 46853745 46853940 -42650613 + MIR SINE MIR 17 218 -44 481 311 23 106 chr17 46854042 46854268 -42650285 + L2 LINE L2 2520 2763 -509 2201 100 6 10 chr17 46854268 46854579 -42649974 - AluSx SINE Alu 0 312 3 481 311 23 106 chr17 46854579 46854965 -42649588 + L2 LINE L2 2763 3199 -73 257 75 25 0 chr17 46855058 46855098 -42649455 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 2028 69 76 7 chr17 46855215 46855490 -42649063 + AluY SINE Alu 1 294 -17 1871 130 10 20 chr17 46855497 46855790 -42648763 + AluSx SINE Alu 1 290 -22 342 278 72 10 chr17 46855792 46855889 -42648664 + L1MCa LINE L1 1974 2076 -4350 * 350 318 5 85 chr17 46855810 46855982 -42648571 - L1MCa LINE L1 -4353 2073 1916 1760 135 4 11 chr17 46855982 46856263 -42648290 - AluJo SINE Alu 0 312 34 350 318 5 85 chr17 46856263 46856279 -42648274 - L1MCa LINE L1 -4510 1916 1900 2393 71 0 3 chr17 46856306 46856614 -42647939 - AluY SINE Alu -3 308 2 2193 101 7 0 chr17 46856694 46856991 -42647562 - AluSq SINE Alu -14 299 1 1353 162 74 39 chr17 46857016 46857322 -42647231 + AluJb SINE Alu 1 312 0 326 271 187 0 chr17 46857506 46857613 -42646940 + L2 LINE L2 3187 3313 0 346 107 0 0 chr17 46857978 46858034 -42646519 - Alu SINE Alu -6 294 239 324 0 0 0 chr17 46858198 46858234 -42646319 + (GA)n Simple_repeat Simple_repeat 2 37 0 2070 128 3 13 chr17 46858680 46858993 -42645560 - AluSx SINE Alu -2 310 1 452 297 62 53 chr17 46859115 46859135 -42645418 - MIR SINE MIR -35 227 209 1624 131 42 8 chr17 46859135 46859395 -42645158 - AluSq SINE Alu -6 307 39 452 297 62 53 chr17 46859395 46859446 -42645107 - MIR SINE MIR -53 209 160 2093 92 30 26 chr17 46859446 46859751 -42644802 - AluSx SINE Alu -6 306 1 452 297 62 53 chr17 46859751 46859887 -42644666 - MIR SINE MIR -102 160 17 447 97 111 0 chr17 46861250 46861322 -42643231 - MADE1 DNA Mariner 0 80 1 457 353 69 0 chr17 46861329 46861519 -42643034 - MIR SINE MIR 0 262 56 2122 120 10 3 chr17 46861519 46861827 -42642726 - AluSq SINE Alu -3 310 1 457 353 69 0 chr17 46861827 46861840 -42642713 - MIR SINE MIR -206 56 45 822 280 134 9 chr17 46861843 46862433 -42642120 + L1PB1 LINE L1 5182 5829 -322 * 3126 214 43 13 chr17 46861978 46862766 -42641787 + L1ME1 LINE L1 5350 6161 -5 509 268 77 26 chr17 46863440 46863625 -42640928 - MIR SINE MIR -20 242 56 2084 136 7 0 chr17 46864415 46864725 -42639828 + AluSx SINE Alu 1 312 0 335 289 101 28 chr17 46864737 46864955 -42639598 + L2 LINE L2 2815 3048 -224 288 0 0 0 chr17 46865036 46865068 -42639485 + (TG)n Simple_repeat Simple_repeat 2 33 0 259 299 35 0 chr17 46865776 46865863 -42638690 - MIR SINE MIR -57 151 62 513 115 0 0 chr17 46866285 46866363 -42638190 + (TTCC)n Simple_repeat Simple_repeat 1 78 0 2190 138 0 0 chr17 46866363 46866675 -42637878 - AluSq SINE Alu -1 312 1 191 288 7 124 chr17 46867974 46868127 -42636426 + L3 LINE CR1 1305 1439 -138 415 288 101 0 chr17 46869185 46869324 -42635229 + MIR3 SINE MIR 45 197 -11 602 241 33 108 chr17 46869355 46869567 -42634986 + MIR SINE MIR 63 258 -4 475 281 46 49 chr17 46870254 46870457 -42634096 - MIR3 SINE MIR 0 208 6 218 191 0 0 chr17 46870460 46870502 -42634051 + (TCCA)n Simple_repeat Simple_repeat 2 43 0 1946 119 3 38 chr17 46870661 46870981 -42633572 - AluSx SINE Alu -3 309 1 218 217 33 0 chr17 46871044 46871104 -42633449 - L2 LINE L2 -217 3055 2994 180 152 0 0 chr17 46871795 46871828 -42632725 + (TG)n Simple_repeat Simple_repeat 1 33 0 318 320 39 33 chr17 46872369 46872522 -42632031 - MIR SINE MIR -54 208 55 760 204 56 0 chr17 46872524 46872686 -42631867 - AluJ SINE Alu -2 310 140 1945 110 4 14 chr17 46872692 46872973 -42631580 - AluSx SINE Alu -14 298 21 2135 78 64 0 chr17 46874546 46874828 -42629725 - AluSc SINE Alu -9 300 1 873 131 7 22 chr17 46874828 46874965 -42629588 - AluJ SINE Alu -177 135 1 660 232 76 5 chr17 46874967 46875152 -42629401 + MIR SINE MIR 63 260 -2 1973 159 3 0 chr17 46875171 46875479 -42629074 + AluJo SINE Alu 4 312 0 362 208 202 23 chr17 46875571 46875744 -42628809 - LTR1 LTR ERV1 0 785 582 303 296 6 135 chr17 46875916 46876227 -42628326 + L2 LINE L2 2929 3199 -73 257 75 25 0 chr17 46876320 46876360 -42628193 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 2145 110 0 0 chr17 46876411 46876713 -42627840 - AluSx SINE Alu 0 303 2 1791 134 51 10 chr17 46876719 46877011 -42627542 - AluJo SINE Alu -8 304 1 364 233 35 0 chr17 46877078 46877164 -42627389 + MIR SINE MIR 117 205 -57 213 179 12 131 chr17 46877195 46877236 -42627317 + MIR SINE MIR 185 213 -49 2089 100 3 10 chr17 46877236 46877535 -42627018 + AluY SINE Alu 1 297 -14 213 179 12 131 chr17 46877535 46877577 -42626976 + MIR SINE MIR 213 258 -4 2019 121 19 0 chr17 46878227 46878534 -42626019 + AluSq SINE Alu 1 313 0 311 281 0 21 chr17 46878767 46878863 -42625690 - MIR SINE MIR -1 261 168 1617 139 106 0 chr17 46878938 46879211 -42625342 - AluJo SINE Alu -10 302 1 955 267 40 8 chr17 46880090 46880337 -42624216 + MIR SINE MIR 5 259 -3 24 53 0 0 chr17 46881763 46881801 -42622752 + GC_rich Low_complexity Low_complexity 1 38 0 182 37 37 0 chr17 46881930 46881957 -42622596 + (CAGCG)n Simple_repeat Simple_repeat 4 31 0 25 65 0 0 chr17 46882051 46882097 -42622456 + GC_rich Low_complexity Low_complexity 1 46 0 31 0 0 0 chr17 46882235 46882266 -42622287 + GC_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr17 46882442 46882485 -42622068 + GC_rich Low_complexity Low_complexity 1 43 0 1997 151 0 19 chr17 46884732 46884868 -42619685 + AluSx SINE Alu 1 138 -174 2483 63 0 0 chr17 46884868 46885170 -42619383 + AluY SINE Alu 1 302 -9 1997 151 0 19 chr17 46885170 46885351 -42619202 + AluSx SINE Alu 138 312 0 2216 100 0 10 chr17 46886454 46886754 -42617799 + AluSx SINE Alu 1 297 -15 199 226 65 16 chr17 46886826 46886888 -42617665 + L2 LINE L2 3205 3269 -3 225 0 0 0 chr17 46888244 46888269 -42616284 + (TC)n Simple_repeat Simple_repeat 2 26 0 2753 10 0 0 chr17 46888269 46888575 -42615978 - AluYb8 SINE Alu -12 306 1 2065 105 7 3 chr17 46888575 46888860 -42615693 - AluSx SINE Alu -17 295 10 205 135 0 58 chr17 46889743 46889795 -42614758 + (TCCC)n Simple_repeat Simple_repeat 1 49 0 2341 69 0 0 chr17 46890719 46891010 -42613543 - AluSc SINE Alu -5 304 14 193 135 250 39 chr17 46891060 46891112 -42613441 + MIR SINE MIR 43 105 -103 1094 66 0 0 chr17 46891225 46891362 -42613191 + AluSc SINE Alu 161 297 -12 2111 93 7 0 chr17 46891371 46891650 -42612903 + AluSp SINE Alu 1 281 -32 315 0 0 0 chr17 46891652 46891687 -42612866 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1356 223 7 7 chr17 46891710 46892001 -42612552 + AluJo SINE Alu 1 291 -21 377 291 91 22 chr17 46892088 46892263 -42612290 - MIR SINE MIR -40 222 29 1513 183 50 27 chr17 46893368 46893668 -42610885 + AluJo SINE Alu 1 307 -5 2148 96 3 10 chr17 46893668 46893986 -42610567 + AluSc SINE Alu 1 309 0 341 354 95 0 chr17 46894481 46894628 -42609925 - MIR SINE MIR -67 195 35 352 312 70 13 chr17 46894999 46895233 -42609320 - MIR3 SINE MIR -2 260 4 32 43 0 0 chr17 46895403 46895449 -42609104 + GC_rich Low_complexity Low_complexity 1 46 0 25 95 0 0 chr17 46895657 46895731 -42608822 + GC_rich Low_complexity Low_complexity 1 74 0 339 372 71 46 chr17 46899688 46900083 -42604470 - L2 LINE L2 -10 3262 2858 477 0 0 0 chr17 46900611 46900664 -42603889 + (TG)n Simple_repeat Simple_repeat 1 53 0 180 0 0 0 chr17 46901334 46901354 -42603199 + (T)n Simple_repeat Simple_repeat 1 20 0 181 319 0 0 chr17 46902004 46902051 -42602502 + MIR3 SINE MIR 111 157 -51 1531 142 15 40 chr17 46902066 46902243 -42602310 - AluJo SINE Alu 0 312 132 2218 101 13 0 chr17 46902243 46902541 -42602012 - AluSx SINE Alu -8 304 3 2400 69 7 0 chr17 46902543 46902849 -42601704 - AluY SINE Alu -3 308 1 1531 142 15 40 chr17 46902849 46902942 -42601611 - AluJo SINE Alu -181 131 46 1679 158 58 0 chr17 46903385 46903663 -42600890 + AluJo SINE Alu 1 294 -18 398 190 8 99 chr17 46903906 46903992 -42600561 + MER58 DNA MER1_type 1 75 -2345 2329 82 3 3 chr17 46903992 46904295 -42600258 - AluSx SINE Alu -9 303 1 398 190 8 99 chr17 46904295 46904329 -42600224 + MER58 DNA MER1_type 75 110 -2310 2218 102 0 6 chr17 46904637 46904950 -42599603 - AluSq SINE Alu -2 311 1 693 229 224 50 chr17 46904973 46905331 -42599222 + L2 LINE L2 2894 3313 0 291 300 50 20 chr17 46905653 46905753 -42598800 + MIR3 SINE MIR 101 203 -5 785 100 53 135 chr17 46906567 46906737 -42597816 + AluSg/x SINE Alu 147 302 -10 399 322 168 9 chr17 46907608 46907822 -42596731 + MIR SINE MIR 11 258 -4 219 69 0 0 chr17 46908146 46908175 -42596378 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 182 162 27 0 chr17 46908615 46908652 -42595901 + MIR SINE MIR 109 146 -62 180 0 0 0 chr17 46912126 46912146 -42592407 + (CAG)n Simple_repeat Simple_repeat 2 21 0 197 288 15 15 chr17 46912358 46912424 -42592129 + MIR SINE MIR 80 145 -117 678 231 0 8 chr17 46913141 46913275 -42591278 + FLAM_A SINE Alu 1 133 0 298 361 114 6 chr17 46913866 46914032 -42590521 + MIR SINE MIR 55 238 -24 894 102 39 0 chr17 46914881 46915008 -42589545 + AluSx SINE Alu 5 136 -177 2101 118 0 0 chr17 46915008 46915288 -42589265 + AluSx SINE Alu 1 280 -32 240 35 0 0 chr17 46915290 46915319 -42589234 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 * 296 102 20 0 chr17 46915318 46915367 -42589186 + (GGAA)n Simple_repeat Simple_repeat 4 53 0 955 170 6 0 chr17 46915369 46915528 -42589025 + AluSx SINE Alu 119 278 -32 459 52 0 0 chr17 46915528 46915586 -42588967 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 625 244 26 14 chr17 46915586 46915795 -42588758 + MIR SINE MIR 40 255 -7 356 191 0 130 chr17 46917481 46917596 -42586957 - L2 LINE L2 0 3272 3173 21 36 0 0 chr17 46917944 46917972 -42586581 + GC_rich Low_complexity Low_complexity 1 28 0 2206 109 3 3 chr17 46918540 46918852 -42585701 - AluSx SINE Alu 0 312 1 585 245 145 32 chr17 46919274 46919468 -42585085 + MIR SINE MIR 5 219 -43 235 139 0 0 chr17 46919541 46919577 -42584976 + MIR SINE MIR 82 117 -91 363 284 7 7 chr17 46919969 46920110 -42584443 + CT-rich Low_complexity Low_complexity 1 141 0 195 42 0 0 chr17 46920796 46920820 -42583733 + (CA)n Simple_repeat Simple_repeat 1 24 0 238 344 110 26 chr17 46920868 46921022 -42583531 - MIR SINE MIR -50 212 46 979 155 31 0 chr17 46922281 46922442 -42582111 + AluJb SINE Alu 137 302 -10 225 304 0 0 chr17 46922444 46922500 -42582053 + L3b LINE CR1 1519 1574 -9 2023 138 10 10 chr17 46923688 46924000 -42580553 - AluJb SINE Alu 0 312 1 1829 168 13 7 chr17 46924237 46924541 -42580012 + AluJb SINE Alu 1 306 -6 1842 145 3 0 chr17 46924920 46925202 -42579351 - AluJb SINE Alu -13 299 17 349 287 59 0 chr17 46925331 46925432 -42579121 - L1ME4a LINE L1 -24 6097 5991 419 262 18 36 chr17 46925438 46925606 -42578947 - L1ME4a LINE L1 -178 5943 5779 1702 188 17 3 chr17 46925636 46925934 -42578619 - AluJo SINE Alu -3 309 8 225 262 0 0 chr17 46926703 46926764 -42577789 + MARNA DNA Mariner 250 310 -276 375 328 15 8 chr17 46926798 46926929 -42577624 + MIR SINE MIR 65 196 -66 2183 85 37 3 chr17 46928272 46928567 -42575986 - AluSx SINE Alu -1 311 7 242 269 85 69 chr17 46929766 46929896 -42574657 - L2 LINE L2 0 3272 3141 1851 157 0 0 chr17 46930196 46930503 -42574050 + AluSx SINE Alu 1 307 0 180 77 0 0 chr17 46931173 46931199 -42573354 + (TA)n Simple_repeat Simple_repeat 2 27 0 2406 48 10 3 chr17 46931599 46931892 -42572661 + AluY SINE Alu 1 295 -16 2258 117 0 0 chr17 46931929 46932237 -42572316 + AluSx SINE Alu 1 308 -4 250 293 61 12 chr17 46933560 46933642 -42570911 + MIR3 SINE MIR 95 180 -28 190 346 51 0 chr17 46935762 46935840 -42568713 + MIR SINE MIR 29 110 -152 681 282 65 32 chr17 46935845 46936078 -42568475 + MIR SINE MIR 2 241 -21 180 288 17 17 chr17 46939444 46939503 -42565050 - L2 LINE L2 0 3272 3214 2284 110 0 3 chr17 46939924 46940224 -42564329 - AluSx SINE Alu -13 299 1 335 312 84 13 chr17 46942148 46942302 -42562251 + L2 LINE L2 3090 3254 -18 396 0 0 0 chr17 46942989 46943033 -42561520 + (TC)n Simple_repeat Simple_repeat 2 45 0 243 0 0 0 chr17 46943032 46943059 -42561494 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 2539 83 0 13 chr17 46943061 46943375 -42561178 - AluSg SINE Alu 0 310 1 1377 176 24 4 chr17 46943375 46943630 -42560923 - Tigger2a DNA MER2_type -174 260 1 294 276 186 21 chr17 46943993 46944138 -42560415 - MIR3 SINE MIR -6 202 34 1810 174 3 3 chr17 46944514 46944807 -42559746 + AluJb SINE Alu 1 293 -19 210 340 62 10 chr17 46945522 46945619 -42558934 + MIR SINE MIR 34 135 -73 2265 116 3 3 chr17 46946515 46946825 -42557728 + AluSx SINE Alu 3 312 0 1729 176 0 14 chr17 46947000 46947284 -42557269 - AluJo SINE Alu -24 288 9 246 230 0 143 chr17 46947291 46947417 -42557136 + L1MC/D LINE L1 5701 5808 -2000 935 215 143 12 chr17 46947436 46947687 -42556866 + AluJb SINE Alu 3 286 -16 1197 188 5 14 chr17 46947860 46948078 -42556475 + AluJo SINE Alu 85 300 -12 1797 164 14 7 chr17 46948211 46948498 -42556055 + AluJb SINE Alu 1 289 -23 340 302 60 33 chr17 46949780 46949962 -42554591 + MIR3 SINE MIR 16 202 -6 447 332 55 27 chr17 46950789 46951009 -42553544 + MIR SINE MIR 37 262 0 1921 157 3 20 chr17 46951857 46952162 -42552391 - AluJb SINE Alu -6 306 7 2299 86 3 7 chr17 46952577 46952869 -42551684 - AluY SINE Alu -20 291 1 2034 113 41 17 chr17 46952869 46953162 -42551391 - AluSx SINE Alu -12 300 1 228 194 313 0 chr17 46953354 46953421 -42551132 + L2 LINE L2 3177 3264 -8 2076 148 7 3 chr17 46953422 46953725 -42550828 + AluJb SINE Alu 1 304 -8 195 42 0 0 chr17 46954583 46954607 -42549946 + (TG)n Simple_repeat Simple_repeat 2 25 0 204 97 0 0 chr17 46954659 46954690 -42549863 + (TG)n Simple_repeat Simple_repeat 2 32 0 656 151 63 16 chr17 46955442 46955568 -42548985 + FLAM_C SINE Alu 2 133 0 1238 220 65 0 chr17 46955578 46955823 -42548730 + AluJb SINE Alu 1 261 -51 1241 152 1 39 chr17 46955823 46956097 -42548456 + AluJo SINE Alu 70 305 -7 2329 128 0 0 chr17 46956099 46956411 -42548142 + AluSx SINE Alu 1 312 0 186 71 0 0 chr17 46957534 46957562 -42546991 + (T)n Simple_repeat Simple_repeat 1 28 0 360 180 85 12 chr17 46957576 46957765 -42546788 - AluJb SINE Alu -78 224 1 2209 110 7 3 chr17 46957775 46958074 -42546479 - AluSx SINE Alu -12 300 1 1142 113 0 25 chr17 46958166 46958325 -42546228 - AluJb SINE Alu -6 306 152 1804 142 0 11 chr17 46958490 46958751 -42545802 - AluSg SINE Alu -52 258 1 234 95 0 48 chr17 46958756 46958798 -42545755 - Alu SINE Alu -176 126 87 213 39 0 0 chr17 46958799 46958825 -42545728 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2123 103 13 35 chr17 46958828 46959139 -42545414 - AluSc SINE Alu -5 304 1 807 215 0 19 chr17 46959140 46959298 -42545255 - FRAM SINE Alu -21 155 1 1871 52 0 0 chr17 46961322 46961533 -42543020 + AluY SINE Alu 83 293 -18 263 116 0 23 chr17 46962137 46962180 -42542373 + LTR23 LTR ERV1 320 361 -76 2285 118 3 0 chr17 46962203 46962509 -42542044 + AluSp SINE Alu 1 307 -6 431 216 40 68 chr17 46964287 46964435 -42540118 - MIR SINE MIR -50 212 69 2266 106 3 3 chr17 46964637 46964940 -42539613 - AluSc SINE Alu -6 303 1 2122 110 11 3 chr17 46965348 46965630 -42538923 + AluSp SINE Alu 5 288 -25 321 380 37 6 chr17 46966459 46966622 -42537931 - L1 LINE L1 -1353 4793 4626 678 317 52 14 chr17 46966796 46967379 -42537174 - L1 LINE L1 -1636 4510 3906 375 23 0 0 chr17 46967380 46967424 -42537129 + (CA)n Simple_repeat Simple_repeat 1 44 0 2578 28 24 3 chr17 46967430 46967720 -42536833 - AluYb8 SINE Alu -22 296 1 2049 92 20 31 chr17 46967721 46968014 -42536539 - AluSg SINE Alu -16 294 5 1747 178 40 0 chr17 46968059 46968357 -42536196 - AluJb SINE Alu -2 310 1 2345 99 3 0 chr17 46968926 46969220 -42535333 - AluSg SINE Alu -15 295 1 1346 177 151 4 chr17 46969231 46969496 -42535057 - AluJb SINE Alu -8 304 1 2580 81 0 0 chr17 46969588 46969896 -42534657 - AluSq SINE Alu -5 308 1 461 314 65 16 chr17 46969897 46970082 -42534471 - MIR SINE MIR -62 200 7 473 254 150 42 chr17 46970715 46970767 -42533786 - MIR SINE MIR 0 262 217 1953 132 7 4 chr17 46970767 46971076 -42533477 - AluJb SINE Alu 0 310 1 473 254 150 42 chr17 46971076 46971215 -42533338 - MIR SINE MIR -45 217 49 225 309 96 11 chr17 46971604 46971698 -42532855 + MIR SINE MIR 91 192 -70 1904 96 111 4 chr17 46972466 46972746 -42531807 - AluSx SINE Alu -2 310 1 2270 116 0 7 chr17 46972931 46973234 -42531319 - AluSg SINE Alu -8 302 2 2155 100 10 17 chr17 46973337 46973636 -42530917 + AluSx SINE Alu 1 297 -15 302 271 187 0 chr17 46974000 46974107 -42530446 - L2 LINE L2 0 3313 3187 1432 162 74 39 chr17 46974291 46974597 -42529956 - AluJb SINE Alu 0 312 1 2303 101 7 0 chr17 46974624 46974921 -42529632 + AluSq SINE Alu 1 299 -14 2543 72 0 0 chr17 46975001 46975307 -42529246 + AluY SINE Alu 2 307 -4 1783 140 7 7 chr17 46975350 46975629 -42528924 + AluJo SINE Alu 34 312 0 305 289 72 10 chr17 46975723 46975820 -42528733 - L1MCa LINE L1 -4350 2076 1974 1918 127 17 21 chr17 46975822 46976113 -42528440 - AluSx SINE Alu -22 290 1 2149 69 76 7 chr17 46976120 46976395 -42528158 - AluY SINE Alu -17 294 1 1731 138 43 3 chr17 46976456 46976738 -42527815 + AluSx SINE Alu 1 293 -19 2232 125 6 3 chr17 46976740 46977051 -42527502 + AluSx SINE Alu 1 312 0 274 211 84 28 chr17 46977057 46977128 -42527425 - L1ME3A LINE L1 -44 6126 6052 2349 173 36 126 chr17 46977133 46977501 -42527052 - LTR8 LTR ERV1 -3 688 289 1678 165 3 30 chr17 46977501 46977798 -42526755 - AluJb SINE Alu -17 295 7 2349 173 36 126 chr17 46977798 46977870 -42526683 - LTR8 LTR ERV1 -402 289 212 2634 47 0 0 chr17 46977870 46978168 -42526385 - AluY SINE Alu -13 298 1 2349 173 36 126 chr17 46978168 46978223 -42526330 - LTR8 LTR ERV1 -479 212 154 2399 76 3 7 chr17 46978223 46978524 -42526029 - AluSp SINE Alu -13 300 1 2349 173 36 126 chr17 46978524 46978749 -42525804 - LTR8 LTR ERV1 -537 154 31 996 139 72 0 chr17 46978769 46978935 -42525618 - AluSg/x SINE Alu -6 306 129 225 0 0 0 chr17 46978938 46978963 -42525590 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 2253 99 3 7 chr17 46978968 46979262 -42525291 - AluSx SINE Alu -19 293 1 303 89 0 0 chr17 46979264 46979309 -42525244 - LTR8A LTR ERV1 -682 45 1 288 139 63 25 chr17 46979309 46979388 -42525165 - L1ME3A LINE L1 -119 6051 5970 1963 125 104 0 chr17 46979395 46979675 -42524878 - AluSx SINE Alu -3 309 1 1927 90 102 4 chr17 46979689 46979955 -42524598 - AluSx SINE Alu -20 292 1 1407 106 16 0 chr17 46979967 46980155 -42524398 - AluSg/x SINE Alu -17 293 103 265 61 0 0 chr17 46980155 46980188 -42524365 - Alu SINE Alu -270 38 6 2236 97 20 7 chr17 46980195 46980493 -42524060 - AluSq SINE Alu -11 302 1 938 203 185 9 chr17 46980494 46980538 -42524015 - L1ME3A LINE L1 -193 5977 5942 1798 161 0 71 chr17 46980538 46980874 -42523679 - AluJb SINE Alu 0 312 1 938 203 185 9 chr17 46980874 46981159 -42523394 - L1ME3A LINE L1 -228 5942 5590 1965 154 74 29 chr17 46981159 46981318 -42523235 - MER39 LTR ERV1 0 707 557 2111 94 0 11 chr17 46981318 46981593 -42522960 + AluSg SINE Alu 1 272 -38 180 0 0 0 chr17 46981597 46981617 -42522936 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 279 0 0 0 chr17 46981616 46981647 -42522906 + (CA)n Simple_repeat Simple_repeat 1 31 0 1965 154 74 29 chr17 46981617 46982103 -42522450 - MER39 LTR ERV1 -152 555 21 487 152 0 33 chr17 46982103 46982195 -42522358 - AluJ/FRAM SINE Alu -8 304 216 2149 122 3 0 chr17 46982280 46982575 -42521978 + AluSx SINE Alu 2 297 -15 2292 66 0 4 chr17 46982583 46982857 -42521696 + AluSc SINE Alu 1 273 -36 180 0 0 0 chr17 46982862 46982882 -42521671 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2134 119 7 7 chr17 46983025 46983328 -42521225 - AluJb SINE Alu -5 307 5 299 232 232 8 chr17 46983504 46983629 -42520924 - Charlie8 DNA MER1_type -2226 191 39 215 304 45 18 chr17 46983707 46983819 -42520734 + MIR SINE MIR 83 197 -65 33 43 0 0 chr17 46984514 46984561 -42519992 + GC_rich Low_complexity Low_complexity 1 47 0 248 118 0 20 chr17 46984599 46984650 -42519903 + (CGG)n Simple_repeat Simple_repeat 3 52 0 210 318 15 0 chr17 46984663 46984729 -42519824 + G-rich Low_complexity Low_complexity 2 68 0 409 119 0 0 chr17 46986978 46987045 -42517508 - AluY SINE Alu 0 310 244 1359 80 0 17 chr17 46987045 46987221 -42517332 - AluY SINE Alu -138 173 1 562 126 204 0 chr17 46987225 46987328 -42517225 - FRAM SINE Alu -18 158 35 183 42 0 0 chr17 46987353 46987377 -42517176 + (TCCTG)n Simple_repeat Simple_repeat 2 25 0 2094 96 3 75 chr17 46987511 46987844 -42516709 - AluSq SINE Alu -4 309 1 34 42 0 0 chr17 46988042 46988090 -42516463 + AT_rich Low_complexity Low_complexity 1 48 0 2321 96 7 0 chr17 46988320 46988621 -42515932 - AluY SINE Alu -8 303 1 2232 116 0 3 chr17 46988650 46988951 -42515602 + AluSx SINE Alu 1 300 -12 2164 119 27 0 chr17 46989077 46989371 -42515182 - AluSx SINE Alu -10 302 1 2107 89 50 0 chr17 46989372 46989654 -42514899 - AluSp SINE Alu -17 296 1 1335 136 144 38 chr17 46989655 46989919 -42514634 - AluJo SINE Alu 0 312 21 1216 118 12 6 chr17 46990044 46990214 -42514339 - AluSg/x SINE Alu -11 301 131 244 180 0 0 chr17 46990225 46990275 -42514278 - Alu SINE Alu -1 300 251 1550 183 10 28 chr17 46990275 46990564 -42513989 + AluJo SINE Alu 5 288 -24 2290 82 7 3 chr17 46990566 46990857 -42513696 + AluSg SINE Alu 1 292 -18 2214 126 0 3 chr17 46990860 46991169 -42513384 + AluY SINE Alu 1 308 -3 783 182 15 0 chr17 46991170 46991302 -42513251 + AluJo SINE Alu 2 135 -177 2413 101 0 0 chr17 46991322 46991630 -42512923 + AluSc SINE Alu 1 308 -1 370 332 119 24 chr17 46991933 46992228 -42512325 + L2 LINE L2 2160 2482 -832 2191 86 0 4 chr17 46992346 46992615 -42511938 - AluSq SINE Alu -41 272 5 299 230 40 0 chr17 46992627 46992701 -42511852 - L1MB8 LINE L1 -115 6063 5987 2613 74 0 0 chr17 46992752 46993063 -42511490 - AluY SINE Alu 0 311 1 514 225 62 0 chr17 46993096 46993225 -42511328 - L1MB8 LINE L1 -460 5661 5525 2518 74 7 3 chr17 46993253 46993563 -42510990 - AluSp SINE Alu -2 311 1 211 301 211 26 chr17 46994528 46994684 -42509869 - MIR3 SINE MIR -11 197 13 1042 93 0 14 chr17 46994719 46994858 -42509695 + AluSx SINE Alu 3 139 -174 392 161 65 0 chr17 46994858 46994951 -42509602 + L1MB3 LINE L1 5565 5663 -505 1169 143 0 0 chr17 46994953 46995114 -42509439 + AluSx SINE Alu 133 293 -19 2408 133 68 45 chr17 46995121 46995272 -42509281 + L1MB3 LINE L1 5683 5829 -354 2474 53 0 0 chr17 46995272 46995602 -42508951 - AluY SINE Alu 0 330 1 2408 133 68 45 chr17 46995602 46995938 -42508615 + L1MB3 LINE L1 5829 6182 -1 819 154 0 22 chr17 46996017 46996153 -42508400 - FLAM_C SINE Alu 0 133 1 1961 93 40 25 chr17 46996177 46996455 -42508098 - AluSq SINE Alu -31 282 1 2490 90 0 0 chr17 46996738 46997048 -42507505 - AluSq SINE Alu -3 310 1 387 268 10 41 chr17 46997141 46997238 -42507315 + MIR SINE MIR 7 100 -162 2386 92 3 10 chr17 46997245 46997550 -42507003 - AluSp SINE Alu -10 303 1 426 260 12 98 chr17 46997642 46997746 -42506807 + MIR SINE MIR 7 92 -170 2261 92 16 10 chr17 46997746 46998049 -42506504 - AluSp SINE Alu -7 306 2 426 260 12 98 chr17 46998049 46998117 -42506436 + MIR SINE MIR 92 164 -98 2121 122 3 13 chr17 46998174 46998486 -42506067 + AluSx SINE Alu 1 309 -3 2683 46 0 0 chr17 46998840 46999143 -42505410 - AluY SINE Alu -4 307 5 383 363 148 29 chr17 46999288 46999632 -42504921 + L1MC/D LINE L1 5313 5697 -2111 901 143 15 0 chr17 46999663 46999796 -42504757 + AluSg/x SINE Alu 163 297 -13 2211 104 7 0 chr17 47000020 47000317 -42504236 - AluSx SINE Alu -13 299 1 280 200 120 0 chr17 47000364 47000439 -42504114 - L1MEc LINE L1 -5941 455 372 2379 91 0 0 chr17 47000539 47000835 -42503718 + AluY SINE Alu 1 296 -15 2366 107 0 3 chr17 47001186 47001494 -42503059 + AluSx SINE Alu 1 307 -5 1809 133 56 3 chr17 47001622 47001907 -42502646 + AluSx SINE Alu 1 300 -12 2255 88 7 7 chr17 47002032 47002327 -42502226 + AluSc SINE Alu 1 295 -14 978 54 69 0 chr17 47002476 47002606 -42501947 + MER85 DNA T2_type 1 139 0 1988 106 3 44 chr17 47002624 47002946 -42501607 - AluSc SINE Alu 0 310 1 2200 109 26 0 chr17 47002952 47003256 -42501297 - AluSx SINE Alu 0 312 1 1990 164 10 3 chr17 47003292 47003597 -42500956 + AluJb SINE Alu 1 307 -5 2384 85 3 16 chr17 47003597 47003903 -42500650 + AluSq SINE Alu 1 302 -11 1600 184 35 17 chr17 47003910 47004198 -42500355 + AluJb SINE Alu 1 293 -19 1153 53 0 8 chr17 47004682 47004815 -42499738 + AluSq/x SINE Alu 1 132 -180 2154 95 7 14 chr17 47004817 47005112 -42499441 + AluY SINE Alu 1 293 -18 2469 68 14 0 chr17 47005112 47005407 -42499146 + AluSp SINE Alu 1 299 -14 848 221 0 0 chr17 47005711 47005865 -42498688 - AluJo/FRAM SINE Alu -23 289 136 2059 121 19 25 chr17 47005868 47006183 -42498370 - AluSp SINE Alu 0 313 1 1644 133 44 58 chr17 47006204 47006498 -42498055 - AluJb SINE Alu -10 302 13 306 0 0 0 chr17 47006516 47006550 -42498003 + (TG)n Simple_repeat Simple_repeat 2 35 0 225 186 0 0 chr17 47006552 47006595 -42497958 - AluJo SINE Alu -20 282 240 368 185 0 0 chr17 47006602 47006667 -42497886 - AluJo SINE Alu -151 151 87 2206 97 43 0 chr17 47008290 47008589 -42495964 + AluSx SINE Alu 1 312 0 1501 123 5 0 chr17 47008783 47008987 -42495566 - AluSx SINE Alu -107 205 1 1913 154 0 27 chr17 47011967 47012266 -42492287 - AluJb SINE Alu -21 291 1 21 36 0 0 chr17 47012313 47012341 -42492212 + AT_rich Low_complexity Low_complexity 1 28 0 2253 107 7 10 chr17 47013074 47013383 -42491170 + AluSq SINE Alu 1 308 -5 2167 94 3 39 chr17 47013676 47013985 -42490568 - AluSg SINE Alu -12 298 1 2197 78 35 3 chr17 47014571 47014854 -42489699 + AluSq SINE Alu 1 292 -21 1694 171 28 3 chr17 47015056 47015342 -42489211 - AluJo SINE Alu -19 293 1 2131 128 7 0 chr17 47015473 47015770 -42488783 + AluSx SINE Alu 1 299 -13 1934 119 42 18 chr17 47015815 47016100 -42488453 + AluSx SINE Alu 1 292 -20 2053 88 0 4 chr17 47017616 47017877 -42486676 + AluY SINE Alu 44 303 -8 1168 137 15 54 chr17 47017913 47018118 -42486435 + AluJb SINE Alu 85 281 -31 285 29 0 0 chr17 47018140 47018174 -42486379 + (TG)n Simple_repeat Simple_repeat 2 35 0 245 239 223 8 chr17 47018242 47018372 -42486181 - L1ME1 LINE L1 -2 6164 6007 3081 114 95 44 chr17 47018721 47019425 -42485128 + LTR1 LTR ERV1 1 785 0 2149 109 0 23 chr17 47019446 47019750 -42484803 + AluSg SINE Alu 1 297 -13 967 178 70 43 chr17 47020827 47021057 -42483496 - Tigger3(Golem) DNA MER2_type -47 2982 2747 1981 133 0 26 chr17 47021067 47021343 -42483210 + AluJb SINE Alu 1 270 -42 2464 82 3 0 chr17 47021343 47021648 -42482905 - AluSp SINE Alu -6 307 2 1981 133 0 26 chr17 47021648 47021673 -42482880 + AluJb SINE Alu 270 294 -18 619 142 108 0 chr17 47021677 47021797 -42482756 + FLAM_C SINE Alu 1 133 0 1835 173 0 7 chr17 47022241 47022564 -42481989 - AluJo SINE Alu 0 321 1 332 252 72 45 chr17 47022635 47022746 -42481807 - L1ME4a LINE L1 -1 6120 6007 711 200 0 8 chr17 47022792 47022912 -42481641 + FLAM_C SINE Alu 2 120 -23 2356 81 0 32 chr17 47022932 47023240 -42481313 + AluY SINE Alu 1 298 -13 2057 146 7 0 chr17 47023244 47023538 -42481015 + AluSx SINE Alu 1 296 -16 2603 50 0 3 chr17 47023540 47023841 -42480712 + AluY SINE Alu 1 300 -11 1919 163 3 7 chr17 47023843 47024150 -42480403 + AluJb SINE Alu 1 306 -6 1691 167 4 4 chr17 47024278 47024542 -42480011 - AluJo SINE Alu -48 264 1 2226 121 10 0 chr17 47024579 47024885 -42479668 - AluSg SINE Alu -1 309 1 1476 129 33 132 chr17 47025009 47025151 -42479402 + AluJo SINE Alu 2 156 -146 2030 113 76 0 chr17 47025151 47025426 -42479127 + AluSx SINE Alu 1 296 -16 2322 105 10 0 chr17 47025428 47025733 -42478820 + AluSp SINE Alu 1 308 -5 2097 108 7 11 chr17 47025737 47026075 -42478478 + AluSx SINE Alu 1 337 0 1476 129 33 132 chr17 47026075 47026235 -42478318 + AluJo SINE Alu 160 282 -20 222 37 0 0 chr17 47026235 47026262 -42478291 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1476 129 33 132 chr17 47026262 47026281 -42478272 + AluJo SINE Alu 282 301 -1 353 355 46 50 chr17 47026366 47026648 -42477905 - L2 LINE L2 -5 3267 2987 1731 171 34 7 chr17 47026664 47026962 -42477591 + AluJb SINE Alu 1 306 -6 2099 133 0 0 chr17 47028474 47028767 -42475786 - AluSx SINE Alu -19 293 1 2263 107 3 7 chr17 47029326 47029635 -42474918 - AluSg SINE Alu -2 308 1 421 212 9 9 chr17 47029845 47029958 -42474595 + Charlie5 DNA MER1_type 2393 2505 -107 2008 100 28 24 chr17 47029973 47030264 -42474289 - AluSg SINE Alu -18 292 1 971 189 53 127 chr17 47030293 47030615 -42473938 + AluJo SINE Alu 2 299 -3 183 156 0 0 chr17 47030672 47030704 -42473849 + T-rich Low_complexity Low_complexity 1 32 0 1069 172 0 69 chr17 47030720 47030777 -42473776 - AluJo SINE Alu -122 190 131 2387 81 3 3 chr17 47030777 47031073 -42473480 - AluSg SINE Alu -14 296 1 1069 172 0 69 chr17 47031073 47031219 -42473334 - AluJo SINE Alu -181 131 1 2272 105 7 0 chr17 47031601 47031896 -42472657 - AluSx SINE Alu -15 297 1 264 326 137 11 chr17 47032069 47032259 -42472294 + L3b LINE CR1 1156 1369 -214 283 221 256 12 chr17 47035941 47036027 -42468526 + MIR3 SINE MIR 52 158 -50 388 275 84 30 chr17 47036066 47036233 -42468320 - Charlie8 DNA MER1_type -2136 281 106 2307 91 10 0 chr17 47036261 47036569 -42467984 - AluSx SINE Alu -1 311 1 2215 117 16 0 chr17 47040857 47041165 -42463388 - AluSq SINE Alu 0 313 1 308 222 30 111 chr17 47043518 47043653 -42460900 + MIR3 SINE MIR 33 156 -52 1080 117 12 35 chr17 47043663 47043834 -42460719 - AluSg/x SINE Alu -12 298 132 1963 93 11 7 chr17 47043834 47044123 -42460430 - AluSq SINE Alu 0 313 22 341 225 12 0 chr17 47044190 47044270 -42460283 - MIR SINE MIR 0 262 182 782 273 51 14 chr17 47046311 47046527 -42458026 - MIR SINE MIR -8 254 31 198 300 32 24 chr17 47046883 47046986 -42457567 + MIR SINE MIR 56 161 -47 2117 116 10 7 chr17 47047598 47047901 -42456652 - AluSg1 SINE Alu -4 305 2 23 0 0 0 chr17 47047909 47047932 -42456621 + AT_rich Low_complexity Low_complexity 1 23 0 852 153 0 0 chr17 47047932 47048056 -42456497 - FLAM_C SINE Alu -9 124 1 232 256 84 77 chr17 47048247 47048415 -42456138 - MIR SINE MIR -57 205 25 254 350 0 20 chr17 47048597 47048697 -42455856 + MER5A DNA MER1_type 63 160 -29 254 304 59 29 chr17 47049000 47049064 -42455489 + MIR SINE MIR 87 157 -105 2013 113 26 22 chr17 47049064 47049375 -42455178 + AluSx SINE Alu 1 312 0 254 304 59 29 chr17 47049375 47049412 -42455141 + MIR SINE MIR 157 191 -71 182 125 0 25 chr17 47049744 47049784 -42454769 + (CCCA)n Simple_repeat Simple_repeat 1 39 0 510 349 42 0 chr17 47050162 47050354 -42454199 - MIR SINE MIR -34 228 29 397 286 119 24 chr17 47050917 47050962 -42453591 - MER91A DNA MER1_type -12 184 145 2303 113 0 0 chr17 47050962 47051271 -42453282 + AluSx SINE Alu 1 309 -3 397 286 119 24 chr17 47051271 47051393 -42453160 - MER91A DNA MER1_type -51 145 1 515 250 94 39 chr17 47051576 47051804 -42452749 + MIR SINE MIR 13 259 -3 1565 159 0 19 chr17 47051815 47052086 -42452467 - AluJo SINE Alu -2 310 45 330 256 12 12 chr17 47052255 47052337 -42452216 - MIR SINE MIR -102 160 79 509 222 50 78 chr17 47052750 47052856 -42451697 + MIR SINE MIR 59 159 -103 2211 98 0 3 chr17 47052856 47053161 -42451392 + AluSp SINE Alu 2 305 -8 509 222 50 78 chr17 47053161 47053234 -42451319 + MIR SINE MIR 159 233 -29 29 47 0 0 chr17 47055667 47055710 -42448843 + GC_rich Low_complexity Low_complexity 1 43 0 339 233 58 0 chr17 47055801 47055941 -42448612 + G-rich Low_complexity Low_complexity 1 148 0 39 38 0 0 chr17 47056038 47056091 -42448462 + GC_rich Low_complexity Low_complexity 1 53 0 474 247 26 21 chr17 47057394 47057566 -42446987 - MIR SINE MIR -60 148 15 2357 55 3 29 chr17 47058023 47058333 -42446220 - AluY SINE Alu -9 302 1 1581 132 31 116 chr17 47058344 47058671 -42445882 - AluSx SINE Alu -3 299 1 2240 61 3 55 chr17 47058682 47059010 -42445543 - AluY SINE Alu 0 311 1 1982 76 57 4 chr17 47059010 47059274 -42445279 - AluSp SINE Alu -35 278 1 2085 116 0 3 chr17 47059276 47059568 -42444985 - AluSx SINE Alu -1 311 21 1365 150 55 15 chr17 47059576 47059733 -42444820 - AluJb SINE Alu -13 299 150 2270 95 0 10 chr17 47059733 47060038 -42444515 - AluSx SINE Alu -9 303 2 1365 150 55 15 chr17 47060038 47060118 -42444435 - AluJb SINE Alu -162 150 47 1759 64 0 0 chr17 47060118 47060336 -42444217 + AluY SINE Alu 1 218 -93 1365 150 55 15 chr17 47060336 47060370 -42444183 - AluJb SINE Alu -265 47 16 747 157 0 45 chr17 47060391 47060525 -42444028 - FLAM_C SINE Alu -5 128 1 600 304 46 29 chr17 47061231 47061471 -42443082 + MIR SINE MIR 2 245 -17 255 350 58 0 chr17 47062143 47062246 -42442307 - MIR SINE MIR -13 249 141 2196 73 14 10 chr17 47062246 47062558 -42441995 - AluSx SINE Alu 0 312 1 442 271 38 15 chr17 47062718 47062851 -42441702 - MIR3 SINE MIR -9 199 64 276 100 0 0 chr17 47065690 47065730 -42438823 + (CTGGGG)n Simple_repeat Simple_repeat 2 41 0 2180 107 7 0 chr17 47068138 47068437 -42436116 - AluSx SINE Alu -6 306 6 2104 104 0 73 chr17 47068725 47069053 -42435500 - AluSx SINE Alu -8 304 1 210 309 134 0 chr17 47069056 47069153 -42435400 + L2 LINE L2 2253 2362 -952 431 271 35 108 chr17 47069156 47069265 -42435288 + L1M4 LINE L1 5083 5198 -948 2219 125 46 25 chr17 47069265 47069632 -42434921 + THE1C LTR MaLR 1 375 0 431 271 35 108 chr17 47069632 47069748 -42434805 + L1M4 LINE L1 5198 5289 -857 1593 141 0 0 chr17 47069748 47069975 -42434578 + AluJb SINE Alu 2 228 -84 431 271 35 108 chr17 47069975 47070006 -42434547 + L1M4 LINE L1 5289 5321 -825 882 287 99 37 chr17 47070013 47070549 -42434004 + L1MC/D LINE L1 5254 5822 -1986 1764 182 3 0 chr17 47070552 47070849 -42433704 - AluSx SINE Alu -14 298 1 22 0 0 0 chr17 47070851 47070873 -42433680 + AT_rich Low_complexity Low_complexity 1 22 0 688 86 0 11 chr17 47070898 47070991 -42433562 - FLAM_C SINE Alu -34 109 18 2047 119 7 3 chr17 47071071 47071374 -42433179 + AluSg SINE Alu 1 304 -6 42 65 0 0 chr17 47071576 47071653 -42432900 + AT_rich Low_complexity Low_complexity 1 77 0 388 293 11 85 chr17 47072288 47072402 -42432151 - MER5A DNA MER1_type -9 180 84 1569 159 0 80 chr17 47072402 47072547 -42432006 - AluJo SINE Alu -34 278 168 2117 109 3 26 chr17 47072547 47072858 -42431695 - AluSx SINE Alu -8 304 1 1569 159 0 80 chr17 47072858 47073014 -42431539 - AluJo SINE Alu -144 168 1 388 293 11 85 chr17 47073014 47073087 -42431466 - MER5A DNA MER1_type -105 84 7 2499 44 7 0 chr17 47073829 47074125 -42430428 - AluY SINE Alu -13 298 1 390 314 45 19 chr17 47074144 47074329 -42430224 - MIR3 SINE MIR -33 175 6 1924 129 31 0 chr17 47074917 47075203 -42429350 + AluSx SINE Alu 1 295 -17 24 32 0 0 chr17 47075698 47075729 -42428824 + AT_rich Low_complexity Low_complexity 1 31 0 407 313 26 20 chr17 47075861 47076054 -42428499 + MIR3 SINE MIR 5 195 -60 194 270 40 27 chr17 47078393 47078467 -42426086 + MIR SINE MIR 3 77 -185 323 284 18 107 chr17 47078631 47078695 -42425858 + L1MC4a LINE L1 6944 7012 -796 1880 164 0 6 chr17 47078695 47079007 -42425546 + AluJo SINE Alu 1 310 -2 323 284 18 107 chr17 47079007 47079111 -42425442 + L1MC4a LINE L1 7012 7097 -711 2106 105 17 0 chr17 47079293 47079588 -42424965 - AluSx SINE Alu -12 300 1 1995 123 20 0 chr17 47079864 47080157 -42424396 - AluSx SINE Alu -13 299 1 428 203 220 8 chr17 47081664 47081782 -42422771 + MIR SINE MIR 83 225 -37 2688 37 0 0 chr17 47081797 47082095 -42422458 - AluY SINE Alu -13 298 1 2398 88 0 0 chr17 47082098 47082393 -42422160 - AluSg SINE Alu -15 295 1 2121 129 24 0 chr17 47083356 47083651 -42420902 - AluSx SINE Alu -10 302 1 234 301 57 49 chr17 47083757 47083880 -42420673 + MIR SINE MIR 61 184 -78 321 26 0 0 chr17 47085251 47085289 -42419264 + (TG)n Simple_repeat Simple_repeat 2 39 0 1594 176 50 46 chr17 47085461 47085763 -42418790 + AluJo SINE Alu 1 303 -9 260 157 0 0 chr17 47085763 47085814 -42418739 + L1MB3 LINE L1 6133 6183 0 2241 125 3 0 chr17 47085844 47086149 -42418404 - AluSx SINE Alu -3 309 4 2153 95 0 0 chr17 47086166 47086430 -42418123 - AluSc SINE Alu -45 264 1 778 242 142 60 chr17 47086521 47086949 -42417604 + MLT1H LTR MaLR 21 498 -51 2072 103 0 60 chr17 47086949 47087278 -42417275 + AluSq SINE Alu 1 311 0 778 242 142 60 chr17 47087278 47087333 -42417220 + MLT1H LTR MaLR 498 547 -2 2129 133 10 7 chr17 47087525 47087827 -42416726 - AluSx SINE Alu -9 303 1 2370 109 0 0 chr17 47087842 47088146 -42416407 - AluSx SINE Alu -8 304 1 321 309 60 0 chr17 47088192 47088393 -42416160 + L1ME4a LINE L1 5690 5902 -219 779 199 0 0 chr17 47088402 47088533 -42416020 + FLAM_C SINE Alu 2 132 -1 459 0 0 0 chr17 47088627 47088678 -42415875 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2389 97 3 0 chr17 47088682 47088982 -42415571 + AluSp SINE Alu 1 301 -12 1819 172 3 7 chr17 47088983 47089291 -42415262 + AluJb SINE Alu 1 307 -5 948 163 4 104 chr17 47089312 47089563 -42414990 + L1MB7 LINE L1 5951 6176 -8 1844 157 10 45 chr17 47089659 47089833 -42414720 - AluJo SINE Alu -10 302 142 2405 99 3 0 chr17 47089833 47090137 -42414416 - AluSp SINE Alu -7 306 2 1844 157 10 45 chr17 47090137 47090275 -42414278 - AluJo SINE Alu -170 142 1 2425 74 0 7 chr17 47090294 47090592 -42413961 + AluY SINE Alu 1 296 -15 1507 148 126 11 chr17 47090592 47090857 -42413696 - AluJb SINE Alu -6 296 1 1615 153 38 31 chr17 47090857 47091144 -42413409 - AluJb SINE Alu -23 289 1 1892 171 0 16 chr17 47091191 47091501 -42413052 - AluSx SINE Alu -7 305 1 2172 117 3 3 chr17 47091569 47091859 -42412694 + AluSg SINE Alu 2 291 -19 2374 101 3 0 chr17 47092814 47093120 -42411433 - AluSp SINE Alu -6 307 1 1988 156 0 0 chr17 47093454 47093742 -42410811 + AluSx SINE Alu 1 288 -24 1972 137 10 23 chr17 47093809 47094109 -42410444 + AluSx SINE Alu 1 296 -16 1329 171 25 0 chr17 47094112 47094357 -42410196 + L1MB8 LINE L1 5484 5734 -444 2446 160 29 5 chr17 47095257 47095700 -42408853 + L1MB8 LINE L1 5725 6178 0 2252 116 0 0 chr17 47095709 47096001 -42408552 + AluSc SINE Alu 1 292 -17 1120 121 13 0 chr17 47096001 47096158 -42408395 - AluSg/x SINE Alu -18 294 136 1847 205 114 41 chr17 47096185 47096534 -42408019 + L1MC4a LINE L1 7181 7503 -305 2418 65 24 3 chr17 47096534 47096824 -42407729 - AluSc SINE Alu -13 296 1 1847 205 114 41 chr17 47096824 47096926 -42407627 + L1MC4a LINE L1 7503 7596 -212 1964 146 3 38 chr17 47096926 47097241 -42407312 - AluJb SINE Alu -8 304 1 2228 116 3 7 chr17 47097248 47097549 -42407004 - AluSx SINE Alu -12 300 1 1847 205 114 41 chr17 47097549 47097673 -42406880 + L1MC4a LINE L1 7601 7808 0 393 263 100 63 chr17 47097702 47097892 -42406661 + HAL1 LINE L1 1097 1293 -1214 396 250 179 26 chr17 47097898 47098250 -42406303 + HAL1 LINE L1 1 406 -2101 1169 206 5 9 chr17 47098262 47098480 -42406073 + MER20 DNA MER1_type 3 219 0 338 301 15 22 chr17 47098480 47098616 -42405937 + HAL1 LINE L1 485 619 -1888 402 252 75 31 chr17 47198658 47198817 -42305736 - MIR3 SINE MIR -4 204 39 604 122 28 0 chr17 47199433 47199540 -42305013 + MIR SINE MIR 29 138 -124 203 146 24 0 chr17 47199896 47199937 -42304616 + GA-rich Low_complexity Low_complexity 3 44 0 659 185 15 22 chr17 47200185 47200320 -42304233 + AluJo SINE Alu 2 135 -177 1512 167 56 42 chr17 47200321 47200627 -42303926 + AluJo SINE Alu 2 311 -1 1841 131 69 0 chr17 47200631 47200906 -42303647 + AluSg SINE Alu 1 294 -16 1457 198 52 24 chr17 47201273 47201601 -42302952 - MER58B DNA MER1_type -1 340 4 209 360 128 24 chr17 47201607 47201771 -42302782 - L3b LINE CR1 -24 1559 1379 206 351 213 13 chr17 47201853 47202078 -42302475 - L3b LINE CR1 -202 1381 1112 1212 81 0 7 chr17 47204058 47204206 -42300347 - AluSg SINE Alu -163 147 1 257 306 47 24 chr17 47204208 47204293 -42300260 + MLT1H1 LTR MaLR 235 321 -274 498 148 0 11 chr17 47204331 47204419 -42300134 + FLAM SINE Alu 38 124 -19 927 215 42 0 chr17 47204419 47204610 -42299943 + MLT1H1 LTR MaLR 344 542 -13 293 276 20 99 chr17 47204621 47204700 -42299853 - MIR SINE MIR -121 141 78 2114 151 0 19 chr17 47204700 47205018 -42299535 + AluJo SINE Alu 1 312 0 293 276 20 99 chr17 47205018 47205090 -42299463 - MIR SINE MIR -184 78 2 288 170 0 0 chr17 47205255 47205302 -42299251 - MER3 DNA MER1_type -5 204 158 392 209 0 0 chr17 47205305 47205372 -42299181 + AluJ/FLAM SINE Alu 1 67 -235 1073 127 117 46 chr17 47205670 47205867 -42298686 + AluJo SINE Alu 80 290 -22 735 208 74 20 chr17 47207098 47207300 -42297253 + MER20 DNA MER1_type 6 218 -1 1356 172 0 115 chr17 47207873 47208211 -42296342 + AluJo SINE Alu 3 301 -1 2420 71 10 0 chr17 47208946 47209241 -42295312 + AluY SINE Alu 1 298 -13 430 220 5 170 chr17 47209272 47209426 -42295127 - L1M4 LINE L1 -760 5386 5279 1674 148 59 7 chr17 47209426 47209696 -42294857 - AluJo SINE Alu -22 290 7 430 220 5 170 chr17 47209696 47209764 -42294789 - L1M4 LINE L1 -867 5279 5201 673 239 0 0 chr17 47209777 47209955 -42294598 - FLAM_A SINE Alu 0 178 1 1325 85 44 114 chr17 47209956 47210111 -42294442 + Tigger7 DNA MER2_type 2240 2370 -121 2069 90 76 17 chr17 47210111 47210399 -42294154 + AluSx SINE Alu 1 305 -7 1325 85 44 114 chr17 47210399 47210514 -42294039 + Tigger7 DNA MER2_type 2370 2491 0 190 119 0 119 chr17 47210618 47210636 -42293917 - L2 LINE L2 -7 3306 3294 2222 97 17 0 chr17 47210636 47210926 -42293627 + AluSq SINE Alu 1 295 -18 190 119 0 119 chr17 47210926 47210949 -42293604 - L2 LINE L2 -19 3294 3270 193 238 62 38 chr17 47211142 47211222 -42293331 - L2 LINE L2 -856 2458 2377 852 136 25 6 chr17 47211442 47211694 -42292859 + AluJ SINE Alu 1 296 -16 2274 129 0 0 chr17 47212291 47212594 -42291959 + AluSx SINE Alu 1 303 -9 915 261 8 39 chr17 47212634 47212891 -42291662 - MIR SINE MIR 0 262 14 2248 112 0 3 chr17 47212946 47213240 -42291313 - AluSg SINE Alu -15 295 3 1745 113 3 103 chr17 47213243 47213578 -42290975 - AluY SINE Alu 0 304 1 2233 122 0 7 chr17 47213583 47213887 -42290666 - AluJb SINE Alu -10 302 1 1928 125 0 4 chr17 47214110 47214374 -42290179 - AluSx SINE Alu -49 263 1 380 326 111 0 chr17 47214539 47214720 -42289833 + MIR SINE MIR 48 248 -14 334 294 49 56 chr17 47215582 47215725 -42288828 + MIR SINE MIR 90 231 -31 2237 121 0 13 chr17 47216057 47216371 -42288182 - AluSx SINE Alu 0 312 3 198 123 14 27 chr17 47216371 47216406 -42288147 - MIR SINE MIR -114 148 114 276 194 204 9 chr17 47216553 47216661 -42287892 - MIR SINE MIR -14 248 120 1627 133 27 63 chr17 47216661 47216961 -42287592 + AluJb SINE Alu 1 289 -23 1119 154 12 0 chr17 47216976 47217145 -42287408 + FRAM SINE Alu 1 167 -9 2114 90 4 8 chr17 47217145 47217411 -42287142 + AluSx SINE Alu 1 265 -47 2690 193 35 47 chr17 47217422 47218376 -42286177 - LTR13 LTR ERVK -12 995 1 754 224 6 0 chr17 47218446 47218607 -42285946 - AluJ SINE Alu -14 298 137 297 219 178 0 chr17 47218609 47218682 -42285871 - MER45 DNA AcHobo -1495 86 1 192 255 49 60 chr17 47218682 47218835 -42285718 + MIR3 SINE MIR 47 198 -10 2238 111 13 0 chr17 47219255 47219553 -42285000 - AluSx SINE Alu -9 303 2 23 0 0 0 chr17 47219559 47219582 -42284971 + AT_rich Low_complexity Low_complexity 1 23 0 816 119 0 37 chr17 47219582 47219716 -42284837 - AluJ SINE Alu -170 132 4 1977 126 18 0 chr17 47219732 47220010 -42284543 - AluSx SINE Alu -9 303 21 2594 62 0 0 chr17 47220033 47220337 -42284216 - AluY SINE Alu -7 304 1 435 278 127 19 chr17 47220350 47220555 -42283998 + L1MB8 LINE L1 5108 5334 -812 612 220 146 40 chr17 47220585 47220652 -42283901 + MLT2D LTR ERVL 86 144 -270 6841 57 28 0 chr17 47220652 47221525 -42283028 + MER11D LTR ERVK 1 897 0 612 220 146 40 chr17 47221525 47221666 -42282887 + MLT2D LTR ERVL 144 313 -101 1200 153 18 31 chr17 47221666 47221894 -42282659 + L1MB8 LINE L1 5465 5689 -495 1959 156 3 7 chr17 47221896 47222197 -42282356 + AluJb SINE Alu 1 300 -12 1300 181 108 25 chr17 47222219 47222496 -42282057 + AluJb SINE Alu 6 305 -7 2131 147 3 6 chr17 47222498 47222811 -42281742 + AluSx SINE Alu 1 312 0 1249 171 117 7 chr17 47222811 47223085 -42281468 + L1MB8 LINE L1 5823 6126 -52 949 106 16 0 chr17 47223107 47223230 -42281323 - AluSg/x SINE Alu -32 280 156 200 256 0 0 chr17 47223263 47223302 -42281251 + polypurine Low_complexity Low_complexity 2 40 0 955 213 19 5 chr17 47223315 47223526 -42281027 - MER20 DNA MER1_type -3 216 3 321 169 0 0 chr17 47224638 47224697 -42279856 + (CAGGA)n Simple_repeat Simple_repeat 2 60 0 580 160 130 23 chr17 47224710 47224841 -42279712 + FRAM SINE Alu 11 155 -21 2515 63 3 3 chr17 47224850 47225153 -42279400 + AluSc SINE Alu 3 305 -4 189 107 0 0 chr17 47227378 47227406 -42277147 + (CA)n Simple_repeat Simple_repeat 2 29 0 2223 39 46 3 chr17 47229530 47229812 -42274741 + AluY SINE Alu 1 294 -17 1218 202 20 47 chr17 47229817 47230114 -42274439 + AluJo SINE Alu 1 289 -23 443 222 83 32 chr17 47230282 47230498 -42274055 + AluSg SINE Alu 1 227 -73 541 255 67 42 chr17 47230762 47231001 -42273552 + L2 LINE L2 2983 3227 -86 1055 124 0 72 chr17 47231003 47231197 -42273356 + AluSx SINE Alu 1 180 -132 180 158 0 0 chr17 47231488 47231526 -42273027 + A-rich Low_complexity Low_complexity 1 38 0 182 61 0 30 chr17 47231712 47231745 -42272808 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 216 0 0 0 chr17 47232350 47232374 -42272179 + (A)n Simple_repeat Simple_repeat 1 24 0 1767 118 26 20 chr17 47232381 47232685 -42271868 + AluSx SINE Alu 1 306 -6 415 239 11 0 chr17 47233582 47233670 -42270883 - L2 LINE L2 0 3313 3225 315 0 0 0 chr17 47234271 47234306 -42270247 + (CA)n Simple_repeat Simple_repeat 2 36 0 503 278 23 0 chr17 47236422 47236555 -42267998 + MIR SINE MIR 127 262 0 444 287 112 7 chr17 47236691 47236834 -42267719 + MIR SINE MIR 64 221 -41 521 298 29 34 chr17 47237679 47237887 -42266666 + Charlie8 DNA MER1_type 102 308 -2109 330 348 106 12 chr17 47238940 47239101 -42265452 + MER5A DNA MER1_type 14 189 0 1250 190 0 36 chr17 47241681 47241960 -42262593 + AluJo SINE Alu 1 269 -43 616 227 8 0 chr17 47241997 47242116 -42262437 - MIR SINE MIR -31 231 112 2242 102 0 0 chr17 47242116 47242429 -42262124 + AluSq SINE Alu 1 313 0 197 342 18 27 chr17 47242603 47242714 -42261839 + L2 LINE L2 2230 2339 -975 306 180 0 0 chr17 47243558 47243619 -42260934 + (CA)n Simple_repeat Simple_repeat 2 62 0 24 53 0 0 chr17 47244309 47244347 -42260206 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr17 47244541 47244569 -42259984 + AT_rich Low_complexity Low_complexity 1 28 0 459 304 89 21 chr17 47244905 47245096 -42259457 - Charlie8 DNA MER1_type -2211 206 3 221 234 21 0 chr17 47245108 47245155 -42259398 + MIR SINE MIR 47 94 -114 208 150 0 25 chr17 47245401 47245441 -42259112 + MER5A DNA MER1_type 36 74 -115 2367 63 13 0 chr17 47245442 47245741 -42258812 + AluSp SINE Alu 1 303 -10 765 158 8 23 chr17 47245752 47245885 -42258668 + FLAM_C SINE Alu 1 131 -2 2213 94 7 3 chr17 47245954 47246261 -42258292 - AluSq SINE Alu -5 308 1 544 60 0 24 chr17 47246657 47246740 -42257813 + (TTC)n Simple_repeat Simple_repeat 1 81 0 1099 168 0 37 chr17 47246765 47246979 -42257574 - AluJo SINE Alu -106 206 1 1061 127 0 18 chr17 47247141 47247306 -42257247 + AluSq SINE Alu 131 292 -21 953 138 0 48 chr17 47247468 47247635 -42256918 + FRAM SINE Alu 5 163 -13 207 254 111 0 chr17 47247643 47247706 -42256847 - MIR SINE MIR -111 151 82 2131 102 7 14 chr17 47247798 47248093 -42256460 + AluSg SINE Alu 1 293 -17 2044 125 0 3 chr17 47248119 47248416 -42256137 + AluSx SINE Alu 1 296 -16 230 273 113 87 chr17 47248640 47248680 -42255873 - MIR3 SINE MIR -21 187 150 2213 69 3 3 chr17 47248680 47248970 -42255583 - AluY SINE Alu -21 290 1 230 273 113 87 chr17 47248970 47249010 -42255543 - MIR3 SINE MIR -58 150 113 1500 176 10 55 chr17 47249010 47249317 -42255236 + AluJo SINE Alu 6 298 -14 230 273 113 87 chr17 47249317 47249385 -42255168 - MIR3 SINE MIR -95 113 34 2112 118 6 6 chr17 47249449 47249762 -42254791 + AluSq SINE Alu 1 313 0 1886 133 0 3 chr17 47250479 47250764 -42253789 - AluSq SINE Alu -29 284 1 1686 183 6 16 chr17 47251281 47251592 -42252961 + AluJb SINE Alu 1 308 -4 1486 184 23 23 chr17 47252154 47252459 -42252094 - AluJo SINE Alu -7 305 1 1610 170 10 7 chr17 47252491 47252780 -42251773 + AluJb SINE Alu 1 290 -22 220 255 39 0 chr17 47253044 47253095 -42251458 + L2 LINE L2 3194 3246 -26 270 81 0 0 chr17 47253095 47253132 -42251421 + (TC)n Simple_repeat Simple_repeat 2 38 0 243 148 37 0 chr17 47253140 47253194 -42251359 - L1MC4 LINE L1 -1339 6703 6648 198 0 0 0 chr17 47253195 47253217 -42251336 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2122 92 3 0 chr17 47253223 47253506 -42251047 - AluSq SINE Alu -27 286 3 2072 96 4 0 chr17 47253533 47253813 -42250740 - AluSq SINE Alu -32 281 1 2038 97 10 10 chr17 47254107 47254395 -42250158 + AluSc SINE Alu 1 288 -21 705 182 91 0 chr17 47254696 47254828 -42249725 + AluJb SINE Alu 150 293 -19 27 0 0 0 chr17 47255085 47255112 -42249441 + AT_rich Low_complexity Low_complexity 1 27 0 2231 87 7 0 chr17 47255173 47255471 -42249082 + AluSp SINE Alu 1 300 -13 216 0 0 0 chr17 47255613 47255637 -42248916 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 204 143 29 0 chr17 47257656 47257691 -42246862 + (TATATG)n Simple_repeat Simple_repeat 2 37 0 29 0 0 0 chr17 47257920 47257949 -42246604 + AT_rich Low_complexity Low_complexity 1 29 0 313 317 30 10 chr17 47258979 47259080 -42245473 - MIR SINE MIR -137 125 23 2230 95 0 22 chr17 47259200 47259515 -42245038 - AluSq SINE Alu -5 308 1 2158 112 0 10 chr17 47259539 47259852 -42244701 + AluSq SINE Alu 2 311 -2 294 235 118 29 chr17 47260357 47260459 -42244094 + MIR SINE MIR 134 244 -18 263 250 16 16 chr17 47260496 47260560 -42243993 + AluS SINE Alu 1 64 -239 481 36 0 0 chr17 47260577 47260632 -42243921 - AluSg/x SINE Alu -190 120 66 1175 155 0 5 chr17 47260633 47260833 -42243720 - AluSx SINE Alu -113 199 1 444 289 158 33 chr17 47260956 47261087 -42243466 + L2 LINE L2 1805 1918 -1396 1815 111 39 7 chr17 47261087 47261397 -42243156 - AluSx SINE Alu 0 320 2 444 289 158 33 chr17 47261397 47261600 -42242953 + L2 LINE L2 1918 2182 -1132 520 344 127 4 chr17 47261653 47261929 -42242624 + L2 LINE L2 3004 3313 0 1096 171 93 35 chr17 47262129 47262387 -42242166 + AluJo SINE Alu 1 273 -39 25 0 0 0 chr17 47263182 47263207 -42241346 + AT_rich Low_complexity Low_complexity 1 25 0 1362 184 20 0 chr17 47263322 47263567 -42240986 - AluJo SINE Alu -23 289 40 251 233 14 14 chr17 47263582 47263655 -42240898 - HAL1 LINE L1 0 2507 2435 25 0 0 0 chr17 47263687 47263712 -42240841 + AT_rich Low_complexity Low_complexity 1 25 0 2084 125 6 10 chr17 47263854 47264166 -42240387 - AluSx SINE Alu -1 311 1 341 224 9 35 chr17 47264189 47264305 -42240248 - L1MB4 LINE L1 -1 6179 6067 2055 84 0 40 chr17 47264310 47264609 -42239944 + AluSx SINE Alu 7 293 -19 1805 160 100 64 chr17 47264615 47265096 -42239457 - L1M4 LINE L1 -2049 4097 3600 222 136 0 0 chr17 47265166 47265210 -42239343 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 1030 93 33 0 chr17 47265225 47265375 -42239178 - AluSg/x SINE Alu -24 288 134 1959 125 10 0 chr17 47265375 47265542 -42239011 - AluSx SINE Alu -14 298 134 198 0 0 0 chr17 47265542 47265564 -42238989 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 333 0 0 0 chr17 47265568 47265605 -42238948 + (TG)n Simple_repeat Simple_repeat 2 38 0 1959 125 10 0 chr17 47265605 47265720 -42238833 - AluSx SINE Alu -180 132 8 230 103 0 0 chr17 47265725 47265764 -42238789 - L1ME3A LINE L1 -220 5950 5912 2320 52 14 0 chr17 47266106 47266395 -42238158 - AluY SINE Alu -18 293 1 228 125 0 0 chr17 47266424 47266456 -42238097 - AluJb SINE Alu -13 289 258 1808 144 14 4 chr17 47266456 47266734 -42237819 - AluJb SINE Alu -31 281 1 2161 117 0 0 chr17 47266745 47267044 -42237509 - AluSx SINE Alu -13 299 1 1209 162 0 5 chr17 47267064 47267255 -42237298 - AluJo SINE Alu -122 190 1 293 82 20 0 chr17 47267300 47267349 -42237204 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 25 31 0 0 chr17 47267904 47267936 -42236617 + AT_rich Low_complexity Low_complexity 1 32 0 1252 171 0 5 chr17 47267962 47268173 -42236380 + AluJb SINE Alu 85 294 -18 251 239 0 15 chr17 47268215 47268282 -42236271 - L1MC4 LINE L1 -1340 6702 6637 * 359 250 119 54 chr17 47268274 47268361 -42236192 - HAL1b LINE L1 -813 535 455 339 44 0 0 chr17 47268361 47268406 -42236147 + (GA)n Simple_repeat Simple_repeat 1 45 0 359 250 119 54 chr17 47268406 47268578 -42235975 - HAL1b LINE L1 -893 455 259 1981 138 0 3 chr17 47268630 47268934 -42235619 - AluJb SINE Alu -9 303 1 1430 195 8 0 chr17 47269426 47269693 -42234860 + AluJb SINE Alu 1 269 -43 777 123 0 9 chr17 47270431 47270545 -42234008 - MER46A DNA MER2_type 0 236 124 1871 89 100 0 chr17 47271998 47272268 -42232285 - AluSg SINE Alu -13 297 1 2292 35 42 3 chr17 47272477 47272760 -42231793 + AluY SINE Alu 1 294 -17 1512 169 19 45 chr17 47272765 47273078 -42231475 + AluJo SINE Alu 1 305 -7 1829 169 10 3 chr17 47273230 47273538 -42231015 + AluSx SINE Alu 1 310 -2 2086 118 7 0 chr17 47273591 47273887 -42230666 + AluSx SINE Alu 1 298 -14 1407 77 0 0 chr17 47273889 47274071 -42230482 - AluSp SINE Alu -6 307 126 1812 127 31 7 chr17 47274102 47274393 -42230160 + AluSx SINE Alu 1 298 -14 878 192 69 20 chr17 47274655 47274858 -42229695 + MER20 DNA MER1_type 6 218 -1 1455 175 0 115 chr17 47275431 47275769 -42228784 + AluJo SINE Alu 3 301 -1 2369 71 7 3 chr17 47276504 47276798 -42227755 + AluSc SINE Alu 1 295 -14 234 150 0 0 chr17 47277052 47277092 -42227461 + (TCCC)n Simple_repeat Simple_repeat 3 42 0 205 243 0 0 chr17 47277092 47277129 -42227424 + polypyrimidine Low_complexity Low_complexity 2 38 0 593 256 84 68 chr17 47277226 47277547 -42227006 + MER102a DNA MER1_type 2 327 -3 1197 163 0 21 chr17 47277736 47277926 -42226627 + AluJb SINE Alu 1 186 -126 673 161 0 36 chr17 47278110 47278222 -42226331 + AluSg/x SINE Alu 188 295 -17 2072 116 3 30 chr17 47278944 47279247 -42225306 + AluSx SINE Alu 1 295 -17 1236 191 30 9 chr17 47279718 47279949 -42224604 + MER46A DNA MER2_type 1 236 0 3176 168 60 12 chr17 47279971 47280649 -42223904 + L1MB8 LINE L1 5427 6137 -41 1618 161 28 14 chr17 47280651 47280936 -42223617 + AluJo SINE Alu 1 289 -23 370 326 0 0 chr17 47281059 47281178 -42223375 + L1MC4 LINE L1 6614 6703 -1339 * 389 216 18 9 chr17 47281073 47281186 -42223367 - L1MC4 LINE L1 -1340 6982 1995 1909 144 43 0 chr17 47281335 47281612 -42222941 + AluSx SINE Alu 1 289 -23 1145 114 38 0 chr17 47281612 47281770 -42222783 + AluSg/x SINE Alu 132 295 -15 250 162 0 0 chr17 47281774 47281811 -42222742 + Alu SINE Alu 1 37 -264 1168 149 0 0 chr17 47281812 47281986 -42222567 + AluSg/x SINE Alu 127 300 -10 1484 170 27 63 chr17 47282542 47282571 -42221982 - AluJo SINE Alu -12 300 271 2256 123 10 0 chr17 47282571 47282879 -42221674 + AluSx SINE Alu 1 311 -1 1484 170 27 63 chr17 47282879 47283032 -42221521 - AluJo SINE Alu -41 271 131 2339 95 0 0 chr17 47283032 47283317 -42221236 + AluSp SINE Alu 1 285 -28 1484 170 27 63 chr17 47283317 47283433 -42221120 - AluJo SINE Alu -181 131 12 192 349 47 77 chr17 47283440 47283609 -42220944 - L2 LINE L2 -9 3263 3100 195 375 39 29 chr17 47285357 47285461 -42219092 - L2 LINE L2 -6 3266 3162 312 316 139 6 chr17 47285491 47285649 -42218904 - MIR SINE MIR -49 213 35 1994 159 3 7 chr17 47285896 47286205 -42218348 + 7SLRNA srpRNA srpRNA 1 308 -12 226 291 205 34 chr17 47286212 47286329 -42218224 + L3b LINE CR1 1434 1570 -13 2093 134 0 10 chr17 47286772 47287070 -42217483 + AluSx SINE Alu 5 299 -13 2236 130 0 0 chr17 47287298 47287597 -42216956 + AluSx SINE Alu 1 299 -13 229 263 0 0 chr17 47287913 47287970 -42216583 + T-rich Low_complexity Low_complexity 3 59 0 25 90 0 0 chr17 47289379 47289446 -42215107 + AT_rich Low_complexity Low_complexity 1 67 0 2488 72 0 0 chr17 47289452 47289745 -42214808 + AluY SINE Alu 2 294 -17 2554 66 3 0 chr17 47289747 47290048 -42214505 + AluSp SINE Alu 1 302 -11 2585 97 66 21 chr17 47290062 47290486 -42214067 - L1MA5A LINE L1 -2 6295 5853 554 268 85 6 chr17 47290587 47290751 -42213802 + MIR SINE MIR 73 249 -13 1970 155 0 17 chr17 47290813 47291110 -42213443 + AluJb SINE Alu 2 293 -19 2324 113 0 0 chr17 47291261 47291563 -42212990 + AluSq SINE Alu 1 302 -11 1464 176 20 47 chr17 47291742 47291882 -42212671 + AluJo SINE Alu 7 149 -163 2182 106 10 3 chr17 47291882 47292175 -42212378 + AluSc SINE Alu 1 295 -14 1464 176 20 47 chr17 47292175 47292330 -42212223 + AluJo SINE Alu 149 294 -18 736 191 0 8 chr17 47292622 47292753 -42211800 - FLAM_C SINE Alu -2 131 2 2390 87 0 16 chr17 47292906 47293215 -42211338 - AluSg SINE Alu -6 304 1 2311 121 0 6 chr17 47293220 47293533 -42211020 - AluSx SINE Alu -1 311 1 1102 107 47 0 chr17 47300837 47300986 -42203567 + AluSg/x SINE Alu 126 281 -31 207 0 0 0 chr17 47300990 47301013 -42203540 + (CA)n Simple_repeat Simple_repeat 1 23 0 2247 114 6 35 chr17 47301032 47301348 -42203205 + AluSx SINE Alu 1 307 -5 2162 109 14 7 chr17 47301350 47301643 -42202910 + AluSg SINE Alu 1 295 -15 190 328 90 22 chr17 47301977 47302111 -42202442 + L2 LINE L2 3167 3309 -4 1883 172 3 3 chr17 47302122 47302418 -42202135 + AluJo SINE Alu 1 296 -16 2154 129 10 16 chr17 47302490 47302801 -42201752 - AluSp SINE Alu -3 310 2 234 0 0 0 chr17 47302801 47302827 -42201726 + (A)n Simple_repeat Simple_repeat 1 26 0 1673 187 18 0 chr17 47302827 47303110 -42201443 - AluJo SINE Alu -22 290 3 2358 116 0 0 chr17 47303134 47303444 -42201109 - AluSg SINE Alu 0 310 1 518 238 40 8 chr17 47303707 47303833 -42200720 + MIR SINE MIR 52 181 -81 862 174 0 14 chr17 47303984 47304122 -42200431 - AluJo SINE Alu -176 136 1 226 250 147 60 chr17 47304298 47304414 -42200139 - L2 LINE L2 -4 3309 3184 419 278 129 26 chr17 47305371 47305565 -42198988 - L2 LINE L2 -639 2675 2462 2585 55 0 49 chr17 47306290 47306438 -42198115 + AluSp SINE Alu 1 155 -158 2378 99 0 0 chr17 47306438 47306731 -42197822 + AluSg SINE Alu 1 293 -17 2585 55 0 49 chr17 47306731 47306907 -42197646 + AluSp SINE Alu 155 309 -4 187 319 29 14 chr17 47307061 47307130 -42197423 + MIR SINE MIR 27 96 -166 485 237 53 0 chr17 47307187 47307301 -42197252 + LTR16A LTR ERVL 82 201 -249 2481 78 3 3 chr17 47307400 47307709 -42196844 - AluSp SINE Alu -2 311 3 2555 76 0 0 chr17 47307711 47308014 -42196539 - AluSq SINE Alu -10 303 1 537 238 77 12 chr17 47308014 47308182 -42196371 + LTR16A LTR ERVL 228 406 -44 1041 202 130 8 chr17 47308194 47308456 -42196097 + AluJb SINE Alu 1 294 -8 196 247 27 68 chr17 47308486 47308559 -42195994 - MIR SINE MIR -20 242 173 356 333 17 8 chr17 47308877 47308997 -42195556 + MIR3 SINE MIR 52 172 -36 194 325 42 33 chr17 47310489 47310609 -42193944 + MIR3 SINE MIR 66 186 -22 581 308 184 36 chr17 47311834 47312578 -42191975 - L2 LINE L2 -558 2756 1903 1150 151 0 17 chr17 47312578 47312757 -42191796 + AluSg/x SINE Alu 135 310 0 355 333 18 6 chr17 47312778 47312943 -42191610 - L2 LINE L2 -1406 1908 1742 1773 167 31 3 chr17 47313327 47313614 -42190939 + AluJo SINE Alu 1 295 -17 2260 103 0 0 chr17 47313629 47313920 -42190633 + AluSx SINE Alu 5 295 -17 191 309 89 41 chr17 47314010 47314133 -42190420 + L2 LINE L2 3129 3257 -15 2305 103 0 10 chr17 47315701 47316002 -42188551 + AluSx SINE Alu 1 298 -14 2362 56 7 36 chr17 47316002 47316306 -42188247 + AluY SINE Alu 1 296 -15 226 219 80 118 chr17 47317016 47317203 -42187350 - L1ME4a LINE L1 0 6121 5942 351 294 20 68 chr17 47317615 47317761 -42186792 + MIR SINE MIR 18 156 -106 2407 99 0 0 chr17 47317761 47318065 -42186488 + AluSg SINE Alu 1 304 -6 2180 100 0 42 chr17 47318342 47318653 -42185900 + AluSx SINE Alu 1 298 -14 187 149 43 85 chr17 47319823 47319870 -42184683 - MER5B DNA MER1_type -97 81 37 2331 98 0 0 chr17 47321059 47321354 -42183199 + AluSx SINE Alu 11 305 -7 2261 99 27 0 chr17 47321819 47322111 -42182442 + AluSg SINE Alu 1 300 -10 726 167 68 62 chr17 47322119 47322281 -42182272 + AluJo SINE Alu 42 204 -108 2121 115 27 0 chr17 47322334 47322629 -42181924 + AluSx SINE Alu 1 303 -9 2379 95 3 0 chr17 47323260 47323567 -42180986 + AluSp SINE Alu 1 298 -15 2144 124 16 0 chr17 47323690 47323997 -42180556 - AluSx SINE Alu 0 312 1 1568 141 3 116 chr17 47324382 47324548 -42180005 + AluJo SINE Alu 1 114 -188 2162 99 0 3 chr17 47324548 47324841 -42179712 + AluSq SINE Alu 3 294 -19 1568 141 3 116 chr17 47324841 47325001 -42179552 + AluJo SINE Alu 114 290 -12 28 0 0 0 chr17 47325003 47325031 -42179522 + AT_rich Low_complexity Low_complexity 1 28 0 5148 112 110 117 chr17 47325048 47326614 -42177939 - pTR5 LTR ERV1 0 2438 743 1188 252 87 48 chr17 47326614 47326799 -42177754 - L2 LINE L2 -32 3281 3105 2269 84 10 0 chr17 47326799 47327107 -42177446 + AluSq SINE Alu 1 311 -2 414 53 0 0 chr17 47327107 47327164 -42177389 + (TA)n Simple_repeat Simple_repeat 2 58 0 1188 252 87 48 chr17 47327164 47327477 -42177076 - L2 LINE L2 -207 3106 2745 1028 320 114 68 chr17 47327693 47328116 -42176437 + L3 LINE CR1 423 825 -752 2260 90 7 7 chr17 47328116 47328426 -42176127 + AluY SINE Alu 1 310 -1 1028 320 114 68 chr17 47328426 47328979 -42175574 + L3 LINE CR1 825 1444 -133 434 228 50 83 chr17 47328991 47329171 -42175382 - MIR SINE MIR 0 262 89 2044 113 11 7 chr17 47329188 47329472 -42175081 + AluSq SINE Alu 1 285 -28 2387 71 0 0 chr17 47330407 47330701 -42173852 + AluSx SINE Alu 15 308 -4 25 51 0 0 chr17 47331299 47331338 -42173215 + GC_rich Low_complexity Low_complexity 1 39 0 325 299 68 0 chr17 47333442 47333559 -42170994 + MIR SINE MIR 96 220 -42 512 206 94 47 chr17 47334625 47334748 -42169805 + MIR SINE MIR 16 151 -111 729 210 40 23 chr17 47334748 47334924 -42169629 - MER104 DNA MER2_type -1 179 1 512 206 94 47 chr17 47334924 47334970 -42169583 + MIR SINE MIR 151 193 -69 486 284 132 16 chr17 47335721 47335911 -42168642 + MIR SINE MIR 47 258 -4 364 296 45 45 chr17 47336080 47336259 -42168294 - L2 LINE L2 -6 3266 3088 1951 127 26 10 chr17 47336537 47336844 -42167709 - AluSq SINE Alu -1 312 1 180 278 72 21 chr17 47337038 47337135 -42167418 + L2 LINE L2 2915 3016 -256 775 261 86 4 chr17 47337215 47337449 -42167104 + MIR SINE MIR 6 258 -4 252 0 0 0 chr17 47337496 47337524 -42167029 + (CA)n Simple_repeat Simple_repeat 2 29 0 663 207 11 37 chr17 47337532 47337561 -42166992 - MER3 DNA MER1_type -5 204 176 180 77 0 0 chr17 47337561 47337587 -42166966 + (TTAAA)n Simple_repeat Simple_repeat 5 30 0 2219 96 0 0 chr17 47337597 47337888 -42166665 - AluSg SINE Alu -19 291 1 2133 114 3 0 chr17 47337888 47338185 -42166368 - AluSp SINE Alu -11 302 5 663 207 11 37 chr17 47338185 47338331 -42166222 - MER3 DNA MER1_type -40 169 22 224 294 0 0 chr17 47338332 47338383 -42166170 + L2 LINE L2 3192 3242 -30 29 90 0 0 chr17 47340687 47340765 -42163788 + GC_rich Low_complexity Low_complexity 1 78 0 209 105 79 0 chr17 47340817 47340855 -42163698 + G-rich Low_complexity Low_complexity 2 42 0 54 56 0 0 chr17 47341122 47341211 -42163342 + GC_rich Low_complexity Low_complexity 1 89 0 24 85 0 0 chr17 47341308 47341367 -42163186 + GC_rich Low_complexity Low_complexity 1 59 0 31 68 0 0 chr17 47341542 47341601 -42162952 + GC_rich Low_complexity Low_complexity 1 59 0 188 236 80 94 chr17 47347069 47347169 -42157384 - MIR SINE MIR -10 252 152 729 197 0 23 chr17 47347169 47347301 -42157252 - FLAM_A SINE Alu -2 131 3 1861 106 87 0 chr17 47347310 47347585 -42156968 - AluSx SINE Alu -13 299 1 188 236 80 94 chr17 47347585 47347632 -42156921 - MIR SINE MIR -118 144 101 2090 110 0 20 chr17 47347672 47347973 -42156580 + AluSg SINE Alu 5 299 -11 1062 146 114 41 chr17 47348024 47348110 -42156443 - MER2 DNA MER2_type -80 265 187 2260 113 0 3 chr17 47348110 47348421 -42156132 - AluSx SINE Alu -2 310 1 1062 146 114 41 chr17 47348421 47348580 -42155973 - MER2 DNA MER2_type -158 187 2 232 290 108 11 chr17 47348738 47348831 -42155722 + MIR SINE MIR 47 148 -114 2506 59 0 0 chr17 47350328 47350631 -42153922 - AluSc SINE Alu -4 305 3 645 196 109 7 chr17 47350633 47350771 -42153782 - FRAM SINE Alu -14 162 11 321 169 0 0 chr17 47350784 47350843 -42153710 + (TCCTG)n Simple_repeat Simple_repeat 2 60 0 1067 213 19 5 chr17 47351955 47352166 -42152387 + MER20 DNA MER1_type 3 216 -3 200 256 0 0 chr17 47352179 47352218 -42152335 + polypyrimidine Low_complexity Low_complexity 2 40 0 903 106 16 0 chr17 47352251 47352374 -42152179 + AluSg/x SINE Alu 156 280 -32 1149 171 117 7 chr17 47352396 47352670 -42151883 - L1MB8 LINE L1 -52 6126 5823 2095 141 3 6 chr17 47352670 47352983 -42151570 - AluSx SINE Alu 0 312 1 1239 181 108 25 chr17 47352985 47353262 -42151291 - AluJo SINE Alu -7 305 6 1864 157 3 7 chr17 47353284 47353584 -42150969 - AluJb SINE Alu -13 299 1 1117 153 18 31 chr17 47353586 47353814 -42150739 - L1MB8 LINE L1 -495 5689 5465 556 217 147 40 chr17 47353814 47353955 -42150598 - MLT2D LTR ERVL -101 313 144 7292 56 26 0 chr17 47353955 47354829 -42149724 - MER11D LTR ERVK 0 897 1 556 217 147 40 chr17 47354829 47354885 -42149668 - MLT2D LTR ERVL -270 144 95 493 278 127 19 chr17 47354926 47355131 -42149422 - L1MB8 LINE L1 -812 5334 5108 2468 62 0 0 chr17 47355144 47355448 -42149105 + AluY SINE Alu 1 304 -7 1883 126 18 0 chr17 47355471 47355749 -42148804 + AluSx SINE Alu 21 303 -9 868 111 0 44 chr17 47355765 47355900 -42148653 + AluJ SINE Alu 4 132 -170 23 0 0 0 chr17 47355900 47355923 -42148630 + AT_rich Low_complexity Low_complexity 1 23 0 2179 104 13 0 chr17 47355929 47356227 -42148326 + AluSx SINE Alu 2 303 -9 215 283 56 40 chr17 47356649 47356802 -42147751 - MIR3 SINE MIR -10 198 47 271 219 178 0 chr17 47356802 47356875 -42147678 + MER45A DNA AcHobo 1 86 -92 827 216 0 0 chr17 47356877 47357039 -42147514 + AluJ SINE Alu 137 298 -14 4249 193 35 49 chr17 47357109 47358076 -42146477 + LTR13 LTR ERVK 1 954 0 2053 102 0 0 chr17 47358076 47358341 -42146212 - AluSq SINE Alu -48 265 1 360 139 42 0 chr17 47358345 47358417 -42146136 + MER45A DNA AcHobo 104 178 0 1088 163 5 24 chr17 47358442 47358472 -42146081 + AluSg/x SINE Alu 108 137 -175 1796 126 0 22 chr17 47358472 47358743 -42145810 + AluSx SINE Alu 41 305 -7 1088 163 5 24 chr17 47358743 47358921 -42145632 + AluSg/x SINE Alu 137 312 0 316 325 18 9 chr17 47359364 47359478 -42145075 + MIR3 SINE MIR 2 116 -92 1660 161 45 11 chr17 47359496 47359782 -42144771 - AluJo SINE Alu -4 308 13 2071 115 14 3 chr17 47359817 47360113 -42144440 - AluJb SINE Alu -13 299 1 437 323 110 8 chr17 47360231 47360459 -42144094 + MIR SINE MIR 1 248 -14 353 294 49 56 chr17 47361321 47361464 -42143089 + MIR SINE MIR 90 231 -31 2130 121 0 13 chr17 47361796 47362110 -42142443 - AluSx SINE Alu 0 312 3 188 184 0 0 chr17 47362115 47362153 -42142400 - MIR SINE MIR -65 143 106 298 189 198 9 chr17 47362292 47362403 -42142150 - MIR SINE MIR -14 248 117 1549 130 0 67 chr17 47362415 47362700 -42141853 + AluJb SINE Alu 24 289 -23 1068 154 12 0 chr17 47362715 47362884 -42141669 + FRAM SINE Alu 1 167 -9 1958 105 87 0 chr17 47362884 47363170 -42141383 + AluSp SINE Alu 1 311 -2 288 294 17 42 chr17 47363171 47363290 -42141263 - MER20B DNA MER1_type -379 404 289 1127 131 86 20 chr17 47363300 47363498 -42141055 + AluJb SINE Alu 86 296 -16 610 261 42 73 chr17 47363500 47363787 -42140766 - MER20B DNA MER1_type -500 283 6 328 284 43 43 chr17 47363985 47364147 -42140406 - L1MC/D LINE L1 -2083 5725 5564 301 320 0 31 chr17 47364355 47364452 -42140101 + L1MC3 LINE L1 6552 6645 -1140 * 384 302 8 0 chr17 47364367 47364493 -42140060 - L1MCa LINE L1 -1339 6983 1996 1471 106 0 0 chr17 47364498 47364696 -42139857 - AluSg/x SINE Alu -9 303 106 1832 128 40 24 chr17 47364715 47365013 -42139540 - AluJo SINE Alu -9 303 1 540 204 19 38 chr17 47365015 47365172 -42139381 - L1MC4 LINE L1 -141 7901 7748 1540 131 0 0 chr17 47365172 47365386 -42139167 + AluSx SINE Alu 1 214 -98 881 109 73 0 chr17 47365386 47365503 -42139050 + AluSq/x SINE Alu 4 134 -178 441 36 0 0 chr17 47365503 47365558 -42138995 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 881 109 73 0 chr17 47365558 47365577 -42138976 + AluSq/x SINE Alu 134 150 -162 2814 19 0 0 chr17 47365720 47366036 -42138517 + AluYb8 SINE Alu 1 316 -2 521 245 32 45 chr17 47367228 47367383 -42137170 - MIR SINE MIR -15 247 95 261 345 92 0 chr17 47367490 47367609 -42136944 + MIR3 SINE MIR 51 180 -28 2034 106 0 0 chr17 47367724 47368026 -42136527 - AluSx SINE Alu 0 315 14 254 194 60 0 chr17 47368382 47368449 -42136104 + C-rich Low_complexity Low_complexity 6 76 0 180 200 75 0 chr17 47368667 47368707 -42135846 + MIR SINE MIR 104 146 -62 2274 72 0 3 chr17 47368714 47369007 -42135546 - AluSp SINE Alu -21 292 1 2327 48 10 0 chr17 47369007 47369296 -42135257 - AluSq SINE Alu -21 292 1 23 0 0 0 chr17 47369849 47369872 -42134681 + GC_rich Low_complexity Low_complexity 1 23 0 1642 103 45 51 chr17 47369892 47370184 -42134369 + AluJb SINE Alu 1 290 -22 21 0 0 0 chr17 47370369 47370390 -42134163 + GC_rich Low_complexity Low_complexity 1 21 0 204 274 0 27 chr17 47370556 47370629 -42133924 + G-rich Low_complexity Low_complexity 3 73 0 265 345 60 0 chr17 47371157 47371273 -42133280 + MIR SINE MIR 81 203 -59 2103 89 10 24 chr17 47371315 47371607 -42132946 + AluSc SINE Alu 1 288 -21 2048 139 0 0 chr17 47372032 47372333 -42132220 + AluSx SINE Alu 1 301 -11 1934 131 3 14 chr17 47372994 47373291 -42131262 - AluSx SINE Alu -18 294 1 290 250 120 30 chr17 47374262 47374362 -42130191 + MIR SINE MIR 55 163 -99 2153 103 0 0 chr17 47375855 47376146 -42128407 + AluSc SINE Alu 1 291 -18 210 204 56 19 chr17 47377288 47377342 -42127211 - L2 LINE L2 -3 3269 3214 567 216 131 13 chr17 47377402 47377555 -42126998 - L2 LINE L2 -1 3271 3101 222 267 111 0 chr17 47377934 47378024 -42126529 - MIR SINE MIR -106 156 57 1970 110 0 70 chr17 47378109 47378436 -42126117 + AluSx SINE Alu 1 304 -8 41 72 0 0 chr17 47379843 47379926 -42124627 + GC_rich Low_complexity Low_complexity 1 83 0 180 0 0 0 chr17 47381250 47381270 -42123283 + (TGG)n Simple_repeat Simple_repeat 3 22 0 2264 61 41 0 chr17 47381285 47381578 -42122975 + AluSp SINE Alu 1 305 -8 486 309 100 45 chr17 47383685 47383905 -42120648 - MIR SINE MIR -11 251 20 255 193 228 61 chr17 47384132 47384246 -42120307 + MIR SINE MIR 35 167 -95 338 327 87 14 chr17 47384915 47385123 -42119430 - MIR SINE MIR -20 242 20 195 100 0 0 chr17 47386880 47386910 -42117643 + (CCTCG)n Simple_repeat Simple_repeat 1 30 0 417 75 0 30 chr17 47388082 47388149 -42116404 - U6 snRNA snRNA -23 84 20 1986 108 36 0 chr17 47388326 47388636 -42115917 - AluSx SINE Alu 0 312 1 3553 157 9 66 chr17 47388637 47388930 -42115623 - L1MB3 LINE L1 -42 6141 5833 2169 113 10 0 chr17 47388930 47389239 -42115314 + AluSq SINE Alu 2 313 0 3553 157 9 66 chr17 47389239 47389333 -42115220 - L1MB3 LINE L1 -350 5833 5735 1923 166 66 56 chr17 47389333 47389377 -42115176 + MSTD LTR MaLR 1 43 -353 1823 160 0 26 chr17 47389377 47389683 -42114870 - AluSx SINE Alu -14 298 1 1578 176 0 77 chr17 47389683 47390006 -42114547 - AluJo SINE Alu -14 298 1 1923 166 66 56 chr17 47390006 47390352 -42114201 + MSTD LTR MaLR 42 396 0 3553 157 9 66 chr17 47390352 47390603 -42113950 - L1MB3 LINE L1 -448 5735 5551 2388 66 7 0 chr17 47390603 47390907 -42113646 - AluY SINE Alu -5 306 1 3553 157 9 66 chr17 47390907 47391039 -42113514 - L1MB3 LINE L1 -632 5551 5413 943 222 26 0 chr17 47391051 47391245 -42113308 - U3 snRNA snRNA 0 217 19 1216 175 0 5 chr17 47391263 47391469 -42113084 + AluJb SINE Alu 104 308 -4 2032 139 0 3 chr17 47391471 47391774 -42112779 + AluSx SINE Alu 1 302 -10 1784 207 9 78 chr17 47391794 47392422 -42112131 - L1MB3 LINE L1 -738 5442 4855 1855 92 36 0 chr17 47392422 47392671 -42111882 - AluSx SINE Alu -54 258 1 337 173 147 0 chr17 47392677 47392752 -42111801 + FRAM SINE Alu 75 160 -6 731 194 0 43 chr17 47392766 47392905 -42111648 + FLAM_A SINE Alu 1 133 0 1875 155 3 7 chr17 47392923 47393226 -42111327 + AluJb SINE Alu 1 302 -10 634 239 44 29 chr17 47393230 47393435 -42111118 - L1MB3 LINE L1 -1295 4851 4644 422 266 35 7 chr17 47393449 47393592 -42110961 - LTR50 LTR ERVL -646 149 3 1417 84 5 42 chr17 47394017 47394232 -42110321 - AluSq SINE Alu -106 207 1 2084 85 0 56 chr17 47394247 47394588 -42109965 - AluSg SINE Alu 0 324 1 489 299 45 19 chr17 47394625 47394923 -42109630 - ERVL LTR ERVL -523 5241 4870 1444 235 77 81 chr17 47394926 47395223 -42109330 + LTR16C LTR ERVL 1 298 -193 2189 92 3 0 chr17 47395223 47395553 -42109000 - AluSp SINE Alu 0 331 1 1444 235 77 81 chr17 47395553 47395747 -42108806 + LTR16C LTR ERVL 298 491 0 2249 321 92 54 chr17 47395748 47395995 -42108558 + HERV16 LTR ERVL 2 238 -5526 1929 138 3 3 chr17 47395995 47396293 -42108260 + AluSx SINE Alu 1 298 -14 2249 321 92 54 chr17 47396293 47396401 -42108152 + HERV16 LTR ERVL 238 340 -5424 1687 139 64 0 chr17 47396401 47396668 -42107885 + AluJb SINE Alu 14 297 -15 2249 321 92 54 chr17 47396668 47397228 -42107325 + HERV16 LTR ERVL 340 877 -4887 2050 113 0 10 chr17 47397228 47397529 -42107024 + AluSx SINE Alu 1 298 -14 2249 321 92 54 chr17 47397529 47397586 -42106967 + HERV16 LTR ERVL 877 930 -4834 2076 116 3 0 chr17 47397586 47397932 -42106621 - AluSx SINE Alu 0 312 1 2249 321 92 54 chr17 47397932 47398605 -42105948 + HERV16 LTR ERVL 930 1576 -4188 2262 86 3 3 chr17 47398605 47398907 -42105646 - AluSx SINE Alu 0 312 11 2249 321 92 54 chr17 47398907 47399311 -42105242 + HERV16 LTR ERVL 1576 1963 -3801 1458 184 17 10 chr17 47399311 47399599 -42104954 + AluJb SINE Alu 18 307 -5 2249 321 92 54 chr17 47399599 47399942 -42104611 + HERV16 LTR ERVL 1963 2292 -3472 2056 117 0 0 chr17 47399942 47400233 -42104320 + AluSx SINE Alu 2 292 -20 2249 321 92 54 chr17 47400233 47400850 -42103703 + HERV16 LTR ERVL 2292 2884 -2880 1972 113 28 0 chr17 47400850 47401134 -42103419 + AluSx SINE Alu 1 292 -20 2249 321 92 54 chr17 47401134 47401887 -42102666 + HERV16 LTR ERVL 2884 4117 -1647 1735 147 58 3 chr17 47401887 47402063 -42102490 - AluJo SINE Alu -1 311 111 378 0 0 0 chr17 47402063 47402105 -42102448 + (TG)n Simple_repeat Simple_repeat 1 42 0 1735 147 58 3 chr17 47402105 47402221 -42102332 - AluJo SINE Alu -201 111 3 620 131 0 0 chr17 47402221 47402305 -42102248 + AluY SINE Alu 209 292 -19 487 344 6 0 chr17 47402311 47402468 -42102085 + HERV16 LTR ERVL 4719 4876 -888 821 163 0 15 chr17 47402472 47402607 -42101946 - FLAM_C SINE Alu 0 133 1 867 228 0 0 chr17 47402629 47402787 -42101766 - FAM SINE Alu -17 158 1 671 314 28 43 chr17 47402863 47403188 -42101365 + HERV16 LTR ERVL 4914 5233 -531 2733 137 21 27 chr17 47403197 47403408 -42101145 + L1MB7 LINE L1 5703 5914 -270 2183 104 3 0 chr17 47403408 47403707 -42100846 - AluSq SINE Alu -13 300 1 2733 137 21 27 chr17 47403707 47403971 -42100582 + L1MB7 LINE L1 5914 6175 -9 288 211 14 0 chr17 47403974 47404045 -42100508 - L1MEc LINE L1 -4410 1986 1915 1970 129 10 0 chr17 47404103 47404398 -42100155 + 7SLRNA srpRNA srpRNA 1 298 -22 2346 76 0 10 chr17 47404398 47404702 -42099851 + AluY SINE Alu 1 301 -10 443 220 5 170 chr17 47404731 47404885 -42099668 - L1M4 LINE L1 -760 5386 5279 1563 148 59 7 chr17 47404885 47405155 -42099398 - AluJo SINE Alu -22 290 7 443 220 5 170 chr17 47405155 47405223 -42099330 - L1M4 LINE L1 -867 5279 5201 728 239 0 0 chr17 47405236 47405414 -42099139 - FLAM_A SINE Alu 0 178 1 1304 85 44 114 chr17 47405415 47405570 -42098983 + Tigger7 DNA MER2_type 2240 2370 -121 1933 90 76 17 chr17 47405570 47405858 -42098695 + AluSx SINE Alu 1 305 -7 1304 85 44 114 chr17 47405858 47405973 -42098580 + Tigger7 DNA MER2_type 2370 2491 0 188 119 0 119 chr17 47406077 47406095 -42098458 - L2 LINE L2 -7 3306 3294 2090 97 17 0 chr17 47406095 47406385 -42098168 + AluSq SINE Alu 1 295 -18 188 119 0 119 chr17 47406385 47406408 -42098145 - L2 LINE L2 -19 3294 3270 208 238 62 38 chr17 47406601 47406681 -42097872 - L2 LINE L2 -856 2458 2377 828 136 25 6 chr17 47406901 47407153 -42097400 + AluJ SINE Alu 1 296 -16 2139 129 0 0 chr17 47407751 47408054 -42096499 + AluSx SINE Alu 1 303 -9 922 261 8 39 chr17 47408094 47408351 -42096202 - MIR SINE MIR 0 262 14 2116 112 0 3 chr17 47408406 47408700 -42095853 - AluSg SINE Alu -15 295 3 1623 113 3 103 chr17 47408703 47409038 -42095515 - AluY SINE Alu 0 304 1 2080 125 0 7 chr17 47409043 47409347 -42095206 - AluJb SINE Alu -10 302 1 2003 134 3 0 chr17 47409456 47409762 -42094791 - AluSc SINE Alu 0 309 3 854 153 15 0 chr17 47409767 47409904 -42094649 - AluSq/x SINE Alu -172 141 3 229 235 40 101 chr17 47410161 47410209 -42094344 - L1MC5 LINE L1 -1130 6831 6782 1752 139 7 45 chr17 47410209 47410376 -42094177 - AluJb SINE Alu -12 300 149 2281 89 0 0 chr17 47410376 47410668 -42093885 - AluSc SINE Alu -17 292 1 1752 139 7 45 chr17 47410668 47410810 -42093743 - AluJb SINE Alu -163 149 3 229 235 40 101 chr17 47410810 47410910 -42093643 - L1MC5 LINE L1 -1179 6782 6692 287 158 0 134 chr17 47411373 47411455 -42093098 + L2 LINE L2 3196 3266 -6 2012 121 3 13 chr17 47411843 47412157 -42092396 + AluSx SINE Alu 1 311 -1 1769 156 20 0 chr17 47412166 47412461 -42092092 + AluJo SINE Alu 5 305 -7 280 356 32 21 chr17 47412887 47413009 -42091544 - MIR SINE MIR 0 262 136 2232 94 0 3 chr17 47413009 47413307 -42091246 - AluSx SINE Alu -15 297 1 280 356 32 21 chr17 47413307 47413372 -42091181 - MIR SINE MIR -126 136 73 315 0 0 0 chr17 47414027 47414062 -42090491 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2024 113 0 7 chr17 47414064 47414347 -42090206 - AluSx SINE Alu -31 281 1 375 203 13 0 chr17 47415537 47415616 -42088937 + MIR SINE MIR 52 131 -131 1996 154 3 0 chr17 47415806 47416117 -42088436 - AluSq SINE Alu -1 312 1 973 36 0 93 chr17 47416129 47416268 -42088285 - L1MA1 LINE L1 0 6302 6177 1968 128 0 20 chr17 47416301 47416605 -42087948 - AluJb SINE Alu -14 298 1 934 95 0 29 chr17 47417599 47417736 -42086817 - FLAM_C SINE Alu 0 133 1 422 257 82 37 chr17 47417799 47417987 -42086566 + MIR SINE MIR 16 206 -56 * 461 271 39 32 chr17 47417971 47418126 -42086427 - L2 LINE L2 -2 3311 3156 2149 100 0 0 chr17 47418135 47418532 -42086021 + AluSg SINE Alu 1 397 0 945 210 120 43 chr17 47418584 47418779 -42085774 + MLT1J LTR MaLR 3 220 -291 2147 104 3 10 chr17 47418779 47418914 -42085639 + AluSp SINE Alu 1 135 -178 2270 98 0 3 chr17 47418914 47419219 -42085334 + AluSg SINE Alu 1 304 -6 2147 104 3 10 chr17 47419219 47419390 -42085163 + AluSp SINE Alu 135 305 -8 945 210 120 43 chr17 47419390 47419427 -42085126 + MLT1J LTR MaLR 220 253 -258 865 110 0 0 chr17 47419465 47419583 -42084970 - FLAM_C SINE Alu -25 118 1 327 180 0 0 chr17 47419584 47419645 -42084908 + MLT1J LTR MaLR 429 489 -22 313 264 44 0 chr17 47419717 47419808 -42084745 - L2 LINE L2 -264 3049 2955 614 281 85 27 chr17 47419875 47420203 -42084350 - L2 LINE L2 -548 2766 2420 1982 152 0 0 chr17 47420315 47420612 -42083941 - AluSx SINE Alu -15 297 1 872 137 0 0 chr17 47420666 47420790 -42083763 - AluJb SINE Alu -187 125 2 212 364 82 62 chr17 47420814 47421155 -42083398 - L2 LINE L2 -1 3271 2924 1742 159 3 17 chr17 47421338 47421634 -42082919 - AluSx SINE Alu -10 302 11 1591 157 20 56 chr17 47421641 47421947 -42082606 - AluJo SINE Alu -11 301 7 193 289 0 0 chr17 47422234 47422279 -42082274 + L3b LINE CR1 1519 1563 -20 184 259 19 0 chr17 47422724 47422778 -42081775 - MIR SINE MIR -72 136 82 2000 146 10 0 chr17 47423439 47423792 -42080761 + AluJb SINE Alu 1 356 0 2131 117 20 0 chr17 47424375 47424674 -42079879 + AluSx SINE Alu 1 305 -7 2262 95 20 0 chr17 47424674 47424980 -42079573 + AluSq SINE Alu 1 312 -1 225 399 46 32 chr17 47425522 47425740 -42078813 + MIR SINE MIR 21 241 -21 196 175 0 0 chr17 47425769 47425809 -42078744 + MIR SINE MIR 106 145 -117 436 287 9 0 chr17 47426047 47426162 -42078391 - MIR3 SINE MIR -40 168 53 1136 215 50 12 chr17 47427807 47428049 -42076504 - MIR SINE MIR 0 262 12 438 294 62 25 chr17 47428088 47428248 -42076305 + MIR SINE MIR 7 172 -90 322 229 195 24 chr17 47428676 47428829 -42075724 - MIR SINE MIR -61 147 7 200 244 0 81 chr17 47428948 47429034 -42075519 + GA-rich Low_complexity Low_complexity 2 80 0 1722 68 5 0 chr17 47429251 47429470 -42075083 - AluSg/x SINE Alu -6 304 85 2364 61 0 7 chr17 47429584 47429881 -42074672 + AluY SINE Alu 1 295 -16 190 245 184 0 chr17 47430281 47430330 -42074223 + L2 LINE L2 3247 3304 -9 408 335 7 26 chr17 47430602 47430757 -42073796 - L2 LINE L2 -3 3310 3159 1840 171 16 0 chr17 47430772 47431077 -42073476 - AluJb SINE Alu -2 310 1 867 206 53 0 chr17 47431089 47431259 -42073294 + FRAM SINE Alu 1 171 -5 976 191 32 64 chr17 47431277 47431497 -42073056 + AluJo SINE Alu 99 311 -1 424 92 13 13 chr17 47431497 47431573 -42072980 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 540 276 87 5 chr17 47431606 47431868 -42072685 - L2 LINE L2 -254 3059 2777 425 309 0 7 chr17 47436257 47436393 -42068160 + (GTCTG)n Simple_repeat Simple_repeat 1 135 0 2207 117 0 0 chr17 47437963 47438263 -42066290 + AluSx SINE Alu 1 300 -12 839 155 32 0 chr17 47439036 47439321 -42065232 + (TGGA)n Simple_repeat Simple_repeat 1 294 0 552 269 26 6 chr17 47440296 47440452 -42064101 + MIR SINE MIR 31 189 -73 808 188 40 51 chr17 47440905 47440979 -42063574 - MER69A DNA AcHobo -2349 177 104 2374 79 0 3 chr17 47440979 47441284 -42063269 + AluSq SINE Alu 1 304 -9 2118 126 17 0 chr17 47441286 47441587 -42062966 + AluSg SINE Alu 2 307 -3 808 188 40 51 chr17 47441587 47441685 -42062868 - MER69A DNA AcHobo -2423 103 4 367 286 129 14 chr17 47442403 47442550 -42062003 + MIR3 SINE MIR 36 199 -9 448 217 133 0 chr17 47442783 47442903 -42061650 + MIR SINE MIR 16 151 -111 1989 95 81 0 chr17 47442924 47443209 -42061344 + AluSg SINE Alu 1 308 -2 1672 167 0 27 chr17 47443240 47443533 -42061020 + AluJb SINE Alu 28 312 0 294 310 56 20 chr17 47444166 47444312 -42060241 + MIR SINE MIR 11 158 -68 542 194 54 31 chr17 47445153 47445282 -42059271 + MIR SINE MIR 75 206 -56 299 194 19 126 chr17 47445338 47445442 -42059111 - MIR SINE MIR -107 101 10 228 61 0 0 chr17 47445642 47445675 -42058878 - L2 LINE L2 0 3272 3240 2314 103 0 6 chr17 47446093 47446405 -42058148 + AluSx SINE Alu 1 310 -2 502 206 0 7 chr17 47446557 47446672 -42057881 + MIR SINE MIR 102 214 -48 259 225 14 28 chr17 47447741 47447812 -42056741 + MIR SINE MIR 61 130 -78 344 304 184 0 chr17 47448055 47448180 -42056373 + MER5A DNA MER1_type 11 158 -31 411 38 0 0 chr17 47448538 47448591 -42055962 + (CA)n Simple_repeat Simple_repeat 2 54 0 2227 94 3 0 chr17 47448612 47448919 -42055634 - AluSq SINE Alu -5 308 1 376 328 27 59 chr17 47449040 47449226 -42055327 + L1MC4a LINE L1 5649 5828 -1980 630 178 0 0 chr17 47449301 47449408 -42055145 - FLAM_C SINE Alu -3 140 34 333 344 66 0 chr17 47449408 47449559 -42054994 + MIR SINE MIR 62 222 -40 2389 87 3 0 chr17 47449826 47450136 -42054417 - AluY SINE Alu 0 311 1 2121 117 0 16 chr17 47450137 47450454 -42054099 - AluSx SINE Alu 0 312 1 22 35 0 0 chr17 47450581 47450610 -42053943 + AT_rich Low_complexity Low_complexity 1 29 0 764 159 56 87 chr17 47450649 47450823 -42053730 + AluJo SINE Alu 123 292 -20 1845 117 37 17 chr17 47450823 47450959 -42053594 + AluSx SINE Alu 1 133 -179 2358 67 3 3 chr17 47450959 47451256 -42053297 + AluSc SINE Alu 1 297 -12 1845 117 37 17 chr17 47451256 47451418 -42053135 + AluSx SINE Alu 133 305 -7 764 159 56 87 chr17 47451418 47451438 -42053115 + AluJo SINE Alu 292 311 -1 487 272 89 73 chr17 47451491 47451569 -42052984 - L1MC5 LINE L1 -142 7819 7744 2415 69 10 0 chr17 47451569 47451875 -42052678 - AluY SINE Alu -2 309 1 487 272 89 73 chr17 47451875 47452123 -42052430 - L1MC5 LINE L1 -217 7744 7488 1986 134 23 3 chr17 47452128 47452434 -42052119 - AluJb SINE Alu 0 312 1 826 110 0 55 chr17 47452434 47452580 -42051973 - MSTC LTR MaLR -221 207 70 2159 82 6 55 chr17 47452581 47452714 -42051839 + AluSp SINE Alu 1 139 -174 2216 54 0 50 chr17 47452714 47453038 -42051515 + AluY SINE Alu 1 309 0 2159 82 6 55 chr17 47453038 47453231 -42051322 + AluSp SINE Alu 139 312 -1 2315 75 7 0 chr17 47453244 47453536 -42051017 + AluSq SINE Alu 3 296 -17 539 308 53 35 chr17 47453657 47453975 -42050578 - MLT1I LTR MaLR -8 401 78 2092 112 13 13 chr17 47454161 47454464 -42050089 - AluSx SINE Alu -9 303 1 1751 157 7 27 chr17 47454584 47454884 -42049669 - AluJb SINE Alu -8 304 11 499 172 178 78 chr17 47455189 47455369 -42049184 - MSTC LTR MaLR -142 286 89 2147 78 0 0 chr17 47455369 47455640 -42048913 - AluSg SINE Alu -39 271 1 329 0 24 0 chr17 47455653 47455694 -42048859 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 6204 65 24 63 chr17 47455694 47456993 -42047560 - SVA Other Other -551 1363 433 5933 70 30 6 chr17 47457018 47457860 -42046693 - SVA Other Other -520 866 5 2112 111 9 25 chr17 47457888 47458203 -42046350 - AluSq SINE Alu -3 310 1 995 224 33 20 chr17 47458538 47458783 -42045770 - MIR SINE MIR -9 253 6 2157 92 0 17 chr17 47458868 47459163 -42045390 + AluSq SINE Alu 7 296 -17 1802 142 13 13 chr17 47459606 47459908 -42044645 + AluJb SINE Alu 1 302 -10 289 244 11 22 chr17 47459948 47460038 -42044515 - L2 LINE L2 -215 3057 2969 488 237 100 63 chr17 47460409 47460494 -42044059 - L1ME4a LINE L1 -4 6117 6037 1854 164 3 6 chr17 47460494 47460805 -42043748 + AluJo SINE Alu 1 310 -2 488 237 100 63 chr17 47460805 47460882 -42043671 - L1ME4a LINE L1 -84 6037 5945 2053 133 0 7 chr17 47460882 47461191 -42043362 - AluJb SINE Alu -5 307 1 488 237 100 63 chr17 47461191 47461217 -42043336 - L1ME4a LINE L1 -176 5945 5921 1688 178 0 20 chr17 47461239 47461543 -42043010 - AluJo SINE Alu -14 298 1 2025 209 19 34 chr17 47461559 47461950 -42042603 + L1M4 LINE L1 2464 2845 -3301 2232 99 0 10 chr17 47461950 47462253 -42042300 - AluSx SINE Alu -12 300 1 2025 209 19 34 chr17 47462253 47462445 -42042108 + L1M4 LINE L1 2845 3038 -3108 510 176 0 0 chr17 47462445 47462530 -42042023 + AluS SINE Alu 1 85 -227 303 93 0 0 chr17 47462538 47462581 -42041972 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1065 223 24 26 chr17 47462582 47462712 -42041841 + L1M4 LINE L1 3028 3157 -2989 1928 146 14 0 chr17 47462712 47463007 -42041546 + AluSx SINE Alu 1 299 -13 1065 223 24 26 chr17 47463007 47463257 -42041296 + L1M4 LINE L1 3157 3407 -2739 2058 110 34 0 chr17 47463260 47463551 -42041002 + AluSq SINE Alu 1 301 -12 23 33 0 0 chr17 47463551 47463581 -42040972 + AT_rich Low_complexity Low_complexity 1 30 0 2005 149 0 7 chr17 47463632 47463941 -42040612 - AluJo SINE Alu -5 307 1 686 151 101 0 chr17 47464014 47464133 -42040420 + FLAM_C SINE Alu 3 133 0 1496 180 37 15 chr17 47464133 47464314 -42040239 + L1MCa LINE L1 6 199 -6227 1783 157 28 0 chr17 47464314 47464601 -42039952 - AluJo SINE Alu -17 295 1 1496 180 37 15 chr17 47464601 47464746 -42039807 + L1MCa LINE L1 199 339 -6087 2094 75 11 0 chr17 47466127 47466394 -42038159 + AluY SINE Alu 27 296 -15 2186 120 3 0 chr17 47466961 47467260 -42037293 + AluSx SINE Alu 2 301 -11 291 260 26 0 chr17 47468311 47468388 -42036165 + L1MCa LINE L1 316 394 -6032 2265 96 3 0 chr17 47468454 47468756 -42035797 - AluSx SINE Alu -4 308 6 557 175 63 0 chr17 47468762 47468888 -42035665 + MER3 DNA MER1_type 33 166 -43 1881 125 0 69 chr17 47468889 47469206 -42035347 + AluSx SINE Alu 1 295 -17 2377 74 10 0 chr17 47469206 47469516 -42035037 + AluSp SINE Alu 1 313 0 272 212 15 0 chr17 47469520 47469586 -42034967 + FLAM SINE Alu 67 133 0 391 221 35 50 chr17 47469587 47469726 -42034827 + L1ME3 LINE L1 5758 5898 -264 2316 80 0 29 chr17 47469726 47470039 -42034514 + AluY SINE Alu 2 305 -6 391 221 35 50 chr17 47470039 47470107 -42034446 + L1ME3 LINE L1 5898 6093 -69 2053 129 7 0 chr17 47470156 47470465 -42034088 + AluSx SINE Alu 2 312 0 1175 96 19 0 chr17 47470465 47470622 -42033931 + AluSp SINE Alu 134 293 -20 2418 73 3 0 chr17 47470692 47470993 -42033560 + AluSp SINE Alu 1 302 -11 291 316 28 85 chr17 47471744 47471921 -42032632 - MIR SINE MIR -56 206 40 183 80 0 0 chr17 47471963 47471988 -42032565 + (T)n Simple_repeat Simple_repeat 1 25 0 731 173 0 39 chr17 47472015 47472142 -42032411 - FLAM_C SINE Alu -21 122 1 621 189 15 117 chr17 47472199 47472395 -42032158 - MER69A DNA AcHobo 0 177 2 23 0 0 0 chr17 47474141 47474164 -42030389 + AT_rich Low_complexity Low_complexity 1 23 0 217 0 0 57 chr17 47474315 47474350 -42030203 + (CGGG)n Simple_repeat Simple_repeat 3 35 0 332 286 29 0 chr17 47475147 47475176 -42029377 + C-rich Low_complexity Low_complexity 6 33 -116 192 77 0 0 chr17 47475176 47475202 -42029351 + (CAG)n Simple_repeat Simple_repeat 3 28 0 332 286 29 0 chr17 47475202 47475312 -42029241 + C-rich Low_complexity Low_complexity 33 149 0 206 140 0 40 chr17 47475430 47475480 -42029073 + (CCCCCT)n Simple_repeat Simple_repeat 3 50 0 24 0 0 0 chr17 47475527 47475551 -42029002 + GC_rich Low_complexity Low_complexity 1 24 0 284 119 17 0 chr17 47475617 47475676 -42028877 + (CCG)n Simple_repeat Simple_repeat 2 61 0 27 81 0 0 chr17 47476056 47476118 -42028435 + GC_rich Low_complexity Low_complexity 1 62 0 224 213 0 16 chr17 47476148 47476209 -42028344 + G-rich Low_complexity Low_complexity 1 60 0 341 309 100 17 chr17 47479951 47480120 -42024433 - MIR SINE MIR -67 141 17 378 297 97 34 chr17 47480766 47480941 -42023612 + MIR3 SINE MIR 6 191 -17 191 299 67 52 chr17 47480976 47481110 -42023443 + MIR3 SINE MIR 58 193 -15 245 333 0 45 chr17 47481173 47481350 -42023203 + GA-rich Low_complexity Low_complexity 3 171 0 264 314 51 22 chr17 47481654 47481791 -42022762 + MIR3 SINE MIR 58 198 -10 267 310 76 41 chr17 47485223 47485394 -42019159 + MIR SINE MIR 84 260 -2 469 237 33 53 chr17 47486001 47486059 -42018494 - MIR SINE MIR -60 202 144 1891 126 61 0 chr17 47486059 47486352 -42018201 - AluSx SINE Alu -1 311 1 469 237 33 53 chr17 47486352 47486445 -42018108 - MIR SINE MIR -118 144 54 1976 131 3 10 chr17 47486856 47487162 -42017391 + AluJb SINE Alu 7 310 -2 184 323 11 43 chr17 47487212 47487305 -42017248 + MIR SINE MIR 167 256 -6 189 196 0 0 chr17 47487663 47487719 -42016834 + GA-rich Low_complexity Low_complexity 2 57 0 180 158 0 0 chr17 47487896 47487934 -42016619 + (CGA)n Simple_repeat Simple_repeat 2 39 0 183 42 0 0 chr17 47488817 47488841 -42015712 + (TG)n Simple_repeat Simple_repeat 2 25 0 848 267 205 38 chr17 47491178 47491911 -42012642 + L2 LINE L2 2432 3313 0 337 277 254 26 chr17 47491916 47492294 -42012259 + L2 LINE L2 2791 3265 -7 1696 128 55 18 chr17 47492831 47493128 -42011425 + AluSx SINE Alu 2 308 0 1447 67 164 127 chr17 47493419 47493718 -42010835 - AluSg SINE Alu 0 310 1 436 261 109 0 chr17 47493912 47494050 -42010503 - MIR SINE MIR 0 262 110 181 194 15 30 chr17 47495230 47495297 -42009256 + GA-rich Low_complexity Low_complexity 3 68 0 257 252 16 49 chr17 47495450 47495573 -42008980 + (CGGGG)n Simple_repeat Simple_repeat 5 123 0 35 54 0 0 chr17 47495589 47495645 -42008908 + GC_rich Low_complexity Low_complexity 1 56 0 31 0 0 0 chr17 47495729 47495760 -42008793 + GC_rich Low_complexity Low_complexity 1 31 0 279 221 15 0 chr17 47495767 47495835 -42008718 + G-rich Low_complexity Low_complexity 3 71 0 24 53 0 0 chr17 47495967 47496005 -42008548 + GC_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr17 47496143 47496169 -42008384 + GC_rich Low_complexity Low_complexity 1 26 0 2336 88 0 0 chr17 47498449 47498757 -42005796 - AluSg SINE Alu -2 308 1 2410 67 0 19 chr17 47504876 47505190 -41999363 - AluSc SINE Alu -1 308 1 2144 80 42 0 chr17 47505225 47505512 -41999041 - AluSg SINE Alu -11 299 1 684 298 35 35 chr17 47507362 47507617 -41996936 + MIR SINE MIR 8 262 0 269 317 13 80 chr17 47507567 47507791 -41996762 - MIR SINE MIR -33 229 21 * 2277 50 7 13 chr17 47508919 47509217 -41995336 - AluSp SINE Alu -17 296 1 806 170 44 6 chr17 47509247 47509406 -41995147 + FRAM SINE Alu 1 163 -13 813 235 43 21 chr17 47509430 47509552 -41995001 - L1ME3A LINE L1 -5 6165 6047 2230 100 0 0 chr17 47509552 47509851 -41994702 + AluSg SINE Alu 6 304 -6 813 235 43 21 chr17 47509851 47510009 -41994544 - L1ME3A LINE L1 -123 6047 5879 477 56 0 185 chr17 47510020 47510044 -41994509 - L1MB4 LINE L1 -2 6178 6151 705 198 0 8 chr17 47510044 47510170 -41994383 + FLAM_A SINE Alu 1 125 -8 477 56 0 185 chr17 47510170 47510253 -41994300 - L1MB4 LINE L1 -29 6151 6091 1424 147 34 4 chr17 47510254 47510492 -41994061 + AluJb SINE Alu 1 245 -67 756 193 15 0 chr17 47510492 47510627 -41993926 + AluJo/FRAM SINE Alu 175 311 -1 1673 186 7 0 chr17 47510635 47510931 -41993622 + AluJo SINE Alu 1 298 -14 2086 104 17 0 chr17 47511188 47511485 -41993068 - AluSx SINE Alu -10 302 1 1009 104 0 0 chr17 47511485 47511619 -41992934 - AluSq/x SINE Alu -176 136 3 1608 139 6 101 chr17 47512128 47512473 -41992080 - AluJo SINE Alu 0 312 1 785 180 72 0 chr17 47512509 47512648 -41991905 + AluJb SINE Alu 143 291 -21 599 152 19 9 chr17 47512648 47512753 -41991800 - FLAM_A SINE Alu -19 123 18 375 375 7 14 chr17 47513213 47513357 -41991196 - L2 LINE L2 -216 3056 2914 1165 168 0 0 chr17 47513478 47513669 -41990884 - AluSp SINE Alu -2 311 121 4012 76 9 76 chr17 47513678 47514414 -41990139 - SVA Other Other -267 1119 433 1225 73 0 57 chr17 47514432 47514678 -41989875 - SVA Other Other -520 866 635 2643 86 38 90 chr17 47514709 47515209 -41989344 - SVA Other Other -520 866 393 21 36 0 0 chr17 47515260 47515288 -41989265 + GC_rich Low_complexity Low_complexity 1 28 0 2346 86 0 7 chr17 47515585 47515887 -41988666 - AluSg SINE Alu -10 300 1 1019 105 0 0 chr17 47515891 47516024 -41988529 - AluSq/x SINE Alu -180 133 1 1993 130 14 0 chr17 47516488 47516781 -41987772 + AluSx SINE Alu 3 299 -13 222 236 73 91 chr17 47517211 47517321 -41987232 + L2 LINE L2 3152 3259 -13 313 250 102 31 chr17 47518668 47518796 -41985757 - MIR3 SINE MIR -22 186 50 1925 125 10 16 chr17 47518879 47519182 -41985371 - AluJb SINE Alu -11 301 1 191 88 29 0 chr17 47519407 47519441 -41985112 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 2369 68 0 10 chr17 47519825 47520133 -41984420 - AluY SINE Alu -2 309 5 2120 111 0 3 chr17 47520135 47520433 -41984120 - AluSc SINE Alu -12 297 1 1623 139 0 66 chr17 47520770 47520910 -41983643 + AluJo SINE Alu 13 124 -188 2430 42 0 19 chr17 47520910 47521217 -41983336 + AluY SINE Alu 1 301 -10 1623 139 0 66 chr17 47521217 47521377 -41983176 + AluJo SINE Alu 124 293 -19 1419 170 62 11 chr17 47521433 47521709 -41982844 - AluJo SINE Alu -22 290 1 729 197 0 15 chr17 47521711 47521843 -41982710 - AluJo/FLAM SINE Alu -181 131 2 2053 94 3 20 chr17 47521850 47522148 -41982405 - AluSg SINE Alu -17 293 1 923 118 106 6 chr17 47522148 47522309 -41982244 - AluSg/x SINE Alu -7 305 129 2006 121 31 0 chr17 47522338 47522627 -41981926 + AluSx SINE Alu 1 298 -14 360 191 0 48 chr17 47522708 47522792 -41981761 + MIR SINE MIR 66 145 -117 770 120 0 0 chr17 47523562 47523670 -41980883 + AluJo/FLAM SINE Alu 2 109 -203 2147 106 3 0 chr17 47523670 47523971 -41980582 - AluSg SINE Alu -8 302 1 239 236 0 18 chr17 47524096 47524151 -41980402 + CT-rich Low_complexity Low_complexity 2 55 0 363 274 48 24 chr17 47525151 47525275 -41979278 - MIR SINE MIR -77 185 59 827 149 0 57 chr17 47525298 47525411 -41979142 + AluJo/FLAM SINE Alu 1 106 -196 2248 89 0 22 chr17 47525411 47525724 -41978829 - AluSg SINE Alu -4 306 1 827 149 0 57 chr17 47525724 47525751 -41978802 + AluJo/FLAM SINE Alu 106 133 -169 1602 130 45 41 chr17 47525860 47526021 -41978532 - AluSx SINE Alu -18 294 130 2447 54 0 19 chr17 47526021 47526334 -41978219 - AluY SINE Alu -4 307 1 1602 130 45 41 chr17 47526334 47526464 -41978089 - AluSx SINE Alu -182 130 2 475 200 0 0 chr17 47527111 47527196 -41977357 - AluJ/FLAM SINE Alu -226 86 2 825 180 0 0 chr17 47528303 47528431 -41976122 - FLAM_A SINE Alu -5 128 1 1574 174 10 26 chr17 47528699 47529010 -41975543 + AluJo SINE Alu 5 310 -2 809 193 0 0 chr17 47529163 47529303 -41975250 - FLAM_C SINE Alu -2 141 2 2381 70 3 0 chr17 47529502 47529803 -41974750 - AluY SINE Alu -9 302 1 674 133 89 0 chr17 47529810 47529945 -41974608 + L1MC3 LINE L1 6943 7089 -696 2386 69 3 0 chr17 47529948 47530251 -41974302 + AluY SINE Alu 2 305 -6 331 273 0 0 chr17 47530259 47530336 -41974217 + MLT1F1 LTR MaLR 35 111 -456 755 237 221 0 chr17 47530343 47530767 -41973786 + L1MC3 LINE L1 7397 7724 -243 1598 119 32 54 chr17 47530767 47530879 -41973674 + AluJo SINE Alu 18 131 -181 2541 61 0 0 chr17 47530879 47531190 -41973363 + AluY SINE Alu 1 311 0 1598 119 32 54 chr17 47531190 47531355 -41973198 + AluJo SINE Alu 131 289 -23 1733 96 50 53 chr17 47531357 47531492 -41973061 + AluSx SINE Alu 2 136 -176 2223 104 0 0 chr17 47531492 47531790 -41972763 + AluSq SINE Alu 1 298 -15 1733 96 50 53 chr17 47531790 47531850 -41972703 + AluSx SINE Alu 136 195 -117 2317 63 0 23 chr17 47531850 47532150 -41972403 - AluSg SINE Alu -17 293 1 1733 96 50 53 chr17 47532150 47532256 -41972297 + AluSx SINE Alu 195 303 -9 755 237 221 0 chr17 47532256 47532342 -41972211 + L1MC3 LINE L1 7724 7789 -178 2142 76 0 33 chr17 47532342 47532643 -41971910 + AluY SINE Alu 1 291 -20 755 237 221 0 chr17 47532643 47532671 -41971882 + L1MC3 LINE L1 7789 7967 0 214 374 73 0 chr17 47533667 47533790 -41970763 - MIR3 SINE MIR -4 204 73 2392 67 0 3 chr17 47534037 47534334 -41970219 - AluY SINE Alu -15 296 1 4937 175 51 40 chr17 47534547 47534673 -41969880 + LTR13 LTR ERVK 1 124 -883 2349 57 3 7 chr17 47534673 47534969 -41969584 - AluY SINE Alu -16 295 1 4937 175 51 40 chr17 47534969 47535838 -41968715 + LTR13 LTR ERVK 124 1007 0 1090 159 95 20 chr17 47535849 47536101 -41968452 - LTR13 LTR ERVK -736 271 1 1666 161 9 38 chr17 47536165 47536308 -41968245 + AluJb SINE Alu 1 147 -165 2448 47 0 7 chr17 47536308 47536606 -41967947 + AluY SINE Alu 1 296 -15 1666 161 9 38 chr17 47536606 47536778 -41967775 + AluJb SINE Alu 147 307 -5 2252 102 0 3 chr17 47537540 47537853 -41966700 + AluSx SINE Alu 1 312 0 986 118 0 0 chr17 47538157 47538292 -41966261 + AluSq/x SINE Alu 1 135 -177 2095 117 3 3 chr17 47538293 47538593 -41965960 + AluSg SINE Alu 1 300 -10 1859 128 60 13 chr17 47538731 47539029 -41965524 + AluSx SINE Alu 1 312 0 225 230 135 0 chr17 47539143 47539217 -41965336 - MIR3 SINE MIR -40 168 85 2171 80 24 0 chr17 47540904 47541193 -41963360 - AluSg SINE Alu -14 296 1 2101 99 10 0 chr17 47541195 47541487 -41963066 - AluSx SINE Alu -17 295 1 2022 107 35 0 chr17 47541494 47541783 -41962770 - AluSp SINE Alu -14 299 1 1669 146 3 43 chr17 47541788 47542089 -41962464 - AluJo SINE Alu -22 290 2 198 103 0 0 chr17 47542798 47542827 -41961726 + (T)n Simple_repeat Simple_repeat 1 29 0 1083 74 0 0 chr17 47542975 47543110 -41961443 + AluSq/x SINE Alu 1 135 -177 2078 92 0 4 chr17 47543110 47543454 -41961099 + AluSc SINE Alu 1 343 0 2276 102 0 3 chr17 47544564 47544877 -41959676 + AluSx SINE Alu 1 312 0 321 271 62 35 chr17 47545396 47545540 -41959013 + L2 LINE L2 3147 3294 -19 622 220 25 0 chr17 47545562 47545680 -41958873 + FLAM_A SINE Alu 12 132 -10 2242 119 0 0 chr17 47545706 47546018 -41958535 + AluSx SINE Alu 1 312 0 2171 116 6 3 chr17 47547519 47547830 -41956723 + AluSx SINE Alu 1 312 0 186 43 0 0 chr17 47548183 47548206 -41956347 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 194 0 0 37 chr17 47548205 47548232 -41956321 + (CA)n Simple_repeat Simple_repeat 1 26 0 1948 148 0 0 chr17 47548905 47549202 -41955351 + AluJb SINE Alu 1 297 -15 1298 81 92 0 chr17 47549205 47549390 -41955163 + L1PA11 LINE L1 5973 6174 0 329 259 25 0 chr17 47549393 47549474 -41955079 - MER5B DNA MER1_type -48 130 48 336 237 149 18 chr17 47549556 47549670 -41954883 - MIR SINE MIR -61 147 19 1987 80 94 0 chr17 47550239 47550515 -41954038 + AluSx SINE Alu 1 302 -10 729 191 8 0 chr17 47550541 47550672 -41953881 + FLAM_A SINE Alu 1 132 -1 2068 130 0 16 chr17 47550680 47550814 -41953739 + AluSx SINE Alu 2 137 -175 2103 98 3 10 chr17 47550814 47551110 -41953443 + AluSg SINE Alu 1 294 -16 2068 130 0 16 chr17 47551110 47551290 -41953263 + AluSx SINE Alu 137 311 -1 1748 158 7 20 chr17 47551416 47551587 -41952966 - AluJo SINE Alu -8 304 137 2118 112 3 10 chr17 47551587 47551891 -41952662 - AluSg SINE Alu -6 304 3 1748 158 7 20 chr17 47551891 47552016 -41952537 - AluJo SINE Alu -175 137 12 1990 125 3 7 chr17 47552017 47552321 -41952232 + AluSx SINE Alu 1 303 -9 678 99 10 0 chr17 47552694 47552795 -41951758 + AluSg/x SINE Alu 205 306 -4 265 286 33 0 chr17 47552894 47552985 -41951568 - MIR SINE MIR -79 129 36 1238 90 0 17 chr17 47553539 47553717 -41950836 - AluSg/x SINE Alu -1 311 137 1706 166 3 49 chr17 47553812 47553975 -41950578 - AluSg SINE Alu -6 294 150 2195 74 3 45 chr17 47553975 47554137 -41950416 - AluSq SINE Alu -17 296 152 2288 89 7 0 chr17 47554137 47554441 -41950112 - AluSx SINE Alu -6 306 1 2195 74 3 45 chr17 47554441 47554587 -41949966 - AluSq SINE Alu -161 152 1 1706 166 3 49 chr17 47554587 47554731 -41949822 - AluSg SINE Alu -150 150 1 307 125 0 94 chr17 47554734 47554798 -41949755 - AluJo SINE Alu -159 143 86 2346 61 0 3 chr17 47554875 47555169 -41949384 + AluY SINE Alu 8 300 -11 1183 124 6 0 chr17 47555169 47555346 -41949207 + AluSq SINE Alu 134 311 -2 2419 57 0 0 chr17 47555356 47555655 -41948898 + AluY SINE Alu 1 299 -12 370 263 20 10 chr17 47555658 47555757 -41948796 + MIR SINE MIR 157 256 -6 2066 129 3 3 chr17 47555866 47556175 -41948378 - AluSx SINE Alu -3 309 1 976 189 0 0 chr17 47556472 47556647 -41947906 + MER3 DNA MER1_type 1 128 -81 210 250 0 0 chr17 47556761 47556805 -41947748 + (TG)n Simple_repeat Simple_repeat 1 44 0 421 262 0 41 chr17 47557668 47557790 -41946763 + L1ME4a LINE L1 5590 5706 -415 1776 93 116 4 chr17 47557792 47558060 -41946493 + AluSg1 SINE Alu 1 298 -11 617 37 0 12 chr17 47558085 47558166 -41946387 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 1874 98 0 57 chr17 47558168 47558464 -41946089 - AluSp SINE Alu -34 279 1 402 247 44 50 chr17 47558464 47558492 -41946061 + L1ME4a LINE L1 5703 5730 -391 2507 56 0 0 chr17 47558492 47558797 -41945756 + AluY SINE Alu 1 305 -6 402 247 44 50 chr17 47558797 47558847 -41945706 + L1ME4a LINE L1 5730 5779 -342 2480 62 0 0 chr17 47558847 47559154 -41945399 + AluY SINE Alu 1 307 -4 402 247 44 50 chr17 47559154 47559256 -41945297 + L1ME4a LINE L1 5779 5883 -238 629 187 0 0 chr17 47559265 47559372 -41945181 + U6 snRNA snRNA 1 107 0 2134 116 0 22 chr17 47559396 47559715 -41944838 + AluSx SINE Alu 1 312 0 2071 134 0 0 chr17 47559738 47560043 -41944510 + AluSx SINE Alu 4 308 -4 899 184 19 0 chr17 47560045 47560203 -41944350 + AluJb SINE Alu 135 295 -17 314 219 211 24 chr17 47560465 47560588 -41943965 + MIR SINE MIR 105 250 -12 292 296 34 0 chr17 47560742 47560830 -41943723 - MIR3 SINE MIR -26 182 92 207 295 107 36 chr17 47560810 47560922 -41943631 + L2 LINE L2 3060 3179 -93 * 351 0 0 0 chr17 47561682 47561721 -41942832 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 488 211 53 0 chr17 47561729 47561843 -41942710 - MIR3 SINE MIR -1 207 88 226 168 161 124 chr17 47562030 47562088 -41942465 - MIR3 SINE MIR -25 183 129 2334 102 0 3 chr17 47562088 47562401 -41942152 + AluSq SINE Alu 1 312 -1 226 168 161 124 chr17 47562401 47562479 -41942074 - MIR3 SINE MIR -79 129 42 376 299 86 23 chr17 47562726 47562900 -41941653 - MIR3 SINE MIR -8 200 16 1818 154 0 47 chr17 47562954 47563126 -41941427 - AluSx SINE Alu -7 305 153 1894 125 0 17 chr17 47563126 47563447 -41941106 - AluSg SINE Alu 0 310 1 1818 154 0 47 chr17 47563447 47563593 -41940960 - AluSx SINE Alu -159 153 2 2029 118 7 0 chr17 47563628 47563945 -41940608 - AluSq SINE Alu 0 319 1 918 111 7 7 chr17 47563945 47564080 -41940473 - AluSq/x SINE Alu -178 135 1 2366 60 3 3 chr17 47564758 47565059 -41939494 - AluY SINE Alu -10 301 1 334 176 0 160 chr17 47565066 47565118 -41939435 + MIR SINE MIR 47 73 -189 1524 106 4 30 chr17 47565118 47565387 -41939166 - AluSx SINE Alu 0 320 58 334 176 0 160 chr17 47565387 47565451 -41939102 + MIR SINE MIR 73 146 -116 354 288 59 25 chr17 47565573 47565691 -41938862 - L2 LINE L2 -14 3258 3137 1974 90 0 15 chr17 47565788 47566055 -41938498 + AluSg SINE Alu 1 263 -47 289 217 17 0 chr17 47766113 47766173 -41738380 - AluJ/FRAM SINE Alu -12 290 230 1998 136 0 0 chr17 47766173 47766467 -41738086 - AluSx SINE Alu -18 294 1 193 171 57 0 chr17 47766614 47766649 -41737904 + L2 LINE L2 3268 3304 -9 1903 86 0 11 chr17 47766865 47767133 -41737420 + AluSc SINE Alu 1 265 -44 1476 102 42 5 chr17 47767233 47767448 -41737105 - MER30 DNA MER1_type -7 223 1 180 0 0 0 chr17 47767492 47767512 -41737041 + (T)n Simple_repeat Simple_repeat 1 20 0 574 322 85 27 chr17 47767739 47767997 -41736556 - L3 LINE CR1 -171 1406 1134 2236 65 0 26 chr17 47768440 47768769 -41735784 + AluY SINE Alu 1 311 0 935 260 111 42 chr17 47769047 47769526 -41735027 + L1ME4a LINE L1 5325 5847 -274 2166 102 0 0 chr17 47769526 47769820 -41734733 + AluSc SINE Alu 1 294 -15 935 260 111 42 chr17 47769820 47769883 -41734670 + L1ME4a LINE L1 5847 5904 -217 753 185 0 0 chr17 47770247 47770358 -41734195 - AluJb SINE Alu -65 247 134 1809 141 45 0 chr17 47770358 47770648 -41733905 - AluSx SINE Alu -9 303 1 753 185 0 0 chr17 47770648 47770671 -41733882 - AluJb SINE Alu -177 135 113 529 43 143 0 chr17 47770675 47770745 -41733808 - MER41B LTR ERV1 -385 250 171 1864 151 13 3 chr17 47770747 47771051 -41733502 - AluSx SINE Alu -5 307 1 708 240 34 22 chr17 47771235 47771414 -41733139 - AluJb SINE Alu -15 297 117 2126 108 0 3 chr17 47771528 47771825 -41732728 + AluSg SINE Alu 1 296 -14 1903 117 43 0 chr17 47772466 47772747 -41731806 + AluSx SINE Alu 1 293 -19 1482 174 22 7 chr17 47772797 47773073 -41731480 + AluJb SINE Alu 12 291 -21 1550 175 4 0 chr17 47773073 47773362 -41731191 - AluJb SINE Alu 0 302 13 864 119 0 0 chr17 47773572 47773690 -41730863 + AluSq/x SINE Alu 1 118 -194 21 0 0 0 chr17 47773694 47773715 -41730838 + AT_rich Low_complexity Low_complexity 1 21 0 1320 219 45 11 chr17 47773740 47774027 -41730526 + AluJb SINE Alu 1 297 -5 1881 150 13 3 chr17 47774211 47774517 -41730036 + AluSx SINE Alu 1 309 -3 518 57 143 0 chr17 47774519 47774589 -41729964 + MER41B LTR ERV1 171 250 -385 1345 151 50 0 chr17 47774616 47774835 -41729718 + AluSx SINE Alu 1 230 -82 905 212 6 0 chr17 47774936 47775106 -41729447 - AluJo SINE Alu -141 171 1 3333 203 26 50 chr17 47775106 47775203 -41729350 - L1M4 LINE L1 -1637 4509 4411 2215 111 3 0 chr17 47775203 47775509 -41729044 - AluSx SINE Alu -5 307 1 3333 203 26 50 chr17 47775509 47776326 -41728227 - L1M4 LINE L1 -1735 4411 3617 1837 136 7 33 chr17 47776434 47776735 -41727818 - AluSx SINE Alu -19 293 1 994 194 129 50 chr17 47776736 47777014 -41727539 - AluJo SINE Alu 0 302 3 1868 108 10 33 chr17 47777654 47777960 -41726593 - AluSx SINE Alu -13 299 1 748 167 0 36 chr17 47778361 47778499 -41726054 - FLAM_C SINE Alu 0 133 1 2123 111 3 0 chr17 47778614 47778912 -41725641 + AluSx SINE Alu 1 299 -13 298 291 13 0 chr17 47778917 47778996 -41725557 - L1ME LINE L1 -554 5616 5537 7560 72 2 1 chr17 47779391 47780359 -41724194 - LTR5 LTR ERVK 0 969 1 393 264 72 30 chr17 47780479 47780646 -41723907 - MER113 DNA MER1_type? -10 511 338 1682 142 21 18 chr17 47780659 47780941 -41723612 - AluJo SINE Alu -23 289 7 2040 122 0 6 chr17 47781006 47781318 -41723235 - AluSg SINE Alu 0 310 1 362 228 82 25 chr17 47781362 47781520 -41723033 - MER113 DNA MER1_type? -344 177 11 2128 122 3 0 chr17 47783995 47784299 -41720254 + AluSx SINE Alu 3 307 -5 1158 201 5 30 chr17 47784300 47784396 -41720157 + L1M4 LINE L1 4412 4509 -1637 1511 213 3 16 chr17 47784396 47784710 -41719843 + AluJo SINE Alu 1 310 -2 1158 201 5 30 chr17 47784710 47785043 -41719510 + L1M4 LINE L1 4509 4906 -1240 738 169 15 8 chr17 47785043 47785173 -41719380 + FLAM_C SINE Alu 1 131 -12 1850 170 58 31 chr17 47785174 47785628 -41718925 + L1M4 LINE L1 4894 5359 -814 1000 172 4 99 chr17 47785628 47785829 -41718724 + AluJo SINE Alu 54 226 -86 2181 96 0 0 chr17 47785829 47786120 -41718433 + AluSg1 SINE Alu 1 291 -18 1000 172 4 99 chr17 47786120 47786180 -41718373 + AluJo SINE Alu 226 290 -22 534 118 23 0 chr17 47786189 47786282 -41718271 + L1M LINE L1 5298 5400 -774 834 158 0 0 chr17 47786282 47786415 -41718138 + AluJb SINE Alu 1 133 -179 2119 114 3 16 chr17 47786415 47786732 -41717821 + AluSq SINE Alu 1 313 0 242 189 36 171 chr17 47786868 47786918 -41717635 + MLT1B LTR MaLR 1 30 -360 1629 163 13 29 chr17 47786918 47787224 -41717329 + AluJo SINE Alu 1 301 -11 242 189 36 171 chr17 47787224 47787284 -41717269 + MLT1B LTR MaLR 30 96 -294 601 101 11 0 chr17 47787359 47787448 -41717105 + AluSg/x SINE Alu 200 289 -21 5289 72 27 83 chr17 47787587 47789071 -41715482 - SVA Other Other -518 868 57 593 36 24 0 chr17 47789071 47789154 -41715399 + (GGGAGA)n Simple_repeat Simple_repeat 1 85 0 22 88 0 0 chr17 47790600 47790657 -41713896 + GC_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr17 47790800 47790821 -41713732 + GC_rich Low_complexity Low_complexity 1 21 0 1293 131 0 0 chr17 47791590 47791788 -41712765 + AluSq SINE Alu 115 312 -1 1828 127 7 7 chr17 47791846 47792129 -41712424 + AluSx SINE Alu 12 294 -18 1410 132 9 5 chr17 47792169 47792389 -41712164 - AluSx SINE Alu -91 221 1 1224 217 141 7 chr17 47792393 47792669 -41711884 - MER21B LTR ERV1 -550 313 1 358 209 40 115 chr17 47792753 47792901 -41711652 - MER20B DNA MER1_type -646 137 1 247 222 0 19 chr17 47793062 47793116 -41711437 - L2 LINE L2 0 3313 3261 1807 131 3 20 chr17 47793370 47793668 -41710885 + AluSg SINE Alu 1 293 -17 390 150 0 0 chr17 47793696 47793756 -41710797 + AluSp SINE Alu 75 134 -169 1832 124 14 0 chr17 47793875 47794165 -41710388 - AluSx SINE Alu -18 294 1 1098 177 6 125 chr17 47794227 47794571 -41709982 - AluSp SINE Alu -1 312 10 939 157 0 56 chr17 47795394 47795572 -41708981 + AluJb SINE Alu 130 297 -15 1940 101 57 13 chr17 47795653 47795951 -41708602 - AluSq SINE Alu -2 311 1 382 277 176 0 chr17 47795952 47796100 -41708453 + MIR SINE MIR 57 230 -32 2218 89 0 0 chr17 47796133 47796424 -41708129 - AluSx SINE Alu -16 296 6 672 232 6 42 chr17 47796486 47796654 -41707899 + MIR SINE MIR 77 238 -24 756 200 73 12 chr17 47796682 47796847 -41707706 - MLT1B LTR MaLR -7 460 286 2029 128 0 3 chr17 47796889 47797187 -41707366 - AluSx SINE Alu -15 297 1 986 103 0 0 chr17 47797187 47797323 -41707230 - AluJb SINE Alu -176 136 1 812 131 8 157 chr17 47797323 47797446 -41707107 - MLT1B LTR MaLR -189 201 61 1888 145 17 0 chr17 47797446 47797735 -41706818 - AluSx SINE Alu -18 294 1 812 131 8 157 chr17 47797735 47797797 -41706756 - MLT1B LTR MaLR -329 61 56 1673 147 16 36 chr17 47797797 47798103 -41706450 - AluJo SINE Alu -12 300 1 812 131 8 157 chr17 47798103 47798152 -41706401 - MLT1B LTR MaLR -334 56 1 2021 74 7 0 chr17 47798311 47798580 -41705973 - AluSq SINE Alu -8 305 35 517 341 119 37 chr17 47798595 47798862 -41705691 + L2 LINE L2 2059 2303 -1011 2143 109 3 0 chr17 47798862 47799173 -41705380 - AluSx SINE Alu 0 312 1 517 341 119 37 chr17 47799173 47799524 -41705029 + L2 LINE L2 2303 2728 -586 766 80 0 0 chr17 47799760 47799860 -41704693 + HY3 scRNA scRNA 1 100 -1 361 226 89 8 chr17 47799940 47800064 -41704489 + L1MC/D LINE L1 5333 5466 -2342 2275 75 0 3 chr17 47800256 47800551 -41704002 - AluSq SINE Alu -7 306 13 1327 107 10 0 chr17 47800651 47800847 -41703706 + AluSq SINE Alu 105 302 -11 821 120 0 0 chr17 47800860 47800977 -41703576 - AluSq/x SINE Alu -196 117 1 191 35 0 35 chr17 47800991 47801020 -41703533 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 238 250 0 16 chr17 47801032 47801096 -41703457 + MER21B LTR ERV1 474 536 -327 590 175 167 0 chr17 47801135 47801249 -41703304 - FLAM_C SINE Alu 0 133 1 210 156 0 0 chr17 47801270 47801302 -41703251 + L2 LINE L2 3272 3303 -10 1180 79 11 0 chr17 47802235 47802413 -41702140 + (TTC)n Simple_repeat Simple_repeat 1 180 0 545 108 11 0 chr17 47802413 47802501 -41702052 + (TCC)n Simple_repeat Simple_repeat 3 91 0 1997 126 13 7 chr17 47802503 47802812 -41701741 - AluJb SINE Alu -1 311 1 1548 134 0 0 chr17 47802850 47803081 -41701472 + AluSx SINE Alu 2 232 -80 34 42 0 0 chr17 47803951 47803999 -41700554 + GC_rich Low_complexity Low_complexity 1 48 0 1086 88 12 6 chr17 47804918 47805078 -41699475 - AluSx SINE Alu -15 297 137 1031 80 0 7 chr17 47805189 47805326 -41699227 - AluSx SINE Alu -171 142 7 23 0 0 0 chr17 47805994 47806017 -41698536 + AT_rich Low_complexity Low_complexity 1 23 0 2094 74 42 0 chr17 47806243 47806527 -41698026 + AluSp SINE Alu 1 296 -17 24 0 0 0 chr17 47806559 47806583 -41697970 + AT_rich Low_complexity Low_complexity 1 24 0 2026 104 24 0 chr17 47807618 47807906 -41696647 + AluSg SINE Alu 1 295 -15 2014 123 3 40 chr17 47808162 47808487 -41696066 - AluSp SINE Alu 0 313 1 1821 136 11 3 chr17 47808774 47809060 -41695493 - AluSg SINE Alu -22 288 1 2194 104 0 3 chr17 47809408 47809715 -41694838 - AluSq SINE Alu -7 306 1 185 65 32 0 chr17 47810794 47810825 -41693728 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2237 104 3 0 chr17 47811875 47812184 -41692369 - AluSp SINE Alu -2 311 2 2157 99 3 0 chr17 47812888 47813182 -41691371 - AluSq SINE Alu -18 295 1 2111 125 0 3 chr17 47813787 47814100 -41690453 - AluJb SINE Alu 0 312 1 288 0 0 0 chr17 47814618 47814650 -41689903 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2152 97 7 3 chr17 47814655 47814964 -41689589 - AluY SINE Alu -1 310 1 1675 159 0 35 chr17 47814968 47815282 -41689271 - AluJo SINE Alu -9 303 1 1422 112 0 5 chr17 47815397 47815602 -41688951 + AluSx SINE Alu 1 204 -108 22 88 0 0 chr17 47816514 47816571 -41687982 + GC_rich Low_complexity Low_complexity 1 57 0 234 0 0 0 chr17 47817732 47817758 -41686795 + (CCCCG)n Simple_repeat Simple_repeat 3 28 0 2281 99 7 0 chr17 47818277 47818569 -41685984 - AluSg SINE Alu -14 296 3 2208 111 3 20 chr17 47818865 47819171 -41685382 - AluSp SINE Alu -12 301 1 243 351 112 8 chr17 47819206 47819340 -41685213 + L2 LINE L2 3121 3268 -4 1897 122 4 18 chr17 47819509 47819787 -41684766 - AluSx SINE Alu -38 274 1 1014 103 0 28 chr17 47819944 47820089 -41684464 - L1PA8A LINE L1 0 6131 5991 21 36 0 0 chr17 47820652 47820680 -41683873 + AT_rich Low_complexity Low_complexity 1 28 0 183 129 0 0 chr17 47821234 47821265 -41683288 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 217 226 48 48 chr17 47821414 47821476 -41683077 + MIR3 SINE MIR 128 189 -19 1484 82 0 0 chr17 47822180 47822363 -41682190 + AluSp SINE Alu 115 297 -16 234 0 0 0 chr17 47823918 47823944 -41680609 + (A)n Simple_repeat Simple_repeat 1 26 0 2423 75 0 38 chr17 47823944 47824263 -41680290 + AluY SINE Alu 1 307 -4 1265 100 19 43 chr17 47824263 47824452 -41680101 - L1PB1 LINE L1 -285 5866 5681 2434 91 0 0 chr17 47824452 47824749 -41679804 + AluSc SINE Alu 1 297 -12 1265 100 19 43 chr17 47824749 47824769 -41679784 - L1PB1 LINE L1 -470 5681 5662 1210 227 84 6 chr17 47824806 47825128 -41679425 + MLT1F1 LTR MaLR 188 534 -33 1707 176 14 17 chr17 47825132 47825427 -41679126 - AluJo SINE Alu -18 294 1 24 0 0 0 chr17 47825440 47825464 -41679089 + AT_rich Low_complexity Low_complexity 1 24 0 2418 93 0 19 chr17 47825485 47825798 -41678755 - AluSx SINE Alu -5 307 1 555 211 115 19 chr17 47825803 47825959 -41678594 - MIR SINE MIR -74 188 18 831 199 63 19 chr17 47826334 47826540 -41678013 - MLT1A2 LTR MaLR -1 373 159 2122 112 0 43 chr17 47826540 47826862 -41677691 - AluSx SINE Alu -2 310 3 534 188 102 0 chr17 47827579 47827694 -41676859 + MIR SINE MIR 33 159 -63 2395 98 0 13 chr17 47827700 47828015 -41676538 + AluSp SINE Alu 3 313 0 909 228 26 0 chr17 47828047 47828240 -41676313 + MIR SINE MIR 21 218 -44 396 238 12 0 chr17 47828241 47828321 -41676232 - MER2 DNA MER2_type -264 81 1 578 279 68 0 chr17 47828888 47829035 -41675518 - MER5B DNA MER1_type -14 164 8 803 192 50 39 chr17 47829056 47829238 -41675315 - MER5A DNA MER1_type -3 186 3 963 202 84 10 chr17 47829252 47829455 -41675098 + MER58A DNA MER1_type 5 222 -2 300 212 219 27 chr17 47829465 47829611 -41674942 + MLT1J1 LTR MaLR 246 419 -27 366 233 226 0 chr17 47829635 47829768 -41674785 + MIR SINE MIR 57 219 -43 187 305 17 17 chr17 47830319 47830378 -41674175 - L2 LINE L2 -9 3263 3205 2408 93 10 0 chr17 47830469 47830770 -41673783 + AluSx SINE Alu 1 304 -8 189 107 0 0 chr17 47830783 47830811 -41673742 + (GGAGA)n Simple_repeat Simple_repeat 5 32 0 239 239 94 16 chr17 47830891 47830995 -41673558 + MER5B DNA MER1_type 31 165 -24 579 182 52 103 chr17 47831101 47831233 -41673320 + L1ME LINE L1 5100 5237 -929 4433 52 2 9 chr17 47831233 47831791 -41672762 + L1PA5 LINE L1 5601 6154 0 579 182 52 103 chr17 47831791 47832055 -41672498 + L1ME LINE L1 5237 5473 -693 492 259 54 0 chr17 47832056 47832168 -41672385 + MIR SINE MIR 58 175 -87 414 57 0 0 chr17 47832436 47832489 -41672064 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 890 136 0 0 chr17 47833356 47833481 -41671072 + FLAM_A SINE Alu 1 125 -8 1829 131 90 103 chr17 47833952 47834038 -41670515 + LTR12 LTR ERV1 4 90 -624 2563 55 0 0 chr17 47834038 47834331 -41670222 + AluY SINE Alu 1 293 -18 1829 131 90 103 chr17 47834331 47834731 -41669822 + LTR12 LTR ERV1 90 484 -230 580 224 158 6 chr17 47835065 47835230 -41669323 - MIR SINE MIR -9 253 64 189 0 0 0 chr17 47836131 47836152 -41668401 + (CAG)n Simple_repeat Simple_repeat 1 21 0 358 242 121 0 chr17 47836528 47836652 -41667901 - MER96 DNA MER1_type? 0 175 37 186 269 11 54 chr17 47836850 47836943 -41667610 + L2 LINE L2 2949 3037 -235 228 222 0 19 chr17 47837616 47837670 -41666883 + GA-rich Low_complexity Low_complexity 2 54 0 645 272 35 12 chr17 47839291 47839464 -41665089 - MIR SINE MIR -14 248 72 335 237 11 21 chr17 47839743 47839793 -41664760 + MIR3 SINE MIR 111 161 -47 513 315 11 28 chr17 47839793 47839974 -41664579 - MER5B DNA MER1_type 0 178 1 335 237 11 21 chr17 47839974 47840016 -41664537 + MIR3 SINE MIR 161 202 -6 497 135 0 0 chr17 47840026 47840100 -41664453 + MER58A DNA MER1_type 45 118 0 320 288 68 18 chr17 47840312 47840475 -41664078 - L3b LINE CR1 -310 1273 1103 516 129 97 0 chr17 47840867 47840960 -41663593 - L1MB8 LINE L1 -1 6177 6076 228 191 0 29 chr17 47840996 47841064 -41663489 + MLT1F LTR MaLR 464 529 -13 308 294 0 46 chr17 47841175 47841284 -41663269 - MIR SINE MIR -6 256 153 2439 170 36 42 chr17 47841450 47841601 -41662952 + LTR26B LTR ERV1 30 180 -351 2355 104 3 0 chr17 47841601 47841909 -41662644 - AluSq SINE Alu -4 309 1 2439 170 36 42 chr17 47841909 47841924 -41662629 + LTR26B LTR ERV1 180 194 -337 1889 154 52 13 chr17 47841924 47842308 -41662245 + L1MB8 LINE L1 5776 6174 -4 2439 170 36 42 chr17 47842308 47842645 -41661908 + LTR26B LTR ERV1 194 531 0 776 251 98 16 chr17 47842645 47843045 -41661508 - MLT1L LTR MaLR -134 481 10 467 279 23 23 chr17 47843056 47843185 -41661368 - MIR SINE MIR -111 151 23 181 236 91 0 chr17 47843595 47843650 -41660903 - L3 LINE CR1 -343 1234 1175 243 235 0 0 chr17 47844458 47844509 -41660044 - MIR SINE MIR -61 147 97 536 161 32 0 chr17 47845175 47845268 -41659285 + MER5A DNA MER1_type 4 99 -90 2287 109 3 6 chr17 47845437 47845750 -41658803 + AluSp SINE Alu 1 312 -1 3482 153 28 55 chr17 47845763 47845952 -41658601 + L1MB4 LINE L1 5486 5679 -501 2177 129 0 28 chr17 47845952 47846269 -41658284 + AluSq SINE Alu 1 308 -5 3482 153 28 55 chr17 47846269 47846730 -41657823 + L1MB4 LINE L1 5679 6118 -62 2203 132 3 0 chr17 47846730 47847041 -41657512 + AluSx SINE Alu 1 312 0 3482 153 28 55 chr17 47847041 47847095 -41657458 + L1MB4 LINE L1 6118 6172 -8 401 198 26 78 chr17 47847880 47847935 -41656618 + MIR3 SINE MIR 96 143 -65 2022 141 3 10 chr17 47847935 47848239 -41656314 + AluJo SINE Alu 1 302 -10 401 198 26 78 chr17 47848239 47848299 -41656254 + MIR3 SINE MIR 143 205 -3 257 195 58 81 chr17 47848435 47848522 -41656031 + MIR SINE MIR 178 262 0 1940 144 0 17 chr17 47849545 47849844 -41654709 - AluJo SINE Alu -18 294 1 199 146 44 38 chr17 47850508 47850561 -41653992 - MIR SINE MIR -63 145 100 240 289 0 0 chr17 47851201 47851253 -41653300 + L2 LINE L2 3254 3305 -8 851 193 11 33 chr17 47851371 47851552 -41653001 + MER69A DNA AcHobo 1 177 0 798 204 8 5 chr17 47851727 47851889 -41652664 - MSTD LTR MaLR 0 396 236 2072 108 14 4 chr17 47851889 47852167 -41652386 + AluSx SINE Alu 1 281 -31 318 50 0 0 chr17 47852167 47852207 -41652346 + (CA)n Simple_repeat Simple_repeat 1 40 0 798 204 8 5 chr17 47852207 47852221 -41652332 - MSTD LTR MaLR -133 263 251 864 241 102 53 chr17 47852222 47852261 -41652292 + HAL1 LINE L1 1000 1036 -1471 523 178 0 37 chr17 47852261 47852396 -41652157 + L1MB8 LINE L1 6049 6178 0 864 241 102 53 chr17 47852396 47852761 -41651792 + HAL1 LINE L1 1036 1439 -1068 2241 122 0 0 chr17 47852761 47853056 -41651497 + AluSx SINE Alu 1 295 -17 864 241 102 53 chr17 47853056 47853180 -41651373 + HAL1 LINE L1 1439 1555 -952 323 289 101 95 chr17 47853929 47854286 -41650267 - L2 LINE L2 0 3272 2914 246 260 0 0 chr17 47854837 47854887 -41649666 + L2 LINE L2 3262 3311 -2 590 269 233 0 chr17 47855067 47855260 -41649293 - MIR SINE MIR -10 252 15 483 345 38 13 chr17 47855827 47856062 -41648491 - MIR SINE MIR -2 260 20 319 224 122 77 chr17 47856703 47856859 -41647694 - MIR SINE MIR -79 183 21 193 243 0 0 chr17 47857742 47857779 -41646774 - L2 LINE L2 -6 3307 3271 1607 155 21 45 chr17 47857909 47858200 -41646353 + AluJb SINE Alu 15 298 -14 256 277 188 0 chr17 47858387 47858499 -41646054 - L2 LINE L2 0 3272 3140 317 247 0 13 chr17 47859192 47859269 -41645284 + MIR SINE MIR 187 262 0 1440 284 81 88 chr17 47859693 47860261 -41644292 + L3 LINE CR1 84 644 -933 1909 154 4 0 chr17 47860261 47860541 -41644012 - AluSx SINE Alu -31 281 1 1440 284 81 88 chr17 47860541 47860889 -41643664 + L3 LINE CR1 644 993 -584 230 228 51 63 chr17 47860932 47861011 -41643542 - MIR SINE MIR 0 262 185 2254 127 3 0 chr17 47861037 47861344 -41643209 - AluSx SINE Alu -4 308 1 2278 115 0 3 chr17 47862022 47862326 -41642227 - AluSg SINE Alu -7 303 1 2220 183 58 35 chr17 47862651 47863040 -41641513 - L1MB7 LINE L1 0 6184 5776 649 163 7 67 chr17 47863040 47863175 -41641378 - FLAM_A SINE Alu -5 128 2 2220 183 58 35 chr17 47863175 47863358 -41641195 - L1MB7 LINE L1 -408 5776 5599 584 129 35 0 chr17 47863358 47863466 -41641087 - AluSx SINE Alu 0 304 194 * 758 95 0 0 chr17 47863464 47863559 -41640994 - AluSx SINE Alu -216 96 2 4785 51 12 0 chr17 47863668 47864252 -41640301 - LTR10C LTR ERV1 0 591 1 1253 237 60 32 chr17 47864466 47864953 -41639600 - L1M4 LINE L1 -3271 2875 2399 568 182 115 62 chr17 47865149 47865213 -41639340 - MER3 DNA MER1_type 0 209 150 1383 227 13 22 chr17 47865213 47865526 -41639027 + AluJo SINE Alu 1 310 -2 568 182 115 62 chr17 47865526 47865653 -41638900 - MER3 DNA MER1_type -59 150 8 573 201 43 0 chr17 47866563 47866702 -41637851 + L1M4 LINE L1 2444 2588 -3558 351 237 51 60 chr17 47867131 47867301 -41637252 - L1ME LINE L1 -405 5765 5596 2176 108 0 7 chr17 47867370 47867695 -41636858 - AluSx SINE Alu 0 323 1 368 227 63 34 chr17 47867924 47868030 -41636523 + MIR3 SINE MIR 65 174 -34 1097 165 82 5 chr17 47868030 47868236 -41636317 - MER58A DNA MER1_type 0 224 3 368 227 63 34 chr17 47868236 47868271 -41636282 + MIR3 SINE MIR 174 207 -1 1684 78 0 5 chr17 47868348 47868553 -41636000 + AluSq SINE Alu 1 204 -109 382 202 61 0 chr17 47869269 47869368 -41635185 - MIR3 SINE MIR -14 194 90 245 196 20 0 chr17 47869473 47869524 -41635029 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 233 325 25 50 chr17 47869617 47869737 -41634816 + L3 LINE CR1 272 388 -1189 1285 151 88 54 chr17 47870264 47870616 -41633937 - Charlie5 DNA MER1_type 0 2623 2260 1706 151 0 0 chr17 47870618 47870869 -41633684 - AluJo SINE Alu -12 300 50 384 254 51 0 chr17 47870919 47871037 -41633516 - Charlie5 DNA MER1_type -2485 127 4 213 267 0 78 chr17 47871050 47871166 -41633387 + G-rich Low_complexity Low_complexity 6 112 0 214 329 0 28 chr17 47871722 47871865 -41632688 + C-rich Low_complexity Low_complexity 4 142 0 682 238 59 46 chr17 47872227 47872707 -41631846 - MLT1G1 LTR MaLR -1 589 52 486 302 87 14 chr17 47874280 47874493 -41630060 + MIR SINE MIR 29 262 0 360 272 130 24 chr17 47874647 47874816 -41629737 - MIR SINE MIR -29 233 47 185 200 60 0 chr17 47875321 47875371 -41629182 - MIR SINE MIR -79 129 77 369 272 163 38 chr17 47876518 47876702 -41627851 + MIR SINE MIR 2 208 -54 275 256 336 15 chr17 47877426 47877563 -41626990 + MER5A DNA MER1_type 9 189 0 252 280 136 25 chr17 47877570 47877688 -41626865 + L2 LINE L2 3173 3303 -10 1673 175 56 7 chr17 47877688 47877973 -41626580 + AluJo SINE Alu 1 299 -13 2262 104 0 43 chr17 47878070 47878396 -41626157 - AluSx SINE Alu 0 312 1 351 242 70 23 chr17 47879027 47879155 -41625398 - MIR3 SINE MIR -61 147 14 234 140 175 18 chr17 47879189 47879246 -41625307 + L2 LINE L2 3247 3312 -1 367 336 9 0 chr17 47879310 47879426 -41625127 - MIR SINE MIR -43 219 103 593 315 98 7 chr17 47879734 47880010 -41624543 + L2 LINE L2 3012 3312 -1 1944 133 7 0 chr17 47880136 47880414 -41624139 - AluSx SINE Alu 0 312 33 1668 141 52 19 chr17 47880516 47880785 -41623768 + AluJb SINE Alu 33 310 -2 340 301 22 44 chr17 47880812 47880948 -41623605 - L2 LINE L2 -6 3266 3134 309 297 172 47 chr17 47881538 47881730 -41622823 + L3b LINE CR1 1171 1386 -197 2557 99 5 30 chr17 47881754 47882127 -41622426 + THE1B LTR MaLR 1 364 0 298 312 169 0 chr17 47882178 47882332 -41622221 - MIR3 SINE MIR -13 195 16 580 273 107 5 chr17 47882403 47882618 -41621935 - MIR SINE MIR -15 247 7 715 205 141 0 chr17 47882820 47882976 -41621577 + MER45A DNA AcHobo 1 178 0 207 100 0 0 chr17 47883174 47883204 -41621349 + (TC)n Simple_repeat Simple_repeat 1 30 0 470 241 28 0 chr17 47883965 47884073 -41620480 - MIR SINE MIR -96 166 56 425 232 31 43 chr17 47884679 47884834 -41619719 - MER5A DNA MER1_type -16 164 7 296 319 83 42 chr17 47884840 47884984 -41619569 - MIR3 SINE MIR -47 161 12 1216 182 48 54 chr17 47885809 47886122 -41618431 + L1ME LINE L1 5483 5793 -373 1702 221 38 30 chr17 47886174 47886699 -41617854 + L1M4 LINE L1 3890 4418 -1728 835 259 18 28 chr17 47886968 47887254 -41617299 - AluY SINE Alu -7 304 22 378 0 0 0 chr17 47887279 47887321 -41617232 + (T)n Simple_repeat Simple_repeat 1 42 0 2396 74 3 0 chr17 47888895 47889191 -41615362 - AluSp SINE Alu -12 301 5 2106 95 0 3 chr17 47889197 47889492 -41615061 + L1PB1 LINE L1 5858 6151 0 425 270 44 38 chr17 47889514 47889673 -41614880 - MLT1F LTR MaLR -382 160 1 2263 102 0 3 chr17 47889687 47889982 -41614571 - AluSx SINE Alu -18 294 1 332 297 87 7 chr17 47890006 47890144 -41614409 + L1MC4 LINE L1 7894 8042 0 1991 165 0 0 chr17 47890209 47890512 -41614041 - AluSx SINE Alu -9 303 1 677 60 0 0 chr17 47890512 47890595 -41613958 - AluS SINE Alu -228 84 2 798 161 0 29 chr17 47890636 47890773 -41613780 - FLAM_C SINE Alu 0 133 1 1213 77 6 0 chr17 47890920 47891076 -41613477 + AluSp/q SINE Alu 157 313 0 1632 166 7 21 chr17 47891191 47891504 -41613049 + AluJb SINE Alu 3 311 0 344 270 93 93 chr17 47891698 47891957 -41612596 - MIR SINE MIR 0 262 4 1908 130 36 0 chr17 47892688 47892965 -41611588 + AluSx SINE Alu 1 287 -25 1647 135 92 39 chr17 47892967 47893248 -41611305 + AluSx SINE Alu 1 296 -16 2166 137 0 0 chr17 47893471 47893770 -41610783 + AluSg SINE Alu 1 299 -11 1664 190 20 0 chr17 47893820 47894115 -41610438 + AluJo SINE Alu 11 311 -1 313 71 0 0 chr17 47894177 47894219 -41610334 - 5S rRNA rRNA -79 42 1 2349 78 0 0 chr17 47894340 47894623 -41609930 + AluSc SINE Alu 1 283 -26 220 162 0 27 chr17 47894623 47894697 -41609856 + (TTAA)n Simple_repeat Simple_repeat 1 72 0 299 296 50 57 chr17 47896063 47896222 -41608331 + L2 LINE L2 3156 3313 0 2478 57 0 3 chr17 47896312 47896609 -41607944 - AluY SINE Alu -14 297 2 189 0 0 0 chr17 47896798 47896819 -41607734 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2120 119 31 0 chr17 47896939 47897232 -41607321 + AluSq SINE Alu 1 302 -11 2073 115 17 7 chr17 47898070 47898357 -41606196 + AluSx SINE Alu 1 290 -22 672 165 70 0 chr17 47898366 47898481 -41606072 + FLAM_A SINE Alu 1 123 -10 1188 96 0 19 chr17 47898493 47898649 -41605904 - AluSq SINE Alu -160 153 1 328 138 154 0 chr17 47898649 47898714 -41605839 - MER5A DNA MER1_type -113 76 2 294 260 230 0 chr17 47898904 47899004 -41605549 + MER5A DNA MER1_type 61 183 -6 370 306 104 8 chr17 47899053 47899187 -41605366 + MER5A DNA MER1_type 43 189 0 196 344 87 46 chr17 47899794 47899989 -41604564 + L2 LINE L2 2992 3194 -78 2174 109 10 0 chr17 47900210 47900503 -41604050 - AluSx SINE Alu -16 296 1 382 250 17 17 chr17 47900503 47900619 -41603934 - MIR SINE MIR -16 246 131 762 228 90 62 chr17 47900642 47900997 -41603556 - L1MDa LINE L1 -4339 2201 1837 276 307 13 0 chr17 47901215 47901290 -41603263 - L2 LINE L2 -1018 2296 2221 2317 98 0 0 chr17 47901293 47901578 -41602975 + AluSc SINE Alu 1 285 -24 360 291 27 0 chr17 47901755 47901903 -41602650 + (TA)n Simple_repeat Simple_repeat 2 153 0 198 103 0 0 chr17 47901903 47901932 -41602621 + (CA)n Simple_repeat Simple_repeat 2 30 0 509 218 112 37 chr17 47901932 47902326 -41602227 + L1ME1 LINE L1 2223 2694 -3964 803 169 0 0 chr17 47902327 47902445 -41602108 + FLAM_C SINE Alu 1 118 -25 1869 238 39 33 chr17 47902569 47902587 -41601966 + L1ME1 LINE L1 2728 2744 -3796 2083 149 0 0 chr17 47902587 47902883 -41601670 - AluSx SINE Alu -16 296 1 2109 136 3 0 chr17 47902891 47903192 -41601361 - AluSx SINE Alu -10 302 1 1869 238 39 33 chr17 47903192 47903803 -41600750 + L1ME1 LINE L1 2750 3370 -3170 2233 129 0 0 chr17 47903826 47904128 -41600425 + AluSx SINE Alu 1 302 -10 719 183 8 23 chr17 47904137 47904268 -41600285 + FLAM_C SINE Alu 5 133 0 2383 136 38 71 chr17 47904274 47904796 -41599757 + L1MA4 LINE L1 5769 6273 -27 786 138 174 10 chr17 47904933 47905128 -41599425 + MER58B DNA MER1_type 105 331 -10 817 195 50 18 chr17 47905136 47905357 -41599196 + L1ME1 LINE L1 5467 5694 -846 1557 172 7 55 chr17 47905360 47905668 -41598885 + AluJb SINE Alu 1 293 -19 2456 54 7 0 chr17 47905670 47905964 -41598589 + AluY SINE Alu 1 296 -15 1894 190 62 70 chr17 47905989 47906043 -41598510 + L1ME1 LINE L1 5684 5737 -823 1929 161 3 7 chr17 47906043 47906342 -41598211 + AluJo SINE Alu 1 298 -14 1894 190 62 70 chr17 47906342 47906508 -41598045 + L1ME1 LINE L1 5737 5903 -657 2435 56 26 3 chr17 47906508 47906812 -41597741 + AluY SINE Alu 1 311 0 1894 190 62 70 chr17 47906812 47907175 -41597378 + L1ME1 LINE L1 5903 6263 -297 2419 80 0 3 chr17 47907226 47907527 -41597026 + AluSq SINE Alu 1 300 -13 264 246 43 101 chr17 47907528 47907735 -41596818 + L1MD1 LINE L1 4155 4349 -2191 4648 175 56 35 chr17 47907862 47908132 -41596421 + L1MD1 LINE L1 4792 5055 -1581 2351 154 58 10 chr17 47908132 47908542 -41596011 - MSTB1 LTR MaLR 0 432 3 4648 175 56 35 chr17 47908542 47909670 -41594883 + L1MD1 LINE L1 5055 6232 -404 1878 164 61 17 chr17 47909670 47910029 -41594524 + THE1C LTR MaLR 1 375 0 4648 175 56 35 chr17 47910029 47910361 -41594192 + L1MD1 LINE L1 6232 6556 -80 2498 108 16 24 chr17 47911081 47911459 -41593094 - THE1C LTR MaLR 0 375 1 263 239 55 73 chr17 47911574 47911683 -41592870 + MLT1K LTR MaLR 143 249 -339 436 293 48 8 chr17 47912196 47912349 -41592204 - MIR3 SINE MIR -65 143 6 459 242 105 0 chr17 47912542 47912666 -41591887 + MIR SINE MIR 82 218 -44 205 200 0 0 chr17 47912823 47912863 -41591690 + T-rich Low_complexity Low_complexity 1 40 0 1420 182 29 118 chr17 47913768 47913929 -41590624 + LTR8A LTR ERV1 1 175 -552 2129 155 0 0 chr17 47913929 47914232 -41590321 + AluSx SINE Alu 1 303 -9 1420 182 29 118 chr17 47914232 47914819 -41589734 + LTR8A LTR ERV1 175 715 -12 2227 179 59 12 chr17 47914891 47915300 -41589253 + MSTA LTR MaLR 1 428 0 380 300 23 46 chr17 47915571 47915701 -41588852 + MIR3 SINE MIR 8 134 -74 656 24 0 12 chr17 47915848 47915931 -41588622 + (TTCC)n Simple_repeat Simple_repeat 2 83 0 492 263 120 78 chr17 47915988 47916205 -41588348 - MLT1I LTR MaLR 0 409 184 * 1191 268 28 32 chr17 47916198 47916598 -41587955 - LTR16C LTR ERVL -25 466 69 538 258 37 18 chr17 47916638 47916801 -41587752 - MLT1I LTR MaLR -218 191 26 301 212 165 0 chr17 47917140 47917225 -41587328 - MIR SINE MIR -66 196 98 214 167 148 0 chr17 47917217 47917271 -41587282 + MIR SINE MIR 76 137 -71 * 255 217 48 48 chr17 47917310 47917393 -41587160 - MIR SINE MIR -107 101 19 752 271 142 27 chr17 47918113 47918568 -41585985 - L2 LINE L2 0 3313 2797 579 287 83 74 chr17 47918568 47919003 -41585550 - MLT1J2 LTR MaLR -7 443 5 290 309 49 12 chr17 47919003 47919165 -41585388 - L2 LINE L2 -505 2809 2642 * 349 287 20 10 chr17 47919154 47919255 -41585298 - MIR SINE MIR -151 111 10 1717 119 70 98 chr17 47919378 47919764 -41584789 - THE1C LTR MaLR 0 375 1 1851 264 85 50 chr17 47920853 47921411 -41583142 + L1MEd LINE L1 38 634 -5485 2103 131 7 10 chr17 47921411 47921709 -41582844 - AluSx SINE Alu -15 297 1 1851 264 85 50 chr17 47921709 47921948 -41582605 + L1MEd LINE L1 634 863 -5256 303 344 48 38 chr17 47921948 47922134 -41582419 - MIR SINE MIR -51 211 24 402 313 77 11 chr17 47922531 47922713 -41581840 + MLT1J LTR MaLR 6 199 -312 1752 202 17 22 chr17 47922722 47923084 -41581469 + MLT1A1 LTR MaLR 6 365 0 309 275 112 34 chr17 47923123 47923301 -41581252 + MLT1J2 LTR MaLR 259 450 0 2006 148 7 3 chr17 47923473 47923777 -41580776 - AluJo SINE Alu -7 305 1 361 262 19 9 chr17 47924341 47924448 -41580105 - MIR3 SINE MIR -3 205 98 1387 173 105 68 chr17 47924782 47925120 -41579433 + LTR54B LTR ERV1 1 360 -138 1848 173 0 28 chr17 47925120 47925438 -41579115 + AluJo SINE Alu 1 309 -3 1387 173 105 68 chr17 47925438 47925538 -41579015 + LTR54B LTR ERV1 360 455 -43 451 304 125 42 chr17 47927086 47927398 -41577155 + L1MC4a LINE L1 4611 4948 -1198 2200 136 3 0 chr17 47927852 47928153 -41576400 + AluJb SINE Alu 6 307 -5 306 167 0 0 chr17 47928171 47928231 -41576322 + GA-rich Low_complexity Low_complexity 3 62 0 772 239 220 43 chr17 47928231 47928653 -41575900 + L1MC4a LINE L1 5318 5408 -748 1914 146 0 17 chr17 47928653 47928784 -41575769 + AluJb SINE Alu 1 133 -169 1098 104 0 0 chr17 47928784 47928947 -41575606 + (TA)n Simple_repeat Simple_repeat 2 164 0 1914 146 0 17 chr17 47928947 47929122 -41575431 + AluJb SINE Alu 133 302 0 772 239 220 43 chr17 47929122 47929190 -41575363 + L1MC4a LINE L1 5408 5463 -693 2143 94 22 0 chr17 47929568 47929877 -41574676 + AluSx SINE Alu 1 315 0 405 296 19 9 chr17 47930507 47930615 -41573938 + MER5A DNA MER1_type 59 167 -22 269 260 27 0 chr17 47930669 47930742 -41573811 - MIR SINE MIR -72 136 62 275 315 20 55 chr17 47930925 47931071 -41573482 - MIR SINE MIR -11 251 111 2131 155 64 0 chr17 47931204 47931579 -41572974 + MSTB LTR MaLR 1 399 -27 246 146 0 0 chr17 47931653 47931694 -41572859 + MSTB LTR MaLR 386 426 0 482 233 42 17 chr17 47931772 47931892 -41572661 + MIR SINE MIR 55 177 -85 596 314 24 19 chr17 47931916 47932126 -41572427 - MIR SINE MIR 0 262 52 5173 133 20 33 chr17 47932143 47933084 -41571469 - L1MA8 LINE L1 0 6291 5362 1705 187 17 3 chr17 47933084 47933383 -41571170 - AluJb SINE Alu -9 303 1 5173 133 20 33 chr17 47933383 47933402 -41571151 - L1MA8 LINE L1 -929 5362 5344 309 274 44 35 chr17 47934231 47934344 -41570209 - MIR SINE MIR -96 166 53 208 167 0 130 chr17 47934438 47934492 -41570061 - MIR SINE MIR -63 145 99 418 300 44 31 chr17 47936064 47936224 -41568329 + MIR SINE MIR 46 207 -55 320 290 138 14 chr17 47937262 47937318 -41567235 - MIR3 SINE MIR -48 160 88 214 355 78 14 chr17 47937318 47937459 -41567094 + MIR SINE MIR 1 150 -112 339 300 161 0 chr17 47938149 47938279 -41566274 + MIR3 SINE MIR 37 187 -21 276 273 17 85 chr17 47939631 47939807 -41564746 - MIR3 SINE MIR -41 167 4 1447 230 25 35 chr17 47939869 47940273 -41564280 - L2 LINE L2 0 3313 2914 276 293 73 32 chr17 47942491 47942614 -41561939 - MIR3 SINE MIR -8 200 73 1072 251 78 75 chr17 47944735 47945146 -41559407 - LTR16A LTR ERVL -7 443 32 693 243 136 14 chr17 47946513 47946727 -41557826 - MIR SINE MIR -20 242 3 398 315 55 42 chr17 47946780 47946945 -41557608 + MIR SINE MIR 41 207 -55 2162 131 0 49 chr17 47947127 47947455 -41557098 + AluSx SINE Alu 1 312 0 201 108 0 54 chr17 47947455 47947492 -41557061 + (GGAGA)n Simple_repeat Simple_repeat 4 38 0 182 191 21 0 chr17 47947512 47947559 -41556994 + CT-rich Low_complexity Low_complexity 4 51 0 201 363 45 40 chr17 47947669 47947892 -41556661 + L2 LINE L2 2657 2880 -434 190 156 0 0 chr17 47947948 47947980 -41556573 + MIR SINE MIR 219 250 -12 182 118 29 0 chr17 47948672 47948706 -41555847 + GA-rich Low_complexity Low_complexity 3 37 0 858 243 67 67 chr17 47948973 47949377 -41555176 + MLT1J LTR MaLR 14 417 -94 276 102 34 17 chr17 47949389 47949448 -41555105 + CT-rich Low_complexity Low_complexity 5 64 0 1272 162 5 24 chr17 47949448 47949658 -41554895 - AluJo SINE Alu -20 292 87 579 209 43 124 chr17 47950258 47950492 -41554061 + MER58C DNA MER1_type 1 215 0 368 278 203 0 chr17 47951036 47951169 -41553384 + MIR SINE MIR 13 172 -90 470 254 17 8 chr17 47951845 47951963 -41552590 + MIR SINE MIR 20 138 -124 3954 158 18 38 chr17 47951969 47952029 -41552524 + L1MB7 LINE L1 5429 5489 -695 1944 145 91 0 chr17 47952029 47952360 -41552193 - MER46B DNA MER2_type 0 236 1 3954 158 18 38 chr17 47952360 47953065 -41551488 + L1MB7 LINE L1 5489 6179 -5 2264 127 0 9 chr17 47953182 47953497 -41551056 + AluSx SINE Alu 1 312 0 1059 250 20 16 chr17 47953961 47954213 -41550340 - MIR SINE MIR -2 260 8 455 251 37 70 chr17 47954300 47954487 -41550066 - MER5A DNA MER1_type -1 188 8 711 181 50 44 chr17 47955121 47955303 -41549250 + MER20 DNA MER1_type 37 219 0 272 239 222 17 chr17 47957258 47957375 -41547178 - MIR3 SINE MIR -1 207 67 224 263 40 13 chr17 47957643 47957719 -41546834 - L2 LINE L2 -2 3270 3193 226 185 0 74 chr17 47957789 47957843 -41546710 - L2 LINE L2 -200 3072 3023 197 272 0 86 chr17 47957972 47958053 -41546500 + MIR SINE MIR 53 126 -82 285 133 0 0 chr17 47958259 47958304 -41546249 + MIR SINE MIR 109 153 -55 1090 243 61 9 chr17 47958964 47959420 -41545133 + L1ME4a LINE L1 5620 6118 -3 2185 103 6 50 chr17 47959562 47959881 -41544672 - AluSg SINE Alu -5 305 1 1654 199 6 22 chr17 47960806 47961122 -41543431 + AluJo SINE Alu 1 311 -1 2471 40 3 3 chr17 47961275 47961575 -41542978 + L1PA4 LINE L1 5853 6152 -3 434 309 115 36 chr17 47962044 47962373 -41542180 + Tigger8 DNA MER2_type 25 327 -339 1847 163 13 7 chr17 47962373 47962657 -41541896 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr17 47962657 47962679 -41541874 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1847 163 13 7 chr17 47962679 47962700 -41541853 + AluSx SINE Alu 289 308 -4 434 309 115 36 chr17 47962700 47962774 -41541779 + Tigger8 DNA MER2_type 327 394 -272 1696 140 34 27 chr17 47962774 47963066 -41541487 - AluJo SINE Alu -18 294 1 434 309 115 36 chr17 47963066 47963192 -41541361 + Tigger8 DNA MER2_type 394 597 -69 615 240 202 0 chr17 47963192 47963400 -41541153 - MIR SINE MIR -10 252 3 2294 105 0 3 chr17 47963490 47963795 -41540758 + AluSg SINE Alu 1 304 -6 1694 187 9 25 chr17 47965570 47965885 -41538668 - AluJo SINE Alu -2 310 1 480 277 32 26 chr17 47966330 47966485 -41538068 + MIR SINE MIR 2 157 -105 3020 187 36 6 chr17 47966631 47967181 -41537372 - MLT1F1 LTR MaLR 0 567 1 2099 98 65 0 chr17 47967680 47967956 -41536597 - AluSx SINE Alu -16 296 3 534 188 102 0 chr17 47968673 47968788 -41535765 + MIR SINE MIR 33 159 -63 2312 98 0 46 chr17 47968794 47969120 -41535433 + AluSp SINE Alu 3 313 0 924 227 21 0 chr17 47969152 47969346 -41535207 + MIR SINE MIR 21 218 -44 396 238 12 0 chr17 47969347 47969427 -41535126 - MER2 DNA MER2_type -264 81 1 578 279 68 0 chr17 47969995 47970142 -41534411 - MER5B DNA MER1_type -14 164 8 803 192 50 39 chr17 47970163 47970345 -41534208 - MER5A DNA MER1_type -3 186 3 963 202 84 10 chr17 47970359 47970562 -41533991 + MER58A DNA MER1_type 5 222 -2 300 212 219 27 chr17 47970572 47970718 -41533835 + MLT1J1 LTR MaLR 246 419 -27 366 233 226 0 chr17 47970742 47970875 -41533678 + MIR SINE MIR 57 219 -43 187 305 17 17 chr17 47971426 47971485 -41533068 - L2 LINE L2 -9 3263 3205 2408 93 10 0 chr17 47971576 47971877 -41532676 + AluSx SINE Alu 1 304 -8 189 107 0 0 chr17 47971890 47971918 -41532635 + (GGAGA)n Simple_repeat Simple_repeat 5 32 0 239 239 94 16 chr17 47971998 47972102 -41532451 + MER5B DNA MER1_type 31 165 -24 648 182 51 99 chr17 47972208 47972341 -41532212 + L1ME LINE L1 5100 5238 -928 4433 52 2 9 chr17 47972341 47972899 -41531654 + L1PA5 LINE L1 5601 6154 0 648 182 51 99 chr17 47972899 47973164 -41531389 + L1ME LINE L1 5238 5475 -691 489 254 55 0 chr17 47973165 47973275 -41531278 + MIR SINE MIR 60 175 -87 414 57 0 0 chr17 47973543 47973596 -41530957 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 890 136 0 0 chr17 47974463 47974588 -41529965 + FLAM_A SINE Alu 1 125 -8 1818 133 90 103 chr17 47975059 47975145 -41529408 + LTR12 LTR ERV1 4 90 -624 2563 55 0 0 chr17 47975145 47975438 -41529115 + AluY SINE Alu 1 293 -18 1818 133 90 103 chr17 47975438 47975838 -41528715 + LTR12 LTR ERV1 90 484 -230 593 218 158 6 chr17 47976172 47976337 -41528216 - MIR SINE MIR -9 253 64 189 0 0 0 chr17 47977238 47977259 -41527294 + (CAG)n Simple_repeat Simple_repeat 1 21 0 358 242 121 0 chr17 47977635 47977759 -41526794 - MER96 DNA MER1_type? 0 175 37 186 269 11 54 chr17 47977957 47978050 -41526503 + L2 LINE L2 2949 3037 -235 228 222 0 19 chr17 47978723 47978777 -41525776 + GA-rich Low_complexity Low_complexity 2 54 0 645 272 35 12 chr17 47980399 47980572 -41523981 - MIR SINE MIR -14 248 72 335 237 11 21 chr17 47980851 47980901 -41523652 + MIR3 SINE MIR 111 161 -47 513 315 11 28 chr17 47980901 47981082 -41523471 - MER5B DNA MER1_type 0 178 1 335 237 11 21 chr17 47981082 47981124 -41523429 + MIR3 SINE MIR 161 202 -6 497 135 0 0 chr17 47981134 47981208 -41523345 + MER58A DNA MER1_type 45 118 0 320 288 68 18 chr17 47981421 47981584 -41522969 - L3b LINE CR1 -310 1273 1103 516 129 97 0 chr17 47981976 47982069 -41522484 - L1MB8 LINE L1 -1 6177 6076 228 191 0 29 chr17 47982105 47982173 -41522380 + MLT1F LTR MaLR 464 529 -13 308 294 0 46 chr17 47982284 47982393 -41522160 - MIR SINE MIR -6 256 153 2439 170 36 42 chr17 47982559 47982710 -41521843 + LTR26B LTR ERV1 30 180 -351 2394 100 3 0 chr17 47982710 47983019 -41521534 - AluSq SINE Alu -3 310 1 2439 170 36 42 chr17 47983019 47983034 -41521519 + LTR26B LTR ERV1 180 194 -337 1854 156 52 13 chr17 47983034 47983418 -41521135 + L1MB8 LINE L1 5776 6174 -4 2439 170 36 42 chr17 47983418 47983755 -41520798 + LTR26B LTR ERV1 194 531 0 776 251 98 16 chr17 47983755 47984155 -41520398 - MLT1L LTR MaLR -134 481 10 467 279 23 23 chr17 47984166 47984295 -41520258 - MIR SINE MIR -111 151 23 199 218 91 0 chr17 47984706 47984761 -41519792 - L3 LINE CR1 -343 1234 1175 243 235 0 0 chr17 47985570 47985621 -41518932 - MIR SINE MIR -61 147 97 536 161 32 0 chr17 47986287 47986380 -41518173 + MER5A DNA MER1_type 4 99 -90 2287 109 3 6 chr17 47986549 47986862 -41517691 + AluSp SINE Alu 1 312 -1 3482 153 28 55 chr17 47986875 47987064 -41517489 + L1MB4 LINE L1 5486 5679 -501 2165 128 0 35 chr17 47987064 47987383 -41517170 + AluSq SINE Alu 1 308 -5 3482 153 28 55 chr17 47987383 47987844 -41516709 + L1MB4 LINE L1 5679 6118 -62 2203 132 3 0 chr17 47987844 47988155 -41516398 + AluSx SINE Alu 1 312 0 3482 153 28 55 chr17 47988155 47988209 -41516344 + L1MB4 LINE L1 6118 6172 -8 401 198 26 78 chr17 47988994 47989049 -41515504 + MIR3 SINE MIR 96 143 -65 2022 141 3 10 chr17 47989049 47989353 -41515200 + AluJo SINE Alu 1 302 -10 401 198 26 78 chr17 47989353 47989413 -41515140 + MIR3 SINE MIR 143 205 -3 257 195 58 81 chr17 47989549 47989636 -41514917 + MIR SINE MIR 178 262 0 1917 147 0 17 chr17 47990659 47990958 -41513595 - AluJo SINE Alu -18 294 1 199 146 44 38 chr17 47991614 47991667 -41512886 - MIR SINE MIR -63 145 100 240 289 0 0 chr17 47992307 47992359 -41512194 + L2 LINE L2 3254 3305 -8 851 193 11 33 chr17 47992477 47992658 -41511895 + MER69A DNA AcHobo 1 177 0 798 204 8 5 chr17 47992833 47992995 -41511558 - MSTD LTR MaLR 0 396 236 2072 108 14 4 chr17 47992995 47993273 -41511280 + AluSx SINE Alu 1 281 -31 336 48 0 0 chr17 47993273 47993315 -41511238 + (CA)n Simple_repeat Simple_repeat 1 42 0 798 204 8 5 chr17 47993315 47993329 -41511224 - MSTD LTR MaLR -133 263 251 864 241 102 53 chr17 47993330 47993369 -41511184 + HAL1 LINE L1 1000 1036 -1471 523 178 0 37 chr17 47993369 47993504 -41511049 + L1MB8 LINE L1 6049 6178 0 864 241 102 53 chr17 47993504 47993869 -41510684 + HAL1 LINE L1 1036 1439 -1068 2232 122 0 0 chr17 47993869 47994163 -41510390 + AluSx SINE Alu 1 294 -18 864 241 102 53 chr17 47994163 47994287 -41510266 + HAL1 LINE L1 1439 1555 -952 323 289 101 95 chr17 47995036 47995393 -41509160 - L2 LINE L2 0 3272 2914 246 260 0 0 chr17 47995944 47995994 -41508559 + L2 LINE L2 3262 3311 -2 590 269 233 0 chr17 47996174 47996367 -41508186 - MIR SINE MIR -10 252 15 483 345 38 13 chr17 47996934 47997169 -41507384 - MIR SINE MIR -2 260 20 316 224 122 77 chr17 47997810 47997966 -41506587 - MIR SINE MIR -79 183 21 193 243 0 0 chr17 47998849 47998886 -41505667 - L2 LINE L2 -6 3307 3271 1607 155 21 45 chr17 47999016 47999307 -41505246 + AluJb SINE Alu 15 298 -14 251 308 136 35 chr17 47999494 47999663 -41504890 - L2 LINE L2 0 3272 3087 317 247 0 13 chr17 48000298 48000375 -41504178 + MIR SINE MIR 187 262 0 1435 285 81 88 chr17 48000799 48001367 -41503186 + L3 LINE CR1 84 644 -933 1909 154 4 0 chr17 48001367 48001647 -41502906 - AluSx SINE Alu -31 281 1 1435 285 81 88 chr17 48001647 48001995 -41502558 + L3 LINE CR1 644 993 -584 230 228 51 63 chr17 48002038 48002117 -41502436 - MIR SINE MIR 0 262 185 2322 119 3 0 chr17 48002147 48002458 -41502095 - AluSx SINE Alu 0 312 1 2085 105 0 74 chr17 48002830 48003153 -41501400 + AluSx SINE Alu 1 299 -13 301 314 26 39 chr17 48003452 48003594 -41500959 - MIR SINE MIR -52 156 14 641 283 137 63 chr17 48003597 48003753 -41500800 + L3 LINE CR1 1047 1190 -387 2137 141 13 0 chr17 48003753 48004035 -41500518 + AluSx SINE Alu 1 289 -23 639 0 0 0 chr17 48004035 48004106 -41500447 + (CA)n Simple_repeat Simple_repeat 2 72 0 2137 141 13 0 chr17 48004106 48004129 -41500424 + AluSx SINE Alu 289 310 -2 641 283 137 63 chr17 48004129 48004382 -41500171 + L3 LINE CR1 1190 1486 -91 465 267 13 1 chr17 48004499 48004631 -41499922 - L1MB8 LINE L1 -3 6177 6043 246 317 32 95 chr17 48004935 48005007 -41499546 + MIR SINE MIR 40 115 -147 1837 176 7 0 chr17 48005007 48005313 -41499240 - AluJo SINE Alu -2 310 3 246 317 32 95 chr17 48005313 48005429 -41499124 + MIR SINE MIR 115 224 -38 2177 112 21 0 chr17 48005431 48005718 -41498835 - AluSx SINE Alu -19 293 1 568 127 16 71 chr17 48006241 48006367 -41498186 + L1MB8 LINE L1 5944 6062 -116 2143 121 0 0 chr17 48006369 48006699 -41497854 + AluSx SINE Alu 1 330 0 514 268 44 44 chr17 48006788 48006971 -41497582 - MIR SINE MIR -72 190 8 251 211 173 67 chr17 48007247 48007351 -41497202 - L2 LINE L2 -7 3306 3192 2088 90 65 0 chr17 48007364 48007635 -41496918 + AluSq SINE Alu 1 292 -21 669 47 28 0 chr17 48007635 48007741 -41496812 + (CATAA)n Simple_repeat Simple_repeat 2 110 0 57 0 0 0 chr17 48007957 48008014 -41496539 + AT_rich Low_complexity Low_complexity 1 57 0 824 136 8 0 chr17 48008014 48008132 -41496421 - FLAM_C SINE Alu -14 119 1 2424 104 0 0 chr17 48008189 48008497 -41496056 + AluSx SINE Alu 1 308 -4 1989 149 0 23 chr17 48009366 48009674 -41494879 + AluJb SINE Alu 7 307 -5 1517 239 101 10 chr17 48010301 48010707 -41493846 + L2 LINE L2 2362 2804 -510 552 181 60 130 chr17 48010736 48010952 -41493601 + L2 LINE L2 3109 3309 -4 2263 89 3 0 chr17 48010973 48011286 -41493267 + AluSp SINE Alu 1 314 0 1976 132 4 7 chr17 48011516 48011816 -41492737 + AluJo SINE Alu 3 301 0 186 43 0 0 chr17 48011820 48011843 -41492710 + (CA)n Simple_repeat Simple_repeat 1 23 0 353 258 134 18 chr17 48011955 48012172 -41492381 + L1ME4a LINE L1 5810 6051 -70 648 234 140 56 chr17 48012322 48012528 -41492025 + L2 LINE L2 2934 3178 -135 1748 171 0 7 chr17 48012528 48012802 -41491751 - AluJb SINE Alu -39 273 2 648 234 140 56 chr17 48012802 48012916 -41491637 + L2 LINE L2 3178 3281 -32 2204 122 0 0 chr17 48012918 48013206 -41491347 + AluSx SINE Alu 7 294 -18 2086 136 13 0 chr17 48013750 48014058 -41490495 - AluSx SINE Alu 0 312 1 516 302 47 30 chr17 48014116 48014351 -41490202 - LTR16C LTR ERVL -16 475 237 895 255 50 101 chr17 48014486 48014556 -41489997 + MER77 LTR ERV1 66 138 -572 2599 62 0 0 chr17 48014556 48014862 -41489691 - AluY SINE Alu -2 309 4 895 255 50 101 chr17 48014862 48015487 -41489066 + MER77 LTR ERV1 138 706 -4 1066 305 99 51 chr17 48015696 48015763 -41488790 + L3 LINE CR1 857 919 -658 2087 157 0 0 chr17 48015763 48016075 -41488478 + AluSx SINE Alu 1 312 0 1066 305 99 51 chr17 48016075 48016695 -41487858 + L3 LINE CR1 919 1577 0 2590 51 3 0 chr17 48017167 48017461 -41487092 + AluSp SINE Alu 1 295 -18 2178 107 0 0 chr17 48017584 48017883 -41486670 + AluSq SINE Alu 1 299 -14 1264 155 13 39 chr17 48017948 48018158 -41486395 - MER2 DNA MER2_type -1 344 139 3470 106 11 48 chr17 48018158 48018705 -41485848 + MER1A DNA MER1_type 1 527 0 1264 155 13 39 chr17 48018705 48018726 -41485827 - MER2 DNA MER2_type -206 139 119 518 141 43 11 chr17 48018726 48018818 -41485735 + AluSg/x SINE Alu 208 302 -10 694 159 11 93 chr17 48018818 48018876 -41485677 + MLT1C LTR MaLR 35 96 -294 1888 145 14 0 chr17 48018876 48019166 -41485387 + AluSx SINE Alu 1 294 -18 694 159 11 93 chr17 48019166 48019289 -41485264 + MLT1C LTR MaLR 96 201 -189 950 118 0 0 chr17 48019289 48019425 -41485128 + AluJb SINE Alu 1 136 -176 1953 141 0 3 chr17 48019425 48019723 -41484830 + AluSx SINE Alu 1 297 -15 768 206 67 6 chr17 48019765 48019930 -41484623 + MLT1C LTR MaLR 286 460 -7 668 232 6 42 chr17 48019958 48020126 -41484427 - MIR SINE MIR -24 238 77 2163 97 0 0 chr17 48020189 48020479 -41484074 + AluSx SINE Alu 7 296 -16 350 233 159 92 chr17 48020507 48020670 -41483883 - MIR SINE MIR -32 230 57 1936 105 58 10 chr17 48020671 48020966 -41483587 + AluSx SINE Alu 1 309 -3 1496 133 84 49 chr17 48021047 48021332 -41483221 - AluSg SINE Alu -15 295 1 2077 111 0 3 chr17 48021515 48021804 -41482749 - AluSx SINE Alu -24 288 1 344 244 58 64 chr17 48021809 48021965 -41482588 - L1MC4a LINE L1 -1813 5995 5841 27 29 0 0 chr17 48023664 48023698 -41480855 + AT_rich Low_complexity Low_complexity 1 34 0 270 363 66 39 chr17 48025055 48025237 -41479316 + L3b LINE CR1 1388 1574 -9 25 0 0 0 chr17 48025345 48025370 -41479183 + AT_rich Low_complexity Low_complexity 1 25 0 214 276 11 11 chr17 48025764 48025851 -41478702 + (CCCCG)n Simple_repeat Simple_repeat 3 89 0 31 26 0 0 chr17 48025982 48026020 -41478533 + GC_rich Low_complexity Low_complexity 1 38 0 195 146 0 0 chr17 48026319 48026360 -41478193 + (TCTCTG)n Simple_repeat Simple_repeat 3 43 0 213 163 23 0 chr17 48026601 48026644 -41477909 + (TA)n Simple_repeat Simple_repeat 1 44 0 243 324 73 36 chr17 48026953 48027172 -41477381 - L2 LINE L2 -914 2400 2174 2179 90 3 16 chr17 48027307 48027617 -41476936 + AluSx SINE Alu 1 306 -6 1961 82 99 0 chr17 48027694 48027976 -41476577 + AluSg SINE Alu 1 310 0 403 149 23 23 chr17 48028068 48028155 -41476398 + MIR SINE MIR 119 205 -57 2239 82 3 3 chr17 48028159 48028465 -41476088 - AluY SINE Alu -5 306 1 1650 163 13 16 chr17 48028494 48028807 -41475746 + AluJb SINE Alu 1 312 0 2263 73 27 0 chr17 48029084 48029385 -41475168 + AluSc SINE Alu 1 309 0 22 0 0 0 chr17 48029462 48029484 -41475069 + AT_rich Low_complexity Low_complexity 1 22 0 281 108 0 0 chr17 48029485 48029522 -41475031 - MER4E LTR ERV1 -76 703 667 1761 158 3 0 chr17 48029788 48030079 -41474474 + AluJo SINE Alu 1 292 -20 310 54 0 0 chr17 48030108 48030145 -41474408 + tRNA-Tyr-TAC tRNA tRNA 2 38 -38 274 269 176 19 chr17 48030338 48030446 -41474107 + MIR SINE MIR 63 187 -75 28 29 0 0 chr17 48030491 48030526 -41474027 + AT_rich Low_complexity Low_complexity 1 35 0 231 67 0 0 chr17 48030873 48030903 -41473650 - Alu SINE Alu -272 30 1 313 193 53 26 chr17 48030906 48031020 -41473533 - HAL1 LINE L1 -1420 1087 971 410 127 0 0 chr17 48031051 48031114 -41473439 - Alu SINE Alu -12 300 238 1486 176 0 4 chr17 48031115 48031388 -41473165 + AluJo SINE Alu 38 309 -3 257 353 115 0 chr17 48031390 48031512 -41473041 - L2 LINE L2 -15 3257 3122 228 307 229 7 chr17 48031657 48031698 -41472855 - MER5A DNA MER1_type -2 187 156 1727 139 3 108 chr17 48031698 48031835 -41472718 + AluSx SINE Alu 1 84 -218 2558 39 7 3 chr17 48031835 48032143 -41472410 - AluY SINE Alu -2 309 1 1727 139 3 108 chr17 48032143 48032337 -41472216 + AluSx SINE Alu 84 297 -5 228 307 229 7 chr17 48032337 48032448 -41472105 - MER5A DNA MER1_type -33 156 1 788 325 77 43 chr17 48032505 48032945 -41471608 - L2 LINE L2 -545 2769 2315 2218 85 7 0 chr17 48032973 48033266 -41471287 + AluSq SINE Alu 1 295 -18 1821 134 21 0 chr17 48033364 48033655 -41470898 + AluSx SINE Alu 1 297 -15 710 142 28 0 chr17 48033656 48033762 -41470791 + AluSx SINE Alu 2 110 -202 1470 112 0 0 chr17 48033806 48034011 -41470542 + AluSx SINE Alu 105 309 -1 414 200 22 0 chr17 48034011 48034101 -41470452 - AluJo/FLAM SINE Alu -169 133 42 732 236 6 6 chr17 48034167 48034328 -41470225 + FRAM SINE Alu 1 159 -17 453 199 68 57 chr17 48034336 48034394 -41470159 - HAL1 LINE L1 -1359 1148 1092 2108 125 0 0 chr17 48034394 48034698 -41469855 - AluSx SINE Alu -8 304 1 453 199 68 57 chr17 48034698 48034815 -41469738 - HAL1 LINE L1 -1415 1092 971 1218 150 0 42 chr17 48034846 48035014 -41469539 - AluSg/x SINE Alu -12 298 139 2091 115 13 3 chr17 48035014 48035318 -41469235 - AluSx SINE Alu 0 312 6 1218 150 0 42 chr17 48035318 48035362 -41469191 - AluSg/x SINE Alu -171 139 95 446 134 0 0 chr17 48035386 48035453 -41469100 - L1M4 LINE L1 -514 5664 5598 318 162 29 15 chr17 48035455 48035523 -41469030 - L1M4 LINE L1 -1040 5106 5038 1349 87 0 69 chr17 48035523 48035571 -41468982 + AluSc SINE Alu 90 140 -169 2347 72 3 7 chr17 48035571 48035877 -41468676 + AluSp SINE Alu 1 305 -8 1349 87 0 69 chr17 48035877 48036046 -41468507 + AluSc SINE Alu 140 292 -17 2703 199 43 34 chr17 48036099 48036262 -41468291 - L1M4 LINE L1 -1150 4996 4836 1421 156 50 63 chr17 48036262 48036411 -41468142 + AluJb SINE Alu 1 146 -166 2255 94 3 0 chr17 48036411 48036710 -41467843 + AluSp SINE Alu 1 300 -13 1421 156 50 63 chr17 48036710 48036861 -41467692 + AluJb SINE Alu 146 297 -15 2703 199 43 34 chr17 48036861 48037366 -41467187 - L1M4 LINE L1 -1310 4836 4322 746 247 13 6 chr17 48037366 48037524 -41467029 + FAM SINE Alu 1 159 -16 298 207 0 0 chr17 48038002 48038081 -41466472 - L1M4 LINE L1 -1810 4336 4258 2416 65 0 0 chr17 48038083 48038390 -41466163 + AluY SINE Alu 1 307 -4 1719 199 47 12 chr17 48038466 48038573 -41465980 - L1M4 LINE L1 -1712 4434 4332 2200 101 7 0 chr17 48038573 48038879 -41465674 - AluSg SINE Alu -2 308 1 1719 199 47 12 chr17 48038879 48039173 -41465380 - L1M4 LINE L1 -1814 4332 4019 1856 124 0 60 chr17 48039173 48039324 -41465229 + AluSx SINE Alu 1 125 -187 2072 100 0 35 chr17 48039324 48039635 -41464918 + AluY SINE Alu 1 300 -11 1856 124 0 60 chr17 48039635 48039798 -41464755 + AluSx SINE Alu 125 296 -16 989 232 55 48 chr17 48039799 48039961 -41464592 + MLT1A2 LTR MaLR 80 239 -135 2749 159 2 62 chr17 48039961 48040136 -41464417 + MER66B LTR ERV1 1 185 -301 2108 123 0 0 chr17 48040136 48040438 -41464115 - AluSg SINE Alu -8 302 1 2749 159 2 62 chr17 48040438 48040674 -41463879 + MER66B LTR ERV1 185 377 -109 1810 136 39 7 chr17 48040674 48040960 -41463593 + AluSx SINE Alu 1 295 -17 2749 159 2 62 chr17 48040960 48041064 -41463489 + MER66B LTR ERV1 377 486 0 989 232 55 48 chr17 48041064 48041194 -41463359 + MLT1A2 LTR MaLR 239 374 0 243 140 20 20 chr17 48041213 48041263 -41463290 + Charlie8 DNA MER1_type 1368 1417 -1000 27 0 0 0 chr17 48041317 48041344 -41463209 + AT_rich Low_complexity Low_complexity 1 27 0 1772 133 22 0 chr17 48041344 48041685 -41462868 + AluSx SINE Alu 1 347 0 703 156 7 71 chr17 48041686 48041827 -41462726 + FLAM_C SINE Alu 1 132 -11 2224 110 3 0 chr17 48041833 48042142 -41462411 + AluSp SINE Alu 1 310 -3 1583 167 6 45 chr17 48042241 48042553 -41462000 + AluJo SINE Alu 1 300 -12 2024 96 0 0 chr17 48042729 48042999 -41461554 - AluSg1 SINE Alu -10 299 30 1369 174 0 12 chr17 48042999 48043240 -41461313 - AluJb SINE Alu -45 267 30 1121 149 167 14 chr17 48043321 48043536 -41461017 - MER21B LTR ERV1 -615 248 1 255 254 101 80 chr17 48043545 48043683 -41460870 + L2 LINE L2 3171 3311 -2 692 199 18 21 chr17 48043791 48044127 -41460426 + GA-rich Low_complexity Low_complexity 1 335 0 221 140 60 0 chr17 48044139 48044189 -41460364 + A-rich Low_complexity Low_complexity 4 56 0 27 29 0 0 chr17 48044315 48044349 -41460204 + GC_rich Low_complexity Low_complexity 1 34 0 228 67 0 0 chr17 48046407 48046437 -41458116 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 * 518 122 0 11 chr17 48046435 48046525 -41458028 + (GGGA)n Simple_repeat Simple_repeat 4 92 0 180 241 0 0 chr17 48046530 48046588 -41457965 + A-rich Low_complexity Low_complexity 113 170 0 693 263 91 10 chr17 48046635 48046833 -41457720 + MIR SINE MIR 49 262 0 516 294 75 7 chr17 48047027 48047173 -41457380 - L2 LINE L2 0 3272 3117 1971 107 0 0 chr17 48047382 48047679 -41456874 + AluSx SINE Alu 10 306 0 1860 159 23 59 chr17 48048855 48049144 -41455409 - L1ME1 LINE L1 -5 6161 5863 2076 113 7 0 chr17 48049144 48049437 -41455116 - AluSx SINE Alu -17 295 1 1860 159 23 59 chr17 48049437 48049497 -41455056 - L1ME1 LINE L1 -303 5863 5825 925 207 200 34 chr17 48049497 48049792 -41454761 - MER2 DNA MER2_type 0 344 1 1860 159 23 59 chr17 48049792 48049832 -41454721 - L1ME1 LINE L1 -341 5825 5785 823 139 0 0 chr17 48049832 48049954 -41454599 + AluSg/x SINE Alu 102 223 -87 311 344 109 9 chr17 48049970 48050200 -41454353 + L2 LINE L2 1852 2104 -1210 1961 108 31 3 chr17 48050428 48050714 -41453839 - AluSx SINE Alu -18 294 1 878 136 8 0 chr17 48050716 48050848 -41453705 - AluSq/x SINE Alu -180 133 1 3480 54 35 0 chr17 48050941 48051369 -41453184 + MLT2A1 LTR ERVL 1 443 -1 483 139 0 0 chr17 48051369 48051441 -41453112 + AluJ/FLAM SINE Alu 7 78 -234 338 205 12 0 chr17 48051441 48051524 -41453029 + CT-rich Low_complexity Low_complexity 2 85 0 390 255 11 0 chr17 48051524 48051618 -41452935 - AluJb SINE Alu -1 301 207 707 112 0 0 chr17 48051619 48051717 -41452836 + AluJo/FRAM SINE Alu 202 299 -13 485 176 282 35 chr17 48051778 48051860 -41452693 + MER20 DNA MER1_type 3 63 -156 2272 87 3 0 chr17 48051860 48052160 -41452393 - AluSp SINE Alu -12 301 1 485 176 282 35 chr17 48052160 48052247 -41452306 + MER20 DNA MER1_type 63 214 -5 1358 148 0 0 chr17 48052818 48053027 -41451526 - AluJb SINE Alu -19 293 85 316 345 0 0 chr17 48054062 48054172 -41450381 + ERVL LTR ERVL 4372 4481 -1283 675 314 0 0 chr17 48054176 48054370 -41450183 + ERVL LTR ERVL 4777 4970 -794 386 38 0 19 chr17 48054373 48054426 -41450127 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 846 145 75 84 chr17 48054456 48054535 -41450018 - AluJb SINE Alu -100 212 134 2085 106 13 0 chr17 48054535 48054838 -41449715 - AluSg SINE Alu 0 310 4 2145 110 13 0 chr17 48054838 48055138 -41449415 - AluSx SINE Alu -8 304 1 846 145 75 84 chr17 48055138 48055271 -41449282 - AluJb SINE Alu -176 136 1 2247 86 3 3 chr17 48055363 48055664 -41448889 - AluSp SINE Alu -12 301 1 2530 43 0 0 chr17 48055670 48055973 -41448580 - AluY SINE Alu -8 303 1 544 165 74 16 chr17 48055977 48056098 -41448455 + MLT1A1 LTR MaLR 26 153 -212 252 159 23 0 chr17 48056102 48056146 -41448407 + Alu SINE Alu 1 45 -258 523 133 0 0 chr17 48056168 48056243 -41448310 + AluS SINE Alu 12 86 -227 275 211 0 0 chr17 48106295 48106347 -41398206 + MIR SINE MIR 57 108 -154 255 200 20 0 chr17 48106597 48106647 -41397906 + L2 LINE L2 3263 3313 0 2352 81 0 3 chr17 48106799 48107108 -41397445 + AluY SINE Alu 1 308 -3 895 136 0 15 chr17 48107339 48107471 -41397082 - FLAM_C SINE Alu -3 130 1 1811 108 4 8 chr17 48107546 48107814 -41396739 - AluSx SINE Alu -45 267 1 896 98 0 8 chr17 48107942 48108065 -41396488 + AluJb SINE Alu 12 133 -179 36 0 0 0 chr17 48108144 48108180 -41396373 + AT_rich Low_complexity Low_complexity 1 36 0 1436 196 7 24 chr17 48108188 48108479 -41396074 - AluJo SINE Alu -26 286 1 21 36 0 0 chr17 48108617 48108645 -41395908 + AT_rich Low_complexity Low_complexity 1 28 0 1859 127 0 0 chr17 48109677 48109953 -41394600 + AluSx SINE Alu 29 304 -8 205 233 0 0 chr17 48110026 48110069 -41394484 - MIR SINE MIR -26 236 194 1840 152 20 10 chr17 48110105 48110407 -41394146 - AluSx SINE Alu -5 307 3 2145 102 0 10 chr17 48110414 48110718 -41393835 - AluSg SINE Alu -9 301 1 2034 101 0 14 chr17 48110722 48111062 -41393491 - AluSg SINE Alu 0 336 1 425 66 33 0 chr17 48111303 48111364 -41393189 + AluSc SINE Alu 233 295 -14 1911 109 11 14 chr17 48111740 48111888 -41392665 - AluSx SINE Alu -29 283 135 2302 77 0 0 chr17 48111888 48112187 -41392366 - AluY SINE Alu -12 299 1 1911 109 11 14 chr17 48112187 48112322 -41392231 - AluSx SINE Alu -177 135 1 298 211 0 0 chr17 48112713 48112765 -41391788 - AluJo SINE Alu -10 292 241 583 143 170 27 chr17 48112766 48112878 -41391675 - AluJo SINE Alu -113 199 72 802 69 0 0 chr17 48112912 48113013 -41391540 + HY3 scRNA scRNA 1 101 0 892 194 0 29 chr17 48113193 48113368 -41391185 - FAM SINE Alu -5 170 1 1822 178 0 0 chr17 48113440 48113738 -41390815 + AluJb SINE Alu 1 298 -14 694 101 71 0 chr17 48113745 48113844 -41390709 - AluSc SINE Alu -19 290 185 2370 51 0 0 chr17 48114124 48114416 -41390137 - AluY SINE Alu -19 292 1 189 359 17 55 chr17 48114610 48114698 -41389855 - L2 LINE L2 -6 3307 3228 2131 90 17 0 chr17 48114698 48114987 -41389566 + AluSx SINE Alu 1 294 -18 189 359 17 55 chr17 48114987 48115079 -41389474 - L2 LINE L2 -85 3228 3134 340 250 40 0 chr17 48115360 48115436 -41389117 + MIR3 SINE MIR 97 175 -33 2298 56 0 16 chr17 48115775 48116078 -41388475 - AluY SINE Alu -13 298 1 1433 119 146 46 chr17 48116491 48116752 -41387801 + AluJo SINE Alu 1 287 -25 419 89 0 0 chr17 48116704 48116760 -41387793 + Alu SINE Alu 240 295 -17 2028 125 0 7 chr17 48116761 48117058 -41387495 + AluSx SINE Alu 1 295 -17 2073 76 42 3 chr17 48117059 48117347 -41387206 + AluSg SINE Alu 1 299 -11 1994 151 0 25 chr17 48117347 48117666 -41386887 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr17 48117829 48117852 -41386701 + AT_rich Low_complexity Low_complexity 1 23 0 2242 129 0 0 chr17 48118027 48118338 -41386215 + AluSq SINE Alu 1 311 -2 2191 113 3 0 chr17 48118948 48119249 -41385304 - AluSp SINE Alu -11 302 1 1626 173 0 4 chr17 48120209 48120516 -41384037 - AluJb SINE Alu 0 312 7 2226 96 3 16 chr17 48120648 48120961 -41383592 - AluSg SINE Alu -1 309 1 747 161 8 8 chr17 48120988 48121106 -41383447 + FLAM_C SINE Alu 1 118 -15 2451 68 3 0 chr17 48121248 48121557 -41382996 - AluY SINE Alu -1 310 1 2259 100 3 0 chr17 48121710 48122019 -41382534 - AluSp SINE Alu -3 310 1 2403 76 0 3 chr17 48122019 48122321 -41382232 - AluY SINE Alu -4 307 7 1975 149 0 3 chr17 48122330 48122626 -41381927 - AluSx SINE Alu -17 295 1 192 179 0 0 chr17 48123233 48123272 -41381281 + A-rich Low_complexity Low_complexity 1 39 0 1806 147 7 33 chr17 48123675 48123974 -41380579 - AluJo SINE Alu -21 291 1 2131 112 0 3 chr17 48124292 48124587 -41379966 + AluSx SINE Alu 1 294 -18 2244 97 0 28 chr17 48124593 48124912 -41379641 + AluSg SINE Alu 1 310 0 1482 208 41 0 chr17 48125175 48125469 -41379084 - AluJo SINE Alu -6 306 1 634 290 109 68 chr17 48125763 48125895 -41378658 + L1ME4a LINE L1 5334 5459 -662 2380 64 3 0 chr17 48125895 48126192 -41378361 - AluY SINE Alu -13 298 1 942 121 0 8 chr17 48126194 48126326 -41378227 - AluJo/FLAM SINE Alu -170 132 2 634 290 109 68 chr17 48126326 48126532 -41378021 + L1ME4a LINE L1 5459 5655 -466 1841 143 20 17 chr17 48126532 48126826 -41377727 + AluJo SINE Alu 2 296 -16 634 290 109 68 chr17 48126826 48127235 -41377318 + L1ME4a LINE L1 5655 6117 -4 2126 119 3 3 chr17 48127378 48127681 -41376872 - AluSx SINE Alu -8 304 2 2236 96 3 3 chr17 48127683 48127984 -41376569 - AluSx SINE Alu -11 301 1 1647 152 13 45 chr17 48128448 48128758 -41375795 + AluJb SINE Alu 13 312 0 365 290 10 0 chr17 48129454 48129554 -41374999 + MER5A DNA MER1_type 16 116 -73 2183 110 3 10 chr17 48130033 48130343 -41374210 + AluSx SINE Alu 1 308 -4 2245 95 0 0 chr17 48130904 48131200 -41373353 - AluSg1 SINE Alu -13 296 1 1871 146 4 0 chr17 48131201 48131481 -41373072 - AluJo SINE Alu -14 298 18 1937 161 0 6 chr17 48131558 48131869 -41372684 + AluJb SINE Alu 1 309 -3 320 316 186 20 chr17 48132683 48132756 -41371797 + L2 LINE L2 2978 3038 -234 450 0 0 0 chr17 48132756 48132806 -41371747 + (CA)n Simple_repeat Simple_repeat 2 51 0 320 316 186 20 chr17 48132806 48132985 -41371568 + L2 LINE L2 3038 3272 0 1808 152 22 0 chr17 48133313 48133589 -41370964 + AluJb SINE Alu 1 282 -30 319 287 42 63 chr17 48133741 48133884 -41370669 + L2 LINE L2 3168 3307 -6 1818 101 11 45 chr17 48134018 48134305 -41370248 + AluSx SINE Alu 36 312 0 1986 129 3 10 chr17 48135780 48136075 -41368478 + AluSg SINE Alu 2 294 -16 2218 101 0 3 chr17 48136085 48136382 -41368171 - AluSx SINE Alu -16 296 1 2105 131 0 0 chr17 48136382 48136678 -41367875 - AluSg SINE Alu -13 297 1 2099 121 0 3 chr17 48136678 48136973 -41367580 - AluSx SINE Alu -16 296 1 1595 187 0 35 chr17 48137044 48137354 -41367199 + AluJo SINE Alu 1 299 -13 1059 117 39 45 chr17 48139067 48139089 -41365464 - AluSg/x SINE Alu -2 310 289 788 188 0 8 chr17 48139089 48139222 -41365331 - AluJo/FLAM SINE Alu -170 132 1 1059 117 39 45 chr17 48139222 48139378 -41365175 - AluSg/x SINE Alu -23 289 133 317 310 98 24 chr17 48140250 48140505 -41364048 - MER102b DNA MER1_type -19 322 49 1368 124 16 0 chr17 48141654 48141847 -41362706 - AluJb SINE Alu -12 300 105 1952 100 15 4 chr17 48141851 48142121 -41362432 + AluSc SINE Alu 2 274 -35 757 152 9 0 chr17 48142382 48142494 -41362059 - AluJb SINE Alu -195 117 5 2177 98 14 0 chr17 48142531 48142828 -41361725 + AluSc SINE Alu 9 309 0 197 33 33 0 chr17 48147140 48147170 -41357383 + (TA)n Simple_repeat Simple_repeat 2 32 0 2408 72 0 3 chr17 48150976 48151280 -41353273 + AluY SINE Alu 1 303 -8 2370 77 3 0 chr17 48151342 48151642 -41352911 + AluSx SINE Alu 1 301 -11 185 344 0 84 chr17 48152133 48152287 -41352266 - L3 LINE CR1 -630 947 807 333 47 0 0 chr17 48152541 48152584 -41351969 + (TG)n Simple_repeat Simple_repeat 2 44 0 1908 130 0 51 chr17 48152920 48153236 -41351317 + AluJo SINE Alu 1 300 -12 224 313 155 19 chr17 48155804 48156069 -41348484 + L2 LINE L2 2860 3160 -112 282 106 0 0 chr17 48156543 48156590 -41347963 + (TCC)n Simple_repeat Simple_repeat 1 47 0 346 348 77 41 chr17 48156802 48157141 -41347412 + L1MC4a LINE L1 5704 6054 -1754 2219 100 3 3 chr17 48158125 48158424 -41346129 - AluSx SINE Alu -13 299 1 1316 208 51 0 chr17 48158426 48158719 -41345834 - AluJo SINE Alu -4 308 1 328 308 21 42 chr17 48159791 48159934 -41344619 - MIR SINE MIR -60 202 63 237 211 169 68 chr17 48160316 48160397 -41344156 - MIR SINE MIR -62 146 61 1747 148 22 41 chr17 48160397 48160715 -41343838 - AluJo SINE Alu 0 312 1 237 211 169 68 chr17 48160715 48160765 -41343788 - MIR SINE MIR -147 61 17 1491 122 148 0 chr17 48162887 48163150 -41341403 + AluSx SINE Alu 1 302 -10 270 311 60 33 chr17 48163195 48163346 -41341207 - L3b LINE CR1 -145 1438 1284 923 102 0 0 chr17 48163409 48163536 -41341017 + AluSg/x SINE Alu 174 300 -10 278 339 81 8 chr17 48163570 48163694 -41340859 - MIR SINE MIR -126 136 4 259 323 1 45 chr17 48163716 48163849 -41340704 + MIR SINE MIR 40 166 -62 268 232 110 12 chr17 48164390 48164472 -41340081 + L2 LINE L2 2967 3056 -216 400 244 134 17 chr17 48164757 48164876 -41339677 - MER5B DNA MER1_type 0 178 46 251 170 0 0 chr17 48166057 48166104 -41338449 + L1M3 LINE L1 5716 5762 -421 871 98 0 0 chr17 48166104 48166216 -41338337 + AluSq/x SINE Alu 21 132 -180 1307 162 0 5 chr17 48166220 48166424 -41338129 + AluSx SINE Alu 1 203 -109 466 83 0 0 chr17 48166428 48166488 -41338065 + AluSg/x SINE Alu 71 130 -180 2253 90 10 0 chr17 48166492 48166793 -41337760 + AluSx SINE Alu 1 304 -8 280 259 102 9 chr17 48167001 48167109 -41337444 - L2 LINE L2 -21 3251 3134 1930 127 24 0 chr17 48167540 48167832 -41336721 - AluSx SINE Alu -13 299 1 1894 113 53 0 chr17 48167977 48168260 -41336293 + AluSx SINE Alu 1 298 -14 1096 184 0 15 chr17 48168362 48168497 -41336056 + AluJb SINE Alu 1 134 -178 1867 106 44 10 chr17 48168497 48168790 -41335763 + AluY SINE Alu 1 303 -8 1096 184 0 15 chr17 48168790 48168850 -41335703 + AluJb SINE Alu 134 193 -119 221 158 26 0 chr17 48168956 48168994 -41335559 + GA-rich Low_complexity Low_complexity 4 42 0 391 165 11 11 chr17 48169007 48169098 -41335455 + GA-rich Low_complexity Low_complexity 1 91 0 291 221 12 35 chr17 48169120 48169206 -41335347 - L1MEd LINE L1 -6033 86 3 217 314 34 34 chr17 48169293 48169380 -41335173 + MIR SINE MIR 21 106 -105 279 216 20 78 chr17 48169605 48169707 -41334846 - MER5B DNA MER1_type -29 149 54 2221 107 3 0 chr17 48169781 48170090 -41334463 + AluSx SINE Alu 1 310 -2 2381 67 3 13 chr17 48170092 48170406 -41334147 + AluY SINE Alu 1 311 0 2160 121 0 0 chr17 48170634 48170931 -41333622 - AluSx SINE Alu -15 297 1 2229 108 0 6 chr17 48171311 48171625 -41332928 + AluSx SINE Alu 1 312 0 194 344 48 24 chr17 48171789 48171914 -41332639 - L2 LINE L2 -1312 2002 1875 422 235 80 75 chr17 48172147 48172334 -41332219 + L1MC4 LINE L1 7436 7623 -419 1863 134 51 0 chr17 48172339 48172631 -41331922 + AluSq SINE Alu 7 313 0 1128 152 10 20 chr17 48172641 48172838 -41331715 + AluJo SINE Alu 3 197 -115 2273 40 17 0 chr17 48173052 48173351 -41331202 - AluYa5 SINE Alu -7 304 1 857 191 12 6 chr17 48173488 48173661 -41330892 - L1MA4 LINE L1 0 6300 6127 776 172 77 47 chr17 48173664 48173833 -41330720 - FRAM SINE Alu -8 168 1 796 125 0 39 chr17 48173851 48173979 -41330574 + FLAM_C SINE Alu 2 124 -19 24 0 0 0 chr17 48173982 48174006 -41330547 + AT_rich Low_complexity Low_complexity 1 24 0 2319 60 7 3 chr17 48174015 48174313 -41330240 + AluY SINE Alu 1 299 -12 665 133 165 6 chr17 48174314 48174472 -41330081 - L1MA4 LINE L1 -154 6146 5964 2324 69 10 0 chr17 48174480 48174784 -41329769 - AluSx SINE Alu -5 307 1 249 297 54 34 chr17 48177876 48178024 -41326529 - MIR SINE MIR -15 247 97 2207 74 17 10 chr17 48178025 48178321 -41326232 + AluSx SINE Alu 1 298 -14 403 263 102 0 chr17 48179184 48179302 -41325251 - MIR SINE MIR -70 192 63 2176 101 7 3 chr17 48179686 48179994 -41324559 - AluSc SINE Alu 0 309 1 258 32 0 0 chr17 48180157 48180188 -41324365 + (A)n Simple_repeat Simple_repeat 1 31 0 246 109 0 47 chr17 48181081 48181145 -41323408 + (CCCCG)n Simple_repeat Simple_repeat 2 62 0 27 0 0 0 chr17 48181259 48181286 -41323267 + GC_rich Low_complexity Low_complexity 1 27 0 380 274 29 0 chr17 48182119 48182221 -41322332 - MIR SINE MIR -115 147 43 189 233 137 41 chr17 48182517 48182590 -41321963 - L2 LINE L2 -24 3248 3169 469 260 67 20 chr17 48183256 48183406 -41321147 - L2 LINE L2 -5 3267 3111 309 275 101 44 chr17 48183988 48184195 -41320358 - MIR SINE MIR -19 243 23 1643 157 3 53 chr17 48184195 48184513 -41320040 - AluJo SINE Alu 0 312 11 309 275 101 44 chr17 48184513 48184527 -41320026 - MIR SINE MIR -239 23 11 907 230 25 0 chr17 48184553 48184753 -41319800 - MIR SINE MIR -41 221 17 353 169 38 3 chr17 48184846 48184975 -41319578 - MER53 DNA DNA 0 189 23 * 399 146 61 0 chr17 48184905 48184987 -41319566 + MER53 DNA DNA 103 189 0 393 151 0 0 chr17 48185860 48185946 -41318607 + (CA)n Simple_repeat Simple_repeat 2 87 0 191 211 225 0 chr17 48186124 48186195 -41318358 + MIR3 SINE MIR 104 190 -18 200 195 24 0 chr17 48186552 48186593 -41317960 - L2 LINE L2 -18 3254 3213 272 194 0 15 chr17 48186696 48186763 -41317790 - L1MB8 LINE L1 0 6178 6113 1572 146 4 15 chr17 48186767 48187035 -41317518 + AluJo SINE Alu 33 297 -15 360 111 0 0 chr17 48187164 48187218 -41317335 + (A)n Simple_repeat Simple_repeat 1 54 0 956 275 16 12 chr17 48187269 48187324 -41317229 - L1MC4 LINE L1 -825 7009 6956 2096 90 7 10 chr17 48187324 48187625 -41316928 - AluSg1 SINE Alu -9 300 1 956 275 16 12 chr17 48187625 48187886 -41316667 - L1MC4 LINE L1 -878 6956 6670 200 211 18 18 chr17 48189247 48189304 -41315249 + (CGGGG)n Simple_repeat Simple_repeat 5 61 0 232 305 48 96 chr17 48190099 48190141 -41314412 + MIR SINE MIR 61 103 -159 2248 53 17 10 chr17 48190141 48190440 -41314113 - AluSc SINE Alu -8 301 1 232 305 48 96 chr17 48190440 48190564 -41313989 + MIR SINE MIR 103 219 -43 209 353 38 30 chr17 48191106 48191239 -41313314 + L2 LINE L2 2928 3061 -211 356 280 49 42 chr17 48191484 48191697 -41312856 + MIR3 SINE MIR 9 222 -40 208 214 0 0 chr17 48192232 48192274 -41312279 + C-rich Low_complexity Low_complexity 1 42 0 313 234 0 65 chr17 48193202 48193309 -41311244 + G-rich Low_complexity Low_complexity 4 103 0 222 37 0 0 chr17 48193806 48193833 -41310720 + (T)n Simple_repeat Simple_repeat 1 27 0 23 54 0 0 chr17 48195320 48195357 -41309196 + AT_rich Low_complexity Low_complexity 1 37 0 2379 68 7 0 chr17 48196981 48197288 -41307265 - AluSp SINE Alu -4 309 1 2147 84 7 3 chr17 48197458 48197745 -41306808 + AluSp SINE Alu 1 288 -25 1993 119 7 0 chr17 48197921 48198216 -41306337 - AluSx SINE Alu -15 297 1 1329 137 62 78 chr17 48198216 48198522 -41306031 - AluJb SINE Alu -10 302 1 2097 71 7 52 chr17 48198533 48198842 -41305711 - AluY SINE Alu -16 295 1 24 0 0 0 chr17 48198915 48198939 -41305614 + AT_rich Low_complexity Low_complexity 1 24 0 2046 119 0 22 chr17 48198944 48199256 -41305297 + AluSp SINE Alu 1 305 -8 1156 44 0 0 chr17 48199256 48199391 -41305162 + AluSq/x SINE Alu 1 135 -178 2256 86 3 7 chr17 48199391 48199695 -41304858 + AluSc SINE Alu 1 303 -6 422 270 86 20 chr17 48199865 48200017 -41304536 - MLT1C LTR MaLR 0 467 306 783 204 0 0 chr17 48200017 48200154 -41304399 - FLAM_C SINE Alu -5 138 2 1145 178 74 58 chr17 48200155 48200288 -41304265 - MLT1C LTR MaLR -153 314 185 2255 94 0 3 chr17 48200288 48200586 -41303967 - AluSp SINE Alu -14 299 3 1145 178 74 58 chr17 48200586 48200761 -41303792 - MLT1C LTR MaLR -282 185 1 303 254 42 0 chr17 48200772 48200843 -41303710 - L2 LINE L2 -47 3266 3193 1402 135 10 0 chr17 48200865 48201072 -41303481 - AluJb SINE Alu -19 293 85 34 24 0 0 chr17 48201075 48201116 -41303437 + AT_rich Low_complexity Low_complexity 1 41 0 2085 124 13 0 chr17 48201116 48201423 -41303130 - AluSq SINE Alu -2 311 1 2195 94 7 3 chr17 48201499 48201808 -41302745 - AluSg SINE Alu 0 310 1 257 220 68 0 chr17 48201961 48202020 -41302533 + MSTD LTR MaLR 1 63 -365 670 124 10 0 chr17 48202021 48202118 -41302435 - AluSp/q SINE Alu -18 295 198 1702 117 24 10 chr17 48202233 48202524 -41302029 + AluSc SINE Alu 1 295 -14 1165 206 24 41 chr17 48202524 48202826 -41301727 + MSTD LTR MaLR 77 404 -24 224 227 25 160 chr17 48202850 48202907 -41301646 - MIR SINE MIR -146 116 82 923 158 0 0 chr17 48202907 48203040 -41301513 + FLAM_C SINE Alu 1 133 0 224 227 25 160 chr17 48203040 48203101 -41301452 - MIR SINE MIR -180 82 14 2334 86 0 0 chr17 48203134 48203438 -41301115 + AluSg SINE Alu 1 304 -6 226 187 80 0 chr17 48203557 48203592 -41300961 + CT-rich Low_complexity Low_complexity 1 32 -49 786 192 0 0 chr17 48203592 48203722 -41300831 - FLAM_C SINE Alu -3 130 1 226 187 80 0 chr17 48203722 48203761 -41300792 + CT-rich Low_complexity Low_complexity 32 81 0 1122 149 0 0 chr17 48203762 48203937 -41300616 - AluSg/x SINE Alu -6 304 130 1944 127 26 10 chr17 48203937 48204244 -41300309 - AluSx SINE Alu 0 312 1 2172 97 3 0 chr17 48204313 48204611 -41299942 + AluSp SINE Alu 1 299 -14 279 0 0 0 chr17 48204612 48204643 -41299910 + (CA)n Simple_repeat Simple_repeat 2 32 0 34 24 0 0 chr17 48204649 48204690 -41299863 + AT_rich Low_complexity Low_complexity 1 41 0 2232 98 0 25 chr17 48205216 48205533 -41299020 - AluSp SINE Alu -2 311 3 2035 113 31 0 chr17 48205535 48205828 -41298725 - AluSx SINE Alu -10 302 1 758 136 85 0 chr17 48205835 48205953 -41298600 - AluSq/x SINE Alu -184 129 2 184 283 113 28 chr17 48206004 48206110 -41298443 - L2 LINE L2 -248 3024 2910 254 284 95 35 chr17 48206260 48206376 -41298177 + L2 LINE L2 3191 3313 0 800 177 0 0 chr17 48206709 48206850 -41297703 + AluJb SINE Alu 163 303 -9 587 259 117 16 chr17 48206852 48207099 -41297454 + L1MC4 LINE L1 7635 7906 -136 1925 153 0 6 chr17 48207100 48207413 -41297140 - AluJb SINE Alu -1 311 1 484 212 45 0 chr17 48207497 48207629 -41296924 + L1MC4 LINE L1 7905 8042 0 405 103 23 23 chr17 48208237 48208324 -41296229 + (TCC)n Simple_repeat Simple_repeat 2 88 0 218 217 0 0 chr17 48208727 48208773 -41295780 - L2 LINE L2 0 3272 3227 * 242 253 71 50 chr17 48208747 48208846 -41295707 - MIR SINE MIR -14 248 148 430 217 56 75 chr17 48209070 48209206 -41295347 + MIR SINE MIR 63 197 -65 1958 132 10 0 chr17 48209206 48209502 -41295051 + AluSx SINE Alu 1 299 -13 430 217 56 75 chr17 48209502 48209526 -41295027 + MIR SINE MIR 197 220 -42 2085 92 4 0 chr17 48209552 48209861 -41294692 + AluSp SINE Alu 1 310 0 1204 245 65 15 chr17 48209866 48210205 -41294348 + L1ME LINE L1 5449 5804 -366 411 242 11 0 chr17 48210308 48210399 -41294154 + AluS SINE Alu 221 312 0 290 87 22 0 chr17 48210399 48210445 -41294108 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 2329 93 0 10 chr17 48210514 48210827 -41293726 - AluSx SINE Alu -2 310 1 797 279 51 22 chr17 48210941 48211308 -41293245 - L1MC4 LINE L1 -2004 5804 5467 278 303 83 61 chr17 48211350 48211482 -41293071 + L2 LINE L2 3137 3271 -1 713 47 0 0 chr17 48211552 48211637 -41292916 - AluSg/x SINE Alu -13 299 215 543 227 16 90 chr17 48211811 48211878 -41292675 + L1MC4a LINE L1 5708 5778 -556 1069 190 56 0 chr17 48211878 48212073 -41292480 + MER3 DNA MER1_type 4 209 0 543 227 16 90 chr17 48212073 48212199 -41292354 + L1MC4a LINE L1 5778 5912 -422 1550 162 3 60 chr17 48212199 48212513 -41292040 + AluJb SINE Alu 1 296 -16 2079 119 3 0 chr17 48212513 48212806 -41291747 + AluSp SINE Alu 1 294 -19 543 227 16 90 chr17 48212806 48212854 -41291699 + L1MC4a LINE L1 5775 5825 -509 2410 65 0 7 chr17 48212861 48213171 -41291382 + AluY SINE Alu 1 308 -3 1717 145 13 69 chr17 48213184 48213502 -41291051 + AluJb SINE Alu 1 300 -12 261 62 0 0 chr17 48213502 48213534 -41291019 + U4 snRNA snRNA 2 33 -112 1596 177 0 33 chr17 48213749 48213891 -41290662 + AluJb SINE Alu 1 146 -166 2122 107 0 17 chr17 48213891 48214191 -41290362 + AluSx SINE Alu 1 295 -17 1596 177 0 33 chr17 48214191 48214353 -41290200 + AluJb SINE Alu 146 295 -17 2018 144 3 0 chr17 48214356 48214661 -41289892 + AluSx SINE Alu 1 306 -6 2316 88 0 10 chr17 48214743 48215050 -41289503 - AluSg SINE Alu -6 304 1 279 216 20 78 chr17 48215124 48215226 -41289327 + MER5B DNA MER1_type 54 149 -29 217 314 34 34 chr17 48215451 48215538 -41289015 - MIR SINE MIR -105 103 21 183 280 56 28 chr17 48215513 48215620 -41288933 + MIR SINE MIR 105 214 -48 * 291 221 12 35 chr17 48215624 48215710 -41288843 + L1MEd LINE L1 3 86 -6033 341 94 0 19 chr17 48215732 48215785 -41288768 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 489 161 0 0 chr17 48215785 48215872 -41288681 + CT-rich Low_complexity Low_complexity 2 88 0 1828 133 30 23 chr17 48215873 48216175 -41288378 - AluSx SINE Alu -6 306 3 1900 140 0 19 chr17 48216331 48216645 -41287908 + AluJo SINE Alu 3 310 -2 610 131 0 0 chr17 48216765 48216849 -41287704 + AluY SINE Alu 2 85 -226 314 85 0 43 chr17 48216849 48216896 -41287657 - AluSg/x SINE Alu -142 160 116 1807 53 0 4 chr17 48216898 48217125 -41287428 + AluY SINE Alu 73 298 -13 635 252 58 83 chr17 48217132 48217200 -41287353 + L1M4 LINE L1 2440 2508 -3638 2503 55 0 0 chr17 48217200 48217511 -41287042 + AluY SINE Alu 1 311 0 635 252 58 83 chr17 48217511 48217877 -41286676 + L1M4 LINE L1 2508 2882 -3264 2011 116 3 0 chr17 48217877 48218162 -41286391 + AluSg SINE Alu 3 288 -22 635 252 58 83 chr17 48218162 48218191 -41286362 + L1M4 LINE L1 2882 2894 -3252 1719 152 14 20 chr17 48218191 48218487 -41286066 + AluJo SINE Alu 1 294 -18 635 252 58 83 chr17 48218487 48218502 -41286051 + L1M4 LINE L1 2894 2908 -3238 2203 104 0 0 chr17 48218583 48218880 -41285673 + AluSx SINE Alu 3 299 -13 864 153 0 0 chr17 48219038 48219175 -41285378 + FLAM_C SINE Alu 1 137 -6 1482 178 10 33 chr17 48219177 48219310 -41285243 + AluJb SINE Alu 1 136 -176 2055 110 20 0 chr17 48219310 48219602 -41284951 + AluSg SINE Alu 1 298 -12 1482 178 10 33 chr17 48219602 48219771 -41284782 + AluJb SINE Alu 136 296 -16 372 282 48 0 chr17 48219837 48219961 -41284592 - MIR SINE MIR -84 178 49 188 83 0 28 chr17 48220043 48220079 -41284474 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1124 53 0 0 chr17 48220117 48220249 -41284304 - AluY SINE Alu -179 132 1 1611 176 3 29 chr17 48220251 48220557 -41283996 - AluJo SINE Alu -14 298 1 1692 172 7 0 chr17 48220793 48221083 -41283470 + AluJb SINE Alu 1 292 -20 2001 140 3 0 chr17 48221085 48221385 -41283168 + AluSx SINE Alu 1 301 -11 344 364 68 11 chr17 48221576 48221752 -41282801 - MIR SINE MIR -10 252 67 5443 146 32 27 chr17 48221752 48221800 -41282753 + L1PB1 LINE L1 4128 4174 -1977 2094 84 30 7 chr17 48221800 48221926 -41282627 + AluY SINE Alu 1 123 -188 360 0 0 0 chr17 48221926 48221966 -41282587 + (TA)n Simple_repeat Simple_repeat 1 40 0 2094 84 30 7 chr17 48221966 48222137 -41282416 + AluY SINE Alu 123 305 -6 5443 146 32 27 chr17 48222137 48222623 -41281930 + L1PB1 LINE L1 4174 4656 -1495 2005 120 0 10 chr17 48222623 48222915 -41281638 + AluSc SINE Alu 1 289 -20 5443 146 32 27 chr17 48222915 48223864 -41280689 + L1PB1 LINE L1 4656 5599 -552 2387 82 0 0 chr17 48223864 48224169 -41280384 - AluY SINE Alu -6 305 1 5443 146 32 27 chr17 48224169 48224386 -41280167 + L1PB1 LINE L1 5599 5813 -338 2290 88 3 0 chr17 48224386 48224683 -41279870 + AluSp SINE Alu 14 311 -2 5443 146 32 27 chr17 48224683 48224982 -41279571 + L1PB1 LINE L1 5813 6146 -5 2341 93 0 0 chr17 48224997 48225307 -41279246 + AluSx SINE Alu 1 310 -2 2424 67 0 13 chr17 48225309 48225624 -41278929 + AluY SINE Alu 1 311 0 2131 125 0 0 chr17 48225853 48226150 -41278403 - AluSx SINE Alu -15 297 1 2229 108 0 6 chr17 48226531 48226845 -41277708 + AluSx SINE Alu 1 312 0 2420 53 3 0 chr17 48227350 48227651 -41276902 + AluY SINE Alu 1 302 -9 561 105 0 0 chr17 48227651 48227727 -41276826 - AluS SINE Alu -236 77 2 998 165 60 52 chr17 48227731 48227801 -41276752 - L1MB5 LINE L1 0 6166 6098 2119 81 3 66 chr17 48227801 48227928 -41276625 + AluSx SINE Alu 11 144 -168 2364 93 0 0 chr17 48227928 48228238 -41276315 + AluSg SINE Alu 1 310 0 2119 81 3 66 chr17 48228238 48228430 -41276123 + AluSx SINE Alu 144 310 -2 1716 150 12 47 chr17 48228438 48228758 -41275795 + AluJb SINE Alu 1 309 -3 2170 92 0 10 chr17 48228758 48229061 -41275492 + AluSc SINE Alu 1 300 -9 998 165 60 52 chr17 48229061 48229248 -41275305 - L1MB5 LINE L1 -73 6093 5929 219 238 16 16 chr17 48229331 48229394 -41275159 + MIR SINE MIR 17 79 -129 312 179 0 0 chr17 48229623 48229679 -41274874 - MIR SINE MIR -128 134 79 1717 78 0 41 chr17 48229917 48230162 -41274391 - AluSc SINE Alu 0 309 75 2123 100 0 0 chr17 48230252 48230627 -41273926 - AluY SINE Alu 0 375 1 2246 96 0 0 chr17 48230627 48230928 -41273625 - AluSx SINE Alu -11 301 1 2345 59 3 26 chr17 48231858 48232165 -41272388 + AluY SINE Alu 1 300 -11 1928 97 15 0 chr17 48232173 48232440 -41272113 + AluSg SINE Alu 1 271 -39 243 0 0 0 chr17 48232440 48232467 -41272086 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 252 0 0 0 chr17 48232466 48232494 -41272059 + (CA)n Simple_repeat Simple_repeat 1 28 0 854 169 0 0 chr17 48232535 48232677 -41271876 + FLAM_C SINE Alu 1 142 -1 1830 128 60 0 chr17 48232683 48232964 -41271589 + AluJb SINE Alu 1 298 -14 1591 141 99 0 chr17 48233195 48233457 -41271096 - AluSx SINE Alu -24 288 1 2068 62 0 0 chr17 48233468 48233726 -41270827 - AluY SINE Alu -10 301 44 948 58 0 0 chr17 48233826 48233947 -41270606 + AluY SINE Alu 178 298 -13 716 178 52 11 chr17 48233949 48234123 -41270430 - L1MB3 LINE L1 -57 6126 5946 1972 123 0 7 chr17 48234125 48234430 -41270123 - AluSx SINE Alu 0 303 1 388 209 119 130 chr17 48234569 48234667 -41269886 - MER5B DNA MER1_type 0 178 81 2332 83 0 6 chr17 48234667 48234980 -41269573 - AluY SINE Alu 0 311 1 388 209 119 130 chr17 48234980 48235058 -41269495 - MER5B DNA MER1_type -97 81 4 453 36 0 0 chr17 48235454 48235509 -41269044 + (TG)n Simple_repeat Simple_repeat 1 55 0 228 305 34 0 chr17 48235794 48235853 -41268700 + MIR SINE MIR 8 68 -194 2153 127 0 0 chr17 48235853 48236145 -41268408 + AluSx SINE Alu 1 292 -20 2273 88 0 3 chr17 48236150 48236456 -41268097 + AluY SINE Alu 1 305 -6 422 270 86 20 chr17 48236626 48236778 -41267775 - MLT1C LTR MaLR 0 467 306 783 204 0 0 chr17 48236778 48236915 -41267638 - FLAM_C SINE Alu -5 138 2 1145 178 74 58 chr17 48236916 48237049 -41267504 - MLT1C LTR MaLR -153 314 185 2255 94 0 3 chr17 48237049 48237347 -41267206 - AluSp SINE Alu -14 299 3 1145 178 74 58 chr17 48237347 48237522 -41267031 - MLT1C LTR MaLR -282 185 1 303 254 42 0 chr17 48237533 48237604 -41266949 - L2 LINE L2 -47 3266 3193 1402 135 10 0 chr17 48237626 48237833 -41266720 - AluJb SINE Alu -19 293 85 34 24 0 0 chr17 48237836 48237877 -41266676 + AT_rich Low_complexity Low_complexity 1 41 0 2085 124 13 0 chr17 48237877 48238184 -41266369 - AluSq SINE Alu -2 311 1 2195 94 7 3 chr17 48238260 48238569 -41265984 - AluSg SINE Alu 0 310 1 1328 195 25 81 chr17 48238722 48238782 -41265771 + MSTD LTR MaLR 1 63 -365 2108 125 0 0 chr17 48238782 48239077 -41265476 - AluSq SINE Alu -18 295 1 1328 195 25 81 chr17 48239077 48239108 -41265445 + MSTD LTR MaLR 63 94 -334 2036 109 7 3 chr17 48239108 48239402 -41265151 + AluSc SINE Alu 1 295 -14 1328 195 25 81 chr17 48239402 48239704 -41264849 + MSTD LTR MaLR 94 404 -24 224 227 25 160 chr17 48239728 48239785 -41264768 - MIR SINE MIR -146 116 82 923 158 0 0 chr17 48239785 48239918 -41264635 + FLAM_C SINE Alu 1 133 0 224 227 25 160 chr17 48239918 48239979 -41264574 - MIR SINE MIR -180 82 14 2334 86 0 0 chr17 48240012 48240316 -41264237 + AluSg SINE Alu 1 304 -6 226 187 80 0 chr17 48240435 48240470 -41264083 + CT-rich Low_complexity Low_complexity 1 32 -49 786 192 0 0 chr17 48240470 48240600 -41263953 - FLAM_C SINE Alu -3 130 1 226 187 80 0 chr17 48240600 48240639 -41263914 + CT-rich Low_complexity Low_complexity 32 81 0 1756 144 33 30 chr17 48240640 48240815 -41263738 - AluSx SINE Alu -6 306 133 1958 116 26 29 chr17 48240815 48241126 -41263427 - AluSx SINE Alu 0 312 3 2035 113 31 0 chr17 48241128 48241421 -41263132 - AluSx SINE Alu -10 302 1 1756 144 33 30 chr17 48241421 48241547 -41263006 - AluSx SINE Alu -179 133 1 184 283 113 28 chr17 48241597 48241703 -41262850 - L2 LINE L2 -248 3024 2910 254 284 95 35 chr17 48241853 48241969 -41262584 + L2 LINE L2 3191 3313 0 2066 118 0 0 chr17 48242763 48243051 -41261502 + AluSc SINE Alu 1 288 -21 408 152 101 0 chr17 48243173 48243252 -41261301 - AluJ/FLAM SINE Alu -224 88 2 815 180 0 67 chr17 48243264 48243442 -41261111 - FRAM SINE Alu -16 160 1 631 184 0 10 chr17 48243792 48243895 -41260658 + AluJb SINE Alu 2 103 -209 2006 120 0 0 chr17 48243946 48244221 -41260332 + AluSx SINE Alu 1 275 -37 2154 95 13 16 chr17 48244661 48244965 -41259588 + AluSc SINE Alu 2 304 -5 1250 106 0 6 chr17 48244967 48245146 -41259407 + AluSg/x SINE Alu 124 301 -9 2110 106 3 10 chr17 48245330 48245465 -41259088 + AluSx SINE Alu 1 135 -177 2036 118 7 3 chr17 48245465 48245769 -41258784 + AluSp SINE Alu 1 305 -8 2110 106 3 10 chr17 48245769 48245936 -41258617 + AluSx SINE Alu 135 301 -11 2238 97 0 3 chr17 48246688 48246987 -41257566 - AluSc SINE Alu -11 298 1 2103 96 17 0 chr17 48247535 48247826 -41256727 - AluSx SINE Alu -16 296 1 2265 87 3 10 chr17 48250988 48251299 -41253254 + AluSx SINE Alu 1 309 -3 239 341 94 14 chr17 48251299 48251437 -41253116 - MIR SINE MIR -82 180 32 1711 145 0 7 chr17 48251551 48251820 -41252733 + AluSx SINE Alu 38 304 -8 2138 112 7 0 chr17 48251822 48252116 -41252437 + AluSq SINE Alu 1 296 -17 2285 88 3 0 chr17 48252123 48252430 -41252123 + AluSx SINE Alu 1 308 -4 1054 140 12 0 chr17 48252434 48252598 -41251955 + AluSg/x SINE Alu 131 296 -16 242 68 45 0 chr17 48253699 48253743 -41250810 + (TTTAA)n Simple_repeat Simple_repeat 1 46 0 2264 89 0 7 chr17 48253743 48254046 -41250507 - AluSx SINE Alu -11 301 1 1838 141 14 7 chr17 48254086 48254376 -41250177 - AluJb SINE Alu -20 292 1 343 337 103 55 chr17 48254424 48254697 -41249856 - L2 LINE L2 -1 3271 2986 2304 84 0 3 chr17 48254699 48254998 -41249555 + AluSx SINE Alu 9 306 -6 2071 124 7 0 chr17 48255000 48255307 -41249246 + AluSx SINE Alu 3 311 -1 387 97 161 0 chr17 48255327 48255389 -41249164 - MER45 DNA AcHobo 0 1581 1510 902 204 0 11 chr17 48255389 48255565 -41248988 + AluJo SINE Alu 120 293 -19 1574 104 128 16 chr17 48255571 48255850 -41248703 - AluSc SINE Alu 0 307 1 1738 117 34 4 chr17 48255852 48256118 -41248435 - AluSx SINE Alu -17 295 22 2078 96 31 3 chr17 48256281 48256574 -41247979 + AluSx SINE Alu 1 301 -11 262 213 280 0 chr17 48256600 48256675 -41247878 - MER45 DNA AcHobo -1480 101 6 418 284 9 17 chr17 48256789 48256905 -41247648 - L2 LINE L2 -1 3312 3198 234 91 0 0 chr17 48260796 48260829 -41243724 + (GGGGA)n Simple_repeat Simple_repeat 1 33 0 2138 105 10 10 chr17 48261491 48261804 -41242749 - AluSq SINE Alu 0 313 1 710 114 0 0 chr17 48261813 48261918 -41242635 - AluSp/q SINE Alu -1 312 208 287 85 21 0 chr17 48262020 48262067 -41242486 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 1943 165 0 0 chr17 48262067 48262376 -41242177 - AluSx SINE Alu -3 309 1 1809 121 0 83 chr17 48262443 48262757 -41241796 - AluJb SINE Alu -5 307 20 2338 91 0 3 chr17 48262766 48263074 -41241479 - AluSg SINE Alu -3 307 1 2255 53 30 10 chr17 48263076 48263377 -41241176 - AluY SINE Alu -4 307 1 336 321 69 15 chr17 48264081 48264212 -41240341 + L2 LINE L2 3134 3271 -1 2078 125 0 0 chr17 48264290 48264587 -41239966 + AluSx SINE Alu 1 297 -15 203 86 0 29 chr17 48264616 48264651 -41239902 + (GAA)n Simple_repeat Simple_repeat 2 35 0 501 300 56 0 chr17 48265249 48265409 -41239144 + MIR SINE MIR 23 191 -71 24 100 0 0 chr17 48266200 48266280 -41238273 + GC_rich Low_complexity Low_complexity 1 80 0 210 205 0 72 chr17 48266500 48266583 -41237970 + C-rich Low_complexity Low_complexity 2 78 0 28 0 0 0 chr17 48266667 48266695 -41237858 + GC_rich Low_complexity Low_complexity 1 28 0 35 63 0 0 chr17 48266790 48266853 -41237700 + GC_rich Low_complexity Low_complexity 1 63 0 679 279 87 29 chr17 48270251 48270459 -41234094 + MIR SINE MIR 28 247 -15 708 246 35 6 chr17 48271017 48271198 -41233355 + MIR SINE MIR 42 234 -28 207 294 120 33 chr17 48272335 48272427 -41232126 - MIR SINE MIR -63 145 46 399 315 115 6 chr17 48272989 48273154 -41231399 + MIR SINE MIR 60 242 -20 322 250 179 7 chr17 48274878 48275018 -41229535 + MIR SINE MIR 37 200 -62 996 148 53 0 chr17 48276539 48276708 -41227845 + FRAM SINE Alu 1 176 0 261 151 0 0 chr17 48277083 48277136 -41227417 + (TG)n Simple_repeat Simple_repeat 2 54 0 323 308 12 24 chr17 48277357 48277526 -41227027 + (TG)n Simple_repeat Simple_repeat 2 168 0 2238 119 3 0 chr17 48278896 48279206 -41225347 + AluSx SINE Alu 1 311 -1 630 322 153 16 chr17 48279636 48280002 -41224551 - L2 LINE L2 -2 3270 2855 680 199 165 34 chr17 48280121 48280327 -41224226 - MIR SINE MIR -11 251 19 921 141 7 0 chr17 48281193 48281335 -41223218 + FLAM_C SINE Alu 1 143 0 2037 130 0 19 chr17 48281343 48281651 -41222902 + AluSx SINE Alu 1 302 -10 188 311 78 48 chr17 48281671 48281774 -41222779 + L3b LINE CR1 1351 1456 -127 979 245 230 2 chr17 48282538 48282942 -41221611 - L2 LINE L2 0 3313 2818 596 274 158 5 chr17 48283625 48283840 -41220713 + MIR SINE MIR 3 250 -12 2366 132 18 30 chr17 48284182 48284318 -41220235 + L1MB7 LINE L1 5780 5916 -268 2048 108 21 3 chr17 48284318 48284604 -41219949 - AluSx SINE Alu -21 291 1 2366 132 18 30 chr17 48284604 48284861 -41219692 + L1MB7 LINE L1 5916 6168 -16 291 189 0 110 chr17 48286396 48286560 -41217993 + C-rich Low_complexity Low_complexity 1 146 0 237 33 0 0 chr17 48286577 48286607 -41217946 + (CCG)n Simple_repeat Simple_repeat 2 31 0 204 208 83 0 chr17 48287060 48287108 -41217445 - MIR3 SINE MIR -46 162 111 234 332 39 45 chr17 48287218 48287528 -41217025 + L2 LINE L2 2825 3132 -140 21 36 0 0 chr17 48292654 48292682 -41211871 + GC_rich Low_complexity Low_complexity 1 28 0 186 233 23 0 chr17 48293596 48293639 -41210914 - L2 LINE L2 -218 3054 3011 1843 144 3 3 chr17 48293996 48294303 -41210250 - AluJb SINE Alu 0 307 1 190 152 109 43 chr17 48294471 48294517 -41210036 + L2 LINE L2 3264 3312 -1 220 197 15 45 chr17 48294684 48294750 -41209803 + (TCCA)n Simple_repeat Simple_repeat 1 64 0 405 0 0 0 chr17 48294772 48294817 -41209736 + (CA)n Simple_repeat Simple_repeat 2 46 0 833 188 12 6 chr17 48295672 48295837 -41208716 + FRAM SINE Alu 1 166 -10 5012 151 46 13 chr17 48295840 48295887 -41208666 + L1MC1 LINE L1 5287 5331 -1002 1956 158 3 0 chr17 48295887 48296191 -41208362 + AluJo SINE Alu 1 305 -7 5012 151 46 13 chr17 48296191 48296917 -41207636 + L1MC1 LINE L1 5331 6104 -229 2092 113 3 13 chr17 48296917 48297217 -41207336 + AluSx SINE Alu 1 297 -15 5012 151 46 13 chr17 48297217 48297455 -41207098 + L1MC1 LINE L1 6104 6333 0 2088 122 14 0 chr17 48297923 48298218 -41206335 - AluSx SINE Alu -13 299 1 310 288 151 14 chr17 48301122 48301268 -41203285 - MER5A DNA MER1_type -6 183 18 184 289 118 13 chr17 48302074 48302150 -41202403 - MIR SINE MIR -162 100 17 2098 117 0 3 chr17 48303158 48303449 -41201104 - AluSx SINE Alu -22 290 1 1460 215 63 32 chr17 48303453 48303946 -41200607 - L1M4 LINE L1 -1777 4369 3862 607 250 42 17 chr17 48304004 48304048 -41200505 - L1M4 LINE L1 -2246 3900 3859 1674 148 35 0 chr17 48304048 48304331 -41200222 - AluJo SINE Alu -19 293 1 607 250 42 17 chr17 48304331 48304522 -41200031 - L1M4 LINE L1 -2287 3859 3659 776 119 0 0 chr17 48304523 48304632 -41199921 + AluSg/x SINE Alu 190 298 -14 867 129 0 0 chr17 48304633 48304749 -41199804 - AluJo/FLAM SINE Alu -186 116 1 292 269 225 28 chr17 48305022 48305204 -41199349 - MIR SINE MIR -39 223 6 237 300 95 60 chr17 48305323 48305523 -41199030 + L2 LINE L2 2819 3025 -247 1615 140 49 11 chr17 48305609 48305895 -41198658 - AluJo SINE Alu -11 301 5 180 0 0 0 chr17 48308075 48308095 -41196458 + (CCCTG)n Simple_repeat Simple_repeat 4 23 0 208 244 12 34 chr17 48308270 48308372 -41196181 - MIR SINE MIR -54 208 109 2235 108 0 0 chr17 48309956 48310251 -41194302 - AluSx SINE Alu -17 295 1 842 170 0 15 chr17 48312930 48313065 -41191488 - FLAM_A SINE Alu 0 133 1 350 391 121 27 chr17 48313076 48313531 -41191022 - L1ME2 LINE L1 -226 5938 5437 1809 133 37 3 chr17 48313531 48313825 -41190728 - AluJo SINE Alu -8 304 1 350 391 121 27 chr17 48313825 48313858 -41190695 - L1ME2 LINE L1 -727 5437 5408 4239 167 48 5 chr17 48313888 48314709 -41189844 + MER21B LTR ERV1 1 856 -7 209 227 136 0 chr17 48314773 48314839 -41189714 - MIR SINE MIR -81 181 107 2272 100 3 3 chr17 48315848 48316157 -41188396 - AluSx SINE Alu -1 311 3 1826 151 3 26 chr17 48316561 48316872 -41187681 + AluJo SINE Alu 9 312 0 312 313 51 77 chr17 48317090 48317171 -41187382 + L1ME4a LINE L1 5928 6010 -111 2274 116 0 0 chr17 48317171 48317472 -41187081 + AluSx SINE Alu 1 301 -11 312 313 51 77 chr17 48317472 48317585 -41186968 + L1ME4a LINE L1 6010 6117 -4 2581 55 0 13 chr17 48319371 48319683 -41184870 + AluY SINE Alu 3 310 -1 2233 86 0 83 chr17 48319694 48320030 -41184523 + AluSc SINE Alu 1 308 -1 2379 103 0 7 chr17 48320264 48320574 -41183979 - AluSg SINE Alu -2 308 1 2361 95 0 3 chr17 48321031 48321326 -41183227 - AluSx SINE Alu -18 294 1 2486 81 3 7 chr17 48321334 48321641 -41182912 - AluSg SINE Alu -4 306 1 1239 32 0 0 chr17 48321668 48321822 -41182731 - L1PA4 LINE L1 -2 6153 6000 1871 211 107 11 chr17 48322155 48322677 -41181876 + MER119 DNA MER1_type 9 580 -3 316 169 0 31 chr17 48322857 48322922 -41181631 + MIR3 SINE MIR 100 162 -46 625 276 54 9 chr17 48322930 48323151 -41181402 - MIR SINE MIR -1 261 31 1960 124 60 3 chr17 48323193 48323475 -41181078 - AluJb SINE Alu -13 299 2 2527 75 10 0 chr17 48323634 48323940 -41180613 - AluSp SINE Alu -4 309 1 2162 87 35 3 chr17 48323950 48324236 -41180317 - AluY SINE Alu -16 295 1 261 259 102 9 chr17 48324497 48324605 -41179948 + L2 LINE L2 3134 3251 -21 2529 79 0 3 chr17 48324813 48325118 -41179435 - AluSx SINE Alu -8 304 1 2372 98 0 3 chr17 48325128 48325424 -41179129 - AluSx SINE Alu -17 295 1 241 330 52 0 chr17 48325500 48325615 -41178938 + L1MC/D LINE L1 5800 5920 -1888 1234 137 11 0 chr17 48325630 48325805 -41178748 - AluJo SINE Alu -32 280 104 2068 100 48 10 chr17 48325853 48326142 -41178411 - AluSc SINE Alu -9 300 1 2464 82 0 7 chr17 48326151 48326457 -41178096 - AluSg1 SINE Alu -5 304 1 891 152 0 14 chr17 48326605 48326750 -41177803 - FLAM_C SINE Alu 0 143 1 1826 153 73 0 chr17 48326811 48327098 -41177455 + AluJb SINE Alu 5 312 0 550 162 40 0 chr17 48328140 48328239 -41176314 - MER46A DNA MER2_type -133 103 1 194 262 16 16 chr17 48328711 48328772 -41175781 + MIR SINE MIR 13 73 -189 2108 133 3 3 chr17 48329857 48330176 -41174377 + AluSx SINE Alu 1 312 0 2034 128 16 23 chr17 48330193 48330498 -41174055 + AluJo SINE Alu 7 309 -3 306 318 38 52 chr17 48331972 48332183 -41172370 + MIR SINE MIR 54 261 -1 2279 121 0 0 chr17 48332889 48333187 -41171366 - AluSc SINE Alu -10 299 2 273 342 86 0 chr17 48334057 48334174 -41170379 + MIR SINE MIR 133 259 -3 225 0 0 0 chr17 48335809 48335834 -41168719 + (TG)n Simple_repeat Simple_repeat 2 26 0 1954 129 20 14 chr17 48336795 48337090 -41167463 + AluJb SINE Alu 1 297 -15 204 194 0 0 chr17 48337164 48337200 -41167353 + (CACCC)n Simple_repeat Simple_repeat 1 36 0 280 297 50 10 chr17 48337345 48337446 -41167107 - MIR SINE MIR -58 150 46 306 132 0 0 chr17 48338320 48338373 -41166180 + (CA)n Simple_repeat Simple_repeat 1 53 0 287 323 108 13 chr17 48339131 48339289 -41165264 - MER5A DNA MER1_type 0 189 17 466 167 36 2 chr17 48339319 48339480 -41165073 - MER3 DNA MER1_type -3 206 1 277 321 45 0 chr17 48340083 48340195 -41164358 - MIR SINE MIR -63 145 29 213 253 194 75 chr17 48340161 48340347 -41164206 + MIR SINE MIR 49 256 -6 * 2000 145 47 0 chr17 48340755 48341051 -41163502 + AluJo SINE Alu 1 310 -2 212 300 0 0 chr17 48341403 48341463 -41163090 - L2 LINE L2 -3 3269 3210 * 433 307 60 20 chr17 48341453 48341603 -41162950 - MIR SINE MIR 0 262 107 2411 99 3 0 chr17 48342229 48342531 -41162022 - AluSx SINE Alu -9 303 1 266 262 156 34 chr17 48342849 48343086 -41161467 + L1M4 LINE L1 2110 2375 -3771 427 289 108 48 chr17 48343226 48343541 -41161012 - L2 LINE L2 -18 3254 2921 728 211 0 0 chr17 48343783 48343916 -41160637 + FLAM_C SINE Alu 1 133 0 2373 92 3 0 chr17 48344320 48344613 -41159940 + AluSx SINE Alu 1 294 -18 543 262 109 51 chr17 48345339 48345397 -41159156 + HAL1b LINE L1 1187 1240 -108 2078 161 0 3 chr17 48345397 48345695 -41158858 + AluJo SINE Alu 1 297 -15 2426 88 3 0 chr17 48345695 48345990 -41158563 + AluSp SINE Alu 1 297 -16 543 262 109 51 chr17 48345990 48346335 -41158218 + HAL1b LINE L1 1239 1341 -7 1933 166 10 3 chr17 48346341 48346643 -41157910 - AluSx SINE Alu -8 304 1 2311 117 0 0 chr17 48346813 48347120 -41157433 - AluSx SINE Alu -5 307 1 2173 129 0 0 chr17 48347791 48348078 -41156475 + AluSx SINE Alu 1 287 -25 1183 45 0 0 chr17 48348262 48348394 -41156159 - AluY SINE Alu -179 132 1 478 281 89 92 chr17 48348412 48348513 -41156040 - L1MC4a LINE L1 -1889 5919 5819 2237 102 31 0 chr17 48348513 48348806 -41155747 - AluSx SINE Alu 0 312 11 478 281 89 92 chr17 48348806 48349007 -41155546 - L1MC4a LINE L1 -1989 5819 5618 186 250 0 0 chr17 48349206 48349246 -41155307 - L3b LINE CR1 -15 1568 1529 478 326 44 18 chr17 48349291 48349518 -41155035 + MIR SINE MIR 23 255 -7 2579 71 3 0 chr17 48349598 48349908 -41154645 - AluY SINE Alu 0 311 1 1938 140 10 24 chr17 48349909 48350202 -41154351 - AluSx SINE Alu -11 301 13 613 266 107 13 chr17 48350585 48350818 -41153735 - MIR SINE MIR 0 262 8 2216 125 0 0 chr17 48351488 48351787 -41152766 + AluSx SINE Alu 1 300 -7 198 0 0 0 chr17 48351787 48351809 -41152744 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 288 313 12 0 chr17 48352717 48352800 -41151753 - L2 LINE L2 -1 3271 3188 1474 184 7 71 chr17 48353023 48353184 -41151369 - AluJo SINE Alu -19 293 160 2187 112 10 0 chr17 48353184 48353478 -41151075 - AluSx SINE Alu -14 298 2 1474 184 7 71 chr17 48353478 48353625 -41150928 - AluJo SINE Alu -152 160 5 2411 82 3 13 chr17 48354540 48354846 -41149707 - AluSc SINE Alu -6 303 1 418 235 10 20 chr17 48355579 48355681 -41148872 + MIR SINE MIR 38 138 -70 687 156 16 23 chr17 48357092 48357220 -41147333 - FLAM_A SINE Alu -6 127 1 372 94 0 0 chr17 48357770 48357823 -41146730 + (CTA)n Simple_repeat Simple_repeat 3 55 0 234 81 0 0 chr17 48357825 48357862 -41146691 + (CAA)n Simple_repeat Simple_repeat 2 38 0 523 282 58 0 chr17 48357880 48358054 -41146499 - MIR SINE MIR -32 230 47 212 286 57 0 chr17 48358106 48358176 -41146377 + MIR SINE MIR 76 149 -113 21 57 0 0 chr17 48358215 48358250 -41146303 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 48361143 48361172 -41143381 + GC_rich Low_complexity Low_complexity 1 29 0 213 262 119 12 chr17 48362109 48362193 -41142360 - L2 LINE L2 -20 3252 3160 1405 170 93 11 chr17 48362524 48362794 -41141759 + AluJo SINE Alu 1 292 -20 232 315 0 0 chr17 48362919 48362973 -41141580 + L3 LINE CR1 1414 1467 -110 244 268 21 82 chr17 48363085 48363182 -41141371 + Charlie8 DNA MER1_type 1 91 -2326 239 170 21 0 chr17 48363242 48363289 -41141264 + Charlie8 DNA MER1_type 1370 1417 -1000 228 313 0 12 chr17 48363290 48363370 -41141183 + MIR SINE MIR 21 99 -163 1082 160 22 53 chr17 48364333 48364399 -41140154 - MER20 DNA MER1_type 0 219 152 1870 139 46 52 chr17 48364399 48364723 -41139830 - THE1B LTR MaLR 0 364 41 2143 131 27 0 chr17 48364723 48365021 -41139532 - AluSx SINE Alu -6 306 1 1870 139 46 52 chr17 48365021 48365062 -41139491 - THE1B LTR MaLR -323 41 1 1082 160 22 53 chr17 48365062 48365220 -41139333 - MER20 DNA MER1_type -67 152 2 543 215 71 9 chr17 48365228 48365390 -41139163 - MIR SINE MIR -62 146 4 647 237 58 0 chr17 48365903 48366042 -41138511 - MER63 DNA MER1_type -289 773 1 183 254 32 0 chr17 48366802 48366865 -41137688 - L2 LINE L2 -49 3264 3200 627 232 237 80 chr17 48366937 48366983 -41137570 - LTR33A LTR ERVL -2 521 484 742 138 0 36 chr17 48366983 48367121 -41137432 - FLAM_C SINE Alu 0 133 1 627 232 237 80 chr17 48367121 48367137 -41137416 - LTR33A LTR ERVL -39 484 472 2426 96 0 6 chr17 48367137 48367449 -41137104 - AluSx SINE Alu -2 310 1 627 232 237 80 chr17 48367449 48367833 -41136720 - LTR33A LTR ERVL -51 472 4 318 215 0 0 chr17 48367938 48368003 -41136550 + L2 LINE L2 3249 3313 0 228 270 90 10 chr17 48368002 48368102 -41136451 - L2 LINE L2 -1106 2208 2101 * 1769 91 5 0 chr17 48368105 48368326 -41136227 + AluSq SINE Alu 1 222 -91 260 311 158 16 chr17 48368417 48368607 -41135946 + L2 LINE L2 2201 2417 -897 287 339 48 36 chr17 48368799 48368967 -41135586 + L2 LINE L2 2720 2889 -425 2392 101 0 3 chr17 48369252 48369559 -41134994 + AluSx SINE Alu 1 306 -6 2412 97 3 0 chr17 48369793 48370103 -41134450 + AluSx SINE Alu 1 311 -1 502 245 136 79 chr17 48370128 48370585 -41133968 + MLT1J LTR MaLR 29 511 0 2428 68 0 10 chr17 48370686 48370979 -41133574 + AluSc SINE Alu 1 290 -19 261 299 86 0 chr17 48371367 48371484 -41133069 - MER113 DNA MER1_type? -4 517 391 2359 112 0 0 chr17 48371585 48371897 -41132656 - AluSx SINE Alu 0 312 1 692 78 0 0 chr17 48371921 48372011 -41132542 - 5S rRNA rRNA -31 90 1 484 273 126 31 chr17 48372012 48372338 -41132215 - L1MC4a LINE L1 -1785 6023 5667 570 239 15 15 chr17 48372344 48372474 -41132079 - L2 LINE L2 0 3313 3184 1025 187 43 148 chr17 48372508 48372564 -41131989 - MER113 DNA MER1_type? -125 396 336 2430 81 0 10 chr17 48372564 48372872 -41131681 - AluSx SINE Alu -2 310 6 1025 187 43 148 chr17 48372872 48373120 -41131433 - MER113 DNA MER1_type? -185 336 149 2178 136 0 3 chr17 48373120 48373430 -41131123 - AluJo SINE Alu -3 309 1 1025 187 43 148 chr17 48373430 48373563 -41130990 - MER113 DNA MER1_type? -372 149 4 2319 98 3 0 chr17 48373783 48374079 -41130474 - AluSg SINE Alu -12 298 2 2278 101 0 3 chr17 48374788 48375085 -41129468 - AluSg SINE Alu -14 296 1 1792 174 112 27 chr17 48375114 48375196 -41129357 - Charlie1b DNA MER1_type -2238 523 449 856 172 48 137 chr17 48375196 48375314 -41129239 + MER63A DNA MER1_type 4 94 -1594 1419 88 292 12 chr17 48375314 48375554 -41128999 - AluSg1 SINE Alu -2 307 1 856 172 48 137 chr17 48375554 48375662 -41128891 + MER63A DNA MER1_type 94 210 0 1792 174 112 27 chr17 48375662 48376061 -41128492 - Charlie1b DNA MER1_type -2312 449 1 524 221 79 8 chr17 48376061 48376188 -41128365 - MIR SINE MIR -64 198 63 923 152 0 0 chr17 48376188 48376320 -41128233 + FLAM_C SINE Alu 1 132 -11 2087 135 34 0 chr17 48376346 48376643 -41127910 + AluSx SINE Alu 1 307 -5 196 188 0 0 chr17 48376643 48376675 -41127878 - MIR SINE MIR -190 72 41 254 224 45 15 chr17 48376701 48376768 -41127785 + MIR SINE MIR 67 135 -127 227 364 68 15 chr17 48376913 48377045 -41127508 + L2 LINE L2 3175 3313 0 191 200 0 0 chr17 48377680 48377720 -41126833 + MIR3 SINE MIR 162 201 -7 481 321 36 6 chr17 48378565 48378730 -41125823 + L2 LINE L2 3102 3271 -1 408 239 106 0 chr17 48378923 48379036 -41125517 - L2 LINE L2 0 3272 3148 1694 220 17 3 chr17 48379158 48379513 -41125040 - LTR16A LTR ERVL -1 449 90 2167 136 0 3 chr17 48379770 48380079 -41124474 - AluJo SINE Alu -4 308 1 280 269 60 45 chr17 48380201 48380335 -41124218 + L2 LINE L2 2482 2617 -697 605 232 160 21 chr17 48380563 48380757 -41123796 + MIR SINE MIR 8 228 -34 332 132 0 19 chr17 48380877 48380930 -41123623 - L2 LINE L2 0 3313 3262 224 297 9 36 chr17 48381365 48381476 -41123077 + GA-rich Low_complexity Low_complexity 1 108 0 558 288 56 0 chr17 48381494 48381654 -41122899 - MIR SINE MIR -59 203 35 384 22 0 0 chr17 48381730 48381775 -41122778 + (TG)n Simple_repeat Simple_repeat 2 46 0 2245 91 3 11 chr17 48381841 48382151 -41122402 + AluSx SINE Alu 1 308 0 892 110 0 0 chr17 48382160 48382278 -41122275 - FRAM SINE Alu -37 139 22 236 312 138 9 chr17 48382476 48382585 -41121968 + MIR SINE MIR 66 188 -74 214 152 22 65 chr17 48382753 48382799 -41121754 - MIR SINE MIR -57 151 108 700 182 53 81 chr17 48383347 48383517 -41121036 + ORSL DNA AcHobo 36 198 -77 1722 157 7 7 chr17 48383517 48383791 -41120762 + AluJo SINE Alu 18 291 -21 700 182 53 81 chr17 48383791 48383867 -41120686 + ORSL DNA AcHobo 198 275 0 263 254 16 0 chr17 48383973 48384036 -41120517 + MIR SINE MIR 102 165 -97 1926 134 3 11 chr17 48384040 48384355 -41120198 - AluSx SINE Alu 0 313 1 428 222 29 51 chr17 48384642 48384822 -41119731 - MIR SINE MIR -62 146 25 2079 120 3 13 chr17 48385181 48385480 -41119073 - AluSx SINE Alu -5 307 12 1894 140 0 21 chr17 48385492 48385804 -41118749 - AluJo SINE Alu 0 308 3 190 356 31 49 chr17 48385897 48386060 -41118493 + L3b LINE CR1 1336 1495 -88 252 287 93 0 chr17 48386625 48386733 -41117820 + L2 LINE L2 3146 3263 -9 271 324 40 27 chr17 48386844 48386992 -41117561 + MIR SINE MIR 95 244 -18 450 194 0 0 chr17 48387302 48387369 -41117184 - AluJ/FLAM SINE Alu -244 68 2 306 273 109 39 chr17 48387429 48387557 -41116996 + MIR3 SINE MIR 1 137 -71 860 230 55 14 chr17 48387728 48387945 -41116608 + MIR SINE MIR 5 230 -32 798 244 11 0 chr17 48388103 48388279 -41116274 - MIR SINE MIR -6 256 79 2114 108 0 4 chr17 48388360 48388665 -41115888 - AluSg SINE Alu 0 307 4 300 164 18 0 chr17 48388686 48388741 -41115812 - MER5B DNA MER1_type -3 175 120 1028 154 0 55 chr17 48388741 48388923 -41115630 + AluJo SINE Alu 87 258 -54 369 219 0 37 chr17 48388925 48389007 -41115546 - MER5B DNA MER1_type -61 117 39 2591 59 0 3 chr17 48389011 48389314 -41115239 + AluY SINE Alu 1 302 -9 243 0 0 0 chr17 48389344 48389371 -41115182 + (CA)n Simple_repeat Simple_repeat 1 27 0 212 214 0 0 chr17 48389383 48389425 -41115128 - MER5B DNA MER1_type -136 42 1 899 116 0 36 chr17 48389630 48389768 -41114785 - FLAM_C SINE Alu 0 133 1 317 244 130 35 chr17 48389845 48389960 -41114593 + MIR SINE MIR 19 144 -64 361 229 21 10 chr17 48391267 48391363 -41113190 + MER96B DNA MER1_type? 321 417 0 331 262 37 0 chr17 48391544 48391651 -41112902 - MER103 DNA DNA -2 164 54 287 284 26 71 chr17 48391742 48391781 -41112772 + MER5A DNA MER1_type 36 75 -114 2126 117 69 0 chr17 48391781 48392071 -41112482 + AluSx SINE Alu 1 310 -2 287 284 26 71 chr17 48392071 48392186 -41112367 + MER5A DNA MER1_type 75 183 -6 468 148 99 10 chr17 48392281 48392382 -41112171 + L1MB8 LINE L1 3620 3729 -2417 6210 140 21 17 chr17 48392432 48392705 -41111848 + L1PB2 LINE L1 4121 4391 -1760 198 0 0 0 chr17 48392705 48392727 -41111826 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 6210 140 21 17 chr17 48392727 48394382 -41110171 + L1PB2 LINE L1 4391 6057 -94 207 339 0 0 chr17 48394382 48394550 -41110003 + (CACTA)n Simple_repeat Simple_repeat 4 171 0 478 137 116 0 chr17 48394588 48394683 -41109870 + L1PB3 LINE L1 6043 6148 -6 36 23 0 0 chr17 48394704 48394747 -41109806 + AT_rich Low_complexity Low_complexity 1 43 0 6814 189 44 11 chr17 48394747 48397059 -41107494 + L1MB8 LINE L1 3739 6125 -53 994 201 5 11 chr17 48397062 48397246 -41107307 - AluJb SINE Alu -1 311 129 2388 85 0 0 chr17 48397253 48397546 -41107007 - AluSx SINE Alu -19 293 1 427 87 0 14 chr17 48397546 48397615 -41106938 + L1MB8 LINE L1 6111 6178 0 572 280 50 28 chr17 48397993 48398211 -41106342 - MLT1J LTR MaLR -2 509 287 1962 100 27 0 chr17 48398235 48398355 -41106198 + AluSg SINE Alu 1 116 -194 243 0 0 0 chr17 48398355 48398382 -41106171 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1962 100 27 0 chr17 48398382 48398520 -41106033 + AluSg SINE Alu 116 266 -44 189 0 0 0 chr17 48398521 48398542 -41106011 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 428 269 117 48 chr17 48398568 48398661 -41105892 - L2 LINE L2 -1549 1765 1680 2075 107 6 63 chr17 48398661 48398979 -41105574 - AluSx SINE Alu -12 300 1 428 269 117 48 chr17 48398979 48399175 -41105378 - L2 LINE L2 -1634 1680 1456 411 148 0 0 chr17 48399224 48399312 -41105241 + (CCTG)n Simple_repeat Simple_repeat 2 89 0 826 261 12 45 chr17 48399322 48399567 -41104986 - L2 LINE L2 0 3313 3077 * 1304 292 70 52 chr17 48399556 48400001 -41104552 - L2 LINE L2 -2307 1007 541 2094 122 6 16 chr17 48400001 48400313 -41104240 - AluSx SINE Alu -3 309 1 1304 292 70 52 chr17 48400313 48400623 -41103930 - L2 LINE L2 -2773 541 238 2463 65 0 46 chr17 48400755 48401080 -41103473 - AluSg SINE Alu 0 310 1 278 276 32 8 chr17 48401155 48401278 -41103275 - L1MC4 LINE L1 -1 8041 7916 540 178 0 0 chr17 48401289 48401396 -41103157 + (TCCA)n Simple_repeat Simple_repeat 2 108 0 266 227 13 0 chr17 48401407 48401482 -41103071 - L1MC4 LINE L1 -138 7904 7829 3183 190 64 74 chr17 48401513 48401655 -41102898 - L1ME2 LINE L1 0 6164 6022 2029 94 4 0 chr17 48401655 48401909 -41102644 + AluSp SINE Alu 47 301 -12 3183 190 64 74 chr17 48401909 48402988 -41101565 - L1ME2 LINE L1 -142 6022 4933 1993 137 28 0 chr17 48402988 48403273 -41101280 + AluJb SINE Alu 1 293 -19 3183 190 64 74 chr17 48403273 48403488 -41101065 - L1ME2 LINE L1 -1231 4933 4717 1814 185 10 0 chr17 48403488 48403785 -41100768 + AluJo SINE Alu 1 300 -12 3183 190 64 74 chr17 48403785 48403905 -41100648 - L1ME2 LINE L1 -1447 4717 4597 1583 73 0 0 chr17 48403905 48404109 -41100444 - L1PA3 LINE L1 0 6155 5952 3183 190 64 74 chr17 48404109 48404361 -41100192 - L1ME2 LINE L1 -1567 4597 4377 2672 43 0 0 chr17 48404378 48404681 -41099872 + AluY SINE Alu 1 303 -8 937 154 0 0 chr17 48404681 48404811 -41099742 - AluJo/FLAM SINE Alu -181 131 2 2037 94 50 27 chr17 48404816 48405115 -41099438 - AluSq SINE Alu -7 306 1 2060 141 0 3 chr17 48405671 48405969 -41098584 + AluSx SINE Alu 1 297 -15 773 243 171 36 chr17 48406380 48406713 -41097840 - MLT1J2 LTR MaLR -8 442 65 2309 115 33 36 chr17 48407463 48407828 -41096725 + THE1B LTR MaLR 1 364 0 694 271 23 41 chr17 48407828 48408046 -41096507 - MIR SINE MIR -21 241 28 432 299 46 72 chr17 48408139 48408487 -41096066 + MLT1I LTR MaLR 71 409 0 2319 90 3 17 chr17 48408628 48408928 -41095625 + AluSx SINE Alu 1 296 -16 2395 90 16 13 chr17 48409713 48410024 -41094529 + AluSx SINE Alu 1 312 0 207 0 0 0 chr17 48410027 48410050 -41094503 + (GAAA)n Simple_repeat Simple_repeat 1 23 0 732 11 0 0 chr17 48410053 48410141 -41094412 + L1PA3 LINE L1 6068 6155 0 1261 58 17 0 chr17 48410147 48410321 -41094232 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 367 313 44 6 chr17 48410427 48410587 -41093966 - MLT1K LTR MaLR -401 187 22 413 338 51 42 chr17 48410607 48410844 -41093709 - L2 LINE L2 -119 3153 2915 336 276 98 9 chr17 48411525 48411666 -41092887 + MIR SINE MIR 38 188 -69 298 271 39 8 chr17 48412289 48412418 -41092135 - Charlie7 DNA MER1_type -29 2583 2451 233 192 0 0 chr17 48412497 48412549 -41092004 + L1MB8 LINE L1 5279 5330 -816 1970 146 0 0 chr17 48412554 48412829 -41091724 + AluSx SINE Alu 3 277 -35 2795 187 78 57 chr17 48412863 48412936 -41091617 + L1MB8 LINE L1 5317 5387 -791 1826 151 7 17 chr17 48412936 48413228 -41091325 + AluJo SINE Alu 12 300 -12 2795 187 78 57 chr17 48413228 48413644 -41090909 + L1MB8 LINE L1 5387 5834 -344 2272 123 0 0 chr17 48413644 48413954 -41090599 + AluSx SINE Alu 1 310 -2 2795 187 78 57 chr17 48413954 48414307 -41090246 + L1MB8 LINE L1 5834 6178 0 241 229 9 95 chr17 48414290 48414353 -41090200 + L1MC/D LINE L1 5802 5854 -1954 * 2208 120 0 10 chr17 48414353 48414654 -41089899 - AluSx SINE Alu -14 298 1 241 229 9 95 chr17 48414654 48414695 -41089858 + L1MC/D LINE L1 5854 5897 -1911 1281 94 11 0 chr17 48414728 48414908 -41089645 - AluSq SINE Alu 0 313 132 2347 89 6 10 chr17 48414908 48415221 -41089332 - AluSx SINE Alu 0 312 1 2636 152 55 4 chr17 48415434 48415921 -41088632 - L1MB3 LINE L1 0 6183 5672 657 170 0 28 chr17 48415930 48416071 -41088482 - FLAM_C SINE Alu -5 138 2 612 256 48 82 chr17 48416643 48416913 -41087640 + MER46C DNA MER2_type 78 338 0 209 247 129 0 chr17 48416913 48416998 -41087555 - MIR SINE MIR -111 151 56 589 285 21 0 chr17 48417197 48417341 -41087212 + MIR SINE MIR 13 159 -103 2503 89 0 0 chr17 48417344 48417648 -41086905 + AluSx SINE Alu 1 304 -8 313 303 106 7 chr17 48417887 48418029 -41086524 - MIR3 SINE MIR -23 185 30 2216 111 10 0 chr17 48418808 48419114 -41085439 + AluSx SINE Alu 1 309 -3 233 73 0 24 chr17 48419340 48419381 -41085172 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2067 130 13 0 chr17 48419384 48419692 -41084861 - AluSx SINE Alu 0 312 1 1840 152 0 26 chr17 48419694 48419996 -41084557 - AluJo SINE Alu -16 296 3 657 227 0 8 chr17 48420053 48420185 -41084368 + L2 LINE L2 3183 3313 0 206 290 10 80 chr17 48420244 48420344 -41084209 + MIR SINE MIR 123 215 -47 226 127 0 55 chr17 48420666 48420721 -41083832 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 674 325 181 7 chr17 48421389 48421428 -41083125 + L2 LINE L2 489 520 -2794 1808 147 3 32 chr17 48421428 48421599 -41082954 - AluJo SINE Alu -8 304 145 2162 103 0 3 chr17 48421599 48421889 -41082664 - AluSc SINE Alu -20 289 1 1808 147 3 32 chr17 48421889 48422030 -41082523 - AluJo SINE Alu -167 145 1 674 325 181 7 chr17 48422030 48422664 -41081889 + L2 LINE L2 520 1279 -2035 356 326 68 42 chr17 48422903 48423167 -41081386 + L2 LINE L2 2692 2962 -352 198 302 19 0 chr17 48423287 48423340 -41081213 + L2 LINE L2 3255 3308 -5 372 309 40 46 chr17 48423638 48423790 -41080763 - L2 LINE L2 -4 3309 3159 2019 133 3 0 chr17 48424330 48424623 -41079930 + AluSx SINE Alu 2 295 -17 225 234 194 16 chr17 48425148 48425272 -41079281 - L2 LINE L2 -238 3034 2889 382 277 55 34 chr17 48425373 48425513 -41079040 - MIR SINE MIR -68 140 2 2156 112 0 10 chr17 48425675 48425987 -41078566 - AluSq SINE Alu -3 310 2 1549 134 0 93 chr17 48426079 48426392 -41078161 + AluJb SINE Alu 8 291 -21 1943 226 116 14 chr17 48426520 48427179 -41077374 - L1ME3 LINE L1 -148 6014 5274 1943 128 52 0 chr17 48427179 48427468 -41077085 - AluSx SINE Alu -8 304 1 1943 226 116 14 chr17 48427468 48427534 -41077019 - L1ME3 LINE L1 -888 5274 5216 629 256 89 67 chr17 48427534 48427925 -41076628 + MER113 DNA MER1_type? 120 519 -2 2479 66 0 0 chr17 48428200 48428504 -41076049 - AluY SINE Alu -7 304 1 357 24 0 0 chr17 48428643 48428685 -41075868 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 300 322 35 9 chr17 48428685 48428800 -41075753 - L2 LINE L2 -37 3276 3159 205 367 133 8 chr17 48428799 48429039 -41075514 - L2 LINE L2 -993 2321 2052 * 1599 248 55 22 chr17 48430458 48431003 -41073550 + L1MD2 LINE L1 5795 6357 -2 376 282 157 5 chr17 48431608 48431794 -41072759 - MIR SINE MIR -36 226 14 2335 64 10 0 chr17 48431817 48432112 -41072441 - AluY SINE Alu -13 298 1 413 337 109 27 chr17 48432114 48432568 -41071985 - L2 LINE L2 -24 3289 2787 * 679 342 53 0 chr17 48432520 48432748 -41071805 - MIR SINE MIR -21 241 2 973 328 179 19 chr17 48432762 48433756 -41070797 - L2 LINE L2 -516 2798 1646 720 265 129 38 chr17 48433776 48434172 -41070381 + LTR16A LTR ERVL 19 450 0 1270 184 25 94 chr17 48434419 48434594 -41069959 + L1MB7 LINE L1 5491 5677 -507 1656 193 71 28 chr17 48434594 48434947 -41069606 + MLT1A2 LTR MaLR 5 372 -2 1270 184 25 94 chr17 48434947 48435025 -41069528 + L1MB7 LINE L1 5677 5759 -425 2109 109 0 35 chr17 48435025 48435337 -41069216 + AluSg1 SINE Alu 1 301 -8 1270 184 25 94 chr17 48435337 48435434 -41069119 + L1MB7 LINE L1 5759 5814 -370 1770 171 14 0 chr17 48435434 48435747 -41068806 + AluJb SINE Alu 1 317 0 1270 184 25 94 chr17 48435747 48435796 -41068757 + L1MB7 LINE L1 5814 5865 -319 1876 161 43 0 chr17 48436541 48436840 -41067713 + AluJb SINE Alu 1 312 0 183 333 13 26 chr17 48437184 48437262 -41067291 - L2 LINE L2 -4 3309 3233 226 341 148 15 chr17 48437312 48437447 -41067106 + MIR3 SINE MIR 53 205 -3 398 277 78 19 chr17 48437578 48437832 -41066721 + L2 LINE L2 2776 3044 -228 1599 229 52 7 chr17 48438027 48438549 -41066004 + MER115 DNA AcHobo 93 693 0 199 351 156 0 chr17 48438656 48438733 -41065820 + MIR SINE MIR 174 262 0 308 268 42 0 chr17 48439187 48439258 -41065295 + MIR SINE MIR 77 150 -58 666 309 95 24 chr17 48441850 48442187 -41062366 - L3 LINE CR1 -462 1115 755 368 304 10 0 chr17 48442734 48442836 -41061717 - MIR SINE MIR -96 166 64 2350 89 0 0 chr17 48442967 48443270 -41061283 + AluSg SINE Alu 1 303 -7 2095 100 0 0 chr17 48443824 48444138 -41060415 + AluY SINE Alu 1 314 0 1439 223 17 3 chr17 48444398 48444699 -41059854 + AluJo SINE Alu 1 305 -7 1946 137 0 0 chr17 48445146 48445424 -41059129 + AluSx SINE Alu 1 278 -34 189 159 0 0 chr17 48445425 48445469 -41059084 + (TAA)n Simple_repeat Simple_repeat 3 46 0 345 172 70 134 chr17 48445488 48445573 -41058980 - MER117 DNA MER1_type -50 147 75 1886 168 10 0 chr17 48445573 48445882 -41058671 + AluJo SINE Alu 1 312 0 345 172 70 134 chr17 48445882 48445953 -41058600 - MER117 DNA MER1_type -122 75 1 353 271 213 0 chr17 48447047 48447169 -41057384 - L3 LINE CR1 -546 1031 884 2061 129 30 0 chr17 48447791 48448093 -41056460 + AluSx SINE Alu 1 311 -1 452 305 123 21 chr17 48448305 48448492 -41056061 + MIR SINE MIR 13 218 -44 339 231 0 51 chr17 48450632 48450749 -41053804 + L1ME4a LINE L1 5981 6091 -30 256 303 60 4 chr17 48450856 48451003 -41053550 + MIR SINE MIR 75 229 -33 22 35 0 0 chr17 48451025 48451054 -41053499 + AT_rich Low_complexity Low_complexity 1 29 0 720 115 0 0 chr17 48451174 48451270 -41053283 - AluSg/x SINE Alu -19 290 195 240 276 83 60 chr17 48451671 48451888 -41052665 + L2 LINE L2 2838 3059 -213 2339 93 3 0 chr17 48452016 48452327 -41052226 - AluSx SINE Alu 0 312 1 262 274 65 16 chr17 48452401 48452525 -41052028 + L1ME4a LINE L1 5980 6109 -12 503 309 114 21 chr17 48452723 48452959 -41051594 - L2 LINE L2 0 3313 3056 359 346 48 48 chr17 48453112 48453508 -41051045 + L2 LINE L2 2864 3259 -13 437 278 144 6 chr17 48453987 48454160 -41050393 + L3 LINE CR1 1370 1566 -11 239 0 0 31 chr17 48456309 48456341 -41048212 + (CA)n Simple_repeat Simple_repeat 1 31 0 320 282 38 23 chr17 48457331 48457462 -41047091 - MER5B DNA MER1_type -43 135 3 2160 108 3 0 chr17 48457481 48457778 -41046775 - AluSx SINE Alu 0 312 15 278 355 71 6 chr17 48457891 48458060 -41046493 + MIR SINE MIR 13 192 -70 2322 97 0 0 chr17 48458337 48458636 -41045917 + AluSx SINE Alu 1 299 -13 1186 132 0 52 chr17 48458956 48459168 -41045385 - AluJo SINE Alu -17 295 95 1340 82 5 11 chr17 48459668 48459852 -41044701 + AluSp SINE Alu 118 300 -13 2061 132 0 0 chr17 48459860 48460155 -41044398 + AluSx SINE Alu 1 295 -17 1975 121 46 0 chr17 48460165 48460446 -41044107 + AluSx SINE Alu 3 296 -16 2129 71 60 3 chr17 48460450 48460733 -41043820 + AluY SINE Alu 1 299 -12 820 201 0 0 chr17 48460785 48460924 -41043629 - FLAM_C SINE Alu -4 139 1 198 71 0 0 chr17 48460944 48460972 -41043581 + (A)n Simple_repeat Simple_repeat 1 28 0 1044 122 0 0 chr17 48461022 48461169 -41043384 + AluJb SINE Alu 156 302 -10 1026 274 123 38 chr17 48461822 48462950 -41041603 + L1MCa LINE L1 1843 5672 -754 2458 50 10 0 chr17 48463329 48463628 -41040925 + AluY SINE Alu 1 302 -9 2019 136 3 10 chr17 48463856 48464166 -41040387 + AluJb SINE Alu 3 310 -2 384 338 50 35 chr17 48464335 48464533 -41040020 + L1MDa LINE L1 2406 2606 -3934 2062 139 0 19 chr17 48464541 48464858 -41039695 + AluSx SINE Alu 1 311 -1 1057 161 0 60 chr17 48464870 48465087 -41039466 + AluJb SINE Alu 92 295 -17 761 317 91 63 chr17 48465096 48465556 -41038997 + L1M4 LINE L1 983 1429 -2812 2091 90 47 10 chr17 48465556 48465857 -41038696 + AluSx SINE Alu 1 312 0 761 317 91 63 chr17 48465857 48466067 -41038486 + L1M4 LINE L1 1429 2907 -1334 189 0 0 0 chr17 48466243 48466264 -41038289 + (CATAT)n Simple_repeat Simple_repeat 1 21 0 313 311 114 0 chr17 48466265 48466432 -41038121 + L2 LINE L2 3123 3308 -5 1643 72 9 22 chr17 48467255 48467478 -41037075 + L1PB1 LINE L1 5928 6147 -4 291 258 21 10 chr17 48468806 48468903 -41035650 + MIR SINE MIR 30 127 -81 255 295 172 0 chr17 48468958 48469080 -41035473 + L2 LINE L2 3108 3250 -22 181 299 39 0 chr17 48470317 48470394 -41034159 - MIR SINE MIR -99 163 84 239 252 39 39 chr17 48471338 48471441 -41033112 - MIR3 SINE MIR -39 169 67 1183 245 79 16 chr17 48471793 48472111 -41032442 - MER46C DNA MER2_type 0 338 1 22 35 0 0 chr17 48472474 48472503 -41032050 + GC_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr17 48472606 48472642 -41031911 + GC_rich Low_complexity Low_complexity 1 36 0 274 194 326 0 chr17 48473013 48473142 -41031411 + MIR3 SINE MIR 27 192 -16 222 254 0 0 chr17 48474632 48474687 -41029866 + C-rich Low_complexity Low_complexity 1 55 0 249 269 10 29 chr17 48475294 48475398 -41029155 + C-rich Low_complexity Low_complexity 5 106 0 2171 72 0 63 chr17 48476486 48476817 -41027736 + AluY SINE Alu 2 311 0 409 277 109 27 chr17 48476916 48477100 -41027453 + MIR SINE MIR 34 232 -30 2073 105 7 0 chr17 48477114 48477400 -41027153 - AluSx SINE Alu -22 290 3 979 106 14 0 chr17 48477505 48477646 -41026907 + AluSg/x SINE Alu 160 302 -8 410 311 68 21 chr17 48480695 48480885 -41023668 + MER112 DNA MER1_type 13 211 -49 2274 81 3 0 chr17 48480910 48481206 -41023347 + AluY SINE Alu 1 297 -14 2160 110 13 0 chr17 48481207 48481515 -41023038 - AluSx SINE Alu 0 312 1 444 258 191 34 chr17 48483024 48483202 -41021351 + MIR SINE MIR 44 249 -13 935 227 49 0 chr17 48483235 48483438 -41021115 - MIR SINE MIR -36 226 14 207 353 97 23 chr17 48484920 48485050 -41019503 + L2 LINE L2 2545 2664 -650 2145 113 3 0 chr17 48485050 48485359 -41019194 - AluSx SINE Alu -2 310 1 207 353 97 23 chr17 48485359 48485486 -41019067 + L2 LINE L2 2664 2821 -493 249 209 30 45 chr17 48485834 48485901 -41018652 + L2 LINE L2 3014 3079 -193 257 279 59 0 chr17 48486006 48486074 -41018479 - MIR SINE MIR -63 145 74 325 270 126 18 chr17 48487233 48487455 -41017098 + L2 LINE L2 2811 3056 -216 208 420 7 7 chr17 48487633 48487783 -41016770 + L2 LINE L2 3164 3313 0 280 298 0 0 chr17 48487901 48488089 -41016464 + (TG)n Simple_repeat Simple_repeat 1 188 0 562 268 8 0 chr17 48488415 48488542 -41016011 - MIR SINE MIR -62 146 19 217 286 0 18 chr17 48489019 48489075 -41015478 - MIR SINE MIR -62 146 92 401 250 116 30 chr17 48489251 48489418 -41015135 - L1 LINE L1 -1697 4449 4280 501 281 43 12 chr17 48489425 48489589 -41014964 + MIR SINE MIR 6 174 -88 255 330 9 38 chr17 48489666 48489772 -41014781 + MIR SINE MIR 159 261 -1 2143 96 7 7 chr17 48490446 48490748 -41013805 - AluSp SINE Alu -11 302 1 367 192 154 19 chr17 48491331 48491435 -41013118 - MIR SINE MIR -80 182 65 387 309 95 17 chr17 48491447 48491742 -41012811 + L1ME4a LINE L1 5793 6110 -11 368 275 7 0 chr17 48491882 48492031 -41012522 + (CCCA)n Simple_repeat Simple_repeat 1 150 0 1666 127 23 47 chr17 48492425 48492724 -41011829 + AluSx SINE Alu 12 303 -9 354 290 108 36 chr17 48493426 48493674 -41010879 + L1MC5 LINE L1 7505 7846 -196 2417 47 3 28 chr17 48493674 48493993 -41010560 - AluY SINE Alu 0 311 1 354 290 108 36 chr17 48493993 48494079 -41010474 + L1MC5 LINE L1 7846 7924 -118 200 244 0 0 chr17 48494080 48494121 -41010432 + T-rich Low_complexity Low_complexity 1 41 0 1328 110 0 5 chr17 48494185 48494376 -41010177 - AluSg/x SINE Alu -9 300 111 2295 80 0 3 chr17 48494602 48494903 -41009650 - AluSq SINE Alu -13 300 1 1563 193 86 8 chr17 48494954 48495316 -41009237 - L1ME1 LINE L1 -297 5869 5480 1975 59 33 4 chr17 48495317 48495587 -41008966 - AluY SINE Alu 0 311 34 849 168 25 36 chr17 48495688 48495884 -41008669 + L1MA4 LINE L1 6106 6299 -1 772 146 171 10 chr17 48495991 48496190 -41008363 + MER58B DNA MER1_type 105 335 -6 813 177 29 140 chr17 48496194 48496418 -41008135 + L1MC/D LINE L1 5073 5320 -858 1639 159 7 49 chr17 48496418 48496726 -41007827 + AluJb SINE Alu 1 295 -17 2330 54 7 0 chr17 48496726 48497020 -41007533 + AluY SINE Alu 1 296 -15 813 177 29 140 chr17 48497020 48497099 -41007454 + L1MC/D LINE L1 5319 5313 -865 1778 164 7 3 chr17 48497099 48497398 -41007155 + AluJo SINE Alu 1 300 -12 813 177 29 140 chr17 48497398 48497557 -41006996 + L1MC/D LINE L1 5312 5487 -691 2117 90 7 7 chr17 48497561 48497861 -41006692 + AluSq SINE Alu 1 300 -13 275 243 60 113 chr17 48497862 48498146 -41006407 + L1M4 LINE L1 3761 4029 -2117 335 313 76 69 chr17 48498296 48498587 -41005966 + L1M4 LINE L1 4134 4426 -1720 1873 92 38 63 chr17 48498629 48498946 -41005607 + AluSx SINE Alu 2 310 -2 2240 86 7 10 chr17 48499083 48499385 -41005168 - AluSx SINE Alu -11 301 1 336 217 70 26 chr17 48499462 48499497 -41005056 - MIR3 SINE MIR -1 207 175 1126 165 82 5 chr17 48499497 48499703 -41004850 + MER58A DNA MER1_type 3 224 0 336 217 70 26 chr17 48499703 48499782 -41004771 - MIR3 SINE MIR -33 175 88 2060 108 0 7 chr17 48500038 48500363 -41004190 + AluSx SINE Alu 1 323 0 234 229 41 66 chr17 48500440 48500562 -41003991 + L1MC/D LINE L1 5607 5725 -2083 195 361 4 10 chr17 48500916 48501035 -41003518 + MIR SINE MIR 33 139 -69 1655 151 6 70 chr17 48501270 48501446 -41003107 - AluJb SINE Alu -2 310 163 2522 48 0 3 chr17 48501446 48501758 -41002795 - AluY SINE Alu 0 311 1 1655 151 6 70 chr17 48501758 48501912 -41002641 - AluJb SINE Alu -149 163 1 2068 122 0 25 chr17 48503169 48503489 -41001064 + AluSx SINE Alu 1 312 0 329 297 50 0 chr17 48503690 48503791 -41000762 + MER5A DNA MER1_type 35 140 -49 393 258 21 102 chr17 48503985 48504085 -41000468 - MIR SINE MIR -59 203 123 2211 94 3 3 chr17 48504085 48504384 -41000169 + AluSc SINE Alu 1 299 -10 393 258 21 102 chr17 48504384 48504469 -41000084 - MIR SINE MIR -139 123 33 181 318 0 30 chr17 48504486 48504552 -41000001 + MIR SINE MIR 28 91 -171 346 144 200 0 chr17 48504755 48504845 -40999708 + MIR SINE MIR 82 189 -73 2086 141 0 0 chr17 48504858 48505170 -40999383 + AluSx SINE Alu 1 312 0 1782 138 11 0 chr17 48505386 48505669 -40998884 + AluJb SINE Alu 14 299 -13 647 247 192 0 chr17 48505995 48506214 -40998339 - MIR SINE MIR 0 262 2 1755 218 133 20 chr17 48506368 48506687 -40997866 - L1MC4 LINE L1 -355 7687 7405 1517 173 42 65 chr17 48506687 48506993 -40997560 + AluJo SINE Alu 2 300 -2 1755 218 133 20 chr17 48506993 48507320 -40997233 - L1MC4 LINE L1 -637 7405 6968 180 274 0 0 chr17 48508751 48508802 -40995751 - MIR SINE MIR -110 152 102 1840 105 0 41 chr17 48509754 48510048 -40994505 - AluSq SINE Alu -25 288 7 1200 89 0 0 chr17 48510298 48510456 -40994097 - AluSg/x SINE Alu -15 295 138 268 309 15 0 chr17 48510460 48510528 -40994025 + L2 LINE L2 3245 3313 0 24 0 0 0 chr17 48510712 48510736 -40993817 + AT_rich Low_complexity Low_complexity 1 24 0 632 197 16 0 chr17 48510775 48510902 -40993651 - MIR SINE MIR -85 177 49 21 0 0 0 chr17 48510944 48510965 -40993588 + AT_rich Low_complexity Low_complexity 1 21 0 289 139 47 23 chr17 48510974 48511060 -40993493 + CT-rich Low_complexity Low_complexity 2 89 0 195 114 0 0 chr17 48511059 48511094 -40993459 + (TCCCC)n Simple_repeat Simple_repeat 2 36 0 * 1614 165 33 4 chr17 48511094 48511367 -40993186 - AluSx SINE Alu -31 281 1 946 142 0 0 chr17 48511453 48511594 -40992959 + AluSg/x SINE Alu 131 271 -39 1875 152 0 13 chr17 48511681 48511983 -40992570 - 7SLRNA srpRNA srpRNA -10 310 13 6586 201 34 60 chr17 48512018 48512054 -40992499 + L1M4 LINE L1 2 37 -6609 2379 70 3 6 chr17 48512054 48512366 -40992187 + AluY SINE Alu 1 311 0 6586 201 34 60 chr17 48512366 48513535 -40991018 + L1M4 LINE L1 37 1147 -5499 731 168 8 8 chr17 48513535 48513666 -40990887 - FLAM_C SINE Alu -2 131 1 6586 201 34 60 chr17 48513666 48514320 -40990233 + L1M4 LINE L1 1147 1817 -4829 994 235 5 5 chr17 48514322 48514543 -40990010 + AluJb SINE Alu 2 222 -90 386 239 55 26 chr17 48514816 48514968 -40989585 - AluJo SINE Alu -129 173 41 341 303 121 12 chr17 48515635 48515800 -40988753 + MER5A DNA MER1_type 7 189 0 2058 109 10 0 chr17 48516823 48517116 -40987437 - AluSx SINE Alu -16 296 1 350 252 39 10 chr17 48517116 48517219 -40987334 - MIR SINE MIR -16 246 141 737 247 65 47 chr17 48517225 48517610 -40986943 - L1MDa LINE L1 -4312 2228 1837 276 307 13 0 chr17 48517828 48517903 -40986650 - L2 LINE L2 -1018 2296 2221 2317 98 0 0 chr17 48517906 48518191 -40986362 + AluSc SINE Alu 1 285 -24 360 291 27 0 chr17 48518368 48518516 -40986037 + (TA)n Simple_repeat Simple_repeat 2 153 0 198 103 0 0 chr17 48518516 48518545 -40986008 + (CA)n Simple_repeat Simple_repeat 2 30 0 509 218 112 37 chr17 48518545 48518939 -40985614 + L1M4 LINE L1 2327 2798 -3964 803 169 0 0 chr17 48518940 48519058 -40985495 + FLAM_C SINE Alu 1 118 -25 1869 238 39 33 chr17 48519182 48519200 -40985353 + L1M4 LINE L1 2832 2848 -3796 2083 149 0 0 chr17 48519200 48519496 -40985057 - AluSx SINE Alu -16 296 1 2109 136 3 0 chr17 48519504 48519805 -40984748 - AluSx SINE Alu -10 302 1 1869 238 39 33 chr17 48519805 48520416 -40984137 + L1M4 LINE L1 2854 3474 -3170 2233 129 0 0 chr17 48520439 48520741 -40983812 + AluSx SINE Alu 1 302 -10 719 183 8 23 chr17 48520750 48520881 -40983672 + FLAM_C SINE Alu 5 133 0 1592 137 42 89 chr17 48520887 48521268 -40983285 + L1MA4 LINE L1 5769 6131 -169 2167 118 3 0 chr17 48521697 48522002 -40982551 - AluSx SINE Alu -6 306 1 330 235 201 39 chr17 48522009 48522188 -40982365 - HAL1 LINE L1 -210 2297 2090 2252 109 10 0 chr17 48522188 48522492 -40982061 + AluSx SINE Alu 1 307 -5 268 250 58 0 chr17 48522685 48522789 -40981764 - HAL1 LINE L1 -698 1809 1700 2140 141 0 0 chr17 48522870 48523169 -40981384 + AluJb SINE Alu 1 299 -13 180 0 0 0 chr17 48523195 48523215 -40981338 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 1286 159 81 63 chr17 48523358 48523629 -40980924 + AluJb SINE Alu 5 280 -32 189 0 0 0 chr17 48523632 48523653 -40980900 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 670 214 7 21 chr17 48523669 48523814 -40980739 + FLAM_C SINE Alu 1 143 0 716 176 8 8 chr17 48523949 48524074 -40980479 - AluJb SINE Alu -99 213 89 467 206 71 35 chr17 48524460 48524601 -40979952 + MER3 DNA MER1_type 7 152 -57 297 171 122 37 chr17 48524586 48524668 -40979885 - AluJo/FRAM SINE Alu -6 296 208 * 1713 167 3 55 chr17 48524669 48524856 -40979697 - AluJo SINE Alu -16 296 130 2210 120 7 0 chr17 48524856 48525156 -40979397 + AluSx SINE Alu 3 304 -8 1713 167 3 55 chr17 48525156 48525280 -40979273 - AluJo SINE Alu -182 130 1 311 182 0 0 chr17 48525282 48525337 -40979216 + MER3 DNA MER1_type 155 209 0 293 228 89 49 chr17 48525364 48525487 -40979066 - L1MC4a LINE L1 -1893 5915 5788 1681 185 7 17 chr17 48525949 48526247 -40978306 + AluJo SINE Alu 1 295 -17 325 310 8 8 chr17 48526865 48526994 -40977559 + MLT1H LTR MaLR 95 223 -326 234 225 101 34 chr17 48527285 48527374 -40977179 - MLT1J LTR MaLR -40 471 377 713 163 23 0 chr17 48527837 48527966 -40976587 + AluJo SINE Alu 2 133 -169 1948 140 33 0 chr17 48528122 48528422 -40976131 + AluSx SINE Alu 1 310 -2 2338 118 0 0 chr17 48528439 48528752 -40975801 + AluSq SINE Alu 1 313 0 396 154 0 39 chr17 48529596 48529674 -40974879 + MER21B LTR ERV1 12 86 -777 2172 110 63 0 chr17 48529737 48530072 -40974481 - L1PA14 LINE L1 -3 6158 5803 1568 230 68 14 chr17 48530084 48530684 -40973869 + MER21B LTR ERV1 19 682 -181 996 152 18 12 chr17 48531480 48531651 -40972902 + AluJo SINE Alu 121 292 -20 2017 138 3 7 chr17 48531805 48532102 -40972451 - AluSx SINE Alu -16 296 1 194 292 14 56 chr17 48532173 48532245 -40972308 + L2 LINE L2 3184 3252 -20 270 329 67 75 chr17 48532334 48532480 -40972073 + MIR SINE MIR 2 147 -115 2168 72 15 4 chr17 48532480 48532745 -40971808 - AluY SINE Alu -9 302 35 270 329 67 75 chr17 48532745 48532853 -40971700 + MIR SINE MIR 147 254 -8 1952 152 10 3 chr17 48535660 48535957 -40968596 + AluJb SINE Alu 1 299 -13 186 71 0 0 chr17 48536017 48536045 -40968508 + (T)n Simple_repeat Simple_repeat 1 28 0 237 342 83 35 chr17 48539306 48539534 -40965019 + L2 LINE L2 2826 3064 -208 790 168 0 0 chr17 48539591 48539710 -40964843 + AluJb SINE Alu 172 290 -22 486 287 55 70 chr17 48539718 48540192 -40964361 - L1M4 LINE L1 -1529 4617 4151 1003 178 103 23 chr17 48540203 48540417 -40964136 - AluJo SINE Alu 0 312 82 1085 192 0 19 chr17 48540728 48540962 -40963591 + AluJo SINE Alu 1 268 -44 594 173 22 43 chr17 48541016 48541155 -40963398 - MER2 DNA MER2_type -209 136 1 1260 81 6 0 chr17 48541389 48541549 -40963004 - AluSp SINE Alu -9 304 144 242 241 184 11 chr17 48541569 48541656 -40962897 - MIR3 SINE MIR -14 194 93 1825 122 69 3 chr17 48542089 48542377 -40962176 + AluSx SINE Alu 1 307 -5 225 277 133 12 chr17 48542388 48542471 -40962082 - MIR3 SINE MIR -33 175 83 465 196 31 10 chr17 48542738 48542835 -40961718 + MER91A DNA MER1_type 6 104 -92 296 283 62 29 chr17 48543699 48543806 -40960747 + L1ME4a LINE L1 5852 5954 -167 2062 125 21 7 chr17 48543806 48544093 -40960460 - AluSx SINE Alu -21 291 1 296 283 62 29 chr17 48544093 48544225 -40960328 + L1ME4a LINE L1 5954 6099 -22 254 259 77 56 chr17 48544264 48544350 -40960203 + L1ME4a LINE L1 5955 6047 -74 2040 128 10 0 chr17 48544350 48544664 -40959889 - AluSx SINE Alu 0 312 2 254 259 77 56 chr17 48544664 48544720 -40959833 + L1ME4a LINE L1 6047 6100 -21 2379 79 0 55 chr17 48544888 48545216 -40959337 + AluSg SINE Alu 1 310 0 586 348 117 53 chr17 48545439 48545772 -40958781 + L3 LINE CR1 834 1217 -360 1973 124 57 10 chr17 48545772 48546070 -40958483 + AluSx SINE Alu 1 312 0 586 348 117 53 chr17 48546070 48546285 -40958268 + L3 LINE CR1 1217 1417 -160 274 242 50 30 chr17 48546291 48546390 -40958163 + MER5A DNA MER1_type 4 104 -85 2218 121 3 13 chr17 48546416 48546729 -40957824 + AluSq SINE Alu 1 310 -3 2128 132 0 0 chr17 48546779 48547066 -40957487 - AluSx SINE Alu -25 287 1 2030 101 87 0 chr17 48547180 48547456 -40957097 - AluSc SINE Alu -9 300 1 301 226 140 11 chr17 48548211 48548304 -40956249 - L1ME LINE L1 -326 5795 5691 308 272 107 0 chr17 48548393 48548496 -40956057 - MIR SINE MIR -147 115 2 1905 149 13 10 chr17 48548498 48548807 -40955746 - AluJo SINE Alu -2 310 1 570 231 56 19 chr17 48548811 48549027 -40955526 - L1ME LINE L1 -2331 5477 5254 382 334 111 50 chr17 48549045 48549063 -40955490 - L1ME LINE L1 -913 5233 5218 2413 95 0 3 chr17 48549063 48549367 -40955186 + AluSq SINE Alu 1 303 -10 382 334 111 50 chr17 48549367 48549707 -40954846 - L1ME LINE L1 -928 5218 4853 2285 116 0 0 chr17 48550172 48550474 -40954079 - AluY SINE Alu -9 302 1 2164 104 7 0 chr17 48550570 48550893 -40953660 + AluSg SINE Alu 1 325 0 2278 121 0 3 chr17 48551327 48551741 -40952812 - AluSx SINE Alu 0 413 1 2323 64 16 45 chr17 48552032 48552343 -40952210 - AluY SINE Alu -9 302 1 396 0 0 0 chr17 48552557 48552601 -40951952 + (CA)n Simple_repeat Simple_repeat 2 45 0 2374 82 3 7 chr17 48552779 48553084 -40951469 + AluSx SINE Alu 1 304 -8 1971 147 7 7 chr17 48553093 48553393 -40951160 + AluSx SINE Alu 1 300 -12 2266 115 3 3 chr17 48553571 48553883 -40950670 - AluSx SINE Alu 0 312 1 646 215 99 21 chr17 48553901 48554092 -40950461 - L2 LINE L2 -1 3312 3107 693 255 7 0 chr17 48554092 48554245 -40950308 + MLT1A1 LTR MaLR 171 324 -41 583 292 99 16 chr17 48554247 48554490 -40950063 - L2 LINE L2 -189 3124 2862 1033 192 0 0 chr17 48554490 48554667 -40949886 + AluSg/x SINE Alu 131 307 -5 276 248 62 47 chr17 48554767 48554831 -40949722 - L1ME3A LINE L1 -5 6165 6103 2053 141 3 3 chr17 48554831 48555128 -40949425 - AluJb SINE Alu -15 297 1 276 248 62 47 chr17 48555128 48555192 -40949361 - L1ME3A LINE L1 -67 6103 6035 1803 111 0 0 chr17 48555196 48555431 -40949122 + AluSx SINE Alu 2 236 -76 249 33 0 0 chr17 48555432 48555462 -40949091 + (A)n Simple_repeat Simple_repeat 1 30 0 2294 105 7 0 chr17 48555478 48555784 -40948769 + AluSq SINE Alu 1 308 -5 1130 251 81 6 chr17 48555855 48556172 -40948381 - L1ME3A LINE L1 -215 5955 5607 2113 134 0 26 chr17 48556172 48556479 -40948074 - AluSx SINE Alu -13 299 1 1130 251 81 6 chr17 48556479 48556519 -40948034 - L1ME3A LINE L1 -563 5607 5571 345 312 0 0 chr17 48556520 48556613 -40947940 - L2 LINE L2 -531 2783 2691 2202 258 30 53 chr17 48556698 48557081 -40947472 + L2 LINE L2 2227 2617 -696 2159 119 33 0 chr17 48557081 48557383 -40947170 - AluSx SINE Alu 0 312 1 2202 258 30 53 chr17 48557383 48558103 -40946450 + L2 LINE L2 2617 3313 0 2272 124 0 0 chr17 48558939 48559238 -40945315 - AluSx SINE Alu -11 301 3 2204 95 61 7 chr17 48559246 48559542 -40945011 - AluSx SINE Alu 0 312 1 486 277 9 0 chr17 48560545 48560657 -40943896 + MER81 DNA DNA 2 114 0 190 203 27 40 chr17 48560908 48560982 -40943571 - L3 LINE CR1 -362 1215 1143 2101 124 0 0 chr17 48561459 48561732 -40942821 + AluSx SINE Alu 19 291 -21 2199 107 4 0 chr17 48561737 48562044 -40942509 + AluSq SINE Alu 1 308 0 2203 103 17 3 chr17 48562070 48562362 -40942191 + AluSq SINE Alu 3 298 -15 926 171 116 0 chr17 48562420 48562636 -40941917 + L1MC3 LINE L1 7017 7257 -528 452 279 118 7 chr17 48562705 48562841 -40941712 + MIR3 SINE MIR 4 154 -54 1994 168 0 13 chr17 48562853 48563169 -40941384 + AluJb SINE Alu 1 312 0 2197 108 0 45 chr17 48563366 48563680 -40940873 + AluSx SINE Alu 1 300 -12 2472 77 0 13 chr17 48564613 48564923 -40939630 + AluSx SINE Alu 1 306 -6 512 234 18 24 chr17 48565202 48565351 -40939202 - MIR SINE MIR -60 148 1 1643 82 8 78 chr17 48565486 48565742 -40938811 + AluSp SINE Alu 62 299 -14 251 317 42 14 chr17 48566155 48566297 -40938256 + ERVL LTR ERVL 780 925 -4071 1938 110 3 57 chr17 48566333 48566671 -40937882 + AluSx SINE Alu 1 322 0 330 300 47 29 chr17 48566789 48566959 -40937594 + ERVL LTR ERVL 4601 4773 -991 1128 86 0 0 chr17 48566974 48567114 -40937439 + AluSg1 SINE Alu 2 141 -168 11039 51 15 11 chr17 48567131 48568511 -40936042 + SVA Other Other 1 1386 0 1214 131 0 0 chr17 48568526 48568709 -40935844 + AluSg1 SINE Alu 130 312 0 260 196 0 0 chr17 48568970 48569021 -40935532 + LTR67 LTR ERVL 5 55 -502 1063 140 0 11 chr17 48569073 48569251 -40935302 + AluSg1 SINE Alu 135 310 0 267 309 18 9 chr17 48569406 48569516 -40935037 + LTR67 LTR ERVL 443 553 -4 289 224 0 0 chr17 48569581 48569648 -40934905 + L1ME2 LINE L1 3877 3943 -2203 936 108 0 0 chr17 48569662 48569792 -40934761 + AluSg SINE Alu 1 130 -180 2214 92 0 0 chr17 48569796 48570089 -40934464 + AluSg SINE Alu 1 293 -17 261 321 69 8 chr17 48570130 48570261 -40934292 + L1ME2 LINE L1 3982 4120 -2026 2159 110 7 0 chr17 48570269 48570577 -40933976 + AluSx SINE Alu 1 310 -2 243 133 0 0 chr17 48570580 48570625 -40933928 + L1ME2 LINE L1 4381 4425 -1721 1757 126 3 52 chr17 48570627 48570937 -40933616 + AluJb SINE Alu 1 295 -17 1038 302 123 19 chr17 48570937 48571936 -40932617 + L1ME2 LINE L1 4768 5866 -298 896 142 14 0 chr17 48571956 48572104 -40932449 - AluSg/x SINE Alu -3 307 158 2220 103 3 0 chr17 48572145 48572457 -40932096 - AluSp SINE Alu 0 313 1 204 40 0 0 chr17 48572463 48572488 -40932065 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 3259 151 14 24 chr17 48572515 48573106 -40931447 + L1MB7 LINE L1 5581 6165 -19 1750 129 14 51 chr17 48573428 48573744 -40930809 - AluSx SINE Alu 0 305 1 759 215 65 32 chr17 48573915 48574101 -40930452 + AluJb SINE Alu 121 312 0 246 105 0 0 chr17 48574101 48574139 -40930414 + (GA)n Simple_repeat Simple_repeat 1 38 0 192 77 0 0 chr17 48574133 48574159 -40930394 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 * 2199 109 0 0 chr17 48574170 48574483 -40930070 + AluSq SINE Alu 1 313 0 903 199 0 6 chr17 48574483 48574659 -40929894 + AluJb SINE Alu 134 308 -4 822 160 0 0 chr17 48574870 48574995 -40929558 + FLAM_C SINE Alu 1 125 -8 191 61 30 0 chr17 48574995 48575028 -40929525 + (TA)n Simple_repeat Simple_repeat 2 35 0 797 163 0 22 chr17 48575113 48575248 -40929305 + FLAM_C SINE Alu 2 133 0 1086 169 0 0 chr17 48575889 48576067 -40928486 + L1MD2 LINE L1 5547 5724 -635 310 131 16 98 chr17 48576068 48576129 -40928424 - MLT2B1 LTR ERVL 0 515 459 214 250 31 16 chr17 48576132 48576260 -40928293 + (TA)n Simple_repeat Simple_repeat 2 131 0 494 104 80 0 chr17 48576263 48576426 -40928127 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 1631 140 52 21 chr17 48576431 48576580 -40927973 + AluJb SINE Alu 1 144 -168 1912 143 3 3 chr17 48576580 48576881 -40927672 + AluJb SINE Alu 1 301 -11 1631 140 52 21 chr17 48576881 48577017 -40927536 + AluJb SINE Alu 144 295 -17 1688 203 99 42 chr17 48577083 48577537 -40927016 - MLT2B1 LTR ERVL -40 480 1 1486 201 58 58 chr17 48577537 48577738 -40926815 + L1MD2 LINE L1 5721 5921 -438 2262 83 3 3 chr17 48577738 48578038 -40926515 - AluSc SINE Alu -9 300 1 2174 120 0 0 chr17 48578042 48578350 -40926203 - AluSx SINE Alu -4 308 1 1486 201 58 58 chr17 48578350 48578457 -40926096 + L1MD2 LINE L1 5924 6037 -322 1612 187 3 22 chr17 48578457 48578772 -40925781 - AluJb SINE Alu -3 309 1 1486 201 58 58 chr17 48578772 48578869 -40925684 + L1MD2 LINE L1 6036 6132 -227 585 226 52 0 chr17 48578872 48578987 -40925566 + FRAM SINE Alu 2 122 -54 498 310 95 15 chr17 48579056 48579101 -40925452 - MIR SINE MIR -27 235 195 1723 157 34 0 chr17 48579101 48579395 -40925158 + AluJb SINE Alu 1 304 -8 498 310 95 15 chr17 48579395 48579549 -40925004 - MIR SINE MIR -67 195 20 1878 144 24 0 chr17 48579837 48580129 -40924424 + AluSx SINE Alu 1 299 -13 239 239 11 114 chr17 48580273 48580361 -40924192 + L2 LINE L2 3194 3272 0 801 259 43 63 chr17 48580380 48580728 -40923825 - MER102b DNA MER1_type 0 341 1 631 226 29 0 chr17 48581397 48581638 -40922915 + L1MD3 LINE L1 7493 7827 -168 1916 118 0 44 chr17 48581653 48582009 -40922544 + AluSx SINE Alu 1 343 0 1761 196 0 0 chr17 48582014 48582326 -40922227 + AluSx SINE Alu 1 312 0 308 91 0 0 chr17 48582326 48582370 -40922183 + L1MB2 LINE L1 6118 6161 -10 2035 129 3 0 chr17 48582371 48582665 -40921888 - AluSx SINE Alu -17 295 1 1401 204 75 82 chr17 48582682 48583033 -40921520 + L1MC4 LINE L1 6640 6989 -1053 2219 108 0 0 chr17 48583033 48583329 -40921224 - AluSx SINE Alu -14 298 3 1401 204 75 82 chr17 48583329 48583418 -40921135 + L1MC4 LINE L1 6989 7077 -965 394 245 41 0 chr17 48584185 48584283 -40920270 + MIR SINE MIR 77 178 -84 1083 105 0 0 chr17 48584408 48584551 -40920002 + AluSg/x SINE Alu 156 298 -14 1408 148 95 27 chr17 48584585 48584874 -40919679 + AluJo SINE Alu 4 310 0 2064 116 3 0 chr17 48584874 48585168 -40919385 + AluSx SINE Alu 1 295 -17 2155 75 0 0 chr17 48585414 48585693 -40918860 + AluSg SINE Alu 1 279 -31 396 0 0 0 chr17 48585696 48585740 -40918813 + (CAA)n Simple_repeat Simple_repeat 2 45 0 549 241 16 105 chr17 48585832 48585889 -40918664 + MIR SINE MIR 88 148 -114 2151 89 3 3 chr17 48585889 48586182 -40918371 - AluSq SINE Alu -20 293 1 549 241 16 105 chr17 48586182 48586315 -40918238 + MIR SINE MIR 148 261 -1 2037 151 0 0 chr17 48586454 48586766 -40917787 - AluSx SINE Alu 0 312 1 187 53 26 53 chr17 48587283 48587321 -40917232 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 1901 146 3 19 chr17 48587371 48587686 -40916867 + AluJo SINE Alu 1 310 -2 293 109 18 0 chr17 48587917 48587972 -40916581 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 754 271 21 0 chr17 48588049 48588237 -40916316 - MIR SINE MIR -69 193 2 2185 96 7 0 chr17 48588512 48588815 -40915738 - AluSp SINE Alu -8 305 1 2064 127 7 0 chr17 48589030 48589329 -40915224 - AluJb SINE Alu -11 301 1 388 200 0 95 chr17 48589329 48589397 -40915156 + L1ME3 LINE L1 6039 6095 -67 1684 163 28 0 chr17 48589397 48589680 -40914873 + AluSx SINE Alu 1 291 -21 388 200 0 95 chr17 48589680 48589716 -40914837 + L1ME3 LINE L1 6095 6133 -29 2026 116 3 0 chr17 48589746 48590038 -40914515 + AluSx SINE Alu 1 293 -19 1987 119 17 7 chr17 48590323 48590618 -40913935 + AluSx SINE Alu 1 298 -14 438 169 0 0 chr17 48590631 48590696 -40913857 + AluJ/FLAM SINE Alu 5 69 -243 1156 159 13 48 chr17 48591274 48591436 -40913117 - MER20 DNA MER1_type 0 219 66 2279 91 0 0 chr17 48591436 48591733 -40912820 + AluSq SINE Alu 1 297 -16 1156 159 13 48 chr17 48591733 48591797 -40912756 - MER20 DNA MER1_type -153 66 1 2055 115 7 0 chr17 48591820 48592115 -40912438 + AluSq SINE Alu 1 297 -16 200 229 0 16 chr17 48592951 48593012 -40911541 + (TA)n Simple_repeat Simple_repeat 2 61 0 2056 111 16 3 chr17 48593947 48594253 -40910300 + AluSg SINE Alu 1 310 0 2304 109 0 0 chr17 48594286 48594598 -40909955 + AluSx SINE Alu 1 312 0 300 239 69 62 chr17 48594818 48594948 -40909605 + L1ME4a LINE L1 5989 6119 -2 814 182 20 3 chr17 48594967 48595264 -40909289 + GA-rich Low_complexity Low_complexity 1 302 0 2217 110 3 0 chr17 48595417 48595726 -40908827 + AluSp SINE Alu 1 310 -3 756 165 0 8 chr17 48596551 48596672 -40907881 + FLAM_C SINE Alu 1 120 -23 224 209 0 75 chr17 48596819 48596886 -40907667 - MIR SINE MIR -194 68 7 627 111 0 10 chr17 48597904 48598003 -40906550 - AluSg/x SINE Alu 0 310 213 1137 103 0 7 chr17 48598007 48598162 -40906391 - AluSq SINE Alu -159 154 1 2128 110 3 0 chr17 48598731 48599031 -40905522 + AluSx SINE Alu 1 301 -11 1243 89 0 22 chr17 48599031 48599211 -40905342 + AluSq SINE Alu 134 309 -4 1646 95 27 46 chr17 48599931 48600194 -40904359 - AluSx SINE Alu -27 285 28 1584 75 0 0 chr17 48600194 48600394 -40904159 + AluSg/x SINE Alu 88 287 -22 236 200 57 43 chr17 48600636 48600706 -40903847 + MLT1L LTR MaLR 219 289 -326 26 30 0 0 chr17 48601159 48601192 -40903361 + AT_rich Low_complexity Low_complexity 1 33 0 186 194 75 90 chr17 48601499 48601566 -40902987 + MER5B DNA MER1_type 5 70 -108 21 36 0 0 chr17 48602749 48602777 -40901776 + AT_rich Low_complexity Low_complexity 1 28 0 261 337 68 49 chr17 48603333 48603382 -40901171 + MER5B DNA MER1_type 1 48 -130 2440 71 0 0 chr17 48603382 48603693 -40900860 - AluY SINE Alu 0 311 1 261 337 68 49 chr17 48603693 48603806 -40900747 + MER5B DNA MER1_type 48 166 -12 258 196 189 40 chr17 48603895 48604043 -40900510 + L1MC5 LINE L1 7674 7843 -118 2181 74 13 10 chr17 48604088 48604386 -40900167 - AluSq SINE Alu -14 299 1 2162 91 3 17 chr17 48604546 48604842 -40899711 - AluSq SINE Alu -21 292 1 2019 78 7 14 chr17 48605942 48606225 -40898328 - AluSx SINE Alu -20 292 12 843 139 17 87 chr17 48606394 48606567 -40897986 + AluJo SINE Alu 1 161 -151 1952 92 7 0 chr17 48606775 48607048 -40897505 + AluSq SINE Alu 1 275 -38 1975 122 3 7 chr17 48607444 48607738 -40896815 + AluSx SINE Alu 1 293 -19 1981 98 3 34 chr17 48607866 48608163 -40896390 - AluSq SINE Alu -25 288 1 1781 168 3 0 chr17 48608173 48608465 -40896088 - AluJo SINE Alu -18 294 2 688 167 0 0 chr17 48608475 48608589 -40895964 - AluSp/q SINE Alu -6 307 194 2000 139 0 0 chr17 48608795 48609097 -40895456 + AluSg SINE Alu 1 302 -8 257 182 78 26 chr17 48609979 48610039 -40894514 - Charlie5 DNA MER1_type 0 2624 2557 1977 128 0 0 chr17 48610039 48610340 -40894213 - AluSx SINE Alu 0 301 1 257 182 78 26 chr17 48610340 48610355 -40894198 - Charlie5 DNA MER1_type -67 2557 2544 301 343 82 24 chr17 48610368 48610429 -40894124 - L1MCa LINE L1 -2199 4227 4171 1946 137 10 10 chr17 48610429 48610735 -40893818 - AluSx SINE Alu -6 306 1 301 343 82 24 chr17 48610735 48610880 -40893673 - L1MCa LINE L1 -2255 4171 4009 30 0 0 0 chr17 48610899 48610929 -40893624 + AT_rich Low_complexity Low_complexity 1 30 0 241 129 14 114 chr17 48611265 48611335 -40893218 - L1M1 LINE L1 -7492 73 11 536 271 197 15 chr17 48611443 48611834 -40892719 - L1MCa LINE L1 -2833 3593 3132 419 213 210 17 chr17 48611982 48612130 -40892423 - L1PB4 LINE L1 0 6166 5996 229 310 83 44 chr17 48612154 48612383 -40892170 - L1ME LINE L1 -307 5863 5626 1359 176 4 4 chr17 48612465 48612709 -40891844 + AluJo SINE Alu 17 260 -52 1241 121 0 0 chr17 48612719 48612901 -40891652 + AluSg/x SINE Alu 127 308 -2 208 275 43 14 chr17 48614066 48614135 -40890418 - MIR SINE MIR -6 256 186 592 234 82 70 chr17 48614340 48614426 -40890127 - MER112 DNA MER1_type -12 248 165 1983 120 0 10 chr17 48614426 48614717 -40889836 + AluSc SINE Alu 1 288 -21 592 234 82 70 chr17 48614717 48614874 -40889679 - MER112 DNA MER1_type -95 165 2 284 64 21 0 chr17 48615426 48615473 -40889080 + (TA)n Simple_repeat Simple_repeat 1 48 0 306 187 13 80 chr17 48615478 48615553 -40889000 - L1MCa LINE L1 -4362 2064 1995 936 139 7 0 chr17 48615568 48615719 -40888834 + AluSq SINE Alu 130 281 -32 186 71 0 0 chr17 48615721 48615749 -40888804 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1226 205 77 63 chr17 48615898 48616342 -40888211 - LTR7 LTR ERV1 0 450 1 374 285 80 31 chr17 48616893 48617180 -40887373 + L1MC5 LINE L1 7505 7877 -165 233 0 62 0 chr17 48617192 48617224 -40887329 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 2173 100 0 0 chr17 48617355 48617646 -40886907 + AluSx SINE Alu 7 297 -15 1909 140 31 0 chr17 48617654 48617940 -40886613 + AluSx SINE Alu 1 295 -17 825 163 0 16 chr17 48617995 48618124 -40886429 - FLAM_C SINE Alu -16 127 2 29 0 0 0 chr17 48618139 48618168 -40886385 + AT_rich Low_complexity Low_complexity 1 29 0 982 150 0 0 chr17 48618216 48618363 -40886190 + AluJb SINE Alu 156 302 -10 365 283 14 141 chr17 48619218 48619494 -40885059 + L1MC4a LINE L1 4864 5104 -1042 305 226 0 108 chr17 48619447 48619549 -40885004 - L1MC4 LINE L1 -1340 6702 6612 * 249 233 55 0 chr17 48619561 48619634 -40884919 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 898 291 58 59 chr17 48619634 48620554 -40883999 + L1MC4a LINE L1 5084 5396 -750 1939 151 0 10 chr17 48620994 48621293 -40883260 + AluJb SINE Alu 1 296 -16 2170 131 0 0 chr17 48621672 48621978 -40882575 + AluSx SINE Alu 1 306 -6 1216 134 0 51 chr17 48622004 48622220 -40882333 + AluJb SINE Alu 91 295 -17 795 288 44 105 chr17 48622262 48622716 -40881837 + L1M4 LINE L1 2263 2647 -3499 2004 129 0 0 chr17 48622716 48623003 -40881550 + AluSx SINE Alu 26 312 0 795 288 44 105 chr17 48623003 48623274 -40881279 + L1M4 LINE L1 2647 2933 -3213 186 43 0 0 chr17 48623390 48623413 -40881140 + (CATAT)n Simple_repeat Simple_repeat 4 26 0 321 309 115 0 chr17 48623416 48623581 -40880972 + L2 LINE L2 3125 3308 -5 1422 80 75 24 chr17 48624409 48624622 -40879931 + L1PB1 LINE L1 5928 6151 0 289 290 68 31 chr17 48625912 48626074 -40878479 + MIR SINE MIR 28 195 -67 * 325 312 149 0 chr17 48626063 48626204 -40878349 + L2 LINE L2 3108 3269 -3 336 266 48 7 chr17 48627435 48627559 -40876994 - MIR SINE MIR -63 145 33 293 262 29 29 chr17 48628619 48628722 -40875831 - MIR3 SINE MIR -39 169 67 207 0 0 0 chr17 48628951 48628974 -40875579 + (A)n Simple_repeat Simple_repeat 1 23 0 1157 239 85 22 chr17 48629068 48629386 -40875167 - MER46C DNA MER2_type 0 338 1 284 208 293 35 chr17 48630275 48630416 -40874137 + MIR3 SINE MIR 20 196 -12 21 0 0 0 chr17 48630890 48630911 -40873642 + GC_rich Low_complexity Low_complexity 1 21 0 256 259 0 25 chr17 48632473 48632554 -40871999 + C-rich Low_complexity Low_complexity 4 82 0 396 291 140 28 chr17 48633673 48633852 -40870701 + MIR SINE MIR 34 232 -30 2116 113 7 0 chr17 48633866 48634166 -40870387 - AluSx SINE Alu -7 305 4 998 71 16 0 chr17 48634268 48634394 -40870159 + AluSg/x SINE Alu 162 289 -23 380 316 63 16 chr17 48636580 48636770 -40867783 + MER112 DNA MER1_type 13 211 -49 1914 107 52 0 chr17 48636790 48637084 -40867469 - AluSx SINE Alu 0 308 1 321 237 48 53 chr17 48638596 48638722 -40865831 + MIR SINE MIR 40 165 -43 917 243 45 9 chr17 48638791 48639013 -40865540 - MIR SINE MIR -19 243 14 190 341 154 0 chr17 48639057 48639148 -40865405 - L2 LINE L2 -34 3238 3134 2156 120 3 0 chr17 48640413 48640722 -40863831 - AluSx SINE Alu -2 310 1 270 317 106 8 chr17 48640726 48640849 -40863704 + L2 LINE L2 2687 2821 -493 261 209 30 45 chr17 48641197 48641264 -40863289 + L2 LINE L2 3014 3079 -193 266 283 55 29 chr17 48641316 48641438 -40863115 - MIR SINE MIR -63 145 73 329 275 126 18 chr17 48642606 48642828 -40861725 + L2 LINE L2 2811 3056 -216 248 452 29 0 chr17 48642946 48643156 -40861397 + L2 LINE L2 3057 3272 0 330 300 0 0 chr17 48643276 48643456 -40861097 + (TG)n Simple_repeat Simple_repeat 1 180 0 573 268 8 0 chr17 48643789 48643916 -40860637 - MIR SINE MIR -62 146 19 446 293 42 24 chr17 48644282 48644449 -40860104 - MIR SINE MIR -2 260 91 421 255 110 24 chr17 48644625 48644792 -40859761 - L1 LINE L1 -1697 4449 4280 495 287 43 12 chr17 48644799 48644963 -40859590 + MIR SINE MIR 6 174 -88 254 318 9 47 chr17 48645040 48645147 -40859406 + MIR SINE MIR 159 261 -1 2256 97 7 3 chr17 48645797 48646106 -40858447 - AluSp SINE Alu -3 310 1 389 278 118 14 chr17 48646651 48646795 -40857758 - MIR SINE MIR -39 223 65 322 303 102 20 chr17 48646807 48647101 -40857452 + L1ME4a LINE L1 5793 6110 -11 557 249 6 0 chr17 48647255 48647432 -40857121 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 621 272 2 0 chr17 48647481 48648004 -40856549 + (CCTA)n Simple_repeat Simple_repeat 1 524 0 398 227 17 25 chr17 48648010 48648129 -40856424 + (TCTA)n Simple_repeat Simple_repeat 2 119 0 580 284 62 6 chr17 48648721 48648897 -40855656 - MIR SINE MIR -75 187 2 281 388 39 0 chr17 48649293 48649422 -40855131 + MIR SINE MIR 63 196 -66 790 173 23 8 chr17 48650095 48650216 -40854337 + AluJb SINE Alu 1 126 -186 207 0 0 0 chr17 48650216 48650239 -40854314 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 790 173 23 8 chr17 48650239 48650250 -40854303 + AluJb SINE Alu 126 135 -177 693 195 5 87 chr17 48650250 48650435 -40854118 + MIR SINE MIR 61 230 -32 687 249 69 5 chr17 48650538 48650727 -40853826 - MER3 DNA MER1_type -8 201 1 2631 277 202 14 chr17 48652237 48652642 -40851911 + L2 LINE L2 1360 1687 -1626 2088 101 10 13 chr17 48652642 48652940 -40851613 + AluSx SINE Alu 1 297 -15 2631 277 202 14 chr17 48652940 48654177 -40850376 + L2 LINE L2 1687 3311 -2 1724 179 37 0 chr17 48654695 48654992 -40849561 + AluSx SINE Alu 1 308 -4 1430 142 0 13 chr17 48655025 48655076 -40849477 + AluSg/x SINE Alu 85 135 -177 2183 113 3 0 chr17 48655076 48655385 -40849168 + AluSp SINE Alu 1 310 -3 1430 142 0 13 chr17 48655385 48655559 -40848994 + AluSg/x SINE Alu 135 307 -5 2244 100 0 13 chr17 48656271 48656580 -40847973 - AluSx SINE Alu -7 305 1 3547 169 21 25 chr17 48656592 48656659 -40847894 - L1MB7 LINE L1 0 6184 6118 1829 143 16 36 chr17 48656659 48656967 -40847586 + AluJb SINE Alu 1 302 -10 3547 169 21 25 chr17 48656967 48657574 -40846979 - L1MB7 LINE L1 -66 6118 5513 1671 201 26 21 chr17 48657605 48657661 -40846892 - L1MB7 LINE L1 -803 5343 5289 1592 160 93 146 chr17 48657661 48658075 -40846478 + MLT1C LTR MaLR 1 435 -32 2029 134 17 0 chr17 48658075 48658367 -40846186 - AluSx SINE Alu -15 297 1 1822 153 7 7 chr17 48658369 48658664 -40845889 - AluJb SINE Alu -16 296 2 2323 84 0 10 chr17 48658672 48658982 -40845571 - AluY SINE Alu -4 307 1 1592 160 93 146 chr17 48658982 48659048 -40845505 + MLT1C LTR MaLR 443 467 0 1671 201 26 21 chr17 48659048 48659418 -40845135 - L1MB7 LINE L1 -857 5289 4915 1917 145 0 14 chr17 48660602 48660899 -40843654 + AluSx SINE Alu 5 297 -15 2136 138 0 0 chr17 48661177 48661488 -40843065 - AluSx SINE Alu -1 311 1 311 264 88 11 chr17 48662052 48662143 -40842410 + L2 LINE L2 3174 3271 -1 268 228 0 0 chr17 48662605 48662662 -40841891 - AluS SINE Alu -251 57 1 624 257 58 58 chr17 48662901 48663162 -40841391 - L2 LINE L2 -9 3304 3044 1988 140 0 3 chr17 48663222 48663514 -40841039 + AluSx SINE Alu 1 291 -21 2039 243 48 14 chr17 48663955 48664865 -40839688 + L1ME3 LINE L1 4895 5830 -332 1075 143 6 0 chr17 48664881 48665042 -40839511 - AluJo SINE Alu -150 162 1 737 189 86 0 chr17 48665042 48665228 -40839325 - MER33 DNA MER1_type -248 76 1 26 0 0 27 chr17 48665273 48665292 -40839261 + AT_rich Low_complexity Low_complexity 1 20 -16 1779 139 54 7 chr17 48665292 48665587 -40838966 + AluSg SINE Alu 1 309 -1 26 0 0 27 chr17 48665587 48665604 -40838949 + AT_rich Low_complexity Low_complexity 20 36 0 305 202 0 90 chr17 48665608 48665697 -40838856 - MIR SINE MIR -70 138 58 2113 108 0 14 chr17 48667588 48667883 -40836670 + AluSg1 SINE Alu 1 291 -18 2351 198 21 3 chr17 48667885 48668169 -40836384 + L1M4 LINE L1 4850 5127 -1047 2055 108 4 0 chr17 48668169 48668446 -40836107 + AluSx SINE Alu 24 301 -11 2351 198 21 3 chr17 48668446 48668457 -40836096 + L1M4 LINE L1 5127 5136 -1038 2221 75 0 26 chr17 48668457 48668762 -40835791 - AluY SINE Alu -14 297 1 2351 198 21 3 chr17 48668762 48669267 -40835286 + L1M4 LINE L1 5136 5670 -504 2070 93 28 0 chr17 48669274 48669563 -40834990 + AluSx SINE Alu 1 297 -15 182 284 63 32 chr17 48670532 48670627 -40833926 - MIR SINE MIR -157 105 8 613 248 209 66 chr17 48670779 48671100 -40833453 + L1MC4a LINE L1 5442 5716 -2092 899 105 0 15 chr17 48671100 48671233 -40833320 + FLAM_C SINE Alu 1 131 -2 613 248 209 66 chr17 48671233 48671352 -40833201 + L1MC4a LINE L1 5716 5817 -1991 2319 78 0 0 chr17 48671352 48671647 -40832906 - AluY SINE Alu -16 295 1 613 248 209 66 chr17 48671647 48671795 -40832758 + L1MC4a LINE L1 5817 6115 -1693 2226 89 0 0 chr17 48671833 48672163 -40832390 - AluY SINE Alu 0 311 1 782 160 7 21 chr17 48672475 48672641 -40831912 - FLAM_C SINE Alu 0 143 2 211 220 198 55 chr17 48672642 48672733 -40831820 - MIR SINE MIR -157 105 2 236 318 0 0 chr17 48672836 48672902 -40831651 + GA-rich Low_complexity Low_complexity 1 66 0 1297 190 19 30 chr17 48673676 48673944 -40830609 + AluJb SINE Alu 1 265 -47 345 92 40 0 chr17 48673944 48674020 -40830533 + (TA)n Simple_repeat Simple_repeat 2 80 0 220 181 85 85 chr17 48674339 48674433 -40830120 + MER5A DNA MER1_type 11 104 -85 202 295 105 21 chr17 48674366 48674461 -40830092 - MER5A DNA MER1_type -21 168 66 * 196 143 167 0 chr17 48674659 48674701 -40829852 + L3 LINE CR1 1320 1368 -209 2098 113 3 0 chr17 48675024 48675317 -40829236 + AluSg SINE Alu 1 294 -16 489 184 0 0 chr17 48675383 48675459 -40829094 - MER58B DNA MER1_type -19 322 247 300 233 70 47 chr17 48676184 48676270 -40828283 - L1ME4a LINE L1 -56 6065 5978 940 133 13 19 chr17 48676552 48676710 -40827843 + FRAM SINE Alu 1 157 -19 430 269 69 14 chr17 48676720 48676865 -40827688 + MIR SINE MIR 33 185 -77 279 95 24 0 chr17 48676915 48676957 -40827596 - U7 snRNA snRNA -6 57 15 1935 122 0 44 chr17 48676960 48677106 -40827447 + AluSx SINE Alu 1 152 -167 2303 67 3 0 chr17 48677106 48677406 -40827147 + AluY SINE Alu 1 301 -10 1935 122 0 44 chr17 48677406 48677591 -40826962 + AluSx SINE Alu 152 319 0 395 221 52 0 chr17 48677631 48677708 -40826845 + L2 LINE L2 3186 3266 -6 313 269 113 43 chr17 48677741 48677882 -40826671 + L1ME4a LINE L1 5902 6052 -69 4721 142 61 41 chr17 48677936 48678069 -40826484 - L1MB7 LINE L1 -5 6179 6050 2027 110 0 3 chr17 48678069 48678395 -40826158 + AluSx SINE Alu 1 325 0 4721 142 61 41 chr17 48678395 48679338 -40825215 - L1MB7 LINE L1 -134 6050 5087 353 22 22 0 chr17 48681282 48681328 -40823225 + (GGGTG)n Simple_repeat Simple_repeat 4 50 0 398 270 74 27 chr17 48681558 48681706 -40822847 - MIR SINE MIR -39 223 69 4765 122 101 7 chr17 48681777 48682603 -40821950 + MER4D LTR ERV1 1 903 0 1686 106 3 75 chr17 48683505 48683798 -40820755 + AluSx SINE Alu 1 272 -40 189 0 0 0 chr17 48683798 48683819 -40820734 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 2424 47 0 3 chr17 48683829 48684151 -40820402 + AluY SINE Alu 6 326 0 22 0 0 0 chr17 48684160 48684182 -40820371 + AT_rich Low_complexity Low_complexity 1 22 0 2292 53 32 0 chr17 48684190 48684473 -40820080 + AluY SINE Alu 1 292 -19 389 189 81 0 chr17 48685140 48685214 -40819339 - MIR SINE MIR -70 192 113 410 301 10 10 chr17 48686178 48686281 -40818272 + L2 LINE L2 3207 3309 -4 2115 101 7 3 chr17 48686545 48686852 -40817701 + AluSp SINE Alu 1 308 -5 845 242 33 90 chr17 48688612 48688726 -40815827 + L1MB7 LINE L1 1448 1567 -4817 721 273 28 31 chr17 48688726 48689015 -40815538 + AluJb SINE Alu 3 290 -12 845 242 33 90 chr17 48689015 48689235 -40815318 + L1MB7 LINE L1 1567 1763 -4621 2051 136 0 0 chr17 48689236 48689544 -40815009 + AluSx SINE Alu 2 309 -3 418 266 46 23 chr17 48689554 48689727 -40814826 + L1MB7 LINE L1 1991 2167 -4217 927 192 6 0 chr17 48689727 48689899 -40814654 - AluJo SINE Alu -139 173 1 2217 88 0 19 chr17 48689906 48690224 -40814329 - AluSx SINE Alu 0 312 1 246 146 0 0 chr17 48690294 48690335 -40814218 - L1P4 LINE L1 -417 5751 5711 * 1886 227 22 12 chr17 48690329 48690835 -40813718 + L1MB7 LINE L1 4819 5329 -1053 4204 184 39 22 chr17 48691016 48692071 -40812482 + L1MB7 LINE L1 5332 6401 -19 182 258 117 100 chr17 48692134 48692254 -40812299 - MIR3 SINE MIR -72 136 15 762 169 0 0 chr17 48692509 48692627 -40811926 + FLAM_C SINE Alu 1 118 -15 21 0 0 0 chr17 48693008 48693029 -40811524 + AT_rich Low_complexity Low_complexity 1 21 0 800 128 0 16 chr17 48693049 48693174 -40811379 - FLAM_C SINE Alu -19 124 2 2049 125 3 16 chr17 48693952 48694263 -40810290 - AluSx SINE Alu -5 307 1 316 280 206 21 chr17 48694335 48694524 -40810029 + MIR SINE MIR 20 243 -19 618 233 6 78 chr17 48694763 48694943 -40809610 + MIR SINE MIR 63 229 -33 304 273 0 0 chr17 48694909 48694975 -40809578 - MIR SINE MIR -10 252 187 * 597 216 10 31 chr17 48695833 48695984 -40808569 + LTR39 LTR ERV1 475 783 0 434 204 132 79 chr17 48696123 48696275 -40808278 - MER69 DNA AcHobo 0 2526 18 311 145 43 58 chr17 48696912 48696981 -40807572 + L2 LINE L2 3201 3268 -4 1939 108 22 0 chr17 48697072 48697373 -40807180 - AluSx SINE Alu 0 307 1 685 85 0 21 chr17 48697908 48698002 -40806551 + AluS SINE Alu 2 93 -220 1741 110 4 0 chr17 48698007 48698253 -40806300 - AluSq SINE Alu -56 257 11 996 111 7 13 chr17 48698379 48698532 -40806021 - AluSx SINE Alu -159 153 2 217 263 0 35 chr17 48698628 48698685 -40805868 + MIR SINE MIR 96 150 -58 1032 212 33 0 chr17 48699124 48699336 -40805217 - MER20 DNA MER1_type 0 219 1 1942 100 4 4 chr17 48699941 48700248 -40804305 + AluY SINE Alu 1 307 0 597 234 23 0 chr17 48700624 48700752 -40803801 + MER5A DNA MER1_type 37 167 -22 238 270 102 66 chr17 48701116 48701253 -40803300 + L2 LINE L2 3172 3313 0 23 33 0 0 chr17 48701753 48701783 -40802770 + AT_rich Low_complexity Low_complexity 1 30 0 697 263 38 16 chr17 48701914 48702100 -40802453 - MER58C DNA MER1_type -11 204 15 234 314 0 68 chr17 48702282 48702400 -40802153 - MIR3 SINE MIR -3 205 96 21 0 0 0 chr17 48702950 48702971 -40801582 + AT_rich Low_complexity Low_complexity 1 21 0 686 168 17 0 chr17 48702971 48703090 -40801463 - FLAM_C SINE Alu -12 121 1 312 195 116 79 chr17 48703091 48703261 -40801292 - L1ME3A LINE L1 -49 6115 5931 2057 124 0 3 chr17 48703271 48703569 -40800984 + AluSq SINE Alu 1 297 -16 1326 109 31 0 chr17 48703569 48703761 -40800792 - AluSq SINE Alu -114 199 2 957 321 99 12 chr17 48703913 48704511 -40800042 + L1MC4a LINE L1 5284 5933 -1875 309 280 26 83 chr17 48704543 48704696 -40799857 + L1ME4a LINE L1 5939 6080 -41 1755 181 3 0 chr17 48704696 48705006 -40799547 + AluJb SINE Alu 1 311 -1 309 280 26 83 chr17 48705006 48705045 -40799508 + L1ME4a LINE L1 6080 6120 -1 227 331 60 36 chr17 48705969 48706135 -40798418 + L2 LINE L2 2715 2884 -430 2421 66 0 10 chr17 48706362 48706667 -40797886 - AluY SINE Alu -9 302 1 887 228 66 0 chr17 48706818 48707029 -40797524 - MIR SINE MIR -25 237 13 246 62 0 0 chr17 48710203 48710235 -40794318 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 1982 116 7 0 chr17 48710920 48711224 -40793329 + AluSq SINE Alu 1 306 0 26 30 0 0 chr17 48711357 48711390 -40793163 + AT_rich Low_complexity Low_complexity 1 33 0 1452 155 59 50 chr17 48711576 48711850 -40792703 - Tigger3(Golem) DNA MER2_type 0 3029 2750 2269 112 0 3 chr17 48711850 48712163 -40792390 + AluSx SINE Alu 1 312 0 1452 155 59 50 chr17 48712163 48712191 -40792362 - Tigger3(Golem) DNA MER2_type -279 2750 2724 440 225 56 0 chr17 48712185 48712274 -40792279 - Tigger3(Golem) DNA MER2_type -2935 94 1 * 2169 120 0 0 chr17 48712750 48713058 -40791495 - AluSg SINE Alu -2 308 1 1772 94 144 0 chr17 48713060 48713316 -40791237 - AluSp SINE Alu -10 293 1 1500 182 45 0 chr17 48713592 48713883 -40790670 - AluJo SINE Alu -8 304 1 347 270 93 93 chr17 48714810 48715069 -40789484 - MIR SINE MIR 0 262 4 1774 130 36 0 chr17 48715800 48716077 -40788476 + AluSx SINE Alu 1 287 -25 1510 135 92 39 chr17 48716079 48716360 -40788193 + AluSx SINE Alu 1 296 -16 1979 133 3 0 chr17 48716583 48716876 -40787677 + AluSg SINE Alu 1 294 -16 1557 189 17 0 chr17 48716931 48717227 -40787326 + AluJo SINE Alu 11 311 -1 332 71 0 0 chr17 48717289 48717331 -40787222 - 5S rRNA rRNA -79 42 1 2213 78 0 0 chr17 48717452 48717735 -40786818 + AluSc SINE Alu 1 283 -26 220 162 0 27 chr17 48717735 48717809 -40786744 + (TTAA)n Simple_repeat Simple_repeat 1 72 0 256 290 52 58 chr17 48719179 48719334 -40785219 + L2 LINE L2 3160 3313 0 2400 61 7 3 chr17 48719424 48719719 -40784834 - AluY SINE Alu -14 297 2 189 0 0 0 chr17 48719908 48719929 -40784624 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2099 119 31 0 chr17 48720049 48720342 -40784211 + AluSq SINE Alu 1 302 -11 2039 113 21 7 chr17 48721180 48721463 -40783090 + AluSx SINE Alu 1 287 -25 651 165 70 0 chr17 48721475 48721590 -40782963 + FLAM_A SINE Alu 1 123 -10 1181 96 0 19 chr17 48721602 48721758 -40782795 - AluSq SINE Alu -160 153 1 300 138 154 0 chr17 48721758 48721823 -40782730 - MER5A DNA MER1_type -113 76 2 2028 113 10 45 chr17 48772092 48772401 -40732152 - AluSq SINE Alu -15 298 1 537 288 190 12 chr17 48772438 48772624 -40731929 + L2 LINE L2 2925 3077 -236 1757 155 4 7 chr17 48772624 48772901 -40731652 + AluJb SINE Alu 35 310 -2 537 288 190 12 chr17 48772901 48773040 -40731513 + L2 LINE L2 3077 3308 -5 1782 159 0 20 chr17 48773475 48773776 -40730777 + AluJb SINE Alu 1 295 -17 200 321 165 9 chr17 48774005 48774114 -40730439 + MIR3 SINE MIR 43 168 -40 1507 171 62 7 chr17 48774447 48774752 -40729801 + MER33 DNA MER1_type 1 322 -2 2143 97 11 0 chr17 48778649 48778969 -40725584 + AluSx SINE Alu 1 323 0 23 54 0 0 chr17 48779378 48779415 -40725138 + AT_rich Low_complexity Low_complexity 1 37 0 1452 157 71 29 chr17 48779934 48780214 -40724339 + AluJo SINE Alu 1 292 -20 1364 136 0 55 chr17 48781057 48781277 -40723276 - AluJb SINE Alu -18 294 87 1278 147 216 0 chr17 48782803 48783048 -40721505 + AluJo SINE Alu 1 298 -4 1948 137 40 0 chr17 48783110 48783387 -40721166 + AluJb SINE Alu 1 288 -24 254 230 16 56 chr17 48784616 48784742 -40719811 + (CCGCG)n Simple_repeat Simple_repeat 2 122 0 2266 103 7 0 chr17 48785284 48785594 -40718959 - AluSx SINE Alu 0 312 1 282 240 73 80 chr17 48786040 48786149 -40718404 + MIR SINE MIR 46 155 -107 2348 94 0 0 chr17 48786149 48786448 -40718105 - AluSx SINE Alu -13 299 1 282 240 73 80 chr17 48786448 48786488 -40718065 + MIR SINE MIR 155 194 -68 2435 34 44 0 chr17 48787221 48787515 -40717038 + AluY SINE Alu 1 307 -4 2560 56 7 0 chr17 48788464 48788768 -40715785 - AluY SINE Alu -5 306 1 26 0 0 0 chr17 48788836 48788862 -40715691 + AT_rich Low_complexity Low_complexity 1 26 0 1533 95 69 39 chr17 48788976 48789207 -40715346 - THE1B LTR MaLR -126 238 1 1233 103 0 0 chr17 48789465 48789620 -40714933 + AluSx SINE Alu 1 155 -157 29 28 0 0 chr17 48790490 48790526 -40714027 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr17 48791107 48791139 -40713414 + AT_rich Low_complexity Low_complexity 1 32 0 1004 163 10 59 chr17 48791237 48791440 -40713113 + MLT1B LTR MaLR 3 195 -195 2178 126 0 0 chr17 48791856 48792165 -40712388 + AluSx SINE Alu 1 309 -3 273 250 28 0 chr17 48793236 48793308 -40711245 - MIR3 SINE MIR -12 196 123 1597 121 117 16 chr17 48793308 48793589 -40710964 + AluY SINE Alu 1 307 0 185 116 0 23 chr17 48795459 48795502 -40709051 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 2263 87 21 3 chr17 48796434 48796721 -40707832 - AluSq SINE Alu -21 292 1 1239 178 110 4 chr17 48797098 48797337 -40707216 - MER58B DNA MER1_type -2079 341 70 243 0 0 0 chr17 48797337 48797364 -40707189 + (CA)n Simple_repeat Simple_repeat 2 28 0 1239 178 110 4 chr17 48797364 48797388 -40707165 - MER58B DNA MER1_type -2350 70 50 2228 126 0 0 chr17 48797557 48797858 -40706695 - AluSx SINE Alu -10 302 2 740 96 0 0 chr17 48797886 48797990 -40706563 - AluSp/q SINE Alu -1 312 209 2462 65 3 0 chr17 48798138 48798430 -40706123 + AluSp SINE Alu 1 293 -20 2290 114 0 13 chr17 48798712 48799028 -40705525 + AluSx SINE Alu 1 312 0 1536 173 81 0 chr17 48799117 48799389 -40705164 + AluJb SINE Alu 1 294 -18 239 354 118 0 chr17 48799905 48800049 -40704504 + L2 LINE L2 2204 2364 -950 701 249 30 30 chr17 48800049 48800286 -40704267 + L2 LINE L2 2480 2716 -598 1993 95 0 11 chr17 48800370 48800634 -40703919 - AluY SINE Alu -12 299 39 1267 255 25 69 chr17 48800736 48801128 -40703425 - L1MDa LINE L1 -3395 3145 2738 2103 136 3 0 chr17 48801128 48801430 -40703123 + AluSx SINE Alu 1 303 -9 2130 139 0 0 chr17 48801439 48801740 -40702813 + AluSx SINE Alu 1 301 -11 1267 255 25 69 chr17 48801740 48801846 -40702707 - L1MDa LINE L1 -3810 2730 2659 757 179 0 0 chr17 48801884 48802001 -40702552 - FLAM_C SINE Alu -25 118 2 592 219 111 39 chr17 48802003 48802398 -40702155 - L1MDa LINE L1 -3964 2576 2223 198 167 0 0 chr17 48802398 48802434 -40702119 + (TATG)n Simple_repeat Simple_repeat 3 38 0 188 199 39 45 chr17 48802402 48802558 -40701995 + (TATATG)n Simple_repeat Simple_repeat 2 156 0 * 2309 95 0 0 chr17 48802784 48803069 -40701484 - AluSc SINE Alu -24 285 1 268 293 13 0 chr17 48803072 48803147 -40701406 + L2 LINE L2 2221 2296 -1018 835 218 62 67 chr17 48803375 48803778 -40700775 + L1MDa LINE L1 1705 2085 -4341 328 226 0 12 chr17 48803779 48803863 -40700690 + MIR SINE MIR 164 246 -16 2280 102 10 0 chr17 48803863 48804167 -40700386 + AluSx SINE Alu 1 307 -5 325 227 142 35 chr17 48805191 48805332 -40699221 - MER5B DNA MER1_type 0 178 23 272 240 230 0 chr17 48805374 48805474 -40699079 - MER5A DNA MER1_type -6 183 61 303 125 156 0 chr17 48805665 48805729 -40698824 + MER5A DNA MER1_type 2 75 -114 1089 116 7 19 chr17 48805730 48805885 -40698668 + AluSq SINE Alu 1 153 -160 566 164 69 26 chr17 48805899 48806015 -40698538 - FLAM_A SINE Alu -12 121 1 1858 101 75 0 chr17 48806027 48806295 -40698258 - AluSq SINE Alu -25 288 1 287 216 160 4 chr17 48806347 48806468 -40698085 - MLT1F LTR MaLR -352 197 20 343 270 18 23 chr17 48807181 48807398 -40697155 - L1ME LINE L1 -342 5779 5528 1583 203 61 50 chr17 48807429 48807888 -40696665 + L1MC4a LINE L1 6130 6593 -1215 521 209 12 104 chr17 48807887 48807981 -40696572 + L1MC4 LINE L1 7784 7858 -184 * 2147 118 7 0 chr17 48807981 48808270 -40696283 - AluSx SINE Alu -21 291 1 521 209 12 104 chr17 48808270 48808338 -40696215 + L1MC4 LINE L1 7858 7931 -111 713 151 8 0 chr17 48808352 48808478 -40696075 + L1MC4 LINE L1 7914 8040 -2 1699 157 52 7 chr17 48808934 48809220 -40695333 - AluJb SINE Alu -11 301 3 23 0 0 0 chr17 48809224 48809247 -40695306 + AT_rich Low_complexity Low_complexity 1 23 0 1752 65 4 76 chr17 48809362 48809625 -40694928 + AluY SINE Alu 68 311 0 2132 99 7 0 chr17 48809959 48810242 -40694311 + AluSx SINE Alu 1 285 -27 1092 187 6 128 chr17 48811290 48811627 -40692926 + AluSp SINE Alu 10 305 -8 1988 130 7 0 chr17 48811689 48811981 -40692572 + AluSx SINE Alu 1 294 -18 389 150 0 0 chr17 48812100 48812160 -40692393 - AluSp SINE Alu -169 134 75 1974 143 3 3 chr17 48812188 48812481 -40692072 - AluSx SINE Alu -19 293 1 213 222 0 19 chr17 48812735 48812789 -40691764 + L2 LINE L2 3261 3313 0 297 214 57 79 chr17 48812950 48813090 -40691463 + MER20B DNA MER1_type 1 137 -646 653 232 226 11 chr17 48813174 48813364 -40691189 + MER21B LTR ERV1 1 231 -632 180 0 0 0 chr17 48814226 48814246 -40690307 + (CCG)n Simple_repeat Simple_repeat 2 21 0 1136 123 0 12 chr17 48814499 48814662 -40689891 - AluSq SINE Alu -151 162 2 22 0 0 0 chr17 48814808 48814830 -40689723 + AT_rich Low_complexity Low_complexity 1 22 0 354 250 87 97 chr17 48815057 48815437 -40689116 - L1M4 LINE L1 -2017 4129 3754 2327 76 0 3 chr17 48815443 48815731 -40688822 - AluSq SINE Alu -26 287 1 2079 176 52 117 chr17 48815782 48816145 -40688408 - L1ME1 LINE L1 -297 5869 5484 2504 72 0 3 chr17 48816145 48816452 -40688101 - AluY SINE Alu -5 306 1 2079 176 52 117 chr17 48816452 48816616 -40687937 - L1ME1 LINE L1 -682 5484 5311 1769 167 3 33 chr17 48816616 48816921 -40687632 - AluJo SINE Alu -16 296 1 2079 176 52 117 chr17 48816921 48816982 -40687571 - L1ME1 LINE L1 -855 5311 5248 2496 71 3 0 chr17 48816982 48817292 -40687261 - AluY SINE Alu 0 311 1 1746 159 7 48 chr17 48817292 48817600 -40686953 - AluJb SINE Alu -16 296 1 2079 176 52 117 chr17 48817600 48817824 -40686729 - L1ME1 LINE L1 -916 5250 5073 861 152 157 10 chr17 48817832 48818030 -40686523 - MER58B DNA MER1_type -10 331 105 2520 140 38 69 chr17 48818164 48818685 -40685868 - L1MA4 LINE L1 -27 6273 5769 702 183 8 23 chr17 48818691 48818822 -40685731 - FLAM_C SINE Alu 0 133 5 1827 114 0 0 chr17 48818831 48819077 -40685476 - AluSg SINE Alu -4 306 61 692 317 150 5 chr17 48819325 48819744 -40684809 - MLT1G1 LTR MaLR -7 588 109 670 178 66 56 chr17 48820004 48820201 -40684352 - L1MC4a LINE L1 -1480 6328 6130 566 258 119 88 chr17 48820241 48820522 -40684031 + L1ME4a LINE L1 5535 5806 -315 2091 133 7 0 chr17 48820522 48820816 -40683737 + AluSx SINE Alu 1 296 -16 566 258 119 88 chr17 48820816 48820896 -40683657 + L1ME4a LINE L1 5806 5882 -239 1828 175 0 23 chr17 48820896 48821204 -40683349 - AluJb SINE Alu -11 301 1 566 258 119 88 chr17 48821204 48821244 -40683309 + L1ME4a LINE L1 5882 5919 -202 1774 127 0 4 chr17 48821244 48821496 -40683057 + AluSx SINE Alu 1 251 -61 566 258 119 88 chr17 48821496 48821657 -40682896 + L1ME4a LINE L1 5919 6116 -5 1772 148 3 87 chr17 48821925 48822257 -40682296 + AluSx SINE Alu 1 304 -8 3877 247 118 40 chr17 48822261 48823545 -40681008 - HAL1 LINE L1 -3 2504 1322 2232 114 0 29 chr17 48823545 48823861 -40680692 - AluSg1 SINE Alu 0 309 3 3877 247 118 40 chr17 48823861 48823968 -40680585 - HAL1 LINE L1 -1185 1322 1225 1944 196 22 3 chr17 48823968 48824326 -40680227 + MLT1A1 LTR MaLR 1 365 0 3877 247 118 40 chr17 48824326 48824542 -40680011 - HAL1 LINE L1 -1282 1225 770 288 111 0 0 chr17 48825712 48825757 -40678796 + (TG)n Simple_repeat Simple_repeat 2 46 0 195 100 0 0 chr17 48825770 48825800 -40678753 + (TC)n Simple_repeat Simple_repeat 2 31 0 786 170 0 22 chr17 48825991 48826126 -40678427 + FLAM_C SINE Alu 2 133 0 375 274 114 65 chr17 48827148 48827439 -40677114 + L1ME4a LINE L1 5677 5995 -126 2295 86 3 20 chr17 48827439 48827742 -40676811 + AluSx SINE Alu 1 298 -14 375 274 114 65 chr17 48827742 48827862 -40676691 + L1ME4a LINE L1 5995 6108 -13 2020 108 22 4 chr17 48828258 48828571 -40675982 - AluSx SINE Alu 0 318 1 684 75 0 21 chr17 48829106 48829200 -40675353 + AluS SINE Alu 2 93 -219 1829 110 4 0 chr17 48829205 48829451 -40675102 - AluSq SINE Alu -56 257 11 982 131 7 13 chr17 48829577 48829730 -40674823 - AluSx SINE Alu -159 153 2 197 263 0 35 chr17 48829826 48829883 -40674670 + MIR SINE MIR 96 150 -58 1016 217 33 0 chr17 48830322 48830534 -40674019 - MER20 DNA MER1_type 0 219 1 2124 97 4 0 chr17 48831139 48831445 -40673108 + AluY SINE Alu 1 307 0 547 242 23 0 chr17 48831820 48831948 -40672605 + MER5A DNA MER1_type 37 167 -22 190 270 102 66 chr17 48832312 48832449 -40672104 + L2 LINE L2 3172 3313 0 23 33 0 0 chr17 48832949 48832979 -40671574 + AT_rich Low_complexity Low_complexity 1 30 0 710 263 38 16 chr17 48833110 48833296 -40671257 - MER58C DNA MER1_type -11 204 15 249 263 0 50 chr17 48833478 48833558 -40670995 - MIR3 SINE MIR -3 205 130 678 168 17 0 chr17 48834165 48834284 -40670269 - FLAM_C SINE Alu -12 121 1 315 195 116 79 chr17 48834285 48834455 -40670098 - L1ME3A LINE L1 -49 6115 5931 1834 116 0 0 chr17 48834465 48834706 -40669847 + AluSq SINE Alu 1 241 -72 302 262 102 99 chr17 48834755 48835049 -40669504 + L1ME4a LINE L1 5677 5971 -150 1970 151 3 0 chr17 48835055 48835353 -40669200 + AluSx SINE Alu 1 299 -13 224 320 45 13 chr17 48835687 48835863 -40668690 + MIR SINE MIR 10 192 -70 1665 157 10 67 chr17 48836173 48836486 -40668067 - AluJo SINE Alu -17 295 1 1227 199 45 8 chr17 48836528 48836794 -40667759 - AluJo SINE Alu -3 309 34 699 206 8 0 chr17 48836812 48836943 -40667610 - FLAM_C SINE Alu -1 132 1 1056 169 6 0 chr17 48837104 48837270 -40667283 + AluJb SINE Alu 134 300 -12 2215 124 0 0 chr17 48837426 48837725 -40666828 - AluSq SINE Alu -14 299 1 726 266 20 15 chr17 48837815 48838014 -40666539 + MLT1A2 LTR MaLR 175 374 0 2009 137 27 3 chr17 48838102 48838395 -40666158 - AluSx SINE Alu -12 300 1 1751 155 4 0 chr17 48838448 48838706 -40665847 - AluJo SINE Alu -15 297 39 944 95 48 0 chr17 48838806 48838932 -40665621 - AluSq/x SINE Alu -180 133 2 952 324 99 12 chr17 48839084 48839682 -40664871 + L1MC4a LINE L1 5284 5933 -1875 1958 166 3 0 chr17 48839867 48840175 -40664378 + AluJb SINE Alu 1 309 -3 197 299 47 39 chr17 48841149 48841276 -40663277 + L2 LINE L2 2715 2842 -472 2566 59 0 10 chr17 48841542 48841845 -40662708 - AluY SINE Alu -11 300 1 792 228 66 0 chr17 48841996 48842207 -40662346 - MIR SINE MIR -25 237 13 225 94 0 0 chr17 48845383 48845415 -40659138 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 2124 113 7 0 chr17 48846100 48846404 -40658149 + AluSq SINE Alu 1 306 0 26 30 0 0 chr17 48846537 48846570 -40657983 + AT_rich Low_complexity Low_complexity 1 33 0 1426 172 55 34 chr17 48846756 48847030 -40657523 - Tigger3(Golem) DNA MER2_type 0 3028 2761 2364 116 0 3 chr17 48847030 48847341 -40657212 + AluSx SINE Alu 1 310 -2 1426 172 55 34 chr17 48847341 48847441 -40657112 - Tigger3(Golem) DNA MER2_type -267 2761 1 1318 141 0 0 chr17 48847916 48848108 -40656445 - AluSg/x SINE Alu -2 310 119 2230 120 0 0 chr17 48848320 48848619 -40655934 - AluSx SINE Alu -13 299 1 1753 94 144 0 chr17 48848621 48848877 -40655676 - AluSp SINE Alu -10 293 1 1593 186 45 0 chr17 48849153 48849444 -40655109 - AluJo SINE Alu -8 304 1 249 299 70 13 chr17 48850373 48850530 -40654023 - MIR SINE MIR 0 262 97 1894 130 36 0 chr17 48851364 48851641 -40652912 + AluSx SINE Alu 1 287 -25 1620 135 92 39 chr17 48851643 48851924 -40652629 + AluSx SINE Alu 1 296 -16 2161 129 0 0 chr17 48852147 48852441 -40652112 + AluSg SINE Alu 1 294 -16 1706 182 17 0 chr17 48852496 48852792 -40651761 + AluJo SINE Alu 11 311 -1 329 71 0 0 chr17 48852854 48852896 -40651657 - 5S rRNA rRNA -79 42 1 2339 78 0 0 chr17 48853017 48853300 -40651253 + AluSc SINE Alu 1 283 -26 282 168 0 28 chr17 48853300 48853407 -40651146 + (TTAA)n Simple_repeat Simple_repeat 1 104 0 256 290 52 58 chr17 48854777 48854932 -40649621 + L2 LINE L2 3160 3313 0 2471 57 0 3 chr17 48855022 48855319 -40649234 - AluY SINE Alu -14 297 2 189 0 0 0 chr17 48855508 48855529 -40649024 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2053 120 34 0 chr17 48855649 48855941 -40648612 + AluSq SINE Alu 1 302 -11 551 256 151 23 chr17 48857096 48857315 -40647238 + MIR SINE MIR 14 260 -2 2064 127 0 0 chr17 48857511 48857820 -40646733 - AluSq SINE Alu 0 309 1 2067 111 13 7 chr17 48858120 48858426 -40646127 + AluSc SINE Alu 1 308 -1 244 265 59 0 chr17 48859473 48859541 -40645012 + MIR SINE MIR 74 145 -63 229 209 30 45 chr17 48859646 48859713 -40644840 - L2 LINE L2 -193 3079 3014 405 262 9 9 chr17 48859922 48860029 -40644524 - AluSc SINE Alu -125 184 78 41 21 0 0 chr17 48860660 48860708 -40643845 + AT_rich Low_complexity Low_complexity 1 48 0 411 73 0 0 chr17 48860760 48860815 -40643738 + (A)n Simple_repeat Simple_repeat 1 55 0 4461 111 10 13 chr17 48861948 48862642 -40641911 + L1MA2 LINE L1 5613 6304 0 2281 105 0 0 chr17 48863319 48863615 -40640938 - AluSx SINE Alu -16 296 1 238 191 0 0 chr17 48864526 48864568 -40639985 + L1ME LINE L1 5563 5604 -517 9837 193 85 23 chr17 48864698 48866639 -40637914 + Cheshire DNA MER1_type 1 2103 -317 1786 145 14 10 chr17 48866639 48866928 -40637625 + AluJo SINE Alu 6 295 -17 9837 193 85 23 chr17 48866928 48867245 -40637308 + Cheshire DNA MER1_type 2103 2399 -21 196 343 0 14 chr17 48867256 48867329 -40637224 - MER5A DNA MER1_type 0 189 118 181 324 0 14 chr17 48867281 48867355 -40637198 + MER5A DNA MER1_type 37 109 -80 * 1729 158 0 45 chr17 48867552 48867862 -40636691 - AluJb SINE Alu -16 296 1 1490 163 0 27 chr17 48868361 48868619 -40635934 + AluJo SINE Alu 1 251 -61 241 154 19 19 chr17 48869344 48869396 -40635157 + L1ME4a LINE L1 5959 6010 -111 2281 88 3 0 chr17 48869436 48869742 -40634811 - AluSp SINE Alu 0 307 1 769 146 16 16 chr17 48869979 48870102 -40634451 - FLAM_A SINE Alu -12 130 8 1942 130 13 54 chr17 48870487 48870621 -40633932 + AluSx SINE Alu 1 139 -173 2381 52 41 0 chr17 48870621 48870911 -40633642 + AluY SINE Alu 1 302 -9 1942 130 13 54 chr17 48870911 48871092 -40633461 + AluSx SINE Alu 139 303 -9 183 129 0 0 chr17 48871615 48871646 -40632907 + (A)n Simple_repeat Simple_repeat 1 31 0 336 305 78 14 chr17 48872071 48872212 -40632341 - MIR3 SINE MIR -25 183 34 739 170 0 0 chr17 48873399 48873511 -40631042 + FLAM_C SINE Alu 5 116 -27 1263 127 68 49 chr17 48873789 48874060 -40630493 - Tigger3(Golem) DNA MER2_type -108 2921 1 463 198 0 50 chr17 48874430 48874531 -40630022 + FLAM_A SINE Alu 4 99 -43 483 18 0 0 chr17 48874531 48874587 -40629966 + (GA)n Simple_repeat Simple_repeat 2 57 0 324 0 0 0 chr17 48874586 48874622 -40629931 + (TG)n Simple_repeat Simple_repeat 2 37 0 * 2283 108 0 0 chr17 48875493 48875789 -40628764 + AluSx SINE Alu 1 296 -16 1790 148 13 31 chr17 48875867 48876185 -40628368 + AluJo SINE Alu 1 312 0 2445 98 0 0 chr17 48876397 48876703 -40627850 + AluSg SINE Alu 1 306 -4 21 0 0 0 chr17 48877036 48877057 -40627496 + AT_rich Low_complexity Low_complexity 1 21 0 1677 62 0 0 chr17 48877068 48877262 -40627291 - AluY SINE Alu -117 194 1 2261 96 3 0 chr17 48877446 48877738 -40626815 - AluSp SINE Alu -9 304 12 372 242 189 7 chr17 48878010 48878163 -40626390 + L1ME4a LINE L1 5851 6031 -90 261 248 21 111 chr17 48879028 48879088 -40625465 + MIR3 SINE MIR 27 91 -117 1886 163 0 0 chr17 48879088 48879397 -40625156 + AluSx SINE Alu 1 309 0 261 248 21 111 chr17 48879397 48879502 -40625051 + MIR3 SINE MIR 91 181 -27 235 238 87 71 chr17 48879583 48879709 -40624844 + L2 LINE L2 3145 3272 0 284 306 102 16 chr17 48880007 48880252 -40624301 + L2 LINE L2 1805 2070 -1244 787 144 0 34 chr17 48880317 48880463 -40624090 + FLAM_C SINE Alu 3 143 0 305 307 18 93 chr17 48880472 48880697 -40623856 + L2 LINE L2 2131 2338 -976 1995 163 0 65 chr17 48880706 48880788 -40623765 - MER47A DNA MER2_type -1962 361 275 2339 102 0 0 chr17 48880788 48881083 -40623470 + AluSg SINE Alu 1 295 -15 1724 154 7 52 chr17 48881086 48881392 -40623161 - AluJb SINE Alu -20 292 1 1995 163 0 65 chr17 48881392 48881691 -40622862 - MER47A DNA MER2_type -2050 273 1 719 299 123 38 chr17 48881692 48882520 -40622033 + L2 LINE L2 2343 3292 -21 1925 118 43 0 chr17 48883174 48883454 -40621099 - AluSc SINE Alu -17 292 1 2246 109 7 0 chr17 48884740 48885044 -40619509 + AluSp SINE Alu 1 306 -7 2185 116 0 0 chr17 48885118 48885412 -40619141 + AluSx SINE Alu 1 294 -18 426 307 58 10 chr17 48885621 48885826 -40618727 - MIR SINE MIR -2 260 46 1828 178 3 0 chr17 48885955 48886248 -40618305 - AluJb SINE Alu -16 296 3 1539 215 3 13 chr17 48886504 48886811 -40617742 + AluJb SINE Alu 1 304 -8 777 154 0 29 chr17 48887180 48887316 -40617237 + FLAM_C SINE Alu 2 133 0 2174 127 0 0 chr17 48887437 48887736 -40616817 + AluSx SINE Alu 14 312 0 1930 144 41 0 chr17 48887901 48888192 -40616361 + AluSx SINE Alu 1 303 -9 299 353 6 12 chr17 48888602 48888766 -40615787 + MIR3 SINE MIR 1 160 -62 32 43 0 0 chr17 48888890 48888936 -40615617 + AT_rich Low_complexity Low_complexity 1 46 0 1515 169 0 4 chr17 48888952 48889200 -40615353 - AluJo SINE Alu -10 302 56 22 56 0 0 chr17 48889739 48889775 -40614778 + AT_rich Low_complexity Low_complexity 1 36 0 926 182 0 7 chr17 48889905 48890059 -40614494 + FRAM SINE Alu 1 153 -23 511 157 52 52 chr17 48890322 48890437 -40614116 - FLAM_A SINE Alu -10 132 18 23 0 0 0 chr17 48890485 48890508 -40614045 + AT_rich Low_complexity Low_complexity 1 23 0 1830 140 0 44 chr17 48891771 48892064 -40612489 - AluSx SINE Alu -11 301 22 249 255 94 67 chr17 48892387 48892536 -40612017 - MER5A DNA MER1_type -24 165 13 1695 188 10 10 chr17 48893111 48893420 -40611133 + AluJo SINE Alu 1 309 -3 2164 88 37 10 chr17 48893998 48894294 -40610259 + AluSp SINE Alu 1 304 -9 2173 121 0 0 chr17 48894820 48895118 -40609435 - AluSq SINE Alu -15 298 1 21 57 0 0 chr17 48895425 48895460 -40609093 + AT_rich Low_complexity Low_complexity 1 35 0 822 187 28 6 chr17 48895595 48895777 -40608776 - MER53 DNA DNA -3 186 1 1629 128 35 55 chr17 48895994 48896306 -40608247 + AluJb SINE Alu 4 309 -3 287 216 160 4 chr17 48896796 48896917 -40607636 + MLT1F LTR MaLR 20 197 -352 2029 103 48 0 chr17 48896969 48897265 -40607288 + AluSq SINE Alu 1 309 0 311 220 220 9 chr17 48897309 48897418 -40607135 + MLT1G LTR MaLR 143 274 -281 396 202 132 23 chr17 48897673 48897802 -40606751 + MLT1G LTR MaLR 440 582 -8 219 256 167 0 chr17 48898618 48898696 -40605857 + L2 LINE L2 3168 3258 -14 263 349 32 0 chr17 48898934 48899060 -40605493 + MIR3 SINE MIR 30 159 -49 1460 170 115 64 chr17 48899362 48899517 -40605036 + MLT1D LTR MaLR 1 147 -358 676 220 8 0 chr17 48899517 48899649 -40604904 - FLAM_A SINE Alu 0 133 1 1460 170 115 64 chr17 48899649 48899945 -40604608 + MLT1D LTR MaLR 147 475 -30 416 319 34 5 chr17 48900033 48900240 -40604313 - MIR SINE MIR -49 213 1 183 364 18 36 chr17 48900425 48900535 -40604018 - MIR SINE MIR -55 153 46 1890 123 40 33 chr17 48901450 48901752 -40602801 + AluSx SINE Alu 1 304 -8 1934 126 29 32 chr17 48902161 48902470 -40602083 - AluSx SINE Alu -4 308 1 1082 183 34 10 chr17 48902606 48902814 -40601739 + AluJo SINE Alu 86 298 -14 322 318 24 24 chr17 48902896 48903022 -40601531 - MIR SINE MIR -124 138 13 1054 91 0 0 chr17 48903112 48903244 -40601309 + AluSq/x SINE Alu 4 135 -178 1521 100 0 96 chr17 48903244 48903316 -40601237 + AluSq SINE Alu 84 161 -152 1683 99 0 0 chr17 48903316 48903528 -40601025 + AluSg/x SINE Alu 85 296 -16 1521 100 0 96 chr17 48903528 48903705 -40600848 + AluSq SINE Alu 161 309 -4 3780 120 4 2 chr17 48904324 48904850 -40599703 + MER1A DNA MER1_type 1 527 0 304 256 142 23 chr17 48904924 48905143 -40599410 + L2 LINE L2 2254 2498 -816 1099 139 35 0 chr17 48905336 48905508 -40599045 - AluSg/x SINE Alu -1 309 132 2287 111 7 0 chr17 48905508 48905805 -40598748 - AluSx SINE Alu -13 299 1 270 358 37 12 chr17 48905806 48906052 -40598501 + L2 LINE L2 2723 2974 -340 1241 180 0 18 chr17 48906355 48906583 -40597970 + AluJo SINE Alu 85 308 -4 2433 102 0 3 chr17 48906583 48906896 -40597657 + AluSx SINE Alu 1 312 0 394 316 19 32 chr17 48907117 48907275 -40597278 - L2 LINE L2 0 3272 3117 325 268 113 7 chr17 48907390 48907532 -40597021 - L1ME4a LINE L1 -2 6119 5963 258 138 0 0 chr17 48907560 48907605 -40596948 - L1MB7 LINE L1 0 6178 6134 1702 176 0 37 chr17 48907821 48908148 -40596405 + AluJo SINE Alu 1 316 0 2226 102 3 0 chr17 48908392 48908687 -40595866 + AluSg SINE Alu 1 296 -14 1274 164 154 19 chr17 48908980 48909298 -40595255 - MER46B DNA MER2_type 0 236 1 940 101 7 14 chr17 48910324 48910463 -40594090 - FLAM_C SINE Alu -5 138 1 22 70 0 0 chr17 48912015 48912058 -40592495 + GC_rich Low_complexity Low_complexity 1 43 0 228 167 14 56 chr17 48912093 48912165 -40592388 + C-rich Low_complexity Low_complexity 3 71 0 23 33 0 0 chr17 48912450 48912480 -40592073 + GC_rich Low_complexity Low_complexity 1 30 0 189 74 0 0 chr17 48912635 48912662 -40591891 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 27 29 0 0 chr17 48912796 48912830 -40591723 + GC_rich Low_complexity Low_complexity 1 34 0 1821 131 3 28 chr17 48913115 48913435 -40591118 - AluSx SINE Alu 0 312 1 201 185 25 37 chr17 48914801 48914854 -40589699 + GA-rich Low_complexity Low_complexity 3 56 -26 2254 110 0 7 chr17 48914854 48915162 -40589391 + AluSx SINE Alu 1 306 -6 201 185 25 37 chr17 48915162 48915189 -40589364 + GA-rich Low_complexity Low_complexity 56 82 0 792 169 12 62 chr17 48915292 48915452 -40589101 + L1MB5 LINE L1 5580 5731 -443 1438 155 122 11 chr17 48915453 48915724 -40588829 + AluJb SINE Alu 1 301 -11 946 192 0 6 chr17 48915724 48915880 -40588673 + AluJo/FRAM SINE Alu 135 289 -23 1269 117 9 47 chr17 48915883 48915967 -40588586 + L1PA15 LINE L1 5954 6040 -125 2283 84 0 7 chr17 48915967 48916283 -40588270 + AluSq SINE Alu 1 314 0 1269 117 9 47 chr17 48916283 48916411 -40588142 + L1PA15 LINE L1 6040 6159 -6 2144 143 99 23 chr17 48916413 48916853 -40587700 + L1MB5 LINE L1 5715 6174 0 46 33 0 0 chr17 48916864 48916924 -40587629 + AT_rich Low_complexity Low_complexity 1 60 0 1155 149 5 20 chr17 48916924 48917119 -40587434 - AluSg/x SINE Alu -2 308 116 1638 76 24 0 chr17 48917119 48917329 -40587224 - AluSg SINE Alu -95 215 1 967 251 97 36 chr17 48917935 48918265 -40586288 + MARNA DNA Mariner 228 577 -9 1435 152 130 19 chr17 48918610 48918880 -40585673 - AluJo SINE Alu -12 300 1 803 173 0 0 chr17 48918902 48919035 -40585518 - FLAM_C SINE Alu 0 133 1 351 0 0 0 chr17 48919393 48919432 -40585121 + (TG)n Simple_repeat Simple_repeat 2 40 0 1573 170 62 0 chr17 48919927 48920203 -40584350 - AluJo SINE Alu -19 293 1 1836 152 7 17 chr17 48920725 48921022 -40583531 - AluJo SINE Alu -18 294 1 876 144 0 0 chr17 48921217 48921335 -40583218 + FLAM_C SINE Alu 3 120 -23 213 175 0 0 chr17 48921339 48921379 -40583174 + (TA)n Simple_repeat Simple_repeat 2 41 0 2243 98 38 0 chr17 48921437 48921724 -40582829 - AluSg SINE Alu -12 298 1 2084 140 0 7 chr17 48922355 48922662 -40581891 - AluSx SINE Alu -7 305 1 392 286 14 14 chr17 48922820 48922960 -40581593 - MER115 DNA AcHobo -290 403 264 423 265 39 0 chr17 48923071 48923173 -40581380 - MER115 DNA AcHobo -587 106 1 2039 88 84 0 chr17 48923687 48923971 -40580582 + AluSx SINE Alu 5 312 0 497 29 0 29 chr17 48924372 48924440 -40580113 + (TTTCC)n Simple_repeat Simple_repeat 5 70 0 215 167 0 21 chr17 48924430 48924478 -40580075 + CT-rich Low_complexity Low_complexity 1 47 0 * 285 29 0 0 chr17 48924478 48924512 -40580041 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 1881 71 38 8 chr17 48924512 48924751 -40579802 - AluSq SINE Alu -65 248 3 2129 110 0 0 chr17 48925348 48925654 -40578899 - AluSx SINE Alu 0 306 1 1836 111 100 11 chr17 48925654 48925933 -40578620 - AluSq SINE Alu -9 304 1 1493 122 154 8 chr17 48926656 48926902 -40577651 - AluJb SINE Alu -30 282 1 2008 134 72 72 chr17 48927019 48927160 -40577393 + L1MC3 LINE L1 7300 7440 -345 2047 123 0 10 chr17 48927160 48927453 -40577100 + AluSx SINE Alu 16 305 -7 2008 134 72 72 chr17 48927453 48927797 -40576756 + L1MC3 LINE L1 7439 7785 0 234 0 0 0 chr17 48929396 48929422 -40575131 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 678 162 0 18 chr17 48933882 48933993 -40570560 + FLAM_C SINE Alu 2 110 -33 2548 78 0 3 chr17 48934277 48934583 -40569970 + AluY SINE Alu 1 305 -6 211 281 35 88 chr17 48934788 48934902 -40569651 + MIR SINE MIR 87 194 -68 2191 93 3 3 chr17 48935269 48935558 -40568995 - AluSx SINE Alu -23 289 1 493 311 51 21 chr17 48935732 48936066 -40568487 - L1ME4a LINE L1 -233 5888 5545 396 0 0 0 chr17 48936989 48937033 -40567520 + (A)n Simple_repeat Simple_repeat 1 44 0 324 291 58 0 chr17 48937858 48937961 -40566592 + L2 LINE L2 3197 3305 -8 317 100 100 0 chr17 48939176 48939236 -40565317 - MADE1 DNA Mariner -14 66 1 432 255 35 112 chr17 48939366 48939625 -40564928 + MIR SINE MIR 9 247 -15 244 138 0 52 chr17 48939716 48939774 -40564779 + LTR66 LTR ERVL 385 439 -171 567 226 52 0 chr17 48939850 48939965 -40564588 + MIR SINE MIR 31 151 -111 2463 90 0 0 chr17 48940502 48940813 -40563740 - AluY SINE Alu 0 311 1 25 0 0 0 chr17 48940832 48940857 -40563696 + AT_rich Low_complexity Low_complexity 1 25 0 1945 171 0 3 chr17 48940915 48941207 -40563346 + AluSx SINE Alu 1 291 -21 768 181 8 0 chr17 48941407 48941534 -40563019 + FLAM_C SINE Alu 1 128 -5 204 40 0 0 chr17 48941546 48941571 -40562982 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 340 304 11 0 chr17 48941706 48941798 -40562755 + MIR SINE MIR 31 123 -85 1669 198 0 10 chr17 48941908 48942206 -40562347 + AluJo SINE Alu 1 295 -17 1651 195 0 3 chr17 48942208 48942500 -40562053 + AluJo SINE Alu 1 291 -21 705 137 0 0 chr17 48942503 48942605 -40561948 + AluJ SINE Alu 2 103 -209 6629 74 16 0 chr17 48942637 48943802 -40560751 - L1PA8A LINE L1 -1 6130 4967 62 63 0 0 chr17 48943807 48943918 -40560635 + AT_rich Low_complexity Low_complexity 1 111 0 365 147 15 0 chr17 48943922 48943990 -40560563 - MER5A DNA MER1_type -80 109 41 2117 107 36 0 chr17 48944153 48944434 -40560119 + AluSq SINE Alu 2 292 -21 1233 181 13 26 chr17 48944769 48944995 -40559558 + AluJb SINE Alu 83 305 -7 2212 174 13 3 chr17 48945256 48945630 -40558923 + MSTB LTR MaLR 1 378 -48 2338 62 0 3 chr17 48945641 48945933 -40558620 + AluY SINE Alu 1 291 -20 322 338 56 28 chr17 48945946 48946230 -40558323 + L3 LINE CR1 481 772 -805 2306 78 0 17 chr17 48946616 48946912 -40557641 + AluY SINE Alu 1 291 -20 318 344 44 16 chr17 48947026 48947209 -40557344 + L3 LINE CR1 585 772 -805 2151 96 23 17 chr17 48947331 48947632 -40556921 + AluSq SINE Alu 2 304 -9 821 206 14 0 chr17 48948838 48948984 -40555569 + FRAM SINE Alu 5 152 -24 373 280 42 49 chr17 48949032 48949175 -40555378 + MIR3 SINE MIR 17 158 -50 451 285 23 8 chr17 48949232 48949362 -40555191 + MIR SINE MIR 37 168 -94 1810 160 7 3 chr17 48949395 48949682 -40554871 - AluJb SINE Alu -7 305 18 591 342 59 47 chr17 48949740 48950564 -40553989 + L2 LINE L2 2255 3090 -182 1025 150 12 0 chr17 48950625 48950792 -40553761 + L1MB3 LINE L1 5686 5854 -329 257 345 62 0 chr17 48950814 48950927 -40553626 + L2 LINE L2 3136 3255 -17 1868 153 0 27 chr17 48951171 48951466 -40553087 + AluJb SINE Alu 1 287 -25 324 289 104 29 chr17 48951572 48951745 -40552808 - MIR SINE MIR -69 193 8 240 176 67 36 chr17 48951975 48952095 -40552458 + (TA)n Simple_repeat Simple_repeat 2 131 -40 2283 86 0 0 chr17 48952095 48952405 -40552148 - AluSc SINE Alu 0 310 1 240 176 67 36 chr17 48952405 48952448 -40552105 + (TA)n Simple_repeat Simple_repeat 131 171 0 778 194 0 7 chr17 48952652 48952791 -40551762 + FLAM_C SINE Alu 4 141 -2 591 151 38 19 chr17 48952791 48952950 -40551603 + GA-rich Low_complexity Low_complexity 1 162 0 472 179 0 188 chr17 48953132 48953355 -40551198 - MIR SINE MIR -66 196 16 2251 99 0 0 chr17 48954258 48954577 -40549976 - AluSx SINE Alu 0 319 1 1506 158 42 4 chr17 48954828 48954990 -40549563 - AluJb SINE Alu -11 301 124 207 0 0 0 chr17 48954990 48955013 -40549540 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1506 158 42 4 chr17 48955013 48955115 -40549438 - AluJb SINE Alu -188 124 27 281 273 75 69 chr17 48955153 48955337 -40549216 + L2 LINE L2 1946 2134 -1180 2696 49 6 0 chr17 48955337 48955663 -40548890 - L1PA6 LINE L1 0 6154 5827 281 273 75 69 chr17 48955663 48955797 -40548756 + L2 LINE L2 2134 2266 -1048 1025 126 13 142 chr17 48955810 48955922 -40548631 + MER3 DNA MER1_type 2 127 -82 653 150 94 47 chr17 48955922 48956049 -40548504 + FLAM_C SINE Alu 1 133 0 1025 126 13 142 chr17 48956049 48956129 -40548424 + MER3 DNA MER1_type 127 160 -49 2131 114 0 13 chr17 48956129 48956428 -40548125 + AluSg SINE Alu 14 308 -2 1025 126 13 142 chr17 48956428 48956473 -40548080 + MER3 DNA MER1_type 160 209 0 623 264 145 84 chr17 48956877 48957272 -40547281 + LTR33 LTR ERVL 1 433 -88 1618 146 16 71 chr17 48957272 48957581 -40546972 - AluJo SINE Alu -20 292 1 623 264 145 84 chr17 48957581 48957674 -40546879 + LTR33 LTR ERVL 433 519 -2 1645 196 0 36 chr17 48958087 48958393 -40546160 + AluJb SINE Alu 1 295 -17 21 0 0 0 chr17 48958399 48958420 -40546133 + AT_rich Low_complexity Low_complexity 1 21 0 255 296 128 35 chr17 48958420 48958646 -40545907 - MIR SINE MIR -2 260 14 2243 56 56 3 chr17 48958687 48958972 -40545581 + AluY SINE Alu 1 300 -11 569 168 8 76 chr17 48958988 48959119 -40545434 + MLT1C LTR MaLR 1 122 -268 684 174 0 0 chr17 48959124 48959239 -40545314 + AluJb SINE Alu 2 116 -196 199 187 33 20 chr17 48959242 48959392 -40545161 + (TA)n Simple_repeat Simple_repeat 1 152 0 295 201 52 23 chr17 48959416 48959590 -40544963 + (TA)n Simple_repeat Simple_repeat 2 180 0 866 227 31 74 chr17 48959596 48959972 -40544581 + MLT1C LTR MaLR 113 467 0 465 137 0 0 chr17 48960144 48960217 -40544336 - FLAM_A SINE Alu -4 138 66 2276 115 0 0 chr17 48960289 48960601 -40543952 - AluSx SINE Alu 0 312 1 1621 75 10 0 chr17 48961414 48961615 -40542938 + AluSx SINE Alu 1 203 -109 1633 132 0 28 chr17 48961715 48961965 -40542588 - AluJb SINE Alu -65 247 5 339 129 97 0 chr17 48962012 48962074 -40542479 + FLAM_A SINE Alu 66 133 0 2114 126 0 0 chr17 48962783 48963116 -40541437 - AluSq SINE Alu 0 333 1 1120 163 0 0 chr17 48963135 48963301 -40541252 - 7SLRNA srpRNA srpRNA -145 175 10 2025 123 0 55 chr17 48963710 48963829 -40540724 + AluSx SINE Alu 1 125 -187 428 0 0 19 chr17 48963829 48963882 -40540671 + (TAAAA)n Simple_repeat Simple_repeat 1 52 0 2025 123 0 55 chr17 48963882 48964087 -40540466 + AluSx SINE Alu 125 307 -5 2609 62 0 0 chr17 48964961 48965266 -40539287 + AluY SINE Alu 1 305 -6 301 287 38 14 chr17 48965274 48965393 -40539160 + MIR3 SINE MIR 36 162 -46 1632 107 83 24 chr17 48965534 48965787 -40538766 - AluSx SINE Alu -44 268 1 2258 109 20 0 chr17 48966934 48967238 -40537315 + AluSx SINE Alu 1 310 -2 402 182 102 0 chr17 48967495 48967583 -40536970 + MER3 DNA MER1_type 66 162 -47 816 202 17 12 chr17 48967586 48967759 -40536794 + MER3 DNA MER1_type 2234 2407 0 260 51 0 26 chr17 48967759 48967798 -40536755 + (TTTC)n Simple_repeat Simple_repeat 4 41 0 2009 158 0 6 chr17 48967846 48968157 -40536396 - AluSx SINE Alu -3 309 1 599 138 87 189 chr17 48968160 48968414 -40536139 + MER3 DNA MER1_type 2357 2584 0 512 294 46 20 chr17 48968559 48968756 -40535797 - MIR SINE MIR -8 254 53 1847 77 0 0 chr17 48969019 48969241 -40535312 - AluSc SINE Alu -87 222 1 798 180 0 0 chr17 48969461 48969583 -40534970 + FLAM_C SINE Alu 3 124 -9 2302 84 30 7 chr17 48969591 48969889 -40534664 + AluY SINE Alu 1 305 -6 1089 133 0 7 chr17 48969925 48970076 -40534477 + AluJo SINE Alu 87 236 -76 826 131 0 31 chr17 48970076 48970206 -40534347 + AluJo/FRAM SINE Alu 178 303 -9 338 297 194 0 chr17 48970209 48970364 -40534189 - L2 LINE L2 -22 3291 3107 265 238 16 0 chr17 48970651 48970714 -40533839 + C-rich Low_complexity Low_complexity 3 66 0 300 350 0 0 chr17 48971602 48971705 -40532848 - L2 LINE L2 -2 3270 3168 2409 87 7 0 chr17 48971834 48972132 -40532421 - AluSx SINE Alu -12 300 1 665 289 58 29 chr17 48972232 48972578 -40531975 + LTR16C LTR ERVL 71 426 -65 279 188 0 0 chr17 48972588 48972636 -40531917 - MIR SINE MIR -98 164 117 1797 151 0 86 chr17 48972711 48973049 -40531504 - AluJb SINE Alu -3 309 1 1776 168 0 17 chr17 48973721 48974013 -40530540 + AluJo SINE Alu 1 287 -25 461 281 55 98 chr17 48974415 48974671 -40529882 - L2 LINE L2 0 3272 3028 185 322 109 38 chr17 48974730 48974941 -40529612 - L2 LINE L2 -912 2402 2177 1903 119 4 0 chr17 48975344 48975596 -40528957 - AluSq SINE Alu -60 253 1 423 0 0 0 chr17 48976458 48976505 -40528048 + (TG)n Simple_repeat Simple_repeat 1 47 0 1410 206 64 49 chr17 48977232 48977365 -40527188 - MSTD LTR MaLR 0 396 267 2540 73 0 0 chr17 48977365 48977665 -40526888 - AluY SINE Alu -11 300 1 1410 206 64 49 chr17 48977665 48977919 -40526634 - MSTD LTR MaLR -129 267 3 327 251 48 102 chr17 48978244 48978411 -40526142 - MIR SINE MIR -26 236 79 2368 70 3 20 chr17 48978549 48978849 -40525704 + AluY SINE Alu 1 295 -16 767 123 0 0 chr17 48979671 48979785 -40524768 - MSTB2 LTR MaLR 0 457 344 202 337 12 0 chr17 48979936 48980022 -40524531 + L2 LINE L2 2891 2977 -295 237 256 33 44 chr17 48980085 48980175 -40524378 + MLT1I LTR MaLR 130 218 -191 230 191 265 0 chr17 48980289 48980357 -40524196 + MLT1I LTR MaLR 324 409 0 421 310 14 12 chr17 48980539 48980668 -40523885 + MIR SINE MIR 7 137 -71 384 284 68 0 chr17 48981043 48981233 -40523320 - L1MEc LINE L1 -2228 3987 3785 2106 246 42 45 chr17 48981236 48981725 -40522828 - MER21B LTR ERV1 -78 785 297 2384 97 0 0 chr17 48981725 48982023 -40522530 - AluSx SINE Alu -1 311 14 2106 246 42 45 chr17 48982023 48982155 -40522398 - MER21B LTR ERV1 -566 297 166 828 216 19 6 chr17 48982209 48982371 -40522182 - MER21B LTR ERV1 -687 176 13 2253 231 57 47 chr17 48982392 48982534 -40522019 - L1MEc LINE L1 -2437 3778 3639 1809 181 0 16 chr17 48982534 48982838 -40521715 - AluJo SINE Alu -13 299 1 2253 231 57 47 chr17 48982838 48983239 -40521314 - L1MEc LINE L1 -2576 3639 3244 2493 78 0 3 chr17 48983239 48983548 -40521005 - AluY SINE Alu -2 309 2 2253 231 57 47 chr17 48983548 48984014 -40520539 - L1MEc LINE L1 -2971 3244 2757 1212 107 0 0 chr17 48984023 48984182 -40520371 + AluSp SINE Alu 152 310 -3 869 258 63 62 chr17 48984182 48984656 -40519897 - L1MEc LINE L1 -3467 2748 2299 2250 110 7 7 chr17 48984656 48984957 -40519596 - AluSc SINE Alu -8 301 1 869 258 63 62 chr17 48984957 48985374 -40519179 - L1MEc LINE L1 -3916 2299 1884 1738 178 4 11 chr17 48985435 48985716 -40518837 - AluJo SINE Alu -13 299 21 192 167 0 0 chr17 48985725 48985773 -40518780 + (TA)n Simple_repeat Simple_repeat 2 49 0 457 120 67 0 chr17 48986379 48986454 -40518099 + FLAM_A SINE Alu 35 114 -28 23 0 0 0 chr17 48986454 48986477 -40518076 + AT_rich Low_complexity Low_complexity 1 23 0 496 299 70 21 chr17 48986513 48986623 -40517930 - MIR SINE MIR -2 260 136 2837 101 0 0 chr17 48986623 48986998 -40517555 + THE1C LTR MaLR 1 375 0 496 299 70 21 chr17 48986998 48987074 -40517479 - MIR SINE MIR -126 136 65 351 235 0 47 chr17 48987178 48987263 -40517290 - MIR3 SINE MIR -15 193 113 183 363 50 28 chr17 48987295 48987477 -40517076 + L2 LINE L2 2853 3038 -234 3410 152 18 25 chr17 48987519 48988085 -40516468 + MER68 LTR ERV1 1 562 0 3483 62 2 35 chr17 48988206 48988431 -40516122 - L1PB1 LINE L1 0 6151 5920 2301 116 0 0 chr17 48988431 48988741 -40515812 - AluSg SINE Alu 0 310 1 3483 62 2 35 chr17 48988741 48988995 -40515558 - L1PB1 LINE L1 -231 5920 5688 2716 173 70 0 chr17 48989024 48989522 -40515031 + MLT1F LTR MaLR 3 535 -7 335 286 45 0 chr17 48989699 48989898 -40514655 + L1ME3A LINE L1 5758 5965 -205 1879 106 0 0 chr17 48990368 48990605 -40513948 - AluSg/x SINE Alu -7 305 69 276 264 22 11 chr17 48991674 48991765 -40512788 + MER103 DNA DNA 3 94 -72 372 219 17 8 chr17 48991815 48991934 -40512619 + CT-rich Low_complexity Low_complexity 3 122 0 1090 145 0 0 chr17 48992314 48992473 -40512080 - AluJb SINE Alu -17 295 137 1856 110 0 58 chr17 48992777 48993069 -40511484 - AluJo SINE Alu -37 275 1 279 167 0 0 chr17 48994472 48994520 -40510033 + MLT1K LTR MaLR 138 185 -403 592 289 39 15 chr17 48994520 48994724 -40509829 + MIR SINE MIR 4 212 -50 304 367 78 0 chr17 48994879 48995007 -40509546 + L2 LINE L2 3134 3271 -1 834 130 0 8 chr17 48995439 48995562 -40508991 + FLAM_C SINE Alu 1 122 -21 2317 95 3 10 chr17 48996087 48996392 -40508161 - AluSx SINE Alu -9 303 1 24 32 0 0 chr17 48996409 48996440 -40508113 + AT_rich Low_complexity Low_complexity 1 31 0 190 363 12 25 chr17 48996484 48996564 -40507989 - MIR SINE MIR -164 98 20 1909 104 0 107 chr17 48996644 48997005 -40507548 + AluSx SINE Alu 1 327 0 1683 157 26 26 chr17 48997120 48997426 -40507127 + AluJb SINE Alu 1 306 -6 333 335 149 16 chr17 48997631 48998067 -40506486 - L2 LINE L2 -2502 812 319 1067 147 0 0 chr17 48998089 48998239 -40506314 - FRAM SINE Alu -19 157 8 735 139 114 0 chr17 48998260 48998418 -40506135 - L1MB7 LINE L1 -19 6165 5990 2188 138 0 6 chr17 48998424 48998736 -40505817 - AluSx SINE Alu -2 310 1 300 175 0 0 chr17 48998895 48998958 -40505595 + (TGGA)n Simple_repeat Simple_repeat 3 65 0 355 258 8 81 chr17 48999776 48999900 -40504653 - MIR3 SINE MIR -11 197 83 1837 157 41 0 chr17 48999908 49000202 -40504351 + AluJo SINE Alu 5 310 -2 719 191 14 7 chr17 49000308 49000455 -40504098 + L1MA10 LINE L1 6178 6325 -9 26 30 0 0 chr17 49000619 49000652 -40503901 + AT_rich Low_complexity Low_complexity 1 33 0 461 272 77 36 chr17 49001594 49001789 -40502764 + LTR33 LTR ERVL 12 214 -307 308 192 48 58 chr17 49001852 49001956 -40502597 + LTR33 LTR ERVL 361 463 -58 2248 127 0 10 chr17 49002446 49002760 -40501793 - AluSx SINE Alu -1 311 1 1431 166 112 8 chr17 49002764 49003023 -40501530 - AluJo SINE Alu -14 298 13 344 118 0 0 chr17 49003023 49003146 -40501407 + AluS SINE Alu 231 353 0 568 148 57 0 chr17 49003262 49003350 -40501203 + AluJ/FLAM SINE Alu 2 94 -218 350 248 28 0 chr17 49003354 49003463 -40501090 + L1ME2 LINE L1 6050 6161 -3 2033 103 21 18 chr17 49003525 49003830 -40500723 - AluSx SINE Alu 0 306 1 322 216 156 66 chr17 49003876 49004043 -40500510 + L2 LINE L2 2899 3080 -192 2290 87 23 16 chr17 49004519 49004828 -40499725 - AluSx SINE Alu -1 311 1 211 302 0 16 chr17 49005245 49005308 -40499245 - MIR3 SINE MIR -6 202 141 1968 143 31 0 chr17 49005747 49006034 -40498519 - AluSx SINE Alu -16 296 1 1147 151 0 0 chr17 49006245 49006424 -40498129 + L1MC1 LINE L1 6153 6331 -2 1738 141 72 24 chr17 49006434 49006724 -40497829 + AluJb SINE Alu 1 304 -8 398 294 62 52 chr17 49006914 49007108 -40497445 - MIR SINE MIR -14 248 53 230 46 0 123 chr17 49007206 49007271 -40497282 + (TCC)n Simple_repeat Simple_repeat 1 57 0 22 35 0 0 chr17 49007453 49007482 -40497071 + GC_rich Low_complexity Low_complexity 1 29 0 233 196 0 0 chr17 49008549 49008595 -40495958 + MER81 DNA DNA 55 100 -14 249 363 6 6 chr17 49009001 49009180 -40495373 + (CCCTA)n Simple_repeat Simple_repeat 2 180 0 * 385 236 0 92 chr17 49009060 49009255 -40495298 + C-rich Low_complexity Low_complexity 3 179 0 240 222 0 0 chr17 49009258 49009330 -40495223 + CT-rich Low_complexity Low_complexity 1 72 0 380 256 44 0 chr17 49010201 49010291 -40494262 - MIR SINE MIR -110 152 59 376 266 154 27 chr17 49010412 49010707 -40493846 - L2 LINE L2 -251 3021 2690 1973 128 3 42 chr17 49010711 49011017 -40493536 + AluSx SINE Alu 1 294 -18 249 195 293 73 chr17 49011647 49011770 -40492783 - L2 LINE L2 0 3313 3164 249 331 22 71 chr17 49012060 49012094 -40492459 - L2 LINE L2 -454 2860 2826 2100 109 36 17 chr17 49012094 49012396 -40492157 + AluSg SINE Alu 2 309 -1 249 331 22 71 chr17 49012396 49012545 -40492008 - L2 LINE L2 -488 2826 2686 333 236 209 36 chr17 49012557 49012667 -40491886 - MER5B DNA MER1_type -1 177 49 2096 142 3 0 chr17 49012689 49013000 -40491553 - AluSx SINE Alu 0 312 1 192 179 0 0 chr17 49013003 49013042 -40491511 + T-rich Low_complexity Low_complexity 1 39 0 672 236 0 0 chr17 49013047 49013174 -40491379 - FLAM_A SINE Alu -6 127 1 221 196 22 0 chr17 49013188 49013234 -40491319 - MER5B DNA MER1_type -124 54 8 905 160 43 37 chr17 49013235 49013423 -40491130 + MER20 DNA MER1_type 31 219 0 871 180 121 53 chr17 49013562 49013619 -40490934 + AluJo SINE Alu 86 138 -174 2047 121 3 38 chr17 49013619 49013933 -40490620 + AluSx SINE Alu 1 303 -9 871 180 121 53 chr17 49013933 49014081 -40490472 + AluJo SINE Alu 138 305 -7 2269 132 23 21 chr17 49014929 49015204 -40489349 - MLT1B LTR MaLR 0 390 117 2213 121 0 7 chr17 49015204 49015511 -40489042 - AluSg SINE Alu -5 305 1 1823 133 17 33 chr17 49015511 49015812 -40488741 - AluSx SINE Alu -14 298 3 2269 132 23 21 chr17 49015812 49015921 -40488632 - MLT1B LTR MaLR -272 118 4 2484 66 10 0 chr17 49016427 49016728 -40487825 + AluSc SINE Alu 1 304 -5 2120 113 36 3 chr17 49016732 49017034 -40487519 + AluSx SINE Alu 1 312 0 2323 119 0 0 chr17 49017707 49018010 -40486543 - AluSx SINE Alu -9 303 1 3626 158 22 11 chr17 49018029 49018675 -40485878 - L1MB1 LINE L1 -1 6167 5515 694 212 0 0 chr17 49018853 49018966 -40485587 - FLAM_A SINE Alu -29 113 1 334 287 49 76 chr17 49018987 49019072 -40485481 - MIR SINE MIR -27 235 149 186 0 40 0 chr17 49019072 49019097 -40485456 + (TTTTG)n Simple_repeat Simple_repeat 2 135 0 1875 125 0 40 chr17 49019097 49019393 -40485160 - AluSx SINE Alu -1 308 1 334 287 49 76 chr17 49019393 49019529 -40485024 - MIR SINE MIR -111 151 19 363 262 32 23 chr17 49019863 49020000 -40484553 - MIR SINE MIR 0 208 75 2238 102 3 0 chr17 49020459 49020763 -40483790 + AluSq SINE Alu 1 305 -8 1281 253 86 25 chr17 49021367 49021421 -40483132 - L1MB1 LINE L1 -871 5275 5226 2120 97 0 40 chr17 49021421 49021455 -40483098 - AluSc SINE Alu -1 308 274 198 0 0 0 chr17 49021455 49021477 -40483076 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 2120 97 0 40 chr17 49021477 49021763 -40482790 - AluSc SINE Alu -35 274 1 1281 253 86 25 chr17 49021763 49022349 -40482204 - L1MB1 LINE L1 -920 5226 4596 306 215 55 75 chr17 49022354 49022573 -40481980 - L1MDb LINE L1 -4931 1475 1253 2222 107 0 3 chr17 49023646 49023954 -40480599 - AluSg SINE Alu -3 307 1 2086 101 14 0 chr17 49025149 49025446 -40479107 - AluSc SINE Alu -8 301 1 318 26 0 0 chr17 49026026 49026065 -40478488 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr17 49026268 49026297 -40478256 + AT_rich Low_complexity Low_complexity 1 29 0 1906 73 4 0 chr17 49026775 49027022 -40477531 - AluSc SINE Alu -1 308 61 704 317 148 5 chr17 49027270 49027690 -40476863 - MLT1G1 LTR MaLR -7 588 109 594 242 0 0 chr17 49028069 49028302 -40476251 + (CCCA)n Simple_repeat Simple_repeat 1 233 0 200 339 0 0 chr17 49028303 49028362 -40476191 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 468 123 0 0 chr17 49028362 49028435 -40476118 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 464 280 71 6 chr17 49029044 49029205 -40475348 - MIR SINE MIR -64 144 21 1229 115 96 10 chr17 49029724 49029933 -40474620 - AluSg/x SINE Alu -1 309 83 1261 148 44 0 chr17 49029970 49030173 -40474380 - AluSg/x SINE Alu -8 304 93 337 341 40 8 chr17 49030601 49030727 -40473826 + MIR SINE MIR 63 192 -70 278 49 0 24 chr17 49030843 49030884 -40473669 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 365 227 236 0 chr17 49032033 49032143 -40472410 - L3 LINE CR1 -546 1031 896 569 291 0 0 chr17 49032555 49032682 -40471871 + MIR SINE MIR 22 148 -114 597 227 0 0 chr17 49032996 49033168 -40471385 + (CA)n Simple_repeat Simple_repeat 1 172 0 358 268 123 57 chr17 49033689 49034006 -40470547 - L2 LINE L2 -124 3148 2811 272 265 59 0 chr17 49035165 49035233 -40469320 + MIR SINE MIR 74 145 -63 251 209 30 45 chr17 49035339 49035406 -40469147 - L2 LINE L2 -193 3079 3014 1020 184 0 0 chr17 49035614 49035788 -40468765 - AluSx SINE Alu -126 186 13 589 282 46 0 chr17 49035846 49036041 -40468512 - HAL1 LINE L1 -849 1658 1455 329 229 167 10 chr17 49036161 49036257 -40468296 + L2 LINE L2 3203 3313 0 696 161 0 0 chr17 49036305 49036417 -40468136 - AluJo/FRAM SINE Alu -1 311 200 859 200 0 0 chr17 49036417 49036572 -40467981 - AluJo SINE Alu -73 239 85 2087 112 14 0 chr17 49036575 49036870 -40467683 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 49036941 49036969 -40467584 + AT_rich Low_complexity Low_complexity 1 28 0 2252 78 0 3 chr17 49037018 49037325 -40467228 - AluY SINE Alu -5 306 1 1666 158 3 23 chr17 49037329 49037632 -40466921 - AluJo SINE Alu -15 297 1 315 284 19 8 chr17 49037722 49037747 -40466806 - L1ME LINE L1 -477 5644 5621 2114 114 3 0 chr17 49037747 49038045 -40466508 + AluSx SINE Alu 1 299 -13 315 284 19 8 chr17 49038045 49038129 -40466424 - L1ME LINE L1 -500 5621 5534 7436 74 8 1 chr17 49038526 49039488 -40465065 - LTR5 LTR ERVK 0 969 1 410 258 72 30 chr17 49039608 49039775 -40464778 - MER113 DNA MER1_type? -10 511 338 1671 142 21 18 chr17 49039788 49040070 -40464483 - AluJo SINE Alu -23 289 7 2133 113 0 3 chr17 49040133 49040443 -40464110 - AluSg SINE Alu -1 309 1 348 234 82 25 chr17 49040487 49040645 -40463908 - MER113 DNA MER1_type? -344 177 11 837 174 47 0 chr17 49043067 49043223 -40461330 - AluJb SINE Alu -12 300 134 1749 162 44 0 chr17 49043223 49043520 -40461033 - AluSx SINE Alu -2 310 1 837 174 47 0 chr17 49043520 49043535 -40461018 - AluJb SINE Alu -178 134 121 513 57 143 0 chr17 49043547 49043617 -40460936 - MER41B LTR ERV1 -385 250 171 1786 160 13 3 chr17 49043619 49043919 -40460634 - AluSx SINE Alu -9 303 1 1337 220 45 7 chr17 49044103 49044389 -40460164 - AluJb SINE Alu -5 297 1 21 0 0 0 chr17 49044414 49044435 -40460118 + AT_rich Low_complexity Low_complexity 1 21 0 660 95 0 0 chr17 49044439 49044523 -40460030 - AluSq/x SINE Alu -194 118 35 27 0 0 0 chr17 49044995 49045022 -40459531 + AT_rich Low_complexity Low_complexity 1 27 0 1227 131 0 6 chr17 49045211 49045394 -40459159 - AluY SINE Alu -129 182 1 2508 191 42 65 chr17 49045440 49046089 -40458464 - LTR8A LTR ERV1 0 727 94 460 133 53 13 chr17 49046189 49046264 -40458289 - MER20 DNA MER1_type -134 85 8 1498 134 91 4 chr17 49047670 49047957 -40456596 + AluSg SINE Alu 8 316 0 437 256 24 0 chr17 49047962 49048087 -40456466 - L1ME4a LINE L1 -253 5868 5741 502 285 82 0 chr17 49048743 49048901 -40455652 + MIR SINE MIR 92 262 0 221 264 99 11 chr17 49048880 49048971 -40455582 + L2 LINE L2 3214 3312 -1 * 1815 135 35 0 chr17 49049394 49049676 -40454877 - AluJo SINE Alu -20 292 1 1480 164 82 0 chr17 49049788 49050095 -40454458 + AluJb SINE Alu 1 312 0 2230 113 0 0 chr17 49050234 49050535 -40454018 + AluSx SINE Alu 1 301 -11 303 245 32 11 chr17 49050649 49050743 -40453810 + L3b LINE CR1 1324 1419 -164 1606 194 39 22 chr17 49051318 49051673 -40452880 - L1MB7 LINE L1 0 6184 5824 2210 92 7 3 chr17 49051679 49051985 -40452568 - AluSx SINE Alu -5 307 1 240 35 0 0 chr17 49052125 49052154 -40452399 + (TG)n Simple_repeat Simple_repeat 2 30 0 3109 78 20 24 chr17 49053115 49053565 -40450988 + LTR7 LTR ERV1 1 448 -2 218 401 12 12 chr17 49054156 49054318 -40450235 + MER5A DNA MER1_type 28 189 0 330 341 57 0 chr17 49055282 49055405 -40449148 + L2 LINE L2 3143 3272 0 809 239 0 0 chr17 49055502 49055698 -40448855 - AluJb SINE Alu 0 316 121 359 320 44 17 chr17 49055805 49055986 -40448567 - MIR SINE MIR -51 211 26 2069 130 3 0 chr17 49055993 49056300 -40448253 - AluSx SINE Alu -4 308 1 322 140 0 0 chr17 49057573 49057623 -40446930 - MER115 DNA AcHobo 0 693 644 2284 98 0 0 chr17 49058361 49058668 -40445885 - AluSq SINE Alu -6 307 1 434 279 73 69 chr17 49059011 49059244 -40445309 + MIR SINE MIR 29 262 0 189 0 0 0 chr17 49059712 49059733 -40444820 + (T)n Simple_repeat Simple_repeat 1 21 0 260 371 17 0 chr17 49060979 49061154 -40443399 + (CCA)n Simple_repeat Simple_repeat 1 178 0 191 306 0 0 chr17 49061154 49061203 -40443350 - L2 LINE L2 -11 3261 3213 2017 112 0 0 chr17 49061211 49061489 -40443064 - AluSg SINE Alu -3 307 30 293 242 20 30 chr17 49061861 49061960 -40442593 + LTR67 LTR ERVL 460 557 0 697 188 100 44 chr17 49062596 49062657 -40441896 - MER58B DNA MER1_type -2079 341 285 2101 98 0 0 chr17 49062657 49062934 -40441619 - AluSx SINE Alu -35 277 1 697 188 100 44 chr17 49062934 49063032 -40441521 - MER58B DNA MER1_type -2135 285 173 2175 79 4 0 chr17 49063042 49063349 -40441204 - AluY SINE Alu 0 308 1 1893 120 7 20 chr17 49064129 49064430 -40440123 + AluJo SINE Alu 1 297 -15 826 270 69 56 chr17 49064437 49065092 -40439461 + L2 LINE L2 2643 3313 0 212 381 113 15 chr17 49065206 49065471 -40439082 - L2 LINE L2 -850 2464 2174 24 32 0 0 chr17 49065524 49065555 -40438998 + AT_rich Low_complexity Low_complexity 1 31 0 1936 133 3 0 chr17 49065600 49065885 -40438668 - AluSx SINE Alu -15 297 12 2109 119 0 3 chr17 49066059 49066370 -40438183 - AluSg SINE Alu 0 310 1 189 164 0 148 chr17 49066893 49066954 -40437599 - L2 LINE L2 -24 3248 3197 534 295 3 0 chr17 49067506 49067858 -40436695 + (TG)n Simple_repeat Simple_repeat 1 353 0 1993 133 52 33 chr17 49067863 49068231 -40436322 - THE1C LTR MaLR 0 375 1 426 229 0 0 chr17 49068232 49068440 -40436113 + (TG)n Simple_repeat Simple_repeat 1 208 0 301 277 0 88 chr17 49068661 49068798 -40435755 + L2 LINE L2 3138 3262 -10 520 178 47 84 chr17 49068944 49069135 -40435418 + MER53 DNA DNA 2 185 -4 329 286 65 37 chr17 49069494 49069696 -40434857 - MIR SINE MIR -51 211 2 751 168 12 0 chr17 49069836 49070003 -40434550 + (TCCA)n Simple_repeat Simple_repeat 2 170 0 568 184 14 0 chr17 49070022 49070169 -40434384 + (TCCA)n Simple_repeat Simple_repeat 3 151 0 668 128 10 87 chr17 49070204 49070399 -40434154 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 352 222 19 0 chr17 49070457 49070565 -40433988 + (TCCA)n Simple_repeat Simple_repeat 2 111 0 231 190 0 0 chr17 49070603 49070661 -40433892 + (TCCA)n Simple_repeat Simple_repeat 3 60 0 213 186 200 29 chr17 49070662 49070732 -40433821 - L2 LINE L2 -47 3225 3144 767 148 26 148 chr17 49071587 49071615 -40432938 - MER20 DNA MER1_type -17 202 172 1985 146 0 17 chr17 49071615 49071953 -40432600 - AluJo SINE Alu 0 312 1 767 148 26 148 chr17 49071953 49072154 -40432399 - MER20 DNA MER1_type -47 172 1 423 0 0 0 chr17 49072784 49072831 -40431722 + (TG)n Simple_repeat Simple_repeat 2 48 0 200 204 0 0 chr17 49073115 49073159 -40431394 + CT-rich Low_complexity Low_complexity 1 44 0 2256 115 3 6 chr17 49073485 49073798 -40430755 - AluSx SINE Alu 0 312 1 5174 89 34 0 chr17 49073806 49074538 -40430015 - L1PA15 LINE L1 -4 6161 5405 472 306 85 20 chr17 49074859 49075058 -40429495 + MIR SINE MIR 51 262 0 480 339 26 26 chr17 49075447 49075674 -40428879 - MIR SINE MIR -8 254 28 198 306 32 0 chr17 49075774 49075836 -40428717 - MIR SINE MIR -122 140 77 674 233 37 25 chr17 49075930 49076093 -40428460 + MER45A DNA AcHobo 1 165 -13 564 77 0 0 chr17 49076210 49076288 -40428265 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 1835 167 7 10 chr17 49076288 49076571 -40427982 - AluSx SINE Alu -28 284 1 1093 101 0 0 chr17 49076607 49076745 -40427808 - AluJb SINE Alu -174 138 1 517 148 10 10 chr17 49077425 49077526 -40427027 + MER53 DNA DNA 9 109 -80 415 307 212 6 chr17 49077622 49077801 -40426752 - MIR SINE MIR -27 235 20 310 290 226 0 chr17 49077802 49077957 -40426596 - HAL1 LINE L1 -1216 1291 1102 249 33 0 0 chr17 49077972 49078002 -40426551 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 910 168 0 7 chr17 49078026 49078175 -40426378 - FRAM SINE Alu -20 156 9 1689 118 48 69 chr17 49079311 49079651 -40424902 - AluSx SINE Alu 0 334 1 323 310 69 29 chr17 49079820 49079994 -40424559 + MIR SINE MIR 48 228 -34 380 290 134 27 chr17 49080163 49080349 -40424204 - L2 LINE L2 -6 3307 3102 2169 101 4 0 chr17 49080693 49081006 -40423547 + AluSc SINE Alu 1 314 0 2110 152 0 7 chr17 49081583 49081892 -40422661 - AluJo SINE Alu -5 307 1 195 42 0 0 chr17 49082466 49082490 -40422063 + (CTGGGG)n Simple_repeat Simple_repeat 3 26 0 1838 112 9 118 chr17 49084405 49084744 -40419809 + AluSx SINE Alu 1 302 -10 1186 79 17 6 chr17 49085051 49085228 -40419325 - L1MA5A LINE L1 -3 6294 6116 738 135 88 78 chr17 49085228 49085309 -40419244 + L1MA5A LINE L1 5964 6043 -254 1776 168 7 7 chr17 49085309 49085606 -40418947 + AluJb SINE Alu 1 297 -15 738 135 88 78 chr17 49085606 49085717 -40418836 + L1MA5A LINE L1 6043 6158 -139 1933 119 66 33 chr17 49085960 49086262 -40418291 + AluJb SINE Alu 1 312 0 882 173 208 0 chr17 49086657 49086883 -40417670 - L1MB7 LINE L1 0 6184 5912 1673 163 10 0 chr17 49087128 49087434 -40417119 - L1MB7 LINE L1 -272 5906 5598 208 313 0 12 chr17 49087698 49087778 -40416775 + GA-rich Low_complexity Low_complexity 3 81 0 240 167 0 0 chr17 49088426 49088474 -40416079 + (TA)n Simple_repeat Simple_repeat 2 49 0 731 167 0 7 chr17 49088479 49088623 -40415930 - L1PB1 LINE L1 -81 6070 5928 345 347 20 40 chr17 49088646 49088814 -40415739 - MER5B DNA MER1_type -1 188 12 1016 177 28 0 chr17 49088834 49089015 -40415538 + MER5A DNA MER1_type 4 189 0 550 283 91 5 chr17 49089020 49089207 -40415346 + MIR SINE MIR 58 260 -2 2177 128 0 3 chr17 49090635 49090948 -40413605 - AluSx SINE Alu 0 312 1 414 290 90 14 chr17 49090974 49091119 -40413434 - MER5B DNA MER1_type -19 159 4 2360 105 0 0 chr17 49091237 49091533 -40413020 - AluSx SINE Alu -16 296 1 532 148 0 4 chr17 49091649 49091759 -40412794 - L1M4 LINE L1 -410 5768 5662 239 146 0 0 chr17 49091761 49091802 -40412751 - L1MB3 LINE L1 -11 6172 6132 2289 83 0 3 chr17 49091802 49092092 -40412461 - AluSg SINE Alu -21 289 1 533 218 24 0 chr17 49092094 49092218 -40412335 - L1MB3 LINE L1 -354 5829 5703 994 113 51 26 chr17 49092461 49092656 -40411897 + Tigger2 DNA MER2_type 1 200 -2518 551 174 149 37 chr17 49092635 49092796 -40411757 + Tigger2 DNA MER2_type 2530 2708 -10 * 255 31 0 0 chr17 49092862 49092894 -40411659 + (CA)n Simple_repeat Simple_repeat 2 33 0 333 0 0 0 chr17 49094170 49094207 -40410346 + (TG)n Simple_repeat Simple_repeat 1 37 0 309 26 0 0 chr17 49094206 49094244 -40410309 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 824 189 0 0 chr17 49096189 49096321 -40408232 + FLAM_C SINE Alu 2 133 0 222 254 201 36 chr17 49096506 49096704 -40407849 - MIR SINE MIR 0 262 16 243 202 39 79 chr17 49097271 49097449 -40407104 + (ATATG)n Simple_repeat Simple_repeat 5 175 0 303 225 66 0 chr17 49097509 49097660 -40406893 + (TTATA)n Simple_repeat Simple_repeat 5 165 0 200 242 60 27 chr17 49097693 49097842 -40406711 + (ATATG)n Simple_repeat Simple_repeat 2 155 0 2197 106 3 0 chr17 49098174 49098484 -40406069 + AluSg SINE Alu 1 311 0 256 175 0 0 chr17 49099116 49099156 -40405397 - MER5A DNA MER1_type -2 187 148 803 125 0 0 chr17 49099169 49099289 -40405264 - HERVK3 LTR ERVK -2439 4804 4685 * 1083 50 14 0 chr17 49099288 49099427 -40405126 - HERVK3 LTR ERVK -2936 4307 4167 421 134 216 0 chr17 49099445 49099542 -40405011 - MER5A DNA MER1_type -71 118 1 1964 132 7 7 chr17 49101572 49101852 -40402701 + AluSx SINE Alu 1 280 -32 188 340 82 21 chr17 49102011 49102108 -40402445 - L3b LINE CR1 -185 1398 1296 378 169 242 48 chr17 49103506 49103630 -40400923 - L2 LINE L2 0 3313 3166 928 241 113 62 chr17 49103699 49104035 -40400518 - MLT1H LTR MaLR -147 402 50 334 311 64 32 chr17 49104211 49104437 -40400116 - L2 LINE L2 -266 3006 2777 206 217 152 0 chr17 49104633 49104679 -40399874 + L2 LINE L2 3149 3201 -71 326 60 0 20 chr17 49104719 49104769 -40399784 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 414 253 118 1 chr17 49104769 49104908 -40399645 + MIR SINE MIR 20 177 -31 264 217 0 0 chr17 49105274 49105366 -40399187 + (TGG)n Simple_repeat Simple_repeat 1 92 0 1944 169 0 3 chr17 49105727 49106040 -40398513 - AluJb SINE Alu 0 312 1 266 297 59 30 chr17 49106041 49106142 -40398411 - L2 LINE L2 -13 3300 3197 412 275 225 0 chr17 49106392 49106552 -40398001 - MER91A DNA MER1_type 0 196 1 184 298 44 122 chr17 49106663 49106844 -40397709 + L2 LINE L2 3057 3223 -49 1604 97 43 127 chr17 49107234 49107628 -40396925 - AluSq SINE Alu 0 385 17 359 184 126 23 chr17 49107728 49107815 -40396738 - AluSc SINE Alu -18 281 186 1726 86 0 5 chr17 49107815 49108035 -40396518 - AluSq SINE Alu -94 219 1 1956 102 4 0 chr17 49108532 49108788 -40395765 + AluSc SINE Alu 1 257 -52 213 348 148 22 chr17 49108915 49109145 -40395408 - L2 LINE L2 -49 3264 3006 249 192 128 0 chr17 49109340 49109418 -40395135 + MLT1J2 LTR MaLR 49 136 -314 222 159 43 0 chr17 49110815 49110884 -40393669 + CT-rich Low_complexity Low_complexity 2 73 0 414 287 104 0 chr17 49110988 49111103 -40393450 - L2 LINE L2 -7 3265 3139 736 166 11 17 chr17 49111714 49111895 -40392658 + (CAT)n Simple_repeat Simple_repeat 1 180 0 290 169 15 0 chr17 49111899 49111964 -40392589 + (CACCAT)n Simple_repeat Simple_repeat 5 70 0 211 257 88 35 chr17 49113152 49113265 -40391288 + MIR SINE MIR 86 204 -58 231 83 28 0 chr17 49113387 49113423 -40391130 - MLT1E2 LTR MaLR -4 620 584 1505 217 23 14 chr17 49113472 49113817 -40390736 - MLT1A1 LTR MaLR -10 355 8 1362 212 89 38 chr17 49113793 49114184 -40390369 - MLT1E2 LTR MaLR -80 546 136 * 252 325 77 8 chr17 49114308 49114425 -40390128 + MIR3 SINE MIR 52 176 -32 342 254 21 12 chr17 49114639 49114764 -40389789 - MER5A DNA MER1_type -49 129 15 405 309 74 0 chr17 49114788 49114937 -40389616 + MIR SINE MIR 24 183 -79 2267 102 0 20 chr17 49115593 49115897 -40388656 - AluSx SINE Alu -14 298 1 2170 133 0 16 chr17 49118439 49118754 -40385799 - AluSx SINE Alu -1 311 2 287 59 0 0 chr17 49118953 49118987 -40385566 - tRNA-Cys-TGC tRNA tRNA -38 37 4 442 264 69 69 chr17 49119787 49120033 -40384520 - LTR16B LTR ERVL 0 464 219 825 235 37 8 chr17 49120079 49120322 -40384231 - LTR16B LTR ERVL -203 261 12 394 260 87 0 chr17 49120396 49120500 -40384053 - L2 LINE L2 -2 3311 3199 963 204 23 27 chr17 49120507 49120727 -40383826 + MER20 DNA MER1_type 1 219 0 365 225 179 20 chr17 49121907 49122058 -40382495 + MER5B DNA MER1_type 4 178 0 637 295 20 16 chr17 49122123 49122367 -40382186 - MLT1J LTR MaLR -266 245 1 321 26 0 0 chr17 49122406 49122444 -40382109 + (CATAA)n Simple_repeat Simple_repeat 3 40 0 234 271 0 0 chr17 49122751 49122810 -40381743 + MIR SINE MIR 118 176 -86 1796 151 49 25 chr17 49123315 49123680 -40380873 + THE1C LTR MaLR 1 374 -1 1908 142 31 7 chr17 49124360 49124648 -40379905 - AluJo SINE Alu -17 295 1 2289 126 0 0 chr17 49125760 49126070 -40378483 + AluSx SINE Alu 1 310 -2 448 219 25 17 chr17 49126257 49126376 -40378177 - MER58C DNA MER1_type -14 201 82 1154 98 4 142 chr17 49126407 49126488 -40378065 + L1MB3 LINE L1 5258 5349 -831 1993 146 3 0 chr17 49126488 49126776 -40377777 + AluSx SINE Alu 4 292 -20 1154 98 4 142 chr17 49126776 49126971 -40377582 + L1MB3 LINE L1 5349 5494 -686 2454 105 18 26 chr17 49127073 49127194 -40377359 + L1MB3 LINE L1 5796 5916 -267 4250 122 9 6 chr17 49127194 49127827 -40376726 + MER41B LTR ERV1 1 635 0 2454 105 18 26 chr17 49127827 49128096 -40376457 + L1MB3 LINE L1 5916 6183 0 264 293 79 70 chr17 49128310 49128602 -40375951 - L1MDa LINE L1 -749 2152 1864 7867 89 7 15 chr17 49128602 49129682 -40374871 + MER11C LTR ERVK 1 1071 0 264 293 79 70 chr17 49129682 49129928 -40374625 - L1MDa LINE L1 -1037 1864 1544 228 232 11 32 chr17 49130222 49130317 -40374236 + (TA)n Simple_repeat Simple_repeat 2 94 0 792 169 0 0 chr17 49130575 49130729 -40373824 + (TCCA)n Simple_repeat Simple_repeat 3 156 0 598 316 13 17 chr17 49131418 49131655 -40372898 + MIR SINE MIR 17 252 -10 2045 141 165 5 chr17 49132036 49132405 -40372148 + MSTA LTR MaLR 1 428 0 2385 82 0 3 chr17 49133068 49133361 -40371192 + AluSg SINE Alu 1 292 -18 1235 236 38 18 chr17 49133390 49133729 -40370824 + MLT1C LTR MaLR 120 465 -2 366 289 80 64 chr17 49133738 49133874 -40370679 - L1ME LINE L1 -336 5785 5644 1884 157 9 28 chr17 49133874 49134192 -40370361 + AluJo SINE Alu 1 312 0 366 289 80 64 chr17 49134192 49134242 -40370311 - L1ME LINE L1 -477 5644 5596 966 98 0 15 chr17 49134284 49134416 -40370137 - FLAM_C SINE Alu -13 130 1 1623 189 10 17 chr17 49134839 49135136 -40369417 - AluJo SINE Alu -17 295 1 2231 100 4 0 chr17 49135144 49135455 -40369098 - AluSx SINE Alu 0 316 5 2445 85 0 19 chr17 49136462 49136780 -40367773 + AluSx SINE Alu 1 312 0 222 272 33 11 chr17 49137080 49137172 -40367381 - L2 LINE L2 -557 2757 2664 1904 140 28 130 chr17 49137361 49137624 -40366929 - MSTB LTR MaLR -3 414 229 2073 149 13 0 chr17 49137624 49137932 -40366621 - AluSx SINE Alu 0 312 1 1904 140 28 130 chr17 49137932 49138140 -40366413 - MSTB LTR MaLR -188 229 1 1620 164 59 3 chr17 49138619 49138905 -40365648 + AluJb SINE Alu 9 310 -2 2905 166 21 10 chr17 49139069 49139588 -40364965 + L1MB7 LINE L1 5606 6130 -54 685 225 117 62 chr17 49139787 49139981 -40364572 - ORSL DNA AcHobo -22 253 42 1873 159 3 10 chr17 49139981 49140277 -40364276 + AluJb SINE Alu 1 294 -18 685 225 117 62 chr17 49140277 49140322 -40364231 - ORSL DNA AcHobo -233 42 1 1156 150 19 19 chr17 49140512 49140719 -40363834 + Tigger2 DNA MER2_type 4 210 -2508 846 175 13 7 chr17 49140718 49140872 -40363681 + Tigger2 DNA MER2_type 2564 2718 0 * 245 333 75 0 chr17 49141098 49141191 -40363362 - MER91A DNA MER1_type -4 192 93 242 298 231 0 chr17 49141199 49141303 -40363250 - MER91A DNA MER1_type -26 170 43 2044 143 13 19 chr17 49141481 49141795 -40362758 - AluSx SINE Alu 0 312 1 318 87 0 0 chr17 49141951 49141997 -40362556 + (CA)n Simple_repeat Simple_repeat 2 47 0 1288 157 5 0 chr17 49142039 49142249 -40362304 - MLT1B LTR MaLR -1 389 179 2698 282 101 16 chr17 49142256 49143591 -40360962 - L2 LINE L2 -632 2682 1234 2276 145 11 26 chr17 49143939 49144319 -40360234 + THE1C LTR MaLR 2 375 0 2259 113 0 0 chr17 49144413 49144706 -40359847 - AluSq SINE Alu -20 293 1 423 309 111 23 chr17 49145626 49145843 -40358710 + Charlie8 DNA MER1_type 5 240 -2177 620 272 15 24 chr17 49146050 49146256 -40358297 - LTR16A1 LTR ERVL -2 455 252 634 264 104 57 chr17 49146700 49146888 -40357665 - L1ME4a LINE L1 -7 6114 5936 2156 126 7 0 chr17 49146897 49147190 -40357363 + AluSx SINE Alu 1 295 -17 350 204 10 31 chr17 49147190 49147278 -40357275 - L1MC2 LINE L1 -10 6334 6247 634 264 104 57 chr17 49147278 49147303 -40357250 - L1ME4a LINE L1 -185 5936 5914 283 43 22 22 chr17 49147303 49147349 -40357204 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 634 264 104 57 chr17 49147349 49147713 -40356840 - L1ME4a LINE L1 -207 5914 5509 2088 134 42 31 chr17 49147804 49148163 -40356390 + THE1B LTR MaLR 1 363 -1 277 356 75 13 chr17 49148193 49148432 -40356121 + L2 LINE L2 2549 2802 -512 2230 125 7 0 chr17 49148601 49148905 -40355648 - AluSx SINE Alu -6 306 1 224 290 0 16 chr17 49148928 49148990 -40355563 + L2 LINE L2 2995 3055 -217 1737 162 0 61 chr17 49149519 49149815 -40354738 + AluJb SINE Alu 7 284 -28 213 39 0 0 chr17 49149818 49149844 -40354709 + (GAAAA)n Simple_repeat Simple_repeat 3 28 0 546 313 87 26 chr17 49150180 49150525 -40354028 + LTR16C LTR ERVL 93 458 -33 1607 54 0 50 chr17 49150526 49150596 -40353957 + L1MA1 LINE L1 6088 6160 -142 2226 105 3 20 chr17 49150596 49150900 -40353653 + AluSg SINE Alu 1 299 -11 1607 54 0 50 chr17 49150900 49151051 -40353502 + L1MA1 LINE L1 6160 6298 -4 699 189 8 0 chr17 49151148 49151280 -40353273 - FLAM_A SINE Alu 0 133 1 672 13 0 0 chr17 49151347 49151424 -40353129 + (TTCCC)n Simple_repeat Simple_repeat 4 80 0 201 167 0 0 chr17 49151899 49151935 -40352618 + A-rich Low_complexity Low_complexity 1 36 0 1130 225 109 46 chr17 49152902 49153316 -40351237 - LTR16A1 LTR ERVL -2 455 16 230 235 0 0 chr17 49153495 49153546 -40351007 - MIR SINE MIR -51 211 161 349 305 96 10 chr17 49153604 49153801 -40350752 + L1ME4a LINE L1 5694 5907 -214 456 67 0 0 chr17 49153803 49153863 -40350690 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 188 174 72 chr17 49154291 49154429 -40350124 + L1ME4a LINE L1 5968 6119 -2 4062 113 60 8 chr17 49154745 49155363 -40349190 + L1PA16 LINE L1 5517 6166 0 561 265 67 16 chr17 49155408 49155639 -40348914 - MIR SINE MIR 0 262 15 1820 182 0 0 chr17 49155963 49156260 -40348293 - AluJb SINE Alu -14 298 2 565 238 66 17 chr17 49156282 49156463 -40348090 - L1ME3A LINE L1 -8 6162 5973 790 266 144 22 chr17 49156670 49156990 -40347563 - L1ME3A LINE L1 -477 5685 5327 2437 156 34 7 chr17 49157792 49158209 -40346344 + MSTB1 LTR MaLR 1 428 -4 5524 152 47 11 chr17 49158358 49160180 -40344373 - L1MA8 LINE L1 -1 6290 4408 1219 268 25 55 chr17 49160352 49160789 -40343764 + MLT1K LTR MaLR 162 585 -3 1192 230 43 55 chr17 49161055 49161499 -40343054 - MLT1A1 LTR MaLR 0 365 1 216 67 0 0 chr17 49161549 49161579 -40342974 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 211 342 0 13 chr17 49161740 49161816 -40342737 + MIR3 SINE MIR 126 200 -8 2233 102 3 0 chr17 49161829 49162122 -40342431 + AluSc SINE Alu 1 294 -15 210 356 0 23 chr17 49162143 49162230 -40342323 - MIR3 SINE MIR -36 172 88 2335 92 3 28 chr17 49163860 49164177 -40340376 + AluSp SINE Alu 1 309 -4 2006 108 4 0 chr17 49164190 49164448 -40340105 + AluSx SINE Alu 1 259 -53 4475 112 21 41 chr17 49164773 49165478 -40339075 + LTR8 LTR ERV1 1 691 0 304 141 197 0 chr17 49165586 49165657 -40338896 - MIR3 SINE MIR -9 199 115 2360 91 0 0 chr17 49165775 49166072 -40338481 + AluSx SINE Alu 1 297 -15 3376 177 60 45 chr17 49166438 49167533 -40337020 + L1MB7 LINE L1 4598 5675 -509 2284 107 3 0 chr17 49167533 49167832 -40336721 - AluSc SINE Alu -9 300 1 3376 177 60 45 chr17 49167832 49167845 -40336708 + L1MB7 LINE L1 5675 5686 -498 2503 65 0 3 chr17 49167845 49168151 -40336402 - AluY SINE Alu -6 305 1 3376 177 60 45 chr17 49168151 49168549 -40336004 + L1MB7 LINE L1 5686 6160 -24 404 313 22 22 chr17 49168805 49168956 -40335597 + MIR SINE MIR 9 154 -54 246 299 41 0 chr17 49170866 49170963 -40333590 - MIR SINE MIR -102 160 60 2300 77 0 0 chr17 49171090 49171387 -40333166 + AluY SINE Alu 1 297 -14 1984 138 3 0 chr17 49171800 49172104 -40332449 + AluSq SINE Alu 1 305 -8 772 115 9 0 chr17 49172168 49172281 -40332272 - L1MB3 LINE L1 -7 6176 6063 1208 127 49 114 chr17 49172399 49172450 -40332103 - L1MB3 LINE L1 -128 6055 6002 1957 133 0 0 chr17 49172450 49172765 -40331788 + AluSx SINE Alu 2 316 0 1208 127 49 114 chr17 49172765 49173018 -40331535 - L1MB3 LINE L1 -181 6002 5769 1067 212 5 36 chr17 49173116 49173338 -40331215 - MER58A DNA MER1_type -9 215 1 2062 130 49 33 chr17 49173662 49174030 -40330523 + THE1C LTR MaLR 1 374 -1 1536 250 42 14 chr17 49174444 49174872 -40329681 - L1ME1 LINE L1 -6 6160 5721 1030 238 19 0 chr17 49174863 49175128 -40329425 - L1M4 LINE L1 -3500 2646 2377 * 399 280 48 48 chr17 49175938 49176106 -40328447 - MIR SINE MIR -34 228 61 1269 187 23 12 chr17 49176153 49176410 -40328143 - MLT1C LTR MaLR 0 467 208 2057 100 0 17 chr17 49176444 49176743 -40327810 + AluSg SINE Alu 1 294 -16 5430 100 20 15 chr17 49176743 49177546 -40327007 - L1PA13 LINE L1 -10 6153 5347 541 274 98 6 chr17 49177628 49177792 -40326761 + MIR SINE MIR 80 258 -4 469 274 132 44 chr17 49177813 49178201 -40326352 + L2 LINE L2 2748 3155 -158 232 224 0 30 chr17 49178204 49178271 -40326282 - L1MC4 LINE L1 -1339 6703 6639 369 238 119 0 chr17 49178271 49178372 -40326181 + L2 LINE L2 3189 3301 -12 225 0 0 0 chr17 49178374 49178399 -40326154 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 541 242 16 23 chr17 49178628 49178756 -40325797 - MIR SINE MIR -122 140 14 1977 199 75 16 chr17 49179880 49180326 -40324227 + MLT1C LTR MaLR 6 396 0 299 176 0 209 chr17 49181264 49181288 -40323265 - MER103 DNA DNA -7 159 132 1869 75 12 8 chr17 49181288 49181566 -40322987 + AluY SINE Alu 31 309 0 299 176 0 209 chr17 49181566 49181688 -40322865 - MER103 DNA DNA -34 132 43 1172 237 16 4 chr17 49181695 49181940 -40322613 - MIR SINE MIR -10 252 5 375 266 0 0 chr17 49182454 49182533 -40322020 + MER91B DNA MER1_type 5 83 -107 1120 183 5 5 chr17 49182811 49183013 -40321540 - MER20 DNA MER1_type -14 205 4 1188 199 50 50 chr17 49183033 49183070 -40321483 + MER33 DNA MER1_type 3 39 -2546 1979 112 20 33 chr17 49183070 49183375 -40321178 - AluSx SINE Alu -11 301 1 1188 199 50 50 chr17 49183375 49183659 -40320894 + MER33 DNA MER1_type 38 324 0 1941 149 0 6 chr17 49183801 49184116 -40320437 - AluSq SINE Alu 0 313 1 1440 196 7 14 chr17 49184841 49185132 -40319421 - AluJo SINE Alu -23 289 1 588 273 108 26 chr17 49186527 49186758 -40317795 + MIR SINE MIR 10 259 -3 2267 98 0 0 chr17 49186859 49187164 -40317389 + AluSx SINE Alu 1 305 -7 356 342 74 37 chr17 49187174 49187417 -40317136 + L3 LINE CR1 12 263 -1314 259 215 0 77 chr17 49187576 49187641 -40316912 + MIR SINE MIR 152 211 -51 321 157 0 57 chr17 49188004 49188074 -40316479 + MER103 DNA DNA 20 85 -81 1206 142 219 8 chr17 49188089 49188335 -40316218 - AluYa5 SINE Alu -3 298 1 301 253 13 0 chr17 49188376 49188451 -40316102 + MER103 DNA DNA 42 117 -49 942 178 0 0 chr17 49188560 49188706 -40315847 + MER2 DNA MER2_type 1 146 -199 1803 108 0 0 chr17 49188706 49188947 -40315606 - AluSg SINE Alu -67 243 3 25 75 0 0 chr17 49188949 49189002 -40315551 + AT_rich Low_complexity Low_complexity 1 53 0 275 186 0 0 chr17 49189003 49189046 -40315507 + MER2 DNA MER2_type 281 323 -22 268 274 170 7 chr17 49189207 49189342 -40315211 + L1ME4a LINE L1 5942 6098 -23 450 315 38 38 chr17 49189443 49189681 -40314872 + L3 LINE CR1 647 884 -693 441 254 31 15 chr17 49190328 49190458 -40314095 + L3b LINE CR1 1102 1233 -350 414 280 92 58 chr17 49190556 49190763 -40313790 - MIR SINE MIR -3 259 46 1642 164 6 45 chr17 49190873 49191184 -40313369 - AluJo SINE Alu -13 299 1 2323 133 7 61 chr17 49191359 49191597 -40312956 + MLT1B LTR MaLR 1 209 -181 2221 108 0 3 chr17 49191597 49191904 -40312649 + AluSx SINE Alu 1 306 -6 2323 133 7 61 chr17 49191904 49192077 -40312476 + MLT1B LTR MaLR 209 390 0 408 245 123 32 chr17 49192083 49192238 -40312315 - MIR SINE MIR -77 185 17 2034 134 0 10 chr17 49192484 49192798 -40311755 + AluSx SINE Alu 1 311 -1 302 314 126 53 chr17 49193276 49193483 -40311070 - MIR SINE MIR -32 230 9 180 0 0 0 chr17 49193801 49193821 -40310732 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 961 151 89 192 chr17 49193915 49193989 -40310564 - MLT1A2 LTR MaLR 0 374 294 1995 107 32 32 chr17 49193989 49194299 -40310254 - AluSx SINE Alu -2 310 1 961 151 89 192 chr17 49194299 49194641 -40309912 - MLT1A2 LTR MaLR -80 294 1 1556 171 23 78 chr17 49195056 49195442 -40309111 - MLT1A1 LTR MaLR 0 365 1 347 208 0 10 chr17 49195497 49195593 -40308960 + GA-rich Low_complexity Low_complexity 2 96 0 180 77 0 0 chr17 49196414 49196440 -40308113 + (C)n Simple_repeat Simple_repeat 1 26 0 3539 112 19 4 chr17 49197425 49197909 -40306644 - MER1A DNA MER1_type 0 529 39 192 309 18 0 chr17 49197921 49197976 -40306577 - L2 LINE L2 -49 3264 3209 809 204 32 76 chr17 49198530 49198775 -40305778 + L1MC4 LINE L1 7567 7713 -95 382 76 45 0 chr17 49198786 49198852 -40305701 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 2167 104 3 0 chr17 49200120 49200418 -40304135 + AluSg SINE Alu 1 299 -11 2411 59 0 3 chr17 49201078 49201382 -40303171 - AluY SINE Alu -8 303 1 1980 137 7 0 chr17 49201384 49201676 -40302877 - AluSq SINE Alu -19 294 1 360 283 215 0 chr17 49201959 49202017 -40302536 - MIR SINE MIR -13 249 205 2006 121 0 23 chr17 49202017 49202322 -40302231 + AluSx SINE Alu 1 298 -14 360 283 215 0 chr17 49202322 49202454 -40302099 - MIR SINE MIR -57 205 18 220 272 19 48 chr17 49202505 49202608 -40301945 - L2 LINE L2 0 3313 3214 493 276 162 25 chr17 49202677 49203031 -40301522 - L2 LINE L2 -260 3053 2625 872 180 60 25 chr17 49203509 49203709 -40300844 - MIR SINE MIR -32 230 24 426 311 20 26 chr17 49205361 49205512 -40299041 - MER5A DNA MER1_type -2 187 38 1906 109 41 10 chr17 49205528 49205822 -40298731 - AluSx SINE Alu -5 307 5 222 337 21 32 chr17 49206574 49206669 -40297884 - MER5A DNA MER1_type -27 162 69 2965 98 9 35 chr17 49206677 49207396 -40297157 + L1PB1 LINE L1 5315 6184 0 815 215 31 26 chr17 49207485 49207680 -40296873 - MER20 DNA MER1_type -14 205 10 778 269 149 0 chr17 49209355 49209556 -40294997 - MIR SINE MIR -11 251 21 629 300 78 0 chr17 49210131 49210311 -40294242 - MIR SINE MIR -12 250 57 233 173 0 13 chr17 49210311 49210386 -40294167 + (TA)n Simple_repeat Simple_repeat 2 75 0 2242 97 0 3 chr17 49210443 49210743 -40293810 - AluSp SINE Alu -14 299 1 829 274 107 38 chr17 49211151 49211634 -40292919 + L1ME4a LINE L1 5474 6009 -112 1548 203 62 52 chr17 49211634 49212019 -40292534 - MLT1B LTR MaLR -1 389 1 829 274 107 38 chr17 49212019 49212141 -40292412 + L1ME4a LINE L1 6009 6121 0 2184 102 0 3 chr17 49212280 49212584 -40291969 - AluSx SINE Alu -9 303 1 370 319 37 31 chr17 49213214 49213377 -40291176 + MIR SINE MIR 21 184 -78 203 280 0 0 chr17 49213380 49213430 -40291123 + L2 LINE L2 3183 3232 -40 2149 102 0 20 chr17 49213809 49214114 -40290439 - AluSc SINE Alu -10 299 1 240 299 52 10 chr17 49214284 49214381 -40290172 + MLT1J1 LTR MaLR 346 446 0 476 241 90 21 chr17 49214983 49215128 -40289425 - MLT1J LTR MaLR -257 254 100 629 301 62 46 chr17 49215653 49215743 -40288810 + L3 LINE CR1 240 327 -1250 2092 99 0 7 chr17 49215743 49216035 -40288518 + AluSg1 SINE Alu 1 290 -19 629 301 62 46 chr17 49216035 49216269 -40288284 + L3 LINE CR1 327 569 -1008 508 208 95 176 chr17 49216276 49216646 -40287907 - MER102b DNA MER1_type -1 340 1 1914 274 129 36 chr17 49216646 49217489 -40287064 + L3 LINE CR1 582 1503 -74 1451 174 68 0 chr17 49217658 49217980 -40286573 + AluJb SINE Alu 1 340 0 452 333 14 0 chr17 49218273 49218411 -40286142 - MIR3 SINE MIR -32 176 37 1633 186 10 17 chr17 49219382 49219678 -40284875 + AluJo SINE Alu 1 294 -18 309 198 0 0 chr17 49219700 49219786 -40284767 + GA-rich Low_complexity Low_complexity 3 88 0 2173 220 63 34 chr17 49220396 49220923 -40283630 + MLT1F LTR MaLR 1 542 0 221 83 28 0 chr17 49220941 49220977 -40283576 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 2007 107 4 0 chr17 49221311 49221574 -40282979 - AluSq SINE Alu -12 301 38 244 222 103 60 chr17 49221899 49222084 -40282469 + L1ME4a LINE L1 5928 6120 -1 2788 137 29 14 chr17 49222848 49223338 -40281215 - L1MB3 LINE L1 -2 6181 5685 2023 219 106 2 chr17 49223609 49224062 -40280491 + MLT1D LTR MaLR 6 505 0 300 281 115 29 chr17 49224062 49224201 -40280352 - MIR SINE MIR -25 237 87 1781 144 80 42 chr17 49224636 49224997 -40279556 - THE1C LTR MaLR 0 375 1 2975 141 46 0 chr17 49225926 49226407 -40278146 + Tigger3(Golem) DNA MER2_type 2524 3026 -3 1501 266 52 28 chr17 49226725 49227150 -40277403 - MLT1J LTR MaLR -6 505 71 331 322 9 17 chr17 49227443 49227558 -40276995 + L2 LINE L2 3182 3295 -18 1117 163 62 33 chr17 49227711 49227951 -40276602 + L1ME1 LINE L1 4713 4959 -1187 1783 196 34 43 chr17 49228045 49228682 -40275871 + L1ME1 LINE L1 4942 5579 -587 726 72 0 0 chr17 49228683 49228780 -40275773 + (TTCC)n Simple_repeat Simple_repeat 2 98 0 1642 178 26 23 chr17 49228798 49229107 -40275446 - AluJo SINE Alu -2 310 1 405 302 23 8 chr17 49229109 49229238 -40275315 + L1ME1 LINE L1 5581 5711 -455 32 26 0 0 chr17 49229240 49229279 -40275274 + AT_rich Low_complexity Low_complexity 1 39 0 1142 253 57 59 chr17 49229298 49229757 -40274796 + L1ME1 LINE L1 5700 6157 -9 231 88 0 0 chr17 49229844 49229878 -40274675 + (TA)n Simple_repeat Simple_repeat 2 35 0 2177 147 0 3 chr17 49229959 49230272 -40274281 + AluSx SINE Alu 1 312 0 678 286 146 16 chr17 49230286 49230670 -40273883 + L1M4 LINE L1 3851 4284 -1862 472 290 17 45 chr17 49231258 49231434 -40273119 - MIR SINE MIR -85 177 7 355 291 121 0 chr17 49231555 49231696 -40272857 + MIR SINE MIR 29 186 -76 271 267 133 0 chr17 49231703 49231793 -40272760 - L2 LINE L2 0 3313 3212 1888 184 97 2 chr17 49231798 49232162 -40272391 + L1MC3 LINE L1 6669 7076 -709 6048 118 7 5 chr17 49232162 49233853 -40270700 + L1PA15 LINE L1 4469 6148 -17 1888 184 97 2 chr17 49233853 49233890 -40270663 + L1MC3 LINE L1 7076 7108 -677 2061 174 21 19 chr17 49233890 49234290 -40270263 - MLT1B LTR MaLR -3 406 4 3039 174 21 56 chr17 49234292 49234794 -40269759 + L1MC3 LINE L1 7149 7624 -161 2337 107 7 0 chr17 49234794 49235102 -40269451 - AluSx SINE Alu -2 310 1 3039 174 21 56 chr17 49235102 49235259 -40269294 + L1MC3 LINE L1 7624 7785 0 201 167 45 76 chr17 49235260 49235326 -40269227 - L2 LINE L2 -94 3219 3156 1500 79 0 70 chr17 49235613 49235722 -40268831 + L1PA8 LINE L1 5959 6045 -127 2492 70 3 0 chr17 49235722 49236020 -40268533 + AluSp SINE Alu 1 299 -14 1500 79 0 70 chr17 49236020 49236139 -40268414 + L1PA8 LINE L1 6045 6171 -1 677 71 0 0 chr17 49236259 49236343 -40268210 - AluSp SINE Alu -202 111 28 1474 116 4 13 chr17 49236373 49236598 -40267955 + Tigger3(Golem) DNA MER2_type 2575 2797 -232 299 277 59 0 chr17 49236637 49236738 -40267815 - MIR SINE MIR -82 180 74 2328 101 0 0 chr17 49236738 49237045 -40267508 + AluSx SINE Alu 3 309 -3 234 174 0 0 chr17 49237857 49237903 -40266650 + A-rich Low_complexity Low_complexity 1 46 0 286 221 130 46 chr17 49238354 49238485 -40266068 + MIR SINE MIR 9 146 -62 189 289 144 0 chr17 49238516 49238613 -40265940 - L2 LINE L2 -20 3293 3183 761 207 0 28 chr17 49238920 49239099 -40265454 - MER96B DNA MER1_type? 0 417 244 2186 115 3 0 chr17 49239752 49240048 -40264505 + AluSp SINE Alu 1 297 -16 292 265 71 83 chr17 49241505 49241601 -40262952 + L1MEd LINE L1 688 784 -5421 249 83 0 0 chr17 49241601 49241637 -40262916 + (CAT)n Simple_repeat Simple_repeat 3 38 0 292 265 71 83 chr17 49241637 49242035 -40262518 + L1MEd LINE L1 784 1176 -5029 2248 119 3 0 chr17 49242041 49242344 -40262209 + AluSp SINE Alu 1 304 -9 288 292 53 12 chr17 49242351 49242522 -40262031 + L1MEd LINE L1 1640 1817 -4579 6432 270 46 41 chr17 49242586 49242864 -40261689 + L1MEd LINE L1 2059 2334 -3905 2181 112 3 0 chr17 49242864 49243151 -40261402 - AluSx SINE Alu -24 288 1 6432 270 46 41 chr17 49243151 49246866 -40257687 + L1MEd LINE L1 2334 6031 -208 265 278 0 44 chr17 49247022 49247112 -40257441 + L1ME3A LINE L1 6133 6218 -21 1653 164 32 4 chr17 49247459 49247739 -40256814 - AluJo SINE Alu -24 288 1 883 142 0 15 chr17 49247795 49247929 -40256624 + FLAM_C SINE Alu 2 133 0 192 77 0 0 chr17 49247967 49247993 -40256560 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr17 49248062 49248086 -40256467 + AT_rich Low_complexity Low_complexity 1 24 0 515 65 39 0 chr17 49249179 49249256 -40255297 + MADE1 DNA Mariner 1 80 0 306 310 125 22 chr17 49249566 49249676 -40254877 + L1ME4a LINE L1 5703 5800 -321 1829 166 0 10 chr17 49249676 49249972 -40254581 + AluSx SINE Alu 1 293 -19 306 310 125 22 chr17 49249972 49250045 -40254508 + L1ME4a LINE L1 5800 5905 -216 368 125 0 0 chr17 49250099 49250155 -40254398 - MLT2B1 LTR ERVL 0 520 465 1239 164 4 31 chr17 49250165 49250258 -40254295 - MLT2C1 LTR ERVL -143 254 160 2737 106 31 19 chr17 49250258 49250681 -40253872 - MSTA LTR MaLR 0 428 1 1239 164 4 31 chr17 49250681 49250812 -40253741 - MLT2C1 LTR ERVL -237 160 36 1814 170 27 45 chr17 49250812 49251188 -40253365 - MER74A LTR ERVL 0 558 190 1318 138 234 43 chr17 49251193 49251497 -40253056 - THE1B LTR MaLR -2 362 1 857 197 56 6 chr17 49251498 49251676 -40252877 - MER74A LTR ERVL -368 190 4 334 206 106 57 chr17 49251701 49251842 -40252711 + L1ME4a LINE L1 5963 6110 -11 437 333 0 22 chr17 49252163 49252346 -40252207 + (TG)n Simple_repeat Simple_repeat 2 180 0 433 202 54 47 chr17 49252613 49252742 -40251811 + MER20B DNA MER1_type 7 136 -647 356 236 155 31 chr17 49253691 49253852 -40250701 + MER5A DNA MER1_type 9 189 0 2042 141 0 0 chr17 49254020 49254344 -40250209 - AluSx SINE Alu 0 324 1 256 330 11 0 chr17 49254554 49254642 -40249911 + MIR SINE MIR 30 118 -90 1832 176 14 0 chr17 49255095 49255391 -40249162 - AluJb SINE Alu -12 300 1 2615 163 39 21 chr17 49255439 49255953 -40248600 - L1MC2 LINE L1 -16 6328 5806 210 71 0 0 chr17 49257505 49257533 -40247020 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 228 224 0 17 chr17 49258239 49258297 -40246256 + MIR SINE MIR 86 142 -66 306 14 58 43 chr17 49259249 49259318 -40245235 + (CAAAAA)n Simple_repeat Simple_repeat 3 72 0 632 256 97 47 chr17 49259339 49259679 -40244874 + L1ME4a LINE L1 5595 5951 -219 496 157 21 21 chr17 49259724 49259864 -40244689 + GA-rich Low_complexity Low_complexity 2 141 0 204 97 0 0 chr17 49260769 49260800 -40243753 + (T)n Simple_repeat Simple_repeat 1 31 0 432 143 0 0 chr17 49260800 49260863 -40243690 - AluY SINE Alu -130 181 119 200 35 35 0 chr17 49260870 49260899 -40243654 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1227 106 0 53 chr17 49260899 49261027 -40243526 - L1MA3 LINE L1 -3 6302 6188 2215 111 19 3 chr17 49261027 49261334 -40243219 - AluSx SINE Alu 0 312 1 1227 106 0 53 chr17 49261334 49261412 -40243141 - L1MA3 LINE L1 -117 6188 6107 309 47 0 0 chr17 49261439 49261482 -40243071 - L1PA15 LINE L1 -9 6156 6114 2338 115 0 0 chr17 49261712 49262024 -40242529 - AluSx SINE Alu 0 312 1 224 233 0 17 chr17 49262097 49262157 -40242396 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 347 289 94 8 chr17 49263588 49263716 -40240837 - MIR3 SINE MIR -10 198 60 2563 61 0 3 chr17 49264449 49264761 -40239792 - AluY SINE Alu 0 311 1 270 221 118 63 chr17 49265300 49265427 -40239126 + L1ME4a LINE L1 5974 6107 -14 2428 197 22 43 chr17 49265940 49266180 -40238373 + L1MB7 LINE L1 5599 5843 -341 919 224 71 62 chr17 49266180 49266520 -40238033 - MER2 DNA MER2_type 0 344 2 2428 197 22 43 chr17 49266520 49266878 -40237675 + L1MB7 LINE L1 5843 6184 0 274 232 101 0 chr17 49267632 49267701 -40236852 - MIR SINE MIR -23 239 164 205 246 164 0 chr17 49267907 49267968 -40236585 - MIR SINE MIR -111 151 81 356 313 27 0 chr17 49268025 49268175 -40236378 + MER5B DNA MER1_type 5 158 -20 689 246 0 37 chr17 49268304 49268491 -40236062 - MIR SINE MIR -9 253 74 2108 120 3 13 chr17 49268508 49268807 -40235746 - AluSx SINE Alu -16 296 1 911 245 151 53 chr17 49269090 49269506 -40235047 + MLT1C LTR MaLR 6 462 -5 279 0 0 0 chr17 49269535 49269566 -40234987 + (TA)n Simple_repeat Simple_repeat 1 31 0 2177 109 3 7 chr17 49269567 49269861 -40234692 - AluSx SINE Alu -16 296 4 772 270 101 93 chr17 49269882 49270464 -40234089 + MLT1K LTR MaLR 2 588 0 798 217 92 39 chr17 49271988 49272195 -40232358 + MER20 DNA MER1_type 2 219 0 2130 97 61 50 chr17 49272234 49272594 -40231959 + THE1B LTR MaLR 1 364 0 507 230 89 87 chr17 49272859 49273283 -40231270 - MLT1J2 LTR MaLR -2 428 35 1013 234 99 3 chr17 49273883 49274195 -40230358 - Charlie4a DNA MER1_type -3 505 164 324 259 0 0 chr17 49274286 49274371 -40230182 - Charlie4a DNA MER1_type -361 147 63 355 162 50 141 chr17 49274403 49274502 -40230051 - Charlie4a DNA MER1_type -418 90 1 525 244 0 16 chr17 49275153 49275276 -40229277 + MIR3 SINE MIR 46 166 -42 821 170 21 85 chr17 49275326 49275514 -40229039 - MER5B DNA MER1_type -2 176 1 320 221 26 0 chr17 49275728 49275805 -40228748 + MIR SINE MIR 67 145 -63 305 264 240 0 chr17 49275825 49275954 -40228599 - MIR SINE MIR -6 256 97 289 162 122 14 chr17 49276012 49276086 -40228467 + MER53 DNA DNA 3 84 -105 559 292 124 41 chr17 49276154 49277016 -40227537 - L1M4 LINE L1 -827 5319 4386 459 214 23 0 chr17 49277044 49277175 -40227378 + CT-rich Low_complexity Low_complexity 1 134 0 1533 167 102 0 chr17 49277175 49277439 -40227114 - AluJo SINE Alu -20 292 2 662 150 22 33 chr17 49278444 49278624 -40225929 + CT-rich Low_complexity Low_complexity 2 179 0 2065 129 13 7 chr17 49278624 49279001 -40225552 - AluSx SINE Alu 0 379 1 252 0 0 0 chr17 49281555 49281583 -40222970 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 594 300 7 13 chr17 49281604 49281754 -40222799 + MER91A DNA MER1_type 1 149 -47 343 303 114 29 chr17 49282006 49282181 -40222372 - MER117 DNA MER1_type -3 194 5 314 175 12 50 chr17 49282205 49282285 -40222268 - MLT1F LTR MaLR -13 529 453 1874 153 17 0 chr17 49282637 49282924 -40221629 + AluJo SINE Alu 1 292 -20 1704 188 0 3 chr17 49283890 49284177 -40220376 + AluJb SINE Alu 1 286 -26 279 0 0 0 chr17 49284186 49284217 -40220336 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 523 265 211 0 chr17 49284455 49284640 -40219913 - MIR SINE MIR -35 227 4 2277 97 7 3 chr17 49284683 49284981 -40219572 + AluSq SINE Alu 1 299 -14 2414 99 0 0 chr17 49286164 49286467 -40218086 - AluSx SINE Alu -9 303 1 696 237 148 40 chr17 49287235 49287513 -40217040 + MLT1J LTR MaLR 2 309 -202 904 182 96 25 chr17 49287562 49287760 -40216793 + MLT1A1 LTR MaLR 1 212 -153 3150 118 25 0 chr17 49288066 49288540 -40216013 + L1PA10 LINE L1 5682 6167 -1 262 329 38 0 chr17 49288691 49288770 -40215783 - MIR SINE MIR -75 187 106 187 298 0 21 chr17 49290268 49290315 -40214238 + MER5C DNA MER1_type 8 53 -271 2092 125 24 3 chr17 49290622 49290911 -40213642 - AluSx SINE Alu -17 295 1 2228 118 7 0 chr17 49291545 49291849 -40212704 - AluSx SINE Alu -6 306 1 216 0 0 0 chr17 49292004 49292028 -40212525 + (A)n Simple_repeat Simple_repeat 1 24 0 314 236 9 18 chr17 49292518 49292744 -40211809 + CT-rich Low_complexity Low_complexity 1 224 0 443 190 15 33 chr17 49292773 49293016 -40211537 + CT-rich Low_complexity Low_complexity 1 238 0 212 158 18 0 chr17 49293959 49294016 -40210537 + (TA)n Simple_repeat Simple_repeat 2 59 0 1806 161 17 3 chr17 49296077 49296369 -40208184 - AluJb SINE Alu -16 296 1 186 288 15 30 chr17 49296536 49296602 -40207951 + MIR SINE MIR 30 94 -114 612 256 68 14 chr17 49296654 49296861 -40207692 - MIR SINE MIR 0 262 45 2314 114 0 0 chr17 49296983 49297291 -40207262 + AluSx SINE Alu 1 308 -4 216 0 0 0 chr17 49297291 49297315 -40207238 + (TA)n Simple_repeat Simple_repeat 2 25 0 1887 137 0 37 chr17 49297392 49297691 -40206862 + AluSx SINE Alu 1 288 -24 314 291 15 30 chr17 49297790 49297924 -40206629 - L1ME3A LINE L1 0 6170 6039 1199 204 50 32 chr17 49298074 49298102 -40206451 + MER58B DNA MER1_type 57 83 -2337 2025 152 0 3 chr17 49298102 49298398 -40206155 + AluJb SINE Alu 5 299 -13 1199 204 50 32 chr17 49298398 49298648 -40205905 + MER58B DNA MER1_type 83 340 -1 1175 271 20 38 chr17 49300085 49300536 -40204017 + MER113 DNA MER1_type? 76 518 -3 3327 124 85 9 chr17 49300541 49301095 -40203458 - Tigger1 DNA MER2_type 0 2418 1823 6247 139 29 16 chr17 49301097 49302356 -40202197 + L1MA5 LINE L1 4801 6042 -258 2066 158 9 23 chr17 49302356 49302698 -40201855 - MER1B DNA MER1_type 0 337 1 6247 139 29 16 chr17 49302698 49302765 -40201788 + L1MA5 LINE L1 6042 6107 -193 2119 141 0 3 chr17 49302765 49303078 -40201475 - AluSx SINE Alu 0 312 1 6247 139 29 16 chr17 49303078 49303245 -40201308 + L1MA5 LINE L1 6107 6300 0 11533 108 23 7 chr17 49303246 49304902 -40199651 - Tigger1 DNA MER2_type -631 1787 106 2209 113 7 3 chr17 49304903 49305289 -40199264 + AluSx SINE Alu 1 387 0 513 188 10 10 chr17 49305290 49305386 -40199167 - Tigger1 DNA MER2_type -2301 117 22 219 279 199 20 chr17 49305391 49305592 -40198961 + MIR SINE MIR 14 250 -12 304 238 133 19 chr17 49305593 49305663 -40198890 - L2 LINE L2 0 3272 3185 2359 43 43 0 chr17 49305663 49305945 -40198608 + AluY SINE Alu 12 305 -6 304 238 133 19 chr17 49305945 49305979 -40198574 - L2 LINE L2 -87 3185 3156 269 200 0 0 chr17 49306430 49306475 -40198078 + MER69 DNA AcHobo 23 67 -2459 725 23 0 0 chr17 49306611 49306699 -40197854 - L1PA4 LINE L1 -3 6152 6065 255 179 0 179 chr17 49306701 49306796 -40197757 + MER69 DNA AcHobo 2448 2525 -1 2479 53 0 0 chr17 49307247 49307563 -40196990 - AluY SINE Alu 0 316 1 239 79 26 0 chr17 49307672 49307710 -40196843 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 2143 147 0 3 chr17 49307712 49308024 -40196529 - AluSx SINE Alu -1 311 1 515 264 25 19 chr17 49308219 49308378 -40196175 - MLT1K LTR MaLR 0 588 429 888 276 30 24 chr17 49308428 49308725 -40195828 - LTR16C LTR ERVL 0 491 193 1043 267 30 18 chr17 49309106 49309439 -40195114 - MER102b DNA MER1_type -4 337 1 490 191 0 27 chr17 49309449 49309559 -40194994 - MIR SINE MIR -58 150 44 1124 220 0 9 chr17 49309631 49309849 -40194704 + MER58A DNA MER1_type 9 224 0 586 83 0 24 chr17 49310144 49310228 -40194325 - AluSp/q SINE Alu -56 257 176 2314 93 0 0 chr17 49311500 49311790 -40192763 + AluSg SINE Alu 1 290 -20 545 45 0 0 chr17 49312435 49312501 -40192052 - MADE1 DNA Mariner -14 66 1 525 255 130 9 chr17 49312571 49312802 -40191751 + MIR SINE MIR 1 259 -3 233 241 126 11 chr17 49312890 49312977 -40191576 - L1ME2 LINE L1 -5 6159 6063 1497 183 62 0 chr17 49312982 49313321 -40191232 - L1ME2 LINE L1 -166 5996 5637 1993 113 60 0 chr17 49313357 49313639 -40190914 - AluSx SINE Alu -13 299 1 1797 155 15 107 chr17 49313640 49313983 -40190570 + MLT1B LTR MaLR 33 337 -53 2416 91 0 0 chr17 49313983 49314280 -40190273 + AluSg SINE Alu 1 297 -13 1797 155 15 107 chr17 49314280 49314330 -40190223 + MLT1B LTR MaLR 337 390 0 263 221 0 139 chr17 49314330 49314416 -40190137 - L1ME2 LINE L1 -520 5650 5577 236 271 0 0 chr17 49314472 49314542 -40190011 + (TA)n Simple_repeat Simple_repeat 1 70 0 345 244 49 16 chr17 49314642 49314765 -40189788 + L1ME4a LINE L1 5988 6114 -7 368 271 35 14 chr17 49314791 49314935 -40189618 + L1ME4a LINE L1 5964 6110 -11 540 215 25 37 chr17 49315024 49315187 -40189366 - MER104 DNA Tc2 -2 178 18 202 280 103 19 chr17 49315617 49315724 -40188829 - MIR SINE MIR -70 192 77 3090 199 11 16 chr17 49315816 49316443 -40188110 - MER63 DNA MER1_type -4 1056 433 2208 143 19 38 chr17 49316874 49317244 -40187309 + THE1B LTR MaLR 2 364 0 2116 155 33 28 chr17 49317360 49317722 -40186831 + THE1B LTR MaLR 1 364 0 572 326 11 0 chr17 49318094 49318275 -40186278 - L3 LINE CR1 -148 1429 1247 271 270 180 0 chr17 49318296 49318407 -40186146 - MIR SINE MIR -12 250 120 936 266 120 8 chr17 49318407 49318666 -40185887 + MER115 DNA AcHobo 406 693 0 285 29 0 0 chr17 49519083 49519117 -39985436 + (TC)n Simple_repeat Simple_repeat 1 34 0 * 297 0 0 0 chr17 49519116 49519149 -39985404 + (CA)n Simple_repeat Simple_repeat 1 33 0 240 291 111 34 chr17 49520134 49520179 -39984374 + L2 LINE L2 3146 3186 -86 215 30 0 30 chr17 49520179 49520212 -39984341 + (CAAAA)n Simple_repeat Simple_repeat 5 36 0 240 291 111 34 chr17 49520212 49520283 -39984270 + L2 LINE L2 3186 3271 -1 350 247 41 0 chr17 49521025 49521122 -39983431 + MIR SINE MIR 31 131 -77 290 232 0 125 chr17 49521541 49521653 -39982900 - MER5C DNA MER1_type -224 100 3 201 262 75 56 chr17 49522422 49522529 -39982024 - MIR SINE MIR -81 127 19 1293 178 5 5 chr17 49522651 49522870 -39981683 - MER20 DNA MER1_type 0 219 1 252 343 43 21 chr17 49522879 49523019 -39981534 + MER5B DNA MER1_type 2 144 -34 1548 134 0 0 chr17 49524488 49524719 -39979834 - AluSx SINE Alu -80 232 2 1889 142 13 10 chr17 49524757 49525067 -39979486 + AluJb SINE Alu 1 311 -1 320 27 0 0 chr17 49527428 49527465 -39977088 + MLT2A1 LTR ERVL 407 443 -1 472 153 0 0 chr17 49527465 49527537 -39977016 + AluJ/FLAM SINE Alu 7 78 -234 340 180 11 22 chr17 49527537 49527626 -39976927 + CT-rich Low_complexity Low_complexity 4 91 0 390 255 11 0 chr17 49527629 49527723 -39976830 - AluJb SINE Alu -1 301 207 707 112 0 0 chr17 49527724 49527822 -39976731 + AluJo/FRAM SINE Alu 202 299 -13 468 182 282 35 chr17 49527883 49527965 -39976588 + MER20 DNA MER1_type 3 63 -156 2262 87 3 0 chr17 49527965 49528263 -39976290 - AluSp SINE Alu -14 299 1 468 182 282 35 chr17 49528263 49528350 -39976203 + MER20 DNA MER1_type 63 214 -5 1313 146 10 0 chr17 49528921 49529127 -39975426 - AluJb SINE Alu -20 292 85 189 0 0 0 chr17 49529128 49529149 -39975404 + (T)n Simple_repeat Simple_repeat 1 21 0 9428 44 12 85 chr17 49529906 49531349 -39973204 - SVA Other Other 0 1386 50 2218 97 0 3 chr17 49531479 49531778 -39972775 - AluSx SINE Alu -14 298 1 360 234 63 34 chr17 49531855 49531890 -39972663 - MIR3 SINE MIR -1 207 174 942 189 82 5 chr17 49531890 49532096 -39972457 + MER58A DNA MER1_type 3 224 0 360 234 63 34 chr17 49532096 49532202 -39972351 - MIR3 SINE MIR -34 174 65 1983 112 3 7 chr17 49532431 49532763 -39971790 + AluSx SINE Alu 1 331 0 237 219 57 65 chr17 49532839 49532962 -39971591 + L1MC/D LINE L1 5604 5725 -2083 568 207 36 0 chr17 49533431 49533571 -39970982 - L1M4 LINE L1 -3558 2588 2444 697 168 67 96 chr17 49534480 49534623 -39969930 + MER3 DNA MER1_type 8 145 -64 1226 221 13 24 chr17 49534623 49534921 -39969632 - AluJo SINE Alu -17 295 1 697 168 67 96 chr17 49534921 49534985 -39969568 + MER3 DNA MER1_type 145 209 0 1363 242 69 31 chr17 49535181 49535708 -39968845 + L1M4 LINE L1 2399 2921 -3225 4778 53 12 0 chr17 49535880 49536464 -39968089 + LTR10C LTR ERV1 1 591 0 743 95 0 0 chr17 49536573 49536668 -39967885 + AluS SINE Alu 2 96 -216 691 122 28 0 chr17 49536669 49536776 -39967777 + AluSg/x SINE Alu 198 307 -3 2377 173 61 38 chr17 49536776 49536959 -39967594 + L1MB7 LINE L1 5599 5776 -408 620 164 8 67 chr17 49536959 49537093 -39967460 + FLAM_A SINE Alu 2 127 -6 2377 173 61 38 chr17 49537093 49537482 -39967071 + L1MB7 LINE L1 5776 6184 0 1942 115 3 7 chr17 49537807 49538095 -39966458 + AluSg SINE Alu 1 287 -23 1159 121 12 0 chr17 49538195 49538368 -39966185 - AluSq SINE Alu -110 203 29 26 0 0 0 chr17 49538390 49538416 -39966137 + AT_rich Low_complexity Low_complexity 1 26 0 243 140 20 20 chr17 49538470 49538520 -39966033 - Charlie8 DNA MER1_type -989 1428 1379 1020 228 49 42 chr17 49538539 49538669 -39965884 - MLT1A2 LTR MaLR 0 374 246 2784 159 2 56 chr17 49538669 49538773 -39965780 - MER66B LTR ERV1 0 486 378 1782 140 39 7 chr17 49538773 49539059 -39965494 - AluSx SINE Alu -17 295 1 2784 159 2 56 chr17 49539059 49539295 -39965258 - MER66B LTR ERV1 -108 378 181 2100 111 0 0 chr17 49539295 49539583 -39964970 + AluSg SINE Alu 1 288 -22 2784 159 2 56 chr17 49539583 49539755 -39964798 - MER66B LTR ERV1 -305 181 1 1020 228 49 42 chr17 49539755 49539909 -39964644 - MLT1A2 LTR MaLR -128 246 88 1881 117 0 77 chr17 49539916 49540088 -39964465 - AluSx SINE Alu -13 299 162 1999 97 3 42 chr17 49540088 49540396 -39964157 - AluY SINE Alu -15 296 1 1881 117 0 77 chr17 49540396 49540547 -39964006 - AluSx SINE Alu -150 162 1 1671 204 36 13 chr17 49540556 49540841 -39963712 + L1M4 LINE L1 4033 4331 -1815 2042 128 7 0 chr17 49540841 49541146 -39963407 + AluSg SINE Alu 1 307 -3 1671 204 36 13 chr17 49541146 49541253 -39963300 + L1M4 LINE L1 4331 4434 -1712 2442 59 0 0 chr17 49541329 49541632 -39962921 - AluY SINE Alu -8 303 1 2858 198 41 48 chr17 49541647 49541708 -39962845 + L1M4 LINE L1 4271 4331 -1815 854 233 12 6 chr17 49541708 49541880 -39962673 - FAM SINE Alu -2 173 1 2858 198 41 48 chr17 49541880 49542385 -39962168 + L1M4 LINE L1 4331 4833 -1313 1413 157 50 60 chr17 49542385 49542536 -39962017 - AluJb SINE Alu -15 297 149 2168 106 3 0 chr17 49542536 49542829 -39961724 - AluSp SINE Alu -19 294 1 1413 157 50 60 chr17 49542829 49542977 -39961576 - AluJb SINE Alu -163 149 1 2858 198 41 48 chr17 49542977 49543140 -39961413 + L1M4 LINE L1 4833 4996 -1150 1335 102 0 56 chr17 49543193 49543362 -39961191 - AluSc SINE Alu -17 292 136 2277 79 3 7 chr17 49543362 49543666 -39960887 - AluSp SINE Alu -10 303 1 1335 102 0 56 chr17 49543666 49543711 -39960842 - AluSc SINE Alu -173 136 90 318 162 29 15 chr17 49543711 49543779 -39960774 + L1M4 LINE L1 5038 5106 -1040 457 113 0 14 chr17 49543781 49543852 -39960701 + L1M4 LINE L1 5598 5667 -511 1157 137 0 97 chr17 49543874 49543918 -39960635 + AluSg/x SINE Alu 95 142 -168 2109 116 13 0 chr17 49543918 49544219 -39960334 + AluSx SINE Alu 6 310 -2 1157 137 0 97 chr17 49544219 49544400 -39960153 + AluSg/x SINE Alu 142 298 -12 361 184 53 26 chr17 49544431 49544545 -39960008 + HAL1 LINE L1 971 1087 -1420 1525 128 0 0 chr17 49544548 49544767 -39959786 + AluSx SINE Alu 1 219 -93 781 134 0 0 chr17 49544767 49544886 -39959667 + AluSg/x SINE Alu 186 304 -6 732 236 6 6 chr17 49544952 49545113 -39959440 - FRAM SINE Alu -17 159 1 414 200 22 0 chr17 49545179 49545269 -39959284 + AluJo/FLAM SINE Alu 42 133 -169 1443 114 0 0 chr17 49545269 49545470 -39959083 - AluSx SINE Alu -5 305 105 733 123 28 0 chr17 49545514 49545620 -39958933 - AluSx SINE Alu -202 110 2 1890 133 17 0 chr17 49545621 49545914 -39958639 - AluSx SINE Alu -14 298 1 2203 88 7 0 chr17 49546012 49546307 -39958246 - AluSq SINE Alu -16 297 1 787 325 77 43 chr17 49546335 49546775 -39957778 + L2 LINE L2 2315 2769 -545 200 216 0 0 chr17 49546832 49546869 -39957684 + MER5A DNA MER1_type 1 37 -152 1219 161 5 0 chr17 49546932 49547137 -39957416 - AluSg/x SINE Alu -4 306 101 2104 93 6 22 chr17 49547137 49547450 -39957103 + AluSx SINE Alu 1 308 -4 1947 109 3 13 chr17 49547452 49547754 -39956799 + AluSq SINE Alu 1 299 -14 194 177 0 65 chr17 49548234 49548296 -39956257 + A-rich Low_complexity Low_complexity 1 58 0 215 226 48 48 chr17 49549181 49549243 -39955310 - MIR3 SINE MIR -19 189 128 183 129 0 0 chr17 49549392 49549423 -39955130 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 21 36 0 0 chr17 49549977 49550005 -39954548 + AT_rich Low_complexity Low_complexity 1 28 0 997 104 0 28 chr17 49550553 49550697 -39953856 + L1PA8A LINE L1 5992 6131 0 1786 115 4 18 chr17 49550853 49551131 -39953422 + AluSx SINE Alu 1 274 -38 240 351 112 8 chr17 49551300 49551434 -39953119 - L2 LINE L2 -4 3268 3121 2064 102 3 23 chr17 49551469 49551772 -39952781 + AluSp SINE Alu 1 297 -16 2080 112 7 0 chr17 49552066 49552361 -39952192 + AluSg SINE Alu 1 297 -13 189 0 0 0 chr17 49552880 49552901 -39951652 + (CGGGG)n Simple_repeat Simple_repeat 3 23 0 22 88 0 0 chr17 49554076 49554133 -39950420 + GC_rich Low_complexity Low_complexity 1 57 0 1154 149 15 0 chr17 49555042 49555237 -39949316 + AluSq SINE Alu 115 312 -1 1813 125 7 7 chr17 49555295 49555575 -39948978 + AluSx SINE Alu 12 291 -21 1436 127 9 5 chr17 49555615 49555835 -39948718 - AluSx SINE Alu -91 221 1 1147 225 141 7 chr17 49555839 49556115 -39948438 - MER21B LTR ERV1 -550 313 1 347 209 40 115 chr17 49556207 49556355 -39948198 - MER20B DNA MER1_type -646 137 1 247 222 0 19 chr17 49556516 49556570 -39947983 - L2 LINE L2 0 3313 3261 1828 115 65 0 chr17 49556821 49557099 -39947454 + AluSg SINE Alu 1 296 -14 377 167 0 0 chr17 49557129 49557189 -39947364 + AluSp SINE Alu 75 134 -169 1884 124 7 0 chr17 49557315 49557605 -39946948 - AluSx SINE Alu -20 292 1 1089 173 6 130 chr17 49557670 49558017 -39946536 - AluSp SINE Alu 0 313 10 1903 117 43 0 chr17 49558919 49559200 -39945353 + AluSx SINE Alu 1 293 -19 1475 174 22 7 chr17 49559250 49559526 -39945027 + AluJb SINE Alu 12 291 -21 1549 175 4 0 chr17 49559526 49559815 -39944738 - AluJb SINE Alu 0 302 13 879 110 0 0 chr17 49560025 49560143 -39944410 + AluSq/x SINE Alu 1 118 -194 21 0 0 0 chr17 49560147 49560168 -39944385 + AT_rich Low_complexity Low_complexity 1 21 0 1310 222 42 10 chr17 49560193 49560481 -39944072 + AluJb SINE Alu 1 297 -5 1870 149 13 3 chr17 49560664 49560966 -39943587 + AluSx SINE Alu 1 305 -7 529 43 143 0 chr17 49560968 49561038 -39943515 + MER41B LTR ERV1 171 250 -385 877 183 44 0 chr17 49561042 49561065 -39943488 + AluJb SINE Alu 113 134 -178 1850 132 45 0 chr17 49561065 49561354 -39943199 + AluSx SINE Alu 1 302 -10 877 183 44 0 chr17 49561354 49561510 -39943043 + AluJb SINE Alu 134 300 -12 362 228 82 25 chr17 49563923 49564081 -39940472 + MER113 DNA MER1_type? 11 177 -344 2040 122 0 6 chr17 49564125 49564437 -39940116 + AluSg SINE Alu 1 310 0 1682 142 21 18 chr17 49564502 49564784 -39939769 + AluJo SINE Alu 7 289 -23 393 264 72 30 chr17 49564797 49564964 -39939589 + MER113 DNA MER1_type? 338 511 -10 7582 72 2 1 chr17 49565084 49566052 -39938501 + LTR5 LTR ERVK 1 969 0 298 291 13 0 chr17 49566447 49566526 -39938027 + L1ME LINE L1 5537 5616 -554 2129 111 3 0 chr17 49566531 49566829 -39937724 - AluSx SINE Alu -13 299 1 1726 160 0 22 chr17 49566944 49567256 -39937297 + AluJo SINE Alu 1 305 -7 2324 68 3 3 chr17 49567260 49567570 -39936983 + AluY SINE Alu 1 310 -1 21 36 0 0 chr17 49567619 49567647 -39936906 + AT_rich Low_complexity Low_complexity 1 28 0 2083 112 14 0 chr17 49567718 49568013 -39936540 + AluSx SINE Alu 1 299 -13 897 187 0 0 chr17 49568016 49568171 -39936382 + AluJo SINE Alu 85 239 -73 669 170 0 0 chr17 49568171 49568283 -39936270 + AluJo/FRAM SINE Alu 200 311 -1 329 229 167 10 chr17 49568331 49568427 -39936126 - L2 LINE L2 0 3313 3203 733 276 102 0 chr17 49568477 49568742 -39935811 + HAL1 LINE L1 1367 1658 -849 1802 162 3 7 chr17 49568786 49569095 -39935458 + AluSx SINE Alu 1 308 -4 722 138 21 76 chr17 49569122 49569267 -39935286 - FLAM_C SINE Alu 0 143 7 1905 135 30 0 chr17 49569278 49569574 -39934979 - AluSx SINE Alu -7 305 1 520 266 82 140 chr17 49569639 49569869 -39934684 + HAL1 LINE L1 1824 2066 -441 1853 171 23 0 chr17 49569869 49570174 -39934379 + AluJb SINE Alu 1 312 0 2259 139 0 0 chr17 49570178 49570487 -39934066 + AluSx SINE Alu 1 309 -3 520 266 82 140 chr17 49570487 49570562 -39933991 + HAL1 LINE L1 2069 2147 -360 2223 131 0 0 chr17 49570562 49570868 -39933685 + AluSq SINE Alu 1 306 -7 520 266 82 140 chr17 49570868 49570958 -39933595 + HAL1 LINE L1 2147 2241 -266 2208 104 0 0 chr17 49570958 49571286 -39933267 + AluSg1 SINE Alu 1 328 0 520 266 82 140 chr17 49571286 49571407 -39933146 + HAL1 LINE L1 2241 2367 -140 2171 102 7 7 chr17 49571407 49571701 -39932852 + AluSx SINE Alu 1 294 -18 520 266 82 140 chr17 49571701 49571713 -39932840 + HAL1 LINE L1 2367 2378 -129 2033 117 37 7 chr17 49571713 49572013 -39932540 + AluSq SINE Alu 5 313 0 520 266 82 140 chr17 49572013 49572158 -39932395 + HAL1 LINE L1 2378 2468 -39 2274 118 0 9 chr17 49572554 49572869 -39931684 + AluJb SINE Alu 1 312 0 2352 88 3 0 chr17 49573469 49573766 -39930787 + AluSq SINE Alu 1 298 -15 192 77 0 0 chr17 49573894 49573920 -39930633 + (CA)n Simple_repeat Simple_repeat 2 27 0 2315 102 6 16 chr17 49574469 49574784 -39929769 + AluSp SINE Alu 2 313 0 185 65 32 0 chr17 49575829 49575860 -39928693 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2226 97 3 3 chr17 49576941 49577231 -39927322 + AluSq SINE Alu 1 290 -23 2026 138 3 3 chr17 49577595 49577884 -39926669 + AluSg SINE Alu 1 289 -21 2241 114 0 43 chr17 49578179 49578504 -39926049 + AluSp SINE Alu 1 311 -2 2160 111 24 0 chr17 49578754 49579042 -39925511 - AluSg SINE Alu -15 295 1 24 0 0 0 chr17 49580066 49580090 -39924463 + AT_rich Low_complexity Low_complexity 1 24 0 2243 70 42 0 chr17 49580122 49580406 -39924147 - AluSp SINE Alu -17 296 1 23 0 0 0 chr17 49580654 49580677 -39923876 + AT_rich Low_complexity Low_complexity 1 23 0 1018 96 7 7 chr17 49581345 49581481 -39923072 + AluSx SINE Alu 7 142 -170 1310 85 6 6 chr17 49581592 49581768 -39922785 + AluSx SINE Alu 135 310 0 21 0 0 0 chr17 49582643 49582664 -39921889 + GC_rich Low_complexity Low_complexity 1 21 0 731 211 0 21 chr17 49582769 49582911 -39921642 + AluJb SINE Alu 162 300 -12 1768 207 61 47 chr17 49582934 49583074 -39921479 + L1ME1 LINE L1 5356 5493 -673 2611 58 0 3 chr17 49583074 49583386 -39921167 + AluY SINE Alu 1 311 0 1768 207 61 47 chr17 49583386 49583752 -39920801 + L1ME1 LINE L1 5493 5869 -297 2369 86 0 3 chr17 49583803 49584104 -39920449 + AluSq SINE Alu 1 300 -13 278 268 81 89 chr17 49584108 49584477 -39920076 + L1MC3 LINE L1 3764 4129 -2017 323 292 86 79 chr17 49584539 49584830 -39919723 + L1MC3 LINE L1 4134 4426 -1720 2184 98 0 7 chr17 49584872 49585200 -39919353 + AluSx SINE Alu 2 327 0 300 239 200 56 chr17 49585220 49585243 -39919310 + L1MC3 LINE L1 5459 5477 -687 2225 104 0 0 chr17 49585243 49585530 -39919023 + AluSx SINE Alu 23 309 -3 300 239 200 56 chr17 49585530 49585840 -39918713 + L1MC3 LINE L1 5477 5775 -389 3554 112 42 27 chr17 49585840 49585940 -39918613 - MER1A DNA MER1_type -2173 527 430 2463 88 0 0 chr17 49585940 49586234 -39918319 - AluSg SINE Alu -16 294 1 3554 112 42 27 chr17 49586234 49586652 -39917901 - MER1A DNA MER1_type -2270 430 1 300 239 200 56 chr17 49586652 49586712 -39917841 + L1MC3 LINE L1 5775 5825 -339 502 338 97 14 chr17 49587095 49587373 -39917180 + L3 LINE CR1 1215 1515 -62 4834 138 35 25 chr17 49587737 49588654 -39915899 + L1MB3 LINE L1 5222 6150 -33 2516 66 7 0 chr17 49588654 49588958 -39915595 - AluY SINE Alu -3 308 3 4834 138 35 25 chr17 49588958 49588993 -39915560 + L1MB3 LINE L1 6150 6183 0 514 294 47 17 chr17 49589010 49589245 -39915308 + L1MC4a LINE L1 5583 5824 -297 430 318 45 62 chr17 49589334 49589513 -39915040 - MER5B DNA MER1_type -10 179 2 246 270 27 0 chr17 49589948 49590022 -39914531 + HAL1 LINE L1 6 81 -2426 * 851 313 15 22 chr17 49590006 49590408 -39914145 + HAL1 LINE L1 1158 1556 -951 496 270 52 0 chr17 49590530 49590645 -39913908 - L2 LINE L2 0 3313 3193 267 336 0 0 chr17 49590664 49590771 -39913782 + L1MC4a LINE L1 5793 5899 -1909 2359 101 0 0 chr17 49591061 49591369 -39913184 + AluY SINE Alu 1 308 -3 2444 93 3 0 chr17 49591473 49591784 -39912769 + AluSp SINE Alu 1 312 -1 234 0 0 0 chr17 49592933 49592959 -39911594 + (TG)n Simple_repeat Simple_repeat 2 27 0 201 269 241 0 chr17 49593880 49593988 -39910565 - MIR SINE MIR -4 258 125 2358 92 10 0 chr17 49594371 49594677 -39909876 + AluY SINE Alu 1 309 -2 186 200 0 67 chr17 49594831 49594852 -39909701 - L2 LINE L2 -1 3312 3294 2379 103 0 3 chr17 49594852 49595154 -39909399 + AluSg SINE Alu 1 301 -9 186 200 0 67 chr17 49595154 49595177 -39909376 - L2 LINE L2 -19 3294 3271 720 194 40 80 chr17 49595249 49595450 -39909103 - MER58A DNA MER1_type 0 224 32 505 311 85 53 chr17 49595516 49595928 -39908625 + L2 LINE L2 2596 3014 -299 234 316 61 10 chr17 49595995 49596093 -39908460 + L2 LINE L2 3192 3294 -19 192 339 208 17 chr17 49596553 49596842 -39907711 - L2 LINE L2 -786 2528 2185 2549 67 0 0 chr17 49597099 49597397 -39907156 - AluY SINE Alu -13 298 1 2242 101 0 7 chr17 49597946 49598259 -39906294 - AluSx SINE Alu 0 311 1 1832 103 0 8 chr17 49598435 49598678 -39905875 + AluSg/x SINE Alu 69 309 -3 2846 146 52 17 chr17 49598685 49599225 -39905328 + L1MB4 LINE L1 5621 6179 -1 424 262 48 0 chr17 49599282 49599427 -39905126 + L1MC5 LINE L1 7276 7427 -534 1161 187 10 10 chr17 49599463 49599666 -39904887 + AluJb SINE Alu 1 203 -109 514 154 85 156 chr17 49599789 49599918 -39904635 + L1ME LINE L1 5375 5489 -673 2170 131 3 0 chr17 49599918 49600216 -39904337 - AluSq SINE Alu -14 299 1 514 154 85 156 chr17 49600216 49600298 -39904255 + L1ME LINE L1 5489 5575 -587 360 0 0 0 chr17 49600540 49600580 -39903973 + (CA)n Simple_repeat Simple_repeat 2 41 0 2484 83 0 0 chr17 49601165 49601467 -39903086 + AluY SINE Alu 1 302 -9 1208 171 0 19 chr17 49601468 49601678 -39902875 + AluJo SINE Alu 92 297 -15 204 40 0 0 chr17 49601678 49601703 -39902850 + (GGAGAA)n Simple_repeat Simple_repeat 1 25 0 1895 167 3 0 chr17 49602462 49602750 -39901803 - AluJo SINE Alu -11 301 13 367 269 9 19 chr17 49604862 49604970 -39899583 - MIR SINE MIR -79 129 23 802 232 38 40 chr17 49605526 49605908 -39898645 + MER113 DNA MER1_type? 1 446 -75 1634 178 34 14 chr17 49606130 49606423 -39898130 + AluJb SINE Alu 1 299 -13 436 263 100 39 chr17 49606677 49606884 -39897669 - MIR SINE MIR -27 235 9 615 147 134 19 chr17 49607192 49607207 -39897346 - L1MB7 LINE L1 0 6184 6172 2134 119 3 7 chr17 49607207 49607501 -39897052 + AluSq SINE Alu 1 293 -20 615 147 134 19 chr17 49607501 49607642 -39896911 - L1MB7 LINE L1 -12 6172 6010 1874 134 39 16 chr17 49607695 49608000 -39896553 - AluJb SINE Alu 0 312 1 1769 189 0 19 chr17 49608173 49608485 -39896068 + AluJb SINE Alu 1 306 -6 222 250 19 0 chr17 49608488 49608540 -39896013 + A-rich Low_complexity Low_complexity 2 54 0 2201 90 0 59 chr17 49608548 49608870 -39895683 + AluY SINE Alu 1 303 -8 201 138 0 0 chr17 49608880 49608909 -39895644 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1124 277 92 11 chr17 49609017 49609465 -39895088 - MLT1L LTR MaLR -6 609 126 1927 129 48 27 chr17 49609599 49609894 -39894659 + AluSx SINE Alu 1 301 -11 479 186 88 0 chr17 49610008 49610110 -39894443 - MIR SINE MIR -96 166 56 2177 103 11 0 chr17 49610625 49610934 -39893619 - AluSq SINE Alu 0 312 1 251 313 61 27 chr17 49610963 49611110 -39893443 + L2 LINE L2 3161 3312 -1 2227 112 0 0 chr17 49612128 49612423 -39892130 + AluSx SINE Alu 1 295 -17 213 264 139 42 chr17 49612430 49612574 -39891979 - L2 LINE L2 -153 3160 3003 182 323 65 0 chr17 49612768 49612861 -39891692 - MIR SINE MIR -70 192 94 323 250 56 88 chr17 49612871 49612937 -39891616 - L1MC5 LINE L1 -158 8083 8016 1957 163 0 3 chr17 49612937 49613225 -39891328 + AluSx SINE Alu 1 287 -25 1696 88 0 9 chr17 49613228 49613445 -39891108 + AluSq SINE Alu 68 282 -31 323 250 56 88 chr17 49613445 49613670 -39890883 - L1MC5 LINE L1 -227 8014 1995 245 256 37 37 chr17 49616282 49616364 -39888189 + C-rich Low_complexity Low_complexity 3 84 0 411 21 0 0 chr17 49620161 49620209 -39884344 + (TG)n Simple_repeat Simple_repeat 2 49 0 351 121 0 0 chr17 49620512 49620570 -39883983 + (TG)n Simple_repeat Simple_repeat 1 58 0 234 91 0 0 chr17 49622074 49622107 -39882446 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 290 347 9 10 chr17 49623269 49623372 -39881181 + MIR SINE MIR 13 123 -85 704 256 101 0 chr17 49623641 49623848 -39880705 + MIR SINE MIR 32 259 -3 2137 92 0 7 chr17 49624695 49625005 -39879548 - AluSx SINE Alu 0 308 1 330 289 207 0 chr17 49625613 49625748 -39878805 + MIR3 SINE MIR 29 191 -17 278 245 94 40 chr17 49625806 49625966 -39878587 + MIR SINE MIR 1 164 -65 2390 83 3 3 chr17 49626205 49626518 -39878035 + AluSq SINE Alu 1 313 0 453 257 35 0 chr17 49628322 49628435 -39876118 + MIR3 SINE MIR 86 202 -6 2199 122 3 0 chr17 49629000 49629312 -39875241 - AluSq SINE Alu 0 313 1 187 182 0 0 chr17 49629969 49630002 -39874551 - MIR SINE MIR -113 149 117 2141 113 10 0 chr17 49630004 49630314 -39874239 + AluSp SINE Alu 1 313 0 470 278 53 0 chr17 49630460 49630593 -39873960 - MIR SINE MIR -59 203 64 1221 205 42 12 chr17 49630758 49630907 -39873646 - AluJo SINE Alu -27 285 123 2261 108 0 3 chr17 49630907 49631221 -39873332 - AluSq SINE Alu 0 313 1 1221 205 42 12 chr17 49631221 49631330 -39873223 - AluJo SINE Alu -189 123 19 2183 123 136 45 chr17 49631384 49631824 -39872729 - LTR12 LTR ERV1 -234 480 1 338 279 27 0 chr17 49631943 49632054 -39872499 + MER115 DNA AcHobo 1 114 -579 2276 106 3 0 chr17 49632125 49632436 -39872117 + AluSx SINE Alu 1 312 0 227 273 13 13 chr17 49632743 49632820 -39871733 + MER115 DNA AcHobo 301 377 -316 1888 153 17 0 chr17 49632966 49633260 -39871293 - AluSx SINE Alu -13 299 1 253 222 0 56 chr17 49633266 49633289 -39871264 - L1ME3A LINE L1 -3 6167 6144 4466 179 53 35 chr17 49633289 49633944 -39870609 - MER21B LTR ERV1 -1 862 187 2215 94 7 7 chr17 49633944 49634252 -39870301 + AluSx SINE Alu 1 308 -4 4466 179 53 35 chr17 49634252 49634443 -39870110 - MER21B LTR ERV1 -676 187 1 253 222 0 56 chr17 49634443 49634491 -39870062 - L1ME3A LINE L1 -26 6144 6100 268 289 12 0 chr17 49634494 49634577 -39869976 + Zaphod DNA AcHobo 3905 3988 -43 282 95 0 0 chr17 49634843 49634885 -39869668 + (TTTAA)n Simple_repeat Simple_repeat 3 44 0 2126 108 0 0 chr17 49634886 49635174 -39869379 - AluSx SINE Alu -24 288 1 393 283 209 5 chr17 49635295 49635482 -39869071 + MIR SINE MIR 15 239 -23 214 317 0 0 chr17 49635598 49635658 -39868895 + L2 LINE L2 2992 3051 -221 264 413 36 0 chr17 49635687 49635825 -39868728 + L2 LINE L2 3129 3271 -1 204 328 49 41 chr17 49635963 49636085 -39868468 + L2 LINE L2 3127 3249 -23 2203 89 0 0 chr17 49636102 49636405 -39868148 + AluSx SINE Alu 1 303 0 402 296 38 32 chr17 49636577 49636763 -39867790 + MIR SINE MIR 20 206 -56 2265 119 0 0 chr17 49636765 49637075 -39867478 + AluSx SINE Alu 1 310 -2 2319 100 0 0 chr17 49637444 49637744 -39866809 - AluSc SINE Alu -9 300 1 2104 110 37 0 chr17 49638283 49638583 -39865970 + AluSx SINE Alu 1 311 -1 384 298 24 19 chr17 49638619 49638827 -39865726 - L1ME3A LINE L1 -219 5951 5743 378 304 22 0 chr17 49638859 49638993 -39865560 - L1ME3A LINE L1 -520 5650 5503 466 263 232 11 chr17 49639991 49640181 -39864372 + MIR SINE MIR 2 233 -29 428 271 90 8 chr17 49640211 49640344 -39864209 - MIR SINE MIR 0 262 119 192 152 0 0 chr17 49640598 49640631 -39863922 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 249 98 0 0 chr17 49640630 49640671 -39863882 + (GA)n Simple_repeat Simple_repeat 1 41 0 2195 128 0 0 chr17 49641461 49641773 -39862780 + AluSx SINE Alu 1 312 0 266 343 0 0 chr17 49642032 49642105 -39862448 + MIR3 SINE MIR 117 189 -19 233 260 52 52 chr17 49642469 49642546 -39862007 + L2 LINE L2 3178 3254 -18 1817 158 0 25 chr17 49643210 49643527 -39861026 - AluJo SINE Alu -3 309 1 531 277 158 0 chr17 49643545 49643722 -39860831 + MIR SINE MIR 58 262 0 2095 132 0 0 chr17 49643738 49644033 -39860520 + AluSg SINE Alu 1 295 -15 1892 167 0 0 chr17 49644448 49644747 -39859806 - AluJo SINE Alu -8 304 6 2140 100 33 10 chr17 49645003 49645303 -39859250 + AluSx SINE Alu 1 307 -5 315 280 40 0 chr17 49646084 49646184 -39858369 + MER5B DNA MER1_type 75 178 0 355 297 8 0 chr17 49646846 49646964 -39857589 - L1MC5 LINE L1 -542 7419 7301 313 307 8 47 chr17 49647041 49647168 -39857385 - MER5B DNA MER1_type -39 139 18 239 220 186 0 chr17 49647400 49647459 -39857094 + L2 LINE L2 3198 3267 -5 230 317 96 0 chr17 49648348 49648452 -39856101 + L2 LINE L2 2986 3099 -173 2194 101 0 7 chr17 49648538 49648844 -39855709 - AluSx SINE Alu -8 304 1 605 279 76 6 chr17 49648949 49649121 -39855432 + MIR3 SINE MIR 14 197 -11 1993 152 0 9 chr17 49649275 49649590 -39854963 + AluJo SINE Alu 1 312 0 267 381 0 0 chr17 49650220 49650325 -39854228 + C-rich Low_complexity Low_complexity 3 107 0 2550 39 0 7 chr17 49651440 49651749 -39852804 + AluY SINE Alu 1 307 -4 226 171 24 0 chr17 49652957 49652998 -39851555 + L2 LINE L2 3261 3302 -11 201 333 108 0 chr17 49653016 49653127 -39851426 + L2 LINE L2 3146 3268 -4 396 278 104 29 chr17 49654557 49654731 -39849822 + MIR3 SINE MIR 8 194 -14 1367 170 90 0 chr17 49654784 49655084 -39849469 - L1MB4 LINE L1 -31 6149 5823 282 170 0 0 chr17 49655085 49655138 -39849415 - Alu SINE Alu -3 297 245 1552 171 14 62 chr17 49655145 49655260 -39849293 - L1MB4 LINE L1 -244 5936 5817 1966 118 34 0 chr17 49655260 49655557 -39848996 - AluSx SINE Alu -2 310 4 1552 171 14 62 chr17 49655557 49655718 -39848835 - L1MB4 LINE L1 -363 5817 5680 2210 66 42 3 chr17 49655718 49656005 -39848548 - AluY SINE Alu -11 300 3 1552 171 14 62 chr17 49656005 49656096 -39848457 - L1MB4 LINE L1 -500 5680 5586 2032 139 3 0 chr17 49656457 49656752 -39847801 + AluSg SINE Alu 1 296 -14 459 0 0 0 chr17 49657408 49657459 -39847094 + (TG)n Simple_repeat Simple_repeat 1 51 0 300 351 16 31 chr17 49657589 49657780 -39846773 - L2 LINE L2 -172 3100 2913 456 262 49 0 chr17 49658461 49658583 -39845970 - MIR SINE MIR -107 155 28 786 214 138 11 chr17 49658676 49658892 -39845661 + MIR SINE MIR 21 260 -2 1166 118 0 0 chr17 49659279 49659440 -39845113 - AluSg/x SINE Alu -6 306 146 259 273 15 0 chr17 49659587 49659653 -39844900 + G-rich Low_complexity Low_complexity 4 70 0 530 277 63 63 chr17 49659894 49660132 -39844421 + MIR SINE MIR 11 248 -14 486 275 94 33 chr17 49660333 49660577 -39843976 + MIR SINE MIR 2 260 -2 2565 56 0 0 chr17 49660600 49660906 -39843647 + AluY SINE Alu 1 306 -5 210 293 164 26 chr17 49661236 49661352 -39843201 + MIR SINE MIR 89 220 -42 31 68 0 0 chr17 49664532 49664591 -39839962 + GC_rich Low_complexity Low_complexity 1 59 0 249 33 0 0 chr17 49664604 49664634 -39839919 + (CGGGGG)n Simple_repeat Simple_repeat 5 34 0 22 35 0 0 chr17 49664673 49664702 -39839851 + GC_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr17 49664724 49664747 -39839806 + (CGCGG)n Simple_repeat Simple_repeat 1 23 0 56 61 0 0 chr17 49664777 49664875 -39839678 + GC_rich Low_complexity Low_complexity 1 98 0 33 85 0 0 chr17 49664990 49665072 -39839481 + GC_rich Low_complexity Low_complexity 1 82 0 204 286 17 84 chr17 49666159 49666278 -39838275 + MIR SINE MIR 38 148 -114 379 209 19 38 chr17 49667042 49667147 -39837406 + MIR SINE MIR 47 149 -113 2182 84 37 0 chr17 49667161 49667460 -39837093 - AluSx SINE Alu 0 312 3 2120 89 3 14 chr17 49668419 49668738 -39835815 + AluSx SINE Alu 1 312 0 334 271 159 0 chr17 49668859 49668966 -39835587 + MIR SINE MIR 30 153 -55 225 336 115 10 chr17 49669461 49669565 -39834988 + MIR SINE MIR 22 136 -126 2226 81 7 0 chr17 49670085 49670380 -39834173 - AluSx SINE Alu -15 297 1 285 380 39 0 chr17 49670606 49670735 -39833818 + MIR SINE MIR 94 227 -35 306 275 18 46 chr17 49671192 49671301 -39833252 + MIR SINE MIR 37 142 -66 249 57 0 0 chr17 49672641 49672676 -39831877 + (T)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr17 49673850 49673874 -39830679 + AT_rich Low_complexity Low_complexity 1 24 0 30 0 0 0 chr17 49673902 49673932 -39830621 + AT_rich Low_complexity Low_complexity 1 30 0 2386 102 0 10 chr17 49674873 49675187 -39829366 + AluSx SINE Alu 1 311 -1 2244 108 67 20 chr17 49675468 49675810 -39828743 - MER46B DNA MER2_type 0 236 4 1894 142 16 19 chr17 49675847 49676157 -39828396 - AluJo SINE Alu -3 309 1 1246 168 75 32 chr17 49676242 49676522 -39828031 - AluJo SINE Alu -20 292 1 225 260 10 58 chr17 49676690 49676794 -39827759 + GA-rich Low_complexity Low_complexity 2 100 0 2051 113 10 3 chr17 49677294 49677585 -39826968 - AluSx SINE Alu -19 293 1 2079 118 20 3 chr17 49678495 49678791 -39825762 - AluSx SINE Alu -10 302 2 198 103 0 0 chr17 49682148 49682177 -39822376 + (T)n Simple_repeat Simple_repeat 1 29 0 186 43 0 0 chr17 49682339 49682362 -39822191 + (A)n Simple_repeat Simple_repeat 1 23 0 2307 82 7 7 chr17 49683440 49683744 -39820809 + AluSx SINE Alu 1 304 -8 1885 166 0 0 chr17 49683753 49684057 -39820496 + AluJb SINE Alu 1 304 0 297 250 80 11 chr17 49684060 49684148 -39820405 - L2 LINE L2 -20 3293 3200 354 271 8 45 chr17 49684508 49684641 -39819912 + MIR3 SINE MIR 60 187 -21 1411 118 49 0 chr17 49685945 49686149 -39818404 + MER46A DNA MER2_type 1 214 -22 2135 109 0 0 chr17 49686162 49686438 -39818115 - AluSx SINE Alu -36 276 1 241 162 0 0 chr17 49686438 49686475 -39818078 + MER46A DNA MER2_type 200 236 0 22 35 0 0 chr17 49687262 49687291 -39817262 + AT_rich Low_complexity Low_complexity 1 29 0 4252 237 135 34 chr17 49687307 49688097 -39816456 - HAL1 LINE L1 -93 2414 1706 2162 112 6 19 chr17 49688097 49688409 -39816144 + AluSp SINE Alu 1 308 -5 4252 237 135 34 chr17 49688409 49688938 -39815615 - HAL1 LINE L1 -801 1706 1232 1752 167 3 0 chr17 49688938 49689220 -39815333 + AluJb SINE Alu 10 292 -20 4252 237 135 34 chr17 49689220 49689623 -39814930 - HAL1 LINE L1 -1275 1232 516 329 247 12 139 chr17 49689634 49689800 -39814753 - MIR SINE MIR -70 192 48 324 278 81 81 chr17 49690383 49690631 -39813922 - L2 LINE L2 -126 3146 2899 289 252 32 57 chr17 49692959 49693082 -39811471 + MIR SINE MIR 63 182 -80 475 267 138 51 chr17 49693796 49694129 -39810424 + L2 LINE L2 2950 3311 -2 1966 105 58 0 chr17 49694455 49694749 -39809804 + AluSq SINE Alu 1 311 -2 401 240 50 125 chr17 49695225 49695425 -39809128 - MIR3 SINE MIR -8 200 16 1764 144 0 0 chr17 49695597 49695860 -39808693 + AluSq SINE Alu 49 311 -2 732 147 151 97 chr17 49696434 49696528 -39808025 - ORSL DNA AcHobo 0 275 188 1822 98 0 4 chr17 49696528 49696764 -39807789 + AluSx SINE Alu 18 252 -60 732 147 151 97 chr17 49696764 49696907 -39807646 - ORSL DNA AcHobo -87 188 25 1926 151 0 7 chr17 49696948 49697118 -39807435 - AluJb SINE Alu -7 305 136 2385 92 0 3 chr17 49697118 49697422 -39807131 - AluSx SINE Alu -7 305 3 1926 151 0 7 chr17 49697422 49697556 -39806997 - AluJb SINE Alu -176 136 3 1018 113 0 0 chr17 49697559 49697692 -39806861 - AluJb SINE Alu -179 133 1 1754 178 4 0 chr17 49698278 49698585 -39805968 + AluJb SINE Alu 1 308 0 339 25 0 0 chr17 49698889 49698929 -39805624 + (CA)n Simple_repeat Simple_repeat 2 41 0 549 200 43 0 chr17 49699072 49699187 -39805366 - MER53 DNA DNA -68 121 2 418 286 48 16 chr17 49699187 49699313 -39805240 - MER91A DNA MER1_type -55 141 12 205 286 71 0 chr17 49699320 49699376 -39805177 + L2 LINE L2 3151 3210 -62 514 180 18 9 chr17 49699869 49699980 -39804573 - L1ME4a LINE L1 -1 6120 6009 2116 131 0 3 chr17 49700536 49700827 -39803726 - AluSx SINE Alu -20 292 3 275 263 101 49 chr17 49700854 49701002 -39803551 - MIR SINE MIR -50 212 59 1705 175 27 3 chr17 49701420 49701717 -39802836 - AluJo SINE Alu -8 304 1 3531 168 117 25 chr17 49704984 49705736 -39798817 - L1MB8 LINE L1 -16 6162 5341 767 163 0 39 chr17 49707885 49708014 -39796539 - FLAM_A SINE Alu -9 124 1 22 0 0 0 chr17 49708473 49708495 -39796058 + AT_rich Low_complexity Low_complexity 1 22 0 273 276 17 78 chr17 49709346 49709462 -39795091 - MIR SINE MIR -61 201 93 224 232 283 30 chr17 49711166 49711265 -39793288 + L2 LINE L2 3137 3260 -12 248 359 77 17 chr17 49711398 49711515 -39793038 + L2 LINE L2 3149 3272 0 222 319 172 18 chr17 49711528 49711697 -39792856 - L2 LINE L2 -997 2317 2123 347 335 106 24 chr17 49711706 49711876 -39792677 - L2 LINE L2 0 3272 3089 1072 252 48 51 chr17 49711894 49712247 -39792306 + MLT1I LTR MaLR 52 403 -6 620 325 86 47 chr17 49712247 49712850 -39791703 - L2 LINE L2 -200 3072 2428 439 270 21 129 chr17 49717302 49717628 -39786925 + L1ME4a LINE L1 5382 5672 -449 669 245 69 20 chr17 49717644 49717848 -39786705 - MIR SINE MIR 0 262 49 701 226 42 9 chr17 49717962 49718174 -39786379 - L1MA4 LINE L1 -2 6298 6080 2300 95 0 3 chr17 49718765 49719061 -39785492 - AluSg SINE Alu -15 295 1 2110 153 90 12 chr17 49719062 49719473 -39785080 - L1MA4 LINE L1 -189 6111 5669 386 242 141 66 chr17 49719473 49719729 -39784824 + L1ME4a LINE L1 5708 5982 -139 2496 64 0 3 chr17 49719935 49720231 -39784322 + AluY SINE Alu 1 295 -16 21 0 0 0 chr17 49720546 49720567 -39783986 + AT_rich Low_complexity Low_complexity 1 21 0 219 241 86 0 chr17 49721876 49721934 -39782619 + MIR3 SINE MIR 142 204 -4 221 269 0 0 chr17 49722416 49722468 -39782085 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 1709 323 107 21 chr17 49723114 49724108 -39780445 + L2 LINE L2 1451 2529 -785 478 297 14 7 chr17 49724086 49724234 -39780319 + MIR SINE MIR 106 254 -8 * 575 310 93 42 chr17 49724263 49724802 -39779751 + L2 LINE L2 2511 3125 -147 317 341 156 33 chr17 49724820 49725096 -39779457 + L2 LINE L2 2959 3268 -4 2328 86 0 10 chr17 49726698 49726999 -39777554 + AluSx SINE Alu 1 298 -14 2306 99 0 0 chr17 49727370 49727663 -39776890 + AluSc SINE Alu 1 293 -16 243 0 0 0 chr17 49727663 49727690 -39776863 + (TA)n Simple_repeat Simple_repeat 1 27 0 2163 119 7 7 chr17 49727701 49728003 -39776550 + AluSx SINE Alu 1 302 -10 4480 158 21 19 chr17 49728012 49728443 -39776110 + L1MB3 LINE L1 5364 5799 -384 2179 120 3 3 chr17 49728443 49728743 -39775810 - AluSx SINE Alu -12 300 1 4480 158 21 19 chr17 49728743 49729121 -39775432 + L1MB3 LINE L1 5799 6175 -8 324 275 148 13 chr17 49729138 49729342 -39775211 + L1ME3A LINE L1 5263 5438 -732 2392 100 0 0 chr17 49729342 49729651 -39774902 + AluSx SINE Alu 1 309 -3 324 275 148 13 chr17 49729651 49729961 -39774592 + L1ME3A LINE L1 5438 5855 -315 3448 112 42 27 chr17 49729961 49730061 -39774492 - MER1A DNA MER1_type -2173 527 430 2407 88 0 0 chr17 49730061 49730355 -39774198 - AluSg SINE Alu -16 294 1 3448 112 42 27 chr17 49730355 49730773 -39773780 - MER1A DNA MER1_type -2270 430 1 324 275 148 13 chr17 49730773 49730833 -39773720 + L1ME3A LINE L1 5855 5906 -264 543 338 97 14 chr17 49731216 49731494 -39773059 + L3 LINE CR1 1215 1515 -62 5009 135 37 17 chr17 49731858 49732774 -39771779 + L1MB3 LINE L1 5222 6154 -29 2494 65 7 0 chr17 49732783 49733090 -39771463 - AluY SINE Alu 0 311 3 543 326 36 14 chr17 49733142 49733363 -39771190 + L1MC4a LINE L1 5583 5808 -2000 408 318 45 62 chr17 49733466 49733645 -39770908 - MER5B DNA MER1_type -10 179 2 254 270 27 0 chr17 49734080 49734154 -39770399 + HAL1 LINE L1 6 81 -2426 * 868 313 15 22 chr17 49734138 49734540 -39770013 + HAL1 LINE L1 1158 1556 -951 504 270 52 0 chr17 49734662 49734777 -39769776 - L2 LINE L2 0 3313 3193 281 336 0 0 chr17 49734796 49734903 -39769650 + L1MC4a LINE L1 5793 5899 -1909 2291 101 0 0 chr17 49735193 49735501 -39769052 + AluY SINE Alu 1 308 -3 2374 93 3 0 chr17 49735605 49735916 -39768637 + AluSp SINE Alu 1 312 -1 216 0 0 0 chr17 49737065 49737089 -39767464 + (TG)n Simple_repeat Simple_repeat 2 25 0 206 241 241 0 chr17 49738010 49738118 -39766435 - MIR SINE MIR -4 258 125 2310 88 10 0 chr17 49738501 49738807 -39765746 + AluY SINE Alu 1 309 -2 2296 103 0 3 chr17 49738982 49739282 -39765271 + AluSg SINE Alu 1 299 -11 763 192 39 87 chr17 49739380 49739588 -39764965 - MER58A DNA MER1_type 0 224 27 498 311 84 54 chr17 49739647 49740053 -39764500 + L2 LINE L2 2596 3006 -307 218 293 73 12 chr17 49740142 49740224 -39764329 + L2 LINE L2 3208 3294 -19 252 386 119 9 chr17 49740684 49740894 -39763659 - L2 LINE L2 -786 2528 2296 189 351 149 22 chr17 49741040 49741174 -39763379 + L2 LINE L2 3117 3267 -5 2483 67 0 0 chr17 49741230 49741527 -39763026 - AluY SINE Alu -14 297 1 2156 108 0 7 chr17 49742076 49742389 -39762164 - AluSx SINE Alu 0 311 1 2301 92 0 0 chr17 49744439 49744733 -39759820 + AluSx SINE Alu 1 294 -18 2129 121 0 0 chr17 49744878 49745179 -39759374 - AluSx SINE Alu 0 301 1 818 206 40 54 chr17 49745279 49745502 -39759051 + AluJo SINE Alu 1 220 -92 22 0 0 0 chr17 49745700 49745722 -39758831 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 49745849 49745869 -39758684 + (TA)n Simple_repeat Simple_repeat 2 21 0 2405 46 3 30 chr17 49745869 49746173 -39758380 - AluY SINE Alu -15 296 1 516 271 55 107 chr17 49746177 49746318 -39758235 - L1ME4a LINE L1 -296 5825 5678 1974 148 3 7 chr17 49746318 49746623 -39757930 - AluJo SINE Alu -8 304 1 516 271 55 107 chr17 49746623 49746938 -39757615 - L1ME4a LINE L1 -443 5678 5393 1980 120 18 0 chr17 49747149 49747433 -39757120 - AluSx SINE Alu -23 289 1 234 269 0 0 chr17 49747864 49747931 -39756622 - L1ME4a LINE L1 -1443 4703 4637 21 0 0 0 chr17 49747958 49747979 -39756574 + AT_rich Low_complexity Low_complexity 1 21 0 443 272 108 87 chr17 49747999 49748134 -39756419 - L1ME4a LINE L1 -1544 4602 4471 923 144 0 0 chr17 49748134 49748266 -39756287 - FLAM_C SINE Alu 0 133 2 443 272 108 87 chr17 49748266 49748557 -39755996 - L1ME4a LINE L1 -1675 4471 4167 26 30 0 0 chr17 49749474 49749507 -39755046 + AT_rich Low_complexity Low_complexity 1 33 0 1713 226 43 14 chr17 49749536 49749956 -39754597 + L1ME1 LINE L1 5694 6125 -41 1261 144 204 26 chr17 49751358 49751671 -39752882 + Looper DNA T2_type 2 370 -1188 2013 86 86 0 chr17 49751671 49751972 -39752581 - L1P LINE L1 -1057 5089 4763 4029 54 65 2 chr17 49751974 49752513 -39752040 + L1PA7 LINE L1 5575 6147 -7 4037 183 51 36 chr17 49752530 49753467 -39751086 + Looper DNA T2_type 395 1345 -213 403 123 0 0 chr17 49753467 49753524 -39751029 + Tigger4(Zombi) DNA MER2_type 1 57 -2674 1929 145 0 7 chr17 49753581 49753871 -39750682 + AluJo SINE Alu 1 288 -24 3033 126 19 2 chr17 49753893 49754370 -39750183 + Tigger4(Zombi) DNA MER2_type 2197 2681 -50 699 196 72 5 chr17 49754372 49754566 -39749987 + Looper DNA T2_type 1351 1557 -1 1804 166 10 0 chr17 49754995 49755285 -39749268 - AluJb SINE Alu -18 294 2 903 274 121 50 chr17 49755312 49756622 -39747931 - L1ME LINE L1 -397 5750 4339 1686 111 0 8 chr17 49756787 49757021 -39747532 - AluSq SINE Alu -13 300 69 21 0 0 0 chr17 49757142 49757163 -39747390 + AT_rich Low_complexity Low_complexity 1 21 0 597 251 56 80 chr17 49757164 49757597 -39746956 - L1ME3A LINE L1 -2 6160 5756 * 911 294 89 28 chr17 49757590 49758482 -39746071 - L1MEd LINE L1 -4780 1530 552 511 312 61 29 chr17 49758897 49759442 -39745111 - L1MEd LINE L1 -4585 1725 1164 487 194 44 50 chr17 49759453 49759613 -39744940 - L1MEd LINE L1 -5044 1075 917 943 214 0 0 chr17 49759691 49759859 -39744694 - FRAM SINE Alu -16 160 1 481 271 86 115 chr17 49759864 49759965 -39744588 - L1MEd LINE L1 -5562 557 455 2348 94 3 0 chr17 49759965 49760272 -39744281 + AluSp SINE Alu 1 308 -5 481 271 86 115 chr17 49760272 49760742 -39743811 - L1MEd LINE L1 -5664 455 3 213 39 0 0 chr17 49760833 49760859 -39743694 + (TG)n Simple_repeat Simple_repeat 2 27 0 269 178 0 0 chr17 49760916 49760961 -39743592 + MLT2D LTR ERVL 316 360 -54 1165 243 116 32 chr17 49760970 49761348 -39743205 - MLT2B2 LTR ERVL -96 419 10 412 195 11 11 chr17 49762393 49762480 -39742073 + FLAM_A SINE Alu 44 130 -3 26 0 0 0 chr17 49762503 49762529 -39742024 + AT_rich Low_complexity Low_complexity 1 26 0 360 0 0 0 chr17 49762542 49762582 -39741971 + (CA)n Simple_repeat Simple_repeat 2 41 0 1328 151 24 0 chr17 49762583 49762795 -39741758 + L1PB3 LINE L1 5792 6008 -146 1009 154 6 18 chr17 49762830 49762999 -39741554 + L1PB3 LINE L1 5981 6147 -7 258 327 83 43 chr17 49763992 49764246 -39740307 + L2 LINE L2 1171 1434 -1880 195 339 68 34 chr17 49764328 49764446 -39740107 + L2 LINE L2 3096 3217 -55 383 364 24 77 chr17 49765107 49765563 -39738990 - L2 LINE L2 -5 3267 2836 182 258 0 32 chr17 49766445 49766507 -39738046 - L2 LINE L2 -832 2482 2423 183 274 132 19 chr17 49766706 49766812 -39737741 - L2 LINE L2 -1294 2020 1903 893 173 26 6 chr17 49767674 49767830 -39736723 - FRAM SINE Alu -23 153 1 1771 263 78 54 chr17 49768111 49768883 -39735670 - L2 LINE L2 -1850 1464 675 495 249 362 0 chr17 49769154 49769339 -39735214 + MIR SINE MIR 9 260 -2 1688 170 14 5 chr17 49769722 49770149 -39734404 + L1MA4A LINE L1 5788 6279 -24 27 62 0 0 chr17 49771486 49771534 -39733019 + AT_rich Low_complexity Low_complexity 1 48 0 2102 98 44 0 chr17 49771534 49771809 -39732744 - AluSx SINE Alu -23 289 3 1993 112 10 10 chr17 49772014 49772308 -39732245 - AluJb SINE Alu -18 294 1 491 316 88 6 chr17 49773102 49773273 -39731280 - MER5A DNA MER1_type -1 188 4 1201 321 108 24 chr17 49773429 49774049 -39730504 + L3 LINE CR1 790 1461 -116 1126 157 16 0 chr17 49774109 49774294 -39730259 + AluSx SINE Alu 25 212 -100 426 73 0 0 chr17 49774294 49774349 -39730204 + AluSg/x SINE Alu 76 130 -180 2164 111 0 14 chr17 49774349 49774481 -39730072 + AluSx SINE Alu 1 133 -179 2364 67 0 0 chr17 49774481 49774794 -39729759 + AluY SINE Alu 1 313 0 2164 111 0 14 chr17 49774794 49774988 -39729565 + AluSx SINE Alu 133 312 0 311 266 38 0 chr17 49774988 49775067 -39729486 + L3 LINE CR1 1492 1573 -4 611 150 87 82 chr17 49775513 49775720 -39728833 - MER109 Unknown Unknown -1240 1192 985 349 205 0 48 chr17 49775720 49775803 -39728750 + Tigger5 DNA MER2_type 1 79 -2244 342 200 13 0 chr17 49775803 49775878 -39728675 - Tigger5 DNA MER2_type -3 2320 2245 * 373 153 0 0 chr17 49775871 49775930 -39728623 + Tigger5 DNA MER2_type 2242 2300 -23 1329 184 144 84 chr17 49775945 49776537 -39728016 - MER109 Unknown Unknown -1446 986 360 572 278 113 25 chr17 49776540 49777090 -39727463 - MER109 Unknown Unknown -1770 662 60 225 213 241 14 chr17 49777478 49777619 -39726934 + L1ME4a LINE L1 5947 6119 -2 430 250 14 65 chr17 49777703 49777903 -39726650 - MIR SINE MIR -31 231 39 209 216 54 95 chr17 49777987 49778028 -39726525 + MER5A DNA MER1_type 119 157 -32 1904 132 61 0 chr17 49778028 49778308 -39726245 + AluSx SINE Alu 1 297 -15 209 216 54 95 chr17 49778308 49778340 -39726213 + MER5A DNA MER1_type 157 189 0 216 130 0 0 chr17 49778371 49778417 -39726136 + (A)n Simple_repeat Simple_repeat 1 46 0 211 289 0 19 chr17 49778521 49778573 -39725980 - L2 LINE L2 -9 3263 3213 277 299 205 8 chr17 49778866 49778983 -39725570 - MIR3 SINE MIR -49 159 20 461 284 55 15 chr17 49779076 49779277 -39725276 + L1ME4a LINE L1 5567 5775 -346 227 253 60 47 chr17 49779404 49779554 -39724999 + L1ME4a LINE L1 5951 6102 -19 263 313 119 45 chr17 49779834 49779968 -39724585 + MIR3 SINE MIR 2 145 -63 1459 162 112 0 chr17 49782460 49782577 -39721976 + AluJo SINE Alu 1 104 -208 462 18 0 0 chr17 49782577 49782632 -39721921 + (CA)n Simple_repeat Simple_repeat 2 56 0 1459 162 112 0 chr17 49782632 49782773 -39721780 + AluJo SINE Alu 104 288 -24 183 200 17 117 chr17 49783395 49783455 -39721098 + L2 LINE L2 3142 3195 -77 1414 319 106 50 chr17 49783488 49784701 -39719852 - L2 LINE L2 -18 3254 1972 440 218 400 27 chr17 49785131 49785356 -39719197 - MER5C DNA MER1_type 0 324 16 691 165 38 8 chr17 49785493 49785626 -39718927 + MER20 DNA MER1_type 83 219 0 22 35 0 0 chr17 49786114 49786143 -39718410 + AT_rich Low_complexity Low_complexity 1 29 0 306 167 0 42 chr17 49786351 49786423 -39718130 + MER20 DNA MER1_type 141 209 -10 905 247 34 17 chr17 49786529 49786764 -39717789 + MIR SINE MIR 3 241 -21 48 0 0 0 chr17 49787427 49787475 -39717078 + AT_rich Low_complexity Low_complexity 1 48 0 826 155 0 0 chr17 49787475 49787591 -39716962 - FLAM_C SINE Alu -17 116 1 2555 55 3 0 chr17 49789831 49790141 -39714412 - AluY SINE Alu 0 311 1 25 31 0 0 chr17 49790795 49790827 -39713726 + AT_rich Low_complexity Low_complexity 1 32 0 741 114 30 0 chr17 49794042 49794173 -39710380 + L1MA6 LINE L1 6165 6299 -1 315 239 174 0 chr17 49794468 49794577 -39709976 + L1ME4a LINE L1 5782 5909 -212 31 0 0 0 chr17 49794620 49794651 -39709902 + AT_rich Low_complexity Low_complexity 1 31 0 1381 175 89 22 chr17 49795005 49795365 -39709188 + L1MD3 LINE L1 7602 7985 -10 350 178 133 0 chr17 49795367 49795457 -39709096 + Charlie5 DNA MER1_type 2484 2585 -27 429 278 75 35 chr17 49796659 49796832 -39707721 - MIR SINE MIR -71 191 12 256 329 12 0 chr17 49796881 49796966 -39707587 - L2 LINE L2 -2 3270 3185 538 229 21 36 chr17 49797338 49797478 -39707075 + L2 LINE L2 3172 3309 -4 245 329 38 0 chr17 49797477 49797556 -39706997 + MIR SINE MIR 54 135 -73 * 960 80 64 0 chr17 49797556 49797681 -39706872 + AluSq/x SINE Alu 1 133 -179 2050 156 3 0 chr17 49797687 49797995 -39706558 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 49797995 49798018 -39706535 + AT_rich Low_complexity Low_complexity 1 23 0 208 284 30 15 chr17 49798018 49798085 -39706468 + MIR3 SINE MIR 126 193 -15 1701 162 53 7 chr17 49798174 49798458 -39706095 - AluJb SINE Alu -15 297 1 2475 53 0 3 chr17 49799210 49799513 -39705040 + AluY SINE Alu 1 302 -9 447 52 0 0 chr17 49800534 49800592 -39703961 + (CA)n Simple_repeat Simple_repeat 1 58 0 227 316 41 20 chr17 49801515 49801613 -39702940 + MIR3 SINE MIR 96 195 -13 2204 120 0 0 chr17 49801677 49801969 -39702584 - AluSx SINE Alu -20 292 1 2440 69 7 3 chr17 49802199 49802503 -39702050 + AluSp SINE Alu 1 305 -8 596 251 59 11 chr17 49802620 49802807 -39701746 + L1ME LINE L1 5618 5813 -349 407 152 39 3 chr17 49802827 49803061 -39701492 + AluJb SINE Alu 1 312 0 2118 114 7 3 chr17 49803097 49803386 -39701167 + AluSq SINE Alu 1 290 -23 2160 133 0 0 chr17 49803581 49803882 -39700671 + AluSx SINE Alu 1 301 -11 2180 100 0 0 chr17 49804884 49805186 -39699367 + AluSc SINE Alu 1 302 0 405 0 0 0 chr17 49805263 49805308 -39699245 + (TG)n Simple_repeat Simple_repeat 2 46 0 394 165 121 22 chr17 49805348 49805439 -39699114 + L1MC4 LINE L1 7920 8019 -23 1818 192 70 25 chr17 49806072 49806515 -39698038 + MLT1C LTR MaLR 1 463 -4 2506 121 6 6 chr17 49807299 49807663 -39696890 + THE1B LTR MaLR 1 364 0 382 240 10 20 chr17 49807671 49807771 -39696782 + MIR SINE MIR 141 239 -23 21 0 0 0 chr17 49807777 49807798 -39696755 + AT_rich Low_complexity Low_complexity 1 21 0 1366 156 52 85 chr17 49808027 49808334 -39696219 - AluJo SINE Alu -11 301 5 735 153 0 0 chr17 49808343 49808461 -39696092 - AluJb SINE Alu -5 307 190 1815 93 8 0 chr17 49808638 49808884 -39695669 + AluSq SINE Alu 1 248 -65 673 182 0 0 chr17 49808884 49808994 -39695559 - MER2 DNA MER2_type -232 113 4 2182 108 10 7 chr17 49809153 49809459 -39695094 + AluSx SINE Alu 1 307 -5 2267 80 10 3 chr17 49809459 49809747 -39694806 + AluSc SINE Alu 8 297 -12 475 268 164 11 chr17 49810199 49810382 -39694171 - MIR SINE MIR -18 244 34 800 221 37 43 chr17 49810491 49810786 -39693767 + L1MC5 LINE L1 6958 7250 -733 497 172 104 49 chr17 49810859 49811022 -39693531 + L1MB3 LINE L1 5970 6141 -42 662 238 0 0 chr17 49811025 49811147 -39693406 + FLAM_A SINE Alu 1 122 -11 679 174 34 119 chr17 49811317 49811475 -39693078 - L1M4 LINE L1 -702 5482 5312 1852 156 3 20 chr17 49811475 49811777 -39692776 - AluJo SINE Alu -15 297 1 679 174 34 119 chr17 49811777 49811838 -39692715 - L1M4 LINE L1 -872 5312 5247 2443 74 3 0 chr17 49811838 49812148 -39692405 - AluY SINE Alu 0 311 1 1767 147 7 49 chr17 49812150 49812456 -39692097 - AluJo SINE Alu -19 293 1 679 174 34 119 chr17 49812456 49812678 -39691875 - L1M4 LINE L1 -938 5246 5073 805 141 141 6 chr17 49812686 49812856 -39691697 - MER58B DNA MER1_type -10 331 139 2256 144 38 69 chr17 49813021 49813542 -39691011 - L1MA4 LINE L1 -27 6273 5769 702 178 8 23 chr17 49813550 49813679 -39690874 - FLAM_C SINE Alu -2 131 5 2300 117 0 0 chr17 49813688 49813996 -39690557 - AluSx SINE Alu -4 308 1 1791 247 35 10 chr17 49814019 49814622 -39689931 - L1MDa LINE L1 -3170 3370 2753 2136 132 3 0 chr17 49814633 49814937 -39689616 + AluSx SINE Alu 1 305 -7 2064 144 0 0 chr17 49814945 49815244 -39689309 + AluSx SINE Alu 1 299 -13 439 225 107 52 chr17 49815296 49815388 -39689165 - L1MDa LINE L1 -3964 2576 2491 765 178 0 0 chr17 49815388 49815506 -39689047 - FLAM_C SINE Alu -15 118 1 439 225 107 52 chr17 49815506 49815897 -39688656 - L1MDa LINE L1 -4049 2491 2223 201 175 0 0 chr17 49815897 49815937 -39688616 + (TATG)n Simple_repeat Simple_repeat 3 42 0 298 268 24 16 chr17 49815945 49816072 -39688481 + (TA)n Simple_repeat Simple_repeat 2 129 0 2287 95 0 0 chr17 49816249 49816534 -39688019 - AluSc SINE Alu -24 285 1 292 293 13 0 chr17 49816537 49816612 -39687941 + L2 LINE L2 2221 2296 -1018 749 218 80 64 chr17 49816840 49817232 -39687321 + L1MDa LINE L1 1705 2087 -4339 431 252 0 9 chr17 49817233 49817340 -39687213 + MIR SINE MIR 141 246 -16 2250 105 10 0 chr17 49817340 49817644 -39686909 + AluSx SINE Alu 1 307 -5 187 262 0 0 chr17 49818020 49818062 -39686491 - L2 LINE L2 -239 3033 2992 382 227 142 35 chr17 49818670 49818811 -39685742 - MER5B DNA MER1_type 0 178 23 311 240 230 0 chr17 49818852 49818952 -39685601 - MER5A DNA MER1_type -6 183 61 330 125 156 0 chr17 49819142 49819206 -39685347 + MER5A DNA MER1_type 2 75 -114 1121 97 7 19 chr17 49819207 49819362 -39685191 + AluSq SINE Alu 1 153 -160 590 181 69 9 chr17 49819374 49819490 -39685063 - FLAM_A SINE Alu -10 123 1 1912 113 22 4 chr17 49819502 49819776 -39684777 - AluSx SINE Alu -25 287 9 2069 123 31 0 chr17 49820616 49820909 -39683644 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 49821029 49821050 -39683503 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 2425 61 0 0 chr17 49821239 49821534 -39683019 + AluY SINE Alu 2 296 -15 300 297 52 58 chr17 49821624 49821779 -39682774 - L2 LINE L2 0 3313 3160 294 168 0 28 chr17 49823149 49823256 -39681297 + (TTAA)n Simple_repeat Simple_repeat 1 104 0 2339 78 0 0 chr17 49823256 49823539 -39681014 - AluSc SINE Alu -26 283 1 311 95 0 0 chr17 49823660 49823702 -39680851 + 5S rRNA rRNA 1 42 -79 1659 189 17 0 chr17 49823764 49824060 -39680493 - AluJo SINE Alu -1 311 11 2161 129 0 0 chr17 49824115 49824409 -39680144 - AluSg SINE Alu -16 294 1 1620 135 92 39 chr17 49824632 49824913 -39679640 - AluSx SINE Alu -16 296 1 1878 134 36 0 chr17 49824915 49825192 -39679361 - AluSx SINE Alu -25 287 1 255 308 70 6 chr17 49826026 49826182 -39678371 + MIR SINE MIR 97 262 0 1607 182 45 0 chr17 49827109 49827400 -39677153 + AluJo SINE Alu 1 304 -8 1753 94 144 0 chr17 49827676 49827932 -39676621 + AluSp SINE Alu 1 293 -10 2292 120 0 0 chr17 49827934 49828242 -39676311 + AluSg SINE Alu 1 308 -2 440 225 56 0 chr17 49828718 49828807 -39675746 + Tigger3(Golem) DNA MER2_type 1 94 -2935 * 1463 156 60 46 chr17 49828801 49828828 -39675725 + Tigger3(Golem) DNA MER2_type 2723 2748 -280 2370 115 0 3 chr17 49828828 49829141 -39675412 - AluSx SINE Alu 0 312 1 1463 156 60 46 chr17 49829141 49829415 -39675138 + Tigger3(Golem) DNA MER2_type 2748 3028 0 26 30 0 0 chr17 49829601 49829634 -39674919 + AT_rich Low_complexity Low_complexity 1 33 0 2091 120 7 0 chr17 49829767 49830071 -39674482 - AluSq SINE Alu 0 306 1 246 62 0 0 chr17 49830756 49830788 -39673765 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 792 228 66 0 chr17 49833964 49834175 -39670378 + MIR SINE MIR 13 237 -25 2479 64 0 10 chr17 49834326 49834621 -39669932 + AluY SINE Alu 1 292 -19 194 268 71 63 chr17 49834887 49835014 -39669539 - L2 LINE L2 -472 2842 2715 1938 162 3 3 chr17 49835988 49836297 -39668256 - AluJb SINE Alu -3 309 1 984 321 99 12 chr17 49836482 49837080 -39667473 - L1MC4a LINE L1 -1875 5933 5284 998 177 43 0 chr17 49837238 49837402 -39667151 + AluSq SINE Alu 4 174 -139 2955 157 26 26 chr17 49837502 49837691 -39666862 + L1MB3 LINE L1 5608 5796 -387 1858 161 3 10 chr17 49837691 49837995 -39666558 - AluSx SINE Alu -10 302 1 2955 157 26 26 chr17 49837995 49838379 -39666174 + L1MB3 LINE L1 5795 6181 -2 313 270 102 0 chr17 49838390 49838527 -39666026 + L1M LINE L1 5263 5413 -767 2595 66 0 0 chr17 49838653 49838958 -39665595 - AluY SINE Alu -6 305 1 978 222 88 48 chr17 49839048 49839400 -39665153 + MLT1B LTR MaLR 21 386 -4 319 234 0 0 chr17 49839409 49839486 -39665067 - L1MC4a LINE L1 -991 5155 5079 533 188 10 0 chr17 49839650 49839746 -39664807 + Charlie5 DNA MER1_type 1 97 -2515 563 309 68 8 chr17 49839759 49840125 -39664428 - L1MC4a LINE L1 -3557 2589 2202 1766 138 28 25 chr17 49840147 49840453 -39664100 - AluSx SINE Alu 0 307 1 283 298 0 11 chr17 49840647 49840741 -39663812 - Charlie7 DNA MER1_type -1893 719 627 2224 100 0 3 chr17 49840747 49841036 -39663517 + AluY SINE Alu 1 288 -23 288 0 0 0 chr17 49841039 49841071 -39663482 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1818 113 47 4 chr17 49841076 49841351 -39663202 + AluSx SINE Alu 1 287 -25 329 252 0 58 chr17 49841380 49841483 -39663070 - Charlie7 DNA MER1_type -2510 102 6 2513 77 0 0 chr17 49841612 49841910 -39662643 + AluY SINE Alu 1 298 -13 1464 189 77 7 chr17 49842080 49842365 -39662188 + AluJb SINE Alu 1 305 -7 1800 134 0 18 chr17 49842513 49842790 -39661763 - AluSx SINE Alu -22 290 19 355 223 46 51 chr17 49842811 49842986 -39661567 + L1MC5 LINE L1 7591 7764 -197 325 222 0 25 chr17 49842999 49843080 -39661473 + L1MC5 LINE L1 7835 7913 -48 2420 82 3 9 chr17 49843453 49843794 -39660759 + AluSp SINE Alu 1 313 0 344 195 85 0 chr17 49843797 49843879 -39660674 - MER2 DNA MER2_type -135 210 122 2198 120 0 0 chr17 49843879 49844171 -39660382 + AluSx SINE Alu 1 292 -20 1327 193 61 24 chr17 49844575 49844871 -39659682 + AluJo SINE Alu 5 311 -1 23 33 0 0 chr17 49845608 49845638 -39658915 + AT_rich Low_complexity Low_complexity 1 30 0 754 194 0 8 chr17 49845840 49845974 -39658579 - FLAM_A SINE Alu 0 133 1 2066 151 7 0 chr17 49846559 49846864 -39657689 - AluSx SINE Alu -5 307 1 561 239 159 22 chr17 49846911 49847137 -39657416 - MIR SINE MIR -1 261 5 258 271 159 19 chr17 49847595 49847702 -39656851 + MLT1K LTR MaLR 3 124 -464 333 214 162 17 chr17 49847884 49848001 -39656552 + MLT1K LTR MaLR 453 586 -2 2134 97 0 88 chr17 49848389 49848718 -39655835 - AluSp SINE Alu -13 300 1 532 282 103 61 chr17 49848769 49849122 -39655431 - L1MEd LINE L1 -4573 1737 1400 2363 82 14 0 chr17 49849122 49849416 -39655137 - AluSp SINE Alu -15 298 1 532 282 103 61 chr17 49849416 49850588 -39653965 - L1MEd LINE L1 -4910 1400 77 1776 169 0 17 chr17 49850588 49850884 -39653669 + AluJo SINE Alu 2 292 -20 532 282 103 61 chr17 49850884 49850954 -39653599 - L1MEd LINE L1 -6233 77 11 834 235 27 0 chr17 49851133 49851316 -39653237 - MER5A DNA MER1_type -1 188 1 1928 113 34 4 chr17 49852418 49852684 -39651869 - AluSx SINE Alu -38 274 1 716 267 119 32 chr17 49852699 49853575 -39650978 + L1MC4a LINE L1 4613 5562 -604 1756 154 111 3 chr17 49853660 49853966 -39650587 - MER7A DNA MER2_type 0 346 10 265 281 95 36 chr17 49854006 49854227 -39650326 + L1MC4a LINE L1 5724 5959 -203 1395 180 28 62 chr17 49854329 49854651 -39649902 + AluJo SINE Alu 2 312 0 2224 94 30 0 chr17 49854693 49854992 -39649561 - AluSp SINE Alu -5 308 1 2341 110 0 0 chr17 49856487 49856797 -39647756 + AluSx SINE Alu 1 310 -2 4666 169 74 9 chr17 49856815 49858796 -39645757 + L1MA4A LINE L1 3915 6052 -251 2269 111 0 3 chr17 49858796 49859093 -39645460 + AluSg SINE Alu 1 296 -14 4666 169 74 9 chr17 49859093 49859155 -39645398 + L1MA4A LINE L1 6052 6109 -194 426 123 14 0 chr17 49859168 49859241 -39645312 + L1MA4A LINE L1 6207 6280 -23 422 250 76 8 chr17 49859469 49859601 -39644952 + MIR SINE MIR 39 179 -83 1367 306 121 34 chr17 49859605 49860484 -39644069 + L3 LINE CR1 515 1469 -108 287 307 125 64 chr17 49860764 49861084 -39643469 - L2 LINE L2 -337 2977 2621 2178 94 0 0 chr17 49861084 49861360 -39643193 + AluSq SINE Alu 27 302 -11 287 307 125 64 chr17 49861360 49861479 -39643074 - L2 LINE L2 -693 2621 2511 2327 124 22 14 chr17 49861758 49862120 -39642433 + MER47A DNA MER2_type 1 365 -1 716 317 151 22 chr17 49862182 49862731 -39641822 - L2 LINE L2 -1008 2306 1687 201 273 0 0 chr17 49862822 49862866 -39641687 + L3 LINE CR1 1527 1570 -7 201 98 24 24 chr17 49863860 49863901 -39640652 + (CCCCCG)n Simple_repeat Simple_repeat 6 46 0 21 36 0 0 chr17 49863967 49863995 -39640558 + GC_rich Low_complexity Low_complexity 1 28 0 28 61 0 0 chr17 49864469 49864518 -39640035 + AT_rich Low_complexity Low_complexity 1 49 0 2026 92 89 0 chr17 49864965 49865246 -39639307 + AluSx SINE Alu 1 306 -6 2180 121 0 0 chr17 49865518 49865823 -39638730 - AluSx SINE Alu -7 305 1 1922 191 29 29 chr17 49867187 49867601 -39636952 + MLT2D LTR ERVL 1 414 0 261 0 0 0 chr17 49868177 49868206 -39636347 + (TG)n Simple_repeat Simple_repeat 1 29 0 2045 117 10 48 chr17 49869253 49869562 -39634991 - AluSx SINE Alu -15 297 1 1793 176 0 23 chr17 49870260 49870566 -39633987 - AluJb SINE Alu -11 301 3 286 129 32 0 chr17 49870579 49870641 -39633912 + (TA)n Simple_repeat Simple_repeat 2 65 0 2201 88 145 93 chr17 49870703 49870993 -39633560 + MER4C LTR ERV1 1 274 -191 2214 92 0 3 chr17 49870993 49871277 -39633276 + AluSg SINE Alu 2 284 -26 243 0 0 0 chr17 49871282 49871309 -39633244 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2201 88 145 93 chr17 49871309 49871324 -39633229 + MER4C LTR ERV1 277 290 -175 2254 110 0 3 chr17 49871324 49871624 -39632929 + AluSx SINE Alu 1 299 -13 2201 88 145 93 chr17 49871624 49871753 -39632800 + MER4C LTR ERV1 290 465 0 1071 90 0 39 chr17 49872082 49872256 -39632297 - AluSg/x SINE Alu 0 312 140 2290 105 3 13 chr17 49872438 49872752 -39631801 - AluSx SINE Alu -1 311 1 215 331 69 14 chr17 49873284 49873429 -39631124 + L2 LINE L2 2560 2712 -602 2338 103 0 0 chr17 49873873 49874175 -39630378 - AluY SINE Alu -9 302 1 1493 188 39 30 chr17 49874175 49874222 -39630331 - L1MB7 LINE L1 -24 6396 6351 1621 178 0 50 chr17 49874222 49874543 -39630010 - AluJo SINE Alu -7 305 1 1493 188 39 30 chr17 49874543 49874830 -39629723 - L1MB7 LINE L1 -69 6351 6059 716 199 29 0 chr17 49874830 49874966 -39629587 - FLAM_C SINE Alu -3 140 1 5685 183 42 30 chr17 49874967 49876754 -39627799 - L1MB7 LINE L1 -357 6063 4251 193 242 61 45 chr17 49877307 49877373 -39627180 - L2 LINE L2 -52 3220 3154 301 298 13 25 chr17 49877835 49877976 -39626577 + GA-rich Low_complexity Low_complexity 1 139 0 301 246 73 0 chr17 49878487 49878602 -39625951 + MIR3 SINE MIR 93 167 -41 348 306 76 91 chr17 49878815 49878846 -39625707 - L1ME4a LINE L1 0 6121 6091 1634 138 56 0 chr17 49878846 49879115 -39625438 - AluSx SINE Alu -28 284 1 348 306 76 91 chr17 49879115 49879479 -39625074 - L1ME4a LINE L1 -30 6091 5732 656 118 36 0 chr17 49879625 49879735 -39624818 - AluSg/x SINE Alu -6 306 193 537 142 44 0 chr17 49879748 49879861 -39624692 - Zaphod DNA AcHobo -288 3743 3626 31 44 0 0 chr17 49879908 49879953 -39624600 + AT_rich Low_complexity Low_complexity 1 45 0 671 120 11 0 chr17 49880001 49880093 -39624460 + AluSg SINE Alu 2 94 -216 379 171 13 26 chr17 49880290 49880366 -39624187 - AluS SINE Alu -233 75 1 1541 231 31 39 chr17 49880472 49880984 -39623569 - L1MB7 LINE L1 -2379 4003 3496 1667 167 17 7 chr17 49880989 49881288 -39623265 + AluJo SINE Alu 7 308 -4 874 204 6 0 chr17 49881295 49881467 -39623086 + AluJo SINE Alu 1 173 -139 418 266 46 23 chr17 49881467 49881640 -39622913 - L1MB7 LINE L1 -4217 2167 1991 2046 134 0 0 chr17 49881650 49881955 -39622598 - AluSx SINE Alu -7 305 1 825 227 49 0 chr17 49881955 49882158 -39622395 - L1MB7 LINE L1 -4621 1763 1551 436 131 36 60 chr17 49882175 49882259 -39622294 - AluJb SINE Alu -22 290 209 499 196 89 18 chr17 49883456 49883568 -39620985 + MER5B DNA MER1_type 7 126 -52 184 232 46 133 chr17 49883458 49883609 -39620944 - MER5A DNA MER1_type -15 174 37 * 191 343 137 0 chr17 49883753 49883899 -39620654 + MIR SINE MIR 76 241 -21 1809 117 0 0 chr17 49884658 49884914 -39619639 + AluSq SINE Alu 38 293 -20 1200 128 13 68 chr17 49884914 49885149 -39619404 + AluJb SINE Alu 59 280 -32 180 0 0 0 chr17 49885152 49885172 -39619381 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 745 215 188 38 chr17 49886011 49886272 -39618281 + AluJo SINE Alu 2 301 -1 1868 121 7 35 chr17 49886278 49886593 -39617960 + AluSx SINE Alu 1 307 0 622 210 77 0 chr17 49886674 49886845 -39617708 + L1M4 LINE L1 3589 3775 -2371 236 196 0 39 chr17 49887038 49887089 -39617464 + MIR SINE MIR 61 109 -153 781 159 0 36 chr17 49887165 49887303 -39617250 - FLAM_C SINE Alu 0 133 1 275 281 0 0 chr17 49888117 49888181 -39616372 + L2 LINE L2 3248 3311 -2 188 319 43 43 chr17 49888174 49888290 -39616263 + MIR SINE MIR 82 197 -65 * 2474 40 0 0 chr17 49888294 49888590 -39615963 + AluY SINE Alu 2 297 -14 457 248 120 0 chr17 49888595 49888720 -39615833 + MIR SINE MIR 32 171 -91 258 32 0 0 chr17 49888823 49888854 -39615699 + (T)n Simple_repeat Simple_repeat 1 31 0 555 257 44 62 chr17 49888923 49889141 -39615412 - MIR SINE MIR 0 262 42 189 94 0 0 chr17 49889520 49889552 -39615001 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr17 49891909 49891932 -39612621 + GC_rich Low_complexity Low_complexity 1 23 0 2112 117 3 0 chr17 49892367 49892675 -39611878 - AluSx SINE Alu -3 309 1 1577 126 0 0 chr17 49893029 49893259 -39611294 + AluSg SINE Alu 33 262 -48 1038 196 31 139 chr17 49893634 49893852 -39610701 - L1ME1 LINE L1 -5 6161 5921 1950 113 3 52 chr17 49893852 49894180 -39610373 - AluSx SINE Alu 0 312 1 1038 196 31 139 chr17 49894180 49894351 -39610202 - L1ME1 LINE L1 -245 5921 5825 1915 82 24 31 chr17 49894351 49894518 -39610035 - L1MA2 LINE L1 0 6304 6138 2215 99 3 6 chr17 49894518 49894831 -39609722 - AluSq SINE Alu -1 312 1 1915 82 24 31 chr17 49894831 49894954 -39609599 - L1MA2 LINE L1 -166 6138 6016 1038 196 31 139 chr17 49894954 49895017 -39609536 - L1ME1 LINE L1 -341 5825 5757 1269 159 78 51 chr17 49895111 49895407 -39609146 + AluJb SINE Alu 1 304 -8 185 254 51 17 chr17 49895558 49895617 -39608936 - MIR SINE MIR -174 88 28 2900 57 0 0 chr17 49895865 49896218 -39608335 - L1PA5 LINE L1 -3 6151 5799 240 35 0 0 chr17 49896328 49896357 -39608196 + (TA)n Simple_repeat Simple_repeat 2 30 0 343 255 98 29 chr17 49896666 49896768 -39607785 + L2 LINE L2 3186 3294 -19 1769 158 14 0 chr17 49896899 49897183 -39607370 - AluJb SINE Alu -17 295 8 275 312 82 0 chr17 49898076 49898246 -39606307 + L1ME LINE L1 4573 4756 -1390 231 210 32 0 chr17 49898442 49898504 -39606049 + L1ME LINE L1 5046 5109 -1037 2041 115 3 16 chr17 49898645 49898959 -39605594 + AluSp SINE Alu 1 310 -3 244 311 78 33 chr17 49898975 49899245 -39605308 + L1ME LINE L1 5338 5619 -543 697 246 222 0 chr17 49899833 49900036 -39604517 - MIR SINE MIR 0 262 15 478 335 72 32 chr17 49900359 49900580 -39603973 - MIR SINE MIR -1 261 32 1283 171 5 5 chr17 49900591 49900813 -39603740 + AluJb SINE Alu 1 222 -90 444 156 52 0 chr17 49900867 49900944 -39603609 + AluJb SINE Alu 209 289 -23 1828 146 3 26 chr17 49901308 49901616 -39602937 + AluJb SINE Alu 1 301 -11 516 210 59 29 chr17 49902516 49902656 -39601897 + MIR3 SINE MIR 35 180 -28 371 278 62 28 chr17 49902927 49903071 -39601482 + MIR3 SINE MIR 21 169 -39 1644 159 14 14 chr17 49903143 49903438 -39601115 + AluJo SINE Alu 18 312 0 2095 121 3 0 chr17 49903678 49903976 -39600577 - AluSx SINE Alu -13 299 1 470 305 99 33 chr17 49904144 49904357 -39600196 + MIR SINE MIR 6 232 -30 494 255 125 79 chr17 49904370 49904885 -39599668 - MLT1H1 LTR MaLR -2 553 1 2151 96 14 10 chr17 49904896 49905189 -39599364 - AluSg SINE Alu -16 294 1 2023 114 3 7 chr17 49905388 49905686 -39598867 + AluSq SINE Alu 1 297 -16 2025 134 0 7 chr17 49906460 49906765 -39597788 - AluSx SINE Alu -9 303 1 951 250 121 17 chr17 49906808 49907280 -39597273 + L1MC5 LINE L1 7394 7914 -47 181 371 149 12 chr17 49907550 49907798 -39596755 + L2 LINE L2 2990 3271 -1 2131 114 10 0 chr17 49907975 49908282 -39596271 + AluSx SINE Alu 1 310 -2 324 320 148 4 chr17 49911214 49911393 -39593160 - L1ME3A LINE L1 -267 5903 5696 530 200 183 72 chr17 49911450 49911563 -39592990 + AluJo SINE Alu 2 101 -211 2202 78 34 0 chr17 49911563 49911857 -39592696 + AluSp SINE Alu 1 304 -9 530 200 183 72 chr17 49911857 49911923 -39592630 + AluJo SINE Alu 101 201 -111 1027 193 0 0 chr17 49912032 49912208 -39592345 + AluJb SINE Alu 121 296 -16 412 146 122 12 chr17 49912209 49912291 -39592262 + AluJo SINE Alu 208 298 -14 603 211 62 0 chr17 49912296 49912424 -39592129 - MER3 DNA MER1_type -73 136 1 715 162 0 8 chr17 49912813 49912930 -39591623 + AluJb SINE Alu 89 204 -108 22 0 0 0 chr17 49913069 49913091 -39591462 + AT_rich Low_complexity Low_complexity 1 22 0 743 156 0 16 chr17 49913091 49913213 -39591340 - FLAM_C SINE Alu -9 124 5 1274 144 62 69 chr17 49913246 49913537 -39591016 - AluJb SINE Alu -19 293 5 1524 106 0 0 chr17 49913725 49913942 -39590611 - AluSg/x SINE Alu -11 301 85 281 211 144 0 chr17 49913957 49914047 -39590506 + HAL1 LINE L1 1800 1902 -605 3428 156 20 33 chr17 49914167 49914238 -39590315 - LTR10E LTR ERV1 0 633 563 2081 136 0 3 chr17 49914238 49914548 -39590005 + AluSc SINE Alu 1 309 0 3428 156 20 33 chr17 49914548 49915117 -39589436 - LTR10E LTR ERV1 -70 563 1 368 289 75 6 chr17 49915117 49915276 -39589277 - LTR10E-int LTR ERV1 0 6649 6480 * 3944 274 32 15 chr17 49915271 49916374 -39588179 - Harlequin LTR ERV1 -252 7533 6413 1934 211 20 14 chr17 49916376 49916854 -39587699 - Harlequin LTR ERV1 -1853 4796 2608 3658 120 37 3 chr17 49917438 49918107 -39586446 - Harlequin LTR ERV1 -4308 2588 1897 233 238 0 36 chr17 49918133 49918217 -39586336 + CT-rich Low_complexity Low_complexity 4 84 0 235 167 21 21 chr17 49919794 49919842 -39584711 - L2 LINE L2 -4 3309 3262 1192 108 18 6 chr17 49920737 49920904 -39583649 + MER4D LTR ERV1 313 481 -422 * 1476 114 30 88 chr17 49920895 49921192 -39583361 - MER4D LTR ERV1 -592 280 1 430 257 74 27 chr17 49921263 49921411 -39583142 + MIR SINE MIR 69 223 -39 2068 91 30 0 chr17 49921438 49921735 -39582818 - AluSg SINE Alu -4 306 1 1531 152 0 45 chr17 49924037 49924301 -39580252 + AluJo SINE Alu 31 282 -30 309 266 323 6 chr17 49925208 49925366 -39579187 + MIR SINE MIR 54 261 -1 1410 228 77 8 chr17 49925433 49925823 -39578730 + MLT1C LTR MaLR 7 423 -44 257 190 0 69 chr17 49925855 49925913 -39578640 - MIR SINE MIR -66 142 89 2259 141 135 98 chr17 49926044 49926273 -39578280 + Tigger3b DNA MER2_type 1 220 -2808 2546 64 3 0 chr17 49926273 49926570 -39577983 - AluY SINE Alu -13 298 1 2259 141 135 98 chr17 49926570 49926704 -39577849 + Tigger3b DNA MER2_type 220 348 -2680 2426 78 0 13 chr17 49926704 49927011 -39577542 + AluY SINE Alu 1 303 -8 2259 141 135 98 chr17 49927011 49927307 -39577246 + Tigger3b DNA MER2_type 348 685 -546 1800 127 32 90 chr17 49927407 49927685 -39576868 + Tigger3b DNA MER2_type 875 1127 -1901 1944 102 7 72 chr17 49927685 49927990 -39576563 - AluSx SINE Alu -27 285 1 1800 127 32 90 chr17 49927990 49928088 -39576465 + Tigger3b DNA MER2_type 1127 1229 -2 189 0 0 0 chr17 49928541 49928562 -39575991 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 657 214 60 0 chr17 49928632 49928800 -39575753 + MER104 DNA MER2_type 3 180 0 229 224 0 0 chr17 49928831 49928880 -39575673 + (TA)n Simple_repeat Simple_repeat 1 49 0 537 16 0 0 chr17 49929334 49929396 -39575157 + (TA)n Simple_repeat Simple_repeat 2 63 0 1948 42 0 0 chr17 49929691 49929929 -39574624 - L1P2 LINE L1 -368 5786 5549 1998 141 0 10 chr17 49930141 49930432 -39574121 - AluJo SINE Alu -24 288 1 300 317 50 17 chr17 49931010 49931130 -39573423 + MIR SINE MIR 120 243 -19 209 329 24 12 chr17 49931308 49931390 -39573163 + MIR SINE MIR 1 83 -179 1314 140 5 0 chr17 49931597 49931783 -39572770 + AluSc SINE Alu 103 289 -20 2266 228 97 48 chr17 49931836 49931941 -39572612 + Zaphod DNA AcHobo 1 99 -3932 2138 108 35 3 chr17 49931941 49932229 -39572324 + AluSx SINE Alu 1 297 -15 2266 228 97 48 chr17 49932229 49932670 -39571883 + Zaphod DNA AcHobo 99 517 -3514 3265 118 11 34 chr17 49932670 49932768 -39571785 - MER75 DNA T2_type 0 514 415 2212 119 3 3 chr17 49932768 49933080 -39571473 - AluSx SINE Alu 0 312 1 3265 118 11 34 chr17 49933080 49933506 -39571047 - MER75 DNA T2_type -99 415 2 2266 228 97 48 chr17 49933506 49933714 -39570839 + Zaphod DNA AcHobo 517 713 -3318 2523 70 0 3 chr17 49933714 49934013 -39570540 - AluY SINE Alu -13 298 1 2266 228 97 48 chr17 49934013 49934063 -39570490 + Zaphod DNA AcHobo 713 759 -3272 2201 126 7 0 chr17 49934063 49934228 -39570325 - AluSg SINE Alu -14 296 127 183 42 0 0 chr17 49934228 49934252 -39570301 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2201 126 7 0 chr17 49934252 49934379 -39570174 - AluSg SINE Alu -183 127 2 2266 228 97 48 chr17 49934379 49934508 -39570045 + Zaphod DNA AcHobo 759 983 -3048 517 142 44 0 chr17 49934519 49934632 -39569921 + Zaphod DNA AcHobo 3626 3743 -288 697 180 0 0 chr17 49934645 49934756 -39569797 + AluSg/x SINE Alu 193 303 -9 902 219 5 10 chr17 49934764 49934969 -39569584 + Zaphod DNA AcHobo 3809 4012 -19 423 181 24 0 chr17 49935630 49935713 -39568840 - MLT1K LTR MaLR -9 579 495 2061 139 3 10 chr17 49936874 49937169 -39567384 + AluSx SINE Alu 5 297 -15 847 148 0 15 chr17 49937173 49937308 -39567245 - FLAM_C SINE Alu 0 133 1 1749 244 47 25 chr17 49937319 49937910 -39566643 - L1MC4 LINE L1 -462 7580 6977 4598 161 46 12 chr17 49937910 49938979 -39565574 + L1MB7 LINE L1 5069 6175 -9 799 222 51 19 chr17 49938988 49939204 -39565349 - L1MC4 LINE L1 -1053 6989 6767 1393 153 165 4 chr17 49939455 49939710 -39564843 + AluJb SINE Alu 1 296 -16 2527 93 0 0 chr17 49939712 49940022 -39564531 + AluSg SINE Alu 1 310 0 434 214 56 0 chr17 49940500 49940589 -39563964 + Tigger3(Golem) DNA MER2_type 1 94 -2935 620 129 0 0 chr17 49940601 49940694 -39563859 - AluSg/x SINE Alu -3 306 214 189 358 42 0 chr17 49940948 49941043 -39563510 - L3b LINE CR1 -153 1430 1332 27 0 0 0 chr17 49941221 49941248 -39563305 + AT_rich Low_complexity Low_complexity 1 27 0 485 159 44 165 chr17 49941494 49941676 -39562877 - MER5A DNA MER1_type 0 189 30 536 102 31 31 chr17 49941768 49941896 -39562657 + CT-rich Low_complexity Low_complexity 1 128 0 2467 43 0 36 chr17 49942003 49942344 -39562209 + AluY SINE Alu 1 311 0 240 308 39 39 chr17 49942530 49942634 -39561919 - L2 LINE L2 -666 2648 2545 1436 193 86 52 chr17 49942706 49943089 -39561464 + MSTD LTR MaLR 1 396 0 1793 161 33 13 chr17 49943158 49943462 -39561091 - AluJo SINE Alu -1 311 2 210 125 75 0 chr17 49943465 49943505 -39561048 - MIR SINE MIR -112 150 108 577 266 119 28 chr17 49943904 49944122 -39560431 - MIR SINE MIR -14 248 11 2030 167 37 2 chr17 49944221 49944665 -39559888 - MER89 LTR ERV1 0 559 1 2327 101 10 0 chr17 49944749 49945056 -39559497 - AluSx SINE Alu -2 310 1 235 224 41 0 chr17 49945102 49945151 -39559402 - MIR SINE MIR -54 208 158 1650 187 55 11 chr17 49945151 49945498 -39559055 - MLT1F1 LTR MaLR 0 567 206 401 271 101 0 chr17 49945591 49945720 -39558833 - MIR SINE MIR -71 191 50 180 77 0 0 chr17 49945778 49945804 -39558749 + (TGGGGG)n Simple_repeat Simple_repeat 1 26 0 2181 102 3 17 chr17 49946718 49947013 -39557540 + AluSg SINE Alu 18 308 -2 191 274 113 0 chr17 49947063 49947125 -39557428 - L2 LINE L2 -53 3219 3151 388 283 51 43 chr17 49947127 49947265 -39557288 + MIR3 SINE MIR 21 159 -49 279 167 21 0 chr17 49947265 49947313 -39557240 - MER58A DNA MER1_type -33 74 26 223 171 0 24 chr17 49947403 49947444 -39557109 + MIR SINE MIR 114 153 -55 382 194 0 0 chr17 49947520 49947587 -39556966 + MER103 DNA DNA 47 113 -53 689 248 0 25 chr17 49947710 49947871 -39556682 + MIR SINE MIR 106 262 0 245 278 52 10 chr17 49948306 49948403 -39556150 - L2 LINE L2 -251 3021 2921 2161 106 11 0 chr17 49948426 49948731 -39555822 + AluSx SINE Alu 1 308 0 2159 152 41 110 chr17 49949073 49949354 -39555199 + L1MB5 LINE L1 5625 5846 -328 2143 106 7 3 chr17 49949354 49949659 -39554894 + AluSx SINE Alu 3 308 0 2159 152 41 110 chr17 49949659 49949967 -39554586 + L1MB5 LINE L1 5846 6174 0 333 328 47 26 chr17 49950063 49950255 -39554298 - L2 LINE L2 -896 2418 2223 393 278 134 48 chr17 49950258 49950445 -39554108 - L2 LINE L2 -1 3271 3069 278 343 18 42 chr17 49950867 49951033 -39553520 + MLT1K LTR MaLR 69 230 -358 367 229 185 25 chr17 49951198 49951496 -39553057 + MLT1H LTR MaLR 180 547 -2 384 175 10 107 chr17 49952100 49952137 -39552416 + L1ME4a LINE L1 5561 5600 -521 2151 145 0 0 chr17 49952137 49952433 -39552120 - AluSx SINE Alu -16 296 1 384 175 10 107 chr17 49952433 49952498 -39552055 + L1ME4a LINE L1 5600 5653 -468 2048 96 59 4 chr17 49952807 49953111 -39551442 + AluSq SINE Alu 1 319 0 278 240 55 34 chr17 49953175 49953206 -39551347 + L1ME4a LINE L1 5678 5707 -414 967 276 5 5 chr17 49953206 49953427 -39551126 + MER58A DNA MER1_type 4 224 0 278 240 55 34 chr17 49953427 49953541 -39551012 + L1ME4a LINE L1 5707 5826 -295 1949 132 50 4 chr17 49953541 49953661 -39550892 + AluSx SINE Alu 1 114 -198 189 0 0 0 chr17 49953661 49953682 -39550871 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1949 132 50 4 chr17 49953682 49953842 -39550711 + AluSx SINE Alu 114 294 -18 714 242 38 6 chr17 49953852 49954009 -39550544 + MER5B DNA MER1_type 1 162 -16 490 264 64 54 chr17 49954010 49954033 -39550520 + L1ME4a LINE L1 5823 5844 -277 2305 129 0 0 chr17 49954033 49954343 -39550210 + AluSq SINE Alu 1 310 -3 490 264 64 54 chr17 49954343 49954614 -39549939 + L1ME4a LINE L1 5844 6120 -1 280 239 274 0 chr17 49954809 49954926 -39549627 + MIR SINE MIR 111 259 -3 290 219 123 0 chr17 49955317 49955390 -39549163 - MIR SINE MIR -114 148 67 272 139 0 0 chr17 49955448 49955491 -39549062 - MER5B DNA MER1_type -135 43 1 292 210 0 16 chr17 49955501 49955563 -39548990 - MER5B DNA MER1_type -1 177 117 2291 114 0 0 chr17 49955565 49955863 -39548690 + AluSq SINE Alu 1 298 -15 717 196 39 11 chr17 49955899 49956078 -39548475 + L1ME3A LINE L1 5987 6170 0 1878 147 0 4 chr17 49956304 49956577 -39547976 + AluJb SINE Alu 3 274 -38 1371 271 45 22 chr17 49956826 49957288 -39547265 + MLT1J LTR MaLR 39 511 0 293 319 17 34 chr17 49957905 49958024 -39546529 + MIR3 SINE MIR 81 197 -11 907 169 7 7 chr17 49958118 49958272 -39546281 - FRAM SINE Alu -22 154 1 1805 204 39 62 chr17 49958430 49958531 -39546022 + L1MC5 LINE L1 7079 7181 -780 1951 141 0 39 chr17 49958531 49958837 -39545716 + AluSx SINE Alu 1 294 -18 1805 204 39 62 chr17 49958837 49959150 -39545403 + L1MC5 LINE L1 7181 7477 -484 2355 114 0 9 chr17 49959150 49959465 -39545088 + AluSq SINE Alu 1 312 -1 1805 204 39 62 chr17 49959465 49959643 -39544910 + L1MC5 LINE L1 7477 7658 -303 304 340 0 39 chr17 49959739 49959842 -39544711 + MIR SINE MIR 51 149 -59 386 261 261 20 chr17 49960617 49960816 -39543737 + MIR SINE MIR 5 251 -11 1968 113 29 4 chr17 49960826 49961101 -39543452 - AluJo SINE Alu -19 293 12 220 271 164 25 chr17 49961212 49961334 -39543219 + MIR SINE MIR 115 253 -9 276 149 0 0 chr17 49961336 49961383 -39543170 + (GGAA)n Simple_repeat Simple_repeat 2 48 0 2471 57 40 0 chr17 49961860 49962158 -39542395 - AluY SINE Alu -1 310 1 480 297 34 29 chr17 49962165 49962340 -39542213 - MIR SINE MIR -54 208 33 405 256 101 8 chr17 49962378 49962507 -39542046 - MIR3 SINE MIR -2 206 66 369 250 103 52 chr17 49962748 49962824 -39541729 - L2 LINE L2 0 3272 3187 2364 103 0 0 chr17 49962824 49963126 -39541427 + AluSx SINE Alu 1 302 -10 369 250 103 52 chr17 49963126 49963165 -39541388 - L2 LINE L2 -85 3187 3151 202 267 120 78 chr17 49964525 49964716 -39539837 + L2 LINE L2 2949 3147 -125 352 273 0 0 chr17 49965154 49965231 -39539322 - MIR SINE MIR -112 150 74 191 226 48 32 chr17 49965888 49965950 -39538603 + MIR SINE MIR 41 103 -105 2251 109 7 0 chr17 49966623 49966925 -39537628 + AluSx SINE Alu 1 304 -8 2346 94 7 3 chr17 49967940 49968266 -39536287 - AluSx SINE Alu 0 312 1 384 152 0 0 chr17 49968334 49968400 -39536153 + (TG)n Simple_repeat Simple_repeat 2 67 0 182 333 11 32 chr17 49968623 49968716 -39535837 + MIR SINE MIR 108 198 -64 2246 92 32 0 chr17 49969409 49969693 -39534860 - AluSg SINE Alu -17 293 1 782 158 25 64 chr17 49969716 49969918 -39534635 + MER96B DNA MER1_type? 183 376 -41 226 359 0 51 chr17 49970450 49970567 -39533986 - L2 LINE L2 -6 3307 3197 360 179 40 12 chr17 49970626 49970735 -39533818 - MIR SINE MIR -67 141 37 259 71 0 0 chr17 49970940 49970977 -39533576 + MIR SINE MIR 104 139 -123 382 284 63 0 chr17 49971842 49971969 -39532584 + MER117 DNA MER1_type 63 197 0 537 250 206 0 chr17 49972108 49972292 -39532261 - MIR SINE MIR -33 229 8 404 289 117 39 chr17 49972365 49972545 -39532008 - MIR SINE MIR -51 211 18 360 0 0 0 chr17 49973214 49973254 -39531299 + (GTTTG)n Simple_repeat Simple_repeat 2 41 0 1073 185 31 15 chr17 49973256 49973451 -39531102 - AluJo SINE Alu -30 282 85 489 114 43 0 chr17 49973451 49973521 -39531032 - FRAM SINE Alu -62 114 42 629 306 63 36 chr17 49974576 49974587 -39529966 - MIR SINE MIR 0 262 253 2223 80 0 17 chr17 49974587 49974875 -39529678 + AluSx SINE Alu 1 283 -29 199 0 0 0 chr17 49974875 49974897 -39529656 + (TAA)n Simple_repeat Simple_repeat 2 180 0 629 306 63 36 chr17 49974897 49975136 -39529417 - MIR SINE MIR -9 253 4 227 258 0 32 chr17 49975256 49975318 -39529235 - L2 LINE L2 -30 3283 3224 932 271 168 3 chr17 49976228 49976568 -39527985 + L2 LINE L2 2900 3295 -18 1520 116 4 23 chr17 49976569 49976827 -39527726 + MER2 DNA MER2_type 1 253 -92 236 362 0 21 chr17 49977274 49977415 -39527138 + CT-rich Low_complexity Low_complexity 4 141 0 226 254 0 60 chr17 49977458 49977525 -39527028 + MIR SINE MIR 188 250 -12 258 281 85 12 chr17 49978310 49978392 -39526161 + MIR SINE MIR 74 161 -101 228 246 164 0 chr17 49978854 49978915 -39525638 + MIR SINE MIR 183 253 -9 599 301 84 5 chr17 49978965 49979168 -39525385 + MIR SINE MIR 1 219 -43 513 242 6 68 chr17 49980239 49980400 -39524153 - MIR3 SINE MIR -48 160 10 400 345 88 6 chr17 49981317 49981488 -39523065 - MIR SINE MIR -40 222 38 203 376 35 56 chr17 49981480 49981677 -39522876 - MIR SINE MIR -34 228 36 * 347 314 16 16 chr17 49982050 49982174 -39522379 + MIR3 SINE MIR 77 200 -8 320 255 50 10 chr17 49982489 49982597 -39521956 - MIR SINE MIR -63 145 51 406 320 57 29 chr17 49983007 49983182 -39521371 + MIR3 SINE MIR 26 205 -3 673 286 82 16 chr17 49983764 49984009 -39520544 - MIR SINE MIR 0 262 2 315 310 155 0 chr17 49984530 49984659 -39519894 - MIR3 SINE MIR -26 182 34 687 284 113 6 chr17 49986594 49986939 -39517614 - L1MC4a LINE L1 -1777 6031 5650 1683 72 25 17 chr17 49987213 49987450 -39517103 + AluSq SINE Alu 55 293 -20 2307 81 0 0 chr17 49987454 49987750 -39516803 + AluSc SINE Alu 1 296 -13 320 315 34 27 chr17 49987750 49987899 -39516654 + MER5B DNA MER1_type 28 177 -1 365 275 0 0 chr17 49987900 49987980 -39516573 - MIR3 SINE MIR -48 160 81 1323 111 0 0 chr17 49987994 49988183 -39516370 - AluSc SINE Alu -7 302 114 237 267 29 67 chr17 49990246 49990351 -39514202 - MER5A DNA MER1_type -84 105 5 1982 104 0 49 chr17 49991284 49991592 -39512961 + AluSx SINE Alu 1 293 -19 290 383 23 8 chr17 49991677 49991805 -39512748 + MIR SINE MIR 120 249 -13 247 194 222 37 chr17 49994491 49994599 -39509954 + MIR3 SINE MIR 11 138 -70 217 363 20 48 chr17 49995562 49995708 -39508845 + MIR3 SINE MIR 45 186 -22 773 197 162 10 chr17 49995775 49995973 -39508580 + MIR SINE MIR 33 260 -2 274 256 39 13 chr17 49995990 49996068 -39508485 + L3 LINE CR1 1494 1573 -4 975 203 11 6 chr17 49996123 49996300 -39508253 - MER5B DNA MER1_type 0 178 1 1826 88 3 57 chr17 49996565 49996848 -39507705 + AluSx SINE Alu 37 304 -8 430 273 22 7 chr17 49996959 49997098 -39507455 + Charlie8 DNA MER1_type 7 147 -2270 213 287 82 46 chr17 49997537 49997666 -39506887 - MIR SINE MIR -65 143 3 187 234 104 39 chr17 49997726 49997803 -39506750 - MER5A DNA MER1_type -80 109 28 427 231 71 132 chr17 49998971 49999153 -39505400 - MER91B DNA MER1_type -17 173 3 506 236 236 8 chr17 50001147 50001393 -39503160 - LTR16C LTR ERVL -158 333 32 228 289 0 0 chr17 50002115 50002167 -39502386 - L2 LINE L2 -14 3258 3207 207 0 0 0 chr17 50003079 50003102 -39501451 + (T)n Simple_repeat Simple_repeat 1 23 0 627 69 0 20 chr17 50003104 50003205 -39501348 + MER9 LTR ERVK 364 462 -49 594 281 111 9 chr17 50003803 50004020 -39500533 - MIR SINE MIR -15 247 9 2197 99 0 10 chr17 50005457 50005749 -39498804 + AluSq SINE Alu 3 291 -22 2771 171 36 74 chr17 50005757 50006472 -39498081 - L1MB5 LINE L1 -36 6138 5451 2133 112 0 14 chr17 50007152 50007448 -39497105 + AluSx SINE Alu 4 295 -17 1957 145 3 7 chr17 50007476 50007780 -39496773 + AluSx SINE Alu 1 303 -9 918 171 78 5 chr17 50007836 50008053 -39496500 + MLT1C LTR MaLR 13 245 -222 416 254 61 33 chr17 50009048 50009218 -39495335 - MIR3 SINE MIR -21 187 11 335 315 105 11 chr17 50011699 50011880 -39492673 - MIR3 SINE MIR -1 207 10 220 323 151 21 chr17 50012354 50012519 -39492034 + MIR SINE MIR 7 191 -63 674 333 58 0 chr17 50012654 50012897 -39491656 + MIR SINE MIR 2 258 -4 351 346 23 15 chr17 50013169 50013302 -39491251 + L2 LINE L2 3171 3304 -9 279 79 0 0 chr17 50013303 50013341 -39491212 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 376 311 61 0 chr17 50014731 50014863 -39489690 - MER5B DNA MER1_type -1 177 38 336 134 247 21 chr17 50015189 50015286 -39489267 + L2 LINE L2 3191 3309 -4 393 278 199 0 chr17 50015288 50015464 -39489089 + MIR SINE MIR 43 253 -9 443 283 7 14 chr17 50015661 50015799 -39488754 + (CA)n Simple_repeat Simple_repeat 1 137 0 391 287 112 0 chr17 50016584 50016727 -39487826 - MIR3 SINE MIR -20 188 30 476 328 93 0 chr17 50016939 50017143 -39487410 + MIR SINE MIR 21 243 -19 210 91 0 0 chr17 50017978 50018011 -39486542 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1859 142 21 7 chr17 50018011 50018291 -39486262 - AluJb SINE Alu -25 287 1 203 177 32 16 chr17 50018433 50018495 -39486058 - MIR SINE MIR -137 125 63 558 201 84 79 chr17 50018883 50019097 -39485456 + MLT1D LTR MaLR 1 215 -290 1960 147 3 3 chr17 50019101 50019408 -39485145 + AluSx SINE Alu 1 307 -5 2335 104 3 0 chr17 50019409 50019718 -39484835 + AluSq SINE Alu 1 310 -3 872 230 68 75 chr17 50019765 50020017 -39484536 + MLT1D LTR MaLR 206 493 -12 2356 174 45 40 chr17 50020428 50021010 -39483543 - L1MB3 LINE L1 0 6183 5599 396 55 0 0 chr17 50021019 50021074 -39483479 + (TATG)n Simple_repeat Simple_repeat 2 56 0 662 181 26 9 chr17 50021074 50021180 -39483373 - FLAM_A SINE Alu -192 119 9 1731 163 0 28 chr17 50021189 50021500 -39483053 - AluJo SINE Alu 0 303 1 1253 187 32 61 chr17 50021504 50021614 -39482939 - L1MB3 LINE L1 -580 5603 5491 1989 148 3 6 chr17 50021614 50021946 -39482607 - AluSq SINE Alu 0 313 1 1253 187 32 61 chr17 50021946 50022456 -39482097 - L1MB3 LINE L1 -692 5491 5005 2044 128 23 0 chr17 50023481 50023786 -39480767 + AluSx SINE Alu 1 312 0 966 168 15 61 chr17 50023818 50023892 -39480661 + MER5A DNA MER1_type 3 79 -110 2207 112 0 3 chr17 50023892 50024205 -39480348 + AluSx SINE Alu 1 312 0 966 168 15 61 chr17 50024205 50024326 -39480227 + MER5A DNA MER1_type 79 189 0 424 186 203 17 chr17 50024334 50024452 -39480101 - MER58B DNA MER1_type 0 341 202 1086 167 32 0 chr17 50024702 50024918 -39479635 - LTR26 LTR ERV1 0 603 381 838 248 72 68 chr17 50024980 50025413 -39479140 - MLT1C LTR MaLR -16 451 12 283 246 0 0 chr17 50026185 50026242 -39478311 + MIR SINE MIR 45 101 -107 436 204 57 38 chr17 50026246 50026403 -39478150 + L1MC4a LINE L1 5272 5431 -739 477 189 0 0 chr17 50026408 50026503 -39478050 + L1MD3 LINE L1 7774 7868 -127 1934 108 15 234 chr17 50026503 50027117 -39477436 - LTR12 LTR ERV1 -234 480 2 466 226 52 0 chr17 50027117 50027232 -39477321 + L1MD3 LINE L1 7863 7983 -12 760 192 0 27 chr17 50027236 50027382 -39477171 + FLAM_C SINE Alu 2 143 0 509 302 128 11 chr17 50027417 50027768 -39476785 + L1MC4a LINE L1 5552 5943 -1865 1409 120 53 14 chr17 50027985 50028217 -39476336 - AluJb SINE Alu 0 312 86 876 138 0 0 chr17 50028219 50028335 -39476218 - AluJo/FLAM SINE Alu -186 126 11 204 325 36 12 chr17 50028348 50028431 -39476122 + MIR3 SINE MIR 109 193 -15 512 261 42 47 chr17 50028467 50028682 -39475871 + L2 LINE L2 2842 3055 -258 260 283 152 35 chr17 50029633 50029831 -39474722 - MLT1K LTR MaLR -185 403 183 4285 85 21 85 chr17 50029967 50030676 -39473877 - MER4A LTR ERV1 0 664 1 414 279 46 31 chr17 50031005 50031189 -39473364 - MIR3 SINE MIR -7 201 12 1025 116 0 27 chr17 50031310 50031457 -39473096 - FLAM_C SINE Alu 0 143 1 413 301 224 13 chr17 50032250 50032549 -39472004 - MLT1I LTR MaLR -7 402 41 4940 97 22 12 chr17 50032558 50033242 -39471311 + LTR8 LTR ERV1 1 691 0 466 129 47 0 chr17 50033437 50033522 -39471031 + MER20 DNA MER1_type 89 177 -42 1726 169 3 24 chr17 50033527 50033665 -39470888 + AluJo SINE Alu 1 140 -172 1942 149 7 3 chr17 50033665 50033966 -39470587 + AluJb SINE Alu 5 306 -6 1726 169 3 24 chr17 50033966 50034122 -39470431 + AluJo SINE Alu 140 289 -23 526 173 64 0 chr17 50034412 50034522 -39470031 - MER20 DNA MER1_type -97 122 6 383 289 157 0 chr17 50034582 50034703 -39469850 + MIR3 SINE MIR 39 178 -30 375 41 0 0 chr17 50035099 50035148 -39469405 + (TG)n Simple_repeat Simple_repeat 1 49 0 482 350 118 28 chr17 50035712 50035763 -39468790 - L2 LINE L2 -2 3270 3225 1879 126 52 68 chr17 50035763 50035945 -39468608 + THE1C LTR MaLR 1 184 -191 2339 112 0 0 chr17 50035945 50036240 -39468313 + AluSx SINE Alu 1 295 -17 1879 126 52 68 chr17 50036240 50036438 -39468115 + THE1C LTR MaLR 184 375 0 482 350 118 28 chr17 50036438 50036809 -39467744 - L2 LINE L2 -47 3225 2810 2805 201 18 50 chr17 50036875 50037159 -39467394 + MER82 DNA MER2_type 16 308 -345 1799 183 13 22 chr17 50037159 50037471 -39467082 - AluJo SINE Alu -3 309 1 2805 201 18 50 chr17 50037471 50037551 -39467002 + MER82 DNA MER2_type 308 389 -264 2037 118 9 40 chr17 50037551 50037873 -39466680 + AluSx SINE Alu 1 312 0 2805 201 18 50 chr17 50037873 50038160 -39466393 + MER82 DNA MER2_type 389 647 -6 1958 144 23 3 chr17 50039066 50039365 -39465188 - AluJb SINE Alu -2 310 6 2818 127 23 7 chr17 50039386 50039827 -39464726 - L1MC1 LINE L1 -2 6331 5884 2199 107 17 0 chr17 50039857 50040156 -39464397 - AluSx SINE Alu -8 304 1 2369 66 3 3 chr17 50040175 50040462 -39464091 + AluY SINE Alu 1 287 -24 180 0 0 0 chr17 50040475 50040495 -39464058 + (TA)n Simple_repeat Simple_repeat 1 20 0 1680 194 3 0 chr17 50040743 50041036 -39463517 + AluJo SINE Alu 1 294 -18 181 395 95 7 chr17 50041239 50041386 -39463167 - L3 LINE CR1 -508 1069 910 1336 227 83 19 chr17 50042046 50042420 -39462133 + MLT1J LTR MaLR 39 436 -75 484 349 25 13 chr17 50042483 50042718 -39461835 - ERVL LTR ERVL -651 5113 4876 6831 119 22 35 chr17 50042828 50043098 -39461455 - Tigger3b DNA MER2_type -1811 1217 945 1987 138 4 0 chr17 50043098 50043403 -39461150 + AluJo SINE Alu 8 313 0 6831 119 22 35 chr17 50043403 50043540 -39461013 - Tigger3b DNA MER2_type -2083 945 808 2304 103 0 3 chr17 50043540 50043840 -39460713 - AluSp SINE Alu -14 299 1 6831 119 22 35 chr17 50043840 50044417 -39460136 - Tigger3b DNA MER2_type -2220 808 246 2264 113 0 0 chr17 50044417 50044709 -39459844 - AluSx SINE Alu -20 292 1 6831 119 22 35 chr17 50044709 50044921 -39459632 - Tigger3b DNA MER2_type -2782 246 33 687 162 110 7 chr17 50044941 50045077 -39459476 - MLT1D LTR MaLR -32 473 324 884 195 40 116 chr17 50045234 50045314 -39459239 - MLT1D LTR MaLR -178 327 242 2292 101 0 44 chr17 50045314 50045632 -39458921 + AluSx SINE Alu 1 304 -8 884 195 40 116 chr17 50045632 50045840 -39458713 - MLT1D LTR MaLR -263 242 67 1453 116 0 0 chr17 50045840 50046071 -39458482 + AluSg/x SINE Alu 94 324 0 884 195 40 116 chr17 50046071 50046134 -39458419 - MLT1D LTR MaLR -438 67 1 3119 357 35 16 chr17 50046238 50046831 -39457722 - ERVL LTR ERVL -1073 4581 4001 2311 102 7 0 chr17 50046831 50047134 -39457419 - AluSx SINE Alu -7 305 1 3119 357 35 16 chr17 50047134 50048388 -39456165 - ERVL LTR ERVL -1653 4001 2698 323 107 24 16 chr17 50048411 50048484 -39456069 - LTR41 LTR ERVL 0 795 705 2476 109 0 0 chr17 50048934 50049245 -39455308 - AluSx SINE Alu -1 311 1 622 217 24 12 chr17 50049245 50049411 -39455142 - LTR41 LTR ERVL -605 168 1 994 286 111 24 chr17 50049411 50049872 -39454681 - ERVL LTR ERVL -2323 2673 2173 897 282 33 14 chr17 50050074 50050517 -39454036 - ERVL LTR ERVL -2854 2142 1567 2278 117 0 0 chr17 50050517 50050825 -39453728 - AluSg SINE Alu -2 308 1 897 282 33 14 chr17 50050825 50050963 -39453590 - ERVL LTR ERVL -3429 1567 1433 1791 276 52 34 chr17 50051526 50051631 -39452922 - ERVL LTR ERVL -3582 1414 1312 1627 158 44 7 chr17 50051631 50051952 -39452601 - AluJb SINE Alu 0 331 1 1791 276 52 34 chr17 50051952 50052172 -39452381 - ERVL LTR ERVL -3684 1312 1098 2006 124 3 28 chr17 50052172 50052499 -39452054 - AluSx SINE Alu 0 321 2 1791 276 52 34 chr17 50052499 50052826 -39451727 - ERVL LTR ERVL -3898 1098 747 897 201 0 34 chr17 50052880 50053036 -39451517 - ERVL LTR ERVL -4354 642 491 2594 95 45 0 chr17 50053036 50053395 -39451158 - THE1C LTR MaLR 0 375 1 897 201 0 34 chr17 50053395 50053417 -39451136 - ERVL LTR ERVL -4505 491 470 933 241 65 13 chr17 50053479 50053711 -39450842 - ERVL LTR ERVL -4752 244 1 964 259 105 50 chr17 50053718 50053758 -39450795 - LTR16A LTR ERVL -7 443 407 230 56 28 0 chr17 50053758 50053794 -39450759 + (TTG)n Simple_repeat Simple_repeat 2 38 0 964 259 105 50 chr17 50053794 50053811 -39450742 - LTR16A LTR ERVL -43 407 392 2107 139 0 0 chr17 50053811 50054099 -39450454 - AluSx SINE Alu -24 288 1 964 259 105 50 chr17 50054099 50054460 -39450093 - LTR16A LTR ERVL -58 392 1 548 215 120 0 chr17 50054460 50054618 -39449935 + Charlie4 DNA MER1_type 1782 1958 -3 499 257 79 54 chr17 50054837 50055117 -39449436 + MLT1J2 LTR MaLR 16 302 -148 301 252 216 18 chr17 50055313 50055424 -39449129 - MIR3 SINE MIR -73 135 3 406 128 78 78 chr17 50055987 50056056 -39448497 - MLT1I LTR MaLR 0 409 338 2190 127 7 0 chr17 50056056 50056355 -39448198 - AluSx SINE Alu -11 301 1 406 128 78 78 chr17 50056355 50056387 -39448166 - MLT1I LTR MaLR -70 339 308 335 302 41 102 chr17 50056852 50057038 -39447515 - L2 LINE L2 -424 2890 2733 2214 108 13 0 chr17 50057038 50057345 -39447208 + AluSx SINE Alu 1 311 -1 335 302 41 102 chr17 50057345 50057502 -39447051 - L2 LINE L2 -581 2733 2568 1468 160 100 22 chr17 50057532 50057801 -39446752 + AluJo SINE Alu 1 290 -22 253 325 7 20 chr17 50059131 50059282 -39445271 + (CCG)n Simple_repeat Simple_repeat 1 149 0 405 0 0 0 chr17 50059652 50059697 -39444856 + (TG)n Simple_repeat Simple_repeat 1 45 0 21 36 0 0 chr17 50061354 50061382 -39443171 + AT_rich Low_complexity Low_complexity 1 28 0 776 166 134 27 chr17 50063763 50063950 -39440603 + MER20 DNA MER1_type 4 210 -9 848 217 49 18 chr17 50063972 50064213 -39440340 - MIR SINE MIR -11 251 5 529 323 96 9 chr17 50065305 50065534 -39439019 + MIR SINE MIR 2 250 -12 2042 128 17 0 chr17 50066678 50066975 -39437578 - AluSx SINE Alu -10 302 1 2497 55 14 0 chr17 50068045 50068337 -39436216 + AluY SINE Alu 3 298 -13 353 290 65 45 chr17 50068352 50068642 -39435911 - L1MC5 LINE L1 -207 7754 7459 320 269 19 58 chr17 50068627 50068731 -39435822 - L1MC4 LINE L1 -1339 6703 6604 * 320 128 13 128 chr17 50068688 50068766 -39435787 + L1MCa LINE L1 1995 2063 -4363 315 222 8 111 chr17 50068783 50068909 -39435644 + L1MCa LINE L1 1980 2092 -4334 * 382 196 29 94 chr17 50068810 50069055 -39435498 - L1MC4 LINE L1 -1338 6984 6725 1738 159 47 14 chr17 50069055 50069332 -39435221 + AluJo SINE Alu 1 286 -26 382 196 29 94 chr17 50069332 50069356 -39435197 - L1MC4 LINE L1 -1597 6725 1907 22 0 0 0 chr17 50070176 50070198 -39434355 + AT_rich Low_complexity Low_complexity 1 22 0 211 358 46 37 chr17 50070287 50070396 -39434157 + MIR SINE MIR 42 151 -111 199 258 157 11 chr17 50072077 50072166 -39432387 + L2 LINE L2 3188 3289 -24 311 182 143 0 chr17 50072446 50072523 -39432030 - MIR SINE MIR -65 197 110 1998 132 0 23 chr17 50074089 50074226 -39430327 + AluSx SINE Alu 1 140 -172 2204 118 13 7 chr17 50074226 50074531 -39430022 + AluSx SINE Alu 1 307 -5 1998 132 0 23 chr17 50074531 50074696 -39429857 + AluSx SINE Alu 140 296 -16 310 283 24 124 chr17 50074875 50075089 -39429464 - MIR SINE MIR -51 211 15 180 0 0 0 chr17 50075304 50075324 -39429229 + (A)n Simple_repeat Simple_repeat 1 20 0 342 322 0 0 chr17 50075855 50075942 -39428611 + L2 LINE L2 3186 3272 0 723 155 9 0 chr17 50075997 50076113 -39428440 + FLAM_A SINE Alu 11 127 -15 2151 128 0 10 chr17 50076116 50076429 -39428124 + AluJo SINE Alu 1 310 -2 307 206 14 0 chr17 50076799 50076872 -39427681 + MER53 DNA DNA 1 74 -115 1844 219 74 19 chr17 50076876 50077350 -39427203 + MLT1D LTR MaLR 6 505 0 520 134 52 10 chr17 50077351 50077448 -39427105 - MER53 DNA DNA -72 117 17 2101 87 51 42 chr17 50077709 50078044 -39426509 - THE1B LTR MaLR 0 364 27 304 333 172 48 chr17 50078650 50079191 -39425362 + L1MC4a LINE L1 5324 5931 -1877 1872 163 23 7 chr17 50079353 50079653 -39424900 - AluJb SINE Alu -7 305 1 533 137 44 17 chr17 50079878 50080231 -39424322 + (TG)n Simple_repeat Simple_repeat 1 362 0 404 212 40 10 chr17 50081419 50081518 -39423035 - MIR SINE MIR -65 143 42 2325 99 10 3 chr17 50082408 50082711 -39421842 - AluSx SINE Alu -7 305 1 505 271 119 14 chr17 50082978 50083188 -39421365 + MIR SINE MIR 2 233 -29 596 85 0 0 chr17 50083328 50083410 -39421143 - MSTA LTR MaLR 0 428 347 2362 108 0 13 chr17 50083413 50083728 -39420825 + AluSx SINE Alu 1 311 -1 233 237 51 0 chr17 50083728 50083787 -39420766 + MLT1A1 LTR MaLR 283 344 -21 1919 130 3 21 chr17 50084267 50084574 -39419979 + AluJo SINE Alu 5 306 0 282 282 57 48 chr17 50084972 50085096 -39419457 - MIR SINE MIR -70 192 68 425 250 26 9 chr17 50086240 50086356 -39418197 - Charlie8 DNA MER1_type -2237 180 63 193 315 0 0 chr17 50086386 50086440 -39418113 + L3b LINE CR1 1333 1386 -197 991 135 65 49 chr17 50086656 50086841 -39417712 - AluSg/x SINE Alu -15 297 110 279 116 0 0 chr17 50086841 50086884 -39417669 - Alu SINE Alu -265 43 1 297 0 0 0 chr17 50087124 50087157 -39417396 + (CA)n Simple_repeat Simple_repeat 2 34 0 443 304 40 66 chr17 50087604 50087831 -39416722 + MIR SINE MIR 21 241 -21 184 343 104 0 chr17 50087852 50087919 -39416634 - L2 LINE L2 -40 3273 3200 1104 270 0 0 chr17 50088402 50088650 -39415903 + MIR SINE MIR 5 252 -10 248 250 40 40 chr17 50089810 50089886 -39414667 - L2 LINE L2 -1 3271 3196 1018 244 121 13 chr17 50090028 50090530 -39414023 + L1ME4a LINE L1 5522 6118 -3 2215 132 0 0 chr17 50090566 50090869 -39413684 + AluSx SINE Alu 1 303 -9 1890 161 3 16 chr17 50090940 50091250 -39413303 - AluJb SINE Alu -6 306 1 197 316 79 0 chr17 50091389 50091465 -39413088 + L2 LINE L2 2972 3053 -219 237 211 22 44 chr17 50091545 50091635 -39412918 + L1MC4 LINE L1 6615 6702 -1340 209 200 0 0 chr17 50091635 50091670 -39412883 + (CATA)n Simple_repeat Simple_repeat 1 35 0 392 191 84 15 chr17 50091673 50091804 -39412749 + L1MC4 LINE L1 7903 8042 0 2592 68 0 0 chr17 50092356 50092665 -39411888 + AluY SINE Alu 1 309 -2 250 211 14 28 chr17 50092762 50092833 -39411720 - MLT1I LTR MaLR 0 409 340 473 306 106 57 chr17 50092844 50093185 -39411368 + L2 LINE L2 2862 3219 -53 551 224 35 0 chr17 50093185 50093301 -39411252 + MER5B DNA MER1_type 4 123 -55 2294 83 0 14 chr17 50093325 50093636 -39410917 - AluY SINE Alu 0 307 1 200 226 94 0 chr17 50093645 50093698 -39410855 + MER5A DNA MER1_type 132 189 0 462 272 112 44 chr17 50094007 50094257 -39410296 - MLT1K LTR MaLR -15 573 307 2110 141 0 22 chr17 50094759 50095072 -39409481 + AluSx SINE Alu 5 310 -2 649 272 38 0 chr17 50095144 50095302 -39409251 - MIR SINE MIR -87 175 12 507 272 13 47 chr17 50095836 50096068 -39408485 - MER97c DNA MER1_type? 0 1090 867 2914 193 48 77 chr17 50096169 50096442 -39408111 - MER97b DNA MER1_type? -194 859 580 1966 169 16 3 chr17 50096442 50096750 -39407803 + AluSx SINE Alu 1 312 0 2914 193 48 77 chr17 50096750 50096947 -39407606 - MER97b DNA MER1_type? -473 580 379 2369 94 3 16 chr17 50096947 50097256 -39407297 + AluSx SINE Alu 2 306 -6 2914 193 48 77 chr17 50097256 50097437 -39407116 - MER97b DNA MER1_type? -674 379 194 2260 128 0 0 chr17 50097437 50097743 -39406810 + AluSq SINE Alu 1 306 -7 2914 193 48 77 chr17 50097743 50097883 -39406670 - MER97b DNA MER1_type? -859 194 91 2026 119 20 14 chr17 50097883 50098177 -39406376 - AluSx SINE Alu -16 296 1 2914 193 48 77 chr17 50098177 50098252 -39406301 - MER97b DNA MER1_type? -962 91 15 1422 193 89 4 chr17 50098718 50098998 -39405555 + AluJo SINE Alu 1 304 -8 236 313 107 15 chr17 50099332 50099463 -39405090 + MIR3 SINE MIR 1 143 -65 193 326 105 0 chr17 50100427 50100513 -39404040 + L2 LINE L2 2996 3090 -182 2069 140 0 13 chr17 50101953 50102253 -39402300 + AluJo SINE Alu 10 305 -7 200 125 50 0 chr17 50102265 50102305 -39402248 + A-rich Low_complexity Low_complexity 3 44 0 241 294 22 11 chr17 50102434 50102526 -39402027 + MIR SINE MIR 20 112 -150 1917 181 29 95 chr17 50102729 50103254 -39401299 - MLT1D LTR MaLR 0 505 16 1850 148 3 45 chr17 50103284 50103449 -39401104 - AluJb SINE Alu -15 297 150 2352 116 0 0 chr17 50103449 50103752 -39400801 - AluSx SINE Alu -9 303 1 1850 148 3 45 chr17 50103752 50103896 -39400657 - AluJb SINE Alu -162 150 1 247 167 0 0 chr17 50104920 50104962 -39399591 + 5S rRNA rRNA 1 42 -79 652 218 112 27 chr17 50104962 50105150 -39399403 + MIR SINE MIR 58 261 -1 1034 275 73 3 chr17 50105214 50105530 -39399023 + L3 LINE CR1 1178 1515 -62 357 127 25 13 chr17 50105872 50105951 -39398602 - L1MB7 LINE L1 -1 6183 6104 1164 106 0 0 chr17 50106247 50106426 -39398127 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 344 317 104 26 chr17 50106719 50106949 -39397604 - L1ME4a LINE L1 -2 6119 5872 509 244 228 6 chr17 50107452 50107632 -39396921 - MIR SINE MIR -35 227 8 2016 163 0 3 chr17 50107730 50108024 -39396529 - AluSx SINE Alu -18 294 2 421 268 42 14 chr17 50108820 50108962 -39395591 - MIR SINE MIR -82 180 35 246 287 96 9 chr17 50109593 50109708 -39394845 + MIR SINE MIR 21 145 -117 267 118 167 108 chr17 50109885 50109987 -39394566 + MIR SINE MIR 129 236 -26 2282 118 0 0 chr17 50110201 50110505 -39394048 + AluSx SINE Alu 1 304 -8 2316 109 10 0 chr17 50110989 50111292 -39393261 + AluSx SINE Alu 1 306 -6 2324 102 6 13 chr17 50112043 50112357 -39392196 - AluSx SINE Alu 0 312 1 2206 127 7 0 chr17 50112666 50112974 -39391579 - AluSx SINE Alu -2 310 1 687 214 93 16 chr17 50113278 50113460 -39391093 + MIR SINE MIR 33 228 -34 437 168 158 0 chr17 50113665 50113760 -39390793 - L1MB7 LINE L1 0 6184 6075 503 299 152 5 chr17 50114141 50114365 -39390188 + MIR SINE MIR 4 260 -2 2043 119 25 0 chr17 50115327 50115632 -39388921 - AluSx SINE Alu 0 312 1 1374 236 114 0 chr17 50115662 50116047 -39388506 + L1MB5 LINE L1 5746 6174 0 258 156 0 0 chr17 50116559 50116604 -39387949 + GA-rich Low_complexity Low_complexity 1 45 0 310 0 0 0 chr17 50116684 50116719 -39387834 + U2 snRNA snRNA 1 35 -153 1243 140 0 6 chr17 50117172 50117350 -39387203 + AluJo SINE Alu 1 177 -135 282 256 226 23 chr17 50117594 50117673 -39386880 + MIR SINE MIR 53 115 -147 333 0 0 0 chr17 50117673 50117710 -39386843 + (ATG)n Simple_repeat Simple_repeat 3 39 0 282 256 226 23 chr17 50117710 50117763 -39386790 + MIR SINE MIR 115 212 -50 1399 196 100 6 chr17 50118725 50119036 -39385517 + MER58B DNA MER1_type 2 341 0 1889 139 0 24 chr17 50119040 50119334 -39385219 + AluJo SINE Alu 26 312 0 2510 63 0 16 chr17 50119374 50119690 -39384863 + AluY SINE Alu 1 311 0 2310 114 3 0 chr17 50120405 50120711 -39383842 - AluSx SINE Alu -5 307 1 225 0 0 0 chr17 50121224 50121249 -39383304 + (TA)n Simple_repeat Simple_repeat 2 26 0 6464 27 0 1 chr17 50121249 50122029 -39382524 - L1PA5 LINE L1 -5 6149 5371 274 303 55 28 chr17 50122358 50122576 -39381977 + L1ME4a LINE L1 4479 4702 -1444 22 0 0 0 chr17 50122798 50122820 -39381733 + AT_rich Low_complexity Low_complexity 1 22 0 359 253 123 29 chr17 50122876 50123046 -39381507 + L1ME4a LINE L1 5112 5297 -849 2052 149 0 3 chr17 50123090 50123398 -39381155 + AluJb SINE Alu 6 312 0 2174 128 0 0 chr17 50123428 50123724 -39380829 + AluSx SINE Alu 1 296 -16 1247 144 31 0 chr17 50123769 50123964 -39380589 - L1MC1 LINE L1 -6 6327 6127 1907 101 101 0 chr17 50124173 50124440 -39380113 + AluSq SINE Alu 1 294 -19 436 323 31 0 chr17 50124441 50124667 -39379886 + L1ME4a LINE L1 5670 5902 -219 258 277 143 0 chr17 50125169 50125281 -39379272 + L1ME4a LINE L1 5990 6117 -4 775 138 0 32 chr17 50125315 50125438 -39379115 + FLAM_C SINE Alu 1 119 -24 541 104 0 0 chr17 50125751 50125828 -39378725 + AluSg/x SINE Alu 215 291 -18 27 0 0 0 chr17 50125849 50125876 -39378677 + AT_rich Low_complexity Low_complexity 1 27 0 228 282 43 68 chr17 50126131 50126248 -39378305 + MIR SINE MIR 21 134 -74 2332 113 3 0 chr17 50126409 50126720 -39377833 - AluSx SINE Alu 0 312 1 1980 146 10 0 chr17 50127289 50127598 -39376955 + AluJo SINE Alu 1 312 0 270 56 0 0 chr17 50128833 50128869 -39375684 + (TTTTG)n Simple_repeat Simple_repeat 4 39 0 1322 14 0 0 chr17 50128869 50129015 -39375538 - L1PA5 LINE L1 -16 6138 5993 1857 137 10 13 chr17 50129043 50129349 -39375204 + AluJo SINE Alu 1 305 -7 285 318 26 20 chr17 50129349 50129500 -39375053 + CT-rich Low_complexity Low_complexity 3 154 0 2283 87 0 0 chr17 50129795 50130084 -39374469 + AluSg SINE Alu 1 289 -21 2003 101 0 0 chr17 50130084 50130361 -39374192 - AluSx SINE Alu -35 277 1 657 178 56 2 chr17 50130792 50130939 -39373614 + L1MC3 LINE L1 7645 8042 0 1938 158 0 3 chr17 50130951 50131255 -39373298 + AluJo SINE Alu 1 303 -9 215 176 0 39 chr17 50131426 50131477 -39373076 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 318 263 13 0 chr17 50132745 50132821 -39371732 + MER58 DNA MER1_type 11 87 -128 216 86 0 0 chr17 50132830 50132865 -39371688 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 356 314 21 21 chr17 50133037 50133177 -39371376 - MLT1J LTR MaLR -371 140 1 835 286 0 17 chr17 50133456 50133687 -39370866 - MIR SINE MIR 0 262 36 569 205 4 4 chr17 50133991 50134257 -39370296 + (TCCA)n Simple_repeat Simple_repeat 1 266 0 519 179 6 19 chr17 50134294 50134456 -39370097 + (TCCA)n Simple_repeat Simple_repeat 3 162 0 938 242 13 0 chr17 50134470 50135076 -39369477 + (TCCA)n Simple_repeat Simple_repeat 1 795 0 495 259 47 57 chr17 50135233 50135426 -39369127 - MIR SINE MIR -56 206 16 197 336 47 19 chr17 50135522 50135629 -39368924 + L2 LINE L2 3183 3292 -21 785 254 86 63 chr17 50137166 50137560 -39366993 - MLT1J LTR MaLR 0 511 109 323 313 9 27 chr17 50138524 50138636 -39365917 - MIR3 SINE MIR -20 188 79 420 333 13 13 chr17 50142421 50142574 -39361979 - MIR SINE MIR -10 252 100 2164 98 7 0 chr17 50143368 50143665 -39360888 + AluSq SINE Alu 1 299 -14 2022 126 0 23 chr17 50144864 50145173 -39359380 + AluSx SINE Alu 1 302 -10 1645 153 56 17 chr17 50146404 50146692 -39357861 + AluJo SINE Alu 11 309 -3 2091 94 4 0 chr17 50146704 50146981 -39357572 + AluSg SINE Alu 16 293 -17 334 190 150 10 chr17 50147224 50147324 -39357229 - MIR3 SINE MIR -27 181 68 555 237 30 0 chr17 50148948 50149083 -39355470 - MIR SINE MIR -88 174 36 2099 115 0 7 chr17 50149668 50149972 -39354581 + AluSx SINE Alu 1 302 -10 562 234 39 26 chr17 50150130 50150284 -39354269 + MER103 DNA DNA 1 156 -10 268 328 142 8 chr17 50150396 50150530 -39354023 + MER5A DNA MER1_type 38 189 0 216 149 0 0 chr17 50152571 50152618 -39351935 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 670 144 0 2 chr17 50153290 50153560 -39350993 + AluJ SINE Alu 1 311 0 2479 55 0 3 chr17 50154015 50154324 -39350229 + AluY SINE Alu 1 308 -3 1718 119 66 28 chr17 50154978 50155264 -39349289 + AluSx SINE Alu 1 297 -15 2329 86 0 3 chr17 50156428 50156732 -39347821 - AluSq SINE Alu -10 303 1 203 189 0 0 chr17 50156785 50156822 -39347731 + A-rich Low_complexity Low_complexity 1 37 0 2273 92 0 7 chr17 50157253 50157557 -39346996 + AluSq SINE Alu 1 302 -11 2022 117 0 0 chr17 50158058 50158339 -39346214 - AluSx SINE Alu -10 302 22 225 121 0 0 chr17 50158851 50158884 -39345669 - Alu SINE Alu -135 168 136 278 333 21 0 chr17 50158887 50158983 -39345570 - MIR SINE MIR -116 146 49 896 129 0 0 chr17 50159188 50159312 -39345241 + FLAM_C SINE Alu 2 125 -8 1924 91 0 143 chr17 50159360 50159723 -39344830 + AluSx SINE Alu 1 311 -1 256 254 95 116 chr17 50159948 50160137 -39344416 - MER5A DNA MER1_type -2 187 3 321 267 12 0 chr17 50160647 50160733 -39343820 - MIR SINE MIR -100 162 76 1128 182 111 77 chr17 50161924 50162124 -39342429 - MLT1B LTR MaLR -11 379 160 2203 97 3 10 chr17 50162124 50162433 -39342120 + AluSg SINE Alu 1 307 -3 1128 182 111 77 chr17 50162433 50162594 -39341959 - MLT1B LTR MaLR -230 160 6 201 258 125 62 chr17 50163728 50163856 -39340697 + L2 LINE L2 2924 3059 -213 211 333 132 26 chr17 50164628 50164742 -39339811 + L2 LINE L2 3133 3258 -14 320 232 0 14 chr17 50164928 50164997 -39339556 + L1ME4a LINE L1 6037 6104 -17 1526 183 35 0 chr17 50165595 50165884 -39338669 + AluJb SINE Alu 1 299 -13 359 294 147 25 chr17 50165914 50166077 -39338476 + L1M4 LINE L1 2984 3166 -2980 926 200 0 0 chr17 50166163 50166323 -39338230 + FRAM SINE Alu 1 160 -6 270 242 16 0 chr17 50166352 50166414 -39338139 - L2 LINE L2 0 3272 3210 1946 147 0 3 chr17 50167431 50167730 -39336823 - AluJo SINE Alu -14 298 1 207 0 0 0 chr17 50167746 50167769 -39336784 + (TG)n Simple_repeat Simple_repeat 1 23 0 2078 130 0 0 chr17 50167926 50168225 -39336328 - AluSx SINE Alu -13 299 1 2358 83 0 3 chr17 50169418 50169730 -39334823 - AluY SINE Alu 0 311 1 508 196 0 11 chr17 50170141 50170233 -39334320 + FLAM_A SINE Alu 33 123 -19 25 0 0 0 chr17 50170234 50170259 -39334294 + AT_rich Low_complexity Low_complexity 1 25 0 3537 119 27 93 chr17 50170742 50171279 -39333274 + L1MA2 LINE L1 5653 6136 -168 2288 48 0 31 chr17 50171279 50171645 -39332908 + AluY SINE Alu 1 357 0 3537 119 27 93 chr17 50171645 50171804 -39332749 + L1MA2 LINE L1 6136 6304 0 28 48 0 0 chr17 50171804 50171846 -39332707 + AT_rich Low_complexity Low_complexity 1 42 0 1866 161 0 19 chr17 50171849 50172166 -39332387 + AluJo SINE Alu 1 311 -1 539 308 73 107 chr17 50172233 50172737 -39331816 + L1ME4a LINE L1 5393 5868 -253 1921 122 37 0 chr17 50172737 50173032 -39331521 - AluSx SINE Alu -6 306 1 539 308 73 107 chr17 50173032 50173235 -39331318 + L1ME4a LINE L1 5868 6076 -45 1757 168 13 7 chr17 50173569 50173872 -39330681 + AluJb SINE Alu 4 308 -4 448 256 94 31 chr17 50174336 50174496 -39330057 - MER5A DNA MER1_type 0 189 20 1817 152 7 3 chr17 50175762 50176051 -39328502 + AluJb SINE Alu 2 291 -21 23 0 0 0 chr17 50176053 50176076 -39328477 + AT_rich Low_complexity Low_complexity 1 23 0 263 250 0 16 chr17 50178822 50178886 -39325667 + CT-rich Low_complexity Low_complexity 1 63 0 2450 57 94 99 chr17 50179195 50179239 -39325314 + L1MA2 LINE L1 5871 5914 -390 2373 43 0 30 chr17 50179239 50179540 -39325013 + AluY SINE Alu 1 292 -19 2450 57 94 99 chr17 50179540 50179743 -39324810 + L1MA2 LINE L1 5914 6116 -188 2052 75 79 0 chr17 50179743 50180021 -39324532 + AluSq SINE Alu 1 300 -13 2361 78 0 0 chr17 50180024 50180333 -39324220 + AluY SINE Alu 1 309 -2 2450 57 94 99 chr17 50180333 50180516 -39324037 + L1MA2 LINE L1 6118 6304 0 2040 135 3 0 chr17 50180756 50181067 -39323486 + AluSx SINE Alu 1 312 0 2183 76 0 0 chr17 50181136 50181411 -39323142 + AluY SINE Alu 1 275 -36 222 37 0 0 chr17 50181414 50181441 -39323112 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 641 183 78 0 chr17 50181442 50181557 -39322996 + MER3 DNA MER1_type 1 124 -85 1093 121 6 0 chr17 50181927 50182092 -39322461 - AluSg/x SINE Alu -18 292 127 2329 101 0 16 chr17 50182097 50182415 -39322138 - AluSq SINE Alu 0 313 1 2327 77 0 0 chr17 50182520 50182819 -39321734 + AluY SINE Alu 1 299 -12 224 314 93 0 chr17 50183531 50183649 -39320904 - MER5B DNA MER1_type 0 178 50 3015 61 3 0 chr17 50183686 50184049 -39320504 - THE1B LTR MaLR 0 364 1 1566 170 0 7 chr17 50184049 50184325 -39320228 - AluJb SINE Alu -38 274 1 261 170 21 0 chr17 50184338 50184385 -39320168 + MER5B DNA MER1_type 126 173 -5 2196 111 0 0 chr17 50184386 50184684 -39319869 + AluSx SINE Alu 1 298 -14 309 287 134 13 chr17 50184708 50184865 -39319688 + L3 LINE CR1 278 453 -1124 2493 106 34 14 chr17 50185167 50185524 -39319029 - THE1B LTR MaLR 0 364 1 293 204 68 23 chr17 50186076 50186164 -39318389 - MER5B DNA MER1_type -35 143 52 243 301 19 29 chr17 50186247 50186350 -39318203 + MIR SINE MIR 96 197 -65 2055 136 3 0 chr17 50186727 50187035 -39317518 + AluSx SINE Alu 1 309 -3 616 177 0 0 chr17 50187438 50187534 -39317019 + FLAM_A SINE Alu 1 96 -46 341 75 19 0 chr17 50187535 50187588 -39316965 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 491 262 96 70 chr17 50187806 50188035 -39316518 + L1MC/D LINE L1 5574 5808 -2000 1909 147 0 3 chr17 50188212 50188511 -39316042 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr17 50189054 50189076 -39315477 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr17 50190739 50190762 -39313791 + (A)n Simple_repeat Simple_repeat 1 23 0 1046 193 0 27 chr17 50193871 50194094 -39310459 + AluJo SINE Alu 84 300 -12 204 163 0 0 chr17 50194581 50194624 -39309929 + T-rich Low_complexity Low_complexity 1 43 0 183 139 0 0 chr17 50194778 50194814 -39309739 + (T)n Simple_repeat Simple_repeat 1 36 0 194 105 26 0 chr17 50195952 50195990 -39308563 + A-rich Low_complexity Low_complexity 4 42 0 794 268 78 53 chr17 50198300 50198621 -39305932 - MER102b DNA MER1_type -12 329 1 266 198 48 203 chr17 50200633 50200742 -39303811 + MER5B DNA MER1_type 4 68 -110 529 227 109 0 chr17 50200742 50200861 -39303692 - FLAM_A SINE Alu -1 132 1 266 198 48 203 chr17 50200861 50200958 -39303595 + MER5B DNA MER1_type 68 178 0 1640 161 43 26 chr17 50201036 50201340 -39303213 - MER2 DNA MER2_type -25 320 12 1792 138 27 10 chr17 50201374 50201671 -39302882 - AluSx SINE Alu -10 302 1 350 289 235 15 chr17 50202186 50202390 -39302163 + MIR SINE MIR 4 252 -10 595 252 25 46 chr17 50205334 50205572 -39298981 - L1M4 LINE L1 -1520 4626 4394 1101 96 0 6 chr17 50205572 50205728 -39298825 + MST-int LTR MaLR 78 232 -1419 761 235 83 0 chr17 50205748 50205978 -39298575 - L1M4 LINE L1 -1778 4368 4120 315 0 0 0 chr17 50206535 50206570 -39297983 + (TG)n Simple_repeat Simple_repeat 2 36 0 2248 62 14 0 chr17 50206573 50206863 -39297690 - AluY SINE Alu -17 294 1 606 292 67 33 chr17 50206967 50207207 -39297346 - MIR SINE MIR -6 256 9 290 361 56 7 chr17 50207998 50208142 -39296411 + MIR3 SINE MIR 10 160 -48 269 254 122 66 chr17 50208142 50208323 -39296230 - MER117 DNA MER1_type 0 197 7 225 267 111 44 chr17 50209817 50209907 -39294646 - MER91C DNA MER1_type -5 135 40 1702 169 23 7 chr17 50210911 50211218 -39293335 + AluJb SINE Alu 1 312 0 2220 95 7 3 chr17 50211218 50211524 -39293029 + AluSg SINE Alu 1 307 -3 929 161 6 58 chr17 50211990 50212164 -39292389 + MER58A DNA MER1_type 48 212 -12 1439 197 16 25 chr17 50212166 50212481 -39292072 + AluJo SINE Alu 1 312 0 1523 184 0 3 chr17 50212587 50212869 -39291684 - AluJb SINE Alu -31 281 1 1931 121 10 10 chr17 50212951 50213256 -39291297 + AluSq SINE Alu 6 310 -3 2051 109 41 0 chr17 50213902 50214195 -39290358 - AluSg SINE Alu -5 305 1 495 169 0 0 chr17 50214195 50214272 -39290281 - AluS SINE Alu -230 82 6 487 302 12 12 chr17 50214275 50214447 -39290106 - Charlie2 DNA MER1_type -2495 287 116 2136 105 3 3 chr17 50214581 50214877 -39289676 - AluSx SINE Alu -16 296 1 181 263 70 18 chr17 50216719 50216776 -39287777 - L2 LINE L2 -217 3055 2996 1786 124 4 0 chr17 50217022 50217295 -39287258 + AluSx SINE Alu 39 312 0 1428 165 15 79 chr17 50217324 50217652 -39286901 + AluJo SINE Alu 1 307 -5 2125 93 16 19 chr17 50217652 50217965 -39286588 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr17 50218077 50218098 -39286455 + AT_rich Low_complexity Low_complexity 1 21 0 1951 69 65 14 chr17 50218102 50218379 -39286174 - AluY SINE Alu -20 291 1 646 199 75 14 chr17 50218636 50218782 -39285771 + FRAM SINE Alu 10 164 -12 1518 113 0 5 chr17 50218786 50218999 -39285554 - AluSx SINE Alu -100 212 1 984 274 48 48 chr17 50219020 50219433 -39285120 + L2 LINE L2 2540 2952 -362 2154 89 10 0 chr17 50219501 50219794 -39284759 - AluY SINE Alu -15 296 1 2337 81 0 3 chr17 50219827 50220134 -39284419 + AluSq SINE Alu 1 306 -7 456 288 111 86 chr17 50220334 50220639 -39283914 + L1M4 LINE L1 4679 4996 -1150 2050 125 3 3 chr17 50220639 50220944 -39283609 - AluSx SINE Alu -7 305 1 456 288 111 86 chr17 50220944 50220999 -39283554 + L1M4 LINE L1 4996 5048 -1098 660 182 208 13 chr17 50221010 50221169 -39283384 + MIR SINE MIR 2 191 -71 222 331 83 32 chr17 50221279 50221436 -39283117 + MIR SINE MIR 47 211 -51 630 184 101 19 chr17 50221488 50221646 -39282907 - MER20 DNA MER1_type -45 174 4 1037 240 71 65 chr17 50221833 50222329 -39282224 + L1MC5 LINE L1 6881 7379 -582 244 233 123 14 chr17 50222506 50222579 -39281974 + L1MEc LINE L1 32 112 -6284 529 345 27 37 chr17 50222595 50222891 -39281662 + L1MEc LINE L1 181 473 -5923 198 0 0 0 chr17 50223356 50223378 -39281175 + (CA)n Simple_repeat Simple_repeat 2 23 0 * 297 0 0 0 chr17 50223377 50223410 -39281143 + (TC)n Simple_repeat Simple_repeat 1 33 0 1447 131 23 0 chr17 50223473 50223694 -39280859 + AluSg/x SINE Alu 87 312 0 2116 109 0 28 chr17 50223954 50224265 -39280288 + AluSx SINE Alu 1 304 -8 261 0 0 0 chr17 50224265 50224294 -39280259 + (GA)n Simple_repeat Simple_repeat 2 30 0 776 172 130 12 chr17 50224353 50224522 -39280031 - AluSg/x SINE Alu -23 286 98 320 27 0 0 chr17 50224522 50224559 -39279994 + AluSc SINE Alu 242 278 -21 23 54 0 0 chr17 50225896 50225933 -39278620 + AT_rich Low_complexity Low_complexity 1 37 0 2297 96 0 0 chr17 50226437 50226749 -39277804 + AluSx SINE Alu 1 312 0 2121 112 0 3 chr17 50226983 50227287 -39277266 - AluSc SINE Alu -6 303 1 2232 88 0 0 chr17 50227397 50227685 -39276868 + AluSx SINE Alu 1 288 -24 181 0 0 0 chr17 50227685 50227705 -39276848 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 365 315 130 25 chr17 50227836 50227998 -39276555 + L2 LINE L2 3131 3309 -4 21 0 0 0 chr17 50228526 50228547 -39276006 + AT_rich Low_complexity Low_complexity 1 21 0 237 33 0 0 chr17 50228683 50228713 -39275840 + (A)n Simple_repeat Simple_repeat 1 30 0 928 239 42 82 chr17 50229018 50229470 -39275083 + L2 LINE L2 1746 2179 -1135 612 26 0 0 chr17 50229514 50229591 -39274962 - L1PA3 LINE L1 -1 6154 6078 1636 181 23 19 chr17 50229591 50229900 -39274653 - AluJb SINE Alu -2 310 1 542 250 76 16 chr17 50229900 50230084 -39274469 + L2 LINE L2 3119 3313 0 390 338 126 4 chr17 50230106 50230337 -39274216 - MIR SINE MIR 0 262 4 1621 193 25 3 chr17 50230504 50230789 -39273764 - AluJo SINE Alu -21 291 1 317 266 171 57 chr17 50230933 50231091 -39273462 + MER5B DNA MER1_type 1 176 -2 200 135 58 19 chr17 50231394 50231446 -39273107 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 777 150 0 24 chr17 50232459 50232586 -39271967 + FLAM_C SINE Alu 1 124 -9 1930 136 7 23 chr17 50232913 50233222 -39271331 + AluJb SINE Alu 1 304 -8 1970 153 0 7 chr17 50233564 50233859 -39270694 - AluSx SINE Alu -19 293 1 1915 125 7 4 chr17 50234094 50234366 -39270187 + AluSx SINE Alu 1 273 -39 202 27 0 54 chr17 50234377 50234414 -39270139 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 403 183 17 26 chr17 50238095 50238210 -39266343 + L1MC4a LINE L1 5941 6054 -1754 2347 220 160 34 chr17 50238213 50239200 -39265353 + L1MC4a LINE L1 6116 7226 -582 1081 164 26 10 chr17 50239200 50239437 -39265116 + AluJb SINE Alu 85 324 0 1266 206 96 42 chr17 50239446 50239926 -39264627 + L1MC4a LINE L1 7224 7729 -79 1997 114 36 0 chr17 50239977 50240258 -39264295 - AluSx SINE Alu -21 291 1 1133 223 90 82 chr17 50240749 50240840 -39263713 - L1M4 LINE L1 -1393 4753 4664 2334 96 0 3 chr17 50240840 50241143 -39263410 + AluSx SINE Alu 1 302 -10 1133 223 90 82 chr17 50241143 50241684 -39262869 - L1M4 LINE L1 -1482 4664 4116 1687 189 0 3 chr17 50241684 50241980 -39262573 - AluJb SINE Alu -17 295 1 2354 103 0 0 chr17 50242185 50242485 -39262068 - AluSx SINE Alu -12 300 1 307 244 44 25 chr17 50242561 50242721 -39261832 - L1ME LINE L1 -5374 696 534 363 308 31 126 chr17 50242903 50243260 -39261293 - L1ME LINE L1 -5540 530 208 559 269 35 67 chr17 50243915 50244231 -39260322 + LTR37B LTR ERV1 1 306 -162 1932 173 0 0 chr17 50244328 50244634 -39259919 + AluJb SINE Alu 6 311 -1 230 116 23 0 chr17 50244634 50244677 -39259876 + GA-rich Low_complexity Low_complexity 1 44 0 723 115 0 0 chr17 50244861 50244965 -39259588 + FRAM SINE Alu 67 170 -6 182 189 351 0 chr17 50246739 50246813 -39257740 - MIR SINE MIR -88 120 21 269 242 116 32 chr17 50248055 50248150 -39256403 + MER5A DNA MER1_type 37 139 -50 604 192 0 0 chr17 50248222 50248326 -39256227 - FLAM_A SINE Alu -37 105 2 1947 127 0 11 chr17 50248735 50249034 -39255519 + AluSx SINE Alu 11 306 0 1919 120 60 20 chr17 50249046 50249347 -39255206 + AluSq SINE Alu 1 313 0 1774 185 0 7 chr17 50250122 50250419 -39254134 - AluJb SINE Alu -17 295 1 824 169 0 7 chr17 50250419 50250555 -39253998 - AluJb SINE Alu -177 135 1 984 192 74 30 chr17 50251299 50251502 -39253051 + AluJo SINE Alu 1 212 -100 983 153 6 6 chr17 50251527 50251690 -39252863 - AluJb SINE Alu -145 167 5 280 314 76 9 chr17 50251705 50251810 -39252743 - L2 LINE L2 -782 2532 2421 255 258 114 45 chr17 50252072 50252204 -39252349 - L2 LINE L2 -2 3311 3171 21 0 0 0 chr17 50252330 50252351 -39252202 + AT_rich Low_complexity Low_complexity 1 21 0 1320 174 0 69 chr17 50253247 50253523 -39251030 + AluJo SINE Alu 31 287 -25 255 282 14 11 chr17 50254364 50254512 -39250041 + MIR SINE MIR 64 261 -1 1436 226 77 9 chr17 50254581 50255011 -39249542 + MLT1C LTR MaLR 9 467 0 343 292 0 73 chr17 50255083 50255272 -39249281 - MIR SINE MIR -64 198 25 5681 135 76 48 chr17 50255318 50256412 -39248141 + Tigger3b DNA MER2_type 1 1062 -1966 305 62 21 0 chr17 50256412 50256460 -39248093 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1956 76 7 66 chr17 50256461 50256762 -39247791 - AluSx SINE Alu -29 283 1 5681 135 76 48 chr17 50256762 50256859 -39247694 + Tigger3b DNA MER2_type 1061 1228 -3 628 229 47 0 chr17 50257413 50257583 -39246970 + MER104 DNA MER2_type 3 180 0 205 231 19 0 chr17 50257609 50257661 -39246892 + (TA)n Simple_repeat Simple_repeat 1 53 0 195 256 0 0 chr17 50258441 50258480 -39246073 + L2 LINE L2 3186 3224 -89 318 186 0 0 chr17 50258503 50258562 -39245991 + HsTC2 DNA Tc2 1840 1898 0 1873 177 3 0 chr17 50258729 50259023 -39245530 - AluJb SINE Alu -17 295 1 279 281 92 5 chr17 50259863 50260059 -39244494 + L1ME3A LINE L1 4544 4756 -1390 497 313 112 65 chr17 50260444 50260763 -39243790 + L1ME3A LINE L1 5318 5621 -549 901 191 116 92 chr17 50260763 50260929 -39243624 - AluJo SINE Alu -1 301 140 2413 77 3 16 chr17 50260929 50261242 -39243311 - AluSp SINE Alu -4 309 1 2380 66 3 0 chr17 50261251 50261539 -39243014 - AluY SINE Alu -22 289 1 901 191 116 92 chr17 50261539 50261656 -39242897 - AluJo SINE Alu -169 133 1 497 313 112 65 chr17 50261656 50261892 -39242661 + L1ME3A LINE L1 5621 5899 -271 2688 32 0 3 chr17 50263664 50263976 -39240577 + AluY SINE Alu 1 311 0 1235 124 0 43 chr17 50264874 50265084 -39239469 + AluSg/x SINE Alu 97 297 -13 2354 89 0 16 chr17 50266092 50266405 -39238148 + AluSg SINE Alu 1 308 -2 2222 116 0 0 chr17 50266879 50267171 -39237382 - AluSx SINE Alu -20 292 1 235 378 170 17 chr17 50267353 50267594 -39236959 - L2 LINE L2 -5 3267 2990 608 214 83 16 chr17 50267889 50268141 -39236412 - L1MC5 LINE L1 -84 7877 7609 2133 128 0 7 chr17 50268365 50268670 -39235883 + AluSx SINE Alu 1 303 -9 2213 108 14 3 chr17 50269438 50269734 -39234819 - AluSq SINE Alu -14 299 1 2076 136 7 0 chr17 50269956 50270257 -39234296 + AluSq SINE Alu 1 303 -10 1434 122 5 14 chr17 50270266 50270487 -39234066 + AluJb SINE Alu 59 277 -35 513 0 0 0 chr17 50270487 50270544 -39234009 + (CA)n Simple_repeat Simple_repeat 1 57 0 274 292 10 31 chr17 50270720 50270816 -39233737 + MIR SINE MIR 3 96 -166 2453 82 0 0 chr17 50270980 50271285 -39233268 - AluSx SINE Alu -7 305 1 1385 271 3 21 chr17 50271459 50271847 -39232706 + L1MDb LINE L1 13 393 -6016 2772 244 158 37 chr17 50271847 50273244 -39231309 + L2 LINE L2 1741 3304 -9 1685 195 10 7 chr17 50273548 50273840 -39230713 - AluJo SINE Alu -19 293 1 779 254 41 27 chr17 50274919 50275139 -39229414 - MIR SINE MIR -17 245 23 2040 122 7 3 chr17 50275815 50276102 -39228451 - AluSx SINE Alu -24 288 1 227 371 0 0 chr17 50276291 50276415 -39228138 + L1 LINE L1 4886 5009 -1137 2201 132 0 3 chr17 50276680 50276990 -39227563 + AluSq SINE Alu 4 312 -1 2013 132 7 0 chr17 50276994 50277274 -39227279 + AluSx SINE Alu 1 282 -30 216 0 0 0 chr17 50277277 50277301 -39227252 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2315 95 3 0 chr17 50277316 50277612 -39226941 - AluSp SINE Alu -16 297 1 637 157 197 7 chr17 50277674 50277821 -39226732 + MER20 DNA MER1_type 45 219 0 315 282 8 92 chr17 50278496 50278627 -39225926 - MIR3 SINE MIR -15 193 74 2170 95 7 0 chr17 50278671 50278966 -39225587 + AluSg SINE Alu 1 297 -13 2096 135 3 0 chr17 50279643 50279946 -39224607 - AluSq SINE Alu -9 304 1 2222 89 0 0 chr17 50280838 50281130 -39223423 + AluY SINE Alu 2 293 -18 636 295 54 9 chr17 50281616 50281933 -39222620 + MLT1G LTR MaLR 9 349 -206 396 283 14 55 chr17 50281948 50282093 -39222460 + L2 LINE L2 3171 3309 -4 22 35 0 0 chr17 50282303 50282332 -39222221 + AT_rich Low_complexity Low_complexity 1 29 0 228 212 41 151 chr17 50282584 50282730 -39221823 + L1ME LINE L1 5563 5692 -429 234 292 236 6 chr17 50282799 50282977 -39221576 + Charlie8 DNA MER1_type 31 249 -2168 687 185 6 70 chr17 50283081 50283238 -39221315 - MER5A DNA MER1_type -37 152 6 562 271 63 41 chr17 50283676 50283897 -39220656 - MIR SINE MIR -9 253 28 1986 116 51 7 chr17 50283901 50284194 -39220359 - AluSx SINE Alu -6 306 1 201 263 172 0 chr17 50284223 50284322 -39220231 + L2 LINE L2 2328 2443 -871 379 207 167 3 chr17 50285203 50285413 -39219140 - L1MC2 LINE L1 0 7785 6067 1298 249 154 43 chr17 50285496 50286263 -39218290 + L2 LINE L2 2339 3191 -122 1897 134 73 3 chr17 50286350 50286692 -39217861 - MER47A DNA MER2_type 0 366 1 9164 137 76 118 chr17 50287169 50287686 -39216867 + Tigger1 DNA MER2_type 23 560 -1858 2182 113 0 0 chr17 50287686 50287979 -39216574 + AluSx SINE Alu 5 297 -15 9164 137 76 118 chr17 50287979 50288704 -39215849 + Tigger1 DNA MER2_type 560 1314 -1104 907 138 0 0 chr17 50288704 50288842 -39215711 + FLAM_C SINE Alu 1 138 -5 9164 137 76 118 chr17 50288842 50289605 -39214948 + Tigger1 DNA MER2_type 1314 2049 -369 689 38 28 9 chr17 50289605 50289711 -39214842 + (GGGA)n Simple_repeat Simple_repeat 1 108 0 9164 137 76 118 chr17 50289711 50290067 -39214486 + Tigger1 DNA MER2_type 2049 2418 0 389 302 148 6 chr17 50290495 50290664 -39213889 - MIR SINE MIR -52 210 18 2173 84 46 0 chr17 50290758 50291043 -39213510 + AluSq SINE Alu 1 298 -15 251 143 102 0 chr17 50291984 50292033 -39212520 + U7 snRNA snRNA 2 55 -8 1751 148 3 24 chr17 50292081 50292378 -39212175 + AluJb SINE Alu 5 295 -17 794 191 0 0 chr17 50292572 50292703 -39211850 - FLAM_C SINE Alu -2 131 1 821 285 140 55 chr17 50292901 50293686 -39210867 - L2 LINE L2 -1 3312 2469 532 212 47 135 chr17 50294447 50294491 -39210062 + MER5B DNA MER1_type 1 47 -131 1908 164 0 3 chr17 50294491 50294795 -39209758 + AluJb SINE Alu 1 303 -9 532 212 47 135 chr17 50294795 50294943 -39209610 + MER5B DNA MER1_type 47 176 -2 217 361 111 9 chr17 50296176 50296284 -39208269 - L2 LINE L2 -32 3240 3122 2135 134 0 7 chr17 50296433 50296732 -39207821 + AluSc SINE Alu 1 297 -12 398 265 272 6 chr17 50296805 50296967 -39207586 + MIR SINE MIR 57 261 -1 180 236 109 18 chr17 50296976 50297031 -39207522 - L3 LINE CR1 -2 1575 1516 697 250 68 0 chr17 50297035 50297211 -39207342 + MER5A DNA MER1_type 2 189 0 1775 172 17 3 chr17 50297252 50297543 -39207010 + AluJb SINE Alu 1 295 -17 372 315 93 46 chr17 50297605 50297821 -39206732 - MIR SINE MIR -14 248 23 515 348 133 34 chr17 50298344 50298702 -39205851 - L2 LINE L2 -569 2745 2424 2284 107 3 0 chr17 50298702 50299011 -39205542 + AluSq SINE Alu 1 310 -3 515 348 133 34 chr17 50299011 50299144 -39205409 - L2 LINE L2 -890 2424 2306 2043 131 0 17 chr17 50299144 50299442 -39205111 + AluSx SINE Alu 1 293 -19 515 348 133 34 chr17 50299442 50299536 -39205017 - L2 LINE L2 -1008 2306 2101 483 243 55 33 chr17 50299757 50299938 -39204615 + L1MC5 LINE L1 7705 7889 -72 1410 153 87 42 chr17 50300129 50300417 -39204136 - AluJo SINE Alu -11 301 1 2236 72 41 14 chr17 50302181 50302474 -39202079 + AluY SINE Alu 2 302 -9 241 263 150 0 chr17 50302596 50302676 -39201877 - MIR SINE MIR -81 127 36 627 184 110 7 chr17 50302713 50302849 -39201704 + MER46A DNA MER2_type 1 150 -86 1570 172 56 0 chr17 50302859 50303162 -39201391 - MER2 DNA MER2_type -25 320 1 297 191 0 0 chr17 50303170 50303233 -39201320 + MER46A DNA MER2_type 174 236 0 198 307 13 40 chr17 50303694 50303769 -39200784 + L2 LINE L2 3234 3306 -7 232 299 22 58 chr17 50304136 50304273 -39200280 + MIR SINE MIR 16 147 -61 254 329 0 0 chr17 50304412 50304482 -39200071 + A-rich Low_complexity Low_complexity 4 73 0 228 195 0 0 chr17 50304661 50304702 -39199851 - L1ME4a LINE L1 -95 6026 5986 195 129 0 0 chr17 50304704 50304735 -39199818 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 1623 165 86 27 chr17 50304876 50305581 -39198972 + L1M4 LINE L1 4884 5620 -564 1338 149 5 9 chr17 50306468 50306683 -39197870 - AluSg/x SINE Alu -5 305 92 1418 172 52 30 chr17 50306919 50307187 -39197366 + AluJo SINE Alu 1 274 -38 198 0 0 0 chr17 50307199 50307221 -39197332 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 252 281 92 44 chr17 50307228 50307456 -39197097 + L1ME LINE L1 5379 5617 -504 1979 100 0 0 chr17 50307834 50308107 -39196446 + AluSq SINE Alu 37 309 0 2607 58 0 0 chr17 50308109 50308418 -39196135 + AluY SINE Alu 1 309 -2 308 263 88 35 chr17 50308440 50308554 -39195999 - MIR SINE MIR -73 135 16 1992 138 3 3 chr17 50310315 50310611 -39193942 - AluSx SINE Alu -11 301 6 321 329 18 55 chr17 50310850 50311014 -39193539 - MIR SINE MIR -69 193 36 2812 13 0 0 chr17 50311138 50311447 -39193106 + AluYa5 SINE Alu 1 309 -2 517 195 114 32 chr17 50311509 50311632 -39192921 + FLAM_A SINE Alu 1 133 0 23 0 0 0 chr17 50311640 50311663 -39192890 + AT_rich Low_complexity Low_complexity 1 23 0 1801 174 13 7 chr17 50311879 50312183 -39192370 + AluJb SINE Alu 1 306 -6 213 132 0 0 chr17 50312183 50312221 -39192332 + (GA)n Simple_repeat Simple_repeat 1 38 0 262 297 81 60 chr17 50312537 50312722 -39191831 + MIR SINE MIR 73 261 -1 1940 136 17 17 chr17 50313177 50313472 -39191081 - AluSx SINE Alu -17 295 1 21 0 0 0 chr17 50313484 50313505 -39191048 + AT_rich Low_complexity Low_complexity 1 21 0 2551 59 3 0 chr17 50313583 50313887 -39190666 - AluY SINE Alu -6 305 1 1160 197 5 5 chr17 50314010 50314228 -39190325 - MER58A DNA MER1_type 0 224 7 2195 67 0 88 chr17 50314312 50314610 -39189943 + AluY SINE Alu 1 269 -42 194 0 39 0 chr17 50314610 50314636 -39189917 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2195 67 0 88 chr17 50314636 50314668 -39189885 + AluY SINE Alu 269 302 -9 1133 274 60 50 chr17 50315796 50316277 -39188276 + L2 LINE L2 2828 3313 0 522 274 48 6 chr17 50316486 50316654 -39187899 - MER5B DNA MER1_type 0 178 4 1392 143 4 13 chr17 50318936 50319166 -39185387 - AluJb SINE Alu -82 230 3 407 181 255 11 chr17 50319447 50319541 -39185012 - FLAM_C SINE Alu -19 124 8 2197 119 17 0 chr17 50319742 50320044 -39184509 - AluSx SINE Alu -5 307 1 751 227 10 31 chr17 50320071 50320265 -39184288 + MER20 DNA MER1_type 30 219 0 803 248 0 0 chr17 50320373 50320530 -39184023 + FRAM SINE Alu 1 157 -19 2136 112 3 3 chr17 50320654 50320940 -39183613 + AluSx SINE Alu 4 289 -23 23 0 0 0 chr17 50321176 50321199 -39183354 + AT_rich Low_complexity Low_complexity 1 23 0 432 109 0 0 chr17 50321211 50321275 -39183278 - FLAM_A SINE Alu -26 116 53 1134 134 0 0 chr17 50321339 50321503 -39183050 + AluSg/x SINE Alu 137 300 -12 1051 127 18 24 chr17 50322950 50323116 -39181437 - AluSg/x SINE Alu -14 298 134 2322 109 0 0 chr17 50323116 50323427 -39181126 - AluSx SINE Alu -1 311 1 233 270 32 16 chr17 50324656 50324719 -39179834 + MIR SINE MIR 82 145 -117 1759 139 21 7 chr17 50324895 50325176 -39179377 - AluJb SINE Alu -23 289 5 416 259 145 21 chr17 50325462 50325655 -39178898 + MIR SINE MIR 46 262 0 2194 79 0 70 chr17 50325719 50326035 -39178518 + AluY SINE Alu 1 294 -17 23 0 0 0 chr17 50327030 50327053 -39177500 + AT_rich Low_complexity Low_complexity 1 23 0 546 304 203 55 chr17 50327074 50327857 -39176696 + L2 LINE L2 2396 3272 0 864 206 6 0 chr17 50327952 50328112 -39176441 - FRAM SINE Alu -15 161 1 202 161 0 0 chr17 50328593 50328624 -39175929 - MIR SINE MIR -26 236 206 967 188 6 11 chr17 50329527 50329695 -39174858 + AluJb SINE Alu 118 286 -26 189 74 0 0 chr17 50329695 50329722 -39174831 + (CATA)n Simple_repeat Simple_repeat 2 28 0 967 188 6 11 chr17 50329722 50329734 -39174819 + AluJb SINE Alu 286 297 -15 2311 68 0 7 chr17 50329805 50330097 -39174456 - AluY SINE Alu 0 311 22 2121 134 0 0 chr17 50330099 50330397 -39174156 - AluSx SINE Alu -14 298 1 2212 103 0 10 chr17 50330515 50330815 -39173738 + AluSx SINE Alu 1 297 -15 2235 111 0 0 chr17 50330816 50331114 -39173439 + AluSq SINE Alu 1 298 -15 250 270 0 0 chr17 50331592 50331655 -39172898 + A-rich Low_complexity Low_complexity 1 63 0 2249 84 10 13 chr17 50332938 50333237 -39171316 - AluSp SINE Alu -15 298 1 1325 127 0 78 chr17 50334485 50334729 -39169824 + AluSg SINE Alu 49 273 -37 227 54 27 0 chr17 50334733 50334770 -39169783 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 372 275 180 37 chr17 50337373 50337828 -39166725 + L2 LINE L2 1594 2113 -1201 3166 190 70 75 chr17 50338095 50338793 -39165760 + Charlie1a DNA MER1_type 1 694 -2067 2121 109 0 0 chr17 50338793 50339067 -39165486 - AluSc SINE Alu -33 276 3 3166 190 70 75 chr17 50339067 50339258 -39165295 + Charlie1a DNA MER1_type 694 885 -570 1591 169 71 0 chr17 50339275 50339542 -39165011 - AluJb SINE Alu -26 286 1 22 0 0 0 chr17 50339550 50339572 -39164981 + AT_rich Low_complexity Low_complexity 1 22 0 310 188 0 29 chr17 50339599 50339668 -39164885 + Charlie1a DNA MER1_type 1389 1455 0 477 0 0 0 chr17 50339897 50339950 -39164603 + (TG)n Simple_repeat Simple_repeat 2 54 0 2091 126 0 0 chr17 50339950 50340236 -39164317 - AluSx SINE Alu -26 286 1 22 56 0 0 chr17 50340404 50340440 -39164113 + AT_rich Low_complexity Low_complexity 1 36 0 2248 117 0 0 chr17 50340995 50341295 -39163258 + AluSq SINE Alu 1 300 -13 278 293 218 11 chr17 50341651 50341839 -39162714 + MIR SINE MIR 20 246 -16 432 205 218 35 chr17 50342015 50342205 -39162348 + L1ME4a LINE L1 5708 5933 -188 231 227 15 0 chr17 50342220 50342286 -39162267 + L1ME4a LINE L1 6044 6110 -11 2428 70 0 7 chr17 50342364 50342663 -39161890 - AluY SINE Alu -14 297 1 189 179 39 115 chr17 50342924 50343002 -39161551 - MIR SINE MIR -65 197 126 193 313 60 0 chr17 50343439 50343506 -39161047 + L3b LINE CR1 1513 1583 0 778 234 42 37 chr17 50343581 50343795 -39160758 - MER20 DNA MER1_type -1 218 4 2128 109 20 3 chr17 50344373 50344666 -39159887 + AluSq SINE Alu 1 298 -15 2173 127 0 6 chr17 50344800 50345115 -39159438 + AluSq SINE Alu 1 313 0 1080 164 0 0 chr17 50345118 50345295 -39159258 + AluSg/x SINE Alu 129 305 -7 851 163 0 0 chr17 50345304 50345433 -39159120 + FLAM_C SINE Alu 1 129 -4 227 206 32 0 chr17 50345433 50345496 -39159057 + L1MCa LINE L1 2019 2083 -4343 216 379 56 19 chr17 50345522 50345683 -39158870 - L2 LINE L2 -586 2728 2562 275 369 0 0 chr17 50345865 50345949 -39158604 + L2 LINE L2 2553 2636 -678 2212 104 0 7 chr17 50346020 50346318 -39158235 - AluSq SINE Alu -17 296 1 194 316 105 38 chr17 50346412 50346545 -39158008 + L2 LINE L2 2919 3060 -212 760 223 163 5 chr17 50347208 50347423 -39157130 - MIR SINE MIR -7 255 7 237 349 0 0 chr17 50347670 50347733 -39156820 - L2 LINE L2 -215 3057 2995 602 164 109 0 chr17 50347733 50347843 -39156710 + FLAM_A SINE Alu 1 122 -11 1283 184 169 12 chr17 50347884 50348139 -39156414 + AluJb SINE Alu 1 295 -7 250 230 35 9 chr17 50348139 50348252 -39156301 + GA-rich Low_complexity Low_complexity 4 119 0 1619 138 154 0 chr17 50348255 50348515 -39156038 + AluSx SINE Alu 1 300 -2 226 238 32 32 chr17 50348774 50348837 -39155716 - L2 LINE L2 -210 3062 3000 271 286 36 113 chr17 50349210 50349424 -39155129 + L2 LINE L2 2965 3151 -121 1927 121 45 7 chr17 50349424 50349713 -39154840 - AluSg SINE Alu -10 300 1 271 286 36 113 chr17 50349713 50349799 -39154754 + L2 LINE L2 3151 3242 -30 373 263 77 26 chr17 50350045 50350201 -39154352 + L1MC/D LINE L1 5579 5742 -2066 468 150 0 0 chr17 50350241 50350321 -39154232 + (CA)n Simple_repeat Simple_repeat 2 81 0 683 205 8 8 chr17 50350327 50350449 -39154104 + FLAM_C SINE Alu 2 123 -20 2284 78 0 29 chr17 50350680 50350988 -39153565 + AluY SINE Alu 1 299 -12 2234 82 16 26 chr17 50351314 50351618 -39152935 - AluSx SINE Alu -11 301 1 22 0 0 0 chr17 50352546 50352568 -39151985 + AT_rich Low_complexity Low_complexity 1 22 0 2213 105 6 6 chr17 50353335 50353648 -39150905 + AluSq SINE Alu 1 313 0 558 187 72 102 chr17 50353670 50353836 -39150717 + FAM SINE Alu 1 42 -7 2050 104 0 74 chr17 50354187 50354513 -39150040 + AluSx SINE Alu 1 302 -10 227 226 12 48 chr17 50357318 50357402 -39147151 + GA-rich Low_complexity Low_complexity 5 85 0 39 68 0 0 chr17 50357473 50357547 -39147006 + GC_rich Low_complexity Low_complexity 1 74 0 23 33 0 0 chr17 50357712 50357742 -39146811 + GC_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr17 50357856 50357880 -39146673 + GC_rich Low_complexity Low_complexity 1 24 0 183 80 0 0 chr17 50358017 50358042 -39146511 + (CGAG)n Simple_repeat Simple_repeat 2 26 0 51 42 0 0 chr17 50358112 50358184 -39146369 + GC_rich Low_complexity Low_complexity 1 72 0 23 0 0 0 chr17 50358740 50358763 -39145790 + GC_rich Low_complexity Low_complexity 1 23 0 1212 138 149 46 chr17 50360157 50360418 -39144135 - AluJo SINE Alu -18 294 7 1720 168 33 13 chr17 50360546 50360850 -39143703 + AluJb SINE Alu 1 310 -2 275 119 24 0 chr17 50360926 50360968 -39143585 + MLT1L LTR MaLR 169 211 -404 344 223 131 97 chr17 50361108 50361283 -39143270 + MLT1L LTR MaLR 374 577 -34 1756 160 3 26 chr17 50361411 50361718 -39142835 + AluJo SINE Alu 1 300 -12 183 156 0 0 chr17 50361718 50361750 -39142803 + GA-rich Low_complexity Low_complexity 1 32 0 2173 116 0 0 chr17 50361947 50362239 -39142314 + AluSx SINE Alu 1 292 -20 251 346 77 0 chr17 50362615 50362719 -39141834 + L2 LINE L2 3201 3312 -1 415 271 181 0 chr17 50362723 50362867 -39141686 + MIR SINE MIR 4 173 -89 243 0 0 0 chr17 50363009 50363036 -39141517 + (A)n Simple_repeat Simple_repeat 1 27 0 2010 152 0 0 chr17 50363038 50363328 -39141225 + AluSx SINE Alu 3 292 -20 190 382 140 0 chr17 50363718 50363854 -39140699 - MIR3 SINE MIR -53 155 1 252 0 0 0 chr17 50364625 50364653 -39139900 + (CA)n Simple_repeat Simple_repeat 2 29 0 2219 95 0 0 chr17 50365047 50365332 -39139221 + AluY SINE Alu 1 285 -26 21 0 0 0 chr17 50365332 50365353 -39139200 + AT_rich Low_complexity Low_complexity 1 21 0 2124 109 3 26 chr17 50365496 50365798 -39138755 - AluSx SINE Alu -17 295 1 1949 128 48 37 chr17 50365994 50366176 -39138377 + MER46B DNA MER2_type 1 65 -2666 1659 177 0 50 chr17 50366176 50366315 -39138238 + AluJo SINE Alu 1 145 -167 1555 201 10 3 chr17 50366315 50366608 -39137945 + AluJb SINE Alu 3 297 -15 1659 177 0 50 chr17 50366608 50366790 -39137763 + AluJo SINE Alu 145 306 -6 1949 128 48 37 chr17 50366790 50366960 -39137593 + MER46B DNA MER2_type 65 232 -4 2018 108 7 33 chr17 50367536 50367843 -39136710 + AluSx SINE Alu 1 299 -13 1071 201 126 47 chr17 50368482 50368760 -39135793 + AluJo SINE Alu 3 302 0 1981 133 7 33 chr17 50368761 50369062 -39135491 + AluSx SINE Alu 1 293 -19 5759 171 66 131 chr17 50369170 50369986 -39134567 + L1M4 LINE L1 3617 4484 -1662 2262 117 3 0 chr17 50369986 50370285 -39134268 + AluSx SINE Alu 1 300 -12 5759 171 66 131 chr17 50370285 50370382 -39134171 + L1M4 LINE L1 4484 4586 -1560 1612 213 3 16 chr17 50370382 50370697 -39133856 + AluJo SINE Alu 1 311 -1 5759 171 66 131 chr17 50370697 50371030 -39133523 + L1M4 LINE L1 4586 4939 -1207 784 169 15 8 chr17 50371030 50371160 -39133393 + FLAM_C SINE Alu 1 131 -12 5759 171 66 131 chr17 50371160 50371587 -39132966 + L1M4 LINE L1 4939 5294 -852 1177 179 90 90 chr17 50371587 50371816 -39132737 + AluJo SINE Alu 1 232 -70 2396 95 0 0 chr17 50371816 50372121 -39132432 + AluSg1 SINE Alu 1 305 -4 1177 179 90 90 chr17 50372121 50372181 -39132372 + AluJo SINE Alu 231 290 -12 5759 171 66 131 chr17 50372181 50372282 -39132271 + L1M4 LINE L1 5294 5400 -746 905 150 0 0 chr17 50372282 50372415 -39132138 + AluJb SINE Alu 1 133 -179 2199 111 6 16 chr17 50372415 50372730 -39131823 + AluSq SINE Alu 1 312 -1 243 189 36 171 chr17 50372866 50372916 -39131637 + MLT1B LTR MaLR 1 30 -360 1759 156 16 32 chr17 50372916 50373224 -39131329 + AluJo SINE Alu 1 303 -9 243 189 36 171 chr17 50373224 50373284 -39131269 + MLT1B LTR MaLR 30 96 -294 702 116 18 0 chr17 50373343 50373455 -39131098 + AluSg/x SINE Alu 182 295 -14 2150 100 0 42 chr17 50373477 50373786 -39130767 + AluSq SINE Alu 3 298 -15 2187 129 0 0 chr17 50374078 50374380 -39130173 - AluSx SINE Alu -10 302 1 2486 74 0 6 chr17 50374778 50375089 -39129464 + AluSc SINE Alu 1 309 0 574 311 90 32 chr17 50375329 50375606 -39128947 + L3 LINE CR1 1132 1424 -153 1619 104 40 5 chr17 50375877 50376099 -39128454 + MER30 DNA MER1_type 1 230 0 1008 261 111 42 chr17 50376748 50376811 -39127742 - L1ME4a LINE L1 -217 5904 5847 2232 109 0 0 chr17 50376811 50377105 -39127448 - AluSc SINE Alu -15 294 1 1008 261 111 42 chr17 50377105 50377584 -39126969 - L1ME4a LINE L1 -274 5847 5325 2284 75 0 26 chr17 50377862 50378194 -39126359 - AluY SINE Alu 0 311 1 2198 108 0 3 chr17 50378221 50378516 -39126037 + AluSx SINE Alu 1 294 -18 2377 89 0 3 chr17 50378958 50379262 -39125291 + AluSq SINE Alu 1 303 -10 399 218 89 8 chr17 50379454 50379578 -39124975 - L1MC/D LINE L1 -2342 5466 5333 807 80 0 0 chr17 50379658 50379758 -39124795 - HY3 scRNA scRNA -1 100 1 531 340 120 38 chr17 50379994 50380345 -39124208 - L2 LINE L2 -586 2728 2407 2280 113 3 0 chr17 50380345 50380656 -39123897 + AluSx SINE Alu 1 312 0 531 340 120 38 chr17 50380656 50380912 -39123641 - L2 LINE L2 -907 2407 2071 2196 84 52 0 chr17 50380917 50381203 -39123350 + AluSq SINE Alu 1 301 -12 749 131 8 157 chr17 50381360 50381409 -39123144 + MLT1B LTR MaLR 1 56 -334 1846 146 16 36 chr17 50381409 50381718 -39122835 + AluJo SINE Alu 1 303 -9 749 131 8 157 chr17 50381718 50381780 -39122773 + MLT1B LTR MaLR 56 126 -264 2024 148 17 0 chr17 50381780 50382070 -39122483 + AluSx SINE Alu 1 295 -17 749 131 8 157 chr17 50382070 50382193 -39122360 + MLT1B LTR MaLR 126 201 -189 1029 110 0 0 chr17 50382193 50382329 -39122224 + AluJb SINE Alu 1 136 -176 2131 134 0 3 chr17 50382329 50382627 -39121926 + AluSx SINE Alu 1 297 -15 705 200 73 12 chr17 50382669 50382834 -39121719 + MLT1B LTR MaLR 286 460 -7 672 232 6 42 chr17 50382862 50383030 -39121523 - MIR SINE MIR -24 238 77 2362 89 0 0 chr17 50383092 50383383 -39121170 + AluSx SINE Alu 6 296 -16 431 264 176 0 chr17 50383416 50383564 -39120989 - MIR SINE MIR -32 230 57 2058 102 58 14 chr17 50383565 50383860 -39120693 + AluSq SINE Alu 1 308 -5 1801 154 3 45 chr17 50383941 50384252 -39120301 - AluJb SINE Alu -14 298 1 2565 75 0 0 chr17 50384408 50384716 -39119837 + AluY SINE Alu 1 308 -3 2603 47 0 0 chr17 50384806 50385102 -39119451 - AluY SINE Alu -15 296 1 2108 128 0 3 chr17 50385285 50385574 -39118979 - AluSx SINE Alu -24 288 1 335 284 7 47 chr17 50385590 50385738 -39118815 - L1MC4a LINE L1 -1826 5982 5841 26 30 0 0 chr17 50387438 50387471 -39117082 + AT_rich Low_complexity Low_complexity 1 33 0 262 368 66 39 chr17 50388829 50389011 -39115542 + L3b LINE CR1 1388 1574 -9 25 0 0 0 chr17 50389119 50389144 -39115409 + AT_rich Low_complexity Low_complexity 1 25 0 38 0 0 0 chr17 50389593 50389631 -39114922 + GC_rich Low_complexity Low_complexity 1 38 0 32 57 0 0 chr17 50389756 50389809 -39114744 + GC_rich Low_complexity Low_complexity 1 53 0 216 122 0 0 chr17 50390093 50390134 -39114419 + (TCTCTG)n Simple_repeat Simple_repeat 3 43 0 236 343 68 32 chr17 50390727 50390946 -39113607 - L2 LINE L2 -914 2400 2174 2310 96 3 16 chr17 50391081 50391395 -39113158 + AluSx SINE Alu 1 310 -2 2060 85 100 0 chr17 50391480 50391761 -39112792 + AluSg SINE Alu 1 309 -1 379 144 22 56 chr17 50391843 50391933 -39112620 + MIR SINE MIR 119 205 -57 2436 72 3 3 chr17 50391937 50392243 -39112310 - AluY SINE Alu -5 306 1 1783 161 13 16 chr17 50392272 50392612 -39111941 + AluJb SINE Alu 1 312 0 2390 77 27 0 chr17 50392865 50393165 -39111388 + AluSc SINE Alu 1 308 -1 22 0 0 0 chr17 50393241 50393263 -39111290 + AT_rich Low_complexity Low_complexity 1 22 0 264 108 0 0 chr17 50393264 50393301 -39111252 - MER4E LTR ERV1 -76 703 667 181 242 0 0 chr17 50393368 50393401 -39111152 - L2 LINE L2 -25 3247 3215 1925 155 3 0 chr17 50393568 50393859 -39110694 + AluJo SINE Alu 1 292 -20 294 54 0 0 chr17 50393888 50393925 -39110628 + tRNA-Tyr-TAC tRNA tRNA 2 38 -38 277 278 176 19 chr17 50394118 50394226 -39110327 + MIR SINE MIR 63 187 -75 306 0 0 0 chr17 50394285 50394319 -39110234 + (TA)n Simple_repeat Simple_repeat 2 35 0 336 202 35 9 chr17 50394699 50394813 -39109740 - HAL1 LINE L1 -1420 1087 971 412 136 0 0 chr17 50394843 50394909 -39109644 - Alu SINE Alu -9 301 236 1627 168 0 7 chr17 50394910 50395184 -39109369 + AluJo SINE Alu 38 309 -3 232 362 121 0 chr17 50395187 50395303 -39109250 - L2 LINE L2 -21 3251 3122 250 275 21 39 chr17 50395448 50395489 -39109064 - MER5A DNA MER1_type -2 187 147 1866 148 3 75 chr17 50395489 50395615 -39108938 + AluSx SINE Alu 1 135 -177 2676 42 7 3 chr17 50395615 50395923 -39108630 - AluY SINE Alu -2 309 1 1866 148 3 75 chr17 50395923 50396128 -39108425 + AluSx SINE Alu 135 308 -4 250 275 21 39 chr17 50396128 50396228 -39108325 - MER5A DNA MER1_type -42 147 1 785 327 77 43 chr17 50396285 50396725 -39107828 - L2 LINE L2 -545 2769 2315 2363 88 7 0 chr17 50396753 50397048 -39107505 + AluSq SINE Alu 1 297 -16 2028 133 17 0 chr17 50397146 50397439 -39107114 + AluSx SINE Alu 1 298 -14 739 132 28 0 chr17 50397440 50397546 -39107007 + AluSx SINE Alu 2 110 -203 1509 117 0 0 chr17 50397590 50397786 -39106767 + AluSx SINE Alu 105 300 -10 359 178 22 33 chr17 50397786 50397876 -39106677 - AluJo/FLAM SINE Alu -172 130 42 759 236 6 6 chr17 50397942 50398103 -39106450 + FRAM SINE Alu 1 159 -17 446 210 57 45 chr17 50398111 50398169 -39106384 - HAL1 LINE L1 -1359 1148 1092 2180 138 0 0 chr17 50398169 50398474 -39106079 - AluSx SINE Alu -7 305 1 446 210 57 45 chr17 50398474 50398591 -39105962 - HAL1 LINE L1 -1415 1092 971 1288 135 0 96 chr17 50398619 50398803 -39105750 - AluSg/x SINE Alu -9 303 144 2279 116 13 0 chr17 50398803 50399106 -39105447 - AluSx SINE Alu 0 312 6 1288 135 0 96 chr17 50399106 50399150 -39105403 - AluSg/x SINE Alu -168 144 97 435 113 0 14 chr17 50399172 50399243 -39105310 - L1M4 LINE L1 -511 5667 5598 2875 208 39 58 chr17 50399245 50399313 -39105240 - L1M4 LINE L1 -1040 5106 5038 1454 98 0 56 chr17 50399313 50399358 -39105195 + AluSc SINE Alu 90 136 -173 2401 80 3 7 chr17 50399358 50399659 -39104894 + AluSp SINE Alu 1 300 -13 1454 98 0 56 chr17 50399659 50399828 -39104725 + AluSc SINE Alu 136 292 -17 2875 208 39 58 chr17 50399828 50400044 -39104509 - L1M4 LINE L1 -1108 5038 4819 1579 153 50 60 chr17 50400044 50400192 -39104361 + AluJb SINE Alu 1 149 -163 2264 105 3 3 chr17 50400192 50400486 -39104067 + AluSp SINE Alu 1 294 -19 1579 153 50 60 chr17 50400486 50400637 -39103916 + AluJb SINE Alu 149 297 -15 2875 208 39 58 chr17 50400637 50401141 -39103412 - L1M4 LINE L1 -1327 4819 4332 897 233 12 6 chr17 50401141 50401313 -39103240 + FAM SINE Alu 1 173 -2 2875 208 39 58 chr17 50401313 50401374 -39103179 - L1M4 LINE L1 -1814 4332 4271 2537 66 0 0 chr17 50401389 50401690 -39102863 + AluY SINE Alu 1 301 -10 369 191 76 9 chr17 50401766 50401871 -39102682 - L1M4 LINE L1 -1712 4434 4323 1662 121 9 0 chr17 50401873 50402105 -39102448 - AluSg1 SINE Alu 0 310 77 189 159 0 0 chr17 50402109 50402153 -39102400 + T-rich Low_complexity Low_complexity 1 44 0 5910 31 0 6 chr17 50402161 50402812 -39101741 - SVA Other Other 0 1386 740 685 130 0 0 chr17 50402812 50402904 -39101649 - AluSg1 SINE Alu -216 93 2 1297 206 21 0 chr17 50402908 50403190 -39101363 - L1M4 LINE L1 -1826 4320 4033 2004 115 0 81 chr17 50403199 50403351 -39101202 + AluSx SINE Alu 1 115 -197 2135 101 3 42 chr17 50403351 50403659 -39100894 + AluY SINE Alu 1 296 -15 2004 115 0 81 chr17 50403659 50403828 -39100725 + AluSx SINE Alu 115 296 -16 942 232 49 42 chr17 50403835 50403989 -39100564 + MLT1A2 LTR MaLR 88 239 -135 2801 159 2 58 chr17 50403989 50404162 -39100391 + MER66B LTR ERV1 1 182 -304 2245 108 0 0 chr17 50404162 50404450 -39100103 - AluSg SINE Alu -22 288 1 2801 159 2 58 chr17 50404450 50404686 -39099867 + MER66B LTR ERV1 182 378 -108 1949 136 39 7 chr17 50404686 50404972 -39099581 + AluSx SINE Alu 1 295 -17 2801 159 2 58 chr17 50404972 50405076 -39099477 + MER66B LTR ERV1 378 486 0 942 232 49 42 chr17 50405076 50405206 -39099347 + MLT1A2 LTR MaLR 239 374 0 26 0 0 0 chr17 50405329 50405355 -39099198 + AT_rich Low_complexity Low_complexity 1 26 0 1958 126 22 0 chr17 50405355 50405681 -39098872 + AluSx SINE Alu 1 332 0 730 153 7 62 chr17 50405682 50405826 -39098727 + FLAM_C SINE Alu 1 136 -7 2343 117 3 0 chr17 50405829 50406138 -39098415 + AluSp SINE Alu 1 310 -3 1733 167 6 45 chr17 50406234 50406546 -39098007 + AluJo SINE Alu 1 300 -12 2169 104 0 0 chr17 50406722 50407001 -39097552 - AluSg1 SINE Alu -1 308 30 1482 174 0 12 chr17 50407001 50407242 -39097311 - AluJb SINE Alu -45 267 30 1023 153 167 14 chr17 50407323 50407538 -39097015 - MER21B LTR ERV1 -615 248 1 249 254 101 80 chr17 50407547 50407685 -39096868 + L2 LINE L2 3171 3311 -2 342 230 32 8 chr17 50407793 50407919 -39096634 + GA-rich Low_complexity Low_complexity 4 132 0 672 207 6 11 chr17 50407930 50408109 -39096444 + GA-rich Low_complexity Low_complexity 1 178 0 221 140 60 0 chr17 50408135 50408185 -39096368 + A-rich Low_complexity Low_complexity 4 56 0 21 0 0 0 chr17 50408195 50408216 -39096337 + GC_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr17 50408302 50408336 -39096217 + GC_rich Low_complexity Low_complexity 1 34 0 228 67 0 0 chr17 50410374 50410404 -39094149 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 * 482 128 0 12 chr17 50410402 50410488 -39094065 + (GGGA)n Simple_repeat Simple_repeat 4 88 0 180 241 0 0 chr17 50410493 50410551 -39094002 + A-rich Low_complexity Low_complexity 109 166 0 696 258 91 10 chr17 50410598 50410796 -39093757 + MIR SINE MIR 49 262 0 514 294 75 7 chr17 50410990 50411136 -39093417 - L2 LINE L2 0 3272 3117 2112 107 0 0 chr17 50411345 50411647 -39092906 + AluSx SINE Alu 10 311 0 1822 155 18 58 chr17 50412822 50413113 -39091440 - L1ME1 LINE L1 -5 6161 5860 2251 109 7 0 chr17 50413113 50413406 -39091147 - AluSx SINE Alu -17 295 1 1822 155 18 58 chr17 50413406 50413466 -39091087 - L1ME1 LINE L1 -306 5860 5825 938 224 180 14 chr17 50413466 50413761 -39090792 - MER2 DNA MER2_type 0 344 1 1822 155 18 58 chr17 50413761 50413801 -39090752 - L1ME1 LINE L1 -341 5825 5785 886 139 0 0 chr17 50413801 50413923 -39090630 + AluSg/x SINE Alu 102 223 -87 334 339 109 9 chr17 50413939 50414169 -39090384 + L2 LINE L2 1852 2104 -1210 2163 98 31 3 chr17 50414397 50414683 -39089870 - AluSx SINE Alu -18 294 1 961 129 8 0 chr17 50414685 50414817 -39089736 - AluSq/x SINE Alu -180 133 1 3502 54 35 0 chr17 50414911 50415339 -39089214 + MLT2A1 LTR ERVL 1 443 -1 484 153 0 0 chr17 50415339 50415411 -39089142 + AluJ/FLAM SINE Alu 7 78 -234 364 255 11 0 chr17 50415411 50415603 -39088950 - AluJb SINE Alu 0 399 207 717 112 0 0 chr17 50415604 50415702 -39088851 + AluJo/FRAM SINE Alu 202 299 -13 413 195 278 24 chr17 50415763 50415845 -39088708 + MER20 DNA MER1_type 3 63 -156 2376 94 3 0 chr17 50415845 50416144 -39088409 - AluSp SINE Alu -13 300 1 413 195 278 24 chr17 50416144 50416230 -39088323 + MER20 DNA MER1_type 63 214 -5 986 167 13 0 chr17 50416801 50416951 -39087602 - AluSg/x SINE Alu -20 290 139 10334 54 26 47 chr17 50416960 50418375 -39086178 - SVA Other Other 0 1386 1 303 355 0 0 chr17 50418663 50418773 -39085780 + ERVL LTR ERVL 4372 4481 -1283 644 314 0 0 chr17 50418777 50418971 -39085582 + ERVL LTR ERVL 4777 4970 -794 359 40 0 20 chr17 50418974 50419024 -39085529 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 932 180 32 55 chr17 50419053 50419132 -39085421 - AluJb SINE Alu -100 212 133 2169 104 7 0 chr17 50419132 50419419 -39085134 - AluSg SINE Alu -16 294 6 185 0 40 0 chr17 50419419 50419444 -39085109 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2206 101 14 0 chr17 50419446 50419722 -39084831 - AluSx SINE Alu -32 280 1 932 180 32 55 chr17 50419722 50419855 -39084698 - AluJb SINE Alu -179 133 1 2395 95 3 3 chr17 50419947 50420252 -39084301 - AluSp SINE Alu -8 305 1 2560 66 0 0 chr17 50420258 50420561 -39083992 - AluY SINE Alu -8 303 1 1089 198 34 74 chr17 50420565 50420700 -39083853 + MLT1A1 LTR MaLR 26 165 -200 1989 113 0 48 chr17 50420700 50421010 -39083543 + AluSx SINE Alu 12 306 -6 1089 198 34 74 chr17 50421010 50421197 -39083356 + MLT1A1 LTR MaLR 165 335 -30 558 211 115 19 chr17 50421590 50421746 -39082807 + MIR SINE MIR 18 188 -74 2367 94 0 19 chr17 50421751 50422060 -39082493 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr17 50422081 50422105 -39082448 + AT_rich Low_complexity Low_complexity 1 24 0 1747 175 3 26 chr17 50422118 50422421 -39082132 + AluJo SINE Alu 1 296 -16 1264 212 87 6 chr17 50422425 50422746 -39081807 - MLT1F1 LTR MaLR -33 534 188 1352 101 0 42 chr17 50422783 50422803 -39081750 + L1PB1 LINE L1 5662 5681 -470 2379 96 0 0 chr17 50422803 50423095 -39081458 - AluSc SINE Alu -17 292 1 1352 101 0 42 chr17 50423095 50423291 -39081262 + L1PB1 LINE L1 5681 5869 -282 2521 77 0 13 chr17 50423291 50423604 -39080949 - AluY SINE Alu -2 309 1 306 0 0 0 chr17 50423606 50423640 -39080913 + (T)n Simple_repeat Simple_repeat 1 34 0 2496 69 3 0 chr17 50425202 50425505 -39079048 - AluSp SINE Alu -5 308 5 2075 102 0 3 chr17 50425511 50425804 -39078749 + L1PB1 LINE L1 5858 6149 -2 465 278 25 37 chr17 50425827 50425989 -39078564 - MLT1F1 LTR MaLR -382 160 1 2266 105 0 3 chr17 50426003 50426299 -39078254 - AluSx SINE Alu -17 295 1 361 322 41 7 chr17 50426322 50426468 -39078085 + L1MC4 LINE L1 7892 8042 0 1993 168 0 0 chr17 50426533 50426836 -39077717 - AluSx SINE Alu -9 303 1 988 209 0 72 chr17 50426837 50426946 -39077607 - AluJo SINE Alu -94 218 133 231 36 0 0 chr17 50426946 50426974 -39077579 + (TTC)n Simple_repeat Simple_repeat 2 29 0 988 209 0 72 chr17 50426974 50427099 -39077454 - AluJo SINE Alu -179 133 1 1201 83 6 0 chr17 50427246 50427402 -39077151 + AluSp/q SINE Alu 157 313 0 1607 169 7 21 chr17 50427519 50427832 -39076721 + AluJb SINE Alu 3 311 0 2341 109 3 0 chr17 50427856 50428159 -39076394 + AluSx SINE Alu 1 304 -8 2350 103 3 0 chr17 50428159 50428461 -39076092 + AluSp SINE Alu 1 303 -10 874 120 0 0 chr17 50428466 50428583 -39075970 - AluSq/x SINE Alu -195 117 1 191 35 0 35 chr17 50428597 50428626 -39075927 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 649 155 164 0 chr17 50428733 50428849 -39075704 - FLAM_C SINE Alu -7 136 2 207 156 0 0 chr17 50428871 50428903 -39075650 + L2 LINE L2 3272 3303 -10 1099 103 6 6 chr17 50429833 50430007 -39074546 + (TTC)n Simple_repeat Simple_repeat 1 174 0 475 106 12 12 chr17 50429970 50430055 -39074498 + (TCC)n Simple_repeat Simple_repeat 1 85 0 2056 133 16 10 chr17 50430055 50430364 -39074189 - AluJb SINE Alu -1 311 1 1698 121 0 0 chr17 50430402 50430633 -39073920 + AluSx SINE Alu 2 232 -80 21 36 0 0 chr17 50431431 50431459 -39073094 + GC_rich Low_complexity Low_complexity 1 28 0 221 207 60 9 chr17 50431503 50431619 -39072934 + (CCGCG)n Simple_repeat Simple_repeat 1 122 0 27 0 0 0 chr17 50431743 50431770 -39072783 + GC_rich Low_complexity Low_complexity 1 27 0 1247 94 6 6 chr17 50432480 50432651 -39071902 - AluSx SINE Alu -5 307 137 1073 92 7 7 chr17 50432762 50432904 -39071649 - AluSx SINE Alu -170 142 1 23 0 0 0 chr17 50433567 50433590 -39070963 + AT_rich Low_complexity Low_complexity 1 23 0 2239 70 42 0 chr17 50433838 50434122 -39070431 + AluSp SINE Alu 1 296 -17 24 0 0 0 chr17 50434154 50434178 -39070375 + AT_rich Low_complexity Low_complexity 1 24 0 2095 118 24 0 chr17 50435213 50435501 -39069052 + AluSg SINE Alu 1 295 -15 2160 115 0 50 chr17 50435747 50436068 -39068485 - AluSp SINE Alu -8 305 1 2032 135 3 3 chr17 50436357 50436646 -39067907 - AluSg SINE Alu -21 289 1 2336 100 0 3 chr17 50436993 50437302 -39067251 - AluSq SINE Alu -5 308 1 185 65 32 0 chr17 50438383 50438414 -39066139 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2378 100 3 0 chr17 50439468 50439777 -39064776 - AluSp SINE Alu -2 311 2 192 77 0 0 chr17 50440327 50440353 -39064200 + (TG)n Simple_repeat Simple_repeat 2 27 0 2367 84 3 0 chr17 50440481 50440777 -39063776 - AluSq SINE Alu -16 297 1 2226 121 0 10 chr17 50441377 50441691 -39062862 - AluJb SINE Alu -1 311 1 2101 128 30 3 chr17 50442223 50442528 -39062025 - AluSq SINE Alu 0 313 1 2179 108 3 7 chr17 50442536 50442832 -39061721 - AluSx SINE Alu -17 295 1 321 68 0 0 chr17 50442953 50442997 -39061556 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2233 106 0 0 chr17 50443005 50443288 -39061265 - AluSg1 SINE Alu -26 283 1 2245 122 0 0 chr17 50443381 50443684 -39060869 - AluSq SINE Alu -10 303 1 641 258 158 97 chr17 50443689 50443759 -39060794 - HAL1 LINE L1 -353 2154 2090 2259 135 0 0 chr17 50443759 50444070 -39060483 - AluSx SINE Alu -1 311 1 1780 177 23 0 chr17 50444076 50444381 -39060172 - AluJb SINE Alu 0 312 1 641 258 158 97 chr17 50444381 50444677 -39059876 - HAL1 LINE L1 -421 2086 1809 2099 122 30 0 chr17 50444677 50444973 -39059580 + AluSx SINE Alu 1 305 -7 709 135 24 48 chr17 50444979 50445105 -39059448 + FLAM_C SINE Alu 2 124 -9 641 258 158 97 chr17 50445105 50445156 -39059397 - HAL1 LINE L1 -702 1805 1759 1881 163 3 7 chr17 50445156 50445462 -39059091 - AluSx SINE Alu -7 305 1 641 258 158 97 chr17 50445462 50445771 -39058782 - HAL1 LINE L1 -748 1759 1367 291 225 180 0 chr17 50445828 50445917 -39058636 + L2 LINE L2 3209 3313 0 669 170 0 0 chr17 50445965 50446077 -39058476 - AluJo/FRAM SINE Alu -1 311 200 980 181 0 0 chr17 50446077 50446232 -39058321 - AluJo SINE Alu -73 239 85 2207 112 14 0 chr17 50446235 50446530 -39058023 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 50446601 50446629 -39057924 + AT_rich Low_complexity Low_complexity 1 28 0 2577 55 0 3 chr17 50446678 50446989 -39057564 - AluY SINE Alu -1 310 1 1797 162 0 32 chr17 50446993 50447308 -39057245 - AluJo SINE Alu -7 305 1 2188 121 3 0 chr17 50447423 50447721 -39056832 + AluSx SINE Alu 1 299 -13 324 190 63 51 chr17 50447726 50447805 -39056748 - L1ME LINE L1 -554 5616 5537 7974 71 2 1 chr17 50448200 50449168 -39055385 - LTR5 LTR ERVK 0 969 1 399 264 72 30 chr17 50449287 50449454 -39055099 - MER113 DNA MER1_type? -10 511 338 1767 148 25 18 chr17 50449470 50449754 -39054799 - AluJo SINE Alu -26 286 1 2203 119 0 6 chr17 50449815 50450127 -39054426 - AluSg SINE Alu 0 310 1 359 228 82 25 chr17 50450171 50450329 -39054224 - MER113 DNA MER1_type? -344 177 11 868 175 48 0 chr17 50452743 50452892 -39051661 - AluJb SINE Alu -19 293 134 2007 127 45 0 chr17 50452892 50453184 -39051369 - AluSx SINE Alu -7 305 1 868 175 48 0 chr17 50453184 50453200 -39051353 - AluJb SINE Alu -178 134 120 530 67 133 0 chr17 50453211 50453286 -39051267 - MER41B LTR ERV1 -385 250 166 1963 153 13 3 chr17 50453286 50453587 -39050966 - AluSx SINE Alu -8 304 1 1277 216 45 11 chr17 50453771 50454058 -39050495 - AluJb SINE Alu -15 297 1 21 0 0 0 chr17 50454083 50454104 -39050449 + AT_rich Low_complexity Low_complexity 1 21 0 934 110 0 0 chr17 50454108 50454226 -39050327 - AluSq/x SINE Alu -194 118 1 1605 186 4 0 chr17 50454430 50454725 -39049828 + AluJb SINE Alu 7 302 0 1616 173 18 7 chr17 50454725 50455002 -39049551 - AluJb SINE Alu -21 291 12 1983 121 43 0 chr17 50455052 50455333 -39049220 - AluSx SINE Alu -19 293 1 1130 182 6 127 chr17 50456234 50456574 -39047979 + AluSp SINE Alu 10 308 -5 2232 132 0 0 chr17 50456636 50456947 -39047606 + AluSx SINE Alu 1 311 -1 1481 158 51 59 chr17 50457423 50457532 -39047021 + Tigger3(Golem) DNA MER2_type 1 109 -2919 2408 107 0 3 chr17 50457532 50457841 -39046712 - AluSx SINE Alu -4 308 1 1481 158 51 59 chr17 50457841 50458115 -39046438 + Tigger3(Golem) DNA MER2_type 109 3028 0 26 30 0 0 chr17 50458301 50458334 -39046219 + AT_rich Low_complexity Low_complexity 1 33 0 2123 113 7 0 chr17 50458467 50458771 -39045782 - AluSq SINE Alu 0 306 1 246 62 0 0 chr17 50459456 50459488 -39045065 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 753 237 66 0 chr17 50462664 50462875 -39041678 + MIR SINE MIR 13 237 -25 2579 62 0 10 chr17 50463026 50463332 -39041221 + AluY SINE Alu 1 303 -8 209 291 47 39 chr17 50463598 50463725 -39040828 - L2 LINE L2 -472 2842 2715 1887 177 3 0 chr17 50464688 50464999 -39039554 - AluJb SINE Alu 0 312 1 1017 321 99 12 chr17 50465184 50465782 -39038771 - L1MC4a LINE L1 -1875 5933 5284 1410 115 31 0 chr17 50465934 50466126 -39038427 + AluSq SINE Alu 2 199 -114 2211 121 0 0 chr17 50466126 50466423 -39038130 - AluSq SINE Alu -16 297 1 278 218 165 77 chr17 50466433 50466603 -39037950 + L1ME3 LINE L1 5931 6115 -47 669 176 17 0 chr17 50466603 50466722 -39037831 + FLAM_C SINE Alu 1 121 -12 233 275 0 50 chr17 50467318 50467398 -39037155 + MIR3 SINE MIR 130 205 -3 814 261 16 5 chr17 50467580 50467768 -39036785 + MER58C DNA MER1_type 15 204 -11 22 35 0 0 chr17 50467898 50467927 -39036626 + AT_rich Low_complexity Low_complexity 1 29 0 531 250 23 0 chr17 50468932 50469060 -39035493 - MER5A DNA MER1_type -22 167 37 225 0 0 0 chr17 50469434 50469459 -39035094 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2071 97 4 4 chr17 50469459 50469738 -39034815 - AluY SINE Alu -32 279 1 1014 222 33 0 chr17 50470349 50470561 -39033992 + MER20 DNA MER1_type 1 219 0 197 263 0 35 chr17 50471003 50471060 -39033493 - MIR SINE MIR -58 150 96 1061 111 7 13 chr17 50471156 50471309 -39033244 + AluSx SINE Alu 2 153 -159 1300 100 6 0 chr17 50471435 50471605 -39032948 + AluSq SINE Alu 11 181 -132 389 192 65 62 chr17 50471731 50471876 -39032677 + MER69 DNA AcHobo 25 2526 0 594 216 10 31 chr17 50472015 50472166 -39032387 - LTR39 LTR ERV1 0 783 475 279 269 0 0 chr17 50473029 50473096 -39031457 + MIR SINE MIR 186 252 -10 535 267 0 15 chr17 50473107 50473242 -39031311 - MIR SINE MIR -67 195 63 253 295 9 29 chr17 50473571 50473676 -39030877 - MIR SINE MIR -90 118 16 2142 129 3 16 chr17 50473742 50474052 -39030501 + AluSx SINE Alu 1 306 -6 804 135 0 16 chr17 50474829 50474955 -39029598 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr17 50474975 50474996 -39029557 + AT_rich Low_complexity Low_complexity 1 21 0 755 169 0 0 chr17 50475377 50475495 -39029058 - FLAM_C SINE Alu -15 118 1 4208 185 39 22 chr17 50475935 50476990 -39027563 - L1MB7 LINE L1 -19 6663 5594 381 151 0 0 chr17 50477111 50477164 -39027389 - Alu SINE Alu -248 53 1 1565 233 29 43 chr17 50477271 50477786 -39026767 - L1MB7 LINE L1 -2380 4264 3757 1791 178 0 7 chr17 50477790 50478094 -39026459 + AluJo SINE Alu 7 308 -4 993 192 6 0 chr17 50478101 50478273 -39026280 + AluJo SINE Alu 1 173 -139 434 266 46 23 chr17 50478273 50478446 -39026107 - L1MB7 LINE L1 -4217 2429 2253 2241 129 0 0 chr17 50478456 50478767 -39025786 - AluSx SINE Alu -1 311 1 3109 193 39 64 chr17 50478767 50478987 -39025566 - L1MB7 LINE L1 -4621 2025 1801 1315 174 9 109 chr17 50478987 50479163 -39025390 - AluJb SINE Alu -22 290 159 6651 63 18 9 chr17 50479163 50480015 -39024538 - SVA Other Other -3 1383 525 1315 174 9 109 chr17 50480015 50480159 -39024394 - AluJb SINE Alu -153 159 2 3109 193 39 64 chr17 50480159 50480816 -39023737 - L1MB7 LINE L1 -4845 1801 1170 645 192 15 15 chr17 50480816 50480946 -39023607 + FLAM_C SINE Alu 2 131 -12 4841 185 41 79 chr17 50480946 50482127 -39022426 - L1MB7 LINE L1 -5369 1173 38 2332 82 3 0 chr17 50482127 50482432 -39022121 - AluY SINE Alu -5 306 1 4841 185 41 79 chr17 50482432 50482468 -39022085 - L1MB7 LINE L1 -6504 38 2 1932 143 0 13 chr17 50482503 50482811 -39021742 + 7SLRNA srpRNA srpRNA 13 316 -4 875 163 0 0 chr17 50482898 50483039 -39021514 - AluSg/x SINE Alu -39 271 131 1647 154 33 4 chr17 50483125 50483398 -39021155 + AluSx SINE Alu 1 281 -31 228 86 0 0 chr17 50483398 50483433 -39021120 + (GGGGA)n Simple_repeat Simple_repeat 2 36 0 * 254 139 56 14 chr17 50483432 50483504 -39021049 + GA-rich Low_complexity Low_complexity 2 76 0 686 190 16 0 chr17 50483588 50483709 -39020844 + MIR SINE MIR 50 172 -90 24 0 0 0 chr17 50483753 50483777 -39020776 + AT_rich Low_complexity Low_complexity 1 24 0 298 309 15 0 chr17 50483961 50484029 -39020524 - L2 LINE L2 0 3272 3204 1260 96 0 0 chr17 50484033 50484200 -39020353 + AluSg/x SINE Alu 140 306 -6 194 310 86 0 chr17 50484204 50484262 -39020291 - L2 LINE L2 -93 3179 3117 2218 93 0 16 chr17 50484446 50484756 -39019797 + AluSq SINE Alu 1 305 -8 1856 171 8 58 chr17 50485923 50486218 -39018335 - L1ME1 LINE L1 -5 6161 5853 2110 124 0 0 chr17 50486218 50486517 -39018036 - AluSx SINE Alu -13 299 1 1856 171 8 58 chr17 50486517 50486577 -39017976 - L1ME1 LINE L1 -313 5853 5825 884 217 193 27 chr17 50486577 50486872 -39017681 - MER2 DNA MER2_type 0 344 1 1856 171 8 58 chr17 50486872 50486912 -39017641 - L1ME1 LINE L1 -341 5825 5785 1232 163 0 0 chr17 50486912 50487114 -39017439 + AluSg/x SINE Alu 104 305 -7 746 193 61 56 chr17 50487114 50487327 -39017226 - L1ME1 LINE L1 -964 5182 4969 855 144 8 0 chr17 50487337 50487469 -39017084 - FLAM_C SINE Alu 0 133 1 195 69 0 0 chr17 50487480 50487509 -39017044 + (TA)n Simple_repeat Simple_repeat 1 29 0 993 143 0 0 chr17 50487509 50487663 -39016890 + AluJb SINE Alu 132 285 -27 246 156 0 0 chr17 50487663 50487708 -39016845 + (TA)n Simple_repeat Simple_repeat 2 46 0 1163 243 85 19 chr17 50488340 50488718 -39015835 + L1MC4 LINE L1 7597 7999 -43 1796 147 3 0 chr17 50488813 50489098 -39015455 + AluJb SINE Alu 14 299 -13 650 210 201 9 chr17 50489424 50489643 -39014910 - MIR SINE MIR 0 262 2 1924 199 128 31 chr17 50489808 50490116 -39014437 - L1MC4 LINE L1 -371 7671 7394 1481 170 42 65 chr17 50490116 50490422 -39014131 + AluJo SINE Alu 2 300 -2 1924 199 128 31 chr17 50490422 50490755 -39013798 - L1MC4 LINE L1 -648 7394 6968 207 0 0 0 chr17 50492122 50492145 -39012408 + (T)n Simple_repeat Simple_repeat 1 23 0 202 255 0 0 chr17 50492191 50492242 -39012311 - MIR SINE MIR -110 152 102 1707 162 10 3 chr17 50494999 50495296 -39009257 + AluJb SINE Alu 1 299 -13 219 342 83 35 chr17 50496348 50496576 -39007977 + L2 LINE L2 2826 3064 -208 769 155 0 0 chr17 50496633 50496749 -39007804 + AluJb SINE Alu 172 287 -25 568 270 57 72 chr17 50496760 50497234 -39007319 - L1ME1 LINE L1 -1529 4617 4151 891 178 103 23 chr17 50497245 50497459 -39007094 - AluJo SINE Alu 0 312 82 1006 188 0 19 chr17 50497772 50498006 -39006547 + AluJo SINE Alu 1 268 -44 227 245 0 0 chr17 50498011 50498064 -39006489 + AluJ/monomer SINE Alu 242 294 -8 * 638 173 22 43 chr17 50498060 50498199 -39006354 - MER2 DNA MER2_type -209 136 1 1169 89 6 0 chr17 50498434 50498592 -39005961 - AluSp SINE Alu -10 303 145 259 221 186 12 chr17 50498610 50498696 -39005857 - MIR3 SINE MIR -14 194 94 1701 125 69 0 chr17 50499127 50499416 -39005137 + AluSx SINE Alu 1 309 -3 200 253 126 58 chr17 50499427 50499514 -39005039 - MIR3 SINE MIR -33 175 83 447 206 31 10 chr17 50499782 50499879 -39004674 + MER91A DNA MER1_type 6 104 -92 2332 233 117 12 chr17 50501083 50501684 -39002869 - MER21B LTR ERV1 -181 682 19 2155 110 63 0 chr17 50501696 50502031 -39002522 + L1PA14 LINE L1 5803 6158 -3 503 173 0 0 chr17 50502094 50502169 -39002384 - MER21B LTR ERV1 -777 86 12 266 213 0 16 chr17 50502193 50502254 -39002299 - LTR33A LTR ERVL -21 502 443 182 286 16 32 chr17 50502954 50503017 -39001536 - L2 LINE L2 -2892 422 361 2209 115 0 0 chr17 50503024 50503337 -39001216 - AluSq SINE Alu 0 313 1 1838 127 26 13 chr17 50503355 50503663 -39000890 - AluSx SINE Alu 0 312 1 833 137 8 0 chr17 50503730 50503861 -39000692 - FLAM_C SINE Alu 0 133 2 226 292 67 0 chr17 50504326 50504415 -39000138 + MLT1J LTR MaLR 377 471 -40 347 310 8 8 chr17 50504706 50504835 -38999718 - MLT1H LTR MaLR -326 223 95 1620 180 7 16 chr17 50505454 50505760 -38998793 - AluJb SINE Alu -9 303 1 315 228 89 49 chr17 50506222 50506345 -38998208 + L1MC4a LINE L1 5788 5915 -1893 344 164 0 0 chr17 50506372 50506427 -38998126 - MER3 DNA MER1_type 0 209 155 1388 172 10 67 chr17 50506429 50506552 -38998001 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr17 50506552 50506572 -38997981 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2026 115 7 0 chr17 50506575 50506861 -38997692 - AluSx SINE Alu -22 290 3 1388 172 10 67 chr17 50506861 50507047 -38997506 + AluJo SINE Alu 131 296 -16 325 172 115 46 chr17 50507048 50507135 -38997418 + FRAM SINE Alu 72 164 -2 * 529 228 59 0 chr17 50507121 50507257 -38997296 - MER3 DNA MER1_type -59 150 7 777 159 0 8 chr17 50507643 50507769 -38996784 + AluJb SINE Alu 89 213 -99 705 200 15 7 chr17 50507916 50508051 -38996502 - AluJo SINE Alu -176 136 1 201 39 0 0 chr17 50508067 50508093 -38996460 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1037 178 89 63 chr17 50508096 50508365 -38996188 - AluJb SINE Alu -32 280 5 180 0 0 0 chr17 50508508 50508528 -38996025 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 1980 144 0 0 chr17 50508554 50508853 -38995700 - AluJb SINE Alu -13 299 1 299 243 65 0 chr17 50508928 50509035 -38995518 + HAL1 LINE L1 1696 1809 -698 2188 108 3 0 chr17 50509227 50509533 -38995020 - AluSx SINE Alu -5 307 1 304 219 0 0 chr17 50509533 50509597 -38994956 + HAL1 LINE L1 2090 2153 -354 2128 116 0 19 chr17 50509835 50510153 -38994400 - AluSx SINE Alu 0 312 1 329 229 46 51 chr17 50510156 50510331 -38994222 + L1MC5 LINE L1 7591 7764 -197 323 222 0 25 chr17 50510344 50510425 -38994128 + L1MC5 LINE L1 7835 7913 -48 2367 67 3 9 chr17 50510798 50511139 -38993414 + AluSp SINE Alu 1 313 0 341 195 85 0 chr17 50511142 50511224 -38993329 - MER2 DNA MER2_type -135 210 122 2078 120 0 0 chr17 50511224 50511516 -38993037 + AluSx SINE Alu 1 292 -20 239 299 141 47 chr17 50511922 50512327 -38992226 + L2 LINE L2 1293 1735 -1579 1293 188 0 8 chr17 50512363 50512602 -38991951 - AluJo SINE Alu -15 297 61 827 305 158 27 chr17 50512651 50513422 -38991131 + L2 LINE L2 1865 2736 -578 30 0 0 0 chr17 50513475 50513505 -38991048 + AT_rich Low_complexity Low_complexity 1 30 0 1505 168 49 11 chr17 50513514 50513800 -38990753 + AluSx SINE Alu 1 297 -15 952 155 45 0 chr17 50513921 50514076 -38990477 - AluSx SINE Alu -149 163 2 670 183 11 89 chr17 50514130 50514179 -38990374 - MER3 DNA MER1_type 4 166 115 2039 125 0 0 chr17 50514179 50514474 -38990079 + AluSx SINE Alu 1 295 -17 670 183 11 89 chr17 50514474 50514604 -38989949 - MER3 DNA MER1_type -47 115 1 1986 110 34 3 chr17 50514744 50515036 -38989517 + AluSx SINE Alu 1 301 -11 1801 124 53 0 chr17 50515618 50515900 -38988653 + AluJb SINE Alu 1 297 -15 1945 123 7 3 chr17 50516554 50516839 -38987714 + AluSx SINE Alu 1 286 -26 180 0 0 0 chr17 50516839 50516859 -38987694 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1442 162 0 0 chr17 50517051 50517285 -38987268 - AluJb SINE Alu -78 234 1 586 211 81 53 chr17 50517339 50517460 -38987093 - L1ME3A LINE L1 -5 6165 6034 2079 125 0 3 chr17 50517460 50517764 -38986789 + AluSx SINE Alu 1 303 -9 586 211 81 53 chr17 50517764 50517851 -38986702 - L1ME3A LINE L1 -136 6034 5951 430 164 0 0 chr17 50518056 50518123 -38986430 + AluJ/FLAM SINE Alu 3 69 -243 511 108 0 54 chr17 50518152 50518245 -38986308 + FLAM_C SINE Alu 54 141 -2 189 308 0 0 chr17 50520125 50520177 -38984376 - L2 LINE L2 -11 3302 3251 1588 94 112 22 chr17 50520183 50520460 -38984093 + AluJb SINE Alu 1 302 -10 207 0 0 0 chr17 50520485 50520508 -38984045 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1950 113 3 20 chr17 50520566 50520878 -38983675 + AluSx SINE Alu 1 312 0 539 127 0 0 chr17 50521295 50521374 -38983179 + AluSp/q SINE Alu 179 257 -56 696 75 0 21 chr17 50521379 50521473 -38983080 - AluS SINE Alu -220 93 2 1918 115 21 0 chr17 50522008 50522310 -38982243 + AluSx SINE Alu 1 308 0 459 0 0 0 chr17 50522310 50522361 -38982192 + (CAT)n Simple_repeat Simple_repeat 2 52 0 319 145 43 58 chr17 50522433 50522502 -38982051 - L2 LINE L2 -4 3268 3201 448 191 138 86 chr17 50523139 50523291 -38981262 + MER69 DNA AcHobo 18 2526 0 499 184 10 29 chr17 50523437 50523540 -38981013 - LTR39 LTR ERV1 -7 776 676 743 167 109 0 chr17 50523643 50523799 -38980754 - L1ME3A LINE L1 -414 5752 5580 350 133 229 24 chr17 50524195 50524278 -38980275 + Charlie5 DNA MER1_type 17 116 -2496 417 50 0 50 chr17 50524741 50524801 -38979752 + AluSg/x SINE Alu 158 214 -98 1568 115 17 4 chr17 50525136 50525371 -38979182 - AluSx SINE Alu -74 238 1 397 358 89 50 chr17 50525893 50526175 -38978378 - L2 LINE L2 -9 3263 2971 2486 184 55 14 chr17 50526321 50526976 -38977577 - L1M4c LINE L1 -4829 1817 1163 693 169 15 15 chr17 50526976 50527106 -38977447 + FLAM_C SINE Alu 2 131 -12 4900 189 43 64 chr17 50527106 50528266 -38976287 - L1M4c LINE L1 -5369 1173 37 2304 72 3 7 chr17 50528266 50528571 -38975982 - AluY SINE Alu -7 304 1 4900 189 43 64 chr17 50528571 50528607 -38975946 - L1M4c LINE L1 -6505 37 2 1813 156 0 13 chr17 50528642 50528944 -38975609 + 7SLRNA srpRNA srpRNA 13 310 -10 923 149 0 0 chr17 50529031 50529172 -38975381 - AluSg/x SINE Alu -39 273 133 1592 169 35 3 chr17 50529258 50529548 -38975005 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr17 50529926 50529948 -38974605 + AT_rich Low_complexity Low_complexity 1 22 0 298 309 15 0 chr17 50530132 50530200 -38974353 - L2 LINE L2 0 3272 3204 1212 82 0 0 chr17 50530204 50530362 -38974191 + AluSg/x SINE Alu 140 297 -15 194 310 86 0 chr17 50530366 50530424 -38974129 - L2 LINE L2 -93 3179 3117 2108 103 0 17 chr17 50530612 50530913 -38973640 + AluSq SINE Alu 7 302 -11 1136 247 85 19 chr17 50531120 50531496 -38973057 + L1MC4 LINE L1 7599 7999 -43 1783 147 3 0 chr17 50531591 50531876 -38972677 + AluJb SINE Alu 14 299 -13 623 215 201 9 chr17 50532202 50532421 -38972132 - MIR SINE MIR 0 262 2 1019 214 162 7 chr17 50532586 50532894 -38971659 - L1MC4 LINE L1 -371 7671 7316 1383 173 0 63 chr17 50532894 50533178 -38971375 + AluJb SINE Alu 2 267 -45 913 211 107 33 chr17 50533188 50533525 -38971028 - L1MC4 LINE L1 -713 7329 6968 188 274 0 0 chr17 50534959 50535010 -38969543 - MIR SINE MIR -110 152 102 1766 158 10 3 chr17 50537754 50538051 -38966502 + AluJb SINE Alu 1 299 -13 180 97 0 0 chr17 50538111 50538142 -38966411 + (T)n Simple_repeat Simple_repeat 1 31 0 231 338 84 36 chr17 50539125 50539350 -38965203 + L2 LINE L2 2826 3061 -211 789 147 0 0 chr17 50539410 50539526 -38965027 + AluJb SINE Alu 172 287 -25 1647 135 69 0 chr17 50540005 50540293 -38964260 + AluSx SINE Alu 1 308 -4 208 275 25 16 chr17 50540311 50540387 -38964166 - MIR SINE MIR -64 144 82 441 216 31 10 chr17 50540655 50540752 -38963801 + MER91A DNA MER1_type 6 104 -92 296 313 70 82 chr17 50542600 50542709 -38961844 - MIR SINE MIR -8 254 145 1904 89 0 4 chr17 50542709 50542968 -38961585 + AluY SINE Alu 36 293 -18 296 313 70 82 chr17 50542968 50543114 -38961439 - MIR SINE MIR -117 145 2 227 186 0 47 chr17 50543213 50543256 -38961297 - AluJb SINE Alu -134 165 125 4627 125 192 91 chr17 50543275 50544703 -38959850 - pTR5 LTR ERV1 0 2438 736 1722 234 61 11 chr17 50545482 50546077 -38958476 - MER21B LTR ERV1 -186 677 22 2141 113 67 0 chr17 50546092 50546420 -38958133 + L1PA14 LINE L1 5803 6152 -9 505 190 0 0 chr17 50546497 50546576 -38957977 - MER21B LTR ERV1 -773 90 12 315 200 0 0 chr17 50546600 50546660 -38957893 - LTR33A LTR ERVL -21 502 443 227 364 0 0 chr17 50547352 50547429 -38957124 - L2 LINE L2 -2885 429 353 2065 115 0 26 chr17 50547437 50547749 -38956804 - AluSq SINE Alu -9 304 1 1471 116 131 19 chr17 50547752 50548019 -38956534 - AluSx SINE Alu -6 306 10 717 132 83 0 chr17 50548181 50548302 -38956251 - AluJb SINE Alu -179 133 3 288 244 89 49 chr17 50548518 50548641 -38955912 + L1MC4a LINE L1 5788 5915 -1893 318 182 0 0 chr17 50548668 50548723 -38955830 - MER3 DNA MER1_type 0 209 155 786 150 0 0 chr17 50548729 50548849 -38955704 + AluJo/FLAM SINE Alu 5 124 -188 1966 130 10 0 chr17 50548849 50549150 -38955403 - AluSx SINE Alu 0 312 9 3746 205 76 56 chr17 50549251 50549912 -38954641 + L1M4 LINE L1 3787 4433 -1713 2004 129 7 0 chr17 50549912 50550207 -38954346 + AluSx SINE Alu 1 297 -15 3746 205 76 56 chr17 50550207 50550305 -38954248 + L1M4 LINE L1 4433 4528 -1618 1728 179 13 16 chr17 50550305 50550613 -38953940 + AluJo SINE Alu 1 307 -5 3746 205 76 56 chr17 50550613 50550950 -38953603 + L1M4 LINE L1 4528 4906 -1240 803 144 0 0 chr17 50550950 50551075 -38953478 + FLAM_C SINE Alu 1 125 -18 2039 154 47 90 chr17 50551076 50551507 -38953046 + L1M4 LINE L1 4890 5295 -851 1098 166 90 90 chr17 50551507 50551736 -38952817 + AluJo SINE Alu 1 232 -70 2263 101 0 0 chr17 50551736 50552043 -38952510 + AluSg1 SINE Alu 1 307 -2 1098 166 90 90 chr17 50552043 50552103 -38952450 + AluJo SINE Alu 231 290 -12 2039 154 47 90 chr17 50552103 50552205 -38952348 + L1M4 LINE L1 5295 5400 -746 1664 182 7 10 chr17 50552209 50552339 -38952214 + AluJb SINE Alu 5 134 -178 1743 126 44 0 chr17 50552339 50552634 -38951919 + AluSx SINE Alu 1 307 0 1664 182 7 10 chr17 50552634 50552809 -38951744 + AluJb SINE Alu 134 310 -2 465 91 0 34 chr17 50552809 50552897 -38951656 + (GGGA)n Simple_repeat Simple_repeat 1 85 0 1474 158 33 36 chr17 50552904 50553207 -38951346 + L1M4 LINE L1 5400 5701 -473 830 165 0 0 chr17 50553208 50553341 -38951212 + FLAM_C SINE Alu 1 133 0 1858 166 0 3 chr17 50553352 50553660 -38950893 + AluJb SINE Alu 1 307 -5 1654 155 7 29 chr17 50553747 50554056 -38950497 - AluJo SINE Alu -10 302 1 1933 130 7 0 chr17 50554225 50554518 -38950035 + AluSx SINE Alu 1 295 -17 1753 121 26 59 chr17 50554538 50554844 -38949709 + AluSq SINE Alu 1 296 -17 2115 110 7 0 chr17 50555143 50555444 -38949109 - AluSx SINE Alu -9 303 1 199 178 44 44 chr17 50555591 50555636 -38948917 + L2 LINE L2 3268 3312 -1 2324 54 0 20 chr17 50555894 50556192 -38948361 - AluY SINE Alu -19 292 1 2248 80 0 16 chr17 50556456 50556768 -38947785 + AluSx SINE Alu 1 307 -5 1816 134 13 29 chr17 50556935 50557249 -38947304 + AluJb SINE Alu 1 309 -3 261 220 68 0 chr17 50557253 50557312 -38947241 + MLT1A2 LTR MaLR 34 96 -294 36 0 0 0 chr17 50557385 50557421 -38947132 + GC_rich Low_complexity Low_complexity 1 36 0 209 174 43 0 chr17 50557879 50557925 -38946628 + (TCTCTG)n Simple_repeat Simple_repeat 1 48 0 279 0 0 0 chr17 50558176 50558207 -38946346 + (CA)n Simple_repeat Simple_repeat 2 32 0 334 203 0 14 chr17 50558212 50558286 -38946267 - L1M4 LINE L1 -2116 4030 3958 2146 128 0 0 chr17 50558337 50558650 -38945903 + AluSq SINE Alu 1 313 0 1954 130 0 23 chr17 50558665 50558804 -38945749 + AluSx SINE Alu 1 142 -170 1752 157 10 0 chr17 50558804 50559103 -38945450 + AluSx SINE Alu 3 304 -8 1954 130 0 23 chr17 50559103 50559271 -38945282 + AluSx SINE Alu 142 301 -11 1038 236 48 41 chr17 50559271 50559433 -38945120 + MLT1A2 LTR MaLR 80 239 -135 2763 161 2 58 chr17 50559433 50559606 -38944947 + MER66B LTR ERV1 1 182 -304 1987 138 0 6 chr17 50559606 50559917 -38944636 - AluSg SINE Alu -1 309 1 2763 161 2 58 chr17 50559917 50560153 -38944400 + MER66B LTR ERV1 182 378 -108 1614 166 38 7 chr17 50560153 50560443 -38944110 + AluSx SINE Alu 1 299 -13 2763 161 2 58 chr17 50560443 50560547 -38944006 + MER66B LTR ERV1 378 486 0 1038 236 48 41 chr17 50560547 50560677 -38943876 + MLT1A2 LTR MaLR 239 374 0 231 200 15 46 chr17 50560681 50560746 -38943807 + Charlie8 DNA MER1_type 1355 1417 -1000 2053 103 0 32 chr17 50560822 50561132 -38943421 + AluSx SINE Alu 6 305 -7 601 198 8 16 chr17 50561139 50561260 -38943293 + FLAM_C SINE Alu 7 126 -17 209 415 14 5 chr17 50561524 50561731 -38942822 - L2 LINE L2 -2654 660 452 2398 73 0 0 chr17 50561883 50562185 -38942368 - AluY SINE Alu -9 302 1 2140 78 0 4 chr17 50562193 50562525 -38942028 - AluY SINE Alu 0 331 1 740 238 35 20 chr17 50562526 50562728 -38941825 - MER46C DNA MER2_type -126 212 8 307 253 11 11 chr17 50562788 50562875 -38941678 + MER5A DNA MER1_type 79 165 -24 587 187 86 20 chr17 50563604 50563846 -38940707 - MLT1D LTR MaLR -75 430 133 3874 61 2 4 chr17 50563866 50564343 -38940210 - LTR17 LTR ERV1 -49 731 256 889 135 0 0 chr17 50564344 50564477 -38940076 - AluSq/x SINE Alu -179 133 1 249 196 0 0 chr17 50564577 50564633 -38939920 + (TA)n Simple_repeat Simple_repeat 1 56 0 248 171 0 0 chr17 50564634 50564669 -38939884 - Alu SINE Alu -267 35 1 2503 202 94 65 chr17 50564703 50564911 -38939642 - L1MC4 LINE L1 -2 8040 7840 2309 100 0 0 chr17 50564911 50565220 -38939333 - AluSg SINE Alu -1 309 1 2503 202 94 65 chr17 50565220 50565739 -38938814 - L1MC4 LINE L1 -202 7840 7282 2286 77 3 3 chr17 50565739 50566037 -38938516 - AluSp SINE Alu -15 298 1 2503 202 94 65 chr17 50566037 50566159 -38938394 - L1MC4 LINE L1 -760 7282 7165 630 165 0 0 chr17 50566164 50566267 -38938286 - AluSg/x SINE Alu -11 298 196 1839 130 16 25 chr17 50566403 50566718 -38937835 + AluSx SINE Alu 1 312 0 703 268 24 14 chr17 50566787 50566996 -38937557 - L1MC/D LINE L1 -2000 5808 5598 1580 196 20 3 chr17 50567015 50567321 -38937232 - AluSx SINE Alu -1 311 1 1732 39 201 27 chr17 50567525 50567784 -38936769 - AluY SINE Alu -7 304 1 2162 110 13 0 chr17 50568396 50568704 -38935849 - AluSx SINE Alu 0 312 1 2037 111 3 7 chr17 50568791 50569088 -38935465 + AluSx SINE Alu 1 296 -16 1135 153 0 0 chr17 50569110 50569287 -38935266 + AluSg/x SINE Alu 120 296 -14 1413 151 73 31 chr17 50569392 50569503 -38935050 + AluJb SINE Alu 1 106 -206 2289 97 0 0 chr17 50569503 50569813 -38934740 + AluSg SINE Alu 1 310 0 1413 151 73 31 chr17 50569813 50569960 -38934593 + AluJb SINE Alu 106 270 -42 1646 160 6 45 chr17 50570239 50570551 -38934002 + AluJo SINE Alu 1 300 -12 1439 99 5 0 chr17 50570742 50570943 -38933610 - AluSg1 SINE Alu -77 232 31 1037 186 4 70 chr17 50570942 50571200 -38933353 - AluSq SINE Alu -43 270 30 * 1252 210 176 41 chr17 50571342 50571756 -38932797 + MER31A LTR ERV1 1 470 -15 1907 97 24 88 chr17 50571758 50572098 -38932455 - AluYb8 SINE Alu 0 318 1 1629 183 3 10 chr17 50572107 50572408 -38932145 - AluJb SINE Alu -13 299 1 2364 84 0 3 chr17 50572437 50572747 -38931806 - AluSc SINE Alu 0 309 1 657 183 51 15 chr17 50572749 50572886 -38931667 - FLAM_C SINE Alu 0 143 2 1616 156 4 4 chr17 50572927 50573197 -38931356 + AluJb SINE Alu 43 312 0 2170 74 24 7 chr17 50573472 50573770 -38930783 + AluY SINE Alu 1 303 -8 2341 82 7 0 chr17 50573780 50574086 -38930467 + AluSp SINE Alu 1 308 -5 1529 165 17 21 chr17 50574094 50574385 -38930168 + AluJo SINE Alu 1 290 -22 190 226 226 0 chr17 50574512 50574574 -38929979 + MIR SINE MIR 113 188 -74 22 0 0 0 chr17 50575207 50575229 -38929324 + AT_rich Low_complexity Low_complexity 1 22 0 565 76 13 0 chr17 50575953 50576032 -38928521 - MADE1 DNA Mariner 0 80 1 22 56 0 0 chr17 50576550 50576586 -38927967 + AT_rich Low_complexity Low_complexity 1 36 0 204 97 0 0 chr17 50578874 50578905 -38925648 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 1384 180 38 19 chr17 50578909 50579176 -38925377 - AluJo SINE Alu -39 273 2 2100 108 7 0 chr17 50579186 50579482 -38925071 - AluSq SINE Alu -15 298 1 187 284 0 54 chr17 50579639 50579713 -38924840 - MIR SINE MIR -81 127 58 1945 125 24 0 chr17 50580123 50580411 -38924142 - AluSx SINE Alu -17 295 1 22 0 0 0 chr17 50580421 50580443 -38924110 + AT_rich Low_complexity Low_complexity 1 22 0 2024 136 0 3 chr17 50580847 50581156 -38923397 - AluSx SINE Alu -4 308 1 288 0 0 0 chr17 50581623 50581655 -38922898 + (CA)n Simple_repeat Simple_repeat 2 33 0 270 0 0 0 chr17 50581701 50581731 -38922822 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 2187 99 0 0 chr17 50581734 50582028 -38922525 - AluSx SINE Alu -18 294 1 1572 161 58 32 chr17 50582036 50582347 -38922206 - Charlie1b DNA MER1_type -198 325 7 2028 111 13 20 chr17 50582366 50582664 -38921889 - AluSx SINE Alu -16 296 1 2204 129 3 0 chr17 50582680 50582990 -38921563 - AluSx SINE Alu -1 311 1 2114 102 39 0 chr17 50583002 50583286 -38921267 - AluSg SINE Alu -15 295 1 284 104 42 0 chr17 50583664 50583712 -38920841 - MER4E LTR ERV1 -62 717 668 236 204 0 37 chr17 50583819 50583873 -38920680 + MER57A LTR ERV1 285 336 -67 2075 131 0 0 chr17 50584247 50584538 -38920015 - AluSx SINE Alu -21 291 1 672 178 155 0 chr17 50584569 50584698 -38919855 + AluJo SINE Alu 125 273 -39 2220 100 7 0 chr17 50584855 50585145 -38919408 - AluSq SINE Alu -21 292 1 1699 160 4 14 chr17 50585148 50585429 -38919124 - AluJb SINE Alu -13 299 22 2134 129 7 0 chr17 50585473 50585775 -38918778 - AluSx SINE Alu -8 304 1 309 400 14 43 chr17 50586034 50586174 -38918379 + L2 LINE L2 3116 3251 -21 2277 80 6 19 chr17 50586201 50586515 -38918038 - AluSx SINE Alu -2 310 1 265 281 31 0 chr17 50587164 50587228 -38917325 - MIR3 SINE MIR -49 159 94 2345 85 3 0 chr17 50587524 50587830 -38916723 + AluY SINE Alu 1 307 -4 23 54 0 0 chr17 50587912 50587949 -38916604 + AT_rich Low_complexity Low_complexity 1 37 0 2416 74 0 7 chr17 50588037 50588336 -38916217 + AluSq SINE Alu 1 297 -16 1817 165 0 13 chr17 50589112 50589415 -38915138 - AluJo SINE Alu -13 299 1 209 296 92 0 chr17 50589421 50589519 -38915034 - MIR SINE MIR -67 195 89 23 33 0 0 chr17 50589989 50590019 -38914534 + AT_rich Low_complexity Low_complexity 1 30 0 952 187 0 0 chr17 50590019 50590174 -38914379 - FRAM SINE Alu -11 155 1 1364 137 0 20 chr17 50590186 50590431 -38914122 - AluJb SINE Alu 0 328 88 641 219 6 0 chr17 50590433 50590593 -38913960 + (TA)n Simple_repeat Simple_repeat 2 162 0 2246 87 7 3 chr17 50590593 50590882 -38913671 - AluSp SINE Alu -23 290 1 2360 69 7 20 chr17 50590883 50591188 -38913365 - AluSp SINE Alu -12 301 1 2068 127 7 13 chr17 50591196 50591495 -38913058 - AluSx SINE Alu -15 297 1 846 161 15 0 chr17 50591510 50591640 -38912913 - AluJo SINE Alu -178 134 3 198 0 0 0 chr17 50591682 50591704 -38912849 + (CAAAT)n Simple_repeat Simple_repeat 3 24 0 1662 163 0 75 chr17 50591751 50591920 -38912633 - AluJo SINE Alu -14 298 118 273 29 0 0 chr17 50591920 50591954 -38912599 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2012 98 61 0 chr17 50591954 50592218 -38912335 - AluSc SINE Alu -29 280 1 1662 163 0 75 chr17 50592218 50592366 -38912187 - AluJo SINE Alu -192 120 4 590 286 145 22 chr17 50592380 50592607 -38911946 - MIR SINE MIR -2 260 6 21 0 0 0 chr17 50592620 50592641 -38911912 + AT_rich Low_complexity Low_complexity 1 21 0 387 0 0 0 chr17 50592852 50592895 -38911658 + (ATG)n Simple_repeat Simple_repeat 1 43 0 2343 90 7 7 chr17 50593305 50593615 -38910938 + AluY SINE Alu 1 310 -1 554 194 13 2 chr17 50594931 50595097 -38909456 - MER82 DNA MER2_type -3 650 444 326 299 103 35 chr17 50595129 50595241 -38909312 + MIR SINE MIR 3 133 -129 1804 175 3 3 chr17 50595241 50595544 -38909009 - AluJb SINE Alu -8 304 2 326 299 103 35 chr17 50595544 50595605 -38908948 + MIR SINE MIR 133 188 -74 278 290 86 0 chr17 50595635 50595728 -38908825 - MER82 DNA MER2_type -552 101 1 33 0 0 0 chr17 50595853 50595886 -38908667 + AT_rich Low_complexity Low_complexity 1 33 0 2524 60 0 3 chr17 50596711 50597011 -38907542 - AluY SINE Alu -12 299 1 1464 156 0 4 chr17 50597633 50597858 -38906695 - AluJb SINE Alu -88 224 1 512 284 128 28 chr17 50598356 50598606 -38905947 + L2 LINE L2 3038 3312 -1 1698 97 13 21 chr17 50600183 50600420 -38904133 - AluSp SINE Alu -78 235 1 1583 193 32 3 chr17 50600420 50600705 -38903848 - AluJo SINE Alu -16 296 4 960 250 62 44 chr17 50600752 50601092 -38903461 - L1MD2 LINE L1 -87 6272 5927 36 23 0 0 chr17 50601114 50601157 -38903396 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr17 50601501 50601532 -38903021 + AT_rich Low_complexity Low_complexity 1 31 0 701 114 19 0 chr17 50601604 50601709 -38902844 + MLT2A2 LTR ERVL 298 404 -49 198 0 0 0 chr17 50602316 50602338 -38902215 + (CA)n Simple_repeat Simple_repeat 1 22 0 372 241 43 9 chr17 50602516 50602632 -38901921 + L1MEc LINE L1 35 154 -6242 686 292 5 10 chr17 50602645 50602854 -38901699 + L1MEc LINE L1 230 437 -5959 955 257 96 106 chr17 50602868 50603065 -38901488 + MER21B LTR ERV1 1 198 -665 2015 111 24 3 chr17 50603065 50603354 -38901199 + AluSq SINE Alu 1 295 -18 955 257 96 106 chr17 50603354 50603876 -38900677 + MER21B LTR ERV1 198 713 -150 3321 256 64 48 chr17 50603887 50604227 -38900326 + L1MEc LINE L1 447 780 -5616 1686 177 13 13 chr17 50604227 50604526 -38900027 + AluJo SINE Alu 1 299 -13 3321 256 64 48 chr17 50604526 50604563 -38899990 + L1MEc LINE L1 780 815 -5581 2458 25 3 0 chr17 50604563 50604886 -38899667 + AluY SINE Alu 1 324 0 3321 256 64 48 chr17 50604886 50605035 -38899518 + L1MEc LINE L1 815 960 -5436 1559 143 15 94 chr17 50605035 50605363 -38899190 + AluJo SINE Alu 1 302 -10 2353 84 7 7 chr17 50605363 50605671 -38898882 + AluSg SINE Alu 1 308 -2 3321 256 64 48 chr17 50605671 50606242 -38898311 + L1MEc LINE L1 960 1520 -4876 2200 133 7 0 chr17 50606242 50606551 -38898002 + AluSx SINE Alu 1 311 -1 3321 256 64 48 chr17 50606551 50606673 -38897880 + L1MEc LINE L1 1520 1639 -4757 2401 92 0 7 chr17 50606673 50606979 -38897574 + AluSc SINE Alu 1 304 -5 3321 256 64 48 chr17 50606979 50607117 -38897436 + L1MEc LINE L1 1639 1773 -4623 2246 123 0 0 chr17 50607117 50607425 -38897128 + AluSx SINE Alu 1 308 -4 3321 256 64 48 chr17 50607425 50607699 -38896854 + L1MEc LINE L1 1773 2111 -4285 1588 218 70 7 chr17 50607699 50608130 -38896423 + MLT1C LTR MaLR 10 467 0 2331 96 3 0 chr17 50608195 50608488 -38896065 + AluSp SINE Alu 1 294 -19 1899 162 0 20 chr17 50611253 50611550 -38893003 + AluJb SINE Alu 9 299 -13 23 97 0 0 chr17 50611785 50611857 -38892696 + AT_rich Low_complexity Low_complexity 1 72 0 2039 149 0 0 chr17 50612701 50612990 -38891563 - AluSx SINE Alu -23 289 1 25 31 0 0 chr17 50613076 50613108 -38891445 + AT_rich Low_complexity Low_complexity 1 32 0 1941 140 14 10 chr17 50613116 50613408 -38891145 + AluJo SINE Alu 1 293 -19 2248 82 0 7 chr17 50613591 50613882 -38890671 - AluSc SINE Alu -20 289 1 2295 87 0 0 chr17 50613902 50614191 -38890362 - AluSx SINE Alu -22 290 2 1801 181 3 3 chr17 50616065 50616364 -38888189 - AluJb SINE Alu -13 299 1 857 152 8 0 chr17 50616364 50616496 -38888057 - AluJb SINE Alu -179 133 1 2129 121 20 0 chr17 50617672 50617970 -38886583 - AluSx SINE Alu -8 304 1 741 171 47 16 chr17 50618503 50618632 -38885921 - FLAM_A SINE Alu 0 133 1 21 0 0 0 chr17 50618632 50618653 -38885900 + AT_rich Low_complexity Low_complexity 1 21 0 248 98 49 0 chr17 50618658 50618699 -38885854 - Alu SINE Alu -190 112 70 2207 122 3 0 chr17 50618913 50619216 -38885337 + AluSx SINE Alu 1 304 -8 219 362 69 44 chr17 50619464 50619782 -38884771 + L2 LINE L2 2329 2654 -660 22 0 0 0 chr17 50619984 50620006 -38884547 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr17 50620162 50620192 -38884361 + AT_rich Low_complexity Low_complexity 1 30 0 873 149 0 0 chr17 50620863 50620997 -38883556 + AluJo SINE Alu 1 134 -178 1778 145 47 39 chr17 50621146 50621205 -38883348 + MER7A DNA MER2_type 8 65 -2973 2172 122 3 0 chr17 50621205 50621508 -38883045 - AluSq SINE Alu -9 304 1 1778 145 47 39 chr17 50621508 50621786 -38882767 + MER7A DNA MER2_type 65 346 0 1451 218 147 53 chr17 50621818 50621980 -38882573 - L1MD2 LINE L1 -10 6349 6204 2025 130 0 7 chr17 50621980 50622285 -38882268 + AluSx SINE Alu 2 304 0 1451 218 147 53 chr17 50622285 50622726 -38881827 - L1MD2 LINE L1 -155 6204 5688 1746 208 69 10 chr17 50622729 50623403 -38881150 - L1MD2 LINE L1 -683 5559 4844 430 202 0 0 chr17 50623404 50623493 -38881060 - L1M3 LINE L1 -508 5675 5587 1425 228 55 51 chr17 50623501 50624310 -38880243 - L1M3 LINE L1 -2368 3778 2893 2155 125 0 0 chr17 50624310 50624597 -38879956 - AluSx SINE Alu -23 289 3 1425 228 55 51 chr17 50624597 50624653 -38879900 - L1M3 LINE L1 -3253 2893 2839 3308 158 119 58 chr17 50625083 50625878 -38878675 - MER21B LTR ERV1 -19 844 1 2052 145 6 3 chr17 50626424 50626735 -38877818 - AluJo SINE Alu 0 312 1 2354 100 7 3 chr17 50626808 50627118 -38877435 + AluSq SINE Alu 1 311 -2 277 279 0 15 chr17 50627590 50627658 -38876895 + CT-rich Low_complexity Low_complexity 2 68 0 1594 180 60 4 chr17 50627661 50627928 -38876625 - AluJo SINE Alu -30 282 1 22 0 0 0 chr17 50627941 50627963 -38876590 + AT_rich Low_complexity Low_complexity 1 22 0 1736 187 10 0 chr17 50628264 50628564 -38875989 + AluJo SINE Alu 2 304 -8 25 51 0 0 chr17 50629998 50630037 -38874516 + AT_rich Low_complexity Low_complexity 1 39 0 976 209 16 5 chr17 50630366 50630553 -38874000 + MER5A DNA MER1_type 1 189 0 2166 114 0 3 chr17 50631255 50631552 -38873001 + AluSx SINE Alu 1 296 -16 233 333 42 8 chr17 50631736 50631856 -38872697 + MER117 DNA MER1_type 2 125 -72 2049 78 12 0 chr17 50632138 50632396 -38872157 + AluSq SINE Alu 21 281 -32 246 32 0 0 chr17 50632413 50632444 -38872109 + (CAGGA)n Simple_repeat Simple_repeat 5 35 0 551 147 10 0 chr17 50632444 50632546 -38872007 + GA-rich Low_complexity Low_complexity 3 105 0 2140 145 0 0 chr17 50632978 50633282 -38871271 + AluSx SINE Alu 1 304 -8 995 228 43 13 chr17 50633318 50633550 -38871003 + MIR SINE MIR 3 241 -21 218 369 85 0 chr17 50633982 50634123 -38870430 - L2 LINE L2 -445 2869 2717 209 260 0 0 chr17 50634188 50634238 -38870315 - L2 LINE L2 -955 2359 2310 587 167 130 0 chr17 50634600 50634708 -38869845 + FLAM_A SINE Alu 4 125 -8 1821 155 31 0 chr17 50634739 50635029 -38869524 + AluSx SINE Alu 1 299 -13 207 0 0 0 chr17 50635302 50635325 -38869228 + (CA)n Simple_repeat Simple_repeat 2 24 0 354 265 44 44 chr17 50635552 50635688 -38868865 - MER112 DNA MER1_type -10 250 115 1566 169 38 42 chr17 50635697 50636010 -38868543 + AluJb SINE Alu 1 312 0 379 282 77 75 chr17 50636063 50636237 -38868316 - MIR SINE MIR -21 241 60 1918 104 11 4 chr17 50636237 50636507 -38868046 - AluSp SINE Alu -2 311 40 425 284 135 0 chr17 50636739 50636880 -38867673 + MER117 DNA MER1_type 9 168 -29 388 268 72 14 chr17 50636939 50637077 -38867476 + MIR SINE MIR 117 262 0 231 255 0 20 chr17 50637182 50637233 -38867320 - L2 LINE L2 -12 3260 3211 996 194 0 6 chr17 50637405 50637580 -38866973 + AluJo SINE Alu 117 290 -22 383 299 99 41 chr17 50638148 50638369 -38866184 - MIR SINE MIR -14 248 15 216 0 0 0 chr17 50638390 50638414 -38866139 + (A)n Simple_repeat Simple_repeat 1 24 0 2005 148 0 10 chr17 50638419 50638729 -38865824 + AluJb SINE Alu 6 312 0 270 340 79 51 chr17 50639274 50639527 -38865026 + L2 LINE L2 2897 3156 -116 629 238 33 66 chr17 50639986 50640230 -38864323 - L1ME3A LINE L1 -205 5965 5730 662 192 152 13 chr17 50640330 50640481 -38864072 + FAM SINE Alu 1 42 -7 346 275 0 0 chr17 50640494 50640574 -38863979 - L1ME3A LINE L1 -519 5651 5572 28 0 0 0 chr17 50640839 50640867 -38863686 + AT_rich Low_complexity Low_complexity 1 28 0 357 322 99 8 chr17 50641139 50641260 -38863293 + L2 LINE L2 3139 3270 -2 374 284 80 49 chr17 50641509 50641733 -38862820 + MIR SINE MIR 6 241 -21 30 0 0 0 chr17 50642548 50642578 -38861975 + AT_rich Low_complexity Low_complexity 1 30 0 2420 59 0 16 chr17 50642624 50642927 -38861626 - AluY SINE Alu -13 298 1 615 161 0 0 chr17 50643057 50643144 -38861409 - AluJ/FLAM SINE Alu -223 89 3 891 146 122 94 chr17 50643294 50643507 -38861046 + MER20 DNA MER1_type 1 219 0 2151 99 0 3 chr17 50644736 50645046 -38859507 - AluSx SINE Alu 0 309 1 25 0 0 0 chr17 50645252 50645277 -38859276 + AT_rich Low_complexity Low_complexity 1 25 0 278 325 57 16 chr17 50647624 50647747 -38856806 + MIR SINE MIR 20 147 -115 642 158 86 43 chr17 50648202 50648341 -38856212 - MER3 DNA MER1_type -25 184 40 638 247 153 34 chr17 50648355 50648732 -38855821 - MLT1H LTR MaLR -171 384 2 861 246 81 56 chr17 50648792 50648920 -38855633 - L3 LINE CR1 -467 1110 987 2226 102 0 3 chr17 50648920 50649213 -38855340 - AluSg SINE Alu -18 292 1 861 246 81 56 chr17 50649213 50649368 -38855185 - L3 LINE CR1 -590 987 820 2341 88 3 0 chr17 50649517 50649812 -38854741 + AluSp SINE Alu 1 296 -17 2313 82 0 3 chr17 50649812 50650106 -38854447 + AluY SINE Alu 1 293 -18 292 256 93 159 chr17 50650637 50650713 -38853840 + L2 LINE L2 1989 2068 -1246 180 0 0 0 chr17 50650713 50650733 -38853820 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2134 109 0 0 chr17 50650736 50651012 -38853541 - AluSx SINE Alu -36 276 1 292 256 93 159 chr17 50651012 50651193 -38853360 + L2 LINE L2 2070 2206 -1108 2205 113 20 0 chr17 50651193 50651494 -38853059 - AluSx SINE Alu -5 307 1 292 256 93 159 chr17 50651494 50651715 -38852838 + L2 LINE L2 2206 2440 -874 1262 156 45 12 chr17 50651722 50651966 -38852587 - MER34 LTR ERV1 -281 261 10 1777 130 72 7 chr17 50652209 50652485 -38852068 - AluJb SINE Alu -18 294 1 1810 110 18 29 chr17 50652497 50652674 -38851879 - AluSx SINE Alu -7 305 131 2427 84 3 0 chr17 50652674 50652973 -38851580 - AluSp SINE Alu -13 300 1 1810 110 18 29 chr17 50652973 50653068 -38851485 - AluSx SINE Alu -181 131 36 648 298 43 79 chr17 50653074 50653443 -38851110 + L2 LINE L2 2917 3272 0 1472 235 55 37 chr17 50653490 50653873 -38850680 + MLT1B LTR MaLR 1 390 0 388 366 61 34 chr17 50654007 50654302 -38850251 + L2 LINE L2 2932 3234 -38 28 0 0 0 chr17 50654302 50654330 -38850223 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr17 50654377 50654407 -38850146 + AT_rich Low_complexity Low_complexity 1 30 0 2587 62 0 0 chr17 50654537 50654842 -38849711 - AluY SINE Alu -6 305 1 1920 128 31 0 chr17 50655003 50655293 -38849260 + MER47A DNA MER2_type 27 325 -41 1531 167 15 70 chr17 50656149 50656397 -38848156 + AluJo SINE Alu 1 228 -84 2238 92 0 23 chr17 50656397 50656700 -38847853 + AluY SINE Alu 1 296 -15 1531 167 15 70 chr17 50656700 50656780 -38847773 + AluJo SINE Alu 228 311 -1 474 129 0 0 chr17 50656867 50656929 -38847624 - AluJ/FLAM SINE Alu -249 63 2 231 257 57 29 chr17 50656948 50657018 -38847535 - L2 LINE L2 -74 3198 3127 208 222 22 0 chr17 50657128 50657173 -38847380 + MIR SINE MIR 213 258 -4 1934 142 13 16 chr17 50657182 50657485 -38847068 - AluJb SINE Alu -10 302 1 317 196 33 54 chr17 50657905 50657997 -38846556 + MIR SINE MIR 48 137 -71 2284 102 10 0 chr17 50658334 50658638 -38845915 + AluSx SINE Alu 1 307 -5 2138 107 16 7 chr17 50658889 50659197 -38845356 - AluSp SINE Alu -2 311 1 3459 125 75 77 chr17 50659349 50659424 -38845129 - Charlie5 DNA MER1_type -96 2528 2454 2297 103 3 0 chr17 50659424 50659726 -38844827 - AluSx SINE Alu -9 303 1 3459 125 75 77 chr17 50659726 50660379 -38844174 - Charlie5 DNA MER1_type -170 2454 1801 1844 132 8 0 chr17 50660381 50660669 -38843884 - AluSx SINE Alu 0 311 22 531 301 53 45 chr17 50660735 50661001 -38843552 - L1MEd LINE L1 -5019 1100 833 560 220 68 15 chr17 50661885 50662017 -38842536 - MIR SINE MIR -18 244 106 1071 171 6 0 chr17 50662017 50662187 -38842366 + AluJb SINE Alu 129 299 -13 257 281 0 0 chr17 50662189 50662253 -38842300 - MIR SINE MIR -186 76 13 2175 118 0 28 chr17 50662815 50663136 -38841417 + AluSx SINE Alu 1 312 0 1555 174 27 34 chr17 50663751 50664044 -38840509 - AluJb SINE Alu -21 291 1 291 298 215 16 chr17 50665256 50665447 -38839106 - MIR SINE MIR -6 256 28 283 254 159 4 chr17 50665972 50666078 -38838475 - MIR SINE MIR -64 144 21 483 241 86 40 chr17 50666536 50666710 -38837843 + MIR3 SINE MIR 6 187 -21 328 253 48 0 chr17 50666799 50666882 -38837671 - MIR3 SINE MIR -24 184 98 631 267 17 73 chr17 50667242 50667383 -38837170 + MIR SINE MIR 23 148 -114 1630 166 0 71 chr17 50667383 50667709 -38836844 + AluJo SINE Alu 1 303 -9 631 267 17 73 chr17 50667709 50667799 -38836754 + MIR SINE MIR 148 241 -21 271 119 17 17 chr17 50667800 50667859 -38836694 + (CA)n Simple_repeat Simple_repeat 1 59 0 261 333 22 33 chr17 50667859 50667949 -38836604 - MIR3 SINE MIR -116 92 4 22 0 0 0 chr17 50668746 50668768 -38835785 + GC_rich Low_complexity Low_complexity 1 22 0 201 196 18 18 chr17 50668779 50668835 -38835718 + (CGGGA)n Simple_repeat Simple_repeat 1 56 0 320 231 116 26 chr17 50670392 50670558 -38833995 - L1MEc LINE L1 -4116 2280 2130 315 0 0 0 chr17 50670558 50670593 -38833960 + (TG)n Simple_repeat Simple_repeat 2 36 0 320 231 116 26 chr17 50670593 50670686 -38833867 - L1MEc LINE L1 -4266 2130 1980 3083 110 66 112 chr17 50670686 50671305 -38833248 + MER4B LTR ERV1 1 591 -19 3061 175 79 100 chr17 50671421 50671753 -38832800 - L1MC4a LINE L1 0 7808 7470 1931 114 0 78 chr17 50671753 50671888 -38832665 + AluSx SINE Alu 1 145 -163 2042 121 4 4 chr17 50671888 50672168 -38832385 + AluSx SINE Alu 1 280 -32 1931 114 0 78 chr17 50672168 50672364 -38832189 + AluSx SINE Alu 145 308 0 3061 175 79 100 chr17 50672364 50672968 -38831585 - L1MC4a LINE L1 -338 7470 6891 209 311 0 0 chr17 50673011 50673072 -38831481 - L3 LINE CR1 -319 1258 1198 1743 187 0 3 chr17 50673073 50673405 -38831148 - AluJo SINE Alu 0 331 1 950 274 64 50 chr17 50673405 50673424 -38831129 - L1MEc LINE L1 -4926 1470 1453 2269 115 0 0 chr17 50673424 50673729 -38830824 - AluSx SINE Alu -7 305 1 950 274 64 50 chr17 50673729 50674303 -38830250 - L1MEc LINE L1 -4943 1453 869 732 165 0 0 chr17 50674334 50674437 -38830116 + FLAM_A SINE Alu 18 120 -22 258 127 0 36 chr17 50674437 50674492 -38830061 + FAM SINE Alu 127 179 0 832 219 7 0 chr17 50674628 50674783 -38829770 + FRAM SINE Alu 1 156 -20 4136 132 18 25 chr17 50675036 50675278 -38829275 - L1MC1 LINE L1 -2 6331 6089 2325 103 0 0 chr17 50675278 50675579 -38828974 - AluSx SINE Alu -11 301 1 4136 132 18 25 chr17 50675579 50676012 -38828541 - L1MC1 LINE L1 -244 6089 5661 709 179 12 0 chr17 50676013 50676149 -38828404 - L1MC1 LINE L1 -695 5471 5333 591 349 23 14 chr17 50676401 50676753 -38827800 - L1MEc LINE L1 -6014 382 28 311 343 9 9 chr17 50677256 50677361 -38827192 + MIR SINE MIR 36 140 -122 293 348 59 0 chr17 50677774 50677892 -38826661 - L2 LINE L2 -3 3269 3145 758 181 7 14 chr17 50678450 50678747 -38825806 + GA-rich Low_complexity Low_complexity 1 295 0 1671 251 113 6 chr17 50679440 50679978 -38824575 - L1ME3A LINE L1 -12 6158 5563 2648 257 117 25 chr17 50680085 50681175 -38823378 - L1ME3A LINE L1 -1327 4819 3630 303 231 53 63 chr17 50681286 50681458 -38823095 - L1M LINE L1 -863 5428 5266 200 214 18 0 chr17 50681633 50681689 -38822864 + (TA)n Simple_repeat Simple_repeat 1 57 0 3338 204 18 4 chr17 50681813 50682519 -38822034 + L1 LINE L1 3829 4544 -1602 335 324 106 40 chr17 50683601 50683876 -38820677 - L2 LINE L2 -65 3207 2915 2081 127 10 3 chr17 50684044 50684335 -38820218 + AluSx SINE Alu 16 308 -4 3502 126 51 94 chr17 50684341 50685188 -38819365 + L1MA7 LINE L1 5467 6276 -15 33 25 0 0 chr17 50685190 50685230 -38819323 + AT_rich Low_complexity Low_complexity 1 40 0 215 186 0 23 chr17 50685352 50685395 -38819158 - MIR SINE MIR -130 132 91 28 0 0 0 chr17 50686029 50686057 -38818496 + GC_rich Low_complexity Low_complexity 1 28 0 733 291 114 3 chr17 50686851 50687123 -38817430 + L2 LINE L2 1672 1991 -1323 1355 153 71 71 chr17 50687123 50687417 -38817136 - AluJo SINE Alu -18 294 1 733 291 114 3 chr17 50687417 50687487 -38817066 + L2 LINE L2 1991 2052 -1262 1212 260 99 26 chr17 50687487 50687998 -38816555 + L2 LINE L2 2678 3237 -76 424 58 14 14 chr17 50687998 50688067 -38816486 + (TA)n Simple_repeat Simple_repeat 1 69 0 1212 260 99 26 chr17 50688067 50688150 -38816403 + L2 LINE L2 3237 3313 0 254 234 0 31 chr17 50688516 50688580 -38815973 + CT-rich Low_complexity Low_complexity 3 64 0 1995 135 21 0 chr17 50689236 50689555 -38814998 - AluSg1 SINE Alu 0 309 1 2107 103 17 10 chr17 50689555 50689847 -38814706 - AluSc SINE Alu -15 294 1 423 281 52 0 chr17 50689904 50690000 -38814553 + MIR SINE MIR 20 120 -142 966 167 51 102 chr17 50690934 50691209 -38813344 - MER92B LTR ERV1 -2 634 374 * 1361 149 32 4 chr17 50691205 50691454 -38813099 - MER92B LTR ERV1 -380 256 1 5254 133 43 4 chr17 50692407 50693506 -38811047 - L1PB3 LINE L1 -1 6153 5012 5009 138 29 1 chr17 50693509 50694351 -38810202 - L1MC1 LINE L1 -8 6325 5461 5045 149 31 36 chr17 50694376 50696224 -38808329 - L1MA7 LINE L1 -2 6289 4457 1077 158 59 30 chr17 50696237 50696609 -38807944 - L1MC1 LINE L1 -743 5403 5090 1813 174 7 0 chr17 50696727 50697020 -38807533 + AluJo SINE Alu 1 295 -17 2118 134 134 8 chr17 50697665 50698045 -38806508 - MSTA LTR MaLR 0 428 1 2141 103 0 55 chr17 50698223 50698386 -38806167 - AluSg SINE Alu -15 295 156 2363 94 0 0 chr17 50698386 50698684 -38805869 - AluY SINE Alu -13 298 1 2141 103 0 55 chr17 50698684 50698832 -38805721 - AluSg SINE Alu -154 156 1 26 50 0 0 chr17 50698946 50698986 -38805567 + AT_rich Low_complexity Low_complexity 1 40 0 917 135 198 0 chr17 50699377 50699584 -38804969 + L1PB4 LINE L1 5909 6156 0 1430 170 59 56 chr17 50699693 50700150 -38804403 - LTR56 LTR ERV1 0 445 9 361 240 56 100 chr17 50700271 50700337 -38804216 - MER112 DNA MER1_type -17 243 176 1905 178 0 0 chr17 50700337 50700641 -38803912 - AluJo SINE Alu -6 306 3 361 240 56 100 chr17 50700641 50700824 -38803729 - MER112 DNA MER1_type -84 176 5 258 44 22 0 chr17 50701002 50701047 -38803506 + L1MA7 LINE L1 6245 6290 -1 34 55 0 0 chr17 50701057 50701112 -38803441 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr17 50701156 50701177 -38803376 + AT_rich Low_complexity Low_complexity 1 21 0 1887 131 70 43 chr17 50701381 50701709 -38802844 - MER1B DNA MER1_type 0 337 1 438 132 0 15 chr17 50701741 50701809 -38802744 + AluS SINE Alu 229 295 -14 1745 186 111 127 chr17 50701910 50702441 -38802112 + L1MC5 LINE L1 6693 7231 -730 878 203 11 40 chr17 50702441 50702618 -38801935 + FAM SINE Alu 1 172 -3 1745 186 111 127 chr17 50702618 50702684 -38801869 + L1MC5 LINE L1 7231 7297 -664 2030 132 9 49 chr17 50702684 50703009 -38801544 - AluSx SINE Alu 0 312 1 1745 186 111 127 chr17 50703009 50703459 -38801094 + L1MC5 LINE L1 7297 7720 -241 1757 146 44 14 chr17 50703459 50703754 -38800799 - AluSx SINE Alu -8 304 1 1745 186 111 127 chr17 50703754 50703956 -38800597 + L1MC5 LINE L1 7720 7924 -37 409 238 69 49 chr17 50704384 50704655 -38799898 - MLT1C LTR MaLR -161 306 27 1494 316 54 28 chr17 50704707 50705688 -38798865 - L1MEd LINE L1 -4865 1254 248 26 50 0 0 chr17 50706073 50706113 -38798440 + AT_rich Low_complexity Low_complexity 1 40 0 505 260 72 28 chr17 50706508 50706689 -38797864 + MIR3 SINE MIR 11 199 -9 182 392 59 0 chr17 50707876 50708029 -38796524 + L2 LINE L2 1206 1367 -1947 24 53 0 0 chr17 50708039 50708077 -38796476 + AT_rich Low_complexity Low_complexity 1 38 0 2812 164 12 37 chr17 50708136 50708704 -38795849 - L1MB1 LINE L1 -1 6167 5614 245 363 97 0 chr17 50708904 50709028 -38795525 + L2 LINE L2 1764 1899 -1415 1694 166 6 66 chr17 50709070 50709389 -38795164 + AluJo SINE Alu 1 300 -12 966 199 183 6 chr17 50710689 50711089 -38793464 - L1ME LINE L1 -663 5503 5064 2857 25 0 0 chr17 50711849 50712167 -38792386 - AluYb8 SINE Alu 0 318 1 23 33 0 0 chr17 50712269 50712299 -38792254 + AT_rich Low_complexity Low_complexity 1 30 0 2521 176 24 18 chr17 50713010 50713373 -38791180 - L1PB4 LINE L1 -1 6871 6512 234 0 0 0 chr17 50713373 50713399 -38791154 + (TG)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr17 50713398 50713422 -38791131 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 2521 176 24 18 chr17 50713399 50713993 -38790560 - L1PB4 LINE L1 -360 6512 5923 2502 60 0 3 chr17 50713993 50714295 -38790258 - AluY SINE Alu -10 301 1 2521 176 24 18 chr17 50714295 50715354 -38789199 - L1PB4 LINE L1 -949 5923 4688 2136 122 0 3 chr17 50715369 50715689 -38788864 - AluSx SINE Alu 0 319 1 12236 116 98 23 chr17 50715946 50717664 -38786889 - L1PB4 LINE L1 -2972 3890 2302 2406 90 0 0 chr17 50717664 50717963 -38786590 - AluSc SINE Alu -9 300 2 12236 116 98 23 chr17 50717963 50719271 -38785282 - L1PB4 LINE L1 -4560 2302 636 656 199 7 0 chr17 50719273 50719409 -38785144 - L1PB4 LINE L1 -6663 200 64 2046 85 4 0 chr17 50719550 50719808 -38784745 - AluSx SINE Alu -53 259 1 441 141 0 0 chr17 50719915 50719986 -38784567 + L1PBa LINE L1 1 71 -6792 409 207 98 30 chr17 50720528 50720731 -38783822 - L1M4 LINE L1 -754 5392 5176 1138 186 12 12 chr17 50720875 50721122 -38783431 - L1M4 LINE L1 -6289 253 7 1899 153 3 7 chr17 50721144 50721439 -38783114 + AluJb SINE Alu 1 294 -18 7265 39 8 0 chr17 50721718 50722953 -38781600 - L1PA3 LINE L1 0 6155 4915 26 64 0 0 chr17 50722987 50723034 -38781519 + AT_rich Low_complexity Low_complexity 1 47 0 22 56 0 0 chr17 50723089 50723125 -38781428 + AT_rich Low_complexity Low_complexity 1 36 0 202 211 0 0 chr17 50723629 50723667 -38780886 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 7985 37 41 14 chr17 50724154 50724836 -38779717 + LTR13 LTR ERVK 1 718 -289 201 39 0 0 chr17 50724836 50724862 -38779691 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 7985 37 41 14 chr17 50724862 50725160 -38779393 + LTR13 LTR ERVK 718 1007 0 1593 210 17 0 chr17 50725164 50725455 -38779098 - AluJo SINE Alu -16 296 1 472 345 59 78 chr17 50725457 50725831 -38778722 - L2 LINE L2 0 3272 2906 203 286 186 0 chr17 50726179 50726249 -38778304 + MIR SINE MIR 151 233 -29 214 214 71 0 chr17 50726265 50726321 -38778232 + L2 LINE L2 2440 2499 -815 1974 88 4 0 chr17 50726433 50726683 -38777870 - AluSc SINE Alu -42 267 17 710 362 115 24 chr17 50726684 50727355 -38777198 + L2 LINE L2 2550 3272 0 268 367 82 0 chr17 50732122 50732220 -38772333 - L2 LINE L2 -44 3228 3123 22 0 0 0 chr17 50732825 50732847 -38771706 + GC_rich Low_complexity Low_complexity 1 22 0 378 310 175 54 chr17 50732848 50733367 -38771186 - L1M2 LINE L1 -5624 1225 644 225 154 0 0 chr17 50733414 50733453 -38771100 + CT-rich Low_complexity Low_complexity 2 40 0 250 57 0 0 chr17 50733914 50733949 -38770604 + (TTTA)n Simple_repeat Simple_repeat 2 160 0 2157 82 7 0 chr17 50733949 50734231 -38770322 - AluSx SINE Alu -28 284 1 2368 80 7 0 chr17 50734371 50734672 -38769881 - AluSc SINE Alu -6 303 1 288 70 0 0 chr17 50734921 50734964 -38769589 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 881 133 0 15 chr17 50735136 50735271 -38769282 + FLAM_C SINE Alu 1 133 -10 444 301 190 13 chr17 50735875 50736092 -38768461 + MIR SINE MIR 10 262 0 358 200 152 9 chr17 50736392 50736497 -38768056 + L2 LINE L2 3187 3306 -7 1521 198 6 74 chr17 50737410 50737566 -38766987 - L1ME1 LINE L1 -8 6158 5993 911 155 0 0 chr17 50737566 50737695 -38766858 - FLAM_C SINE Alu -2 131 3 1521 198 6 74 chr17 50737695 50737901 -38766652 - L1ME1 LINE L1 -173 5993 5821 309 153 17 17 chr17 50738315 50738374 -38766179 - U7 snRNA snRNA -3 60 2 2409 67 3 0 chr17 50738572 50738879 -38765674 + AluSp SINE Alu 1 308 0 256 291 26 86 chr17 50739108 50739225 -38765328 + MIR SINE MIR 20 129 -133 1872 124 7 17 chr17 50739783 50740073 -38764480 - L1MA8 LINE L1 -2 6289 6003 861 271 42 75 chr17 50740249 50740473 -38764080 - L1MC4a LINE L1 0 6121 5891 2286 110 0 0 chr17 50740473 50740773 -38763780 - AluSx SINE Alu -12 300 1 861 271 42 75 chr17 50740773 50741138 -38763415 - L1MC4a LINE L1 -230 5891 5536 470 264 34 73 chr17 50741508 50741686 -38762867 - MIR3 SINE MIR -22 186 16 223 200 186 0 chr17 50741795 50741865 -38762688 - MIR SINE MIR -6 256 174 259 343 19 9 chr17 50742013 50742118 -38762435 - MIR SINE MIR -86 122 17 260 250 47 0 chr17 50742349 50742413 -38762140 + L2 LINE L2 3023 3089 -224 2060 133 7 0 chr17 50742447 50742741 -38761812 - AluSx SINE Alu -16 296 1 2627 155 8 78 chr17 50742741 50743324 -38761229 - L1 LINE L1 -815 5513 4974 2217 110 0 0 chr17 50743324 50743614 -38760939 - AluSx SINE Alu -22 290 1 2627 155 8 78 chr17 50743614 50743649 -38760904 - L1 LINE L1 -1354 4974 4938 782 62 0 0 chr17 50743649 50743745 -38760808 - THE1B LTR MaLR 0 364 269 3093 262 77 35 chr17 50743745 50745249 -38759304 - L1M1 LINE L1 -3957 3608 2043 333 182 0 30 chr17 50745244 50745310 -38759243 - L1 LINE L1 -5164 1088 1025 * 26 30 0 0 chr17 50745421 50745454 -38759099 + AT_rich Low_complexity Low_complexity 1 33 0 183 229 42 0 chr17 50745553 50745601 -38758952 + MIR SINE MIR 163 212 -50 824 141 83 0 chr17 50746793 50746914 -38757639 - AluJo SINE Alu -176 136 6 420 173 0 0 chr17 50746915 50746990 -38757563 + L1MB4 LINE L1 6046 6120 -60 1586 187 0 17 chr17 50746996 50747296 -38757257 - AluJo SINE Alu -17 295 1 1778 203 45 5 chr17 50748333 50748712 -38755841 - L1MC4a LINE L1 -99 7709 7316 267 79 0 0 chr17 50748865 50748903 -38755650 + (CA)n Simple_repeat Simple_repeat 2 39 0 1723 167 0 0 chr17 50748904 50749162 -38755391 - AluSx SINE Alu -54 258 1 380 250 87 0 chr17 50750629 50750721 -38753832 + L2 LINE L2 3168 3267 -5 184 273 118 82 chr17 50751049 50751159 -38753394 + MIR SINE MIR 72 185 -77 327 210 170 0 chr17 50751328 50751428 -38753125 - L1MB7 LINE L1 -1 6183 6067 28072 116 29 76 chr17 50751792 50752575 -38751978 - L1PA7 LINE L1 -11 6143 5325 1958 118 0 7 chr17 50752575 50752847 -38751706 - AluSc SINE Alu -4 305 36 28072 116 29 76 chr17 50752847 50756473 -38748080 - L1PA7 LINE L1 -829 5325 2129 2414 60 3 7 chr17 50756473 50756771 -38747782 - AluY SINE Alu -14 297 1 28072 116 29 76 chr17 50756771 50758796 -38745757 - L1PA7 LINE L1 -4025 2129 12 2284 212 23 0 chr17 50758808 50759289 -38745264 - L1 LINE L1 -3291 2855 2364 * 4493 220 22 2 chr17 50759288 50760233 -38744320 - L1 LINE L1 -4351 977 14 2023 217 36 16 chr17 50760249 50760742 -38743811 - L1ME1 LINE L1 -304 5862 5360 1546 187 7 17 chr17 50760745 50761034 -38743519 - AluJo SINE Alu -22 290 5 197 159 23 0 chr17 50761880 50761924 -38742629 + (TG)n Simple_repeat Simple_repeat 2 46 0 186 43 0 0 chr17 50762025 50762048 -38742505 + (CA)n Simple_repeat Simple_repeat 1 23 0 315 71 0 0 chr17 50762609 50762651 -38741902 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 1577 185 14 7 chr17 50762656 50762942 -38741611 - AluJo SINE Alu -24 288 1 25 31 0 0 chr17 50763365 50763397 -38741156 + AT_rich Low_complexity Low_complexity 1 32 0 37 23 0 0 chr17 50763481 50763525 -38741028 + AT_rich Low_complexity Low_complexity 1 44 0 425 192 80 16 chr17 50763765 50763890 -38740663 + L1MC5 LINE L1 7799 7931 -30 1147 237 168 49 chr17 50763943 50764802 -38739751 + L1ME LINE L1 4478 5445 -733 570 182 0 0 chr17 50764823 50764911 -38739642 - FLAM_A SINE Alu -54 88 1 550 268 61 31 chr17 50764990 50765218 -38739335 + L1ME LINE L1 5551 5785 -385 1251 140 11 0 chr17 50765241 50765475 -38739078 + AluSg/x SINE Alu 102 337 0 22 94 0 0 chr17 50765623 50765687 -38738866 + AT_rich Low_complexity Low_complexity 1 64 0 414 332 108 8 chr17 50766705 50766946 -38737607 + L2 LINE L2 932 1196 -2118 271 264 56 40 chr17 50766994 50767119 -38737434 + L2 LINE L2 2632 2758 -556 22 0 0 0 chr17 50767272 50767294 -38737259 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr17 50767855 50767887 -38736666 + AT_rich Low_complexity Low_complexity 1 32 0 1872 124 7 17 chr17 50769217 50769507 -38735046 - L1MA8 LINE L1 -2 6289 6003 2205 108 0 0 chr17 50769907 50770194 -38734359 - AluSx SINE Alu -12 300 14 2288 94 10 0 chr17 50770210 50770507 -38734046 - AluY SINE Alu -11 300 1 340 179 30 15 chr17 50770550 50770617 -38733936 - AluJ/FRAM SINE Alu -3 299 232 410 248 35 48 chr17 50770681 50770826 -38733727 - LTR37B LTR ERV1 -321 147 5 529 49 25 12 chr17 50770826 50770907 -38733646 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 2272 116 0 3 chr17 50770917 50771228 -38733325 - AluSx SINE Alu -2 310 1 267 300 10 50 chr17 50771836 50771936 -38732617 - MIR SINE MIR -147 115 20 186 329 13 40 chr17 50772209 50772285 -38732268 + MIR3 SINE MIR 107 180 -28 807 163 23 8 chr17 50772967 50773096 -38731457 - FLAM_C SINE Alu -11 132 2 2300 110 0 0 chr17 50774949 50775249 -38729304 - AluSx SINE Alu -12 300 1 860 271 22 33 chr17 50775341 50775614 -38728939 - L1MC/D LINE L1 -2003 5805 5536 470 264 34 73 chr17 50775983 50776161 -38728392 - MIR3 SINE MIR -22 186 16 223 200 186 0 chr17 50776270 50776340 -38728213 - MIR SINE MIR -6 256 174 259 343 19 9 chr17 50776488 50776593 -38727960 - MIR SINE MIR -86 122 17 260 250 47 0 chr17 50776824 50776888 -38727665 + L2 LINE L2 3023 3089 -224 2055 132 3 0 chr17 50776922 50777217 -38727336 - AluSx SINE Alu -16 296 1 987 296 155 26 chr17 50777303 50777341 -38727212 + L2 LINE L2 2429 2461 -852 2454 139 139 0 chr17 50777341 50777757 -38726796 - MER101 LTR ERV1 0 474 1 987 296 155 26 chr17 50777757 50778490 -38726063 + L2 LINE L2 2461 3300 -13 186 103 0 0 chr17 50778491 50778520 -38726033 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 1913 184 94 18 chr17 50778710 50779144 -38725409 - MLT1C LTR MaLR 0 467 1 1722 165 0 14 chr17 50780018 50780297 -38724256 - AluJb SINE Alu -24 288 14 336 241 9 74 chr17 50780515 50780535 -38724018 - MIR SINE MIR 0 262 242 180 0 0 0 chr17 50780535 50780555 -38723998 + (CAG)n Simple_repeat Simple_repeat 1 20 0 336 241 9 74 chr17 50780555 50780642 -38723911 - MIR SINE MIR -20 242 162 2972 86 0 21 chr17 50781292 50781675 -38722878 - THE1C LTR MaLR 0 375 1 11193 104 30 35 chr17 50781675 50783264 -38721289 - THE1C-int LTR MaLR 0 1580 1 2773 118 11 8 chr17 50783264 50783638 -38720915 - THE1C LTR MaLR 0 375 1 252 329 0 0 chr17 50784580 50784653 -38719900 - MIR SINE MIR -121 141 69 923 231 33 81 chr17 50784736 50785069 -38719484 - LTR37B LTR ERV1 0 468 110 403 176 0 0 chr17 50785108 50785176 -38719377 - MLT1A2 LTR MaLR 0 374 307 1984 108 3 30 chr17 50785176 50785481 -38719072 - AluSq SINE Alu -14 299 3 2205 91 10 0 chr17 50785485 50785782 -38718771 - AluY SINE Alu -11 300 1 338 179 30 15 chr17 50785825 50785892 -38718661 - AluJ/FRAM SINE Alu -3 299 232 392 248 35 48 chr17 50785956 50786101 -38718452 - LTR37B LTR ERV1 -321 147 5 529 49 25 12 chr17 50786101 50786182 -38718371 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 2165 116 0 3 chr17 50786192 50786503 -38718050 - AluSx SINE Alu -2 310 1 270 300 10 50 chr17 50787111 50787211 -38717342 - MIR SINE MIR -147 115 20 185 329 13 40 chr17 50787484 50787560 -38716993 + MIR3 SINE MIR 107 180 -28 753 163 23 8 chr17 50788242 50788371 -38716182 - FLAM_C SINE Alu -11 132 2 207 161 0 0 chr17 50788614 50788645 -38715908 + polypyrimidine Low_complexity Low_complexity 2 32 0 208 319 0 14 chr17 50790691 50790760 -38713793 + MER5B DNA MER1_type 29 96 -82 894 179 0 0 chr17 50790876 50791027 -38713526 + FAM SINE Alu 18 168 -17 261 127 197 0 chr17 50791029 50791100 -38713453 - MER53 DNA DNA -11 178 94 1992 100 28 10 chr17 50791735 50792024 -38712529 + AluSp SINE Alu 2 295 -18 2129 124 7 13 chr17 50792084 50792391 -38712162 + MER1B DNA MER1_type 35 339 0 1821 163 0 0 chr17 50793779 50794085 -38710468 - AluSx SINE Alu -6 306 1 548 227 4 164 chr17 50794357 50794613 -38709940 + MIR SINE MIR 37 251 -11 412 320 153 0 chr17 50794830 50794980 -38709573 - MIR3 SINE MIR -16 192 20 463 255 35 135 chr17 50795198 50795331 -38709222 - MIR SINE MIR 0 262 170 1179 143 27 62 chr17 50795331 50795379 -38709174 - L1MB3 LINE L1 -4 6179 6131 2069 128 0 0 chr17 50795379 50795677 -38708876 - AluSx SINE Alu -14 298 1 1179 143 27 62 chr17 50795677 50795887 -38708666 - L1MB3 LINE L1 -52 6131 5930 463 255 35 135 chr17 50795887 50796040 -38708513 - MIR SINE MIR -92 170 3 273 345 12 0 chr17 50796055 50796139 -38708414 - L2 LINE L2 -38 3234 3150 189 74 0 0 chr17 50796304 50796331 -38708222 + (CTATT)n Simple_repeat Simple_repeat 4 30 0 317 263 12 0 chr17 50796335 50796415 -38708138 + MER112 DNA MER1_type 179 259 -1 689 118 0 18 chr17 50796490 50796600 -38707953 - FLAM_C SINE Alu 0 143 36 344 252 39 39 chr17 50797123 50797232 -38707321 + MIR SINE MIR 6 114 -94 209 69 0 0 chr17 50797234 50797263 -38707290 + L2 LINE L2 3273 3301 -12 1687 152 10 20 chr17 50798758 50799060 -38705493 + AluJb SINE Alu 1 299 -13 478 289 139 26 chr17 50799297 50799491 -38705062 - MIR SINE MIR -40 222 7 208 340 278 21 chr17 50800702 50800846 -38703707 - MER91A DNA MER1_type -1 195 15 1602 176 0 11 chr17 50801052 50801331 -38703222 + AluJo SINE Alu 1 276 -36 1368 156 141 0 chr17 50801341 50801610 -38702943 - AluJo SINE Alu 0 312 6 354 45 0 0 chr17 50801630 50801674 -38702879 + (GA)n Simple_repeat Simple_repeat 2 45 0 570 324 173 8 chr17 50801677 50802048 -38702505 + L3b LINE CR1 1145 1576 -7 284 302 50 94 chr17 50802138 50802436 -38702117 - L2 LINE L2 -10 3262 2978 1167 121 43 43 chr17 50802758 50802965 -38701588 - AluJo SINE Alu -19 293 87 263 93 23 0 chr17 50803875 50803918 -38700635 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 802 152 199 0 chr17 50806437 50806608 -38697945 - MER3 DNA MER1_type -4 205 1 2232 89 3 0 chr17 50807040 50807333 -38697220 - AluSc SINE Alu -15 294 1 942 237 188 9 chr17 50809228 50809574 -38694979 + LTR16A1 LTR ERVL 44 451 -6 1598 165 0 0 chr17 50809705 50809966 -38694587 - AluJo SINE Alu -51 261 1 235 170 0 75 chr17 50809968 50810021 -38694532 - L2 LINE L2 -568 2746 2698 1174 166 32 37 chr17 50810021 50810238 -38694315 + MER20 DNA MER1_type 1 216 -3 503 254 9 9 chr17 50810637 50810751 -38693802 + MIR SINE MIR 9 122 -140 1690 135 22 4 chr17 50810826 50811100 -38693453 + AluSx SINE Alu 21 299 -13 1165 200 0 4 chr17 50811114 50811344 -38693209 + AluJo SINE Alu 84 312 0 27 0 0 0 chr17 50811546 50811573 -38692980 + AT_rich Low_complexity Low_complexity 1 27 0 964 226 6 0 chr17 50813410 50813587 -38690966 + MER45A DNA AcHobo 1 178 0 198 0 0 0 chr17 50813779 50813801 -38690752 + (TG)n Simple_repeat Simple_repeat 2 23 0 277 116 232 0 chr17 50814291 50814360 -38690193 - MIR SINE MIR -29 179 94 314 267 215 41 chr17 50815166 50815338 -38689215 - MIR SINE MIR -56 206 5 227 261 54 22 chr17 50815392 50815484 -38689069 + MIR SINE MIR 41 135 -127 565 255 161 0 chr17 50815725 50815886 -38688667 - MIR SINE MIR -23 239 53 370 183 43 11 chr17 50816765 50816858 -38687695 - MER53 DNA DNA -76 113 18 2163 123 0 0 chr17 50816860 50817170 -38687383 - AluSx SINE Alu -2 310 1 902 236 12 62 chr17 50818119 50818361 -38686192 - MIR SINE MIR -5 257 28 492 292 38 48 chr17 50818407 50818535 -38686018 - Charlie8 DNA MER1_type -50 280 153 1581 191 3 10 chr17 50818535 50818839 -38685714 - AluJb SINE Alu -10 302 1 492 292 38 48 chr17 50818839 50818919 -38685634 - Charlie8 DNA MER1_type -177 153 74 2023 110 7 0 chr17 50818922 50819242 -38685311 - AluSq SINE Alu 0 322 1 1208 136 5 28 chr17 50819247 50819461 -38685092 - L1PA15 LINE L1 -2 6163 5955 275 145 14 0 chr17 50820356 50820425 -38684128 + (TG)n Simple_repeat Simple_repeat 2 71 0 358 384 24 6 chr17 50821825 50821989 -38682564 + MIR3 SINE MIR 41 207 -1 2113 117 0 0 chr17 50822984 50823282 -38681271 - AluSq SINE Alu -15 298 1 2434 55 0 10 chr17 50823347 50823657 -38680896 - AluY SINE Alu -4 307 1 1064 121 0 6 chr17 50823930 50824096 -38680457 - AluSg/x SINE Alu -11 301 137 2113 121 0 0 chr17 50824099 50824404 -38680149 - AluSx SINE Alu -7 305 1 1055 182 11 0 chr17 50824626 50824813 -38679740 + MER5A DNA MER1_type 1 189 0 1455 202 24 14 chr17 50825296 50825588 -38678965 - AluJb SINE Alu -17 295 1 466 232 30 0 chr17 50826585 50826684 -38677869 + MLT1J LTR MaLR 1 102 -409 254 157 39 0 chr17 50826696 50826747 -38677806 + L1 LINE L1 4269 4321 -1825 577 304 36 0 chr17 50826747 50826915 -38677638 + MLT1J LTR MaLR 123 296 -215 772 145 0 51 chr17 50826953 50827091 -38677462 - FLAM_A SINE Alu -1 132 2 3119 180 19 0 chr17 50827098 50827620 -38676933 - MLT1F1 LTR MaLR 0 567 36 1908 202 118 18 chr17 50827626 50827804 -38676749 + MLT1D LTR MaLR 10 169 -336 2065 133 0 7 chr17 50827804 50828112 -38676441 + AluSx SINE Alu 1 306 -6 1908 202 118 18 chr17 50828112 50828384 -38676169 + MLT1D LTR MaLR 169 505 0 243 150 0 0 chr17 50828384 50828424 -38676129 - MLT1F1 LTR MaLR -527 40 1 570 267 51 115 chr17 50828429 50828863 -38675690 - MLT1F1-int LTR MaLR -5 1366 961 234 343 57 29 chr17 50828983 50829158 -38675395 - MLT1F1-int LTR MaLR -491 880 701 2131 89 3 7 chr17 50829232 50829523 -38675030 - AluSx SINE Alu -22 290 1 7790 161 47 36 chr17 50829724 50830718 -38673835 + L1 LINE L1 3690 4711 -1435 2185 95 0 25 chr17 50830718 50831034 -38673519 + AluSg SINE Alu 1 308 -2 7790 161 47 36 chr17 50831034 50831690 -38672863 + L1 LINE L1 4711 5358 -788 623 138 0 0 chr17 50831693 50831780 -38672773 - FLAM SINE Alu -18 125 39 7029 121 73 9 chr17 50831881 50833013 -38671540 - Tigger2 DNA MER2_type -379 2339 1135 1471 46 0 0 chr17 50833134 50833309 -38671244 + L1PA3 LINE L1 5981 6155 0 25 0 0 0 chr17 50833387 50833412 -38671141 + AT_rich Low_complexity Low_complexity 1 25 0 1662 161 19 13 chr17 50834020 50834330 -38670223 - L1MB7 LINE L1 -13 6171 5860 2082 130 3 3 chr17 50834331 50834655 -38669898 - L1PA16 LINE L1 0 6166 5843 280 135 0 0 chr17 50834702 50834739 -38669814 - Tigger2 DNA MER2_type 0 2718 2682 1726 146 31 10 chr17 50834976 50835270 -38669283 + AluJb SINE Alu 1 300 -12 207 0 0 0 chr17 50835317 50835340 -38669213 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5673 44 28 11 chr17 50835340 50836062 -38668491 - SVA Other Other -18 1368 635 235 219 14 0 chr17 50836162 50836235 -38668318 - L1M4 LINE L1 -1328 4818 4745 288 261 15 15 chr17 50836450 50836580 -38667973 + L1MEc LINE L1 1375 1504 -4892 1547 173 37 0 chr17 50836584 50836884 -38667669 + AluJo SINE Alu 1 310 0 347 250 197 33 chr17 50837039 50837191 -38667362 + L1MEc LINE L1 1535 1711 -4685 2497 60 12 37 chr17 50837202 50837604 -38666949 + SVA Other Other 1 392 -994 1172 172 0 10 chr17 50837605 50837814 -38666739 - AluSx SINE Alu -105 207 1 649 203 7 0 chr17 50837814 50837952 -38666601 - L1MC4 LINE L1 -414 7628 7490 6429 51 28 69 chr17 50838084 50839622 -38664931 + SVA Other Other 187 1386 0 2397 264 142 31 chr17 50839639 50840967 -38663586 + L1M4 LINE L1 3280 4755 -1391 320 336 0 0 chr17 50840975 50841097 -38663456 + L1M4 LINE L1 4862 4983 -1163 676 222 18 25 chr17 50841106 50841381 -38663172 + L1MC4 LINE L1 7685 8042 0 21 0 0 0 chr17 50841408 50841429 -38663124 + GC_rich Low_complexity Low_complexity 1 21 0 2780 3 0 0 chr17 50842853 50843160 -38661393 - AluY SINE Alu -4 307 1 183 338 27 0 chr17 50844773 50844847 -38659706 + MIR3 SINE MIR 98 173 -35 323 301 39 0 chr17 50844970 50845073 -38659480 + MIR SINE MIR 86 192 -70 347 198 58 126 chr17 50845622 50845829 -38658724 - HAL1 LINE L1 -317 2190 1998 243 250 0 0 chr17 50845845 50845909 -38658644 + L1MC4 LINE L1 7979 8042 0 499 311 161 8 chr17 50846187 50846447 -38658106 - HAL1 LINE L1 -629 1878 1579 676 294 53 4 chr17 50846477 50846705 -38657848 + L1M4 LINE L1 4745 4983 -1163 612 259 9 31 chr17 50846714 50846938 -38657615 + L1MC4 LINE L1 7685 7903 -139 768 305 36 20 chr17 50847391 50847640 -38656913 + MIR SINE MIR 9 261 -1 31 26 0 0 chr17 50848340 50848378 -38656175 + AT_rich Low_complexity Low_complexity 1 38 0 1660 219 73 110 chr17 50848406 50848879 -38655674 - L1M4 LINE L1 -2500 3646 3157 269 111 0 0 chr17 50848879 50848915 -38655638 - U2 snRNA snRNA -152 36 1 1660 219 73 110 chr17 50848915 50848946 -38655607 - L1M4 LINE L1 -2989 3157 3126 1411 163 37 7 chr17 50848946 50849241 -38655312 - L1MA4 LINE L1 -1 6299 5996 1660 219 73 110 chr17 50849241 50849932 -38654621 - L1M4 LINE L1 -3020 3126 2460 945 130 0 0 chr17 50849952 50850090 -38654463 + AluJb SINE Alu 1 138 -174 2249 87 3 3 chr17 50850098 50850396 -38654157 + AluSp SINE Alu 1 298 -15 267 140 0 0 chr17 50850597 50850647 -38653906 + (CCCCAG)n Simple_repeat Simple_repeat 3 52 0 731 196 0 14 chr17 50852397 50852535 -38652018 + AluJo SINE Alu 1 136 -176 216 97 0 0 chr17 50852991 50853022 -38651531 + (GGATG)n Simple_repeat Simple_repeat 1 31 0 2051 106 40 3 chr17 50853073 50853374 -38651179 + AluSq SINE Alu 1 312 -1 270 184 299 11 chr17 50853465 50853552 -38651001 - L2 LINE L2 0 3313 3202 1532 164 116 6 chr17 50853656 50854069 -38650484 - LTR54 LTR ERV1 0 498 2 1270 178 123 0 chr17 50854431 50854723 -38649830 + MER2 DNA MER2_type 1 328 -17 264 59 0 0 chr17 50854999 50855033 -38649520 + (GGA)n Simple_repeat Simple_repeat 1 34 0 1117 253 12 0 chr17 50855068 50855325 -38649228 - MIR SINE MIR -1 261 2 345 129 113 16 chr17 50855615 50855677 -38648876 - MIR3 SINE MIR -4 204 137 407 337 60 69 chr17 50855782 50856114 -38648439 - L1MC4a LINE L1 -1753 6055 5727 239 333 13 0 chr17 50856156 50856231 -38648322 - L1MC4a LINE L1 -2187 5621 5546 233 364 97 36 chr17 50856451 50856616 -38647937 - L3 LINE CR1 -95 1482 1308 427 344 55 0 chr17 50856656 50856784 -38647769 + MIR SINE MIR 17 151 -57 236 237 105 121 chr17 50856813 50856900 -38647653 - L3b LINE CR1 -295 1288 1201 1380 188 48 7 chr17 50856900 50857207 -38647346 - AluJo SINE Alu 0 318 1 236 237 105 121 chr17 50857207 50857308 -38647245 - L3b LINE CR1 -382 1201 1102 225 314 51 8 chr17 50857639 50857757 -38646796 + MIR SINE MIR 140 262 0 2269 100 3 0 chr17 50857809 50858120 -38646433 - AluSp SINE Alu 0 313 2 588 254 49 68 chr17 50858234 50858305 -38646248 - MIR SINE MIR -13 249 178 2045 126 0 3 chr17 50858305 50858599 -38645954 + AluSx SINE Alu 3 295 -17 588 254 49 68 chr17 50858599 50858732 -38645821 - MIR SINE MIR -84 178 49 189 300 0 38 chr17 50858737 50858817 -38645736 - MIR SINE MIR -1 261 185 2239 64 6 29 chr17 50858880 50859193 -38645360 + AluSp SINE Alu 1 306 -7 1941 129 10 10 chr17 50859635 50859945 -38644608 + AluSx SINE Alu 3 312 0 356 309 135 11 chr17 50860091 50860269 -38644284 - MIR SINE MIR -5 257 58 185 345 0 17 chr17 50860494 50860552 -38644001 - MIR SINE MIR -136 72 16 810 137 0 0 chr17 50860639 50860763 -38643790 - AluSg/x SINE Alu -15 297 174 297 190 35 0 chr17 50861769 50861827 -38642726 + U13 snRNA snRNA 1 60 -44 418 287 42 0 chr17 50863754 50863908 -38640645 + MIR SINE MIR 41 200 -61 1690 151 64 0 chr17 50865170 50865267 -38639286 - L1MB3 LINE L1 -7 6176 6087 2199 83 132 15 chr17 50865267 50865593 -38638960 - THE1B LTR MaLR 0 364 1 1690 151 64 0 chr17 50865593 50865654 -38638899 - L1MB3 LINE L1 -96 6087 5693 370 274 213 10 chr17 50865654 50865851 -38638702 - L1MD3 LINE L1 -1990 6005 5769 1213 88 0 12 chr17 50866996 50867166 -38637387 - L1PA15 LINE L1 0 6165 5998 509 281 37 7 chr17 50867534 50867669 -38636884 - L2 LINE L2 0 3272 3134 708 237 72 25 chr17 50867714 50867950 -38636603 - MLT1J LTR MaLR -1 510 264 2386 87 0 3 chr17 50867972 50868284 -38636269 - AluSx SINE Alu -1 311 1 2427 116 47 133 chr17 50868556 50869029 -38635524 + Tigger2 DNA MER2_type 1 2716 -2 287 139 23 0 chr17 50869649 50869692 -38634861 - L2 LINE L2 -19 3253 3210 42 20 0 0 chr17 50869727 50869776 -38634777 + AT_rich Low_complexity Low_complexity 1 49 0 2279 103 0 0 chr17 50869852 50870154 -38634399 + AluSx SINE Alu 1 302 -10 1725 96 104 0 chr17 50870156 50870407 -38634146 + AluSg SINE Alu 3 279 -31 332 242 50 10 chr17 50871303 50871402 -38633151 + MIR3 SINE MIR 83 185 -23 1582 143 41 27 chr17 50872072 50872366 -38632187 + AluJb SINE Alu 1 298 -14 692 301 129 0 chr17 50872801 50873057 -38631496 + L3 LINE CR1 1288 1576 -1 1475 180 34 24 chr17 50873112 50873407 -38631146 - AluJb SINE Alu -14 298 1 1562 149 15 19 chr17 50873651 50873912 -38630641 - AluJo SINE Alu -52 260 1 2149 128 0 0 chr17 50874583 50874895 -38629658 - AluSx SINE Alu 0 312 1 1995 124 3 0 chr17 50875334 50875647 -38628906 + AluSx SINE Alu 1 314 0 1458 142 106 33 chr17 50875779 50876054 -38628499 - AluJo SINE Alu -17 295 1 576 267 0 0 chr17 50876054 50876189 -38628364 + MIR SINE MIR 122 256 -6 1461 198 3 25 chr17 50876291 50876609 -38627944 + AluJb SINE Alu 1 311 -1 668 271 52 14 chr17 50876703 50876913 -38627640 - MIR SINE MIR -43 219 2 289 230 115 0 chr17 50877014 50877101 -38627452 + MIR3 SINE MIR 89 185 -23 261 0 0 0 chr17 50877235 50877264 -38627289 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 6802 190 143 36 chr17 50877958 50879493 -38625060 - MER52A LTR ERV1 0 1755 56 24 0 0 0 chr17 50880377 50880401 -38624152 + AT_rich Low_complexity Low_complexity 1 24 0 315 181 138 96 chr17 50880412 50880506 -38624047 - FRAM/FAM SINE Alu -94 81 1 600 270 0 33 chr17 50880846 50880998 -38623555 + MIR SINE MIR 108 254 -8 211 159 14 58 chr17 50881327 50881396 -38623157 + GA-rich Low_complexity Low_complexity 4 69 0 450 261 61 27 chr17 50882002 50882218 -38622335 + MIR SINE MIR 23 250 -12 198 0 0 0 chr17 50882230 50882252 -38622301 + (CAT)n Simple_repeat Simple_repeat 2 23 0 207 290 48 0 chr17 50882254 50882316 -38622237 + MIR3 SINE MIR 100 164 -44 4022 91 3 21 chr17 50882774 50883144 -38621409 - L1PB3 LINE L1 -7 6147 5789 2053 115 0 0 chr17 50883144 50883439 -38621114 - AluSx SINE Alu -13 299 5 4022 91 3 21 chr17 50883439 50883638 -38620915 - L1PB3 LINE L1 -365 5789 5588 231 114 0 0 chr17 50884102 50884137 -38620416 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 570 138 23 0 chr17 50884138 50884225 -38620328 - AluJ SINE Alu -191 121 33 217 267 0 0 chr17 50884273 50884318 -38620235 - MIR SINE MIR -8 254 210 1071 207 0 5 chr17 50884319 50884522 -38620031 - AluJo SINE Alu -106 206 5 410 273 15 0 chr17 50884524 50884633 -38619920 - MIR SINE MIR -54 154 40 2241 73 0 7 chr17 50884653 50884941 -38619612 + AluSq SINE Alu 14 299 -14 230 0 0 32 chr17 50885245 50885276 -38619277 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 317 260 26 13 chr17 50885377 50885454 -38619099 - L1MEc LINE L1 -3852 2363 2286 2823 177 60 66 chr17 50885471 50886038 -38618515 - L1MD3 LINE L1 -1 7994 7314 451 232 36 9 chr17 50886038 50886150 -38618403 - MLT1F1 LTR MaLR -452 115 1 2823 177 60 66 chr17 50886150 50886385 -38618168 - L1MD3 LINE L1 -681 7314 7079 261 295 18 0 chr17 50886392 50886516 -38618037 - L1MEc LINE L1 -4104 2292 2167 4935 172 34 5 chr17 50886702 50888134 -38616419 + L1P5 LINE L1 4136 5608 -543 * 10011 191 33 12 chr17 50888132 50891497 -38613056 - L1PBa LINE L1 -1698 5164 1724 42 0 0 0 chr17 50892042 50892084 -38612469 + AT_rich Low_complexity Low_complexity 1 42 0 475 139 20 20 chr17 50892916 50893017 -38611536 + CT-rich Low_complexity Low_complexity 2 102 0 2352 96 0 3 chr17 50893948 50894251 -38610302 - AluSg SINE Alu -8 302 1 327 244 23 0 chr17 50894665 50894751 -38609802 + MER68 LTR ERV1 73 160 -402 507 363 94 33 chr17 50894854 50895345 -38609208 - L2 LINE L2 -2458 856 336 26 50 0 0 chr17 50895483 50895523 -38609030 + AT_rich Low_complexity Low_complexity 1 40 0 461 306 124 29 chr17 50895524 50895733 -38608820 - MIR SINE MIR -11 251 23 332 259 119 65 chr17 50896597 50896782 -38607771 + MIR SINE MIR 57 251 -11 241 444 0 0 chr17 50896990 50897105 -38607448 - L3 LINE CR1 -35 1542 1428 732 292 26 30 chr17 50897398 50897737 -38606816 - L1MC4a LINE L1 -1938 5853 5516 730 308 83 44 chr17 50897852 50898410 -38606143 - L1MC4a LINE L1 -2694 3435 2846 2098 87 18 0 chr17 50898410 50898713 -38605840 - AluSg SINE Alu 0 308 1 730 308 83 44 chr17 50898713 50898793 -38605760 - L1MC4a LINE L1 -3283 2846 2771 289 276 198 66 chr17 50898946 50899203 -38605350 - L3 LINE CR1 -137 1440 1150 274 188 0 0 chr17 50899697 50899745 -38604808 + Charlie5 DNA MER1_type 162 209 -2403 1979 154 3 6 chr17 50900676 50900987 -38603566 + AluSx SINE Alu 1 310 -2 966 153 32 42 chr17 50901022 50901211 -38603342 + MER20 DNA MER1_type 33 219 0 304 353 179 16 chr17 50902100 50902352 -38602201 + L2 LINE L2 2683 2975 -339 2376 148 33 25 chr17 50902369 50902762 -38601791 - MSTD LTR MaLR 0 396 1 1817 186 68 0 chr17 50902762 50903132 -38601421 - MSTD-int LTR MaLR 0 1735 1341 259 292 42 21 chr17 50903280 50903376 -38601177 + L2 LINE L2 3134 3231 -41 2054 136 3 10 chr17 50904117 50904426 -38600127 + AluSx SINE Alu 1 307 -5 585 243 36 153 chr17 50904487 50904709 -38599844 + MER91A DNA MER1_type 1 196 0 417 339 83 37 chr17 50905808 50906458 -38598095 - L1MC4a LINE L1 -5422 697 18 291 215 0 0 chr17 50906541 50906606 -38597947 + (TG)n Simple_repeat Simple_repeat 2 66 0 271 288 81 27 chr17 50906625 50906736 -38597817 + MIR SINE MIR 31 147 -115 822 51 0 0 chr17 50906739 50906837 -38597716 + AluY SINE Alu 201 298 -13 379 286 9 9 chr17 50906847 50906959 -38597594 + MIR SINE MIR 151 262 0 1105 51 0 13 chr17 50907295 50907452 -38597101 + L1PA3 LINE L1 5743 5897 -258 591 150 7 71 chr17 50907552 50907637 -38596916 - L1M4 LINE L1 -2215 3931 3857 2101 116 23 0 chr17 50907637 50907938 -38596615 - AluSx SINE Alu -4 308 1 591 150 7 71 chr17 50907938 50907992 -38596561 - L1M4 LINE L1 -2289 3857 3801 1256 255 112 22 chr17 50908014 50908212 -38596341 - HAL1 LINE L1 -336 2171 1992 2122 126 7 0 chr17 50908212 50908506 -38596047 - AluSg SINE Alu -13 297 2 1256 255 112 22 chr17 50908506 50908640 -38595913 - HAL1 LINE L1 -515 1992 1871 1858 60 0 0 chr17 50908640 50908857 -38595696 - AluSg/x SINE Alu -12 300 84 1256 255 112 22 chr17 50908857 50909103 -38595450 - HAL1 LINE L1 -636 1871 1540 1678 161 11 28 chr17 50909108 50909393 -38595160 + AluJb SINE Alu 3 282 -30 240 35 0 0 chr17 50909395 50909424 -38595129 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1873 100 0 0 chr17 50909458 50909699 -38594854 - AluSg SINE Alu -6 304 64 1700 116 0 28 chr17 50909800 50910051 -38594502 + AluSg SINE Alu 55 298 -12 837 172 0 14 chr17 50910122 50910267 -38594286 - FLAM_C SINE Alu 0 143 1 531 279 57 33 chr17 50910281 50910614 -38593939 - L1MEd LINE L1 -4862 2069 1729 216 0 0 0 chr17 50910644 50910668 -38593885 + (T)n Simple_repeat Simple_repeat 1 24 0 300 213 0 12 chr17 50910696 50910776 -38593777 - L1MEd LINE L1 -4939 1484 1406 2151 144 0 0 chr17 50910838 50911150 -38593403 - AluSx SINE Alu 0 312 1 1620 165 23 0 chr17 50911153 50911419 -38593134 - AluJb SINE Alu -18 294 23 1259 174 13 0 chr17 50911533 50911769 -38592784 - L1MB4 LINE L1 -7 6173 5935 1636 139 30 56 chr17 50911771 50911933 -38592620 + MLT1A1 LTR MaLR 1 151 -214 2551 61 0 0 chr17 50911933 50912226 -38592327 + AluSc SINE Alu 3 295 -14 1636 139 30 56 chr17 50912226 50912402 -38592151 + MLT1A1 LTR MaLR 151 330 -35 858 243 57 8 chr17 50912923 50913186 -38591367 - L1ME1 LINE L1 -9 6157 5882 438 20 0 0 chr17 50913371 50913422 -38591131 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 128 21 0 chr17 50913696 50913743 -38590810 - L1MA6 LINE L1 -64 6236 6189 1363 107 33 34 chr17 50913743 50914015 -38590538 - MER4B LTR ERV1 0 610 339 306 0 0 0 chr17 50914015 50914049 -38590504 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1363 107 33 34 chr17 50914049 50914173 -38590380 - MER4B LTR ERV1 -271 339 1 353 43 0 0 chr17 50914173 50914219 -38590334 - L1MA6 LINE L1 -108 6192 6147 1032 147 71 9 chr17 50914247 50914471 -38590082 - L1MA8 LINE L1 -4 6287 6050 2048 220 63 69 chr17 50914473 50914636 -38589917 - L1M4 LINE L1 -2391 3755 3592 2146 120 67 3 chr17 50914636 50914978 -38589575 - THE1B LTR MaLR 0 364 1 2048 220 63 69 chr17 50914978 50915759 -38588794 - L1M4 LINE L1 -2554 3592 2816 1661 183 7 13 chr17 50915759 50916060 -38588493 - AluJo SINE Alu -13 299 1 2048 220 63 69 chr17 50916060 50916184 -38588369 - L1M4 LINE L1 -3330 2816 2693 737 127 0 0 chr17 50916184 50916294 -38588259 + AluSg/x SINE Alu 187 296 -13 1209 190 15 77 chr17 50917192 50917518 -38587035 + AluJo SINE Alu 1 306 -6 1754 186 7 10 chr17 50917788 50918083 -38586470 + AluJb SINE Alu 1 294 -18 441 36 0 0 chr17 50918634 50918689 -38585864 + (TG)n Simple_repeat Simple_repeat 2 56 0 1888 153 3 17 chr17 50919592 50919892 -38584661 + AluSx SINE Alu 1 296 -16 1263 106 6 0 chr17 50919892 50920062 -38584491 + AluSg/x SINE Alu 134 304 -8 683 89 0 0 chr17 50920067 50920157 -38584396 + AluY SINE Alu 1 90 -221 1187 63 0 0 chr17 50920157 50920300 -38584253 + AluSg/x SINE Alu 154 296 -14 317 80 0 20 chr17 50920548 50920598 -38583955 + (TA)n Simple_repeat Simple_repeat 2 50 0 685 198 8 0 chr17 50920866 50920992 -38583561 + FLAM_C SINE Alu 1 127 -16 1940 154 0 13 chr17 50920996 50921294 -38583259 + AluSx SINE Alu 1 294 -18 1557 108 0 9 chr17 50921314 50921545 -38583008 + L1PB1 LINE L1 5923 6151 0 292 388 0 0 chr17 50922020 50922105 -38582448 + L2 LINE L2 3185 3269 -3 1848 169 0 17 chr17 50922245 50922547 -38582006 - AluJo SINE Alu -15 297 1 1544 180 9 38 chr17 50922562 50922878 -38581675 - AluJb SINE Alu 0 312 6 313 218 99 56 chr17 50922947 50923089 -38581464 + L1 LINE L1 4450 4597 -1549 333 307 66 12 chr17 50923168 50923412 -38581141 + L1ME LINE L1 4735 4991 -1155 249 139 0 0 chr17 50923508 50923544 -38581009 + Alu SINE Alu 1 36 -266 1540 195 7 11 chr17 50923579 50923851 -38580702 + AluJb SINE Alu 6 276 -36 454 238 81 12 chr17 50924166 50924326 -38580227 + L1MC4 LINE L1 6461 6631 -1411 1208 137 0 0 chr17 50924389 50924557 -38579996 - AluSg/x SINE Alu -11 301 134 2141 119 0 3 chr17 50924557 50924850 -38579703 - AluSg SINE Alu -18 292 1 1912 130 17 20 chr17 50924852 50925151 -38579402 - AluSx SINE Alu -14 298 1 351 0 0 0 chr17 50925222 50925261 -38579292 + (CA)n Simple_repeat Simple_repeat 2 40 0 3096 227 109 13 chr17 50925284 50926102 -38578451 + L1MC4 LINE L1 6749 7690 -352 1877 161 3 7 chr17 50926102 50926412 -38578141 + AluSx SINE Alu 1 309 -3 3096 227 109 13 chr17 50926412 50926638 -38577915 + L1MC4 LINE L1 7690 7893 -149 27 0 0 0 chr17 50926994 50927021 -38577532 + AT_rich Low_complexity Low_complexity 1 27 0 335 317 112 31 chr17 50927073 50927297 -38577256 + L1ME LINE L1 5385 5626 -495 1382 101 0 6 chr17 50927552 50927778 -38576775 + AluSg/x SINE Alu 105 329 0 1699 79 5 0 chr17 50928391 50928606 -38575947 - AluY SINE Alu -13 298 83 941 78 0 0 chr17 50929293 50929409 -38575144 - AluSp/q SINE Alu -24 289 174 2214 123 3 0 chr17 50929559 50929861 -38574692 - AluSq SINE Alu -10 303 1 265 253 119 51 chr17 50929891 50930120 -38574433 + L1MEd LINE L1 778 990 -5225 1748 171 28 0 chr17 50930120 50930407 -38574146 + AluJo SINE Alu 1 295 -17 265 253 119 51 chr17 50930407 50930773 -38573780 + L1MEd LINE L1 990 1418 -4797 375 306 86 77 chr17 50930811 50931152 -38573401 + L1MEd LINE L1 1665 2012 -4384 2063 145 0 0 chr17 50931152 50931449 -38573104 + AluSx SINE Alu 1 297 -15 375 306 86 77 chr17 50931449 50931535 -38573018 + L1MEd LINE L1 2012 2096 -4300 249 257 0 0 chr17 50931760 50931834 -38572719 + L1MEd LINE L1 2966 3039 -3176 1593 143 0 23 chr17 50931869 50932128 -38572425 + AluJb SINE Alu 60 312 0 403 261 51 85 chr17 50932136 50932458 -38572095 + L1MEd LINE L1 3031 3363 -2852 2329 84 0 3 chr17 50932458 50932755 -38571798 + AluSq SINE Alu 1 296 -17 403 261 51 85 chr17 50932755 50932835 -38571718 + L1MEd LINE L1 3363 3416 -2799 1977 124 3 3 chr17 50932835 50933145 -38571408 + AluSx SINE Alu 1 310 0 403 261 51 85 chr17 50933145 50933234 -38571319 + L1MEd LINE L1 3416 3507 -2708 1726 159 23 39 chr17 50933247 50933555 -38570998 + AluJo SINE Alu 1 303 -9 183 129 0 0 chr17 50933555 50933586 -38570967 + (GA)n Simple_repeat Simple_repeat 1 31 0 213 39 0 0 chr17 50933589 50933615 -38570938 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 2433 54 10 3 chr17 50933811 50934109 -38570444 - AluY SINE Alu -11 300 1 718 225 6 19 chr17 50934354 50934514 -38570039 + FRAM SINE Alu 2 159 -17 1386 156 184 16 chr17 50934761 50934853 -38569700 + AluSx SINE Alu 1 76 -236 1304 159 183 16 chr17 50934853 50935110 -38569443 + AluSx SINE Alu 1 300 -12 1386 156 184 16 chr17 50935110 50935273 -38569280 + AluSx SINE Alu 76 299 -13 1880 142 0 10 chr17 50935371 50935660 -38568893 + AluSx SINE Alu 1 286 -26 739 281 83 11 chr17 50935725 50936276 -38568277 + L1MEc LINE L1 1040 1630 -4766 2437 91 0 0 chr17 50937049 50937358 -38567195 - AluSx SINE Alu -3 309 1 275 338 45 26 chr17 50937495 50937877 -38566676 + L1M4 LINE L1 4794 5182 -964 316 286 58 74 chr17 50937892 50938217 -38566336 + L1M4 LINE L1 4496 4815 -1331 653 161 0 91 chr17 50938217 50938288 -38566265 + AluJo SINE Alu 7 60 -252 2084 112 38 0 chr17 50938288 50938575 -38565978 - AluSg SINE Alu -12 298 1 653 161 0 91 chr17 50938575 50938646 -38565907 + AluJo SINE Alu 60 136 -176 1596 173 0 68 chr17 50938646 50938969 -38565584 + AluJo SINE Alu 1 301 -11 2837 89 11 0 chr17 50939009 50939380 -38565173 + THE1C LTR MaLR 1 375 0 253 59 29 44 chr17 50939396 50939464 -38565089 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 301 294 132 82 chr17 50939516 50939814 -38564739 + MLT1J LTR MaLR 1 323 -188 2316 116 3 0 chr17 50939814 50940125 -38564428 + AluSx SINE Alu 1 312 0 301 294 132 82 chr17 50940125 50940204 -38564349 + MLT1J LTR MaLR 323 397 -114 237 33 0 0 chr17 50940357 50940387 -38564166 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1692 147 107 0 chr17 50940407 50940679 -38563874 + AluSx SINE Alu 1 301 -11 1286 161 14 5 chr17 50940693 50940910 -38563643 + AluJb SINE Alu 87 305 -7 248 163 20 0 chr17 50940910 50940959 -38563594 + Alu SINE Alu 86 135 -167 1477 195 10 52 chr17 50941168 50941475 -38563078 + AluJo SINE Alu 1 294 -18 2326 105 0 6 chr17 50941478 50941791 -38562762 + AluSx SINE Alu 1 311 -1 2334 81 20 0 chr17 50942392 50942689 -38561864 - AluY SINE Alu -7 304 2 2147 99 41 3 chr17 50943163 50943456 -38561097 + AluSg SINE Alu 1 304 -6 1576 164 49 7 chr17 50944245 50944531 -38560022 - AluJb SINE Alu -14 298 1 2008 67 97 0 chr17 50945538 50945805 -38558748 + AluSx SINE Alu 1 293 -19 1030 132 0 6 chr17 50945852 50946011 -38558542 + AluSc SINE Alu 135 292 -17 458 297 8 0 chr17 50946092 50946210 -38558343 - MIR SINE MIR -134 128 10 1331 183 13 73 chr17 50946571 50946735 -38557818 - L1M3 LINE L1 -425 5991 5819 1333 191 105 11 chr17 50946735 50947002 -38557551 + AluJo SINE Alu 1 292 -20 1331 183 13 73 chr17 50947002 50947118 -38557435 - L1M3 LINE L1 -597 5819 5728 2476 87 3 0 chr17 50947118 50947427 -38557126 - AluY SINE Alu -1 310 1 1331 183 13 73 chr17 50947427 50947445 -38557108 - L1M3 LINE L1 -688 5728 5710 270 0 0 0 chr17 50947456 50947486 -38557067 + (TA)n Simple_repeat Simple_repeat 2 31 0 863 145 0 0 chr17 50947487 50947604 -38556949 - FLAM_C SINE Alu -26 117 1 1934 173 42 38 chr17 50947607 50947747 -38556806 - L1M3 LINE L1 -701 5718 5580 2280 109 0 0 chr17 50947747 50948041 -38556512 - AluSx SINE Alu -18 294 1 1934 173 42 38 chr17 50948041 50948180 -38556373 - L1M3 LINE L1 -839 5580 5443 2281 104 3 0 chr17 50948180 50948479 -38556074 - AluSp SINE Alu -10 303 4 1934 173 42 38 chr17 50948479 50948814 -38555739 - L1M3 LINE L1 -976 5443 5117 679 91 0 0 chr17 50948815 50948903 -38555650 - AluS SINE Alu -216 96 9 270 230 40 0 chr17 50948967 50949041 -38555512 - L1M3 LINE L1 -4236 2148 2072 1785 159 3 28 chr17 50949314 50949603 -38554950 - AluSx SINE Alu -30 282 1 37 23 0 0 chr17 50949679 50949723 -38554830 + AT_rich Low_complexity Low_complexity 1 44 0 2317 89 7 3 chr17 50950196 50950499 -38554054 + AluSx SINE Alu 1 304 -8 1177 147 4 84 chr17 50950575 50950620 -38553933 + MER33 DNA MER1_type 9 56 -2529 1895 174 0 3 chr17 50950620 50950925 -38553628 + AluJo SINE Alu 1 304 -8 1177 147 4 84 chr17 50950925 50951130 -38553423 + MER33 DNA MER1_type 56 239 -85 381 125 0 0 chr17 50951123 50951179 -38553374 + AluSp SINE Alu 134 189 -114 * 1129 107 0 0 chr17 50951197 50951347 -38553206 + AluSq/x SINE Alu 1 150 -162 195 42 0 0 chr17 50951448 50951472 -38553081 + (CTAA)n Simple_repeat Simple_repeat 1 24 0 2190 130 0 0 chr17 50951836 50952136 -38552417 - AluSx SINE Alu -12 300 1 2432 72 7 0 chr17 50952240 50952546 -38552007 - AluY SINE Alu -3 308 1 2245 98 7 10 chr17 50952715 50953020 -38551533 - AluSc SINE Alu -5 304 1 2348 97 0 7 chr17 50953265 50953575 -38550978 - AluSp SINE Alu 0 313 6 2394 97 0 3 chr17 50953587 50953897 -38550656 - AluSq SINE Alu -4 309 1 802 165 0 0 chr17 50953938 50954065 -38550488 + FLAM_C SINE Alu 12 138 -5 27 49 0 0 chr17 50954070 50954111 -38550442 + AT_rich Low_complexity Low_complexity 1 41 0 2476 64 0 7 chr17 50954355 50954652 -38549901 + AluSc SINE Alu 1 295 -14 2267 119 0 0 chr17 50954658 50954961 -38549592 + AluSg SINE Alu 1 303 -7 306 250 0 36 chr17 50956121 50956205 -38548348 + MIR SINE MIR 30 110 -98 2211 89 25 0 chr17 50956261 50956541 -38548012 + AluSg SINE Alu 1 287 -23 2212 124 3 3 chr17 50956749 50957055 -38547498 + AluSx SINE Alu 1 306 -6 1058 105 7 0 chr17 50957293 50957445 -38547108 + L1PB3 LINE L1 6002 6154 0 1151 46 0 0 chr17 50957466 50957596 -38546957 + AluY SINE Alu 1 130 -181 1520 179 29 15 chr17 50958905 50959179 -38545374 + AluJb SINE Alu 1 278 -34 2172 97 4 4 chr17 50959672 50959951 -38544602 + AluSp SINE Alu 1 279 -34 2048 99 57 0 chr17 50960992 50961275 -38543278 + AluSx SINE Alu 2 300 -12 275 114 0 0 chr17 50962179 50962223 -38542330 + AluSp SINE Alu 256 299 -1 970 234 201 122 chr17 50962252 50962860 -38541693 - L2 LINE L2 -241 3072 2513 1673 184 10 10 chr17 50962860 50963153 -38541400 - AluJo SINE Alu -18 294 2 970 234 201 122 chr17 50963153 50963185 -38541368 - L2 LINE L2 -800 2513 2485 2271 99 7 3 chr17 50963185 50963487 -38541066 + AluSx SINE Alu 1 303 -9 970 234 201 122 chr17 50963487 50963515 -38541038 - L2 LINE L2 -828 2485 2461 677 180 8 8 chr17 50963515 50963637 -38540916 + FLAM_A SINE Alu 11 132 -10 970 234 201 122 chr17 50963637 50964345 -38540208 - L2 LINE L2 -852 2461 1452 207 337 30 30 chr17 50964419 50964520 -38540033 - MIR3 SINE MIR -54 154 54 932 207 156 75 chr17 50964598 50964970 -38539583 - L1ME2 LINE L1 -10 6154 5753 1655 136 56 83 chr17 50965037 50965397 -38539156 - L1MB7 LINE L1 -16 6168 5819 2229 88 0 27 chr17 50965397 50965692 -38538861 - AluSc SINE Alu -20 289 3 342 25 0 0 chr17 50965701 50965741 -38538812 - MLT1A1 LTR MaLR -214 151 112 362 137 68 0 chr17 50965743 50965816 -38538737 - L1MB7 LINE L1 -449 5729 5652 2491 84 3 0 chr17 50966112 50966421 -38538132 - AluSx SINE Alu -2 310 1 2191 112 3 22 chr17 50966428 50966742 -38537811 - AluSx SINE Alu -4 308 1 2470 82 0 0 chr17 50966750 50967056 -38537497 - AluSg SINE Alu -4 306 1 219 69 0 0 chr17 50967329 50967358 -38537195 + (T)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr17 50967639 50967661 -38536892 + AT_rich Low_complexity Low_complexity 1 22 0 449 104 0 15 chr17 50967916 50967983 -38536570 - AluSg/x SINE Alu -28 281 216 240 35 0 0 chr17 50968176 50968205 -38536348 + (TA)n Simple_repeat Simple_repeat 2 30 0 2053 114 7 7 chr17 50968206 50968504 -38536049 - AluSq SINE Alu -15 298 1 22 56 0 0 chr17 50968933 50968969 -38535584 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr17 50969036 50969061 -38535492 + AT_rich Low_complexity Low_complexity 1 25 0 1749 147 40 4 chr17 50969061 50969334 -38535219 - AluSg SINE Alu -27 283 1 1716 180 37 0 chr17 50969539 50969839 -38534714 - AluJo SINE Alu -1 311 1 407 224 70 17 chr17 50970403 50970566 -38533987 - MIR SINE MIR -18 244 13 2223 94 13 20 chr17 50970661 50970960 -38533593 + AluSq SINE Alu 1 297 -16 2271 172 119 98 chr17 50971098 50971336 -38533217 - Tigger7 DNA MER2_type 0 2587 2356 2194 86 18 0 chr17 50971336 50971615 -38532938 - AluY SINE Alu -16 295 12 2309 98 3 0 chr17 50971621 50971916 -38532637 - AluSp SINE Alu -17 296 1 2271 172 119 98 chr17 50971916 50971947 -38532606 - Tigger7 DNA MER2_type -235 2352 2323 1656 155 35 14 chr17 50971947 50972237 -38532316 - AluJo SINE Alu -16 296 1 2271 172 119 98 chr17 50972237 50972645 -38531908 - Tigger7 DNA MER2_type -264 2323 5 2358 99 3 0 chr17 50972922 50973224 -38531329 - AluSp SINE Alu -10 303 1 1793 116 75 51 chr17 50973560 50973653 -38530900 - AluSg SINE Alu -9 301 212 5554 51 8 11 chr17 50973653 50974319 -38530234 - SVA Other Other 0 1386 723 1793 116 75 51 chr17 50974319 50974519 -38530034 - AluSg SINE Alu -98 212 1 2179 116 3 20 chr17 50974658 50974961 -38529592 - AluSx SINE Alu -14 298 1 725 100 0 0 chr17 50974990 50975090 -38529463 + HY3 scRNA scRNA 1 100 -1 298 288 147 24 chr17 50975341 50975511 -38529042 - L1ME1 LINE L1 -20 6146 5956 904 144 40 17 chr17 50975514 50975688 -38528865 - AluSg/x SINE Alu -15 295 118 2086 127 3 3 chr17 50975706 50976006 -38528547 - AluSx SINE Alu -12 300 1 1497 85 15 0 chr17 50976016 50976216 -38528337 - AluSg/x SINE Alu -20 290 88 317 141 42 0 chr17 50976318 50976385 -38528168 - Alu SINE Alu -257 43 1 2310 97 0 19 chr17 50976388 50976699 -38527854 + AluSc SINE Alu 1 305 -4 1766 169 18 11 chr17 50976699 50976977 -38527576 - AluJo SINE Alu -31 281 1 201 141 47 31 chr17 50977029 50977093 -38527460 + T-rich Low_complexity Low_complexity 4 68 0 264 30 0 0 chr17 50977379 50977412 -38527141 + (TCTTG)n Simple_repeat Simple_repeat 3 35 0 515 164 10 67 chr17 50977419 50977523 -38527030 - FLAM_C SINE Alu -25 118 21 912 135 0 0 chr17 50978866 50978999 -38525554 + FLAM_C SINE Alu 1 133 0 343 189 28 26 chr17 50979019 50979101 -38525452 + MER21A LTR ERV1 1 83 -780 3364 161 40 54 chr17 50979201 50980133 -38524420 + MER21A LTR ERV1 73 913 -18 303 71 0 0 chr17 50980243 50980285 -38524268 + (TG)n Simple_repeat Simple_repeat 2 43 0 2291 111 0 13 chr17 50980651 50980967 -38523586 - AluSx SINE Alu 0 312 1 2360 88 0 0 chr17 50981211 50981506 -38523047 - AluY SINE Alu -16 295 1 1705 107 49 4 chr17 50981574 50981818 -38522735 - AluSx SINE Alu -16 296 42 289 152 0 0 chr17 50981918 50981964 -38522589 - AluJ/FLAM SINE Alu -219 83 38 2287 103 3 0 chr17 50982399 50982701 -38521852 - AluSp SINE Alu -10 303 1 2401 87 0 16 chr17 50982987 50983298 -38521255 + AluSp SINE Alu 1 306 -7 2403 57 0 0 chr17 50983736 50984043 -38520510 + AluY SINE Alu 1 307 0 680 255 46 19 chr17 50984095 50984260 -38520293 + MIR SINE MIR 41 215 -47 2381 92 3 16 chr17 50984260 50984577 -38519976 + AluSq SINE Alu 1 313 0 680 255 46 19 chr17 50984577 50984627 -38519926 + MIR SINE MIR 215 262 0 1117 81 0 0 chr17 50984635 50984771 -38519782 + AluSq SINE Alu 1 136 -176 279 181 0 0 chr17 50984771 50984843 -38519710 + A-rich Low_complexity Low_complexity 1 72 0 1361 96 6 0 chr17 50984843 50985021 -38519532 + AluSq SINE Alu 118 296 -17 29 20 0 39 chr17 50985057 50985079 -38519474 + AT_rich Low_complexity Low_complexity 1 22 -27 2163 117 3 0 chr17 50985079 50985370 -38519183 + AluSx SINE Alu 1 292 -20 29 20 0 39 chr17 50985370 50985398 -38519155 + AT_rich Low_complexity Low_complexity 22 49 0 1596 145 50 31 chr17 50985547 50985695 -38518858 + MER33 DNA MER1_type 1 145 -2440 2357 87 0 13 chr17 50985695 50985995 -38518558 - AluSq SINE Alu -17 296 1 1596 145 50 31 chr17 50985995 50986164 -38518389 + MER33 DNA MER1_type 145 324 0 956 146 32 25 chr17 50986302 50986460 -38518093 - AluJb SINE Alu -16 296 138 2391 88 7 0 chr17 50986466 50986762 -38517791 - AluSg SINE Alu -12 298 1 300 91 0 0 chr17 50986797 50986841 -38517712 + (TA)n Simple_repeat Simple_repeat 1 44 0 316 0 0 0 chr17 50986978 50987013 -38517540 + (TTTA)n Simple_repeat Simple_repeat 2 96 0 2249 66 0 28 chr17 50987013 50987302 -38517251 - AluSg SINE Alu -29 281 1 2715 30 0 3 chr17 50987411 50987716 -38516837 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 50988052 50988073 -38516480 + GC_rich Low_complexity Low_complexity 1 21 0 367 320 163 50 chr17 50988080 50988695 -38515858 + L1M2 LINE L1 709 1392 -5457 477 115 0 0 chr17 50988772 50988850 -38515703 + (CTGGGG)n Simple_repeat Simple_repeat 6 83 0 2308 61 19 29 chr17 50989433 50989746 -38514807 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr17 50990845 50990875 -38513678 + AT_rich Low_complexity Low_complexity 1 30 0 2204 78 42 0 chr17 50991154 50991437 -38513116 - AluYa5 SINE Alu -15 296 2 2401 86 0 10 chr17 50993445 50993758 -38510795 - AluSg SINE Alu 0 310 1 454 236 132 81 chr17 50994223 50994348 -38510205 + MER102b DNA MER1_type 38 155 -1273 2605 52 3 0 chr17 50994348 50994654 -38509899 + AluSp SINE Alu 1 307 -6 454 236 132 81 chr17 50994654 50994786 -38509767 + MER102b DNA MER1_type 155 308 -33 2288 93 0 29 chr17 50994940 50995253 -38509300 + AluSg SINE Alu 1 304 -6 336 259 75 84 chr17 50995316 50995397 -38509156 + L1ME LINE L1 5377 5457 -705 2071 112 6 42 chr17 50995397 50995710 -38508843 - AluSq SINE Alu -11 302 1 336 259 75 84 chr17 50995710 50995951 -38508602 + L1ME LINE L1 5457 5697 -465 2372 64 0 0 chr17 50995954 50996277 -38508276 - AluY SINE Alu 0 323 1 815 155 0 49 chr17 50996278 50996420 -38508133 - AluSq/x SINE Alu -177 136 2 877 213 0 0 chr17 50996586 50996785 -38507768 - AluSc SINE Alu 0 329 131 1974 139 30 0 chr17 50996785 50997088 -38507465 - AluSx SINE Alu 0 312 1 1524 176 52 38 chr17 50997090 50997380 -38507173 - AluJo SINE Alu -18 294 1 1816 157 7 14 chr17 50997643 50997930 -38506623 - AluJb SINE Alu -27 285 1 279 0 0 0 chr17 50998127 50998158 -38506395 + (TG)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr17 50998157 50998177 -38506376 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1671 150 24 17 chr17 50998228 50998521 -38506032 + AluJb SINE Alu 1 295 -17 1634 175 3 20 chr17 50998663 50998966 -38505587 + AluSx SINE Alu 1 298 -14 348 286 143 14 chr17 50999015 50999155 -38505398 + MIR3 SINE MIR 34 191 -17 2883 156 104 18 chr17 50999403 51000019 -38504534 - L1MB8 LINE L1 -5 6173 5505 2287 105 0 22 chr17 51000028 51000341 -38504212 - AluSx SINE Alu -6 306 1 2310 95 3 0 chr17 51000530 51000825 -38503728 - AluSp SINE Alu -17 296 1 1813 161 3 7 chr17 51001604 51001903 -38502650 + AluSx SINE Alu 1 298 -14 358 258 58 25 chr17 51002124 51002244 -38502309 + L1ME4a LINE L1 5294 5417 -2391 828 286 50 8 chr17 51002303 51002660 -38501893 + L1ME4a LINE L1 5534 5905 -216 310 206 82 41 chr17 51002698 51002795 -38501758 + L1ME4a LINE L1 5999 6099 -22 30 27 0 0 chr17 51002796 51002833 -38501720 + AT_rich Low_complexity Low_complexity 1 37 0 2437 53 0 0 chr17 51002902 51003209 -38501344 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 51003318 51003346 -38501207 + AT_rich Low_complexity Low_complexity 1 28 0 988 141 0 0 chr17 51003598 51003740 -38500813 + FLAM_C SINE Alu 1 142 -1 298 294 0 0 chr17 51003741 51003826 -38500727 - MLT1I LTR MaLR -245 164 80 1039 238 93 84 chr17 51003836 51004240 -38500313 + HAL1 LINE L1 853 1252 -1255 2040 153 0 0 chr17 51004240 51004541 -38500012 - AluSx SINE Alu -11 301 1 1039 238 93 84 chr17 51004541 51004943 -38499610 + HAL1 LINE L1 1252 1666 -841 842 203 28 0 chr17 51005026 51005203 -38499350 + AluJo SINE Alu 121 302 -10 330 188 104 14 chr17 51005416 51005560 -38498993 + L1M4 LINE L1 2809 2965 -3181 925 248 16 66 chr17 51005995 51006068 -38498485 - MIR SINE MIR -32 230 155 1501 187 10 60 chr17 51006068 51006368 -38498185 - AluJo SINE Alu -22 290 6 925 248 16 66 chr17 51006368 51006536 -38498017 - MIR SINE MIR -107 155 1 260 273 18 27 chr17 51006731 51006841 -38497712 - L1MC4a LINE L1 -1884 5924 5816 2348 63 0 14 chr17 51007046 51007369 -38497184 - AluY SINE Alu 0 323 5 1390 125 10 10 chr17 51007773 51007973 -38496580 + AluSg/x SINE Alu 95 294 -16 21 0 0 0 chr17 51008052 51008073 -38496480 + AT_rich Low_complexity Low_complexity 1 21 0 30 77 0 0 chr17 51008887 51008952 -38495601 + AT_rich Low_complexity Low_complexity 1 65 0 344 233 52 9 chr17 51009267 51009383 -38495170 + MARNA DNA Mariner 269 389 -197 2126 126 13 0 chr17 51009389 51009691 -38494862 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr17 51009977 51010012 -38494541 + AT_rich Low_complexity Low_complexity 1 35 0 549 244 153 34 chr17 51010363 51010572 -38493981 + MIR SINE MIR 23 256 -6 306 0 0 0 chr17 51011396 51011430 -38493123 + (TG)n Simple_repeat Simple_repeat 2 35 0 183 156 0 0 chr17 51011430 51011462 -38493091 + (CATATA)n Simple_repeat Simple_repeat 4 35 0 306 277 40 10 chr17 51011872 51011973 -38492580 - HAL1b LINE L1 -739 609 506 1797 241 39 12 chr17 51011997 51012507 -38492046 + MER90 LTR ERV1 9 532 -43 340 302 50 96 chr17 51012528 51012829 -38491724 - HAL1b LINE L1 -854 494 208 231 36 0 0 chr17 51013149 51013177 -38491376 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2184 90 4 0 chr17 51013183 51013460 -38491093 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 51013784 51013814 -38490739 + AT_rich Low_complexity Low_complexity 1 30 0 187 250 103 0 chr17 51014376 51014444 -38490109 + MIR SINE MIR 182 256 -6 887 143 0 0 chr17 51014480 51014613 -38489940 - FLAM_C SINE Alu 0 133 1 2000 172 0 0 chr17 51014768 51015070 -38489483 + AluSx SINE Alu 1 302 -10 1738 191 0 30 chr17 51015098 51015402 -38489151 + AluJo SINE Alu 1 295 -17 2254 123 0 0 chr17 51015404 51015705 -38488848 + AluSx SINE Alu 1 301 -11 2264 99 0 0 chr17 51016578 51016872 -38487681 - AluY SINE Alu -17 294 1 189 0 0 0 chr17 51018060 51018081 -38486472 + (TA)n Simple_repeat Simple_repeat 2 22 0 2215 103 3 10 chr17 51020025 51020327 -38484226 + AluSq SINE Alu 1 300 -13 1389 183 3 106 chr17 51020670 51020992 -38483561 - AluSg1 SINE Alu -20 289 1 1609 186 3 35 chr17 51021025 51021310 -38483243 - AluJb SINE Alu -36 276 1 830 156 0 7 chr17 51021806 51021941 -38482612 + FRAM SINE Alu 12 145 -31 1249 145 0 0 chr17 51021989 51022161 -38482392 + AluSx SINE Alu 3 174 -138 328 130 0 0 chr17 51022167 51022221 -38482332 + AluSc SINE Alu 245 298 -1 2334 87 10 7 chr17 51022835 51023135 -38481418 + AluSp SINE Alu 1 301 -12 1353 117 0 113 chr17 51024429 51024502 -38480051 + MER46A DNA MER2_type 1 81 -2650 1694 57 26 18 chr17 51024502 51024729 -38479824 - L1PA6 LINE L1 0 6154 5926 1353 117 0 113 chr17 51024729 51024921 -38479632 + MER46A DNA MER2_type 81 236 0 1935 138 17 10 chr17 51025025 51025323 -38479230 + AluJo SINE Alu 1 300 -12 1582 136 14 31 chr17 51025330 51025617 -38478936 - Tigger3(Golem) DNA MER2_type 0 3029 2748 1126 169 0 11 chr17 51025628 51025811 -38478742 + AluJo SINE Alu 13 193 -119 1041 91 28 6 chr17 51025917 51026093 -38478460 - Tigger3(Golem) DNA MER2_type -359 2670 2491 2344 82 0 52 chr17 51026093 51026283 -38478270 - AluSp SINE Alu 0 313 115 501 32 0 0 chr17 51026283 51026346 -38478207 + (TTATG)n Simple_repeat Simple_repeat 2 64 0 2431 45 0 0 chr17 51026346 51026632 -38477921 - AluY SINE Alu -25 286 1 2217 111 0 3 chr17 51026634 51026931 -38477622 - AluSx SINE Alu -16 296 1 2344 82 0 52 chr17 51026931 51027066 -38477487 - AluSp SINE Alu -198 115 1 1860 160 0 17 chr17 51027261 51027401 -38477152 + AluJb SINE Alu 1 142 -170 2342 111 3 0 chr17 51027401 51027707 -38476846 + AluSx SINE Alu 1 307 -5 1860 160 0 17 chr17 51027707 51027859 -38476694 + AluJb SINE Alu 142 288 -24 407 226 6 77 chr17 51028411 51028466 -38476087 + L1M4 LINE L1 3796 3853 -2293 2251 121 0 0 chr17 51028466 51028763 -38475790 + AluSx SINE Alu 1 297 -15 407 226 6 77 chr17 51028763 51028875 -38475678 + L1M4 LINE L1 3853 3951 -2195 29 28 0 0 chr17 51029214 51029250 -38475303 + AT_rich Low_complexity Low_complexity 1 36 0 675 160 0 25 chr17 51029250 51029369 -38475184 - FLAM_C SINE Alu -17 116 1 1719 164 7 10 chr17 51029893 51030186 -38474367 + AluJo SINE Alu 1 292 -20 626 185 109 0 chr17 51030191 51030310 -38474243 + FLAM_C SINE Alu 1 132 -1 812 159 0 36 chr17 51030567 51030705 -38473848 + FLAM_C SINE Alu 1 133 0 2171 108 10 7 chr17 51031521 51031818 -38472735 - AluSg SINE Alu -12 298 1 1679 173 3 11 chr17 51031852 51032135 -38472418 + AluJb SINE Alu 1 281 -31 1924 132 7 46 chr17 51032641 51032945 -38471608 + AluSx SINE Alu 1 292 -20 2026 96 0 19 chr17 51034087 51034357 -38470196 + AluSg SINE Alu 35 299 -11 671 206 16 0 chr17 51034379 51034505 -38470048 - FLAM_A SINE Alu -5 128 1 26 0 0 0 chr17 51034515 51034541 -38470012 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr17 51034704 51034740 -38469813 + AT_rich Low_complexity Low_complexity 1 36 0 2029 110 27 7 chr17 51034837 51035129 -38469424 + AluSx SINE Alu 2 299 -13 2012 96 4 0 chr17 51037579 51037839 -38466714 - AluSp SINE Alu -14 299 39 1862 96 59 0 chr17 51038159 51038431 -38466122 - AluSq SINE Alu -14 299 12 1162 80 0 31 chr17 51038585 51038748 -38465805 + AluSg/x SINE Alu 155 312 0 882 139 0 7 chr17 51038758 51038895 -38465658 + AluSq/x SINE Alu 1 136 -177 2094 108 3 13 chr17 51038895 51039202 -38465351 + AluSx SINE Alu 1 304 -8 1913 137 0 7 chr17 51039203 51039496 -38465057 + AluSg SINE Alu 1 291 -19 2014 95 7 11 chr17 51039501 51039829 -38464724 + AluSx SINE Alu 1 327 0 2060 115 3 10 chr17 51039832 51040137 -38464416 + AluSc SINE Alu 1 303 -6 30 45 0 0 chr17 51040221 51040265 -38464288 + AT_rich Low_complexity Low_complexity 1 44 0 2169 78 14 3 chr17 51040389 51040683 -38463870 - AluSp SINE Alu -16 297 1 230 281 78 135 chr17 51040812 51041004 -38463549 + MIR SINE MIR 64 244 -18 322 260 27 113 chr17 51041940 51042090 -38462463 - MIR3 SINE MIR -64 144 8 1777 149 36 0 chr17 51042464 51042745 -38461808 + AluSq SINE Alu 1 291 -22 2169 97 0 0 chr17 51042757 51043055 -38461498 + AluSx SINE Alu 1 298 -14 1883 100 6 84 chr17 51043568 51043888 -38460665 - AluSx SINE Alu -17 295 1 710 189 15 8 chr17 51043910 51044042 -38460511 - FLAM_A SINE Alu 0 133 1 1245 139 14 28 chr17 51044056 51044272 -38460281 - AluJb SINE Alu -12 300 88 358 197 156 8 chr17 51044507 51044629 -38459924 - MER112 DNA MER1_type -2 258 119 29 60 0 0 chr17 51044631 51044681 -38459872 + AT_rich Low_complexity Low_complexity 1 50 0 318 299 61 27 chr17 51044722 51044869 -38459684 - L2 LINE L2 -2 3311 3160 2057 109 3 3 chr17 51045032 51045325 -38459228 + AluSc SINE Alu 1 293 -16 30 0 0 0 chr17 51045325 51045355 -38459198 + AT_rich Low_complexity Low_complexity 1 30 0 2248 97 0 0 chr17 51045357 51045665 -38458888 + AluSc SINE Alu 1 308 -1 767 316 111 13 chr17 51045828 51046062 -38458491 - L3 LINE CR1 -53 1524 1314 373 184 26 0 chr17 51046062 51046138 -38458415 - MER116 DNA Mariner 0 80 3 767 316 111 13 chr17 51046138 51046289 -38458264 - L3 LINE CR1 -263 1314 1101 1743 114 50 0 chr17 51046423 51046685 -38457868 - AluSx SINE Alu -37 275 1 649 193 0 86 chr17 51046710 51046850 -38457703 + FLAM_A SINE Alu 1 128 -5 32 75 0 0 chr17 51047100 51047167 -38457386 + AT_rich Low_complexity Low_complexity 1 67 0 459 267 210 57 chr17 51047460 51047692 -38456861 - L2 LINE L2 0 3313 3118 2182 100 10 3 chr17 51047692 51047991 -38456562 + AluSc SINE Alu 1 301 -8 459 267 210 57 chr17 51047991 51048009 -38456544 - L2 LINE L2 -195 3118 3104 1939 135 0 0 chr17 51048009 51048297 -38456256 + AluJb SINE Alu 9 296 -16 459 267 210 57 chr17 51048297 51048416 -38456137 - L2 LINE L2 -209 3104 2886 832 164 80 69 chr17 51048417 51048458 -38456095 - L1ME LINE L1 -618 5544 5505 1480 194 53 0 chr17 51048458 51048742 -38455811 - AluJb SINE Alu -13 299 1 832 164 80 69 chr17 51048742 51048962 -38455591 - L1ME LINE L1 -657 5505 5280 973 73 15 0 chr17 51048962 51049099 -38455454 - AluSc SINE Alu -8 301 163 1776 87 0 0 chr17 51049202 51049443 -38455110 - AluY SINE Alu -70 241 1 1481 191 3 14 chr17 51049444 51049726 -38454827 - AluJb SINE Alu -33 279 1 607 246 4 127 chr17 51049728 51049798 -38454755 - MIR SINE MIR -51 211 134 2161 91 0 23 chr17 51049798 51050106 -38454447 - AluSq SINE Alu -12 301 1 607 246 4 127 chr17 51050106 51050263 -38454290 - MIR SINE MIR -128 134 12 2303 87 3 3 chr17 51050315 51050624 -38453929 + AluSx SINE Alu 2 310 -2 280 260 55 0 chr17 51051012 51051085 -38453468 - L2 LINE L2 -5 3308 3232 549 0 0 0 chr17 51051439 51051500 -38453053 + (TG)n Simple_repeat Simple_repeat 2 62 0 2217 110 3 0 chr17 51051678 51051979 -38452574 - AluSx SINE Alu -10 302 1 1943 110 7 7 chr17 51052252 51052542 -38452011 + AluSg SINE Alu 1 290 -20 624 250 0 0 chr17 51052733 51052865 -38451688 - FLAM_C SINE Alu -10 133 2 311 239 15 8 chr17 51052955 51053056 -38451497 - MIR3 SINE MIR -1 207 106 735 147 17 0 chr17 51053452 51053568 -38450985 + FLAM_A SINE Alu 12 129 -13 1976 89 0 86 chr17 51053675 51053990 -38450563 - AluSg SINE Alu -22 288 1 2054 99 0 48 chr17 51053997 51054165 -38450388 - AluSx SINE Alu -11 301 153 2231 81 10 0 chr17 51054165 51054462 -38450091 - AluY SINE Alu -11 300 1 2054 99 0 48 chr17 51054462 51054606 -38449947 - AluSx SINE Alu -159 153 4 2134 88 0 50 chr17 51055195 51055340 -38449213 + AluSx SINE Alu 3 154 -158 1791 94 0 114 chr17 51055340 51055681 -38448872 + AluY SINE Alu 1 302 -9 2134 88 0 50 chr17 51055681 51055854 -38448699 + AluSx SINE Alu 154 305 -7 1203 103 0 0 chr17 51055854 51056019 -38448534 + AluSq SINE Alu 135 299 -14 350 146 0 0 chr17 51056040 51056095 -38448458 + MER53 DNA DNA 1 55 -134 1569 177 3 50 chr17 51056096 51056243 -38448310 + AluJb SINE Alu 1 153 -159 1983 150 3 0 chr17 51056243 51056550 -38448003 + AluSx SINE Alu 1 308 -4 1569 177 3 50 chr17 51056550 51056724 -38447829 + AluJb SINE Alu 153 307 -5 885 62 0 9 chr17 51056724 51056836 -38447717 + AluY SINE Alu 22 132 -179 2010 68 4 23 chr17 51056857 51057122 -38447431 + AluSp SINE Alu 30 289 -24 962 193 47 19 chr17 51057247 51057459 -38447094 - AluJb SINE Alu -8 304 87 867 157 186 68 chr17 51057480 51057728 -38446825 - AluJb SINE Alu -33 279 3 2062 116 0 17 chr17 51057743 51058045 -38446508 - AluSq SINE Alu -16 297 1 198 0 0 0 chr17 51059580 51059602 -38444951 + (T)n Simple_repeat Simple_repeat 1 22 0 1299 196 0 0 chr17 51059724 51059953 -38444600 - AluJo SINE Alu -83 229 1 1632 126 35 0 chr17 51059954 51060215 -38444338 - L1M4 LINE L1 -571 5613 5344 2139 105 3 0 chr17 51060844 51061140 -38443413 - AluSx SINE Alu -12 300 4 2283 94 0 3 chr17 51061438 51061747 -38442806 - AluSx SINE Alu -4 308 1 1729 159 28 3 chr17 51062160 51062449 -38442104 - AluJb SINE Alu -16 296 1 219 69 0 0 chr17 51063246 51063275 -38441278 + (T)n Simple_repeat Simple_repeat 1 29 0 268 94 0 94 chr17 51063375 51063428 -38441125 + Alu SINE Alu 250 297 -5 927 203 12 0 chr17 51063934 51064097 -38440456 - MIR3 SINE MIR -16 192 28 872 105 63 28 chr17 51064127 51064254 -38440299 + AluJb SINE Alu 1 135 -177 2223 95 0 7 chr17 51064254 51064560 -38439993 + AluSg SINE Alu 1 304 -6 872 105 63 28 chr17 51064560 51064575 -38439978 + AluJb SINE Alu 135 148 -164 524 146 0 0 chr17 51064575 51064657 -38439896 + AluS SINE Alu 221 302 -10 248 86 0 0 chr17 51064657 51064692 -38439861 + Alu SINE Alu 85 119 -183 24 53 0 0 chr17 51064692 51064730 -38439823 + AT_rich Low_complexity Low_complexity 1 38 0 613 201 174 34 chr17 51065220 51065369 -38439184 - AluSg/x SINE Alu -22 288 119 222 37 0 0 chr17 51065562 51065589 -38438964 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1862 122 7 0 chr17 51065838 51066116 -38438437 - AluSx SINE Alu -32 280 1 342 132 19 0 chr17 51066128 51066181 -38438372 - Alu SINE Alu -7 294 241 207 0 0 0 chr17 51066181 51066204 -38438349 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 273 151 113 0 chr17 51066204 51066244 -38438309 - AluS SINE Alu -21 281 232 1860 116 7 17 chr17 51066244 51066537 -38438016 - AluSx SINE Alu -22 290 1 273 151 113 0 chr17 51066537 51066549 -38438004 - AluS SINE Alu -70 232 223 1998 89 26 40 chr17 51066948 51067252 -38437301 - AluSx SINE Alu -12 300 1 619 106 125 29 chr17 51067292 51067396 -38437157 - FLAM_C SINE Alu -18 125 12 2131 71 7 3 chr17 51067410 51067705 -38436848 - AluSc SINE Alu -13 296 1 299 174 120 65 chr17 51068018 51068110 -38436443 + MIR SINE MIR 26 122 -86 * 439 205 11 67 chr17 51068090 51068240 -38436313 + MIR3 SINE MIR 39 182 -26 189 74 0 0 chr17 51068763 51068790 -38435763 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 238 196 0 18 chr17 51068984 51069040 -38435513 + C-rich Low_complexity Low_complexity 1 55 0 182 204 0 0 chr17 51069403 51069447 -38435106 + C-rich Low_complexity Low_complexity 1 44 0 219 139 0 0 chr17 51069893 51069929 -38434624 + (T)n Simple_repeat Simple_repeat 1 36 0 186 333 83 42 chr17 51072049 51072136 -38432417 - MER5A DNA MER1_type -22 167 72 1719 93 122 7 chr17 51072136 51072406 -38432147 - AluSg1 SINE Alu -8 301 1 186 333 83 42 chr17 51072406 51072438 -38432115 - MER5A DNA MER1_type -117 72 43 2124 121 3 0 chr17 51072997 51073302 -38431251 + AluSx SINE Alu 1 306 -6 1712 129 42 52 chr17 51073460 51073770 -38430783 + AluJb SINE Alu 1 307 -5 2223 86 0 7 chr17 51073771 51074072 -38430481 + AluSp SINE Alu 1 299 -14 617 190 26 123 chr17 51074188 51074383 -38430170 + MER20 DNA MER1_type 3 178 -41 1417 168 56 4 chr17 51074387 51074655 -38429898 + AluSx SINE Alu 1 282 -30 1635 173 0 7 chr17 51075135 51075441 -38429112 + AluJb SINE Alu 1 304 0 1259 155 171 0 chr17 51075654 51075899 -38428654 + AluJb SINE Alu 3 289 -13 486 100 0 0 chr17 51076106 51076176 -38428377 + Alu SINE Alu 236 305 -7 429 317 150 30 chr17 51076217 51076583 -38427970 + L2 LINE L2 2566 2975 -339 30 0 0 0 chr17 51076787 51076817 -38427736 + AT_rich Low_complexity Low_complexity 1 30 0 1979 128 7 0 chr17 51076826 51077123 -38427430 - AluSx SINE Alu -13 299 1 390 248 191 24 chr17 51077130 51077310 -38427243 - MIR SINE MIR -60 202 1 632 102 82 0 chr17 51077466 51077564 -38426989 - FRAM SINE Alu -33 143 38 1221 108 17 0 chr17 51077603 51077779 -38426774 + AluSq SINE Alu 1 179 -134 1074 200 0 14 chr17 51077951 51078161 -38426392 + AluJb SINE Alu 87 293 -19 657 364 56 25 chr17 51079555 51079879 -38424674 - L2 LINE L2 -48 3224 2891 2265 85 0 7 chr17 51079884 51080189 -38424364 + AluSq SINE Alu 1 303 -10 1662 147 20 10 chr17 51080198 51080491 -38424062 + AluJo SINE Alu 1 296 -16 2142 112 0 0 chr17 51080501 51080796 -38423757 + AluSc SINE Alu 1 295 -14 1772 119 77 11 chr17 51080824 51081110 -38423443 + AluSx SINE Alu 6 310 -2 748 189 8 0 chr17 51081240 51081372 -38423181 + AluJo SINE Alu 2 134 -178 294 200 50 25 chr17 51081412 51081492 -38423061 + MIR SINE MIR 125 206 -56 2076 95 14 0 chr17 51081869 51082164 -38422389 - AluY SINE Alu -12 299 1 1607 106 9 0 chr17 51082204 51082431 -38422122 - AluSg/x SINE Alu -1 309 81 22 35 0 0 chr17 51082952 51082981 -38421572 + AT_rich Low_complexity Low_complexity 1 29 0 312 200 0 0 chr17 51083040 51083105 -38421448 + Charlie8 DNA MER1_type 86 150 -2267 899 161 10 78 chr17 51083112 51083317 -38421236 + AluJo SINE Alu 7 197 -115 2196 82 20 23 chr17 51083579 51083883 -38420670 - AluSx SINE Alu -9 303 1 205 100 150 0 chr17 51084362 51084402 -38420151 + L2 LINE L2 3178 3223 -90 2204 98 0 0 chr17 51084974 51085269 -38419284 + AluSp SINE Alu 1 295 -18 614 285 65 67 chr17 51085609 51085653 -38418900 - L2 LINE L2 -501 2813 2770 2001 98 66 3 chr17 51085653 51085939 -38418614 + AluSx SINE Alu 1 304 -8 614 285 65 67 chr17 51085939 51086266 -38418287 - L2 LINE L2 -544 2770 2443 1594 194 7 0 chr17 51086624 51086903 -38417650 + AluJb SINE Alu 22 302 -10 469 282 168 27 chr17 51086991 51087211 -38417342 - MIR SINE MIR -6 256 6 301 233 121 17 chr17 51087781 51087897 -38416656 + L1MDb LINE L1 1101 1228 -5181 22 0 0 0 chr17 51088920 51088942 -38415611 + AT_rich Low_complexity Low_complexity 1 22 0 857 274 155 53 chr17 51089469 51089798 -38414755 + LTR33 LTR ERVL 1 295 -226 2451 84 0 0 chr17 51089798 51090097 -38414456 + AluSq SINE Alu 1 299 -14 2216 127 7 3 chr17 51090103 51090410 -38414143 + AluSx SINE Alu 1 308 -4 857 274 155 53 chr17 51090410 51090543 -38414010 + LTR33 LTR ERVL 299 518 -3 2048 123 25 3 chr17 51091216 51091501 -38413052 + AluSx SINE Alu 1 291 -21 2248 72 3 40 chr17 51091522 51091826 -38412727 + AluSp SINE Alu 1 293 -20 2188 113 10 0 chr17 51092693 51092986 -38411567 + AluJb SINE Alu 1 296 -16 1418 154 138 0 chr17 51093000 51093247 -38411306 + AluJb SINE Alu 4 284 -18 1864 137 10 23 chr17 51093253 51093552 -38411001 + AluJo SINE Alu 1 295 -17 1377 92 0 0 chr17 51093717 51093891 -38410662 - AluSq SINE Alu -66 247 74 2215 122 0 0 chr17 51093910 51094204 -38410349 - AluSx SINE Alu -18 294 1 868 194 24 6 chr17 51094204 51094369 -38410184 - AluJb SINE Alu -16 296 129 343 219 55 0 chr17 51094475 51094548 -38410005 + MLT1J LTR MaLR 248 324 -187 2295 232 124 62 chr17 51094581 51095073 -38409480 - HAL1 LINE L1 -368 2139 1679 1510 157 66 21 chr17 51095073 51095360 -38409193 - AluJb SINE Alu -12 300 1 2295 232 124 62 chr17 51095360 51095724 -38408829 - HAL1 LINE L1 -828 1679 1339 2252 112 0 0 chr17 51095724 51096018 -38408535 - AluSg SINE Alu -16 294 1 2295 232 124 62 chr17 51096018 51096288 -38408265 - HAL1 LINE L1 -1168 1339 942 975 153 0 0 chr17 51096303 51096447 -38408106 - AluSx SINE Alu -140 172 29 1472 70 11 0 chr17 51096548 51096733 -38407820 + AluY SINE Alu 111 297 -14 2697 206 50 30 chr17 51096733 51096998 -38407555 + L1ME1 LINE L1 5389 5647 -519 1724 122 118 15 chr17 51096998 51097268 -38407285 + AluSx SINE Alu 1 298 -14 2697 206 50 30 chr17 51097268 51097540 -38407013 + L1ME1 LINE L1 5647 5945 -221 1946 167 7 3 chr17 51097540 51097845 -38406708 + AluJb SINE Alu 1 306 -6 2697 206 50 30 chr17 51097845 51097979 -38406574 + L1ME1 LINE L1 5945 6075 -91 278 93 0 107 chr17 51098032 51098107 -38406446 + L1ME1 LINE L1 5417 5483 -679 1493 179 84 0 chr17 51098113 51098376 -38406177 + AluJb SINE Alu 1 285 -27 1421 256 94 5 chr17 51098376 51098801 -38405752 + L1ME1 LINE L1 5560 6022 -144 865 246 56 26 chr17 51098806 51099001 -38405552 + MER63A DNA MER1_type 8 208 -2 583 212 12 6 chr17 51099016 51099159 -38405394 + L1ME2 LINE L1 6042 6334 0 317 281 72 7 chr17 51099157 51099296 -38405257 + L1ME4a LINE L1 5725 5872 -249 * 2320 110 7 0 chr17 51099327 51099637 -38404916 - AluSp SINE Alu -1 312 1 395 177 23 108 chr17 51099751 51099881 -38404672 + MIR SINE MIR 2 120 -142 2199 122 3 0 chr17 51150462 51150774 -38353779 + AluSq SINE Alu 1 313 0 453 257 35 0 chr17 51151339 51151452 -38353101 - MIR3 SINE MIR -6 202 86 2314 109 3 3 chr17 51153258 51153571 -38350982 - AluSq SINE Alu 0 313 1 278 245 94 40 chr17 51153810 51153970 -38350583 - MIR SINE MIR -65 143 1 330 289 207 0 chr17 51154028 51154163 -38350390 - MIR3 SINE MIR -17 191 29 2138 92 0 7 chr17 51154771 51155081 -38349472 + AluSx SINE Alu 1 308 0 704 256 101 0 chr17 51155928 51156135 -38348418 - MIR SINE MIR -3 259 32 290 347 9 10 chr17 51156404 51156507 -38348046 - MIR SINE MIR -85 123 13 234 91 0 0 chr17 51157669 51157702 -38346851 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 351 121 0 0 chr17 51159206 51159264 -38345289 + (CA)n Simple_repeat Simple_repeat 1 58 0 411 21 0 0 chr17 51159567 51159615 -38344938 + (CA)n Simple_repeat Simple_repeat 2 49 0 245 256 37 37 chr17 51163412 51163494 -38341059 + G-rich Low_complexity Low_complexity 3 84 0 378 264 71 91 chr17 51166106 51166331 -38338222 + L1MC5 LINE L1 7514 7742 -219 1659 88 0 5 chr17 51166331 51166547 -38338006 - AluSq SINE Alu -31 282 68 1888 163 0 3 chr17 51166550 51166838 -38337715 - AluSx SINE Alu -25 287 1 378 264 71 91 chr17 51166838 51166904 -38337649 + L1MC5 LINE L1 7744 7803 -158 210 323 65 0 chr17 51166914 51167007 -38337546 + MIR SINE MIR 94 192 -70 218 306 111 14 chr17 51167201 51167345 -38337208 + L2 LINE L2 3003 3160 -153 2136 112 0 0 chr17 51167352 51167647 -38336906 - AluSx SINE Alu -17 295 1 282 322 59 26 chr17 51168664 51168816 -38335737 - L2 LINE L2 -1 3312 3156 2094 103 11 0 chr17 51168840 51169149 -38335404 + AluSq SINE Alu 1 312 0 483 298 77 0 chr17 51169664 51169832 -38334721 + MIR SINE MIR 56 236 -26 1815 142 44 24 chr17 51169878 51170174 -38334379 - AluSx SINE Alu -10 302 1 1109 301 83 2 chr17 51170308 51170756 -38333797 + MLT1L LTR MaLR 126 609 -6 201 138 0 0 chr17 51170864 51170893 -38333660 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2112 90 0 59 chr17 51170903 51171225 -38333328 - AluY SINE Alu -8 303 1 561 153 134 19 chr17 51171367 51171508 -38333045 + L1MB7 LINE L1 6010 6172 -12 2036 119 3 7 chr17 51171508 51171802 -38332751 - AluSq SINE Alu -20 293 1 561 153 134 19 chr17 51171802 51171817 -38332736 + L1MB7 LINE L1 6172 6184 0 420 289 92 37 chr17 51172125 51172361 -38332192 + MIR SINE MIR 9 261 -1 1586 178 34 14 chr17 51172586 51172879 -38331674 - AluJb SINE Alu -13 299 1 775 232 38 40 chr17 51173101 51173483 -38331070 - MER113 DNA MER1_type? -75 446 1 381 269 9 19 chr17 51174039 51174147 -38330406 + MIR SINE MIR 23 129 -79 1822 167 3 0 chr17 51176259 51176547 -38328006 + AluJo SINE Alu 13 301 -11 1163 189 0 18 chr17 51177319 51177541 -38327012 - AluJo SINE Alu -3 309 92 2377 83 0 0 chr17 51177542 51177844 -38326709 - AluY SINE Alu -9 302 1 184 156 22 0 chr17 51177885 51177930 -38326623 + L2 LINE L2 3014 3059 -213 360 0 0 0 chr17 51178429 51178469 -38326084 + (TG)n Simple_repeat Simple_repeat 2 41 0 2374 85 0 0 chr17 51179268 51179574 -38324979 - AluSg SINE Alu -4 306 1 615 344 5 27 chr17 51179761 51179982 -38324571 - MIR SINE MIR -16 246 31 559 265 72 55 chr17 51180120 51180301 -38324252 + MER91B DNA MER1_type 1 184 -6 2041 138 0 0 chr17 51180678 51180968 -38323585 + AluJb SINE Alu 1 290 -22 37 0 0 0 chr17 51180968 51181005 -38323548 + AT_rich Low_complexity Low_complexity 1 37 0 2272 91 0 19 chr17 51181193 51181511 -38323042 - AluSx SINE Alu 0 312 1 6206 53 22 5 chr17 51181872 51182239 -38322314 - L1PA6 LINE L1 -6 6148 5789 2339 80 0 0 chr17 51182239 51182716 -38321837 - AluY SINE Alu 0 311 1 6206 53 22 5 chr17 51182716 51183228 -38321325 - L1PA6 LINE L1 -365 5789 5254 630 265 113 10 chr17 51183466 51183670 -38320883 - MIR SINE MIR 0 262 38 239 327 69 0 chr17 51184114 51184215 -38320338 + MIR3 SINE MIR 78 185 -23 299 277 43 11 chr17 51184463 51184557 -38319996 + MIR SINE MIR 48 144 -118 1986 132 10 3 chr17 51184699 51185003 -38319550 - AluJo SINE Alu -6 306 1 252 265 41 61 chr17 51185186 51185284 -38319269 - MIR SINE MIR -56 206 111 614 189 256 5 chr17 51185914 51186105 -38318448 + MIR SINE MIR 9 247 -15 201 290 224 9 chr17 51186156 51186263 -38318290 + L2 LINE L2 3139 3268 -4 1444 204 7 36 chr17 51186278 51186587 -38317966 - AluJb SINE Alu -12 300 1 180 0 0 0 chr17 51186636 51186656 -38317897 + (T)n Simple_repeat Simple_repeat 1 20 0 261 83 17 50 chr17 51187121 51187164 -38317389 + (TTCC)n Simple_repeat Simple_repeat 3 45 -15 2067 130 0 9 chr17 51187164 51187479 -38317074 - AluSq SINE Alu -1 312 1 261 83 17 50 chr17 51187479 51187495 -38317058 + (TTCC)n Simple_repeat Simple_repeat 45 60 0 2093 112 3 3 chr17 51187816 51188112 -38316441 - AluSg SINE Alu -8 302 7 2039 144 0 0 chr17 51188116 51188421 -38316132 - AluSx SINE Alu -7 305 1 180 125 0 0 chr17 51188625 51188657 -38315896 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 322 231 133 49 chr17 51189378 51189521 -38315032 - L1ME4a LINE L1 -1 6120 5966 377 222 10 53 chr17 51189648 51189747 -38314806 + MIR SINE MIR 79 173 -89 282 116 0 0 chr17 51190298 51190341 -38314212 + (TG)n Simple_repeat Simple_repeat 1 43 0 327 279 41 16 chr17 51190687 51190809 -38313744 - L2 LINE L2 -11 3261 3137 244 293 102 14 chr17 51191082 51191229 -38313324 + MIR SINE MIR 33 192 -70 643 279 29 20 chr17 51191909 51192113 -38312440 - MER63A DNA MER1_type 0 210 5 193 260 96 48 chr17 51192145 51192180 -38312373 - MIR SINE MIR -27 235 203 2103 120 0 7 chr17 51192180 51192480 -38312073 - AluSx SINE Alu -14 298 1 193 260 96 48 chr17 51192480 51192548 -38312005 - MIR SINE MIR -59 203 127 269 208 83 42 chr17 51192616 51192712 -38311841 - MIR3 SINE MIR 0 208 109 376 294 20 39 chr17 51192853 51193006 -38311547 - L3 LINE CR1 -717 860 711 24 32 0 0 chr17 51194051 51194082 -38310471 + GC_rich Low_complexity Low_complexity 1 31 0 468 0 0 0 chr17 51194719 51194771 -38309782 + (TG)n Simple_repeat Simple_repeat 2 53 0 316 271 42 0 chr17 51195280 51195376 -38309177 + MIR3 SINE MIR 61 160 -48 810 193 134 30 chr17 51195488 51195690 -38308863 + MIR SINE MIR 33 255 -7 2223 99 13 0 chr17 51195693 51195997 -38308556 - AluSx SINE Alu -4 308 1 300 111 25 22 chr17 51196761 51196874 -38307679 - MIR3 SINE MIR -1 207 123 1935 133 7 0 chr17 51196995 51197289 -38307264 - AluSx SINE Alu -16 296 1 293 304 88 0 chr17 51197375 51197477 -38307076 - MIR SINE MIR -75 133 23 203 244 90 13 chr17 51197737 51197815 -38306738 + MIR SINE MIR 29 112 -96 1856 135 35 0 chr17 51198030 51198318 -38306235 - AluSx SINE Alu -14 298 1 447 265 141 24 chr17 51198497 51198667 -38305886 + MIR SINE MIR 56 245 -17 1275 199 42 68 chr17 51198786 51198808 -38305745 - L1ME1 LINE L1 -21 6145 6124 2079 128 3 0 chr17 51198808 51199113 -38305440 - AluSx SINE Alu -6 306 1 1275 199 42 68 chr17 51199113 51199471 -38305082 - L1ME1 LINE L1 -42 6124 5775 808 116 217 0 chr17 51199571 51199747 -38304806 + AluSq SINE Alu 117 322 0 797 170 0 21 chr17 51199969 51200110 -38304443 + FLAM_C SINE Alu 1 138 -5 2178 116 0 0 chr17 51200119 51200421 -38304132 + AluSg SINE Alu 1 302 -8 1571 177 146 37 chr17 51200421 51200844 -38303709 - L1ME1 LINE L1 -422 5742 5259 1937 121 0 0 chr17 51200844 51201142 -38303411 - AluSx SINE Alu 0 309 12 1571 177 146 37 chr17 51201142 51201389 -38303164 - L1ME1 LINE L1 -905 5259 5040 306 0 0 0 chr17 51201389 51201423 -38303130 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1552 129 4 4 chr17 51201650 51201882 -38302671 - AluJo SINE Alu -72 240 9 2163 101 10 0 chr17 51201902 51202199 -38302354 - AluSq SINE Alu -13 300 1 1175 247 39 0 chr17 51202199 51202482 -38302071 - L1ME1 LINE L1 -1118 5028 4735 1199 273 16 0 chr17 51202505 51202824 -38301729 - L1ME1 LINE L1 -1382 4764 4441 634 219 90 17 chr17 51203350 51203528 -38301025 + MIR SINE MIR 11 201 -61 277 200 88 62 chr17 51203687 51203767 -38300786 - MIR SINE MIR -43 219 138 871 189 0 18 chr17 51203782 51203951 -38300602 - FRAM SINE Alu -15 161 1 275 158 18 53 chr17 51204748 51204805 -38299748 - MER46C DNA MER2_type -25 313 259 2349 87 3 0 chr17 51204805 51205115 -38299438 + AluSq SINE Alu 1 311 -2 29 28 0 0 chr17 51205159 51205195 -38299358 + AT_rich Low_complexity Low_complexity 1 36 0 768 262 85 8 chr17 51205199 51205447 -38299106 - MER46C DNA MER2_type -71 267 1 2186 105 0 9 chr17 51205494 51205809 -38298744 - AluSx SINE Alu 0 312 1 402 179 0 0 chr17 51205966 51206033 -38298520 - FLAM_A SINE Alu -53 79 13 4909 189 43 64 chr17 51206068 51206104 -38298449 + L1MB7 LINE L1 2 37 -6505 2304 72 3 7 chr17 51206104 51206409 -38298144 + AluY SINE Alu 1 304 -7 4909 189 43 64 chr17 51206409 51207570 -38296983 + L1MB7 LINE L1 37 1173 -5369 693 169 15 15 chr17 51207570 51207700 -38296853 - FLAM_C SINE Alu -12 131 2 3112 188 52 39 chr17 51207700 51208357 -38296196 + L1MB7 LINE L1 1163 1809 -4837 1335 203 14 21 chr17 51208357 51208648 -38295905 + AluJb SINE Alu 2 290 -22 3112 188 52 39 chr17 51208648 51208868 -38295685 + L1MB7 LINE L1 1809 2025 -4621 2046 134 0 0 chr17 51208868 51209173 -38295380 + AluSx SINE Alu 1 305 -7 418 266 46 23 chr17 51209183 51209356 -38295197 + L1MB7 LINE L1 2253 2429 -4217 874 204 6 0 chr17 51209356 51209528 -38295025 - AluJo SINE Alu -139 173 1 1667 167 17 7 chr17 51209535 51209834 -38294719 - AluJo SINE Alu -4 308 7 1557 229 31 39 chr17 51209839 51210351 -38294202 + L1MB7 LINE L1 3758 4265 -2379 822 151 0 0 chr17 51210458 51210577 -38293976 + AluSq/x SINE Alu 2 120 -192 1993 105 0 0 chr17 51210577 51210854 -38293699 - AluSx SINE Alu -35 277 1 265 122 0 0 chr17 51210924 51210965 -38293588 - L1P4 LINE L1 -417 5751 5711 * 1887 232 22 8 chr17 51210959 51211463 -38293090 + L1MB7 LINE L1 5081 5591 -1053 4179 191 31 21 chr17 51211644 51212704 -38291849 + L1MB7 LINE L1 5594 6663 -19 762 169 0 0 chr17 51213143 51213261 -38291292 + FLAM_C SINE Alu 1 118 -15 21 0 0 0 chr17 51213642 51213663 -38290890 + AT_rich Low_complexity Low_complexity 1 21 0 773 144 0 16 chr17 51213683 51213808 -38290745 - FLAM_C SINE Alu -19 124 2 2079 121 3 16 chr17 51214611 51214926 -38289627 - AluSx SINE Alu -1 311 1 316 280 206 21 chr17 51214998 51215187 -38289366 + MIR SINE MIR 20 243 -19 611 211 22 94 chr17 51215426 51215606 -38288947 + MIR SINE MIR 63 229 -33 313 269 0 0 chr17 51215572 51215639 -38288914 - MIR SINE MIR -10 252 186 * 567 213 11 33 chr17 51216502 51216646 -38287907 + LTR39 LTR ERV1 475 776 -7 448 191 138 86 chr17 51216792 51216944 -38287609 - MER69 DNA AcHobo 0 2526 18 319 145 43 58 chr17 51217581 51217650 -38286903 + L2 LINE L2 3201 3268 -4 459 0 0 0 chr17 51217722 51217773 -38286780 + (ATG)n Simple_repeat Simple_repeat 2 52 0 1917 115 21 0 chr17 51217773 51218075 -38286478 - AluSx SINE Alu 0 308 1 685 85 0 21 chr17 51218610 51218704 -38285849 + AluS SINE Alu 2 93 -219 1782 102 4 0 chr17 51218709 51218955 -38285598 - AluSq SINE Alu -56 257 11 996 111 7 13 chr17 51219081 51219234 -38285319 - AluSx SINE Alu -159 153 2 217 263 0 35 chr17 51219330 51219387 -38285166 + MIR SINE MIR 96 150 -58 1017 222 33 0 chr17 51219829 51220041 -38284512 - MER20 DNA MER1_type 0 219 1 1950 97 4 4 chr17 51220652 51220931 -38283622 + AluY SINE Alu 1 279 -32 225 0 0 0 chr17 51220931 51220956 -38283597 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 581 242 23 0 chr17 51221330 51221458 -38283095 + MER5A DNA MER1_type 37 167 -22 196 284 135 68 chr17 51221814 51221962 -38282591 + L2 LINE L2 3156 3313 0 22 35 0 0 chr17 51222463 51222492 -38282061 + AT_rich Low_complexity Low_complexity 1 29 0 801 261 16 5 chr17 51222622 51222810 -38281743 - MER58C DNA MER1_type -11 204 15 222 322 0 68 chr17 51222992 51223110 -38281443 - MIR3 SINE MIR -3 205 96 677 176 17 0 chr17 51223668 51223787 -38280766 - FLAM_C SINE Alu -12 121 1 270 218 165 77 chr17 51223787 51223957 -38280596 - L1ME3 LINE L1 -47 6115 5931 2084 121 0 0 chr17 51223967 51224264 -38280289 + AluSq SINE Alu 1 297 -16 1328 115 31 0 chr17 51224264 51224456 -38280097 - AluSq SINE Alu -114 199 2 971 324 99 12 chr17 51224608 51225206 -38279347 + L1MC4a LINE L1 5284 5933 -1875 320 275 26 83 chr17 51225239 51225392 -38279161 + L1ME4a LINE L1 5939 6080 -41 1731 173 3 10 chr17 51225392 51225704 -38278849 + AluJb SINE Alu 1 310 -2 320 275 26 83 chr17 51225704 51225743 -38278810 + L1ME4a LINE L1 6080 6120 -1 221 341 73 37 chr17 51226667 51226831 -38277722 + L2 LINE L2 2715 2884 -430 2451 65 0 10 chr17 51227055 51227364 -38277189 - AluY SINE Alu -5 306 1 886 232 66 0 chr17 51227515 51227726 -38276827 - MIR SINE MIR -25 237 13 225 94 0 0 chr17 51230901 51230933 -38273620 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 2103 120 3 0 chr17 51231618 51231926 -38272627 + AluSq SINE Alu 1 309 -4 26 30 0 0 chr17 51232060 51232093 -38272460 + AT_rich Low_complexity Low_complexity 1 33 0 1502 168 53 34 chr17 51232279 51232553 -38272000 - Tigger3(Golem) DNA MER2_type 0 3028 2760 2271 107 0 3 chr17 51232553 51232863 -38271690 + AluSx SINE Alu 1 309 -3 1502 168 53 34 chr17 51232863 51232964 -38271589 - Tigger3(Golem) DNA MER2_type -268 2760 1 2371 93 0 0 chr17 51233442 51233752 -38270801 - AluSg SINE Alu 0 310 1 1273 153 165 4 chr17 51233754 51234009 -38270544 - AluJb SINE Alu -16 296 1 862 222 51 19 chr17 51234260 51234476 -38270077 + L1MC4 LINE L1 6767 6989 -1053 4836 160 46 12 chr17 51234485 51235554 -38268999 - L1MB7 LINE L1 -9 6175 5069 1853 242 47 25 chr17 51235554 51236145 -38268408 + L1MC4 LINE L1 6977 7580 -462 833 148 0 15 chr17 51236156 51236291 -38268262 + FLAM_C SINE Alu 1 133 0 1910 139 3 10 chr17 51236295 51236590 -38267963 - AluSx SINE Alu -15 297 5 438 218 16 32 chr17 51237710 51237834 -38266719 + MLT1K LTR MaLR 458 579 -9 942 219 5 10 chr17 51238495 51238700 -38265853 - Zaphod DNA AcHobo -19 4012 3809 685 180 0 0 chr17 51238708 51238819 -38265734 - AluSg/x SINE Alu -9 303 193 537 142 44 0 chr17 51238832 51238945 -38265608 - Zaphod DNA AcHobo -288 3743 3626 1973 191 102 72 chr17 51238956 51239085 -38265468 - Zaphod DNA AcHobo -3048 983 859 2052 124 7 0 chr17 51239085 51239212 -38265341 + AluSg SINE Alu 2 127 -183 183 42 0 0 chr17 51239212 51239236 -38265317 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2052 124 7 0 chr17 51239236 51239398 -38265155 + AluSg SINE Alu 127 293 -17 1973 191 102 72 chr17 51239398 51239451 -38265102 - Zaphod DNA AcHobo -3172 859 809 2376 70 0 3 chr17 51239451 51239750 -38264803 + AluY SINE Alu 1 298 -13 1973 191 102 72 chr17 51239750 51239958 -38264595 - Zaphod DNA AcHobo -3222 809 609 3270 118 11 34 chr17 51239958 51240384 -38264169 + MER75 DNA T2_type 2 415 -99 2212 119 3 3 chr17 51240384 51240696 -38263857 + AluSx SINE Alu 1 312 0 3270 118 11 34 chr17 51240696 51240794 -38263759 + MER75 DNA T2_type 415 514 0 1973 191 102 72 chr17 51240794 51241235 -38263318 - Zaphod DNA AcHobo -3422 609 101 2138 108 35 3 chr17 51241235 51241523 -38263030 - AluSx SINE Alu -15 297 1 1973 191 102 72 chr17 51241523 51241628 -38262925 - Zaphod DNA AcHobo -3930 101 1 1314 140 5 0 chr17 51241681 51241867 -38262686 - AluSc SINE Alu -20 289 103 209 329 24 12 chr17 51242074 51242156 -38262397 - MIR SINE MIR -179 83 1 300 317 50 17 chr17 51242334 51242454 -38262099 - MIR SINE MIR -19 243 120 1998 141 0 10 chr17 51243032 51243323 -38261230 + AluJo SINE Alu 1 288 -24 5017 55 0 0 chr17 51243535 51244138 -38260415 + L1PA5 LINE L1 5549 6151 -3 192 254 51 17 chr17 51244386 51244445 -38260108 + MIR SINE MIR 28 88 -174 1445 166 68 40 chr17 51244596 51244892 -38259661 - AluJb SINE Alu -8 304 1 940 198 31 141 chr17 51244986 51245050 -38259503 + L1ME1 LINE L1 5757 5826 -340 1902 82 24 31 chr17 51245050 51245172 -38259381 + L1MA2 LINE L1 6016 6137 -167 2373 99 3 6 chr17 51245172 51245485 -38259068 + AluSq SINE Alu 1 312 -1 1902 82 24 31 chr17 51245485 51245652 -38258901 + L1MA2 LINE L1 6137 6304 0 940 198 31 141 chr17 51245652 51245823 -38258730 + L1ME1 LINE L1 5826 5921 -245 2102 113 3 52 chr17 51245823 51246151 -38258402 + AluSx SINE Alu 1 312 0 940 198 31 141 chr17 51246151 51246369 -38258184 + L1ME1 LINE L1 5921 6161 -5 1689 126 0 0 chr17 51246744 51246974 -38257579 - AluSg SINE Alu -48 262 33 2259 117 3 0 chr17 51247328 51247636 -38256917 + AluSx SINE Alu 1 309 -3 182 376 55 30 chr17 51247638 51247724 -38256829 - MIR SINE MIR -3 259 177 2208 100 0 0 chr17 51247724 51248133 -38256420 - AluSx SINE Alu 0 421 13 182 376 55 30 chr17 51248133 51248210 -38256343 - MIR SINE MIR -85 177 91 2013 119 28 3 chr17 51248212 51248498 -38256055 + AluJo SINE Alu 1 293 -19 386 261 261 20 chr17 51248508 51248707 -38255846 - MIR SINE MIR -11 251 5 304 340 0 39 chr17 51249482 51249585 -38254968 - MIR SINE MIR -59 149 51 1805 204 39 62 chr17 51249681 51249859 -38254694 - L1MC5 LINE L1 -303 7658 7477 2355 114 0 9 chr17 51249859 51250174 -38254379 - AluSq SINE Alu -1 312 1 1805 204 39 62 chr17 51250174 51250487 -38254066 - L1MC5 LINE L1 -484 7477 7181 1951 141 0 39 chr17 51250487 51250793 -38253760 - AluSx SINE Alu -18 294 1 1805 204 39 62 chr17 51250793 51250894 -38253659 - L1MC5 LINE L1 -780 7181 7079 907 169 7 7 chr17 51251052 51251206 -38253347 + FRAM SINE Alu 1 154 -22 293 319 17 34 chr17 51251300 51251419 -38253134 - MIR3 SINE MIR -11 197 81 1371 271 45 22 chr17 51252036 51252498 -38252055 - MLT1J LTR MaLR 0 511 39 1878 147 0 4 chr17 51252747 51253020 -38251533 - AluJb SINE Alu -38 274 3 717 196 39 11 chr17 51253246 51253425 -38251128 - L1ME3A LINE L1 0 6170 5987 2291 114 0 0 chr17 51253461 51253759 -38250794 - AluSq SINE Alu -15 298 1 292 210 0 16 chr17 51253761 51253823 -38250730 + MER5B DNA MER1_type 117 177 -1 272 139 0 0 chr17 51253833 51253876 -38250677 + MER5B DNA MER1_type 1 43 -135 290 219 123 0 chr17 51253934 51254007 -38250546 + MIR SINE MIR 67 148 -114 280 239 274 0 chr17 51254398 51254515 -38250038 - MIR SINE MIR -3 259 111 490 264 64 54 chr17 51254710 51254981 -38249572 - L1ME4a LINE L1 -1 6120 5844 2369 119 0 0 chr17 51254981 51255291 -38249262 - AluSq SINE Alu -3 310 1 490 264 64 54 chr17 51255291 51255314 -38249239 - L1ME4a LINE L1 -277 5844 5823 714 242 38 6 chr17 51255315 51255472 -38249081 - MER5B DNA MER1_type -16 162 1 1949 132 50 4 chr17 51255482 51255642 -38248911 - AluSx SINE Alu -18 294 114 189 0 0 0 chr17 51255642 51255663 -38248890 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1949 132 50 4 chr17 51255663 51255783 -38248770 - AluSx SINE Alu -198 114 1 278 240 55 34 chr17 51255783 51255897 -38248656 - L1ME4a LINE L1 -295 5826 5707 967 276 5 5 chr17 51255897 51256118 -38248435 - MER58A DNA MER1_type 0 224 4 278 240 55 34 chr17 51256118 51256149 -38248404 - L1ME4a LINE L1 -414 5707 5678 2047 96 59 4 chr17 51256213 51256517 -38248036 - AluSq SINE Alu 0 319 1 384 175 10 107 chr17 51256826 51256891 -38247662 - L1ME4a LINE L1 -468 5653 5600 2151 145 0 0 chr17 51256891 51257187 -38247366 + AluSx SINE Alu 1 296 -16 384 175 10 107 chr17 51257187 51257224 -38247329 - L1ME4a LINE L1 -521 5600 5561 367 229 185 25 chr17 51257828 51258126 -38246427 - MLT1H LTR MaLR -2 547 180 278 343 18 42 chr17 51258291 51258457 -38246096 - MLT1K LTR MaLR -358 230 69 393 278 134 48 chr17 51258879 51259066 -38245487 + L2 LINE L2 3069 3271 -1 333 328 47 26 chr17 51259069 51259261 -38245292 + L2 LINE L2 2223 2418 -896 2159 152 41 110 chr17 51259357 51259665 -38244888 - L1MB5 LINE L1 0 6174 5846 207 0 0 0 chr17 51259665 51259688 -38244865 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2142 106 7 3 chr17 51259688 51259970 -38244583 - AluSx SINE Alu -27 285 3 2159 152 41 110 chr17 51259970 51260251 -38244302 - L1MB5 LINE L1 -326 5848 5625 2160 106 11 0 chr17 51260593 51260898 -38243655 - AluSx SINE Alu 0 308 1 245 278 52 10 chr17 51260921 51261018 -38243535 + L2 LINE L2 2921 3021 -251 689 248 0 25 chr17 51261453 51261614 -38242939 - MIR SINE MIR 0 262 106 382 194 0 0 chr17 51261737 51261804 -38242749 - MER103 DNA DNA -53 113 47 223 171 0 24 chr17 51261880 51261921 -38242632 - MIR SINE MIR -55 153 114 279 167 21 0 chr17 51262011 51262059 -38242494 + MER58A DNA MER1_type 26 74 -33 388 283 51 43 chr17 51262059 51262197 -38242356 - MIR3 SINE MIR -49 159 21 191 274 113 0 chr17 51262199 51262261 -38242292 + L2 LINE L2 3151 3219 -53 2314 88 0 14 chr17 51262311 51262606 -38241947 - AluSg SINE Alu -2 308 18 180 77 0 0 chr17 51263520 51263546 -38241007 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 401 271 101 0 chr17 51263604 51263733 -38240820 + MIR SINE MIR 50 191 -71 1650 187 55 11 chr17 51263826 51264173 -38240380 + MLT1F1 LTR MaLR 206 567 0 235 224 41 0 chr17 51264173 51264222 -38240331 + MIR SINE MIR 158 208 -54 2327 101 10 0 chr17 51264268 51264575 -38239978 + AluSx SINE Alu 1 310 -2 2030 167 37 2 chr17 51264659 51265103 -38239450 + MER89 LTR ERV1 1 559 0 577 266 119 28 chr17 51265202 51265420 -38239133 + MIR SINE MIR 11 248 -14 210 125 75 0 chr17 51265819 51265859 -38238694 + MIR SINE MIR 108 150 -112 1793 161 33 13 chr17 51265862 51266166 -38238387 + AluJo SINE Alu 2 311 -1 1436 193 86 52 chr17 51266235 51266618 -38237935 - MSTD LTR MaLR 0 396 1 240 308 39 39 chr17 51266690 51266794 -38237759 + L2 LINE L2 2545 2648 -666 2467 43 0 36 chr17 51266980 51267321 -38237232 - AluY SINE Alu 0 311 1 536 102 31 31 chr17 51267428 51267556 -38236997 + GA-rich Low_complexity Low_complexity 1 128 0 485 159 44 165 chr17 51267648 51267830 -38236723 + MER5A DNA MER1_type 30 189 0 27 0 0 0 chr17 51268076 51268103 -38236450 + AT_rich Low_complexity Low_complexity 1 27 0 189 358 42 0 chr17 51268281 51268376 -38236177 + L3b LINE CR1 1332 1430 -153 25 31 0 0 chr17 51268521 51268553 -38236000 + GC_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 51268904 51268927 -38235626 + GC_rich Low_complexity Low_complexity 1 23 0 2106 91 22 0 chr17 51271284 51271464 -38233089 - AluSx SINE Alu 0 313 123 189 0 0 0 chr17 51271464 51271485 -38233068 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2106 91 22 0 chr17 51271485 51271611 -38232942 - AluSx SINE Alu -190 123 1 2406 64 0 0 chr17 51271637 51271941 -38232612 + AluY SINE Alu 2 305 0 202 95 48 0 chr17 51271950 51271992 -38232561 + CT-rich Low_complexity Low_complexity 1 44 0 560 257 44 62 chr17 51272561 51272779 -38231774 + MIR SINE MIR 42 262 0 258 32 0 0 chr17 51272848 51272879 -38231674 + (A)n Simple_repeat Simple_repeat 1 31 0 466 248 120 0 chr17 51272982 51273107 -38231446 - MIR SINE MIR -91 171 32 2612 40 0 0 chr17 51273112 51273408 -38231145 - AluY SINE Alu -14 297 2 191 319 43 43 chr17 51273412 51273528 -38231025 - MIR SINE MIR -65 197 82 * 279 281 0 0 chr17 51273521 51273585 -38230968 - L2 LINE L2 -2 3311 3248 798 159 0 36 chr17 51274399 51274537 -38230016 + FLAM_C SINE Alu 1 133 0 238 196 0 39 chr17 51274613 51274664 -38229889 - MIR SINE MIR -153 109 61 199 242 61 45 chr17 51274986 51275052 -38229501 - L2 LINE L2 -52 3220 3154 301 298 13 25 chr17 51275514 51275655 -38228898 + GA-rich Low_complexity Low_complexity 1 139 0 304 304 52 0 chr17 51276165 51276280 -38228273 + MIR SINE MIR 93 213 -49 198 0 0 0 chr17 51276501 51276523 -38228030 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1892 125 54 0 chr17 51276523 51276792 -38227761 - AluSx SINE Alu -25 287 1 358 325 128 46 chr17 51276805 51277156 -38227397 - L1ME4a LINE L1 -10 6111 5732 2171 116 17 0 chr17 51277301 51277603 -38226950 - AluSx SINE Alu -5 307 1 449 205 226 29 chr17 51277705 51277919 -38226634 - MIR SINE MIR -6 256 4 500 196 89 18 chr17 51278914 51279026 -38225527 + MER5B DNA MER1_type 7 126 -52 191 232 46 133 chr17 51278916 51279067 -38225486 - MER5A DNA MER1_type -15 174 37 * 203 343 137 0 chr17 51279211 51279357 -38225196 + MIR SINE MIR 76 241 -21 202 335 94 51 chr17 51279854 51280401 -38224152 + L2 LINE L2 2479 3044 -228 702 246 222 0 chr17 51280456 51280659 -38223894 - MIR SINE MIR 0 262 15 477 335 72 32 chr17 51280982 51281203 -38223350 - MIR SINE MIR -1 261 32 1391 171 5 5 chr17 51281214 51281436 -38223117 + AluJb SINE Alu 1 222 -90 455 156 52 0 chr17 51281490 51281567 -38222986 + AluJb SINE Alu 209 289 -23 1975 146 3 26 chr17 51281931 51282239 -38222314 + AluJb SINE Alu 1 301 -11 521 210 59 29 chr17 51283139 51283279 -38221274 + MIR3 SINE MIR 35 180 -28 379 278 62 28 chr17 51283550 51283694 -38220859 + MIR3 SINE MIR 21 169 -39 1790 159 14 14 chr17 51283766 51284061 -38220492 + AluJo SINE Alu 18 312 0 2245 121 3 0 chr17 51284301 51284599 -38219954 - AluSx SINE Alu -13 299 1 464 305 99 33 chr17 51284767 51284980 -38219573 + MIR SINE MIR 6 232 -30 405 256 129 58 chr17 51284993 51285508 -38219045 - MLT1F LTR MaLR -2 553 1 2298 96 14 10 chr17 51285519 51285812 -38218741 - AluSg SINE Alu -16 294 1 557 267 138 9 chr17 51286057 51286274 -38218279 - L1M4 LINE L1 -3792 2354 2110 1712 167 14 18 chr17 51286302 51286584 -38217969 - AluJo SINE Alu -9 303 23 2668 205 84 44 chr17 51286886 51287757 -38216796 - L1ME1 LINE L1 -30 6136 5237 181 222 185 49 chr17 51288914 51288995 -38215558 - MIR SINE MIR -60 202 111 2170 117 0 0 chr17 51290221 51290531 -38214022 - AluSx SINE Alu 0 310 1 1974 160 13 0 chr17 51290535 51290835 -38213718 - AluJb SINE Alu -8 304 1 2384 86 0 34 chr17 51291260 51291584 -38212969 + AluSp SINE Alu 1 313 0 208 135 0 27 chr17 51291996 51292033 -38212520 + (GGGTG)n Simple_repeat Simple_repeat 4 39 0 14232 29 16 3 chr17 51292361 51294817 -38209736 + L1PA4 LINE L1 3668 6155 0 28 0 0 0 chr17 51294817 51294845 -38209708 + AT_rich Low_complexity Low_complexity 1 28 0 548 277 63 29 chr17 51294987 51295193 -38209360 - MLT1K LTR MaLR -10 578 366 338 230 38 17 chr17 51295224 51295373 -38209180 - MLT1L LTR MaLR -240 274 114 184 299 52 21 chr17 51296894 51296991 -38207562 + MIR3 SINE MIR 13 112 -96 275 288 0 27 chr17 51297444 51297555 -38206998 + CT-rich Low_complexity Low_complexity 2 109 0 205 176 0 0 chr17 51297856 51297890 -38206663 - L2 LINE L2 -9 3304 3271 201 273 179 76 chr17 51297949 51298279 -38206274 + L2 LINE L2 2812 3175 -97 1192 235 97 60 chr17 51298279 51298846 -38205707 + MLT1G1 LTR MaLR 1 588 -7 245 308 13 0 chr17 51298858 51298936 -38205617 + L2 LINE L2 3235 3313 0 226 280 13 13 chr17 51299055 51299130 -38205423 + MLT1L LTR MaLR 460 534 -81 356 301 90 39 chr17 51299210 51299366 -38205187 - MIR SINE MIR -59 203 40 518 313 56 10 chr17 51299555 51299750 -38204803 - MIR SINE MIR -25 237 34 2391 83 0 7 chr17 51299791 51300091 -38204462 + AluSq SINE Alu 1 298 -15 409 248 124 0 chr17 51300142 51300247 -38204306 - MIR SINE MIR -96 166 49 2123 136 0 13 chr17 51300980 51301281 -38203272 - AluSx SINE Alu -15 297 1 2322 61 6 83 chr17 51301382 51301708 -38202845 - AluSp SINE Alu -12 301 1 309 231 176 0 chr17 51302321 51302429 -38202124 - MIR SINE MIR -125 137 11 477 280 40 34 chr17 51302910 51302962 -38201591 + MER5B DNA MER1_type 3 53 -125 2175 116 30 0 chr17 51302962 51303263 -38201290 + AluSx SINE Alu 1 310 -2 477 280 40 34 chr17 51303263 51303385 -38201168 + MER5B DNA MER1_type 53 178 0 207 228 219 9 chr17 51303463 51303577 -38200976 - MIR SINE MIR -111 151 14 521 209 131 20 chr17 51304751 51304904 -38199649 + MER5B DNA MER1_type 5 174 -4 291 259 189 28 chr17 51305938 51305976 -38198577 - MER5A DNA MER1_type 0 189 158 1949 147 6 38 chr17 51305976 51306290 -38198263 + AluSx SINE Alu 1 304 -8 291 259 189 28 chr17 51306290 51306394 -38198159 - MER5A DNA MER1_type -31 158 24 684 189 3 157 chr17 51309399 51309685 -38194868 + L1ME2 LINE L1 4822 5063 -1083 * 1261 238 31 60 chr17 51309678 51309699 -38194854 + L1ME2 LINE L1 5718 5738 -426 1713 176 20 3 chr17 51309699 51309994 -38194559 + AluJo SINE Alu 1 300 -12 1261 238 31 60 chr17 51309994 51310422 -38194131 + L1ME2 LINE L1 5738 6154 -10 23 0 0 0 chr17 51310881 51310904 -38193649 + AT_rich Low_complexity Low_complexity 1 23 0 1489 154 7 70 chr17 51313326 51313599 -38190954 - AluJb SINE Alu -16 296 41 362 154 44 121 chr17 51313599 51313690 -38190863 - MIR SINE MIR -65 143 60 1373 170 123 11 chr17 51313895 51314171 -38190382 - AluJb SINE Alu -5 307 1 29 0 0 0 chr17 51317181 51317210 -38187343 + AT_rich Low_complexity Low_complexity 1 29 0 210 91 0 0 chr17 51317798 51317831 -38186722 + (A)n Simple_repeat Simple_repeat 1 33 0 585 258 103 0 chr17 51318586 51318741 -38185812 - MIR SINE MIR -85 177 7 533 248 107 82 chr17 51320279 51321016 -38183537 + L1ME LINE L1 4962 5716 -446 231 284 0 15 chr17 51321760 51321827 -38182726 - MER5B DNA MER1_type -5 173 108 184 0 97 0 chr17 51321991 51322022 -38182531 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 227 239 0 84 chr17 51322272 51322343 -38182210 - MIR3 SINE MIR -19 189 125 406 192 222 0 chr17 51322428 51322527 -38182026 + L2 LINE L2 3193 3313 0 1001 187 27 0 chr17 51322554 51322741 -38181812 + MER58A DNA MER1_type 24 215 -9 2681 148 62 8 chr17 51323382 51323896 -38180657 + L1MB4 LINE L1 5639 6180 0 7614 39 0 0 chr17 51325367 51326612 -38177941 - L1PA5 LINE L1 -1 6153 4909 1032 134 126 17 chr17 51326740 51327117 -38177436 - LTR54 LTR ERV1 -31 479 1 222 343 113 34 chr17 51327443 51327682 -38176871 - L2 LINE L2 -23 3249 2992 2490 97 3 0 chr17 51327885 51328196 -38176357 - AluSx SINE Alu 0 312 1 518 345 124 43 chr17 51328685 51329145 -38175408 - L2 LINE L2 -19 3253 2747 402 21 0 0 chr17 51329218 51329265 -38175288 + (TG)n Simple_repeat Simple_repeat 2 48 0 524 78 39 0 chr17 51329283 51329360 -38175193 + MADE1 DNA Mariner 1 80 0 2350 89 0 3 chr17 51329484 51329787 -38174766 + AluSc SINE Alu 1 302 -7 3300 203 40 6 chr17 51330124 51330783 -38173770 + MSTD-int LTR MaLR 1055 1735 0 1422 232 93 19 chr17 51330786 51331152 -38173401 + MSTD LTR MaLR 4 396 0 2558 223 20 2 chr17 51332300 51332839 -38171714 + MLT1H1 LTR MaLR 1 549 -6 221 303 112 11 chr17 51332995 51333084 -38171469 - L2 LINE L2 -221 3051 2954 2442 96 0 6 chr17 51333182 51333495 -38171058 - AluSx SINE Alu -1 311 1 2308 110 10 0 chr17 51333803 51334111 -38170442 + AluSx SINE Alu 1 311 -1 387 357 104 34 chr17 51334269 51334597 -38169956 + L2 LINE L2 2911 3261 -11 308 314 27 12 chr17 51334808 51334962 -38169591 - MIR SINE MIR -67 141 41 342 329 13 39 chr17 51335905 51335952 -38168601 - MIR SINE MIR -63 145 98 2317 107 3 3 chr17 51335952 51336261 -38168292 - AluSx SINE Alu -3 309 1 342 329 13 39 chr17 51336261 51336379 -38168174 - MIR SINE MIR -110 98 34 299 331 25 38 chr17 51336598 51336758 -38167795 + MIR SINE MIR 55 212 -50 333 265 110 29 chr17 51337676 51337812 -38166741 - MIR3 SINE MIR -59 149 3 432 174 20 31 chr17 51338047 51338145 -38166408 + L1PA12 LINE L1 5991 6087 -81 * 492 56 0 0 chr17 51338117 51338188 -38166365 + L1PA13 LINE L1 6092 6162 -1 999 206 68 20 chr17 51338229 51338521 -38166032 + MER33 DNA MER1_type 1 306 -18 1537 150 95 12 chr17 51338533 51338786 -38165767 + AluJo SINE Alu 3 276 -36 1761 137 0 63 chr17 51339995 51340294 -38164259 - AluJo SINE Alu -19 293 14 246 300 21 12 chr17 51340637 51340741 -38163812 + MIR SINE MIR 36 139 -69 191 237 0 0 chr17 51340963 51341001 -38163552 + L2 LINE L2 3220 3257 -15 887 224 82 23 chr17 51341025 51341244 -38163309 + MIR SINE MIR 4 235 -27 1027 149 0 29 chr17 51341259 51341433 -38163120 + AluJo SINE Alu 123 291 -21 30 0 0 0 chr17 51341433 51341463 -38163090 + AT_rich Low_complexity Low_complexity 1 30 0 354 61 0 0 chr17 51342040 51342089 -38162464 + (CA)n Simple_repeat Simple_repeat 2 50 0 2243 85 3 13 chr17 51342486 51342792 -38161761 + AluSq SINE Alu 1 303 -10 240 298 0 0 chr17 51343222 51343279 -38161274 + (CCCA)n Simple_repeat Simple_repeat 2 58 0 914 140 6 0 chr17 51343284 51343463 -38161090 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 697 196 0 12 chr17 51343484 51343657 -38160896 + (CCCA)n Simple_repeat Simple_repeat 2 172 0 445 237 7 7 chr17 51343670 51343945 -38160608 + (CCCA)n Simple_repeat Simple_repeat 1 275 0 705 182 6 12 chr17 51343962 51344132 -38160421 + (TCCA)n Simple_repeat Simple_repeat 3 171 0 222 254 0 0 chr17 51344133 51344188 -38160365 + (CCCA)n Simple_repeat Simple_repeat 4 58 0 953 313 124 13 chr17 51344301 51344554 -38159999 - MLT1L LTR MaLR -21 594 371 2097 131 3 0 chr17 51344554 51344860 -38159693 - AluSq SINE Alu -6 307 1 953 313 124 13 chr17 51344860 51345136 -38159417 - MLT1L LTR MaLR -244 371 6 339 25 0 0 chr17 51345370 51345410 -38159143 + (CA)n Simple_repeat Simple_repeat 2 41 0 2300 100 0 3 chr17 51345760 51346070 -38158483 + AluSx SINE Alu 1 309 -3 348 322 155 28 chr17 51346239 51346413 -38158140 + L2 LINE L2 2736 2886 -427 2151 112 3 0 chr17 51346413 51346737 -38157816 + AluSx SINE Alu 1 325 0 348 322 155 28 chr17 51346737 51347060 -38157493 + L2 LINE L2 2886 3313 0 2009 123 3 0 chr17 51347324 51347611 -38156942 + AluSx SINE Alu 1 289 -18 933 142 0 0 chr17 51347611 51347766 -38156787 + (TA)n Simple_repeat Simple_repeat 2 156 0 517 260 20 14 chr17 51347877 51348023 -38156530 - MIR SINE MIR -102 160 14 3919 125 25 50 chr17 51348118 51348475 -38156078 - L1MB7 LINE L1 -6 6178 5844 1510 171 0 49 chr17 51348475 51348810 -38155743 - AluSx SINE Alu 0 312 1 3919 125 25 50 chr17 51348810 51349130 -38155423 - L1MB7 LINE L1 -340 5844 5518 817 150 0 21 chr17 51350132 51350272 -38154281 + FLAM_C SINE Alu 7 143 0 742 173 0 50 chr17 51351291 51351430 -38153123 - FLAM_C SINE Alu -1 132 1 1952 100 0 53 chr17 51351434 51351905 -38152648 - AluY SINE Alu 0 455 1 227 259 54 80 chr17 51352162 51352274 -38152279 + MIR SINE MIR 122 230 -32 391 306 126 20 chr17 51352373 51352572 -38151981 - MIR SINE MIR -35 227 8 219 279 29 15 chr17 51353545 51353613 -38150940 - MIR SINE MIR -59 149 81 1954 138 10 0 chr17 51354668 51354973 -38149580 + AluSx SINE Alu 1 308 -4 288 296 54 43 chr17 51355013 51355199 -38149354 + L2 LINE L2 3120 3307 -6 313 369 120 8 chr17 51355261 51355502 -38149051 - L2 LINE L2 -86 3186 2919 2176 115 3 0 chr17 51355689 51355993 -38148560 + AluSx SINE Alu 7 311 -1 453 284 79 44 chr17 51356467 51356696 -38147857 + MIR SINE MIR 24 260 -2 441 287 79 35 chr17 51356847 51357049 -38147504 + MIR SINE MIR 49 259 -3 366 239 101 43 chr17 51357915 51358053 -38146500 - MIR SINE MIR -10 252 107 584 241 16 59 chr17 51358937 51359124 -38145429 + MIR SINE MIR 84 262 0 260 277 178 0 chr17 51359504 51359605 -38144948 - MIR SINE MIR 0 262 144 202 299 31 39 chr17 51359628 51359755 -38144798 + L2 LINE L2 2957 3082 -190 242 273 91 0 chr17 51359806 51359916 -38144637 - L1MC4a LINE L1 -1630 6178 6059 367 267 0 0 chr17 51360001 51360076 -38144477 + L2 LINE L2 3208 3282 -31 243 0 0 0 chr17 51360109 51360136 -38144417 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1943 109 7 4 chr17 51360143 51360417 -38144136 - AluSx SINE Alu -35 277 3 2239 113 0 0 chr17 51360785 51361094 -38143459 + AluSx SINE Alu 1 309 -3 484 92 0 0 chr17 51361138 51361214 -38143339 - LTR54 LTR ERV1 0 510 435 319 222 117 105 chr17 51361278 51361440 -38143113 - MER57B LTR ERV1 -164 270 107 507 133 67 0 chr17 51361446 51361536 -38143017 - LTR54 LTR ERV1 -411 99 4 226 286 0 0 chr17 51362019 51362075 -38142478 + GA-rich Low_complexity Low_complexity 1 56 0 2087 126 0 0 chr17 51362299 51362592 -38141961 + AluSx SINE Alu 1 293 -19 2017 125 0 52 chr17 51362596 51362924 -38141629 + AluSp SINE Alu 1 311 -2 532 328 40 11 chr17 51363106 51363283 -38141270 + MIR SINE MIR 48 229 -33 336 195 179 0 chr17 51364217 51364317 -38140236 + MIR SINE MIR 35 151 -62 2219 96 3 3 chr17 51364317 51364620 -38139933 + AluSq SINE Alu 1 303 -10 2326 57 0 14 chr17 51364620 51364916 -38139637 + AluY SINE Alu 1 292 -19 964 67 0 0 chr17 51365321 51365441 -38139112 + AluSp/q SINE Alu 156 275 -38 932 267 26 4 chr17 51365441 51365707 -38138846 + L1MC4 LINE L1 7406 7677 -365 897 172 0 0 chr17 51365725 51365876 -38138677 - FRAM SINE Alu -9 167 17 663 246 75 17 chr17 51365900 51366140 -38138413 + L1MC4 LINE L1 7688 7941 -101 406 312 116 17 chr17 51366323 51366496 -38138057 + MIR SINE MIR 3 192 -70 214 324 0 62 chr17 51367039 51367139 -38137414 + MIR SINE MIR 56 150 -58 213 368 64 24 chr17 51367161 51367286 -38137267 + MIR3 SINE MIR 8 137 -71 492 286 48 0 chr17 51367358 51367505 -38137048 + L2 LINE L2 3160 3313 0 246 232 73 12 chr17 51367781 51367863 -38136690 - Charlie8 DNA MER1_type -2198 219 133 195 306 20 0 chr17 51368194 51368243 -38136310 + L2 LINE L2 3219 3268 -4 221 277 136 52 chr17 51368250 51368405 -38136148 + MIR SINE MIR 83 250 -12 201 196 20 20 chr17 51368934 51368985 -38135568 + GA-rich Low_complexity Low_complexity 2 52 0 304 308 0 0 chr17 51371771 51371849 -38132704 - MER91A DNA MER1_type -116 80 3 218 268 89 71 chr17 51372040 51372152 -38132401 + MIR SINE MIR 40 153 -55 228 211 0 0 chr17 51372824 51372862 -38131691 + polypurine Low_complexity Low_complexity 4 41 0 2121 118 0 0 chr17 51373024 51373313 -38131240 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr17 51373313 51373343 -38131210 + AT_rich Low_complexity Low_complexity 1 30 0 1951 103 60 0 chr17 51373894 51374176 -38130377 - AluSg SINE Alu -11 299 1 1000 113 0 0 chr17 51374190 51374323 -38130230 - AluSq/x SINE Alu -177 135 3 322 328 64 0 chr17 51374475 51374600 -38129953 + L2 LINE L2 3139 3271 -1 423 0 0 0 chr17 51374768 51374815 -38129738 + (TG)n Simple_repeat Simple_repeat 1 47 0 197 152 0 0 chr17 51375517 51375550 -38129003 - MIR SINE MIR -116 146 114 325 336 44 15 chr17 51375652 51375789 -38128764 - MER5A DNA MER1_type -28 161 21 195 162 0 0 chr17 51376032 51376069 -38128484 + GA-rich Low_complexity Low_complexity 1 37 0 343 272 223 11 chr17 51376153 51376337 -38128216 + MIR SINE MIR 16 238 -24 239 350 21 10 chr17 51376409 51376506 -38128047 - MIR SINE MIR -57 151 54 466 311 11 40 chr17 51376614 51376695 -38127858 - MLT1I LTR MaLR -140 269 187 1913 143 13 0 chr17 51376695 51377002 -38127551 + AluJb SINE Alu 1 311 -1 466 311 11 40 chr17 51377002 51377097 -38127456 - MLT1I LTR MaLR -222 187 98 2110 113 7 0 chr17 51377894 51378185 -38126368 - AluSx SINE Alu -19 293 1 315 254 0 0 chr17 51378401 51378472 -38126081 + MER20 DNA MER1_type 91 161 -58 298 253 58 11 chr17 51378522 51378609 -38125944 + MER5A DNA MER1_type 1 91 -98 261 0 0 0 chr17 51379277 51379306 -38125247 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2038 96 0 14 chr17 51379312 51379592 -38124961 - AluSx SINE Alu -36 276 1 479 210 22 6 chr17 51380508 51380655 -38123898 + MIR SINE MIR 20 260 -2 244 197 395 0 chr17 51380652 51380728 -38123825 - L2 LINE L2 -21 3251 3146 * 477 209 0 0 chr17 51381410 51381558 -38122995 + (CA)n Simple_repeat Simple_repeat 2 149 0 1587 159 35 21 chr17 51381990 51382280 -38122273 + AluJb SINE Alu 1 294 -18 208 323 0 0 chr17 51383105 51383167 -38121386 - MIR SINE MIR -109 99 38 1794 109 0 4 chr17 51484740 51484988 -38019565 - AluSq SINE Alu -66 247 1 438 297 115 14 chr17 51485116 51485480 -38019073 - L2 LINE L2 -728 2586 2186 2253 115 0 0 chr17 51485583 51485896 -38018657 - AluSq SINE Alu 0 313 1 1833 169 13 0 chr17 51486488 51486826 -38017727 - AluJo SINE Alu 0 312 1 2064 132 7 0 chr17 51489217 51489520 -38015033 - AluSx SINE Alu -7 305 1 248 261 15 0 chr17 51489927 51489992 -38014561 - MER113 DNA MER1_type? 0 521 456 890 125 8 0 chr17 51490000 51490128 -38014425 - FLAM_C SINE Alu -3 130 2 1710 153 4 0 chr17 51490194 51490462 -38014091 + AluJo SINE Alu 35 303 -9 493 226 111 37 chr17 51490473 51490556 -38013997 + MIR SINE MIR 46 121 -141 2315 93 7 0 chr17 51490556 51490866 -38013687 + AluSq SINE Alu 1 312 -1 493 226 111 37 chr17 51490866 51490972 -38013581 + MIR SINE MIR 121 249 -13 832 259 84 13 chr17 51491941 51492180 -38012373 - MIR SINE MIR -1 261 6 1554 173 29 29 chr17 51492342 51492654 -38011899 + AluJo SINE Alu 1 312 0 2390 89 0 16 chr17 51494308 51494612 -38009941 + AluSx SINE Alu 1 299 -13 423 284 190 5 chr17 51495338 51495549 -38009004 - Charlie8 DNA MER1_type -2167 250 1 2027 125 10 30 chr17 51495658 51495961 -38008592 - AluSx SINE Alu -15 297 1 1105 83 0 0 chr17 51495965 51496098 -38008455 - AluSq/x SINE Alu -179 133 1 2900 10 0 0 chr17 51497116 51497425 -38007128 - AluY SINE Alu -2 309 1 517 143 128 23 chr17 51497468 51497601 -38006952 + L1MD3 LINE L1 7679 7825 -170 921 147 7 0 chr17 51497603 51497739 -38006814 - AluJo SINE Alu -175 137 1 741 199 12 0 chr17 51497739 51497910 -38006643 + L1MD3 LINE L1 7812 7984 -11 710 133 0 0 chr17 51498429 51498542 -38006011 + AluSq SINE Alu 121 233 -80 249 167 0 0 chr17 51498566 51498614 -38005939 + L1MD3 LINE L1 6904 6951 -1044 * 845 254 154 6 chr17 51498612 51498640 -38005913 + L1MC4 LINE L1 7545 7568 -474 1689 105 8 39 chr17 51498640 51498897 -38005656 + AluSc SINE Alu 61 309 0 845 254 154 6 chr17 51498897 51499199 -38005354 + L1MC4 LINE L1 7568 7924 -118 1878 160 17 10 chr17 51499302 51499596 -38004957 - AluJo SINE Alu -16 296 1 243 146 0 0 chr17 51499681 51499722 -38004831 + (TG)n Simple_repeat Simple_repeat 2 42 0 810 175 130 23 chr17 51499733 51499910 -38004643 - MER58A DNA MER1_type -1 223 28 24 0 0 0 chr17 51500586 51500610 -38003943 + AT_rich Low_complexity Low_complexity 1 24 0 234 379 29 14 chr17 51500672 51500812 -38003741 + MIR SINE MIR 20 161 -101 882 178 59 24 chr17 51500948 51501117 -38003436 + FRAM SINE Alu 1 174 -2 2242 122 3 6 chr17 51503482 51503794 -38000759 - AluSq SINE Alu -2 311 1 2370 113 0 0 chr17 51504335 51504636 -37999917 - AluSq SINE Alu -12 301 1 328 373 46 0 chr17 51504780 51504933 -37999620 + L1ME4a LINE L1 5943 6102 -19 782 176 0 0 chr17 51505017 51505142 -37999411 + FLAM_C SINE Alu 1 125 -8 936 164 0 0 chr17 51505365 51505511 -37999042 + FAM SINE Alu 1 43 -6 2089 113 11 3 chr17 51505564 51505874 -37998679 + AluSq SINE Alu 1 312 0 1915 191 0 0 chr17 51505984 51506282 -37998271 + AluJb SINE Alu 5 302 -10 587 311 61 38 chr17 51506460 51506753 -37997800 + L3 LINE CR1 219 518 -1059 2475 51 14 3 chr17 51506903 51507198 -37997355 - AluY SINE Alu -13 298 1 1669 129 144 11 chr17 51507202 51507465 -37997088 - AluSx SINE Alu -14 298 1 1723 181 0 0 chr17 51507474 51507781 -37996772 - AluJb SINE Alu 0 307 1 591 219 54 80 chr17 51508278 51508502 -37996051 + MER112 DNA MER1_type 3 220 -40 2094 110 31 7 chr17 51508586 51508877 -37995676 + AluSg SINE Alu 1 298 -12 225 346 0 0 chr17 51508879 51508960 -37995593 + L3 LINE CR1 694 774 -803 805 176 22 0 chr17 51509173 51509309 -37995244 + AluJb SINE Alu 1 139 -173 886 298 60 16 chr17 51509309 51509628 -37994925 + L3 LINE CR1 828 1160 -417 482 299 131 14 chr17 51509643 51509864 -37994689 + L3 LINE CR1 1303 1549 -28 2389 82 0 3 chr17 51509870 51510163 -37994390 + AluSx SINE Alu 1 292 -20 286 324 240 13 chr17 51511448 51511923 -37992630 + L2 LINE L2 1709 2291 -1023 1891 175 0 19 chr17 51513658 51513972 -37990581 + AluJo SINE Alu 5 312 0 596 261 38 38 chr17 51514229 51514440 -37990113 + L2 LINE L2 1725 1935 -1379 2396 77 7 10 chr17 51514442 51514739 -37989814 - AluY SINE Alu -9 302 7 1684 82 5 23 chr17 51514747 51514967 -37989586 - AluSc SINE Alu -15 294 79 1480 216 126 28 chr17 51515067 51515873 -37988680 + L2 LINE L2 2426 3313 0 514 106 0 0 chr17 51516189 51516274 -37988279 + AluSc SINE Alu 225 309 0 2428 87 3 0 chr17 51516277 51516577 -37987976 + AluSc SINE Alu 1 301 -8 2177 119 3 0 chr17 51516931 51517226 -37987327 - AluSx SINE Alu -16 296 1 714 120 30 60 chr17 51518235 51518368 -37986185 + FLAM_C SINE Alu 1 129 -4 251 261 101 25 chr17 51522223 51522342 -37982211 - MER5A DNA MER1_type -7 182 55 * 253 309 46 26 chr17 51522235 51522387 -37982166 + MER5A DNA MER1_type 35 189 0 293 287 147 7 chr17 51522506 51522649 -37981904 + MIR SINE MIR 7 169 -93 206 118 0 0 chr17 51522660 51522694 -37981859 + (A)n Simple_repeat Simple_repeat 1 34 0 294 264 101 40 chr17 51522708 51522856 -37981697 + MER112 DNA MER1_type 39 195 -65 211 267 108 25 chr17 51522955 51523075 -37981478 + L2 LINE L2 2657 2786 -528 1765 180 20 7 chr17 51523309 51523604 -37980949 + AluJo SINE Alu 1 299 -13 2338 98 3 0 chr17 51524175 51524471 -37980082 - AluSx SINE Alu -13 299 3 2172 104 0 0 chr17 51524678 51524978 -37979575 - AluSg SINE Alu 0 300 1 21 0 0 0 chr17 51524978 51524999 -37979554 + AT_rich Low_complexity Low_complexity 1 21 0 1691 118 0 0 chr17 51525008 51525236 -37979317 - AluJo SINE Alu -84 228 1 512 207 143 29 chr17 51525237 51525377 -37979176 + MER5B DNA MER1_type 17 172 -6 343 323 11 0 chr17 51525724 51525817 -37978736 + L2 LINE L2 3179 3272 0 215 305 23 23 chr17 51525850 51525978 -37978575 + CT-rich Low_complexity Low_complexity 3 130 0 1453 55 0 20 chr17 51526107 51526306 -37978247 + L1PA6 LINE L1 5960 6154 0 2298 111 0 0 chr17 51526612 51526918 -37977635 - AluSx SINE Alu -6 306 1 189 237 0 0 chr17 51527530 51527568 -37976985 - L2 LINE L2 -9 3263 3226 2335 123 0 0 chr17 51527647 51527955 -37976598 + AluSx SINE Alu 3 310 -2 1860 137 0 45 chr17 51527973 51528287 -37976266 + AluJo SINE Alu 1 300 -12 2280 123 7 0 chr17 51529508 51529816 -37974737 - AluSx SINE Alu -2 310 1 583 210 149 11 chr17 51531458 51531639 -37972914 + MIR SINE MIR 51 256 -6 1664 184 3 36 chr17 51531708 51532012 -37972541 + AluJo SINE Alu 5 298 -14 2303 86 4 0 chr17 51532032 51532333 -37972220 + AluSp SINE Alu 6 307 0 454 296 64 15 chr17 51532815 51533018 -37971535 - MIR SINE MIR -2 260 48 300 207 158 0 chr17 51534554 51534636 -37969917 - MER5A DNA MER1_type -84 105 11 430 102 90 249 chr17 51534661 51534733 -37969820 + MER5B DNA MER1_type 8 87 -91 273 110 3 0 chr17 51534733 51534777 -37969776 - AluSq/x SINE Alu -181 121 84 430 102 90 249 chr17 51534777 51534838 -37969715 + MER5B DNA MER1_type 87 156 -22 432 186 93 34 chr17 51535090 51535208 -37969345 - L3 LINE CR1 -157 1420 1296 925 115 23 0 chr17 51535251 51535367 -37969186 + AluSq/x SINE Alu 1 122 -191 2490 94 0 3 chr17 51535367 51535676 -37968877 + AluSc SINE Alu 2 309 0 925 115 23 0 chr17 51535676 51535689 -37968864 + AluSq/x SINE Alu 122 133 -180 243 241 121 24 chr17 51537791 51537874 -37966679 - MIR SINE MIR -142 120 30 523 312 84 72 chr17 51537966 51538408 -37966145 - L2 LINE L2 -4 3309 2863 1536 184 49 42 chr17 51538761 51538956 -37965597 + MLT1B LTR MaLR 1 193 -197 324 0 0 0 chr17 51538956 51538992 -37965561 + (CA)n Simple_repeat Simple_repeat 2 37 0 1536 184 49 42 chr17 51538992 51539181 -37965372 + MLT1B LTR MaLR 193 388 -2 367 236 35 2 chr17 51539595 51539696 -37964857 - MIR SINE MIR -68 140 30 545 221 53 87 chr17 51539911 51540119 -37964434 - MIR SINE MIR -5 257 57 432 256 51 0 chr17 51540127 51540244 -37964309 - MER5A DNA MER1_type -3 186 64 1339 154 10 0 chr17 51540244 51540463 -37964090 - AluJb SINE Alu 0 305 85 219 236 55 0 chr17 51540934 51540989 -37963564 + MIR SINE MIR 57 114 -148 * 357 204 369 17 chr17 51540974 51541150 -37963403 - MIR SINE MIR -15 247 10 2429 80 3 0 chr17 51542281 51542583 -37961970 - AluSx SINE Alu -6 306 4 2521 77 3 0 chr17 51543329 51543639 -37960914 - AluY SINE Alu 0 311 1 2415 92 0 3 chr17 51543755 51544058 -37960495 - AluSx SINE Alu -10 302 1 289 336 148 0 chr17 51544190 51544312 -37960241 - L2 LINE L2 0 3272 3133 983 107 0 0 chr17 51544334 51544465 -37960088 - AluSg/x SINE Alu -9 303 173 217 327 89 40 chr17 51544521 51544723 -37959830 - L2 LINE L2 -217 3055 2844 2057 118 3 0 chr17 51545282 51545579 -37958974 + AluY SINE Alu 1 298 -13 1110 236 41 0 chr17 51548727 51548973 -37955580 - MIR SINE MIR -4 258 3 248 222 236 42 chr17 51549973 51550046 -37954507 + MIR SINE MIR 91 149 -113 2498 51 0 0 chr17 51550046 51550342 -37954211 - AluY SINE Alu -15 296 1 248 222 236 42 chr17 51550342 51550412 -37954141 + MIR SINE MIR 149 262 0 2232 104 3 3 chr17 51550960 51551268 -37953285 - AluSx SINE Alu -4 308 1 1348 145 4 26 chr17 51551693 51551920 -37952633 + AluJo SINE Alu 85 306 -6 1588 189 0 11 chr17 51551974 51552289 -37952264 + AluJb SINE Alu 1 312 0 348 228 33 163 chr17 51554566 51554635 -37949918 + MER5A DNA MER1_type 1 77 -112 2457 68 0 3 chr17 51554635 51554944 -37949609 - AluY SINE Alu -3 308 1 348 228 33 163 chr17 51554944 51555026 -37949527 + MER5A DNA MER1_type 77 119 -70 2340 109 0 0 chr17 51555026 51555338 -37949215 - AluSq SINE Alu -1 312 1 348 228 33 163 chr17 51555338 51555400 -37949153 + MER5A DNA MER1_type 119 187 -2 331 281 37 0 chr17 51555426 51555508 -37949045 + L2 LINE L2 3188 3272 0 187 367 0 0 chr17 51556928 51556977 -37947576 - L2 LINE L2 -86 3186 3138 748 212 8 0 chr17 51557178 51557310 -37947243 - FLAM_A SINE Alu 0 133 1 1951 147 7 13 chr17 51557346 51557652 -37946901 + AluJb SINE Alu 1 304 -8 582 184 7 29 chr17 51557652 51557930 -37946623 + GA-rich Low_complexity Low_complexity 1 271 0 504 311 0 7 chr17 51558125 51558260 -37946293 - MIR3 SINE MIR -65 143 10 184 269 0 0 chr17 51558339 51558391 -37946162 + MIR SINE MIR 93 144 -118 2265 109 0 6 chr17 51559815 51560128 -37944425 + AluSx SINE Alu 1 311 -1 195 238 0 0 chr17 51560423 51560465 -37944088 + L2 LINE L2 3253 3294 -19 203 337 89 0 chr17 51560485 51560586 -37943967 + L3b LINE CR1 1291 1400 -183 * 506 184 31 10 chr17 51560583 51560681 -37943872 - L2 LINE L2 0 3313 3214 917 230 24 86 chr17 51561828 51562167 -37942386 - L1ME3A LINE L1 -4 6166 5849 348 257 18 37 chr17 51566071 51566180 -37938373 + MIR SINE MIR 24 130 -78 226 219 0 0 chr17 51566672 51566713 -37937840 + polypyrimidine Low_complexity Low_complexity 3 43 0 1852 145 6 25 chr17 51567167 51567485 -37937068 + AluJo SINE Alu 1 312 0 1269 118 0 31 chr17 51567592 51567787 -37936766 + AluSx SINE Alu 1 189 -123 1818 46 0 0 chr17 51567787 51568004 -37936549 + AluY SINE Alu 90 306 -5 1267 94 0 0 chr17 51568007 51568177 -37936376 + AluSp SINE Alu 141 310 -3 264 122 0 0 chr17 51568236 51568277 -37936276 + (TTCC)n Simple_repeat Simple_repeat 2 42 0 460 252 92 0 chr17 51568293 51568412 -37936141 - L2 LINE L2 0 3313 3184 217 224 35 0 chr17 51568435 51568493 -37936060 + L2 LINE L2 3252 3311 -2 1192 115 0 0 chr17 51569206 51569371 -37935182 - AluSg/x SINE Alu -8 304 140 1993 131 7 0 chr17 51569373 51569664 -37934889 - AluSx SINE Alu -11 301 9 2023 144 3 0 chr17 51569674 51569972 -37934581 - AluJo SINE Alu -13 299 1 2197 98 0 26 chr17 51569980 51570285 -37934268 - AluSx SINE Alu -15 297 1 288 0 0 0 chr17 51570984 51571016 -37933537 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 900 143 0 0 chr17 51571021 51571154 -37933399 - FLAM_C SINE Alu 0 133 1 371 326 80 78 chr17 51571224 51571734 -37932819 - L2 LINE L2 0 3272 2717 2066 136 7 0 chr17 51572661 51572970 -37931583 + AluSx SINE Alu 1 311 -1 196 349 0 0 chr17 51573126 51573189 -37931364 - L2 LINE L2 0 3313 3251 243 264 32 80 chr17 51574657 51574782 -37929771 + MIR SINE MIR 73 191 -71 260 276 0 0 chr17 51576639 51576697 -37927856 + L2 LINE L2 3251 3308 -5 384 290 124 24 chr17 51576864 51577033 -37927520 + MIR3 SINE MIR 8 193 -15 545 334 84 6 chr17 51577249 51577477 -37927076 + MIR SINE MIR 5 249 -13 351 300 75 17 chr17 51578634 51578754 -37925799 - MIR SINE MIR -65 143 17 253 329 105 21 chr17 51578810 51578953 -37925600 - MIR SINE MIR 0 262 108 232 378 0 0 chr17 51579933 51580052 -37924501 + G-rich Low_complexity Low_complexity 1 119 0 222 345 68 27 chr17 51582020 51582168 -37922385 + MIR3 SINE MIR 6 159 -49 274 165 0 129 chr17 51582169 51582254 -37922299 + MER5B DNA MER1_type 1 74 -104 218 204 23 0 chr17 51586014 51586058 -37918495 + (TG)n Simple_repeat Simple_repeat 2 46 0 2328 96 3 3 chr17 51588768 51589081 -37915472 - AluSp SINE Alu 0 313 1 1815 146 9 0 chr17 51589082 51589417 -37915136 + L1 LINE L1 4260 4597 -1549 181 335 85 43 chr17 51589513 51589701 -37914852 + MIR3 SINE MIR 6 201 -7 1716 179 0 10 chr17 51589753 51590061 -37914492 - AluJo SINE Alu -7 305 1 303 234 106 0 chr17 51591202 51591296 -37913257 + MIR SINE MIR 87 190 -72 210 204 19 19 chr17 51591962 51592016 -37912537 + MIR SINE MIR 69 122 -86 526 268 73 12 chr17 51592534 51592698 -37911855 + L2 LINE L2 3117 3290 -23 240 91 0 0 chr17 51595739 51595772 -37908781 - U2 snRNA snRNA -155 33 1 359 305 93 93 chr17 51596760 51597147 -37907406 + L3b LINE CR1 1175 1561 -22 183 111 56 0 chr17 51597739 51597775 -37906778 - L2 LINE L2 0 3272 3235 988 151 6 0 chr17 51597830 51597989 -37906564 + AluJb SINE Alu 143 302 -10 2215 97 10 10 chr17 51597989 51598298 -37906255 + AluSx SINE Alu 1 309 -3 243 162 15 29 chr17 51598342 51598410 -37906143 + GA-rich Low_complexity Low_complexity 1 67 0 312 234 143 78 chr17 51598456 51598610 -37905943 - L2 LINE L2 -174 3098 2935 354 228 13 0 chr17 51598643 51598722 -37905831 - MER5A DNA MER1_type -80 109 30 576 156 52 0 chr17 51598938 51599034 -37905519 + FLAM_A SINE Alu 33 133 -9 1392 181 38 11 chr17 51599037 51599303 -37905250 - AluJo SINE Alu -10 302 30 283 298 156 21 chr17 51600583 51600724 -37903829 + L2 LINE L2 3154 3313 0 517 243 39 124 chr17 51600724 51600932 -37903621 - MIR SINE MIR -18 244 61 2158 108 0 0 chr17 51600932 51601228 -37903325 + AluSx SINE Alu 1 296 -16 517 243 39 124 chr17 51601228 51601278 -37903275 - MIR SINE MIR -201 61 8 209 182 45 76 chr17 51601607 51601621 -37902932 + MER5A DNA MER1_type 1 12 -177 370 127 0 0 chr17 51601621 51601676 -37902877 - MER5A DNA MER1_type -2 187 133 260 182 0 18 chr17 51601678 51601733 -37902820 + AluJb SINE Alu 78 131 -171 609 169 13 117 chr17 51601736 51601813 -37902740 - MER5A DNA MER1_type -50 139 84 2060 123 6 25 chr17 51601813 51602130 -37902423 - AluSx SINE Alu 0 312 2 609 169 13 117 chr17 51602130 51602206 -37902347 - MER5A DNA MER1_type -105 84 2 476 244 113 6 chr17 51602238 51602398 -37902155 + MER58A DNA MER1_type 37 213 -11 195 129 0 0 chr17 51602413 51602444 -37902109 + (TC)n Simple_repeat Simple_repeat 1 31 0 2168 125 3 3 chr17 51602445 51602757 -37901796 - AluSx SINE Alu 0 312 1 2115 117 0 3 chr17 51603517 51603815 -37900738 - AluSg SINE Alu -13 297 1 2086 121 16 3 chr17 51603816 51604123 -37900430 - AluSx SINE Alu -1 311 1 2216 91 3 26 chr17 51605569 51605878 -37898675 - AluSx SINE Alu -8 304 3 917 129 79 6 chr17 51605927 51606105 -37898448 - L1MB3 LINE L1 -1 6182 5992 1408 196 14 4 chr17 51606116 51606391 -37898162 - AluJb SINE Alu -34 278 1 2256 101 0 0 chr17 51606394 51606691 -37897862 - AluSq SINE Alu -16 297 1 2379 88 0 0 chr17 51606700 51607006 -37897547 - AluSq SINE Alu -7 306 1 702 256 168 0 chr17 51607938 51608141 -37896412 - MIR SINE MIR -19 243 7 468 265 138 28 chr17 51612099 51612280 -37892273 + MIR SINE MIR 50 250 -12 2206 99 0 3 chr17 51614047 51614341 -37890212 + AluSq SINE Alu 1 293 -20 588 285 136 14 chr17 51615955 51616169 -37888384 + MIR SINE MIR 22 261 -1 297 258 32 32 chr17 51617481 51617574 -37886979 + MIR SINE MIR 58 150 -112 192 40 0 0 chr17 51619674 51619699 -37884854 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 200 221 41 57 chr17 51619856 51619978 -37884575 - L2 LINE L2 -1585 1729 1610 303 215 28 93 chr17 51621380 51621487 -37883066 + MER112 DNA MER1_type 1 100 -160 1011 96 0 60 chr17 51621674 51621840 -37882713 + AluSc SINE Alu 154 309 0 192 333 98 24 chr17 51621873 51621996 -37882557 + MIR SINE MIR 102 233 -29 1519 185 93 78 chr17 51624431 51624891 -37879662 + MLT1C LTR MaLR 1 467 0 2099 109 10 6 chr17 51625066 51625377 -37879176 - AluSp SINE Alu -1 312 1 204 231 39 77 chr17 51625667 51625745 -37878808 + MIR SINE MIR 62 136 -72 2265 110 0 0 chr17 51626255 51626565 -37877988 + AluSg SINE Alu 1 310 0 294 50 0 0 chr17 51627517 51627557 -37876996 + (TG)n Simple_repeat Simple_repeat 2 41 0 1565 164 27 47 chr17 51628487 51628785 -37875768 - AluJo SINE Alu -10 302 11 384 22 0 0 chr17 51629678 51629723 -37874830 + (TG)n Simple_repeat Simple_repeat 1 45 0 284 239 219 18 chr17 51630049 51630167 -37874386 + MIR3 SINE MIR 13 150 -70 536 288 50 11 chr17 51630998 51631276 -37873277 - L1M4 LINE L1 -2302 3844 3556 828 133 0 16 chr17 51631284 51631412 -37873141 + FLAM_C SINE Alu 17 142 -1 315 298 114 29 chr17 51631413 51631658 -37872895 - L1M4 LINE L1 -2599 3547 3282 663 193 9 0 chr17 51631859 51631973 -37872580 + FLAM_C SINE Alu 2 116 -27 2189 100 13 0 chr17 51631980 51632280 -37872273 - AluSg SINE Alu -6 304 1 516 238 72 99 chr17 51632308 51632628 -37871925 - HAL1 LINE L1 -29 2478 2168 2042 139 0 3 chr17 51632628 51632938 -37871615 + AluSx SINE Alu 1 309 -3 516 238 72 99 chr17 51632938 51632979 -37871574 - HAL1 LINE L1 -339 2168 2127 2240 118 86 12 chr17 51633896 51634235 -37870318 - THE1B LTR MaLR 0 364 1 2002 123 0 51 chr17 51634326 51634642 -37869911 - AluSx SINE Alu -12 300 1 2360 90 0 0 chr17 51634679 51634990 -37869563 + AluY SINE Alu 1 311 0 27 0 0 0 chr17 51635134 51635161 -37869392 + AT_rich Low_complexity Low_complexity 1 27 0 2464 67 3 0 chr17 51635386 51635698 -37868855 - AluSp SINE Alu 0 313 1 1118 281 63 37 chr17 51635999 51636757 -37867796 - L1MC5 LINE L1 -30 7931 7256 1850 139 0 0 chr17 51636768 51637035 -37867518 - AluJb SINE Alu -45 267 1 2080 99 3 3 chr17 51637554 51637861 -37866692 - AluSx SINE Alu 0 307 1 3194 191 53 45 chr17 51638059 51638504 -37866049 - L1ME1 LINE L1 -6 6160 5720 1746 145 32 3 chr17 51638504 51638786 -37865767 - AluJb SINE Alu -22 290 1 3194 191 53 45 chr17 51638786 51639525 -37865028 - L1ME1 LINE L1 -446 5720 4977 250 296 56 8 chr17 51639522 51639647 -37864906 - L1MEc LINE L1 -4530 1866 1736 * 2355 81 10 0 chr17 51639694 51640002 -37864551 + AluSx SINE Alu 1 311 -1 1124 268 77 18 chr17 51640036 51641174 -37863379 + HAL1 LINE L1 150 2065 -442 2582 39 0 3 chr17 51642080 51642392 -37862161 + AluY SINE Alu 1 311 0 414 149 21 53 chr17 51642497 51642591 -37861962 - L1M LINE L1 -760 5406 5316 * 2023 233 82 42 chr17 51642586 51643319 -37861234 - L1M4 LINE L1 -990 5156 4453 2067 107 3 7 chr17 51643319 51643633 -37860920 - AluSq SINE Alu 0 313 7 2023 233 82 42 chr17 51643633 51643651 -37860902 - L1M4 LINE L1 -1693 4453 4437 1058 104 6 0 chr17 51643659 51643822 -37860731 + (TTCC)n Simple_repeat Simple_repeat 2 165 0 1291 191 67 46 chr17 51643822 51644095 -37860458 - AluJb SINE Alu -20 282 1 2023 233 82 42 chr17 51644095 51644150 -37860403 - L1M4 LINE L1 -1709 4437 4317 985 111 0 0 chr17 51644152 51644287 -37860266 + AluSq/x SINE Alu 1 135 -178 2080 131 3 3 chr17 51644287 51644600 -37859953 + AluSq SINE Alu 1 313 0 512 281 41 27 chr17 51644827 51645048 -37859505 - L1M4 LINE L1 -2073 4073 3850 602 295 63 19 chr17 51645048 51645140 -37859413 - L1M4 LINE L1 -3186 2960 2873 1718 158 0 4 chr17 51645140 51645418 -37859135 - AluJo SINE Alu -35 277 1 602 295 63 19 chr17 51645418 51645532 -37859021 - L1M4 LINE L1 -3273 2873 2745 194 0 39 0 chr17 51645582 51645608 -37858945 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 327 25 0 0 chr17 51646569 51646609 -37857944 + (CA)n Simple_repeat Simple_repeat 2 41 0 627 158 0 138 chr17 51646880 51647001 -37857552 + FLAM_A SINE Alu 2 95 -236 2100 119 0 10 chr17 51647001 51647304 -37857249 - AluSx SINE Alu -12 300 1 627 158 0 138 chr17 51647304 51647364 -37857189 + FLAM_A SINE Alu 95 162 -169 544 231 39 15 chr17 51648220 51648350 -37856203 + FLAM_A SINE Alu 1 133 0 1603 142 109 0 chr17 51648371 51648638 -37855915 + AluSg SINE Alu 1 296 -14 1611 163 11 65 chr17 51648857 51648941 -37855612 - L1MD2 LINE L1 -456 5903 5816 342 0 0 0 chr17 51648941 51648979 -37855574 + (TG)n Simple_repeat Simple_repeat 2 39 0 1973 146 0 0 chr17 51648985 51649294 -37855259 - AluSx SINE Alu 0 312 4 1611 163 11 65 chr17 51649294 51649557 -37854996 - L1MD2 LINE L1 -548 5811 5568 295 321 123 5 chr17 51649825 51650024 -37854529 + MIR SINE MIR 23 248 -14 2301 104 0 0 chr17 51651135 51651444 -37853109 - AluSx SINE Alu -3 309 1 568 320 26 11 chr17 51651734 51652003 -37852550 + L1ME4a LINE L1 5601 5873 -248 1982 139 0 13 chr17 51652010 51652326 -37852227 - AluJo SINE Alu 0 312 1 342 245 56 91 chr17 51652351 51652494 -37852059 + L1ME4a LINE L1 5984 6121 0 2774 55 9 0 chr17 51652565 51652909 -37851644 + L1PA6 LINE L1 5808 6154 0 294 170 283 28 chr17 51653983 51654089 -37850464 - MIR3 SINE MIR -69 139 7 2068 109 84 0 chr17 51655003 51655324 -37849229 + MER7A DNA MER2_type 1 346 0 671 193 210 6 chr17 51655478 51655654 -37848899 - MIR SINE MIR -49 213 2 225 351 44 60 chr17 51656195 51656443 -37848110 - L2 LINE L2 -51 3221 2978 1073 262 57 84 chr17 51656765 51657345 -37847208 - MLT1K LTR MaLR -2 586 23 1087 95 0 0 chr17 51657374 51657522 -37847031 + AluSg/x SINE Alu 154 301 -8 343 326 74 98 chr17 51657527 51657647 -37846906 - L2 LINE L2 -29 3243 3122 2044 113 14 0 chr17 51657647 51657940 -37846613 + AluSq SINE Alu 1 297 -16 343 326 74 98 chr17 51657940 51658144 -37846409 - L2 LINE L2 -150 3122 2927 352 337 48 37 chr17 51658160 51658430 -37846123 - L2 LINE L2 -866 2448 2176 1016 131 6 12 chr17 51658703 51658863 -37845690 + FRAM SINE Alu 1 158 -18 1761 169 7 0 chr17 51658912 51659213 -37845340 + AluSx SINE Alu 1 303 -9 1892 153 3 16 chr17 51659225 51659532 -37845021 + AluJb SINE Alu 1 303 -9 502 214 34 26 chr17 51659532 51659674 -37844879 + MLT1J LTR MaLR 73 212 -299 2336 84 0 0 chr17 51659674 51659972 -37844581 + AluSg SINE Alu 1 298 -12 502 214 34 26 chr17 51659972 51660158 -37844395 + MLT1J LTR MaLR 212 509 -2 346 177 0 0 chr17 51660170 51660232 -37844321 + HAL1 LINE L1 1590 1651 -856 21 57 0 0 chr17 51660264 51660299 -37844254 + AT_rich Low_complexity Low_complexity 1 35 0 347 284 30 51 chr17 51660339 51660536 -37844017 + HAL1 LINE L1 2226 2418 -89 1966 137 0 7 chr17 51660748 51661048 -37843505 + AluSx SINE Alu 1 298 -14 418 320 114 23 chr17 51661644 51661863 -37842690 + MLT1K LTR MaLR 65 303 -285 308 319 128 57 chr17 51662472 51662895 -37841658 - MLT1K LTR MaLR 0 588 136 500 317 49 69 chr17 51662945 51663244 -37841309 + L1 LINE L1 4260 4550 -1596 1992 131 3 0 chr17 51663244 51663535 -37841018 + AluSx SINE Alu 1 292 -20 500 317 49 69 chr17 51663535 51663642 -37840911 + L1 LINE L1 4550 4658 -1488 2070 97 3 13 chr17 51663670 51663968 -37840585 - AluSc SINE Alu -14 295 1 3278 129 33 6 chr17 51663989 51664468 -37840085 + MER1A DNA MER1_type 37 528 -1 2658 223 82 32 chr17 51664468 51665350 -37839203 + L1MDa LINE L1 351 1573 -4967 1583 149 3 32 chr17 51665359 51665641 -37838912 + AluSx SINE Alu 1 274 -38 207 0 0 0 chr17 51665681 51665704 -37838849 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 465 220 10 10 chr17 51665712 51665812 -37838741 + AluJ/FLAM SINE Alu 2 101 -211 1517 158 26 15 chr17 51665812 51666085 -37838468 + AluSx SINE Alu 21 296 -16 4826 162 57 19 chr17 51666085 51666747 -37837806 + L1MDa LINE L1 1563 2281 -4259 1643 141 0 95 chr17 51666747 51667074 -37837479 - AluSq SINE Alu -17 296 1 4826 162 57 19 chr17 51667074 51667459 -37837094 + L1MDa LINE L1 2281 2650 -3890 745 111 0 0 chr17 51667459 51667558 -37836995 - Tigger7 DNA MER2_type 0 2491 2393 * 1116 185 134 21 chr17 51667556 51667794 -37836759 - Tigger7 DNA MER2_type -2220 267 3 3289 214 70 74 chr17 51667803 51667910 -37836643 + L1MDa LINE L1 2654 2760 -3780 1801 179 0 0 chr17 51667910 51668211 -37836342 - AluSx SINE Alu -10 302 2 3289 214 70 74 chr17 51668211 51668483 -37836070 + L1MDa LINE L1 2760 3032 -3508 1771 136 63 0 chr17 51668483 51668769 -37835784 + AluSg SINE Alu 1 304 -6 3289 214 70 74 chr17 51668769 51668902 -37835651 + L1MDa LINE L1 3032 3164 -3376 2162 109 0 0 chr17 51668902 51669196 -37835357 - AluSx SINE Alu -18 294 1 3289 214 70 74 chr17 51669196 51669439 -37835114 + L1MDa LINE L1 3164 3407 -3133 1647 201 0 0 chr17 51669439 51669743 -37834810 - AluSx SINE Alu -8 304 1 3289 214 70 74 chr17 51669743 51669790 -37834763 + L1MDa LINE L1 3407 3453 -3087 2058 125 20 0 chr17 51669790 51670094 -37834459 + AluSx SINE Alu 1 310 -2 3289 214 70 74 chr17 51670094 51670602 -37833951 + L1MDa LINE L1 3453 3964 -2576 1882 151 0 13 chr17 51670602 51670906 -37833647 + AluJb SINE Alu 1 300 -12 3289 214 70 74 chr17 51670906 51670975 -37833578 + L1MDa LINE L1 3964 4032 -2508 730 213 106 26 chr17 51671056 51671372 -37833181 + L1MDa LINE L1 2550 2896 -3644 * 1061 171 61 18 chr17 51671366 51671594 -37832959 + L1MD1 LINE L1 5956 6193 -49 1166 166 0 0 chr17 51671613 51671800 -37832753 - AluSg/x SINE Alu -22 288 102 362 109 0 0 chr17 51671807 51671853 -37832700 - Alu SINE Alu -254 47 2 414 101 0 0 chr17 51671853 51671922 -37832631 + L1MD1 LINE L1 6174 6242 0 380 209 0 0 chr17 51672452 51672519 -37832034 + Tigger2 DNA MER2_type 6 72 -2646 * 2644 125 29 7 chr17 51672505 51672913 -37831640 + Tigger2 DNA MER2_type 2273 2689 -29 492 308 98 25 chr17 51672980 51673428 -37831125 + L1MC4 LINE L1 7492 7972 -70 2363 79 0 0 chr17 51675025 51675329 -37829224 - AluY SINE Alu -7 304 1 444 123 0 0 chr17 51675525 51675590 -37828963 - HY4 scRNA scRNA -28 65 1 353 282 69 119 chr17 51675792 51675872 -37828681 + HAL1b LINE L1 50 132 -1216 1863 161 0 7 chr17 51675872 51676177 -37828376 + AluJb SINE Alu 1 303 -9 2262 84 0 31 chr17 51676178 51676498 -37828055 + AluY SINE Alu 2 311 0 353 282 69 119 chr17 51676498 51676710 -37827843 + HAL1b LINE L1 131 302 -1046 2295 79 0 0 chr17 51676730 51677022 -37827531 + AluSg SINE Alu 1 292 -18 631 308 74 58 chr17 51677035 51677633 -37826920 + HAL1 LINE L1 64 670 -1837 442 110 0 0 chr17 51677751 51677824 -37826729 + FLAM_C SINE Alu 71 143 0 730 215 86 142 chr17 51677853 51677864 -37826689 + HAL1 LINE L1 1268 1278 -1229 2011 119 3 0 chr17 51677864 51678149 -37826404 - AluSx SINE Alu -17 295 10 730 215 86 142 chr17 51678149 51678410 -37826143 + HAL1 LINE L1 1278 1514 -993 1923 134 0 13 chr17 51678410 51678709 -37825844 + AluSx SINE Alu 1 295 -17 730 215 86 142 chr17 51678709 51678830 -37825723 + HAL1 LINE L1 1514 1640 -867 1622 142 14 37 chr17 51679078 51679373 -37825180 + AluJo SINE Alu 13 300 -12 463 307 65 22 chr17 51679374 51679707 -37824846 + L1ME3A LINE L1 1265 1582 -4981 2008 119 0 52 chr17 51679707 51680034 -37824519 + AluSx SINE Alu 1 310 -2 463 307 65 22 chr17 51680034 51680252 -37824301 + L1ME3A LINE L1 1582 1979 -4584 1353 202 0 57 chr17 51680647 51680944 -37823609 + AluJo SINE Alu 1 280 -32 249 289 0 0 chr17 51680999 51681082 -37823471 + L1ME3A LINE L1 4356 4438 -1944 1330 84 0 0 chr17 51681083 51681261 -37823292 - AluY SINE Alu -1 310 133 852 276 184 19 chr17 51681261 51682021 -37822532 + L1ME3A LINE L1 4432 5422 -970 1617 192 17 0 chr17 51682021 51682323 -37822230 + AluJo SINE Alu 1 307 -5 852 276 184 19 chr17 51682323 51682604 -37821949 + L1ME3A LINE L1 5422 5655 -737 592 246 124 67 chr17 51682623 51683026 -37821527 + L1ME3A LINE L1 5761 6186 -220 904 146 0 0 chr17 51683087 51683217 -37821336 + FLAM_C SINE Alu 1 130 -3 198 0 0 0 chr17 51683878 51683900 -37820653 + (A)n Simple_repeat Simple_repeat 1 22 0 567 230 8 89 chr17 51683998 51684080 -37820473 + HAL1b LINE L1 927 1014 -334 2194 86 3 7 chr17 51684080 51684381 -37820172 + AluSc SINE Alu 3 302 -7 567 230 8 89 chr17 51684381 51684468 -37820085 + HAL1b LINE L1 1014 1071 -277 288 0 0 0 chr17 51684468 51684500 -37820053 + (TG)n Simple_repeat Simple_repeat 1 32 0 567 230 8 89 chr17 51684500 51684586 -37819967 + HAL1b LINE L1 1071 1162 -186 325 262 58 0 chr17 51684591 51684694 -37819859 + HAL1b LINE L1 1227 1335 -13 2181 113 0 0 chr17 51684695 51684995 -37819558 + AluSq SINE Alu 1 300 -13 283 215 31 15 chr17 51685066 51685131 -37819422 - MIR SINE MIR 0 262 197 435 153 28 0 chr17 51685131 51685203 -37819350 + MER116 DNA Mariner 1 74 -6 183 129 0 0 chr17 51685706 51685737 -37818816 + (A)n Simple_repeat Simple_repeat 1 31 0 2333 97 0 0 chr17 51687826 51688136 -37816417 - AluSg SINE Alu 0 310 1 1715 234 58 7 chr17 51689206 51689354 -37815199 - MER63B DNA MER1_type -626 436 297 2119 95 0 43 chr17 51689354 51689681 -37814872 + AluSq SINE Alu 1 313 0 1715 234 58 7 chr17 51689681 51689947 -37814606 - MER63B DNA MER1_type -765 297 1 409 232 0 9 chr17 51690386 51690624 -37813929 + (CCA)n Simple_repeat Simple_repeat 1 235 0 199 185 25 123 chr17 51690949 51690997 -37813556 + MIR SINE MIR 74 112 -150 1922 139 14 0 chr17 51690997 51691284 -37813269 - AluSx SINE Alu -21 291 1 199 185 25 123 chr17 51691284 51691316 -37813237 + MIR SINE MIR 112 146 -116 2030 118 0 7 chr17 51691368 51691674 -37812879 + AluSx SINE Alu 1 304 -8 224 245 226 9 chr17 51691674 51691780 -37812773 - MIR SINE MIR -111 151 23 1108 214 84 28 chr17 51691811 51691958 -37812595 - AluJo SINE Alu 0 302 165 2199 80 0 13 chr17 51691958 51692260 -37812293 - AluSx SINE Alu -14 298 1 1108 214 84 28 chr17 51692260 51692397 -37812156 - AluJo SINE Alu -137 165 2 530 249 45 85 chr17 51692746 51692836 -37811717 + L1ME LINE L1 5396 5488 -633 2274 91 0 0 chr17 51692836 51693132 -37811421 + AluSx SINE Alu 1 296 -16 530 249 45 85 chr17 51693132 51693242 -37811311 + L1ME LINE L1 5488 5588 -533 1329 129 0 19 chr17 51693363 51693573 -37810980 + AluJo SINE Alu 86 291 -21 790 161 15 15 chr17 51693653 51693790 -37810763 + FLAM_C SINE Alu 1 137 -6 2167 95 3 0 chr17 51693812 51694106 -37810447 + AluSx SINE Alu 1 295 -17 382 226 158 60 chr17 51695290 51695556 -37808997 + L1MC5 LINE L1 7634 7925 -36 244 327 9 36 chr17 51695912 51696022 -37808531 + MIR SINE MIR 63 169 -93 452 254 65 29 chr17 51696134 51696272 -37808281 + MIR3 SINE MIR 47 189 -19 600 40 0 0 chr17 51697101 51697176 -37807377 + (CA)n Simple_repeat Simple_repeat 1 75 0 261 83 0 0 chr17 51697265 51697301 -37807252 + (CCA)n Simple_repeat Simple_repeat 3 38 0 257 214 18 0 chr17 51698532 51698588 -37805965 + (CCCCG)n Simple_repeat Simple_repeat 2 58 0 276 312 0 72 chr17 51698718 51698856 -37805697 + L2 LINE L2 2954 3081 -191 228 222 19 19 chr17 51698908 51698962 -37805591 - L2 LINE L2 -7 3306 3253 358 355 5 65 chr17 51699165 51699382 -37805171 + MIR SINE MIR 9 212 -50 331 283 41 7 chr17 51699620 51699765 -37804788 - HAL1b LINE L1 -7 1341 1192 421 200 0 12 chr17 51701183 51701263 -37803290 - MIR SINE MIR -113 95 17 2130 121 10 0 chr17 51701310 51701617 -37802936 + AluSx SINE Alu 1 310 -2 1136 136 6 0 chr17 51701617 51701794 -37802759 + AluSg/x SINE Alu 132 309 -1 284 284 34 0 chr17 51701999 51702087 -37802466 - MER5A DNA MER1_type -58 131 41 2086 87 0 14 chr17 51702426 51702741 -37801812 - AluSg SINE Alu 0 311 1 255 280 88 34 chr17 51703103 51703236 -37801317 + MIR SINE MIR 15 148 -63 195 323 86 0 chr17 51703534 51703627 -37800926 - L2 LINE L2 -24 3248 3148 247 231 34 26 chr17 51704962 51705079 -37799474 + (TCTCTG)n Simple_repeat Simple_repeat 3 120 0 359 269 67 8 chr17 51705538 51705657 -37798896 + MIR SINE MIR 48 173 -89 219 287 35 35 chr17 51706901 51706988 -37797565 - L3b LINE CR1 -200 1383 1297 2055 120 13 10 chr17 51707883 51708184 -37796369 + AluSx SINE Alu 1 302 -10 249 196 0 0 chr17 51708211 51708262 -37796291 + CT-rich Low_complexity Low_complexity 2 52 0 291 200 50 0 chr17 51708324 51708384 -37796169 - MIR SINE MIR -99 163 101 2184 93 3 0 chr17 51708386 51708676 -37795877 + AluSc SINE Alu 1 291 -18 2064 131 3 0 chr17 51708686 51708983 -37795570 + AluSx SINE Alu 1 298 -14 322 325 40 8 chr17 51709022 51709148 -37795405 - MIR SINE MIR -49 213 84 238 254 0 0 chr17 51711258 51711313 -37793240 + GA-rich Low_complexity Low_complexity 2 56 0 261 199 15 44 chr17 51712423 51712559 -37791994 + CT-rich Low_complexity Low_complexity 4 135 0 180 268 36 0 chr17 51712754 51712810 -37791743 - MIR3 SINE MIR 0 208 151 377 167 69 0 chr17 51713437 51713509 -37791044 - MER63A DNA MER1_type -1 209 133 274 81 0 0 chr17 51713527 51713564 -37790989 - MER63A DNA MER1_type -173 37 1 194 318 0 16 chr17 51714915 51714978 -37789575 - L3b LINE CR1 -198 1385 1324 215 361 90 19 chr17 51717464 51717619 -37786934 - L3b LINE CR1 -205 1378 1213 200 35 35 0 chr17 51720453 51720482 -37784071 + (TCTCC)n Simple_repeat Simple_repeat 4 33 0 1395 69 6 0 chr17 51721560 51721733 -37782820 - AluSp SINE Alu -139 174 1 1868 147 3 31 chr17 51722686 51723005 -37781548 + AluSx SINE Alu 1 310 -2 2174 112 3 0 chr17 51727170 51727465 -37777088 + AluSp SINE Alu 1 296 -17 289 293 20 40 chr17 51728034 51728133 -37776420 - MIR SINE MIR -28 234 138 1652 231 95 28 chr17 51728164 51728636 -37775917 - MLT1D LTR MaLR 0 505 2 343 343 96 0 chr17 51728664 51729018 -37775535 + LTR16A LTR ERVL 3 406 -44 2037 128 0 0 chr17 51729109 51729398 -37775155 - AluSx SINE Alu -18 294 6 1124 201 158 36 chr17 51729439 51729775 -37774778 + MLT1C LTR MaLR 1 397 -70 2314 70 7 7 chr17 51729775 51730076 -37774477 - AluY SINE Alu -10 301 1 1124 201 158 36 chr17 51730076 51730151 -37774402 + MLT1C LTR MaLR 397 462 -5 228 182 0 0 chr17 51730217 51730261 -37774292 + CT-rich Low_complexity Low_complexity 4 47 0 943 135 0 0 chr17 51730263 51730396 -37774157 - FLAM_C SINE Alu 0 133 1 753 163 0 8 chr17 51730520 51730649 -37773904 - FRAM SINE Alu 0 40 1 236 271 70 101 chr17 51730711 51731005 -37773548 + L2 LINE L2 2767 3052 -220 1964 102 7 32 chr17 51731116 51731399 -37773154 - AluSx SINE Alu -15 297 22 355 319 22 36 chr17 51732130 51732268 -37772285 - L2 LINE L2 -1 3271 3136 2362 101 0 0 chr17 51732283 51732591 -37771962 + AluSg SINE Alu 2 309 -1 229 369 0 12 chr17 51733034 51733118 -37771435 + MIR SINE MIR 6 88 -174 1988 105 34 0 chr17 51733118 51733412 -37771141 - AluSx SINE Alu -8 304 1 2352 87 0 6 chr17 51733437 51733748 -37770805 - AluSc SINE Alu 0 309 1 396 313 48 7 chr17 51733750 51733897 -37770656 + MIR SINE MIR 81 233 -29 1803 108 0 89 chr17 51734844 51735021 -37769532 - AluSx SINE Alu -26 286 148 2394 91 0 0 chr17 51735021 51735330 -37769223 - AluSg SINE Alu 0 310 2 1803 108 0 89 chr17 51735330 51735466 -37769087 - AluSx SINE Alu -164 148 1 246 287 108 39 chr17 51735532 51735661 -37768892 - MIR SINE MIR -42 220 83 2523 55 0 3 chr17 51735790 51736102 -37768451 + AluY SINE Alu 1 311 0 589 316 144 41 chr17 51736108 51736789 -37767764 + L2 LINE L2 2112 2862 -452 421 198 0 0 chr17 51736834 51736920 -37767633 + MER45A DNA AcHobo 93 178 0 2086 86 0 77 chr17 51738201 51738525 -37766028 + AluSp SINE Alu 2 300 -13 191 293 40 13 chr17 51738529 51738604 -37765949 - MIR SINE MIR -179 83 7 254 238 0 32 chr17 51739162 51739225 -37765328 - MIR SINE MIR -3 259 199 422 250 245 15 chr17 51739230 51739430 -37765123 - MIR SINE MIR 0 262 17 442 328 115 0 chr17 51741385 51741568 -37762985 - MIR SINE MIR 0 262 59 1643 180 3 17 chr17 51742883 51743178 -37761375 - AluJb SINE Alu -21 291 1 2110 101 14 10 chr17 51743490 51743655 -37760898 - AluSx SINE Alu -14 298 130 2430 55 3 3 chr17 51743655 51743962 -37760591 - AluY SINE Alu -4 307 1 2110 101 14 10 chr17 51743962 51744093 -37760460 - AluSx SINE Alu -182 130 1 2275 86 3 3 chr17 51744584 51744886 -37759667 - AluSp SINE Alu -11 302 1 1478 271 108 6 chr17 51745586 51746170 -37758383 - L2 LINE L2 -4 3309 2673 1745 169 19 3 chr17 51746776 51747083 -37757470 - AluJo SINE Alu 0 312 1 305 289 10 39 chr17 51750099 51750203 -37754350 + MIR SINE MIR 162 262 0 1711 97 144 0 chr17 51751138 51751395 -37753158 - AluSq SINE Alu -9 294 1 2159 112 7 0 chr17 51751400 51751703 -37752850 - AluSg SINE Alu -4 306 2 853 155 0 0 chr17 51751712 51751841 -37752712 - FLAM_C SINE Alu -4 129 1 524 247 137 31 chr17 51751934 51752124 -37752429 + MIR SINE MIR 3 222 -40 2264 88 3 3 chr17 51752124 51752430 -37752123 + AluSq SINE Alu 1 306 -7 524 247 137 31 chr17 51752430 51752466 -37752087 + MIR SINE MIR 222 253 -9 2004 106 39 0 chr17 51752521 51752805 -37751748 + AluSg SINE Alu 1 295 -15 751 43 11 0 chr17 51753557 51753651 -37750902 + AluJ/FLAM SINE Alu 2 96 -216 1868 144 13 3 chr17 51754713 51755012 -37749541 + AluJo SINE Alu 1 302 -10 977 105 0 0 chr17 51755022 51755155 -37749398 + AluSq/x SINE Alu 1 133 -180 590 147 88 0 chr17 51755586 51755688 -37748865 - L1MB3 LINE L1 -9 6174 6064 2248 90 7 0 chr17 51756758 51757059 -37747494 - AluSx SINE Alu -9 303 1 546 305 139 14 chr17 51757319 51757542 -37747011 + L3 LINE CR1 1293 1543 -34 300 289 0 21 chr17 51757833 51757930 -37746623 + CT-rich Low_complexity Low_complexity 3 97 0 1983 156 0 0 chr17 51758497 51758805 -37745748 + AluSg SINE Alu 1 308 -2 252 306 241 18 chr17 51758853 51759023 -37745530 + MIR SINE MIR 36 243 -19 232 357 0 0 chr17 51759225 51759309 -37745244 + MIR SINE MIR 167 250 -12 185 32 0 65 chr17 51759309 51759340 -37745213 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1919 147 0 3 chr17 51760172 51760478 -37744075 - AluJb SINE Alu -4 308 4 535 283 117 14 chr17 51760519 51760742 -37743811 - MIR SINE MIR -15 247 2 340 349 128 0 chr17 51762218 51762413 -37742140 - MIR SINE MIR -36 226 7 2255 68 0 14 chr17 51763509 51763832 -37740721 - AluY SINE Alu 0 311 2 2186 102 0 3 chr17 51763864 51764167 -37740386 + AluSq SINE Alu 1 302 -11 318 291 164 8 chr17 51764175 51764309 -37740244 - MIR3 SINE MIR -52 156 2 279 277 75 0 chr17 51764776 51764890 -37739663 + MIR SINE MIR 33 155 -67 2210 87 7 17 chr17 51764904 51765204 -37739349 - AluSx SINE Alu -15 297 1 1994 141 0 3 chr17 51765231 51765535 -37739018 + AluJb SINE Alu 1 303 -9 798 255 44 15 chr17 51765542 51765746 -37738807 - MER63A DNA MER1_type 0 210 1 1824 120 52 0 chr17 51765784 51766090 -37738463 + AluSx SINE Alu 1 320 0 2133 72 55 3 chr17 51767124 51767414 -37737139 + AluY SINE Alu 1 305 -6 2282 78 0 16 chr17 51767416 51767747 -37736806 + AluY SINE Alu 1 311 0 189 0 0 0 chr17 51767958 51767979 -37736574 + (A)n Simple_repeat Simple_repeat 1 21 0 354 358 46 17 chr17 51768095 51768240 -37736313 - L2 LINE L2 0 3272 3120 1835 143 0 20 chr17 51768240 51768540 -37736013 + AluJb SINE Alu 11 304 -8 354 358 46 17 chr17 51768540 51768567 -37735986 - L2 LINE L2 -152 3120 3095 1444 175 53 4 chr17 51768619 51768738 -37735815 + AluJb SINE Alu 1 113 -199 234 0 0 0 chr17 51768738 51768764 -37735789 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1444 175 53 4 chr17 51768764 51768907 -37735646 + AluJb SINE Alu 113 276 -36 263 106 43 0 chr17 51768911 51768958 -37735595 + GA-rich Low_complexity Low_complexity 1 49 0 215 245 19 0 chr17 51770658 51770711 -37733842 + CT-rich Low_complexity Low_complexity 3 56 0 654 286 48 0 chr17 51770851 51771057 -37733496 - MIR SINE MIR -12 250 35 1332 152 14 5 chr17 51771081 51771298 -37733255 + AluJb SINE Alu 1 219 -93 2232 104 0 19 chr17 51772122 51772440 -37732113 - AluSx SINE Alu 0 312 1 1966 143 10 0 chr17 51772440 51772741 -37731812 - AluSx SINE Alu -7 305 2 243 0 0 0 chr17 51772985 51773012 -37731541 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1146 299 68 100 chr17 51773022 51773205 -37731348 - L3 LINE CR1 -1 1576 1389 2397 71 0 0 chr17 51773205 51773516 -37731037 - AluY SINE Alu 0 311 1 1146 299 68 100 chr17 51773516 51773938 -37730615 - L3 LINE CR1 -188 1389 1011 1826 115 52 0 chr17 51773938 51774225 -37730328 - AluSx SINE Alu -10 302 1 1146 299 68 100 chr17 51774225 51774599 -37729954 - L3 LINE CR1 -566 1011 627 2244 94 0 28 chr17 51774633 51774953 -37729600 + AluY SINE Alu 1 311 0 1518 222 2 56 chr17 51775014 51775460 -37729093 - L1MC4 LINE L1 0 8042 7621 391 244 6 125 chr17 51775460 51775620 -37728933 - MARNA DNA Mariner -108 478 338 2228 100 0 0 chr17 51775690 51775989 -37728564 - AluSx SINE Alu -13 299 1 1155 164 36 0 chr17 51776023 51776242 -37728311 - AluJo SINE Alu -2 310 84 757 184 0 0 chr17 51776246 51776371 -37728182 - FLAM_A SINE Alu -8 134 10 920 286 12 4 chr17 51776812 51777067 -37727486 - MIR SINE MIR 0 262 6 2102 119 0 3 chr17 51777194 51777497 -37727056 - AluSx SINE Alu -6 306 5 228 135 0 0 chr17 51777642 51777679 -37726874 + (T)n Simple_repeat Simple_repeat 1 37 0 478 233 75 15 chr17 51780241 51780374 -37724179 - MIR3 SINE MIR -7 201 61 2012 120 10 0 chr17 51781991 51782282 -37722271 - AluSx SINE Alu -14 298 5 37 0 0 0 chr17 51782345 51782382 -37722171 + AT_rich Low_complexity Low_complexity 1 37 0 332 91 0 0 chr17 51782391 51782435 -37722118 - Alu SINE Alu -257 44 1 709 165 16 0 chr17 51782435 51782556 -37721997 - AluSg/x SINE Alu -15 295 173 270 0 0 0 chr17 51782631 51782661 -37721892 + (T)n Simple_repeat Simple_repeat 1 30 0 1878 152 3 0 chr17 51783396 51783737 -37720816 + AluSx SINE Alu 2 312 0 1845 133 14 0 chr17 51783762 51784040 -37720513 + AluSx SINE Alu 29 310 -2 385 267 50 33 chr17 51784159 51784279 -37720274 + MIR3 SINE MIR 15 136 -72 2125 128 0 0 chr17 51784438 51784742 -37719811 - AluSx SINE Alu -8 304 1 2116 86 4 4 chr17 51785146 51785445 -37719108 - AluSg SINE Alu 0 299 1 508 140 8 1 chr17 51785834 51786091 -37718462 + AluJo SINE Alu 9 299 -13 1570 162 0 45 chr17 51786091 51786405 -37718148 + AluJb SINE Alu 1 300 -12 2241 77 6 49 chr17 51786571 51786898 -37717655 - AluSq SINE Alu 0 313 1 226 292 42 0 chr17 51786906 51786978 -37717575 - MARNA DNA Mariner -41 545 471 515 230 184 0 chr17 51787024 51787176 -37717377 - MARNA DNA Mariner -225 361 182 277 343 30 0 chr17 51787215 51787314 -37717239 + L2 LINE L2 2687 2788 -526 2008 98 32 0 chr17 51787319 51787620 -37716933 - AluSp SINE Alu 0 310 1 289 256 166 16 chr17 51787642 51787767 -37716786 + MIR SINE MIR 9 147 -61 1256 156 0 15 chr17 51787789 51787994 -37716559 + AluJb SINE Alu 30 231 -81 1844 152 0 49 chr17 51788229 51788557 -37715996 - AluJb SINE Alu 0 312 1 333 333 13 33 chr17 51788683 51788833 -37715720 + L2 LINE L2 3122 3268 -4 22 0 0 0 chr17 51788847 51788869 -37715684 + AT_rich Low_complexity Low_complexity 1 22 0 322 198 142 0 chr17 51789091 51789156 -37715397 - L1ME3 LINE L1 0 6162 6108 2337 70 7 3 chr17 51789156 51789456 -37715097 - AluSq SINE Alu -12 301 1 322 198 142 0 chr17 51789456 51789496 -37715057 - L1ME3 LINE L1 -54 6108 6042 194 152 130 0 chr17 51789610 51789656 -37714897 + L2 LINE L2 3221 3272 0 180 0 0 0 chr17 51792650 51792670 -37711883 + (CA)n Simple_repeat Simple_repeat 2 21 0 519 287 134 22 chr17 51793840 51794063 -37710490 - MIR SINE MIR -7 255 8 21 0 0 31 chr17 51796200 51796217 -37708336 + AT_rich Low_complexity Low_complexity 1 18 -13 2124 103 3 0 chr17 51796217 51796509 -37708044 + AluSx SINE Alu 1 293 -19 21 0 0 31 chr17 51796509 51796523 -37708030 + AT_rich Low_complexity Low_complexity 18 31 0 2174 102 0 10 chr17 51796534 51796820 -37707733 + AluSg SINE Alu 1 285 -25 369 0 0 0 chr17 51796820 51796861 -37707692 + (CA)n Simple_repeat Simple_repeat 2 42 0 2174 102 0 10 chr17 51796861 51796879 -37707674 + AluSg SINE Alu 285 302 -8 640 232 33 66 chr17 51797272 51797453 -37707100 + MER69A DNA AcHobo 1 175 -2 419 276 40 26 chr17 51797510 51797662 -37706891 + MIR SINE MIR 2 155 -107 2522 69 0 13 chr17 51797701 51798006 -37706547 + AluY SINE Alu 1 301 -10 321 224 139 58 chr17 51798168 51798306 -37706247 - MIR SINE MIR -54 208 61 2331 89 10 0 chr17 51800645 51800936 -37703617 - AluSp SINE Alu -19 294 1 408 180 29 101 chr17 51801170 51801231 -37703322 - MIR SINE MIR -102 160 96 2286 91 0 10 chr17 51801231 51801529 -37703024 + AluSx SINE Alu 1 295 -17 408 180 29 101 chr17 51801529 51801606 -37702947 - MIR SINE MIR -166 96 32 1829 123 3 92 chr17 51801938 51802254 -37702299 - AluJb SINE Alu -24 288 1 2605 77 0 3 chr17 51802273 51802585 -37701968 - AluSq SINE Alu -2 311 1 24 32 0 0 chr17 51802805 51802836 -37701717 + AT_rich Low_complexity Low_complexity 1 31 0 409 304 9 0 chr17 51802865 51802980 -37701573 + MIR3 SINE MIR 85 200 -8 31 44 0 0 chr17 51804228 51804273 -37700280 + GC_rich Low_complexity Low_complexity 1 45 0 226 151 43 43 chr17 51804294 51804387 -37700166 + (CCG)n Simple_repeat Simple_repeat 2 94 0 * 229 314 29 29 chr17 51804329 51804504 -37700049 + C-rich Low_complexity Low_complexity 2 176 0 * 294 309 11 0 chr17 51804423 51804517 -37700036 + CT-rich Low_complexity Low_complexity 1 95 0 274 281 153 6 chr17 51805098 51805267 -37699286 - MIR3 SINE MIR -55 207 15 1096 149 6 0 chr17 51805513 51805681 -37698872 - AluJ SINE Alu -24 288 120 1765 188 10 10 chr17 51805717 51806026 -37698527 + AluJo SINE Alu 3 311 -1 201 74 0 0 chr17 51806037 51806064 -37698489 + (GGA)n Simple_repeat Simple_repeat 3 29 0 726 136 9 0 chr17 51806075 51806185 -37698368 - AluJ SINE Alu -200 112 2 314 323 6 102 chr17 51806195 51806259 -37698294 + L2 LINE L2 3122 3191 -81 1706 165 0 75 chr17 51806259 51806366 -37698187 - AluJo SINE Alu -4 308 195 2147 84 0 7 chr17 51806366 51806639 -37697914 + AluSg SINE Alu 1 271 -39 192 111 0 0 chr17 51806649 51806685 -37697868 + (CA)n Simple_repeat Simple_repeat 1 36 0 1706 165 0 75 chr17 51806685 51806899 -37697654 - AluJo SINE Alu -126 186 1 314 323 6 102 chr17 51806899 51806960 -37697593 + L2 LINE L2 3191 3230 -42 2544 71 0 0 chr17 51806960 51807257 -37697296 - AluSc SINE Alu -12 297 1 314 323 6 102 chr17 51807257 51807297 -37697256 + L2 LINE L2 3230 3272 0 2057 144 16 7 chr17 51807394 51807699 -37696854 + AluSx SINE Alu 1 308 -4 723 252 30 116 chr17 51807716 51808077 -37696476 - L2 LINE L2 -13 3300 2971 2339 106 3 3 chr17 51808649 51808960 -37695593 - AluSq SINE Alu -2 311 1 2454 88 0 0 chr17 51808993 51809288 -37695265 - AluSx SINE Alu -17 295 1 2279 103 7 0 chr17 51810591 51810881 -37693672 + AluSx SINE Alu 1 292 -20 216 0 0 0 chr17 51810930 51810954 -37693599 + (T)n Simple_repeat Simple_repeat 1 24 0 715 186 34 51 chr17 51810982 51811159 -37693394 - MER5B DNA MER1_type -1 177 4 1996 150 3 10 chr17 51811478 51811785 -37692768 - AluJb SINE Alu -7 305 1 1227 152 175 4 chr17 51812836 51813093 -37691460 - AluJo SINE Alu -11 301 1 272 193 105 0 chr17 51813431 51813513 -37691040 + FLAM_A SINE Alu 10 92 -41 455 320 80 11 chr17 51813824 51813999 -37690554 + MER5A DNA MER1_type 1 187 -2 206 238 0 0 chr17 51815582 51815624 -37688929 + (TG)n Simple_repeat Simple_repeat 2 43 0 2413 80 0 0 chr17 51815906 51816206 -37688347 - AluSp SINE Alu 0 313 14 2392 88 0 0 chr17 51816723 51817018 -37687535 + AluSx SINE Alu 1 295 -17 962 187 23 9 chr17 51819198 51819412 -37685141 + MER20 DNA MER1_type 1 217 -2 215 186 0 68 chr17 51819719 51819778 -37684775 + (GGATG)n Simple_repeat Simple_repeat 3 57 0 371 248 175 15 chr17 51824385 51824522 -37680031 - MIR3 SINE MIR -34 174 16 333 186 0 0 chr17 51825336 51825406 -37679147 + CT-rich Low_complexity Low_complexity 3 72 0 222 91 0 0 chr17 51826530 51826563 -37677990 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 1734 149 55 0 chr17 51828705 51828980 -37675573 - AluJb SINE Alu -22 290 1 2252 85 10 7 chr17 51829323 51829617 -37674936 + AluSq SINE Alu 1 295 -18 1226 153 128 8 chr17 51829732 51829967 -37674586 - MER7A DNA MER2_type 0 336 74 423 111 0 0 chr17 51830007 51830070 -37674483 + Alu SINE Alu 234 296 -16 325 235 82 0 chr17 51830070 51830155 -37674398 - MER7A DNA MER2_type -256 90 1 2328 79 0 46 chr17 51830301 51830604 -37673949 + AluSg SINE Alu 1 289 -21 2498 71 0 3 chr17 51832019 51832316 -37672237 - AluY SINE Alu -15 296 1 1699 148 57 0 chr17 51832321 51832604 -37671949 - AluSx SINE Alu -13 299 1 1602 150 22 70 chr17 51833895 51834209 -37670344 + AluJo SINE Alu 1 299 -13 2358 111 7 0 chr17 51834565 51834871 -37669682 + AluSx SINE Alu 1 308 -4 2176 94 34 3 chr17 51835534 51835831 -37668722 + AluSc SINE Alu 1 306 -3 2366 93 7 7 chr17 51835842 51836142 -37668411 + AluSx SINE Alu 1 300 -12 2203 108 0 44 chr17 51838522 51838837 -37665716 - AluSx SINE Alu -11 301 1 2401 69 14 0 chr17 51839032 51839320 -37665233 + AluY SINE Alu 1 292 -19 2044 124 24 10 chr17 51839375 51839666 -37664887 + AluSg SINE Alu 1 295 -15 2368 90 10 3 chr17 51840071 51840372 -37664181 + AluSx SINE Alu 1 303 -9 2296 95 3 0 chr17 51841724 51842019 -37662534 - AluY SINE Alu -15 296 1 203 259 17 0 chr17 51842514 51842572 -37661981 + CT-rich Low_complexity Low_complexity 3 61 0 1310 165 129 22 chr17 51842949 51843221 -37661332 + AluJo SINE Alu 1 301 -1 1947 96 0 105 chr17 51843783 51844116 -37660437 - AluY SINE Alu -13 298 1 631 226 0 0 chr17 51844227 51844351 -37660202 + FLAM_C SINE Alu 2 125 -18 1137 116 0 0 chr17 51844398 51844544 -37660009 + AluSq/x SINE Alu 1 146 -166 442 129 0 0 chr17 51844544 51844614 -37659939 + AluS SINE Alu 225 294 -15 2418 81 3 0 chr17 51844722 51845018 -37659535 - AluY SINE Alu -14 297 1 2018 144 0 3 chr17 51845020 51845312 -37659241 - AluSg SINE Alu -17 293 3 2266 94 7 29 chr17 51845314 51845623 -37658930 - AluSg SINE Alu -8 302 1 2098 124 11 0 chr17 51845650 51845932 -37658621 - AluSx SINE Alu -27 285 1 1817 181 17 3 chr17 51846024 51846316 -37658237 - AluJb SINE Alu -16 296 1 1819 143 22 4 chr17 51846589 51846862 -37657691 - AluSx SINE Alu -32 280 3 2590 74 3 0 chr17 51847167 51847476 -37657077 + AluSg SINE Alu 1 310 0 387 0 0 0 chr17 51847478 51847521 -37657032 + (TA)n Simple_repeat Simple_repeat 1 43 0 839 139 0 0 chr17 51847609 51847731 -37656822 - AluJo SINE Alu -175 137 16 2216 118 0 10 chr17 51847971 51848268 -37656285 - AluSq SINE Alu -19 294 1 631 146 29 2 chr17 51848499 51848738 -37655815 + AluJ SINE Alu 5 290 -22 2606 74 0 0 chr17 51848747 51849058 -37655495 + AluY SINE Alu 1 311 0 2108 119 17 7 chr17 51849069 51849362 -37655191 - AluSx SINE Alu -14 298 3 2307 109 3 31 chr17 51849370 51849692 -37654861 - AluSp SINE Alu 0 313 1 903 170 0 0 chr17 51849695 51849836 -37654717 - FLAM_C SINE Alu -2 141 1 232 300 150 55 chr17 51849856 51850072 -37654481 - HAL1 LINE L1 -2183 324 71 2267 88 0 20 chr17 51850072 51850367 -37654186 + AluSq SINE Alu 6 294 -19 232 300 150 55 chr17 51850367 51850443 -37654110 - HAL1 LINE L1 -2436 71 4 264 193 0 114 chr17 51850466 51850527 -37654026 - MIR SINE MIR -16 246 196 1245 155 74 94 chr17 51850527 51850729 -37653824 - AluJo SINE Alu -21 291 95 2295 82 13 10 chr17 51850729 51851034 -37653519 - AluSg SINE Alu -3 307 2 1245 155 74 94 chr17 51851034 51851128 -37653425 - AluJo SINE Alu -217 95 1 264 193 0 114 chr17 51851128 51851154 -37653399 - MIR SINE MIR -66 196 169 2619 60 0 0 chr17 51851155 51851457 -37653096 + AluY SINE Alu 1 302 -9 273 272 105 53 chr17 51851739 51851853 -37652700 - MIR SINE MIR -65 197 78 1984 149 0 16 chr17 51852310 51852625 -37651928 + AluSx SINE Alu 1 310 -2 2228 123 0 19 chr17 51853100 51853416 -37651137 + AluSx SINE Alu 1 310 -2 2376 99 0 0 chr17 51853434 51853736 -37650817 + AluY SINE Alu 1 302 -9 204 179 51 0 chr17 51853783 51853822 -37650731 - MER5B DNA MER1_type -25 153 113 2300 81 7 14 chr17 51853823 51854118 -37650435 + AluSg SINE Alu 3 295 -15 2221 125 0 6 chr17 51854118 51854429 -37650124 + AluSc SINE Alu 1 309 0 2194 101 0 7 chr17 51854555 51854851 -37649702 + AluSg SINE Alu 1 294 -16 2442 64 0 0 chr17 51854866 51855169 -37649384 + AluSg SINE Alu 2 304 0 799 112 0 0 chr17 51855204 51855311 -37649242 - U6 snRNA snRNA 0 107 1 227 171 229 14 chr17 51855333 51855403 -37649150 - L1MC/D LINE L1 -1939 5869 5785 431 141 24 0 chr17 51855441 51855526 -37649027 + AluS SINE Alu 222 308 -4 2405 77 0 3 chr17 51855629 51855927 -37648626 - AluY SINE Alu -14 297 1 269 292 0 0 chr17 51855927 51855992 -37648561 + MER5B DNA MER1_type 114 178 0 2081 124 7 3 chr17 51856068 51856366 -37648187 + AluSq SINE Alu 1 299 -14 2044 91 62 0 chr17 51856454 51856728 -37647825 - AluSg SINE Alu -19 291 1 483 312 77 6 chr17 51856925 51857095 -37647458 + L2 LINE L2 2435 2616 -698 220 269 54 54 chr17 51857217 51857310 -37647243 + L2 LINE L2 2978 3070 -202 421 348 100 62 chr17 51857336 51857755 -37646798 - L2 LINE L2 0 3272 2838 2118 119 7 3 chr17 51857905 51858062 -37646491 - AluSq SINE Alu -18 295 135 2246 114 7 7 chr17 51858062 51858369 -37646184 - AluSx SINE Alu -5 307 1 2118 119 7 3 chr17 51858369 51858505 -37646048 - AluSq SINE Alu -178 135 1 2354 108 3 0 chr17 51858510 51858816 -37645737 - AluSp SINE Alu -6 307 1 21 0 0 0 chr17 51858841 51858862 -37645691 + AT_rich Low_complexity Low_complexity 1 21 0 625 189 0 41 chr17 51858862 51858984 -37645569 + FLAM_C SINE Alu 1 117 -26 2040 117 28 0 chr17 51858995 51859278 -37645275 - AluSg SINE Alu -19 291 1 2525 80 3 0 chr17 51859315 51859626 -37644927 + AluSp SINE Alu 1 312 -1 1160 127 0 48 chr17 51859640 51859829 -37644724 + AluSg/x SINE Alu 129 308 -2 2258 105 20 0 chr17 51860364 51860668 -37643885 + AluSp SINE Alu 1 310 -3 1980 159 0 0 chr17 51860682 51860972 -37643581 + AluSx SINE Alu 5 294 -18 1892 128 26 30 chr17 51860977 51861282 -37643271 + AluSx SINE Alu 1 304 -8 2000 163 3 0 chr17 51861292 51861599 -37642954 + AluSx SINE Alu 1 308 -4 233 246 0 33 chr17 51861630 51861691 -37642862 + L2 LINE L2 2992 3050 -222 1647 114 126 12 chr17 51861838 51862092 -37642461 + AluSg1 SINE Alu 5 287 -22 2022 139 7 0 chr17 51862410 51862705 -37641848 - AluSx SINE Alu -15 297 1 2152 126 3 19 chr17 51863016 51863326 -37641227 + AluSx SINE Alu 1 305 -7 812 161 0 0 chr17 51863337 51863455 -37641098 + FLAM_C SINE Alu 1 118 -25 2328 82 3 13 chr17 51863495 51863798 -37640755 + AluSq SINE Alu 1 300 -13 235 157 78 0 chr17 51863801 51863852 -37640701 + L1MA7 LINE L1 6236 6290 -1 2243 99 0 7 chr17 51863859 51864161 -37640392 + AluSx SINE Alu 1 300 -12 928 189 78 0 chr17 51864592 51864816 -37639737 + AluJo SINE Alu 84 312 0 248 106 64 21 chr17 51864950 51864997 -37639556 - L2 LINE L2 -2 3270 3222 1619 77 5 0 chr17 51865020 51865216 -37639337 - AluSp SINE Alu -9 304 108 2314 67 3 20 chr17 51865633 51865930 -37638623 - AluSc SINE Alu -17 292 1 2385 88 3 0 chr17 51866385 51866690 -37637863 + AluSg SINE Alu 1 306 -4 26 0 0 0 chr17 51867733 51867759 -37636794 + GC_rich Low_complexity Low_complexity 1 26 0 2269 103 7 0 chr17 51868195 51868496 -37636057 + AluSx SINE Alu 1 303 -9 224 394 20 0 chr17 51868694 51868710 -37635843 + L2 LINE L2 2992 3006 -266 2284 84 3 0 chr17 51868710 51868997 -37635556 + AluSq SINE Alu 6 293 -20 224 394 20 0 chr17 51868997 51869079 -37635474 + L2 LINE L2 3006 3092 -180 266 211 0 0 chr17 51869525 51869577 -37634976 + LTR30 LTR ERV1 1 52 -670 282 125 0 21 chr17 51869577 51869625 -37634928 + LTR12 LTR ERV1 53 99 -615 1724 130 29 148 chr17 51869626 51870104 -37634449 + LTR12 LTR ERV1 60 480 -234 1919 122 35 7 chr17 51870261 51870547 -37634006 - AluSx SINE Alu -10 302 9 1983 144 6 16 chr17 51870570 51870748 -37633805 - AluSg SINE Alu 0 310 135 2061 129 3 0 chr17 51870748 51871043 -37633510 - AluSx SINE Alu -16 296 1 1983 144 6 16 chr17 51871043 51871177 -37633376 - AluSg SINE Alu -175 135 1 1521 203 37 10 chr17 51871179 51871474 -37633079 - AluJb SINE Alu -9 303 1 563 267 79 10 chr17 51871556 51871758 -37632795 - L3 LINE CR1 -202 1375 1160 1190 134 0 0 chr17 51871848 51872012 -37632541 - AluSc SINE Alu -3 306 143 932 164 38 13 chr17 51872022 51872181 -37632372 + AluJo SINE Alu 60 222 -90 1471 100 0 0 chr17 51872202 51872382 -37632171 + AluSg SINE Alu 1 180 -130 505 155 60 17 chr17 51872391 51872507 -37632046 + Charlie1 DNA MER1_type 2008 2128 -633 21 36 0 0 chr17 51872623 51872651 -37631902 + AT_rich Low_complexity Low_complexity 1 28 0 1149 177 0 0 chr17 51872651 51872837 -37631716 + AluJb SINE Alu 113 298 -14 856 180 67 0 chr17 51872839 51873017 -37631536 + Charlie1 DNA MER1_type 2271 2460 -301 2002 134 38 0 chr17 51873018 51873310 -37631243 - AluSq SINE Alu -10 303 1 1562 130 82 24 chr17 51873330 51873623 -37630930 - AluJo SINE Alu -2 310 1 2045 133 3 0 chr17 51875459 51875753 -37628800 - AluSx SINE Alu -12 300 6 2514 71 0 0 chr17 51875788 51876084 -37628469 - AluSc SINE Alu -13 296 1 1657 91 4 9 chr17 51876094 51876324 -37628229 - AluSg/x SINE Alu -3 307 79 2527 67 3 0 chr17 51877892 51878190 -37626363 + AluSp SINE Alu 1 299 -14 650 142 33 17 chr17 51878830 51878950 -37625603 + L2 LINE L2 3190 3311 -2 2362 80 0 23 chr17 51879258 51879558 -37624995 - AluSq SINE Alu -14 299 7 1848 155 6 22 chr17 51880058 51880374 -37624179 - AluJo SINE Alu -1 311 1 2216 114 0 3 chr17 51880385 51880682 -37623871 - AluSx SINE Alu -16 296 1 2118 83 52 7 chr17 51880692 51880981 -37623572 - AluSp SINE Alu -11 302 1 1679 96 0 5 chr17 51880981 51881200 -37623353 - AluSg SINE Alu -9 300 83 1946 123 68 7 chr17 51881201 51881493 -37623060 - AluSq SINE Alu -3 310 1 610 144 33 0 chr17 51881493 51881583 -37622970 - AluSg SINE Alu -216 94 2 2388 99 0 0 chr17 51881584 51881888 -37622665 - AluSx SINE Alu -8 304 1 1497 161 79 21 chr17 51882455 51882513 -37622040 - AluJo SINE Alu 0 312 259 2159 91 37 3 chr17 51882513 51882809 -37621744 + AluSg1 SINE Alu 2 307 -2 1497 161 79 21 chr17 51882809 51883041 -37621512 - AluJo SINE Alu -53 259 5 2147 123 23 0 chr17 51883090 51883392 -37621161 - AluSg SINE Alu -1 309 1 1145 96 0 57 chr17 51883392 51883569 -37620984 - AluSg/x SINE Alu -16 296 130 2084 125 3 22 chr17 51883570 51883749 -37620804 - AluSq SINE Alu -2 311 130 183 114 0 0 chr17 51883749 51883784 -37620769 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 2370 70 0 13 chr17 51883785 51884083 -37620470 - AluY SINE Alu -17 294 1 2084 125 3 22 chr17 51884083 51884213 -37620340 - AluSq SINE Alu -182 131 6 465 303 131 23 chr17 51884235 51884247 -37620306 + MIR SINE MIR 1 10 -252 1330 186 6 112 chr17 51884247 51884585 -37619968 + AluJo SINE Alu 1 302 0 465 303 131 23 chr17 51884585 51884793 -37619760 + MIR SINE MIR 10 245 -17 2276 85 14 10 chr17 51884825 51885120 -37619433 + AluSg SINE Alu 1 296 -14 2175 119 0 0 chr17 51885970 51886265 -37618288 - AluSx SINE Alu -4 308 14 1952 149 18 81 chr17 51886270 51886714 -37617839 - L1MB7 LINE L1 -9 6175 5760 2501 88 0 3 chr17 51886728 51887034 -37617519 - AluSx SINE Alu -7 305 1 2592 46 3 7 chr17 51887034 51887336 -37617217 - AluY SINE Alu -10 301 1 348 210 0 37 chr17 51887338 51887419 -37617134 - AluJb SINE Alu -170 132 55 293 139 0 0 chr17 51887444 51887487 -37617066 - MER57A LTR ERV1 -66 337 295 1363 164 14 0 chr17 51887520 51887727 -37616826 - AluJo SINE Alu -20 292 83 2202 107 9 35 chr17 51890735 51890918 -37613635 - AluSq SINE Alu -2 311 138 2315 102 0 22 chr17 51890918 51891232 -37613321 - AluSc SINE Alu -1 308 2 2202 107 9 35 chr17 51891232 51891367 -37613186 - AluSq SINE Alu -175 138 1 2266 113 3 0 chr17 51891658 51891960 -37612593 - AluSq SINE Alu -10 303 1 1115 172 51 33 chr17 51893712 51893927 -37610626 + MER20 DNA MER1_type 1 219 0 413 223 43 0 chr17 51894656 51894750 -37609803 - MER94 DNA DNA -35 99 2 240 35 0 0 chr17 51895262 51895291 -37609262 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 191 343 45 45 chr17 51895572 51895706 -37608847 + MIR3 SINE MIR 7 140 -68 1556 87 5 0 chr17 51895829 51896024 -37608529 + AluSg1 SINE Alu 1 196 -113 320 89 0 18 chr17 51896026 51896082 -37608471 + AluSg1 SINE Alu 241 295 -6 2247 105 30 0 chr17 51897282 51897578 -37606975 - AluSc SINE Alu -4 305 1 2655 68 0 0 chr17 51898304 51898614 -37605939 - AluSg SINE Alu 0 310 1 754 258 43 23 chr17 51898656 51898912 -37605641 - MIR SINE MIR 0 262 2 2058 128 13 10 chr17 51899172 51899302 -37605251 + AluSx SINE Alu 5 133 -179 2261 95 0 19 chr17 51899302 51899619 -37604934 + AluSx SINE Alu 1 311 -1 2058 128 13 10 chr17 51899619 51899793 -37604760 + AluSx SINE Alu 133 310 -2 629 263 138 25 chr17 51900452 51900806 -37603747 - L1MC4a LINE L1 -1779 6029 5636 2234 97 3 0 chr17 51900853 51901142 -37603411 - AluSg SINE Alu -20 290 1 2265 108 16 0 chr17 51901223 51901529 -37603024 - AluSx SINE Alu -1 311 1 1752 158 38 14 chr17 51902006 51902297 -37602256 - AluJb SINE Alu -14 298 1 1218 219 124 68 chr17 51902488 51902692 -37601861 + MLT1J LTR MaLR 1 192 -319 2332 98 7 3 chr17 51902692 51902997 -37601556 - AluSg SINE Alu -4 306 1 1218 219 124 68 chr17 51902997 51903202 -37601351 + MLT1J LTR MaLR 192 443 -68 2146 89 44 24 chr17 51903202 51903495 -37601058 - AluSx SINE Alu -13 299 1 1218 219 124 68 chr17 51903495 51903567 -37600986 + MLT1J LTR MaLR 443 510 -1 220 286 67 38 chr17 51904225 51904330 -37600223 - L2 LINE L2 -10 3262 3155 353 290 155 24 chr17 51904331 51904538 -37600015 + MIR SINE MIR 21 254 -8 2165 97 0 42 chr17 51904732 51904897 -37599656 - AluSx SINE Alu -13 299 151 2446 77 0 0 chr17 51904897 51905196 -37599357 - AluSx SINE Alu -13 299 1 2165 97 0 42 chr17 51905196 51905338 -37599215 - AluSx SINE Alu -161 151 5 2052 123 28 0 chr17 51905421 51905705 -37598848 - AluSg SINE Alu -18 292 1 2264 102 0 3 chr17 51905713 51906007 -37598546 - AluSg SINE Alu -17 293 1 1047 316 81 43 chr17 51906502 51907293 -37597260 + L2 LINE L2 1649 2409 -905 2193 119 0 31 chr17 51907293 51907613 -37596940 - AluSx SINE Alu -2 310 1 1047 316 81 43 chr17 51907613 51907901 -37596652 + L2 LINE L2 2409 2774 -540 1998 133 26 3 chr17 51907901 51908203 -37596350 - AluSq SINE Alu -4 309 1 1047 316 81 43 chr17 51908203 51908253 -37596300 + L2 LINE L2 2774 2821 -493 370 296 35 0 chr17 51908592 51908707 -37595846 + L2 LINE L2 3189 3307 -6 2398 70 3 0 chr17 51908707 51909022 -37595531 + AluSq SINE Alu 1 316 0 1610 153 60 50 chr17 51909328 51909629 -37594924 - AluJo SINE Alu -8 304 1 1498 147 13 74 chr17 51909716 51910015 -37594538 - AluJb SINE Alu -8 304 24 2337 92 0 7 chr17 51912737 51913032 -37591521 + AluSg SINE Alu 1 293 -17 2400 68 3 7 chr17 51913161 51913455 -37591098 - AluSq SINE Alu -20 293 1 22 0 0 0 chr17 51915295 51915317 -37589236 + AT_rich Low_complexity Low_complexity 1 22 0 273 57 0 0 chr17 51919551 51919586 -37584967 + (CA)n Simple_repeat Simple_repeat 2 36 0 222 37 0 0 chr17 51920421 51920448 -37584105 + (A)n Simple_repeat Simple_repeat 1 27 0 2236 102 0 30 chr17 51921303 51921608 -37582945 + AluSx SINE Alu 1 296 -16 234 0 0 0 chr17 51921632 51921658 -37582895 + (ATG)n Simple_repeat Simple_repeat 2 27 0 2178 98 35 0 chr17 51921658 51921944 -37582609 - AluSx SINE Alu -16 296 1 2185 117 13 0 chr17 51922101 51922399 -37582154 + AluSx SINE Alu 1 302 -10 183 175 75 0 chr17 51923458 51923498 -37581055 - L2 LINE L2 -9 3304 3262 180 267 0 0 chr17 51923465 51923510 -37581043 - MIR SINE MIR -13 249 205 * 259 277 113 21 chr17 51923541 51923682 -37580871 - MIR SINE MIR -25 237 84 2439 78 3 0 chr17 51923765 51924061 -37580492 - AluSx SINE Alu -15 297 1 2265 103 3 0 chr17 51924063 51924355 -37580198 - AluSx SINE Alu -19 293 1 2263 116 3 0 chr17 51924422 51924725 -37579828 + AluSp SINE Alu 1 304 -9 2493 57 0 66 chr17 51924791 51925124 -37579429 + AluY SINE Alu 1 311 0 2534 52 3 3 chr17 51925205 51925512 -37579041 + AluY SINE Alu 1 307 -4 253 303 26 0 chr17 51925816 51925892 -37578661 - MIR3 SINE MIR -16 192 115 1850 151 9 41 chr17 51926645 51926963 -37577590 - AluJo SINE Alu -4 308 1 1963 124 7 3 chr17 51928469 51928792 -37575761 - AluSx SINE Alu 0 324 1 26 0 0 0 chr17 51929337 51929363 -37575190 + AT_rich Low_complexity Low_complexity 1 26 0 181 74 0 0 chr17 51930117 51930144 -37574409 + MIR SINE MIR 34 60 -148 388 325 118 11 chr17 51931474 51931754 -37572799 - L2 LINE L2 -6 3307 2998 2401 99 3 0 chr17 51931914 51932226 -37572327 - AluSp SINE Alu 0 313 1 2061 151 0 3 chr17 51933388 51933692 -37570861 - AluJo SINE Alu -9 303 1 2280 95 0 0 chr17 51934901 51935215 -37569338 + AluSx SINE Alu 1 314 0 205 297 22 11 chr17 51936252 51936343 -37568210 + GA-rich Low_complexity Low_complexity 2 93 0 1936 152 14 3 chr17 51937236 51937533 -37567020 - AluSx SINE Alu -12 300 1 2238 106 3 19 chr17 51937620 51937931 -37566622 - AluSp SINE Alu -6 307 2 463 262 33 8 chr17 51937998 51938120 -37566433 - L2 LINE L2 -1 3271 3147 261 0 0 0 chr17 51938261 51938290 -37566263 + (TG)n Simple_repeat Simple_repeat 1 29 0 2224 116 3 0 chr17 51938307 51938610 -37565943 + AluSg SINE Alu 1 304 -6 203 247 32 75 chr17 51938746 51938839 -37565714 + L2 LINE L2 3180 3268 -45 1920 154 0 33 chr17 51939420 51939725 -37564828 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr17 51939741 51939762 -37564791 + AT_rich Low_complexity Low_complexity 1 21 0 183 336 139 0 chr17 51942216 51942353 -37562200 - L2 LINE L2 -176 3096 2941 198 0 0 0 chr17 51942974 51942996 -37561557 + (TGG)n Simple_repeat Simple_repeat 2 23 0 657 243 19 53 chr17 51943835 51944041 -37560512 - MIR SINE MIR 0 262 64 201 156 0 0 chr17 51946717 51946749 -37557804 + CT-rich Low_complexity Low_complexity 1 32 0 219 316 60 60 chr17 51948508 51948676 -37555877 + L3b LINE CR1 1297 1464 -119 203 350 98 17 chr17 51949370 51949604 -37554949 - L2 LINE L2 -193 3079 2827 405 0 0 0 chr17 51952982 51953027 -37551526 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2006 90 63 11 chr17 51953029 51953297 -37551256 - AluSg SINE Alu -28 282 1 1691 191 7 3 chr17 51954940 51955243 -37549310 + AluJo SINE Alu 9 312 0 1856 131 46 7 chr17 51955244 51955554 -37548999 + AluSx SINE Alu 1 312 0 418 255 132 0 chr17 51955650 51955756 -37548797 - L2 LINE L2 0 3272 3153 235 224 90 30 chr17 51955811 51955878 -37548675 + L2 LINE L2 3220 3290 -23 2284 108 0 16 chr17 51956190 51956505 -37548048 - AluSx SINE Alu -2 310 1 2330 70 7 20 chr17 51956638 51956939 -37547614 - AluY SINE Alu -14 297 1 2197 116 0 3 chr17 51957231 51957534 -37547019 + AluSg SINE Alu 1 302 -8 1006 127 13 13 chr17 51958562 51958719 -37545834 + FRAM SINE Alu 1 157 -19 2280 112 0 3 chr17 51959566 51959870 -37544683 - AluSp SINE Alu -10 303 1 501 281 82 0 chr17 51962563 51962698 -37541855 - MIR SINE MIR -40 222 77 1799 128 28 3 chr17 51962925 51963207 -37541346 - L1PA16 LINE L1 0 6166 5878 895 93 0 0 chr17 51963207 51963314 -37541239 - U6 snRNA snRNA 0 107 1 2314 100 0 3 chr17 51963504 51963805 -37540748 + AluSg SINE Alu 1 300 -10 1593 156 52 0 chr17 51963963 51964232 -37540321 + AluSx SINE Alu 30 312 0 2700 33 0 0 chr17 51964701 51965005 -37539548 + AluY SINE Alu 1 304 -7 439 307 99 56 chr17 51965702 51966104 -37538449 + L2 LINE L2 2671 3090 -182 1820 89 0 36 chr17 51966540 51966788 -37537765 + AluSg SINE Alu 6 244 -66 1389 207 76 3 chr17 51966888 51967202 -37537351 - L1ME LINE L1 -370 5794 5458 1116 173 12 25 chr17 51967223 51967466 -37537087 - L1M4 LINE L1 -632 5552 5313 239 312 81 43 chr17 51967895 51968081 -37536472 + L2 LINE L2 2687 2879 -435 587 141 0 0 chr17 51968315 51968393 -37536160 - AluJ/FLAM SINE Alu -233 79 2 225 268 36 0 chr17 51968913 51968969 -37535584 - MER65A LTR ERV1 -357 88 31 2103 141 0 0 chr17 51969803 51970100 -37534453 - AluJb SINE Alu -15 297 1 1537 177 4 0 chr17 51970714 51970974 -37533579 + AluJb SINE Alu 42 302 -10 2618 220 24 68 chr17 51973300 51973883 -37530670 + L1ME3A LINE L1 5440 6047 -123 2380 97 13 0 chr17 51973883 51974191 -37530362 + AluSx SINE Alu 1 312 0 2618 220 24 68 chr17 51974191 51974299 -37530254 + L1ME3A LINE L1 6047 6097 -73 2101 112 0 0 chr17 51974299 51974598 -37529955 + AluSg SINE Alu 5 303 0 2618 220 24 68 chr17 51974598 51974669 -37529884 + L1ME3A LINE L1 6097 6170 0 254 296 61 97 chr17 51974814 51975010 -37529543 + L3b LINE CR1 1180 1368 -215 1943 112 0 0 chr17 51975796 51976054 -37528499 - AluSg SINE Alu -20 290 33 2110 95 0 4 chr17 51976154 51976427 -37528126 - AluSq SINE Alu -41 272 1 211 213 147 40 chr17 51976611 51976686 -37527867 + L2 LINE L2 3189 3271 -1 560 142 19 0 chr17 51977015 51977121 -37527432 + CT-rich Low_complexity Low_complexity 1 108 0 1761 155 0 58 chr17 51977121 51977450 -37527103 - AluJo SINE Alu -2 310 1 2055 95 3 62 chr17 51979827 51980152 -37524401 - AluSq SINE Alu -7 306 1 207 162 0 0 chr17 51980669 51980706 -37523847 + CT-rich Low_complexity Low_complexity 2 38 0 1992 146 0 3 chr17 51980706 51981164 -37523389 - AluJb SINE Alu 0 457 1 2831 196 91 16 chr17 51981226 51981954 -37522599 + HAL1 LINE L1 1251 2032 -475 1140 168 59 30 chr17 51981971 51982173 -37522380 - MER21B LTR ERV1 -349 514 307 972 233 90 59 chr17 51982218 51982586 -37521967 + HAL1 LINE L1 2074 2458 -49 703 214 51 0 chr17 51982586 51982703 -37521850 - FLAM_A SINE Alu -10 123 1 972 233 90 59 chr17 51982703 51982755 -37521798 + HAL1 LINE L1 2458 2507 0 2114 129 10 13 chr17 51982956 51983265 -37521288 + AluSx SINE Alu 1 308 -4 225 229 118 111 chr17 51984743 51984887 -37519666 - MIR SINE MIR -59 203 59 581 277 11 28 chr17 51985999 51986176 -37518377 - MER5B DNA MER1_type -2 176 3 501 207 30 22 chr17 51986666 51986801 -37517752 - MLT1J LTR MaLR 0 511 376 877 141 0 16 chr17 51986913 51987041 -37517512 + FLAM_C SINE Alu 1 126 -7 590 196 200 79 chr17 51987544 51987809 -37516744 - MLT1J LTR MaLR -153 358 62 2301 90 0 26 chr17 51988813 51989123 -37515430 + AluSp SINE Alu 1 302 -11 802 176 8 0 chr17 51990201 51990326 -37514227 - FLAM_C SINE Alu -17 126 1 2179 93 0 0 chr17 51990406 51990723 -37513830 + AluSx SINE Alu 14 330 0 2472 76 0 0 chr17 51990841 51991142 -37513411 + AluSg SINE Alu 3 303 -7 248 51 0 26 chr17 51992053 51992092 -37512461 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 493 107 0 12 chr17 51992088 51992172 -37512381 + (GGA)n Simple_repeat Simple_repeat 2 84 0 207 254 159 0 chr17 51993288 51993351 -37511202 + L2 LINE L2 3241 3313 0 362 307 66 7 chr17 51995327 51995464 -37509089 + MIR3 SINE MIR 49 193 -15 746 256 164 0 chr17 51995789 51996008 -37508545 + MIR SINE MIR 3 257 -5 273 109 0 0 chr17 51996230 51996276 -37508277 + (GA)n Simple_repeat Simple_repeat 1 46 0 824 243 44 0 chr17 51996637 51996818 -37507735 - MIR SINE MIR -10 252 64 220 304 89 0 chr17 51997124 51997203 -37507350 + L2 LINE L2 3204 3289 -24 23 54 0 0 chr17 51997254 51997291 -37507262 + AT_rich Low_complexity Low_complexity 1 37 0 2160 113 0 0 chr17 51997396 51997721 -37506832 + AluSx SINE Alu 1 325 0 1913 151 0 7 chr17 51998531 51998822 -37505731 + AluJb SINE Alu 2 290 -22 316 349 30 47 chr17 51999177 51999346 -37505207 + MER5A DNA MER1_type 17 182 -7 289 310 153 52 chr17 51999634 51999921 -37504632 + L3 LINE CR1 1234 1549 -28 241 281 167 9 chr17 51999998 52000112 -37504441 - MIR3 SINE MIR -66 142 11 331 292 45 0 chr17 52000204 52000293 -37504260 + MER5A DNA MER1_type 44 136 -53 2164 118 0 10 chr17 52001630 52001926 -37502627 + AluSg SINE Alu 1 293 -17 259 347 40 67 chr17 52002677 52002902 -37501651 - L2 LINE L2 -15 3298 3080 204 301 59 59 chr17 52002978 52003114 -37501439 + MIR SINE MIR 117 252 -10 319 309 173 22 chr17 52004232 52004371 -37500182 - L2 LINE L2 -1 3271 3112 345 374 71 15 chr17 52004711 52004909 -37499644 - L2 LINE L2 -236 3036 2828 814 309 0 5 chr17 52004951 52005171 -37499382 - MIR SINE MIR -25 237 19 561 356 87 35 chr17 52005546 52005973 -37498580 - L2 LINE L2 -515 2799 2351 180 0 0 0 chr17 52006016 52006036 -37498517 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2243 97 0 0 chr17 52006041 52006331 -37498222 - AluSx SINE Alu -2 310 21 1703 148 99 11 chr17 52006444 52006728 -37497825 - AluJo SINE Alu -1 311 3 399 21 0 0 chr17 52007887 52007935 -37496618 + (GA)n Simple_repeat Simple_repeat 1 48 0 204 212 0 94 chr17 52012003 52012088 -37492465 + A-rich Low_complexity Low_complexity 4 80 0 867 153 48 96 chr17 52013630 52013751 -37490802 + MIR SINE MIR 34 139 -123 2199 111 3 0 chr17 52013751 52014072 -37490481 + AluSx SINE Alu 1 312 0 867 153 48 96 chr17 52014072 52014181 -37490372 + MIR SINE MIR 139 252 -10 24 0 0 0 chr17 52014553 52014577 -37489976 + AT_rich Low_complexity Low_complexity 1 24 0 374 289 178 0 chr17 52014611 52014746 -37489807 - MIR3 SINE MIR -11 197 39 272 218 51 51 chr17 52014926 52015004 -37489549 + L2 LINE L2 3195 3272 0 270 185 34 76 chr17 52015909 52016028 -37488525 + L2 LINE L2 3093 3206 -107 2035 143 0 3 chr17 52016345 52016653 -37487900 + AluSx SINE Alu 5 311 -1 1067 22 8 22 chr17 52016972 52017106 -37487447 + AluY SINE Alu 1 132 -179 1826 152 31 3 chr17 52017449 52017738 -37486815 + AluJb SINE Alu 1 297 -15 2039 103 0 4 chr17 52018270 52018533 -37486020 - AluSg SINE Alu -48 262 1 201 178 0 0 chr17 52020178 52020223 -37484330 + GA-rich Low_complexity Low_complexity 2 46 0 405 86 0 0 chr17 52020667 52020725 -37483828 + (TG)n Simple_repeat Simple_repeat 2 59 0 187 222 22 0 chr17 52022585 52022630 -37481923 - L2 LINE L2 0 3313 3268 240 86 0 0 chr17 52023369 52023404 -37481149 + (TA)n Simple_repeat Simple_repeat 1 35 0 198 0 0 0 chr17 52024129 52024151 -37480402 + (TG)n Simple_repeat Simple_repeat 1 22 0 24 32 0 0 chr17 52025073 52025104 -37479449 + AT_rich Low_complexity Low_complexity 1 31 0 300 111 0 0 chr17 52025557 52025602 -37478951 + (T)n Simple_repeat Simple_repeat 1 45 0 25 31 0 0 chr17 52031389 52031421 -37473132 + AT_rich Low_complexity Low_complexity 1 32 0 248 137 20 0 chr17 52032168 52032219 -37472334 + (TA)n Simple_repeat Simple_repeat 1 52 0 342 0 0 0 chr17 52032700 52032738 -37471815 + (CA)n Simple_repeat Simple_repeat 2 39 0 2104 86 50 4 chr17 52033178 52033456 -37471097 + AluSg SINE Alu 1 291 -19 288 0 0 0 chr17 52033456 52033488 -37471065 + (CAAG)n Simple_repeat Simple_repeat 2 33 0 309 100 0 0 chr17 52034072 52034122 -37470431 + (CA)n Simple_repeat Simple_repeat 2 51 0 2569 63 0 16 chr17 52034448 52034764 -37469789 - AluY SINE Alu 0 311 1 335 247 12 12 chr17 52035893 52035974 -37468579 - MIR SINE MIR -111 151 71 2249 111 7 0 chr17 52036448 52036746 -37467807 - AluSx SINE Alu -12 300 1 520 323 142 16 chr17 52036747 52037177 -37467376 + L1M4 LINE L1 4566 5049 -1097 28 29 0 0 chr17 52037729 52037764 -37466789 + AT_rich Low_complexity Low_complexity 1 35 0 2121 77 6 61 chr17 52037766 52038079 -37466474 + AluSp SINE Alu 1 296 -17 31 19 0 38 chr17 52038379 52038405 -37466148 + AT_rich Low_complexity Low_complexity 1 26 -25 2140 113 3 0 chr17 52038405 52038705 -37465848 - AluSg SINE Alu -9 301 1 31 19 0 38 chr17 52038705 52038731 -37465822 + AT_rich Low_complexity Low_complexity 26 51 0 274 258 36 27 chr17 52038855 52038966 -37465587 - L1MC/D LINE L1 -334 5787 5687 22 0 0 0 chr17 52039337 52039359 -37465194 + AT_rich Low_complexity Low_complexity 1 22 0 1779 171 30 13 chr17 52039419 52039724 -37464829 - AluJo SINE Alu 0 312 3 184 324 193 21 chr17 52039757 52039902 -37464651 + MER5A DNA MER1_type 1 170 -19 2104 119 7 0 chr17 52040204 52040489 -37464064 - AluSx SINE Alu -18 294 8 2075 141 0 10 chr17 52040609 52040921 -37463632 - AluJb SINE Alu -3 309 1 23 0 0 0 chr17 52041369 52041392 -37463161 + AT_rich Low_complexity Low_complexity 1 23 0 2032 98 24 10 chr17 52041487 52041783 -37462770 - AluSx SINE Alu -12 300 1 332 272 88 15 chr17 52041836 52041972 -37462581 - MER5A DNA MER1_type -1 188 43 1470 158 3 98 chr17 52041997 52042171 -37462382 - AluJo SINE Alu -25 287 98 1916 153 0 23 chr17 52042171 52042471 -37462082 + AluSx SINE Alu 1 293 -19 2345 82 3 0 chr17 52042479 52042773 -37461780 + AluSp SINE Alu 1 295 -18 1470 158 3 98 chr17 52042773 52042906 -37461647 - AluJo SINE Alu -221 91 1 412 348 148 28 chr17 52042930 52043646 -37460907 + L2 LINE L2 1488 2289 -1025 189 107 0 0 chr17 52043804 52043832 -37460721 + (CTG)n Simple_repeat Simple_repeat 2 29 0 474 319 71 71 chr17 52044231 52044585 -37459968 + L2 LINE L2 2871 3224 -48 722 179 71 43 chr17 52045776 52045960 -37458593 - AluJb SINE Alu -123 189 1 202 342 156 25 chr17 52046147 52046346 -37458207 + L2 LINE L2 2993 3217 -55 240 307 208 30 chr17 52046622 52046925 -37457628 - L2 LINE L2 -649 2665 2309 238 258 273 15 chr17 52046928 52047060 -37457493 - MIR SINE MIR -93 169 4 1847 178 59 71 chr17 52048214 52048250 -37456303 - L1ME1 LINE L1 -5 6161 6126 2058 106 0 58 chr17 52048250 52048580 -37455973 + AluSx SINE Alu 1 311 -1 1847 178 59 71 chr17 52048580 52049021 -37455532 - L1ME1 LINE L1 -40 6126 5690 212 346 0 0 chr17 52049023 52049075 -37455478 - MIR SINE MIR -191 71 20 2278 113 3 3 chr17 52049079 52049388 -37455165 - AluSc SINE Alu 0 309 1 22 0 0 0 chr17 52049902 52049924 -37454629 + AT_rich Low_complexity Low_complexity 1 22 0 567 173 14 36 chr17 52050247 52050386 -37454167 - L1MC5 LINE L1 -42 7919 7784 706 163 22 0 chr17 52050413 52050548 -37454005 - L1MD3 LINE L1 -10 7985 7848 1756 184 3 13 chr17 52050556 52050871 -37453682 + AluJo SINE Alu 1 312 0 25 0 0 0 chr17 52051378 52051403 -37453150 + AT_rich Low_complexity Low_complexity 1 25 0 504 218 9 27 chr17 52051422 52051532 -37453021 + MIR SINE MIR 2 109 -153 2298 101 0 0 chr17 52053399 52053695 -37450858 + AluSg SINE Alu 1 296 -14 739 274 37 19 chr17 52053891 52054106 -37450447 + MIR SINE MIR 32 250 -12 2177 82 4 4 chr17 52054882 52055202 -37449351 + AluSg SINE Alu 2 321 0 1189 177 26 0 chr17 52106176 52106408 -37398145 - L1MB3 LINE L1 -261 5922 5685 1860 144 149 11 chr17 52106579 52106955 -37397598 - MSTA LTR MaLR 0 428 1 276 297 16 55 chr17 52107028 52107210 -37397343 - L2 LINE L2 -619 2695 2521 1954 173 27 22 chr17 52107223 52107634 -37396919 + MSTB2 LTR MaLR 15 427 -30 236 103 26 0 chr17 52107737 52107776 -37396777 + L1MA9 LINE L1 5241 5280 -866 2019 131 21 31 chr17 52107792 52108174 -37396379 + L1MA9 LINE L1 5935 6312 0 21 95 0 0 chr17 52108534 52108597 -37395956 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr17 52109162 52109184 -37395369 + AT_rich Low_complexity Low_complexity 1 22 0 299 301 10 62 chr17 52110619 52110812 -37393741 - MER117 DNA MER1_type -9 188 6 246 214 24 71 chr17 52111140 52111224 -37393329 - MER116 DNA Mariner 0 80 1 772 196 0 0 chr17 52111491 52111624 -37392929 + FLAM_C SINE Alu 1 133 -10 995 182 77 62 chr17 52111738 52111850 -37392703 + MER33 DNA MER1_type 1 98 -2487 2083 104 18 0 chr17 52111850 52112273 -37392280 + AluSq SINE Alu 1 428 0 995 182 77 62 chr17 52112273 52112484 -37392069 + MER33 DNA MER1_type 98 318 -6 1742 168 44 0 chr17 52112960 52113258 -37391295 - AluJo SINE Alu -1 311 1 557 216 0 0 chr17 52114294 52114391 -37390162 + FLAM_C SINE Alu 22 118 -25 1634 160 71 7 chr17 52114426 52114707 -37389846 + AluJo SINE Alu 2 300 -12 261 233 2 26 chr17 52114708 52114785 -37389768 + MLT1J2 LTR MaLR 259 328 -122 1123 182 5 10 chr17 52114959 52115151 -37389402 - AluJb SINE Alu -15 297 107 671 41 20 0 chr17 52115160 52115258 -37389295 + THE1A-int LTR MaLR 1481 1580 0 2873 53 3 3 chr17 52115258 52115613 -37388940 + THE1A LTR MaLR 1 355 0 424 340 40 0 chr17 52117810 52117960 -37386593 + MIR SINE MIR 68 223 -39 1656 184 0 35 chr17 52118041 52118356 -37386197 + AluJo SINE Alu 1 304 -8 204 125 0 0 chr17 52118367 52118399 -37386154 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 229 182 0 73 chr17 52118522 52118577 -37385976 + L2 LINE L2 3263 3313 0 764 270 110 0 chr17 52118641 52118841 -37385712 + MIR SINE MIR 37 258 -4 1215 46 7 0 chr17 52118875 52119028 -37385525 + L1PA5 LINE L1 5997 6150 -4 1276 176 5 0 chr17 52119043 52119259 -37385294 - U3 snRNA snRNA 0 217 1 294 362 69 9 chr17 52119675 52119791 -37384762 + L2 LINE L2 3146 3268 -4 24 32 0 0 chr17 52120113 52120144 -37384409 + AT_rich Low_complexity Low_complexity 1 31 0 2253 88 0 29 chr17 52120387 52120693 -37383860 - AluSx SINE Alu -10 302 6 585 249 55 6 chr17 52121030 52121211 -37383342 - MLT1L LTR MaLR -5 610 421 285 227 0 0 chr17 52121369 52121435 -37383118 - MLT1L LTR MaLR -546 69 4 542 317 113 58 chr17 52121441 52122132 -37382421 - L2 LINE L2 -971 2343 1615 308 334 153 43 chr17 52122145 52122591 -37381962 - L2 LINE L2 -2645 669 175 634 276 54 18 chr17 52123702 52123923 -37380630 - MIR SINE MIR -14 248 20 831 208 108 49 chr17 52124086 52124494 -37380059 - L1MC5 LINE L1 -32 7929 7498 1878 160 6 10 chr17 52124553 52124866 -37379687 - AluJb SINE Alu 0 312 1 205 308 15 0 chr17 52125292 52125357 -37379196 - MIR SINE MIR -106 156 91 1231 142 38 5 chr17 52126747 52126959 -37377594 - MER20 DNA MER1_type 0 219 1 2155 122 3 13 chr17 52127279 52127590 -37376963 - AluSx SINE Alu -4 308 1 2288 96 0 0 chr17 52127916 52128209 -37376344 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr17 52128347 52128370 -37376183 + AT_rich Low_complexity Low_complexity 1 23 0 484 283 4 98 chr17 52128373 52128617 -37375936 - MIR SINE MIR -11 251 31 302 279 44 83 chr17 52129223 52129452 -37375101 + HAL1b LINE L1 389 608 -740 691 183 59 20 chr17 52129498 52129651 -37374902 + MER3 DNA MER1_type 51 209 0 320 346 142 11 chr17 52130001 52130261 -37374292 - L2 LINE L2 -172 3100 2807 471 220 17 34 chr17 52130931 52131049 -37373504 - MER5A DNA MER1_type -34 155 40 2353 95 0 7 chr17 52131562 52131867 -37372686 + AluSg SINE Alu 1 303 -7 573 242 200 12 chr17 52133016 52133232 -37371321 - MIR SINE MIR -2 260 7 344 385 66 7 chr17 52133252 52133538 -37371015 - L2 LINE L2 -639 2675 2373 260 373 59 67 chr17 52133717 52133870 -37370683 + L2 LINE L2 1070 1223 -2091 1884 169 3 19 chr17 52133870 52134183 -37370370 - AluJb SINE Alu -4 308 1 260 373 59 67 chr17 52134183 52134434 -37370119 + L2 LINE L2 1223 1471 -1843 4655 168 22 15 chr17 52135107 52135315 -37369238 + L1MB8 LINE L1 4498 4703 -1475 2280 126 0 0 chr17 52135315 52135625 -37368928 + AluSx SINE Alu 1 310 -2 4655 168 22 15 chr17 52135625 52136625 -37367928 + L1MB8 LINE L1 4703 5720 -458 2104 139 0 0 chr17 52136625 52136920 -37367633 - AluSx SINE Alu -16 296 2 4655 168 22 15 chr17 52136920 52137382 -37367171 + L1MB8 LINE L1 5720 6178 0 1469 157 30 41 chr17 52137394 52137662 -37366891 + AluJo SINE Alu 22 286 -26 192 77 0 0 chr17 52137714 52137740 -37366813 + (TA)n Simple_repeat Simple_repeat 2 27 0 449 317 49 45 chr17 52137764 52137988 -37366565 + HAL1b LINE L1 301 525 -823 2188 117 0 7 chr17 52138096 52138404 -37366149 + AluSx SINE Alu 1 306 -6 30 27 0 0 chr17 52138422 52138459 -37366094 + AT_rich Low_complexity Low_complexity 1 37 0 2128 116 13 0 chr17 52138462 52138763 -37365790 + AluSp SINE Alu 1 305 -8 23 33 0 0 chr17 52138963 52138993 -37365560 + AT_rich Low_complexity Low_complexity 1 30 0 416 183 54 0 chr17 52139223 52139316 -37365237 - L1MC4 LINE L1 -142 7900 7803 2134 95 18 0 chr17 52139335 52139619 -37364934 + AluSx SINE Alu 1 289 -23 246 216 0 20 chr17 52140819 52140870 -37363683 + L2 LINE L2 3219 3268 -4 1811 176 0 0 chr17 52141442 52141775 -37362778 + AluJb SINE Alu 1 333 0 1486 134 61 20 chr17 52142123 52142238 -37362315 - AluJb SINE Alu -55 257 148 2158 116 0 0 chr17 52142238 52142542 -37362011 - AluSq SINE Alu 0 304 1 1486 134 61 20 chr17 52142542 52142672 -37361881 - AluJb SINE Alu -164 148 1 628 355 66 11 chr17 52142683 52143032 -37361521 + L1M4 LINE L1 2786 3153 -2993 1917 148 21 3 chr17 52143253 52143543 -37361010 + AluJb SINE Alu 1 295 -17 532 324 150 29 chr17 52143886 52144306 -37360247 + L1M4 LINE L1 3367 3837 -2309 223 185 346 12 chr17 52144753 52144834 -37359719 - MIR SINE MIR -92 170 63 6313 149 22 37 chr17 52144834 52145059 -37359494 + L1MC3 LINE L1 5602 5829 -1956 2101 125 3 13 chr17 52145059 52145363 -37359190 + AluJb SINE Alu 1 301 -11 6313 149 22 37 chr17 52145363 52146321 -37358232 + L1MC3 LINE L1 5829 6800 -985 2306 107 0 25 chr17 52146321 52146638 -37357915 + AluSx SINE Alu 1 309 -3 6313 149 22 37 chr17 52146638 52146794 -37357759 + L1MC3 LINE L1 6800 6957 -828 1981 139 4 0 chr17 52146794 52147115 -37357438 + AluSx SINE Alu 1 322 0 6313 149 22 37 chr17 52147115 52147306 -37357247 + L1MC3 LINE L1 6957 7245 -540 422 218 20 10 chr17 52147408 52147509 -37357044 - MLT1J2 LTR MaLR -281 169 68 330 182 0 0 chr17 52147515 52147581 -37356972 + (TG)n Simple_repeat Simple_repeat 1 66 0 396 324 0 10 chr17 52148004 52148106 -37356447 - MIR SINE MIR -87 121 21 628 279 74 31 chr17 52148275 52148505 -37356048 - MIR SINE MIR 0 262 25 452 295 0 16 chr17 52148718 52148847 -37355706 - MIR3 SINE MIR -18 190 64 220 203 16 47 chr17 52149208 52149272 -37355281 + CT-rich Low_complexity Low_complexity 2 63 0 234 244 113 64 chr17 52149556 52149699 -37354854 - MIR SINE MIR -64 144 16 261 0 0 0 chr17 52149790 52149819 -37354734 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1882 132 3 28 chr17 52149822 52150111 -37354442 - AluSx SINE Alu -30 282 1 368 319 7 0 chr17 52150526 52150664 -37353889 + (CCCTAA)n Simple_repeat Simple_repeat 3 141 0 1265 163 46 26 chr17 52150788 52151094 -37353459 + L1MC3 LINE L1 7474 7785 0 219 197 0 66 chr17 52151147 52151208 -37353345 - L2 LINE L2 0 3272 3216 378 188 137 17 chr17 52151213 52151330 -37353223 + L1ME4a LINE L1 5990 6120 -1 456 179 48 0 chr17 52152060 52152144 -37352409 + L1M4 LINE L1 3622 3709 -2437 2244 110 3 0 chr17 52152164 52152455 -37352098 + AluSp SINE Alu 1 292 -21 180 0 0 0 chr17 52152455 52152475 -37352078 + (TA)n Simple_repeat Simple_repeat 2 21 0 468 298 76 105 chr17 52152958 52153404 -37351149 - L2 LINE L2 0 3272 2840 26 0 0 0 chr17 52154267 52154293 -37350260 + AT_rich Low_complexity Low_complexity 1 26 0 1950 138 0 0 chr17 52156288 52156597 -37347956 + AluSx SINE Alu 1 309 0 317 282 18 9 chr17 52156605 52156715 -37347838 + L1ME LINE L1 5669 5779 -342 1538 196 25 7 chr17 52156841 52157121 -37347432 + AluJo SINE Alu 5 289 -23 25 75 0 0 chr17 52157176 52157229 -37347324 + AT_rich Low_complexity Low_complexity 1 53 0 2514 181 138 35 chr17 52157241 52157878 -37346675 + L1ME2 LINE L1 5452 6154 -10 233 164 0 36 chr17 52157907 52157962 -37346591 + GA-rich Low_complexity Low_complexity 1 53 0 531 77 39 13 chr17 52157971 52158049 -37346504 - MADE1 DNA Mariner 0 80 1 2225 98 7 3 chr17 52158112 52158407 -37346146 - AluSx SINE Alu -16 296 1 2283 89 0 0 chr17 52160131 52160436 -37344117 + AluSg SINE Alu 1 305 0 2118 122 18 0 chr17 52162775 52163061 -37341492 + AluSx SINE Alu 6 296 -16 186 71 0 0 chr17 52163071 52163099 -37341454 + (CAA)n Simple_repeat Simple_repeat 2 29 0 253 257 86 0 chr17 52164178 52164248 -37340305 + MER20 DNA MER1_type 34 109 -110 910 30 0 0 chr17 52164253 52164353 -37340200 + HY3 scRNA scRNA 1 100 -1 560 150 24 79 chr17 52164376 52164503 -37340050 + MER20 DNA MER1_type 100 219 0 1473 145 22 104 chr17 52164568 52164908 -37339645 + AluYb8 SINE Alu 1 314 0 2115 106 3 3 chr17 52164917 52165223 -37339330 + AluSx SINE Alu 1 306 0 1752 179 7 13 chr17 52165228 52165535 -37339018 + AluJb SINE Alu 1 305 -7 907 203 0 0 chr17 52165537 52165722 -37338831 + AluJb SINE Alu 136 320 0 472 95 0 0 chr17 52165726 52165789 -37338764 + AluY SINE Alu 1 63 -255 1534 32 16 11 chr17 52165789 52165997 -37338556 + AluY SINE Alu 99 307 0 217 216 23 0 chr17 52166011 52166099 -37338454 + (CCCTAA)n Simple_repeat Simple_repeat 2 91 0 973 208 6 12 chr17 52166495 52166668 -37337885 - FAM SINE Alu -3 172 1 326 300 83 67 chr17 52166669 52166849 -37337704 - MIR SINE MIR -72 190 8 1846 134 7 14 chr17 52167379 52167696 -37336857 + AluSx SINE Alu 1 315 0 357 253 191 6 chr17 52167843 52168005 -37336548 + MIR3 SINE MIR 15 206 -2 547 228 54 42 chr17 52169324 52169491 -37335062 - MIR3 SINE MIR -14 194 26 2827 161 27 44 chr17 52169991 52170369 -37334184 - L1MB2 LINE L1 -4 6179 5839 2210 93 3 10 chr17 52170369 52170680 -37333873 - AluY SINE Alu -2 309 1 2827 161 27 44 chr17 52170680 52170942 -37333611 - L1MB2 LINE L1 -344 5839 5574 294 259 188 9 chr17 52170944 52171056 -37333497 + MIR SINE MIR 103 234 -28 329 275 110 28 chr17 52171080 52171189 -37333364 + L2 LINE L2 3155 3272 0 2291 100 13 0 chr17 52171223 52171523 -37333030 + AluSq SINE Alu 1 304 -9 187 305 17 0 chr17 52171530 52171589 -37332964 + L2 LINE L2 3251 3310 -3 258 324 0 0 chr17 52172295 52172366 -37332187 + L2 LINE L2 3243 3313 0 1249 158 8 73 chr17 52172573 52172807 -37331746 - MER20 DNA MER1_type 0 219 1 2528 64 0 0 chr17 52172915 52173213 -37331340 + AluY SINE Alu 1 298 -13 2068 130 3 0 chr17 52173216 52173509 -37331044 + AluSg SINE Alu 1 294 -16 180 351 26 13 chr17 52173785 52173862 -37330691 - MIR SINE MIR -80 128 51 2194 95 0 3 chr17 52174418 52174732 -37329821 + AluSx SINE Alu 1 313 0 329 213 103 29 chr17 52174734 52174818 -37329735 - L1ME2 LINE L1 -109 6055 5956 1000 143 39 100 chr17 52174818 52175049 -37329504 - MER20 DNA MER1_type 0 219 3 329 213 103 29 chr17 52175049 52175100 -37329453 - L1ME2 LINE L1 -208 5956 5910 261 346 9 9 chr17 52175478 52175585 -37328968 - MIR SINE MIR -73 189 83 2101 134 0 0 chr17 52175605 52175895 -37328658 + AluSx SINE Alu 1 290 -22 22 35 0 0 chr17 52175895 52175924 -37328629 + AT_rich Low_complexity Low_complexity 1 29 0 350 303 162 4 chr17 52176070 52176341 -37328212 - L1MC4 LINE L1 -36 8006 7693 * 5151 139 32 34 chr17 52176334 52177006 -37327547 - L1MB2 LINE L1 -1 6170 5498 2138 128 7 0 chr17 52177006 52177302 -37327251 - AluSx SINE Alu -14 298 1 359 68 17 0 chr17 52177302 52177361 -37327192 + (TTG)n Simple_repeat Simple_repeat 1 60 0 2253 82 0 4 chr17 52177363 52177644 -37326909 - AluSq SINE Alu -33 280 1 5151 139 32 34 chr17 52177644 52177968 -37326585 - L1MB2 LINE L1 -673 5498 5171 2145 97 42 0 chr17 52177978 52178266 -37326287 - AluSc SINE Alu -9 300 1 301 336 146 36 chr17 52178322 52178596 -37325957 + L2 LINE L2 2934 3237 -35 387 296 18 93 chr17 52178739 52178893 -37325660 - MIR SINE MIR -60 202 65 2340 99 3 0 chr17 52178893 52179195 -37325358 + AluSp SINE Alu 1 303 -10 387 296 18 93 chr17 52179195 52179241 -37325312 - MIR SINE MIR -197 65 17 767 303 101 38 chr17 52179241 52179607 -37324946 + L3 LINE CR1 1177 1565 -12 1763 183 3 0 chr17 52179712 52180001 -37324552 + AluJo SINE Alu 2 291 -21 284 274 97 88 chr17 52181493 52181638 -37322915 - MIR SINE MIR -64 144 16 436 106 48 39 chr17 52181710 52181814 -37322739 + L1MC5 LINE L1 7810 7914 -47 193 256 0 0 chr17 52181852 52181895 -37322658 - L3 LINE CR1 -212 1365 1323 836 257 32 23 chr17 52181945 52182163 -37322390 - MIR SINE MIR -12 250 31 2066 138 0 3 chr17 52182176 52182473 -37322080 - AluSx SINE Alu -16 296 1 1755 179 3 19 chr17 52184416 52184723 -37319830 + AluJb SINE Alu 1 302 -10 22 0 0 0 chr17 52185228 52185250 -37319303 + AT_rich Low_complexity Low_complexity 1 22 0 1011 205 4 66 chr17 52185265 52185314 -37319239 + MIR SINE MIR 2 52 -210 2107 135 37 45 chr17 52185314 52185692 -37318861 + THE1C LTR MaLR 1 375 0 1011 205 4 66 chr17 52185692 52185807 -37318746 + MIR SINE MIR 52 173 -89 1778 172 0 27 chr17 52185807 52186104 -37318449 + AluJo SINE Alu 1 289 -23 1011 205 4 66 chr17 52186104 52186152 -37318401 + MIR SINE MIR 173 201 -61 2328 89 7 0 chr17 52186152 52186454 -37318099 + AluSp SINE Alu 2 305 -8 1011 205 4 66 chr17 52186454 52186483 -37318070 + MIR SINE MIR 201 230 -32 1936 146 7 3 chr17 52186484 52186771 -37317782 + AluSx SINE Alu 1 288 -24 203 86 0 29 chr17 52186771 52186806 -37317747 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 341 203 0 0 chr17 52187815 52187874 -37316679 - L2 LINE L2 -10 3262 3204 393 268 66 96 chr17 52188109 52188263 -37316290 + MIR SINE MIR 6 154 -108 1759 120 0 4 chr17 52188263 52188505 -37316048 + AluSx SINE Alu 57 297 -15 393 268 66 96 chr17 52188505 52188548 -37316005 + MIR SINE MIR 154 197 -65 461 241 161 43 chr17 52188559 52188658 -37315895 - MER5A DNA MER1_type 0 189 103 1921 161 0 16 chr17 52188658 52188969 -37315584 - AluJo SINE Alu -5 307 2 461 241 161 43 chr17 52188969 52189031 -37315522 - MER5A DNA MER1_type -86 103 9 265 324 39 10 chr17 52190786 52190888 -37313665 - MIR SINE MIR -86 122 18 997 115 0 0 chr17 52191824 52191954 -37312599 - FLAM_C SINE Alu -12 131 2 692 232 170 18 chr17 52192274 52192498 -37312055 + MIR SINE MIR 5 262 0 1144 163 4 79 chr17 52193470 52193722 -37310831 - AluJb SINE Alu -79 233 1 5607 121 28 30 chr17 52193954 52194660 -37309893 - L1PA16 LINE L1 0 6166 5461 1771 132 39 7 chr17 52194660 52194940 -37309613 + AluJb SINE Alu 1 289 -23 5607 121 28 30 chr17 52194940 52195140 -37309413 - L1PA16 LINE L1 -705 5461 5262 216 361 21 21 chr17 52195208 52195305 -37309248 + L2 LINE L2 3176 3272 0 512 243 124 34 chr17 52195461 52195638 -37308915 + MIR SINE MIR 70 262 0 1973 170 0 0 chr17 52195737 52196048 -37308505 - AluJb SINE Alu -1 311 1 1699 119 88 8 chr17 52196068 52196370 -37308183 - AluSg SINE Alu 0 323 1 2070 148 10 0 chr17 52197323 52197621 -37306932 - AluJb SINE Alu -11 301 1 205 138 17 52 chr17 52197677 52197735 -37306818 + (TA)n Simple_repeat Simple_repeat 1 56 0 1207 122 38 42 chr17 52197736 52197949 -37306604 - L1MA9 LINE L1 -74 6238 6027 1585 61 5 10 chr17 52199219 52199417 -37305136 - MER107 DNA MER1_type 0 197 1 476 303 127 40 chr17 52199495 52199874 -37304679 - L2 LINE L2 -1349 1965 1554 721 171 101 0 chr17 52200009 52200138 -37304415 + FLAM_C SINE Alu 2 143 0 914 199 0 0 chr17 52200206 52200372 -37304181 + FRAM SINE Alu 5 170 -6 2414 88 0 0 chr17 52200559 52200855 -37303698 - AluSg SINE Alu -14 296 1 558 91 0 0 chr17 52200898 52200964 -37303589 + FRAM SINE Alu 67 132 -44 323 282 91 8 chr17 52201013 52201162 -37303391 + MER20B DNA MER1_type 54 217 -2 23 33 0 0 chr17 52202462 52202492 -37302061 + AT_rich Low_complexity Low_complexity 1 30 0 573 86 0 49 chr17 52203742 52203823 -37300730 + AluS SINE Alu 2 78 -234 734 167 6 0 chr17 52204653 52204809 -37299744 + CT-rich Low_complexity Low_complexity 1 157 0 2342 114 0 6 chr17 52204809 52205124 -37299429 - AluSq SINE Alu 0 313 1 261 293 40 10 chr17 52205124 52205223 -37299330 + MIR3 SINE MIR 103 204 -4 2182 97 4 0 chr17 52206573 52206875 -37297678 + AluSg SINE Alu 1 303 0 247 286 41 20 chr17 52206894 52206992 -37297561 + L3 LINE CR1 1298 1397 -180 250 228 119 30 chr17 52206995 52207096 -37297457 + L1M4 LINE L1 2450 2559 -3587 21 0 0 0 chr17 52207138 52207159 -37297394 + AT_rich Low_complexity Low_complexity 1 21 0 328 266 68 96 chr17 52207184 52207538 -37297015 + L1M4 LINE L1 2689 3032 -3114 562 254 87 6 chr17 52207690 52207863 -37296690 + MIR SINE MIR 76 262 0 214 188 21 0 chr17 52207860 52207908 -37296645 + L3 LINE CR1 1527 1575 -2 * 2151 79 0 0 chr17 52209415 52209682 -37294871 + AluY SINE Alu 40 306 -5 475 198 23 115 chr17 52209691 52209908 -37294645 + L2 LINE L2 3117 3313 0 215 217 100 50 chr17 52210053 52210113 -37294440 - L2 LINE L2 -12 3260 3198 22 70 0 0 chr17 52210251 52210294 -37294259 + AT_rich Low_complexity Low_complexity 1 43 0 917 262 33 25 chr17 52210506 52210750 -37293803 + MIR SINE MIR 3 248 -14 25 51 0 0 chr17 52210850 52210889 -37293664 + AT_rich Low_complexity Low_complexity 1 39 0 2188 118 0 0 chr17 52213014 52213311 -37291242 + AluSq SINE Alu 1 297 -16 1988 154 3 6 chr17 52214731 52215043 -37289510 + AluJo SINE Alu 1 311 -1 1537 164 11 0 chr17 52215113 52215375 -37289178 - L1MD3 LINE L1 0 7995 7731 2336 82 7 7 chr17 52217087 52217414 -37287139 + AluSp SINE Alu 1 327 0 26 50 0 0 chr17 52217464 52217504 -37287049 + AT_rich Low_complexity Low_complexity 1 40 0 273 146 0 0 chr17 52218723 52218771 -37285782 + (A)n Simple_repeat Simple_repeat 1 48 0 679 283 70 16 chr17 52219304 52219548 -37285005 - MIR SINE MIR -1 261 5 2389 99 0 6 chr17 52220287 52220662 -37283891 + AluSx SINE Alu 1 373 0 268 173 19 0 chr17 52221058 52221110 -37283443 - L1ME3 LINE L1 -1 6161 6109 22 25 0 25 chr17 52221929 52221948 -37282605 + AT_rich Low_complexity Low_complexity 1 19 -20 1733 198 0 0 chr17 52221948 52222251 -37282302 - AluJo SINE Alu -9 303 1 22 25 0 25 chr17 52222251 52222271 -37282282 + AT_rich Low_complexity Low_complexity 19 39 0 1659 119 13 8 chr17 52222278 52222513 -37282040 + AluSx SINE Alu 61 296 -16 1778 179 3 13 chr17 52222646 52222958 -37281595 + AluJb SINE Alu 1 309 -3 259 294 87 24 chr17 52223081 52223207 -37281346 - HAL1 LINE L1 -13 2494 2361 271 246 115 0 chr17 52223253 52223383 -37281170 - L1MC4a LINE L1 -1852 5956 5812 688 246 40 60 chr17 52223571 52223819 -37280734 - L1MC4a LINE L1 -1884 5924 5682 2507 76 0 0 chr17 52224022 52224325 -37280228 + AluY SINE Alu 1 303 -8 2270 85 3 3 chr17 52225358 52225653 -37278900 + AluY SINE Alu 1 295 -16 2019 141 7 7 chr17 52226674 52226979 -37277574 + AluSx SINE Alu 1 305 -7 2063 118 14 3 chr17 52226979 52227267 -37277286 + AluSg1 SINE Alu 1 292 -17 2171 93 52 0 chr17 52227681 52227970 -37276583 - AluSp SINE Alu -7 306 3 1567 181 4 0 chr17 52228386 52228635 -37275918 - AluJo SINE Alu -62 250 1 210 244 0 0 chr17 52229129 52229170 -37275383 + (TG)n Simple_repeat Simple_repeat 2 42 0 723 0 0 0 chr17 52230853 52230935 -37273618 + L1PA2 LINE L1 6074 6155 0 537 172 0 0 chr17 52230939 52231038 -37273515 + L1MB3 LINE L1 6077 6175 -8 2021 118 3 23 chr17 52231216 52231520 -37273033 - AluSx SINE Alu -14 298 1 3666 124 2 40 chr17 52232051 52232599 -37271954 + MER1A DNA MER1_type 1 527 0 354 45 0 0 chr17 52232690 52232734 -37271819 + AluY SINE Alu 1 44 -257 2208 93 7 10 chr17 52232734 52233044 -37271509 + AluSc SINE Alu 1 309 0 2320 196 8 38 chr17 52233253 52233472 -37271081 + L1M4 LINE L1 3833 4057 -2089 1641 187 16 32 chr17 52233472 52233788 -37270765 + AluJb SINE Alu 1 311 -1 2320 196 8 38 chr17 52233788 52234072 -37270481 + L1M4 LINE L1 4057 4321 -1825 2303 186 69 4 chr17 52234446 52234550 -37270003 - MER41B LTR ERV1 -23 597 501 2269 123 0 0 chr17 52234550 52234858 -37269695 + AluSx SINE Alu 3 310 -2 2303 186 69 4 chr17 52234858 52235207 -37269346 - MER41B LTR ERV1 -119 501 132 216 122 0 0 chr17 52235458 52235499 -37269054 + (CCCCCA)n Simple_repeat Simple_repeat 2 42 0 987 59 0 8 chr17 52236958 52237077 -37267476 - AluSg SINE Alu -189 121 4 1129 94 0 0 chr17 52237077 52237276 -37267277 + AluSg/x SINE Alu 133 331 0 210 37 0 0 chr17 52238088 52238115 -37266438 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 716 212 45 96 chr17 52238118 52238316 -37266237 + MIR SINE MIR 5 192 -70 2152 120 3 0 chr17 52238318 52238610 -37265943 + AluSq SINE Alu 1 293 -20 245 222 0 19 chr17 52238683 52238737 -37265816 + GA-rich Low_complexity Low_complexity 4 56 0 382 316 116 7 chr17 52238842 52238997 -37265556 + MIR3 SINE MIR 32 203 -5 694 153 100 20 chr17 52238999 52239149 -37265404 + L1MA10 LINE L1 6169 6330 -4 230 276 67 76 chr17 52239511 52239593 -37264960 - L2 LINE L2 -1 3271 3189 2177 99 0 20 chr17 52239593 52239896 -37264657 + AluY SINE Alu 1 297 -14 230 276 67 76 chr17 52239896 52239918 -37264635 - L2 LINE L2 -83 3189 3168 24 32 0 0 chr17 52240306 52240337 -37264216 + AT_rich Low_complexity Low_complexity 1 31 0 802 147 0 0 chr17 52240337 52240453 -37264100 - AluJb SINE Alu -196 116 1 298 213 0 0 chr17 52240701 52240762 -37263791 - MLT1A1 LTR MaLR -303 62 2 2307 104 3 0 chr17 52240788 52241096 -37263457 + AluSc SINE Alu 1 309 0 2221 115 0 0 chr17 52241113 52241408 -37263145 + AluSg SINE Alu 1 295 -15 304 109 18 0 chr17 52241568 52241623 -37262930 + L1ME4a LINE L1 6062 6117 -4 21 36 0 0 chr17 52241934 52241962 -37262591 + AT_rich Low_complexity Low_complexity 1 28 0 416 286 31 93 chr17 52243140 52243528 -37261025 - L1ME4a LINE L1 -1 6120 5757 23 33 0 0 chr17 52243654 52243684 -37260869 + AT_rich Low_complexity Low_complexity 1 30 0 31 68 0 0 chr17 52246356 52246415 -37258138 + GC_rich Low_complexity Low_complexity 1 59 0 721 153 56 7 chr17 52247068 52247212 -37257341 + L1MD1 LINE L1 6089 6239 -3 921 192 0 12 chr17 52247299 52247471 -37257082 + FRAM SINE Alu 1 170 -6 229 324 151 7 chr17 52247505 52247644 -37256909 - L2 LINE L2 -242 3030 2872 2189 103 0 0 chr17 52248284 52248593 -37255960 + AluSg SINE Alu 1 309 0 286 157 57 43 chr17 52248746 52248816 -37255737 + L1MC3 LINE L1 7702 7772 -13 1473 95 46 102 chr17 52251004 52251289 -37253264 + AluJo SINE Alu 29 297 -15 201 270 10 30 chr17 52251297 52251397 -37253156 + T-rich Low_complexity Low_complexity 2 99 0 2280 106 0 28 chr17 52252153 52252473 -37252080 - AluSq SINE Alu -2 311 1 608 297 62 5 chr17 52253338 52253530 -37251023 + MIR SINE MIR 2 204 -58 2005 139 3 0 chr17 52253562 52253865 -37250688 + AluSx SINE Alu 1 304 -8 787 247 88 5 chr17 52254190 52254428 -37250125 + MIR SINE MIR 9 262 0 182 384 35 0 chr17 52254397 52254483 -37250070 + L2 LINE L2 3212 3300 -13 * 326 262 37 37 chr17 52256574 52256681 -37247872 + MIR3 SINE MIR 6 112 -96 205 83 0 28 chr17 52257208 52257244 -37247309 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 302 228 221 15 chr17 52257346 52257482 -37247071 - MIR3 SINE MIR -8 200 37 231 225 268 0 chr17 52257941 52258012 -37246541 + MIR3 SINE MIR 117 206 -2 188 327 0 0 chr17 52258011 52258066 -37246487 - L3b LINE CR1 -131 1452 1398 * 588 300 168 43 chr17 52258610 52259304 -37245249 + L2 LINE L2 2302 3082 -190 225 150 17 33 chr17 52259356 52259416 -37245137 + HSMAR1 DNA Mariner 1229 1287 0 308 310 46 0 chr17 52259444 52259531 -37245022 + L2 LINE L2 3203 3293 -20 501 283 73 39 chr17 52259638 52259843 -37244710 + L1MC4a LINE L1 5617 5828 -1980 1608 155 29 18 chr17 52260124 52260448 -37244105 + AluJo SINE Alu 1 327 0 662 299 32 5 chr17 52260569 52260756 -37243797 + MIR3 SINE MIR 14 205 -3 1643 168 3 20 chr17 52260882 52261185 -37243368 - AluJo SINE Alu -14 298 1 294 259 0 0 chr17 52261540 52261598 -37242955 + MIR3 SINE MIR 151 208 0 5868 55 22 13 chr17 52261733 52262497 -37242056 + L1PA8 LINE L1 5402 6172 0 699 267 111 0 chr17 52262781 52262961 -37241592 - MIR SINE MIR -51 211 12 376 321 38 38 chr17 52263364 52263495 -37241058 + L2 LINE L2 3141 3271 -1 1750 129 0 0 chr17 52263512 52263768 -37240785 + AluSx SINE Alu 6 261 -51 353 274 129 0 chr17 52264429 52264553 -37240000 - MIR3 SINE MIR -14 194 55 216 0 0 0 chr17 52264585 52264609 -37239944 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2081 110 0 3 chr17 52264611 52264903 -37239650 - AluSg SINE Alu -19 291 1 244 342 13 0 chr17 52265038 52265114 -37239439 - LTR67 LTR ERVL -367 190 114 232 185 31 62 chr17 52265065 52265130 -37239423 - MLT1J LTR MaLR -354 157 95 * 1044 139 10 46 chr17 52265321 52265515 -37239038 - AluJb SINE Alu -6 306 120 544 189 160 0 chr17 52265632 52265738 -37238815 - AluJb SINE Alu -188 124 2 398 279 15 60 chr17 52265747 52265978 -37238575 - L1M4 LINE L1 -756 5390 5172 651 249 133 44 chr17 52266591 52266624 -37237929 + MLT1L LTR MaLR 110 139 -476 1705 212 65 0 chr17 52266624 52266964 -37237589 - MLT1A1 LTR MaLR 0 365 4 651 249 133 44 chr17 52266964 52267309 -37237244 + MLT1L LTR MaLR 139 590 -25 2105 229 124 54 chr17 52267408 52268180 -37236373 + LTR1B LTR ERV1 1 826 0 316 271 106 0 chr17 52268243 52268328 -37236225 - MER5B DNA MER1_type -65 113 20 406 308 93 16 chr17 52268739 52268921 -37235632 - MER117 DNA MER1_type 0 197 2 371 349 8 23 chr17 52268941 52269070 -37235483 + MIR3 SINE MIR 33 159 -49 850 237 19 28 chr17 52270120 52270335 -37234218 - MIR SINE MIR 0 262 50 2575 94 43 10 chr17 52270528 52270922 -37233631 + L1MA2 LINE L1 5894 6300 -4 372 230 108 47 chr17 52270985 52271133 -37233420 - MIR3 SINE MIR -46 162 6 2122 124 3 0 chr17 52271236 52271543 -37233010 - AluSx SINE Alu -4 308 1 537 184 29 0 chr17 52271699 52271802 -37232751 + MER5A DNA MER1_type 1 106 -83 731 173 0 144 chr17 52271808 52272016 -37232537 - MER5A DNA MER1_type -3 186 9 471 295 74 46 chr17 52272644 52272760 -37231793 - L3b LINE CR1 -41 1542 1416 390 225 143 97 chr17 52272760 52273151 -37231402 + MLT1I LTR MaLR 1 409 0 471 295 74 46 chr17 52273151 52273251 -37231302 - L3b LINE CR1 -167 1416 1320 1994 126 7 3 chr17 52273509 52273802 -37230751 + AluSg SINE Alu 1 294 -16 362 259 12 12 chr17 52273913 52273998 -37230555 + L2 LINE L2 3136 3220 -52 477 136 0 0 chr17 52274100 52274166 -37230387 - AluS SINE Alu -246 67 2 2075 176 20 8 chr17 52274305 52274662 -37229891 - MLT1A1 LTR MaLR 0 365 5 1147 114 0 0 chr17 52274773 52274931 -37229622 + AluSg/x SINE Alu 133 290 -20 227 309 124 36 chr17 52274983 52275258 -37229295 - L2 LINE L2 -672 2642 2344 1710 164 3 10 chr17 52275325 52275637 -37228916 + AluJb SINE Alu 1 310 -2 220 68 23 23 chr17 52275864 52275908 -37228645 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 262 143 0 0 chr17 52275910 52275945 -37228608 - Alu SINE Alu -264 36 2 324 305 38 9 chr17 52276931 52277036 -37227517 - L2 LINE L2 -5 3308 3201 402 269 12 138 chr17 52277127 52277241 -37227312 + MIR SINE MIR 19 83 -179 1651 186 3 13 chr17 52277241 52277553 -37227000 - AluJb SINE Alu -3 309 1 402 269 12 138 chr17 52277553 52277703 -37226850 + MIR SINE MIR 83 250 -12 1886 114 11 4 chr17 52278057 52278338 -37226215 + AluSx SINE Alu 3 285 -27 204 40 0 0 chr17 52278338 52278363 -37226190 + (GGAGAA)n Simple_repeat Simple_repeat 5 29 0 2078 100 0 30 chr17 52279145 52279445 -37225108 + AluSg1 SINE Alu 2 292 -17 415 125 263 0 chr17 52279769 52279849 -37224704 + MER5A DNA MER1_type 9 109 -80 527 188 19 97 chr17 52279951 52280105 -37224448 + LTR33 LTR ERVL 1 142 -379 2242 101 0 0 chr17 52280154 52280452 -37224101 + AluSx SINE Alu 1 298 -14 1125 249 126 7 chr17 52280534 52280843 -37223710 + LTR33 LTR ERVL 174 519 -2 249 228 98 73 chr17 52281099 52281189 -37223364 - MER63 DNA MER1_type -11 1049 954 2147 121 0 0 chr17 52281189 52281495 -37223058 + AluSq SINE Alu 1 306 -7 249 228 98 73 chr17 52281495 52281527 -37223026 - MER63 DNA MER1_type -106 954 924 204 241 0 0 chr17 52281528 52281586 -37222967 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 1460 125 0 0 chr17 52281625 52281833 -37222720 - AluSx SINE Alu -99 213 6 430 168 75 28 chr17 52281845 52281952 -37222601 - MER63 DNA MER1_type -128 932 821 1910 134 24 0 chr17 52282138 52282429 -37222124 - AluSx SINE Alu -14 298 1 273 207 110 61 chr17 52282549 52282631 -37221922 + MIR SINE MIR 67 152 -110 259 314 113 0 chr17 52283065 52283189 -37221364 - MIR SINE MIR -60 202 65 1703 149 43 17 chr17 52283190 52283491 -37221062 + AluJb SINE Alu 1 309 -3 516 301 14 55 chr17 52283772 52283991 -37220562 - MIR SINE MIR -27 235 26 715 164 0 79 chr17 52335686 52335826 -37168727 + FLAM_C SINE Alu 4 132 -1 21 0 0 0 chr17 52335928 52335949 -37168604 + AT_rich Low_complexity Low_complexity 1 21 0 1806 115 0 15 chr17 52336094 52336379 -37168174 + AluJb SINE Alu 29 309 0 189 147 0 0 chr17 52337026 52337060 -37167493 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1802 150 6 13 chr17 52338129 52338408 -37166145 + AluJb SINE Alu 1 279 -33 180 0 0 0 chr17 52338408 52338428 -37166125 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1802 150 6 13 chr17 52338428 52338462 -37166091 + AluJb SINE Alu 279 312 0 490 29 0 0 chr17 52338469 52338588 -37165965 + AluY SINE Alu 243 361 0 325 234 78 78 chr17 52342082 52342236 -37162317 - L1MEd LINE L1 -5009 1110 957 1858 163 3 10 chr17 52343205 52343511 -37161042 - AluSx SINE Alu -8 304 1 1559 127 47 36 chr17 52344202 52344477 -37160076 + AluJo SINE Alu 24 301 -11 2178 71 21 3 chr17 52345126 52345409 -37159144 + AluSx SINE Alu 11 298 -14 1019 167 0 6 chr17 52345441 52345609 -37158944 - AluJb SINE Alu -2 310 144 303 278 43 99 chr17 52345757 52345794 -37158759 + MIR SINE MIR 36 74 -188 1858 163 3 3 chr17 52345794 52346094 -37158459 - AluSx SINE Alu -12 300 1 303 278 43 99 chr17 52346094 52346218 -37158335 + MIR SINE MIR 74 188 -74 2156 131 0 0 chr17 52346350 52346662 -37157891 + AluSx SINE Alu 1 312 0 441 0 0 0 chr17 52346664 52346713 -37157840 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 209 366 71 9 chr17 52346935 52347047 -37157506 + L3b LINE CR1 1338 1456 -127 2444 50 0 3 chr17 52347363 52347660 -37156893 - AluY SINE Alu -15 296 1 867 179 0 0 chr17 52348387 52348527 -37156026 + AluJ SINE Alu 1 140 -172 29 0 0 0 chr17 52348527 52348556 -37155997 + AT_rich Low_complexity Low_complexity 1 29 0 2034 120 0 0 chr17 52348556 52348865 -37155688 + AluSx SINE Alu 1 309 0 2121 108 10 0 chr17 52348868 52349164 -37155389 + AluSq SINE Alu 1 299 -14 916 212 0 0 chr17 52349164 52349329 -37155224 + AluJ SINE Alu 134 298 -14 284 296 23 0 chr17 52349481 52349569 -37154984 - MIR3 SINE MIR -28 180 91 1241 122 0 0 chr17 52350180 52350352 -37154201 + AluSq SINE Alu 54 225 -88 517 215 174 20 chr17 52350684 52350833 -37153720 - MER5A DNA MER1_type 0 189 18 29 0 0 0 chr17 52352292 52352321 -37152232 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr17 52353905 52353947 -37150606 + GC_rich Low_complexity Low_complexity 1 42 0 204 200 0 0 chr17 52354797 52354832 -37149721 + polypurine Low_complexity Low_complexity 2 36 0 216 184 0 20 chr17 52355120 52355169 -37149384 + (CGG)n Simple_repeat Simple_repeat 1 48 0 234 91 0 0 chr17 52356555 52356588 -37147965 + (A)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr17 52356679 52356701 -37147852 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 52356981 52357001 -37147552 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr17 52360128 52360159 -37144394 + AT_rich Low_complexity Low_complexity 1 31 0 399 132 0 0 chr17 52361593 52361661 -37142892 + (CCG)n Simple_repeat Simple_repeat 2 69 0 217 205 0 0 chr17 52363062 52363101 -37141452 + C-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr17 52363289 52363312 -37141241 + AT_rich Low_complexity Low_complexity 1 23 0 221 180 20 0 chr17 52364821 52364871 -37139682 + (TAA)n Simple_repeat Simple_repeat 2 52 0 545 129 35 0 chr17 52365773 52365889 -37138664 + GA-rich Low_complexity Low_complexity 2 121 0 29 0 0 0 chr17 52366149 52366178 -37138375 + GC_rich Low_complexity Low_complexity 1 29 0 207 88 0 0 chr17 52366458 52366492 -37138061 + (CA)n Simple_repeat Simple_repeat 1 34 0 191 122 0 24 chr17 52369389 52369430 -37135123 + (TG)n Simple_repeat Simple_repeat 1 40 0 * 201 147 0 0 chr17 52369429 52369463 -37135090 + (GA)n Simple_repeat Simple_repeat 1 34 0 1898 73 8 0 chr17 52371425 52371671 -37132882 + AluSp SINE Alu 39 286 -27 522 0 0 0 chr17 52371671 52371729 -37132824 + (CA)n Simple_repeat Simple_repeat 2 59 0 420 257 9 18 chr17 52372124 52372233 -37132320 - MIR3 SINE MIR -17 191 84 369 198 102 130 chr17 52372241 52372418 -37132135 + MIR3 SINE MIR 30 201 -7 23 54 0 0 chr17 52374745 52374782 -37129771 + GC_rich Low_complexity Low_complexity 1 37 0 218 32 32 0 chr17 52374918 52374949 -37129604 + (CCCCCG)n Simple_repeat Simple_repeat 1 32 0 273 167 0 0 chr17 52379112 52379166 -37125387 + (CA)n Simple_repeat Simple_repeat 1 54 0 279 133 0 0 chr17 52379233 52379278 -37125275 + (GA)n Simple_repeat Simple_repeat 2 46 0 348 161 0 0 chr17 52379520 52379582 -37124971 + CT-rich Low_complexity Low_complexity 1 62 0 186 171 0 0 chr17 52382494 52382535 -37122018 + CT-rich Low_complexity Low_complexity 2 42 0 198 0 0 0 chr17 52383624 52383646 -37120907 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 207 114 0 0 chr17 52386173 52386208 -37118345 + (TAA)n Simple_repeat Simple_repeat 2 36 0 183 259 0 0 chr17 52386917 52386975 -37117578 + T-rich Low_complexity Low_complexity 1 58 0 234 62 0 0 chr17 52388028 52388060 -37116493 + (TCC)n Simple_repeat Simple_repeat 1 32 0 210 156 0 0 chr17 52388559 52388604 -37115949 + (CGG)n Simple_repeat Simple_repeat 2 46 0 198 0 0 0 chr17 52390816 52390838 -37113715 + (T)n Simple_repeat Simple_repeat 1 22 0 25 51 0 0 chr17 52392806 52392845 -37111708 + GC_rich Low_complexity Low_complexity 1 39 0 204 219 0 31 chr17 52395406 52395470 -37109083 + C-rich Low_complexity Low_complexity 6 67 0 257 80 0 40 chr17 52398283 52398333 -37106220 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 180 0 0 0 chr17 52401314 52401334 -37103219 + (T)n Simple_repeat Simple_repeat 1 20 0 28 29 0 0 chr17 52402487 52402522 -37102031 + AT_rich Low_complexity Low_complexity 1 35 0 303 203 0 0 chr17 52406269 52406333 -37098220 + (TTA)n Simple_repeat Simple_repeat 3 66 0 216 215 15 31 chr17 52407658 52407723 -37096830 + CT-rich Low_complexity Low_complexity 5 68 0 336 19 57 0 chr17 52411490 52411543 -37093010 + (TG)n Simple_repeat Simple_repeat 1 56 0 216 67 0 0 chr17 52412883 52412913 -37091640 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 220 229 0 0 chr17 52413978 52414026 -37090527 + T-rich Low_complexity Low_complexity 104 151 0 215 233 0 14 chr17 52415316 52415389 -37089164 + CT-rich Low_complexity Low_complexity 4 75 0 214 235 20 0 chr17 52416845 52416896 -37087657 + A-rich Low_complexity Low_complexity 1 52 0 205 294 0 0 chr17 52417295 52417363 -37087190 + (TG)n Simple_repeat Simple_repeat 1 68 0 219 103 0 0 chr17 52418207 52418246 -37086307 + (T)n Simple_repeat Simple_repeat 1 39 0 237 209 45 15 chr17 52418296 52418363 -37086190 + CT-rich Low_complexity Low_complexity 5 73 0 2516 51 0 6 chr17 52418644 52418957 -37085596 + AluY SINE Alu 1 311 0 246 128 0 0 chr17 52422118 52422157 -37082396 + (A)n Simple_repeat Simple_repeat 1 39 0 269 131 16 0 chr17 52423201 52423262 -37081291 + GA-rich Low_complexity Low_complexity 1 62 0 35 54 0 0 chr17 52423632 52423688 -37080865 + GC_rich Low_complexity Low_complexity 1 56 0 180 77 0 0 chr17 52424041 52424067 -37080486 + (GGGGA)n Simple_repeat Simple_repeat 4 29 0 231 0 50 25 chr17 52424616 52424656 -37079897 + (GAAA)n Simple_repeat Simple_repeat 1 41 0 182 150 25 0 chr17 52425275 52425315 -37079238 + G-rich Low_complexity Low_complexity 3 43 0 187 160 60 0 chr17 52425353 52425403 -37079150 + GA-rich Low_complexity Low_complexity 5 57 0 368 256 6 0 chr17 52425731 52425903 -37078650 + GA-rich Low_complexity Low_complexity 2 174 0 191 88 29 0 chr17 52426647 52426681 -37077872 + (CCCTG)n Simple_repeat Simple_repeat 1 35 0 351 0 0 0 chr17 52429738 52429777 -37074776 + (TG)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 52434727 52434748 -37069805 + AT_rich Low_complexity Low_complexity 1 21 0 201 191 0 48 chr17 52436097 52436139 -37068414 + C-rich Low_complexity Low_complexity 1 40 0 215 132 0 26 chr17 52437311 52437349 -37067204 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 198 263 92 26 chr17 52441375 52441451 -37063102 - L3 LINE CR1 -7 1570 1490 2372 63 10 0 chr17 52444694 52444994 -37059559 - AluSg SINE Alu -7 303 1 243 0 0 0 chr17 52447034 52447061 -37057492 + (T)n Simple_repeat Simple_repeat 1 27 0 295 300 7 31 chr17 52447445 52447573 -37056980 - MIR SINE MIR -26 182 55 219 69 0 0 chr17 52448925 52448954 -37055599 + (CA)n Simple_repeat Simple_repeat 1 29 0 296 287 70 77 chr17 52448978 52449121 -37055432 + MIR SINE MIR 119 260 -2 377 179 0 39 chr17 52449699 52449777 -37054776 - L2 LINE L2 -1 3312 3238 222 191 0 0 chr17 52452229 52452271 -37052282 + (CGG)n Simple_repeat Simple_repeat 2 43 0 866 78 21 7 chr17 52457536 52457678 -37046875 + (GA)n Simple_repeat Simple_repeat 1 144 0 221 236 146 0 chr17 52458507 52458596 -37045957 + MIR SINE MIR 44 145 -63 598 204 14 21 chr17 52458618 52458760 -37045793 - L1M4 LINE L1 -3580 2566 2426 2019 117 3 0 chr17 52458797 52459087 -37045466 - AluSx SINE Alu -21 291 1 2251 79 30 3 chr17 52459267 52459572 -37044981 - AluSp SINE Alu 0 313 1 1094 56 14 0 chr17 52459573 52459716 -37044837 - AluSp SINE Alu -168 145 1 1797 227 84 36 chr17 52459806 52460366 -37044187 - L1ME3 LINE L1 -56 6106 5520 236 291 139 0 chr17 52460413 52460499 -37044054 - L1ME3 LINE L1 -834 5525 5428 180 0 0 0 chr17 52460523 52460543 -37044010 + (T)n Simple_repeat Simple_repeat 1 20 0 3826 160 27 26 chr17 52460555 52461090 -37043463 - L1MB2 LINE L1 -7 6164 5631 2141 95 3 0 chr17 52461090 52461416 -37043137 + AluSq SINE Alu 1 327 0 3826 160 27 26 chr17 52461416 52461564 -37042989 - L1MB2 LINE L1 -540 5631 5476 216 0 0 0 chr17 52461564 52461588 -37042965 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3826 160 27 26 chr17 52461588 52461638 -37042915 - L1MB2 LINE L1 -695 5476 5428 2408 63 0 0 chr17 52461650 52461952 -37042601 - AluY SINE Alu -9 302 1 1208 121 0 0 chr17 52461952 52462125 -37042428 - AluJo/FRAM SINE Alu -9 303 131 226 205 0 0 chr17 52462128 52462167 -37042386 - AluJ/monomer SINE Alu -261 40 2 3484 227 55 30 chr17 52462167 52462201 -37042352 - L1MEc LINE L1 -2636 3579 3547 2251 84 3 0 chr17 52462201 52462498 -37042055 + AluSp SINE Alu 2 299 -14 3484 227 55 30 chr17 52462498 52463611 -37040942 - L1MEc LINE L1 -2668 3547 2403 321 287 35 11 chr17 52463662 52463749 -37040804 + L1MC4 LINE L1 6615 6703 -1339 194 103 0 26 chr17 52463749 52463774 -37040779 + (TA)n Simple_repeat Simple_repeat 2 27 -12 1632 138 18 14 chr17 52463774 52463903 -37040650 + AluSx SINE Alu 7 134 -178 2116 106 20 0 chr17 52463903 52464204 -37040349 + AluSx SINE Alu 2 308 -4 1632 138 18 14 chr17 52464204 52464356 -37040197 + AluSx SINE Alu 134 289 -23 194 103 0 26 chr17 52464356 52464369 -37040184 + (TA)n Simple_repeat Simple_repeat 27 39 0 431 208 88 0 chr17 52464370 52464495 -37040058 - L1MEc LINE L1 -3943 2453 2318 897 99 0 0 chr17 52464495 52464641 -37039912 - AluY SINE Alu 0 308 163 878 184 81 75 chr17 52464641 52464815 -37039738 - L1MEc LINE L1 -4073 2323 2152 2224 106 0 0 chr17 52464815 52465127 -37039426 - AluSq SINE Alu -1 312 1 878 184 81 75 chr17 52465127 52465209 -37039344 - L1MEc LINE L1 -4244 2152 2062 1241 193 58 106 chr17 52465209 52465249 -37039304 - MLT2D LTR ERVL 0 414 374 324 70 0 0 chr17 52465249 52465292 -37039261 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 1241 193 58 106 chr17 52465292 52465686 -37038867 - MLT2D LTR ERVL -40 374 1 878 184 81 75 chr17 52465686 52465749 -37038804 - L1MEc LINE L1 -4334 2062 2001 985 180 0 0 chr17 52465749 52465927 -37038626 + FRAM SINE Alu 1 175 -1 484 231 123 10 chr17 52465927 52466122 -37038431 - L1MEc LINE L1 -4390 2006 1790 932 262 78 7 chr17 52466201 52466510 -37038043 - L1MC4a LINE L1 0 7808 7478 1229 228 115 16 chr17 52466513 52466895 -37037658 - LTR52 LTR ERVL -1 420 1 7005 164 25 5 chr17 52466895 52468009 -37036544 - LTR52-int LTR ERVL 0 3556 2421 1498 132 14 69 chr17 52468015 52468184 -37036369 - LTR52-int LTR ERVL -1074 2482 2334 1949 128 0 13 chr17 52468184 52468488 -37036065 + AluSx SINE Alu 1 300 -12 1498 132 14 69 chr17 52468488 52468607 -37035946 - LTR52-int LTR ERVL -1222 2334 2210 294 261 33 11 chr17 52468690 52468782 -37035771 - LTR52-int LTR ERVL -1480 2076 1983 813 167 0 8 chr17 52468788 52468920 -37035633 + FAM SINE Alu 29 159 -26 2335 81 0 3 chr17 52468931 52469241 -37035312 - AluY SINE Alu -2 309 1 1490 173 73 4 chr17 52469262 52469534 -37035019 - LTR52-int LTR ERVL -1562 1994 1704 2802 208 105 35 chr17 52469552 52469603 -37034950 - MER21B LTR ERV1 -51 812 766 2429 107 30 28 chr17 52469603 52469966 -37034587 + THE1B LTR MaLR 1 364 0 2802 208 105 35 chr17 52469966 52470636 -37033917 - MER21B LTR ERV1 -97 766 40 1573 163 39 103 chr17 52470638 52470792 -37033761 - LTR52-int LTR ERVL -1867 1689 1527 1623 168 0 14 chr17 52470792 52471083 -37033470 + AluJb SINE Alu 1 287 -25 1573 163 39 103 chr17 52471083 52471334 -37033219 - LTR52-int LTR ERVL -2029 1527 1310 1892 95 84 0 chr17 52471348 52471632 -37032921 - AluSg SINE Alu -2 308 1 1014 90 0 8 chr17 52471635 52471768 -37032785 - AluSq/x SINE Alu -180 132 1 1012 139 95 137 chr17 52471768 52471910 -37032643 - LTR52-int LTR ERVL -2425 1131 985 315 0 0 0 chr17 52471910 52471945 -37032608 + (TG)n Simple_repeat Simple_repeat 2 36 0 1012 139 95 137 chr17 52471945 52472072 -37032481 - LTR52-int LTR ERVL -2571 985 876 2289 87 0 3 chr17 52472072 52472384 -37032169 - AluY SINE Alu 0 311 1 1012 139 95 137 chr17 52472384 52472450 -37032103 - LTR52-int LTR ERVL -2680 876 809 1196 173 18 0 chr17 52472450 52472675 -37031878 - AluJo SINE Alu 0 312 84 1680 136 29 0 chr17 52472678 52472950 -37031603 - AluSx SINE Alu -11 301 22 1557 171 27 38 chr17 52472982 52473157 -37031396 - AluJo SINE Alu -23 289 117 2248 93 7 0 chr17 52473157 52473458 -37031095 - AluSc SINE Alu -6 303 1 1557 171 27 38 chr17 52473458 52473574 -37030979 - AluJo SINE Alu -195 117 1 669 149 5 108 chr17 52473574 52473760 -37030793 - LTR52-int LTR ERVL -2735 821 654 2194 221 10 10 chr17 52473784 52474275 -37030278 - LTR52-int LTR ERVL -3030 526 3 1210 193 42 109 chr17 52474275 52474611 -37029942 - LTR52 LTR ERVL -1 420 119 1940 134 3 0 chr17 52474611 52474922 -37029631 - AluSx SINE Alu 0 312 1 1210 193 42 109 chr17 52474922 52475034 -37029519 - LTR52 LTR ERVL -302 119 1 541 245 52 13 chr17 52475034 52475189 -37029364 - L1MC4a LINE L1 -337 7471 7311 377 386 0 183 chr17 52475210 52475366 -37029187 - L1MDa LINE L1 -4652 1563 1368 435 52 0 0 chr17 52475366 52475424 -37029129 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1809 154 0 14 chr17 52475426 52475574 -37028979 - AluSx SINE Alu -31 281 137 2002 115 20 7 chr17 52475574 52475870 -37028683 - AluSq SINE Alu -13 300 1 1809 154 0 14 chr17 52475870 52476006 -37028547 - AluSx SINE Alu -175 137 1 1818 149 3 31 chr17 52476008 52476329 -37028224 - AluSx SINE Alu 0 312 1 377 386 0 183 chr17 52476329 52476863 -37027690 - L1MDa LINE L1 -4849 1366 745 381 118 0 0 chr17 52476874 52476925 -37027628 + AluSp SINE Alu 121 171 -132 618 116 0 53 chr17 52476925 52477047 -37027506 + AluSg/x SINE Alu 202 310 0 1435 285 41 49 chr17 52477055 52477690 -37026863 - L1MDa LINE L1 -5658 738 109 1942 138 0 0 chr17 52477801 52478111 -37026442 + AluSx SINE Alu 1 310 0 2075 115 3 3 chr17 52478225 52478513 -37026040 - AluSx SINE Alu -24 288 1 1010 304 56 3 chr17 52478631 52478986 -37025567 - L2 LINE L2 -385 2929 2556 2264 69 16 7 chr17 52479109 52479413 -37025140 - AluY SINE Alu -4 307 1 1794 191 49 6 chr17 52479820 52480170 -37024383 + MLT1A1 LTR MaLR 1 365 0 1729 160 46 57 chr17 52480362 52480439 -37024114 + MER7A DNA MER2_type 3 79 -2959 2133 108 0 0 chr17 52480439 52480734 -37023819 + AluSp SINE Alu 1 295 -18 1729 160 46 57 chr17 52480734 52481006 -37023547 + MER7A DNA MER2_type 79 346 0 242 54 0 27 chr17 52481014 52481051 -37023502 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 243 278 28 28 chr17 52481051 52481066 -37023487 + MER112 DNA MER1_type 153 167 -93 1619 168 13 32 chr17 52481066 52481382 -37023171 - AluJb SINE Alu -2 310 1 243 278 28 28 chr17 52481382 52481474 -37023079 + MER112 DNA MER1_type 166 260 0 345 226 195 63 chr17 52481683 52481842 -37022711 + MIR SINE MIR 83 262 0 414 39 0 0 chr17 52481842 52481894 -37022659 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 2126 37 41 0 chr17 52481896 52482164 -37022389 - AluY SINE Alu -32 279 1 213 226 75 0 chr17 52482507 52482560 -37021993 - L3 LINE CR1 -207 1370 1314 351 217 12 48 chr17 52482587 52482670 -37021883 + L2 LINE L2 3186 3265 -7 230 202 214 0 chr17 52482826 52482910 -37021643 - L3 LINE CR1 -262 1315 1214 661 235 84 6 chr17 52483045 52483211 -37021342 - MIR SINE MIR -66 196 18 199 167 48 0 chr17 52483262 52483304 -37021249 - MIR SINE MIR -35 227 184 4261 164 59 49 chr17 52483448 52483488 -37021065 + L1MB7 LINE L1 4677 4715 -1469 1808 119 0 80 chr17 52483488 52483815 -37020738 + AluJb SINE Alu 1 301 -11 4261 164 59 49 chr17 52483815 52484354 -37020199 + L1MB7 LINE L1 4715 5247 -937 1456 179 27 24 chr17 52484354 52484651 -37019902 - AluJo SINE Alu -14 298 1 4261 164 59 49 chr17 52484651 52484783 -37019770 + L1MB7 LINE L1 5247 5376 -808 2183 119 0 0 chr17 52484783 52485086 -37019467 + AluSq SINE Alu 1 303 -10 4261 164 59 49 chr17 52485086 52485365 -37019188 + L1MB7 LINE L1 5376 5651 -533 1849 161 3 0 chr17 52485365 52485663 -37018890 + AluJo SINE Alu 1 299 -13 2127 127 0 0 chr17 52485668 52485967 -37018586 + AluSx SINE Alu 1 299 -13 4261 164 59 49 chr17 52485967 52486030 -37018523 + L1MB7 LINE L1 5654 5715 -469 2050 116 46 38 chr17 52486030 52486402 -37018151 - THE1C LTR MaLR 0 375 1 4261 164 59 49 chr17 52486402 52486802 -37017751 + L1MB7 LINE L1 5715 6168 -16 2736 123 38 60 chr17 52486848 52487403 -37017150 - Charlie1 DNA MER1_type -4 2757 2215 1024 164 53 0 chr17 52487426 52487615 -37016938 - AluJb SINE Alu -13 299 101 480 72 0 0 chr17 52487617 52487686 -37016867 + (TTCC)n Simple_repeat Simple_repeat 2 70 0 1686 180 0 0 chr17 52487688 52487966 -37016587 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 52488333 52488363 -37016190 + AT_rich Low_complexity Low_complexity 1 30 0 342 0 0 0 chr17 52488478 52488516 -37016037 + (TC)n Simple_repeat Simple_repeat 1 38 0 628 192 32 16 chr17 52489379 52489504 -37015049 + MIR SINE MIR 19 145 -63 244 217 209 27 chr17 52489567 52489680 -37014873 - MIR SINE MIR -67 141 25 274 295 171 0 chr17 52489858 52489963 -37014590 + L2 LINE L2 3188 3310 -3 1884 148 10 0 chr17 52491009 52491307 -37013246 + AluJb SINE Alu 1 301 -11 280 210 16 32 chr17 52491307 52491369 -37013184 - MLT1K LTR MaLR -351 237 177 300 331 64 40 chr17 52491484 52491735 -37012818 + L2 LINE L2 2301 2557 -757 299 113 38 0 chr17 52491811 52491864 -37012689 - Alu SINE Alu 0 301 247 1100 91 0 0 chr17 52491864 52492007 -37012546 - AluSq/x SINE Alu -169 143 1 283 213 27 53 chr17 52492007 52492082 -37012471 + L2 LINE L2 2616 2688 -626 425 201 79 85 chr17 52492111 52492143 -37012410 - L1ME4a LINE L1 -1 6120 6089 1365 199 52 3 chr17 52492143 52492430 -37012123 + AluJb SINE Alu 1 301 -11 425 201 79 85 chr17 52492430 52492586 -37011967 - L1ME4a LINE L1 -32 6089 5933 942 175 71 156 chr17 52492725 52493058 -37011495 - MLT1C LTR MaLR 0 467 168 1454 142 120 4 chr17 52493058 52493332 -37011221 + AluJo SINE Alu 1 306 -6 942 175 71 156 chr17 52493332 52493376 -37011177 - MLT1C LTR MaLR -299 168 122 1297 179 0 5 chr17 52493381 52493604 -37010949 - AluJo SINE Alu -82 230 9 627 106 19 48 chr17 52493604 52493708 -37010845 - MLT1C LTR MaLR -366 101 1 262 345 11 0 chr17 52493710 52493797 -37010756 + L2 LINE L2 2966 3053 -219 825 169 0 0 chr17 52494018 52494142 -37010411 + FLAM_C SINE Alu 2 125 -18 627 264 93 77 chr17 52494142 52494495 -37010058 - MLT1J LTR MaLR -46 465 107 1028 201 23 129 chr17 52494537 52494596 -37009957 + MER46C DNA MER2_type 2 66 -272 414 0 0 0 chr17 52494596 52494642 -37009911 + (TG)n Simple_repeat Simple_repeat 2 47 0 1497 202 3 3 chr17 52494644 52494931 -37009622 - AluJb SINE Alu -10 302 16 1028 201 23 129 chr17 52494931 52495217 -37009336 + MER46C DNA MER2_type 67 313 -25 972 327 83 37 chr17 52495199 52495609 -37008944 + MER115 DNA AcHobo 11 439 -254 * 180 111 0 0 chr17 52495676 52495703 -37008850 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 726 152 0 9 chr17 52495710 52495822 -37008731 - FLAM_C SINE Alu -26 117 7 319 186 14 14 chr17 52495839 52495909 -37008644 + MER115 DNA AcHobo 579 648 -45 2202 85 0 0 chr17 52495948 52496262 -37008291 - AluSx SINE Alu 0 314 1 199 217 0 22 chr17 52496335 52496381 -37008172 + L2 LINE L2 3264 3308 -5 758 128 8 0 chr17 52496662 52496787 -37007766 + L1MA4A LINE L1 5998 6123 -180 423 211 0 2 chr17 52496775 52496881 -37007672 + L1MA4A LINE L1 6044 6269 -8 * 1736 134 21 7 chr17 52496893 52497176 -37007377 + AluJo SINE Alu 1 287 -25 306 83 283 0 chr17 52497197 52497257 -37007296 + FRAM SINE Alu 21 97 -69 315 0 0 0 chr17 52497258 52497293 -37007260 + (TG)n Simple_repeat Simple_repeat 2 36 0 317 235 0 82 chr17 52497305 52497403 -37007150 - L1MC4 LINE L1 -1339 6703 6614 304 295 48 19 chr17 52497454 52497559 -37006994 - L1MC4 LINE L1 -1339 6703 6596 355 192 0 91 chr17 52497579 52497678 -37006875 - L1MC4 LINE L1 -1339 6703 6614 297 0 0 0 chr17 52497678 52497711 -37006842 + (CA)n Simple_repeat Simple_repeat 2 34 0 359 122 326 10 chr17 52497711 52497809 -37006744 - AluJo SINE Alu -72 230 102 279 203 0 0 chr17 52497811 52497870 -37006683 + (TA)n Simple_repeat Simple_repeat 2 60 0 180 204 68 0 chr17 52498305 52498349 -37006204 - L3 LINE CR1 -110 1467 1421 1613 161 70 0 chr17 52498471 52498756 -37005797 - AluJo SINE Alu -7 305 1 2066 120 0 0 chr17 52498869 52499190 -37005363 - AluSx SINE Alu 0 321 1 1714 126 76 7 chr17 52499192 52499469 -37005084 - AluSx SINE Alu -16 296 1 224 261 0 0 chr17 52499754 52499800 -37004753 + polypyrimidine Low_complexity Low_complexity 3 48 0 231 217 65 0 chr17 52499889 52499935 -37004618 - MLT1K LTR MaLR -398 190 142 331 325 89 35 chr17 52500046 52500203 -37004350 + L1MC4a LINE L1 5764 5932 -1876 1788 170 3 0 chr17 52500203 52500503 -37004050 - AluJo SINE Alu -11 301 1 331 325 89 35 chr17 52500503 52500514 -37004039 + L1MC4a LINE L1 5932 5941 -1867 314 288 63 0 chr17 52500675 52500786 -37003767 - L1MC4 LINE L1 -1 8041 7924 664 135 16 40 chr17 52500842 52500968 -37003585 - L1MD1 LINE L1 0 6242 6120 691 154 7 77 chr17 52501131 52501274 -37003279 - L1MD1 LINE L1 -123 6119 5987 996 173 0 5 chr17 52501296 52501481 -37003072 - AluJ SINE Alu 0 312 129 21 0 0 0 chr17 52501483 52501504 -37003049 + AT_rich Low_complexity Low_complexity 1 21 0 779 150 8 0 chr17 52502208 52502328 -37002225 - AluJ SINE Alu -190 122 2 4134 143 35 28 chr17 52502328 52502737 -37001816 - L1MD1 LINE L1 -239 6003 5598 1543 159 43 7 chr17 52502737 52503013 -37001540 + AluJb SINE Alu 1 286 -26 4134 143 35 28 chr17 52503013 52503566 -37000987 - L1MD1 LINE L1 -644 5598 5031 1255 189 161 0 chr17 52503570 52503830 -37000723 - AluJb SINE Alu 0 302 1 1770 202 29 69 chr17 52705206 52705697 -36798856 - L1ME2 LINE L1 -213 5951 5481 954 105 0 0 chr17 52705697 52705830 -36798723 - AluSg/x SINE Alu -4 308 176 337 193 294 0 chr17 52705831 52705950 -36798603 - L1ME2 LINE L1 -679 5483 5330 895 178 0 24 chr17 52705961 52706130 -36798423 - AluJo/FRAM SINE Alu -15 297 133 2178 95 0 0 chr17 52706131 52706414 -36798139 - AluSx SINE Alu -15 297 15 1913 72 0 0 chr17 52706417 52706654 -36797899 - AluSc SINE Alu -72 237 1 1914 116 34 0 chr17 52706688 52706980 -36797573 - AluSx SINE Alu -10 302 1 844 147 7 0 chr17 52707200 52707336 -36797217 + AluSq/x SINE Alu 15 151 -161 622 133 20 0 chr17 52707504 52707602 -36796951 - AluSq/x SINE Alu -175 137 38 277 182 0 0 chr17 52707617 52707718 -36796835 + Alu SINE Alu 239 339 0 1853 121 54 4 chr17 52707730 52708010 -36796543 + AluSx SINE Alu 1 294 -18 957 261 68 7 chr17 52708495 52708805 -36795748 + LTR47B LTR ERVL 17 345 -98 265 125 0 0 chr17 52708956 52708996 -36795557 - Alu SINE Alu -10 291 252 2410 80 0 0 chr17 52709012 52709324 -36795229 - AluSx SINE Alu 0 312 1 679 154 46 15 chr17 52709345 52709475 -36795078 - L1PA16 LINE L1 -8 6158 6025 552 188 17 17 chr17 52709686 52709803 -36794750 - FRAM SINE Alu -19 157 41 255 184 0 0 chr17 52710046 52710095 -36794458 - MIR3 SINE MIR -5 203 155 1729 175 0 3 chr17 52710096 52710405 -36794148 + AluJo SINE Alu 1 308 -4 2077 86 4 0 chr17 52710416 52710695 -36793858 + AluSp SINE Alu 1 280 -33 771 186 21 0 chr17 52710807 52710952 -36793601 + FAM SINE Alu 3 150 -35 477 229 9 19 chr17 52710952 52711057 -36793496 - MER63 DNA MER1_type -332 730 1 2060 112 7 0 chr17 52711190 52711484 -36793069 + AluSq SINE Alu 1 296 -17 2165 99 0 3 chr17 52711486 52711788 -36792765 + AluSp SINE Alu 3 303 -10 2082 139 0 0 chr17 52711998 52712308 -36792245 + AluSx SINE Alu 1 310 -2 1865 131 17 3 chr17 52712313 52712610 -36791943 + AluSx SINE Alu 1 301 -11 1875 110 59 3 chr17 52712621 52712910 -36791643 + AluSq SINE Alu 1 305 -8 2153 112 3 0 chr17 52712910 52713214 -36791339 + AluSp SINE Alu 1 305 -8 353 222 0 12 chr17 52713218 52713299 -36791254 - MLT1J LTR MaLR -15 496 417 1232 70 13 0 chr17 52713305 52713461 -36791092 + U1 snRNA snRNA 1 158 -7 29 0 0 0 chr17 52713463 52713492 -36791061 + AT_rich Low_complexity Low_complexity 1 29 0 1761 110 17 53 chr17 52713497 52713797 -36790756 + AluSx SINE Alu 14 302 -10 513 176 0 0 chr17 52714033 52714124 -36790429 - FLAM_A SINE Alu -7 135 45 783 155 0 39 chr17 52714136 52714265 -36790288 - FLAM_C SINE Alu -18 125 2 1191 108 0 0 chr17 52714271 52714437 -36790116 - AluSp SINE Alu -10 303 138 1134 121 6 22 chr17 52714457 52714639 -36789914 + AluSp SINE Alu 121 299 -14 583 237 0 8 chr17 52714705 52714823 -36789730 + FLAM_C SINE Alu 1 117 -16 2251 70 7 3 chr17 52714838 52715139 -36789414 - AluY SINE Alu -2 309 8 1938 111 10 7 chr17 52715263 52715560 -36788993 + AluSx SINE Alu 9 306 -6 2015 114 3 32 chr17 52715636 52715951 -36788602 + AluSx SINE Alu 1 306 -6 1921 152 0 3 chr17 52716631 52716940 -36787613 - AluSx SINE Alu -4 308 1 1624 167 10 3 chr17 52717138 52717432 -36787121 + AluJo SINE Alu 1 296 -16 2275 88 0 0 chr17 52717432 52717729 -36786824 + AluSg SINE Alu 1 297 -13 2129 117 0 3 chr17 52717730 52718039 -36786514 + AluSg SINE Alu 1 308 -2 2284 88 16 0 chr17 52718318 52718625 -36785928 + AluSx SINE Alu 1 312 0 2252 85 3 0 chr17 52718799 52719094 -36785459 + AluSp SINE Alu 3 298 -15 629 182 26 168 chr17 52719104 52719276 -36785277 + L1ME1 LINE L1 4835 5030 -1116 2021 80 13 50 chr17 52719276 52719578 -36784975 + AluSp SINE Alu 3 293 -20 629 182 26 168 chr17 52719578 52719676 -36784877 + L1ME1 LINE L1 5030 5050 -1096 2199 121 0 0 chr17 52719676 52719982 -36784571 + AluSx SINE Alu 1 306 -6 629 182 26 168 chr17 52719982 52720050 -36784503 + L1ME1 LINE L1 5050 5126 -1020 738 160 7 35 chr17 52720058 52720202 -36784351 + FLAM_C SINE Alu 1 140 -3 2347 182 48 82 chr17 52720260 52720279 -36784274 + L1ME1 LINE L1 5103 5121 -1045 480 35 0 0 chr17 52720279 52720337 -36784216 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 2347 182 48 82 chr17 52720337 52720405 -36784148 + L1ME1 LINE L1 5121 5190 -976 1608 154 3 50 chr17 52720405 52720558 -36783995 + AluJb SINE Alu 1 133 -179 2175 59 42 10 chr17 52720558 52720847 -36783706 + AluY SINE Alu 1 298 -13 1608 154 3 50 chr17 52720847 52721011 -36783542 + AluJb SINE Alu 133 303 -9 2347 182 48 82 chr17 52721011 52721371 -36783182 + L1ME1 LINE L1 5190 5561 -605 1802 116 11 8 chr17 52721371 52721638 -36782915 + AluSq SINE Alu 42 309 -4 2347 182 48 82 chr17 52721638 52721712 -36782841 + L1ME1 LINE L1 5561 5636 -530 1377 156 10 73 chr17 52721712 52722036 -36782517 - AluJb SINE Alu 0 307 3 2347 182 48 82 chr17 52722036 52722281 -36782272 + L1ME1 LINE L1 5636 5943 -223 968 132 0 0 chr17 52722295 52722439 -36782114 + AluSq/x SINE Alu 2 145 -168 1897 87 64 0 chr17 52722439 52722732 -36781821 + AluSp SINE Alu 1 310 0 4263 83 7 42 chr17 52722733 52722770 -36781783 - MER41A-int LTR ERV1 -715 5231 5194 266 0 29 0 chr17 52722770 52722804 -36781749 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1699 158 29 0 chr17 52722804 52723076 -36781477 - AluSx SINE Alu -32 280 1 4263 83 7 42 chr17 52723076 52723363 -36781190 - MER41A-int LTR ERV1 -751 5195 4936 2075 121 0 0 chr17 52723363 52723683 -36780870 - AluSx SINE Alu 0 312 1 4263 83 7 42 chr17 52723683 52723971 -36780582 - MER41A-int LTR ERV1 -1010 4936 4639 574 118 35 0 chr17 52723966 52724051 -36780502 - MER41A-int LTR ERV1 -5858 88 1 * 996 116 7 7 chr17 52724051 52724206 -36780347 - MER41A LTR ERV1 0 554 400 910 177 16 16 chr17 52724216 52724402 -36780151 - AluJo SINE Alu -126 186 1 2348 85 0 0 chr17 52724406 52724712 -36779841 - AluY SINE Alu -5 306 1 804 186 62 0 chr17 52724714 52724859 -36779694 - AluJb SINE Alu -8 304 151 348 24 0 0 chr17 52724859 52724900 -36779653 + (CA)n Simple_repeat Simple_repeat 2 42 0 841 196 76 0 chr17 52724908 52725066 -36779487 + FRAM SINE Alu 1 165 -11 2066 115 3 0 chr17 52725146 52725442 -36779111 + AluSp SINE Alu 1 297 -16 257 329 91 30 chr17 52725446 52725481 -36779072 - MIR SINE MIR 0 262 231 1916 194 115 43 chr17 52725481 52725647 -36778906 + MLT1F LTR MaLR 1 154 -388 1768 147 0 7 chr17 52725647 52725963 -36778590 + AluJb SINE Alu 1 314 0 1916 194 115 43 chr17 52725963 52726301 -36778252 + MLT1F LTR MaLR 154 542 0 257 329 91 30 chr17 52726301 52726496 -36778057 - MIR SINE MIR -31 231 18 1635 94 147 4 chr17 52726550 52726846 -36777707 - AluSq SINE Alu 0 313 1 2077 126 3 0 chr17 52726856 52727165 -36777388 - AluSx SINE Alu -2 310 1 384 167 0 45 chr17 52727165 52727231 -36777322 + AluJ/FRAM SINE Alu 224 286 -16 1637 160 0 57 chr17 52727500 52727681 -36776872 - AluJb SINE Alu 0 312 157 2431 51 0 16 chr17 52727681 52727997 -36776556 - AluY SINE Alu 0 311 1 1637 160 0 57 chr17 52727997 52728146 -36776407 - AluJb SINE Alu -155 157 1 2331 88 0 0 chr17 52728188 52728493 -36776060 - AluSp SINE Alu -8 305 1 1371 179 45 4 chr17 52728557 52728661 -36775892 + AluJo SINE Alu 17 115 -197 387 0 0 0 chr17 52728661 52728704 -36775849 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1371 179 45 4 chr17 52728704 52728867 -36775686 + AluJo SINE Alu 115 295 -17 713 144 48 0 chr17 52728867 52729013 -36775540 - L1MB3 LINE L1 -13 6170 6018 579 173 65 0 chr17 52729014 52729153 -36775400 - L1MB3 LINE L1 -264 5916 5769 21 0 0 0 chr17 52729287 52729308 -36775245 + AT_rich Low_complexity Low_complexity 1 21 0 242 254 68 34 chr17 52729689 52729807 -36774746 + MER117 DNA MER1_type 34 155 -42 203 301 11 32 chr17 52730444 52730537 -36774016 + GA-rich Low_complexity Low_complexity 6 96 0 223 136 0 61 chr17 52730578 52730644 -36773909 + (AGGGGG)n Simple_repeat Simple_repeat 3 64 0 25 31 0 0 chr17 52731087 52731119 -36773434 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 52731358 52731381 -36773172 + AT_rich Low_complexity Low_complexity 1 23 0 301 216 52 52 chr17 52732157 52732254 -36772299 + L1 LINE L1 3088 3184 -2962 344 263 76 38 chr17 52732796 52732998 -36771555 - HAL1 LINE L1 -1402 1105 932 229 231 19 0 chr17 52733112 52733164 -36771389 + GA-rich Low_complexity Low_complexity 3 55 0 24 0 0 0 chr17 52733773 52733797 -36770756 + AT_rich Low_complexity Low_complexity 1 24 0 249 125 21 21 chr17 52734447 52734495 -36770058 - L2 LINE L2 -5 3308 3261 189 0 0 0 chr17 52736619 52736640 -36767913 + (T)n Simple_repeat Simple_repeat 1 21 0 396 40 0 0 chr17 52739139 52739189 -36765364 + (TG)n Simple_repeat Simple_repeat 2 51 0 25 0 0 0 chr17 52741530 52741555 -36762998 + AT_rich Low_complexity Low_complexity 1 25 0 209 33 33 0 chr17 52742993 52743023 -36761530 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 1881 149 7 0 chr17 52744993 52745288 -36759265 + AluSx SINE Alu 1 297 -15 2278 107 0 0 chr17 52747105 52747413 -36757140 + AluSq SINE Alu 1 308 -5 237 333 35 53 chr17 52748104 52748218 -36756335 - L2 LINE L2 0 3272 3161 1979 113 0 13 chr17 52748236 52748546 -36756007 - AluSx SINE Alu -6 306 1 26 0 0 0 chr17 52748616 52748642 -36755911 + AT_rich Low_complexity Low_complexity 1 26 0 2145 99 3 0 chr17 52748642 52748935 -36755618 + AluSq SINE Alu 1 294 -19 879 163 25 25 chr17 52748935 52749014 -36755539 - L1MB3 LINE L1 -4 6179 6101 2344 80 0 6 chr17 52749014 52749325 -36755228 + AluSx SINE Alu 3 311 -1 879 163 25 25 chr17 52749325 52749441 -36755112 - L1MB3 LINE L1 -81 6102 5984 2046 48 11 7 chr17 52749528 52749798 -36754755 - AluY SINE Alu -7 304 34 1795 57 9 4 chr17 52750154 52750383 -36754170 + AluSg/x SINE Alu 83 312 0 276 269 258 16 chr17 52750593 52750779 -36753774 - MIR SINE MIR -11 251 21 722 202 0 0 chr17 52750793 52750917 -36753636 + FRAM SINE Alu 36 159 -17 1996 107 23 13 chr17 52751120 52751420 -36753133 - AluSx SINE Alu -9 303 1 692 208 38 13 chr17 52751951 52752110 -36752443 - AluJb SINE Alu -14 298 136 262 284 34 11 chr17 52752214 52752302 -36752251 + MIR SINE MIR 103 192 -70 337 283 155 11 chr17 52753525 52753712 -36750841 - MIR SINE MIR -44 218 5 * 385 271 61 33 chr17 52753690 52753871 -36750682 + L2 LINE L2 3128 3313 0 2158 114 0 7 chr17 52753883 52754190 -36750363 + AluSx SINE Alu 1 305 -7 181 197 268 42 chr17 52754193 52754264 -36750289 + L2 LINE L2 3186 3272 0 396 0 0 0 chr17 52754287 52754331 -36750222 + (TG)n Simple_repeat Simple_repeat 2 45 0 1583 140 8 4 chr17 52754822 52755086 -36749467 - AluSq SINE Alu -6 307 43 846 118 0 0 chr17 52755579 52755740 -36748813 + (TTCC)n Simple_repeat Simple_repeat 4 164 0 2111 108 4 0 chr17 52755745 52756014 -36748539 - AluSc SINE Alu -39 270 1 2796 35 0 0 chr17 52756544 52756855 -36747698 + AluY SINE Alu 1 311 0 1652 160 48 24 chr17 52756862 52757155 -36747398 + AluJb SINE Alu 1 300 -12 425 298 157 13 chr17 52757706 52757780 -36746773 + L2 LINE L2 3005 3067 -246 2282 111 3 0 chr17 52757780 52758078 -36746475 - AluSg SINE Alu -11 299 1 425 298 157 13 chr17 52758078 52758238 -36746315 + L2 LINE L2 3067 3273 -40 696 189 0 8 chr17 52758307 52758439 -36746114 + FRAM SINE Alu 1 131 -45 1305 151 15 85 chr17 52758602 52758874 -36745679 - AluJo SINE Alu -13 299 47 2167 144 0 0 chr17 52759115 52759414 -36745139 - AluSx SINE Alu -13 299 1 2299 95 3 16 chr17 52759596 52759902 -36744651 - AluSx SINE Alu -10 302 1 1637 171 59 3 chr17 52760089 52760375 -36744178 - AluSx SINE Alu -10 302 1 1852 137 19 38 chr17 52760462 52760775 -36743778 - AluSx SINE Alu -5 307 1 1909 145 21 3 chr17 52761794 52762084 -36742469 - AluJb SINE Alu -17 295 1 1117 143 0 23 chr17 52762111 52762286 -36742267 - AluSc SINE Alu -5 304 134 2420 87 0 34 chr17 52762292 52762615 -36741938 - AluSx SINE Alu 0 312 1 583 181 26 0 chr17 52762797 52762913 -36741640 - AluJb SINE Alu -16 296 178 306 170 0 0 chr17 52763977 52764030 -36740523 + MIR SINE MIR 95 147 -61 248 130 22 0 chr17 52764136 52764182 -36740371 + (TG)n Simple_repeat Simple_repeat 1 47 0 261 169 0 0 chr17 52764527 52764586 -36739967 + (CCCG)n Simple_repeat Simple_repeat 3 61 0 234 91 0 0 chr17 52765019 52765052 -36739501 + (CAAAC)n Simple_repeat Simple_repeat 5 37 0 216 324 28 0 chr17 52765054 52765125 -36739428 + L2 LINE L2 3143 3215 -57 703 139 168 19 chr17 52765125 52765333 -36739220 - Charlie5 DNA MER1_type 0 2624 2386 2010 123 0 60 chr17 52765356 52765674 -36738879 - AluSx SINE Alu -13 299 1 1163 82 0 0 chr17 52765674 52765809 -36738744 - AluSq/x SINE Alu -178 135 1 417 192 19 58 chr17 52765815 52765919 -36738634 - Charlie5 DNA MER1_type -2507 105 6 198 277 15 15 chr17 52766519 52766584 -36737969 - MIR3 SINE MIR -32 176 112 357 260 115 30 chr17 52767209 52767444 -36737109 - L1MC5 LINE L1 -26 7935 7681 907 199 48 0 chr17 52767492 52767658 -36736895 - AluJb SINE Alu -14 298 125 372 22 0 0 chr17 52767658 52767703 -36736850 + (TA)n Simple_repeat Simple_repeat 1 45 0 243 61 0 0 chr17 52767702 52767735 -36736818 + (CA)n Simple_repeat Simple_repeat 2 34 0 * 317 250 0 0 chr17 52767736 52767796 -36736757 - L1MC4 LINE L1 -1339 6703 6644 1867 127 45 8 chr17 52767820 52768088 -36736465 - AluSg SINE Alu -32 278 1 445 286 77 11 chr17 52768134 52768316 -36736237 - MIR SINE MIR -61 201 8 291 167 0 0 chr17 52768542 52768596 -36735957 + L1MC5 LINE L1 7607 7660 -301 1644 145 16 58 chr17 52768596 52768906 -36735647 + AluJb SINE Alu 3 299 -13 181 278 21 52 chr17 52769392 52769489 -36735064 + MIR3 SINE MIR 94 187 -21 209 228 0 101 chr17 52769921 52770000 -36734553 + L2 LINE L2 3200 3270 -2 2087 110 3 45 chr17 52771667 52771977 -36732576 - AluSx SINE Alu -15 297 1 1538 179 52 46 chr17 52772016 52772323 -36732230 + AluJb SINE Alu 2 310 -2 1186 228 65 47 chr17 52772497 52772883 -36731670 + L1M4 LINE L1 4624 5016 -1130 254 314 46 37 chr17 52772887 52773024 -36731529 - MIR SINE MIR -68 140 36 756 61 31 0 chr17 52773910 52774008 -36730545 + U6 snRNA snRNA 1 101 -6 183 114 0 0 chr17 52774009 52774044 -36730509 + (A)n Simple_repeat Simple_repeat 1 35 0 238 262 33 0 chr17 52774160 52774221 -36730332 + MER112 DNA MER1_type 192 254 -6 2286 78 47 0 chr17 52774226 52774522 -36730031 + AluSp SINE Alu 1 310 -3 2565 84 0 0 chr17 52776425 52776735 -36727818 - AluSg SINE Alu 0 310 1 2143 133 10 7 chr17 52776977 52777286 -36727267 - AluSx SINE Alu -2 310 1 1657 170 0 4 chr17 52777807 52778072 -36726481 - AluJb SINE Alu -44 268 5 248 325 12 0 chr17 52778125 52778208 -36726345 + (TG)n Simple_repeat Simple_repeat 2 85 0 361 235 25 0 chr17 52778420 52778501 -36726052 + AluJ/FRAM SINE Alu 216 298 -4 472 298 15 0 chr17 52778518 52778649 -36725904 + L2 LINE L2 3181 3313 0 1636 127 0 80 chr17 52778682 52778958 -36725595 - AluSx SINE Alu 0 312 59 186 43 0 0 chr17 52778958 52778981 -36725572 + (TTTTC)n Simple_repeat Simple_repeat 4 26 0 1990 148 0 0 chr17 52778984 52779267 -36725286 - AluSx SINE Alu -29 283 1 2260 90 3 20 chr17 52779304 52779437 -36725116 + AluSx SINE Alu 4 138 -174 2276 103 3 13 chr17 52779437 52779739 -36724814 + AluSp SINE Alu 1 299 -14 2260 90 3 20 chr17 52779739 52779904 -36724649 + AluSx SINE Alu 138 297 -15 651 177 0 9 chr17 52779904 52780017 -36724536 - FLAM_C SINE Alu -29 114 3 23 0 0 0 chr17 52780353 52780376 -36724177 + AT_rich Low_complexity Low_complexity 1 23 0 2601 60 0 0 chr17 52780379 52780681 -36723872 - AluY SINE Alu -9 302 1 681 199 15 0 chr17 52780684 52780815 -36723738 - FAM SINE Alu -11 174 42 203 179 0 0 chr17 52782185 52782224 -36722329 + T-rich Low_complexity Low_complexity 1 39 0 314 328 155 6 chr17 52782226 52782400 -36722153 - MIR SINE MIR -59 203 4 1572 159 45 15 chr17 52783615 52783879 -36720674 - AluJb SINE Alu -30 282 11 2266 117 0 0 chr17 52783896 52784194 -36720359 - AluSc SINE Alu -11 298 1 2215 91 0 20 chr17 52784355 52784652 -36719901 + AluY SINE Alu 8 298 -13 2373 77 10 32 chr17 52784768 52784900 -36719653 + AluSp SINE Alu 1 134 -179 2271 107 0 16 chr17 52784900 52785210 -36719343 + AluSg SINE Alu 1 305 -5 2373 77 10 32 chr17 52785210 52785389 -36719164 + AluSp SINE Alu 134 305 -8 986 365 30 40 chr17 52785399 52785703 -36718850 + AluY SINE Alu 1 301 0 2379 76 6 44 chr17 52786235 52786379 -36718174 + AluSp SINE Alu 1 149 -164 2564 54 0 0 chr17 52786379 52786673 -36717880 + AluY SINE Alu 1 294 -17 2379 76 6 44 chr17 52786673 52786844 -36717709 + AluSp SINE Alu 149 304 -9 2458 80 0 3 chr17 52786844 52787145 -36717408 + AluY SINE Alu 1 300 -11 597 256 41 32 chr17 52787279 52787498 -36717055 - MIR SINE MIR -38 224 4 2296 102 0 0 chr17 52787499 52787793 -36716760 + AluSg1 SINE Alu 1 294 -15 2128 126 0 40 chr17 52787794 52788119 -36716434 + AluSx SINE Alu 1 312 0 1561 142 4 0 chr17 52788132 52788357 -36716196 + AluJb SINE Alu 87 312 0 1525 113 0 0 chr17 52788869 52789072 -36715481 - AluSg/x SINE Alu 0 310 108 1785 193 3 3 chr17 52789190 52789491 -36715062 - AluJb SINE Alu -11 301 1 2185 116 10 3 chr17 52790021 52790331 -36714222 + AluSx SINE Alu 1 312 0 2326 67 0 0 chr17 52790334 52790654 -36713899 + AluY SINE Alu 1 320 0 1317 105 0 28 chr17 52790654 52790835 -36713718 + AluSg/x SINE Alu 130 305 -5 2250 111 7 0 chr17 52792185 52792482 -36712071 - AluSx SINE Alu -13 299 1 925 116 0 23 chr17 52793122 52793365 -36711188 + AluSg SINE Alu 2 292 -18 205 152 0 0 chr17 52793585 52793618 -36710935 + C-rich Low_complexity Low_complexity 2 34 0 2219 124 3 10 chr17 52794005 52794319 -36710234 + AluSx SINE Alu 1 312 0 2247 113 7 3 chr17 52794599 52794908 -36709645 + AluSg SINE Alu 1 310 0 251 233 83 100 chr17 52795195 52795357 -36709196 + MIR3 SINE MIR 4 163 -65 1250 164 82 46 chr17 52795476 52795549 -36709004 - AluJo SINE Alu -19 293 224 2274 124 0 0 chr17 52795549 52795856 -36708697 + AluSq SINE Alu 1 307 -6 1250 164 82 46 chr17 52795856 52795935 -36708618 - AluJo SINE Alu -88 224 149 2265 108 7 0 chr17 52795935 52796242 -36708311 - AluSc SINE Alu 0 309 1 1250 164 82 46 chr17 52796242 52796369 -36708184 - AluJo SINE Alu -163 149 3 1256 163 5 9 chr17 52796417 52796632 -36707921 + AluSc SINE Alu 6 219 -90 2386 92 0 13 chr17 52796858 52797173 -36707380 - AluY SINE Alu 0 311 1 2044 89 96 0 chr17 52797174 52797445 -36707108 - AluSg SINE Alu -13 297 1 251 346 0 0 chr17 52797448 52797549 -36707004 + L2 LINE L2 2520 2620 -694 1731 103 126 43 chr17 52797577 52797803 -36706750 + MER51B LTR ERV1 1 207 -170 2500 75 3 0 chr17 52797803 52798108 -36706445 - AluSp SINE Alu -7 306 1 2143 126 3 10 chr17 52798116 52798426 -36706127 - AluSx SINE Alu -1 311 4 1731 103 126 43 chr17 52798426 52798538 -36706015 + MER51B LTR ERV1 213 377 0 1731 89 0 43 chr17 52798538 52798796 -36705757 + MER51B-int LTR ERV1 1 247 -7569 2272 107 7 3 chr17 52798796 52799104 -36705449 - AluSg1 SINE Alu 0 309 1 2325 88 7 7 chr17 52799193 52799500 -36705053 - AluSq SINE Alu -6 307 1 303 333 68 8 chr17 52799500 52799632 -36704921 - MIR SINE MIR -95 167 28 187 359 48 19 chr17 52799686 52799789 -36704764 + L2 LINE L2 3198 3303 -10 21 57 0 0 chr17 52800119 52800154 -36704399 + GC_rich Low_complexity Low_complexity 1 35 0 2529 59 3 0 chr17 52800572 52800876 -36703677 - AluY SINE Alu -6 305 1 308 250 8 81 chr17 52801134 52801258 -36703295 - MIR SINE MIR 0 262 148 2063 125 11 0 chr17 52801264 52801569 -36702984 - AluSg SINE Alu 0 308 1 1001 86 7 29 chr17 52801569 52801709 -36702844 - AluSq/x SINE Alu -175 137 1 2263 112 0 6 chr17 52801731 52802045 -36702508 + AluSx SINE Alu 1 312 0 442 100 29 0 chr17 52802050 52802120 -36702433 + AluS SINE Alu 2 73 -240 222 294 29 0 chr17 52802127 52802195 -36702358 - MIR SINE MIR -154 108 39 696 54 0 0 chr17 52802539 52802632 -36701921 - AluSp/q SINE Alu -10 303 211 185 62 0 31 chr17 52802887 52802906 -36701647 + (ATTG)n Simple_repeat Simple_repeat 2 21 -11 2093 148 3 3 chr17 52802906 52803209 -36701344 + AluSx SINE Alu 1 303 -9 185 62 0 31 chr17 52803209 52803221 -36701332 + (ATTG)n Simple_repeat Simple_repeat 21 32 0 419 170 234 0 chr17 52803221 52803315 -36701238 - FLAM_C SINE Alu -17 116 1 2387 77 0 0 chr17 52804102 52804388 -36700165 - AluY SINE Alu -25 286 1 23 0 0 0 chr17 52804533 52804556 -36699997 + AT_rich Low_complexity Low_complexity 1 23 0 1503 175 4 0 chr17 52804556 52804784 -36699769 + AluJb SINE Alu 1 229 -83 1728 155 7 0 chr17 52804803 52805074 -36699479 - AluSx SINE Alu -9 303 31 1634 85 0 24 chr17 52805174 52805386 -36699167 - AluSg SINE Alu -103 207 1 2072 104 3 24 chr17 52805475 52805773 -36698780 - AluSc SINE Alu -16 293 2 2416 93 3 0 chr17 52805837 52806147 -36698406 - AluSp SINE Alu -2 311 1 22 0 0 0 chr17 52806187 52806209 -36698344 + AT_rich Low_complexity Low_complexity 1 22 0 2265 106 0 10 chr17 52806382 52806716 -36697837 - AluSc SINE Alu 0 309 1 2044 138 0 7 chr17 52806719 52807016 -36697537 - AluSq SINE Alu -18 295 1 800 178 12 65 chr17 52808348 52808517 -36696036 - FAM SINE Alu -15 160 1 280 233 52 26 chr17 52808521 52808637 -36695916 - L1ME4a LINE L1 -44 6077 5959 1975 132 7 36 chr17 52808671 52808830 -36695723 - AluSx SINE Alu -18 294 147 2651 43 0 0 chr17 52808830 52809130 -36695423 - AluY SINE Alu -11 300 1 1975 132 7 36 chr17 52809130 52809273 -36695280 - AluSx SINE Alu -165 147 1 965 194 194 48 chr17 52809507 52809740 -36694813 + AluSx SINE Alu 1 279 -33 1954 112 79 4 chr17 52809740 52810017 -36694536 - AluSg SINE Alu -12 298 1 965 194 194 48 chr17 52810017 52810051 -36694502 + AluSx SINE Alu 279 307 -5 412 273 60 60 chr17 52810286 52810469 -36694084 + MER102b DNA MER1_type 138 320 -21 1710 157 28 14 chr17 52810616 52810903 -36693650 - AluJo SINE Alu -20 292 2 509 263 88 7 chr17 52811295 52811432 -36693121 - L2 LINE L2 -6 3266 3119 2195 97 10 23 chr17 52811597 52811897 -36692656 - AluSp SINE Alu -17 296 1 2314 91 0 10 chr17 52812128 52812426 -36692127 - AluSx SINE Alu -17 295 1 192 239 0 0 chr17 52813238 52813284 -36691269 + MIR SINE MIR 129 174 -88 192 294 24 59 chr17 52814112 52814197 -36690356 - MIR SINE MIR -100 108 27 2438 69 3 20 chr17 52817580 52817886 -36686667 + AluSp SINE Alu 1 301 -12 2082 154 10 6 chr17 52819049 52819360 -36685193 - AluSx SINE Alu 0 312 1 2250 139 0 0 chr17 52819487 52819797 -36684756 - AluSx SINE Alu -2 310 1 568 164 67 75 chr17 52820085 52820219 -36684334 + FLAM_C SINE Alu 1 133 0 404 119 41 5 chr17 52820224 52820467 -36684086 + AluSx SINE Alu 21 302 -8 888 188 19 7 chr17 52820473 52820627 -36683926 + FRAM SINE Alu 8 163 -13 2150 92 35 3 chr17 52820728 52821012 -36683541 - AluSq SINE Alu -20 293 1 2394 105 0 0 chr17 52821013 52821319 -36683234 - AluY SINE Alu -3 308 3 2086 130 7 0 chr17 52821582 52821874 -36682679 - AluSx SINE Alu -18 294 1 2188 104 0 0 chr17 52821945 52822232 -36682321 - AluSg SINE Alu -1 309 23 1968 141 3 0 chr17 52822323 52822606 -36681947 - AluJo SINE Alu -20 292 9 518 297 0 0 chr17 52823532 52823643 -36680910 + FLAM_A SINE Alu 1 111 -31 808 137 6 137 chr17 52823643 52823825 -36680728 - FRAM SINE Alu -9 167 10 2186 108 26 7 chr17 52823841 52824148 -36680405 - AluSq SINE Alu 0 313 1 1090 170 5 47 chr17 52824166 52824378 -36680175 - AluJo SINE Alu -25 287 85 1935 162 0 3 chr17 52824583 52824873 -36679680 + AluJo SINE Alu 1 289 -23 1215 114 0 0 chr17 52825077 52825235 -36679318 + AluSg SINE Alu 1 158 -152 239 0 32 0 chr17 52825235 52825266 -36679287 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2104 146 0 9 chr17 52825314 52825629 -36678924 + AluSx SINE Alu 1 312 0 2168 118 3 0 chr17 52825728 52826017 -36678536 + AluSx SINE Alu 1 290 -22 2173 128 0 3 chr17 52826123 52826421 -36678132 + AluSq SINE Alu 1 297 -16 405 305 60 6 chr17 52826572 52826739 -36677814 + MIR SINE MIR 81 256 -6 2282 104 3 0 chr17 52827037 52827336 -36677217 - AluY SINE Alu -11 300 1 1288 161 20 81 chr17 52827361 52827659 -36676894 - AluSq SINE Alu -32 281 2 275 0 29 0 chr17 52827744 52827779 -36676774 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 2336 97 10 0 chr17 52827810 52828110 -36676443 + AluSg SINE Alu 1 303 -7 2399 84 13 0 chr17 52829320 52829618 -36674935 - AluSx SINE Alu -10 302 1 600 203 17 17 chr17 52830326 52830444 -36674109 + FLAM_C SINE Alu 2 119 -24 312 48 0 0 chr17 52830445 52830487 -36674066 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 974 155 24 39 chr17 52830591 52830644 -36673909 + MER105 DNA DNA 1 53 -151 668 140 123 78 chr17 52830644 52830708 -36673845 - MER5A DNA MER1_type -1 188 128 2436 100 0 0 chr17 52830708 52831017 -36673536 + AluSc SINE Alu 1 309 0 668 140 123 78 chr17 52831017 52831131 -36673422 - MER5A DNA MER1_type -61 128 2 974 155 24 39 chr17 52831131 52831283 -36673270 + MER105 DNA DNA 53 203 -1 198 0 0 0 chr17 52832284 52832306 -36672247 + (A)n Simple_repeat Simple_repeat 1 22 0 574 240 8 0 chr17 52833156 52833281 -36671272 + MER94 DNA DNA 1 126 -8 410 320 10 0 chr17 52833309 52833412 -36671141 + MIR3 SINE MIR 64 167 -41 264 306 56 0 chr17 52834443 52834515 -36670038 - MIR SINE MIR -32 230 155 26 0 0 0 chr17 52834960 52834986 -36669567 + GC_rich Low_complexity Low_complexity 1 26 0 303 155 0 84 chr17 52835594 52835665 -36668888 - L2 LINE L2 -5 3308 3244 2535 60 13 0 chr17 52835841 52836140 -36668413 + AluSg SINE Alu 2 304 -6 2597 44 0 0 chr17 52836191 52836487 -36668066 + AluY SINE Alu 2 297 -14 391 250 164 0 chr17 52836562 52836690 -36667863 - MER46C DNA MER2_type -105 233 85 2215 110 3 0 chr17 52836714 52837004 -36667549 + AluSq SINE Alu 1 291 -22 1533 114 3 151 chr17 52837028 52837378 -36667175 - AluSx SINE Alu 0 302 5 1780 128 98 8 chr17 52837472 52837738 -36666815 - AluJb SINE Alu -22 290 1 513 283 97 65 chr17 52837754 52837846 -36666707 - MIR SINE MIR -5 257 169 2296 111 3 0 chr17 52837846 52838153 -36666400 - AluY SINE Alu -3 308 1 513 283 97 65 chr17 52838153 52838307 -36666246 - MIR SINE MIR -93 169 3 266 136 0 0 chr17 52838372 52838416 -36666137 - AluSp SINE Alu -6 294 251 1822 106 4 40 chr17 52838516 52838789 -36665764 - AluSp SINE Alu -47 266 4 311 274 213 6 chr17 52838805 52838969 -36665584 + MIR SINE MIR 65 262 0 183 313 75 15 chr17 52838969 52839036 -36665517 + L2 LINE L2 2993 3063 -209 25 0 0 0 chr17 52839036 52839061 -36665492 + AT_rich Low_complexity Low_complexity 1 25 0 2354 98 3 0 chr17 52839333 52839630 -36664923 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr17 52839681 52839701 -36664852 + (TA)n Simple_repeat Simple_repeat 2 21 0 237 222 0 19 chr17 52839701 52839755 -36664798 + G-rich Low_complexity Low_complexity 3 55 0 711 186 9 0 chr17 52839760 52839873 -36664680 - FLAM_C SINE Alu -18 115 2 2289 98 0 3 chr17 52840660 52840956 -36663597 - AluSg SINE Alu -10 300 6 30 0 0 0 chr17 52841376 52841406 -36663147 + AT_rich Low_complexity Low_complexity 1 30 0 2249 93 0 20 chr17 52841440 52841741 -36662812 - AluSc SINE Alu -14 295 1 1951 102 3 96 chr17 52841958 52842290 -36662263 - AluSx SINE Alu -11 301 1 2920 3 0 3 chr17 52842427 52842739 -36661814 - AluYa5 SINE Alu 0 311 1 867 184 58 76 chr17 52843088 52843311 -36661242 + MER20 DNA MER1_type 1 219 0 201 264 194 0 chr17 52843338 52843410 -36661143 + MIR SINE MIR 38 123 -139 470 211 224 85 chr17 52843417 52843640 -36660913 + MIR SINE MIR 8 261 -1 2495 70 3 0 chr17 52844278 52844576 -36659977 - AluSp SINE Alu -14 299 1 186 43 0 0 chr17 52844836 52844859 -36659694 + (A)n Simple_repeat Simple_repeat 1 23 0 430 302 135 16 chr17 52844894 52845086 -36659467 + MIR SINE MIR 46 260 -2 2169 129 24 12 chr17 52845100 52845440 -36659113 + MER2 DNA MER2_type 1 344 0 21 0 0 0 chr17 52846728 52846749 -36657804 + AT_rich Low_complexity Low_complexity 1 21 0 1674 154 33 7 chr17 52846752 52847024 -36657529 - AluJb SINE Alu -23 289 11 1038 175 0 27 chr17 52847625 52847808 -36656745 - MER5B DNA MER1_type 0 178 1 2479 79 0 0 chr17 52849355 52849660 -36654893 + AluSx SINE Alu 1 305 -7 415 228 129 144 chr17 52849678 52850218 -36654335 + L1ME4a LINE L1 5289 5822 -299 2553 31 3 0 chr17 52850218 52850506 -36654047 - AluY SINE Alu -22 289 1 415 228 129 144 chr17 52850506 52850522 -36654031 + L1ME4a LINE L1 5822 5837 -284 2269 120 0 0 chr17 52850522 52850830 -36653723 - AluSx SINE Alu -4 308 1 1351 159 175 16 chr17 52851076 52851333 -36653220 - AluJo SINE Alu -4 298 1 1978 105 3 25 chr17 52851342 52851662 -36652891 - AluSg SINE Alu 0 315 2 2187 100 3 28 chr17 52851666 52851986 -36652567 - AluSx SINE Alu 0 312 1 1431 156 12 44 chr17 52852050 52852330 -36652223 + AluJo SINE Alu 40 311 0 181 267 22 22 chr17 52852433 52852478 -36652075 - L2 LINE L2 -18 3254 3210 2688 38 0 6 chr17 52852521 52852834 -36651719 - AluY SINE Alu 0 311 1 1393 159 9 105 chr17 52852834 52853161 -36651392 - AluSq SINE Alu -5 298 2 393 22 0 0 chr17 52853167 52853213 -36651340 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 2414 53 3 33 chr17 52853220 52853519 -36651034 - AluY SINE Alu -21 290 1 982 150 52 7 chr17 52853641 52853794 -36650759 + AluJo SINE Alu 7 166 -146 1596 108 0 58 chr17 52853991 52854286 -36650267 + AluSg SINE Alu 14 291 -19 1779 174 20 13 chr17 52854305 52854604 -36649949 - AluJb SINE Alu -11 301 1 2473 88 0 0 chr17 52854639 52854947 -36649606 - AluSc SINE Alu -1 308 1 2429 89 0 19 chr17 52854962 52855276 -36649277 - AluSg SINE Alu -2 308 1 609 131 123 33 chr17 52856107 52856229 -36648324 - FLAM_C SINE Alu 0 133 1 1975 89 0 11 chr17 52856351 52856622 -36647931 - AluSx SINE Alu -11 301 34 2206 82 20 0 chr17 52856789 52857093 -36647460 - AluSp SINE Alu -2 311 2 658 241 181 19 chr17 52857101 52857367 -36647186 + L2 LINE L2 3005 3313 0 1366 168 106 7 chr17 52857396 52857670 -36646883 + AluJo SINE Alu 1 301 -11 2283 80 7 0 chr17 52857680 52857979 -36646574 - AluSx SINE Alu -11 301 1 742 242 62 0 chr17 52858207 52858401 -36646152 - LTR16A1 LTR ERVL 0 457 252 1004 176 0 0 chr17 52858487 52858652 -36645901 - FRAM SINE Alu 0 166 2 1066 220 16 32 chr17 52858653 52858903 -36645650 - L1MC/D LINE L1 -2254 5554 5309 975 264 42 25 chr17 52859065 52859349 -36645204 - MLT1J LTR MaLR -170 341 53 2350 78 0 7 chr17 52859350 52859656 -36644897 - AluSx SINE Alu -7 305 2 889 182 0 18 chr17 52859657 52859822 -36644731 - FRAM SINE Alu -14 162 1 256 297 0 0 chr17 52859832 52859896 -36644657 - MIR SINE MIR -155 107 44 1742 122 29 32 chr17 52860779 52860964 -36643589 - AluSx SINE Alu 0 312 127 2323 74 0 10 chr17 52860964 52861273 -36643280 - AluY SINE Alu -5 306 1 1742 122 29 32 chr17 52861273 52861399 -36643154 - AluSx SINE Alu -185 127 2 1733 149 0 20 chr17 52861399 52861701 -36642852 - AluJo SINE Alu -16 296 1 1233 143 0 0 chr17 52861705 52861880 -36642673 - FAM SINE Alu 0 175 1 485 310 80 88 chr17 52861912 52862377 -36642176 + L2 LINE L2 2811 3271 -1 426 186 0 0 chr17 52862527 52862613 -36641940 + (TGGA)n Simple_repeat Simple_repeat 4 89 0 365 84 0 5 chr17 52862904 52863107 -36641446 + AluSp SINE Alu 1 299 -4 921 155 0 7 chr17 52863534 52863682 -36640871 + AluJb SINE Alu 151 297 -15 635 231 222 42 chr17 52863802 52864014 -36640539 - MIR SINE MIR -10 252 3 1962 122 0 0 chr17 52864287 52864566 -36639987 - AluSx SINE Alu -13 299 21 289 270 0 16 chr17 52864940 52865003 -36639550 + MIR SINE MIR 8 69 -193 1068 74 0 0 chr17 52865005 52865140 -36639413 + AluJb SINE Alu 1 135 -177 1364 157 78 68 chr17 52865142 52865436 -36639117 + AluJb SINE Alu 1 297 -15 351 225 95 118 chr17 52865444 52865613 -36638940 + MIR SINE MIR 81 245 -17 2370 52 3 0 chr17 52865619 52865910 -36638643 - AluY SINE Alu -19 292 1 2347 67 6 13 chr17 52865912 52866224 -36638329 - AluSq SINE Alu -3 310 1 230 0 33 0 chr17 52867039 52867069 -36637484 + (CAA)n Simple_repeat Simple_repeat 2 32 0 258 101 53 0 chr17 52867302 52867348 -36637205 + L1MB1 LINE L1 6126 6168 0 207 152 0 0 chr17 52867376 52867422 -36637131 + A-rich Low_complexity Low_complexity 1 46 0 315 252 54 36 chr17 52868295 52868406 -36636147 + MIR SINE MIR 57 169 -93 2118 121 3 0 chr17 52868498 52868805 -36635748 - AluSx SINE Alu -4 308 1 1838 141 7 3 chr17 52868947 52869251 -36635302 - AluSx SINE Alu -7 305 1 1538 156 27 34 chr17 52870022 52870317 -36634236 + AluJo SINE Alu 1 293 -19 822 174 27 7 chr17 52870355 52870504 -36634049 + AluJb SINE Alu 138 289 -23 385 302 221 31 chr17 52870647 52871068 -36633485 + L2 LINE L2 1911 2411 -903 276 221 91 0 chr17 52871158 52871235 -36633318 - AluJo SINE Alu -146 156 73 375 178 132 90 chr17 52871242 52871457 -36633096 + MLT1D LTR MaLR 59 271 -196 255 77 26 0 chr17 52871582 52871621 -36632932 - L1MD1 LINE L1 -21 6221 6182 251 91 0 0 chr17 52872044 52872077 -36632476 + tRNA-Ile-ATT tRNA tRNA 2 34 -43 214 316 0 127 chr17 52872149 52872307 -36632246 + L2 LINE L2 3134 3271 -1 2118 148 39 43 chr17 52872708 52872760 -36631793 - L1MB8 LINE L1 -16 6162 6111 1992 98 18 3 chr17 52872760 52873046 -36631507 + AluSx SINE Alu 1 290 -22 2118 148 39 43 chr17 52873046 52873432 -36631121 - L1MB8 LINE L1 -67 6111 5726 1299 166 131 8 chr17 52873588 52873744 -36630809 - AluJo SINE Alu -11 291 156 270 0 0 0 chr17 52873744 52873774 -36630779 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1299 166 131 8 chr17 52873774 52873876 -36630677 - AluJo SINE Alu -146 156 1 1604 127 97 11 chr17 52873883 52874014 -36630539 - AluSx SINE Alu -21 291 173 2008 97 7 27 chr17 52874014 52874313 -36630240 - AluSg SINE Alu -17 293 1 1604 127 97 11 chr17 52874313 52874449 -36630104 - AluSx SINE Alu -139 173 1 2256 94 0 0 chr17 52874457 52874756 -36629797 - AluSg SINE Alu -11 299 1 2417 57 3 0 chr17 52874761 52875061 -36629492 - AluY SINE Alu -1 310 10 2214 72 14 3 chr17 52875454 52875747 -36628806 - AluSg SINE Alu -14 296 1 2156 70 28 0 chr17 52876055 52876339 -36628214 + AluY SINE Alu 1 292 -19 1979 137 13 0 chr17 52877223 52877529 -36627024 + AluSx SINE Alu 1 310 -2 455 239 53 9 chr17 52878779 52878892 -36625661 + L2 LINE L2 3195 3312 -1 2149 107 0 3 chr17 52879525 52879823 -36624730 - AluSx SINE Alu -15 297 1 216 0 0 0 chr17 52879882 52879906 -36624647 + (CA)n Simple_repeat Simple_repeat 1 24 0 336 102 0 0 chr17 52879911 52879960 -36624593 + (TA)n Simple_repeat Simple_repeat 2 50 0 1198 179 27 0 chr17 52880076 52880299 -36624254 + AluJb SINE Alu 1 229 -83 274 139 0 0 chr17 52880303 52880346 -36624207 + AluSp/q SINE Alu 191 233 -70 1153 97 0 0 chr17 52880346 52880501 -36624052 - AluSq SINE Alu -158 155 1 2004 113 3 0 chr17 52881472 52881774 -36622779 - AluSx SINE Alu 0 303 1 1500 155 11 11 chr17 52881973 52882237 -36622316 - AluJo SINE Alu -17 295 32 2280 69 30 7 chr17 52882510 52882813 -36621740 - AluSg SINE Alu 0 310 1 1865 148 17 0 chr17 52882956 52883277 -36621276 + AluSx SINE Alu 1 326 0 667 202 13 7 chr17 52883360 52883511 -36621042 + L1MB2 LINE L1 5978 6135 -36 1100 0 23 0 chr17 52883511 52883641 -36620912 + (CTATT)n Simple_repeat Simple_repeat 3 135 0 2046 89 3 18 chr17 52883641 52883923 -36620630 - AluY SINE Alu -32 279 2 968 113 0 0 chr17 52883927 52884060 -36620493 - FLAM_C SINE Alu 0 133 1 368 210 74 0 chr17 52884144 52884225 -36620328 - L1M4 LINE L1 -952 5194 5108 183 156 0 0 chr17 52884225 52884257 -36620296 + CT-rich Low_complexity Low_complexity 3 34 0 2143 119 0 6 chr17 52884269 52884580 -36619973 - AluSx SINE Alu -2 310 2 926 261 19 34 chr17 52884581 52884651 -36619902 - L1M4 LINE L1 -1028 5118 5048 2092 100 3 17 chr17 52884651 52884813 -36619740 - AluSx SINE Alu -17 295 137 2309 99 0 0 chr17 52884813 52885125 -36619428 - AluSx SINE Alu 0 312 1 2092 100 3 17 chr17 52885125 52885261 -36619292 - AluSx SINE Alu -175 137 1 926 261 19 34 chr17 52885261 52885515 -36619038 - L1M4 LINE L1 -1098 5048 4799 1073 64 14 0 chr17 52885616 52885757 -36618796 + AluSp/q SINE Alu 156 298 -15 2029 115 0 34 chr17 52885854 52886177 -36618376 + AluJo SINE Alu 1 312 0 342 80 0 0 chr17 52886266 52886316 -36618237 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 182 293 0 80 chr17 52886503 52886578 -36617975 + L3 LINE CR1 304 372 -1205 21 0 0 0 chr17 52887071 52887092 -36617461 + AT_rich Low_complexity Low_complexity 1 21 0 2106 99 7 0 chr17 52888250 52888542 -36616011 + AluSx SINE Alu 1 294 -18 610 148 50 0 chr17 52888645 52888746 -36615807 + MER41B LTR ERV1 530 635 0 792 221 7 0 chr17 52888746 52888891 -36615662 - AluJb SINE Alu -33 279 134 2149 82 14 0 chr17 52888891 52889183 -36615370 - AluSx SINE Alu -16 296 1 834 258 49 56 chr17 52889224 52889491 -36615062 - MER102b DNA MER1_type 0 341 77 2141 97 7 26 chr17 52891059 52891367 -36613186 - AluSx SINE Alu -10 302 1 310 183 155 0 chr17 52892196 52892267 -36612286 - L2 LINE L2 -11 3302 3221 944 173 0 0 chr17 52892280 52892442 -36612111 - AluSg/x SINE Alu -13 299 138 460 250 40 0 chr17 52892507 52892607 -36611946 - L2 LINE L2 0 3313 3210 383 105 141 168 chr17 52892617 52892736 -36611817 - Charlie5 DNA MER1_type 0 2624 2510 2091 114 0 35 chr17 52892736 52892907 -36611646 - AluSx SINE Alu -8 304 147 2186 100 0 0 chr17 52892907 52893196 -36611357 - AluSg SINE Alu -21 289 1 2091 114 0 35 chr17 52893196 52893339 -36611214 - AluSx SINE Alu -165 147 1 383 105 141 168 chr17 52893339 52893410 -36611143 - Charlie5 DNA MER1_type -114 2510 2439 1956 125 7 0 chr17 52893420 52893707 -36610846 + AluSx SINE Alu 10 298 -14 420 286 17 17 chr17 52894238 52894357 -36610196 + L2 LINE L2 3136 3254 -18 2047 126 3 0 chr17 52895260 52895561 -36608992 + AluSx SINE Alu 1 302 -10 25 0 0 0 chr17 52895612 52895637 -36608916 + AT_rich Low_complexity Low_complexity 1 25 0 961 157 6 22 chr17 52896916 52897094 -36607459 + AluSg/x SINE Alu 136 310 0 233 331 64 24 chr17 52897273 52897452 -36607101 + MIR SINE MIR 5 185 -77 2268 93 6 0 chr17 52897456 52897767 -36606786 - AluSp SINE Alu 0 313 1 315 0 0 0 chr17 52897792 52897827 -36606726 + (CA)n Simple_repeat Simple_repeat 2 36 0 252 0 0 0 chr17 52897848 52897876 -36606677 + (CA)n Simple_repeat Simple_repeat 2 29 0 2097 101 14 0 chr17 52898051 52898337 -36606216 - AluSx SINE Alu -20 292 3 1558 98 5 0 chr17 52898379 52898594 -36605959 + AluSq SINE Alu 1 216 -97 1085 97 0 0 chr17 52898594 52898738 -36605815 + AluSq SINE Alu 153 296 -17 835 165 72 67 chr17 52898928 52899014 -36605539 - MER3 DNA MER1_type 0 209 125 2288 62 7 0 chr17 52899014 52899303 -36605250 + AluSp SINE Alu 1 291 -22 180 0 0 0 chr17 52899303 52899323 -36605230 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 835 165 72 67 chr17 52899323 52899429 -36605124 - MER3 DNA MER1_type -83 126 15 188 338 62 12 chr17 52900002 52900082 -36604471 + L3b LINE CR1 1383 1466 -117 1812 111 23 0 chr17 52900295 52900557 -36603996 + AluSg SINE Alu 38 305 -5 629 177 115 23 chr17 52900585 52900715 -36603838 + AluJb SINE Alu 152 293 -19 2109 121 3 6 chr17 52900751 52901064 -36603489 + AluSx SINE Alu 1 312 0 182 319 58 29 chr17 52901844 52901913 -36602640 + MIR SINE MIR 58 128 -80 793 266 20 40 chr17 52902014 52902262 -36602291 + MIR SINE MIR 13 255 -7 180 240 100 0 chr17 52902276 52902326 -36602227 + MIR SINE MIR 204 258 -4 262 368 25 25 chr17 52902470 52902674 -36601879 - L2 LINE L2 -183 3089 2886 1850 137 0 3 chr17 52902768 52903083 -36601470 + AluJb SINE Alu 1 314 0 720 159 24 16 chr17 52903098 52903224 -36601329 + FLAM_A SINE Alu 10 136 -6 2144 112 7 0 chr17 52903224 52903528 -36601025 + AluSp SINE Alu 1 306 -7 2123 110 13 0 chr17 52903550 52903851 -36600702 + AluSx SINE Alu 1 305 -7 2241 78 0 26 chr17 52903892 52904201 -36600352 + AluY SINE Alu 1 301 -10 1959 100 0 0 chr17 52904479 52904748 -36599805 - AluY SINE Alu -24 287 19 1948 192 68 32 chr17 52904767 52905210 -36599343 + LTR2B LTR ERV1 32 490 0 23 0 0 0 chr17 52905239 52905262 -36599291 + AT_rich Low_complexity Low_complexity 1 23 0 2328 105 0 3 chr17 52905530 52905836 -36598717 - AluSx SINE Alu -7 305 1 2200 114 17 3 chr17 52906141 52906440 -36598113 + AluSq SINE Alu 2 304 -9 242 307 0 45 chr17 52906603 52906691 -36597862 + L2 LINE L2 3229 3312 -1 2248 87 0 11 chr17 52907148 52907468 -36597085 + AluSq SINE Alu 1 317 0 1926 148 7 20 chr17 52908127 52908424 -36596129 - AluJo SINE Alu -19 293 1 1777 142 78 0 chr17 52909058 52909339 -36595214 - AluJb SINE Alu -9 303 1 2240 111 27 0 chr17 52909611 52909909 -36594644 - AluSg SINE Alu -4 306 1 483 276 92 23 chr17 52910495 52910669 -36593884 + MIR3 SINE MIR 17 202 -6 2241 109 0 3 chr17 52910770 52911073 -36593480 - AluSx SINE Alu -10 302 1 246 273 172 0 chr17 52911592 52911691 -36592862 - MIR3 SINE MIR -15 193 78 1818 125 31 60 chr17 52912376 52912695 -36591858 - AluJb SINE Alu 0 312 3 1640 99 0 9 chr17 52912811 52913034 -36591519 - AluSg/x SINE Alu -18 292 72 2143 139 3 0 chr17 52913065 52913375 -36591178 + AluJb SINE Alu 1 311 -1 907 145 297 0 chr17 52913379 52913659 -36590894 + MER31B LTR ERV1 80 485 0 2422 97 0 0 chr17 52913786 52914086 -36590467 - AluSg SINE Alu -9 301 2 313 111 111 0 chr17 52914321 52914384 -36590169 + MER110A LTR ERV1 1 70 -398 1917 84 8 0 chr17 52914404 52914642 -36589911 + AluSq SINE Alu 1 240 -73 264 132 0 0 chr17 52914642 52914680 -36589873 + AluSg/x SINE Alu 214 251 -49 1005 134 7 0 chr17 52914680 52914829 -36589724 + AluJo/FRAM SINE Alu 156 305 -7 2321 164 46 59 chr17 52914837 52915381 -36589172 + LTR8A LTR ERV1 191 727 0 791 188 79 34 chr17 52915382 52915635 -36588918 + MER110A LTR ERV1 229 471 0 180 77 0 0 chr17 52915682 52915708 -36588845 + (TC)n Simple_repeat Simple_repeat 1 26 0 2197 93 10 14 chr17 52915708 52915998 -36588555 - AluSx SINE Alu -20 292 4 983 105 0 23 chr17 52916020 52916153 -36588400 - FLAM_C SINE Alu -1 132 3 1849 119 0 0 chr17 52916162 52916433 -36588120 - AluSx SINE Alu 0 317 47 2505 49 0 0 chr17 52916433 52916717 -36587836 + AluY SINE Alu 1 285 -26 243 0 0 0 chr17 52916721 52916748 -36587805 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 423 133 0 0 chr17 52916752 52916812 -36587741 - AluSx SINE Alu -249 61 2 234 0 0 0 chr17 52916958 52916984 -36587569 + (A)n Simple_repeat Simple_repeat 1 26 0 523 292 77 0 chr17 52917025 52917193 -36587360 - MIR SINE MIR -65 197 17 4283 112 24 13 chr17 52917217 52917659 -36586894 + MER41B LTR ERV1 1 437 -198 2375 100 3 0 chr17 52917659 52917969 -36586584 + AluY SINE Alu 1 311 0 2282 85 6 32 chr17 52917973 52918289 -36586264 + AluSq SINE Alu 1 308 -5 4283 112 24 13 chr17 52918289 52918469 -36586084 + MER41B LTR ERV1 439 635 0 1537 163 7 58 chr17 52918469 52918614 -36585939 - AluJb SINE Alu -33 279 155 2342 87 10 0 chr17 52918614 52918902 -36585651 - AluSg SINE Alu -16 294 4 1537 163 7 58 chr17 52918902 52919050 -36585503 - AluJb SINE Alu -157 155 1 2033 132 0 26 chr17 52919150 52919460 -36585093 - AluSx SINE Alu -10 302 1 1701 142 41 132 chr17 52919556 52919842 -36584711 - MER31B LTR ERV1 0 466 156 2198 108 7 3 chr17 52919842 52920139 -36584414 + AluSg SINE Alu 1 298 -12 1701 142 41 132 chr17 52920139 52920235 -36584318 - MER31B LTR ERV1 -310 156 139 791 173 0 8 chr17 52920235 52920368 -36584185 + FLAM_C SINE Alu 2 133 0 1701 142 41 132 chr17 52920368 52920491 -36584062 - MER31B LTR ERV1 -327 139 6 2108 116 3 28 chr17 52920493 52920811 -36583742 + AluSx SINE Alu 1 310 -2 767 206 0 0 chr17 52920846 52920977 -36583576 + FLAM_A SINE Alu 1 131 -2 419 216 0 0 chr17 52921040 52921114 -36583439 + Tigger2 DNA MER2_type 2645 2718 0 337 156 0 39 chr17 52921114 52921191 -36583362 + LTR37A LTR ERV1 349 422 -4 328 275 81 47 chr17 52921245 52921394 -36583159 - L1ME4a LINE L1 -234 5887 5734 2008 134 14 3 chr17 52921406 52921697 -36582856 - AluSq SINE Alu -19 294 1 1852 156 7 0 chr17 52921700 52921988 -36582565 - AluJb SINE Alu -18 294 5 2226 101 0 7 chr17 52921994 52922290 -36582263 - AluSx SINE Alu -18 294 1 804 105 0 9 chr17 52922480 52922594 -36581959 + AluSq/x SINE Alu 21 133 -179 2361 101 0 29 chr17 52922600 52922916 -36581637 + AluSx SINE Alu 3 309 -3 331 273 16 74 chr17 52923118 52923239 -36581314 + MIR3 SINE MIR 90 203 -5 1042 177 100 32 chr17 52923401 52923621 -36580932 + AluJo SINE Alu 66 300 -12 2409 72 3 0 chr17 52923628 52923919 -36580634 + AluSg SINE Alu 1 292 -18 2048 122 10 0 chr17 52925051 52925345 -36579208 - AluSx SINE Alu -15 297 1 326 268 18 36 chr17 52925523 52925686 -36578867 - MIR3 SINE MIR -20 188 30 794 131 0 97 chr17 52926887 52927032 -36577521 - FLAM_C SINE Alu 0 133 3 911 261 0 10 chr17 52927055 52927262 -36577291 - MIR SINE MIR -21 241 37 2127 117 27 0 chr17 52928118 52928418 -36576135 + AluSp SINE Alu 2 309 -4 2324 101 0 3 chr17 52928853 52929160 -36575393 - AluSx SINE Alu -6 306 1 1773 162 54 0 chr17 52929608 52929784 -36574769 - AluJb SINE Alu 0 312 112 189 0 0 0 chr17 52929784 52929805 -36574748 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1773 162 54 0 chr17 52929805 52929924 -36574629 - AluJb SINE Alu -200 112 1 400 217 238 26 chr17 52930034 52930245 -36574308 + MIR SINE MIR 3 246 -16 258 212 227 0 chr17 52930482 52930548 -36574005 - L2 LINE L2 -42 3230 3150 848 234 107 62 chr17 52930563 52930807 -36573746 - MIR SINE MIR 0 262 8 2316 105 0 10 chr17 52931197 52931501 -36573052 + AluSx SINE Alu 1 301 -11 225 273 15 0 chr17 52931586 52931652 -36572901 - Charlie8 DNA MER1_type -10 2407 2341 713 214 0 0 chr17 52931667 52931793 -36572760 + FLAM_A SINE Alu 1 126 -7 2211 122 3 25 chr17 52931820 52932139 -36572414 + AluSx SINE Alu 1 312 0 399 244 33 11 chr17 52932345 52932435 -36572118 - L1MC4 LINE L1 -1339 6703 6612 333 244 70 12 chr17 52932433 52932519 -36572034 - L1MC4 LINE L1 -1340 6702 6612 * 898 204 19 0 chr17 52932533 52932695 -36571858 - AluJb SINE Alu -8 304 140 2422 73 40 3 chr17 52933078 52933380 -36571173 - AluSp SINE Alu 0 313 1 2012 144 24 0 chr17 52933380 52933671 -36570882 - AluJo SINE Alu -14 298 1 2332 102 0 7 chr17 52934377 52934681 -36569872 + AluSx SINE Alu 1 302 -10 231 36 0 0 chr17 52934849 52934877 -36569676 + (CA)n Simple_repeat Simple_repeat 1 28 0 353 217 35 35 chr17 52934990 52935105 -36569448 + L1ME LINE L1 5708 5822 -299 2617 52 0 0 chr17 52935110 52935420 -36569133 + AluY SINE Alu 1 310 -1 2056 161 0 0 chr17 52935436 52935734 -36568819 + AluSx SINE Alu 1 298 -14 2299 91 3 22 chr17 52935857 52936175 -36568378 + AluSp SINE Alu 1 312 -1 2071 144 3 7 chr17 52936175 52936190 -36568363 - AluSp SINE Alu -8 305 291 180 0 0 0 chr17 52936190 52936210 -36568343 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2071 144 3 7 chr17 52936210 52936500 -36568053 - AluSp SINE Alu -22 291 1 2196 116 3 17 chr17 52936959 52937124 -36567429 - AluSx SINE Alu -13 299 138 2256 108 3 0 chr17 52937124 52937420 -36567133 - AluSp SINE Alu -16 297 1 2196 116 3 17 chr17 52937420 52937556 -36566997 - AluSx SINE Alu -174 138 2 2110 115 41 3 chr17 52939739 52940034 -36564519 - AluSx SINE Alu -6 306 1 2136 126 3 3 chr17 52940058 52940359 -36564194 - AluSp SINE Alu -12 301 1 2342 107 0 0 chr17 52940360 52940658 -36563895 - AluSx SINE Alu -14 298 1 691 31 20 20 chr17 52941093 52941191 -36563362 + (TTTC)n Simple_repeat Simple_repeat 3 100 0 1488 124 18 5 chr17 52941191 52941409 -36563144 - AluJb SINE Alu -32 280 60 220 313 9 52 chr17 52942955 52943070 -36561483 - MIR SINE MIR -69 139 30 530 296 48 34 chr17 52943115 52943321 -36561232 - MIR SINE MIR -51 211 3 1970 130 29 33 chr17 52944109 52944416 -36560137 + AluJb SINE Alu 1 306 -6 1569 170 6 79 chr17 52944469 52944650 -36559903 - AluJo SINE Alu -7 305 157 2168 139 0 0 chr17 52944650 52944944 -36559609 - AluSx SINE Alu -16 296 3 1569 170 6 79 chr17 52944944 52945091 -36559462 - AluJo SINE Alu -155 157 1 1875 182 0 13 chr17 52945101 52945409 -36559144 - AluJo SINE Alu -8 304 1 2200 118 3 3 chr17 52945420 52945724 -36558829 - AluSq SINE Alu -9 304 1 307 263 188 6 chr17 52945728 52945890 -36558663 - MIR SINE MIR -51 211 18 609 237 179 11 chr17 52946266 52946456 -36558097 - MIR SINE MIR -12 250 29 2334 107 3 0 chr17 52946592 52946890 -36557663 - AluSg SINE Alu -10 300 2 188 208 19 75 chr17 52947489 52947542 -36557011 - L2 LINE L2 -10 3262 3213 2426 97 0 0 chr17 52947877 52948185 -36556368 - AluSc SINE Alu -1 308 1 445 255 71 7 chr17 52948252 52948393 -36556160 - MIR SINE MIR -93 169 20 437 264 55 77 chr17 52948678 52948860 -36555693 + MIR SINE MIR 17 194 -68 875 241 45 15 chr17 52949383 52949582 -36554971 - MIR SINE MIR -56 206 2 1271 118 0 21 chr17 52949616 52949802 -36554751 - AluSq SINE Alu -12 301 120 416 222 0 0 chr17 52951000 52951081 -36553472 + MER81 DNA DNA 4 84 -30 369 203 0 25 chr17 52951203 52951282 -36553271 + MER5B DNA MER1_type 102 178 0 2373 102 0 7 chr17 52953374 52953678 -36550875 + AluSx SINE Alu 1 302 -10 603 260 116 6 chr17 52953682 52953855 -36550698 + MIR SINE MIR 44 235 -27 322 281 29 47 chr17 52954465 52954605 -36549948 - MIR SINE MIR -62 146 9 200 344 48 24 chr17 52954955 52955080 -36549473 + L3b LINE CR1 1325 1452 -131 222 213 21 0 chr17 52955085 52955132 -36549421 - L2 LINE L2 0 3313 3266 1832 167 0 16 chr17 52955536 52955842 -36548711 + AluJb SINE Alu 3 303 -9 2294 76 14 7 chr17 52956101 52956392 -36548161 + AluSg1 SINE Alu 1 293 -16 309 304 7 37 chr17 52958290 52958425 -36546128 + MIR3 SINE MIR 1 131 -77 1299 211 45 81 chr17 52958532 52958805 -36545748 - MLT1C LTR MaLR -9 458 208 1812 137 69 0 chr17 52958805 52959082 -36545471 - AluJb SINE Alu -16 296 1 1299 211 45 81 chr17 52959082 52959278 -36545275 - MLT1C LTR MaLR -259 208 6 33 0 0 23 chr17 52959472 52959493 -36545060 + AT_rich Low_complexity Low_complexity 1 21 -22 2179 132 3 0 chr17 52959493 52959788 -36544765 + AluSx SINE Alu 1 296 -16 33 0 0 23 chr17 52959788 52959810 -36544743 + AT_rich Low_complexity Low_complexity 21 43 0 428 244 29 113 chr17 52960004 52960210 -36544343 + MER112 DNA MER1_type 1 180 -80 2322 117 3 0 chr17 52960210 52960517 -36544036 + AluSx SINE Alu 1 308 -4 428 244 29 113 chr17 52960517 52960585 -36543968 + MER112 DNA MER1_type 180 252 -8 694 197 7 13 chr17 52960615 52960767 -36543786 + L1MB2 LINE L1 5087 5237 -909 1088 76 0 0 chr17 52960768 52960900 -36543653 + AluSq/x SINE Alu 1 132 -181 1736 114 0 0 chr17 52960901 52961128 -36543425 + AluSg/x SINE Alu 85 311 -1 4332 166 34 26 chr17 52961134 52961166 -36543387 + L1MB2 LINE L1 5224 5254 -917 2229 159 22 3 chr17 52961166 52961524 -36543029 - MLT1A1 LTR MaLR 0 365 1 4332 166 34 26 chr17 52961524 52961876 -36542677 + L1MB2 LINE L1 5254 5602 -569 2129 137 3 3 chr17 52961876 52962183 -36542370 + AluSx SINE Alu 1 307 -5 4332 166 34 26 chr17 52962183 52962742 -36541811 + L1MB2 LINE L1 5602 6169 -2 435 191 0 0 chr17 52962879 52962947 -36541606 + AluS SINE Alu 3 70 -242 913 112 0 22 chr17 52962947 52963081 -36541472 + AluSp/q SINE Alu 174 304 -9 2125 199 26 87 chr17 52963186 52963844 -36540709 - L1ME2 LINE L1 -66 6909 6292 1020 105 0 0 chr17 52963844 52963977 -36540576 - AluSg/x SINE Alu -4 306 174 397 193 173 64 chr17 52963978 52964108 -36540445 - L1ME2 LINE L1 -679 6294 6133 1829 153 0 36 chr17 52964108 52964278 -36540275 - AluJo SINE Alu -15 297 141 2398 99 0 0 chr17 52964278 52964572 -36539981 - AluSg SINE Alu -15 295 2 1829 153 0 36 chr17 52964572 52964709 -36539844 - AluJo SINE Alu -171 141 1 397 193 173 64 chr17 52964709 52964780 -36539773 - L1ME2 LINE L1 -840 6133 6071 371 210 74 0 chr17 52964793 52964874 -36539679 - L1ME2 LINE L1 -952 6005 5919 183 156 0 0 chr17 52964874 52964906 -36539647 + CT-rich Low_complexity Low_complexity 3 34 0 2245 119 3 10 chr17 52964918 52965229 -36539324 - AluSx SINE Alu -2 310 2 5747 223 29 55 chr17 52965237 52965300 -36539253 - L1ME2 LINE L1 -1034 5923 5860 2191 98 10 17 chr17 52965300 52965460 -36539093 - AluSx SINE Alu -17 295 136 2466 99 0 0 chr17 52965460 52965772 -36538781 - AluSx SINE Alu 0 312 1 2191 98 10 17 chr17 52965772 52965908 -36538645 - AluSx SINE Alu -176 136 1 5747 223 29 55 chr17 52965908 52966171 -36538382 - L1ME2 LINE L1 -1097 5860 5592 414 0 0 0 chr17 52966171 52966217 -36538336 + (TG)n Simple_repeat Simple_repeat 2 47 0 5747 223 29 55 chr17 52966217 52966758 -36537795 - L1ME2 LINE L1 -1365 5592 5038 2244 80 28 14 chr17 52966758 52967044 -36537509 - AluSc SINE Alu -19 290 1 5747 223 29 55 chr17 52967044 52967388 -36537165 - L1ME2 LINE L1 -1919 5038 4687 2195 113 3 0 chr17 52967388 52967714 -36536839 + AluSp SINE Alu 1 327 0 5747 223 29 55 chr17 52967714 52968081 -36536472 - L1ME2 LINE L1 -2270 4687 4399 1966 143 37 3 chr17 52968081 52968381 -36536172 - AluSx SINE Alu 0 312 3 5747 223 29 55 chr17 52968381 52968762 -36535791 - L1ME2 LINE L1 -2558 4399 4010 371 91 4 12 chr17 52968770 52969002 -36535551 + AluSx SINE Alu 1 300 0 353 204 68 43 chr17 52969012 52969121 -36535432 - L1ME2 LINE L1 -2947 4010 3894 2557 80 3 0 chr17 52969121 52969432 -36535121 - AluSp SINE Alu -1 312 1 353 204 68 43 chr17 52969432 52969484 -36535069 - L1ME2 LINE L1 -3063 3894 3845 1884 157 3 3 chr17 52969493 52969780 -36534773 - AluJb SINE Alu -12 300 14 297 125 0 0 chr17 52969805 52969853 -36534700 - U5 snRNA snRNA -68 48 1 816 247 82 18 chr17 52969853 52970193 -36534360 - L1ME2 LINE L1 -4970 1989 1628 1228 168 79 0 chr17 52970209 52970412 -36534141 - AluJb SINE Alu -10 302 84 379 180 40 40 chr17 52970412 52970476 -36534077 - L1ME2 LINE L1 -5222 1725 1662 2586 65 0 3 chr17 52970476 52970782 -36533771 - AluSc SINE Alu -4 305 1 379 180 40 40 chr17 52970782 52970881 -36533672 - L1ME2 LINE L1 -5284 1663 1453 745 193 0 14 chr17 52970884 52971029 -36533524 - FLAM_C SINE Alu 0 143 1 274 169 6 188 chr17 52971049 52971087 -36533466 - L1ME2 LINE L1 -5382 1565 1522 213 39 0 0 chr17 52971087 52971113 -36533440 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 274 169 6 188 chr17 52971113 52971130 -36533423 - L1ME2 LINE L1 -5425 1522 1504 1949 141 3 11 chr17 52971130 52971439 -36533114 - AluSq SINE Alu 0 307 1 274 169 6 188 chr17 52971439 52971541 -36533012 - L1ME2 LINE L1 -5443 1504 1435 248 196 18 0 chr17 52971541 52971597 -36532956 + (TA)n Simple_repeat Simple_repeat 1 57 0 1634 175 0 24 chr17 52971597 52971889 -36532664 - AluJo SINE Alu -27 285 1 746 147 0 0 chr17 52972275 52972423 -36532130 - AluSp/q SINE Alu 0 331 184 1830 134 15 8 chr17 52972443 52972733 -36531820 + AluJb SINE Alu 14 305 0 195 336 136 0 chr17 52972787 52972927 -36531626 - L3b LINE CR1 -110 1473 1315 816 161 23 0 chr17 52972953 52973083 -36531470 + FLAM_A SINE Alu 1 133 0 215 350 60 45 chr17 52973521 52973721 -36530832 - L2 LINE L2 -25 3247 3045 1452 143 114 29 chr17 52974421 52974694 -36529859 + AluJo SINE Alu 1 296 -16 2260 103 0 16 chr17 52974706 52975017 -36529536 + AluY SINE Alu 3 308 -3 971 182 6 0 chr17 52975017 52975176 -36529377 + AluJb SINE Alu 134 293 -19 452 245 61 27 chr17 52975763 52975910 -36528643 - MER5A DNA MER1_type -31 158 7 258 283 9 62 chr17 52975948 52976061 -36528492 - MER5A DNA MER1_type -29 160 54 521 96 0 17 chr17 52976080 52976358 -36528195 + AluSg SINE Alu 1 312 0 1019 207 0 25 chr17 52976505 52976708 -36527845 - AluSx SINE Alu -114 198 1 2147 133 16 3 chr17 52977445 52977754 -36526799 + 7SLRNA srpRNA srpRNA 1 313 -7 1638 191 17 10 chr17 52977865 52978164 -36526389 - AluJo SINE Alu -11 301 1 384 221 7 88 chr17 52978765 52978901 -36525652 - MIR SINE MIR -56 206 82 974 202 0 0 chr17 52979149 52979322 -36525231 - AluJb SINE Alu -20 292 120 823 89 49 0 chr17 52979322 52979445 -36525108 - AluSg/x SINE Alu -16 296 168 1790 164 6 22 chr17 52979448 52979783 -36524770 - AluSx SINE Alu 0 312 1 214 196 20 0 chr17 52979864 52979915 -36524638 + (ATG)n Simple_repeat Simple_repeat 3 54 0 435 216 207 0 chr17 52979954 52980070 -36524483 - MIR SINE MIR -44 218 79 21 0 0 0 chr17 52980302 52980323 -36524230 + AT_rich Low_complexity Low_complexity 1 21 0 2072 106 0 33 chr17 52981167 52981469 -36523084 + AluSq SINE Alu 1 292 -21 624 245 109 0 chr17 52982438 52982585 -36521968 + MER45A DNA AcHobo 16 178 0 2290 101 3 0 chr17 52982912 52983210 -36521343 - AluSc SINE Alu -10 299 1 2333 119 0 0 chr17 52983309 52983621 -36520932 + AluSq SINE Alu 1 312 -1 337 299 10 10 chr17 52983779 52983876 -36520677 + L2 LINE L2 3176 3272 0 219 321 77 65 chr17 52984456 52984578 -36519975 + MER5A DNA MER1_type 19 145 -44 2254 83 31 0 chr17 52984578 52984926 -36519627 + AluSp SINE Alu 1 313 0 219 321 77 65 chr17 52984926 52984971 -36519582 + MER5A DNA MER1_type 145 188 -1 1789 132 31 24 chr17 52985050 52985338 -36519215 + AluJo SINE Alu 1 290 -22 1425 195 60 17 chr17 52986522 52986723 -36517830 - AluJo SINE Alu 0 339 118 540 0 0 0 chr17 52986723 52986783 -36517770 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 1425 195 60 17 chr17 52986783 52986907 -36517646 - AluJo SINE Alu -221 118 1 317 309 62 0 chr17 52986966 52987063 -36517490 - MIR SINE MIR -57 205 103 424 206 111 16 chr17 52988586 52988712 -36515841 - MIR SINE MIR -21 241 104 258 136 0 0 chr17 52989220 52989264 -36515289 + (TTCC)n Simple_repeat Simple_repeat 2 45 0 506 252 55 8 chr17 52989735 52989862 -36514691 - FLAM_C SINE Alu 0 133 1 1481 134 102 39 chr17 52992334 52992618 -36511935 - AluJo SINE Alu -10 302 1 536 307 102 36 chr17 52994090 52994510 -36510043 + L1MC4a LINE L1 5297 5930 -1878 748 140 7 67 chr17 52994666 52994816 -36509737 - FLAM_C SINE Alu -1 142 2 198 171 0 0 chr17 52996782 52996823 -36507730 + A-rich Low_complexity Low_complexity 2 42 0 497 16 16 0 chr17 52996844 52996906 -36507647 + (CA)n Simple_repeat Simple_repeat 2 64 0 223 175 16 16 chr17 52998993 52999056 -36505497 + (TA)n Simple_repeat Simple_repeat 2 64 0 2176 102 28 0 chr17 52999661 52999945 -36504608 + AluSx SINE Alu 1 292 -20 285 271 21 41 chr17 53000337 53000454 -36504099 - MIR SINE MIR -65 143 37 346 237 113 32 chr17 53001037 53001223 -36503330 + L1MC5 LINE L1 7499 7699 -262 761 148 8 8 chr17 53001237 53001359 -36503194 + FLAM_C SINE Alu 12 133 -10 1195 182 133 4 chr17 53001364 53001628 -36502925 + AluJo SINE Alu 1 298 -4 201 74 0 0 chr17 53001672 53001699 -36502854 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 1254 73 0 0 chr17 53001756 53001906 -36502647 + AluY SINE Alu 36 185 -126 285 29 0 0 chr17 53001923 53001957 -36502596 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 379 246 32 8 chr17 53001970 53002096 -36502457 + L1MC5 LINE L1 7808 7936 -25 2408 100 0 0 chr17 53002097 53002397 -36502156 + AluSg SINE Alu 1 300 -10 2032 126 44 0 chr17 53002847 53003020 -36501533 - AluSx SINE Alu -5 307 114 216 0 0 0 chr17 53003020 53003044 -36501509 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2032 126 44 0 chr17 53003044 53003164 -36501389 - AluSx SINE Alu -198 114 1 1769 174 0 0 chr17 53003325 53003676 -36500877 + AluJb SINE Alu 1 351 0 504 198 9 0 chr17 53003796 53003902 -36500651 - FRAM SINE Alu -6 170 64 562 100 33 0 chr17 53003921 53004011 -36500542 - AluJ/FLAM SINE Alu -219 93 1 216 268 62 89 chr17 53004011 53004123 -36500430 + MIR SINE MIR 121 229 -33 504 220 0 0 chr17 53005724 53005842 -36498711 + CT-rich Low_complexity Low_complexity 1 118 0 2121 131 0 6 chr17 53005858 53006172 -36498381 - AluSx SINE Alu 0 312 1 1914 126 33 0 chr17 53006349 53006650 -36497903 - AluJb SINE Alu 0 343 34 305 271 47 62 chr17 53008200 53008329 -36496224 - MIR3 SINE MIR -17 191 65 322 227 168 88 chr17 53009316 53009554 -36494999 + HAL1 LINE L1 1046 1302 -1205 240 339 0 17 chr17 53009571 53009689 -36494864 + GA-rich Low_complexity Low_complexity 1 116 0 24 0 0 0 chr17 53010062 53010086 -36494467 + GC_rich Low_complexity Low_complexity 1 24 0 250 212 94 24 chr17 53010626 53010711 -36493842 - MIR SINE MIR -50 212 122 2088 153 0 6 chr17 53010830 53011143 -36493410 + AluSx SINE Alu 1 311 -1 24 32 0 0 chr17 53011413 53011444 -36493109 + AT_rich Low_complexity Low_complexity 1 31 0 1644 232 23 25 chr17 53011453 53011893 -36492660 - L1ME3 LINE L1 -8 6154 5716 1159 235 6 56 chr17 53011975 53012294 -36492259 - AluSq SINE Alu 0 303 1 1812 167 0 47 chr17 53012436 53012753 -36491800 - AluSx SINE Alu -10 302 1 427 184 35 46 chr17 53012753 53012840 -36491713 - FLAM_A SINE Alu -50 92 7 565 195 7 41 chr17 53012844 53012989 -36491564 - L1ME3 LINE L1 -432 5730 5591 842 88 20 7 chr17 53014774 53014922 -36489631 + (GA)n Simple_repeat Simple_repeat 1 150 0 195 42 0 0 chr17 53016310 53016334 -36488219 + (TG)n Simple_repeat Simple_repeat 1 24 0 27 49 0 0 chr17 53021836 53021877 -36482676 + AT_rich Low_complexity Low_complexity 1 41 0 688 183 9 0 chr17 53021912 53022027 -36482526 + FLAM_C SINE Alu 3 118 -25 1916 162 4 0 chr17 53022153 53022431 -36482122 + AluSx SINE Alu 1 279 -33 189 0 0 0 chr17 53022435 53022456 -36482097 + (TAA)n Simple_repeat Simple_repeat 2 22 0 450 120 0 0 chr17 53024524 53024599 -36479954 + (TG)n Simple_repeat Simple_repeat 2 76 0 326 314 51 15 chr17 53025879 53026016 -36478537 - L1ME4a LINE L1 -253 5868 5727 1318 173 57 85 chr17 53026031 53026349 -36478204 + AluJo SINE Alu 1 309 -3 284 193 0 0 chr17 53026370 53026427 -36478126 + Alu SINE Alu 246 302 0 25 51 0 0 chr17 53026466 53026505 -36478048 + AT_rich Low_complexity Low_complexity 1 39 0 339 236 102 0 chr17 53026595 53026722 -36477831 - L1ME4a LINE L1 -178 5943 5804 602 177 31 0 chr17 53026889 53026985 -36477568 + FRAM SINE Alu 1 94 -82 2035 142 0 22 chr17 53026985 53027296 -36477257 - AluJb SINE Alu -7 305 2 525 263 0 0 chr17 53027335 53027466 -36477087 + L1ME3 LINE L1 6004 6134 -28 28 0 0 0 chr17 53027893 53027921 -36476632 + AT_rich Low_complexity Low_complexity 1 28 0 1642 203 60 73 chr17 53028405 53028573 -36475980 - L1ME3 LINE L1 -11 6151 5982 2059 101 47 30 chr17 53028573 53028871 -36475682 - AluSx SINE Alu -9 303 1 1642 203 60 73 chr17 53028871 53029265 -36475288 - L1ME3 LINE L1 -180 5982 5596 1915 129 48 10 chr17 53029370 53029664 -36474889 - AluSx SINE Alu -7 305 1 194 0 0 37 chr17 53029664 53029691 -36474862 + (TTTC)n Simple_repeat Simple_repeat 1 26 0 2085 129 3 10 chr17 53030054 53030357 -36474196 - AluSx SINE Alu -11 301 1 2184 130 3 0 chr17 53030379 53030680 -36473873 - AluSx SINE Alu -4 308 7 2400 98 0 0 chr17 53031731 53032036 -36472517 - AluSx SINE Alu -6 306 2 1686 170 25 7 chr17 53032040 53032351 -36472202 - AluJo SINE Alu 0 316 1 29 0 0 0 chr17 53033049 53033078 -36471475 + AT_rich Low_complexity Low_complexity 1 29 0 2128 143 0 10 chr17 53033275 53033589 -36470964 + AluSx SINE Alu 1 311 -1 2259 90 14 0 chr17 53034113 53034440 -36470113 + AluSp SINE Alu 1 331 0 860 161 0 29 chr17 53034702 53034839 -36469714 - FLAM_A SINE Alu 0 133 1 328 239 302 13 chr17 53035514 53035673 -36468880 - MIR SINE MIR -25 237 33 2018 139 3 22 chr17 53035932 53036248 -36468305 - AluJb SINE Alu -2 310 1 316 286 16 63 chr17 53036319 53036445 -36468108 + L2 LINE L2 3189 3308 -5 375 217 66 26 chr17 53036455 53036607 -36467946 + L1MC4a LINE L1 5865 6022 -1786 22 0 0 0 chr17 53036705 53036727 -36467826 + AT_rich Low_complexity Low_complexity 1 22 0 265 320 17 24 chr17 53036900 53037072 -36467481 + GA-rich Low_complexity Low_complexity 2 295 0 784 170 72 67 chr17 53039108 53039194 -36465359 - MER3 DNA MER1_type 0 209 125 2428 62 7 0 chr17 53039194 53039483 -36465070 + AluSp SINE Alu 1 291 -22 180 0 0 0 chr17 53039483 53039503 -36465050 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 784 170 72 67 chr17 53039503 53039609 -36464944 - MER3 DNA MER1_type -83 126 15 188 338 62 12 chr17 53040182 53040262 -36464291 + L3b LINE CR1 1383 1466 -117 1988 110 19 0 chr17 53040475 53040738 -36463815 + AluSg SINE Alu 38 305 -5 659 199 106 21 chr17 53040755 53040896 -36463657 + AluJb SINE Alu 141 293 -19 2267 121 3 6 chr17 53040932 53041245 -36463308 + AluSx SINE Alu 1 312 0 180 319 58 29 chr17 53042025 53042094 -36462459 + MIR SINE MIR 58 128 -80 789 266 20 40 chr17 53042195 53042443 -36462110 + MIR SINE MIR 13 255 -7 261 368 25 25 chr17 53042651 53042855 -36461698 - L2 LINE L2 -183 3089 2886 1952 134 3 3 chr17 53042949 53043263 -36461290 + AluJb SINE Alu 1 314 0 741 175 24 0 chr17 53043278 53043404 -36461149 + FLAM_A SINE Alu 10 138 -4 2294 117 7 0 chr17 53043404 53043713 -36460840 + AluSp SINE Alu 1 311 -2 2272 110 13 0 chr17 53043730 53044031 -36460522 + AluSx SINE Alu 1 305 -7 2385 78 0 26 chr17 53044072 53044381 -36460172 + AluY SINE Alu 1 301 -10 2088 100 0 0 chr17 53044659 53044928 -36459625 - AluY SINE Alu -24 287 19 1834 188 70 32 chr17 53044947 53045389 -36459164 + LTR2B LTR ERV1 32 490 0 23 0 0 0 chr17 53045418 53045441 -36459112 + AT_rich Low_complexity Low_complexity 1 23 0 2328 105 0 3 chr17 53045709 53046015 -36458538 - AluSx SINE Alu -7 305 1 2200 114 17 3 chr17 53046320 53046619 -36457934 + AluSq SINE Alu 2 304 -9 242 307 0 45 chr17 53046782 53046870 -36457683 + L2 LINE L2 3229 3312 -1 2248 87 0 11 chr17 53047327 53047647 -36456906 + AluSq SINE Alu 1 317 0 1926 148 7 20 chr17 53048306 53048603 -36455950 - AluJo SINE Alu -19 293 1 1811 140 77 0 chr17 53049237 53049522 -36455031 - AluJb SINE Alu -5 307 1 2240 111 27 0 chr17 53049794 53050092 -36454461 - AluSg SINE Alu -4 306 1 483 276 92 23 chr17 53050678 53050852 -36453701 + MIR3 SINE MIR 17 202 -6 2241 109 0 3 chr17 53050953 53051256 -36453297 - AluSx SINE Alu -10 302 1 246 273 172 0 chr17 53051775 53051874 -36452679 - MIR3 SINE MIR -15 193 78 1818 125 31 60 chr17 53052559 53052878 -36451675 - AluJb SINE Alu 0 312 3 1640 99 0 9 chr17 53052994 53053217 -36451336 - AluSg/x SINE Alu -18 292 72 2087 145 3 0 chr17 53053248 53053558 -36450995 + AluJb SINE Alu 1 311 -1 907 145 297 0 chr17 53053562 53053842 -36450711 + MER31B LTR ERV1 80 485 0 1801 164 17 0 chr17 53053969 53054262 -36450291 - AluSx SINE Alu -9 303 6 1299 229 7 7 chr17 53054277 53054569 -36449984 - AluJb SINE Alu -16 296 5 2226 101 0 7 chr17 53054575 53054871 -36449682 - AluSx SINE Alu -18 294 1 806 105 0 9 chr17 53055061 53055175 -36449378 + AluSq/x SINE Alu 21 133 -180 2371 101 0 29 chr17 53055181 53055497 -36449056 + AluSx SINE Alu 3 309 -3 331 273 16 74 chr17 53055699 53055820 -36448733 + MIR3 SINE MIR 90 203 -5 1039 177 100 32 chr17 53055982 53056202 -36448351 + AluJo SINE Alu 66 300 -12 2422 72 3 0 chr17 53056209 53056500 -36448053 + AluSg SINE Alu 1 292 -18 2061 122 10 0 chr17 53057634 53057928 -36446625 - AluSx SINE Alu -15 297 1 299 217 22 43 chr17 53058122 53058214 -36446339 - MIR3 SINE MIR -37 171 82 740 131 0 97 chr17 53059471 53059616 -36444937 - FLAM_C SINE Alu 0 133 3 860 261 0 10 chr17 53059639 53059846 -36444707 - MIR SINE MIR -21 241 37 2139 117 27 0 chr17 53060702 53061002 -36443551 + AluSp SINE Alu 2 309 -4 2369 101 0 0 chr17 53061437 53061743 -36442810 - AluSx SINE Alu -6 306 1 1788 162 54 0 chr17 53062191 53062367 -36442186 - AluJb SINE Alu 0 312 112 189 0 0 0 chr17 53062367 53062388 -36442165 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1788 162 54 0 chr17 53062388 53062507 -36442046 - AluJb SINE Alu -200 112 1 354 240 214 36 chr17 53062636 53062828 -36441725 + MIR SINE MIR 21 246 -16 234 212 227 0 chr17 53063065 53063131 -36441422 - L2 LINE L2 -42 3230 3150 794 234 107 62 chr17 53063146 53063390 -36441163 - MIR SINE MIR 0 262 8 2325 105 0 10 chr17 53063780 53064084 -36440469 + AluSx SINE Alu 1 301 -11 232 273 15 0 chr17 53064169 53064235 -36440318 - Charlie8 DNA MER1_type -10 2407 2341 664 214 0 0 chr17 53064250 53064376 -36440177 + FLAM_A SINE Alu 1 126 -7 2211 122 3 25 chr17 53064403 53064722 -36439831 + AluSx SINE Alu 1 312 0 401 244 33 11 chr17 53064928 53065018 -36439535 - L1MC4 LINE L1 -1339 6703 6612 334 244 70 12 chr17 53065016 53065102 -36439451 - L1MC4 LINE L1 -1340 6702 6612 * 905 204 19 0 chr17 53065116 53065278 -36439275 - AluJb SINE Alu -8 304 140 2429 73 40 3 chr17 53065661 53065963 -36438590 - AluSp SINE Alu 0 313 1 2020 144 24 0 chr17 53065963 53066254 -36438299 - AluJo SINE Alu -14 298 1 2345 102 0 7 chr17 53066960 53067264 -36437289 + AluSx SINE Alu 1 302 -10 231 36 0 0 chr17 53067432 53067460 -36437093 + (CA)n Simple_repeat Simple_repeat 1 28 0 334 277 75 47 chr17 53067475 53067688 -36436865 + L1ME LINE L1 5604 5822 -299 2601 52 3 0 chr17 53067693 53068002 -36436551 + AluY SINE Alu 1 310 -1 2064 161 0 0 chr17 53068018 53068316 -36436237 + AluSx SINE Alu 1 298 -14 2370 95 3 13 chr17 53068439 53068755 -36435798 + AluSp SINE Alu 1 313 0 2075 144 3 7 chr17 53068756 53068771 -36435782 - AluSp SINE Alu -8 305 291 180 0 0 0 chr17 53068771 53068791 -36435762 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2075 144 3 7 chr17 53068791 53069081 -36435472 - AluSp SINE Alu -22 291 1 2202 116 3 17 chr17 53069540 53069705 -36434848 - AluSx SINE Alu -13 299 138 2296 105 3 0 chr17 53069705 53070001 -36434552 - AluSp SINE Alu -16 297 1 2202 116 3 17 chr17 53070001 53070137 -36434416 - AluSx SINE Alu -174 138 2 2113 115 41 3 chr17 53072320 53072615 -36431938 - AluSx SINE Alu -6 306 1 2148 126 3 3 chr17 53072639 53072940 -36431613 - AluSp SINE Alu -12 301 1 2351 107 0 0 chr17 53072941 53073239 -36431314 - AluSx SINE Alu -14 298 1 691 31 20 20 chr17 53073674 53073772 -36430781 + (TTTC)n Simple_repeat Simple_repeat 3 100 0 1497 124 18 5 chr17 53073772 53073990 -36430563 - AluJb SINE Alu -32 280 60 195 313 9 52 chr17 53075536 53075651 -36428902 - MIR SINE MIR -69 139 30 504 316 44 29 chr17 53075696 53075902 -36428651 - MIR SINE MIR -51 211 3 1899 124 31 34 chr17 53076705 53076996 -36427557 + AluJb SINE Alu 17 306 -6 1571 170 6 79 chr17 53077049 53077230 -36427323 - AluJo SINE Alu -7 305 157 2174 139 0 0 chr17 53077230 53077524 -36427029 - AluSx SINE Alu -16 296 3 1571 170 6 79 chr17 53077524 53077671 -36426882 - AluJo SINE Alu -155 157 1 1877 182 0 13 chr17 53077681 53077989 -36426564 - AluJo SINE Alu -8 304 1 2208 118 3 3 chr17 53078000 53078304 -36426249 - AluSq SINE Alu -9 304 1 286 277 133 7 chr17 53078308 53078462 -36426091 - MIR SINE MIR -51 211 36 567 258 174 5 chr17 53078846 53079036 -36425517 - MIR SINE MIR -12 250 29 2341 107 3 0 chr17 53079172 53079470 -36425083 - AluSg SINE Alu -10 300 2 2433 97 0 0 chr17 53080457 53080765 -36423788 - AluSc SINE Alu -1 308 1 414 255 71 7 chr17 53080832 53080973 -36423580 - MIR SINE MIR -93 169 20 409 264 55 77 chr17 53081258 53081440 -36423113 + MIR SINE MIR 17 194 -68 833 241 45 15 chr17 53081963 53082162 -36422391 - MIR SINE MIR -56 206 2 1270 118 0 21 chr17 53082196 53082382 -36422171 - AluSq SINE Alu -12 301 120 432 266 18 0 chr17 53083580 53083689 -36420864 + MER81 DNA DNA 4 114 0 346 203 0 25 chr17 53083783 53083862 -36420691 + MER5B DNA MER1_type 102 178 0 2379 102 0 7 chr17 53085954 53086258 -36418295 + AluSx SINE Alu 1 302 -10 558 260 116 6 chr17 53086262 53086435 -36418118 + MIR SINE MIR 44 235 -27 295 294 14 26 chr17 53087045 53087185 -36417368 - MIR SINE MIR -62 146 9 184 344 48 24 chr17 53087535 53087660 -36416893 + L3b LINE CR1 1325 1452 -131 210 213 21 0 chr17 53087665 53087712 -36416841 - L2 LINE L2 0 3313 3266 1850 160 3 20 chr17 53088116 53088422 -36416131 + AluJb SINE Alu 3 303 -9 2305 76 14 7 chr17 53088681 53088972 -36415581 + AluSg1 SINE Alu 1 293 -16 284 304 7 37 chr17 53090870 53091005 -36413548 + MIR3 SINE MIR 1 131 -77 1361 213 44 80 chr17 53091112 53091385 -36413168 - MLT1C LTR MaLR -9 458 208 1821 137 69 0 chr17 53091385 53091662 -36412891 - AluJb SINE Alu -16 296 1 1361 213 44 80 chr17 53091662 53091863 -36412690 - MLT1C LTR MaLR -259 208 1 33 0 0 23 chr17 53092052 53092073 -36412480 + AT_rich Low_complexity Low_complexity 1 21 -22 2183 132 3 0 chr17 53092073 53092368 -36412185 + AluSx SINE Alu 1 296 -16 33 0 0 23 chr17 53092368 53092390 -36412163 + AT_rich Low_complexity Low_complexity 21 43 0 446 244 29 113 chr17 53092584 53092790 -36411763 + MER112 DNA MER1_type 1 180 -80 2329 117 3 0 chr17 53092790 53093097 -36411456 + AluSx SINE Alu 1 308 -4 446 244 29 113 chr17 53093097 53093165 -36411388 + MER112 DNA MER1_type 180 252 -8 697 197 7 13 chr17 53093195 53093347 -36411206 + L1MB2 LINE L1 5087 5237 -909 1094 76 0 0 chr17 53093348 53093480 -36411073 + AluSq/x SINE Alu 1 132 -180 1740 114 0 0 chr17 53093481 53093708 -36410845 + AluSg/x SINE Alu 85 311 -1 3458 153 23 18 chr17 53093714 53093746 -36410807 + L1MB2 LINE L1 5224 5254 -917 2094 159 22 3 chr17 53093746 53094104 -36410449 - MLT1A1 LTR MaLR 0 365 1 3458 153 23 18 chr17 53094104 53094456 -36410097 + L1MB2 LINE L1 5254 5609 -562 2131 137 3 3 chr17 53094456 53094763 -36409790 + AluSx SINE Alu 1 307 -5 3458 153 23 18 chr17 53094763 53095067 -36409486 + L1MB2 LINE L1 5609 5910 -261 195 239 174 83 chr17 53095267 53095376 -36409177 - L2 LINE L2 -3 3269 3151 1095 101 5 77 chr17 53145641 53145849 -36358704 - L1MA5A LINE L1 -1 6296 6104 1009 138 0 50 chr17 53145849 53146008 -36358545 - AluSg/x SINE Alu -28 284 134 2234 119 0 10 chr17 53146008 53146319 -36358234 - AluSx SINE Alu -4 308 1 371 216 11 0 chr17 53146321 53146409 -36358144 - L1MA5A LINE L1 -176 6121 6033 468 45 15 0 chr17 53146540 53146606 -36357947 - MER41B LTR ERV1 -88 547 481 874 89 0 0 chr17 53146606 53146730 -36357823 + MER41B LTR ERV1 512 635 0 7493 127 36 31 chr17 53146730 53147034 -36357519 + MER41B-int LTR ERV1 1 302 -5644 2421 89 0 3 chr17 53147034 53147337 -36357216 + AluSc SINE Alu 1 302 -7 7493 127 36 31 chr17 53147337 53148273 -36356280 + MER41B-int LTR ERV1 302 1247 -4699 307 350 19 45 chr17 53148373 53148530 -36356023 + HAL1 LINE L1 1310 1462 -1045 1323 101 79 0 chr17 53148530 53148719 -36355834 + AluSg SINE Alu 1 204 -106 314 113 19 0 chr17 53148820 53148873 -36355680 - Alu SINE Alu -248 55 2 911 164 9 93 chr17 53148894 53149119 -36355434 - MLT1D LTR MaLR -295 210 5 2217 104 0 0 chr17 53149447 53149725 -36354828 + AluSq SINE Alu 1 278 -35 388 134 93 31 chr17 53149931 53150028 -36354525 + MER115 DNA AcHobo 555 657 -36 1735 150 92 0 chr17 53150028 53150301 -36354252 - AluJb SINE Alu -14 298 1 260 183 33 0 chr17 53150301 53150361 -36354192 + MLT1K LTR MaLR 527 588 0 2368 75 0 43 chr17 53150855 53151177 -36353376 - AluSc SINE Alu -1 308 1 514 97 0 0 chr17 53151177 53151249 -36353304 + MER30 DNA MER1_type 126 197 -33 952 62 0 0 chr17 53152228 53152340 -36352213 - AluSq/x SINE Alu -200 112 1 2369 163 21 17 chr17 53153860 53154232 -36350321 - L1MB7 LINE L1 -326 5858 5482 2477 82 0 0 chr17 53154232 53154536 -36350017 - AluY SINE Alu -7 304 1 2369 163 21 17 chr17 53154536 53154643 -36349910 - L1MB7 LINE L1 -702 5482 5377 397 152 30 40 chr17 53154657 53154756 -36349797 - HsTC2 DNA Tc2 -129 1769 1672 189 0 0 0 chr17 53154775 53154796 -36349757 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2059 128 4 0 chr17 53154799 53155073 -36349480 - AluSx SINE Alu -37 275 1 820 200 0 109 chr17 53155017 53155075 -36349478 - AluJo SINE Alu -121 191 128 25 31 0 0 chr17 53155075 53155107 -36349446 + AT_rich Low_complexity Low_complexity 1 32 0 820 200 0 109 chr17 53155107 53155227 -36349326 - AluJo SINE Alu -184 128 5 2315 101 0 16 chr17 53155243 53155549 -36349004 - AluSq SINE Alu -6 307 7 392 195 41 61 chr17 53155715 53155868 -36348685 + L1ME3 LINE L1 5867 6016 -154 231 114 0 0 chr17 53155871 53155906 -36348647 + MER3 DNA MER1_type 15 49 -160 313 250 0 46 chr17 53155906 53156014 -36348539 + L1ME3 LINE L1 6055 6157 -5 705 156 8 39 chr17 53156034 53156162 -36348391 + FLAM_C SINE Alu 1 124 -9 831 189 0 0 chr17 53156277 53156409 -36348144 + FLAM_C SINE Alu 2 133 0 2225 107 7 0 chr17 53156448 53156747 -36347806 - AluSp SINE Alu -12 301 1 2370 86 3 0 chr17 53157134 53157426 -36347127 - AluSp SINE Alu -20 293 1 2167 135 3 3 chr17 53157724 53158036 -36346517 + AluSx SINE Alu 1 312 0 2162 124 20 0 chr17 53159173 53159471 -36345082 - AluSx SINE Alu -4 308 5 28 29 0 0 chr17 53159511 53159546 -36345007 + AT_rich Low_complexity Low_complexity 1 35 0 206 231 15 0 chr17 53159609 53159674 -36344879 + (TA)n Simple_repeat Simple_repeat 1 66 0 2077 157 0 3 chr17 53159823 53160178 -36344375 + AluJb SINE Alu 1 354 0 512 108 0 0 chr17 53160889 53160954 -36343599 + AluS SINE Alu 2 66 -246 2393 95 0 0 chr17 53161091 53161385 -36343168 + AluSc SINE Alu 1 294 -15 235 307 59 10 chr17 53161490 53161591 -36342962 - L1ME LINE L1 -322 5840 5735 2215 103 3 17 chr17 53161679 53161979 -36342574 + AluSx SINE Alu 1 296 -16 572 302 97 16 chr17 53161998 53162369 -36342184 - L1ME LINE L1 -450 5720 5320 6743 49 3 26 chr17 53162398 53163255 -36341298 + SVA Other Other 549 1386 0 2650 4 0 0 chr17 53163408 53163688 -36340865 + AluYa5 SINE Alu 1 280 -31 50 42 0 0 chr17 53163794 53163865 -36340688 + AT_rich Low_complexity Low_complexity 1 71 0 375 280 65 13 chr17 53164067 53164269 -36340284 - L1MC/D LINE L1 -369 5752 5585 689 0 0 0 chr17 53165006 53165079 -36339474 + tRNA-Gln-CAA tRNA tRNA 1 73 -2 2413 93 0 0 chr17 53165663 53165975 -36338578 + AluSx SINE Alu 1 312 0 212 98 0 24 chr17 53166019 53166060 -36338493 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 317 190 40 0 chr17 53166086 53166186 -36338367 + GA-rich Low_complexity Low_complexity 1 104 0 491 298 0 34 chr17 53166674 53166879 -36337674 + L1M4 LINE L1 4708 4905 -1241 233 172 17 17 chr17 53166902 53166960 -36337593 + CT-rich Low_complexity Low_complexity 1 58 0 1057 167 12 0 chr17 53166960 53167122 -36337431 - FRAM SINE Alu -9 167 4 2015 128 13 3 chr17 53167226 53167530 -36337023 + AluYa5 SINE Alu 5 311 0 2323 105 0 0 chr17 53167592 53167887 -36336666 + AluSc SINE Alu 1 295 -14 1637 204 3 7 chr17 53168221 53168515 -36336038 + AluJb SINE Alu 1 293 -19 1999 87 8 11 chr17 53168518 53168783 -36335770 + AluSx SINE Alu 1 264 -48 680 197 125 33 chr17 53169101 53169253 -36335300 + FRAM SINE Alu 1 166 0 1976 159 3 13 chr17 53169255 53169569 -36334984 + AluJb SINE Alu 1 311 -1 2216 120 0 3 chr17 53169633 53169933 -36334620 - AluSx SINE Alu -13 299 1 754 119 18 0 chr17 53170136 53170245 -36334308 - AluSg/x SINE Alu -17 295 185 481 214 36 65 chr17 53170406 53170503 -36334050 + REP3 LTR ERV 400 491 -71 2318 89 3 0 chr17 53170503 53170794 -36333759 - AluSg SINE Alu -18 292 1 481 214 36 65 chr17 53170794 53170864 -36333689 + REP3 LTR ERV 491 562 0 264 182 182 0 chr17 53170922 53170988 -36333565 + FRAM/FAM SINE Alu 1 77 -89 36 0 0 0 chr17 53171005 53171041 -36333512 + AT_rich Low_complexity Low_complexity 1 36 0 1586 154 24 50 chr17 53171252 53171386 -36333167 + AluJb SINE Alu 1 137 -175 2467 42 0 3 chr17 53171386 53171709 -36332844 + AluY SINE Alu 1 322 0 1586 154 24 50 chr17 53171709 53171912 -36332641 + AluJb SINE Alu 137 312 0 309 44 111 0 chr17 53172297 53172342 -36332211 - MER66B LTR ERV1 -142 344 295 628 284 68 36 chr17 53172384 53172606 -36331947 + HERVL40 LTR ERVL 2109 2337 -3193 258 234 0 0 chr17 53172700 53172764 -36331789 - MLT1D LTR MaLR -2 503 440 1274 195 19 8 chr17 53173471 53173728 -36330825 - MLT1D LTR MaLR -11 494 235 1436 118 9 28 chr17 53173733 53173968 -36330585 - AluSg/x SINE Alu 0 304 74 2048 126 7 23 chr17 53175158 53175467 -36329086 - AluSq SINE Alu -9 304 1 1702 171 13 17 chr17 53175521 53175819 -36328734 - AluJo SINE Alu -15 297 1 1443 64 0 27 chr17 53176249 53176437 -36328116 - AluY SINE Alu -4 307 125 973 193 0 0 chr17 53176567 53176733 -36327820 - FRAM SINE Alu -15 161 1 628 269 168 10 chr17 53176853 53177162 -36327391 + L1ME LINE L1 5342 5699 -465 889 126 0 30 chr17 53177163 53177298 -36327255 + FLAM_C SINE Alu 1 131 -2 364 230 81 0 chr17 53177335 53177409 -36327144 + L3 LINE CR1 1041 1120 -457 427 284 108 6 chr17 53177414 53177590 -36326963 + MIR SINE MIR 67 260 -2 378 243 226 18 chr17 53177587 53177813 -36326740 + L3 LINE CR1 1130 1402 -175 * 1688 208 104 88 chr17 53177825 53177945 -36326608 - LTR8A LTR ERV1 0 727 610 2300 116 0 0 chr17 53177945 53178246 -36326307 - AluSx SINE Alu -11 301 1 1688 208 104 88 chr17 53178246 53178808 -36325745 - LTR8A LTR ERV1 -117 610 34 263 317 41 14 chr17 53178829 53178974 -36325579 + L3 LINE CR1 1420 1568 -9 330 232 8 72 chr17 53179041 53179166 -36325387 + MER112 DNA MER1_type 4 120 -140 229 61 0 0 chr17 53179163 53179196 -36325357 + HY3 scRNA scRNA 69 101 0 * 27 29 0 0 chr17 53179208 53179242 -36325311 + AT_rich Low_complexity Low_complexity 1 34 0 487 145 13 13 chr17 53179247 53179323 -36325230 + AluJ/FLAM SINE Alu 6 81 -231 2115 111 10 16 chr17 53179424 53179730 -36324823 - AluSx SINE Alu -8 304 1 232 173 19 19 chr17 53179732 53179784 -36324769 + L1M4 LINE L1 2677 2728 -3418 507 130 61 52 chr17 53180228 53180343 -36324210 - MLT2B3 LTR ERVL -264 290 175 364 376 30 0 chr17 53180456 53180658 -36323895 - HERVL LTR ERVL -792 4972 4765 1143 261 163 59 chr17 53180699 53181307 -36323246 + MER115 DNA AcHobo 21 691 -2 1278 285 42 24 chr17 53181335 53181872 -36322681 - HERVL LTR ERVL -868 4617 4076 713 322 27 61 chr17 53181868 53181902 -36322651 - HERVL LTR ERVL -1329 4435 4401 * 2102 144 60 8 chr17 53181902 53182255 -36322298 + THE1C LTR MaLR 1 371 -4 713 322 27 61 chr17 53182255 53182621 -36321932 - HERVL LTR ERVL -1363 4401 4049 2656 144 19 9 chr17 53182621 53183045 -36321508 + MSTA LTR MaLR 1 428 0 713 322 27 61 chr17 53183045 53183087 -36321466 - HERVL LTR ERVL -1715 4049 4007 28 50 0 17 chr17 53183109 53183128 -36321425 + AT_rich Low_complexity Low_complexity 1 19 -40 270 0 0 0 chr17 53183128 53183158 -36321395 + (TA)n Simple_repeat Simple_repeat 1 30 0 28 50 0 17 chr17 53183158 53183198 -36321355 + AT_rich Low_complexity Low_complexity 19 59 0 2295 121 3 0 chr17 53183198 53183504 -36321049 + AluSx SINE Alu 1 307 -5 553 246 40 49 chr17 53183505 53183729 -36320824 - HERVL LTR ERVL -1506 3979 3758 723 150 0 6 chr17 53184096 53184344 -36320209 + AluJ SINE Alu 1 295 -17 2451 91 0 0 chr17 53184344 53184653 -36319900 + AluSg1 SINE Alu 1 309 0 1856 109 107 132 chr17 53184814 53185253 -36319300 + MSTA LTR MaLR 1 428 0 858 262 141 37 chr17 53185318 53185673 -36318880 - LTR16C LTR ERVL -10 481 90 1579 180 16 42 chr17 53185832 53186143 -36318410 - AluJb SINE Alu -9 303 1 801 164 23 0 chr17 53186931 53187059 -36317494 + FLAM_C SINE Alu 3 133 0 1042 158 238 0 chr17 53187254 53187456 -36317097 - AluJb SINE Alu -12 300 51 1436 328 20 59 chr17 53187989 53188379 -36316174 - THE1C LTR MaLR 0 375 1 2642 52 0 0 chr17 53188484 53188789 -36315764 + AluY SINE Alu 1 305 -6 1541 153 32 60 chr17 53188975 53189289 -36315264 - AluJo SINE Alu -7 305 1 235 215 28 4 chr17 53189289 53189381 -36315172 - AluJo SINE Alu -167 135 1 * 1191 105 4 105 chr17 53189381 53189477 -36315076 + LTR23 LTR ERV1 222 281 -156 2102 116 11 11 chr17 53189477 53189806 -36314747 + AluSx SINE Alu 1 329 0 1191 105 4 105 chr17 53189806 53189949 -36314604 + LTR23 LTR ERV1 281 437 0 26 64 0 0 chr17 53190180 53190227 -36314326 + AT_rich Low_complexity Low_complexity 1 47 0 598 114 0 0 chr17 53190408 53190487 -36314066 - AluS SINE Alu -233 80 2 2051 133 41 0 chr17 53191215 53191508 -36313045 + AluSx SINE Alu 1 305 -7 2107 133 3 0 chr17 53191513 53191798 -36312755 + AluSx SINE Alu 6 291 -21 262 161 75 0 chr17 53191798 53191891 -36312662 + (TA)n Simple_repeat Simple_repeat 1 100 0 2426 70 3 16 chr17 53191902 53192214 -36312339 - AluY SINE Alu -3 308 1 1201 167 53 4 chr17 53192214 53192459 -36312094 - L1MB3 LINE L1 -32 6151 5895 183 261 34 68 chr17 53192613 53192701 -36311852 - L2 LINE L2 -218 3054 2970 1833 153 6 40 chr17 53193338 53193514 -36311039 - AluJb SINE Alu -2 310 148 2233 107 14 3 chr17 53193514 53193805 -36310748 - AluSx SINE Alu -18 294 1 1833 153 6 40 chr17 53193805 53193949 -36310604 - AluJb SINE Alu -164 148 1 202 183 254 56 chr17 53194007 53194078 -36310475 + L2 LINE L2 3173 3257 -56 838 288 111 57 chr17 53194181 53194612 -36309941 - L2 LINE L2 -706 2608 2135 1688 103 4 17 chr17 53194612 53194845 -36309708 + AluSg/x SINE Alu 74 303 -9 838 288 111 57 chr17 53194845 53194997 -36309556 - L2 LINE L2 -1179 2135 1993 2245 111 0 7 chr17 53195498 53195827 -36308726 - AluSg SINE Alu 0 310 1 2341 108 0 0 chr17 53197180 53197476 -36307077 + AluSx SINE Alu 1 296 -16 425 191 0 0 chr17 53197618 53197686 -36306867 + AluJb SINE Alu 150 217 -95 272 95 0 0 chr17 53197786 53197828 -36306725 + Alu SINE Alu 256 297 -3 339 120 0 0 chr17 53197832 53197882 -36306671 - FLAM_A SINE Alu -16 117 68 2100 97 0 4 chr17 53198419 53198716 -36305837 + AluSx SINE Alu 16 311 0 254 211 79 0 chr17 53198747 53198823 -36305730 - MLT1H LTR MaLR 0 542 461 687 245 154 22 chr17 53198910 53199228 -36305325 - MLT1H LTR MaLR -189 360 1 2532 93 0 0 chr17 53199481 53199792 -36304761 + AluSp SINE Alu 1 311 -2 398 248 7 72 chr17 53200060 53200095 -36304458 + L2 LINE L2 1895 1931 -1383 3271 151 66 14 chr17 53200095 53200492 -36304061 - LTR26E LTR ERV1 0 622 247 2435 75 7 0 chr17 53200492 53200785 -36303768 - AluSq SINE Alu -18 295 1 1964 120 9 62 chr17 53200790 53201114 -36303439 - AluJb SINE Alu -5 307 1 3271 151 66 14 chr17 53201114 53201301 -36303252 - LTR26E LTR ERV1 -378 244 1 398 248 7 72 chr17 53201301 53201366 -36303187 + L2 LINE L2 1931 1984 -1330 2536 156 42 2 chr17 53201366 53201776 -36302777 + MSTB LTR MaLR 1 426 0 398 248 7 72 chr17 53201776 53201827 -36302726 + L2 LINE L2 1984 2037 -1277 3146 150 57 63 chr17 53201829 53202342 -36302211 - LTR8A LTR ERV1 0 727 218 2462 60 0 17 chr17 53202342 53202644 -36301909 - AluY SINE Alu -14 297 1 3146 150 57 63 chr17 53202644 53202828 -36301725 - LTR8A LTR ERV1 -509 218 34 1859 145 291 24 chr17 53202851 53203342 -36301211 + LTR29 LTR ERV1 1 622 0 2397 181 102 20 chr17 53203355 53204008 -36300545 - LTR28 LTR ERV1 0 636 1 423 293 17 17 chr17 53204029 53204145 -36300408 + L2 LINE L2 3193 3308 -5 240 193 0 57 chr17 53204650 53204738 -36299815 + L1M4 LINE L1 5100 5182 -964 2182 96 101 46 chr17 53204739 53204905 -36299648 + THE1B LTR MaLR 1 156 -208 2178 110 4 0 chr17 53204905 53205186 -36299367 + AluSx SINE Alu 1 282 -30 1445 109 0 0 chr17 53204994 53205186 -36299367 + AluSg/x SINE Alu 89 311 0 259 32 0 0 chr17 53205186 53205217 -36299336 + (TAAA)n Simple_repeat Simple_repeat 2 92 0 2182 96 101 46 chr17 53205217 53205394 -36299159 + THE1B LTR MaLR 155 364 0 7610 119 22 57 chr17 53205408 53206718 -36297835 - MER52C LTR ERV1 -13 1265 2 11271 82 28 36 chr17 53206718 53207256 -36297297 + THE1B-int LTR MaLR 5 546 -1034 1908 127 0 0 chr17 53207256 53207552 -36297001 + AluSx SINE Alu 16 311 0 11271 82 28 36 chr17 53207552 53208602 -36295951 + THE1B-int LTR MaLR 546 1580 0 2184 111 102 15 chr17 53208603 53208937 -36295616 + THE1B LTR MaLR 2 364 0 2000 135 23 0 chr17 53208962 53209266 -36295287 + AluSx SINE Alu 1 311 -1 857 216 17 6 chr17 53210469 53210645 -36293908 - MER45A DNA AcHobo 0 178 1 915 292 118 9 chr17 53211648 53212227 -36292326 + HERVL LTR ERVL 3835 4557 -1207 1367 131 22 0 chr17 53212235 53212457 -36292096 + L1MD3 LINE L1 7755 7981 -14 322 322 85 44 chr17 53212472 53212789 -36291764 + HERVL LTR ERVL 4545 4874 -890 2034 132 3 3 chr17 53212831 53213142 -36291411 + AluSp SINE Alu 2 312 -1 545 41 0 14 chr17 53213142 53213215 -36291338 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 216 327 71 49 chr17 53213994 53214220 -36290333 + L2 LINE L2 2439 2669 -645 1780 153 0 4 chr17 53214238 53214519 -36290034 + AluJo SINE Alu 1 280 -32 246 293 120 30 chr17 53214669 53214836 -36289717 + L2 LINE L2 2877 3058 -214 22249 72 55 42 chr17 53215082 53215706 -36288847 - LTR19A-int LTR ERV1 -2278 3308 2693 7267 113 35 39 chr17 53215706 53217038 -36287515 + SVA Other Other 61 1386 0 22249 72 55 42 chr17 53217038 53217160 -36287393 - LTR19A-int LTR ERV1 -2893 2693 2574 1554 129 3 145 chr17 53217160 53217525 -36287028 - AluSp SINE Alu 0 313 1 22249 72 55 42 chr17 53217525 53220045 -36284508 - LTR19A-int LTR ERV1 -3012 2574 1 3022 70 111 7 chr17 53220045 53220485 -36284068 - LTR19A LTR ERV1 0 486 1 1160 254 110 29 chr17 53220792 53220877 -36283676 + LTR47B LTR ERVL 1 78 -365 2089 112 3 3 chr17 53220877 53221171 -36283382 + AluSx SINE Alu 1 294 -18 1160 254 110 29 chr17 53221171 53221495 -36283058 + LTR47B LTR ERVL 78 443 0 259 346 43 9 chr17 53221505 53221640 -36282913 + MIR SINE MIR 5 143 -65 225 0 0 0 chr17 53221984 53222009 -36282544 + (A)n Simple_repeat Simple_repeat 1 25 0 1844 150 0 26 chr17 53222019 53222332 -36282221 - AluSx SINE Alu -7 305 1 1442 168 52 35 chr17 53222373 53222659 -36281894 + AluJo SINE Alu 2 292 -10 2105 112 0 0 chr17 53223128 53223456 -36281097 - AluSq SINE Alu 0 328 1 2240 156 39 16 chr17 53223819 53224202 -36280351 + MSTD LTR MaLR 4 423 -3 438 298 122 38 chr17 53225073 53225205 -36279348 + MIR SINE MIR 5 124 -138 2017 111 3 0 chr17 53225205 53225532 -36279021 + AluSx SINE Alu 1 312 0 438 298 122 38 chr17 53225532 53225637 -36278916 + MIR SINE MIR 124 262 0 254 259 58 22 chr17 53225707 53225846 -36278707 - L1M4 LINE L1 -1901 4245 4102 1590 161 45 0 chr17 53225849 53226135 -36278418 - AluSx SINE Alu -13 299 1 1527 188 18 0 chr17 53226142 53226424 -36278129 - AluJo SINE Alu -24 288 2 41 0 0 0 chr17 53226641 53226682 -36277871 + AT_rich Low_complexity Low_complexity 1 41 0 2310 86 0 0 chr17 53226707 53227008 -36277545 - AluY SINE Alu -9 302 2 442 323 110 53 chr17 53227021 53227335 -36277218 - L1M4 LINE L1 -3490 2656 2313 2305 65 10 0 chr17 53227335 53227626 -36276927 - AluSc SINE Alu -15 294 1 442 323 110 53 chr17 53227626 53227710 -36276843 - L1M4 LINE L1 -3833 2313 2235 180 0 0 0 chr17 53228995 53229015 -36275538 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1628 190 0 13 chr17 53229017 53229333 -36275220 + AluJo SINE Alu 1 312 0 2348 103 0 0 chr17 53229576 53229933 -36274620 + AluSx SINE Alu 1 357 0 1330 198 76 42 chr17 53230233 53230475 -36274078 - MSTD LTR MaLR 0 396 135 1960 138 0 16 chr17 53230475 53230787 -36273766 + AluSx SINE Alu 1 307 -5 1330 198 76 42 chr17 53230787 53230927 -36273626 - MSTD LTR MaLR -261 135 1 398 303 167 0 chr17 53231094 53231226 -36273327 + MIR SINE MIR 12 165 -97 837 84 0 0 chr17 53231231 53231338 -36273215 + AluSq/x SINE Alu 5 111 -201 2929 108 22 22 chr17 53231339 53231783 -36272770 - MLT2A1 LTR ERVL 0 444 1 9562 52 9 0 chr17 53231783 53232916 -36271637 - HERVL-A1 LTR ERVL 0 5654 4512 988 170 0 0 chr17 53232916 53233081 -36271472 - AluSp SINE Alu -9 304 140 15671 53 11 1 chr17 53233185 53235095 -36269458 + LTR19A-int LTR ERV1 3657 5586 0 3161 62 112 5 chr17 53235095 53235534 -36269019 + LTR19A LTR ERV1 1 486 0 281 247 117 0 chr17 53236157 53236234 -36268319 + L2 LINE L2 3227 3312 -1 434 272 102 94 chr17 53236551 53236588 -36267965 + L2 LINE L2 2940 2975 -338 1788 143 0 14 chr17 53236588 53236867 -36267686 + AluSx SINE Alu 1 275 -37 468 35 0 0 chr17 53236871 53236929 -36267624 + (CA)n Simple_repeat Simple_repeat 1 58 0 434 272 102 94 chr17 53236929 53237257 -36267296 + L2 LINE L2 2977 3313 0 216 304 25 0 chr17 53237261 53237340 -36267213 - MIR SINE MIR -62 200 120 892 240 87 4 chr17 53237704 53237933 -36266620 + MIR SINE MIR 15 262 0 1993 134 0 0 chr17 53238004 53238307 -36266246 + AluSx SINE Alu 1 303 0 22 35 0 0 chr17 53238857 53238886 -36265667 + AT_rich Low_complexity Low_complexity 1 29 0 1312 171 0 0 chr17 53238886 53239102 -36265451 + AluJb SINE Alu 86 301 -11 1351 266 95 21 chr17 53239150 53239635 -36264918 - LTR33 LTR ERVL 0 521 1 483 241 110 119 chr17 53239685 53239813 -36264740 - MLT1J2 LTR MaLR -44 406 278 2169 94 0 3 chr17 53239813 53240110 -36264443 + AluSx SINE Alu 1 296 -16 483 241 110 119 chr17 53240110 53240326 -36264227 - MLT1J2 LTR MaLR -172 278 65 938 183 23 17 chr17 53241105 53241280 -36263273 + LTR44 LTR ERV1 265 440 -79 447 185 0 3 chr17 53241466 53241610 -36262943 + AluJo SINE Alu 1 183 -129 294 290 0 0 chr17 53242912 53242981 -36261572 + LTR44-int LTR ERV1 150 218 -4429 851 101 15 58 chr17 53243090 53243172 -36261381 - L1MA4 LINE L1 -81 6219 6135 2121 118 0 3 chr17 53243172 53243469 -36261084 + AluSg SINE Alu 1 296 -14 851 101 15 58 chr17 53243469 53243590 -36260963 - L1MA4 LINE L1 -165 6135 5975 1759 132 0 15 chr17 53243591 53243863 -36260690 + L1MA4 LINE L1 5667 5934 -366 321 282 51 47 chr17 53244170 53244404 -36260149 + MER66-int LTR ERV1 3819 4053 -4373 378 328 65 63 chr17 53244505 53245031 -36259522 + MER66-int LTR ERV1 3381 4671 -2896 1869 122 3 55 chr17 53245071 53245382 -36259171 + AluJb SINE Alu 2 296 -16 1632 91 22 35 chr17 53245401 53245632 -36258921 - MER30 DNA MER1_type 0 230 3 733 333 25 28 chr17 53246160 53246556 -36257997 + MER66-int LTR ERV1 2142 2536 -2111 877 112 0 0 chr17 53246906 53247022 -36257531 + FLAM_C SINE Alu 1 116 -17 350 336 31 35 chr17 53247571 53247645 -36256908 + MER70-int LTR ERVL 4475 4725 -294 481 275 45 28 chr17 53247645 53247823 -36256730 + MER66-int LTR ERV1 6080 6260 -416 509 165 0 0 chr17 53248284 53248392 -36256161 - AluSg/x SINE Alu 0 314 207 2069 191 95 43 chr17 53248421 53248877 -36255676 + LTR44 LTR ERV1 1 486 -33 634 215 8 23 chr17 53248877 53248999 -36255554 + FLAM_A SINE Alu 5 126 -176 369 0 0 0 chr17 53248999 53249040 -36255513 + (TG)n Simple_repeat Simple_repeat 2 42 0 2069 191 95 43 chr17 53249047 53249083 -36255470 + LTR44 LTR ERV1 486 519 0 1093 231 29 4 chr17 53249171 53249409 -36255144 + MIR SINE MIR 3 246 -16 232 207 134 61 chr17 53250401 53250483 -36254070 + MIR SINE MIR 41 128 -80 235 276 0 0 chr17 53250594 53250652 -36253901 + L3 LINE CR1 693 750 -827 817 317 54 5 chr17 53250820 53251208 -36253345 + L2 LINE L2 1520 1926 -1388 2076 117 3 0 chr17 53251329 53251627 -36252926 - AluSx SINE Alu -13 299 1 805 272 37 51 chr17 53251653 53252014 -36252539 + MLT1H LTR MaLR 47 376 -33 228 94 31 0 chr17 53251988 53252020 -36252533 + MLT1H LTR MaLR 501 533 -16 * 1916 134 7 3 chr17 53252115 53252421 -36252132 - AluJb SINE Alu -5 307 1 1917 86 64 4 chr17 53253042 53253322 -36251231 + AluSc SINE Alu 1 297 -12 304 152 58 12 chr17 53253336 53253666 -36250887 + (TA)n Simple_repeat Simple_repeat 1 345 0 250 93 74 31 chr17 53253705 53253867 -36250686 + (TA)n Simple_repeat Simple_repeat 1 169 0 225 0 0 0 chr17 53253904 53253929 -36250624 + (CA)n Simple_repeat Simple_repeat 2 26 0 1756 141 3 40 chr17 53254118 53254304 -36250249 - AluJb SINE Alu -19 293 121 219 36 0 0 chr17 53254304 53254332 -36250221 + (TG)n Simple_repeat Simple_repeat 2 29 0 1756 141 3 40 chr17 53254332 53254449 -36250104 - AluJb SINE Alu -191 121 1 912 156 0 0 chr17 53255575 53255703 -36248850 + FLAM_C SINE Alu 6 133 -10 573 265 61 124 chr17 53255793 53255888 -36248665 - MLT1J LTR MaLR -80 431 332 1946 152 7 3 chr17 53255888 53256184 -36248369 - AluJb SINE Alu -15 297 1 573 265 61 124 chr17 53256184 53256336 -36248217 - MLT1J LTR MaLR -179 332 172 2879 3 0 13 chr17 53256336 53256646 -36247907 - AluY SINE Alu -5 306 1 573 265 61 124 chr17 53256646 53256857 -36247696 - MLT1J LTR MaLR -339 172 1 2247 131 3 0 chr17 53257101 53257407 -36247146 + AluSx SINE Alu 3 309 -3 914 230 53 148 chr17 53257510 53257803 -36246750 + L1MEd LINE L1 741 1060 -5145 2081 148 3 0 chr17 53257803 53258108 -36246445 + AluSx SINE Alu 3 308 -4 914 230 53 148 chr17 53258108 53258250 -36246303 + L1MEd LINE L1 1060 1116 -5089 1858 157 3 28 chr17 53258250 53258569 -36245984 + AluJb SINE Alu 1 311 -1 914 230 53 148 chr17 53258569 53258680 -36245873 + L1MEd LINE L1 1116 1236 -4969 2334 114 0 13 chr17 53258689 53259005 -36245548 + AluSx SINE Alu 1 312 0 2403 110 0 0 chr17 53259010 53259320 -36245233 + AluSg SINE Alu 1 310 0 2541 62 19 10 chr17 53259371 53259678 -36244875 + AluSx SINE Alu 3 312 0 1172 53 0 0 chr17 53259690 53259822 -36244731 + AluY SINE Alu 1 132 -179 328 268 105 52 chr17 53259837 53259990 -36244563 + HAL1 LINE L1 1299 1459 -1048 1021 166 197 31 chr17 53260026 53260285 -36244268 - AluJb SINE Alu 0 302 1 478 340 66 19 chr17 53260286 53260557 -36243996 + HAL1 LINE L1 1460 1743 -764 1945 159 0 14 chr17 53260641 53260936 -36243617 + AluJo SINE Alu 1 291 -21 207 0 0 0 chr17 53261020 53261043 -36243510 + (TA)n Simple_repeat Simple_repeat 2 24 0 2233 183 127 15 chr17 53261060 53261540 -36243013 - MLT2B3 LTR ERVL -20 534 1 408 321 62 52 chr17 53261702 53262007 -36242546 + L1MEd LINE L1 2015 2322 -4074 250 292 31 0 chr17 53262013 53262143 -36242410 + L1MEd LINE L1 2327 2460 -3755 1241 124 0 0 chr17 53262256 53262425 -36242128 + AluSg/x SINE Alu 135 303 -7 2418 109 0 3 chr17 53262963 53263276 -36241277 + AluSx SINE Alu 1 312 0 2068 133 27 0 chr17 53263989 53264282 -36240271 - AluSx SINE Alu -11 301 1 1877 160 3 16 chr17 53264287 53264593 -36239960 - AluJb SINE Alu -1 311 10 492 218 8 25 chr17 53264737 53265106 -36239447 + CT-rich Low_complexity Low_complexity 1 362 0 202 231 0 26 chr17 53265120 53265198 -36239355 + CT-rich Low_complexity Low_complexity 2 77 0 367 245 10 41 chr17 53265465 53265563 -36238990 - MER5B DNA MER1_type -63 115 21 211 111 22 22 chr17 53265825 53265870 -36238683 + G-rich Low_complexity Low_complexity 5 49 0 1978 151 3 7 chr17 53266178 53266477 -36238076 + AluJb SINE Alu 6 303 -9 418 248 3 155 chr17 53266761 53266949 -36237604 - MLT1J LTR MaLR -254 257 131 1136 160 0 66 chr17 53266949 53267097 -36237456 - L1PB4 LINE L1 -1 6155 6028 2359 113 0 0 chr17 53267097 53267398 -36237155 - AluSx SINE Alu -11 301 1 1136 160 0 66 chr17 53267398 53267493 -36237060 - L1PB4 LINE L1 -128 6028 5928 418 248 3 155 chr17 53267493 53267607 -36236946 - MLT1J LTR MaLR -380 131 1 201 271 34 0 chr17 53268603 53268662 -36235891 + CT-rich Low_complexity Low_complexity 1 61 0 3307 108 14 10 chr17 53270133 53270642 -36233911 - MER9 LTR ERVK 0 511 1 30530 88 7 2 chr17 53270643 53275142 -36229411 - HERVK9 LTR ERVK -1 8032 1490 3546 108 11 22 chr17 53275142 53275690 -36228863 - HERVK9 LTR ERVK -5374 542 1 2992 106 55 10 chr17 53275690 53276179 -36228374 - MER9 LTR ERVK 0 511 1 627 206 8 0 chr17 53276342 53276473 -36228080 - MER103 DNA DNA -10 156 25 782 154 0 22 chr17 53276600 53276736 -36227817 + FLAM_C SINE Alu 1 133 0 1316 233 127 33 chr17 53276842 53277203 -36227350 + Zaphod DNA AcHobo 5 399 -3632 2088 130 3 16 chr17 53277203 53277510 -36227043 + AluSx SINE Alu 2 304 -8 884 115 0 83 chr17 53277515 53277671 -36226882 + FLAM_C SINE Alu 1 143 0 231 271 86 0 chr17 53277739 53277809 -36226744 - MER5C DNA MER1_type -248 76 1 655 205 132 42 chr17 53277818 53278008 -36226545 - MER58C DNA MER1_type -1 214 8 596 169 0 7 chr17 53278019 53278155 -36226398 + Zaphod DNA AcHobo 3599 3733 -298 2098 155 0 0 chr17 53278160 53278463 -36226090 - AluSx SINE Alu -9 303 1 1432 119 5 0 chr17 53278517 53278730 -36225823 - AluSp SINE Alu 0 313 105 2058 123 17 3 chr17 53280271 53280564 -36223989 + AluSq SINE Alu 1 297 -16 2281 115 0 0 chr17 53280568 53280863 -36223690 + AluSq SINE Alu 3 297 -16 542 267 37 73 chr17 53280864 53281113 -36223440 + MIR SINE MIR 19 261 -1 226 300 29 0 chr17 53282354 53282424 -36222129 - L3b LINE CR1 -202 1381 1310 563 254 31 28 chr17 53283906 53284058 -36220495 - MIR SINE MIR -36 172 22 2126 98 4 7 chr17 53284058 53284333 -36220220 - AluSp SINE Alu -39 274 1 1930 114 14 44 chr17 53284337 53284634 -36219919 - AluJo SINE Alu -16 296 9 563 254 31 28 chr17 53284634 53284688 -36219865 - MIR SINE MIR -188 20 3 505 301 62 10 chr17 53284968 53285161 -36219392 - MIR SINE MIR -48 214 12 197 338 38 12 chr17 53285388 53285468 -36219085 + MIR SINE MIR 32 113 -95 212 267 33 0 chr17 53286224 53286284 -36218269 + MIR3 SINE MIR 99 160 -48 2449 86 0 3 chr17 53286815 53287118 -36217435 + AluSp SINE Alu 1 302 -11 218 218 0 73 chr17 53287179 53287234 -36217319 + L2 LINE L2 3208 3258 -14 627 266 107 55 chr17 53287270 53287784 -36216769 - L2 LINE L2 -17 3296 2740 2194 136 0 0 chr17 53287883 53288185 -36216368 - AluSx SINE Alu -9 303 2 2402 87 3 26 chr17 53288210 53288522 -36216031 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr17 53289980 53290001 -36214552 + GC_rich Low_complexity Low_complexity 1 21 0 2241 91 0 42 chr17 53290997 53291305 -36213248 - AluSq SINE Alu -18 295 1 382 244 49 102 chr17 53292869 53292951 -36211602 - MIR SINE MIR -6 256 171 2371 56 3 0 chr17 53292951 53293282 -36211271 + AluSp SINE Alu 1 332 0 382 244 49 102 chr17 53293282 53293295 -36211258 - MIR SINE MIR -91 171 159 2006 110 57 0 chr17 53293295 53293577 -36210976 + AluSx SINE Alu 1 298 -14 2619 49 0 3 chr17 53293577 53293882 -36210671 + AluY SINE Alu 1 304 -7 382 244 49 102 chr17 53293882 53293988 -36210565 - MIR SINE MIR -101 161 63 181 108 0 81 chr17 53294019 53294056 -36210497 - L2 LINE L2 -20 3252 3219 2026 94 4 15 chr17 53294107 53294374 -36210179 - AluSx SINE Alu -15 297 34 186 171 0 0 chr17 53297396 53297437 -36207116 + GA-rich Low_complexity Low_complexity 1 41 0 289 259 52 35 chr17 53299312 53299428 -36205125 - MIR SINE MIR -124 138 21 745 56 19 0 chr17 53300613 53300720 -36203833 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 1625 173 14 25 chr17 53300764 53300897 -36203656 + AluJb SINE Alu 1 134 -178 2707 43 7 0 chr17 53300897 53301199 -36203354 + AluY SINE Alu 1 304 -7 1625 173 14 25 chr17 53301199 53301348 -36203205 + AluJb SINE Alu 134 280 -32 261 0 0 0 chr17 53301352 53301381 -36203172 + (CA)n Simple_repeat Simple_repeat 2 30 0 241 227 102 23 chr17 53302196 53302284 -36202269 - MIR SINE MIR -127 135 41 200 268 0 72 chr17 53303854 53303951 -36200602 - L2 LINE L2 -12 3301 3212 1707 144 0 8 chr17 53304017 53304298 -36200255 + AluJo SINE Alu 34 312 0 346 243 86 59 chr17 53304335 53304487 -36200066 + L2 LINE L2 3111 3266 -6 2308 96 10 25 chr17 53304487 53304801 -36199752 + AluSx SINE Alu 1 309 -3 2136 122 0 26 chr17 53304911 53305223 -36199330 - AluSx SINE Alu -8 304 1 2141 98 56 3 chr17 53305245 53305532 -36199021 - AluSp SINE Alu -9 304 3 271 182 91 15 chr17 53305533 53305599 -36198954 - MIR SINE MIR -62 146 82 2342 105 0 10 chr17 53305841 53306145 -36198408 + AluSg SINE Alu 1 301 -9 2568 158 71 97 chr17 53306415 53307161 -36197392 - LTR8A LTR ERV1 0 727 1 2652 36 0 3 chr17 53307491 53307793 -36196760 - AluY SINE Alu -10 301 1 544 205 0 26 chr17 53307855 53307972 -36196581 + L1PA16 LINE L1 5997 6110 -56 375 154 0 15 chr17 53307972 53308073 -36196480 - AluSc SINE Alu 0 314 215 270 180 0 0 chr17 53308077 53308127 -36196426 + L1PA16 LINE L1 6116 6165 -1 549 238 71 6 chr17 53308474 53308642 -36195911 - MIR SINE MIR -69 193 15 2075 133 13 0 chr17 53308878 53309055 -36195498 - AluSx SINE Alu -8 304 120 405 0 0 0 chr17 53309055 53309100 -36195453 + (TA)n Simple_repeat Simple_repeat 1 45 0 2075 133 13 0 chr17 53309100 53309222 -36195331 - AluSx SINE Alu -192 120 1 2313 107 3 3 chr17 53309922 53310230 -36194323 - AluSq SINE Alu -5 308 1 207 224 164 97 chr17 53310335 53310426 -36194127 - L2 LINE L2 -2 3311 3207 1705 154 50 27 chr17 53310426 53310725 -36193828 - AluJo SINE Alu -6 306 1 207 224 164 97 chr17 53310725 53310767 -36193786 - L2 LINE L2 -106 3207 3169 2466 87 0 0 chr17 53310865 53311163 -36193390 - AluSx SINE Alu -12 300 3 213 296 232 0 chr17 53311477 53311602 -36192951 - L3b LINE CR1 -184 1399 1246 404 305 120 46 chr17 53311676 53311749 -36192804 + L2 LINE L2 2823 2889 -383 2376 106 0 0 chr17 53311749 53312052 -36192501 - AluSx SINE Alu -9 303 1 404 305 120 46 chr17 53312052 53312394 -36192159 + L2 LINE L2 2889 3269 -3 2043 127 0 38 chr17 53312701 53312872 -36191681 - AluSx SINE Alu -8 304 149 387 0 0 0 chr17 53312872 53312915 -36191638 + (TA)n Simple_repeat Simple_repeat 1 43 0 2043 127 0 38 chr17 53312915 53313057 -36191496 - AluSx SINE Alu -163 149 3 337 301 0 10 chr17 53313106 53313209 -36191344 - MIR SINE MIR -108 154 53 252 0 0 0 chr17 53313303 53313331 -36191222 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 231 61 0 0 chr17 53313441 53313474 -36191079 + (TA)n Simple_repeat Simple_repeat 1 33 0 444 83 0 0 chr17 53313474 53313534 -36191019 - AluSq/x SINE Alu -189 123 64 32 67 0 0 chr17 53313535 53313595 -36190958 + AT_rich Low_complexity Low_complexity 1 60 0 309 277 85 45 chr17 53313595 53313699 -36190854 - L1M2 LINE L1 -4772 2077 1962 2004 109 7 24 chr17 53313699 53313992 -36190561 - AluSg SINE Alu -22 288 1 309 277 85 45 chr17 53313992 53314064 -36190489 - L1M2 LINE L1 -4887 1962 1894 297 75 0 0 chr17 53314358 53314398 -36190155 + (CA)n Simple_repeat Simple_repeat 2 41 0 4673 88 0 16 chr17 53314448 53315093 -36189460 - LTR8 LTR ERV1 0 691 57 418 51 5 14 chr17 53315094 53315308 -36189245 + AluSp SINE Alu 1 305 -8 344 180 0 0 chr17 53315308 53315369 -36189184 - LTR8 LTR ERV1 -623 68 8 189 0 0 0 chr17 53315436 53315457 -36189096 + (TA)n Simple_repeat Simple_repeat 1 21 0 2019 126 10 23 chr17 53315457 53315758 -36188795 - AluSx SINE Alu -15 297 1 1897 162 7 7 chr17 53315898 53316200 -36188353 - AluSx SINE Alu -8 304 3 2137 118 3 3 chr17 53316226 53316515 -36188038 - AluSq SINE Alu -24 289 1 180 206 16 79 chr17 53316708 53316728 -36187825 - L2 LINE L2 0 3313 3293 2353 92 0 7 chr17 53316728 53317050 -36187503 - AluSx SINE Alu 0 312 2 180 206 16 79 chr17 53317050 53317092 -36187461 - L2 LINE L2 -20 3293 3255 888 190 174 137 chr17 53317095 53317612 -36186941 + MLT1F LTR MaLR 1 536 -6 679 165 0 95 chr17 53317612 53317770 -36186783 + AluJo SINE Alu 1 143 -169 1983 106 110 0 chr17 53317771 53318053 -36186500 + AluSq SINE Alu 1 313 0 2264 86 34 3 chr17 53318156 53318447 -36186106 + AluSp SINE Alu 1 300 -13 2078 119 10 45 chr17 53318452 53318764 -36185789 + AluSg SINE Alu 1 301 -9 1091 176 4 63 chr17 53318849 53319088 -36185465 - AluJb SINE Alu -3 309 85 695 96 0 0 chr17 53319088 53319182 -36185371 - AluSc SINE Alu -61 248 155 2419 102 3 0 chr17 53319657 53319961 -36184592 + AluSx SINE Alu 1 305 -7 2164 123 27 0 chr17 53319971 53320271 -36184282 + AluSx SINE Alu 1 308 -4 326 294 120 65 chr17 53320355 53320802 -36183751 - L2 LINE L2 -3 3269 2709 2205 120 0 16 chr17 53320805 53321121 -36183432 - AluSx SINE Alu -1 311 1 1435 181 19 8 chr17 53321125 53321384 -36183169 - AluJo SINE Alu -10 302 41 683 278 61 5 chr17 53322352 53322550 -36182003 - MIR SINE MIR -32 230 22 236 278 30 75 chr17 53322573 53322706 -36181847 + MIR SINE MIR 103 229 -33 223 220 40 0 chr17 53322725 53322775 -36181778 + MIR SINE MIR 99 150 -112 1860 128 57 3 chr17 53322776 53323058 -36181495 + AluJo SINE Alu 1 297 -15 368 56 0 0 chr17 53323059 53323113 -36181440 + Alu SINE Alu 249 302 0 2166 109 24 3 chr17 53323179 53323472 -36181081 + AluSx SINE Alu 1 299 -13 2544 51 0 29 chr17 53323792 53324105 -36180448 - AluY SINE Alu -7 304 1 2239 93 0 0 chr17 53324267 53324584 -36179969 - AluSx SINE Alu 0 320 4 1148 252 131 24 chr17 53325185 53325598 -36178955 - L2 LINE L2 -4 3309 2853 2084 120 7 0 chr17 53325679 53325988 -36178565 + AluSq SINE Alu 1 311 0 1873 164 42 3 chr17 53326049 53326336 -36178217 + AluJo SINE Alu 1 298 -14 1836 177 0 3 chr17 53326584 53326884 -36177669 - AluJo SINE Alu -13 299 1 2240 104 16 23 chr17 53327049 53327356 -36177197 - AluSx SINE Alu -7 305 1 225 0 0 0 chr17 53327727 53327752 -36176801 + (TG)n Simple_repeat Simple_repeat 2 26 0 231 170 0 0 chr17 53327795 53327842 -36176711 + (CA)n Simple_repeat Simple_repeat 2 48 0 1860 94 0 0 chr17 53327952 53328187 -36176366 + AluSg SINE Alu 1 235 -75 278 241 141 41 chr17 53328375 53328545 -36176008 + L1MC4a LINE L1 5987 6173 -1635 2453 87 7 0 chr17 53328558 53328868 -36175685 + AluSx SINE Alu 1 312 0 1148 112 37 0 chr17 53328870 53329031 -36175522 + AluSg/x SINE Alu 132 298 -14 2400 83 6 22 chr17 53329110 53329424 -36175129 + AluSq SINE Alu 5 313 0 241 250 77 48 chr17 53329816 53329920 -36174633 + L2 LINE L2 3123 3229 -43 2494 90 0 0 chr17 53330338 53330638 -36173915 - AluSx SINE Alu -12 300 1 1748 150 24 17 chr17 53330638 53330931 -36173622 - AluJb SINE Alu -17 295 1 2101 131 0 13 chr17 53331117 53331422 -36173131 - AluSx SINE Alu -11 301 1 196 230 95 27 chr17 53331442 53331516 -36173037 - L2 LINE L2 -20 3293 3215 299 127 18 0 chr17 53331574 53331629 -36172924 - MIR SINE MIR -70 138 83 1996 145 16 0 chr17 53331659 53331962 -36172591 - AluSx SINE Alu -4 308 1 246 95 0 0 chr17 53332085 53332127 -36172426 + (T)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr17 53332642 53332663 -36171890 + GC_rich Low_complexity Low_complexity 1 21 0 27 92 0 0 chr17 53332698 53332774 -36171779 + GC_rich Low_complexity Low_complexity 1 76 0 275 246 25 66 chr17 53333165 53333287 -36171266 - MIR3 SINE MIR -1 207 91 240 35 0 0 chr17 53333380 53333409 -36171144 + (TG)n Simple_repeat Simple_repeat 1 29 0 3860 72 9 33 chr17 53333847 53334247 -36170306 - MER41A LTR ERV1 0 554 169 2261 100 21 0 chr17 53334247 53334536 -36170017 - AluSx SINE Alu -17 295 1 3860 72 9 33 chr17 53334536 53334677 -36169876 - MER41A LTR ERV1 -385 169 26 2006 59 0 8 chr17 53334680 53334919 -36169634 - AluY SINE Alu -74 237 1 231 299 0 0 chr17 53335050 53335117 -36169436 + MIR SINE MIR 60 126 -136 2395 111 0 0 chr17 53335336 53335643 -36168910 + AluSx SINE Alu 1 307 -5 2306 92 10 0 chr17 53336498 53336790 -36167763 + AluSp SINE Alu 3 297 -16 2354 113 3 0 chr17 53336792 53337102 -36167451 + AluSq SINE Alu 3 313 0 950 83 22 28 chr17 53337510 53337690 -36166863 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 201 143 0 29 chr17 53337691 53337726 -36166827 + (TC)n Simple_repeat Simple_repeat 1 34 0 2321 72 12 38 chr17 53337726 53338045 -36166508 - AluY SINE Alu 0 311 1 2500 97 0 0 chr17 53338046 53338354 -36166199 - AluSq SINE Alu -5 308 1 2175 116 10 23 chr17 53338359 53338662 -36165891 - AluSx SINE Alu -13 299 1 1984 97 24 88 chr17 53339259 53339590 -36164963 + AluSx SINE Alu 1 310 -2 2179 101 4 0 chr17 53339673 53339951 -36164602 + AluSx SINE Alu 1 279 -33 239 286 60 0 chr17 53340039 53340123 -36164430 + MIR SINE MIR 61 149 -59 2221 103 10 0 chr17 53341023 53341313 -36163240 + AluSp SINE Alu 1 293 -20 294 229 0 0 chr17 53342077 53342147 -36162406 - MLT1A1 LTR MaLR 0 365 296 2021 95 3 48 chr17 53342148 53342466 -36162087 + AluSc SINE Alu 1 305 0 2309 104 7 0 chr17 53342497 53342804 -36161749 - AluSg SINE Alu 0 310 2 639 206 56 134 chr17 53342804 53343000 -36161553 - MSTC LTR MaLR -63 365 155 2295 77 0 14 chr17 53343000 53343309 -36161244 - AluY SINE Alu 0 305 1 639 206 56 134 chr17 53343309 53343335 -36161218 - MSTC LTR MaLR -273 155 129 2305 86 16 13 chr17 53343335 53343639 -36160914 + AluY SINE Alu 1 305 -6 639 206 56 134 chr17 53343639 53343650 -36160903 - MSTC LTR MaLR -299 129 119 2131 141 3 0 chr17 53343650 53343948 -36160605 + AluSq SINE Alu 1 299 -14 2207 90 40 0 chr17 53343949 53344248 -36160305 + AluSp SINE Alu 1 311 -2 639 206 56 134 chr17 53344248 53344403 -36160150 - MSTC LTR MaLR -308 120 3 651 192 48 96 chr17 53344421 53344463 -36160090 - MLT2C1 LTR ERVL 0 397 355 270 0 0 0 chr17 53344463 53344493 -36160060 + (TG)n Simple_repeat Simple_repeat 2 31 0 651 192 48 96 chr17 53344493 53344507 -36160046 - MLT2C1 LTR ERVL -42 355 342 2079 98 38 3 chr17 53344507 53344794 -36159759 + AluSg SINE Alu 1 297 -13 651 192 48 96 chr17 53344794 53344944 -36159609 - MLT2C1 LTR ERVL -55 342 200 2148 114 10 0 chr17 53344958 53345248 -36159305 - AluSx SINE Alu -19 293 1 1115 81 0 0 chr17 53345248 53345384 -36159169 - AluSq/x SINE Alu -176 136 1 1104 90 0 0 chr17 53345395 53345539 -36159014 - AluSg/x SINE Alu -13 297 154 1744 50 0 0 chr17 53345545 53345744 -36158809 - AluY SINE Alu -112 199 1 2484 92 0 0 chr17 53345744 53346050 -36158503 - AluSg SINE Alu -3 307 2 727 188 99 17 chr17 53346055 53346236 -36158317 - MLT2C1 LTR ERVL -201 196 1 1936 304 48 42 chr17 53346245 53346698 -36157855 - HERVL LTR ERVL -1258 4396 3934 2071 100 50 7 chr17 53346698 53346978 -36157575 - AluSg SINE Alu -18 292 1 1936 304 48 42 chr17 53346978 53347382 -36157171 - HERVL LTR ERVL -1720 3934 3534 303 320 61 0 chr17 53347455 53347602 -36156951 - HERVL LTR ERVL -2216 3548 3393 1107 91 0 52 chr17 53347604 53347758 -36156795 - AluSq/x SINE Alu -166 146 1 716 268 44 118 chr17 53347758 53347981 -36156572 - HERVL LTR ERVL -2186 2810 2635 2191 88 10 24 chr17 53347981 53348277 -36156276 - AluSc SINE Alu -17 292 1 716 268 44 118 chr17 53348277 53348504 -36156049 - HERVL LTR ERVL -2361 2635 2393 2281 103 0 7 chr17 53348529 53348830 -36155723 + AluSx SINE Alu 1 299 -13 2279 109 0 26 chr17 53348831 53349143 -36155410 + AluSx SINE Alu 1 304 -8 434 328 33 22 chr17 53349176 53349356 -36155197 - HERVL LTR ERVL -3467 1529 1348 1216 159 4 40 chr17 53349494 53349720 -36154833 - AluSc SINE Alu -8 301 84 754 240 77 66 chr17 53349732 53349890 -36154663 - HERVL LTR ERVL -3865 1131 967 2379 70 3 7 chr17 53349890 53350188 -36154365 - AluSp SINE Alu -16 297 1 754 240 77 66 chr17 53350188 53350316 -36154237 - HERVL LTR ERVL -4029 967 842 2104 241 118 26 chr17 53350333 53351030 -36153523 - LTR41 LTR ERVL -12 761 1 850 285 75 48 chr17 53351030 53351366 -36153187 - HERVL LTR ERVL -4154 842 489 2585 71 0 3 chr17 53351366 53351676 -36152877 - AluSc SINE Alu 0 309 1 850 285 75 48 chr17 53351676 53351795 -36152758 - HERVL LTR ERVL -4507 489 375 632 161 36 0 chr17 53351795 53351907 -36152646 - MLT1E LTR MaLR 0 593 478 2201 121 14 0 chr17 53351913 53352210 -36152343 - AluSx SINE Alu -11 301 1 313 182 9 22 chr17 53352242 53352336 -36152217 - MLT1E1 LTR MaLR -503 151 18 1683 185 3 25 chr17 53352349 53352668 -36151885 - AluJo SINE Alu 0 312 1 451 191 38 179 chr17 53352704 53352966 -36151587 - MLT1E3-int LTR MaLR 0 1371 1147 491 149 9 37 chr17 53352980 53353132 -36151421 + FLAM_C SINE Alu 40 188 0 894 91 0 38 chr17 53353142 53353274 -36151279 + AluJo SINE Alu 1 127 -175 823 130 0 0 chr17 53353274 53353389 -36151164 + AluJo SINE Alu 186 300 -12 967 254 48 118 chr17 53353411 53353643 -36150910 - MLT1E3-int LTR MaLR -230 1141 894 2036 142 10 13 chr17 53353643 53353954 -36150599 - AluSq SINE Alu -3 310 1 967 254 48 118 chr17 53353954 53354011 -36150542 - MLT1E3-int LTR MaLR -477 894 835 2432 72 36 10 chr17 53354011 53354180 -36150373 - AluSp SINE Alu 0 313 131 2415 97 7 0 chr17 53354180 53354480 -36150073 - AluSg SINE Alu -8 302 1 2432 72 36 10 chr17 53354480 53354615 -36149938 - AluSp SINE Alu -182 131 1 967 254 48 118 chr17 53354615 53354800 -36149753 - MLT1E3-int LTR MaLR -536 835 699 2393 139 23 60 chr17 53354874 53354945 -36149608 + MLT1C LTR MaLR 4 467 0 2444 141 27 32 chr17 53354945 53355279 -36149274 + MLT1C LTR MaLR 59 392 -75 2209 126 3 7 chr17 53355279 53355588 -36148965 - AluSx SINE Alu -4 308 1 2444 141 27 32 chr17 53355588 53355664 -36148889 + MLT1C LTR MaLR 392 467 0 2011 205 61 72 chr17 53355768 53355834 -36148719 - MLT1E3-int LTR MaLR -768 603 538 584 175 0 0 chr17 53355834 53355931 -36148622 - AluJb SINE Alu -6 306 210 1933 162 0 16 chr17 53355838 53356141 -36148412 - AluJb SINE Alu -10 302 5 2011 205 61 72 chr17 53355931 53356168 -36148385 - MLT1E3-int LTR MaLR -833 538 300 195 100 0 0 chr17 53356168 53356198 -36148355 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2058 127 0 3 chr17 53356200 53356483 -36148070 - AluSx SINE Alu -30 282 1 2011 205 61 72 chr17 53356483 53356850 -36147703 - MLT1E3-int LTR MaLR -1072 299 159 2196 96 38 0 chr17 53356850 53357141 -36147412 - AluSx SINE Alu -10 302 1 2011 205 61 72 chr17 53357141 53357299 -36147254 - MLT1E3-int LTR MaLR -1212 159 1 340 143 18 0 chr17 53357303 53357359 -36147194 - MLT1E3 LTR MaLR -4 620 564 791 172 16 0 chr17 53357536 53357658 -36146895 + FLAM_C SINE Alu 3 126 -7 314 147 88 98 chr17 53357678 53357780 -36146773 - HERV16 LTR ERVL -4805 191 91 25 0 0 0 chr17 53357807 53357832 -36146721 + AT_rich Low_complexity Low_complexity 1 25 0 1591 80 35 0 chr17 53357838 53358038 -36146515 - AluSx SINE Alu -105 207 1 731 237 111 60 chr17 53358148 53358464 -36146089 - LTR16A LTR ERVL -104 346 15 1231 223 134 52 chr17 53358521 53358961 -36145592 - MLT1F1 LTR MaLR 0 567 92 1952 86 3 73 chr17 53358962 53359284 -36145269 + AluSx SINE Alu 1 301 0 1124 32 0 0 chr17 53359303 53359428 -36145125 + AluSp/q SINE Alu 173 297 -16 308 100 160 0 chr17 53359428 53359478 -36145075 - Tigger4(Zombi) DNA MER2_type -2673 58 1 577 204 146 101 chr17 53359573 53359703 -36144850 - MLT1H1 LTR MaLR -2 553 430 1826 132 70 0 chr17 53359703 53359976 -36144577 - AluSx SINE Alu -20 292 1 577 204 146 101 chr17 53359976 53360163 -36144390 - MLT1H1 LTR MaLR -125 430 216 408 172 107 95 chr17 53360147 53360166 -36144387 - MER112 DNA MER1_type -84 176 159 * 2430 81 7 3 chr17 53360166 53360473 -36144080 + AluSc SINE Alu 1 308 -1 408 172 107 95 chr17 53360473 53360622 -36143931 - MER112 DNA MER1_type -101 159 6 636 235 77 35 chr17 53360953 53361123 -36143430 + L2 LINE L2 3137 3313 0 270 0 0 0 chr17 53366044 53366074 -36138479 + (A)n Simple_repeat Simple_repeat 1 30 0 843 59 0 0 chr17 53367492 53367594 -36136959 - AluY SINE Alu -10 301 200 33 0 0 0 chr17 53367791 53367824 -36136729 + AT_rich Low_complexity Low_complexity 1 33 0 2403 92 0 0 chr17 53368050 53368354 -36136199 + AluSg SINE Alu 5 308 -2 32 0 0 0 chr17 53368864 53368896 -36135657 + AT_rich Low_complexity Low_complexity 1 32 0 1130 170 18 0 chr17 53368974 53369139 -36135414 + FAM SINE Alu 2 169 -6 249 274 28 9 chr17 53370900 53371006 -36133547 + G-rich Low_complexity Low_complexity 1 108 0 979 107 0 15 chr17 53371373 53371504 -36133049 - FLAM_C SINE Alu -4 129 1 2202 124 0 3 chr17 53371763 53372069 -36132484 - AluSx SINE Alu -7 305 1 1632 159 0 35 chr17 53372073 53372362 -36132191 - AluJo SINE Alu -21 291 13 246 261 185 0 chr17 53372581 53372646 -36131907 - MER20B DNA MER1_type -608 175 99 639 260 132 5 chr17 53373158 53373362 -36131191 - MIR SINE MIR -16 246 17 2222 102 0 14 chr17 53373691 53373986 -36130567 - AluSx SINE Alu -21 291 1 804 168 0 0 chr17 53374133 53374270 -36130283 + FLAM_C SINE Alu 1 137 -6 1695 181 0 7 chr17 53374358 53374646 -36129907 + AluJb SINE Alu 1 286 -26 2228 108 0 7 chr17 53374681 53374976 -36129577 - AluSc SINE Alu -16 293 1 2316 111 0 0 chr17 53375068 53375375 -36129178 + AluSx SINE Alu 1 307 -5 373 186 96 77 chr17 53375405 53375432 -36129121 + HAL1b LINE L1 1193 1218 -4903 837 136 8 23 chr17 53375432 53375564 -36128989 + FLAM_C SINE Alu 1 130 -3 373 186 96 77 chr17 53375564 53375636 -36128917 + HAL1b LINE L1 1218 1287 -4834 2115 137 3 0 chr17 53375636 53375928 -36128625 - AluSx SINE Alu -19 293 1 373 186 96 77 chr17 53375928 53375971 -36128582 + HAL1b LINE L1 1287 6110 -11 2267 98 0 38 chr17 53376273 53376588 -36127965 - AluY SINE Alu -8 303 1 279 188 50 38 chr17 53377204 53377284 -36127269 + LTR66 LTR ERVL 359 439 -171 195 129 0 0 chr17 53377284 53377315 -36127238 + (CA)n Simple_repeat Simple_repeat 2 32 0 292 282 157 55 chr17 53377317 53377572 -36126981 + L2 LINE L2 2233 2513 -801 857 129 0 0 chr17 53377736 53377860 -36126693 + AluSg/x SINE Alu 181 304 -5 261 153 68 51 chr17 53377974 53378033 -36126520 + MIR SINE MIR 202 261 -1 328 308 58 10 chr17 53378061 53378165 -36126388 + L2 LINE L2 3148 3256 -16 272 297 144 18 chr17 53378429 53378540 -36126013 - MIR SINE MIR -101 161 37 535 247 104 98 chr17 53378623 53378848 -36125705 + L1ME4a LINE L1 5296 5518 -603 818 142 63 16 chr17 53378848 53378975 -36125578 - FLAM_C SINE Alu 0 133 1 535 247 104 98 chr17 53378975 53379152 -36125401 + L1ME4a LINE L1 5518 5702 -419 2099 118 3 3 chr17 53379152 53379441 -36125112 - AluSx SINE Alu -23 289 1 535 247 104 98 chr17 53379441 53379517 -36125036 + L1ME4a LINE L1 5702 5776 -345 2250 96 13 16 chr17 53379536 53379848 -36124705 + AluSx SINE Alu 1 311 -1 2036 122 0 38 chr17 53379848 53380167 -36124386 + AluSg SINE Alu 1 307 -3 244 220 200 10 chr17 53380463 53380563 -36123990 + L1ME4a LINE L1 5984 6102 -19 1884 154 20 3 chr17 53380564 53380863 -36123690 - AluJb SINE Alu -6 306 3 2201 135 0 0 chr17 53380908 53381205 -36123348 + AluSx SINE Alu 1 297 -15 1892 136 3 58 chr17 53381598 53381928 -36122625 + AluSx SINE Alu 1 312 0 2532 54 0 0 chr17 53382347 53382641 -36121912 - AluY SINE Alu -17 294 1 2048 138 0 3 chr17 53383008 53383312 -36121241 + AluJb SINE Alu 1 303 -9 2382 105 0 0 chr17 53384548 53384854 -36119699 - AluSx SINE Alu -6 306 1 2174 104 0 10 chr17 53385547 53385845 -36118708 - AluSg SINE Alu -15 295 1 2538 67 3 3 chr17 53386079 53386417 -36118136 + AluSp SINE Alu 1 338 0 2302 101 0 0 chr17 53386560 53386848 -36117705 - AluSg SINE Alu -22 288 1 771 197 102 0 chr17 53387262 53387409 -36117144 - FRAM SINE Alu -4 162 1 2418 86 3 0 chr17 53387427 53387729 -36116824 - AluSp SINE Alu -10 303 1 25 0 0 28 chr17 53390458 53390481 -36114072 + AT_rich Low_complexity Low_complexity 1 24 -11 2113 113 3 0 chr17 53390481 53390764 -36113789 - AluSg SINE Alu -26 284 1 25 0 0 28 chr17 53390764 53390776 -36113777 + AT_rich Low_complexity Low_complexity 24 35 0 358 368 97 0 chr17 53390859 53390973 -36113580 + L2 LINE L2 3143 3267 -5 187 298 0 21 chr17 53391615 53391662 -36112891 - L2 LINE L2 -12 3260 3215 1211 152 13 67 chr17 53391716 53391741 -36112812 - AluJo SINE Alu -17 295 270 2314 100 0 13 chr17 53391741 53392050 -36112503 + AluSc SINE Alu 1 305 -4 1211 152 13 67 chr17 53392050 53392248 -36112305 - AluJo SINE Alu -42 270 84 338 233 227 38 chr17 53392257 53392574 -36111979 - HAL1 LINE L1 0 2507 2131 319 289 52 0 chr17 53392625 53392722 -36111831 - HAL1 LINE L1 -2372 135 34 380 326 8 23 chr17 53392750 53392903 -36111650 - MIR SINE MIR -48 160 10 341 183 17 0 chr17 53393186 53393246 -36111307 + MLT1I LTR MaLR 5 65 -344 994 131 20 0 chr17 53393249 53393402 -36111151 - AluSg/x SINE Alu -20 290 135 417 269 102 24 chr17 53393441 53393608 -36110945 + MLT1I LTR MaLR 83 262 -147 341 146 0 0 chr17 53393651 53393719 -36110834 - AluS SINE Alu 0 299 232 533 234 159 45 chr17 53444080 53444281 -36060272 - MIR SINE MIR -8 254 31 37 0 0 0 chr17 53444937 53444974 -36059579 + AT_rich Low_complexity Low_complexity 1 37 0 1107 138 0 0 chr17 53445113 53445303 -36059250 + AluSg/x SINE Alu 124 313 0 1629 123 70 4 chr17 53445303 53445547 -36059006 + AluSq SINE Alu 1 260 -53 21 0 0 0 chr17 53445558 53445579 -36058974 + AT_rich Low_complexity Low_complexity 1 21 0 480 202 0 11 chr17 53445957 53446046 -36058507 - FLAM_C SINE Alu -19 124 37 2505 67 0 0 chr17 53446190 53446490 -36058063 + AluY SINE Alu 1 300 -11 349 274 75 9 chr17 53446632 53446738 -36057815 - L2 LINE L2 -8 3305 3193 2059 143 0 0 chr17 53446903 53447197 -36057356 + AluSq SINE Alu 5 298 -15 1359 156 184 106 chr17 53447498 53447913 -36056640 + L1MC5 LINE L1 6695 7163 -798 1899 149 0 0 chr17 53447913 53448194 -36056359 + AluJb SINE Alu 1 281 -31 1359 156 184 106 chr17 53448194 53448323 -36056230 + L1MC5 LINE L1 7163 7281 -680 311 106 21 0 chr17 53448425 53448472 -36056081 - Alu SINE Alu -260 48 1 797 227 82 48 chr17 53448472 53448637 -36055916 + L1MC5 LINE L1 7310 7468 -493 1376 171 74 19 chr17 53448637 53448970 -36055583 + AluJb SINE Alu 1 348 0 797 227 82 48 chr17 53448970 53449133 -36055420 + L1MC5 LINE L1 7468 7650 -311 323 219 16 0 chr17 53449206 53449270 -36055283 - AluJ/FLAM SINE Alu -237 65 1 1684 147 111 0 chr17 53449574 53449853 -36054700 + AluSx SINE Alu 1 310 -2 796 209 57 24 chr17 53450461 53450672 -36053881 + L1MD3 LINE L1 7765 7982 -13 2134 86 4 0 chr17 53450684 53450951 -36053602 + AluSx SINE Alu 1 268 -44 2350 100 0 0 chr17 53451089 53451389 -36053164 - AluSq SINE Alu -13 300 1 1769 156 13 36 chr17 53451614 53451922 -36052631 - AluJb SINE Alu -11 301 1 1857 152 26 26 chr17 53452049 53452359 -36052194 - AluSx SINE Alu -2 310 1 1295 179 77 15 chr17 53452381 53452654 -36051899 - AluJb SINE Alu -17 295 6 2212 118 20 0 chr17 53452713 53453019 -36051534 - AluSx SINE Alu 0 312 1 914 154 0 0 chr17 53453024 53453160 -36051393 - AluSq/x SINE Alu -177 136 1 33 25 0 0 chr17 53456042 53456082 -36048471 + GC_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr17 53456094 53456116 -36048437 + GC_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr17 53456149 53456191 -36048362 + GC_rich Low_complexity Low_complexity 1 42 0 825 138 0 0 chr17 53456512 53456628 -36047925 + AluSg/x SINE Alu 166 281 -31 216 0 0 0 chr17 53456630 53456654 -36047899 + (TA)n Simple_repeat Simple_repeat 2 25 0 313 350 20 0 chr17 53456654 53456754 -36047799 - L1MC4 LINE L1 -1339 6703 6602 1736 134 7 43 chr17 53457371 53457676 -36046877 + AluJo SINE Alu 12 305 -7 447 295 26 13 chr17 53457962 53458118 -36046435 - MIR3 SINE MIR -9 199 42 1942 255 114 13 chr17 53458147 53458697 -36045856 + L1ME1 LINE L1 5472 6092 -74 180 0 0 0 chr17 53458697 53458717 -36045836 + (TGG)n Simple_repeat Simple_repeat 3 22 0 1942 255 114 13 chr17 53458717 53458781 -36045772 + L1ME1 LINE L1 6092 6148 -18 1383 188 46 7 chr17 53458845 53459127 -36045426 - AluJb SINE Alu -17 295 3 558 141 59 0 chr17 53459142 53459227 -36045326 - AluSg/x SINE Alu -18 292 203 454 171 77 77 chr17 53459298 53459468 -36045085 - MER112 DNA MER1_type -90 170 1 818 171 0 7 chr17 53460140 53460280 -36044273 + AluSg/x SINE Alu 153 291 -21 2127 101 0 13 chr17 53460518 53460824 -36043729 + AluSg SINE Alu 1 302 -8 21 0 0 0 chr17 53461366 53461387 -36043166 + AT_rich Low_complexity Low_complexity 1 21 0 2178 108 0 7 chr17 53461389 53461685 -36042868 + AluSg SINE Alu 1 294 -16 4281 151 37 50 chr17 53461855 53461907 -36042646 + L1MB7 LINE L1 5313 5364 -820 2263 88 0 35 chr17 53461907 53462226 -36042327 + AluY SINE Alu 1 308 -3 4281 151 37 50 chr17 53462226 53462678 -36041875 + L1MB7 LINE L1 5364 5821 -363 1789 172 0 10 chr17 53462678 53462975 -36041578 + AluJb SINE Alu 1 294 -18 1813 165 0 0 chr17 53462976 53463273 -36041280 + AluSx SINE Alu 1 297 -15 4281 151 37 50 chr17 53463273 53463619 -36040934 + L1MB7 LINE L1 5820 6167 -17 302 269 235 34 chr17 53463756 53463905 -36040648 + MIR3 SINE MIR 27 205 -3 2138 118 0 0 chr17 53464505 53464802 -36039751 - AluSg SINE Alu -13 297 1 1957 120 17 20 chr17 53464803 53465104 -36039449 - AluSx SINE Alu -12 300 1 1694 163 27 10 chr17 53465104 53465399 -36039154 - AluSg SINE Alu -10 300 1 198 0 0 0 chr17 53465422 53465444 -36039109 + (T)n Simple_repeat Simple_repeat 1 22 0 1602 190 10 13 chr17 53465537 53465847 -36038706 + AluJo SINE Alu 4 312 0 1562 149 35 28 chr17 53466473 53466761 -36037792 - AluJb SINE Alu -18 294 5 860 264 70 18 chr17 53466807 53467080 -36037473 + MLT1L LTR MaLR 321 607 -8 521 314 135 3 chr17 53467091 53467416 -36037137 - L2 LINE L2 -972 2342 1975 220 211 355 0 chr17 53467504 53467580 -36036973 + MIR SINE MIR 7 109 -153 836 70 0 9 chr17 53467677 53467791 -36036762 - AluSg SINE Alu -8 302 190 189 0 0 0 chr17 53467791 53467812 -36036741 + (T)n Simple_repeat Simple_repeat 1 21 0 1372 115 0 0 chr17 53468311 53468503 -36036050 - AluSg SINE Alu -110 200 9 14303 110 74 17 chr17 53469144 53469306 -36035247 - Tigger1 DNA MER2_type 0 2418 2267 2094 81 0 0 chr17 53469306 53469579 -36034974 + AluY SINE Alu 27 299 -12 14303 110 74 17 chr17 53469579 53471064 -36033489 - Tigger1 DNA MER2_type -151 2267 867 2146 109 7 0 chr17 53471064 53471366 -36033187 - AluSx SINE Alu -8 304 1 14303 110 74 17 chr17 53471366 53471411 -36033142 - Tigger1 DNA MER2_type -1551 867 826 2342 92 0 0 chr17 53471411 53471717 -36032836 - AluSq SINE Alu -7 306 1 14303 110 74 17 chr17 53471717 53472289 -36032264 - Tigger1 DNA MER2_type -1592 826 24 821 180 6 30 chr17 53472297 53472464 -36032089 + AluSg/x SINE Alu 84 246 -64 217 212 0 30 chr17 53472467 53472517 -36032036 + T-rich Low_complexity Low_complexity 5 54 -14 305 213 16 0 chr17 53472517 53472578 -36031975 - U7 snRNA snRNA -1 62 1 217 212 0 30 chr17 53472578 53472593 -36031960 + T-rich Low_complexity Low_complexity 54 68 0 908 110 47 0 chr17 53472807 53472934 -36031619 + FLAM_C SINE Alu 1 133 0 2127 101 3 0 chr17 53473839 53474136 -36030417 - AluSg SINE Alu -12 298 1 222 213 64 0 chr17 53474166 53474213 -36030340 - L2 LINE L2 -15 3298 3249 610 185 0 9 chr17 53474275 53474383 -36030170 + FLAM_C SINE Alu 3 109 -34 246 216 0 39 chr17 53474484 53474535 -36030018 + Alu SINE Alu 75 119 -183 456 35 0 0 chr17 53474540 53474598 -36029955 + (TA)n Simple_repeat Simple_repeat 2 59 0 837 146 0 0 chr17 53474602 53474732 -36029821 - AluSq/x SINE Alu -180 133 4 722 237 114 22 chr17 53474754 53474982 -36029571 + MIR SINE MIR 1 249 -13 2511 148 31 14 chr17 53475225 53475644 -36028909 + MSTB LTR MaLR 1 426 0 1637 196 3 0 chr17 53478274 53478585 -36025968 - AluJb SINE Alu 0 312 1 2327 115 7 110 chr17 53478629 53478790 -36025763 + MSTD LTR MaLR 1 177 -219 2110 109 3 7 chr17 53478790 53479092 -36025461 + AluSx SINE Alu 1 301 -11 2327 115 7 110 chr17 53479092 53479365 -36025188 + MSTD LTR MaLR 177 390 -6 2333 91 0 3 chr17 53479983 53480292 -36024261 - AluSx SINE Alu -2 310 3 395 304 61 33 chr17 53480294 53480475 -36024078 - MIR SINE MIR -57 205 20 204 241 19 0 chr17 53480582 53480636 -36023917 + CT-rich Low_complexity Low_complexity 1 55 0 1746 165 0 19 chr17 53481016 53481356 -36023197 - AluJo SINE Alu 0 312 1 2150 82 4 0 chr17 53481362 53481679 -36022874 - AluSp SINE Alu 0 318 1 21 36 0 0 chr17 53481688 53481716 -36022837 + AT_rich Low_complexity Low_complexity 1 28 0 2007 117 17 7 chr17 53482066 53482365 -36022188 + AluSx SINE Alu 1 302 -10 2084 122 0 0 chr17 53482787 53483069 -36021484 + AluSx SINE Alu 1 285 -27 519 60 0 0 chr17 53483069 53483136 -36021417 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 2084 122 0 0 chr17 53483136 53483149 -36021404 + AluSx SINE Alu 284 296 -16 1173 101 22 17 chr17 53483151 53483378 -36021175 + AluSq SINE Alu 106 333 0 1997 123 7 0 chr17 53483668 53483976 -36020577 + AluY SINE Alu 1 310 -1 1679 144 14 7 chr17 53484139 53484417 -36020136 - AluJo SINE Alu -4 308 29 1206 156 199 19 chr17 53484437 53484693 -36019860 - AluJb SINE Alu 0 302 1 191 61 30 0 chr17 53484704 53484737 -36019816 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1853 130 0 77 chr17 53485252 53485590 -36018963 + AluSq SINE Alu 2 313 0 2082 124 7 3 chr17 53487150 53487457 -36017096 + AluSx SINE Alu 1 308 -4 1624 149 3 110 chr17 53487933 53488135 -36016418 - AluJb SINE Alu -1 301 148 1542 125 4 17 chr17 53488135 53488375 -36016178 - AluSx SINE Alu -15 297 61 1624 149 3 110 chr17 53488375 53488507 -36016046 - AluJb SINE Alu -154 148 3 180 0 0 0 chr17 53488523 53488543 -36016010 + (CAA)n Simple_repeat Simple_repeat 2 21 0 243 194 30 60 chr17 53488960 53489027 -36015526 - MER46A DNA MER2_type -73 163 99 * 466 79 16 0 chr17 53488999 53489062 -36015491 + MER46A DNA MER2_type 172 235 -1 445 165 19 58 chr17 53489062 53489132 -36015421 + MER53 DNA DNA 123 188 -1 2109 189 66 0 chr17 53489136 53489313 -36015240 + MSTB LTR MaLR 1 165 -261 195 42 0 0 chr17 53489313 53489337 -36015216 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 2109 189 66 0 chr17 53489337 53489555 -36014998 + MSTB LTR MaLR 165 422 -4 1654 153 0 85 chr17 53489556 53489897 -36014656 + AluJb SINE Alu 1 312 0 2064 110 13 7 chr17 53489908 53490218 -36014335 + AluSx SINE Alu 1 312 0 1491 165 14 35 chr17 53490654 53490939 -36013614 + AluJo SINE Alu 3 281 -31 1938 112 28 0 chr17 53490939 53491224 -36013329 - AluSq SINE Alu -5 308 15 1651 157 70 0 chr17 53491225 53491512 -36013041 + MLT1D LTR MaLR 12 318 -187 498 179 15 20 chr17 53491480 53491624 -36012929 + MLT1D LTR MaLR 213 502 -3 * 602 300 47 53 chr17 53491769 53492109 -36012444 + L2 LINE L2 2898 3235 -37 1731 127 82 0 chr17 53492337 53492605 -36011948 - AluSx SINE Alu -22 290 1 394 100 14 14 chr17 53492619 53492689 -36011864 + (TTCCC)n Simple_repeat Simple_repeat 1 70 0 700 168 67 0 chr17 53492689 53492808 -36011745 - FLAM_C SINE Alu -6 127 1 370 250 0 0 chr17 53492888 53492960 -36011593 + L2 LINE L2 3160 3231 -41 1661 144 0 56 chr17 53493017 53493322 -36011231 - AluJb SINE Alu -22 290 3 186 224 0 0 chr17 53494070 53494119 -36010434 + GA-rich Low_complexity Low_complexity 4 52 0 2124 115 0 0 chr17 53494183 53494487 -36010066 + AluSx SINE Alu 1 304 -8 270 318 27 0 chr17 53494907 53495017 -36009536 + L3b LINE CR1 1296 1408 -175 1913 122 0 14 chr17 53495558 53495870 -36008683 - AluSx SINE Alu 0 308 1 539 243 44 44 chr17 53495895 53496031 -36008522 + L2 LINE L2 3136 3271 -1 1676 170 3 26 chr17 53496426 53496738 -36007815 + AluJb SINE Alu 3 307 -5 234 327 100 9 chr17 53496929 53497039 -36007514 + L2 LINE L2 3134 3253 -19 246 340 122 45 chr17 53498707 53499084 -36005469 + L2 LINE L2 2848 3253 -19 23 0 0 0 chr17 53499152 53499175 -36005378 + AT_rich Low_complexity Low_complexity 1 23 0 1758 158 11 0 chr17 53499175 53499454 -36005099 + AluJb SINE Alu 1 282 -30 29 0 0 0 chr17 53499762 53499791 -36004762 + AT_rich Low_complexity Low_complexity 1 29 0 236 200 0 0 chr17 53500308 53500358 -36004195 - Charlie7 DNA MER1_type -48 2564 2515 1386 234 58 60 chr17 53500363 53500482 -36004071 - Charlie7 DNA MER1_type -1923 689 571 1533 129 0 8 chr17 53500482 53500730 -36003823 + L1MA4 LINE L1 6054 6299 -1 1386 234 58 60 chr17 53500730 53501111 -36003442 - Charlie7 DNA MER1_type -2041 571 190 1702 137 4 0 chr17 53501281 53501543 -36003010 + AluJb SINE Alu 1 263 -49 2114 115 0 0 chr17 53501789 53502084 -36002469 - AluSx SINE Alu -17 295 1 729 281 44 0 chr17 53502668 53502896 -36001657 - MIR SINE MIR -21 241 4 778 144 15 8 chr17 53503758 53503890 -36000663 + FLAM_C SINE Alu 1 133 0 413 157 14 0 chr17 53503900 53503970 -36000583 + AluJ/FRAM SINE Alu 231 301 -11 2283 103 3 0 chr17 53504461 53504771 -35999782 + AluSx SINE Alu 1 311 -1 286 291 43 35 chr17 53506121 53506262 -35998291 + L1MC4a LINE L1 5785 5926 -1882 1535 138 0 4 chr17 53506523 53506754 -35997799 - AluJo SINE Alu -1 311 82 2270 110 0 17 chr17 53506759 53506922 -35997631 - AluSx SINE Alu -16 296 139 2277 107 0 7 chr17 53506922 53507230 -35997323 - AluSc SINE Alu -3 306 1 2270 110 0 17 chr17 53507230 53507367 -35997186 - AluSx SINE Alu -173 139 1 2095 147 0 3 chr17 53507379 53507685 -35996868 - AluSx SINE Alu -6 306 2 303 140 0 0 chr17 53507697 53507747 -35996806 + (T)n Simple_repeat Simple_repeat 1 50 0 799 61 9 0 chr17 53507747 53507862 -35996691 - LTR9B LTR ERV1 -87 557 442 297 51 0 0 chr17 53507871 53507910 -35996643 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 400 62 0 0 chr17 53507914 53507962 -35996591 - Alu SINE Alu -260 49 2 2340 72 28 3 chr17 53507975 53508266 -35996287 - AluSq SINE Alu -15 298 1 2587 162 16 16 chr17 53508479 53508929 -35995624 + MER66A LTR ERV1 1 450 -28 297 250 38 38 chr17 53509187 53509267 -35995286 + L2 LINE L2 3234 3313 0 2384 78 17 0 chr17 53509460 53509755 -35994798 - AluSx SINE Alu -12 300 1 926 123 0 29 chr17 53510282 53510420 -35994133 - AluSq/x SINE Alu -178 134 1 2321 108 10 0 chr17 53510439 53510746 -35993807 - AluSx SINE Alu -1 311 2 417 297 30 30 chr17 53510822 53510987 -35993566 - MIR SINE MIR -50 212 48 1783 163 11 0 chr17 53510987 53511299 -35993254 - AluJb SINE Alu 0 315 1 1555 193 40 30 chr17 53511299 53511599 -35992954 - AluJo SINE Alu -9 303 1 2395 93 0 3 chr17 53511746 53512046 -35992507 - AluSq SINE Alu -14 299 1 313 349 114 12 chr17 53512220 53512386 -35992167 + MIR3 SINE MIR 4 186 -22 1830 125 66 35 chr17 53513130 53513418 -35991135 - AluSx SINE Alu -15 297 1 819 183 88 95 chr17 53513418 53513613 -35990940 - MER58B DNA MER1_type -2080 340 145 818 152 23 15 chr17 53513613 53513745 -35990808 - FLAM_C SINE Alu 0 133 1 1654 160 3 85 chr17 53513749 53513908 -35990645 - AluJo SINE Alu -19 293 171 2480 76 7 0 chr17 53513908 53514209 -35990344 - AluY SINE Alu -8 303 1 1654 160 3 85 chr17 53514209 53514368 -35990185 - AluJo SINE Alu -141 171 1 819 183 88 95 chr17 53514368 53514548 -35990005 - MER58B DNA MER1_type -2278 142 1 224 317 19 29 chr17 53514977 53515081 -35989472 - L2 LINE L2 -217 3055 2953 225 0 0 0 chr17 53515307 53515332 -35989221 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2060 115 0 40 chr17 53515799 53516103 -35988450 - AluSx SINE Alu -20 292 1 2396 206 93 46 chr17 53516105 53516347 -35988206 + L1M4 LINE L1 4099 4328 -1818 2203 113 7 13 chr17 53516347 53516649 -35987904 - AluSx SINE Alu -12 300 1 2341 68 0 0 chr17 53516656 53516973 -35987580 - AluY SINE Alu 0 317 1 2396 206 93 46 chr17 53516973 53517504 -35987049 + L1M4 LINE L1 4333 4918 -1228 350 78 0 0 chr17 53517505 53517556 -35986997 + AluJ SINE Alu 85 135 -167 2087 129 4 0 chr17 53517556 53517835 -35986718 + AluSx SINE Alu 1 280 -32 240 35 0 0 chr17 53517835 53517864 -35986689 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2186 124 13 3 chr17 53519552 53519906 -35984647 + AluJb SINE Alu 1 357 0 878 150 0 0 chr17 53521883 53522016 -35982537 + AluJ SINE Alu 137 269 -43 297 0 0 0 chr17 53522020 53522053 -35982500 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 363 240 23 93 chr17 53522293 53522422 -35982131 - L2 LINE L2 -1 3312 3193 2293 109 20 0 chr17 53525787 53526090 -35978463 - AluSq SINE Alu -4 309 1 1796 169 10 17 chr17 53526135 53526436 -35978117 - AluJb SINE Alu -12 300 2 704 177 73 0 chr17 53526439 53526563 -35977990 - FLAM_A SINE Alu 0 133 1 238 325 75 66 chr17 53526916 53527128 -35977425 + MIR SINE MIR 35 248 -14 2335 101 10 0 chr17 53527454 53527752 -35976801 - AluSx SINE Alu -11 301 1 202 302 93 23 chr17 53528826 53528912 -35975641 - MIR3 SINE MIR -15 193 102 2079 148 3 3 chr17 53529753 53530063 -35974490 - AluJb SINE Alu -2 310 1 430 241 163 14 chr17 53530341 53530482 -35974071 - MIR SINE MIR -68 194 33 265 360 0 0 chr17 53531670 53531756 -35972797 - MIR SINE MIR -81 127 42 373 206 0 11 chr17 53531786 53531878 -35972675 - L1MC4 LINE L1 -30 8012 7922 2416 65 10 7 chr17 53531957 53532267 -35972286 - AluSp SINE Alu -2 311 1 375 175 0 0 chr17 53532268 53532331 -35972222 - L1MA4A LINE L1 -331 5972 5910 2013 149 7 10 chr17 53532333 53532641 -35971912 + AluJb SINE Alu 1 307 -5 7250 165 33 28 chr17 53532641 53533001 -35971552 - L1 LINE L1 -1585 5623 5266 726 86 57 0 chr17 53533001 53533106 -35971447 - HY1 scRNA scRNA -1 111 1 7250 165 33 28 chr17 53533106 53533207 -35971346 - L1 LINE L1 -1942 5266 5167 2198 88 7 11 chr17 53533207 53533521 -35971032 + AluSp SINE Alu 1 313 0 7250 165 33 28 chr17 53533521 53534673 -35969880 - L1 LINE L1 -2041 5167 3996 2415 103 3 0 chr17 53534673 53534983 -35969570 - AluSp SINE Alu -2 311 1 7250 165 33 28 chr17 53534983 53535025 -35969528 - L1 LINE L1 -3212 3996 3956 8095 77 12 187 chr17 53535067 53536742 -35967811 - SVA Other Other 0 1386 4 288 70 0 0 chr17 53536745 53536788 -35967765 + (CAAG)n Simple_repeat Simple_repeat 2 44 0 318 176 0 27 chr17 53536788 53536855 -35967698 - L1 LINE L1 -3214 3994 3928 2012 138 17 0 chr17 53536855 53537146 -35967407 + AluSx SINE Alu 1 296 -16 2370 107 3 0 chr17 53537172 53537481 -35967072 + AluSp SINE Alu 1 310 -3 3082 163 28 29 chr17 53537764 53538099 -35966454 - L1 LINE L1 -3267 3941 3607 1967 142 3 3 chr17 53538099 53538402 -35966151 - AluJb SINE Alu 0 303 1 3082 163 28 29 chr17 53538402 53538730 -35965823 - L1 LINE L1 -3601 3607 3280 2346 93 3 0 chr17 53538730 53539030 -35965523 + AluSx SINE Alu 1 301 -11 3082 163 28 29 chr17 53539030 53539603 -35964950 - L1 LINE L1 -3928 3280 2702 1264 216 0 0 chr17 53539614 53539827 -35964726 - AluJo SINE Alu -27 285 73 258 32 0 0 chr17 53540610 53540641 -35963912 + (A)n Simple_repeat Simple_repeat 1 31 0 496 224 0 0 chr17 53541480 53541565 -35962988 - AluJo SINE Alu -226 86 2 1479 125 84 13 chr17 53541568 53541879 -35962674 - L1 LINE L1 -4500 2709 2377 3135 113 8 24 chr17 53541889 53542042 -35962511 + L1 LINE L1 4256 4410 -1736 2048 148 3 0 chr17 53542042 53542340 -35962213 - AluJb SINE Alu -13 299 1 3135 113 8 24 chr17 53542340 53542719 -35961834 + L1 LINE L1 4410 4779 -1367 275 171 11 0 chr17 53542710 53542778 -35961775 - L1 LINE L1 -5825 1384 1136 * 961 250 144 10 chr17 53542794 53542933 -35961620 - Charlie1b DNA MER1_type -2247 514 395 1754 164 36 13 chr17 53542933 53543237 -35961316 + AluJb SINE Alu 1 311 -1 961 250 144 10 chr17 53543237 53543533 -35961020 - Charlie1b DNA MER1_type -2366 395 6 340 315 31 30 chr17 53543786 53544013 -35960540 - MLT1J LTR MaLR -240 271 5 388 250 58 42 chr17 53544013 53544133 -35960420 + HAL1 LINE L1 812 933 -1574 307 244 23 119 chr17 53544118 53544138 -35960415 + HAL1 LINE L1 882 902 -1605 * 2217 109 0 0 chr17 53544138 53544422 -35960131 + AluSg SINE Alu 1 284 -26 307 244 23 119 chr17 53544422 53544439 -35960114 + HAL1 LINE L1 902 919 -1588 347 0 0 23 chr17 53544439 53544483 -35960070 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 307 244 23 119 chr17 53544483 53544620 -35959933 + HAL1 LINE L1 919 1040 -1467 2411 207 91 54 chr17 53544622 53544684 -35959869 + L1ME2 LINE L1 4042 4100 -2046 2062 115 0 43 chr17 53544684 53544989 -35959564 - AluSx SINE Alu -20 292 1 2411 207 91 54 chr17 53544989 53545233 -35959320 + L1ME2 LINE L1 4100 4334 -1812 2203 113 7 13 chr17 53545233 53545535 -35959018 - AluSx SINE Alu -12 300 1 2341 68 0 0 chr17 53545542 53545859 -35958694 - AluY SINE Alu 0 317 1 2411 207 91 54 chr17 53545859 53546388 -35958165 + L1ME2 LINE L1 4339 4918 -1228 350 78 0 0 chr17 53546389 53546440 -35958113 + AluJb SINE Alu 85 135 -167 2266 97 10 19 chr17 53546440 53546750 -35957803 + AluSx SINE Alu 1 307 -5 2482 188 64 61 chr17 53546770 53547080 -35957473 + L1ME2 LINE L1 5128 5436 -728 2613 60 0 0 chr17 53547080 53547382 -35957171 + AluY SINE Alu 1 302 -9 2482 188 64 61 chr17 53547382 53547628 -35956925 + L1ME2 LINE L1 5436 5680 -484 1746 158 11 15 chr17 53547628 53547901 -35956652 - AluJo SINE Alu -40 272 1 2482 188 64 61 chr17 53547901 53548179 -35956374 + L1ME2 LINE L1 5680 5995 -169 1073 77 0 64 chr17 53548194 53548350 -35956203 - AluSq/x SINE Alu -161 151 6 264 327 40 68 chr17 53548422 53548673 -35955880 - L2 LINE L2 -2984 330 87 198 0 51 51 chr17 53549154 53549193 -35955360 + (TTA)n Simple_repeat Simple_repeat 2 40 0 373 239 0 0 chr17 53549228 53549299 -35955254 - L2 LINE L2 0 3313 3243 344 303 151 17 chr17 53549363 53549601 -35954952 + LTR33 LTR ERVL 55 324 -197 227 245 20 0 chr17 53549872 53549921 -35954632 + GA-rich Low_complexity Low_complexity 1 50 0 243 163 190 0 chr17 53550070 53550132 -35954421 + MIR SINE MIR 73 145 -63 849 164 0 8 chr17 53550178 53550312 -35954241 + FLAM_A SINE Alu 1 133 0 2630 65 0 0 chr17 53550315 53550624 -35953929 + AluY SINE Alu 1 309 -2 2266 105 0 20 chr17 53550797 53551103 -35953450 - AluSx SINE Alu -12 300 1 235 282 82 0 chr17 53551411 53551496 -35953057 - L2 LINE L2 -26 3246 3155 304 253 12 48 chr17 53552087 53552170 -35952383 + MIR3 SINE MIR 92 171 -37 716 320 173 21 chr17 53552435 53553303 -35951250 + L2 LINE L2 2274 3272 0 287 258 0 43 chr17 53553366 53553459 -35951094 - L2 LINE L2 -435 2879 2791 574 315 104 10 chr17 53553657 53553965 -35950588 - L2 LINE L2 -531 2783 2447 1477 127 24 0 chr17 53554224 53554436 -35950117 - AluSx SINE Alu -93 219 3 286 289 53 68 chr17 53554473 53554663 -35949890 + L2 LINE L2 2952 3138 -175 231 36 0 0 chr17 53557286 53557314 -35947239 + (CCA)n Simple_repeat Simple_repeat 2 29 0 2099 121 3 7 chr17 53557517 53557822 -35946731 - AluSx SINE Alu -8 304 1 335 337 11 6 chr17 53558059 53558142 -35946411 + GA-rich Low_complexity Low_complexity 2 83 -97 201 39 0 0 chr17 53558142 53558168 -35946385 + (TGGA)n Simple_repeat Simple_repeat 3 28 0 335 337 11 6 chr17 53558168 53558262 -35946291 + GA-rich Low_complexity Low_complexity 83 180 0 1087 113 0 189 chr17 53558838 53559218 -35945335 - AluYb8 SINE Alu 0 308 1 388 182 0 0 chr17 53559655 53559721 -35944832 + L2 LINE L2 3245 3310 -3 426 245 131 47 chr17 53559758 53559937 -35944616 - MIR3 SINE MIR -54 154 4 1997 106 0 4 chr17 53560621 53560922 -35943631 - AluSx SINE Alu 0 313 14 238 389 0 0 chr17 53561403 53561542 -35943011 + (TG)n Simple_repeat Simple_repeat 2 140 0 198 0 51 51 chr17 53562315 53562354 -35942199 + (TTA)n Simple_repeat Simple_repeat 2 40 0 351 239 0 0 chr17 53562389 53562460 -35942093 - L2 LINE L2 0 3313 3243 351 332 143 8 chr17 53562524 53562762 -35941791 + LTR33 LTR ERVL 55 324 -197 227 245 20 0 chr17 53563033 53563082 -35941471 + GA-rich Low_complexity Low_complexity 1 50 0 224 173 186 0 chr17 53563231 53563297 -35941256 + MIR SINE MIR 73 145 -63 841 164 0 8 chr17 53563339 53563473 -35941080 + FLAM_A SINE Alu 1 133 0 2230 64 6 25 chr17 53563476 53563790 -35940763 + AluY SINE Alu 1 308 -3 2173 107 0 19 chr17 53563961 53564269 -35940284 - AluSx SINE Alu -10 302 1 226 294 82 0 chr17 53564577 53564662 -35939891 - L2 LINE L2 -26 3246 3155 214 265 24 60 chr17 53565253 53565336 -35939217 + MIR3 SINE MIR 92 171 -37 223 370 41 27 chr17 53566248 53566394 -35938159 - L2 LINE L2 -215 3057 2910 366 310 192 8 chr17 53566410 53566655 -35937898 - L2 LINE L2 -537 2777 2488 583 278 34 11 chr17 53566917 53567093 -35937460 - MIR SINE MIR -79 183 4 279 317 41 16 chr17 53567169 53567292 -35937261 + L2 LINE L2 2939 3064 -208 1600 171 3 43 chr17 53568197 53568423 -35936130 - AluJo SINE Alu -20 292 80 2021 88 64 0 chr17 53568423 53568706 -35935847 + AluY SINE Alu 1 301 -10 1600 171 3 43 chr17 53568706 53568783 -35935770 - AluJo SINE Alu -232 80 1 476 295 86 45 chr17 53568839 53569083 -35935470 + MIR SINE MIR 9 262 0 528 224 110 131 chr17 53570068 53570305 -35934248 - MIR SINE MIR 0 262 31 1031 255 12 4 chr17 53570563 53570814 -35933739 + MIR SINE MIR 10 262 0 322 335 88 51 chr17 53570837 53571092 -35933461 - L2 LINE L2 -42 3230 2959 2242 108 0 0 chr17 53571092 53571397 -35933156 + AluSg SINE Alu 1 305 -5 322 335 88 51 chr17 53571397 53571472 -35933081 - L2 LINE L2 -313 2959 2888 642 171 126 60 chr17 53571883 53572056 -35932497 - MER5A DNA MER1_type 0 189 4 640 251 6 42 chr17 53572070 53572237 -35932316 + MER5B DNA MER1_type 4 164 -14 217 246 0 43 chr17 53572584 53572653 -35931900 + G-rich Low_complexity Low_complexity 2 67 0 755 169 72 18 chr17 53572753 53572919 -35931634 + MLT1B LTR MaLR 9 183 -207 678 144 77 123 chr17 53573009 53573140 -35931413 + MLT1B LTR MaLR 189 310 -64 2300 112 0 0 chr17 53573140 53573452 -35931101 - AluSx SINE Alu 0 312 1 678 144 77 123 chr17 53573452 53573515 -35931038 + MLT1B LTR MaLR 310 374 0 1361 225 92 23 chr17 53573607 53574042 -35930511 + MLT2B2 LTR ERVL 1 465 -50 493 137 11 11 chr17 53574072 53574167 -35930386 + CT-rich Low_complexity Low_complexity 2 96 0 468 270 26 18 chr17 53576806 53576943 -35927610 - MIR SINE MIR -61 147 10 562 203 0 180 chr17 53577370 53577587 -35926966 - FAM SINE Alu -7 42 1 185 329 120 19 chr17 53579506 53579664 -35924889 + MIR3 SINE MIR 6 179 -29 691 289 209 23 chr17 53579704 53580232 -35924321 - L2 LINE L2 -8 3305 2689 643 294 200 27 chr17 53581177 53581813 -35922740 - L2 LINE L2 -7 3306 2549 2193 99 0 19 chr17 53582340 53582652 -35921901 + AluSg SINE Alu 1 306 -4 249 325 18 53 chr17 53583630 53583744 -35920809 + MIR SINE MIR 103 212 -50 246 143 89 18 chr17 53583790 53583846 -35920707 + L2 LINE L2 3213 3272 0 * 313 295 93 39 chr17 53583844 53583973 -35920580 + L2 LINE L2 3178 3313 0 570 212 66 20 chr17 53584063 53584214 -35920339 - MIR SINE MIR -85 177 20 316 242 20 59 chr17 53584723 53584876 -35919677 + MER103 DNA DNA 8 154 -12 196 301 161 28 chr17 53584957 53585100 -35919453 - L2 LINE L2 -557 2757 2596 2424 93 0 0 chr17 53585776 53586086 -35918467 - AluSg SINE Alu 0 310 1 329 207 314 7 chr17 53586205 53586345 -35918208 + MIR3 SINE MIR 19 201 -7 1890 134 7 0 chr17 53586400 53586676 -35917877 + AluSx SINE Alu 33 310 -2 403 338 30 71 chr17 53586765 53587153 -35917400 + L2 LINE L2 2693 3074 -198 * 564 255 35 7 chr17 53587131 53587276 -35917277 - MIR SINE MIR -14 248 100 250 280 213 27 chr17 53587557 53587707 -35916846 + L2 LINE L2 3135 3312 -1 2083 142 199 14 chr17 53587798 53588220 -35916333 - MLT1D LTR MaLR -3 502 3 983 136 0 0 chr17 53588330 53588477 -35916076 - AluJb SINE Alu -30 282 136 255 125 0 0 chr17 53589111 53589151 -35915402 + (TG)n Simple_repeat Simple_repeat 2 41 0 211 352 80 0 chr17 53589477 53589565 -35914988 - MIR SINE MIR -55 207 113 371 279 79 36 chr17 53590685 53590825 -35913728 - MIR3 SINE MIR -18 190 45 657 213 112 12 chr17 53591357 53591526 -35913027 - MIR3 SINE MIR -5 203 18 740 355 75 48 chr17 53591697 53592178 -35912375 - L2 LINE L2 -2 3270 2803 2032 135 0 0 chr17 53592178 53592475 -35912078 - AluSx SINE Alu -5 307 11 740 355 75 48 chr17 53592475 53592982 -35911571 - L2 LINE L2 -469 2803 2250 485 296 20 7 chr17 53592982 53593134 -35911419 + MIR SINE MIR 4 157 -105 197 208 132 0 chr17 53594496 53594549 -35910004 + MIR SINE MIR 76 135 -73 1194 305 55 44 chr17 53595105 53595839 -35908714 + L2 LINE L2 2415 3169 -144 232 388 0 0 chr17 53596954 53597034 -35907519 + MIR SINE MIR 66 145 -63 21 0 0 0 chr17 53597194 53597215 -35907338 + AT_rich Low_complexity Low_complexity 1 21 0 186 121 0 30 chr17 53598082 53598115 -35906438 + MIR SINE MIR 119 150 -112 2429 190 96 14 chr17 53598127 53598628 -35905925 + MLT1F LTR MaLR 1 542 0 191 237 9 123 chr17 53598768 53598882 -35905671 - MER5A DNA MER1_type -2 187 87 1571 175 45 7 chr17 53599059 53599328 -35905225 + AluJb SINE Alu 1 279 -33 2279 121 96 25 chr17 53599328 53599725 -35904828 - MSTA LTR MaLR -3 425 1 230 316 26 0 chr17 53599778 53599854 -35904699 - MIR SINE MIR -181 81 4 430 272 38 43 chr17 53600290 53600426 -35904127 + MIR SINE MIR 79 215 -47 2157 129 0 0 chr17 53600426 53600736 -35903817 + AluSq SINE Alu 1 310 -3 430 272 38 43 chr17 53600736 53600783 -35903770 + MIR SINE MIR 215 261 -1 341 318 105 36 chr17 53600786 53600817 -35903736 + L2 LINE L2 2833 2860 -412 351 0 0 0 chr17 53600817 53600856 -35903697 + (CA)n Simple_repeat Simple_repeat 1 39 0 341 318 105 36 chr17 53600856 53601129 -35903424 + L2 LINE L2 2860 3158 -114 307 250 10 42 chr17 53602319 53602415 -35902138 + GA-rich Low_complexity Low_complexity 2 94 0 299 337 11 28 chr17 53602448 53602629 -35901924 + GA-rich Low_complexity Low_complexity 2 179 0 419 277 31 24 chr17 53602993 53603155 -35901398 - MIR SINE MIR -63 145 17 238 314 71 0 chr17 53603698 53603768 -35900785 - L2 LINE L2 -1 3312 3238 1384 179 35 4 chr17 53603887 53604144 -35900409 - AluJo SINE Alu -46 266 2 294 308 103 0 chr17 53604265 53604372 -35900181 + L2 LINE L2 3153 3270 -2 534 280 64 22 chr17 53604372 53604779 -35899774 - MLT1K LTR MaLR 0 588 125 2335 95 0 0 chr17 53605462 53605768 -35898785 - AluSc SINE Alu -3 306 1 395 299 81 52 chr17 53605984 53606255 -35898298 - L2 LINE L2 0 3272 2994 218 196 0 0 chr17 53607339 53607385 -35897168 + (CTA)n Simple_repeat Simple_repeat 1 46 0 553 255 26 63 chr17 53607387 53607641 -35896912 - MIR SINE MIR 0 262 23 242 248 9 0 chr17 53607698 53607807 -35896746 + CT-rich Low_complexity Low_complexity 1 110 0 401 242 16 65 chr17 53608175 53608361 -35896192 + CT-rich Low_complexity Low_complexity 1 177 0 210 384 45 0 chr17 53609690 53609802 -35894751 - L2 LINE L2 -452 2862 2746 193 305 57 38 chr17 53611287 53611392 -35893161 - MIR SINE MIR -60 148 42 246 284 41 36 chr17 53611407 53611545 -35893008 + MIR3 SINE MIR 41 182 -26 2137 92 7 0 chr17 53611602 53611925 -35892628 - AluY SINE Alu 0 325 1 346 347 61 0 chr17 53612701 53612926 -35891627 - MIR SINE MIR 0 262 21 1832 151 0 4 chr17 53613004 53613282 -35891271 + AluJo SINE Alu 13 289 -23 242 113 0 19 chr17 53613290 53613343 -35891210 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 444 309 7 15 chr17 53614667 53614803 -35889750 + MIR SINE MIR 62 196 -66 320 302 9 17 chr17 53615619 53615735 -35888818 + (ATGGTG)n Simple_repeat Simple_repeat 5 119 0 306 237 0 0 chr17 53615737 53615834 -35888719 + (TGG)n Simple_repeat Simple_repeat 1 97 0 2066 113 3 0 chr17 53615965 53616278 -35888275 + AluSx SINE Alu 1 314 0 410 246 59 25 chr17 53616301 53616419 -35888134 + L2 LINE L2 3189 3310 -3 402 251 131 47 chr17 53616456 53616635 -35887918 - MIR3 SINE MIR -54 154 4 1997 106 0 4 chr17 53617319 53617620 -35886933 - AluSx SINE Alu 0 313 14 238 389 0 0 chr17 53618101 53618240 -35886313 + (TG)n Simple_repeat Simple_repeat 2 140 0 23 86 0 0 chr17 53618917 53618975 -35885578 + GC_rich Low_complexity Low_complexity 1 58 0 208 261 17 35 chr17 53619778 53619893 -35884660 + GA-rich Low_complexity Low_complexity 5 117 0 466 244 25 8 chr17 53620707 53620826 -35883727 - MIR SINE MIR -68 140 20 437 362 53 8 chr17 53621665 53621911 -35882642 - MIR SINE MIR -3 259 3 534 285 79 7 chr17 53622639 53622841 -35881712 - MIR SINE MIR -2 260 48 240 263 0 0 chr17 53623112 53623169 -35881384 - MIR SINE MIR -64 198 142 2249 98 0 0 chr17 53623277 53623605 -35880948 - AluY SINE Alu 0 311 1 322 327 117 52 chr17 53624085 53624333 -35880220 - L2 LINE L2 -19 3253 2990 580 258 103 0 chr17 53625290 53625445 -35879108 - MER91A DNA MER1_type -25 171 1 203 179 0 71 chr17 53625936 53625992 -35878561 + G-rich Low_complexity Low_complexity 3 54 0 543 31 0 0 chr17 53626531 53626596 -35877957 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 1843 183 0 16 chr17 53626625 53626942 -35877611 - AluSx SINE Alu 0 312 1 271 265 15 0 chr17 53627715 53627783 -35876770 + CT-rich Low_complexity Low_complexity 1 69 0 542 265 115 15 chr17 53628176 53628376 -35876177 - MIR SINE MIR -8 254 35 2131 141 0 0 chr17 53628491 53628803 -35875750 - AluSx SINE Alu 0 312 1 308 306 0 0 chr17 53629321 53629393 -35875160 + MER91A DNA MER1_type 14 85 -111 207 292 124 0 chr17 53630894 53630983 -35873570 + MIR SINE MIR 44 143 -65 503 357 33 0 chr17 53633800 53633982 -35870571 - MIR3 SINE MIR 0 208 21 252 59 0 0 chr17 53634583 53634617 -35869936 + (TCCTG)n Simple_repeat Simple_repeat 1 34 0 459 271 75 38 chr17 53635006 53635373 -35869180 - L1MC4a LINE L1 -135 5986 5619 381 320 27 7 chr17 53637258 53637405 -35867148 - MIR3 SINE MIR -7 201 52 207 69 0 0 chr17 53637773 53637802 -35866751 + (CA)n Simple_repeat Simple_repeat 2 30 0 459 321 138 36 chr17 53639871 53640322 -35864231 - L2 LINE L2 -78 3194 2655 1951 142 0 19 chr17 53640322 53640640 -35863913 - AluJb SINE Alu 0 312 1 459 321 138 36 chr17 53640640 53640820 -35863733 - L2 LINE L2 -617 2655 2495 1832 132 57 88 chr17 53640882 53641052 -35863501 + THE1C LTR MaLR 1 175 -200 2159 116 3 0 chr17 53641052 53641363 -35863190 + AluSx SINE Alu 1 312 0 1832 132 57 88 chr17 53641363 53641511 -35863042 + THE1C LTR MaLR 175 307 -68 2174 129 0 0 chr17 53641511 53641813 -35862740 + AluSx SINE Alu 1 302 -10 1832 132 57 88 chr17 53641813 53641880 -35862673 + THE1C LTR MaLR 307 375 0 216 0 0 0 chr17 53642016 53642040 -35862513 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 831 148 0 0 chr17 53642040 53642162 -35862391 - FLAM_C SINE Alu -21 122 1 186 304 98 18 chr17 53642184 53642296 -35862257 - L2 LINE L2 -232 3040 2920 476 307 201 20 chr17 53642340 53642737 -35861816 + L2 LINE L2 2845 3313 0 726 124 31 176 chr17 53642752 53642956 -35861597 - MER33 DNA MER1_type -2261 324 183 750 146 0 31 chr17 53642956 53643086 -35861467 - FLAM_C SINE Alu -6 127 2 726 124 31 176 chr17 53643086 53643204 -35861349 - MER33 DNA MER1_type -2402 183 49 375 267 78 39 chr17 53644761 53644941 -35859612 - MLT1K LTR MaLR -6 582 396 217 343 12 68 chr17 53645340 53645591 -35858962 - L2 LINE L2 -150 3122 2886 * 285 340 102 0 chr17 53645582 53645847 -35858706 - L2 LINE L2 -742 2572 2281 1241 188 27 15 chr17 53645849 53646110 -35858443 + Tigger7 DNA MER2_type 4 267 -466 391 198 47 0 chr17 53646109 53646195 -35858358 + Tigger7 DNA MER2_type 2490 2579 -8 * 181 314 190 38 chr17 53646279 53646626 -35857927 - L2 LINE L2 -1163 2151 1752 1984 140 7 3 chr17 53646773 53647066 -35857487 + AluSx SINE Alu 11 304 -8 320 282 131 14 chr17 53648194 53648369 -35856184 - MIR SINE MIR -50 212 22 236 194 15 60 chr17 53648402 53648469 -35856084 + G-rich Low_complexity Low_complexity 1 64 0 1928 163 0 3 chr17 53649145 53649445 -35855108 + AluSx SINE Alu 1 299 -13 640 285 33 37 chr17 53649448 53649662 -35854891 + MIR SINE MIR 28 240 -22 411 277 39 9 chr17 53650655 53650809 -35853744 - MIR3 SINE MIR -50 158 50 2069 99 44 0 chr17 53651204 53651498 -35853055 + AluSq SINE Alu 1 307 -6 2238 125 0 0 chr17 53653018 53653330 -35851223 - AluSx SINE Alu 0 312 1 196 434 56 5 chr17 53653331 53653527 -35851026 + L2 LINE L2 2147 2352 -962 1475 166 70 32 chr17 53653636 53653920 -35850633 - AluJo SINE Alu -17 295 1 5330 150 38 35 chr17 53653920 53654910 -35849643 - L1MC1 LINE L1 -8 6325 5340 2227 107 0 13 chr17 53654910 53655218 -35849335 - AluSg SINE Alu -6 304 1 5330 150 38 35 chr17 53655218 53655558 -35848995 - L1MC1 LINE L1 -993 5340 5003 219 69 0 0 chr17 53655558 53655587 -35848966 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1957 111 0 11 chr17 53655588 53655858 -35848695 - AluSx SINE Alu -32 280 14 5330 150 38 35 chr17 53655858 53656103 -35848450 - L1MC1 LINE L1 -1329 5004 4750 2158 114 0 0 chr17 53656103 53656402 -35848151 - AluSg SINE Alu -11 299 1 2197 235 8 4 chr17 53656416 53656923 -35847630 - L1MC1 LINE L1 -2194 3952 3444 1147 195 0 25 chr17 53656941 53656963 -35847590 - AluJb SINE Alu 0 312 291 1997 123 0 37 chr17 53656963 53657287 -35847266 - AluSx SINE Alu 0 312 1 1147 195 0 25 chr17 53657287 53657500 -35847053 - AluJb SINE Alu -21 291 83 374 257 37 9 chr17 53657665 53657774 -35846779 + MIR SINE MIR 42 153 -55 236 200 20 0 chr17 53657790 53657840 -35846713 + HAL1 LINE L1 2095 2145 -362 2132 128 3 0 chr17 53657997 53658309 -35846244 + AluSq SINE Alu 1 313 0 457 273 75 52 chr17 53658422 53658689 -35845864 + HAL1 LINE L1 2229 2501 -6 1695 149 11 25 chr17 53658727 53659009 -35845544 + AluJb SINE Alu 1 278 -34 216 0 0 0 chr17 53659010 53659034 -35845519 + (T)n Simple_repeat Simple_repeat 1 24 0 507 207 62 142 chr17 53659075 53659139 -35845414 - L1MA10 LINE L1 0 6292 6224 2294 47 0 0 chr17 53659139 53659417 -35845136 - AluY SINE Alu -32 279 2 507 207 62 142 chr17 53659417 53659593 -35844960 - L1MA10 LINE L1 -68 6224 5952 2249 80 3 7 chr17 53659593 53659894 -35844659 - AluY SINE Alu -11 300 1 507 207 62 142 chr17 53659894 53659931 -35844622 - L1MA10 LINE L1 -340 5952 5914 1722 160 6 26 chr17 53659931 53660244 -35844309 + AluSx SINE Alu 1 307 -5 1591 131 69 0 chr17 53660251 53660526 -35844027 - Tigger1 DNA MER2_type -161 2257 1964 21 57 0 0 chr17 53661034 53661069 -35843484 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr17 53661287 53661312 -35843241 + AT_rich Low_complexity Low_complexity 1 25 0 6322 127 75 40 chr17 53661487 53663314 -35841239 - Tigger1 DNA MER2_type -443 1975 1 2166 96 6 13 chr17 53663336 53663648 -35840905 - AluSg SINE Alu 0 310 1 6699 150 32 65 chr17 53663649 53663781 -35840772 - L1MC3 LINE L1 -760 5386 5251 381 43 0 0 chr17 53663781 53663828 -35840725 + (CA)n Simple_repeat Simple_repeat 2 48 0 6699 150 32 65 chr17 53663828 53663927 -35840626 - L1MC3 LINE L1 -895 5251 5150 1753 191 0 7 chr17 53663927 53664230 -35840323 + AluJb SINE Alu 1 301 -11 6699 150 32 65 chr17 53664230 53664414 -35840139 - L1MC3 LINE L1 -996 5150 4961 1837 141 7 17 chr17 53664414 53664740 -35839813 - AluSx SINE Alu 0 312 1 6699 150 32 65 chr17 53664740 53665329 -35839224 - L1MC3 LINE L1 -1185 4961 5841 2200 102 0 3 chr17 53665329 53665632 -35838921 - AluSg SINE Alu -8 302 1 6699 150 32 65 chr17 53665632 53666480 -35838073 - L1MC3 LINE L1 -304 5842 4967 1006 133 0 7 chr17 53666492 53666686 -35837867 - AluSg/x SINE Alu 0 324 132 2296 85 3 0 chr17 53666686 53666980 -35837573 - AluSq SINE Alu -14 299 5 1052 144 21 5 chr17 53666992 53667180 -35837373 - L1MC3 LINE L1 -1199 4947 4757 * 1454 275 15 10 chr17 53667155 53667566 -35836987 - L1MEc LINE L1 -5941 455 43 2215 135 135 8 chr17 53667592 53667971 -35836582 - MSTA LTR MaLR 0 428 2 215 256 143 12 chr17 53668713 53668847 -35835706 - MER5B DNA MER1_type -36 142 8 1631 184 116 76 chr17 53670162 53670754 -35833799 - MLT1E1 LTR MaLR -11 624 2 312 329 53 57 chr17 53671313 53671541 -35833012 - L2 LINE L2 -22 3250 3024 235 298 33 53 chr17 53672809 53672960 -35831593 - L2 LINE L2 -88 3225 3078 217 340 83 13 chr17 53673245 53673401 -35831152 - L2 LINE L2 -510 2804 2638 192 333 94 0 chr17 53673573 53673669 -35830884 - L2 LINE L2 -25 3247 3143 1967 125 0 14 chr17 53674378 53674549 -35830004 - AluSx SINE Alu 0 303 136 2119 114 10 0 chr17 53674549 53674856 -35829697 - AluSp SINE Alu -3 310 1 1967 125 0 14 chr17 53674856 53674991 -35829562 - AluSx SINE Alu -167 136 1 423 0 0 0 chr17 53676775 53676822 -35827731 + (CA)n Simple_repeat Simple_repeat 1 47 0 352 322 54 29 chr17 53677422 53677664 -35826889 + L2 LINE L2 2844 3091 -181 240 268 18 0 chr17 53678048 53678104 -35826449 + L2 LINE L2 3137 3193 -79 * 257 248 124 9 chr17 53678089 53678194 -35826359 + MIR SINE MIR 113 229 -33 359 311 96 17 chr17 53678209 53678386 -35826167 - MIR SINE MIR -44 218 28 190 270 68 14 chr17 53680367 53680441 -35824112 - MIR3 SINE MIR -25 183 106 332 264 97 113 chr17 53681032 53681343 -35823210 - L2 LINE L2 -5 3308 3003 * 398 337 45 17 chr17 53681336 53681514 -35823039 - L2 LINE L2 -504 2810 2628 196 154 39 0 chr17 53681514 53681566 -35822987 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 1679 186 3 3 chr17 53681667 53681974 -35822579 - AluJb SINE Alu -5 307 1 180 0 0 0 chr17 53682178 53682198 -35822355 + (CA)n Simple_repeat Simple_repeat 1 20 0 3223 173 81 33 chr17 53682198 53682304 -35822249 + L1MC3 LINE L1 6934 7033 -752 2073 123 0 0 chr17 53682304 53682596 -35821957 + AluSx SINE Alu 1 292 -20 3223 173 81 33 chr17 53682596 53683302 -35821251 + L1MC3 LINE L1 7033 7785 0 2017 130 0 34 chr17 53683316 53683639 -35820914 - AluSx SINE Alu 0 312 1 15393 107 30 50 chr17 53683755 53683948 -35820605 + Tigger1 DNA MER2_type 4 199 -2219 2082 138 3 0 chr17 53683948 53684259 -35820294 - AluSx SINE Alu 0 312 1 15393 107 30 50 chr17 53684259 53685532 -35819021 + Tigger1 DNA MER2_type 199 1496 -922 2174 94 3 13 chr17 53685532 53685839 -35818714 + AluSp SINE Alu 1 304 -9 15393 107 30 50 chr17 53685839 53685918 -35818635 + Tigger1 DNA MER2_type 1496 1575 -843 1432 205 45 3 chr17 53685918 53686206 -35818347 + AluJo SINE Alu 1 300 -12 2065 101 24 0 chr17 53686206 53686483 -35818070 + AluSx SINE Alu 1 287 -25 1025 58 7 0 chr17 53686483 53686620 -35817933 + (GGAA)n Simple_repeat Simple_repeat 3 140 0 15393 107 30 50 chr17 53686629 53686681 -35817872 + Tigger1 DNA MER2_type 1574 1626 -792 2120 102 0 20 chr17 53686681 53686984 -35817569 + AluSq SINE Alu 1 297 -16 15393 107 30 50 chr17 53686984 53687497 -35817056 + Tigger1 DNA MER2_type 1626 2148 -270 2265 104 3 0 chr17 53687497 53687806 -35816747 + AluSx SINE Alu 3 312 0 15393 107 30 50 chr17 53687806 53687817 -35816736 + Tigger1 DNA MER2_type 2148 2158 -260 1764 131 0 64 chr17 53687817 53687967 -35816586 + AluJb SINE Alu 3 124 -188 1607 52 0 0 chr17 53687967 53688161 -35816392 + AluY SINE Alu 103 296 -15 1764 131 0 64 chr17 53688161 53688322 -35816231 + AluJb SINE Alu 124 294 -18 15393 107 30 50 chr17 53688322 53688658 -35815895 + Tigger1 DNA MER2_type 2158 2418 0 575 323 33 67 chr17 53688694 53688756 -35815797 - L1M4 LINE L1 -807 5339 5276 2085 89 16 16 chr17 53688756 53689069 -35815484 + AluSq SINE Alu 1 313 0 575 323 33 67 chr17 53689069 53689477 -35815076 - L1M4 LINE L1 -870 5276 4886 546 288 153 53 chr17 53689682 53690075 -35814478 - L2 LINE L2 0 3272 2841 540 224 6 60 chr17 53690175 53690358 -35814195 + MER113 DNA MER1_type? 45 217 -304 516 281 7 0 chr17 53690481 53690616 -35813937 + MIR SINE MIR 39 174 -88 219 316 178 26 chr17 53690677 53690829 -35813724 - L2 LINE L2 -556 2758 2584 488 230 333 0 chr17 53692247 53692421 -35812132 - MIR SINE MIR 0 262 31 1178 128 0 16 chr17 53692463 53692650 -35811903 - AluJ SINE Alu -4 308 125 341 306 23 81 chr17 53692677 53692938 -35811615 - L1MCa LINE L1 -4223 2203 1958 * 372 336 50 52 chr17 53692856 53693276 -35811277 + L1MC4 LINE L1 1850 6972 -1350 849 94 0 51 chr17 53693277 53693415 -35811138 - AluJ SINE Alu -181 131 1 2333 75 0 0 chr17 53693441 53693746 -35810807 - AluSx SINE Alu -7 305 1 24 0 0 0 chr17 53693841 53693865 -35810688 + GC_rich Low_complexity Low_complexity 1 24 0 263 318 56 16 chr17 53694282 53694408 -35810145 - MIR3 SINE MIR -68 140 10 565 318 145 34 chr17 53694831 53695626 -35808927 + L2 LINE L2 2435 3313 0 317 307 90 16 chr17 53695657 53695846 -35808707 + L2 LINE L2 2910 3112 -160 213 276 64 103 chr17 53696553 53696709 -35807844 + MER5A DNA MER1_type 36 185 -4 426 310 157 54 chr17 53696886 53697706 -35806847 + L2 LINE L2 2306 3269 -3 370 210 118 34 chr17 53697906 53698025 -35806528 - MIR3 SINE MIR -71 137 9 202 383 16 8 chr17 53698975 53699103 -35805450 + L3b LINE CR1 1289 1417 -166 198 0 0 0 chr17 53699382 53699404 -35805149 + (CCG)n Simple_repeat Simple_repeat 1 22 0 33 90 0 0 chr17 53699457 53699546 -35805007 + GC_rich Low_complexity Low_complexity 1 89 0 209 91 0 68 chr17 53700557 53700609 -35803944 + (TCCC)n Simple_repeat Simple_repeat 1 48 0 277 167 56 0 chr17 53701556 53701610 -35802943 + MIR SINE MIR 110 166 -96 285 275 22 80 chr17 53704535 53704639 -35799914 + MIR3 SINE MIR 59 155 -53 875 168 92 6 chr17 53704639 53704812 -35799741 - MER5A DNA MER1_type 0 189 2 285 275 22 80 chr17 53704812 53704845 -35799708 + MIR3 SINE MIR 155 188 -20 320 291 88 34 chr17 53707503 53707651 -35796902 + MIR SINE MIR 48 203 -59 1238 264 69 34 chr17 53707786 53708165 -35796388 + MLT1J LTR MaLR 1 392 -119 1519 102 23 5 chr17 53708165 53708380 -35796173 + AluSq SINE Alu 1 219 -94 545 121 44 22 chr17 53708435 53708526 -35796027 + AluSg/x SINE Alu 202 294 -15 515 177 65 65 chr17 53708526 53708588 -35795965 + MLT1J LTR MaLR 382 443 -68 2523 60 0 7 chr17 53708588 53708886 -35795667 - AluY SINE Alu -15 296 1 515 177 65 65 chr17 53708886 53708947 -35795606 + MLT1J LTR MaLR 442 505 -6 220 167 111 0 chr17 53708969 53709023 -35795530 + MIR SINE MIR 91 150 -112 2111 134 0 13 chr17 53709923 53710221 -35794332 - AluSx SINE Alu -18 294 1 2472 87 0 0 chr17 53711013 53711323 -35793230 + AluSg SINE Alu 1 310 0 644 275 35 0 chr17 53712144 53712315 -35792238 + MIR SINE MIR 5 181 -81 717 174 16 0 chr17 53713892 53714013 -35790540 - FLAM_A SINE Alu -10 123 1 2402 69 3 0 chr17 53714029 53714318 -35790235 - AluSp SINE Alu -23 290 1 318 236 226 5 chr17 53714773 53714957 -35789596 - MIR SINE MIR -11 251 22 1093 274 199 28 chr17 53715265 53716680 -35787873 + L2 LINE L2 1620 3284 -29 2203 117 0 3 chr17 53716984 53717282 -35787271 + AluSg SINE Alu 1 297 -13 1917 151 7 20 chr17 53717440 53717738 -35786815 - AluJo SINE Alu -18 294 1 1853 130 18 0 chr17 53717767 53718066 -35786487 + AluSx SINE Alu 1 304 0 970 188 94 1 chr17 53718111 53718423 -35786130 - MER63 DNA MER1_type 0 1060 677 2468 87 3 0 chr17 53718556 53718868 -35785685 + AluSp SINE Alu 1 313 0 315 308 179 5 chr17 53719082 53719390 -35785163 + L2 LINE L2 1746 3265 -7 233 303 0 0 chr17 53719404 53719470 -35785083 + MIR SINE MIR 82 147 -61 2401 90 7 0 chr17 53719564 53719863 -35784690 - AluSg SINE Alu -9 301 1 235 282 34 87 chr17 53722054 53722203 -35782350 + MIR SINE MIR 66 206 -56 27 29 0 0 chr17 53723131 53723165 -35781388 + AT_rich Low_complexity Low_complexity 1 34 0 246 242 0 0 chr17 53723304 53723366 -35781187 + T-rich Low_complexity Low_complexity 1 62 0 206 282 174 20 chr17 53724668 53724863 -35779690 + MIR SINE MIR 20 244 -18 195 83 42 21 chr17 53725156 53725204 -35779349 + (TTA)n Simple_repeat Simple_repeat 2 50 0 481 252 21 21 chr17 53728728 53728871 -35775682 - MER103 DNA DNA -2 164 22 238 243 0 57 chr17 53728953 53729023 -35775530 + HsTC2 DNA Tc2 2 67 -1831 968 192 9 64 chr17 53729149 53729245 -35775308 + MER2 DNA MER2_type 1 101 -244 2221 122 0 0 chr17 53729245 53729541 -35775012 + AluSx SINE Alu 1 296 -16 2364 105 0 3 chr17 53729543 53729856 -35774697 + AluSq SINE Alu 1 312 -1 968 192 9 64 chr17 53729856 53729975 -35774578 + MER2 DNA MER2_type 102 207 -138 1832 152 13 26 chr17 53729977 53730287 -35774266 - AluJo SINE Alu 0 312 7 2169 117 16 7 chr17 53730326 53730633 -35773920 - AluSx SINE Alu -2 310 1 234 203 237 0 chr17 53730642 53730701 -35773852 + MER2 DNA MER2_type 269 341 -4 571 269 8 0 chr17 53730870 53731000 -35773553 + MER94 DNA DNA 4 134 0 743 164 112 8 chr17 53732270 53732404 -35772149 + MER106B DNA MER1_type 2 149 -910 2169 121 0 19 chr17 53732739 53733046 -35771507 - AluSx SINE Alu -11 301 1 249 288 14 0 chr17 53733048 53733121 -35771432 + MIR SINE MIR 64 137 -125 2310 101 0 0 chr17 53734055 53734353 -35770200 - AluSx SINE Alu -11 301 4 1881 165 3 7 chr17 53735724 53736021 -35768532 - AluJb SINE Alu -16 296 1 25 31 0 0 chr17 53737098 53737130 -35767423 + AT_rich Low_complexity Low_complexity 1 32 0 513 225 99 25 chr17 53738031 53738263 -35766290 + L1ME3A LINE L1 5687 5945 -225 229 290 0 0 chr17 53738476 53738538 -35766015 - MER116 DNA Mariner -13 67 6 378 0 0 0 chr17 53738640 53738682 -35765871 + (TG)n Simple_repeat Simple_repeat 2 43 0 1901 127 0 35 chr17 53738704 53738988 -35765565 - AluJo SINE Alu -26 286 13 314 150 33 0 chr17 53738994 53739054 -35765499 + FAM SINE Alu 114 175 -4 225 0 0 0 chr17 53739328 53739353 -35765200 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 852 209 0 6 chr17 53739353 53739516 -35765037 - FAM SINE Alu -13 162 1 299 167 0 0 chr17 53739909 53739951 -35764602 + 5S rRNA rRNA 1 42 -79 2423 110 0 0 chr17 53741479 53741789 -35762764 + AluSx SINE Alu 1 310 -2 1850 164 31 3 chr17 53743370 53743662 -35760891 - AluJb SINE Alu -12 300 1 2350 93 0 34 chr17 53743714 53744035 -35760518 + AluSq SINE Alu 1 310 -3 1986 120 64 0 chr17 53744041 53744324 -35760229 + AluSx SINE Alu 1 301 -11 739 205 35 23 chr17 53745325 53745496 -35759057 + Charlie8 DNA MER1_type 102 274 -2143 615 174 34 27 chr17 53745594 53745743 -35758810 - L2 LINE L2 -4 3309 3160 2225 91 17 7 chr17 53746848 53747145 -35757408 - AluSp SINE Alu -13 300 1 1279 209 35 3 chr17 53747969 53748146 -35756407 + L1MA9 LINE L1 5982 6173 -139 378 107 0 0 chr17 53748146 53748202 -35756351 + (CA)n Simple_repeat Simple_repeat 2 57 0 1279 209 35 3 chr17 53748202 53748307 -35756246 + L1MA9 LINE L1 6173 6273 -39 1908 155 0 16 chr17 53748307 53748611 -35755942 - AluJb SINE Alu -13 299 1 22 35 0 0 chr17 53748720 53748749 -35755804 + AT_rich Low_complexity Low_complexity 1 29 0 590 131 138 0 chr17 53748843 53748973 -35755580 - MER5A DNA MER1_type -2 187 40 301 318 45 22 chr17 53748983 53749164 -35755389 + L1ME LINE L1 5646 5839 -331 2377 95 3 0 chr17 53749164 53749470 -35755083 + AluSp SINE Alu 1 307 -6 301 318 45 22 chr17 53749470 53749523 -35755030 + L1ME LINE L1 5839 5889 -281 1960 114 4 22 chr17 53750250 53750523 -35754030 + AluSx SINE Alu 1 268 -44 2416 72 7 0 chr17 53750694 53750986 -35753567 - AluY SINE Alu -17 294 1 983 141 170 24 chr17 53752387 53752593 -35751960 + MER46A DNA MER2_type 1 236 0 2250 105 7 0 chr17 53752799 53753095 -35751458 + AluSg SINE Alu 1 298 -12 360 182 39 0 chr17 53753740 53753817 -35750736 - MER116 DNA Mariner 0 80 1 22 0 0 0 chr17 53754445 53754467 -35750086 + AT_rich Low_complexity Low_complexity 1 22 0 728 207 0 0 chr17 53754467 53754588 -35749965 - FLAM_C SINE Alu -21 122 2 1369 228 141 21 chr17 53754659 53755141 -35749412 + L1MC4a LINE L1 5292 5831 -1977 235 273 73 9 chr17 53755229 53755339 -35749214 + L1MC4a LINE L1 6058 6174 -1634 762 239 154 52 chr17 53755587 53755917 -35748636 + L2 LINE L2 2945 3308 -5 1958 111 82 0 chr17 53756327 53756607 -35747946 - AluSq SINE Alu -10 303 1 2363 100 3 0 chr17 53759470 53759771 -35744782 - AluSx SINE Alu -10 302 1 2006 165 3 0 chr17 53759826 53760135 -35744418 - AluJb SINE Alu -2 310 1 1349 147 11 82 chr17 53760811 53761090 -35743463 + AluSx SINE Alu 44 302 -10 2200 113 0 3 chr17 53761197 53761488 -35743065 - AluSx SINE Alu -22 290 1 657 163 259 15 chr17 53761712 53761847 -35742706 - FAM SINE Alu -7 168 1 2163 100 14 3 chr17 53762145 53762434 -35742119 + AluSc SINE Alu 1 292 -17 1316 125 0 5 chr17 53762627 53762811 -35741742 + AluSq SINE Alu 61 243 -70 311 214 146 11 chr17 53762855 53762944 -35741609 - L2 LINE L2 -4 3268 3168 1460 213 101 117 chr17 53763095 53763799 -35740754 + L1ME3A LINE L1 5470 6162 -8 2176 117 0 10 chr17 53763805 53764103 -35740450 + AluSx SINE Alu 1 295 -17 970 285 94 29 chr17 53764472 53764818 -35739735 + L2 LINE L2 2710 3113 -200 2439 100 0 0 chr17 53764818 53765128 -35739425 + AluSx SINE Alu 1 310 -2 970 285 94 29 chr17 53765128 53765341 -35739212 + L2 LINE L2 3113 3311 -2 2179 101 0 13 chr17 53765577 53765875 -35738678 + AluSx SINE Alu 1 294 -18 298 277 26 59 chr17 53765892 53766021 -35738532 + L1M2 LINE L1 5488 5586 -714 662 111 0 8 chr17 53766134 53766342 -35738211 + AluSx SINE Alu 32 292 -17 2277 105 7 0 chr17 53767486 53767790 -35736763 + AluSx SINE Alu 1 306 -6 975 114 0 0 chr17 53767921 53768044 -35736509 + FLAM_C SINE Alu 1 123 -10 289 208 72 61 chr17 53768321 53768510 -35736043 + L1MC/D LINE L1 5659 5847 -333 228 214 0 0 chr17 53768556 53768612 -35735941 + (TA)n Simple_repeat Simple_repeat 1 56 0 213 39 0 0 chr17 53768653 53768679 -35735874 + (CATA)n Simple_repeat Simple_repeat 1 26 0 2094 122 20 10 chr17 53769129 53769432 -35735121 - AluSg SINE Alu -4 306 1 1643 99 170 8 chr17 53770119 53770372 -35734181 + AluSg1 SINE Alu 1 294 -15 275 302 99 13 chr17 53770494 53770685 -35733868 - MIR SINE MIR -31 231 30 1906 119 0 71 chr17 53770845 53771181 -35733372 + AluSx SINE Alu 1 312 0 2271 110 0 22 chr17 53771299 53771618 -35732935 - AluSx SINE Alu 0 312 1 775 299 229 9 chr17 53771853 53772315 -35732238 + L2 LINE L2 2414 2977 -337 2493 54 3 0 chr17 53772599 53772894 -35731659 - AluY SINE Alu -15 296 1 2116 106 7 0 chr17 53773093 53773386 -35731167 + AluSq SINE Alu 1 295 -18 2466 59 10 0 chr17 53773388 53773692 -35730861 + AluY SINE Alu 1 307 -4 2307 88 3 3 chr17 53773731 53774028 -35730525 - AluSp SINE Alu -16 297 1 2323 94 0 0 chr17 53774135 53774422 -35730131 + AluSx SINE Alu 1 287 -25 224 293 0 40 chr17 53774646 53774721 -35729832 + L2 LINE L2 3201 3272 0 384 273 13 84 chr17 53774741 53774895 -35729658 - MIR3 SINE MIR -31 177 35 2205 106 14 0 chr17 53775574 53775866 -35728687 + AluSx SINE Alu 1 296 -16 1218 157 129 5 chr17 53775900 53776110 -35728443 + MER46A DNA MER2_type 1 236 0 237 197 61 15 chr17 53776945 53777011 -35727542 + MIR3 SINE MIR 128 196 -12 24 32 0 0 chr17 53777247 53777278 -35727275 + AT_rich Low_complexity Low_complexity 1 31 0 237 152 63 13 chr17 53777626 53777705 -35726848 + (TA)n Simple_repeat Simple_repeat 1 83 0 638 239 0 8 chr17 53778100 53778230 -35726323 - FLAM_A SINE Alu -4 129 1 207 265 0 0 chr17 53778254 53778303 -35726250 + L2 LINE L2 3261 3309 -4 180 111 0 0 chr17 53778333 53778360 -35726193 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1822 139 4 4 chr17 53778372 53778652 -35725901 + AluSx SINE Alu 33 312 0 2513 60 0 0 chr17 53779068 53779370 -35725183 + AluY SINE Alu 2 303 -8 2396 82 0 3 chr17 53779656 53779949 -35724604 - AluSp SINE Alu -21 292 1 2413 57 0 48 chr17 53780737 53781052 -35723501 + AluY SINE Alu 1 300 -11 729 240 87 59 chr17 53781154 53781241 -35723312 + HAL1b LINE L1 1186 1269 -79 2247 106 0 0 chr17 53781241 53781534 -35723019 - AluSg SINE Alu -17 293 1 2296 95 0 10 chr17 53781534 53781838 -35722715 - AluSc SINE Alu -8 301 1 729 240 87 59 chr17 53781838 53782225 -35722328 + HAL1b LINE L1 1268 1348 0 251 355 101 0 chr17 53782809 53782978 -35721575 - L2 LINE L2 -338 2976 2791 240 318 144 42 chr17 53783137 53783470 -35721083 + L2 LINE L2 2308 2674 -640 1352 260 183 40 chr17 53783473 53784448 -35720105 + L2 LINE L2 2183 3302 -11 254 333 116 39 chr17 53784448 53784520 -35720033 + L2 LINE L2 3034 3099 -214 2364 74 0 7 chr17 53784520 53784817 -35719736 + AluY SINE Alu 1 295 -16 254 333 116 39 chr17 53784817 53785002 -35719551 + L2 LINE L2 3099 3311 -2 2391 92 3 0 chr17 53785569 53785874 -35718679 + AluSp SINE Alu 1 306 -7 2350 73 0 17 chr17 53786237 53786538 -35718015 + AluSx SINE Alu 1 296 -16 1031 170 47 12 chr17 53786742 53786912 -35717641 + Charlie1a DNA MER1_type 5 180 -1275 1951 137 24 12 chr17 53786912 53787247 -35717306 + MER1B DNA MER1_type 1 339 0 * 5950 171 75 8 chr17 53787247 53788455 -35716098 + Charlie1a DNA MER1_type 165 1455 0 2370 77 3 3 chr17 53789170 53789469 -35715084 + AluY SINE Alu 1 299 -12 417 20 0 0 chr17 53789483 53789533 -35715020 + (CA)n Simple_repeat Simple_repeat 2 51 0 2283 95 17 0 chr17 53789539 53789833 -35714720 + AluSx SINE Alu 1 299 -13 519 255 89 97 chr17 53789848 53790282 -35714271 + L1MB2 LINE L1 4686 5117 -1029 417 20 0 0 chr17 53790282 53790332 -35714221 + (CA)n Simple_repeat Simple_repeat 2 51 0 519 255 89 97 chr17 53790332 53790380 -35714173 + L1MB2 LINE L1 5117 5164 -982 2036 141 0 3 chr17 53790383 53790682 -35713871 + AluSx SINE Alu 1 298 -14 2252 115 3 0 chr17 53790734 53791038 -35713515 + AluSq SINE Alu 1 305 -8 240 108 0 0 chr17 53791044 53791081 -35713472 + L1MB2 LINE L1 5451 5487 -684 4005 142 45 3 chr17 53791131 53791145 -35713408 + L1MB2 LINE L1 5478 5490 -681 2056 143 3 0 chr17 53791145 53791445 -35713108 + AluSx SINE Alu 1 301 -11 4005 142 45 3 chr17 53791445 53792093 -35712460 + L1MB2 LINE L1 5490 6168 -3 323 271 66 30 chr17 53792102 53792268 -35712285 + L1ME1 LINE L1 5707 5878 -288 305 289 67 0 chr17 53792456 53792546 -35712007 + L1MC4 LINE L1 7931 8026 -16 252 212 0 0 chr17 53792546 53792612 -35711941 + (TA)n Simple_repeat Simple_repeat 2 67 0 2474 53 0 10 chr17 53792613 53792913 -35711640 - AluY SINE Alu -14 297 1 2314 86 3 0 chr17 53792913 53793204 -35711349 - AluSx SINE Alu -20 292 1 25 0 0 0 chr17 53793208 53793233 -35711320 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr17 53793252 53793281 -35711272 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr17 53793297 53793322 -35711231 + AT_rich Low_complexity Low_complexity 1 25 0 2426 90 0 0 chr17 53793322 53793622 -35710931 + AluSc SINE Alu 1 300 -9 544 43 86 0 chr17 53795130 53795200 -35709353 + MADE1 DNA Mariner 3 78 -2 452 215 202 25 chr17 53795262 53795556 -35708997 + L1MC4 LINE L1 6768 7077 -884 991 126 0 0 chr17 53795561 53795696 -35708857 + AluSq/x SINE Alu 1 135 -178 2211 107 0 0 chr17 53795696 53795987 -35708566 + AluY SINE Alu 1 291 -20 1181 261 135 63 chr17 53796010 53796502 -35708051 + L1MC4 LINE L1 7098 7553 -489 2146 134 0 0 chr17 53796502 53796801 -35707752 + AluSx SINE Alu 1 299 -13 1181 261 135 63 chr17 53796801 53797061 -35707492 + L1MC4 LINE L1 7553 7793 -249 2420 59 0 3 chr17 53797061 53797370 -35707183 + AluY SINE Alu 1 308 0 1181 261 135 63 chr17 53797370 53797488 -35707065 + L1MC4 LINE L1 7793 8033 -9 2271 103 3 3 chr17 53797702 53798012 -35706541 + AluSp SINE Alu 1 310 -3 1951 123 0 17 chr17 53798021 53798322 -35706231 - L1 LINE L1 -2475 3671 3376 1165 236 173 34 chr17 53798770 53799390 -35705163 + L1MC4a LINE L1 5410 6115 -1693 2239 104 7 7 chr17 53799575 53799882 -35704671 + AluSx SINE Alu 1 307 -5 222 412 0 0 chr17 53801753 53801855 -35702698 + T-rich Low_complexity Low_complexity 1 102 0 * 244 355 0 13 chr17 53801814 53801890 -35702663 + polypyrimidine Low_complexity Low_complexity 30 104 0 230 373 0 0 chr17 53801988 53802055 -35702498 + polypyrimidine Low_complexity Low_complexity 2 68 0 306 304 161 56 chr17 53802748 53803288 -35701265 + L1M2 LINE L1 525 1121 -5728 265 167 56 0 chr17 53803706 53803760 -35700793 + MIR SINE MIR 110 166 -96 1791 132 0 82 chr17 53806627 53806967 -35697586 - AluSx SINE Alu 0 312 1 275 302 99 13 chr17 53807128 53807319 -35697234 + MIR SINE MIR 30 231 -31 1601 98 173 16 chr17 53807441 53807696 -35696857 - AluSg SINE Alu -15 295 1 1987 124 19 23 chr17 53808388 53808695 -35695858 + AluSg SINE Alu 1 306 -4 213 39 0 0 chr17 53809146 53809172 -35695381 + (TATG)n Simple_repeat Simple_repeat 1 26 0 362 284 68 56 chr17 53809194 53809438 -35695115 - L1ME2 LINE L1 -200 5970 5725 945 114 0 0 chr17 53809784 53809907 -35694646 - FLAM_C SINE Alu -10 123 1 2268 104 7 10 chr17 53810038 53810345 -35694208 - AluSx SINE Alu -6 306 1 643 88 0 0 chr17 53811495 53811575 -35692978 - AluSx SINE Alu -17 293 214 878 125 0 16 chr17 53811576 53811704 -35692849 - AluSx SINE Alu -155 157 32 281 269 19 67 chr17 53811842 53811946 -35692607 - L1M2 LINE L1 -714 5586 5488 2247 97 0 13 chr17 53811963 53812261 -35692292 - AluSx SINE Alu -18 294 1 764 270 22 18 chr17 53812673 53812947 -35691606 - AluSq SINE Alu -37 276 2 1735 155 3 23 chr17 53813022 53813326 -35691227 + AluJo SINE Alu 1 298 -14 215 175 0 16 chr17 53815156 53815219 -35689334 + (CA)n Simple_repeat Simple_repeat 2 63 0 183 80 0 0 chr17 53815302 53815327 -35689226 + (TCCCC)n Simple_repeat Simple_repeat 2 26 0 2120 105 19 42 chr17 53815797 53815936 -35688617 + AluSx SINE Alu 7 148 -164 2465 38 55 0 chr17 53815936 53816229 -35688324 + AluY SINE Alu 1 309 -2 2120 105 19 42 chr17 53816229 53816402 -35688151 + AluSx SINE Alu 148 312 0 2458 53 3 0 chr17 53816410 53816726 -35687827 + AluY SINE Alu 1 317 0 27 0 0 0 chr17 53816949 53816976 -35687577 + AT_rich Low_complexity Low_complexity 1 27 0 1938 135 36 0 chr17 53816980 53817261 -35687292 + AluJo SINE Alu 1 291 -21 929 159 6 37 chr17 53817274 53817437 -35687116 + FRAM SINE Alu 18 175 -1 237 65 0 0 chr17 53817491 53817522 -35687031 + (CA)n Simple_repeat Simple_repeat 2 32 0 2290 91 0 3 chr17 53818034 53818320 -35686233 + AluSx SINE Alu 11 295 -17 378 276 111 40 chr17 53820070 53820218 -35684335 + MIR SINE MIR 32 199 -63 1853 141 21 3 chr17 53820218 53820377 -35684176 - AluSx SINE Alu -15 297 129 2418 56 38 0 chr17 53820377 53820665 -35683888 - AluY SINE Alu -12 299 1 1853 141 21 3 chr17 53820665 53820795 -35683758 - AluSx SINE Alu -183 129 3 378 276 111 40 chr17 53820795 53820845 -35683708 + MIR SINE MIR 199 244 -18 182 250 83 0 chr17 53821023 53821083 -35683470 + MIR SINE MIR 67 131 -131 327 280 56 14 chr17 53821086 53821229 -35683324 - LTR67 LTR ERVL -3 554 406 252 0 0 0 chr17 53821331 53821359 -35683194 + (CTG)n Simple_repeat Simple_repeat 3 30 0 882 218 15 10 chr17 53821711 53821908 -35682645 + AluJo SINE Alu 114 311 -1 1829 149 46 13 chr17 53821909 53822211 -35682342 + AluJb SINE Alu 1 312 0 184 289 0 0 chr17 53822981 53823033 -35681520 - MIR3 SINE MIR -6 202 151 2020 148 0 16 chr17 53823199 53823516 -35681037 + AluSx SINE Alu 1 312 0 2457 74 0 22 chr17 53823527 53823838 -35680715 + AluY SINE Alu 1 304 -7 1082 320 99 32 chr17 53823841 53824592 -35679961 + L2 LINE L2 2442 3261 -52 1426 134 58 5 chr17 53824593 53824816 -35679737 + AluJb SINE Alu 76 310 -2 2228 96 7 13 chr17 53824823 53825126 -35679427 + AluSq SINE Alu 1 301 -12 211 318 171 0 chr17 53825452 53825540 -35679013 - L2 LINE L2 -336 2977 2875 1808 172 3 3 chr17 53825540 53825837 -35678716 + AluJb SINE Alu 1 297 -15 1130 290 134 56 chr17 53826047 53826646 -35677907 + L2 LINE L2 2022 2573 -699 2242 65 7 52 chr17 53826646 53826954 -35677599 + AluSx SINE Alu 1 294 -18 2149 124 0 0 chr17 53826956 53827275 -35677278 + AluSp SINE Alu 1 313 0 1130 290 134 56 chr17 53827275 53827752 -35676801 + L2 LINE L2 2573 3194 -78 2262 92 0 0 chr17 53827752 53828074 -35676479 - AluSx SINE Alu 0 312 1 1130 290 134 56 chr17 53828074 53828160 -35676393 + L2 LINE L2 3194 3272 0 180 0 0 0 chr17 53829324 53829344 -35675209 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 750 208 69 0 chr17 53829347 53829491 -35675062 - AluJb SINE Alu -25 287 134 2268 116 0 3 chr17 53829505 53829815 -35674738 + AluSc SINE Alu 1 309 0 1547 58 0 62 chr17 53830272 53830496 -35674057 + AluY SINE Alu 99 308 -3 294 296 0 0 chr17 53830534 53830605 -35673948 - L2 LINE L2 -1 3271 3201 262 298 128 28 chr17 53830682 53830754 -35673799 + Charlie8 DNA MER1_type 4 67 -274 2090 148 3 3 chr17 53830754 53831065 -35673488 + AluSq SINE Alu 1 311 -2 262 298 128 28 chr17 53831065 53831133 -35673420 + Charlie8 DNA MER1_type 67 158 -183 2355 107 0 22 chr17 53831143 53831462 -35673091 + AluSx SINE Alu 1 312 0 2087 117 7 3 chr17 53831464 53831754 -35672799 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr17 53831801 53831823 -35672730 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr17 53831857 53831883 -35672670 + AT_rich Low_complexity Low_complexity 1 26 0 306 288 49 86 chr17 53832148 53832311 -35672242 + L2 LINE L2 3156 3312 -1 184 315 75 68 chr17 53832334 53832626 -35671927 - L2 LINE L2 -338 2976 2683 426 198 23 4 chr17 53832969 53833103 -35671450 - MER53 DNA DNA -2 187 1 351 0 0 0 chr17 53833373 53833412 -35671141 + (CA)n Simple_repeat Simple_repeat 2 40 0 2195 84 4 0 chr17 53834350 53834623 -35669930 - AluSq SINE Alu -12 301 28 240 333 92 8 chr17 53834730 53834850 -35669703 + L2 LINE L2 3138 3267 -5 884 159 8 0 chr17 53836024 53836156 -35668397 - FLAM_C SINE Alu -10 133 1 189 197 0 0 chr17 53836933 53836994 -35667559 + (TA)n Simple_repeat Simple_repeat 1 61 0 1360 221 4 18 chr17 53837041 53837322 -35667231 + AluJo SINE Alu 1 277 -35 1457 195 13 23 chr17 53837351 53837658 -35666895 - AluJb SINE Alu -8 304 1 1333 173 13 58 chr17 53837687 53837999 -35666554 + AluSp SINE Alu 1 298 -15 264 30 0 0 chr17 53838587 53838620 -35665933 + (CA)n Simple_repeat Simple_repeat 1 33 0 862 222 50 32 chr17 53839796 53840017 -35664536 + MIR SINE MIR 8 232 -30 313 297 69 10 chr17 53841159 53841260 -35663293 - L2 LINE L2 -8 3264 3158 180 0 0 0 chr17 53841355 53841375 -35663178 + (T)n Simple_repeat Simple_repeat 1 20 0 348 111 0 0 chr17 53841601 53841655 -35662898 + (A)n Simple_repeat Simple_repeat 1 54 0 348 269 28 64 chr17 53843747 53843888 -35660665 + MIR SINE MIR 57 192 -70 225 251 107 29 chr17 53844534 53844643 -35659910 + MIR SINE MIR 33 157 -59 573 332 58 0 chr17 53844645 53844886 -35659667 + MIR SINE MIR 2 256 -6 198 295 0 26 chr17 53847028 53847106 -35657447 + L3b LINE CR1 1319 1394 -189 2329 113 0 3 chr17 53847157 53847459 -35657094 + AluSx SINE Alu 1 301 -11 1030 132 0 93 chr17 53847537 53847741 -35656812 - MER20 DNA MER1_type -2 217 33 1212 182 0 34 chr17 53847797 53848033 -35656520 - AluJb SINE Alu -4 308 81 1848 151 3 40 chr17 53848164 53848488 -35656065 - AluJo SINE Alu 0 312 1 257 153 83 56 chr17 53848735 53848807 -35655746 - L1ME3A LINE L1 0 6170 6097 1704 154 14 20 chr17 53848817 53849110 -35655443 - AluJo SINE Alu -21 291 1 2092 132 0 13 chr17 53849641 53849945 -35654608 - AluSx SINE Alu -12 300 1 2171 102 3 10 chr17 53849958 53850251 -35654302 - AluSx SINE Alu -16 296 6 253 254 0 0 chr17 53852238 53852293 -35652260 + MIR SINE MIR 158 212 -50 281 270 105 75 chr17 53853157 53853357 -35651196 + L2 LINE L2 3024 3229 -84 2443 72 0 10 chr17 53853711 53854017 -35650536 + AluY SINE Alu 1 303 -8 2058 78 29 7 chr17 53854031 53854312 -35650241 + AluSc SINE Alu 7 293 -16 2336 70 11 0 chr17 53854315 53854601 -35649952 + AluSq SINE Alu 10 298 -15 2057 103 17 14 chr17 53856056 53856346 -35648207 - AluSg SINE Alu -19 291 1 1855 130 3 53 chr17 53857143 53857465 -35647088 + AluSx SINE Alu 1 306 -6 2106 114 47 3 chr17 53859907 53860235 -35644318 + AluSx SINE Alu 1 341 0 1456 281 103 2 chr17 53860647 53861063 -35643490 - L2 LINE L2 0 3313 2856 1504 203 148 48 chr17 53861068 53861526 -35643027 + MLT1D LTR MaLR 2 505 0 2302 89 3 3 chr17 53861572 53861864 -35642689 - AluSq SINE Alu -17 296 5 2076 143 6 13 chr17 53862116 53862430 -35642123 + AluJo SINE Alu 1 312 0 2207 110 0 26 chr17 53862542 53862851 -35641702 + AluSx SINE Alu 3 303 -9 2446 87 3 0 chr17 53864925 53865225 -35639328 - AluSc SINE Alu -8 301 1 190 315 55 55 chr17 53866370 53866516 -35638037 + L2 LINE L2 3164 3309 -4 187 220 100 0 chr17 53866745 53866795 -35637758 + L3b LINE CR1 1301 1355 -228 229 313 78 16 chr17 53866891 53866955 -35637598 + L3b LINE CR1 1505 1572 -11 2342 108 0 3 chr17 53867202 53867508 -35637045 - AluSx SINE Alu -7 305 1 1177 122 6 0 chr17 53867675 53867839 -35636714 + AluSq SINE Alu 131 295 -18 2218 107 20 3 chr17 53868818 53869118 -35635435 + AluSx SINE Alu 1 305 -7 2408 87 0 3 chr17 53869283 53869582 -35634971 + AluY SINE Alu 1 298 -13 2363 88 0 0 chr17 53869733 53870040 -35634513 + AluY SINE Alu 1 307 -4 2370 164 124 16 chr17 53870062 53870610 -35633943 + L1MB4 LINE L1 5574 6180 0 1603 94 10 0 chr17 53870621 53870823 -35633730 + AluSg/x SINE Alu 90 293 -19 435 314 69 11 chr17 53870864 53871052 -35633501 - L1ME4a LINE L1 -173 5948 5750 976 120 0 0 chr17 53871054 53871187 -35633366 - FLAM_C SINE Alu 0 133 1 261 232 62 0 chr17 53871352 53871464 -35633089 - L1ME4a LINE L1 -5 6116 5998 186 43 0 0 chr17 53871497 53871520 -35633033 + (TG)n Simple_repeat Simple_repeat 2 24 0 2261 83 42 3 chr17 53871679 53871967 -35632586 - AluY SINE Alu -12 299 1 190 298 69 23 chr17 53871999 53872130 -35632423 + L2 LINE L2 2804 2940 -332 199 331 25 41 chr17 53873185 53873306 -35631247 - MIR SINE MIR -131 131 13 23 54 0 0 chr17 53874224 53874261 -35630292 + AT_rich Low_complexity Low_complexity 1 37 0 2540 53 0 7 chr17 53875672 53875971 -35628582 - AluY SINE Alu -14 297 1 1602 148 9 88 chr17 53878736 53878870 -35625683 + AluJo SINE Alu 1 144 -168 2518 71 3 3 chr17 53878870 53879179 -35625374 + AluY SINE Alu 1 309 -2 1602 148 9 88 chr17 53879179 53879362 -35625191 + AluJo SINE Alu 144 293 -19 907 129 0 0 chr17 53879559 53879691 -35624862 + MER2 DNA MER2_type 1 132 -213 849 217 0 0 chr17 53879691 53879857 -35624696 - AluJo/FRAM SINE Alu -1 311 146 308 238 0 0 chr17 53879857 53879920 -35624633 - AluJb SINE Alu -117 185 123 1137 139 0 0 chr17 53880050 53880208 -35624345 + AluJb SINE Alu 145 302 -10 578 257 103 38 chr17 53880503 53881091 -35623462 + L1MC5 LINE L1 7096 7631 -330 322 195 50 178 chr17 53881174 53881472 -35623081 + L1MC4 LINE L1 7781 8040 -2 2464 72 3 7 chr17 53884470 53884774 -35619779 + AluSc SINE Alu 1 303 -6 392 318 9 0 chr17 53885057 53885164 -35619389 + MIR SINE MIR 45 152 -110 372 238 63 42 chr17 53885254 53885397 -35619156 - L1MC4 LINE L1 -1 8041 7896 254 254 14 0 chr17 53885397 53885468 -35619085 + (CA)n Simple_repeat Simple_repeat 2 73 0 2370 76 3 7 chr17 53885667 53885958 -35618595 + AluSq SINE Alu 1 290 -23 2254 116 7 0 chr17 53886172 53886474 -35618079 + AluSq SINE Alu 1 304 -9 2273 93 0 3 chr17 53886474 53886793 -35617760 + AluSc SINE Alu 1 309 0 2361 92 3 10 chr17 53886836 53887140 -35617413 + AluSg SINE Alu 1 302 -8 986 122 0 0 chr17 53887148 53887279 -35617274 + FLAM_C SINE Alu 1 131 -2 2214 127 3 0 chr17 53888038 53888337 -35616216 - AluSx SINE Alu -12 300 1 367 245 75 28 chr17 53888525 53888631 -35615922 + MIR SINE MIR 74 184 -78 1710 99 127 12 chr17 53888708 53888984 -35615569 + AluSg SINE Alu 1 305 0 522 86 0 0 chr17 53889482 53889552 -35615001 - Alu SINE Alu -14 298 229 2556 73 3 0 chr17 53889654 53889957 -35614596 + AluSp SINE Alu 2 305 -8 553 202 55 0 chr17 53891421 53891530 -35613023 + FRAM SINE Alu 57 171 -5 2168 144 0 3 chr17 53891530 53891843 -35612710 + AluSx SINE Alu 1 312 0 2149 108 3 10 chr17 53892943 53893238 -35611315 + AluSx SINE Alu 1 293 -19 2266 88 7 0 chr17 53893240 53893584 -35610969 + AluSg SINE Alu 1 310 0 1114 208 18 5 chr17 53895228 53895449 -35609104 - MER58A DNA MER1_type 0 224 1 894 167 157 10 chr17 53896328 53896532 -35608021 - MIR SINE MIR -11 251 18 363 78 0 0 chr17 53898020 53898071 -35606482 + (CA)n Simple_repeat Simple_repeat 2 52 0 232 200 0 94 chr17 53898663 53898748 -35605805 + C-rich Low_complexity Low_complexity 2 78 0 205 167 15 76 chr17 53898916 53898982 -35605571 + C-rich Low_complexity Low_complexity 5 66 0 190 340 57 9 chr17 53900728 53900834 -35603719 - MIR SINE MIR -45 217 107 396 303 96 27 chr17 53900920 53901108 -35603445 - MIR SINE MIR -2 260 60 610 259 44 49 chr17 53901227 53901432 -35603121 - MIR SINE MIR -44 218 15 330 281 47 55 chr17 53902263 53902391 -35602162 - L2 LINE L2 0 3272 3146 2240 103 7 3 chr17 53902519 53902819 -35601734 + AluSg1 SINE Alu 1 301 -8 2358 110 3 0 chr17 53903910 53904218 -35600335 + AluSx SINE Alu 1 309 -3 2426 48 0 24 chr17 53904313 53904638 -35599915 + AluY SINE Alu 1 318 0 362 319 57 13 chr17 53904699 53904856 -35599697 - MIR3 SINE MIR -25 183 20 2383 109 0 0 chr17 53904886 53905188 -35599365 + AluSg SINE Alu 1 302 -8 1616 176 28 63 chr17 53905196 53905518 -35599035 + L1MB8 LINE L1 5794 6126 -52 2176 126 0 0 chr17 53905518 53905819 -35598734 + AluJb SINE Alu 1 301 -11 2120 122 3 7 chr17 53905821 53906125 -35598428 + AluSx SINE Alu 1 303 -9 1616 176 28 63 chr17 53906125 53906197 -35598356 + L1MB8 LINE L1 6127 6177 -1 212 276 105 48 chr17 53906399 53906504 -35598049 + L2 LINE L2 3183 3293 -20 1654 203 3 3 chr17 53906906 53907201 -35597352 + AluJo SINE Alu 1 295 -17 1127 112 0 0 chr17 53907222 53907365 -35597188 + AluSg SINE Alu 1 143 -167 2193 100 7 3 chr17 53907366 53907657 -35596896 + AluY SINE Alu 1 292 -19 2284 93 3 13 chr17 53907786 53907920 -35596633 + AluSg SINE Alu 1 135 -175 2325 78 10 3 chr17 53907920 53908214 -35596339 + AluSg SINE Alu 1 296 -14 2284 93 3 13 chr17 53908214 53908389 -35596164 + AluSg SINE Alu 135 307 -3 2332 104 0 0 chr17 53908652 53908950 -35595603 - AluSp SINE Alu -15 298 1 1302 150 14 32 chr17 53909040 53909260 -35595293 - AluJb SINE Alu -14 298 83 2407 79 0 0 chr17 53909260 53909550 -35595003 - AluSg SINE Alu -16 294 5 634 188 0 90 chr17 53909712 53909897 -35594656 - MER69A DNA AcHobo -7 170 2 2072 105 4 0 chr17 53909917 53910183 -35594370 - AluSx SINE Alu -44 268 2 583 241 24 36 chr17 53911040 53911206 -35593347 - MIR SINE MIR -22 240 77 359 302 47 0 chr17 53913159 53913265 -35591288 - L2 LINE L2 -9 3263 3153 1064 284 47 45 chr17 53913575 53914121 -35590432 - L2 LINE L2 0 3313 2767 1457 150 40 20 chr17 53915315 53915568 -35588985 - AluSq SINE Alu -55 258 1 1945 119 47 0 chr17 53915736 53916013 -35588540 - AluSg SINE Alu -20 290 1 281 293 80 38 chr17 53916123 53916335 -35588218 + L1P2 LINE L1 5335 5555 -599 1939 151 7 3 chr17 53916592 53916890 -35587663 + AluJb SINE Alu 1 299 -13 2584 55 3 10 chr17 53916991 53917299 -35587254 + AluY SINE Alu 1 306 -5 2215 129 0 0 chr17 53917306 53917609 -35586944 + AluSx SINE Alu 2 304 -8 292 247 180 0 chr17 53917772 53917861 -35586692 + L2 LINE L2 3168 3272 0 249 373 52 20 chr17 53919162 53919414 -35585139 + L2 LINE L2 2563 2822 -492 271 330 27 94 chr17 53919458 53919788 -35584765 + L2 LINE L2 2914 3221 -51 657 244 41 50 chr17 53919965 53920130 -35584423 - MIR SINE MIR 0 262 98 1976 137 13 10 chr17 53920130 53920436 -35584117 + AluJo SINE Alu 1 307 -5 657 244 41 50 chr17 53920436 53920512 -35584041 - MIR SINE MIR -164 98 23 2364 92 3 0 chr17 53921392 53921697 -35582856 + AluSp SINE Alu 1 306 -7 1876 157 23 0 chr17 53921706 53922011 -35582542 + AluJb SINE Alu 1 312 0 203 328 147 9 chr17 53924553 53924669 -35579884 - L2 LINE L2 -8 3264 3133 2286 109 0 0 chr17 53925090 53925394 -35579159 - AluSq SINE Alu -9 304 1 524 269 67 10 chr17 53925450 53925643 -35578910 + MER46C DNA MER2_type 2 205 -133 2299 70 0 0 chr17 53926277 53926550 -35578003 + AluSq SINE Alu 1 273 -40 210 37 0 0 chr17 53927193 53927220 -35577333 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1811 160 12 168 chr17 53927304 53927713 -35576840 + MER47B DNA MER2_type 1 321 -2002 1891 169 0 10 chr17 53927713 53928014 -35576539 - AluJo SINE Alu -14 298 1 1811 160 12 168 chr17 53928014 53928099 -35576454 + MER47B DNA MER2_type 321 418 0 2293 98 7 0 chr17 53928475 53928772 -35575781 - AluSc SINE Alu -10 299 1 322 324 44 67 chr17 53928970 53929190 -35575363 - L2 LINE L2 -32 3240 3028 2234 114 0 0 chr17 53929190 53929487 -35575066 - AluSx SINE Alu -15 297 1 322 324 44 67 chr17 53929487 53929581 -35574972 - L2 LINE L2 -244 3028 2933 22 0 0 0 chr17 53929909 53929931 -35574622 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr17 53929999 53930031 -35574522 + AT_rich Low_complexity Low_complexity 1 32 0 972 123 26 0 chr17 53930035 53930189 -35574364 + L1MA6 LINE L1 6137 6294 -6 624 283 53 29 chr17 53931222 53931466 -35573087 - MIR SINE MIR -10 252 3 25 31 0 0 chr17 53931497 53931529 -35573024 + AT_rich Low_complexity Low_complexity 1 32 0 2569 75 0 0 chr17 53931957 53932264 -35572289 - AluY SINE Alu -4 307 1 866 220 153 34 chr17 53932458 53932753 -35571800 + MER102a DNA MER1_type 1 330 0 2132 109 14 0 chr17 53934278 53934563 -35569990 - AluSg SINE Alu -8 302 14 1418 193 3 42 chr17 53934563 53934869 -35569684 - AluJo SINE Alu -16 296 3 2656 43 0 0 chr17 53934912 53935212 -35569341 - AluY SINE Alu -11 300 1 876 287 116 48 chr17 53935523 53935997 -35568556 - L2 LINE L2 -2 3311 2806 1432 156 12 16 chr17 53936083 53936327 -35568226 - AluSx SINE Alu -9 303 61 2197 120 0 0 chr17 53936400 53936691 -35567862 - AluJb SINE Alu -21 291 1 459 310 41 0 chr17 53936991 53937188 -35567365 - L1MC/D LINE L1 -1989 5819 5615 2206 81 10 17 chr17 53937289 53937586 -35566967 + AluSq SINE Alu 3 297 -16 1559 203 7 14 chr17 53937641 53937932 -35566621 - AluJb SINE Alu -23 289 1 1961 130 49 11 chr17 53938015 53938300 -35566253 - AluSx SINE Alu -16 296 1 2546 69 0 0 chr17 53938320 53938626 -35565927 - AluY SINE Alu -5 306 1 2647 50 0 0 chr17 53939000 53939301 -35565252 + AluY SINE Alu 1 301 -10 1651 151 12 0 chr17 53939407 53939658 -35564895 + AluJo SINE Alu 12 265 -47 569 233 83 0 chr17 53940360 53940493 -35564060 - L2 LINE L2 -2 3311 3168 891 281 80 45 chr17 53941898 53942834 -35561719 - L2 LINE L2 -8 3305 2283 193 274 29 69 chr17 53942839 53942941 -35561612 - MIR SINE MIR -63 145 48 2186 125 13 0 chr17 53942941 53943245 -35561308 - AluSx SINE Alu -4 308 1 2406 102 0 3 chr17 53943264 53943577 -35560976 - AluSx SINE Alu 0 312 1 273 57 0 0 chr17 53944240 53944275 -35560278 + (TAG)n Simple_repeat Simple_repeat 2 36 0 378 324 132 10 chr17 53944841 53945045 -35559508 + MIR SINE MIR 29 257 -5 2221 122 0 0 chr17 53945086 53945382 -35559171 - AluSq SINE Alu -17 296 1 1087 151 0 0 chr17 53945670 53945829 -35558724 + AluJb SINE Alu 129 287 -25 2161 112 7 0 chr17 53945952 53946246 -35558307 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 53946631 53946652 -35557901 + AT_rich Low_complexity Low_complexity 1 21 0 2317 86 41 0 chr17 53947075 53947365 -35557188 - AluSx SINE Alu -10 302 1 239 176 113 78 chr17 53947394 53947527 -35557026 - L1ME4a LINE L1 -11 6110 5970 2293 86 3 45 chr17 53947527 53947841 -35556712 - AluSg SINE Alu -9 301 1 2085 119 33 36 chr17 53947853 53948215 -35556338 - L1PA16 LINE L1 0 6166 5806 1615 171 53 41 chr17 53948366 53948705 -35555848 - MER2 DNA MER2_type -1 343 1 2077 120 0 58 chr17 53948707 53949032 -35555521 - AluSx SINE Alu -6 306 1 276 284 182 7 chr17 53949278 53949426 -35555127 - MIR SINE MIR -16 246 73 1056 142 13 0 chr17 53951656 53951811 -35552742 - AluJb SINE Alu -16 296 140 1814 151 36 0 chr17 53952320 53952599 -35551954 - AluSx SINE Alu -19 293 5 2356 102 0 3 chr17 53953574 53953877 -35550676 - AluSc SINE Alu -7 302 1 1588 145 78 39 chr17 53954815 53955097 -35549456 + AluJo SINE Alu 1 293 -19 2214 96 31 0 chr17 53955129 53955421 -35549132 - AluSx SINE Alu -11 301 1 249 33 0 0 chr17 53955590 53955620 -35548933 + (T)n Simple_repeat Simple_repeat 1 30 0 21 0 0 0 chr17 53956754 53956775 -35547778 + AT_rich Low_complexity Low_complexity 1 21 0 1991 134 0 10 chr17 53957074 53957373 -35547180 - AluSx SINE Alu -16 296 1 592 132 9 0 chr17 53957394 53957500 -35547053 - L1MB7 LINE L1 -1 6183 6077 289 215 0 23 chr17 53957571 53957674 -35546879 - L1MB7 LINE L1 -216 5962 5865 202 370 37 0 chr17 53958161 53958269 -35546284 + L2 LINE L2 3160 3271 -1 2202 193 134 14 chr17 53958531 53959107 -35545446 - MER82 DNA MER2_type -8 645 1 2063 102 0 3 chr17 53959194 53959503 -35545050 - AluSp SINE Alu 0 308 1 292 213 21 64 chr17 53959633 53959727 -35544826 - L1MC5 LINE L1 -78 7883 7794 414 278 155 37 chr17 53959737 53960143 -35544410 - L1MC5 LINE L1 -239 7722 7269 2034 145 46 3 chr17 53960309 53960634 -35543919 + MER44D DNA MER2_type 1 609 0 2145 106 10 0 chr17 53964728 53965020 -35539533 - AluSx SINE Alu -17 295 1 1893 146 19 7 chr17 53965022 53965330 -35539223 - AluSx SINE Alu 0 312 1 29 28 0 0 chr17 53965763 53965799 -35538754 + AT_rich Low_complexity Low_complexity 1 36 0 1606 152 22 7 chr17 53965862 53966132 -35538421 + AluJb SINE Alu 21 294 -18 2043 129 7 0 chr17 53966299 53966601 -35537952 - AluSx SINE Alu -8 304 1 770 231 43 0 chr17 53966974 53967160 -35537393 - MIR SINE MIR -5 257 64 180 0 0 0 chr17 53967163 53967183 -35537370 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2070 141 0 0 chr17 53967198 53967510 -35537043 + AluSx SINE Alu 1 312 0 857 452 7 21 chr17 53967510 53967789 -35536764 - AluJo SINE Alu -36 276 2 2137 118 0 0 chr17 53967791 53968087 -35536466 - AluSx SINE Alu -16 296 1 294 273 105 53 chr17 53969231 53969698 -35534855 + MLT1H LTR MaLR 1 542 0 1667 155 14 3 chr17 53969993 53970277 -35534276 - AluJb SINE Alu -25 287 1 396 232 28 122 chr17 53970546 53970611 -35533942 + MER103 DNA DNA 1 71 -95 1520 149 28 0 chr17 53970611 53970859 -35533694 + AluJo SINE Alu 51 305 -7 396 232 28 122 chr17 53970859 53970974 -35533579 + MER103 DNA DNA 71 164 -2 553 324 127 25 chr17 53971377 53971889 -35532664 - L2 LINE L2 -421 2893 2330 230 370 130 38 chr17 53972015 53972331 -35532222 - L2 LINE L2 -31 3241 2897 215 357 43 36 chr17 53972363 53972503 -35532050 + L2 LINE L2 3124 3264 -8 1834 106 12 0 chr17 53973012 53973266 -35531287 - AluSg SINE Alu -53 257 1 236 213 0 0 chr17 53974091 53974138 -35530415 - L2 LINE L2 -3 3310 3264 368 290 28 0 chr17 53974728 53974830 -35529723 + MIR SINE MIR 8 116 -92 224 234 0 0 chr17 53975771 53975818 -35528735 + (CTAGGG)n Simple_repeat Simple_repeat 6 52 0 181 300 64 82 chr17 53975946 53976166 -35528387 - L2 LINE L2 -13 3259 3044 2304 87 3 0 chr17 53976292 53976592 -35527961 - AluSq SINE Alu -8 305 5 1688 134 52 21 chr17 53976681 53976971 -35527582 - AluSx SINE Alu -5 307 9 198 0 0 0 chr17 53977038 53977060 -35527493 + (T)n Simple_repeat Simple_repeat 1 22 0 319 235 159 23 chr17 53977547 53977679 -35526874 + MIR SINE MIR 2 151 -111 2053 57 15 4 chr17 53977693 53977955 -35526598 - AluY SINE Alu -4 307 43 411 89 0 0 chr17 53978043 53978099 -35526454 + Alu SINE Alu 2 57 -253 1342 157 0 13 chr17 53978213 53978448 -35526105 + AluJo SINE Alu 81 312 0 239 241 17 0 chr17 53978523 53978581 -35525972 - L2 LINE L2 -14 3299 3241 805 240 19 34 chr17 53979549 53979757 -35524796 - MIR SINE MIR -22 240 36 535 200 159 18 chr17 53979899 53980069 -35524484 + MIR SINE MIR 36 229 -33 1687 166 7 32 chr17 53980590 53980898 -35523655 - AluJo SINE Alu -4 308 9 2187 105 3 0 chr17 53982216 53982510 -35522043 + AluSq SINE Alu 1 295 -18 186 133 0 0 chr17 53982664 53982694 -35521859 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 216 0 0 0 chr17 53982694 53982718 -35521835 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 2158 131 0 0 chr17 53982726 53983038 -35521515 + AluJb SINE Alu 1 312 0 262 250 0 0 chr17 53983974 53984030 -35520523 + GA-rich Low_complexity Low_complexity 2 57 0 269 378 0 6 chr17 53984258 53984438 -35520115 + (CA)n Simple_repeat Simple_repeat 1 179 0 187 152 0 0 chr17 53984830 53984863 -35519690 + MIR SINE MIR 116 148 -114 279 304 24 8 chr17 53985717 53985842 -35518711 + GA-rich Low_complexity Low_complexity 2 128 0 559 0 28 0 chr17 53985842 53985913 -35518640 + (GA)n Simple_repeat Simple_repeat 2 74 0 256 291 27 27 chr17 53986678 53986788 -35517765 - L3b LINE CR1 -131 1452 1343 632 315 70 5 chr17 53987017 53987230 -35517323 + MIR SINE MIR 35 261 -1 501 202 12 6 chr17 53987500 53987668 -35516885 + (TCCA)n Simple_repeat Simple_repeat 2 170 0 389 316 18 18 chr17 53987672 53987843 -35516710 + (CCCA)n Simple_repeat Simple_repeat 4 174 0 267 313 10 21 chr17 53987965 53988061 -35516492 + L3b LINE CR1 1274 1368 -215 466 308 54 22 chr17 53988393 53988578 -35515975 + MIR SINE MIR 36 226 -36 414 0 0 0 chr17 53989134 53989180 -35515373 + (CA)n Simple_repeat Simple_repeat 2 47 0 837 189 0 67 chr17 53990918 53990954 -35513599 - AluJo/FRAM SINE Alu -9 303 266 2158 97 0 23 chr17 53990954 53991254 -35513299 + AluSg SINE Alu 1 293 -17 837 189 0 67 chr17 53991254 53991397 -35513156 - AluJo/FRAM SINE Alu -46 266 136 559 238 40 26 chr17 53991410 53991561 -35512992 + MIR SINE MIR 110 262 0 2456 71 6 0 chr17 53992607 53992918 -35511635 - AluSp SINE Alu 0 313 1 712 154 0 0 chr17 53993050 53993160 -35511393 - FLAM_C SINE Alu -32 111 2 1066 263 63 125 chr17 53993161 53993341 -35511212 - Zaphod DNA AcHobo -3258 773 583 2187 95 0 3 chr17 53993341 53993635 -35510918 + AluSg SINE Alu 1 293 -17 1066 263 63 125 chr17 53993635 53994278 -35510275 - Zaphod DNA AcHobo -3448 583 1 246 310 110 19 chr17 53994281 53994436 -35510117 - L2 LINE L2 -568 2746 2578 783 204 40 10 chr17 53996742 53996804 -35507749 + L1MD3 LINE L1 7776 7835 -160 2077 128 0 3 chr17 53996804 53997100 -35507453 - AluJo SINE Alu -17 295 1 783 204 40 10 chr17 53997100 53997238 -35507315 + L1MD3 LINE L1 7835 7982 -13 383 304 55 50 chr17 53997822 53998023 -35506530 + MIR SINE MIR 21 222 -40 334 306 20 0 chr17 54000279 54000377 -35504176 + MIR SINE MIR 36 135 -73 183 293 50 40 chr17 54001921 54002020 -35502533 - L3b LINE CR1 -201 1382 1283 274 200 48 95 chr17 54002220 54002325 -35502228 + MIR SINE MIR 49 148 -60 244 262 16 0 chr17 54002980 54003041 -35501512 + MIR SINE MIR 93 154 -108 207 0 0 0 chr17 54004288 54004311 -35500242 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 324 287 23 0 chr17 54004312 54004399 -35500154 - L2 LINE L2 -13 3300 3212 941 206 37 82 chr17 54005187 54005541 -35499012 + L1MC4 LINE L1 7694 8031 -11 216 97 0 0 chr17 54005722 54005753 -35498800 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 369 282 22 7 chr17 54007025 54007161 -35497392 + MIR SINE MIR 35 171 -66 2250 99 0 7 chr17 54007380 54007684 -35496869 - AluSx SINE Alu -10 302 1 441 274 110 6 chr17 54007929 54008093 -35496460 - MIR SINE MIR -54 208 28 191 189 0 75 chr17 54008687 54008740 -35495813 - MIR SINE MIR -145 117 69 215 98 0 49 chr17 54008780 54008821 -35495732 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 1028 265 119 9 chr17 54008951 54009430 -35495123 + L2 LINE L2 2754 3299 -14 180 0 0 0 chr17 54009433 54009453 -35495100 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 538 270 50 0 chr17 54010096 54010255 -35494298 - MIR3 SINE MIR -9 199 33 241 231 0 15 chr17 54010614 54010679 -35493874 + G-rich Low_complexity Low_complexity 4 67 0 744 164 30 22 chr17 54011339 54011473 -35493080 - AluJo SINE Alu -177 135 1 2365 93 3 0 chr17 54011497 54011807 -35492746 + AluSp SINE Alu 1 311 -2 239 279 39 48 chr17 54011927 54012031 -35492522 + MIR SINE MIR 71 173 -89 1982 122 6 22 chr17 54012157 54012468 -35492085 + AluSx SINE Alu 5 310 -2 194 390 15 46 chr17 54012594 54012853 -35491700 - L2 LINE L2 -428 2886 2636 1835 150 37 3 chr17 54013386 54013686 -35490867 + AluJo SINE Alu 1 310 -2 1980 118 16 33 chr17 54013692 54013998 -35490555 + AluSx SINE Alu 1 301 -11 644 286 109 18 chr17 54014312 54014532 -35490021 + MIR SINE MIR 20 259 -3 2243 94 0 0 chr17 54015110 54015438 -35489115 - AluSx SINE Alu 0 312 1 185 297 54 14 chr17 54015988 54016062 -35488491 - MIR SINE MIR -105 157 81 441 0 0 0 chr17 54016578 54016627 -35487926 + (TG)n Simple_repeat Simple_repeat 2 50 0 216 317 0 0 chr17 54016755 54016815 -35487738 + (TG)n Simple_repeat Simple_repeat 1 60 0 391 270 113 81 chr17 54017123 54017165 -35487388 - L1ME4a LINE L1 -12 6109 6070 1754 102 41 55 chr17 54017165 54017458 -35487095 + AluSq SINE Alu 4 292 -21 391 270 113 81 chr17 54017458 54017637 -35486916 - L1ME4a LINE L1 -51 6070 5881 293 377 33 14 chr17 54017669 54017884 -35486669 - L1ME4a LINE L1 -299 5822 5604 483 18 0 0 chr17 54018141 54018197 -35486356 + (TG)n Simple_repeat Simple_repeat 2 57 0 185 236 0 55 chr17 54019143 54019198 -35485355 - MIR SINE MIR -196 66 15 231 229 0 0 chr17 54019806 54019854 -35484699 + L2 LINE L2 3209 3256 -16 2296 106 0 10 chr17 54020086 54020398 -35484155 - AluSc SINE Alu 0 309 1 1129 142 0 0 chr17 54020398 54020560 -35483993 - AluJo/FRAM SINE Alu -7 305 144 402 214 0 0 chr17 54020560 54020630 -35483923 - AluJ/FLAM SINE Alu -239 73 4 1798 147 45 7 chr17 54020632 54020800 -35483753 - AluJo SINE Alu -9 303 118 192 77 0 0 chr17 54020800 54020826 -35483727 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1798 147 45 7 chr17 54020826 54020949 -35483604 - AluJo SINE Alu -194 118 1 198 242 182 83 chr17 54020989 54021121 -35483432 - MER5A DNA MER1_type -37 152 8 2101 113 0 10 chr17 54021962 54022264 -35482289 + AluSx SINE Alu 1 299 -13 251 351 32 0 chr17 54022930 54023024 -35481529 + L2 LINE L2 3176 3272 -41 663 168 30 8 chr17 54023664 54023795 -35480758 - MIR SINE MIR -12 250 117 807 167 0 0 chr17 54023827 54023969 -35480584 - FLAM_C SINE Alu 0 142 1 2338 91 13 0 chr17 54024216 54024524 -35480029 + AluSx SINE Alu 1 312 0 239 274 126 0 chr17 54026346 54026441 -35478112 + MIR SINE MIR 86 192 -70 224 302 23 12 chr17 54027208 54027294 -35477259 - MIR SINE MIR 0 262 176 307 173 0 99 chr17 54027306 54027387 -35477166 - L2 LINE L2 0 3313 3241 402 147 0 0 chr17 54027395 54027463 -35477090 + (CA)n Simple_repeat Simple_repeat 2 69 0 945 244 136 23 chr17 54027463 54027816 -35476737 - L2 LINE L2 -79 3234 2842 339 222 0 0 chr17 54027846 54027918 -35476635 - MIR SINE MIR -89 173 102 279 0 0 0 chr17 54027981 54028012 -35476541 + (TG)n Simple_repeat Simple_repeat 2 32 0 1810 163 3 31 chr17 54028122 54028522 -35476031 + AluJb SINE Alu 1 391 0 243 262 215 9 chr17 54028549 54028656 -35475897 + L2 LINE L2 3143 3271 -1 255 221 44 29 chr17 54028736 54028804 -35475749 - MIR3 SINE MIR -28 180 112 1903 146 0 0 chr17 54029291 54029566 -35474987 - AluJb SINE Alu -20 292 18 705 184 6 48 chr17 54030571 54030594 -35473959 - MIR SINE MIR 0 262 240 1735 171 0 39 chr17 54030594 54030904 -35473649 - AluJo SINE Alu -14 298 1 705 184 6 48 chr17 54030904 54031048 -35473505 - MIR SINE MIR -22 240 102 228 67 0 0 chr17 54031135 54031165 -35473388 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 460 246 74 112 chr17 54031171 54031386 -35473167 - MIR SINE MIR -13 249 43 1835 168 7 0 chr17 54031666 54031957 -35472596 - AluJo SINE Alu -17 295 3 21 0 0 0 chr17 54031961 54031982 -35472571 + AT_rich Low_complexity Low_complexity 1 21 0 312 295 197 0 chr17 54032555 54032748 -35471805 + MER115 DNA AcHobo 18 248 -445 534 217 9 0 chr17 54034826 54034932 -35469621 + MER81 DNA DNA 8 114 0 233 244 26 13 chr17 54035272 54035350 -35469203 - MIR SINE MIR -65 197 119 198 277 235 17 chr17 54035324 54035443 -35469110 - MIR3 SINE MIR -63 145 1 * 2034 116 11 0 chr17 54035916 54036193 -35468360 + AluSx SINE Alu 1 280 -32 186 43 0 0 chr17 54036194 54036217 -35468336 + (CAA)n Simple_repeat Simple_repeat 2 24 0 50 59 0 0 chr17 54037154 54037239 -35467314 + GC_rich Low_complexity Low_complexity 1 85 0 1528 124 18 62 chr17 54037761 54038034 -35466519 + AluJo SINE Alu 11 271 -41 513 345 70 62 chr17 54039295 54039765 -35464788 + L2 LINE L2 2410 2883 -431 222 319 44 35 chr17 54040164 54040277 -35464276 + L2 LINE L2 3147 3260 -12 2734 13 0 0 chr17 54041123 54041428 -35463125 + AluYa5 SINE Alu 1 305 -6 250 277 109 76 chr17 54041980 54042099 -35462454 - MIR SINE MIR -38 224 102 429 229 160 7 chr17 54043103 54043247 -35461306 + MIR3 SINE MIR 18 183 -25 186 319 191 0 chr17 54043652 54043746 -35460807 + L2 LINE L2 3202 3313 0 306 206 0 0 chr17 54044119 54044192 -35460361 + (CA)n Simple_repeat Simple_repeat 2 74 0 402 252 0 0 chr17 54044221 54044368 -35460185 + (CA)n Simple_repeat Simple_repeat 1 147 0 214 352 14 14 chr17 54045184 54045255 -35459298 - L2 LINE L2 -89 3183 3113 328 243 147 21 chr17 54045946 54046111 -35458442 + MIR SINE MIR 34 221 -41 217 269 13 26 chr17 54046883 54046961 -35457592 + GA-rich Low_complexity Low_complexity 3 79 0 * 269 242 0 16 chr17 54046908 54046970 -35457583 + G-rich Low_complexity Low_complexity 3 63 0 291 252 126 70 chr17 54048668 54048811 -35455742 - MIR SINE MIR -55 153 3 702 128 0 0 chr17 54048984 54049101 -35455452 + (GGA)n Simple_repeat Simple_repeat 1 117 0 682 239 37 5 chr17 54050095 54050296 -35454257 + MIR SINE MIR 51 262 0 212 256 0 0 chr17 54051195 54051238 -35453315 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 317 379 15 20 chr17 54051265 54051468 -35453085 + L3 LINE CR1 1369 1570 -7 194 390 15 46 chr17 54051629 54051888 -35452665 + L2 LINE L2 2636 2886 -428 249 266 53 64 chr17 54051991 54052014 -35452539 + L2 LINE L2 3204 3226 -87 2026 123 6 22 chr17 54052014 54052331 -35452222 - AluSx SINE Alu 0 312 1 249 266 53 64 chr17 54052331 54052401 -35452152 + L2 LINE L2 3226 3296 -17 282 323 100 39 chr17 54052424 54052653 -35451900 + L2 LINE L2 2949 3191 -81 1631 158 27 7 chr17 54052862 54053154 -35451399 + AluJo SINE Alu 11 308 -4 21 36 0 0 chr17 54053219 54053247 -35451306 + AT_rich Low_complexity Low_complexity 1 28 0 2209 117 0 0 chr17 54053309 54053608 -35450945 + AluSg SINE Alu 3 301 -9 2273 88 14 0 chr17 54053617 54053911 -35450642 + AluSx SINE Alu 1 298 -14 235 229 14 0 chr17 54053963 54054029 -35450524 + MER115 DNA AcHobo 638 688 -5 272 186 0 0 chr17 54055912 54055955 -35448598 - L2 LINE L2 -16 3256 3214 427 290 55 28 chr17 54056006 54056151 -35448402 - MIR3 SINE MIR -39 169 21 248 257 40 0 chr17 54056631 54056705 -35447848 - MIR SINE MIR -98 164 88 713 179 0 8 chr17 54057067 54057190 -35447363 + FLAM_A SINE Alu 1 122 -11 254 256 88 48 chr17 54057237 54057362 -35447191 - L2 LINE L2 -2 3270 3141 519 271 6 35 chr17 54057403 54057573 -35446980 - L2 LINE L2 -36 3277 3113 270 274 121 45 chr17 54058098 54058255 -35446298 + L3 LINE CR1 1382 1550 -27 217 298 36 48 chr17 54058311 54058479 -35446074 - L2 LINE L2 -528 2786 2621 213 94 0 0 chr17 54058882 54058914 -35445639 + (TG)n Simple_repeat Simple_repeat 2 33 0 2012 142 0 26 chr17 54059020 54059329 -35445224 - AluJo SINE Alu -11 301 1 2367 82 0 10 chr17 54060308 54060611 -35443942 + AluSx SINE Alu 7 306 -6 2463 53 0 20 chr17 54060611 54060911 -35443642 + AluY SINE Alu 1 294 -17 339 281 11 0 chr17 54061011 54061100 -35443453 - L3 LINE CR1 -108 1469 1380 630 296 122 58 chr17 54063139 54063368 -35441185 + L2 LINE L2 2683 2896 -417 2201 89 0 4 chr17 54063368 54063648 -35440905 - AluSg SINE Alu -31 279 1 630 296 122 58 chr17 54063648 54064007 -35440546 + L2 LINE L2 2896 3310 -3 470 273 107 19 chr17 54064799 54065004 -35439549 + MIR SINE MIR 28 250 -12 624 262 75 0 chr17 54065617 54065804 -35438749 - MIR SINE MIR -16 246 46 2386 64 0 0 chr17 54066160 54066468 -35438085 + AluY SINE Alu 1 308 0 233 191 70 61 chr17 54066907 54066993 -35437560 - MIR SINE MIR -89 173 88 209 258 0 0 chr17 54068926 54068988 -35435565 + (CA)n Simple_repeat Simple_repeat 1 62 0 213 197 148 33 chr17 54069370 54069431 -35435122 - L2 LINE L2 0 3272 3205 211 200 17 50 chr17 54069398 54069458 -35435095 - L2 LINE L2 -35 3278 3221 * 2080 129 0 32 chr17 54069922 54070233 -35434320 - AluSg SINE Alu -9 301 1 40 37 0 0 chr17 54070240 54070294 -35434259 + AT_rich Low_complexity Low_complexity 1 54 0 775 172 0 15 chr17 54070294 54070428 -35434125 - FLAM_C SINE Alu -1 132 1 183 222 63 32 chr17 54070967 54071016 -35433537 - MIR3 SINE MIR -5 203 150 2556 63 3 0 chr17 54071016 54071315 -35433238 - AluSp SINE Alu -13 300 1 183 222 63 32 chr17 54071315 54071328 -35433225 - MIR3 SINE MIR -58 150 139 592 299 91 0 chr17 54071394 54071591 -35432962 - MIR SINE MIR -32 230 16 204 197 28 28 chr17 54071590 54071661 -35432892 - L3 LINE CR1 -76 1501 1431 * 248 207 17 0 chr17 54071830 54071888 -35432665 - L3 LINE CR1 -165 1412 1354 548 279 18 18 chr17 54072152 54072317 -35432236 + MIR SINE MIR 28 192 -70 501 224 133 0 chr17 54072716 54072859 -35431694 - MIR SINE MIR -69 193 32 1370 178 17 92 chr17 54072994 54073353 -35431200 + L1MB7 LINE L1 5786 6117 -67 2177 118 3 22 chr17 54073353 54073667 -35430886 + AluSg SINE Alu 1 308 -2 991 135 40 0 chr17 54073690 54073838 -35430715 - FRAM SINE Alu -19 157 4 1279 130 0 0 chr17 54073839 54074046 -35430507 + L1P LINE L1 4474 4680 -1466 1859 164 17 10 chr17 54074294 54074593 -35429960 - AluSx SINE Alu -11 301 1 743 208 27 18 chr17 54074828 54075013 -35429540 - MER70B LTR ERVL 0 476 320 2371 131 62 17 chr17 54075015 54075383 -35429170 + MSTB LTR MaLR 1 390 -36 2449 80 0 3 chr17 54075383 54075683 -35428870 - AluY SINE Alu -11 300 2 2371 131 62 17 chr17 54075683 54075720 -35428833 + MSTB LTR MaLR 390 424 -2 8748 171 38 3 chr17 54075720 54077242 -35427311 + MSTB-int LTR MaLR 1 1576 -75 1792 160 35 20 chr17 54077242 54077607 -35426946 + MSTB LTR MaLR 68 425 -3 2303 99 0 30 chr17 54077607 54077910 -35426643 + AluY SINE Alu 1 294 -17 1218 228 16 8 chr17 54077921 54078167 -35426386 - MER70A LTR ERVL -148 324 77 2244 116 7 0 chr17 54078795 54079088 -35425465 + AluSx SINE Alu 3 297 -15 1696 179 21 3 chr17 54079445 54079736 -35424817 + AluJb SINE Alu 1 296 -16 2292 88 0 14 chr17 54079856 54080153 -35424400 + AluSc SINE Alu 1 293 -16 2277 99 7 10 chr17 54080219 54080522 -35424031 + AluSx SINE Alu 1 302 -10 239 345 124 62 chr17 54080949 54081224 -35423329 - MLT1K LTR MaLR -259 329 38 397 313 99 31 chr17 54081344 54081736 -35422817 + L2 LINE L2 2094 3246 -26 333 0 0 0 chr17 54082281 54082318 -35422235 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 308 298 73 0 chr17 54082421 54082545 -35422008 + L2 LINE L2 3181 3313 0 571 190 374 0 chr17 54082562 54082725 -35421828 - MER58A DNA MER1_type 0 224 1 611 120 0 0 chr17 54083367 54083459 -35421094 - AluSc SINE Alu -200 109 18 1023 164 6 12 chr17 54083486 54083676 -35420877 + AluJb SINE Alu 135 312 0 274 231 209 0 chr17 54083725 54083816 -35420737 + L1M4c LINE L1 292 401 -6245 2696 205 61 61 chr17 54083876 54084427 -35420126 + L1M4c LINE L1 829 1379 -5163 2182 105 40 3 chr17 54084427 54084723 -35419830 + AluSg SINE Alu 2 308 -2 2696 205 61 61 chr17 54084723 54084823 -35419730 + L1M4c LINE L1 1379 1478 -5064 2389 108 0 0 chr17 54084823 54085119 -35419434 + AluSc SINE Alu 4 299 -10 2696 205 61 61 chr17 54085119 54085338 -35419215 + L1M4c LINE L1 1477 1700 -4842 1329 259 30 37 chr17 54085338 54085947 -35418606 + L2 LINE L2 2701 3313 0 2664 238 105 93 chr17 54086050 54086782 -35417771 - L1ME3A LINE L1 -280 5890 5168 2248 131 0 0 chr17 54086782 54087080 -35417473 - AluSq SINE Alu -15 298 1 2664 238 105 93 chr17 54087080 54087165 -35417388 - L1ME3A LINE L1 -1002 5168 5086 2136 141 3 6 chr17 54087165 54087478 -35417075 - AluSx SINE Alu 0 312 1 2664 238 105 93 chr17 54087478 54087922 -35416631 - L1ME3A LINE L1 -1084 5086 4649 2428 89 0 0 chr17 54087922 54088226 -35416327 - AluY SINE Alu -7 304 1 2664 238 105 93 chr17 54088226 54088845 -35415708 - L1ME3A LINE L1 -1521 4649 4039 2113 117 24 3 chr17 54088845 54089136 -35415417 - AluSq SINE Alu -16 297 1 2664 238 105 93 chr17 54089136 54089284 -35415269 - L1ME3A LINE L1 -2131 4039 3894 748 183 15 0 chr17 54089284 54089415 -35415138 - FLAM_A SINE Alu 0 133 1 2664 238 105 93 chr17 54089415 54089709 -35414844 - L1ME3A LINE L1 -2276 3894 3440 2150 94 40 13 chr17 54089712 54090010 -35414543 - AluSq SINE Alu -7 306 1 1546 209 45 3 chr17 54090222 54090339 -35414214 + AluJo SINE Alu 1 112 -200 351 0 0 0 chr17 54090339 54090378 -35414175 + (CA)n Simple_repeat Simple_repeat 2 40 0 1546 209 45 3 chr17 54090378 54090552 -35414001 + AluJo SINE Alu 112 304 -8 305 143 29 29 chr17 54090741 54090752 -35413801 - L1MC2 LINE L1 -3 6341 6331 2517 77 0 6 chr17 54090752 54091065 -35413488 - AluY SINE Alu 0 311 1 305 143 29 29 chr17 54091065 54091123 -35413430 - L1MC2 LINE L1 -12 6332 6272 301 337 36 0 chr17 54091244 54091327 -35413226 - L1MC4 LINE L1 -1339 6703 6618 300 367 0 11 chr17 54091253 54091343 -35413210 + L1MC4 LINE L1 6615 6703 -1339 * 358 276 12 6 chr17 54091352 54091515 -35413038 + (CATG)n Simple_repeat Simple_repeat 1 164 0 533 221 17 17 chr17 54091565 54091861 -35412692 + (CATG)n Simple_repeat Simple_repeat 1 296 0 322 353 0 0 chr17 54091960 54092045 -35412508 - L1MC4 LINE L1 -1344 6698 6614 * 360 223 0 10 chr17 54091967 54092054 -35412499 + L1MC4 LINE L1 1995 6983 -1339 269 211 0 0 chr17 54092118 54092170 -35412383 - FLAM SINE Alu -4 129 78 1420 149 0 9 chr17 54092170 54092384 -35412169 - AluSx SINE Alu -100 212 1 268 185 0 19 chr17 54092384 54092438 -35412115 + MLT2B2 LTR ERVL 2 54 -461 236 229 48 48 chr17 54092517 54092600 -35411953 - MLT1J LTR MaLR -428 83 1 260 273 0 0 chr17 54092806 54092872 -35411681 - MIR SINE MIR -60 148 83 217 188 42 0 chr17 54093571 54093619 -35410934 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 348 233 50 33 chr17 54094267 54094387 -35410166 + L2 LINE L2 3172 3293 -20 356 266 11 0 chr17 54095822 54095916 -35408637 + MIR SINE MIR 30 124 -84 832 177 0 43 chr17 54096085 54096096 -35408457 - FRAM SINE Alu -136 40 30 2384 92 0 16 chr17 54096096 54096411 -35408142 - AluSg SINE Alu 0 310 1 832 177 0 43 chr17 54096411 54096563 -35407990 - FRAM SINE Alu -146 30 1 2133 116 20 7 chr17 54096579 54096881 -35407672 - AluSx SINE Alu -5 307 2 642 306 48 17 chr17 54097045 54097336 -35407217 + L1M4 LINE L1 4029 4328 -1818 613 146 0 27 chr17 54097354 54097464 -35407089 - FLAM_A SINE Alu -3 139 33 255 253 0 13 chr17 54097464 54097543 -35407010 + L1M4 LINE L1 5084 5161 -985 788 162 0 22 chr17 54097550 54097686 -35406867 + FLAM_A SINE Alu 1 133 0 1812 238 105 26 chr17 54097696 54097869 -35406684 + L1M4 LINE L1 4319 4477 -1669 1785 167 50 0 chr17 54097869 54098151 -35406402 + AluJb SINE Alu 1 296 -16 1812 238 105 26 chr17 54098151 54098261 -35406292 + L1M4 LINE L1 4477 4577 -1569 216 0 0 0 chr17 54098261 54098285 -35406268 + (TG)n Simple_repeat Simple_repeat 1 24 0 1812 238 105 26 chr17 54098285 54098716 -35405837 + L1M4 LINE L1 4577 5094 -1052 225 0 0 0 chr17 54098716 54098741 -35405812 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1090 151 10 5 chr17 54098868 54099060 -35405493 + L1P LINE L1 4815 5007 -1139 2120 143 0 0 chr17 54099060 54099360 -35405193 - AluSx SINE Alu -11 301 2 336 182 0 0 chr17 54099362 54099428 -35405125 + L1MB8 LINE L1 6112 6177 -1 465 245 19 19 chr17 54099451 54099500 -35405053 + MER103 DNA DNA 4 52 -114 753 161 0 36 chr17 54099500 54099637 -35404916 + FLAM_A SINE Alu 1 132 -1 465 245 19 19 chr17 54099637 54099746 -35404807 + MER103 DNA DNA 51 162 -4 827 113 7 21 chr17 54099952 54100094 -35404459 + L1M4 LINE L1 5320 5459 -719 499 286 123 0 chr17 54100612 54100783 -35403770 - MIR SINE MIR -1 261 70 210 259 17 0 chr17 54102321 54102379 -35402174 + CT-rich Low_complexity Low_complexity 1 59 0 201 172 0 52 chr17 54103595 54103653 -35400900 - L2 LINE L2 -214 3058 3004 1736 134 33 53 chr17 54104541 54104840 -35399713 + AluSx SINE Alu 1 293 -19 192 143 0 0 chr17 54105147 54105189 -35399364 + (TC)n Simple_repeat Simple_repeat 1 42 0 465 19 0 0 chr17 54105267 54105321 -35399232 + (TC)n Simple_repeat Simple_repeat 2 55 0 240 111 0 0 chr17 54105385 54105421 -35399132 + (TG)n Simple_repeat Simple_repeat 2 37 0 235 357 51 0 chr17 54105433 54105531 -35399022 - MIR SINE MIR -71 137 35 230 250 0 0 chr17 54105539 54105587 -35398966 + MIR SINE MIR 79 126 -136 2608 271 87 1 chr17 54105605 54106481 -35398072 - L1ME3A LINE L1 -5 6165 5198 2008 105 24 0 chr17 54106481 54106805 -35397748 - AluSq SINE Alu 0 313 1 2608 271 87 1 chr17 54106805 54106849 -35397704 - L1ME3A LINE L1 -972 5198 5159 657 198 0 0 chr17 54106851 54106967 -35397586 - FRAM SINE Alu -9 167 52 437 99 28 0 chr17 54107090 54107161 -35397392 + GA-rich Low_complexity Low_complexity 2 74 0 384 176 146 199 chr17 54107341 54107476 -35397077 + MIR SINE MIR 10 126 -136 2183 88 0 26 chr17 54107476 54107781 -35396772 - AluSg SINE Alu -13 297 1 384 176 146 199 chr17 54107781 54107912 -35396641 + MIR SINE MIR 126 262 0 243 147 37 18 chr17 54109083 54109192 -35395361 + (TG)n Simple_repeat Simple_repeat 1 111 0 235 227 45 11 chr17 54109233 54109321 -35395232 + (TG)n Simple_repeat Simple_repeat 1 91 0 267 79 0 0 chr17 54109834 54109872 -35394681 + (TC)n Simple_repeat Simple_repeat 1 38 0 349 283 31 44 chr17 54111390 54111549 -35393004 - MIR3 SINE MIR -38 170 14 491 150 0 0 chr17 54111562 54111642 -35392911 - U6 snRNA snRNA -1 106 27 215 65 0 0 chr17 54111890 54111921 -35392632 + MIR SINE MIR 123 153 -109 366 23 0 0 chr17 54111936 54111979 -35392574 + (TG)n Simple_repeat Simple_repeat 1 43 0 255 31 0 0 chr17 54112872 54112904 -35391649 + (TCC)n Simple_repeat Simple_repeat 1 32 0 1612 180 21 0 chr17 54112904 54113187 -35391366 - AluJo SINE Alu -20 292 4 225 283 0 0 chr17 54115670 54115730 -35388823 + G-rich Low_complexity Low_complexity 1 60 0 201 345 11 23 chr17 54116621 54116708 -35387845 - MIR3 SINE MIR -11 197 112 215 333 0 0 chr17 54120853 54120913 -35383640 + MIR SINE MIR 36 95 -113 221 267 187 0 chr17 54121234 54121309 -35383244 - L2 LINE L2 -2 3270 3182 796 250 46 58 chr17 54122592 54122832 -35381721 + MIR SINE MIR 14 250 -12 2252 88 3 0 chr17 54124533 54124829 -35379724 + AluSc SINE Alu 1 297 -12 202 367 0 0 chr17 54125259 54125338 -35379215 + T-rich Low_complexity Low_complexity 1 79 0 327 191 152 29 chr17 54125662 54125767 -35378786 + MIR SINE MIR 6 123 -139 328 274 10 31 chr17 54127179 54127282 -35377271 + MIR3 SINE MIR 79 173 -35 489 320 69 6 chr17 54127504 54127634 -35376919 + MIR SINE MIR 77 222 -40 2384 75 0 10 chr17 54127634 54127941 -35376612 + AluSx SINE Alu 1 304 -8 489 320 69 6 chr17 54127941 54127985 -35376568 + MIR SINE MIR 222 262 0 431 319 95 56 chr17 54128468 54128492 -35376061 + L1M4 LINE L1 4182 4204 -1942 2457 83 0 0 chr17 54128492 54128804 -35375749 + AluSx SINE Alu 1 312 0 431 319 95 56 chr17 54128804 54129011 -35375542 + L1M4 LINE L1 4204 4422 -1724 2190 117 3 0 chr17 54129319 54129628 -35374925 + AluSq SINE Alu 1 310 -3 440 316 22 7 chr17 54129657 54129796 -35374757 - MIR SINE MIR -41 221 81 401 333 8 8 chr17 54129795 54129921 -35374632 + MIR SINE MIR 117 242 -20 * 325 169 26 39 chr17 54130730 54130807 -35373746 + MIR SINE MIR 58 133 -75 243 240 39 101 chr17 54131024 54131153 -35373400 - L2 LINE L2 -2 3270 3150 216 379 84 26 chr17 54131270 54131460 -35373093 - L2 LINE L2 -49 3223 3023 202 268 0 0 chr17 54131758 54131799 -35372754 + C-rich Low_complexity Low_complexity 5 45 0 292 179 0 18 chr17 54132671 54132727 -35371826 + L2 LINE L2 3249 3303 -10 251 179 0 54 chr17 54132677 54132733 -35371820 + MIR SINE MIR 210 262 0 * 981 281 12 16 chr17 54132891 54133140 -35371413 - MIR SINE MIR -12 250 3 495 301 182 0 chr17 54133287 54133490 -35371063 + MIR SINE MIR 19 258 -4 269 200 17 17 chr17 54133874 54133934 -35370619 + CT-rich Low_complexity Low_complexity 4 63 0 266 161 11 126 chr17 54134307 54134394 -35370159 - MIR SINE MIR -80 182 106 1904 166 13 0 chr17 54134446 54134754 -35369799 - AluJb SINE Alu 0 312 1 459 0 0 0 chr17 54134807 54134858 -35369695 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 54 0 0 chr17 54136094 54136131 -35368422 + AT_rich Low_complexity Low_complexity 1 37 0 951 205 73 34 chr17 54137828 54138062 -35366491 + MIR SINE MIR 6 248 -14 320 290 25 0 chr17 54138131 54138293 -35366260 + (CA)n Simple_repeat Simple_repeat 1 166 0 21 82 0 0 chr17 54139516 54139565 -35364988 + GC_rich Low_complexity Low_complexity 1 49 0 262 175 32 0 chr17 54139805 54139868 -35364685 - L1MD3 LINE L1 -2 7993 7929 180 259 0 0 chr17 54139870 54139924 -35364629 + CT-rich Low_complexity Low_complexity 3 56 0 203 96 77 0 chr17 54141156 54141208 -35363345 + CT-rich Low_complexity Low_complexity 2 57 0 288 0 0 0 chr17 54141239 54141271 -35363282 + (CA)n Simple_repeat Simple_repeat 2 33 0 452 124 115 26 chr17 54141558 54141671 -35362882 - ORSL DNA AcHobo -63 212 90 204 40 0 0 chr17 54143172 54143197 -35361356 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 298 278 33 33 chr17 54144434 54144524 -35360029 + MIR3 SINE MIR 119 208 0 620 307 63 47 chr17 54144632 54144932 -35359621 - L2 LINE L2 -1 3271 2967 244 271 35 35 chr17 54145011 54145096 -35359457 + MIR3 SINE MIR 124 208 0 592 353 34 71 chr17 54145115 54145667 -35358886 - L2 LINE L2 -434 2880 2349 2201 227 39 30 chr17 54145674 54145927 -35358626 - L1ME3A LINE L1 -13 6157 5908 1962 157 30 12 chr17 54145927 54146265 -35358288 - MER2 DNA MER2_type 0 344 1 2201 227 39 30 chr17 54146265 54146609 -35357944 - L1ME3A LINE L1 -262 5908 5555 665 335 148 21 chr17 54146611 54147380 -35357173 - L2 LINE L2 -955 2359 1493 690 253 25 0 chr17 54147388 54147546 -35357007 - MIR SINE MIR -1 261 100 251 267 22 22 chr17 54147631 54147721 -35356832 + L1MC5 LINE L1 7839 7928 -33 234 0 0 0 chr17 54147762 54147788 -35356765 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1675 150 52 21 chr17 54147798 54148085 -35356468 + AluJo SINE Alu 1 296 -16 344 267 58 0 chr17 54148114 54148200 -35356353 + L1M4 LINE L1 4152 4242 -1904 1211 178 0 5 chr17 54148200 54148397 -35356156 + AluJo SINE Alu 1 196 -116 928 221 56 11 chr17 54148397 54148682 -35355871 + L1M4 LINE L1 4427 4724 -1422 891 120 0 0 chr17 54148698 54148815 -35355738 + AluJb SINE Alu 1 117 -195 627 14 0 0 chr17 54148815 54148887 -35355666 + (TAAAA)n Simple_repeat Simple_repeat 4 75 0 466 208 0 0 chr17 54148887 54148988 -35355565 + L1M4 LINE L1 4763 4863 -1283 1620 116 0 5 chr17 54149091 54149315 -35355238 + AluSg/x SINE Alu 74 296 -16 182 176 0 0 chr17 54149338 54149372 -35355181 - MIR SINE MIR -63 145 112 548 312 123 15 chr17 54149489 54149944 -35354609 - L1MC4a LINE L1 -1741 6067 5564 261 157 214 0 chr17 54150293 54150363 -35354190 - MER94 DNA DNA -22 112 28 2143 115 0 0 chr17 54150374 54150661 -35353892 - AluSx SINE Alu -21 291 5 541 238 107 94 chr17 54151095 54151247 -35353306 - MIR SINE MIR 0 262 104 2135 122 0 0 chr17 54151247 54151541 -35353012 + AluSx SINE Alu 1 294 -18 541 238 107 94 chr17 54151541 54151632 -35352921 - MIR SINE MIR -158 104 16 * 636 248 68 48 chr17 54151605 54151811 -35352742 - MIR SINE MIR -43 219 10 227 261 29 0 chr17 54152230 54152299 -35352254 + L2 LINE L2 3185 3255 -17 1757 175 3 3 chr17 54153050 54153347 -35351206 - AluJo SINE Alu -15 297 1 283 261 54 22 chr17 54153640 54153732 -35350821 - MIR3 SINE MIR -10 198 104 765 274 45 18 chr17 54154214 54154437 -35350116 + MIR SINE MIR 24 252 -10 489 17 0 0 chr17 54154441 54154499 -35350054 + (CA)n Simple_repeat Simple_repeat 2 59 0 212 335 76 27 chr17 54155513 54155698 -35348855 + L2 LINE L2 2685 2878 -436 * 432 325 160 5 chr17 54155691 54155897 -35348656 + MIR SINE MIR 16 253 -9 2245 102 7 0 chr17 54155899 54156204 -35348349 - AluSx SINE Alu -5 307 1 260 273 111 10 chr17 54156417 54156516 -35348037 + L2 LINE L2 2940 3048 -224 518 302 37 11 chr17 54156596 54156785 -35347768 + MER91A DNA MER1_type 3 196 0 203 277 128 11 chr17 54157230 54157324 -35347229 - MIR3 SINE MIR -53 155 51 413 275 107 7 chr17 54157440 54157589 -35346964 + MIR SINE MIR 85 248 -14 23 33 0 0 chr17 54158006 54158036 -35346517 + GC_rich Low_complexity Low_complexity 1 30 0 34 55 0 0 chr17 54158136 54158191 -35346362 + GC_rich Low_complexity Low_complexity 1 55 0 224 241 13 51 chr17 54158431 54158510 -35346043 - MIR SINE MIR -170 92 17 805 233 85 6 chr17 54159112 54159288 -35345265 + AluSg/x SINE Alu 121 310 -2 183 80 0 0 chr17 54159288 54159313 -35345240 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 1950 120 27 7 chr17 54159826 54160125 -35344428 - AluSx SINE Alu -7 305 1 214 306 112 31 chr17 54161109 54161207 -35343346 + MIR3 SINE MIR 60 165 -43 751 245 42 21 chr17 54161345 54161537 -35343016 + MER91A DNA MER1_type 1 196 0 183 297 188 0 chr17 54161935 54162073 -35342480 - L2 LINE L2 -193 3079 2916 1637 172 9 65 chr17 54162937 54163262 -35341291 + AluJo SINE Alu 1 307 -5 315 307 64 50 chr17 54163283 54163405 -35341148 + L1ME3A LINE L1 5734 5863 -307 2185 85 0 0 chr17 54163405 54163717 -35340836 + AluY SINE Alu 1 312 0 315 307 64 50 chr17 54163717 54163811 -35340742 + L1ME3A LINE L1 5863 5954 -216 1392 126 13 17 chr17 54164090 54164320 -35340233 + AluSg/x SINE Alu 73 301 -11 1455 159 70 12 chr17 54164364 54164491 -35340062 + AluJb SINE Alu 9 127 -182 2334 83 0 13 chr17 54164491 54164805 -35339748 + AluSq SINE Alu 1 310 -3 1455 159 70 12 chr17 54164805 54164963 -35339590 + AluJb SINE Alu 127 309 0 300 349 14 27 chr17 54165874 54166020 -35338533 - MIR3 SINE MIR -13 195 52 2145 98 0 7 chr17 54166412 54166723 -35337830 - AluSx SINE Alu 0 309 1 246 294 18 28 chr17 54167919 54168028 -35336525 + CT-rich Low_complexity Low_complexity 2 109 0 247 335 122 14 chr17 54168320 54168469 -35336084 - MIR SINE MIR -78 130 18 2558 51 6 0 chr17 54168667 54168978 -35335575 + AluSp SINE Alu 1 313 0 564 238 40 26 chr17 54170025 54170176 -35334377 - MIR SINE MIR 0 262 110 820 206 0 0 chr17 54170190 54170331 -35334222 + FRAM SINE Alu 1 141 -35 2163 99 0 23 chr17 54170332 54170634 -35333919 - AluSx SINE Alu -17 295 1 1691 162 93 38 chr17 54170648 54171074 -35333479 - L1M4 LINE L1 -695 5489 5027 2028 138 0 0 chr17 54171074 54171372 -35333181 + AluSx SINE Alu 1 298 -14 1691 162 93 38 chr17 54171372 54171478 -35333075 - L1M4 LINE L1 -1157 5027 4928 208 350 80 12 chr17 54171595 54171758 -35332795 + L2 LINE L2 2839 3012 -260 1040 274 0 8 chr17 54171762 54172010 -35332543 - MIR SINE MIR 0 262 17 257 276 152 48 chr17 54172145 54172290 -35332263 - MIR3 SINE MIR -5 203 44 491 289 72 11 chr17 54172782 54172962 -35331591 + MIR SINE MIR 30 220 -42 494 225 205 7 chr17 54173490 54173641 -35330912 - MIR SINE MIR -13 249 69 409 347 8 0 chr17 54174050 54174174 -35330379 + MIR SINE MIR 110 234 -28 1854 133 21 11 chr17 54174525 54174811 -35329742 + AluSx SINE Alu 14 302 -10 219 204 0 0 chr17 54174816 54174865 -35329688 + G-rich Low_complexity Low_complexity 4 52 0 232 241 190 0 chr17 54176766 54176845 -35327708 - MIR SINE MIR -85 177 84 262 377 19 19 chr17 54176929 54177088 -35327465 - L2 LINE L2 -206 3066 2908 1995 148 131 22 chr17 54177089 54177501 -35327052 - LTR32 LTR ERVL 0 471 15 262 347 131 3 chr17 54178049 54178459 -35326094 - L2 LINE L2 -252 3061 2593 198 301 87 87 chr17 54178513 54178732 -35325821 - L2 LINE L2 -900 2414 2196 1777 120 88 0 chr17 54178734 54179008 -35325545 + AluSg SINE Alu 1 298 -12 346 229 52 0 chr17 54180817 54180921 -35323632 - MIR3 SINE MIR -41 167 54 2230 136 87 8 chr17 54181287 54181677 -35322876 - LTR52 LTR ERVL 0 421 1 374 322 102 0 chr17 54182531 54182708 -35321845 + MIR SINE MIR 18 212 -50 430 184 16 96 chr17 54182730 54182855 -35321698 + MER69A DNA AcHobo 60 174 -3 547 240 207 28 chr17 54182880 54183097 -35321456 + MIR SINE MIR 7 262 0 2165 54 11 4 chr17 54183133 54183409 -35321144 + AluSg SINE Alu 1 278 -32 216 0 0 0 chr17 54183415 54183439 -35321114 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2229 84 0 7 chr17 54183519 54183815 -35320738 - AluSg SINE Alu -16 294 1 183 42 0 0 chr17 54184439 54184463 -35320090 + (CAG)n Simple_repeat Simple_repeat 1 24 0 26 30 0 0 chr17 54185154 54185187 -35319366 + GC_rich Low_complexity Low_complexity 1 33 0 278 325 163 12 chr17 54186804 54186964 -35317589 + MIR3 SINE MIR 14 197 -11 182 339 36 36 chr17 54187044 54187156 -35317397 + MIR SINE MIR 113 224 -38 2325 103 0 0 chr17 54190470 54190781 -35313772 + AluSx SINE Alu 1 311 -1 291 315 98 28 chr17 54190892 54191076 -35313477 - MIR SINE MIR -55 207 13 195 69 0 0 chr17 54191386 54191415 -35313138 + (CCCTG)n Simple_repeat Simple_repeat 3 31 0 330 336 45 39 chr17 54192199 54192696 -35311857 + L2 LINE L2 2633 3199 -73 451 307 52 17 chr17 54193880 54194192 -35310361 - MLT1K LTR MaLR -62 526 177 477 103 21 52 chr17 54194289 54194386 -35310167 - THE1B LTR MaLR -81 283 190 207 0 0 0 chr17 54194392 54194415 -35310138 + (TC)n Simple_repeat Simple_repeat 2 24 0 1361 168 125 46 chr17 54194428 54194464 -35310089 - AluJb SINE Alu 0 302 270 2288 102 0 3 chr17 54194464 54194769 -35309784 + AluSg SINE Alu 1 304 -6 1361 168 125 46 chr17 54194769 54195012 -35309541 - AluJb SINE Alu -32 270 1 1067 159 16 5 chr17 54195021 54195210 -35309343 - AluJo SINE Alu 0 312 122 1541 187 61 0 chr17 54195222 54195500 -35309053 + AluJb SINE Alu 1 295 -17 570 232 119 0 chr17 54195500 54195677 -35308876 - L1ME2 LINE L1 -10 6154 5957 458 329 14 0 chr17 54195818 54195961 -35308592 - L2 LINE L2 -5 3308 3164 882 263 57 0 chr17 54196106 54196353 -35308200 + MIR SINE MIR 2 262 0 454 268 88 39 chr17 54197160 54197212 -35307341 - MIR SINE MIR -15 247 199 1967 156 0 3 chr17 54197212 54197514 -35307039 - AluJb SINE Alu -11 301 1 2294 69 0 3 chr17 54197522 54197860 -35306693 - AluY SINE Alu 0 311 1 454 268 88 39 chr17 54197860 54198003 -35306550 - MIR SINE MIR -69 193 33 1953 166 0 0 chr17 54198097 54198393 -35306160 + AluJo SINE Alu 2 297 -15 346 296 99 8 chr17 54198938 54199076 -35305477 + MIR SINE MIR 35 203 -59 2336 97 6 0 chr17 54199076 54199387 -35305166 + AluSq SINE Alu 1 313 0 346 296 99 8 chr17 54199387 54199453 -35305100 + MIR SINE MIR 203 262 0 197 346 178 9 chr17 54199739 54199846 -35304707 - L2 LINE L2 0 3272 3148 397 307 110 18 chr17 54201982 54202145 -35302408 + MIR SINE MIR 2 179 -83 927 159 19 0 chr17 54202145 54202302 -35302251 + AluJo SINE Alu 122 281 -31 480 35 0 0 chr17 54202306 54202364 -35302189 + (CA)n Simple_repeat Simple_repeat 2 59 0 203 217 43 58 chr17 54202389 54202458 -35302095 + MIR3 SINE MIR 99 166 -42 262 219 109 0 chr17 54203442 54203506 -35301047 + MIR SINE MIR 2 72 -190 541 321 24 0 chr17 54203573 54203741 -35300812 + MIR SINE MIR 89 260 -2 410 298 23 8 chr17 54203834 54203965 -35300588 + MIR3 SINE MIR 7 139 -69 474 347 68 0 chr17 54206385 54206575 -35297978 - MIR SINE MIR -6 256 54 702 296 11 0 chr17 54207255 54207444 -35297109 - MIR SINE MIR -41 221 31 392 127 0 13 chr17 54209176 54209255 -35295298 + (TG)n Simple_repeat Simple_repeat 2 79 0 267 350 23 55 chr17 54209255 54209475 -35295078 + L2 LINE L2 2871 3083 -189 835 233 37 0 chr17 54209580 54209769 -35294784 - MER58A DNA MER1_type -10 214 19 402 281 84 28 chr17 54210191 54210214 -35294339 - MIR SINE MIR -39 223 203 640 293 67 0 chr17 54210214 54210378 -35294175 + MER5B DNA MER1_type 4 178 0 402 281 84 28 chr17 54210378 54210532 -35294021 - MIR SINE MIR -59 203 38 1380 199 70 14 chr17 54210716 54210866 -35293687 - AluJo SINE Alu -9 303 163 312 83 0 0 chr17 54210866 54210914 -35293639 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2010 91 33 0 chr17 54210914 54211189 -35293364 - AluY SINE Alu -27 284 1 1380 199 70 14 chr17 54211189 54211324 -35293229 - AluJo SINE Alu -148 164 1 254 284 35 46 chr17 54211325 54211522 -35293031 + L1ME4a LINE L1 4255 4449 -1697 756 315 124 74 chr17 54211528 54212154 -35292399 + L1ME4a LINE L1 4527 5195 -951 2052 142 3 3 chr17 54212154 54212456 -35292097 + AluJb SINE Alu 1 302 -10 756 315 124 74 chr17 54212456 54212544 -35292009 + L1ME4a LINE L1 5195 5277 -869 647 275 124 40 chr17 54212576 54212667 -35291886 + L1ME4a LINE L1 5386 5468 -653 2105 125 20 0 chr17 54212667 54212972 -35291581 + AluSx SINE Alu 1 311 -1 647 275 124 40 chr17 54212972 54213349 -35291204 + L1ME4a LINE L1 5468 5893 -228 1616 183 24 7 chr17 54213350 54213643 -35290910 + AluJo SINE Alu 1 298 -14 2196 69 45 0 chr17 54213643 54213933 -35290620 + AluSx SINE Alu 1 303 -9 205 138 0 0 chr17 54213934 54213963 -35290590 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 2048 115 7 0 chr17 54214095 54214383 -35290170 + AluSq SINE Alu 1 290 -23 307 292 61 65 chr17 54214392 54214780 -35289773 + L1MC5 LINE L1 7499 7765 -196 28 61 0 0 chr17 54216617 54216666 -35287887 + AT_rich Low_complexity Low_complexity 1 49 0 323 340 109 7 chr17 54216668 54216815 -35287738 + L1MCa LINE L1 1930 2091 -4335 2210 120 0 0 chr17 54216919 54217220 -35287333 + AluSx SINE Alu 1 301 -11 2166 95 3 0 chr17 54217283 54217596 -35286957 + AluSx SINE Alu 1 314 0 946 229 76 8 chr17 54217642 54217878 -35286675 - MIR SINE MIR -10 252 1 415 304 30 15 chr17 54217878 54218006 -35286547 - MIR SINE MIR -97 165 36 2259 110 0 0 chr17 54221135 54221434 -35283119 + AluSx SINE Alu 1 299 -13 1762 146 4 21 chr17 54223112 54223392 -35281161 - AluJo SINE Alu -3 309 35 459 296 23 38 chr17 54223570 54223702 -35280851 - L2 LINE L2 -31 3241 3112 404 286 147 28 chr17 54223893 54224145 -35280408 - L2 LINE L2 -167 3105 2824 2149 133 0 0 chr17 54224207 54224515 -35280038 + AluSx SINE Alu 1 308 -4 320 194 265 0 chr17 54224575 54224673 -35279880 + MIR SINE MIR 110 233 -29 326 307 69 42 chr17 54227167 54227356 -35277197 - MIR3 SINE MIR -9 199 6 220 283 177 18 chr17 54227802 54227915 -35276638 + MIR3 SINE MIR 78 208 0 304 294 95 54 chr17 54229048 54229269 -35275284 - L1ME4a LINE L1 -1 6120 5891 352 309 32 16 chr17 54229350 54229476 -35275077 - L2 LINE L2 -236 3036 2909 2546 47 0 0 chr17 54230024 54230325 -35274228 + AluY SINE Alu 1 301 -10 333 286 42 8 chr17 54230848 54230967 -35273586 + MIR SINE MIR 24 146 -62 864 275 38 0 chr17 54231135 54231371 -35273182 - MIR SINE MIR 0 262 18 214 312 13 13 chr17 54231835 54231912 -35272641 - MIR SINE MIR -71 191 115 201 259 17 0 chr17 54232084 54232142 -35272411 + (CA)n Simple_repeat Simple_repeat 1 59 0 345 300 85 8 chr17 54233222 54233352 -35271201 + MIR SINE MIR 111 250 -12 359 265 78 9 chr17 54233417 54233555 -35270998 + MIR SINE MIR 31 177 -61 572 249 105 19 chr17 54233972 54234181 -35270372 - MIR SINE MIR 0 262 36 191 304 89 0 chr17 54234212 54234291 -35270262 - L2 LINE L2 -267 3005 2920 2141 119 0 0 chr17 54234769 54235063 -35269490 - AluSx SINE Alu -18 294 1 190 350 81 12 chr17 54235483 54235643 -35268910 + MIR3 SINE MIR 32 202 -6 2036 145 0 0 chr17 54237811 54238107 -35266446 + AluSx SINE Alu 1 296 -16 302 272 48 87 chr17 54238121 54238327 -35266226 - L2 LINE L2 -65 3248 3051 233 191 73 0 chr17 54238507 54238575 -35265978 - MLT1J LTR MaLR -362 149 77 287 283 101 0 chr17 54240162 54240261 -35264292 - MIR3 SINE MIR -19 189 81 186 43 0 0 chr17 54243015 54243038 -35261515 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 309 125 0 0 chr17 54243852 54243900 -35260653 - MIR SINE MIR -84 124 77 587 325 34 5 chr17 54245070 54245276 -35259277 + L2 LINE L2 3011 3222 -50 211 200 0 0 chr17 54245276 54245311 -35259242 + polypurine Low_complexity Low_complexity 3 37 0 305 239 77 37 chr17 54245417 54245554 -35258999 + MIR SINE MIR 51 187 -62 265 308 0 8 chr17 54245842 54245972 -35258581 + (TGAA)n Simple_repeat Simple_repeat 1 129 0 391 283 40 50 chr17 54246691 54246872 -35257681 + MIR SINE MIR 31 219 -43 2443 69 0 3 chr17 54246913 54247219 -35257334 - AluSq SINE Alu -8 305 1 317 286 119 57 chr17 54247242 54247426 -35257127 + L2 LINE L2 3006 3158 -114 1456 128 30 0 chr17 54247426 54247661 -35256892 - AluJo SINE Alu -70 242 1 317 286 119 57 chr17 54247661 54247782 -35256771 + L2 LINE L2 3158 3270 -2 503 250 157 6 chr17 54248345 54248521 -35256032 + MIR SINE MIR 4 195 -62 724 266 110 0 chr17 54249297 54249515 -35255038 - MIR SINE MIR 0 262 21 355 376 99 16 chr17 54249957 54250279 -35254274 + L2 LINE L2 2141 2489 -825 807 231 87 12 chr17 54250291 54250533 -35254020 + L2 LINE L2 2283 2542 -772 449 230 25 43 chr17 54250533 54250694 -35253859 + L1MC5 LINE L1 7721 7878 -83 315 146 0 0 chr17 54250815 54250870 -35253683 + (GGAGA)n Simple_repeat Simple_repeat 4 58 0 1341 231 87 10 chr17 54250924 54251602 -35252951 + L2 LINE L2 2582 3312 -1 2155 132 0 0 chr17 54251826 54252130 -35252423 - AluSx SINE Alu -8 304 1 798 266 38 17 chr17 54252300 54252537 -35252016 + MIR SINE MIR 15 256 -6 277 342 60 8 chr17 54252740 54252857 -35251696 + L2 LINE L2 3134 3256 -16 770 232 4 87 chr17 54252936 54253190 -35251363 + L2 LINE L2 3080 3312 -1 183 353 130 22 chr17 54253195 54253379 -35251174 - L2 LINE L2 -213 3059 2856 587 273 170 0 chr17 54253563 54253757 -35250796 - MIR SINE MIR 0 262 36 266 240 83 47 chr17 54253795 54253933 -35250620 - MIR3 SINE MIR -22 186 38 259 281 12 12 chr17 54254132 54254214 -35250339 + CT-rich Low_complexity Low_complexity 1 82 0 689 275 113 33 chr17 54254966 54255206 -35249347 + MIR SINE MIR 4 262 0 336 102 0 0 chr17 54255272 54255321 -35249232 + (CA)n Simple_repeat Simple_repeat 1 49 0 587 268 50 56 chr17 54255850 54256048 -35248505 - MIR3 SINE MIR -9 199 3 222 171 0 0 chr17 54256055 54256096 -35248457 + (TCCA)n Simple_repeat Simple_repeat 2 42 0 2456 50 0 3 chr17 54256818 54257117 -35247436 - AluY SINE Alu -13 298 1 200 171 24 0 chr17 54257150 54257191 -35247362 - MIR SINE MIR -114 148 107 757 168 0 16 chr17 54257199 54257324 -35247229 + FLAM_A SINE Alu 1 123 -10 2286 88 0 3 chr17 54257330 54257655 -35246898 + AluSx SINE Alu 1 324 0 180 0 0 0 chr17 54257658 54257678 -35246875 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2272 82 7 0 chr17 54257833 54258137 -35246416 + AluSp SINE Alu 1 306 -7 212 309 0 0 chr17 54258597 54258652 -35245901 + L2 LINE L2 3178 3232 -81 293 93 19 0 chr17 54258972 54259026 -35245527 + (CA)n Simple_repeat Simple_repeat 1 55 0 210 288 0 0 chr17 54259221 54259280 -35245273 + GA-rich Low_complexity Low_complexity 2 60 0 21 36 0 0 chr17 54260130 54260158 -35244395 + GC_rich Low_complexity Low_complexity 1 28 0 288 77 0 0 chr17 54260316 54260355 -35244198 + (TG)n Simple_repeat Simple_repeat 1 39 0 261 203 7 87 chr17 54260492 54260630 -35243923 + G-rich Low_complexity Low_complexity 6 132 0 188 211 240 29 chr17 54260773 54260877 -35243676 - L2 LINE L2 -1 3271 3146 324 120 0 0 chr17 54261181 54261231 -35243322 + (CA)n Simple_repeat Simple_repeat 1 50 0 243 341 63 16 chr17 54261644 54261770 -35242783 - MIR SINE MIR -45 217 86 2000 101 57 7 chr17 54261780 54262077 -35242476 + AluSx SINE Alu 1 312 0 229 338 98 30 chr17 54266959 54267092 -35237461 + MIR SINE MIR 66 207 -55 417 247 88 44 chr17 54267527 54267709 -35236844 + L2 LINE L2 2856 3045 -227 387 0 0 0 chr17 54268667 54268710 -35235843 + (TG)n Simple_repeat Simple_repeat 1 43 0 1714 149 17 20 chr17 54269137 54269433 -35235120 - AluJb SINE Alu -17 295 1 662 208 35 0 chr17 54269444 54269588 -35234965 - MIR SINE MIR -14 248 100 202 225 0 0 chr17 54269730 54269770 -35234783 + (CA)n Simple_repeat Simple_repeat 2 41 0 1416 138 4 17 chr17 54271975 54272206 -35232347 + AluJb SINE Alu 85 312 0 319 325 68 55 chr17 54273465 54273757 -35230796 + L2 LINE L2 2954 3249 -23 245 273 57 23 chr17 54273872 54273960 -35230593 + L2 LINE L2 3183 3273 -40 212 310 56 0 chr17 54275316 54275387 -35229166 + L2 LINE L2 3236 3310 -3 308 270 20 27 chr17 54276159 54276307 -35228246 + GA-rich Low_complexity Low_complexity 2 148 0 213 247 32 43 chr17 54277109 54277202 -35227351 - MIR3 SINE MIR -3 205 114 22 35 0 0 chr17 54279619 54279648 -35224905 + GC_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr17 54280244 54280272 -35224281 + GC_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr17 54280785 54280824 -35223729 + GC_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr17 54281185 54281214 -35223339 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr17 54281497 54281526 -35223027 + GC_rich Low_complexity Low_complexity 1 29 0 213 39 0 0 chr17 54281526 54281552 -35223001 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 435 313 28 7 chr17 54281957 54282101 -35222452 + MER5A DNA MER1_type 15 161 -28 269 278 0 14 chr17 54282704 54282776 -35221777 + C-rich Low_complexity Low_complexity 2 72 0 492 213 0 11 chr17 54284108 54284220 -35220333 + MIR SINE MIR 10 120 -88 186 283 163 0 chr17 54284810 54284902 -35219651 - MIR3 SINE MIR -9 199 93 325 290 56 0 chr17 54284911 54285018 -35219535 + MIR SINE MIR 20 132 -76 403 273 188 18 chr17 54285091 54285256 -35219297 + MIR SINE MIR 23 215 -47 2039 60 10 43 chr17 54286483 54286782 -35217771 + AluY SINE Alu 1 289 -22 293 148 62 49 chr17 54286898 54286939 -35217614 - L1MB3 LINE L1 -3 6180 6141 2322 58 0 7 chr17 54286939 54287253 -35217300 + AluY SINE Alu 1 311 0 293 148 62 49 chr17 54287253 54287292 -35217261 - L1MB3 LINE L1 -42 6141 6099 2005 271 31 34 chr17 54287392 54287614 -35216939 - L1MEc LINE L1 -4465 1931 1710 2185 109 3 0 chr17 54287614 54287917 -35216636 - AluSx SINE Alu -3 309 6 2005 271 31 34 chr17 54287917 54288556 -35215997 - L1MEc LINE L1 -4686 1710 1072 1055 96 0 0 chr17 54288583 54288719 -35215834 + AluSq/x SINE Alu 1 136 -177 313 277 39 29 chr17 54288760 54288972 -35215581 + L1MDb LINE L1 1137 1354 -5042 1791 132 4 0 chr17 54289078 54289336 -35215217 - AluSq SINE Alu -54 259 1 550 239 63 49 chr17 54289408 54289692 -35214861 - L1MEc LINE L1 -4052 2344 2057 225 130 19 74 chr17 54289703 54289757 -35214796 + MER58 DNA MER1_type 33 83 -132 640 191 90 21 chr17 54289764 54289868 -35214685 - L1MC3 LINE L1 -9 7776 7673 1941 158 64 59 chr17 54289868 54289935 -35214618 - L1MB2 LINE L1 0 6171 6106 2049 144 0 3 chr17 54289935 54290248 -35214305 - AluSx SINE Alu 0 312 1 1941 158 64 59 chr17 54290248 54290605 -35213948 - L1MB2 LINE L1 -65 6106 5824 2087 125 0 3 chr17 54290605 54290916 -35213637 - AluSx SINE Alu -2 310 1 1941 158 64 59 chr17 54290916 54291002 -35213551 - L1MB2 LINE L1 -347 5824 5740 1836 144 7 3 chr17 54291002 54291307 -35213246 - L1MC3 LINE L1 -194 7591 7286 2054 132 0 3 chr17 54291307 54291610 -35212943 + AluSx SINE Alu 1 302 -10 556 155 10 0 chr17 54291630 54291778 -35212775 - AluSc SINE Alu 0 352 204 393 171 68 11 chr17 54291780 54291868 -35212685 - L1MC3 LINE L1 -503 7282 7190 302 270 22 0 chr17 54291868 54291957 -35212596 - MLT1F1 LTR MaLR -442 125 35 2184 98 0 0 chr17 54292013 54292308 -35212245 + AluSc SINE Alu 1 295 -14 303 301 72 24 chr17 54292447 54292696 -35211857 + L1MDb LINE L1 2248 2508 -4079 1938 141 3 0 chr17 54292807 54293098 -35211455 + AluSx SINE Alu 1 292 -20 680 234 24 0 chr17 54293169 54293293 -35211260 + FLAM_A SINE Alu 1 127 -6 6113 132 141 82 chr17 54293307 54293591 -35210962 + L1MC1 LINE L1 30 296 -6130 2163 100 0 13 chr17 54293591 54293891 -35210662 + AluSx SINE Alu 1 296 -16 6113 132 141 82 chr17 54293891 54294381 -35210172 + L1MC1 LINE L1 296 756 -5670 2137 90 0 7 chr17 54294381 54294670 -35209883 + AluSx SINE Alu 1 287 -25 6113 132 141 82 chr17 54294670 54295357 -35209196 + L1MC1 LINE L1 756 1589 -4837 2125 189 0 9 chr17 54295357 54295707 -35208846 + MER7A DNA MER2_type 2 346 0 6113 132 141 82 chr17 54295707 54295794 -35208759 + L1MC1 LINE L1 1589 1670 -4756 5958 160 39 7 chr17 54295785 54296955 -35207598 + L1MC1 LINE L1 5290 6506 -107 * 2189 110 0 0 chr17 54296955 54297254 -35207299 - AluSq SINE Alu -14 299 1 5958 160 39 7 chr17 54297254 54297364 -35207189 + L1MC1 LINE L1 6506 6611 -2 2191 98 6 13 chr17 54297941 54298256 -35206297 + AluSq SINE Alu 1 313 0 2545 240 78 103 chr17 54298684 54299591 -35204962 + L1M4 LINE L1 1530 2458 -49 1595 188 29 0 chr17 54299591 54299894 -35204659 + AluJo SINE Alu 2 312 0 2545 240 78 103 chr17 54299894 54300070 -35204483 + L1M4 LINE L1 2458 2637 130 830 194 0 7 chr17 54300070 54300209 -35204344 - FLAM_C SINE Alu -4 139 2 2545 240 78 103 chr17 54300209 54300375 -35204178 + L1M4 LINE L1 2637 2806 299 3085 182 29 32 chr17 54300375 54301029 -35203524 + L1MB8 LINE L1 5526 6177 -1 2545 240 78 103 chr17 54301029 54301072 -35203481 + L1M4 LINE L1 2806 2849 342 1986 113 0 14 chr17 54301072 54301365 -35203188 - AluSx SINE Alu 0 312 24 2545 240 78 103 chr17 54301365 54302399 -35202154 + L1M4 LINE L1 2849 2231 -276 1992 152 3 0 chr17 54302399 54302702 -35201851 + AluSx SINE Alu 1 304 -8 2545 240 78 103 chr17 54302702 54302970 -35201583 + L1M4 LINE L1 2230 2503 -4 546 202 67 39 chr17 54303039 54303217 -35201336 + L1ME3A LINE L1 5047 5229 -917 675 136 0 0 chr17 54303217 54303327 -35201226 + (TTCC)n Simple_repeat Simple_repeat 1 110 0 1642 157 42 18 chr17 54303327 54303613 -35200940 - AluJb SINE Alu -18 294 2 760 240 60 53 chr17 54303613 54304140 -35200413 + L1ME3A LINE L1 5222 5743 -419 1717 176 3 16 chr17 54304140 54304453 -35200100 + AluJb SINE Alu 1 309 -3 760 240 60 53 chr17 54304453 54304876 -35199677 + L1ME3A LINE L1 5743 6162 0 273 182 45 30 chr17 54304881 54304947 -35199606 + CT-rich Low_complexity Low_complexity 5 71 0 2070 133 0 0 chr17 54305250 54305550 -35199003 + AluSx SINE Alu 1 300 -12 834 215 57 10 chr17 54305680 54305889 -35198664 + L1MC4 LINE L1 6459 6677 -1365 1121 148 27 18 chr17 54305892 54306157 -35198396 - MLT2A2 LTR ERVL 0 453 284 * 1839 104 4 4 chr17 54306141 54306419 -35198134 - THE1B LTR MaLR -86 278 1 454 238 0 0 chr17 54306420 54306521 -35198032 - MLT1A2 LTR MaLR -273 101 1 2031 133 20 0 chr17 54306533 54306834 -35197719 - AluSx SINE Alu -5 307 1 320 242 147 21 chr17 54306834 54306929 -35197624 - L1MC4 LINE L1 -866 7176 7070 410 59 24 59 chr17 54306930 54307015 -35197538 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 387 204 32 0 chr17 54307017 54307110 -35197443 - L1MC4 LINE L1 -1022 7020 6925 1522 188 46 32 chr17 54307110 54307483 -35197070 + MLT1B LTR MaLR 1 378 -12 1069 182 21 55 chr17 54307495 54307731 -35196822 - L1MC4 LINE L1 -1113 6929 6702 * 8694 103 38 6 chr17 54307722 54307841 -35196712 + THE1B-int LTR MaLR 146 260 -1320 2338 96 0 3 chr17 54307841 54308153 -35196400 - AluY SINE Alu 0 311 1 8694 103 38 6 chr17 54308153 54309395 -35195158 + THE1B-int LTR MaLR 260 1551 -29 1069 191 92 21 chr17 54309395 54309424 -35195129 + MLT1A1 LTR MaLR 64 90 -275 2549 126 3 8 chr17 54309424 54309790 -35194763 + THE1B LTR MaLR 1 364 0 1069 191 92 21 chr17 54309790 54310042 -35194511 + MLT1A1 LTR MaLR 90 365 0 1552 210 59 69 chr17 54310042 54310111 -35194442 + L1MC4 LINE L1 7110 7178 -630 2180 111 0 17 chr17 54310111 54310408 -35194145 + AluSx SINE Alu 1 292 -20 1552 210 59 69 chr17 54310408 54311047 -35193506 + L1MC4 LINE L1 7178 7808 0 1075 286 111 48 chr17 54311148 54311361 -35193192 + MLT1K LTR MaLR 14 212 -376 2087 112 20 0 chr17 54311361 54311656 -35192897 - AluSx SINE Alu -10 302 2 1075 286 111 48 chr17 54311656 54311981 -35192572 + MLT1K LTR MaLR 212 586 -2 532 275 6 31 chr17 54312417 54312577 -35191976 - MIR SINE MIR -87 175 20 648 285 116 10 chr17 54312803 54313038 -35191515 - MIR SINE MIR -1 261 4 186 211 0 0 chr17 54313038 54313074 -35191479 - L2 LINE L2 -30 3283 3248 555 301 52 21 chr17 54313709 54313902 -35190651 + MIR SINE MIR 17 215 -47 292 318 98 0 chr17 54314010 54314142 -35190411 + MIR SINE MIR 48 192 -70 1573 182 6 47 chr17 54315195 54315513 -35189040 - AluJb SINE Alu -6 306 2 1752 169 11 0 chr17 54316702 54316981 -35187572 + AluJo SINE Alu 1 282 -30 264 59 0 0 chr17 54316985 54317019 -35187534 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 194 279 82 75 chr17 54317232 54317379 -35187174 + L3 LINE CR1 1022 1169 -408 314 254 86 0 chr17 54317414 54317525 -35187028 - HERV16 LTR ERVL -2072 3436 3295 839 267 118 18 chr17 54317586 54318025 -35186528 - HERV16 LTR ERVL -1907 3089 2714 2308 106 0 0 chr17 54318026 54318338 -35186215 + AluSx SINE Alu 1 312 0 1748 193 11 13 chr17 54318648 54319027 -35185526 + L1MD3 LINE L1 7618 7995 0 2186 114 0 3 chr17 54320035 54320342 -35184211 + AluSx SINE Alu 1 306 -6 950 183 10 39 chr17 54320789 54320997 -35183556 + MIR SINE MIR 46 247 -15 2253 94 0 7 chr17 54321328 54321627 -35182926 - AluSq SINE Alu -16 297 1 292 296 26 52 chr17 54321765 54321880 -35182673 + MIR SINE MIR 81 192 -70 835 223 54 0 chr17 54322126 54322310 -35182243 + MIR SINE MIR 37 230 -32 291 248 40 20 chr17 54323094 54323195 -35181358 - MIR3 SINE MIR -40 168 66 471 287 40 0 chr17 54324999 54325149 -35179404 + MIR3 SINE MIR 51 206 -2 246 271 61 14 chr17 54325749 54325853 -35178700 - MIR SINE MIR -24 184 76 488 326 151 28 chr17 54326059 54326829 -35177724 + L2 LINE L2 2434 3310 -3 311 269 27 47 chr17 54327483 54327632 -35176921 + GA-rich Low_complexity Low_complexity 5 150 0 2129 114 3 13 chr17 54327727 54328042 -35176511 - AluSq SINE Alu -1 312 1 772 342 91 7 chr17 54328725 54329307 -35175246 + L2 LINE L2 1752 2382 -932 195 129 0 0 chr17 54329311 54329342 -35175211 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 182 61 0 30 chr17 54334699 54334732 -35169821 + (CTGGGG)n Simple_repeat Simple_repeat 3 34 0 2022 207 122 15 chr17 54335258 54335847 -35168706 - L1MC4 LINE L1 0 8042 7391 439 240 70 31 chr17 54340503 54340632 -35163921 + MIR SINE MIR 18 151 -57 2247 109 0 3 chr17 54340635 54340946 -35163607 + AluSg SINE Alu 1 310 0 182 268 0 0 chr17 54342027 54342068 -35162485 + L3b LINE CR1 1344 1384 -199 183 100 0 0 chr17 54349140 54349170 -35155383 + (A)n Simple_repeat Simple_repeat 1 30 0 204 40 0 0 chr17 54349916 54349941 -35154612 + (T)n Simple_repeat Simple_repeat 1 25 0 186 43 0 0 chr17 54351128 54351151 -35153402 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 238 180 33 16 chr17 54351166 54351227 -35153326 + CT-rich Low_complexity Low_complexity 2 63 0 2079 145 0 0 chr17 54351693 54351997 -35152556 - AluSx SINE Alu -8 304 1 665 290 32 5 chr17 54352702 54352888 -35151665 + MER3 DNA MER1_type 15 205 -4 432 199 16 119 chr17 54354631 54354713 -35149840 - MER33 DNA MER1_type -2261 363 274 2224 102 0 16 chr17 54354713 54355026 -35149527 + AluSx SINE Alu 1 308 -4 432 199 16 119 chr17 54355026 54355046 -35149507 - MER33 DNA MER1_type -2350 274 254 1455 176 34 11 chr17 54355046 54355308 -35149245 + AluJo SINE Alu 29 296 -16 432 199 16 119 chr17 54355308 54355492 -35149061 - MER33 DNA MER1_type -2370 254 1 698 208 0 0 chr17 54356854 54356979 -35147574 + FLAM_A SINE Alu 3 127 -6 184 274 20 0 chr17 54357012 54357063 -35147490 - L2 LINE L2 0 3313 3262 339 239 35 18 chr17 54357196 54357309 -35147244 - L2 LINE L2 -250 3063 2949 2349 95 3 0 chr17 54357740 54358046 -35146507 - AluSx SINE Alu -5 307 1 537 236 13 38 chr17 54358193 54358350 -35146203 + MIR SINE MIR 34 186 -76 1887 97 97 21 chr17 54359320 54359610 -35144943 + AluSx SINE Alu 1 312 0 485 209 202 0 chr17 54359637 54359766 -35144787 + MIR SINE MIR 9 163 -99 948 121 0 0 chr17 54359770 54359902 -35144651 + AluSq/x SINE Alu 1 132 -181 366 298 11 0 chr17 54359907 54360001 -35144552 + MIR SINE MIR 157 251 -11 1806 143 16 16 chr17 54360072 54360380 -35144173 - AluJo SINE Alu -4 308 1 926 153 43 43 chr17 54361778 54361941 -35142612 + FRAM SINE Alu 1 163 -3 379 272 125 0 chr17 54363116 54363252 -35141301 - MIR3 SINE MIR -19 189 37 1730 141 11 25 chr17 54363340 54363617 -35140936 - AluJb SINE Alu -17 295 23 563 265 175 14 chr17 54364386 54364609 -35139944 + MIR SINE MIR 2 260 -2 288 0 0 0 chr17 54364970 54365002 -35139551 + (TG)n Simple_repeat Simple_repeat 2 33 0 428 198 11 0 chr17 54367342 54367623 -35136930 + (TG)n Simple_repeat Simple_repeat 1 284 0 249 98 0 0 chr17 54367737 54367778 -35136775 + (TG)n Simple_repeat Simple_repeat 1 41 0 202 213 21 0 chr17 54368407 54368454 -35136099 + GA-rich Low_complexity Low_complexity 3 50 0 521 310 120 35 chr17 54368464 54369085 -35135468 + L2 LINE L2 2576 3243 -29 352 331 72 0 chr17 54369293 54369432 -35135121 + MIR SINE MIR 65 213 -49 241 292 229 0 chr17 54369420 54369516 -35135037 - L2 LINE L2 -8 3305 3188 * 575 267 18 55 chr17 54369533 54369698 -35134855 - MIR SINE MIR -34 228 70 816 193 148 58 chr17 54370690 54371013 -35133540 - L1MC5 LINE L1 -76 7885 7522 1652 106 173 0 chr17 54371013 54371268 -35133285 - AluSx SINE Alu -13 299 1 816 193 148 58 chr17 54371268 54371323 -35133230 - L1MC5 LINE L1 -439 7522 7473 951 117 0 28 chr17 54371327 54371549 -35133004 + (TTCC)n Simple_repeat Simple_repeat 1 215 0 1011 226 51 106 chr17 54371549 54372200 -35132353 - L1MC5 LINE L1 -467 7494 6880 193 138 0 0 chr17 54372479 54372508 -35132045 + L2 LINE L2 3244 3272 0 2191 87 17 10 chr17 54373594 54373892 -35130661 + AluSg SINE Alu 1 300 -10 1364 313 77 23 chr17 54373898 54374937 -35129616 + L1ME3 LINE L1 4180 5274 -872 1280 128 0 5 chr17 54374938 54375125 -35129428 + AluSp SINE Alu 116 301 -12 1003 186 0 6 chr17 54375186 54375363 -35129190 - AluJ SINE Alu -12 300 125 320 130 58 58 chr17 54375363 54375432 -35129121 - L1MC4 LINE L1 -1334 6708 6640 798 201 0 0 chr17 54375437 54375571 -35128982 - AluJ SINE Alu -178 134 1 1305 249 160 12 chr17 54375607 54376125 -35128428 + MLT1L LTR MaLR 4 598 -17 731 284 96 32 chr17 54376138 54376508 -35128045 + L1ME3 LINE L1 5326 5671 -491 2234 125 0 0 chr17 54376508 54376820 -35127733 + AluSx SINE Alu 1 312 0 731 284 96 32 chr17 54376820 54376990 -35127563 + L1ME3 LINE L1 5671 5850 -312 1843 143 24 3 chr17 54376990 54377277 -35127276 - AluJo SINE Alu -16 296 4 731 284 96 32 chr17 54377277 54377315 -35127238 + L1ME3 LINE L1 5850 5884 -278 413 301 7 52 chr17 54377518 54377654 -35126899 - L1ME LINE L1 -5127 943 814 569 75 47 140 chr17 54377657 54377764 -35126789 - AluSq SINE Alu -153 160 64 717 115 0 0 chr17 54377771 54377867 -35126686 + AluSg/x SINE Alu 166 261 -51 361 329 64 31 chr17 54377938 54378587 -35125966 - L1M4c LINE L1 -4756 1459 810 2418 258 99 0 chr17 54378675 54379507 -35125046 - L1MC4 LINE L1 -136 7649 6912 2943 183 20 14 chr17 54379507 54379994 -35124559 - L1MB8 LINE L1 0 6178 5696 15323 125 18 30 chr17 54379994 54380112 -35124441 - Tigger1 DNA MER2_type 0 2418 2300 2200 112 0 0 chr17 54380112 54380408 -35124145 + AluSx SINE Alu 1 296 -16 15323 125 18 30 chr17 54380408 54380484 -35124069 - Tigger1 DNA MER2_type -118 2300 2225 840 66 29 7 chr17 54380484 54380620 -35123933 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 15323 125 18 30 chr17 54380620 54381712 -35122841 - Tigger1 DNA MER2_type -193 2225 1121 1887 157 3 3 chr17 54381712 54382011 -35122542 - AluSx SINE Alu -11 301 3 15323 125 18 30 chr17 54382011 54382215 -35122338 - Tigger1 DNA MER2_type -1297 1121 916 2342 80 0 26 chr17 54382215 54382527 -35122026 + AluSc SINE Alu 3 306 -3 15323 125 18 30 chr17 54382527 54383482 -35121071 - Tigger1 DNA MER2_type -1502 916 1 2943 183 20 14 chr17 54383482 54383579 -35120974 - L1MB8 LINE L1 -482 5696 5590 2418 258 99 0 chr17 54383579 54383722 -35120831 - L1MC4 LINE L1 -873 6912 6786 2259 96 3 0 chr17 54383722 54384024 -35120529 + AluSp SINE Alu 5 307 -6 2418 258 99 0 chr17 54384024 54384073 -35120480 - L1MC4 LINE L1 -999 6786 6744 2069 112 3 10 chr17 54384073 54384369 -35120184 + AluSc SINE Alu 2 295 -14 2418 258 99 0 chr17 54384369 54384487 -35120066 - L1MC4 LINE L1 -1041 6744 6664 871 172 0 26 chr17 54384538 54384689 -35119864 - AluJo SINE Alu -165 147 1 243 177 6 223 chr17 54384699 54384814 -35119739 - L1MC4 LINE L1 -1418 6624 6558 1762 206 0 3 chr17 54384814 54385124 -35119429 - AluJb SINE Alu -1 311 3 243 177 6 223 chr17 54385124 54385183 -35119370 - L1MC4 LINE L1 -1484 6558 6488 1722 136 163 68 chr17 54385211 54385623 -35118930 - LTR47A LTR ERVL 0 452 2 408 231 7 14 chr17 54386315 54386458 -35118095 + GA-rich Low_complexity Low_complexity 2 143 0 487 278 10 98 chr17 54388068 54388145 -35116408 - MIR SINE MIR -50 212 130 1575 178 18 7 chr17 54388145 54388431 -35116122 - AluJo SINE Alu -23 289 1 487 278 10 98 chr17 54388431 54388547 -35116006 - MIR SINE MIR -132 130 36 391 188 25 0 chr17 54389104 54389184 -35115369 - MIR3 SINE MIR -48 160 79 245 294 11 0 chr17 54390946 54391038 -35113515 - L2 LINE L2 -270 3002 2910 550 385 86 8 chr17 54391113 54391372 -35113181 - L2 LINE L2 -609 2705 2403 267 103 0 0 chr17 54391372 54391411 -35113142 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 550 385 86 8 chr17 54391411 54391546 -35113007 - L2 LINE L2 -911 2403 2280 207 298 16 25 chr17 54391734 54391855 -35112698 + CT-rich Low_complexity Low_complexity 3 122 0 257 337 100 47 chr17 54392113 54392472 -35112081 - L2 LINE L2 -91 3181 2804 216 0 0 0 chr17 54392552 54392576 -35111977 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 236 330 124 0 chr17 54392585 54392682 -35111871 - L2 LINE L2 -30 3242 3134 211 208 42 0 chr17 54392769 54392817 -35111736 + L2 LINE L2 3138 3187 -85 315 278 130 0 chr17 54393351 54393459 -35111094 + MER94 DNA DNA 11 132 -2 278 26 26 0 chr17 54393517 54393556 -35110997 + (GA)n Simple_repeat Simple_repeat 1 40 0 334 326 14 0 chr17 54393824 54393968 -35110585 + GA-rich Low_complexity Low_complexity 2 147 0 183 100 0 0 chr17 54394803 54394833 -35109720 + (TG)n Simple_repeat Simple_repeat 2 31 0 183 156 0 0 chr17 54395802 54395834 -35108719 + (CA)n Simple_repeat Simple_repeat 1 32 0 309 296 0 10 chr17 54395914 54396012 -35108541 + C-rich Low_complexity Low_complexity 3 99 0 204 268 178 42 chr17 54398996 54399209 -35105344 - L2 LINE L2 -216 3056 2815 349 253 131 89 chr17 54399847 54400047 -35104506 - MIR SINE MIR 0 262 53 238 299 71 31 chr17 54400367 54400494 -35104059 + MIR3 SINE MIR 52 183 -25 1906 152 0 22 chr17 54401113 54401429 -35103124 - AluJo SINE Alu -3 309 1 815 132 18 160 chr17 54401430 54401534 -35103019 + MER53 DNA DNA 2 61 -128 1691 142 20 4 chr17 54401534 54401788 -35102765 + AluSx SINE Alu 3 260 -52 815 132 18 160 chr17 54401788 54401902 -35102651 + MER53 DNA DNA 61 189 0 207 261 0 15 chr17 54402472 54402537 -35102016 + GA-rich Low_complexity Low_complexity 1 64 0 1953 78 48 7 chr17 54403745 54404041 -35100512 - AluSx SINE Alu 0 309 3 234 320 0 13 chr17 54405239 54405314 -35099239 - MIR SINE MIR -70 192 119 23 0 0 0 chr17 54405603 54405626 -35098927 + AT_rich Low_complexity Low_complexity 1 23 0 2373 92 23 0 chr17 54405633 54405936 -35098617 + AluSg SINE Alu 1 310 0 680 169 0 8 chr17 54405939 54406057 -35098496 - AluJo/FLAM SINE Alu -194 118 2 421 254 143 42 chr17 54406525 54406714 -35097839 - L2 LINE L2 -61 3252 3045 470 343 22 0 chr17 54409324 54409502 -35095051 + L3 LINE CR1 1372 1553 -24 236 303 0 0 chr17 54411033 54411099 -35093454 - L2 LINE L2 -6 3266 3201 22 35 0 0 chr17 54411351 54411380 -35093173 + AT_rich Low_complexity Low_complexity 1 29 0 391 113 25 0 chr17 54411907 54411987 -35092566 + (TGAA)n Simple_repeat Simple_repeat 3 84 0 2161 114 7 0 chr17 54412396 54412707 -35091846 + AluSx SINE Alu 1 313 0 1420 299 204 22 chr17 54412741 54414439 -35090114 + L2 LINE L2 741 2748 -566 652 60 0 0 chr17 54414439 54414522 -35090031 + AluSg/x SINE Alu 210 292 -20 1374 111 3 171 chr17 54414532 54414882 -35089671 + AluJo SINE Alu 1 291 -11 292 333 48 14 chr17 54414901 54415108 -35089445 + L2 LINE L2 2764 2977 -337 220 200 80 0 chr17 54415159 54415234 -35089319 - L2 LINE L2 -308 2964 2884 650 216 0 0 chr17 54415264 54415389 -35089164 + FAM SINE Alu 1 125 -60 979 98 0 15 chr17 54415414 54415546 -35089007 + AluJo SINE Alu 5 134 -178 619 200 6 62 chr17 54415580 54415779 -35088774 - MLT1C LTR MaLR -7 460 196 481 205 16 8 chr17 54415779 54415906 -35088647 + CT-rich Low_complexity Low_complexity 3 130 0 1107 169 0 11 chr17 54415930 54416108 -35088445 - FRAM SINE Alu 0 176 1 389 268 48 36 chr17 54416112 54416280 -35088273 - MLT1C LTR MaLR -287 218 49 458 236 51 13 chr17 54416463 54416620 -35087933 - MER103 DNA DNA -2 164 2 253 306 45 36 chr17 54416700 54416811 -35087742 - MIR SINE MIR -55 153 42 504 297 103 41 chr17 54416847 54417044 -35087509 + L1MD2 LINE L1 6006 6189 -170 2099 134 10 0 chr17 54417044 54417342 -35087211 + AluSq SINE Alu 1 301 -12 504 297 103 41 chr17 54417342 54417374 -35087179 + L1MD2 LINE L1 6189 6218 -141 1623 152 27 74 chr17 54417374 54417670 -35086883 + AluJo SINE Alu 11 292 -20 504 297 103 41 chr17 54417670 54417759 -35086794 + L1MD2 LINE L1 6218 6345 -14 1665 155 0 0 chr17 54417886 54418125 -35086428 + AluJb SINE Alu 1 239 -73 498 247 50 97 chr17 54418324 54418583 -35085970 + MLT1K LTR MaLR 180 426 -162 182 36 0 36 chr17 54418711 54418739 -35085814 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1790 155 7 24 chr17 54418741 54419032 -35085521 - AluJb SINE Alu -24 288 3 302 175 16 16 chr17 54419037 54419100 -35085453 + MLT1K LTR MaLR 518 580 -8 287 351 35 0 chr17 54419109 54419223 -35085330 - MIR3 SINE MIR -51 157 40 1871 146 6 61 chr17 54421063 54421391 -35083162 - AluJo SINE Alu 0 312 3 1991 133 0 32 chr17 54421667 54421976 -35082577 + AluJb SINE Alu 1 299 -13 703 165 0 0 chr17 54422019 54422128 -35082425 + AluJo/FLAM SINE Alu 2 110 -202 423 261 8 0 chr17 54422126 54422245 -35082308 + FLAM_A SINE Alu 21 140 -2 * 943 165 21 107 chr17 54422355 54422532 -35082021 + Charlie4 DNA MER1_type 25 177 -331 845 219 0 24 chr17 54422532 54422701 -35081852 - FRAM SINE Alu -1 165 1 943 165 21 107 chr17 54422701 54422766 -35081787 + Charlie4 DNA MER1_type 177 246 -262 2197 120 3 0 chr17 54422773 54423073 -35081480 + AluSx SINE Alu 1 301 -11 416 141 0 0 chr17 54423083 54423147 -35081406 + Charlie4 DNA MER1_type 1883 1946 -15 23 0 0 0 chr17 54423147 54423170 -35081383 + AT_rich Low_complexity Low_complexity 1 23 0 3754 211 34 5 chr17 54423255 54424143 -35080410 + L1 LINE L1 2190 3103 -3043 339 143 4 42 chr17 54424157 54424241 -35080312 + AluSc SINE Alu 233 299 0 427 241 58 105 chr17 54424241 54424359 -35080194 + L1 LINE L1 3087 3194 -2952 1917 123 0 4 chr17 54424359 54424611 -35079942 - AluSq SINE Alu -62 251 1 427 241 58 105 chr17 54424611 54424683 -35079870 + L1 LINE L1 3194 3268 -2878 733 217 34 193 chr17 54425096 54425248 -35079305 - L2 LINE L2 0 3313 3139 1699 175 4 7 chr17 54425248 54425528 -35079025 + AluSx SINE Alu 21 299 -13 733 217 34 193 chr17 54425528 54425910 -35078643 - L2 LINE L2 -174 3139 2864 1913 173 7 0 chr17 54425929 54426236 -35078317 + AluJb SINE Alu 1 309 -3 270 238 82 41 chr17 54426477 54426599 -35077954 + MIR SINE MIR 20 146 -62 2347 100 0 0 chr17 54426822 54427112 -35077441 - AluSc SINE Alu -19 290 1 1775 154 50 7 chr17 54427502 54427801 -35076752 + AluJo SINE Alu 1 312 0 227 228 89 79 chr17 54427837 54427938 -35076615 - MIR3 SINE MIR -17 191 90 392 247 11 0 chr17 54428042 54428135 -35076418 + MER5A DNA MER1_type 12 105 -84 2183 114 19 3 chr17 54428277 54428585 -35075968 - AluSq SINE Alu 0 313 1 226 207 0 0 chr17 54428618 54428676 -35075877 - HAL1b LINE L1 -17 1331 1274 2316 117 0 0 chr17 54428723 54429021 -35075532 - AluSx SINE Alu -14 298 1 968 151 20 0 chr17 54429078 54429224 -35075329 - AluJb SINE Alu -4 308 160 337 179 24 0 chr17 54429241 54429325 -35075228 + (TA)n Simple_repeat Simple_repeat 1 86 0 772 167 0 8 chr17 54429325 54429457 -35075096 - FLAM_C SINE Alu -2 131 1 1208 124 6 6 chr17 54429471 54429649 -35074904 - AluSg/x SINE Alu -4 306 129 313 266 9 44 chr17 54429995 54430108 -35074445 + L2 LINE L2 3163 3271 -1 2134 135 3 3 chr17 54430318 54430615 -35073938 + AluSx SINE Alu 1 297 -15 416 103 0 15 chr17 54430869 54430937 -35073616 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 228 277 76 34 chr17 54431130 54431249 -35073304 - L2 LINE L2 -9 3263 3140 2128 147 0 10 chr17 54431368 54431682 -35072871 - AluSx SINE Alu -1 311 1 357 370 43 8 chr17 54431688 54431923 -35072630 + L2 LINE L2 2733 2975 -339 211 214 0 0 chr17 54432005 54432047 -35072506 + L2 LINE L2 3262 3303 -10 211 244 0 0 chr17 54432472 54432513 -35072040 - L2 LINE L2 -27 3286 3246 1399 146 24 5 chr17 54432519 54432732 -35071821 - AluJo SINE Alu -11 301 85 351 0 0 0 chr17 54432790 54432829 -35071724 + (TG)n Simple_repeat Simple_repeat 2 40 0 1965 172 0 0 chr17 54433261 54433564 -35070989 + AluSx SINE Alu 1 303 -9 2282 105 10 0 chr17 54433872 54434176 -35070377 - AluSg SINE Alu -3 307 1 308 299 87 8 chr17 54434204 54434331 -35070222 - MIR SINE MIR -102 160 24 183 42 0 0 chr17 54435529 54435553 -35069000 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1564 128 25 116 chr17 54435555 54435875 -35068678 - AluYb8 SINE Alu -25 293 3 1562 197 31 0 chr17 54435971 54436296 -35068257 - L1MC2 LINE L1 -1 6343 6009 2328 98 7 3 chr17 54436674 54436971 -35067582 + AluSg SINE Alu 1 298 -12 579 143 0 50 chr17 54437112 54437231 -35067322 - FLAM_C SINE Alu -4 139 27 1959 150 0 29 chr17 54437272 54437585 -35066968 - AluJb SINE Alu -8 304 1 2160 166 76 78 chr17 54438028 54438375 -35066178 + MER34B LTR ERV1 1 348 -217 2217 132 3 0 chr17 54438375 54438686 -35065867 + AluSx SINE Alu 1 312 0 2160 166 76 78 chr17 54438686 54438904 -35065649 + MER34B LTR ERV1 348 565 0 391 307 8 24 chr17 54439066 54439193 -35065360 + LTR16A LTR ERVL 97 221 -229 753 210 84 54 chr17 54439197 54439534 -35065019 + MER93b LTR ERV1 1 222 -151 618 191 22 96 chr17 54439595 54439734 -35064819 + MER93b LTR ERV1 208 333 -40 2212 92 0 46 chr17 54439734 54439890 -35064663 - AluSx SINE Alu -23 289 152 2347 100 0 0 chr17 54439890 54440191 -35064362 - AluY SINE Alu -9 302 2 2212 92 0 46 chr17 54440191 54440337 -35064216 - AluSx SINE Alu -160 152 1 618 191 22 96 chr17 54440337 54440375 -35064178 + MER93b LTR ERV1 333 372 -1 319 275 84 0 chr17 54440391 54440522 -35064031 + LTR16A LTR ERVL 304 445 -5 830 264 74 20 chr17 54440817 54441188 -35063365 - MER110A LTR ERV1 0 468 36 405 259 123 41 chr17 54441252 54441495 -35063058 + MLT1K LTR MaLR 203 465 -123 1771 183 3 10 chr17 54441812 54442113 -35062440 + AluJo SINE Alu 1 299 -13 796 196 18 61 chr17 54442562 54442791 -35061762 - MER20 DNA MER1_type 0 219 1 611 291 153 0 chr17 54443032 54443307 -35061246 - LTR33 LTR ERVL -51 470 154 309 358 20 7 chr17 54443384 54443532 -35061021 + L1ME3A LINE L1 5788 5937 -233 2039 119 3 17 chr17 54443616 54443918 -35060635 + AluJb SINE Alu 1 298 -14 227 297 117 18 chr17 54444436 54444547 -35060006 + L3 LINE CR1 263 384 -1193 1655 123 127 0 chr17 54444886 54445154 -35059399 - AluJb SINE Alu -10 302 1 948 121 0 0 chr17 54446251 54446383 -35058170 - FLAM_C SINE Alu 0 133 2 180 0 0 0 chr17 54446383 54446403 -35058150 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1814 168 11 7 chr17 54446403 54446688 -35057865 - AluJo SINE Alu -26 286 1 236 283 42 25 chr17 54446694 54446814 -35057739 - MLT1K LTR MaLR -12 576 455 * 357 281 54 49 chr17 54446812 54446997 -35057556 - MLT1K LTR MaLR -28 560 375 762 291 21 85 chr17 54447031 54447467 -35057086 + LTR16A LTR ERVL 33 440 -10 3937 274 111 76 chr17 54447532 54448777 -35055776 + HERV16 LTR ERVL 101 1301 -3695 4061 77 15 0 chr17 54448777 54449323 -35055230 - MER41A LTR ERV1 0 554 1 3937 274 111 76 chr17 54449323 54449446 -35055107 + HERV16 LTR ERVL 1301 1418 -3578 853 159 0 23 chr17 54449446 54449578 -35054975 - AluSq/x SINE Alu -184 129 1 3937 274 111 76 chr17 54449578 54449639 -35054914 + HERV16 LTR ERVL 1418 1475 -3521 2227 95 3 3 chr17 54449639 54449952 -35054601 - AluSp SINE Alu 0 313 1 3937 274 111 76 chr17 54449952 54450341 -35054212 + HERV16 LTR ERVL 1475 1849 -3147 2138 110 4 0 chr17 54450341 54450653 -35053900 - AluSx SINE Alu 0 313 1 3937 274 111 76 chr17 54450653 54451125 -35053428 + HERV16 LTR ERVL 1849 2612 -2384 1074 143 5 72 chr17 54451125 54451319 -35053234 + MER2 DNA MER2_type 1 180 -165 2222 128 0 28 chr17 54451319 54451640 -35052913 - AluSx SINE Alu 0 312 1 1074 143 5 72 chr17 54451640 54451668 -35052885 + MER2 DNA MER2_type 180 208 -137 26 0 0 0 chr17 54451668 54451694 -35052859 + AT_rich Low_complexity Low_complexity 1 26 0 240 163 23 0 chr17 54451733 54451776 -35052777 + MER2 DNA MER2_type 302 345 0 1221 312 74 22 chr17 54451776 54452072 -35052481 + HERV16 LTR ERVL 2611 2941 -2055 2103 79 30 0 chr17 54452072 54452338 -35052215 - AluY SINE Alu 0 311 38 1221 312 74 22 chr17 54452338 54452503 -35052050 + HERV16 LTR ERVL 2941 3096 -1900 350 280 19 0 chr17 54452520 54452627 -35051926 + MER34 LTR ERV1 1 109 -433 255 224 12 47 chr17 54452620 54452705 -35051848 + LTR29 LTR ERV1 137 218 -404 * 540 314 37 16 chr17 54452705 54452893 -35051660 - HERV16 LTR ERVL -2129 2867 2676 1526 87 13 26 chr17 54452910 54453014 -35051539 - MER30 DNA MER1_type 0 230 126 2267 101 3 0 chr17 54453014 54453311 -35051242 + AluSx SINE Alu 1 298 -14 1526 87 13 26 chr17 54453311 54453436 -35051117 - MER30 DNA MER1_type -104 126 4 1048 203 170 26 chr17 54453438 54453877 -35050676 + LTR48B LTR ERV1 109 571 -24 579 355 0 0 chr17 54453902 54454119 -35050434 + HERV16 LTR ERVL 3111 3327 -2327 1209 203 14 104 chr17 54454131 54454496 -35050057 - MLT2B3 LTR ERVL 0 554 223 557 225 75 0 chr17 54454499 54454619 -35049934 + FLAM_C SINE Alu 5 133 0 1879 159 0 7 chr17 54454631 54454920 -35049633 + AluJb SINE Alu 3 289 -23 26 30 0 0 chr17 54454920 54454953 -35049600 + AT_rich Low_complexity Low_complexity 1 33 0 292 329 7 29 chr17 54455011 54455148 -35049405 + HERV16 LTR ERVL 3214 3347 -1649 539 211 0 19 chr17 54455242 54455346 -35049207 + MLT2B2 LTR ERVL 259 360 -155 276 241 0 0 chr17 54455350 54455408 -35049145 - MLT2B3 LTR ERVL -145 409 352 532 309 38 4 chr17 54455472 54455708 -35048845 + HERV16 LTR ERVL 3760 4003 -1651 197 354 15 0 chr17 54455920 54455985 -35048568 - L3 LINE CR1 -97 1480 1415 2135 114 16 0 chr17 54456107 54456414 -35048139 - AluSx SINE Alu 0 312 1 1837 142 4 0 chr17 54456832 54457135 -35047418 - AluSx SINE Alu 0 304 1 21 0 0 0 chr17 54457195 54457216 -35047337 + AT_rich Low_complexity Low_complexity 1 21 0 493 233 10 0 chr17 54457516 54457619 -35046934 - FRAM SINE Alu -7 169 66 641 74 0 0 chr17 54457679 54457760 -35046793 + AluSg/x SINE Alu 211 291 -18 944 73 16 0 chr17 54458932 54459056 -35045497 - AluJb SINE Alu -148 164 39 396 294 9 18 chr17 54459058 54459167 -35045386 + L2 LINE L2 3205 3312 -1 316 306 161 42 chr17 54459793 54460178 -35044375 + L2 LINE L2 2805 3253 -60 1369 212 18 3 chr17 54460178 54460461 -35044092 + AluJo SINE Alu 3 289 -23 316 306 161 42 chr17 54460461 54460529 -35044024 + L2 LINE L2 3253 3312 -1 1834 159 3 10 chr17 54461170 54461479 -35043074 - AluJo SINE Alu -5 307 1 1394 151 0 0 chr17 54462075 54462287 -35042266 + AluJb SINE Alu 85 296 -16 2138 120 3 0 chr17 54462611 54462912 -35041641 + AluSx SINE Alu 1 302 -10 506 376 45 37 chr17 54463196 54463729 -35040824 + HAL1b LINE L1 42 402 -946 1558 169 61 3 chr17 54463762 54464057 -35040496 - AluSx SINE Alu 0 312 1 2396 72 0 3 chr17 54464092 54464396 -35040157 - AluSc SINE Alu -6 303 1 23 54 0 0 chr17 54464396 54464433 -35040120 + AT_rich Low_complexity Low_complexity 1 37 0 281 99 27 0 chr17 54464517 54464570 -35039983 + FRAM SINE Alu 60 97 -69 233 67 0 0 chr17 54464681 54464711 -35039842 - Alu SINE Alu -264 37 8 1154 148 0 0 chr17 54464717 54464886 -35039667 - AluJo/FRAM SINE Alu -10 302 134 1529 168 54 47 chr17 54464887 54465185 -35039368 - AluJb SINE Alu -8 304 5 228 179 0 0 chr17 54465233 54465272 -35039281 + MER112 DNA MER1_type 222 260 0 238 308 50 38 chr17 54465289 54465448 -35039105 + HAL1b LINE L1 514 674 -674 586 291 73 31 chr17 54465475 54465839 -35038714 + L1ME3A LINE L1 5501 5879 -291 1459 169 4 0 chr17 54466065 54466308 -35038245 - AluJo SINE Alu -22 290 47 2392 117 122 19 chr17 54466622 54467032 -35037521 + LTR47A LTR ERVL 1 452 0 798 169 0 15 chr17 54467103 54467233 -35037320 + FLAM_A SINE Alu 6 133 -9 2837 161 18 26 chr17 54467335 54467839 -35036714 + LTR53 LTR ERVL 5 504 -15 323 368 65 32 chr17 54467846 54468123 -35036430 + L1MDa LINE L1 2338 2623 -3917 366 294 25 66 chr17 54468127 54468691 -35035862 - L1MEd LINE L1 -4905 1214 674 2008 123 16 3 chr17 54469263 54469571 -35034982 - AluSx SINE Alu 0 312 1 676 108 0 20 chr17 54470150 54470252 -35034301 + LTR54B LTR ERV1 1 100 -398 1822 168 117 76 chr17 54470356 54470822 -35033731 - LTR54 LTR ERV1 -1 509 21 1951 145 0 3 chr17 54470822 54471118 -35033435 - AluJo SINE Alu -17 295 1 1822 168 117 76 chr17 54471118 54471140 -35033413 - LTR54 LTR ERV1 -489 21 1 333 338 68 39 chr17 54471145 54471352 -35033201 + L1MDa LINE L1 3885 4097 -2443 432 313 22 85 chr17 54471550 54471586 -35032967 + L1MDa LINE L1 4100 4137 -2403 1761 156 23 10 chr17 54471586 54471888 -35032665 + AluJo SINE Alu 1 306 -6 2115 104 0 0 chr17 54471888 54472200 -35032353 + AluSc SINE Alu 1 314 0 432 313 22 85 chr17 54472200 54472385 -35032168 + L1MDa LINE L1 4135 4309 -2231 317 276 19 19 chr17 54472651 54472756 -35031797 + L1MDa LINE L1 4299 4403 -2137 753 136 25 8 chr17 54472970 54473088 -35031465 - FLAM_A SINE Alu -5 137 18 21 0 0 0 chr17 54473112 54473133 -35031420 + AT_rich Low_complexity Low_complexity 1 21 0 2139 107 20 0 chr17 54473141 54473440 -35031113 + AluSg SINE Alu 1 305 -5 2288 63 6 31 chr17 54473440 54473757 -35030796 + AluY SINE Alu 1 310 -1 413 241 58 0 chr17 54473772 54473909 -35030644 + L1ME4a LINE L1 5976 6120 -1 739 214 16 57 chr17 54474792 54474984 -35029569 + MER5A DNA MER1_type 4 187 -2 44 20 0 0 chr17 54475441 54475492 -35029061 + GC_rich Low_complexity Low_complexity 1 51 0 260 214 21 50 chr17 54475720 54475860 -35028693 + (CGGG)n Simple_repeat Simple_repeat 3 138 0 226 330 21 11 chr17 54476991 54477085 -35027468 + L3 LINE CR1 1356 1450 -127 460 286 16 50 chr17 54477345 54477527 -35027026 + MIR SINE MIR 87 262 0 216 0 0 0 chr17 54477554 54477578 -35026975 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 383 242 66 0 chr17 54477579 54477670 -35026883 - L2 LINE L2 -13 3300 3204 229 294 67 67 chr17 54477913 54478032 -35026521 - L2 LINE L2 -537 2777 2659 853 147 16 0 chr17 54478923 54479052 -35025501 + FLAM_C SINE Alu 3 133 0 2037 127 7 0 chr17 54479355 54479646 -35024907 + AluSx SINE Alu 1 293 -19 2270 246 119 31 chr17 54479647 54480425 -35024128 - L2 LINE L2 -19 3294 2362 2134 110 3 0 chr17 54480425 54480717 -35023836 + AluSg SINE Alu 1 293 -17 2270 246 119 31 chr17 54480717 54481188 -35023365 - L2 LINE L2 -951 2362 1934 181 247 278 10 chr17 54481283 54481380 -35023173 - MIR SINE MIR -110 152 30 197 347 14 0 chr17 54481420 54481492 -35023061 - L2 LINE L2 -6 3266 3194 400 229 119 0 chr17 54482041 54482150 -35022403 + LTR16B LTR ERVL 336 457 -7 2065 73 52 21 chr17 54486662 54486951 -35017602 - AluSc SINE Alu -11 298 1 636 249 37 32 chr17 54487083 54487272 -35017281 - MIR3 SINE MIR 0 208 19 244 342 86 20 chr17 54487778 54487930 -35016623 + MIR SINE MIR 2 163 -99 234 91 0 0 chr17 54489630 54489663 -35014890 + (T)n Simple_repeat Simple_repeat 1 33 0 253 315 23 39 chr17 54490372 54490395 -35014158 - MIR3 SINE MIR -32 176 154 1443 158 87 8 chr17 54490395 54490660 -35013893 + AluJo SINE Alu 3 288 -24 253 315 23 39 chr17 54490660 54490766 -35013787 - MIR3 SINE MIR -54 154 49 474 305 64 11 chr17 54491303 54491490 -35013063 - MIR SINE MIR -58 204 8 1271 204 91 0 chr17 54491856 54491999 -35012554 - AluJo SINE Alu -14 288 159 518 0 0 16 chr17 54491999 54492062 -35012491 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1271 204 91 0 chr17 54492062 54492182 -35012371 - AluJo SINE Alu -143 159 1 267 242 63 32 chr17 54492349 54492444 -35012109 - MER5B DNA MER1_type -77 101 4 307 233 87 19 chr17 54497891 54497994 -35006559 - MIR SINE MIR -49 213 104 846 236 83 0 chr17 54498107 54498336 -35006217 + MIR SINE MIR 15 262 0 288 321 0 19 chr17 54498949 54499055 -35005498 + MIR SINE MIR 157 260 -2 1923 93 60 4 chr17 54500080 54500349 -35004204 - AluSq SINE Alu -9 304 21 667 340 62 11 chr17 54500943 54501314 -35003239 + L2 LINE L2 2357 2746 -568 1857 142 3 26 chr17 54501334 54501636 -35002917 - AluJb SINE Alu -17 295 1 433 309 187 8 chr17 54501641 54501903 -35002650 + L2 LINE L2 3005 3313 0 557 304 20 0 chr17 54502616 54502764 -35001789 - MIR SINE MIR -29 233 83 2853 160 70 9 chr17 54502766 54503320 -35001233 + L1MB7 LINE L1 5575 6167 -17 2058 139 0 3 chr17 54503320 54503630 -35000923 - AluJb SINE Alu -3 309 1 2853 160 70 9 chr17 54503630 54503650 -35000903 + L1MB7 LINE L1 6167 6184 0 1980 113 31 3 chr17 54503661 54503953 -35000600 + AluSx SINE Alu 1 300 -12 978 279 56 44 chr17 54505369 54505519 -34999034 - LTR33 LTR ERVL -8 513 366 1029 182 69 5 chr17 54505519 54505722 -34998831 - MER20 DNA MER1_type -3 216 1 978 279 56 44 chr17 54505722 54505984 -34998569 - LTR33 LTR ERVL -155 366 96 879 155 0 0 chr17 54506011 54506140 -34998413 - FLAM_C SINE Alu -13 130 2 337 253 72 0 chr17 54506362 54506445 -34998108 - MIR SINE MIR -90 172 84 2351 99 0 25 chr17 54506841 54507155 -34997398 - AluSx SINE Alu -6 306 1 2150 114 10 0 chr17 54507166 54507455 -34997098 - AluSc SINE Alu -17 292 1 432 307 76 9 chr17 54509012 54509194 -34995359 - MIR3 SINE MIR -15 193 2 303 302 101 13 chr17 54511409 54511558 -34992995 + MIR3 SINE MIR 35 196 -12 189 0 0 0 chr17 54512236 54512257 -34992296 + (CAG)n Simple_repeat Simple_repeat 2 22 0 375 239 22 67 chr17 54512718 54512898 -34991655 + L1ME4a LINE L1 5949 6120 -1 1247 157 15 10 chr17 54513343 54513540 -34991013 - AluJo SINE Alu -103 209 12 2361 96 3 0 chr17 54513576 54513877 -34990676 + AluSp SINE Alu 2 303 -10 1754 175 17 0 chr17 54514870 54515167 -34989386 + AluJo SINE Alu 2 303 -9 810 40 0 0 chr17 54515238 54515338 -34989215 - HY3 scRNA scRNA -1 100 1 473 309 112 0 chr17 54515917 54516069 -34988484 - L2 LINE L2 -26 3287 3119 1182 86 0 0 chr17 54516078 54516230 -34988323 + AluY SINE Alu 151 302 -9 1153 306 164 15 chr17 54516356 54517010 -34987543 - L2 LINE L2 -353 2961 2211 1666 200 3 7 chr17 54517348 54517638 -34986915 + AluJo SINE Alu 1 289 -23 198 0 0 0 chr17 54517640 54517662 -34986891 + (CCA)n Simple_repeat Simple_repeat 1 22 0 235 351 63 67 chr17 54517865 54518104 -34986449 + L2 LINE L2 3028 3265 -7 229 348 89 9 chr17 54518105 54518217 -34986336 - MIR SINE MIR -55 153 33 461 296 95 5 chr17 54518472 54518661 -34985892 + MIR SINE MIR 57 262 0 2421 93 3 6 chr17 54518906 54519219 -34985334 + AluSx SINE Alu 1 312 0 1813 126 0 0 chr17 54519349 54519596 -34984957 + AluSx SINE Alu 49 295 -17 189 107 0 0 chr17 54520092 54520120 -34984433 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 2182 117 10 7 chr17 54521008 54521317 -34983236 + AluSq SINE Alu 1 310 -3 978 123 158 0 chr17 54522028 54522199 -34982354 - MER30 DNA MER1_type -31 199 2 241 302 79 0 chr17 54522582 54522645 -34981908 + L2 LINE L2 3244 3311 -2 776 173 8 15 chr17 54522947 54523080 -34981473 - FLAM_C SINE Alu 0 133 2 668 152 0 110 chr17 54524321 54524466 -34980087 + FLAM_A SINE Alu 5 133 0 207 69 0 0 chr17 54524466 54524495 -34980058 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 2083 79 57 4 chr17 54524725 54525005 -34979548 + AluSp SINE Alu 2 296 -17 557 281 70 0 chr17 54525324 54525495 -34979058 - MIR SINE MIR -46 216 34 235 208 20 109 chr17 54526146 54526247 -34978306 - MIR3 SINE MIR -24 184 93 186 208 38 0 chr17 54526788 54526841 -34977712 + MIR3 SINE MIR 1 55 -153 368 262 151 89 chr17 54527151 54527398 -34977155 + L2 LINE L2 2843 3126 -146 384 240 134 69 chr17 54527398 54527644 -34976909 + MIR SINE MIR 1 262 0 368 262 151 89 chr17 54527644 54527801 -34976752 + L2 LINE L2 3126 3272 0 225 108 0 0 chr17 54527803 54527840 -34976713 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 236 222 63 0 chr17 54527845 54527908 -34976645 + MIR SINE MIR 104 170 -92 826 177 8 0 chr17 54527908 54528038 -34976515 + FLAM_C SINE Alu 1 131 -2 4987 75 101 3 chr17 54528113 54528815 -34975738 - LTR17 LTR ERV1 -9 771 1 2279 66 0 0 chr17 54528818 54529106 -34975447 - HERV17 LTR ERV1 -4 8622 8335 267 77 0 0 chr17 54529096 54529135 -34975418 - HERV17 LTR ERV1 -1078 7548 7510 * 4792 42 23 0 chr17 54529128 54529517 -34975036 - HERV17 LTR ERV1 -2607 6019 5610 180 0 0 0 chr17 54529517 54529537 -34975016 + (TTTCC)n Simple_repeat Simple_repeat 2 21 0 4792 42 23 0 chr17 54529537 54529748 -34974805 - HERV17 LTR ERV1 -3016 5610 5405 * 10328 44 7 23 chr17 54529727 54530202 -34974351 - HERV17 LTR ERV1 -4872 3754 3273 2663 56 0 0 chr17 54530202 54530507 -34974046 - AluY SINE Alu -6 305 1 10328 44 7 23 chr17 54530507 54531300 -34973253 - HERV17 LTR ERV1 -5353 3273 2507 2390 70 0 23 chr17 54531300 54531600 -34972953 - AluY SINE Alu -18 293 1 10328 44 7 23 chr17 54531600 54531677 -34972876 - HERV17 LTR ERV1 -6119 2507 2430 8758 58 48 12 chr17 54531660 54532556 -34971997 - HERV17 LTR ERV1 -6610 2016 1066 * 2340 70 7 33 chr17 54532556 54532858 -34971695 + AluY SINE Alu 1 294 -17 8758 58 48 12 chr17 54532858 54533160 -34971393 - HERV17 LTR ERV1 -7560 1066 776 5369 62 8 17 chr17 54533345 54534058 -34970495 - HERV17 LTR ERV1 -7917 709 3 5483 90 67 3 chr17 54534062 54534792 -34969761 - LTR17 LTR ERV1 -2 778 2 310 330 6 21 chr17 54534928 54535084 -34969469 - MIR3 SINE MIR -47 161 66 362 243 81 52 chr17 54535293 54535429 -34969124 - MIR SINE MIR -52 210 71 236 367 0 0 chr17 54535490 54535569 -34968984 - L2 LINE L2 -213 3059 2981 211 258 56 34 chr17 54535893 54535982 -34968571 + MIR SINE MIR 61 151 -111 689 189 0 38 chr17 54535982 54536114 -34968439 + FLAM_A SINE Alu 1 127 -6 1998 127 3 48 chr17 54536275 54536589 -34967964 + AluSx SINE Alu 1 300 -12 2115 121 17 0 chr17 54536673 54536962 -34967591 - AluSx SINE Alu -18 294 1 1657 166 23 20 chr17 54537128 54537429 -34967124 - AluJb SINE Alu -10 302 1 2499 80 0 3 chr17 54537457 54537758 -34966795 + AluSc SINE Alu 1 300 -9 2259 94 20 0 chr17 54537770 54538068 -34966485 + AluSg1 SINE Alu 1 304 -5 26 30 0 0 chr17 54538095 54538128 -34966425 + AT_rich Low_complexity Low_complexity 1 33 0 1642 168 39 32 chr17 54538187 54538497 -34966056 + AluJb SINE Alu 1 312 0 2067 122 0 36 chr17 54538497 54538801 -34965752 + AluSx SINE Alu 1 293 -19 263 248 10 105 chr17 54538807 54539006 -34965547 + L1MC/D LINE L1 5746 5932 -189 933 196 71 81 chr17 54539011 54539072 -34965481 - L1MC4 LINE L1 -1 8041 7981 863 154 0 29 chr17 54539072 54539208 -34965345 + FLAM_C SINE Alu 2 133 0 933 196 71 81 chr17 54539208 54539228 -34965325 - L1MC4 LINE L1 -61 7981 7962 2198 111 10 0 chr17 54539228 54539526 -34965027 - AluSp SINE Alu -12 301 1 933 196 71 81 chr17 54539526 54539601 -34964952 - L1MC4 LINE L1 -80 7962 7888 333 47 0 0 chr17 54539601 54539644 -34964909 + (CA)n Simple_repeat Simple_repeat 2 44 0 933 196 71 81 chr17 54539644 54539842 -34964711 - L1MC4 LINE L1 -154 7888 7593 690 197 8 0 chr17 54539860 54539982 -34964571 + FLAM_A SINE Alu 12 134 -8 220 138 15 46 chr17 54539983 54540048 -34964505 + (TATAA)n Simple_repeat Simple_repeat 1 63 0 193 280 227 0 chr17 54540241 54540316 -34964237 + MIR SINE MIR 48 139 -123 2058 151 7 0 chr17 54540338 54540643 -34963910 - AluSx SINE Alu -5 307 1 317 134 5 51 chr17 54540663 54540732 -34963821 - AluJ/FRAM SINE Alu -16 286 233 852 162 0 21 chr17 54540732 54540874 -34963679 - FLAM_C SINE Alu -4 139 1 588 177 10 0 chr17 54540874 54540970 -34963583 - FRAM SINE Alu -81 95 1 344 325 31 36 chr17 54541033 54541227 -34963326 + L2 LINE L2 2897 3089 -183 379 270 102 7 chr17 54541431 54541568 -34962985 + MLT1D LTR MaLR 216 365 -102 1253 166 0 19 chr17 54541568 54541773 -34962780 - AluSg SINE Alu -4 308 108 1952 178 68 34 chr17 54541779 54542223 -34962330 - LTR2B LTR ERV1 0 490 32 41948 70 20 23 chr17 54542242 54546840 -34957713 - Harlequin LTR ERV1 0 6896 2221 189 191 71 0 chr17 54546840 54546882 -34957671 - MER5C DNA MER1_type -25 299 255 41948 70 20 23 chr17 54546882 54549097 -34955456 - Harlequin LTR ERV1 -4675 2221 1 1937 176 70 34 chr17 54549097 54549540 -34955013 - LTR2B LTR ERV1 0 490 32 573 93 186 0 chr17 54549559 54549645 -34954908 - AluSg SINE Alu -207 103 2 711 194 8 0 chr17 54549645 54549779 -34954774 + MLT1D LTR MaLR 371 505 0 296 336 185 25 chr17 54549779 54550017 -34954536 + L2 LINE L2 2997 3272 0 1864 149 9 35 chr17 54550309 54550625 -34953928 + AluJo SINE Alu 1 308 -4 2510 78 0 0 chr17 54551284 54551590 -34952963 - AluY SINE Alu -5 306 1 4017 147 17 18 chr17 54551664 54552373 -34952180 - L1MB3 LINE L1 -1 6182 5475 696 122 0 0 chr17 54552379 54552477 -34952076 - FRAM SINE Alu -14 162 65 207 100 0 0 chr17 54552477 54552507 -34952046 + (CATA)n Simple_repeat Simple_repeat 2 31 0 397 254 74 8 chr17 54553405 54553527 -34951026 - MIR SINE MIR -69 193 64 236 322 99 53 chr17 54553547 54553699 -34950854 + MIR SINE MIR 103 261 -1 214 246 126 72 chr17 54553824 54553991 -34950562 - MIR3 SINE MIR -23 185 10 192 40 0 0 chr17 54555198 54555223 -34949330 + (CCCCG)n Simple_repeat Simple_repeat 3 27 0 26 50 0 0 chr17 54555267 54555307 -34949246 + GC_rich Low_complexity Low_complexity 1 40 0 233 150 50 0 chr17 54556770 54556810 -34947743 + MER57A LTR ERV1 295 336 -67 859 235 0 0 chr17 54557134 54557296 -34947257 + FRAM SINE Alu 1 162 -4 2020 134 24 0 chr17 54557296 54557594 -34946959 + AluSx SINE Alu 1 305 -7 2257 123 10 0 chr17 54557594 54557903 -34946650 + AluSx SINE Alu 1 312 0 200 263 132 61 chr17 54557921 54558035 -34946518 - L2 LINE L2 -10 3262 3141 361 319 8 12 chr17 54558186 54558308 -34946245 + MIR SINE MIR 10 133 -75 2251 117 7 3 chr17 54558601 54558909 -34945644 - AluSq SINE Alu -4 309 1 2287 137 58 10 chr17 54559320 54559477 -34945076 - LTR23 LTR ERV1 0 437 289 2354 102 3 0 chr17 54559477 54559781 -34944772 + AluSg SINE Alu 1 305 -5 2287 137 58 10 chr17 54559781 54560038 -34944515 - LTR23 LTR ERV1 -148 289 3 1292 209 17 0 chr17 54560643 54560882 -34943671 - AluJo SINE Alu -69 243 1 206 291 257 34 chr17 54560909 54560987 -34943566 + MIR SINE MIR 30 89 -173 1972 137 26 13 chr17 54560987 54561294 -34943259 - AluJo SINE Alu -1 311 1 206 291 257 34 chr17 54561294 54561390 -34943163 + MIR SINE MIR 89 243 -19 419 293 83 19 chr17 54561817 54561974 -34942579 + MIR3 SINE MIR 34 200 -8 2200 88 7 3 chr17 54562191 54562475 -34942078 - AluSg SINE Alu -4 306 22 348 176 0 54 chr17 54562476 54562550 -34942003 - FRAM/FAM SINE Alu -98 68 1 1566 172 0 22 chr17 54562742 54563010 -34941543 - AluJb SINE Alu -44 268 7 1813 160 3 17 chr17 54563124 54563434 -34941119 + AluJo SINE Alu 1 306 0 2207 103 7 0 chr17 54563496 54563787 -34940766 + AluSq SINE Alu 1 293 -20 2415 95 3 0 chr17 54563955 54564261 -34940292 - AluSp SINE Alu -6 307 1 337 158 113 212 chr17 54564375 54564490 -34940063 - L1M4 LINE L1 -865 5281 5156 1722 179 6 28 chr17 54564490 54564808 -34939745 - AluJb SINE Alu -1 311 1 337 158 113 212 chr17 54564808 54564883 -34939670 - L1M4 LINE L1 -990 5156 5075 854 152 16 0 chr17 54564883 54565008 -34939545 - FLAM_A SINE Alu -6 127 1 337 158 113 212 chr17 54565008 54565189 -34939364 - L1M4 LINE L1 -1071 5075 4946 2636 55 0 0 chr17 54565189 54565520 -34939033 - AluY SINE Alu 0 331 1 2190 130 0 3 chr17 54565522 54565823 -34938730 - AluSp SINE Alu -11 302 3 21 0 0 0 chr17 54566023 54566044 -34938509 + AT_rich Low_complexity Low_complexity 1 21 0 355 255 157 0 chr17 54566144 54566246 -34938307 - MER91A DNA MER1_type -1 195 78 1758 160 50 0 chr17 54566459 54566578 -34937975 + AluJo SINE Alu 1 113 -199 189 0 0 0 chr17 54566578 54566599 -34937954 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1758 160 50 0 chr17 54566599 54566760 -34937793 + AluJo SINE Alu 113 295 -17 951 175 48 0 chr17 54567157 54567323 -34937230 + MER2 DNA MER2_type 1 174 -171 306 320 118 13 chr17 54567431 54567584 -34936969 - L1ME LINE L1 -524 5646 5478 2123 134 0 28 chr17 54567637 54567958 -34936595 - AluSx SINE Alu 0 312 1 378 180 0 0 chr17 54567965 54568026 -34936527 + MER2 DNA MER2_type 284 344 -1 1659 147 20 47 chr17 54568166 54568465 -34936088 - AluJo SINE Alu -20 292 2 573 261 88 48 chr17 54568630 54568786 -34935767 - L1MC/D LINE L1 -610 5544 5396 704 189 33 0 chr17 54568786 54568908 -34935645 + FLAM_A SINE Alu 1 126 -7 573 261 88 48 chr17 54568908 54569186 -34935367 - L1MC/D LINE L1 -758 5396 5180 1727 129 11 19 chr17 54570302 54570566 -34933987 - AluJb SINE Alu -50 262 1 472 289 53 7 chr17 54570622 54570774 -34933779 + MIR SINE MIR 28 186 -76 193 349 38 38 chr17 54571146 54571252 -34933301 + MIR SINE MIR 47 152 -56 259 290 80 91 chr17 54571263 54571439 -34933114 + MER5B DNA MER1_type 5 178 0 189 0 0 0 chr17 54571622 54571643 -34932910 + (CTGGGG)n Simple_repeat Simple_repeat 1 21 0 1573 167 46 32 chr17 54571963 54572245 -34932308 - AluSx SINE Alu -26 286 1 1019 174 0 5 chr17 54572275 54572459 -34932094 - MER34 LTR ERV1 0 542 360 479 98 0 0 chr17 54572460 54572521 -34932032 + Alu SINE Alu 1 61 -250 1643 174 13 48 chr17 54572769 54573079 -34931474 + AluJb SINE Alu 1 299 -13 1581 237 89 6 chr17 54573561 54573575 -34930978 - L1ME3A LINE L1 -6 6164 6153 1610 108 0 0 chr17 54573575 54573778 -34930775 - AluSx SINE Alu -73 239 37 1581 237 89 6 chr17 54573778 54574244 -34930309 - L1ME3A LINE L1 -17 6153 5644 2269 89 0 26 chr17 54574468 54574609 -34929944 + AluSx SINE Alu 3 146 -166 2378 105 0 3 chr17 54574609 54574915 -34929638 + AluSq SINE Alu 1 305 -8 2269 89 0 26 chr17 54574915 54575075 -34929478 + AluSx SINE Alu 146 296 -16 824 161 8 0 chr17 54575739 54575863 -34928690 - FLAM_C SINE Alu -8 125 1 1437 162 75 0 chr17 54576336 54576577 -34927976 - AluJo SINE Alu -15 297 39 672 121 0 0 chr17 54576922 54577013 -34927540 - AluJ/FLAM SINE Alu -220 92 2 1742 185 3 3 chr17 54577025 54577317 -34927236 - AluJo SINE Alu -20 292 1 368 256 180 29 chr17 54577327 54577448 -34927105 - L1ME LINE L1 -302 5819 5718 2449 87 0 10 chr17 54577448 54577759 -34926794 - AluSc SINE Alu -1 308 1 198 0 0 0 chr17 54577764 54577786 -34926767 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 368 256 180 29 chr17 54577786 54577830 -34926723 - L1ME LINE L1 -406 5715 5622 363 295 14 7 chr17 54577925 54578064 -34926489 - MER69 DNA AcHobo -7 2519 2380 21 36 0 0 chr17 54578713 54578741 -34925812 + AT_rich Low_complexity Low_complexity 1 28 0 2138 136 3 7 chr17 54578822 54579124 -34925429 + AluSx SINE Alu 1 301 -11 288 0 0 0 chr17 54579188 54579220 -34925333 + (CA)n Simple_repeat Simple_repeat 2 33 0 1091 136 20 25 chr17 54579451 54579649 -34924904 + L1MB3 LINE L1 5982 6178 -5 502 68 29 87 chr17 54579657 54579674 -34924879 + L1MB8 LINE L1 5813 5829 -349 2334 70 0 35 chr17 54579674 54579987 -34924566 + AluY SINE Alu 1 302 -9 502 68 29 87 chr17 54579987 54580072 -34924481 + L1MB8 LINE L1 5829 5909 -269 2249 124 0 0 chr17 54580072 54580378 -34924175 + AluSx SINE Alu 1 306 -6 2407 149 18 29 chr17 54580435 54580885 -34923668 + MER65A LTR ERV1 1 445 0 1960 157 48 15 chr17 54581020 54581357 -34923196 + MER7A DNA MER2_type 1 346 0 1996 133 0 7 chr17 54581821 54582131 -34922422 - AluJb SINE Alu 0 308 1 375 95 89 15 chr17 54582142 54582223 -34922330 + L1MB5 LINE L1 5888 5979 -195 2226 105 0 3 chr17 54582354 54582639 -34921914 + AluSx SINE Alu 15 298 -14 2049 141 24 43 chr17 54582922 54583054 -34921499 - L1M4 LINE L1 -368 5806 5673 1735 176 3 23 chr17 54583054 54583360 -34921193 - AluJo SINE Alu -12 300 1 2049 141 24 43 chr17 54583360 54583559 -34920994 - L1M4 LINE L1 -501 5673 5447 2376 121 0 0 chr17 54583559 54583872 -34920681 - AluSq SINE Alu 0 313 1 2049 141 24 43 chr17 54583872 54584013 -34920540 - L1M4 LINE L1 -727 5447 5305 312 211 92 13 chr17 54584029 54584105 -34920448 - L2 LINE L2 0 3313 3232 862 201 39 0 chr17 54584463 54584617 -34919936 + FRAM SINE Alu 4 163 -3 1232 101 6 0 chr17 54584635 54584803 -34919750 + L1PA10 LINE L1 5988 6156 -12 186 43 0 0 chr17 54584807 54584830 -34919723 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 246 328 109 25 chr17 54585201 54585320 -34919233 + MIR SINE MIR 36 164 -98 2183 104 7 33 chr17 54585323 54585630 -34918923 - AluSx SINE Alu -13 299 1 523 183 0 10 chr17 54585705 54585809 -34918744 + L1MD1 LINE L1 6054 6156 -86 230 298 0 0 chr17 54585929 54585986 -34918567 - AluSp SINE Alu -110 193 137 347 253 12 12 chr17 54586004 54586087 -34918466 - MIR SINE MIR -152 110 28 24 32 0 0 chr17 54586717 54586748 -34917805 + GC_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr17 54586833 54586863 -34917690 + GC_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr17 54587861 54587883 -34916670 + AT_rich Low_complexity Low_complexity 1 22 0 699 178 0 30 chr17 54587883 54587901 -34916652 - FLAM_C SINE Alu -171 131 114 354 23 0 0 chr17 54587901 54587944 -34916609 + (TG)n Simple_repeat Simple_repeat 2 44 0 699 178 0 30 chr17 54587944 54588060 -34916493 - FLAM_C SINE Alu -188 114 1 819 200 103 0 chr17 54588609 54588764 -34915789 + FAM SINE Alu 1 171 -4 332 258 30 13 chr17 54588793 54588902 -34915651 + L1MC4 LINE L1 1996 6983 -1339 1824 135 39 21 chr17 54588904 54589185 -34915368 - AluJo SINE Alu -26 286 1 2605 43 0 10 chr17 54590413 54590718 -34913835 - AluY SINE Alu -9 302 1 1507 116 5 0 chr17 54591043 54591250 -34913303 + AluY SINE Alu 101 308 -3 1724 184 10 7 chr17 54591258 54591557 -34912996 + AluJo SINE Alu 1 300 -12 738 120 0 0 chr17 54591562 54591670 -34912883 - MER34 LTR ERV1 -430 112 5 581 298 19 19 chr17 54592372 54592530 -34912023 + MIR SINE MIR 48 205 -57 4294 146 61 29 chr17 54592533 54592749 -34911804 + L1MB7 LINE L1 5114 5322 -862 2215 133 0 0 chr17 54592749 54593049 -34911504 + AluSx SINE Alu 4 303 -9 4294 146 61 29 chr17 54593049 54593835 -34910718 + L1MB7 LINE L1 5322 6153 -31 189 254 113 28 chr17 54593868 54593939 -34910614 + MIR SINE MIR 186 262 0 2385 86 0 7 chr17 54594028 54594329 -34910224 + AluSc SINE Alu 1 299 -10 182 37 37 0 chr17 54594420 54594447 -34910106 + (TA)n Simple_repeat Simple_repeat 1 28 0 224 319 29 0 chr17 54594637 54594706 -34909847 + MIR SINE MIR 29 99 -163 441 126 46 0 chr17 54594711 54594798 -34909755 + MER53 DNA DNA 2 92 -97 391 119 69 10 chr17 54594854 54594955 -34909598 + MER53 DNA DNA 55 161 -28 431 261 124 20 chr17 54594983 54595136 -34909417 - MIR SINE MIR -73 189 21 2255 93 7 13 chr17 54595172 54595473 -34909080 - AluSg SINE Alu -11 299 1 2300 146 137 5 chr17 54595606 54596052 -34908501 - MLT1D LTR MaLR 0 505 1 196 344 50 44 chr17 54596120 54596300 -34908253 - MIR SINE MIR -54 208 28 231 277 117 11 chr17 54596786 54596880 -34907673 - L2 LINE L2 -30 3283 3180 1852 148 0 45 chr17 54596990 54597301 -34907252 - AluJo SINE Alu -10 302 6 213 313 97 51 chr17 54598046 54598088 -34906465 + L2 LINE L2 2875 2914 -358 2109 146 0 13 chr17 54598088 54598396 -34906157 - AluJb SINE Alu -8 304 1 213 313 97 51 chr17 54598396 54598529 -34906024 + L2 LINE L2 2914 3058 -214 1489 178 101 26 chr17 54598726 54599113 -34905440 + L1MB5 LINE L1 5759 6174 0 319 275 65 43 chr17 54599184 54599322 -34905231 - MIR3 SINE MIR -48 160 20 183 267 27 53 chr17 54599502 54599577 -34904976 + L2 LINE L2 3151 3223 -49 678 183 100 8 chr17 54599885 54600005 -34904548 - AluJo SINE Alu -51 261 131 1121 167 10 25 chr17 54600021 54600225 -34904328 + AluJb SINE Alu 85 285 -27 971 135 0 0 chr17 54600234 54600367 -34904186 - AluJo SINE Alu -169 133 1 266 136 0 0 chr17 54600371 54600430 -34904123 + L1MD1 LINE L1 6179 6237 -5 761 301 88 6 chr17 54600480 54600822 -34903731 - MLT1J LTR MaLR -100 411 42 1945 109 4 8 chr17 54601071 54601338 -34903215 - AluSx SINE Alu -46 266 1 475 239 125 16 chr17 54601391 54601575 -34902978 - LTR16C LTR ERVL 0 491 288 2493 66 6 22 chr17 54602506 54602823 -34901730 + AluSp SINE Alu 1 312 -1 2018 161 0 16 chr17 54602833 54603150 -34901403 + AluJb SINE Alu 1 312 0 519 268 45 25 chr17 54603731 54603888 -34900665 + L2 LINE L2 3113 3272 0 444 253 17 84 chr17 54603922 54604100 -34900453 + MER5A DNA MER1_type 2 167 -22 * 448 281 30 24 chr17 54603966 54604130 -34900423 - MER5A DNA MER1_type -24 165 1 451 321 67 96 chr17 54604450 54604793 -34899760 + L2 LINE L2 2940 3272 0 407 256 124 0 chr17 54604989 54605110 -34899443 + L2 LINE L2 3134 3269 -3 1732 175 0 23 chr17 54605295 54605603 -34898950 - AluJb SINE Alu -11 301 1 204 254 113 14 chr17 54607107 54607178 -34897375 + MER5A DNA MER1_type 35 112 -77 267 31 0 0 chr17 54607983 54608015 -34896538 + (TG)n Simple_repeat Simple_repeat 2 33 0 271 237 118 0 chr17 54608913 54608989 -34895564 - MIR SINE MIR -60 148 64 216 330 180 0 chr17 54608998 54609098 -34895455 + L2 LINE L2 3196 3313 0 197 191 0 21 chr17 54609095 54609142 -34895411 - MIR SINE MIR -140 68 23 * 247 289 241 0 chr17 54611603 54611686 -34892867 - MIR SINE MIR -111 151 49 218 293 58 117 chr17 54612085 54612130 -34892423 - MIR SINE MIR -73 189 143 2428 73 0 10 chr17 54612130 54612444 -34892109 - AluY SINE Alu 0 311 1 218 293 58 117 chr17 54612444 54612586 -34891967 - MIR SINE MIR -119 143 13 201 274 0 0 chr17 54617919 54617970 -34886583 - MIR SINE MIR -109 153 103 336 324 171 28 chr17 54618827 54618979 -34885574 - L2 LINE L2 0 3313 3184 2143 104 3 16 chr17 54618979 54619295 -34885258 + AluSx SINE Alu 1 312 0 336 324 171 28 chr17 54619295 54619463 -34885090 - L2 LINE L2 -129 3184 2947 * 376 243 105 40 chr17 54619460 54619612 -34884941 + L2 LINE L2 3146 3307 -6 518 179 71 54 chr17 54620374 54620486 -34884067 - MER81 DNA DNA 0 114 1 2008 153 0 3 chr17 54621018 54621325 -34883228 - AluSx SINE Alu -6 306 1 637 231 0 92 chr17 54621416 54621473 -34883080 - L1MB8 LINE L1 -5 6173 6112 1468 159 19 52 chr17 54621473 54621743 -34882810 - AluJo SINE Alu -23 289 29 637 231 0 92 chr17 54621743 54621936 -34882617 - L1MB8 LINE L1 -66 6112 5946 387 330 3 0 chr17 54622056 54622409 -34882144 + (CCTG)n Simple_repeat Simple_repeat 1 354 0 498 283 94 29 chr17 54622444 54622635 -34881918 - MIR SINE MIR -6 256 79 2430 140 8 114 chr17 54622635 54622877 -34881676 - MER70A LTR ERVL 0 472 206 1675 144 84 0 chr17 54622877 54623161 -34881392 - AluSx SINE Alu -4 308 1 2430 140 8 114 chr17 54623161 54623208 -34881345 - MER70A LTR ERVL -266 206 156 200 35 35 0 chr17 54623208 54623237 -34881316 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2053 97 0 0 chr17 54623239 54623517 -34881036 - AluY SINE Alu -33 278 1 2430 140 8 114 chr17 54623517 54623668 -34880885 - MER70A LTR ERVL -317 155 90 1929 121 7 0 chr17 54623668 54623949 -34880604 - AluSx SINE Alu -11 301 19 2430 140 8 114 chr17 54623949 54624031 -34880522 - MER70A LTR ERVL -382 90 1 498 283 94 29 chr17 54624031 54624064 -34880489 - MIR SINE MIR -183 79 16 413 177 0 25 chr17 54624268 54624347 -34880206 + FRAM/FAM SINE Alu 8 84 -92 26 64 0 0 chr17 54624734 54624781 -34879772 + GC_rich Low_complexity Low_complexity 1 47 0 203 215 51 76 chr17 54625435 54625514 -34879039 + MIR SINE MIR 114 190 -72 195 100 0 0 chr17 54625538 54625568 -34878985 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 268 200 0 0 chr17 54626156 54626206 -34878347 - L2 LINE L2 0 3272 3223 327 284 79 31 chr17 54626240 54626367 -34878186 + L2 LINE L2 3175 3307 -6 243 291 134 8 chr17 54626619 54626753 -34877800 - L2 LINE L2 -460 2854 2704 286 268 125 9 chr17 54626795 54626907 -34877646 + L1MC4 LINE L1 7416 7540 -502 749 155 8 0 chr17 54626907 54627036 -34877517 - L1MB1 LINE L1 -3 6165 6036 36 53 0 0 chr17 54627037 54627094 -34877459 + AT_rich Low_complexity Low_complexity 1 57 0 1033 223 86 13 chr17 54627094 54627408 -34877145 + L1MC4 LINE L1 7529 7865 -177 355 164 37 2 chr17 54627409 54627542 -34877011 + MER3 DNA MER1_type 41 209 0 * 520 146 11 0 chr17 54627542 54627588 -34876965 - MER3 DNA MER1_type -162 47 1 337 247 112 0 chr17 54627649 54627738 -34876815 + L1MC4 LINE L1 7943 8041 -1 540 288 177 5 chr17 54627738 54627953 -34876600 + MIR SINE MIR 8 259 -3 405 246 134 0 chr17 54628759 54628893 -34875660 + MIR SINE MIR 78 229 -33 652 248 0 0 chr17 54628896 54629021 -34875532 - MER5A DNA MER1_type -4 185 61 294 172 0 0 chr17 54629043 54629066 -34875487 + A-rich Low_complexity Low_complexity 1 23 -35 747 208 0 0 chr17 54629066 54629196 -34875357 + FLAM_A SINE Alu 4 133 0 294 172 0 0 chr17 54629196 54629230 -34875323 + A-rich Low_complexity Low_complexity 22 58 0 259 338 104 52 chr17 54629928 54630082 -34874471 + MIR3 SINE MIR 7 168 -40 236 213 40 13 chr17 54631930 54632005 -34872548 - L1MC4 LINE L1 -1 8041 7965 855 181 0 0 chr17 54632086 54632219 -34872334 + FLAM_C SINE Alu 1 133 0 228 265 41 0 chr17 54632247 54632345 -34872208 - L1MC4 LINE L1 -77 7965 7864 1996 109 13 33 chr17 54632347 54632651 -34871902 + AluSx SINE Alu 1 298 -14 1831 170 17 0 chr17 54632735 54633029 -34871524 - AluJb SINE Alu -11 301 3 265 344 141 0 chr17 54633334 54633462 -34871091 - L2 LINE L2 -2 3270 3125 230 348 22 11 chr17 54633895 54633987 -34870566 + MER5A DNA MER1_type 97 189 0 219 370 65 0 chr17 54634373 54634465 -34870088 - MIR SINE MIR -107 155 58 609 179 0 51 chr17 54634594 54634711 -34869842 - FRAM SINE Alu -36 140 30 543 291 97 4 chr17 54634911 54635148 -34869405 + MLT1I LTR MaLR 151 409 0 469 279 64 86 chr17 54635153 54635457 -34869096 - L1ME4a LINE L1 -93 6028 5719 1404 167 87 47 chr17 54635457 54635757 -34868796 - AluJb SINE Alu 0 312 1 1483 152 0 138 chr17 54635762 54636018 -34868535 - AluJb SINE Alu -8 304 107 1973 138 10 3 chr17 54636018 54636314 -34868239 - AluSg SINE Alu -12 298 1 1483 152 0 138 chr17 54636314 54636405 -34868148 - AluJb SINE Alu -205 107 5 469 279 64 86 chr17 54636405 54636639 -34867914 - L1ME4a LINE L1 -406 5715 5496 2179 109 0 3 chr17 54636685 54636987 -34867566 - AluSg SINE Alu -9 301 1 370 334 102 22 chr17 54637298 54637786 -34866767 - L1ME4a LINE L1 -37 6084 5558 348 240 115 31 chr17 54637851 54637947 -34866606 - HAL1b LINE L1 -58 1290 1187 226 237 61 44 chr17 54637959 54638073 -34866480 - L1ME4a LINE L1 -158 5963 5848 346 221 0 0 chr17 54638271 54638339 -34866214 + L2 LINE L2 3242 3309 -4 278 310 203 6 chr17 54638481 54638639 -34865914 - MER5A DNA MER1_type 0 189 1 375 309 0 18 chr17 54638639 54638749 -34865804 - MIR3 SINE MIR -48 160 53 819 153 0 8 chr17 54638775 54638899 -34865654 - FLAM_C SINE Alu -18 125 3 2054 127 0 0 chr17 54638911 54639218 -34865335 - AluSx SINE Alu 0 307 1 186 133 67 67 chr17 54639864 54639909 -34864644 - MIR SINE MIR -92 170 126 1127 210 54 96 chr17 54642944 54643151 -34861402 + MER33 DNA MER1_type 5 195 -2390 2109 123 0 0 chr17 54643151 54643474 -34861079 + AluSq SINE Alu 1 323 0 1127 210 54 96 chr17 54643474 54643599 -34860954 + MER33 DNA MER1_type 195 324 0 473 239 207 11 chr17 54643610 54643798 -34860755 + MIR SINE MIR 38 262 0 2214 94 7 3 chr17 54645341 54645639 -34858914 + AluSq SINE Alu 1 299 -14 365 200 14 0 chr17 54645751 54645821 -34858732 + MER81 DNA DNA 44 114 0 533 196 98 0 chr17 54646324 54646426 -34858127 - MER81 DNA DNA 0 114 3 243 0 0 0 chr17 54647640 54647667 -34856886 + (TG)n Simple_repeat Simple_repeat 1 27 0 198 0 0 0 chr17 54647666 54647688 -34856865 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 1823 105 7 21 chr17 54648014 54648300 -34856253 + MER1B DNA MER1_type 58 339 0 389 230 30 67 chr17 54648316 54648407 -34856146 - MIR SINE MIR -16 246 160 1445 231 0 22 chr17 54648407 54648719 -34855834 - AluJo SINE Alu -7 305 1 389 230 30 67 chr17 54648719 54648762 -34855791 - MIR SINE MIR -102 160 117 2162 98 0 7 chr17 54649330 54649520 -34855033 - AluSq SINE Alu 0 323 134 2081 104 10 3 chr17 54649520 54649809 -34854744 - AluSg SINE Alu -19 291 1 2162 98 0 7 chr17 54649809 54649943 -34854610 - AluSq SINE Alu -189 134 1 250 247 73 40 chr17 54651404 54651505 -34853048 - MIR SINE MIR -90 118 19 522 278 105 28 chr17 54652294 54652669 -34851884 - L2 LINE L2 -214 3099 2643 1919 144 0 10 chr17 54653141 54653439 -34851114 + AluSx SINE Alu 1 295 -17 802 160 0 0 chr17 54653452 54653577 -34850976 + FLAM_C SINE Alu 10 134 -9 1618 134 8 23 chr17 54653847 54654109 -34850444 + AluJb SINE Alu 50 307 -5 217 245 38 0 chr17 54658116 54658169 -34846384 - L2 LINE L2 -76 3237 3183 331 321 53 0 chr17 54658223 54658354 -34846199 + MIR3 SINE MIR 13 150 -58 410 318 193 25 chr17 54658399 54658720 -34845833 + L2 LINE L2 2897 3271 -1 698 197 88 0 chr17 54658954 54659091 -34845462 - FRAM SINE Alu -33 143 1 300 286 111 24 chr17 54659095 54659221 -34845332 + MIR SINE MIR 111 247 -15 342 292 21 0 chr17 54660128 54660224 -34844329 + MIR SINE MIR 152 249 -13 472 251 129 6 chr17 54660276 54660447 -34844106 + MIR SINE MIR 1 192 -70 206 222 0 37 chr17 54662292 54662346 -34842207 + MIR SINE MIR 190 241 -21 202 229 62 0 chr17 54662317 54662365 -34842188 + L2 LINE L2 3258 3308 -5 * 356 241 184 21 chr17 54662455 54662596 -34841957 + MIR3 SINE MIR 43 206 -2 528 267 14 27 chr17 54662852 54662998 -34841555 + MIR SINE MIR 46 189 -73 25 0 0 0 chr17 54665036 54665061 -34839492 + GC_rich Low_complexity Low_complexity 1 25 0 21 71 0 0 chr17 54665130 54665172 -34839381 + GC_rich Low_complexity Low_complexity 1 42 0 724 275 14 50 chr17 54665571 54665666 -34838887 - MIR SINE MIR -26 236 139 776 173 77 24 chr17 54665666 54665834 -34838719 - MER45A DNA AcHobo 0 178 2 724 275 14 50 chr17 54665834 54665956 -34838597 - MIR SINE MIR -123 139 27 374 220 14 187 chr17 54666540 54666754 -34837799 + MIR SINE MIR 8 184 -78 196 342 108 8 chr17 54667124 54667244 -34837309 + L2 LINE L2 601 732 -2582 451 309 270 17 chr17 54667577 54667814 -34836739 + L2 LINE L2 1798 1974 -1340 2326 89 3 3 chr17 54667814 54668127 -34836426 - AluSp SINE Alu 0 313 1 451 309 270 17 chr17 54668127 54668652 -34835901 + L2 LINE L2 1974 2753 -561 2012 116 18 0 chr17 54668683 54668968 -34835585 + AluSx SINE Alu 1 290 -22 881 125 0 141 chr17 54668972 54669156 -34835397 + AluSg/x SINE Alu 135 292 -18 650 306 58 65 chr17 54669225 54669607 -34834946 + L2 LINE L2 2887 3265 -7 190 250 36 0 chr17 54669663 54669719 -34834834 - L2 LINE L2 -219 3053 2996 322 261 135 18 chr17 54669739 54669850 -34834703 + MIR3 SINE MIR 79 202 -6 237 180 0 0 chr17 54670390 54670440 -34834113 + C-rich Low_complexity Low_complexity 3 52 0 310 227 227 9 chr17 54674223 54674333 -34830220 - MIR SINE MIR -110 152 19 363 269 138 7 chr17 54674690 54674835 -34829718 + MIR SINE MIR 49 212 -50 316 248 25 74 chr17 54675228 54675263 -34829290 - L1M4 LINE L1 -2959 3187 3152 934 121 0 23 chr17 54675263 54675395 -34829158 - FLAM_C SINE Alu -3 130 2 316 248 25 74 chr17 54675395 54675480 -34829073 - L1M4 LINE L1 -2994 3152 3073 1919 146 33 0 chr17 54675482 54675784 -34828769 - AluJb SINE Alu 0 312 1 326 238 38 19 chr17 54675785 54675890 -34828663 + MIR SINE MIR 123 229 -33 299 245 28 126 chr17 54675894 54676037 -34828516 - L2 LINE L2 -65 3248 3120 419 264 69 35 chr17 54676080 54676224 -34828329 + L2 LINE L2 3164 3312 -1 256 295 90 39 chr17 54676203 54676437 -34828116 - L2 LINE L2 -149 3123 2878 * 677 103 162 34 chr17 54676490 54676607 -34827946 - FLAM_C SINE Alu 0 133 2 663 305 76 23 chr17 54676613 54676967 -34827586 - L2 LINE L2 -570 2744 2372 423 129 20 10 chr17 54677761 54677862 -34826691 + (TG)n Simple_repeat Simple_repeat 1 102 0 186 324 59 0 chr17 54679374 54679442 -34825111 - L3b LINE CR1 -200 1383 1312 198 357 71 21 chr17 54680061 54680201 -34824352 - MIR SINE MIR -36 226 80 201 269 0 19 chr17 54680630 54680682 -34823871 + MIR SINE MIR 98 148 -60 243 323 135 50 chr17 54680985 54681267 -34823286 - L2 LINE L2 -2 3311 3006 182 276 35 0 chr17 54681615 54681673 -34822880 + MIR SINE MIR 106 165 -97 195 204 0 0 chr17 54683713 54683767 -34820786 + (CGG)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr17 54684192 54684213 -34820340 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 54684295 54684316 -34820237 + GC_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 54684467 54684495 -34820058 + GC_rich Low_complexity Low_complexity 1 28 0 450 0 0 0 chr17 54687056 54687106 -34817447 + (TG)n Simple_repeat Simple_repeat 2 51 0 223 342 0 0 chr17 54687393 54687472 -34817081 + G-rich Low_complexity Low_complexity 1 79 0 246 192 0 0 chr17 54688049 54688101 -34816452 + (CA)n Simple_repeat Simple_repeat 1 52 0 315 343 48 34 chr17 54689661 54689807 -34814746 - L2 LINE L2 0 3272 3125 243 295 53 32 chr17 54690909 54691004 -34813549 + L2 LINE L2 3209 3305 -8 341 271 39 71 chr17 54691235 54691390 -34813163 + MIR SINE MIR 85 234 -28 250 288 14 0 chr17 54691414 54691487 -34813066 - MIR SINE MIR -56 206 133 260 137 118 0 chr17 54691575 54691626 -34812927 - MIR SINE MIR -63 145 89 422 18 18 0 chr17 54691925 54691980 -34812573 + (TG)n Simple_repeat Simple_repeat 2 57 0 450 0 0 0 chr17 54693513 54693563 -34810990 + (TG)n Simple_repeat Simple_repeat 1 50 0 526 293 55 0 chr17 54694423 54694587 -34809966 + MIR SINE MIR 14 186 -76 991 196 6 0 chr17 54695128 54695301 -34809252 - MER5B DNA MER1_type -3 175 2 274 232 49 146 chr17 54696225 54696389 -34808164 + MIR3 SINE MIR 16 163 -45 497 135 42 21 chr17 54696444 54696540 -34808013 - L1MB8 LINE L1 0 6178 6081 508 200 191 0 chr17 54696813 54696928 -34807625 - MIR SINE MIR -6 256 120 371 311 28 40 chr17 54697019 54697196 -34807357 - MIR SINE MIR -59 203 29 261 221 53 53 chr17 54697940 54698035 -34806518 - MIR SINE MIR -112 150 56 626 331 19 15 chr17 54698205 54698465 -34806088 + MIR SINE MIR 2 262 0 264 59 0 0 chr17 54698861 54698895 -34805658 + (CCA)n Simple_repeat Simple_repeat 2 35 0 275 289 20 25 chr17 54699374 54699509 -34805044 + MIR SINE MIR 32 143 -65 400 387 42 24 chr17 54699555 54699767 -34804786 - MIR SINE MIR 0 262 47 216 278 70 26 chr17 54700098 54700213 -34804340 + MIR3 SINE MIR 51 170 -38 403 260 0 82 chr17 54700465 54700661 -34803892 + (TG)n Simple_repeat Simple_repeat 1 180 0 216 344 21 0 chr17 54700683 54700779 -34803774 + (TG)n Simple_repeat Simple_repeat 2 99 0 191 314 0 0 chr17 54700876 54700927 -34803626 - MIR3 SINE MIR -14 194 144 834 236 129 15 chr17 54702109 54702372 -34802181 + L3 LINE CR1 1133 1425 -152 305 275 27 27 chr17 54703949 54704098 -34800455 + (CAGAGA)n Simple_repeat Simple_repeat 3 151 0 322 288 26 13 chr17 54704123 54704276 -34800277 + (CAGAGA)n Simple_repeat Simple_repeat 3 157 0 1189 198 19 5 chr17 54704852 54705059 -34799494 + MER63A DNA MER1_type 1 210 0 416 174 25 50 chr17 54705151 54705272 -34799281 - L2 LINE L2 -190 3082 2965 269 343 157 13 chr17 54707058 54707370 -34797183 - L2 LINE L2 -924 2390 2034 917 206 0 0 chr17 54708115 54708285 -34796268 - FRAM SINE Alu -8 168 1 237 317 125 38 chr17 54709075 54709419 -34795134 + L2 LINE L2 2600 2973 -341 375 277 62 15 chr17 54709587 54709717 -34794836 - MIR SINE MIR -66 196 61 244 344 73 47 chr17 54710190 54710382 -34794171 + MIR SINE MIR 60 256 -6 302 239 102 23 chr17 54711046 54711134 -34793419 - L1MB8 LINE L1 -1 6177 6083 224 276 26 13 chr17 54712681 54712757 -34791796 - MIR SINE MIR -91 117 41 333 0 0 0 chr17 54712886 54712923 -34791630 + (TG)n Simple_repeat Simple_repeat 2 38 0 385 337 117 10 chr17 54717493 54717698 -34786855 + MIR SINE MIR 36 262 0 233 307 139 0 chr17 54720084 54720185 -34784368 + MIR SINE MIR 33 147 -61 692 244 131 27 chr17 54720218 54720439 -34784114 - MIR SINE MIR 0 262 19 27 0 0 0 chr17 54720441 54720468 -34784085 + AT_rich Low_complexity Low_complexity 1 27 0 5376 121 21 45 chr17 54720468 54720997 -34783556 - L1MA7 LINE L1 0 6291 5751 207 0 0 0 chr17 54720997 54721020 -34783533 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1945 113 0 18 chr17 54721027 54721302 -34783251 - AluSx SINE Alu -42 270 1 5376 121 21 45 chr17 54721302 54721721 -34782832 - L1MA7 LINE L1 -546 5745 5360 1960 114 39 4 chr17 54721721 54722001 -34782552 - AluSx SINE Alu -22 290 1 5376 121 21 45 chr17 54722001 54722088 -34782465 - L1MA7 LINE L1 -931 5360 5272 678 241 23 11 chr17 54722128 54722302 -34782251 - MIR SINE MIR -79 183 8 292 303 0 25 chr17 54723393 54723515 -34781038 + G-rich Low_complexity Low_complexity 2 120 0 191 351 11 21 chr17 54724792 54724886 -34779667 + L2 LINE L2 408 500 -2814 615 286 11 22 chr17 54728239 54728421 -34776132 + MIR SINE MIR 11 190 -72 752 185 34 0 chr17 54728428 54728574 -34775979 - MER5A DNA MER1_type 0 189 39 308 218 4 0 chr17 54729208 54729285 -34775268 - MIR SINE MIR -69 139 59 * 377 290 62 65 chr17 54729271 54729472 -34775081 + MIR SINE MIR 10 204 -42 661 248 57 102 chr17 54730096 54730195 -34774358 + MER102b DNA MER1_type 14 116 -1312 1681 152 45 7 chr17 54730195 54730484 -34774069 + AluJo SINE Alu 1 300 -12 661 248 57 102 chr17 54730484 54730719 -34773834 + MER102b DNA MER1_type 116 333 -8 216 0 0 0 chr17 54731499 54731523 -34773030 + (TA)n Simple_repeat Simple_repeat 2 25 0 189 154 0 0 chr17 54731536 54731575 -34772978 + A-rich Low_complexity Low_complexity 1 39 0 205 294 0 20 chr17 54731876 54731978 -34772575 + (TCTCTG)n Simple_repeat Simple_repeat 4 103 0 2487 74 0 0 chr17 54733947 54734257 -34770296 + AluSg SINE Alu 1 310 0 389 217 54 0 chr17 54735042 54735134 -34769419 - MER5A DNA MER1_type 0 189 93 212 319 101 17 chr17 54736103 54736222 -34768331 + MIR3 SINE MIR 35 163 -45 459 261 134 0 chr17 54738573 54738730 -34765823 - MIR SINE MIR -29 233 56 271 287 167 0 chr17 54738726 54738834 -34765719 - L2 LINE L2 -1 3312 3187 * 286 337 12 0 chr17 54738894 54738980 -34765573 + MIR3 SINE MIR 110 196 -12 959 159 36 31 chr17 54739610 54739805 -34764748 + MIR SINE MIR 7 202 -60 240 35 0 0 chr17 54739819 54739848 -34764705 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1445 178 0 31 chr17 54739848 54740107 -34764446 - AluJb SINE Alu -46 266 16 214 259 37 0 chr17 54740111 54740165 -34764388 + MIR SINE MIR 197 252 -10 311 257 166 9 chr17 54740197 54740344 -34764209 + MIR3 SINE MIR 20 196 -12 253 309 14 29 chr17 54742345 54742484 -34762069 + CT-rich Low_complexity Low_complexity 3 139 0 225 200 20 0 chr17 54742492 54742542 -34762011 + (TG)n Simple_repeat Simple_repeat 2 52 0 1872 136 0 52 chr17 54746065 54746375 -34758178 - AluJb SINE Alu -8 304 11 453 319 0 0 chr17 54747579 54747695 -34756858 - L2 LINE L2 -1 3312 3197 209 301 136 0 chr17 54747702 54747805 -34756748 - MIR SINE MIR -62 146 30 2257 80 23 0 chr17 54747926 54748225 -34756328 - AluSp SINE Alu -7 306 1 348 307 152 64 chr17 54748337 54748666 -34755887 - L2 LINE L2 -2 3270 2913 219 152 0 0 chr17 54750375 54750421 -34754132 + (TA)n Simple_repeat Simple_repeat 1 46 0 312 178 0 0 chr17 54750575 54750648 -34753905 + (TG)n Simple_repeat Simple_repeat 2 74 0 486 247 29 38 chr17 54752992 54753178 -34751375 - MIR SINE MIR -64 198 13 540 276 157 11 chr17 54754998 54755284 -34749269 - L2 LINE L2 -2 3270 2943 201 381 38 9 chr17 54755387 54755492 -34749061 + MIR SINE MIR 79 186 -76 284 333 101 14 chr17 54756062 54756200 -34748353 - MIR3 SINE MIR -4 204 55 268 356 11 0 chr17 54756196 54756283 -34748270 - L2 LINE L2 -76 3196 3109 * 408 285 56 56 chr17 54757047 54757226 -34747327 - MIR SINE MIR -6 256 78 290 220 17 0 chr17 54757413 54757472 -34747081 - MIR SINE MIR -59 149 90 489 239 26 0 chr17 54758585 54758698 -34745855 - MIR3 SINE MIR -39 169 54 948 195 6 0 chr17 54758711 54758875 -34745678 + FRAM SINE Alu 1 165 -1 290 276 92 13 chr17 54759792 54759944 -34744609 - MIR3 SINE MIR 0 208 45 204 325 0 12 chr17 54759906 54759986 -34744567 + MIR SINE MIR 19 97 -111 * 237 295 29 67 chr17 54760612 54760717 -34743836 + MIR SINE MIR 117 217 -45 502 231 39 15 chr17 54761332 54761462 -34743091 + L3 LINE CR1 1373 1505 -72 349 246 0 0 chr17 54761765 54761834 -34742719 + MIR SINE MIR 56 124 -84 2283 112 0 0 chr17 54762734 54763037 -34741516 - AluSx SINE Alu -9 303 1 1924 127 0 14 chr17 54763482 54763774 -34740779 - AluSx SINE Alu -2 310 23 184 250 60 103 chr17 54764339 54764455 -34740098 + L3 LINE CR1 561 671 -906 483 258 13 38 chr17 54764578 54764737 -34739816 - L2 LINE L2 0 3313 3159 1666 109 4 9 chr17 54764737 54764967 -34739586 + AluJb SINE Alu 1 229 -83 608 282 103 34 chr17 54765019 54765281 -34739272 - L2 LINE L2 -777 2537 2258 265 327 18 64 chr17 54765574 54765684 -34738869 - MIR SINE MIR -102 160 56 189 312 92 43 chr17 54765841 54765982 -34738571 + MIR SINE MIR 34 181 -81 256 337 30 0 chr17 54766465 54766566 -34737987 + L2 LINE L2 3153 3256 -16 2404 87 0 0 chr17 54767004 54767313 -34737240 + AluSg SINE Alu 1 309 -1 2154 122 0 0 chr17 54767403 54767706 -34736847 + AluSx SINE Alu 1 303 -9 2454 68 0 0 chr17 54767710 54768019 -34736534 + AluY SINE Alu 1 309 -2 1320 192 0 112 chr17 54768028 54768367 -34736186 + AluSx SINE Alu 2 302 0 1524 163 8 11 chr17 54768580 54768844 -34735709 - AluJo SINE Alu -20 292 30 1168 257 94 60 chr17 54768870 54769675 -34734878 - L2 LINE L2 -1 3312 2005 325 216 26 74 chr17 54769728 54769841 -34734712 - MIR SINE MIR -25 183 71 258 273 82 36 chr17 54769801 54769845 -34734708 + MIR SINE MIR 13 54 -208 * 2292 95 3 0 chr17 54769845 54770150 -34734403 - AluSg SINE Alu -4 306 1 258 273 82 36 chr17 54770150 54770215 -34734338 + MIR SINE MIR 54 127 -135 345 333 148 30 chr17 54770280 54770685 -34733868 - L2 LINE L2 -871 2443 1991 2070 114 3 3 chr17 54770729 54771027 -34733526 + AluSx SINE Alu 1 298 -14 505 220 84 61 chr17 54771040 54771254 -34733299 + HAL1 LINE L1 1 219 -2288 252 221 44 0 chr17 54771441 54771509 -34733044 + HAL1 LINE L1 540 610 -1897 2237 98 10 0 chr17 54771806 54772102 -34732451 + AluSx SINE Alu 1 299 -13 825 241 74 36 chr17 54772128 54772526 -34732027 - MER57A LTR ERV1 0 403 54 676 134 23 11 chr17 54772563 54772743 -34731810 + GA-rich Low_complexity Low_complexity 1 182 0 608 234 30 56 chr17 54772771 54773008 -34731545 - MER57A-int LTR ERV1 -2229 4102 2469 526 227 92 107 chr17 54772995 54773109 -34731444 - MER57A-int LTR ERV1 -2550 2573 2459 * 2092 81 0 4 chr17 54773109 54773380 -34731173 - AluSq SINE Alu -43 270 1 526 227 92 107 chr17 54773380 54773757 -34730796 - MER57A-int LTR ERV1 -2664 2459 2065 2132 128 3 0 chr17 54773757 54774062 -34730491 + AluSx SINE Alu 1 306 -6 526 227 92 107 chr17 54774062 54774265 -34730288 - MER57A-int LTR ERV1 -3058 2065 1860 543 114 0 79 chr17 54774345 54774414 -34730139 - MER34 LTR ERV1 -305 237 179 1829 144 13 10 chr17 54774414 54774713 -34729840 + AluJb SINE Alu 1 300 -12 543 114 0 79 chr17 54774713 54774757 -34729796 - MER34 LTR ERV1 -363 179 133 843 254 87 28 chr17 54774757 54775383 -34729170 - MER57A-int LTR ERV1 -2903 1968 888 326 238 0 0 chr17 54775740 54775803 -34728750 - MER57A-int LTR ERV1 -7238 299 237 2285 100 6 0 chr17 54776037 54776348 -34728205 + AluSq SINE Alu 1 313 0 581 235 135 87 chr17 54776352 54776442 -34728111 - MER57A LTR ERV1 -4 399 315 2246 102 0 7 chr17 54776442 54776746 -34727807 + AluSq SINE Alu 1 302 -11 581 235 135 87 chr17 54776746 54777034 -34727519 - MER57A LTR ERV1 -88 315 3 393 261 193 14 chr17 54777086 54777293 -34727260 + L1ME4a LINE L1 5878 6121 0 576 239 9 0 chr17 54777435 54777548 -34727005 + MER81 DNA DNA 1 114 0 187 336 0 84 chr17 54777570 54777677 -34726876 - MIR SINE MIR -55 207 110 2314 77 0 26 chr17 54777784 54778095 -34726458 + AluY SINE Alu 1 303 -8 2400 68 3 0 chr17 54778100 54778408 -34726145 + AluSc SINE Alu 1 309 0 312 289 10 19 chr17 54778484 54778588 -34725965 + L1ME1 LINE L1 6064 6166 0 2050 90 38 14 chr17 54779034 54779048 -34725505 - AluSx SINE Alu -17 295 283 194 0 0 37 chr17 54779048 54779075 -34725478 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2050 90 38 14 chr17 54779075 54779348 -34725205 - AluSx SINE Alu -29 283 1 337 357 32 6 chr17 54780695 54780852 -34723701 + MIR SINE MIR 70 230 -32 433 308 53 72 chr17 54782546 54782676 -34721877 - MIR SINE MIR -3 259 135 1889 168 0 3 chr17 54782676 54782973 -34721580 + AluJo SINE Alu 1 296 -16 433 308 53 72 chr17 54782973 54783105 -34721448 - MIR SINE MIR -127 135 2 671 274 63 25 chr17 54784269 54784506 -34720047 - MIR SINE MIR -6 256 11 302 331 132 55 chr17 54784623 54784880 -34719673 - L2 LINE L2 0 3272 2996 212 300 57 52 chr17 54785172 54785382 -34719171 - L2 LINE L2 -818 2496 2286 1491 177 0 4 chr17 54785391 54785640 -34718913 + AluJo SINE Alu 64 311 -1 1061 180 12 0 chr17 54787160 54787332 -34717221 + FAM SINE Alu 2 175 0 2402 88 0 0 chr17 54787396 54787704 -34716849 + AluSg SINE Alu 1 308 -2 187 340 202 0 chr17 54788393 54788487 -34716066 - MIR SINE MIR -55 153 41 2257 103 0 19 chr17 54788573 54788885 -34715668 - AluSx SINE Alu -6 306 1 814 292 31 72 chr17 54788974 54789163 -34715390 + L2 LINE L2 2851 3046 -267 2264 79 3 0 chr17 54789163 54789455 -34715098 + AluSp SINE Alu 1 293 -20 814 292 31 72 chr17 54789455 54789748 -34714805 + L2 LINE L2 3046 3313 0 215 406 52 19 chr17 54789756 54789911 -34714642 - L2 LINE L2 -38 3234 3075 1778 169 0 3 chr17 54789911 54790206 -34714347 + AluJo SINE Alu 1 294 -18 180 125 0 0 chr17 54790222 54790254 -34714299 + (GAA)n Simple_repeat Simple_repeat 2 33 0 200 338 14 21 chr17 54791556 54791701 -34712852 + CT-rich Low_complexity Low_complexity 1 144 0 * 214 245 0 109 chr17 54791620 54791767 -34712786 + C-rich Low_complexity Low_complexity 2 132 0 203 279 88 15 chr17 54792575 54792643 -34711910 - L2 LINE L2 0 3272 3200 1591 188 52 0 chr17 54792766 54793054 -34711499 - AluJo SINE Alu -9 303 1 2011 123 3 3 chr17 54793063 54793355 -34711198 - AluSx SINE Alu -20 292 1 566 260 143 50 chr17 54793416 54793716 -34710837 - L2 LINE L2 -1 3312 2985 2503 124 25 58 chr17 54793911 54793973 -34710580 - L1MB2 LINE L1 -2 6169 6106 1821 144 0 21 chr17 54793973 54794257 -34710296 + AluSx SINE Alu 29 306 -6 2503 124 25 58 chr17 54794257 54794445 -34710108 - L1MB2 LINE L1 -65 6106 5938 2530 155 11 52 chr17 54794445 54794676 -34709877 - MSTC LTR MaLR 0 428 222 2166 110 3 25 chr17 54794676 54794995 -34709558 - AluSx SINE Alu 0 312 1 2530 155 11 52 chr17 54794995 54795209 -34709344 - MSTC LTR MaLR -206 222 1 2503 124 25 58 chr17 54795209 54795402 -34709151 - L1MB2 LINE L1 -233 5938 5740 1532 153 32 58 chr17 54795551 54795859 -34708694 + AluSx SINE Alu 1 300 -12 2208 85 0 0 chr17 54796874 54797335 -34707218 - AluSc SINE Alu 0 464 4 351 262 47 0 chr17 54797453 54797560 -34706993 - L2 LINE L2 -2 3311 3200 2294 90 0 0 chr17 54797772 54798071 -34706482 - AluSg SINE Alu -11 299 1 210 345 0 0 chr17 54798079 54798134 -34706419 - MIR SINE MIR -200 62 8 379 221 10 29 chr17 54799715 54799819 -34704734 + MIR SINE MIR 100 201 -61 2049 103 11 0 chr17 54799882 54800155 -34704398 - AluSx SINE Alu -36 276 1 2148 101 10 0 chr17 54801614 54801911 -34702642 + AluSx SINE Alu 1 300 -12 266 250 0 0 chr17 54802315 54802367 -34702186 - MER5A DNA MER1_type -83 106 55 526 271 108 6 chr17 54802373 54802539 -34702014 + MER5A DNA MER1_type 4 186 -3 313 334 83 51 chr17 54802982 54803356 -34701197 - L2 LINE L2 0 3272 2887 1327 351 112 12 chr17 54803380 54803766 -34700787 + L2 LINE L2 771 1117 -2197 2114 119 0 3 chr17 54803766 54804061 -34700492 + AluSx SINE Alu 1 294 -18 1327 351 112 12 chr17 54804061 54804797 -34699756 + L2 LINE L2 1117 2005 -1309 704 242 79 6 chr17 54805090 54805255 -34699298 + MER45A DNA AcHobo 1 177 -1 953 236 103 54 chr17 54805267 54805832 -34698721 + L2 LINE L2 2647 3294 -19 1674 168 0 27 chr17 54805897 54806194 -34698359 + AluJo SINE Alu 6 294 -18 697 155 0 26 chr17 54806195 54806311 -34698242 + AluJo/FRAM SINE Alu 134 246 -66 24 0 0 0 chr17 54806317 54806341 -34698212 + AT_rich Low_complexity Low_complexity 1 24 0 437 286 138 20 chr17 54807977 54808173 -34696380 - MIR SINE MIR -16 246 28 477 257 22 7 chr17 54808305 54808406 -34696147 + MIR SINE MIR 75 180 -82 1176 161 82 30 chr17 54808406 54808710 -34695843 - MER33 DNA MER1_type -4 320 1 477 257 22 7 chr17 54808710 54808744 -34695809 + MIR SINE MIR 180 212 -50 216 182 0 0 chr17 54808778 54808822 -34695731 + CT-rich Low_complexity Low_complexity 1 44 0 2242 107 7 0 chr17 54808887 54809178 -34695375 + AluSx SINE Alu 1 293 -19 433 137 0 0 chr17 54810916 54810989 -34693564 - AluSx SINE Alu 0 312 240 1527 59 16 5 chr17 54810997 54811183 -34693370 - AluSx SINE Alu -124 188 1 246 221 286 0 chr17 54811491 54811568 -34692985 + MIR SINE MIR 80 178 -84 1871 144 46 0 chr17 54811578 54811699 -34692854 + AluSx SINE Alu 1 115 -197 221 0 0 33 chr17 54811699 54811729 -34692824 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1871 144 46 0 chr17 54811729 54811891 -34692662 + AluSx SINE Alu 115 297 -15 1951 103 66 0 chr17 54811901 54812173 -34692380 + AluSx SINE Alu 8 297 -15 264 30 0 0 chr17 54813588 54813621 -34690932 + (CAG)n Simple_repeat Simple_repeat 2 34 0 358 172 97 0 chr17 54814333 54814426 -34690127 - MIR SINE MIR -73 135 34 22 0 0 0 chr17 54816176 54816198 -34688355 + AT_rich Low_complexity Low_complexity 1 22 0 2307 113 3 0 chr17 54816822 54817123 -34687430 + AluSx SINE Alu 1 302 -10 846 126 0 8 chr17 54818060 54818179 -34686374 + FLAM_C SINE Alu 1 118 -15 560 80 9 142 chr17 54819617 54819730 -34684823 + HY3 scRNA scRNA 1 98 -3 2067 159 124 101 chr17 54820844 54821466 -34683087 + L1MC4 LINE L1 6521 7156 -886 572 187 19 218 chr17 54821470 54821831 -34682722 + L1MC4 LINE L1 7528 7797 -245 2179 113 0 60 chr17 54821831 54822150 -34682403 + AluSx SINE Alu 1 300 -12 572 187 19 218 chr17 54822150 54822205 -34682348 + L1MC4 LINE L1 7797 7861 -181 295 237 86 11 chr17 54822209 54822302 -34682251 + L1MC4 LINE L1 7939 8038 -4 207 0 0 0 chr17 54822833 54822856 -34681697 + (CAT)n Simple_repeat Simple_repeat 3 25 0 21 71 0 0 chr17 54823014 54823056 -34681497 + AT_rich Low_complexity Low_complexity 1 42 0 2455 85 3 0 chr17 54823136 54823442 -34681111 + AluSp SINE Alu 2 308 -5 2181 117 17 0 chr17 54825096 54825386 -34679167 + AluSx SINE Alu 1 295 -17 432 229 83 18 chr17 54826197 54826306 -34678247 - MIR SINE MIR 0 262 147 1793 255 70 35 chr17 54826316 54827182 -34677371 - L2 LINE L2 -115 3198 2317 2452 85 3 3 chr17 54827206 54827512 -34677041 + AluSq SINE Alu 1 306 -7 506 211 50 157 chr17 54827575 54827806 -34676747 + MIR SINE MIR 10 207 -55 2486 58 0 22 chr17 54827806 54828117 -34676436 + AluY SINE Alu 1 304 -7 506 211 50 157 chr17 54828117 54828165 -34676388 + MIR SINE MIR 207 259 -3 893 107 0 8 chr17 54828496 54828618 -34675935 - FLAM_C SINE Alu -8 125 5 2159 124 3 0 chr17 54828634 54828932 -34675621 - AluSg SINE Alu -11 299 1 218 242 121 71 chr17 54828942 54829041 -34675512 + MIR SINE MIR 29 117 -91 2182 80 0 4 chr17 54829099 54829361 -34675192 - AluSc SINE Alu -16 293 33 1947 108 45 54 chr17 54829592 54829906 -34674647 + AluJb SINE Alu 1 311 -1 31 88 0 0 chr17 54830643 54830723 -34673830 + GC_rich Low_complexity Low_complexity 1 80 0 2022 136 3 7 chr17 54832167 54832475 -34672078 - AluSx SINE Alu -5 307 1 204 54 27 27 chr17 54832475 54832512 -34672041 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2512 77 0 13 chr17 54832560 54832872 -34671681 - AluSp SINE Alu -5 308 1 367 316 77 0 chr17 54833165 54833282 -34671271 - L2 LINE L2 -8 3264 3139 879 289 35 0 chr17 54833319 54833520 -34671033 + MIR SINE MIR 1 208 -54 522 226 118 98 chr17 54833802 54833927 -34670626 - MIR SINE MIR -34 228 95 1460 98 209 8 chr17 54833927 54834188 -34670365 + AluSg1 SINE Alu 1 308 0 522 226 118 98 chr17 54834188 54834265 -34670288 - MIR SINE MIR -167 95 21 412 273 36 42 chr17 54834278 54834443 -34670110 - L2 LINE L2 -996 2318 2155 2295 103 3 0 chr17 54834448 54834749 -34669804 + AluSx SINE Alu 2 303 -9 623 195 0 18 chr17 54834763 54834876 -34669677 + FLAM_A SINE Alu 1 111 -31 21 0 0 0 chr17 54834906 54834927 -34669626 + AT_rich Low_complexity Low_complexity 1 21 0 1825 135 61 52 chr17 54834952 54835232 -34669321 + MER47A DNA MER2_type 1 286 -2037 1903 142 46 33 chr17 54835232 54835273 -34669280 - THE1C LTR MaLR 0 375 336 2093 132 0 16 chr17 54835273 54835583 -34668970 + AluSx SINE Alu 1 305 -7 1903 142 46 33 chr17 54835583 54835907 -34668646 - THE1C LTR MaLR -39 336 5 1825 135 61 52 chr17 54835907 54835989 -34668564 + MER47A DNA MER2_type 286 366 0 339 292 127 34 chr17 54835993 54836229 -34668324 - L2 LINE L2 -1193 2121 1864 1363 199 7 24 chr17 54836248 54836545 -34668008 - MLT1A1 LTR MaLR -2 363 72 350 58 0 0 chr17 54836543 54836595 -34667958 - AluJb SINE Alu 0 302 251 * 180 0 0 0 chr17 54836627 54836647 -34667906 + (CAA)n Simple_repeat Simple_repeat 2 21 0 260 200 0 0 chr17 54836833 54836883 -34667670 + AluSg/x SINE Alu 144 193 -109 210 37 0 0 chr17 54837114 54837141 -34667412 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1428 174 32 4 chr17 54837148 54837401 -34667152 - AluJb SINE Alu -52 260 1 1998 129 0 51 chr17 54837463 54837774 -34666779 + AluSx SINE Alu 1 295 -17 1585 193 32 69 chr17 54837882 54838287 -34666266 - MLT1B LTR MaLR 0 390 1 1991 124 32 3 chr17 54838287 54838570 -34665983 - AluSg SINE Alu -16 294 4 1984 145 3 3 chr17 54838962 54839251 -34665302 - AluJo SINE Alu -21 291 3 321 246 99 42 chr17 54839277 54839419 -34665134 + L2 LINE L2 3121 3270 -2 2380 89 0 0 chr17 54839523 54839816 -34664737 - AluY SINE Alu -18 293 1 252 292 169 54 chr17 54839862 54840016 -34664537 + L2 LINE L2 1398 1533 -1781 1834 128 16 46 chr17 54840016 54840320 -34664233 - AluSx SINE Alu -15 297 3 252 292 169 54 chr17 54840320 54840425 -34664128 + L2 LINE L2 1533 1687 -1627 694 187 8 15 chr17 54840461 54840595 -34663958 - FLAM_C SINE Alu 0 133 1 2124 79 52 31 chr17 54840633 54840924 -34663629 + AluSx SINE Alu 11 307 -5 2091 115 0 14 chr17 54840997 54841293 -34663260 + AluJb SINE Alu 1 292 -20 590 165 239 74 chr17 54841317 54841493 -34663060 - MIR SINE MIR -51 211 7 258 209 254 36 chr17 54841546 54841656 -34662897 + L2 LINE L2 3139 3272 0 366 23 0 0 chr17 54841661 54841673 -34662880 + (TG)n Simple_repeat Simple_repeat 1 55 0 366 23 0 0 chr17 54841673 54841716 -34662837 + (TG)n Simple_repeat Simple_repeat 2 44 0 2551 68 3 0 chr17 54841741 54842049 -34662504 - AluSp SINE Alu -4 309 1 236 108 0 0 chr17 54844123 54844160 -34660393 - LTR10D LTR ERV1 0 513 477 251 261 35 131 chr17 54845001 54845162 -34659391 + MER5A DNA MER1_type 10 150 -39 2484 72 0 3 chr17 54845162 54845469 -34659084 - AluSc SINE Alu -3 306 1 251 261 35 131 chr17 54845469 54845506 -34659047 + MER5A DNA MER1_type 150 189 0 1957 110 73 0 chr17 54846635 54846908 -34657645 - AluSx SINE Alu -19 293 1 346 202 154 69 chr17 54847016 54847215 -34657338 - L1MC5 LINE L1 -58 7903 7680 2021 136 13 3 chr17 54847215 54847517 -34657036 + AluSx SINE Alu 1 305 -7 346 202 154 69 chr17 54847517 54847550 -34657003 - L1MC5 LINE L1 -281 7680 7651 315 0 0 0 chr17 54847585 54847620 -34656933 + (TG)n Simple_repeat Simple_repeat 2 36 0 2140 114 13 19 chr17 54847723 54848031 -34656522 - AluSx SINE Alu -6 306 1 2423 80 0 3 chr17 54848101 54848400 -34656153 + AluSx SINE Alu 1 298 -14 3415 138 68 48 chr17 54848576 54849136 -34655417 + Tigger2 DNA MER2_type 2 582 -2136 2133 136 7 0 chr17 54849136 54849445 -34655108 - AluSx SINE Alu -1 311 1 3415 138 68 48 chr17 54849445 54849618 -34654935 + Tigger2 DNA MER2_type 582 750 -1968 743 122 7 75 chr17 54849746 54849781 -34654772 + Tigger2 DNA MER2_type 2509 2545 -173 2334 92 3 0 chr17 54849781 54850075 -34654478 + AluSx SINE Alu 1 295 -17 743 122 7 75 chr17 54850075 54850186 -34654367 + Tigger2 DNA MER2_type 2545 2645 -73 1106 159 168 4 chr17 54850204 54850436 -34654117 - MSTB1 LTR MaLR -18 414 145 2320 61 6 45 chr17 54850797 54851108 -34653445 + AluY SINE Alu 1 299 -12 24 53 0 0 chr17 54851354 54851392 -34653161 + AT_rich Low_complexity Low_complexity 1 38 0 2102 135 0 3 chr17 54851524 54851827 -34652726 - AluSx SINE Alu -10 302 1 4064 166 54 16 chr17 54851939 54852729 -34651824 - MER6 DNA MER2_type 0 865 46 485 58 14 0 chr17 54852858 54852927 -34651626 + (TA)n Simple_repeat Simple_repeat 2 71 0 1546 134 20 81 chr17 54852947 54853245 -34651308 - AluJo SINE Alu -32 280 1 1476 120 71 0 chr17 54853287 54853512 -34651041 + AluSg/x SINE Alu 66 306 -4 2155 123 7 3 chr17 54853632 54853932 -34650621 + AluSx SINE Alu 1 301 -11 2197 109 10 0 chr17 54854148 54854441 -34650112 - AluSx SINE Alu -16 296 1 2560 140 46 21 chr17 54854848 54855283 -34649270 - LTR47A LTR ERVL -6 446 1 1416 173 50 54 chr17 54855378 54855655 -34648898 - AluJb SINE Alu -36 276 1 755 232 7 0 chr17 54855707 54855862 -34648691 - AluJb SINE Alu -8 304 149 1097 98 78 0 chr17 54856218 54856371 -34648182 - AluY SINE Alu -13 298 134 2509 45 0 3 chr17 54856372 54856663 -34647890 - AluY SINE Alu -9 302 13 21 36 0 0 chr17 54856709 54856737 -34647816 + AT_rich Low_complexity Low_complexity 1 28 0 2407 84 3 0 chr17 54857143 54857440 -34647113 - AluSp SINE Alu -15 298 1 920 182 6 23 chr17 54857448 54857624 -34646929 - FAM SINE Alu -2 173 1 2260 99 17 0 chr17 54857928 54858230 -34646323 + AluSp SINE Alu 3 309 -4 1847 163 26 13 chr17 54858464 54858771 -34645782 - AluJb SINE Alu -1 311 1 2039 140 0 14 chr17 54858824 54859117 -34645436 + AluSx SINE Alu 1 289 -23 646 244 19 13 chr17 54859314 54859470 -34645083 + AluJo SINE Alu 29 185 -127 715 308 60 30 chr17 54860171 54860505 -34644048 + HAL1 LINE L1 5 348 -2159 1093 157 89 5 chr17 54860518 54860709 -34643844 - MER20 DNA MER1_type 0 219 13 750 154 52 7 chr17 54860808 54860944 -34643609 - MER105 DNA DNA -24 180 39 1771 272 161 54 chr17 54861063 54862351 -34642202 + HAL1 LINE L1 591 2017 -490 1824 155 0 7 chr17 54862356 54862640 -34641913 + AluSx SINE Alu 14 295 -17 257 244 231 0 chr17 54862756 54862912 -34641641 + HAL1 LINE L1 2284 2475 -32 2190 107 3 3 chr17 54863544 54863833 -34640720 - AluSx SINE Alu -23 289 1 1516 206 33 0 chr17 54864776 54865048 -34639505 + AluJb SINE Alu 1 281 -31 211 238 0 0 chr17 54865048 54865090 -34639463 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 1622 194 61 85 chr17 54865094 54865347 -34639206 + L1ME1 LINE L1 5367 5624 -542 2101 126 14 0 chr17 54865347 54865632 -34638921 - AluSx SINE Alu -23 289 1 1622 194 61 85 chr17 54865632 54866036 -34638517 + L1ME1 LINE L1 5624 5981 -185 641 96 138 0 chr17 54866079 54866173 -34638380 + FLAM_C SINE Alu 11 117 -26 2056 122 0 24 chr17 54866191 54866479 -34638074 - AluSx SINE Alu -31 281 1 1075 142 25 0 chr17 54867792 54867954 -34636599 - AluSc SINE Alu -14 295 130 222 37 0 0 chr17 54867954 54867981 -34636572 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1834 111 63 11 chr17 54867981 54868251 -34636302 - AluSx SINE Alu -28 284 1 278 174 10 41 chr17 54868750 54868848 -34635705 + GA-rich Low_complexity Low_complexity 3 97 0 243 88 0 0 chr17 54870187 54870221 -34634332 + (T)n Simple_repeat Simple_repeat 1 34 0 24 53 0 0 chr17 54870391 54870429 -34634124 + AT_rich Low_complexity Low_complexity 1 38 0 1702 170 10 27 chr17 54871297 54871597 -34632956 - AluJb SINE Alu -17 295 1 21 0 0 0 chr17 54871810 54871831 -34632722 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr17 54875292 54875318 -34629235 + AT_rich Low_complexity Low_complexity 1 26 0 476 266 133 9 chr17 54877223 54877441 -34627112 - L1MC5 LINE L1 -31 7930 7686 672 284 117 42 chr17 54878655 54879177 -34625376 + L1ME3A LINE L1 5610 6170 0 1873 128 14 17 chr17 54879302 54879598 -34624955 - AluSx SINE Alu -17 295 1 277 22 0 22 chr17 54879641 54879686 -34624867 + AluY SINE Alu 258 301 0 2194 95 10 10 chr17 54880482 54880777 -34623776 + AluSg SINE Alu 1 295 -15 2076 104 14 14 chr17 54880779 54881076 -34623477 + AluSg SINE Alu 1 297 -13 1434 163 54 23 chr17 54881227 54881485 -34623068 + AluSx SINE Alu 1 266 -46 440 149 0 0 chr17 54881514 54881588 -34622965 - FLAM_A SINE Alu 0 142 69 789 107 9 0 chr17 54882310 54882422 -34622131 + AluJo/FLAM SINE Alu 2 114 -198 1248 109 0 0 chr17 54882422 54882587 -34621966 - AluSg/x SINE Alu -14 298 134 24 0 0 0 chr17 54882596 54882620 -34621933 + AT_rich Low_complexity Low_complexity 1 24 0 2294 106 0 0 chr17 54882623 54882925 -34621628 + AluSx SINE Alu 1 302 -10 2107 101 31 3 chr17 54883029 54883317 -34621236 + AluSx SINE Alu 1 296 -16 2234 103 45 0 chr17 54883329 54883620 -34620933 + AluSx SINE Alu 3 306 -6 198 0 0 0 chr17 54884007 54884029 -34620524 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2012 100 3 31 chr17 54884032 54884322 -34620231 - AluSx SINE Alu -30 282 1 2051 94 7 68 chr17 54884587 54884896 -34619657 - AluSx SINE Alu -22 290 1 1765 133 75 25 chr17 54884915 54885193 -34619360 - AluJb SINE Alu -19 293 2 1309 168 111 4 chr17 54885305 54885567 -34618986 + AluJo SINE Alu 15 304 -8 2237 96 0 7 chr17 54885876 54886168 -34618385 - AluSc SINE Alu -17 292 3 426 300 55 67 chr17 54887680 54888023 -34616530 - L2 LINE L2 -8 3264 2926 739 171 229 0 chr17 54888099 54888304 -34616249 + Charlie5 DNA MER1_type 2372 2623 0 301 255 128 0 chr17 54888418 54888520 -34616033 - MIR SINE MIR -79 183 69 295 152 0 0 chr17 54888536 54888582 -34615971 - MER45C DNA AcHobo 0 953 908 496 216 60 0 chr17 54888589 54888705 -34615848 - MER45C DNA AcHobo -345 608 486 989 228 9 33 chr17 54888824 54889035 -34615518 - MER45C DNA AcHobo -747 206 1 551 244 154 9 chr17 54889425 54889646 -34614907 + MIR SINE MIR 10 262 0 2084 110 3 23 chr17 54890721 54891047 -34613506 + AluSx SINE Alu 1 312 0 226 335 22 66 chr17 54891091 54891126 -34613427 - MIR3 SINE MIR -23 185 150 776 240 18 0 chr17 54891126 54891297 -34613256 - MER5B DNA MER1_type -4 174 1 226 335 22 66 chr17 54891297 54891443 -34613110 - MIR3 SINE MIR -58 150 12 218 193 18 0 chr17 54891709 54891766 -34612787 + (CTCA)n Simple_repeat Simple_repeat 1 58 0 2111 95 7 46 chr17 54891819 54892124 -34612429 - AluSx SINE Alu -19 293 1 288 196 54 0 chr17 54892259 54892315 -34612238 - HAL1 LINE L1 -1113 1394 1336 594 125 0 0 chr17 54892417 54892505 -34612048 + AluJb SINE Alu 46 133 -179 1631 219 82 68 chr17 54892505 54892702 -34611851 - L1MC4 LINE L1 -929 7113 6920 2187 114 0 13 chr17 54892702 54893010 -34611543 - AluSx SINE Alu -6 306 3 1631 219 82 68 chr17 54893010 54893360 -34611193 - L1MC4 LINE L1 -1122 6920 6558 916 171 32 0 chr17 54893419 54893577 -34610976 - MLT1C LTR MaLR -50 417 255 421 196 151 0 chr17 54893577 54893695 -34610858 - L1MC4 LINE L1 -1273 6540 6410 * 635 204 149 69 chr17 54893690 54893762 -34610791 - L1MC4a LINE L1 -1558 6250 6185 1771 151 49 0 chr17 54893762 54894055 -34610498 - AluSx SINE Alu 0 309 4 635 204 149 69 chr17 54894055 54894256 -34610297 - L1MC4a LINE L1 -1623 6185 5954 2110 120 3 3 chr17 54894260 54894561 -34609992 + AluSg SINE Alu 1 301 -9 2290 76 10 0 chr17 54894562 54894852 -34609701 - AluY SINE Alu -18 293 1 2769 186 28 14 chr17 54894860 54895361 -34609192 + MER72 LTR ERV1 215 722 0 443 188 162 26 chr17 54895493 54895597 -34608956 + MER110 LTR ERV1 46 169 -322 553 55 0 121 chr17 54895597 54895648 -34608905 - MADE1 DNA Mariner 0 80 43 2355 88 0 3 chr17 54895648 54895944 -34608609 + AluSx SINE Alu 1 295 -17 553 55 0 121 chr17 54895944 54895983 -34608570 - MADE1 DNA Mariner -37 43 1 443 188 162 26 chr17 54895983 54895995 -34608558 + MER110 LTR ERV1 169 178 -313 1564 149 0 52 chr17 54896046 54896170 -34608383 + AluJb SINE Alu 6 110 -202 2327 80 3 0 chr17 54896170 54896458 -34608095 - AluY SINE Alu -22 289 1 1564 149 0 52 chr17 54896458 54896601 -34607952 + AluJb SINE Alu 110 259 -53 383 249 61 61 chr17 54896750 54896915 -34607638 + MIR SINE MIR 20 184 -78 2169 106 3 0 chr17 54896953 54897245 -34607308 - AluSq SINE Alu -17 296 4 632 159 159 0 chr17 54897715 54897828 -34606725 + AluJo/FLAM SINE Alu 2 132 -170 2142 82 7 0 chr17 54897828 54898097 -34606456 - AluY SINE Alu -17 294 24 2337 88 0 0 chr17 54898097 54898382 -34606171 + AluSp SINE Alu 14 298 -15 267 152 0 0 chr17 54898382 54898428 -34606125 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1467 209 3 20 chr17 54898504 54898810 -34605743 + AluJo SINE Alu 1 301 -11 1057 174 0 0 chr17 54899187 54899348 -34605205 - AluJo/FRAM SINE Alu -18 294 134 2118 130 0 0 chr17 54899348 54899640 -34604913 - AluSx SINE Alu -19 293 2 1272 146 40 18 chr17 54899667 54899893 -34604660 + AluJb SINE Alu 81 311 -1 666 231 6 47 chr17 54899894 54900063 -34604490 + MLT1A1 LTR MaLR 146 307 -58 2462 86 0 0 chr17 54900063 54900366 -34604187 + AluSc SINE Alu 1 303 -6 915 129 11 84 chr17 54900366 54900544 -34604009 + AluJb SINE Alu 134 298 -14 253 143 89 0 chr17 54900547 54900603 -34603950 + MLT1A1 LTR MaLR 314 374 0 406 220 61 61 chr17 54900615 54900747 -34603806 + L2 LINE L2 3181 3312 -1 2168 142 0 0 chr17 54900964 54901274 -34603279 - AluSx SINE Alu -2 310 1 1047 208 0 5 chr17 54901274 54901471 -34603082 - MER20 DNA MER1_type -19 200 5 1148 192 0 28 chr17 54902102 54902316 -34602237 - AluJb SINE Alu -23 289 82 225 225 62 62 chr17 54902387 54902467 -34602086 + L2 LINE L2 3230 3309 -4 266 330 90 0 chr17 54902475 54902575 -34601978 + L2 LINE L2 3192 3300 -13 1464 187 3 78 chr17 54902710 54903042 -34601511 + AluJb SINE Alu 1 307 -5 942 167 0 0 chr17 54903045 54903189 -34601364 + AluJb SINE Alu 156 299 -13 1366 95 20 20 chr17 54903211 54903411 -34601142 - AluSq SINE Alu -17 296 97 2066 125 14 10 chr17 54903412 54903709 -34600844 - AluSx SINE Alu -14 298 1 23 0 0 0 chr17 54903709 54903732 -34600821 + AT_rich Low_complexity Low_complexity 1 23 0 2242 81 0 7 chr17 54903732 54904017 -34600536 - AluSg SINE Alu -27 283 1 180 0 0 0 chr17 54904023 54904043 -34600510 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1310 137 32 41 chr17 54904587 54904755 -34599798 - L1M4 LINE L1 -682 5492 5324 496 0 0 0 chr17 54904755 54904810 -34599743 + (TTTTA)n Simple_repeat Simple_repeat 3 75 0 2053 128 4 0 chr17 54904810 54905091 -34599462 - AluSx SINE Alu -30 282 1 1310 137 32 41 chr17 54905091 54905241 -34599312 - L1M4 LINE L1 -848 5326 5175 2681 39 7 0 chr17 54905237 54905544 -34599009 - AluY SINE Alu -2 309 1 2434 96 0 6 chr17 54905708 54906021 -34598532 - AluSx SINE Alu 0 312 2 1566 161 111 7 chr17 54906572 54906852 -34597701 + AluSg1 SINE Alu 1 309 0 868 125 22 0 chr17 54906868 54907004 -34597549 + AluSg/x SINE Alu 174 312 0 194 302 0 0 chr17 54907026 54907069 -34597484 + L2 LINE L2 3251 3293 -20 2218 119 0 0 chr17 54907336 54907629 -34596924 - AluSg SINE Alu -17 293 1 296 309 18 9 chr17 54908510 54908620 -34595933 - LTR67 LTR ERVL -15 542 432 301 269 56 9 chr17 54909157 54909355 -34595198 - MIR SINE MIR -1 261 21 324 283 127 48 chr17 54909360 54909674 -34594879 - L2 LINE L2 -118 3195 2857 947 232 174 34 chr17 54909733 54910181 -34594372 + L2 LINE L2 2467 2977 -337 327 189 183 24 chr17 54910186 54910350 -34594203 - MLT1H LTR MaLR -250 299 110 433 271 19 0 chr17 54910516 54910623 -34593930 - L2 LINE L2 -5 3308 3200 762 117 0 0 chr17 54910625 54910745 -34593808 - AluSg/x SINE Alu 0 312 193 1134 82 0 0 chr17 54910745 54910891 -34593662 + AluSp/q SINE Alu 164 309 -4 1023 167 0 0 chr17 54910891 54911059 -34593494 - LTR26E LTR ERV1 -454 168 1 478 286 140 63 chr17 54911085 54911355 -34593198 - L2 LINE L2 -553 2761 2456 2242 101 0 14 chr17 54911355 54911652 -34592901 - AluSx SINE Alu -19 293 1 478 286 140 63 chr17 54911652 54911731 -34592822 - L2 LINE L2 -858 2456 2385 201 94 0 0 chr17 54911899 54911931 -34592622 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 207 359 22 56 chr17 54911933 54912164 -34592389 - L2 LINE L2 -15 3298 3076 2093 134 7 0 chr17 54912345 54912637 -34591916 + AluSx SINE Alu 2 295 -17 1034 154 6 12 chr17 54912637 54912799 -34591754 + AluJo/FRAM SINE Alu 134 294 -18 2261 128 0 0 chr17 54912802 54913108 -34591445 + AluSx SINE Alu 4 309 -3 268 303 52 72 chr17 54913539 54913790 -34590763 - L2 LINE L2 -792 2522 2277 446 263 76 50 chr17 54913828 54913899 -34590654 + MLT1J2 LTR MaLR 5 73 -377 1859 168 27 0 chr17 54913899 54914020 -34590533 + AluJb SINE Alu 1 117 -195 213 39 0 0 chr17 54914020 54914046 -34590507 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1859 168 27 0 chr17 54914046 54914222 -34590331 + AluJb SINE Alu 117 306 -6 446 263 76 50 chr17 54914222 54914348 -34590205 + MLT1J2 LTR MaLR 73 207 -243 828 224 47 0 chr17 54914348 54914518 -34590035 - MER58A DNA MER1_type -1 223 46 340 297 20 0 chr17 54914528 54914629 -34589924 + MLT1J1 LTR MaLR 197 299 -147 324 233 0 44 chr17 54914738 54914828 -34589725 + MLT1J2 LTR MaLR 365 450 0 1966 131 25 0 chr17 54915548 54915672 -34588881 + AluSx SINE Alu 1 120 -187 261 0 0 0 chr17 54915672 54915701 -34588852 + (CA)n Simple_repeat Simple_repeat 2 30 0 1966 131 25 0 chr17 54915701 54915876 -34588677 + AluSx SINE Alu 120 307 0 664 266 67 38 chr17 54916459 54916490 -34588063 + MLT1J1 LTR MaLR 3 32 -414 1954 158 89 8 chr17 54916490 54916709 -34587844 - MSTB LTR MaLR 0 426 226 1638 172 65 3 chr17 54916709 54916835 -34587718 + AluJb SINE Alu 1 118 -194 2302 129 0 0 chr17 54916835 54917145 -34587408 + AluSx SINE Alu 1 310 -2 1638 172 65 3 chr17 54917145 54917308 -34587245 + AluJb SINE Alu 118 308 -4 1954 158 89 8 chr17 54917308 54917481 -34587072 - MSTB LTR MaLR -200 226 2 664 266 67 38 chr17 54917481 54917716 -34586837 + MLT1J1 LTR MaLR 32 277 -169 1943 158 0 26 chr17 54917716 54917852 -34586701 + AluJb SINE Alu 1 139 -173 2147 101 0 17 chr17 54917852 54918194 -34586359 + AluSg SINE Alu 1 310 0 1943 158 0 26 chr17 54918194 54918367 -34586186 + AluJb SINE Alu 139 302 -10 437 211 42 0 chr17 54918393 54918488 -34586065 + MLT1J1 LTR MaLR 343 441 -5 2344 115 0 0 chr17 54918667 54918962 -34585591 + AluSx SINE Alu 1 295 -17 2549 70 0 0 chr17 54918964 54919265 -34585288 + AluSg SINE Alu 1 301 -9 1713 167 90 11 chr17 54919290 54919655 -34584898 - MSTD LTR MaLR 0 396 3 194 0 39 0 chr17 54919671 54919892 -34584661 + (TTTTG)n Simple_repeat Simple_repeat 1 229 0 1562 164 65 11 chr17 54919707 54919866 -34584687 - AluJo SINE Alu -22 290 108 194 0 39 0 chr17 54919866 54919892 -34584661 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 1562 164 65 11 chr17 54919892 54920007 -34584546 - AluJo SINE Alu -204 108 1 21 57 0 0 chr17 54920057 54920092 -34584461 + AT_rich Low_complexity Low_complexity 1 35 0 2244 18 7 0 chr17 54920730 54921002 -34583551 + L1PA5 LINE L1 5881 6154 0 257 280 127 17 chr17 54921416 54921534 -34583019 - MIR SINE MIR -115 147 17 1448 229 43 35 chr17 54922042 54922505 -34582048 - MLT1C LTR MaLR 0 467 1 276 317 113 34 chr17 54923289 54923582 -34580971 - L2 LINE L2 -348 2966 2651 188 357 111 4 chr17 54923647 54923882 -34580671 - L2 LINE L2 -1152 2162 1903 468 91 0 0 chr17 54924002 54924068 -34580485 + (GGA)n Simple_repeat Simple_repeat 2 67 0 214 296 10 20 chr17 54924323 54924421 -34580132 - MIR SINE MIR -84 124 28 765 272 68 65 chr17 54925068 54925480 -34579073 + MLT1J1 LTR MaLR 34 446 0 2145 123 7 0 chr17 54925982 54926284 -34578269 - AluJb SINE Alu -8 304 1 721 116 9 0 chr17 54926998 54927110 -34577443 - AluSx SINE Alu -6 304 192 1082 100 0 7 chr17 54927112 54927252 -34577301 - AluSx SINE Alu -173 140 2 436 183 115 10 chr17 54927254 54927358 -34577195 - MIR SINE MIR -37 225 111 800 109 7 36 chr17 54927440 54927577 -34576976 - FLAM_C SINE Alu 0 133 1 2231 96 3 20 chr17 54927860 54928153 -34576400 - AluSp SINE Alu -21 292 5 2122 118 13 30 chr17 54928158 54928462 -34576091 - AluSx SINE Alu -11 301 3 2078 169 27 27 chr17 54929570 54929649 -34574904 + L1MB5 LINE L1 5718 5796 -378 2492 99 0 0 chr17 54929649 54929961 -34574592 + AluSx SINE Alu 1 312 0 2078 169 27 27 chr17 54929961 54930330 -34574223 + L1MB5 LINE L1 5795 6166 -8 1114 159 101 44 chr17 54930449 54930676 -34573877 + AluJb SINE Alu 72 311 -1 228 135 0 0 chr17 54930681 54930718 -34573835 + (GGA)n Simple_repeat Simple_repeat 2 38 0 679 164 34 8 chr17 54930767 54930935 -34573618 + MLT1D LTR MaLR 284 505 0 2198 142 3 0 chr17 54930991 54931301 -34573252 + AluSx SINE Alu 1 311 -1 318 50 0 0 chr17 54931925 54931965 -34572588 + (GA)n Simple_repeat Simple_repeat 1 40 0 924 226 31 85 chr17 54932493 54932811 -34571742 + MLT1A1 LTR MaLR 4 304 -61 691 183 17 0 chr17 54932832 54932952 -34571601 - FLAM_C SINE Alu -19 124 3 438 171 0 0 chr17 54932954 54933030 -34571523 + MLT1A1 LTR MaLR 290 365 0 408 284 0 0 chr17 54933131 54933381 -34571172 + (TG)n Simple_repeat Simple_repeat 1 250 -324 2064 121 13 29 chr17 54933381 54933695 -34570858 - AluSp SINE Alu -4 309 1 408 284 0 0 chr17 54933695 54933705 -34570848 + (TG)n Simple_repeat Simple_repeat 249 574 0 228 300 0 50 chr17 54934731 54934831 -34569722 - MLT1L LTR MaLR -98 517 423 1835 142 9 49 chr17 54934860 54935184 -34569369 - AluJo SINE Alu -1 311 1 1140 179 66 0 chr17 54935287 54935483 -34569070 + AluJo SINE Alu 4 212 -100 852 162 10 91 chr17 54935483 54935617 -34568936 + L1MB5 LINE L1 5993 6107 -67 2187 122 0 0 chr17 54935617 54935913 -34568640 - AluSx SINE Alu -16 296 1 852 162 10 91 chr17 54935913 54935976 -34568577 + L1MB5 LINE L1 6107 6174 0 311 304 207 13 chr17 54936201 54936438 -34568115 - L2 LINE L2 -181 3091 2809 280 182 15 0 chr17 54936535 54936601 -34567952 + MER63 DNA MER1_type 870 936 -125 717 75 46 23 chr17 54936620 54936794 -34567759 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 837 22 44 44 chr17 54936817 54936997 -34567556 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1421 164 4 13 chr17 54937403 54937635 -34566918 + AluJo SINE Alu 2 231 -81 1116 114 8 106 chr17 54937635 54937736 -34566817 - L1MB4 LINE L1 -236 5944 5835 641 179 81 0 chr17 54937736 54937859 -34566694 + FLAM_C SINE Alu 1 133 0 1116 114 8 106 chr17 54937859 54938002 -34566551 - L1MB4 LINE L1 -345 5835 5724 1292 175 128 47 chr17 54938002 54938471 -34566082 + MER69 DNA AcHobo 2020 2526 0 466 305 99 8 chr17 54938486 54938748 -34565805 + L2 LINE L2 1929 2214 -1100 1038 153 114 6 chr17 54938748 54938924 -34565629 - AluJb SINE Alu -17 295 101 23 0 0 0 chr17 54938950 54938973 -34565580 + AT_rich Low_complexity Low_complexity 1 23 0 2033 128 28 0 chr17 54938978 54939266 -34565287 - AluSq SINE Alu -17 296 1 1805 177 22 37 chr17 54939583 54939990 -34564563 - L1MB5 LINE L1 0 6174 5774 334 308 126 68 chr17 54940897 54941160 -34563393 - L2 LINE L2 0 3272 2995 237 188 21 0 chr17 54941559 54941607 -34562946 + MER5B DNA MER1_type 1 49 -129 2414 98 0 9 chr17 54941613 54941928 -34562625 - AluSx SINE Alu 0 312 1 276 282 116 88 chr17 54942013 54942623 -34561930 - L2 LINE L2 -1208 2106 1480 4241 116 51 52 chr17 54943564 54944346 -34560207 + LTR1 LTR ERV1 1 781 -4 2469 74 7 0 chr17 54944351 54944648 -34559905 - AluSg SINE Alu -11 299 1 361 302 154 0 chr17 54944909 54945078 -34559475 + L2 LINE L2 2862 3056 -216 25 31 0 0 chr17 54945438 54945470 -34559083 + AT_rich Low_complexity Low_complexity 1 32 0 856 122 8 8 chr17 54945473 54945625 -34558928 - FLAM_C SINE Alu 0 152 1 918 221 89 148 chr17 54945629 54946203 -34558350 - MLT1H1 LTR MaLR -13 542 3 463 161 12 12 chr17 54946537 54946618 -34557935 - MLT1J2 LTR MaLR -303 147 67 299 241 152 0 chr17 54946658 54946737 -34557816 + MLT1L LTR MaLR 304 394 -221 280 234 156 47 chr17 54946711 54946839 -34557714 + MLT1J LTR MaLR 288 429 -82 * 272 257 87 87 chr17 54947041 54947089 -34557464 - L2 LINE L2 -339 2975 2928 2348 99 0 0 chr17 54947089 54947424 -34557129 + AluSc SINE Alu 1 335 0 272 257 87 87 chr17 54947424 54947580 -34556973 - L2 LINE L2 -385 2929 2770 1886 184 7 7 chr17 54947594 54947904 -34556649 + AluJb SINE Alu 3 312 0 233 230 0 27 chr17 54947912 54947986 -34556567 - L1MA10 LINE L1 -7 6327 6256 * 3437 202 42 60 chr17 54947965 54948477 -34556076 - L1ME1 LINE L1 -265 5901 5381 2210 127 16 0 chr17 54948477 54948784 -34555769 - AluSx SINE Alu 0 312 1 3437 202 42 60 chr17 54948784 54948984 -34555569 - L1ME1 LINE L1 -785 5381 5179 1457 174 0 0 chr17 54948984 54949208 -34555345 - AluJb SINE Alu -2 310 87 3437 202 42 60 chr17 54949208 54949305 -34555248 - L1ME1 LINE L1 -987 5179 5082 2177 128 0 0 chr17 54949305 54949601 -34554952 + AluSx SINE Alu 3 298 -14 3437 202 42 60 chr17 54949601 54950217 -34554336 - L1ME1 LINE L1 -1084 5082 4511 1783 119 4 0 chr17 54950217 54950452 -34554101 - AluSx SINE Alu -76 236 1 3437 202 42 60 chr17 54950452 54950673 -34553880 - L1ME1 LINE L1 -1655 4511 4287 573 216 7 61 chr17 54950981 54951083 -34553470 - MER112 DNA MER1_type -120 140 47 1840 147 39 3 chr17 54951083 54951369 -34553184 + AluJb SINE Alu 1 296 -16 573 216 7 61 chr17 54951369 54951414 -34553139 - MER112 DNA MER1_type -213 47 1 1255 194 154 80 chr17 54951865 54952313 -34552240 - MLT1C LTR MaLR 0 467 25 2264 129 0 0 chr17 54952815 54953126 -34551427 - AluSx SINE Alu -1 311 1 244 235 15 15 chr17 54953621 54953689 -34550864 - MIR SINE MIR -117 91 24 524 150 0 0 chr17 55154237 55154317 -34350236 - AluJ/FLAM SINE Alu -232 80 1 208 344 205 7 chr17 55155802 55155953 -34348600 + L2 LINE L2 2532 2712 -602 1156 175 14 24 chr17 55156292 55156503 -34348050 + MER3 DNA MER1_type 1 209 0 2071 136 0 22 chr17 55156788 55157105 -34347448 + AluSx SINE Alu 1 310 -2 1951 108 51 0 chr17 55157758 55158054 -34346499 + AluSx SINE Alu 1 311 -1 2116 247 51 8 chr17 55158419 55159026 -34345527 + L1ME1 LINE L1 5545 6333 -1 371 222 35 90 chr17 55160264 55160408 -34344145 + MIR SINE MIR 16 151 -57 2079 84 28 3 chr17 55160555 55160839 -34343714 - AluSg SINE Alu -19 291 1 2325 86 0 0 chr17 55161454 55161756 -34342797 + AluSx SINE Alu 5 306 -6 1762 90 27 132 chr17 55161756 55162089 -34342464 + AluSx SINE Alu 1 298 -14 204 329 37 0 chr17 55162092 55162174 -34342379 + L2 LINE L2 2290 2374 -940 289 330 0 0 chr17 55162567 55162655 -34341898 - MIR3 SINE MIR -54 154 67 578 346 132 11 chr17 55162705 55163084 -34341469 + L2 LINE L2 2844 3268 -4 509 305 95 11 chr17 55163130 55163320 -34341233 - MIR SINE MIR -32 230 25 2065 135 3 0 chr17 55163322 55163626 -34340927 - AluSx SINE Alu -7 305 1 440 299 123 5 chr17 55164465 55164652 -34339901 - MIR SINE MIR -29 233 25 501 299 118 5 chr17 55164814 55165035 -34339518 + MIR SINE MIR 8 253 -9 2112 113 3 0 chr17 55165601 55165893 -34338660 + AluSx SINE Alu 1 293 -19 1295 182 49 49 chr17 55166981 55167030 -34337523 - MER33 DNA MER1_type -2261 324 276 2358 84 0 23 chr17 55167030 55167340 -34337213 - AluSx SINE Alu -9 303 1 1295 182 49 49 chr17 55167340 55167614 -34336939 - MER33 DNA MER1_type -2308 277 1 357 236 40 14 chr17 55167754 55167881 -34336672 + MIR SINE MIR 5 144 -64 237 65 0 0 chr17 55168109 55168140 -34336413 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2034 96 43 10 chr17 55168144 55168446 -34336107 - AluSx SINE Alu 0 312 1 319 290 90 28 chr17 55168636 55168781 -34335772 + L1ME4a LINE L1 5967 6120 -1 2087 104 0 0 chr17 55168809 55169121 -34335432 - AluSg SINE Alu 0 312 1 285 98 0 0 chr17 55170008 55170049 -34334504 + (TCCCC)n Simple_repeat Simple_repeat 1 41 0 2104 118 3 0 chr17 55170049 55170338 -34334215 - AluSx SINE Alu -22 290 1 978 176 12 90 chr17 55170352 55170596 -34333957 - AluJo SINE Alu -1 311 87 212 274 0 0 chr17 55170765 55170816 -34333737 - MIR SINE MIR -114 148 98 221 268 67 144 chr17 55170989 55171183 -34333370 - MIR SINE MIR -51 211 33 255 308 22 22 chr17 55171647 55171738 -34332815 + MIR SINE MIR 156 246 -16 21 36 0 0 chr17 55171741 55171769 -34332784 + GC_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 55173399 55173420 -34331133 + (GGGTG)n Simple_repeat Simple_repeat 3 23 0 258 340 9 60 chr17 55173659 55173874 -34330679 + MIR3 SINE MIR 5 208 0 466 293 79 0 chr17 55174075 55174215 -34330338 - MIR SINE MIR -65 197 47 373 205 12 194 chr17 55174806 55174853 -34329700 - MIR SINE MIR -10 252 198 222 37 0 0 chr17 55174853 55174880 -34329673 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2226 86 0 0 chr17 55174884 55175164 -34329389 - AluSx SINE Alu -32 280 1 373 205 12 194 chr17 55175164 55175372 -34329181 - MIR SINE MIR -67 195 42 1919 142 19 13 chr17 55175926 55176236 -34328317 - AluSx SINE Alu 0 312 1 1664 180 23 3 chr17 55176401 55176701 -34327852 - AluJb SINE Alu -6 306 1 319 246 119 8 chr17 55177093 55177211 -34327342 + L1ME4a LINE L1 5984 6114 -7 391 227 60 82 chr17 55178505 55178666 -34325887 - MIR SINE MIR -65 143 40 1507 170 14 34 chr17 55178943 55179237 -34325316 - AluJo SINE Alu -18 294 7 187 206 0 0 chr17 55179629 55179663 -34324890 - L2 LINE L2 -12 3260 3227 815 166 7 0 chr17 55179968 55180107 -34324446 - MER5A DNA MER1_type -22 167 28 603 210 32 25 chr17 55180106 55180263 -34324290 - MER5B DNA MER1_type -20 158 1 * 562 296 0 13 chr17 55180831 55180983 -34323570 + MIR3 SINE MIR 31 180 -28 568 249 124 14 chr17 55181228 55181437 -34323116 + MIR SINE MIR 12 243 -19 2114 109 17 0 chr17 55181523 55181816 -34322737 - AluSx SINE Alu -14 298 1 348 125 188 0 chr17 55182058 55182122 -34322431 + MIR SINE MIR 77 152 -110 697 202 0 0 chr17 55182122 55182251 -34322302 + L2 LINE L2 3185 3313 0 258 221 103 0 chr17 55182259 55182327 -34322226 + MIR SINE MIR 178 252 -10 180 158 26 0 chr17 55182592 55182630 -34321923 - L2 LINE L2 0 3313 3275 336 333 92 50 chr17 55183213 55183495 -34321058 + L2 LINE L2 2946 3239 -33 1085 272 114 29 chr17 55183511 55184003 -34320550 - MLT1H1 LTR MaLR -12 543 10 742 104 0 0 chr17 55184104 55184210 -34320343 - AluSg/x SINE Alu -6 303 198 810 139 0 0 chr17 55184210 55184325 -34320228 - AluJo/FLAM SINE Alu -197 115 1 435 323 48 32 chr17 55184391 55184580 -34319973 + MIR3 SINE MIR 2 193 -15 488 318 72 36 chr17 55184933 55185035 -34319518 - L1ME4a LINE L1 -187 5934 5837 2385 80 3 0 chr17 55185035 55185346 -34319207 - AluSx SINE Alu 0 312 1 488 318 72 36 chr17 55185346 55185466 -34319087 - L1ME4a LINE L1 -284 5837 5704 325 185 0 0 chr17 55186388 55186442 -34318111 + AluJ/FRAM SINE Alu 214 267 -35 440 18 18 0 chr17 55186450 55186507 -34318046 + (GA)n Simple_repeat Simple_repeat 1 58 0 403 247 0 0 chr17 55187571 55187668 -34316885 + MER103 DNA DNA 24 120 -46 2241 105 0 0 chr17 55187841 55188137 -34316416 + AluSg SINE Alu 1 296 -14 1952 147 50 35 chr17 55188155 55188430 -34316123 - MER7A DNA MER2_type -2694 344 63 2033 125 0 3 chr17 55188430 55188738 -34315815 + AluSq SINE Alu 1 307 0 1952 147 50 35 chr17 55188738 55188802 -34315751 - MER7A DNA MER2_type -2975 63 1 310 282 239 0 chr17 55190257 55190399 -34314154 + L1ME4a LINE L1 5841 6016 -105 491 229 78 39 chr17 55190407 55190561 -34313992 - L2 LINE L2 -7 3306 3141 1863 174 0 0 chr17 55190561 55190859 -34313694 + AluJb SINE Alu 1 298 -14 491 229 78 39 chr17 55190859 55190909 -34313644 - L2 LINE L2 -172 3141 3094 302 200 0 17 chr17 55190956 55191016 -34313537 - L1MC2 LINE L1 -11 6333 6275 1911 56 0 0 chr17 55191018 55191252 -34313301 + L1PA3 LINE L1 5921 6154 -1 442 180 68 64 chr17 55191264 55191430 -34313123 - L1MC2 LINE L1 -5 7702 7538 1631 151 40 25 chr17 55191430 55191739 -34312814 - AluJo SINE Alu 0 313 1 442 180 68 64 chr17 55191739 55192281 -34312272 - L1MC2 LINE L1 -169 7538 7000 2210 101 0 7 chr17 55192281 55192578 -34311975 + AluSc SINE Alu 1 295 -14 442 180 68 64 chr17 55192578 55192948 -34311605 - L1MC2 LINE L1 -707 7000 6127 2281 73 0 48 chr17 55192949 55193265 -34311288 - AluSq SINE Alu -12 301 1 281 367 25 0 chr17 55193275 55193395 -34311158 - L2 LINE L2 -244 3069 2947 1414 249 210 5 chr17 55193494 55194093 -34310460 - L2 LINE L2 -353 2961 2240 369 232 24 32 chr17 55194588 55194713 -34309840 + GA-rich Low_complexity Low_complexity 4 127 0 783 259 148 14 chr17 55194770 55195375 -34309178 + L2 LINE L2 2454 3171 -142 294 29 0 0 chr17 55195375 55195410 -34309143 + (CA)n Simple_repeat Simple_repeat 2 36 0 783 259 148 14 chr17 55195410 55195421 -34309132 + L2 LINE L2 3171 3179 -134 1381 141 0 0 chr17 55195422 55195620 -34308933 - AluSg/x SINE Alu -28 284 87 361 328 74 0 chr17 55195636 55195758 -34308795 + L2 LINE L2 3183 3313 0 2267 103 0 3 chr17 55195902 55196204 -34308349 + AluSx SINE Alu 3 303 -9 2036 134 10 0 chr17 55196374 55196680 -34307873 - AluSq SINE Alu -4 309 1 852 182 28 11 chr17 55197407 55197573 -34306980 - AluJb SINE Alu -11 301 139 213 39 0 0 chr17 55197573 55197599 -34306954 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1856 124 15 0 chr17 55197599 55197866 -34306687 - AluSx SINE Alu -30 282 12 852 182 28 11 chr17 55197866 55197879 -34306674 - AluJb SINE Alu -172 140 118 1784 276 31 11 chr17 55197954 55198527 -34306026 + L1ME3A LINE L1 5586 6170 0 221 340 48 48 chr17 55198535 55198723 -34305830 - L3b LINE CR1 -227 1356 1169 1846 140 27 3 chr17 55199808 55200101 -34304452 - AluJo SINE Alu -6 306 7 2239 102 0 0 chr17 55200119 55200413 -34304140 - AluSg SINE Alu -16 294 1 237 290 46 99 chr17 55200413 55200544 -34304009 - L2 LINE L2 -10 3303 3180 265 237 0 0 chr17 55200970 55201029 -34303524 + MIR3 SINE MIR 104 162 -46 324 223 179 18 chr17 55201864 55201976 -34302577 - MIR SINE MIR -81 181 52 319 361 59 35 chr17 55202443 55202645 -34301908 - MIR SINE MIR 0 262 56 327 78 0 0 chr17 55203137 55203188 -34301365 + (TG)n Simple_repeat Simple_repeat 1 51 0 1955 146 0 0 chr17 55203266 55203553 -34301000 + AluSx SINE Alu 6 292 -20 294 258 142 17 chr17 55205259 55205379 -34299174 + L2 LINE L2 2341 2475 -839 588 234 30 31 chr17 55205494 55205655 -34298898 + MIR SINE MIR 33 196 -48 2019 96 53 0 chr17 55205655 55205924 -34298629 + AluSx SINE Alu 1 303 -9 208 0 0 0 chr17 55205924 55205947 -34298606 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2019 96 53 0 chr17 55205947 55205958 -34298595 + AluSx SINE Alu 303 312 0 588 234 30 31 chr17 55205958 55206005 -34298548 + MIR SINE MIR 196 242 -2 2516 48 0 3 chr17 55206006 55206301 -34298252 + AluY SINE Alu 1 294 -17 336 200 0 0 chr17 55206321 55206376 -34298177 - MIR3 SINE MIR -39 169 115 2456 94 0 0 chr17 55207037 55207346 -34297207 + AluSx SINE Alu 1 309 -3 865 188 177 0 chr17 55207428 55207614 -34296939 + MER20 DNA MER1_type 1 219 0 1981 151 0 13 chr17 55207913 55208225 -34296328 + AluJb SINE Alu 3 310 -2 322 273 122 0 chr17 55210143 55210282 -34294271 - MIR3 SINE MIR -14 194 39 2375 95 0 9 chr17 55210705 55211020 -34293533 - AluSx SINE Alu 0 312 1 180 267 167 0 chr17 55211205 55211265 -34293288 + MIR3 SINE MIR 7 76 -132 183 279 107 50 chr17 55211977 55212117 -34292436 - MIR3 SINE MIR -11 197 50 873 155 16 0 chr17 55212123 55212252 -34292301 - FLAM_C SINE Alu -2 131 1 1862 144 3 35 chr17 55212256 55212568 -34291985 - AluJo SINE Alu -10 302 1 207 329 44 0 chr17 55214190 55214259 -34290294 - MIR SINE MIR -104 104 32 329 149 15 45 chr17 55214633 55214700 -34289853 - AluJ/FLAM SINE Alu -237 65 1 1418 146 0 18 chr17 55214986 55215212 -34289341 - AluJb SINE Alu -90 222 1 216 308 56 37 chr17 55215443 55215550 -34289003 - MIR3 SINE MIR -4 204 96 474 179 0 0 chr17 55217579 55217657 -34286896 - MER116 DNA Mariner 0 80 3 2306 102 0 0 chr17 55218823 55219117 -34285436 + AluSx SINE Alu 6 299 -13 1988 137 0 26 chr17 55219260 55219573 -34284980 - AluJb SINE Alu -7 305 1 2264 101 0 7 chr17 55222961 55223257 -34281296 + AluSx SINE Alu 1 294 -18 544 274 133 52 chr17 55223314 55223436 -34281117 + L2 LINE L2 2018 2129 -1185 1541 119 0 0 chr17 55223436 55223646 -34280907 - AluSg/x SINE Alu -3 309 100 544 274 133 52 chr17 55223646 55223906 -34280647 + L2 LINE L2 2129 2431 -883 344 300 114 79 chr17 55224204 55224547 -34280006 + L2 LINE L2 2918 3272 0 288 203 87 14 chr17 55224568 55224637 -34279916 - MIR SINE MIR -102 160 87 2078 139 17 0 chr17 55224748 55225049 -34279504 + AluSx SINE Alu 1 306 -6 1404 196 79 0 chr17 55225557 55225857 -34278696 + AluJo SINE Alu 1 321 0 2307 90 20 3 chr17 55225972 55226272 -34278281 - AluSc SINE Alu -4 305 1 2227 114 3 0 chr17 55226280 55226579 -34277974 - AluSq SINE Alu -13 300 1 742 161 42 8 chr17 55226588 55226706 -34277847 - FLAM_C SINE Alu -11 122 1 345 275 154 42 chr17 55227428 55227863 -34276690 + L1ME3A LINE L1 5625 5907 -271 2522 155 31 31 chr17 55228098 55228512 -34276041 + MLT2D LTR ERVL 1 414 0 264 222 183 53 chr17 55228736 55228903 -34275650 - MIR3 SINE MIR -75 187 8 24 32 0 0 chr17 55229719 55229750 -34274803 + AT_rich Low_complexity Low_complexity 1 31 0 1561 166 72 4 chr17 55232133 55232410 -34272143 + AluJo SINE Alu 1 296 -16 387 360 98 40 chr17 55232985 55233313 -34271240 - L2 LINE L2 -47 3225 2879 365 256 283 16 chr17 55233389 55233580 -34270973 - L2 LINE L2 -621 2693 2452 1812 159 16 16 chr17 55233602 55233911 -34270642 + AluJb SINE Alu 1 309 -3 1065 145 0 19 chr17 55234028 55234187 -34270366 + FAM SINE Alu 2 157 -18 2293 109 3 3 chr17 55234705 55235017 -34269536 - AluSq SINE Alu -1 312 1 896 107 38 8 chr17 55235097 55235228 -34269325 + AluJb SINE Alu 1 135 -177 1730 178 3 16 chr17 55235228 55235532 -34269021 + AluJo SINE Alu 1 300 -12 551 195 0 0 chr17 55235589 55235676 -34268877 + Tigger4(Zombi) DNA MER2_type 1 87 -2644 373 129 0 16 chr17 55235673 55235735 -34268818 + Tigger4(Zombi) DNA MER2_type 2295 2355 -376 * 1062 108 0 36 chr17 55235733 55235899 -34268654 + Tigger4(Zombi) DNA MER2_type 2572 2731 0 750 140 12 18 chr17 55235905 55236076 -34268477 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 2293 100 3 10 chr17 55236263 55236574 -34267979 + AluSg SINE Alu 1 309 -1 269 288 0 14 chr17 55237354 55237427 -34267126 - L3 LINE CR1 -18 1559 1488 535 271 8 0 chr17 55238219 55238348 -34266205 + MIR SINE MIR 59 188 -74 2435 70 3 3 chr17 55238917 55239219 -34265334 + AluY SINE Alu 1 302 -9 753 241 62 20 chr17 55240644 55240839 -34263714 + MER58 DNA MER1_type 2 204 -2216 857 188 135 0 chr17 55240894 55241064 -34263489 - MER46A DNA MER2_type 0 236 44 964 196 0 22 chr17 55241844 55242028 -34262525 - AluJb SINE Alu -4 308 129 2161 138 0 0 chr17 55242446 55242744 -34261809 + AluSx SINE Alu 1 298 -14 976 62 86 0 chr17 55242755 55242883 -34261670 + MER85 DNA T2_type 1 139 0 1736 171 3 7 chr17 55243059 55243357 -34261196 - AluJo SINE Alu -6 306 10 2091 176 30 0 chr17 55243617 55243953 -34260600 + MER7A DNA MER2_type 2 345 -1 2461 64 0 3 chr17 55244544 55244840 -34259713 - AluY SINE Alu -16 295 1 315 225 133 79 chr17 55245364 55245420 -34259133 + Charlie7 DNA MER1_type 429 481 -2131 1989 139 20 0 chr17 55245420 55245714 -34258839 - AluSx SINE Alu -12 300 1 315 225 133 79 chr17 55245714 55245973 -34258580 + Charlie7 DNA MER1_type 481 761 -1851 430 131 50 61 chr17 55246006 55246105 -34258448 - L1MB4 LINE L1 -2 6178 6081 2242 115 0 0 chr17 55246140 55246436 -34258117 - AluSq SINE Alu -17 296 1 739 174 0 23 chr17 55246436 55246568 -34257985 - AluJ SINE Alu -1 311 183 * 844 193 7 0 chr17 55246559 55246699 -34257854 - AluJ SINE Alu -170 142 2 892 169 0 0 chr17 55246734 55246876 -34257677 - L1MB4 LINE L1 -216 5964 5823 255 56 0 0 chr17 55246886 55246922 -34257631 + L1MB1 LINE L1 6097 6132 -36 1725 134 7 39 chr17 55246928 55247211 -34257342 + AluJb SINE Alu 28 301 -11 666 161 0 0 chr17 55247234 55247327 -34257226 + AluSx SINE Alu 2 94 -219 2148 127 0 3 chr17 55247328 55247627 -34256926 + AluSg SINE Alu 2 299 -11 1763 90 0 5 chr17 55247627 55247849 -34256704 + AluSx SINE Alu 80 301 -9 394 116 0 7 chr17 55247889 55247956 -34256597 - L1MB5 LINE L1 -343 5831 5768 364 255 136 68 chr17 55248001 55248236 -34256317 + L2 LINE L2 3034 3284 -29 2753 76 14 14 chr17 55248584 55248939 -34255614 + THE1A LTR MaLR 1 355 0 1727 172 11 4 chr17 55248986 55249265 -34255288 + AluJb SINE Alu 6 286 -26 459 194 47 47 chr17 55249299 55249428 -34255125 + L1ME2 LINE L1 6034 6162 -2 1783 150 10 14 chr17 55250172 55250465 -34254088 - AluJo SINE Alu -8 304 13 2092 106 14 0 chr17 55251370 55251675 -34252878 + AluSq SINE Alu 1 309 0 239 211 19 0 chr17 55251861 55251913 -34252640 - L2 LINE L2 -5 3267 3215 361 267 96 30 chr17 55252189 55252324 -34252229 - MIR SINE MIR -85 177 34 2418 91 10 0 chr17 55252535 55252842 -34251711 - AluSg SINE Alu 0 310 1 23 0 0 0 chr17 55254001 55254024 -34250529 + AT_rich Low_complexity Low_complexity 1 23 0 1976 108 14 4 chr17 55254968 55255245 -34249308 + AluSx SINE Alu 5 284 -28 399 41 0 0 chr17 55255256 55255305 -34249248 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 1711 190 0 3 chr17 55256540 55256829 -34247724 - AluJo SINE Alu -24 288 1 23 54 0 0 chr17 55256965 55257002 -34247551 + AT_rich Low_complexity Low_complexity 1 37 0 1455 189 91 0 chr17 55257013 55257299 -34247254 + AluJb SINE Alu 1 312 0 291 182 0 91 chr17 55257301 55257321 -34247232 + AluJb SINE Alu 118 138 -164 594 172 107 25 chr17 55257321 55257443 -34247110 + FLAM_C SINE Alu 1 132 -1 291 182 0 91 chr17 55257443 55257499 -34247054 + AluJb SINE Alu 138 187 -115 1422 128 8 49 chr17 55257520 55257763 -34246790 + AluJo SINE Alu 57 289 -23 598 319 45 8 chr17 55258332 55258619 -34245934 + L1ME3 LINE L1 5617 5914 -276 1611 177 32 3 chr17 55258968 55259251 -34245302 + AluSx SINE Alu 1 291 -21 21 0 0 0 chr17 55259372 55259393 -34245160 + AT_rich Low_complexity Low_complexity 1 21 0 2245 120 0 0 chr17 55260081 55260390 -34244163 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr17 55261623 55261652 -34242901 + (TG)n Simple_repeat Simple_repeat 1 29 0 25 31 0 0 chr17 55261992 55262024 -34242529 + AT_rich Low_complexity Low_complexity 1 32 0 229 48 71 0 chr17 55262871 55262913 -34241640 + A-rich Low_complexity Low_complexity 2 46 0 343 341 37 89 chr17 55264854 55265068 -34239485 - L2 LINE L2 -52 3220 3018 252 86 0 0 chr17 55265095 55265130 -34239423 + (TA)n Simple_repeat Simple_repeat 1 35 0 402 318 106 52 chr17 55265198 55265623 -34238930 - L2 LINE L2 -886 2428 1981 690 202 0 8 chr17 55265696 55265820 -34238733 + FLAM_A SINE Alu 5 127 -6 2369 94 0 0 chr17 55265898 55266195 -34238358 - AluSx SINE Alu -15 297 1 25 31 0 0 chr17 55266742 55266774 -34237779 + AT_rich Low_complexity Low_complexity 1 32 0 2139 132 0 0 chr17 55266802 55267097 -34237456 + AluSg SINE Alu 1 295 -15 351 0 0 0 chr17 55267235 55267274 -34237279 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1606 150 64 0 chr17 55267277 55267543 -34237010 - AluJb SINE Alu -29 283 1 436 248 20 74 chr17 55267838 55267889 -34236664 - MIR3 SINE MIR -3 205 153 1018 150 80 28 chr17 55267889 55268102 -34236451 - MER58A DNA MER1_type 0 224 1 436 248 20 74 chr17 55268102 55268199 -34236354 - MIR3 SINE MIR -55 153 65 384 77 0 0 chr17 55268393 55268445 -34236108 + (CA)n Simple_repeat Simple_repeat 1 52 0 372 312 84 55 chr17 55269154 55269462 -34235091 + L1MC4a LINE L1 5647 5963 -1845 715 249 59 67 chr17 55269499 55269872 -34234681 + HAL1 LINE L1 2 371 -2136 2007 249 147 52 chr17 55269992 55271147 -34233406 + HAL1 LINE L1 823 1867 -640 2163 102 20 0 chr17 55271147 55271441 -34233112 + AluSg SINE Alu 9 308 -2 2007 249 147 52 chr17 55271441 55271624 -34232929 + HAL1 LINE L1 1867 2031 -476 1069 193 0 10 chr17 55271624 55271826 -34232727 - MER105 DNA DNA -1 203 4 2007 249 147 52 chr17 55271826 55271899 -34232654 + HAL1 LINE L1 2031 2369 -138 389 245 11 11 chr17 55271914 55272008 -34232545 + HAL1 LINE L1 1675 1768 -739 300 27 0 0 chr17 55272032 55272069 -34232484 + (GA)n Simple_repeat Simple_repeat 1 37 0 502 250 59 15 chr17 55272073 55272209 -34232344 + MIR SINE MIR 48 189 -73 427 266 291 5 chr17 55272231 55272434 -34232119 - MIR SINE MIR 0 262 2 1582 116 54 27 chr17 55272602 55272780 -34231773 + AluSx SINE Alu 29 218 -94 198 71 0 0 chr17 55272780 55272808 -34231745 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 1582 116 54 27 chr17 55272808 55272887 -34231666 + AluSx SINE Alu 218 293 -19 1266 143 58 130 chr17 55273448 55273788 -34230765 + MLT1A1 LTR MaLR 1 364 -1 2134 99 17 14 chr17 55273788 55274080 -34230473 + AluSx SINE Alu 1 293 -19 2289 67 3 0 chr17 55274083 55274397 -34230156 + AluSp SINE Alu 1 315 0 1266 143 58 130 chr17 55274397 55274444 -34230109 + MLT1A1 LTR MaLR 316 365 0 1936 134 72 0 chr17 55275230 55275550 -34229003 + MER2 DNA MER2_type 1 343 -1 32 0 0 0 chr17 55275882 55275914 -34228639 + AT_rich Low_complexity Low_complexity 1 32 0 2323 85 0 0 chr17 55276362 55276655 -34227898 + AluSg SINE Alu 8 300 -10 257 109 263 0 chr17 55276683 55276738 -34227815 + FRAM/FAM SINE Alu 14 72 -94 376 319 25 8 chr17 55276786 55276905 -34227648 + MER5A DNA MER1_type 68 188 -1 294 29 0 0 chr17 55277144 55277179 -34227374 + (TAA)n Simple_repeat Simple_repeat 1 35 0 2155 79 32 4 chr17 55277179 55277488 -34227065 + AluSp SINE Alu 1 317 0 465 315 88 0 chr17 55277514 55277695 -34226858 + MIR SINE MIR 66 262 0 212 200 0 55 chr17 55277727 55277837 -34226716 + (TTA)n Simple_repeat Simple_repeat 3 106 0 1777 173 0 7 chr17 55278178 55278478 -34226075 - AluSx SINE Alu -14 298 1 1473 105 148 12 chr17 55278526 55278783 -34225770 + AluSg1 SINE Alu 1 292 -17 206 177 48 16 chr17 55278837 55278899 -34225654 + (TTATA)n Simple_repeat Simple_repeat 5 68 0 2038 119 45 0 chr17 55278956 55279242 -34225311 + AluSp SINE Alu 1 299 -14 401 174 186 12 chr17 55279262 55279348 -34225205 + FLAM_A SINE Alu 20 120 -13 445 69 42 0 chr17 55279349 55279421 -34225132 + L1MB1 LINE L1 6093 6167 -1 933 92 0 0 chr17 55279427 55279547 -34225006 + AluSg/x SINE Alu 177 296 -14 2216 123 7 0 chr17 55279549 55279859 -34224694 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 55279974 55279996 -34224557 + AT_rich Low_complexity Low_complexity 1 22 0 1460 172 0 8 chr17 55280120 55280364 -34224189 + AluSx SINE Alu 1 242 -70 246 62 0 0 chr17 55280826 55280858 -34223695 + (A)n Simple_repeat Simple_repeat 1 32 0 2496 70 3 3 chr17 55281176 55281488 -34223065 - AluSp SINE Alu -1 312 1 1968 159 0 10 chr17 55281662 55281963 -34222590 + AluSx SINE Alu 1 298 -14 6716 131 54 21 chr17 55282029 55283217 -34221336 + Tigger3b DNA MER2_type 4 1230 -1 3396 158 110 15 chr17 55283710 55284440 -34220113 + L1MB2 LINE L1 5362 6139 -32 244 158 0 171 chr17 55285380 55285426 -34219127 + L2 LINE L2 3200 3228 -44 1954 130 17 20 chr17 55285426 55285726 -34218827 - AluSg SINE Alu -11 299 1 244 158 0 171 chr17 55285726 55285761 -34218792 + L2 LINE L2 3228 3267 -5 1847 151 3 10 chr17 55286674 55286973 -34217580 - AluJb SINE Alu -13 299 3 2208 99 7 0 chr17 55287166 55287470 -34217083 + AluSp SINE Alu 1 306 -7 584 140 185 19 chr17 55287542 55287699 -34216854 - L1MA9 LINE L1 0 6312 6130 682 229 0 0 chr17 55288041 55288172 -34216381 - FAM SINE Alu -21 164 34 210 283 67 0 chr17 55288245 55288305 -34216248 + L2 LINE L2 3245 3308 -5 2130 166 198 153 chr17 55288834 55289540 -34215013 + L1MC4a LINE L1 6251 6095 -238 743 192 0 0 chr17 55289540 55289665 -34214888 + FLAM_C SINE Alu 1 125 -18 2130 166 198 153 chr17 55289665 55289916 -34214637 + L1MC4a LINE L1 6094 6332 -1 269 219 0 41 chr17 55290465 55290538 -34214015 + L1MC/D LINE L1 5691 5760 -2048 211 293 168 34 chr17 55290561 55291008 -34213545 + L2 LINE L2 1563 2069 -1245 1071 171 22 6 chr17 55291629 55291810 -34212743 - AluJ SINE Alu -22 290 107 21 36 0 0 chr17 55291826 55291854 -34212699 + AT_rich Low_complexity Low_complexity 1 28 0 2076 112 38 0 chr17 55291854 55292141 -34212412 + AluSx SINE Alu 1 298 -14 196 143 36 0 chr17 55292142 55292198 -34212355 + (TA)n Simple_repeat Simple_repeat 1 58 0 324 0 0 0 chr17 55292198 55292234 -34212319 + (TG)n Simple_repeat Simple_repeat 2 37 0 715 172 9 0 chr17 55292261 55292377 -34212176 - AluJ SINE Alu -185 117 1 983 273 142 26 chr17 55292690 55293112 -34211441 - L2 LINE L2 -1018 2296 1826 315 316 150 19 chr17 55293118 55293384 -34211169 + L2 LINE L2 2901 3201 -112 2198 99 3 42 chr17 55294465 55294777 -34209776 + AluSx SINE Alu 1 300 -12 529 215 75 145 chr17 55295056 55295284 -34209269 - L2 LINE L2 -2 3311 3100 2031 121 4 0 chr17 55297429 55297702 -34206851 - AluSx SINE Alu -38 274 1 451 317 153 10 chr17 55299105 55299307 -34205246 - MIR SINE MIR -11 251 21 428 251 166 6 chr17 55299554 55299717 -34204836 - MIR SINE MIR -65 197 9 31 26 0 0 chr17 55300098 55300136 -34204417 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr17 55303120 55303148 -34201405 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr17 55303372 55303414 -34201139 + AT_rich Low_complexity Low_complexity 1 42 0 1520 156 67 11 chr17 55303617 55303887 -34200666 + AluJo SINE Alu 9 293 -19 1430 174 0 13 chr17 55303906 55304142 -34200411 + AluJo SINE Alu 1 233 -79 2031 90 34 4 chr17 55304142 55304410 -34200143 - AluSx SINE Alu -36 276 1 343 182 0 61 chr17 55305443 55305575 -34198978 + GA-rich Low_complexity Low_complexity 4 127 0 2168 106 7 0 chr17 55305628 55305920 -34198633 - AluSx SINE Alu -18 294 1 2071 128 0 0 chr17 55305952 55306241 -34198312 + AluSx SINE Alu 3 291 -21 249 308 138 46 chr17 55306241 55306362 -34198191 + MIR3 SINE MIR 24 159 -49 2024 119 39 0 chr17 55307289 55307575 -34196978 + AluSx SINE Alu 1 297 -15 30 69 0 0 chr17 55307580 55307638 -34196915 + AT_rich Low_complexity Low_complexity 1 58 0 49 18 0 0 chr17 55307703 55307759 -34196794 + AT_rich Low_complexity Low_complexity 1 56 0 1702 143 3 64 chr17 55307759 55307917 -34196636 + AluJb SINE Alu 5 136 -176 2206 105 0 0 chr17 55307917 55308212 -34196341 + AluSg SINE Alu 1 295 -15 1702 143 3 64 chr17 55308212 55308367 -34196186 + AluJb SINE Alu 136 299 -13 419 63 16 0 chr17 55308368 55308431 -34196122 + (TA)n Simple_repeat Simple_repeat 1 64 0 1980 124 23 23 chr17 55308629 55308935 -34195618 - AluJb SINE Alu -6 306 1 2411 73 0 10 chr17 55308945 55309248 -34195305 - AluY SINE Alu -11 300 1 25 31 0 0 chr17 55309539 55309571 -34194982 + AT_rich Low_complexity Low_complexity 1 32 0 1949 130 0 18 chr17 55309580 55309865 -34194688 + AluSx SINE Alu 3 282 -30 22 35 0 0 chr17 55311516 55311545 -34193008 + AT_rich Low_complexity Low_complexity 1 29 0 32 43 0 0 chr17 55312405 55312451 -34192102 + AT_rich Low_complexity Low_complexity 1 46 0 1139 239 24 0 chr17 55312774 55313029 -34191524 - MIR SINE MIR 0 262 2 1493 222 145 32 chr17 55313208 55313740 -34190813 + L1ME3A LINE L1 5411 6002 -168 1985 78 7 68 chr17 55313995 55314318 -34190235 + AluSg SINE Alu 11 310 0 564 262 140 63 chr17 55314318 55314604 -34189949 + L2 LINE L2 2539 2846 -468 1754 150 76 87 chr17 55314628 55314735 -34189818 + MLT1B LTR MaLR 1 108 -282 2161 118 7 10 chr17 55314735 55315040 -34189513 + AluSx SINE Alu 1 304 -8 1754 150 76 87 chr17 55315040 55315325 -34189228 + MLT1B LTR MaLR 108 389 -1 2426 82 0 3 chr17 55315351 55315654 -34188899 - AluSc SINE Alu -3 306 5 2217 108 10 3 chr17 55315843 55316150 -34188403 + AluSq SINE Alu 1 309 -4 22 70 0 0 chr17 55316500 55316543 -34188010 + AT_rich Low_complexity Low_complexity 1 43 0 3297 141 18 28 chr17 55316619 55317103 -34187450 - L1MC1 LINE L1 -1 6332 5853 2163 120 3 0 chr17 55317103 55317402 -34187151 - AluSx SINE Alu -12 300 1 3297 141 18 28 chr17 55317402 55317485 -34187068 - L1MC1 LINE L1 -480 5853 5771 2307 96 0 10 chr17 55317639 55317941 -34186612 + AluSx SINE Alu 1 299 -13 2260 108 7 0 chr17 55318114 55318411 -34186142 + AluSx SINE Alu 1 299 -13 207 0 0 0 chr17 55318411 55318434 -34186119 + (TAAG)n Simple_repeat Simple_repeat 1 23 0 27 49 0 0 chr17 55318434 55318475 -34186078 + AT_rich Low_complexity Low_complexity 1 41 0 1875 161 46 22 chr17 55319000 55319352 -34185201 + L1MB7 LINE L1 5780 6143 -41 2300 100 0 3 chr17 55319352 55319642 -34184911 + AluSq SINE Alu 1 289 -24 1875 161 46 22 chr17 55319642 55319655 -34184898 + L1MB7 LINE L1 6143 6154 -30 871 126 0 35 chr17 55319702 55319845 -34184708 - FLAM_C SINE Alu -5 138 1 770 234 54 15 chr17 55320151 55320356 -34184197 + MLT1J2 LTR MaLR 1 213 -237 235 267 67 22 chr17 55320450 55320540 -34184013 + MLT1J1 LTR MaLR 346 439 -7 1863 163 0 17 chr17 55320622 55320923 -34183630 - AluJo SINE Alu -16 296 1 1059 106 0 0 chr17 55320953 55321094 -34183459 + AluSg/x SINE Alu 169 309 -3 851 52 0 0 chr17 55321099 55321196 -34183357 + AluSc SINE Alu 13 109 -200 1653 92 5 5 chr17 55321196 55321414 -34183139 + AluSc SINE Alu 73 290 -19 200 265 0 20 chr17 55321875 55321924 -34182629 + GA-rich Low_complexity Low_complexity 4 51 0 368 332 97 39 chr17 55322939 55323322 -34181231 - L3b LINE CR1 -27 1556 1152 22 0 0 0 chr17 55323721 55323743 -34180810 + AT_rich Low_complexity Low_complexity 1 22 0 37 52 0 0 chr17 55324094 55324152 -34180401 + AT_rich Low_complexity Low_complexity 1 58 0 282 205 48 48 chr17 55324492 55324575 -34179978 + FLAM_A SINE Alu 3 85 -48 262 217 237 0 chr17 55325415 55325567 -34178986 + L1ME4a LINE L1 5802 5989 -132 2280 104 0 0 chr17 55326586 55326884 -34177669 - AluSx SINE Alu -14 298 1 2247 110 0 3 chr17 55326913 55327212 -34177341 + AluSx SINE Alu 1 298 -14 1475 197 21 24 chr17 55327422 55327556 -34176997 + AluJb SINE Alu 1 134 -178 2275 61 3 14 chr17 55327556 55327850 -34176703 + AluY SINE Alu 1 291 -20 1475 197 21 24 chr17 55327850 55328005 -34176548 + AluJb SINE Alu 134 289 -23 22 0 0 0 chr17 55328017 55328039 -34176514 + AT_rich Low_complexity Low_complexity 1 22 0 2085 91 24 28 chr17 55328333 55328467 -34176086 + AluSg SINE Alu 1 134 -176 2490 42 0 0 chr17 55328467 55328787 -34175766 + AluY SINE Alu 1 320 0 2085 91 24 28 chr17 55328787 55328936 -34175617 + AluSg SINE Alu 134 286 -24 2364 107 3 0 chr17 55329427 55329737 -34174816 + AluSx SINE Alu 1 311 -1 1877 174 3 0 chr17 55330055 55330353 -34174200 + AluJo SINE Alu 1 299 -13 2031 121 0 0 chr17 55330356 55330637 -34173916 + AluY SINE Alu 31 311 0 1660 166 21 3 chr17 55330652 55330935 -34173618 + AluJb SINE Alu 1 288 -24 2361 108 0 0 chr17 55330966 55331273 -34173280 + AluSx SINE Alu 1 307 -5 506 174 272 0 chr17 55331392 55331484 -34173069 + FLAM_C SINE Alu 2 118 -25 831 106 0 0 chr17 55331498 55331649 -34172904 + (CTAG)n Simple_repeat Simple_repeat 1 151 0 2096 98 18 0 chr17 55331649 55331934 -34172619 - AluSp SINE Alu -23 290 1 1990 150 0 10 chr17 55332166 55332466 -34172087 - AluJb SINE Alu -15 297 1 830 183 0 15 chr17 55332469 55332606 -34171947 - FLAM_C SINE Alu -7 136 2 22 35 0 0 chr17 55333223 55333252 -34171301 + AT_rich Low_complexity Low_complexity 1 29 0 2026 137 0 33 chr17 55333744 55334051 -34170502 - AluSx SINE Alu -15 297 1 2811 233 130 44 chr17 55334672 55335113 -34169440 + L2 LINE L2 1860 2262 -1051 2289 106 0 19 chr17 55335113 55335425 -34169128 + AluSg SINE Alu 1 306 -4 2811 233 130 44 chr17 55335425 55335765 -34168788 + L2 LINE L2 2262 2571 -742 1521 117 0 0 chr17 55335765 55335971 -34168582 + AluSg/x SINE Alu 83 288 -22 2354 93 7 0 chr17 55335974 55336275 -34168278 + AluSp SINE Alu 1 303 -10 2811 233 130 44 chr17 55336275 55336607 -34167946 + L2 LINE L2 2572 2874 -439 2333 93 13 16 chr17 55336607 55336917 -34167636 + AluSx SINE Alu 1 309 -3 2811 233 130 44 chr17 55336917 55337148 -34167405 + L2 LINE L2 2874 3313 0 264 161 107 36 chr17 55337397 55337453 -34167100 + MLT1K LTR MaLR 98 157 -431 492 227 109 68 chr17 55337515 55337735 -34166818 + MLT1K LTR MaLR 324 552 -36 2172 125 0 6 chr17 55337737 55338049 -34166504 - AluSx SINE Alu -2 310 1 360 0 0 0 chr17 55338056 55338096 -34166457 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 600 187 89 8 chr17 55338103 55338226 -34166327 - FRAM SINE Alu -37 139 7 307 160 0 0 chr17 55338592 55338642 -34165911 - L2 LINE L2 0 3272 3223 1956 109 3 67 chr17 55338908 55339221 -34165332 - AluSx SINE Alu -19 293 1 1967 147 10 0 chr17 55339353 55339660 -34164893 - AluSx SINE Alu -2 310 1 2104 116 6 47 chr17 55340472 55340792 -34163761 - AluSx SINE Alu -5 307 1 1707 167 0 40 chr17 55340871 55341171 -34163382 + AluSx SINE Alu 1 288 -24 1984 128 31 0 chr17 55341176 55341464 -34163089 + AluSg SINE Alu 14 310 0 21 0 0 0 chr17 55342227 55342248 -34162305 + AT_rich Low_complexity Low_complexity 1 21 0 1885 147 0 33 chr17 55342258 55342557 -34161996 - AluJb SINE Alu -23 289 1 2275 95 0 7 chr17 55343027 55343321 -34161232 + AluY SINE Alu 1 292 -19 1950 122 3 10 chr17 55343329 55343645 -34160908 + AluSc SINE Alu 5 309 0 2191 118 0 0 chr17 55343654 55343970 -34160583 + AluSq SINE Alu 1 313 0 674 77 11 0 chr17 55343973 55344064 -34160489 + L1PB2 LINE L1 6057 6148 -3 548 110 25 8 chr17 55344065 55344183 -34160370 + (TA)n Simple_repeat Simple_repeat 1 120 0 2215 95 3 7 chr17 55344194 55344489 -34160064 - AluSx SINE Alu -18 294 1 218 368 0 0 chr17 55344565 55344633 -34159920 - L2 LINE L2 -335 2978 2911 2007 102 55 4 chr17 55344752 55345027 -34159526 + AluSg SINE Alu 1 289 -21 1642 154 6 50 chr17 55345490 55345809 -34158744 + AluJb SINE Alu 1 305 -7 180 0 0 0 chr17 55346005 55346025 -34158528 + (TTG)n Simple_repeat Simple_repeat 2 21 0 180 0 0 0 chr17 55346497 55346517 -34158036 + (A)n Simple_repeat Simple_repeat 1 20 0 937 245 88 62 chr17 55346681 55347144 -34157409 + L1MC5 LINE L1 7315 7799 -162 1537 159 0 83 chr17 55347144 55347458 -34157095 + AluJo SINE Alu 1 288 -24 937 245 88 62 chr17 55347458 55347595 -34156958 + L1MC5 LINE L1 7799 7931 -30 914 173 0 0 chr17 55347605 55347738 -34156815 + FLAM_C SINE Alu 1 133 0 368 243 33 97 chr17 55347812 55347933 -34156620 + L1M4 LINE L1 5664 5778 -400 2387 77 23 0 chr17 55347933 55348233 -34156320 + AluY SINE Alu 1 307 -4 368 243 33 97 chr17 55348233 55348272 -34156281 + L1M4 LINE L1 5778 5818 -360 854 287 109 65 chr17 55348278 55349019 -34155534 + HAL1 LINE L1 310 1083 -1424 674 201 25 31 chr17 55349025 55349184 -34155369 + L1MC5 LINE L1 7039 7196 -765 405 204 0 11 chr17 55349214 55349302 -34155251 - L1MC5 LINE L1 -381 7580 7494 2407 71 3 7 chr17 55349526 55349835 -34154718 + AluY SINE Alu 1 308 -3 1557 124 26 130 chr17 55349840 55350179 -34154374 + AluYb8 SINE Alu 1 304 -14 493 95 0 86 chr17 55350183 55350584 -34153969 + (TA)n Simple_repeat Simple_repeat 1 366 0 2056 134 0 13 chr17 55350586 55350891 -34153662 + AluSx SINE Alu 12 312 0 323 288 181 44 chr17 55350908 55351300 -34153253 + L1ME1 LINE L1 5455 5854 -312 2889 180 85 31 chr17 55351312 55351867 -34152686 + MER21B LTR ERV1 1 585 -278 701 194 8 16 chr17 55351912 55352041 -34152512 + FLAM_A SINE Alu 1 128 -5 228 182 0 0 chr17 55352056 55352100 -34152453 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1183 133 58 66 chr17 55352101 55352305 -34152248 + MER21B LTR ERV1 575 778 -85 1888 136 0 82 chr17 55352305 55352636 -34151917 - AluJb SINE Alu -8 304 1 1183 133 58 66 chr17 55352636 55352672 -34151881 + MER21B LTR ERV1 778 813 -50 550 133 20 31 chr17 55352688 55352786 -34151767 - U13 snRNA snRNA -2 102 6 2068 99 7 3 chr17 55352999 55353304 -34151249 - AluSq SINE Alu 0 306 1 2230 102 0 3 chr17 55353332 55353635 -34150918 + AluSc SINE Alu 1 302 -7 2425 90 3 0 chr17 55353664 55353974 -34150579 + AluSp SINE Alu 1 311 -2 566 172 0 0 chr17 55354003 55354090 -34150463 - Tigger4(Zombi) DNA MER2_type -2644 87 1 270 0 0 0 chr17 55354272 55354302 -34150251 + (A)n Simple_repeat Simple_repeat 1 30 0 2010 149 0 0 chr17 55354330 55354631 -34149922 + AluSx SINE Alu 1 301 -11 1538 152 19 95 chr17 55354835 55355150 -34149403 + AluJb SINE Alu 1 291 -21 2151 109 7 3 chr17 55355151 55355444 -34149109 + AluSp SINE Alu 1 294 -19 2314 108 0 3 chr17 55355578 55355884 -34148669 + AluSc SINE Alu 1 305 -4 2208 99 0 3 chr17 55356155 55356437 -34148116 - AluSq SINE Alu -32 281 1 1776 151 3 70 chr17 55356613 55356944 -34147609 + AluSx SINE Alu 1 309 -3 2201 112 0 7 chr17 55357020 55357315 -34147238 - AluSx SINE Alu -18 294 2 538 158 198 0 chr17 55357337 55357438 -34147115 - FLAM_A SINE Alu -12 121 1 547 205 0 0 chr17 55358157 55358240 -34146313 + AluJ/FLAM SINE Alu 2 84 -228 209 261 235 8 chr17 55358242 55358361 -34146192 - L2 LINE L2 -561 2753 2608 * 248 283 212 0 chr17 55358360 55358459 -34146094 - L2 LINE L2 0 3313 3194 * 371 331 216 3 chr17 55358455 55358760 -34145793 - L2 LINE L2 -702 2612 2243 * 491 224 37 19 chr17 55358758 55358865 -34145688 + L2 LINE L2 3192 3300 -13 2036 142 3 0 chr17 55358867 55359162 -34145391 + AluSp SINE Alu 1 296 -17 2772 14 0 0 chr17 55359164 55359459 -34145094 + AluY SINE Alu 1 295 -16 1247 73 0 0 chr17 55359459 55359645 -34144908 + AluY SINE Alu 133 318 0 239 318 87 8 chr17 55359772 55359898 -34144655 - L2 LINE L2 -1246 2068 1933 2461 56 13 3 chr17 55360101 55360403 -34144150 + AluY SINE Alu 1 305 -6 1772 149 53 20 chr17 55360495 55360615 -34143938 + AluJo SINE Alu 1 116 -196 468 0 0 0 chr17 55360615 55360667 -34143886 + (CA)n Simple_repeat Simple_repeat 2 53 0 1772 149 53 20 chr17 55360667 55360847 -34143706 + AluJo SINE Alu 116 311 -1 429 203 55 93 chr17 55360877 55361028 -34143525 + L2 LINE L2 3127 3282 -31 2152 134 0 16 chr17 55361028 55361334 -34143219 + AluSx SINE Alu 2 302 -10 2325 103 7 3 chr17 55361336 55361638 -34142915 + AluSg SINE Alu 3 305 -5 429 203 55 93 chr17 55361638 55361665 -34142888 + L2 LINE L2 3283 3301 -12 781 138 46 8 chr17 55361780 55361910 -34142643 + AluJo SINE Alu 2 136 -176 2330 89 13 13 chr17 55361969 55362271 -34142282 + AluSg SINE Alu 1 302 -8 916 184 0 0 chr17 55362291 55362438 -34142115 + FRAM SINE Alu 11 157 -19 1960 159 3 0 chr17 55362622 55362917 -34141636 + AluSq SINE Alu 6 301 -12 1751 166 0 54 chr17 55362996 55363309 -34141244 - AluJo SINE Alu -16 296 1 869 112 0 8 chr17 55363331 55363456 -34141097 - AluSp/q SINE Alu -2 311 188 1730 92 5 0 chr17 55363456 55363674 -34140879 - AluSp SINE Alu -94 219 1 2493 97 0 0 chr17 55363738 55364047 -34140506 - AluSg SINE Alu -1 309 1 353 304 31 39 chr17 55364175 55364217 -34140336 + L1MC4 LINE L1 7607 7648 -391 194 0 39 0 chr17 55364217 55364243 -34140310 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 1721 193 0 0 chr17 55364244 55364524 -34140029 - AluJb SINE Alu -32 280 1 353 304 31 39 chr17 55364524 55364671 -34139882 + L1MC4 LINE L1 7647 7877 -162 1913 146 34 0 chr17 55364921 55365216 -34139337 + AluJb SINE Alu 1 305 -7 2377 70 13 0 chr17 55365351 55365649 -34138904 + AluY SINE Alu 1 302 -9 2082 135 3 3 chr17 55366106 55366409 -34138144 - AluSx SINE Alu -3 309 7 845 173 0 0 chr17 55366764 55366897 -34137656 + FLAM_C SINE Alu 1 133 0 2291 97 10 7 chr17 55366903 55367211 -34137342 + AluSc SINE Alu 1 309 0 1294 129 49 105 chr17 55367211 55367497 -34137056 + AluJb SINE Alu 36 305 -7 2355 109 3 0 chr17 55367585 55367896 -34136657 + AluSp SINE Alu 2 313 0 2215 132 0 0 chr17 55367910 55368220 -34136333 + AluSx SINE Alu 1 310 -2 1724 188 7 0 chr17 55368227 55368509 -34136044 + AluJb SINE Alu 1 284 -28 2245 103 0 3 chr17 55368556 55368848 -34135705 + AluSx SINE Alu 1 291 -21 2100 146 0 7 chr17 55368862 55369171 -34135382 + AluSg SINE Alu 1 307 -3 2290 122 0 0 chr17 55369182 55369478 -34135075 + AluSx SINE Alu 1 296 -16 1207 157 9 37 chr17 55369702 55369918 -34134635 - AluJo SINE Alu -16 296 87 2270 110 10 0 chr17 55370061 55370370 -34134183 + AluSp SINE Alu 1 312 -1 2198 142 0 0 chr17 55370548 55370858 -34133695 - AluSx SINE Alu -2 310 1 1688 168 25 18 chr17 55370996 55371281 -34133272 + AluJo SINE Alu 5 291 -21 234 310 215 5 chr17 55371338 55371538 -34133015 - L2 LINE L2 -243 3070 2829 2392 80 10 7 chr17 55371943 55372245 -34132308 + AluSg1 SINE Alu 1 303 -6 2118 94 36 36 chr17 55372364 55372673 -34131880 + AluSx SINE Alu 1 309 -3 1701 132 54 34 chr17 55373270 55373565 -34130988 + AluSx SINE Alu 1 301 -11 197 254 93 110 chr17 55373805 55373923 -34130630 - L2 LINE L2 -2 3270 3155 25 31 0 0 chr17 55374795 55374827 -34129726 + GC_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr17 55375182 55375210 -34129343 + GC_rich Low_complexity Low_complexity 1 28 0 225 180 0 0 chr17 55375249 55375299 -34129254 + (CTGGGG)n Simple_repeat Simple_repeat 2 51 0 26 0 0 0 chr17 55375378 55375404 -34129149 + GC_rich Low_complexity Low_complexity 1 26 0 43 64 0 0 chr17 55375413 55375491 -34129062 + GC_rich Low_complexity Low_complexity 1 78 0 428 245 49 49 chr17 55375714 55375857 -34128696 - MIR SINE MIR -69 193 51 868 161 39 17 chr17 55376006 55376186 -34128367 + L1MB8 LINE L1 5995 6178 0 2380 95 3 3 chr17 55377201 55377506 -34127047 + AluSg SINE Alu 1 305 -5 368 184 50 0 chr17 55377644 55377736 -34126817 + L1MB8 LINE L1 5727 5822 -352 692 125 108 8 chr17 55377758 55377878 -34126675 + FLAM_C SINE Alu 6 137 -6 2379 88 3 22 chr17 55377886 55378205 -34126348 + AluSp SINE Alu 1 313 0 2367 101 0 3 chr17 55378243 55378539 -34126014 - AluSq SINE Alu -16 297 3 1250 134 133 57 chr17 55378539 55378852 -34125701 + L1MB8 LINE L1 5843 6178 0 2374 90 7 0 chr17 55378880 55379180 -34125373 + AluSx SINE Alu 5 306 -6 190 302 19 0 chr17 55379375 55379428 -34125125 + MIR3 SINE MIR 112 165 -43 1236 198 7 29 chr17 55379429 55379707 -34124846 + AluJo SINE Alu 29 300 -12 513 120 40 0 chr17 55379719 55379819 -34124734 + GA-rich Low_complexity Low_complexity 1 104 0 2192 134 0 0 chr17 55379833 55380138 -34124415 - AluSq SINE Alu -8 305 1 2371 97 0 10 chr17 55380154 55380454 -34124099 - AluSc SINE Alu -12 297 1 2211 101 0 11 chr17 55381175 55381462 -34123091 - AluSx SINE Alu -20 292 9 2305 117 7 0 chr17 55381468 55381776 -34122777 - AluSx SINE Alu -2 310 1 1682 162 44 14 chr17 55381782 55382078 -34122475 - AluJb SINE Alu -7 305 1 3166 141 2 8 chr17 55382441 55382930 -34121623 - MER66B LTR ERV1 0 486 1 2418 107 0 0 chr17 55383000 55383309 -34121244 + AluSc SINE Alu 1 309 0 2341 101 10 0 chr17 55383321 55383628 -34120925 + AluSg SINE Alu 1 310 0 2110 138 0 3 chr17 55383641 55383937 -34120616 + AluSx SINE Alu 1 295 -17 2229 103 0 23 chr17 55384531 55384832 -34119721 - AluSc SINE Alu -15 294 1 892 210 6 6 chr17 55384875 55385042 -34119511 + FRAM SINE Alu 1 159 -17 2075 112 0 51 chr17 55385180 55385492 -34119061 - AluSg SINE Alu -14 296 1 261 367 40 11 chr17 55385551 55385728 -34118825 - L2 LINE L2 -808 2506 2325 1397 146 0 171 chr17 55385866 55386229 -34118324 - AluJo SINE Alu -11 301 1 2161 110 3 3 chr17 55386411 55386701 -34117852 + AluSx SINE Alu 1 290 -22 235 213 21 0 chr17 55386701 55386748 -34117805 + GA-rich Low_complexity Low_complexity 1 48 0 248 282 13 51 chr17 55386748 55386826 -34117727 - MIR3 SINE MIR -30 178 104 2292 125 0 0 chr17 55387153 55387465 -34117088 + AluSx SINE Alu 1 312 0 2234 111 7 0 chr17 55388285 55388582 -34115971 - AluSq SINE Alu -14 299 1 2238 102 20 7 chr17 55388584 55388879 -34115674 - AluSx SINE Alu -13 299 1 872 175 96 93 chr17 55388938 55389029 -34115524 + MIR SINE MIR 16 105 -157 2501 70 3 3 chr17 55389029 55389331 -34115222 - AluY SINE Alu -9 302 1 872 175 96 93 chr17 55389331 55389479 -34115074 + MIR SINE MIR 105 250 -12 1509 113 50 103 chr17 55389479 55389660 -34114893 + THE1B LTR MaLR 1 190 -174 2391 92 0 0 chr17 55389660 55389954 -34114599 + AluSq SINE Alu 2 295 -18 1836 117 51 15 chr17 55389964 55390262 -34114291 + AluSx SINE Alu 1 308 0 1509 113 50 103 chr17 55390262 55390368 -34114185 + THE1B LTR MaLR 199 284 -80 1276 143 46 32 chr17 55390423 55390640 -34113913 - AluJo SINE Alu -92 220 1 397 274 156 52 chr17 55390780 55390987 -34113566 + L3 LINE CR1 1133 1317 -260 2202 110 3 3 chr17 55390987 55391300 -34113253 + AluSx SINE Alu 1 312 0 2396 94 3 3 chr17 55391303 55391610 -34112943 + AluSg SINE Alu 2 308 -2 397 274 156 52 chr17 55391610 55391763 -34112790 + L3 LINE CR1 1318 1535 -42 2290 113 3 0 chr17 55391766 55392077 -34112476 - AluSq SINE Alu -1 312 1 2337 103 3 0 chr17 55392573 55392875 -34111678 + AluSp SINE Alu 1 303 -10 1327 86 124 24 chr17 55392887 55392969 -34111584 + MER30 DNA MER1_type 1 73 -157 1881 157 13 17 chr17 55392969 55393269 -34111284 + AluSx SINE Alu 1 299 -13 1327 86 124 24 chr17 55393269 55393395 -34111158 + MER30 DNA MER1_type 73 230 0 1184 159 0 82 chr17 55393557 55393790 -34110763 + AluJb SINE Alu 86 299 -13 810 176 0 0 chr17 55393943 55394068 -34110485 + FLAM_C SINE Alu 1 125 -18 2182 119 0 0 chr17 55394083 55394378 -34110175 + AluSq SINE Alu 1 295 -18 2074 144 3 3 chr17 55394748 55395054 -34109499 + AluSx SINE Alu 1 306 -6 2086 89 0 109 chr17 55395058 55395406 -34109147 + AluSx SINE Alu 3 312 0 2089 115 0 17 chr17 55395426 55395622 -34108931 - AluSx SINE Alu 0 330 132 2158 122 3 3 chr17 55395622 55395962 -34108591 - AluSc SINE Alu 0 309 1 2314 113 0 0 chr17 55395964 55396266 -34108287 - AluSg SINE Alu -8 302 1 2089 115 0 17 chr17 55396266 55396401 -34108152 - AluSx SINE Alu -199 131 1 297 285 62 39 chr17 55396470 55396600 -34107953 + MLT1I LTR MaLR 70 202 -207 1978 152 0 10 chr17 55396843 55397152 -34107401 + AluSx SINE Alu 1 306 -6 2376 76 13 0 chr17 55397778 55398082 -34106471 + AluSp SINE Alu 1 308 -5 1576 186 37 24 chr17 55398093 55398388 -34106165 + AluJo SINE Alu 1 299 -13 695 203 8 8 chr17 55398394 55398527 -34106026 + MIR SINE MIR 31 163 -99 1611 80 0 5 chr17 55398528 55398727 -34105826 + AluY SINE Alu 16 213 -98 869 127 15 22 chr17 55399546 55399680 -34104873 + FLAM_C SINE Alu 1 133 0 2048 124 0 11 chr17 55399826 55399959 -34104594 + AluSg SINE Alu 1 134 -175 2641 60 0 10 chr17 55399959 55400273 -34104280 + AluY SINE Alu 1 311 0 2048 124 0 11 chr17 55400273 55400451 -34104102 + AluSg SINE Alu 134 309 0 2339 107 7 0 chr17 55400456 55400764 -34103789 + AluSx SINE Alu 1 310 -2 846 162 0 34 chr17 55400764 55400906 -34103647 + AluJb SINE Alu 137 273 -39 333 0 0 0 chr17 55400923 55400960 -34103593 + (CA)n Simple_repeat Simple_repeat 2 38 0 612 289 46 10 chr17 55400960 55401157 -34103396 + MIR SINE MIR 58 261 -1 675 267 29 81 chr17 55401467 55401740 -34102813 - MIR SINE MIR -3 259 1 2207 123 7 0 chr17 55401759 55402069 -34102484 - AluSx SINE Alu 0 312 1 249 327 10 20 chr17 55402078 55402179 -34102374 + L2 LINE L2 2610 2709 -605 848 139 0 8 chr17 55402233 55402362 -34102191 - AluJb SINE Alu -179 133 6 1065 110 0 0 chr17 55402417 55402553 -34102000 - AluSg1 SINE Alu -173 136 1 2246 87 7 10 chr17 55402773 55403073 -34101480 - AluY SINE Alu -12 299 1 1493 176 3 59 chr17 55403084 55403279 -34101274 - AluJo SINE Alu -23 289 85 3446 114 67 76 chr17 55403279 55403419 -34101134 - MER41B LTR ERV1 0 635 495 2308 105 3 0 chr17 55403419 55403723 -34100830 + AluSc SINE Alu 1 305 -4 3446 114 67 76 chr17 55403723 55404088 -34100465 - MER41B LTR ERV1 -140 495 135 2302 105 10 0 chr17 55404088 55404382 -34100171 - AluSx SINE Alu -15 297 1 3446 114 67 76 chr17 55404382 55404516 -34100037 - MER41B LTR ERV1 -500 135 1 1493 176 3 59 chr17 55404516 55404626 -34099927 - AluJo SINE Alu -227 85 1 3683 144 31 51 chr17 55404630 55405072 -34099481 - L1MD2 LINE L1 -362 5997 5587 2742 29 3 0 chr17 55405072 55405381 -34099172 + AluY SINE Alu 1 310 -1 3683 144 31 51 chr17 55405381 55405808 -34098745 - L1MD2 LINE L1 -772 5587 5153 2248 82 4 0 chr17 55405815 55406125 -34098428 + AluSx SINE Alu 2 312 0 2080 125 0 10 chr17 55406125 55406262 -34098291 + AluSx SINE Alu 1 138 -174 2505 81 0 0 chr17 55406262 55406572 -34097981 + AluSg SINE Alu 1 310 0 2080 125 0 10 chr17 55406572 55406738 -34097815 + AluSx SINE Alu 138 301 -11 2297 99 0 0 chr17 55406760 55407072 -34097481 - AluSx SINE Alu 0 312 1 709 246 49 23 chr17 55407072 55407336 -34097217 - L1MD2 LINE L1 -979 5167 4897 410 258 112 37 chr17 55407503 55407763 -34096790 + L2 LINE L2 2963 3303 -10 301 220 176 0 chr17 55408396 55408487 -34096066 + L2 LINE L2 3164 3270 -2 189 175 100 25 chr17 55408499 55408539 -34096014 - L2 LINE L2 -2 3270 3228 228 196 0 71 chr17 55408974 55409030 -34095523 + MIR3 SINE MIR 130 181 -27 270 185 31 31 chr17 55409189 55409254 -34095299 + MIR3 SINE MIR 112 176 -32 225 276 35 69 chr17 55409380 55409467 -34095086 + L2 LINE L2 3186 3269 -3 2074 123 7 17 chr17 55409469 55409771 -34094782 + AluSx SINE Alu 1 299 -13 810 153 0 0 chr17 55409779 55409903 -34094650 + FLAM_C SINE Alu 1 124 -9 1494 129 0 0 chr17 55410922 55411123 -34093430 + AluSq SINE Alu 6 206 -107 2433 82 7 0 chr17 55411123 55411426 -34093127 + AluSq SINE Alu 1 305 -8 596 100 30 40 chr17 55411432 55411532 -34093021 + AluSg/x SINE Alu 197 295 -14 261 100 50 0 chr17 55411671 55411711 -34092842 + Alu SINE Alu 6 47 -253 198 103 0 0 chr17 55411720 55411749 -34092804 + (A)n Simple_repeat Simple_repeat 1 29 0 1667 155 83 14 chr17 55411804 55412082 -34092471 - MSTD LTR MaLR -99 297 1 290 337 128 10 chr17 55412108 55412304 -34092249 - MIR SINE MIR -14 248 30 2142 118 0 0 chr17 55412510 55412799 -34091754 + AluSx SINE Alu 1 289 -23 1118 149 17 0 chr17 55412802 55412976 -34091577 + AluJo/FRAM SINE Alu 132 308 -4 1345 137 0 73 chr17 55413684 55413831 -34090722 + AluJo SINE Alu 1 127 -185 1982 118 18 4 chr17 55413831 55414133 -34090420 + AluSx SINE Alu 1 306 0 1345 137 0 73 chr17 55414133 55414218 -34090335 + AluJo SINE Alu 127 217 -95 431 355 43 27 chr17 55414783 55415119 -34089434 - L2 LINE L2 -243 3070 2714 2469 69 0 3 chr17 55415119 55415422 -34089131 - AluY SINE Alu -9 302 1 431 355 43 27 chr17 55415422 55415507 -34089046 - L2 LINE L2 -599 2714 2632 231 250 16 16 chr17 55416743 55416807 -34087746 - L2 LINE L2 -8 3264 3201 522 164 227 18 chr17 55416831 55416941 -34087612 + FLAM_A SINE Alu 1 133 0 1350 196 35 14 chr17 55416946 55417231 -34087322 + AluJo SINE Alu 1 291 -21 1840 141 21 7 chr17 55417467 55417757 -34086796 + AluJo SINE Alu 1 294 -18 467 245 102 7 chr17 55417862 55418009 -34086544 - MLT1J LTR MaLR -239 272 112 2035 124 3 13 chr17 55418009 55418307 -34086246 - AluJb SINE Alu -13 299 5 2391 99 0 3 chr17 55418317 55418630 -34085923 - AluSx SINE Alu 0 312 1 2517 72 0 3 chr17 55418783 55419088 -34085465 - AluY SINE Alu -7 304 1 2366 89 0 7 chr17 55419091 55419393 -34085160 - AluSg SINE Alu -10 300 1 261 0 0 0 chr17 55420628 55420657 -34083896 + (TG)n Simple_repeat Simple_repeat 2 30 0 1559 166 68 10 chr17 55422218 55422328 -34082225 + AluJo SINE Alu 1 103 -209 207 0 0 0 chr17 55422328 55422351 -34082202 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1559 166 68 10 chr17 55422351 55422535 -34082018 + AluJo SINE Alu 103 312 0 231 140 0 70 chr17 55422586 55422643 -34081910 - LTR66 LTR ERVL -166 444 392 1280 99 0 0 chr17 55423034 55423196 -34081357 + AluSg/x SINE Alu 134 295 -17 1024 97 10 4 chr17 55423276 55423482 -34081071 + AluSx SINE Alu 2 289 -21 2242 87 20 17 chr17 55423673 55423972 -34080581 + AluSg SINE Alu 1 300 -10 2176 108 20 0 chr17 55424655 55424952 -34079601 - AluSx SINE Alu -9 303 1 2087 91 28 24 chr17 55425031 55425318 -34079235 + AluSq SINE Alu 14 301 -12 2367 68 4 0 chr17 55426369 55426649 -34077904 - AluSp SINE Alu -32 281 1 934 136 0 90 chr17 55426651 55426828 -34077725 - AluSg/x SINE Alu -15 297 137 2304 92 0 0 chr17 55427317 55427610 -34076943 - AluSg1 SINE Alu -16 293 1 2347 195 95 14 chr17 55427655 55428019 -34076534 + MER21B LTR ERV1 3 336 -527 619 200 32 16 chr17 55428019 55428144 -34076409 - FLAM_A SINE Alu -6 127 1 2347 195 95 14 chr17 55428144 55428407 -34076146 + MER21B LTR ERV1 336 746 -117 207 247 27 14 chr17 55428662 55428735 -34075818 - MER5A DNA MER1_type -97 92 19 414 264 169 0 chr17 55428762 55428963 -34075590 - MIR SINE MIR -24 238 4 2254 91 3 10 chr17 55428964 55429262 -34075291 - AluSg SINE Alu -14 296 1 22 0 0 0 chr17 55429262 55429284 -34075269 + AT_rich Low_complexity Low_complexity 1 22 0 2187 102 10 0 chr17 55429450 55429744 -34074809 + AluSq SINE Alu 1 297 -16 1552 176 50 4 chr17 55429809 55430087 -34074466 - AluSg SINE Alu -19 291 1 21 0 0 0 chr17 55430131 55430152 -34074401 + AT_rich Low_complexity Low_complexity 1 21 0 454 157 0 0 chr17 55430187 55430257 -34074296 + AluJ/FLAM SINE Alu 1 70 -242 2314 102 0 7 chr17 55430325 55430628 -34073925 + AluSg SINE Alu 1 301 -9 2409 92 0 10 chr17 55430629 55430935 -34073618 + AluSc SINE Alu 2 304 -5 198 0 0 0 chr17 55430935 55430957 -34073596 + (TA)n Simple_repeat Simple_repeat 2 23 0 2023 72 0 0 chr17 55431335 55431584 -34072969 + AluY SINE Alu 55 303 -8 23 0 0 0 chr17 55432453 55432476 -34072077 + AT_rich Low_complexity Low_complexity 1 23 0 477 0 0 0 chr17 55433997 55434050 -34070503 + (TA)n Simple_repeat Simple_repeat 2 54 0 2330 82 3 20 chr17 55435534 55435837 -34068716 - AluSc SINE Alu -11 298 1 24 32 0 0 chr17 55435892 55435923 -34068630 + AT_rich Low_complexity Low_complexity 1 31 0 1148 179 21 0 chr17 55435976 55436166 -34068387 + AluJo SINE Alu 86 279 -33 250 293 0 0 chr17 55436208 55436266 -34068287 + AluY SINE Alu 135 192 -109 349 246 0 0 chr17 55436371 55436436 -34068117 - AluJ/FLAM SINE Alu -236 66 2 2100 130 3 7 chr17 55436638 55436938 -34067615 - AluSx SINE Alu -13 299 1 1036 93 0 0 chr17 55437470 55437599 -34066954 - AluSg SINE Alu -181 129 1 2131 98 9 68 chr17 55437679 55438004 -34066549 - AluSx SINE Alu -6 306 1 23 33 0 0 chr17 55438185 55438215 -34066338 + AT_rich Low_complexity Low_complexity 1 30 0 2363 60 7 3 chr17 55441007 55441319 -34063234 + AluY SINE Alu 1 313 0 1434 147 104 29 chr17 55441653 55441932 -34062621 + AluJo SINE Alu 1 300 -12 2270 119 3 0 chr17 55442080 55442391 -34062162 + AluSx SINE Alu 1 312 0 2637 43 7 0 chr17 55443266 55443570 -34060983 - AluSp SINE Alu -7 306 1 22 35 0 0 chr17 55443651 55443680 -34060873 + AT_rich Low_complexity Low_complexity 1 29 0 566 227 0 0 chr17 55443703 55443813 -34060740 + MER46C DNA MER2_type 224 333 -5 614 103 154 43 chr17 55444802 55444919 -34059634 - FLAM_C SINE Alu -3 130 1 22 35 0 0 chr17 55444920 55444949 -34059604 + AT_rich Low_complexity Low_complexity 1 29 0 1937 166 3 13 chr17 55444949 55445263 -34059290 + AluJb SINE Alu 1 311 -1 189 0 0 0 chr17 55445263 55445284 -34059269 + (TA)n Simple_repeat Simple_repeat 1 21 0 1657 170 3 33 chr17 55445311 55445611 -34058942 + AluJb SINE Alu 1 291 -21 1491 92 36 0 chr17 55445769 55445965 -34058588 - AluSp SINE Alu -8 305 103 2198 111 0 3 chr17 55446096 55446393 -34058160 - AluSc SINE Alu -13 296 1 1885 145 0 10 chr17 55448136 55448433 -34056120 - AluJo SINE Alu -18 294 1 2034 141 10 0 chr17 55448800 55449105 -34055448 + AluSx SINE Alu 1 308 -4 1544 154 16 61 chr17 55449113 55449424 -34055129 + AluJo SINE Alu 1 297 -15 1990 138 0 14 chr17 55450433 55450724 -34053829 - AluJb SINE Alu -25 287 1 1957 106 4 0 chr17 55450738 55450992 -34053561 - AluSx SINE Alu -13 299 45 2049 129 10 3 chr17 55451122 55451417 -34053136 + AluSx SINE Alu 1 297 -15 698 23 11 0 chr17 55451542 55451630 -34052923 + (TA)n Simple_repeat Simple_repeat 2 90 0 1768 136 0 0 chr17 55451634 55451877 -34052676 - AluSx SINE Alu -32 280 38 1494 165 81 44 chr17 55452022 55452319 -34052234 - AluJo SINE Alu -4 308 1 370 200 0 13 chr17 55453187 55453262 -34051291 - AluJ/FLAM SINE Alu -228 74 1 1960 147 27 0 chr17 55453316 55453608 -34050945 - AluSx SINE Alu -12 300 1 1757 111 89 7 chr17 55453608 55453879 -34050674 - AluSq SINE Alu -10 303 11 1909 94 8 0 chr17 55453964 55454209 -34050344 - AluSg SINE Alu -20 290 44 2230 118 0 3 chr17 55454329 55454635 -34049918 - AluY SINE Alu -4 307 3 240 237 17 0 chr17 55454732 55454791 -34049762 - MER5B DNA MER1_type -2 176 117 1525 186 36 27 chr17 55454793 55455094 -34049459 + AluJo SINE Alu 1 304 -8 2108 138 0 0 chr17 55455095 55455391 -34049162 + AluJb SINE Alu 2 297 -15 1294 178 142 18 chr17 55455392 55455667 -34048886 + AluJo SINE Alu 2 310 -2 1886 110 82 18 chr17 55457928 55458209 -34046344 - AluSx SINE Alu -13 299 1 917 181 16 32 chr17 55458506 55458694 -34045859 - MER5A DNA MER1_type -1 188 4 1050 135 0 0 chr17 55458766 55458914 -34045639 - AluSg/x SINE Alu -9 301 154 345 177 26 0 chr17 55458914 55459027 -34045526 + (TA)n Simple_repeat Simple_repeat 2 117 0 2187 104 7 0 chr17 55459034 55459313 -34045240 - AluSx SINE Alu -31 281 1 25 0 0 0 chr17 55460315 55460340 -34044213 + AT_rich Low_complexity Low_complexity 1 25 0 744 149 0 37 chr17 55460785 55460919 -34043634 - FLAM_C SINE Alu -3 130 2 1164 196 67 10 chr17 55460988 55461280 -34043273 + MER58B DNA MER1_type 33 341 0 21 0 0 0 chr17 55463339 55463360 -34041193 + AT_rich Low_complexity Low_complexity 1 21 0 2054 104 39 0 chr17 55464524 55464803 -34039750 - AluSx SINE Alu -22 290 1 2198 120 0 0 chr17 55464986 55465313 -34039240 + AluSx SINE Alu 1 327 0 1990 136 27 0 chr17 55465380 55465675 -34038878 + AluSx SINE Alu 6 308 -4 1713 164 10 51 chr17 55465723 55466034 -34038519 + AluJb SINE Alu 1 298 -14 2179 110 0 0 chr17 55466590 55466901 -34037652 + AluSg SINE Alu 1 311 0 1784 103 122 11 chr17 55467277 55467540 -34037013 - AluSq SINE Alu -21 292 1 1947 155 24 0 chr17 55467553 55467844 -34036709 - AluJb SINE Alu -14 298 1 235 253 27 40 chr17 55468148 55468223 -34036330 + MIR3 SINE MIR 126 199 -9 374 239 0 9 chr17 55468544 55468653 -34035900 + (TA)n Simple_repeat Simple_repeat 1 108 0 839 171 0 0 chr17 55468656 55468779 -34035774 - FLAM_C SINE Alu -20 123 1 2429 82 3 0 chr17 55470440 55470744 -34033809 - AluSq SINE Alu -8 305 1 21 57 0 0 chr17 55470944 55470979 -34033574 + AT_rich Low_complexity Low_complexity 1 35 0 234 234 31 0 chr17 55471198 55471262 -34033291 + MER116 DNA Mariner 1 66 -14 686 189 16 0 chr17 55471270 55471392 -34033161 - FLAM_C SINE Alu -17 126 3 847 161 0 21 chr17 55471431 55471574 -34032979 + FLAM_C SINE Alu 1 140 -3 2011 123 35 0 chr17 55472124 55472409 -34032144 - AluSg SINE Alu -15 295 1 287 284 43 7 chr17 55472602 55472743 -34031810 + (CTTA)n Simple_repeat Simple_repeat 2 147 0 2316 123 0 0 chr17 55472759 55473069 -34031484 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr17 55473790 55473818 -34030735 + AT_rich Low_complexity Low_complexity 1 28 0 248 186 0 0 chr17 55475254 55475297 -34029256 - L2 LINE L2 -8 3264 3222 1643 181 0 17 chr17 55475523 55475815 -34028738 + AluJo SINE Alu 1 287 -25 211 27 27 27 chr17 55475818 55475855 -34028698 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1839 161 39 15 chr17 55476081 55476417 -34028136 - MER2 DNA MER2_type 0 344 1 183 312 235 12 chr17 55476430 55476600 -34027953 + L3 LINE CR1 117 324 -1253 374 238 38 29 chr17 55476648 55476753 -34027800 + L2 LINE L2 3192 3297 -16 * 737 294 88 79 chr17 55476747 55476905 -34027648 + L3 LINE CR1 363 518 -1059 2174 112 23 3 chr17 55476905 55477210 -34027343 - AluSx SINE Alu 0 312 2 737 294 88 79 chr17 55477210 55477321 -34027232 + L3 LINE CR1 518 627 -950 2120 98 17 17 chr17 55477321 55477616 -34026937 - AluSc SINE Alu -14 295 1 737 294 88 79 chr17 55477616 55477763 -34026790 + L3 LINE CR1 627 771 -806 1740 175 7 13 chr17 55477763 55478066 -34026487 + AluJb SINE Alu 1 301 -11 1946 139 7 0 chr17 55478068 55478348 -34026205 + AluSx SINE Alu 3 284 -28 737 294 88 79 chr17 55478348 55478587 -34025966 + L3 LINE CR1 771 1029 -548 425 167 14 0 chr17 55478641 55478713 -34025840 + MER81 DNA DNA 42 114 0 384 271 56 144 chr17 55478720 55479059 -34025494 + L3 LINE CR1 1114 1422 -155 1517 169 16 54 chr17 55479845 55480159 -34024394 - AluJb SINE Alu 0 312 11 290 225 20 14 chr17 55480159 55480265 -34024288 - AluJ/FLAM SINE Alu -226 76 1 781 111 0 97 chr17 55480265 55480298 -34024255 + AluJo SINE Alu 5 40 -272 2258 109 0 0 chr17 55480298 55480591 -34023962 - AluSx SINE Alu -19 293 1 781 111 0 97 chr17 55480591 55480685 -34023868 + AluJo SINE Alu 40 119 -193 216 86 0 0 chr17 55480685 55480720 -34023833 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 781 111 0 97 chr17 55480720 55480735 -34023818 + AluJo SINE Alu 119 134 -178 1615 146 55 22 chr17 55480742 55481040 -34023513 + AluJb SINE Alu 1 307 0 1990 153 3 3 chr17 55481142 55481443 -34023110 - AluSx SINE Alu -11 301 1 2492 81 0 0 chr17 55481473 55481781 -34022772 + AluY SINE Alu 1 308 -3 1960 161 0 0 chr17 55481791 55482076 -34022477 + AluJb SINE Alu 1 285 -27 2288 108 0 7 chr17 55482180 55482487 -34022066 + AluSx SINE Alu 1 305 -7 1851 72 4 36 chr17 55482633 55482909 -34021644 + L1PA13 LINE L1 5893 6159 -4 200 227 0 0 chr17 55483091 55483135 -34021418 + A-rich Low_complexity Low_complexity 1 44 0 1792 100 67 19 chr17 55483141 55483410 -34021143 + AluSx SINE Alu 1 282 -30 236 196 0 0 chr17 55483507 55483558 -34020995 + A-rich Low_complexity Low_complexity 1 51 0 888 150 0 0 chr17 55483560 55483700 -34020853 + FLAM_C SINE Alu 1 140 -3 775 269 50 50 chr17 55484101 55484173 -34020380 + MARNA DNA Mariner 93 164 -422 2433 77 7 0 chr17 55484173 55484470 -34020083 - AluY SINE Alu -12 299 1 775 269 50 50 chr17 55484470 55484754 -34019799 + MARNA DNA Mariner 163 449 -137 243 270 112 11 chr17 55484785 55484874 -34019679 + MIR SINE MIR 5 102 -160 443 291 154 5 chr17 55485091 55485339 -34019214 - L2 LINE L2 -290 3023 2746 2272 89 10 0 chr17 55485455 55485747 -34018806 - AluSg SINE Alu -15 295 1 255 168 261 42 chr17 55485967 55486086 -34018467 + MER103 DNA DNA 1 145 -21 978 276 72 46 chr17 55486488 55487031 -34017522 + L1ME1 LINE L1 314 870 -5249 536 233 83 22 chr17 55487037 55487265 -34017288 + L1ME1 LINE L1 976 1217 -4902 1694 164 0 61 chr17 55487268 55487598 -34016955 + AluJo SINE Alu 1 310 -2 394 247 81 46 chr17 55487727 55487901 -34016652 + HAL1 LINE L1 736 915 -1592 483 268 131 43 chr17 55487933 55488399 -34016154 + HAL1 LINE L1 1016 1522 -985 1837 235 56 37 chr17 55488460 55488620 -34015933 + L1ME1 LINE L1 3123 3278 -2851 2117 118 0 32 chr17 55488620 55488934 -34015619 + AluSx SINE Alu 1 304 -8 1837 235 56 37 chr17 55488934 55489206 -34015347 + L1ME1 LINE L1 3278 3543 -2586 2356 89 3 10 chr17 55489206 55489508 -34015045 - AluSp SINE Alu -13 300 1 1837 235 56 37 chr17 55489508 55489651 -34014902 + L1ME1 LINE L1 3543 3682 -2447 2096 137 0 7 chr17 55489651 55489950 -34014603 - AluSx SINE Alu -15 297 1 1837 235 56 37 chr17 55489950 55490190 -34014363 + L1ME1 LINE L1 3682 3956 -2173 1204 220 34 0 chr17 55490181 55490504 -34014049 + L1ME1 LINE L1 4484 4817 -1312 * 265 230 7 7 chr17 55490528 55490676 -34013877 + (TA)n Simple_repeat Simple_repeat 1 148 0 2160 134 3 0 chr17 55490758 55491057 -34013496 - AluSx SINE Alu -12 300 1 2034 197 110 40 chr17 55491233 55491528 -34013025 + L1ME1 LINE L1 4821 5094 -1055 2286 116 7 0 chr17 55491528 55491838 -34012715 + AluSx SINE Alu 1 312 0 2034 197 110 40 chr17 55491838 55492713 -34011840 + L1ME1 LINE L1 5094 6077 -72 371 164 254 22 chr17 55492632 55492766 -34011787 + L1MA10 LINE L1 6152 6316 -1 * 991 255 117 40 chr17 55492761 55493290 -34011263 + HAL1 LINE L1 1583 2152 -355 2215 128 0 0 chr17 55493330 55493626 -34010927 + AluSx SINE Alu 1 296 -16 356 327 92 0 chr17 55493920 55494073 -34010480 - L1MC4 LINE L1 -33 8009 7843 682 201 123 28 chr17 55494092 55494271 -34010282 - MER20 DNA MER1_type 0 219 24 549 285 65 4 chr17 55494316 55494576 -34009977 - L1MC4 LINE L1 -198 7844 7569 2404 189 72 38 chr17 55494658 55495352 -34009201 - L1MC3 LINE L1 -17 7768 7051 2277 240 120 49 chr17 55495434 55495493 -34009060 - L1MC4a LINE L1 -451 7357 7304 1854 143 20 7 chr17 55495493 55495786 -34008767 - AluJb SINE Alu -15 297 1 2277 240 120 49 chr17 55495786 55496088 -34008465 - L1MC4a LINE L1 -504 7304 7025 2038 114 14 10 chr17 55496088 55496378 -34008175 - AluSq SINE Alu -22 291 1 2277 240 120 49 chr17 55496378 55497093 -34007460 - L1MC4a LINE L1 -783 7025 6204 1772 218 90 27 chr17 55497203 55497794 -34006759 - L1MC4a LINE L1 -1754 6054 5427 643 245 171 19 chr17 55497825 55498204 -34006349 - L1MC4 LINE L1 -4 8038 7602 746 144 0 0 chr17 55498214 55498325 -34006228 - FLAM_A SINE Alu -18 124 14 1427 254 88 57 chr17 55498346 55498937 -34005616 - L1MC4 LINE L1 -477 7565 6943 1848 145 35 0 chr17 55498937 55499220 -34005333 - AluSx SINE Alu -19 293 1 1427 254 88 57 chr17 55499220 55499402 -34005151 - L1MC4 LINE L1 -1099 6943 6768 2177 90 7 10 chr17 55499422 55499712 -34004841 - AluSc SINE Alu -20 289 1 257 322 116 0 chr17 55500015 55500257 -34004296 - L1MC4a LINE L1 -1123 5023 4754 1480 135 82 11 chr17 55500603 55500947 -34003606 - Tigger4(Zombi) DNA MER2_type -1 2730 2 683 279 125 56 chr17 55501021 55501156 -34003397 - L1MC4a LINE L1 -1831 4315 4191 2207 105 0 14 chr17 55501156 55501452 -34003101 - AluSx SINE Alu -20 292 1 683 279 125 56 chr17 55501452 55501954 -34002599 - L1MC4a LINE L1 -1955 4191 3725 1810 182 0 10 chr17 55501954 55502262 -34002291 - AluJb SINE Alu -7 305 1 683 279 125 56 chr17 55502262 55502958 -34001595 - L1MC4a LINE L1 -2421 3725 2889 802 245 106 12 chr17 55502995 55503330 -34001223 - L1ME2 LINE L1 -106 6058 5667 1689 152 0 32 chr17 55503481 55503758 -34000795 + AluJb SINE Alu 1 268 -44 526 309 66 36 chr17 55503870 55504174 -34000379 - L1MC4a LINE L1 -3594 2552 2240 1873 138 0 34 chr17 55504426 55504717 -33999836 - AluJb SINE Alu -31 281 1 313 280 93 53 chr17 55504726 55504876 -33999677 - HAL1b LINE L1 -510 838 683 566 273 90 13 chr17 55504922 55505233 -33999320 - HAL1b LINE L1 -737 611 277 1899 148 4 0 chr17 55506306 55506577 -33997976 - AluSx SINE Alu -40 272 1 458 248 181 7 chr17 55506621 55506770 -33997783 - MIR SINE MIR -10 252 78 2026 126 6 31 chr17 55506956 55507273 -33997280 + AluSx SINE Alu 1 309 -3 398 237 111 29 chr17 55507402 55507609 -33996944 + HAL1 LINE L1 2284 2507 0 576 281 57 50 chr17 55507669 55507950 -33996603 + L1ME LINE L1 5482 5764 -357 207 331 110 13 chr17 55509121 55509275 -33995278 + MIR SINE MIR 44 212 -50 2273 113 0 0 chr17 55509513 55509815 -33994738 + AluSg SINE Alu 1 302 -8 1862 150 16 23 chr17 55510101 55510408 -33994145 - AluJb SINE Alu -5 307 3 195 341 68 0 chr17 55510414 55510502 -33994051 - L2 LINE L2 -10 3262 3169 279 274 36 51 chr17 55510732 55510881 -33993672 - MIR SINE MIR -53 155 38 318 295 100 35 chr17 55510943 55511107 -33993446 + MER5A DNA MER1_type 17 178 0 * 327 217 96 72 chr17 55511107 55511269 -33993284 + MER3 DNA MER1_type 40 205 -4 991 157 11 43 chr17 55511135 55511320 -33993233 - MER3 DNA MER1_type -30 179 1 191 255 130 59 chr17 55511323 55511424 -33993129 - MIR3 SINE MIR -50 158 49 522 238 139 35 chr17 55513565 55513737 -33990816 + L3 LINE CR1 1385 1574 -3 22 35 0 0 chr17 55515244 55515273 -33989280 + GC_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr17 55515447 55515490 -33989063 + GC_rich Low_complexity Low_complexity 1 43 0 637 240 54 54 chr17 55516051 55516293 -33988260 - L2 LINE L2 -39 3274 3033 2222 72 20 14 chr17 55516604 55516896 -33987657 - AluSg SINE Alu -16 294 1 313 234 0 0 chr17 55516967 55517031 -33987522 - AluJ/monomer SINE Alu -1 301 238 1253 162 5 22 chr17 55517138 55517360 -33987193 - AluJo SINE Alu -90 222 5 244 264 104 80 chr17 55517996 55518121 -33986432 - L1ME4a LINE L1 -39 6082 5955 494 303 104 9 chr17 55518121 55518332 -33986221 + MIR SINE MIR 14 244 -18 481 311 70 59 chr17 55518367 55518541 -33986012 - L1ME4a LINE L1 -202 5919 5748 2102 117 3 38 chr17 55518541 55518858 -33985695 - AluSx SINE Alu -6 306 1 481 311 70 59 chr17 55518858 55519142 -33985411 - L1ME4a LINE L1 -373 5748 5456 2167 122 14 0 chr17 55519200 55519495 -33985058 - AluSx SINE Alu -13 299 1 2015 135 3 0 chr17 55519779 55520075 -33984478 - AluSq SINE Alu -16 297 1 2127 117 7 3 chr17 55520075 55520374 -33984179 - AluSc SINE Alu -9 300 1 448 279 70 40 chr17 55521096 55521297 -33983256 - L1MC4 LINE L1 -72 7970 7764 819 178 203 12 chr17 55521382 55521545 -33983008 - AluJb SINE Alu -23 289 96 1356 143 22 22 chr17 55521545 55521775 -33982778 - AluJo SINE Alu -82 230 1 710 146 42 165 chr17 55521848 55522060 -33982493 - L1MB5 LINE L1 0 6174 5989 320 268 130 8 chr17 55522063 55522186 -33982367 - L1MC5 LINE L1 -553 7408 7271 458 292 30 6 chr17 55522243 55522411 -33982142 - L1MEc LINE L1 -6133 263 92 2377 65 0 52 chr17 55522513 55522838 -33981715 - AluY SINE Alu -3 308 1 247 336 51 29 chr17 55522855 55522992 -33981561 - L3 LINE CR1 -324 1253 1114 1953 154 0 25 chr17 55523518 55523837 -33980716 + AluJb SINE Alu 2 312 0 233 276 66 13 chr17 55524253 55524329 -33980224 - L3 LINE CR1 -15 1562 1483 279 0 0 0 chr17 55524352 55524383 -33980170 + (TG)n Simple_repeat Simple_repeat 2 32 0 1659 137 86 4 chr17 55524389 55524644 -33979909 - AluSg SINE Alu -34 276 1 1019 252 152 15 chr17 55524983 55525372 -33979181 - MLT1J1 LTR MaLR -4 442 1 298 279 108 23 chr17 55525384 55525513 -33979040 - MIR3 SINE MIR -50 158 19 247 241 128 35 chr17 55525668 55525809 -33978744 - L1MEc LINE L1 -4862 1343 1190 1253 153 18 48 chr17 55525815 55526043 -33978510 - AluJo SINE Alu -8 304 84 456 297 49 81 chr17 55526044 55526179 -33978374 - L1MEc LINE L1 -5046 1181 1043 2036 146 7 0 chr17 55526179 55526480 -33978073 - AluSx SINE Alu -9 303 1 456 297 49 81 chr17 55526480 55526599 -33977954 - L1MEc LINE L1 -5184 1043 922 2255 128 0 0 chr17 55526599 55526911 -33977642 - AluSx SINE Alu 0 312 1 456 297 49 81 chr17 55526911 55527053 -33977500 - L1MEc LINE L1 -5305 922 791 225 259 74 90 chr17 55527406 55527595 -33976958 - L3 LINE CR1 -600 977 792 23 0 0 0 chr17 55527691 55527714 -33976839 + AT_rich Low_complexity Low_complexity 1 23 0 569 187 22 0 chr17 55528160 55528287 -33976266 + FRAM SINE Alu 59 187 0 722 328 93 26 chr17 55528317 55528779 -33975774 + L2 LINE L2 2554 3054 -259 2089 83 7 35 chr17 55528949 55529262 -33975291 - AluSp SINE Alu 0 306 2 2340 97 3 0 chr17 55529428 55529727 -33974826 + AluSp SINE Alu 1 300 -13 1015 218 10 10 chr17 55531333 55531539 -33973014 - MER21B LTR ERV1 -428 435 230 237 264 308 22 chr17 55532092 55532183 -33972370 + MIR3 SINE MIR 8 124 -84 22 35 0 0 chr17 55532215 55532244 -33972309 + AT_rich Low_complexity Low_complexity 1 29 0 481 208 195 7 chr17 55532698 55532847 -33971706 - MER5A DNA MER1_type 0 189 13 1949 138 7 3 chr17 55535044 55535335 -33969218 + AluSx SINE Alu 1 292 -20 331 132 0 0 chr17 55535350 55535403 -33969150 + Alu SINE Alu 249 301 0 1734 133 4 0 chr17 55535408 55535649 -33968904 + AluSx SINE Alu 1 242 -70 216 0 0 0 chr17 55535654 55535678 -33968875 + (TA)n Simple_repeat Simple_repeat 2 25 0 590 181 35 49 chr17 55535860 55536004 -33968549 + LTR48B LTR ERV1 492 633 -11 1587 153 14 24 chr17 55536008 55536321 -33968232 + L1MD1 LINE L1 5915 8035 -7 31 68 0 0 chr17 55536755 55536814 -33967739 + AT_rich Low_complexity Low_complexity 1 59 0 401 114 0 14 chr17 55536986 55537056 -33967497 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 2220 123 3 3 chr17 55537371 55537681 -33966872 - AluSx SINE Alu -2 310 1 2168 110 3 0 chr17 55537683 55537973 -33966580 - AluSx SINE Alu -14 298 8 2106 118 7 3 chr17 55538130 55538427 -33966126 - AluSx SINE Alu -14 298 1 2226 125 0 0 chr17 55539291 55539604 -33964949 + AluSq SINE Alu 1 313 0 1889 162 59 6 chr17 55540066 55540387 -33964166 + MER44D DNA MER2_type 1 608 -1 1631 34 19 34 chr17 55541335 55541543 -33963010 - L1PA4 LINE L1 0 6155 5951 191 312 194 13 chr17 55541842 55542079 -33962474 - L2 LINE L2 -652 2662 2383 3100 160 32 46 chr17 55543182 55543698 -33960855 - MER68 LTR ERV1 0 562 53 2221 100 0 37 chr17 55543698 55544019 -33960534 - AluSg SINE Alu -1 309 1 3100 160 32 46 chr17 55544019 55544072 -33960481 - MER68 LTR ERV1 -509 53 1 2064 121 0 0 chr17 55544647 55544951 -33959602 + AluSx SINE Alu 2 305 0 620 119 0 0 chr17 55545624 55545708 -33958845 + AluS SINE Alu 1 84 -228 2157 133 3 13 chr17 55545966 55546281 -33958272 + AluSx SINE Alu 1 312 0 186 250 231 0 chr17 55547704 55547756 -33956797 - L2 LINE L2 0 3272 3209 1198 162 28 32 chr17 55547821 55547932 -33956621 + L1PB4 LINE L1 5938 6049 -107 1340 61 162 0 chr17 55547932 55548130 -33956423 - MER30 DNA MER1_type 0 230 1 1198 162 28 32 chr17 55548130 55548234 -33956319 + L1PB4 LINE L1 6049 6152 -4 7868 33 5 6 chr17 55548714 55550329 -33954224 - L1PA4 LINE L1 -3 6152 4542 243 298 79 35 chr17 55554578 55554692 -33949861 - MIR SINE MIR -58 204 86 266 364 0 0 chr17 55554708 55554796 -33949757 + Charlie7 DNA MER1_type 1 88 -2524 1031 85 0 0 chr17 55554816 55554945 -33949608 + AluSc SINE Alu 161 289 -20 2402 82 3 3 chr17 55555008 55555314 -33949239 - AluSq SINE Alu -7 306 1 1950 145 3 3 chr17 55555352 55555642 -33948911 - AluJb SINE Alu -13 299 10 1059 104 42 72 chr17 55555900 55556052 -33948501 + L1MA2 LINE L1 6063 6209 -95 2172 84 52 0 chr17 55556052 55556338 -33948215 - AluSx SINE Alu -11 301 1 1059 104 42 72 chr17 55556338 55556378 -33948175 + L1MA2 LINE L1 6209 6249 -55 994 134 28 17 chr17 55556424 55556585 -33947968 - MER4E LTR ERV1 -1 765 603 587 124 10 21 chr17 55556585 55556682 -33947871 + MER4A LTR ERV1 3 98 -566 1977 118 3 30 chr17 55556682 55557037 -33947516 + MER4A LTR ERV1 261 664 0 5689 179 102 93 chr17 55557040 55558200 -33946353 + MER4A-int LTR ERV1 1 1149 -5449 336 64 0 0 chr17 55558200 55558247 -33946306 + (TG)n Simple_repeat Simple_repeat 2 48 0 5689 179 102 93 chr17 55558247 55558443 -33946110 + MER4A-int LTR ERV1 1149 1342 -5256 2191 53 0 15 chr17 55558443 55558738 -33945815 + AluY SINE Alu 24 314 0 5689 179 102 93 chr17 55558738 55559457 -33945096 + MER4A-int LTR ERV1 1342 2097 -4501 28154 75 18 13 chr17 55559463 55565586 -33938967 + L1PA6 LINE L1 11 6150 -4 2645 72 3 21 chr17 55565586 55565973 -33938580 + MER4A-int LTR ERV1 1270 1649 -3366 1371 131 78 25 chr17 55565973 55566070 -33938483 - LTR8 LTR ERV1 -434 257 167 3317 76 32 5 chr17 55566070 55566110 -33938443 - MLT2A1 LTR ERVL 0 444 407 269 100 20 0 chr17 55566110 55566160 -33938393 + (TA)n Simple_repeat Simple_repeat 1 51 0 3317 76 32 5 chr17 55566160 55566551 -33938002 - MLT2A1 LTR ERVL -37 407 1 1371 131 78 25 chr17 55566551 55566697 -33937856 - LTR8 LTR ERV1 -524 167 1 4110 112 76 63 chr17 55566697 55567022 -33937531 + MER4A-int LTR ERV1 2737 3056 -3542 1944 168 3 0 chr17 55567022 55567325 -33937228 + AluSx SINE Alu 1 304 -8 4110 112 76 63 chr17 55567325 55567376 -33937177 + MER4A-int LTR ERV1 3056 3105 -3493 2080 142 7 0 chr17 55567376 55567671 -33936882 - AluSx SINE Alu -15 297 1 4110 112 76 63 chr17 55567671 55567762 -33936791 + MER4A-int LTR ERV1 3105 3193 -3405 2333 92 7 7 chr17 55567762 55568068 -33936485 + AluSq SINE Alu 1 306 -7 4110 112 76 63 chr17 55568068 55568266 -33936287 + MER4A-int LTR ERV1 3193 3387 -3211 2312 113 0 0 chr17 55568266 55568566 -33935987 - AluSx SINE Alu -12 300 1 4110 112 76 63 chr17 55568566 55568830 -33935723 + MER4A-int LTR ERV1 3387 3681 -2917 * 16250 109 46 32 chr17 55568829 55568957 -33935596 + MER4A-int LTR ERV1 3837 3962 -2636 1985 115 11 0 chr17 55568957 55569236 -33935317 - AluSc SINE Alu -11 298 17 16250 109 46 32 chr17 55569236 55569263 -33935290 + MER4A-int LTR ERV1 3962 3987 -2611 2310 98 0 0 chr17 55569263 55569550 -33935003 + AluSg SINE Alu 1 287 -23 16250 109 46 32 chr17 55569550 55569659 -33934894 + MER4A-int LTR ERV1 3987 4093 -2505 2124 144 3 6 chr17 55569659 55569971 -33934582 + AluSq SINE Alu 1 311 -2 16250 109 46 32 chr17 55569971 55572429 -33932124 + MER4A-int LTR ERV1 4093 6598 0 652 121 0 10 chr17 55572430 55572529 -33932024 + MER4A LTR ERV1 1 98 -566 1760 119 3 64 chr17 55572529 55572839 -33931714 + MER4A LTR ERV1 261 607 -57 2493 78 13 0 chr17 55572839 55573145 -33931408 - AluSp SINE Alu -3 310 1 1760 119 3 64 chr17 55573145 55573188 -33931365 + MER4A LTR ERV1 607 651 -13 526 160 17 50 chr17 55573183 55573302 -33931251 - MER4D LTR ERV1 -160 743 629 * 1662 142 65 4 chr17 55573307 55573568 -33930985 + AluJo SINE Alu 5 281 -31 2930 135 73 29 chr17 55573576 55574125 -33930428 - LTR10A LTR ERV1 -36 573 1 4567 100 6 8 chr17 55574200 55574841 -33929712 - MER4D LTR ERV1 -263 640 1 192 158 0 0 chr17 55575429 55575467 -33929086 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 325 329 7 14 chr17 55575570 55575713 -33928840 - L2 LINE L2 -146 3126 2985 1674 131 106 7 chr17 55575941 55576216 -33928337 + AluJb SINE Alu 1 302 -10 314 143 71 60 chr17 55576237 55576321 -33928232 - LTR37B LTR ERV1 -382 86 2 199 279 15 59 chr17 55576575 55576643 -33927910 - MIR SINE MIR -101 107 43 770 235 120 4 chr17 55577133 55577367 -33927186 + MIR SINE MIR 2 262 0 432 278 46 46 chr17 55577372 55577545 -33927008 - MIR SINE MIR -70 192 20 249 234 26 26 chr17 55578181 55578258 -33926295 + MIR SINE MIR 71 147 -115 233 239 14 28 chr17 55578450 55578521 -33926032 - L1ME LINE L1 -535 5586 5517 296 273 113 52 chr17 55578538 55578732 -33925821 - L1ME3A LINE L1 -2 6168 5963 2704 202 47 74 chr17 55578816 55579421 -33925132 - L1MC5 LINE L1 -431 7530 6953 1364 117 75 5 chr17 55579421 55579634 -33924919 - MER30 DNA MER1_type 0 230 3 2704 202 47 74 chr17 55579634 55579865 -33924688 - L1MC5 LINE L1 -1008 6953 6717 1976 180 43 63 chr17 55579866 55580254 -33924299 + MLT2A2 LTR ERVL 1 380 -174 2194 101 49 0 chr17 55580254 55580542 -33924011 - AluSx SINE Alu -10 302 1 1976 180 43 63 chr17 55580542 55580714 -33923839 + MLT2A2 LTR ERVL 380 554 0 262 246 58 14 chr17 55580727 55580796 -33923757 - L1MC5 LINE L1 -1254 6707 6636 658 301 68 41 chr17 55580826 55581314 -33923239 - HAL1b LINE L1 -775 573 73 264 59 0 0 chr17 55581345 55581379 -33923174 + (TC)n Simple_repeat Simple_repeat 1 34 0 625 153 0 27 chr17 55581384 55581495 -33923058 - FLAM_C SINE Alu -25 118 11 28935 70 8 22 chr17 55581522 55585435 -33919118 + L1P LINE L1 609 4466 -1680 2780 46 0 15 chr17 55585435 55585764 -33918789 + SVA Other Other 1063 1386 0 15164 49 2 4 chr17 55585765 55587610 -33916943 - L1P LINE L1 -4304 1842 1 381 272 129 42 chr17 55588329 55588546 -33916007 - MIR SINE MIR -14 248 13 948 235 20 0 chr17 55588556 55588760 -33915793 - LTR16A LTR ERVL -11 439 232 201 226 0 0 chr17 55588844 55588897 -33915656 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 2290 110 0 3 chr17 55589186 55589486 -33915067 - AluSg SINE Alu -11 299 1 1724 174 64 6 chr17 55589497 55589842 -33914711 - MLT1A1 LTR MaLR 0 365 1 1759 130 136 15 chr17 55590765 55591096 -33913457 + MLT1B LTR MaLR 14 384 -6 256 275 147 0 chr17 55591157 55591266 -33913287 - L2 LINE L2 -14 3258 3134 2412 211 29 22 chr17 55591587 55592137 -33912416 + MLT2B3 LTR ERVL 1 554 0 217 275 73 28 chr17 55592950 55592999 -33911554 - MIR SINE MIR -54 208 163 1985 118 21 11 chr17 55592999 55593169 -33911384 - AluSx SINE Alu 0 305 129 270 0 0 0 chr17 55593169 55593199 -33911354 + (TA)n Simple_repeat Simple_repeat 2 31 0 1985 118 21 11 chr17 55593199 55593330 -33911223 - AluSx SINE Alu -176 129 1 1936 158 0 10 chr17 55593332 55593642 -33910911 - AluJb SINE Alu -5 307 1 217 275 73 28 chr17 55593642 55593697 -33910856 - MIR SINE MIR -99 163 95 477 233 0 0 chr17 55593778 55593864 -33910689 + MER58B DNA MER1_type 1 86 -255 1113 180 10 5 chr17 55593864 55594058 -33910495 - AluJb SINE Alu -12 300 106 2021 152 0 0 chr17 55594097 55594394 -33910159 - AluJb SINE Alu -15 297 1 402 138 0 0 chr17 55594842 55594900 -33909653 - AluJb SINE Alu -203 99 42 450 132 0 0 chr17 55594902 55594999 -33909554 + AluJ/FRAM SINE Alu 218 314 0 1225 193 31 4 chr17 55595060 55595314 -33909239 + MER58B DNA MER1_type 79 339 -2 252 333 40 47 chr17 55596219 55596275 -33908278 + L2 LINE L2 3122 3177 -95 216 0 0 0 chr17 55596275 55596299 -33908254 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 2354 85 0 7 chr17 55596301 55596595 -33907958 - AluSq SINE Alu -21 292 1 252 333 40 47 chr17 55596595 55596685 -33907868 + L2 LINE L2 3178 3270 -2 189 94 0 0 chr17 55597663 55597695 -33906858 + (T)n Simple_repeat Simple_repeat 1 32 0 395 325 66 22 chr17 55597958 55598232 -33906321 + L2 LINE L2 2406 2691 -623 467 276 19 11 chr17 55598233 55598396 -33906157 - L1PB4 LINE L1 -1 6164 6003 1109 149 0 0 chr17 55598447 55598608 -33905945 - FRAM SINE Alu -16 160 1 2147 123 3 3 chr17 55598645 55598953 -33905600 - AluSx SINE Alu 0 312 5 192 339 85 8 chr17 55599069 55599187 -33905366 + L2 LINE L2 3169 3295 -18 2040 98 0 75 chr17 55599384 55599718 -33904835 + AluSx SINE Alu 1 311 0 356 301 161 14 chr17 55600462 55600605 -33903948 + MIR SINE MIR 27 190 -72 459 227 17 17 chr17 55600719 55600838 -33903715 + MIR SINE MIR 30 148 -114 325 288 137 20 chr17 55601620 55601766 -33902787 + MIR SINE MIR 28 190 -72 309 306 70 30 chr17 55602344 55602511 -33902042 + MIR SINE MIR 2 180 -28 349 219 219 17 chr17 55602573 55602692 -33901861 + MER103 DNA DNA 17 159 -7 280 329 0 0 chr17 55602740 55602816 -33901737 + MIR SINE MIR 5 80 -182 1315 255 145 22 chr17 55602817 55603325 -33901228 - MLT1F1 LTR MaLR 0 567 1 424 200 233 0 chr17 55603325 55603475 -33901078 + MIR SINE MIR 77 261 -1 233 250 0 0 chr17 55603480 55603536 -33901017 + L2 LINE L2 3255 3310 -3 281 313 31 0 chr17 55603585 55603681 -33900872 + MIR SINE MIR 158 256 -6 251 191 16 0 chr17 55603747 55603810 -33900743 + CT-rich Low_complexity Low_complexity 4 67 0 1104 158 13 66 chr17 55605010 55605238 -33899315 + MER20 DNA MER1_type 3 218 -1 461 188 18 27 chr17 55606099 55606211 -33898342 + MER103 DNA DNA 56 166 0 253 200 0 20 chr17 55606290 55606340 -33898213 + C-rich Low_complexity Low_complexity 2 50 0 298 304 7 51 chr17 55606440 55606578 -33897975 + L2 LINE L2 2920 3051 -221 2244 130 0 0 chr17 55606814 55607121 -33897432 + AluJo SINE Alu 3 309 -3 225 239 34 57 chr17 55607554 55607642 -33896911 - L2 LINE L2 -2 3270 3185 245 250 43 22 chr17 55608395 55608487 -33896066 - MIR SINE MIR -92 116 23 298 340 57 0 chr17 55608633 55608774 -33895779 + MIR SINE MIR 111 259 -3 283 273 127 13 chr17 55609307 55609457 -33895096 - MIR SINE MIR -14 248 82 275 305 86 74 chr17 55610126 55610305 -33894248 - MIR SINE MIR -63 145 3 198 103 0 0 chr17 55610934 55610963 -33893590 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2297 110 0 0 chr17 55611748 55612049 -33892504 - AluSx SINE Alu -11 301 1 981 152 5 21 chr17 55612058 55612249 -33892304 - L1MA7 LINE L1 -4 6287 6100 2365 104 0 0 chr17 55612249 55612547 -33892006 + AluSx SINE Alu 1 298 -14 3790 163 23 14 chr17 55612547 55613166 -33891387 - L1MA7 LINE L1 -357 5934 5301 1656 146 0 70 chr17 55613166 55613496 -33891057 + AluJb SINE Alu 1 307 -5 3790 163 23 14 chr17 55613496 55613778 -33890775 - L1MA7 LINE L1 -990 5301 5023 671 271 0 13 chr17 55614157 55614308 -33890245 + MIR SINE MIR 18 166 -96 474 214 64 40 chr17 55614715 55614856 -33889697 + LTR67 LTR ERVL 381 528 -29 1933 155 0 0 chr17 55614856 55615160 -33889393 - AluSg SINE Alu -1 309 6 474 214 64 40 chr17 55615160 55615191 -33889362 + LTR67 LTR ERVL 528 557 0 270 264 81 11 chr17 55615193 55615280 -33889273 + MIR SINE MIR 160 252 -10 272 244 56 11 chr17 55615345 55615435 -33889118 + MIR3 SINE MIR 109 202 -6 261 86 0 0 chr17 55615439 55615474 -33889079 - MLT1A2 LTR MaLR 0 374 340 2137 208 118 50 chr17 55615474 55615974 -33888579 - MER50 LTR ERV1 0 734 269 2172 97 7 0 chr17 55615974 55616272 -33888281 - AluSp SINE Alu -13 300 1 2137 208 118 50 chr17 55616272 55616349 -33888204 - MER50 LTR ERV1 -465 269 199 1910 149 0 7 chr17 55616349 55616657 -33887896 - AluSx SINE Alu -6 306 1 2137 208 118 50 chr17 55616657 55616757 -33887796 - MER50 LTR ERV1 -535 199 10 1718 169 40 56 chr17 55616741 55617114 -33887439 - MLT1A2 LTR MaLR -7 367 1 * 499 196 125 9 chr17 55617446 55617558 -33886995 + MIR SINE MIR 20 144 -64 293 296 50 45 chr17 55618193 55618227 -33886326 - MIR SINE MIR -60 202 170 1940 215 54 9 chr17 55618227 55618673 -33885880 - MLT1C LTR MaLR -1 466 1 293 296 50 45 chr17 55618673 55618823 -33885730 - MIR SINE MIR -92 170 22 292 292 0 14 chr17 55618906 55618978 -33885575 + MER5A DNA MER1_type 119 189 0 559 225 152 0 chr17 55619089 55619240 -33885313 - MER5A DNA MER1_type -7 182 9 331 326 234 7 chr17 55619285 55619426 -33885127 + MER5B DNA MER1_type 5 177 -1 2341 150 179 35 chr17 55619879 55620392 -33884161 - LTR18B LTR ERVL -27 587 1 1270 267 112 42 chr17 55620545 55621284 -33883269 + LTR1B LTR ERV1 36 826 0 398 252 8 71 chr17 55621363 55621490 -33883063 + MIR SINE MIR 113 231 -31 850 237 139 0 chr17 55621746 55621961 -33882592 + MIR SINE MIR 1 245 -17 404 338 102 0 chr17 55622021 55622178 -33882375 - MIR SINE MIR -70 192 20 7393 43 15 0 chr17 55622197 55623223 -33881330 - L1PA7 LINE L1 0 6154 5128 180 306 28 14 chr17 55623700 55623772 -33880781 + MIR3 SINE MIR 104 176 -32 535 288 60 16 chr17 55623973 55624157 -33880396 - MIR3 SINE MIR -7 201 10 186 188 0 141 chr17 55625388 55625452 -33879101 - L2 LINE L2 -1 3271 3217 * 701 276 83 14 chr17 55625421 55625638 -33878915 - MIR SINE MIR -19 243 12 294 293 7 41 chr17 55625668 55625782 -33878771 + HAL1b LINE L1 1200 1309 -39 2295 63 3 7 chr17 55625782 55626082 -33878471 - AluSc SINE Alu -10 299 1 294 293 7 41 chr17 55626082 55626114 -33878439 + HAL1b LINE L1 1309 1341 -7 1305 254 84 28 chr17 55627027 55627453 -33877100 - MLT1J2 LTR MaLR 0 450 1 355 293 33 13 chr17 55627477 55627627 -33876926 + L1ME LINE L1 5642 5794 -327 370 282 120 0 chr17 55627965 55628082 -33876471 + L2 LINE L2 3137 3267 -5 457 126 53 21 chr17 55628699 55628794 -33875759 + MER53 DNA DNA 7 104 -85 2005 142 0 3 chr17 55629943 55630252 -33874301 + AluSx SINE Alu 1 308 -4 258 116 0 0 chr17 55630300 55630343 -33874210 + (CA)n Simple_repeat Simple_repeat 2 44 0 288 213 40 13 chr17 55631108 55631183 -33873370 + MIR SINE MIR 108 184 -78 21 0 0 0 chr17 55631668 55631689 -33872864 + AT_rich Low_complexity Low_complexity 1 21 0 1902 148 0 10 chr17 55631689 55631980 -33872573 - AluJo SINE Alu -24 288 1 750 216 186 52 chr17 55632198 55632583 -33871970 - MLT1K LTR MaLR -24 564 100 302 250 83 46 chr17 55632711 55632819 -33871734 + L2 LINE L2 3161 3272 0 1228 179 60 0 chr17 55632926 55633160 -33871393 - L1MB5 LINE L1 -6 6168 5921 280 91 0 0 chr17 55633183 55633227 -33871326 - AluY SINE Alu 0 299 256 1302 89 0 0 chr17 55633228 55633396 -33871157 - AluY SINE Alu -143 168 1 1563 113 184 0 chr17 55633420 55633676 -33870877 + AluSx SINE Alu 1 303 -9 358 291 137 41 chr17 55634918 55635090 -33869463 + MIR SINE MIR 11 192 -63 441 285 8 8 chr17 55635226 55635349 -33869204 + MIR3 SINE MIR 60 182 -26 210 327 136 38 chr17 55636069 55636270 -33868283 + MIR SINE MIR 7 212 -50 187 279 29 115 chr17 55636438 55636542 -33868011 - MIR SINE MIR -164 98 4 188 244 0 22 chr17 55636582 55636627 -33867926 - L2 LINE L2 -34 3279 3236 2040 105 18 0 chr17 55637622 55637908 -33866645 - AluSx SINE Alu -21 291 1 300 329 26 90 chr17 55638273 55638507 -33866046 - L2 LINE L2 -38 3234 3016 2287 91 0 0 chr17 55640121 55640428 -33864125 - AluSq SINE Alu -6 307 1 225 313 170 0 chr17 55640730 55640842 -33863711 + L2 LINE L2 3136 3266 -6 1122 188 30 0 chr17 55640870 55641072 -33863481 - MER3 DNA MER1_type -1 208 1 1868 255 123 41 chr17 55641326 55642231 -33862322 - HAL1 LINE L1 -38 2469 1491 271 196 11 11 chr17 55642246 55642302 -33862251 + GA-rich Low_complexity Low_complexity 1 59 -33 2088 203 70 57 chr17 55642302 55642845 -33861708 - MLT2B3 LTR ERVL 0 554 5 271 196 11 11 chr17 55642845 55642880 -33861673 + GA-rich Low_complexity Low_complexity 58 92 0 641 309 51 6 chr17 55642882 55643057 -33861496 - MLT1F LTR MaLR -359 183 1 339 310 94 33 chr17 55643057 55643270 -33861283 - HAL1 LINE L1 -2129 378 153 1603 157 4 7 chr17 55643701 55643975 -33860578 + AluJb SINE Alu 1 273 -39 453 240 55 21 chr17 55644184 55644341 -33860212 - MIR3 SINE MIR -41 167 6 243 259 0 0 chr17 55644547 55644605 -33859948 + MER103 DNA DNA 57 114 -52 1729 174 103 6 chr17 55644639 55644978 -33859575 - MLT1B LTR MaLR -17 373 2 228 197 33 16 chr17 55645632 55645693 -33858860 + MER88 LTR ERVL 79 140 -324 733 266 65 13 chr17 55645776 55645995 -33858558 - MER74B LTR ERVL -301 321 88 1907 158 3 0 chr17 55645995 55646272 -33858281 + AluSx SINE Alu 1 281 -31 216 0 0 0 chr17 55646272 55646296 -33858257 + (CA)n Simple_repeat Simple_repeat 2 25 0 1907 158 3 0 chr17 55646296 55646328 -33858225 + AluSx SINE Alu 281 311 -1 2317 208 50 7 chr17 55646335 55646895 -33857658 - MLT2F LTR ERVL -9 654 1 296 64 21 0 chr17 55646942 55646989 -33857564 + (TG)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr17 55647203 55647225 -33857328 + AT_rich Low_complexity Low_complexity 1 22 0 1146 183 87 4 chr17 55647792 55648021 -33856532 - MLT2F LTR ERVL -12 651 404 1689 128 0 0 chr17 55648481 55648724 -33855829 - AluSg SINE Alu -14 296 54 1638 157 57 0 chr17 55649581 55649861 -33854692 + AluJb SINE Alu 3 298 -14 2025 102 3 68 chr17 55651475 55651800 -33852753 + AluSx SINE Alu 1 304 -8 567 267 92 29 chr17 55652593 55652648 -33851905 - MIR SINE MIR -33 229 179 2409 184 50 12 chr17 55652648 55653132 -33851421 + MLT1D LTR MaLR 3 504 -1 567 267 92 29 chr17 55653132 55653282 -33851271 - MIR SINE MIR -83 179 11 519 309 118 18 chr17 55653913 55654133 -33850420 - MIR SINE MIR 0 262 21 2203 117 3 0 chr17 55654156 55654465 -33850088 - AluSx SINE Alu -2 310 1 208 302 210 60 chr17 55654495 55654743 -33849810 + L2 LINE L2 2987 3271 -1 425 219 47 39 chr17 55655138 55655266 -33849287 + L2 LINE L2 3175 3303 -10 915 279 12 21 chr17 55655631 55655871 -33848682 + MIR SINE MIR 25 262 0 272 394 11 11 chr17 55656959 55657139 -33847414 - L3b LINE CR1 -115 1468 1289 955 180 0 17 chr17 55657262 55657440 -33847113 - FRAM SINE Alu -1 175 1 198 71 0 0 chr17 55657785 55657813 -33846740 + (TAA)n Simple_repeat Simple_repeat 2 29 0 551 288 42 72 chr17 55657825 55658066 -33846487 - MIR SINE MIR -19 243 9 360 0 0 0 chr17 55658134 55658174 -33846379 + (TG)n Simple_repeat Simple_repeat 2 41 0 313 213 0 38 chr17 55658641 55658721 -33845832 + L1ME4a LINE L1 5747 5823 -298 2167 129 0 0 chr17 55658758 55659069 -33845484 + AluSx SINE Alu 1 311 -1 294 29 0 0 chr17 55659151 55659186 -33845367 + (TG)n Simple_repeat Simple_repeat 2 36 0 202 77 0 0 chr17 55659186 55659212 -33845341 + (TA)n Simple_repeat Simple_repeat 2 27 0 410 249 59 83 chr17 55659213 55659382 -33845171 + L1ME4a LINE L1 5935 6099 -22 267 358 0 0 chr17 55659449 55659544 -33845009 - L3b LINE CR1 -202 1381 1287 36 0 0 0 chr17 55660166 55660202 -33844351 + AT_rich Low_complexity Low_complexity 1 36 0 2343 112 49 6 chr17 55660214 55660563 -33843990 + THE1B LTR MaLR 1 364 0 392 275 138 0 chr17 55660571 55660709 -33843844 + MIR SINE MIR 100 256 -6 1114 203 68 0 chr17 55660894 55661101 -33843452 + MER58A DNA MER1_type 4 224 0 327 348 7 7 chr17 55661524 55661665 -33842888 + L2 LINE L2 2487 2627 -687 184 306 111 0 chr17 55661713 55661785 -33842768 - L2 LINE L2 -46 3226 3147 * 358 384 17 17 chr17 55661780 55662017 -33842536 + L2 LINE L2 2619 2855 -459 1185 214 95 83 chr17 55662072 55662326 -33842227 - MLT1J2 LTR MaLR 0 450 200 1593 186 0 0 chr17 55662326 55662601 -33841952 + AluSx SINE Alu 1 275 -37 312 0 62 0 chr17 55662605 55662653 -33841900 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1185 214 95 83 chr17 55662653 55662824 -33841729 - MLT1J2 LTR MaLR -252 198 15 2191 118 3 3 chr17 55662845 55663151 -33841402 - AluSx SINE Alu -5 307 2 224 353 0 0 chr17 55663262 55663330 -33841223 + L2 LINE L2 2988 3055 -217 21 0 0 0 chr17 55663427 55663448 -33841105 + AT_rich Low_complexity Low_complexity 1 21 0 2404 82 3 0 chr17 55663860 55664164 -33840389 + AluY SINE Alu 1 305 -6 210 37 0 0 chr17 55664165 55664192 -33840361 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 399 202 10 10 chr17 55664216 55664315 -33840238 - MIR SINE MIR -47 215 117 1910 162 0 10 chr17 55664650 55664959 -33839594 - AluJb SINE Alu -6 306 1 440 241 0 9 chr17 55665415 55665527 -33839026 + MIR SINE MIR 151 261 -1 1942 200 48 48 chr17 55665839 55666170 -33838383 + MLT1D LTR MaLR 1 334 -171 186 43 0 0 chr17 55666170 55666193 -33838360 + (CAAGG)n Simple_repeat Simple_repeat 3 25 0 1942 200 48 48 chr17 55666193 55666366 -33838187 + MLT1D LTR MaLR 333 505 0 546 274 13 0 chr17 55666511 55666668 -33837885 - MER103 DNA DNA -1 165 7 23 33 0 0 chr17 55666760 55666790 -33837763 + AT_rich Low_complexity Low_complexity 1 30 0 214 353 43 65 chr17 55667401 55667865 -33836688 - L2 LINE L2 -1039 2275 1822 27 0 0 26 chr17 55667921 55667936 -33836617 + AT_rich Low_complexity Low_complexity 1 15 -22 1737 181 3 10 chr17 55667936 55668228 -33836325 - AluJb SINE Alu -22 290 1 27 0 0 26 chr17 55668228 55668250 -33836303 + AT_rich Low_complexity Low_complexity 15 37 0 1329 290 67 32 chr17 55668475 55669560 -33834993 + L1MEd LINE L1 981 2142 -4579 829 0 20 0 chr17 55669834 55669935 -33834618 + (TA)n Simple_repeat Simple_repeat 2 104 0 1972 139 10 3 chr17 55669935 55670230 -33834323 - AluSx SINE Alu -15 297 1 257 250 66 40 chr17 55670489 55670641 -33833912 + L1MEd LINE L1 2448 2603 -3937 2251 120 0 3 chr17 55670959 55671259 -33833294 - AluSx SINE Alu -12 300 2 194 259 74 25 chr17 55672533 55672614 -33831939 - L2 LINE L2 -38 3234 3150 421 319 61 41 chr17 55672687 55673008 -33831545 - L2 LINE L2 -193 3079 2743 428 275 111 12 chr17 55673008 55673179 -33831374 + MER5A DNA MER1_type 2 189 0 421 319 61 41 chr17 55673179 55673372 -33831181 - L2 LINE L2 -529 2743 2555 342 67 0 0 chr17 55673744 55673789 -33830764 + (CA)n Simple_repeat Simple_repeat 2 46 0 2635 85 28 0 chr17 55675002 55675356 -33829197 + THE1B LTR MaLR 1 364 0 433 290 71 30 chr17 55675428 55675597 -33828956 - MIR SINE MIR -70 192 17 817 273 120 43 chr17 55676787 55677204 -33827349 + MLT1K LTR MaLR 26 474 -114 * 1091 266 119 44 chr17 55677198 55677676 -33826877 - LTR33 LTR ERVL -7 514 1 316 156 78 67 chr17 55677690 55677780 -33826773 + MLT1K LTR MaLR 488 578 -10 342 285 114 0 chr17 55677822 55677945 -33826608 + L2 LINE L2 3168 3304 -9 236 250 40 13 chr17 55678416 55678492 -33826061 - MLT1K LTR MaLR -324 264 187 2313 193 23 34 chr17 55678797 55679325 -33825228 + Charlie1b DNA MER1_type 1 522 -1 382 309 42 30 chr17 55679557 55679725 -33824828 + MIR SINE MIR 85 254 -8 2379 53 3 3 chr17 55679833 55680147 -33824406 - AluY SINE Alu 0 314 1 225 0 0 0 chr17 55680328 55680353 -33824200 + (T)n Simple_repeat Simple_repeat 1 25 0 200 220 20 20 chr17 55680626 55680676 -33823877 + CT-rich Low_complexity Low_complexity 2 51 0 515 280 128 5 chr17 55680738 55680956 -33823597 + MIR SINE MIR 12 256 -6 28 29 0 0 chr17 55681081 55681116 -33823437 + AT_rich Low_complexity Low_complexity 1 35 0 1977 169 87 58 chr17 55681266 55681728 -33822825 + MLT1D LTR MaLR 1 475 -30 1555 122 0 0 chr17 55681729 55681934 -33822619 + AluSg/x SINE Alu 72 276 -36 221 0 0 33 chr17 55681939 55681969 -33822584 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 193 224 24 71 chr17 55682111 55682196 -33822357 + MIR3 SINE MIR 124 204 -4 258 313 143 18 chr17 55682270 55682382 -33822171 - L2 LINE L2 -5 3308 3183 916 240 80 9 chr17 55682868 55683093 -33821460 + MIR SINE MIR 21 261 -1 275 308 66 0 chr17 55683430 55683521 -33821032 + MIR SINE MIR 63 159 -103 1061 183 50 18 chr17 55683555 55683784 -33820769 - MLT1F1 LTR MaLR 0 583 348 * 2096 154 40 16 chr17 55683774 55684145 -33820408 - MLT1B LTR MaLR -7 383 4 626 229 71 104 chr17 55684147 55684427 -33820126 - MLT1F1 LTR MaLR -271 271 1 405 280 136 8 chr17 55684430 55684562 -33819991 - L2 LINE L2 0 3272 3124 4154 89 34 2 chr17 55684562 55685122 -33819431 + LTR19B LTR ERV1 1 578 -2 249 180 16 33 chr17 55685597 55685658 -33818895 - L1ME4a LINE L1 -3 6118 6059 1024 209 40 64 chr17 55686353 55686666 -33817887 - L1ME4a LINE L1 -517 5647 5353 688 295 87 62 chr17 55686666 55686787 -33817766 - L1M4 LINE L1 -3099 3283 3166 1634 199 3 22 chr17 55686787 55687103 -33817450 - AluJo SINE Alu -1 311 2 688 295 87 62 chr17 55687103 55687349 -33817204 - L1M4 LINE L1 -3216 3166 2928 2301 79 10 20 chr17 55687349 55687653 -33816900 + AluY SINE Alu 1 301 -10 688 295 87 62 chr17 55687653 55688317 -33816236 - L1M4 LINE L1 -3454 2928 2222 1500 205 149 35 chr17 55688834 55689316 -33815237 - LTR10A LTR ERV1 -60 549 13 4696 93 45 12 chr17 55689397 55690065 -33814488 + LTR8 LTR ERV1 1 690 -1 1007 189 84 5 chr17 55690943 55691232 -33813321 - L1MD3 LINE L1 -3 7992 7474 2111 104 6 44 chr17 55691376 55691694 -33812859 - AluSx SINE Alu -6 306 1 852 110 0 15 chr17 55691783 55691919 -33812634 - L1PB1 LINE L1 -3 6148 6015 300 279 86 64 chr17 55692697 55692837 -33811716 + MIR3 SINE MIR 59 201 -7 306 239 92 28 chr17 55693245 55693354 -33811199 + LTR67 LTR ERVL 422 537 -20 242 281 85 0 chr17 55693486 55693568 -33810985 + MIR SINE MIR 63 151 -111 569 221 50 7 chr17 55693785 55693925 -33810628 - MIR SINE MIR -30 232 87 320 329 114 7 chr17 55694685 55694834 -33809719 - MIR SINE MIR -69 193 29 676 232 98 0 chr17 55695137 55695301 -33809252 + MER20 DNA MER1_type 34 213 -6 217 308 34 17 chr17 55695314 55695431 -33809122 - MIR SINE MIR -57 151 33 2650 137 44 0 chr17 55695432 55695842 -33808711 - MSTC LTR MaLR 0 428 1 5297 136 13 6 chr17 55698649 55699853 -33804700 + L1PA14 LINE L1 4815 6028 -133 285 162 2 0 chr17 55699862 55699912 -33804641 - L1PA13 LINE L1 -79 6084 6034 1855 126 7 0 chr17 55699914 55700191 -33804362 - Tigger1 DNA MER2_type -478 1940 1662 760 133 23 8 chr17 55700201 55700329 -33804224 + L1PA13 LINE L1 6033 6162 -1 2613 151 16 76 chr17 55700470 55700955 -33803598 - LTR32 LTR ERVL -2 469 14 31508 110 19 59 chr17 55701191 55703831 -33800722 + L1PA7 LINE L1 10 2755 -3399 299 44 22 0 chr17 55703831 55703876 -33800677 + (CAA)n Simple_repeat Simple_repeat 1 46 0 31508 110 19 59 chr17 55703876 55705187 -33799366 + L1PA7 LINE L1 2755 4117 -2037 192 40 0 0 chr17 55705187 55705212 -33799341 + (CAA)n Simple_repeat Simple_repeat 3 27 0 31508 110 19 59 chr17 55705212 55707674 -33796879 + L1PA7 LINE L1 4117 6154 0 919 264 44 80 chr17 55708248 55708517 -33796036 - L1ME4a LINE L1 -60 6061 5821 1671 131 67 39 chr17 55708517 55708799 -33795754 - AluJo SINE Alu -22 290 1 919 264 44 80 chr17 55708799 55709079 -33795474 - L1ME4a LINE L1 -300 5821 5532 914 244 36 13 chr17 55709232 55709457 -33795096 - MIR SINE MIR -27 235 6 466 347 33 38 chr17 55709594 55709960 -33794593 - L2 LINE L2 -842 2472 2109 589 246 7 29 chr17 55709960 55710086 -33794467 - MER5B DNA MER1_type -1 177 53 312 27 0 0 chr17 55710086 55710123 -33794430 + (TG)n Simple_repeat Simple_repeat 1 37 0 589 246 7 29 chr17 55710123 55710134 -33794419 - MER5B DNA MER1_type -125 53 43 190 274 20 0 chr17 55710147 55710198 -33794355 + MER5B DNA MER1_type 115 166 -12 702 273 51 31 chr17 55710314 55710570 -33793983 - MIR SINE MIR 0 262 2 1679 159 25 4 chr17 55711027 55711303 -33793250 - AluJb SINE Alu -30 282 1 21 57 0 0 chr17 55712099 55712134 -33792419 + AT_rich Low_complexity Low_complexity 1 35 0 1087 168 48 16 chr17 55712182 55712383 -33792170 - MLT1A1 LTR MaLR -9 615 156 2001 119 3 23 chr17 55712399 55712733 -33791820 + AluSx SINE Alu 1 312 0 1113 165 25 15 chr17 55712759 55712959 -33791594 + MLT1A2 LTR MaLR 173 374 0 218 167 0 0 chr17 55713042 55713078 -33791475 + GA-rich Low_complexity Low_complexity 1 36 0 2391 83 0 32 chr17 55713353 55713667 -33790886 + AluSg1 SINE Alu 1 309 0 632 318 119 13 chr17 55714162 55714716 -33789837 - L1M4 LINE L1 -1604 4542 3930 270 209 220 22 chr17 55714716 55714807 -33789746 + L2 LINE L2 3205 3313 0 263 376 0 0 chr17 55715017 55715102 -33789451 - L2 LINE L2 0 3272 3188 283 316 11 11 chr17 55715147 55715242 -33789311 - MIR3 SINE MIR -26 182 88 947 208 169 44 chr17 55716090 55716711 -33787842 + LTR50 LTR ERVL 1 795 0 805 187 60 7 chr17 55717072 55717222 -33787331 + FRAM SINE Alu 1 158 -8 352 179 36 24 chr17 55718411 55718495 -33786058 + MER5B DNA MER1_type 2 86 -92 2049 159 9 51 chr17 55718531 55718633 -33785920 + MLT1B LTR MaLR 4 109 -265 2609 62 0 0 chr17 55718633 55718938 -33785615 + AluY SINE Alu 1 305 -6 2049 159 9 51 chr17 55718938 55719019 -33785534 + MLT1B LTR MaLR 109 192 -182 2140 132 0 0 chr17 55719019 55719315 -33785238 + AluSx SINE Alu 1 296 -16 2049 159 9 51 chr17 55719315 55719532 -33785021 + MLT1B LTR MaLR 192 374 0 2522 141 13 5 chr17 55719533 55719915 -33784638 - LTR32 LTR ERVL 0 471 87 230 171 0 0 chr17 55719964 55719999 -33784554 - MER5B DNA MER1_type -134 44 10 240 315 86 31 chr17 55720171 55720333 -33784220 + L2 LINE L2 2846 3016 -256 282 338 97 14 chr17 55720482 55720627 -33783926 + MIR3 SINE MIR 36 192 -16 253 302 0 0 chr17 55720677 55720740 -33783813 + L2 LINE L2 3249 3311 -2 283 233 0 0 chr17 55720848 55720908 -33783645 - MIR3 SINE MIR -29 179 120 1090 224 128 36 chr17 55721489 55721572 -33782981 - L1ME2 LINE L1 -9 6155 6081 2052 148 3 3 chr17 55721572 55721875 -33782678 + AluJb SINE Alu 1 303 -9 1090 224 128 36 chr17 55721875 55722149 -33782404 - L1ME2 LINE L1 -83 6081 5765 23 0 0 0 chr17 55722159 55722182 -33782371 + AT_rich Low_complexity Low_complexity 1 23 0 2605 159 17 37 chr17 55722185 55722668 -33781885 + MER70B LTR ERVL 1 473 -105 2257 105 0 0 chr17 55722741 55723037 -33781516 - AluSc SINE Alu 0 309 14 4074 139 34 2 chr17 55723120 55723210 -33781343 + L1PA16 LINE L1 5341 5427 -739 2451 68 0 3 chr17 55723210 55723519 -33781034 + AluY SINE Alu 1 308 -3 4074 139 34 2 chr17 55723519 55724194 -33780359 + L1PA16 LINE L1 5427 6157 -9 1568 184 48 4 chr17 55724278 55724572 -33779981 + AluJb SINE Alu 1 306 0 815 97 16 16 chr17 55725021 55725145 -33779408 + FRAM SINE Alu 34 157 -19 426 214 96 38 chr17 55725274 55725411 -33779142 + MIR3 SINE MIR 43 184 -24 276 333 10 10 chr17 55725753 55725849 -33778704 + L2 LINE L2 3172 3267 -5 635 202 29 29 chr17 55726521 55726552 -33778001 - L1MB2 LINE L1 -7 6164 6135 1878 144 7 10 chr17 55726552 55726851 -33777702 + AluJo SINE Alu 5 302 -10 635 202 29 29 chr17 55726851 55726971 -33777582 - L1MB2 LINE L1 -36 6135 6016 180 229 29 0 chr17 55727693 55727728 -33776825 + MIR SINE MIR 112 147 -61 1062 151 0 0 chr17 55727735 55727894 -33776659 - AluJb SINE Alu -9 303 145 1829 173 92 3 chr17 55727965 55728323 -33776230 - MER93a LTR ERV1 -8 394 5 1964 155 27 59 chr17 55728707 55728800 -33775753 + LTR37A LTR ERV1 2 96 -330 2402 192 63 7 chr17 55728800 55729242 -33775311 + MLT1C LTR MaLR 1 467 0 1964 155 27 59 chr17 55729242 55729587 -33774966 + LTR37A LTR ERV1 96 426 0 28 29 0 0 chr17 55729618 55729653 -33774900 + AT_rich Low_complexity Low_complexity 1 35 0 322 335 146 21 chr17 55729732 55729965 -33774588 + L3 LINE CR1 1234 1495 -82 2207 100 13 7 chr17 55730925 55731235 -33773318 + AluSx SINE Alu 1 312 0 267 217 0 0 chr17 55732445 55732491 -33772062 + MIR SINE MIR 32 77 -131 594 279 41 0 chr17 55732516 55732688 -33771865 - MER117 DNA MER1_type -12 185 7 471 188 62 27 chr17 55734083 55734195 -33770358 - MER5B DNA MER1_type 0 178 63 251 28 28 0 chr17 55734195 55734231 -33770322 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 800 159 8 0 chr17 55734394 55734520 -33770033 + FLAM_C SINE Alu 2 128 -5 26 30 0 0 chr17 55734520 55734553 -33770000 + AT_rich Low_complexity Low_complexity 1 33 0 519 194 176 18 chr17 55734830 55734995 -33769558 - L1ME3 LINE L1 -4 6158 5968 * 3586 225 36 51 chr17 55734990 55735625 -33768928 - L1MDa LINE L1 -4729 1811 1168 491 172 247 0 chr17 55735625 55735718 -33768835 - FLAM_C SINE Alu -16 117 2 3586 225 36 51 chr17 55735718 55736632 -33767921 - L1MDa LINE L1 -5372 1168 53 703 224 38 147 chr17 55736648 55737027 -33767526 - L1MCa LINE L1 -4750 2372 1953 15046 27 0 0 chr17 55737027 55739454 -33765099 - L1PA2 LINE L1 -8 6147 3721 703 224 38 147 chr17 55739454 55739701 -33764852 - L1MCa LINE L1 -5169 1953 1873 2125 131 3 16 chr17 55739701 55740013 -33764540 - AluSx SINE Alu -2 310 3 703 224 38 147 chr17 55740013 55740290 -33764263 - L1MCa LINE L1 -5249 1873 1567 357 318 14 27 chr17 55740285 55740433 -33764120 - L1MCa LINE L1 -5116 1307 1162 * 417 167 0 0 chr17 55740517 55740577 -33763976 - Tigger1 DNA MER2_type -2 2416 2357 403 241 147 26 chr17 55741144 55741260 -33763293 + L2 LINE L2 3139 3268 -4 196 29 29 29 chr17 55741932 55741966 -33762587 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 381 161 0 0 chr17 55741966 55742044 -33762509 - L1PA16 LINE L1 -16 6140 6063 589 229 33 44 chr17 55742048 55742231 -33762322 + MER97c DNA MER1_type? 906 1086 -4 1318 91 74 128 chr17 55743850 55744146 -33760407 + L1MA7 LINE L1 6010 6289 -2 1836 151 0 23 chr17 55744515 55744814 -33759739 + AluJo SINE Alu 1 292 -20 2053 154 30 46 chr17 55745285 55745445 -33759108 + MLT1A1 LTR MaLR 1 162 -203 2089 121 3 20 chr17 55745445 55745751 -33758802 + AluSx SINE Alu 1 301 -11 2053 154 30 46 chr17 55745751 55745959 -33758594 + MLT1A1 LTR MaLR 162 363 -2 219 188 0 0 chr17 55746428 55746476 -33758077 + (TG)n Simple_repeat Simple_repeat 2 49 0 846 230 201 14 chr17 55746851 55747250 -33757303 - L2 LINE L2 -115 3198 2723 1030 256 147 48 chr17 55747630 55748134 -33756419 - LTR67 LTR ERVL 0 557 4 701 271 123 39 chr17 55748327 55748840 -33755713 - HAL1 LINE L1 0 2507 1952 3544 138 23 48 chr17 55748855 55749270 -33755283 - LTR26 LTR ERV1 0 603 208 2256 46 0 8 chr17 55749270 55749532 -33755021 - L1PA7 LINE L1 -3 6151 5892 3544 138 23 48 chr17 55749532 55749734 -33754819 - LTR26 LTR ERV1 -395 208 2 1916 233 99 41 chr17 55749779 55750380 -33754173 - HAL1 LINE L1 -591 1916 1264 1548 191 10 14 chr17 55750380 55750674 -33753879 - AluJo SINE Alu -9 303 11 1916 233 99 41 chr17 55750674 55750799 -33753754 - HAL1 LINE L1 -1243 1264 1148 677 288 122 39 chr17 55750830 55751372 -33753181 - HAL1 LINE L1 -1434 1073 487 334 299 48 72 chr17 55751471 55751638 -33752915 - HAL1 LINE L1 -2190 317 155 326 252 122 49 chr17 55751820 55751943 -33752610 + MER94 DNA DNA 2 133 -1 24 32 0 0 chr17 55751986 55752017 -33752536 + AT_rich Low_complexity Low_complexity 1 31 0 187 229 21 21 chr17 55752592 55752640 -33751913 - L2 LINE L2 -4 3309 3262 583 271 208 25 chr17 55753589 55753873 -33750680 - MLT1J2 LTR MaLR 0 450 115 227 209 0 0 chr17 55753870 55753913 -33750640 - MLT1J1 LTR MaLR -401 45 3 * 471 276 24 0 chr17 55755477 55755604 -33748949 + MIR SINE MIR 76 205 -57 466 247 0 0 chr17 55755616 55755713 -33748840 + L1MEd LINE L1 6 102 -6017 21 0 0 0 chr17 55756106 55756127 -33748426 + AT_rich Low_complexity Low_complexity 1 21 0 2673 136 49 49 chr17 55756131 55756254 -33748299 - L1PB4 LINE L1 -14 6142 6020 1943 127 0 71 chr17 55756254 55756576 -33747977 - AluJb SINE Alu -13 299 1 2673 136 49 49 chr17 55756576 55756946 -33747607 - L1PB4 LINE L1 -135 6021 5649 1186 94 0 0 chr17 55757767 55757926 -33746627 - L1P5 LINE L1 -471 5685 5527 * 1474 309 40 43 chr17 55757925 55758695 -33745858 + L1MEd LINE L1 245 1012 -5107 2981 153 43 0 chr17 55758834 55759325 -33745228 - L1MC1 LINE L1 -6 6327 5816 775 100 0 18 chr17 55759325 55759432 -33745121 - L1PA8 LINE L1 -2 6170 6063 317 198 167 42 chr17 55760516 55760612 -33743941 - MIR SINE MIR -61 147 40 379 296 57 49 chr17 55760748 55760839 -33743714 + MLT1J LTR MaLR 22 111 -400 216 0 0 0 chr17 55760839 55760863 -33743690 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 379 296 57 49 chr17 55760863 55761018 -33743535 + MLT1J LTR MaLR 111 270 -241 1974 116 0 0 chr17 55763144 55763402 -33741151 + AluSx SINE Alu 36 293 -19 366 321 102 23 chr17 55763688 55763903 -33740650 + L1M4 LINE L1 3264 3495 -2651 1431 182 48 3 chr17 55764339 55764589 -33739964 + AluJo SINE Alu 16 282 -30 989 8 8 8 chr17 55764589 55764711 -33739842 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 217 310 52 0 chr17 55765137 55765195 -33739358 + MIR SINE MIR 87 147 -115 1168 146 5 10 chr17 55765974 55766173 -33738380 - L1PB1 LINE L1 -3 6148 5951 897 260 61 87 chr17 55766279 55766737 -33737816 - LTR16B LTR ERVL 0 464 19 3759 129 68 3 chr17 55766763 55767350 -33737203 + MER51A LTR ERV1 1 625 -9 370 280 65 16 chr17 55767373 55767559 -33736994 + MIR SINE MIR 68 262 0 21 57 0 0 chr17 55767816 55767851 -33736702 + AT_rich Low_complexity Low_complexity 1 35 0 5312 64 6 1 chr17 55767853 55768524 -33736029 - L1PA7 LINE L1 -4 6150 5477 1328 253 92 7 chr17 55768531 55768934 -33735619 - L1ME1 LINE L1 -6 6160 5724 184 108 0 81 chr17 55768936 55768973 -33735580 + L2 LINE L2 3261 3294 -19 1794 168 60 37 chr17 55770339 55770719 -33733834 + MLT1B LTR MaLR 1 389 -1 3341 81 5 5 chr17 55770806 55771250 -33733303 + L1PA11 LINE L1 5731 6174 0 260 184 28 46 chr17 55771416 55771525 -33733028 + (CAAA)n Simple_repeat Simple_repeat 2 108 0 677 237 61 38 chr17 55771974 55772417 -33732136 + L1ME4a LINE L1 5550 6120 -1 2250 129 3 0 chr17 55772452 55772762 -33731791 + AluSx SINE Alu 1 311 -1 767 208 57 0 chr17 55773107 55773266 -33731287 - MER5B DNA MER1_type -4 174 7 2360 97 3 3 chr17 55773380 55773689 -33730864 - AluSp SINE Alu -3 310 2 3688 179 62 44 chr17 55774130 55774673 -33729880 - MER21B LTR ERV1 -2 861 297 1668 77 0 5 chr17 55774673 55774895 -33729658 - L1PA6 LINE L1 0 6154 5934 3688 179 62 44 chr17 55774895 55775154 -33729399 - MER21B LTR ERV1 -566 297 44 533 156 0 0 chr17 55775155 55775232 -33729321 - MER21B LTR ERV1 -771 92 16 395 328 15 50 chr17 55776413 55776614 -33727939 - L2 LINE L2 -9 3263 3070 473 313 23 19 chr17 55776630 55776844 -33727709 - L2 LINE L2 -1395 1919 1705 457 296 23 23 chr17 55776854 55776986 -33727567 - L2 LINE L2 -5 3267 3136 9092 169 90 62 chr17 55777095 55777513 -33727040 - L1MC3 LINE L1 -164 7621 7216 277 238 10 37 chr17 55777513 55777610 -33726943 - MLT1F1 LTR MaLR -442 125 45 9092 169 90 62 chr17 55777610 55778420 -33726133 - L1MC3 LINE L1 -569 7216 6430 1529 198 63 29 chr17 55778420 55778803 -33725750 - MSTD LTR MaLR 0 396 1 9092 169 90 62 chr17 55778803 55779358 -33725195 - L1MC3 LINE L1 -1355 6430 5672 2039 176 83 45 chr17 55779358 55779852 -33724701 - MER67D LTR ERV1 0 514 2 9092 169 90 62 chr17 55779852 55780090 -33724463 - L1MC3 LINE L1 -2113 5672 5442 181 345 150 9 chr17 55780286 55780506 -33724047 - L2 LINE L2 -2588 726 476 198 326 94 43 chr17 55780541 55780679 -33723874 - L2 LINE L2 -2923 391 247 207 152 0 0 chr17 55780679 55780725 -33723828 + T-rich Low_complexity Low_complexity 1 46 0 1593 235 79 30 chr17 55781133 55781562 -33722991 + LTR16B LTR ERVL 15 464 0 530 260 144 0 chr17 55783098 55783306 -33721247 - MIR SINE MIR -6 256 19 950 256 61 24 chr17 55783350 55783807 -33720746 - L1ME4a LINE L1 -62 6059 5538 456 252 0 15 chr17 55783998 55784133 -33720420 - L1MB8 LINE L1 -6 6172 6040 6326 110 13 1 chr17 55784134 55785108 -33719445 + L1PB1 LINE L1 5162 6149 -2 2753 188 69 17 chr17 55785174 55785769 -33718784 - L1MB8 LINE L1 -182 6002 5377 260 284 26 0 chr17 55785773 55785889 -33718664 - HAL1b LINE L1 0 1348 1230 396 0 0 0 chr17 55785908 55785952 -33718601 + (TG)n Simple_repeat Simple_repeat 2 45 0 415 238 140 14 chr17 55786285 55786428 -33718125 + MIR SINE MIR 10 170 -92 910 208 204 17 chr17 55787673 55787884 -33716669 - MLT1F1 LTR MaLR -2 565 395 1166 196 47 116 chr17 55787884 55788042 -33716511 + MSTD LTR MaLR 2 169 -227 1946 108 52 0 chr17 55788042 55788310 -33716243 + AluSp SINE Alu 1 282 -31 1166 196 47 116 chr17 55788310 55788575 -33715978 + MSTD LTR MaLR 169 396 0 910 208 204 17 chr17 55788575 55788668 -33715885 - MLT1F1 LTR MaLR -172 395 177 287 194 60 15 chr17 55788711 55788778 -33715775 - MLT1F1 LTR MaLR -491 76 7 254 225 108 100 chr17 55788963 55789203 -33715350 - L1MB8 LINE L1 -1955 4191 3950 2210 112 0 13 chr17 55789500 55789803 -33714750 + AluSx SINE Alu 1 299 -13 489 203 216 0 chr17 55790211 55790359 -33714194 + MER5A DNA MER1_type 4 183 -6 428 175 87 29 chr17 55790369 55790439 -33714114 + MER5B DNA MER1_type 13 92 -86 947 181 71 33 chr17 55790439 55790649 -33713904 + MER20 DNA MER1_type 2 219 0 428 175 87 29 chr17 55790649 55790681 -33713872 + MER5B DNA MER1_type 92 121 -57 1616 174 46 26 chr17 55790715 55791020 -33713533 + AluJo SINE Alu 1 311 -1 362 278 61 2 chr17 55791062 55791204 -33713349 - MER5A DNA MER1_type -27 162 2 2345 105 129 5 chr17 55791236 55791617 -33712936 + MSTA LTR MaLR 1 428 0 2363 102 0 0 chr17 55792263 55792558 -33711995 - AluSg SINE Alu -15 295 1 1383 182 17 120 chr17 55793252 55793559 -33710994 - MLT1A1 LTR MaLR 0 365 109 2437 71 120 0 chr17 55793559 55793884 -33710669 + THE1B LTR MaLR 1 364 0 1383 182 17 120 chr17 55793884 55793983 -33710570 - MLT1A1 LTR MaLR -256 109 1 1692 189 36 36 chr17 55794143 55794530 -33710023 - MER96B DNA MER1_type? -1 416 30 1969 174 81 24 chr17 55795053 55795381 -33709172 - L1MB3 LINE L1 -7 6176 5813 2184 133 0 0 chr17 55795381 55795690 -33708863 - AluSx SINE Alu -3 309 1 1969 174 81 24 chr17 55795690 55795816 -33708737 - L1MB3 LINE L1 -370 5813 5696 761 32 0 0 chr17 55797407 55797500 -33707053 - L1PA7 LINE L1 -1 6153 6061 364 297 52 70 chr17 55797630 55797711 -33706842 + MIR SINE MIR 32 113 -149 2251 113 10 3 chr17 55797711 55798020 -33706533 - AluSx SINE Alu -1 311 1 364 297 52 70 chr17 55798020 55798167 -33706386 + MIR SINE MIR 113 256 -6 1564 293 144 37 chr17 55798467 55799828 -33704725 + L2 LINE L2 1564 3122 -191 2095 125 128 13 chr17 55799828 55800211 -33704342 + MSTA LTR MaLR 1 427 -1 1564 293 144 37 chr17 55800211 55800425 -33704128 + L2 LINE L2 3122 3312 -1 2232 120 7 0 chr17 55801600 55801900 -33702653 + AluSx SINE Alu 1 302 -10 2338 92 3 7 chr17 55803176 55803481 -33701072 - AluSg SINE Alu -6 304 1 3653 92 29 0 chr17 55803489 55804001 -33700552 - L1PA14 LINE L1 -17 6144 5618 334 264 120 0 chr17 55804026 55804151 -33700402 + MIR SINE MIR 14 153 -109 2133 130 7 10 chr17 55805469 55805769 -33698784 - AluSx SINE Alu -13 299 1 193 287 11 46 chr17 55806319 55806406 -33698147 - MIR SINE MIR -85 123 40 184 364 78 32 chr17 55806351 55806634 -33697919 - L2 LINE L2 -474 2840 2545 * 352 303 118 14 chr17 55806713 55806918 -33697635 + MIR SINE MIR 4 230 -32 523 178 198 8 chr17 55807118 55807299 -33697254 + MER33 DNA MER1_type 1 214 -103 309 297 28 21 chr17 55807345 55807490 -33697063 - MIR SINE MIR -14 248 103 541 144 22 0 chr17 55807502 55807592 -33696961 + MER33 DNA MER1_type 272 363 0 1452 219 52 15 chr17 55807600 55807684 -33696869 + MER58B DNA MER1_type 1 80 -2340 1459 167 9 103 chr17 55807684 55807891 -33696662 - AluJo SINE Alu -13 299 133 225 0 0 0 chr17 55807891 55807916 -33696637 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1459 167 9 103 chr17 55807916 55808038 -33696515 - AluJo SINE Alu -179 133 1 1452 219 52 15 chr17 55808038 55808282 -33696271 + MER58B DNA MER1_type 80 341 0 1378 98 0 0 chr17 55808906 55809080 -33695473 - AluSc SINE Alu -5 304 131 515 201 178 29 chr17 55809538 55809712 -33694841 + MER33 DNA MER1_type 13 212 -112 241 328 128 10 chr17 55810601 55810805 -33693748 - L2 LINE L2 -114 3199 2972 1948 117 3 38 chr17 55810995 55811285 -33693268 + AluSx SINE Alu 24 303 -9 1272 229 89 32 chr17 55811288 55811694 -33692859 - L1ME1 LINE L1 -31 6135 5707 522 287 51 47 chr17 55811698 55811973 -33692580 - L2 LINE L2 -562 2752 2477 596 220 19 91 chr17 55812046 55812255 -33692298 + HAL1b LINE L1 415 608 -740 367 288 26 100 chr17 55812256 55812527 -33692026 + HAL1b LINE L1 1098 1348 0 213 39 0 0 chr17 55813337 55813363 -33691190 + (TTA)n Simple_repeat Simple_repeat 2 27 0 614 106 64 0 chr17 55813694 55813788 -33690765 + L1MD3 LINE L1 7888 7987 -8 678 206 47 6 chr17 55813801 55813971 -33690582 + L1ME3A LINE L1 5989 6165 -5 787 176 17 57 chr17 55816651 55816825 -33687728 + MER20 DNA MER1_type 1 167 -52 3433 115 28 22 chr17 55816825 55817321 -33687232 - MER1A DNA MER1_type 0 529 31 386 250 38 0 chr17 55819080 55819160 -33685393 - MER81 DNA DNA -30 84 2 1722 230 92 43 chr17 55819540 55819670 -33684883 - L1MC4 LINE L1 -1 8041 7919 210 37 0 0 chr17 55819670 55819697 -33684856 + (CA)n Simple_repeat Simple_repeat 2 28 0 1722 230 92 43 chr17 55819697 55820261 -33684292 - L1MC4 LINE L1 -123 7919 7313 23 0 0 0 chr17 55820437 55820460 -33684093 + AT_rich Low_complexity Low_complexity 1 23 0 227 208 0 0 chr17 55820510 55820558 -33683995 + A-rich Low_complexity Low_complexity 1 48 0 1992 145 0 7 chr17 55821772 55822076 -33682477 + AluJo SINE Alu 1 302 -10 329 247 54 0 chr17 55822331 55822424 -33682129 - MIR SINE MIR -75 187 90 197 226 12 0 chr17 55822636 55822720 -33681833 + (TA)n Simple_repeat Simple_repeat 1 85 0 8094 32 13 0 chr17 55822805 55824498 -33680055 - L1PA4 LINE L1 0 6155 4447 5275 35 7 0 chr17 55824498 55825117 -33679436 + L1P LINE L1 3752 4374 -1772 1412 249 21 9 chr17 55825287 55825613 -33678940 + LTR16C LTR ERVL 149 478 -13 381 275 22 105 chr17 55825736 55825965 -33678588 + MLT1H LTR MaLR 259 468 -81 1094 250 44 67 chr17 55826143 55826341 -33678212 + MLT1H LTR MaLR 2 203 -346 2350 69 0 10 chr17 55826341 55826629 -33677924 + AluY SINE Alu 21 305 -6 1094 250 44 67 chr17 55826629 55826910 -33677643 + MLT1H LTR MaLR 203 470 -79 2874 126 26 2 chr17 55827880 55828310 -33676243 + L1MA4A LINE L1 5858 6297 -6 31791 110 19 57 chr17 55828926 55835341 -33669212 + L1PA7 LINE L1 12 6167 0 223 265 145 12 chr17 55835358 55835441 -33669112 - MER5B DNA MER1_type -84 94 1 504 77 0 245 chr17 55835569 55835712 -33668841 + MER50 LTR ERV1 497 604 -130 26 50 0 0 chr17 55836262 55836302 -33668251 + AT_rich Low_complexity Low_complexity 1 40 0 1999 187 64 0 chr17 55836309 55836652 -33667901 + MLT1A1 LTR MaLR 1 365 0 846 95 6 76 chr17 55836689 55836847 -33667706 + L1MA8 LINE L1 6070 6216 -75 294 29 0 0 chr17 55836867 55836902 -33667651 + (TG)n Simple_repeat Simple_repeat 2 36 0 519 261 42 0 chr17 55836902 55837021 -33667532 - MLT1A1 LTR MaLR -94 271 148 195 69 0 0 chr17 55837035 55837064 -33667489 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 3848 140 25 30 chr17 55837064 55837709 -33666844 - L1MA8 LINE L1 -39 6252 5607 2371 100 0 0 chr17 55837709 55838009 -33666544 - AluSg SINE Alu -10 300 1 3848 140 25 30 chr17 55838009 55838061 -33666492 - L1MA8 LINE L1 -684 5607 5556 2898 275 73 26 chr17 55838119 55838640 -33665913 + L2 LINE L2 80 575 -2739 2451 78 0 3 chr17 55838640 55838947 -33665606 + AluY SINE Alu 1 306 -5 2898 275 73 26 chr17 55838947 55839127 -33665426 + L2 LINE L2 575 745 -2569 996 208 40 5 chr17 55839127 55839329 -33665224 - MER3 DNA MER1_type 0 209 1 2898 275 73 26 chr17 55839329 55839729 -33664824 + L2 LINE L2 745 1234 -2080 759 245 81 36 chr17 55839730 55840089 -33664464 + L1M4 LINE L1 4397 4771 -1375 662 192 25 81 chr17 55840092 55840290 -33664263 + LTR41 LTR ERVL 1 187 -586 5528 91 8 11 chr17 55840525 55841286 -33663267 - L1PA12 LINE L1 -15 6153 5395 970 79 0 0 chr17 55841286 55841412 -33663141 + AluY SINE Alu 186 311 0 292 203 0 0 chr17 55841432 55841496 -33663057 + L2 LINE L2 646 709 -2605 1327 161 22 7 chr17 55841497 55841771 -33662782 - L1P LINE L1 -759 5387 5110 751 272 191 30 chr17 55841780 55842151 -33662402 + L2 LINE L2 2883 3313 0 831 296 140 22 chr17 55842361 55842906 -33661647 + L2 LINE L2 2702 3309 -4 2199 165 22 0 chr17 55842907 55843265 -33661288 - MER47A DNA MER2_type 0 366 1 21 36 0 0 chr17 55843663 55843691 -33660862 + AT_rich Low_complexity Low_complexity 1 28 0 543 294 83 14 chr17 55844090 55844308 -33660245 - MIR SINE MIR -4 258 26 365 318 98 58 chr17 55844625 55844899 -33659654 - L2 LINE L2 -346 2968 2684 1919 153 0 10 chr17 55845838 55846139 -33658414 + AluJo SINE Alu 1 298 -14 220 250 19 0 chr17 55846189 55846241 -33658312 + MIR SINE MIR 83 135 -73 1602 229 63 69 chr17 55846464 55846971 -33657582 + MLT1D LTR MaLR 1 504 -1 381 216 0 0 chr17 55847218 55847306 -33657247 + CT-rich Low_complexity Low_complexity 4 91 0 297 184 0 0 chr17 55847916 55847965 -33656588 - MIR SINE MIR -65 143 95 2256 156 19 57 chr17 55849508 55849870 -33654683 - MER57A LTR ERV1 -1 402 28 1583 166 0 0 chr17 55849870 55850111 -33654442 + AluJb SINE Alu 41 281 -31 1699 83 0 19 chr17 55850111 55850326 -33654227 - AluSg/x SINE Alu -16 296 85 2256 156 19 57 chr17 55850326 55850380 -33654173 - MER57A LTR ERV1 -373 30 1 829 237 111 0 chr17 55850401 55850591 -33653962 - MER58A DNA MER1_type -3 221 11 232 375 23 31 chr17 55850848 55850874 -33653679 + MIR SINE MIR 20 45 -163 1982 75 4 8 chr17 55850874 55851128 -33653425 - L1PA7 LINE L1 0 6154 5902 232 375 23 31 chr17 55851128 55851229 -33653324 + MIR SINE MIR 45 146 -62 4266 163 6 0 chr17 55851794 55852449 -33652104 - MER72 LTR ERV1 -4 718 60 2392 132 66 15 chr17 55852468 55852862 -33651691 + MSTA LTR MaLR 3 416 -12 9179 171 36 16 chr17 55852874 55854480 -33650073 + MSTA-int LTR MaLR 1 1639 -12 3163 135 51 9 chr17 55854512 55855087 -33649466 + MER4B LTR ERV1 13 779 0 227 108 0 0 chr17 55855088 55855125 -33649428 + MSTA-int LTR MaLR 1543 1579 -1 2041 162 118 8 chr17 55855133 55855515 -33649038 + MSTA LTR MaLR 5 428 0 2757 133 42 5 chr17 55855515 55855942 -33648611 - MER65A LTR ERV1 -2 443 1 316 254 145 7 chr17 55855944 55856082 -33648471 + MIR SINE MIR 79 235 -27 384 295 14 27 chr17 55856405 55856564 -33647989 + MER21B LTR ERV1 1 196 -409 * 1866 223 48 36 chr17 55856539 55857141 -33647412 + MER21B LTR ERV1 98 756 -107 9607 119 27 8 chr17 55857432 55858869 -33645684 - Tigger4(Zombi) DNA MER2_type 0 2731 1268 1291 201 70 11 chr17 55858869 55859142 -33645411 + MER87 LTR ERV1 1 289 -252 540 314 7 0 chr17 55859231 55859384 -33645169 + MER117 DNA MER1_type 7 160 -37 985 261 60 73 chr17 55859542 55860174 -33644379 + L1MC4a LINE L1 5258 5881 -1927 207 70 47 23 chr17 55860183 55860226 -33644327 + (TA)n Simple_repeat Simple_repeat 2 45 0 743 230 80 30 chr17 55861325 55861525 -33643028 + MER63A DNA MER1_type 1 210 0 238 267 50 0 chr17 55861699 55861759 -33642794 - MIR SINE MIR -110 152 90 231 315 65 60 chr17 55862047 55862231 -33642322 - MIR SINE MIR -70 192 8 245 259 93 12 chr17 55863028 55863114 -33641439 + MIR SINE MIR 79 172 -36 862 211 74 0 chr17 55863130 55863305 -33641248 - MER58A DNA MER1_type -1 223 36 303 339 115 11 chr17 55863352 55863526 -33641027 + MIR SINE MIR 50 241 -21 891 163 0 15 chr17 55863783 55863918 -33640635 + FLAM_C SINE Alu 1 133 0 442 272 136 6 chr17 55864243 55864405 -33640148 + MIR SINE MIR 5 187 -75 363 338 136 31 chr17 55864643 55865149 -33639404 - L2 LINE L2 0 3272 2722 308 176 0 14 chr17 55865758 55865832 -33638721 + GA-rich Low_complexity Low_complexity 4 76 0 314 333 45 0 chr17 55865930 55866041 -33638512 - MIR3 SINE MIR -51 157 42 808 266 94 22 chr17 55866255 55866574 -33637979 - LTR33 LTR ERVL -178 343 2 325 306 146 0 chr17 55866992 55867136 -33637417 + L2 LINE L2 3149 3313 0 207 200 0 22 chr17 55867137 55867182 -33637371 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 525 301 20 15 chr17 55867296 55867495 -33637058 + MLT1J2 LTR MaLR 37 236 -214 822 215 23 6 chr17 55867524 55867701 -33636852 + MLT2B3 LTR ERVL 1 180 -374 298 143 0 0 chr17 55867701 55867743 -33636810 - Ricksha DNA DNA -1537 509 468 379 199 48 14 chr17 55867743 55867889 -33636664 + CT-rich Low_complexity Low_complexity 4 154 0 963 139 0 0 chr17 55868003 55868080 -33636473 + (G)n Simple_repeat Simple_repeat 1 257 0 963 139 0 0 chr17 55868080 55868260 -33636293 + (G)n Simple_repeat Simple_repeat 1 180 0 654 192 4 23 chr17 55868374 55868636 -33635917 + CT-rich Low_complexity Low_complexity 1 256 0 304 120 40 0 chr17 55868659 55868709 -33635844 + MLT2B3 LTR ERVL 503 554 0 396 213 128 64 chr17 55868746 55868887 -33635666 + MLT1J2 LTR MaLR 287 436 -14 364 241 82 44 chr17 55869113 55869271 -33635282 - MIR SINE MIR -22 240 77 271 252 56 47 chr17 55869485 55869592 -33634961 - MIR SINE MIR -56 152 45 387 328 15 30 chr17 55870802 55871003 -33633550 + MIR SINE MIR 50 247 -15 2195 125 3 0 chr17 55871217 55871514 -33633039 + AluSx SINE Alu 1 298 -14 2625 184 45 10 chr17 55871514 55872024 -33632529 - L1MB5 LINE L1 -3 6171 5644 473 311 14 0 chr17 55872133 55872281 -33632272 + MIR SINE MIR 65 214 -48 187 262 16 33 chr17 55873040 55873101 -33631452 + L2 LINE L2 2905 2964 -350 229 329 255 7 chr17 55873254 55873403 -33631150 - MER91A DNA MER1_type -3 193 8 194 289 155 10 chr17 55873498 55873595 -33630958 + L2 LINE L2 3139 3249 -23 230 167 0 0 chr17 55874021 55874063 -33630490 + L2 LINE L2 3223 3264 -8 1221 152 67 13 chr17 55874510 55874734 -33629819 + MER46A DNA MER2_type 1 236 0 211 185 31 46 chr17 55874989 55875054 -33629499 - MER5B DNA MER1_type -46 132 69 2111 173 26 3 chr17 55875086 55875438 -33629115 - MLT1A1 LTR MaLR 0 365 6 1928 159 3 3 chr17 55875438 55875740 -33628813 + AluJo SINE Alu 1 302 -10 231 307 0 0 chr17 55877113 55877188 -33627365 - L2 LINE L2 -661 2653 2579 570 279 7 0 chr17 55877674 55877821 -33626732 - MER5B DNA MER1_type -2 176 29 22 70 0 0 chr17 55877821 55877864 -33626689 + AT_rich Low_complexity Low_complexity 1 43 0 1910 206 27 29 chr17 55877910 55878352 -33626201 - L1MA10 LINE L1 -24 6310 5870 3561 125 22 22 chr17 55878357 55878803 -33625750 + L1MA9 LINE L1 5283 5731 -581 20795 30 3 0 chr17 55878803 55882026 -33622527 + L1PA3 LINE L1 2920 6155 0 3561 125 22 22 chr17 55882026 55882172 -33622381 + L1MA9 LINE L1 5730 5875 -437 774 192 99 0 chr17 55882243 55882415 -33622138 - MER5A DNA MER1_type 0 189 1 360 368 16 6 chr17 55882432 55882614 -33621939 + MIR SINE MIR 61 244 -18 1754 132 0 16 chr17 55883109 55883360 -33621193 - AluSx SINE Alu -17 295 49 184 222 0 0 chr17 55883419 55883455 -33621098 - MIR SINE MIR -59 149 114 538 51 19 0 chr17 55883625 55883712 -33620841 - L1M3 LINE L1 -831 5460 5395 298 272 70 0 chr17 55884134 55884292 -33620261 - MIR3 SINE MIR -16 192 24 293 206 213 50 chr17 55884488 55884648 -33619905 - MIR SINE MIR -12 250 65 270 215 0 0 chr17 55886310 55886389 -33618164 + (TG)n Simple_repeat Simple_repeat 1 79 0 809 164 55 101 chr17 55886769 55886988 -33617565 - MER3 DNA MER1_type 0 209 1 946 231 52 0 chr17 55886997 55887209 -33617344 + MER58A DNA MER1_type 2 224 0 242 308 87 10 chr17 55887613 55887717 -33616836 - MIR SINE MIR -75 133 22 186 43 0 0 chr17 55888210 55888233 -33616320 + (TCCA)n Simple_repeat Simple_repeat 1 23 0 186 103 0 0 chr17 55888232 55888261 -33616292 + (CCTA)n Simple_repeat Simple_repeat 1 29 0 325 336 42 0 chr17 55888837 55888980 -33615573 + MIR3 SINE MIR 60 208 0 203 325 104 18 chr17 55889478 55889641 -33614912 - MIR3 SINE MIR -9 199 23 340 270 22 22 chr17 55889687 55889824 -33614729 - MER103 DNA DNA -10 156 20 2439 158 19 42 chr17 55889987 55890215 -33614338 + MLT1C LTR MaLR 4 217 -250 2429 93 0 3 chr17 55890215 55890516 -33614037 + AluSx SINE Alu 1 300 -12 2439 158 19 42 chr17 55890516 55890762 -33613791 + MLT1C LTR MaLR 217 467 0 198 0 0 0 chr17 55891052 55891074 -33613479 + (CATA)n Simple_repeat Simple_repeat 4 25 0 231 193 0 0 chr17 55891074 55891131 -33613422 - L1MC4 LINE L1 -1339 6703 6647 1162 270 50 26 chr17 55891148 55891489 -33613064 - MLT1I LTR MaLR -2 407 59 369 0 0 0 chr17 55891760 55891801 -33612752 + (TG)n Simple_repeat Simple_repeat 2 42 0 384 329 36 40 chr17 55892110 55892384 -33612169 + L2 LINE L2 1979 2251 -1063 379 279 0 29 chr17 55892700 55892804 -33611749 - MIR SINE MIR -78 130 30 441 210 108 57 chr17 55892810 55892986 -33611567 - L2 LINE L2 0 3313 3129 218 358 28 22 chr17 55893955 55894134 -33610419 - L2 LINE L2 -448 2866 2687 415 335 52 9 chr17 55894731 55894943 -33609610 + MIR SINE MIR 10 230 -32 285 324 124 31 chr17 55894985 55895210 -33609343 + L2 LINE L2 3027 3272 0 352 36 18 18 chr17 55896115 55896170 -33608383 + (TC)n Simple_repeat Simple_repeat 1 55 0 2216 131 0 0 chr17 55897625 55897931 -33606622 - AluSx SINE Alu -6 306 1 342 314 101 16 chr17 55898793 55898981 -33605572 - MIR SINE MIR -11 251 48 1495 213 94 61 chr17 55899422 55899789 -33604764 + L2 LINE L2 2148 2543 -771 2362 85 10 0 chr17 55899789 55900084 -33604469 - AluSg SINE Alu -12 298 1 1495 213 94 61 chr17 55900084 55900303 -33604250 + L2 LINE L2 2543 2753 -561 292 219 148 69 chr17 55900849 55901049 -33603504 + MLT1H LTR MaLR 90 316 -93 358 291 67 24 chr17 55901153 55901318 -33603235 + MIR SINE MIR 76 247 -15 191 173 0 62 chr17 55902397 55902478 -33602075 + CT-rich Low_complexity Low_complexity 1 76 0 262 309 41 0 chr17 55903000 55903097 -33601456 + L2 LINE L2 3172 3272 0 188 313 179 8 chr17 55903319 55903453 -33601100 - MIR3 SINE MIR -15 193 37 292 273 170 18 chr17 55904313 55904478 -33600075 - L2 LINE L2 0 3313 3124 246 324 95 6 chr17 55904609 55904788 -33599765 - L2 LINE L2 -340 2974 2780 330 129 0 0 chr17 55904942 55905004 -33599549 + (CAGC)n Simple_repeat Simple_repeat 1 62 0 209 293 0 17 chr17 55905007 55905065 -33599488 - L2 LINE L2 -12 3301 3245 25 83 0 0 chr17 55907883 55907943 -33596610 + AT_rich Low_complexity Low_complexity 1 60 0 22 35 0 0 chr17 55909331 55909360 -33595193 + AT_rich Low_complexity Low_complexity 1 29 0 2370 88 0 0 chr17 55909547 55909844 -33594709 - AluY SINE Alu -14 297 1 281 307 61 22 chr17 55910085 55910316 -33594237 - L1MC4a LINE L1 -1913 5895 5656 299 321 67 8 chr17 55910514 55910648 -33593905 - MER5B DNA MER1_type 0 178 37 499 229 163 13 chr17 55911653 55911806 -33592747 + MER5A DNA MER1_type 14 189 0 180 150 75 0 chr17 55913230 55913270 -33591283 - L2 LINE L2 0 3313 3271 272 319 58 27 chr17 55913397 55913585 -33590968 - L2 LINE L2 -205 3108 2915 406 298 46 8 chr17 55913625 55913756 -33590797 - L2 LINE L2 -493 2821 2686 2879 154 38 24 chr17 55913995 55914500 -33590053 + MLT2B2 LTR ERVL 1 512 -3 241 307 107 0 chr17 55914637 55914777 -33589776 - MIR SINE MIR -1 261 107 285 210 50 76 chr17 55914988 55915107 -33589446 - MIR3 SINE MIR -11 197 82 209 352 75 59 chr17 55915935 55916242 -33588311 + L2 LINE L2 2960 3271 -1 260 273 49 56 chr17 55916436 55916579 -33587974 + MIR SINE MIR 121 262 0 948 225 41 14 chr17 55916813 55917031 -33587522 - MER58A DNA MER1_type 0 224 1 288 246 0 0 chr17 55917364 55917429 -33587124 - MIR SINE MIR -131 131 67 232 210 30 174 chr17 55918522 55918689 -33585864 + MIR SINE MIR 108 250 -12 376 257 60 68 chr17 55919257 55919506 -33585047 + L1M4 LINE L1 3698 3944 -2202 383 323 8 8 chr17 55920289 55920422 -33584131 + MIR SINE MIR 19 151 -57 1749 167 104 13 chr17 55920512 55920830 -33583723 - MER7A DNA MER2_type -1 345 1 243 234 62 0 chr17 55921099 55921163 -33583390 - L2 LINE L2 0 3272 3205 303 304 56 8 chr17 55922287 55922412 -33582141 - MER20B DNA MER1_type -597 186 56 203 323 32 11 chr17 55923426 55923519 -33581034 - MIR SINE MIR -80 128 34 4040 112 72 52 chr17 55923585 55924841 -33579712 + pTR5 LTR ERV1 741 2468 0 2050 146 62 6 chr17 55924841 55925177 -33579376 + THE1B LTR MaLR 3 357 -7 590 295 31 0 chr17 55925206 55925399 -33579154 - MIR SINE MIR -1 261 63 435 239 66 24 chr17 55925696 55925863 -33578690 - MIR SINE MIR -10 252 79 2515 78 0 0 chr17 55926384 55926691 -33577862 - AluY SINE Alu -4 307 1 425 294 102 6 chr17 55926961 55927138 -33577415 + MIR SINE MIR 54 247 -15 541 269 23 82 chr17 55927385 55927642 -33576911 - MIR SINE MIR -6 256 15 286 346 47 51 chr17 55928345 55928859 -33575694 + L2 LINE L2 2327 2838 -476 307 341 73 47 chr17 55928905 55929248 -33575305 + L2 LINE L2 2919 3270 -2 2191 107 38 0 chr17 55930265 55930554 -33573999 + AluSx SINE Alu 1 300 -12 1277 110 0 0 chr17 55930554 55930727 -33573826 + AluSg/x SINE Alu 134 306 -6 435 113 0 88 chr17 55930765 55930845 -33573708 + MADE1 DNA Mariner 1 73 -7 770 174 22 3 chr17 55931042 55931199 -33573354 - L1MC/D LINE L1 -470 5704 5570 742 162 19 7 chr17 55931406 55931560 -33572993 + MER5A DNA MER1_type 28 183 -6 204 253 27 53 chr17 55932025 55932100 -33572453 + MIR SINE MIR 3 75 -187 2613 106 59 10 chr17 55932163 55932569 -33571984 + MSTA LTR MaLR 1 426 -2 2797 146 73 26 chr17 55932799 55933346 -33571207 + L1MB5 LINE L1 5572 6144 -30 25 31 0 0 chr17 55933350 55933382 -33571171 + AT_rich Low_complexity Low_complexity 1 32 0 296 297 9 36 chr17 55934126 55934237 -33570316 - MER5A DNA MER1_type -9 180 73 2503 71 0 7 chr17 55934240 55934548 -33570005 - AluY SINE Alu -5 306 1 972 117 0 0 chr17 55934550 55934678 -33569875 - AluSc SINE Alu -14 295 168 1617 169 51 39 chr17 55934779 55935110 -33569443 + MER58B DNA MER1_type 7 341 0 287 254 45 124 chr17 55935518 55935695 -33568858 + MER20B DNA MER1_type 1 163 -620 340 296 132 11 chr17 55936068 55936257 -33568296 + MIR SINE MIR 9 220 -42 1221 153 43 10 chr17 55936428 55936637 -33567916 - MER20 DNA MER1_type -3 216 1 1351 163 48 8 chr17 55936669 55936921 -33567632 - L1PB4 LINE L1 -2 6154 5893 190 271 102 0 chr17 55937050 55937109 -33567444 - L2 LINE L2 -40 3232 3168 226 317 20 20 chr17 55937800 55937901 -33566652 - MIR SINE MIR -8 254 154 * 260 318 29 24 chr17 55937900 55938070 -33566483 - MER5B DNA MER1_type -6 172 2 286 324 20 20 chr17 55937919 55938067 -33566486 + MER5A DNA MER1_type 37 184 -5 436 288 9 71 chr17 55938265 55938477 -33566076 + MIR SINE MIR 14 212 -50 2016 175 110 17 chr17 55938929 55939391 -33565162 + MLT1D LTR MaLR 1 505 0 381 257 32 83 chr17 55940894 55940972 -33563581 + L2 LINE L2 2059 2139 -1175 2301 115 28 28 chr17 55940972 55941336 -33563217 + THE1B LTR MaLR 1 364 0 381 257 32 83 chr17 55941336 55941475 -33563078 + L2 LINE L2 2139 2265 -1049 562 238 81 12 chr17 55941493 55941653 -33562900 + MER5B DNA MER1_type 1 171 -7 * 609 312 156 16 chr17 55941652 55942158 -33562395 + L2 LINE L2 2285 2861 -453 619 216 7 39 chr17 55942336 55942476 -33562077 + L2 LINE L2 3165 3301 -12 225 0 0 0 chr17 55942476 55942501 -33562052 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 619 216 7 39 chr17 55942501 55942513 -33562040 + L2 LINE L2 3301 3312 -1 2529 213 44 6 chr17 55942844 55943366 -33561187 + MLT1F LTR MaLR 1 542 0 354 282 55 0 chr17 55943452 55943562 -33560991 + MIR SINE MIR 102 217 -45 591 270 147 5 chr17 55943865 55944076 -33560477 - MIR SINE MIR -7 255 15 304 261 59 50 chr17 55944262 55944381 -33560172 - MIR SINE MIR -123 139 20 5362 183 79 27 chr17 55944779 55944940 -33559613 - L1MA8 LINE L1 -5 6286 6135 2316 101 0 3 chr17 55944940 55945236 -33559317 - AluSx SINE Alu -17 295 1 5362 183 79 27 chr17 55945236 55945437 -33559116 - L1MA8 LINE L1 -156 6135 5946 2633 113 6 3 chr17 55945437 55945800 -33558753 + THE1B LTR MaLR 1 364 0 5362 183 79 27 chr17 55945800 55947324 -33557229 - L1MA8 LINE L1 -345 5946 4255 677 44 0 11 chr17 55947324 55947414 -33557139 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 5362 183 79 27 chr17 55947414 55947614 -33556939 - L1MA8 LINE L1 -2036 4255 4067 928 228 35 13 chr17 55947591 55947819 -33556734 - L1MC2 LINE L1 -493 5851 5619 * 9976 187 40 16 chr17 55948340 55948910 -33555643 - L1PA16 LINE L1 -9 6157 5602 2343 113 3 0 chr17 55948910 55949212 -33555341 + AluSp SINE Alu 1 303 -10 9976 187 40 16 chr17 55949212 55951801 -33552752 - L1PA16 LINE L1 -564 5602 2921 408 141 147 122 chr17 55951802 55951958 -33552595 + L1 LINE L1 5086 5245 -901 349 239 65 11 chr17 55952141 55952233 -33552320 + MIR SINE MIR 92 188 -74 1152 302 42 18 chr17 55952242 55952739 -33551814 + L2 LINE L2 2804 3312 -1 230 265 12 36 chr17 55952732 55952815 -33551738 + MIR SINE MIR 182 262 0 * 183 80 0 0 chr17 55953145 55953170 -33551383 + (CTG)n Simple_repeat Simple_repeat 2 26 0 3583 158 72 20 chr17 55953399 55954026 -33550527 - L1MA9 LINE L1 0 6312 5642 2343 96 0 7 chr17 55954026 55954327 -33550226 + AluSq SINE Alu 1 299 -14 3583 158 72 20 chr17 55954327 55954406 -33550147 - L1MA9 LINE L1 -670 5642 5569 880 256 107 36 chr17 55955180 55955613 -33548940 + L2 LINE L2 2601 3055 -217 2223 98 21 21 chr17 55955753 55956080 -33548473 + L1PA10 LINE L1 5841 6167 -1 1779 173 49 16 chr17 55956093 55956458 -33548095 - MLT1C LTR MaLR -90 377 1 23 0 0 0 chr17 55956463 55956486 -33548067 + AT_rich Low_complexity Low_complexity 1 23 0 470 311 66 9 chr17 55957123 55957335 -33547218 - MIR SINE MIR -11 251 28 514 305 122 32 chr17 55957565 55958007 -33546546 + LTR33 LTR ERVL 26 507 -14 281 305 2 10 chr17 55958022 55958140 -33546413 - MIR SINE MIR -63 145 36 180 310 35 23 chr17 55958684 55958771 -33545782 + L3b LINE CR1 1168 1255 -328 500 206 7 0 chr17 55959086 55959222 -33545331 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 446 281 38 27 chr17 55959330 55959522 -33545031 + MIR3 SINE MIR 11 204 -4 235 264 39 93 chr17 55959570 55959669 -33544884 + L2 LINE L2 2616 2702 -612 2145 118 9 19 chr17 55959669 55959984 -33544569 + AluSx SINE Alu 1 312 0 235 264 39 93 chr17 55959984 55960066 -33544487 + L2 LINE L2 2702 2787 -527 280 331 48 8 chr17 55960388 55960512 -33544041 + L2 LINE L2 3180 3308 -5 391 302 126 14 chr17 55960995 55961210 -33543343 + MIR SINE MIR 4 242 -20 1199 275 100 28 chr17 55961359 55962161 -33542392 + L2 LINE L2 2462 3313 0 297 0 0 0 chr17 55962659 55962692 -33541861 + (TG)n Simple_repeat Simple_repeat 2 34 0 1958 172 49 33 chr17 55963538 55964084 -33540469 + MLT2A2 LTR ERVL 1 554 0 210 171 0 0 chr17 55964102 55964143 -33540410 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 802 283 75 55 chr17 55964150 55964468 -33540085 - L2 LINE L2 -6 3307 2976 378 231 210 7 chr17 55964468 55964611 -33539942 - MER5B DNA MER1_type -3 175 4 802 283 75 55 chr17 55964611 55964762 -33539791 - L2 LINE L2 -337 2976 2829 207 0 0 0 chr17 55965909 55965932 -33538621 + (T)n Simple_repeat Simple_repeat 1 23 0 869 254 74 60 chr17 55966537 55966967 -33537586 - LTR16A1 LTR ERVL 0 457 22 247 286 61 0 chr17 55967317 55967415 -33537138 + MIR SINE MIR 111 214 -48 240 263 64 88 chr17 55968602 55968773 -33535780 + MLT1K LTR MaLR 5 171 -417 249 221 63 53 chr17 55968923 55969018 -33535535 + LTR67 LTR ERVL 457 552 -5 355 301 75 52 chr17 55969227 55969440 -33535113 + MIR SINE MIR 10 227 -35 2735 43 31 0 chr17 55970031 55970355 -33534198 + L1PA4 LINE L1 5819 6152 -3 2038 104 3 90 chr17 55970425 55970683 -33533870 - L1MA1 LINE L1 -4 6298 6078 2298 95 3 0 chr17 55970683 55970977 -33533576 - AluSx SINE Alu -17 295 1 2038 104 3 90 chr17 55970977 55971074 -33533479 - L1MA1 LINE L1 -224 6078 5974 513 151 0 94 chr17 55972021 55972127 -33532426 + MER21B LTR ERV1 12 107 -756 622 172 35 9 chr17 55972200 55972316 -33532237 + MER21B LTR ERV1 21 139 -724 1045 121 121 0 chr17 55972354 55972527 -33532026 + L1P5 LINE L1 5598 5791 -360 305 250 48 0 chr17 55972528 55972612 -33531941 + L1MC4 LINE L1 6614 6701 -1341 246 174 0 0 chr17 55972616 55972662 -33531891 + (TA)n Simple_repeat Simple_repeat 2 47 0 2267 130 24 16 chr17 55972662 55972678 -33531875 + L1PB1 LINE L1 5776 5790 -361 1023 156 0 0 chr17 55972678 55972857 -33531696 + (TA)n Simple_repeat Simple_repeat 2 180 0 2267 130 24 16 chr17 55972857 55973209 -33531344 + L1PB1 LINE L1 5790 6147 -4 186 43 0 0 chr17 55973266 55973289 -33531264 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3015 172 143 25 chr17 55973291 55973900 -33530653 + MER21B LTR ERV1 181 861 -2 230 263 35 0 chr17 55974423 55974480 -33530073 + L2 LINE L2 3207 3265 -7 1538 185 26 16 chr17 55974593 55974896 -33529657 + AluJo SINE Alu 1 306 -6 1282 253 55 101 chr17 55975359 55975505 -33529048 + MER21B LTR ERV1 98 249 -614 2973 134 71 10 chr17 55975505 55976027 -33528526 + L1MA7 LINE L1 5737 6290 -1 2184 108 0 7 chr17 55976035 55976332 -33528221 + AluSx SINE Alu 1 295 -17 1851 142 45 7 chr17 55976333 55976622 -33527931 - AluSx SINE Alu -12 300 1 1282 253 55 101 chr17 55976622 55977149 -33527404 + MER21B LTR ERV1 255 751 -112 21 36 0 0 chr17 55977157 55977185 -33527368 + AT_rich Low_complexity Low_complexity 1 28 0 216 305 17 59 chr17 55977598 55977716 -33526837 - MIR SINE MIR -41 221 109 534 296 70 12 chr17 55977731 55977903 -33526650 - MIR3 SINE MIR -7 201 20 310 327 137 39 chr17 55979923 55980128 -33524425 - MIR SINE MIR -16 246 22 242 178 0 44 chr17 55980812 55980857 -33523696 - L2 LINE L2 -18 3295 3253 342 285 22 36 chr17 55980996 55981133 -33523420 - L2 LINE L2 -211 3061 2927 1564 149 11 25 chr17 55981287 55981569 -33522984 + L1MA8 LINE L1 6009 6286 -5 24 0 0 0 chr17 55981569 55981593 -33522960 + AT_rich Low_complexity Low_complexity 1 24 0 462 258 133 20 chr17 55981783 55981934 -33522619 - MIR3 SINE MIR -14 194 27 392 271 103 9 chr17 55982727 55982834 -33521719 - L2 LINE L2 -4 3309 3193 1681 168 17 27 chr17 55982885 55983177 -33521376 - AluJo SINE Alu -23 289 1 2691 185 66 0 chr17 55983177 55983724 -33520829 - L1MD3 LINE L1 -2 7993 7411 324 164 0 45 chr17 55983724 55983791 -33520762 - MLT1F1 LTR MaLR -442 125 62 253 319 129 9 chr17 55983921 55984037 -33520516 - L2 LINE L2 -280 3033 2904 * 481 247 200 8 chr17 55984030 55984313 -33520240 + L2 LINE L2 2706 3040 -273 198 118 0 0 chr17 55984347 55984381 -33520172 + (CA)n Simple_repeat Simple_repeat 1 34 0 483 227 76 17 chr17 55984922 55985041 -33519512 - MIR SINE MIR -98 164 39 287 290 89 8 chr17 55985139 55985263 -33519290 + L2 LINE L2 3180 3313 0 2320 102 0 0 chr17 55986084 55986377 -33518176 + AluSc SINE Alu 1 293 -16 180 0 0 0 chr17 55986641 55986661 -33517892 + (A)n Simple_repeat Simple_repeat 1 20 0 1736 144 12 0 chr17 55986662 55986932 -33517621 - AluSx SINE Alu 0 303 31 435 253 106 35 chr17 55986933 55987103 -33517450 - MIR SINE MIR -28 234 53 321 289 13 0 chr17 55989323 55989399 -33515154 - MIR3 SINE MIR -50 158 82 345 237 58 93 chr17 55989402 55989541 -33515012 + MER94 DNA DNA 1 134 0 725 132 68 142 chr17 55989764 55989954 -33514599 - MSTD LTR MaLR 0 396 221 2303 141 30 15 chr17 55990140 55990538 -33514015 + L1PA16 LINE L1 5759 6157 -9 282 320 10 0 chr17 55990596 55990696 -33513857 - MIR SINE MIR 0 262 162 331 269 15 39 chr17 55990696 55990826 -33513727 + L1ME1 LINE L1 6040 6166 0 * 953 226 106 4 chr17 55990814 55991079 -33513474 + L1ME1 LINE L1 5871 6162 -4 418 252 118 25 chr17 55991087 55991206 -33513347 - MIR SINE MIR -86 176 47 186 313 182 0 chr17 55991983 55992082 -33512471 - MIR3 SINE MIR -22 186 70 * 219 200 0 0 chr17 55992050 55992090 -33512463 - MIR SINE MIR -162 100 61 * 246 240 173 13 chr17 55992082 55992157 -33512396 - MIR SINE MIR -87 121 35 * 502 301 124 0 chr17 55992128 55992321 -33512232 + MIR SINE MIR 33 249 -13 258 251 9 115 chr17 55992507 55992668 -33511885 - MIR SINE MIR -83 179 37 571 242 45 25 chr17 55993861 55994018 -33510535 + MIR3 SINE MIR 32 191 -17 202 331 87 31 chr17 55995144 55995271 -33509282 - L2 LINE L2 -1 3271 3138 845 250 122 58 chr17 55995571 55996093 -33508460 + L2 LINE L2 2760 3313 0 318 313 0 0 chr17 55996616 55996696 -33507857 - L2 LINE L2 -4 3268 3189 327 329 42 14 chr17 55996728 55996871 -33507682 - L2 LINE L2 0 3313 3167 402 170 245 20 chr17 55996911 55997058 -33507495 - MER58C DNA MER1_type -24 191 1 373 156 16 0 chr17 55998858 55998922 -33505631 + L1PA16 LINE L1 6093 6157 -9 2152 115 17 0 chr17 55999030 55999318 -33505235 + AluSx SINE Alu 6 298 -14 716 237 7 46 chr17 55999448 55999626 -33504927 + FRAM SINE Alu 1 172 0 400 349 53 6 chr17 55999626 55999795 -33504758 - L3 LINE CR1 -122 1455 1279 223 350 44 29 chr17 55999852 55999989 -33504564 - L3 LINE CR1 -398 1179 1041 320 269 62 62 chr17 56000242 56000387 -33504166 - MER5B DNA MER1_type -16 162 18 203 260 115 42 chr17 56000454 56000550 -33504003 - MER5A DNA MER1_type -1 188 86 190 254 175 0 chr17 56000740 56000803 -33503750 - L2 LINE L2 -2 3311 3238 231 232 71 0 chr17 56001041 56001097 -33503456 - MER117 DNA MER1_type -47 150 91 291 220 71 85 chr17 56001297 56001438 -33503115 - MIR3 SINE MIR -47 161 23 268 390 68 32 chr17 56001461 56001712 -33502841 + L2 LINE L2 3006 3265 -7 1316 251 161 17 chr17 56004153 56004620 -33499933 + MLT1H LTR MaLR 14 547 -2 544 311 130 48 chr17 56005125 56005624 -33498929 - L1ME4a LINE L1 -2 6119 5580 225 309 103 41 chr17 56005964 56006061 -33498492 + MIR SINE MIR 38 140 -68 628 65 65 0 chr17 56006081 56006174 -33498379 + L1M4c LINE L1 2296 2394 -3990 1632 157 8 4 chr17 56006174 56006441 -33498112 + L1MB3 LINE L1 5913 6180 -3 379 243 0 76 chr17 56006851 56006995 -33497558 - L2 LINE L2 0 3272 3140 274 252 114 52 chr17 56007442 56007576 -33496977 - MIR SINE MIR -65 143 22 1929 113 36 0 chr17 56007634 56007956 -33496597 + AluSx SINE Alu 1 332 0 249 208 19 0 chr17 56008309 56008362 -33496191 - Cheshire DNA MER1_type -1856 564 511 241 286 0 18 chr17 56008754 56008810 -33495743 - MIR SINE MIR -195 67 13 2380 90 0 0 chr17 56008831 56009131 -33495422 - AluSx SINE Alu -12 300 1 228 182 109 18 chr17 56009243 56009273 -33495280 - MLT2D LTR ERVL -4 440 414 324 0 0 0 chr17 56009273 56009309 -33495244 + (TG)n Simple_repeat Simple_repeat 2 37 0 228 182 109 18 chr17 56009309 56009333 -33495220 - MLT2D LTR ERVL -30 414 381 432 0 0 0 chr17 56009388 56009436 -33495117 + (TA)n Simple_repeat Simple_repeat 2 49 0 1597 199 75 9 chr17 56009452 56009784 -33494769 - MLT2D LTR ERVL -60 354 1 292 185 46 0 chr17 56009873 56009981 -33494572 + (TA)n Simple_repeat Simple_repeat 2 114 0 270 333 68 8 chr17 56010728 56010845 -33493708 - MIR SINE MIR -65 143 20 476 317 34 24 chr17 56011192 56011397 -33493156 - MIR SINE MIR -36 226 20 2245 63 16 33 chr17 56011460 56011763 -33492790 - AluY SINE Alu -13 298 1 387 298 97 0 chr17 56012363 56012487 -33492066 - MIR3 SINE MIR -23 185 50 23 33 0 0 chr17 56013215 56013245 -33491308 + AT_rich Low_complexity Low_complexity 1 30 0 32 75 0 0 chr17 56013698 56013765 -33490788 + AT_rich Low_complexity Low_complexity 1 67 0 202 325 185 6 chr17 56013803 56013960 -33490593 - MIR SINE MIR -77 185 1 288 0 0 0 chr17 56014346 56014378 -33490175 + (TG)n Simple_repeat Simple_repeat 1 32 0 227 137 88 10 chr17 56014384 56014486 -33490067 + (TA)n Simple_repeat Simple_repeat 2 111 0 181 226 214 24 chr17 56014615 56014699 -33489854 + MER5A DNA MER1_type 40 139 -50 1480 162 76 7 chr17 56015727 56016030 -33488523 - MER33 DNA MER1_type 0 324 1 437 223 132 0 chr17 56017057 56017178 -33487375 - MIR SINE MIR -55 207 71 487 309 37 11 chr17 56017594 56017782 -33486771 - MIR SINE MIR -21 241 49 542 201 110 12 chr17 56018948 56019033 -33485520 - MER104 DNA MER2_type -1718 180 105 225 0 0 0 chr17 56019033 56019058 -33485495 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 542 201 110 12 chr17 56019058 56019136 -33485417 - MER104 DNA MER2_type -1793 105 1 268 286 181 8 chr17 56019379 56019512 -33485041 + L2 LINE L2 3116 3271 -1 390 91 0 0 chr17 56020679 56020734 -33483819 + (TG)n Simple_repeat Simple_repeat 2 56 0 326 339 85 0 chr17 56021435 56021553 -33483000 + MIR SINE MIR 8 135 -127 367 262 143 18 chr17 56022053 56022221 -33482332 - MIR SINE MIR -8 254 66 939 166 6 17 chr17 56022335 56022510 -33482043 - L1MD3 LINE L1 -5 7990 7818 2815 138 2 5 chr17 56022510 56022922 -33481631 - MER1A DNA MER1_type 0 529 119 648 144 0 0 chr17 56022950 56023047 -33481506 - L1MD3 LINE L1 -170 7825 7729 27 62 0 0 chr17 56024000 56024048 -33480505 + AT_rich Low_complexity Low_complexity 1 48 0 250 291 68 48 chr17 56024255 56024358 -33480195 - L2 LINE L2 -6 3266 3162 397 272 81 60 chr17 56025490 56025568 -33478985 - MIR SINE MIR -24 238 163 2540 135 40 47 chr17 56025568 56025831 -33478722 - MSTB LTR MaLR 0 426 166 2549 72 0 0 chr17 56025831 56026136 -33478417 + AluSc SINE Alu 1 305 -4 2540 135 40 47 chr17 56026136 56026301 -33478252 - MSTB LTR MaLR -260 166 1 397 272 81 60 chr17 56026301 56026457 -33478096 - MIR SINE MIR -99 163 1 658 224 40 7 chr17 56027090 56027242 -33477311 + MIR SINE MIR 103 259 -3 326 280 194 6 chr17 56027696 56027858 -33476695 - MIR SINE MIR -62 146 2 541 299 145 10 chr17 56028518 56028725 -33475828 + MIR SINE MIR 28 262 0 2146 117 0 13 chr17 56029433 56029731 -33474822 - AluSx SINE Alu -18 294 1 21 0 0 0 chr17 56029788 56029809 -33474744 + AT_rich Low_complexity Low_complexity 1 21 0 392 311 170 49 chr17 56030524 56031110 -33473443 - L2 LINE L2 -1 3312 2662 1415 158 14 54 chr17 56031110 56031388 -33473165 + AluSx SINE Alu 46 312 0 1221 195 130 12 chr17 56031388 56031727 -33472826 - Charlie5 DNA MER1_type -37 2575 2197 573 202 32 8 chr17 56031695 56031819 -33472734 - Charlie5 DNA MER1_type -2485 127 1 * 289 228 13 25 chr17 56031872 56031951 -33472602 - LTR16C LTR ERVL -305 186 109 442 331 52 20 chr17 56032051 56032299 -33472254 - L2 LINE L2 -797 2517 2262 1163 217 5 0 chr17 56032342 56032540 -33472013 - MER8 DNA MER2_type -39 200 2 1620 163 56 11 chr17 56032649 56032919 -33471634 + AluJb SINE Alu 1 282 -30 189 346 26 0 chr17 56033635 56033713 -33470840 - L2 LINE L2 -2 3311 3232 254 319 59 25 chr17 56034661 56034824 -33469729 - MER5A DNA MER1_type -4 185 7 458 261 19 79 chr17 56035219 56035434 -33469119 - MIR3 SINE MIR -2 206 5 206 318 127 40 chr17 56035627 56035800 -33468753 - L2 LINE L2 -160 3112 2925 253 254 0 0 chr17 56035815 56035874 -33468679 - MER58A DNA MER1_type 0 224 166 511 217 125 0 chr17 56035884 56036004 -33468549 - MER58A DNA MER1_type 0 140 6 465 261 67 18 chr17 56036157 56036322 -33468231 + MIR SINE MIR 90 262 0 184 286 48 0 chr17 56036554 56036596 -33467957 + L2 LINE L2 3136 3179 -93 539 234 103 87 chr17 56036774 56037013 -33467540 - MIR SINE MIR -10 252 19 363 242 106 66 chr17 56037840 56038038 -33466515 + LTR67 LTR ERVL 352 557 0 191 373 0 0 chr17 56038266 56038325 -33466228 + L2 LINE L2 3229 3287 -26 309 360 67 6 chr17 56038384 56038562 -33465991 - MIR SINE MIR -72 190 2 224 222 14 0 chr17 56038579 56038651 -33465902 + A-rich Low_complexity Low_complexity 4 76 0 205 242 113 0 chr17 56039090 56039152 -33465401 - MIR SINE MIR -108 154 86 923 166 44 6 chr17 56039427 56039608 -33464945 - L1MA4 LINE L1 -217 6083 5896 4568 104 17 2 chr17 56039624 56040258 -33464295 - L1MA2 LINE L1 0 6304 5661 2417 83 20 9 chr17 56040277 56040627 -33463926 + L1M1 LINE L1 5262 5615 -689 * 10561 160 36 42 chr17 56040625 56041194 -33463359 - L1MA2 LINE L1 -392 5911 5341 273 29 0 0 chr17 56041194 56041228 -33463325 + (TG)n Simple_repeat Simple_repeat 1 34 0 10561 160 36 42 chr17 56041228 56041261 -33463292 - L1MA2 LINE L1 -962 5341 5309 1750 184 0 0 chr17 56041261 56041543 -33463010 + AluSx SINE Alu 5 286 -26 10561 160 36 42 chr17 56041543 56042470 -33462083 - L1MA2 LINE L1 -994 5309 4379 1956 122 19 26 chr17 56042470 56042781 -33461772 - AluSx SINE Alu -3 309 1 10561 160 36 42 chr17 56042781 56043494 -33461059 - L1MA2 LINE L1 -1924 4379 2608 825 133 0 0 chr17 56043496 56043616 -33460937 + L1MA4 LINE L1 6175 6294 -6 288 293 53 73 chr17 56043722 56043872 -33460681 + MIR SINE MIR 20 166 -96 2153 110 0 19 chr17 56043995 56044303 -33460250 - AluSx SINE Alu -10 302 1 606 311 43 5 chr17 56045916 56046125 -33458428 + MIR SINE MIR 2 218 -44 253 260 0 0 chr17 56046401 56046451 -33458102 + L2 LINE L2 3218 3267 -5 404 349 79 5 chr17 56047082 56047271 -33457282 - MIR SINE MIR -37 225 23 284 245 60 3 chr17 56047852 56047976 -33456577 - MIR SINE MIR -61 147 54 281 292 92 25 chr17 56049274 56049394 -33455159 - MIR3 SINE MIR -19 189 62 21 0 0 0 chr17 56049511 56049532 -33455021 + AT_rich Low_complexity Low_complexity 1 21 0 214 170 64 0 chr17 56049637 56049684 -33454869 - L2 LINE L2 -2 3311 3262 282 317 127 0 chr17 56050028 56050170 -33454383 + MIR SINE MIR 97 256 -6 329 304 58 52 chr17 56051148 56051339 -33453214 - MIR3 SINE MIR -4 204 13 231 188 0 0 chr17 56052317 56052365 -33452188 + (CACG)n Simple_repeat Simple_repeat 4 51 0 299 305 0 42 chr17 56052417 56052535 -33452018 + MER5B DNA MER1_type 1 113 -65 2403 88 10 0 chr17 56052561 56052866 -33451687 + AluSg SINE Alu 1 308 -2 235 242 84 53 chr17 56052948 56053043 -33451510 - MIR3 SINE MIR -54 154 57 355 239 15 179 chr17 56054301 56054502 -33450051 - MLT1H LTR MaLR -120 429 262 4077 178 61 6 chr17 56054688 56055502 -33449051 + L1MB7 LINE L1 5326 6184 0 708 205 58 6 chr17 56055572 56055743 -33448810 - MER104 DNA MER2_type 0 180 1 275 325 40 48 chr17 56057225 56057351 -33447202 + MIR SINE MIR 25 149 -59 207 0 0 0 chr17 56057553 56057576 -33446977 + (A)n Simple_repeat Simple_repeat 1 23 0 639 308 91 0 chr17 56058898 56059106 -33445447 + MIR SINE MIR 6 232 -30 194 305 152 25 chr17 56060240 56060435 -33444118 - L2 LINE L2 0 3313 3094 647 280 7 7 chr17 56060435 56060578 -33443975 + MER5B DNA MER1_type 1 143 -35 1094 183 83 0 chr17 56060582 56060822 -33443731 - L1MB7 LINE L1 0 6184 5925 639 291 115 11 chr17 56060876 56061259 -33443294 - L2 LINE L2 -275 3038 2621 347 220 0 66 chr17 56061534 56061625 -33442928 + L2 LINE L2 3186 3270 -2 216 297 10 50 chr17 56061808 56061909 -33442644 - L2 LINE L2 -1 3271 3175 283 236 185 4 chr17 56061953 56062091 -33442462 - MIR SINE MIR -8 200 30 488 283 21 9 chr17 56062201 56062346 -33442207 - MIR3 SINE MIR -8 200 56 497 315 0 8 chr17 56062366 56062496 -33442057 - MIR SINE MIR -64 144 16 1555 233 62 21 chr17 56062528 56062995 -33441558 + L1ME3 LINE L1 5670 6155 -7 479 250 122 14 chr17 56063538 56063890 -33440663 + L1ME4a LINE L1 5697 6118 -3 408 267 12 0 chr17 56064246 56064332 -33440221 - L2 LINE L2 0 3272 3186 290 341 24 24 chr17 56064422 56064548 -33440005 - MIR3 SINE MIR -73 135 10 193 204 0 45 chr17 56065033 56065077 -33439476 + L2 LINE L2 3005 3046 -267 359 331 15 8 chr17 56065193 56065326 -33439227 + L2 LINE L2 3179 3312 -1 228 202 6 196 chr17 56065337 56065510 -33439043 - L2 LINE L2 -182 3090 2951 2032 223 36 54 chr17 56065771 56065918 -33438635 + MER90 LTR ERV1 70 218 -396 1900 115 83 0 chr17 56065918 56066196 -33438357 + AluSx SINE Alu 1 301 -11 2032 223 36 54 chr17 56066196 56066283 -33438270 + MER90 LTR ERV1 218 305 -309 4218 48 8 0 chr17 56066283 56066767 -33437786 - L1PA6 LINE L1 -6 6148 5661 2032 223 36 54 chr17 56066767 56067086 -33437467 + MER90 LTR ERV1 305 614 0 1526 229 88 24 chr17 56067107 56067517 -33437036 - MER63B DNA MER1_type 0 436 1 277 220 17 0 chr17 56069079 56069138 -33435415 + MIR SINE MIR 78 137 -71 27 29 0 0 chr17 56069173 56069207 -33435346 + AT_rich Low_complexity Low_complexity 1 34 0 344 158 0 0 chr17 56069479 56069536 -33435017 - MER103 DNA DNA -74 92 36 837 228 38 0 chr17 56070102 56070286 -33434267 + MER20 DNA MER1_type 29 219 0 1077 184 65 73 chr17 56070657 56070748 -33433805 + Charlie4a DNA MER1_type 1 91 -1870 4989 114 23 7 chr17 56070748 56070770 -33433783 - L1MA2 LINE L1 0 6304 6284 180 0 0 0 chr17 56070770 56070790 -33433763 + (TG)n Simple_repeat Simple_repeat 2 21 0 4989 114 23 7 chr17 56070790 56071492 -33433061 - L1MA2 LINE L1 -20 6284 5568 1077 184 65 73 chr17 56071492 56071840 -33432713 + Charlie4a DNA MER1_type 91 492 -16 502 258 18 42 chr17 56071858 56072025 -33432528 + MLT1J2 LTR MaLR 282 444 -6 944 152 103 0 chr17 56072229 56072394 -33432159 + MER58A DNA MER1_type 43 224 0 272 119 0 0 chr17 56072784 56072826 -33431727 - MIR SINE MIR -118 144 103 271 303 40 71 chr17 56072837 56072936 -33431617 - MIR SINE MIR -133 129 34 335 264 0 0 chr17 56073101 56073173 -33431380 + MIR SINE MIR 66 137 -71 299 301 75 38 chr17 56073440 56073573 -33430980 - MIR3 SINE MIR -49 159 22 557 317 29 25 chr17 56073683 56073926 -33430627 + MIR SINE MIR 18 261 -1 315 153 0 54 chr17 56074850 56074961 -33429592 + (TCTCTG)n Simple_repeat Simple_repeat 4 108 0 643 263 145 0 chr17 56074969 56075155 -33429398 - MIR SINE MIR -18 244 32 214 250 0 0 chr17 56075292 56075332 -33429221 + L2 LINE L2 3227 3266 -6 21 0 0 0 chr17 56075393 56075414 -33429139 + GC_rich Low_complexity Low_complexity 1 21 0 193 271 129 0 chr17 56075476 56075546 -33429007 - L3b LINE CR1 -189 1394 1316 572 242 37 79 chr17 56075613 56075803 -33428750 + MIR SINE MIR 20 201 -61 856 93 0 14 chr17 56075992 56076131 -33428422 + (TCCC)n Simple_repeat Simple_repeat 1 137 0 215 291 68 58 chr17 56076161 56076264 -33428289 - L2 LINE L2 -33 3239 3136 1401 265 46 8 chr17 56076349 56076741 -33427812 + L2 LINE L2 2447 2853 -461 536 259 60 36 chr17 56076779 56076945 -33427608 + MIR SINE MIR 15 184 -24 512 272 142 101 chr17 56076931 56077129 -33427424 + L2 LINE L2 2856 3044 -269 * 1913 139 30 0 chr17 56077129 56077432 -33427121 + AluSx SINE Alu 1 312 0 512 272 142 101 chr17 56077432 56077670 -33426883 + L2 LINE L2 3044 3310 -3 264 381 79 25 chr17 56077671 56077873 -33426680 - L2 LINE L2 -163 3109 2897 492 283 75 31 chr17 56078921 56079147 -33425406 + L2 LINE L2 3077 3312 -1 713 155 12 43 chr17 56079474 56079635 -33424918 + MER96B DNA MER1_type? 101 256 -161 1242 248 67 40 chr17 56079856 56080332 -33424221 + Tigger8 DNA MER2_type 95 583 -83 888 202 22 53 chr17 56080355 56080583 -33423970 - MIR SINE MIR -27 235 15 789 247 51 12 chr17 56081586 56081841 -33422712 + LTR33 LTR ERVL 20 284 -237 388 244 47 0 chr17 56081889 56082016 -33422537 + LTR33 LTR ERVL 389 521 0 262 210 0 32 chr17 56082253 56082315 -33422238 + MER103 DNA DNA 63 122 -44 414 57 0 0 chr17 56082315 56082368 -33422185 + (CA)n Simple_repeat Simple_repeat 2 54 0 363 171 98 0 chr17 56082373 56082455 -33422098 - HsTC2 DNA Tc2 -1807 91 2 1651 236 71 16 chr17 56082731 56083154 -33421399 + MLT1J1 LTR MaLR 1 446 0 248 340 46 33 chr17 56083389 56083542 -33421011 + L2 LINE L2 3159 3313 0 331 211 266 0 chr17 56083808 56083936 -33420617 + MIR SINE MIR 98 259 -3 626 225 165 11 chr17 56084001 56084183 -33420370 + MER58C DNA MER1_type 6 215 0 373 311 90 22 chr17 56084585 56084807 -33419746 - MIR SINE MIR -6 256 20 2458 94 0 0 chr17 56084904 56085213 -33419340 + AluSc SINE Alu 1 309 0 180 125 0 0 chr17 56085346 56085378 -33419175 + (TC)n Simple_repeat Simple_repeat 1 32 0 189 294 0 0 chr17 56085422 56085473 -33419080 + MIR3 SINE MIR 157 207 -1 239 338 93 33 chr17 56085768 56085919 -33418634 + LTR67 LTR ERVL 2 161 -396 452 38 0 0 chr17 56085921 56085974 -33418579 - MADE1 DNA Mariner -26 54 2 407 283 45 51 chr17 56086171 56086348 -33418205 + LTR67 LTR ERVL 376 551 -6 328 276 95 95 chr17 56086383 56086655 -33417898 - MLT1L LTR MaLR -82 533 259 585 0 0 0 chr17 56086655 56086720 -33417833 + (CAG)n Simple_repeat Simple_repeat 2 66 0 328 276 95 95 chr17 56086720 56086846 -33417707 - MLT1L LTR MaLR -355 260 135 503 195 195 11 chr17 56087086 56087260 -33417293 + MIR SINE MIR 47 252 -10 508 307 137 32 chr17 56087643 56087985 -33416568 + L3 LINE CR1 1199 1576 -1 350 316 53 0 chr17 56089673 56089806 -33414747 + MIR SINE MIR 49 188 -74 209 224 75 45 chr17 56090660 56090727 -33413826 - MIR SINE MIR 0 262 194 363 78 0 0 chr17 56092067 56092118 -33412435 + (CA)n Simple_repeat Simple_repeat 2 52 0 260 344 44 27 chr17 56092413 56092596 -33411957 - MIR SINE MIR -71 191 6 22 35 0 0 chr17 56092761 56092790 -33411763 + AT_rich Low_complexity Low_complexity 1 29 0 204 400 14 29 chr17 56093125 56093265 -33411288 - MIR3 SINE MIR -68 140 3 381 339 0 31 chr17 56093929 56094059 -33410494 + L2 LINE L2 3141 3266 -6 2470 60 0 28 chr17 56094198 56094517 -33410036 + AluY SINE Alu 1 310 -1 305 291 67 15 chr17 56094859 56094993 -33409560 - MIR SINE MIR -8 254 114 429 320 78 7 chr17 56095006 56095159 -33409394 + MIR SINE MIR 3 166 -96 342 0 0 0 chr17 56095466 56095504 -33409049 + (CA)n Simple_repeat Simple_repeat 2 39 0 280 202 20 91 chr17 56095593 56095692 -33408861 - L2 LINE L2 -918 2396 2305 515 348 94 12 chr17 56096868 56097207 -33407346 - MLT1L LTR MaLR -248 367 1 28 61 0 0 chr17 56099406 56099455 -33405098 + AT_rich Low_complexity Low_complexity 1 49 0 559 185 193 0 chr17 56099681 56099800 -33404753 + MLT1F LTR MaLR 1 142 -425 1686 197 82 13 chr17 56099848 56100238 -33404315 + MLT1C LTR MaLR 51 467 0 735 171 42 29 chr17 56100245 56100572 -33403981 + MLT1F LTR MaLR 144 542 0 568 233 239 0 chr17 56101440 56101603 -33402950 - MIR SINE MIR -41 221 20 362 228 138 66 chr17 56102504 56102671 -33401882 + MER104 DNA MER2_type 2 180 0 1377 174 180 9 chr17 56103000 56103345 -33401208 + MER96B DNA MER1_type? 1 404 -13 184 231 15 62 chr17 56103429 56103494 -33401059 - L2 LINE L2 -14 3299 3238 1550 179 11 7 chr17 56103752 56104025 -33400528 + AluJo SINE Alu 1 274 -38 399 202 0 0 chr17 56104053 56104162 -33400391 + (TA)n Simple_repeat Simple_repeat 1 109 0 249 244 0 0 chr17 56104162 56104252 -33400301 + L1MC4 LINE L1 6614 6703 -1339 312 186 0 17 chr17 56104308 56104367 -33400186 + L2 LINE L2 3209 3266 -6 306 292 26 12 chr17 56104482 56104578 -33399975 + MIR SINE MIR 33 130 -78 416 279 58 13 chr17 56105494 56105648 -33398905 - MIR SINE MIR -27 235 75 379 325 97 0 chr17 56105655 56105769 -33398784 + L2 LINE L2 3148 3272 0 270 301 21 32 chr17 56106074 56106167 -33398386 + MIR SINE MIR 19 110 -98 633 241 188 14 chr17 56106338 56106545 -33398008 + MIR SINE MIR 20 262 0 25 51 0 0 chr17 56106545 56106584 -33397969 + AT_rich Low_complexity Low_complexity 1 39 0 220 320 100 10 chr17 56106631 56106731 -33397822 + L2 LINE L2 3160 3268 -4 354 217 203 97 chr17 56107395 56107612 -33396941 - MIR SINE MIR -10 252 13 * 413 340 41 33 chr17 56107602 56107846 -33396707 + MIR SINE MIR 17 262 0 23 54 0 0 chr17 56108107 56108144 -33396409 + AT_rich Low_complexity Low_complexity 1 37 0 2192 111 88 20 chr17 56108629 56108980 -33395573 + THE1C LTR MaLR 1 375 0 472 298 68 6 chr17 56109815 56109976 -33394577 - MIR SINE MIR -21 241 71 419 298 120 40 chr17 56110053 56110278 -33394275 + MIR SINE MIR 20 262 0 365 219 143 0 chr17 56110342 56110447 -33394106 - MER104 DNA Tc2 -29 151 32 305 333 55 6 chr17 56110849 56111014 -33393539 + MIR3 SINE MIR 15 187 -21 297 0 0 0 chr17 56111349 56111382 -33393171 + (CAA)n Simple_repeat Simple_repeat 2 34 0 369 317 166 0 chr17 56112150 56112349 -33392204 - MIR SINE MIR -10 252 21 669 316 57 8 chr17 56113816 56114060 -33390493 + MIR SINE MIR 5 260 -2 531 285 30 23 chr17 56114576 56114751 -33389802 + MIR SINE MIR 36 210 -52 916 206 184 37 chr17 56115998 56116324 -33388229 + LTR50 LTR ERVL 3 376 -419 340 374 31 0 chr17 56117099 56117262 -33387291 + L3 LINE CR1 1314 1481 -96 844 215 40 78 chr17 56117586 56117990 -33386563 - MLT1A2 LTR MaLR -8 382 1 286 314 57 8 chr17 56118017 56118141 -33386412 + MIR SINE MIR 69 198 -64 228 354 49 21 chr17 56118238 56118382 -33386171 + L2 LINE L2 2927 3074 -198 946 257 72 104 chr17 56118506 56119121 -33385432 - MER21B LTR ERV1 -169 694 100 488 227 0 84 chr17 56119096 56119250 -33385303 - MER77 LTR ERV1 -408 197 57 * 231 324 0 14 chr17 56119271 56119342 -33385211 + L2 LINE L2 3242 3311 -2 326 258 0 0 chr17 56119908 56119970 -33384583 - L2 LINE L2 -9 3263 3202 833 254 63 46 chr17 56120080 56120383 -33384170 + L2 LINE L2 3005 3312 -1 391 319 78 37 chr17 56120594 56120785 -33383768 - MIR SINE MIR -62 200 2 550 321 51 21 chr17 56122354 56122591 -33381962 + MIR SINE MIR 1 244 -18 351 0 0 0 chr17 56123045 56123084 -33381469 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 0 0 0 chr17 56124067 56124092 -33380461 + AT_rich Low_complexity Low_complexity 1 25 0 264 330 17 52 chr17 56124293 56124408 -33380145 + MIR SINE MIR 20 130 -78 738 188 0 8 chr17 56124615 56124743 -33379810 + FLAM_C SINE Alu 1 127 -16 244 253 13 27 chr17 56125982 56126038 -33378515 + CT-rich Low_complexity Low_complexity 3 58 -18 2150 110 0 47 chr17 56126038 56126214 -33378339 - AluSx SINE Alu -4 308 125 207 0 0 0 chr17 56126214 56126237 -33378316 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 2116 79 14 41 chr17 56126237 56126527 -33378026 - AluSq SINE Alu -31 282 1 2150 110 0 47 chr17 56126527 56126667 -33377886 - AluSx SINE Alu -185 127 6 244 253 13 27 chr17 56126667 56126685 -33377868 + CT-rich Low_complexity Low_complexity 58 76 0 199 297 93 34 chr17 56126992 56127110 -33377443 - L2 LINE L2 -231 3041 2917 662 259 46 15 chr17 56127633 56127830 -33376723 - MER63A DNA MER1_type 0 210 8 582 296 49 21 chr17 56128033 56128248 -33376305 + MIR SINE MIR 36 253 -9 250 306 18 54 chr17 56128246 56128357 -33376196 + MIR SINE MIR 34 140 -68 * 183 42 0 0 chr17 56129376 56129400 -33375153 + (A)n Simple_repeat Simple_repeat 1 24 0 1377 170 30 113 chr17 56129928 56130298 -33374255 - AluJo SINE Alu 0 343 1 21 89 0 0 chr17 56130620 56130676 -33373877 + AT_rich Low_complexity Low_complexity 1 56 0 1390 258 63 7 chr17 56130683 56131141 -33373412 - L1MD2 LINE L1 -221 6138 5655 1942 134 6 50 chr17 56131148 56131468 -33373085 - AluJb SINE Alu -5 307 2 760 207 50 0 chr17 56131502 56131681 -33372872 - MER20 DNA MER1_type -24 195 8 634 275 16 10 chr17 56131713 56131906 -33372647 - L1MD2 LINE L1 -515 5651 5458 617 320 55 30 chr17 56131948 56132313 -33372240 + MLT1I LTR MaLR 2 375 -34 2407 100 0 0 chr17 56132850 56133161 -33371392 + AluY SINE Alu 1 311 0 217 261 45 40 chr17 56133179 56133332 -33371221 - MER5B DNA MER1_type 0 189 1 207 330 21 0 chr17 56133506 56133600 -33370953 + MIR3 SINE MIR 61 156 -52 376 272 0 0 chr17 56133827 56133919 -33370634 + L1MC4 LINE L1 6614 6705 -1337 225 175 0 0 chr17 56134254 56134294 -33370259 - L1ME LINE L1 -460 5661 5622 1279 199 43 23 chr17 56134872 56135293 -33369260 + MER74A LTR ERVL 1 476 -82 1808 166 17 0 chr17 56135293 56135589 -33368964 - AluJo SINE Alu -11 301 1 1279 199 43 23 chr17 56135589 56135644 -33368909 + MER74A LTR ERVL 476 528 -30 2526 49 0 13 chr17 56135942 56136249 -33368304 + AluY SINE Alu 1 303 -8 606 295 71 42 chr17 56136530 56137029 -33367524 + L1MC/D LINE L1 5258 5771 -387 204 97 0 0 chr17 56137055 56137086 -33367467 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr17 56137195 56137217 -33367336 + AT_rich Low_complexity Low_complexity 1 22 0 3157 283 129 22 chr17 56138221 56139633 -33364920 + L2 LINE L2 1600 3177 -136 1538 215 51 62 chr17 56139633 56140102 -33364451 - MLT1C LTR MaLR -3 464 1 3157 283 129 22 chr17 56140102 56140256 -33364297 + L2 LINE L2 3177 3313 0 223 315 14 98 chr17 56140681 56140824 -33363729 + L2 LINE L2 3141 3271 -1 195 372 40 20 chr17 56141372 56141520 -33363033 + MER5A DNA MER1_type 38 188 -1 2042 241 16 40 chr17 56141575 56142143 -33362410 + MLT2B3 LTR ERVL 1 554 0 445 285 58 29 chr17 56142485 56142657 -33361896 + MIR SINE MIR 20 196 -66 325 106 0 0 chr17 56142668 56142715 -33361838 + Alu SINE Alu 1 47 -253 1906 96 0 111 chr17 56142717 56143041 -33361512 + AluSg1 SINE Alu 21 308 -1 225 196 0 0 chr17 56143179 56143230 -33361323 + GA-rich Low_complexity Low_complexity 2 52 0 795 263 109 55 chr17 56143765 56144222 -33360331 - MLT1H1 LTR MaLR 0 555 74 1623 209 7 7 chr17 56144227 56144524 -33360029 + AluJb SINE Alu 1 297 -15 204 67 0 0 chr17 56144524 56144554 -33359999 + (CAAAC)n Simple_repeat Simple_repeat 5 34 0 296 221 0 15 chr17 56144587 56144655 -33359898 - MLT1H1 LTR MaLR -473 69 3 196 255 143 51 chr17 56144996 56145094 -33359459 + MIR3 SINE MIR 89 195 -13 221 315 146 0 chr17 56145352 56145441 -33359112 + MIR SINE MIR 95 196 -66 248 256 78 22 chr17 56145691 56145781 -33358772 - L2 LINE L2 -12 3301 3207 601 259 127 48 chr17 56146591 56146962 -33357591 - MLT1J LTR MaLR -21 490 91 293 277 46 54 chr17 56147135 56147265 -33357288 - MIR3 SINE MIR -73 135 7 228 379 10 10 chr17 56147426 56147529 -33357024 + MIR SINE MIR 30 132 -76 235 273 104 13 chr17 56147755 56147832 -33356721 + MLT1J LTR MaLR 239 322 -189 189 196 0 0 chr17 56148038 56148084 -33356469 + (TTA)n Simple_repeat Simple_repeat 3 48 0 922 141 13 0 chr17 56149622 56149778 -33354775 + MLT1D LTR MaLR 348 505 0 220 277 138 46 chr17 56150087 56150217 -33354336 - MIR SINE MIR -74 188 47 308 307 97 11 chr17 56150257 56150433 -33354120 + HAL1 LINE L1 1494 1684 -823 22 80 0 0 chr17 56150887 56150937 -33353616 + AT_rich Low_complexity Low_complexity 1 50 0 231 163 0 0 chr17 56151024 56151067 -33353486 - L1ME3 LINE L1 -4 6158 6116 15479 198 27 6 chr17 56151069 56156601 -33347952 - L1PA15 LINE L1 -1 6815 1170 488 123 0 0 chr17 56156643 56156708 -33347845 + AluS SINE Alu 227 291 -21 269 276 84 53 chr17 56157411 56157580 -33346973 - MIR SINE MIR -63 145 21 331 271 91 52 chr17 56157964 56158174 -33346379 - L2 LINE L2 0 3313 3096 471 222 0 0 chr17 56159059 56159149 -33345404 + MER81 DNA DNA 2 91 -23 224 286 39 26 chr17 56159849 56159926 -33344627 + MIR SINE MIR 48 125 -137 229 218 184 35 chr17 56160294 56160381 -33344172 + MIR SINE MIR 158 257 -5 3107 300 121 42 chr17 56160453 56162477 -33342076 + L2 LINE L2 991 3179 -134 722 276 69 21 chr17 56162507 56162797 -33341756 + LTR16A LTR ERVL 22 325 -125 544 295 0 0 chr17 56162900 56163029 -33341524 + L2 LINE L2 3185 3313 0 231 297 46 57 chr17 56166103 56166278 -33338275 + MLT1I LTR MaLR 188 360 -49 220 292 83 0 chr17 56166861 56166933 -33337620 - L2 LINE L2 -9 3304 3227 320 278 159 0 chr17 56167244 56167370 -33337183 - MIR SINE MIR -28 234 89 506 329 143 0 chr17 56169753 56169963 -33334590 + MIR SINE MIR 17 256 -6 204 279 38 89 chr17 56170031 56170110 -33334443 - L2 LINE L2 -5 3308 3234 25 31 0 0 chr17 56170536 56170568 -33333985 + AT_rich Low_complexity Low_complexity 1 32 0 2359 131 40 3 chr17 56171348 56171699 -33332854 + THE1B LTR MaLR 1 364 0 716 250 20 15 chr17 56172081 56172285 -33332268 + MER63A DNA MER1_type 6 210 0 570 235 44 38 chr17 56172390 56172424 -33332129 + LTR16A1 LTR ERVL 248 280 -177 2283 186 34 0 chr17 56172424 56172838 -33331715 - MSTA LTR MaLR 0 428 1 570 235 44 38 chr17 56172838 56172986 -33331567 + LTR16A1 LTR ERVL 280 431 -26 31 0 0 0 chr17 56174144 56174175 -33330378 + AT_rich Low_complexity Low_complexity 1 31 0 2253 93 0 7 chr17 56174648 56174939 -33329614 - AluSg SINE Alu -21 289 1 23 0 0 0 chr17 56175094 56175117 -33329436 + AT_rich Low_complexity Low_complexity 1 23 0 330 307 34 17 chr17 56175287 56175463 -33329090 + GA-rich Low_complexity Low_complexity 1 179 0 517 349 133 35 chr17 56176162 56176793 -33327760 - L3 LINE CR1 -1 1576 884 392 238 0 30 chr17 56177117 56177218 -33327335 - MIR SINE MIR -62 200 103 284 288 108 0 chr17 56179491 56179602 -33324951 + LTR33 LTR ERVL 1 123 -398 670 213 0 8 chr17 56180054 56180176 -33324377 - FLAM_A SINE Alu -12 121 1 3826 166 12 18 chr17 56180334 56181071 -33323482 + L1MB4 LINE L1 5406 6138 -42 2012 212 78 17 chr17 56181419 56181891 -33322662 - MLT1D LTR MaLR -4 501 1 1234 155 36 20 chr17 56183024 56183276 -33321277 - MER46B DNA MER2_type 0 236 106 243 293 20 76 chr17 56184396 56184594 -33319959 + L2 LINE L2 2807 2993 -279 189 107 0 0 chr17 56187674 56187702 -33316851 + (GGA)n Simple_repeat Simple_repeat 1 28 0 2347 171 31 39 chr17 56188118 56188627 -33315926 + MLT1D LTR MaLR 1 505 0 314 289 42 63 chr17 56189161 56189351 -33315202 - MIR3 SINE MIR -8 200 15 256 200 17 17 chr17 56191081 56191141 -33313412 - L2 LINE L2 -4 3268 3209 604 301 75 46 chr17 56191145 56191730 -33312823 - L2 LINE L2 -5 3308 2709 275 273 109 31 chr17 56193124 56193252 -33311301 + MIR SINE MIR 117 254 -8 459 320 149 0 chr17 56193737 56193912 -33310641 - MIR SINE MIR -14 248 48 217 219 0 0 chr17 56194094 56194135 -33310418 + (CATA)n Simple_repeat Simple_repeat 3 43 0 630 296 70 44 chr17 56194177 56195294 -33309259 - L1MC4a LINE L1 -751 5395 4737 423 250 9 127 chr17 56195557 56195769 -33308784 - MIR SINE MIR -73 189 3 230 275 21 84 chr17 56195769 56195866 -33308687 + MIR SINE MIR 77 164 -98 567 241 80 30 chr17 56196005 56196189 -33308364 - MIR SINE MIR -55 153 7 185 370 0 25 chr17 56197832 56197913 -33306640 + L2 LINE L2 3225 3303 -10 183 100 0 0 chr17 56197914 56197944 -33306609 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 345 301 38 23 chr17 56198612 56198745 -33305808 - MER5A DNA MER1_type -37 152 18 392 252 14 29 chr17 56199461 56199600 -33304953 + L1ME4a LINE L1 5680 5816 -305 228 264 149 8 chr17 56199672 56199793 -33304760 + L1ME4a LINE L1 5978 6115 -6 1941 133 42 18 chr17 56200962 56201345 -33303208 + L1MA8 LINE L1 5815 6206 -85 207 0 0 0 chr17 56202212 56202235 -33302318 + (A)n Simple_repeat Simple_repeat 1 23 0 595 252 200 29 chr17 56203160 56203789 -33300764 + LTR50 LTR ERVL 23 795 0 253 252 49 24 chr17 56204875 56204998 -33299555 - Charlie7 DNA MER1_type 0 2612 2487 725 280 153 13 chr17 56205051 56205272 -33299281 + L2 LINE L2 2857 3046 -267 1460 262 62 14 chr17 56205272 56205769 -33298784 + LTR33 LTR ERVL 1 521 0 725 280 153 13 chr17 56205769 56205926 -33298627 + L2 LINE L2 3046 3288 -25 227 204 0 0 chr17 56205951 56205995 -33298558 - Charlie7 DNA MER1_type -2534 78 35 500 129 24 0 chr17 56207196 56207281 -33297272 - MLT1C LTR MaLR 0 467 381 475 174 0 31 chr17 56207296 56207394 -33297159 - MLT1C LTR MaLR -353 114 20 833 145 0 58 chr17 56207416 56207554 -33296999 + FRAM SINE Alu 29 158 -18 535 226 0 0 chr17 56207956 56208049 -33296504 - AluJ/FLAM SINE Alu -219 93 1 322 136 51 0 chr17 56208062 56208121 -33296432 + LTR41 LTR ERVL 706 767 -6 333 288 53 8 chr17 56208143 56208407 -33296146 - L1M4 LINE L1 -1118 5028 4753 314 234 73 32 chr17 56208701 56208825 -33295728 - L1M4 LINE L1 -1693 4453 4325 213 279 135 19 chr17 56208994 56209098 -33295455 - MIR SINE MIR -50 212 97 241 262 79 71 chr17 56209117 56209243 -33295310 - MIR SINE MIR -66 142 16 223 322 146 56 chr17 56210400 56210667 -33293886 + L2 LINE L2 2827 3117 -155 1964 68 0 0 chr17 56210735 56210986 -33293567 + L1PA8 LINE L1 5913 6163 -9 325 169 0 0 chr17 56210986 56211041 -33293512 - L1MD3 LINE L1 -17 7978 7921 294 329 61 102 chr17 56212717 56213128 -33291425 + L2 LINE L2 2873 3266 -6 396 0 0 0 chr17 56214270 56214314 -33290239 + (TG)n Simple_repeat Simple_repeat 1 44 0 316 309 161 31 chr17 56214423 56214585 -33289968 + L1ME LINE L1 272 454 -5616 243 88 0 0 chr17 56214787 56214821 -33289732 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 1298 242 141 27 chr17 56214830 56215686 -33288867 + L1ME LINE L1 543 1496 -4584 488 239 31 0 chr17 56215666 56215829 -33288724 + L1ME LINE L1 2725 2892 -3188 * 737 214 115 64 chr17 56215830 56216143 -33288410 + MLT2C1 LTR ERVL 2 330 -67 390 21 0 0 chr17 56216168 56216215 -33288338 + (CA)n Simple_repeat Simple_repeat 2 48 0 920 240 47 52 chr17 56216248 56216743 -33287810 + L1ME LINE L1 2891 3382 -2698 12528 205 26 11 chr17 56216753 56222841 -33281712 + L1PA16 LINE L1 734 6869 0 340 231 240 24 chr17 56222864 56223072 -33281481 + MLT1E2 LTR MaLR 11 263 -363 * 1911 215 61 48 chr17 56223068 56223715 -33280838 + L1ME1 LINE L1 5513 6163 -3 489 274 134 31 chr17 56224222 56224445 -33280108 - MIR SINE MIR -15 247 2 243 269 0 0 chr17 56224661 56224713 -33279840 - L2 LINE L2 -17 3296 3245 23 0 0 0 chr17 56224833 56224856 -33279697 + AT_rich Low_complexity Low_complexity 1 23 0 37 62 0 0 chr17 56226814 56226879 -33277674 + AT_rich Low_complexity Low_complexity 1 65 0 476 299 143 58 chr17 56228074 56229091 -33275462 + L1ME2 LINE L1 45 1253 -5143 2358 78 0 10 chr17 56229091 56229397 -33275156 + AluSc SINE Alu 1 303 -6 476 299 143 58 chr17 56229397 56230010 -33274543 + L1ME2 LINE L1 1253 1813 -4583 448 247 29 121 chr17 56230032 56230380 -33274173 + L1ME2 LINE L1 2007 2322 -4074 1919 121 11 3 chr17 56230384 56230695 -33273858 + AluSx SINE Alu 1 313 0 1060 145 0 43 chr17 56230695 56230881 -33273672 + AluSg/x SINE Alu 128 305 -7 5913 279 89 18 chr17 56230882 56233354 -33271199 + L1ME2 LINE L1 2278 4971 -1244 414 69 0 0 chr17 56233354 56233412 -33271141 + (TG)n Simple_repeat Simple_repeat 1 58 0 5913 279 89 18 chr17 56233412 56233714 -33270839 + L1ME2 LINE L1 4971 5250 -965 1157 229 67 31 chr17 56233874 56234201 -33270352 - MER88 LTR ERVL -125 339 1 364 134 24 49 chr17 56234206 56234288 -33270265 + L1ME2 LINE L1 5262 5341 -874 1757 121 18 0 chr17 56234318 56234590 -33269963 - L1PA14 LINE L1 -2 6159 5883 4086 135 20 18 chr17 56234756 56235858 -33268695 - L1PA14 LINE L1 -262 5899 4801 3004 261 22 7 chr17 56235855 56236666 -33267887 + L1ME2 LINE L1 5404 6226 -7 * 244 339 63 31 chr17 56237727 56237854 -33266699 + L2 LINE L2 3108 3238 -34 10846 175 13 14 chr17 56239214 56242522 -33262031 + L1PB1 LINE L1 2849 6151 0 233 200 0 0 chr17 56242577 56242622 -33261931 - L2 LINE L2 -4 3309 3265 1079 152 33 0 chr17 56242798 56243009 -33261544 + L1MCa LINE L1 1770 1987 -4439 940 139 70 11 chr17 56243027 56243214 -33261339 + L1MCa LINE L1 2056 2253 -4173 207 275 58 14 chr17 56243218 56243287 -33261266 - L2 LINE L2 -937 2377 2306 380 246 16 8 chr17 56243289 56243411 -33261142 - L2 LINE L2 -1204 2110 1988 266 274 37 15 chr17 56243455 56243590 -33260963 + L1ME4a LINE L1 5984 6121 0 1170 159 152 4 chr17 56243741 56244018 -33260535 - MER33 DNA MER1_type -3 321 4 378 295 29 9 chr17 56244032 56244137 -33260416 + MER5A DNA MER1_type 6 112 -77 2059 82 16 13 chr17 56244146 56244449 -33260104 - L1PA13 LINE L1 0 6163 5860 1838 82 4 0 chr17 56244449 56244694 -33259859 + L1PA12 LINE L1 5652 5897 -271 272 210 32 16 chr17 56244694 56244756 -33259797 - MER5A DNA MER1_type -118 71 9 673 219 7 7 chr17 56244911 56245048 -33259505 - MIR SINE MIR -111 151 15 238 240 59 36 chr17 56245958 56246100 -33258453 + MIR SINE MIR 41 187 -21 223 303 67 34 chr17 56246425 56246514 -33258039 + L2 LINE L2 3169 3260 -12 2151 111 3 0 chr17 56246515 56246813 -33257740 + AluSp SINE Alu 1 299 -14 247 320 102 14 chr17 56247339 56247486 -33257067 + L2 LINE L2 3154 3313 0 250 365 55 69 chr17 56248862 56249136 -33255417 - L2 LINE L2 -20 3252 2983 280 288 0 0 chr17 56249371 56249437 -33255116 + MIR SINE MIR 86 151 -57 21 0 0 0 chr17 56249713 56249734 -33254819 + AT_rich Low_complexity Low_complexity 1 21 0 222 391 113 7 chr17 56251033 56251184 -33253369 - L2 LINE L2 -20 3252 3086 21 0 0 0 chr17 56251408 56251429 -33253124 + AT_rich Low_complexity Low_complexity 1 21 0 333 291 107 65 chr17 56252057 56252366 -33252187 + L2 LINE L2 2988 3309 -4 1867 278 77 18 chr17 56254324 56254933 -33249620 + MLT2F LTR ERVL 12 656 -7 187 359 58 10 chr17 56255378 56255481 -33249072 + MIR SINE MIR 154 261 -1 224 341 111 9 chr17 56255522 56255661 -33248892 - MIR SINE MIR -71 191 40 446 175 103 71 chr17 56255698 56255824 -33248729 - MIR SINE MIR -31 231 102 305 287 82 8 chr17 56255917 56256039 -33248514 + MIR SINE MIR 112 242 -20 896 215 87 0 chr17 56256103 56256298 -33248255 + MER58C DNA MER1_type 1 212 -3 580 60 0 24 chr17 56257121 56257205 -33247348 + L1PA5 LINE L1 6073 6154 0 293 278 139 35 chr17 56257811 56257955 -33246598 - MIR SINE MIR -101 161 3 252 333 65 111 chr17 56258104 56258518 -33246035 + L2 LINE L2 2878 3272 0 23 54 0 0 chr17 56260199 56260236 -33244317 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr17 56261283 56261310 -33243243 + AT_rich Low_complexity Low_complexity 1 27 0 798 304 78 45 chr17 56262008 56262787 -33241766 - L1M4 LINE L1 -1754 4392 3588 371 259 131 57 chr17 56262891 56263173 -33241380 - L1M4 LINE L1 -2705 3441 3139 279 265 108 12 chr17 56263902 56263985 -33240568 + L2 LINE L2 3149 3239 -33 5537 114 11 24 chr17 56264707 56265714 -33238839 + L1PB1 LINE L1 5109 6099 -52 21 0 0 0 chr17 56265754 56265775 -33238778 + AT_rich Low_complexity Low_complexity 1 21 0 233 303 101 0 chr17 56266008 56266097 -33238456 + MIR SINE MIR 50 147 -115 270 258 109 55 chr17 56267066 56267194 -33237359 - MIR SINE MIR -24 238 104 367 305 68 0 chr17 56267217 56267335 -33237218 - MIR SINE MIR -74 188 63 319 308 75 9 chr17 56267489 56267596 -33236957 - MIR3 SINE MIR -11 197 84 276 259 71 83 chr17 56268064 56268596 -33235957 + L1ME3A LINE L1 586 1111 -5008 551 222 0 0 chr17 56268735 56268834 -33235719 + MER2 DNA MER2_type 1 99 -246 407 278 100 42 chr17 56269260 56269519 -33235034 + L1ME3A LINE L1 4762 5035 -1094 229 262 103 19 chr17 56269655 56269762 -33234791 + L1ME3A LINE L1 5189 5304 -825 229 286 105 15 chr17 56269729 56269862 -33234691 + L1P2 LINE L1 5297 5441 -696 276 259 108 0 chr17 56269901 56270040 -33234513 + L1ME3A LINE L1 5743 5896 -257 1945 176 44 60 chr17 56271430 56271618 -33232935 + MSTB LTR MaLR 1 191 -235 1847 184 0 0 chr17 56271618 56271912 -33232641 + AluSx SINE Alu 1 294 -18 1945 176 44 60 chr17 56271912 56272156 -33232397 + MSTB LTR MaLR 191 426 0 8476 192 34 8 chr17 56272156 56273765 -33230788 + MSTB-int LTR MaLR 1 1651 0 2221 187 26 5 chr17 56273766 56274183 -33230370 + MSTB LTR MaLR 1 426 0 431 220 7 93 chr17 56274565 56274715 -33229838 - L1ME3A LINE L1 -13 6157 6021 422 212 12 85 chr17 56274738 56274889 -33229664 - L1MEc LINE L1 -3216 3210 3070 252 86 0 0 chr17 56274889 56274924 -33229629 + (TA)n Simple_repeat Simple_repeat 2 36 0 422 212 12 85 chr17 56274924 56274937 -33229616 - L1MEc LINE L1 -3356 3070 3058 774 231 30 0 chr17 56274958 56275192 -33229361 - L1MEc LINE L1 -3568 2858 2618 293 269 11 7 chr17 56275495 56275635 -33228918 - L1MEc LINE L1 -4635 1876 1684 2447 149 16 5 chr17 56275639 56276068 -33228485 - L1PA16 LINE L1 -5 6161 5728 378 71 0 0 chr17 56276068 56276118 -33228435 + L1PA16 LINE L1 6106 6161 -5 2074 140 22 3 chr17 56276191 56276549 -33228004 - L1PA16 LINE L1 -406 5760 5396 7912 208 10 39 chr17 56276594 56277024 -33227529 + L1 LINE L1 3191 3632 -2514 232 67 0 0 chr17 56277024 56277054 -33227499 + U2 snRNA snRNA 4 33 -155 7912 208 10 39 chr17 56277054 56278802 -33225751 + L1 LINE L1 3632 5334 -812 545 276 121 31 chr17 56278818 56279075 -33225478 - L1MEc LINE L1 -4883 1543 1264 284 317 62 7 chr17 56279682 56279827 -33224726 + MIR SINE MIR 109 261 -1 206 311 11 0 chr17 56279828 56279918 -33224635 + (ATG)n Simple_repeat Simple_repeat 3 93 0 321 205 13 26 chr17 56280017 56280095 -33224458 + Charlie3 DNA MER1_type 2587 2663 -47 255 208 21 10 chr17 56280918 56281014 -33223539 + (TA)n Simple_repeat Simple_repeat 1 97 0 3008 134 15 34 chr17 56281464 56281478 -33223075 - MER1A DNA MER1_type -2173 529 516 2513 120 11 11 chr17 56281478 56281853 -33222700 - THE1C LTR MaLR 0 375 1 3008 134 15 34 chr17 56281853 56282376 -33222177 - MER1A DNA MER1_type -2186 516 2 289 294 103 8 chr17 56282394 56282520 -33222033 + MIR3 SINE MIR 69 206 -2 341 188 79 69 chr17 56282748 56282849 -33221704 - MIR SINE MIR -96 166 65 188 233 58 47 chr17 56283022 56283108 -33221445 + MIR SINE MIR 119 205 -57 1934 219 61 47 chr17 56285528 56286066 -33218487 + MLT2B3 LTR ERVL 1 546 -8 2183 119 7 0 chr17 56286143 56286437 -33218116 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 56287270 56287290 -33217263 + (TTA)n Simple_repeat Simple_repeat 2 21 0 284 222 33 0 chr17 56287822 56287912 -33216641 + MER94 DNA DNA 2 94 -40 443 307 94 26 chr17 56288329 56288671 -33215882 + L1ME3A LINE L1 5556 5920 -250 318 137 0 0 chr17 56288739 56288790 -33215763 - L1M2 LINE L1 -566 5725 5675 2181 182 36 40 chr17 56288828 56289360 -33215193 + L1MA10 LINE L1 5801 6330 -4 462 247 124 39 chr17 56289582 56289760 -33214793 + MIR SINE MIR 23 215 -47 195 286 71 24 chr17 56289836 56289920 -33214633 - MIR3 SINE MIR -23 185 98 1761 207 114 91 chr17 56290007 56290854 -33213699 + LTR28 LTR ERV1 1 1020 0 229 194 0 119 chr17 56290887 56290954 -33213599 - MER58C DNA MER1_type -155 60 2 983 127 48 6 chr17 56290959 56291125 -33213428 - MER5A DNA MER1_type -1 188 16 434 311 146 50 chr17 56291304 56291606 -33212947 - L2 LINE L2 -35 3237 2907 672 265 61 5 chr17 56291621 56291817 -33212736 + MIR SINE MIR 56 262 0 200 309 99 31 chr17 56292270 56292432 -33212121 - L2 LINE L2 -1237 2077 1905 214 318 0 12 chr17 56292734 56292819 -33211734 + L2 LINE L2 2897 2980 -292 185 245 20 0 chr17 56293041 56293090 -33211463 + L2 LINE L2 3263 3312 -1 251 307 87 16 chr17 56293259 56293386 -33211167 - MIR SINE MIR -36 226 91 392 319 0 0 chr17 56293954 56294048 -33210505 + MIR3 SINE MIR 106 199 -9 531 367 131 12 chr17 56294599 56295079 -33209474 + L3 LINE CR1 966 1502 -75 222 118 0 0 chr17 56295113 56295147 -33209406 + (T)n Simple_repeat Simple_repeat 1 34 0 2156 282 36 25 chr17 56295448 56296409 -33208144 + L1ME1 LINE L1 35 1006 -5390 8440 183 25 17 chr17 56296420 56299289 -33205264 - L1MA9 LINE L1 -5 6307 3403 1957 166 0 0 chr17 56299289 56299591 -33204962 - AluJo SINE Alu -10 302 1 1270 280 65 30 chr17 56299606 56300567 -33203986 + L1ME1 LINE L1 996 1989 -4407 * 3083 248 83 24 chr17 56300564 56301948 -33202605 + L1ME1 LINE L1 2520 3985 -2230 1579 236 94 18 chr17 56301933 56302446 -33202107 + L1ME1 LINE L1 5680 6231 -4 * 21 0 0 0 chr17 56302702 56302723 -33201830 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 56303025 56303046 -33201507 + AT_rich Low_complexity Low_complexity 1 21 0 258 237 134 21 chr17 56303358 56303455 -33201098 - L2 LINE L2 -13 3300 3193 250 360 113 40 chr17 56303680 56304008 -33200545 - L2 LINE L2 -374 2940 2589 885 297 37 12 chr17 56304227 56304473 -33200080 + MIR SINE MIR 6 257 -5 1055 348 100 23 chr17 56304578 56304772 -33199781 + L2 LINE L2 2140 2318 -954 1802 193 8 23 chr17 56304772 56305124 -33199429 + MER7A DNA MER2_type 1 345 -1 1055 348 100 23 chr17 56305124 56305938 -33198615 + L2 LINE L2 2318 3230 -42 608 193 11 17 chr17 56305979 56306160 -33198393 + GA-rich Low_complexity Low_complexity 1 180 0 5702 107 25 7 chr17 56306180 56307274 -33197279 + L1PA13 LINE L1 5033 6144 -19 27 0 0 0 chr17 56307277 56307304 -33197249 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr17 56307615 56307640 -33196913 + AT_rich Low_complexity Low_complexity 1 25 0 257 147 0 15 chr17 56307896 56307964 -33196589 + (TG)n Simple_repeat Simple_repeat 1 67 0 676 248 86 126 chr17 56308271 56308679 -33195874 + HAL1 LINE L1 793 1175 -1332 7337 93 13 24 chr17 56308679 56309762 -33194791 + MER11C LTR ERVK 1 1071 0 676 248 86 126 chr17 56309762 56309910 -33194643 + HAL1 LINE L1 1175 1327 -1180 379 221 58 48 chr17 56309910 56310014 -33194539 - L2 LINE L2 0 3313 3209 314 322 55 31 chr17 56310036 56310328 -33194225 + HAL1 LINE L1 1385 1683 -824 1144 254 27 6 chr17 56311815 56312145 -33192408 - MER97b DNA MER1_type? -450 603 267 390 159 0 14 chr17 56312145 56312214 -33192339 + Tigger2 DNA MER2_type 1 68 -2650 * 2463 141 39 2 chr17 56312202 56312634 -33191919 + Tigger2 DNA MER2_type 2271 2718 0 1139 213 17 0 chr17 56312634 56312874 -33191679 - MER97b DNA MER1_type? -809 244 1 260 274 27 40 chr17 56313375 56313527 -33191026 - MIR SINE MIR -66 142 5 539 321 30 104 chr17 56313634 56313970 -33190583 + L2 LINE L2 2946 3256 -16 478 305 0 8 chr17 56314262 56314390 -33190163 - MIR3 SINE MIR -15 193 67 916 91 0 0 chr17 56314537 56314669 -33189884 + L1PA5 LINE L1 6020 6151 -3 1879 220 40 2 chr17 56315085 56315566 -33188987 + L1MD3 LINE L1 7492 7990 -5 1940 205 92 13 chr17 56316050 56316484 -33188069 + MLT1D LTR MaLR 12 485 -20 1808 144 57 38 chr17 56316484 56316852 -33187701 + THE1C LTR MaLR 1 375 0 1940 205 92 13 chr17 56316852 56316875 -33187678 + MLT1D LTR MaLR 485 505 0 1214 124 6 0 chr17 56317053 56317222 -33187331 - AluSq SINE Alu -10 303 134 4874 224 71 7 chr17 56317226 56318387 -33186166 + MSTB1-int LTR MaLR 402 1636 -15 2346 166 25 30 chr17 56318401 56318835 -33185718 + MSTB1 LTR MaLR 1 432 0 1913 241 131 2 chr17 56318835 56319386 -33185167 + MLT1E1 LTR MaLR 25 646 -8 354 256 73 81 chr17 56319933 56320179 -33184374 + L2 LINE L2 2731 2974 -340 1988 152 72 3 chr17 56320785 56321134 -33183419 + THE1C LTR MaLR 1 373 -2 9348 116 30 34 chr17 56321136 56321357 -33183196 + THE1B-int LTR MaLR 1 221 -1359 2323 122 37 6 chr17 56321357 56321710 -33182843 + THE1B LTR MaLR 1 364 0 9348 116 30 34 chr17 56321710 56323064 -33181489 + THE1B-int LTR MaLR 221 1570 -10 1916 144 33 27 chr17 56323079 56323446 -33181107 + THE1C LTR MaLR 7 375 0 497 286 82 10 chr17 56323586 56323782 -33180771 - MLT1L LTR MaLR -14 601 392 1946 181 35 10 chr17 56323844 56324248 -33180305 - MLT2D LTR ERVL 0 414 1 288 250 37 46 chr17 56324252 56324360 -33180193 - MLT1L LTR MaLR -418 197 91 236 391 93 13 chr17 56324541 56324692 -33179861 + L2 LINE L2 3101 3263 -9 468 347 25 17 chr17 56325338 56325577 -33178976 - MIR SINE MIR 0 262 22 272 228 43 33 chr17 56326332 56326424 -33178129 - MIR SINE MIR -104 158 66 21 36 0 0 chr17 56327268 56327296 -33177257 + AT_rich Low_complexity Low_complexity 1 28 0 416 19 19 0 chr17 56327663 56327716 -33176837 + (CA)n Simple_repeat Simple_repeat 1 54 0 276 217 0 43 chr17 56329128 56329220 -33175333 - MER20B DNA MER1_type -17 766 679 345 173 173 0 chr17 56329657 56329767 -33174786 - MER20B DNA MER1_type -108 675 547 1385 212 37 6 chr17 56329767 56330092 -33174461 + MER58B DNA MER1_type 1 335 -6 1507 269 110 13 chr17 56330137 56330736 -33173817 - MER20B DNA MER1_type -126 657 1 2130 197 46 54 chr17 56381837 56382483 -33122070 + L1ME3 LINE L1 5522 6162 0 182 376 101 0 chr17 56382930 56383039 -33121514 + MIR SINE MIR 22 141 -67 256 287 161 49 chr17 56384033 56384399 -33120154 - L1MC/D LINE L1 -2081 5727 5321 493 305 33 29 chr17 56384415 56384625 -33119928 - L3 LINE CR1 -114 1463 1253 216 200 0 0 chr17 56384625 56384675 -33119878 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 612 203 158 13 chr17 56385261 56385419 -33119134 - MER5A DNA MER1_type 0 189 9 219 346 33 46 chr17 56385491 56385644 -33118909 - L3 LINE CR1 -586 991 841 540 330 136 38 chr17 56385867 56386383 -33118170 - L2 LINE L2 0 3313 2749 1541 303 150 14 chr17 56386468 56387389 -33117164 - L2 LINE L2 -864 2450 1405 184 273 15 0 chr17 56387723 56387789 -33116764 + L2 LINE L2 2992 3058 -214 217 261 0 31 chr17 56388886 56388951 -33115602 + CT-rich Low_complexity Low_complexity 2 64 0 1089 255 54 6 chr17 56389467 56389781 -33114772 + MER93a LTR ERV1 74 402 0 316 308 82 27 chr17 56390051 56390197 -33114356 + MER5B DNA MER1_type 8 161 -17 521 219 30 83 chr17 56390907 56391076 -33113477 + MIR SINE MIR 11 170 -92 1767 160 0 38 chr17 56391187 56391500 -33113053 - AluJb SINE Alu -11 301 1 373 246 186 8 chr17 56391977 56392095 -33112458 - MER5B DNA MER1_type -9 169 31 229 250 73 29 chr17 56392126 56392194 -33112359 + MER5A DNA MER1_type 119 189 0 2158 79 45 7 chr17 56392248 56392538 -33112015 - AluY SINE Alu -10 301 1 430 299 138 6 chr17 56392538 56392712 -33111841 + MIR SINE MIR 54 250 -12 402 245 199 20 chr17 56392814 56392965 -33111588 + MIR SINE MIR 84 261 -1 432 73 37 0 chr17 56395151 56395233 -33109320 + (TA)n Simple_repeat Simple_repeat 2 86 0 1067 145 6 0 chr17 56395234 56395413 -33109140 + L1PB1 LINE L1 5794 5973 -178 2235 93 0 10 chr17 56395413 56395703 -33108850 + AluSg SINE Alu 1 287 -23 341 89 18 0 chr17 56395803 56395859 -33108694 + AluSc SINE Alu 243 299 0 970 163 11 11 chr17 56395866 56396056 -33108497 + L1PB1 LINE L1 5959 6148 -3 514 210 27 59 chr17 56396056 56396267 -33108286 + L1M4 LINE L1 4405 4610 -1536 219 302 9 85 chr17 56396802 56396908 -33107645 + L2 LINE L2 2490 2587 -727 226 256 139 12 chr17 56397469 56397555 -33106998 + MIR SINE MIR 31 127 -135 874 251 121 78 chr17 56397652 56398090 -33106463 - LTR16A1 LTR ERVL 0 457 1 749 242 15 10 chr17 56399475 56399673 -33104880 + MER58A DNA MER1_type 26 224 0 579 319 105 0 chr17 56399673 56399883 -33104670 + MIR SINE MIR 31 262 0 729 269 84 9 chr17 56401499 56401726 -33102827 + MIR SINE MIR 8 251 -11 24 32 0 0 chr17 56401938 56401969 -33102584 + AT_rich Low_complexity Low_complexity 1 31 0 2462 121 98 8 chr17 56402122 56402520 -33102033 + MER61C LTR ERV1 1 434 0 279 173 0 62 chr17 56402520 56402601 -33101952 + MER61C-int LTR ERV1 2 77 -7014 267 219 41 0 chr17 56402690 56402763 -33101790 + MER61C-int LTR ERV1 407 482 -6609 1357 159 28 75 chr17 56402808 56402987 -33101566 + MER61C-int LTR ERV1 181 367 -4850 2329 102 0 0 chr17 56402987 56403281 -33101272 + AluSc SINE Alu 1 294 -15 1357 159 28 75 chr17 56403281 56403596 -33100957 + MER61C-int LTR ERV1 367 4128 -1089 1336 192 14 18 chr17 56403594 56403875 -33100678 + MER61C-int LTR ERV1 4296 4575 -642 * 1549 106 4 0 chr17 56403877 56404103 -33100450 + MER61C-int LTR ERV1 2213 2439 -4979 * 10929 183 38 59 chr17 56404100 56407612 -33096941 + MER61C-int LTR ERV1 1213 5204 -13 2510 139 43 5 chr17 56407651 56408069 -33096484 + MER61C LTR ERV1 1 434 0 306 50 0 0 chr17 56408762 56408802 -33095751 + (CA)n Simple_repeat Simple_repeat 2 41 0 1395 207 13 39 chr17 56409295 56409677 -33094876 - MER96B DNA MER1_type? -45 372 1 423 92 0 0 chr17 56410426 56410491 -33094062 + (TG)n Simple_repeat Simple_repeat 2 66 0 276 234 206 19 chr17 56410786 56410893 -33093660 + L2 LINE L2 3187 3313 0 401 289 50 69 chr17 56411362 56411521 -33093032 - MIR SINE MIR -79 183 28 286 306 157 47 chr17 56411689 56411944 -33092609 + L2 LINE L2 2807 3089 -183 * 314 288 43 80 chr17 56411931 56412266 -33092287 + L2 LINE L2 2725 3053 -219 2145 135 18 29 chr17 56412376 56412760 -33091793 + LTR57 LTR ERVL 1 380 -31 186 103 0 0 chr17 56413028 56413057 -33091496 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 336 268 112 73 chr17 56413057 56413236 -33091317 - L2 LINE L2 -13 3300 3115 369 319 53 0 chr17 56414291 56414479 -33090074 - L1MC4a LINE L1 -1880 5928 5731 452 279 49 49 chr17 56415067 56415250 -33089303 - MIR SINE MIR -78 184 2 204 380 62 49 chr17 56415263 56415487 -33089066 + L2 LINE L2 3044 3270 -2 925 237 5 10 chr17 56416482 56416680 -33087873 - MIR SINE MIR -51 211 15 4086 153 31 6 chr17 56416933 56417782 -33086771 + L1MA8 LINE L1 5164 6028 -263 1087 158 0 0 chr17 56417788 56417952 -33086601 - FRAM SINE Alu -2 174 11 1357 121 40 4 chr17 56417952 56418200 -33086353 + L1MA8 LINE L1 6018 6274 -17 2897 55 0 33 chr17 56418888 56419287 -33085266 + L1PA3 LINE L1 5770 6155 0 31 0 0 0 chr17 56419294 56419325 -33085228 + AT_rich Low_complexity Low_complexity 1 31 0 232 264 39 30 chr17 56419451 56419589 -33084964 + MIR SINE MIR 1 220 -42 180 260 62 62 chr17 56420696 56420792 -33083761 + L2 LINE L2 2969 3064 -208 276 296 0 37 chr17 56420892 56420973 -33083580 + L2 LINE L2 3191 3268 -4 456 325 42 6 chr17 56421456 56421622 -33082931 + MIR SINE MIR 17 188 -74 379 335 33 61 chr17 56421888 56422153 -33082400 + L2 LINE L2 2380 2630 -684 4446 131 55 3 chr17 56422153 56422839 -33081714 + MER72 LTR ERV1 1 722 0 379 335 33 61 chr17 56422839 56423000 -33081553 + L2 LINE L2 2630 2794 -520 638 270 83 26 chr17 56424262 56424492 -33080061 + MIR SINE MIR 20 262 0 229 208 104 0 chr17 56424767 56424815 -33079738 + L2 LINE L2 3219 3271 -1 2093 176 47 7 chr17 56425056 56425465 -33079088 - MLT1D LTR MaLR 0 505 81 514 235 79 0 chr17 56426245 56426396 -33078157 + MIR SINE MIR 33 193 -65 500 261 113 10 chr17 56426403 56426598 -33077955 + MIR SINE MIR 11 225 -37 591 270 50 0 chr17 56426788 56426988 -33077565 + L1ME1 LINE L1 5953 6162 -4 1434 178 17 56 chr17 56427021 56427376 -33077177 - MER58B DNA MER1_type 0 341 1 963 219 0 46 chr17 56428241 56428460 -33076093 - MER58A DNA MER1_type -15 209 1 231 211 14 42 chr17 56429145 56429216 -33075337 - MIR SINE MIR -11 251 183 21 0 0 0 chr17 56429319 56429340 -33075213 + AT_rich Low_complexity Low_complexity 1 21 0 467 242 41 61 chr17 56429483 56429657 -33074896 - MIR SINE MIR -62 146 25 241 313 0 0 chr17 56430086 56430182 -33074371 + L1ME4a LINE L1 5959 6054 -67 25 31 0 0 chr17 56431233 56431265 -33073288 + AT_rich Low_complexity Low_complexity 1 32 0 331 241 13 13 chr17 56431393 56431472 -33073081 - MIR SINE MIR -6 256 178 413 277 112 32 chr17 56431554 56431742 -33072811 - MIR SINE MIR -3 259 57 267 288 42 25 chr17 56432215 56432333 -33072220 - MIR SINE MIR -68 140 21 789 88 0 0 chr17 56432976 56433090 -33071463 + L1PA5 LINE L1 6041 6154 0 744 169 31 0 chr17 56433102 56433232 -33071321 + AluSp SINE Alu 1 134 -179 2214 29 68 7 chr17 56433233 56433539 -33071014 + AluY SINE Alu 1 311 0 391 264 97 14 chr17 56433562 56433706 -33070847 + MLT1J1 LTR MaLR 135 290 -156 243 250 133 0 chr17 56435519 56435579 -33068974 - L2 LINE L2 0 3272 3205 266 333 29 20 chr17 56435621 56435723 -33068830 + L2 LINE L2 3169 3271 -1 218 316 88 44 chr17 56437926 56438062 -33066491 + L2 LINE L2 2705 2846 -468 182 203 176 54 chr17 56438371 56438445 -33066108 + L2 LINE L2 3231 3313 0 403 297 8 23 chr17 56438610 56438738 -33065815 - MIR SINE MIR -114 148 23 290 179 107 0 chr17 56438845 56438901 -33065652 - MIR SINE MIR -84 178 117 353 331 64 19 chr17 56439631 56439788 -33064765 - MIR SINE MIR -79 183 20 345 296 35 35 chr17 56440604 56440746 -33063807 - MIR SINE MIR -3 259 118 29 0 0 0 chr17 56440989 56441018 -33063535 + AT_rich Low_complexity Low_complexity 1 29 0 204 97 0 0 chr17 56441424 56441455 -33063098 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 56442084 56442105 -33062448 + AT_rich Low_complexity Low_complexity 1 21 0 225 94 0 0 chr17 56444917 56444949 -33059604 + (CGG)n Simple_repeat Simple_repeat 3 34 0 311 330 98 57 chr17 56445041 56445408 -33059145 - L1M2 LINE L1 -5878 971 590 303 327 178 5 chr17 56445620 56445828 -33058725 - L1M2 LINE L1 -5927 922 679 621 100 0 0 chr17 56447614 56447704 -33056849 + (TTTC)n Simple_repeat Simple_repeat 2 91 0 189 300 0 20 chr17 56447909 56447959 -33056594 - L2 LINE L2 -18 3254 3206 437 352 60 5 chr17 56448253 56448452 -33056101 - MIR SINE MIR -28 234 25 257 271 17 0 chr17 56448682 56448741 -33055812 - L2 LINE L2 -28 3285 3226 2635 233 38 35 chr17 56449839 56451506 -33053047 + L1ME1 LINE L1 4493 6154 -12 5114 136 29 67 chr17 56452509 56452910 -33051643 + L1MA3 LINE L1 5228 5643 -662 353 60 20 0 chr17 56452910 56452960 -33051593 - MADE1 DNA Mariner -29 51 1 5114 136 29 67 chr17 56452960 56453629 -33050924 + L1MA3 LINE L1 5643 6305 0 24 0 0 0 chr17 56453702 56453726 -33050827 + AT_rich Low_complexity Low_complexity 1 24 0 243 197 76 0 chr17 56453796 56453862 -33050691 - MLT1D LTR MaLR 0 505 435 24 0 0 0 chr17 56453862 56453886 -33050667 + AT_rich Low_complexity Low_complexity 1 24 0 1337 238 136 2 chr17 56454032 56454436 -33050117 - MLT1D LTR MaLR -47 458 1 190 233 0 0 chr17 56455063 56455106 -33049447 + L2 LINE L2 3230 3272 0 309 328 25 25 chr17 56455223 56455342 -33049211 - MIR3 SINE MIR -48 160 42 213 143 24 0 chr17 56455527 56455569 -33048984 + (TG)n Simple_repeat Simple_repeat 2 44 0 1515 204 11 21 chr17 56457474 56457785 -33046768 + AluJo SINE Alu 1 308 0 999 253 231 13 chr17 56458240 56458851 -33045702 - LTR50 LTR ERVL -20 775 18 2263 97 0 10 chr17 56458851 56459150 -33045403 + AluSq SINE Alu 1 296 -17 999 253 231 13 chr17 56459150 56459174 -33045379 - LTR50 LTR ERVL -777 18 1 283 346 69 25 chr17 56459834 56460036 -33044517 + MIR SINE MIR 8 218 -44 304 259 72 114 chr17 56460412 56460605 -33043948 + MIR SINE MIR 35 219 -43 421 301 17 69 chr17 56460667 56460840 -33043713 + MIR SINE MIR 28 191 -71 203 333 0 0 chr17 56460862 56460925 -33043628 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 258 194 0 0 chr17 56460928 56460990 -33043563 + (TA)n Simple_repeat Simple_repeat 1 62 0 308 287 0 11 chr17 56462162 56462256 -33042297 + MARNA DNA Mariner 357 449 -137 223 429 0 0 chr17 56462346 56462465 -33042088 - L3 LINE CR1 -77 1500 1382 468 51 0 0 chr17 56462469 56462528 -33042025 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2086 99 0 4 chr17 56462543 56462815 -33041738 - AluSq SINE Alu -42 271 1 2133 113 7 3 chr17 56462860 56463151 -33041402 - AluSc SINE Alu -17 292 1 219 283 50 0 chr17 56463288 56463348 -33041205 - L3 LINE CR1 -471 1106 1044 204 239 0 0 chr17 56463349 56463395 -33041158 + (TATG)n Simple_repeat Simple_repeat 1 46 0 1036 305 86 40 chr17 56463423 56464240 -33040313 - L2 LINE L2 0 3313 2460 413 243 90 35 chr17 56464371 56464515 -33040038 + MIR3 SINE MIR 26 177 -31 479 322 17 17 chr17 56465483 56465660 -33038893 - MER5A DNA MER1_type 0 189 13 2037 67 42 80 chr17 56465930 56466242 -33038311 - AluY SINE Alu -11 300 1 21 95 0 0 chr17 56466315 56466378 -33038175 + AT_rich Low_complexity Low_complexity 1 63 0 314 256 123 21 chr17 56466929 56467123 -33037430 - L1MC5 LINE L1 -977 6837 6608 183 80 0 0 chr17 56467124 56467149 -33037404 + (TATG)n Simple_repeat Simple_repeat 3 27 0 419 311 185 44 chr17 56467280 56467875 -33036678 - L1MC4a LINE L1 -1299 6509 5831 184 129 65 145 chr17 56468115 56468177 -33036376 - L2 LINE L2 0 3272 3216 240 299 172 19 chr17 56469057 56469214 -33035339 + MIR SINE MIR 2 182 -80 24 0 0 0 chr17 56469991 56470015 -33034538 + AT_rich Low_complexity Low_complexity 1 24 0 730 289 51 31 chr17 56470033 56470289 -33034264 - MIR SINE MIR 0 262 2 256 316 152 12 chr17 56470504 56470675 -33033878 - MIR3 SINE MIR -9 199 5 1884 217 81 63 chr17 56471207 56471821 -33032732 + MLT1E2 LTR MaLR 2 626 0 1828 133 15 4 chr17 56472073 56472337 -33032216 + AluSx SINE Alu 1 267 -45 7839 17 0 0 chr17 56472337 56473511 -33031042 + L1PA2 LINE L1 4982 6155 0 2084 139 18 21 chr17 56474408 56474745 -33029808 - MER1B DNA MER1_type -1 336 1 441 278 42 47 chr17 56475448 56475660 -33028893 - L1MDa LINE L1 -3953 2176 1966 206 128 26 0 chr17 56475664 56475703 -33028850 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 3624 176 21 20 chr17 56476127 56476892 -33027661 - L1MB7 LINE L1 -20 6164 5399 1325 223 39 3 chr17 56476890 56477227 -33027326 - L1MB7 LINE L1 -1483 4663 4315 * 354 270 95 41 chr17 56477357 56477672 -33026881 - L1MDa LINE L1 -4892 1227 896 860 340 111 22 chr17 56477769 56478460 -33026093 - L1MDa LINE L1 -5366 753 1 713 283 62 72 chr17 56479790 56480260 -33024293 + L1MEd LINE L1 676 1140 -4979 215 375 35 7 chr17 56481286 56481430 -33023123 + MIR SINE MIR 49 196 -66 342 365 35 0 chr17 56481659 56481804 -33022749 + L2 LINE L2 3123 3272 0 441 240 27 60 chr17 56482550 56482638 -33021915 - L2 LINE L2 -528 2786 2703 1096 226 9 0 chr17 56482638 56482855 -33021698 - MER20 DNA MER1_type 0 219 1 441 240 27 60 chr17 56482855 56482916 -33021637 - L2 LINE L2 -611 2703 2642 2002 131 18 42 chr17 56482937 56483319 -33021234 + THE1C LTR MaLR 3 375 0 3413 176 50 43 chr17 56483806 56484899 -33019654 + LTR49-int LTR ERV1 4927 6146 -452 1010 169 11 13 chr17 56484917 56485233 -33019320 + LTR47A LTR ERVL 2 366 -86 1888 224 54 39 chr17 56485279 56486055 -33018498 - L1ME1 LINE L1 -242 5924 5149 2192 150 14 0 chr17 56486077 56486444 -33018109 - L1PB4 LINE L1 -3 6153 5782 181 73 24 49 chr17 56486451 56486492 -33018061 + (CATAT)n Simple_repeat Simple_repeat 1 40 0 1801 194 33 65 chr17 56487644 56487935 -33016618 - L1MB7 LINE L1 -1988 4158 3884 2931 157 20 70 chr17 56487935 56488579 -33015974 - LTR9 LTR ERV1 0 612 1 1801 194 33 65 chr17 56488579 56488736 -33015817 - L1MB7 LINE L1 -2262 3884 3724 * 4242 173 60 28 chr17 56488731 56489397 -33015156 + L1MA10 LINE L1 4169 4812 -1377 2301 94 7 0 chr17 56489397 56489696 -33014857 + AluY SINE Alu 1 301 -10 4242 173 60 28 chr17 56489696 56490730 -33013823 + L1MA10 LINE L1 4812 5936 -253 830 265 72 7 chr17 56490743 56491034 -33013519 + MER2 DNA MER2_type 21 330 -15 1599 203 40 3 chr17 56491041 56491263 -33013290 + L1MA10 LINE L1 5938 6181 -153 365 86 17 0 chr17 56491263 56491321 -33013232 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 1599 203 40 3 chr17 56491321 56491473 -33013080 + L1MA10 LINE L1 6181 6326 -8 296 274 41 102 chr17 56492704 56492901 -33011652 + L2 LINE L2 2609 2793 -521 456 246 48 32 chr17 56493019 56493185 -33011368 - MIR SINE MIR -68 140 29 1234 302 37 22 chr17 56493432 56493842 -33010711 + LTR16C LTR ERVL 74 489 -2 389 307 49 56 chr17 56494095 56494499 -33010054 + L2 LINE L2 1468 1955 -1359 241 208 0 0 chr17 56494536 56494584 -33009969 + L2 LINE L2 1910 1957 -1357 397 326 73 80 chr17 56494670 56495370 -33009183 + L2 LINE L2 1978 2672 -642 186 368 24 84 chr17 56495602 56495852 -33008701 + L2 LINE L2 3030 3264 -8 432 302 30 24 chr17 56495974 56496143 -33008410 + MIR SINE MIR 33 202 -60 646 287 107 24 chr17 56496243 56496626 -33007927 - MLT1L LTR MaLR -2 613 199 25 0 0 0 chr17 56497685 56497710 -33006843 + AT_rich Low_complexity Low_complexity 1 25 0 194 103 0 51 chr17 56497894 56497933 -33006620 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 27 49 0 0 chr17 56498396 56498437 -33006116 + AT_rich Low_complexity Low_complexity 1 41 0 212 282 200 0 chr17 56498612 56498697 -33005856 - MIR SINE MIR -91 117 16 261 297 129 20 chr17 56498855 56498956 -33005597 + MIR SINE MIR 12 123 -139 * 307 290 0 43 chr17 56498950 56499043 -33005510 + L2 LINE L2 3206 3294 -19 2365 132 17 3 chr17 56499434 56499789 -33004764 - THE1B LTR MaLR -4 360 1 226 0 0 56 chr17 56499798 56499834 -33004719 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2138 116 0 0 chr17 56500719 56501011 -33003542 + AluSx SINE Alu 1 292 -20 181 163 102 20 chr17 56501769 56501818 -33002735 - L2 LINE L2 -1491 1823 1771 324 0 0 0 chr17 56502151 56502187 -33002366 + (CA)n Simple_repeat Simple_repeat 2 37 0 1878 212 32 34 chr17 56502296 56502763 -33001790 + MLT1C LTR MaLR 2 467 0 24 0 0 0 chr17 56502852 56502876 -33001677 + AT_rich Low_complexity Low_complexity 1 24 0 380 331 94 0 chr17 56503580 56503707 -33000846 + L2 LINE L2 3134 3272 0 255 363 20 11 chr17 56505610 56505716 -32998837 - MIR SINE MIR -87 121 16 229 412 0 0 chr17 56505910 56505995 -32998558 - L2 LINE L2 -2 3270 3186 509 289 141 15 chr17 56506114 56506510 -32998043 + L2 LINE L2 2756 3192 -121 183 333 109 14 chr17 56506570 56506717 -32997836 - MIR SINE MIR -6 256 96 1694 143 29 18 chr17 56507193 56507353 -32997200 - AluSq SINE Alu -18 295 129 297 0 0 0 chr17 56507353 56507386 -32997167 + (CA)n Simple_repeat Simple_repeat 2 34 0 1694 143 29 18 chr17 56507386 56507505 -32997048 - AluSq SINE Alu -184 129 13 1894 85 0 0 chr17 56507637 56507873 -32996680 + AluY SINE Alu 69 304 -7 536 253 97 53 chr17 56507907 56508161 -32996392 + MIR SINE MIR 2 262 0 603 244 7 30 chr17 56508870 56509005 -32995548 - L2 LINE L2 0 3272 3141 1606 176 45 3 chr17 56509526 56509604 -32994949 - MER34B LTR ERV1 0 565 492 2201 124 0 16 chr17 56509604 56509919 -32994634 + AluSx SINE Alu 3 312 0 1606 176 45 3 chr17 56509919 56510153 -32994400 - MER34B LTR ERV1 -73 492 240 476 158 0 125 chr17 56510208 56510328 -32994225 - MER34B LTR ERV1 -450 115 11 260 136 45 0 chr17 56512821 56512865 -32991688 - L2 LINE L2 0 3313 3268 4079 130 9 2 chr17 56512944 56513574 -32990979 - MER41B LTR ERV1 0 635 1 207 307 27 13 chr17 56513918 56513993 -32990560 + L2 LINE L2 3234 3309 -4 803 106 0 0 chr17 56515886 56515999 -32988554 - AluSg/x SINE Alu -14 296 184 357 248 184 44 chr17 56516624 56516911 -32987642 - MLT1J LTR MaLR -147 303 3 188 315 152 55 chr17 56517015 56517469 -32987084 + L2 LINE L2 1731 2228 -1086 183 379 142 19 chr17 56518113 56518324 -32986229 + MIR SINE MIR 20 256 -6 212 277 0 0 chr17 56519302 56519349 -32985204 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 201 284 0 32 chr17 56519439 56519534 -32985019 + (TA)n Simple_repeat Simple_repeat 2 93 0 1213 203 47 43 chr17 56519541 56519842 -32984711 - MLT2C1 LTR ERVL -95 302 1 23 0 0 0 chr17 56520005 56520028 -32984525 + AT_rich Low_complexity Low_complexity 1 23 0 1662 220 8 14 chr17 56520043 56520407 -32984146 + MLT1A1 LTR MaLR 4 365 0 289 326 53 15 chr17 56520528 56520660 -32983893 - MIR SINE MIR -56 206 70 211 310 5 60 chr17 56521256 56521370 -32983183 + MIR SINE MIR 29 131 -77 368 296 138 7 chr17 56523069 56523221 -32981332 + MLT1H LTR MaLR 8 179 -370 1701 174 28 3 chr17 56523221 56523548 -32981005 - MER93b LTR ERV1 0 373 39 235 118 0 0 chr17 56523544 56523578 -32980975 + MLT1H1 LTR MaLR 513 546 -9 * 305 348 28 0 chr17 56524507 56524648 -32979905 - L2 LINE L2 -212 3060 2916 1756 157 7 11 chr17 56525956 56526243 -32978310 - AluJb SINE Alu -16 296 11 560 336 21 25 chr17 56526327 56526565 -32977988 + MIR SINE MIR 5 241 -21 394 287 98 45 chr17 56527982 56528245 -32976308 - MLT1L LTR MaLR -191 424 148 833 276 28 0 chr17 56528245 56528459 -32976094 - MER58A DNA MER1_type 0 224 5 396 279 29 0 chr17 56528493 56528597 -32975956 + MER94 DNA DNA 2 108 -26 903 298 67 26 chr17 56528746 56529206 -32975347 - L2 LINE L2 -366 2948 2470 570 279 101 53 chr17 56529247 56529494 -32975059 - MIR SINE MIR -3 259 1 233 336 47 28 chr17 56529735 56529842 -32974711 + L2 LINE L2 3148 3256 -16 1841 227 11 65 chr17 56530077 56530632 -32973921 - L1MC4a LINE L1 0 7808 7284 268 338 56 56 chr17 56532267 56532498 -32972055 + L2 LINE L2 456 686 -2628 740 356 63 20 chr17 56532572 56533067 -32971486 + L2 LINE L2 679 1194 -2120 1316 321 39 15 chr17 56533086 56533671 -32970882 + L2 LINE L2 1854 2452 -862 202 250 23 0 chr17 56533669 56533713 -32970840 + L2 LINE L2 3015 3059 -254 * 225 305 181 29 chr17 56533748 56533853 -32970700 + L2 LINE L2 3190 3310 -3 323 218 36 9 chr17 56534257 56534367 -32970186 + (TA)n Simple_repeat Simple_repeat 1 113 0 2419 153 26 0 chr17 56534631 56535048 -32969505 + MSTA LTR MaLR 1 428 0 967 280 83 78 chr17 56535077 56535306 -32969247 + HAL1 LINE L1 149 375 -2132 2033 108 3 17 chr17 56535306 56535602 -32968951 + AluSx SINE Alu 11 302 -10 967 280 83 78 chr17 56535602 56536164 -32968389 + HAL1 LINE L1 375 944 -1563 3093 237 89 53 chr17 56536232 56537540 -32967013 + HAL1 LINE L1 1153 2507 0 323 274 59 46 chr17 56537585 56537738 -32966815 + L1ME LINE L1 4390 4544 -1602 468 277 131 77 chr17 56538568 56538943 -32965610 - HAL1 LINE L1 -2112 395 1 23 0 0 0 chr17 56539224 56539247 -32965306 + AT_rich Low_complexity Low_complexity 1 23 0 245 267 186 19 chr17 56539311 56539569 -32964984 + L1ME LINE L1 5564 5864 -257 267 137 0 78 chr17 56539820 56539871 -32964682 + L2 LINE L2 3266 3312 -1 1691 151 38 10 chr17 56540665 56540957 -32963596 - AluJb SINE Alu -12 300 1 474 306 59 22 chr17 56541109 56541331 -32963222 + MIR SINE MIR 15 244 -18 28 48 0 0 chr17 56542061 56542103 -32962450 + AT_rich Low_complexity Low_complexity 1 42 0 235 332 50 96 chr17 56542725 56542945 -32961608 + L2 LINE L2 3060 3269 -3 402 294 76 67 chr17 56542998 56543430 -32961123 - L1ME LINE L1 -307 5814 5379 560 129 11 11 chr17 56543502 56543595 -32960958 + MER4B-int LTR ERV1 4590 4682 -2076 2022 127 51 6 chr17 56543600 56543912 -32960641 - LTR9B LTR ERV1 -6 638 313 1901 179 100 31 chr17 56543912 56544370 -32960183 + LTR2B LTR ERV1 1 490 0 * 2031 112 35 10 chr17 56544370 56544678 -32959875 - LTR9B LTR ERV1 -328 316 1 3519 150 14 39 chr17 56544678 56545338 -32959215 + MER4B-int LTR ERV1 4678 5320 -1438 483 132 62 15 chr17 56545448 56545923 -32958630 + (TA)n Simple_repeat Simple_repeat 1 497 0 9647 173 25 42 chr17 56546035 56546791 -32957762 - L1P5 LINE L1 -359 5797 5029 2087 135 23 49 chr17 56546791 56547176 -32957377 - THE1C LTR MaLR 0 375 1 9647 173 25 42 chr17 56547176 56549144 -32955409 - L1P5 LINE L1 -1127 5029 3117 1278 300 42 13 chr17 56550295 56550827 -32953726 - HERV16 LTR ERVL -2506 2490 1930 1074 327 84 9 chr17 56550993 56551541 -32953012 - HERV16 LTR ERVL -4135 861 273 485 312 117 4 chr17 56551801 56552159 -32952394 - LTR16A LTR ERVL 0 450 8 243 0 0 0 chr17 56552424 56552451 -32952102 + (CA)n Simple_repeat Simple_repeat 2 28 0 647 270 214 43 chr17 56553505 56553879 -32950674 + L2 LINE L2 2807 3244 -69 225 65 0 0 chr17 56554311 56554342 -32950211 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 273 303 99 28 chr17 56554350 56554492 -32950061 - MIR SINE MIR -8 254 103 491 276 66 99 chr17 56554868 56555259 -32949294 + LTR16A1 LTR ERVL 98 455 -2 2021 121 11 4 chr17 56555551 56555874 -32948679 + AluSc SINE Alu 1 325 0 226 335 68 119 chr17 56555912 56556205 -32948348 - L2 LINE L2 -21 3251 2974 281 160 56 0 chr17 56558667 56558792 -32945761 + (TA)n Simple_repeat Simple_repeat 1 132 0 191 130 0 22 chr17 56558793 56558839 -32945714 + (GA)n Simple_repeat Simple_repeat 2 46 0 1297 190 35 28 chr17 56558840 56559129 -32945424 - MLT2D LTR ERVL -123 291 1 1975 269 71 3 chr17 56559260 56559880 -32944673 - L1MC4 LINE L1 -143 7899 7238 989 266 146 17 chr17 56559894 56560301 -32944252 - L1MC4 LINE L1 -980 7062 6584 2111 130 3 19 chr17 56560301 56560616 -32943937 - AluSx SINE Alu -2 310 1 989 266 146 17 chr17 56560616 56560682 -32943871 - L1MC4 LINE L1 -1458 6584 6528 329 272 68 34 chr17 56560996 56561143 -32943410 - MIR SINE MIR 0 262 111 222 292 90 56 chr17 56561340 56561429 -32943124 + MIR SINE MIR 8 99 -163 319 68 34 34 chr17 56561562 56561621 -32942932 + (GAAA)n Simple_repeat Simple_repeat 3 61 0 1140 184 14 9 chr17 56561633 56561850 -32942703 - MLT2B3 LTR ERVL -334 220 3 258 285 41 81 chr17 56562116 56562239 -32942314 - MER5A DNA MER1_type 0 189 72 3036 23 0 0 chr17 56562535 56562886 -32941667 - L1P2 LINE L1 -1671 4475 4125 * 7233 48 7 0 chr17 56562885 56563951 -32940602 + L1P2 LINE L1 4474 5543 -611 2305 55 48 0 chr17 56564051 56564342 -32940211 + AluY SINE Alu 1 305 -6 264 254 0 0 chr17 56564410 56564469 -32940084 + GA-rich Low_complexity Low_complexity 3 61 0 283 269 17 17 chr17 56564469 56564644 -32939909 + HAL1b LINE L1 636 810 -538 2401 67 0 10 chr17 56565375 56565688 -32938865 + AluY SINE Alu 1 310 -1 266 359 8 8 chr17 56565698 56565829 -32938724 + MLT1L LTR MaLR 420 550 -65 246 288 0 0 chr17 56565931 56565990 -32938563 - L2 LINE L2 0 3272 3214 1967 119 0 53 chr17 56567104 56567424 -32937129 + AluSx SINE Alu 1 303 -9 1948 81 24 54 chr17 56567644 56567939 -32936614 - AluSg SINE Alu -16 294 9 487 357 25 8 chr17 56568050 56568291 -32936262 + MLT1L LTR MaLR 30 274 -341 289 261 99 42 chr17 56568411 56568553 -32936000 + MLT1L LTR MaLR 458 607 -8 379 301 23 60 chr17 56568583 56568716 -32935837 - L2 LINE L2 0 3272 3145 426 225 0 0 chr17 56568738 56568827 -32935726 + L1PB4 LINE L1 6056 6144 -12 5874 59 4 0 chr17 56568831 56569574 -32934979 + L1PA7 LINE L1 5405 6150 -4 1509 171 4 41 chr17 56569650 56569919 -32934634 - AluJo SINE Alu -18 294 36 1217 241 52 71 chr17 56569919 56570342 -32934211 + L1MD2 LINE L1 5923 6337 -22 2246 112 0 0 chr17 56570473 56570768 -32933785 - AluSq SINE Alu -18 295 1 1281 310 48 30 chr17 56570808 56571373 -32933180 + HAL1 LINE L1 110 684 -1823 393 286 158 28 chr17 56571389 56571736 -32932817 - MLT1G1 LTR MaLR -10 545 126 1300 244 171 71 chr17 56571812 56572879 -32931674 + HAL1 LINE L1 703 1876 -631 776 276 95 55 chr17 56572946 56573523 -32931030 + HAL1 LINE L1 1688 2287 -220 22 0 0 0 chr17 56573580 56573602 -32930951 + AT_rich Low_complexity Low_complexity 1 22 0 299 375 119 12 chr17 56573766 56574017 -32930536 - L2 LINE L2 -337 2977 2700 1540 186 10 21 chr17 56574036 56574326 -32930227 - AluJo SINE Alu -25 287 1 494 274 173 98 chr17 56574721 56575188 -32929365 - L2 LINE L2 -1 3312 2811 317 379 30 23 chr17 56575250 56575514 -32929039 + L2 LINE L2 2593 2858 -456 2041 111 102 9 chr17 56576314 56576657 -32927896 + THE1C LTR MaLR 1 375 0 402 354 27 14 chr17 56576811 56576958 -32927595 - MIR3 SINE MIR -44 164 16 432 321 57 93 chr17 56577552 56577919 -32926634 + L2 LINE L2 2910 3263 -9 253 359 154 18 chr17 56578523 56578743 -32925810 + MIR SINE MIR 2 251 -11 480 304 31 70 chr17 56579048 56579305 -32925248 + MIR SINE MIR 10 256 -6 206 288 27 14 chr17 56579584 56579657 -32924896 - MIR3 SINE MIR -48 160 87 338 332 148 51 chr17 56581125 56581517 -32923036 + L2 LINE L2 2884 3313 0 22 0 0 0 chr17 56581627 56581649 -32922904 + AT_rich Low_complexity Low_complexity 1 22 0 579 113 0 0 chr17 56581960 56582040 -32922513 - AluSg/x SINE Alu -21 288 209 261 294 105 56 chr17 56583444 56583996 -32920557 + L1ME LINE L1 3784 4362 -1784 24 67 0 0 chr17 56583996 56584041 -32920512 + AT_rich Low_complexity Low_complexity 1 45 0 321 350 51 15 chr17 56584164 56584618 -32919935 + L1ME LINE L1 4741 5210 -936 1912 167 48 32 chr17 56584669 56585215 -32919338 + MLT2A2 LTR ERVL 1 554 0 255 277 0 15 chr17 56585250 56585315 -32919238 + LTR67 LTR ERVL 42 105 -452 561 268 82 27 chr17 56585442 56585662 -32918891 + LTR67 LTR ERVL 326 557 0 571 257 86 23 chr17 56585664 56585968 -32918585 + L1ME LINE L1 5255 5577 -585 2135 71 17 14 chr17 56586940 56587237 -32917316 + L1PA13 LINE L1 5861 6158 -5 980 204 18 49 chr17 56588093 56588318 -32916235 + MER20 DNA MER1_type 2 219 0 6405 120 1 1 chr17 56588384 56589351 -32915202 - THE1A-int LTR MaLR -613 967 1 2581 94 14 0 chr17 56589351 56589701 -32914852 - THE1A LTR MaLR 0 355 1 576 288 47 39 chr17 56589905 56590138 -32914415 - MLT1H1 LTR MaLR 0 555 321 1059 190 18 49 chr17 56590185 56590411 -32914142 - MER20 DNA MER1_type 0 219 1 419 304 18 6 chr17 56590447 56590639 -32913914 - MLT1H1 LTR MaLR -312 237 1 608 288 36 24 chr17 56590754 56591004 -32913549 + MIR SINE MIR 10 262 0 1841 136 68 4 chr17 56591420 56591700 -32912853 + AluSq SINE Alu 1 298 -15 42 48 0 0 chr17 56591727 56591790 -32912763 + AT_rich Low_complexity Low_complexity 1 63 0 3995 194 15 31 chr17 56592653 56593688 -32910865 + L1MA9 LINE L1 5180 6198 -114 342 299 0 10 chr17 56594946 56595043 -32909510 - MLT1J2 LTR MaLR -291 159 64 1706 172 44 21 chr17 56595333 56595671 -32908882 + MER7A DNA MER2_type 2 345 -1 281 222 0 11 chr17 56596651 56596741 -32907812 + (TA)n Simple_repeat Simple_repeat 2 90 0 658 248 0 0 chr17 56597523 56597664 -32906889 + MIR3 SINE MIR 37 177 -31 503 307 74 6 chr17 56598227 56598390 -32906163 - MER5A DNA MER1_type -7 182 9 232 255 0 78 chr17 56598536 56598638 -32905915 + MIR SINE MIR 119 212 -50 1391 251 30 16 chr17 56598946 56599313 -32905240 + L1MD3 LINE L1 6497 6868 -1127 206 176 20 0 chr17 56599366 56599417 -32905136 + (TA)n Simple_repeat Simple_repeat 1 52 0 282 248 83 0 chr17 56599420 56599529 -32905024 + L1MD3 LINE L1 6897 7014 -981 26 0 0 0 chr17 56599538 56599564 -32904989 + AT_rich Low_complexity Low_complexity 1 26 0 752 254 70 5 chr17 56599843 56600056 -32904497 + Charlie1 DNA MER1_type 1 227 -2534 560 217 7 0 chr17 56600052 56600190 -32904363 + Charlie1 DNA MER1_type 2622 2760 -1 * 21 0 0 0 chr17 56600896 56600917 -32903636 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr17 56601338 56601365 -32903188 + AT_rich Low_complexity Low_complexity 1 27 0 1271 133 0 5 chr17 56602278 56602488 -32902065 - L1PB1 LINE L1 -2 6149 5941 6778 209 16 17 chr17 56602488 56603333 -32901220 + L1 LINE L1 2302 3147 -2999 1956 149 76 15 chr17 56603333 56603676 -32900877 - THE1B LTR MaLR 0 364 1 11366 98 9 9 chr17 56603676 56605256 -32899297 - THE1B-int LTR MaLR 0 1580 1 1969 158 73 15 chr17 56605256 56605598 -32898955 - THE1B LTR MaLR 0 364 3 6778 209 16 17 chr17 56605598 56606483 -32898070 + L1 LINE L1 3144 4031 -2115 306 247 0 0 chr17 56607506 56607599 -32896954 + CT-rich Low_complexity Low_complexity 3 95 0 297 51 0 0 chr17 56607845 56607884 -32896669 + (CA)n Simple_repeat Simple_repeat 2 40 0 2563 64 0 3 chr17 56608292 56608604 -32895949 + AluY SINE Alu 1 311 0 202 250 29 29 chr17 56609607 56609675 -32894878 + MIR SINE MIR 46 113 -149 25 0 0 0 chr17 56609706 56609731 -32894822 + AT_rich Low_complexity Low_complexity 1 25 0 348 83 0 0 chr17 56609828 56609876 -32894677 + (TG)n Simple_repeat Simple_repeat 2 49 0 536 132 28 28 chr17 56611181 56611287 -32893266 - L1PA8 LINE L1 0 6172 6067 3267 53 17 0 chr17 56611348 56611763 -32892790 - L1PA5 LINE L1 0 6154 5733 600 256 139 17 chr17 56612129 56612359 -32892194 + MIR SINE MIR 5 262 0 623 343 25 13 chr17 56612805 56613044 -32891509 - MIR SINE MIR -7 255 14 2049 157 0 0 chr17 56613660 56613965 -32890588 + AluSx SINE Alu 1 305 -7 330 223 83 33 chr17 56614485 56614606 -32889947 - MIR SINE MIR 0 262 136 2207 108 13 0 chr17 56614639 56614944 -32889609 - AluSc SINE Alu 0 309 1 1996 202 42 0 chr17 56614962 56615413 -32889140 - L1MD3 LINE L1 -9 7986 7517 1143 180 4 33 chr17 56615412 56615665 -32888888 + L1MD3 LINE L1 7009 7255 -740 * 1828 178 58 34 chr17 56615665 56616080 -32888473 + MSTB LTR MaLR 2 426 0 1143 180 4 33 chr17 56616080 56616098 -32888455 + L1MD3 LINE L1 7255 7272 -723 239 233 45 105 chr17 56616100 56616204 -32888349 + MLT1F1 LTR MaLR 1 97 -470 1699 86 27 0 chr17 56616204 56616424 -32888129 - AluY SINE Alu -3 308 83 239 233 45 105 chr17 56616424 56616452 -32888101 + MLT1F1 LTR MaLR 97 125 -442 317 173 185 0 chr17 56616452 56616533 -32888020 + L1MD3 LINE L1 7404 7499 -496 952 204 15 44 chr17 56617390 56617596 -32886957 - AluJo SINE Alu -25 287 88 494 296 81 27 chr17 56619207 56619393 -32885160 - MIR SINE MIR -32 230 35 2563 51 0 10 chr17 56619641 56619955 -32884598 + AluY SINE Alu 1 311 0 368 292 99 31 chr17 56620176 56620337 -32884216 - MIR SINE MIR -56 206 35 2363 48 3 10 chr17 56620585 56620880 -32883673 + AluY SINE Alu 1 293 -18 37 23 0 0 chr17 56621272 56621316 -32883237 + AT_rich Low_complexity Low_complexity 1 44 0 1347 212 60 7 chr17 56621320 56621483 -32883070 - AluJo SINE Alu -14 298 112 222 37 0 0 chr17 56621483 56621510 -32883043 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1347 212 60 7 chr17 56621510 56621629 -32882924 - AluJo SINE Alu -200 112 1 282 231 10 116 chr17 56621897 56622096 -32882457 + HAL1b LINE L1 91 268 -1080 2621 19 16 3 chr17 56622152 56622460 -32882093 + L1PA7 LINE L1 5830 6141 -13 1546 169 30 55 chr17 56622749 56623111 -32881442 - MLT1B LTR MaLR -37 353 1 309 262 40 71 chr17 56623177 56623303 -32881250 + L1MC4a LINE L1 5791 5912 -1896 2346 99 0 0 chr17 56623499 56623791 -32880762 + AluSx SINE Alu 1 292 -20 281 321 97 72 chr17 56623984 56624221 -32880332 - L2 LINE L2 -4 3268 3026 188 83 0 56 chr17 56624986 56625022 -32879531 + (GGA)n Simple_repeat Simple_repeat 2 35 0 21568 88 2 12 chr17 56625840 56629066 -32875487 - L1P LINE L1 -2428 3718 525 1009 193 5 16 chr17 56629073 56629260 -32875293 + AluJb SINE Alu 114 298 -14 3182 173 63 7 chr17 56630416 56630987 -32873566 + LTR26 LTR ERV1 1 603 0 428 317 106 41 chr17 56631261 56631630 -32872923 - L2 LINE L2 -613 2701 2309 21 36 0 0 chr17 56631949 56631977 -32872576 + AT_rich Low_complexity Low_complexity 1 28 0 369 338 90 21 chr17 56632213 56632447 -32872106 + MIR SINE MIR 6 255 -7 3404 259 70 27 chr17 56633204 56634632 -32869921 + L1M4 LINE L1 2521 4010 -2136 1846 37 0 5 chr17 56634828 56635046 -32869507 + HERVK LTR ERVK 6932 7148 -95 477 64 11 160 chr17 56635046 56635140 -32869413 + SVA Other Other 857 936 -450 8631 46 0 0 chr17 56635140 56636109 -32868444 + LTR5 LTR ERVK 1 969 0 6461 89 0 0 chr17 56636109 56636936 -32867617 - HERVK11 LTR ERVK -3363 4590 3764 1065 101 7 0 chr17 56637037 56637175 -32867378 - AluSq/x SINE Alu -174 139 1 1469 182 0 120 chr17 56637176 56637550 -32867003 + MLT1A1 LTR MaLR 37 365 0 189 0 0 0 chr17 56637818 56637839 -32866714 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1915 136 3 3 chr17 56637843 56638129 -32866424 - AluJb SINE Alu -26 286 1 26 0 0 0 chr17 56638238 56638264 -32866289 + AT_rich Low_complexity Low_complexity 1 26 0 234 281 45 22 chr17 56638374 56638463 -32866090 - MIR SINE MIR -157 105 15 453 270 61 49 chr17 56638473 56638636 -32865917 + L2 LINE L2 3106 3270 -2 984 205 78 37 chr17 56638714 56638982 -32865571 - MLT2B2 LTR ERVL 0 515 237 212 297 46 69 chr17 56639200 56639375 -32865178 - L2 LINE L2 -463 2851 2681 5849 26 3 5 chr17 56639865 56640517 -32864036 - L1PA3 LINE L1 0 6155 5505 25574 29 2 0 chr17 56640517 56643547 -32861006 - L1P LINE L1 -822 5333 2295 1663 179 25 15 chr17 56643647 56643971 -32860582 + L1MB7 LINE L1 5858 6184 0 376 202 93 54 chr17 56645652 56645781 -32858772 - L1M4 LINE L1 -2451 3695 3562 1116 122 0 58 chr17 56646113 56646285 -32858268 - AluSx SINE Alu -150 162 1 476 226 7 36 chr17 56646285 56646422 -32858131 - L1M4 LINE L1 -821 5325 5193 261 303 0 0 chr17 56646422 56646498 -32858055 + MIR SINE MIR 79 154 -108 464 263 11 0 chr17 56646732 56646827 -32857726 - MER5A DNA MER1_type -84 105 10 368 203 0 0 chr17 56646828 56646892 -32857661 + MSTB-int LTR MaLR 358 421 -1230 5127 184 24 20 chr17 56646903 56647860 -32856693 + MSTB-int LTR MaLR 691 1651 0 2467 141 102 3 chr17 56647860 56648244 -32856309 + MSTB LTR MaLR 1 422 -4 284 145 0 16 chr17 56648969 56649031 -32855522 + (CA)n Simple_repeat Simple_repeat 2 62 0 231 224 15 90 chr17 56650274 56650341 -32854212 + MIR SINE MIR 16 77 -131 2083 120 10 3 chr17 56650395 56650694 -32853859 - AluSg SINE Alu -9 301 1 2510 59 3 13 chr17 56651569 56651875 -32852678 - AluY SINE Alu -8 303 1 561 279 7 0 chr17 56653010 56653164 -32851389 + AluSq SINE Alu 136 290 -23 2100 231 39 17 chr17 56653168 56653804 -32850749 + L1M4 LINE L1 4186 4835 -1311 3336 174 140 35 chr17 56653806 56654578 -32849975 - MER21B LTR ERV1 0 931 1 742 260 16 0 chr17 56654597 56654789 -32849764 + L1M4 LINE L1 4899 5093 -1053 203 175 0 0 chr17 56654789 56654829 -32849724 + T-rich Low_complexity Low_complexity 3 42 0 1027 117 0 0 chr17 56654846 56654983 -32849570 - AluJb SINE Alu -171 141 5 844 197 36 10 chr17 56655018 56655211 -32849342 + L1M4 LINE L1 5101 5298 -848 591 219 6 83 chr17 56655409 56655578 -32848975 + MER52A LTR ERV1 1078 1233 -522 536 266 31 79 chr17 56655915 56656144 -32848409 + MER52A LTR ERV1 1237 1454 -301 238 182 8 22 chr17 56656155 56656288 -32848265 + AluJb SINE Alu 58 279 -23 2928 132 5 2 chr17 56656532 56656978 -32847575 - L1MA5 LINE L1 0 6300 5854 1465 158 46 25 chr17 56657156 56657440 -32847113 + THE1C LTR MaLR 1 290 -85 336 342 42 8 chr17 56657671 56657791 -32846762 - MIR SINE MIR -85 177 54 704 226 36 12 chr17 56657849 56658017 -32846536 - L3 LINE CR1 -7 1570 1399 1848 129 3 64 chr17 56658839 56659150 -32845403 - AluSx SINE Alu -20 292 1 465 250 47 21 chr17 56659150 56659287 -32845266 - MIR SINE MIR -68 140 50 4538 110 3 3 chr17 56659402 56660004 -32844549 + LTR43 LTR ERV1 1 602 0 849 181 141 36 chr17 56660189 56660438 -32844115 + ORSL DNA AcHobo 1 275 0 292 258 40 147 chr17 56660715 56660763 -32843790 - MIR SINE MIR -76 186 135 1218 229 5 0 chr17 56660763 56660986 -32843567 + MER58A DNA MER1_type 1 224 0 292 258 40 147 chr17 56660986 56661135 -32843418 - MIR SINE MIR -127 135 10 258 350 38 51 chr17 56661959 56662116 -32842437 - MIR3 SINE MIR -52 156 2 459 278 119 7 chr17 56662858 56663009 -32841544 - MIR3 SINE MIR -1 207 40 214 184 0 0 chr17 56663580 56663628 -32840925 - MIR SINE MIR -109 153 107 386 273 195 24 chr17 56663859 56664064 -32840489 + MIR SINE MIR 20 259 -3 290 366 46 7 chr17 56664068 56664221 -32840332 - MIR SINE MIR -49 213 55 185 321 119 9 chr17 56665101 56665210 -32839343 - MIR3 SINE MIR -73 135 15 746 203 13 6 chr17 56665615 56665773 -32838780 - L1MC/D LINE L1 -766 5593 5435 360 211 14 164 chr17 56666032 56666240 -32838313 - L1MC/D LINE L1 -2029 5779 5603 683 240 0 0 chr17 56666240 56666369 -32838184 - FLAM_A SINE Alu -4 129 1 315 71 0 0 chr17 56666384 56666426 -32838127 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1067 171 130 82 chr17 56666439 56666708 -32837845 - AluJo SINE Alu -30 282 1 691 243 68 54 chr17 56666710 56666926 -32837627 - L1MC/D LINE L1 -2197 5611 5399 1782 181 7 3 chr17 56666926 56667229 -32837324 - AluSx SINE Alu -8 304 1 691 243 68 54 chr17 56667229 56667300 -32837253 - L1MC/D LINE L1 -2409 5399 5317 2324 157 18 13 chr17 56667300 56667688 -32836865 - MLT1B LTR MaLR 0 390 1 2307 181 18 3 chr17 56667689 56668070 -32836483 - MLT1B-int LTR MaLR -1 1370 984 2390 270 122 2 chr17 56668170 56669170 -32835383 + L2 LINE L2 2179 3313 0 6238 51 0 9 chr17 56669501 56670240 -32834313 + L1PA7 LINE L1 5419 6150 -4 728 96 92 5 chr17 56670297 56670324 -32834229 - L1MB1 LINE L1 -312 5809 5786 424 92 77 0 chr17 56670324 56670389 -32834164 - L1PA13 LINE L1 -5 6158 6089 728 96 92 5 chr17 56670389 56670551 -32834002 - L1MB1 LINE L1 -335 5786 5644 882 212 5 22 chr17 56670554 56670738 -32833815 + AluJo SINE Alu 17 197 -115 1736 181 37 0 chr17 56670844 56671192 -32833361 - Charlie5 DNA MER1_type -15 2597 2237 479 217 96 0 chr17 56671193 56671308 -32833245 - Charlie5 DNA MER1_type -2486 126 1 568 273 91 6 chr17 56671416 56671592 -32832961 - MIR SINE MIR -22 240 50 182 323 141 0 chr17 56671747 56671846 -32832707 + MIR SINE MIR 2 114 -148 230 268 207 0 chr17 56671849 56671931 -32832622 + L2 LINE L2 3214 3312 -1 318 271 14 0 chr17 56672298 56672368 -32832185 - MLT1K LTR MaLR -1 587 517 726 191 15 8 chr17 56672968 56673099 -32831454 - FLAM_C SINE Alu -10 133 2 1892 82 16 4 chr17 56673142 56673387 -32831166 - AluSg SINE Alu -62 248 1 204 264 69 0 chr17 56674937 56675009 -32829544 - MIR SINE MIR -3 259 183 2116 112 17 3 chr17 56675122 56675409 -32829144 - AluSq SINE Alu -22 291 1 238 100 0 0 chr17 56675713 56675753 -32828800 + MER41B LTR ERV1 509 548 -87 237 310 98 55 chr17 56676249 56676772 -32827781 - L2 LINE L2 -1491 1823 1279 200 261 0 0 chr17 56676828 56676893 -32827660 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 319 343 190 19 chr17 56676907 56677318 -32827235 - L2 LINE L2 0 3313 2833 237 343 48 52 chr17 56677372 56677582 -32826971 - L2 LINE L2 -563 2751 2543 219 329 100 0 chr17 56678581 56678651 -32825902 + L2 LINE L2 3013 3089 -224 538 232 142 0 chr17 56678665 56678820 -32825733 + MER93b LTR ERV1 1 177 -196 807 182 0 21 chr17 56678820 56678963 -32825590 - FLAM_C SINE Alu -2 141 2 340 292 31 56 chr17 56678967 56679128 -32825425 + L2 LINE L2 3156 3312 -1 184 333 0 0 chr17 56679431 56679494 -32825059 + L2 LINE L2 1341 1403 -1911 1141 249 22 63 chr17 56679505 56680011 -32824542 + HAL1 LINE L1 767 1251 -1256 1166 206 17 13 chr17 56680013 56680192 -32824361 - MSTD LTR MaLR 0 396 214 339 44 0 0 chr17 56680192 56680237 -32824316 + (TG)n Simple_repeat Simple_repeat 1 45 0 1166 206 17 13 chr17 56680237 56680290 -32824263 - MSTD LTR MaLR -182 214 163 24782 28 2 5 chr17 56680391 56683488 -32821065 + HERVK LTR ERVK 3612 6701 -542 318 279 150 46 chr17 56683780 56684060 -32820493 + L1ME LINE L1 524 832 -5238 1792 244 55 15 chr17 56684080 56684367 -32820186 + MLT1H LTR MaLR 52 367 -182 2038 146 0 7 chr17 56684367 56684675 -32819878 + AluSx SINE Alu 1 306 -6 1792 244 55 15 chr17 56684675 56684862 -32819691 + MLT1H LTR MaLR 367 545 -4 383 309 90 30 chr17 56684877 56685078 -32819475 + L1ME LINE L1 847 1059 -5011 416 251 48 98 chr17 56685090 56685248 -32819305 + L1ME LINE L1 1096 1260 -5001 2385 110 0 0 chr17 56685248 56685557 -32818996 + AluSq SINE Alu 1 309 -4 416 251 48 98 chr17 56685557 56685732 -32818821 + L1ME LINE L1 1260 1442 -4819 1657 112 12 8 chr17 56685732 56685990 -32818563 - L1PB1 LINE L1 0 6151 5893 416 251 48 98 chr17 56685990 56686062 -32818491 + L1ME LINE L1 1442 1516 -4745 1775 156 11 0 chr17 56686062 56686344 -32818209 + AluSx SINE Alu 4 288 -24 416 251 48 98 chr17 56686344 56686475 -32818078 + L1ME LINE L1 1516 1607 -4654 715 222 111 3 chr17 56686500 56686797 -32817756 + L1ME LINE L1 1730 2058 -4024 * 1805 246 43 37 chr17 56686770 56687636 -32816917 + L1ME LINE L1 2301 3171 -2909 2554 168 78 54 chr17 56688178 56688766 -32815787 + MER21A LTR ERV1 195 796 -135 21690 150 20 18 chr17 56688878 56691610 -32812943 + ERVL-B1 LTR ERVL 1944 4688 -1076 1701 216 17 3 chr17 56691610 56691966 -32812587 - MLT1A1 LTR MaLR 0 365 5 21690 150 20 18 chr17 56691966 56693039 -32811514 + ERVL-B1 LTR ERVL 4688 5757 -7 1327 125 14 5 chr17 56693040 56693248 -32811305 + MLT2B1 LTR ERVL 2 211 -309 703 192 23 0 chr17 56693248 56693378 -32811175 + FLAM_A SINE Alu 1 133 0 6336 71 12 2 chr17 56693757 56694641 -32809912 - HERVK LTR ERVK -6350 893 1 9178 13 1 0 chr17 56694641 56695609 -32808944 - LTR5 LTR ERVK 0 969 1 1784 80 0 0 chr17 56695609 56695848 -32808705 + HERVK11 LTR ERVK 4585 4823 -3130 227 159 23 0 chr17 56695952 56695996 -32808557 - MER94 DNA DNA -78 56 12 1122 263 66 25 chr17 56699180 56699587 -32804966 - LTR16A LTR ERVL 0 450 27 213 364 0 0 chr17 56699918 56699995 -32804558 - MER5A DNA MER1_type -53 136 60 344 250 133 83 chr17 56700544 56700784 -32803769 - L2 LINE L2 0 3313 3062 860 177 25 25 chr17 56700784 56700987 -32803566 + L1PA16 LINE L1 5961 6163 -3 802 228 46 55 chr17 56701170 56701389 -32803164 - MER20 DNA MER1_type -2 217 1 633 321 81 19 chr17 56701653 56702478 -32802075 - L1M4 LINE L1 -1480 4666 3791 735 254 40 29 chr17 56702582 56702929 -32801624 - MER69 DNA AcHobo -32 2494 2144 1488 300 37 9 chr17 56703032 56703180 -32801373 - MER69 DNA AcHobo -662 564 422 2323 147 86 0 chr17 56703180 56703574 -32800979 - MSTA LTR MaLR 0 428 1 1488 300 37 9 chr17 56703574 56703961 -32800592 - MER69 DNA AcHobo -804 422 14 22 0 0 0 chr17 56704526 56704548 -32800005 + AT_rich Low_complexity Low_complexity 1 22 0 2383 76 0 31 chr17 56704743 56705060 -32799493 - AluY SINE Alu -4 307 1 196 237 0 0 chr17 56705748 56705786 -32798767 - MER5A DNA MER1_type -23 166 129 1435 186 12 16 chr17 56706086 56706430 -32798123 + MER61C LTR ERV1 2 434 0 416 322 65 23 chr17 56706439 56706653 -32797900 + MIR SINE MIR 9 231 -31 398 296 62 73 chr17 56707132 56707406 -32797147 + MLT1K LTR MaLR 316 586 -2 322 359 84 28 chr17 56707408 56707695 -32796858 + L2 LINE L2 2939 3241 -31 298 257 10 20 chr17 56708534 56708635 -32795918 + (TA)n Simple_repeat Simple_repeat 1 100 0 330 26 0 0 chr17 56708635 56708674 -32795879 + (TG)n Simple_repeat Simple_repeat 2 40 0 268 279 59 44 chr17 56710009 56710145 -32794408 + MLT1H LTR MaLR 25 162 -387 561 310 90 20 chr17 56710601 56710901 -32793652 + LTR33 LTR ERVL 46 366 -155 21 36 0 0 chr17 56711206 56711234 -32793319 + AT_rich Low_complexity Low_complexity 1 28 0 2633 194 9 11 chr17 56711434 56712007 -32792546 - L1MB2 LINE L1 -7 6164 5593 807 205 51 20 chr17 56712013 56712306 -32792247 - L1MB2 LINE L1 -1556 4590 4289 4625 159 28 7 chr17 56712458 56713566 -32790987 + L1PB4 LINE L1 5027 6154 -2 471 180 0 11 chr17 56713979 56714068 -32790485 - FRAM SINE Alu -17 159 72 1563 162 23 3 chr17 56714133 56714436 -32790117 + L1PB4 LINE L1 5665 5973 -183 459 209 44 0 chr17 56714446 56714537 -32790016 - AluJ/FLAM SINE Alu -217 95 1 240 371 38 8 chr17 56714836 56714968 -32789585 + MLT1I LTR MaLR 70 205 -204 233 319 11 0 chr17 56715069 56715163 -32789390 + MLT1I LTR MaLR 315 409 0 183 288 233 0 chr17 56715726 56715799 -32788754 + L2 LINE L2 3168 3257 -15 200 340 50 30 chr17 56716757 56716857 -32787696 - L2 LINE L2 -22 3250 3149 192 77 0 0 chr17 56717020 56717046 -32787507 + (T)n Simple_repeat Simple_repeat 1 26 0 216 188 0 0 chr17 56717228 56717276 -32787277 + T-rich Low_complexity Low_complexity 1 48 0 7589 25 7 0 chr17 56717276 56718953 -32785600 - L1PA2 LINE L1 0 6155 4474 2912 20 0 0 chr17 56718953 56719303 -32785250 + L1PA2 LINE L1 4126 4475 -1671 243 293 41 81 chr17 56719599 56719722 -32784831 + MER5A DNA MER1_type 72 189 0 998 184 18 14 chr17 56719988 56720205 -32784348 + MLT2B3 LTR ERVL 3 220 -334 737 142 38 14 chr17 56720217 56720429 -32784124 + CT-rich Low_complexity Low_complexity 1 217 0 887 196 95 4 chr17 56720429 56720664 -32783889 + MLT2B3 LTR ERVL 222 515 -39 231 150 0 0 chr17 56720718 56720758 -32783795 + MLT2B3 LTR ERVL 466 505 -15 447 303 49 11 chr17 56721819 56722004 -32782549 + MIR SINE MIR 19 210 -52 241 329 106 24 chr17 56722273 56722443 -32782110 - MIR SINE MIR -13 249 66 261 79 0 0 chr17 56722808 56722846 -32781707 - MLT1H1 LTR MaLR -6 549 512 442 295 8 0 chr17 56723078 56723200 -32781353 - MLT1H1 LTR MaLR -432 123 1 183 129 0 0 chr17 56723604 56723635 -32780918 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 248 237 26 53 chr17 56724143 56724219 -32780334 - MER5A DNA MER1_type -81 108 35 * 291 271 0 14 chr17 56724165 56724235 -32780318 + MER5A DNA MER1_type 114 182 -7 340 80 147 80 chr17 56724271 56724346 -32780207 + MADE1 DNA Mariner 1 80 0 231 78 216 0 chr17 56724679 56724730 -32779823 - L1MA3 LINE L1 -1 6304 6243 8899 144 37 14 chr17 56724763 56726709 -32777844 - L1MA1 LINE L1 0 7721 5689 3048 33 11 0 chr17 56726709 56727071 -32777482 - L1PA3 LINE L1 -3 6152 5787 8899 144 37 14 chr17 56727071 56727911 -32776642 - L1MA1 LINE L1 -2032 5689 4870 6768 55 25 0 chr17 56727954 56728664 -32775889 - L1PA7 LINE L1 0 6154 5475 2288 94 0 31 chr17 56728664 56728984 -32775569 - AluY SINE Alu -1 310 1 6768 55 25 0 chr17 56728984 56729313 -32775240 - L1PA7 LINE L1 -679 5475 5156 3561 194 16 11 chr17 56729316 56730491 -32774062 - L1MA1 LINE L1 -3160 4405 3223 3234 120 12 10 chr17 56730592 56731168 -32773385 - L1MA1 LINE L1 -4805 2760 2184 1829 205 29 45 chr17 56731190 56731678 -32772875 - L1MA1 LINE L1 -7065 500 21 288 296 0 0 chr17 56732304 56732392 -32772161 - L1MC4 LINE L1 -30 8012 7925 657 138 0 0 chr17 56732515 56732631 -32771922 - L1MA7 LINE L1 -3 6288 6173 691 248 54 33 chr17 56732636 56732725 -32771828 - L1M2 LINE L1 -774 5517 5431 2316 116 37 6 chr17 56732725 56733078 -32771475 - THE1B LTR MaLR 0 364 1 691 248 54 33 chr17 56733078 56733230 -32771323 - L1M2 LINE L1 -860 5431 5271 1075 76 0 0 chr17 56733375 56733507 -32771046 + AluSp/q SINE Alu 167 298 -15 2642 108 32 25 chr17 56733512 56733955 -32770598 - Tigger2 DNA MER2_type 0 2718 2273 289 143 36 18 chr17 56733942 56733998 -32770555 - Tigger2 DNA MER2_type -2646 72 16 * 1024 94 0 0 chr17 56733998 56734136 -32770417 - MER85 DNA T2_type -1 138 1 206 288 50 0 chr17 56735981 56736061 -32768492 - MIR SINE MIR -6 256 173 540 296 17 22 chr17 56736116 56736295 -32768258 - MIR SINE MIR -76 186 9 841 133 21 0 chr17 56736662 56736805 -32767748 + MER50 LTR ERV1 1 146 -588 2009 170 0 0 chr17 56736805 56737111 -32767442 + AluSx SINE Alu 5 310 -2 707 141 8 8 chr17 56737112 56737240 -32767313 + MER50 LTR ERV1 323 450 -284 783 169 26 0 chr17 56737241 56737395 -32767158 + MER50-int LTR ERV1 1 158 -7047 * 4298 131 1 29 chr17 56737392 56738093 -32766460 + MER50-int LTR ERV1 267 948 -6257 198 0 0 0 chr17 56739159 56739181 -32765372 + (CA)n Simple_repeat Simple_repeat 2 23 0 480 299 106 0 chr17 56739586 56739771 -32764782 + MIR SINE MIR 35 242 -20 345 172 0 0 chr17 56740622 56740686 -32763867 + MLT1K LTR MaLR 515 578 -10 180 358 59 43 chr17 56741334 56741521 -32763032 + L2 LINE L2 2937 3126 -146 1447 212 5 72 chr17 56741532 56741923 -32762630 - MLT1A1 LTR MaLR 0 365 1 7529 25 7 3 chr17 56742351 56743353 -32761200 + L1PA3 LINE L1 5151 6155 0 1579 165 122 9 chr17 56743514 56743842 -32760711 + MLT1A1 LTR MaLR 1 365 0 318 264 56 0 chr17 56743857 56743929 -32760624 + L2 LINE L2 3197 3272 0 465 262 128 12 chr17 56744059 56744223 -32760330 + MIR SINE MIR 12 194 -68 297 264 25 16 chr17 56745213 56745334 -32759219 + MER103 DNA DNA 8 129 -37 5378 27 0 2 chr17 56745820 56746444 -32758109 + L1PA3 LINE L1 5533 6155 0 355 314 157 0 chr17 56746506 56746627 -32757926 - MER91C DNA MER1_type 0 140 1 183 158 0 53 chr17 56747476 56747514 -32757039 + L2 LINE L2 3267 3302 -11 1393 159 141 18 chr17 56748299 56748633 -32755920 + THE1C LTR MaLR 1 375 0 186 308 0 0 chr17 56748646 56748698 -32755855 + MIR SINE MIR 101 152 -110 632 350 48 37 chr17 56749144 56749624 -32754929 - L2 LINE L2 -277 2995 2514 436 365 25 21 chr17 56749698 56749939 -32754614 + MLT1I LTR MaLR 63 304 -105 1415 254 65 39 chr17 56749959 56750336 -32754217 + L1ME LINE L1 2683 3049 -3097 5621 45 1 0 chr17 56750336 56751017 -32753536 + L1PA5 LINE L1 5465 6146 -8 1415 254 65 39 chr17 56751017 56751453 -32753100 + L1ME LINE L1 3049 3517 -2629 9816 103 8 16 chr17 56751459 56753047 -32751506 - L1PA7 LINE L1 -1436 4710 3136 6590 69 9 9 chr17 56753048 56754483 -32750070 + L1PA7 LINE L1 4718 6153 -1 982 258 156 39 chr17 56754582 56755523 -32749030 + L1ME LINE L1 4718 5762 -402 369 300 20 10 chr17 56755565 56755665 -32748888 - MER5A DNA MER1_type -88 101 1 223 291 93 0 chr17 56755668 56755754 -32748799 + L2 LINE L2 3192 3285 -28 2260 179 7 129 chr17 56755995 56756278 -32748275 + L1MA4A LINE L1 5411 5727 -576 2274 101 7 0 chr17 56756278 56756576 -32747977 + AluSx SINE Alu 1 300 -12 342 0 0 0 chr17 56756576 56756614 -32747939 + (CA)n Simple_repeat Simple_repeat 2 39 0 2260 179 7 129 chr17 56756614 56757049 -32747504 + L1MA4A LINE L1 5725 6042 -261 * 2512 133 8 70 chr17 56756650 56757163 -32747390 + L1PB4 LINE L1 5676 6156 0 1555 188 40 17 chr17 56757230 56757355 -32747198 + AluJb SINE Alu 1 122 -190 312 27 0 0 chr17 56757355 56757392 -32747161 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1555 188 40 17 chr17 56757392 56757564 -32746989 + AluJb SINE Alu 122 305 -7 852 246 6 11 chr17 56757976 56758151 -32746402 - MER5A DNA MER1_type -2 187 14 253 264 74 66 chr17 56758130 56758251 -32746302 + L2 LINE L2 3150 3271 -1 * 207 171 0 0 chr17 56758255 56758290 -32746263 + (TG)n Simple_repeat Simple_repeat 2 36 0 282 330 167 50 chr17 56759178 56759496 -32745057 - L2 LINE L2 -4 3268 2914 577 370 64 39 chr17 56759618 56760053 -32744500 + L2 LINE L2 2810 3255 -17 240 327 48 10 chr17 56760126 56760230 -32744323 - MIR SINE MIR -71 191 84 463 274 0 51 chr17 56760721 56760838 -32743715 - L2 LINE L2 -18 3295 3185 192 319 92 67 chr17 56761201 56761712 -32742841 - L2 LINE L2 -1549 1765 1242 1597 232 20 0 chr17 56762591 56762944 -32741609 + MLT1A1 LTR MaLR 6 365 0 558 216 75 0 chr17 56762944 56763101 -32741452 - MLT1B LTR MaLR -16 378 194 492 268 56 24 chr17 56763130 56763317 -32741236 - MLT1B LTR MaLR -187 187 1 310 333 0 42 chr17 56763798 56763894 -32740659 - MIR3 SINE MIR -111 97 6 503 304 120 14 chr17 56764016 56764233 -32740320 - MIR SINE MIR -18 244 5 274 342 48 93 chr17 56765636 56766126 -32738427 + L2 LINE L2 2769 3235 -37 274 232 79 31 chr17 56766307 56766445 -32738108 - MLT1H LTR MaLR -16 526 382 1887 279 114 9 chr17 56766456 56767133 -32737420 + L2 LINE L2 1414 2161 -1153 5220 143 12 9 chr17 56767135 56768448 -32736105 - L1PA15 LINE L1 -5 6160 4827 291 183 14 0 chr17 56768448 56768519 -32736034 + L1 LINE L1 3432 3503 -2643 5924 189 20 8 chr17 56768568 56769853 -32734700 + L1P LINE L1 3487 4787 -1359 427 283 0 0 chr17 56770095 56770208 -32734345 - MER117 DNA MER1_type -84 113 1 298 383 23 0 chr17 56770737 56770865 -32733688 + MIR3 SINE MIR 54 184 -24 183 403 47 0 chr17 56770901 56771030 -32733523 - MIR SINE MIR -98 164 30 377 270 163 10 chr17 56771220 56771509 -32733044 - L1ME3A LINE L1 -200 5970 5638 244 236 0 0 chr17 56771585 56771640 -32732913 - L1ME3A LINE L1 -636 5526 5472 801 258 143 31 chr17 56771768 56771916 -32732637 - L1ME3A LINE L1 -1181 4965 4835 2179 146 8 27 chr17 56771916 56772286 -32732267 + THE1B LTR MaLR 1 363 -1 801 258 143 31 chr17 56772286 56772839 -32731714 - L1ME3A LINE L1 -1311 4835 4186 389 242 145 30 chr17 56772851 56773182 -32731371 - L1ME3A LINE L1 -2025 4121 3753 200 125 21 62 chr17 56773182 56773230 -32731323 + CT-rich Low_complexity Low_complexity 5 50 0 1257 230 53 43 chr17 56773531 56773949 -32730604 + LTR9 LTR ERV1 191 612 0 1510 109 78 8 chr17 56773949 56774205 -32730348 + MSTA LTR MaLR 151 424 -4 292 322 55 33 chr17 56774831 56775014 -32729539 - ERVL LTR ERVL -1867 3618 3432 535 357 41 21 chr17 56775055 56775259 -32729294 - ERVL LTR ERVL -2278 3376 3159 1006 195 14 41 chr17 56775259 56775480 -32729073 + MER20 DNA MER1_type 1 215 -4 535 357 41 21 chr17 56775480 56775662 -32728891 - ERVL LTR ERVL -2495 3159 2982 764 301 75 55 chr17 56775910 56776482 -32728071 - ERVL LTR ERVL -3028 2626 2040 806 276 0 0 chr17 56776482 56776656 -32727897 - MER96 DNA MER1_type 0 175 2 764 301 75 55 chr17 56776656 56776687 -32727866 - ERVL LTR ERVL -3614 2040 2011 195 100 0 0 chr17 56776927 56776957 -32727596 + (TCTCCC)n Simple_repeat Simple_repeat 6 35 0 554 261 116 6 chr17 56777369 56777680 -32726873 + Charlie2a DNA MER1_type 1509 1853 -1009 526 239 17 0 chr17 56777746 56777863 -32726690 - MER96 DNA MER1_type? -6 169 51 796 258 54 76 chr17 56777893 56778076 -32726477 + Charlie2a DNA MER1_type 1948 2133 -729 369 0 0 0 chr17 56778076 56778117 -32726436 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 258 54 76 chr17 56778117 56778263 -32726290 + Charlie2a DNA MER1_type 2133 2281 -581 2382 198 43 4 chr17 56778263 56778749 -32725804 - MLT1D LTR MaLR 0 505 1 796 258 54 76 chr17 56778749 56779337 -32725216 + Charlie2a DNA MER1_type 2281 2846 -16 235 185 86 62 chr17 56779473 56779554 -32724999 + MIR SINE MIR 110 192 -70 23 0 0 0 chr17 56780861 56780884 -32723669 + AT_rich Low_complexity Low_complexity 1 23 0 1437 195 24 27 chr17 56783660 56783988 -32720565 + L1 LINE L1 4717 5043 -1103 7899 162 11 10 chr17 56783999 56786264 -32718289 + L1PA12 LINE L1 3849 6107 -61 842 110 0 22 chr17 56786264 56786400 -32718153 + L1PA13 LINE L1 6031 6163 0 14806 51 16 1 chr17 56786408 56789055 -32715498 + L1PA6 LINE L1 3492 6154 0 604 253 32 46 chr17 56789888 56790173 -32714380 - L1ME4a LINE L1 -238 5883 5603 275 248 51 29 chr17 56790617 56790754 -32713799 - L1ME4a LINE L1 -49 6072 5933 920 50 121 0 chr17 56791157 56791298 -32713255 + L1P LINE L1 5246 5403 -743 2204 111 16 50 chr17 56791510 56791887 -32712666 - THE1B LTR MaLR 0 364 1 568 289 94 42 chr17 56792195 56792587 -32711966 - L1ME4a LINE L1 -431 5739 5328 222 380 79 13 chr17 56792622 56792851 -32711702 + L2 LINE L2 2647 2890 -424 2746 73 3 6 chr17 56792859 56793215 -32711338 + THE1A LTR MaLR 1 355 0 11125 105 7 7 chr17 56793215 56794795 -32709758 + THE1A-int LTR MaLR 1 1580 0 2604 80 3 6 chr17 56794797 56795148 -32709405 + THE1A LTR MaLR 3 352 -3 185 237 0 51 chr17 56795405 56795464 -32709089 + L2 LINE L2 3216 3271 -1 524 47 0 0 chr17 56796687 56796751 -32707802 - L1PA4 LINE L1 -67 6088 6025 543 66 0 0 chr17 56796751 56796826 -32707727 + L1PA4 LINE L1 6080 6155 0 1329 258 106 13 chr17 56797724 56798279 -32706274 - MLT2E LTR ERVL 0 628 1 2131 290 92 45 chr17 56798296 56799440 -32705113 - ERVL-E LTR ERVL -11 5753 4557 2994 288 80 20 chr17 56799481 56800621 -32703932 - ERVL-E LTR ERVL -2986 2778 1571 390 316 46 11 chr17 56800624 56800798 -32703755 + MLT2F LTR ERVL 37 216 -447 425 365 20 0 chr17 56800906 56801109 -32703444 + MLT2F LTR ERVL 457 663 0 1105 343 28 43 chr17 56801131 56802311 -32702242 - ERVL-E LTR ERVL -4224 1540 310 2283 116 9 0 chr17 56802536 56802853 -32701700 - L1PA13 LINE L1 -192 5971 5649 546 84 0 42 chr17 56802853 56802948 -32701605 - L1PA6 LINE L1 0 6154 6064 2283 116 9 0 chr17 56802948 56802976 -32701577 - L1PA13 LINE L1 -514 5649 5623 1149 71 0 30 chr17 56802976 56803143 -32701410 + L1PA13 LINE L1 5995 6158 -5 560 314 19 6 chr17 56803197 56803476 -32701077 - MLT2E LTR ERVL 0 628 265 878 268 29 4 chr17 56803477 56803723 -32700830 - MLT1E1 LTR MaLR 0 654 403 474 245 9 11 chr17 56803757 56803980 -32700573 - MLT1E1 LTR MaLR -383 271 2 769 232 26 103 chr17 56803989 56804261 -32700292 - MLT2E LTR ERVL -368 260 10 21 36 0 0 chr17 56804340 56804368 -32700185 + AT_rich Low_complexity Low_complexity 1 28 0 305 343 17 19 chr17 56804864 56805012 -32699541 + MIR SINE MIR 22 167 -70 5134 143 38 31 chr17 56805572 56805805 -32698748 + MER49 LTR ERV1 1 231 -692 2270 98 0 0 chr17 56805805 56806101 -32698452 + AluSx SINE Alu 1 296 -16 5134 143 38 31 chr17 56806101 56806359 -32698194 + MER49 LTR ERV1 231 486 -437 2176 116 3 19 chr17 56806359 56806669 -32697884 + AluSp SINE Alu 1 305 -8 5134 143 38 31 chr17 56806669 56807074 -32697479 + MER49 LTR ERV1 486 904 -19 210 338 166 29 chr17 56807154 56807462 -32697091 + L2 LINE L2 2133 2482 -832 637 315 67 4 chr17 56808083 56808350 -32696203 - L2 LINE L2 -177 3136 2853 793 233 0 0 chr17 56808454 56808604 -32695949 + AluJb SINE Alu 134 283 -29 370 330 89 22 chr17 56808698 56808877 -32695676 - L1MEc LINE L1 -2596 3533 3343 1136 267 93 26 chr17 56808881 56809600 -32694953 - L1MEc LINE L1 -2820 3309 2543 848 261 188 26 chr17 56809617 56810000 -32694553 - LTR16A1 LTR ERVL 0 457 13 591 284 73 9 chr17 56810030 56810372 -32694181 - L1MEc LINE L1 -3616 2513 2150 3052 200 35 31 chr17 56810393 56811102 -32693451 - L1MB5 LINE L1 -8 6166 5455 550 296 27 34 chr17 56811563 56812014 -32692539 - L1MEc LINE L1 -4556 1653 1218 273 285 31 47 chr17 56812116 56812309 -32692244 - L1MEc LINE L1 -5040 1079 890 324 369 0 25 chr17 56813148 56813305 -32691248 - L2 LINE L2 -771 2543 2391 368 290 102 17 chr17 56813473 56813649 -32690904 + MIR SINE MIR 59 249 -13 1737 114 12 8 chr17 56813901 56814199 -32690354 - AluSc SINE Alu 0 344 46 336 103 0 0 chr17 56814550 56814608 -32689945 + (TG)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr17 56814684 56814706 -32689847 + AT_rich Low_complexity Low_complexity 1 22 0 241 192 51 0 chr17 56814847 56814925 -32689628 + (TA)n Simple_repeat Simple_repeat 2 83 0 189 0 0 0 chr17 56814925 56814946 -32689607 + (CA)n Simple_repeat Simple_repeat 2 22 0 24 53 0 0 chr17 56815457 56815495 -32689058 + AT_rich Low_complexity Low_complexity 1 38 0 183 309 162 0 chr17 56815787 56815855 -32688698 - L2 LINE L2 0 3272 3194 319 337 87 36 chr17 56816027 56816411 -32688142 - L2 LINE L2 -273 2999 2601 197 350 62 0 chr17 56816503 56816600 -32687953 - MIR SINE MIR -99 163 61 212 57 0 29 chr17 56816717 56816752 -32687801 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 2357 30 0 0 chr17 56816752 56817023 -32687530 - L1PA3 LINE L1 -24 6131 5861 274 283 150 0 chr17 56817076 56817189 -32687364 - L2 LINE L2 -1 3312 3183 2696 184 37 12 chr17 56817189 56817674 -32686879 + MER54B LTR ERVL 1 497 -296 228 122 0 0 chr17 56817679 56817720 -32686833 + (GA)n Simple_repeat Simple_repeat 2 42 0 777 171 4 151 chr17 56817723 56817975 -32686578 + MER54B LTR ERVL 468 682 -111 330 296 87 104 chr17 56818009 56818364 -32686189 - L2 LINE L2 -106 3207 2859 * 1818 296 80 25 chr17 56818349 56819200 -32685353 - L2 LINE L2 -806 2508 1611 497 304 93 42 chr17 56819309 56819546 -32685007 - MIR SINE MIR -8 254 6 195 344 62 0 chr17 56819856 56819920 -32684633 - L2 LINE L2 -38 3275 3208 208 191 0 0 chr17 56822219 56822266 -32682287 - L2 LINE L2 -658 2656 2610 383 204 9 0 chr17 56822343 56822428 -32682125 - MER5A DNA MER1_type -100 89 4 493 299 5 82 chr17 56822498 56822551 -32682002 - MER5B DNA MER1_type -1 177 122 2326 109 0 0 chr17 56822551 56822862 -32681691 + AluY SINE Alu 1 311 0 493 299 5 82 chr17 56822862 56822992 -32681561 - MER5B DNA MER1_type -56 122 8 194 319 186 9 chr17 56823257 56823370 -32681183 + L2 LINE L2 3139 3271 -1 348 176 0 0 chr17 56823644 56823712 -32680841 + (TA)n Simple_repeat Simple_repeat 1 68 0 557 278 67 26 chr17 56823716 56823910 -32680643 - MIR SINE MIR -58 204 3 1601 211 109 142 chr17 56823973 56824939 -32679614 - LTR1B LTR ERV1 0 1020 1 317 355 55 73 chr17 56825159 56825666 -32678887 + L2 LINE L2 1697 2194 -1120 2455 173 14 7 chr17 56825668 56826091 -32678462 - MSTB LTR MaLR 0 426 1 31 58 0 0 chr17 56826418 56826470 -32678083 + AT_rich Low_complexity Low_complexity 1 52 0 311 364 43 76 chr17 56826657 56827102 -32677451 + L2 LINE L2 2828 3257 -15 1196 34 0 7 chr17 56827649 56827796 -32676757 - L1PA10 LINE L1 -3 6165 6020 357 234 18 81 chr17 56828070 56828181 -32676372 - MIR3 SINE MIR -11 197 94 438 271 150 39 chr17 56830314 56830521 -32674032 - MIR SINE MIR -25 237 8 1125 229 74 68 chr17 56831068 56831149 -32673404 + MLT1C LTR MaLR 6 85 -382 1835 138 31 57 chr17 56831149 56831534 -32673019 + THE1C LTR MaLR 1 375 0 1125 229 74 68 chr17 56831534 56831911 -32672642 + MLT1C LTR MaLR 85 467 0 398 299 42 61 chr17 56832863 56833077 -32671476 - MIR SINE MIR -6 256 47 2112 278 191 35 chr17 56834134 56835262 -32669291 + L2 LINE L2 1481 2785 -529 2076 178 50 24 chr17 56835559 56835981 -32668572 - Tigger2a DNA MER2_type 0 434 2 2174 116 3 0 chr17 56836370 56836663 -32667890 - AluSx SINE Alu -16 296 3 335 264 8 0 chr17 56837184 56837305 -32667248 + (TTTA)n Simple_repeat Simple_repeat 4 125 0 24 0 0 0 chr17 56837549 56837573 -32666980 + AT_rich Low_complexity Low_complexity 1 24 0 284 279 109 7 chr17 56839127 56839274 -32665279 - MIR SINE MIR -5 257 96 215 306 0 0 chr17 56839327 56839376 -32665177 + (CA)n Simple_repeat Simple_repeat 2 50 0 247 205 0 39 chr17 56839393 56839471 -32665082 + L1MC5 LINE L1 7454 7528 -433 394 271 89 86 chr17 56839627 56839952 -32664601 - HAL1b LINE L1 -731 617 292 28 48 0 0 chr17 56839990 56840032 -32664521 + AT_rich Low_complexity Low_complexity 1 42 0 1681 278 78 25 chr17 56840225 56840740 -32663813 - MLT1F LTR MaLR 0 542 1 3213 158 86 2 chr17 56842231 56842718 -32661835 - L1P LINE L1 -1950 4196 3651 279 0 0 0 chr17 56842718 56842749 -32661804 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3213 158 86 2 chr17 56842749 56842844 -32661709 - L1P LINE L1 -2495 3651 3565 2038 125 0 6 chr17 56842855 56843182 -32661371 + L1P LINE L1 5024 5348 -798 25 0 0 0 chr17 56843679 56843704 -32660849 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr17 56843768 56843789 -32660764 + AT_rich Low_complexity Low_complexity 1 21 0 899 245 61 23 chr17 56844310 56844571 -32659982 + MLT1C LTR MaLR 4 274 -193 376 336 57 52 chr17 56845270 56845498 -32659055 + MLT1J1 LTR MaLR 40 272 -174 2426 222 52 8 chr17 56845498 56846096 -32658457 + MLT1E3 LTR MaLR 1 624 0 376 336 57 52 chr17 56846096 56846272 -32658281 + MLT1J1 LTR MaLR 272 446 0 773 179 0 8 chr17 56846936 56847070 -32657483 + FRAM SINE Alu 1 130 -46 422 118 0 29 chr17 56847114 56847182 -32657371 - LTR66 LTR ERVL 0 610 545 1875 99 63 56 chr17 56847342 56847644 -32656909 - AluSg SINE Alu -6 304 1 1364 172 53 63 chr17 56847700 56848014 -32656539 + AluJb SINE Alu 1 311 0 2856 175 9 14 chr17 56848512 56849065 -32655488 - L1PA16 LINE L1 -8 6158 5609 380 265 20 31 chr17 56849315 56849413 -32655140 - MER5A DNA MER1_type -84 105 9 845 234 81 54 chr17 56849472 56849734 -32654819 - MLT1A2 LTR MaLR -15 452 163 1770 151 0 14 chr17 56849734 56850025 -32654528 - AluJb SINE Alu -25 287 1 845 234 81 54 chr17 56850025 56850192 -32654361 - MLT1A2 LTR MaLR -304 163 2 832 209 0 0 chr17 56850424 56850596 -32653957 - L1 LINE L1 -1058 5088 4917 2433 106 198 96 chr17 56850603 56851178 -32653375 + L1PB3 LINE L1 5520 6153 -1 23 0 0 0 chr17 56851178 56851201 -32653352 + AT_rich Low_complexity Low_complexity 1 23 0 1677 147 0 63 chr17 56851205 56851534 -32653019 + AluSx SINE Alu 3 312 0 34 24 0 0 chr17 56851534 56851575 -32652978 + AT_rich Low_complexity Low_complexity 1 41 0 186 231 215 46 chr17 56852369 56852499 -32652054 - MIR SINE MIR -12 250 99 660 214 0 8 chr17 56852544 56852670 -32651883 + MER58B DNA MER1_type 217 341 0 542 361 14 18 chr17 56852747 56852966 -32651587 + MIR SINE MIR 26 243 -19 2151 117 3 0 chr17 56854277 56854586 -32649967 - AluSg SINE Alu 0 310 1 2484 95 27 5 chr17 56854746 56855113 -32649440 + THE1C LTR MaLR 1 375 0 2756 250 67 53 chr17 56855171 56856382 -32648171 - L1MEc LINE L1 -2462 3753 2518 2072 136 3 0 chr17 56856382 56856690 -32647863 - AluSx SINE Alu -2 310 2 2756 250 67 53 chr17 56856690 56856875 -32647678 - L1MEc LINE L1 -3697 2518 2337 25 65 0 0 chr17 56856913 56856959 -32647594 + AT_rich Low_complexity Low_complexity 1 46 0 485 267 89 27 chr17 56856979 56857335 -32647218 - L1MEc LINE L1 -4068 2328 1920 30 27 0 0 chr17 56857342 56857379 -32647174 + AT_rich Low_complexity Low_complexity 1 37 0 2045 148 0 0 chr17 56857704 56858009 -32646544 - AluSx SINE Alu -7 305 1 1147 49 0 0 chr17 56859078 56859221 -32645332 + L1PA4 LINE L1 6010 6152 -3 1328 232 106 59 chr17 56860608 56861140 -32643413 + MLT1F1 LTR MaLR 11 567 0 239 316 165 0 chr17 56861750 56861883 -32642670 + MIR SINE MIR 76 230 -32 21 0 0 0 chr17 56861944 56861965 -32642588 + AT_rich Low_complexity Low_complexity 1 21 0 486 0 0 0 chr17 56862318 56862372 -32642181 + (TA)n Simple_repeat Simple_repeat 1 54 0 260 274 89 32 chr17 56863486 56863610 -32640943 - MIR SINE MIR -50 212 82 408 248 86 89 chr17 56863785 56864117 -32640436 + MLT1I LTR MaLR 66 424 -22 1244 319 98 18 chr17 56864368 56865050 -32639503 + MER45C DNA AcHobo 1 779 -174 1350 205 39 7 chr17 56865159 56865466 -32639087 + MER45B DNA AcHobo 716 1032 -8 240 59 0 0 chr17 56865492 56865526 -32639027 + (A)n Simple_repeat Simple_repeat 1 34 0 716 302 36 3 chr17 56866907 56867215 -32637338 + MER45B DNA AcHobo 716 1033 -7 288 0 0 0 chr17 56867240 56867272 -32637281 + (A)n Simple_repeat Simple_repeat 1 32 0 227 331 83 18 chr17 56868266 56868435 -32636118 + MLT1I LTR MaLR 139 318 -91 26 0 0 0 chr17 56868580 56868606 -32635947 + AT_rich Low_complexity Low_complexity 1 26 0 285 327 33 57 chr17 56869994 56870205 -32634348 + MLT1I LTR MaLR 196 401 -8 36 0 0 0 chr17 56870365 56870401 -32634152 + AT_rich Low_complexity Low_complexity 1 36 0 307 309 71 8 chr17 56870422 56870548 -32634005 + MIR SINE MIR 74 207 -55 487 305 143 0 chr17 56871044 56871247 -32633306 + MIR SINE MIR 31 262 0 2336 189 14 5 chr17 56871495 56871929 -32632624 - Tigger2 DNA MER2_type -1 2717 2280 391 143 14 14 chr17 56871926 56871996 -32632557 + MER8 DNA MER2_type 170 239 0 * 238 254 15 30 chr17 56872211 56872278 -32632275 - L2 LINE L2 -47 3225 3160 24 0 0 0 chr17 56872645 56872669 -32631884 + AT_rich Low_complexity Low_complexity 1 24 0 201 398 0 0 chr17 56873169 56873252 -32631301 + MIR SINE MIR 43 125 -83 508 318 101 28 chr17 56873415 56873872 -32630681 + L1ME4a LINE L1 5512 6011 -110 1937 150 53 29 chr17 56873872 56874251 -32630302 + MLT1B LTR MaLR 1 388 -2 508 318 101 28 chr17 56874251 56874297 -32630256 + L1ME4a LINE L1 6011 6052 -69 881 221 0 53 chr17 56875975 56876183 -32628370 - MER3 DNA MER1_type -7 202 6 306 138 0 0 chr17 56876736 56876794 -32627759 + (GA)n Simple_repeat Simple_repeat 2 59 0 299 273 0 23 chr17 56876844 56876932 -32627621 + LTR33 LTR ERVL 14 99 -422 416 286 27 7 chr17 56877111 56877258 -32627295 + LTR33 LTR ERVL 366 515 -6 770 219 21 16 chr17 56877589 56877776 -32626777 + MER5A DNA MER1_type 2 189 0 313 309 49 64 chr17 56878014 56878402 -32626151 - L1M4 LINE L1 -825 5321 4940 7474 35 1 1 chr17 56879036 56880466 -32624087 - L1PA5 LINE L1 0 6154 4723 1965 127 52 25 chr17 56880532 56880895 -32623658 + THE1C LTR MaLR 1 373 -2 237 315 111 33 chr17 56881850 56882031 -32622522 - MIR SINE MIR -56 206 12 238 298 95 0 chr17 56882153 56882237 -32622316 - MER5A DNA MER1_type -86 103 12 470 333 169 22 chr17 56882474 56882918 -32621635 + L2 LINE L2 385 893 -2421 300 289 30 15 chr17 56884424 56884621 -32619932 - MER113 DNA MER1_type? -321 200 1 277 224 53 13 chr17 56884906 56884982 -32619571 + MLT1E LTR MaLR 51 129 -464 616 284 64 39 chr17 56885047 56885251 -32619302 + MLT1E LTR MaLR 201 409 -184 2297 132 24 16 chr17 56885253 56885625 -32618928 + THE1C LTR MaLR 1 375 0 9617 113 8 61 chr17 56885625 56887292 -32617261 + THE1C-int LTR MaLR 1 1580 0 2244 110 73 17 chr17 56887292 56887647 -32616906 + THE1C LTR MaLR 1 375 0 568 260 37 0 chr17 56887652 56887823 -32616730 + MLT1E1 LTR MaLR 412 652 -2 210 321 45 22 chr17 56888009 56888143 -32616410 - MIR SINE MIR -4 258 122 321 290 6 83 chr17 56888408 56888577 -32615976 + MLT1K LTR MaLR 374 529 -59 265 341 12 12 chr17 56888795 56888880 -32615673 - MIR SINE MIR -108 100 16 369 0 0 0 chr17 56889874 56889915 -32614638 + (TG)n Simple_repeat Simple_repeat 2 42 0 293 270 70 0 chr17 56890503 56890603 -32613950 + LTR16A1 LTR ERVL 168 274 -183 975 163 0 0 chr17 56890615 56890793 -32613760 - MER3 DNA MER1_type -30 179 2 337 271 100 36 chr17 56891496 56891636 -32612917 - MIR SINE MIR 0 262 114 515 184 178 53 chr17 56893174 56893326 -32611227 - MIR SINE MIR -89 173 3 476 354 62 17 chr17 56893701 56894133 -32610420 + L2 LINE L2 2538 3053 -260 1162 182 5 20 chr17 56894288 56894491 -32610062 + AluJb SINE Alu 87 286 -26 234 105 0 0 chr17 56894491 56894529 -32610024 + (CA)n Simple_repeat Simple_repeat 2 39 0 254 239 54 76 chr17 56894531 56894623 -32609930 + L2 LINE L2 3182 3271 -1 450 271 14 21 chr17 56894683 56894827 -32609726 - MIR SINE MIR -10 252 110 378 0 0 0 chr17 56894904 56894946 -32609607 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr17 56895452 56895480 -32609073 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 56895790 56895813 -32608740 + AT_rich Low_complexity Low_complexity 1 23 0 185 265 0 20 chr17 56896261 56896310 -32608243 + MER5B DNA MER1_type 111 158 -20 324 278 56 8 chr17 56898503 56898629 -32605924 - MER94 DNA DNA -1 133 2 267 270 66 13 chr17 56898963 56899115 -32605438 - MER112 DNA MER1_type -13 247 88 2278 104 0 0 chr17 56899609 56899908 -32604645 + AluSg SINE Alu 1 299 -11 326 80 20 0 chr17 56900226 56900276 -32604277 + (GA)n Simple_repeat Simple_repeat 1 51 0 367 289 119 6 chr17 56900669 56900828 -32603725 - MER5B DNA MER1_type -1 177 1 203 171 0 0 chr17 56901364 56901399 -32603154 + L2 LINE L2 3271 3305 -8 2046 145 3 3 chr17 56901453 56901756 -32602797 + AluSx SINE Alu 1 303 -9 354 312 0 21 chr17 56902238 56902379 -32602174 + CT-rich Low_complexity Low_complexity 2 139 0 311 293 93 20 chr17 56902693 56902843 -32601710 - MIR SINE MIR -24 238 78 28 0 0 0 chr17 56902861 56902889 -32601664 + AT_rich Low_complexity Low_complexity 1 28 0 292 275 106 14 chr17 56902960 56903102 -32601451 - MIR SINE MIR -5 257 103 218 308 70 42 chr17 56903324 56903467 -32601086 + MIR SINE MIR 8 154 -108 434 130 0 0 chr17 56903655 56903724 -32600829 - LTR12 LTR ERV1 0 714 646 36548 111 23 15 chr17 56903772 56909520 -32595033 + HERV9 LTR ERV1 58 5851 -2548 8042 118 6 12 chr17 56909514 56910797 -32593756 + HERV9 LTR ERV1 7125 8399 0 * 923 182 132 27 chr17 56910797 56911055 -32593498 + LTR12 LTR ERV1 1 285 -429 321 183 0 0 chr17 56911056 56911127 -32593426 + LTR30 LTR ERV1 553 623 -99 690 168 25 0 chr17 56911128 56911247 -32593306 + LTR12 LTR ERV1 359 480 -234 431 165 0 22 chr17 56912799 56912890 -32591663 + (CATA)n Simple_repeat Simple_repeat 2 90 0 404 164 0 0 chr17 56914619 56914701 -32589852 - L1MA4 LINE L1 -36 6267 6185 258 328 105 12 chr17 56915929 56916100 -32588453 + MER117 DNA MER1_type 10 196 -1 264 257 14 0 chr17 56916651 56916725 -32587828 - L1MC5 LINE L1 -74 7887 7813 1954 173 29 9 chr17 56916806 56917251 -32587302 - L1MB7 LINE L1 0 6184 5731 2675 164 20 63 chr17 56917251 56917476 -32587077 - L1MA4A LINE L1 -87 6216 5983 2060 119 30 7 chr17 56917476 56917778 -32586775 + AluSc SINE Alu 1 309 0 2675 164 20 63 chr17 56917778 56918204 -32586349 - L1MA4A LINE L1 -320 5983 5593 3829 136 44 35 chr17 56918247 56918995 -32585558 - L1MA3 LINE L1 0 7724 6970 6011 178 13 47 chr17 56918996 56920436 -32584117 - L1MA3 LINE L1 -897 6668 5277 * 15332 178 31 8 chr17 56920434 56922683 -32581870 - L1MA3 LINE L1 -2507 5058 2862 441 0 0 0 chr17 56922683 56922732 -32581821 + (TG)n Simple_repeat Simple_repeat 2 50 0 15332 178 31 8 chr17 56922732 56922743 -32581810 - L1MA3 LINE L1 -4703 2862 2853 2105 84 11 0 chr17 56922743 56923006 -32581547 - AluY SINE Alu -45 266 1 15332 178 31 8 chr17 56923006 56924933 -32579620 - L1MA3 LINE L1 -4712 2853 769 22079 153 11 9 chr17 56924935 56928663 -32575890 + HERVE LTR ERV1 1655 5387 -2426 244 263 175 26 chr17 56928952 56929066 -32575487 + MIR SINE MIR 120 250 -12 262 256 22 0 chr17 56929070 56929160 -32575393 + MER103 DNA DNA 60 151 -15 363 272 96 100 chr17 56930377 56930497 -32574056 + L1ME4a LINE L1 5635 5754 -367 868 127 16 0 chr17 56930497 56930623 -32573930 + FLAM_C SINE Alu 1 128 -5 363 272 96 100 chr17 56930623 56930980 -32573573 + L1ME4a LINE L1 5754 6110 -11 181 345 130 24 chr17 56931070 56931316 -32573237 + L2 LINE L2 1721 1992 -1322 223 333 54 34 chr17 56931375 56931522 -32573031 + L2 LINE L2 3164 3313 0 2913 135 56 48 chr17 56931649 56932169 -32572384 - MER1A DNA MER1_type 0 527 4 193 29 59 0 chr17 56933410 56933444 -32571109 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 313 293 77 66 chr17 56933626 56933657 -32570896 - MIR SINE MIR -15 247 218 1830 128 78 31 chr17 56933657 56934015 -32570538 - THE1C LTR MaLR 0 375 1 313 293 77 66 chr17 56934015 56934164 -32570389 - MIR SINE MIR -44 218 65 282 226 195 32 chr17 56934557 56934747 -32569806 - HAL1 LINE L1 -1485 1022 802 462 300 38 42 chr17 56935117 56935380 -32569173 - HAL1 LINE L1 -2081 426 165 813 293 65 32 chr17 56935665 56935690 -32568863 + MLT1A2 LTR MaLR 23 46 -328 1941 118 73 20 chr17 56935690 56936046 -32568507 - THE1C LTR MaLR 0 375 1 813 293 65 32 chr17 56936046 56936361 -32568192 + MLT1A2 LTR MaLR 46 374 0 401 285 47 47 chr17 56936362 56936534 -32568019 + MLT1J2 LTR MaLR 272 443 -7 1914 131 23 81 chr17 56937685 56937870 -32566683 + THE1C LTR MaLR 1 152 -223 1897 128 7 14 chr17 56937870 56938158 -32566395 + AluSx SINE Alu 3 288 -24 1914 131 23 81 chr17 56938158 56938369 -32566184 + THE1C LTR MaLR 152 374 -1 23 0 0 0 chr17 56938849 56938872 -32565681 + AT_rich Low_complexity Low_complexity 1 23 0 308 231 94 17 chr17 56940670 56940787 -32563766 - L1ME1 LINE L1 -5 6161 6036 211 235 49 62 chr17 56943199 56943280 -32561273 - MIR SINE MIR -14 248 169 324 0 0 0 chr17 56944443 56944479 -32560074 + (TC)n Simple_repeat Simple_repeat 1 36 0 306 0 0 0 chr17 56944478 56944512 -32560041 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 458 339 17 23 chr17 56944527 56944704 -32559849 - MER5B DNA MER1_type -1 177 2 542 258 152 0 chr17 56944717 56944868 -32559685 - MER5A DNA MER1_type -6 183 10 8921 25 0 0 chr17 56944889 56945935 -32558618 - L1PA3 LINE L1 -1564 4582 3537 7614 21 2 4 chr17 56945935 56947521 -32557032 + L1PA3 LINE L1 4572 6155 0 818 94 15 11 chr17 56947548 56947674 -32556879 - MLT2A2 LTR ERVL 0 453 336 884 121 99 161 chr17 56947675 56947948 -32556605 + LTR12 LTR ERV1 22 277 -437 339 202 40 30 chr17 56947948 56948047 -32556506 + LTR30 LTR ERV1 544 643 -79 540 107 0 0 chr17 56948049 56948124 -32556429 + LTR12 LTR ERV1 615 689 -25 1388 126 36 0 chr17 56948124 56948346 -32556207 - MLT2A2 LTR ERVL -223 230 1 2121 117 13 3 chr17 56949986 56950294 -32554259 + AluY SINE Alu 1 311 0 185 65 32 0 chr17 56950377 56950408 -32554145 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 208 400 41 7 chr17 56951962 56952107 -32552446 - L2 LINE L2 -199 3073 2924 541 320 132 55 chr17 56952146 56952724 -32551829 - L2 LINE L2 -447 2867 2246 276 277 59 20 chr17 56952730 56952831 -32551722 - MIR SINE MIR -2 260 156 342 299 0 0 chr17 56952999 56953086 -32551467 + MIR SINE MIR 70 156 -106 221 329 0 0 chr17 56953457 56953530 -32551023 - L2 LINE L2 -1228 2086 2014 2259 112 3 0 chr17 56954123 56954428 -32550125 - AluSx SINE Alu -6 306 1 321 311 53 0 chr17 56954911 56955062 -32549491 - MER103 DNA DNA -7 159 1 292 288 61 102 chr17 56955091 56955355 -32549198 - MIR SINE MIR -8 254 2 205 266 0 0 chr17 56956614 56956678 -32547875 + T-rich Low_complexity Low_complexity 1 64 0 2575 225 87 20 chr17 56956711 56957673 -32546880 - L1MD2 LINE L1 -217 6142 5055 318 253 61 30 chr17 56957955 56958054 -32546499 - L2 LINE L2 -3 3310 3209 1473 197 75 6 chr17 56958086 56958421 -32546132 + MER46B DNA MER2_type 1 233 -3 378 0 0 0 chr17 56958421 56958463 -32546090 + (TG)n Simple_repeat Simple_repeat 2 43 0 28 29 0 0 chr17 56958789 56958824 -32545729 + AT_rich Low_complexity Low_complexity 1 35 0 1308 324 24 29 chr17 56959001 56959591 -32544962 + L1PA13 LINE L1 788 1374 -6200 328 356 3 9 chr17 56959643 56959832 -32544721 + L1PA13 LINE L1 2084 2303 -5271 2983 207 36 6 chr17 56960063 56961556 -32542997 + L1PA15 LINE L1 2182 3897 -3687 1916 155 53 14 chr17 56961556 56961917 -32542636 + THE1C LTR MaLR 1 375 0 7496 155 49 36 chr17 56961917 56963476 -32541077 + MSTA-int LTR MaLR 1 1580 0 2049 131 133 21 chr17 56963476 56963859 -32540694 + MSTA LTR MaLR 1 426 -2 387 49 246 0 chr17 56963859 56963920 -32540633 - MADE1 DNA Mariner 0 80 5 3381 227 19 11 chr17 56963939 56964797 -32539756 + L1PA15 LINE L1 5795 6659 -925 231 163 0 0 chr17 56964898 56964941 -32539612 + L1PA14 LINE L1 6114 6156 -5 1061 203 30 135 chr17 56965879 56966083 -32538470 - MER82 DNA MER2_type -1 652 428 2850 139 14 62 chr17 56966083 56966667 -32537886 + L1PA15 LINE L1 7040 7595 -8 1148 138 78 0 chr17 56966674 56966906 -32537647 + L1MA3 LINE L1 6056 6305 0 1061 203 30 135 chr17 56966906 56966917 -32537636 - MER82 DNA MER2_type -231 422 411 2291 123 0 0 chr17 56966917 56967227 -32537326 + AluSg SINE Alu 1 310 0 1061 203 30 135 chr17 56967227 56967372 -32537181 - MER82 DNA MER2_type -242 411 322 26 0 0 0 chr17 56967424 56967450 -32537103 + AT_rich Low_complexity Low_complexity 1 26 0 239 322 138 16 chr17 56967705 56967897 -32536656 - MIR SINE MIR -17 245 32 268 303 68 15 chr17 56968307 56968439 -32536114 + HAL1 LINE L1 2 140 -2367 184 77 51 0 chr17 56969334 56969373 -32535180 + (TA)n Simple_repeat Simple_repeat 2 42 0 470 300 140 0 chr17 56969454 56969697 -32534856 + HAL1 LINE L1 1483 1759 -748 2095 166 28 30 chr17 56970098 56970495 -32534058 - MSTD LTR MaLR 0 396 1 700 319 92 15 chr17 56973204 56973542 -32531011 + LTR16A LTR ERVL 8 371 -79 369 0 0 0 chr17 56973607 56973648 -32530905 + (TG)n Simple_repeat Simple_repeat 2 42 0 269 287 172 8 chr17 56973708 56973830 -32530723 + MIR SINE MIR 119 260 -2 298 335 137 18 chr17 56976338 56976565 -32527988 - MIR SINE MIR -7 255 2 410 292 9 0 chr17 56978103 56978216 -32526337 - MIR SINE MIR -1 261 148 232 382 37 16 chr17 56978211 56978402 -32526151 + MIR SINE MIR 49 243 -19 * 21 36 0 0 chr17 56980161 56980189 -32524364 + AT_rich Low_complexity Low_complexity 1 28 0 4085 131 17 2 chr17 56980290 56980892 -32523661 - LTR9 LTR ERV1 0 612 2 287 346 90 28 chr17 56981330 56981651 -32522902 - L2 LINE L2 -880 2434 2094 359 157 14 0 chr17 56982523 56982593 -32521960 + GA-rich Low_complexity Low_complexity 2 72 0 346 267 28 108 chr17 56982895 56983071 -32521482 - MLT1H LTR MaLR -15 534 373 586 317 6 16 chr17 56983148 56983331 -32521222 - MLT1H LTR MaLR -298 251 71 304 241 28 19 chr17 56983509 56983617 -32520936 + MLT1L LTR MaLR 507 615 0 7649 27 0 0 chr17 56984621 56985681 -32518872 - L1PA3 LINE L1 -5 6150 5092 19327 26 2 0 chr17 56985675 56988001 -32516552 + L1PA3 LINE L1 2769 5099 -1047 31 26 0 0 chr17 56988191 56988229 -32516324 + AT_rich Low_complexity Low_complexity 1 38 0 298 0 48 0 chr17 56988618 56988660 -32515893 + (TA)n Simple_repeat Simple_repeat 1 44 0 2268 170 101 13 chr17 56988812 56989289 -32515264 + LTR44 LTR ERV1 1 519 0 224 308 0 0 chr17 56989984 56990049 -32514504 + GA-rich Low_complexity Low_complexity 2 66 0 201 250 0 18 chr17 56990296 56990352 -32514201 + L2 LINE L2 3217 3271 -1 204 302 54 94 chr17 56991053 56991180 -32513373 + MIR3 SINE MIR 48 168 -40 545 272 146 0 chr17 56991180 56991338 -32513215 - MER5A DNA MER1_type 0 189 9 2159 282 39 38 chr17 56994293 56995081 -32509472 + L1M3b LINE L1 5 793 -5488 1106 279 16 103 chr17 56995317 56995576 -32508977 + L1M3b LINE L1 837 1014 -5267 1476 234 111 27 chr17 56995576 56996170 -32508383 - LTR48B LTR ERV1 0 644 1 1106 279 16 103 chr17 56996170 56996520 -32508033 + L1M3b LINE L1 1014 1393 -4888 1071 204 0 24 chr17 56996520 56996731 -32507822 - AluJo SINE Alu -13 299 94 1906 158 49 30 chr17 56996731 56997097 -32507456 - THE1C LTR MaLR 0 375 3 6285 152 12 41 chr17 56997099 56998217 -32506336 - THE1C-int LTR MaLR 0 1580 495 1542 256 56 40 chr17 56998224 56998923 -32505630 + L1M3b LINE L1 1461 2170 -4181 235 339 8 8 chr17 56998910 56999031 -32505522 + L1ME LINE L1 1441 1561 -4835 * 24 53 0 0 chr17 56999279 56999317 -32505236 + AT_rich Low_complexity Low_complexity 1 38 0 381 267 128 30 chr17 57000084 57000350 -32504203 + L1ME LINE L1 2958 3249 -2966 26 50 0 0 chr17 57000354 57000394 -32504159 + AT_rich Low_complexity Low_complexity 1 40 0 265 302 107 16 chr17 57000590 57000842 -32503711 + L1ME LINE L1 3788 4062 -2153 729 287 138 12 chr17 57000860 57001114 -32503439 + MLT1J1 LTR MaLR 21 306 -140 233 274 139 50 chr17 57001422 57002028 -32502525 + L1ME LINE L1 4813 5472 -743 319 283 189 6 chr17 57002142 57002301 -32502252 + L1ME LINE L1 5636 5823 -416 377 318 194 9 chr17 57002419 57002636 -32501917 + MIR SINE MIR 6 262 0 23 78 0 0 chr17 57002710 57002761 -32501792 + AT_rich Low_complexity Low_complexity 1 51 0 275 262 146 0 chr17 57054488 57054591 -32449962 - MIR SINE MIR -3 259 142 15795 134 21 60 chr17 57054693 57057669 -32446884 - L1P LINE L1 -3273 2873 14 37 0 0 0 chr17 57058060 57058097 -32446456 + AT_rich Low_complexity Low_complexity 1 37 0 5555 232 63 30 chr17 57058103 57058421 -32446132 + L1PBa LINE L1 32 338 -6525 2231 95 20 0 chr17 57058421 57058716 -32445837 + AluSg SINE Alu 1 301 -9 5555 232 63 30 chr17 57058716 57061311 -32443242 + L1PBa LINE L1 338 2102 -4761 691 126 0 0 chr17 57061312 57061415 -32443138 + AluSg SINE Alu 1 103 -207 1403 194 0 23 chr17 57061699 57061962 -32442591 + MLT1A1 LTR MaLR 109 365 0 595 385 26 16 chr17 57063943 57064325 -32440228 + L2 LINE L2 2568 2953 -361 447 194 0 0 chr17 57065057 57065155 -32439398 + (TA)n Simple_repeat Simple_repeat 1 98 0 4193 206 87 24 chr17 57065268 57065523 -32439030 + L1PB3 LINE L1 1830 2067 -4795 1998 141 0 10 chr17 57065523 57065835 -32438718 + AluSg SINE Alu 1 309 -1 4193 206 87 24 chr17 57065835 57067013 -32437540 + L1PB3 LINE L1 2067 3357 -3505 * 9161 192 23 17 chr17 57066995 57069851 -32434702 + L1PB3 LINE L1 3806 6686 -184 2273 98 0 3 chr17 57069851 57070146 -32434407 + AluSq SINE Alu 1 294 -19 9161 192 23 17 chr17 57070146 57070333 -32434220 + L1PB3 LINE L1 6686 6870 0 4353 132 12 1 chr17 57071233 57072116 -32432437 + L1PA15 LINE L1 4996 5889 -276 2149 149 8 31 chr17 57072116 57072364 -32432189 + L1PA15 LINE L1 5788 6026 -139 1977 145 11 0 chr17 57072364 57072674 -32431879 + AluSx SINE Alu 1 313 0 2149 149 8 31 chr17 57072674 57072806 -32431747 + L1PA15 LINE L1 6026 6160 -5 2316 228 60 8 chr17 57075187 57075774 -32428779 + L1MD3 LINE L1 7359 7975 -20 1500 161 73 11 chr17 57076106 57076379 -32428174 + AluSx SINE Alu 1 290 -22 296 250 61 53 chr17 57077198 57077330 -32427223 + MER94 DNA DNA 1 133 -1 22 56 0 0 chr17 57077392 57077428 -32427125 + AT_rich Low_complexity Low_complexity 1 36 0 198 255 0 0 chr17 57078556 57078603 -32425950 + MER5B DNA MER1_type 132 178 0 22 0 0 0 chr17 57081477 57081499 -32423054 + AT_rich Low_complexity Low_complexity 1 22 0 261 219 10 42 chr17 57082300 57082396 -32422157 - Charlie7 DNA MER1_type -47 2565 2473 301 175 48 0 chr17 57082419 57082522 -32422031 + (TA)n Simple_repeat Simple_repeat 2 109 0 724 175 0 35 chr17 57082579 57082802 -32421751 + MER6 DNA MER2_type 268 832 -33 513 0 0 0 chr17 57084452 57084509 -32420044 + (TTTTC)n Simple_repeat Simple_repeat 2 58 0 1645 170 0 18 chr17 57084518 57084801 -32419752 - AluJb SINE Alu -33 279 2 2023 127 0 48 chr17 57084809 57085125 -32419428 - AluSx SINE Alu -11 301 1 925 238 47 0 chr17 57085262 57085476 -32419077 + MER58A DNA MER1_type 1 224 0 401 346 11 39 chr17 57085492 57085674 -32418879 - MIR3 SINE MIR -11 197 21 405 0 0 0 chr17 57085863 57085908 -32418645 + (CA)n Simple_repeat Simple_repeat 1 45 0 940 297 82 47 chr17 57086099 57086467 -32418086 - L1ME3A LINE L1 -222 5948 5594 2018 134 0 33 chr17 57086467 57086772 -32417781 + AluSx SINE Alu 2 296 -16 450 0 0 0 chr17 57086773 57086823 -32417730 + (TA)n Simple_repeat Simple_repeat 1 50 0 940 297 82 47 chr17 57086823 57087731 -32416822 - L1ME3A LINE L1 -575 5595 4629 3281 246 95 53 chr17 57087741 57090179 -32414374 + L1MB1 LINE L1 7 2155 -3815 569 301 19 9 chr17 57090279 57090495 -32414058 + L1MB1 LINE L1 2348 2565 -3405 6009 134 13 8 chr17 57090516 57091498 -32413055 - L1MA2 LINE L1 0 6304 5318 5313 127 11 71 chr17 57091501 57093149 -32411404 - L1PA13 LINE L1 -11 6152 4560 916 185 98 5 chr17 57093150 57093334 -32411219 - MSTB LTR MaLR -2 424 224 4791 121 23 5 chr17 57093334 57094126 -32410427 - L1M1 LINE L1 -4797 2768 1963 8298 211 74 13 chr17 57094129 57095916 -32408637 - L1M1 LINE L1 -5657 1908 12 2870 232 19 16 chr17 57095914 57096723 -32407830 + L1MB1 LINE L1 2573 3383 -2587 * 299 242 0 11 chr17 57096744 57096835 -32407718 - L1M4 LINE L1 -2171 3975 3886 3031 100 5 5 chr17 57096964 57097395 -32407158 - L1PA13 LINE L1 -20 6143 5713 2457 231 32 13 chr17 57097385 57098014 -32406539 + L1MB1 LINE L1 3416 4056 -1914 * 3445 200 49 50 chr17 57098016 57099034 -32405519 + L1MB1 LINE L1 4751 5768 -224 3054 155 0 4 chr17 57099034 57099531 -32405022 - LOR1a LTR ERV1 0 497 3 3445 200 49 50 chr17 57099531 57099752 -32404801 + L1MB1 LINE L1 5768 5988 -4 473 260 32 53 chr17 57099818 57100073 -32404480 - L1ME3 LINE L1 0 6239 5993 377 258 139 25 chr17 57100090 57100391 -32404162 - L1M4c LINE L1 -4953 1431 1100 25 0 0 0 chr17 57100395 57100420 -32404133 + AT_rich Low_complexity Low_complexity 1 25 0 393 22 0 0 chr17 57100644 57100690 -32403863 + (TC)n Simple_repeat Simple_repeat 1 46 0 270 151 38 0 chr17 57100831 57100884 -32403669 - MLT1J2 LTR MaLR -395 55 1 566 129 35 26 chr17 57101107 57101223 -32403330 - L1MA8 LINE L1 -1 6290 6174 256 256 22 33 chr17 57101798 57101888 -32402665 + L2 LINE L2 2667 2755 -559 184 271 119 93 chr17 57102226 57102344 -32402209 + L2 LINE L2 3151 3271 -1 434 299 73 42 chr17 57102851 57103139 -32401414 - MLT1I LTR MaLR 0 409 113 206 339 0 0 chr17 57103484 57103546 -32401007 + MIR SINE MIR 86 147 -61 240 320 0 0 chr17 57103944 57104019 -32400534 + MIR SINE MIR 183 257 -5 4777 65 23 14 chr17 57104033 57104701 -32399852 - L1P LINE L1 -2545 3601 2925 1692 131 0 67 chr17 57104701 57105029 -32399524 - AluY SINE Alu -1 310 5 4777 65 23 14 chr17 57105029 57105053 -32399500 - L1P LINE L1 -3221 2925 2903 230 178 0 22 chr17 57105384 57105429 -32399124 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 6679 45 5 1 chr17 57105434 57106248 -32398305 - L1PA6 LINE L1 -4 6150 5334 455 0 18 0 chr17 57106638 57106693 -32397860 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 2234 94 0 16 chr17 57106693 57107000 -32397553 + AluSg SINE Alu 1 302 -8 284 264 94 19 chr17 57108370 57108529 -32396024 - L1ME3 LINE L1 -260 5930 5760 1119 210 99 56 chr17 57108578 57108902 -32395651 + MER2 DNA MER2_type 6 343 -2 363 96 0 0 chr17 57109073 57109125 -32395428 + (TA)n Simple_repeat Simple_repeat 2 53 0 24 0 0 0 chr17 57109473 57109497 -32395056 + AT_rich Low_complexity Low_complexity 1 24 0 238 253 12 12 chr17 57109848 57109931 -32394622 - L1ME3 LINE L1 -1537 4678 4596 21 0 0 0 chr17 57110359 57110380 -32394173 + AT_rich Low_complexity Low_complexity 1 21 0 282 297 86 57 chr17 57110500 57110675 -32393878 + L2 LINE L2 3123 3302 -11 2912 95 5 0 chr17 57111109 57111520 -32393033 + L1PA14 LINE L1 5746 6158 -3 2432 244 68 17 chr17 57111746 57112766 -32391787 - L1ME1 LINE L1 -5 6161 5090 * 5257 261 42 41 chr17 57112764 57114614 -32389939 - L1ME3 LINE L1 -1590 4625 2779 734 254 91 0 chr17 57114614 57114811 -32389742 + MER58C DNA MER1_type 1 215 0 5257 261 42 41 chr17 57114811 57115223 -32389330 - L1ME3 LINE L1 -3436 2779 2357 2327 69 7 16 chr17 57115223 57115528 -32389025 - AluY SINE Alu -9 302 1 5257 261 42 41 chr17 57115528 57115689 -32388864 - L1ME3 LINE L1 -3858 2357 2198 25 0 0 0 chr17 57115780 57115805 -32388748 + AT_rich Low_complexity Low_complexity 1 25 0 240 232 21 11 chr17 57115876 57115971 -32388582 + L1MEc LINE L1 1408 1503 -4893 233 348 51 0 chr17 57116044 57116162 -32388391 + L1MEc LINE L1 1633 1756 -4640 * 1952 259 87 27 chr17 57116160 57117015 -32387538 - L1ME3 LINE L1 -5148 1248 343 2286 211 75 19 chr17 57117517 57118038 -32386515 - MER82 DNA MER2_type -6 647 98 435 19 0 0 chr17 57118055 57118107 -32386446 + (TG)n Simple_repeat Simple_repeat 2 53 0 1712 264 18 13 chr17 57119108 57119555 -32384998 + MER74B LTR ERVL 1 449 -173 277 213 238 16 chr17 57120314 57120436 -32384117 + MIR SINE MIR 113 261 -1 697 368 106 0 chr17 57120722 57121138 -32383415 - L2 LINE L2 -350 2964 2505 645 312 151 46 chr17 57121429 57121954 -32382599 + Charlie2 DNA MER1_type 53 632 -2150 273 310 0 20 chr17 57121983 57122083 -32382470 + CT-rich Low_complexity Low_complexity 1 98 0 2280 239 71 47 chr17 57122094 57123053 -32381500 + Charlie2a DNA MER1_type 1620 2607 -255 1717 147 16 58 chr17 57123053 57123246 -32381307 - AluSx SINE Alu -13 299 122 431 18 18 0 chr17 57123246 57123302 -32381251 + (TTA)n Simple_repeat Simple_repeat 1 57 0 1717 147 16 58 chr17 57123302 57123420 -32381133 - AluSx SINE Alu -190 122 1 2280 239 71 47 chr17 57123420 57123497 -32381056 + Charlie2a DNA MER1_type 2607 2681 -181 2012 187 18 10 chr17 57123498 57123894 -32380659 - L1MA7 LINE L1 -321 5970 5572 1637 171 8 34 chr17 57123894 57124273 -32380280 + L1MA7 LINE L1 5921 6290 -1 426 187 28 19 chr17 57124286 57124393 -32380160 + Charlie2a DNA MER1_type 2674 2781 -81 30 69 0 0 chr17 57124421 57124479 -32380074 + AT_rich Low_complexity Low_complexity 1 58 0 216 143 0 0 chr17 57124487 57124529 -32380024 + (TA)n Simple_repeat Simple_repeat 2 43 0 1251 342 68 34 chr17 57124550 57125511 -32379042 - ERVL LTR ERVL -2725 3039 2047 4522 91 27 0 chr17 57127287 57127949 -32376604 + L1MA1 LINE L1 5618 6297 -5 217 135 19 39 chr17 57127953 57128005 -32376548 + A-rich Low_complexity Low_complexity 2 52 0 4935 140 65 104 chr17 57129230 57130560 -32373993 + MER52C LTR ERV1 1 1278 0 235 228 51 38 chr17 57130657 57130736 -32373817 + L3 LINE CR1 1495 1574 -3 180 0 0 0 chr17 57131640 57131660 -32372893 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 234 0 0 0 chr17 57131659 57131685 -32372868 + (TG)n Simple_repeat Simple_repeat 1 26 0 248 290 80 70 chr17 57131911 57132111 -32372442 - MIR SINE MIR -33 229 28 399 245 21 0 chr17 57132465 57132559 -32371994 - MIR SINE MIR -1 261 166 520 308 104 24 chr17 57133001 57133590 -32370963 - L1ME2 LINE L1 -217 5947 5317 353 270 98 63 chr17 57133769 57134054 -32370499 - L1ME2 LINE L1 -1249 4897 4603 1124 138 5 20 chr17 57134086 57134281 -32370272 - AluJb SINE Alu -10 302 111 1729 71 53 0 chr17 57134381 57134607 -32369946 - AluY SINE Alu -73 238 1 258 369 89 11 chr17 57135061 57135240 -32369313 + L2 LINE L2 203 395 -2919 248 406 57 14 chr17 57135248 57135529 -32369024 + L2 LINE L2 865 1157 -2157 1152 260 140 6 chr17 57135551 57135886 -32368667 + MSTD LTR MaLR 17 396 0 315 332 79 5 chr17 57135891 57136081 -32368472 + L2 LINE L2 1314 1517 -1797 734 227 40 6 chr17 57136101 57136277 -32368276 - MER5A DNA MER1_type 0 189 8 238 320 88 73 chr17 57136357 57136741 -32367812 + L2 LINE L2 1631 2020 -1294 21 0 0 0 chr17 57136841 57136862 -32367691 + AT_rich Low_complexity Low_complexity 1 21 0 638 372 105 38 chr17 57137240 57138290 -32366263 - L2 LINE L2 -2126 1188 69 450 291 39 56 chr17 57139240 57139419 -32365134 + MIR SINE MIR 37 212 -50 220 299 52 41 chr17 57140073 57140170 -32364383 - MIR SINE MIR -72 136 39 521 354 62 59 chr17 57141234 57141590 -32362963 - L2 LINE L2 0 3272 2916 225 0 0 0 chr17 57142216 57142241 -32362312 + (TG)n Simple_repeat Simple_repeat 2 26 0 188 162 27 0 chr17 57142389 57142426 -32362127 - MIR SINE MIR -10 252 215 2124 195 92 35 chr17 57143057 57143560 -32360993 + MLT2B3 LTR ERVL 1 554 0 1552 177 9 54 chr17 57143605 57143922 -32360631 - AluJb SINE Alu -9 303 1 382 292 50 25 chr17 57144634 57144795 -32359758 - MER5A DNA MER1_type -21 168 4 2558 52 0 0 chr17 57145137 57145491 -32359062 - AluY SINE Alu 0 354 1 645 309 63 9 chr17 57146287 57146510 -32358043 - MIR SINE MIR -25 237 3 337 265 92 10 chr17 57146648 57146746 -32357807 + MLT1I LTR MaLR 70 175 -234 988 241 14 0 chr17 57146964 57147180 -32357373 + MER20 DNA MER1_type 1 219 0 2156 126 7 7 chr17 57147242 57147551 -32357002 + AluSx SINE Alu 1 309 -3 225 0 0 0 chr17 57147765 57147790 -32356763 + (A)n Simple_repeat Simple_repeat 1 25 0 959 251 5 0 chr17 57148247 57148466 -32356087 - MER58A DNA MER1_type -2 222 3 519 168 63 0 chr17 57148608 57148703 -32355850 + MER20 DNA MER1_type 118 218 -1 404 252 0 19 chr17 57148716 57148819 -32355734 + MER5A DNA MER1_type 11 111 -78 182 348 58 36 chr17 57150307 57150445 -32354108 - L2 LINE L2 0 3272 3132 2126 105 0 27 chr17 57150510 57150804 -32353749 + AluSx SINE Alu 3 288 -24 347 314 24 8 chr17 57152317 57152441 -32352112 + MIR SINE MIR 79 204 -58 268 158 0 60 chr17 57152441 57152574 -32351979 + (TA)n Simple_repeat Simple_repeat 1 125 0 1799 148 62 15 chr17 57153022 57153347 -32351206 - MER61A LTR ERV1 0 343 4 15580 96 29 29 chr17 57153348 57153903 -32350650 - MER61A-int LTR ERV1 -1221 4949 4395 1577 118 126 0 chr17 57153903 57154028 -32350525 - AluSc SINE Alu -12 287 179 405 0 0 0 chr17 57154028 57154073 -32350480 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1577 118 126 0 chr17 57154073 57154202 -32350351 - AluSc SINE Alu -120 179 1 15580 96 29 29 chr17 57154202 57156184 -32348369 - MER61A-int LTR ERV1 -1775 4395 1655 288 149 0 0 chr17 57156182 57156229 -32348324 - MER61A-int LTR ERV1 -3851 1366 1320 * 390 158 40 26 chr17 57156259 57156335 -32348218 - MER61A-int LTR ERV1 -4510 707 631 1593 162 52 31 chr17 57156418 57156455 -32348098 - MER61A-int LTR ERV1 -4718 499 464 2215 115 0 7 chr17 57156455 57156760 -32347793 + AluSx SINE Alu 1 303 -9 1593 162 52 31 chr17 57156760 57157138 -32347415 - MER61A-int LTR ERV1 -4753 464 1 1595 164 54 30 chr17 57157138 57157473 -32347080 - MER61A LTR ERV1 0 343 1 1330 173 53 43 chr17 57157777 57158077 -32346476 - THE1C LTR MaLR -72 303 1 204 191 0 24 chr17 57158274 57158316 -32346237 + L2 LINE L2 3257 3297 -16 2064 78 0 0 chr17 57159124 57159395 -32345158 + L1PA8 LINE L1 5901 6171 -1 786 218 62 6 chr17 57160713 57160892 -32343661 + MER5A DNA MER1_type 1 189 0 2403 147 23 2 chr17 57161163 57161692 -32342861 - L1PA16 LINE L1 -9 6157 5523 230 364 0 0 chr17 57161730 57161807 -32342746 + L2 LINE L2 3234 3310 -3 22 35 0 0 chr17 57161825 57161854 -32342699 + AT_rich Low_complexity Low_complexity 1 29 0 905 190 0 6 chr17 57164404 57164567 -32339986 + FRAM SINE Alu 1 155 -21 1631 231 39 63 chr17 57165975 57166465 -32338088 - MLT2B1 LTR ERVL -42 478 1 225 0 0 0 chr17 57167132 57167157 -32337396 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1757 60 0 0 chr17 57167157 57167374 -32337179 - L1PA8 LINE L1 -16 6156 5940 22 0 0 0 chr17 57167903 57167925 -32336628 + AT_rich Low_complexity Low_complexity 1 22 0 2195 260 57 53 chr17 57168262 57169680 -32334873 - L1ME2 LINE L1 -19 6145 4737 23 0 0 0 chr17 57170917 57170940 -32333613 + AT_rich Low_complexity Low_complexity 1 23 0 180 291 0 0 chr17 57171045 57171100 -32333453 - L3b LINE CR1 -188 1395 1341 40 37 0 0 chr17 57171359 57171413 -32333140 + AT_rich Low_complexity Low_complexity 1 54 0 537 76 13 13 chr17 57171420 57171499 -32333054 + MLT2A1 LTR ERVL 127 205 -239 890 179 0 0 chr17 57171557 57171702 -32332851 + L1PA13 LINE L1 1457 1601 -5186 1408 233 35 43 chr17 57171749 57172123 -32332430 + MLT1A2 LTR MaLR 4 374 0 3022 81 37 5 chr17 57172127 57172517 -32332036 + MLT2A1 LTR ERVL 1 408 -36 216 0 0 0 chr17 57172517 57172541 -32332012 + (TCTA)n Simple_repeat Simple_repeat 3 26 0 3022 81 37 5 chr17 57172541 57172580 -32331973 + MLT2A1 LTR ERVL 408 444 0 5861 120 186 15 chr17 57172943 57174032 -32330521 + MER52C LTR ERV1 4 1278 0 380 345 185 21 chr17 57174032 57174313 -32330240 + LTR33 LTR ERVL 28 354 -167 32 0 0 0 chr17 57174695 57174727 -32329826 + AT_rich Low_complexity Low_complexity 1 32 0 2187 124 3 0 chr17 57174757 57175063 -32329490 + AluSq SINE Alu 1 307 -6 504 254 32 0 chr17 57175076 57175202 -32329351 - MER21B LTR ERV1 -73 790 661 1125 270 87 17 chr17 57175205 57175550 -32329003 - MER21B LTR ERV1 -402 461 93 771 207 7 0 chr17 57175785 57175930 -32328623 - MLT1C LTR MaLR -321 146 1 738 110 0 0 chr17 57176084 57176184 -32328369 + AluSg/x SINE Alu 198 297 -15 858 126 0 0 chr17 57176853 57176988 -32327565 + (GAAA)n Simple_repeat Simple_repeat 4 138 0 671 336 81 17 chr17 57177089 57177574 -32326979 + HERVL LTR ERVL 4321 4823 -831 254 306 0 0 chr17 57178391 57178453 -32326100 + L2 LINE L2 3195 3256 -16 21 0 0 0 chr17 57178929 57178950 -32325603 + AT_rich Low_complexity Low_complexity 1 21 0 225 143 0 32 chr17 57179695 57179758 -32324795 - L1MC4 LINE L1 -1342 6700 6640 1287 201 83 21 chr17 57179892 57180268 -32324285 - MER67C LTR ERV1 -247 267 1 255 157 0 0 chr17 57180913 57180964 -32323589 + CT-rich Low_complexity Low_complexity 2 52 0 256 351 29 12 chr17 57181300 57181471 -32323082 - L1ME3A LINE L1 -9 6161 5988 357 308 178 0 chr17 57232089 57232235 -32272318 + MIR SINE MIR 52 223 -39 22 0 0 0 chr17 57232953 57232975 -32271578 + AT_rich Low_complexity Low_complexity 1 22 0 3229 146 25 10 chr17 57233304 57233823 -32270730 + MER1A DNA MER1_type 1 527 0 3570 175 84 27 chr17 57234101 57234882 -32269671 - LTR1B LTR ERV1 0 826 1 503 177 10 10 chr17 57235266 57235362 -32269191 + MER4A LTR ERV1 3 98 -566 1409 137 61 54 chr17 57235362 57235560 -32268993 + MER4A LTR ERV1 261 456 -208 2242 111 0 0 chr17 57235560 57235857 -32268696 + AluSx SINE Alu 4 300 -12 1409 137 61 54 chr17 57235857 57236001 -32268552 + MER4A LTR ERV1 456 664 0 216 0 0 0 chr17 57236091 57236115 -32268438 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr17 57238197 57238219 -32266334 + AT_rich Low_complexity Low_complexity 1 22 0 1271 208 107 68 chr17 57239094 57239532 -32265021 - MSTB2 LTR MaLR -2 455 1 833 290 108 79 chr17 57239586 57240131 -32264422 - MLT1G LTR MaLR -3 587 27 1217 297 40 27 chr17 57240381 57240825 -32263728 - LTR16B LTR ERVL 0 464 15 4313 248 98 75 chr17 57241007 57242391 -32262162 + L1MC/D LINE L1 539 1976 -4564 2238 108 3 0 chr17 57242391 57242696 -32261857 - AluSg SINE Alu -4 306 1 4313 248 98 75 chr17 57242696 57243109 -32261444 + L1MC/D LINE L1 1976 2378 -4162 2473 178 52 90 chr17 57243109 57243659 -32260894 + LTR8 LTR ERV1 1 522 -169 2180 102 0 10 chr17 57243659 57243962 -32260591 + AluY SINE Alu 1 300 -11 2473 178 52 90 chr17 57243962 57244090 -32260463 + LTR8 LTR ERV1 522 653 -38 1898 148 3 0 chr17 57244091 57244398 -32260155 + AluSx SINE Alu 1 308 0 411 141 31 0 chr17 57244411 57244475 -32260078 + AluS SINE Alu 220 285 -25 326 196 0 0 chr17 57244475 57244531 -32260022 + LTR8 LTR ERV1 636 691 0 958 228 55 7 chr17 57244539 57245019 -32259534 + L1MC/D LINE L1 2384 2889 -3651 1220 167 97 12 chr17 57245024 57245282 -32259271 - LTR4 LTR ERV1 0 596 317 230 246 53 0 chr17 57245357 57245414 -32259139 - LTR4 LTR ERV1 -239 357 298 444 253 154 13 chr17 57245565 57245798 -32258755 + L1MC/D LINE L1 2909 3174 -3366 2130 84 10 39 chr17 57245893 57246204 -32258349 - AluY SINE Alu -9 302 1 634 252 44 51 chr17 57246295 57246589 -32257964 + L1MC/D LINE L1 3868 4159 -2381 501 242 88 16 chr17 57246567 57246761 -32257792 + L1MC/D LINE L1 5648 5855 -781 * 1684 293 43 33 chr17 57246826 57247997 -32256556 - L1M4c LINE L1 -4539 2420 1239 2745 108 5 12 chr17 57248170 57248577 -32255976 - MER4A LTR ERV1 0 664 261 651 111 0 10 chr17 57248577 57248676 -32255877 - MER4A LTR ERV1 -566 98 1 695 300 54 22 chr17 57248984 57249323 -32255230 - L1M4c LINE L1 -5635 1224 652 1763 134 102 15 chr17 57249414 57249749 -32254804 + LTR1B LTR ERV1 1 364 -462 3725 94 9 2 chr17 57249834 57250367 -32254186 - MER41A LTR ERV1 0 554 18 1090 166 107 39 chr17 57250521 57250838 -32253715 + LTR1B LTR ERV1 439 785 0 235 265 0 0 chr17 57250840 57250889 -32253664 - L1M4c LINE L1 -6328 531 483 1056 242 21 100 chr17 57250890 57251311 -32253242 - L1M4c LINE L1 -6430 429 42 27 29 0 0 chr17 57251494 57251528 -32253025 + AT_rich Low_complexity Low_complexity 1 34 0 184 171 29 0 chr17 57253286 57253321 -32251232 + MIR SINE MIR 111 146 -62 467 279 34 39 chr17 57253424 57253603 -32250950 - MLT1F LTR MaLR -26 516 339 321 350 0 8 chr17 57254998 57255121 -32249432 - L1MEc LINE L1 -2630 4311 4190 1369 77 0 31 chr17 57255123 57255319 -32249234 + AluY SINE Alu 1 190 -121 1206 81 0 0 chr17 57255320 57255480 -32249073 + AluY SINE Alu 143 302 -9 582 117 36 18 chr17 57255541 57255652 -32248901 - L1PA11 LINE L1 -1 6173 6061 628 275 180 24 chr17 57255654 57255863 -32248690 - L1MEc LINE L1 -2811 4130 3955 1671 213 70 43 chr17 57255863 57256352 -32248201 - MLT1D LTR MaLR -2 503 2 628 275 180 24 chr17 57256352 57256975 -32247578 - L1MEc LINE L1 -2986 3955 3168 262 149 119 0 chr17 57257006 57257073 -32247480 + MLT1D LTR MaLR 150 224 -281 536 100 0 12 chr17 57257086 57257166 -32247387 - MADE1 DNA Mariner 0 80 2 314 330 80 11 chr17 57257185 57257361 -32247192 - L1MEc LINE L1 -3924 3198 3011 1224 222 113 19 chr17 57258171 57258595 -32245958 - L1MC4a LINE L1 -481 7327 6864 618 81 0 0 chr17 57258844 57258930 -32245623 + L1PB3 LINE L1 6067 6152 -2 21 36 0 0 chr17 57259301 57259329 -32245224 + AT_rich Low_complexity Low_complexity 1 28 0 2427 42 13 16 chr17 57259640 57259952 -32244601 - AluY SINE Alu 0 311 1 385 360 29 17 chr17 57260465 57260637 -32243916 + MIR3 SINE MIR 11 184 -24 24 32 0 0 chr17 57260642 57260673 -32243880 + AT_rich Low_complexity Low_complexity 1 31 0 291 175 0 0 chr17 57260714 57260771 -32243782 + CT-rich Low_complexity Low_complexity 1 57 0 1983 125 0 0 chr17 57260771 57261052 -32243501 - AluSg SINE Alu -9 301 21 32 0 0 0 chr17 57261650 57261682 -32242871 + AT_rich Low_complexity Low_complexity 1 32 0 689 109 0 0 chr17 57261683 57261784 -32242769 - L1PB1 LINE L1 -4 6147 6047 604 88 20 10 chr17 57261789 57261891 -32242662 + L1PB1 LINE L1 5944 6046 -105 190 331 102 32 chr17 57262012 57262169 -32242384 - MIR SINE MIR -19 243 76 776 196 141 16 chr17 57262736 57262920 -32241633 - MER20 DNA MER1_type -12 207 1 201 94 0 0 chr17 57263050 57263082 -32241471 + (TAAAAA)n Simple_repeat Simple_repeat 1 32 0 26 0 0 0 chr17 57263236 57263262 -32241291 + AT_rich Low_complexity Low_complexity 1 26 0 205 345 59 8 chr17 57263272 57263391 -32241162 + MIR SINE MIR 82 206 -56 244 255 69 36 chr17 57263651 57263867 -32240686 - L1M4b LINE L1 -4938 1519 1263 22 0 0 0 chr17 57264511 57264533 -32240020 + AT_rich Low_complexity Low_complexity 1 22 0 258 56 0 0 chr17 57264595 57264631 -32239922 + (TTTTA)n Simple_repeat Simple_repeat 4 39 0 339 45 0 0 chr17 57264631 57264675 -32239878 - L1PA3 LINE L1 -13 6142 6099 6750 120 41 4 chr17 57265273 57266246 -32238307 - L1P LINE L1 -2765 3381 2373 2099 110 17 3 chr17 57266271 57266562 -32237991 + AluSx SINE Alu 1 295 -17 2127 183 37 4 chr17 57267024 57267478 -32237075 - L1MD1 LINE L1 0 6636 6168 1926 213 56 51 chr17 57267504 57267932 -32236621 + MLT2B2 LTR ERVL 30 459 -56 3241 68 2 0 chr17 57267969 57268383 -32236170 + LTR14C LTR ERVK 171 585 -2 237 159 0 0 chr17 57268398 57268442 -32236111 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 418 141 14 0 chr17 57268455 57268526 -32236027 + MLT1A1 LTR MaLR 294 365 0 616 225 40 32 chr17 57268526 57268785 -32235768 - L1MD1 LINE L1 -475 6161 5711 1756 59 0 0 chr17 57268791 57269013 -32235540 - L1PA7 LINE L1 -1 6153 5932 3491 80 14 2 chr17 57269013 57269823 -32234730 + L1P3 LINE L1 4906 5722 -432 752 262 63 40 chr17 57269810 57270541 -32234012 - L1MD1 LINE L1 -804 5736 5023 * 2515 183 99 14 chr17 57270541 57270731 -32233822 + MER6A DNA MER2_type 1 174 -691 279 0 0 0 chr17 57270731 57270762 -32233791 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 315 0 0 0 chr17 57270761 57270796 -32233757 + (TG)n Simple_repeat Simple_repeat 1 35 0 2515 183 99 14 chr17 57270762 57271163 -32233390 + MER6A DNA MER2_type 174 605 0 752 262 63 40 chr17 57271163 57272003 -32232550 - L1MD1 LINE L1 -1517 5023 4085 5723 103 68 2 chr17 57272003 57273208 -32231345 - L1PA13 LINE L1 0 6163 4901 1056 99 0 7 chr17 57273402 57273553 -32231000 - L1PB1 LINE L1 -175 5976 5827 685 212 108 0 chr17 57273559 57273762 -32230791 - L1MD1 LINE L1 -4266 2274 2050 2830 254 97 17 chr17 57274675 57275688 -32228865 - L1MC4 LINE L1 -16 8026 6933 4280 169 31 44 chr17 57275785 57276717 -32227836 - L1MA4 LINE L1 -16 6284 5365 * 5819 198 19 33 chr17 57276697 57278076 -32226477 + L1MA4 LINE L1 3982 5341 -805 626 219 0 0 chr17 57278192 57278311 -32226242 - L1MD3 LINE L1 -1207 6788 6670 241 165 68 117 chr17 57278404 57278507 -32226046 - L1MC4a LINE L1 -1326 6482 6385 4274 72 0 4 chr17 57278684 57279240 -32225313 - MER41A LTR ERV1 0 554 1 1599 93 9 0 chr17 57279240 57279454 -32225099 - MER41A-int LTR ERV1 -2 5944 5729 * 6673 87 32 1 chr17 57279451 57280391 -32224162 - MER41A-int LTR ERV1 -465 5481 4513 1868 179 31 13 chr17 57280391 57280776 -32223777 - L1MA8 LINE L1 -75 6216 5825 1575 139 12 79 chr17 57280783 57281113 -32223440 - MLT2A2 LTR ERVL -145 308 1 1824 297 31 54 chr17 57281114 57282037 -32222516 - L1M3de LINE L1 -5388 1265 4 5329 241 30 8 chr17 57282047 57284151 -32220402 - L1MC1 LINE L1 -506 5896 3742 349 345 18 12 chr17 57284884 57285049 -32219504 - L1MC1 LINE L1 -6195 201 36 464 208 15 69 chr17 57288078 57288208 -32216345 - L2 LINE L2 0 3313 3191 187 339 31 0 chr17 57288682 57288747 -32215806 - L2 LINE L2 -1002 2312 2246 862 175 11 0 chr17 57288860 57289037 -32215516 + CT-rich Low_complexity Low_complexity 2 180 0 221 147 0 0 chr17 57289037 57289071 -32215482 + (TTC)n Simple_repeat Simple_repeat 3 36 0 850 204 0 6 chr17 57290914 57291076 -32213477 - FRAM SINE Alu -11 165 5 198 333 12 24 chr17 57291352 57291436 -32213117 + L2 LINE L2 3180 3262 -10 21 36 0 0 chr17 57291714 57291742 -32212811 + AT_rich Low_complexity Low_complexity 1 28 0 255 323 30 0 chr17 57293150 57293249 -32211304 + L2 LINE L2 3212 3313 0 272 293 60 53 chr17 57294158 57294217 -32210336 - L2 LINE L2 -5 3308 3251 1933 179 15 9 chr17 57294217 57294558 -32209995 + MER61A LTR ERV1 1 343 0 272 293 60 53 chr17 57294558 57294631 -32209922 - L2 LINE L2 -62 3251 3175 267 222 0 14 chr17 57295024 57295096 -32209457 + A-rich Low_complexity Low_complexity 3 73 0 34 42 0 0 chr17 57295979 57296027 -32208526 + AT_rich Low_complexity Low_complexity 1 48 0 2080 135 0 0 chr17 57296397 57296694 -32207859 + AluSx SINE Alu 1 297 -15 1267 76 0 0 chr17 57297629 57297786 -32206767 + AluY SINE Alu 139 295 -16 261 338 76 28 chr17 57298075 57298220 -32206333 - MIR SINE MIR -64 198 47 2323 118 14 0 chr17 57299210 57299567 -32204986 - L1PB1 LINE L1 -4 6147 5786 353 284 0 0 chr17 57299572 57299660 -32204893 - L1MC4 LINE L1 -1341 6701 6614 303 214 0 14 chr17 57299631 57299701 -32204852 - L1MCa LINE L1 -4362 2064 1996 * 3290 157 53 4 chr17 57299705 57300663 -32203890 - L1P5 LINE L1 -360 5791 4789 232 300 0 22 chr17 57300787 57300802 -32203751 + GA-rich Low_complexity Low_complexity 3 17 -73 2206 196 19 14 chr17 57300802 57301226 -32203327 - MSTB LTR MaLR 0 426 1 232 300 0 22 chr17 57301226 57301300 -32203253 + GA-rich Low_complexity Low_complexity 17 90 0 18863 172 65 16 chr17 57303011 57306017 -32198536 + L1MA1 LINE L1 12 2869 -4852 2233 148 13 5 chr17 57306017 57306389 -32198164 - THE1C LTR MaLR 0 375 1 18863 172 65 16 chr17 57306389 57310609 -32193944 + L1MA1 LINE L1 2869 7611 -110 814 281 23 5 chr17 57310910 57311127 -32193426 + MER58A DNA MER1_type 4 224 0 591 253 95 37 chr17 57311145 57311335 -32193218 + MIR SINE MIR 37 237 -25 242 284 101 37 chr17 57311765 57311874 -32192679 - LTR50 LTR ERVL -322 473 358 228 323 100 15 chr17 57312818 57312948 -32191605 + L2 LINE L2 3148 3288 -25 240 35 0 0 chr17 57313055 57313084 -32191469 + (CAA)n Simple_repeat Simple_repeat 2 30 0 235 315 92 15 chr17 57313632 57313762 -32190791 - MIR SINE MIR -26 236 97 233 216 87 0 chr17 57313772 57313851 -32190702 - MLT1G1 LTR MaLR -3 590 460 238 308 31 15 chr17 57314174 57314239 -32190314 - MIR SINE MIR -176 86 21 405 58 0 0 chr17 57314595 57314647 -32189906 + (CA)n Simple_repeat Simple_repeat 2 53 0 2609 108 3 13 chr17 57314647 57315026 -32189527 - THE1C LTR MaLR 0 375 1 235 327 19 10 chr17 57315166 57315270 -32189283 - MLT1J2 LTR MaLR -246 204 100 293 243 184 0 chr17 57316595 57316698 -32187855 - L1MA10 LINE L1 -9 6325 6204 1556 119 0 0 chr17 57316702 57316912 -32187641 + AluSc SINE Alu 1 210 -99 1983 254 84 7 chr17 57316926 57317581 -32186972 - L1ME1 LINE L1 -108 6058 5354 1455 58 0 16 chr17 57319659 57319869 -32184684 - AluY SINE Alu 0 311 111 28 48 0 0 chr17 57319956 57319998 -32184555 + AT_rich Low_complexity Low_complexity 1 42 0 405 329 74 4 chr17 57320395 57320609 -32183944 + MIR SINE MIR 5 227 -35 267 312 11 11 chr17 57320686 57320779 -32183774 - MIR3 SINE MIR -15 193 101 733 315 36 0 chr17 57320934 57321156 -32183397 + MIR SINE MIR 33 262 0 1656 95 4 4 chr17 57321828 57322071 -32182482 + L1PA10 LINE L1 5926 6168 0 193 54 0 54 chr17 57322160 57322197 -32182356 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 282 288 0 0 chr17 57322281 57322354 -32182199 + (TATATG)n Simple_repeat Simple_repeat 4 76 0 26 0 0 0 chr17 57323530 57323556 -32180997 + AT_rich Low_complexity Low_complexity 1 26 0 188 364 0 0 chr17 57323921 57323976 -32180577 - MER5A DNA MER1_type -1 188 134 2531 104 6 3 chr17 57324645 57324999 -32179554 - THE1A LTR MaLR 0 355 1 5495 121 10 4 chr17 57324999 57325806 -32178747 - THE1A-int LTR MaLR 0 1580 769 2531 104 6 3 chr17 57326698 57327052 -32177501 - THE1A LTR MaLR 0 355 1 10831 121 5 2 chr17 57327052 57328627 -32175926 - THE1A-int LTR MaLR 0 1580 1 2628 86 14 3 chr17 57328627 57328978 -32175575 - THE1A LTR MaLR 0 355 1 1687 265 86 25 chr17 57329855 57330588 -32173965 - L1ME2 LINE L1 -1 6163 5386 466 241 82 50 chr17 57330574 57330794 -32173759 - L1ME2 LINE L1 -329 5835 5609 * 700 316 25 6 chr17 57330789 57331112 -32173441 - L1MCc LINE L1 -4951 1472 1144 320 279 180 22 chr17 57331519 57331741 -32172812 + L1ME4a LINE L1 5708 5964 -157 1195 47 26 21 chr17 57333448 57333680 -32170873 + (TTTC)n Simple_repeat Simple_repeat 1 233 0 343 203 14 14 chr17 57333853 57333922 -32170631 + MLT1E LTR MaLR 1 69 -473 1445 222 110 36 chr17 57333926 57334345 -32170208 - LTR40a LTR ERVL 0 519 70 768 256 140 30 chr17 57334371 57334808 -32169745 + MLT1E LTR MaLR 67 593 0 2279 87 0 10 chr17 57335359 57335658 -32168895 + AluSc SINE Alu 1 296 -13 7837 164 38 29 chr17 57336043 57338894 -32165659 - L1MA3 LINE L1 0 7724 4846 * 12939 157 26 33 chr17 57338891 57339451 -32165102 - L1MA3 LINE L1 -3559 4006 3443 207 0 0 0 chr17 57339451 57339474 -32165079 + (TG)n Simple_repeat Simple_repeat 2 24 0 12939 157 26 33 chr17 57339474 57339555 -32164998 - L1MA3 LINE L1 -4122 3443 3363 1975 101 4 11 chr17 57339555 57339847 -32164706 + AluSp SINE Alu 27 313 0 12939 157 26 33 chr17 57339847 57342125 -32162428 - L1MA3 LINE L1 -4202 3363 1099 523 200 24 16 chr17 57342111 57342236 -32162317 - L1MA3 LINE L1 -7421 144 19 * 291 293 52 19 chr17 57342282 57342494 -32162059 - L1ME LINE L1 -301 5820 5602 255 167 37 0 chr17 57342620 57342674 -32161879 - L1ME LINE L1 -687 5434 5379 26 30 0 0 chr17 57342823 57342856 -32161697 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr17 57343005 57343035 -32161518 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 57343312 57343333 -32161220 + AT_rich Low_complexity Low_complexity 1 21 0 772 304 116 42 chr17 57343643 57344093 -32160460 + L2 LINE L2 2494 2976 -338 784 206 21 44 chr17 57344235 57344564 -32159989 + MLT1D LTR MaLR 141 505 0 326 287 117 42 chr17 57344567 57344832 -32159721 + L2 LINE L2 3021 3305 -8 363 183 54 32 chr17 57346235 57346328 -32158225 + MLT1B LTR MaLR 245 339 -51 949 129 0 7 chr17 57346389 57346536 -32158017 - AluSg/x SINE Alu -3 309 164 226 294 98 0 chr17 57346735 57346827 -32157726 - L1M4 LINE L1 -1308 4838 4738 332 325 154 5 chr17 57347259 57347447 -32157106 + L1 LINE L1 3671 3886 -2260 184 346 90 52 chr17 57347969 57348180 -32156373 - MIR SINE MIR -30 232 14 750 176 33 13 chr17 57349011 57349164 -32155389 - L1MA3 LINE L1 -10 6295 6140 1330 175 17 44 chr17 57349178 57349475 -32155078 - L1PB4 LINE L1 -12 6144 5856 410 143 98 62 chr17 57349482 57349594 -32154959 - L1PB4 LINE L1 -264 5892 5777 314 195 0 9 chr17 57349717 57349830 -32154723 + (TA)n Simple_repeat Simple_repeat 2 113 0 3179 163 35 1 chr17 57349836 57350906 -32153647 - L1PB4 LINE L1 -368 5788 4682 428 254 67 0 chr17 57350905 57351039 -32153514 - L1MA4A LINE L1 -155 6148 6006 * 346 307 101 41 chr17 57351042 57351324 -32153229 - L1M4 LINE L1 -814 5332 5024 198 0 0 0 chr17 57351324 57351346 -32153207 + (TG)n Simple_repeat Simple_repeat 1 22 0 346 307 101 41 chr17 57351346 57351408 -32153145 - L1M4 LINE L1 -1122 5024 4967 23 33 0 0 chr17 57351595 57351625 -32152928 + AT_rich Low_complexity Low_complexity 1 30 0 29 94 0 0 chr17 57352094 57352179 -32152374 + AT_rich Low_complexity Low_complexity 1 85 0 28 61 0 0 chr17 57352210 57352259 -32152294 + AT_rich Low_complexity Low_complexity 1 49 0 1121 267 66 59 chr17 57352482 57353176 -32151377 + L1ME3A LINE L1 5463 6161 -9 594 118 0 0 chr17 57353420 57353532 -32151021 + AluSg/x SINE Alu 198 309 0 9179 196 80 10 chr17 57353958 57355766 -32148787 + L1PA15-16 LINE L1 1 1934 -4915 866 135 0 0 chr17 57355768 57355894 -32148659 - AluSg/x SINE Alu -6 306 181 1192 90 0 26 chr17 57355895 57356084 -32148469 + L1PA15-16 LINE L1 2737 2920 -3929 824 233 49 38 chr17 57356082 57356370 -32148183 + L1 LINE L1 3229 3519 -3330 * 437 97 0 0 chr17 57356370 57356432 -32148121 - THE1C LTR MaLR -313 62 1 9329 146 44 5 chr17 57356438 57357953 -32146600 - THE1C-int LTR MaLR -6 1574 1 2454 138 3 5 chr17 57357953 57358329 -32146224 - THE1C LTR MaLR 0 375 1 1511 211 0 44 chr17 57358332 57358721 -32145832 + L1 LINE L1 4046 4417 -1729 533 220 10 0 chr17 57358721 57358821 -32145732 + LTR46 LTR ERV1 1 101 -359 344 245 108 0 chr17 57358912 57359051 -32145502 + LTR46 LTR ERV1 276 429 -31 5005 195 28 11 chr17 57359065 57360796 -32143757 + L1PA16 LINE L1 4409 6161 -5 305 287 90 75 chr17 57360861 57361419 -32143134 + HAL1 LINE L1 1138 1703 -804 411 375 52 9 chr17 57361699 57362118 -32142435 + L1MC/D LINE L1 5383 5819 -1989 194 79 0 53 chr17 57362467 57362505 -32142048 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 2251 82 4 0 chr17 57362682 57362962 -32141591 - AluSc SINE Alu -28 281 1 480 256 60 75 chr17 57363009 57363208 -32141345 + L2 LINE L2 3118 3313 0 22 56 0 0 chr17 57363989 57364025 -32140528 + AT_rich Low_complexity Low_complexity 1 36 0 2302 139 8 14 chr17 57364210 57364576 -32139977 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr17 57364838 57364867 -32139686 + AT_rich Low_complexity Low_complexity 1 29 0 580 280 6 34 chr17 57364870 57365045 -32139508 + L1MA4 LINE L1 1357 1526 -5970 2181 246 56 68 chr17 57365050 57366496 -32138057 + L1MA4 LINE L1 2209 3402 -4229 1363 174 82 4 chr17 57366496 57366766 -32137787 + AluSx SINE Alu 1 291 -21 2181 246 56 68 chr17 57366766 57367101 -32137452 + L1MA4 LINE L1 3402 3740 -3891 * 7810 194 78 25 chr17 57367099 57369529 -32135024 + L1MA4 LINE L1 4659 7208 -511 2571 105 0 36 chr17 57369619 57369784 -32134769 + THE1C LTR MaLR 1 170 -205 2171 189 51 16 chr17 57369784 57370272 -32134281 + LTR22 LTR ERVK 1 505 -4 2571 105 0 36 chr17 57370272 57370495 -32134058 + THE1C LTR MaLR 170 375 0 9273 118 38 51 chr17 57370495 57370867 -32133686 + THE1C-int LTR MaLR 1 376 -1204 1828 163 3 3 chr17 57370867 57371174 -32133379 - AluSx SINE Alu -5 307 1 9273 118 38 51 chr17 57371174 57372396 -32132157 + THE1C-int LTR MaLR 376 1574 -6 2231 121 16 29 chr17 57372401 57372780 -32131773 + THE1C LTR MaLR 1 374 -1 527 130 10 0 chr17 57372784 57372884 -32131669 + (CA)n Simple_repeat Simple_repeat 2 102 0 1266 147 55 0 chr17 57372898 57373116 -32131437 + MER30 DNA MER1_type 1 230 0 279 0 0 0 chr17 57373120 57373151 -32131402 + (CA)n Simple_repeat Simple_repeat 2 32 0 1688 226 42 9 chr17 57373174 57373635 -32130918 + L1MA4 LINE L1 7242 7707 -12 520 287 73 45 chr17 57373653 57374291 -32130262 + L1MEd LINE L1 663 1272 -4857 348 318 92 26 chr17 57374414 57374609 -32129944 - L2 LINE L2 -337 2977 2770 475 343 66 12 chr17 57374788 57375030 -32129523 - MLT1J1 LTR MaLR -149 297 43 471 241 226 7 chr17 57375451 57375588 -32128965 + MER5A DNA MER1_type 16 182 -7 23 54 0 0 chr17 57375978 57376015 -32128538 + AT_rich Low_complexity Low_complexity 1 37 0 1272 160 42 8 chr17 57376579 57376816 -32127737 + L1PB4 LINE L1 5909 6153 -3 223 289 144 0 chr17 57376850 57376947 -32127606 - MIR SINE MIR -64 198 88 402 278 51 40 chr17 57377853 57378029 -32126524 + MER5B DNA MER1_type 1 178 0 1494 123 0 0 chr17 57378193 57378396 -32126157 - AluSg SINE Alu -107 203 1 346 274 19 28 chr17 57378557 57378663 -32125890 + MER5A DNA MER1_type 77 181 -8 474 65 0 0 chr17 57378753 57378815 -32125738 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 21 0 0 0 chr17 57379607 57379628 -32124925 + AT_rich Low_complexity Low_complexity 1 21 0 338 225 16 23 chr17 57380084 57380213 -32124340 + GA-rich Low_complexity Low_complexity 3 130 0 373 286 27 43 chr17 57380927 57381112 -32123441 + MER104 DNA Tc2 1 177 -3 1581 209 7 0 chr17 57381860 57382166 -32122387 - AluJb SINE Alu -2 310 3 8923 184 36 15 chr17 57382187 57384928 -32119625 - L1PA13 LINE L1 -6 6157 3373 25 31 0 0 chr17 57385114 57385146 -32119407 + AT_rich Low_complexity Low_complexity 1 32 0 565 220 122 9 chr17 57385481 57385695 -32118858 - Charlie1 DNA MER1_type -2 2759 2522 197 314 108 20 chr17 57386827 57386929 -32117624 + L2 LINE L2 3140 3250 -22 453 293 128 35 chr17 57388912 57389202 -32115351 + MER20B DNA MER1_type 31 347 -436 47 67 0 0 chr17 57389310 57389399 -32115154 + AT_rich Low_complexity Low_complexity 1 89 0 987 153 6 17 chr17 57389983 57390160 -32114393 + Tigger7 DNA MER2_type 2413 2587 0 239 317 81 32 chr17 57390382 57390505 -32114048 + MER5B DNA MER1_type 50 178 0 255 362 39 68 chr17 57390779 57391364 -32113189 - L2 LINE L2 -1020 2294 1727 340 315 148 12 chr17 57391759 57391921 -32112632 + MER5A DNA MER1_type 4 187 -2 219 325 26 13 chr17 57391979 57392056 -32112497 - MER5A DNA MER1_type -48 141 64 28 48 0 0 chr17 57393127 57393169 -32111384 + AT_rich Low_complexity Low_complexity 1 42 0 532 335 194 29 chr17 57393307 57393841 -32110712 - L2 LINE L2 -2159 1155 466 2219 178 68 5 chr17 57393841 57394280 -32110273 + LTR24 LTR ERV1 1 467 0 532 335 194 29 chr17 57394280 57394477 -32110076 - L2 LINE L2 -2848 466 303 1738 195 40 34 chr17 57394496 57394876 -32109677 + MLT1B LTR MaLR 1 382 -8 1690 211 72 10 chr17 57395070 57395530 -32109023 + MER110A LTR ERV1 21 491 0 216 0 0 0 chr17 57396507 57396531 -32108022 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 225 282 88 46 chr17 57396993 57397255 -32107298 + L1ME2 LINE L1 1155 1427 -5520 238 232 73 0 chr17 57397267 57397349 -32107204 + L1ME2 LINE L1 1322 1409 -5450 615 233 114 5 chr17 57397417 57397619 -32106934 + L1ME2 LINE L1 5683 5906 -1051 293 248 50 0 chr17 57397629 57397730 -32106823 + L1ME2 LINE L1 5954 6059 -898 399 183 65 12 chr17 57397743 57397912 -32106641 + (TA)n Simple_repeat Simple_repeat 1 178 0 2113 261 41 26 chr17 57397965 57398822 -32105731 + L1ME2 LINE L1 6067 6937 -38 22 0 0 0 chr17 57398995 57399017 -32105536 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 57399071 57399099 -32105454 + AT_rich Low_complexity Low_complexity 1 28 0 241 239 227 11 chr17 57399543 57399631 -32104922 - L2 LINE L2 -1 3312 3206 201 294 143 0 chr17 57399993 57400112 -32104441 + L2 LINE L2 3105 3240 -73 191 381 24 0 chr17 57400169 57400253 -32104300 + MIR SINE MIR 60 145 -63 370 343 104 15 chr17 57402064 57402265 -32102288 - MIR SINE MIR -10 252 34 227 335 110 52 chr17 57402669 57402842 -32101711 + L3 LINE CR1 1389 1571 -6 671 295 43 30 chr17 57403546 57403848 -32100705 - L1ME3A LINE L1 -14 6156 5851 21 0 0 0 chr17 57403962 57403983 -32100570 + AT_rich Low_complexity Low_complexity 1 21 0 999 186 72 13 chr17 57403995 57404232 -32100321 + L1MA3 LINE L1 6032 6282 -23 984 264 94 24 chr17 57404271 57404737 -32099816 + L1ME LINE L1 4644 5142 -1004 277 135 11 45 chr17 57404755 57404844 -32099709 + GA-rich Low_complexity Low_complexity 2 87 0 2099 124 100 0 chr17 57404857 57405188 -32099365 + THE1B LTR MaLR 1 364 0 10652 114 3 27 chr17 57405188 57406807 -32097746 + THE1B-int LTR MaLR 1 1580 0 2528 128 0 0 chr17 57406811 57407171 -32097382 + THE1B LTR MaLR 5 364 0 402 268 95 14 chr17 57407193 57407474 -32097079 + L1ME LINE L1 5215 5514 -648 946 191 51 0 chr17 57407796 57408032 -32096521 - L1MA8 LINE L1 0 6291 6044 1229 152 53 33 chr17 57408032 57408275 -32096278 + L1MA8 LINE L1 5743 5990 -301 616 107 33 8 chr17 57409226 57409348 -32095205 + CT-rich Low_complexity Low_complexity 2 126 0 568 306 72 5 chr17 57411751 57411973 -32092580 + L2 LINE L2 2496 2732 -582 541 245 27 15 chr17 57412162 57412382 -32092171 + L1M4 LINE L1 5201 5422 -745 360 356 39 70 chr17 57412683 57413014 -32091539 - L2 LINE L2 -36 3236 2916 1540 177 59 129 chr17 57413198 57413741 -32090812 + MLT1D LTR MaLR 1 505 0 278 327 42 67 chr17 57413895 57414060 -32090493 + MIR SINE MIR 20 180 -82 189 400 15 31 chr17 57416034 57416164 -32088389 + MIR3 SINE MIR 31 158 -50 2185 94 7 3 chr17 57416460 57416757 -32087796 - AluSc SINE Alu -11 298 1 1522 201 26 0 chr17 57417515 57417784 -32086769 + L1PA12 LINE L1 6 281 -7300 5215 136 17 13 chr17 57417784 57418869 -32085684 + L1PA13 LINE L1 5059 6151 -12 1810 161 150 3 chr17 57418888 57419071 -32085482 + MSTA LTR MaLR 6 161 -267 228 35 0 0 chr17 57419071 57419100 -32085453 + (TC)n Simple_repeat Simple_repeat 1 29 0 1810 161 150 3 chr17 57419100 57419283 -32085270 + MSTA LTR MaLR 161 426 -2 200 336 70 14 chr17 57420031 57420174 -32084379 + L2 LINE L2 2206 2356 -958 2214 117 3 0 chr17 57420218 57420526 -32084027 - AluSx SINE Alu -3 309 1 1032 105 0 0 chr17 57420530 57420663 -32083890 - AluSq/x SINE Alu -180 133 1 244 318 83 93 chr17 57420675 57421074 -32083479 + L2 LINE L2 2404 2798 -516 261 395 56 5 chr17 57421160 57421355 -32083198 + L2 LINE L2 2875 3079 -193 451 150 60 80 chr17 57421432 57421532 -32083021 - MER63 DNA MER1_type -313 749 26 435 298 65 20 chr17 57421796 57422041 -32082512 + MER41B LTR ERV1 175 430 -205 31 26 0 0 chr17 57423154 57423192 -32081361 + AT_rich Low_complexity Low_complexity 1 38 0 234 70 0 88 chr17 57423346 57423403 -32081150 + (TTTTTA)n Simple_repeat Simple_repeat 2 53 0 7327 173 22 18 chr17 57423411 57425049 -32079504 - L1PB1 LINE L1 -5 6146 4496 2136 106 7 0 chr17 57425049 57425341 -32079212 - AluY SINE Alu -17 294 1 7327 173 22 18 chr17 57425341 57426227 -32078326 - L1PB1 LINE L1 -1655 4496 3615 673 210 62 25 chr17 57426448 57426610 -32077943 + MLT2B2 LTR ERVL 312 479 -36 222 129 0 43 chr17 57426621 57426691 -32077862 + (TA)n Simple_repeat Simple_repeat 1 67 0 304 88 41 0 chr17 57426744 57426798 -32077755 + MLT2D LTR ERVL 364 413 -1 451 293 131 46 chr17 57427609 57427960 -32076593 - MLT1K LTR MaLR -3 585 205 423 153 7 51 chr17 57428141 57428278 -32076275 + GA-rich Low_complexity Low_complexity 2 132 0 227 296 92 20 chr17 57428474 57428572 -32075981 + MIR SINE MIR 86 190 -72 22 35 0 0 chr17 57428942 57428971 -32075582 + AT_rich Low_complexity Low_complexity 1 29 0 200 141 0 94 chr17 57429004 57429068 -32075485 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 21 89 0 0 chr17 57429837 57429893 -32074660 + AT_rich Low_complexity Low_complexity 1 56 0 307 324 138 22 chr17 57430109 57430334 -32074219 + MIR SINE MIR 6 256 -6 272 180 0 0 chr17 57430470 57430520 -32074033 - MLT2B1 LTR ERVL -2 518 469 408 180 24 12 chr17 57430581 57430695 -32073858 - MLT2B2 LTR ERVL -298 116 1 24 53 0 0 chr17 57431028 57431066 -32073487 + AT_rich Low_complexity Low_complexity 1 38 0 275 333 38 49 chr17 57431119 57431386 -32073167 - HAL1 LINE L1 -490 2017 1754 272 249 155 82 chr17 57431463 57431953 -32072600 - HAL1 LINE L1 -892 1615 1090 653 167 25 25 chr17 57431968 57432088 -32072465 - FLAM_C SINE Alu -12 131 12 577 281 21 16 chr17 57432108 57432300 -32072253 - L1ME1 LINE L1 -5 6161 5969 * 1389 248 59 14 chr17 57432288 57432848 -32071705 + L1MD1 LINE L1 2810 3394 -2752 * 3573 174 36 92 chr17 57432845 57433846 -32070707 + L1MD1 LINE L1 5298 6242 0 218 378 20 0 chr17 57435256 57435354 -32069199 - MIR3 SINE MIR -10 198 99 2678 161 188 51 chr17 57435716 57436445 -32068108 + Tigger3b DNA MER2_type 1 829 -402 26 30 0 0 chr17 57436644 57436677 -32067876 + AT_rich Low_complexity Low_complexity 1 33 0 2090 105 30 0 chr17 57437633 57437928 -32066625 - AluSx SINE Alu -8 304 1 52 50 0 0 chr17 57438345 57438425 -32066128 + AT_rich Low_complexity Low_complexity 1 80 0 1788 208 42 2 chr17 57438473 57438881 -32065672 - L1 LINE L1 -2382 3764 3341 4805 165 35 47 chr17 57438882 57440676 -32063877 + L1MA6 LINE L1 4534 6296 -4 21 0 0 0 chr17 57443682 57443703 -32060850 + AT_rich Low_complexity Low_complexity 1 21 0 22 88 0 0 chr17 57444805 57444862 -32059691 + AT_rich Low_complexity Low_complexity 1 57 0 575 244 195 13 chr17 57447222 57447303 -32057250 + LTR37A LTR ERV1 41 106 -320 2427 70 0 3 chr17 57447303 57447604 -32056949 + AluY SINE Alu 1 300 -11 575 244 195 13 chr17 57447604 57447712 -32056841 + LTR37A LTR ERV1 106 193 -233 213 65 0 0 chr17 57447712 57447743 -32056810 + (TG)n Simple_repeat Simple_repeat 2 32 0 575 244 195 13 chr17 57447743 57447860 -32056693 + LTR37A LTR ERV1 193 404 -22 627 115 0 0 chr17 57448133 57448220 -32056333 - FLAM_A SINE Alu -20 122 36 334 381 43 9 chr17 57448222 57448453 -32056100 + MIR SINE MIR 13 251 -11 259 294 24 0 chr17 57448766 57448851 -32055702 - MIR SINE MIR -97 165 79 325 228 139 0 chr17 57451203 57451304 -32053249 - LTR33 LTR ERVL -3 518 404 279 291 6 31 chr17 57451397 57451565 -32052988 - LTR33 LTR ERVL -271 250 46 193 341 98 24 chr17 57451585 57451708 -32052845 + L2 LINE L2 3137 3268 -4 244 258 16 0 chr17 57452488 57452550 -32052003 + MIR SINE MIR 82 144 -118 1068 314 79 7 chr17 57452732 57453187 -32051366 - L1MEc LINE L1 -5879 517 30 383 346 56 12 chr17 57453651 57453992 -32050561 + L1MEc LINE L1 636 991 -5405 41 36 0 0 chr17 57454025 57454080 -32050473 + AT_rich Low_complexity Low_complexity 1 55 0 235 238 0 79 chr17 57454080 57454143 -32050410 + L2 LINE L2 3251 3308 -5 541 335 140 12 chr17 57454405 57454727 -32049826 - L2 LINE L2 -1 3312 2950 410 312 179 3 chr17 57454781 57455110 -32049443 - LTR50 LTR ERVL -2 793 326 956 199 12 0 chr17 57455403 57455574 -32048979 + MER2 DNA MER2_type 1 173 -172 259 246 16 0 chr17 57455674 57455735 -32048818 + MER2 DNA MER2_type 280 341 -4 1821 335 97 41 chr17 57455735 57457296 -32047257 - L2 LINE L2 -503 2811 1164 796 341 96 19 chr17 57457379 57458179 -32046374 + L2 LINE L2 2432 3288 -25 349 268 24 73 chr17 57458350 57458473 -32046080 + L2 LINE L2 3197 3313 0 1842 186 93 32 chr17 57459127 57459589 -32044964 + LTR2B LTR ERV1 1 490 0 215 305 19 76 chr17 57460095 57460200 -32044353 + MER5A DNA MER1_type 61 159 -30 24 85 0 0 chr17 57460225 57460284 -32044269 + AT_rich Low_complexity Low_complexity 1 59 0 2344 98 0 0 chr17 57460285 57460590 -32043963 + AluSc SINE Alu 1 305 -4 215 203 17 0 chr17 57461058 57461117 -32043436 + (TA)n Simple_repeat Simple_repeat 1 60 0 5106 211 57 73 chr17 57461125 57463044 -32041509 - L1MC2 LINE L1 -14 6330 4472 5778 109 18 0 chr17 57463574 57464467 -32040086 - L1PA13 LINE L1 -16 6147 5234 1181 158 15 20 chr17 57464503 57464706 -32039847 - MER49 LTR ERV1 -717 206 5 2155 169 3 3 chr17 57465570 57465932 -32038621 - THE1B LTR MaLR -2 362 1 1543 80 5 0 chr17 57466719 57466931 -32037622 + L1PA7 LINE L1 5939 6151 -3 183 42 0 0 chr17 57467032 57467056 -32037497 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 531 0 0 0 chr17 57467447 57467506 -32037047 + (TTATG)n Simple_repeat Simple_repeat 2 60 0 734 116 9 0 chr17 57467506 57467618 -32036935 - AluSg/x SINE Alu -24 288 176 271 342 18 9 chr17 57468990 57469101 -32035452 - MIR SINE MIR -16 246 135 24 0 0 0 chr17 57469283 57469307 -32035246 + AT_rich Low_complexity Low_complexity 1 24 0 2319 78 3 0 chr17 57469492 57469801 -32034752 - AluY SINE Alu -1 310 1 635 316 88 11 chr17 57469806 57470355 -32034198 - L1MEc LINE L1 -3270 2945 2343 2591 55 0 0 chr17 57470355 57470665 -32033888 - AluY SINE Alu -1 310 1 635 316 88 11 chr17 57470665 57470728 -32033825 - L1MEc LINE L1 -3872 2343 2286 323 344 53 16 chr17 57470754 57470943 -32033610 - L1MEc LINE L1 -4107 2289 2094 348 345 43 39 chr17 57471260 57471518 -32033035 - L2 LINE L2 -19 3294 3036 398 345 38 34 chr17 57471599 57471837 -32032716 + MLT1J1 LTR MaLR 204 442 -4 251 431 35 9 chr17 57471848 57472080 -32032473 - L2 LINE L2 -528 2786 2549 1000 208 12 45 chr17 57472443 57472732 -32031821 - L1ME LINE L1 -654 5512 5225 1801 204 3 3 chr17 57472738 57473077 -32031476 + MER2 DNA MER2_type 7 345 0 1849 267 58 50 chr17 57473174 57473901 -32030652 + L1ME1 LINE L1 5415 6147 -19 22 0 0 0 chr17 57474184 57474206 -32030347 + AT_rich Low_complexity Low_complexity 1 22 0 234 295 93 58 chr17 57474593 57474732 -32029821 + L2 LINE L2 3168 3311 -2 436 343 40 32 chr17 57476861 57477109 -32027444 + MIR SINE MIR 13 262 0 288 297 9 27 chr17 57478182 57478293 -32026260 + MIR SINE MIR 128 236 -26 304 349 19 0 chr17 57478491 57478597 -32025956 - MIR SINE MIR -112 150 43 626 101 0 0 chr17 57478866 57478955 -32025598 + AluY SINE Alu 206 294 -17 24 0 0 0 chr17 57480032 57480056 -32024497 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr17 57482218 57482263 -32022290 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr17 57482967 57482992 -32021561 + AT_rich Low_complexity Low_complexity 1 25 0 14738 161 18 36 chr17 57482993 57485749 -32018804 + Tigger2 DNA MER2_type 3 2707 -11 24 53 0 0 chr17 57486317 57486355 -32018198 + AT_rich Low_complexity Low_complexity 1 38 0 30 0 0 0 chr17 57486414 57486444 -32018109 + AT_rich Low_complexity Low_complexity 1 30 0 14202 194 31 11 chr17 57487702 57492659 -32011894 - L1PB1 LINE L1 0 6867 1795 2010 121 0 0 chr17 57492659 57492966 -32011587 - AluSx SINE Alu 0 311 5 14202 194 31 11 chr17 57492966 57493379 -32011174 - L1PB1 LINE L1 -5072 1795 1392 284 200 14 0 chr17 57493376 57493446 -32011107 - L1PB1 LINE L1 -6666 197 127 * 184 288 0 34 chr17 57496504 57496563 -32007990 + MER5A DNA MER1_type 111 167 -22 21 36 0 0 chr17 57496944 57496972 -32007581 + AT_rich Low_complexity Low_complexity 1 28 0 187 275 0 0 chr17 57497157 57497197 -32007356 - L2 LINE L2 -47 3266 3227 1794 107 107 7 chr17 57497398 57497670 -32006883 + AluSx SINE Alu 1 299 -13 1904 149 3 3 chr17 57498150 57498439 -32006114 - AluSx SINE Alu -23 289 1 1775 140 59 51 chr17 57498989 57499199 -32005354 - THE1C LTR MaLR -1 374 158 2103 136 0 0 chr17 57499199 57499507 -32005046 + AluSx SINE Alu 3 310 -2 1775 140 59 51 chr17 57499507 57499667 -32004886 - THE1C LTR MaLR -217 158 1 897 230 5 5 chr17 57500019 57500206 -32004347 + MER5A DNA MER1_type 2 188 -1 24 53 0 0 chr17 57500690 57500728 -32003825 + AT_rich Low_complexity Low_complexity 1 38 0 530 378 55 5 chr17 57501353 57501570 -32002983 + MIR SINE MIR 15 242 -20 23 0 0 0 chr17 57502610 57502633 -32001920 + AT_rich Low_complexity Low_complexity 1 23 0 208 208 130 52 chr17 57502936 57503013 -32001540 - MIR SINE MIR -29 233 151 245 246 0 0 chr17 57503050 57503107 -32001446 - L1ME2 LINE L1 -44 6120 6064 416 237 206 89 chr17 57503763 57504079 -32000474 - LTR16A1 LTR ERVL 0 457 105 187 380 22 11 chr17 57504251 57504343 -32000210 - MIR SINE MIR -119 143 51 1877 221 106 18 chr17 57504591 57505025 -31999528 + L1PA13 LINE L1 1 472 -6315 350 304 30 0 chr17 57505024 57505159 -31999394 - L1MCa LINE L1 -1802 4762 4624 * 711 210 74 41 chr17 57505150 57505393 -31999160 - L1M4 LINE L1 -912 5652 5402 557 274 43 18 chr17 57505398 57505679 -31998874 - L1MCa LINE L1 -3012 3552 3265 3031 150 18 33 chr17 57505679 57506278 -31998275 - L1PA16 LINE L1 -3 6163 5574 1328 118 30 15 chr17 57506279 57506541 -31998012 + L1PA16 LINE L1 5281 5546 -620 1768 257 77 38 chr17 57506557 57507357 -31997196 - L1MCa LINE L1 -3316 3248 2481 1643 137 3 62 chr17 57507357 57507664 -31996889 - AluJb SINE Alu -20 292 4 1768 257 77 38 chr17 57507664 57508512 -31996041 - L1MCa LINE L1 -4083 2481 1396 398 145 12 48 chr17 57508525 57508608 -31995945 - MADE1 DNA Mariner 0 80 1 5095 136 18 8 chr17 57508732 57509221 -31995332 - L1MA5A LINE L1 -1 6296 5794 384 22 0 0 chr17 57509221 57509266 -31995287 + (TG)n Simple_repeat Simple_repeat 2 46 0 5095 136 18 8 chr17 57509266 57509635 -31994918 - L1MA5A LINE L1 -503 5794 5430 862 227 42 51 chr17 57509635 57509912 -31994641 - L1MCa LINE L1 -5794 358 3 231 36 0 0 chr17 57510492 57510520 -31994033 + (TC)n Simple_repeat Simple_repeat 1 28 0 504 275 14 52 chr17 57510912 57511150 -31993403 + L1ME1 LINE L1 5948 6334 0 602 304 122 27 chr17 57511182 57511671 -31992882 + L1ME3A LINE L1 5185 5719 -451 1318 271 17 8 chr17 57511708 57512059 -31992494 + MLT1A2 LTR MaLR 1 354 -20 1996 195 69 15 chr17 57512062 57512468 -31992085 - MSTA LTR MaLR 0 428 1 310 227 0 34 chr17 57512532 57512620 -31991933 + L1ME3A LINE L1 5841 5925 -245 1394 93 5 0 chr17 57512918 57513111 -31991442 + MLT2A2 LTR ERVL 1 194 -259 2397 79 0 3 chr17 57513113 57513418 -31991135 + AluSc SINE Alu 3 306 -3 250 248 50 28 chr17 57514491 57514577 -31989976 - MLT1D LTR MaLR -424 81 3 383 321 104 0 chr17 57515036 57515170 -31989383 - MIR SINE MIR -18 244 97 2079 199 6 31 chr17 57515182 57515699 -31988854 + L1PB1 LINE L1 4264 4767 -1379 3378 124 19 2 chr17 57515701 57516338 -31988215 + L1PB1 LINE L1 5141 5785 -366 1859 142 16 7 chr17 57516347 57516650 -31987903 + AluSp SINE Alu 4 309 -4 249 169 0 0 chr17 57516658 57516717 -31987836 + (TA)n Simple_repeat Simple_repeat 2 60 0 2207 143 3 8 chr17 57516723 57517094 -31987459 + L1PB1 LINE L1 5783 6151 0 6727 58 0 2 chr17 57517119 57518406 -31986147 - L1PA7 LINE L1 -1 6153 4866 505 172 0 0 chr17 57518407 57518494 -31986059 + L1PA7 LINE L1 4776 4862 -1284 299 343 59 0 chr17 57518494 57518596 -31985957 - MIR SINE MIR -153 109 2 1215 199 74 93 chr17 57518654 57519020 -31985533 + MLT1A1 LTR MaLR 1 359 -6 237 167 0 19 chr17 57519020 57519074 -31985479 - L2 LINE L2 -1019 2295 2243 514 242 28 71 chr17 57521028 57521210 -31983343 + MIR SINE MIR 72 245 -17 2061 106 67 3 chr17 57521287 57521618 -31982935 - L1PA13 LINE L1 -18 6145 5794 849 103 16 0 chr17 57521618 57521744 -31982809 + L1PA13 LINE L1 5674 5801 -367 1052 276 63 94 chr17 57523026 57524084 -31980469 - L1ME3A LINE L1 -31 6139 5119 302 200 0 17 chr17 57524876 57524936 -31979617 + Tigger5 DNA MER2_type 2265 2323 0 324 196 76 11 chr17 57524956 57525048 -31979505 - L1M4 LINE L1 -829 5317 5220 33 0 0 0 chr17 57525196 57525229 -31979324 + AT_rich Low_complexity Low_complexity 1 33 0 1958 74 7 4 chr17 57525229 57525500 -31979053 - L1PA8 LINE L1 -6 6166 5895 428 225 85 16 chr17 57525764 57525893 -31978660 + L1ME1 LINE L1 4788 4925 -1221 418 272 37 69 chr17 57525888 57526134 -31978419 + L1ME1 LINE L1 5326 5563 -603 * 1186 253 9 9 chr17 57526123 57526439 -31978114 + L1ME1 LINE L1 5800 6115 -51 2026 173 70 21 chr17 57526447 57526835 -31977718 - MSTA LTR MaLR -19 409 3 3783 187 41 45 chr17 57526858 57527081 -31977472 - L1M4 LINE L1 -1194 4952 4730 2979 185 27 25 chr17 57527081 57527796 -31976757 - L1MA8 LINE L1 -11 6280 5565 3783 187 41 45 chr17 57527796 57528498 -31976055 - L1M4 LINE L1 -1416 4730 4031 804 244 37 12 chr17 57528496 57528681 -31975872 + L1MA7 LINE L1 4943 5137 -1009 * 423 0 0 0 chr17 57528681 57528728 -31975825 + (CA)n Simple_repeat Simple_repeat 2 48 0 804 244 37 12 chr17 57528728 57528784 -31975769 + L1MA7 LINE L1 5137 5190 -956 786 208 0 33 chr17 57528784 57528847 -31975706 + AluJb SINE Alu 136 200 -112 1952 133 15 70 chr17 57528847 57529244 -31975309 - THE1C LTR MaLR 0 375 1 786 208 0 33 chr17 57529244 57529363 -31975190 + AluJb SINE Alu 200 312 0 321 163 47 23 chr17 57529363 57529449 -31975104 + L1MA7 LINE L1 5176 5263 -883 474 65 0 0 chr17 57529450 57529512 -31975041 + (TA)n Simple_repeat Simple_repeat 1 62 0 8103 192 20 25 chr17 57529549 57531953 -31972600 + L1MA4A LINE L1 3654 6054 -249 1689 128 4 0 chr17 57531965 57532223 -31972330 - L1PA16 LINE L1 -329 5837 5579 1260 124 5 16 chr17 57532223 57532417 -31972136 - THE1C LTR MaLR -149 226 35 1615 251 2 5 chr17 57532417 57532836 -31971717 - L1 LINE L1 -1604 4542 4125 * 3808 185 20 57 chr17 57532835 57533152 -31971401 + L1MA7 LINE L1 5335 5662 -629 2121 87 0 24 chr17 57533152 57533487 -31971066 + AluSc SINE Alu 1 328 0 3808 185 20 57 chr17 57533487 57534189 -31970364 + L1MA7 LINE L1 5662 6286 -5 26 30 0 0 chr17 57534571 57534604 -31969949 + AT_rich Low_complexity Low_complexity 1 33 0 29 28 0 0 chr17 57535710 57535746 -31968807 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr17 57535871 57535901 -31968652 + AT_rich Low_complexity Low_complexity 1 30 0 1470 212 119 6 chr17 57536273 57536618 -31967935 + MER89 LTR ERV1 176 559 0 239 404 56 19 chr17 57536683 57537007 -31967546 + L2 LINE L2 2636 2971 -343 276 364 95 24 chr17 57537970 57538223 -31966330 - L2 LINE L2 -967 2347 2077 511 320 52 81 chr17 57538490 57539116 -31965437 - L2 LINE L2 -71 3242 2648 8446 229 65 23 chr17 57539473 57539891 -31964662 + L1MC3 LINE L1 4533 4932 -2853 249 108 0 0 chr17 57539891 57539928 -31964625 + (CA)n Simple_repeat Simple_repeat 1 37 0 8446 229 65 23 chr17 57539928 57540841 -31963712 + L1MC3 LINE L1 4932 5805 -1980 1066 265 126 28 chr17 57540841 57541301 -31963252 - MLT1D LTR MaLR 0 505 1 8446 229 65 23 chr17 57541301 57542956 -31961597 + L1MC3 LINE L1 5805 7632 -153 328 271 136 13 chr17 57543333 57543488 -31961065 + MIR SINE MIR 89 262 0 1287 215 38 3 chr17 57544023 57544143 -31960410 + AluJo SINE Alu 1 115 -197 207 0 0 0 chr17 57544143 57544166 -31960387 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1287 215 38 3 chr17 57544166 57544338 -31960215 + AluJo SINE Alu 115 303 -9 1659 192 20 0 chr17 57545662 57545964 -31958589 + AluJb SINE Alu 2 309 -3 304 260 7 21 chr17 57546179 57546298 -31958255 + L1ME LINE L1 5338 5449 -672 252 86 0 0 chr17 57546430 57546465 -31958088 + (CA)n Simple_repeat Simple_repeat 2 36 0 259 234 13 0 chr17 57547168 57547245 -31957308 + L1ME LINE L1 981 1058 -5147 1411 220 36 56 chr17 57547339 57547408 -31957145 - MLT1B LTR MaLR -4 386 317 2287 98 0 6 chr17 57547408 57547723 -31956830 - AluSq SINE Alu 0 313 1 1411 220 36 56 chr17 57547723 57548044 -31956509 - MLT1B LTR MaLR -73 317 4 236 259 27 27 chr17 57548110 57548222 -31956331 + L1ME LINE L1 1049 1160 -5055 329 315 113 36 chr17 57548404 57548626 -31955927 + L1ME LINE L1 1580 1818 -4578 845 295 134 25 chr17 57548858 57549256 -31955297 + L1ME LINE L1 2179 2532 -3683 1747 130 68 20 chr17 57549256 57549548 -31955005 + AluSx SINE Alu 1 306 -6 845 295 134 25 chr17 57549548 57550041 -31954512 + L1ME LINE L1 2532 3167 -3048 7591 27 5 0 chr17 57550041 57551504 -31953049 + L1PA3 LINE L1 4689 6155 0 845 295 134 25 chr17 57551504 57551635 -31952918 + L1ME LINE L1 3167 3282 -2933 2522 54 0 16 chr17 57551746 57552061 -31952492 - AluY SINE Alu -1 310 1 242 313 45 0 chr17 57552061 57552173 -31952380 + L1ME3A LINE L1 6042 6158 -12 25 0 0 0 chr17 57552443 57552468 -31952085 + AT_rich Low_complexity Low_complexity 1 25 0 382 364 37 42 chr17 57553895 57554268 -31950285 - ERVL LTR ERVL -1743 3742 3370 249 33 0 0 chr17 57554268 57554298 -31950255 + (CAA)n Simple_repeat Simple_repeat 1 30 0 382 364 37 42 chr17 57554298 57554380 -31950173 - ERVL LTR ERVL -2115 3370 3289 351 370 66 19 chr17 57554549 57554806 -31949747 - ERVL LTR ERVL -1910 3086 2818 5482 169 69 20 chr17 57554818 57555969 -31948584 + Tigger3b DNA MER2_type 1 1207 -24 454 171 26 0 chr17 57555967 57556043 -31948510 - MSTB1 LTR MaLR -354 78 1 * 753 281 67 13 chr17 57556074 57556413 -31948140 - ERVL LTR ERVL -3005 2650 2301 1564 186 0 24 chr17 57556532 57556828 -31947725 - AluJo SINE Alu -13 299 11 22 0 0 0 chr17 57557446 57557468 -31947085 + AT_rich Low_complexity Low_complexity 1 22 0 686 308 67 9 chr17 57558446 57558761 -31945792 + L1ME LINE L1 320 652 -5418 304 274 110 44 chr17 57558848 57559166 -31945387 + L1ME LINE L1 764 1102 -4978 2833 154 31 4 chr17 57559229 57559743 -31944810 - L1MA4 LINE L1 -5 6295 5768 243 0 0 0 chr17 57559907 57559934 -31944619 + (TTG)n Simple_repeat Simple_repeat 1 27 0 294 289 21 63 chr17 57560062 57560204 -31944349 - MLT1I LTR MaLR -206 203 68 542 333 37 5 chr17 57560336 57560552 -31944001 + MER58A DNA MER1_type 1 223 -1 22 94 0 0 chr17 57560988 57561052 -31943501 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr17 57561182 57561203 -31943350 + AT_rich Low_complexity Low_complexity 1 21 0 14834 227 50 20 chr17 57562123 57567207 -31937346 + L1PA15 LINE L1 1 4928 -1888 1642 203 0 3 chr17 57567207 57567508 -31937045 - AluJb SINE Alu -12 300 1 14834 227 50 20 chr17 57567508 57568602 -31935951 + L1PA15 LINE L1 4928 6417 -399 2110 127 39 36 chr17 57568602 57568965 -31935588 + THE1B LTR MaLR 1 364 0 14834 227 50 20 chr17 57568965 57569362 -31935191 + L1PA15 LINE L1 6417 6800 -16 35 41 0 0 chr17 57569362 57569411 -31935142 + AT_rich Low_complexity Low_complexity 1 49 0 217 290 57 57 chr17 57569485 57569609 -31934944 - L2 LINE L2 -27 3286 3163 21 0 0 0 chr17 57569934 57569955 -31934598 + AT_rich Low_complexity Low_complexity 1 21 0 282 310 0 0 chr17 57570919 57570990 -31933563 - L2 LINE L2 -9 3263 3193 326 226 9 0 chr17 57571142 57571248 -31933305 + GA-rich Low_complexity Low_complexity 2 108 0 475 292 55 13 chr17 57571358 57571594 -31932959 - HAL1 LINE L1 -833 1674 1429 614 321 25 21 chr17 57571739 57571979 -31932574 + MIR SINE MIR 1 241 -21 497 256 47 38 chr17 57572020 57572231 -31932322 - HAL1 LINE L1 -1325 1182 970 2264 56 0 43 chr17 57572523 57572827 -31931726 - AluY SINE Alu -20 291 1 187 442 22 6 chr17 57573136 57573317 -31931236 - MIR3 SINE MIR -10 198 15 261 208 135 0 chr17 57573851 57573947 -31930606 - L1MC4 LINE L1 -1320 6722 6614 306 73 0 0 chr17 57575389 57575430 -31929123 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 378 289 102 53 chr17 57575744 57576180 -31928373 + L1ME4a LINE L1 5609 6121 0 3916 97 5 14 chr17 57576395 57576951 -31927602 + L1PA10 LINE L1 5609 6159 -9 1309 216 46 38 chr17 57576963 57577329 -31927224 - L1M4 LINE L1 -1929 4217 3849 38 39 0 0 chr17 57578079 57578131 -31926422 + AT_rich Low_complexity Low_complexity 1 52 0 2125 117 7 10 chr17 57578171 57578479 -31926074 - AluSx SINE Alu -5 307 1 240 318 20 12 chr17 57578571 57578668 -31925885 - MIR SINE MIR -92 117 19 644 272 68 5 chr17 57578861 57579067 -31925486 - MER20 DNA MER1_type 0 219 1 209 347 67 13 chr17 57579674 57579749 -31924804 + L2 LINE L2 3201 3279 -34 26 0 0 0 chr17 57581117 57581143 -31923410 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr17 57582942 57582964 -31921589 + AT_rich Low_complexity Low_complexity 1 22 0 307 264 23 0 chr17 57582989 57583076 -31921477 + MIR SINE MIR 126 214 -48 29 78 0 0 chr17 57583107 57583171 -31921382 + AT_rich Low_complexity Low_complexity 1 64 0 323 273 39 31 chr17 57583240 57583368 -31921185 - L2 LINE L2 -5 3308 3180 356 248 50 0 chr17 57583482 57583583 -31920970 - MER53 DNA DNA -83 106 1 373 323 74 49 chr17 57583590 57583920 -31920633 - L2 LINE L2 -221 3051 2700 342 311 28 9 chr17 57584420 57584526 -31920027 + MIR SINE MIR 43 150 -112 187 136 45 45 chr17 57585075 57585119 -31919434 + L2 LINE L2 3229 3272 0 208 171 24 0 chr17 57587750 57587791 -31916762 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 23 33 0 0 chr17 57588602 57588632 -31915921 + AT_rich Low_complexity Low_complexity 1 30 0 334 348 70 8 chr17 57588792 57588957 -31915596 - MIR SINE MIR -61 147 7 304 290 60 57 chr17 57589561 57589809 -31914744 + L1ME4a LINE L1 5858 6106 -15 282 219 19 67 chr17 57590474 57590579 -31913974 + LTR67 LTR ERVL 458 557 0 182 311 178 11 chr17 57590999 57591089 -31913464 - L2 LINE L2 -5 3308 3204 222 91 0 0 chr17 57591267 57591300 -31913253 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 244 303 40 10 chr17 57591379 57591478 -31913075 + L3 LINE CR1 650 751 -826 2200 136 50 21 chr17 57591561 57591979 -31912574 - L1PA16 LINE L1 0 6166 5737 2095 107 7 16 chr17 57592028 57592338 -31912215 + AluSx SINE Alu 1 307 -5 180 368 142 0 chr17 57592565 57592720 -31911833 + L3 LINE CR1 1103 1279 -298 209 373 49 35 chr17 57593105 57593247 -31911306 + L3 LINE CR1 1426 1569 -8 454 278 136 19 chr17 57593444 57593606 -31910947 + MIR SINE MIR 23 203 -59 327 109 16 16 chr17 57593630 57593694 -31910859 + L1MA1 LINE L1 6081 6144 -158 464 303 37 31 chr17 57593840 57594164 -31910389 - L1M4 LINE L1 -1743 4403 4078 595 303 133 22 chr17 57594182 57594991 -31909562 - L1M4 LINE L1 -2147 3999 3101 2188 98 7 3 chr17 57595059 57595355 -31909198 - AluSc SINE Alu -6 303 7 2689 7 0 0 chr17 57595727 57596021 -31908532 - AluYa5 SINE Alu -17 294 1 28 0 0 0 chr17 57596103 57596131 -31908422 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 57596314 57596349 -31908204 + AT_rich Low_complexity Low_complexity 1 35 0 444 309 89 44 chr17 57596730 57597226 -31907327 - L1MC/D LINE L1 -1987 5821 5304 323 286 11 11 chr17 57598417 57598525 -31906028 - MIR SINE MIR -64 144 37 202 259 19 0 chr17 57598630 57598738 -31905815 + (TA)n Simple_repeat Simple_repeat 1 110 0 533 56 0 0 chr17 57598802 57598873 -31905680 + L1PA3 LINE L1 6082 6152 -3 456 284 146 17 chr17 57601265 57601621 -31902932 + L1ME4a LINE L1 5484 5885 -236 315 212 106 95 chr17 57601637 57601826 -31902727 + L1ME4a LINE L1 5924 6114 -7 1004 185 165 28 chr17 57602050 57602299 -31902254 - L1MA6 LINE L1 -187 6113 5831 28 48 0 0 chr17 57602627 57602669 -31901884 + AT_rich Low_complexity Low_complexity 1 42 0 2143 81 10 3 chr17 57602726 57603033 -31901520 - L1MA1 LINE L1 -136 6166 5858 373 326 62 84 chr17 57603146 57603563 -31900990 + L1M2a LINE L1 4 411 -6757 508 286 68 28 chr17 57603664 57603912 -31900641 + L1M2a LINE L1 1842 2099 -5069 1375 192 14 21 chr17 57603914 57604342 -31900211 - L1MA6 LINE L1 -5 6295 5831 3539 259 64 26 chr17 57604705 57605247 -31899306 + L1MA9 LINE L1 1379 1899 -4949 2621 32 0 13 chr17 57605247 57605561 -31898992 + AluY SINE Alu 1 310 -1 3539 259 64 26 chr17 57605561 57607253 -31897300 + L1MA9 LINE L1 1899 3379 -3469 * 4172 228 22 57 chr17 57607244 57608480 -31896073 + L1MA9 LINE L1 3934 5212 -1802 269 243 9 0 chr17 57608480 57608548 -31896005 + Tigger2 DNA MER2_type 2 59 -2659 4172 228 22 57 chr17 57608548 57608582 -31895971 + L1MA9 LINE L1 5212 5246 -1768 710 254 13 12 chr17 57608582 57608744 -31895809 - MER8 DNA MER2_type -64 175 14 4172 228 22 57 chr17 57608744 57610606 -31893947 + L1MA9 LINE L1 5246 6976 -38 2367 302 48 36 chr17 57610732 57611589 -31892964 + L1PA15 LINE L1 7 873 -5914 644 205 7 13 chr17 57611623 57611774 -31892779 + L1PA15 LINE L1 3013 3162 -3635 * 4629 186 27 15 chr17 57611771 57612417 -31892136 + L1PA15 LINE L1 5418 6055 -761 1809 144 40 72 chr17 57612417 57612791 -31891762 - THE1B LTR MaLR -2 362 1 10322 117 7 33 chr17 57612791 57614412 -31890141 - THE1B-int LTR MaLR 0 1580 1 1900 163 36 30 chr17 57614412 57614774 -31889779 - THE1B LTR MaLR 0 364 1 4629 186 27 15 chr17 57614774 57615504 -31889049 + L1PA15 LINE L1 6054 6814 -2 5785 229 44 25 chr17 57615511 57617288 -31887265 + L1M2 LINE L1 3470 5280 -866 6907 58 5 3 chr17 57617288 57618423 -31886130 + L1PA6 LINE L1 5017 6152 -2 909 158 6 0 chr17 57618432 57618597 -31885956 + L1MA9 LINE L1 3676 3841 -2305 * 990 167 44 87 chr17 57618596 57618871 -31885682 + L1MA9 LINE L1 4511 4773 -1373 623 151 17 8 chr17 57618850 57618969 -31885584 + L1M2 LINE L1 5563 5682 -609 * 4690 57 0 10 chr17 57618969 57619582 -31884971 + L1PA8 LINE L1 5566 6172 0 204 111 0 0 chr17 57619596 57619632 -31884921 + (A)n Simple_repeat Simple_repeat 1 36 0 2380 166 43 0 chr17 57619691 57620131 -31884422 + L1M2 LINE L1 5318 5776 -536 765 202 15 45 chr17 57620132 57620330 -31884223 + L1MA9 LINE L1 4844 5035 -1111 1898 207 81 16 chr17 57620352 57620844 -31883709 + L1MA9 LINE L1 5787 6310 -2 25 31 0 0 chr17 57621120 57621152 -31883401 + AT_rich Low_complexity Low_complexity 1 32 0 296 340 105 31 chr17 57622696 57622858 -31881695 + MER5B DNA MER1_type 1 174 -4 3778 134 39 11 chr17 57624137 57624801 -31879752 - LTR1 LTR ERV1 -102 683 1 21 36 0 0 chr17 57624944 57624972 -31879581 + AT_rich Low_complexity Low_complexity 1 28 0 1159 274 85 29 chr17 57625101 57625653 -31878900 - HAL1 LINE L1 -620 1887 1305 314 291 108 31 chr17 57625692 57625915 -31878638 - HAL1 LINE L1 -1287 1220 981 270 381 22 0 chr17 57625930 57626069 -31878484 - MIR SINE MIR -2 260 119 253 223 0 43 chr17 57626082 57626176 -31878377 - HAL1 LINE L1 -359 2148 2059 33 43 0 0 chr17 57626270 57626317 -31878236 + AT_rich Low_complexity Low_complexity 1 47 0 312 27 0 0 chr17 57626480 57626517 -31878036 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 693 241 43 0 chr17 57626525 57626666 -31877887 - FRAM SINE Alu -35 141 1 261 329 73 24 chr17 57626730 57626894 -31877659 + MIR SINE MIR 88 259 -3 224 303 59 53 chr17 57627340 57627492 -31877061 + L2 LINE L2 3158 3310 -3 29 28 0 0 chr17 57628049 57628085 -31876468 + AT_rich Low_complexity Low_complexity 1 36 0 5815 221 37 13 chr17 57628087 57630826 -31873727 + L1MC1 LINE L1 3522 6333 0 227 31 31 0 chr17 57630904 57630936 -31873617 + (GA)n Simple_repeat Simple_repeat 2 34 0 237 33 0 0 chr17 57631603 57631633 -31872920 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 62 0 0 chr17 57631633 57631665 -31872888 + (GA)n Simple_repeat Simple_repeat 2 33 0 22 56 0 0 chr17 57632578 57632614 -31871939 + AT_rich Low_complexity Low_complexity 1 36 0 613 294 59 57 chr17 57632787 57633313 -31871240 + L1MEd LINE L1 1080 1697 -793 312 295 25 16 chr17 57635709 57635831 -31868722 + MIR SINE MIR 67 189 -73 255 248 62 0 chr17 57635862 57636023 -31868530 + (TTATA)n Simple_repeat Simple_repeat 1 171 0 83 88 0 0 chr17 57636040 57636256 -31868297 + AT_rich Low_complexity Low_complexity 1 216 0 1825 264 38 0 chr17 57636256 57636699 -31867854 + MER74C LTR ERVL 1 460 0 308 284 0 0 chr17 57638404 57638478 -31866075 + L2 LINE L2 3199 3272 0 984 276 33 95 chr17 57639342 57639795 -31864758 - MLT1E2 LTR MaLR -8 618 73 29 0 0 0 chr17 57640182 57640211 -31864342 + AT_rich Low_complexity Low_complexity 1 29 0 292 181 44 0 chr17 57640886 57640972 -31863581 + L1MB4 LINE L1 6079 6179 -1 1023 219 61 45 chr17 57641644 57641955 -31862598 - L1MB8 LINE L1 -9 6169 5854 6401 185 36 29 chr17 57641961 57642308 -31862245 - L1PB4 LINE L1 0 6156 5813 324 0 0 0 chr17 57642308 57642344 -31862209 + (CA)n Simple_repeat Simple_repeat 2 37 0 6401 185 36 29 chr17 57642344 57644534 -31860019 - L1PB4 LINE L1 -343 5813 3611 4405 238 23 16 chr17 57644630 57645864 -31858689 + L1PA13 LINE L1 1224 2481 -4316 1867 208 19 64 chr17 57645864 57646346 -31858207 - LOR1a LTR ERV1 0 497 38 5946 249 37 13 chr17 57646361 57648169 -31856384 + L1PA13 LINE L1 2479 4330 -2467 9589 157 12 21 chr17 57648182 57649874 -31854679 + L1PA15 LINE L1 11 1687 -4459 4474 149 11 12 chr17 57649871 57650634 -31853919 + L1PA15 LINE L1 5401 6162 -3 * 22 35 0 0 chr17 57651276 57651305 -31853248 + AT_rich Low_complexity Low_complexity 1 29 0 2202 122 3 0 chr17 57651634 57651938 -31852615 + AluSq SINE Alu 1 305 -8 1035 280 54 85 chr17 57652375 57652929 -31851624 - L2 LINE L2 -522 2792 2256 1129 198 61 85 chr17 57652985 57653267 -31851286 - MER67C LTR ERV1 -8 506 218 2126 132 121 16 chr17 57653267 57653654 -31850899 + MSTA LTR MaLR 1 428 0 1129 198 61 85 chr17 57653654 57653818 -31850735 - MER67C LTR ERV1 -296 218 85 11669 22 2 4 chr17 57653818 57655969 -31848584 + L1PA5 LINE L1 4003 6154 0 1129 198 61 85 chr17 57655969 57655990 -31848563 - MER67C LTR ERV1 -429 85 65 268 283 0 65 chr17 57656036 57656128 -31848425 - MER67D LTR ERV1 -428 86 1 399 297 31 0 chr17 57656136 57656264 -31848289 + MER94 DNA DNA 1 132 -2 224 310 14 0 chr17 57656984 57657055 -31847498 - L2 LINE L2 0 3313 3242 440 218 23 0 chr17 57657522 57657609 -31846944 + Tigger7 DNA MER2_type 1 89 -616 829 106 18 0 chr17 57657610 57657723 -31846830 + AluSc SINE Alu 174 288 -21 2258 183 21 12 chr17 57657723 57658143 -31846410 + Tigger7 DNA MER2_type 87 510 -1977 565 195 0 0 chr17 57658158 57658245 -31846308 + Tigger7 DNA MER2_type 2401 2487 0 190 267 0 0 chr17 57658246 57658291 -31846262 - L2 LINE L2 -12 3260 3216 313 377 50 15 chr17 57658885 57659145 -31845408 - L2 LINE L2 -595 2719 2451 792 304 66 80 chr17 57659172 57659694 -31844859 + L2 LINE L2 2782 3294 -19 235 313 0 0 chr17 57659841 57659905 -31844648 + (CATA)n Simple_repeat Simple_repeat 3 66 0 2767 19 0 6 chr17 57660442 57660755 -31843798 + AluY SINE Alu 1 311 0 2152 24 0 109 chr17 57663841 57664170 -31840383 - L1PA3 LINE L1 -1505 4641 4349 7671 27 0 0 chr17 57664170 57665695 -31838858 + L1PA3 LINE L1 4628 6152 -3 22 109 0 0 chr17 57666585 57666677 -31837876 + AT_rich Low_complexity Low_complexity 1 92 0 1756 148 82 20 chr17 57666694 57667046 -31837507 + THE1C LTR MaLR 1 374 -1 9131 136 65 4 chr17 57667048 57668537 -31836016 + THE1C-int LTR MaLR 2 1580 0 1841 174 35 14 chr17 57668537 57668904 -31835649 + THE1C LTR MaLR 1 375 0 669 206 8 23 chr17 57669021 57669152 -31835401 + FAM SINE Alu 1 129 -56 192 404 37 18 chr17 57669180 57669289 -31835264 + MIR SINE MIR 41 151 -57 23 0 0 0 chr17 57669756 57669779 -31834774 + AT_rich Low_complexity Low_complexity 1 23 0 423 365 56 25 chr17 57670261 57670584 -31833969 + L2 LINE L2 2645 2977 -337 192 89 44 22 chr17 57670670 57670715 -31833838 + (TA)n Simple_repeat Simple_repeat 1 46 0 21 71 0 0 chr17 57671276 57671318 -31833235 + AT_rich Low_complexity Low_complexity 1 42 0 282 326 44 22 chr17 57672239 57672374 -31832179 + MIR SINE MIR 53 190 -72 658 316 77 4 chr17 57672427 57672661 -31831892 - MIR SINE MIR -10 252 2 513 280 0 0 chr17 57672998 57673105 -31831448 + FAM SINE Alu 20 126 -59 31 26 0 0 chr17 57673119 57673157 -31831396 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr17 57673234 57673263 -31831290 + AT_rich Low_complexity Low_complexity 1 29 0 688 41 10 10 chr17 57673332 57673429 -31831124 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 243 0 0 0 chr17 57673638 57673665 -31830888 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 203 264 36 64 chr17 57673913 57674053 -31830500 - L2 LINE L2 -91 3222 3087 777 320 80 37 chr17 57674099 57674276 -31830277 + L2 LINE L2 2806 2974 -339 4940 100 35 9 chr17 57674276 57675023 -31829530 + MER4E LTR ERV1 1 766 0 777 320 80 37 chr17 57675023 57675177 -31829376 + L2 LINE L2 2974 3120 -193 216 0 0 0 chr17 57675177 57675201 -31829352 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 777 320 80 37 chr17 57675201 57675333 -31829220 + L2 LINE L2 3120 3290 -23 247 346 47 24 chr17 57675914 57676041 -31828512 - L2 LINE L2 0 3272 3143 2574 95 14 3 chr17 57676286 57676644 -31827909 - THE1B LTR MaLR -2 362 1 1824 196 62 35 chr17 57676673 57677066 -31827487 + MLT1C LTR MaLR 1 409 -58 234 0 0 0 chr17 57677066 57677092 -31827461 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1824 196 62 35 chr17 57677092 57677153 -31827400 + MLT1C LTR MaLR 409 467 0 23 33 0 0 chr17 57677715 57677745 -31826808 + AT_rich Low_complexity Low_complexity 1 30 0 751 249 71 73 chr17 57678830 57679176 -31825377 + MLT1H LTR MaLR 195 503 -2 1889 156 3 54 chr17 57680174 57680526 -31824027 + MER1B DNA MER1_type 4 337 0 422 299 81 47 chr17 57680656 57681157 -31823396 + L1MEc LINE L1 2162 2644 -3571 244 288 32 69 chr17 57681326 57681704 -31822849 + L1MEc LINE L1 3452 3815 -2400 348 326 124 48 chr17 57683102 57683393 -31821160 + MLT1J2 LTR MaLR 104 416 -34 210 367 102 0 chr17 57683453 57683551 -31821002 - L2 LINE L2 -9 3263 3156 12297 212 35 17 chr17 57683897 57687870 -31816683 - L1PA16 LINE L1 -8 6861 2963 1899 126 53 0 chr17 57687870 57688155 -31816398 - AluSx SINE Alu -8 304 5 12297 212 35 17 chr17 57688155 57688715 -31815838 - L1PA16 LINE L1 -3906 2963 2415 464 0 18 0 chr17 57688715 57688771 -31815782 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 12297 212 35 17 chr17 57688771 57689983 -31814570 - L1PA16 LINE L1 -4454 2415 1009 355 391 66 8 chr17 57689984 57690227 -31814326 + L2 LINE L2 2654 2910 -404 35 83 0 0 chr17 57692844 57692928 -31811625 + AT_rich Low_complexity Low_complexity 1 84 0 182 343 14 14 chr17 57692986 57693056 -31811497 + MIR SINE MIR 79 148 -114 234 179 0 0 chr17 57693216 57693272 -31811281 + (TA)n Simple_repeat Simple_repeat 1 56 0 2520 171 47 16 chr17 57693402 57694166 -31810387 + L1MA9 LINE L1 5016 5795 -517 258 111 49 25 chr17 57694200 57694281 -31810272 + (TA)n Simple_repeat Simple_repeat 1 83 0 1018 132 2 47 chr17 57694285 57694503 -31810050 + L1MA9 LINE L1 5748 5961 -195 242 139 56 28 chr17 57694517 57694589 -31809964 + (TA)n Simple_repeat Simple_repeat 2 75 0 297 0 0 0 chr17 57694589 57694622 -31809931 + (CA)n Simple_repeat Simple_repeat 2 34 0 2532 155 46 22 chr17 57694624 57695126 -31809427 + L1MA9 LINE L1 5794 6307 -5 1681 173 68 6 chr17 57695255 57695591 -31808962 + MER46B DNA MER2_type 1 232 -4 180 400 126 13 chr17 57696243 57696473 -31808080 - MIR SINE MIR -1 261 6 2406 84 0 0 chr17 57696958 57697256 -31807297 - AluSg SINE Alu -12 298 1 240 167 0 0 chr17 57697366 57697414 -31807139 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr17 57697862 57697883 -31806670 + AT_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr17 57700390 57700448 -31804105 + AT_rich Low_complexity Low_complexity 1 58 0 24 0 0 70 chr17 57700738 57700781 -31803772 + AT_rich Low_complexity Low_complexity 1 40 0 2402 186 57 31 chr17 57701548 57702037 -31802516 - MER68 LTR ERV1 -13 549 48 424 174 132 1 chr17 57702176 57702364 -31802189 + MER63 DNA MER1_type 818 1054 -6 211 343 135 77 chr17 57703780 57704077 -31800476 + L2 LINE L2 2934 3247 -25 21 57 0 0 chr17 57704374 57704409 -31800144 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr17 57705033 57705063 -31799490 + AT_rich Low_complexity Low_complexity 1 30 0 857 325 80 32 chr17 57705169 57705784 -31798769 + MLT2F LTR ERVL 20 663 0 723 245 64 33 chr17 57705995 57706273 -31798280 + L1M4 LINE L1 2492 2777 -3369 193 283 18 0 chr17 57706546 57706659 -31797894 + (TA)n Simple_repeat Simple_repeat 2 116 0 268 257 0 0 chr17 57707147 57707217 -31797336 + MER5A DNA MER1_type 17 86 -103 2137 92 14 0 chr17 57707937 57708246 -31796307 + AluSx SINE Alu 6 318 0 297 315 109 52 chr17 57708934 57709201 -31795352 + L2 LINE L2 3032 3313 0 1346 256 69 42 chr17 57709293 57709917 -31794636 - L1MCc LINE L1 -1909 5032 4392 1746 177 0 16 chr17 57710036 57710385 -31794168 - AluJb SINE Alu 0 344 1 716 206 21 21 chr17 57710586 57710775 -31793778 + MER53 DNA DNA 1 189 0 374 303 80 60 chr17 57711460 57711873 -31792680 - L1MCc LINE L1 -2990 3951 3531 522 285 77 81 chr17 57712217 57712648 -31791905 - MLT1H LTR MaLR -14 535 107 295 310 65 23 chr17 57712803 57713019 -31791534 - L1MCc LINE L1 -5041 1902 1678 1774 153 25 34 chr17 57713021 57713375 -31791178 + THE1C LTR MaLR 1 351 -24 32 26 0 0 chr17 57713444 57713483 -31791070 + AT_rich Low_complexity Low_complexity 1 39 0 328 343 52 57 chr17 57714169 57714607 -31789946 - L1MCc LINE L1 -5965 458 23 390 330 102 31 chr17 57716049 57716373 -31788180 + L2 LINE L2 2967 3313 0 2394 60 3 3 chr17 57716431 57716729 -31787824 - AluY SINE Alu -1 310 13 542 285 92 52 chr17 57716770 57717096 -31787457 - MLT1K LTR MaLR -20 568 230 22 0 0 0 chr17 57718321 57718343 -31786210 + AT_rich Low_complexity Low_complexity 1 22 0 11417 61 0 1 chr17 57718969 57720445 -31784108 - L1PA6 LINE L1 -1055 5091 3618 7123 48 3 0 chr17 57720445 57721509 -31783044 + L1PA6 LINE L1 5111 6177 0 282 116 0 0 chr17 57721756 57721799 -31782754 + (TA)n Simple_repeat Simple_repeat 2 44 0 24 67 0 0 chr17 57721950 57721995 -31782558 + AT_rich Low_complexity Low_complexity 1 45 0 29 43 0 43 chr17 57722049 57722118 -31782435 + AT_rich Low_complexity Low_complexity 1 66 0 234 279 8 25 chr17 57722538 57722573 -31781980 + (TA)n Simple_repeat Simple_repeat 1 35 -85 1931 157 0 0 chr17 57722573 57722878 -31781675 + AluSx SINE Alu 1 305 -7 234 279 8 25 chr17 57722878 57722964 -31781589 + (TA)n Simple_repeat Simple_repeat 35 120 0 24 32 0 0 chr17 57722976 57723007 -31781546 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr17 57723086 57723113 -31781440 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr17 57723221 57723255 -31781298 + AT_rich Low_complexity Low_complexity 1 34 0 475 346 118 22 chr17 57723329 57723841 -31780712 + L1ME3 LINE L1 5256 5828 -334 21 36 0 0 chr17 57723926 57723954 -31780599 + AT_rich Low_complexity Low_complexity 1 28 0 232 77 77 0 chr17 57724171 57724236 -31780317 + (TA)n Simple_repeat Simple_repeat 1 70 0 322 310 0 23 chr17 57724609 57724696 -31779857 + MIR SINE MIR 66 150 -112 234 295 0 0 chr17 57724893 57724954 -31779599 + GA-rich Low_complexity Low_complexity 2 62 0 3256 109 14 16 chr17 57725175 57725687 -31778866 - MER9 LTR ERVK 0 511 1 21 71 0 0 chr17 57726706 57726748 -31777805 + AT_rich Low_complexity Low_complexity 1 42 0 2178 115 0 0 chr17 57726966 57727261 -31777292 - AluSg SINE Alu -14 296 2 17722 122 23 4 chr17 57727291 57729944 -31774609 + Charlie3 DNA MER1_type 2 2705 -5 23 33 0 0 chr17 57730344 57730374 -31774179 + AT_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 57730887 57730919 -31773634 + (ATG)n Simple_repeat Simple_repeat 3 34 0 218 342 180 0 chr17 57731359 57731470 -31773083 + L2 LINE L2 3142 3272 0 273 367 50 11 chr17 57732199 57732379 -31772174 + MIR SINE MIR 66 252 -10 235 230 161 0 chr17 57732977 57733064 -31771489 - MIR SINE MIR 0 262 162 298 314 39 39 chr17 57733847 57733949 -31770604 + MER5B DNA MER1_type 6 107 -71 25 0 0 0 chr17 57734517 57734542 -31770011 + AT_rich Low_complexity Low_complexity 1 25 0 328 236 93 57 chr17 57734924 57735064 -31769489 + MER5B DNA MER1_type 34 178 0 944 184 35 15 chr17 57735969 57736170 -31768383 - MER57A LTR ERV1 0 403 199 6859 204 40 2 chr17 57736170 57737508 -31767045 + MSTA-int LTR MaLR 264 1651 0 2731 126 21 5 chr17 57737508 57737928 -31766625 + MSTA LTR MaLR 1 427 -1 1195 211 3 7 chr17 57738548 57738833 -31765720 - L1 LINE L1 -821 5325 5042 3686 232 18 22 chr17 57738836 57739882 -31764671 + L1 LINE L1 2829 3870 -2276 8116 152 16 9 chr17 57740251 57741630 -31762923 - Tigger1 DNA MER2_type -378 2040 653 216 0 0 0 chr17 57741631 57741655 -31762898 + (TG)n Simple_repeat Simple_repeat 1 24 0 318 118 0 0 chr17 57741756 57741807 -31762746 + L1P5 LINE L1 5477 5527 -624 3615 142 11 71 chr17 57741843 57742319 -31762234 - L1MA2 LINE L1 0 6304 5886 180 0 0 0 chr17 57742319 57742339 -31762214 + (TTA)n Simple_repeat Simple_repeat 3 22 0 3615 142 11 71 chr17 57742339 57742596 -31761957 - L1MA2 LINE L1 -418 5886 5615 1962 97 3 35 chr17 57742598 57742939 -31761614 - LTR7 LTR ERV1 -2 448 119 318 26 0 0 chr17 57743431 57743470 -31761083 + (TTTAA)n Simple_repeat Simple_repeat 2 40 0 7772 17 0 3 chr17 57743470 57744849 -31759704 - L1PA3 LINE L1 -8 6147 4771 228 346 45 38 chr17 57744884 57745017 -31759536 - MIR3 SINE MIR -72 136 3 21 0 0 0 chr17 57745233 57745254 -31759299 + AT_rich Low_complexity Low_complexity 1 21 0 1503 174 42 86 chr17 57746529 57746915 -31757638 + MLT1B LTR MaLR 20 388 -2 1566 173 75 13 chr17 57746916 57747234 -31757319 - MER44D DNA MER2_type -1 608 1 281 339 0 0 chr17 57747401 57747466 -31757087 + L2 LINE L2 3225 3289 -24 1235 98 16 0 chr17 57748271 57748465 -31756088 + L1MA4A LINE L1 6095 6291 -12 2133 115 3 3 chr17 57749256 57749552 -31755001 + AluSg SINE Alu 1 296 -14 25 75 0 0 chr17 57749573 57749626 -31754927 + AT_rich Low_complexity Low_complexity 1 53 0 1510 183 31 57 chr17 57750108 57750425 -31754128 + AluJo SINE Alu 1 309 -3 190 318 94 0 chr17 57751492 57751577 -31752976 - MIR SINE MIR -63 145 53 2131 109 0 13 chr17 57752074 57752387 -31752166 + AluSc SINE Alu 1 309 0 207 0 0 0 chr17 57752660 57752683 -31751870 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1622 147 37 50 chr17 57758044 57758344 -31746209 + AluJb SINE Alu 1 296 -16 1557 195 45 23 chr17 57760880 57761234 -31743319 - THE1C LTR MaLR 0 375 14 2535 47 3 0 chr17 57761462 57761761 -31742792 - AluY SINE Alu -11 300 1 320 243 28 44 chr17 57762126 57762307 -31742246 + C-rich Low_complexity Low_complexity 2 179 0 * 341 225 8 39 chr17 57762181 57762394 -31742159 + (CACCC)n Simple_repeat Simple_repeat 1 206 0 384 22 0 0 chr17 57762633 57762678 -31741875 + (TG)n Simple_repeat Simple_repeat 2 46 0 3356 180 37 28 chr17 57762678 57763322 -31741231 - Tigger1 DNA MER2_type -1768 650 1 222 271 0 0 chr17 57764279 57764364 -31740189 + (TA)n Simple_repeat Simple_repeat 1 85 0 1761 212 24 9 chr17 57764467 57764891 -31739662 - L1MB5 LINE L1 -9 6165 5736 1780 271 10 6 chr17 57764906 57765527 -31739026 - L1M4 LINE L1 -2884 3760 3138 2941 274 54 54 chr17 57765572 57767153 -31737400 - L1M4 LINE L1 -4957 1585 5 657 267 17 0 chr17 57767167 57767339 -31737214 + MER58A DNA MER1_type 48 222 -2 204 184 0 0 chr17 57768095 57768144 -31736409 + GA-rich Low_complexity Low_complexity 2 50 0 266 259 24 0 chr17 57768494 57768579 -31735974 - L1MA9 LINE L1 -38 6274 6188 25 0 0 0 chr17 57768810 57768835 -31735718 + AT_rich Low_complexity Low_complexity 1 25 0 905 233 0 0 chr17 57769179 57769372 -31735181 - MER58B DNA MER1_type -32 309 117 24 0 0 0 chr17 57770033 57770057 -31734496 + AT_rich Low_complexity Low_complexity 1 24 0 5002 138 2 4 chr17 57770092 57770891 -31733662 - L1PA14 LINE L1 0 6161 5364 447 284 0 0 chr17 57770892 57770994 -31733559 - MER58B DNA MER1_type -239 102 1 659 193 8 0 chr17 57771346 57771465 -31733088 + FLAM_C SINE Alu 2 121 -12 252 0 0 0 chr17 57771465 57771493 -31733060 + (CA)n Simple_repeat Simple_repeat 2 29 0 193 103 0 0 chr17 57771666 57771695 -31732858 - MIR SINE MIR -13 249 221 944 113 17 11 chr17 57771759 57771936 -31732617 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 464 211 30 60 chr17 57772073 57772206 -31732347 - L1MB3 LINE L1 -164 6019 5891 2056 87 0 4 chr17 57773174 57773439 -31731114 + AluSx SINE Alu 35 298 -14 189 0 0 0 chr17 57773575 57773596 -31730957 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 180 349 0 0 chr17 57774319 57774382 -31730171 - MIR3 SINE MIR -13 195 133 283 269 58 39 chr17 57774867 57774971 -31729582 - MIR3 SINE MIR -19 189 84 932 219 0 0 chr17 57775552 57775744 -31728809 - AluJb SINE Alu 0 312 121 764 178 22 0 chr17 57775759 57775894 -31728659 - FLAM_C SINE Alu 0 143 6 294 106 0 0 chr17 57776476 57776523 -31728030 + (CA)n Simple_repeat Simple_repeat 1 47 0 21 57 0 0 chr17 57777840 57777875 -31726678 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr17 57778149 57778187 -31726366 + AT_rich Low_complexity Low_complexity 1 38 0 549 288 79 48 chr17 57778725 57779064 -31725489 + L1MEd LINE L1 805 1157 -4962 2041 139 10 0 chr17 57779064 57779365 -31725188 + AluSg1 SINE Alu 2 305 -4 549 288 79 48 chr17 57779365 57779379 -31725174 + L1MEd LINE L1 1157 1169 -4950 21 57 0 0 chr17 57779465 57779500 -31725053 + AT_rich Low_complexity Low_complexity 1 35 0 399 267 75 53 chr17 57779928 57780209 -31724344 + L1MEd LINE L1 3100 3386 -2743 275 302 77 24 chr17 57780358 57780527 -31724026 + L1PA15 LINE L1 3591 3768 -2378 780 192 20 0 chr17 57780532 57780683 -31723870 + MLT1D LTR MaLR 6 159 -346 357 93 0 0 chr17 57780831 57780885 -31723668 + (CA)n Simple_repeat Simple_repeat 1 54 0 198 103 0 0 chr17 57781243 57781272 -31723281 + (TG)n Simple_repeat Simple_repeat 1 29 0 301 169 0 65 chr17 57781272 57781349 -31723204 + L1MCa LINE L1 1996 2067 -4359 2388 104 49 13 chr17 57781359 57781745 -31722808 - MLT2A1 LTR ERVL -44 400 1 183 100 0 0 chr17 57781778 57781808 -31722745 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 6583 202 29 20 chr17 57781850 57781916 -31722637 + L1PA15 LINE L1 3817 3881 -2265 243 0 0 0 chr17 57781916 57781943 -31722610 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6583 202 29 20 chr17 57781943 57782276 -31722277 + L1PA15 LINE L1 3881 4210 -1936 2039 88 48 0 chr17 57782276 57782549 -31722004 - AluY SINE Alu -13 298 13 6583 202 29 20 chr17 57782549 57783024 -31721529 + L1PA15 LINE L1 4210 4679 -1467 206 22 44 44 chr17 57783024 57783069 -31721484 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 6583 202 29 20 chr17 57783069 57783720 -31720833 + L1PA15 LINE L1 4679 5357 -789 3215 156 40 6 chr17 57783826 57784564 -31719989 + L1PA15 LINE L1 5361 6156 0 251 229 57 14 chr17 57784686 57784756 -31719797 + L1ME3A LINE L1 6070 6142 -28 306 0 0 0 chr17 57784960 57784994 -31719559 + (CA)n Simple_repeat Simple_repeat 1 34 0 901 150 0 0 chr17 57785482 57785615 -31718938 + FLAM_C SINE Alu 1 133 0 285 109 0 0 chr17 57786997 57787043 -31717510 + (CA)n Simple_repeat Simple_repeat 1 46 0 213 154 0 0 chr17 57787369 57787408 -31717145 + (TG)n Simple_repeat Simple_repeat 1 39 0 227 222 0 0 chr17 57787408 57787462 -31717091 + L1MC4 LINE L1 6653 6706 -1336 * 2138 223 35 9 chr17 57787423 57787966 -31716587 - L1MC3 LINE L1 -1139 6646 6090 274 277 136 45 chr17 57791332 57791509 -31713044 + MIR SINE MIR 14 206 -56 22 35 0 0 chr17 57791523 57791552 -31713001 + AT_rich Low_complexity Low_complexity 1 29 0 463 219 88 36 chr17 57791739 57791876 -31712677 - MIR SINE MIR 0 262 119 200 338 14 40 chr17 57792069 57792143 -31712410 - L2 LINE L2 -8 3264 3193 207 301 14 0 chr17 57793595 57793668 -31710885 - MIR SINE MIR -33 229 156 2422 100 25 6 chr17 57793788 57794149 -31710404 - L1PB1 LINE L1 -2 6149 5782 231 117 17 33 chr17 57794149 57794209 -31710344 + (TA)n Simple_repeat Simple_repeat 2 60 0 1931 114 5 3 chr17 57794213 57794514 -31710039 - L1ME LINE L1 -297 5824 5521 2810 180 82 3 chr17 57794515 57795385 -31709168 + L1ME LINE L1 4549 5502 -649 223 63 16 63 chr17 57795485 57795548 -31709005 + (GGGTG)n Simple_repeat Simple_repeat 3 62 0 2075 153 9 24 chr17 57795620 57796072 -31708481 - LTR7 LTR ERV1 -5 445 1 1631 117 56 8 chr17 57796080 57796346 -31708207 - L1M1 LINE L1 -691 5611 5333 1712 144 4 23 chr17 57796357 57796620 -31707933 - AluSx SINE Alu -12 300 43 407 241 0 12 chr17 57796643 57796726 -31707827 - AluS SINE Alu -218 94 13 868 191 20 10 chr17 57796738 57796942 -31707611 - L1 LINE L1 -814 5332 5127 2141 142 8 40 chr17 57796948 57797322 -31707231 + THE1C LTR MaLR 14 375 0 8385 138 78 27 chr17 57797322 57798825 -31705728 + THE1C-int LTR MaLR 1 1580 0 2131 154 8 46 chr17 57798825 57799215 -31705338 + THE1C LTR MaLR 1 375 0 5929 175 15 15 chr17 57799215 57800399 -31704154 - L1 LINE L1 -903 5243 4060 1603 208 3 0 chr17 57800429 57800723 -31703830 + AluJo SINE Alu 1 295 -17 244 319 153 12 chr17 57801125 57801366 -31703187 - L2 LINE L2 -1216 2098 1824 201 39 0 0 chr17 57801403 57801429 -31703124 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1716 177 0 10 chr17 57801812 57802106 -31702447 + AluJb SINE Alu 1 291 -21 363 265 51 43 chr17 57803137 57803254 -31701299 - MIR3 SINE MIR -8 200 83 203 276 0 92 chr17 57803391 57803478 -31701075 + L2 LINE L2 3194 3272 0 24 0 0 0 chr17 57803646 57803670 -31700883 + AT_rich Low_complexity Low_complexity 1 24 0 2733 19 0 7 chr17 57804426 57804735 -31699818 - AluY SINE Alu -4 307 1 235 313 0 0 chr17 57805272 57805336 -31699217 + (TATG)n Simple_repeat Simple_repeat 3 66 0 320 261 33 112 chr17 57805483 57805724 -31698829 - L2 LINE L2 -19 3294 3073 1279 114 11 5 chr17 57805890 57806074 -31698479 - AluY SINE Alu -121 190 6 259 43 0 43 chr17 57806160 57806207 -31698346 + (TA)n Simple_repeat Simple_repeat 2 46 0 204 214 0 0 chr17 57807022 57807064 -31697489 + L2 LINE L2 3263 3304 -9 593 105 23 0 chr17 57807220 57807306 -31697247 + AluY SINE Alu 217 304 -7 855 256 24 24 chr17 57807385 57807635 -31696918 + MLT1C LTR MaLR 218 467 0 1841 103 110 0 chr17 57809062 57809335 -31695218 + AluSg SINE Alu 1 303 -7 21 36 0 0 chr17 57809384 57809412 -31695141 + AT_rich Low_complexity Low_complexity 1 28 0 1176 228 112 13 chr17 57809954 57810392 -31694161 + MLT1D LTR MaLR 7 467 0 28 79 0 0 chr17 57810651 57810714 -31693839 + AT_rich Low_complexity Low_complexity 1 63 0 227 361 105 42 chr17 57810740 57811122 -31693431 + L2 LINE L2 2560 2965 -349 673 287 14 29 chr17 57811186 57811395 -31693158 - MIR SINE MIR -55 207 2 219 233 0 0 chr17 57812546 57812589 -31691964 + (TG)n Simple_repeat Simple_repeat 2 44 0 228 261 108 72 chr17 57812670 57812781 -31691772 + LTR33A LTR ERVL 76 190 -333 582 251 62 20 chr17 57812849 57813044 -31691509 + LTR33 LTR ERVL 309 511 -10 413 318 49 29 chr17 57813165 57813410 -31691143 - L1ME LINE L1 -334 5787 5538 1455 175 140 9 chr17 57813410 57813725 -31690828 - MLT1A1 LTR MaLR 0 365 10 411 250 58 18 chr17 57813737 57813950 -31690603 - L1ME LINE L1 -625 5545 5322 2077 146 3 0 chr17 57814675 57814983 -31689570 + AluSx SINE Alu 1 309 -3 385 254 97 9 chr17 57815613 57815727 -31688826 - MER5C DNA MER1_type -200 124 1 1725 148 35 7 chr17 57815750 57815911 -31688642 - AluSx SINE Alu -20 292 118 315 0 0 0 chr17 57815911 57815946 -31688607 + (TG)n Simple_repeat Simple_repeat 2 36 0 1725 148 35 7 chr17 57815946 57816068 -31688485 - AluSx SINE Alu -194 118 1 2096 101 0 7 chr17 57816976 57817254 -31687299 + AluSg1 SINE Alu 2 277 -32 240 35 0 0 chr17 57817254 57817283 -31687270 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 1757 219 51 20 chr17 57817722 57818174 -31686379 - MLT1C LTR MaLR -1 466 1 1248 288 59 16 chr17 57819363 57819559 -31684994 + MSTD LTR MaLR 1 187 -209 189 0 0 0 chr17 57819559 57819580 -31684973 + (TC)n Simple_repeat Simple_repeat 1 21 0 1248 288 59 16 chr17 57819580 57819758 -31684795 + MSTD LTR MaLR 187 391 -5 702 345 126 2 chr17 57819785 57820199 -31684354 - LTR33 LTR ERVL -21 500 36 958 346 167 34 chr17 57821131 57822189 -31682364 + L2 LINE L2 87 1285 -2029 1836 190 43 64 chr17 57822194 57822513 -31682040 - L1MA6 LINE L1 -228 6072 5765 1988 118 70 20 chr17 57822513 57822870 -31681683 + THE1C LTR MaLR 1 375 0 1836 190 43 64 chr17 57822870 57823018 -31681535 - L1MA6 LINE L1 -535 5765 5615 306 53 0 0 chr17 57822987 57823025 -31681528 + L1M2 LINE L1 5620 5657 -643 * 2145 119 3 0 chr17 57823031 57823334 -31681219 - AluY SINE Alu -7 304 1 449 339 11 16 chr17 57823338 57823527 -31681026 + L2 LINE L2 2091 2278 -1036 25 0 0 0 chr17 57823884 57823909 -31680644 + AT_rich Low_complexity Low_complexity 1 25 0 479 263 22 29 chr17 57827939 57828076 -31676477 + MIR SINE MIR 18 153 -109 284 120 20 0 chr17 57829873 57829923 -31674630 + CT-rich Low_complexity Low_complexity 2 52 0 21 57 0 0 chr17 57830813 57830848 -31673705 + AT_rich Low_complexity Low_complexity 1 35 0 1935 152 134 11 chr17 57832097 57832478 -31672075 - MSTA LTR MaLR 0 428 1 8364 182 18 20 chr17 57832478 57834132 -31670421 - MSTA-int LTR MaLR 0 1651 1 1526 139 207 25 chr17 57834132 57834455 -31670098 - MSTA LTR MaLR 0 428 47 656 144 54 0 chr17 57834455 57834566 -31669987 + L1MA5A LINE L1 5981 6097 -200 277 228 0 0 chr17 57834566 57834623 -31669930 - MSTA LTR MaLR -370 58 2 183 296 161 12 chr17 57834882 57834963 -31669590 - L2 LINE L2 -74 3198 3106 1032 202 12 8 chr17 57835105 57835357 -31669196 - L1MA4 LINE L1 -5 6295 6043 654 203 13 7 chr17 57835362 57835515 -31669038 + L1MA5A LINE L1 5153 5306 -840 212 683 0 0 chr17 57835515 57835679 -31668874 + A-rich Low_complexity Low_complexity 1 164 0 4384 154 59 11 chr17 57835682 57836508 -31668045 + L1MA5A LINE L1 5297 6162 -135 190 0 67 0 chr17 57836508 57836538 -31668015 + (TA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr17 57836620 57836643 -31667910 + AT_rich Low_complexity Low_complexity 1 23 0 190 288 34 0 chr17 57836666 57836725 -31667828 + MIR SINE MIR 47 107 -155 295 184 53 13 chr17 57836761 57836837 -31667716 - L1MB2 LINE L1 -54 6117 6039 200 360 63 32 chr17 57837048 57837237 -31667316 - L2 LINE L2 -216 3056 2862 2363 97 0 0 chr17 57837393 57837704 -31666849 - AluY SINE Alu 0 311 1 383 283 243 11 chr17 57838043 57838292 -31666261 + MLT1H1 LTR MaLR 1 289 -260 227 149 0 21 chr17 57838325 57838372 -31666181 + (GAAA)n Simple_repeat Simple_repeat 4 49 0 376 292 0 78 chr17 57838478 57838563 -31665990 + MLT1H1 LTR MaLR 449 518 -77 1838 164 0 30 chr17 57838563 57838867 -31665686 + AluSx SINE Alu 2 296 -16 376 292 0 78 chr17 57838867 57838935 -31665618 + MLT1H1 LTR MaLR 518 590 -5 29 0 0 0 chr17 57839554 57839583 -31664970 + AT_rich Low_complexity Low_complexity 1 29 0 264 244 130 17 chr17 57840386 57840501 -31664052 + MIR3 SINE MIR 67 194 -14 500 322 167 33 chr17 57840575 57841071 -31663482 - L2 LINE L2 -9 3304 2751 265 377 38 0 chr17 57842325 57842431 -31662122 + MIR3 SINE MIR 85 194 -14 3688 212 21 11 chr17 57842953 57843965 -31660588 + L1P LINE L1 4405 5429 -737 2687 248 70 52 chr17 57844310 57844962 -31659591 + L1M4b LINE L1 11 650 -6488 184 0 0 88 chr17 57844962 57844996 -31659557 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2687 248 70 52 chr17 57844996 57845916 -31658637 + L1M4b LINE L1 650 1552 -5586 501 103 26 0 chr17 57845916 57845994 -31658559 + MADE1 DNA Mariner 1 80 0 2687 248 70 52 chr17 57845994 57846701 -31657852 + L1M4b LINE L1 1552 2517 -4621 1707 206 32 64 chr17 57846952 57847292 -31657261 + MSTB LTR MaLR 1 350 -76 2141 122 0 0 chr17 57847292 57847586 -31656967 + AluSx SINE Alu 1 294 -18 1707 206 32 64 chr17 57847586 57847610 -31656943 + MSTB LTR MaLR 350 373 -53 1888 165 0 0 chr17 57847610 57847889 -31656664 + AluSx SINE Alu 3 281 -31 198 0 0 0 chr17 57847894 57847916 -31656637 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1707 206 32 64 chr17 57847916 57847982 -31656571 + MSTB LTR MaLR 377 424 -2 2037 205 88 15 chr17 57848213 57848872 -31655681 + L1MB8 LINE L1 5156 5861 -317 496 340 53 5 chr17 57848948 57849154 -31655399 - MIR SINE MIR -10 252 37 2304 74 0 32 chr17 57849213 57849523 -31655030 + AluY SINE Alu 1 300 -11 21 57 0 0 chr17 57849506 57849541 -31655012 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 57850280 57850309 -31654244 + AT_rich Low_complexity Low_complexity 1 29 0 347 156 28 106 chr17 57850704 57850805 -31653748 + L1M2 LINE L1 5468 5545 -697 2508 58 0 0 chr17 57850805 57851113 -31653440 + AluY SINE Alu 1 308 -3 347 156 28 106 chr17 57851113 57851141 -31653412 + L1M2 LINE L1 5545 5574 -668 26 0 0 0 chr17 57852097 57852123 -31652430 + AT_rich Low_complexity Low_complexity 1 26 0 395 198 11 44 chr17 57852371 57852462 -31652091 + MER21B LTR ERV1 1 88 -775 3381 213 46 19 chr17 57852466 57853184 -31651369 + MER21B LTR ERV1 43 779 -84 1579 161 13 36 chr17 57853586 57853891 -31650662 + AluJb SINE Alu 1 298 -14 646 320 68 52 chr17 57854470 57854737 -31649816 - L2 LINE L2 -1 3312 3036 2006 105 14 0 chr17 57854737 57855022 -31649531 + AluSp SINE Alu 25 313 0 646 320 68 52 chr17 57855022 57855123 -31649430 - L2 LINE L2 -277 3036 2938 228 321 116 9 chr17 57855123 57855235 -31649318 + L2 LINE L2 3140 3263 -9 329 296 62 0 chr17 57855458 57855539 -31649014 + L2 LINE L2 3187 3272 0 697 359 93 38 chr17 57855809 57856092 -31648461 + L2 LINE L2 1616 1882 -1432 7532 22 0 0 chr17 57856092 57857127 -31647426 - L1PA3 LINE L1 0 6155 5106 697 359 93 38 chr17 57857127 57857668 -31646885 + L2 LINE L2 1882 2486 -828 5843 171 16 4 chr17 57857703 57858761 -31645792 - L1MC1 LINE L1 -9 6324 5254 215 372 155 22 chr17 57858814 57859131 -31645422 + L2 LINE L2 2585 2943 -371 232 313 98 31 chr17 57859456 57859619 -31644934 + MLT1H1 LTR MaLR 341 514 -41 219 108 47 68 chr17 57859767 57859915 -31644638 + (TATAA)n Simple_repeat Simple_repeat 4 148 0 234 217 16 69 chr17 57859935 57860124 -31644429 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 583 298 12 12 chr17 57860129 57860300 -31644253 - MIR SINE MIR 0 262 92 1569 241 49 29 chr17 57860533 57860986 -31643567 + MER74B LTR ERVL 75 536 -86 788 242 79 9 chr17 57860857 57861084 -31643469 - MER88 LTR ERVL -220 244 2 * 246 167 24 0 chr17 57861393 57861435 -31643118 + MER70B LTR ERVL 455 497 -81 2102 78 10 20 chr17 57861592 57861888 -31642665 - AluY SINE Alu -18 293 1 289 357 101 21 chr17 57861935 57862221 -31642332 + L1MEd LINE L1 195 503 -5616 2097 161 50 41 chr17 57862253 57862713 -31641840 - L1MA2 LINE L1 -12 6292 5829 5580 176 38 5 chr17 57862829 57863961 -31640592 + L1 LINE L1 3871 5039 -1107 758 284 110 22 chr17 57864323 57864998 -31639555 + L1MEd LINE L1 904 1677 -866 21 0 0 0 chr17 57865057 57865078 -31639475 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 57865328 57865357 -31639196 + AT_rich Low_complexity Low_complexity 1 29 0 399 329 13 13 chr17 57865765 57865917 -31638636 + L2 LINE L2 3143 3294 -19 858 335 63 19 chr17 57866924 57867336 -31637217 + MLT1K LTR MaLR 7 436 -152 583 337 93 4 chr17 57867339 57867618 -31636935 + L2 LINE L2 2851 3154 -159 867 171 119 52 chr17 57867623 57867833 -31636720 - AluJo SINE Alu -11 301 78 360 276 104 8 chr17 57867833 57867967 -31636586 + L2 LINE L2 3167 3313 0 22 56 0 0 chr17 57868095 57868131 -31636422 + AT_rich Low_complexity Low_complexity 1 36 0 1362 126 14 0 chr17 57868413 57868620 -31635933 + MER2 DNA MER2_type 1 210 -135 24 77 0 0 chr17 57868629 57868681 -31635872 + AT_rich Low_complexity Low_complexity 1 52 0 251 213 43 0 chr17 57868695 57868742 -31635811 + MER2 DNA MER2_type 296 344 -1 1133 222 3 56 chr17 57868959 57868995 -31635558 - L1P LINE L1 -1159 4987 4951 2383 66 3 3 chr17 57868995 57869298 -31635255 - AluY SINE Alu -8 303 1 1133 222 3 56 chr17 57869298 57869585 -31634968 - L1P LINE L1 -1195 4951 4681 2283 158 15 12 chr17 57869685 57870091 -31634462 - Tigger1 DNA MER2_type -1 2417 2011 226 277 284 7 chr17 57870616 57870757 -31633796 - MER5A DNA MER1_type -6 183 4 28 29 0 0 chr17 57872348 57872383 -31632170 + AT_rich Low_complexity Low_complexity 1 35 0 394 278 19 8 chr17 57872428 57872556 -31631997 - L1PA16 LINE L1 -7 6157 6032 2891 199 49 26 chr17 57872671 57872951 -31631602 - MER67C LTR ERV1 -8 702 430 2020 190 23 43 chr17 57872951 57873388 -31631165 + MSTB1 LTR MaLR 1 428 -4 2891 199 49 26 chr17 57873388 57873757 -31630796 - MER67C LTR ERV1 -280 430 38 1594 210 68 26 chr17 57873757 57874181 -31630372 + LTR47B LTR ERVL 1 442 -1 556 89 13 0 chr17 57874250 57874329 -31630224 + MADE1 DNA Mariner 1 80 0 495 0 0 0 chr17 57875040 57875095 -31629458 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1496 196 0 14 chr17 57875097 57875383 -31629170 - AluJb SINE Alu -30 282 1 221 102 68 0 chr17 57876045 57876104 -31628449 + (TA)n Simple_repeat Simple_repeat 2 64 0 33 32 0 32 chr17 57876169 57876209 -31628344 + AT_rich Low_complexity Low_complexity 1 40 -20 2264 63 3 10 chr17 57876209 57876512 -31628041 - AluY SINE Alu -10 301 1 33 32 0 32 chr17 57876512 57876533 -31628020 + AT_rich Low_complexity Low_complexity 40 60 0 204 117 33 17 chr17 57876559 57876619 -31627934 + (TATAA)n Simple_repeat Simple_repeat 5 65 0 246 223 54 8 chr17 57876620 57876750 -31627803 + (TA)n Simple_repeat Simple_repeat 2 137 0 213 65 0 0 chr17 57876750 57876781 -31627772 + (CA)n Simple_repeat Simple_repeat 2 32 0 512 290 42 47 chr17 57876916 57877299 -31627254 - L1MEc LINE L1 -3493 3047 2667 230 276 145 42 chr17 57877367 57877650 -31626903 - L1MEc LINE L1 -4062 2659 2348 357 238 119 73 chr17 57877850 57878042 -31626511 - L1MEc LINE L1 -4505 2035 1853 1810 197 10 25 chr17 57878042 57878438 -31626115 + MLT1B LTR MaLR 1 390 0 357 238 119 73 chr17 57878438 57878750 -31625803 - L1MEc LINE L1 -4687 1853 1508 2396 139 14 19 chr17 57878807 57879239 -31625314 - L1MA6 LINE L1 0 6300 5871 2546 187 30 20 chr17 57879239 57879342 -31625211 - L1MA6 LINE L1 -706 5585 5485 2135 113 3 7 chr17 57879342 57879642 -31624911 - AluSx SINE Alu -13 299 1 2546 187 30 20 chr17 57879642 57880336 -31624217 - L1MA6 LINE L1 -806 5485 4782 322 106 0 0 chr17 57880797 57880844 -31623709 - Alu SINE Alu -256 47 1 23 54 0 0 chr17 57881887 57881924 -31622629 + AT_rich Low_complexity Low_complexity 1 37 0 358 287 26 72 chr17 57882474 57882669 -31621884 - L2 LINE L2 0 3313 3128 275 247 0 0 chr17 57882747 57882836 -31621717 - L1M4 LINE L1 -770 5376 5288 444 100 50 0 chr17 57883463 57883543 -31621010 + L1MA1 LINE L1 6219 6302 0 301 294 185 0 chr17 57883614 57883733 -31620820 + MIR SINE MIR 111 251 -11 2328 65 7 0 chr17 57883779 57884073 -31620480 - AluY SINE Alu -13 298 3 299 314 39 52 chr17 57884627 57884780 -31619773 + MIR SINE MIR 83 233 -29 3200 209 42 41 chr17 57884848 57885543 -31619010 - L1MA9 LINE L1 -4 6308 5615 234 0 0 0 chr17 57885543 57885569 -31618984 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 538 130 0 0 chr17 57885569 57885646 -31618907 - AluSc SINE Alu -30 279 203 3200 209 42 41 chr17 57885646 57886073 -31618480 - L1MA9 LINE L1 -696 5616 5175 28 0 0 0 chr17 57886784 57886812 -31617741 + AT_rich Low_complexity Low_complexity 1 28 0 2395 46 7 10 chr17 57887041 57887347 -31617206 + AluY SINE Alu 1 305 -6 4847 187 25 19 chr17 57937378 57938288 -31566265 - HUERS-P3b LTR ERV1 -5456 1962 1047 709 234 11 17 chr17 57938318 57938493 -31566060 + L1M2 LINE L1 5618 5791 -500 1990 174 36 42 chr17 57938627 57938946 -31565607 - MLT1C-int LTR MaLR -926 445 128 2216 114 3 0 chr17 57938946 57939254 -31565299 - AluSg SINE Alu -1 309 1 1990 174 36 42 chr17 57939254 57939382 -31565171 - MLT1C-int LTR MaLR -1243 128 1 1072 261 73 9 chr17 57939405 57939734 -31564819 - MLT1C LTR MaLR -36 431 82 4633 208 34 11 chr17 57939841 57940396 -31564157 - L1MA9 LINE L1 -1112 5034 4493 215 30 0 30 chr17 57940396 57940429 -31564124 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4633 208 34 11 chr17 57940429 57941028 -31563525 - L1MA9 LINE L1 -1653 4493 3854 430 198 0 12 chr17 57941128 57941214 -31563339 - MLT1C LTR MaLR -382 85 1 698 277 137 33 chr17 57941215 57941608 -31562945 + L2 LINE L2 2864 3297 -16 2181 220 21 37 chr17 57943611 57944179 -31560374 - MER82 DNA MER2_type -91 562 4 1354 314 138 11 chr17 57944183 57944746 -31559807 - Zaphod DNA AcHobo -3377 654 20 183 289 289 0 chr17 57945258 57945341 -31559212 + L2 LINE L2 3156 3262 -10 235 293 95 9 chr17 57945562 57945678 -31558875 + L1ME LINE L1 5556 5681 -440 194 261 93 112 chr17 57947969 57948130 -31556423 + L2 LINE L2 2940 3097 -216 182 269 19 39 chr17 57948269 57948321 -31556232 + L2 LINE L2 3203 3253 -60 3275 222 40 55 chr17 57948995 57950088 -31554465 + L1MA6 LINE L1 3079 4175 -3390 2767 16 0 0 chr17 57950088 57950395 -31554158 - AluYa5 SINE Alu -4 307 1 3275 222 40 55 chr17 57950395 57950698 -31553855 + L1MA6 LINE L1 4175 4481 -3084 * 5459 196 60 5 chr17 57950675 57950964 -31553589 + L1MA6 LINE L1 5487 5759 -1820 195 42 0 0 chr17 57950964 57950988 -31553565 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 5459 196 60 5 chr17 57950988 57951959 -31552594 + L1MA6 LINE L1 5759 6817 -762 1533 183 71 3 chr17 57952062 57952385 -31552168 + L1MA6 LINE L1 7048 7392 -327 1711 114 11 0 chr17 57952394 57952656 -31551897 + L1MA6 LINE L1 7455 7719 0 499 303 122 14 chr17 57953092 57953313 -31551240 - HAL1 LINE L1 -2202 305 61 247 229 55 64 chr17 57954906 57955015 -31549538 - LTR67 LTR ERVL -8 549 442 392 314 0 0 chr17 57955504 57955609 -31548944 + L2 LINE L2 2466 2570 -744 226 118 0 0 chr17 57955611 57955645 -31548908 - MLT1B LTR MaLR -32 358 325 9017 226 15 13 chr17 57956615 57958851 -31545702 - L1P LINE L1 -1278 4868 2630 2498 126 14 0 chr17 57959034 57959457 -31545096 + L1P4 LINE L1 5210 5637 -528 279 271 0 0 chr17 57959491 57959576 -31544977 + L1M3c LINE L1 1352 1436 -4705 2139 142 0 3 chr17 57959708 57960019 -31544534 - AluSx SINE Alu -2 310 1 401 296 51 44 chr17 57960019 57960368 -31544185 - L1M3a LINE L1 -4831 1822 1470 239 343 17 83 chr17 57960503 57960684 -31543869 - L1M3a LINE L1 -5252 1401 1233 6592 116 84 29 chr17 57960700 57961911 -31542642 - MER52C LTR ERV1 0 1278 1 2203 106 0 0 chr17 57962056 57962367 -31542186 - AluY SINE Alu 0 311 1 233 278 14 0 chr17 57962372 57962444 -31542109 - L1M3a LINE L1 -5814 839 767 232 363 38 0 chr17 57962970 57963050 -31541503 + L2 LINE L2 3231 3313 0 33 0 0 0 chr17 57964236 57964269 -31540284 + AT_rich Low_complexity Low_complexity 1 33 0 2236 105 0 10 chr17 57964383 57964696 -31539857 - AluSx SINE Alu 0 312 3 244 296 42 0 chr17 57964807 57964878 -31539675 + MIR SINE MIR 141 214 -48 1145 231 13 0 chr17 57966552 57966790 -31537763 + MLT1A1 LTR MaLR 125 365 0 272 318 50 64 chr17 57967026 57967246 -31537307 + L2 LINE L2 2196 2412 -902 1943 276 72 40 chr17 57967519 57968218 -31536335 + MER21B LTR ERV1 19 739 -124 1575 195 0 4 chr17 57969886 57970184 -31534369 + AluJb SINE Alu 13 309 0 381 364 56 15 chr17 57972200 57972395 -31532158 + MIR SINE MIR 14 216 -46 22 0 0 0 chr17 57972710 57972732 -31531821 + AT_rich Low_complexity Low_complexity 1 22 0 251 250 0 16 chr17 57974052 57974116 -31530437 + CT-rich Low_complexity Low_complexity 2 64 0 21 0 0 0 chr17 57974297 57974318 -31530235 + AT_rich Low_complexity Low_complexity 1 21 0 759 196 81 6 chr17 57974739 57974912 -31529641 + MLT1E1 LTR MaLR 469 654 0 32 43 0 0 chr17 57974960 57975006 -31529547 + AT_rich Low_complexity Low_complexity 1 46 0 346 291 126 31 chr17 57975025 57975382 -31529171 + L1ME LINE L1 4457 4847 -1299 968 308 87 19 chr17 57975656 57976373 -31528180 - L2 LINE L2 -2 3311 2546 793 264 100 28 chr17 57976420 57976863 -31527690 + L1ME LINE L1 5255 5729 -433 270 276 32 32 chr17 57976968 57977091 -31527462 + L1ME LINE L1 5587 5709 -461 619 120 0 0 chr17 57977207 57977299 -31527254 + AluY SINE Alu 41 132 -179 180 0 0 0 chr17 57977299 57977319 -31527234 + (A)n Simple_repeat Simple_repeat 1 20 0 2109 94 63 0 chr17 57977321 57977607 -31526946 + AluY SINE Alu 1 304 -7 24 0 0 0 chr17 57977630 57977654 -31526899 + AT_rich Low_complexity Low_complexity 1 24 0 254 146 0 18 chr17 57977738 57977793 -31526760 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2254 126 0 0 chr17 57979377 57979687 -31524866 + AluSg SINE Alu 1 310 0 461 186 105 32 chr17 57980153 57980277 -31524276 + L1PA15-16 LINE L1 2488 2620 -4229 239 278 10 62 chr17 57980444 57980541 -31524012 + L1MD3 LINE L1 7185 7276 -719 434 256 26 9 chr17 57980544 57980680 -31523873 + MLT1F1 LTR MaLR 7 145 -443 1980 249 25 18 chr17 57980680 57981242 -31523311 + L1MD3 LINE L1 7423 7988 -7 194 238 24 0 chr17 57981361 57981403 -31523150 + MIR SINE MIR 12 54 -208 2284 67 7 7 chr17 57981536 57981833 -31522720 - AluY SINE Alu -14 297 1 25 0 0 0 chr17 57982699 57982724 -31521829 + AT_rich Low_complexity Low_complexity 1 25 0 211 285 125 21 chr17 57982988 57983132 -31521421 - MIR SINE MIR -2 260 102 316 295 12 126 chr17 57983389 57983643 -31520910 + MLT1J LTR MaLR 131 355 -156 5581 125 10 11 chr17 57984063 57984779 -31519774 - L1PA15 LINE L1 -6 6159 5443 1927 155 131 8 chr17 57984779 57985160 -31519393 - MSTA LTR MaLR 0 428 1 5581 125 10 11 chr17 57985160 57985313 -31519240 - L1PA15 LINE L1 -722 5443 5291 6455 183 18 42 chr17 57985413 57986902 -31517651 - L1P LINE L1 -766 5380 3928 2251 160 37 30 chr17 57987435 57987836 -31516717 - LTR57 LTR ERVL -7 404 1 5362 184 17 16 chr17 57987836 57988742 -31515811 - LTR57-int LTR ERVL 0 5343 4434 2122 138 0 0 chr17 57988742 57989046 -31515507 + AluSq SINE Alu 1 304 -9 5362 184 17 16 chr17 57989046 57989098 -31515455 - LTR57-int LTR ERVL -909 4434 4384 1213 177 0 0 chr17 57989094 57989286 -31515267 - LTR57-int LTR ERVL -3163 2180 1989 * 2154 136 6 6 chr17 57989287 57989648 -31514905 - LTR57-int LTR ERVL -3712 1631 1271 350 282 123 79 chr17 57989857 57990197 -31514356 - HAL1 LINE L1 -837 1670 1316 242 342 63 13 chr17 57991704 57991862 -31512691 + MIR SINE MIR 84 249 -13 214 297 99 33 chr17 57993594 57993685 -31510868 - L2 LINE L2 -27 3286 3190 441 286 69 23 chr17 57996033 57996208 -31508345 + MIR SINE MIR 28 210 -52 223 369 24 0 chr17 57996513 57996597 -31507956 - L2 LINE L2 -1 3271 3186 329 256 207 25 chr17 57996781 57997023 -31507530 - L2 LINE L2 -5 3308 3023 1967 109 14 7 chr17 57997286 57997586 -31506967 - AluSq SINE Alu 0 302 1 229 222 0 32 chr17 57997620 57997683 -31506870 + MIR SINE MIR 93 153 -109 467 267 100 80 chr17 57998628 57998879 -31505674 - MIR SINE MIR 0 262 7 2069 133 3 7 chr17 57999110 57999419 -31505134 + AluSp SINE Alu 3 310 -3 437 320 28 0 chr17 57999655 57999836 -31504717 + L1MC/D LINE L1 5584 5769 -2039 387 0 0 0 chr17 58000676 58000719 -31503834 + (TG)n Simple_repeat Simple_repeat 2 44 0 694 231 60 19 chr17 58000793 58001009 -31503544 - L1MD3 LINE L1 0 7995 7771 25 51 0 0 chr17 58001192 58001231 -31503322 + AT_rich Low_complexity Low_complexity 1 39 0 374 327 90 24 chr17 58001318 58001529 -31503024 - MIR SINE MIR -32 230 6 6897 64 28 0 chr17 58002893 58003766 -31500787 + MER11D LTR ERVK 1 897 0 646 266 71 36 chr17 58003923 58004231 -31500322 - LTR16A1 LTR ERVL 0 457 139 984 160 28 75 chr17 58004867 58005080 -31499473 + Tigger2a DNA MER2_type 1 203 -231 207 0 0 0 chr17 58005080 58005103 -31499450 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1247 94 0 64 chr17 58005103 58005306 -31499247 - L1PA8 LINE L1 -17 6155 5966 6128 83 9 14 chr17 58005410 58006960 -31497593 - L1PA8 LINE L1 -177 5995 4463 367 164 0 0 chr17 58006961 58007022 -31497531 - L1P3 LINE L1 -6395 66 6 1332 182 4 0 chr17 58007034 58007270 -31497283 + Tigger2a DNA MER2_type 208 444 0 762 281 88 11 chr17 58007435 58007788 -31496765 + L1ME4a LINE L1 5521 5900 -221 2664 224 128 39 chr17 58008536 58008958 -31495595 + L1M3 LINE L1 1231 1614 -4768 1501 177 4 19 chr17 58008958 58009223 -31495330 + AluJo SINE Alu 41 301 -11 2307 100 3 0 chr17 58009224 58009535 -31495018 + AluSp SINE Alu 1 312 -1 2664 224 128 39 chr17 58009535 58010618 -31493935 + L1M3 LINE L1 1613 2874 -3508 2599 193 49 61 chr17 58010650 58011537 -31493016 + L1M3 LINE L1 4791 5683 -721 613 264 0 0 chr17 58011547 58011672 -31492881 - MER52A LTR ERV1 -1630 125 1 535 189 4 0 chr17 58011672 58011787 -31492766 + L1MB2 LINE L1 6054 6144 -27 1434 147 0 9 chr17 58013795 58014020 -31490533 - AluSg/x SINE Alu -11 299 77 305 311 56 0 chr17 58014150 58014240 -31490313 + L2 LINE L2 3178 3272 0 21 36 0 0 chr17 58015059 58015087 -31489466 + AT_rich Low_complexity Low_complexity 1 28 0 457 289 125 10 chr17 58015537 58015876 -31488677 - L1ME LINE L1 -402 5719 5340 3120 172 69 14 chr17 58016248 58016841 -31487712 - LTR57-int LTR ERVL -4717 626 1 2245 183 30 0 chr17 58016841 58017240 -31487313 - LTR57 LTR ERVL 0 411 1 2242 70 37 7 chr17 58017549 58017849 -31486704 + AluY SINE Alu 1 309 -2 21 0 0 0 chr17 58017851 58017872 -31486681 + AT_rich Low_complexity Low_complexity 1 21 0 1077 322 20 38 chr17 58018757 58019204 -31485349 + L1MA8 LINE L1 1542 1980 -5506 711 285 28 37 chr17 58019671 58020120 -31484433 + L1M3f LINE L1 535 1289 -4354 2715 113 0 0 chr17 58020120 58020493 -31484060 - THE1C LTR MaLR 0 375 3 9489 126 33 55 chr17 58020495 58022110 -31482443 - THE1C-int LTR MaLR 0 1580 1 2508 122 11 3 chr17 58022110 58022480 -31482073 - THE1C LTR MaLR -2 373 1 1238 271 19 12 chr17 58022480 58022967 -31481586 + L1MA8 LINE L1 2207 2696 -4869 25 0 0 0 chr17 58023467 58023492 -31481061 + AT_rich Low_complexity Low_complexity 1 25 0 756 313 25 12 chr17 58023768 58024011 -31480542 - MIR SINE MIR -14 248 3 18950 181 36 17 chr17 58024749 58028952 -31475601 + L1M1 LINE L1 15 4301 -3264 3043 140 2 66 chr17 58029059 58029643 -31474910 + L1M1 LINE L1 6464 6986 -735 2173 129 3 0 chr17 58029643 58029952 -31474601 + AluSx SINE Alu 1 310 -2 3043 140 2 66 chr17 58029952 58030160 -31474393 + L1M1 LINE L1 6986 7206 -515 6571 193 9 2 chr17 58030260 58031580 -31472973 + L1MA8 LINE L1 4653 5981 -1584 1844 133 4 0 chr17 58031581 58031836 -31472717 + AluSq SINE Alu 1 256 -57 1225 88 203 5 chr17 58031936 58032153 -31472400 + L1MA2 LINE L1 6045 6304 0 1247 209 42 0 chr17 58032574 58032885 -31471668 + MER33 DNA MER1_type 1 324 0 4997 145 36 8 chr17 58033712 58034609 -31469944 + L1MA8 LINE L1 6781 7702 -8 24 53 0 0 chr17 58034737 58034775 -31469778 + AT_rich Low_complexity Low_complexity 1 38 0 241 329 62 62 chr17 58034968 58035178 -31469375 + MLT1I LTR MaLR 64 273 -136 25 51 0 0 chr17 58036480 58036519 -31468034 + AT_rich Low_complexity Low_complexity 1 39 0 205 343 209 0 chr17 58036587 58036721 -31467832 - MIR SINE MIR -55 207 46 359 256 141 25 chr17 58036727 58036848 -31467705 - MER5B DNA MER1_type 0 178 44 21 0 0 0 chr17 58037835 58037856 -31466697 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr17 58038578 58038611 -31465942 + AT_rich Low_complexity Low_complexity 1 33 0 2034 70 0 12 chr17 58038960 58039241 -31465312 + AluY SINE Alu 39 316 0 734 312 116 36 chr17 58039396 58039991 -31464562 + L2 LINE L2 2686 3313 0 340 282 93 37 chr17 58040147 58040639 -31463914 - L1 LINE L1 -1120 5026 4499 335 299 86 51 chr17 58040971 58041168 -31463385 - L1 LINE L1 -2127 4019 3816 1656 143 0 79 chr17 58041235 58041563 -31462990 - MER50 LTR ERV1 0 734 433 1268 149 36 9 chr17 58041560 58041781 -31462772 - MER50 LTR ERV1 -507 227 1 * 298 188 40 50 chr17 58042084 58042185 -31462368 + MER105 DNA DNA 59 158 -46 314 398 69 22 chr17 58042344 58042791 -31461762 - HAL1 LINE L1 -875 1632 1165 312 276 0 20 chr17 58042802 58042900 -31461653 + CT-rich Low_complexity Low_complexity 4 99 0 2779 101 0 0 chr17 58042959 58043334 -31461219 - THE1C LTR MaLR 0 375 1 8841 140 42 47 chr17 58043334 58044922 -31459631 - THE1C-int LTR MaLR 0 1580 1 2586 121 5 0 chr17 58044922 58045295 -31459258 - THE1C LTR MaLR 0 375 1 1762 191 0 3 chr17 58045346 58045634 -31458919 - AluSx SINE Alu -25 287 1 465 215 22 59 chr17 58045858 58045993 -31458560 - LTR9 LTR ERV1 -482 130 1 1125 206 32 18 chr17 58045993 58046254 -31458299 - HUERS-P3 LTR ERV1 0 8919 6828 2337 56 0 0 chr17 58046269 58046554 -31457999 + AluY SINE Alu 1 285 -26 1136 211 0 5 chr17 58047710 58047928 -31456625 - MLT1-int LTR MaLR -144 1227 1011 1988 168 54 0 chr17 58048023 58048411 -31456142 - L1MB1 LINE L1 -1 6167 5759 1716 176 0 3 chr17 58048576 58048888 -31455665 + AluY SINE Alu 1 311 0 676 192 12 12 chr17 58049182 58049354 -31455199 - HUERS-P3 LTR ERV1 -3691 4125 3954 476 209 0 9 chr17 58049358 58049468 -31455085 - HUERS-P3 LTR ERV1 -1937 6982 6874 4124 183 24 8 chr17 58049479 58050218 -31454335 - HUERS-P3 LTR ERV1 -2007 6912 6162 * 4208 133 35 3 chr17 58050210 58050858 -31453695 - HUERS-P3 LTR ERV1 -3350 5569 4901 647 223 92 0 chr17 58050859 58050989 -31453564 - HUERS-P3 LTR ERV1 -4237 4682 4541 * 5493 148 15 32 chr17 58050981 58051897 -31452656 - HUERS-P3 LTR ERV1 -5642 3277 2377 555 244 74 6 chr17 58052613 58052789 -31451764 - LTR41 LTR ERVL -585 188 1 505 191 104 40 chr17 58052791 58052964 -31451589 - L1MB1 LINE L1 -720 5446 5263 208 224 30 0 chr17 58053036 58053103 -31451450 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 761 270 62 7 chr17 58053106 58053395 -31451158 - L1MB1 LINE L1 -905 5241 4937 333 316 65 37 chr17 58053391 58053606 -31450947 + HAL1 LINE L1 1776 1996 -511 * 967 193 0 0 chr17 58053607 58053768 -31450785 + FRAM SINE Alu 5 165 -11 346 290 70 43 chr17 58053777 58054146 -31450407 + HAL1 LINE L1 1980 2358 -149 212 89 0 67 chr17 58054225 58054270 -31450283 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 249 136 23 0 chr17 58054286 58054330 -31450223 + MADE1 DNA Mariner 1 45 -35 2364 89 0 9 chr17 58056457 58056773 -31447780 + AluSq SINE Alu 1 313 0 11361 32 2 0 chr17 58056826 58058228 -31446325 - L1PA3 LINE L1 -2366 3780 2376 13016 37 1 0 chr17 58058228 58060584 -31443969 + L1PA3 LINE L1 3799 6155 0 1240 189 74 32 chr17 58060992 58061277 -31443276 + AluJo SINE Alu 1 297 -5 2030 180 15 0 chr17 58061878 58062273 -31442280 - L1MB1 LINE L1 -1 6167 5767 282 179 0 0 chr17 58062381 58062437 -31442116 + (TG)n Simple_repeat Simple_repeat 2 57 0 1744 206 46 8 chr17 58062498 58062891 -31441662 + L1M3 LINE L1 5260 5667 -501 363 269 142 14 chr17 58063151 58063292 -31441261 + MIR SINE MIR 92 250 -12 483 276 57 47 chr17 58063620 58063812 -31440741 - MLT1J LTR MaLR -317 194 1 270 0 0 0 chr17 58063861 58063891 -31440662 + (A)n Simple_repeat Simple_repeat 1 30 0 890 267 26 61 chr17 58064121 58064590 -31439963 - L2 LINE L2 -169 3144 2697 414 324 88 19 chr17 58064620 58064836 -31439717 - MIR SINE MIR -13 249 19 21 0 0 0 chr17 58065150 58065171 -31439382 + AT_rich Low_complexity Low_complexity 1 21 0 360 246 0 0 chr17 58065409 58065478 -31439075 - Zaphod DNA AcHobo -1 4030 3962 7272 126 23 2 chr17 58065480 58066532 -31438021 - HSMAR1 DNA Mariner -2 1285 212 729 54 0 0 chr17 58066532 58066624 -31437929 + AluY SINE Alu 1 92 -219 3656 187 33 15 chr17 58066768 58067550 -31437003 + L1PA16 LINE L1 5354 6149 -17 21 57 0 0 chr17 58067712 58067747 -31436806 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr17 58067778 58067809 -31436744 + AT_rich Low_complexity Low_complexity 1 31 0 464 132 13 0 chr17 58068134 58068210 -31436343 - L1MA2 LINE L1 -12 6292 6216 2117 88 0 14 chr17 58068427 58068712 -31435841 - AluY SINE Alu -30 281 1 1946 191 17 15 chr17 58068723 58069132 -31435421 - L1MC2 LINE L1 -1 6343 5934 6021 117 15 55 chr17 58069245 58070340 -31434213 - L1MA2 LINE L1 0 6304 5254 231 188 0 0 chr17 58070350 58070398 -31434155 + L1 LINE L1 4664 4711 -1435 1352 131 0 4 chr17 58070406 58070665 -31433888 - L1M1 LINE L1 -587 5597 5211 1003 212 29 34 chr17 58070664 58071863 -31432690 - L1M1 LINE L1 -6268 1297 6 * 301 247 82 12 chr17 58071943 58072028 -31432525 + HAL1 LINE L1 122 212 -2295 514 338 40 0 chr17 58072100 58072298 -31432255 + HAL1 LINE L1 450 655 -1852 383 225 53 46 chr17 58072296 58072447 -31432106 + HAL1 LINE L1 1082 1233 -1274 * 2458 111 36 0 chr17 58072458 58072820 -31431733 + THE1C LTR MaLR 1 375 0 304 342 9 0 chr17 58074050 58074161 -31430392 + MER81 DNA DNA 3 114 0 27 49 0 0 chr17 58074369 58074410 -31430143 + AT_rich Low_complexity Low_complexity 1 41 0 8874 237 75 24 chr17 58075639 58077383 -31427170 - L1PA16 LINE L1 0 7604 5951 1433 178 16 63 chr17 58077383 58077686 -31426867 - AluJo SINE Alu -19 293 5 8874 237 75 24 chr17 58077686 58078389 -31426164 - L1PA16 LINE L1 -1653 5951 5285 2464 114 0 3 chr17 58078389 58078758 -31425795 - L1PB1 LINE L1 -1 6150 5783 8874 237 75 24 chr17 58078758 58080694 -31423859 - L1PA16 LINE L1 -2319 5285 2993 423 325 6 6 chr17 58080728 58080885 -31423668 - L1PA16 LINE L1 -5307 2274 2118 1106 51 0 0 chr17 58081215 58081352 -31423201 + L1PA7 LINE L1 6017 6153 -1 314 252 95 78 chr17 58081484 58081562 -31422991 + L1MDb LINE L1 1342 1417 -5230 1878 140 55 3 chr17 58081562 58081854 -31422699 + AluSg SINE Alu 1 307 -3 314 252 95 78 chr17 58081854 58082017 -31422536 + L1MDb LINE L1 1417 1587 -5060 180 0 0 0 chr17 58082037 58082057 -31422496 + (TG)n Simple_repeat Simple_repeat 1 20 0 261 98 0 0 chr17 58082057 58082098 -31422455 + (GA)n Simple_repeat Simple_repeat 2 42 0 265 310 47 41 chr17 58082116 58082287 -31422266 + L1MDb LINE L1 1529 1700 -4842 2010 159 0 3 chr17 58082444 58082746 -31421807 + AluSp SINE Alu 1 301 -12 2258 105 0 7 chr17 58083083 58083387 -31421166 - AluSg1 SINE Alu -7 302 1 608 149 7 50 chr17 58083997 58084138 -31420415 + LTR36 LTR ERV1 1 135 -476 522 143 0 0 chr17 58084239 58084316 -31420237 + LTR36 LTR ERV1 535 611 0 859 130 8 24 chr17 58084420 58084589 -31419964 + LTR7 LTR ERV1 1 218 -232 870 166 88 49 chr17 58084771 58084976 -31419577 + LTR7 LTR ERV1 238 450 0 445 308 104 33 chr17 58084979 58085775 -31418778 - L1M4 LINE L1 -2446 3700 2848 333 72 6 0 chr17 58085794 58085844 -31418709 + MER4D LTR ERV1 167 218 -561 276 59 0 0 chr17 58085836 58085870 -31418683 - U2 snRNA snRNA -154 34 1 * 1942 175 195 17 chr17 58085871 58086352 -31418201 + LTR49 LTR ERV1 29 595 0 245 215 51 0 chr17 58086545 58086624 -31417929 + (TA)n Simple_repeat Simple_repeat 1 83 0 262 108 0 0 chr17 58086663 58086700 -31417853 - MER57B LTR ERV1 -66 368 332 702 35 0 0 chr17 58086856 58086942 -31417611 + L1PA5 LINE L1 6064 6149 -5 1054 127 0 0 chr17 58086991 58087141 -31417412 + MER57B-int LTR ERV1 6999 7148 -389 656 146 23 31 chr17 58087141 58087271 -31417282 + LTR54B LTR ERV1 3 131 -367 1490 96 130 4 chr17 58087271 58087501 -31417052 + MER57B-int LTR ERV1 7279 7537 0 1532 118 0 0 chr17 58087501 58087712 -31416841 + MER57B LTR ERV1 1 211 -223 283 307 113 42 chr17 58087844 58088056 -31416497 - L1MEd LINE L1 -5581 538 312 405 39 0 0 chr17 58088107 58088158 -31416395 + (CA)n Simple_repeat Simple_repeat 2 52 0 238 242 30 0 chr17 58088242 58088341 -31416212 - L1MEd LINE L1 -5989 130 29 284 294 272 26 chr17 58088408 58088871 -31415682 + L2 LINE L2 1903 2479 -835 389 339 156 11 chr17 58089863 58090049 -31414504 + MIR SINE MIR 2 214 -48 21 36 0 0 chr17 58092160 58092188 -31412365 + AT_rich Low_complexity Low_complexity 1 28 0 1201 228 37 62 chr17 58092534 58092936 -31411617 - LTR10C LTR ERV1 0 562 188 198 143 0 0 chr17 58092956 58092991 -31411562 + (TA)n Simple_repeat Simple_repeat 1 35 0 260 261 83 83 chr17 58093471 58093701 -31410852 - L1M4 LINE L1 -1821 4325 4096 2011 111 0 13 chr17 58094454 58094752 -31409801 - AluY SINE Alu -1 310 17 275 54 0 0 chr17 58094752 58094789 -31409764 - AluY SINE Alu -262 38 2 299 342 60 33 chr17 58095744 58095928 -31408625 - MIR SINE MIR -18 244 56 1010 206 14 0 chr17 58096965 58097174 -31407379 + AluJo SINE Alu 98 309 -3 272 204 0 0 chr17 58097525 58097574 -31406979 + AluJ/monomer SINE Alu 243 291 -10 2219 128 0 0 chr17 58097706 58098010 -31406543 + AluSx SINE Alu 1 304 -8 2083 105 44 7 chr17 58098010 58098305 -31406248 + AluSg SINE Alu 1 306 -4 331 267 129 0 chr17 58098584 58098685 -31405868 - HAL1b LINE L1 -846 502 389 357 310 21 14 chr17 58098887 58099029 -31405524 + MER117 DNA MER1_type 4 146 -51 373 305 40 17 chr17 58099394 58099568 -31404985 - LTR33 LTR ERVL 0 521 344 407 306 31 16 chr17 58099833 58100088 -31404465 + L1M4 LINE L1 2110 2368 -3778 434 225 73 11 chr17 58100115 58100293 -31404260 + MER53 DNA DNA 1 189 0 37 23 0 0 chr17 58101167 58101211 -31403342 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr17 58101289 58101324 -31403229 + AT_rich Low_complexity Low_complexity 1 35 0 371 177 211 24 chr17 58101331 58101540 -31403013 - L1ME4a LINE L1 -43 6078 5831 251 291 0 13 chr17 58101697 58101776 -31402777 - L1ME4a LINE L1 -517 5604 5527 21 0 0 0 chr17 58101810 58101831 -31402722 + AT_rich Low_complexity Low_complexity 1 21 0 273 234 91 13 chr17 58101930 58102007 -31402546 + MER103 DNA DNA 18 100 -66 205 149 21 21 chr17 58102313 58102360 -31402193 + T-rich Low_complexity Low_complexity 5 51 0 2427 157 45 0 chr17 58103615 58104085 -31400468 - L1MA8 LINE L1 -3 6288 5798 823 100 38 19 chr17 58104621 58104804 -31399749 + CT-rich Low_complexity Low_complexity 1 186 0 1058 122 0 6 chr17 58104804 58104976 -31399577 + (TTTC)n Simple_repeat Simple_repeat 4 174 0 1849 119 18 25 chr17 58104981 58105267 -31399286 - AluSg SINE Alu -26 284 1 360 338 53 7 chr17 58105553 58105704 -31398849 + MIR SINE MIR 22 179 -83 2867 13 0 0 chr17 58106111 58106422 -31398131 - AluYb8 SINE Alu -7 311 1 333 270 27 70 chr17 58106622 58106807 -31397746 + Charlie8 DNA MER1_type 88 264 -2153 21 36 0 0 chr17 58107398 58107426 -31397127 + AT_rich Low_complexity Low_complexity 1 28 0 250 389 8 16 chr17 58108328 58108454 -31396099 - L2 LINE L2 -1 3312 3188 311 299 42 18 chr17 58108621 58108750 -31395803 + MLT1J2 LTR MaLR 37 166 -243 23 0 0 0 chr17 58109314 58109337 -31395216 + AT_rich Low_complexity Low_complexity 1 23 0 220 171 0 0 chr17 58109364 58109399 -31395154 + (TG)n Simple_repeat Simple_repeat 2 36 0 837 331 104 23 chr17 58109726 58110569 -31393984 - L2 LINE L2 -2 3311 2398 1891 204 59 109 chr17 58110724 58111455 -31393098 + LTR8A LTR ERV1 34 727 0 1273 336 178 23 chr17 58111455 58112363 -31392190 - L2 LINE L2 -1007 2307 1157 2058 83 0 0 chr17 58112363 58112627 -31391926 - AluY SINE Alu -15 296 33 1273 336 178 23 chr17 58112627 58112948 -31391605 - L2 LINE L2 -2157 1157 887 442 268 124 55 chr17 58113019 58113373 -31391180 + MLT1J LTR MaLR 79 511 0 442 321 109 38 chr17 58113390 58113683 -31390870 - L2 LINE L2 -2444 870 557 2153 69 3 28 chr17 58113850 58114163 -31390390 + AluY SINE Alu 1 306 0 453 293 49 6 chr17 58114163 58114327 -31390226 + MIR SINE MIR 88 258 -4 577 121 0 0 chr17 58114745 58114836 -31389717 - AluSp/q SINE Alu 0 313 223 2103 141 0 3 chr17 58114943 58115256 -31389297 + AluSx SINE Alu 1 312 0 237 241 127 0 chr17 58115629 58115708 -31388845 + L1MC4a LINE L1 6196 6284 -1524 4220 206 45 46 chr17 58115815 58117435 -31387118 - L1MB3 LINE L1 -57 6126 4516 7206 39 6 1 chr17 58117440 58119074 -31385479 + L1PA5 LINE L1 4548 6150 -4 365 229 0 0 chr17 58119075 58119145 -31385408 + MER112 DNA MER1_type 186 255 -5 24 32 0 0 chr17 58119155 58119186 -31385367 + AT_rich Low_complexity Low_complexity 1 31 0 438 220 9 0 chr17 58119210 58119319 -31385234 - L1MB3 LINE L1 -1630 4516 4407 2012 169 30 50 chr17 58119323 58119762 -31384791 - L1MA9 LINE L1 -42 6270 5841 449 254 22 0 chr17 58119787 58119951 -31384602 - L1MEc LINE L1 -3804 2411 2260 287 130 0 0 chr17 58120059 58120105 -31384448 + L1P3 LINE L1 539 584 -5877 25 31 0 0 chr17 58120350 58120382 -31384171 + AT_rich Low_complexity Low_complexity 1 32 0 614 299 55 20 chr17 58120530 58120784 -31383769 - L1MEc LINE L1 -6099 297 35 10420 147 22 66 chr17 58121199 58123846 -31380707 + L1P3 LINE L1 10 2636 -3825 7110 57 2 0 chr17 58123874 58125379 -31379174 + L1PA5 LINE L1 4648 6154 0 5980 94 39 2 chr17 58125384 58126438 -31378115 + L1PA8 LINE L1 5072 6159 -13 30 45 0 0 chr17 58126541 58126585 -31377968 + AT_rich Low_complexity Low_complexity 1 44 0 2092 100 3 3 chr17 58126585 58126875 -31377678 - AluSc SINE Alu -19 290 1 218 160 20 0 chr17 58127217 58127267 -31377286 + GA-rich Low_complexity Low_complexity 6 56 0 728 240 47 108 chr17 58128032 58128394 -31376159 - MER102b DNA MER1_type 0 341 2 231 266 96 0 chr17 58128639 58128733 -31375820 + L1ME3 LINE L1 6040 6142 -20 252 59 0 0 chr17 58128746 58128780 -31375773 + (TAA)n Simple_repeat Simple_repeat 1 34 0 25 31 0 0 chr17 58129529 58129561 -31374992 + AT_rich Low_complexity Low_complexity 1 32 0 204 67 0 0 chr17 58129716 58129746 -31374807 + (A)n Simple_repeat Simple_repeat 1 30 0 552 262 18 0 chr17 58130666 58130834 -31373719 - L1MEc LINE L1 -5459 937 767 651 251 75 22 chr17 58131023 58131250 -31373303 - MIR SINE MIR 0 262 24 463 225 79 22 chr17 58131411 58131589 -31372964 - L1MD3 LINE L1 0 7995 7808 315 355 72 14 chr17 58131969 58132107 -31372446 + LTR33 LTR ERVL 47 192 -329 352 234 188 31 chr17 58132358 58132550 -31372003 + L1ME4a LINE L1 5634 5855 -266 403 301 30 60 chr17 58133622 58133788 -31370765 - MIR SINE MIR -81 181 21 289 288 37 43 chr17 58134315 58134478 -31370075 + LTR28 LTR ERV1 555 716 -304 * 2667 154 46 76 chr17 58134454 58135018 -31369535 + MER52A LTR ERV1 1209 1755 0 338 273 21 75 chr17 58135143 58135165 -31369388 + Charlie2 DNA MER1_type 197 219 -2563 402 57 0 0 chr17 58135165 58135218 -31369335 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 273 21 75 chr17 58135218 58135382 -31369171 + Charlie2 DNA MER1_type 219 373 -2409 399 278 83 13 chr17 58135500 58135684 -31368869 - L1MDa LINE L1 -2366 3849 3634 2052 137 0 0 chr17 58135684 58135977 -31368576 - AluSx SINE Alu -14 298 6 399 278 83 13 chr17 58135977 58136075 -31368478 - L1MDa LINE L1 -2581 3634 3544 25 0 0 0 chr17 58136126 58136151 -31368402 + AT_rich Low_complexity Low_complexity 1 25 0 262 229 142 10 chr17 58136201 58136406 -31368147 - L1MDa LINE L1 -2841 3374 3143 917 286 16 23 chr17 58136648 58137106 -31367447 - L1MDa LINE L1 -3593 2622 2167 238 236 164 9 chr17 58137452 58137562 -31366991 - L1MDa LINE L1 -4556 1659 1533 320 291 56 56 chr17 58137659 58137838 -31366715 - L1MDa LINE L1 -4937 1459 1281 841 196 21 102 chr17 58138486 58138641 -31365912 + MER20 DNA MER1_type 4 135 -84 1775 150 56 12 chr17 58138641 58138961 -31365592 - MER1B DNA MER1_type 0 337 4 841 196 21 102 chr17 58138961 58139040 -31365513 + MER20 DNA MER1_type 135 219 0 207 171 0 0 chr17 58139350 58139385 -31365168 + (TG)n Simple_repeat Simple_repeat 1 35 0 429 297 66 53 chr17 58140106 58140654 -31363899 - L1M4 LINE L1 -1544 4602 4048 580 294 25 45 chr17 58140824 58141069 -31363484 + L3 LINE CR1 1181 1420 -157 228 238 131 24 chr17 58142093 58142177 -31362376 - L2 LINE L2 -46 3267 3175 328 333 92 33 chr17 58142353 58142593 -31361960 + MIR SINE MIR 9 262 0 812 303 65 16 chr17 58143011 58143318 -31361235 + LTR16A LTR ERVL 125 446 -4 804 213 16 156 chr17 58143411 58143861 -31360692 + L1ME3A LINE L1 5775 6161 -9 4789 166 77 38 chr17 58144272 58145456 -31359097 + Tigger3b DNA MER2_type 1 1230 -1 328 202 20 111 chr17 58145624 58145723 -31358830 + MER21B LTR ERV1 1 90 -773 830 288 56 16 chr17 58145777 58146027 -31358526 + MER21B LTR ERV1 94 353 -510 588 241 18 35 chr17 58146128 58146298 -31358255 + MLT1A1 LTR MaLR 187 353 -12 1440 170 44 22 chr17 58146916 58147234 -31357319 + L1MB7 LINE L1 5841 6165 -19 233 221 73 15 chr17 58148351 58148419 -31356134 + MIR SINE MIR 183 254 -8 235 306 71 10 chr17 58148528 58148626 -31355927 - MIR SINE MIR -73 189 86 2082 148 47 5 chr17 58149543 58149928 -31354625 + MER57A LTR ERV1 3 403 0 1956 138 10 3 chr17 58150175 58150473 -31354080 + AluSx SINE Alu 1 300 -12 185 0 40 0 chr17 58150532 58150557 -31353996 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2902 196 93 50 chr17 58150837 58151733 -31352820 + MER52A LTR ERV1 1 1149 -606 189 0 0 0 chr17 58152113 58152134 -31352419 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr17 58152623 58152644 -31351909 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr17 58153060 58153091 -31351462 + AT_rich Low_complexity Low_complexity 1 31 0 248 372 25 18 chr17 58153896 58154014 -31350539 + MIR SINE MIR 5 122 -95 6286 142 19 42 chr17 58154567 58155780 -31348773 - L1PA13 LINE L1 0 6163 5030 2178 103 0 3 chr17 58155780 58156062 -31348491 - AluSp SINE Alu -32 281 1 6286 142 19 42 chr17 58156062 58156990 -31347563 - L1PA13 LINE L1 -1133 5030 4083 317 287 176 0 chr17 58157816 58157924 -31346629 + L2 LINE L2 3182 3308 -5 269 359 14 58 chr17 58157982 58158330 -31346223 - L2 LINE L2 -1156 2158 1826 199 353 59 12 chr17 58159675 58159760 -31344793 + MIR SINE MIR 53 141 -67 384 356 10 16 chr17 58159821 58160096 -31344457 + L1MC/D LINE L1 5440 5710 -531 21 71 0 0 chr17 58160573 58160615 -31343938 + AT_rich Low_complexity Low_complexity 1 42 0 436 165 12 24 chr17 58160678 58160763 -31343790 - LTR27-int LTR ERV1 -995 6423 6340 8227 131 30 40 chr17 58160764 58161311 -31343242 - LTR27-int LTR ERV1 -717 5229 4678 2032 146 7 0 chr17 58161311 58161619 -31342934 + AluSg SINE Alu 1 310 0 8227 131 30 40 chr17 58161619 58162624 -31341929 - LTR27-int LTR ERV1 -1268 4678 3693 39 0 0 0 chr17 58162624 58162663 -31341890 + AT_rich Low_complexity Low_complexity 1 39 0 208 147 0 0 chr17 58162680 58162714 -31341839 + (TTATA)n Simple_repeat Simple_repeat 4 37 0 308 190 0 0 chr17 58162714 58162772 -31341781 - LTR27-int LTR ERV1 -3179 4358 4301 5268 29 3 0 chr17 58162803 58163425 -31341128 - L1PA3 LINE L1 0 6155 5532 6274 32 0 0 chr17 58163425 58164175 -31340378 + L1P LINE L1 4032 4781 -1365 5883 142 50 111 chr17 58164176 58165638 -31338915 - LTR27-int LTR ERV1 -2984 2233 861 313 187 178 19 chr17 58165629 58165736 -31338817 - LTR27-int LTR ERV1 -6585 506 383 * 319 252 73 34 chr17 58165704 58165906 -31338647 - LTR27-int LTR ERV1 -6837 254 39 602 200 14 43 chr17 58165937 58166077 -31338476 - LTR27 LTR ERV1 -1 635 500 677 253 20 29 chr17 58166116 58166349 -31338204 - LTR28 LTR ERV1 -138 498 318 1883 214 26 48 chr17 58167694 58168189 -31336364 - MLT1D LTR MaLR -10 495 12 268 252 7 7 chr17 58168214 58168349 -31336204 + (TA)n Simple_repeat Simple_repeat 2 136 0 255 79 0 0 chr17 58169261 58169299 -31335254 + (CA)n Simple_repeat Simple_repeat 2 39 0 2154 99 14 0 chr17 58169364 58169658 -31334895 + AluSq SINE Alu 1 298 -15 202 347 17 110 chr17 58169678 58169851 -31334702 + L2 LINE L2 3028 3184 -88 21 57 0 0 chr17 58171325 58171360 -31333193 + AT_rich Low_complexity Low_complexity 1 35 0 205 349 21 21 chr17 58171850 58171979 -31332574 - MIR SINE MIR -58 150 20 493 266 52 99 chr17 58172152 58172404 -31332149 - MER102a DNA MER1_type 0 330 91 1120 52 35 6 chr17 58172467 58172639 -31331914 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 264 122 0 0 chr17 58172908 58172949 -31331604 + (TG)n Simple_repeat Simple_repeat 2 42 0 348 320 174 30 chr17 58173124 58173486 -31331067 + L2 LINE L2 2898 3311 -2 340 328 63 84 chr17 58174042 58174472 -31330081 + MLT1H1 LTR MaLR 112 532 -23 460 194 7 83 chr17 58176194 58176338 -31328215 + L1MC5 LINE L1 6941 7073 -888 2556 141 26 35 chr17 58176338 58176941 -31327612 - MER4E LTR ERV1 0 779 1 449 189 4 20 chr17 58176980 58177093 -31327460 + L1MC5 LINE L1 7129 7228 -733 241 372 13 51 chr17 58177348 58177504 -31327049 - MLT1I LTR MaLR -162 247 98 722 251 104 58 chr17 58177714 58178253 -31326300 + L1MC5 LINE L1 7337 7900 -61 323 292 26 18 chr17 58179540 58179653 -31324900 + MIR SINE MIR 76 189 -73 2343 70 10 0 chr17 58180878 58181180 -31323373 + AluY SINE Alu 1 305 -6 331 213 13 20 chr17 58181567 58181644 -31322909 + (TA)n Simple_repeat Simple_repeat 2 79 -71 2057 132 3 0 chr17 58181644 58181932 -31322621 + AluSx SINE Alu 1 289 -23 331 213 13 20 chr17 58181932 58182004 -31322549 + (TA)n Simple_repeat Simple_repeat 79 150 0 8776 28 11 3 chr17 58182084 58183926 -31320627 - L1PA3 LINE L1 0 6155 4307 12911 31 0 0 chr17 58183926 58185489 -31319064 + L1PA3 LINE L1 2741 4303 -1843 359 194 11 0 chr17 58185489 58185582 -31318971 + (TA)n Simple_repeat Simple_repeat 1 94 0 288 111 0 0 chr17 58185624 58185669 -31318884 + (TC)n Simple_repeat Simple_repeat 2 46 0 243 259 74 0 chr17 58185990 58186044 -31318509 + L2 LINE L2 3254 3311 -2 201 39 0 0 chr17 58186264 58186290 -31318263 + (CATA)n Simple_repeat Simple_repeat 4 29 0 213 39 0 0 chr17 58186353 58186379 -31318174 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 25237 145 15 20 chr17 58187084 58192439 -31312114 + L1PA8A LINE L1 573 5957 -489 3925 174 91 42 chr17 58192439 58193460 -31311093 + MER11C LTR ERVK 1 1071 0 25237 145 15 20 chr17 58193460 58193935 -31310618 + L1PA8A LINE L1 5957 6433 -13 216 97 0 0 chr17 58194091 58194122 -31310431 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 2074 110 0 0 chr17 58194709 58194982 -31309571 + AluSg SINE Alu 1 273 -37 747 267 36 41 chr17 58195038 58195259 -31309294 - MIR SINE MIR 0 262 43 344 340 63 46 chr17 58195300 58195585 -31308968 - L2 LINE L2 -342 2972 2683 229 289 13 26 chr17 58196536 58196612 -31307941 - MIR3 SINE MIR 0 208 134 * 491 272 24 35 chr17 58196595 58196764 -31307789 - MER5B DNA MER1_type -5 173 7 222 271 24 71 chr17 58196769 58196854 -31307699 - L3 LINE CR1 -44 1533 1453 219 218 0 0 chr17 58196927 58196982 -31307571 + (TG)n Simple_repeat Simple_repeat 2 56 0 285 401 21 14 chr17 58197003 58197145 -31307408 + L2 LINE L2 3123 3265 -7 247 314 105 0 chr17 58197525 58197649 -31306904 - L3 LINE CR1 -266 1311 1175 876 220 16 5 chr17 58199467 58199653 -31304900 + MER5A DNA MER1_type 2 189 0 219 69 0 0 chr17 58199939 58199968 -31304585 + (A)n Simple_repeat Simple_repeat 1 29 0 724 175 0 28 chr17 58200592 58200735 -31303818 + FLAM_C SINE Alu 5 143 0 696 253 20 0 chr17 58200746 58200896 -31303657 + AluJo SINE Alu 118 270 -42 21 57 0 0 chr17 58204610 58204645 -31299908 + AT_rich Low_complexity Low_complexity 1 35 0 181 321 0 0 chr17 58204842 58204895 -31299658 - L2 LINE L2 -15 3257 3205 1985 139 67 9 chr17 58206736 58207080 -31297473 + THE1B LTR MaLR 1 364 0 199 306 20 0 chr17 58207223 58207272 -31297281 + L2 LINE L2 3259 3308 -5 735 256 56 14 chr17 58207492 58207707 -31296846 - MER58A DNA MER1_type 0 224 1 345 386 51 6 chr17 58207794 58207952 -31296601 - L2 LINE L2 -4 3268 3104 1742 155 7 0 chr17 58207975 58208252 -31296301 - L1PB4 LINE L1 -83 6073 5795 344 230 10 0 chr17 58208269 58208369 -31296184 + (TA)n Simple_repeat Simple_repeat 1 101 0 2868 154 47 6 chr17 58208442 58209000 -31295553 - L1PB4 LINE L1 -361 5795 5216 1260 118 43 0 chr17 58209000 58209187 -31295366 + AluSg SINE Alu 1 195 -115 222 118 0 0 chr17 58209189 58209223 -31295330 + (A)n Simple_repeat Simple_repeat 1 34 0 23 78 0 0 chr17 58209418 58209469 -31295084 + AT_rich Low_complexity Low_complexity 1 51 0 254 320 51 39 chr17 58209640 58209874 -31294679 + Charlie8 DNA MER1_type 3 239 -2178 426 211 53 44 chr17 58209893 58210007 -31294546 + MER5B DNA MER1_type 2 116 -62 1969 205 54 2 chr17 58210007 58210412 -31294141 - MSTB LTR MaLR 0 426 1 4721 198 33 11 chr17 58210412 58211325 -31293228 - MSTB-int LTR MaLR 0 1651 719 252 146 0 0 chr17 58211325 58211366 -31293187 - MSTB LTR MaLR -385 41 1 1387 236 75 9 chr17 58211397 58211732 -31292821 + L1MDa LINE L1 19 375 -6165 464 213 33 2 chr17 58211844 58211978 -31292575 + L1 LINE L1 5089 5223 -923 2029 101 4 4 chr17 58211992 58212270 -31292283 - AluSc SINE Alu -31 278 1 22 0 0 0 chr17 58212395 58212417 -31292136 + AT_rich Low_complexity Low_complexity 1 22 0 268 274 9 28 chr17 58212606 58212712 -31291841 + (CATATA)n Simple_repeat Simple_repeat 2 105 0 214 322 11 23 chr17 58213117 58213204 -31291349 + L3 LINE CR1 1155 1240 -337 714 324 33 50 chr17 58213909 58214103 -31290450 + L1MC/D LINE L1 4285 4481 -1665 1653 191 0 0 chr17 58214103 58214426 -31290127 - AluJb SINE Alu 0 323 1 714 324 33 50 chr17 58214426 58214930 -31289623 + L1MC/D LINE L1 4481 4972 -1174 50 18 0 0 chr17 58214953 58215010 -31289543 + AT_rich Low_complexity Low_complexity 1 57 0 452 294 133 0 chr17 58215174 58215429 -31289124 + L1MC/D LINE L1 5297 5585 -774 23 78 0 0 chr17 58215570 58215621 -31288932 + AT_rich Low_complexity Low_complexity 1 51 0 272 279 39 78 chr17 58215928 58216082 -31288471 - L2 LINE L2 -47 3266 3119 251 253 50 0 chr17 58216137 58216236 -31288317 + (TATATG)n Simple_repeat Simple_repeat 3 106 0 31 0 0 0 chr17 58216316 58216347 -31288206 + AT_rich Low_complexity Low_complexity 1 31 0 1332 261 171 17 chr17 58216600 58217191 -31287362 + LTR50 LTR ERVL 15 696 -99 495 352 56 6 chr17 58217323 58217485 -31287068 - L2 LINE L2 -1 3271 3102 3576 37 1 0 chr17 58217830 58218453 -31286100 - L1P2 LINE L1 -580 5574 4951 1119 70 7 0 chr17 58218446 58218589 -31285964 + L1P2 LINE L1 5554 5697 -457 * 2010 120 43 0 chr17 58218910 58219210 -31285343 + AluSp SINE Alu 1 313 0 7446 188 17 5 chr17 58219266 58220902 -31283651 + L1PA15 LINE L1 3842 5493 -668 354 100 0 0 chr17 58220902 58220952 -31283601 - MLT2A1 LTR ERVL 0 444 395 2729 89 30 8 chr17 58220997 58221391 -31283162 - MLT2A1 LTR ERVL -41 403 1 1306 103 0 54 chr17 58221392 58221518 -31283035 + L1PA15 LINE L1 5490 5602 -563 2058 133 17 0 chr17 58221518 58221820 -31282733 + AluSq SINE Alu 1 307 -6 1306 103 0 54 chr17 58221820 58221897 -31282656 + L1PA15 LINE L1 5602 5682 -483 1007 139 29 12 chr17 58221997 58222170 -31282383 + L1PA15 LINE L1 5981 6156 -9 556 231 151 50 chr17 58222404 58222603 -31281950 + MER20 DNA MER1_type 1 219 0 937 254 0 35 chr17 58222702 58222985 -31281568 + L1MB1 LINE L1 1751 2023 -5007 2959 227 73 17 chr17 58222992 58223891 -31280662 + L1MB1 LINE L1 4017 4966 -2140 12225 160 17 6 chr17 58223894 58225633 -31278920 - Tigger1 DNA MER2_type -1 2417 651 2178 177 31 19 chr17 58225633 58226056 -31278497 - MSTA LTR MaLR 0 428 1 12225 160 17 6 chr17 58226056 58226409 -31278144 - Tigger1 DNA MER2_type -1767 651 303 449 239 101 0 chr17 58226509 58226618 -31277935 + FRAM SINE Alu 29 148 -28 887 195 4 44 chr17 58226618 58226844 -31277709 + L1MA10 LINE L1 6115 6331 -3 189 0 0 0 chr17 58228757 58228778 -31275775 + (TAA)n Simple_repeat Simple_repeat 1 21 0 2201 121 0 0 chr17 58229271 58229577 -31274976 - AluSx SINE Alu -6 306 1 253 75 0 0 chr17 58229598 58229638 -31274915 - L1PA14 LINE L1 -15 6146 6107 1403 215 31 12 chr17 58229739 58230060 -31274493 - Tigger1 DNA MER2_type -2091 327 1 5556 199 52 7 chr17 58230061 58230299 -31274254 + L1MB1 LINE L1 4968 5194 -1949 426 20 0 0 chr17 58230299 58230350 -31274203 + (CA)n Simple_repeat Simple_repeat 2 52 0 5556 199 52 7 chr17 58230350 58230891 -31273662 + L1MB1 LINE L1 5194 5709 -1434 965 242 58 0 chr17 58230891 58231114 -31273439 + MER46A DNA MER2_type 1 236 0 5556 199 52 7 chr17 58231114 58231898 -31272655 + L1MB1 LINE L1 5709 6607 -536 2742 216 6 4 chr17 58231911 58232453 -31272100 - MER44D DNA MER2_type -7 598 1 1657 228 28 0 chr17 58232453 58232843 -31271710 + L1MB1 LINE L1 6605 7005 -144 2201 109 0 3 chr17 58233309 58233612 -31270941 - AluSg SINE Alu -6 304 3 316 231 66 11 chr17 58233824 58233915 -31270638 - L1MC4 LINE L1 -1350 6692 6597 302 123 18 0 chr17 58233936 58233993 -31270560 + (TA)n Simple_repeat Simple_repeat 2 59 0 23 54 0 0 chr17 58234377 58234414 -31270139 + AT_rich Low_complexity Low_complexity 1 37 0 2080 181 23 3 chr17 58234425 58234811 -31269742 - L1 LINE L1 -1874 4272 3879 1967 160 123 8 chr17 58234812 58235193 -31269360 + MSTA LTR MaLR 1 425 -3 3366 172 47 0 chr17 58235195 58235810 -31268743 + MSTA-int LTR MaLR 1 644 -1007 248 186 0 0 chr17 58235816 58235859 -31268694 + MSTA LTR MaLR 386 428 0 1952 200 24 7 chr17 58235859 58236279 -31268274 - L1 LINE L1 -2264 3882 3456 14042 101 21 1 chr17 58236286 58239180 -31265373 + L1PA7 LINE L1 3231 6162 0 512 304 121 14 chr17 58239662 58239869 -31264684 + MER102b DNA MER1_type 113 341 0 405 0 0 0 chr17 58242172 58242217 -31262336 + (CA)n Simple_repeat Simple_repeat 2 46 0 444 295 155 14 chr17 58242235 58242442 -31262111 + MIR SINE MIR 7 242 -20 40 59 0 0 chr17 58243700 58243768 -31260785 + AT_rich Low_complexity Low_complexity 1 68 0 26 30 0 0 chr17 58244105 58244138 -31260415 + AT_rich Low_complexity Low_complexity 1 33 0 462 79 0 0 chr17 58244749 58244812 -31259741 + (TG)n Simple_repeat Simple_repeat 2 64 0 273 241 21 145 chr17 58245094 58245239 -31259314 - L2 LINE L2 -221 3051 2925 320 297 23 62 chr17 58245683 58245811 -31258742 - L2 LINE L2 -5 3267 3145 352 319 89 39 chr17 58246049 58246306 -31258247 - L2 LINE L2 -440 2874 2605 398 326 34 22 chr17 58246443 58246621 -31257932 + MLT1K LTR MaLR 173 352 -236 806 207 70 18 chr17 58246678 58246905 -31257648 + MER96B DNA MER1_type? 169 407 -10 659 161 32 7 chr17 58247462 58247617 -31256936 + CT-rich Low_complexity Low_complexity 2 160 0 399 393 16 16 chr17 58247678 58247861 -31256692 + LTR67 LTR ERVL 113 295 -262 778 230 0 0 chr17 58247880 58248032 -31256521 + MLT1E1 LTR MaLR 499 650 -4 273 304 65 0 chr17 58248358 58248450 -31256103 + MIR SINE MIR 63 160 -102 22040 31 0 7 chr17 58248453 58251172 -31253381 + L1PA4 LINE L1 1971 4672 -1474 7274 30 10 8 chr17 58251272 58252700 -31251853 + L1PA4 LINE L1 4723 6152 -3 372 97 0 0 chr17 58253038 58253100 -31251453 + (CA)n Simple_repeat Simple_repeat 1 62 0 30 27 0 0 chr17 58253137 58253174 -31251379 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr17 58253602 58253624 -31250929 + (CA)n Simple_repeat Simple_repeat 2 23 0 211 377 68 27 chr17 58254101 58254247 -31250306 - MIR SINE MIR -108 154 3 215 313 116 27 chr17 58255148 58255295 -31249258 - L2 LINE L2 0 3313 3154 216 326 0 22 chr17 58255564 58255653 -31248900 - L2 LINE L2 -452 2862 2776 1342 159 14 75 chr17 58255699 58255994 -31248559 + AluJb SINE Alu 21 297 -15 187 384 24 32 chr17 58256257 58256382 -31248171 - MIR SINE MIR -66 142 19 409 344 21 16 chr17 58257421 58257613 -31246940 - L2 LINE L2 -4 3309 3117 1877 222 43 51 chr17 58257613 58258122 -31246431 + MLT1D LTR MaLR 1 505 0 451 129 0 0 chr17 58258238 58258323 -31246230 + L1MA7 LINE L1 6207 6291 0 266 325 40 78 chr17 58258328 58258642 -31245911 + L2 LINE L2 2736 3042 -230 235 212 106 0 chr17 58359368 58359434 -31145119 + AluS SINE Alu 18 90 -212 1734 292 46 22 chr17 58360890 58361678 -31142875 + L1 LINE L1 3466 4272 -1874 336 48 0 0 chr17 58361949 58361991 -31142562 + (TCTCCC)n Simple_repeat Simple_repeat 5 46 0 343 283 26 26 chr17 58362523 58362636 -31141917 + MIR SINE MIR 28 140 -122 294 115 0 0 chr17 58363392 58363444 -31141109 + (CA)n Simple_repeat Simple_repeat 1 52 0 516 32 0 0 chr17 58363445 58363507 -31141046 + (TC)n Simple_repeat Simple_repeat 1 62 0 372 77 19 0 chr17 58364578 58364630 -31139923 - PMER1 DNA MER1_type -37 53 1 266 147 132 15 chr17 58365299 58365367 -31139186 - L1ME2 LINE L1 -11 6153 6078 436 269 102 11 chr17 58366279 58366465 -31138088 + L1MA6 LINE L1 6071 6273 -27 271 250 24 0 chr17 58366494 58366578 -31137975 + L1M4c LINE L1 1314 1399 -4985 226 325 16 32 chr17 58366780 58366906 -31137647 + GA-rich Low_complexity Low_complexity 4 127 0 815 207 75 88 chr17 58366909 58367051 -31137502 + AluJo SINE Alu 2 144 -158 576 0 0 0 chr17 58367051 58367115 -31137438 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 815 207 75 88 chr17 58367115 58367277 -31137276 + AluJo SINE Alu 144 302 0 235 123 88 88 chr17 58367346 58367403 -31137150 + tRNA-Thr-ACA tRNA tRNA 7 63 -13 27 29 0 0 chr17 58367493 58367527 -31137026 + AT_rich Low_complexity Low_complexity 1 34 0 249 33 0 0 chr17 58367751 58367781 -31136772 + (CA)n Simple_repeat Simple_repeat 1 30 0 330 224 31 20 chr17 58367886 58367984 -31136569 + L1M4c LINE L1 1595 1693 -4691 503 185 96 25 chr17 58368503 58368660 -31135893 - FRAM SINE Alu -10 166 1 21 36 0 0 chr17 58368764 58368792 -31135761 + AT_rich Low_complexity Low_complexity 1 28 0 289 160 0 0 chr17 58369130 58369180 -31135373 - PMER1 DNA MER1_type -37 53 4 699 35 0 0 chr17 58369187 58369273 -31135280 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 342 265 86 0 chr17 58369822 58369939 -31134614 + MLT1B LTR MaLR 3 129 -261 275 325 57 0 chr17 58369992 58370115 -31134438 + MLT1B LTR MaLR 285 414 -53 317 326 21 7 chr17 58370463 58370607 -31133946 + (CA)n Simple_repeat Simple_repeat 1 146 0 29 47 0 0 chr17 58372312 58372355 -31132198 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr17 58372740 58372772 -31131781 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 276 231 100 0 chr17 58372817 58372921 -31131632 - AluS SINE Alu -203 99 1 670 201 140 0 chr17 58372923 58373087 -31131466 - L1MA7 LINE L1 -420 5871 5685 253 209 45 0 chr17 58373239 58373306 -31131247 + FRAM/FAM SINE Alu 1 68 -98 183 281 232 12 chr17 58373366 58373448 -31131105 - MIR SINE MIR -62 200 101 325 265 40 53 chr17 58373510 58373661 -31130892 - L2 LINE L2 -198 3074 2926 263 292 15 0 chr17 58373832 58373897 -31130656 + polypyrimidine Low_complexity Low_complexity 1 66 0 244 273 0 0 chr17 58373906 58373961 -31130592 - tRNA-Ala-GCG tRNA tRNA -16 59 5 345 24 0 0 chr17 58374134 58374176 -31130377 + (CA)n Simple_repeat Simple_repeat 2 43 0 296 325 8 8 chr17 58374615 58374735 -31129818 - MER84-int LTR ERV1 -3086 1868 1749 305 323 89 0 chr17 58374994 58375152 -31129401 - MER84-int LTR ERV1 -3586 1368 1197 216 196 20 0 chr17 58375218 58375269 -31129284 + GA-rich Low_complexity Low_complexity 2 53 0 481 240 2 30 chr17 58376695 58376840 -31127713 - L1 LINE L1 -1433 4713 4570 323 292 155 15 chr17 58376860 58377124 -31127429 - L1 LINE L1 -1957 4189 3889 562 302 32 61 chr17 58377128 58377406 -31127147 - L1 LINE L1 -3085 3061 2792 329 217 43 87 chr17 58377414 58377575 -31126978 - L1 LINE L1 -3451 2695 2542 207 293 49 37 chr17 58378593 58378675 -31125878 + L2 LINE L2 3008 3090 -182 25 31 0 0 chr17 58382061 58382093 -31122460 + AT_rich Low_complexity Low_complexity 1 32 0 203 252 252 0 chr17 58383613 58383732 -31120821 + MIR SINE MIR 77 225 -37 252 143 0 0 chr17 58385854 58385896 -31118657 + (CCCCCA)n Simple_repeat Simple_repeat 6 47 0 273 156 156 0 chr17 58385902 58385966 -31118587 - AluS SINE Alu -204 99 26 203 150 33 50 chr17 58391039 58391099 -31113454 + T-rich Low_complexity Low_complexity 6 64 0 30 45 0 0 chr17 58391267 58391311 -31113242 + AT_rich Low_complexity Low_complexity 1 44 0 478 152 138 51 chr17 58392525 58392717 -31111836 - FRAM SINE Alu 0 203 1 236 268 0 12 chr17 58393741 58393823 -31110730 + T-rich Low_complexity Low_complexity 4 84 0 305 261 58 0 chr17 58394876 58394986 -31109567 - FLAM_C SINE Alu -27 106 2 357 229 85 85 chr17 58394986 58395139 -31109414 - L1M4 LINE L1 -3207 2939 2787 237 33 0 0 chr17 58398066 58398096 -31106457 + (CA)n Simple_repeat Simple_repeat 2 31 0 351 0 0 0 chr17 58399999 58400038 -31104515 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 495 0 0 0 chr17 58401062 58401117 -31103436 + (TTTTG)n Simple_repeat Simple_repeat 3 57 0 320 218 60 10 chr17 58401174 58401271 -31103282 - AluJ SINE Alu -92 210 119 195 288 82 14 chr17 58403919 58403992 -31100561 - MIR SINE MIR -165 97 20 216 0 0 0 chr17 58405491 58405515 -31099038 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 274 173 253 0 chr17 58406376 58406451 -31098102 + AluSg SINE Alu 10 103 -197 183 42 0 0 chr17 58406490 58406514 -31098039 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 435 83 0 0 chr17 58407238 58407298 -31097255 + (TG)n Simple_repeat Simple_repeat 1 60 0 261 0 0 0 chr17 58410717 58410746 -31093807 + (GA)n Simple_repeat Simple_repeat 2 30 0 378 0 0 0 chr17 58411591 58411633 -31092920 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr17 58412683 58412733 -31091820 + (CA)n Simple_repeat Simple_repeat 1 50 0 747 311 136 40 chr17 58413960 58414541 -31090012 + L1M2 LINE L1 1791 2427 -4422 621 250 23 21 chr17 58414694 58414954 -31089599 + L1MA4A LINE L1 5758 6018 -137 480 210 77 62 chr17 58417646 58417841 -31086712 - AluJ SINE Alu 0 312 115 21 95 0 0 chr17 58418312 58418375 -31086178 + AT_rich Low_complexity Low_complexity 1 63 0 240 208 0 0 chr17 58418625 58418673 -31085880 + (CA)n Simple_repeat Simple_repeat 1 48 0 341 188 96 21 chr17 58418910 58419015 -31085538 - AluJ SINE Alu -192 110 6 523 201 65 47 chr17 58420509 58420678 -31083875 + FRAM SINE Alu 1 171 -5 40 21 0 0 chr17 58421154 58421201 -31083352 + AT_rich Low_complexity Low_complexity 1 47 0 361 240 93 9 chr17 58421286 58421447 -31083106 + AluS SINE Alu 12 99 -203 606 63 0 0 chr17 58421558 58421637 -31082916 + (TA)n Simple_repeat Simple_repeat 1 79 0 509 195 83 35 chr17 58421702 58421871 -31082682 - AluJb SINE Alu 0 312 136 375 167 22 138 chr17 58422045 58422183 -31082370 - AluSq/x SINE Alu -170 132 11 843 285 89 55 chr17 58422869 58423417 -31081136 - L1MB7 LINE L1 -76 6344 5778 278 249 68 14 chr17 58423473 58423625 -31080928 - L1MB7 LINE L1 -744 5670 5530 331 214 96 79 chr17 58424488 58424666 -31079887 - AluSg SINE Alu -203 97 1 649 299 94 31 chr17 58424775 58425296 -31079257 - L1MB7 LINE L1 -1232 5150 4597 332 88 18 0 chr17 58425375 58425432 -31079121 + (TATG)n Simple_repeat Simple_repeat 4 61 0 445 273 96 43 chr17 58425657 58425939 -31078614 - L1MB7 LINE L1 -2192 4190 3894 318 228 99 10 chr17 58426051 58426152 -31078401 - AluJ SINE Alu -191 111 2 389 288 147 28 chr17 58426294 58426471 -31078082 - L1MB7 LINE L1 -3901 2483 2286 431 312 58 58 chr17 58426624 58426916 -31077637 - L1MB7 LINE L1 -4159 2225 1934 632 188 7 0 chr17 58427186 58427324 -31077229 + (CA)n Simple_repeat Simple_repeat 2 140 0 288 77 0 0 chr17 58427341 58427380 -31077173 + (ATTG)n Simple_repeat Simple_repeat 2 40 0 267 231 10 97 chr17 58427380 58427530 -31077023 + FLAM_C SINE Alu 10 132 -170 225 0 0 0 chr17 58428913 58428938 -31075615 + (TC)n Simple_repeat Simple_repeat 2 26 0 996 127 6 11 chr17 58428949 58429130 -31075423 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 270 163 0 20 chr17 58429447 58429496 -31075057 + L1MA6 LINE L1 6146 6193 -107 229 204 0 0 chr17 58430115 58430169 -31074384 + (TA)n Simple_repeat Simple_repeat 2 55 0 234 0 0 0 chr17 58430190 58430216 -31074337 + (TG)n Simple_repeat Simple_repeat 1 26 0 183 212 30 61 chr17 58432289 58432355 -31072198 + L2 LINE L2 362 425 -2889 387 0 0 0 chr17 58432401 58432444 -31072109 + (TC)n Simple_repeat Simple_repeat 2 44 0 532 255 205 11 chr17 58433754 58434068 -31070485 + L1M2 LINE L1 5270 5643 -660 400 262 48 0 chr17 58434413 58434539 -31070014 + L1M2 LINE L1 5641 5772 -528 384 22 0 0 chr17 58434639 58434684 -31069869 + (TCTCCC)n Simple_repeat Simple_repeat 3 47 0 961 237 114 0 chr17 58434991 58435324 -31069229 + L1MA4 LINE L1 4266 4636 -1510 1366 287 121 23 chr17 58435850 58437066 -31067487 + L1MA4 LINE L1 4590 5930 -370 207 0 0 0 chr17 58439871 58439894 -31064659 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 260 82 41 chr17 58440131 58440327 -31064226 + MLT1A2 LTR MaLR 171 374 0 279 0 0 0 chr17 58441722 58441753 -31062800 + (TCTCC)n Simple_repeat Simple_repeat 3 33 0 249 304 0 14 chr17 58441754 58441823 -31062730 + CT-rich Low_complexity Low_complexity 2 69 0 248 295 0 0 chr17 58442486 58442547 -31062006 + tRNA-Ala-GCG tRNA tRNA 1 61 -14 265 173 0 19 chr17 58443564 58443616 -31060937 - MLT1B LTR MaLR -45 345 295 264 59 0 0 chr17 58445894 58445928 -31058625 + (GA)n Simple_repeat Simple_repeat 2 35 0 186 71 0 0 chr17 58451678 58451706 -31052847 + (A)n Simple_repeat Simple_repeat 1 28 0 278 203 0 17 chr17 58453093 58453152 -31051401 + tRNA-Lys-AAA tRNA tRNA 6 63 -13 198 0 0 0 chr17 58453259 58453281 -31051272 + (A)n Simple_repeat Simple_repeat 1 22 0 252 143 0 0 chr17 58453317 58453359 -31051194 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 326 222 0 49 chr17 58453359 58453440 -31051113 - L1MC4 LINE L1 -1339 6703 6627 354 228 82 58 chr17 58459643 58459814 -31044739 + AluJb SINE Alu 128 302 0 202 267 0 0 chr17 58461432 58461492 -31043061 + (CA)n Simple_repeat Simple_repeat 1 60 0 602 203 12 20 chr17 58461903 58462161 -31042392 + CT-rich Low_complexity Low_complexity 1 255 0 258 95 0 0 chr17 58463479 58463521 -31041032 + (CA)n Simple_repeat Simple_repeat 1 42 0 304 313 96 9 chr17 58465354 58465469 -31039084 + Tigger3(Golem) DNA MER2_type 2898 3022 -7 192 77 0 0 chr17 58467132 58467158 -31037395 + (A)n Simple_repeat Simple_repeat 1 26 0 885 282 56 38 chr17 58467991 58468515 -31036038 + L1MB7 LINE L1 5455 5993 -191 25 0 0 0 chr17 58468719 58468744 -31035809 + AT_rich Low_complexity Low_complexity 1 25 0 199 194 0 90 chr17 58468827 58468894 -31035659 - MIR3 SINE MIR -142 66 6 516 215 93 0 chr17 58472727 58472834 -31031719 + FLAM_A SINE Alu 7 123 -19 531 222 85 23 chr17 58473915 58474091 -31030462 - AluJo SINE Alu -4 308 122 374 295 125 13 chr17 58474238 58474462 -31030091 - L1P5 LINE L1 -556 5600 5352 186 43 0 0 chr17 58474464 58474487 -31030066 + (TTC)n Simple_repeat Simple_repeat 2 24 0 610 179 81 0 chr17 58475330 58475453 -31029100 + FLAM_A SINE Alu 1 133 0 21 57 0 0 chr17 58476543 58476578 -31027975 + GC_rich Low_complexity Low_complexity 1 35 0 189 147 0 0 chr17 58476689 58476723 -31027830 + (CGGGG)n Simple_repeat Simple_repeat 5 38 0 360 164 68 0 chr17 58478038 58478111 -31026442 + FLAM_A SINE Alu 32 109 -24 253 186 34 0 chr17 58478168 58478227 -31026326 - MER2 DNA MER2_type -232 113 53 260 282 34 68 chr17 58478948 58479065 -31025488 - FLAM_A SINE Alu -19 114 2 227 139 0 0 chr17 58479820 58479856 -31024697 - MER46C DNA MER2_type -27 311 276 447 247 78 7 chr17 58479948 58480102 -31024451 - Tigger4(Zombi) DNA MER2_type -48 2683 2519 270 125 0 0 chr17 58484615 58484663 -31019890 + (A)n Simple_repeat Simple_repeat 1 48 0 298 284 11 19 chr17 58485612 58485720 -31018833 + FLAM_A SINE Alu 21 109 -24 278 236 0 36 chr17 58487795 58487905 -31016648 + T-rich Low_complexity Low_complexity 2 107 0 319 207 76 0 chr17 58488001 58488111 -31016442 + FLAM_A SINE Alu 12 104 -29 378 0 0 0 chr17 58488187 58488229 -31016324 + (CA)n Simple_repeat Simple_repeat 1 42 0 319 184 184 0 chr17 58488987 58489090 -31015463 - MLT1D LTR MaLR -308 197 76 278 264 88 11 chr17 58489164 58489255 -31015298 - AluS SINE Alu -203 100 3 189 0 0 0 chr17 58489257 58489278 -31015275 + (T)n Simple_repeat Simple_repeat 1 21 0 432 0 0 0 chr17 58489405 58489453 -31015100 + (TG)n Simple_repeat Simple_repeat 2 49 0 378 248 167 12 chr17 58489677 58489902 -31014651 - L1MA4 LINE L1 -265 5906 5689 353 22 22 0 chr17 58490889 58490935 -31013618 + (TAA)n Simple_repeat Simple_repeat 2 48 0 210 301 26 9 chr17 58491126 58491239 -31013314 + (TATATG)n Simple_repeat Simple_repeat 1 115 0 182 360 237 0 chr17 58493358 58493497 -31011056 + MER5A DNA MER1_type 4 175 -14 243 0 0 0 chr17 58494620 58494647 -31009906 + (CA)n Simple_repeat Simple_repeat 2 28 0 198 71 0 0 chr17 58495339 58495367 -31009186 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 473 301 160 18 chr17 58495736 58495955 -31008598 + L2 LINE L2 2721 2970 -344 264 296 82 0 chr17 58496543 58496641 -31007912 + AluSq/x SINE Alu 7 112 -191 23 0 0 0 chr17 58498670 58498693 -31005860 + AT_rich Low_complexity Low_complexity 1 23 0 228 273 102 0 chr17 58498735 58498823 -31005730 - FLAM_A SINE Alu -35 98 2 463 248 98 23 chr17 58499154 58499368 -31005185 + L1MCb LINE L1 933 1162 -4883 363 23 0 0 chr17 58501871 58501915 -31002638 + (CA)n Simple_repeat Simple_repeat 1 44 0 1415 33 0 16 chr17 58503136 58503318 -31001235 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 390 91 0 0 chr17 58503319 58503374 -31001179 + (TCC)n Simple_repeat Simple_repeat 3 57 0 180 0 0 0 chr17 58503375 58503395 -31001158 + (TG)n Simple_repeat Simple_repeat 1 20 0 328 260 110 45 chr17 58504326 58504480 -31000073 + AluSg/x SINE Alu 135 298 -4 201 227 107 80 chr17 58504975 58505050 -30999503 + MIR SINE MIR 6 82 -180 29 28 0 0 chr17 58505123 58505159 -30999394 + AT_rich Low_complexity Low_complexity 1 36 0 236 311 124 31 chr17 58505324 58505517 -30999036 - MIR SINE MIR -31 231 21 240 306 0 0 chr17 58506253 58506315 -30998238 + tRNA-Ala-GCG tRNA tRNA 1 62 -13 33 73 0 0 chr17 58506419 58506487 -30998066 + AT_rich Low_complexity Low_complexity 1 68 0 297 281 88 29 chr17 58506494 58506665 -30997888 - AluJb SINE Alu -2 300 120 302 292 100 15 chr17 58506680 58506810 -30997743 - L1MEd LINE L1 -5082 1037 897 22 35 0 0 chr17 58507085 58507114 -30997439 + AT_rich Low_complexity Low_complexity 1 29 0 201 233 50 50 chr17 58507197 58507257 -30997296 - MIR SINE MIR -197 65 6 219 173 0 0 chr17 58507276 58507328 -30997225 + T-rich Low_complexity Low_complexity 1 52 0 205 132 53 0 chr17 58507380 58507418 -30997135 + (CCCA)n Simple_repeat Simple_repeat 4 43 0 411 132 0 0 chr17 58507485 58507553 -30997000 + (CA)n Simple_repeat Simple_repeat 1 68 0 369 0 0 0 chr17 58508414 58508455 -30996098 + (CA)n Simple_repeat Simple_repeat 1 41 0 413 282 97 26 chr17 58509350 58509577 -30994976 - L1ME3A LINE L1 -294 5876 5634 187 286 79 0 chr17 58509910 58509973 -30994580 - L2 LINE L2 -503 2811 2744 315 200 78 12 chr17 58510141 58510245 -30994308 - AluS SINE Alu -204 99 2 406 271 7 71 chr17 58510486 58510641 -30993912 + MSTD LTR MaLR 235 379 -17 25 31 0 0 chr17 58510739 58510771 -30993782 + AT_rich Low_complexity Low_complexity 1 32 0 195 217 50 50 chr17 58510850 58510910 -30993643 - MIR SINE MIR -197 65 6 432 0 0 0 chr17 58512171 58512219 -30992334 + (CA)n Simple_repeat Simple_repeat 2 49 0 364 322 49 7 chr17 58512254 58512397 -30992156 + L2 LINE L2 2885 3033 -280 401 132 15 15 chr17 58514612 58514680 -30989873 - AluSp SINE Alu -117 196 129 318 162 66 63 chr17 58515358 58515488 -30989065 + AluS SINE Alu 21 95 -208 198 0 0 0 chr17 58516459 58516481 -30988072 + (CA)n Simple_repeat Simple_repeat 1 22 0 464 261 104 53 chr17 58516837 58517174 -30987379 + MER84-int LTR ERV1 1111 1464 -3490 352 349 60 21 chr17 58517264 58517548 -30987005 + MER84-int LTR ERV1 1588 1882 -3072 225 220 0 51 chr17 58517740 58517799 -30986754 - MER30 DNA MER1_type -52 178 123 403 251 206 36 chr17 58518320 58518543 -30986010 + MST-int LTR MaLR 1325 1585 -66 225 240 20 0 chr17 58519173 58519223 -30985330 + G-rich Low_complexity Low_complexity 2 52 0 303 360 48 7 chr17 58519950 58520097 -30984456 + L1MC5 LINE L1 7781 7933 -28 209 228 140 0 chr17 58520121 58520178 -30984375 + L3 LINE CR1 1159 1223 -354 514 225 44 60 chr17 58520979 58521161 -30983392 - LTR65 LTR ERV1 -176 493 315 25 31 0 0 chr17 58523365 58523397 -30981156 + AT_rich Low_complexity Low_complexity 1 32 0 228 200 50 50 chr17 58523480 58523540 -30981013 - MIR SINE MIR -197 65 6 256 164 57 172 chr17 58524437 58524559 -30979994 - AluSg SINE Alu -197 103 26 342 0 0 0 chr17 58524663 58524701 -30979852 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr17 58525353 58525376 -30979177 + AT_rich Low_complexity Low_complexity 1 23 0 352 210 150 10 chr17 58525599 58525699 -30978854 + FLAM_C SINE Alu 1 114 -19 210 37 0 0 chr17 58525942 58525969 -30978584 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr17 58527230 58527255 -30977298 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 230 152 0 0 chr17 58527326 58527359 -30977194 - Alu SINE Alu -135 168 136 233 188 21 0 chr17 58527759 58527807 -30976746 + Alu SINE Alu 145 193 -110 197 135 19 0 chr17 58527808 58527860 -30976693 + G-rich Low_complexity Low_complexity 1 53 0 623 67 11 0 chr17 58528693 58528707 -30975846 + (CACAG)n Simple_repeat Simple_repeat 1 104 0 623 67 11 0 chr17 58528707 58528796 -30975757 + (CACAG)n Simple_repeat Simple_repeat 3 92 0 1096 269 43 100 chr17 58529173 58529901 -30974652 - L1 LINE L1 -1944 4202 3517 3059 272 56 28 chr17 58531000 58532676 -30971877 - L1M2 LINE L1 -694 5606 3874 532 225 75 23 chr17 58532691 58532864 -30971689 - AluJ SINE Alu -14 298 117 1280 307 95 17 chr17 58532864 58533193 -30971360 - L1M2 LINE L1 -2972 3174 2872 216 0 0 0 chr17 58533193 58533217 -30971336 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1280 307 95 17 chr17 58533217 58533852 -30970701 - L1M2 LINE L1 -3274 2872 2134 566 268 80 20 chr17 58534537 58534616 -30969937 - L1M2 LINE L1 -727 5573 5500 279 0 0 0 chr17 58534616 58534647 -30969906 + (CA)n Simple_repeat Simple_repeat 1 31 0 566 268 80 20 chr17 58534647 58534869 -30969684 - L1M2 LINE L1 -800 5500 5254 280 286 0 0 chr17 58536672 58536742 -30967811 + MIR SINE MIR 33 102 -160 570 15 0 0 chr17 58537615 58537682 -30966871 + (TG)n Simple_repeat Simple_repeat 1 67 0 739 64 18 9 chr17 58539083 58539193 -30965360 + (GGAGA)n Simple_repeat Simple_repeat 2 112 0 183 80 0 0 chr17 58543009 58543034 -30961519 + (T)n Simple_repeat Simple_repeat 1 25 0 1775 252 15 9 chr17 58543701 58544166 -30960387 - L1MA4 LINE L1 -370 5930 5463 252 324 0 0 chr17 58544665 58544733 -30959820 + GA-rich Low_complexity Low_complexity 2 69 0 233 255 0 0 chr17 58545571 58545618 -30958935 + MER117 DNA MER1_type 102 148 -49 25 31 0 0 chr17 58549883 58549915 -30954638 + AT_rich Low_complexity Low_complexity 1 32 0 443 288 171 9 chr17 58549920 58550142 -30954411 + L1MA4A LINE L1 5634 5891 -412 235 244 26 77 chr17 58550285 58550363 -30954190 - MIR3 SINE MIR -134 74 1 257 306 90 9 chr17 58550989 58551100 -30953453 - MER67C LTR ERV1 -150 560 441 288 237 13 13 chr17 58551184 58551260 -30953293 + MLT1B LTR MaLR 86 161 -229 282 274 105 11 chr17 58551716 58551811 -30952742 - AluSq/x SINE Alu -198 105 2 22 0 0 0 chr17 58552147 58552169 -30952384 + AT_rich Low_complexity Low_complexity 1 22 0 280 309 99 0 chr17 58552759 58552840 -30951713 + AluSg SINE Alu 2 90 -210 356 210 0 0 chr17 58552915 58552977 -30951576 - AluJ SINE Alu -193 109 48 378 0 0 0 chr17 58555834 58555876 -30948677 + (TG)n Simple_repeat Simple_repeat 2 43 0 278 24 73 0 chr17 58556199 58556240 -30948313 + T-rich Low_complexity Low_complexity 3 46 0 258 219 202 53 chr17 58556401 58556515 -30948038 + FRAM SINE Alu 25 155 -11 375 259 69 60 chr17 58557632 58557786 -30946767 - FLAM_C SINE Alu -27 106 2 261 0 0 0 chr17 58557792 58557821 -30946732 + (CA)n Simple_repeat Simple_repeat 2 30 0 360 0 0 0 chr17 58558137 58558177 -30946376 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 306 0 0 0 chr17 58558228 58558262 -30946291 + (CA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr17 58558770 58558794 -30945759 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 247 195 73 61 chr17 58559170 58559252 -30945301 - MLT1B LTR MaLR -266 124 42 470 82 0 14 chr17 58559771 58559844 -30944709 + (TCCA)n Simple_repeat Simple_repeat 4 75 0 508 267 38 0 chr17 58559970 58560101 -30944452 - MER58B DNA MER1_type -9 332 197 216 0 0 0 chr17 58560403 58560427 -30944126 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 387 206 109 0 chr17 58560488 58560580 -30943973 - FLAM_C SINE Alu -27 106 5 216 0 0 0 chr17 58561274 58561298 -30943255 + (TTG)n Simple_repeat Simple_repeat 3 26 0 204 204 0 0 chr17 58561472 58561516 -30943037 + (CTG)n Simple_repeat Simple_repeat 2 45 0 186 43 0 0 chr17 58562129 58562152 -30942401 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 327 298 73 0 chr17 58563292 58563416 -30941137 - FLAM_A SINE Alu 0 133 1 338 279 91 45 chr17 58564577 58564731 -30939822 - L1MC/D LINE L1 -594 5739 5579 32 26 0 0 chr17 58565120 58565159 -30939394 + AT_rich Low_complexity Low_complexity 1 39 0 732 80 0 0 chr17 58565607 58565707 -30938846 + (GAA)n Simple_repeat Simple_repeat 3 102 0 351 205 73 17 chr17 58565874 58566064 -30938489 - AluSg SINE Alu -197 103 2 258 304 29 0 chr17 58566270 58566339 -30938214 + G-rich Low_complexity Low_complexity 2 72 0 246 111 0 0 chr17 58566339 58566375 -30938178 - L1MC/D LINE L1 -758 5586 5551 192 342 72 9 chr17 58566647 58566758 -30937795 - MIR SINE MIR -33 229 112 327 49 0 0 chr17 58567035 58567076 -30937477 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 337 243 21 116 chr17 58667082 58667271 -30837282 - L1M4 LINE L1 -2347 3799 3629 1387 227 106 44 chr17 58667396 58667915 -30836638 - L1ME LINE L1 -357 5805 5255 29 84 0 0 chr17 58668029 58668100 -30836453 + AT_rich Low_complexity Low_complexity 1 71 0 450 259 117 131 chr17 58668121 58668678 -30835875 + MLT1H LTR MaLR 1 549 0 8759 225 61 14 chr17 58668931 58670889 -30833664 + L1M2 LINE L1 173 2222 -4627 691 243 0 7 chr17 58671047 58671191 -30833362 - AluJb SINE Alu -7 305 163 2461 143 42 0 chr17 58671191 58671577 -30832976 - LTR3 LTR ERVK -25 407 6 961 181 19 0 chr17 58671577 58671737 -30832816 - AluJb SINE Alu -149 163 1 332 202 11 56 chr17 58672516 58672605 -30831948 + L2 LINE L2 3182 3266 -47 23 0 0 0 chr17 58672655 58672678 -30831875 + AT_rich Low_complexity Low_complexity 1 23 0 1973 241 52 34 chr17 58673390 58674005 -30830548 - MLT1E2 LTR MaLR 0 626 1 1139 78 0 0 chr17 58674289 58674431 -30830122 + AluY SINE Alu 163 304 -7 195 381 106 21 chr17 58675386 58675622 -30828931 + L2 LINE L2 2967 3222 -50 25 75 0 0 chr17 58675717 58675770 -30828783 + AT_rich Low_complexity Low_complexity 1 53 0 1168 239 51 62 chr17 58676196 58676665 -30827888 - MLT2C2 LTR ERVL 0 464 1 2405 69 7 10 chr17 58676764 58677067 -30827486 - AluY SINE Alu -9 302 1 257 220 0 0 chr17 58677818 58677868 -30826685 - HsTC2 DNA Tc2 -1025 873 824 276 100 0 0 chr17 58678427 58678467 -30826086 + (CA)n Simple_repeat Simple_repeat 1 40 0 2097 112 0 0 chr17 58679439 58679751 -30824802 - AluSx SINE Alu 0 312 1 1048 261 128 57 chr17 58679752 58680291 -30824262 + MLT1F1 LTR MaLR 5 565 -2 216 0 0 0 chr17 58681569 58681593 -30822960 + (A)n Simple_repeat Simple_repeat 1 24 0 721 210 92 36 chr17 58683873 58684068 -30820485 + MER3 DNA MER1_type 1 206 -3 384 97 0 0 chr17 58684259 58684321 -30820232 + (CA)n Simple_repeat Simple_repeat 2 63 0 457 316 44 13 chr17 58684667 58684825 -30819728 + MIR SINE MIR 36 198 -64 560 333 65 17 chr17 58685417 58685648 -30818905 - MIR SINE MIR -10 252 11 371 262 19 9 chr17 58686584 58686691 -30817862 - L1MEc LINE L1 -6122 274 167 913 242 27 9 chr17 58686770 58686989 -30817564 + MLT1D LTR MaLR 3 225 -280 730 230 56 0 chr17 58686994 58687190 -30817363 + L1ME1 LINE L1 5042 5248 -898 424 259 35 17 chr17 58687173 58687289 -30817264 + L1ME1 LINE L1 5894 6011 -155 * 422 208 21 10 chr17 58687302 58687407 -30817146 + L1ME1 LINE L1 6054 6159 -5 1955 173 47 32 chr17 58687412 58687937 -30816616 - MLT2A2 LTR ERVL -19 535 2 22 0 0 0 chr17 58688089 58688111 -30816442 + AT_rich Low_complexity Low_complexity 1 22 0 850 316 83 51 chr17 58688425 58688953 -30815600 - L2 LINE L2 -224 3089 2523 2898 136 107 37 chr17 58688953 58689525 -30815028 + LTR9 LTR ERV1 1 612 0 850 316 83 51 chr17 58689525 58689737 -30814816 - L2 LINE L2 -790 2523 2319 7433 178 52 7 chr17 58689767 58691479 -30813074 + L1M2 LINE L1 3817 5603 -688 318 275 16 49 chr17 58691711 58691955 -30812598 + HAL1b LINE L1 187 422 -926 406 368 9 32 chr17 58691977 58692197 -30812356 - HAL1 LINE L1 -780 1727 1513 309 332 83 18 chr17 58692313 58692590 -30811963 - L1MEd LINE L1 -4885 1234 940 1446 184 81 3 chr17 58692590 58692910 -30811643 - L1MA9 LINE L1 0 6312 5968 1237 114 39 5 chr17 58692907 58693154 -30811399 + L1MA7 LINE L1 5226 5483 -748 * 1050 178 0 0 chr17 58693208 58693393 -30811160 + L1MA7 LINE L1 5794 5978 -313 309 291 103 30 chr17 58693449 58693652 -30810901 - HAL1 LINE L1 -1473 1034 817 2234 224 27 63 chr17 58694372 58695119 -30809434 + L1MC4a LINE L1 5434 6153 -1655 1347 92 85 68 chr17 58695338 58695504 -30809049 + L1MA8 LINE L1 6003 6178 -113 2221 79 35 0 chr17 58695504 58695624 -30808929 + AluY SINE Alu 1 115 -196 261 0 0 0 chr17 58695624 58695653 -30808900 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2221 79 35 0 chr17 58695653 58695822 -30808731 + AluY SINE Alu 115 300 -11 1347 92 85 68 chr17 58695822 58695936 -30808617 + L1MA8 LINE L1 6178 6288 -3 2197 127 33 30 chr17 58696093 58696456 -30808097 + THE1B LTR MaLR 1 364 0 2045 167 37 20 chr17 58698105 58698507 -30806046 + L1PA16 LINE L1 5742 6150 -16 1585 163 14 38 chr17 58698799 58699109 -30805444 + AluJb SINE Alu 1 303 0 269 254 45 18 chr17 58699515 58699625 -30804928 - MER103 DNA DNA -13 153 41 603 307 67 27 chr17 58699631 58699856 -30804697 + MIR SINE MIR 3 236 -26 231 295 39 62 chr17 58699948 58699959 -30804594 - MIR3 SINE MIR -53 155 145 2089 131 0 0 chr17 58699959 58700249 -30804304 - AluSx SINE Alu -22 290 1 231 295 39 62 chr17 58700249 58700366 -30804187 - MIR3 SINE MIR -63 145 30 189 0 0 0 chr17 58701331 58701352 -30803201 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 14157 169 29 26 chr17 58701398 58702474 -30802079 + L1MA3 LINE L1 11 1082 -6483 2058 126 20 7 chr17 58702474 58702768 -30801785 + AluSx SINE Alu 1 298 -14 14157 169 29 26 chr17 58702768 58704245 -30800308 + L1MA3 LINE L1 1082 2576 -4989 2203 102 0 0 chr17 58704245 58704530 -30800023 + AluSg SINE Alu 1 285 -25 14157 169 29 26 chr17 58704530 58704591 -30799962 + L1MA3 LINE L1 2576 2635 -4930 6386 150 8 9 chr17 58704586 58705835 -30798718 + L1MA3 LINE L1 6308 7556 -168 * 1749 150 0 4 chr17 58705835 58706095 -30798458 + AluSx SINE Alu 36 294 -18 6386 150 8 9 chr17 58706095 58706253 -30798300 + L1MA3 LINE L1 7556 7713 -11 236 250 78 16 chr17 58706765 58706829 -30797724 - L2 LINE L2 -1 3271 3204 22 35 0 0 chr17 58707627 58707656 -30796897 + AT_rich Low_complexity Low_complexity 1 29 0 1052 226 129 81 chr17 58708330 58708812 -30795741 - MLT1D LTR MaLR 0 505 1 2299 176 16 19 chr17 58712762 58713189 -30791364 - MSTB LTR MaLR 0 426 1 620 205 224 13 chr17 58714170 58714326 -30790227 - MER5A DNA MER1_type 0 189 1 817 31 0 0 chr17 58715257 58715385 -30789168 - AluY SINE Alu 0 316 189 26 93 0 0 chr17 58716791 58716866 -30787687 + AT_rich Low_complexity Low_complexity 1 75 0 230 261 22 65 chr17 58716946 58717038 -30787515 + MIR3 SINE MIR 115 202 -6 192 336 61 46 chr17 58717179 58717310 -30787243 - MIR SINE MIR -73 189 57 1077 180 25 0 chr17 58717431 58717631 -30786922 - MER2 DNA MER2_type -139 206 2 23 0 0 0 chr17 58718023 58718046 -30786507 + AT_rich Low_complexity Low_complexity 1 23 0 437 150 12 12 chr17 58718664 58718744 -30785809 + MADE1 DNA Mariner 1 80 0 423 314 52 5 chr17 58718873 58719064 -30785489 + MLT1L LTR MaLR 383 582 -33 240 35 0 0 chr17 58719423 58719452 -30785101 + (TTA)n Simple_repeat Simple_repeat 1 29 0 270 212 30 0 chr17 58719452 58719518 -30785035 + GA-rich Low_complexity Low_complexity 1 68 0 448 198 22 11 chr17 58720233 58720324 -30784229 - Tigger5 DNA MER2_type 0 2323 2232 * 693 226 0 0 chr17 58720318 58720451 -30784102 - Tigger5 DNA MER2_type -2190 133 1 305 288 260 32 chr17 58720837 58721056 -30783497 + L2 LINE L2 3003 3171 -142 2507 110 14 14 chr17 58721056 58721420 -30783133 - THE1B LTR MaLR 0 364 1 10490 108 14 29 chr17 58721420 58723024 -30781529 - THE1B-int LTR MaLR 0 1580 1 2641 104 3 6 chr17 58723024 58723389 -30781164 - THE1B LTR MaLR 0 364 1 305 288 260 32 chr17 58723389 58723417 -30781136 + L2 LINE L2 3170 3309 -4 268 116 58 29 chr17 58723644 58723713 -30780840 - HAL1 LINE L1 -154 2353 2283 206 62 31 0 chr17 58723994 58724026 -30780527 + (TA)n Simple_repeat Simple_repeat 1 33 0 1574 181 30 73 chr17 58724555 58724954 -30779599 + L1MA4A LINE L1 2277 2658 -4191 4209 80 35 7 chr17 58727693 58728663 -30775890 - MER11A LTR ERVK 0 1266 129 1723 173 0 20 chr17 58729058 58729353 -30775200 + AluJo SINE Alu 1 289 -23 229 213 62 50 chr17 58729397 58729477 -30775076 + MER67C LTR ERV1 52 132 -578 1223 117 37 0 chr17 58729486 58729674 -30774879 - AluSp SINE Alu -7 306 112 518 214 19 0 chr17 58729674 58729777 -30774776 + MER67C LTR ERV1 165 269 -441 2119 223 24 0 chr17 58729801 58730222 -30774331 + LTR24 LTR ERV1 7 437 -30 1006 136 9 28 chr17 58730234 58730447 -30774106 + L1MA4A LINE L1 2644 2852 -3997 * 5844 176 17 13 chr17 58730445 58732465 -30772088 + L1MA4A LINE L1 4959 6993 -12 36 0 0 0 chr17 58732666 58732702 -30771851 + AT_rich Low_complexity Low_complexity 1 36 0 255 333 42 0 chr17 58732703 58732847 -30771706 + L1MC4a LINE L1 5777 5926 -1882 369 300 54 45 chr17 58733399 58733648 -30770905 + L1ME4a LINE L1 5353 5602 -537 248 308 11 0 chr17 58733633 58733724 -30770829 + L1ME4a LINE L1 5963 6054 -67 * 26 0 0 0 chr17 58733726 58733752 -30770801 + AT_rich Low_complexity Low_complexity 1 26 0 2372 94 3 3 chr17 58735096 58735426 -30769127 - L1PA8 LINE L1 0 6172 5843 208 376 97 18 chr17 58735441 58735606 -30768947 + L2 LINE L2 2828 3005 -308 28 0 0 0 chr17 58735618 58735646 -30768907 + AT_rich Low_complexity Low_complexity 1 28 0 192 250 44 29 chr17 58735803 58735871 -30768682 - MIR3 SINE MIR -4 204 136 1732 169 9 36 chr17 58736461 58736792 -30767761 - MLT1B LTR MaLR -66 324 3 202 300 0 0 chr17 58736793 58736843 -30767710 + L2 LINE L2 3196 3245 -27 1898 117 84 0 chr17 58737186 58737460 -30767093 + AluSg SINE Alu 1 297 -13 2691 252 38 18 chr17 58738285 58738958 -30765595 - L1MD2 LINE L1 -227 6132 5426 2033 128 3 0 chr17 58738958 58739280 -30765273 - AluSp SINE Alu 0 323 1 2691 252 38 18 chr17 58739280 58739586 -30764967 - L1MD2 LINE L1 -933 5426 5128 1627 264 31 32 chr17 58739622 58740208 -30764345 - L1MD2 LINE L1 -1511 4635 4051 2125 96 4 7 chr17 58740278 58740580 -30763973 - AluSx SINE Alu 0 306 6 191 321 139 36 chr17 58742662 58742799 -30761754 + MER5B DNA MER1_type 21 171 -7 21 0 0 0 chr17 58743072 58743093 -30761460 + AT_rich Low_complexity Low_complexity 1 21 0 258 228 29 37 chr17 58743971 58744089 -30760464 + L1ME4a LINE L1 1153 6028 -82 29 47 0 0 chr17 58744135 58744178 -30760375 + AT_rich Low_complexity Low_complexity 1 43 0 2247 73 0 14 chr17 58744510 58744827 -30759726 + AluY SINE Alu 1 313 0 23 33 0 0 chr17 58745129 58745159 -30759394 + AT_rich Low_complexity Low_complexity 1 30 0 230 387 8 32 chr17 58745190 58745314 -30759239 + MIR SINE MIR 40 160 -102 297 255 41 20 chr17 58745348 58745446 -30759107 + MIR3 SINE MIR 61 160 -48 231 239 109 43 chr17 58746754 58746846 -30757707 - L2 LINE L2 -508 2806 2709 2097 96 0 0 chr17 58747760 58748030 -30756523 - AluSg SINE Alu -7 303 34 440 348 43 11 chr17 58748142 58748326 -30756227 - MIR SINE MIR -57 205 16 1857 166 30 0 chr17 58748670 58749019 -30755534 + AluSx SINE Alu 2 359 0 331 281 45 73 chr17 58749131 58749195 -30755358 + L1ME1 LINE L1 5599 5663 -503 2326 60 0 0 chr17 58749195 58749524 -30755029 - AluY SINE Alu 0 329 1 331 281 45 73 chr17 58749524 58749812 -30754741 + L1ME1 LINE L1 5663 5942 -224 6319 109 41 15 chr17 58750044 58750153 -30754400 - L1MA3 LINE L1 0 6305 6200 1838 141 147 11 chr17 58750153 58750528 -30754025 - MSTA LTR MaLR 0 428 3 6319 109 41 15 chr17 58750528 58751443 -30753110 - L1MA3 LINE L1 -105 6200 5254 3731 223 8 27 chr17 58751444 58752183 -30752370 - L1M1 LINE L1 -5918 1647 923 568 144 21 10 chr17 58752245 58752342 -30752211 + MER4A LTR ERV1 1 98 -566 1556 174 9 32 chr17 58752342 58752721 -30751832 + MER4A LTR ERV1 261 664 0 2020 148 23 0 chr17 58753682 58753987 -30750566 - AluSx SINE Alu 0 312 1 232 165 24 59 chr17 58755716 58755801 -30748752 - L1MC5 LINE L1 -49 7912 7831 414 307 67 6 chr17 58755825 58756004 -30748549 - MIR SINE MIR -52 210 21 520 243 173 22 chr17 58756060 58756245 -30748308 - LTR33 LTR ERVL 0 521 309 533 264 114 12 chr17 58756341 58756508 -30748045 - LTR33 LTR ERVL -337 184 1 2535 136 82 13 chr17 58756843 58757321 -30747232 - MER9 LTR ERVK 0 511 1 272 333 44 31 chr17 58757414 58757573 -30746980 + MER5B DNA MER1_type 11 171 -7 439 245 7 86 chr17 58757663 58757802 -30746751 + L2 LINE L2 3186 3313 0 248 0 31 0 chr17 58757904 58757936 -30746617 + (TA)n Simple_repeat Simple_repeat 1 33 0 994 188 32 4 chr17 58758150 58758471 -30746082 - MLT1A1 LTR MaLR -10 355 1 870 239 64 30 chr17 58758990 58759254 -30745299 + L1MB8 LINE L1 5900 6172 -6 426 275 78 20 chr17 58759503 58759663 -30744890 - MIR SINE MIR -60 148 27 427 383 11 6 chr17 58760247 58760427 -30744126 - MIR3 SINE MIR -12 196 16 258 241 0 0 chr17 58760898 58760956 -30743597 - MLT2F LTR ERVL 0 663 606 2415 237 16 18 chr17 58760959 58761532 -30743021 - MER21B-int LTR ERV1 -729 3462 2891 351 264 0 0 chr17 58761550 58761641 -30742912 - MER21B-int LTR ERV1 -3633 558 468 * 5643 216 23 17 chr17 58761637 58762848 -30741705 - MER21B-int LTR ERV1 -1297 2894 1677 761 244 0 0 chr17 58762919 58763079 -30741474 - MER21B-int LTR ERV1 -2394 1797 1638 6965 239 20 32 chr17 58763156 58764812 -30739741 - MER21B-int LTR ERV1 -2554 1637 2 3035 238 25 37 chr17 58764829 58765649 -30738904 - MER21B LTR ERV1 -20 911 12 183 186 0 0 chr17 58765676 58765719 -30738834 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 1126 273 55 11 chr17 58765753 58766191 -30738362 + MER90 LTR ERV1 22 548 -66 564 181 14 9 chr17 58766234 58766464 -30738089 + (TA)n Simple_repeat Simple_repeat 1 231 0 719 217 12 24 chr17 58766507 58766673 -30737880 - MLT2F LTR ERVL -60 603 440 5954 182 28 17 chr17 58766673 58767906 -30736647 + L1MC3 LINE L1 6538 7784 -1 917 271 39 15 chr17 58767909 58768311 -30736242 - MLT2F LTR ERVL -206 457 1 304 266 13 25 chr17 58768982 58769061 -30735492 + L2 LINE L2 3186 3263 -9 1557 303 112 16 chr17 58769207 58769835 -30734718 + L2 LINE L2 2207 2894 -420 249 293 24 78 chr17 58769825 58769992 -30734561 + MIR SINE MIR 105 262 0 * 610 250 60 104 chr17 58771120 58771203 -30733350 - HAL1 LINE L1 -861 1646 1561 1891 143 39 0 chr17 58771203 58771489 -30733064 - AluSx SINE Alu -15 297 1 610 250 60 104 chr17 58771489 58772001 -30732552 - HAL1 LINE L1 -946 1561 1077 553 321 88 70 chr17 58772008 58772677 -30731876 - HAL1 LINE L1 -1576 931 251 411 298 105 45 chr17 58773196 58773549 -30731004 + MLT1L LTR MaLR 15 388 -227 2040 106 0 7 chr17 58774654 58774961 -30729592 + AluSx SINE Alu 1 305 0 277 239 14 28 chr17 58775430 58775501 -30729052 - L2 LINE L2 -15 3298 3229 1109 218 66 17 chr17 58775806 58775868 -30728685 + MER67D LTR ERV1 21 79 -435 216 0 0 0 chr17 58775868 58775892 -30728661 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 1109 218 66 17 chr17 58775892 58776118 -30728435 + MER67D LTR ERV1 79 323 -191 2385 76 3 0 chr17 58776118 58776422 -30728131 - AluY SINE Alu -6 305 1 204 206 48 16 chr17 58777128 58777191 -30727362 + CT-rich Low_complexity Low_complexity 1 65 0 2108 263 112 60 chr17 58777358 58778728 -30725825 + L1MC4 LINE L1 6461 7902 -140 387 363 16 8 chr17 58781373 58781497 -30723056 - L2 LINE L2 -5 3267 3143 743 280 131 49 chr17 58781679 58782128 -30722425 - MLT1H LTR MaLR 0 549 22 192 323 31 0 chr17 58782592 58782657 -30721896 + L2 LINE L2 3169 3235 -78 215 298 156 50 chr17 58783422 58783594 -30720959 + MIR SINE MIR 29 212 -50 476 221 15 44 chr17 58783712 58783848 -30720705 + MIR3 SINE MIR 71 202 -6 1513 197 10 23 chr17 58783848 58784157 -30720396 - AluJo SINE Alu -7 305 1 246 355 13 0 chr17 58784358 58784434 -30720119 + L2 LINE L2 2730 2806 -508 1562 251 156 18 chr17 58784455 58784954 -30719599 + MLT1G LTR MaLR 1 568 -22 397 332 138 24 chr17 58784979 58785355 -30719198 + L2 LINE L2 2839 3257 -56 311 43 0 22 chr17 58785522 58785568 -30718985 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 34536 111 19 10 chr17 58785568 58791631 -30712922 - L1PA6 LINE L1 -24 6130 11 201 191 0 24 chr17 58792075 58792117 -30712436 + (TATATG)n Simple_repeat Simple_repeat 4 44 0 2948 172 25 28 chr17 58792117 58792729 -30711824 - L1MC2 LINE L1 -54 6290 5681 2365 154 26 7 chr17 58792928 58793343 -30711210 + Tigger1 DNA MER2_type 26 448 -1970 * 9524 132 44 70 chr17 58793326 58794762 -30709791 + Tigger1 DNA MER2_type 610 2082 -336 2228 116 16 0 chr17 58794762 58795065 -30709488 + AluSx SINE Alu 1 308 -4 9524 132 44 70 chr17 58795065 58795139 -30709414 + Tigger1 DNA MER2_type 2082 2156 -262 294 29 0 0 chr17 58795139 58795174 -30709379 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 9524 132 44 70 chr17 58795174 58795519 -30709034 + Tigger1 DNA MER2_type 2156 2418 0 193 195 6 40 chr17 58795937 58795991 -30708562 + MIR SINE MIR 32 103 -105 266 352 42 21 chr17 58796208 58796350 -30708203 - MIR3 SINE MIR -1 207 63 207 0 0 0 chr17 58797234 58797257 -30707296 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 744 239 96 22 chr17 58797420 58797776 -30706777 - L1ME LINE L1 -3985 2411 2030 543 261 109 35 chr17 58798016 58798408 -30706145 - L1ME LINE L1 -4453 1943 1468 343 300 88 20 chr17 58798556 58799046 -30705507 - L1ME LINE L1 -4918 1478 917 216 0 0 0 chr17 58799077 58799101 -30705452 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3263 157 7 28 chr17 58799101 58799613 -30704940 - L1PA16 LINE L1 -12 6154 5655 2385 161 24 5 chr17 58799613 58800030 -30704523 - MSTA LTR MaLR -3 425 1 3263 157 7 28 chr17 58800030 58800124 -30704429 - L1PA16 LINE L1 -511 5655 5561 2739 99 3 5 chr17 58800124 58800508 -30704045 - THE1C-int LTR MaLR -1197 383 1 2635 120 0 3 chr17 58800508 58800884 -30703669 - THE1C LTR MaLR 0 375 1 457 331 69 18 chr17 58800935 58801267 -30703286 - L1ME LINE L1 -5993 403 55 22 0 0 0 chr17 58801433 58801455 -30703098 + AT_rich Low_complexity Low_complexity 1 22 0 431 69 0 208 chr17 58802119 58802220 -30702333 - MADE1 DNA Mariner 0 80 1 2101 129 3 0 chr17 58802460 58802754 -30701799 - AluSg SINE Alu -15 295 1 533 249 143 53 chr17 58802917 58803126 -30701427 + MIR SINE MIR 31 258 -4 453 302 134 71 chr17 58803249 58803712 -30700841 + L2 LINE L2 1869 2360 -954 35265 107 14 8 chr17 58803725 58809826 -30694727 + L1PA6 LINE L1 11 6149 -5 189 338 83 15 chr17 58810237 58810370 -30694183 + L2 LINE L2 2813 2954 -318 351 0 0 0 chr17 58810382 58810421 -30694132 + (TG)n Simple_repeat Simple_repeat 2 40 0 778 292 46 21 chr17 58810468 58810752 -30693801 - LTR16C LTR ERVL -35 456 166 455 270 22 15 chr17 58812099 58812236 -30692317 - MIR SINE MIR -120 142 5 1834 150 7 14 chr17 58812420 58812733 -30691820 + AluSx SINE Alu 2 312 0 693 270 67 56 chr17 58813342 58813880 -30690673 - LTR48 LTR ERV1 0 787 1 542 280 38 0 chr17 58813895 58814052 -30690501 - MIR SINE MIR -21 241 79 271 250 139 0 chr17 58814270 58814342 -30690211 + L2 LINE L2 3232 3313 0 296 353 77 74 chr17 58814387 58814738 -30689815 - L2 LINE L2 -85 3187 2836 1617 210 115 8 chr17 58815363 58815754 -30688799 + MER67D LTR ERV1 1 433 -81 614 236 9 84 chr17 58815956 58816181 -30688372 - L2 LINE L2 0 3313 3106 3536 280 77 22 chr17 58816196 58817616 -30686937 - L2 LINE L2 -536 2778 1282 460 391 24 0 chr17 58817648 58817855 -30686698 - MIR SINE MIR -42 220 9 22 0 0 0 chr17 58817898 58817920 -30686633 + AT_rich Low_complexity Low_complexity 1 22 0 268 303 62 28 chr17 58818237 58818382 -30686171 - MLT1L LTR MaLR 0 615 466 235 312 54 65 chr17 58818412 58818598 -30685955 - MLT1L LTR MaLR -221 394 211 276 314 55 51 chr17 58818723 58818959 -30685594 - L3 LINE CR1 -673 904 668 2015 121 0 0 chr17 58819313 58819586 -30684967 - AluSx SINE Alu -14 298 26 1051 110 21 0 chr17 58819686 58819831 -30684722 + AluSg/x SINE Alu 148 295 -17 937 291 63 58 chr17 58819860 58820481 -30684072 + L1PA16 LINE L1 788 1411 -6163 245 364 0 0 chr17 58820564 58820663 -30683890 + L1PA16 LINE L1 2084 2182 -5399 11205 225 98 9 chr17 58820953 58825774 -30678779 + L1PA16 LINE L1 2243 7499 -105 247 246 0 0 chr17 58825775 58825836 -30678717 + L1PA16 LINE L1 7536 7596 -8 514 279 68 47 chr17 58825845 58826035 -30678518 - MIR SINE MIR -62 200 7 1932 181 47 18 chr17 58826062 58826443 -30678110 - MSTD LTR MaLR -4 392 1 256 336 189 0 chr17 58826770 58826913 -30677640 + MIR SINE MIR 23 192 -70 314 351 36 65 chr17 58827272 58827520 -30677033 - L2 LINE L2 -816 2498 2258 1039 256 62 54 chr17 58827538 58828039 -30676514 + MLT1D LTR MaLR 1 505 0 1254 194 148 4 chr17 58828373 58828636 -30675917 + AluJb SINE Alu 1 301 -1 236 175 35 0 chr17 58828636 58828693 -30675860 + G-rich Low_complexity Low_complexity 3 61 0 2267 107 0 0 chr17 58828968 58829266 -30675287 + AluSc SINE Alu 1 298 -11 249 128 0 0 chr17 58829283 58829330 -30675223 - MER57A LTR ERV1 -23 380 334 8357 122 17 7 chr17 58829987 58831262 -30673291 + HSMAR2 DNA Mariner 2 1289 -13 2065 154 0 3 chr17 58831263 58831574 -30672979 - AluSx SINE Alu -2 310 1 424 341 22 14 chr17 58832838 58832976 -30671577 + MIR3 SINE MIR 58 196 -12 24 0 0 0 chr17 58832990 58833014 -30671539 + AT_rich Low_complexity Low_complexity 1 24 0 629 291 136 67 chr17 58833082 58833677 -30670876 + HAL1 LINE L1 1737 2372 -135 23 33 0 0 chr17 58834129 58834159 -30670394 + AT_rich Low_complexity Low_complexity 1 30 0 204 204 19 19 chr17 58834240 58834294 -30670259 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 275 331 50 25 chr17 58835087 58835208 -30669345 + L2 LINE L2 3144 3267 -5 22 35 0 0 chr17 58835754 58835783 -30668770 + AT_rich Low_complexity Low_complexity 1 29 0 192 259 103 0 chr17 58835811 58835869 -30668684 - L2 LINE L2 0 3272 3209 609 184 37 31 chr17 58836023 58836048 -30668505 - L1MA10 LINE L1 -2 6332 6308 2266 236 63 60 chr17 58836048 58836187 -30668366 - L1ME1 LINE L1 -15 6220 6083 435 148 0 12 chr17 58836187 58836268 -30668285 - MADE1 DNA Mariner 0 80 1 2266 236 63 60 chr17 58836268 58837769 -30666784 - L1ME1 LINE L1 -152 6083 4587 2218 251 87 38 chr17 58837771 58837900 -30666653 - L1ME1 LINE L1 -2289 3926 3805 2303 105 3 6 chr17 58837900 58838214 -30666339 + AluSq SINE Alu 1 313 0 2218 251 87 38 chr17 58838214 58839232 -30665321 - L1ME1 LINE L1 -2410 3805 2723 1919 239 63 40 chr17 58839248 58839976 -30664577 - L1ME1 LINE L1 -5227 1169 425 444 277 20 7 chr17 58840133 58840281 -30664272 - L1ME1 LINE L1 -6202 194 45 2064 135 3 0 chr17 58840709 58841038 -30663515 + AluSq SINE Alu 1 313 0 227 296 113 0 chr17 58841702 58841773 -30662780 + L3 LINE CR1 1310 1388 -189 2057 123 0 13 chr17 58843332 58843648 -30660905 - AluSx SINE Alu 0 312 1 5055 50 6 23 chr17 58843656 58844314 -30660239 - L1PA6 LINE L1 -1 6153 5507 4548 115 40 32 chr17 58844314 58845415 -30659138 + MER11A LTR ERVK 1 1071 0 35569 101 17 12 chr17 58845415 58849407 -30655146 - L1P2 LINE L1 -642 5512 1481 2376 93 0 0 chr17 58849407 58849708 -30654845 - AluY SINE Alu -10 301 1 35569 101 17 12 chr17 58849708 58851187 -30653366 - L1P2 LINE L1 -4673 1481 11 889 217 31 12 chr17 58851455 58851713 -30652840 - LTR37B LTR ERV1 -8 460 198 726 180 113 13 chr17 58852015 58852165 -30652388 + FRAM SINE Alu 1 165 -1 1813 138 3 47 chr17 58852521 58852860 -30651693 - AluSx SINE Alu 0 326 1 23 54 0 0 chr17 58852978 58853015 -30651538 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr17 58853083 58853104 -30651449 + AT_rich Low_complexity Low_complexity 1 21 0 322 318 66 40 chr17 58853163 58853361 -30651192 - L1ME LINE L1 -428 5693 5491 423 303 0 56 chr17 58853481 58853659 -30650894 + LTR33 LTR ERVL 6 173 -348 1320 248 70 31 chr17 58853751 58854167 -30650386 + LTR16A1 LTR ERVL 26 457 0 1434 309 98 84 chr17 58854167 58856087 -30648466 + HERV16 LTR ERVL 1 1947 -3049 291 28 0 0 chr17 58856244 58856280 -30648273 + (TG)n Simple_repeat Simple_repeat 2 37 0 1525 199 3 33 chr17 58856282 58856583 -30647970 - AluJo SINE Alu -20 292 1 645 37 66 40 chr17 58856592 58857120 -30647433 + (TA)n Simple_repeat Simple_repeat 1 541 0 1218 126 16 37 chr17 58857137 58857328 -30647225 - AluSq SINE Alu -126 187 1 235 200 153 0 chr17 58857373 58857458 -30647095 + L1MC4a LINE L1 6194 6291 -1517 1156 217 83 53 chr17 58857475 58858003 -30646550 + L1MC4 LINE L1 7308 7973 -22 1000 291 43 15 chr17 58860053 58860445 -30644108 + L2 LINE L2 2107 2509 -805 1639 247 63 2 chr17 58860483 58860960 -30643593 + L1MC4a LINE L1 7095 7600 -208 22 0 0 0 chr17 58861754 58861776 -30642777 + AT_rich Low_complexity Low_complexity 1 22 0 560 204 0 0 chr17 58862368 58862466 -30642087 + AluJb SINE Alu 191 288 -24 232 254 142 68 chr17 58862853 58863058 -30641495 + MIR SINE MIR 33 252 -10 289 319 62 18 chr17 58863808 58863921 -30640632 - L2 LINE L2 -9 3263 3146 23 0 0 0 chr17 58864015 58864038 -30640515 + AT_rich Low_complexity Low_complexity 1 23 0 1767 252 68 74 chr17 58864105 58865247 -30639306 - L1MC5 LINE L1 -210 7751 6616 5317 119 16 1 chr17 58865445 58866959 -30637594 - L1PA15 LINE L1 -2 6163 4586 354 274 60 8 chr17 58867044 58867180 -30637373 - MIR SINE MIR -49 213 71 623 263 15 39 chr17 58868620 58868825 -30635728 - MIR SINE MIR -54 208 9 636 207 29 0 chr17 58869958 58870132 -30634421 + CT-rich Low_complexity Low_complexity 2 180 0 874 219 0 0 chr17 58870147 58870298 -30634255 - FRAM SINE Alu -26 150 1 203 271 57 43 chr17 58870682 58870752 -30633801 + L2 LINE L2 3216 3286 -27 5593 60 3 1 chr17 58872043 58872762 -30631791 + L1PA7 LINE L1 5432 6151 -3 266 65 87 0 chr17 58872769 58872815 -30631738 + MER53 DNA DNA 93 142 -47 205 317 83 25 chr17 58874080 58874200 -30630353 + L3 LINE CR1 324 450 -1127 221 312 81 69 chr17 58874445 58874618 -30629935 + L3 LINE CR1 764 938 -639 960 346 91 40 chr17 58874624 58875881 -30628672 - L2 LINE L2 0 3313 1939 2308 266 51 35 chr17 58875982 58876456 -30628097 + L1ME1 LINE L1 4395 4860 -1306 1808 145 0 0 chr17 58876456 58876718 -30627835 + AluSq SINE Alu 1 262 -51 2308 266 51 35 chr17 58876718 58877975 -30626578 + L1ME1 LINE L1 4860 6162 -4 192 235 0 0 chr17 58878320 58878354 -30626199 + L2 LINE L2 3023 3056 -257 833 238 44 51 chr17 58878490 58878805 -30625748 + MER83C LTR ERV1 49 361 -12 33791 37 5 2 chr17 58878999 58883913 -30620640 + L1PA4 LINE L1 1231 6153 -2 5067 162 13 48 chr17 58883961 58884468 -30620085 + L1MA3 LINE L1 5270 5766 -539 236 139 0 0 chr17 58884468 58884511 -30620042 + AluSq SINE Alu 258 300 0 5067 162 13 48 chr17 58884511 58884991 -30619562 + L1MA3 LINE L1 5766 6262 -43 245 323 67 73 chr17 58885119 58885283 -30619270 + L3 LINE CR1 1374 1536 -41 270 0 0 0 chr17 58885599 58885629 -30618924 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 357 24 0 0 chr17 58885628 58885670 -30618883 + (TG)n Simple_repeat Simple_repeat 1 42 0 1958 129 0 4 chr17 58885670 58885950 -30618603 - AluSx SINE Alu -33 279 1 26 50 0 0 chr17 58886672 58886712 -30617841 + AT_rich Low_complexity Low_complexity 1 40 0 244 241 37 19 chr17 58886947 58887001 -30617552 - L2 LINE L2 -15 3257 3203 476 307 40 0 chr17 58887392 58887568 -30616985 - MIR SINE MIR -6 256 74 284 284 0 0 chr17 58887630 58887697 -30616856 + L2 LINE L2 3246 3312 -1 189 107 0 0 chr17 58887814 58887842 -30616711 + (TA)n Simple_repeat Simple_repeat 2 29 0 240 186 34 0 chr17 58887932 58887991 -30616562 + (TA)n Simple_repeat Simple_repeat 2 62 0 232 264 16 47 chr17 58888762 58888891 -30615662 + L1MC5 LINE L1 7812 7936 -25 2274 113 0 0 chr17 58888940 58889249 -30615304 - AluSc SINE Alu 0 309 1 23 0 0 0 chr17 58890916 58890939 -30613614 + AT_rich Low_complexity Low_complexity 1 23 0 23 97 0 0 chr17 58891129 58891201 -30613352 + AT_rich Low_complexity Low_complexity 1 72 0 314 268 42 95 chr17 58891885 58892053 -30612500 - MIR SINE MIR -50 212 54 182 206 0 0 chr17 58892408 58892442 -30612111 - L2 LINE L2 -17 3296 3263 229 278 70 35 chr17 58892810 58892925 -30611628 - L2 LINE L2 -12 3301 3183 494 365 72 17 chr17 58893121 58893480 -30611073 - L2 LINE L2 -514 2800 2422 501 223 17 6 chr17 58894238 58894357 -30610196 + MER58B DNA MER1_type 202 321 -20 4483 21 11 0 chr17 58894569 58895097 -30609456 + L1PA4 LINE L1 5622 6155 0 436 145 84 0 chr17 58895562 58895645 -30608908 + MER89 LTR ERV1 1 90 -469 29 28 0 0 chr17 58897787 58897823 -30606730 + AT_rich Low_complexity Low_complexity 1 36 0 293 256 95 0 chr17 58897865 58898002 -30606551 + L1ME4a LINE L1 5772 5921 -200 300 294 83 0 chr17 58898067 58898176 -30606377 + L1ME4a LINE L1 6002 6119 -2 199 359 0 0 chr17 58899330 58899394 -30605159 - MIR SINE MIR -62 146 83 1913 199 11 0 chr17 58899627 58899988 -30604565 + MLT1A1 LTR MaLR 1 365 0 313 140 0 183 chr17 58900294 58900387 -30604166 + MADE1 DNA Mariner 1 76 -4 1129 169 17 96 chr17 58900777 58901079 -30603474 - L1MB8 LINE L1 -1 6177 5900 435 239 158 68 chr17 58901080 58901390 -30603163 + L2 LINE L2 1590 1927 -1387 391 339 43 100 chr17 58901393 58901474 -30603079 + L2 LINE L2 2989 3073 -199 809 187 141 35 chr17 58901474 58901672 -30602881 - MER20 DNA MER1_type 0 219 1 391 339 43 100 chr17 58901672 58901891 -30602662 + L2 LINE L2 3073 3272 0 1925 111 7 28 chr17 58902225 58902553 -30602000 + AluY SINE Alu 1 322 0 186 320 0 0 chr17 58902852 58902902 -30601651 - MIR SINE MIR -12 250 201 23 0 0 0 chr17 58903100 58903123 -30601430 + AT_rich Low_complexity Low_complexity 1 23 0 2385 80 3 0 chr17 58903568 58903869 -30600684 - AluY SINE Alu -9 302 1 24 0 0 0 chr17 58904106 58904130 -30600423 + AT_rich Low_complexity Low_complexity 1 24 0 621 269 92 40 chr17 58905236 58905461 -30599092 + MIR SINE MIR 1 242 -20 2335 132 83 0 chr17 58905461 58905856 -30598697 - MSTA LTR MaLR 0 428 1 621 269 92 40 chr17 58905856 58905879 -30598674 + MIR SINE MIR 242 262 0 316 212 94 12 chr17 58905893 58905978 -30598575 - MIR SINE MIR -82 180 89 304 275 84 67 chr17 58906027 58906205 -30598348 - MARNA DNA Mariner -378 208 28 2055 85 0 0 chr17 58906617 58906876 -30597677 + AluY SINE Alu 35 293 -18 426 254 40 16 chr17 58907185 58907311 -30597242 + MIR SINE MIR 84 212 -50 1844 138 105 12 chr17 58907324 58907658 -30596895 - MSTA LTR MaLR 0 428 64 1827 172 57 25 chr17 58907763 58907801 -30596752 - MLT2D LTR ERVL 0 414 379 306 0 0 0 chr17 58907801 58907835 -30596718 + (CA)n Simple_repeat Simple_repeat 2 35 0 1827 172 57 25 chr17 58907835 58908197 -30596356 - MLT2D LTR ERVL -35 379 1 191 59 0 29 chr17 58908393 58908427 -30596126 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1905 118 7 0 chr17 58908434 58908722 -30595831 - L1PB1 LINE L1 -17 6134 5845 5041 180 23 6 chr17 58908736 58909802 -30594751 - L1MD1 LINE L1 -14 6228 5144 1590 226 35 35 chr17 58909831 58910370 -30594183 - L1MD1 LINE L1 -1194 4952 4414 362 300 0 0 chr17 58911338 58911418 -30593135 - MER81 DNA DNA -4 110 31 225 343 0 0 chr17 58911421 58911494 -30593059 - MER81 DNA DNA -41 73 1 210 348 37 30 chr17 58911498 58911633 -30592920 + MIR SINE MIR 62 197 -65 311 309 19 11 chr17 58913185 58913349 -30591204 - L2 LINE L2 -17 3255 3010 1011 259 133 0 chr17 58913599 58913946 -30590607 - L1MC4 LINE L1 -163 7879 7487 1837 170 3 3 chr17 58914268 58914568 -30589985 + AluSx SINE Alu 1 300 -12 420 97 0 0 chr17 58915196 58915258 -30589295 + (CA)n Simple_repeat Simple_repeat 1 62 0 184 288 130 89 chr17 58915321 58915467 -30589086 - L2 LINE L2 -9 3263 3112 714 172 0 6 chr17 58915558 58915819 -30588734 + AluJ SINE Alu 1 308 -4 694 343 46 20 chr17 58916063 58916625 -30587928 - L1ME3 LINE L1 -208 5954 5378 2066 119 3 0 chr17 58917433 58917751 -30586802 - L1MA3 LINE L1 0 6305 5987 186 380 74 16 chr17 58918814 58918935 -30585618 - L3b LINE CR1 -131 1452 1325 526 245 59 38 chr17 58919047 58919314 -30585239 + L1MC4a LINE L1 5200 5477 -749 1249 102 16 79 chr17 58919339 58919449 -30585104 + L1PA4 LINE L1 5611 5726 -429 8134 55 1 0 chr17 58919449 58920414 -30584139 + LTR5 LTR ERVK 1 966 -3 1249 102 16 79 chr17 58920414 58920432 -30584121 + L1PA4 LINE L1 5726 5744 -411 2309 39 3 0 chr17 58920432 58920717 -30583836 - L1PA4 LINE L1 -4 6151 5866 1249 102 16 79 chr17 58920717 58920871 -30583682 + L1PA4 LINE L1 5744 5862 -293 261 276 31 0 chr17 58920909 58921007 -30583546 + L1MC4a LINE L1 5815 5915 -1893 289 323 252 7 chr17 58921860 58922015 -30582538 + MER91A DNA MER1_type 4 196 0 23 86 0 0 chr17 58922549 58922607 -30581946 + AT_rich Low_complexity Low_complexity 1 58 0 2140 119 3 26 chr17 58922863 58923175 -30581378 - AluSg SINE Alu -5 305 1 299 255 42 0 chr17 58923345 58923453 -30581100 + L1MC/D LINE L1 5700 5814 -312 36 0 0 0 chr17 58923516 58923552 -30581001 + AT_rich Low_complexity Low_complexity 1 36 0 392 120 27 0 chr17 58923690 58923765 -30580788 + L1MA5A LINE L1 6104 6180 -117 * 6679 130 53 29 chr17 58923764 58925311 -30579242 + L1PA14 LINE L1 3861 5338 -823 2192 94 13 7 chr17 58925311 58925620 -30578933 + AluY SINE Alu 1 311 0 6679 130 53 29 chr17 58925620 58926465 -30578088 + L1PA14 LINE L1 5338 6161 0 27 49 0 0 chr17 58926760 58926801 -30577752 + AT_rich Low_complexity Low_complexity 1 41 0 221 320 148 33 chr17 58927485 58927607 -30576946 + L2 LINE L2 3137 3272 0 479 330 85 14 chr17 58927907 58928119 -30576434 - MIR SINE MIR -4 258 32 1463 188 7 15 chr17 58928137 58928457 -30576096 + AluJo SINE Alu 15 332 0 28 79 0 0 chr17 58928500 58928563 -30575990 + AT_rich Low_complexity Low_complexity 1 63 0 254 284 45 11 chr17 58928751 58928839 -30575714 - L3 LINE CR1 -562 1015 925 326 143 29 14 chr17 58928839 58928909 -30575644 - MLT1L LTR MaLR 0 615 545 331 318 53 69 chr17 58930843 58931032 -30573521 + L2 LINE L2 3105 3290 -23 305 262 0 48 chr17 58932132 58932216 -30572337 + MIR SINE MIR 69 148 -60 1076 240 116 30 chr17 58932356 58932718 -30571835 + MLT1C LTR MaLR 66 458 -9 437 316 30 12 chr17 58933030 58933198 -30571355 + LTR33 LTR ERVL 15 185 -336 3008 177 88 10 chr17 58934101 58934723 -30569830 + LTR51 LTR ERV1 1 671 0 1089 219 59 6 chr17 58936251 58936571 -30567982 - LTR37A LTR ERV1 -9 417 81 237 159 0 0 chr17 58936621 58936665 -30567888 + T-rich Low_complexity Low_complexity 1 44 0 205 323 46 0 chr17 58938597 58938662 -30565891 - L2 LINE L2 -9 3263 3196 240 35 0 0 chr17 58938833 58938862 -30565691 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 186 376 94 0 chr17 58940672 58940757 -30563796 - L2 LINE L2 -245 3027 2935 2350 93 3 0 chr17 58941144 58941456 -30563097 - AluSp SINE Alu 0 313 1 364 323 82 35 chr17 58942080 58942312 -30562241 - MIR SINE MIR 0 262 20 258 376 43 0 chr17 58942691 58942808 -30561745 - MIR3 SINE MIR -54 154 33 261 0 0 0 chr17 58942921 58942950 -30561603 + (CA)n Simple_repeat Simple_repeat 2 30 0 941 215 5 5 chr17 58943523 58943728 -30560825 + L1PB4 LINE L1 5950 6154 -2 548 93 0 102 chr17 58944366 58944474 -30560079 - L1PA8 LINE L1 0 6172 6076 212 360 13 0 chr17 58944587 58944662 -30559891 + MIR SINE MIR 15 90 -172 * 1373 270 169 55 chr17 58944659 58944743 -30559810 + L2 LINE L2 1919 1992 -1322 2144 123 51 23 chr17 58944743 58945093 -30559460 + THE1B LTR MaLR 1 360 -4 11347 101 19 0 chr17 58945097 58946647 -30557906 + THE1B-int LTR MaLR 1 1580 0 2299 101 48 22 chr17 58946647 58947002 -30557551 + THE1B LTR MaLR 1 364 0 1373 270 169 55 chr17 58947002 58947633 -30556920 + L2 LINE L2 1993 2722 -592 461 125 14 0 chr17 58948130 58948202 -30556351 - MADE1 DNA Mariner -7 73 1 225 96 68 14 chr17 58950048 58950121 -30554432 + (TA)n Simple_repeat Simple_repeat 1 77 0 238 134 15 45 chr17 58950173 58950240 -30554313 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 236 371 86 0 chr17 58950671 58950776 -30553777 - L2 LINE L2 -2 3311 3198 271 264 103 0 chr17 58950981 58951068 -30553485 - MIR SINE MIR -54 208 113 553 172 0 33 chr17 58951148 58951270 -30553283 - LTR41 LTR ERVL -6 767 650 59 81 0 0 chr17 58952191 58952327 -30552226 + AT_rich Low_complexity Low_complexity 1 136 0 1520 194 16 87 chr17 58952580 58952973 -30551580 + MLT1A1 LTR MaLR 1 466 -1 240 309 134 0 chr17 58953137 58953234 -30551319 + MIR SINE MIR 80 189 -73 287 289 193 7 chr17 58954805 58954940 -30549613 - MIR SINE MIR -83 179 20 324 48 0 0 chr17 58955537 58955579 -30548974 + (CA)n Simple_repeat Simple_repeat 2 43 0 1509 257 79 77 chr17 58955862 58956396 -30548157 - MLT1E LTR MaLR 0 593 59 243 0 0 0 chr17 58956400 58956427 -30548126 + (TG)n Simple_repeat Simple_repeat 1 27 0 255 248 147 37 chr17 58956584 58956693 -30547860 + MIR SINE MIR 71 191 -71 33 43 0 0 chr17 58956917 58956964 -30547589 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr17 58957033 58957062 -30547491 + AT_rich Low_complexity Low_complexity 1 29 0 233 326 136 0 chr17 58957298 58957482 -30547071 - L1ME LINE L1 -383 5738 5530 303 277 0 12 chr17 58957494 58957577 -30546976 + MIR SINE MIR 181 262 0 301 284 153 44 chr17 58958563 58958975 -30545578 - L1MC/D LINE L1 -2098 5710 5254 348 245 113 31 chr17 58959448 58959607 -30544946 - L1MC/D LINE L1 -2949 3197 3026 21 36 0 0 chr17 58959669 58959697 -30544856 + AT_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr17 58960897 58960944 -30543609 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr17 58961056 58961077 -30543476 + AT_rich Low_complexity Low_complexity 1 21 0 1737 210 73 54 chr17 58961196 58961700 -30542853 - MER67D LTR ERV1 0 514 1 1464 294 50 33 chr17 58962498 58963079 -30541474 + MLT1E LTR MaLR 1 591 -2 413 193 30 0 chr17 58963231 58963366 -30541187 + (TA)n Simple_repeat Simple_repeat 2 140 0 235 250 11 43 chr17 58963367 58963459 -30541094 + L1MC4 LINE L1 6615 6703 -1339 229 255 0 53 chr17 58963408 58963502 -30541051 - L1MC4 LINE L1 -1339 6703 6615 * 462 236 22 11 chr17 58963516 58963694 -30540859 + (TA)n Simple_repeat Simple_repeat 1 180 0 306 211 0 62 chr17 58963749 58963871 -30540682 - L1MC3 LINE L1 -1139 6646 6569 233 174 29 14 chr17 58963901 58963970 -30540583 + L1MCa LINE L1 1995 2064 -4362 360 189 0 0 chr17 58963970 58964044 -30540509 + (TA)n Simple_repeat Simple_repeat 1 74 0 313 253 0 53 chr17 58964045 58964140 -30540413 + L1MC4 LINE L1 6614 6703 -1339 451 317 162 34 chr17 58964230 58964643 -30539910 + HAL1 LINE L1 1280 1745 -762 300 294 35 123 chr17 58964726 58964954 -30539599 + HAL1 LINE L1 1 208 -2299 3275 124 6 34 chr17 58964975 58965476 -30539077 - MER1A DNA MER1_type -8 521 35 330 294 75 86 chr17 58966207 58966592 -30537961 + L1M4 LINE L1 4177 4557 -1589 559 158 58 7 chr17 58966670 58966809 -30537744 + Charlie5 DNA MER1_type 2413 2558 -54 33 25 0 0 chr17 58967245 58967285 -30537268 + AT_rich Low_complexity Low_complexity 1 40 0 4884 295 104 36 chr17 58967353 58968193 -30536360 - L2 LINE L2 0 3313 2531 243 88 0 0 chr17 58968193 58968227 -30536326 + (GGCTG)n Simple_repeat Simple_repeat 5 38 0 4884 295 104 36 chr17 58968227 58970364 -30534189 - L2 LINE L2 -782 2531 19 3778 180 83 8 chr17 58970827 58971595 -30532958 - LTR1B LTR ERV1 0 826 1 1801 135 3 80 chr17 58971776 58972101 -30532452 - AluSx SINE Alu -12 300 1 186 43 0 0 chr17 58972106 58972129 -30532424 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1760 122 12 0 chr17 58972132 58972378 -30532175 - AluSq SINE Alu -30 283 35 2169 164 23 46 chr17 58972571 58973009 -30531544 + MSTC LTR MaLR 1 428 0 566 251 25 6 chr17 58974087 58974250 -30530303 - MLT1G LTR MaLR -6 584 419 592 294 81 38 chr17 58974371 58974718 -30529835 - MLT1G LTR MaLR -214 376 15 668 219 32 26 chr17 58975431 58975586 -30528967 + MER77 LTR ERV1 41 196 -409 24 103 0 0 chr17 58975600 58975687 -30528866 + AT_rich Low_complexity Low_complexity 1 87 0 1867 144 0 24 chr17 58975795 58976115 -30528438 - AluSx SINE Alu 0 313 1 929 324 32 18 chr17 58976124 58976562 -30527991 + MLT1J LTR MaLR 68 511 0 22 0 0 0 chr17 58976650 58976672 -30527881 + AT_rich Low_complexity Low_complexity 1 22 0 1682 194 45 0 chr17 58978099 58978429 -30526124 + MER7A DNA MER2_type 2 344 -2 422 264 165 0 chr17 58978451 58978572 -30525981 + MIR SINE MIR 13 153 -109 1246 185 65 93 chr17 58978588 58979052 -30525501 + MLT1C LTR MaLR 1 451 -16 334 213 27 27 chr17 58979080 58979155 -30525398 + MIR SINE MIR 173 247 -15 1158 244 83 75 chr17 58979220 58979728 -30524825 - MLT1F1 LTR MaLR -30 537 1 194 280 40 0 chr17 58979769 58979819 -30524734 + L2 LINE L2 3221 3272 0 341 300 0 10 chr17 58980357 58980457 -30524096 + MIR SINE MIR 153 251 -11 1123 197 98 99 chr17 58980565 58980976 -30523577 + MLT2D LTR ERVL 1 515 -5 629 199 101 37 chr17 58980982 58981249 -30523304 + L1MD3 LINE L1 6088 7943 -9 2251 91 0 7 chr17 58981865 58982162 -30522391 + AluSq SINE Alu 1 295 -18 4170 81 36 11 chr17 58982353 58983452 -30521101 - MER11A LTR ERVK 0 1266 1 2581 134 49 7 chr17 58984786 58985333 -30519220 - LTR9B LTR ERV1 0 644 5 214 404 15 22 chr17 58985788 58985914 -30518639 + L2 LINE L2 854 979 -2335 728 223 112 0 chr17 58985914 58986111 -30518442 + MER20 DNA MER1_type 1 219 0 214 404 15 22 chr17 58986111 58986256 -30518297 + L2 LINE L2 979 1123 -2191 2049 158 47 34 chr17 58986274 58986819 -30517734 - MLT2A2 LTR ERVL 0 554 1 1413 253 50 11 chr17 58986821 58987264 -30517289 - MER110 LTR ERV1 -15 476 17 282 248 75 68 chr17 58987268 58987394 -30517159 - MIR SINE MIR -82 126 2 411 310 118 58 chr17 58987698 58988114 -30516439 + LTR16A LTR ERVL 1 441 -9 461 332 96 5 chr17 58988200 58988408 -30516145 - MIR SINE MIR -8 254 28 344 242 105 24 chr17 58989122 58989246 -30515307 - L2 LINE L2 0 3272 3139 203 378 14 0 chr17 58989281 58989355 -30515198 + MIR SINE MIR 46 120 -142 24 32 0 0 chr17 58989459 58989490 -30515063 + AT_rich Low_complexity Low_complexity 1 31 0 1620 208 27 3 chr17 58990350 58990682 -30513871 + MER2 DNA MER2_type 1 340 -5 200 301 48 41 chr17 58990701 58990847 -30513706 + L2 LINE L2 2660 2806 -508 1735 124 62 33 chr17 58992122 58992441 -30512112 - AluSx SINE Alu 0 327 1 422 271 45 32 chr17 58993577 58993732 -30510821 - MIR SINE MIR -2 260 104 310 227 0 0 chr17 58993842 58993908 -30510645 - MER92C LTR ERV1 -2 552 487 273 162 9 198 chr17 58994037 58994148 -30510405 - MER92C LTR ERV1 -496 58 1 1666 123 45 41 chr17 58994784 58995052 -30509501 - AluSq SINE Alu -44 269 1 352 198 20 30 chr17 58995359 58995460 -30509093 - LTR37A LTR ERV1 -286 140 41 23 0 0 0 chr17 58995819 58995842 -30508711 + AT_rich Low_complexity Low_complexity 1 23 0 658 334 28 26 chr17 58995842 58995930 -30508623 - HERV16 LTR ERVL -4604 392 306 791 268 6 0 chr17 58995930 58996113 -30508440 + MER5A DNA MER1_type 5 188 -1 658 334 28 26 chr17 58996113 58996413 -30508140 - HERV16 LTR ERVL -4690 306 3 505 358 79 10 chr17 58996416 58996832 -30507721 - LTR16A LTR ERVL -5 445 1 313 258 34 22 chr17 58996835 58996924 -30507629 - MIR SINE MIR -158 104 15 219 196 0 0 chr17 58997534 58997580 -30506973 + L2 LINE L2 3268 3313 0 571 167 0 0 chr17 58997994 58998078 -30506475 - AluJ/FLAM SINE Alu -228 84 1 788 302 85 21 chr17 58998080 58998504 -30506049 - LTR33 LTR ERVL -70 451 1 314 355 7 35 chr17 58998554 58998695 -30505858 + MIR3 SINE MIR 20 156 -52 420 266 73 66 chr17 58998783 58999069 -30505484 + MLT1I LTR MaLR 70 357 -52 284 109 0 22 chr17 58999249 58999295 -30505258 + Charlie5 DNA MER1_type 6 50 -2562 * 588 205 101 0 chr17 58999288 58999429 -30505124 - MER58A DNA MER1_type -55 169 35 259 292 79 0 chr17 58999453 58999542 -30505011 + MIR SINE MIR 20 115 -147 230 288 72 72 chr17 59000377 59000488 -30504065 + L2 LINE L2 3203 3313 0 375 169 0 0 chr17 59001186 59001289 -30503264 + AluJ/FRAM SINE Alu 224 326 0 276 282 0 0 chr17 59001296 59001367 -30503186 + MIR SINE MIR 165 235 -27 282 290 19 77 chr17 59001526 59001681 -30502872 - MIR3 SINE MIR -46 162 17 1160 79 12 6 chr17 59003735 59003900 -30500653 - PABL_A LTR ERV1 0 660 495 1552 105 14 47 chr17 59003900 59004176 -30500377 + LTR12 LTR ERV1 19 285 -429 281 274 11 0 chr17 59004176 59004271 -30500282 + LTR30 LTR ERV1 552 647 -75 672 139 0 0 chr17 59004271 59004372 -30500181 + LTR12 LTR ERV1 484 584 -130 43458 106 9 16 chr17 59004388 59007006 -30497547 + HERV9 LTR ERV1 54 2688 -5711 2077 92 0 28 chr17 59007006 59007288 -30497265 + AluY SINE Alu 22 295 -16 43458 106 9 16 chr17 59007288 59011347 -30493206 + HERV9 LTR ERV1 2688 6687 -1712 2013 121 78 29 chr17 59012217 59012564 -30491989 + THE1B LTR MaLR 1 364 0 183 298 43 0 chr17 59013183 59013230 -30491323 - L2 LINE L2 -2 3270 3222 2167 128 10 0 chr17 59013712 59014018 -30490535 + AluSx SINE Alu 1 309 -3 2250 121 0 0 chr17 59014592 59014897 -30489656 + AluSx SINE Alu 1 305 -7 391 329 55 37 chr17 59015027 59015191 -30489362 - MER5B DNA MER1_type -1 177 11 1216 282 54 40 chr17 59015821 59015929 -30488624 - L1ME3A LINE L1 -80 6090 5985 2526 54 0 22 chr17 59015929 59016244 -30488309 + AluY SINE Alu 1 308 -3 1216 282 54 40 chr17 59016244 59016729 -30487824 - L1ME3A LINE L1 -185 5985 5481 1664 137 137 0 chr17 59016729 59016991 -30487562 - AluSx SINE Alu -4 298 1 1216 282 54 40 chr17 59016991 59017151 -30487402 - L1ME3A LINE L1 -689 5481 5325 340 228 16 167 chr17 59017200 59017446 -30487107 - L2 LINE L2 -2 3311 3103 330 331 51 13 chr17 59017565 59017722 -30486831 + MLT1I LTR MaLR 243 405 -4 230 307 9 26 chr17 59018082 59018246 -30486307 + (CATATA)n Simple_repeat Simple_repeat 1 161 0 781 216 56 113 chr17 59018316 59018867 -30485686 - L1M4 LINE L1 -3413 2733 2214 2289 88 3 3 chr17 59018887 59019183 -30485370 + AluY SINE Alu 1 296 -15 2793 232 28 26 chr17 59019205 59019982 -30484571 + L1ME3 LINE L1 5384 6162 0 530 260 66 15 chr17 59020772 59020968 -30483585 + MIR SINE MIR 7 212 -50 2183 111 3 7 chr17 59020986 59021283 -30483270 - AluSg SINE Alu -14 296 1 187 298 137 30 chr17 59022667 59022835 -30481718 + MIR SINE MIR 39 224 -38 352 316 71 0 chr17 59024471 59024626 -30479927 - MLT1I LTR MaLR -26 383 218 1575 241 85 25 chr17 59024630 59025066 -30479487 + MLT1C LTR MaLR 6 467 0 531 295 13 0 chr17 59025127 59025276 -30479277 - MLT1I LTR MaLR -254 155 5 1665 116 14 0 chr17 59026151 59026428 -30478125 - L1MA3 LINE L1 0 6305 6025 246 182 0 0 chr17 59027206 59027261 -30477292 - L1MA3 LINE L1 0 6305 6251 * 1337 90 0 98 chr17 59027256 59027502 -30477051 + L1PA13 LINE L1 5606 5827 -336 186 43 0 0 chr17 59027503 59027526 -30477027 + (TA)n Simple_repeat Simple_repeat 1 23 0 588 65 0 0 chr17 59027592 59027669 -30476884 + (TA)n Simple_repeat Simple_repeat 1 77 0 2263 102 3 0 chr17 59027670 59027993 -30476560 + L1PA13 LINE L1 5839 6162 -1 207 349 9 38 chr17 59028626 59028732 -30475821 + L2 LINE L2 2958 3060 -212 193 245 0 57 chr17 59028922 59028975 -30475578 + MER5B DNA MER1_type 113 162 -16 326 373 37 25 chr17 59029947 59030108 -30474445 + MER5A DNA MER1_type 6 168 -21 1236 210 32 61 chr17 59030414 59030790 -30473763 - MLT1A1 LTR MaLR 0 365 1 324 203 145 43 chr17 59031757 59031895 -30472658 - MER104 DNA Tc2 -28 152 1 316 130 338 13 chr17 59032106 59032183 -30472370 - MER41A-int LTR ERV1 -5844 102 1 3826 100 0 42 chr17 59032183 59032761 -30471792 - MER41A LTR ERV1 0 554 1 8486 96 43 22 chr17 59032761 59034082 -30470471 - MER41A-int LTR ERV1 -2 5944 4596 35037 109 9 10 chr17 59034100 59037857 -30466696 + L1PA6 LINE L1 11 3759 -2395 2237 106 0 0 chr17 59037857 59038159 -30466394 + AluY SINE Alu 2 303 -8 35037 109 9 10 chr17 59038159 59040546 -30464007 + L1PA6 LINE L1 3759 6147 -7 5582 125 42 34 chr17 59040547 59042002 -30462551 - MER41A-int LTR ERV1 -1228 3787 2606 3062 143 46 36 chr17 59042006 59042595 -30461958 - MER41A-int LTR ERV1 -4459 1477 632 * 5002 163 39 4 chr17 59042564 59043393 -30461160 - MER41A-int LTR ERV1 -5088 858 1 303 113 57 19 chr17 59043430 59043483 -30461070 - MER41A-int LTR ERV1 -5891 55 1 3086 89 85 69 chr17 59043490 59043598 -30460955 - MER41A LTR ERV1 -7 628 523 3155 41 0 3 chr17 59043598 59043988 -30460565 + L1PA4 LINE L1 5764 6152 -3 3086 89 85 69 chr17 59043988 59044455 -30460098 - MER41A LTR ERV1 -112 523 9 708 234 13 39 chr17 59044901 59045007 -30459546 - L1M4c LINE L1 -3953 2431 2324 186 103 0 0 chr17 59045007 59045036 -30459517 + (TG)n Simple_repeat Simple_repeat 2 30 0 708 234 13 39 chr17 59045036 59045236 -30459317 - L1M4c LINE L1 -4060 2324 2133 379 196 59 20 chr17 59045238 59045340 -30459213 + LTR30 LTR ERV1 547 652 -70 597 178 0 0 chr17 59045340 59045441 -30459112 + LTR12 LTR ERV1 484 584 -130 546 167 0 0 chr17 59045457 59045547 -30459006 + HERV9 LTR ERV1 54 143 -8256 * 4441 123 5 58 chr17 59045535 59046297 -30458256 - HERV9 LTR ERV1 -7303 1096 375 * 18317 99 21 6 chr17 59046288 59048870 -30455683 + HERV9 LTR ERV1 2935 5556 -2843 4868 132 11 54 chr17 59048869 59050125 -30454428 + HERV9 LTR ERV1 6868 8399 0 * 257 231 0 0 chr17 59050125 59050177 -30454376 + LTR30 LTR ERV1 1 52 -670 692 145 22 167 chr17 59050177 59050425 -30454128 + LTR12 LTR ERV1 100 285 -429 358 194 0 0 chr17 59050426 59050498 -30454055 + LTR30 LTR ERV1 553 624 -98 207 0 0 0 chr17 59050509 59050532 -30454021 + (TAA)n Simple_repeat Simple_repeat 2 24 0 299 261 61 0 chr17 59050533 59050648 -30453905 - L1M4c LINE L1 -4257 2127 2006 618 240 27 11 chr17 59050656 59050839 -30453714 - L1M4c LINE L1 -4480 1904 1719 260 250 0 0 chr17 59050918 59050986 -30453567 - L1M4c LINE L1 -4841 1543 1476 2548 167 60 19 chr17 59050987 59051353 -30453200 - MER84 LTR ERV1 0 507 158 297 0 0 0 chr17 59051353 59051386 -30453167 + (TTA)n Simple_repeat Simple_repeat 1 33 0 2078 135 3 0 chr17 59051391 59051680 -30452873 - AluSx SINE Alu -22 290 1 2548 167 60 19 chr17 59051680 59051793 -30452760 - MER84 LTR ERV1 -352 155 2 395 192 27 14 chr17 59051793 59051866 -30452687 - MER84 LTR ERVI -433 74 1 2399 242 89 89 chr17 59051868 59052268 -30452285 - L1M4c LINE L1 -4907 1477 1078 755 237 123 56 chr17 59052268 59052610 -30451943 - MLT1A1 LTR MaLR 0 365 1 2399 242 89 89 chr17 59052610 59053656 -30450897 - L1M4c LINE L1 -5305 1079 31 292 138 31 15 chr17 59053715 59053780 -30450773 + GA-rich Low_complexity Low_complexity 3 68 0 2215 145 22 8 chr17 59053799 59054158 -30450395 + THE1B LTR MaLR 1 364 0 2218 111 3 0 chr17 59054787 59055084 -30449469 + AluSp SINE Alu 1 298 -15 528 111 42 0 chr17 59055084 59055228 -30449325 + (TA)n Simple_repeat Simple_repeat 1 150 0 297 51 0 0 chr17 59056775 59056814 -30447739 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1812 67 0 13 chr17 59056837 59057062 -30447491 - AluSg SINE Alu -88 222 1 23 86 0 0 chr17 59058230 59058288 -30446265 + AT_rich Low_complexity Low_complexity 1 58 0 236 245 32 21 chr17 59058298 59058392 -30446161 + L1MCc LINE L1 1368 1462 -4961 225 318 99 31 chr17 59059171 59059394 -30445159 + L1ME LINE L1 5327 5564 -557 1834 208 20 3 chr17 59060011 59060353 -30444200 + MLT1A1 LTR MaLR 1 348 -17 658 340 69 50 chr17 59060622 59061493 -30443060 + L1MC4a LINE L1 4352 5238 -908 379 264 147 84 chr17 59061853 59061982 -30442571 + L1MC4a LINE L1 5260 5379 -2429 1733 136 107 0 chr17 59061982 59062254 -30442299 + AluSx SINE Alu 1 301 -11 379 264 147 84 chr17 59062254 59062615 -30441938 + L1MC4a LINE L1 5379 5797 -2011 3622 136 17 30 chr17 59062615 59063256 -30441297 + MER41B LTR ERV1 3 635 0 379 264 147 84 chr17 59063256 59063362 -30441191 + L1MC4a LINE L1 5797 5895 -1913 3077 62 0 108 chr17 59063362 59063862 -30440691 + LTR7 LTR ERV1 1 446 -4 4568 172 10 32 chr17 59064112 59064841 -30439712 - MER4D LTR ERV1 -46 857 149 2365 91 0 0 chr17 59064841 59065138 -30439415 + AluY SINE Alu 1 297 -14 4568 172 10 32 chr17 59065138 59065284 -30439269 - MER4D LTR ERV1 -754 149 1 214 281 45 11 chr17 59065562 59065651 -30438902 + MIR SINE MIR 84 175 -87 2023 174 66 9 chr17 59065659 59066271 -30438282 - LTR34 LTR ERV1 0 699 13 1988 147 95 0 chr17 59066410 59066778 -30437775 + MER57A LTR ERV1 1 403 0 1606 153 91 33 chr17 59067231 59067811 -30436742 + LTR8 LTR ERV1 1 691 0 707 278 81 64 chr17 59067871 59068016 -30436537 + L1MCc LINE L1 1618 1759 -5182 285 75 0 0 chr17 59068016 59068056 -30436497 + (CA)n Simple_repeat Simple_repeat 2 41 0 707 278 81 64 chr17 59068056 59068583 -30435970 + L1MCc LINE L1 1759 2304 -4637 1875 162 0 14 chr17 59068583 59068879 -30435674 - AluSx SINE Alu -20 292 1 707 278 81 64 chr17 59068879 59068981 -30435572 + L1MCc LINE L1 2304 2403 -4538 384 268 43 59 chr17 59069214 59069436 -30435117 - MLT1J LTR MaLR -250 261 1 330 339 58 5 chr17 59069441 59069665 -30434888 + L1M4 LINE L1 3538 3773 -2373 366 322 48 14 chr17 59069709 59069855 -30434698 + LTR16A LTR ERVL 8 158 -292 494 305 52 6 chr17 59069874 59070048 -30434505 + LTR16A LTR ERVL 269 450 0 543 281 0 38 chr17 59070048 59070259 -30434294 + L1M4 LINE L1 3810 4012 -2134 * 6079 243 66 31 chr17 59070254 59070475 -30434078 - L1MDa LINE L1 -1994 4546 4334 2100 130 3 0 chr17 59070475 59070774 -30433779 - AluSx SINE Alu -8 304 5 6079 243 66 31 chr17 59070774 59071926 -30432627 - L1MDa LINE L1 -2206 4334 3224 2107 110 3 25 chr17 59071926 59072244 -30432309 + AluY SINE Alu 1 311 0 6079 243 66 31 chr17 59072244 59074186 -30430367 - L1MDa LINE L1 -3316 3224 1352 2233 131 28 14 chr17 59074186 59074545 -30430008 - THE1B LTR MaLR 0 364 1 11033 108 17 2 chr17 59074545 59076102 -30428451 - THE1B-int LTR MaLR 0 1580 1 2210 138 28 19 chr17 59076102 59076463 -30428090 - THE1B LTR MaLR 0 364 1 6079 243 66 31 chr17 59076463 59077058 -30427495 - L1MDa LINE L1 -5187 1353 502 231 355 132 8 chr17 59077478 59077599 -30426954 + MIR3 SINE MIR 8 143 -65 21 0 0 0 chr17 59077885 59077906 -30426647 + AT_rich Low_complexity Low_complexity 1 21 0 2091 189 42 59 chr17 59078595 59078739 -30425814 - MER67D LTR ERV1 0 514 369 2469 119 8 16 chr17 59078739 59079117 -30425436 - THE1C LTR MaLR 0 375 1 2091 189 42 59 chr17 59079117 59079495 -30425058 - MER67D LTR ERV1 -145 369 1 198 0 0 0 chr17 59080205 59080227 -30424326 + (A)n Simple_repeat Simple_repeat 1 22 0 239 293 104 9 chr17 59083678 59083784 -30420769 - L2 LINE L2 -18 3254 3139 1681 179 51 20 chr17 59083786 59084139 -30420414 + MLT1A1 LTR MaLR 2 365 0 44 35 0 0 chr17 59084527 59084585 -30419968 + AT_rich Low_complexity Low_complexity 1 58 0 317 345 22 13 chr17 59084696 59084879 -30419674 - L1MC/D LINE L1 -582 5584 5447 768 278 146 67 chr17 59084935 59085844 -30418709 - L1MC/D LINE L1 -800 5346 4366 785 307 100 43 chr17 59085871 59086383 -30418170 - L1MC/D LINE L1 -1822 4324 3784 221 182 23 0 chr17 59086394 59086438 -30418115 + (CA)n Simple_repeat Simple_repeat 1 45 0 988 257 54 42 chr17 59086601 59087009 -30417544 + MER57B LTR ERV1 1 413 -21 3633 152 37 59 chr17 59087534 59088336 -30416217 - LTR1 LTR ERV1 0 785 1 747 189 0 78 chr17 59088353 59088533 -30416020 - MER5A DNA MER1_type -23 166 1 1850 154 4 0 chr17 59091172 59091452 -30413101 + AluJb SINE Alu 15 295 -17 5598 66 19 7 chr17 59092594 59093351 -30411202 - MER4E LTR ERV1 0 766 1 1160 183 0 50 chr17 59093396 59093636 -30410917 - AluJb SINE Alu 0 312 85 2133 108 0 0 chr17 59094313 59094638 -30409915 - AluSc SINE Alu 0 327 3 398 286 15 38 chr17 59094641 59094774 -30409779 - MIR SINE MIR -110 152 23 958 283 108 51 chr17 59095269 59095961 -30408592 + L2 LINE L2 2564 3312 -1 182 344 0 104 chr17 59096190 59096315 -30408238 - L2 LINE L2 -12 3260 3149 22 0 0 0 chr17 59097583 59097605 -30406948 + AT_rich Low_complexity Low_complexity 1 22 0 1933 227 16 83 chr17 59098024 59098115 -30406438 + LTR40a LTR ERVL 1 96 -423 2224 98 0 0 chr17 59098115 59098410 -30406143 - AluSc SINE Alu -14 295 1 1933 227 16 83 chr17 59098410 59098874 -30405679 + LTR40a LTR ERVL 96 519 0 460 320 144 53 chr17 59099243 59099295 -30405258 + L2 LINE L2 2854 2900 -413 884 40 97 0 chr17 59099295 59099419 -30405134 - MER85 DNA T2_type 0 139 4 460 320 144 53 chr17 59099419 59099782 -30404771 + L2 LINE L2 2900 3307 -6 34 65 0 0 chr17 59099822 59099884 -30404669 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr17 59100146 59100173 -30404380 + (CA)n Simple_repeat Simple_repeat 1 27 0 1896 155 0 0 chr17 59100955 59101239 -30403314 - AluJo SINE Alu -22 290 7 302 214 43 0 chr17 59101419 59101489 -30403064 + MER94 DNA DNA 1 73 -61 848 315 43 51 chr17 59101489 59101705 -30402848 + L2 LINE L2 2478 2694 -619 1561 187 30 0 chr17 59101705 59101973 -30402580 + AluJb SINE Alu 3 278 -34 198 0 0 0 chr17 59101978 59102000 -30402553 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 848 315 43 51 chr17 59102000 59102512 -30402041 + L2 LINE L2 2698 3199 -114 9130 105 10 12 chr17 59102512 59103801 -30400752 - HSMAR1 DNA Mariner -1 1286 1 848 315 43 51 chr17 59103801 59103916 -30400637 + L2 LINE L2 3199 3313 0 229 286 120 0 chr17 59103987 59104120 -30400433 - L1MCc LINE L1 -4961 1462 1314 231 204 0 0 chr17 59106143 59106197 -30398356 + CT-rich Low_complexity Low_complexity 1 54 0 2313 239 143 71 chr17 59106515 59107557 -30396996 + LTR28 LTR ERV1 1 636 0 425 287 159 44 chr17 59107569 59107959 -30396594 - MLT1L LTR MaLR -9 606 172 761 184 12 24 chr17 59108356 59108524 -30396029 - LTR28 LTR ERV1 -854 166 1 196 259 78 69 chr17 59109154 59109270 -30395283 - MIR SINE MIR -135 127 11 23 68 0 0 chr17 59109593 59109637 -30394916 + AT_rich Low_complexity Low_complexity 1 44 0 495 307 26 31 chr17 59110531 59110789 -30393764 + MLT1H LTR MaLR 218 533 -16 439 200 42 0 chr17 59111215 59111310 -30393243 + MER53 DNA DNA 4 102 -87 454 246 42 129 chr17 59111742 59112214 -30392339 - L1ME4a LINE L1 -3 6118 5688 191 286 154 0 chr17 59112553 59112644 -30391909 - L2 LINE L2 0 3313 3209 444 274 0 42 chr17 59113433 59113601 -30390952 - MLT1H LTR MaLR -285 264 104 509 70 0 0 chr17 59114366 59114437 -30390116 - L1PA13 LINE L1 -4 6159 6089 21 36 0 0 chr17 59114488 59114516 -30390037 + AT_rich Low_complexity Low_complexity 1 28 0 1524 223 100 11 chr17 59115190 59115540 -30389013 + MLT2B1 LTR ERVL 2 382 -138 410 147 0 13 chr17 59115561 59115636 -30388917 + THE1-int LTR MaLR 174 247 -1333 326 167 0 0 chr17 59115673 59115721 -30388832 - MLT2B1 LTR ERVL -174 346 299 253 188 29 0 chr17 59115697 59115766 -30388787 + LTR66 LTR ERVL 369 439 -171 * 213 39 0 0 chr17 59115833 59115859 -30388694 + (TG)n Simple_repeat Simple_repeat 1 26 0 759 194 154 11 chr17 59115908 59116180 -30388373 + MSTB LTR MaLR 18 428 0 895 115 7 0 chr17 59116180 59116319 -30388234 + MSTB-int LTR MaLR 1 140 -1511 * 1172 205 0 0 chr17 59116317 59116541 -30388012 + MSTB-int LTR MaLR 312 535 -1116 1262 149 134 15 chr17 59116541 59116809 -30387744 - MSTA LTR MaLR -128 300 1 * 8016 134 12 2 chr17 59116809 59118053 -30386500 + Tigger1 DNA MER2_type 1160 2415 -3 342 0 0 0 chr17 59118054 59118092 -30386461 + (TG)n Simple_repeat Simple_repeat 1 38 0 405 70 0 0 chr17 59118092 59118149 -30386404 + (GA)n Simple_repeat Simple_repeat 2 58 0 1423 227 0 3 chr17 59119905 59120187 -30384366 - AluJo SINE Alu -31 281 1 2091 162 66 25 chr17 59120956 59121493 -30383060 - MLT2A2 LTR ERVL 0 554 1 356 279 36 71 chr17 59121523 59121663 -30382890 - MIR SINE MIR -85 177 43 805 263 89 56 chr17 59123283 59123674 -30380879 + MLT1I LTR MaLR 4 407 -2 536 234 170 7 chr17 59124793 59124934 -30379619 - MER5A DNA MER1_type -6 183 20 394 302 17 9 chr17 59124951 59125067 -30379486 - MIR SINE MIR -134 128 12 2052 104 61 0 chr17 59125632 59125912 -30378641 + AluSg SINE Alu 1 297 -13 552 300 16 16 chr17 59126364 59126554 -30377999 + L2 LINE L2 2575 2764 -550 333 247 0 12 chr17 59126576 59126657 -30377896 + MER5B DNA MER1_type 8 87 -91 269 390 48 0 chr17 59127127 59127232 -30377321 + L2 LINE L2 3136 3245 -27 918 272 26 4 chr17 59127311 59127539 -30377014 - MER97a DNA MER1_type? -661 233 1 997 224 126 40 chr17 59128225 59128573 -30375980 - L2 LINE L2 0 3313 2936 4760 90 2 5 chr17 59128866 59129502 -30375051 + L1PA12 LINE L1 5461 6094 -74 15149 185 58 49 chr17 59129503 59133576 -30370977 + HERVH LTR ERV1 1914 6021 -1692 3573 124 11 9 chr17 59133564 59134120 -30370433 + HERVH LTR ERV1 7157 7713 0 * 1692 157 135 30 chr17 59134120 59134527 -30370026 + LTR7 LTR ERV1 1 450 0 384 78 78 16 chr17 59134527 59134591 -30369962 + L1PA13 LINE L1 6096 6163 0 302 241 48 0 chr17 59135017 59135100 -30369453 - MER103 DNA DNA -44 122 36 189 322 70 9 chr17 59135411 59135526 -30369027 - MIR SINE MIR -44 218 97 5400 159 53 8 chr17 59135532 59136597 -30367956 + L1PBa LINE L1 3 1157 -5706 3411 148 7 2 chr17 59136601 59137141 -30367412 + L1PBa LINE L1 1311 1853 -5010 195 185 111 0 chr17 59137690 59137744 -30366809 + MER5A DNA MER1_type 80 139 -50 2818 79 22 5 chr17 59137751 59138119 -30366434 - L1PA11 LINE L1 -1 6173 5800 2023 75 4 0 chr17 59138350 59138602 -30365951 - AluY SINE Alu -58 253 1 1147 260 120 20 chr17 59138606 59139006 -30365547 - MLT1J LTR MaLR -71 440 1 394 289 95 37 chr17 59139182 59139372 -30365181 - MIR SINE MIR 0 262 62 202 111 83 0 chr17 59139678 59139714 -30364839 - MIR SINE MIR -113 149 111 2326 102 0 0 chr17 59140333 59140636 -30363917 - AluSx SINE Alu -7 305 3 352 180 281 36 chr17 59140971 59141110 -30363443 - L2 LINE L2 -9 3263 3091 632 239 23 93 chr17 59141594 59141853 -30362700 + L2 LINE L2 3073 3313 0 1197 99 6 39 chr17 59142057 59142239 -30362314 - AluSg/x SINE Alu 0 312 137 2358 89 0 35 chr17 59142239 59142553 -30362000 - AluSq SINE Alu -10 303 1 1890 157 7 0 chr17 59144513 59144812 -30359741 - AluSx SINE Alu -7 305 5 744 186 0 0 chr17 59145094 59145212 -30359341 - AluJb SINE Alu -14 298 181 313 339 63 0 chr17 59145444 59145571 -30358982 + L2 LINE L2 2415 2549 -765 252 264 140 81 chr17 59145673 59146108 -30358445 + L1MC4a LINE L1 6055 6515 -1293 1034 206 25 5 chr17 59146148 59146347 -30358206 + L1MC4a LINE L1 6620 6822 -986 21 0 0 0 chr17 59146494 59146515 -30358038 + AT_rich Low_complexity Low_complexity 1 21 0 1502 181 67 117 chr17 59146662 59147259 -30357294 - LTR49 LTR ERV1 -24 571 5 246 121 0 0 chr17 59147230 59147263 -30357290 - MER34B LTR ERV1 -532 33 1 * 31 0 0 0 chr17 59147507 59147538 -30357015 + AT_rich Low_complexity Low_complexity 1 31 0 904 133 0 0 chr17 59147579 59147699 -30356854 - FLAM_C SINE Alu -11 122 3 1144 175 47 0 chr17 59147906 59148136 -30356417 + L1M4c LINE L1 1583 1875 -4507 958 181 63 23 chr17 59148637 59148858 -30355695 + L1PB4 LINE L1 5922 6151 -5 1269 134 31 0 chr17 59148871 59149095 -30355458 + L1MCa LINE L1 1061 1291 -5135 293 91 55 18 chr17 59149077 59149132 -30355421 + L1M4c LINE L1 1855 1911 -4471 * 262 275 130 0 chr17 59149290 59149359 -30355194 + MIR3 SINE MIR 104 181 -27 247 331 34 46 chr17 59149394 59149569 -30354984 + L3 LINE CR1 1299 1471 -106 210 332 37 24 chr17 59149651 59149753 -30354800 + MIR SINE MIR 1 108 -100 41 66 0 0 chr17 59149792 59149868 -30354685 + AT_rich Low_complexity Low_complexity 1 76 0 252 325 50 33 chr17 59150357 59150477 -30354076 - L2 LINE L2 -183 3089 2968 1295 193 91 30 chr17 59150677 59151008 -30353545 + L1MD2 LINE L1 6008 6358 -1 4321 72 44 5 chr17 59151180 59151793 -30352760 + L1PB1 LINE L1 1967 2603 -4260 13728 176 17 6 chr17 59201794 59205334 -30299219 + L1PB1 LINE L1 2921 6513 -354 510 61 0 0 chr17 59205334 59205400 -30299153 + (TA)n Simple_repeat Simple_repeat 2 67 0 13728 176 17 6 chr17 59205400 59205759 -30298794 + L1PB1 LINE L1 6513 6866 -1 30 45 0 0 chr17 59205759 59205803 -30298750 + AT_rich Low_complexity Low_complexity 1 44 0 228 304 98 20 chr17 59205803 59205905 -30298648 - MIR SINE MIR -152 110 1 300 111 0 0 chr17 59206481 59206526 -30298027 + (CA)n Simple_repeat Simple_repeat 2 46 0 762 279 25 0 chr17 59206839 59207066 -30297487 + MIR SINE MIR 30 262 0 283 348 34 0 chr17 59207943 59208032 -30296521 + MIR SINE MIR 24 115 -147 268 331 126 36 chr17 59208034 59208301 -30296252 - L3 LINE CR1 -103 1474 1180 1974 161 0 10 chr17 59208301 59208605 -30295948 - AluJo SINE Alu -11 301 1 191 88 29 0 chr17 59208706 59208740 -30295813 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 2209 97 7 0 chr17 59210195 59210473 -30294080 + AluSq SINE Alu 9 288 -25 1167 48 0 0 chr17 59210473 59210619 -30293934 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 213 39 0 0 chr17 59210618 59210644 -30293909 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 * 248 327 10 50 chr17 59210665 59210766 -30293787 - L2 LINE L2 -42 3230 3134 939 210 0 0 chr17 59211110 59211272 -30293281 + AluJb SINE Alu 135 296 -16 22 0 0 0 chr17 59211415 59211437 -30293116 + AT_rich Low_complexity Low_complexity 1 22 0 701 181 24 16 chr17 59211845 59211972 -30292581 - FLAM_C SINE Alu -2 131 4 314 281 30 24 chr17 59212836 59212855 -30291698 - L1MA10 LINE L1 -1 6333 6315 672 276 50 23 chr17 59212855 59213116 -30291437 - L1ME2 LINE L1 -9 6155 5888 * 1935 253 83 48 chr17 59213115 59213151 -30291402 - L1ME LINE L1 -4818 1262 1229 2145 126 59 8 chr17 59213151 59213508 -30291045 - THE1C LTR MaLR 0 375 1 1935 253 83 48 chr17 59213508 59214713 -30289840 - L1ME LINE L1 -4851 1229 6 559 282 40 6 chr17 59215349 59215523 -30289030 + MIR SINE MIR 83 262 0 481 323 9 53 chr17 59215478 59215704 -30288849 - MIR SINE MIR -32 230 15 * 675 334 116 15 chr17 59216419 59216823 -30287730 - L3 LINE CR1 -167 1410 966 22 0 0 0 chr17 59216879 59216901 -30287652 + AT_rich Low_complexity Low_complexity 1 22 0 17026 122 13 99 chr17 59216936 59220598 -30283955 + L1P LINE L1 2 3347 -2799 931 129 98 149 chr17 59220598 59220893 -30283660 + LTR12 LTR ERV1 6 285 -429 298 236 11 0 chr17 59220894 59220983 -30283570 + LTR30 LTR ERV1 553 642 -80 619 155 10 0 chr17 59220985 59221088 -30283465 + LTR12 LTR ERV1 481 584 -130 6271 139 6 16 chr17 59221108 59222176 -30282377 + HERV9 LTR ERV1 58 1114 -7285 6686 68 9 3 chr17 59222188 59223289 -30281264 + L1PA7 LINE L1 5048 6152 -2 234 0 0 0 chr17 59223900 59223926 -30280627 + (CA)n Simple_repeat Simple_repeat 2 27 0 192 308 22 22 chr17 59224749 59224840 -30279713 + L3 LINE CR1 1328 1418 -159 288 347 54 24 chr17 59224978 59225145 -30279408 + MER5A DNA MER1_type 12 183 -6 1903 133 28 5 chr17 59225937 59226257 -30278296 + THE1C LTR MaLR 1 355 0 406 383 23 6 chr17 59226548 59226723 -30277830 + MIR3 SINE MIR 19 196 -12 357 321 101 34 chr17 59227047 59227454 -30277099 + L1ME LINE L1 4591 5034 -1112 841 293 16 6 chr17 59227823 59228134 -30276419 + L1ME LINE L1 5348 5661 -2147 332 297 4 0 chr17 59228144 59228273 -30276280 + L1ME LINE L1 5704 5838 -299 6638 58 8 0 chr17 59229286 59230624 -30273929 - L1PA8 LINE L1 -6 6166 4811 265 301 81 24 chr17 59230752 59230875 -30273678 - MIR SINE MIR -110 152 23 656 275 6 0 chr17 59231227 59231398 -30273155 + MLT1B LTR MaLR 2 173 -217 684 87 0 0 chr17 59231459 59231551 -30273002 + L1PA8 LINE L1 6028 6119 -53 1036 60 146 0 chr17 59231564 59231715 -30272838 - L1PA8 LINE L1 -252 5920 5748 1101 151 22 0 chr17 59231715 59231894 -30272659 + MLT1B LTR MaLR 206 388 -2 27 62 0 0 chr17 59233818 59233866 -30270687 + AT_rich Low_complexity Low_complexity 1 48 0 2559 144 7 29 chr17 59233869 59234313 -30270240 + MER57B LTR ERV1 1 434 0 3682 175 50 6 chr17 59234313 59234976 -30269577 + MER57B-int LTR ERV1 1 692 -6845 * 7068 136 55 33 chr17 59234964 59235779 -30268774 + MER57B-int LTR ERV1 298 1094 -5630 1889 99 10 61 chr17 59235779 59236073 -30268480 - AluSq SINE Alu -19 294 16 7068 136 55 33 chr17 59236073 59236241 -30268312 + MER57B-int LTR ERV1 1094 1257 -5467 225 0 0 0 chr17 59236241 59236266 -30268287 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7068 136 55 33 chr17 59236266 59238268 -30266285 + MER57B-int LTR ERV1 1257 5004 -1720 859 113 27 27 chr17 59238267 59238417 -30266136 + MER57B-int LTR ERV1 5249 5398 -2139 * 569 58 0 0 chr17 59238460 59238546 -30266007 + L1P LINE L1 3222 3307 -2839 2083 125 3 0 chr17 59238546 59238841 -30265712 + MER57B-int LTR ERV1 6852 7147 -390 652 163 24 8 chr17 59238841 59238964 -30265589 + LTR54B LTR ERV1 3 127 -371 1437 92 171 4 chr17 59238964 59239192 -30265361 + MER57B-int LTR ERV1 7272 7537 0 2459 150 16 2 chr17 59239193 59239620 -30264933 + MER57B LTR ERV1 2 434 0 2133 129 0 3 chr17 59239745 59240055 -30264498 + AluSc SINE Alu 1 309 0 1213 258 243 5 chr17 59240159 59240794 -30263759 - L2 LINE L2 -241 3072 2295 1219 184 72 72 chr17 59240811 59241115 -30263438 + MER67D LTR ERV1 1 304 -210 205 300 0 0 chr17 59241180 59241230 -30263323 - L2 LINE L2 -1046 2268 2219 1930 177 44 28 chr17 59241452 59241882 -30262671 + LTR23 LTR ERV1 1 437 0 26 0 0 0 chr17 59242360 59242386 -30262167 + AT_rich Low_complexity Low_complexity 1 26 0 25837 111 11 17 chr17 59243580 59247531 -30257022 - L1P LINE L1 -2207 3939 11 194 375 21 56 chr17 59247645 59247789 -30256764 + MER5A DNA MER1_type 13 151 -38 395 358 43 0 chr17 59248035 59248197 -30256356 - MIR3 SINE MIR -12 196 28 510 289 100 11 chr17 59248705 59248895 -30255658 + L2 LINE L2 1825 2031 -1283 1282 155 78 16 chr17 59248898 59249143 -30255410 + MLT2D LTR ERVL 1 260 -154 457 297 138 0 chr17 59249493 59249631 -30254922 + MER5A DNA MER1_type 10 166 -23 349 294 88 62 chr17 59249750 59249944 -30254609 - MIR SINE MIR -40 222 24 476 318 41 32 chr17 59250271 59250491 -30254062 + MIR SINE MIR 40 261 -1 320 259 35 12 chr17 59250493 59250578 -30253975 + MIR3 SINE MIR 105 191 -17 2354 61 0 24 chr17 59251602 59251882 -30252671 + AluSg SINE Alu 1 275 -35 356 0 23 0 chr17 59251882 59251926 -30252627 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 2354 61 0 24 chr17 59251926 59251938 -30252615 + AluSg SINE Alu 275 286 -24 195 377 0 26 chr17 59252294 59252371 -30252182 - MIR SINE MIR -184 78 4 3155 216 58 11 chr17 59252397 59253297 -30251256 + Charlie1 DNA MER1_type 1820 2761 0 242 304 78 10 chr17 59253310 59253412 -30251141 + L1M4 LINE L1 4735 4843 -1303 1176 282 49 15 chr17 59253456 59253846 -30250707 - LTR33 LTR ERVL 0 521 119 356 326 59 7 chr17 59253957 59254092 -30250461 - ERVL LTR ERVL -2235 3529 3388 1022 215 148 43 chr17 59254159 59254484 -30250069 + MLT1A1 LTR MaLR 7 365 0 377 300 47 13 chr17 59254612 59254762 -30249791 - ERVL LTR ERVL -4011 1753 1599 320 282 176 6 chr17 59254762 59254932 -30249621 + L1ME LINE L1 691 889 -5181 346 302 47 23 chr17 59255153 59255325 -30249228 - HAL1 LINE L1 -615 1892 1717 1851 164 0 10 chr17 59255360 59255658 -30248895 - AluJo SINE Alu -17 295 1 259 230 30 135 chr17 59255744 59255944 -30248609 - L1MDa LINE L1 -4853 1227 1049 323 246 106 63 chr17 59256079 59256286 -30248267 - L1MDa LINE L1 -5217 853 638 1373 272 123 48 chr17 59256902 59257857 -30246696 - HAL1 LINE L1 -882 1625 600 966 314 97 2 chr17 59257925 59258348 -30246205 - HAL1 LINE L1 -2044 463 1 2103 109 0 3 chr17 59258724 59259042 -30245511 + AluSx SINE Alu 1 317 0 2205 104 10 0 chr17 59261164 59261461 -30243092 + AluSp SINE Alu 1 300 -13 382 267 220 0 chr17 59262387 59262537 -30242016 + MIR SINE MIR 36 218 -44 312 302 54 23 chr17 59262537 59262666 -30241887 + MIR SINE MIR 128 260 -2 271 295 98 12 chr17 59262781 59262954 -30241599 - L1ME LINE L1 -364 5757 5570 2039 145 3 3 chr17 59263164 59263467 -30241086 + AluSq SINE Alu 1 303 -10 198 281 42 42 chr17 59263597 59263693 -30240860 - L3 LINE CR1 -373 1204 1109 841 253 86 0 chr17 59264262 59264448 -30240105 + MER63A DNA MER1_type 7 208 -2 207 333 0 0 chr17 59265572 59265647 -30238906 - MIR SINE MIR -4 258 184 209 252 36 81 chr17 59265796 59265907 -30238646 - MER5A DNA MER1_type -73 116 11 347 290 120 37 chr17 59266280 59266497 -30238056 + MIR SINE MIR 19 253 -9 272 168 62 62 chr17 59267155 59267334 -30237219 + (TA)n Simple_repeat Simple_repeat 2 180 0 274 163 47 39 chr17 59267390 59267519 -30237034 + (TA)n Simple_repeat Simple_repeat 2 131 0 * 320 291 29 11 chr17 59267480 59267655 -30236898 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 * 496 246 11 6 chr17 59267536 59267777 -30236776 + (TA)n Simple_repeat Simple_repeat 1 242 0 285 276 112 10 chr17 59267828 59267926 -30236627 - MER5B DNA MER1_type -69 109 2 1361 211 19 72 chr17 59267998 59268373 -30236180 - MLT1A2 LTR MaLR -15 359 5 245 196 18 18 chr17 59269184 59269240 -30235313 + (TG)n Simple_repeat Simple_repeat 1 56 0 345 24 0 0 chr17 59269423 59269465 -30235088 + (CA)n Simple_repeat Simple_repeat 2 43 0 229 284 124 20 chr17 59271258 59271377 -30233176 + MIR SINE MIR 37 145 -63 768 244 60 84 chr17 59272466 59272716 -30231837 - MIR SINE MIR -13 249 6 391 340 42 37 chr17 59272905 59273146 -30231407 - MIR SINE MIR -14 248 7 181 400 109 0 chr17 59273292 59273402 -30231151 - L2 LINE L2 -15 3257 3136 230 329 0 13 chr17 59274369 59274448 -30230105 - MLT1L LTR MaLR -324 291 214 1615 246 31 41 chr17 59274821 59275329 -30229224 + MLT1D LTR MaLR 1 503 -2 349 306 94 6 chr17 59277467 59277637 -30226916 - MIR SINE MIR -3 259 75 862 94 8 0 chr17 59277789 59277906 -30226647 - THE1B LTR MaLR 0 364 247 243 374 11 0 chr17 59277907 59277998 -30226555 + MIR3 SINE MIR 102 193 -15 949 208 56 14 chr17 59278336 59278552 -30226001 + Charlie1 DNA MER1_type 3 227 -2534 523 259 7 7 chr17 59278549 59278688 -30225865 + Charlie1 DNA MER1_type 2623 2761 0 * 1667 198 96 3 chr17 59278715 59279049 -30225504 - MLT1A1 LTR MaLR 0 365 1 233 243 15 96 chr17 59279288 59279424 -30225129 - MER104 DNA Tc2 -9 171 47 1983 114 7 40 chr17 59279486 59279785 -30224768 - AluSx SINE Alu -23 289 1 2585 100 17 0 chr17 59280005 59280365 -30224188 - L1PA10 LINE L1 -359 5809 5444 2177 110 59 3 chr17 59280365 59280708 -30223845 + L1PA10 LINE L1 5793 6166 -2 27 0 0 0 chr17 59280715 59280742 -30223811 + AT_rich Low_complexity Low_complexity 1 27 0 406 328 28 17 chr17 59282256 59282433 -30222120 - MIR SINE MIR -50 212 34 398 291 120 19 chr17 59282616 59282774 -30221779 - MIR SINE MIR -11 251 78 803 192 4 100 chr17 59282855 59283038 -30221515 + MER33 DNA MER1_type 1 157 -2428 1971 68 4 0 chr17 59283038 59283288 -30221265 - L1PA8 LINE L1 -10 6162 5912 803 192 4 100 chr17 59283288 59283344 -30221209 + MER33 DNA MER1_type 157 217 -107 1586 193 29 32 chr17 59283344 59283686 -30220867 + Tigger1 DNA MER2_type 1 341 -2077 349 77 19 0 chr17 59283684 59283736 -30220817 + Tigger1 DNA MER2_type 840 892 -1526 * 9263 119 17 27 chr17 59283836 59284960 -30219593 + Tigger1 DNA MER2_type 940 2047 -371 2446 88 0 0 chr17 59284960 59285266 -30219287 + AluSg SINE Alu 1 306 -4 9263 119 17 27 chr17 59285266 59285635 -30218918 + Tigger1 DNA MER2_type 2047 2418 0 896 264 67 39 chr17 59285642 59285998 -30218555 + MER110A-int LTR ERV1 4279 4644 -3 259 164 148 0 chr17 59286070 59286131 -30218422 + MER110A LTR ERV1 1 70 -398 609 289 55 55 chr17 59286292 59286414 -30218139 + MER110 LTR ERV1 201 322 -169 1906 148 0 0 chr17 59286414 59286737 -30217816 + AluSx SINE Alu 1 323 0 609 289 55 55 chr17 59286737 59286902 -30217651 + MER110 LTR ERV1 321 491 0 350 191 162 29 chr17 59287066 59287171 -30217382 + Charlie8 DNA MER1_type 78 196 -2221 820 214 0 0 chr17 59287257 59287411 -30217142 - MER58A DNA MER1_type -25 199 46 1416 205 4 0 chr17 59288043 59288302 -30216251 + AluJo SINE Alu 1 260 -52 359 295 145 44 chr17 59289744 59289971 -30214582 - MIR SINE MIR 0 262 13 519 113 9 35 chr17 59290162 59290277 -30214276 + L1MA7 LINE L1 6180 6291 0 345 304 17 9 chr17 59292227 59292342 -30212211 + MIR SINE MIR 91 206 -56 228 273 0 0 chr17 59292566 59292643 -30211910 + CT-rich Low_complexity Low_complexity 3 79 0 583 264 47 31 chr17 59292863 59293056 -30211497 + MIR SINE MIR 57 252 -10 905 307 81 29 chr17 59293178 59294092 -30210461 - L1ME3A LINE L1 -238 5932 4979 25679 140 15 14 chr17 59294263 59300394 -30204159 - L1PA8A LINE L1 -5 6441 259 373 200 0 30 chr17 59300396 59300496 -30204057 - MER6 DNA MER2_type -434 431 335 1444 126 40 0 chr17 59300496 59300718 -30203835 - L1PA8A LINE L1 -5643 232 2 357 178 10 20 chr17 59300722 59300738 -30203815 + (TA)n Simple_repeat Simple_repeat 2 17 -84 4266 172 52 20 chr17 59300738 59301576 -30202977 - MER6 DNA MER2_type 0 865 1 357 178 10 20 chr17 59301576 59301660 -30202893 + (TA)n Simple_repeat Simple_repeat 17 101 0 243 333 15 0 chr17 59302097 59302163 -30202390 + L2 LINE L2 3247 3313 0 663 269 98 19 chr17 59303516 59303772 -30200781 - LTR16A1 LTR ERVL 0 457 182 292 222 40 71 chr17 59303792 59303891 -30200662 + LTR48B LTR ERV1 6 101 -543 * 987 220 131 62 chr17 59303864 59304283 -30200270 + MER39 LTR ERV1 260 707 0 251 310 23 35 chr17 59304306 59304393 -30200160 - LTR16A1 LTR ERVL -312 145 60 28 29 0 0 chr17 59305381 59305416 -30199137 + AT_rich Low_complexity Low_complexity 1 35 0 260 342 83 33 chr17 59305906 59306127 -30198426 - MIR SINE MIR 0 262 19 1923 223 55 32 chr17 59306326 59306886 -30197667 + MER90 LTR ERV1 1 573 -2 768 206 7 7 chr17 59306968 59307114 -30197439 - MER58B DNA MER1_type -1 340 195 296 167 0 0 chr17 59307580 59307628 -30196925 - Tigger1 DNA MER2_type -2370 48 1 2047 279 97 66 chr17 59307631 59308865 -30195688 - MER110-int LTR ERV1 -376 4271 2999 1717 249 3 5 chr17 59308870 59309247 -30195306 - MER82 DNA MER2_type -1 652 277 1757 238 13 47 chr17 59309247 59309781 -30194772 + MER65B LTR ERV1 1 516 -15 1226 198 50 4 chr17 59309800 59310058 -30194495 - MER82 DNA MER2_type -383 270 1 194 170 43 0 chr17 59310789 59310883 -30193670 + (TA)n Simple_repeat Simple_repeat 2 99 0 1814 115 9 96 chr17 59311938 59312260 -30192293 + AluSx SINE Alu 5 298 -14 2197 118 0 7 chr17 59312660 59312966 -30191587 - AluSx SINE Alu -8 304 1 25 83 0 0 chr17 59313041 59313101 -30191452 + AT_rich Low_complexity Low_complexity 1 60 0 6252 91 21 11 chr17 59313311 59313903 -30190650 - L1PA11 LINE L1 -1 6173 5589 1786 155 4 7 chr17 59313903 59314180 -30190373 - AluSx SINE Alu -36 276 1 6252 91 21 11 chr17 59314180 59314857 -30189696 - L1PA11 LINE L1 -585 5589 4926 521 183 0 19 chr17 59315094 59315223 -30189330 - L1P LINE L1 -1094 5052 4926 33 0 0 0 chr17 59315707 59315740 -30188813 + AT_rich Low_complexity Low_complexity 1 33 0 1982 179 38 30 chr17 59316249 59316795 -30187758 - MLT2A2 LTR ERVL 0 554 1 777 306 71 6 chr17 59316814 59317138 -30187415 + MLT1G1 LTR MaLR 241 585 -10 10550 188 88 11 chr17 59317194 59319206 -30185347 + L1MA2 LINE L1 17 2183 -5382 * 12414 160 27 74 chr17 59319175 59321766 -30182787 + L1MA2 LINE L1 3421 5697 -2026 2439 67 0 3 chr17 59321766 59322066 -30182487 + AluY SINE Alu 1 299 -12 12414 160 27 74 chr17 59322066 59324002 -30180551 + L1MA2 LINE L1 5697 7723 0 3051 230 34 21 chr17 59324010 59324901 -30179652 + L1M4 LINE L1 4109 5010 -1136 1230 189 20 138 chr17 59324915 59325366 -30179187 + L1MB3 LINE L1 4855 5252 -894 * 2945 224 81 54 chr17 59325365 59326096 -30178457 + L1P3 LINE L1 385 1290 -5171 189 74 0 0 chr17 59326096 59326123 -30178430 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2945 224 81 54 chr17 59326123 59326401 -30178152 + L1P3 LINE L1 1290 1559 -4902 3740 103 0 2 chr17 59326406 59326932 -30177621 + L1PA10 LINE L1 5629 6153 -15 3023 163 33 0 chr17 59326944 59327490 -30177063 + L1MB3 LINE L1 5593 6156 -27 618 122 38 38 chr17 59327494 59327625 -30176928 + L1MB2 LINE L1 6039 6169 -2 2339 266 91 69 chr17 59327878 59329135 -30175418 + L1M4 LINE L1 26 1309 -5233 5936 156 20 4 chr17 59329165 59330534 -30174019 - L1MA5 LINE L1 -2 7319 5927 6464 211 29 22 chr17 59330549 59331371 -30173182 - L1MA5 LINE L1 -2278 4889 4075 2252 117 0 0 chr17 59331371 59331671 -30172882 - AluSg SINE Alu -10 300 1 6464 211 29 22 chr17 59331671 59332671 -30171882 - L1MA5 LINE L1 -3092 4075 3084 338 22 43 0 chr17 59332671 59332717 -30171836 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 6464 211 29 22 chr17 59332717 59333781 -30170772 - L1MA5 LINE L1 -4083 3084 1980 3216 164 3 31 chr17 59333928 59334531 -30170022 - LTR60 LTR ERV1 0 586 1 7076 161 17 212 chr17 59334531 59336971 -30167582 - L1MA5 LINE L1 -5192 1976 13 2994 217 74 86 chr17 59336972 59337673 -30166880 + L1M4 LINE L1 1301 2009 -4635 1842 23 0 9 chr17 59337673 59337892 -30166661 + L1PA3 LINE L1 5938 6154 -1 2994 217 74 86 chr17 59337892 59339120 -30165433 + L1M4 LINE L1 2009 3214 -3430 24 53 0 0 chr17 59339491 59339529 -30165024 + AT_rich Low_complexity Low_complexity 1 38 0 226 313 0 0 chr17 59339831 59339914 -30164639 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 22 0 0 0 chr17 59340071 59340093 -30164460 + AT_rich Low_complexity Low_complexity 1 22 0 239 325 63 25 chr17 59340666 59341095 -30163458 + L2 LINE L2 2170 2755 -559 400 156 22 44 chr17 59341097 59341187 -30163366 + L1MA9 LINE L1 5526 5613 -721 23 33 0 0 chr17 59341187 59341217 -30163336 + AT_rich Low_complexity Low_complexity 1 30 0 2617 158 41 18 chr17 59341217 59341768 -30162785 + L1MA9 LINE L1 5594 6257 -55 22 0 0 0 chr17 59341806 59341828 -30162725 + AT_rich Low_complexity Low_complexity 1 22 0 193 411 21 7 chr17 59341895 59342036 -30162517 + L2 LINE L2 2813 2955 -317 679 294 12 75 chr17 59343482 59343734 -30160819 - L2 LINE L2 -1019 2295 2060 2794 265 88 58 chr17 59343741 59344940 -30159613 - L2 LINE L2 -1755 1559 326 22 35 0 0 chr17 59345136 59345165 -30159388 + AT_rich Low_complexity Low_complexity 1 29 0 809 168 0 0 chr17 59345221 59345346 -30159207 + FLAM_C SINE Alu 1 125 -18 2044 112 11 14 chr17 59345435 59345763 -30158790 + AluSq SINE Alu 3 329 0 21 0 0 0 chr17 59345802 59345823 -30158730 + AT_rich Low_complexity Low_complexity 1 21 0 2242 96 13 0 chr17 59346074 59346376 -30158177 + AluY SINE Alu 1 306 -5 1355 221 152 0 chr17 59346446 59346781 -30157772 + MLT1D LTR MaLR 120 505 0 587 289 72 61 chr17 59346781 59347127 -30157426 - L2 LINE L2 -430 2884 2535 225 225 200 0 chr17 59347127 59347207 -30157346 + LTR33 LTR ERVL 1 96 -425 519 235 126 30 chr17 59347300 59347530 -30157023 + LTR33 LTR ERVL 258 509 -12 264 133 67 0 chr17 59347552 59347612 -30156941 - L2 LINE L2 -787 2527 2464 220 322 0 35 chr17 59348319 59348434 -30156119 + MIR SINE MIR 106 216 -46 612 181 78 60 chr17 59348490 59348656 -30155897 - MLT1B LTR MaLR -217 173 5 2289 108 31 19 chr17 59350496 59350856 -30153697 - THE1B LTR MaLR 0 364 1 11523 96 10 12 chr17 59350858 59352067 -30152486 - THE1B-int LTR MaLR -5 1575 368 2195 121 0 0 chr17 59352067 59352364 -30152189 + AluSg SINE Alu 1 297 -13 11523 96 10 12 chr17 59352364 59352732 -30151821 - THE1B-int LTR MaLR -1212 368 1 2271 128 19 25 chr17 59352732 59353098 -30151455 - THE1B LTR MaLR 0 364 1 189 296 96 24 chr17 59354055 59354180 -30150373 - L2 LINE L2 -37 3276 3143 1955 142 7 0 chr17 59354743 59355039 -30149514 + AluJo SINE Alu 1 298 -14 209 330 68 11 chr17 59355128 59355216 -30149337 - MER5B DNA MER1_type -60 118 26 248 93 47 0 chr17 59355877 59355920 -30148633 + CT-rich Low_complexity Low_complexity 2 46 0 236 308 26 0 chr17 59357079 59357157 -30147396 + MIR3 SINE MIR 114 193 -15 519 170 0 0 chr17 59357303 59357403 -30147150 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 288 53 0 0 chr17 59357402 59357440 -30147113 + (GA)n Simple_repeat Simple_repeat 2 39 0 * 348 272 96 25 chr17 59358115 59358273 -30146280 - L1ME3A LINE L1 0 6170 6000 19526 171 41 7 chr17 59358337 59361901 -30142652 + L1MA2 LINE L1 14 3705 -3860 826 218 66 5 chr17 59361982 59362179 -30142374 + L1PA12 LINE L1 4 212 -7369 15886 201 18 36 chr17 59362180 59366331 -30138222 + L1PA12 LINE L1 2476 6563 -1021 9705 180 15 11 chr17 59366324 59369147 -30135406 + L1MA2 LINE L1 4749 7723 0 * 31553 84 5 6 chr17 59369158 59374338 -30130215 - L1PA6 LINE L1 -11 6143 958 13550 79 7 5 chr17 59374338 59376639 -30127914 - HERVL-A1 LTR ERVL -3351 2303 1 396 99 0 42 chr17 59376639 59376710 -30127843 - MLT2A1 LTR ERVL 0 444 377 315 183 0 25 chr17 59376710 59376830 -30127723 + (TA)n Simple_repeat Simple_repeat 1 117 0 265 56 0 0 chr17 59376830 59376866 -30127687 - MLT2A1 LTR ERVL -13 431 396 217 184 13 13 chr17 59376884 59376960 -30127593 + (TA)n Simple_repeat Simple_repeat 2 77 0 241 130 0 0 chr17 59376968 59377014 -30127539 + L1MC4 LINE L1 6658 6703 -1339 319 289 0 0 chr17 59377015 59377098 -30127455 - L1MC4 LINE L1 -1342 6700 6618 3040 78 18 0 chr17 59377098 59377495 -30127058 - MLT2A1 LTR ERVL -40 404 1 2340 253 72 15 chr17 59377510 59378316 -30126237 + L1M4 LINE L1 3503 4354 -1792 1324 171 121 0 chr17 59378362 59378643 -30125910 + L1MC1 LINE L1 6014 6328 -5 711 206 98 29 chr17 59378696 59378973 -30125580 + L1M4 LINE L1 4428 4723 -1423 3807 175 64 22 chr17 59379355 59379648 -30124905 + L1MC3 LINE L1 6873 7152 -633 2136 138 33 28 chr17 59379648 59380010 -30124543 + THE1B LTR MaLR 1 364 0 3807 175 64 22 chr17 59380010 59380578 -30123975 + L1MC3 LINE L1 7152 7770 -15 2352 57 10 23 chr17 59381172 59381472 -30123081 + AluY SINE Alu 1 296 -15 243 281 0 0 chr17 59382925 59382982 -30121571 + MER5A DNA MER1_type 26 82 -107 1984 268 39 4 chr17 59383016 59383718 -30120835 - L1MDa LINE L1 -3245 3696 2971 333 207 0 0 chr17 59383706 59383788 -30120765 - L1MDa LINE L1 -5147 1794 1713 * 1019 243 9 5 chr17 59383790 59384008 -30120545 + MLT1F1 LTR MaLR 349 567 0 21 0 0 0 chr17 59384236 59384257 -30120296 + AT_rich Low_complexity Low_complexity 1 21 0 288 240 27 0 chr17 59385790 59385865 -30118688 - L1MDa LINE L1 -5083 1340 1264 1779 179 0 10 chr17 59386727 59387029 -30117524 + AluJo SINE Alu 2 300 -12 279 180 40 0 chr17 59387291 59387341 -30117212 + L2 LINE L2 3221 3272 0 1432 199 136 143 chr17 59387967 59388905 -30115648 + LTR1B LTR ERV1 8 1016 -4 648 309 192 32 chr17 59390076 59390419 -30114134 - L2 LINE L2 -1256 2058 1771 1494 218 151 60 chr17 59390419 59390915 -30113638 - MLT1F LTR MaLR 0 542 2 648 309 192 32 chr17 59390915 59391264 -30113289 - L2 LINE L2 -1543 1771 1255 477 353 92 27 chr17 59391267 59391559 -30112994 - L2 LINE L2 -2803 511 201 224 267 0 0 chr17 59392224 59392269 -30112284 + polypyrimidine Low_complexity Low_complexity 2 46 0 823 179 8 90 chr17 59392517 59392785 -30111768 + L1MC4 LINE L1 6457 6702 -1340 436 222 114 45 chr17 59392789 59392847 -30111706 + L1MC4a LINE L1 6594 6647 -1161 381 43 0 0 chr17 59392847 59392894 -30111659 + (TAGG)n Simple_repeat Simple_repeat 1 47 0 436 222 114 45 chr17 59392894 59393011 -30111542 + L1MC4a LINE L1 6647 6717 -1091 1403 200 25 11 chr17 59393156 59393436 -30111117 + L1M3e LINE L1 5 288 -6742 2909 256 48 30 chr17 59393438 59396346 -30108207 + L1M3e LINE L1 1299 3954 -3152 2266 161 8 3 chr17 59396344 59396711 -30107842 - L1PA16 LINE L1 -54 6112 5744 * 491 88 0 25 chr17 59396711 59396783 -30107770 + L1PA16 LINE L1 6087 6164 -2 3930 184 41 4 chr17 59396821 59397511 -30107042 + MER52A LTR ERV1 1027 1741 -14 306 0 0 0 chr17 59397749 59397783 -30106770 + (CA)n Simple_repeat Simple_repeat 2 35 0 1986 150 3 0 chr17 59397826 59398119 -30106434 - AluJb SINE Alu -18 294 1 279 0 0 0 chr17 59398185 59398223 -30106330 + L1PA3 LINE L1 6115 6152 -3 1399 238 3 45 chr17 59398269 59398622 -30105931 + L1MDb LINE L1 67 404 -6005 3655 215 14 16 chr17 59398647 59399479 -30105074 + L1MDb LINE L1 629 1350 -4954 374 264 102 84 chr17 59399550 59399717 -30104836 + MIR3 SINE MIR 16 185 -23 234 254 0 0 chr17 59401533 59401600 -30102953 + (CATA)n Simple_repeat Simple_repeat 2 68 0 295 295 71 57 chr17 59401878 59402159 -30102394 - L1MC/D LINE L1 -2229 5579 5295 355 386 13 0 chr17 59402396 59402549 -30102004 + Tigger8 DNA MER2_type 71 225 -441 382 312 50 32 chr17 59402649 59403031 -30101522 - MLT1J2 LTR MaLR -13 437 7 523 277 39 29 chr17 59403346 59403552 -30101001 - MIR SINE MIR -21 241 34 298 298 0 12 chr17 59403552 59403621 -30100932 - LTR52 LTR ERVL -146 275 208 693 194 115 107 chr17 59403621 59403873 -30100680 - MLT1C LTR MaLR -3 464 134 2086 79 0 15 chr17 59403873 59404139 -30100414 + AluY SINE Alu 35 296 -15 368 280 16 76 chr17 59404157 59404406 -30100147 - L1MC/D LINE L1 -1434 4712 4484 1960 244 55 25 chr17 59404406 59404931 -30099622 + MLT1F LTR MaLR 2 542 0 368 280 16 76 chr17 59404931 59404995 -30099558 - L1MC/D LINE L1 -1662 4484 4418 33 0 0 0 chr17 59405063 59405096 -30099457 + AT_rich Low_complexity Low_complexity 1 33 0 875 64 96 0 chr17 59405216 59405341 -30099212 + MER85 DNA T2_type 1 137 -2 659 248 35 112 chr17 59405779 59406182 -30098371 - LTR41 LTR ERVL -2 771 400 451 296 11 17 chr17 59406217 59406396 -30098157 - LTR41 LTR ERVL -595 178 1 610 286 79 43 chr17 59407773 59408077 -30096476 + MLT1J2 LTR MaLR 77 391 -59 1713 204 25 11 chr17 59409004 59409362 -30095191 - MLT1A1 LTR MaLR 0 365 3 650 224 53 35 chr17 59409834 59410004 -30094549 - MER5B DNA MER1_type 0 178 6 1803 206 101 46 chr17 59410239 59410714 -30093839 - MLT1D LTR MaLR 0 505 5 1201 63 19 0 chr17 59410769 59410927 -30093626 - L1PA4 LINE L1 -3 6152 5992 2173 145 12 3 chr17 59411018 59411363 -30093190 + MER7A DNA MER2_type 1 346 0 959 187 0 0 chr17 59411653 59411819 -30092734 - AluSg/x SINE Alu -17 293 128 248 28 56 0 chr17 59411824 59411860 -30092693 + (TTTC)n Simple_repeat Simple_repeat 1 38 0 901 100 0 50 chr17 59411862 59412002 -30092551 - AluJb SINE Alu -179 133 1 722 322 84 47 chr17 59412520 59413253 -30091300 - L2 LINE L2 0 3313 2560 1145 301 78 67 chr17 59413253 59414048 -30090505 - L2 LINE L2 -975 2339 1536 1236 150 5 18 chr17 59414934 59415154 -30089399 + L1MA2 LINE L1 15 231 -7334 * 17070 135 43 16 chr17 59415152 59418166 -30086387 + L1MA2 LINE L1 788 3889 -3676 2266 217 11 11 chr17 59418266 59418837 -30085716 + L1MA2 LINE L1 4128 4698 -2867 * 38393 88 5 7 chr17 59418819 59424976 -30079577 + L1PA6 LINE L1 8 6154 0 7670 159 19 5 chr17 59424975 59425214 -30079339 + L1MA2 LINE L1 4671 4905 -2818 * 1691 30 0 0 chr17 59425214 59425415 -30079138 + L1PA4 LINE L1 5951 6152 -3 7670 159 19 5 chr17 59425415 59426695 -30077858 + L1MA2 LINE L1 4905 6165 -1558 2014 153 0 6 chr17 59426695 59427009 -30077544 + AluSx SINE Alu 1 312 0 7670 159 19 5 chr17 59427009 59428509 -30076044 + L1MA2 LINE L1 6165 7723 0 217 307 18 70 chr17 59428641 59428755 -30075798 + MIR SINE MIR 16 123 -85 403 299 22 15 chr17 59429108 59429245 -30075308 - MIR SINE MIR -3 259 122 6338 103 12 30 chr17 59430202 59431194 -30073359 - L1MA2 LINE L1 0 6304 5331 210 247 215 0 chr17 59431194 59431256 -30073297 + MIR SINE MIR 41 122 -140 256 352 33 66 chr17 59431256 59431438 -30073115 - MER5A DNA MER1_type -1 188 13 1187 232 57 52 chr17 59431577 59431965 -30072588 - MLT1B LTR MaLR 0 390 1 2153 274 59 36 chr17 59433028 59433961 -30070592 - L1MC4 LINE L1 -273 7769 6816 730 237 35 6 chr17 59434389 59434562 -30069991 - MER58A DNA MER1_type 0 224 47 309 305 62 49 chr17 59435297 59435605 -30068948 - L1M4 LINE L1 -1483 4663 4352 1069 160 19 29 chr17 59436084 59436290 -30068263 - L1MA7 LINE L1 -232 6059 5856 555 142 58 4 chr17 59436467 59436579 -30067974 + MIR SINE MIR 35 146 -62 22 35 0 0 chr17 59436625 59436654 -30067899 + AT_rich Low_complexity Low_complexity 1 29 0 410 205 33 73 chr17 59436807 59436958 -30067595 - MER104 DNA Tc2 -35 145 1 226 342 8 60 chr17 59436983 59437100 -30067453 - MIR SINE MIR -34 228 118 25652 145 11 11 chr17 59437188 59443561 -30060992 - L1PA8A LINE L1 -4 6442 6 270 367 33 0 chr17 59443622 59443712 -30060841 - L2 LINE L2 -40 3273 3181 1866 154 42 3 chr17 59445890 59446222 -30058331 - Tigger7 DNA MER2_type 0 2487 2143 785 159 4 20 chr17 59446217 59446448 -30058105 + Tigger7 DNA MER2_type 72 347 -2140 * 296 325 0 0 chr17 59446445 59446525 -30058028 - Tigger7 DNA MER2_type -2407 80 1 * 276 244 16 7 chr17 59446983 59447092 -30057461 + MER117 DNA MER1_type 3 196 -1 228 263 40 53 chr17 59447487 59447563 -30056990 + MIR3 SINE MIR 1 75 -133 694 266 104 92 chr17 59447617 59448050 -30056503 + MLT1H LTR MaLR 112 549 0 434 274 26 0 chr17 59448285 59448402 -30056151 + MIR SINE MIR 129 248 -14 916 321 46 17 chr17 59448885 59449234 -30055319 - LTR16B LTR ERVL -6 458 100 648 353 12 6 chr17 59450144 59450311 -30054242 + MER91A DNA MER1_type 2 169 -27 2198 103 0 0 chr17 59450314 59450627 -30053926 + AluSg SINE Alu 2 314 0 687 259 108 13 chr17 59451459 59451691 -30052862 - L2 LINE L2 -509 2805 2552 23 33 0 0 chr17 59452350 59452380 -30052173 + AT_rich Low_complexity Low_complexity 1 30 0 1004 259 50 32 chr17 59452420 59452856 -30051697 + MER114 LTR ERV 1 444 -204 500 178 33 0 chr17 59452940 59453012 -30051541 - MER5A DNA MER1_type -87 102 25 5846 73 13 14 chr17 59453012 59453793 -30050760 - LTR17 LTR ERV1 0 780 1 500 178 33 0 chr17 59453793 59453810 -30050743 - MER5A DNA MER1_type -164 25 10 35 41 0 0 chr17 59454432 59454481 -30050072 + AT_rich Low_complexity Low_complexity 1 49 0 1607 120 47 125 chr17 59454931 59455338 -30049215 - THE1C LTR MaLR 0 375 1 29 28 0 0 chr17 59455405 59455441 -30049112 + AT_rich Low_complexity Low_complexity 1 36 0 563 223 96 30 chr17 59456282 59456448 -30048105 + MER102b DNA MER1_type 20 196 -145 250 319 64 0 chr17 59456620 59456714 -30047839 + MER102b DNA MER1_type 232 331 -10 549 152 0 30 chr17 59456922 59457021 -30047532 - AluSg1 SINE Alu -212 97 2 1655 181 0 23 chr17 59457577 59457880 -30046673 - AluJo SINE Alu -16 296 1 237 235 0 0 chr17 59457884 59457935 -30046618 + MER117 DNA MER1_type 53 103 -94 2306 102 0 0 chr17 59458577 59458881 -30045672 + AluSx SINE Alu 1 304 -8 753 210 84 6 chr17 59459091 59459258 -30045295 + MLT1D LTR MaLR 326 505 0 316 258 17 25 chr17 59460548 59460668 -30043885 + MER113 DNA MER1_type? 1 119 -402 2337 75 3 3 chr17 59461882 59462188 -30042365 + AluY SINE Alu 1 306 -5 216 306 51 20 chr17 59463248 59463346 -30041207 - MIR SINE MIR -70 192 92 675 221 70 89 chr17 59463404 59463617 -30040936 + MER58A DNA MER1_type 1 209 -15 416 248 0 30 chr17 59463626 59463727 -30040826 - L2 LINE L2 -41 3272 3175 431 248 171 0 chr17 59463755 59463884 -30040669 - MLT1D LTR MaLR -68 437 287 525 206 85 22 chr17 59463912 59464073 -30040480 - MLT1D LTR MaLR -310 195 27 221 73 0 24 chr17 59464112 59464153 -30040400 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1679 176 0 14 chr17 59464153 59464437 -30040116 - AluJo SINE Alu -32 280 1 387 250 57 0 chr17 59464439 59464527 -30040026 - L2 LINE L2 -955 2359 2267 390 279 191 7 chr17 59465940 59466087 -30038466 + MIR SINE MIR 66 239 -23 240 35 0 0 chr17 59466903 59466932 -30037621 + (TG)n Simple_repeat Simple_repeat 2 30 0 2361 291 87 11 chr17 59467133 59467976 -30036577 - L2 LINE L2 -654 2660 1754 7363 35 9 0 chr17 59470877 59472211 -30032342 + L1PA4 LINE L1 4809 6155 0 35 0 0 0 chr17 59472211 59472246 -30032307 + AT_rich Low_complexity Low_complexity 1 35 0 690 269 53 108 chr17 59472514 59472930 -30031623 + MLT1J1 LTR MaLR 54 446 0 572 255 19 19 chr17 59472934 59473095 -30031458 - MIR SINE MIR -38 224 64 239 250 36 0 chr17 59475124 59475180 -30029373 - L2 LINE L2 0 3313 3256 9642 35 0 2 chr17 59475455 59477396 -30027157 - L1PA3 LINE L1 0 6155 4218 7606 32 0 0 chr17 59477393 59478306 -30026247 + L1PA3 LINE L1 3307 4219 -1927 2117 106 0 0 chr17 59479447 59479753 -30024800 - AluSg SINE Alu 0 306 1 189 0 0 0 chr17 59480015 59480036 -30024517 + (T)n Simple_repeat Simple_repeat 1 21 0 927 188 127 60 chr17 59480049 59480377 -30024176 + MLT1A1 LTR MaLR 1 396 0 3784 204 30 9 chr17 59481045 59482417 -30022136 + L1MB8 LINE L1 4382 5784 -400 1420 187 137 8 chr17 59483382 59483740 -30020813 + L1MB8 LINE L1 5773 6176 -2 578 294 69 20 chr17 59484557 59484948 -30019605 + L1ME2 LINE L1 3543 3952 -2194 435 307 79 73 chr17 59485097 59485592 -30018961 + L1ME2 LINE L1 4162 4659 -1487 537 267 62 110 chr17 59485655 59486045 -30018508 + MLT1I LTR MaLR 36 406 -3 4361 163 8 35 chr17 59486069 59486938 -30017615 - L1P LINE L1 -1014 5132 4287 2910 76 17 2 chr17 59486939 59487346 -30017207 + L1PA13 LINE L1 5751 6163 0 313 311 95 23 chr17 59487482 59487746 -30016807 + L1ME2 LINE L1 5436 5718 -452 711 300 36 44 chr17 59487936 59488051 -30016502 + L1ME2 LINE L1 5759 5873 -291 2423 68 3 0 chr17 59488051 59488359 -30016194 + AluY SINE Alu 1 309 -2 711 300 36 44 chr17 59488359 59488603 -30015950 + L1ME2 LINE L1 5873 6115 -49 185 145 53 0 chr17 59488839 59488915 -30015638 + (TA)n Simple_repeat Simple_repeat 1 80 0 305 250 67 29 chr17 59488934 59489038 -30015515 - L1ME LINE L1 -452 5718 5611 271 259 78 34 chr17 59489283 59489488 -30015065 + L1ME4a LINE L1 5872 6085 -36 327 274 128 17 chr17 59489561 59489678 -30014875 - L2 LINE L2 -6 3266 3137 7232 51 0 2 chr17 59490020 59491549 -30013004 + L1PA7 LINE L1 4620 6153 -1 806 212 49 30 chr17 59491657 59491860 -30012693 - MLT1D LTR MaLR 0 505 299 630 273 0 12 chr17 59491978 59492143 -30012410 - AluJo/FRAM SINE Alu -3 299 137 576 132 215 0 chr17 59492146 59492267 -30012286 - AluSp/q SINE Alu -12 301 155 644 152 0 0 chr17 59492267 59492366 -30012187 - LTR12 LTR ERV1 -135 579 481 240 247 14 0 chr17 59492367 59492440 -30012113 - LTR30 LTR ERV1 -79 643 570 1350 132 12 101 chr17 59492442 59492833 -30011720 - LTR12 LTR ERV1 -389 2049 14 333 214 0 36 chr17 59492833 59492925 -30011628 - AluJ/monomer SINE Alu -251 50 2 2176 103 0 0 chr17 59493073 59493391 -30011162 - AluSc SINE Alu 0 318 1 1388 224 57 26 chr17 59493916 59494268 -30010285 + MLT1A1 LTR MaLR 3 365 0 2470 170 21 2 chr17 59494269 59494687 -30009866 - MSTB LTR MaLR 0 426 1 1596 158 42 7 chr17 59494778 59495100 -30009453 - AluSx SINE Alu 0 312 1 27 81 0 0 chr17 59495496 59495558 -30008995 + AT_rich Low_complexity Low_complexity 1 62 0 1655 181 10 14 chr17 59496795 59497083 -30007470 - AluJo SINE Alu -25 287 1 1334 197 171 14 chr17 59497122 59497473 -30007080 - L1MB7 LINE L1 -16 6168 5763 9754 123 20 25 chr17 59498388 59500709 -30003844 + L1PA10 LINE L1 3832 6157 -11 23 0 0 0 chr17 59501007 59501030 -30003523 + AT_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr17 59501202 59501236 -30003317 + (TC)n Simple_repeat Simple_repeat 1 34 0 252 59 0 0 chr17 59501267 59501301 -30003252 + (CA)n Simple_repeat Simple_repeat 1 34 0 225 277 0 24 chr17 59501703 59501786 -30002767 + L1MC4 LINE L1 6625 6705 -1337 28 48 0 0 chr17 59501953 59501995 -30002558 + AT_rich Low_complexity Low_complexity 1 42 0 225 182 0 18 chr17 59502117 59502172 -30002381 + L1MD3 LINE L1 7929 7982 -13 333 257 71 0 chr17 59502175 59502288 -30002265 - MER113 DNA MER1_type? -400 121 1 2008 136 7 0 chr17 59502353 59502648 -30001905 + AluSx SINE Alu 1 297 -15 481 229 168 46 chr17 59502860 59503122 -30001431 - LTR50 LTR ERVL 0 795 502 556 249 11 63 chr17 59503326 59503515 -30001038 - LTR41 LTR ERVL -585 188 10 29 28 0 0 chr17 59503736 59503772 -30000781 + AT_rich Low_complexity Low_complexity 1 36 0 402 296 59 50 chr17 59503814 59504523 -30000030 + L1ME4a LINE L1 5221 5941 -180 31 44 0 0 chr17 59504686 59504731 -29999822 + AT_rich Low_complexity Low_complexity 1 45 0 1317 183 19 4 chr17 59505344 59505606 -29998947 + L1MA6 LINE L1 4995 5260 -886 4343 153 14 27 chr17 59505608 59506433 -29998120 + L1MA6 LINE L1 5486 6300 0 284 301 135 26 chr17 59506571 59506727 -29997826 - MIR SINE MIR -70 192 20 2763 212 17 36 chr17 59506895 59507004 -29997549 - L1M2 LINE L1 -4125 2724 2614 1559 186 48 3 chr17 59507004 59507299 -29997254 - AluSx SINE Alu -2 310 3 2763 212 17 36 chr17 59507299 59507853 -29996700 - L1M2 LINE L1 -4235 2614 2074 16394 199 20 28 chr17 59507853 59512713 -29991840 + L1PA15 LINE L1 1264 6043 -773 2211 106 0 7 chr17 59512713 59513015 -29991538 + AluY SINE Alu 1 300 -11 16394 199 20 28 chr17 59513015 59513763 -29990790 + L1PA15 LINE L1 6043 6795 -21 194 33 67 0 chr17 59513766 59513796 -29990757 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 246 196 18 18 chr17 59513810 59513866 -29990687 + MIR SINE MIR 50 105 -157 2469 189 39 65 chr17 59514430 59515042 -29989511 + LTR9 LTR ERV1 1 596 -16 222 274 27 0 chr17 59515283 59515356 -29989197 + GA-rich Low_complexity Low_complexity 4 78 0 238 270 0 0 chr17 59516205 59516279 -29988274 + (TTTA)n Simple_repeat Simple_repeat 3 76 0 405 277 9 18 chr17 59517655 59517767 -29986786 - MER45 DNA AcHobo -60 118 8 324 326 0 23 chr17 59522050 59522179 -29982374 - LTR67 LTR ERVL -5 552 427 955 289 78 58 chr17 59523463 59523926 -29980627 - L2 LINE L2 -1 3312 2836 2315 103 0 0 chr17 59523926 59524227 -29980326 + AluY SINE Alu 1 301 -10 955 289 78 58 chr17 59524227 59524403 -29980150 - L2 LINE L2 -477 2836 2665 331 370 56 6 chr17 59524443 59524605 -29979948 - L3 LINE CR1 -427 1150 981 1515 264 46 14 chr17 59524608 59525253 -29979300 + L1MEc LINE L1 14 732 -5664 1522 252 75 15 chr17 59525257 59525405 -29979148 + L1M4 LINE L1 2896 3034 -3112 3083 142 8 6 chr17 59525405 59525911 -29978642 - MER9 LTR ERVK -4 507 1 1522 252 75 15 chr17 59525911 59526406 -29978147 + L1M4 LINE L1 3034 3581 -2565 1456 202 8 0 chr17 59526406 59526663 -29977890 - AluJo SINE Alu -20 292 34 6675 145 12 2 chr17 59526681 59528488 -29976065 - L1MA3 LINE L1 0 7724 5721 1241 119 0 0 chr17 59528491 59528684 -29975869 - L1MA3 LINE L1 -5076 2489 2297 7142 169 9 15 chr17 59528685 59529962 -29974591 - L1MA3 LINE L1 -6280 1285 16 503 226 49 0 chr17 59530008 59530172 -29974381 + L1ME1 LINE L1 5072 5243 -903 239 116 47 0 chr17 59530175 59530218 -29974335 + MLT1A1 LTR MaLR 1 45 -383 659 178 158 20 chr17 59530220 59530366 -29974187 - FAM SINE Alu -9 166 1 713 213 66 6 chr17 59530441 59530624 -29973929 + MLT1A1 LTR MaLR 172 365 0 1795 225 132 13 chr17 59530636 59531271 -29973282 + L1ME1 LINE L1 5254 5964 -202 23 0 0 0 chr17 59531370 59531393 -29973160 + AT_rich Low_complexity Low_complexity 1 23 0 596 285 82 12 chr17 59531426 59531766 -29972787 - L1MDa LINE L1 -3575 2965 2602 350 232 42 84 chr17 59531774 59531916 -29972637 - L1MDa LINE L1 -3963 2577 2442 1769 159 62 7 chr17 59531995 59532285 -29972268 + AluJb SINE Alu 1 306 -6 22 35 0 0 chr17 59533552 59533581 -29970972 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 59534060 59534084 -29970469 + AT_rich Low_complexity Low_complexity 1 24 0 279 0 0 0 chr17 59534527 59534558 -29969995 + (ATG)n Simple_repeat Simple_repeat 1 31 0 1965 109 11 7 chr17 59534558 59534880 -29969673 - AluSx SINE Alu 0 323 1 245 289 184 7 chr17 59535066 59535218 -29969335 - MIR SINE MIR -68 194 16 343 323 118 20 chr17 59536247 59536464 -29968089 + MIR SINE MIR 15 251 -11 1959 138 0 52 chr17 59536691 59537018 -29967535 + AluSq SINE Alu 1 310 -3 342 282 47 59 chr17 59537232 59537402 -29967151 + L1ME3 LINE L1 5718 5885 -277 1188 234 17 0 chr17 59537419 59537654 -29966899 + MER8 DNA MER2_type 1 239 0 22 70 0 0 chr17 59537913 59537956 -29966597 + AT_rich Low_complexity Low_complexity 1 43 0 219 298 76 46 chr17 59538395 59538526 -29966027 - MIR SINE MIR -25 237 103 2327 68 38 3 chr17 59538971 59539263 -29965290 - AluY SINE Alu -9 302 1 5473 158 27 8 chr17 59541512 59541817 -29962736 + L1PB2 LINE L1 4399 4697 -1454 186 43 0 0 chr17 59541817 59541840 -29962713 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 5473 158 27 8 chr17 59541840 59543252 -29961301 + L1PB2 LINE L1 4697 6149 -2 4608 146 14 8 chr17 59543261 59544086 -29960467 + L1PB4 LINE L1 5315 6144 -12 361 232 98 89 chr17 59544701 59544947 -29959606 + L2 LINE L2 3058 3305 -8 291 350 37 37 chr17 59545063 59545226 -29959327 - MIR SINE MIR -89 173 11 892 178 27 93 chr17 59545375 59545600 -29958953 + MER20 DNA MER1_type 9 218 -1 6622 71 39 0 chr17 59546141 59547559 -29956994 - L1PA8 LINE L1 0 6172 4716 537 261 74 11 chr17 59547694 59547872 -29956681 - MIR SINE MIR -65 143 6 676 327 34 5 chr17 59548037 59548242 -29956311 + MIR SINE MIR 31 241 -21 180 0 0 0 chr17 59548435 59548455 -29956098 + (CAA)n Simple_repeat Simple_repeat 2 21 0 231 333 0 14 chr17 59548556 59548628 -29955925 - L2 LINE L2 -2 3270 3200 194 328 16 0 chr17 59548825 59548886 -29955667 - L2 LINE L2 -213 3059 2998 636 315 84 8 chr17 59548909 59549147 -29955406 + MIR SINE MIR 3 258 -4 253 385 100 43 chr17 59549187 59549558 -29954995 - L2 LINE L2 -363 2951 2560 341 307 18 0 chr17 59550574 59550688 -29953865 + 7SK RNA RNA 2 117 -76 187 289 39 0 chr17 59550978 59551030 -29953523 - MIR SINE MIR -105 103 50 836 249 27 23 chr17 59552210 59552431 -29952122 - MER58A DNA MER1_type 0 224 3 22 56 0 0 chr17 59553446 59553482 -29951071 + AT_rich Low_complexity Low_complexity 1 36 0 254 240 189 18 chr17 59553839 59554003 -29950550 + MIR SINE MIR 19 216 -42 1774 161 3 45 chr17 59554569 59554879 -29949674 - AluJo SINE Alu -15 297 1 29 0 0 0 chr17 59555218 59555247 -29949306 + AT_rich Low_complexity Low_complexity 1 29 0 259 333 69 0 chr17 59555897 59555999 -29948554 + MIR SINE MIR 48 156 -106 220 211 42 0 chr17 59556295 59556366 -29948187 + T-rich Low_complexity Low_complexity 2 75 0 2112 149 39 14 chr17 59556524 59556879 -29947674 + THE1B LTR MaLR 1 364 0 598 331 60 19 chr17 59556948 59557265 -29947288 + MLT1K LTR MaLR 144 473 -115 727 115 0 18 chr17 59557478 59557591 -29946962 - AluJb SINE Alu 0 312 202 1769 164 4 11 chr17 59557608 59557888 -29946665 + AluJb SINE Alu 21 298 -14 2394 68 14 0 chr17 59558024 59558319 -29946234 - AluY SINE Alu -12 299 1 22 0 0 0 chr17 59558319 59558341 -29946212 + AT_rich Low_complexity Low_complexity 1 22 0 489 167 29 20 chr17 59558841 59558943 -29945610 + MLT1K LTR MaLR 486 588 0 298 295 18 18 chr17 59560387 59560499 -29944054 - MLT1J1 LTR MaLR -295 151 40 222 237 161 48 chr17 59561517 59561703 -29942850 - L2 LINE L2 -7 3306 3100 708 256 13 64 chr17 59561709 59561943 -29942610 + MIR SINE MIR 41 262 0 21 36 0 0 chr17 59562008 59562036 -29942517 + AT_rich Low_complexity Low_complexity 1 28 0 2233 112 3 0 chr17 59562950 59563255 -29941298 + AluSq SINE Alu 1 306 -7 261 309 54 112 chr17 59564597 59564820 -29939733 + L2 LINE L2 3058 3267 -5 253 314 144 8 chr17 59565166 59565284 -29939269 + MIR SINE MIR 4 137 -125 291 329 54 22 chr17 59566275 59566436 -29938117 - MIR SINE MIR -63 145 30 255 248 230 18 chr17 59566743 59566856 -29937697 + MIR3 SINE MIR 44 180 -28 206 339 17 34 chr17 59567331 59567449 -29937104 - MIR SINE MIR -74 188 73 2283 11 57 0 chr17 59567498 59567763 -29936790 + AluY SINE Alu 21 300 -11 2167 73 7 7 chr17 59567772 59568061 -29936492 + AluY SINE Alu 1 289 -22 294 297 168 0 chr17 59568598 59568699 -29935854 + L2 LINE L2 3137 3254 -18 255 322 33 53 chr17 59569911 59570063 -29934490 + L2 LINE L2 3123 3271 -1 673 239 63 108 chr17 59571068 59571448 -29933105 + MLT1A1 LTR MaLR 3 365 0 201 300 56 33 chr17 59571523 59571613 -29932940 - MER5B DNA MER1_type -79 99 8 294 161 0 0 chr17 59573725 59573787 -29930766 + L1 LINE L1 4255 4316 -1830 504 218 30 0 chr17 59573851 59573952 -29930601 + MER58A DNA MER1_type 1 104 -3 1335 222 45 77 chr17 59573961 59574574 -29929979 - LTR19C LTR ERV1 -24 770 1 656 230 0 0 chr17 59574574 59574700 -29929853 + MER58A DNA MER1_type 99 224 0 264 190 13 25 chr17 59574987 59575066 -29929487 + L1ME LINE L1 5685 5762 -359 22 0 0 0 chr17 59575282 59575304 -29929249 + AT_rich Low_complexity Low_complexity 1 22 0 324 48 0 0 chr17 59576338 59576380 -29928173 + (CA)n Simple_repeat Simple_repeat 2 43 0 208 256 0 0 chr17 59576508 59576551 -29928002 + L2 LINE L2 3267 3309 -4 350 205 264 18 chr17 59577221 59577386 -29927167 - MIR SINE MIR -60 202 6 23 86 0 0 chr17 59577838 59577896 -29926657 + AT_rich Low_complexity Low_complexity 1 58 0 305 278 26 98 chr17 59577942 59578176 -29926377 - L1MC4 LINE L1 0 8042 7826 456 315 62 26 chr17 59578248 59578556 -29925997 - L1ME LINE L1 -462 5659 5341 6833 72 2 0 chr17 59579096 59580815 -29923738 + L1PA7 LINE L1 4432 6151 -3 619 324 41 55 chr17 59580963 59581402 -29923151 + L1ME LINE L1 147 579 -5626 278 256 24 0 chr17 59581665 59581747 -29922806 + L1ME LINE L1 661 744 -5461 2068 167 0 14 chr17 59581837 59582208 -29922345 - MER47A DNA MER2_type 0 366 1 810 271 63 55 chr17 59582279 59582986 -29921567 + L1ME LINE L1 935 1692 -4704 24 0 0 0 chr17 59583074 59583098 -29921455 + AT_rich Low_complexity Low_complexity 1 24 0 402 330 121 0 chr17 59583180 59583386 -29921167 - MIR SINE MIR -30 232 2 551 325 24 20 chr17 59583393 59583642 -29920911 - MIR SINE MIR -10 252 3 2656 93 0 48 chr17 59584928 59585324 -29919229 + MER51B LTR ERV1 1 377 0 235 226 38 0 chr17 59585670 59585723 -29918830 - MIR3 SINE MIR -5 203 149 323 237 33 92 chr17 59585727 59585879 -29918674 + L1ME LINE L1 2168 2310 -4086 1278 196 50 33 chr17 59586089 59586540 -29918013 + MER31A LTR ERV1 1 485 0 416 314 38 24 chr17 59586546 59586668 -29917885 + L1ME LINE L1 2543 2671 -3544 3942 94 2 14 chr17 59586668 59587229 -29917324 - MER41A LTR ERV1 0 554 1 416 314 38 24 chr17 59587229 59587316 -29917237 + L1ME LINE L1 2671 2755 -3460 761 169 0 58 chr17 59587316 59587375 -29917178 + MLT1A2 LTR MaLR 1 62 -312 3801 110 2 51 chr17 59587375 59588002 -29916551 + MER4A LTR ERV1 1 596 -4 761 169 0 58 chr17 59588002 59588114 -29916439 + MLT1A2 LTR MaLR 62 162 -212 249 163 0 0 chr17 59588122 59588171 -29916382 + CT-rich Low_complexity Low_complexity 2 50 0 724 215 10 80 chr17 59588221 59588421 -29916132 + MLT1A2 LTR MaLR 189 374 0 752 210 28 53 chr17 59588478 59588608 -29915945 + L1ME LINE L1 2815 2947 -3268 2357 92 0 0 chr17 59588608 59588901 -29915652 - AluSc SINE Alu -16 293 1 752 210 28 53 chr17 59588901 59589089 -29915464 + L1ME LINE L1 2947 3125 -3090 586 274 113 68 chr17 59589121 59589297 -29915256 + L1ME LINE L1 3202 3369 -2846 1626 174 29 29 chr17 59589297 59589607 -29914946 + AluJo SINE Alu 3 312 0 586 274 113 68 chr17 59589607 59589901 -29914652 + L1ME LINE L1 3369 3693 -2522 364 303 123 48 chr17 59590729 59591062 -29913491 + L1ME4a LINE L1 5715 6072 -49 264 359 76 0 chr17 59591959 59592104 -29912449 - MIR SINE MIR 0 262 107 239 342 36 18 chr17 59592180 59592291 -29912262 - MIR SINE MIR -130 132 20 198 233 0 0 chr17 59592828 59592888 -29911665 + (CA)n Simple_repeat Simple_repeat 1 60 0 269 356 69 19 chr17 59593214 59593374 -29911179 - L2 LINE L2 0 3272 3105 243 196 18 0 chr17 59593835 59593891 -29910662 + MER96 DNA MER1_type? 1 57 -118 2544 157 15 11 chr17 59593891 59594369 -29910184 - MER31A LTR ERV1 0 485 6 441 232 0 10 chr17 59594374 59594473 -29910080 - MER96 DNA MER1_type? -53 122 25 907 249 35 39 chr17 59594476 59594882 -29909671 + L1ME1 LINE L1 1722 2125 -4415 505 229 49 8 chr17 59594898 59595143 -29909410 + L1ME1 LINE L1 3535 3789 -2751 2969 70 5 2 chr17 59595147 59595545 -29909008 + MLT2A1 LTR ERVL 1 399 -45 276 133 0 0 chr17 59595546 59595606 -29908947 + (TA)n Simple_repeat Simple_repeat 2 61 0 2963 67 0 0 chr17 59595630 59596020 -29908533 + HERVL-A1 LTR ERVL 1 390 -5264 * 10291 77 8 8 chr17 59596001 59597422 -29907131 + HERVL-A1 LTR ERVL 4233 5654 0 2992 82 0 2 chr17 59597422 59597827 -29906726 + MLT2A1 LTR ERVL 1 404 -40 361 289 0 0 chr17 59597837 59597927 -29906626 - L1MC4 LINE L1 -1339 6703 6614 395 62 0 47 chr17 59597994 59598058 -29906495 + MLT2A1 LTR ERVL 384 444 0 4763 222 54 75 chr17 59598069 59599432 -29905121 + L1ME1 LINE L1 3799 5182 -1514 483 159 0 57 chr17 59599432 59599520 -29905033 + AluJ/FLAM SINE Alu 1 83 -229 4763 222 54 75 chr17 59599520 59600277 -29904276 + L1ME1 LINE L1 5182 5953 -743 35810 89 8 9 chr17 59600286 59606501 -29898052 + L1PA6 LINE L1 11 6219 0 1541 242 82 32 chr17 59606506 59606706 -29897847 + L1ME1 LINE L1 5948 6137 -423 303 28 0 0 chr17 59606706 59606742 -29897811 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1541 242 82 32 chr17 59606742 59607104 -29897449 + L1ME1 LINE L1 6137 6538 -22 233 247 0 68 chr17 59607624 59607697 -29896856 - MIR3 SINE MIR -8 200 133 1107 250 68 36 chr17 59607779 59608191 -29896362 + MER74B LTR ERVL 124 548 -74 404 116 47 35 chr17 59608119 59608205 -29896348 - MER88 LTR ERVL -299 165 79 * 286 278 144 37 chr17 59609440 59609627 -29894926 - MIR SINE MIR -6 256 50 999 270 36 26 chr17 59609855 59610240 -29894313 + L1ME3A LINE L1 5567 5955 -215 189 347 138 18 chr17 59610871 59611038 -29893515 - L2 LINE L2 -225 3047 2861 201 138 0 0 chr17 59611092 59611121 -29893432 + (TG)n Simple_repeat Simple_repeat 1 29 0 1686 176 6 29 chr17 59611147 59611459 -29893094 + AluJo SINE Alu 1 305 -7 2152 253 30 64 chr17 59611482 59611533 -29893020 + L1ME3 LINE L1 5285 5336 -826 2352 84 3 0 chr17 59611533 59611831 -29892722 + AluSp SINE Alu 1 299 -14 2152 253 30 64 chr17 59611831 59612039 -29892514 + L1ME3 LINE L1 5336 5550 -612 3271 134 18 0 chr17 59612039 59612537 -29892016 - MER84 LTR ERV1 0 507 1 2152 253 30 64 chr17 59612537 59613177 -29891376 + L1ME3 LINE L1 5550 6154 -8 641 306 10 16 chr17 59613497 59613690 -29890863 + MIR SINE MIR 20 211 -51 303 230 27 51 chr17 59613864 59614022 -29890531 + MLT1J LTR MaLR 105 188 -323 293 183 106 58 chr17 59614211 59614315 -29890238 + MLT1L LTR MaLR 507 615 0 232 237 194 11 chr17 59614401 59614494 -29890059 - L2 LINE L2 -9 3263 3154 423 311 133 76 chr17 59614583 59614959 -29889594 + L2 LINE L2 2850 3254 -59 981 251 9 0 chr17 59614959 59615178 -29889375 + MER58A DNA MER1_type 1 221 -3 423 311 133 76 chr17 59615178 59615222 -29889331 + L2 LINE L2 3254 3294 -19 263 57 0 0 chr17 59615603 59615638 -29888915 - L1PA15 LINE L1 -13 6152 6118 2472 171 10 0 chr17 59615638 59616054 -29888499 - MER52A LTR ERV1 0 1755 1336 1999 151 0 0 chr17 59616522 59616813 -29887740 - AluSx SINE Alu -21 291 1 581 209 0 0 chr17 59616833 59616938 -29887615 + Tigger3b DNA MER2_type 1 105 -1126 * 2109 110 39 13 chr17 59616936 59617318 -29887235 + Tigger3b DNA MER2_type 213 604 -627 639 147 0 140 chr17 59617319 59617469 -29887084 + AluJb SINE Alu 3 131 -181 453 321 67 36 chr17 59617594 59617980 -29886573 + MLT1J1 LTR MaLR 32 429 -17 2574 146 27 23 chr17 59618146 59618633 -29885920 - L1MB3 LINE L1 -2 6181 5693 22 0 0 0 chr17 59618698 59618720 -29885833 + AT_rich Low_complexity Low_complexity 1 22 0 341 138 0 0 chr17 59619026 59619084 -29885469 + Tigger7 DNA MER2_type 53 110 -2377 423 0 0 0 chr17 59619085 59619132 -29885421 + (TG)n Simple_repeat Simple_repeat 2 48 0 2115 92 7 0 chr17 59619262 59619535 -29885018 - AluSp SINE Alu -38 275 1 2321 110 0 0 chr17 59620179 59620478 -29884075 - AluSx SINE Alu -13 299 1 543 246 51 0 chr17 59620670 59620808 -29883745 - MER5B DNA MER1_type 0 178 34 1167 65 0 0 chr17 59620984 59621123 -29883430 - AluSq/x SINE Alu -174 139 1 283 125 0 0 chr17 59621476 59621524 -29883029 - MLT1E2 LTR MaLR -5 621 574 797 259 24 70 chr17 59621540 59621788 -29882765 - MLT1D LTR MaLR -148 357 130 3877 83 57 89 chr17 59621788 59621922 -29882631 - MER4A LTR ERV1 0 664 527 2380 96 0 0 chr17 59621922 59622223 -29882330 - AluSc SINE Alu -8 301 1 3877 83 57 89 chr17 59622223 59622774 -29881779 - MER4A LTR ERV1 -137 527 1 797 259 24 70 chr17 59622774 59622899 -29881654 - MLT1D LTR MaLR -375 130 1 357 196 43 0 chr17 59622899 59622991 -29881562 - MLT1D-int LTR MaLR 0 1371 1276 2213 132 0 0 chr17 59623116 59623420 -29881133 - AluSx SINE Alu -8 304 1 1780 107 93 10 chr17 59623486 59623839 -29880714 - LTR7 LTR ERV1 -13 437 3 2125 134 0 0 chr17 59625528 59625834 -29878719 + AluSx SINE Alu 1 306 -6 375 229 162 67 chr17 59626129 59626339 -29878214 - MIR SINE MIR -3 259 30 2017 142 0 0 chr17 59626725 59627026 -29877527 + AluSx SINE Alu 1 301 0 186 382 36 0 chr17 59627951 59628061 -29876492 + L2 LINE L2 2261 2374 -940 249 185 108 0 chr17 59629118 59629183 -29875370 - MER103 DNA DNA -88 78 7 21 0 0 0 chr17 59629187 59629208 -29875345 + AT_rich Low_complexity Low_complexity 1 21 0 222 266 201 58 chr17 59629657 59629796 -29874757 - MIR SINE MIR -101 161 3 213 147 73 15 chr17 59630050 59630118 -29874435 + (TTATA)n Simple_repeat Simple_repeat 2 73 0 189 277 126 34 chr17 59630128 59630247 -29874306 - MIR SINE MIR -83 179 50 238 284 193 23 chr17 59630392 59630552 -29874001 - MIR3 SINE MIR -54 154 34 2191 176 46 70 chr17 59630887 59631129 -29873424 + L1MD2 LINE L1 5826 6072 -287 1493 170 100 24 chr17 59631129 59631418 -29873135 - AluJo SINE Alu -1 311 1 2191 176 46 70 chr17 59631418 59631510 -29873043 + L1MD2 LINE L1 6072 6165 -194 195 42 0 0 chr17 59631510 59631534 -29873019 + (CA)n Simple_repeat Simple_repeat 2 25 0 2191 176 46 70 chr17 59631534 59631738 -29872815 + L1MD2 LINE L1 6165 6352 -7 3335 133 16 2 chr17 59636668 59637177 -29867376 - Tigger3b DNA MER2_type 0 1232 717 3141 78 23 16 chr17 59637177 59637574 -29866979 + MLT2A1 LTR ERVL 1 403 -41 366 23 0 0 chr17 59637574 59637617 -29866936 + (CA)n Simple_repeat Simple_repeat 2 44 0 3141 78 23 16 chr17 59637617 59637652 -29866901 + MLT2A1 LTR ERVL 403 436 -8 4344 126 32 16 chr17 59637655 59638364 -29866189 - Tigger3b DNA MER2_type -510 721 1 260 113 113 0 chr17 59639232 59639285 -29865268 + MIR SINE MIR 66 124 -138 2149 110 30 0 chr17 59639539 59639840 -29864713 + AluSx SINE Alu 1 310 -2 596 209 101 0 chr17 59641159 59641288 -29863265 + MER58B DNA MER1_type 200 341 0 222 274 10 39 chr17 59641432 59641534 -29863019 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 1227 246 87 29 chr17 59642720 59643066 -29861487 - LTR16C LTR ERVL -26 465 100 4215 134 45 7 chr17 59643548 59644233 -29860320 + MER50 LTR ERV1 1 711 -23 27 0 0 0 chr17 59644659 59644686 -29859867 + AT_rich Low_complexity Low_complexity 1 27 0 736 257 129 43 chr17 59645731 59646148 -29858405 - L2 LINE L2 -2 3311 2859 1610 148 32 39 chr17 59646410 59646716 -29857837 - AluJb SINE Alu 0 304 1 589 223 33 0 chr17 59647142 59647263 -29857290 - MIR SINE MIR -89 173 49 186 43 0 0 chr17 59647355 59647378 -29857175 + (CA)n Simple_repeat Simple_repeat 2 24 0 246 148 0 0 chr17 59647378 59647432 -29857121 + (GA)n Simple_repeat Simple_repeat 1 54 0 1316 255 43 50 chr17 59647437 59647856 -29856697 - MLT2C2 LTR ERVL -48 416 1 441 306 126 5 chr17 59647959 59648165 -29856388 + MIR SINE MIR 1 231 -31 323 266 46 0 chr17 59648513 59648622 -29855931 + MER103 DNA DNA 46 159 -7 230 348 81 43 chr17 59648668 59648829 -29855724 + L2 LINE L2 3100 3266 -6 22 0 0 0 chr17 59648829 59648851 -29855702 + AT_rich Low_complexity Low_complexity 1 22 0 301 339 39 54 chr17 59648851 59648981 -29855572 - L2 LINE L2 0 3272 3145 257 185 15 0 chr17 59649019 59649084 -29855469 + (TA)n Simple_repeat Simple_repeat 2 67 0 299 210 0 16 chr17 59649187 59649249 -29855304 - MSTD LTR MaLR 0 396 336 298 281 37 59 chr17 59649567 59649702 -29854851 + L2 LINE L2 3141 3272 0 2057 127 3 26 chr17 59650359 59650667 -29853886 + AluSx SINE Alu 1 301 -11 237 33 0 0 chr17 59650670 59650700 -29853853 + (CA)n Simple_repeat Simple_repeat 1 30 0 350 304 59 59 chr17 59651476 59651518 -29853035 - L2 LINE L2 0 3313 3272 2245 233 26 67 chr17 59651518 59651574 -29852979 + HsTC2a DNA MER2_type 5 62 -1838 2095 115 3 29 chr17 59651574 59651888 -29852665 + AluSq SINE Alu 1 306 -7 2245 233 26 67 chr17 59651888 59652365 -29852188 + HsTC2a DNA MER2_type 62 499 -1401 1956 132 11 0 chr17 59652365 59652646 -29851907 - AluSq SINE Alu -29 284 1 2245 233 26 67 chr17 59652646 59652883 -29851670 + HsTC2a DNA MER2_type 499 744 0 350 304 59 59 chr17 59652883 59653077 -29851476 - L2 LINE L2 -40 3273 3077 543 276 61 20 chr17 59653579 59653775 -29850778 - MIR SINE MIR -8 254 51 319 298 30 8 chr17 59654154 59654285 -29850268 - MIR SINE MIR 0 262 129 23 0 0 0 chr17 59654847 59654870 -29849683 + AT_rich Low_complexity Low_complexity 1 23 0 221 191 43 0 chr17 59654891 59654938 -29849615 + MIR SINE MIR 204 252 -10 687 177 26 18 chr17 59655165 59655278 -29849275 + FLAM_C SINE Alu 1 114 -19 216 86 0 0 chr17 59655278 59655313 -29849240 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 300 317 70 7 chr17 59655640 59655782 -29848771 + MIR SINE MIR 102 252 -10 210 191 0 0 chr17 59656182 59656229 -29848324 + A-rich Low_complexity Low_complexity 1 47 0 216 262 16 0 chr17 59658379 59658440 -29846113 - MIR SINE MIR -108 154 93 202 294 206 8 chr17 59658832 59658958 -29845595 + MIR3 SINE MIR 8 158 -50 289 364 62 0 chr17 59659084 59659213 -29845340 - L2 LINE L2 0 3272 3136 2046 93 40 10 chr17 59659382 59659682 -29844871 - AluSx SINE Alu -3 309 1 370 314 32 8 chr17 59660300 59660424 -29844129 + MIR SINE MIR 18 144 -118 2410 75 0 10 chr17 59661177 59661482 -29843071 + AluY SINE Alu 1 302 -9 206 308 158 7 chr17 59661914 59662057 -29842496 - MIR SINE MIR -71 191 20 1751 188 0 7 chr17 59662537 59662830 -29841723 + AluJo SINE Alu 1 291 -21 2235 101 0 26 chr17 59662836 59663143 -29841410 + AluSx SINE Alu 1 299 -13 2377 82 0 7 chr17 59664496 59664801 -29839752 + AluSg SINE Alu 1 303 -7 233 308 26 0 chr17 59665024 59665102 -29839451 - MLT1K LTR MaLR 0 588 509 193 264 19 0 chr17 59665226 59665279 -29839274 + MER5A DNA MER1_type 136 189 0 238 319 118 17 chr17 59665899 59666018 -29838535 - MIR SINE MIR -46 216 86 501 175 31 10 chr17 59666365 59666462 -29838091 - MLT1A1 LTR MaLR -266 99 1 2042 5 0 5 chr17 59667172 59667392 -29837161 + AluYa5 SINE Alu 80 298 -13 2088 77 0 15 chr17 59668828 59669102 -29835451 - AluY SINE Alu 0 311 42 460 278 73 48 chr17 59669555 59669657 -29834896 - L2 LINE L2 -1237 2077 1979 2370 82 3 0 chr17 59669657 59669951 -29834602 + AluSp SINE Alu 3 297 -16 460 278 73 48 chr17 59669951 59670096 -29834457 - L2 LINE L2 -1335 1979 1824 586 143 66 0 chr17 59670129 59670220 -29834333 - MER58B DNA MER1_type -19 322 226 2472 134 8 97 chr17 59670227 59670703 -29833850 - Tigger2 DNA MER2_type 0 2718 1 887 214 82 0 chr17 59670733 59670915 -29833638 - MER58B DNA MER1_type -144 197 1 2486 68 6 0 chr17 59670986 59671297 -29833256 + AluSp SINE Alu 1 313 0 232 387 25 8 chr17 59671317 59671436 -29833117 + L2 LINE L2 3152 3272 0 343 231 19 0 chr17 59671846 59671954 -29832599 + (CA)n Simple_repeat Simple_repeat 2 111 0 413 291 56 27 chr17 59672723 59672923 -29831630 + MIR SINE MIR 8 219 -43 416 219 84 58 chr17 59674707 59674862 -29829691 - MIR SINE MIR -51 211 53 23 0 0 0 chr17 59677084 59677107 -29827446 + AT_rich Low_complexity Low_complexity 1 23 0 619 280 90 0 chr17 59677574 59677774 -29826779 - MIR SINE MIR -43 219 2 269 365 77 0 chr17 59677872 59677976 -29826577 - L2 LINE L2 -27 3245 3134 1742 182 7 0 chr17 59678627 59678923 -29825630 + AluJb SINE Alu 1 298 -14 3667 211 37 52 chr17 59679137 59680234 -29824319 + L1ME1 LINE L1 5075 6149 -17 1746 123 27 57 chr17 59680248 59680549 -29824004 - AluSx SINE Alu -20 292 1 25 0 0 0 chr17 59680760 59680785 -29823768 + AT_rich Low_complexity Low_complexity 1 25 0 2485 65 0 16 chr17 59682142 59682448 -29822105 + AluY SINE Alu 1 301 -10 296 146 0 0 chr17 59682468 59682516 -29822037 + MIR SINE MIR 68 115 -147 688 301 21 5 chr17 59682859 59683045 -29821508 - MIR3 SINE MIR -6 202 14 474 298 13 33 chr17 59683375 59683526 -29821027 - MIR SINE MIR -113 149 2 232 282 14 0 chr17 59683579 59683650 -29820903 - MLT1K LTR MaLR 0 588 517 1232 166 36 70 chr17 59683888 59684190 -29820363 - L1MA10 LINE L1 -1 6333 6042 257 146 0 0 chr17 59684191 59684232 -29820321 + L1MA9 LINE L1 6001 6041 -271 2471 76 0 0 chr17 59684415 59684716 -29819837 - AluY SINE Alu -10 301 1 693 188 0 22 chr17 59684742 59684880 -29819673 - FRAM SINE Alu -2 174 40 346 291 43 43 chr17 59684920 59685037 -29819516 + MER63A DNA MER1_type 91 207 -3 205 245 0 20 chr17 59685146 59685195 -29819358 - L2 LINE L2 -4 3309 3262 26 30 0 0 chr17 59685427 59685460 -29819093 + AT_rich Low_complexity Low_complexity 1 33 0 1337 175 29 12 chr17 59685471 59685711 -29818842 - AluJb SINE Alu -3 309 66 451 102 0 0 chr17 59685711 59685770 -29818783 + AluSx SINE Alu 2 60 -258 532 284 135 46 chr17 59685871 59686015 -29818538 - L2 LINE L2 -56 3257 3127 2124 123 59 42 chr17 59686015 59686373 -29818180 + THE1B LTR MaLR 1 364 0 12476 92 4 6 chr17 59686373 59687956 -29816597 + THE1B-int LTR MaLR 1 1580 0 2295 111 66 26 chr17 59687956 59688306 -29816247 + THE1B LTR MaLR 1 364 0 532 284 135 46 chr17 59688306 59688462 -29816091 - L2 LINE L2 -185 3128 2928 991 178 0 0 chr17 59688472 59688624 -29815929 + FRAM SINE Alu 9 160 -16 768 221 14 0 chr17 59688773 59688918 -29815635 + MER5A DNA MER1_type 42 188 -1 1617 328 98 24 chr17 59688919 59689939 -29814614 - L2 LINE L2 -504 2810 1715 386 244 11 128 chr17 59690901 59691032 -29813521 - MER5B DNA MER1_type -3 175 69 2146 103 0 0 chr17 59691032 59691304 -29813249 + AluSx SINE Alu 39 310 -2 386 244 11 128 chr17 59691304 59691352 -29813201 - MER5B DNA MER1_type -109 69 17 27 29 0 0 chr17 59691543 59691577 -29812976 + AT_rich Low_complexity Low_complexity 1 34 0 362 272 104 70 chr17 59691870 59692471 -29812082 - L1MEd LINE L1 -847 1643 1024 26 0 0 0 chr17 59692515 59692541 -29812012 + AT_rich Low_complexity Low_complexity 1 26 0 373 268 89 0 chr17 59693207 59693319 -29811234 + MER58 DNA MER1_type 2 123 -92 257 378 22 0 chr17 59693591 59693726 -29810827 - L2 LINE L2 -558 2756 2619 356 184 272 16 chr17 59693772 59693897 -29810656 - MER103 DNA DNA -7 159 3 249 191 95 16 chr17 59694049 59694112 -29810441 + MIR3 SINE MIR 87 154 -54 269 246 33 0 chr17 59694303 59694364 -29810189 + MLT1G1 LTR MaLR 1 63 -532 260 68 0 23 chr17 59695002 59695046 -29809507 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 534 304 119 34 chr17 59695958 59696346 -29808207 - L1MEd LINE L1 -5670 449 29 3519 152 51 70 chr17 59696382 59696481 -29808072 - L1MB5 LINE L1 0 6174 6075 2121 110 30 0 chr17 59696481 59696780 -29807773 + AluSx SINE Alu 1 308 -4 3519 152 51 70 chr17 59696780 59696799 -29807754 - L1MB5 LINE L1 -99 6075 6057 2380 143 26 87 chr17 59696799 59697034 -29807519 - Tigger2a DNA MER2_type -2274 434 186 2326 92 7 3 chr17 59697034 59697338 -29807215 + AluY SINE Alu 1 305 -6 1782 154 44 20 chr17 59697348 59697641 -29806912 + AluJb SINE Alu 1 300 -12 2380 143 26 87 chr17 59697641 59697854 -29806699 - Tigger2a DNA MER2_type -2531 177 3 3519 152 51 70 chr17 59697854 59698535 -29806018 - L1MB5 LINE L1 -117 6057 5389 22 0 0 0 chr17 59698545 59698567 -29805986 + AT_rich Low_complexity Low_complexity 1 22 0 2036 109 0 0 chr17 59698567 59698834 -29805719 - AluSx SINE Alu -10 302 36 836 129 7 57 chr17 59698857 59698997 -29805556 + AluSc SINE Alu 130 262 -47 221 0 35 0 chr17 59699008 59699037 -29805516 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 308 301 199 16 chr17 59699038 59699224 -29805329 + L2 LINE L2 2708 2927 -387 1413 108 0 0 chr17 59699291 59699486 -29805067 - AluSg/x SINE Alu 0 312 118 677 252 39 19 chr17 59699936 59700142 -29804411 - LTR33 LTR ERVL -309 212 3 2212 114 3 0 chr17 59700245 59700553 -29804000 + AluSx SINE Alu 1 309 -3 241 353 69 0 chr17 59700892 59700994 -29803559 + MER117 DNA MER1_type 81 189 -8 207 0 0 0 chr17 59701080 59701103 -29803450 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 240 355 106 7 chr17 59701345 59701486 -29803067 - MIR3 SINE MIR -14 194 40 226 278 155 21 chr17 59702890 59702987 -29801566 - MIR SINE MIR -29 233 124 887 245 53 0 chr17 59703140 59703328 -29801225 + MER58A DNA MER1_type 26 223 -1 325 273 8 74 chr17 59703864 59703985 -29800568 - MER5A DNA MER1_type 0 189 77 212 273 57 68 chr17 59704261 59704349 -29800204 - MIR SINE MIR -57 205 119 1579 175 19 39 chr17 59705046 59705176 -29799377 + AluJo SINE Alu 1 132 -180 2017 142 0 7 chr17 59705176 59705503 -29799050 + AluSx SINE Alu 1 325 0 1579 175 19 39 chr17 59705503 59705678 -29798875 + AluJo SINE Alu 132 302 -10 395 216 52 124 chr17 59705826 59706020 -29798533 + MIR SINE MIR 77 256 -6 1977 141 0 10 chr17 59706136 59706440 -29798113 + AluJb SINE Alu 1 301 -11 2518 71 0 0 chr17 59706582 59706878 -29797675 + AluSp SINE Alu 1 296 -17 241 218 178 0 chr17 59706928 59707029 -29797524 + L1ME LINE L1 5709 5827 -294 299 340 175 30 chr17 59708399 59708599 -29795954 + MIR SINE MIR 20 248 -14 2402 102 0 0 chr17 59708954 59709258 -29795295 + AluSx SINE Alu 1 304 -8 288 111 0 0 chr17 59709551 59709596 -29794957 + (T)n Simple_repeat Simple_repeat 1 45 0 1456 177 0 0 chr17 59709834 59710054 -29794499 + AluSx SINE Alu 1 220 -92 180 0 0 0 chr17 59710054 59710074 -29794479 + (CAGTG)n Simple_repeat Simple_repeat 3 22 0 199 206 0 0 chr17 59710079 59710113 -29794440 + MIR SINE MIR 216 249 -13 272 239 15 165 chr17 59710219 59710322 -29794231 - MIR SINE MIR -8 254 212 1539 149 4 24 chr17 59710322 59710571 -29793982 - AluJo SINE Alu -34 278 35 272 239 15 165 chr17 59710571 59710706 -29793847 - MIR SINE MIR -50 212 58 1035 206 0 5 chr17 59710755 59710939 -29793614 - AluJo SINE Alu -129 183 1 1317 252 138 42 chr17 59710951 59711575 -29792978 + L1MC4a LINE L1 5341 6024 -1784 457 272 116 37 chr17 59711649 59711976 -29792577 - L1MC4a LINE L1 -1630 6178 5826 1970 125 0 40 chr17 59712598 59712902 -29791651 - AluSx SINE Alu -20 292 1 386 292 80 0 chr17 59712977 59713090 -29791463 - MIR SINE MIR -92 170 49 714 278 19 56 chr17 59713167 59713437 -29791116 - L1ME1 LINE L1 -15 6151 5892 1462 209 92 114 chr17 59713456 59713935 -29790618 - L1MDb LINE L1 -3648 2892 2404 369 0 0 0 chr17 59713935 59713976 -29790577 + (TG)n Simple_repeat Simple_repeat 1 41 0 1462 209 92 114 chr17 59713976 59714192 -29790361 - L1MDb LINE L1 -4136 2404 2185 2108 107 4 4 chr17 59714192 59714508 -29790045 + AluY SINE Alu 1 316 0 1462 209 92 114 chr17 59714508 59714661 -29789892 - L1MDb LINE L1 -4355 2185 2030 2262 98 0 16 chr17 59714661 59714976 -29789577 + AluSx SINE Alu 1 310 -2 1462 209 92 114 chr17 59714976 59715401 -29789152 - L1MDb LINE L1 -4510 2030 1644 1510 226 50 56 chr17 59715408 59715873 -29788680 - MLT1C LTR MaLR 0 467 6 1866 220 54 32 chr17 59715880 59716620 -29787933 - L1MDb LINE L1 -4902 1638 917 303 354 67 25 chr17 59717131 59717447 -29787106 - L1MDb LINE L1 -6211 329 1 2395 235 198 42 chr17 59717961 59719268 -29785285 + L2 LINE L2 1791 3311 -2 1541 176 20 30 chr17 59719535 59719830 -29784723 - AluJo SINE Alu -19 293 2 2913 140 47 57 chr17 59721320 59722155 -29782398 - MER21A LTR ERV1 0 931 1 465 280 76 13 chr17 59722155 59722311 -29782242 + Charlie8 DNA MER1_type 93 258 -2159 758 291 94 50 chr17 59722464 59722767 -29781786 - MER21A-int LTR ERV1 -65 6611 6276 2021 118 24 7 chr17 59722767 59723064 -29781489 + AluSg SINE Alu 1 302 -8 758 291 94 50 chr17 59723064 59723259 -29781294 - MER21A-int LTR ERV1 -400 6276 6091 1031 140 64 6 chr17 59723592 59723763 -29780790 + AluJo SINE Alu 1 181 -131 891 172 83 6 chr17 59723863 59724043 -29780510 + AluJo SINE Alu 106 299 -13 283 233 140 54 chr17 59724373 59724585 -29779968 - MER66-int LTR ERV1 -4021 3054 2470 459 332 51 12 chr17 59725443 59725696 -29778857 - MER66-int LTR ERV1 -5022 1654 1392 1494 185 17 42 chr17 59726818 59726979 -29777574 - AluJb SINE Alu -21 291 139 1815 151 3 17 chr17 59726979 59727271 -29777282 - AluSx SINE Alu -24 288 1 1494 185 17 42 chr17 59727271 59727396 -29777157 - AluJb SINE Alu -173 139 12 567 307 196 53 chr17 59728455 59729111 -29775442 - L2 LINE L2 -33 3280 2719 2152 121 10 0 chr17 59729111 59729409 -29775144 + AluSq SINE Alu 1 301 -12 567 307 196 53 chr17 59729409 59729914 -29774639 - L2 LINE L2 -594 2719 1162 953 190 25 0 chr17 59729992 59730155 -29774398 + AluJb SINE Alu 137 303 -9 1805 180 3 3 chr17 59730277 59730577 -29773976 - AluJb SINE Alu -12 300 1 2242 107 0 7 chr17 59730741 59731041 -29773512 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr17 59733273 59733297 -29771256 + AT_rich Low_complexity Low_complexity 1 24 0 1988 89 0 11 chr17 59736236 59736507 -29768046 + AluY SINE Alu 30 297 -14 1129 152 0 49 chr17 59737098 59737322 -29767231 - MER20 DNA MER1_type 0 219 7 936 76 8 0 chr17 59737557 59737675 -29766878 + FLAM_C SINE Alu 4 122 -21 279 0 0 0 chr17 59737703 59737734 -29766819 + (CA)n Simple_repeat Simple_repeat 1 31 0 377 244 92 49 chr17 59737785 59737949 -29766604 - MER5B DNA MER1_type -6 172 2 373 271 33 53 chr17 59737965 59738116 -29766437 + MER5B DNA MER1_type 30 177 -1 619 148 38 148 chr17 59738167 59738377 -29766176 - MER5A DNA MER1_type -2 187 1 199 349 48 0 chr17 59738734 59738817 -29765736 + MIR SINE MIR 45 131 -77 385 318 47 14 chr17 59740077 59740225 -29764328 + MIR SINE MIR 5 157 -105 189 237 51 17 chr17 59740340 59740399 -29764154 - MIR SINE MIR -108 154 94 * 643 293 99 29 chr17 59740397 59740925 -29763628 - L2 LINE L2 -6 3307 2737 265 240 10 21 chr17 59741778 59741874 -29762679 - L1MC4 LINE L1 -198 7844 7750 1393 202 60 21 chr17 59741881 59742213 -29762340 - MLT1A2 LTR MaLR -5 369 25 2967 204 76 76 chr17 59742233 59742413 -29762140 - L1MC4 LINE L1 -292 7750 7571 681 184 64 0 chr17 59742413 59742538 -29762015 - FLAM_C SINE Alu 0 133 1 2967 204 76 76 chr17 59742538 59743357 -29761196 - L1MC4 LINE L1 -470 7572 6751 291 250 0 0 chr17 59743416 59743476 -29761077 - L1MC4 LINE L1 -1524 6518 6459 295 325 34 43 chr17 59743773 59743890 -29760663 - MIR SINE MIR -77 131 16 422 225 0 0 chr17 59745172 59745243 -29759310 + MER45A DNA AcHobo 1 71 -107 2480 180 20 11 chr17 59745244 59745700 -29758853 - MER66B LTR ERV1 0 486 27 287 228 18 0 chr17 59745702 59745759 -29758794 + MER45A DNA AcHobo 47 104 -74 1211 104 0 18 chr17 59745760 59745924 -29758629 - AluSg/x SINE Alu -18 294 134 521 139 0 0 chr17 59745924 59746003 -29758550 + MER45A DNA AcHobo 100 178 0 672 287 198 25 chr17 59746299 59746761 -29757792 + L2 LINE L2 2776 3313 0 3235 123 16 18 chr17 59746931 59747165 -29757388 + LOR1a LTR ERV1 1 234 -263 2137 163 0 3 chr17 59747165 59747503 -29757050 + MER1B DNA MER1_type 1 337 0 3235 123 16 18 chr17 59747503 59747766 -29756787 + LOR1a LTR ERV1 234 497 0 1558 181 74 19 chr17 59747878 59748203 -29756350 - MER2 DNA MER2_type 0 344 2 223 328 56 32 chr17 59748776 59748901 -29755652 - MIR3 SINE MIR -4 204 77 202 208 38 0 chr17 59749358 59749411 -29755142 + A-rich Low_complexity Low_complexity 2 56 0 25 31 0 0 chr17 59749439 59749471 -29755082 + AT_rich Low_complexity Low_complexity 1 32 0 339 360 0 0 chr17 59749524 59749649 -29754904 - L1ME LINE L1 -298 5823 5699 308 119 0 0 chr17 59750199 59750241 -29754312 + 5S rRNA rRNA 1 42 -79 21 36 0 0 chr17 59750910 59750938 -29753615 + AT_rich Low_complexity Low_complexity 1 28 0 1603 123 124 29 chr17 59750970 59751404 -29753149 - MER51A LTR ERV1 0 634 1 1306 124 29 75 chr17 59751443 59751684 -29752869 - MER30 DNA MER1_type 0 230 1 712 283 103 34 chr17 59751700 59752723 -29751830 + L1ME4a LINE L1 4487 5593 -784 338 74 19 0 chr17 59753209 59753263 -29751290 + (TG)n Simple_repeat Simple_repeat 2 56 0 388 313 55 22 chr17 59753529 59753711 -29750842 + MIR SINE MIR 2 189 -73 233 370 71 16 chr17 59754091 59754218 -29750335 - MIR SINE MIR -79 183 50 2582 48 3 7 chr17 59754947 59755257 -29749296 - AluY SINE Alu -2 309 1 249 304 42 92 chr17 59755454 59755694 -29748859 - HAL1 LINE L1 -2279 228 1 465 189 25 41 chr17 59755697 59755819 -29748734 - L1MA10 LINE L1 -1 6333 6214 219 36 0 0 chr17 59755945 59755973 -29748580 + (CAA)n Simple_repeat Simple_repeat 2 29 0 227 322 35 0 chr17 59756005 59756092 -29748461 + MIR3 SINE MIR 111 200 -8 970 211 0 0 chr17 59757089 59757260 -29747293 + FAM SINE Alu 3 173 -2 23 86 0 0 chr17 59757306 59757364 -29747189 + AT_rich Low_complexity Low_complexity 1 58 0 661 247 266 28 chr17 59757369 59757802 -29746751 - MLT1H LTR MaLR 0 549 14 234 220 0 17 chr17 59757940 59757999 -29746554 + (TA)n Simple_repeat Simple_repeat 2 59 0 1824 238 38 63 chr17 59758021 59758576 -29745977 - L1MC4a LINE L1 -1879 5929 5389 351 287 88 72 chr17 59758593 59758900 -29745653 + L1ME4a LINE L1 5717 6028 -93 2143 101 17 3 chr17 59759106 59759403 -29745150 + AluSx SINE Alu 1 301 -11 2178 79 43 0 chr17 59759728 59760008 -29744545 - AluY SINE Alu -19 292 1 186 346 98 33 chr17 59760141 59760294 -29744259 + MIR SINE MIR 76 238 -24 2961 123 98 36 chr17 59760843 59761341 -29743212 + MER1A DNA MER1_type 1 529 0 27 29 0 0 chr17 59762320 59762354 -29742199 + AT_rich Low_complexity Low_complexity 1 34 0 39 22 0 0 chr17 59762404 59762450 -29742103 + AT_rich Low_complexity Low_complexity 1 46 0 1632 175 14 14 chr17 59762746 59763043 -29741510 + AluJo SINE Alu 1 297 -15 36 77 0 0 chr17 59763080 59763158 -29741395 + AT_rich Low_complexity Low_complexity 1 78 0 222 62 0 0 chr17 59763200 59763232 -29741321 + (TG)n Simple_repeat Simple_repeat 2 33 0 2180 125 0 10 chr17 59763319 59763623 -29740930 - AluSx SINE Alu -7 305 5 818 191 40 0 chr17 59763951 59764103 -29740450 + FRAM SINE Alu 2 159 -17 489 314 58 83 chr17 59764865 59765228 -29739325 + L2 LINE L2 2245 2598 -716 331 360 26 20 chr17 59765651 59765804 -29738749 + L2 LINE L2 3116 3269 -3 252 212 12 47 chr17 59766062 59766147 -29738406 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 228 362 55 38 chr17 59766764 59766999 -29737554 - L2 LINE L2 -210 3062 2824 392 258 179 0 chr17 59767163 59767314 -29737239 - MIR SINE MIR -15 247 70 407 61 61 10 chr17 59768143 59768233 -29736320 + (TA)n Simple_repeat Simple_repeat 2 99 -5 1490 183 70 7 chr17 59768233 59768506 -29736047 - AluJo SINE Alu -22 290 1 407 61 61 10 chr17 59768506 59768513 -29736040 + (TA)n Simple_repeat Simple_repeat 99 104 0 961 119 0 0 chr17 59769322 59769448 -29735105 + FLAM_C SINE Alu 1 126 -17 26 0 0 0 chr17 59769452 59769478 -29735075 + AT_rich Low_complexity Low_complexity 1 26 0 1776 67 0 18 chr17 59772330 59772554 -29731999 - AluY SINE Alu -91 220 1 28 0 0 0 chr17 59772854 59772882 -29731671 + AT_rich Low_complexity Low_complexity 1 28 0 279 283 40 9 chr17 59773316 59773499 -29731054 + MIR SINE MIR 9 252 -10 200 433 43 16 chr17 59773663 59773850 -29730703 - L2 LINE L2 -215 3057 2866 2117 113 0 36 chr17 59774508 59774817 -29729736 + AluSx SINE Alu 1 298 -14 1886 150 4 0 chr17 59775038 59775312 -29729241 + AluJb SINE Alu 1 275 -37 413 150 44 9 chr17 59775328 59775441 -29729112 + GA-rich Low_complexity Low_complexity 5 121 0 215 215 77 31 chr17 59775809 59775874 -29728679 - MIR SINE MIR -75 187 120 444 305 59 11 chr17 59775896 59776083 -29728470 + MIR SINE MIR 18 213 -49 2197 103 16 19 chr17 59778321 59778631 -29725922 + AluSx SINE Alu 2 310 -2 1499 189 107 45 chr17 59779699 59780118 -29724435 - MER39 LTR ERV1 -2 705 261 253 326 22 0 chr17 59780092 59780184 -29724369 - LTR48B LTR ERV1 -540 104 11 * 198 0 0 0 chr17 59781304 59781326 -29723227 + (TAAAA)n Simple_repeat Simple_repeat 1 22 0 231 217 0 0 chr17 59781514 59781574 -29722979 + (TA)n Simple_repeat Simple_repeat 2 61 0 41 21 0 0 chr17 59782493 59782541 -29722012 + AT_rich Low_complexity Low_complexity 1 48 0 249 83 0 0 chr17 59782758 59782794 -29721759 + (T)n Simple_repeat Simple_repeat 1 36 0 2489 54 35 3 chr17 59782794 59783110 -29721443 - LTR17 LTR ERV1 -454 326 1 2397 51 0 0 chr17 59783110 59783402 -29721151 - HERV17 LTR ERV1 0 8626 8335 286 77 0 0 chr17 59783392 59783431 -29721122 - HERV17 LTR ERV1 -1078 7548 7510 * 291 0 0 0 chr17 59783424 59783456 -29721097 - HERV17 LTR ERV1 -2607 6019 5988 47432 47 16 2 chr17 59783472 59789265 -29715288 - HERV17 LTR ERV1 -2755 5871 1 3681 75 46 2 chr17 59789265 59789768 -29714785 - LTR17 LTR ERV1 0 780 256 1155 202 114 64 chr17 59789808 59790229 -29714324 - LTR7 LTR ERV1 -8 442 1 257 309 0 12 chr17 59790245 59790326 -29714227 + L2 LINE L2 3234 3313 0 325 279 35 89 chr17 59790398 59790656 -29713897 - L1MEd LINE L1 -3990 2139 1896 609 278 67 37 chr17 59790859 59791585 -29712968 - L1MEd LINE L1 -4579 1731 942 207 0 0 0 chr17 59791717 59791740 -29712813 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 2152 108 3 0 chr17 59791805 59792093 -29712460 + AluSq SINE Alu 1 289 -24 299 298 133 21 chr17 59792282 59792470 -29712083 - L1MEd LINE L1 -5637 482 274 1586 166 32 11 chr17 59792514 59792792 -29711761 + AluJo SINE Alu 5 288 -24 415 312 75 5 chr17 59793123 59793322 -29711231 + L1ME LINE L1 5574 5786 -335 584 312 164 40 chr17 59793700 59794218 -29710335 - L2 LINE L2 -5 3308 2721 312 333 41 51 chr17 59794479 59794546 -29710007 + L1ME3 LINE L1 2 68 -6051 1444 168 68 48 chr17 59794546 59794898 -29709655 - MER46B DNA MER2_type -2 234 1 312 333 41 51 chr17 59794898 59795025 -29709528 + L1ME3 LINE L1 68 194 -5925 240 35 0 0 chr17 59795187 59795216 -29709337 + (A)n Simple_repeat Simple_repeat 1 29 0 411 309 162 24 chr17 59795219 59795559 -29708994 + L1MC/D LINE L1 5271 5657 -509 699 295 17 29 chr17 59795679 59795920 -29708633 + MLT1I LTR MaLR 170 407 -2 268 227 47 50 chr17 59795922 59796069 -29708484 + L1MC/D LINE L1 5688 5827 -335 2433 54 0 14 chr17 59796126 59796422 -29708131 + AluY SINE Alu 1 292 -19 21 0 0 0 chr17 59796422 59796443 -29708110 + AT_rich Low_complexity Low_complexity 1 21 0 586 266 27 9 chr17 59796452 59796674 -29707879 + L1ME3 LINE L1 3286 3511 -2618 3182 204 39 69 chr17 59796677 59797605 -29706948 + L1ME3 LINE L1 3787 4686 -1443 1947 305 82 21 chr17 59797622 59798644 -29705909 + L1PBa LINE L1 3 1086 -5777 1103 135 45 10 chr17 59798644 59798844 -29705709 + L1PB3 LINE L1 5948 6154 0 22 0 0 0 chr17 59799216 59799238 -29705315 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr17 59799416 59799445 -29705108 + AT_rich Low_complexity Low_complexity 1 29 0 316 281 135 62 chr17 59799504 59799792 -29704761 + L1ME4a LINE L1 5704 6012 -109 437 181 21 43 chr17 59799798 59799892 -29704661 + MER20 DNA MER1_type 1 92 -127 21 36 0 0 chr17 59799937 59799965 -29704588 + AT_rich Low_complexity Low_complexity 1 28 0 630 296 68 52 chr17 59799978 59800484 -29704069 + L1ME3 LINE L1 5351 5866 -287 22 70 0 0 chr17 59800670 59800713 -29703840 + AT_rich Low_complexity Low_complexity 1 43 0 390 277 50 38 chr17 59801029 59801188 -29703365 + L2 LINE L2 3149 3309 -4 900 293 38 81 chr17 59801338 59801867 -29702686 - MLT1J LTR MaLR 0 511 6 1150 231 13 0 chr17 59802933 59803167 -29701386 + MER8 DNA MER2_type 2 238 -1 245 261 0 14 chr17 59803343 59803412 -29701141 - L1ME LINE L1 -523 5598 5531 988 240 13 63 chr17 59804128 59804361 -29700192 + HAL1 LINE L1 739 948 -1559 2172 112 0 0 chr17 59804361 59804684 -29699869 + AluSx SINE Alu 1 323 0 988 240 13 63 chr17 59804684 59804828 -29699725 + HAL1 LINE L1 948 1098 -1409 473 230 118 43 chr17 59804903 59805064 -29699489 + MIR SINE MIR 80 252 -10 501 214 44 140 chr17 59805858 59806129 -29698424 - L1ME3A LINE L1 -20 6150 5906 23 33 0 0 chr17 59806253 59806283 -29698270 + AT_rich Low_complexity Low_complexity 1 30 0 882 224 75 25 chr17 59806552 59806950 -29697603 - Charlie2 DNA MER1_type -157 2705 2288 1544 135 66 10 chr17 59807150 59807453 -29697100 - L1MA8 LINE L1 -6 6285 5966 235 307 59 0 chr17 59807524 59807625 -29696928 - L1ME LINE L1 -1560 4586 4480 27 49 0 0 chr17 59807625 59807666 -29696887 + AT_rich Low_complexity Low_complexity 1 41 0 27 81 0 0 chr17 59807710 59807772 -29696781 + AT_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr17 59808173 59808198 -29696355 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr17 59808914 59808943 -29695610 + AT_rich Low_complexity Low_complexity 1 29 0 366 217 93 31 chr17 59808973 59809102 -29695451 + MER112 DNA MER1_type 66 202 -58 735 207 162 37 chr17 59809453 59809724 -29694829 - L1ME3 LINE L1 -7 6155 5851 396 262 37 0 chr17 59810110 59810217 -29694336 - MER112 DNA MER1_type -45 215 105 1468 183 52 7 chr17 59812499 59812789 -29691764 - AluJb SINE Alu -9 303 1 229 274 65 24 chr17 59812971 59813095 -29691458 - MER103 DNA DNA -6 160 32 437 205 256 13 chr17 59813522 59813678 -29690875 + MIR SINE MIR 69 262 0 974 210 12 36 chr17 59813855 59814103 -29690450 - Charlie7 DNA MER1_type -2058 554 313 1689 176 0 34 chr17 59815106 59815429 -29689124 - AluJb SINE Alu 0 312 1 24 61 0 0 chr17 59815619 59815652 -29688901 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 59815767 59815789 -29688764 + AT_rich Low_complexity Low_complexity 1 22 0 749 184 0 22 chr17 59815789 59815925 -29688628 + FLAM_C SINE Alu 1 133 -10 562 180 0 0 chr17 59815941 59816030 -29688523 + L1MC1 LINE L1 6231 6319 -14 546 339 89 3 chr17 59816155 59816471 -29688082 - L1MC4a LINE L1 -1942 5866 5524 184 153 40 58 chr17 59817433 59817488 -29687065 - MIR SINE MIR -68 140 92 22 35 0 0 chr17 59817760 59817789 -29686764 + AT_rich Low_complexity Low_complexity 1 29 0 312 120 0 0 chr17 59818441 59818491 -29686062 + (TG)n Simple_repeat Simple_repeat 1 50 0 287 253 81 91 chr17 59818494 59818715 -29685838 + MARNA DNA Mariner 10 228 -358 242 241 0 0 chr17 59818720 59818774 -29685779 + T-rich Low_complexity Low_complexity 1 54 0 448 297 59 44 chr17 59820221 59820561 -29683992 + HAL1b LINE L1 311 655 -693 327 330 58 14 chr17 59821038 59821332 -29683221 + L1MC4 LINE L1 3395 3701 -2445 * 411 317 73 0 chr17 59821327 59821532 -29683021 + L1MC4 LINE L1 4140 4359 -1787 * 547 215 26 38 chr17 59821528 59821724 -29682829 + L1MC4 LINE L1 5274 5471 -699 2041 132 13 0 chr17 59821935 59822239 -29682314 - AluSx SINE Alu -4 308 1 755 284 114 40 chr17 59822276 59822712 -29681841 + L1MC4 LINE L1 5913 6316 -1492 222 37 0 0 chr17 59822712 59822739 -29681814 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 755 284 114 40 chr17 59822739 59822884 -29681669 + L1MC4 LINE L1 6316 6449 -1359 797 213 88 0 chr17 59822884 59823044 -29681509 + FAM SINE Alu 1 174 -1 755 284 114 40 chr17 59823044 59823188 -29681365 + L1MC4 LINE L1 6449 6616 -1192 267 193 0 35 chr17 59823266 59823323 -29681230 - Tigger5 DNA MER2_type -2268 55 1 2530 314 84 49 chr17 59823323 59824106 -29680447 + L1MC4 LINE L1 6689 7530 -512 315 0 0 0 chr17 59824106 59824141 -29680412 + (TG)n Simple_repeat Simple_repeat 1 35 0 2530 314 84 49 chr17 59824141 59824545 -29680008 + L1MC4 LINE L1 7530 7918 -124 377 230 3 2 chr17 59824730 59824830 -29679723 + L1MC4 LINE L1 7893 8036 -2 1918 155 10 7 chr17 59825394 59825697 -29678856 + AluSx SINE Alu 1 304 -8 598 285 89 5 chr17 59825728 59825942 -29678611 + MIR SINE MIR 21 252 -10 752 208 110 121 chr17 59826531 59826968 -29677585 + L2 LINE L2 2465 2896 -418 430 249 111 39 chr17 59827005 59827186 -29677367 + L2 LINE L2 3119 3312 -1 4249 175 51 98 chr17 59827278 59827811 -29676742 - Charlie5 DNA MER1_type 0 2624 2067 562 175 0 0 chr17 59827811 59827908 -29676645 + AluJb SINE Alu 203 299 -13 593 186 0 31 chr17 59827910 59828039 -29676514 + FLAM_C SINE Alu 1 125 -8 4249 175 51 98 chr17 59828039 59828721 -29675832 - Charlie5 DNA MER1_type -558 2066 1372 6647 60 6 1 chr17 59828729 59829589 -29674964 - L1PA8 LINE L1 -1 6171 5308 1653 217 156 2 chr17 59829589 59830026 -29674527 - Charlie5 DNA MER1_type -1226 1386 883 2560 184 113 36 chr17 59830031 59830817 -29673736 - Charlie5 DNA MER1_type -2490 122 1 368 226 247 14 chr17 59830824 59830970 -29673583 + MER5A DNA MER1_type 9 188 -1 1301 161 51 4 chr17 59832790 59833026 -29671527 - L1MD2 LINE L1 -309 6050 5804 613 233 8 0 chr17 59833020 59833149 -29671404 + L1MD2 LINE L1 6151 6280 -79 * 595 192 0 0 chr17 59833159 59833263 -29671290 + FLAM_C SINE Alu 18 121 -22 6057 53 1 12 chr17 59833280 59834053 -29670500 - L1PA7 LINE L1 0 6154 5390 1895 87 4 43 chr17 59835695 59835971 -29668582 - AluSg SINE Alu -23 287 23 1819 177 0 0 chr17 59837385 59837713 -29666840 - AluSx SINE Alu 0 328 1 24 67 0 0 chr17 59837733 59837778 -29666775 + AT_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr17 59837875 59837915 -29666638 + AT_rich Low_complexity Low_complexity 1 40 0 634 184 0 72 chr17 59837917 59838069 -29666484 + AluSg/x SINE Alu 136 276 -36 188 316 122 58 chr17 59839934 59840073 -29664480 - MIR SINE MIR -95 167 20 22 0 0 0 chr17 59840344 59840366 -29664187 + AT_rich Low_complexity Low_complexity 1 22 0 994 225 63 0 chr17 59841291 59841513 -29663040 + MIR SINE MIR 3 238 -24 1429 225 118 76 chr17 59842188 59842908 -29661645 + L2 LINE L2 2513 3313 0 453 281 117 24 chr17 59843298 59843525 -29661028 + MIR SINE MIR 3 251 -11 24 77 0 0 chr17 59843927 59843979 -29660574 + AT_rich Low_complexity Low_complexity 1 52 0 2118 108 3 3 chr17 59844822 59845117 -29659436 - AluSq SINE Alu -16 297 3 21 0 0 0 chr17 59845746 59845767 -29658786 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr17 59846194 59846242 -29658311 + AT_rich Low_complexity Low_complexity 1 48 0 1277 277 62 9 chr17 59846435 59846965 -29657588 - L1ME3A LINE L1 -219 5934 5377 727 262 76 0 chr17 59846966 59847138 -29657415 - MER63A DNA MER1_type 0 210 26 439 255 78 10 chr17 59847138 59847330 -29657223 - L1ME3A LINE L1 -751 5378 5174 1289 307 91 25 chr17 59847526 59848660 -29655893 - L1MEd LINE L1 -4517 1612 417 396 0 0 0 chr17 59848879 59848923 -29655630 + (TG)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr17 59848989 59849009 -29655544 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1420 184 3 62 chr17 59850674 59850979 -29653574 + AluJo SINE Alu 1 287 -25 2789 244 34 20 chr17 59853176 59853917 -29650636 - MER20B DNA MER1_type -31 752 2 1429 186 7 52 chr17 59854166 59854473 -29650080 - AluSx SINE Alu -19 293 1 24 0 0 0 chr17 59854547 59854571 -29649982 + AT_rich Low_complexity Low_complexity 1 24 0 1257 231 174 35 chr17 59854671 59855190 -29649363 - MLT1H1 LTR MaLR 0 555 13 1989 38 4 0 chr17 59855201 59855441 -29649112 - L1P3 LINE L1 -524 5630 5390 1634 103 4 55 chr17 59857098 59857370 -29647183 - AluSg SINE Alu -30 280 23 1819 177 0 0 chr17 59858784 59859107 -29645446 - AluSx SINE Alu 0 323 1 24 67 0 0 chr17 59859127 59859172 -29645381 + AT_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr17 59859269 59859309 -29645244 + AT_rich Low_complexity Low_complexity 1 40 0 634 184 0 72 chr17 59859311 59859463 -29645090 + AluSg/x SINE Alu 136 276 -36 715 143 7 64 chr17 59860158 59860298 -29644255 + FRAM SINE Alu 29 160 -16 2803 243 34 20 chr17 59862487 59863228 -29641325 - MER20B DNA MER1_type -31 752 2 1429 186 7 52 chr17 59863477 59863784 -29640769 - AluSx SINE Alu -19 293 1 24 0 0 0 chr17 59863858 59863882 -29640671 + AT_rich Low_complexity Low_complexity 1 24 0 1257 231 174 35 chr17 59863982 59864502 -29640051 - MLT1H1 LTR MaLR 0 555 13 5179 21 0 0 chr17 59864517 59865370 -29639183 - L1PA3 LINE L1 -529 5626 4774 4305 22 10 0 chr17 59865370 59865876 -29638677 + L1PA3 LINE L1 5642 6155 0 2300 122 3 0 chr17 59866765 59867125 -29637428 - L1MA5A LINE L1 0 6297 5937 4697 135 30 20 chr17 59867143 59868451 -29636102 - L1MA5A LINE L1 -507 5790 4456 2007 105 0 4 chr17 59868939 59869205 -29635348 - AluSq SINE Alu -48 265 1 199 309 32 21 chr17 59869355 59869449 -29635104 - L3 LINE CR1 -69 1508 1414 244 301 98 43 chr17 59869553 59869716 -29634837 + MIR SINE MIR 91 262 0 498 17 0 0 chr17 59871344 59871403 -29633150 + (TG)n Simple_repeat Simple_repeat 2 60 0 325 286 0 11 chr17 59871699 59871790 -29632763 + L1ME LINE L1 5523 5612 -509 1214 128 16 91 chr17 59871927 59872170 -29632383 + Tigger4(Zombi) DNA MER2_type 1 225 -2506 1191 115 64 165 chr17 59872158 59872515 -29632038 + Tigger4(Zombi) DNA MER2_type 2411 2731 0 * 1899 102 7 3 chr17 59872537 59872820 -29631733 + L1PB1 LINE L1 5863 6146 -5 225 214 79 64 chr17 59872837 59872977 -29631576 - Charlie7 DNA MER1_type -172 2440 2299 1931 137 19 3 chr17 59873491 59873798 -29630755 - AluSx SINE Alu 0 312 1 962 301 102 49 chr17 59874300 59874996 -29629557 - L2 LINE L2 -1 3312 2569 307 311 43 62 chr17 59876223 59876384 -29628169 - MIR SINE MIR -79 183 26 408 248 23 31 chr17 59876395 59876524 -29628029 + HsTC2c DNA Tc2 601 728 -1 1332 159 5 9 chr17 59876662 59876882 -29627671 - AluJb SINE Alu -9 303 85 243 294 0 59 chr17 59877437 59877522 -29627031 + L2 LINE L2 3229 3308 -5 235 280 131 19 chr17 59877768 59877875 -29626678 + MIR SINE MIR 88 206 -56 2413 62 3 0 chr17 59877892 59878183 -29626370 + AluY SINE Alu 3 294 -17 368 292 72 67 chr17 59878310 59878505 -29626048 + MIR SINE MIR 51 246 -16 200 213 0 21 chr17 59878505 59878552 -29626001 + (CAT)n Simple_repeat Simple_repeat 3 48 0 678 192 8 0 chr17 59879038 59879168 -29625385 - L2 LINE L2 -314 2999 2869 632 277 98 29 chr17 59879182 59879456 -29625097 + L2 LINE L2 3005 3297 -16 397 316 82 23 chr17 59879549 59879805 -29624748 + L1ME LINE L1 5412 5682 -439 1763 188 42 6 chr17 59879818 59880148 -29624405 - MER7A DNA MER2_type -5 341 2 180 186 93 0 chr17 59880186 59880229 -29624324 - L2 LINE L2 -4 3309 3263 204 40 0 0 chr17 59880769 59880794 -29623759 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 780 257 98 25 chr17 59881181 59881426 -29623127 + MLT1E LTR MaLR 1 263 -330 958 208 21 0 chr17 59881461 59881653 -29622900 + MLT1E LTR MaLR 397 592 -1 262 342 51 0 chr17 59882004 59882083 -29622470 + L2 LINE L2 3186 3268 -4 29401 105 13 48 chr17 59882639 59885973 -29618580 - L1PA7 LINE L1 -3 6151 3205 2301 88 0 34 chr17 59885973 59886293 -29618260 - AluY SINE Alu -2 309 1 29401 105 13 48 chr17 59886293 59889378 -29615175 - L1PA7 LINE L1 -2949 3205 12 314 325 62 82 chr17 59889871 59890093 -29614460 - L2 LINE L2 0 3272 3060 1904 189 62 62 chr17 59890093 59890140 -29614413 - MLT1D LTR MaLR -3 502 456 2184 108 0 29 chr17 59890140 59890454 -29614099 - AluSq SINE Alu -8 305 1 1904 189 62 62 chr17 59890454 59890908 -29613645 - MLT1D LTR MaLR -48 457 1 314 325 62 82 chr17 59890908 59891101 -29613452 - L2 LINE L2 -212 3060 2865 1069 188 35 10 chr17 59891101 59891303 -29613250 - MER58A DNA MER1_type -6 218 12 1141 263 143 30 chr17 59891620 59891925 -29612628 + L2 LINE L2 2618 2887 -426 2442 156 31 7 chr17 59891925 59892343 -29612210 + MSTA LTR MaLR 1 428 0 1141 263 143 30 chr17 59892343 59892411 -29612142 + L2 LINE L2 2887 2946 -367 324 0 0 0 chr17 59892411 59892447 -29612106 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1575 200 0 14 chr17 59892450 59892735 -29611818 - AluJo SINE Alu -31 281 1 1141 263 143 30 chr17 59892735 59892960 -29611593 + L2 LINE L2 2947 3313 0 815 176 79 8 chr17 59893684 59893733 -29610820 + L1MA9 LINE L1 6103 6147 -153 405 0 0 0 chr17 59893733 59893778 -29610775 + (CA)n Simple_repeat Simple_repeat 1 45 0 815 176 79 8 chr17 59893778 59893909 -29610644 + L1MA9 LINE L1 6147 6300 0 235 301 14 0 chr17 59894215 59894288 -29610265 - L1ME4a LINE L1 -81 6040 5967 509 283 29 0 chr17 59894374 59894512 -29610041 + MIR SINE MIR 2 143 -119 21 0 0 0 chr17 59897579 59897600 -29606953 + AT_rich Low_complexity Low_complexity 1 21 0 271 215 228 25 chr17 59898363 59898442 -29606111 - L2 LINE L2 -5 3267 3173 658 323 111 18 chr17 59898542 59898876 -29605677 - L2 LINE L2 0 3313 2949 1045 305 65 8 chr17 59898930 59899317 -29605236 - L2 LINE L2 -910 2404 1996 25 0 0 0 chr17 59899455 59899480 -29605073 + AT_rich Low_complexity Low_complexity 1 25 0 1018 48 0 0 chr17 59899480 59899605 -29604948 - L1PA5 LINE L1 -9 6145 6021 30 27 0 0 chr17 59900168 59900205 -29604348 + AT_rich Low_complexity Low_complexity 1 37 0 256 345 55 9 chr17 59900980 59901090 -29603463 + L3 LINE CR1 1293 1407 -170 482 303 61 48 chr17 59901194 59901359 -29603194 + MER91A DNA MER1_type 4 170 -26 231 298 110 73 chr17 59902252 59902497 -29602056 + MLT1L LTR MaLR 214 467 -148 271 407 73 23 chr17 59902684 59902984 -29601569 - L2 LINE L2 -10 3262 2948 21 0 0 0 chr17 59903291 59903312 -29601241 + AT_rich Low_complexity Low_complexity 1 21 0 2258 103 0 3 chr17 59904134 59904436 -29600117 + AluSc SINE Alu 1 301 -8 25 51 0 0 chr17 59904911 59904950 -29599603 + AT_rich Low_complexity Low_complexity 1 39 0 1229 239 30 70 chr17 59905208 59905606 -29598947 - MLT1B LTR MaLR -8 382 1 239 313 72 0 chr17 59905821 59905904 -29598649 + MIR3 SINE MIR 108 196 -12 2417 253 50 43 chr17 59905910 59906142 -29598411 + L1ME LINE L1 2 231 -5839 505 235 99 25 chr17 59906142 59906304 -29598249 - MER96 DNA MER1_type 0 175 2 2417 253 50 43 chr17 59906304 59906948 -29597605 + L1ME LINE L1 231 884 -5186 757 225 21 16 chr17 59906952 59907143 -29597410 + L1ME2 LINE L1 5963 6154 -10 229 161 109 102 chr17 59907494 59907512 -29597041 - L1MA9 LINE L1 0 6312 6295 1655 229 128 0 chr17 59907512 59907957 -29596596 - L1ME1 LINE L1 -8 6158 5657 264 258 16 0 chr17 59908676 59908738 -29595815 - L2 LINE L2 -3 3310 3248 330 26 0 0 chr17 59909112 59909151 -29595402 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1980 112 4 0 chr17 59909154 59909430 -29595123 - AluSx SINE Alu -35 277 1 2339 98 0 0 chr17 59909438 59909743 -29594810 - AluSc SINE Alu -4 305 1 215 310 20 20 chr17 59909750 59909850 -29594703 + CT-rich Low_complexity Low_complexity 1 100 0 659 223 0 8 chr17 59909965 59910095 -29594458 + FLAM_A SINE Alu 5 133 0 189 107 0 0 chr17 59910109 59910137 -29594416 + (GGGA)n Simple_repeat Simple_repeat 3 30 0 2393 166 124 59 chr17 59910277 59910857 -29593696 + MLT1E3 LTR MaLR 1 618 -6 5172 138 31 20 chr17 59910908 59911838 -29592715 - L1MA7 LINE L1 -5 6286 5347 1158 185 177 16 chr17 59912293 59912536 -29592017 - AluJb SINE Alu -18 284 3 2159 103 3 0 chr17 59912722 59913004 -29591549 - AluSg SINE Alu -27 283 1 3445 250 182 33 chr17 59913119 59914810 -29589743 - L2 LINE L2 0 3313 1344 763 237 48 31 chr17 59916451 59916679 -29587874 + MIR SINE MIR 10 241 -21 1587 205 55 8 chr17 59916879 59917245 -29587308 - MER63B DNA MER1_type -53 383 1 234 0 0 0 chr17 59917789 59917815 -29586738 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 315 246 239 0 chr17 59917922 59918056 -29586497 - L1ME LINE L1 -338 5783 5618 865 235 30 5 chr17 59918089 59918289 -29586264 + MIR SINE MIR 58 262 0 604 295 97 12 chr17 59918293 59918612 -29585941 - L1ME LINE L1 -2203 5605 5260 375 336 9 0 chr17 59918710 59918817 -29585736 + L2 LINE L2 3200 3307 -6 1666 199 0 13 chr17 59920537 59920843 -29583710 + AluJo SINE Alu 1 302 -10 198 264 135 73 chr17 59921445 59921623 -29582930 - L3 LINE CR1 -5 1572 1384 453 306 6 47 chr17 59922283 59922453 -29582100 - L2 LINE L2 -5 3308 3146 288 378 81 22 chr17 59922462 59922647 -29581906 - MIR SINE MIR -66 196 1 289 273 201 14 chr17 59922970 59923109 -29581444 + MIR SINE MIR 85 249 -13 201 202 48 125 chr17 59923597 59923701 -29580852 - MIR SINE MIR -10 252 157 332 264 96 24 chr17 59924391 59924516 -29580037 - MIR SINE MIR -100 162 29 405 0 0 0 chr17 59924521 59924566 -29579987 + (CA)n Simple_repeat Simple_repeat 1 45 0 509 291 47 17 chr17 59925365 59925537 -29579016 + MIR SINE MIR 78 254 -8 210 91 0 0 chr17 59926233 59926266 -29578287 + (TG)n Simple_repeat Simple_repeat 2 34 0 1116 232 123 90 chr17 59926756 59926945 -29577608 - MLT1F LTR MaLR -11 531 350 2405 68 0 19 chr17 59926945 59927254 -29577299 + AluY SINE Alu 1 303 -8 1116 232 123 90 chr17 59927254 59927576 -29576977 - MLT1F LTR MaLR -192 350 3 2006 162 34 6 chr17 59927678 59928006 -29576547 - MER1B DNA MER1_type 0 337 1 535 279 37 21 chr17 59928264 59928454 -29576099 + MER117 DNA MER1_type 1 193 -4 2186 108 24 0 chr17 59929050 59929347 -29575206 - AluSx SINE Alu -8 304 1 234 211 53 0 chr17 59929755 59929812 -29574741 + L2 LINE L2 3250 3309 -4 511 304 42 50 chr17 59929850 59930090 -29574463 + MIR SINE MIR 20 257 -5 1315 180 102 62 chr17 59930684 59931056 -29573497 - MLT1B LTR MaLR 0 390 4 1577 197 130 60 chr17 59931274 59931739 -29572814 + MLT1D LTR MaLR 4 588 -5 270 221 95 5 chr17 59931775 59931855 -29572698 + MIR SINE MIR 71 154 -67 201 338 128 0 chr17 59932701 59932834 -29571719 - L2 LINE L2 0 3313 3164 1746 137 55 66 chr17 59932950 59933329 -29571224 - THE1C LTR MaLR 0 375 1 470 284 85 14 chr17 59933524 59933665 -29570888 + MIR SINE MIR 3 153 -109 694 302 84 21 chr17 59934569 59934854 -29569699 - MLT1J2 LTR MaLR -84 366 64 28 99 0 0 chr17 59935371 59935462 -29569091 + AT_rich Low_complexity Low_complexity 1 91 0 455 188 158 0 chr17 59938457 59938558 -29565995 - MER103 DNA DNA -49 117 1 191 36 36 0 chr17 59938574 59938602 -29565951 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 819 181 28 28 chr17 59938602 59938746 -29565807 - FRAM SINE Alu -32 144 1 1812 165 0 4 chr17 59939482 59939792 -29564761 + AluSx SINE Alu 5 313 0 272 344 199 12 chr17 59939845 59940086 -29564467 - L2 LINE L2 -570 2744 2459 630 274 60 34 chr17 59942223 59942457 -29562096 - MIR SINE MIR -13 249 10 347 328 118 31 chr17 59942478 59942707 -29561846 + L3 LINE CR1 1327 1575 -2 310 218 64 0 chr17 59942970 59943048 -29561505 - L2 LINE L2 0 3313 3231 24 67 0 0 chr17 59943142 59943187 -29561366 + AT_rich Low_complexity Low_complexity 1 45 0 319 346 101 10 chr17 59943287 59943495 -29561058 - L1MC4a LINE L1 -1907 5901 5675 330 255 51 0 chr17 59943576 59943674 -29560879 - L1MC4a LINE L1 -2184 5624 5522 218 208 0 19 chr17 59944008 59944060 -29560493 + MIR SINE MIR 104 153 -62 233 171 0 0 chr17 59944086 59944127 -29560426 - L2 LINE L2 -8 3264 3224 2815 13 0 6 chr17 59944950 59945267 -29559286 - AluYb8 SINE Alu -3 315 1 186 139 28 0 chr17 59945348 59945384 -29559169 + L2 LINE L2 3157 3193 -79 293 369 46 15 chr17 59945384 59945514 -29559039 - L2 LINE L2 0 3272 3139 1840 209 3 11 chr17 59946158 59946526 -29558027 + MLT1A1 LTR MaLR 1 365 0 206 337 52 41 chr17 59946797 59946969 -29557584 + L2 LINE L2 2584 2757 -557 195 204 0 0 chr17 59948708 59948752 -29555801 + (TG)n Simple_repeat Simple_repeat 2 45 0 203 0 37 0 chr17 59948756 59948783 -29555770 + (CA)n Simple_repeat Simple_repeat 2 29 0 1369 281 89 13 chr17 59948989 59949605 -29554948 - HsTC2a DNA Tc2 -25 719 57 358 315 127 50 chr17 59949620 59949877 -29554676 - LTR16C LTR ERVL -30 461 167 198 0 0 0 chr17 59949877 59949899 -29554654 + (TGGGGG)n Simple_repeat Simple_repeat 1 22 0 358 315 127 50 chr17 59949899 59950003 -29554550 - LTR16C LTR ERVL -324 167 72 279 215 15 0 chr17 59950069 59950134 -29554419 - HsTC2a DNA Tc2 -678 66 1 260 226 0 0 chr17 59950597 59950659 -29553894 + L1ME4a LINE L1 5545 5606 -515 345 254 191 26 chr17 59950747 59950936 -29553617 + L1ME4a LINE L1 5727 5946 -175 21 0 0 0 chr17 59950984 59951005 -29553548 + AT_rich Low_complexity Low_complexity 1 21 0 513 325 7 7 chr17 59951769 59951920 -29552633 - L3 LINE CR1 -3 1574 1424 372 80 0 0 chr17 59952166 59952216 -29552337 + MLT1C LTR MaLR 1 50 -417 816 166 10 78 chr17 59952236 59952441 -29552112 + MLT1C LTR MaLR 277 467 0 718 221 27 0 chr17 59952744 59952893 -29551660 + MER5B DNA MER1_type 15 167 -11 195 344 21 32 chr17 59953178 59953271 -29551282 - MIR SINE MIR -81 181 90 350 179 13 26 chr17 59953290 59953368 -29551185 - MER81 DNA DNA -36 78 2 219 278 56 14 chr17 59953405 59953477 -29551076 - MIR3 SINE MIR -26 182 108 2051 214 61 0 chr17 59953737 59954228 -29550325 - L1MD2 LINE L1 -227 6132 5612 1117 217 57 116 chr17 59954233 59954758 -29549795 - MLT1D LTR MaLR -7 498 5 1646 172 29 8 chr17 59954758 59955136 -29549417 - L1MD2 LINE L1 -567 5599 5219 1026 60 15 0 chr17 59955423 59955556 -29548997 + AluY SINE Alu 166 300 -11 332 287 88 81 chr17 59956014 59956471 -29548082 - LTR33 LTR ERVL -2 519 60 230 355 51 55 chr17 59956987 59957124 -29547429 - L2 LINE L2 -455 2859 2722 2302 142 17 144 chr17 59957124 59957714 -29546839 + MLT2B2 LTR ERVL 1 515 0 230 355 51 55 chr17 59957714 59957793 -29546760 - L2 LINE L2 -592 2722 2644 * 233 313 36 40 chr17 59957771 59957933 -29546620 + MIR SINE MIR 24 188 -71 338 313 110 6 chr17 59958714 59958877 -29545676 - MIR SINE MIR -3 259 80 * 401 261 101 35 chr17 59958861 59959060 -29545493 + MIR SINE MIR 32 243 -19 1790 191 127 32 chr17 59959061 59959526 -29545027 - MLT2B1 LTR ERVL 0 520 12 1943 140 101 55 chr17 59960034 59960449 -29544104 + Tigger2a DNA MER2_type 1 434 0 345 296 152 2 chr17 59960555 59960745 -29543808 + MIR SINE MIR 36 251 -11 183 385 77 26 chr17 59961088 59961205 -29543348 - MIR SINE MIR -65 143 21 23 33 0 0 chr17 59961819 59961849 -29542704 + AT_rich Low_complexity Low_complexity 1 30 0 357 299 86 32 chr17 59962112 59962299 -29542254 + L1ME LINE L1 365 561 -5855 625 268 123 49 chr17 59962899 59963480 -29541073 + L1ME LINE L1 1153 1965 -4642 376 328 37 41 chr17 59963547 59963815 -29540738 + L1ME LINE L1 2069 2335 -4272 911 134 0 0 chr17 59963819 59963946 -29540607 + FLAM_C SINE Alu 1 127 -16 474 282 99 31 chr17 59963956 59964635 -29539918 + L1ME LINE L1 2366 3054 -3372 311 250 105 13 chr17 59964631 59964783 -29539770 - L1M4 LINE L1 -1921 4225 4060 * 22 56 0 0 chr17 59964812 59964848 -29539705 + AT_rich Low_complexity Low_complexity 1 36 0 701 256 112 0 chr17 59964854 59965096 -29539457 - L1ME3A LINE L1 -19 6151 5883 960 250 83 79 chr17 59965111 59965392 -29539161 + L1MC4 LINE L1 7502 7780 -262 1759 161 14 0 chr17 59965392 59965684 -29538869 - AluJo SINE Alu -16 296 1 960 250 83 79 chr17 59965684 59965720 -29538833 + L1MC4 LINE L1 7780 7814 -228 1338 73 0 0 chr17 59965720 59965899 -29538654 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 960 250 83 79 chr17 59965899 59966076 -29538477 + L1MC4 LINE L1 7814 7999 -43 287 332 95 52 chr17 59966254 59966465 -29538088 - L2 LINE L2 -183 3089 2870 272 130 0 0 chr17 59966729 59966775 -29537778 - Alu SINE Alu -12 290 245 626 260 37 0 chr17 59968446 59968617 -29535936 - MIR SINE MIR -32 230 55 222 308 15 15 chr17 59968641 59968706 -29535847 + L2 LINE L2 3208 3272 0 344 268 31 0 chr17 59968760 59968857 -29535696 + MIR3 SINE MIR 68 167 -41 261 297 124 10 chr17 59970312 59970476 -29534077 + MIR3 SINE MIR 3 181 -61 437 231 77 0 chr17 59970676 59970780 -29533773 - L2 LINE L2 -5 3308 3197 301 287 65 19 chr17 59971639 59971747 -29532806 - MIR SINE MIR -113 149 37 286 214 282 0 chr17 59971775 59971878 -29532675 - MER5A DNA MER1_type 0 189 58 234 301 0 24 chr17 59972091 59972174 -29532379 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 1115 263 59 17 chr17 59972217 59972575 -29531978 - MER21B LTR ERV1 -78 785 413 688 258 26 11 chr17 59973158 59973348 -29531205 - MIR SINE MIR -26 236 44 320 232 143 62 chr17 59973400 59973512 -29531041 - MIR SINE MIR -129 133 13 216 0 0 0 chr17 59974161 59974185 -29530368 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 595 286 76 19 chr17 59974563 59974773 -29529780 - MIR SINE MIR -22 240 19 188 143 24 0 chr17 59974870 59974912 -29529641 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 1464 184 52 21 chr17 59975957 59976245 -29528308 - AluJb SINE Alu -9 303 7 276 250 53 40 chr17 59976254 59976330 -29528223 + L2 LINE L2 3132 3208 -64 576 194 29 77 chr17 59976347 59976517 -29528036 + MER20 DNA MER1_type 58 219 0 247 224 0 0 chr17 59976529 59976578 -29527975 + L2 LINE L2 3265 3313 0 357 283 200 8 chr17 59977133 59977253 -29527300 + L2 LINE L2 3126 3268 -4 618 249 28 44 chr17 59977563 59977744 -29526809 + MER5B DNA MER1_type 1 178 0 2283 107 0 0 chr17 59977977 59978287 -29526266 + AluY SINE Alu 1 310 -1 1786 107 133 5 chr17 59978429 59978912 -29525641 - MER51A LTR ERV1 -18 616 1 342 309 176 25 chr17 59980260 59980756 -29523797 + L2 LINE L2 2726 3296 -17 264 267 25 9 chr17 59981075 59981168 -29523385 - MIR SINE MIR -109 99 6 22 0 0 0 chr17 59981798 59981820 -29522733 + AT_rich Low_complexity Low_complexity 1 22 0 294 175 38 0 chr17 59981886 59981966 -29522587 + GA-rich Low_complexity Low_complexity 2 84 0 23 0 0 0 chr17 59982018 59982041 -29522512 + AT_rich Low_complexity Low_complexity 1 23 0 201 154 0 0 chr17 59982941 59982980 -29521573 + (TTAAA)n Simple_repeat Simple_repeat 3 41 0 225 288 88 12 chr17 59983060 59983140 -29521413 - MIR SINE MIR -104 104 19 230 302 93 88 chr17 59983604 59983786 -29520767 + L2 LINE L2 2907 3089 -183 268 289 53 0 chr17 59984114 59984190 -29520363 + L3 LINE CR1 1313 1392 -185 344 285 74 40 chr17 59984262 59984942 -29519611 - L1MEd LINE L1 -945 1545 757 324 48 0 0 chr17 59985329 59985371 -29519182 + (CA)n Simple_repeat Simple_repeat 2 43 0 31 44 0 0 chr17 59985780 59985825 -29518728 + AT_rich Low_complexity Low_complexity 1 45 0 285 75 0 0 chr17 59986059 59986099 -29518454 + (CA)n Simple_repeat Simple_repeat 1 40 0 873 289 114 14 chr17 59986104 59986634 -29517919 + L1MC4a LINE L1 5331 5613 -508 200 257 40 0 chr17 59986665 59986739 -29517814 + (TATG)n Simple_repeat Simple_repeat 4 80 0 2311 102 7 0 chr17 59987090 59987393 -29517160 + AluSq SINE Alu 1 305 -8 246 266 35 70 chr17 59988360 59988503 -29516050 + L1ME4a LINE L1 5984 6121 0 478 220 10 0 chr17 59988910 59989010 -29515543 + MER94 DNA DNA 3 103 -31 624 129 0 0 chr17 59989048 59989149 -29515404 + (GGAA)n Simple_repeat Simple_repeat 1 101 0 1973 156 0 0 chr17 59989315 59989603 -29514950 + AluSx SINE Alu 1 288 -24 194 224 239 0 chr17 59990010 59990077 -29514476 + MIR SINE MIR 90 172 -90 204 244 47 47 chr17 59990491 59990577 -29513976 + (CATG)n Simple_repeat Simple_repeat 2 87 0 256 284 45 75 chr17 59991198 59991399 -29513154 - L1ME4a LINE L1 -132 5989 5795 1056 101 0 25 chr17 59991739 59991898 -29512655 - AluSg/x SINE Alu 0 312 158 2179 94 9 38 chr17 59992315 59992635 -29511918 - AluSx SINE Alu -1 311 1 297 250 31 31 chr17 59992687 59992783 -29511770 + MIR SINE MIR 50 145 -117 182 132 19 113 chr17 59992814 59992867 -29511686 + L2 LINE L2 3266 3313 0 1987 135 3 20 chr17 59993747 59994051 -29510502 + AluJo SINE Alu 1 299 -13 28 0 0 0 chr17 59994614 59994642 -29509911 + AT_rich Low_complexity Low_complexity 1 28 0 2428 107 0 29 chr17 59995357 59995703 -29508850 - MER1B DNA MER1_type 0 337 2 3833 161 25 38 chr17 59995799 59995916 -29508637 + MER50 LTR ERV1 1 118 -616 2185 139 0 0 chr17 59995916 59996219 -29508334 + AluSx SINE Alu 1 303 -9 3833 161 25 38 chr17 59996219 59996821 -29507732 + MER50 LTR ERV1 118 711 -23 312 255 85 28 chr17 59998203 59998309 -29506244 + L3 LINE CR1 1246 1357 -220 430 289 0 0 chr17 59998745 59998866 -29505687 - L2 LINE L2 -3 3269 3149 2266 172 24 31 chr17 59999096 59999521 -29505032 - MSTB LTR MaLR -4 422 1 310 280 19 64 chr17 60000674 60000831 -29503722 + MIR SINE MIR 5 154 -108 921 204 58 62 chr17 60000840 60001100 -29503453 + MLT1J1 LTR MaLR 34 292 -154 3525 51 11 28 chr17 60001184 60001652 -29502901 - L1PB1 LINE L1 0 6151 5692 268 245 21 53 chr17 60001666 60001760 -29502793 + MIR SINE MIR 172 262 0 646 231 28 52 chr17 60002501 60002713 -29501840 + L2 LINE L2 3103 3309 -4 184 378 154 0 chr17 60003094 60003237 -29501316 + L3 LINE CR1 342 506 -1071 555 296 25 5 chr17 60003296 60003492 -29501061 + L3 LINE CR1 652 851 -726 1684 163 64 0 chr17 60003651 60003934 -29500619 - AluJo SINE Alu -11 301 1 2231 113 10 0 chr17 60004588 60004890 -29499663 + AluSx SINE Alu 1 305 -7 7085 30 0 0 chr17 60006989 60007906 -29496647 - L1PA4 LINE L1 -83 6072 5156 521 58 0 0 chr17 60007906 60007973 -29496580 + L1PA4 LINE L1 6084 6152 -3 278 364 43 7 chr17 60008370 60008510 -29496043 + L2 LINE L2 3126 3270 -2 669 25 0 0 chr17 60008807 60008886 -29495667 + (CATAG)n Simple_repeat Simple_repeat 2 80 0 280 324 22 22 chr17 60009103 60009242 -29495311 - MIR SINE MIR -19 243 105 548 292 72 13 chr17 60009303 60009539 -29495014 - MIR SINE MIR 0 262 13 2000 250 50 51 chr17 60010006 60010259 -29494294 + L2 LINE L2 2335 2587 -726 1009 177 14 36 chr17 60010259 60010479 -29494074 - MER20 DNA MER1_type -4 215 1 2000 250 50 51 chr17 60010479 60011186 -29493367 + L2 LINE L2 2587 3311 -2 288 285 97 14 chr17 60011903 60012047 -29492506 + MIR SINE MIR 107 262 0 324 0 0 0 chr17 60012289 60012325 -29492228 + (CA)n Simple_repeat Simple_repeat 2 37 0 189 231 0 144 chr17 60012810 60012914 -29491639 + MIR SINE MIR 174 262 0 709 266 125 51 chr17 60012994 60013306 -29491247 + MLT1I LTR MaLR 3 337 -72 1899 151 0 27 chr17 60013306 60013417 -29491136 + AluJo SINE Alu 1 113 -199 2223 112 19 50 chr17 60013417 60013793 -29490760 + THE1B LTR MaLR 1 364 0 1899 151 0 27 chr17 60013793 60013979 -29490574 + AluJo SINE Alu 113 290 -22 320 241 48 0 chr17 60013994 60014077 -29490476 + MLT1I LTR MaLR 323 409 0 314 219 0 0 chr17 60015415 60015479 -29489074 - MER96 DNA MER1_type? -94 81 18 2203 89 0 7 chr17 60016108 60016390 -29488163 - AluSg SINE Alu -30 280 1 2071 127 7 3 chr17 60017286 60017594 -29486959 - AluSx SINE Alu -3 309 1 320 282 109 23 chr17 60017608 60017782 -29486771 + MLT1K LTR MaLR 382 570 -18 551 295 59 56 chr17 60018317 60018673 -29485880 - L1MC4a LINE L1 -1849 5959 5603 306 0 0 0 chr17 60019562 60019596 -29484957 + (CTG)n Simple_repeat Simple_repeat 1 34 0 189 274 0 107 chr17 60019857 60019941 -29484612 - L2 LINE L2 -254 3018 2944 339 288 86 27 chr17 60019941 60020198 -29484355 - L1ME LINE L1 -306 5815 5544 2391 165 16 0 chr17 60021081 60021512 -29483041 - L1MB1 LINE L1 -1 6167 5730 278 264 11 11 chr17 60021520 60021611 -29482942 + MIR SINE MIR 172 262 0 1770 185 20 0 chr17 60021957 60022255 -29482298 - AluJb SINE Alu -8 304 1 2427 123 26 23 chr17 60022373 60022762 -29481791 - MLT1B LTR MaLR 0 390 1 1128 195 26 0 chr17 60075235 60075430 -29429123 + Tigger3(Golem) DNA MER2_type 1 200 -2829 1030 253 133 25 chr17 60075578 60075970 -29428583 + L2 LINE L2 2878 3311 -2 277 292 97 14 chr17 60076687 60076831 -29427722 + MIR SINE MIR 107 262 0 248 0 0 30 chr17 60077075 60077108 -29427445 + (CA)n Simple_repeat Simple_repeat 2 33 0 668 268 125 54 chr17 60077781 60078094 -29426459 + MLT1I LTR MaLR 3 337 -72 1869 151 0 30 chr17 60078097 60078208 -29426345 + AluJo SINE Alu 1 114 -198 2163 111 19 56 chr17 60078208 60078586 -29425967 + THE1B LTR MaLR 1 364 0 1869 151 0 30 chr17 60078586 60078773 -29425780 + AluJo SINE Alu 114 290 -22 320 241 48 0 chr17 60078788 60078871 -29425682 + MLT1I LTR MaLR 323 409 0 294 215 0 15 chr17 60080224 60080289 -29424264 - MER96 DNA MER1_type? -94 81 18 2230 82 0 7 chr17 60080924 60081206 -29423347 - AluSg SINE Alu -30 280 1 2019 129 7 10 chr17 60082108 60082418 -29422135 - AluSx SINE Alu -3 309 1 304 286 109 29 chr17 60082432 60082607 -29421946 + MLT1K LTR MaLR 382 570 -18 556 300 56 56 chr17 60083148 60083505 -29421048 - L1MC4a LINE L1 -1849 5959 5603 203 206 16 32 chr17 60083644 60083707 -29420846 + (CCCCG)n Simple_repeat Simple_repeat 4 65 0 279 0 0 0 chr17 60084401 60084432 -29420121 + (CTG)n Simple_repeat Simple_repeat 1 31 0 189 274 0 107 chr17 60084694 60084778 -29419775 - L2 LINE L2 -254 3018 2944 295 301 76 38 chr17 60084778 60085040 -29419513 - L1ME LINE L1 -306 5815 5544 2268 167 14 9 chr17 60085936 60086372 -29418181 - L1MB1 LINE L1 -1 6167 5730 278 264 11 11 chr17 60086380 60086471 -29418082 + MIR SINE MIR 172 262 0 1658 178 20 16 chr17 60086817 60087120 -29417433 - AluJb SINE Alu -8 304 1 282 208 0 0 chr17 60087075 60087142 -29417411 - AluJ/monomer SINE Alu -255 45 1 2388 130 18 25 chr17 60087242 60087635 -29416918 - MLT1B LTR MaLR 0 390 1 348 244 43 9 chr17 60088155 60088270 -29416283 + MIR3 SINE MIR 81 199 -9 1886 131 0 11 chr17 60088317 60088591 -29415962 + AluSx SINE Alu 1 271 -41 233 308 58 42 chr17 60088915 60089035 -29415518 - MER5A DNA MER1_type 0 189 68 2369 93 0 6 chr17 60089186 60089499 -29415054 + AluSx SINE Alu 1 311 -1 284 250 97 32 chr17 60091233 60091357 -29413196 + L1ME4a LINE L1 5990 6121 0 528 251 82 43 chr17 60091480 60091931 -29412622 + MLT1J LTR MaLR 3 501 -10 487 296 19 6 chr17 60092597 60092759 -29411794 - L2 LINE L2 -33 3280 3117 199 211 18 0 chr17 60092859 60092916 -29411637 + L2 LINE L2 2460 2517 -797 285 276 219 26 chr17 60092990 60093182 -29411371 + L2 LINE L2 2527 2755 -559 1031 249 165 37 chr17 60093182 60093587 -29410966 + MLT1J LTR MaLR 1 457 -54 451 312 37 6 chr17 60093600 60093844 -29410709 + MLT1J LTR MaLR 164 459 -52 203 365 32 19 chr17 60094581 60094737 -29409816 - MIR SINE MIR -49 213 56 192 192 346 26 chr17 60094852 60094930 -29409623 + MIR SINE MIR 34 136 -72 2369 84 0 7 chr17 60095123 60095420 -29409133 - AluY SINE Alu -14 297 3 489 328 55 77 chr17 60095423 60095719 -29408834 - L2 LINE L2 -7 3265 2979 2281 155 18 65 chr17 60095719 60096165 -29408388 + MSTB LTR MaLR 2 426 0 489 328 55 77 chr17 60096165 60096271 -29408282 - L2 LINE L2 -293 2979 2872 442 290 12 18 chr17 60096430 60096599 -29407954 - L1ME3A LINE L1 -9 6161 5994 625 200 8 0 chr17 60096651 60096776 -29407777 + L1MA10 LINE L1 6198 6323 -11 1313 181 62 18 chr17 60096998 60097274 -29407279 - MER63B DNA MER1_type -146 290 3 277 250 0 50 chr17 60097336 60097416 -29407137 - L1ME3A LINE L1 -262 5908 5833 201 132 0 0 chr17 60098262 60098300 -29406253 + (GA)n Simple_repeat Simple_repeat 1 38 0 1934 136 13 16 chr17 60098413 60098722 -29405831 - AluJb SINE Alu -4 308 1 1494 205 69 60 chr17 60098883 60099331 -29405222 + MLT1C LTR MaLR 11 462 -5 320 318 54 8 chr17 60099336 60099465 -29405088 + MER5A DNA MER1_type 55 189 0 2237 114 0 6 chr17 60099563 60099878 -29404675 + AluSp SINE Alu 1 313 0 232 320 169 14 chr17 60100414 60100633 -29403920 - L2 LINE L2 -14 3258 3006 741 271 44 32 chr17 60100694 60100945 -29403608 - MIR SINE MIR -6 256 3 391 252 47 9 chr17 60100945 60101042 -29403511 + MIR SINE MIR 46 146 -116 1736 153 8 4 chr17 60101230 60101492 -29403061 - AluSx SINE Alu -49 263 1 330 248 108 47 chr17 60101728 60101857 -29402696 + MIR SINE MIR 126 262 0 181 225 12 75 chr17 60102169 60102249 -29402304 + L2 LINE L2 3213 3287 -26 24 0 0 0 chr17 60103353 60103377 -29401176 + AT_rich Low_complexity Low_complexity 1 24 0 1819 22 4 13 chr17 60103697 60103924 -29400629 - L1PA4 LINE L1 -2 6153 5929 345 233 188 45 chr17 60104128 60104304 -29400249 - MIR SINE MIR -11 251 51 484 283 26 31 chr17 60104361 60104552 -29400001 + MIR SINE MIR 16 205 -57 2523 236 58 28 chr17 60106187 60106247 -29398306 + L1ME2 LINE L1 4832 4889 -1275 1910 85 3 123 chr17 60106247 60106589 -29397964 + AluSp SINE Alu 1 301 -2 2523 236 58 28 chr17 60106589 60107639 -29396914 + L1ME2 LINE L1 4889 5960 -204 547 167 117 17 chr17 60107664 60107784 -29396769 + MLT1H LTR MaLR 404 535 -14 27 56 0 0 chr17 60108779 60108815 -29395738 + AT_rich Low_complexity Low_complexity 1 36 0 197 353 111 33 chr17 60108847 60109091 -29395462 + L2 LINE L2 3005 3267 -5 703 183 7 7 chr17 60110129 60110271 -29394282 - MER5B DNA MER1_type -7 171 30 27 102 0 0 chr17 60110443 60110502 -29394051 + GC_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr17 60110871 60110895 -29393658 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 60111288 60111311 -29393242 + GC_rich Low_complexity Low_complexity 1 23 0 555 284 5 42 chr17 60113833 60114023 -29390530 - MER5A DNA MER1_type 0 189 7 374 252 87 8 chr17 60115165 60115292 -29389261 + MIR SINE MIR 70 206 -56 817 197 61 52 chr17 60116243 60116282 -29388271 - MER20 DNA MER1_type -4 215 178 2378 28 63 3 chr17 60116282 60116568 -29387985 - AluY SINE Alu -8 303 1 817 197 61 52 chr17 60116568 60116741 -29387812 - MER20 DNA MER1_type -41 178 1 1920 104 0 25 chr17 60117139 60117454 -29387099 - AluSx SINE Alu 0 321 14 460 319 11 16 chr17 60118767 60118949 -29385604 + MIR SINE MIR 12 192 -70 777 253 16 43 chr17 60120236 60120489 -29384064 + MIR SINE MIR 2 247 -15 191 262 0 0 chr17 60120457 60120499 -29384054 + L2 LINE L2 3261 3302 -11 * 1775 162 0 19 chr17 60120766 60121075 -29383478 - AluJb SINE Alu -8 304 2 1559 153 4 34 chr17 60121547 60121815 -29382738 + AluJo SINE Alu 33 292 -20 246 300 118 27 chr17 60122213 60122515 -29382038 - L2 LINE L2 -226 3046 2718 314 136 0 17 chr17 60122946 60123005 -29381548 + (TG)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr17 60124867 60124889 -29379664 + AT_rich Low_complexity Low_complexity 1 22 0 674 169 0 32 chr17 60125180 60125304 -29379249 + FLAM_C SINE Alu 1 120 -23 32 49 0 0 chr17 60125304 60125345 -29379208 + AT_rich Low_complexity Low_complexity 1 41 0 379 311 49 0 chr17 60125717 60125839 -29378714 + MIR SINE MIR 105 232 -30 2181 99 3 16 chr17 60126980 60127292 -29377261 + AluSq SINE Alu 1 308 -5 213 302 151 0 chr17 60127783 60127869 -29376684 + MIR SINE MIR 91 189 -73 280 269 65 28 chr17 60128069 60128177 -29376376 + MIR SINE MIR 34 145 -63 320 296 30 30 chr17 60128328 60128460 -29376093 + MIR SINE MIR 21 152 -56 475 179 93 36 chr17 60129052 60129192 -29375361 + MER117 DNA MER1_type 12 159 -38 241 250 14 28 chr17 60133638 60133710 -29370843 + L2 LINE L2 3242 3312 -1 2333 115 0 0 chr17 60133939 60134251 -29370302 - AluSx SINE Alu 0 312 1 1867 135 30 23 chr17 60134284 60134588 -29369965 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 60134837 60134858 -29369695 + AT_rich Low_complexity Low_complexity 1 21 0 559 107 6 12 chr17 60135960 60136060 -29368493 + L1MA4 LINE L1 5545 5646 -523 15506 130 18 8 chr17 60136060 60138454 -29366099 + Tigger1 DNA MER2_type 1 2417 -1 3582 122 49 16 chr17 60138455 60139064 -29365489 + L1MA4 LINE L1 5645 6273 -27 533 257 37 73 chr17 60139317 60139562 -29364991 - MIR SINE MIR -1 261 26 228 226 0 0 chr17 60142068 60142121 -29362432 + MER5B DNA MER1_type 1 53 -125 324 254 280 30 chr17 60142345 60142581 -29361972 - L1MC4a LINE L1 -256 5910 5616 240 200 0 92 chr17 60142593 60142658 -29361895 - L1P4 LINE L1 -588 5573 5515 23 0 0 0 chr17 60142663 60142686 -29361867 + AT_rich Low_complexity Low_complexity 1 23 0 300 296 46 9 chr17 60142690 60142798 -29361755 - MER5B DNA MER1_type -61 117 6 2320 109 0 16 chr17 60143579 60143891 -29360662 - AluSx SINE Alu -5 307 1 927 152 12 43 chr17 60145498 60145662 -29358891 - AluJo SINE Alu -80 232 74 1623 163 10 34 chr17 60145686 60145981 -29358572 - AluJo SINE Alu -9 303 16 512 328 137 11 chr17 60146124 60146585 -29357968 + L2 LINE L2 2040 2558 -756 192 351 72 40 chr17 60146766 60146988 -29357565 + L2 LINE L2 2831 3059 -213 215 196 20 0 chr17 60147162 60147213 -29357340 + L2 LINE L2 3262 3313 0 194 256 167 22 chr17 60147619 60147709 -29356844 - L2 LINE L2 -606 2708 2606 188 280 0 65 chr17 60147777 60147870 -29356683 - MIR3 SINE MIR -7 201 115 513 213 84 41 chr17 60149358 60149571 -29354982 - LTR45B LTR ERV1 0 489 304 221 266 80 44 chr17 60150678 60150791 -29353762 - MIR SINE MIR -96 166 50 228 289 31 75 chr17 60151435 60151594 -29352959 + MIR SINE MIR 20 171 -91 216 300 0 22 chr17 60151841 60151931 -29352622 + MIR SINE MIR 110 197 -65 846 216 7 0 chr17 60151968 60152121 -29352432 + FRAM SINE Alu 2 155 -21 408 88 0 0 chr17 60152431 60152488 -29352065 + (TG)n Simple_repeat Simple_repeat 1 57 0 464 304 12 0 chr17 60152620 60152788 -29351765 + CT-rich Low_complexity Low_complexity 4 173 0 2126 118 16 10 chr17 60153041 60153220 -29351333 - AluSx SINE Alu -6 306 123 180 0 0 0 chr17 60153220 60153240 -29351313 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2126 118 16 10 chr17 60153240 60153364 -29351189 - AluSx SINE Alu -189 123 1 233 169 15 31 chr17 60153427 60153492 -29351061 - L1ME4a LINE L1 0 6121 6058 369 316 105 27 chr17 60153600 60154169 -29350384 - L2 LINE L2 -54 3259 2578 334 286 86 7 chr17 60154248 60154388 -29350165 - MIR SINE MIR -12 250 100 1183 219 96 36 chr17 60154718 60155051 -29349502 - MLT1H LTR MaLR -147 402 50 295 299 64 70 chr17 60156249 60156979 -29347574 + L1ME LINE L1 3866 4591 -1555 248 221 105 0 chr17 60157069 60157164 -29347389 + L1P5 LINE L1 5328 5432 -722 312 15 0 215 chr17 60157171 60157236 -29347317 + AluSq/x SINE Alu 82 132 -171 1372 93 0 39 chr17 60157244 60157448 -29347105 + AluY SINE Alu 110 305 -6 269 253 6 135 chr17 60157504 60157598 -29346955 + L1ME LINE L1 5512 5576 -545 4079 144 17 9 chr17 60157598 60158287 -29346266 - L1PA16 LINE L1 -14 6152 5458 269 253 6 135 chr17 60158287 60158362 -29346191 + L1ME LINE L1 5576 5659 -462 321 26 0 0 chr17 60159282 60159320 -29345233 + (TG)n Simple_repeat Simple_repeat 2 39 0 232 286 75 31 chr17 60162491 60162652 -29341901 - MIR3 SINE MIR -7 201 34 1248 236 0 0 chr17 60162918 60163219 -29341334 - AluY SINE Alu -10 301 1 257 269 81 31 chr17 60163693 60163853 -29340700 - MIR3 SINE MIR -7 201 34 2402 79 0 7 chr17 60164119 60164422 -29340131 - AluY SINE Alu -10 301 1 300 303 21 70 chr17 60165094 60165236 -29339317 - L2 LINE L2 0 3272 3138 23 33 0 0 chr17 60166884 60166914 -29337639 + AT_rich Low_complexity Low_complexity 1 30 0 665 238 94 35 chr17 60167180 60167466 -29337087 - L1ME4a LINE L1 -1988 5820 5518 291 237 26 0 chr17 60168191 60168267 -29336286 + (TG)n Simple_repeat Simple_repeat 2 79 0 357 82 0 0 chr17 60171988 60172037 -29332516 + (TG)n Simple_repeat Simple_repeat 1 49 0 568 278 58 5 chr17 60172381 60172586 -29331967 - MIR SINE MIR 0 262 47 302 199 6 20 chr17 60172692 60172781 -29331772 - MER5A DNA MER1_type -76 113 15 225 0 0 0 chr17 60172937 60172962 -29331591 + (T)n Simple_repeat Simple_repeat 1 25 0 229 245 29 29 chr17 60173033 60173135 -29331418 + MER5B DNA MER1_type 1 102 -76 259 287 156 8 chr17 60173173 60173295 -29331258 + MIR SINE MIR 48 187 -75 2145 107 7 10 chr17 60173660 60173960 -29330593 - AluSc SINE Alu -10 299 1 383 200 94 0 chr17 60174579 60174664 -29329889 - MIR SINE MIR -70 192 100 573 272 32 28 chr17 60174712 60174929 -29329624 + MLT1J2 LTR MaLR 2 222 -228 2598 162 13 34 chr17 60174969 60175438 -29329115 + LTR32 LTR ERVL 13 471 0 230 267 93 0 chr17 60175452 60175527 -29329026 + MLT1I LTR MaLR 311 392 -17 2480 121 11 14 chr17 60175800 60176165 -29328388 - THE1B LTR MaLR 0 364 1 1355 253 73 20 chr17 60176322 60176922 -29327631 - Charlie2 DNA MER1_type 0 2862 2231 789 285 12 88 chr17 60176946 60177286 -29327267 - Charlie2 DNA MER1_type -2525 337 24 216 296 278 17 chr17 60177720 60177896 -29326657 - L2 LINE L2 -457 2857 2636 241 274 38 51 chr17 60178034 60178191 -29326362 + MER5B DNA MER1_type 4 158 -20 188 301 37 56 chr17 60178229 60178366 -29326187 - MIR SINE MIR -62 146 15 420 167 52 138 chr17 60178549 60178723 -29325830 + MER5B DNA MER1_type 2 160 -18 494 279 156 0 chr17 60178741 60178895 -29325658 + MER5A DNA MER1_type 6 183 -6 2041 149 0 3 chr17 60178915 60179223 -29325330 + AluSq SINE Alu 5 311 -2 1270 110 0 0 chr17 60179223 60179386 -29325167 + AluSq SINE Alu 134 296 -17 180 0 0 0 chr17 60179391 60179411 -29325142 + (CAA)n Simple_repeat Simple_repeat 2 21 0 264 111 0 0 chr17 60179634 60179670 -29324883 - MER50-int LTR ERV1 -7163 42 7 1019 115 32 0 chr17 60179670 60179826 -29324727 - MER50 LTR ERV1 -12 722 562 969 79 0 8 chr17 60179827 60179953 -29324600 + AluSp/q SINE Alu 175 299 -14 3469 134 5 36 chr17 60179961 60180550 -29324003 - MER50 LTR ERV1 -163 571 1 184 246 0 101 chr17 60180792 60180861 -29323692 + MIR SINE MIR 17 78 -184 462 218 6 11 chr17 60182829 60183003 -29321550 + CT-rich Low_complexity Low_complexity 2 174 0 239 214 20 20 chr17 60183018 60183116 -29321437 + CT-rich Low_complexity Low_complexity 2 99 0 310 280 8 76 chr17 60183398 60183530 -29321023 - MIR3 SINE MIR -7 201 79 373 223 78 117 chr17 60184768 60184888 -29319665 + MER97c DNA MER1_type? 816 939 -151 1019 153 35 35 chr17 60184888 60184931 -29319622 - L1PA16 LINE L1 -9 6157 6115 2225 110 53 37 chr17 60184931 60185286 -29319267 - THE1B LTR MaLR 0 364 4 1019 153 35 35 chr17 60185286 60185444 -29319109 - L1PA16 LINE L1 -50 6116 5956 373 223 78 117 chr17 60185444 60185605 -29318948 + MER97c DNA MER1_type? 939 1086 -4 837 193 6 55 chr17 60185843 60186024 -29318529 - MER20 DNA MER1_type -2 217 46 193 225 15 31 chr17 60186101 60186168 -29318385 + MIR SINE MIR 86 145 -63 208 259 0 19 chr17 60187510 60187564 -29316989 + CT-rich Low_complexity Low_complexity 1 53 0 1929 138 0 28 chr17 60188414 60188734 -29315819 - AluSx SINE Alu -1 311 1 634 76 0 0 chr17 60188922 60189001 -29315552 - MADE1 DNA Mariner 0 80 2 2439 57 0 14 chr17 60189373 60189669 -29314884 + AluY SINE Alu 1 292 -19 638 281 102 63 chr17 60189868 60190458 -29314095 - L2 LINE L2 -141 3172 2560 1990 151 20 0 chr17 60191358 60191657 -29312896 + AluSx SINE Alu 1 305 -7 283 301 38 30 chr17 60191786 60191919 -29312634 - MIR3 SINE MIR -67 141 8 220 186 12 128 chr17 60192525 60192611 -29311942 - MIR SINE MIR -77 185 110 1865 204 47 40 chr17 60192922 60193374 -29311179 + MLT1C LTR MaLR 6 460 -7 2326 105 0 3 chr17 60193381 60193694 -29310859 + AluSx SINE Alu 1 312 0 309 28 0 0 chr17 60193717 60193753 -29310800 + MADE1 DNA Mariner 1 36 -44 278 252 46 80 chr17 60193856 60194007 -29310546 + L2 LINE L2 2950 3095 -177 374 267 87 56 chr17 60194387 60194548 -29310005 + MIR3 SINE MIR 28 193 -15 306 314 9 37 chr17 60195634 60195764 -29308789 - MIR SINE MIR -63 145 20 816 308 21 8 chr17 60195770 60196010 -29308543 - MIR SINE MIR -1 261 19 303 308 33 0 chr17 60196433 60196524 -29308029 - MIR SINE MIR -80 182 89 1269 185 9 5 chr17 60197505 60197756 -29306797 + AluSg/x SINE Alu 67 318 0 286 308 122 14 chr17 60197839 60198053 -29306500 + L3 LINE CR1 745 981 -596 7180 213 46 35 chr17 60198055 60199280 -29305273 + L1M4c LINE L1 16 1252 -5394 1813 163 3 19 chr17 60199280 60199593 -29304960 + AluJo SINE Alu 1 308 -4 7180 213 46 35 chr17 60199593 60200168 -29304385 + L1M4c LINE L1 1252 1820 -4826 903 207 27 70 chr17 60200202 60200458 -29304095 + AluJo SINE Alu 56 300 -12 1637 230 42 61 chr17 60200459 60201312 -29303241 + L1M4c LINE L1 2027 2762 -3884 255 195 0 0 chr17 60201316 60201357 -29303196 - Alu SINE Alu -256 43 3 190 285 150 82 chr17 60201395 60201602 -29302951 + L3 LINE CR1 1254 1474 -103 301 254 42 63 chr17 60202090 60202232 -29302321 + MIR SINE MIR 82 220 -42 203 256 0 0 chr17 60202263 60202306 -29302247 + L2 LINE L2 3262 3304 -9 200 270 22 112 chr17 60202513 60202602 -29301951 + MIR SINE MIR 20 100 -162 217 100 0 0 chr17 60202604 60202634 -29301919 + (TG)n Simple_repeat Simple_repeat 1 30 0 1739 155 7 14 chr17 60203445 60203753 -29300800 + AluSx SINE Alu 1 306 0 335 295 212 37 chr17 60204392 60204609 -29299944 - MIR SINE MIR -1 261 7 2755 282 67 39 chr17 60204659 60205632 -29298921 + L1M4b LINE L1 11 1253 -5606 303 182 26 104 chr17 60205783 60205860 -29298693 + L1M4b LINE L1 1154 1224 -5635 1816 125 3 51 chr17 60206096 60206409 -29298144 + AluSx SINE Alu 11 308 -4 2329 222 97 25 chr17 60206423 60206743 -29297810 + L1M4b LINE L1 1190 1485 -5474 7972 115 9 58 chr17 60206743 60207314 -29297239 - HSMAR2 DNA Mariner -1 1301 704 2117 138 0 10 chr17 60207314 60207626 -29296927 - AluSx SINE Alu -3 309 1 7972 115 9 58 chr17 60207626 60208421 -29296132 - HSMAR2 DNA Mariner -598 704 2 2329 222 97 25 chr17 60208421 60208470 -29296083 + L1M4b LINE L1 1485 1529 -5430 276 30 0 0 chr17 60208470 60208503 -29296050 + (CA)n Simple_repeat Simple_repeat 2 34 0 2329 222 97 25 chr17 60208503 60209061 -29295492 + L1M4b LINE L1 1529 2188 -4771 3207 171 24 11 chr17 60209061 60209681 -29294872 + L1MB8 LINE L1 5545 6172 -6 278 332 123 5 chr17 60210107 60210294 -29294259 - L2 LINE L2 -1013 2301 2093 1406 271 49 28 chr17 60210298 60210771 -29293782 - LTR33 LTR ERVL -10 511 29 270 136 0 0 chr17 60210774 60210818 -29293735 + (CA)n Simple_repeat Simple_repeat 2 45 0 2068 150 16 3 chr17 60210886 60211200 -29293353 - MLT2B2 LTR ERVL -197 318 1 391 319 166 59 chr17 60211212 60211409 -29293144 - L2 LINE L2 -2029 1285 1110 2182 136 0 0 chr17 60211409 60211717 -29292836 + AluSx SINE Alu 1 308 -4 391 319 166 59 chr17 60211717 60212326 -29292227 - L2 LINE L2 -2204 1110 359 1830 183 19 50 chr17 60212326 60212627 -29291926 - MLT1A1 LTR MaLR 0 365 77 1889 159 0 13 chr17 60212627 60212936 -29291617 + AluSg SINE Alu 1 305 -5 1830 183 19 50 chr17 60212936 60213011 -29291542 - MLT1A1 LTR MaLR -288 77 1 391 319 166 59 chr17 60213011 60213157 -29291396 - L2 LINE L2 -2955 359 230 23 68 0 0 chr17 60214023 60214067 -29290486 + AT_rich Low_complexity Low_complexity 1 44 0 283 259 118 37 chr17 60214355 60214490 -29290063 - MIR SINE MIR 0 262 117 504 310 114 28 chr17 60214763 60215115 -29289438 + L2 LINE L2 2130 2511 -803 571 251 23 34 chr17 60215127 60215302 -29289251 + MER5A DNA MER1_type 5 177 -12 243 392 18 12 chr17 60215351 60215522 -29289031 + L2 LINE L2 2586 2757 -557 1105 193 132 15 chr17 60215558 60215884 -29288669 - Charlie5 DNA MER1_type 0 2618 2255 764 145 0 8 chr17 60215885 60216002 -29288551 + FLAM_C SINE Alu 1 116 -17 425 127 14 0 chr17 60216009 60216080 -29288473 + AluJ/FRAM SINE Alu 232 303 -9 447 143 79 103 chr17 60216104 60216166 -29288387 - Charlie5 DNA MER1_type -2497 127 68 1632 63 0 0 chr17 60216166 60216373 -29288180 - L1PA5 LINE L1 0 6154 5948 447 143 79 103 chr17 60216373 60216436 -29288117 - Charlie5 DNA MER1_type -2556 68 5 22 65 0 0 chr17 60216686 60216717 -29287836 + AT_rich Low_complexity Low_complexity 1 31 0 2368 82 0 16 chr17 60216845 60217160 -29287393 + AluY SINE Alu 2 311 0 361 225 14 0 chr17 60217303 60217374 -29287179 + L2 LINE L2 3242 3313 0 298 248 69 20 chr17 60217605 60217706 -29286847 + MIR SINE MIR 41 146 -62 2264 139 11 27 chr17 60219059 60219290 -29285263 + THE1B LTR MaLR 2 235 -129 2411 102 19 43 chr17 60219290 60219468 -29285085 + THE1B LTR MaLR 1 182 -182 2554 64 0 0 chr17 60219468 60219763 -29284790 + AluY SINE Alu 1 295 -16 2411 102 19 43 chr17 60219763 60219957 -29284596 + THE1B LTR MaLR 182 364 0 11904 94 5 1 chr17 60219957 60221530 -29283023 + THE1B-int LTR MaLR 1 1580 0 2458 111 25 14 chr17 60221530 60221890 -29282663 + THE1B LTR MaLR 1 364 0 2264 139 11 27 chr17 60221890 60222024 -29282529 + THE1B LTR MaLR 232 363 -1 2139 114 16 10 chr17 60222024 60222331 -29282222 + AluSg1 SINE Alu 1 309 0 212 265 68 51 chr17 60222725 60222842 -29281711 - MIR SINE MIR -64 144 26 3124 141 134 112 chr17 60222891 60223086 -29281467 + L1MC3 LINE L1 6898 7087 -698 292 284 0 0 chr17 60223086 60223160 -29281393 + MLT1F1 LTR MaLR 35 108 -459 3124 141 134 112 chr17 60223160 60223389 -29281164 + L1MC3 LINE L1 7087 7309 -476 2376 107 36 33 chr17 60223389 60223752 -29280801 - THE1B LTR MaLR 0 364 1 3124 141 134 112 chr17 60223752 60224113 -29280440 + L1MC3 LINE L1 7309 7776 -9 1745 179 17 0 chr17 60224117 60224418 -29280135 + AluJo SINE Alu 1 306 -6 1041 204 0 0 chr17 60224420 60224592 -29279961 + FAM SINE Alu 1 172 -3 21 0 0 0 chr17 60224592 60224613 -29279940 + AT_rich Low_complexity Low_complexity 1 21 0 224 303 91 10 chr17 60225041 60225140 -29279413 + MIR SINE MIR 102 208 -54 500 306 70 25 chr17 60225433 60225675 -29278878 - MLT1L LTR MaLR 0 615 363 257 281 39 79 chr17 60225755 60225958 -29278595 + L2 LINE L2 3050 3244 -69 1843 139 0 31 chr17 60226137 60226431 -29278122 + AluJo SINE Alu 11 295 -17 201 365 87 0 chr17 60226831 60226957 -29277596 - MIR SINE MIR -65 197 61 251 345 9 9 chr17 60227525 60227641 -29276912 + MIR SINE MIR 44 159 -103 268 379 82 25 chr17 60228380 60228623 -29275930 - L2 LINE L2 0 3272 3016 1050 117 11 53 chr17 60228638 60229007 -29275546 - AluSg/x SINE Alu 0 310 131 359 327 126 52 chr17 60229037 60229702 -29274851 - L2 LINE L2 -339 2975 2214 987 185 0 0 chr17 60229702 60229859 -29274694 + FRAM SINE Alu 1 157 -9 359 327 126 52 chr17 60229859 60230166 -29274387 - L2 LINE L2 -1100 2214 1931 270 267 111 15 chr17 60230378 60230513 -29274040 - MIR SINE MIR -17 245 98 2627 58 0 3 chr17 60230732 60231044 -29273509 - AluY SINE Alu 0 311 1 2498 203 40 68 chr17 60231191 60231910 -29272643 + LTR34 LTR ERV1 1 699 0 1611 187 155 17 chr17 60232195 60232602 -29271951 - MER31B LTR ERV1 -3 463 1 879 271 72 34 chr17 60232605 60233047 -29271506 + L2 LINE L2 2830 3288 -25 2281 116 0 0 chr17 60233146 60233449 -29271104 + AluSg SINE Alu 1 303 -7 2836 109 34 0 chr17 60233655 60234068 -29270485 + MSTA LTR MaLR 1 427 -1 258 240 80 13 chr17 60234499 60234574 -29269979 + L2 LINE L2 3162 3241 -31 326 247 0 35 chr17 60235116 60235201 -29269352 + L2 LINE L2 3229 3310 -3 2176 121 10 0 chr17 60235534 60235840 -29268713 + AluSx SINE Alu 1 309 -3 223 305 85 24 chr17 60236109 60236273 -29268280 - MIR SINE MIR -13 249 76 586 208 135 10 chr17 60237105 60237297 -29267256 + MIR SINE MIR 47 262 0 273 249 95 84 chr17 60237310 60237491 -29267062 + L1ME4a LINE L1 5661 5847 -274 2370 92 0 13 chr17 60237491 60237796 -29266757 - AluSg SINE Alu -9 301 1 273 249 95 84 chr17 60237796 60237887 -29266666 + L1ME4a LINE L1 5847 5936 -185 28 48 0 0 chr17 60237990 60238032 -29266521 + AT_rich Low_complexity Low_complexity 1 42 0 321 254 72 92 chr17 60238475 60238822 -29265731 - L2 LINE L2 -5 3267 2928 24 0 0 0 chr17 60240254 60240278 -29264275 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 60241348 60241369 -29263184 + AT_rich Low_complexity Low_complexity 1 21 0 384 256 11 0 chr17 60243468 60243558 -29260995 - MIR3 SINE MIR -46 162 72 603 124 67 0 chr17 60243754 60243859 -29260694 - MIR SINE MIR -28 234 123 1076 206 35 112 chr17 60243859 60244149 -29260404 - L1MEc LINE L1 -4080 2316 2072 2342 85 3 3 chr17 60244149 60244444 -29260109 - AluSg SINE Alu -15 295 1 1076 206 35 112 chr17 60244444 60244609 -29259944 - L1MEc LINE L1 -4324 2072 1896 1775 112 4 0 chr17 60244689 60244950 -29259603 - AluSx SINE Alu 0 302 41 1902 109 6 68 chr17 60245012 60245369 -29259184 - AluSq SINE Alu 0 313 3 952 322 84 52 chr17 60245372 60246864 -29257689 - L1MEc LINE L1 -4817 1579 40 308 312 51 25 chr17 60247035 60247192 -29257361 + L2 LINE L2 2879 3039 -233 2100 134 3 3 chr17 60247791 60248096 -29256457 + AluSx SINE Alu 1 305 -7 996 151 38 0 chr17 60248688 60248847 -29255706 - AluJb SINE Alu -14 298 134 2452 58 13 13 chr17 60249318 60249629 -29254924 + AluY SINE Alu 1 311 0 237 345 60 17 chr17 60249963 60250079 -29254474 + L2 LINE L2 3149 3269 -3 2338 101 0 0 chr17 60251582 60251878 -29252675 + AluSx SINE Alu 1 296 -16 2248 113 0 0 chr17 60252292 60252592 -29251961 + AluSx SINE Alu 4 303 -9 2284 104 0 22 chr17 60252595 60252913 -29251640 + AluSp SINE Alu 1 311 -2 32 57 0 0 chr17 60253048 60253101 -29251452 + AT_rich Low_complexity Low_complexity 1 53 0 2057 142 3 0 chr17 60253622 60253924 -29250629 + AluSx SINE Alu 1 303 -9 986 117 7 52 chr17 60253924 60254105 -29250448 + AluSg/x SINE Alu 135 308 0 845 129 7 43 chr17 60254108 60254248 -29250305 + AluSq/x SINE Alu 1 135 -178 1537 167 10 42 chr17 60254248 60254554 -29249999 + AluSx SINE Alu 1 296 -16 1951 92 0 0 chr17 60254556 60254796 -29249757 + AluSx SINE Alu 1 240 -72 450 0 0 0 chr17 60254809 60254859 -29249694 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2047 139 0 0 chr17 60256230 60256524 -29248029 + AluSx SINE Alu 3 296 -16 326 122 0 0 chr17 60256524 60256573 -29247980 + L1MA3 LINE L1 6257 6305 0 322 259 66 60 chr17 60256707 60256873 -29247680 - MER5B DNA MER1_type 0 178 12 408 268 63 8 chr17 60256964 60257091 -29247462 + MIR SINE MIR 107 240 -22 569 264 77 13 chr17 60257563 60257750 -29246803 + MIR3 SINE MIR 4 201 -7 447 320 74 15 chr17 60258238 60258441 -29246112 - MIR SINE MIR -46 216 2 1735 188 0 0 chr17 60259304 60259592 -29244961 + AluJo SINE Alu 1 288 -24 329 284 144 24 chr17 60260840 60261048 -29243505 + L1ME4a LINE L1 5789 6021 -100 387 0 0 0 chr17 60262066 60262109 -29242444 + (CA)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr17 60263433 60263454 -29241099 + AT_rich Low_complexity Low_complexity 1 21 0 854 99 9 0 chr17 60264766 60264877 -29239676 + AluSx SINE Alu 60 171 -141 791 301 116 29 chr17 60264886 60265018 -29239535 + L2 LINE L2 2575 2694 -619 1750 164 10 35 chr17 60265018 60265330 -29239223 + AluJo SINE Alu 1 304 -8 791 301 116 29 chr17 60265330 60265880 -29238673 + L2 LINE L2 2694 3309 -4 579 233 145 26 chr17 60266543 60266771 -29237782 + MIR SINE MIR 8 262 0 22 0 0 0 chr17 60269252 60269274 -29235279 + GC_rich Low_complexity Low_complexity 1 22 0 222 217 58 14 chr17 60269326 60269395 -29235158 + (CCGGG)n Simple_repeat Simple_repeat 4 75 0 317 246 88 61 chr17 60269402 60269516 -29235037 + L1MDb LINE L1 609 725 -5684 213 194 48 0 chr17 60269818 60269880 -29234673 + (TTCA)n Simple_repeat Simple_repeat 3 67 0 189 111 56 28 chr17 60269966 60270002 -29234551 + L3 LINE CR1 1534 1570 -7 28 0 0 0 chr17 60270054 60270082 -29234471 + AT_rich Low_complexity Low_complexity 1 28 0 2196 106 0 0 chr17 60270188 60270470 -29234083 + AluSx SINE Alu 1 282 -30 272 257 165 28 chr17 60270737 60270846 -29233707 - MIR SINE MIR -50 212 89 653 162 125 15 chr17 60271169 60271305 -29233248 + L1MC1 LINE L1 6178 6328 -5 1065 216 0 14 chr17 60271321 60271534 -29233019 + AluJo SINE Alu 1 210 -102 1948 161 13 43 chr17 60271583 60271955 -29232598 + L1MB8 LINE L1 5816 6176 -2 218 284 63 53 chr17 60272005 60272100 -29232453 + L2 LINE L2 3209 3304 -9 2478 67 0 6 chr17 60273653 60273966 -29230587 - AluY SINE Alu 0 311 1 1442 86 5 0 chr17 60274080 60274266 -29230287 - L1PA8 LINE L1 0 6172 5986 518 301 115 14 chr17 60274266 60274475 -29230078 - MIR SINE MIR -13 249 20 1267 160 5 0 chr17 60275367 60275555 -29228998 + MER1B DNA MER1_type 1 189 -108 * 1468 117 9 24 chr17 60275548 60275761 -29228792 + MER1B DNA MER1_type 130 339 0 283 286 44 0 chr17 60275961 60276052 -29228501 + MLT1J LTR MaLR 403 497 -14 2169 123 0 7 chr17 60276106 60276415 -29228138 + AluSq SINE Alu 1 307 -6 2466 83 0 6 chr17 60276536 60276849 -29227704 - AluY SINE Alu 0 311 1 1867 167 0 3 chr17 60277336 60277629 -29226924 + AluJb SINE Alu 6 297 -15 2305 56 0 14 chr17 60277732 60278046 -29226507 + AluY SINE Alu 1 310 0 3474 189 21 14 chr17 60278154 60278810 -29225743 + MER67B LTR ERV1 1 661 0 283 231 62 0 chr17 60278854 60278919 -29225634 - MIR SINE MIR -110 152 84 306 299 35 0 chr17 60278939 60279026 -29225527 - MIR3 SINE MIR 0 208 119 619 145 152 21 chr17 60279087 60279232 -29225321 + MER53 DNA DNA 1 164 -25 828 171 0 0 chr17 60279233 60279356 -29225197 + AluJ SINE Alu 2 124 -188 627 85 15 39 chr17 60279358 60279488 -29225065 + (GGGGA)n Simple_repeat Simple_repeat 4 130 0 564 42 0 0 chr17 60279589 60279660 -29224893 + (GGGAA)n Simple_repeat Simple_repeat 5 75 0 1054 139 78 0 chr17 60279660 60279826 -29224727 + AluJ SINE Alu 134 312 0 180 182 0 0 chr17 60279826 60279870 -29224683 + (TA)n Simple_repeat Simple_repeat 1 44 0 1353 128 95 11 chr17 60280135 60280549 -29224004 - LTR54 LTR ERV1 0 510 1 242 339 34 42 chr17 60281224 60281342 -29223211 - MIR SINE MIR -63 145 29 512 231 152 99 chr17 60281768 60281878 -29222675 + MIR SINE MIR 7 110 -152 2194 132 0 0 chr17 60281878 60282189 -29222364 + AluSx SINE Alu 1 311 -1 512 231 152 99 chr17 60282189 60282321 -29222232 + MIR SINE MIR 110 262 0 2376 71 0 7 chr17 60283361 60283656 -29220897 + AluY SINE Alu 9 301 -10 509 266 121 6 chr17 60283815 60283988 -29220565 - MIR SINE MIR -25 237 45 265 200 50 0 chr17 60284386 60284446 -29220107 - L3 LINE CR1 -2 1575 1513 407 310 21 14 chr17 60284834 60284979 -29219574 - L3 LINE CR1 -93 1484 1339 191 241 13 101 chr17 60285085 60285164 -29219389 + L2 LINE L2 3197 3268 -4 582 208 5 158 chr17 60285477 60285536 -29219017 + MER5B DNA MER1_type 7 73 -105 6427 55 1 0 chr17 60285536 60286277 -29218276 + L1PA6 LINE L1 5412 6153 -1 582 208 5 158 chr17 60286277 60286320 -29218233 + MER5B DNA MER1_type 73 121 -57 2380 92 3 0 chr17 60286320 60286625 -29217928 + AluY SINE Alu 1 306 -5 582 208 5 158 chr17 60286625 60286723 -29217830 + MER5B DNA MER1_type 121 177 -1 419 299 204 0 chr17 60286746 60286893 -29217660 + MER5A DNA MER1_type 10 186 -3 1065 211 5 0 chr17 60286916 60287101 -29217452 + MER58A DNA MER1_type 1 186 -38 1061 236 63 11 chr17 60287101 60287372 -29217181 + MER34 LTR ERV1 1 285 -257 2522 60 0 22 chr17 60287426 60287744 -29216809 - AluY SINE Alu 0 311 1 685 229 36 0 chr17 60287755 60287895 -29216658 + MER34 LTR ERV1 393 537 -5 291 111 44 0 chr17 60287896 60287941 -29216612 + MER58A DNA MER1_type 178 224 0 387 0 0 0 chr17 60288424 60288467 -29216086 + (TTTTG)n Simple_repeat Simple_repeat 5 47 0 2136 114 0 0 chr17 60288467 60288747 -29215806 - AluSx SINE Alu -32 280 1 404 284 97 13 chr17 60288996 60289151 -29215402 - MER5A DNA MER1_type 0 189 22 1141 215 9 5 chr17 60289173 60289387 -29215166 + MER58A DNA MER1_type 1 215 -9 299 262 70 76 chr17 60289389 60289561 -29214992 + MER5A DNA MER1_type 1 171 -18 799 83 18 9 chr17 60289648 60289757 -29214796 - FRAM SINE Alu -6 170 61 31 0 0 0 chr17 60289769 60289800 -29214753 + AT_rich Low_complexity Low_complexity 1 31 0 393 60 0 0 chr17 60289801 60289851 -29214702 - MER66B LTR ERV1 -142 344 295 1129 231 40 80 chr17 60290023 60290421 -29214132 - LTR16A LTR ERVL -50 400 19 551 283 25 6 chr17 60290499 60290658 -29213895 - MIR SINE MIR -70 192 31 490 255 50 7 chr17 60290750 60290891 -29213662 + MER103 DNA DNA 10 156 -10 337 182 29 17 chr17 60291789 60291808 -29212745 - MER51A LTR ERV1 -562 78 61 4544 108 8 6 chr17 60291808 60292447 -29212106 - MER51C LTR ERV1 0 640 1 337 182 29 17 chr17 60292447 60292522 -29212031 - MER51A LTR ERV1 -579 61 1 207 317 108 8 chr17 60293058 60293178 -29211375 - MIR3 SINE MIR -11 197 66 2267 113 3 3 chr17 60293529 60293830 -29210723 + AluSx SINE Alu 1 301 -11 432 228 148 19 chr17 60293937 60294099 -29210454 + MIR SINE MIR 80 262 0 290 293 155 28 chr17 60294846 60294924 -29209629 + MIR SINE MIR 49 116 -146 2760 129 8 42 chr17 60294924 60294972 -29209581 - L1MB4 LINE L1 -2 6178 6130 2535 54 0 3 chr17 60294972 60295270 -29209283 - AluY SINE Alu -14 297 1 2760 129 8 42 chr17 60295270 60295701 -29208852 - L1MB4 LINE L1 -50 6130 5715 290 293 155 28 chr17 60295701 60295803 -29208750 + MIR SINE MIR 116 252 -10 183 162 0 27 chr17 60295771 60295808 -29208745 + L2 LINE L2 3225 3260 -12 * 2407 56 0 3 chr17 60295827 60296154 -29208399 - AluY SINE Alu 0 326 1 204 321 69 50 chr17 60296720 60296879 -29207674 - MIR3 SINE MIR -14 194 33 1915 152 0 7 chr17 60296981 60297278 -29207275 - AluSx SINE Alu -17 295 1 1149 230 118 57 chr17 60297492 60297966 -29206587 + MLT1D LTR MaLR 1 503 -2 333 275 44 75 chr17 60298100 60298260 -29206293 - MIR3 SINE MIR -43 165 11 2384 92 0 0 chr17 60298473 60298766 -29205787 - AluSg SINE Alu -17 293 1 490 313 71 37 chr17 60298767 60299262 -29205291 + L2 LINE L2 2744 3272 0 1742 160 19 29 chr17 60299404 60299711 -29204842 + AluJo SINE Alu 9 312 0 1465 184 3 28 chr17 60300608 60300880 -29203673 + AluJo SINE Alu 1 267 -45 255 61 0 0 chr17 60300880 60300913 -29203640 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 697 196 31 6 chr17 60301127 60301290 -29203263 - L1ME3A LINE L1 0 6170 6004 278 156 0 0 chr17 60301299 60301344 -29203209 - L1ME3A LINE L1 -378 5792 5748 968 294 24 6 chr17 60302403 60302743 -29201810 - L1ME4a LINE L1 -256 5865 5520 1773 174 3 10 chr17 60303089 60303415 -29201138 + AluJb SINE Alu 1 312 0 2273 117 7 0 chr17 60303418 60303727 -29200826 + AluSq SINE Alu 2 312 -1 371 259 0 52 chr17 60303913 60304029 -29200524 + MIR3 SINE MIR 94 203 -5 2155 124 0 16 chr17 60304749 60305055 -29199498 + AluSc SINE Alu 1 301 -8 2360 94 7 0 chr17 60305098 60305406 -29199147 - AluSq SINE Alu -3 310 1 22 0 0 0 chr17 60305411 60305433 -29199120 + AT_rich Low_complexity Low_complexity 1 22 0 3392 126 62 103 chr17 60305986 60306795 -29197758 + LTR1 LTR ERV1 10 785 0 1572 179 30 7 chr17 60307300 60307597 -29196956 + AluJo SINE Alu 1 304 -8 2225 119 0 3 chr17 60307729 60308040 -29196513 + AluSg SINE Alu 1 310 0 2399 69 3 7 chr17 60308157 60308461 -29196092 + AluY SINE Alu 1 303 -8 993 180 46 0 chr17 60308890 60309084 -29195469 + L1ME1 LINE L1 5810 6012 -154 779 152 0 23 chr17 60309084 60309216 -29195337 + FRAM SINE Alu 48 176 0 223 71 89 36 chr17 60309846 60309902 -29194651 + MIR SINE MIR 97 155 -107 1709 185 18 0 chr17 60309911 60310219 -29194334 + AluJo SINE Alu 2 314 0 1243 133 82 9 chr17 60310687 60310853 -29193700 - Tigger7 DNA MER2_type -9 2478 2289 1614 166 25 14 chr17 60310853 60311136 -29193417 + AluJo SINE Alu 1 286 -26 1243 133 82 9 chr17 60311136 60311202 -29193351 - Tigger7 DNA MER2_type -198 2289 2229 1899 155 3 0 chr17 60311434 60311725 -29192828 + AluSx SINE Alu 20 311 -1 277 271 103 89 chr17 60311929 60312132 -29192421 + L3 LINE CR1 597 802 -775 516 307 102 23 chr17 60312516 60312780 -29191773 + L3 LINE CR1 862 1146 -431 585 271 51 0 chr17 60312788 60312965 -29191588 + MIR SINE MIR 1 186 -76 564 312 19 68 chr17 60312990 60313355 -29191198 + L3 LINE CR1 1184 1530 -47 2405 96 3 10 chr17 60313574 60313888 -29190665 + AluSq SINE Alu 1 312 -1 2418 71 0 0 chr17 60314982 60315277 -29189276 - AluY SINE Alu -16 295 1 1869 141 131 17 chr17 60315354 60315758 -29188795 + LTR7 LTR ERV1 1 450 0 1636 192 113 15 chr17 60315758 60316164 -29188389 + HERVH LTR ERV1 1 446 -7267 16145 188 8 34 chr17 60316252 60317279 -29187274 + HERVH LTR ERV1 801 1854 -5859 2081 132 0 16 chr17 60317279 60317583 -29186970 + AluSg SINE Alu 1 299 -11 16145 188 8 34 chr17 60317583 60319835 -29184718 + HERVH LTR ERV1 1854 3993 -3720 4901 228 18 34 chr17 60319867 60320172 -29184381 + HERVH LTR ERV1 3995 4304 -2787 2318 88 13 0 chr17 60320172 60320478 -29184075 + AluSg SINE Alu 1 310 0 4901 228 18 34 chr17 60320478 60321373 -29183180 + HERVH LTR ERV1 4304 5147 -1944 1702 186 113 33 chr17 60321390 60321815 -29182738 + LTR2B LTR ERV1 32 490 0 6654 73 9 1 chr17 60321815 60322662 -29181891 + Harlequin LTR ERV1 1 854 -6042 2572 164 11 0 chr17 60322680 60323130 -29181423 + HERVH LTR ERV1 5589 6043 -1670 * 3807 107 7 12 chr17 60323100 60323660 -29180893 + HERVH LTR ERV1 7157 7713 0 2322 143 51 14 chr17 60323660 60324094 -29180459 + LTR7 LTR ERV1 1 450 0 2102 124 10 3 chr17 60324149 60324448 -29180105 - AluSx SINE Alu -11 301 1 280 143 0 0 chr17 60324575 60324617 -29179936 - MLT1C LTR MaLR -4 463 422 951 176 13 0 chr17 60324630 60324789 -29179764 + FRAM SINE Alu 16 176 0 1579 208 40 47 chr17 60324790 60325218 -29179335 - MLT1C LTR MaLR -42 425 1 660 230 19 6 chr17 60325218 60325379 -29179174 + MIR SINE MIR 35 197 -65 239 321 0 0 chr17 60325488 60325544 -29179009 - LTR67 LTR ERVL -401 156 101 1022 199 70 5 chr17 60325578 60325764 -29178789 + AluJb SINE Alu 85 282 -30 1921 155 14 0 chr17 60325820 60326111 -29178442 - AluJb SINE Alu -17 295 1 2080 122 4 0 chr17 60326890 60327199 -29177354 + AluSx SINE Alu 7 316 0 323 330 93 10 chr17 60327212 60327406 -29177147 + MIR SINE MIR 3 212 -50 182 340 43 32 chr17 60328006 60328100 -29176453 - MER5A DNA MER1_type -56 133 39 * 253 234 45 28 chr17 60328024 60328108 -29176445 + MER5A DNA MER1_type 85 162 -16 492 116 0 0 chr17 60328622 60328708 -29175845 + (TC)n Simple_repeat Simple_repeat 1 86 0 21 0 0 0 chr17 60328972 60328993 -29175560 + AT_rich Low_complexity Low_complexity 1 21 0 1780 180 0 10 chr17 60329289 60329578 -29174975 - AluJb SINE Alu -26 286 1 267 303 0 40 chr17 60330132 60330231 -29174322 + L2 LINE L2 3176 3270 -2 241 307 45 0 chr17 60330645 60330733 -29173820 - MIR SINE MIR -111 151 60 2075 149 70 75 chr17 60330924 60331238 -29173315 + MLT2D LTR ERVL 1 314 -100 1556 144 96 15 chr17 60331238 60331509 -29173044 - AluSx SINE Alu -19 293 1 2075 149 70 75 chr17 60331509 60331610 -29172943 + MLT2D LTR ERVL 314 414 0 393 238 93 13 chr17 60331887 60332038 -29172515 + L1MC4 LINE L1 7094 7256 -786 300 299 23 0 chr17 60332299 60332386 -29172167 + MER94 DNA DNA 42 130 -4 419 268 160 39 chr17 60332394 60332857 -29171696 + L1MC5 LINE L1 7421 7939 -22 1635 185 10 20 chr17 60332867 60333169 -29171384 - AluJo SINE Alu -12 300 2 567 277 83 33 chr17 60333261 60333503 -29171050 - MIR SINE MIR -2 260 7 2171 109 3 16 chr17 60333605 60333918 -29170635 - AluSc SINE Alu 0 309 1 302 235 94 0 chr17 60334142 60334227 -29170326 - MER5A DNA MER1_type -93 96 4 278 369 60 0 chr17 60334509 60334658 -29169895 - L2 LINE L2 0 3272 3115 2086 61 0 4 chr17 60334680 60334943 -29169610 + L1PA6 LINE L1 5890 6151 -3 619 289 103 24 chr17 60336068 60336477 -29168076 - L1ME4a LINE L1 -168 5953 5513 297 0 0 0 chr17 60336479 60336512 -29168041 + (CAT)n Simple_repeat Simple_repeat 1 33 0 339 289 52 7 chr17 60336514 60336649 -29167904 - MIR SINE MIR -8 254 114 2077 128 9 37 chr17 60336677 60336958 -29167595 + AluSx SINE Alu 1 273 -39 216 0 0 0 chr17 60336958 60336982 -29167571 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2077 128 9 37 chr17 60336982 60337021 -29167532 + AluSx SINE Alu 273 312 0 436 248 51 51 chr17 60337148 60337305 -29167248 - L1MC4a LINE L1 -1886 5922 5766 2050 112 13 26 chr17 60337432 60337736 -29166817 - AluY SINE Alu -11 300 1 191 349 116 0 chr17 60337842 60337988 -29166565 + MIR3 SINE MIR 43 205 -3 582 200 181 14 chr17 60338336 60338546 -29166007 + L1ME4a LINE L1 5874 6118 -3 1825 155 44 20 chr17 60338554 60338851 -29165702 + AluJb SINE Alu 1 304 -8 498 279 75 53 chr17 60339046 60339311 -29165242 + MLT1J LTR MaLR 24 294 -217 2250 104 0 7 chr17 60339459 60339768 -29164785 + AluY SINE Alu 1 307 -4 2202 92 3 55 chr17 60339813 60340139 -29164414 - AluSc SINE Alu 0 309 1 2099 140 3 0 chr17 60341109 60341416 -29163137 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr17 60341975 60341996 -29162557 + AT_rich Low_complexity Low_complexity 1 21 0 279 275 18 36 chr17 60342176 60342263 -29162290 + (TATATG)n Simple_repeat Simple_repeat 2 86 -79 180 77 0 0 chr17 60342263 60342289 -29162264 + (CA)n Simple_repeat Simple_repeat 2 27 0 279 275 18 36 chr17 60342289 60342368 -29162185 + (TATATG)n Simple_repeat Simple_repeat 86 165 0 222 91 0 0 chr17 60342377 60342410 -29162143 + (CA)n Simple_repeat Simple_repeat 2 34 0 255 275 67 50 chr17 60342494 60342614 -29161939 + MIR SINE MIR 121 242 -20 * 377 271 54 31 chr17 60342591 60342720 -29161833 + L2 LINE L2 3182 3313 0 1297 155 52 69 chr17 60343089 60343379 -29161174 + AluJo SINE Alu 1 285 -27 232 287 20 40 chr17 60343398 60343499 -29161054 + L3b LINE CR1 1306 1404 -179 2270 87 3 3 chr17 60344835 60345146 -29159407 - AluSp SINE Alu 0 311 1 856 159 0 0 chr17 60345170 60345302 -29159251 + FLAM_A SINE Alu 10 141 -1 1907 186 130 2 chr17 60345502 60345916 -29158637 - MLT1C LTR MaLR 0 467 1 412 152 0 0 chr17 60346165 60346231 -29158322 - FLAM SINE Alu -14 129 64 2135 132 3 3 chr17 60346298 60346608 -29157945 + AluSx SINE Alu 1 310 -2 351 303 108 22 chr17 60346960 60347145 -29157408 + MIR SINE MIR 49 249 -13 209 222 0 0 chr17 60347587 60347632 -29156921 + T-rich Low_complexity Low_complexity 1 45 0 1786 179 0 14 chr17 60347709 60348006 -29156547 - AluJo SINE Alu -19 293 1 25 31 0 0 chr17 60348278 60348310 -29156243 + AT_rich Low_complexity Low_complexity 1 32 0 887 119 31 19 chr17 60348335 60349146 -29155407 + (TTATA)n Simple_repeat Simple_repeat 1 997 0 33 25 0 0 chr17 60349221 60349261 -29155292 + AT_rich Low_complexity Low_complexity 1 40 0 41094 29 22 1 chr17 60349298 60355323 -29149230 + L1PA2 LINE L1 2 6155 0 371 113 14 0 chr17 60355980 60356051 -29148502 + (TA)n Simple_repeat Simple_repeat 2 73 0 2382 100 0 0 chr17 60356222 60356532 -29148021 + AluSq SINE Alu 1 310 -3 225 118 0 137 chr17 60357045 60357096 -29147457 - L2 LINE L2 -7 3306 3263 490 217 199 31 chr17 60357614 60357775 -29146778 - MIR SINE MIR -29 233 46 1655 184 40 7 chr17 60357904 60358203 -29146350 + AluJo SINE Alu 1 309 -3 213 175 0 0 chr17 60358269 60358309 -29146244 + (CA)n Simple_repeat Simple_repeat 1 40 0 204 40 0 0 chr17 60359156 60359181 -29145372 + (GA)n Simple_repeat Simple_repeat 2 26 0 729 318 87 49 chr17 60359479 60360124 -29144429 - L2 LINE L2 0 3272 2609 676 192 158 0 chr17 60360188 60360334 -29144219 + MER45A DNA AcHobo 10 178 0 399 358 20 7 chr17 60360676 60360824 -29143729 + MER5B DNA MER1_type 26 175 -3 222 250 16 31 chr17 60361919 60361983 -29142570 - L2 LINE L2 0 3313 3251 306 328 49 16 chr17 60362554 60362676 -29141877 - MIR SINE MIR -64 144 19 180 0 0 0 chr17 60362676 60362696 -29141857 + (T)n Simple_repeat Simple_repeat 1 20 0 1739 213 52 18 chr17 60362995 60363442 -29141111 + MLT1C LTR MaLR 6 467 0 2343 95 7 3 chr17 60364136 60364441 -29140112 - AluSx SINE Alu -6 306 1 1974 122 0 40 chr17 60364850 60365146 -29139407 + AluSx SINE Alu 1 284 -28 2057 317 120 50 chr17 60365217 60365620 -29138933 - L2 LINE L2 -874 2440 2067 1774 202 57 34 chr17 60365620 60366007 -29138546 - MSTD LTR MaLR 0 396 1 2057 317 120 50 chr17 60366007 60367481 -29137072 - L2 LINE L2 -1247 2067 431 909 238 78 58 chr17 60367481 60367863 -29136690 - MLT1D LTR MaLR 0 505 116 2829 174 23 4 chr17 60367873 60368385 -29136168 - Tigger7 DNA MER2_type -1965 522 1 1801 130 27 34 chr17 60368433 60368725 -29135828 + AluSx SINE Alu 4 293 -19 1235 293 59 49 chr17 60369351 60369932 -29134621 + L2 LINE L2 2489 3079 -234 2226 154 22 0 chr17 60369932 60370288 -29134265 - THE1B LTR MaLR 0 364 1 1235 293 59 49 chr17 60370288 60370524 -29134029 + L2 LINE L2 3079 3311 -2 1436 201 44 41 chr17 60370632 60370831 -29133722 + MLT1B LTR MaLR 1 203 -187 2418 87 0 3 chr17 60370831 60371130 -29133423 + AluSc SINE Alu 1 298 -11 1436 201 44 41 chr17 60371130 60371319 -29133234 + MLT1B LTR MaLR 203 390 0 4852 129 7 0 chr17 60371500 60372245 -29132308 - L1PA14 LINE L1 0 6161 5412 878 250 53 8 chr17 60372454 60372698 -29131855 - MIR SINE MIR -4 258 4 195 42 0 0 chr17 60372894 60372918 -29131635 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 2051 130 0 0 chr17 60373249 60373534 -29131019 - AluSx SINE Alu -22 290 6 452 286 6 56 chr17 60373642 60373707 -29130846 - MIR SINE MIR -40 222 155 1993 104 0 50 chr17 60373707 60374040 -29130513 - AluSx SINE Alu 0 318 1 452 286 6 56 chr17 60374040 60374138 -29130415 - MIR SINE MIR -107 155 68 182 293 61 12 chr17 60374977 60375059 -29129494 - MIR3 SINE MIR -6 202 117 189 323 15 31 chr17 60375762 60375827 -29128726 + L2 LINE L2 3198 3261 -11 890 177 0 0 chr17 60375945 60376092 -29128461 - FRAM SINE Alu -24 152 6 2158 121 10 3 chr17 60376121 60376427 -29128126 - AluSq SINE Alu 0 313 6 350 253 74 11 chr17 60376516 60376611 -29127942 + MIR3 SINE MIR 6 106 -102 894 172 7 0 chr17 60376922 60377067 -29127486 + AluJb SINE Alu 1 146 -166 1654 178 16 3 chr17 60377067 60377191 -29127362 + AluSc SINE Alu 1 122 -187 279 0 0 0 chr17 60377191 60377222 -29127331 + (CA)n Simple_repeat Simple_repeat 2 32 0 1654 178 16 3 chr17 60377222 60377401 -29127152 + AluSc SINE Alu 122 308 -1 2266 93 0 0 chr17 60378084 60378373 -29126180 + AluSg SINE Alu 1 289 -21 332 357 121 18 chr17 60378854 60379134 -29125419 + L2 LINE L2 2963 3271 -1 498 266 84 0 chr17 60380705 60380859 -29123694 - MIR SINE MIR -4 258 92 2080 107 30 46 chr17 60382053 60382419 -29122134 - THE1B LTR MaLR -2 362 3 515 321 13 6 chr17 60382901 60383060 -29121493 - MIR3 SINE MIR -24 184 25 1912 123 3 27 chr17 60383143 60383435 -29121118 - AluSx SINE Alu -27 285 1 32 0 0 0 chr17 60384282 60384314 -29120239 + AT_rich Low_complexity Low_complexity 1 32 0 293 206 56 40 chr17 60384392 60384518 -29120035 - HAL1 LINE L1 -110 2397 2270 267 257 76 0 chr17 60384546 60384651 -29119902 + HAL1 LINE L1 2110 2222 -285 2448 50 0 13 chr17 60384666 60384969 -29119584 - AluY SINE Alu -12 299 1 1113 148 12 0 chr17 60385001 60385170 -29119383 - FRAM SINE Alu -8 168 1 1474 252 102 54 chr17 60385336 60386073 -29118480 - HAL1 LINE L1 -417 2090 1319 2971 81 21 12 chr17 60386075 60386494 -29118059 - L1PB1 LINE L1 -1 6150 5728 407 248 19 9 chr17 60386663 60386768 -29117785 - HAL1 LINE L1 -1820 687 582 375 309 90 67 chr17 60386777 60386807 -29117746 - HAL1 LINE L1 -2044 463 435 207 0 0 0 chr17 60386807 60386830 -29117723 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 375 309 90 67 chr17 60386830 60387155 -29117398 - HAL1 LINE L1 -2072 435 100 744 320 144 25 chr17 60387479 60387516 -29117037 + L3 LINE CR1 702 733 -844 2178 87 0 3 chr17 60387516 60387802 -29116751 + AluSg SINE Alu 24 308 -2 744 320 144 25 chr17 60387802 60388327 -29116226 + L3 LINE CR1 733 1331 -246 257 279 0 10 chr17 60388651 60388755 -29115798 + T-rich Low_complexity Low_complexity 6 108 0 1416 126 8 4 chr17 60388791 60389029 -29115524 - L1MA4 LINE L1 -9 6291 6053 272 238 25 0 chr17 60389033 60389113 -29115440 - L1MA10 LINE L1 -13 6321 6240 311 229 49 45 chr17 60389120 60389408 -29115145 - L1MEc LINE L1 -4076 2531 2076 360 0 0 0 chr17 60389428 60389468 -29115085 + (TA)n Simple_repeat Simple_repeat 2 41 0 2162 134 0 3 chr17 60389468 60389775 -29114778 - AluSp SINE Alu -7 306 1 463 286 30 10 chr17 60389785 60389988 -29114565 - L1MEc LINE L1 -4743 1683 1477 3449 247 31 67 chr17 60390093 60390175 -29114378 - L1MEc LINE L1 -4877 1519 1436 2199 89 10 3 chr17 60390175 60390477 -29114076 + AluSg SINE Alu 2 305 -5 3449 247 31 67 chr17 60390477 60391079 -29113474 - L1MEc LINE L1 -4960 1436 814 2257 71 0 3 chr17 60391079 60391374 -29113179 - L1PA7 LINE L1 0 6154 5861 3449 247 31 67 chr17 60391374 60392232 -29112321 - L1MEc LINE L1 -5582 814 32 1954 134 0 24 chr17 60392264 60392554 -29111999 + AluSx SINE Alu 1 334 0 460 0 0 0 chr17 60392554 60392605 -29111948 + (CAAAA)n Simple_repeat Simple_repeat 2 175 0 22 35 0 0 chr17 60392844 60392873 -29111680 + AT_rich Low_complexity Low_complexity 1 29 0 2325 109 0 3 chr17 60392875 60393186 -29111367 + AluSg SINE Alu 1 310 0 260 273 41 66 chr17 60393208 60393329 -29111224 + L2 LINE L2 3115 3232 -81 * 342 301 14 48 chr17 60393328 60393474 -29111079 - MER5A DNA MER1_type -32 157 17 1806 137 102 0 chr17 60393509 60393824 -29110729 + MER7A DNA MER2_type 2 346 0 211 278 0 0 chr17 60393849 60393903 -29110650 + (TG)n Simple_repeat Simple_repeat 1 54 0 248 274 21 53 chr17 60393951 60394046 -29110507 - L2 LINE L2 -545 2769 2678 374 250 76 52 chr17 60394099 60394300 -29110253 + MIR SINE MIR 17 226 -36 1812 181 0 22 chr17 60394558 60394873 -29109680 + AluJb SINE Alu 1 308 -4 230 258 16 8 chr17 60395079 60395150 -29109403 + CT-rich Low_complexity Low_complexity 2 125 0 1334 307 114 27 chr17 60395486 60396472 -29108081 - L2 LINE L2 -24 3289 2210 402 295 86 28 chr17 60396509 60396909 -29107644 - MLT1J LTR MaLR -40 471 1 945 184 40 79 chr17 60396937 60397165 -29107388 - MER20 DNA MER1_type 0 219 1 1146 317 60 14 chr17 60397171 60397685 -29106868 - L2 LINE L2 -1131 2183 1646 263 219 0 16 chr17 60397810 60397874 -29106679 + MLT1A2 LTR MaLR 1 63 -311 1780 218 37 78 chr17 60398082 60398711 -29105842 - LTR9 LTR ERV1 0 612 10 679 89 0 40 chr17 60399599 60399700 -29104853 + U6 snRNA snRNA 1 97 -10 419 285 105 49 chr17 60399841 60400287 -29104266 - L1M4 LINE L1 -1070 5076 4606 494 289 107 40 chr17 60400289 60400662 -29103891 - L1MEc LINE L1 -3976 2420 2023 275 328 0 16 chr17 60400970 60401098 -29103455 - HAL1 LINE L1 -861 1646 1521 243 266 14 108 chr17 60401266 60401436 -29103117 - L1MEc LINE L1 -4893 1312 1192 1725 211 0 6 chr17 60401436 60401748 -29102805 - AluJo SINE Alu -2 310 1 243 266 14 108 chr17 60401748 60401938 -29102615 - L1MEc LINE L1 -5013 1192 986 30 69 0 0 chr17 60401938 60401996 -29102557 + AT_rich Low_complexity Low_complexity 1 58 0 21 57 0 0 chr17 60402021 60402056 -29102497 + AT_rich Low_complexity Low_complexity 1 35 0 1732 174 0 39 chr17 60402638 60402965 -29101588 - AluJb SINE Alu 0 312 1 449 245 84 60 chr17 60404046 60404295 -29100258 + L1MC5 LINE L1 7529 7783 -178 16752 32 1 6 chr17 60404300 60405827 -29098726 - L1P LINE L1 -1786 4360 2844 2565 71 0 0 chr17 60405827 60406137 -29098416 - AluY SINE Alu -1 310 1 16752 32 1 6 chr17 60406137 60406776 -29097777 - L1P LINE L1 -3302 2844 2204 8743 27 1 0 chr17 60406776 60408593 -29095960 + L1PA4 LINE L1 4351 6168 0 2087 108 7 0 chr17 60409459 60409765 -29094788 + AluSg SINE Alu 3 310 0 411 303 138 0 chr17 60409819 60410014 -29094539 - L1MCa LINE L1 -4928 1498 1277 35 71 0 0 chr17 60410072 60410142 -29094411 + AT_rich Low_complexity Low_complexity 1 70 0 207 0 0 0 chr17 60410409 60410432 -29094121 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 1310 76 0 0 chr17 60410434 60410606 -29093947 - L1PA8 LINE L1 -1 6171 6000 1119 236 6 70 chr17 60410659 60411015 -29093538 + MLT1A1 LTR MaLR 33 365 0 22 0 0 0 chr17 60411093 60411115 -29093438 + AT_rich Low_complexity Low_complexity 1 22 0 531 286 146 30 chr17 60411309 60411679 -29092874 - MLT1H1 LTR MaLR 0 555 143 340 171 23 0 chr17 60411780 60411868 -29092685 + HSMAR2 DNA Mariner 1210 1299 -3 509 296 82 38 chr17 60412079 60412397 -29092156 + L1ME LINE L1 5493 5824 -297 2182 127 3 0 chr17 60412454 60412762 -29091791 + AluSq SINE Alu 1 309 -4 936 193 28 0 chr17 60412976 60413152 -29091401 + Tigger3(Golem) DNA MER2_type 1 181 -2848 402 329 21 7 chr17 60413935 60414075 -29090478 - MIR SINE MIR -120 142 1 295 331 83 30 chr17 60414699 60414777 -29089776 - MIR SINE MIR -118 144 55 2274 122 0 3 chr17 60414777 60415088 -29089465 + AluSg SINE Alu 1 310 0 295 331 83 30 chr17 60415088 60415142 -29089411 - MIR SINE MIR -207 55 5 302 338 84 67 chr17 60415155 60415572 -29088981 - L2 LINE L2 -10 3262 2839 380 293 23 30 chr17 60415612 60415745 -29088808 - MIR SINE MIR 0 262 131 467 273 15 0 chr17 60416354 60416486 -29088067 - MER94 DNA DNA 0 134 1 2306 114 3 0 chr17 60417577 60417885 -29086668 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr17 60417960 60417981 -29086572 + AT_rich Low_complexity Low_complexity 1 21 0 1478 46 15 0 chr17 60418625 60418820 -29085733 - L1MA1 LINE L1 -8 6294 6097 1065 34 20 0 chr17 60418821 60418970 -29085583 - L1MA1 LINE L1 -110 6192 6041 1026 172 6 6 chr17 60420627 60420801 -29083752 + AluJb SINE Alu 137 310 -2 453 219 7 73 chr17 60421206 60421343 -29083210 + L2 LINE L2 3181 3308 -5 24 32 0 0 chr17 60421390 60421421 -29083132 + AT_rich Low_complexity Low_complexity 1 31 0 1531 167 10 47 chr17 60421428 60421728 -29082825 - AluJo SINE Alu -23 289 1 294 274 101 30 chr17 60421897 60422065 -29082488 - L2 LINE L2 0 3313 3134 236 298 106 11 chr17 60422073 60422167 -29082386 - MIR SINE MIR -1 261 159 1102 83 0 0 chr17 60422173 60422306 -29082247 + AluSp SINE Alu 1 133 -180 4091 171 25 33 chr17 60422310 60423106 -29081447 + MER52A LTR ERV1 966 1755 0 1724 120 41 19 chr17 60423107 60423587 -29080966 - L1P5 LINE L1 -598 5556 5063 2099 95 0 0 chr17 60423748 60424022 -29080531 + AluY SINE Alu 30 303 -8 442 332 21 21 chr17 60424571 60424761 -29079792 - MIR SINE MIR -58 204 15 282 171 61 24 chr17 60424863 60424945 -29079608 - L1MB8 LINE L1 0 6178 6094 1029 159 48 9 chr17 60424965 60425192 -29079361 - L1MB4 LINE L1 -6 6174 5939 227 294 0 15 chr17 60425216 60425284 -29079269 + L2 LINE L2 3246 3312 -1 2149 101 28 0 chr17 60426125 60426412 -29078141 + AluSg1 SINE Alu 1 295 -14 462 208 24 8 chr17 60427245 60427370 -29077183 - LTR37B LTR ERV1 0 468 342 586 223 80 86 chr17 60427471 60427772 -29076781 - LTR37B LTR ERV1 -164 304 6 1082 311 122 34 chr17 60428020 60429088 -29075465 + L2 LINE L2 2145 3312 -1 240 356 12 25 chr17 60429531 60429691 -29074862 + L2 LINE L2 2897 3054 -218 533 269 70 13 chr17 60429785 60429941 -29074612 + MIR SINE MIR 2 166 -96 818 85 8 8 chr17 60429945 60430063 -29074490 - AluSp/q SINE Alu -14 299 182 890 224 77 33 chr17 60430063 60430362 -29074191 - MER52A LTR ERV1 -1442 313 2 3740 109 36 5 chr17 60430362 60430941 -29073612 + L1PB3 LINE L1 5553 6149 -5 219 245 0 0 chr17 60430947 60430996 -29073557 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 305 159 16 0 chr17 60431009 60431072 -29073481 + (TA)n Simple_repeat Simple_repeat 1 64 0 34 19 0 19 chr17 60431097 60431122 -29073431 + AT_rich Low_complexity Low_complexity 1 25 -26 1916 173 0 3 chr17 60431122 60431423 -29073130 - AluSx SINE Alu -12 300 1 34 19 0 19 chr17 60431423 60431449 -29073104 + AT_rich Low_complexity Low_complexity 25 51 0 2250 110 3 0 chr17 60432079 60432370 -29072183 - AluSx SINE Alu -20 292 1 334 292 71 9 chr17 60432779 60432892 -29071661 + L2 LINE L2 3186 3305 -8 300 333 0 40 chr17 60432954 60433080 -29071473 + L2 LINE L2 2705 2825 -489 23 33 0 0 chr17 60433521 60433551 -29071002 + AT_rich Low_complexity Low_complexity 1 30 0 486 49 0 0 chr17 60434046 60434107 -29070446 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1878 146 16 32 chr17 60434110 60434418 -29070135 - AluSx SINE Alu -9 303 1 740 292 39 0 chr17 60436449 60436682 -29067871 + MIR SINE MIR 7 248 -14 322 309 48 48 chr17 60436822 60436990 -29067563 + MIR SINE MIR 20 187 -75 282 314 51 22 chr17 60437219 60437356 -29067197 + MIR SINE MIR 47 187 -75 283 250 0 0 chr17 60437382 60437438 -29067115 - L2 LINE L2 -25 3247 3192 180 0 0 0 chr17 60437511 60437531 -29067022 + (CAT)n Simple_repeat Simple_repeat 3 22 0 51 65 0 0 chr17 60437556 60437649 -29066904 + AT_rich Low_complexity Low_complexity 1 93 0 186 282 0 0 chr17 60437786 60437825 -29066728 + MER5B DNA MER1_type 140 178 0 1051 195 53 8 chr17 60437924 60438186 -29066367 + L1ME3 LINE L1 5754 6027 -135 23 0 0 0 chr17 60438321 60438344 -29066209 + AT_rich Low_complexity Low_complexity 1 23 0 2134 143 24 21 chr17 60438357 60438729 -29065824 - THE1C LTR MaLR 0 375 3 575 176 28 11 chr17 60438778 60438954 -29065599 + (TA)n Simple_repeat Simple_repeat 2 180 0 494 384 25 0 chr17 60440734 60440893 -29063660 + L2 LINE L2 3106 3268 -4 285 29 0 0 chr17 60442789 60442823 -29061730 + (A)n Simple_repeat Simple_repeat 1 34 0 2249 271 71 52 chr17 60443171 60443746 -29060807 - L1M4 LINE L1 -2129 3841 3279 6098 94 11 22 chr17 60443746 60444865 -29059688 - L1PB3 LINE L1 -4 6150 5042 2249 271 71 52 chr17 60444865 60445985 -29058568 - L1M4 LINE L1 -2691 3279 2104 2385 67 3 10 chr17 60445985 60446285 -29058268 - AluY SINE Alu -13 298 1 2249 271 71 52 chr17 60446285 60446460 -29058093 - L1M4 LINE L1 -3866 2104 1934 1387 205 147 18 chr17 60446610 60447059 -29057494 - Charlie1b DNA MER1_type -16 507 1 1037 207 5 5 chr17 60447068 60447256 -29057297 - MER5A DNA MER1_type -1 188 1 2203 104 0 35 chr17 60447322 60447639 -29056914 - AluSx SINE Alu -4 308 3 9917 227 61 30 chr17 60447656 60448288 -29056265 - L1MB2 LINE L1 0 5995 5384 1618 182 7 14 chr17 60448288 60448574 -29055979 - AluJb SINE Alu -26 286 3 9917 227 61 30 chr17 60448574 60448695 -29055858 - L1MB2 LINE L1 -611 5384 5268 2480 145 71 0 chr17 60448695 60449115 -29055438 + LTR47A LTR ERVL 3 452 0 9917 227 61 30 chr17 60449115 60449321 -29055232 - L1MB2 LINE L1 -727 5268 5070 2100 147 20 3 chr17 60449321 60449676 -29054877 + MER46B DNA MER2_type 1 236 0 9917 227 61 30 chr17 60449676 60454197 -29050356 - L1MB2 LINE L1 -925 5070 387 354 362 5 25 chr17 60454321 60454503 -29050050 - L1M4 LINE L1 -5213 678 237 550 305 45 60 chr17 60454598 60454995 -29049558 - L1MB2 LINE L1 -5500 391 1 312 310 30 85 chr17 60455147 60455712 -29048841 - HAL1 LINE L1 -849 1658 1125 274 296 105 13 chr17 60456870 60456905 -29047648 + MIR SINE MIR 83 113 -149 2546 65 0 0 chr17 60456905 60457215 -29047338 - AluY SINE Alu -1 310 1 274 296 105 13 chr17 60457215 60457331 -29047222 + MIR SINE MIR 113 248 -14 285 98 0 0 chr17 60459420 60459461 -29045092 + (TG)n Simple_repeat Simple_repeat 1 41 0 2247 116 0 3 chr17 60459584 60459894 -29044659 - AluSc SINE Alu 0 309 1 386 276 89 64 chr17 60460461 60460664 -29043889 + MIR SINE MIR 29 236 -26 1077 221 78 40 chr17 60460751 60461072 -29043481 - MLT1C LTR MaLR 0 467 127 2005 131 0 29 chr17 60461072 60461408 -29043145 + AluSx SINE Alu 1 312 0 1077 221 78 40 chr17 60461408 60461484 -29043069 - MLT1C LTR MaLR -340 127 55 414 336 84 40 chr17 60461526 60461847 -29042706 + L2 LINE L2 2551 2885 -429 225 271 34 0 chr17 60462578 60462637 -29041916 + MIR3 SINE MIR 139 199 -9 2086 99 48 10 chr17 60462840 60463134 -29041419 - AluSc SINE Alu -4 305 1 1022 84 30 0 chr17 60463160 60463327 -29041226 + (TTTC)n Simple_repeat Simple_repeat 1 172 0 322 137 14 27 chr17 60463336 60463409 -29041144 + CT-rich Low_complexity Low_complexity 3 74 0 651 283 86 3 chr17 60463874 60464164 -29040389 + L1ME4a LINE L1 5550 5863 -258 1484 104 41 0 chr17 60464228 60464449 -29040104 - MER30 DNA MER1_type 0 230 1 22 70 0 0 chr17 60464607 60464650 -29039903 + AT_rich Low_complexity Low_complexity 1 43 0 290 317 100 8 chr17 60464818 60464938 -29039615 - L2 LINE L2 0 3313 3183 683 324 101 0 chr17 60464985 60465291 -29039262 - MLT1J2 LTR MaLR -39 411 75 362 307 90 42 chr17 60465675 60465841 -29038712 + MIR SINE MIR 37 210 -52 25 51 0 0 chr17 60465889 60465928 -29038625 + AT_rich Low_complexity Low_complexity 1 39 0 692 282 99 27 chr17 60466172 60466718 -29037835 - L1MC4a LINE L1 -403 5759 5278 311 338 116 26 chr17 60466955 60467257 -29037296 - L1MC4a LINE L1 -1131 5015 4687 391 305 130 73 chr17 60467419 60467623 -29036930 - L1MC4a LINE L1 -1672 4474 4283 1549 111 4 0 chr17 60467623 60467857 -29036696 - L1MA6 LINE L1 -5 6295 6061 391 305 130 73 chr17 60467857 60468405 -29036148 - L1MC4a LINE L1 -1863 4283 3679 524 304 93 46 chr17 60468501 60468997 -29035556 - L1MC4a LINE L1 -2682 3464 2946 533 228 24 6 chr17 60469469 60469636 -29034917 - MER104 DNA Tc2 -10 170 1 544 287 69 9 chr17 60470441 60470659 -29033894 + MIR SINE MIR 17 247 -15 2333 94 0 54 chr17 60471498 60471829 -29032724 + AluSp SINE Alu 1 313 0 273 278 56 11 chr17 60472204 60472294 -29032259 - MIR SINE MIR -57 205 112 318 180 0 0 chr17 60472710 60472771 -29031782 + (TG)n Simple_repeat Simple_repeat 2 62 0 2515 107 17 3 chr17 60473982 60474336 -29030217 - THE1B LTR MaLR -1 363 5 465 19 0 0 chr17 60474336 60474390 -29030163 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 406 205 0 0 chr17 60474928 60475006 -29029547 + MER96 DNA MER1_type? 2 79 -96 2728 280 114 48 chr17 60475142 60476182 -29028371 - HAL1 LINE L1 -181 2326 1356 1213 237 154 28 chr17 60476182 60476675 -29027878 - MLT1H1 LTR MaLR 0 555 1 2728 280 114 48 chr17 60476675 60477816 -29026737 - HAL1 LINE L1 -1151 1356 1 583 214 47 94 chr17 60478120 60478354 -29026199 - MIR SINE MIR -31 231 9 1870 145 13 20 chr17 60478620 60478924 -29025629 + AluJb SINE Alu 1 302 -10 340 366 8 25 chr17 60478952 60479184 -29025369 - MIR SINE MIR -19 243 19 196 309 162 0 chr17 60479319 60479387 -29025166 + MIR SINE MIR 76 154 -108 376 273 167 0 chr17 60479663 60479813 -29024740 - MER5A DNA MER1_type -6 183 9 218 222 0 144 chr17 60479847 60479937 -29024616 + MIR SINE MIR 74 150 -58 1508 188 17 20 chr17 60479957 60480250 -29024303 - AluJo SINE Alu -20 292 1 2083 118 43 38 chr17 60480315 60480688 -29023865 + THE1C LTR MaLR 1 375 0 237 295 21 0 chr17 60481373 60481468 -29023085 + MLT1F1-int LTR MaLR 504 600 -771 268 326 33 28 chr17 60481641 60481822 -29022731 + MLT1F1-int LTR MaLR 701 882 -489 262 268 62 117 chr17 60482049 60482340 -29022213 + MLT1F1-int LTR MaLR 1072 1346 -25 629 286 57 65 chr17 60482374 60482627 -29021926 + MLT1F1 LTR MaLR 7 257 -310 754 141 8 0 chr17 60482627 60482748 -29021805 - FLAM_C SINE Alu -11 122 1 629 286 57 65 chr17 60482748 60482896 -29021657 + MLT1F1 LTR MaLR 257 405 -162 2710 211 101 20 chr17 60482900 60484078 -29020475 - L1MB7 LINE L1 -11 6173 4848 1214 122 9 19 chr17 60484078 60484292 -29020261 - L1MA5A LINE L1 -3 6294 6083 2710 211 101 20 chr17 60484292 60484533 -29020020 - L1MB7 LINE L1 -1336 4848 4628 677 198 17 62 chr17 60484533 60484710 -29019843 + MLT1F1 LTR MaLR 399 567 0 266 61 0 0 chr17 60484971 60485004 -29019549 + MER58 DNA MER1_type 2388 2420 0 283 322 0 0 chr17 60485004 60485094 -29019459 - L2 LINE L2 -1036 2278 2189 216 292 45 11 chr17 60485775 60485864 -29018689 - L3b LINE CR1 -206 1377 1286 186 301 118 73 chr17 60486017 60486040 -29018513 + MIR3 SINE MIR 20 41 -167 1762 184 45 11 chr17 60486040 60486393 -29018160 - MLT1A1 LTR MaLR 0 365 1 186 301 118 73 chr17 60486393 60486505 -29018048 + MIR3 SINE MIR 41 161 -47 394 330 45 9 chr17 60488601 60488713 -29015840 + L2 LINE L2 3148 3263 -9 1223 194 70 30 chr17 60489177 60489506 -29015047 + MLT1E3 LTR MaLR 278 619 -5 1693 146 33 36 chr17 60489734 60490009 -29014544 + AluJo SINE Alu 38 311 -1 216 250 185 37 chr17 60490118 60490226 -29014327 - MIR3 SINE MIR -73 135 12 323 310 52 17 chr17 60490718 60490834 -29013719 - L2 LINE L2 0 3272 3153 182 293 0 0 chr17 60491157 60491198 -29013355 + L2 LINE L2 3266 3306 -7 863 193 11 6 chr17 60492204 60492380 -29012173 + MER20 DNA MER1_type 43 219 0 2230 62 0 86 chr17 60492546 60492871 -29011682 - AluY SINE Alu -14 297 1 277 268 163 44 chr17 60494695 60494842 -29009711 + MIR3 SINE MIR 3 156 -62 1427 275 48 3 chr17 60495826 60496216 -29008337 - LTR33 LTR ERVL -19 502 93 301 304 0 70 chr17 60496339 60496454 -29008099 + MIR3 SINE MIR 10 116 -92 215 326 106 51 chr17 60497480 60497716 -29006837 + L2 LINE L2 2969 3217 -55 1464 183 22 61 chr17 60498097 60498409 -29006144 + AluJb SINE Alu 1 300 -12 184 293 98 0 chr17 60498530 60498612 -29005941 + L2 LINE L2 2619 2708 -606 526 281 39 54 chr17 60498774 60498977 -29005576 - MIR SINE MIR -14 248 49 372 287 35 0 chr17 60499306 60499421 -29005132 + L2 LINE L2 3192 3310 -3 23 0 0 0 chr17 60499708 60499731 -29004822 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr17 60500730 60500760 -29003793 + AT_rich Low_complexity Low_complexity 1 30 0 256 159 0 0 chr17 60500761 60500805 -29003748 - L1MA4A LINE L1 -5 6298 6255 2212 188 66 22 chr17 60500981 60501438 -29003115 - MLT1D LTR MaLR -26 479 3 2012 222 27 49 chr17 60501433 60501947 -29002606 - MLT1D LTR MaLR -2 503 1 * 346 284 55 24 chr17 60501988 60502115 -29002438 - MIR SINE MIR -62 146 16 2151 132 134 16 chr17 60502510 60502890 -29001663 + MSTA LTR MaLR 1 425 -3 256 200 0 0 chr17 60503256 60503301 -29001252 + L2 LINE L2 3192 3236 -77 979 129 71 0 chr17 60504336 60504506 -29000047 + L1MA3 LINE L1 6124 6305 0 2989 204 50 11 chr17 60504631 60505274 -28999279 + L1MB8 LINE L1 5511 6178 0 340 284 69 9 chr17 60505398 60505514 -28999039 + MIR SINE MIR 50 172 -90 1760 64 5 0 chr17 60505917 60506135 -28998418 + L1MA1 LINE L1 6084 6302 0 186 209 23 0 chr17 60506977 60507020 -28997533 - L2 LINE L2 -4 3268 3225 27 0 0 0 chr17 60507587 60507614 -28996939 + AT_rich Low_complexity Low_complexity 1 27 0 195 246 0 0 chr17 60507625 60507682 -28996871 + CT-rich Low_complexity Low_complexity 1 57 0 286 325 24 24 chr17 60507685 60507792 -28996761 + L2 LINE L2 3137 3246 -26 306 106 0 0 chr17 60507792 60507839 -28996714 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 191 321 0 0 chr17 60507839 60507895 -28996658 - L2 LINE L2 -10 3303 3248 369 283 40 52 chr17 60507995 60508168 -28996385 + MIR SINE MIR 27 197 -65 817 210 66 6 chr17 60509642 60509809 -28994744 + MIR SINE MIR 65 241 -21 282 217 0 0 chr17 60509913 60509982 -28994571 + (TATG)n Simple_repeat Simple_repeat 4 72 0 187 240 93 27 chr17 60510956 60511031 -28993522 - MIR SINE MIR -18 244 165 655 282 7 86 chr17 60511134 60511414 -28993139 + MIR SINE MIR 5 262 0 2202 121 0 0 chr17 60511488 60511785 -28992768 - AluSx SINE Alu -15 297 1 870 213 7 0 chr17 60511822 60511972 -28992581 + FRAM SINE Alu 4 154 -12 1355 215 150 26 chr17 60512018 60512404 -28992149 - MER57B LTR ERV1 0 434 1 307 290 46 83 chr17 60513368 60513585 -28990968 + MIR SINE MIR 49 257 -5 205 372 47 12 chr17 60514342 60514428 -28990125 - L2 LINE L2 -73 3199 3111 419 241 111 30 chr17 60515233 60515418 -28989135 + MIR SINE MIR 10 212 -50 254 164 18 0 chr17 60516202 60516257 -28988296 + (TCTCTG)n Simple_repeat Simple_repeat 5 60 0 321 299 160 35 chr17 60516757 60516988 -28987565 + MIR SINE MIR 3 262 0 260 347 83 16 chr17 60517567 60517688 -28986865 - L2 LINE L2 -1 3271 3143 192 40 0 0 chr17 60517935 60517960 -28986593 + (TTG)n Simple_repeat Simple_repeat 1 25 0 1747 169 10 13 chr17 60519313 60519626 -28984927 + AluJb SINE Alu 1 312 0 414 250 71 45 chr17 60519768 60519880 -28984673 - MIR3 SINE MIR -47 161 47 2318 219 57 6 chr17 60520118 60520610 -28983943 - LTR53 LTR ERVL 0 519 3 338 358 19 19 chr17 60521617 60521779 -28982774 + CT-rich Low_complexity Low_complexity 5 166 0 274 297 72 43 chr17 60522042 60522180 -28982373 + MIR3 SINE MIR 15 156 -52 660 45 0 0 chr17 60522486 60522574 -28981979 + (TG)n Simple_repeat Simple_repeat 2 89 0 581 112 71 20 chr17 60523631 60523729 -28980824 + THE1C LTR MaLR 1 103 -272 1738 169 62 56 chr17 60523733 60524106 -28980447 - THE1C LTR MaLR 0 375 1 9382 122 38 11 chr17 60524106 60525529 -28979024 - THE1C-int LTR MaLR 0 1580 120 452 162 0 0 chr17 60525630 60525704 -28978849 + MSTA LTR MaLR 355 428 0 1331 197 36 30 chr17 60527358 60527663 -28976890 + AluJo SINE Alu 1 307 -5 2469 70 0 0 chr17 60527716 60528014 -28976539 + AluY SINE Alu 1 298 -13 221 276 126 0 chr17 60530637 60530724 -28973829 - L2 LINE L2 -50 3222 3125 213 244 0 49 chr17 60531087 60531169 -28973384 + CT-rich Low_complexity Low_complexity 2 79 0 276 363 44 0 chr17 60531567 60531680 -28972873 - L2 LINE L2 -10 3262 3145 260 196 0 0 chr17 60531778 60531834 -28972719 + L1ME4a LINE L1 6062 6117 -4 222 303 59 29 chr17 60532102 60532277 -28972276 + L2 LINE L2 2816 2992 -321 807 254 47 19 chr17 60532300 60532311 -28972242 + MER20 DNA MER1_type 1 10 -209 315 0 0 0 chr17 60532311 60532346 -28972207 + (TG)n Simple_repeat Simple_repeat 1 35 0 807 254 47 19 chr17 60532346 60532547 -28972006 + MER20 DNA MER1_type 10 219 0 235 304 0 0 chr17 60532660 60532716 -28971837 + L2 LINE L2 3168 3223 -49 542 47 12 47 chr17 60533984 60534069 -28970484 - L1MA4A LINE L1 -4 6299 6218 225 212 10 61 chr17 60534170 60534269 -28970284 - L1MC4 LINE L1 -1339 6703 6610 497 284 29 44 chr17 60534568 60534772 -28969781 - MIR SINE MIR -28 234 34 753 301 87 19 chr17 60534856 60535225 -28969328 - LTR33 LTR ERVL -3 518 125 195 250 0 0 chr17 60536094 60536130 -28968423 - MIR SINE MIR -58 150 115 239 217 120 43 chr17 60536276 60536368 -28968185 + MIR SINE MIR 107 205 -57 425 146 21 62 chr17 60536517 60536613 -28967940 - L1MC3 LINE L1 0 7785 7694 1982 320 87 40 chr17 60536613 60538064 -28966489 + L2 LINE L2 1623 3138 -175 195 258 108 21 chr17 60538090 60538183 -28966370 + L2 LINE L2 3171 3271 -1 2341 162 28 14 chr17 60538284 60538643 -28965910 + THE1B LTR MaLR 1 364 0 12265 105 3 2 chr17 60538643 60540217 -28964336 + THE1B-int LTR MaLR 1 1576 -4 2273 155 34 8 chr17 60540222 60540577 -28963976 + THE1B LTR MaLR 1 364 0 391 333 76 18 chr17 60540793 60540964 -28963589 - MIR SINE MIR -32 230 50 401 214 71 0 chr17 60541214 60541298 -28963255 - L2 LINE L2 -23 3249 3160 576 296 63 85 chr17 60541610 60541975 -28962578 - L2 LINE L2 -767 2547 2191 285 260 13 13 chr17 60542661 60542738 -28961815 + MLT1L LTR MaLR 3 79 -536 243 213 16 0 chr17 60542760 60542821 -28961732 - MER116 DNA Mariner -12 68 7 271 232 0 24 chr17 60543069 60543151 -28961402 + MLT1J LTR MaLR 431 510 -1 506 270 22 27 chr17 60543339 60543524 -28961029 - MIR SINE MIR 0 262 79 1031 206 15 10 chr17 60543679 60543883 -28960670 + MER3 DNA MER1_type 3 207 -2 299 255 90 19 chr17 60544618 60544752 -28959801 + MIR3 SINE MIR 1 150 -67 502 300 20 35 chr17 60545250 60545450 -28959103 + L2 LINE L2 2577 2773 -541 1071 225 28 0 chr17 60545492 60545710 -28958843 - MER58A DNA MER1_type 0 224 1 295 262 227 7 chr17 60546689 60546830 -28957723 - MIR SINE MIR -7 255 84 243 0 0 0 chr17 60547466 60547493 -28957060 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 283 228 63 0 chr17 60547527 60547606 -28956947 + L1ME3 LINE L1 6077 6160 -2 545 264 59 46 chr17 60548581 60548820 -28955733 - L1MC5 LINE L1 -17 7944 7703 212 248 221 0 chr17 60548841 60548954 -28955599 + L2 LINE L2 3172 3309 -4 2260 109 3 3 chr17 60549429 60549731 -28954822 - AluSp SINE Alu -11 302 1 503 296 111 9 chr17 60549882 60550108 -28954445 + LTR33 LTR ERVL 1 249 -272 2333 122 60 28 chr17 60550159 60550512 -28954041 - THE1B LTR MaLR 0 364 1 350 100 0 0 chr17 60550637 60550687 -28953866 - L1PA16 LINE L1 0 6166 6117 21 0 0 0 chr17 60551908 60551929 -28952624 + AT_rich Low_complexity Low_complexity 1 21 0 2231 147 132 5 chr17 60553254 60553634 -28950919 - MSTA LTR MaLR 0 428 1 3919 94 171 40 chr17 60554102 60554710 -28949843 + LTR12 LTR ERV1 1 688 0 206 300 25 83 chr17 60554933 60555053 -28949500 + L2 LINE L2 2417 2529 -785 22 35 0 0 chr17 60555401 60555430 -28949123 + AT_rich Low_complexity Low_complexity 1 29 0 319 244 47 55 chr17 60555904 60556031 -28948522 + LTR67 LTR ERVL 426 551 -6 183 298 214 12 chr17 60556155 60556239 -28948314 - L2 LINE L2 -10 3262 3162 2493 143 42 3 chr17 60556459 60556843 -28947710 - MER57A LTR ERV1 -4 399 1 326 244 26 26 chr17 60557004 60557119 -28947434 - Charlie7 DNA MER1_type -9 2603 2489 367 224 61 91 chr17 60557359 60557524 -28947029 + L1MC5 LINE L1 7182 7341 -620 24 32 0 0 chr17 60557550 60557581 -28946972 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr17 60557594 60557621 -28946932 + AT_rich Low_complexity Low_complexity 1 27 0 1280 196 134 36 chr17 60557622 60557768 -28946785 + L1MC5 LINE L1 7351 7481 -480 2233 120 23 47 chr17 60557768 60558152 -28946401 + THE1C LTR MaLR 1 375 0 1280 196 134 36 chr17 60558152 60558474 -28946079 + L1MC5 LINE L1 7481 7865 -96 335 330 2 26 chr17 60558504 60558674 -28945879 - MER5B DNA MER1_type -18 171 7 430 269 107 13 chr17 60559652 60559801 -28944752 - MIR SINE MIR -84 178 16 26 0 0 0 chr17 60560262 60560288 -28944265 + AT_rich Low_complexity Low_complexity 1 26 0 234 269 15 15 chr17 60560351 60560418 -28944135 + L2 LINE L2 3247 3313 0 305 191 282 30 chr17 60561292 60561423 -28943130 + L1MC5 LINE L1 7751 7914 -47 219 239 22 0 chr17 60561834 60561880 -28942673 + CT-rich Low_complexity Low_complexity 2 48 0 224 234 13 13 chr17 60563786 60563801 -28940752 + (CAA)n Simple_repeat Simple_repeat 2 16 -62 2394 89 0 13 chr17 60563801 60564116 -28940437 + AluY SINE Alu 1 311 0 224 234 13 13 chr17 60564116 60564177 -28940376 + (CAA)n Simple_repeat Simple_repeat 15 78 0 341 298 25 61 chr17 60564426 60564580 -28939973 + MIR SINE MIR 2 151 -62 261 270 54 36 chr17 60565195 60565306 -28939247 + L2 LINE L2 2848 2960 -353 314 123 18 0 chr17 60565365 60565422 -28939131 + (CA)n Simple_repeat Simple_repeat 2 59 0 405 237 92 30 chr17 60565503 60565634 -28938919 + MER5B DNA MER1_type 39 177 -1 382 239 40 152 chr17 60565665 60566013 -28938540 + L2 LINE L2 3005 3313 0 221 288 15 15 chr17 60566018 60566084 -28938469 - MIR SINE MIR -188 74 9 211 286 0 16 chr17 60566372 60566435 -28938118 + GA-rich Low_complexity Low_complexity 1 62 0 2248 110 3 25 chr17 60567261 60567578 -28936975 + AluSx SINE Alu 1 310 -2 291 232 53 86 chr17 60567727 60567878 -28936675 + L2 LINE L2 2914 3059 -213 2124 104 0 44 chr17 60568207 60568525 -28936028 - AluSg SINE Alu -6 304 1 199 236 56 14 chr17 60568577 60568621 -28935932 - L2 LINE L2 -3 3269 3223 604 279 116 34 chr17 60568621 60568854 -28935699 + MIR SINE MIR 2 253 -9 782 273 40 8 chr17 60569075 60569328 -28935225 + L1ME3A LINE L1 5450 5710 -460 826 163 28 0 chr17 60569330 60569448 -28935105 - MLT1F LTR MaLR -2 565 444 284 194 0 16 chr17 60569448 60569510 -28935043 - ORSL DNA AcHobo 0 275 215 381 127 16 0 chr17 60569556 60569619 -28934934 - ORSL DNA AcHobo -211 64 1 1311 219 40 69 chr17 60569626 60570047 -28934506 - MLT1F LTR MaLR -131 411 3 523 244 0 0 chr17 60570070 60570185 -28934368 + L1ME3A LINE L1 5727 5841 -329 277 333 151 26 chr17 60571749 60571941 -28932612 - MIR SINE MIR -34 228 13 307 338 29 11 chr17 60572796 60572981 -28931572 - MIR SINE MIR -26 236 48 307 319 35 0 chr17 60573955 60574071 -28930482 + MIR SINE MIR 69 188 -74 520 263 83 32 chr17 60574371 60574588 -28929965 - MIR SINE MIR -6 256 29 1969 113 41 14 chr17 60574776 60575068 -28929485 - AluSx SINE Alu -12 300 1 451 269 94 41 chr17 60575733 60575904 -28928649 + MIR3 SINE MIR 17 196 -12 1739 170 0 57 chr17 60576340 60576658 -28927895 + AluJb SINE Alu 1 300 -12 434 277 88 19 chr17 60577453 60577612 -28926941 + MLT1K LTR MaLR 2 171 -417 749 285 59 19 chr17 60577843 60578099 -28926454 - LTR67 LTR ERVL -291 266 1 2147 109 0 10 chr17 60578286 60578588 -28925965 + AluSg SINE Alu 5 303 -7 2075 184 11 22 chr17 60578596 60578965 -28925588 + MLT1A1 LTR MaLR 1 365 0 316 282 23 46 chr17 60578999 60579130 -28925423 + MIR SINE MIR 59 186 -76 317 335 57 42 chr17 60580480 60580692 -28923861 - L2 LINE L2 -183 3089 2875 337 232 286 24 chr17 60585247 60585415 -28919138 - MIR SINE MIR -1 261 50 441 0 0 0 chr17 60587440 60587489 -28917064 + (TG)n Simple_repeat Simple_repeat 2 50 0 196 194 0 0 chr17 60590263 60590294 -28914259 - MIR SINE MIR -187 75 45 243 224 41 92 chr17 60590674 60590772 -28913781 - L2 LINE L2 -39 3274 3182 180 288 192 0 chr17 60593451 60593524 -28911029 + MIR SINE MIR 27 113 -95 305 243 0 14 chr17 60594483 60594553 -28910000 + MER5A DNA MER1_type 35 103 -86 432 0 0 0 chr17 60594566 60594614 -28909939 + (TG)n Simple_repeat Simple_repeat 2 49 0 193 330 96 9 chr17 60594715 60594830 -28909723 + L2 LINE L2 2722 2846 -468 188 232 18 18 chr17 60594921 60594977 -28909576 + L2 LINE L2 2997 3052 -220 1211 172 18 27 chr17 60595047 60595268 -28909285 - MER20 DNA MER1_type 0 219 1 227 385 27 47 chr17 60595314 60595462 -28909091 + L2 LINE L2 3123 3267 -5 406 255 88 48 chr17 60595471 60595690 -28908863 + MIR SINE MIR 28 253 -9 656 117 0 8 chr17 60596107 60596235 -28908318 + (TC)n Simple_repeat Simple_repeat 2 128 0 334 368 0 0 chr17 60596555 60596669 -28907884 - MIR3 SINE MIR -1 207 94 281 28 0 0 chr17 60597020 60597056 -28907497 - L1MB1 LINE L1 -1 6167 6132 2574 109 8 16 chr17 60597207 60597582 -28906971 - THE1C LTR MaLR 0 375 4 434 267 147 32 chr17 60598160 60598445 -28906108 - L1ME4a LINE L1 -35 6086 5769 2257 92 0 0 chr17 60599098 60599391 -28905162 + AluY SINE Alu 17 309 -2 858 265 33 75 chr17 60599899 60600258 -28904295 - MLT1G1 LTR MaLR 0 595 252 342 256 103 13 chr17 60600360 60600579 -28903974 - MLT1F1 LTR MaLR -329 266 14 788 189 74 0 chr17 60600645 60600793 -28903760 - FRAM SINE Alu -17 159 1 301 319 129 26 chr17 60600835 60601067 -28903486 + MIR SINE MIR 7 262 0 2333 93 0 3 chr17 60601075 60601376 -28903177 - AluSg SINE Alu -10 300 1 639 169 59 8 chr17 60601493 60601611 -28902942 + FLAM_C SINE Alu 1 124 -19 7696 25 0 0 chr17 60601889 60602898 -28901655 + L1PA3 LINE L1 5147 6155 0 1265 310 98 54 chr17 60602953 60603895 -28900658 - L2 LINE L2 -57 3256 2289 31 44 0 0 chr17 60605370 60605415 -28899138 + AT_rich Low_complexity Low_complexity 1 45 0 348 289 103 48 chr17 60605558 60605831 -28898722 - L1ME LINE L1 -299 5822 5535 286 311 195 31 chr17 60606379 60606636 -28897917 + MLT1L LTR MaLR 317 615 0 2750 176 65 17 chr17 60606649 60607247 -28897306 + MER92B LTR ERV1 3 629 -7 261 148 70 0 chr17 60607518 60607646 -28896907 + (TA)n Simple_repeat Simple_repeat 1 137 0 403 259 38 51 chr17 60607907 60608065 -28896488 - MIR SINE MIR -41 221 66 199 228 99 79 chr17 60608253 60608354 -28896199 - MIR3 SINE MIR -99 109 7 423 287 47 0 chr17 60608672 60608801 -28895752 + MIR SINE MIR 128 262 0 183 240 60 0 chr17 60608835 60608885 -28895668 - MIR SINE MIR -98 164 112 267 255 108 29 chr17 60608928 60609030 -28895523 - MIR SINE MIR -43 219 110 491 321 18 6 chr17 60609837 60610002 -28894551 - MIR SINE MIR -4 258 92 430 188 0 0 chr17 60611403 60611472 -28893081 + MER5A DNA MER1_type 1 69 -120 229 241 89 0 chr17 60611582 60611661 -28892892 - L1MC4 LINE L1 -1345 6697 6612 252 0 0 0 chr17 60611685 60611713 -28892840 + (TG)n Simple_repeat Simple_repeat 2 29 0 355 218 77 0 chr17 60611713 60611791 -28892762 + MIR SINE MIR 119 202 -60 233 152 0 0 chr17 60611795 60611828 -28892725 - MER5A DNA MER1_type -1 188 156 2961 171 137 82 chr17 60612141 60612985 -28891568 + MER21A LTR ERV1 24 914 -17 235 221 118 15 chr17 60613007 60613075 -28891478 - L3 LINE CR1 -123 1454 1380 321 344 8 38 chr17 60613097 60613228 -28891325 + MIR SINE MIR 20 146 -116 606 272 138 9 chr17 60613374 60613598 -28890955 + MIR SINE MIR 8 260 -2 202 400 47 21 chr17 60613690 60613925 -28890628 - L2 LINE L2 -634 2680 2440 872 116 0 68 chr17 60613925 60614072 -28890481 + FLAM_C SINE Alu 1 137 -6 190 231 77 39 chr17 60614180 60614232 -28890321 + L2 LINE L2 3217 3270 -2 314 128 20 118 chr17 60614470 60614572 -28889981 - MER20 DNA MER1_type -1 218 127 313 309 58 37 chr17 60614772 60614963 -28889590 + MIR3 SINE MIR 4 198 -10 310 286 80 123 chr17 60615492 60616002 -28888551 + L1M2 LINE L1 468 955 -5894 356 242 137 0 chr17 60616394 60616518 -28888035 + Charlie4 DNA MER1_type 1818 1958 -3 186 244 139 17 chr17 60616781 60616896 -28887657 + MIR SINE MIR 119 247 -15 1843 189 15 0 chr17 60618311 60618654 -28885899 - MER7A DNA MER2_type 0 346 1 452 288 14 14 chr17 60619015 60619230 -28885323 + L1MEd LINE L1 895 1109 -5010 2161 197 21 26 chr17 60619475 60620009 -28884544 + L1ME LINE L1 5275 5805 -361 216 0 0 0 chr17 60620009 60620033 -28884520 + (TG)n Simple_repeat Simple_repeat 2 25 0 1855 248 45 49 chr17 60620033 60620877 -28883676 + L1MC4 LINE L1 6705 7545 -497 616 280 52 32 chr17 60620978 60621321 -28883232 + L1MC4 LINE L1 7693 8042 0 507 292 71 22 chr17 60621328 60621923 -28882630 + L1MEd LINE L1 2193 2816 -3313 294 213 25 12 chr17 60622016 60622096 -28882457 + LTR33A LTR ERVL 442 522 -1 296 300 70 24 chr17 60622463 60622876 -28881677 + L1MB8 LINE L1 4902 5333 -813 310 266 198 24 chr17 60622901 60623349 -28881204 + L1MB8 LINE L1 5382 5898 -280 24 53 0 0 chr17 60623453 60623491 -28881062 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr17 60623575 60623603 -28880950 + AT_rich Low_complexity Low_complexity 1 28 0 1824 184 115 80 chr17 60623772 60624295 -28880258 - MER44D DNA MER2_type -9 596 1 237 325 49 8 chr17 60624499 60624622 -28879931 + MIR SINE MIR 94 221 -41 872 138 0 0 chr17 60624757 60624887 -28879666 + AluSg/x SINE Alu 152 281 -31 198 0 0 0 chr17 60624887 60624909 -28879644 + (CA)n Simple_repeat Simple_repeat 1 22 0 610 314 64 10 chr17 60625055 60625259 -28879294 - MIR SINE MIR -20 242 28 278 193 61 18 chr17 60625724 60625805 -28878748 - MIR3 SINE MIR -46 162 76 466 291 144 22 chr17 60626455 60626733 -28877820 + L2 LINE L2 2446 2757 -557 4414 136 9 46 chr17 60677032 60677923 -28826630 - L1P LINE L1 -2213 3933 3076 4066 88 74 2 chr17 60677918 60678486 -28826067 + L1PA8 LINE L1 5392 6000 -172 * 1193 230 47 61 chr17 60678687 60678941 -28825612 + MER44D DNA MER2_type 1 257 -2234 1339 141 103 0 chr17 60678941 60679154 -28825399 + MER46A DNA MER2_type 2 236 0 1193 230 47 61 chr17 60679154 60679243 -28825310 + MER44D DNA MER2_type 257 609 0 198 156 0 0 chr17 60679274 60679319 -28825234 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 535 298 62 25 chr17 60680192 60680467 -28824086 - L2 LINE L2 -8 3305 3021 203 125 0 42 chr17 60681347 60681395 -28823158 + (TTATA)n Simple_repeat Simple_repeat 2 47 0 446 361 16 25 chr17 60681482 60681766 -28822787 + L2 LINE L2 2730 3010 -303 1225 157 3 95 chr17 60684781 60685075 -28819478 - L1MB8 LINE L1 0 6178 5912 239 328 50 8 chr17 60686553 60686672 -28817881 - L2 LINE L2 -2 3311 3188 2327 197 14 14 chr17 60687579 60688091 -28816462 + L1MB8 LINE L1 4743 5254 -892 1594 217 22 56 chr17 60688097 60688457 -28816096 - MLT1A1 LTR MaLR -17 348 1 4171 181 52 30 chr17 60688460 60689365 -28815188 + L1MB8 LINE L1 5254 6178 0 415 274 102 30 chr17 60689377 60689574 -28814979 - MIR SINE MIR -3 259 49 1703 172 68 101 chr17 60690265 60690748 -28813805 - MLT1C LTR MaLR 0 467 1 269 279 34 11 chr17 60691315 60691360 -28813193 + MIR SINE MIR 29 71 -152 1869 166 10 7 chr17 60691360 60691667 -28812886 - AluSx SINE Alu -4 308 1 269 279 34 11 chr17 60691667 60691743 -28812810 + MIR SINE MIR 71 153 -70 288 0 0 0 chr17 60691747 60691779 -28812774 + (CA)n Simple_repeat Simple_repeat 2 33 0 194 327 0 0 chr17 60691885 60691937 -28812616 + MIR SINE MIR 94 145 -117 614 220 34 36 chr17 60692139 60692317 -28812236 - MER5B DNA MER1_type -9 169 5 225 345 23 0 chr17 60693477 60693564 -28810989 + MIR SINE MIR 60 148 -60 2169 100 19 13 chr17 60693856 60694165 -28810388 + AluY SINE Alu 1 311 0 213 293 85 12 chr17 60694277 60694359 -28810194 + L2 LINE L2 3193 3280 -33 238 323 20 20 chr17 60695071 60695170 -28809383 - MIR3 SINE MIR -2 206 108 767 220 62 6 chr17 60695467 60695644 -28808909 + MER5A DNA MER1_type 2 188 -1 1482 101 14 19 chr17 60696117 60696324 -28808229 - L1PA10 LINE L1 -9 6159 5954 1954 199 50 18 chr17 60696766 60697202 -28807351 + MLT1C LTR MaLR 1 450 -17 383 381 108 11 chr17 60697496 60697877 -28806676 - MLT1K LTR MaLR -67 521 104 234 373 56 30 chr17 60698994 60699262 -28805291 - L2 LINE L2 -388 2926 2652 1817 96 43 3 chr17 60699897 60700179 -28804374 + AluSp SINE Alu 19 311 -2 447 19 0 0 chr17 60700953 60701005 -28803548 + (TG)n Simple_repeat Simple_repeat 2 53 0 290 253 66 33 chr17 60701081 60701172 -28803381 + MIR3 SINE MIR 109 202 -6 289 311 96 48 chr17 60701336 60701648 -28802905 - L2 LINE L2 -11 3302 2976 275 355 45 0 chr17 60701812 60701922 -28802631 - L3 LINE CR1 -3 1574 1460 507 252 16 8 chr17 60702011 60702138 -28802415 + L2 LINE L2 3182 3309 -4 491 327 137 5 chr17 60702140 60702345 -28802208 - L3 LINE CR1 -210 1367 1136 1430 162 60 39 chr17 60702374 60702707 -28801846 + THE1C LTR MaLR 1 340 -35 896 189 24 122 chr17 60702725 60702979 -28801574 - MLT2D LTR ERVL -118 296 80 1916 132 44 7 chr17 60702979 60703275 -28801278 - AluSg SINE Alu -3 307 1 896 189 24 122 chr17 60703275 60703348 -28801205 - MLT2D LTR ERVL -334 80 1 230 263 48 48 chr17 60704135 60704321 -28800232 + L1ME LINE L1 707 892 -5178 284 186 0 17 chr17 60704339 60704398 -28800155 + L1M4 LINE L1 3510 3567 -2579 2229 115 3 6 chr17 60704407 60704719 -28799834 + AluSq SINE Alu 1 311 -2 402 233 33 33 chr17 60705978 60706068 -28798485 - L2 LINE L2 -37 3276 3187 434 297 55 28 chr17 60708930 60709075 -28795478 - MIR SINE MIR -80 182 34 378 264 92 46 chr17 60709615 60709789 -28794764 + MLT1J2 LTR MaLR 73 254 -196 1051 240 113 43 chr17 60710001 60710489 -28794064 + MLT1H LTR MaLR 18 539 -10 596 224 51 30 chr17 60710820 60711057 -28793496 + L1M4 LINE L1 3627 3868 -2278 21 71 0 0 chr17 60711070 60711112 -28793441 + AT_rich Low_complexity Low_complexity 1 42 0 585 198 9 0 chr17 60711193 60711309 -28793244 - ORSL DNA AcHobo -157 118 2 253 193 0 35 chr17 60711376 60711433 -28793120 + MIR SINE MIR 123 177 -85 213 245 20 0 chr17 60712115 60712164 -28792389 - MER5B DNA MER1_type -125 53 4 235 301 0 0 chr17 60713181 60713284 -28791269 - L1ME LINE L1 -286 5884 5782 384 288 91 43 chr17 60713655 60713865 -28790688 - L1ME LINE L1 -387 5783 5584 1722 192 10 47 chr17 60713865 60714250 -28790303 + MLT1A2 LTR MaLR 4 374 0 384 288 91 43 chr17 60714250 60714491 -28790062 - L1ME LINE L1 -586 5584 5289 25 51 0 0 chr17 60714516 60714555 -28789998 + AT_rich Low_complexity Low_complexity 1 39 0 348 208 39 34 chr17 60714556 60714734 -28789819 + (TA)n Simple_repeat Simple_repeat 2 180 0 23 78 0 0 chr17 60714807 60714858 -28789695 + AT_rich Low_complexity Low_complexity 1 51 0 1049 261 155 37 chr17 60715010 60715817 -28788736 - L1ME3A LINE L1 -14 6156 5255 187 250 35 12 chr17 60715826 60715998 -28788555 + (TA)n Simple_repeat Simple_repeat 2 177 0 207 0 0 0 chr17 60716005 60716028 -28788525 + (TG)n Simple_repeat Simple_repeat 2 24 0 986 265 122 40 chr17 60716178 60716466 -28788087 - L1ME3A LINE L1 -13 6157 5894 1975 188 11 3 chr17 60716466 60716828 -28787725 - MLT1A1 LTR MaLR 0 365 1 986 265 122 40 chr17 60716828 60717113 -28787440 - L1ME3A LINE L1 -276 5894 5537 233 317 10 30 chr17 60717135 60717236 -28787317 + MLT1H LTR MaLR 432 530 -19 642 273 56 65 chr17 60717266 60717922 -28786631 - L1ME3A LINE L1 -2323 3823 3174 934 244 20 26 chr17 60718145 60718454 -28786099 - MER114 LTR ERV -273 375 67 1777 156 19 49 chr17 60718454 60718518 -28786035 - L1MA9 LINE L1 0 6312 6248 2266 103 3 3 chr17 60718518 60718819 -28785734 + AluSg SINE Alu 1 301 -9 1777 156 19 49 chr17 60718819 60719164 -28785389 - L1MA9 LINE L1 -64 6248 5915 934 244 20 26 chr17 60719164 60719198 -28785355 - MER114 LTR ERV -581 67 34 283 221 29 19 chr17 60719198 60719302 -28785251 - L1ME3A LINE L1 -1203 4943 4839 2231 109 3 0 chr17 60719311 60719622 -28784931 - AluSx SINE Alu 0 312 1 1070 219 55 43 chr17 60719653 60720145 -28784408 - L1ME3A LINE L1 -1423 4723 4226 258 32 0 0 chr17 60720164 60720195 -28784358 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 234 261 29 0 chr17 60720195 60720264 -28784289 - L1ME3A LINE L1 -1995 4151 4081 610 285 12 4 chr17 60720297 60720574 -28783979 + L1ME LINE L1 4969 5249 -897 22161 86 7 16 chr17 60720640 60723982 -28780571 + L1PA6 LINE L1 598 3908 -2238 6977 61 1 9 chr17 60723988 60725178 -28779375 + L1PA6 LINE L1 4966 6149 -5 953 219 102 7 chr17 60725180 60725463 -28779090 + L1ME LINE L1 5326 5635 -527 636 307 5 0 chr17 60725536 60725725 -28778828 + HERVL LTR ERVL 4626 4815 -839 476 216 45 22 chr17 60726119 60726253 -28778300 + LTR45 LTR ERV1 389 525 0 714 288 42 0 chr17 60726260 60726475 -28778078 + HERVL LTR ERVL 4880 5103 -661 222 37 0 0 chr17 60727068 60727095 -28777458 + (TAA)n Simple_repeat Simple_repeat 2 28 0 441 0 0 0 chr17 60727176 60727225 -28777328 + (CA)n Simple_repeat Simple_repeat 1 49 0 2639 116 20 2 chr17 60727238 60727645 -28776908 - L1PB1 LINE L1 -1 6150 5737 1915 148 53 34 chr17 60727645 60728002 -28776551 + THE1B LTR MaLR 1 364 0 11199 98 1 4 chr17 60728002 60728706 -28775847 + THE1B-int LTR MaLR 1 706 -874 4072 82 30 0 chr17 60728706 60729269 -28775284 + LTR19B LTR ERV1 1 580 0 11199 98 1 4 chr17 60729269 60730150 -28774403 + THE1B-int LTR MaLR 706 1580 0 2024 118 52 32 chr17 60730150 60730498 -28774055 + THE1B LTR MaLR 1 355 -9 351 78 5 5 chr17 60730498 60730563 -28773990 - L1PB1 LINE L1 -416 5735 5671 900 168 67 6 chr17 60730567 60730746 -28773807 - L1PA15 LINE L1 -13 6152 5963 797 310 93 31 chr17 60730825 60730914 -28773639 + L2 LINE L2 2827 2909 -404 1702 152 10 14 chr17 60730914 60731204 -28773349 - AluSx SINE Alu -11 301 13 797 310 93 31 chr17 60731204 60731566 -28772987 + L2 LINE L2 2909 3306 -7 663 299 66 34 chr17 60731929 60732518 -28772035 + L1MC4a LINE L1 5297 5817 -304 2039 235 101 29 chr17 60732714 60733695 -28770858 + L1ME3 LINE L1 5106 6156 -6 22 70 0 0 chr17 60733975 60734018 -28770535 + AT_rich Low_complexity Low_complexity 1 43 0 258 286 0 29 chr17 60734318 60734388 -28770165 - L3 LINE CR1 -19 1558 1491 405 58 0 0 chr17 60734545 60734597 -28769956 + (TG)n Simple_repeat Simple_repeat 2 53 0 222 261 0 29 chr17 60736355 60736424 -28768129 + CT-rich Low_complexity Low_complexity 3 69 0 1677 242 40 35 chr17 60736729 60737274 -28767279 - MER74B LTR ERVL -6 616 69 2226 102 0 0 chr17 60737398 60737715 -28766838 + AluSq SINE Alu 1 317 0 265 312 48 12 chr17 60738620 60738870 -28765683 - L1M4 LINE L1 -3102 3044 2786 1307 116 6 0 chr17 60739134 60739315 -28765238 + AluSc SINE Alu 114 295 -14 234 0 0 0 chr17 60739761 60739787 -28764766 + (T)n Simple_repeat Simple_repeat 1 26 0 250 86 0 0 chr17 60739813 60739848 -28764705 - Charlie8 DNA MER1_type -989 1428 1394 346 258 68 85 chr17 60739907 60740306 -28764247 + HAL1b LINE L1 464 855 -493 230 274 38 38 chr17 60740539 60740645 -28763908 + HAL1b LINE L1 1197 1302 -46 1349 237 22 3 chr17 60742008 60742329 -28762224 - MER58B DNA MER1_type 0 341 15 370 239 75 109 chr17 60742555 60742794 -28761759 - L3 LINE CR1 -124 1453 1223 423 298 62 31 chr17 60743374 60743535 -28761018 + MIR SINE MIR 4 169 -93 401 272 173 16 chr17 60744053 60744244 -28760309 - MIR SINE MIR -5 257 37 871 234 37 40 chr17 60744633 60744906 -28759647 + MLT1C LTR MaLR 53 324 -143 23 33 0 0 chr17 60745015 60745045 -28759508 + AT_rich Low_complexity Low_complexity 1 30 0 233 248 99 12 chr17 60745103 60745264 -28759289 + L1ME4a LINE L1 5943 6117 -4 320 302 76 23 chr17 60745995 60746167 -28758386 + L3 LINE CR1 1286 1466 -111 257 375 42 46 chr17 60746226 60746345 -28758208 + L2 LINE L2 2369 2487 -827 1711 229 8 0 chr17 60746345 60746707 -28757846 + MLT1A1 LTR MaLR 1 365 0 257 375 42 46 chr17 60746707 60746894 -28757659 + L2 LINE L2 2487 2674 -640 225 125 25 0 chr17 60746937 60746977 -28757576 + L2 LINE L2 3273 3313 0 927 230 0 0 chr17 60747169 60747356 -28757197 - MER5A DNA MER1_type -1 188 2 210 71 0 0 chr17 60747544 60747572 -28756981 + (T)n Simple_repeat Simple_repeat 1 28 0 542 314 57 0 chr17 60747704 60747884 -28756669 + MIR SINE MIR 45 234 -28 2125 128 6 29 chr17 60748488 60748831 -28755722 + THE1B LTR MaLR 1 335 -29 382 274 44 9 chr17 60748844 60748957 -28755596 + L1MCa LINE L1 2253 2404 -4057 810 281 77 8 chr17 60749207 60749615 -28754938 + L1MCa LINE L1 2411 2807 -3619 2192 240 178 19 chr17 60749615 60750261 -28754292 - L1M4b LINE L1 -5781 1078 330 2534 172 12 21 chr17 60750262 60750692 -28753861 - MSTB LTR MaLR 0 426 1 868 101 0 0 chr17 60750692 60750811 -28753742 - MSTB-int LTR MaLR 0 1651 1533 671 63 0 0 chr17 60750814 60750893 -28753660 + AluY SINE Alu 2 80 -231 5806 193 13 8 chr17 60751008 60751984 -28752569 - MSTB-int LTR MaLR -113 1538 554 2217 120 3 0 chr17 60751984 60752285 -28752268 - AluSq SINE Alu -11 302 1 5806 193 13 8 chr17 60752285 60752359 -28752194 - MSTB-int LTR MaLR -1097 554 482 367 73 73 0 chr17 60752363 60752418 -28752135 - MADE1 DNA Mariner -21 59 1 680 81 0 0 chr17 60752418 60752504 -28752049 - MSTA LTR MaLR -53 375 290 523 202 35 0 chr17 60752508 60752622 -28751931 - L1M4b LINE L1 -6646 213 96 192 125 0 0 chr17 60752624 60752656 -28751897 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 456 262 141 0 chr17 60753953 60754102 -28750451 - MER58C DNA MER1_type 0 215 46 208 383 35 26 chr17 60754106 60754221 -28750332 - MIR3 SINE MIR -41 167 52 717 167 14 21 chr17 60754502 60754646 -28749907 + MLT1E3 LTR MaLR 482 624 0 10309 102 6 2 chr17 60754791 60756275 -28748278 + L1M LINE L1 3917 5406 -757 752 284 37 49 chr17 60756339 60756613 -28747940 + L1ME2 LINE L1 5316 5587 -575 2288 103 0 7 chr17 60756613 60756914 -28747639 - AluSx SINE Alu -13 299 1 752 284 37 49 chr17 60756914 60756967 -28747586 + L1ME2 LINE L1 5587 5639 -523 328 225 88 0 chr17 60756994 60757074 -28747479 + L1ME2 LINE L1 6004 6090 -74 382 269 111 23 chr17 60757080 60757251 -28747302 - L2 LINE L2 -657 2657 2472 234 289 133 44 chr17 60757259 60757553 -28747000 - L1M4 LINE L1 -1137 5009 4690 681 239 80 35 chr17 60757592 60757818 -28746735 - MIR SINE MIR -1 261 26 234 274 0 27 chr17 60758077 60758150 -28746403 + CT-rich Low_complexity Low_complexity 3 73 0 1716 237 162 24 chr17 60758212 60758849 -28745704 - L1MC4a LINE L1 0 7808 7084 351 0 0 0 chr17 60758857 60758896 -28745657 + (TTA)n Simple_repeat Simple_repeat 2 40 0 30204 118 18 55 chr17 60758896 60765291 -28739262 - L1PA8 LINE L1 -16 6156 12 1601 240 98 37 chr17 60765842 60766434 -28738119 - L1ME2 LINE L1 -20 6144 5517 2018 139 3 3 chr17 60766435 60766738 -28737815 - AluSp SINE Alu -10 303 1 2211 106 3 0 chr17 60767646 60767938 -28736615 + AluSp SINE Alu 1 293 -20 1793 170 52 66 chr17 60767981 60768444 -28736109 - L1MA6 LINE L1 -221 6079 5642 255 143 0 41 chr17 60768425 60768474 -28736079 + L1MA7 LINE L1 6245 6291 0 * 447 270 45 62 chr17 60768498 60768676 -28735877 + MIR SINE MIR 2 176 -86 226 326 11 22 chr17 60768708 60768797 -28735756 - L2 LINE L2 -8 3264 3177 333 269 56 0 chr17 60769250 60769358 -28735195 - MIR3 SINE MIR 0 208 95 253 272 61 115 chr17 60770279 60770540 -28734013 - MLT1J LTR MaLR -20 491 245 1516 243 53 14 chr17 60770764 60771179 -28733374 + LTR47B LTR ERVL 1 431 -12 867 167 8 0 chr17 60771576 60771708 -28732845 + FLAM_C SINE Alu 1 133 0 278 288 18 63 chr17 60772238 60772349 -28732204 - MIR SINE MIR -84 124 19 308 302 52 0 chr17 60772437 60772533 -28732020 - MIR SINE MIR -74 188 88 5599 176 41 10 chr17 60772815 60774798 -28729755 - L1PA16 LINE L1 -9 6157 4126 183 80 0 0 chr17 60774818 60774843 -28729710 + (CTG)n Simple_repeat Simple_repeat 2 26 0 914 269 52 40 chr17 60774853 60775202 -28729351 + L2 LINE L2 1931 2283 -1031 523 240 103 7 chr17 60775279 60775425 -28729128 - MER46C DNA MER2_type -97 241 82 664 255 43 29 chr17 60775460 60775668 -28728885 + L2 LINE L2 3103 3313 0 324 333 13 47 chr17 60775833 60775983 -28728570 - MIR3 SINE MIR -20 188 44 32 67 0 0 chr17 60776305 60776365 -28728188 + AT_rich Low_complexity Low_complexity 1 60 0 223 91 23 23 chr17 60776401 60776445 -28728108 + (TA)n Simple_repeat Simple_repeat 1 44 0 297 330 0 0 chr17 60776463 60776566 -28727987 + MIR SINE MIR 59 161 -101 1021 266 8 0 chr17 60776683 60776920 -28727633 + MIR SINE MIR 3 241 -21 274 256 44 44 chr17 60778441 60778531 -28726022 + L2 LINE L2 3182 3271 -1 1086 284 48 43 chr17 60778651 60779049 -28725504 + MLT1J2 LTR MaLR 5 404 -46 2304 159 6 0 chr17 60779115 60779474 -28725079 - MER46B DNA MER2_type 0 236 1 31 44 0 0 chr17 60779813 60779858 -28724695 + AT_rich Low_complexity Low_complexity 1 45 0 1379 222 21 0 chr17 60779859 60780143 -28724410 + AluJo SINE Alu 1 290 -22 303 317 0 0 chr17 60780607 60780730 -28723823 + A-rich Low_complexity Low_complexity 1 123 0 367 337 107 19 chr17 60781351 60781556 -28722997 - MIR SINE MIR -3 259 37 336 340 106 23 chr17 60782476 60782741 -28721812 + L2 LINE L2 2972 3258 -14 204 373 93 8 chr17 60783001 60783119 -28721434 + L2 LINE L2 3052 3179 -93 324 235 230 68 chr17 60783672 60783853 -28720700 + MIR3 SINE MIR 41 246 -16 500 311 24 0 chr17 60784658 60784825 -28719728 + MER5B DNA MER1_type 7 177 -1 274 323 47 24 chr17 60784916 60785043 -28719510 - L2 LINE L2 -2 3270 3141 1302 131 157 11 chr17 60785087 60785181 -28719372 + L1MA9 LINE L1 5999 6078 -234 1667 177 35 30 chr17 60785181 60785554 -28718999 - THE1C LTR MaLR 0 375 1 1302 131 157 11 chr17 60785554 60785733 -28718820 + L1MA9 LINE L1 6078 6312 0 180 0 0 0 chr17 60786241 60786261 -28718292 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 824 245 0 0 chr17 60786264 60786411 -28718142 - FRAM SINE Alu -30 146 1 3252 264 14 32 chr17 60786493 60787362 -28717191 + L1PA15 LINE L1 1 853 -5934 384 324 71 8 chr17 60787766 60788019 -28716534 - LTR16A1 LTR ERVL -21 436 168 5135 156 50 30 chr17 60788243 60788344 -28716209 - L1MA10 LINE L1 -7 6327 6229 2740 166 2 47 chr17 60788344 60788831 -28715722 + LTR32 LTR ERVL 4 468 -3 5135 156 50 30 chr17 60788831 60790158 -28714395 - L1MA10 LINE L1 -105 6229 4865 290 279 91 35 chr17 60790158 60790338 -28714215 - MIR SINE MIR -50 212 30 1584 162 0 32 chr17 60790489 60790742 -28713811 + AluJb SINE Alu 21 265 -47 2690 107 0 50 chr17 60790804 60791187 -28713366 - THE1B LTR MaLR 0 364 1 5020 215 17 12 chr17 60792071 60793861 -28710692 + L1PA15 LINE L1 1434 3240 -3557 279 215 15 0 chr17 60793862 60793927 -28710626 + MER52A LTR ERV1 1 66 -1689 4396 189 90 38 chr17 60794652 60795668 -28708885 + MER52A LTR ERV1 46 1192 -563 1257 205 81 30 chr17 60795667 60795964 -28708589 + MER52A LTR ERV1 1404 1715 -40 * 12676 206 20 1 chr17 60795984 60799572 -28704981 + L1PA15 LINE L1 3238 6814 -2 3600 132 15 0 chr17 60799036 60799574 -28704979 + L1PA15 LINE L1 6271 6816 0 185 67 0 67 chr17 60800103 60800133 -28704420 - MIR SINE MIR -145 117 90 236 254 246 29 chr17 60800154 60800292 -28704261 - MIR SINE MIR -9 253 86 2471 198 60 35 chr17 60800366 60800962 -28703591 - L1MC1 LINE L1 -5 7738 6133 195 298 0 0 chr17 60801189 60801236 -28703317 - MIR SINE MIR -8 254 208 523 296 17 29 chr17 60802030 60802202 -28702351 - MIR SINE MIR -74 188 19 922 226 47 38 chr17 60802866 60803078 -28701475 - MER20 DNA MER1_type -2 217 4 372 324 59 12 chr17 60803175 60803345 -28701208 - MIR SINE MIR -38 224 47 469 246 0 25 chr17 60803514 60803636 -28700917 - MIR SINE MIR -113 149 31 24 32 0 0 chr17 60804985 60805016 -28699537 + AT_rich Low_complexity Low_complexity 1 31 0 212 282 155 19 chr17 60805142 60805245 -28699308 - MIR SINE MIR -126 136 20 1846 68 0 0 chr17 60805595 60805856 -28698697 + AluY SINE Alu 72 332 0 187 304 123 36 chr17 60805992 60806130 -28698423 + MIR SINE MIR 85 234 -28 2011 133 105 13 chr17 60806509 60806891 -28697662 - MSTA LTR MaLR -11 417 1 430 305 13 13 chr17 60807599 60807750 -28696803 - MIR SINE MIR -65 197 47 447 301 126 12 chr17 60807791 60807978 -28696575 - MIR SINE MIR -62 146 2 1823 78 41 0 chr17 60808578 60808820 -28695733 - L1PA12 LINE L1 0 6168 5917 213 324 7 76 chr17 60808888 60809033 -28695520 + MIR SINE MIR 17 151 -111 221 252 98 105 chr17 60809121 60809264 -28695289 - MIR SINE MIR -68 194 53 1853 120 0 4 chr17 60809265 60809523 -28695030 + AluSx SINE Alu 35 291 -21 181 300 120 0 chr17 60809849 60809899 -28694654 - L2 LINE L2 -16 3256 3201 360 277 99 62 chr17 60809938 60810235 -28694318 + MLT1J LTR MaLR 8 366 -145 1113 169 13 89 chr17 60810235 60810472 -28694081 + MER20 DNA MER1_type 1 219 0 360 277 99 62 chr17 60810472 60810599 -28693954 + MLT1J LTR MaLR 366 487 -24 187 352 77 11 chr17 60810645 60810736 -28693817 - MIR SINE MIR -147 115 19 2394 156 71 58 chr17 60810887 60811368 -28693185 + L1M3 LINE L1 4759 5281 -887 3961 130 25 36 chr17 60811368 60812000 -28692553 + L1PA16 LINE L1 5533 6157 -9 2394 156 71 58 chr17 60812000 60812302 -28692251 + L1M3 LINE L1 5281 5577 -591 304 355 16 0 chr17 60812309 60812433 -28692120 + L2 LINE L2 2575 2700 -614 1894 171 36 18 chr17 60812434 60812826 -28691727 - L1MA9 LINE L1 -1 6311 5913 248 299 45 85 chr17 60812847 60813071 -28691482 + HAL1 LINE L1 3 217 -2290 902 283 135 51 chr17 60813322 60814180 -28690373 + HAL1 LINE L1 707 1636 -871 324 274 215 0 chr17 60814234 60814369 -28690184 + HAL1 LINE L1 1728 1891 -616 286 229 12 24 chr17 60814503 60814586 -28689967 + HAL1 LINE L1 2078 2159 -348 252 244 78 0 chr17 60814920 60815010 -28689543 + HAL1 LINE L1 2240 2336 -171 533 276 113 25 chr17 60815506 60815709 -28688844 + MIR SINE MIR 23 243 -19 2594 144 186 2 chr17 60816284 60816729 -28687824 - MER1A DNA MER1_type 0 527 1 222 293 158 12 chr17 60816969 60817051 -28687502 - L2 LINE L2 -2917 397 304 22 35 0 0 chr17 60818455 60818484 -28686069 + AT_rich Low_complexity Low_complexity 1 29 0 1455 295 20 5 chr17 60819016 60819406 -28685147 - LTR16C LTR ERVL -8 483 88 864 363 29 24 chr17 60819512 60820093 -28684460 - ERVL LTR ERVL -434 5330 4747 400 393 49 0 chr17 60820153 60820418 -28684135 - ERVL LTR ERVL -875 4610 4333 677 177 16 8 chr17 60820425 60820549 -28684004 - MLT1A1 LTR MaLR 0 365 241 189 175 0 0 chr17 60820567 60820607 -28683946 + T-rich Low_complexity Low_complexity 5 44 0 574 113 155 0 chr17 60820644 60820741 -28683812 - L1P3 LINE L1 -5659 802 691 228 164 0 91 chr17 60820741 60820796 -28683757 - MLT1A1 LTR MaLR -288 77 28 * 871 188 134 0 chr17 60820794 60820996 -28683557 - MLT1A1 LTR MaLR -136 229 1 644 390 6 11 chr17 60821058 60821409 -28683144 - ERVL LTR ERVL -1395 4259 3911 287 279 125 22 chr17 60821584 60821720 -28682833 - LTR16C LTR ERVL -79 412 263 891 230 56 4 chr17 60821730 60822000 -28682553 + AluSc SINE Alu 1 284 -15 1197 159 14 5 chr17 60822113 60822321 -28682232 + AluSg/x SINE Alu 88 297 -15 246 299 30 0 chr17 60822328 60822395 -28682158 - LTR16C LTR ERVL -238 253 185 23 0 0 0 chr17 60823018 60823041 -28681512 + AT_rich Low_complexity Low_complexity 1 23 0 2753 118 11 3 chr17 60823558 60823930 -28680623 - THE1C LTR MaLR 0 375 1 261 0 0 0 chr17 60824155 60824184 -28680369 + (TG)n Simple_repeat Simple_repeat 2 30 0 436 364 22 26 chr17 60826203 60826431 -28678122 - MIR SINE MIR -10 252 26 990 275 0 0 chr17 60826594 60826805 -28677748 - MER58A DNA MER1_type -2 222 12 520 268 106 38 chr17 60827185 60827286 -28677267 - MIR SINE MIR 0 262 169 2427 78 0 13 chr17 60827286 60827592 -28676961 - AluY SINE Alu -9 302 1 520 268 106 38 chr17 60827592 60827725 -28676828 - MIR SINE MIR -93 169 12 427 313 23 0 chr17 60829546 60829674 -28674879 + MER94 DNA DNA 4 134 0 2287 79 4 0 chr17 60829739 60830071 -28674482 - AluY SINE Alu 0 333 1 190 114 23 23 chr17 60830454 60830481 -28674072 + (TA)n Simple_repeat Simple_repeat 2 31 -14 2173 108 0 10 chr17 60830481 60830778 -28673775 - AluSp SINE Alu -18 295 2 190 114 23 23 chr17 60830778 60830794 -28673759 + (TA)n Simple_repeat Simple_repeat 30 45 0 432 0 0 0 chr17 60831683 60831731 -28672822 + (TG)n Simple_repeat Simple_repeat 2 49 0 185 333 0 91 chr17 60833114 60833213 -28671340 - MIR SINE MIR -161 101 12 2089 130 0 17 chr17 60833417 60833718 -28670835 - AluSx SINE Alu -12 300 5 26 30 0 0 chr17 60835333 60835366 -28669187 + AT_rich Low_complexity Low_complexity 1 33 0 366 290 45 19 chr17 60835512 60835667 -28668886 - MIR SINE MIR -38 224 66 2302 104 0 19 chr17 60835882 60836200 -28668353 + AluSp SINE Alu 1 312 -1 195 347 28 0 chr17 60836332 60836404 -28668149 - MIR SINE MIR -83 179 106 272 282 109 102 chr17 60836571 60837050 -28667503 - L2 LINE L2 -1 3312 2831 622 180 7 7 chr17 60837270 60837420 -28667133 + (TG)n Simple_repeat Simple_repeat 2 151 0 764 333 119 7 chr17 60837465 60837912 -28666641 - L2 LINE L2 -785 2529 2033 326 203 0 0 chr17 60837943 60838002 -28666551 + MER3 DNA MER1_type 7 65 -144 600 298 29 63 chr17 60838304 60838620 -28665933 - L2 LINE L2 0 3313 3009 185 314 36 21 chr17 60838647 60838787 -28665766 - L2 LINE L2 -1650 1664 1523 515 362 88 23 chr17 60838797 60839283 -28665270 - L2 LINE L2 -2349 965 448 2171 135 67 14 chr17 60839290 60839646 -28664907 - THE1C LTR MaLR 0 375 1 4269 156 27 58 chr17 60839893 60840049 -28664504 - L1MA9 LINE L1 -1 6311 6152 1827 165 69 39 chr17 60840049 60840413 -28664140 - THE1C LTR MaLR 0 375 1 9919 132 55 16 chr17 60840413 60841931 -28662622 - THE1C-int LTR MaLR 0 1580 3 1899 183 38 30 chr17 60841933 60842305 -28662248 - THE1C LTR MaLR 0 375 1 4269 156 27 58 chr17 60842305 60843212 -28661341 - L1MA9 LINE L1 -160 6152 5176 1282 185 26 55 chr17 60844700 60845008 -28659545 + AluJb SINE Alu 1 299 -13 906 308 86 46 chr17 60845084 60845668 -28658885 + MLT1L LTR MaLR 7 613 -2 233 357 47 23 chr17 60845671 60845800 -28658753 - MIR SINE MIR -110 152 21 243 79 0 0 chr17 60846003 60846041 -28658512 + (A)n Simple_repeat Simple_repeat 1 38 0 5513 151 20 30 chr17 60846107 60847135 -28657418 + L1MA8 LINE L1 5273 6290 -1 330 395 76 35 chr17 60847298 60847642 -28656911 + L2 LINE L2 2915 3272 0 2616 109 22 3 chr17 60847733 60848090 -28656463 - THE1B LTR MaLR 0 364 1 542 285 146 56 chr17 60848120 60848823 -28655730 + L2 LINE L2 2543 3313 0 244 263 53 68 chr17 60849742 60849875 -28654678 + MLT1K LTR MaLR 450 580 -8 568 337 50 39 chr17 60849904 60850361 -28654192 - L2 LINE L2 -917 2397 1936 459 289 81 13 chr17 60850368 60850517 -28654036 - MLT1I LTR MaLR -19 390 232 227 194 90 60 chr17 60850708 60850775 -28653778 - MLT1J2 LTR MaLR -314 136 68 261 344 0 11 chr17 60850828 60850918 -28653635 - L2 LINE L2 -1375 1939 1851 329 283 34 57 chr17 60850925 60851102 -28653451 - MIR SINE MIR -34 228 56 264 250 29 29 chr17 60854433 60854537 -28650016 + MER5A DNA MER1_type 1 104 -85 2323 117 35 46 chr17 60854653 60855021 -28649532 - THE1B LTR MaLR 0 364 1 11893 107 8 16 chr17 60855021 60856614 -28647939 - THE1B-int LTR MaLR 0 1580 1 2324 112 50 31 chr17 60856614 60856971 -28647582 - THE1B LTR MaLR 0 364 1 267 294 54 0 chr17 60857032 60857124 -28647429 + MIR3 SINE MIR 88 184 -24 925 208 6 0 chr17 60857306 60857489 -28647064 - AluJo SINE Alu -11 301 118 297 308 145 0 chr17 60857778 60857950 -28646603 - L2 LINE L2 -5 3308 3112 247 376 223 7 chr17 60858055 60858337 -28646216 - L2 LINE L2 -475 2839 2497 1835 56 4 30 chr17 60858527 60858758 -28645795 - L1PA7 LINE L1 0 6154 5930 3545 49 2 0 chr17 60858758 60859185 -28645368 + L1PA7 LINE L1 5500 5927 -227 225 0 0 0 chr17 60859246 60859271 -28645282 + (T)n Simple_repeat Simple_repeat 1 25 0 1769 124 4 30 chr17 60859393 60859660 -28644893 - AluSq SINE Alu -53 260 1 1582 166 42 18 chr17 60860521 60860804 -28643749 + AluJo SINE Alu 1 290 -22 799 228 242 34 chr17 60861597 60861953 -28642600 - MER69 DNA AcHobo -11 2515 2086 587 111 40 0 chr17 60861956 60862055 -28642498 - L1M4 LINE L1 -3113 3033 2931 * 1158 284 70 49 chr17 60862046 60862795 -28641758 - L1MEd LINE L1 -4862 1257 572 239 290 7 36 chr17 60862850 60862988 -28641565 + (TATATG)n Simple_repeat Simple_repeat 5 138 0 * 336 238 22 39 chr17 60862902 60863083 -28641470 + (TA)n Simple_repeat Simple_repeat 2 179 0 227 156 33 11 chr17 60863103 60863193 -28641360 + (TA)n Simple_repeat Simple_repeat 2 93 0 330 87 0 0 chr17 60863232 60863278 -28641275 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 313 304 52 102 chr17 60863297 60863777 -28640776 - L1MEd LINE L1 -5606 513 58 1620 206 65 6 chr17 60863794 60864115 -28640438 + MER68 LTR ERV1 5 344 -218 394 278 0 0 chr17 60864112 60864202 -28640351 + MER68 LTR ERV1 466 555 -7 * 576 209 108 0 chr17 60864555 60864703 -28639850 + MER103 DNA DNA 3 166 0 44606 38 1 13 chr17 60865153 60871413 -28633140 + L1PA3 LINE L1 9 6192 0 23 33 0 0 chr17 60873918 60873948 -28630605 + AT_rich Low_complexity Low_complexity 1 30 0 382 236 19 75 chr17 60874373 60874479 -28630074 + MER5A DNA MER1_type 83 182 -7 1634 255 81 73 chr17 60875521 60875685 -28628868 - L1ME3 LINE L1 -28 6203 6042 2613 150 44 0 chr17 60875685 60876098 -28628455 - MSTB1 LTR MaLR -1 431 1 1634 255 81 73 chr17 60876098 60877202 -28627351 - L1ME3 LINE L1 -189 6042 4933 2101 132 13 0 chr17 60877202 60877506 -28627047 + AluSx SINE Alu 1 308 -4 1634 255 81 73 chr17 60877506 60877717 -28626836 - L1ME3 LINE L1 -1298 4933 4725 1354 254 61 81 chr17 60877758 60878282 -28626271 - L1ME3 LINE L1 -1455 4760 4212 337 87 0 0 chr17 60878282 60878328 -28626225 + MADE1 DNA Mariner 29 74 -6 1354 254 61 81 chr17 60878328 60878599 -28625954 - L1ME3 LINE L1 -2003 4212 3937 802 226 82 19 chr17 60878590 60878847 -28625706 - L1ME2 LINE L1 -262 5902 5630 * 382 285 137 38 chr17 60878850 60879488 -28625065 - L1ME3 LINE L1 -3863 2392 1684 413 267 53 19 chr17 60879630 60879836 -28624717 - L1ME3 LINE L1 -4936 1460 1248 274 267 70 128 chr17 60880372 60880488 -28624065 - MER5B DNA MER1_type -8 170 66 504 0 0 0 chr17 60880488 60880544 -28624009 + (TTTC)n Simple_repeat Simple_repeat 1 56 0 274 267 70 128 chr17 60880544 60880599 -28623954 - MER5B DNA MER1_type -112 66 9 201 108 0 0 chr17 60880809 60880846 -28623707 + (TG)n Simple_repeat Simple_repeat 2 38 0 2109 137 0 0 chr17 60881970 60882276 -28622277 + AluSx SINE Alu 1 306 -6 549 281 71 86 chr17 60883567 60883799 -28620754 - MLT1I LTR MaLR 0 409 184 1107 226 37 5 chr17 60883799 60884016 -28620537 - MER58A DNA MER1_type 0 224 1 549 281 71 86 chr17 60884016 60884192 -28620361 - MLT1I LTR MaLR -225 184 7 1998 171 22 25 chr17 60884264 60884607 -28619946 + MLT1A1 LTR MaLR 1 344 -21 3092 178 21 43 chr17 60884607 60885131 -28619422 + MLT2B3 LTR ERVL 1 514 -40 333 0 0 0 chr17 60885131 60885168 -28619385 + (TG)n Simple_repeat Simple_repeat 1 37 0 3092 178 21 43 chr17 60885168 60885206 -28619347 + MLT2B3 LTR ERVL 514 551 -3 1998 171 22 25 chr17 60885206 60885225 -28619328 + MLT1A1 LTR MaLR 344 362 -3 326 273 97 67 chr17 60885232 60885397 -28619156 + MIR SINE MIR 47 216 -46 498 308 149 14 chr17 60886016 60886237 -28618316 - MIR SINE MIR -6 256 6 399 320 174 5 chr17 60886557 60886776 -28617777 - MIR SINE MIR 0 262 7 224 234 0 47 chr17 60886776 60886840 -28617713 - MER5B DNA MER1_type -113 65 5 * 231 234 71 26 chr17 60886798 60886902 -28617651 + MIR SINE MIR 43 152 -56 242 304 11 11 chr17 60886940 60887032 -28617521 + MER20B DNA MER1_type 88 179 -604 267 348 62 19 chr17 60887239 60887400 -28617153 + MIR SINE MIR 81 248 -14 292 297 65 39 chr17 60888146 60888301 -28616252 + L1MC2 LINE L1 5671 5829 -345 246 62 0 0 chr17 60888487 60888519 -28616034 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 1446 181 28 50 chr17 60888787 60889108 -28615445 + L1MC2 LINE L1 5881 6194 -150 500 349 70 8 chr17 60890043 60890284 -28614269 + MIR SINE MIR 6 261 -1 474 382 5 11 chr17 60891444 60891630 -28612923 - MIR SINE MIR -70 192 8 225 313 23 47 chr17 60891687 60891815 -28612738 - MIR SINE MIR -71 191 67 249 244 99 76 chr17 60891900 60891956 -28612597 + MIR SINE MIR 119 172 -90 360 0 0 0 chr17 60891956 60891996 -28612557 + (TG)n Simple_repeat Simple_repeat 1 40 0 249 244 99 76 chr17 60891996 60892014 -28612539 + MIR SINE MIR 172 188 -74 403 269 236 5 chr17 60892014 60892226 -28612327 + MIR SINE MIR 2 262 0 249 244 99 76 chr17 60892226 60892281 -28612272 + MIR SINE MIR 188 252 -10 1034 237 9 26 chr17 60892842 60893070 -28611483 + MER58A DNA MER1_type 1 224 0 191 281 47 16 chr17 60893508 60893572 -28610981 - MER5A DNA MER1_type -16 173 108 2505 266 164 38 chr17 60894244 60895619 -28608934 - L2 LINE L2 -222 3091 1545 2093 112 35 0 chr17 60895707 60895992 -28608561 - AluSx SINE Alu -17 295 1 247 346 98 56 chr17 60896936 60897150 -28607403 - L2 LINE L2 -5 3267 3045 1473 209 202 44 chr17 60897411 60897951 -28606602 - MLT1E2 LTR MaLR -1 625 1 228 286 0 0 chr17 60898977 60899033 -28605520 - L2 LINE L2 0 3313 3258 324 287 60 60 chr17 60899639 60899789 -28604764 + MIR SINE MIR 79 228 -34 753 155 17 0 chr17 60900058 60900174 -28604379 + AluJo SINE Alu 19 136 -176 1760 110 45 17 chr17 60900324 60900616 -28603937 + L1MA5A LINE L1 5992 6291 -6 187 286 14 57 chr17 60901292 60901362 -28603191 - L2 LINE L2 -1 3312 3246 423 269 37 15 chr17 60902304 60902438 -28602115 - MIR SINE MIR -2 260 124 651 350 52 37 chr17 60902875 60903224 -28601329 + L2 LINE L2 2901 3254 -18 435 327 5 44 chr17 60903363 60903545 -28601008 - MIR3 SINE MIR -13 195 20 240 363 39 20 chr17 60904144 60904246 -28600307 + MIR SINE MIR 20 123 -85 * 3079 224 48 146 chr17 60904245 60904491 -28600062 - L2 LINE L2 0 3313 3045 2302 110 0 0 chr17 60904491 60904815 -28599738 - AluSq SINE Alu 0 324 1 3079 224 48 146 chr17 60904815 60905210 -28599343 - L2 LINE L2 -268 3045 2613 2131 102 6 25 chr17 60905210 60905524 -28599029 - AluSx SINE Alu -3 309 2 3079 224 48 146 chr17 60905524 60906988 -28597565 - L2 LINE L2 -700 2613 1409 497 268 35 0 chr17 60906975 60907117 -28597436 + MIR SINE MIR 98 244 -18 * 261 252 136 48 chr17 60907156 60907259 -28597294 - MIR SINE MIR -1 261 150 643 301 36 10 chr17 60908281 60908477 -28596076 - MIR SINE MIR -15 247 47 222 37 0 0 chr17 60908994 60909021 -28595532 + (CAG)n Simple_repeat Simple_repeat 2 28 0 219 69 0 0 chr17 60909719 60909748 -28594805 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 8326 17 0 0 chr17 60912146 60913521 -28591032 - L1PA2 LINE L1 -4 6151 4777 12659 27 0 0 chr17 60913521 60914986 -28589567 + L1PA2 LINE L1 3341 4805 -1341 530 239 3 186 chr17 60915399 60915705 -28588848 - MIR SINE MIR 0 262 13 206 218 18 18 chr17 60915788 60915843 -28588710 + (TAA)n Simple_repeat Simple_repeat 1 55 0 896 124 0 0 chr17 60915908 60916037 -28588516 - L1MA3 LINE L1 0 6305 6177 3595 115 11 11 chr17 60916039 60916580 -28587973 - L1MA3 LINE L1 -287 6018 5478 852 203 90 0 chr17 60916627 60916804 -28587749 - L1PB3 LINE L1 -5 6149 5957 * 1566 118 5 8 chr17 60916801 60917063 -28587490 + L1P5 LINE L1 5472 5735 -426 189 308 33 44 chr17 60917065 60917156 -28587397 - MIR SINE MIR -101 161 72 1762 120 50 101 chr17 60917175 60917381 -28587172 - Tigger1 DNA MER2_type 0 2418 2236 1582 163 94 0 chr17 60917381 60917657 -28586896 + AluJb SINE Alu 1 302 -10 1762 120 50 101 chr17 60917657 60917807 -28586746 - Tigger1 DNA MER2_type -182 2236 2080 2120 169 5 20 chr17 60917808 60918198 -28586355 - L1PA16 LINE L1 0 6166 5783 306 167 0 0 chr17 60918222 60918282 -28586271 + (TG)n Simple_repeat Simple_repeat 1 60 0 235 196 0 0 chr17 60918303 60918359 -28586194 + LTR66 LTR ERVL 389 444 -166 3095 137 18 20 chr17 60918359 60918993 -28585560 - L1PA16 LINE L1 -387 5769 5139 2847 199 7 7 chr17 60918989 60919573 -28584980 + L1PA16 LINE L1 4556 5139 -1007 * 7807 117 15 65 chr17 60919574 60920255 -28584298 - Tigger1 DNA MER2_type -329 2089 1508 2107 123 3 0 chr17 60920255 60920548 -28584005 + AluSx SINE Alu 1 294 -18 7807 117 15 65 chr17 60920548 60921225 -28583328 - Tigger1 DNA MER2_type -910 1508 799 26764 139 17 14 chr17 60921229 60924010 -28580543 - L1PA8A LINE L1 -18 6428 3656 2398 100 0 3 chr17 60924010 60924321 -28580232 - AluSq SINE Alu -3 310 1 26764 139 17 14 chr17 60924321 60926680 -28577873 - L1PA8A LINE L1 -2790 3656 1211 183 100 0 0 chr17 60926680 60926710 -28577843 + (TTG)n Simple_repeat Simple_repeat 1 30 0 26764 139 17 14 chr17 60926710 60927920 -28576633 - L1PA8A LINE L1 -5235 1211 6 5199 154 13 2 chr17 60927920 60928749 -28575804 - Tigger1 DNA MER2_type -1579 839 2 1302 180 28 82 chr17 60929068 60929330 -28575223 + MER33 DNA MER1_type 1 229 -2356 2333 137 60 39 chr17 60929330 60929656 -28574897 - L1MB2 LINE L1 -7 6164 5825 1952 125 17 10 chr17 60929656 60929945 -28574608 + AluSx SINE Alu 1 291 -21 2333 137 60 39 chr17 60929945 60930049 -28574504 - L1MB2 LINE L1 -346 5825 5725 1302 180 28 82 chr17 60930049 60930141 -28574412 + MER33 DNA MER1_type 229 324 0 289 353 35 18 chr17 60930794 60930964 -28573589 + L2 LINE L2 2888 3060 -212 721 204 33 0 chr17 60930964 60931116 -28573437 - LTR33 LTR ERVL -1 520 364 407 268 115 13 chr17 60931213 60931370 -28573183 - LTR33 LTR ERVL -348 173 1 227 336 35 63 chr17 60931478 60931621 -28572932 + L2 LINE L2 3134 3272 0 1424 185 55 85 chr17 60932324 60932431 -28572122 - MLT1C LTR MaLR 0 467 358 4399 101 0 0 chr17 60932431 60932985 -28571568 - MER41A LTR ERV1 0 554 1 1424 185 55 85 chr17 60932985 60933336 -28571217 - MLT1C LTR MaLR -109 358 23 2305 85 7 13 chr17 60933470 60933776 -28570777 - AluSc SINE Alu 0 309 6 221 0 35 0 chr17 60934362 60934391 -28570162 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 434 194 69 83 chr17 60935046 60935190 -28569363 - L1ME3A LINE L1 0 6170 6029 359 203 61 68 chr17 60935238 60935386 -28569167 - L1ME3A LINE L1 -137 6033 5887 2731 26 0 0 chr17 60935733 60936039 -28568514 - AluYa5 SINE Alu -5 306 1 2907 192 48 0 chr17 60936271 60936829 -28567724 - L1MB5 LINE L1 -19 6155 5571 321 321 14 64 chr17 60937709 60937849 -28566704 - MIR SINE MIR -82 180 48 384 322 41 56 chr17 60937907 60938122 -28566431 + MIR SINE MIR 32 244 -18 661 302 68 32 chr17 60939271 60939523 -28565030 + MIR SINE MIR 1 261 -1 1515 290 41 50 chr17 60940674 60941360 -28563193 - L1ME LINE L1 -5388 682 3 802 301 57 53 chr17 60942683 60943281 -28561272 + L1MC4a LINE L1 5293 5825 -337 313 246 14 88 chr17 60943281 60943492 -28561061 - MIR SINE MIR -19 243 2 302 267 25 93 chr17 60943675 60943836 -28560717 + LTR16A LTR ERVL 105 254 -196 * 3960 151 14 50 chr17 60943825 60944075 -28560478 - MER50 LTR ERV1 -11 723 465 2093 117 3 0 chr17 60944075 60944401 -28560152 - AluSq SINE Alu 0 327 1 3960 151 14 50 chr17 60944401 60944889 -28559664 - MER50 LTR ERV1 -269 465 11 303 269 21 11 chr17 60944900 60944993 -28559560 + LTR16A LTR ERVL 251 344 -106 388 32 16 32 chr17 60945004 60945067 -28559486 + (TTTTTG)n Simple_repeat Simple_repeat 6 67 0 207 286 79 0 chr17 60945407 60945470 -28559083 - L2 LINE L2 0 3313 3246 203 262 0 0 chr17 60945948 60945990 -28558563 + L2 LINE L2 3252 3293 -20 455 254 70 45 chr17 60946703 60946904 -28557649 - MER102b DNA MER1_type -32 309 104 230 227 0 0 chr17 60946933 60946977 -28557576 + LTR33 LTR ERVL 120 163 -358 287 339 65 8 chr17 60947683 60947807 -28556746 + MIR SINE MIR 22 152 -56 315 164 49 0 chr17 60947812 60947873 -28556680 - L2 LINE L2 -1 3312 3249 1223 256 88 28 chr17 60947910 60947928 -28556625 + MLT1C LTR MaLR 16 31 -436 252 0 0 0 chr17 60947928 60947956 -28556597 + (TA)n Simple_repeat Simple_repeat 2 29 0 1223 256 88 28 chr17 60947956 60948362 -28556191 + MLT1C LTR MaLR 31 467 0 213 174 0 58 chr17 60948740 60948826 -28555727 + (TAAA)n Simple_repeat Simple_repeat 4 84 0 2044 149 7 0 chr17 60948873 60949175 -28555378 + AluSq SINE Alu 2 305 -8 209 257 54 14 chr17 60949826 60949900 -28554653 - MIR SINE MIR -131 131 55 887 219 105 43 chr17 60950705 60950915 -28553638 + MER58A DNA MER1_type 1 223 -1 357 75 0 0 chr17 60950956 60951009 -28553544 + (TG)n Simple_repeat Simple_repeat 2 54 0 594 293 95 49 chr17 60952188 60952598 -28551955 - L1ME4a LINE L1 -230 5891 5463 353 266 108 14 chr17 60952759 60952898 -28551655 + MIR SINE MIR 9 160 -102 1719 173 0 3 chr17 60953634 60953923 -28550630 - AluJo SINE Alu -24 288 1 180 300 73 73 chr17 60954036 60954146 -28550407 + L2 LINE L2 3154 3263 -9 2309 77 0 26 chr17 60955129 60955439 -28549114 - AluY SINE Alu -9 302 1 1714 239 114 19 chr17 60955443 60955967 -28548586 - MLT1E2 LTR MaLR -1 625 52 273 355 64 0 chr17 60956140 60956250 -28548303 + MIR SINE MIR 8 124 -138 2249 158 80 42 chr17 60956699 60957149 -28547404 + MLT1C LTR MaLR 1 467 0 2109 88 0 120 chr17 60957334 60957685 -28546868 - AluSc SINE Alu 0 309 1 181 351 27 0 chr17 60957709 60957783 -28546770 + MIR SINE MIR 166 241 -21 1625 188 0 32 chr17 60958158 60958466 -28546087 - AluJo SINE Alu -14 298 1 586 272 80 36 chr17 60958784 60959008 -28545545 + MIR SINE MIR 17 250 -12 378 44 11 0 chr17 60959414 60959474 -28545079 + L1PA8A LINE L1 5373 5437 -694 4460 122 43 8 chr17 60959474 60960113 -28544440 + L1PA15 LINE L1 5479 6155 -10 545 234 262 16 chr17 60960456 60960708 -28543845 + L2 LINE L2 2664 2977 -337 1521 212 179 12 chr17 60960767 60961187 -28543366 + MLT1D LTR MaLR 13 502 -3 288 53 0 0 chr17 60961266 60961304 -28543249 + (CA)n Simple_repeat Simple_repeat 2 39 0 717 259 65 22 chr17 60961310 60961542 -28543011 + L2 LINE L2 3072 3313 0 261 83 0 0 chr17 60961713 60961749 -28542804 + (TG)n Simple_repeat Simple_repeat 2 37 0 286 335 162 32 chr17 60962466 60962877 -28541676 - L2 LINE L2 -227 3045 2596 1240 197 97 63 chr17 60963780 60964130 -28540423 + MLT1A1 LTR MaLR 4 365 0 253 187 0 6 chr17 60964394 60964474 -28540079 + MER5C DNA MER1_type 2 124 -200 188 125 75 0 chr17 60964612 60964652 -28539901 + MER5C DNA MER1_type 280 322 -2 494 253 33 20 chr17 60964669 60964819 -28539734 + MER5A DNA MER1_type 35 186 -3 216 186 0 0 chr17 60965186 60965229 -28539324 + (CTATA)n Simple_repeat Simple_repeat 1 43 0 310 327 77 18 chr17 60965418 60965586 -28538967 + MER5B DNA MER1_type 1 178 0 800 192 0 0 chr17 60965617 60965742 -28538811 - FLAM_C SINE Alu -8 125 1 267 270 59 138 chr17 60966526 60966830 -28537723 - L2 LINE L2 -48 3224 2945 326 223 89 18 chr17 60967066 60967178 -28537375 + MER112 DNA MER1_type 65 184 -76 521 252 34 34 chr17 60967233 60967380 -28537173 - MIR3 SINE MIR -56 152 6 336 227 0 23 chr17 60968329 60968457 -28536096 + CT-rich Low_complexity Low_complexity 1 125 0 270 56 0 0 chr17 60968571 60968607 -28535946 + (TG)n Simple_repeat Simple_repeat 1 36 0 717 230 80 52 chr17 60968669 60968882 -28535671 + MER20 DNA MER1_type 1 219 0 347 305 152 0 chr17 60968920 60969071 -28535482 - MIR SINE MIR -12 250 77 200 337 31 10 chr17 60969450 60969548 -28535005 + MIR SINE MIR 36 135 -73 23 0 0 0 chr17 60970708 60970731 -28533822 + AT_rich Low_complexity Low_complexity 1 23 0 1180 137 0 0 chr17 60970731 60970892 -28533661 - AluSc SINE Alu -17 292 132 2206 105 0 10 chr17 60970892 60971197 -28533356 - AluSc SINE Alu -7 302 1 614 271 103 28 chr17 60971315 60971529 -28533024 - MIR SINE MIR -5 257 28 632 258 46 7 chr17 60971860 60972011 -28532542 + MIR SINE MIR 7 163 -99 464 289 66 12 chr17 60972019 60972185 -28532368 - MLT1I LTR MaLR -2 407 233 1255 142 19 9 chr17 60972196 60972407 -28532146 - MER20 DNA MER1_type -6 213 1 494 306 29 10 chr17 60972444 60972650 -28531903 - MLT1I LTR MaLR -197 212 3 289 288 0 0 chr17 60972652 60972732 -28531821 + MIR SINE MIR 167 246 -16 419 313 140 52 chr17 60973021 60973465 -28531088 + L2 LINE L2 2831 3313 0 239 93 23 0 chr17 60973487 60973530 -28531023 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 507 286 30 10 chr17 60975533 60975732 -28528821 - L1MC4a LINE L1 -1897 5911 5709 215 299 0 15 chr17 60975741 60975808 -28528745 + (TATG)n Simple_repeat Simple_repeat 3 68 0 268 357 37 54 chr17 60975812 60976109 -28528444 - L1MC4a LINE L1 -2125 5683 5392 403 339 52 11 chr17 60976406 60976580 -28527973 + MIR SINE MIR 81 261 -1 435 368 27 11 chr17 60976800 60976985 -28527568 - MIR3 SINE MIR -1 207 20 342 242 54 27 chr17 60977122 60977271 -28527282 + L1MC4a LINE L1 5273 5425 -739 303 284 52 22 chr17 60977337 60977471 -28527082 + L1MC4a LINE L1 5443 5580 -2228 2183 174 40 79 chr17 60977480 60977998 -28526555 + MLT1D LTR MaLR 8 505 0 250 300 46 15 chr17 60978167 60978297 -28526256 + L1MC4a LINE L1 5783 5916 -1892 24 53 0 0 chr17 60978461 60978499 -28526054 + AT_rich Low_complexity Low_complexity 1 38 0 198 250 0 33 chr17 60978904 60978964 -28525589 + L2 LINE L2 3004 3061 -211 2544 135 80 2 chr17 60979245 60979646 -28524907 + MSTB1 LTR MaLR 1 432 0 646 154 172 24 chr17 60979711 60979880 -28524673 + L1ME3A LINE L1 5977 6170 0 318 267 145 8 chr17 60979884 60980015 -28524538 + L2 LINE L2 3028 3176 -137 218 279 66 0 chr17 60980167 60980228 -28524325 + L2 LINE L2 3241 3305 -8 3128 207 12 14 chr17 60980701 60981357 -28523196 - L1MB8 LINE L1 -16 6162 5508 393 261 9 18 chr17 60981525 60981636 -28522917 - MIR SINE MIR -1 261 152 247 318 24 32 chr17 60981718 60981844 -28522709 - L2 LINE L2 0 3313 3189 563 330 180 30 chr17 60981916 60982549 -28522004 - L2 LINE L2 -861 2453 1726 289 291 199 21 chr17 60982776 60982917 -28521636 + MIR SINE MIR 97 262 0 216 344 175 7 chr17 60984443 60984597 -28519956 + L3 LINE CR1 969 1148 -429 205 238 0 0 chr17 60985223 60985265 -28519288 + L3 LINE CR1 1523 1564 -13 189 284 134 15 chr17 60985279 60985346 -28519207 - MIR3 SINE MIR -46 162 88 719 210 150 0 chr17 60985975 60986142 -28518411 - MIR SINE MIR -2 260 69 270 0 0 0 chr17 60986772 60986802 -28517751 + (TG)n Simple_repeat Simple_repeat 1 30 0 285 51 0 0 chr17 60986804 60986843 -28517710 + (GA)n Simple_repeat Simple_repeat 2 40 0 455 237 230 7 chr17 60987054 60987193 -28517360 - MER5A DNA MER1_type -10 179 10 245 311 170 0 chr17 60987240 60987346 -28517207 - MIR SINE MIR -116 146 23 242 247 143 0 chr17 60987915 60987992 -28516561 + L2 LINE L2 3184 3271 -1 592 277 62 55 chr17 60988178 60988434 -28516119 - MIR SINE MIR 0 262 5 321 269 125 10 chr17 60989845 60989949 -28514604 - MIR SINE MIR -110 152 37 2128 122 6 13 chr17 60989965 60990277 -28514276 - AluSx SINE Alu -2 310 1 477 204 0 0 chr17 60991340 60991428 -28513125 - MER103 DNA DNA -77 89 2 825 157 25 0 chr17 60994408 60994529 -28510024 + FLAM_C SINE Alu 2 125 -18 188 222 95 0 chr17 60994880 60994943 -28509610 - MIR SINE MIR -71 191 123 2091 186 3 19 chr17 60995248 60995619 -28508934 - MLT1A1 LTR MaLR 0 365 1 405 0 0 0 chr17 60996192 60996237 -28508316 + (TG)n Simple_repeat Simple_repeat 2 46 0 3073 218 84 41 chr17 60996431 60997239 -28507314 - MER21B LTR ERV1 -2 861 19 329 241 0 0 chr17 60997264 60997322 -28507231 - MER21B LTR ERV1 -776 87 30 283 295 51 10 chr17 60997683 60997789 -28506764 - MIR SINE MIR -21 187 80 249 295 124 37 chr17 60997965 60998128 -28506425 - MIR SINE MIR -71 137 21 276 356 39 10 chr17 60999706 60999810 -28504743 - L2 LINE L2 -55 3217 3111 27 29 0 0 chr17 61000421 61000455 -28504098 + AT_rich Low_complexity Low_complexity 1 34 0 2274 125 0 3 chr17 61001161 61001474 -28503079 - AluSx SINE Alu 0 312 1 399 335 41 27 chr17 61001820 61002041 -28502512 + L3 LINE CR1 243 466 -1111 209 295 32 21 chr17 61002242 61002337 -28502216 + L3 LINE CR1 1131 1226 -351 364 314 173 48 chr17 61002339 61003052 -28501501 + L2 LINE L2 1864 2665 -649 743 221 25 35 chr17 61003226 61003425 -28501128 + MIR SINE MIR 53 249 -13 2283 108 0 3 chr17 61004587 61004892 -28499661 - AluSc SINE Alu -5 304 1 213 319 60 26 chr17 61006091 61006207 -28498346 + L2 LINE L2 3027 3146 -167 1872 214 24 41 chr17 61006216 61006683 -28497870 + MLT1C LTR MaLR 6 464 -3 371 302 39 16 chr17 61006687 61006816 -28497737 + L2 LINE L2 3116 3247 -25 261 0 0 0 chr17 61006820 61006849 -28497704 + (A)n Simple_repeat Simple_repeat 1 29 0 2262 154 19 8 chr17 61007991 61008361 -28496192 - THE1C LTR MaLR -1 374 1 1089 63 0 0 chr17 61008361 61008504 -28496049 - THE1C-int LTR MaLR 0 1580 1438 10107 125 35 11 chr17 61008504 61010009 -28494544 - THE1C-int LTR MaLR -38 1542 2 2249 127 58 19 chr17 61010010 61010371 -28494182 - THE1C LTR MaLR 0 375 1 462 305 158 11 chr17 61010593 61010783 -28493770 - MIR SINE MIR -25 237 20 344 358 40 20 chr17 61010997 61011145 -28493408 - MIR SINE MIR -109 153 3 588 289 28 11 chr17 61011565 61011745 -28492808 - MIR SINE MIR -60 202 20 1054 241 43 80 chr17 61012828 61013180 -28491373 + MER102b DNA MER1_type 1 339 -2 198 376 0 43 chr17 61014603 61014720 -28489833 - L2 LINE L2 -17 3296 3185 191 299 15 15 chr17 61014813 61014880 -28489673 - L2 LINE L2 -208 3064 2998 369 0 0 0 chr17 61014926 61014967 -28489586 + (TG)n Simple_repeat Simple_repeat 2 42 0 212 323 0 15 chr17 61015322 61015387 -28489166 - L2 LINE L2 -3 3310 3247 244 120 40 0 chr17 61017127 61017177 -28487376 + CT-rich Low_complexity Low_complexity 4 55 0 431 321 0 37 chr17 61017513 61017647 -28486906 + MIR SINE MIR 23 151 -57 212 189 0 75 chr17 61017828 61017881 -28486672 + L3 LINE CR1 1516 1564 -13 500 282 162 54 chr17 61018171 61018530 -28486023 - L2 LINE L2 -244 3069 2668 341 276 23 0 chr17 61018642 61018729 -28485824 + MIR SINE MIR 46 134 -128 2144 129 0 26 chr17 61018740 61019051 -28485502 - AluSx SINE Alu -9 303 1 186 233 100 0 chr17 61019052 61019112 -28485441 + MIR SINE MIR 123 188 -74 245 372 11 0 chr17 61019305 61019399 -28485154 - MIR SINE MIR -95 113 19 1091 236 5 9 chr17 61019409 61019629 -28484924 + MER58A DNA MER1_type 4 222 -2 416 161 0 11 chr17 61021699 61021786 -28482767 + GA-rich Low_complexity Low_complexity 2 87 0 252 113 0 48 chr17 61023056 61023118 -28481435 + (TTTTC)n Simple_repeat Simple_repeat 1 59 0 514 260 13 19 chr17 61023725 61023879 -28480674 + MIR SINE MIR 68 220 -42 187 222 0 0 chr17 61024091 61024127 -28480426 + L2 LINE L2 3268 3303 -10 212 241 74 0 chr17 61024285 61024339 -28480214 + L2 LINE L2 3256 3313 0 273 298 29 0 chr17 61024471 61024575 -28479978 - LTR67 LTR ERVL -21 536 430 293 245 31 71 chr17 61024668 61024766 -28479787 - MLT1K LTR MaLR -306 282 189 1940 171 10 75 chr17 61024915 61025331 -28479222 - MLT1B LTR MaLR 0 390 2 2308 109 3 0 chr17 61025417 61025729 -28478824 + AluSq SINE Alu 1 313 0 562 279 44 111 chr17 61026726 61027221 -28477332 + L2 LINE L2 2811 3272 0 274 291 64 71 chr17 61027583 61027724 -28476829 + MIR SINE MIR 5 144 -118 232 254 28 28 chr17 61028391 61028462 -28476091 - Tigger3(Golem) DNA MER2_type -1911 1118 1048 335 333 0 0 chr17 61028796 61028889 -28475664 + MIR SINE MIR 38 130 -78 213 258 0 61 chr17 61028895 61028961 -28475592 + MIR3 SINE MIR 99 160 -48 274 304 35 17 chr17 61028961 61029076 -28475477 - MER117 DNA MER1_type 0 197 81 263 178 0 0 chr17 61029143 61029188 -28475365 + MIR3 SINE MIR 158 202 -6 228 244 26 39 chr17 61029643 61029721 -28474832 + L2 LINE L2 3195 3271 -1 211 231 25 16 chr17 61029791 61029912 -28474641 + (TA)n Simple_repeat Simple_repeat 2 123 0 251 152 0 0 chr17 61029912 61029958 -28474595 - LTR66 LTR ERVL -171 439 394 249 152 0 0 chr17 61029918 61029964 -28474589 + LTR66 LTR ERVL 394 439 -171 * 237 178 0 0 chr17 61029964 61030009 -28474544 + (TA)n Simple_repeat Simple_repeat 1 45 0 280 317 58 29 chr17 61030144 61030248 -28474305 + MIR SINE MIR 14 120 -142 506 273 88 24 chr17 61030287 61030552 -28474001 - MLT1I LTR MaLR -34 416 130 1908 133 35 0 chr17 61030651 61030937 -28473616 + AluSx SINE Alu 4 299 -13 201 191 21 0 chr17 61031306 61031353 -28473200 + T-rich Low_complexity Low_complexity 2 49 0 344 290 99 91 chr17 61031472 61031944 -28472609 - L2 LINE L2 -1420 1894 1414 1623 194 21 0 chr17 61031944 61032232 -28472321 - AluJo SINE Alu -18 294 1 344 290 99 91 chr17 61032232 61032355 -28472198 - L2 LINE L2 -1900 1414 1294 2086 125 7 0 chr17 61033144 61033433 -28471120 + AluSx SINE Alu 1 291 -21 302 292 0 11 chr17 61033451 61033540 -28471013 - L1MC4 LINE L1 -1339 6703 6616 183 340 43 0 chr17 61034748 61034842 -28469711 - MIR SINE MIR -67 195 98 499 299 138 26 chr17 61035844 61036222 -28468331 + L2 LINE L2 2816 3235 -78 979 214 0 20 chr17 61036229 61036425 -28468128 - AluJo SINE Alu -120 192 1 462 194 0 51 chr17 61036430 61036528 -28468025 + L2 LINE L2 3221 3313 0 189 94 0 0 chr17 61037945 61037977 -28466576 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 268 42 0 42 chr17 61040457 61040505 -28464048 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 27 49 0 0 chr17 61040516 61040557 -28463996 + AT_rich Low_complexity Low_complexity 1 41 0 232 233 165 48 chr17 61041194 61041297 -28463256 + MER5B DNA MER1_type 23 137 -41 329 260 60 10 chr17 61041417 61041517 -28463036 + MER103 DNA DNA 57 161 -5 557 325 46 5 chr17 61042294 61042488 -28462065 + MIR SINE MIR 46 247 -15 767 314 9 9 chr17 61044001 61044230 -28460323 - MIR SINE MIR -3 259 31 239 154 0 92 chr17 61044355 61044420 -28460133 + L1MCa LINE L1 2006 2064 -4362 10326 143 16 6 chr17 61044421 61046025 -28458528 + Tigger1 DNA MER2_type 2 1620 -798 2835 141 14 0 chr17 61046025 61046444 -28458109 + MSTB LTR MaLR 1 425 -1 * 4620 156 27 9 chr17 61046444 61047229 -28457324 + Tigger1 DNA MER2_type 1620 2418 0 199 284 15 47 chr17 61047396 61047519 -28457034 - MIR SINE MIR -70 192 51 182 226 113 16 chr17 61047878 61047940 -28456613 + L2 LINE L2 3233 3300 -13 294 228 174 71 chr17 61049012 61049196 -28455357 - MIR SINE MIR -50 212 10 7538 53 6 0 chr17 61049477 61050746 -28453807 + L1PA5 LINE L1 4870 6143 -11 225 0 0 0 chr17 61050750 61050775 -28453778 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 676 233 19 74 chr17 61050879 61051094 -28453459 - MLT1D LTR MaLR -4 501 299 324 70 0 0 chr17 61051203 61051246 -28453307 + (TG)n Simple_repeat Simple_repeat 2 44 0 234 0 0 0 chr17 61051246 61051272 -28453281 + (TA)n Simple_repeat Simple_repeat 2 27 0 285 311 0 22 chr17 61051272 61051362 -28453191 + MER21B LTR ERV1 5 92 -771 2485 235 82 27 chr17 61051382 61051834 -28452719 + MER21B LTR ERV1 19 517 -346 2810 7 0 0 chr17 61051834 61052133 -28452420 - AluYa5 SINE Alu -12 299 1 2485 235 82 27 chr17 61052133 61052313 -28452240 + MER21B LTR ERV1 517 686 -177 601 162 0 10 chr17 61052342 61052441 -28452112 - MLT1D LTR MaLR -407 98 1 737 215 0 0 chr17 61052519 61052668 -28451885 + L1MC1 LINE L1 4800 4948 -1198 13756 27 0 0 chr17 61052674 61054724 -28449829 - L1P LINE L1 -2794 3352 1304 7919 12 0 0 chr17 61054724 61056078 -28448475 + L1PA2 LINE L1 4801 6154 -1 5319 165 56 5 chr17 61056250 61057572 -28446981 + L1MC1 LINE L1 4942 6332 -1 232 295 139 16 chr17 61057957 61058079 -28446474 + L2 LINE L2 3133 3269 -3 1469 147 76 8 chr17 61058682 61058920 -28445633 + AluJb SINE Alu 35 288 -24 1631 186 0 23 chr17 61059115 61059422 -28445131 + AluJo SINE Alu 1 300 -12 495 115 0 13 chr17 61060447 61060525 -28444028 - MER1B DNA MER1_type 0 329 253 896 177 14 0 chr17 61060537 61060684 -28443869 + AluJb SINE Alu 147 295 -17 654 110 0 0 chr17 61060685 61060776 -28443777 + MER1B DNA MER1_type 160 250 -89 1392 148 7 16 chr17 61060962 61061234 -28443319 - MER1B DNA MER1_type -75 264 1 382 313 58 46 chr17 61061446 61062164 -28442389 - L1M4 LINE L1 -1310 4836 4110 1090 153 0 0 chr17 61062361 61062550 -28442003 - MER53 DNA DNA 0 189 1 525 313 8 0 chr17 61062976 61063110 -28441443 + MIR3 SINE MIR 24 158 -50 287 339 139 52 chr17 61063856 61064237 -28440316 + L2 LINE L2 2855 3268 -4 743 289 185 14 chr17 61064430 61064852 -28439701 - LTR33A LTR ERVL -29 494 1 192 304 48 64 chr17 61065226 61065351 -28439202 + L2 LINE L2 2952 3074 -198 236 280 142 15 chr17 61065429 61065697 -28438856 + L1ME4a LINE L1 5786 6087 -34 240 344 21 0 chr17 61066337 61066433 -28438120 - MLT1I LTR MaLR -284 125 28 189 0 0 0 chr17 61066676 61066697 -28437856 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 180 0 0 0 chr17 61066703 61066723 -28437830 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2124 112 3 0 chr17 61066723 61067009 -28437544 - AluSx SINE Alu -25 287 1 2125 137 0 0 chr17 61067011 61067304 -28437249 - AluSx SINE Alu -19 293 1 2251 56 0 7 chr17 61067457 61067770 -28436783 + AluY SINE Alu 1 311 0 24 53 0 0 chr17 61068762 61068800 -28435753 + AT_rich Low_complexity Low_complexity 1 38 0 401 252 82 74 chr17 61068810 61069080 -28435473 - L1ME4a LINE L1 -97 6024 5753 1036 178 16 0 chr17 61069836 61070021 -28434532 + MER5A DNA MER1_type 2 189 0 1914 133 3 48 chr17 61070669 61070984 -28433569 - AluSx SINE Alu -11 301 1 579 171 166 55 chr17 61070990 61071171 -28433382 - MER20 DNA MER1_type 0 219 19 931 136 32 7 chr17 61071535 61071689 -28432864 - AluSc SINE Alu 0 309 152 608 230 0 0 chr17 61071919 61072058 -28432495 + L1 LINE L1 3580 3718 -2428 7343 157 32 11 chr17 61072336 61072705 -28431848 - L1PB1 LINE L1 0 6151 5791 570 15 0 0 chr17 61072705 61072772 -28431781 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 7343 157 32 11 chr17 61072772 61073284 -28431269 - L1PB1 LINE L1 -360 5791 5291 2070 114 64 25 chr17 61073284 61073645 -28430908 - THE1C LTR MaLR 0 375 1 7343 157 32 11 chr17 61073645 61075262 -28429291 - L1PB1 LINE L1 -860 5291 3591 360 294 119 0 chr17 61076277 61076403 -28428150 - MIR SINE MIR -26 236 96 626 220 50 71 chr17 61077870 61078052 -28426501 + MIR SINE MIR 2 179 -83 748 193 106 6 chr17 61078324 61078485 -28426068 + MER45A DNA AcHobo 2 178 0 21 0 0 0 chr17 61078971 61078992 -28425561 + AT_rich Low_complexity Low_complexity 1 21 0 218 269 58 0 chr17 61079359 61079411 -28425142 + MIR SINE MIR 92 146 -62 1001 186 13 58 chr17 61080107 61080333 -28424220 + MER20 DNA MER1_type 1 216 -3 234 208 0 0 chr17 61080848 61080901 -28423652 + CT-rich Low_complexity Low_complexity 1 53 0 352 323 85 48 chr17 61081099 61081347 -28423206 + L2 LINE L2 2808 3064 -208 261 261 42 34 chr17 61081419 61081538 -28423015 - MER103 DNA DNA -46 120 1 2120 147 0 0 chr17 61081899 61082206 -28422347 - AluSx SINE Alu -1 311 5 204 364 87 14 chr17 61082589 61082772 -28421781 + MIR SINE MIR 18 206 -56 189 279 162 9 chr17 61082807 61082918 -28421635 + L2 LINE L2 3145 3272 0 1664 191 13 20 chr17 61083037 61083335 -28421218 + AluJb SINE Alu 3 298 -14 228 78 0 109 chr17 61083344 61083408 -28421145 + (GGAAA)n Simple_repeat Simple_repeat 5 61 0 1038 144 0 0 chr17 61083409 61083589 -28420964 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 2494 119 18 2 chr17 61083603 61083998 -28420555 - MSTA LTR MaLR -27 401 1 393 197 222 17 chr17 61084636 61084753 -28419800 + MER5A DNA MER1_type 49 189 0 382 308 70 29 chr17 61085443 61085784 -28418769 + L1MC4a LINE L1 5557 5911 -1897 598 304 52 9 chr17 61086495 61086729 -28417824 - MIR SINE MIR -4 258 15 223 242 182 10 chr17 61087914 61088013 -28416540 + MIR SINE MIR 147 262 0 339 264 0 0 chr17 61088218 61088290 -28416263 + L2 LINE L2 3242 3313 0 299 300 90 31 chr17 61089505 61089658 -28414895 - MIR SINE MIR -47 215 46 191 222 289 33 chr17 61091349 61091439 -28413114 + L3 LINE CR1 1347 1459 -118 243 0 0 0 chr17 61092325 61092352 -28412201 + (A)n Simple_repeat Simple_repeat 1 27 0 187 318 34 81 chr17 61092937 61093085 -28411468 + MIR SINE MIR 57 197 -65 1225 295 108 26 chr17 61094606 61095182 -28409371 - L3 LINE CR1 -146 1431 809 264 324 57 29 chr17 61095311 61095416 -28409137 + L2 LINE L2 3150 3257 -15 354 313 44 48 chr17 61095560 61095787 -28408766 + MIR SINE MIR 3 228 -34 23 54 0 0 chr17 61096393 61096430 -28408123 + AT_rich Low_complexity Low_complexity 1 37 0 2768 209 25 20 chr17 61096469 61097009 -28407544 + MER63C DNA MER1_type 244 780 -280 14959 180 15 25 chr17 61097009 61098709 -28405844 - L1PA14 LINE L1 0 6161 4444 2317 106 0 3 chr17 61098709 61099020 -28405533 - AluSg SINE Alu 0 310 1 14959 180 15 25 chr17 61099020 61099389 -28405164 - L1PA14 LINE L1 -1717 4444 4072 526 101 13 0 chr17 61099389 61099468 -28405085 + MADE1 DNA Mariner 1 80 0 14959 180 15 25 chr17 61099468 61101382 -28403171 - L1PA14 LINE L1 -2089 4072 2212 2768 209 25 20 chr17 61101382 61101525 -28403028 + MER63C DNA MER1_type 780 930 0 1291 167 19 10 chr17 61101911 61102208 -28402345 + L1MA4 LINE L1 6009 6304 -1 24 67 0 0 chr17 61102762 61102807 -28401746 + AT_rich Low_complexity Low_complexity 1 45 0 1046 288 74 18 chr17 61102944 61103542 -28401011 - L1ME3 LINE L1 -238 5924 5294 800 123 0 0 chr17 61103828 61103934 -28400619 + FRAM SINE Alu 38 143 -33 195 114 0 0 chr17 61103938 61103973 -28400580 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 463 288 57 41 chr17 61103977 61104228 -28400325 - L1ME3 LINE L1 -1156 4990 4744 2662 179 25 41 chr17 61104228 61104787 -28399766 - MER44D DNA MER2_type 0 605 1 463 288 57 41 chr17 61104787 61105098 -28399455 - L1ME3 LINE L1 -1402 4744 4419 778 298 65 27 chr17 61105156 61105790 -28398763 - L1ME3 LINE L1 -1807 4339 3682 390 266 70 16 chr17 61106845 61106973 -28397580 - L2 LINE L2 0 3313 3179 293 75 0 0 chr17 61108900 61108940 -28395613 + U2 snRNA snRNA 1 40 -148 1401 271 102 14 chr17 61109471 61110029 -28394524 - Tigger8 DNA MER2_type -59 607 1 189 74 0 0 chr17 61110093 61110120 -28394433 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 507 282 84 66 chr17 61110176 61110403 -28394150 - MIR SINE MIR -18 244 14 243 252 282 8 chr17 61110779 61110910 -28393643 - MIR SINE MIR -65 197 31 228 307 221 0 chr17 61111191 61111331 -28393222 - MIR SINE MIR -71 191 21 717 242 22 0 chr17 61111441 61111619 -28392934 - LTR16C LTR ERVL -12 479 298 2133 109 3 0 chr17 61111834 61112117 -28392436 + AluSx SINE Alu 19 302 -10 401 308 76 12 chr17 61112133 61112383 -28392170 + L1M4 LINE L1 4573 4838 -1308 1912 143 0 7 chr17 61113772 61114052 -28390501 + AluSx SINE Alu 1 278 -34 440 326 31 16 chr17 61114840 61114969 -28389584 - MIR3 SINE MIR -27 181 51 932 228 0 15 chr17 61115156 61115358 -28389195 + AluJo SINE Alu 1 199 -113 228 202 53 11 chr17 61115361 61115441 -28389112 + (TAA)n Simple_repeat Simple_repeat 3 89 -11 1581 184 3 14 chr17 61115441 61115729 -28388824 + AluJo SINE Alu 1 285 -27 228 202 53 11 chr17 61115729 61115742 -28388811 + (TAA)n Simple_repeat Simple_repeat 89 100 0 2008 159 3 7 chr17 61116119 61116421 -28388132 + AluSx SINE Alu 1 301 -11 291 244 12 47 chr17 61117290 61117376 -28387177 + MER5B DNA MER1_type 1 83 -95 757 169 0 0 chr17 61118555 61118673 -28385880 + FLAM_C SINE Alu 1 118 -25 29 0 0 0 chr17 61118673 61118702 -28385851 + AT_rich Low_complexity Low_complexity 1 29 0 387 264 98 12 chr17 61119338 61119501 -28385052 - MIR SINE MIR -50 212 36 376 339 48 11 chr17 61119648 61119834 -28384719 + MIR SINE MIR 54 246 -16 2383 39 3 7 chr17 61121292 61121613 -28382940 + AluY SINE Alu 1 320 0 683 274 146 0 chr17 61121689 61121901 -28382652 - MIR SINE MIR -18 244 2 269 326 141 7 chr17 61121923 61122058 -28382495 + MIR SINE MIR 58 210 -52 242 232 54 0 chr17 61122164 61122220 -28382333 + MIR3 SINE MIR 100 158 -50 342 0 0 0 chr17 61122573 61122611 -28381942 + (CA)n Simple_repeat Simple_repeat 2 39 0 2198 143 60 26 chr17 61124063 61124577 -28379976 - MLT2A2 LTR ERVL 0 554 1 431 268 95 48 chr17 61127310 61127478 -28377075 + MIR3 SINE MIR 5 180 -28 22 0 0 0 chr17 61127731 61127753 -28376800 + AT_rich Low_complexity Low_complexity 1 22 0 1387 148 128 44 chr17 61127838 61128182 -28376371 - THE1C LTR MaLR -2 373 1 1410 192 85 3 chr17 61128281 61128598 -28375955 + MER2 DNA MER2_type 1 343 -1 216 0 0 0 chr17 61129546 61129570 -28374983 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1020 126 142 0 chr17 61129700 61129890 -28374663 - L1PA15 LINE L1 -124 6041 5825 3311 203 51 2 chr17 61129894 61130696 -28373857 - L1PA15 LINE L1 -794 5352 4512 2347 250 11 5 chr17 61130695 61131360 -28373193 + L1P LINE L1 2586 3254 -2892 * 180 286 48 48 chr17 61131511 61131595 -28372958 - L2 LINE L2 -9 3263 3180 249 306 148 0 chr17 61131708 61131816 -28372737 + MIR3 SINE MIR 79 202 -6 351 208 30 100 chr17 61132016 61132197 -28372356 - MIR SINE MIR -56 206 34 216 0 0 0 chr17 61132743 61132767 -28371786 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 844 290 111 48 chr17 61133146 61133668 -28370885 + L2 LINE L2 2583 3174 -139 1840 160 20 3 chr17 61133668 61133968 -28370585 - AluJb SINE Alu -7 305 1 844 290 111 48 chr17 61133968 61134116 -28370437 + L2 LINE L2 3174 3311 -2 266 268 89 47 chr17 61134424 61134572 -28369981 + MIR SINE MIR 5 157 -63 3218 136 19 47 chr17 61134828 61135462 -28369091 - L1MB3 LINE L1 -38 6145 5530 457 224 125 52 chr17 61135782 61136189 -28368364 - L1ME4a LINE L1 -123 5998 5562 350 241 78 64 chr17 61136517 61136658 -28367895 - MLT1K LTR MaLR -80 508 366 2239 38 0 4 chr17 61136881 61137143 -28367410 + AluY SINE Alu 28 288 -23 467 234 99 9 chr17 61137143 61137313 -28367240 - MIR SINE MIR -55 153 8 430 302 115 21 chr17 61137512 61137704 -28366849 + MIR SINE MIR 16 225 -37 6583 49 22 10 chr17 61138536 61139416 -28365137 - L1PA6 LINE L1 -11 6143 5254 228 86 0 0 chr17 61140087 61140122 -28364431 + (TAA)n Simple_repeat Simple_repeat 3 37 0 523 310 80 15 chr17 61140132 61140332 -28364221 - MIR SINE MIR -16 246 34 231 330 88 11 chr17 61141724 61141815 -28362738 - L2 LINE L2 -17 3255 3158 209 296 46 13 chr17 61142468 61142542 -28362011 + MIR3 SINE MIR 79 156 -52 594 182 0 58 chr17 61142542 61142663 -28361890 + MER5B DNA MER1_type 1 114 -64 1230 116 6 6 chr17 61142672 61142853 -28361700 - AluSq SINE Alu -11 302 122 2256 137 27 97 chr17 61142872 61143355 -28361198 + MLT2B2 LTR ERVL 67 515 0 2915 212 116 12 chr17 61143355 61143470 -28361083 + L1ME2 LINE L1 4601 4703 -1461 2261 110 72 17 chr17 61143470 61143815 -28360738 + THE1B LTR MaLR 1 364 0 2915 212 116 12 chr17 61143815 61144943 -28359610 + L1ME2 LINE L1 4703 6006 -158 291 28 0 0 chr17 61144943 61144979 -28359574 + (TG)n Simple_repeat Simple_repeat 2 37 0 2915 212 116 12 chr17 61144979 61145082 -28359471 + L1ME2 LINE L1 6006 6097 -67 2084 107 76 0 chr17 61145629 61145946 -28358607 - L1PA15 LINE L1 -2 6163 5823 4300 83 0 11 chr17 61145947 61146559 -28357994 + L1PB1 LINE L1 5543 6147 -4 225 347 60 14 chr17 61146931 61147147 -28357406 - Tigger8 DNA MER2_type -58 608 383 266 333 0 9 chr17 61147357 61147462 -28357091 - Tigger8 DNA MER2_type -516 150 47 342 0 0 0 chr17 61148499 61148537 -28356016 + (ATG)n Simple_repeat Simple_repeat 2 39 0 1303 254 109 37 chr17 61148941 61149426 -28355127 - MLT1G LTR MaLR -6 584 65 243 239 0 0 chr17 61149479 61149546 -28355007 + (TA)n Simple_repeat Simple_repeat 1 67 0 404 219 61 61 chr17 61149743 61149857 -28354696 - MIR SINE MIR -72 190 77 502 339 60 9 chr17 61149929 61150147 -28354406 + MIR SINE MIR 2 230 -32 24 0 0 0 chr17 61150718 61150742 -28353811 + AT_rich Low_complexity Low_complexity 1 24 0 319 257 228 12 chr17 61150826 61150997 -28353556 - L1MC4a LINE L1 -1692 6116 5909 224 57 0 29 chr17 61151000 61151035 -28353518 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 198 360 45 0 chr17 61151517 61151628 -28352925 + L2 LINE L2 2141 2256 -1058 305 258 186 0 chr17 61152607 61152704 -28351849 - MIR SINE MIR -98 164 50 214 358 11 0 chr17 61152751 61152846 -28351707 + CT-rich Low_complexity Low_complexity 2 97 0 282 309 41 32 chr17 61155708 61155831 -28348722 - L2 LINE L2 0 3313 3190 189 147 0 0 chr17 61155844 61155878 -28348675 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 268 328 0 0 chr17 61155881 61155945 -28348608 - L2 LINE L2 -2 3270 3207 246 224 0 35 chr17 61156392 61156450 -28348103 + L2 LINE L2 3256 3311 -2 765 183 50 39 chr17 61158036 61158216 -28346337 + MER5A DNA MER1_type 7 188 -1 1678 174 91 8 chr17 61158303 61158664 -28345889 - MSTD LTR MaLR 0 396 6 2263 112 0 0 chr17 61159065 61159386 -28345167 + AluSx SINE Alu 1 321 0 464 261 143 6 chr17 61159393 61159554 -28344999 + MIR SINE MIR 17 199 -63 414 260 146 38 chr17 61160511 61160664 -28343889 + L1ME4a LINE L1 5743 5878 -243 684 229 66 33 chr17 61160664 61160847 -28343706 + MER5A DNA MER1_type 1 189 0 414 260 146 38 chr17 61160847 61161035 -28343518 + L1ME4a LINE L1 5878 6121 0 688 275 38 19 chr17 61162259 61162470 -28342083 + MIR SINE MIR 48 262 0 180 0 0 0 chr17 61162532 61162552 -28342001 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 207 311 0 16 chr17 61163754 61163815 -28340738 + L3 LINE CR1 1419 1478 -99 425 232 39 155 chr17 61164703 61164910 -28339643 - MIR SINE MIR -60 202 20 1654 169 37 0 chr17 61164924 61165197 -28339356 + AluJo SINE Alu 19 301 -11 219 160 20 40 chr17 61165197 61165238 -28339315 + GA-rich Low_complexity Low_complexity 9 50 0 449 305 121 42 chr17 61165296 61165694 -28338859 - L1ME4a LINE L1 -58 6063 5643 4092 161 34 80 chr17 61166256 61166343 -28338210 - L1MD1 LINE L1 -1 6241 6152 2191 92 0 51 chr17 61166343 61166659 -28337894 - AluSc SINE Alu -9 300 1 4092 161 34 80 chr17 61166659 61167627 -28336926 - L1MD1 LINE L1 -90 6152 5241 2598 111 11 3 chr17 61167627 61167998 -28336555 - THE1C LTR MaLR 0 375 2 4092 161 34 80 chr17 61167998 61168040 -28336513 - L1MD1 LINE L1 -1001 5241 5199 5342 248 30 46 chr17 61168089 61169060 -28335493 - L1ME4a LINE L1 -771 5375 4390 8919 34 0 10 chr17 61169060 61170913 -28333640 + L1PA4 LINE L1 4310 6154 -1 5342 248 30 46 chr17 61170913 61172225 -28332328 - L1ME4a LINE L1 -1756 4390 3129 4222 169 6 4 chr17 61172273 61172977 -28331576 - MER44D DNA MER2_type 0 705 1 2533 69 0 0 chr17 61172999 61173305 -28331248 + AluY SINE Alu 1 306 -5 2361 137 60 21 chr17 61173306 61173412 -28331141 - L1MA9 LINE L1 -33 6279 6179 225 0 0 0 chr17 61173412 61173437 -28331116 + (TG)n Simple_repeat Simple_repeat 2 26 0 2361 137 60 21 chr17 61173437 61173796 -28330757 - L1MA9 LINE L1 -133 6179 5796 186 71 0 0 chr17 61173796 61173824 -28330729 + (TC)n Simple_repeat Simple_repeat 1 28 0 201 39 0 0 chr17 61173824 61173850 -28330703 + (TG)n Simple_repeat Simple_repeat 2 27 0 326 259 176 23 chr17 61173912 61174043 -28330510 + MIR SINE MIR 63 213 -49 458 179 12 0 chr17 61174050 61174134 -28330419 + Tigger4(Zombi) DNA MER2_type 1 85 -2646 * 2751 123 2 11 chr17 61174115 61174572 -28329981 + Tigger4(Zombi) DNA MER2_type 2279 2731 0 870 246 128 48 chr17 61175346 61175538 -28329015 - L2 LINE L2 -6 3307 3132 2231 110 3 0 chr17 61175538 61175838 -28328715 + AluSg1 SINE Alu 1 301 -8 870 246 128 48 chr17 61175838 61175998 -28328555 - L2 LINE L2 -181 3132 2926 569 315 90 6 chr17 61175998 61176176 -28328377 + MER91A DNA MER1_type 1 193 -3 2709 237 43 19 chr17 61176440 61177236 -28327317 - L1ME2 LINE L1 -16 6148 5334 269 301 54 56 chr17 61177245 61177372 -28327181 - MIR SINE MIR -64 144 34 360 234 39 0 chr17 61179824 61179901 -28324652 - MIR3 SINE MIR -10 198 119 27 0 0 0 chr17 61180779 61180806 -28323747 + AT_rich Low_complexity Low_complexity 1 27 0 213 318 32 63 chr17 61181087 61181213 -28323340 - L2 LINE L2 -8 3305 3184 23 68 0 0 chr17 61182569 61182613 -28321940 + AT_rich Low_complexity Low_complexity 1 44 0 458 265 236 0 chr17 61182622 61182827 -28321726 + MIR SINE MIR 2 250 -12 627 320 6 6 chr17 61184407 61184579 -28319974 - MIR3 SINE MIR -27 181 10 213 313 203 30 chr17 61184862 61185407 -28319146 + L2 LINE L2 2408 3051 -221 180 250 36 0 chr17 61185995 61186051 -28318502 + L2 LINE L2 2680 2737 -577 185 175 18 105 chr17 61186284 61186341 -28318212 + L3 LINE CR1 1511 1562 -15 646 323 63 76 chr17 61186414 61186875 -28317678 - L2 LINE L2 -11 3261 2807 279 79 0 0 chr17 61187926 61187964 -28316589 + (TG)n Simple_repeat Simple_repeat 1 38 0 393 329 63 70 chr17 61191330 61191884 -28312669 + L2 LINE L2 2297 2846 -468 196 381 50 14 chr17 61191978 61192117 -28312436 + L2 LINE L2 2907 3050 -222 507 261 211 0 chr17 61192215 61192376 -28312177 + MIR SINE MIR 12 206 -56 1622 218 29 6 chr17 61192390 61192738 -28311815 + MLT1A1 LTR MaLR 10 365 0 2124 146 22 19 chr17 61192784 61193147 -28311406 - THE1B LTR MaLR 0 364 1 566 216 9 26 chr17 61193258 61193374 -28311179 - MER81 DNA DNA 0 114 1 192 301 0 48 chr17 61193383 61193466 -28311087 + L2 LINE L2 3226 3304 -9 519 236 134 32 chr17 61194265 61194422 -28310131 + MIR SINE MIR 6 178 -84 1345 229 34 46 chr17 61195026 61195631 -28308922 - L1 LINE L1 -1068 5078 4467 234 91 0 0 chr17 61195631 61195664 -28308889 + (TA)n Simple_repeat Simple_repeat 1 33 0 1345 229 34 46 chr17 61195664 61196362 -28308191 - L1 LINE L1 -1679 4467 3631 31 44 0 0 chr17 61196688 61196733 -28307820 + AT_rich Low_complexity Low_complexity 1 45 0 539 269 29 25 chr17 61196744 61196986 -28307567 + L1ME1 LINE L1 5761 6003 -163 600 234 6 6 chr17 61197014 61197172 -28307381 + L1MA10 LINE L1 6169 6326 -8 579 297 19 64 chr17 61197177 61197443 -28307110 - MIR SINE MIR -1 261 8 19248 54 5 1 chr17 61197470 61200066 -28304487 - L1PA6 LINE L1 -1074 5072 2468 7129 41 6 0 chr17 61200067 61201115 -28303438 + L1PA6 LINE L1 5080 6141 -13 590 212 30 5 chr17 61201660 61201858 -28302695 - L1M4 LINE L1 -1600 5044 4842 16945 157 11 7 chr17 61201967 61205860 -28298693 - L1PA13 LINE L1 0 6163 2252 5835 203 88 38 chr17 61205873 61207546 -28297007 - L1M4 LINE L1 -4592 2054 270 6913 68 6 0 chr17 61207546 61209112 -28295441 - L1PA8 LINE L1 -6 6166 4594 5835 203 88 38 chr17 61209112 61209390 -28295163 - L1M4 LINE L1 -6376 270 7 290 327 43 15 chr17 61209558 61209690 -28294863 + MIR SINE MIR 33 167 -64 36 23 0 0 chr17 61209709 61209752 -28294801 + AT_rich Low_complexity Low_complexity 1 43 0 236 380 72 0 chr17 61209963 61210158 -28294395 - MIR SINE MIR -1 261 53 6169 87 40 0 chr17 61211084 61212068 -28292485 + L1PA11 LINE L1 5152 6174 0 408 205 16 16 chr17 61212322 61212449 -28292104 + L1MA5 LINE L1 6174 6300 0 585 297 0 26 chr17 61213190 61213345 -28291208 + MIR3 SINE MIR 52 202 -6 218 319 0 0 chr17 61214065 61214137 -28290416 + GA-rich Low_complexity Low_complexity 1 72 0 212 304 125 36 chr17 61215463 61215631 -28288922 - L2 LINE L2 -576 2738 2556 252 309 0 10 chr17 61215772 61215869 -28288684 - MER103 DNA DNA -63 103 8 1853 152 14 10 chr17 61215904 61216200 -28288353 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 61217075 61217103 -28287450 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 628 248 84 42 chr17 61217109 61217323 -28287230 - L2 LINE L2 -34 3279 3057 1253 146 18 9 chr17 61217326 61217657 -28286896 - L1MA7 LINE L1 -265 6026 5595 1258 158 16 20 chr17 61217658 61217912 -28286641 + L1MA6 LINE L1 6043 6295 -5 1101 289 53 32 chr17 61217921 61218439 -28286114 - L2 LINE L2 -247 3066 2539 1601 154 20 20 chr17 61218439 61218737 -28285816 - L1MB7 LINE L1 -9 6175 5878 1101 289 53 32 chr17 61218737 61218771 -28285782 - L2 LINE L2 -774 2539 2507 517 171 0 0 chr17 61218836 61218924 -28285629 - MIR SINE MIR -21 241 154 424 288 51 29 chr17 61219946 61220130 -28284423 - MIR SINE MIR -62 146 3 404 361 25 6 chr17 61220513 61220671 -28283882 - MIR SINE MIR -54 208 48 203 256 0 0 chr17 61221756 61221799 -28282754 + L2 LINE L2 3221 3263 -9 1428 224 69 11 chr17 61222401 61222776 -28281777 + MARNA DNA Mariner 2 398 -188 779 254 151 52 chr17 61222871 61223276 -28281277 + L2 LINE L2 2865 3309 -4 448 168 89 0 chr17 61223472 61223573 -28280980 - L1MA9 LINE L1 -22 6290 6181 1230 157 22 0 chr17 61223576 61223839 -28280714 - L1MA9 LINE L1 -108 6081 5812 524 222 63 8 chr17 61224122 61224248 -28280305 + MIR SINE MIR 32 164 -98 1397 217 127 56 chr17 61224248 61224751 -28279802 - MLT1F LTR MaLR 0 542 4 342 214 10 51 chr17 61224989 61225087 -28279466 + MER3 DNA MER1_type 37 130 -79 5041 159 19 29 chr17 61225087 61225592 -28278961 + L1MA7 LINE L1 4815 5324 -967 2124 101 0 47 chr17 61225592 61225909 -28278644 + AluSc SINE Alu 1 302 -7 5041 159 19 29 chr17 61225909 61226892 -28277661 + L1MA7 LINE L1 5324 6291 0 991 194 38 0 chr17 61226906 61227169 -28277384 + MER33 DNA MER1_type 52 324 0 244 304 68 43 chr17 61228078 61228239 -28276314 - MIR SINE MIR -48 214 50 5952 142 45 65 chr17 61228277 61229533 -28275020 + Tigger3b DNA MER2_type 1 1231 0 315 250 260 21 chr17 61229533 61229716 -28274837 + L3 LINE CR1 1340 1572 -5 21 36 0 0 chr17 61229861 61229889 -28274664 + AT_rich Low_complexity Low_complexity 1 28 0 359 269 0 0 chr17 61230645 61230712 -28273841 + MIR3 SINE MIR 88 154 -54 2412 86 0 0 chr17 61230940 61231243 -28273310 - AluSx SINE Alu -9 303 1 203 200 0 0 chr17 61233921 61233956 -28270597 + A-rich Low_complexity Low_complexity 1 35 0 204 369 57 25 chr17 61236728 61236850 -28267703 + MIR SINE MIR 20 145 -63 695 294 31 5 chr17 61238420 61238614 -28265939 - MIR SINE MIR -1 261 63 22 35 0 0 chr17 61241176 61241205 -28263348 + AT_rich Low_complexity Low_complexity 1 29 0 2437 77 0 3 chr17 61241780 61242080 -28262473 + AluY SINE Alu 1 299 -12 314 251 186 54 chr17 61242328 61242495 -28262058 - L1MC/D LINE L1 -1993 5815 5627 272 316 91 4 chr17 61242495 61242748 -28261805 - L1MC/D LINE L1 -1311 4835 4561 41758 38 2 8 chr17 61242965 61249145 -28255408 + L1PA3 LINE L1 8 6152 -3 264 277 0 30 chr17 61249436 61249537 -28255016 - L1MC/D LINE L1 -2098 4048 3951 278 293 48 40 chr17 61249783 61250155 -28254398 - L1MC/D LINE L1 -2967 3179 2805 378 264 138 43 chr17 61250645 61250790 -28253763 - HAL1 LINE L1 -49 2458 2328 1960 128 52 30 chr17 61250790 61251095 -28253458 - AluSx SINE Alu 0 312 1 378 264 138 43 chr17 61251095 61251298 -28253255 - HAL1 LINE L1 -179 2328 2077 2789 161 47 22 chr17 61251486 61252065 -28252488 + L1MD1 LINE L1 5407 5999 -243 205 311 0 0 chr17 61252455 61252500 -28252053 + L2 LINE L2 3150 3194 -78 303 331 138 11 chr17 61252501 61252682 -28251871 + L2 LINE L2 2848 3051 -221 6124 64 1 0 chr17 61252693 61253509 -28251044 - L1PA8 LINE L1 0 6172 5356 22 0 0 0 chr17 61253684 61253706 -28250847 + AT_rich Low_complexity Low_complexity 1 22 0 248 232 274 21 chr17 61253779 61253874 -28250679 + MER5B DNA MER1_type 1 119 -59 316 279 0 0 chr17 61253874 61253953 -28250600 + L1MC4 LINE L1 6624 6702 -1340 387 0 0 0 chr17 61253974 61254032 -28250521 + (TG)n Simple_repeat Simple_repeat 1 101 0 387 0 0 0 chr17 61254032 61254075 -28250478 + (TG)n Simple_repeat Simple_repeat 2 44 0 2078 88 0 7 chr17 61254115 61254389 -28250164 - AluSg1 SINE Alu -37 272 1 280 369 90 9 chr17 61254465 61254576 -28249977 + L2 LINE L2 3134 3253 -19 474 248 57 14 chr17 61254582 61254723 -28249830 - L2 LINE L2 0 3313 3167 * 725 297 59 8 chr17 61254705 61254944 -28249609 - MIR SINE MIR 0 262 12 225 360 44 7 chr17 61255050 61255186 -28249367 - L3 LINE CR1 -41 1536 1396 465 223 122 80 chr17 61255574 61255762 -28248791 - L3 LINE CR1 -227 1350 1155 216 97 0 0 chr17 61256398 61256429 -28248124 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 419 277 8 54 chr17 61256433 61256563 -28247990 - L2 LINE L2 -6 3266 3143 427 323 32 0 chr17 61256595 61256719 -28247834 - L2 LINE L2 -7 3306 3179 599 290 16 0 chr17 61257781 61257967 -28246586 - LTR33 LTR ERVL 0 521 333 393 192 10 30 chr17 61258039 61258138 -28246415 - LTR33 LTR ERVL -380 141 45 2121 121 3 0 chr17 61258230 61258527 -28246026 + AluSx SINE Alu 1 298 -14 268 24 24 24 chr17 61258682 61258724 -28245829 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 2152 116 3 3 chr17 61258830 61259124 -28245429 + AluSx SINE Alu 1 294 -18 28 0 0 0 chr17 61259243 61259271 -28245282 + AT_rich Low_complexity Low_complexity 1 28 0 770 309 49 4 chr17 61259281 61259527 -28245026 - MIR SINE MIR 0 262 6 55 40 0 0 chr17 61259696 61259772 -28244781 + AT_rich Low_complexity Low_complexity 1 76 0 460 308 28 7 chr17 61260425 61260568 -28243985 + MIR3 SINE MIR 15 160 -48 444 281 46 33 chr17 61260766 61260919 -28243634 + L2 LINE L2 3159 3313 0 381 276 58 39 chr17 61261052 61261208 -28243345 + MIR3 SINE MIR 49 207 -1 193 268 134 24 chr17 61261368 61261450 -28243103 + MIR SINE MIR 26 116 -92 24 0 0 0 chr17 61261895 61261919 -28242634 + AT_rich Low_complexity Low_complexity 1 24 0 13219 191 39 9 chr17 61262148 61262507 -28242046 - L1PB1 LINE L1 0 6867 6520 258 32 0 0 chr17 61262507 61262538 -28242015 + (TA)n Simple_repeat Simple_repeat 2 32 0 13219 191 39 9 chr17 61262538 61262568 -28241985 - L1PB1 LINE L1 -347 6520 6492 229 19 19 74 chr17 61262568 61262622 -28241931 + (TA)n Simple_repeat Simple_repeat 2 52 0 13219 191 39 9 chr17 61262622 61263989 -28240564 - L1PB1 LINE L1 -375 6492 5167 771 92 0 0 chr17 61263989 61264098 -28240455 + (TATTG)n Simple_repeat Simple_repeat 3 111 0 13219 191 39 9 chr17 61264098 61265322 -28239231 - L1PB1 LINE L1 -1700 5167 3981 249 57 0 0 chr17 61265322 61265357 -28239196 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 13219 191 39 9 chr17 61265357 61267802 -28236751 - L1PB1 LINE L1 -2886 3981 1297 1351 254 66 52 chr17 61267888 61268482 -28236071 + L1MC4a LINE L1 5327 5928 -1880 786 248 93 4 chr17 61269948 61270174 -28234379 - MIR SINE MIR 0 262 17 22 0 0 54 chr17 61270571 61270586 -28233967 + AT_rich Low_complexity Low_complexity 1 15 -20 2384 112 0 0 chr17 61270586 61270898 -28233655 - AluSx SINE Alu 0 312 1 22 0 0 54 chr17 61270898 61270919 -28233634 + AT_rich Low_complexity Low_complexity 15 35 0 2426 90 0 0 chr17 61271589 61271888 -28232665 - AluSq SINE Alu -14 299 1 841 209 23 0 chr17 61271992 61272169 -28232384 + L1MDa LINE L1 21 201 -6339 392 211 111 0 chr17 61272487 61272577 -28231976 + MIR SINE MIR 47 146 -116 30 0 0 0 chr17 61272623 61272653 -28231900 + AT_rich Low_complexity Low_complexity 1 30 0 2015 74 34 71 chr17 61272761 61273058 -28231495 - AluSc SINE Alu -23 286 1 1514 131 31 81 chr17 61273066 61273426 -28231127 - L1MA7 LINE L1 -2 6289 5948 7187 174 44 11 chr17 61273426 61275012 -28229541 - L1 LINE L1 -1234 4736 3098 1940 165 36 32 chr17 61275016 61275558 -28228995 + MLT2A2 LTR ERVL 1 547 -7 663 224 78 14 chr17 61275562 61275781 -28228772 - L1 LINE L1 -2875 3095 2863 4805 157 4 15 chr17 61275794 61276386 -28228167 - L1P LINE L1 -1701 4445 3865 1616 102 165 12 chr17 61276386 61276641 -28227912 - AluSg1 SINE Alu -15 294 1 4805 157 4 15 chr17 61276641 61276960 -28227593 - L1P LINE L1 -2281 3865 3544 * 8873 131 17 25 chr17 61276949 61277401 -28227152 + L1MA2 LINE L1 3539 3993 -2311 1728 197 3 3 chr17 61277401 61277700 -28226853 + AluJb SINE Alu 1 299 -13 8873 131 17 25 chr17 61277700 61280031 -28224522 + L1MA2 LINE L1 3993 6300 -4 533 309 48 24 chr17 61280161 61280456 -28224097 - L1 LINE L1 -5589 302 1 681 248 26 7 chr17 61281293 61281446 -28223107 - MIR3 SINE MIR -41 167 12 2338 91 0 3 chr17 61281863 61282161 -28222392 + AluSq SINE Alu 1 297 -16 1415 163 40 92 chr17 61282175 61282500 -28222053 + AluJo SINE Alu 1 308 -4 234 356 45 45 chr17 61282594 61282796 -28221757 + L2 LINE L2 2776 2977 -337 228 254 17 0 chr17 61282811 61282870 -28221683 + (TGAA)n Simple_repeat Simple_repeat 2 61 0 2585 38 0 25 chr17 61283352 61283671 -28220882 - AluY SINE Alu 0 311 1 429 188 0 0 chr17 61285099 61285184 -28219369 + (CA)n Simple_repeat Simple_repeat 1 85 0 190 273 156 13 chr17 61286295 61286372 -28218181 + L2 LINE L2 2949 3036 -236 327 279 170 20 chr17 61287006 61287153 -28217400 + MIR SINE MIR 24 192 -70 478 334 97 48 chr17 61287999 61288627 -28215926 + L2 LINE L2 2595 3264 -8 267 226 0 0 chr17 61289039 61289092 -28215461 - L2 LINE L2 0 3313 3261 577 260 19 47 chr17 61290437 61290609 -28213944 + MIR SINE MIR 28 195 -60 2411 95 0 3 chr17 61290614 61290919 -28213634 + AluSq SINE Alu 1 304 -9 2191 121 3 7 chr17 61291118 61291425 -28213128 - AluSx SINE Alu -6 306 1 302 283 261 0 chr17 61291699 61291883 -28212670 - L2 LINE L2 -4 3309 3078 595 196 158 1 chr17 61292016 61292279 -28212274 - MER58B DNA MER1_type 0 341 1 437 347 42 56 chr17 61292279 61292564 -28211989 - L2 LINE L2 -514 2800 2520 1249 163 158 53 chr17 61292871 61293164 -28211389 + L1MA9 LINE L1 5831 6178 -134 342 0 0 0 chr17 61293164 61293202 -28211351 + (CA)n Simple_repeat Simple_repeat 1 38 0 1249 163 158 53 chr17 61293202 61293306 -28211247 + L1MA9 LINE L1 6178 6270 -42 676 319 61 58 chr17 61293346 61293831 -28210722 - L2 LINE L2 -3 3269 2782 22 56 0 0 chr17 61295051 61295087 -28209466 + AT_rich Low_complexity Low_complexity 1 36 0 262 231 0 15 chr17 61295604 61295669 -28208884 + MER63C DNA MER1_type 1 64 -866 1729 181 54 60 chr17 61295715 61296106 -28208447 + MER63C DNA MER1_type 60 452 -608 203 86 0 29 chr17 61296106 61296141 -28208412 + (TA)n Simple_repeat Simple_repeat 2 35 0 2490 86 6 8 chr17 61296142 61296501 -28208052 + L1PB1 LINE L1 5794 6151 0 1729 181 54 60 chr17 61296501 61296572 -28207981 + MER63C DNA MER1_type 451 521 -409 863 105 0 0 chr17 61296597 61296711 -28207842 + AluSg/x SINE Alu 181 294 -18 207 188 0 0 chr17 61297042 61297090 -28207463 + GA-rich Low_complexity Low_complexity 2 49 0 396 322 63 60 chr17 61297897 61298229 -28206324 - L2 LINE L2 -8 3264 2932 2173 110 0 41 chr17 61299205 61299522 -28205031 + AluSq SINE Alu 1 304 -9 195 100 0 0 chr17 61300423 61300453 -28204100 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 306 0 0 0 chr17 61300637 61300671 -28203882 + (TG)n Simple_repeat Simple_repeat 2 35 0 906 181 7 0 chr17 61301231 61301380 -28203173 - AluJb SINE Alu -19 293 144 219 167 0 0 chr17 61302593 61302635 -28201918 + (CA)n Simple_repeat Simple_repeat 1 42 0 335 255 16 38 chr17 61304876 61305045 -28199508 + L1MC4a LINE L1 5689 5818 -303 292 273 18 27 chr17 61305085 61305195 -28199358 + HAL1 LINE L1 2366 2474 -33 245 304 20 29 chr17 61305772 61305874 -28198679 + MIR SINE MIR 8 108 -154 1046 139 0 46 chr17 61305874 61306047 -28198506 + FRAM SINE Alu 1 164 -12 377 296 26 7 chr17 61306557 61306709 -28197844 + L1ME LINE L1 5525 5679 -442 206 311 56 11 chr17 61307099 61307189 -28197364 - MIR SINE MIR -1 261 168 454 303 14 14 chr17 61307260 61307402 -28197151 - MIR SINE MIR -10 252 111 223 284 45 45 chr17 61307429 61307517 -28197036 - MIR SINE MIR -137 125 38 21 36 0 0 chr17 61308374 61308402 -28196151 + AT_rich Low_complexity Low_complexity 1 28 0 2153 99 3 3 chr17 61309308 61309590 -28194963 + AluSx SINE Alu 23 304 -8 2074 151 0 6 chr17 61309602 61309913 -28194640 + AluSx SINE Alu 1 309 -3 193 273 0 0 chr17 61309913 61309957 -28194596 - MIR SINE MIR -117 145 102 198 279 66 16 chr17 61310128 61310189 -28194364 + MIR SINE MIR 24 87 -121 616 351 38 4 chr17 61310371 61310610 -28193943 - MIR SINE MIR -11 251 5 192 158 0 0 chr17 61312023 61312061 -28192492 + CT-rich Low_complexity Low_complexity 3 40 0 250 309 10 31 chr17 61312347 61312444 -28192109 - MIR SINE MIR -151 111 17 721 142 0 47 chr17 61312817 61312944 -28191609 + FRAM SINE Alu 54 174 -2 386 241 110 7 chr17 61313786 61313931 -28190622 - MER103 DNA DNA -1 165 6 36 23 0 0 chr17 61314107 61314150 -28190403 + AT_rich Low_complexity Low_complexity 1 43 0 536 283 38 38 chr17 61314225 61314409 -28190144 + MIR SINE MIR 53 236 -26 400 290 243 22 chr17 61315053 61315370 -28189183 - MLT1I LTR MaLR 0 409 23 207 176 0 39 chr17 61315413 61315464 -28189089 + T-rich Low_complexity Low_complexity 6 54 0 773 223 26 42 chr17 61315490 61315683 -28188870 + MIR SINE MIR 31 220 -42 5242 265 91 30 chr17 61315697 61317995 -28186558 - HAL1 LINE L1 -69 2438 1 272 170 0 19 chr17 61318464 61318517 -28186036 + L2 LINE L2 3262 3313 0 271 304 78 0 chr17 61318513 61318615 -28185938 + MIR SINE MIR 56 165 -97 * 269 250 125 25 chr17 61318663 61318783 -28185770 + L1ME4a LINE L1 5989 6120 -1 2339 79 20 0 chr17 61319055 61319359 -28185194 - AluSg SINE Alu 0 310 1 224 229 0 66 chr17 61320154 61320215 -28184338 + MIR3 SINE MIR 146 202 -6 414 276 145 7 chr17 61320893 61321038 -28183515 + MIR3 SINE MIR 32 196 -12 2048 124 0 0 chr17 61321791 61322074 -28182479 - AluSx SINE Alu -29 283 1 765 305 171 47 chr17 61322477 61322866 -28181687 + L2 LINE L2 902 1241 -2073 1527 177 12 0 chr17 61322866 61323145 -28181408 + AluJb SINE Alu 30 311 0 765 305 171 47 chr17 61323145 61323641 -28180912 + L2 LINE L2 1241 1899 -1415 235 196 125 0 chr17 61323646 61323702 -28180851 + MER69 DNA AcHobo 1 63 -2463 558 168 24 8 chr17 61323862 61323987 -28180566 + MER69 DNA AcHobo 2393 2519 -7 731 293 73 57 chr17 61324015 61324476 -28180077 + L2 LINE L2 1961 3272 0 2339 90 3 0 chr17 61324976 61325277 -28179276 + AluSp SINE Alu 1 302 -11 262 267 140 63 chr17 61325409 61325630 -28178923 + L2 LINE L2 2605 2842 -472 747 299 23 9 chr17 61325789 61326010 -28178543 - MIR SINE MIR -12 250 27 296 376 57 18 chr17 61327034 61327313 -28177240 - L2 LINE L2 -1 3271 2982 287 280 76 53 chr17 61327438 61327570 -28176983 - MIR SINE MIR -83 179 45 468 241 54 60 chr17 61327588 61327754 -28176799 - MER63A DNA MER1_type 0 210 46 219 288 0 17 chr17 61328153 61328212 -28176341 - L3 LINE CR1 -1426 151 94 1908 126 16 45 chr17 61329488 61329798 -28174755 + AluSx SINE Alu 1 301 -11 183 246 0 0 chr17 61329902 61329959 -28174594 + (TG)n Simple_repeat Simple_repeat 2 58 0 361 320 4 69 chr17 61329963 61330061 -28174492 - MIR SINE MIR -50 212 109 2114 126 10 0 chr17 61330061 61330533 -28174020 + AluSx SINE Alu 1 475 0 361 320 4 69 chr17 61330533 61330574 -28173979 - MIR SINE MIR -153 109 67 528 220 33 66 chr17 61330574 61330756 -28173797 + MER69A DNA AcHobo 1 176 -1 361 320 4 69 chr17 61330756 61330839 -28173714 - MIR SINE MIR -195 67 6 196 203 43 58 chr17 61330977 61331046 -28173507 - MIR3 SINE MIR -135 73 6 229 305 0 0 chr17 61331878 61331937 -28172616 + C-rich Low_complexity Low_complexity 6 64 0 660 234 142 5 chr17 61332217 61332422 -28172131 + MIR SINE MIR 30 262 0 5020 86 19 9 chr17 61332453 61333150 -28171403 - L1PA10 LINE L1 -3 6165 5462 222 273 134 51 chr17 61333685 61333901 -28170652 - MIR SINE MIR -27 235 2 2557 179 8 0 chr17 61334230 61334721 -28169832 + L1MB7 LINE L1 5671 6165 -19 392 267 43 19 chr17 61334767 61334928 -28169625 - Charlie8 DNA MER1_type -2182 235 71 451 281 92 103 chr17 61335210 61335570 -28168983 - L2 LINE L2 -1 3271 2916 478 287 39 16 chr17 61335726 61335855 -28168698 + L2 LINE L2 3141 3272 0 2050 121 52 0 chr17 61336044 61336334 -28168219 + AluSx SINE Alu 1 305 -7 750 343 139 35 chr17 61336506 61337392 -28167161 - L3 LINE CR1 -580 997 20 333 302 66 0 chr17 61337956 61338062 -28166491 + L2 LINE L2 3158 3270 -2 985 123 6 0 chr17 61338288 61338450 -28166103 - L1MA7 LINE L1 -6 6285 6123 1775 139 201 8 chr17 61338520 61338879 -28165674 - MSTA LTR MaLR 0 428 1 195 100 0 0 chr17 61340333 61340363 -28164190 + (T)n Simple_repeat Simple_repeat 1 30 0 2309 119 3 0 chr17 61340700 61341012 -28163541 - AluSq SINE Alu 0 313 1 284 167 30 0 chr17 61341562 61341628 -28162925 + A-rich Low_complexity Low_complexity 2 69 0 315 0 0 0 chr17 61343774 61343809 -28160744 + (TG)n Simple_repeat Simple_repeat 1 35 0 198 0 0 0 chr17 61343968 61343990 -28160563 + (A)n Simple_repeat Simple_repeat 1 22 0 312 27 0 0 chr17 61344375 61344412 -28160141 + (CA)n Simple_repeat Simple_repeat 2 38 0 290 222 0 12 chr17 61345391 61345472 -28159081 + CT-rich Low_complexity Low_complexity 1 80 0 243 382 71 53 chr17 61346341 61346776 -28157777 - L2 LINE L2 -19 3253 2811 467 318 82 35 chr17 61346966 61347281 -28157272 - L2 LINE L2 -833 2481 2152 1306 231 192 20 chr17 61347618 61348129 -28156424 - L2 LINE L2 0 3313 2719 36 0 0 0 chr17 61348164 61348200 -28156353 + AT_rich Low_complexity Low_complexity 1 36 0 291 130 0 0 chr17 61348200 61348246 -28156307 - MER103 DNA DNA -115 51 6 999 243 0 0 chr17 61348320 61348509 -28156044 - MER5A DNA MER1_type 0 189 1 635 350 68 58 chr17 61350114 61351063 -28153490 - L2 LINE L2 -18 3254 2305 666 270 117 17 chr17 61351446 61351676 -28152877 - MIR SINE MIR -7 255 3 23 0 0 0 chr17 61351979 61352002 -28152551 + AT_rich Low_complexity Low_complexity 1 23 0 240 364 40 0 chr17 61354813 61354938 -28149615 + MIR SINE MIR 24 157 -63 292 322 98 35 chr17 61354967 61355110 -28149443 - L2 LINE L2 0 3272 3121 217 320 74 66 chr17 61355305 61355561 -28148992 - L2 LINE L2 -343 2971 2714 675 233 17 51 chr17 61355768 61355944 -28148609 + MIR SINE MIR 80 249 -13 632 140 0 19 chr17 61356377 61356484 -28148069 + FLAM_C SINE Alu 39 143 0 519 326 21 0 chr17 61356500 61356644 -28147909 + MIR3 SINE MIR 54 200 -8 1254 199 118 92 chr17 61357131 61357623 -28146930 - MLT1D LTR MaLR 0 505 1 187 284 200 21 chr17 61357757 61357852 -28146701 - L2 LINE L2 0 3272 3161 469 216 35 5 chr17 61358515 61358648 -28145905 - MIR3 SINE MIR -9 199 63 433 262 45 74 chr17 61359210 61359436 -28145117 - MIR SINE MIR -1 261 42 534 264 57 9 chr17 61360767 61360937 -28143616 + MIR3 SINE MIR 2 180 -63 323 307 44 9 chr17 61361355 61361469 -28143084 - L2 LINE L2 -219 3053 2936 574 324 268 21 chr17 61361629 61362809 -28141744 - L2 LINE L2 -148 3165 1705 387 0 0 0 chr17 61364203 61364246 -28140307 + (TA)n Simple_repeat Simple_repeat 1 43 0 1073 142 12 0 chr17 61365373 61365542 -28139011 - AluSq SINE Alu -13 300 130 950 104 0 0 chr17 61365668 61365793 -28138760 - AluSq SINE Alu -188 125 1 272 333 19 29 chr17 61365851 61365956 -28138597 - MIR SINE MIR -89 119 16 253 299 11 23 chr17 61366146 61366233 -28138320 - L2 LINE L2 -1 3271 3186 279 333 11 11 chr17 61366382 61366469 -28138084 - L2 LINE L2 -70 3202 3116 1543 201 138 42 chr17 61366801 61366858 -28137695 + MLT1D LTR MaLR 15 65 -440 191 86 0 29 chr17 61366858 61366893 -28137660 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1630 53 0 0 chr17 61366894 61367082 -28137471 - L1PA5 LINE L1 -11 6143 5956 1543 201 138 42 chr17 61367082 61367470 -28137083 + MLT1D LTR MaLR 64 505 0 284 371 148 5 chr17 61367630 61367840 -28136713 + MIR SINE MIR 23 262 0 454 319 60 34 chr17 61368541 61368839 -28135714 + L2 LINE L2 2926 3231 -82 248 320 141 15 chr17 61368970 61369176 -28135377 + L2 LINE L2 2605 2836 -478 334 200 108 23 chr17 61369189 61369319 -28135234 - L1MD3 LINE L1 0 7995 7855 279 228 15 24 chr17 61369667 61369752 -28134801 - L1MC/D LINE L1 -297 5824 5760 972 260 68 64 chr17 61369752 61370249 -28134304 - MLT1J LTR MaLR -2 509 11 869 195 53 6 chr17 61370832 61371001 -28133552 - MER45A DNA AcHobo 0 178 2 480 285 36 7 chr17 61373582 61373719 -28130834 - MIR3 SINE MIR -15 193 53 191 125 25 0 chr17 61374614 61374654 -28129899 + T-rich Low_complexity Low_complexity 2 42 0 276 30 0 0 chr17 61376833 61376866 -28127687 + (TG)n Simple_repeat Simple_repeat 1 33 0 180 0 0 0 chr17 61379732 61379752 -28124801 + (A)n Simple_repeat Simple_repeat 1 20 0 211 107 0 0 chr17 61380534 61380562 -28123991 + MER91B DNA MER1_type 32 59 -131 407 296 35 21 chr17 61381365 61381507 -28123046 - MIR SINE MIR -109 153 10 250 253 12 12 chr17 61381754 61381837 -28122716 + (CA)n Simple_repeat Simple_repeat 2 84 0 564 269 119 30 chr17 61382708 61382909 -28121644 + MIR SINE MIR 8 226 -36 22 80 0 0 chr17 61383223 61383273 -28121280 + AT_rich Low_complexity Low_complexity 1 50 0 347 268 144 0 chr17 61383537 61383634 -28120919 + MER81 DNA DNA 1 111 -3 198 118 0 0 chr17 61384357 61384391 -28120162 + (CA)n Simple_repeat Simple_repeat 2 35 0 3190 34 3 0 chr17 61384525 61384901 -28119652 + L1PA5 LINE L1 5784 6160 0 2378 103 0 0 chr17 61384964 61385275 -28119278 + AluY SINE Alu 1 311 0 236 250 69 78 chr17 61385356 61385472 -28119081 + L1M1 LINE L1 5644 5758 -547 229 313 160 7 chr17 61385443 61385593 -28118960 + L1MC/D LINE L1 5728 5900 -1908 * 312 27 0 0 chr17 61385651 61385685 -28118868 + (TG)n Simple_repeat Simple_repeat 1 71 0 312 27 0 0 chr17 61385685 61385722 -28118831 + (TG)n Simple_repeat Simple_repeat 2 38 0 239 337 20 10 chr17 61386258 61386359 -28118194 + L3b LINE CR1 1394 1495 -88 465 270 138 128 chr17 61386517 61387197 -28117356 + L3 LINE CR1 641 1333 -244 2968 152 104 14 chr17 61387197 61387716 -28116837 + MLT1F1 LTR MaLR 2 567 0 465 270 138 128 chr17 61387716 61387903 -28116650 + L3 LINE CR1 1333 1517 -60 497 281 12 43 chr17 61389782 61389946 -28114607 - MIR SINE MIR -74 188 30 252 271 83 31 chr17 61390010 61390106 -28114447 + MIR SINE MIR 81 181 -81 181 225 38 38 chr17 61391687 61391767 -28112786 + MIR SINE MIR 55 134 -74 366 245 135 37 chr17 61391772 61391935 -28112618 - MIR SINE MIR 0 262 84 426 218 59 0 chr17 61391937 61392038 -28112515 + MIR SINE MIR 137 243 -19 217 209 158 102 chr17 61392080 61392257 -28112296 + L2 LINE L2 3085 3271 -1 222 207 0 0 chr17 61392621 61392679 -28111874 + (CA)n Simple_repeat Simple_repeat 1 58 0 586 252 0 0 chr17 61392937 61393060 -28111493 - L2 LINE L2 -1 3312 3190 453 180 0 0 chr17 61393542 61393631 -28110922 + CT-rich Low_complexity Low_complexity 2 90 0 187 288 83 11 chr17 61393712 61393850 -28110703 - MIR SINE MIR -24 238 45 222 293 10 71 chr17 61394399 61394498 -28110055 - L2 LINE L2 -8 3305 3213 915 249 82 20 chr17 61394683 61394928 -28109625 + MIR SINE MIR 2 261 -1 500 281 11 99 chr17 61395660 61395751 -28108802 - MIR SINE MIR 0 262 165 859 154 0 0 chr17 61395751 61395874 -28108679 - FLAM_A SINE Alu -10 123 1 500 281 11 99 chr17 61395874 61396045 -28108508 - MIR SINE MIR -97 165 23 1700 192 6 6 chr17 61396864 61397201 -28107352 + AluJo SINE Alu 1 312 0 454 270 0 9 chr17 61397826 61397937 -28106616 + MLT1K LTR MaLR 2 111 -477 845 237 89 25 chr17 61397947 61398183 -28106370 - MIR SINE MIR 0 262 12 457 314 218 26 chr17 61398183 61398569 -28105984 + MLT1K LTR MaLR 107 566 -22 1946 119 28 7 chr17 61398884 61399169 -28105384 + AluSx SINE Alu 5 295 -17 566 283 194 14 chr17 61399300 61399646 -28104907 - LTR67 LTR ERVL -19 538 131 1001 250 120 58 chr17 61399978 61400506 -28104047 - MLT1H1 LTR MaLR 0 555 1 417 309 52 43 chr17 61400519 61400759 -28103794 - L2 LINE L2 -189 3083 2837 2269 124 0 0 chr17 61400759 61401065 -28103488 + AluSx SINE Alu 1 306 -6 417 309 52 43 chr17 61401065 61401152 -28103401 - L2 LINE L2 -435 2837 2752 428 326 14 7 chr17 61401305 61401443 -28103110 - L2 LINE L2 -303 3010 2872 578 247 45 13 chr17 61401665 61401869 -28102684 + L1ME LINE L1 5556 5777 -385 21 36 0 0 chr17 61402128 61402156 -28102397 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr17 61402423 61402449 -28102104 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 1703 157 35 21 chr17 61402497 61402784 -28101769 + AluJb SINE Alu 6 296 -16 2254 116 3 6 chr17 61403495 61403806 -28100747 - AluSx SINE Alu -2 310 1 279 244 134 61 chr17 61403926 61404090 -28100463 + L2 LINE L2 3074 3249 -23 1533 211 146 25 chr17 61404199 61404630 -28099923 - MLT1D LTR MaLR 0 505 23 2329 52 0 0 chr17 61404721 61404990 -28099563 - AluY SINE Alu -13 298 30 207 100 0 0 chr17 61405011 61405041 -28099512 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 478 201 24 12 chr17 61406478 61406642 -28097911 + GA-rich Low_complexity Low_complexity 4 169 0 303 250 48 71 chr17 61406672 61406756 -28097797 + L2 LINE L2 3160 3241 -31 417 263 194 11 chr17 61406913 61407099 -28097454 - MIR SINE MIR -6 256 37 204 351 27 27 chr17 61407400 61407511 -28097042 + L2 LINE L2 3164 3274 -39 332 227 93 0 chr17 61408012 61408087 -28096466 - MIR SINE MIR -91 117 36 441 304 6 61 chr17 61408366 61408547 -28096006 + MIR3 SINE MIR 12 182 -26 1965 129 3 3 chr17 61408738 61409032 -28095521 + AluSg SINE Alu 1 294 -16 1277 391 0 26 chr17 61409044 61409351 -28095202 + AluJb SINE Alu 1 299 -13 512 108 0 0 chr17 61409279 61409353 -28095200 + AluJ/FRAM SINE Alu 228 301 -11 373 328 17 0 chr17 61410042 61410158 -28094395 + L2 LINE L2 3195 3312 -1 219 231 0 0 chr17 61410156 61410195 -28094358 + polypurine Low_complexity Low_complexity 3 41 0 * 1609 265 69 9 chr17 61410196 61410633 -28093920 + LTR16B LTR ERVL 2 464 0 587 316 38 11 chr17 61410791 61411058 -28093495 + LTR33 LTR ERVL 28 277 -246 216 0 0 0 chr17 61411223 61411247 -28093306 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 421 234 88 93 chr17 61411398 61411527 -28093026 + MLT1H LTR MaLR 346 475 -74 1844 158 3 3 chr17 61411527 61411830 -28092723 + AluSx SINE Alu 1 303 -9 421 234 88 93 chr17 61411830 61411905 -28092648 + MLT1H LTR MaLR 475 549 0 1921 145 178 8 chr17 61412377 61412743 -28091810 - MSTA LTR MaLR 0 428 1 822 282 71 7 chr17 61413016 61413497 -28091056 - MLT1H1 LTR MaLR -6 549 1 1434 266 84 43 chr17 61413570 61414078 -28090475 + Charlie7 DNA MER1_type 68 608 -2004 1568 198 7 0 chr17 61414078 61414376 -28090177 + AluSx SINE Alu 1 300 -12 1434 266 84 43 chr17 61414376 61414495 -28090058 + Charlie7 DNA MER1_type 608 721 -1891 399 218 34 78 chr17 61414487 61414693 -28089860 + Charlie7 DNA MER1_type 2416 2612 0 * 415 274 44 7 chr17 61415197 61415332 -28089221 + L1ME4a LINE L1 5548 5687 -2121 683 186 8 0 chr17 61415428 61415546 -28089007 + FLAM_A SINE Alu 1 119 -14 21 0 0 0 chr17 61415559 61415580 -28088973 + AT_rich Low_complexity Low_complexity 1 21 0 469 276 29 91 chr17 61415918 61416302 -28088251 + L1ME4a LINE L1 5688 6047 -74 539 253 29 157 chr17 61416764 61417076 -28087477 + L2 LINE L2 3001 3272 0 351 293 64 120 chr17 61417316 61417571 -28086982 - MLT1K LTR MaLR -108 480 249 1748 161 21 0 chr17 61417571 61417862 -28086691 + AluJo SINE Alu 1 297 -15 351 293 64 120 chr17 61417862 61417965 -28086588 - MLT1K LTR MaLR -339 249 142 417 282 112 29 chr17 61419240 61419446 -28085107 + MIR SINE MIR 28 250 -12 234 345 17 17 chr17 61419869 61419988 -28084565 - MIR3 SINE MIR -52 156 38 945 144 72 0 chr17 61420047 61420214 -28084339 + MER82 DNA MER2_type 10 188 -465 2709 169 8 46 chr17 61420215 61420712 -28083841 + MLT2B1 LTR ERVL 3 480 -40 219 114 0 0 chr17 61420724 61420759 -28083794 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr17 61420794 61420815 -28083738 + AT_rich Low_complexity Low_complexity 1 21 0 303 105 18 18 chr17 61420829 61420886 -28083667 + MLT2B1 LTR ERVL 464 520 0 725 268 40 22 chr17 61420893 61421117 -28083436 + HERVL-B1 LTR ERVL 4 231 -5423 985 159 80 0 chr17 61421120 61421271 -28083282 + MER21B LTR ERV1 328 490 -373 28446 151 27 39 chr17 61421628 61422352 -28082201 + HERVL-B1 LTR ERVL 239 970 -4794 7117 111 47 33 chr17 61422352 61423037 -28081516 + Tigger3b DNA MER2_type 1 712 -2316 1949 133 36 0 chr17 61423037 61423338 -28081215 + AluSx SINE Alu 1 312 0 7117 111 47 33 chr17 61423338 61423866 -28080687 + Tigger3b DNA MER2_type 712 1231 0 28446 151 27 39 chr17 61423866 61427997 -28076556 + HERVL-B1 LTR ERVL 970 5039 -725 794 203 29 38 chr17 61427997 61428212 -28076341 + MLT2B1 LTR ERVL 208 463 -57 216 0 0 0 chr17 61428212 61428236 -28076317 + (TCTA)n Simple_repeat Simple_repeat 1 24 0 794 203 29 38 chr17 61428236 61428294 -28076259 + MLT2B1 LTR ERVL 463 520 0 * 1930 233 78 14 chr17 61428294 61428736 -28075817 + MER82 DNA MER2_type 183 653 0 566 210 34 0 chr17 61428736 61428853 -28075700 + MER94 DNA DNA 14 134 0 329 343 116 35 chr17 61430470 61430668 -28073885 - MIR SINE MIR -45 217 4 234 318 9 37 chr17 61431478 61431585 -28072968 + MIR SINE MIR 46 149 -113 414 292 77 18 chr17 61431711 61431879 -28072674 - MIR SINE MIR -51 211 34 199 204 0 20 chr17 61432186 61432235 -28072318 - L2 LINE L2 0 3313 3266 557 248 120 12 chr17 61433292 61433534 -28071019 + L1ME LINE L1 5485 5752 -369 685 146 0 77 chr17 61434816 61434946 -28069607 + FLAM_A SINE Alu 1 120 -13 273 167 156 73 chr17 61434995 61435091 -28069462 + L2 LINE L2 3210 3313 0 228 204 161 43 chr17 61435376 61435469 -28069084 + MIR SINE MIR 16 119 -89 416 297 11 54 chr17 61435898 61436083 -28068470 + MIR SINE MIR 86 262 0 1903 139 0 16 chr17 61436390 61436699 -28067854 + AluSx SINE Alu 1 304 -8 1468 185 17 13 chr17 61436741 61437039 -28067514 - AluJb SINE Alu -13 299 1 478 319 28 0 chr17 61437041 61437182 -28067371 + MIR SINE MIR 20 164 -98 275 231 0 31 chr17 61438282 61438347 -28066206 + CT-rich Low_complexity Low_complexity 4 66 0 4202 146 21 17 chr17 61440042 61440187 -28064366 - L1MB3 LINE L1 -1 6182 6039 2630 121 0 0 chr17 61440187 61440551 -28064002 + THE1B LTR MaLR 1 364 0 4202 146 21 17 chr17 61440551 61441157 -28063396 - L1MB3 LINE L1 -144 6039 5428 473 323 198 0 chr17 61441504 61441696 -28062857 + MIR SINE MIR 21 250 -12 1732 163 3 3 chr17 61441744 61442047 -28062506 + AluJb SINE Alu 1 303 0 211 306 16 16 chr17 61443455 61443517 -28061036 - L2 LINE L2 -19 3294 3233 196 206 73 29 chr17 61443551 61443619 -28060934 - L2 LINE L2 -1109 2205 2135 22 35 0 0 chr17 61444875 61444904 -28059649 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr17 61445022 61445060 -28059493 + AT_rich Low_complexity Low_complexity 1 38 0 227 276 16 0 chr17 61445683 61445745 -28058808 + MIR SINE MIR 104 165 -58 215 231 0 0 chr17 61446038 61446077 -28058476 + (CA)n Simple_repeat Simple_repeat 1 39 0 2470 62 7 0 chr17 61446584 61446927 -28057626 - AluY SINE Alu 0 345 1 2104 132 0 0 chr17 61447263 61447574 -28056979 + AluSx SINE Alu 1 311 -1 598 65 79 0 chr17 61448241 61448380 -28056173 + (TG)n Simple_repeat Simple_repeat 2 151 0 211 281 0 18 chr17 61448403 61448460 -28056093 + (TG)n Simple_repeat Simple_repeat 2 57 0 324 0 0 0 chr17 61448794 61448830 -28055723 + (TG)n Simple_repeat Simple_repeat 1 36 0 233 258 204 21 chr17 61449826 61449919 -28054634 - MIR3 SINE MIR -90 118 9 427 290 78 31 chr17 61450617 61450810 -28053743 - MIR SINE MIR -36 226 25 1815 117 0 64 chr17 61451907 61452205 -28052348 - AluSx SINE Alu -33 279 1 24 77 0 0 chr17 61453241 61453293 -28051260 + GC_rich Low_complexity Low_complexity 1 52 0 288 77 0 0 chr17 61453502 61453541 -28051012 + (TG)n Simple_repeat Simple_repeat 2 40 0 351 65 0 0 chr17 61453942 61453988 -28050565 + (CCG)n Simple_repeat Simple_repeat 2 47 0 189 0 0 0 chr17 61454299 61454320 -28050233 + (CCG)n Simple_repeat Simple_repeat 3 23 0 21 0 0 0 chr17 61455058 61455079 -28049474 + GC_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr17 61455609 61455635 -28048918 + (T)n Simple_repeat Simple_repeat 1 26 0 204 255 0 0 chr17 61455788 61455835 -28048718 + A-rich Low_complexity Low_complexity 1 47 0 262 262 0 12 chr17 61457277 61457361 -28047192 + CT-rich Low_complexity Low_complexity 1 83 0 25 0 0 0 chr17 61458237 61458262 -28046291 + GC_rich Low_complexity Low_complexity 1 25 0 396 242 152 8 chr17 61459266 61459398 -28045155 - MIR3 SINE MIR -11 197 47 207 219 0 0 chr17 61459426 61459467 -28045086 + T-rich Low_complexity Low_complexity 1 41 0 402 289 230 5 chr17 61459561 61459748 -28044805 - MIR SINE MIR -14 248 20 1509 164 52 0 chr17 61459981 61460249 -28044304 + AluJo SINE Alu 1 282 -30 770 138 26 0 chr17 61460133 61460250 -28044303 + AluJo/FRAM SINE Alu 164 310 0 211 37 0 0 chr17 61460250 61460277 -28044276 + (TAAA)n Simple_repeat Simple_repeat 1 84 0 1425 226 126 60 chr17 61460719 61461237 -28043316 - MLT1H1 LTR MaLR 0 555 4 2114 99 0 33 chr17 61461416 61461719 -28042834 + AluSx SINE Alu 1 293 -19 199 316 35 0 chr17 61461989 61462046 -28042507 + L2 LINE L2 3251 3309 -4 186 43 0 0 chr17 61462135 61462158 -28042395 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 517 275 6 64 chr17 61462295 61462466 -28042087 + MER102b DNA MER1_type 181 341 0 333 339 101 0 chr17 61462584 61462752 -28041801 - MIR3 SINE MIR -5 203 19 363 257 114 0 chr17 61462830 61462935 -28041618 + L2 LINE L2 3156 3272 0 264 250 0 0 chr17 61462946 61463010 -28041543 - MIR SINE MIR -120 142 79 398 298 50 16 chr17 61463303 61463424 -28041129 - MIR SINE MIR -117 145 21 535 298 213 15 chr17 61463473 61464035 -28040518 + L2 LINE L2 2626 3313 0 321 218 109 18 chr17 61464580 61464690 -28039863 - MIR SINE MIR -50 212 93 543 227 93 27 chr17 61464747 61464897 -28039656 + MIR SINE MIR 21 180 -82 283 278 38 53 chr17 61465434 61465567 -28038986 - MIR3 SINE MIR -12 196 66 336 316 130 56 chr17 61465929 61466668 -28037885 + L2 LINE L2 2233 3036 -236 515 296 139 14 chr17 61466727 61466943 -28037610 - MIR SINE MIR 0 262 20 261 367 60 13 chr17 61466990 61467140 -28037413 + L2 LINE L2 3108 3264 -8 250 265 118 0 chr17 61467286 61467354 -28037199 + MIR SINE MIR 14 89 -173 409 273 30 85 chr17 61467639 61467804 -28036749 - MIR3 SINE MIR -6 202 47 2041 120 16 3 chr17 61467861 61468169 -28036384 - AluSx SINE Alu 0 312 1 210 171 0 0 chr17 61468530 61468571 -28035982 + (TG)n Simple_repeat Simple_repeat 1 41 0 2010 120 0 0 chr17 61468571 61468855 -28035698 - AluSx SINE Alu -26 286 3 662 226 146 53 chr17 61469063 61469289 -28035264 - MIR SINE MIR 0 262 16 425 326 39 0 chr17 61469290 61469419 -28035134 + MIR SINE MIR 118 251 -11 904 133 0 0 chr17 61470019 61470154 -28034399 - AluSq SINE Alu -135 178 44 189 132 0 0 chr17 61470393 61470431 -28034122 + (TTTCG)n Simple_repeat Simple_repeat 3 40 0 1678 154 4 0 chr17 61470446 61470718 -28033835 - AluSx SINE Alu -39 273 1 289 284 144 51 chr17 61470718 61470954 -28033599 - MIR SINE MIR 0 262 5 209 268 0 110 chr17 61471047 61471129 -28033424 - MIR3 SINE MIR -21 187 115 275 303 66 0 chr17 61471168 61471244 -28033309 - MIR SINE MIR -83 125 45 243 315 76 99 chr17 61471512 61471934 -28032619 - L2 LINE L2 -458 2856 2445 339 325 43 37 chr17 61472019 61472182 -28032371 + MIR3 SINE MIR 22 185 -23 541 319 116 33 chr17 61472216 61472545 -28032008 - L2 LINE L2 0 3272 2917 252 214 272 39 chr17 61472894 61472997 -28031556 - MIR SINE MIR -116 146 20 368 282 56 28 chr17 61473474 61473616 -28030937 + MIR SINE MIR 22 167 -95 924 147 6 6 chr17 61473882 61474038 -28030515 + FRAM SINE Alu 1 156 -20 571 306 43 5 chr17 61474082 61474268 -28030285 - MIR SINE MIR -59 203 11 512 339 0 12 chr17 61474285 61474450 -28030103 + MIR SINE MIR 8 170 -92 2356 71 0 7 chr17 61474556 61474865 -28029688 - AluY SINE Alu -4 307 1 238 254 60 15 chr17 61474976 61475043 -28029510 - MIR SINE MIR -89 173 104 207 0 0 0 chr17 61475066 61475089 -28029464 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 216 338 76 64 chr17 61475817 61475974 -28028579 - L2 LINE L2 -75 3197 3039 187 236 36 154 chr17 61476121 61476152 -28028401 + MIR SINE MIR 80 113 -149 1949 134 7 0 chr17 61476152 61476450 -28028103 - AluSq SINE Alu -9 304 5 187 236 36 154 chr17 61476450 61476528 -28028025 + MIR SINE MIR 113 176 -86 883 167 30 99 chr17 61476784 61477017 -28027536 - MER20 DNA MER1_type 0 219 3 218 286 16 16 chr17 61477066 61477129 -28027424 - MIR SINE MIR -61 147 85 471 314 41 13 chr17 61478689 61478915 -28025638 - MIR SINE MIR -6 256 18 269 309 197 44 chr17 61479015 61479310 -28025243 - L2 LINE L2 -16 3256 2917 805 270 68 13 chr17 61479557 61479794 -28024759 + MIR SINE MIR 2 251 -11 267 79 0 0 chr17 61480494 61480532 -28024021 + (CA)n Simple_repeat Simple_repeat 1 38 0 375 251 131 28 chr17 61480728 61480930 -28023623 + MIR SINE MIR 34 259 -3 246 266 85 11 chr17 61481093 61481187 -28023366 - MIR SINE MIR -50 212 112 1522 228 58 4 chr17 61481287 61481680 -28022873 + MLT1F LTR MaLR 12 456 -111 2194 109 0 0 chr17 61481748 61482050 -28022503 - AluSx SINE Alu -10 302 1 640 309 145 37 chr17 61482279 61482888 -28021665 + L2 LINE L2 2561 3266 -6 1985 128 3 3 chr17 61483075 61483371 -28021182 - AluSx SINE Alu -16 296 1 333 68 0 0 chr17 61483594 61483638 -28020915 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 696 205 179 5 chr17 61483671 61483866 -28020687 + MIR SINE MIR 34 262 0 357 308 145 0 chr17 61483860 61483977 -28020576 - L2 LINE L2 -1 3271 3138 * 215 227 0 0 chr17 61484264 61484308 -28020245 - L2 LINE L2 -677 2637 2594 1142 196 33 5 chr17 61484360 61484574 -28019979 - MER58A DNA MER1_type -4 220 1 496 311 99 23 chr17 61485248 61485592 -28018961 + L1MC4a LINE L1 5524 5893 -1915 942 174 17 6 chr17 61485662 61485834 -28018719 - MER96 DNA MER1_type 0 175 2 311 220 55 55 chr17 61486151 61486260 -28018293 - MLT1J LTR MaLR -42 469 361 662 267 101 16 chr17 61486285 61486595 -28017958 - MLT1I LTR MaLR -22 387 77 493 234 72 32 chr17 61486882 61487047 -28017506 - MIR SINE MIR -62 146 16 2236 85 9 29 chr17 61487361 61487677 -28016876 + AluSx SINE Alu 1 310 -2 398 316 98 35 chr17 61487685 61487910 -28016643 + MIR SINE MIR 19 256 -6 207 0 0 0 chr17 61488102 61488125 -28016428 + (A)n Simple_repeat Simple_repeat 1 23 0 2099 114 0 0 chr17 61488502 61488792 -28015761 + AluSg SINE Alu 1 290 -20 399 21 0 0 chr17 61489644 61489692 -28014861 + (TG)n Simple_repeat Simple_repeat 2 49 0 454 370 88 18 chr17 61490931 61491158 -28013395 - MIR SINE MIR 0 262 20 2168 102 0 0 chr17 61491158 61491461 -28013092 + AluSq SINE Alu 1 303 -10 298 206 27 14 chr17 61491860 61491933 -28012620 + MIR SINE MIR 77 150 -112 2147 88 0 23 chr17 61491953 61492258 -28012295 - AluSx SINE Alu -14 298 1 354 209 8 93 chr17 61492732 61492861 -28011692 - MIR SINE MIR -65 197 80 1935 129 17 0 chr17 61492947 61493249 -28011304 + AluSx SINE Alu 1 307 -5 317 240 0 83 chr17 61493874 61493970 -28010583 - L1MC4 LINE L1 -1340 6702 6615 322 340 11 14 chr17 61494051 61494218 -28010335 + GA-rich Low_complexity Low_complexity 1 166 0 1349 203 6 11 chr17 61494667 61494987 -28009566 - MLT1A1 LTR MaLR 0 365 1 331 350 122 0 chr17 61495414 61495537 -28009016 + L2 LINE L2 3121 3258 -14 1059 156 78 99 chr17 61495542 61495658 -28008895 + AluJo SINE Alu 5 122 -190 264 91 0 0 chr17 61495658 61495702 -28008851 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1059 156 78 99 chr17 61495702 61495771 -28008782 + AluJo SINE Alu 122 191 -121 2208 98 3 16 chr17 61495771 61496088 -28008465 - AluSq SINE Alu 0 313 1 1059 156 78 99 chr17 61496088 61496184 -28008369 + AluJo SINE Alu 191 281 -31 599 48 12 0 chr17 61496185 61496268 -28008285 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 246 274 87 0 chr17 61496430 61496534 -28008019 + MIR SINE MIR 74 192 -64 298 273 148 74 chr17 61496795 61496971 -28007582 - MIR SINE MIR -54 208 20 2013 125 0 3 chr17 61498200 61498548 -28006005 - AluSx SINE Alu 0 347 1 633 295 27 6 chr17 61498861 61499044 -28005509 - MIR SINE MIR -74 188 2 184 258 97 0 chr17 61499682 61499744 -28004809 - MIR SINE MIR -92 170 103 246 300 294 6 chr17 61499752 61499922 -28004631 - MIR SINE MIR -13 249 31 610 214 149 0 chr17 61500267 61500421 -28004132 - MER45A DNA AcHobo 0 178 2 250 337 0 12 chr17 61501097 61501180 -28003373 + GA-rich Low_complexity Low_complexity 3 84 0 315 300 15 69 chr17 61501186 61501316 -28003237 + L2 LINE L2 3175 3297 -16 381 243 6 0 chr17 61501370 61501534 -28003019 + (TGGA)n Simple_repeat Simple_repeat 1 165 0 368 279 29 59 chr17 61501634 61501770 -28002783 - MIR SINE MIR -80 182 51 1396 229 175 48 chr17 61502397 61502917 -28001636 + MLT1E LTR MaLR 3 588 -5 587 215 35 28 chr17 61503121 61503265 -28001288 - MLT1H LTR MaLR -400 149 5 284 233 68 19 chr17 61503358 61503461 -28001092 + L1ME4a LINE L1 6013 6120 -1 199 331 72 50 chr17 61503772 61503836 -28000717 - MIR3 SINE MIR -7 201 140 445 145 13 13 chr17 61503836 61503912 -28000641 + MER116 DNA Mariner 5 80 0 199 331 72 50 chr17 61503912 61503986 -28000567 - MIR3 SINE MIR -68 140 60 237 65 0 0 chr17 61504717 61504748 -27999805 + (TC)n Simple_repeat Simple_repeat 2 32 0 264 100 0 0 chr17 61504749 61504789 -27999764 + (CA)n Simple_repeat Simple_repeat 2 41 0 212 303 76 0 chr17 61505670 61505736 -27998817 + L3b LINE CR1 1485 1555 -28 477 215 168 0 chr17 61505754 61505861 -27998692 - L2 LINE L2 -2 3270 3146 329 288 136 24 chr17 61505995 61506120 -27998433 + L2 LINE L2 3175 3313 0 219 154 26 0 chr17 61506120 61506159 -27998394 + (TGGA)n Simple_repeat Simple_repeat 2 41 0 228 229 101 92 chr17 61506365 61506474 -27998079 - MER117 DNA MER1_type -87 110 1 1858 113 39 0 chr17 61507028 61507312 -27997241 + AluSx SINE Alu 1 295 -17 336 48 0 0 chr17 61507872 61507914 -27996639 + (TATAA)n Simple_repeat Simple_repeat 4 45 0 272 27 27 0 chr17 61508729 61508766 -27995787 + (TC)n Simple_repeat Simple_repeat 1 38 0 2178 112 0 3 chr17 61509739 61510042 -27994511 - AluSx SINE Alu -10 302 1 278 267 67 149 chr17 61510468 61510496 -27994057 - MER91A DNA MER1_type 0 196 167 306 0 0 0 chr17 61510496 61510530 -27994023 + (TTA)n Simple_repeat Simple_repeat 3 36 0 4084 58 20 0 chr17 61510530 61511033 -27993520 - L1PA6 LINE L1 -18 6136 5624 278 267 67 149 chr17 61511033 61511198 -27993355 - MER91A DNA MER1_type -27 169 18 726 297 40 9 chr17 61511376 61511598 -27992955 - MIR SINE MIR -5 257 29 372 255 27 71 chr17 61511626 61511810 -27992743 + MER5B DNA MER1_type 1 176 -2 1856 143 4 0 chr17 61512066 61512391 -27992162 - AluSx SINE Alu 0 326 1 580 192 108 8 chr17 61512758 61512888 -27991665 - MIR SINE MIR -39 223 81 423 344 20 7 chr17 61513073 61513224 -27991329 + MIR3 SINE MIR 19 171 -37 742 236 90 55 chr17 61513290 61513600 -27990953 + MLT1H LTR MaLR 2 322 -227 270 155 69 139 chr17 61513573 61513712 -27990841 + MLT1H LTR MaLR 463 549 0 * 454 283 65 14 chr17 61513888 61514026 -27990527 + L2 LINE L2 3127 3271 -1 213 311 155 0 chr17 61514249 61514352 -27990201 - L2 LINE L2 0 3272 3154 1067 242 6 30 chr17 61514784 61515103 -27989450 + L1MA1 LINE L1 5556 5824 -297 457 331 55 17 chr17 61515123 61515304 -27989249 + MIR SINE MIR 75 262 0 922 234 108 69 chr17 61516470 61516877 -27987676 - MLT1G LTR MaLR 0 590 109 183 80 0 0 chr17 61517215 61517240 -27987313 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 417 296 49 7 chr17 61518724 61518866 -27985687 - L1M4 LINE L1 -2801 3345 3198 232 290 11 32 chr17 61518903 61518996 -27985557 - MARNA DNA Mariner -362 224 134 587 259 44 59 chr17 61519241 61519591 -27984962 + MLT1J2 LTR MaLR 67 402 -7 21 0 0 0 chr17 61520011 61520032 -27984521 + AT_rich Low_complexity Low_complexity 1 21 0 646 286 116 17 chr17 61520238 61520581 -27983972 - L1MB8 LINE L1 -282 5896 5514 714 199 114 25 chr17 61520908 61521109 -27983444 + MER96B DNA MER1_type? 9 227 -190 333 62 0 0 chr17 61521163 61521211 -27983342 + (CA)n Simple_repeat Simple_repeat 2 49 0 318 199 0 5 chr17 61521231 61521303 -27983250 + MIR SINE MIR 81 151 -57 499 283 147 11 chr17 61521473 61521657 -27982896 - MIR SINE MIR -6 256 48 291 104 0 0 chr17 61522676 61522724 -27981829 + (CA)n Simple_repeat Simple_repeat 2 49 0 1065 198 24 10 chr17 61523181 61523388 -27981165 - MER20 DNA MER1_type 0 219 10 297 175 18 18 chr17 61523835 61523892 -27980661 - MIR SINE MIR -62 146 90 226 154 58 0 chr17 61524377 61524429 -27980124 + MIR SINE MIR 70 124 -84 1735 179 26 63 chr17 61525040 61525419 -27979134 - MLT1A1 LTR MaLR 0 365 1 233 355 18 27 chr17 61525591 61525701 -27978852 + MIR3 SINE MIR 4 112 -96 247 121 35 0 chr17 61526252 61526310 -27978243 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 336 102 0 0 chr17 61526567 61526616 -27977937 + (CA)n Simple_repeat Simple_repeat 2 50 0 1579 177 44 7 chr17 61527928 61528222 -27976331 - AluSx SINE Alu -7 305 1 251 158 0 0 chr17 61528558 61528596 -27975957 - MLT1B LTR MaLR -18 372 335 3677 106 18 8 chr17 61528596 61529089 -27975464 + Charlie3 DNA MER1_type 1 498 -2212 3264 89 38 13 chr17 61529085 61529534 -27975019 + Charlie3 DNA MER1_type 2242 2701 -9 * 1784 137 52 37 chr17 61529537 61529703 -27974850 - MLT1B LTR MaLR -46 344 182 1812 123 0 4 chr17 61529703 61529971 -27974582 - AluSx SINE Alu -45 267 1 1784 137 52 37 chr17 61529971 61530132 -27974421 - MLT1B LTR MaLR -208 182 12 262 173 0 39 chr17 61530193 61530245 -27974308 + L2 LINE L2 3264 3313 0 278 323 31 8 chr17 61530405 61530532 -27974021 + MIR SINE MIR 47 176 -86 1425 254 138 13 chr17 61530633 61531160 -27973393 - MLT1G1 LTR MaLR -2 593 1 906 209 0 16 chr17 61531445 61531622 -27972931 + AluJo SINE Alu 1 176 -136 914 74 0 27 chr17 61531622 61531771 -27972782 + (GAAA)n Simple_repeat Simple_repeat 2 146 0 2723 3 0 28 chr17 61532279 61532599 -27971954 - AluYa5 SINE Alu 0 311 1 223 333 0 0 chr17 61532799 61532883 -27971670 + (CA)n Simple_repeat Simple_repeat 2 85 0 225 268 0 0 chr17 61532894 61533032 -27971521 + (CA)n Simple_repeat Simple_repeat 1 138 0 419 324 132 72 chr17 61533040 61533563 -27970990 + L2 LINE L2 2723 3271 -1 1206 178 93 130 chr17 61533602 61534032 -27970521 - MSTD LTR MaLR 0 428 13 28 48 0 0 chr17 61534335 61534377 -27970176 + AT_rich Low_complexity Low_complexity 1 42 0 358 261 92 15 chr17 61534552 61534682 -27969871 - MLT1F1 LTR MaLR -317 250 111 522 235 211 29 chr17 61534879 61535083 -27969470 - MIR SINE MIR -8 254 14 637 174 12 0 chr17 61535480 61535641 -27968912 + CT-rich Low_complexity Low_complexity 1 163 0 180 0 0 0 chr17 61535643 61535663 -27968890 + (TC)n Simple_repeat Simple_repeat 1 20 0 264 276 133 10 chr17 61535845 61535943 -27968610 - MIR SINE MIR -89 119 9 409 298 41 102 chr17 61536031 61536326 -27968227 + L2 LINE L2 2992 3268 -4 646 342 58 17 chr17 61536508 61536748 -27967805 - MIR SINE MIR 0 262 13 228 389 79 8 chr17 61536823 61536949 -27967604 + L2 LINE L2 3122 3256 -16 352 279 136 7 chr17 61537207 61537347 -27967206 - MIR3 SINE MIR -46 162 5 284 346 75 0 chr17 61537945 61538052 -27966501 + L2 LINE L2 3153 3267 -5 387 377 16 0 chr17 61538605 61538727 -27965826 + MER91A DNA MER1_type 20 143 -53 208 211 0 0 chr17 61539420 61539458 -27965095 + C-rich Low_complexity Low_complexity 1 38 0 206 248 139 58 chr17 61540657 61540794 -27963759 - L3 LINE CR1 -16 1561 1414 243 179 321 0 chr17 61540901 61540957 -27963596 - L2 LINE L2 -2 3311 3238 1998 306 40 16 chr17 61541083 61541837 -27962716 - L3 LINE CR1 -185 1392 572 1272 331 28 21 chr17 61542230 61542759 -27961794 - L3 LINE CR1 -996 581 49 890 312 71 21 chr17 61542829 61543265 -27961288 - MLT1L LTR MaLR 0 615 158 1168 144 0 0 chr17 61543328 61543502 -27961051 + AluSx SINE Alu 1 174 -138 1197 179 9 0 chr17 61543529 61543753 -27960800 - AluJo SINE Alu -3 309 84 1880 146 3 19 chr17 61545237 61545553 -27959000 + AluJo SINE Alu 1 311 -1 22 0 0 0 chr17 61546177 61546199 -27958354 + AT_rich Low_complexity Low_complexity 1 22 0 1880 220 98 34 chr17 61546332 61546831 -27957722 + MLT1F LTR MaLR 3 533 -9 852 291 70 18 chr17 61546833 61547289 -27957264 + MLT1F-int LTR MaLR 1 600 -771 2237 100 7 0 chr17 61547318 61547628 -27956925 + AluSq SINE Alu 1 312 -1 320 284 101 34 chr17 61547893 61548041 -27956512 + MLT1F-int LTR MaLR 692 849 -522 462 290 123 49 chr17 61548282 61548606 -27955947 + MLT1F-int LTR MaLR 1023 1370 -1 203 202 5 96 chr17 61548685 61548883 -27955670 + (TAG)n Simple_repeat Simple_repeat 1 180 0 801 240 40 68 chr17 61548947 61549153 -27955400 + MIR SINE MIR 7 206 -56 2176 111 0 10 chr17 61549153 61549460 -27955093 + AluSx SINE Alu 1 304 -8 801 240 40 68 chr17 61549460 61549503 -27955050 + MIR SINE MIR 206 249 -13 1944 118 0 17 chr17 61549848 61550292 -27954261 + AluSx SINE Alu 1 439 0 375 242 19 99 chr17 61550295 61550456 -27954097 - MIR3 SINE MIR -41 167 20 277 284 0 0 chr17 61550877 61550951 -27953602 + MIR SINE MIR 65 138 -70 183 162 0 0 chr17 61551676 61551713 -27952840 + (CA)n Simple_repeat Simple_repeat 1 37 0 536 305 68 32 chr17 61552028 61552277 -27952276 + MLT1L LTR MaLR 1 258 -357 353 299 56 37 chr17 61552281 61552495 -27952058 + MLT1J LTR MaLR 230 447 -64 204 154 46 15 chr17 61552495 61552560 -27951993 + (TA)n Simple_repeat Simple_repeat 2 68 0 462 120 0 0 chr17 61552649 61552724 -27951829 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 260 239 0 28 chr17 61552724 61552795 -27951758 + MLT1L LTR MaLR 539 607 -8 2463 53 3 0 chr17 61552916 61553218 -27951335 - AluSp SINE Alu -10 303 1 363 23 0 0 chr17 61553458 61553502 -27951051 + (TG)n Simple_repeat Simple_repeat 1 44 0 565 246 123 39 chr17 61553573 61553776 -27950777 + MIR SINE MIR 43 262 0 1561 172 0 37 chr17 61553816 61554138 -27950415 - AluJo SINE Alu 0 313 3 2991 135 9 0 chr17 61554411 61554864 -27949689 - L1PA15 LINE L1 0 6165 5709 7534 146 5 3 chr17 61555229 61556665 -27947888 - L1MC1 LINE L1 0 6333 4894 26 0 0 0 chr17 61557143 61557169 -27947384 + AT_rich Low_complexity Low_complexity 1 26 0 650 329 63 0 chr17 61557187 61557424 -27947129 - MIR SINE MIR 0 262 11 786 22 0 0 chr17 61557443 61557535 -27947018 + (TTC)n Simple_repeat Simple_repeat 2 93 0 1696 90 5 0 chr17 61557563 61557785 -27946768 - AluSp SINE Alu -90 223 1 1454 197 58 31 chr17 61557979 61558339 -27946214 - MLT1A2 LTR MaLR -4 370 1 1811 148 0 0 chr17 61558358 61558636 -27945917 - AluJb SINE Alu -1 311 34 536 270 24 0 chr17 61558636 61558762 -27945791 - AluSg/x SINE Alu -53 257 129 1153 179 19 0 chr17 61558766 61558973 -27945580 - AluJo SINE Alu -15 297 87 532 313 18 18 chr17 61559041 61559204 -27945349 - MIR3 SINE MIR -10 198 36 573 283 127 19 chr17 61559267 61559479 -27945074 - MIR SINE MIR -25 237 3 421 238 150 69 chr17 61560426 61560614 -27943939 + MIR SINE MIR 28 224 -38 1918 115 7 17 chr17 61560682 61560977 -27943576 + AluSx SINE Alu 1 292 -20 622 333 70 4 chr17 61560992 61561220 -27943333 - MIR SINE MIR 0 262 20 2965 29 0 6 chr17 61561224 61561572 -27942981 - L1PA4 LINE L1 0 6155 5810 255 222 32 0 chr17 61562345 61562408 -27942145 + GA-rich Low_complexity Low_complexity 2 66 0 385 237 222 17 chr17 61562812 61562943 -27941610 + MIR SINE MIR 50 223 -39 510 0 43 0 chr17 61562943 61563013 -27941540 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 385 237 222 17 chr17 61563013 61563054 -27941499 + MIR SINE MIR 223 254 -8 2526 81 0 0 chr17 61563105 61563413 -27941140 - AluY SINE Alu -3 308 1 505 309 109 5 chr17 61564375 61564585 -27939968 + MIR SINE MIR 31 262 0 244 333 116 0 chr17 61564648 61564777 -27939776 + MIR SINE MIR 109 252 -10 293 302 101 19 chr17 61564928 61565087 -27939466 - MIR3 SINE MIR -7 201 30 219 279 69 94 chr17 61566216 61566283 -27938270 + L2 LINE L2 2809 2876 -396 1987 136 0 19 chr17 61566283 61566591 -27937962 - AluSx SINE Alu 0 312 11 219 279 69 94 chr17 61566591 61566610 -27937943 + L2 LINE L2 2876 2894 -378 2088 136 7 3 chr17 61566610 61566920 -27937633 - AluSq SINE Alu 0 313 3 219 279 69 94 chr17 61566920 61567065 -27937488 + L2 LINE L2 2894 3035 -237 812 251 5 15 chr17 61567156 61567351 -27937202 - MIR SINE MIR -56 206 14 512 345 49 0 chr17 61567847 61568093 -27936460 - MIR SINE MIR -3 259 2 484 283 73 49 chr17 61569091 61569296 -27935257 - L3 LINE CR1 -106 1471 1262 1131 181 88 15 chr17 61569336 61569766 -27934787 + MLT1D LTR MaLR 1 403 -6 566 265 20 7 chr17 61569842 61569989 -27934564 + L2 LINE L2 2927 3075 -238 697 276 73 17 chr17 61570020 61570252 -27934301 - MER112 DNA MER1_type -6 254 10 594 260 49 20 chr17 61570261 61570465 -27934088 + L2 LINE L2 3104 3313 0 359 187 19 28 chr17 61570528 61570635 -27933918 - MER113 DNA MER1_type? -408 113 8 324 301 37 31 chr17 61570723 61570886 -27933667 - MIR3 SINE MIR -34 174 11 387 292 9 33 chr17 61571049 61571191 -27933362 + MIR SINE MIR 16 152 -62 2137 106 0 3 chr17 61571204 61571521 -27933032 + AluSc SINE Alu 1 316 0 863 174 67 45 chr17 61571929 61572153 -27932400 + ORSL DNA AcHobo 47 275 0 1560 192 39 0 chr17 61572236 61572522 -27932031 - AluJo SINE Alu -9 303 7 1143 227 89 51 chr17 61572642 61572945 -27931608 + MLT1C LTR MaLR 1 328 -139 1549 161 232 9 chr17 61572945 61573294 -27931259 + MSTA LTR MaLR 2 428 0 1143 227 89 51 chr17 61573294 61573440 -27931113 + MLT1C LTR MaLR 328 467 0 350 248 69 0 chr17 61573913 61574014 -27930539 + MIR SINE MIR 107 214 -48 1777 182 0 0 chr17 61574475 61574755 -27929798 - AluJo SINE Alu -32 280 1 200 361 28 0 chr17 61575134 61575206 -27929347 - MIR SINE MIR -181 81 8 278 203 68 0 chr17 61575216 61575275 -27929278 + MIR SINE MIR 126 188 -74 2023 159 70 25 chr17 61575373 61575775 -27928778 + MSTB LTR MaLR 1 420 -6 240 294 135 53 chr17 61576355 61576525 -27928028 + MIR SINE MIR 32 215 -47 303 278 188 15 chr17 61576866 61576999 -27927554 + MIR SINE MIR 88 243 -19 215 286 48 0 chr17 61577316 61577379 -27927174 - L2 LINE L2 -87 3226 3161 2450 93 3 3 chr17 61577389 61577702 -27926851 + AluSp SINE Alu 1 313 0 186 43 0 0 chr17 61577702 61577725 -27926828 + (GA)n Simple_repeat Simple_repeat 2 24 0 648 251 141 8 chr17 61578617 61578840 -27925713 + MIR SINE MIR 8 261 -1 568 297 273 31 chr17 61579045 61579938 -27924615 - L2 LINE L2 -231 3041 1919 529 145 145 43 chr17 61579938 61580055 -27924498 + FLAM_C SINE Alu 5 133 -10 538 316 76 24 chr17 61580055 61580435 -27924118 - L2 LINE L2 -1378 1936 1537 366 336 36 27 chr17 61580507 61580534 -27924019 - MIR SINE MIR -36 226 201 2261 79 14 3 chr17 61580534 61580826 -27923727 - AluY SINE Alu -16 295 1 366 336 36 27 chr17 61580826 61581021 -27923532 - MIR SINE MIR -61 201 2 217 299 11 46 chr17 61581021 61581082 -27923471 + L2 LINE L2 3210 3267 -5 386 253 0 0 chr17 61581361 61581448 -27923105 + MLT1J1 LTR MaLR 1 87 -359 200 293 0 80 chr17 61581563 61581638 -27922915 + MIR SINE MIR 45 113 -95 1288 191 46 53 chr17 61581898 61582180 -27922373 + AluJo SINE Alu 1 280 -32 225 0 0 0 chr17 61582180 61582205 -27922348 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 762 290 33 22 chr17 61582209 61582481 -27922072 + MLT1J1 LTR MaLR 4 278 -168 652 291 39 35 chr17 61583464 61583560 -27920993 - MIR SINE MIR -3 259 165 2267 98 7 3 chr17 61583560 61583856 -27920697 - AluSx SINE Alu -9 303 7 652 291 39 35 chr17 61583856 61584013 -27920540 - MIR SINE MIR -97 165 5 316 259 35 43 chr17 61584557 61584673 -27919880 - MLT1H LTR MaLR -388 161 47 250 292 43 92 chr17 61585043 61585228 -27919325 - MIR SINE MIR -54 208 33 192 321 69 23 chr17 61586263 61586394 -27918159 - L2 LINE L2 -13 3300 3164 530 238 19 0 chr17 61587093 61587198 -27917355 - MIR SINE MIR -2 260 154 2121 165 43 86 chr17 61587205 61587764 -27916789 - MER44D DNA MER2_type -15 590 1 250 281 83 31 chr17 61588108 61588204 -27916349 + MIR SINE MIR 162 262 0 181 244 222 33 chr17 61588309 61588399 -27916154 + L2 LINE L2 3164 3270 -2 627 108 0 0 chr17 61588425 61588518 -27916035 + (TGGA)n Simple_repeat Simple_repeat 3 95 0 538 233 45 0 chr17 61590809 61590942 -27913611 + L1ME3A LINE L1 6027 6165 -5 875 154 88 0 chr17 61591106 61591242 -27913311 - FRAM SINE Alu -30 146 1 2871 90 0 3 chr17 61591706 61592071 -27912482 + THE1B LTR MaLR 1 364 0 185 332 58 46 chr17 61592196 61592437 -27912116 + L2 LINE L2 2839 3082 -190 568 273 133 40 chr17 61592507 61592785 -27911768 + L2 LINE L2 2502 2805 -509 701 295 135 22 chr17 61594451 61594895 -27909658 + L2 LINE L2 2820 3313 0 286 244 12 12 chr17 61594931 61595013 -27909540 - MLT1K LTR MaLR -2 586 505 189 272 0 74 chr17 61595329 61595410 -27909143 + L2 LINE L2 3187 3261 -11 197 314 71 0 chr17 61595751 61595821 -27908732 + L2 LINE L2 3152 3226 -46 233 363 47 12 chr17 61595970 61596141 -27908412 - L2 LINE L2 -184 3088 2912 382 348 80 28 chr17 61596432 61596682 -27907871 - L2 LINE L2 -1 3271 3009 1350 192 0 94 chr17 61596686 61597046 -27907507 - MER58B DNA MER1_type -15 326 1 1539 190 28 28 chr17 61597247 61597335 -27907218 - MER63B DNA MER1_type -688 374 287 1690 174 40 0 chr17 61597335 61597634 -27906919 + AluJo SINE Alu 1 311 -1 1539 190 28 28 chr17 61597634 61597908 -27906645 - MER63B DNA MER1_type -774 288 12 232 255 0 0 chr17 61599738 61599785 -27904768 + polypyrimidine Low_complexity Low_complexity 4 50 0 209 259 93 56 chr17 61599785 61599893 -27904660 - L3 LINE CR1 -162 1415 1304 761 281 0 0 chr17 61599899 61600070 -27904483 - MIR SINE MIR -90 172 2 209 289 222 33 chr17 61600110 61600200 -27904353 - L3b LINE CR1 -34 1549 1443 191 36 36 0 chr17 61601069 61601097 -27903456 + (TTG)n Simple_repeat Simple_repeat 2 30 0 347 282 41 87 chr17 61601635 61601830 -27902723 - MIR SINE MIR -14 248 63 983 209 71 4 chr17 61601869 61602122 -27902431 - MER33 DNA MER1_type 0 324 55 227 224 0 0 chr17 61602113 61602162 -27902391 - MER3 DNA MER1_type -121 88 40 * 284 100 0 20 chr17 61602585 61602635 -27901918 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 1583 193 98 28 chr17 61602650 61602840 -27901713 + MLT1C LTR MaLR 8 183 -284 2438 118 25 6 chr17 61602840 61603196 -27901357 - THE1B LTR MaLR -1 363 1 1583 193 98 28 chr17 61603196 61603435 -27901118 + MLT1C LTR MaLR 183 467 0 409 303 88 66 chr17 61603664 61603981 -27900572 + L3 LINE CR1 1251 1574 -3 2427 234 18 23 chr17 61605037 61605107 -27899446 - MLT1H1 LTR MaLR 0 555 486 2078 103 10 14 chr17 61605107 61605398 -27899155 + AluSx SINE Alu 2 291 -21 2427 234 18 23 chr17 61605398 61605883 -27898670 - MLT1H1 LTR MaLR -69 486 3 2401 88 3 0 chr17 61605973 61606280 -27898273 + AluSp SINE Alu 1 308 -5 2049 158 34 11 chr17 61606337 61606517 -27898036 + MLT1B LTR MaLR 1 175 -215 1065 194 88 57 chr17 61606517 61606800 -27897753 + AluJb SINE Alu 5 296 -6 2049 158 34 11 chr17 61606800 61606815 -27897738 + MLT1B LTR MaLR 175 188 -202 2189 49 0 0 chr17 61606815 61607082 -27897471 + L1PA4 LINE L1 5889 6155 0 2049 158 34 11 chr17 61607082 61607266 -27897287 + MLT1B LTR MaLR 188 390 0 288 77 0 0 chr17 61607628 61607667 -27896886 + (CA)n Simple_repeat Simple_repeat 1 39 0 326 301 163 20 chr17 61607734 61607887 -27896666 + MIR3 SINE MIR 32 206 -2 270 254 113 0 chr17 61607950 61608021 -27896532 + MIR SINE MIR 65 143 -65 373 354 76 39 chr17 61608288 61609265 -27895288 + L2 LINE L2 752 1764 -1550 315 329 46 13 chr17 61609573 61609725 -27894828 - L1ME4a LINE L1 -227 5894 5738 324 305 35 58 chr17 61610258 61610432 -27894121 + MIR3 SINE MIR 30 199 -9 972 275 122 10 chr17 61610671 61611091 -27893462 - LTR33A LTR ERVL -15 508 70 414 237 174 10 chr17 61611131 61611303 -27893250 - MIR SINE MIR -4 204 5 381 93 0 0 chr17 61611363 61611417 -27893136 + (TTTC)n Simple_repeat Simple_repeat 4 57 0 205 281 112 45 chr17 61611418 61611507 -27893046 + MIR SINE MIR 17 111 -97 195 156 0 0 chr17 61611513 61611545 -27893008 - L2 LINE L2 -10 3303 3272 204 239 0 0 chr17 61611552 61611598 -27892955 + MIR SINE MIR 109 154 -108 281 198 0 37 chr17 61611936 61612017 -27892536 + GA-rich Low_complexity Low_complexity 3 80 0 192 308 50 2 chr17 61612478 61612571 -27891982 + MIR SINE MIR 65 161 -47 780 266 180 12 chr17 61612575 61612992 -27891561 - LTR33 LTR ERVL -19 502 16 266 250 17 0 chr17 61613023 61613083 -27891470 + MIR SINE MIR 202 262 0 263 83 0 0 chr17 61613191 61613227 -27891326 + MER51A LTR ERV1 1 36 -598 * 1308 140 29 134 chr17 61613225 61613568 -27890985 + MER51A LTR ERV1 328 634 0 198 248 80 11 chr17 61613851 61613978 -27890575 + MIR SINE MIR 8 184 -78 2274 87 0 13 chr17 61614468 61614780 -27889773 - AluSx SINE Alu -4 308 1 459 304 43 12 chr17 61615005 61615166 -27889387 + MIR SINE MIR 26 191 -71 421 243 59 59 chr17 61616026 61616178 -27888375 - MIR SINE MIR -54 208 57 287 264 118 9 chr17 61616506 61616616 -27887937 + L2 LINE L2 2790 2911 -403 327 204 310 18 chr17 61616625 61616738 -27887815 + MER5A DNA MER1_type 41 186 -3 438 333 81 40 chr17 61616756 61616809 -27887744 + L2 LINE L2 2917 2966 -306 2414 68 0 10 chr17 61616809 61617119 -27887434 - AluSc SINE Alu -2 307 1 438 333 81 40 chr17 61617119 61617338 -27887215 + L2 LINE L2 2966 3200 -72 181 213 21 43 chr17 61617488 61617535 -27887018 - L2 LINE L2 -1 3312 3267 290 269 145 21 chr17 61617830 61618023 -27886530 - HAL1 LINE L1 0 2507 2291 2841 64 3 17 chr17 61618143 61618503 -27886050 + THE1A LTR MaLR 1 355 0 12075 87 2 11 chr17 61618503 61620059 -27884494 + THE1A-int LTR MaLR 1 1545 -35 2391 74 0 0 chr17 61620059 61620358 -27884195 + AluY SINE Alu 1 299 -12 12075 87 2 11 chr17 61620358 61620394 -27884159 + THE1A-int LTR MaLR 1545 1580 0 513 65 0 0 chr17 61620394 61620456 -27884097 + THE1A LTR MaLR 1 62 -293 361 218 115 0 chr17 61620456 61620543 -27884010 + MIR SINE MIR 114 210 -52 310 286 33 108 chr17 61620871 61621096 -27883457 - MIR SINE MIR -23 239 40 1529 186 7 4 chr17 61621149 61621428 -27883125 + AluJb SINE Alu 1 280 -32 733 130 26 13 chr17 61621452 61621606 -27882947 + GA-rich Low_complexity Low_complexity 4 159 0 277 337 56 11 chr17 61622064 61622153 -27882400 + MER91A DNA MER1_type 32 124 -72 * 499 331 0 0 chr17 61622129 61622253 -27882300 - MER91A DNA MER1_type -72 124 1 722 256 17 0 chr17 61622258 61622434 -27882119 + MER102a DNA MER1_type 148 326 -4 246 225 86 86 chr17 61623458 61623645 -27880908 - MST-int LTR MaLR -1 1650 1464 2051 105 3 13 chr17 61624519 61624832 -27879721 + AluY SINE Alu 2 311 0 1794 142 30 0 chr17 61625356 61625658 -27878895 + AluJo SINE Alu 1 311 -1 406 286 40 16 chr17 61626947 61627073 -27877480 + L3b LINE CR1 1333 1461 -122 216 0 0 0 chr17 61627073 61627097 -27877456 + (T)n Simple_repeat Simple_repeat 1 24 0 207 69 0 0 chr17 61628137 61628166 -27876387 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 277 259 14 86 chr17 61628188 61628327 -27876226 - L2 LINE L2 -46 3267 3139 674 301 70 23 chr17 61628333 61628678 -27875875 - L2 LINE L2 -110 3203 2843 310 353 50 0 chr17 61628719 61628838 -27875715 - MIR3 SINE MIR -25 183 59 489 324 53 24 chr17 61629045 61629252 -27875301 + MIR SINE MIR 20 232 -30 382 325 32 87 chr17 61629374 61629874 -27874679 - L2 LINE L2 -1 3271 2730 321 243 0 14 chr17 61629911 61629985 -27874568 - L2 LINE L2 0 3272 3200 187 259 19 37 chr17 61630059 61630113 -27874440 + MIR SINE MIR 20 72 -136 848 236 23 0 chr17 61630362 61630536 -27874017 - MER45A DNA AcHobo 0 178 1 346 271 49 49 chr17 61630540 61630662 -27873891 - MIR3 SINE MIR -52 156 35 235 391 26 26 chr17 61630792 61631025 -27873528 + L2 LINE L2 2737 2969 -345 195 162 0 0 chr17 61631147 61631184 -27873369 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 840 178 10 0 chr17 61631244 61631559 -27872994 + (TCCA)n Simple_repeat Simple_repeat 1 318 0 456 239 34 34 chr17 61631561 61631678 -27872875 - L2 LINE L2 -1 3271 3155 21 43 0 0 chr17 61633581 61633604 -27870949 + AT_rich Low_complexity Low_complexity 1 23 0 311 231 82 106 chr17 61634376 61634584 -27869969 - MIR SINE MIR -1 261 59 269 226 9 104 chr17 61634590 61634696 -27869857 + MIR SINE MIR 83 178 -84 22 56 0 0 chr17 61635031 61635067 -27869486 + AT_rich Low_complexity Low_complexity 1 36 0 1004 241 9 5 chr17 61635261 61635477 -27869076 + MIR SINE MIR 8 224 -38 413 339 16 0 chr17 61635617 61635744 -27868809 + MIR3 SINE MIR 32 160 -48 518 241 46 0 chr17 61635874 61635982 -27868571 - MER81 DNA DNA -1 113 1 352 190 109 75 chr17 61636213 61636387 -27868166 + MER113 DNA MER1_type? 152 331 -190 460 261 8 8 chr17 61636414 61636533 -27868020 + MER113 DNA MER1_type? 397 515 -6 1624 160 0 11 chr17 61636650 61636931 -27867622 + AluJo SINE Alu 5 282 -30 232 136 77 13 chr17 61636937 61637092 -27867461 + (TA)n Simple_repeat Simple_repeat 1 165 0 324 0 0 0 chr17 61637092 61637128 -27867425 + (CA)n Simple_repeat Simple_repeat 2 37 0 940 292 138 52 chr17 61637597 61638615 -27865938 + L2 LINE L2 2170 3269 -3 766 242 96 23 chr17 61639279 61639498 -27865055 - MIR SINE MIR 0 262 28 508 299 25 44 chr17 61639743 61639878 -27864675 + MIR SINE MIR 12 142 -120 267 31 0 0 chr17 61639878 61639910 -27864643 + (ATG)n Simple_repeat Simple_repeat 3 34 0 508 299 25 44 chr17 61639910 61639987 -27864566 + MIR SINE MIR 142 219 -43 405 274 42 108 chr17 61640046 61640258 -27864295 - L2 LINE L2 0 3272 3075 23 0 0 0 chr17 61641083 61641106 -27863447 + AT_rich Low_complexity Low_complexity 1 23 0 212 204 37 0 chr17 61641648 61641702 -27862851 - MIR SINE MIR -72 136 81 727 212 143 48 chr17 61641731 61641962 -27862591 - MIR SINE MIR -2 260 8 186 43 0 0 chr17 61641966 61641989 -27862564 + (TG)n Simple_repeat Simple_repeat 2 24 0 227 291 203 0 chr17 61642173 61642252 -27862301 + L2 LINE L2 3158 3252 -20 307 307 109 66 chr17 61642519 61642702 -27861851 - MIR SINE MIR -53 155 1 650 276 26 35 chr17 61642725 61642953 -27861600 + L2 LINE L2 2848 3073 -240 545 263 19 25 chr17 61643091 61643251 -27861302 - MIR SINE MIR -31 231 73 4676 150 14 49 chr17 61643268 61644050 -27860503 + L1MB5 LINE L1 5294 6043 -131 1984 120 6 19 chr17 61644050 61644366 -27860187 + AluSx SINE Alu 1 312 0 4676 150 14 49 chr17 61644366 61644481 -27860072 + L1MB5 LINE L1 6043 6160 -14 343 256 13 0 chr17 61644504 61644582 -27859971 + L2 LINE L2 3182 3260 -12 5243 68 3 7 chr17 61644649 61645338 -27859215 - L1PA10 LINE L1 0 6168 5483 786 146 146 37 chr17 61645388 61645484 -27859069 - MER5A DNA MER1_type -2 187 103 1586 214 59 94 chr17 61645484 61646058 -27858495 + MER41C LTR ERV1 1 554 0 786 146 146 37 chr17 61646058 61646125 -27858428 - MER5A DNA MER1_type -86 103 6 439 327 30 28 chr17 61646410 61646707 -27857846 + L2 LINE L2 2709 3006 -307 216 163 163 0 chr17 61646935 61646978 -27857575 + L2 LINE L2 3246 3295 -18 225 216 14 68 chr17 61647351 61647425 -27857128 - L2 LINE L2 -10 3303 3234 4147 147 55 11 chr17 61647468 61648164 -27856389 - MER44D DNA MER2_type -7 598 1 600 184 40 16 chr17 61648328 61648453 -27856100 + MIR SINE MIR 127 254 -8 230 342 101 20 chr17 61648460 61648609 -27855944 - MIR SINE MIR -70 192 32 689 231 21 0 chr17 61648673 61648816 -27855737 + MER58B DNA MER1_type 196 341 0 187 261 15 31 chr17 61648834 61648899 -27855654 + L2 LINE L2 3169 3232 -81 548 261 34 30 chr17 61649181 61649449 -27855104 + L1M4 LINE L1 4290 4558 -1588 713 246 29 12 chr17 61649639 61649810 -27854743 - MIR SINE MIR -76 186 13 393 271 0 86 chr17 61650507 61650618 -27853935 + MIR SINE MIR 4 96 -117 1776 170 93 54 chr17 61650618 61651101 -27853452 + MLT1D LTR MaLR 4 505 0 393 271 0 86 chr17 61651101 61651153 -27853400 + MIR SINE MIR 96 151 -62 1816 132 87 0 chr17 61651153 61651442 -27853111 - MER47A DNA MER2_type 0 366 53 2894 123 19 2 chr17 61651536 61651957 -27852596 + MSTA LTR MaLR 1 428 0 210 171 0 0 chr17 61652278 61652313 -27852240 + (TA)n Simple_repeat Simple_repeat 1 35 0 225 196 0 22 chr17 61652430 61652443 -27852110 + GA-rich Low_complexity Low_complexity 2 14 -32 2120 112 0 3 chr17 61652443 61652738 -27851815 + AluSx SINE Alu 1 294 -18 225 196 0 22 chr17 61652738 61652770 -27851783 + GA-rich Low_complexity Low_complexity 14 46 0 850 200 3 5 chr17 61653268 61653668 -27850885 + (TGG)n Simple_repeat Simple_repeat 1 399 0 250 268 0 14 chr17 61653669 61653740 -27850813 + GA-rich Low_complexity Low_complexity 3 72 0 522 291 94 19 chr17 61653753 61653966 -27850587 - MIR SINE MIR -6 256 28 427 288 101 25 chr17 61654188 61654386 -27850167 - MIR SINE MIR -49 213 1 190 303 110 55 chr17 61654697 61654842 -27849711 + MIR SINE MIR 51 203 -59 741 230 19 12 chr17 61656140 61656301 -27848252 - MER5A DNA MER1_type 0 189 28 716 272 35 20 chr17 61656334 61656588 -27847965 + L1ME3A LINE L1 5679 5936 -234 371 204 31 10 chr17 61656669 61656767 -27847786 + L1MB8 LINE L1 2310 2409 -3737 * 1879 179 2 59 chr17 61656741 61657150 -27847403 + L1MB8 LINE L1 5552 5937 -241 557 290 7 0 chr17 61657806 61657961 -27846592 - LTR33 LTR ERVL -53 468 313 523 259 113 16 chr17 61658026 61658211 -27846342 - LTR33 LTR ERVL -305 216 14 1302 157 27 0 chr17 61658958 61659181 -27845372 - L1MC1 LINE L1 0 6333 6105 1668 177 0 19 chr17 61659191 61659507 -27845046 + AluJb SINE Alu 1 310 -2 1723 145 179 0 chr17 61659508 61659820 -27844733 - MSTB1 LTR MaLR -99 333 1 4591 127 43 6 chr17 61659820 61660537 -27844016 - L1MC1 LINE L1 -265 6068 5325 2558 46 0 0 chr17 61660704 61661009 -27843544 - AluY SINE Alu -5 306 2 407 325 95 39 chr17 61661038 61661390 -27843163 + L2 LINE L2 2718 3091 -181 845 178 37 18 chr17 61661547 61661710 -27842843 + FRAM SINE Alu 1 165 -11 284 274 14 0 chr17 61662623 61662696 -27841857 + MIR SINE MIR 100 173 -89 600 231 119 123 chr17 61662772 61663266 -27841287 + LTR33 LTR ERVL 19 510 -11 204 273 30 30 chr17 61663267 61663333 -27841220 + MIR SINE MIR 195 260 -2 183 344 0 0 chr17 61663389 61663450 -27841103 + L2 LINE L2 3210 3270 -2 1062 195 144 41 chr17 61663484 61664063 -27840490 + Charlie1a DNA MER1_type 49 741 -714 237 340 126 44 chr17 61665653 61665924 -27838629 - L2 LINE L2 -12 3260 2968 616 288 12 33 chr17 61666224 61666467 -27838086 + L1ME LINE L1 5546 5783 -338 2601 71 0 0 chr17 61666611 61666919 -27837634 - AluY SINE Alu -3 308 1 749 135 48 16 chr17 61667209 61667335 -27837218 - FRAM SINE Alu -46 130 1 728 224 149 0 chr17 61667336 61667564 -27836989 - L2 LINE L2 -529 2785 2524 311 304 186 42 chr17 61667579 61667961 -27836592 - L2 LINE L2 -910 2404 1968 239 326 22 0 chr17 61668100 61668189 -27836364 - MER5A DNA MER1_type -89 100 10 685 120 0 0 chr17 61668437 61668589 -27835964 + AluJb SINE Alu 185 336 0 370 183 30 0 chr17 61670129 61670293 -27834260 + (CA)n Simple_repeat Simple_repeat 2 170 0 347 229 33 6 chr17 61670311 61670648 -27833905 + (CA)n Simple_repeat Simple_repeat 1 346 0 299 251 35 12 chr17 61670785 61670956 -27833597 + (CA)n Simple_repeat Simple_repeat 1 175 0 303 185 32 6 chr17 61670982 61671139 -27833414 + (CA)n Simple_repeat Simple_repeat 2 162 0 419 259 37 0 chr17 61671869 61671977 -27832576 - MIR3 SINE MIR -43 165 54 213 259 65 9 chr17 61671992 61672100 -27832453 + L2 LINE L2 2946 3059 -213 629 214 107 0 chr17 61672566 61672725 -27831828 + MER5B DNA MER1_type 1 176 -2 910 182 47 37 chr17 61672880 61673094 -27831459 - MER20 DNA MER1_type -3 216 1 260 227 84 0 chr17 61673980 61674099 -27830454 + L2 LINE L2 2029 2157 -1157 182 211 26 0 chr17 61674374 61674412 -27830141 - MIR SINE MIR -20 242 204 38 22 0 0 chr17 61674438 61674483 -27830070 + AT_rich Low_complexity Low_complexity 1 45 0 555 239 70 0 chr17 61674502 61674644 -27829909 - MIR SINE MIR -110 152 1 32 0 0 0 chr17 61676304 61676336 -27828217 + AT_rich Low_complexity Low_complexity 1 32 0 503 298 21 0 chr17 61676957 61677098 -27827455 + MIR SINE MIR 29 172 -90 245 261 120 49 chr17 61677148 61677290 -27827263 - MIR3 SINE MIR -46 162 11 336 64 0 0 chr17 61677467 61677514 -27827039 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 1635 138 40 40 chr17 61677522 61677798 -27826755 - AluJo SINE Alu -36 276 1 1624 191 10 17 chr17 61678107 61678401 -27826152 - AluJb SINE Alu -20 292 1 1731 171 24 3 chr17 61678499 61678786 -27825767 - AluJb SINE Alu -19 293 1 201 74 0 0 chr17 61678799 61678826 -27825727 + (A)n Simple_repeat Simple_repeat 1 27 0 781 258 0 0 chr17 61679018 61679177 -27825376 + FRAM SINE Alu 1 156 -20 1082 133 153 65 chr17 61679210 61679504 -27825049 - MER33 DNA MER1_type 0 324 5 689 300 125 11 chr17 61679520 61680106 -27824447 + L2 LINE L2 2560 3207 -106 23 0 0 0 chr17 61680116 61680139 -27824414 + AT_rich Low_complexity Low_complexity 1 23 0 3699 131 23 20 chr17 61680708 61681311 -27823242 - MER6A DNA MER2_type 0 605 1 198 0 0 0 chr17 61681410 61681432 -27823121 + (T)n Simple_repeat Simple_repeat 1 22 0 1624 153 35 0 chr17 61681553 61681724 -27822829 - AluJo SINE Alu -13 299 115 207 0 0 0 chr17 61681724 61681747 -27822806 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1624 153 35 0 chr17 61681747 61681829 -27822724 - AluJo SINE Alu -197 115 37 400 302 65 0 chr17 61682136 61682275 -27822278 + L2 LINE L2 2560 2707 -607 310 243 236 28 chr17 61682368 61682512 -27822041 + MLT1H LTR MaLR 1 174 -375 372 169 88 89 chr17 61682737 61682860 -27821693 + MLT1H LTR MaLR 308 549 0 333 289 41 96 chr17 61682975 61683193 -27821360 + MIR SINE MIR 2 207 -55 786 216 55 55 chr17 61683983 61684330 -27820223 + HAL1 LINE L1 839 1185 -1322 1921 101 0 8 chr17 61684352 61684620 -27819933 + L1MC1 LINE L1 5644 5909 -424 1694 233 47 16 chr17 61684663 61685093 -27819460 + MSTB2 LTR MaLR 15 457 0 324 265 125 15 chr17 61685715 61685851 -27818702 - MER5A DNA MER1_type -28 161 11 258 285 187 49 chr17 61685861 61685984 -27818569 + MIR SINE MIR 13 152 -110 380 253 168 23 chr17 61686244 61686548 -27818005 + L1ME4a LINE L1 5709 6056 -65 198 143 0 0 chr17 61686582 61686617 -27817936 + (TG)n Simple_repeat Simple_repeat 2 36 0 2115 115 4 0 chr17 61686617 61686896 -27817657 - AluSx SINE Alu -32 280 1 337 219 254 0 chr17 61687214 61687328 -27817225 + MER5A DNA MER1_type 12 154 -35 428 206 82 0 chr17 61687424 61687521 -27817032 + MIR SINE MIR 58 162 -100 264 220 253 0 chr17 61688054 61688145 -27816408 + MER5A DNA MER1_type 41 154 -35 1093 96 0 0 chr17 61688568 61688704 -27815849 + AluSg SINE Alu 1 136 -174 369 74 0 0 chr17 61688713 61688767 -27815786 + AluSc SINE Alu 242 295 -4 2288 95 3 3 chr17 61688767 61689061 -27815492 + AluSp SINE Alu 1 294 -19 191 326 54 11 chr17 61689061 61689153 -27815400 + MER5A DNA MER1_type 66 161 -28 259 253 126 71 chr17 61689185 61689367 -27815186 - L1ME3A LINE L1 -14 6156 5965 2094 126 13 0 chr17 61689641 61689943 -27814610 + AluSq SINE Alu 1 306 -7 2552 68 0 7 chr17 61690705 61691014 -27813539 + AluY SINE Alu 1 307 -4 291 271 176 10 chr17 61691473 61691726 -27812827 - L2 LINE L2 -240 3073 2779 233 302 54 35 chr17 61691771 61692029 -27812524 - L2 LINE L2 -668 2646 2384 558 136 0 68 chr17 61692434 61692514 -27812039 + MER67A LTR ERV1 1 73 -470 2072 242 40 37 chr17 61692514 61692586 -27811967 + MER67B LTR ERV1 1 71 -590 2216 102 3 7 chr17 61692586 61692889 -27811664 - AluSg1 SINE Alu -7 302 1 2072 242 40 37 chr17 61692889 61693465 -27811088 + MER67B LTR ERV1 71 651 -10 253 208 28 0 chr17 61693483 61693555 -27810998 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 305 320 28 40 chr17 61693569 61693816 -27810737 - HAL1 LINE L1 -1494 1013 770 22 0 0 0 chr17 61694337 61694359 -27810194 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr17 61694420 61694449 -27810104 + GC_rich Low_complexity Low_complexity 1 29 0 254 257 0 79 chr17 61694561 61694713 -27809840 + C-rich Low_complexity Low_complexity 4 143 0 24 0 0 0 chr17 61696842 61696866 -27807687 + AT_rich Low_complexity Low_complexity 1 24 0 334 287 62 74 chr17 61697250 61697629 -27806924 + L2 LINE L2 2683 3061 -211 480 165 0 0 chr17 61697683 61697762 -27806791 + MER5A DNA MER1_type 1 79 -110 276 174 221 12 chr17 61697793 61697879 -27806674 - MER53 DNA DNA -85 104 1 404 182 121 0 chr17 61697881 61697980 -27806573 + MER5A DNA MER1_type 79 189 0 808 205 107 15 chr17 61698995 61699200 -27805353 - MER58A DNA MER1_type 0 224 1 263 227 0 0 chr17 61699347 61699391 -27805162 + U6 snRNA snRNA 63 106 -1 476 172 172 0 chr17 61699394 61699523 -27805030 + L1ME2 LINE L1 6015 6166 0 26 30 0 0 chr17 61699697 61699730 -27804823 + AT_rich Low_complexity Low_complexity 1 33 0 560 201 114 55 chr17 61699740 61699959 -27804594 + L1MC4 LINE L1 7811 8042 0 1798 182 0 13 chr17 61700158 61700465 -27804088 - AluJb SINE Alu -9 303 1 2212 66 62 0 chr17 61700543 61700815 -27803738 + AluSp SINE Alu 1 289 -24 1823 136 14 14 chr17 61701005 61701322 -27803231 - AluSx SINE Alu 0 317 1 648 125 48 0 chr17 61701507 61701611 -27802942 + FLAM_A SINE Alu 18 126 -16 2173 105 10 10 chr17 61701616 61701911 -27802642 + AluSg SINE Alu 1 295 -15 707 161 161 14 chr17 61702449 61702621 -27801932 - AluSg/x SINE Alu 0 311 119 30 59 0 0 chr17 61702875 61702926 -27801627 + AT_rich Low_complexity Low_complexity 1 51 0 899 161 274 0 chr17 61703811 61704138 -27800415 - Charlie1b DNA MER1_type -68 455 37 1960 147 3 7 chr17 61704159 61704459 -27800094 + AluSx SINE Alu 1 299 -13 354 274 23 51 chr17 61705078 61705253 -27799300 - MER5B DNA MER1_type -1 177 8 668 279 64 9 chr17 61705971 61706204 -27798349 + L3 LINE CR1 1329 1574 -3 2732 221 52 8 chr17 61706587 61707217 -27797336 + L1MB7 LINE L1 5508 6165 -19 337 273 87 41 chr17 61707625 61707867 -27796686 - L1ME LINE L1 -326 5795 5543 2195 132 3 0 chr17 61707983 61708278 -27796275 - AluSx SINE Alu -16 296 1 348 320 70 19 chr17 61708289 61708445 -27796108 + MIR SINE MIR 71 234 -28 1864 170 0 0 chr17 61708785 61709102 -27795451 - AluJb SINE Alu 0 317 1 1882 164 3 25 chr17 61710759 61711077 -27793476 - AluJo SINE Alu -1 311 1 236 248 48 67 chr17 61711871 61711976 -27792577 + HAL1 LINE L1 362 464 -2043 718 256 139 74 chr17 61712029 61712532 -27792021 + HAL1 LINE L1 574 1109 -1398 1038 147 0 71 chr17 61712540 61712737 -27791816 + AluJo SINE Alu 119 301 -11 453 230 113 75 chr17 61712739 61712775 -27791778 + HAL1 LINE L1 2277 2310 -197 2374 88 0 0 chr17 61712775 61713070 -27791483 + AluSx SINE Alu 1 295 -17 453 230 113 75 chr17 61713070 61713246 -27791307 + HAL1 LINE L1 2310 2497 -10 3142 141 27 24 chr17 61713373 61713482 -27791071 - L1M2 LINE L1 -745 5401 5294 1414 166 4 0 chr17 61713482 61713717 -27790836 - MER46A DNA MER2_type 0 236 1 3142 141 27 24 chr17 61713717 61714299 -27790254 - L1M2 LINE L1 -852 5294 4799 3559 147 36 57 chr17 61714304 61714953 -27789600 + L1MA7 LINE L1 5489 6123 -168 1598 180 39 20 chr17 61714953 61715259 -27789294 - AluJb SINE Alu 0 312 1 3559 147 36 57 chr17 61715259 61715324 -27789229 + L1MA7 LINE L1 6123 6188 -103 313 255 167 10 chr17 61715614 61715716 -27788837 - L2 LINE L2 -1 3312 3195 207 368 109 53 chr17 61716071 61716368 -27788185 - L2 LINE L2 -1891 1423 1095 2295 60 0 7 chr17 61716368 61716666 -27787887 + AluSg SINE Alu 1 296 -14 207 368 109 53 chr17 61716666 61716781 -27787772 - L2 LINE L2 -2219 1095 988 2053 116 7 3 chr17 61717460 61717761 -27786792 + AluSq SINE Alu 1 302 -11 2343 91 0 0 chr17 61718437 61718746 -27785807 + AluSc SINE Alu 1 309 0 458 307 59 38 chr17 61719408 61719646 -27784907 - MIR SINE MIR -8 254 12 1338 89 0 0 chr17 61719807 61719997 -27784556 + AluY SINE Alu 120 309 -2 2187 86 3 0 chr17 61720071 61720362 -27784191 - AluY SINE Alu -19 292 1 46 45 0 0 chr17 61720736 61720803 -27783750 + AT_rich Low_complexity Low_complexity 1 67 0 1535 191 31 0 chr17 61720902 61721190 -27783363 + AluJo SINE Alu 3 299 -13 507 301 165 38 chr17 61721305 61721925 -27782628 - L2 LINE L2 -214 3058 2364 438 317 88 24 chr17 61722073 61722278 -27782275 - L2 LINE L2 -1238 2076 1859 27 0 0 0 chr17 61724444 61724471 -27780082 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr17 61725480 61725503 -27779050 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr17 61726257 61726295 -27778258 + AT_rich Low_complexity Low_complexity 1 38 0 31 76 0 0 chr17 61726424 61726490 -27778063 + AT_rich Low_complexity Low_complexity 1 66 0 22 35 0 0 chr17 61726635 61726664 -27777889 + AT_rich Low_complexity Low_complexity 1 29 0 537 307 5 47 chr17 61726853 61727045 -27777508 + MER5A DNA MER1_type 6 189 0 1850 136 3 10 chr17 61727963 61728258 -27776295 + AluSx SINE Alu 1 293 -19 2150 75 0 53 chr17 61728258 61728579 -27775974 + AluY SINE Alu 1 304 -7 201 266 220 28 chr17 61729650 61729759 -27774794 + MIR SINE MIR 45 174 -88 325 153 122 41 chr17 61729835 61729933 -27774620 - Charlie8 DNA MER1_type -2235 182 77 22 35 0 0 chr17 61730173 61730202 -27774351 + AT_rich Low_complexity Low_complexity 1 29 0 708 310 89 13 chr17 61730702 61731015 -27773538 - MER93a LTR ERV1 -3 399 63 327 189 105 32 chr17 61731093 61731188 -27773365 - MER57-int LTR ERV1 -376 7161 7060 561 205 34 0 chr17 61731367 61731484 -27773069 + AluJo SINE Alu 12 132 -180 1679 169 0 3 chr17 61731507 61731797 -27772756 + AluJb SINE Alu 1 289 -23 806 103 0 0 chr17 61731814 61731921 -27772632 + U6 snRNA snRNA 1 107 0 738 87 0 61 chr17 61731924 61732039 -27772514 + MER4A LTR ERV1 524 631 -33 832 187 18 12 chr17 61732040 61732211 -27772342 + AluJo SINE Alu 120 291 -21 2184 104 0 10 chr17 61732906 61733213 -27771340 + AluSq SINE Alu 1 304 -9 294 275 0 0 chr17 61733235 61733304 -27771249 + MLT1A2 LTR MaLR 79 147 -227 211 319 159 22 chr17 61733554 61733692 -27770861 - MIR SINE MIR -76 186 30 2256 81 0 7 chr17 61734201 61734497 -27770056 + AluSq SINE Alu 1 294 -19 205 277 15 15 chr17 61735012 61735077 -27769476 - MIR3 SINE MIR -32 176 112 399 208 131 63 chr17 61735702 61735923 -27768630 - L1MC5 LINE L1 -26 7935 7700 338 328 155 6 chr17 61736745 61736919 -27767634 + MIR SINE MIR 4 203 -59 203 179 0 0 chr17 61736921 61736960 -27767593 + A-rich Low_complexity Low_complexity 1 39 0 1694 159 7 30 chr17 61738249 61738550 -27766003 + AluJo SINE Alu 7 300 -12 208 139 0 0 chr17 61739995 61740031 -27764522 + (TTTTTA)n Simple_repeat Simple_repeat 2 37 0 258 222 135 79 chr17 61741270 61741396 -27763157 - MIR3 SINE MIR -72 136 4 2127 113 3 3 chr17 61741683 61741993 -27762560 - AluSg SINE Alu 0 310 1 2036 125 3 10 chr17 61742273 61742584 -27761969 - AluSx SINE Alu -3 309 1 205 152 0 0 chr17 61742971 61743004 -27761549 + G-rich Low_complexity Low_complexity 2 34 0 852 137 0 34 chr17 61743224 61743370 -27761183 - AluSg SINE Alu -18 292 152 743 83 0 0 chr17 61743371 61743467 -27761086 - AluSg SINE Alu -213 97 2 2047 118 7 0 chr17 61744107 61744404 -27760149 + AluSx SINE Alu 1 299 -13 1665 168 24 3 chr17 61745482 61745780 -27758773 - AluJb SINE Alu -8 304 1 198 0 0 0 chr17 61745819 61745841 -27758712 + (TG)n Simple_repeat Simple_repeat 2 23 0 1846 140 3 3 chr17 61745841 61746126 -27758427 - AluSx SINE Alu -27 285 1 500 309 0 0 chr17 61746236 61746362 -27758191 - L2 LINE L2 0 3313 3188 946 269 150 6 chr17 61746447 61746807 -27757746 + L2 LINE L2 2898 3309 -4 301 160 11 53 chr17 61747086 61747274 -27757279 + (TA)n Simple_repeat Simple_repeat 1 180 0 890 115 23 0 chr17 61747338 61747512 -27757041 + (TA)n Simple_repeat Simple_repeat 1 178 0 1851 129 9 55 chr17 61747554 61747880 -27756673 - AluSq SINE Alu -2 311 1 1888 122 41 7 chr17 61748332 61748626 -27755927 + AluSq SINE Alu 1 304 -9 506 191 27 18 chr17 61748646 61748756 -27755797 - FLAM_A SINE Alu -12 130 20 2226 82 0 10 chr17 61749340 61749643 -27754910 + AluSc SINE Alu 1 300 -9 249 184 0 20 chr17 61749677 61749726 -27754827 + MLT1G1 LTR MaLR 4 51 -544 297 228 290 25 chr17 61749867 61750029 -27754524 - MIR SINE MIR -1 261 57 231 222 111 71 chr17 61751472 61751547 -27753006 + HAL1b LINE L1 1246 1327 -21 2254 132 13 24 chr17 61751547 61751926 -27752627 - THE1C LTR MaLR 0 375 1 231 222 111 71 chr17 61751926 61751949 -27752604 + HAL1b LINE L1 1327 1348 0 231 333 46 9 chr17 61752001 61752109 -27752444 - L3 LINE CR1 -106 1471 1360 1879 112 20 14 chr17 61752141 61752435 -27752118 + AluSx SINE Alu 1 296 -16 205 182 0 0 chr17 61753441 61753474 -27751079 + (CA)n Simple_repeat Simple_repeat 1 33 0 1037 255 94 84 chr17 61753834 61754513 -27750040 - MER21B LTR ERV1 -154 709 24 299 233 42 106 chr17 61754633 61754822 -27749731 - L1MC5 LINE L1 -30 7931 7755 184 271 82 71 chr17 61755517 61755602 -27748951 + MIR3 SINE MIR 119 204 -4 729 217 0 0 chr17 61758510 61758690 -27745863 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 506 210 12 12 chr17 61758702 61758864 -27745689 + (TCCA)n Simple_repeat Simple_repeat 3 164 0 461 338 60 49 chr17 61758884 61759331 -27745222 - L2 LINE L2 0 3272 2821 187 325 38 12 chr17 61759380 61759460 -27745093 + MIR SINE MIR 72 153 -55 254 349 128 5 chr17 61759904 61760099 -27744454 - L2 LINE L2 -1257 2057 1839 282 246 218 7 chr17 61760117 61760259 -27744294 + MER5B DNA MER1_type 5 176 -2 2275 100 0 3 chr17 61760406 61760715 -27743838 - AluSx SINE Alu -4 308 1 804 213 36 62 chr17 61762262 61762487 -27742066 + L1ME2 LINE L1 5937 6155 -9 1581 156 3 57 chr17 61762544 61762858 -27741695 + AluJb SINE Alu 1 297 -15 750 181 5 98 chr17 61762922 61762997 -27741556 + MER5A DNA MER1_type 2 82 -107 1640 167 0 30 chr17 61762997 61763296 -27741257 + AluJo SINE Alu 1 290 -22 750 181 5 98 chr17 61763296 61763413 -27741140 + MER5A DNA MER1_type 82 176 -13 493 221 126 32 chr17 61764676 61764866 -27739687 + MER106A DNA MER1_type 3 210 -26 191 278 139 26 chr17 61765612 61765727 -27738826 + MIR SINE MIR 77 204 -58 455 265 51 129 chr17 61765929 61765989 -27738564 - L2 LINE L2 -33 3239 3176 1562 164 14 65 chr17 61765989 61766124 -27738429 + AluJo SINE Alu 1 115 -197 2167 118 0 7 chr17 61766124 61766421 -27738132 + AluSx SINE Alu 1 295 -17 1562 164 14 65 chr17 61766421 61766578 -27737975 + AluJo SINE Alu 115 278 -34 455 265 51 129 chr17 61766578 61766890 -27737663 - L2 LINE L2 -96 3176 2896 251 266 203 21 chr17 61767960 61768103 -27736450 - MIR3 SINE MIR -24 184 16 2102 154 50 26 chr17 61768946 61769323 -27735230 + MSTB LTR MaLR 1 386 -40 2165 118 7 7 chr17 61769323 61769629 -27734924 + AluSq SINE Alu 1 306 -7 333 153 122 41 chr17 61770894 61770992 -27733561 - Charlie8 DNA MER1_type -2235 182 77 22 35 0 0 chr17 61771233 61771262 -27733291 + AT_rich Low_complexity Low_complexity 1 29 0 698 299 96 22 chr17 61771763 61772077 -27732476 - MER93a LTR ERV1 -3 399 63 326 189 105 32 chr17 61772155 61772250 -27732303 - MER57-int LTR ERV1 -376 7161 7060 563 205 34 0 chr17 61772429 61772546 -27732007 + AluJo SINE Alu 12 132 -180 1671 163 0 20 chr17 61772569 61772864 -27731689 + AluJb SINE Alu 1 289 -23 810 103 0 0 chr17 61772882 61772989 -27731564 + U6 snRNA snRNA 1 107 0 737 87 0 61 chr17 61772992 61773107 -27731446 + MER4A LTR ERV1 524 631 -33 858 186 17 17 chr17 61773108 61773280 -27731273 + AluJo SINE Alu 120 291 -21 2314 104 0 10 chr17 61773977 61774284 -27730269 + AluSq SINE Alu 1 304 -9 279 275 0 0 chr17 61774306 61774375 -27730178 + MLT1A2 LTR MaLR 79 147 -227 2389 81 0 7 chr17 61775280 61775576 -27728977 + AluSq SINE Alu 1 294 -19 1957 145 0 19 chr17 61776094 61776404 -27728149 - AluJb SINE Alu -8 304 1 434 246 16 35 chr17 61776669 61776814 -27727739 + MLT1A2 LTR MaLR 1 147 -227 24 0 0 0 chr17 61777041 61777065 -27727488 + AT_rich Low_complexity Low_complexity 1 24 0 2369 119 0 0 chr17 61777767 61778079 -27726474 + AluSq SINE Alu 1 312 -1 1918 218 160 8 chr17 61778396 61778864 -27725689 - REP3 LTR ERV -23 539 1 543 238 85 22 chr17 61779139 61779473 -27725080 + MLT1L LTR MaLR 153 538 -77 692 184 24 54 chr17 61779475 61779669 -27724884 - FRAM SINE Alu 0 176 1 263 154 0 58 chr17 61779669 61779721 -27724832 + MLT1L LTR MaLR 566 614 -1 1156 61 0 12 chr17 61779793 61779957 -27724596 + (GAA)n Simple_repeat Simple_repeat 1 162 0 2418 82 0 0 chr17 61780257 61780560 -27723993 - AluSx SINE Alu -8 304 2 717 199 7 55 chr17 61780594 61780740 -27723813 + MER5A DNA MER1_type 1 139 -50 228 239 15 15 chr17 61780860 61780927 -27723626 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 270 258 48 65 chr17 61781407 61781531 -27723022 + MIR3 SINE MIR 35 156 -52 804 247 23 0 chr17 61781535 61781709 -27722844 + MER45A DNA AcHobo 1 178 0 269 118 20 0 chr17 61782245 61782296 -27722257 + CT-rich Low_complexity Low_complexity 1 52 0 185 243 0 0 chr17 61783338 61783375 -27721178 + L2 LINE L2 3258 3294 -19 676 206 33 31 chr17 61784449 61784631 -27719922 - L1ME1 LINE L1 -5 6161 6008 315 0 0 0 chr17 61784652 61784687 -27719866 + (TTA)n Simple_repeat Simple_repeat 2 36 0 345 220 106 30 chr17 61784833 61784965 -27719588 + L2 LINE L2 2200 2341 -973 269 180 0 49 chr17 61785225 61785286 -27719267 + L2 LINE L2 3256 3313 0 1007 262 70 58 chr17 61785338 61785938 -27718615 - L1M2 LINE L1 -2413 3802 3196 796 320 72 25 chr17 61786032 61786246 -27718307 - L1M2 LINE L1 -3014 3201 2999 1897 156 7 23 chr17 61786246 61786547 -27718006 + AluJb SINE Alu 1 296 -16 796 320 72 25 chr17 61786547 61786981 -27717572 - L1M2 LINE L1 -3216 2999 2522 481 257 158 52 chr17 61786991 61787372 -27717181 - L1M2 LINE L1 -3595 2620 2200 890 244 77 48 chr17 61787818 61788130 -27716423 - L1ME1 LINE L1 -325 5845 5525 418 58 0 0 chr17 61788139 61788191 -27716362 + Alu SINE Alu 2 53 -260 2167 110 14 0 chr17 61788192 61788484 -27716069 - AluSx SINE Alu -16 296 1 461 271 83 18 chr17 61788832 61789102 -27715451 - L1M2 LINE L1 -4321 1895 1361 803 249 92 60 chr17 61789150 61789440 -27715113 - L1MEd LINE L1 -4978 1141 831 2657 23 0 10 chr17 61789440 61789742 -27714811 - AluY SINE Alu -12 299 1 803 249 92 60 chr17 61789742 61789885 -27714668 - L1MEd LINE L1 -5288 831 694 1138 268 73 38 chr17 61789948 61790399 -27714154 - L1MEd LINE L1 -5647 472 6 742 179 33 13 chr17 61790575 61790726 -27713827 - MER5B DNA MER1_type -15 163 10 257 278 111 19 chr17 61790775 61790883 -27713670 - MER5B DNA MER1_type -57 121 4 1959 128 24 3 chr17 61790933 61791223 -27713330 + AluSx SINE Alu 1 296 -16 2320 229 59 18 chr17 61791773 61792318 -27712235 + MLT1F1 LTR MaLR 1 567 0 2149 128 3 0 chr17 61793115 61793411 -27711142 - AluSx SINE Alu -15 297 1 2057 139 0 3 chr17 61793518 61793820 -27710733 - AluSx SINE Alu -6 306 6 761 301 26 16 chr17 61796210 61796519 -27708034 + L3 LINE CR1 839 1150 -427 273 363 73 40 chr17 61796753 61796877 -27707676 - L2 LINE L2 -22 3250 3123 210 302 0 0 chr17 61797275 61797328 -27707225 - L2 LINE L2 -17 3255 3203 218 103 0 26 chr17 61797854 61797893 -27706660 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 255 321 89 61 chr17 61798226 61798464 -27706089 + L2 LINE L2 2631 2888 -384 1633 170 63 0 chr17 61798464 61798734 -27705819 - AluJb SINE Alu -25 287 1 255 321 89 61 chr17 61798734 61798820 -27705733 + L2 LINE L2 2888 2970 -302 3564 143 24 36 chr17 61798897 61799050 -27705503 - L1PB4 LINE L1 -4 6152 5999 2560 80 0 0 chr17 61799050 61799361 -27705192 - AluSq SINE Alu -2 311 1 3564 143 24 36 chr17 61799361 61799864 -27704689 - L1PB4 LINE L1 -157 5999 5504 543 266 176 12 chr17 61799879 61800123 -27704430 + L2 LINE L2 3029 3312 -1 402 284 80 25 chr17 61800320 61800487 -27704066 + L2 LINE L2 3062 3247 -66 2541 50 3 10 chr17 61800487 61800787 -27703766 - AluY SINE Alu -13 298 1 402 284 80 25 chr17 61800787 61800858 -27703695 + L2 LINE L2 3247 3313 0 1788 160 21 64 chr17 61802042 61802416 -27702137 + L1MB3 LINE L1 5687 6044 -139 295 176 0 0 chr17 61802416 61802467 -27702086 - U2 snRNA snRNA -137 51 1 2235 109 3 3 chr17 61802492 61802794 -27701759 - AluSx SINE Alu -10 302 1 762 153 0 0 chr17 61802807 61802938 -27701615 + L1MB4 LINE L1 6050 6180 0 234 300 47 37 chr17 61802938 61803121 -27701432 + L1MC4a LINE L1 4649 4836 -1310 293 179 13 51 chr17 61803357 61803435 -27701118 + MIR SINE MIR 155 229 -33 393 248 28 14 chr17 61803503 61803648 -27700905 + L1MC4a LINE L1 5813 5959 -1849 227 203 78 16 chr17 61803710 61803774 -27700779 + MER91C DNA MER1_type 25 92 -48 1161 223 5 5 chr17 61804224 61804448 -27700105 + MER58A DNA MER1_type 1 224 0 193 330 23 34 chr17 61804457 61804545 -27700008 + MIR SINE MIR 20 106 -156 2280 126 126 8 chr17 61804562 61804944 -27699609 + MSTA LTR MaLR 1 427 -1 388 261 56 21 chr17 61805061 61805203 -27699350 - L1ME4a LINE L1 -159 5962 5816 604 243 95 48 chr17 61805233 61805484 -27699069 - L1MC5 LINE L1 -36 7925 7647 2096 133 13 7 chr17 61805484 61805793 -27698760 - AluSx SINE Alu -1 311 1 604 243 95 48 chr17 61805793 61805940 -27698613 - L1MC5 LINE L1 -314 7647 7508 249 314 21 16 chr17 61806038 61806166 -27698387 - L1ME4a LINE L1 -332 5789 5675 357 270 26 9 chr17 61806777 61806892 -27697661 + MIR SINE MIR 87 203 -59 619 217 123 30 chr17 61806913 61806929 -27697624 - MER20B DNA MER1_type -12 771 758 2062 146 0 0 chr17 61806929 61807224 -27697329 - AluSx SINE Alu -17 295 1 619 217 123 30 chr17 61807224 61807442 -27697111 - MER20B DNA MER1_type -25 758 515 1739 167 7 23 chr17 61807699 61808004 -27696549 + AluJo SINE Alu 1 300 -12 2264 95 0 3 chr17 61808006 61808321 -27696232 + AluSp SINE Alu 1 314 0 738 252 50 14 chr17 61808377 61808595 -27695958 - MER20B DNA MER1_type -555 228 3 231 284 17 52 chr17 61808994 61809110 -27695443 + L1MEd LINE L1 360 471 -5734 2547 75 0 3 chr17 61809122 61809429 -27695124 + AluSq SINE Alu 1 306 -7 216 167 0 0 chr17 61809503 61809551 -27695002 + (TG)n Simple_repeat Simple_repeat 2 49 0 501 272 38 6 chr17 61809621 61809779 -27694774 + L1MEd LINE L1 596 758 -5447 527 252 98 55 chr17 61810146 61810244 -27694309 + L1MEd LINE L1 1410 1502 -4894 2642 43 7 0 chr17 61810244 61810544 -27694009 + AluY SINE Alu 1 302 -9 527 252 98 55 chr17 61810544 61810719 -27693834 + L1MEd LINE L1 1502 1695 -4701 550 260 99 88 chr17 61810809 61811708 -27692845 + L1MEd LINE L1 1858 2718 -3497 1614 281 25 9 chr17 61811720 61812151 -27692402 - LTR16B LTR ERVL -22 442 5 2659 267 52 17 chr17 61812200 61812592 -27691961 + L1MEd LINE L1 2710 3087 -3128 2226 119 10 0 chr17 61812592 61812902 -27691651 + AluSp SINE Alu 1 313 0 2659 267 52 17 chr17 61812902 61813526 -27691027 + L1MEd LINE L1 3087 3769 -2446 1941 152 20 3 chr17 61813526 61813828 -27690725 + AluJb SINE Alu 1 307 -5 2659 267 52 17 chr17 61813828 61813916 -27690637 + L1MEd LINE L1 3769 3853 -2362 1951 143 81 38 chr17 61813926 61814052 -27690501 + Tigger7 DNA MER2_type 2 121 -2466 2341 108 0 0 chr17 61814052 61814357 -27690196 - AluSx SINE Alu -7 305 1 1951 143 81 38 chr17 61814357 61814737 -27689816 + Tigger7 DNA MER2_type 121 2587 0 682 277 63 18 chr17 61814747 61815336 -27689217 + L1MEd LINE L1 3884 4594 -1621 * 1166 230 72 42 chr17 61815332 61815420 -27689133 - L1MEc LINE L1 -4174 2433 2349 2701 17 0 7 chr17 61815420 61815722 -27688831 - AluYb8 SINE Alu -18 300 1 1166 230 72 42 chr17 61815722 61816089 -27688464 - L1MEc LINE L1 -4258 2349 1964 486 0 0 0 chr17 61816089 61816143 -27688410 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 843 153 0 0 chr17 61816149 61816267 -27688286 - FLAM_C SINE Alu -25 118 1 1511 253 67 44 chr17 61816275 61816444 -27688109 - L1MEc LINE L1 -4640 1967 1803 306 0 0 0 chr17 61816444 61816478 -27688075 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1511 253 67 44 chr17 61816478 61817007 -27687546 - L1MEc LINE L1 -4804 1803 1253 1439 148 7 67 chr17 61816982 61817279 -27687274 - L1MC1 LINE L1 0 6613 6335 716 128 0 18 chr17 61817279 61817388 -27687165 - MER46A DNA MER2_type 0 236 130 317 264 0 23 chr17 61817377 61817464 -27687089 + MER46A DNA MER2_type 62 146 -90 * 4332 145 10 49 chr17 61817464 61817732 -27686821 - L1MC1 LINE L1 -279 6054 5777 1970 147 0 3 chr17 61817732 61818018 -27686535 + AluJb SINE Alu 1 285 -27 4332 145 10 49 chr17 61818018 61818529 -27686024 - L1MC1 LINE L1 -556 5777 5305 1672 185 10 23 chr17 61818531 61818834 -27685719 - AluJo SINE Alu -13 299 1 2936 196 29 36 chr17 61818834 61819523 -27685030 - L1MC1 LINE L1 -947 5199 4516 473 48 0 16 chr17 61819526 61819588 -27684965 - HY4 scRNA scRNA -31 62 2 1788 151 11 91 chr17 61819646 61820010 -27684543 + MER2 DNA MER2_type 1 335 -10 2660 131 85 20 chr17 61820020 61820394 -27684159 + L1MCa LINE L1 1769 2190 -4236 1907 144 32 0 chr17 61820394 61820679 -27683874 + AluSx SINE Alu 1 294 -18 2660 131 85 20 chr17 61820679 61820847 -27683706 + L1MCa LINE L1 2190 2346 -4080 * 3096 149 15 98 chr17 61820845 61821301 -27683252 - L1MEc LINE L1 -5164 1262 770 2055 146 0 0 chr17 61821301 61821595 -27682958 - AluSx SINE Alu -17 295 2 3096 149 15 98 chr17 61821595 61821687 -27682866 - L1MEc LINE L1 -5656 770 672 1854 175 3 3 chr17 61821687 61821990 -27682563 + AluJo SINE Alu 1 303 -9 3096 149 15 98 chr17 61821990 61822196 -27682357 - L1MEc LINE L1 -5754 672 570 2687 176 63 58 chr17 61822196 61822356 -27682197 - L1MEc LINE L1 -5811 615 457 405 0 0 0 chr17 61822356 61822401 -27682152 + (CA)n Simple_repeat Simple_repeat 2 46 0 2687 176 63 58 chr17 61822401 61822847 -27681706 - L1MEc LINE L1 -5969 457 6 317 132 0 0 chr17 61822910 61822963 -27681590 - Alu SINE Alu -2 300 248 7684 132 3 6 chr17 61823048 61824169 -27680384 + Tigger7 DNA MER2_type 1 1117 -1370 511 116 0 0 chr17 61824165 61824234 -27680319 + Tigger7 DNA MER2_type 2415 2483 -8 * 304 207 37 0 chr17 61824237 61824319 -27680234 - L1MEc LINE L1 -5451 945 861 21 0 0 0 chr17 61824441 61824462 -27680091 + AT_rich Low_complexity Low_complexity 1 21 0 228 386 0 0 chr17 61824531 61824601 -27679952 - L2 LINE L2 0 3272 3203 23 33 0 0 chr17 61824607 61824637 -27679916 + AT_rich Low_complexity Low_complexity 1 30 0 384 239 112 56 chr17 61824657 61824786 -27679767 - MIR SINE MIR 0 262 117 1743 178 20 3 chr17 61824786 61825078 -27679475 + AluJb SINE Alu 1 297 -15 384 239 112 56 chr17 61825078 61825145 -27679408 - MIR SINE MIR -145 117 55 752 242 149 106 chr17 61825152 61825710 -27678843 + MLT1K LTR MaLR 7 588 0 1863 168 0 10 chr17 61825779 61826070 -27678483 + AluJo SINE Alu 1 288 -24 26 30 0 0 chr17 61826070 61826103 -27678450 + AT_rich Low_complexity Low_complexity 1 33 0 4864 228 49 13 chr17 61828056 61828609 -27675944 - L1ME1 LINE L1 0 6166 5634 2146 125 0 10 chr17 61828609 61828904 -27675649 + AluSx SINE Alu 1 292 -20 4864 228 49 13 chr17 61828904 61830379 -27674174 - L1ME1 LINE L1 -532 5634 4065 429 261 56 7 chr17 61830710 61830852 -27673701 - MIR SINE MIR -109 153 5 3374 146 2 26 chr17 61831440 61832007 -27672546 + L1MB5 LINE L1 5622 6174 0 233 361 118 0 chr17 61832110 61832254 -27672299 + L2 LINE L2 2596 2756 -558 312 315 9 0 chr17 61832357 61832465 -27672088 + L2 LINE L2 3157 3265 -7 2178 134 0 3 chr17 61832931 61833267 -27671286 + AluSx SINE Alu 1 335 0 370 255 161 7 chr17 61834067 61834216 -27670337 - MIR SINE MIR -70 192 21 198 0 0 0 chr17 61834827 61834849 -27669704 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 312 252 135 68 chr17 61834851 61835073 -27669480 - L2 LINE L2 -4 3268 3032 2334 102 0 0 chr17 61835707 61836000 -27668553 - AluSc SINE Alu -16 293 1 625 217 5 79 chr17 61836036 61836225 -27668328 + LTR16A1 LTR ERVL 279 453 -4 560 159 24 87 chr17 61836279 61836305 -27668248 + ORSL DNA AcHobo 1 27 -248 894 180 21 21 chr17 61836305 61836494 -27668059 + MER53 DNA DNA 1 189 0 560 159 24 87 chr17 61836494 61836593 -27667960 + ORSL DNA AcHobo 27 118 -157 1527 154 15 117 chr17 61836593 61836729 -27667824 + AluJo SINE Alu 1 87 -215 2071 132 3 7 chr17 61836729 61837025 -27667528 - AluSx SINE Alu -17 295 1 1527 154 15 117 chr17 61837025 61837212 -27667341 + AluJo SINE Alu 87 291 -11 2252 100 10 3 chr17 61837237 61837538 -27667015 + AluSx SINE Alu 1 303 -9 440 171 67 57 chr17 61837600 61837705 -27666848 + ORSL DNA AcHobo 170 275 0 886 194 71 0 chr17 61838155 61838325 -27666228 + MER58A DNA MER1_type 37 218 -6 409 346 50 6 chr17 61839688 61839847 -27664706 - L2 LINE L2 -5 3267 3102 304 228 79 20 chr17 61840352 61840453 -27664100 - MLT1L LTR MaLR 0 615 509 1178 245 26 79 chr17 61840670 61841086 -27663467 - MLT1L LTR MaLR -221 394 1 2085 146 10 0 chr17 61841109 61841404 -27663149 - AluJb SINE Alu -14 298 1 1398 213 84 86 chr17 61842146 61842692 -27661861 + MLT1H LTR MaLR 5 549 0 2073 118 3 3 chr17 61842905 61843193 -27661360 - AluSx SINE Alu -20 292 5 1881 146 45 0 chr17 61843379 61843667 -27660886 + AluJb SINE Alu 1 301 -11 624 209 8 16 chr17 61844883 61845012 -27659541 - AluJ SINE Alu -1 311 184 867 130 24 0 chr17 61845012 61845135 -27659418 - AluJ SINE Alu -186 126 1 906 168 0 54 chr17 61845145 61845330 -27659223 - AluJo SINE Alu -23 289 115 271 330 9 19 chr17 61845567 61845673 -27658880 + MIR SINE MIR 50 154 -108 906 296 33 10 chr17 61845771 61846072 -27658481 - MLT1I LTR MaLR 0 409 102 253 291 66 40 chr17 61846156 61846307 -27658246 - MLT1J LTR MaLR -23 488 334 1707 137 4 15 chr17 61846941 61847211 -27657342 - AluSx SINE Alu -45 267 1 1264 157 11 0 chr17 61847569 61847760 -27656793 - AluJo SINE Alu -19 293 101 22 35 0 0 chr17 61847782 61847811 -27656742 + AT_rich Low_complexity Low_complexity 1 29 0 752 103 0 9 chr17 61847813 61847920 -27656633 - AluJo SINE Alu -195 117 12 2009 136 7 3 chr17 61848646 61848941 -27655612 + AluSx SINE Alu 1 296 -16 600 260 72 49 chr17 61849314 61849332 -27655221 + MIR SINE MIR 16 32 -230 2190 226 51 39 chr17 61849332 61849770 -27654783 - MLT1E LTR MaLR 0 593 144 2407 63 3 3 chr17 61849770 61850095 -27654458 + AluY SINE Alu 1 325 0 2190 226 51 39 chr17 61850095 61850240 -27654313 - MLT1E LTR MaLR -449 144 2 600 260 72 49 chr17 61850240 61850444 -27654109 + MIR SINE MIR 32 243 -19 219 286 72 103 chr17 61851834 61852096 -27652457 - L2 LINE L2 0 3272 3019 951 116 53 84 chr17 61852433 61852623 -27651930 - AluJb SINE Alu 0 312 129 2219 120 0 0 chr17 61852819 61853111 -27651442 - AluSx SINE Alu -20 292 1 1123 117 128 174 chr17 61853140 61853385 -27651168 + L1MB5 LINE L1 5814 6069 -105 1780 83 0 9 chr17 61853385 61853615 -27650938 + AluY SINE Alu 1 228 -83 1123 117 128 174 chr17 61853615 61853703 -27650850 + L1MB5 LINE L1 6069 6132 -42 2263 85 0 0 chr17 61853703 61854046 -27650507 + AluY SINE Alu 1 343 0 1123 117 128 174 chr17 61854046 61854078 -27650475 + L1MB5 LINE L1 6132 6164 -10 25 0 0 0 chr17 61854079 61854104 -27650449 + AT_rich Low_complexity Low_complexity 1 25 0 2239 123 3 0 chr17 61854585 61854894 -27649659 + AluSx SINE Alu 3 312 0 2018 253 42 82 chr17 61855223 61855967 -27648586 - L1MEc LINE L1 -5633 763 50 2437 241 39 71 chr17 61855980 61856100 -27648453 + L1ME2 LINE L1 3370 3492 -2654 2258 122 0 0 chr17 61856100 61856411 -27648142 + AluSq SINE Alu 1 311 -2 2437 241 39 71 chr17 61856411 61856463 -27648090 + L1ME2 LINE L1 3492 3544 -2602 2288 94 3 3 chr17 61856463 61856760 -27647793 + AluY SINE Alu 1 297 -14 2437 241 39 71 chr17 61856760 61856989 -27647564 + L1ME2 LINE L1 3544 3779 -2367 1607 161 16 71 chr17 61856989 61857300 -27647253 + AluJo SINE Alu 1 294 -18 2437 241 39 71 chr17 61857300 61857415 -27647138 + L1ME2 LINE L1 3779 3896 -2250 2149 144 0 3 chr17 61857415 61857728 -27646825 + AluJb SINE Alu 1 312 0 2437 241 39 71 chr17 61857728 61858039 -27646514 + L1ME2 LINE L1 3896 4161 -1985 486 0 0 0 chr17 61858039 61858093 -27646460 + (TA)n Simple_repeat Simple_repeat 1 54 0 2437 241 39 71 chr17 61858093 61858315 -27646238 + L1ME2 LINE L1 4161 4389 -1757 652 97 43 0 chr17 61858315 61858408 -27646145 + AluJo SINE Alu 38 134 -178 2794 191 47 95 chr17 61858408 61859144 -27645409 + L1ME2 LINE L1 4372 5141 -1023 2159 141 0 0 chr17 61859144 61859443 -27645110 - AluSx SINE Alu -12 300 2 2794 191 47 95 chr17 61859443 61859626 -27644927 + L1ME2 LINE L1 5141 5331 -833 1217 185 68 102 chr17 61859626 61859978 -27644575 + MER2 DNA MER2_type 1 340 -4 2794 191 47 95 chr17 61859978 61860067 -27644486 + L1ME2 LINE L1 5331 5423 -741 2191 72 61 0 chr17 61860067 61860346 -27644207 + AluSp SINE Alu 1 296 -17 2794 191 47 95 chr17 61860346 61860579 -27643974 + L1ME2 LINE L1 5423 5666 -498 2048 54 0 0 chr17 61860579 61860820 -27643733 - AluY SINE Alu -13 298 58 2794 191 47 95 chr17 61860820 61860889 -27643664 + L1ME2 LINE L1 5666 5737 -427 912 128 0 0 chr17 61860889 61861022 -27643531 - FLAM_C SINE Alu 0 133 1 2794 191 47 95 chr17 61861022 61861213 -27643340 + L1ME2 LINE L1 5737 5812 -352 304 100 0 0 chr17 61861214 61861254 -27643299 - MLT1A1 LTR MaLR 0 365 326 229 154 19 58 chr17 61861249 61861301 -27643252 - MLT1C LTR MaLR -74 393 344 * 510 203 74 3 chr17 61861310 61861438 -27643115 - MLT1B LTR MaLR -253 137 1 729 212 119 31 chr17 61861491 61861717 -27642836 + L1ME2 LINE L1 5910 6155 -9 638 231 0 58 chr17 61861728 61861901 -27642652 - L1MC4a LINE L1 -1958 5850 5688 594 241 37 37 chr17 61862242 61862433 -27642120 - MIR SINE MIR -25 237 47 1035 142 0 13 chr17 61862456 61862611 -27641942 - FRAM SINE Alu -25 151 1 284 233 0 0 chr17 61862777 61862837 -27641716 + MIR SINE MIR 203 262 0 788 238 65 140 chr17 61864150 61864501 -27640052 + HAL1 LINE L1 1155 1440 -1067 1859 104 36 4 chr17 61864501 61864750 -27639803 - AluSx SINE Alu -55 257 1 788 238 65 140 chr17 61864750 61865028 -27639525 + HAL1 LINE L1 1440 1737 -770 498 193 141 42 chr17 61865610 61865745 -27638808 + HAL1 LINE L1 2164 2329 -178 2350 96 3 10 chr17 61865745 61866058 -27638495 + AluSx SINE Alu 1 311 -1 498 193 141 42 chr17 61866058 61866135 -27638418 + HAL1 LINE L1 2329 2397 -110 206 240 33 99 chr17 61866402 61866523 -27638030 - MIR SINE MIR -56 206 94 344 285 98 72 chr17 61867127 61867362 -27637191 - MIR SINE MIR -5 257 17 561 242 106 8 chr17 61867406 61867538 -27637015 - MIR SINE MIR -92 170 26 2497 128 88 42 chr17 61867801 61867841 -27636712 - L1MB3 LINE L1 -6 6177 6140 1575 106 0 28 chr17 61867841 61868059 -27636494 - AluSg/x SINE Alu -16 296 85 2141 120 3 3 chr17 61868059 61868360 -27636193 - AluSx SINE Alu -3 309 9 2497 128 88 42 chr17 61868360 61868636 -27635917 - L1MB3 LINE L1 -43 6140 5878 1913 142 3 20 chr17 61868636 61868931 -27635622 - AluJb SINE Alu -22 290 1 2497 128 88 42 chr17 61868931 61869113 -27635440 - L1MB3 LINE L1 -305 5878 5650 2435 113 102 8 chr17 61869113 61869504 -27635049 + MSTA LTR MaLR 1 428 0 2497 128 88 42 chr17 61869504 61869525 -27635028 - L1MB3 LINE L1 -533 5650 5631 3677 182 42 68 chr17 61869619 61870757 -27633796 + L1MC1 LINE L1 5215 6325 -8 1978 145 13 34 chr17 61870759 61871138 -27633415 + L1MB7 LINE L1 5814 6184 0 1874 158 25 0 chr17 61871162 61871447 -27633106 + AluJo SINE Alu 12 303 -9 197 261 22 0 chr17 61871939 61871985 -27632568 - L3 LINE CR1 -3 1574 1528 443 275 89 52 chr17 61872341 61872554 -27631999 + MIR SINE MIR 25 241 -21 181 171 29 0 chr17 61872530 61872565 -27631988 + L2 LINE L2 3263 3298 -15 * 284 368 73 17 chr17 61872594 61872828 -27631725 - L3 LINE CR1 -153 1424 1178 235 157 0 39 chr17 61873130 61873181 -27631372 - MLT1H LTR MaLR -386 163 115 542 307 104 69 chr17 61873304 61873372 -27631181 + L2 LINE L2 2798 2862 -451 2157 142 0 0 chr17 61873372 61873674 -27630879 - AluSx SINE Alu -10 302 1 542 307 104 69 chr17 61873674 61874076 -27630477 + L2 LINE L2 2862 3289 -24 2415 112 0 0 chr17 61874076 61874388 -27630165 - AluSx SINE Alu 0 312 1 542 307 104 69 chr17 61874388 61874414 -27630139 + L2 LINE L2 3289 3313 0 301 360 40 23 chr17 61875115 61875290 -27629263 + MIR SINE MIR 35 212 -50 767 274 77 26 chr17 61876029 61876339 -27628214 + MER21B LTR ERV1 414 739 -124 1022 217 55 15 chr17 61876407 61876679 -27627874 + L1MB7 LINE L1 3863 4145 -2001 4767 164 23 17 chr17 61876725 61877290 -27627263 + L1MB7 LINE L1 4734 5294 -890 1799 198 0 0 chr17 61877290 61877598 -27626955 + AluJo SINE Alu 1 308 -4 4767 164 23 17 chr17 61877598 61878447 -27626106 + L1MB7 LINE L1 5294 6162 -22 2224 70 56 0 chr17 61878449 61878735 -27625818 - AluY SINE Alu -5 306 5 1830 160 7 26 chr17 61878739 61879046 -27625507 - AluSx SINE Alu -11 301 1 1910 136 67 28 chr17 61879253 61879614 -27624939 - THE1C LTR MaLR 0 375 1 265 365 53 42 chr17 61880427 61880616 -27623937 + L2 LINE L2 2987 3177 -95 236 262 48 12 chr17 61880631 61880715 -27623838 + MIR3 SINE MIR 87 173 -35 945 159 0 59 chr17 61880755 61880786 -27623767 - AluJo/FRAM SINE Alu -5 297 266 2279 123 0 7 chr17 61880786 61881096 -27623457 + AluSx SINE Alu 1 308 -4 945 159 0 59 chr17 61881096 61881234 -27623319 - AluJo/FRAM SINE Alu -36 266 138 1865 84 6 128 chr17 61881234 61881586 -27622967 - AluY SINE Alu 0 314 2 814 176 0 0 chr17 61881608 61881733 -27622820 - FLAM_C SINE Alu -8 125 1 1784 116 48 24 chr17 61881743 61882035 -27622518 - AluSq SINE Alu -14 299 1 1692 179 31 7 chr17 61882085 61882376 -27622177 + AluSx SINE Alu 1 298 -14 286 238 12 12 chr17 61882376 61882456 -27622097 + Charlie8 DNA MER1_type 121 200 -2217 996 119 0 0 chr17 61882475 61882609 -27621944 + AluSp SINE Alu 1 134 -179 2457 97 7 0 chr17 61882624 61882934 -27621619 + AluSq SINE Alu 1 312 -1 609 221 143 0 chr17 61883897 61884051 -27620502 + MER5B DNA MER1_type 2 177 -1 1172 191 0 0 chr17 61884065 61884254 -27620299 + MER5A DNA MER1_type 1 189 0 401 303 0 0 chr17 61884254 61884343 -27620210 + MER5A DNA MER1_type 99 187 -2 * 453 280 10 0 chr17 61884343 61884435 -27620118 + MER5A DNA MER1_type 97 189 0 464 297 0 0 chr17 61884435 61884526 -27620027 + MER5A DNA MER1_type 99 189 0 228 198 270 63 chr17 61884778 61884889 -27619664 - MIR SINE MIR 0 262 129 537 360 131 3 chr17 61885569 61885824 -27618729 + L2 LINE L2 2865 3187 -126 624 160 292 0 chr17 61885824 61885968 -27618585 - MER5A DNA MER1_type 0 189 4 537 360 131 3 chr17 61885968 61886095 -27618458 + L2 LINE L2 3187 3296 -17 744 179 0 0 chr17 61886113 61886230 -27618323 - FLAM_C SINE Alu -25 118 2 469 276 71 0 chr17 61886277 61886404 -27618149 + MIR SINE MIR 15 150 -112 244 224 0 0 chr17 61886404 61886453 -27618100 - MER45 DNA AcHobo 0 1581 1533 1929 124 44 78 chr17 61886457 61886843 -27617710 - THE1C LTR MaLR -2 373 1 270 284 45 11 chr17 61886843 61886931 -27617622 - MER45 DNA AcHobo -857 96 6 375 296 0 19 chr17 61886948 61887056 -27617497 + MIR SINE MIR 146 251 -11 2325 110 0 0 chr17 61887151 61887443 -27617110 - AluSx SINE Alu -20 292 1 899 148 0 0 chr17 61887574 61887702 -27616851 - FLAM_C SINE Alu -4 129 2 1306 135 22 17 chr17 61887790 61888020 -27616533 + MER50 LTR ERV1 10 240 -494 * 1772 134 0 14 chr17 61888003 61888286 -27616267 + MER50 LTR ERV1 433 711 -23 251 269 58 39 chr17 61889052 61889156 -27615397 + MIR SINE MIR 31 136 -126 1837 218 127 19 chr17 61889728 61890302 -27614251 + L1ME3 LINE L1 5525 6160 -2 2574 135 98 24 chr17 61890326 61890684 -27613869 - MER21A LTR ERV1 -6 925 516 2079 125 3 0 chr17 61890684 61890972 -27613581 + AluSx SINE Alu 1 289 -23 2574 135 98 24 chr17 61890972 61891124 -27613429 - MER21A LTR ERV1 -415 516 377 1243 156 51 27 chr17 61891125 61891208 -27613345 - MER21A LTR ERV1 -668 263 183 2140 145 0 0 chr17 61891208 61891505 -27613048 + AluSx SINE Alu 1 297 -15 1243 156 51 27 chr17 61891505 61891677 -27612876 - MER21A LTR ERV1 -748 183 2 511 254 7 7 chr17 61892276 61892378 -27612175 + MER45A DNA AcHobo 1 105 -1476 2484 89 0 0 chr17 61892378 61892680 -27611873 - AluSq SINE Alu -11 302 1 511 254 7 7 chr17 61892680 61892715 -27611838 + MER45A DNA AcHobo 104 138 -1443 650 114 124 9 chr17 61892726 61892831 -27611722 - FLAM_C SINE Alu -15 118 2 264 153 71 71 chr17 61892832 61892917 -27611636 + MER45A DNA AcHobo 94 178 0 524 258 140 31 chr17 61892920 61893149 -27611404 + MIR SINE MIR 7 260 -2 214 180 40 20 chr17 61893645 61893694 -27610859 + MIR SINE MIR 96 145 -117 779 274 62 8 chr17 61893694 61893935 -27610618 + MIR SINE MIR 3 256 -6 595 266 27 32 chr17 61894190 61894223 -27610330 - MIR3 SINE MIR -7 201 169 1911 142 36 20 chr17 61894223 61894525 -27610028 + AluJb SINE Alu 1 307 -5 595 266 27 32 chr17 61894525 61894679 -27609874 - MIR3 SINE MIR -39 169 15 378 237 43 11 chr17 61895674 61895767 -27608786 + MIR SINE MIR 55 150 -112 484 234 18 9 chr17 61895772 61895883 -27608670 + L2 LINE L2 3202 3313 0 1770 177 0 21 chr17 61895885 61896209 -27608344 + AluJo SINE Alu 1 318 0 465 256 153 28 chr17 61896254 61896469 -27608084 - MIR SINE MIR 0 262 21 2161 141 0 3 chr17 61896826 61897139 -27607414 + AluSx SINE Alu 1 312 0 207 276 229 0 chr17 61897157 61897262 -27607291 - MIR3 SINE MIR -34 174 46 2409 109 0 3 chr17 61897587 61897899 -27606654 - AluSx SINE Alu -1 311 1 219 159 0 0 chr17 61897899 61897934 -27606619 + MIR SINE MIR 113 146 -116 396 173 0 40 chr17 61898427 61898502 -27606051 - tRNA-Glu-GAG tRNA tRNA -3 72 1 982 172 34 60 chr17 61898514 61898537 -27606016 - L1MD3 LINE L1 0 7995 7973 2248 112 0 10 chr17 61898537 61898841 -27605712 + AluSx SINE Alu 1 301 -11 982 172 34 60 chr17 61898841 61899085 -27605468 - L1MD3 LINE L1 -22 7973 7735 1405 241 56 54 chr17 61899506 61899753 -27604800 - L2 LINE L2 0 3313 3068 1619 120 120 12 chr17 61899753 61900012 -27604541 - AluJo SINE Alu -25 287 1 1405 241 56 54 chr17 61900012 61900261 -27604292 - L2 LINE L2 -245 3068 2816 1248 217 48 62 chr17 61900740 61901107 -27603446 + L1ME1 LINE L1 5735 6097 -69 2223 112 0 3 chr17 61901107 61901403 -27603150 + AluSx SINE Alu 1 295 -17 1248 217 48 62 chr17 61901403 61901473 -27603080 + L1ME1 LINE L1 6097 6166 0 233 246 53 0 chr17 61901560 61901674 -27602879 + (TA)n Simple_repeat Simple_repeat 2 121 0 621 214 156 21 chr17 61903338 61903530 -27601023 - MIR SINE MIR 0 262 45 312 288 76 17 chr17 61903981 61904099 -27600454 - L2 LINE L2 -1 3271 3147 2335 110 7 0 chr17 61904420 61904729 -27599824 + AluSx SINE Alu 1 311 -1 239 215 15 0 chr17 61904737 61904802 -27599751 + GA-rich Low_complexity Low_complexity 3 68 0 198 222 0 0 chr17 61906042 61906132 -27598421 + CT-rich Low_complexity Low_complexity 2 91 0 426 208 0 0 chr17 61906138 61906297 -27598256 + C-rich Low_complexity Low_complexity 2 160 0 519 201 0 0 chr17 61906358 61906537 -27598016 + C-rich Low_complexity Low_complexity 2 180 0 466 201 9 9 chr17 61906566 61906799 -27597754 + C-rich Low_complexity Low_complexity 1 233 0 344 208 0 33 chr17 61906810 61906993 -27597560 + C-rich Low_complexity Low_complexity 2 178 0 495 212 0 0 chr17 61907022 61907281 -27597272 + C-rich Low_complexity Low_complexity 1 259 0 351 178 346 0 chr17 61907357 61907458 -27597095 - MER5A DNA MER1_type -2 187 52 191 186 186 0 chr17 61907753 61907796 -27596757 - MIR SINE MIR -104 104 54 219 277 12 36 chr17 61908119 61908202 -27596351 - MER5A DNA MER1_type -108 81 1 550 209 118 26 chr17 61908246 61908319 -27596234 - MER33 DNA MER1_type -2265 359 294 1676 61 5 38 chr17 61908319 61908532 -27596021 + AluY SINE Alu 93 298 -13 550 209 118 26 chr17 61908532 61908704 -27595849 - MER33 DNA MER1_type -2330 294 4 418 225 0 0 chr17 61908756 61908845 -27595708 - MIR SINE MIR -9 253 165 2291 118 3 0 chr17 61909272 61909577 -27594976 - AluSq SINE Alu -7 306 1 229 297 14 27 chr17 61909582 61909650 -27594903 - MER5B DNA MER1_type 0 178 111 1996 148 14 0 chr17 61909650 61909941 -27594612 + AluJb SINE Alu 5 299 -13 1073 268 110 30 chr17 61909959 61910275 -27594278 + L1ME3 LINE L1 5591 5963 -199 2659 46 0 0 chr17 61910275 61910581 -27593972 - AluY SINE Alu -4 307 2 1073 268 110 30 chr17 61910581 61910764 -27593789 + L1ME3 LINE L1 5963 6130 -32 310 308 13 0 chr17 61910818 61910896 -27593657 + MER5B DNA MER1_type 55 133 -45 267 173 173 0 chr17 61910950 61911002 -27593551 + MER5B DNA MER1_type 114 174 -4 222 200 271 0 chr17 61911072 61911142 -27593411 - MER5A DNA MER1_type -87 102 14 2235 125 0 0 chr17 61911337 61911642 -27592911 + AluSx SINE Alu 1 305 -7 698 213 81 0 chr17 61911741 61911901 -27592652 - MER58B DNA MER1_type 0 341 169 1906 135 68 4 chr17 61912188 61912469 -27592084 - AluJb SINE Alu -13 299 1 207 250 0 0 chr17 61912968 61913008 -27591545 + L2 LINE L2 3210 3249 -23 235 316 53 9 chr17 61913279 61913393 -27591160 - MIR3 SINE MIR -3 205 87 627 306 101 16 chr17 61913486 61913793 -27590760 - MLT1I LTR MaLR -35 374 42 1771 158 10 23 chr17 61913896 61914199 -27590354 + AluJo SINE Alu 1 299 -13 1254 168 140 3 chr17 61914473 61914758 -27589795 + MER33 DNA MER1_type 1 324 0 1807 147 48 3 chr17 61914835 61915127 -27589426 - AluSx SINE Alu -7 305 1 249 274 204 30 chr17 61915377 61915578 -27588975 + MIR SINE MIR 12 247 -15 587 222 37 7 chr17 61915957 61916092 -27588461 + L1M4 LINE L1 19 157 -6385 181 91 30 30 chr17 61916654 61916687 -27587866 - MIR SINE MIR -113 149 117 2408 85 26 0 chr17 61918599 61918904 -27585649 + AluSq SINE Alu 1 313 0 2321 120 0 3 chr17 61919003 61919312 -27585241 - AluSx SINE Alu -4 308 1 795 208 7 0 chr17 61919411 61919565 -27584988 - MER20 DNA MER1_type 0 219 65 1805 156 44 22 chr17 61919785 61920150 -27584403 + THE1C LTR MaLR 1 373 -2 231 161 0 0 chr17 61920613 61920669 -27583884 + (CCA)n Simple_repeat Simple_repeat 1 56 0 367 248 93 0 chr17 61920713 61920841 -27583712 - MIR SINE MIR -39 169 28 208 276 195 0 chr17 61921296 61921383 -27583170 - MIR SINE MIR -71 191 88 582 227 113 0 chr17 61921598 61921739 -27582814 + MER5A DNA MER1_type 1 157 -32 507 198 127 8 chr17 61922120 61922246 -27582307 - FLAM_C SINE Alu -1 142 2 260 216 136 45 chr17 61923602 61923690 -27580863 + MIR SINE MIR 90 185 -77 183 100 0 0 chr17 61923831 61923861 -27580692 + (A)n Simple_repeat Simple_repeat 1 30 0 1855 114 0 0 chr17 61924904 61925149 -27579404 + AluSx SINE Alu 64 308 -4 527 223 194 0 chr17 61927065 61927240 -27577313 - MIR SINE MIR -21 241 33 338 274 97 0 chr17 61927879 61927992 -27576561 + L1ME4a LINE L1 5714 5837 -284 23 54 0 0 chr17 61927999 61928036 -27576517 + AT_rich Low_complexity Low_complexity 1 37 0 243 236 132 9 chr17 61928075 61928181 -27576372 + L1ME4a LINE L1 5970 6088 -33 23 0 0 0 chr17 61930307 61930330 -27574223 + AT_rich Low_complexity Low_complexity 1 23 0 349 256 65 36 chr17 61930330 61930498 -27574055 + MER104 DNA Tc2 8 180 0 186 43 0 0 chr17 61931051 61931074 -27573479 + (CA)n Simple_repeat Simple_repeat 2 24 0 721 178 0 7 chr17 61931108 61931243 -27573310 + AluJo SINE Alu 2 135 -177 1860 209 52 10 chr17 61933923 61934324 -27570229 + MER47B DNA MER2_type 1 418 0 1758 102 0 33 chr17 61934478 61934723 -27569830 + AluSq SINE Alu 1 237 -76 217 271 148 33 chr17 61934865 61934987 -27569566 + MIR SINE MIR 124 259 -3 351 298 0 11 chr17 61935158 61935252 -27569301 - MER5B DNA MER1_type -84 94 2 344 286 7 64 chr17 61935264 61935404 -27569149 + MER5A DNA MER1_type 4 135 -54 1690 117 62 0 chr17 61935677 61935934 -27568619 - AluSx SINE Alu -39 273 1 1953 108 27 30 chr17 61935973 61936269 -27568284 + AluY SINE Alu 1 295 -16 487 191 19 9 chr17 61936526 61936631 -27567922 + FLAM_A SINE Alu 18 123 -19 230 308 77 11 chr17 61936930 61937021 -27567532 - L1M4 LINE L1 -1826 4320 4224 749 180 48 6 chr17 61937077 61937244 -27567309 + MER5B DNA MER1_type 5 178 0 1298 131 112 67 chr17 61937250 61937518 -27567035 + AluSx SINE Alu 1 280 -32 22 0 0 30 chr17 61937687 61937698 -27566855 + AT_rich Low_complexity Low_complexity 1 11 -21 1564 107 5 5 chr17 61937698 61937913 -27566640 - AluSp SINE Alu -14 299 85 22 0 0 30 chr17 61937913 61937934 -27566619 + AT_rich Low_complexity Low_complexity 11 32 0 2015 134 29 10 chr17 61938097 61938277 -27566276 - AluSx SINE Alu 0 312 122 297 51 0 0 chr17 61938277 61938316 -27566237 + (TG)n Simple_repeat Simple_repeat 2 40 0 2015 134 29 10 chr17 61938316 61938441 -27566112 - AluSx SINE Alu -190 122 1 2396 69 10 23 chr17 61939680 61939984 -27564569 + AluY SINE Alu 1 300 -11 441 202 19 29 chr17 61941766 61941870 -27562683 + MER3 DNA MER1_type 52 154 -55 195 42 0 0 chr17 61943256 61943280 -27561273 + (A)n Simple_repeat Simple_repeat 1 24 0 1610 147 57 39 chr17 61943295 61943574 -27560979 + AluJb SINE Alu 8 291 -21 324 235 148 0 chr17 61943743 61943824 -27560729 - HAL1 LINE L1 -1871 636 544 1849 156 30 17 chr17 61943835 61944137 -27560416 + AluJo SINE Alu 1 306 -6 356 279 178 35 chr17 61944361 61944928 -27559625 + HAL1 LINE L1 1672 2319 -188 472 232 187 0 chr17 61945507 61945662 -27558891 + MER105 DNA DNA 1 184 -20 326 325 16 32 chr17 61945708 61945896 -27558657 - L2 LINE L2 -222 3050 2866 1608 185 14 28 chr17 61946752 61947065 -27557488 + AluJo SINE Alu 1 309 0 223 192 64 103 chr17 61948044 61948122 -27556431 + MIR SINE MIR 113 187 -75 664 228 88 5 chr17 61949144 61949337 -27555216 + MER3 DNA MER1_type 1 209 0 21 0 0 0 chr17 61949384 61949405 -27555148 + AT_rich Low_complexity Low_complexity 1 21 0 36 53 0 0 chr17 61953384 61953441 -27551112 + GC_rich Low_complexity Low_complexity 1 57 0 2733 36 0 0 chr17 61954497 61954800 -27549753 - AluY SINE Alu -8 303 1 265 289 138 58 chr17 61954816 61955041 -27549512 - L2 LINE L2 -244 3069 2827 265 240 190 51 chr17 61955145 61955293 -27549260 + L2 LINE L2 2895 3021 -251 2095 107 27 10 chr17 61955293 61955593 -27548960 - AluSx SINE Alu -7 305 1 265 240 190 51 chr17 61955593 61955615 -27548938 + L2 LINE L2 3021 3039 -233 342 0 0 0 chr17 61955615 61955653 -27548900 + (CA)n Simple_repeat Simple_repeat 2 39 0 189 0 0 0 chr17 61955652 61955673 -27548880 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 265 240 190 51 chr17 61955653 61955804 -27548749 + L2 LINE L2 3039 3272 0 * 724 314 83 45 chr17 61955795 61956328 -27548225 - L2 LINE L2 -548 2766 2198 2357 100 10 13 chr17 61956328 61956639 -27547914 + AluSg SINE Alu 1 310 0 724 314 83 45 chr17 61956639 61956802 -27547751 - L2 LINE L2 -1116 2198 2043 231 36 0 0 chr17 61957470 61957498 -27547055 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1752 197 0 0 chr17 61957952 61958246 -27546307 + AluJo SINE Alu 16 309 -3 1582 177 3 61 chr17 61958263 61958413 -27546140 + AluJo SINE Alu 1 125 -187 2002 133 0 20 chr17 61958413 61958715 -27545838 + AluJo SINE Alu 1 296 -16 1582 177 3 61 chr17 61958715 61958874 -27545679 + AluJo SINE Alu 125 292 -20 190 308 173 0 chr17 61959184 61959288 -27545265 - MIR SINE MIR -3 259 138 1951 185 38 45 chr17 61959461 61959641 -27544912 + MLT1C LTR MaLR 1 181 -286 1740 164 0 0 chr17 61959641 61959903 -27544650 + AluY SINE Alu 1 262 -49 2447 88 0 3 chr17 61959913 61960219 -27544334 + AluY SINE Alu 1 305 -6 1951 185 38 45 chr17 61960219 61960497 -27544056 + MLT1C LTR MaLR 190 467 0 483 331 6 22 chr17 61961485 61961663 -27542890 - MER91A DNA MER1_type 0 196 22 1848 172 0 29 chr17 61961887 61962195 -27542358 + AluJo SINE Alu 1 299 -13 765 275 81 53 chr17 61962222 61962618 -27541935 + L1ME3A LINE L1 5542 5948 -222 21 0 0 0 chr17 61962810 61962831 -27541722 + AT_rich Low_complexity Low_complexity 1 21 0 758 209 139 0 chr17 61962971 61963158 -27541395 + MIR SINE MIR 50 262 0 256 273 0 0 chr17 61963201 61963267 -27541286 - L2 LINE L2 -5 3308 3243 303 257 165 32 chr17 61963484 61963684 -27540869 - MLT1H LTR MaLR 0 595 300 508 205 153 21 chr17 61963725 61963921 -27540632 - MLT1H LTR MaLR -292 257 1 434 96 0 149 chr17 61964022 61964074 -27540479 - MADE1 DNA Mariner 0 80 46 2283 96 24 0 chr17 61964074 61964365 -27540188 + AluSx SINE Alu 1 298 -14 434 96 0 149 chr17 61964365 61964406 -27540147 - MADE1 DNA Mariner -34 46 1 183 129 0 0 chr17 61964455 61964486 -27540067 + (A)n Simple_repeat Simple_repeat 1 31 0 308 278 33 71 chr17 61964516 61964728 -27539825 + MIR SINE MIR 30 233 -29 554 280 63 37 chr17 61964928 61965199 -27539354 + L1ME LINE L1 5545 5822 -299 1152 146 0 0 chr17 61965334 61965498 -27539055 - AluJb SINE Alu -8 304 141 257 314 58 66 chr17 61965676 61965813 -27538740 - MER5B DNA MER1_type -41 137 2 309 219 211 0 chr17 61966492 61966606 -27537947 + MER103 DNA DNA 2 139 -27 417 317 26 29 chr17 61966804 61967145 -27537408 + L1M4 LINE L1 4228 4567 -1579 1668 160 29 52 chr17 61967189 61967496 -27537057 + AluSx SINE Alu 1 300 -12 2511 68 0 0 chr17 61967647 61967940 -27536613 + AluY SINE Alu 1 293 -18 2308 106 7 3 chr17 61967969 61968272 -27536281 - AluSq SINE Alu -9 304 1 367 255 75 9 chr17 61968509 61968615 -27535938 + MLT1K LTR MaLR 143 255 -333 322 259 169 12 chr17 61968629 61968795 -27535758 + MLT1K LTR MaLR 379 570 -18 252 174 0 72 chr17 61968733 61968802 -27535751 + LTR67 LTR ERVL 484 547 -10 * 1634 231 118 77 chr17 61968844 61969143 -27535410 - MLT2E LTR ERVL -1 627 342 1907 150 0 14 chr17 61969143 61969429 -27535124 + AluSx SINE Alu 1 282 -30 205 67 0 0 chr17 61969429 61969459 -27535094 + (CAAAA)n Simple_repeat Simple_repeat 3 145 0 1634 231 118 77 chr17 61969459 61969752 -27534801 - MLT2E LTR ERVL -286 342 10 301 197 45 114 chr17 61970181 61970313 -27534240 - AluJb SINE Alu 0 302 180 379 195 73 8 chr17 61970656 61970764 -27533789 + FRAM SINE Alu 71 138 -28 180 97 0 0 chr17 61970764 61970795 -27533758 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1972 110 18 0 chr17 61972083 61972356 -27532197 + AluSx SINE Alu 11 288 -24 348 64 0 0 chr17 61972358 61972405 -27532148 + (TG)n Simple_repeat Simple_repeat 2 48 0 2324 148 27 59 chr17 61972549 61972618 -27531935 - MSTC LTR MaLR -1 427 357 2216 113 0 0 chr17 61972618 61972927 -27531626 + AluSg SINE Alu 2 310 0 2324 148 27 59 chr17 61972927 61973296 -27531257 - MSTC LTR MaLR -71 357 3 1949 181 164 5 chr17 61973478 61973910 -27530643 + MLT1D LTR MaLR 5 505 0 719 171 187 20 chr17 61973952 61974051 -27530502 + MER33 DNA MER1_type 5 86 -2538 2077 119 3 0 chr17 61974051 61974353 -27530200 + AluSx SINE Alu 1 303 -9 719 171 187 20 chr17 61974353 61974509 -27530044 + MER33 DNA MER1_type 86 363 0 1676 155 37 0 chr17 61974550 61974847 -27529706 - AluJb SINE Alu 0 312 5 477 235 101 8 chr17 61975052 61975171 -27529382 - MER69A DNA AcHobo -47 130 1 4596 183 176 44 chr17 61975282 61976069 -27528484 + Zaphod DNA AcHobo 5 687 -3344 1859 123 3 35 chr17 61976069 61976385 -27528168 + AluSx SINE Alu 1 306 -6 1148 73 17 6 chr17 61976395 61976573 -27527980 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4596 183 176 44 chr17 61976573 61976646 -27527907 + Zaphod DNA AcHobo 694 756 -3275 1791 77 117 11 chr17 61976646 61976919 -27527634 - AluYa8 SINE Alu -8 302 1 4596 183 176 44 chr17 61976919 61977400 -27527153 + Zaphod DNA AcHobo 756 1172 -2859 1892 124 31 3 chr17 61977400 61977690 -27526863 + AluSx SINE Alu 1 298 -14 4596 183 176 44 chr17 61977690 61977867 -27526686 + Zaphod DNA AcHobo 1172 1738 -2293 2358 73 0 0 chr17 61977954 61978255 -27526298 + AluSx SINE Alu 1 301 -11 946 164 50 110 chr17 61978256 61978389 -27526164 + Zaphod DNA AcHobo 1970 2109 -1922 789 193 0 15 chr17 61978389 61978524 -27526029 + FLAM_C SINE Alu 1 133 0 946 164 50 110 chr17 61978524 61978708 -27525845 + Zaphod DNA AcHobo 2109 2268 -1763 831 227 128 25 chr17 61978741 61978983 -27525570 - MLT1K LTR MaLR -10 578 312 1693 121 0 0 chr17 61978989 61979249 -27525304 + AluSx SINE Alu 54 313 0 454 184 6 137 chr17 61979250 61979418 -27525135 - Zaphod DNA AcHobo -106 3925 3780 * 1302 179 35 92 chr17 61979412 61979678 -27524875 - Zaphod DNA AcHobo -1685 2346 2109 741 215 0 15 chr17 61979678 61979813 -27524740 - FLAM_C SINE Alu 0 133 1 1302 179 35 92 chr17 61979813 61979949 -27524604 - Zaphod DNA AcHobo -1922 2109 1967 418 236 47 19 chr17 61979962 61980068 -27524485 + MLT1I LTR MaLR 26 134 -275 1598 111 0 13 chr17 61980122 61980297 -27524256 - AluSp SINE Alu -5 308 135 2238 97 3 0 chr17 61980297 61980596 -27523957 - AluSg SINE Alu -10 300 1 1598 111 0 13 chr17 61980596 61980655 -27523898 - AluSp SINE Alu -178 135 77 792 215 41 37 chr17 61980703 61981036 -27523517 + LTR54 LTR ERV1 94 508 -2 1213 232 12 4 chr17 61981182 61981436 -27523117 + MIR SINE MIR 7 262 0 292 133 0 0 chr17 61981541 61981586 -27522967 + L1MA9 LINE L1 5602 5646 -645 641 162 10 0 chr17 61981586 61981685 -27522868 + MER2 DNA MER2_type 1 100 -245 867 201 0 0 chr17 61981685 61981844 -27522709 + AluJb SINE Alu 134 292 -20 691 113 0 0 chr17 61981847 61981944 -27522609 + MER2 DNA MER2_type 93 189 -156 1446 165 7 26 chr17 61981948 61982082 -27522471 - AluJb SINE Alu -45 267 139 1879 112 0 85 chr17 61982082 61982413 -27522140 - AluSx SINE Alu -7 305 3 1446 165 7 26 chr17 61982413 61982550 -27522003 - AluJb SINE Alu -173 139 1 1991 110 7 0 chr17 61982568 61982882 -27521671 - AluSp SINE Alu 0 316 1 266 167 0 0 chr17 61982882 61982924 -27521629 - Alu SINE Alu -259 42 1 665 196 88 0 chr17 61982924 61983072 -27521481 + MER2 DNA MER2_type 185 345 0 3144 140 49 52 chr17 61983072 61983374 -27521179 + L1MA9 LINE L1 5645 5946 -366 1692 189 13 0 chr17 61983374 61983681 -27520872 + AluJo SINE Alu 1 311 -1 3144 140 49 52 chr17 61983681 61984026 -27520527 + L1MA9 LINE L1 5946 6290 -22 2030 111 7 13 chr17 61984670 61984976 -27519577 - AluSx SINE Alu -4 308 5 372 127 0 0 chr17 61984985 61985040 -27519513 + L1MC1 LINE L1 5932 5986 -347 908 113 0 0 chr17 61985040 61985173 -27519380 + AluSg/x SINE Alu 168 300 -12 522 48 58 0 chr17 61985173 61985276 -27519277 + (TA)n Simple_repeat Simple_repeat 2 110 0 456 163 23 0 chr17 61985280 61985366 -27519187 - L1MC2 LINE L1 -425 5919 5832 2257 83 3 16 chr17 61985378 61985690 -27518863 - AluSg SINE Alu -2 308 1 808 163 0 65 chr17 61985805 61985854 -27518699 - L1MB4 LINE L1 0 6180 6129 1964 127 20 0 chr17 61985854 61986146 -27518407 - AluSx SINE Alu -14 298 1 808 163 0 65 chr17 61986146 61986280 -27518273 - L1MB4 LINE L1 -51 6129 6009 973 186 0 0 chr17 61986295 61986451 -27518102 - FRAM SINE Alu -10 156 1 347 251 72 62 chr17 61986896 61987091 -27517462 - L1ME3A LINE L1 -9 6161 5965 1948 128 23 7 chr17 61987185 61987491 -27517062 + AluSx SINE Alu 1 311 -1 198 330 106 21 chr17 61987739 61987833 -27516720 + L2 LINE L2 3151 3252 -20 188 328 16 0 chr17 61987847 61987908 -27516645 + MIR SINE MIR 189 250 -12 1787 220 88 52 chr17 61987948 61988471 -27516082 + MLT1F LTR MaLR 1 542 0 294 327 31 26 chr17 61988514 61988774 -27515779 + LTR16A LTR ERVL 1 248 -216 1499 177 46 0 chr17 61988900 61989020 -27515533 + AluJo SINE Alu 1 114 -198 351 0 0 0 chr17 61989020 61989059 -27515494 + (CA)n Simple_repeat Simple_repeat 2 40 0 1499 177 46 0 chr17 61989059 61989221 -27515332 + AluJo SINE Alu 114 296 -16 578 259 0 29 chr17 61989226 61989365 -27515188 + MIR SINE MIR 19 153 -109 2208 98 0 3 chr17 61989435 61989731 -27514822 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 61989967 61989995 -27514558 + (TG)n Simple_repeat Simple_repeat 2 29 0 1532 157 13 60 chr17 61989995 61990294 -27514259 - AluJo SINE Alu -27 285 1 337 298 247 29 chr17 61990503 61990778 -27513775 + L2 LINE L2 2376 2710 -604 434 334 84 39 chr17 61990946 61991278 -27513275 + L2 LINE L2 2949 3295 -18 514 188 0 0 chr17 61991287 61991367 -27513186 - Tigger7 DNA MER2_type 0 2487 2408 2412 55 6 13 chr17 61991450 61991762 -27512791 + AluSg SINE Alu 1 310 0 540 133 33 50 chr17 61993311 61993431 -27511122 - Tigger7 DNA MER2_type -71 2416 2299 * 1580 184 85 0 chr17 61993428 61993721 -27510832 - Tigger7 DNA MER2_type -2169 318 1 2270 90 0 0 chr17 61993758 61994057 -27510496 - AluSx SINE Alu -13 299 1 1653 166 7 0 chr17 61994078 61994367 -27510186 - AluJb SINE Alu -10 302 12 1783 177 3 3 chr17 61994408 61994718 -27509835 - AluJb SINE Alu -2 310 1 539 250 9 0 chr17 61995586 61995702 -27508851 - MER77 LTR ERV1 -1 604 488 585 65 32 49 chr17 61995732 61995855 -27508698 + (GGAA)n Simple_repeat Simple_repeat 4 124 0 1221 148 48 0 chr17 61995863 61995901 -27508652 + AluJb SINE Alu 84 119 -358 200 33 0 33 chr17 61995901 61995931 -27508622 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1221 148 48 0 chr17 61995931 61996276 -27508277 + AluJb SINE Alu 119 477 0 323 245 31 0 chr17 61996280 61996378 -27508175 - L1ME LINE L1 -333 5788 5688 1027 197 129 9 chr17 61996889 61997122 -27507431 + AluSg SINE Alu 5 265 -45 773 244 28 57 chr17 61997194 61997232 -27507321 - MIR SINE MIR -9 253 215 1899 148 45 28 chr17 61997232 61997590 -27506963 + THE1B LTR MaLR 1 364 0 773 244 28 57 chr17 61997590 61997804 -27506749 - MIR SINE MIR -47 215 13 319 248 211 9 chr17 61997903 61998012 -27506541 - L2 LINE L2 -4 3309 3179 1661 188 21 0 chr17 61998130 61998418 -27506135 + AluJo SINE Alu 3 296 -16 1135 163 46 25 chr17 61998510 61998750 -27505803 + ORSL DNA AcHobo 3 247 -28 449 339 76 40 chr17 61998763 61999288 -27505265 - L2 LINE L2 -469 2845 2302 1326 171 77 7 chr17 61999473 61999747 -27504806 + AluJo SINE Alu 1 293 -19 244 183 0 42 chr17 61999751 61999822 -27504731 + GA-rich Low_complexity Low_complexity 2 69 0 863 262 34 13 chr17 61999822 62000059 -27504494 + MIR SINE MIR 21 262 0 377 328 184 0 chr17 62000719 62000893 -27503660 - MIR SINE MIR -37 225 20 1595 172 10 39 chr17 62000916 62001224 -27503329 + AluJb SINE Alu 1 299 -13 784 301 38 5 chr17 62001308 62001521 -27503032 - MIR SINE MIR -40 222 3 1285 157 29 0 chr17 62003044 62003254 -27501299 + AluJo SINE Alu 85 300 -12 1705 156 35 0 chr17 62003270 62003558 -27500995 + AluJb SINE Alu 7 304 -8 1432 152 104 11 chr17 62004072 62004342 -27500211 - AluJb SINE Alu -17 295 1 1622 164 0 63 chr17 62004445 62004762 -27499791 - AluJo SINE Alu -15 297 1 21 0 0 0 chr17 62004870 62004891 -27499662 + AT_rich Low_complexity Low_complexity 1 21 0 774 138 9 0 chr17 62004891 62005007 -27499546 - FLAM_C SINE Alu -15 118 2 2340 69 3 10 chr17 62005522 62005828 -27498725 - AluSq SINE Alu -9 304 1 1161 192 200 64 chr17 62005920 62006310 -27498243 - MLT1J LTR MaLR 0 511 69 306 263 26 90 chr17 62006457 62006595 -27497958 + L1ME4a LINE L1 5598 5743 -378 1583 152 7 11 chr17 62006595 62006872 -27497681 + AluJb SINE Alu 35 310 -2 306 263 26 90 chr17 62006872 62006975 -27497578 + L1ME4a LINE L1 5743 5817 -304 1601 163 3 33 chr17 62006975 62007275 -27497278 + AluJo SINE Alu 1 291 -21 306 263 26 90 chr17 62007275 62007344 -27497209 + L1ME4a LINE L1 5817 5889 -232 22 35 0 0 chr17 62007440 62007469 -27497084 + AT_rich Low_complexity Low_complexity 1 29 0 1987 131 7 0 chr17 62007469 62007774 -27496779 + AluSq SINE Alu 2 308 -5 1670 173 10 26 chr17 62007966 62008279 -27496274 - AluJo SINE Alu -3 309 2 23 0 0 0 chr17 62008547 62008570 -27495983 + AT_rich Low_complexity Low_complexity 1 23 0 2039 114 27 0 chr17 62008660 62008957 -27495596 + AluSp SINE Alu 1 305 -8 698 168 15 15 chr17 62008971 62009102 -27495451 + FLAM_C SINE Alu 12 142 -1 882 163 31 10 chr17 62009102 62009288 -27495265 + MLT1A1 LTR MaLR 78 365 0 542 212 124 73 chr17 62009362 62009638 -27494915 - MER21B LTR ERV1 -50 813 504 1634 67 5 36 chr17 62009642 62009681 -27494872 - MSTA LTR MaLR -2 426 387 2103 64 0 0 chr17 62009681 62009945 -27494608 + AluY SINE Alu 39 302 -9 1634 67 5 36 chr17 62009945 62010128 -27494425 - MSTA LTR MaLR -41 387 211 1293 101 0 0 chr17 62010138 62010316 -27494237 + MER41B LTR ERV1 1 178 -457 12635 103 30 17 chr17 62010317 62011338 -27493215 + MER41B-int LTR ERV1 2199 3205 -2741 2087 117 0 31 chr17 62011338 62011655 -27492898 + AluSx SINE Alu 1 307 -5 12635 103 30 17 chr17 62011655 62013248 -27491305 + MER41B-int LTR ERV1 3205 5229 -717 1999 138 3 0 chr17 62013248 62013545 -27491008 + AluSx SINE Alu 4 301 -11 12635 103 30 17 chr17 62013545 62014273 -27490280 + MER41B-int LTR ERV1 5229 5946 0 3076 127 96 0 chr17 62014274 62014755 -27489798 + MER41B LTR ERV1 2 528 -107 1316 173 0 35 chr17 62014766 62015020 -27489533 - AluSx SINE Alu -67 245 1 482 158 0 0 chr17 62015020 62015096 -27489457 + MER41B LTR ERV1 560 635 0 1247 171 0 0 chr17 62015096 62015295 -27489258 - MSTA LTR MaLR -229 199 1 * 1705 216 52 96 chr17 62015295 62015816 -27488737 - MER21B LTR ERV1 -361 502 5 1560 189 93 47 chr17 62015914 62016296 -27488257 + MSTD LTR MaLR 1 432 0 1886 146 7 3 chr17 62016357 62016665 -27487888 + AluSx SINE Alu 1 309 -3 365 255 41 20 chr17 62016961 62017059 -27487494 - L2 LINE L2 0 3272 3173 782 126 0 9 chr17 62017070 62017228 -27487325 - LTR35 LTR ERV1 -401 217 1 283 154 128 39 chr17 62017232 62017310 -27487243 - LTR35-int LTR ERV1 -4 6672 6588 30 27 0 0 chr17 62017433 62017470 -27487083 + AT_rich Low_complexity Low_complexity 1 37 0 2252 55 0 0 chr17 62017525 62017800 -27486753 - AluY SINE Alu 0 311 37 323 161 56 140 chr17 62017884 62018027 -27486526 - LTR35-int LTR ERV1 -277 6054 5924 2253 150 115 29 chr17 62018057 62018109 -27486444 - LTR35-int LTR ERV1 -541 5790 5744 3146 81 69 0 chr17 62018109 62018544 -27486009 - MER4C LTR ERV1 0 465 1 2253 150 115 29 chr17 62018544 62018978 -27485575 - LTR35-int LTR ERV1 -587 5744 5262 1710 148 15 0 chr17 62018978 62019249 -27485304 + THE1-int LTR MaLR 985 1259 -321 730 252 7 0 chr17 62019249 62019404 -27485149 - MER41-int LTR ERV1 -3542 2404 2249 1270 188 31 4 chr17 62019405 62019634 -27484919 + MER41D LTR ERV1 1 235 -322 2354 62 0 13 chr17 62019634 62019941 -27484612 + AluY SINE Alu 1 303 -8 1014 117 0 7 chr17 62019959 62020104 -27484449 + AluSq/x SINE Alu 5 148 -164 2518 104 118 20 chr17 62020104 62020544 -27484009 - LTR21A LTR ERV1 -22 483 1 356 234 32 0 chr17 62020561 62020655 -27483898 - MER52A LTR ERV1 -1373 382 286 * 2996 104 123 24 chr17 62020612 62021158 -27483395 + MER52C LTR ERV1 679 1278 0 2622 82 119 7 chr17 62021218 62021621 -27482932 - LTR7 LTR ERV1 -2 448 1 1035 193 49 41 chr17 62022032 62022275 -27482278 - MER41-int LTR ERV1 -5286 660 416 1802 149 22 9 chr17 62022296 62022783 -27481770 - LTR35 LTR ERV1 0 618 1 248 335 40 64 chr17 62022830 62023003 -27481550 - L2 LINE L2 -188 3084 2916 1116 246 82 55 chr17 62023045 62023119 -27481434 + MLT1E LTR MaLR 98 169 -424 2407 64 0 0 chr17 62023119 62023415 -27481138 + AluY SINE Alu 1 296 -15 1116 246 82 55 chr17 62023415 62023791 -27480762 + MLT1E LTR MaLR 169 560 -33 707 177 0 61 chr17 62023794 62023941 -27480612 - FLAM_C SINE Alu -4 139 2 2281 93 0 3 chr17 62024609 62024919 -27479634 + AluSc SINE Alu 1 309 0 2711 7 0 0 chr17 62025192 62025492 -27479061 + AluYa5 SINE Alu 1 300 -11 1448 194 0 14 chr17 62025520 62025846 -27478707 + AluSq SINE Alu 1 322 0 1333 147 57 77 chr17 62026068 62026218 -27478335 + AluJo SINE Alu 1 145 -167 1910 131 3 0 chr17 62026218 62026543 -27478010 + AluSx SINE Alu 1 326 0 1333 147 57 77 chr17 62026543 62026691 -27477862 + AluJo SINE Alu 145 294 -18 1262 179 173 5 chr17 62026760 62027236 -27477317 - MLT2F LTR ERVL -62 601 1 831 186 16 52 chr17 62027236 62027430 -27477123 - ERVL-F LTR ERVL -8 5756 5570 1231 178 50 12 chr17 62027494 62027753 -27476800 + AluJo SINE Alu 33 301 -11 3930 227 71 16 chr17 62027779 62027830 -27476723 - ERVL-F LTR ERVL -276 5488 5441 1700 123 0 81 chr17 62027830 62028139 -27476414 + AluJb SINE Alu 9 292 -20 3930 227 71 16 chr17 62028139 62029524 -27475029 - ERVL-F LTR ERVL -323 5441 3901 1433 209 27 14 chr17 62029524 62029816 -27474737 - AluJb SINE Alu -16 296 1 3930 227 71 16 chr17 62029816 62030166 -27474387 - ERVL-F LTR ERVL -1863 3901 3571 509 245 58 22 chr17 62030251 62030390 -27474163 - ERVL LTR ERVL -5109 655 512 465 290 123 22 chr17 62030397 62030666 -27473887 - MER68 LTR ERV1 -30 532 237 21 0 0 0 chr17 62030719 62030740 -27473813 + AT_rich Low_complexity Low_complexity 1 21 0 2132 86 0 10 chr17 62030740 62031041 -27473512 - AluY SINE Alu -13 298 1 1308 168 131 8 chr17 62031063 62031331 -27473222 + AluJo SINE Alu 1 301 -11 1782 126 18 7 chr17 62031404 62031690 -27472863 - AluJo SINE Alu -15 297 9 913 269 86 21 chr17 62031776 62032252 -27472301 + L1ME4a LINE L1 5613 6119 -2 212 247 195 0 chr17 62033140 62033217 -27471336 + MIR3 SINE MIR 117 208 0 270 290 129 40 chr17 62033306 62033430 -27471123 + L3b LINE CR1 1215 1349 -234 867 147 61 6 chr17 62033495 62033658 -27470895 + Tigger4(Zombi) DNA MER2_type 1 172 -2559 3725 118 9 14 chr17 62033661 62034228 -27470325 + Tigger4(Zombi) DNA MER2_type 2168 2731 0 483 188 94 34 chr17 62034383 62034500 -27470053 - FLAM_A SINE Alu -8 125 2 1945 105 0 83 chr17 62034504 62034828 -27469725 - AluSx SINE Alu -15 297 1 213 300 167 38 chr17 62034884 62035147 -27469406 + L2 LINE L2 1802 2098 -1216 199 289 147 20 chr17 62035250 62035447 -27469106 + L2 LINE L2 2521 2742 -572 1829 153 0 31 chr17 62035839 62036023 -27468530 - AluJb SINE Alu -1 311 140 1810 146 31 0 chr17 62036023 62036311 -27468242 - AluSx SINE Alu -15 297 1 1829 153 0 31 chr17 62036311 62036447 -27468106 - AluJb SINE Alu -172 140 1 249 219 228 53 chr17 62036791 62036805 -27467748 + MER5A DNA MER1_type 5 38 -151 442 233 233 0 chr17 62036805 62036934 -27467619 - MER5A DNA MER1_type -2 187 29 894 157 0 0 chr17 62038572 62038742 -27465811 - AluJb SINE Alu 0 305 136 2300 90 3 0 chr17 62038743 62039044 -27465509 - AluSp SINE Alu -11 302 1 353 181 106 62 chr17 62039602 62039762 -27464791 - L1MC5 LINE L1 -30 7931 7765 1389 207 45 7 chr17 62039772 62040062 -27464491 - AluJo SINE Alu -11 301 1 272 290 29 0 chr17 62040064 62040133 -27464420 + MIR SINE MIR 94 164 -98 2247 78 3 0 chr17 62040419 62040713 -27463840 - AluSc SINE Alu -14 295 1 419 57 0 0 chr17 62040862 62040915 -27463638 - MADE1 DNA Mariner 0 80 28 329 203 0 0 chr17 62040931 62040990 -27463563 + FAM SINE Alu 121 179 0 251 86 0 0 chr17 62041089 62041124 -27463429 + MADE1 DNA Mariner 46 80 0 1365 222 55 0 chr17 62041308 62041619 -27462934 + L1MB7 LINE L1 5852 6179 -5 2050 129 3 0 chr17 62041926 62042237 -27462316 + AluSx SINE Alu 1 312 0 1949 122 41 0 chr17 62042240 62042535 -27462018 + AluSx SINE Alu 1 307 -5 22 0 0 0 chr17 62042850 62042872 -27461681 + AT_rich Low_complexity Low_complexity 1 22 0 668 178 0 0 chr17 62044588 62044689 -27459864 - AluJ/FLAM SINE Alu -210 102 2 523 256 23 0 chr17 62044862 62044991 -27459562 - MER58B DNA MER1_type 0 341 210 2249 71 0 17 chr17 62044998 62045319 -27459234 + AluSq SINE Alu 1 313 0 239 316 0 0 chr17 62045325 62045382 -27459171 - MER58B DNA MER1_type -284 57 1 861 197 53 5 chr17 62045392 62045580 -27458973 + MER3 DNA MER1_type 3 199 -10 225 355 108 11 chr17 62045619 62045712 -27458841 + L2 LINE L2 3203 3304 -9 1011 241 19 9 chr17 62045913 62046125 -27458428 + MIR SINE MIR 1 214 -48 555 206 135 35 chr17 62046596 62046766 -27457787 - L1ME2 LINE L1 -39 6125 5939 1018 132 169 11 chr17 62046793 62046982 -27457571 + MER20 DNA MER1_type 1 219 0 282 281 198 24 chr17 62047254 62047421 -27457132 + MIR SINE MIR 47 242 -20 902 184 6 11 chr17 62047674 62047848 -27456705 + AluJo SINE Alu 1 173 -139 1502 139 4 31 chr17 62047851 62048110 -27456443 + AluJb SINE Alu 42 293 -19 390 282 124 10 chr17 62048164 62048373 -27456180 + L1ME4a LINE L1 5877 6109 -12 22 35 0 0 chr17 62048374 62048403 -27456150 + AT_rich Low_complexity Low_complexity 1 29 0 719 142 0 9 chr17 62048675 62048788 -27455765 - FLAM_C SINE Alu -4 139 28 2050 105 25 0 chr17 62048791 62049077 -27455476 - AluSx SINE Alu -16 296 4 470 324 123 29 chr17 62049085 62049527 -27455026 - L1ME2 LINE L1 -297 5824 5314 1650 161 3 13 chr17 62049527 62049832 -27454721 - AluJo SINE Alu -2 310 9 470 324 123 29 chr17 62049832 62049870 -27454683 - L1ME2 LINE L1 -807 5314 5281 26 64 0 0 chr17 62050102 62050149 -27454404 + AT_rich Low_complexity Low_complexity 1 47 0 302 249 91 42 chr17 62050159 62050324 -27454229 - L1ME2 LINE L1 -1300 4846 4674 325 323 43 37 chr17 62051548 62051712 -27452841 - MIR3 SINE MIR -7 201 37 212 214 67 19 chr17 62051824 62051900 -27452653 - L2 LINE L2 -300 2974 2891 2371 77 0 0 chr17 62051900 62052211 -27452342 + AluY SINE Alu 1 311 0 212 214 67 19 chr17 62052211 62052222 -27452331 - L2 LINE L2 -383 2891 2882 2162 112 0 0 chr17 62052227 62052523 -27452030 + AluSg SINE Alu 1 296 -14 1858 132 0 21 chr17 62053616 62053928 -27450625 - AluJb SINE Alu 0 306 1 1929 119 6 35 chr17 62054527 62054839 -27449714 + AluSx SINE Alu 1 303 -9 311 301 20 44 chr17 62055109 62055312 -27449241 + L1ME4a LINE L1 5692 5889 -232 205 280 129 11 chr17 62056044 62056137 -27448416 - MIR SINE MIR -66 142 39 1924 129 0 29 chr17 62056903 62057212 -27447341 - AluSg SINE Alu -10 300 1 2242 70 3 0 chr17 62057932 62058217 -27446336 - AluSp SINE Alu -6 307 22 1772 170 0 0 chr17 62058332 62058626 -27445927 + AluJo SINE Alu 3 296 -16 29 70 0 0 chr17 62058795 62058852 -27445701 + AT_rich Low_complexity Low_complexity 1 57 0 640 217 8 0 chr17 62059458 62059587 -27444966 + FLAM_A SINE Alu 1 130 -3 262 235 176 10 chr17 62059861 62059963 -27444590 - MIR SINE MIR -112 150 32 186 43 0 0 chr17 62060522 62060545 -27444008 + (CAG)n Simple_repeat Simple_repeat 1 23 0 22 70 0 0 chr17 62060652 62060695 -27443858 + GC_rich Low_complexity Low_complexity 1 43 0 270 73 0 0 chr17 62061335 62061376 -27443177 + (TG)n Simple_repeat Simple_repeat 2 42 0 886 133 7 7 chr17 62061745 62061888 -27442665 + AluJo SINE Alu 88 230 -82 1929 121 4 7 chr17 62062083 62062363 -27442190 + AluSx SINE Alu 5 283 -29 764 176 8 0 chr17 62062524 62062649 -27441904 + FLAM_C SINE Alu 6 131 -12 213 208 0 19 chr17 62062664 62062717 -27441836 + (TGGA)n Simple_repeat Simple_repeat 3 54 0 3296 138 83 51 chr17 62063119 62063820 -27440733 - LTR8A LTR ERV1 0 727 5 1912 98 76 0 chr17 62063931 62064208 -27440345 + AluSx SINE Alu 1 298 -14 243 224 30 0 chr17 62064401 62064468 -27440085 - MLT1B LTR MaLR -142 248 180 633 242 54 0 chr17 62064478 62064627 -27439926 + MER41C LTR ERV1 1 157 -397 * 3573 104 5 61 chr17 62064618 62065176 -27439377 + LTR8 LTR ERV1 165 691 0 809 237 9 83 chr17 62065245 62065570 -27438983 + L1M4 LINE L1 3722 4022 -2124 4939 82 22 1 chr17 62065594 62066241 -27438312 - PABL_A LTR ERV1 0 660 1 12594 59 67 35 chr17 62066241 62066872 -27437681 - PABL_A-int LTR ERV1 0 5015 4406 1972 141 0 0 chr17 62066872 62067171 -27437382 - AluSc SINE Alu -10 299 1 12594 59 67 35 chr17 62067171 62067802 -27436751 - PABL_A-int LTR ERV1 -609 4406 3797 1983 120 7 10 chr17 62067802 62068103 -27436450 + AluSx SINE Alu 1 300 -12 12594 59 67 35 chr17 62068103 62068631 -27435922 - PABL_A-int LTR ERV1 -1218 3797 3166 1428 90 0 0 chr17 62068631 62068820 -27435733 + AluY SINE Alu 112 300 -11 5634 75 5 8 chr17 62068821 62069595 -27434958 - PABL_A-int LTR ERV1 -1849 3166 2395 730 19 39 19 chr17 62069572 62069676 -27434877 - PABL_A-int LTR ERV1 -2864 2151 2046 * 360 0 0 0 chr17 62069677 62069717 -27434836 + (TA)n Simple_repeat Simple_repeat 2 41 0 1063 90 0 0 chr17 62069720 62069865 -27434688 - AluY SINE Alu 0 311 167 1271 43 27 5 chr17 62069865 62070050 -27434503 - PABL_A-int LTR ERV1 -2965 2050 1862 871 138 252 52 chr17 62070050 62070079 -27434474 + LTR8 LTR ERV1 1 23 -668 688 36 0 0 chr17 62070079 62070163 -27434390 + L1PA2 LINE L1 6066 6149 -6 871 138 252 52 chr17 62070163 62070343 -27434210 + LTR8 LTR ERV1 23 252 -439 3903 56 2 0 chr17 62070344 62070847 -27433706 - PABL_A-int LTR ERV1 -3362 1653 1150 * 6152 90 36 27 chr17 62070840 62071011 -27433542 - PABL_A-int LTR ERV1 -4120 895 727 2028 116 41 3 chr17 62071011 62071304 -27433249 + AluY SINE Alu 1 304 -7 6152 90 36 27 chr17 62071304 62071426 -27433127 - PABL_A-int LTR ERV1 -4288 727 608 2259 114 0 7 chr17 62071426 62071733 -27432820 - AluSg SINE Alu -5 305 1 6152 90 36 27 chr17 62071733 62072325 -27432228 - PABL_A-int LTR ERV1 -4407 608 1 3096 55 3 5 chr17 62072325 62072705 -27431848 - PABL_A LTR ERV1 0 660 282 1879 185 84 36 chr17 62072722 62073160 -27431393 + LTR2B LTR ERV1 32 490 0 1975 75 0 0 chr17 62073160 62073414 -27431139 + Harlequin LTR ERV1 1 254 -6642 836 257 19 15 chr17 62073414 62073679 -27430874 + L1MC/D LINE L1 4424 4689 -1457 1194 80 0 7 chr17 62073696 62073846 -27430707 + AluSx SINE Alu 10 158 -154 877 235 115 0 chr17 62073846 62074046 -27430507 + AluJo SINE Alu 73 295 -17 1056 136 32 0 chr17 62074047 62074201 -27430352 + AluSx SINE Alu 1 159 -153 1471 129 0 0 chr17 62074202 62074412 -27430141 + AluSg/x SINE Alu 101 310 0 787 228 11 11 chr17 62074412 62074601 -27429952 + L1MC/D LINE L1 4764 4952 -1194 766 199 20 14 chr17 62074629 62074775 -27429778 + AluJo SINE Alu 127 273 -39 1697 105 0 4 chr17 62074783 62075012 -27429541 + AluSq SINE Alu 1 228 -85 967 176 135 43 chr17 62075012 62075152 -27429401 + L1MC/D LINE L1 5124 5250 -992 3116 70 16 0 chr17 62075152 62075523 -27429030 - MER51B LTR ERV1 0 377 1 967 176 135 43 chr17 62075523 62075682 -27428871 + L1MC/D LINE L1 5250 5448 -794 1713 182 7 10 chr17 62075682 62075990 -27428563 + AluJb SINE Alu 1 307 -5 967 176 135 43 chr17 62075990 62076069 -27428484 + L1MC/D LINE L1 5448 5518 -724 239 88 0 0 chr17 62076069 62076103 -27428450 - Alu SINE Alu -268 34 1 1059 163 4 83 chr17 62076103 62076343 -27428210 + MER41B LTR ERV1 322 542 -93 1519 159 89 0 chr17 62076344 62076614 -27427939 + AluSx SINE Alu 1 294 -18 298 219 38 150 chr17 62076670 62076719 -27427834 + MIR SINE MIR 60 113 -149 2141 136 0 0 chr17 62076719 62077014 -27427539 - AluSx SINE Alu -17 295 1 298 219 38 150 chr17 62077014 62077124 -27427429 + MIR SINE MIR 113 201 -61 749 224 128 22 chr17 62077124 62077437 -27427116 + Charlie2 DNA MER1_type 2517 2862 0 218 207 17 17 chr17 62078056 62078114 -27426439 + G-rich Low_complexity Low_complexity 5 62 0 2358 101 0 0 chr17 62078195 62078503 -27426050 - AluSx SINE Alu -4 308 1 2097 80 17 43 chr17 62078510 62078811 -27425742 - AluSx SINE Alu -19 293 1 1786 142 17 24 chr17 62079381 62079677 -27424876 - AluJo SINE Alu -13 299 6 793 164 8 0 chr17 62080954 62081082 -27423471 - MLT1B LTR MaLR 0 390 262 46 0 0 46 chr17 62081082 62081107 -27423446 + AT_rich Low_complexity Low_complexity 1 26 -36 2253 104 0 7 chr17 62081107 62081406 -27423147 - AluSx SINE Alu -14 298 2 46 0 0 46 chr17 62081406 62081445 -27423108 + AT_rich Low_complexity Low_complexity 26 62 0 337 93 0 0 chr17 62081445 62081488 -27423065 - MER57B LTR ERV1 -66 368 326 1700 121 87 0 chr17 62081492 62081757 -27422796 - AluJo SINE Alu -24 288 1 1719 167 3 11 chr17 62081851 62082167 -27422386 + AluJb SINE Alu 1 314 0 1545 173 3 58 chr17 62082189 62082501 -27422052 + AluJo SINE Alu 1 295 -17 301 305 90 12 chr17 62082802 62082969 -27421584 - L1MC/D LINE L1 -2084 5724 5545 278 244 165 47 chr17 62083082 62083209 -27421344 - MIR SINE MIR -79 183 42 2009 116 10 7 chr17 62083381 62083674 -27420879 + AluSx SINE Alu 1 294 -18 756 186 24 0 chr17 62083926 62084050 -27420503 - FLAM_A SINE Alu -2 131 5 2320 86 0 10 chr17 62084166 62084467 -27420086 - AluSc SINE Alu -11 298 1 1332 149 36 44 chr17 62085199 62085313 -27419240 - AluJo SINE Alu -65 247 134 2628 56 0 0 chr17 62085313 62085615 -27418938 - AluY SINE Alu -9 302 1 1332 149 36 44 chr17 62085615 62085749 -27418804 - AluJo SINE Alu -178 134 1 1186 190 95 52 chr17 62085898 62085928 -27418625 - MLT2B1 LTR ERVL -10 404 377 234 116 0 0 chr17 62085928 62085971 -27418582 + (CA)n Simple_repeat Simple_repeat 2 44 0 1186 190 95 52 chr17 62085971 62086300 -27418253 - MLT2B1 LTR ERVL -37 377 60 1972 149 0 31 chr17 62086636 62086958 -27417595 + AluSx SINE Alu 1 312 0 330 179 15 0 chr17 62087104 62087171 -27417382 - MLT2B1 LTR ERVL -447 68 1 362 318 155 5 chr17 62087341 62087545 -27417008 + MIR SINE MIR 17 249 -13 26 30 0 0 chr17 62089587 62089620 -27414933 + AT_rich Low_complexity Low_complexity 1 33 0 852 150 0 23 chr17 62089620 62089753 -27414800 - FLAM_C SINE Alu -13 130 1 2410 78 0 16 chr17 62090306 62090612 -27413941 + AluY SINE Alu 1 301 -10 444 273 83 0 chr17 62090729 62090850 -27413703 + MER94 DNA DNA 4 134 0 2045 133 14 0 chr17 62090974 62091260 -27413293 + AluSx SINE Alu 1 290 -22 240 302 0 0 chr17 62091402 62091465 -27413088 + MARNA DNA Mariner 246 308 -278 513 178 0 0 chr17 62092098 62092199 -27412354 - L1MB2 LINE L1 -1 6170 6070 2160 115 0 0 chr17 62092729 62093017 -27411536 + AluSx SINE Alu 1 288 -24 1966 156 10 0 chr17 62093393 62093688 -27410865 - AluSx SINE Alu -14 298 1 278 50 25 0 chr17 62093688 62093728 -27410825 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2196 92 7 0 chr17 62093728 62094009 -27410544 - AluY SINE Alu -28 283 1 2447 65 3 0 chr17 62094140 62094434 -27410119 - AluY SINE Alu -16 295 1 1546 169 19 4 chr17 62094615 62094881 -27409672 + AluJb SINE Alu 37 306 -6 4713 154 106 46 chr17 62094915 62095928 -27408625 + Tigger6a DNA MER2_type 7 1079 -4 2235 120 0 0 chr17 62095929 62096221 -27408332 + AluSx SINE Alu 1 292 -20 534 234 88 6 chr17 62096985 62097156 -27407397 - L1ME3A LINE L1 -10 6160 5976 1969 122 10 40 chr17 62097165 62097468 -27407085 - AluSx SINE Alu -18 294 1 2409 72 0 10 chr17 62097586 62097892 -27406661 - AluY SINE Alu -8 303 1 1776 133 7 36 chr17 62098334 62098636 -27405917 + AluJb SINE Alu 1 293 -19 234 0 0 0 chr17 62098975 62099001 -27405552 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1922 119 37 0 chr17 62099008 62099277 -27405276 - AluSx SINE Alu -33 279 1 819 105 7 85 chr17 62099279 62099432 -27405121 - FLAM_C SINE Alu -2 141 1 370 186 58 12 chr17 62101018 62101104 -27403449 - MER112 DNA MER1_type -42 218 129 2266 80 0 17 chr17 62101115 62101414 -27403139 - AluSx SINE Alu -18 294 1 1009 184 31 103 chr17 62101899 62102220 -27402333 - LTR41 LTR ERVL -3 770 473 2596 156 139 80 chr17 62102223 62102500 -27402053 - Charlie1a DNA MER1_type -1975 786 527 1596 98 0 9 chr17 62102500 62102714 -27401839 + AluSg/x SINE Alu 82 293 -19 2596 156 139 80 chr17 62102714 62103178 -27401375 - Charlie1a DNA MER1_type -2234 527 1 1961 147 0 0 chr17 62103500 62103786 -27400767 - AluSx SINE Alu -26 286 1 182 304 134 0 chr17 62104102 62104214 -27400339 - MIR3 SINE MIR -11 197 71 * 525 284 138 5 chr17 62104209 62104427 -27400126 + MIR SINE MIR 13 259 -3 2052 116 10 13 chr17 62104779 62105080 -27399473 + AluSx SINE Alu 1 300 -12 496 66 0 0 chr17 62105357 62105418 -27399135 + AluSc SINE Alu 231 291 -18 1721 157 17 14 chr17 62105444 62105738 -27398815 + AluJo SINE Alu 5 299 -13 854 207 103 0 chr17 62106043 62106246 -27398307 - MIR SINE MIR -29 233 10 942 162 19 7 chr17 62106349 62106503 -27398050 + AluJb SINE Alu 140 295 -17 1940 133 58 0 chr17 62106611 62106889 -27397664 - AluSx SINE Alu -18 294 1 14747 108 123 85 chr17 62106895 62109467 -27395086 - MER4A-int LTR ERV1 -304 6240 3767 2331 81 0 7 chr17 62109467 62109764 -27394789 - AluSq SINE Alu -18 295 1 14747 108 123 85 chr17 62109764 62110443 -27394110 - MER4A-int LTR ERV1 -2777 3767 3115 2438 74 0 0 chr17 62110443 62110742 -27393811 - AluY SINE Alu -12 299 1 14747 108 123 85 chr17 62110742 62110788 -27393765 - MER4A-int LTR ERV1 -3429 3115 3072 2423 81 0 0 chr17 62110788 62111084 -27393469 + AluY SINE Alu 1 296 -15 14747 108 123 85 chr17 62111084 62112239 -27392314 - MER4A-int LTR ERV1 -3472 3072 682 277 114 0 45 chr17 62112260 62112304 -27392249 - LTR49 LTR ERV1 -283 312 271 279 109 109 78 chr17 62112304 62112368 -27392185 - MER4A-int LTR ERV1 -5846 752 687 3001 70 72 12 chr17 62112387 62112803 -27391750 - MER4A-int LTR ERV1 -6157 441 1 1644 169 6 42 chr17 62112806 62112855 -27391698 - MER4A LTR ERV1 0 664 615 2726 39 0 0 chr17 62112855 62113166 -27391387 + AluY SINE Alu 1 311 0 1644 169 6 42 chr17 62113166 62113469 -27391084 - MER4A LTR ERV1 -49 615 266 658 59 20 49 chr17 62113471 62113573 -27390980 - MER4A LTR ERV1 -565 99 1 1058 96 48 75 chr17 62113573 62113749 -27390804 - L1MC/D LINE L1 -743 5403 5285 1165 139 0 6 chr17 62113749 62113914 -27390639 - FRAM SINE Alu -2 164 1 1058 96 48 75 chr17 62113914 62113965 -27390588 - L1MC/D LINE L1 -861 5285 5234 2228 238 26 6 chr17 62113965 62114649 -27389904 - MER83B-int LTR ERV1 -1146 3734 1000 424 207 0 0 chr17 62114649 62114731 -27389822 - L1MC/D LINE L1 -880 5266 5185 2284 114 0 0 chr17 62114791 62115089 -27389464 + AluSx SINE Alu 1 298 -14 2432 84 0 0 chr17 62115091 62115387 -27389166 + AluSc SINE Alu 1 296 -13 1922 168 3 0 chr17 62115508 62115811 -27388742 + AluJo SINE Alu 1 304 -8 516 174 0 12 chr17 62115990 62116076 -27388477 - FLAM SINE Alu -16 127 43 298 234 0 39 chr17 62116092 62116169 -27388384 + L1MEc LINE L1 2017 2090 -4306 * 8075 193 34 78 chr17 62116156 62116730 -27387823 + L1MEc LINE L1 2890 3488 -2727 2246 108 7 3 chr17 62116730 62117035 -27387518 + AluSg1 SINE Alu 1 306 -3 8075 193 34 78 chr17 62117035 62118142 -27386411 + L1MEc LINE L1 3488 4642 -1573 2075 122 3 31 chr17 62118142 62118461 -27386092 + AluSp SINE Alu 1 310 -3 8075 193 34 78 chr17 62118461 62119105 -27385448 + L1MEc LINE L1 4642 5116 -1099 1887 139 66 0 chr17 62119105 62119392 -27385161 + AluJo SINE Alu 1 306 -6 4123 164 38 33 chr17 62119392 62120230 -27384323 + L1MB7 LINE L1 5325 6166 -18 230 209 0 15 chr17 62120352 62120419 -27384134 + L1M4 LINE L1 3385 3450 -2696 348 280 0 0 chr17 62120453 62120553 -27384000 + L1M4 LINE L1 3437 3536 -2610 329 94 0 38 chr17 62120577 62120630 -27383923 - MER4B LTR ERV1 -61 549 499 254 157 20 0 chr17 62120644 62120695 -27383858 + HAL1 LINE L1 1113 1164 -1343 1171 228 78 12 chr17 62120722 62121056 -27383497 + L1M4 LINE L1 3543 3898 -2248 2328 79 7 7 chr17 62121786 62122076 -27382477 + AluSx SINE Alu 7 296 -16 576 0 0 0 chr17 62122095 62122159 -27382394 + (TTCC)n Simple_repeat Simple_repeat 4 67 0 1958 126 7 31 chr17 62122166 62122460 -27382093 - AluSx SINE Alu -25 287 1 240 216 68 14 chr17 62122460 62122534 -27382019 - MIR SINE MIR -60 202 125 232 245 0 0 chr17 62122957 62123006 -27381547 + MIR SINE MIR 90 138 -124 1004 182 0 28 chr17 62123116 62123292 -27381261 + AluJo SINE Alu 11 181 -131 274 77 77 0 chr17 62123328 62123380 -27381173 + A-rich Low_complexity Low_complexity 4 59 0 285 155 0 0 chr17 62123922 62123980 -27380573 + GA-rich Low_complexity Low_complexity 2 59 0 1717 123 30 53 chr17 62125575 62125877 -27378676 - AluJb SINE Alu -13 299 5 283 364 68 11 chr17 62125933 62126109 -27378444 - MIR SINE MIR -57 205 20 266 267 48 9 chr17 62126332 62126437 -27378116 + MIR3 SINE MIR 78 186 -22 803 145 15 0 chr17 62126679 62126810 -27377743 - FLAM_A SINE Alu 0 133 1 1666 197 3 16 chr17 62126822 62127127 -27377426 - AluJo SINE Alu -11 301 1 2420 78 3 0 chr17 62127139 62127434 -27377119 - AluSg SINE Alu -14 296 1 1894 161 7 13 chr17 62127446 62127750 -27376803 - AluJo SINE Alu -10 302 1 878 197 52 10 chr17 62128627 62128820 -27375733 + MIR SINE MIR 56 256 -6 2278 123 0 0 chr17 62129032 62129332 -27375221 - AluJb SINE Alu -12 300 1 195 259 86 0 chr17 62129688 62129769 -27374784 + MIR SINE MIR 81 168 -94 * 331 293 57 21 chr17 62129768 62129908 -27374645 - MIR SINE MIR 0 262 118 1224 228 169 18 chr17 62130608 62131047 -27373506 - MLT1D LTR MaLR 0 505 1 327 300 73 13 chr17 62131256 62131406 -27373147 + MIR SINE MIR 48 206 -56 742 309 69 49 chr17 62131412 62131904 -27372649 - MLT1J LTR MaLR 0 511 10 2257 121 0 3 chr17 62131940 62132237 -27372316 + AluSq SINE Alu 1 296 -17 874 177 98 17 chr17 62132326 62132629 -27371924 - MSTD LTR MaLR 0 396 1 1065 213 83 10 chr17 62132676 62132746 -27371807 - MER33 DNA MER1_type -2261 324 261 1416 177 51 63 chr17 62132746 62133062 -27371491 - AluJo SINE Alu 0 312 1 1065 213 83 10 chr17 62133062 62133292 -27371261 - MER33 DNA MER1_type -2324 261 2 1679 93 0 5 chr17 62133342 62133585 -27370968 - AluSc SINE Alu 0 311 70 798 293 109 32 chr17 62133654 62134201 -27370352 - L1ME3A LINE L1 -215 5947 5479 2383 195 100 12 chr17 62134611 62135211 -27369342 - MLT1E1 LTR MaLR 0 654 2 2103 157 44 49 chr17 62135261 62135311 -27369242 - MSTB LTR MaLR 0 426 377 2299 107 10 0 chr17 62135311 62135619 -27368934 - AluSq SINE Alu -2 311 1 2103 157 44 49 chr17 62135619 62135996 -27368557 - MSTB LTR MaLR -49 377 1 189 241 111 19 chr17 62136378 62136432 -27368121 + L2 LINE L2 3249 3307 -6 331 261 204 14 chr17 62136837 62136979 -27367574 + MIR3 SINE MIR 16 184 -24 569 305 116 56 chr17 62137660 62138338 -27366215 + L2 LINE L2 2445 3184 -88 1653 169 26 55 chr17 62138338 62138511 -27366042 - AluJo SINE Alu -13 299 137 2260 119 0 0 chr17 62138511 62138806 -27365747 - AluSx SINE Alu -17 295 1 1653 169 26 55 chr17 62138806 62138940 -27365613 - AluJo SINE Alu -175 137 1 569 305 116 56 chr17 62138940 62139000 -27365553 + L2 LINE L2 3184 3239 -33 189 305 53 21 chr17 62139202 62139297 -27365256 - MIR SINE MIR -58 204 107 472 216 111 33 chr17 62140065 62140246 -27364307 - MER106A DNA MER1_type -39 197 3 701 181 5 98 chr17 62141500 62141617 -27362936 - MER5A DNA MER1_type -13 176 82 1815 168 0 27 chr17 62141617 62141915 -27362638 - AluJo SINE Alu -22 290 1 701 181 5 98 chr17 62141915 62141990 -27362563 - MER5A DNA MER1_type -107 82 2 1747 153 3 57 chr17 62142054 62142368 -27362185 - AluJb SINE Alu -15 297 1 769 213 36 62 chr17 62142426 62142651 -27361902 - L1ME2 LINE L1 -9 6155 5937 2442 97 0 3 chr17 62144189 62144497 -27360056 + AluSx SINE Alu 1 307 -5 451 193 26 26 chr17 62144642 62144756 -27359797 + MER5B DNA MER1_type 3 116 -62 293 345 129 0 chr17 62144802 62144996 -27359557 + L2 LINE L2 1839 2057 -1257 181 325 38 12 chr17 62145435 62145515 -27359038 - MIR SINE MIR -55 153 72 427 340 60 49 chr17 62145563 62146010 -27358543 + L2 LINE L2 2821 3272 0 741 216 3 3 chr17 62146037 62146387 -27358166 + (TGGA)n Simple_repeat Simple_repeat 1 350 0 288 233 42 106 chr17 62150050 62150239 -27354314 + L1MC5 LINE L1 7755 7931 -30 1013 287 77 63 chr17 62150357 62151034 -27353519 + MER21B LTR ERV1 24 709 -154 205 182 0 0 chr17 62151394 62151427 -27353126 + (TG)n Simple_repeat Simple_repeat 1 33 0 2203 119 20 0 chr17 62152402 62152704 -27351849 - AluSx SINE Alu -4 308 1 213 333 46 9 chr17 62152736 62152844 -27351709 + L3 LINE CR1 1360 1471 -106 380 282 80 58 chr17 62152896 62152919 -27351634 - HAL1b LINE L1 0 1348 1327 2169 130 13 21 chr17 62152919 62153297 -27351256 + THE1C LTR MaLR 1 375 0 380 282 80 58 chr17 62153297 62153461 -27351092 - HAL1b LINE L1 -21 1327 1157 293 228 290 25 chr17 62154809 62154971 -27349582 + MIR SINE MIR 57 261 -1 238 184 0 20 chr17 62155111 62155160 -27349393 - MLT1G1 LTR MaLR -544 51 4 2409 86 0 7 chr17 62155194 62155497 -27349056 - AluSc SINE Alu -8 301 1 480 191 27 18 chr17 62156077 62156187 -27348366 + FLAM_A SINE Alu 20 130 -12 1645 110 51 8 chr17 62156207 62156444 -27348109 - AluSq SINE Alu -9 304 58 5814 123 65 13 chr17 62156544 62157651 -27346902 - MER4A-int LTR ERV1 -4441 2157 993 270 114 0 45 chr17 62157672 62157716 -27346837 - LTR49 LTR ERV1 -283 312 271 257 141 62 31 chr17 62157716 62157780 -27346773 - MER4A-int LTR ERV1 -5846 752 687 2855 70 72 12 chr17 62157799 62158215 -27346338 - MER4A-int LTR ERV1 -6157 441 1 1568 166 6 50 chr17 62158218 62158267 -27346286 - MER4A LTR ERV1 0 664 614 2781 36 0 0 chr17 62158267 62158576 -27345977 + AluY SINE Alu 1 309 -2 1568 166 6 50 chr17 62158576 62158885 -27345668 - MER4A LTR ERV1 -50 614 263 612 69 20 50 chr17 62158885 62158986 -27345567 - MER4A LTR ERV1 -566 98 1 972 100 48 75 chr17 62158986 62159162 -27345391 - L1MC/D LINE L1 -743 5403 5285 1056 139 0 6 chr17 62159162 62159327 -27345226 - FRAM SINE Alu -2 164 1 972 100 48 75 chr17 62159327 62159378 -27345175 - L1MC/D LINE L1 -861 5285 5234 2196 238 26 6 chr17 62159378 62160062 -27344491 - MER83B-int LTR ERV1 -1146 3734 1000 402 207 0 0 chr17 62160062 62160144 -27344409 - L1MC/D LINE L1 -880 5266 5185 2333 114 0 0 chr17 62160204 62160502 -27344051 + AluSx SINE Alu 1 298 -14 2395 86 0 3 chr17 62160504 62160796 -27343757 + AluSc SINE Alu 1 291 -18 894 178 101 13 chr17 62160885 62161186 -27343367 - MSTD LTR MaLR 0 396 1 1065 213 83 10 chr17 62161233 62161303 -27343250 - MER33 DNA MER1_type -2261 324 261 1406 180 51 63 chr17 62161303 62161619 -27342934 - AluJo SINE Alu 0 312 1 1065 213 83 10 chr17 62161619 62161849 -27342704 - MER33 DNA MER1_type -2324 261 2 1679 93 0 5 chr17 62161899 62162142 -27342411 - AluSc SINE Alu 0 311 70 798 293 109 32 chr17 62162211 62162758 -27341795 - L1ME3A LINE L1 -215 5947 5479 2383 195 100 12 chr17 62163168 62163768 -27340785 - MLT1E1 LTR MaLR 0 654 2 2103 157 44 49 chr17 62163818 62163868 -27340685 - MSTB LTR MaLR 0 426 377 2299 107 10 0 chr17 62163868 62164176 -27340377 - AluSq SINE Alu -2 311 1 2103 157 44 49 chr17 62164176 62164553 -27340000 - MSTB LTR MaLR -49 377 1 189 241 111 19 chr17 62164935 62164989 -27339564 + L2 LINE L2 3249 3307 -6 316 268 204 14 chr17 62165394 62165536 -27339017 + MIR3 SINE MIR 16 184 -24 579 304 116 56 chr17 62166217 62166895 -27337658 + L2 LINE L2 2445 3184 -88 1653 169 26 55 chr17 62166895 62167068 -27337485 - AluJo SINE Alu -13 299 137 2260 119 0 0 chr17 62167068 62167363 -27337190 - AluSx SINE Alu -17 295 1 1653 169 26 55 chr17 62167363 62167497 -27337056 - AluJo SINE Alu -175 137 1 579 304 116 56 chr17 62167497 62167557 -27336996 + L2 LINE L2 3184 3239 -33 189 305 53 21 chr17 62167759 62167854 -27336699 - MIR SINE MIR -58 204 107 472 216 111 33 chr17 62168622 62168803 -27335750 - MER106A DNA MER1_type -39 197 3 701 181 5 98 chr17 62170057 62170174 -27334379 - MER5A DNA MER1_type -13 176 82 1815 168 0 27 chr17 62170174 62170472 -27334081 - AluJo SINE Alu -22 290 1 701 181 5 98 chr17 62170472 62170547 -27334006 - MER5A DNA MER1_type -107 82 2 1747 153 3 57 chr17 62170611 62170925 -27333628 - AluJb SINE Alu -15 297 1 769 213 36 62 chr17 62170982 62171207 -27333346 - L1ME2 LINE L1 -9 6155 5937 2442 97 0 3 chr17 62172745 62173053 -27331500 + AluSx SINE Alu 1 307 -5 185 295 95 32 chr17 62173057 62173152 -27331401 + MER5A DNA MER1_type 61 161 -28 282 246 218 7 chr17 62173198 62173340 -27331213 - MER5B DNA MER1_type -2 176 5 272 350 129 0 chr17 62173358 62173552 -27331001 + L2 LINE L2 1839 2057 -1257 187 325 38 12 chr17 62173991 62174071 -27330482 - MIR SINE MIR -55 153 72 461 338 60 49 chr17 62174119 62174566 -27329987 + L2 LINE L2 2821 3272 0 741 216 3 3 chr17 62174593 62174943 -27329610 + (TGGA)n Simple_repeat Simple_repeat 1 350 0 184 271 82 71 chr17 62177827 62177912 -27326641 - MIR3 SINE MIR -4 204 119 299 233 42 106 chr17 62178606 62178795 -27325758 + L1MC5 LINE L1 7755 7931 -30 1022 256 94 81 chr17 62178914 62179591 -27324962 + MER21B LTR ERV1 24 709 -154 205 182 0 0 chr17 62179951 62179984 -27324569 + (TG)n Simple_repeat Simple_repeat 1 33 0 2016 116 23 0 chr17 62180959 62181260 -27323293 - AluSx SINE Alu -4 308 1 231 333 46 9 chr17 62181292 62181400 -27323153 + L3 LINE CR1 1360 1471 -106 231 222 111 71 chr17 62181452 62181475 -27323078 - HAL1b LINE L1 0 1348 1327 2284 130 13 21 chr17 62181475 62181853 -27322700 + THE1C LTR MaLR 1 375 0 231 222 111 71 chr17 62181853 62181928 -27322625 - HAL1b LINE L1 -21 1327 1246 330 228 290 25 chr17 62183365 62183527 -27321026 + MIR SINE MIR 57 261 -1 249 184 0 20 chr17 62183667 62183716 -27320837 - MLT1G1 LTR MaLR -544 51 4 2261 83 0 7 chr17 62183750 62184052 -27320501 - AluSc SINE Alu -9 300 1 506 191 27 18 chr17 62184631 62184741 -27319812 + FLAM_A SINE Alu 20 130 -12 1888 122 41 7 chr17 62184761 62185055 -27319498 - AluSq SINE Alu -9 304 1 1851 129 9 55 chr17 62185507 62185833 -27318720 + AluSq SINE Alu 1 311 -2 311 243 40 0 chr17 62185872 62185946 -27318607 - L1MCa LINE L1 -4355 2071 1995 * 388 247 32 32 chr17 62185887 62185980 -27318573 + L1MC4 LINE L1 6612 6704 -1338 386 239 92 39 chr17 62185924 62186054 -27318499 - L1MC4 LINE L1 -1337 6705 6569 * 3103 153 0 37 chr17 62186651 62187225 -27317328 + L1MB5 LINE L1 5622 6174 0 355 315 9 0 chr17 62187582 62187690 -27316863 + L2 LINE L2 3157 3265 -7 1854 158 0 3 chr17 62188157 62188467 -27316086 + AluSx SINE Alu 2 310 -2 438 255 161 7 chr17 62189294 62189443 -27315110 - MIR SINE MIR -70 192 21 391 261 133 66 chr17 62190075 62190301 -27314252 - L2 LINE L2 0 3272 3032 1526 136 0 0 chr17 62190987 62191207 -27313346 - AluSq SINE Alu -93 220 1 1784 156 3 3 chr17 62191314 62191615 -27312938 - AluSx SINE Alu -6 306 6 921 306 23 23 chr17 62194019 62194362 -27310191 + L3 LINE CR1 839 1181 -396 260 386 59 46 chr17 62194563 62194716 -27309837 - L2 LINE L2 -22 3250 3096 233 313 15 0 chr17 62195087 62195154 -27309399 - L2 LINE L2 -17 3296 3229 218 103 0 26 chr17 62195666 62195705 -27308848 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 558 314 101 95 chr17 62196082 62196279 -27308274 + L2 LINE L2 2666 2860 -453 1500 181 63 0 chr17 62196279 62196550 -27308003 - AluJb SINE Alu -24 288 1 558 314 101 95 chr17 62196550 62196713 -27307840 + L2 LINE L2 2860 3021 -292 3535 143 24 36 chr17 62196713 62196866 -27307687 - L1PB4 LINE L1 -4 6152 5999 2406 84 0 0 chr17 62196866 62197177 -27307376 - AluSq SINE Alu -2 311 1 3535 143 24 36 chr17 62197177 62197680 -27306873 - L1PB4 LINE L1 -157 5999 5504 558 314 101 95 chr17 62197680 62197939 -27306614 + L2 LINE L2 3021 3312 -1 484 287 66 33 chr17 62198136 62198303 -27306250 + L2 LINE L2 3062 3241 -72 2348 54 3 10 chr17 62198303 62198599 -27305954 - AluY SINE Alu -13 298 5 484 287 66 33 chr17 62198599 62198675 -27305878 + L2 LINE L2 3241 3313 0 1668 155 21 79 chr17 62199868 62200248 -27304305 + L1MB3 LINE L1 5687 6044 -139 292 176 0 0 chr17 62200248 62200299 -27304254 - U2 snRNA snRNA -137 51 1 2107 109 3 3 chr17 62200324 62200626 -27303927 - AluSx SINE Alu -10 302 1 751 153 0 0 chr17 62200639 62200770 -27303783 + L1MB4 LINE L1 6050 6180 0 235 300 47 37 chr17 62200770 62200953 -27303600 + L1MC4a LINE L1 4649 4836 -1310 303 177 13 63 chr17 62201191 62201270 -27303283 + MIR SINE MIR 155 229 -33 408 253 20 14 chr17 62201339 62201485 -27303068 + L1MC4a LINE L1 5813 5959 -1849 252 203 78 16 chr17 62201548 62201612 -27302941 - MER91C DNA MER1_type -24 116 49 1146 222 4 9 chr17 62202063 62202288 -27302265 + MER58A DNA MER1_type 1 224 0 222 330 23 34 chr17 62202297 62202385 -27302168 + MIR SINE MIR 20 106 -156 2259 125 125 10 chr17 62202402 62202785 -27301768 + MSTA LTR MaLR 1 427 -1 422 226 26 97 chr17 62202890 62203045 -27301508 - L1ME4a LINE L1 -162 5959 5816 277 213 43 43 chr17 62203075 62203169 -27301384 - L1MC5 LINE L1 -36 7925 7832 22 0 0 0 chr17 62203294 62203316 -27301237 + GC_rich Low_complexity Low_complexity 1 22 0 434 254 127 8 chr17 62206055 62206181 -27298372 + MIR3 SINE MIR 51 191 -17 216 158 0 0 chr17 62209994 62210032 -27294521 + CT-rich Low_complexity Low_complexity 3 40 0 331 267 11 11 chr17 62210753 62210843 -27293710 + MIR SINE MIR 103 192 -70 423 287 221 0 chr17 62210929 62211065 -27293488 + MIR SINE MIR 42 207 -55 198 0 0 0 chr17 62211122 62211144 -27293409 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 774 132 9 0 chr17 62211147 62211261 -27293292 - FLAM_C SINE Alu -18 115 1 611 227 266 0 chr17 62211324 62211531 -27293022 - MIR SINE MIR 0 262 1 442 257 70 34 chr17 62212903 62213105 -27291448 + MIR SINE MIR 54 262 0 2232 93 3 0 chr17 62213117 62213418 -27291135 - AluSx SINE Alu -10 302 1 208 173 135 0 chr17 62213476 62213528 -27291025 + L2 LINE L2 3186 3244 -69 282 326 38 8 chr17 62213551 62213683 -27290870 - MIR3 SINE MIR -52 156 21 481 296 77 18 chr17 62214926 62215095 -27289458 - L2 LINE L2 0 3313 3135 186 371 0 0 chr17 62215164 62215226 -27289327 - L2 LINE L2 -1 3271 3210 24 32 0 0 chr17 62215284 62215315 -27289238 + AT_rich Low_complexity Low_complexity 1 31 0 2217 75 0 0 chr17 62215318 62215629 -27288924 + AluSg1 SINE Alu 1 311 0 640 311 53 4 chr17 62216930 62217174 -27287379 - MIR SINE MIR 0 262 7 403 317 16 70 chr17 62217337 62217523 -27287030 + MIR SINE MIR 68 243 -19 207 0 0 0 chr17 62218516 62218539 -27286014 + (T)n Simple_repeat Simple_repeat 1 23 0 1006 233 49 5 chr17 62221051 62221274 -27283279 + MIR SINE MIR 7 239 -23 408 316 140 6 chr17 62221551 62221722 -27282831 + MIR SINE MIR 17 210 -52 2161 124 0 16 chr17 62223829 62224144 -27280409 - AluSx SINE Alu 0 312 3 216 333 15 0 chr17 62224281 62224347 -27280206 + MIR SINE MIR 86 152 -110 602 279 13 52 chr17 62224374 62224603 -27279950 + MIR SINE MIR 12 231 -31 1810 164 33 3 chr17 62224716 62225015 -27279538 + AluJo SINE Alu 1 308 -4 1131 74 6 18 chr17 62225470 62225633 -27278920 - L1PA10 LINE L1 0 6168 6008 205 295 154 31 chr17 62225958 62226185 -27278368 - L2 LINE L2 -41 3231 2977 188 224 282 0 chr17 62226290 62226375 -27278178 - L2 LINE L2 -2 3270 3162 1890 166 10 13 chr17 62226430 62226743 -27277810 - AluJo SINE Alu 0 312 1 269 385 40 30 chr17 62226923 62227352 -27277201 - L2 LINE L2 -447 2867 2435 292 210 94 36 chr17 62227483 62227621 -27276932 - Charlie7 DNA MER1_type -29 2583 2438 225 107 36 18 chr17 62232870 62232926 -27271627 + CT-rich Low_complexity Low_complexity 2 58 0 22 0 0 0 chr17 62233602 62233624 -27270929 + AT_rich Low_complexity Low_complexity 1 22 0 502 288 146 9 chr17 62234880 62235106 -27269447 + MIR SINE MIR 2 258 -4 858 160 55 131 chr17 62235600 62235837 -27268716 - MER20 DNA MER1_type 0 219 1 195 259 0 19 chr17 62235935 62235989 -27268564 - MIR3 SINE MIR -11 197 145 682 216 151 15 chr17 62236886 62237085 -27267468 + MIR SINE MIR 2 227 -35 1701 192 3 19 chr17 62237132 62237449 -27267104 - AluJo SINE Alu 0 312 1 313 95 0 0 chr17 62238678 62238720 -27265833 + 5S rRNA rRNA 1 42 -79 241 302 78 47 chr17 62238776 62238905 -27265648 - L2 LINE L2 0 3313 3181 232 265 98 61 chr17 62239372 62239504 -27265049 - MER5A DNA MER1_type -24 165 29 2628 70 3 0 chr17 62240432 62240744 -27263809 - AluSp SINE Alu 0 313 1 387 323 110 20 chr17 62241671 62241925 -27262628 - L2 LINE L2 -1 3271 2995 25 0 0 0 chr17 62242318 62242343 -27262210 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr17 62242828 62242862 -27261691 + (T)n Simple_repeat Simple_repeat 1 34 0 1190 157 25 29 chr17 62243441 62243708 -27260845 + L1MD3 LINE L1 7622 7978 -17 2297 81 0 3 chr17 62243715 62244000 -27260553 - AluSg1 SINE Alu -17 292 9 183 42 0 0 chr17 62244014 62244038 -27260515 + (T)n Simple_repeat Simple_repeat 1 24 0 14471 114 44 35 chr17 62244080 62245259 -27259294 - Tigger1 DNA MER2_type 0 2418 1251 1563 126 175 0 chr17 62245259 62245505 -27259048 + AluSg SINE Alu 1 289 -21 14471 114 44 35 chr17 62245505 62246722 -27257831 - Tigger1 DNA MER2_type -1167 1251 1 388 299 142 15 chr17 62247168 62247372 -27257181 - L1ME4a LINE L1 -5 6116 5887 2322 135 30 25 chr17 62247438 62247800 -27256753 - THE1B LTR MaLR 0 364 1 711 272 76 80 chr17 62248420 62248934 -27255619 - L1ME4a LINE L1 -285 5885 5374 1192 171 19 57 chr17 62248950 62249112 -27255441 - L1MA4 LINE L1 -11 6289 6139 689 201 0 15 chr17 62249112 62249246 -27255307 - FLAM_A SINE Alu -1 132 1 1192 171 19 57 chr17 62249246 62249347 -27255206 - L1MA4 LINE L1 -161 6139 6036 21 36 0 0 chr17 62250412 62250440 -27254113 + AT_rich Low_complexity Low_complexity 1 28 0 200 208 21 0 chr17 62250804 62250852 -27253701 + GA-rich Low_complexity Low_complexity 3 51 0 2145 127 0 3 chr17 62250912 62251211 -27253342 + AluSc SINE Alu 1 298 -11 2231 112 0 3 chr17 62251364 62251669 -27252884 - AluSx SINE Alu -8 304 1 399 317 25 8 chr17 62251877 62251997 -27252556 - L2 LINE L2 -12 3301 3180 293 221 211 0 chr17 62252575 62252670 -27251883 - MIR SINE MIR -62 200 86 376 218 168 10 chr17 62252921 62253022 -27251531 - L2 LINE L2 -4 3309 3193 451 148 0 34 chr17 62253644 62253782 -27250771 - AluSp/q SINE Alu 0 313 212 1776 182 20 54 chr17 62254091 62254370 -27250183 + MLT2C1 LTR ERVL 6 268 -129 1960 131 3 48 chr17 62254370 62254684 -27249869 - AluSx SINE Alu -12 300 1 1776 182 20 54 chr17 62254684 62254810 -27249743 + MLT2C1 LTR ERVL 268 397 0 411 323 39 0 chr17 62254839 62254969 -27249584 + L2 LINE L2 3137 3271 -1 297 234 357 13 chr17 62255007 62255161 -27249392 + MIR SINE MIR 31 237 -25 249 197 171 0 chr17 62255222 62255298 -27249255 + MIR SINE MIR 168 256 -6 2153 119 27 0 chr17 62257278 62257571 -27246982 - AluSx SINE Alu -11 301 1 184 278 0 19 chr17 62257646 62257700 -27246853 + MIR SINE MIR 108 160 -102 446 267 34 107 chr17 62257779 62258052 -27246501 + MIR SINE MIR 9 262 0 1276 189 15 30 chr17 62258511 62258776 -27245777 - AluJo SINE Alu -26 286 26 703 150 0 102 chr17 62258796 62258943 -27245610 - FLAM_C SINE Alu -1 132 1 2353 83 0 0 chr17 62259801 62260090 -27244463 - AluSc SINE Alu -20 289 1 207 341 159 40 chr17 62260662 62260878 -27243675 - L2 LINE L2 -17 3255 3066 1722 170 29 96 chr17 62260878 62261296 -27243257 - MLT1B LTR MaLR 0 390 1 207 341 159 40 chr17 62261296 62261481 -27243072 - L2 LINE L2 -206 3066 2806 2471 88 0 0 chr17 62261510 62261815 -27242738 - AluSc SINE Alu -4 305 1 193 206 29 73 chr17 62261815 62261876 -27242677 - MER5B DNA MER1_type -115 63 4 565 217 134 13 chr17 62261889 62262046 -27242507 - MER5B DNA MER1_type -2 176 1 297 294 11 22 chr17 62263166 62263258 -27241295 - MIR3 SINE MIR -6 202 112 1863 152 10 23 chr17 62263268 62263571 -27240982 - AluJb SINE Alu -13 299 1 986 145 0 0 chr17 62264446 62264598 -27239955 - AluJb SINE Alu -2 310 159 2329 104 0 0 chr17 62264812 62265109 -27239444 + AluSx SINE Alu 1 297 -15 215 269 0 0 chr17 62265121 62265173 -27239380 + (TGGG)n Simple_repeat Simple_repeat 3 54 0 369 339 57 8 chr17 62266202 62266326 -27238227 - MIR3 SINE MIR -44 164 35 297 163 62 12 chr17 62266336 62266416 -27238137 + HsTC2 DNA Tc2 1 84 -1814 1826 176 7 3 chr17 62266569 62266859 -27237694 - AluJb SINE Alu -21 291 1 2252 101 0 3 chr17 62268746 62269042 -27235511 - AluSx SINE Alu -17 295 1 260 316 0 0 chr17 62269049 62269125 -27235428 + L2 LINE L2 3192 3267 -46 759 186 16 0 chr17 62270972 62271101 -27233452 + AluJo SINE Alu 2 132 -180 2788 128 57 2 chr17 62271968 62272405 -27232148 + L1PB3 LINE L1 5694 6154 0 303 317 114 43 chr17 62272567 62273034 -27231519 + L2 LINE L2 2554 3060 -253 539 282 92 39 chr17 62273100 62273405 -27231148 + MER46C DNA MER2_type 8 328 -10 183 302 41 76 chr17 62273419 62273591 -27230962 + MIR SINE MIR 48 213 -49 * 849 298 13 0 chr17 62273562 62273790 -27230763 - MIR SINE MIR 0 262 32 928 188 18 12 chr17 62274075 62274240 -27230313 + AluJo SINE Alu 137 302 0 344 198 126 36 chr17 62274241 62274352 -27230201 - MIR3 SINE MIR -76 132 12 964 111 12 0 chr17 62275151 62275322 -27229231 + (TCCA)n Simple_repeat Simple_repeat 2 174 0 490 257 70 61 chr17 62275541 62275755 -27228798 - L1ME4a LINE L1 -290 5831 5616 596 92 82 20 chr17 62275928 62276026 -27228527 + AluSg/x SINE Alu 173 276 -36 228 35 0 0 chr17 62276867 62276896 -27227657 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2067 109 20 0 chr17 62277219 62277523 -27227030 - AluSx SINE Alu -2 310 1 194 164 279 0 chr17 62277765 62277826 -27226727 + MIR3 SINE MIR 83 160 -48 2240 84 0 19 chr17 62277847 62278158 -27226395 - AluSx SINE Alu -7 305 1 2197 110 0 0 chr17 62279045 62279345 -27225208 - AluSx SINE Alu -12 300 1 2270 80 0 7 chr17 62279688 62279989 -27224564 + AluSc SINE Alu 1 299 -10 646 202 16 8 chr17 62279989 62280118 -27224435 + MIR SINE MIR 22 151 -111 303 248 40 50 chr17 62280218 62280319 -27224234 + MIR SINE MIR 163 262 0 2047 110 0 17 chr17 62280475 62280776 -27223777 - AluSx SINE Alu -16 296 1 24 0 0 0 chr17 62280796 62280820 -27223733 + AT_rich Low_complexity Low_complexity 1 24 0 185 301 84 12 chr17 62280946 62281029 -27223524 + MIR SINE MIR 44 132 -130 2217 109 0 0 chr17 62281544 62281856 -27222697 + AluSx SINE Alu 1 312 0 977 237 15 0 chr17 62282405 62282603 -27221950 + MER58A DNA MER1_type 24 224 0 1157 266 238 28 chr17 62282605 62283384 -27221169 - L2 LINE L2 -17 3296 2361 1086 236 45 20 chr17 62283802 62284124 -27220429 - MLT1F1 LTR MaLR 0 587 208 261 354 31 16 chr17 62284177 62284304 -27220249 - MIR SINE MIR -113 149 21 385 318 90 38 chr17 62284854 62285065 -27219488 - L1ME4a LINE L1 -123 5998 5777 2024 129 3 3 chr17 62285114 62285416 -27219137 - AluSx SINE Alu -4 308 7 527 115 23 11 chr17 62285423 62285510 -27219043 - AluSg/x SINE Alu -14 296 209 212 298 32 53 chr17 62287031 62287125 -27217428 + MIR SINE MIR 23 114 -148 * 442 303 186 9 chr17 62287107 62287328 -27217225 - MIR SINE MIR -1 261 2 224 362 43 0 chr17 62287376 62287470 -27217083 + MIR SINE MIR 104 201 -61 180 229 0 0 chr17 62288247 62288282 -27216271 + MER5A DNA MER1_type 32 66 -123 332 333 0 0 chr17 62288890 62288977 -27215576 + polypyrimidine Low_complexity Low_complexity 3 89 0 3967 237 97 51 chr17 62290363 62291861 -27212692 - L1MC4 LINE L1 0 8042 6312 1937 78 0 0 chr17 62291861 62292105 -27212448 + AluSg SINE Alu 47 290 -20 3967 237 97 51 chr17 62292105 62292564 -27211989 - L1MC4 LINE L1 -1730 6312 5875 1952 115 42 0 chr17 62292581 62292869 -27211684 + AluSx SINE Alu 1 300 -12 511 165 116 0 chr17 62292869 62292990 -27211563 - L1MC3 LINE L1 -170 7615 7481 455 261 20 13 chr17 62293109 62293262 -27211291 + MER113 DNA MER1_type? 30 183 -338 1731 174 13 0 chr17 62293641 62293939 -27210614 - AluJb SINE Alu -10 302 1 310 248 43 43 chr17 62294901 62295018 -27209535 - L2 LINE L2 -5 3267 3151 2429 181 17 2 chr17 62295400 62295820 -27208733 + MSTB LTR MaLR 1 426 0 195 114 0 0 chr17 62296313 62296348 -27208205 + (TG)n Simple_repeat Simple_repeat 1 35 0 270 0 0 0 chr17 62297258 62297288 -27207265 + (TG)n Simple_repeat Simple_repeat 2 31 0 850 207 39 24 chr17 62297851 62298059 -27206494 - LTR33 LTR ERVL -1 520 310 654 258 140 0 chr17 62298115 62298293 -27206260 - LTR33 LTR ERVL -318 203 1 1933 145 3 0 chr17 62298606 62298909 -27205644 + AluSx SINE Alu 1 304 -8 207 167 0 0 chr17 62298962 62299004 -27205549 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 329 293 86 17 chr17 62299101 62299217 -27205336 + L2 LINE L2 3190 3313 0 1703 187 15 36 chr17 62300886 62301277 -27203276 - MER58D DNA MER1_type -2 384 2 277 298 43 0 chr17 62301433 62301527 -27203026 - L2 LINE L2 -54 3259 3162 313 278 139 49 chr17 62301546 62301931 -27202622 - L2 LINE L2 -253 3060 2641 734 285 59 57 chr17 62302026 62302415 -27202138 - MLT1K LTR MaLR -3 585 196 283 259 36 62 chr17 62302724 62302836 -27201717 + MIR SINE MIR 20 128 -80 1784 112 0 8 chr17 62302938 62303205 -27201348 - AluSq SINE Alu -48 265 1 252 77 0 0 chr17 62305220 62305259 -27199294 + (TG)n Simple_repeat Simple_repeat 2 40 0 400 307 0 11 chr17 62305414 62305502 -27199051 + MER91A DNA MER1_type 109 195 -1 212 273 114 0 chr17 62305618 62305706 -27198847 - MIR3 SINE MIR -28 180 83 31 26 0 0 chr17 62306301 62306339 -27198214 + AT_rich Low_complexity Low_complexity 1 38 0 370 355 24 18 chr17 62306394 62306563 -27197990 + MIR SINE MIR 12 181 -81 2252 158 45 24 chr17 62308134 62308349 -27196204 - Tigger2a DNA MER2_type -2276 432 223 1652 170 3 22 chr17 62308349 62308660 -27195893 + AluSx SINE Alu 1 305 -7 2252 158 45 24 chr17 62308660 62308867 -27195686 - Tigger2a DNA MER2_type -2485 223 1 2319 190 28 0 chr17 62309918 62310344 -27194209 + L1MB3 LINE L1 5519 5956 -227 1874 135 0 3 chr17 62310486 62310840 -27193713 + AluSx SINE Alu 1 353 0 225 246 14 58 chr17 62312187 62312256 -27192297 - MIR3 SINE MIR -28 180 115 328 248 116 62 chr17 62312372 62312501 -27192052 - L2 LINE L2 0 3272 3137 198 283 19 0 chr17 62312876 62312929 -27191624 + L2 LINE L2 3201 3254 -18 1456 173 14 14 chr17 62312949 62313238 -27191315 - AluSx SINE Alu -22 290 2 248 271 0 14 chr17 62313243 62313313 -27191240 - MIR SINE MIR -107 155 87 937 221 77 0 chr17 62315065 62315287 -27189266 + Charlie1 DNA MER1_type 1 239 -2522 1791 143 3 19 chr17 62315294 62315602 -27188951 + AluSx SINE Alu 1 303 -9 556 158 67 8 chr17 62315603 62315723 -27188830 + Charlie1 DNA MER1_type 2633 2759 -2 341 360 0 0 chr17 62315837 62315951 -27188602 - L2 LINE L2 -218 3054 2941 205 286 0 43 chr17 62316047 62316117 -27188436 - MER5B DNA MER1_type -6 172 106 632 241 32 13 chr17 62316686 62316844 -27187709 - MIR SINE MIR -21 241 81 573 250 115 55 chr17 62318445 62318577 -27185976 - L1ME4a LINE L1 -77 6044 5921 189 0 0 0 chr17 62318577 62318598 -27185955 + (CA)n Simple_repeat Simple_repeat 2 22 0 573 250 115 55 chr17 62318598 62318901 -27185652 - L1ME4a LINE L1 -200 5921 5583 24 77 0 0 chr17 62318961 62319013 -27185540 + AT_rich Low_complexity Low_complexity 1 52 0 308 234 131 9 chr17 62319474 62319581 -27184972 - L1ME4a LINE L1 -35 6086 5967 1551 127 27 31 chr17 62319993 62320252 -27184301 + AluSx SINE Alu 1 258 -54 448 298 117 29 chr17 62320262 62320433 -27184120 - MIR3 SINE MIR -7 201 16 269 308 28 9 chr17 62320482 62320589 -27183964 - LTR67 LTR ERVL 0 557 449 2129 104 0 7 chr17 62321530 62321828 -27182725 + AluSx SINE Alu 10 305 -7 370 295 54 23 chr17 62323299 62323428 -27181125 - MIR3 SINE MIR -63 145 13 2302 61 7 0 chr17 62323949 62324244 -27180309 - AluY SINE Alu -14 297 1 2376 82 0 0 chr17 62324818 62325123 -27179430 + AluY SINE Alu 1 305 -6 1409 136 118 40 chr17 62325141 62325277 -27179276 - AluSx SINE Alu -19 293 169 2207 107 0 0 chr17 62325277 62325586 -27178967 - AluSg SINE Alu -1 309 1 1409 136 118 40 chr17 62325586 62325721 -27178832 - AluSx SINE Alu -143 169 1 198 143 0 0 chr17 62326486 62326521 -27178032 + (T)n Simple_repeat Simple_repeat 1 35 0 211 102 20 41 chr17 62326944 62326993 -27177560 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 1988 132 7 0 chr17 62328095 62328390 -27176163 - AluJb SINE Alu -15 297 1 587 168 174 37 chr17 62328616 62328777 -27175776 + MER3 DNA MER1_type 5 187 -22 184 310 103 0 chr17 62328971 62329029 -27175524 - L2 LINE L2 -63 3209 3146 587 297 117 43 chr17 62329164 62329609 -27174944 - L2 LINE L2 0 3313 2836 2194 106 0 13 chr17 62330399 62330711 -27173842 + AluSx SINE Alu 1 308 -4 205 344 0 33 chr17 62331030 62331120 -27173433 + L2 LINE L2 1915 2001 -1313 2244 234 64 2 chr17 62331134 62331634 -27172919 - MLT1G LTR MaLR 0 590 60 556 351 162 23 chr17 62331722 62332371 -27172182 + L2 LINE L2 2133 2871 -443 1444 130 9 4 chr17 62332472 62332703 -27171850 + AluSq SINE Alu 78 309 -4 278 257 54 0 chr17 62332810 62332884 -27171669 - MLT1H1 LTR MaLR 0 555 478 525 228 88 9 chr17 62333489 62333603 -27170950 - L2 LINE L2 -3 3310 3188 329 229 0 0 chr17 62333808 62333869 -27170684 + L2 LINE L2 3210 3270 -2 193 250 213 7 chr17 62334705 62334841 -27169712 - MIR SINE MIR -1 261 98 1954 145 10 0 chr17 62335675 62335979 -27168574 - AluSx SINE Alu -5 307 1 2153 117 0 3 chr17 62335992 62336300 -27168253 - AluSg SINE Alu 0 310 4 208 317 0 0 chr17 62336615 62336675 -27167878 + L2 LINE L2 3213 3272 0 189 262 0 0 chr17 62336746 62336788 -27167765 - L2 LINE L2 -8 3305 3264 * 200 258 269 11 chr17 62336754 62336847 -27167706 - MIR SINE MIR -10 252 136 1428 174 3 59 chr17 62336982 62337287 -27167266 + AluJo SINE Alu 1 288 -24 761 202 36 42 chr17 62337355 62337523 -27167030 + MER5B DNA MER1_type 12 178 0 3224 132 26 81 chr17 62339897 62340164 -27164389 - L1MB8 LINE L1 0 6178 5898 1470 169 0 0 chr17 62340164 62340400 -27164153 + MER46A DNA MER2_type 1 236 0 3224 132 26 81 chr17 62340400 62340695 -27163858 - L1MB8 LINE L1 -280 5898 5656 2060 110 11 0 chr17 62340695 62341008 -27163545 - AluSq SINE Alu 0 316 1 3224 132 26 81 chr17 62341008 62341124 -27163429 - L1MB8 LINE L1 -522 5656 5535 411 308 86 7 chr17 62341275 62341469 -27163084 + MIR SINE MIR 23 233 -29 1991 203 55 35 chr17 62341911 62342364 -27162189 - MLT1C LTR MaLR 0 467 6 308 336 9 0 chr17 62342468 62342581 -27161972 + (TGG)n Simple_repeat Simple_repeat 3 116 0 242 371 15 23 chr17 62342882 62343014 -27161539 + MIR3 SINE MIR 64 194 -14 324 19 37 19 chr17 62343408 62343462 -27161091 + (CA)n Simple_repeat Simple_repeat 2 56 0 321 277 71 18 chr17 62345667 62345779 -27158774 - MIR SINE MIR -12 250 133 237 281 96 30 chr17 62346745 62346880 -27157673 - MIR3 SINE MIR -3 205 62 234 193 0 0 chr17 62350289 62350346 -27154207 + CT-rich Low_complexity Low_complexity 4 60 0 279 0 0 0 chr17 62350960 62350991 -27153562 + (CA)n Simple_repeat Simple_repeat 1 31 0 241 298 65 88 chr17 62351074 62351336 -27153217 - MIR SINE MIR -5 257 2 237 354 16 29 chr17 62351451 62351626 -27152927 - MIR SINE MIR -66 142 1 1099 234 23 0 chr17 62352220 62352438 -27152115 - MER58A DNA MER1_type -1 223 1 2248 88 0 3 chr17 62356670 62356966 -27147587 + AluSg SINE Alu 4 298 -12 266 230 310 11 chr17 62357054 62357141 -27147412 + MER81 DNA DNA 1 113 -1 23 0 0 0 chr17 62357521 62357544 -27147009 + AT_rich Low_complexity Low_complexity 1 23 0 1741 144 0 11 chr17 62357920 62358239 -27146314 - AluJb SINE Alu 0 324 9 1690 120 0 0 chr17 62358339 62358572 -27145981 - AluSx SINE Alu -79 233 1 985 213 14 14 chr17 62358792 62359013 -27145540 - MER58A DNA MER1_type -1 223 3 951 277 8 17 chr17 62359038 62359276 -27145277 + MIR SINE MIR 19 254 -8 341 330 55 0 chr17 62360154 62360263 -27144290 - L2 LINE L2 0 3272 3158 375 284 50 14 chr17 62360420 62360561 -27143992 + L2 LINE L2 3127 3272 0 2003 111 0 33 chr17 62360627 62360934 -27143619 - AluSq SINE Alu -16 297 1 370 277 144 26 chr17 62361656 62361851 -27142702 + MIR SINE MIR 30 247 -15 1264 167 47 5 chr17 62364248 62364463 -27140090 - MER58A DNA MER1_type 0 224 1 2205 81 0 36 chr17 62365596 62365903 -27138650 - AluSx SINE Alu -11 301 6 218 151 340 0 chr17 62365991 62366044 -27138509 - MIR3 SINE MIR -23 185 115 203 122 0 24 chr17 62367759 62367800 -27136753 + (TCC)n Simple_repeat Simple_repeat 2 41 0 1506 163 95 3 chr17 62367837 62368120 -27136433 + AluJo SINE Alu 3 311 -1 508 299 42 42 chr17 62368338 62368414 -27136139 - MIR SINE MIR 0 262 187 2119 115 0 0 chr17 62368414 62368709 -27135844 + AluSg SINE Alu 1 295 -15 508 299 42 42 chr17 62368709 62368873 -27135680 - MIR SINE MIR -74 188 22 283 290 15 61 chr17 62369598 62369729 -27134824 + MIR3 SINE MIR 71 195 -13 226 247 104 13 chr17 62370549 62370626 -27133927 + MIR SINE MIR 66 149 -113 268 262 98 8 chr17 62371566 62371579 -27132974 - HAL1b LINE L1 -23 1325 1313 612 254 81 81 chr17 62371579 62372122 -27132431 - L1ME4a LINE L1 -59 6062 1193 180 280 20 0 chr17 62372827 62372877 -27131676 - L2 LINE L2 -1 3312 3262 2159 116 0 3 chr17 62373349 62373659 -27130894 + AluSx SINE Alu 1 309 -3 207 294 73 46 chr17 62373781 62373890 -27130663 + MIR SINE MIR 149 260 -2 223 285 179 88 chr17 62373912 62374186 -27130367 - L3 LINE CR1 -39 1538 1240 356 310 35 9 chr17 62374345 62374461 -27130092 - MER5B DNA MER1_type -1 177 59 933 180 9 28 chr17 62374461 62374678 -27129875 - AluJo SINE Alu -15 297 85 682 218 0 0 chr17 62374679 62374803 -27129750 - FRAM SINE Alu -52 124 1 248 301 0 48 chr17 62374901 62374984 -27129569 - MIR3 SINE MIR -120 88 10 184 284 54 14 chr17 62375050 62375124 -27129429 - L3 LINE CR1 -358 1219 1143 226 260 27 27 chr17 62375146 62375219 -27129334 - L2 LINE L2 0 3272 3200 242 368 0 0 chr17 62375746 62375833 -27128720 + L3 LINE CR1 1473 1559 -18 25 31 0 0 chr17 62375964 62375996 -27128557 + AT_rich Low_complexity Low_complexity 1 32 0 417 313 152 14 chr17 62376091 62376308 -27128245 + MIR SINE MIR 10 256 -6 193 194 0 0 chr17 62378415 62378451 -27126102 - L3 LINE CR1 -3 1574 1539 1474 201 156 10 chr17 62379441 62379844 -27124709 + MLT1C LTR MaLR 6 467 0 27 0 0 0 chr17 62380111 62380138 -27124415 + AT_rich Low_complexity Low_complexity 1 27 0 2971 138 11 62 chr17 62380178 62380338 -27124215 - L1MA7 LINE L1 -2 6289 6122 2138 125 3 3 chr17 62380338 62380634 -27123919 - AluSx SINE Alu -16 296 1 2971 138 11 62 chr17 62380634 62381103 -27123450 - L1MA7 LINE L1 -169 6122 5692 551 295 67 95 chr17 62381105 62381765 -27122788 - L2 LINE L2 -11 3302 2651 589 276 105 21 chr17 62382360 62382599 -27121954 + MIR SINE MIR 1 259 -3 192 322 136 51 chr17 62382989 62383107 -27121446 - L3b LINE CR1 -1 1582 1455 1774 98 8 24 chr17 62385035 62385281 -27119272 - AluSq SINE Alu -16 297 56 1423 96 10 15 chr17 62385788 62385987 -27118566 - AluSg/x SINE Alu -7 305 108 486 0 0 0 chr17 62386648 62386702 -27117851 + (TG)n Simple_repeat Simple_repeat 2 55 0 244 306 61 31 chr17 62387975 62388073 -27116480 + MIR SINE MIR 162 262 0 2487 61 0 0 chr17 62388276 62388569 -27115984 - AluSc SINE Alu -16 293 1 193 275 99 38 chr17 62389784 62389915 -27114638 - MIR3 SINE MIR -55 153 15 444 241 93 0 chr17 62389935 62390113 -27114440 + MIR SINE MIR 51 250 -12 201 327 0 0 chr17 62390476 62390531 -27114022 - MIR SINE MIR -85 177 123 2308 91 10 3 chr17 62390537 62390835 -27113718 + AluSg SINE Alu 1 300 -10 526 287 156 46 chr17 62392147 62392603 -27111950 - L2 LINE L2 -1 3312 2807 200 318 139 16 chr17 62392971 62393100 -27111453 - L2 LINE L2 -256 3016 2872 1611 178 3 54 chr17 62393324 62393638 -27110915 - AluJo SINE Alu -14 298 1 466 292 36 26 chr17 62395047 62395239 -27109314 + MIR SINE MIR 69 262 0 2179 113 0 0 chr17 62395980 62396289 -27108264 + AluSc SINE Alu 1 309 0 603 0 0 0 chr17 62396490 62396557 -27107996 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2114 113 38 3 chr17 62396639 62396931 -27107622 + AluSx SINE Alu 7 308 -4 266 293 9 69 chr17 62398591 62398707 -27105846 - MIR3 SINE MIR -90 118 10 436 343 64 14 chr17 62398936 62399155 -27105398 - MIR SINE MIR -1 261 32 2125 144 17 0 chr17 62399237 62399535 -27105018 - AluSx SINE Alu -9 303 1 540 258 162 35 chr17 62399849 62399895 -27104658 - MIR SINE MIR -21 241 202 838 63 111 8 chr17 62399895 62400021 -27104532 - MER85 DNA T2_type 0 139 1 540 258 162 35 chr17 62400021 62400172 -27104381 - MIR SINE MIR -60 202 19 2174 105 3 3 chr17 62400661 62400957 -27103596 - AluSc SINE Alu -1 308 13 2175 81 42 14 chr17 62402562 62402846 -27101707 + AluSg1 SINE Alu 1 292 -17 225 224 71 35 chr17 62403369 62403454 -27101099 - MIR3 SINE MIR -23 185 98 284 250 86 17 chr17 62403604 62403720 -27100833 + MER103 DNA DNA 43 166 0 25 0 0 0 chr17 62403750 62403775 -27100778 + AT_rich Low_complexity Low_complexity 1 25 0 1492 221 51 0 chr17 62403847 62403966 -27100587 + AluJo SINE Alu 1 113 -201 228 35 0 0 chr17 62403966 62403995 -27100558 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 1492 221 51 0 chr17 62403995 62404175 -27100378 + AluJo SINE Alu 113 314 0 219 238 16 48 chr17 62404242 62404334 -27100219 + (TA)n Simple_repeat Simple_repeat 2 90 -33 2646 50 0 0 chr17 62404334 62404634 -27099919 - AluY SINE Alu -11 300 1 219 238 16 48 chr17 62404634 62404667 -27099886 + (TA)n Simple_repeat Simple_repeat 90 123 0 1939 159 0 23 chr17 62405943 62406081 -27098472 + AluJo SINE Alu 1 141 -171 2278 96 3 0 chr17 62406081 62406409 -27098144 + AluSq SINE Alu 1 329 0 1939 159 0 23 chr17 62406409 62406571 -27097982 + AluJo SINE Alu 141 295 -17 211 157 39 0 chr17 62406590 62406641 -27097912 + A-rich Low_complexity Low_complexity 3 55 0 212 83 0 28 chr17 62406705 62406741 -27097812 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 2207 87 11 7 chr17 62407768 62408055 -27096498 - AluSx SINE Alu -12 300 13 1960 175 3 0 chr17 62408160 62408497 -27096056 - MLT1C LTR MaLR 0 467 130 429 20 0 0 chr17 62410225 62410275 -27094278 + (TG)n Simple_repeat Simple_repeat 2 51 0 1947 148 0 4 chr17 62410536 62410814 -27093739 + AluJb SINE Alu 24 300 -12 837 134 0 22 chr17 62411532 62411666 -27092887 + FLAM_C SINE Alu 1 131 -2 438 260 18 4 chr17 62413673 62413960 -27090593 + (TGGA)n Simple_repeat Simple_repeat 1 291 0 630 213 99 91 chr17 62414396 62414597 -27089956 + MIR SINE MIR 8 213 -49 2385 71 24 7 chr17 62414597 62414894 -27089659 + AluY SINE Alu 1 302 -9 630 213 99 91 chr17 62414894 62414945 -27089608 + MIR SINE MIR 213 262 0 478 276 72 72 chr17 62416323 62416613 -27087940 + L2 LINE L2 2950 3239 -33 2299 122 0 0 chr17 62416627 62416930 -27087623 - AluSx SINE Alu -9 303 1 757 198 161 5 chr17 62417109 62417301 -27087252 + MIR SINE MIR 4 225 -37 1500 132 44 0 chr17 62417631 62417858 -27086695 - AluSg/x SINE Alu 0 312 76 206 275 0 0 chr17 62418216 62418256 -27086297 + G-rich Low_complexity Low_complexity 3 42 0 253 173 0 0 chr17 62418452 62418504 -27086049 + L1PA7 LINE L1 6103 6154 0 386 248 23 31 chr17 62419123 62419252 -27085301 + HsTC2c DNA Tc2 601 728 -1 1404 159 5 9 chr17 62419390 62419610 -27084943 - AluJb SINE Alu -9 303 85 1235 341 133 26 chr17 62419775 62420197 -27084356 - L1P LINE L1 -783 5363 4897 481 152 0 0 chr17 62420297 62420376 -27084177 - MER45A DNA AcHobo 0 178 100 1243 108 0 18 chr17 62420376 62420543 -27084010 + AluSg/x SINE Alu 132 295 -15 260 236 18 0 chr17 62420543 62420598 -27083955 - MER45A DNA AcHobo -76 102 47 829 202 30 20 chr17 62421211 62421414 -27083139 - MER2 DNA MER2_type -135 210 6 188 386 14 0 chr17 62421979 62422049 -27082504 - L2 LINE L2 -210 3062 2992 184 261 26 70 chr17 62422782 62422897 -27081656 - MIR SINE MIR -41 221 112 221 217 116 108 chr17 62424032 62424161 -27080392 - MIR SINE MIR -2 260 131 324 189 189 11 chr17 62424163 62424253 -27080300 - L2 LINE L2 0 3313 3208 312 278 34 49 chr17 62424473 62424623 -27079930 + MIR SINE MIR 8 154 -71 204 233 0 111 chr17 62426053 62426143 -27078410 - MIR SINE MIR -88 174 95 279 214 10 92 chr17 62426258 62426356 -27078197 - MIR SINE MIR -74 188 99 482 278 40 23 chr17 62426786 62426959 -27077594 - MIR SINE MIR -18 244 69 402 280 40 16 chr17 62426971 62427096 -27077457 - L2 LINE L2 -6 3266 3139 1093 138 138 77 chr17 62428236 62428352 -27076201 + L1MB4 LINE L1 5849 5956 -224 1963 153 0 23 chr17 62428352 62428659 -27075894 + AluJb SINE Alu 6 305 -7 1093 138 138 77 chr17 62428659 62428805 -27075748 + L1MB4 LINE L1 5956 6135 -45 2288 83 31 0 chr17 62428805 62429093 -27075460 + AluSx SINE Alu 1 297 -15 1093 138 138 77 chr17 62429093 62429140 -27075413 + L1MB4 LINE L1 6135 6178 -2 1312 202 186 54 chr17 62430172 62430618 -27073935 - MLT1D LTR MaLR 0 505 1 217 277 46 0 chr17 62431278 62431343 -27073210 + L3 LINE CR1 1498 1565 -12 1261 216 71 15 chr17 62431968 62432292 -27072261 - MLT1A1 LTR MaLR 0 365 24 339 295 50 7 chr17 62432389 62432528 -27072025 - MIR3 SINE MIR -49 159 15 955 193 137 4 chr17 62433676 62433909 -27070644 - MER58B DNA MER1_type -2 339 76 925 180 73 44 chr17 62433909 62434115 -27070438 + AluJo SINE Alu 1 212 -100 2415 97 0 0 chr17 62435019 62435317 -27069236 - AluSx SINE Alu -14 298 1 222 322 34 34 chr17 62436167 62436285 -27068268 + MIR SINE MIR 135 252 -10 213 322 58 33 chr17 62436430 62436551 -27068002 + L3b LINE CR1 1293 1416 -167 202 316 0 0 chr17 62436721 62436778 -27067775 - MIR SINE MIR -115 93 37 209 224 0 0 chr17 62436786 62436835 -27067718 + L2 LINE L2 3264 3312 -1 608 304 92 29 chr17 62437148 62437388 -27067165 - MIR SINE MIR -2 260 6 331 308 81 24 chr17 62438137 62438348 -27066205 - MIR SINE MIR -38 224 2 1419 113 45 9 chr17 62438457 62438679 -27065874 - MER30 DNA MER1_type 0 230 1 233 29 0 29 chr17 62438688 62438723 -27065830 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1928 141 3 11 chr17 62438725 62439009 -27065544 - AluSx SINE Alu -30 282 1 566 233 157 0 chr17 62439137 62439296 -27065257 + MER5A DNA MER1_type 4 187 -2 218 336 64 8 chr17 62439708 62439833 -27064720 + MIR SINE MIR 21 152 -56 831 218 18 0 chr17 62439999 62440164 -27064389 - MER58A DNA MER1_type 0 168 1 427 287 90 6 chr17 62440470 62440637 -27063916 + MIR SINE MIR 65 245 -17 775 150 0 8 chr17 62442851 62442984 -27061569 - FLAM_C SINE Alu -1 132 1 482 233 9 9 chr17 62443454 62443570 -27060983 - MIR3 SINE MIR -52 156 41 514 290 104 14 chr17 62448415 62448636 -27055917 - MIR SINE MIR -1 261 21 207 325 159 8 chr17 62449430 62449556 -27054997 + L2 LINE L2 3118 3262 -10 203 328 16 0 chr17 62450777 62450838 -27053715 - MIR SINE MIR -58 150 89 2299 92 3 7 chr17 62452580 62452884 -27051669 + AluSq SINE Alu 1 303 -10 1420 72 0 0 chr17 62454010 62454176 -27050377 - AluSx SINE Alu -146 166 1 452 274 32 32 chr17 62454426 62454583 -27049970 + MIR SINE MIR 8 164 -98 227 202 0 38 chr17 62455715 62455806 -27048747 - MIR SINE MIR -15 193 108 595 237 137 38 chr17 62455835 62456046 -27048507 + MIR SINE MIR 31 262 0 323 213 21 0 chr17 62456047 62456141 -27048412 + (TCCA)n Simple_repeat Simple_repeat 1 96 0 2449 98 0 0 chr17 62456736 62457042 -27047511 + AluSx SINE Alu 1 306 -6 557 235 8 0 chr17 62457048 62457180 -27047373 - L1PB4 LINE L1 -13 6143 6011 243 79 0 0 chr17 62457600 62457638 -27046915 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 408 71 0 0 chr17 62457648 62457704 -27046849 + (CA)n Simple_repeat Simple_repeat 1 56 0 471 266 177 21 chr17 62458875 62459067 -27045486 - MIR SINE MIR -2 260 39 399 312 89 34 chr17 62459266 62459647 -27044906 + L2 LINE L2 2871 3272 0 368 335 116 7 chr17 62461831 62461986 -27042567 - MIR SINE MIR -71 191 20 378 261 67 8 chr17 62464001 62464135 -27040418 + L1ME4a LINE L1 5773 5914 -207 735 234 0 7 chr17 62464146 62464300 -27040253 + MER5B DNA MER1_type 26 178 0 2574 75 0 0 chr17 62465162 62465468 -27039085 + AluSx SINE Alu 1 306 -6 2288 106 3 0 chr17 62466895 62467188 -27037365 - AluSq SINE Alu -19 294 1 334 298 37 64 chr17 62467527 62467715 -27036838 + MER5A DNA MER1_type 7 189 0 1679 50 0 9 chr17 62468677 62468896 -27035657 - L1PA5 LINE L1 0 6154 5938 2351 110 0 0 chr17 62469005 62469305 -27035248 + AluSx SINE Alu 1 300 -12 727 194 44 33 chr17 62469486 62469666 -27034887 - MLT1F LTR MaLR -7 535 354 606 262 93 43 chr17 62469712 62470039 -27034514 - MLT1F LTR MaLR -286 304 1 349 262 31 0 chr17 62470068 62470182 -27034371 - MIR SINE MIR -65 143 40 1596 161 70 35 chr17 62470602 62470888 -27033665 + AluJo SINE Alu 1 296 -16 630 349 16 12 chr17 62472203 62472458 -27032095 + MIR SINE MIR 7 262 0 315 0 0 0 chr17 62472512 62472547 -27032006 + (TA)n Simple_repeat Simple_repeat 2 36 0 312 246 206 40 chr17 62473212 62473387 -27031166 + L1ME4a LINE L1 5897 6100 -21 1994 99 40 4 chr17 62473649 62473944 -27030609 - AluSg SINE Alu 0 305 1 2321 95 3 3 chr17 62474558 62474864 -27029689 + AluSp SINE Alu 1 306 -7 495 0 0 0 chr17 62477272 62477327 -27027226 + (TG)n Simple_repeat Simple_repeat 2 56 0 776 284 98 62 chr17 62477380 62477830 -27026723 - MARNA DNA Mariner -74 512 47 718 168 7 51 chr17 62477854 62477991 -27026562 - FLAM_C SINE Alu -1 132 2 222 280 97 11 chr17 62479095 62479188 -27025365 + MIR SINE MIR 116 216 -46 2439 92 0 0 chr17 62479463 62479767 -27024786 - AluSq SINE Alu -9 304 1 204 67 0 0 chr17 62480443 62480473 -27024080 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2449 81 0 0 chr17 62480477 62480773 -27023780 - AluSq SINE Alu -17 296 1 815 272 60 16 chr17 62482944 62483007 -27021546 - MIR SINE MIR 0 262 203 2339 119 0 0 chr17 62483007 62483319 -27021234 - AluSx SINE Alu 0 312 1 815 272 60 16 chr17 62483319 62483505 -27021048 - MIR SINE MIR -59 203 2 198 0 0 0 chr17 62484696 62484718 -27019835 + (T)n Simple_repeat Simple_repeat 1 22 0 2086 110 3 7 chr17 62485248 62485550 -27019003 - AluSx SINE Alu 0 301 1 1285 231 165 32 chr17 62485938 62486470 -27018083 - L1MD2 LINE L1 0 6359 5757 193 250 25 0 chr17 62486622 62486662 -27017891 - L2 LINE L2 -6 3307 3267 243 209 151 58 chr17 62486789 62486875 -27017678 - MIR SINE MIR -122 140 47 213 308 39 13 chr17 62486949 62487027 -27017526 + MIR3 SINE MIR 122 201 -7 376 195 58 11 chr17 62487581 62487668 -27016885 + L3 LINE CR1 1484 1574 -3 183 325 83 42 chr17 62489496 62489616 -27014937 + MIR SINE MIR 24 148 -60 443 217 24 38 chr17 62489821 62489947 -27014606 + MIR SINE MIR 19 145 -63 774 150 0 15 chr17 62489955 62490088 -27014465 + FLAM_A SINE Alu 1 131 -2 23 0 0 0 chr17 62490088 62490111 -27014442 + AT_rich Low_complexity Low_complexity 1 23 0 489 115 0 11 chr17 62490594 62490681 -27013872 + L1MB3 LINE L1 6096 6181 -2 2082 118 7 36 chr17 62490704 62491010 -27013543 - AluSx SINE Alu -15 297 1 450 162 54 9 chr17 62491754 62491865 -27012688 - MER5B DNA MER1_type 0 178 63 397 261 154 0 chr17 62492688 62492818 -27011735 - MIR3 SINE MIR -34 174 25 2315 98 3 3 chr17 62493095 62493392 -27011161 - AluSx SINE Alu -15 297 1 946 231 46 28 chr17 62494014 62494296 -27010257 - MLT1H LTR MaLR -210 339 53 626 187 121 48 chr17 62494863 62495029 -27009524 + MER5A DNA MER1_type 12 189 0 1816 169 0 14 chr17 62495251 62495541 -27009012 - AluJo SINE Alu -26 286 1 2360 109 7 0 chr17 62495898 62496202 -27008351 + AluSg SINE Alu 1 306 -4 477 0 0 0 chr17 62496310 62496363 -27008190 + (TG)n Simple_repeat Simple_repeat 1 53 0 207 125 0 0 chr17 62496365 62496405 -27008148 + (GA)n Simple_repeat Simple_repeat 2 41 0 2627 91 40 0 chr17 62498469 62498844 -27005709 - MLT1B LTR MaLR 0 390 1 583 308 83 45 chr17 62498873 62499107 -27005446 + L1ME4a LINE L1 5729 5984 -137 2046 143 3 3 chr17 62499107 62499401 -27005152 + AluJb SINE Alu 1 294 -18 583 308 83 45 chr17 62499401 62499540 -27005013 + L1ME4a LINE L1 5984 6116 -5 219 245 39 88 chr17 62499720 62499822 -27004731 - L3 LINE CR1 -896 681 585 510 215 9 9 chr17 62501180 62501287 -27003266 + MIR SINE MIR 84 190 -72 216 375 0 0 chr17 62503383 62503463 -27001090 + MIR3 SINE MIR 94 173 -35 484 277 154 1 chr17 62503557 62503899 -27000654 - LTR16A LTR ERVL 0 450 23 298 290 50 5 chr17 62504065 62504176 -27000377 - MIR SINE MIR -97 111 1 2127 114 45 0 chr17 62504404 62504693 -26999860 + AluSq SINE Alu 1 302 -11 368 259 126 22 chr17 62507077 62507212 -26997341 - MIR SINE MIR -21 241 93 511 282 35 35 chr17 62508059 62508233 -26996320 - MIR3 SINE MIR -3 205 32 2367 91 0 3 chr17 62508463 62508760 -26995793 - AluSq SINE Alu -17 296 1 208 264 0 0 chr17 62509259 62509312 -26995241 - L2 LINE L2 -13 3259 3207 317 332 174 13 chr17 62509513 62509811 -26994742 - L2 LINE L2 -339 2975 2630 251 212 129 24 chr17 62511632 62511717 -26992836 - MER103 DNA DNA -55 111 18 268 303 112 71 chr17 62512231 62512498 -26992055 - L2 LINE L2 -45 3227 2950 435 200 191 0 chr17 62513179 62513284 -26991269 + MIR SINE MIR 16 140 -122 1258 196 156 38 chr17 62513288 62513768 -26990785 + LTR50 LTR ERVL 24 677 -118 500 211 272 7 chr17 62513768 62513915 -26990638 + MER5A DNA MER1_type 1 186 -3 1258 196 156 38 chr17 62513915 62514027 -26990526 + LTR50 LTR ERVL 677 774 -21 383 113 16 0 chr17 62514029 62514091 -26990462 - MER41B LTR ERV1 -93 542 480 184 319 57 43 chr17 62514273 62514414 -26990139 - L3b LINE CR1 -118 1465 1323 349 327 105 0 chr17 62514597 62514750 -26989803 - MIR3 SINE MIR -4 204 36 1810 140 57 4 chr17 62517035 62517314 -26987239 + AluSx SINE Alu 1 294 -18 215 296 264 25 chr17 62517372 62517531 -26987022 + MIR SINE MIR 47 243 -19 288 308 15 54 chr17 62518018 62518148 -26986405 + L2 LINE L2 37 161 -3153 332 299 134 8 chr17 62518260 62518394 -26986159 + L2 LINE L2 3163 3313 0 180 286 43 57 chr17 62518557 62518627 -26985926 + L3 LINE CR1 1506 1574 -3 504 0 0 0 chr17 62520096 62520152 -26984401 + (CA)n Simple_repeat Simple_repeat 2 57 0 424 313 37 46 chr17 62520412 62520606 -26983947 + MIR SINE MIR 30 223 -39 597 230 24 70 chr17 62520618 62520831 -26983722 + MLT1J2 LTR MaLR 248 450 0 2086 128 7 10 chr17 62522282 62522587 -26981966 + AluSx SINE Alu 7 310 -2 1369 157 9 0 chr17 62522686 62522902 -26981651 + MER20 DNA MER1_type 2 219 0 414 276 100 29 chr17 62522905 62523075 -26981478 + MIR SINE MIR 34 215 -47 2323 98 13 0 chr17 62524108 62524414 -26980139 + AluSq SINE Alu 1 310 -3 565 332 31 18 chr17 62524527 62524756 -26979797 - MIR SINE MIR 0 262 31 282 116 0 0 chr17 62525390 62525433 -26979120 + (TCCCC)n Simple_repeat Simple_repeat 3 45 0 269 269 15 127 chr17 62525595 62525792 -26978761 + MIR SINE MIR 73 247 -15 1179 67 67 0 chr17 62525792 62525942 -26978611 + AluSq SINE Alu 76 235 -78 454 253 19 25 chr17 62526678 62526836 -26977717 - MER45A DNA AcHobo -21 157 1 432 0 0 0 chr17 62528333 62528381 -26976172 + (TG)n Simple_repeat Simple_repeat 2 49 0 1007 285 139 27 chr17 62528386 62529286 -26975267 + L2 LINE L2 2279 3288 -25 198 157 29 14 chr17 62531984 62532054 -26972499 + (CA)n Simple_repeat Simple_repeat 2 72 0 181 364 71 20 chr17 62533400 62533450 -26971103 - L3 LINE CR1 -7 1570 1524 708 243 30 18 chr17 62533450 62533619 -26970934 - MER5B DNA MER1_type -4 174 4 181 364 71 20 chr17 62533619 62533667 -26970886 - L3 LINE CR1 -53 1524 1467 243 0 0 0 chr17 62534942 62534969 -26969584 + (TC)n Simple_repeat Simple_repeat 2 28 0 1323 210 101 54 chr17 62535232 62535656 -26968897 - MLT1C LTR MaLR -2 465 22 302 148 37 0 chr17 62535663 62535717 -26968836 - MLT1C LTR MaLR -334 56 1 544 310 73 20 chr17 62535863 62536108 -26968445 - MIR SINE MIR 0 262 5 1635 113 9 0 chr17 62536489 62536710 -26967843 - AluSx SINE Alu -89 223 1 605 76 0 33 chr17 62536856 62536948 -26967605 + AluSg/x SINE Alu 217 305 -4 783 231 157 0 chr17 62537087 62537303 -26967250 - MIR SINE MIR -4 258 9 227 347 84 11 chr17 62537633 62537728 -26966825 - MIR SINE MIR -159 103 2 2394 91 0 0 chr17 62541496 62541793 -26962760 - AluSq SINE Alu -10 303 7 1967 164 0 3 chr17 62541816 62542115 -26962438 - AluJb SINE Alu -14 298 1 2622 57 0 0 chr17 62542391 62542692 -26961861 - AluY SINE Alu -10 301 1 2618 39 7 7 chr17 62543226 62543534 -26961019 + AluY SINE Alu 1 308 -3 435 245 94 9 chr17 62543690 62543796 -26960757 - L2 LINE L2 0 3272 3158 310 302 32 63 chr17 62543842 62543968 -26960585 + L2 LINE L2 3151 3272 0 2169 124 10 0 chr17 62544036 62544335 -26960218 + AluSx SINE Alu 1 302 -10 441 278 238 54 chr17 62544414 62544893 -26959660 + L3 LINE CR1 905 1471 -106 301 277 139 0 chr17 62547326 62547427 -26957126 - MIR SINE MIR -35 227 113 199 347 28 0 chr17 62547421 62547493 -26957060 - MIR3 SINE MIR -121 87 14 * 477 240 52 74 chr17 62548521 62548567 -26955986 - MIR SINE MIR -63 145 100 2475 91 0 0 chr17 62548567 62548875 -26955678 - AluSx SINE Alu -4 308 1 477 240 52 74 chr17 62548875 62549018 -26955535 - MIR SINE MIR -108 100 27 2683 180 55 22 chr17 62549813 62550580 -26953973 - Charlie7 DNA MER1_type -5 2607 1765 613 272 138 30 chr17 62550624 62550995 -26953558 - Charlie7 DNA MER1_type -2087 525 115 1666 159 76 21 chr17 62551047 62551336 -26953217 - AluJo SINE Alu -7 305 1 458 277 129 19 chr17 62551345 62551500 -26953053 - MER5B DNA MER1_type -6 172 1 436 218 271 0 chr17 62551515 62551648 -26952905 - MER5A DNA MER1_type -7 182 14 2067 118 14 10 chr17 62552395 62552683 -26951870 - AluSx SINE Alu -23 289 1 478 299 8 8 chr17 62552992 62553119 -26951434 - MIR SINE MIR -122 140 14 791 160 0 15 chr17 62554297 62554428 -26950125 + FLAM_C SINE Alu 5 133 0 380 244 107 36 chr17 62554548 62554716 -26949837 - MER5A DNA MER1_type -9 180 1 192 277 12 60 chr17 62556454 62556537 -26948016 + MIR SINE MIR 117 195 -67 216 313 62 27 chr17 62558278 62558390 -26946163 + MIR SINE MIR 33 148 -114 650 211 217 62 chr17 62558392 62558562 -26945991 + L1MC4 LINE L1 7689 7831 -211 2370 82 0 3 chr17 62558562 62558856 -26945697 + AluSg SINE Alu 1 293 -17 650 211 217 62 chr17 62558856 62558989 -26945564 + L1MC4 LINE L1 7831 8039 -3 696 228 105 74 chr17 62559906 62560363 -26944190 + MLT1F LTR MaLR 66 536 -6 219 326 70 12 chr17 62560636 62560722 -26943831 + L2 LINE L2 3182 3272 -41 286 136 0 0 chr17 62561722 62561766 -26942787 + MER81 DNA DNA 8 51 -63 336 264 75 9 chr17 62561905 62562011 -26942542 - L1ME LINE L1 -468 5653 5541 2272 127 0 6 chr17 62562429 62562743 -26941810 - AluSx SINE Alu 0 312 1 2056 128 3 13 chr17 62563515 62563821 -26940732 - AluJb SINE Alu -9 303 1 186 133 0 0 chr17 62563991 62564021 -26940532 + (TTA)n Simple_repeat Simple_repeat 2 31 0 386 224 143 21 chr17 62564502 62564647 -26939906 + MIR SINE MIR 27 187 -62 318 115 0 0 chr17 62564647 62564699 -26939854 + (TG)n Simple_repeat Simple_repeat 2 53 0 234 314 72 34 chr17 62565587 62565823 -26938730 + L1M4 LINE L1 4532 4776 -1370 21 0 0 0 chr17 62565951 62565972 -26938581 + AT_rich Low_complexity Low_complexity 1 21 0 957 175 48 87 chr17 62566051 62566179 -26938374 + AluJo SINE Alu 1 132 -180 2144 127 0 0 chr17 62566179 62566492 -26938061 + AluSx SINE Alu 1 313 0 1522 182 45 22 chr17 62566498 62566811 -26937742 + 7SLRNA srpRNA srpRNA 1 320 0 957 175 48 87 chr17 62566811 62566903 -26937650 + AluJo SINE Alu 137 220 -92 2582 55 0 0 chr17 62566938 62567231 -26937322 - AluSc SINE Alu -15 294 2 23 54 0 0 chr17 62567242 62567279 -26937274 + AT_rich Low_complexity Low_complexity 1 37 0 270 291 90 62 chr17 62567660 62567904 -26936649 - L2 LINE L2 -26 3246 2996 428 258 161 15 chr17 62568511 62568678 -26935875 + MIR SINE MIR 3 190 -72 510 208 35 81 chr17 62568705 62568878 -26935675 - MER104 DNA Tc2 -3 177 13 690 139 62 62 chr17 62569823 62569967 -26934586 - L2 LINE L2 0 3313 3170 2058 116 34 3 chr17 62570320 62570614 -26933939 + AluSx SINE Alu 7 309 -3 183 260 73 83 chr17 62570731 62570827 -26933726 - L3b LINE CR1 -321 1262 1168 578 201 49 49 chr17 62571288 62571452 -26933101 + MER3 DNA MER1_type 1 164 -45 1817 157 44 3 chr17 62573267 62573605 -26930948 - MLT1A1 LTR MaLR -13 352 1 269 224 92 13 chr17 62573608 62573684 -26930869 - MIR3 SINE MIR -112 96 15 400 226 44 15 chr17 62574082 62574219 -26930334 - LTR67 LTR ERVL -7 550 410 295 328 39 16 chr17 62576883 62577011 -26927542 + MIR3 SINE MIR 43 173 -35 205 244 39 110 chr17 62577310 62577437 -26927116 - MIR SINE MIR -106 156 39 473 225 81 29 chr17 62577484 62577537 -26927016 - MER3 DNA MER1_type -13 196 147 2345 114 0 0 chr17 62577537 62577845 -26926708 + AluSx SINE Alu 1 308 -4 473 225 81 29 chr17 62577845 62577964 -26926589 - MER3 DNA MER1_type -62 147 15 304 294 206 5 chr17 62582027 62582211 -26922342 + MIR SINE MIR 34 254 -8 2237 124 0 3 chr17 62582573 62582879 -26921674 + AluSx SINE Alu 1 305 -7 238 311 29 19 chr17 62582925 62583028 -26921525 - L2 LINE L2 -228 3044 2941 1326 274 133 2 chr17 62583073 62583500 -26921053 - MLT1J LTR MaLR -28 483 1 342 328 30 0 chr17 62584130 62584264 -26920289 + MER117 DNA MER1_type 1 138 -59 196 279 44 29 chr17 62585762 62585830 -26918723 + L2 LINE L2 3241 3309 -4 296 194 69 0 chr17 62586032 62586104 -26918449 + MIR SINE MIR 110 186 -76 237 281 98 33 chr17 62586879 62586933 -26917620 - L2 LINE L2 -183 3089 3040 1975 158 11 27 chr17 62586933 62586998 -26917555 - MLT1A1 LTR MaLR -3 362 297 1880 157 0 39 chr17 62586998 62587310 -26917243 + AluJo SINE Alu 1 300 -12 1975 158 11 27 chr17 62587310 62587611 -26916942 - MLT1A1 LTR MaLR -68 297 2 237 281 98 33 chr17 62587611 62587709 -26916844 - L2 LINE L2 -232 3040 2927 250 292 56 0 chr17 62588304 62588376 -26916177 - L2 LINE L2 -9 3263 3188 497 271 32 60 chr17 62588871 62589089 -26915464 - MIR SINE MIR 0 262 51 320 299 132 0 chr17 62589105 62589249 -26915304 + MIR SINE MIR 100 262 0 210 232 0 18 chr17 62589280 62589336 -26915217 - MIR3 SINE MIR -45 163 109 416 225 45 0 chr17 62591056 62591145 -26913408 + L2 LINE L2 3199 3291 -22 614 269 30 0 chr17 62591388 62591555 -26912998 + MER5B DNA MER1_type 1 172 -6 244 310 145 14 chr17 62593227 62593372 -26911181 - MIR3 SINE MIR -25 183 20 297 267 114 9 chr17 62593497 62593602 -26910951 - MER5B DNA MER1_type 0 178 63 724 200 11 72 chr17 62593770 62593812 -26910741 + MER5B DNA MER1_type 7 50 -128 1944 124 46 26 chr17 62593812 62594118 -26910435 - AluSx SINE Alu 0 312 1 724 200 11 72 chr17 62594118 62594255 -26910298 + MER5B DNA MER1_type 50 175 -3 224 379 86 17 chr17 62594488 62594662 -26909891 - L2 LINE L2 -10 3262 3077 364 303 67 28 chr17 62594901 62595079 -26909474 - MIR3 SINE MIR -17 191 7 2063 133 0 60 chr17 62595537 62595869 -26908684 + AluSx SINE Alu 1 312 0 2407 99 10 0 chr17 62596029 62596332 -26908221 - AluSx SINE Alu -6 306 1 1890 130 45 0 chr17 62596338 62596523 -26908030 - AluSx SINE Alu 0 315 111 453 19 0 0 chr17 62596523 62596577 -26907976 + (TG)n Simple_repeat Simple_repeat 2 55 0 1890 130 45 0 chr17 62596577 62596694 -26907859 - AluSx SINE Alu -204 111 1 652 203 189 14 chr17 62596701 62596913 -26907640 - MIR SINE MIR -12 250 2 310 198 63 0 chr17 62597520 62597764 -26906789 + (CA)n Simple_repeat Simple_repeat 1 259 0 386 146 49 24 chr17 62597817 62597981 -26906572 + (CA)n Simple_repeat Simple_repeat 2 169 0 22 0 0 0 chr17 62601878 62601900 -26902653 + GC_rich Low_complexity Low_complexity 1 22 0 187 371 30 30 chr17 62603117 62603249 -26901304 - L2 LINE L2 -7 3265 3134 1273 174 62 112 chr17 62607435 62607447 -26897106 - AluJo SINE Alu -7 305 294 246 32 0 0 chr17 62607447 62607478 -26897075 + (TTGG)n Simple_repeat Simple_repeat 1 31 0 1273 174 62 112 chr17 62607478 62607786 -26896767 - AluJo SINE Alu -18 294 1 234 342 13 0 chr17 62607908 62607984 -26896569 - MIR SINE MIR -131 131 55 23 0 0 0 chr17 62608122 62608145 -26896408 + AT_rich Low_complexity Low_complexity 1 23 0 225 280 0 0 chr17 62608580 62608630 -26895923 - MLT1L LTR MaLR -221 394 345 260 322 157 20 chr17 62609004 62609259 -26895294 - L2 LINE L2 -174 3098 2809 25 0 0 0 chr17 62610519 62610544 -26894009 + AT_rich Low_complexity Low_complexity 1 25 0 502 291 159 14 chr17 62610779 62610999 -26893554 - MIR SINE MIR 0 262 11 205 336 31 5 chr17 62612422 62612531 -26892022 + MIR3 SINE MIR 15 185 -23 2319 111 3 0 chr17 62612627 62612934 -26891619 + AluSx SINE Alu 1 308 -4 406 286 19 0 chr17 62613260 62613365 -26891188 + MER5B DNA MER1_type 12 118 -60 344 310 109 22 chr17 62614587 62614816 -26889737 + MIR SINE MIR 8 256 -6 1970 112 0 0 chr17 62616307 62616557 -26887996 + AluSx SINE Alu 1 250 -62 279 321 93 12 chr17 62618847 62619009 -26885544 - L3b LINE CR1 -107 1476 1302 283 234 88 65 chr17 62619265 62619454 -26885099 - MIR3 SINE MIR -63 145 3 198 0 0 0 chr17 62622994 62623016 -26881537 + (TC)n Simple_repeat Simple_repeat 2 23 0 233 338 110 24 chr17 62623704 62623873 -26880680 + MIR SINE MIR 2 186 -67 384 209 0 0 chr17 62624603 62624694 -26879859 + (CA)n Simple_repeat Simple_repeat 1 91 0 198 103 0 0 chr17 62627058 62627087 -26877466 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 180 0 0 0 chr17 62628153 62628173 -26876380 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 22 0 0 0 chr17 62629388 62629410 -26875143 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr17 62629619 62629651 -26874902 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr17 62629759 62629781 -26874772 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr17 62630013 62630037 -26874516 + AT_rich Low_complexity Low_complexity 1 24 0 214 195 0 0 chr17 62630082 62630123 -26874430 + T-rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr17 62630202 62630223 -26874330 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr17 62630779 62630803 -26873750 + AT_rich Low_complexity Low_complexity 1 24 0 205 88 29 0 chr17 62631672 62631706 -26872847 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 218 79 0 26 chr17 62632814 62632852 -26871701 + (TA)n Simple_repeat Simple_repeat 1 37 0 25 0 0 0 chr17 62633041 62633066 -26871487 + AT_rich Low_complexity Low_complexity 1 25 0 310 148 16 33 chr17 62633921 62633982 -26870571 - U7 snRNA snRNA -2 61 2 197 290 130 0 chr17 62634440 62634509 -26870044 - MIR SINE MIR -88 120 43 1133 323 159 31 chr17 62634696 62635829 -26868724 + L1ME4a LINE L1 2114 3348 -2867 471 309 124 28 chr17 62635837 62636745 -26867808 + L1ME4a LINE L1 3397 4392 -1823 305 323 92 48 chr17 62636777 62637071 -26867482 + L1ME4a LINE L1 5727 6033 -157 280 77 0 0 chr17 62637568 62637615 -26866938 - L1PA6 LINE L1 -1 6153 6108 5709 200 64 74 chr17 62637925 62638723 -26865830 - L1ME1 LINE L1 -8 6953 6148 1561 179 0 28 chr17 62638723 62639008 -26865545 + AluJb SINE Alu 5 281 -31 5709 200 64 74 chr17 62639008 62640807 -26863746 - L1ME1 LINE L1 -813 6148 4356 1732 245 81 45 chr17 62640827 62641105 -26863448 - L1ME1 LINE L1 -4527 2595 2329 216 0 0 0 chr17 62641105 62641129 -26863424 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1732 245 81 45 chr17 62641129 62641569 -26862984 - L1ME1 LINE L1 -4793 2329 1906 1597 144 19 8 chr17 62641569 62641833 -26862720 - AluSg SINE Alu -8 302 36 1732 245 81 45 chr17 62641833 62642237 -26862316 - L1ME1 LINE L1 -5216 1906 1226 1945 181 0 12 chr17 62642238 62642574 -26861979 + MER58B DNA MER1_type 2 333 -8 915 187 57 38 chr17 62642576 62642785 -26861768 - L1ME1 LINE L1 -5200 1223 1011 527 283 41 0 chr17 62643430 62643575 -26860978 - MIR3 SINE MIR -1 207 57 263 238 62 25 chr17 62643972 62644052 -26860501 - LTR33A LTR ERVL 0 523 441 1608 194 35 62 chr17 62644096 62644497 -26860056 - MLT1B LTR MaLR 0 390 1 362 200 426 10 chr17 62644510 62644705 -26859848 - LTR50 LTR ERVL -496 299 24 1542 180 19 16 chr17 62644848 62645159 -26859394 + AluJo SINE Alu 1 312 0 189 0 0 0 chr17 62645534 62645555 -26858998 + (CA)n Simple_repeat Simple_repeat 2 22 0 264 222 26 52 chr17 62645586 62645739 -26858814 + (CTCA)n Simple_repeat Simple_repeat 4 152 0 2153 146 30 25 chr17 62645942 62646304 -26858249 - THE1B LTR MaLR 0 364 1 441 0 0 0 chr17 62647283 62647332 -26857221 + (TG)n Simple_repeat Simple_repeat 1 49 0 279 0 0 0 chr17 62647405 62647436 -26857117 + (GA)n Simple_repeat Simple_repeat 1 31 0 279 0 0 0 chr17 62647435 62647466 -26857087 + (TG)n Simple_repeat Simple_repeat 1 31 0 315 0 0 0 chr17 62647539 62647574 -26856979 + (GA)n Simple_repeat Simple_repeat 1 35 0 189 0 0 0 chr17 62647573 62647594 -26856959 + (TG)n Simple_repeat Simple_repeat 1 21 0 * 2339 74 3 0 chr17 62649011 62649308 -26855245 + AluSq SINE Alu 1 298 -15 2103 166 8 16 chr17 62649651 62650019 -26854534 + MLT1A1 LTR MaLR 1 365 0 1993 121 3 3 chr17 62650131 62650428 -26854125 + AluSx SINE Alu 1 297 -15 2201 106 0 0 chr17 62650947 62651249 -26853304 + AluSx SINE Alu 1 302 -10 368 230 0 0 chr17 62651425 62651499 -26853054 - MER20B DNA MER1_type -427 356 283 789 146 8 8 chr17 62651506 62651636 -26852917 - AluJb SINE Alu -178 134 5 322 308 10 0 chr17 62651641 62651745 -26852808 - MER20B DNA MER1_type -488 295 191 2616 223 82 26 chr17 62651948 62652469 -26852084 + MER20B DNA MER1_type 38 611 -172 1980 135 20 0 chr17 62652469 62652772 -26851781 + AluJb SINE Alu 1 309 -3 2616 223 82 26 chr17 62652772 62652954 -26851599 + MER20B DNA MER1_type 611 781 -2 2220 85 3 0 chr17 62653456 62653749 -26850804 + AluSp SINE Alu 1 294 -19 236 283 0 0 chr17 62655752 62655812 -26848741 + L2 LINE L2 3254 3313 0 199 222 0 56 chr17 62656044 62656098 -26848455 + MIR SINE MIR 103 153 -109 503 332 58 49 chr17 62656856 62657266 -26847287 + L2 LINE L2 2851 3264 -8 2223 145 43 32 chr17 62657371 62657834 -26846719 - L1MB8 LINE L1 0 6178 5711 1171 236 54 30 chr17 62657860 62658285 -26846268 - L1MC4 LINE L1 0 8042 7525 2705 83 14 0 chr17 62658285 62658646 -26845907 + THE1C LTR MaLR 1 366 -9 3952 223 60 24 chr17 62658646 62659669 -26844884 - L1MC4 LINE L1 -514 7528 6470 1827 256 131 51 chr17 62660133 62661220 -26843333 - L1MC5 LINE L1 -531 7430 6280 450 319 42 16 chr17 62661654 62661845 -26842708 - MLT1J LTR MaLR -165 346 151 283 302 81 0 chr17 62662375 62662461 -26842092 + MIR SINE MIR 93 185 -77 966 135 0 0 chr17 62662471 62662612 -26841941 + AluJo SINE Alu 1 141 -171 23 33 0 0 chr17 62662656 62662686 -26841867 + AT_rich Low_complexity Low_complexity 1 30 0 225 307 11 68 chr17 62663013 62663101 -26841452 + MIR SINE MIR 36 118 -90 278 283 30 0 chr17 62663757 62663872 -26840681 - MIR3 SINE MIR -46 162 44 230 275 0 69 chr17 62664588 62664719 -26839834 + C-rich Low_complexity Low_complexity 1 122 0 317 279 23 0 chr17 62664995 62665081 -26839472 - MIR SINE MIR -140 122 35 228 319 102 25 chr17 62666249 62666484 -26838069 + L1ME LINE L1 5631 5883 -238 1936 102 7 24 chr17 62666494 62666788 -26837765 + AluSx SINE Alu 1 289 -23 21 36 0 0 chr17 62666924 62666952 -26837601 + AT_rich Low_complexity Low_complexity 1 28 0 244 228 13 13 chr17 62667117 62667196 -26837357 + GA-rich Low_complexity Low_complexity 4 82 0 1391 289 168 26 chr17 62667324 62668022 -26836531 + L3 LINE CR1 117 913 -664 1489 137 67 16 chr17 62668119 62668374 -26836179 - AluJo SINE Alu -16 296 29 398 211 142 41 chr17 62668399 62668536 -26836017 - AluJo SINE Alu -109 193 87 290 272 5 141 chr17 62668555 62668739 -26835814 - MIR SINE MIR -83 179 21 607 293 85 23 chr17 62668741 62669148 -26835405 + MLT1L LTR MaLR 115 583 -32 187 123 0 185 chr17 62669550 62669615 -26834938 - L2 LINE L2 0 3313 3261 1210 177 18 26 chr17 62669629 62669794 -26834759 - MER58A DNA MER1_type -2196 224 60 1813 130 108 3 chr17 62669794 62670101 -26834452 - MER44D DNA MER2_type 0 609 1 1210 177 18 26 chr17 62670101 62670161 -26834392 - MER58A DNA MER1_type -2360 60 1 516 294 8 0 chr17 62670359 62670478 -26834075 - L2 LINE L2 -1 3312 3193 376 318 144 42 chr17 62670498 62670907 -26833646 + L2 LINE L2 2809 3259 -13 360 0 0 0 chr17 62670907 62670947 -26833606 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 207 250 0 0 chr17 62671633 62671677 -26832876 - MIR SINE MIR -102 160 117 530 260 145 26 chr17 62672883 62673110 -26831443 - MIR SINE MIR -1 261 8 366 151 27 0 chr17 62673718 62673791 -26830762 + AluJ/FRAM SINE Alu 228 302 0 2144 108 3 0 chr17 62673793 62674098 -26830455 + AluSp SINE Alu 2 307 -6 1853 159 199 2 chr17 62674099 62674521 -26830032 - L1MCa LINE L1 -5876 550 46 206 338 93 29 chr17 62674579 62674718 -26829835 - MIR SINE MIR -12 250 103 263 189 108 14 chr17 62675758 62675832 -26828721 - MIR SINE MIR -95 113 33 212 238 0 0 chr17 62676062 62676104 -26828449 + GA-rich Low_complexity Low_complexity 4 45 0 466 304 24 0 chr17 62677380 62677548 -26827005 + MER5B DNA MER1_type 5 176 -2 623 238 40 96 chr17 62677760 62678009 -26826544 - MIR SINE MIR 0 262 22 234 0 0 0 chr17 62680264 62680290 -26824263 + (CA)n Simple_repeat Simple_repeat 2 27 0 221 300 0 0 chr17 62680321 62680371 -26824182 + MIR SINE MIR 103 152 -110 269 189 85 123 chr17 62680386 62680467 -26824086 + MIR SINE MIR 31 109 -153 1223 234 169 33 chr17 62680467 62680946 -26823607 - MLT1H LTR MaLR -4 545 2 269 189 85 123 chr17 62680946 62680970 -26823583 + MIR SINE MIR 109 132 -130 2469 185 30 39 chr17 62680971 62681014 -26823539 - L1MB5 LINE L1 0 6174 6132 2377 103 7 0 chr17 62681014 62681324 -26823229 - AluSx SINE Alu 0 312 1 2469 185 30 39 chr17 62681324 62681874 -26822679 - L1MB5 LINE L1 -42 6132 5586 180 274 131 36 chr17 62681996 62682080 -26822473 - L2 LINE L2 -1 3271 3180 195 217 0 22 chr17 62682120 62682166 -26822387 + MIR3 SINE MIR 156 200 -8 2167 113 3 0 chr17 62682891 62683197 -26821356 - AluSx SINE Alu 0 307 1 355 228 0 73 chr17 62683210 62683333 -26821220 - MIR SINE MIR -42 220 107 318 115 0 0 chr17 62683420 62683472 -26821081 + (CA)n Simple_repeat Simple_repeat 1 52 0 411 320 41 0 chr17 62683809 62683931 -26820622 + MIR3 SINE MIR 77 203 -5 200 286 316 0 chr17 62684052 62684150 -26820403 + MIR3 SINE MIR 34 162 -46 349 275 58 42 chr17 62684152 62684341 -26820212 + MER117 DNA MER1_type 6 197 0 203 88 29 0 chr17 62685147 62685181 -26819372 + (GA)n Simple_repeat Simple_repeat 2 36 0 245 330 0 0 chr17 62685536 62685624 -26818929 - MIR SINE MIR -58 204 117 829 191 90 11 chr17 62685633 62685811 -26818742 - MER3 DNA MER1_type -17 192 1 2059 146 0 7 chr17 62686541 62686842 -26817711 - AluSx SINE Alu -13 299 1 2778 181 51 9 chr17 62686851 62687618 -26816935 - L1M4 LINE L1 -363 5821 5013 307 279 40 104 chr17 62687979 62688180 -26816373 - MIR SINE MIR -54 208 21 1822 177 3 0 chr17 62689171 62689490 -26815063 - AluJo SINE Alu 0 320 1 423 303 9 0 chr17 62689876 62689985 -26814568 + MER81 DNA DNA 4 113 -1 565 170 170 88 chr17 62690533 62690673 -26813880 - MSTD LTR MaLR -199 197 37 2209 117 0 0 chr17 62690673 62690972 -26813581 + AluSx SINE Alu 1 299 -13 565 170 170 88 chr17 62690972 62691013 -26813540 - MSTD LTR MaLR -359 37 1 2059 112 39 0 chr17 62691153 62691439 -26813114 + AluSx SINE Alu 1 297 -15 2127 119 3 31 chr17 62691441 62691761 -26812792 + AluSx SINE Alu 1 311 -1 335 263 43 64 chr17 62692237 62692428 -26812125 + MIR SINE MIR 15 203 -59 281 297 138 14 chr17 62694017 62694162 -26810391 + MIR3 SINE MIR 32 194 -14 278 278 205 26 chr17 62694531 62694682 -26809871 + L2 LINE L2 2245 2422 -892 1392 203 92 55 chr17 62694721 62695101 -26809452 + MSTD LTR MaLR 1 394 -2 361 298 74 8 chr17 62695167 62695288 -26809265 + MIR SINE MIR 25 153 -109 718 184 71 48 chr17 62695301 62695469 -26809084 + MER63A DNA MER1_type 32 203 -7 321 307 173 13 chr17 62695691 62695841 -26808712 + MIR3 SINE MIR 3 176 -32 251 311 48 19 chr17 62695936 62696039 -26808514 + L2 LINE L2 3143 3248 -24 191 219 0 0 chr17 62696243 62696284 -26808269 + L2 LINE L2 3265 3305 -8 288 77 0 0 chr17 62696328 62696367 -26808186 + (TC)n Simple_repeat Simple_repeat 2 40 0 589 263 118 30 chr17 62697186 62697456 -26807097 - MLT1L LTR MaLR -321 294 1 1994 90 101 4 chr17 62697589 62697866 -26806687 + AluY SINE Alu 1 304 -7 189 0 0 0 chr17 62697906 62697927 -26806626 + (A)n Simple_repeat Simple_repeat 1 21 0 720 191 0 0 chr17 62698133 62698311 -26806242 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 213 94 0 0 chr17 62698327 62698359 -26806194 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 451 236 224 50 chr17 62698370 62698790 -26805763 - L2 LINE L2 -17 3296 2804 216 97 0 0 chr17 62700956 62700987 -26803566 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 278 274 0 0 chr17 62700990 62701052 -26803501 - L2 LINE L2 -8 3264 3203 367 248 0 67 chr17 62701449 62701554 -26802999 - MER5A DNA MER1_type -7 182 85 893 160 0 0 chr17 62701579 62701710 -26802843 - FLAM_C SINE Alu -2 131 1 443 252 19 9 chr17 62701710 62701817 -26802736 + MER81 DNA DNA 7 114 0 703 294 106 47 chr17 62701822 62702400 -26802153 + MLT1L LTR MaLR 4 615 0 1190 139 11 21 chr17 62702473 62702660 -26801893 + MER5A DNA MER1_type 1 185 -4 413 299 59 37 chr17 62703163 62703290 -26801263 - Tigger8 DNA MER2_type -2 664 541 2450 83 0 13 chr17 62703290 62703603 -26800950 + AluSp SINE Alu 1 309 -4 413 299 59 37 chr17 62703603 62703746 -26800807 - Tigger8 DNA MER2_type -125 541 388 21 0 0 0 chr17 62703748 62703769 -26800784 + AT_rich Low_complexity Low_complexity 1 21 0 362 318 123 8 chr17 62703856 62704108 -26800445 - Tigger8 DNA MER2_type -295 371 91 2471 81 3 0 chr17 62704889 62705187 -26799366 - AluSp SINE Alu -2 311 13 268 271 52 117 chr17 62706459 62706705 -26797848 - MER102b DNA MER1_type -1089 339 120 2355 90 0 10 chr17 62706705 62707004 -26797549 + AluSg SINE Alu 1 296 -14 268 271 52 117 chr17 62707004 62707100 -26797453 - MER102b DNA MER1_type -1308 120 19 258 262 135 8 chr17 62707119 62707245 -26797308 - MIR3 SINE MIR -52 156 15 828 188 34 0 chr17 62707600 62707749 -26796804 + MIR SINE MIR 35 188 -74 373 194 14 0 chr17 62707763 62707835 -26796718 + AluJ/FRAM SINE Alu 224 296 -6 183 250 16 16 chr17 62707843 62707907 -26796646 + MIR SINE MIR 195 258 -4 192 288 54 90 chr17 62707956 62708067 -26796486 - MIR3 SINE MIR -4 204 98 1908 123 7 18 chr17 62708122 62708406 -26796147 - AluSx SINE Alu -12 300 20 480 286 70 6 chr17 62708904 62709075 -26795478 + MIR SINE MIR 7 188 -74 389 260 105 94 chr17 62709706 62709761 -26794792 - MIR SINE MIR -1 261 208 2339 103 13 0 chr17 62709761 62710063 -26794490 - AluSx SINE Alu -6 306 1 389 260 105 94 chr17 62710063 62710188 -26794365 - MIR SINE MIR -54 208 79 230 279 47 0 chr17 62711968 62712054 -26792499 + L1ME LINE L1 5452 5541 -625 1865 155 0 0 chr17 62712110 62712381 -26792172 + AluJb SINE Alu 1 271 -41 1636 101 0 0 chr17 62712387 62712596 -26791957 + AluSq SINE Alu 57 265 -48 189 74 0 0 chr17 62712596 62712623 -26791930 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 423 200 41 147 chr17 62712815 62712858 -26791695 + MIR SINE MIR 110 156 -106 2326 67 3 11 chr17 62712858 62713180 -26791373 - AluY SINE Alu 0 320 1 423 200 41 147 chr17 62713180 62713305 -26791248 + MIR SINE MIR 156 261 -1 195 368 35 0 chr17 62713956 62714043 -26790510 - MIR SINE MIR -119 143 54 467 203 78 0 chr17 62714059 62714212 -26790341 - MER33 DNA MER1_type 0 363 199 456 138 0 0 chr17 62714243 62714308 -26790245 + AluJo SINE Alu 63 127 -185 829 179 6 19 chr17 62714364 62714520 -26790033 + AluJo SINE Alu 120 273 -39 198 0 0 0 chr17 62714527 62714549 -26790004 + (GA)n Simple_repeat Simple_repeat 1 22 0 422 231 26 17 chr17 62714549 62714666 -26789887 - MER33 DNA MER1_type -184 140 23 413 239 82 0 chr17 62715251 62715376 -26789177 + MIR SINE MIR 31 163 -57 210 143 0 0 chr17 62715679 62715714 -26788839 + (TC)n Simple_repeat Simple_repeat 1 35 0 396 0 0 0 chr17 62715714 62715758 -26788795 + (TG)n Simple_repeat Simple_repeat 2 45 0 435 294 17 0 chr17 62716212 62716331 -26788222 - MIR3 SINE MIR -27 181 61 215 224 0 0 chr17 62718293 62718342 -26786211 + (ATG)n Simple_repeat Simple_repeat 3 51 0 527 283 101 23 chr17 62719115 62719312 -26785241 - MIR SINE MIR -31 231 17 337 355 32 34 chr17 62719429 62719668 -26784885 + L1MB5 LINE L1 5706 5940 -234 2158 108 6 44 chr17 62719871 62720186 -26784367 + AluSx SINE Alu 1 303 -9 633 234 102 78 chr17 62720248 62720771 -26783782 - MLT1H LTR MaLR 0 555 30 598 235 131 6 chr17 62723431 62723614 -26780939 + MLT1J2 LTR MaLR 21 227 -223 714 236 122 63 chr17 62725557 62725923 -26778630 - MLT1J LTR MaLR -53 458 1 487 306 78 57 chr17 62725936 62726181 -26778372 + MIR SINE MIR 12 261 -1 812 125 100 0 chr17 62726491 62726611 -26777942 + FLAM_C SINE Alu 1 132 -1 1011 249 32 0 chr17 62726733 62726950 -26777603 + MER58A DNA MER1_type 1 224 0 742 276 35 8 chr17 62727243 62727497 -26777056 + L1ME LINE L1 5520 5780 -341 1449 183 4 57 chr17 62727498 62727777 -26776776 + AluSx SINE Alu 1 264 -48 765 172 8 0 chr17 62727777 62727911 -26776642 + AluJb SINE Alu 174 308 -4 1885 160 28 6 chr17 62728236 62728561 -26775992 + MLT1A1 LTR MaLR 34 365 0 1957 127 40 30 chr17 62728896 62729196 -26775357 + AluSq SINE Alu 3 305 -8 334 322 21 38 chr17 62729528 62729732 -26774821 + MIR SINE MIR 45 248 -14 2250 82 36 0 chr17 62730858 62731139 -26773414 - AluSg SINE Alu -19 291 1 314 272 189 17 chr17 62732041 62732221 -26772332 + MIR SINE MIR 52 262 0 2779 252 99 34 chr17 62732504 62734081 -26770472 + L2 LINE L2 1621 3303 -10 2275 94 0 0 chr17 62734083 62734382 -26770171 + AluSx SINE Alu 1 299 -13 582 267 13 7 chr17 62735963 62736113 -26768440 + MIR SINE MIR 108 258 -4 511 261 142 0 chr17 62737182 62737393 -26767160 + L1ME4a LINE L1 5538 5778 -343 405 305 45 7 chr17 62737553 62737707 -26766846 + L1ME4a LINE L1 5961 6120 -1 1136 98 0 138 chr17 62737838 62738062 -26766491 + 7SK RNA RNA 1 193 0 488 202 57 89 chr17 62739061 62739254 -26765299 - L1MC5 LINE L1 -78 7883 7696 1978 113 3 0 chr17 62739254 62739569 -26764984 + AluSx SINE Alu 1 316 0 488 202 57 89 chr17 62739569 62739620 -26764933 - L1MC5 LINE L1 -265 7696 7645 186 43 0 0 chr17 62739622 62739645 -26764908 + (T)n Simple_repeat Simple_repeat 1 23 0 466 188 47 23 chr17 62739781 62739909 -26764644 - L1MC5 LINE L1 -301 7660 7530 396 316 46 20 chr17 62739991 62740143 -26764410 - L2 LINE L2 -1 3271 3116 2094 110 13 0 chr17 62740223 62740523 -26764030 - AluSg SINE Alu -6 304 1 4307 239 60 31 chr17 62740608 62740652 -26763901 + L1MEc LINE L1 808 849 -5366 2084 137 0 0 chr17 62740652 62740958 -26763595 + AluSx SINE Alu 1 306 -6 4307 239 60 31 chr17 62740958 62741615 -26762938 + L1MEc LINE L1 849 1486 -4729 1833 171 0 0 chr17 62741615 62741919 -26762634 + AluSx SINE Alu 1 304 -8 4307 239 60 31 chr17 62741919 62742193 -26762360 + L1MEc LINE L1 1486 1751 -4464 2317 66 3 10 chr17 62742193 62742497 -26762056 - AluY SINE Alu -9 302 1 4307 239 60 31 chr17 62742497 62742920 -26761633 + L1MEc LINE L1 1751 2235 -3980 2166 95 0 40 chr17 62742920 62743245 -26761308 + AluSq SINE Alu 1 312 -1 4307 239 60 31 chr17 62743245 62743582 -26760971 + L1MEc LINE L1 2235 2561 -3654 2373 237 102 13 chr17 62743588 62744369 -26760184 + L1M4 LINE L1 4205 5055 -1091 2129 115 6 6 chr17 62744467 62744779 -26759774 + AluSx SINE Alu 1 312 0 235 293 121 26 chr17 62744817 62744933 -26759620 + L3 LINE CR1 965 1091 -486 2012 210 63 9 chr17 62744948 62745409 -26759144 - L1ME3A LINE L1 -11 6159 5674 3831 222 66 30 chr17 62745409 62745770 -26758783 - L1ME3A LINE L1 -1268 4878 4531 1264 163 54 102 chr17 62745770 62745838 -26758715 - MLT1B LTR MaLR 0 390 320 2136 93 0 0 chr17 62745838 62746116 -26758437 + AluSx SINE Alu 1 278 -34 429 36 0 0 chr17 62746116 62746171 -26758382 + (TC)n Simple_repeat Simple_repeat 2 56 0 1264 163 54 102 chr17 62746171 62746511 -26758042 - MLT1B LTR MaLR -68 322 1 3831 222 66 30 chr17 62746511 62747136 -26757417 - L1ME3A LINE L1 -1615 4531 3843 1698 135 50 20 chr17 62747136 62747439 -26757114 - AluSx SINE Alu 0 312 1 3831 222 66 30 chr17 62747439 62747592 -26756961 - L1ME3A LINE L1 -2303 3843 3697 2195 151 31 18 chr17 62747592 62747975 -26756578 - Tigger2 DNA MER2_type 0 2718 2331 2173 64 7 10 chr17 62748037 62748355 -26756198 - AluY SINE Alu 0 311 1 326 167 56 0 chr17 62748376 62748448 -26756105 - L1ME3A LINE L1 -3643 2503 2428 29 0 0 0 chr17 62748521 62748550 -26756003 + AT_rich Low_complexity Low_complexity 1 29 0 2533 131 30 28 chr17 62748721 62749148 -26755405 + MSTA LTR MaLR 1 428 0 3774 164 51 14 chr17 62749148 62749838 -26754715 + MSTA-int LTR MaLR 1 715 -936 1892 120 18 7 chr17 62749838 62750113 -26754440 + MSTA LTR MaLR 151 428 0 214 372 78 39 chr17 62750171 62750480 -26754073 - L3 LINE CR1 -753 824 504 981 271 56 40 chr17 62750595 62751045 -26753508 + LTR16A1 LTR ERVL 1 457 0 1984 108 0 68 chr17 62752062 62752253 -26752300 - AluSg SINE Alu -7 303 141 2124 71 0 11 chr17 62752253 62752535 -26752018 - AluY SINE Alu -32 279 1 1984 108 0 68 chr17 62752535 62752668 -26751885 - AluSg SINE Alu -169 141 1 686 173 31 8 chr17 62752690 62752817 -26751736 - FRAM SINE Alu -23 153 24 492 274 110 34 chr17 62752991 62753277 -26751276 - L1ME4a LINE L1 -234 5887 5612 1380 208 0 27 chr17 62753278 62753571 -26750982 - AluJo SINE Alu -15 297 13 811 257 29 45 chr17 62753576 62753857 -26750696 - L1ME4a LINE L1 -544 5618 5353 2193 106 0 0 chr17 62753857 62754150 -26750403 + AluSx SINE Alu 1 293 -19 811 257 29 45 chr17 62754150 62754241 -26750312 - L1ME4a LINE L1 -809 5353 5262 362 312 50 63 chr17 62754515 62754736 -26749817 + L2 LINE L2 2959 3176 -96 751 188 0 8 chr17 62755186 62755314 -26749239 - FRAM SINE Alu -24 152 26 1925 168 21 96 chr17 62755629 62755902 -26748651 + MLT1D LTR MaLR 26 318 -187 2018 133 0 0 chr17 62755902 62756203 -26748350 + AluSx SINE Alu 1 301 -11 1925 168 21 96 chr17 62756203 62756391 -26748162 + MLT1D LTR MaLR 318 446 -59 2282 132 0 20 chr17 62756391 62756733 -26747820 + MER1B DNA MER1_type 3 337 0 1925 168 21 96 chr17 62756733 62756789 -26747764 + MLT1D LTR MaLR 446 505 0 1709 155 0 20 chr17 62756907 62757204 -26747349 + AluJo SINE Alu 1 291 -21 2764 147 9 9 chr17 62757205 62757669 -26746884 + L1PA16 LINE L1 5694 6157 -9 330 305 91 25 chr17 62757798 62757826 -26746727 - L1ME LINE L1 -394 5727 5702 1957 128 3 7 chr17 62757826 62758131 -26746422 + AluSx SINE Alu 1 304 -8 330 305 91 25 chr17 62758131 62758299 -26746254 - L1ME LINE L1 -419 5702 5518 234 0 0 0 chr17 62758565 62758591 -26745962 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 202 208 0 0 chr17 62758747 62758800 -26745753 + T-rich Low_complexity Low_complexity 2 54 0 280 275 0 22 chr17 62760445 62760536 -26744017 + MLT1K LTR MaLR 181 269 -319 1947 153 0 3 chr17 62760866 62761179 -26743374 - AluJo SINE Alu 0 312 1 434 207 43 106 chr17 62761392 62761507 -26743046 + L1MC5 LINE L1 7732 7853 -108 2034 95 0 34 chr17 62761507 62761803 -26742750 + AluSx SINE Alu 1 286 -26 264 59 0 0 chr17 62761803 62761837 -26742716 + (TA)n Simple_repeat Simple_repeat 2 35 0 434 207 43 106 chr17 62761837 62761908 -26742645 + L1MC5 LINE L1 7851 7907 -54 1820 156 0 0 chr17 62761918 62762206 -26742347 + AluJb SINE Alu 9 296 -16 1397 188 7 31 chr17 62762217 62762530 -26742023 + AluJo SINE Alu 3 308 0 543 296 96 47 chr17 62762685 62763871 -26740682 - L1MC/D LINE L1 -750 5396 4562 1814 171 36 47 chr17 62764050 62764268 -26740285 - MLT1A1 LTR MaLR 0 365 151 2000 113 36 3 chr17 62764268 62764570 -26739983 - AluSq SINE Alu -1 312 1 1814 171 36 47 chr17 62764570 62764713 -26739840 - MLT1A1 LTR MaLR -214 151 8 435 240 29 0 chr17 62765288 62765392 -26739161 - MER96 DNA MER1_type? -68 107 1 1072 314 63 65 chr17 62765669 62766038 -26738515 + ERVL LTR ERVL 2977 3346 -2418 2138 108 16 0 chr17 62766038 62766345 -26738208 + AluSx SINE Alu 1 312 0 1072 314 63 65 chr17 62766345 62766701 -26737852 + ERVL LTR ERVL 3346 3701 -2063 462 332 18 22 chr17 62766739 62767056 -26737497 + ERVL LTR ERVL 4803 4898 -98 1020 271 39 3 chr17 62767176 62767570 -26736983 + LTR16A LTR ERVL 19 444 -6 551 265 60 35 chr17 62768434 62768634 -26735919 - MIR SINE MIR -55 207 3 1890 148 3 0 chr17 62768889 62769187 -26735366 - AluSx SINE Alu -13 299 1 1977 130 10 3 chr17 62769351 62769658 -26734895 + AluSx SINE Alu 3 311 -1 325 309 95 0 chr17 62769949 62770075 -26734478 - L1MEd LINE L1 -5453 666 529 298 220 88 33 chr17 62770732 62770823 -26733730 + MIR SINE MIR 61 156 -106 1926 67 0 28 chr17 62770827 62771081 -26733472 + AluSq SINE Alu 1 247 -66 1031 109 14 0 chr17 62771081 62771228 -26733325 + AluSg/x SINE Alu 143 291 -21 297 296 28 46 chr17 62771229 62771337 -26733216 + MIR SINE MIR 149 254 -8 369 286 48 0 chr17 62772291 62772396 -26732157 + MER91C DNA MER1_type 31 140 0 353 239 109 6 chr17 62772408 62772557 -26731996 + MIR SINE MIR 15 254 -8 2237 96 16 0 chr17 62772741 62773044 -26731509 + AluSc SINE Alu 1 308 -1 319 268 83 55 chr17 62773144 62773441 -26731112 + L1ME3A LINE L1 5476 5774 -388 647 157 209 8 chr17 62773474 62773608 -26730945 - FRAM SINE Alu -19 157 1 180 0 0 0 chr17 62773612 62773632 -26730921 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2285 74 0 0 chr17 62773632 62773955 -26730598 - AluSq SINE Alu 0 323 1 712 265 55 15 chr17 62773959 62774231 -26730322 - HsTC2 DNA Tc2 -109 1789 1331 1071 184 42 19 chr17 62774251 62774463 -26730090 - MIR SINE MIR -28 234 18 308 364 0 0 chr17 62774483 62774648 -26729905 + L1ME3A LINE L1 5784 5948 -222 232 221 12 35 chr17 62774802 62774888 -26729665 + L1MC5 LINE L1 7845 7928 -33 1679 148 17 3 chr17 62775211 62775508 -26729045 + AluJo SINE Alu 1 301 -11 2098 100 7 0 chr17 62775873 62776173 -26728380 + AluSp SINE Alu 1 302 -11 242 295 62 9 chr17 62776370 62776482 -26728071 + L1MC4 LINE L1 7779 7896 -146 675 171 0 6 chr17 62776482 62776746 -26727807 + AluJ SINE Alu 1 312 0 316 284 11 32 chr17 62776763 62776839 -26727714 + L1MC5 LINE L1 7805 7880 -81 2185 105 3 3 chr17 62776839 62777145 -26727408 - AluSx SINE Alu -6 306 1 316 284 11 32 chr17 62777145 62777163 -26727390 + L1MC5 LINE L1 7880 7897 -64 1467 168 0 54 chr17 62777195 62777520 -26727033 - AluJo SINE Alu 0 309 1 412 291 106 20 chr17 62777608 62777759 -26726794 - MIR3 SINE MIR -29 179 16 2322 84 0 0 chr17 62778155 62778453 -26726100 + AluSx SINE Alu 1 298 -14 2107 109 0 22 chr17 62778453 62778773 -26725780 + AluSq SINE Alu 1 313 0 186 284 75 15 chr17 62779028 62779095 -26725458 - L3b LINE CR1 -207 1376 1306 250 368 0 11 chr17 62779952 62780039 -26724514 - MIR SINE MIR -85 123 38 1736 148 3 55 chr17 62780527 62780852 -26723701 + AluJo SINE Alu 1 308 -4 607 252 59 9 chr17 62781303 62781489 -26723064 - MIR SINE MIR -61 147 3 1987 122 14 3 chr17 62784280 62784574 -26719979 - AluSx SINE Alu -11 301 5 2254 82 0 10 chr17 62785002 62785306 -26719247 - AluSx SINE Alu -11 301 1 280 265 147 29 chr17 62785570 62785706 -26718847 + L1ME LINE L1 5498 5649 -472 1424 132 32 65 chr17 62786020 62786330 -26718223 + AluJo SINE Alu 10 309 -3 2024 145 0 3 chr17 62786334 62786645 -26717908 + AluSx SINE Alu 1 310 -2 258 161 36 18 chr17 62787459 62787515 -26717038 - L2 LINE L2 0 3272 3216 2418 64 0 0 chr17 62788433 62788730 -26715823 + AluY SINE Alu 1 297 -14 320 250 0 0 chr17 62788911 62788975 -26715578 - MER2 DNA MER2_type -2 343 280 32 0 0 0 chr17 62788980 62789012 -26715541 + AT_rich Low_complexity Low_complexity 1 32 0 1050 172 29 0 chr17 62789012 62789216 -26715337 - MER2 DNA MER2_type -134 211 2 1654 168 54 7 chr17 62790006 62790304 -26714249 + AluSx SINE Alu 1 312 0 883 162 16 60 chr17 62790307 62790342 -26714211 - L1MB5 LINE L1 -6 6168 6133 1672 147 7 27 chr17 62790342 62790641 -26713912 - AluJo SINE Alu -19 293 1 883 162 16 60 chr17 62790641 62790790 -26713763 - L1MB5 LINE L1 -41 6133 5992 731 290 33 12 chr17 62790811 62791056 -26713497 - L1MB5 LINE L1 -2063 5745 5496 710 207 0 96 chr17 62791068 62791219 -26713334 + AluJb SINE Alu 1 132 -180 396 0 0 0 chr17 62791219 62791263 -26713290 + (CA)n Simple_repeat Simple_repeat 2 45 0 710 207 0 96 chr17 62791263 62791299 -26713254 + AluJb SINE Alu 132 170 -142 21 0 0 0 chr17 62791299 62791320 -26713233 + AT_rich Low_complexity Low_complexity 1 21 0 1772 151 27 7 chr17 62791320 62791612 -26712941 + AluJb SINE Alu 1 298 -14 513 238 64 12 chr17 62791632 62791804 -26712749 - L1MB5 LINE L1 -2320 5488 5308 1345 204 88 9 chr17 62791807 62792125 -26712428 + MLT1A1 LTR MaLR 1 343 -22 227 267 140 46 chr17 62792130 62792415 -26712138 - L1MB5 LINE L1 -843 5303 4992 1051 162 6 22 chr17 62792445 62792624 -26711929 - FAM SINE Alu -2 47 1 32 43 0 0 chr17 62792757 62792803 -26711750 + AT_rich Low_complexity Low_complexity 1 46 0 1899 111 6 57 chr17 62792805 62793121 -26711432 + AluSx SINE Alu 1 300 -12 1939 136 0 10 chr17 62793210 62793511 -26711042 - AluSx SINE Alu 0 312 15 249 300 25 0 chr17 62794149 62794229 -26710324 - L2 LINE L2 -5 3267 3186 227 200 40 0 chr17 62794226 62794276 -26710277 + L2 LINE L2 3220 3271 -1 * 5448 78 12 24 chr17 62794461 62795311 -26709242 + SVA Other Other 596 1436 0 2165 95 10 0 chr17 62795343 62795638 -26708915 + AluSg SINE Alu 1 298 -12 2376 59 0 0 chr17 62795708 62795996 -26708557 + AluY SINE Alu 1 288 -23 1880 143 3 3 chr17 62796028 62796322 -26708231 - AluSx SINE Alu -16 296 3 718 183 24 0 chr17 62796424 62796550 -26708003 - FLAM_C SINE Alu -4 129 1 336 257 0 14 chr17 62796555 62796629 -26707924 + L1ME4a LINE L1 6048 6120 -1 2162 77 0 0 chr17 62796729 62797003 -26707550 - AluSx SINE Alu -38 274 1 449 287 77 49 chr17 62797106 62797353 -26707200 + MIR SINE MIR 9 262 0 474 338 63 16 chr17 62799115 62799499 -26705054 + L1MC4a LINE L1 5596 5722 -448 324 289 133 0 chr17 62799747 62799875 -26704678 - MIR SINE MIR -57 205 61 357 24 0 0 chr17 62800003 62800045 -26704508 + (CA)n Simple_repeat Simple_repeat 2 43 0 458 281 12 47 chr17 62800938 62801009 -26703544 + MIR SINE MIR 76 148 -114 1506 141 141 4 chr17 62801009 62801296 -26703257 + AluJo SINE Alu 2 322 0 458 281 12 47 chr17 62801296 62801394 -26703159 + MIR SINE MIR 148 240 -22 2182 122 28 36 chr17 62801664 62802057 -26702496 - MLT1B LTR MaLR 0 390 1 529 200 15 44 chr17 62802068 62802203 -26702350 + LTR33 LTR ERVL 2 132 -389 487 200 28 48 chr17 62802262 62802407 -26702146 + LTR33 LTR ERVL 301 442 -79 2015 110 0 63 chr17 62802435 62802754 -26701799 + AluSx SINE Alu 1 299 -13 917 135 0 0 chr17 62802956 62803089 -26701464 + AluJo SINE Alu 1 133 -169 850 226 6 0 chr17 62803119 62803296 -26701257 + AluJo SINE Alu 121 298 -14 2023 125 0 23 chr17 62803395 62803699 -26700854 + AluSx SINE Alu 1 297 -15 184 315 73 67 chr17 62803857 62804035 -26700518 + L2 LINE L2 3060 3238 -34 600 215 37 7 chr17 62804313 62804448 -26700105 + MIR SINE MIR 111 249 -13 1947 141 3 3 chr17 62804512 62804818 -26699735 + AluJo SINE Alu 1 306 -6 302 200 0 0 chr17 62804863 62804918 -26699635 - Alu SINE Alu -7 294 240 2121 96 0 3 chr17 62804920 62805202 -26699351 - AluSx SINE Alu -31 281 1 266 182 212 15 chr17 62805547 62805613 -26698940 - MER5A DNA MER1_type -86 103 25 372 263 0 0 chr17 62805617 62805693 -26698860 - MER81 DNA DNA 0 114 39 317 175 16 0 chr17 62805884 62805947 -26698606 - MER69 DNA AcHobo -3 2523 2460 2323 87 0 7 chr17 62805951 62806261 -26698292 + AluSq SINE Alu 1 308 -5 280 78 20 0 chr17 62806262 62806313 -26698240 - MER69 DNA AcHobo -2377 149 98 346 293 195 24 chr17 62806810 62807015 -26697538 + MIR SINE MIR 9 248 -14 680 168 168 0 chr17 62807576 62807725 -26696828 + MER5B DNA MER1_type 5 178 0 586 242 159 6 chr17 62807733 62807890 -26696663 - MER5A DNA MER1_type 0 189 9 806 196 129 0 chr17 62807908 62808071 -26696482 - MER5A DNA MER1_type -2 187 4 362 273 168 31 chr17 62808087 62808248 -26696305 + MIR SINE MIR 23 205 -57 247 196 187 56 chr17 62808265 62808372 -26696181 - MER5B DNA MER1_type -3 175 55 828 233 0 0 chr17 62808374 62808524 -26696029 - FRAM SINE Alu -16 160 11 1627 137 3 73 chr17 62808543 62808858 -26695695 - AluJo SINE Alu -19 293 1 201 217 65 0 chr17 62808870 62808916 -26695637 + MER5B DNA MER1_type 125 173 -5 582 171 179 0 chr17 62808929 62809052 -26695501 - MER5A DNA MER1_type -3 186 42 292 287 143 66 chr17 62809304 62809548 -26695005 + L3 LINE CR1 1302 1564 -13 2240 95 20 0 chr17 62812055 62812359 -26692194 + AluSg SINE Alu 1 310 0 1891 130 3 14 chr17 62813103 62813387 -26691166 + AluSx SINE Alu 4 284 -28 297 0 0 0 chr17 62813387 62813420 -26691133 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2384 90 0 0 chr17 62814140 62814451 -26690102 - AluSq SINE Alu -2 311 1 219 322 207 0 chr17 62814485 62814606 -26689947 + L2 LINE L2 3127 3272 0 473 205 33 73 chr17 62815039 62815190 -26689363 + MIR3 SINE MIR 41 185 -23 502 273 153 6 chr17 62817746 62817922 -26686631 - MER63A DNA MER1_type -5 205 4 189 403 0 0 chr17 62818737 62818814 -26685739 + L2 LINE L2 3237 3313 0 1950 138 0 19 chr17 62819000 62819311 -26685242 - AluJo SINE Alu -7 305 1 212 259 0 19 chr17 62819902 62819956 -26684597 - MIR3 SINE MIR -17 191 139 2107 124 0 3 chr17 62819970 62820277 -26684276 + AluSx SINE Alu 1 306 -6 190 244 128 0 chr17 62820658 62820736 -26683817 + L2 LINE L2 3202 3289 -24 183 247 151 0 chr17 62822364 62822437 -26682116 + L2 LINE L2 3168 3251 -21 322 348 9 9 chr17 62822537 62822649 -26681904 + MIR SINE MIR 32 143 -65 210 118 0 59 chr17 62823173 62823224 -26681329 + (CGGGGG)n Simple_repeat Simple_repeat 4 51 0 358 331 77 6 chr17 62824417 62824598 -26679955 + L2 LINE L2 2650 2843 -471 365 326 82 47 chr17 62824635 62824978 -26679575 + L2 LINE L2 2915 3269 -3 540 256 87 0 chr17 62825192 62825364 -26679189 - MIR SINE MIR -32 230 44 764 174 8 23 chr17 62825678 62825810 -26678743 + FLAM_A SINE Alu 1 130 -3 21 0 0 0 chr17 62825901 62825922 -26678631 + AT_rich Low_complexity Low_complexity 1 21 0 2089 118 7 0 chr17 62825938 62826242 -26678311 + AluSx SINE Alu 6 311 -1 411 289 161 23 chr17 62826508 62826726 -26677827 + MIR SINE MIR 10 257 -5 351 0 0 0 chr17 62826976 62827015 -26677538 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 2080 101 0 0 chr17 62827019 62827295 -26677258 - AluSx SINE Alu -36 276 1 564 268 77 6 chr17 62827448 62827631 -26676922 + MER117 DNA MER1_type 1 196 -1 286 336 41 25 chr17 62827633 62827755 -26676798 + L2 LINE L2 3137 3260 -12 194 357 0 0 chr17 62827759 62827829 -26676724 - L3b LINE CR1 -185 1398 1329 451 290 98 22 chr17 62828080 62828568 -26675985 + L1ME3A LINE L1 5430 6162 -8 314 273 50 16 chr17 62828595 62828716 -26675837 - MIR SINE MIR -55 207 83 988 87 0 0 chr17 62829040 62829167 -26675386 - AluSg/x SINE Alu -117 193 67 222 171 0 0 chr17 62829499 62829540 -26675013 + (CA)n Simple_repeat Simple_repeat 1 41 0 2710 128 9 49 chr17 62830899 62831351 -26673202 + Tigger2a DNA MER2_type 1 434 0 344 217 12 36 chr17 62831526 62831609 -26672944 - L2 LINE L2 -4 3268 3188 282 236 31 118 chr17 62831708 62831770 -26672783 + MIR SINE MIR 139 186 -76 2336 93 3 0 chr17 62831770 62832081 -26672472 + AluSx SINE Alu 1 312 0 282 236 31 118 chr17 62832081 62832145 -26672408 + MIR SINE MIR 186 254 -8 2487 71 0 0 chr17 62832514 62832824 -26671729 - AluSg SINE Alu 0 310 1 444 309 113 26 chr17 62832878 62833189 -26671364 + L2 LINE L2 2862 3199 -73 323 223 39 68 chr17 62833213 62833316 -26671237 - MER5A DNA MER1_type -89 100 1 209 224 60 75 chr17 62833316 62833349 -26671204 + L2 LINE L2 3241 3272 0 22 88 0 0 chr17 62833802 62833859 -26670694 + GC_rich Low_complexity Low_complexity 1 57 0 444 322 201 0 chr17 62834397 62834611 -26669942 - MIR SINE MIR -4 258 2 2536 42 0 10 chr17 62835143 62835449 -26669104 - AluY SINE Alu -8 303 1 1763 121 24 45 chr17 62835829 62836119 -26668434 - AluSx SINE Alu -14 298 15 247 314 54 37 chr17 62836187 62836219 -26668334 - L1ME4a LINE L1 -119 6002 5972 2171 116 6 6 chr17 62836219 62836530 -26668023 - AluSx SINE Alu 0 312 2 247 314 54 37 chr17 62836530 62836739 -26667814 - L1ME4a LINE L1 -149 5972 5757 270 269 156 21 chr17 62837413 62837554 -26666999 + MIR SINE MIR 65 224 -38 293 264 23 0 chr17 62837890 62837977 -26666576 - MIR SINE MIR -62 146 58 569 270 47 0 chr17 62838359 62838507 -26666046 - MIR SINE MIR -59 203 49 220 312 0 22 chr17 62838640 62838734 -26665819 + MIR SINE MIR 36 126 -82 363 215 94 60 chr17 62839148 62839297 -26665256 + MIR SINE MIR 9 162 -100 1323 264 169 20 chr17 62839340 62840366 -26664187 + L2 LINE L2 2124 3313 0 300 232 18 80 chr17 62840492 62840604 -26663949 - MIR SINE MIR -69 193 89 434 271 51 28 chr17 62841176 62841353 -26663200 - MER117 DNA MER1_type -10 187 7 231 36 0 0 chr17 62841675 62841703 -26662850 + (TG)n Simple_repeat Simple_repeat 2 29 0 211 305 85 0 chr17 62842059 62842141 -26662412 + MIR SINE MIR 63 151 -57 2267 88 0 0 chr17 62842142 62842436 -26662117 + AluSg1 SINE Alu 1 294 -15 2150 110 10 0 chr17 62842717 62843018 -26661535 + AluSx SINE Alu 1 304 -8 863 289 20 24 chr17 62843372 62843625 -26660928 - MIR SINE MIR -3 259 8 323 204 0 82 chr17 62843609 62843707 -26660846 + L2 LINE L2 3179 3268 -4 * 508 274 95 61 chr17 62844496 62844792 -26659761 + L1MC4a LINE L1 5603 5908 -1900 366 23 0 0 chr17 62844816 62844859 -26659694 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 0 0 0 chr17 62844989 62845014 -26659539 + AT_rich Low_complexity Low_complexity 1 25 0 2238 106 3 3 chr17 62845087 62845399 -26659154 - AluSx SINE Alu 0 312 1 815 242 86 12 chr17 62845453 62845697 -26658856 - MIR SINE MIR 0 262 1 2124 74 67 0 chr17 62845717 62846002 -26658551 + AluY SINE Alu 1 304 -7 2136 99 0 0 chr17 62846061 62846353 -26658200 + AluSg SINE Alu 1 292 -18 191 307 40 0 chr17 62846982 62847057 -26657496 - MIR SINE MIR -167 95 18 275 300 0 0 chr17 62847804 62847884 -26656669 - MIR SINE MIR -109 99 20 290 288 56 88 chr17 62848878 62849003 -26655550 - MIR SINE MIR -23 239 119 441 324 62 6 chr17 62849246 62849422 -26655131 + MER5A DNA MER1_type 3 188 -1 646 285 13 6 chr17 62849439 62849597 -26654956 + MIR3 SINE MIR 38 196 -12 2166 97 0 52 chr17 62850220 62850550 -26654003 + AluSq SINE Alu 1 313 0 674 94 10 10 chr17 62850572 62850668 -26653885 + AluSg/x SINE Alu 198 293 -19 564 246 74 0 chr17 62851145 62851284 -26653269 - MIR SINE MIR -64 144 36 1594 162 11 7 chr17 62852008 62852280 -26652273 + AluJo SINE Alu 24 296 -16 378 0 0 0 chr17 62853578 62853620 -26650933 + (CA)n Simple_repeat Simple_repeat 2 43 0 3805 142 6 49 chr17 62854297 62854973 -26649580 + L1MB4 LINE L1 5533 6179 -1 2238 101 3 3 chr17 62855017 62855324 -26649229 + AluSq SINE Alu 1 307 -6 2149 95 24 0 chr17 62855892 62856186 -26648367 + AluSq SINE Alu 1 301 -12 936 129 0 0 chr17 62856395 62856527 -26648026 - AluSg/x SINE Alu -22 288 157 1175 233 27 10 chr17 62856649 62856945 -26647608 + L1ME3A LINE L1 5851 6151 -19 1527 225 3 0 chr17 62857122 62857433 -26647120 - AluSx SINE Alu 0 312 1 600 215 37 7 chr17 62857497 62857632 -26646921 - MIR SINE MIR -13 249 111 2062 119 7 0 chr17 62858102 62858397 -26646156 + AluY SINE Alu 1 297 -14 296 155 0 28 chr17 62858449 62858520 -26646033 - MER3 DNA MER1_type -5 204 136 861 62 36 0 chr17 62858569 62858681 -26645872 - AluSq/x SINE Alu -197 116 1 477 219 18 9 chr17 62858681 62858795 -26645758 - MER3 DNA MER1_type -58 151 37 966 127 0 20 chr17 62859353 62859541 -26645012 - FRAM SINE Alu 0 184 1 934 135 0 0 chr17 62859877 62860082 -26644471 + FLAM_C SINE Alu 1 205 0 893 190 17 0 chr17 62860479 62860653 -26643900 - MER5A DNA MER1_type 0 189 13 2168 114 0 13 chr17 62860888 62861204 -26643349 - AluSx SINE Alu 0 312 1 232 184 0 41 chr17 62861358 62861407 -26643146 - L2 LINE L2 0 3272 3226 195 217 33 17 chr17 62861937 62861997 -26642556 + MIR SINE MIR 81 141 -121 1401 159 19 70 chr17 62862232 62862443 -26642110 - AluJo SINE Alu -8 304 113 2329 88 0 7 chr17 62862443 62862749 -26641804 + AluSq SINE Alu 3 306 -7 1401 159 19 70 chr17 62862749 62862852 -26641701 - AluJo SINE Alu -199 113 6 331 309 19 101 chr17 62863261 62863568 -26640985 + L2 LINE L2 2979 3260 -12 356 258 73 24 chr17 62864301 62864425 -26640128 - MIR SINE MIR -17 245 116 211 320 238 7 chr17 62864486 62864633 -26639920 + L3b LINE CR1 1223 1403 -180 714 227 111 14 chr17 62866915 62867131 -26637422 - MIR SINE MIR -1 261 25 187 294 0 0 chr17 62867160 62867211 -26637342 - MIR SINE MIR -62 146 96 702 282 87 17 chr17 62867566 62867853 -26636700 + Charlie2 DNA MER1_type 1 307 -2475 713 251 38 0 chr17 62867995 62868178 -26636375 + Charlie2a DNA MER1_type 1474 1663 -1199 2032 125 3 0 chr17 62868244 62868548 -26636005 - AluSx SINE Alu -5 307 3 2048 112 0 13 chr17 62868561 62868864 -26635689 - AluSq SINE Alu -1 312 14 308 247 22 11 chr17 62868870 62868959 -26635594 + Charlie2 DNA MER1_type 2773 2862 0 295 321 19 28 chr17 62869085 62869191 -26635362 + MIR SINE MIR 47 151 -111 678 276 124 5 chr17 62869345 62869562 -26634991 - MIR SINE MIR -2 260 18 469 287 153 0 chr17 62869573 62869730 -26634823 + MER5A DNA MER1_type 9 189 0 250 283 0 0 chr17 62869903 62869963 -26634590 + L1ME4a LINE L1 5967 6026 -95 2011 129 0 16 chr17 62870017 62870334 -26634219 - AluSx SINE Alu 0 312 1 318 299 102 8 chr17 62870522 62870649 -26633904 + MIR3 SINE MIR 10 148 -60 2147 127 0 0 chr17 62871228 62871527 -26633026 + AluSx SINE Alu 1 299 -13 186 353 62 39 chr17 62871539 62871689 -26632864 - MIR3 SINE MIR -41 167 16 293 323 138 6 chr17 62872001 62872168 -26632385 + MIR SINE MIR 72 260 -2 197 132 26 26 chr17 62872224 62872262 -26632291 + MER5B DNA MER1_type 6 43 -135 717 185 0 0 chr17 62872263 62872382 -26632171 - AluJ SINE Alu -2 310 192 806 177 7 0 chr17 62872382 62872523 -26632030 - AluJ SINE Alu -170 142 1 251 200 0 0 chr17 62872546 62872591 -26631962 - MER5A DNA MER1_type -123 66 22 364 251 115 55 chr17 62873174 62873357 -26631196 - MIR SINE MIR -6 256 63 673 189 49 0 chr17 62873374 62873496 -26631057 - FLAM_A SINE Alu -2 131 4 2339 72 0 0 chr17 62873510 62873801 -26630752 - AluSc SINE Alu -18 291 1 808 130 0 62 chr17 62875907 62876053 -26628500 + FLAM_C SINE Alu 2 138 -5 866 259 5 5 chr17 62877219 62877424 -26627129 - MIR SINE MIR -54 208 4 2430 54 7 0 chr17 62877669 62877965 -26626588 + AluY SINE Alu 5 302 -9 773 275 12 16 chr17 62878555 62878800 -26625753 - MIR SINE MIR -2 260 17 323 246 76 34 chr17 62878800 62878918 -26625635 + MER5C DNA MER1_type 1 123 -201 238 208 19 0 chr17 62879029 62879082 -26625471 + MER5C DNA MER1_type 271 324 0 2276 78 7 10 chr17 62879192 62879500 -26625053 - AluSq SINE Alu -6 307 1 486 245 224 0 chr17 62879502 62879649 -26624904 - MER5A DNA MER1_type -6 183 4 1652 185 33 0 chr17 62880404 62880706 -26623847 + AluJb SINE Alu 1 312 0 243 250 44 0 chr17 62880775 62880843 -26623710 - L2 LINE L2 -2 3270 3200 1994 118 3 35 chr17 62881387 62881701 -26622852 + AluSx SINE Alu 1 304 -8 2304 87 3 3 chr17 62881701 62882010 -26622543 + AluY SINE Alu 1 309 -2 1973 100 0 0 chr17 62882015 62882274 -26622279 + AluSq SINE Alu 39 297 -16 885 156 183 5 chr17 62882294 62882480 -26622073 - MER20 DNA MER1_type 0 219 1 342 261 0 11 chr17 62882491 62882583 -26621970 + MER5B DNA MER1_type 4 94 -84 1400 157 15 47 chr17 62883414 62883509 -26621044 + AluJo SINE Alu 44 141 -171 2170 111 0 0 chr17 62883509 62883806 -26620747 + AluSg SINE Alu 1 297 -13 1400 157 15 47 chr17 62883806 62883984 -26620569 + AluJo SINE Alu 141 308 -4 2244 120 0 0 chr17 62884113 62884405 -26620148 - AluSx SINE Alu -20 292 1 363 23 0 0 chr17 62884776 62884820 -26619733 + (CA)n Simple_repeat Simple_repeat 2 45 0 2399 89 0 0 chr17 62886224 62886516 -26618037 - AluSc SINE Alu -17 292 1 493 248 28 0 chr17 62886615 62886724 -26617829 - MIR SINE MIR -59 203 92 2223 132 3 0 chr17 62886726 62887036 -26617517 + AluJb SINE Alu 1 311 -1 1407 194 93 7 chr17 62887046 62887324 -26617229 + AluJb SINE Alu 1 302 -10 28 29 0 0 chr17 62887364 62887399 -26617154 + AT_rich Low_complexity Low_complexity 1 35 0 239 258 118 0 chr17 62887399 62887492 -26617061 - MIR SINE MIR -154 108 5 2251 99 7 16 chr17 62888021 62888358 -26616195 - AluSp SINE Alu 0 313 1 2303 118 3 0 chr17 62888358 62888664 -26615889 - AluSx SINE Alu -5 307 1 1738 162 3 48 chr17 62888668 62888977 -26615576 - AluJo SINE Alu -17 295 1 216 312 102 36 chr17 62889448 62889595 -26614958 - MIR SINE MIR -35 173 20 21 0 0 0 chr17 62889648 62889669 -26614884 + AT_rich Low_complexity Low_complexity 1 21 0 309 172 92 35 chr17 62889776 62889863 -26614690 + MLT1J2 LTR MaLR 67 158 -292 390 231 0 11 chr17 62889963 62890054 -26614499 + MLT1I LTR MaLR 316 405 -4 251 321 55 28 chr17 62890112 62890221 -26614332 - L2 LINE L2 0 3313 3202 183 279 73 15 chr17 62890414 62890482 -26614071 + MIR SINE MIR 48 119 -89 575 264 176 0 chr17 62890779 62890927 -26613626 + MER91A DNA MER1_type 1 174 -22 243 155 42 42 chr17 62890978 62891049 -26613504 + L1MC5 LINE L1 7865 7935 -26 360 244 160 13 chr17 62891080 62891236 -26613317 + MIR SINE MIR 82 260 -2 2267 113 0 22 chr17 62891767 62892086 -26612467 - AluSx SINE Alu 0 312 1 2636 50 0 0 chr17 62892145 62892446 -26612107 + AluY SINE Alu 2 302 -9 778 224 70 53 chr17 62893357 62893585 -26610968 + MIR SINE MIR 31 262 0 23 0 0 0 chr17 62893585 62893608 -26610945 + AT_rich Low_complexity Low_complexity 1 23 0 2543 60 3 0 chr17 62893608 62893907 -26610646 - AluSp SINE Alu -13 300 1 246 325 23 0 chr17 62894029 62894122 -26610431 - MIR SINE MIR -102 106 36 199 256 0 0 chr17 62894969 62895008 -26609545 + MIR SINE MIR 54 92 -116 680 228 81 61 chr17 62895040 62895135 -26609418 - MIR SINE MIR -6 256 164 1820 98 118 35 chr17 62895135 62895422 -26609131 + AluSx SINE Alu 1 311 -1 680 228 81 61 chr17 62895422 62895572 -26608981 - MIR SINE MIR -98 164 6 2027 152 0 13 chr17 62896914 62897229 -26607324 + AluSx SINE Alu 1 311 -1 242 222 16 32 chr17 62897526 62897589 -26606964 - L2 LINE L2 0 3313 3252 557 342 77 17 chr17 62897985 62898283 -26606270 - L3b LINE CR1 -14 1569 1254 467 276 57 97 chr17 62898545 62898824 -26605729 + L2 LINE L2 3000 3267 -5 2069 151 30 0 chr17 62898962 62899261 -26605292 - AluJb SINE Alu -4 308 1 891 221 61 48 chr17 62899274 62899505 -26605048 + MIR SINE MIR 19 252 -10 2029 139 0 7 chr17 62899555 62899850 -26604703 - AluSx SINE Alu -19 293 1 2506 78 0 0 chr17 62899859 62900166 -26604387 - AluSx SINE Alu -1 311 5 222 274 27 27 chr17 62900975 62901048 -26603505 - MIR SINE MIR -184 78 6 2372 88 3 3 chr17 62901116 62901410 -26603143 - AluSx SINE Alu -18 294 1 2309 122 0 0 chr17 62901841 62902178 -26602375 - AluSq SINE Alu 0 337 1 183 167 33 0 chr17 62902382 62902412 -26602141 - L2 LINE L2 -25 3247 3217 24 0 0 0 chr17 62904608 62904632 -26599921 + GC_rich Low_complexity Low_complexity 1 24 0 40 53 0 32 chr17 62904776 62904870 -26599683 + GC_rich Low_complexity Low_complexity 1 91 0 218 242 10 40 chr17 62904911 62905010 -26599543 + G-rich Low_complexity Low_complexity 6 101 0 196 87 0 43 chr17 62905100 62905146 -26599407 + (CGGGG)n Simple_repeat Simple_repeat 1 44 0 1307 81 0 29 chr17 62906703 62906875 -26597678 - AluSg/x SINE Alu -17 293 127 324 0 0 0 chr17 62908009 62908045 -26596508 + (TA)n Simple_repeat Simple_repeat 2 37 0 2184 118 27 0 chr17 62908045 62908342 -26596211 - AluSq SINE Alu -8 305 1 2482 79 3 13 chr17 62908343 62908375 -26596178 - AluSp SINE Alu 0 313 282 207 0 0 0 chr17 62908375 62908398 -26596155 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2482 79 3 13 chr17 62908398 62908681 -26595872 - AluSp SINE Alu -31 282 1 231 314 71 54 chr17 62909027 62909266 -26595287 + L2 LINE L2 2639 2881 -433 2139 109 11 0 chr17 62909284 62909567 -26594986 + AluSx SINE Alu 13 298 -14 1329 165 13 39 chr17 62910018 62910248 -26594305 - AluJo SINE Alu -88 224 1 198 103 0 0 chr17 62910329 62910358 -26594195 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 371 233 69 85 chr17 62910832 62910878 -26593675 + L1ME4a LINE L1 5793 5838 -283 2142 95 70 0 chr17 62910878 62911163 -26593390 + AluSg SINE Alu 1 305 -5 371 233 69 85 chr17 62911163 62911433 -26593120 + L1ME4a LINE L1 5838 6104 -17 995 104 0 142 chr17 62911544 62911727 -26592826 - FRAM SINE Alu -8 168 12 447 235 117 11 chr17 62912547 62912726 -26591827 - L1MC4 LINE L1 -980 7062 6865 * 948 214 108 86 chr17 62912710 62913020 -26591533 + L1MC4 LINE L1 7170 7495 -547 2406 98 7 0 chr17 62913020 62913325 -26591228 - AluSc SINE Alu -2 307 1 948 214 108 86 chr17 62913325 62913477 -26591076 + L1MC4 LINE L1 7495 7642 -400 2245 81 30 3 chr17 62913762 62914057 -26590496 + AluSc SINE Alu 1 303 -6 881 226 46 28 chr17 62914078 62914401 -26590152 + L1MC4 LINE L1 7710 8038 -4 348 186 14 0 chr17 62914409 62914479 -26590074 - L1MC4a LINE L1 -1010 6798 6728 2418 68 3 0 chr17 62914664 62914960 -26589593 + AluSc SINE Alu 2 298 -11 752 268 31 18 chr17 62916219 62916279 -26588274 - MIR SINE MIR -29 233 175 2187 134 0 0 chr17 62916279 62916578 -26587975 + AluSq SINE Alu 4 302 -11 752 268 31 18 chr17 62916578 62916745 -26587808 - MIR SINE MIR -87 175 3 2422 102 0 0 chr17 62917519 62917823 -26586730 - AluSg SINE Alu -6 304 1 265 89 0 0 chr17 62918755 62918800 -26585753 - Alu SINE Alu -3 297 253 776 152 0 0 chr17 62918809 62918921 -26585632 + AluSg/x SINE Alu 178 289 -23 2110 66 3 88 chr17 62918923 62919268 -26585285 + AluSp SINE Alu 1 318 0 1749 141 0 0 chr17 62919279 62919527 -26585026 - AluSx SINE Alu -7 305 58 2371 74 7 7 chr17 62919832 62920130 -26584423 - AluY SINE Alu -13 298 1 208 279 58 35 chr17 62920735 62920821 -26583732 + L2 LINE L2 3162 3249 -23 31 0 0 0 chr17 62923386 62923417 -26581136 + AT_rich Low_complexity Low_complexity 1 31 0 219 340 107 19 chr17 62924709 62924868 -26579685 + MIR SINE MIR 22 194 -68 1914 137 14 4 chr17 62925459 62925736 -26578817 - AluJo SINE Alu -20 292 13 210 37 0 0 chr17 62926053 62926080 -26578473 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1896 161 0 35 chr17 62926770 62927080 -26577473 - AluJo SINE Alu -13 299 1 2467 86 3 0 chr17 62927220 62927524 -26577029 + AluSp SINE Alu 5 309 -4 2156 137 0 7 chr17 62927574 62927881 -26576672 + AluSx SINE Alu 1 305 -7 396 103 0 0 chr17 62928879 62928937 -26575616 + (CTG)n Simple_repeat Simple_repeat 2 59 0 942 121 8 0 chr17 62929331 62929463 -26575090 + AluSq/x SINE Alu 1 133 -179 22 70 0 0 chr17 62929615 62929658 -26574895 + AT_rich Low_complexity Low_complexity 1 43 0 926 314 129 45 chr17 62929699 62930885 -26573668 - L2 LINE L2 -1369 1945 661 1275 106 6 22 chr17 62930985 62931148 -26573405 - AluSg/x SINE Alu -16 294 133 2204 108 7 0 chr17 62931148 62931445 -26573108 - AluSq SINE Alu -14 299 1 1275 106 6 22 chr17 62931445 62931461 -26573092 - AluSg/x SINE Alu -177 133 118 1771 136 41 47 chr17 62931716 62931986 -26572567 + MER58B DNA MER1_type 4 273 -2147 2297 106 0 7 chr17 62931986 62932288 -26572265 + AluSc SINE Alu 2 301 -8 1771 136 41 47 chr17 62932288 62932356 -26572197 + MER58B DNA MER1_type 273 340 -1 248 28 56 0 chr17 62932647 62932683 -26571870 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 852 167 28 0 chr17 62933162 62933306 -26571247 + FRAM SINE Alu 14 161 -15 570 122 56 47 chr17 62933578 62933595 -26570958 + HSMAR2 DNA Mariner 325 340 -962 2588 50 3 0 chr17 62933595 62933892 -26570661 + AluSp SINE Alu 2 299 -14 570 122 56 47 chr17 62933892 62933981 -26570572 + HSMAR2 DNA Mariner 340 432 -870 2309 81 21 3 chr17 62934471 62934756 -26569797 + AluSc SINE Alu 1 290 -19 2215 119 0 19 chr17 62934765 62935076 -26569477 + AluSq SINE Alu 1 305 -8 4403 121 16 47 chr17 62935202 62935929 -26568624 + HSMAR2 DNA Mariner 417 1121 -181 422 270 99 9 chr17 62936821 62936989 -26567564 + MIR SINE MIR 5 187 -62 198 0 0 0 chr17 62938492 62938514 -26566039 + (CAAAG)n Simple_repeat Simple_repeat 3 24 0 1437 140 22 0 chr17 62941296 62941518 -26563035 + AluJb SINE Alu 77 303 -9 495 220 13 60 chr17 62941647 62941797 -26562756 - MLT1I LTR MaLR -2 407 265 598 277 55 19 chr17 62941814 62942036 -26562517 + MIR SINE MIR 16 245 -17 1945 113 0 4 chr17 62942217 62942482 -26562071 + AluSq SINE Alu 1 264 -49 1828 162 7 3 chr17 62942519 62942809 -26561744 - AluSx SINE Alu -21 291 1 196 336 144 16 chr17 62943250 62943375 -26561178 + L2 LINE L2 3114 3254 -18 2448 93 3 0 chr17 62943848 62944159 -26560394 + AluSp SINE Alu 1 312 -1 1758 175 4 4 chr17 62944179 62944453 -26560100 + AluJo SINE Alu 1 274 -38 29 78 0 0 chr17 62944540 62944604 -26559949 + AT_rich Low_complexity Low_complexity 1 64 0 1849 153 0 37 chr17 62944614 62944935 -26559618 + AluJo SINE Alu 1 309 -3 1584 239 88 122 chr17 62945214 62946108 -26558445 + HAL1 LINE L1 772 1624 -883 853 70 0 16 chr17 62946108 62946236 -26558317 + (TTTC)n Simple_repeat Simple_repeat 3 128 0 1584 239 88 122 chr17 62946236 62946441 -26558112 + HAL1 LINE L1 1624 1834 -673 186 43 0 0 chr17 62946478 62946501 -26558052 + (CTATT)n Simple_repeat Simple_repeat 2 24 0 2176 112 30 0 chr17 62946507 62946810 -26557743 - AluSx SINE Alu 0 312 1 3760 194 33 22 chr17 62947023 62947803 -26556750 + L1MC3 LINE L1 5780 6568 -1217 1209 174 0 0 chr17 62947803 62947999 -26556554 + MSTB LTR MaLR 1 196 -230 1622 137 24 107 chr17 62947999 62948335 -26556218 + AluYb8 SINE Alu 1 308 -10 823 132 0 8 chr17 62948406 62948535 -26556018 + AluSg/x SINE Alu 177 304 -8 1506 165 0 21 chr17 62948535 62948778 -26555775 + MSTB LTR MaLR 189 426 0 249 119 0 0 chr17 62948784 62948826 -26555727 + (TA)n Simple_repeat Simple_repeat 1 42 0 1767 100 8 0 chr17 62948827 62949068 -26555485 + L1MC3 LINE L1 6619 6861 -924 1263 107 0 0 chr17 62949117 62949286 -26555267 + AluSg/x SINE Alu 142 310 0 639 125 137 77 chr17 62949292 62949460 -26555093 + L1MC3 LINE L1 6856 7033 -752 2661 182 17 21 chr17 62949478 62949519 -26555034 + L1MC3 LINE L1 7160 7200 -585 2241 100 3 7 chr17 62949519 62949828 -26554725 + AluSx SINE Alu 1 308 -4 2661 182 17 21 chr17 62949828 62950303 -26554250 + L1MC3 LINE L1 7200 7674 -111 352 178 30 40 chr17 62950303 62950404 -26554149 + L1MD2 LINE L1 6259 6358 -1 307 224 75 9 chr17 62950405 62950512 -26554041 + HAL1 LINE L1 2035 2148 -359 2190 92 0 14 chr17 62950524 62950830 -26553723 + AluSc SINE Alu 1 302 0 1065 181 0 11 chr17 62950884 62951061 -26553492 + AluJb SINE Alu 1 175 -137 2321 70 3 3 chr17 62951713 62951998 -26552555 + AluY SINE Alu 11 295 -16 185 310 150 53 chr17 62952591 62952704 -26551849 - L2 LINE L2 -15 3257 3134 294 200 18 0 chr17 62953455 62953510 -26551043 - L2 LINE L2 -15 3257 3202 820 176 15 0 chr17 62954455 62954586 -26549967 + FLAM_C SINE Alu 1 133 -10 2360 93 0 3 chr17 62954797 62955098 -26549455 + AluSg SINE Alu 1 300 -10 2104 114 20 3 chr17 62956527 62956824 -26547729 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr17 62958741 62958763 -26545790 + AT_rich Low_complexity Low_complexity 1 22 0 513 269 168 11 chr17 62959384 62959670 -26544883 - MER46C DNA MER2_type 0 338 8 1791 163 7 7 chr17 62961390 62961684 -26542869 + AluSx SINE Alu 1 294 -18 27 29 0 0 chr17 62962980 62963014 -26541539 + AT_rich Low_complexity Low_complexity 1 34 0 21 71 0 0 chr17 62964093 62964135 -26540418 + GC_rich Low_complexity Low_complexity 1 42 0 243 61 0 0 chr17 62964639 62964672 -26539881 + (TG)n Simple_repeat Simple_repeat 1 33 0 41 58 0 0 chr17 62964837 62964906 -26539647 + GC_rich Low_complexity Low_complexity 1 69 0 252 86 0 0 chr17 62965021 62965056 -26539497 + (CGG)n Simple_repeat Simple_repeat 3 37 0 41 36 0 0 chr17 62965112 62965167 -26539386 + GC_rich Low_complexity Low_complexity 1 55 0 34 72 0 0 chr17 62965249 62965318 -26539235 + GC_rich Low_complexity Low_complexity 1 69 0 491 298 76 20 chr17 62967657 62967855 -26536698 + MIR SINE MIR 44 252 -10 301 211 56 0 chr17 62973890 62973961 -26530592 - Charlie8 DNA MER1_type -2270 147 73 2032 80 39 3 chr17 62973970 62974256 -26530297 + AluSx SINE Alu 1 296 -16 1902 113 34 10 chr17 62974432 62974725 -26529828 + AluSx SINE Alu 1 300 -12 264 200 0 0 chr17 62975309 62975369 -26529184 + (TA)n Simple_repeat Simple_repeat 1 60 0 896 235 0 0 chr17 62975369 62975531 -26529022 - FRAM SINE Alu -4 162 1 1285 116 0 0 chr17 62975548 62975721 -26528832 - AluSx SINE Alu -139 173 1 2040 158 0 0 chr17 62975724 62976034 -26528519 - AluJo SINE Alu -2 310 1 323 154 0 0 chr17 62976288 62976340 -26528213 + HSMAR2 DNA Mariner 299 350 -952 2147 137 0 0 chr17 62976400 62976699 -26527854 - AluSx SINE Alu -13 299 1 233 132 0 0 chr17 62977542 62977580 -26526973 + HSMAR2 DNA Mariner 2 39 -1263 606 58 0 0 chr17 62977680 62977772 -26526781 + AluSg/x SINE Alu 213 304 0 2179 100 0 0 chr17 62978117 62978421 -26526132 + AluY SINE Alu 1 304 0 1898 170 0 13 chr17 62978475 62978787 -26525766 + AluJb SINE Alu 1 308 -4 28 0 0 0 chr17 62978828 62978856 -26525697 + AT_rich Low_complexity Low_complexity 1 28 0 1922 208 75 8 chr17 62979111 62979731 -26524822 + Zaphod DNA AcHobo 2 694 -3337 1789 162 20 110 chr17 62979731 62979762 -26524791 + MLT1A1 LTR MaLR 1 33 -332 2587 143 53 15 chr17 62979762 62980174 -26524379 - MSTB1 LTR MaLR -4 428 1 1789 162 20 110 chr17 62980174 62980543 -26524010 + MLT1A1 LTR MaLR 33 365 0 544 149 31 103 chr17 62980543 62980634 -26523919 + Zaphod DNA AcHobo 691 787 -3244 1919 137 14 0 chr17 62980634 62980919 -26523634 - AluSx SINE Alu -23 289 1 544 149 31 103 chr17 62980919 62980969 -26523584 + Zaphod DNA AcHobo 787 839 -3192 2381 106 0 0 chr17 62980969 62981271 -26523282 - AluSx SINE Alu -10 302 1 544 149 31 103 chr17 62981271 62981363 -26523190 + Zaphod DNA AcHobo 839 898 -3133 2182 94 6 53 chr17 62981363 62981682 -26522871 - AluSx SINE Alu -6 306 3 544 149 31 103 chr17 62981682 62981767 -26522786 + Zaphod DNA AcHobo 898 988 -3043 692 179 64 175 chr17 62981767 62982018 -26522535 - MER58A DNA MER1_type 0 224 2 722 184 54 5 chr17 62982022 62982207 -26522346 + Zaphod DNA AcHobo 3603 3796 -235 1099 217 0 4 chr17 62982207 62982451 -26522102 + L1MB8 LINE L1 5062 5304 -842 1708 178 4 0 chr17 62982452 62982733 -26521820 + AluJo SINE Alu 1 282 -30 3228 163 25 30 chr17 62982758 62982952 -26521601 + L1MB8 LINE L1 5293 5486 -692 2258 91 3 3 chr17 62982952 62983271 -26521282 + AluSx SINE Alu 1 319 0 3228 163 25 30 chr17 62983271 62983802 -26520751 + L1MB8 LINE L1 5486 6067 -111 2158 125 0 3 chr17 62984077 62984381 -26520172 - AluSx SINE Alu -9 303 1 630 271 83 6 chr17 62984663 62984844 -26519709 - MIR SINE MIR -32 230 36 1049 155 0 24 chr17 62985123 62985291 -26519262 + AluJb SINE Alu 134 297 -15 305 295 47 68 chr17 62985967 62986157 -26518396 - MIR3 SINE MIR -9 199 14 439 202 0 55 chr17 62988606 62988715 -26515838 + MIR SINE MIR 80 182 -80 2312 99 0 10 chr17 62988869 62989171 -26515382 - AluSx SINE Alu -13 299 1 2773 85 14 14 chr17 62990741 62991105 -26513448 + THE1B LTR MaLR 1 364 0 1594 148 0 4 chr17 62991714 62991951 -26512602 + AluSx SINE Alu 1 236 -76 22 70 0 0 chr17 62991986 62992029 -26512524 + AT_rich Low_complexity Low_complexity 1 43 0 2363 14 0 14 chr17 62992029 62992307 -26512246 - L1PA3 LINE L1 -5 6150 5877 32 67 0 0 chr17 62992444 62992504 -26512049 + AT_rich Low_complexity Low_complexity 1 60 0 548 235 5 59 chr17 62992514 62992701 -26511852 - MER112 DNA MER1_type -82 178 2 477 314 64 45 chr17 62992917 62993137 -26511416 - MIR SINE MIR -20 242 19 235 254 8 92 chr17 62993534 62993664 -26510889 - L2 LINE L2 -1 3271 3153 221 192 103 77 chr17 62994414 62994492 -26510061 - MIR3 SINE MIR -16 192 113 398 232 0 0 chr17 62994494 62994576 -26509977 + MER81 DNA DNA 1 82 -32 260 247 0 27 chr17 62994839 62994912 -26509641 + L1ME LINE L1 5510 5580 -541 1554 126 21 94 chr17 62995007 62995107 -26509446 + AluJo SINE Alu 27 133 -179 2231 138 0 0 chr17 62995107 62995418 -26509135 - AluSx SINE Alu 0 312 2 1554 126 21 94 chr17 62995418 62995603 -26508950 + AluJo SINE Alu 133 291 -21 1901 174 3 0 chr17 62995662 62995960 -26508593 + AluJb SINE Alu 1 299 -13 311 236 160 9 chr17 62996437 62996543 -26508010 + MIR SINE MIR 48 169 -93 807 178 7 161 chr17 62996564 62996583 -26507970 + MER21B LTR ERV1 6 26 -837 2355 109 0 0 chr17 62996583 62996885 -26507668 + AluSx SINE Alu 1 302 -10 807 178 7 161 chr17 62996885 62997151 -26507402 + MER21B LTR ERV1 26 247 -616 806 217 233 32 chr17 62997236 62997550 -26507003 + MER21B LTR ERV1 412 788 -75 319 225 62 12 chr17 62997550 62997630 -26506923 - MIR SINE MIR -39 223 140 1229 286 49 24 chr17 62997736 62998288 -26506265 + L2 LINE L2 501 1066 -2248 947 227 37 105 chr17 62998350 62998751 -26505802 - MLT1B LTR MaLR -16 374 1 1977 224 77 16 chr17 62998751 62999246 -26505307 + MLT1F1 LTR MaLR 36 560 -7 3674 256 55 38 chr17 62999251 63000440 -26504113 + L2 LINE L2 1067 2276 -1038 859 273 79 6 chr17 63001286 63001698 -26502855 - LTR33 LTR ERVL -53 468 1 2170 97 37 20 chr17 63001993 63002154 -26502399 - AluSx SINE Alu -7 305 135 1989 133 49 0 chr17 63002154 63002439 -26502114 - AluSc SINE Alu -10 299 1 2170 97 37 20 chr17 63002439 63002577 -26501976 - AluSx SINE Alu -177 135 1 207 270 81 54 chr17 63003127 63003238 -26501315 - MIR3 SINE MIR -83 125 12 340 246 121 67 chr17 63003704 63003944 -26500609 + MLT1L LTR MaLR 363 615 0 435 241 66 51 chr17 63004920 63005057 -26499496 - MER5B DNA MER1_type -7 171 33 347 310 49 42 chr17 63004936 63005078 -26499475 + MER5A DNA MER1_type 36 178 -11 * 1749 161 16 30 chr17 63005138 63005442 -26499111 + AluJo SINE Alu 1 300 -12 182 125 0 25 chr17 63006051 63006091 -26498462 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 188 206 44 73 chr17 63006170 63006238 -26498315 - MIR SINE MIR -89 173 108 215 279 225 18 chr17 63007676 63007787 -26496766 + MIR SINE MIR 64 197 -65 782 310 26 4 chr17 63007794 63008026 -26496527 - MIR SINE MIR -10 252 16 252 286 0 0 chr17 63008056 63008112 -26496441 + MIR SINE MIR 206 261 -1 2249 107 0 7 chr17 63008622 63008922 -26495631 - AluSc SINE Alu -11 298 1 937 224 0 0 chr17 63009525 63009686 -26494867 + FAM SINE Alu 1 161 -14 1649 168 17 38 chr17 63009947 63010238 -26494315 + AluJo SINE Alu 12 296 -16 376 299 63 23 chr17 63011236 63011410 -26493143 - MIR3 SINE MIR -25 183 3 778 218 0 0 chr17 63012045 63012178 -26492375 + FLAM_A SINE Alu 1 133 0 250 195 0 0 chr17 63012442 63012483 -26492070 - L2 LINE L2 -11 3302 3262 324 267 78 33 chr17 63012524 63012614 -26491939 - MIR SINE MIR -167 95 2 243 356 102 0 chr17 63012738 63012856 -26491697 + L2 LINE L2 3143 3272 0 398 318 32 24 chr17 63013949 63014075 -26490478 - MIR3 SINE MIR -69 139 13 570 303 80 69 chr17 63014640 63015228 -26489325 - L2 LINE L2 0 3272 2674 1137 140 68 84 chr17 63015237 63015470 -26489083 - MER33 DNA MER1_type -2269 316 88 2590 54 0 3 chr17 63015470 63015768 -26488785 - AluY SINE Alu -14 297 1 1137 140 68 84 chr17 63015768 63015855 -26488698 - MER33 DNA MER1_type -2497 88 1 286 257 11 134 chr17 63015951 63016138 -26488415 - L2 LINE L2 -836 2478 2315 469 222 217 26 chr17 63016167 63016522 -26488031 + MLT1J LTR MaLR 64 511 0 1082 277 24 15 chr17 63016523 63016862 -26487691 - L2 LINE L2 -996 2318 1977 279 311 63 79 chr17 63016957 63017455 -26487098 + L2 LINE L2 2717 3271 -1 7720 180 36 58 chr17 63017668 63017886 -26486667 + L1MB7 LINE L1 3163 3384 -2800 2452 88 47 3 chr17 63017886 63018228 -26486325 + L1PA14 LINE L1 5805 6161 0 7720 180 36 58 chr17 63018228 63018563 -26485990 + L1MB7 LINE L1 3384 3725 -2459 2006 106 44 0 chr17 63018563 63018863 -26485690 + AluSq SINE Alu 1 312 0 7720 180 36 58 chr17 63018863 63019019 -26485534 + L1MB7 LINE L1 3725 3883 -2301 1490 201 45 32 chr17 63019019 63019327 -26485226 + AluJb SINE Alu 1 312 0 7720 180 36 58 chr17 63019327 63019736 -26484817 + L1MB7 LINE L1 3883 4300 -1884 6743 48 7 116 chr17 63019736 63020806 -26483747 - SVA Other Other -1 1385 433 7720 180 36 58 chr17 63020806 63020874 -26483679 + L1MB7 LINE L1 4300 4368 -1816 6186 73 24 5 chr17 63020874 63021718 -26482835 - SVA Other Other -520 866 7 7720 180 36 58 chr17 63021718 63023611 -26480942 + L1MB7 LINE L1 4368 6172 -12 267 31 0 0 chr17 63023615 63023647 -26480906 + (TG)n Simple_repeat Simple_repeat 2 33 0 1614 174 8 0 chr17 63023709 63023973 -26480580 - AluSx SINE Alu -9 303 38 441 244 165 12 chr17 63024897 63025061 -26479492 - MIR3 SINE MIR 0 208 20 2314 105 0 0 chr17 63025122 63025417 -26479136 - AluSg SINE Alu -15 295 1 208 325 215 19 chr17 63025983 63026719 -26477834 - L2 LINE L2 -16 3256 2364 555 307 109 5 chr17 63026726 63026928 -26477625 - MIR SINE MIR -4 258 36 246 298 193 6 chr17 63026980 63027141 -26477412 - L2 LINE L2 -1046 2268 2078 607 291 52 12 chr17 63027525 63027776 -26476777 + MIR SINE MIR 2 262 0 189 0 0 0 chr17 63027831 63027852 -26476701 + (CA)n Simple_repeat Simple_repeat 2 22 0 628 353 26 0 chr17 63028039 63028229 -26476324 - MER91A DNA MER1_type -1 195 1 286 288 12 12 chr17 63028956 63029036 -26475517 + MIR3 SINE MIR 110 189 -19 230 231 0 0 chr17 63029667 63029719 -26474834 + C-rich Low_complexity Low_complexity 3 54 0 201 271 19 19 chr17 63029744 63029851 -26474702 + (CGGGG)n Simple_repeat Simple_repeat 5 111 0 217 156 22 0 chr17 63029805 63029850 -26474703 + G-rich Low_complexity Low_complexity 2 47 0 180 0 0 0 chr17 63029926 63029946 -26474607 + (CGGG)n Simple_repeat Simple_repeat 4 23 0 22 80 0 0 chr17 63030610 63030660 -26473893 + GC_rich Low_complexity Low_complexity 1 50 0 188 195 0 98 chr17 63031479 63031520 -26473033 - MIR SINE MIR -97 111 75 542 191 18 9 chr17 63032705 63032858 -26471695 - MER58B DNA MER1_type 0 341 28 305 319 124 24 chr17 63032906 63033075 -26471478 - MIR SINE MIR -67 195 10 362 179 232 0 chr17 63033143 63033238 -26471315 - MIR SINE MIR -75 187 71 213 39 0 0 chr17 63033893 63033919 -26470634 + (TG)n Simple_repeat Simple_repeat 2 27 0 241 331 95 20 chr17 63034629 63034777 -26469776 - MIR3 SINE MIR -23 185 27 252 167 0 0 chr17 63036683 63036731 -26467822 + (TG)n Simple_repeat Simple_repeat 1 48 0 390 276 50 45 chr17 63039029 63039228 -26465325 - LTR33 LTR ERVL -319 202 3 706 254 125 38 chr17 63039330 63039618 -26464935 + L2 LINE L2 2996 3308 -5 567 289 85 10 chr17 63040596 63040797 -26463756 + MIR SINE MIR 1 216 -46 210 294 196 10 chr17 63040919 63041021 -26463532 - MIR SINE MIR -63 145 25 2690 154 44 0 chr17 63041111 63041566 -26462987 - L1MB7 LINE L1 -61 6123 5649 995 188 61 33 chr17 63041615 63041828 -26462725 - MER58A DNA MER1_type -4 220 2 181 119 95 24 chr17 63041871 63041913 -26462640 + L2 LINE L2 1698 1742 -1572 1562 185 80 60 chr17 63042260 63042691 -26461862 - MLT2C1 LTR ERVL 0 464 1 7471 174 78 36 chr17 63042691 63044221 -26460332 - ERVL-C1 LTR ERVL -8 5756 4163 2839 153 60 88 chr17 63044221 63044766 -26459787 - L1ME1 LINE L1 -228 6007 5448 1643 198 3 3 chr17 63044766 63045054 -26459499 + AluJb SINE Alu 1 288 -24 2839 153 60 88 chr17 63045054 63045066 -26459487 - L1ME1 LINE L1 -787 5448 5437 2074 90 35 0 chr17 63045066 63045355 -26459198 - L1MA5A LINE L1 0 6297 5999 2839 153 60 88 chr17 63045355 63045826 -26458727 - L1ME1 LINE L1 -798 5437 5012 1381 170 44 41 chr17 63045849 63046143 -26458410 - AluJo SINE Alu -14 298 4 227 191 0 0 chr17 63046361 63046403 -26458150 + MLT1E3 LTR MaLR 570 611 -13 1606 192 21 0 chr17 63046496 63046782 -26457771 - AluJb SINE Alu -13 299 8 239 280 27 0 chr17 63047119 63047194 -26457359 + CT-rich Low_complexity Low_complexity 4 80 0 2730 199 65 52 chr17 63047195 63048044 -26456509 - L1ME1 LINE L1 -1198 5017 4158 1340 190 41 51 chr17 63048074 63048464 -26456089 - MLT1A1 LTR MaLR -12 374 14 228 94 0 0 chr17 63048495 63048527 -26456026 - L1ME1 LINE L1 -2086 4129 4098 914 143 0 0 chr17 63048527 63048646 -26455907 - FLAM_C SINE Alu -13 120 2 630 107 0 0 chr17 63048650 63048734 -26455819 - AluY SINE Alu -11 300 217 5755 219 76 28 chr17 63048755 63049797 -26454756 - L1ME1 LINE L1 -2136 4079 3088 2232 99 0 40 chr17 63049797 63050120 -26454433 - AluSg SINE Alu 0 310 1 5755 219 76 28 chr17 63050120 63050534 -26454019 - L1ME1 LINE L1 -3127 3088 2695 2364 101 0 3 chr17 63050534 63050840 -26453713 - AluSg SINE Alu -5 305 1 5755 219 76 28 chr17 63050840 63051297 -26453256 - L1ME1 LINE L1 -3520 2695 2123 470 219 0 0 chr17 63051302 63051384 -26453169 - Tigger5 DNA MER2_type 0 2323 2242 439 192 13 0 chr17 63051374 63051452 -26453101 + Tigger5 DNA MER2_type 2242 2320 -3 * 495 190 0 0 chr17 63051452 63051530 -26453023 - Tigger5 DNA MER2_type -2245 78 1 525 191 40 24 chr17 63051533 63051659 -26452894 - L1ME1 LINE L1 -4283 2113 1986 476 219 0 0 chr17 63051670 63051752 -26452801 - Tigger3(Golem) DNA MER2_type -2946 83 2 6725 118 45 14 chr17 63051799 63052436 -26452117 + Tigger3b DNA MER2_type 99 786 -2242 1950 158 10 3 chr17 63052436 63052739 -26451814 + AluJb SINE Alu 1 305 -7 6725 118 45 14 chr17 63052739 63053200 -26451353 + Tigger3b DNA MER2_type 786 1231 0 1255 289 21 39 chr17 63053211 63053322 -26451231 - L1ME1 LINE L1 -4442 1954 1843 2434 86 7 0 chr17 63053322 63053625 -26450928 - AluSg SINE Alu -5 305 1 1255 289 21 39 chr17 63053625 63054028 -26450525 - L1ME1 LINE L1 -4553 1843 1449 913 235 75 22 chr17 63054060 63054422 -26450131 - L1ME1 LINE L1 -5063 1333 953 462 246 105 50 chr17 63054439 63054706 -26449847 + L1MC4a LINE L1 5683 5969 -152 1118 260 4 4 chr17 63054730 63054972 -26449581 + MLT1F LTR MaLR 3 244 -298 631 194 8 0 chr17 63054993 63055117 -26449436 - MER53 DNA DNA -63 126 2 1153 164 89 79 chr17 63055122 63055229 -26449324 + MLT1F LTR MaLR 260 364 -178 2303 112 0 6 chr17 63055229 63055543 -26449010 - AluSx SINE Alu 0 312 1 1880 173 0 7 chr17 63055548 63055843 -26448710 - AluJo SINE Alu -19 293 1 1153 164 89 79 chr17 63055843 63056009 -26448544 + MLT1F LTR MaLR 367 542 0 405 0 0 0 chr17 63056109 63056154 -26448399 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 539 128 35 139 chr17 63056203 63056375 -26448178 + L1MB7 LINE L1 5744 5897 -287 535 144 0 22 chr17 63056377 63056467 -26448086 + MLT1F LTR MaLR 454 541 -1 180 245 0 57 chr17 63056509 63056562 -26447991 + L2 LINE L2 3222 3271 -1 2216 89 0 3 chr17 63057688 63057970 -26446583 - AluSx SINE Alu -31 281 1 238 156 0 22 chr17 63058273 63058318 -26446235 + MIR SINE MIR 117 160 -102 198 265 0 0 chr17 63058350 63058399 -26446154 - L2 LINE L2 -1 3312 3264 185 284 49 0 chr17 63058412 63058493 -26446060 + MIR3 SINE MIR 104 188 -20 2218 119 3 0 chr17 63058688 63058998 -26445555 - AluSx SINE Alu -1 311 1 2291 110 0 3 chr17 63059000 63059310 -26445243 - AluSx SINE Alu -1 311 3 524 113 0 0 chr17 63059332 63059412 -26445141 - L1MA8 LINE L1 -2 6289 6210 186 305 156 31 chr17 63059517 63059645 -26444908 + L2 LINE L2 3167 3310 -3 208 216 0 0 chr17 63059756 63059793 -26444760 + (CGTG)n Simple_repeat Simple_repeat 2 38 0 325 292 50 31 chr17 63059886 63060047 -26444506 - MIR3 SINE MIR -23 185 22 193 200 50 0 chr17 63060194 63060234 -26444319 - L2 LINE L2 -12 3260 3219 * 331 252 13 94 chr17 63060229 63060388 -26444165 + MIR SINE MIR 111 256 -6 2051 220 140 13 chr17 63060400 63061009 -26443544 - L1MEc LINE L1 -5660 736 51 1044 214 175 48 chr17 63061040 63061474 -26443079 - MLT1H LTR MaLR -48 501 13 604 224 32 6 chr17 63061502 63061658 -26442895 - MIR SINE MIR -76 186 27 321 256 65 7 chr17 63062759 63062916 -26441637 + MLT1I LTR MaLR 1 192 -217 241 208 21 0 chr17 63063009 63063057 -26441496 + MLT1I LTR MaLR 353 401 -8 470 240 160 7 chr17 63063288 63063438 -26441115 + MIR SINE MIR 39 211 -51 802 148 14 19 chr17 63063876 63064180 -26440373 + (ATGGTG)n Simple_repeat Simple_repeat 1 302 0 438 238 148 29 chr17 63064212 63064422 -26440131 + MIR SINE MIR 12 246 -16 463 278 123 11 chr17 63064447 63064634 -26439919 - MIR SINE MIR -26 236 29 348 262 112 10 chr17 63064640 63064935 -26439618 + L1MC4a LINE L1 5683 5832 -326 2257 107 0 0 chr17 63064986 63065277 -26439276 - AluSg SINE Alu -19 291 1 1032 245 171 35 chr17 63065367 63065800 -26438753 + L2 LINE L2 2822 3313 0 219 186 0 23 chr17 63065903 63065946 -26438607 - L2 LINE L2 -79 3234 3193 188 266 16 62 chr17 63065963 63066027 -26438526 - L2 LINE L2 -19 3253 3193 221 174 0 22 chr17 63066572 63066618 -26437935 + L2 LINE L2 3265 3309 -4 207 146 0 0 chr17 63066656 63066697 -26437856 - L2 LINE L2 -1 3312 3272 227 203 42 25 chr17 63067298 63067416 -26437137 + (TTATA)n Simple_repeat Simple_repeat 4 123 0 265 210 136 0 chr17 63067420 63067501 -26437052 - HAL1b LINE L1 -10 1338 1247 2380 83 0 0 chr17 63067511 63067801 -26436752 + AluSg SINE Alu 1 290 -20 1481 171 143 48 chr17 63067806 63068078 -26436475 - HsTC2 DNA Tc2 -1 1897 1652 363 23 0 0 chr17 63068078 63068122 -26436431 + (TG)n Simple_repeat Simple_repeat 1 44 0 1481 171 143 48 chr17 63068122 63068187 -26436366 - HsTC2 DNA Tc2 -246 1652 1595 2171 83 10 3 chr17 63068187 63068475 -26436078 + AluSq SINE Alu 17 306 -7 1481 171 143 48 chr17 63068475 63068570 -26435983 - HsTC2 DNA Tc2 -303 1595 1247 388 177 168 53 chr17 63068567 63068680 -26435873 - HsTC2 DNA Tc2 -1766 132 7 * 1536 201 34 85 chr17 63068690 63069218 -26435335 - HAL1b LINE L1 -118 1230 730 2345 82 0 13 chr17 63069257 63069560 -26434993 - AluSp SINE Alu -14 299 1 294 247 72 10 chr17 63069597 63069694 -26434859 - HAL1 LINE L1 -4 2503 2401 340 263 15 38 chr17 63069778 63069911 -26434642 - HAL1 LINE L1 -229 2278 2149 304 212 167 61 chr17 63069911 63070109 -26434444 - MER97c DNA MER1_type? 0 1090 872 3151 198 73 33 chr17 63070540 63070652 -26433901 - MER97b DNA MER1_type? -200 853 747 2183 70 37 20 chr17 63070652 63070979 -26433574 + AluY SINE Alu 1 311 0 2051 107 21 24 chr17 63070984 63071275 -26433278 + AluSq SINE Alu 1 290 -23 3151 198 73 33 chr17 63071275 63071976 -26432577 - MER97b DNA MER1_type? -309 744 1 1438 264 56 40 chr17 63071977 63072495 -26432058 - HAL1 LINE L1 -352 2155 1630 1619 156 48 31 chr17 63072571 63072860 -26431693 - AluJb SINE Alu -18 294 1 2382 201 108 26 chr17 63072862 63073475 -26431078 - L1MD2 LINE L1 -227 6132 5470 1726 132 43 25 chr17 63073494 63073795 -26430758 - AluSx SINE Alu 0 306 1 2033 139 0 0 chr17 63073832 63074119 -26430434 - AluSx SINE Alu -19 293 7 508 108 0 14 chr17 63074127 63074201 -26430352 + MSTA LTR MaLR 356 428 0 448 200 12 11 chr17 63074201 63074306 -26430247 - L1M4 LINE L1 -1977 4169 4064 703 128 26 19 chr17 63074410 63074566 -26429987 + CT-rich Low_complexity Low_complexity 4 160 0 907 192 0 0 chr17 63074568 63074714 -26429839 - FRAM SINE Alu -31 145 1 1445 264 125 44 chr17 63074714 63075539 -26429014 - HAL1 LINE L1 -955 1552 661 415 228 33 102 chr17 63075916 63076131 -26428422 + MLT1L LTR MaLR 195 394 -221 513 95 0 0 chr17 63076582 63076645 -26427908 + AluS SINE Alu 2 64 -249 415 308 75 89 chr17 63076974 63077081 -26427472 + L2 LINE L2 2804 2911 -361 16335 29 7 1 chr17 63077081 63079678 -26424875 + L1PA4 LINE L1 3553 6155 0 415 308 75 89 chr17 63079678 63079996 -26424557 + L2 LINE L2 2911 3223 -49 507 307 68 10 chr17 63080545 63080737 -26423816 + MIR3 SINE MIR 2 204 -4 197 339 0 0 chr17 63080737 63080793 -26423760 - MIR SINE MIR -108 100 45 2193 110 3 20 chr17 63081066 63081366 -26423187 - AluSx SINE Alu -17 295 1 2659 157 16 19 chr17 63081423 63081850 -26422703 - MSTB LTR MaLR 0 426 1 693 173 13 15 chr17 63081895 63082010 -26422543 + AluJ SINE Alu 2 116 -196 342 0 0 0 chr17 63082010 63082048 -26422505 + (CA)n Simple_repeat Simple_repeat 2 39 0 693 173 13 15 chr17 63082048 63082169 -26422384 + AluJ SINE Alu 116 291 -21 1450 203 8 0 chr17 63082553 63082814 -26421739 - AluJo SINE Alu -49 263 1 1229 237 53 29 chr17 63082815 63083336 -26421217 - L1ME LINE L1 -5099 1297 774 571 168 11 0 chr17 63083891 63083986 -26420567 - MLT1A1 LTR MaLR 0 365 270 302 143 20 0 chr17 63084021 63084070 -26420483 - MLT1A1 LTR MaLR -181 184 135 1221 151 94 61 chr17 63084072 63084408 -26420145 + MLT1A1 LTR MaLR 2 426 -2 781 203 0 0 chr17 63084410 63084548 -26420005 - MLT1A1 LTR MaLR -227 138 1 786 183 0 15 chr17 63084730 63084861 -26419692 + FLAM_A SINE Alu 2 130 -3 248 309 0 125 chr17 63085386 63085471 -26419082 - MIR3 SINE MIR -49 159 100 2055 148 0 3 chr17 63085471 63085781 -26418772 - AluSx SINE Alu -3 309 1 248 309 0 125 chr17 63085781 63085847 -26418706 - MIR3 SINE MIR -108 100 27 258 32 0 0 chr17 63085849 63085880 -26418673 + (TTG)n Simple_repeat Simple_repeat 2 32 0 490 233 41 48 chr17 63085880 63085978 -26418575 - L1MD1 LINE L1 -6 6236 6138 2613 149 23 28 chr17 63085978 63086407 -26418146 - MSTC LTR MaLR 0 428 2 490 233 41 48 chr17 63086407 63086454 -26418099 - L1MD1 LINE L1 -104 6138 6092 649 297 49 40 chr17 63086534 63086695 -26417858 + HAL1b LINE L1 275 433 -915 1801 138 9 61 chr17 63086695 63087021 -26417532 - AluJo SINE Alu -3 309 1 649 297 49 40 chr17 63087021 63087229 -26417324 + HAL1b LINE L1 433 647 -701 461 313 72 5 chr17 63087230 63087425 -26417128 + HAL1b LINE L1 671 878 -470 317 309 7 87 chr17 63087511 63087584 -26416969 + HAL1b LINE L1 794 873 -475 22 0 0 0 chr17 63087584 63087606 -26416947 + AT_rich Low_complexity Low_complexity 1 22 0 317 309 7 87 chr17 63087606 63087660 -26416893 + HAL1b LINE L1 873 930 -418 986 231 74 16 chr17 63087768 63088080 -26416473 + L1M4 LINE L1 2506 2835 -3311 300 250 0 12 chr17 63088110 63088190 -26416363 + L1M4 LINE L1 87 165 -6377 325 95 0 68 chr17 63088192 63088266 -26416287 + (TCTCCC)n Simple_repeat Simple_repeat 2 70 0 9611 28 0 199 chr17 63088266 63089991 -26414562 + SVA Other Other 3 1384 -2 28 29 0 0 chr17 63089991 63090026 -26414527 + AT_rich Low_complexity Low_complexity 1 35 0 5576 228 77 39 chr17 63090048 63090882 -26413671 + L1M4 LINE L1 446 1247 -5397 1579 190 13 22 chr17 63090882 63091193 -26413360 + AluJo SINE Alu 1 308 -4 5576 228 77 39 chr17 63091193 63093763 -26410790 + L1M4 LINE L1 1247 4232 -2412 2746 166 22 55 chr17 63093801 63094402 -26410151 + L1MB7 LINE L1 5581 6161 -23 841 252 12 62 chr17 63096274 63096532 -26408021 + MIR SINE MIR 8 252 -10 276 280 0 20 chr17 63096532 63096632 -26407921 + (CTA)n Simple_repeat Simple_repeat 1 98 0 460 166 114 114 chr17 63097427 63097620 -26406933 - L1ME4a LINE L1 -3 6118 5926 2643 75 9 0 chr17 63097720 63098065 -26406488 - L1PA11 LINE L1 -1 6173 5826 686 307 100 12 chr17 63098154 63098493 -26406060 - L1ME4a LINE L1 -269 5852 5484 1112 123 6 0 chr17 63098610 63098773 -26405780 - AluSq SINE Alu -149 164 1 243 262 10 48 chr17 63098991 63099094 -26405459 - L1MC5 LINE L1 -157 7804 7706 1538 186 3 3 chr17 63099122 63099417 -26405136 + AluJo SINE Alu 1 295 -17 1427 185 60 4 chr17 63100308 63100589 -26403964 - AluJo SINE Alu -13 299 3 813 151 0 22 chr17 63100590 63100729 -26403824 - AluJo SINE Alu -176 136 1 180 0 0 0 chr17 63100736 63100756 -26403797 + (T)n Simple_repeat Simple_repeat 1 20 0 464 250 65 108 chr17 63102658 63102716 -26401837 - MIR SINE MIR -7 255 196 2209 89 7 0 chr17 63102716 63103018 -26401535 - AluSx SINE Alu -8 304 1 464 250 65 108 chr17 63103018 63103191 -26401362 - MIR SINE MIR -66 196 34 30 27 0 0 chr17 63104522 63104559 -26399994 + AT_rich Low_complexity Low_complexity 1 37 0 1379 209 10 101 chr17 63105707 63106104 -26398449 + MLT1A1 LTR MaLR 5 365 0 300 264 64 27 chr17 63106256 63106366 -26398187 + L2 LINE L2 3165 3278 -35 2425 77 0 3 chr17 63106595 63106907 -26397646 + AluSq SINE Alu 3 313 0 546 315 55 4 chr17 63107070 63107308 -26397245 - L3 LINE CR1 -242 1335 1086 480 281 61 32 chr17 63107373 63107747 -26396806 - MLT1L LTR MaLR 0 615 197 248 153 153 17 chr17 63107777 63107836 -26396717 - MLT1L LTR MaLR -547 68 2 741 255 25 92 chr17 63108144 63108402 -26396151 + HAL1 LINE L1 717 942 -1565 933 119 40 34 chr17 63108402 63108508 -26396045 - L1MD1 LINE L1 0 6242 6133 2138 164 19 3 chr17 63108508 63108867 -26395686 + MLT1A1 LTR MaLR 1 365 0 933 119 40 34 chr17 63108867 63108937 -26395616 - L1MD1 LINE L1 -109 6133 6065 741 255 25 92 chr17 63108937 63109070 -26395483 + HAL1 LINE L1 942 1082 -1425 975 243 127 15 chr17 63109073 63109341 -26395212 + MLT1G1 LTR MaLR 3 300 -295 937 299 66 23 chr17 63109347 63109865 -26394688 - HAL1b LINE L1 -695 653 114 319 277 81 40 chr17 63109988 63110136 -26394417 - L1M3c LINE L1 -4858 1717 1564 330 67 0 0 chr17 63110439 63110484 -26394069 + (TG)n Simple_repeat Simple_repeat 2 46 0 365 0 22 0 chr17 63111235 63111280 -26393273 + (GA)n Simple_repeat Simple_repeat 1 46 0 1624 169 67 18 chr17 63111281 63111612 -26392941 - MLT2C1 LTR ERVL -50 347 1 764 213 19 0 chr17 63112678 63112833 -26391720 + MER5A DNA MER1_type 4 161 -28 1985 58 61 14 chr17 63114202 63114495 -26390058 + AluY SINE Alu 1 307 -4 2001 115 10 13 chr17 63114664 63114977 -26389576 - AluSx SINE Alu 0 312 1 602 303 37 28 chr17 63115658 63115876 -26388677 - MIR SINE MIR -32 230 11 235 348 27 36 chr17 63117423 63117535 -26387018 + MIR SINE MIR 20 130 -132 364 242 223 5 chr17 63117994 63118205 -26386348 - L1ME3A LINE L1 -208 5962 5706 420 175 88 0 chr17 63118230 63118310 -26386243 - AluSp SINE Alu -133 180 94 769 214 12 12 chr17 63118316 63118489 -26386064 - L1M3c LINE L1 -4953 1589 1417 3578 192 65 3 chr17 63118498 63119159 -26385394 + L1M3f LINE L1 2 703 -4625 1593 135 128 0 chr17 63119161 63119465 -26385088 + L1M3f LINE L1 738 1080 -4248 * 2731 257 102 56 chr17 63119463 63119492 -26385061 - L1M3c LINE L1 -5112 1430 1404 2089 115 7 0 chr17 63119492 63119787 -26384766 - AluSg SINE Alu -13 297 1 2731 257 102 56 chr17 63119787 63120332 -26384221 - L1M3c LINE L1 -5138 1404 886 2954 118 7 19 chr17 63120332 63120765 -26383788 + MSTA LTR MaLR 1 428 0 2731 257 102 56 chr17 63120765 63121556 -26382997 - L1M3c LINE L1 -5656 886 1 639 263 94 23 chr17 63121984 63122326 -26382227 - HAL1 LINE L1 -1351 1156 791 1075 174 0 0 chr17 63122354 63122521 -26382032 - AluJb SINE Alu -14 298 132 803 226 50 6 chr17 63122697 63122878 -26381675 - MER5A DNA MER1_type 0 189 1 368 174 229 0 chr17 63123124 63123233 -26381320 + MER97c DNA MER1_type? 45 178 -912 2373 77 0 0 chr17 63124242 63124539 -26380014 + AluSp SINE Alu 1 297 -16 2079 113 3 0 chr17 63124724 63125017 -26379536 + AluSx SINE Alu 1 294 -18 351 0 0 0 chr17 63125101 63125140 -26379413 + (CA)n Simple_repeat Simple_repeat 2 40 0 2109 147 62 27 chr17 63125671 63126209 -26378344 + MLT2A2 LTR ERVL 2 554 0 736 211 25 29 chr17 63126213 63126417 -26378136 - L1MCc LINE L1 -6204 219 17 614 330 11 0 chr17 63126454 63126630 -26377923 - MER91A DNA MER1_type 0 196 19 234 62 0 0 chr17 63126805 63126837 -26377716 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 416 343 118 5 chr17 63126902 63127106 -26377447 + MIR SINE MIR 9 235 -27 265 304 31 37 chr17 63127237 63127398 -26377155 + LTR16B LTR ERVL 1 160 -304 1137 303 71 14 chr17 63127795 63128234 -26376319 - L2 LINE L2 -16 3297 2834 1048 247 177 50 chr17 63128248 63128763 -26375790 - MLT1G LTR MaLR -8 582 3 460 329 6 25 chr17 63128781 63128942 -26375611 - L2 LINE L2 -518 2796 2639 265 233 35 23 chr17 63128935 63129021 -26375532 + MIR SINE MIR 16 102 -106 * 2276 46 4 4 chr17 63129056 63129387 -26375166 - AluY SINE Alu 0 333 3 330 275 22 22 chr17 63129455 63129546 -26375007 + L2 LINE L2 3181 3271 -1 2155 107 3 10 chr17 63130388 63130698 -26373855 + AluSx SINE Alu 1 308 -4 363 286 147 75 chr17 63132361 63132798 -26371755 - L2 LINE L2 0 3272 2805 247 288 119 84 chr17 63133646 63134073 -26370480 - L2 LINE L2 -1 3271 2830 1897 272 48 4 chr17 63134373 63134891 -26369662 + MER97a DNA MER1_type? 8 548 -346 846 181 67 98 chr17 63134892 63135311 -26369242 + MER97c DNA MER1_type? 655 1060 -30 1885 132 4 0 chr17 63135314 63135595 -26368958 + AluSx SINE Alu 1 282 -30 453 36 0 0 chr17 63135613 63135668 -26368885 + (TG)n Simple_repeat Simple_repeat 2 56 0 215 172 31 94 chr17 63136255 63136319 -26368234 - L2 LINE L2 -9 3263 3204 216 261 154 39 chr17 63137604 63137734 -26366819 - MIR3 SINE MIR -62 146 2 201 221 71 61 chr17 63138230 63138326 -26366227 - MIR SINE MIR -79 129 33 379 279 29 29 chr17 63138660 63138764 -26365789 - L2 LINE L2 0 3272 3169 461 259 19 0 chr17 63138774 63138882 -26365671 - MIR3 SINE MIR -29 179 70 282 227 0 40 chr17 63138903 63138978 -26365575 - L2 LINE L2 -6 3307 3236 462 308 57 0 chr17 63140616 63140775 -26363778 + MIR SINE MIR 21 188 -74 226 266 31 39 chr17 63140905 63141033 -26363520 + (TCTA)n Simple_repeat Simple_repeat 2 128 0 288 210 0 0 chr17 63142143 63142224 -26362329 + (CA)n Simple_repeat Simple_repeat 2 82 0 184 319 29 14 chr17 63142297 63142366 -26362187 + L2 LINE L2 2991 3060 -212 2157 151 0 0 chr17 63142401 63142877 -26361676 - AluSx SINE Alu 0 476 1 480 276 153 6 chr17 63143067 63143230 -26361323 + MIR3 SINE MIR 19 205 -3 192 244 146 12 chr17 63143275 63143357 -26361196 - L2 LINE L2 -209 3063 2971 490 289 141 24 chr17 63143890 63144181 -26360372 - L3 LINE CR1 -72 1505 1181 2295 124 0 0 chr17 63144298 63144605 -26359948 - AluSx SINE Alu -5 307 1 579 310 35 20 chr17 63144616 63144819 -26359734 - MIR SINE MIR -56 206 1 214 299 23 0 chr17 63145791 63145878 -26358675 + MIR SINE MIR 46 134 -74 479 303 65 12 chr17 63147376 63147572 -26356981 - MIR SINE MIR -38 224 24 2635 122 61 23 chr17 63147851 63148294 -26356259 - LTR46 LTR ERV1 0 460 1 273 30 0 0 chr17 63148294 63148327 -26356226 - LTR46-int LTR ERV1 0 6985 6953 840 179 118 0 chr17 63148845 63149091 -26355462 - L1MB7 LINE L1 0 6184 5910 182 304 18 0 chr17 63149172 63149228 -26355325 - L2 LINE L2 0 3272 3216 2945 6 0 0 chr17 63150120 63150431 -26354122 + AluYa5 SINE Alu 1 311 0 377 279 188 46 chr17 63150454 63150651 -26353902 + MIR SINE MIR 32 256 -6 209 57 29 0 chr17 63151932 63151967 -26352586 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 675 207 100 22 chr17 63153848 63154038 -26350515 + MIR SINE MIR 34 236 -26 4563 69 8 32 chr17 63155131 63155722 -26348831 - SVA Other Other 0 1386 810 2098 284 103 27 chr17 63155755 63157067 -26347486 - L2 LINE L2 -2 3311 1848 1858 168 0 10 chr17 63158037 63158335 -26346218 - AluJo SINE Alu -17 295 1 29 0 0 0 chr17 63158446 63158475 -26346078 + AT_rich Low_complexity Low_complexity 1 29 0 879 260 66 9 chr17 63159050 63159277 -26345276 + MIR SINE MIR 23 262 0 432 335 68 6 chr17 63159713 63159889 -26344664 + MIR3 SINE MIR 5 191 -17 38 0 0 0 chr17 63161064 63161102 -26343451 + AT_rich Low_complexity Low_complexity 1 38 0 1016 163 47 0 chr17 63161728 63161900 -26342653 - FRAM SINE Alu -3 173 1 213 347 107 0 chr17 63161931 63162052 -26342501 - L2 LINE L2 -2 3270 3137 330 288 72 16 chr17 63162861 63162986 -26341567 - MIR3 SINE MIR -8 200 69 327 214 0 0 chr17 63163011 63163081 -26341472 + L1ME LINE L1 5529 5598 -523 2072 133 3 14 chr17 63163464 63163758 -26340795 - AluSx SINE Alu -21 291 1 1726 188 26 16 chr17 63163996 63164305 -26340248 + AluJo SINE Alu 1 312 0 2657 42 0 0 chr17 63164636 63164947 -26339606 + AluY SINE Alu 1 311 0 250 297 184 22 chr17 63166632 63166817 -26337736 - MIR SINE MIR -1 261 47 2851 3 0 0 chr17 63166921 63167221 -26337332 - AluYa5 SINE Alu -11 300 1 934 174 13 4 chr17 63167546 63167780 -26336773 - L1MB3 LINE L1 -51 6132 5823 5724 85 0 0 chr17 63167780 63168530 -26336023 - L1PA8 LINE L1 -4 6168 5419 801 226 44 0 chr17 63168703 63168862 -26335691 + AluJb SINE Alu 65 230 -82 1525 214 110 4 chr17 63168865 63169338 -26335215 + L1MC4 LINE L1 4177 4699 -1447 2157 113 0 0 chr17 63169338 63169621 -26334932 + AluSc SINE Alu 17 299 -10 4637 223 60 38 chr17 63169621 63171391 -26333162 + L1MC4 LINE L1 4818 6547 401 327 49 0 0 chr17 63171391 63171432 -26333121 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2294 114 3 0 chr17 63171435 63171743 -26332810 + AluSx SINE Alu 1 309 -3 4637 223 60 38 chr17 63171743 63171789 -26332764 + L1MC4 LINE L1 6548 5242 -904 477 0 0 0 chr17 63171789 63171842 -26332711 + (TA)n Simple_repeat Simple_repeat 2 54 0 4637 223 60 38 chr17 63171842 63172009 -26332544 + L1MC4 LINE L1 5241 5403 -743 359 282 191 0 chr17 63172040 63172171 -26332382 - LTR16A1 LTR ERVL -301 156 1 440 226 96 34 chr17 63173092 63173238 -26331315 - L2 LINE L2 -61 3252 3098 1327 145 128 35 chr17 63173242 63173560 -26330993 + MSTC LTR MaLR 1 416 -8 487 340 5 31 chr17 63173568 63173587 -26330966 - L2 LINE L2 -215 3098 3080 1846 154 26 32 chr17 63173587 63173899 -26330654 + AluJo SINE Alu 1 310 -2 487 340 5 31 chr17 63173899 63174070 -26330483 - L2 LINE L2 -233 3080 2913 3346 180 72 26 chr17 63174090 63174967 -26329586 - LTR28 LTR ERV1 0 1020 1 189 139 0 76 chr17 63175488 63175567 -26328986 + (TTTG)n Simple_repeat Simple_repeat 2 74 0 192 320 51 62 chr17 63175720 63175898 -26328655 + L2 LINE L2 2532 2707 -607 319 256 35 12 chr17 63175931 63176017 -26328536 + MLT1L LTR MaLR 193 280 -335 642 116 22 51 chr17 63176202 63176340 -26328213 + L1MB2 LINE L1 6038 6171 0 498 227 209 0 chr17 63176636 63176777 -26327776 - MER5A DNA MER1_type -9 180 6 2154 89 44 0 chr17 63176987 63177280 -26327273 + AluSg SINE Alu 1 306 -4 461 295 33 0 chr17 63177406 63177528 -26327025 + L3 LINE CR1 1360 1485 -92 426 307 160 0 chr17 63177526 63177676 -26326877 - MER5A DNA MER1_type -12 177 4 * 340 298 70 58 chr17 63177724 63177895 -26326658 + MER5A DNA MER1_type 17 189 0 390 314 72 10 chr17 63179438 63179632 -26324921 - MIR SINE MIR -44 218 13 25 0 0 0 chr17 63179749 63179774 -26324779 + AT_rich Low_complexity Low_complexity 1 25 0 717 185 26 16 chr17 63179829 63180018 -26324535 + L1MC3 LINE L1 7595 7785 0 742 128 0 0 chr17 63180431 63180586 -26323967 + AluSg/x SINE Alu 182 336 0 384 348 24 48 chr17 63181050 63181257 -26323296 - MIR3 SINE MIR -5 203 2 1857 148 46 0 chr17 63182005 63182288 -26322265 + AluJb SINE Alu 1 296 -16 213 132 0 0 chr17 63182970 63183008 -26321545 + (TG)n Simple_repeat Simple_repeat 2 39 0 1812 145 4 0 chr17 63184156 63184434 -26320119 - AluSx SINE Alu 0 305 27 301 248 94 26 chr17 63184472 63184589 -26319964 - MIR3 SINE MIR -34 174 50 250 56 481 0 chr17 63184777 63184831 -26319722 - MADE1 DNA Mariner 0 80 1 326 265 152 0 chr17 63185443 63185575 -26318978 - MIR3 SINE MIR -3 205 54 570 229 170 0 chr17 63186178 63186331 -26318222 + MER5A DNA MER1_type 4 182 -7 652 297 151 17 chr17 63186403 63186753 -26317800 - L2 LINE L2 -1 3271 2875 1015 156 11 5 chr17 63187378 63187564 -26316989 + L1MB2 LINE L1 5969 6155 -16 2115 113 72 0 chr17 63187588 63187880 -26316673 - AluSq SINE Alu 0 313 1 389 348 55 11 chr17 63189062 63189243 -26315310 - MIR3 SINE MIR -10 198 10 184 189 19 94 chr17 63189266 63189319 -26315234 + L2 LINE L2 3207 3290 -17 1756 198 79 9 chr17 63189545 63189975 -26314578 - MLT1C LTR MaLR -7 460 1 378 0 0 0 chr17 63190560 63190602 -26313951 + (CA)n Simple_repeat Simple_repeat 2 43 0 669 277 64 4 chr17 63190912 63191179 -26313374 - LTR16A1 LTR ERVL -12 445 163 480 294 134 5 chr17 63192582 63192938 -26311615 - L2 LINE L2 -262 3010 2553 602 211 70 7 chr17 63193353 63193495 -26311058 - MIR SINE MIR -88 174 24 1305 133 25 0 chr17 63193634 63193837 -26310716 + MER3 DNA MER1_type 2 209 0 269 333 29 0 chr17 63194253 63194355 -26310198 - MIR3 SINE MIR -15 193 89 426 211 83 0 chr17 63195277 63195410 -26309143 + MIR SINE MIR 70 213 -49 431 305 13 61 chr17 63196599 63196784 -26307769 + MIR SINE MIR 13 190 -63 359 322 105 7 chr17 63197238 63197390 -26307163 - L2 LINE L2 0 3272 3106 235 231 77 0 chr17 63197414 63197466 -26307087 + MER5A DNA MER1_type 21 76 -113 2378 109 0 0 chr17 63197466 63197778 -26306775 + AluSx SINE Alu 1 312 0 660 267 91 23 chr17 63198080 63198301 -26306252 + MIR SINE MIR 14 249 -13 841 239 107 49 chr17 63199194 63199212 -26305341 - L1ME4a LINE L1 -38 6083 6067 2448 81 0 7 chr17 63199212 63199522 -26305031 + AluSc SINE Alu 2 309 0 841 239 107 49 chr17 63199522 63199972 -26304581 - L1ME4a LINE L1 -54 6067 5588 1815 153 0 4 chr17 63200298 63200573 -26303980 + AluJo SINE Alu 1 274 -38 586 35 24 0 chr17 63200578 63200663 -26303890 + (TAGA)n Simple_repeat Simple_repeat 2 88 0 507 206 0 56 chr17 63201004 63201111 -26303442 - MIR SINE MIR -113 149 49 24 0 0 0 chr17 63201167 63201191 -26303362 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr17 63201910 63201945 -26302608 + AT_rich Low_complexity Low_complexity 1 35 0 2810 222 48 29 chr17 63202148 63202874 -26301679 - L1MD2 LINE L1 -21 6338 5599 237 75 0 94 chr17 63202877 63202895 -26301658 - Alu SINE Alu 0 302 284 1566 95 7 62 chr17 63202895 63203004 -26301549 - L1MA1 LINE L1 0 6562 6449 2301 90 0 45 chr17 63203004 63203316 -26301237 + AluSc SINE Alu 2 299 -10 1566 95 7 62 chr17 63203316 63203479 -26301074 - L1MA1 LINE L1 -113 6449 6305 237 75 0 94 chr17 63203479 63203513 -26301040 - Alu SINE Alu -18 284 255 1408 132 0 0 chr17 63203513 63203703 -26300850 - AluSq SINE Alu -123 190 1 5460 209 58 82 chr17 63203712 63206286 -26298267 - L1MA1 LINE L1 -251 6311 3675 2207 78 26 0 chr17 63206286 63206582 -26297971 - AluSc SINE Alu 0 303 1 5460 209 58 82 chr17 63206582 63208846 -26295707 - L1MA1 LINE L1 -2887 3675 1357 2165 102 0 11 chr17 63208846 63209162 -26295391 - AluSx SINE Alu 0 313 1 5460 209 58 82 chr17 63209162 63209926 -26294627 - L1MA1 LINE L1 -5205 1357 896 1995 147 7 3 chr17 63209926 63210218 -26294335 + AluSx SINE Alu 1 293 -19 5460 209 58 82 chr17 63210218 63210429 -26294124 - L1MA1 LINE L1 -5666 896 681 23 0 0 0 chr17 63210635 63210658 -26293895 + AT_rich Low_complexity Low_complexity 1 23 0 480 305 113 0 chr17 63210909 63211086 -26293467 + MER117 DNA MER1_type 1 197 0 851 264 28 9 chr17 63211507 63211719 -26292834 + MIR SINE MIR 47 262 0 2023 154 0 10 chr17 63212043 63212354 -26292199 - AluJb SINE Alu -4 308 1 1845 145 23 20 chr17 63212922 63213225 -26291328 - AluJo SINE Alu -8 304 1 598 221 30 8 chr17 63213459 63213590 -26290963 + MIR SINE MIR 36 169 -93 323 284 71 35 chr17 63214767 63214908 -26289645 + L2 LINE L2 3167 3312 -1 305 313 18 0 chr17 63215452 63215564 -26288989 + MIR SINE MIR 33 146 -62 257 303 15 0 chr17 63215994 63216060 -26288493 + L2 LINE L2 3205 3271 -1 316 222 34 111 chr17 63216544 63216661 -26287892 + L2 LINE L2 3147 3254 -18 604 248 38 0 chr17 63216711 63216844 -26287709 - MIR SINE MIR -123 139 2 300 211 35 0 chr17 63217686 63217743 -26286810 + MER91A DNA MER1_type 126 184 -12 546 279 76 13 chr17 63218754 63218912 -26285641 + MIR SINE MIR 6 173 -89 438 234 18 27 chr17 63220332 63220443 -26284110 + MIR SINE MIR 64 173 -89 192 290 166 21 chr17 63220477 63220622 -26283931 + L2 LINE L2 3098 3263 -9 396 40 0 0 chr17 63220817 63220867 -26283686 + (TG)n Simple_repeat Simple_repeat 2 51 0 1977 167 0 0 chr17 63221007 63221318 -26283235 + AluJb SINE Alu 1 311 -1 2496 72 3 0 chr17 63221326 63221632 -26282921 - AluY SINE Alu -4 307 1 23 0 0 0 chr17 63221633 63221656 -26282897 + AT_rich Low_complexity Low_complexity 1 23 0 354 226 24 38 chr17 63221855 63221969 -26282584 - MIR SINE MIR -27 181 65 604 262 7 0 chr17 63222630 63222779 -26281774 - MER117 DNA MER1_type -18 179 30 2176 129 0 3 chr17 63223296 63223591 -26280962 + AluSg SINE Alu 1 294 -16 882 207 56 15 chr17 63223724 63223922 -26280631 + MER3 DNA MER1_type 1 206 -3 268 257 18 18 chr17 63224884 63224993 -26279560 + CT-rich Low_complexity Low_complexity 2 110 0 1429 63 111 210 chr17 63227590 63227924 -26276629 - AluSq SINE Alu -2 301 1 2119 86 52 14 chr17 63228759 63229049 -26275504 - AluSg SINE Alu -9 301 1 765 289 71 20 chr17 63229481 63229930 -26274623 - L1ME4a LINE L1 -164 5957 5486 472 239 80 43 chr17 63229962 63230125 -26274428 - MIR3 SINE MIR -19 189 21 656 315 88 20 chr17 63230210 63230515 -26274038 - L2 LINE L2 -4 3268 2943 779 85 78 64 chr17 63231980 63232121 -26272432 - FRAM SINE Alu 0 176 34 2257 79 0 24 chr17 63232244 63232582 -26271971 + AluSq SINE Alu 1 331 0 2267 132 0 0 chr17 63232676 63232979 -26271574 + AluSx SINE Alu 1 303 -9 2335 109 0 3 chr17 63232981 63233284 -26271269 + AluSx SINE Alu 3 304 -8 1728 168 7 37 chr17 63233291 63233588 -26270965 + AluJo SINE Alu 3 290 -22 530 305 65 48 chr17 63233695 63234558 -26269995 - L1ME4a LINE L1 -743 5403 4526 612 162 90 0 chr17 63234568 63234679 -26269874 - L2 LINE L2 0 3313 3193 336 262 98 8 chr17 63234691 63234813 -26269740 - L1ME4a LINE L1 -1631 4515 4383 2467 79 3 0 chr17 63234907 63235212 -26269341 - AluY SINE Alu 0 311 6 991 192 6 12 chr17 63235218 63235390 -26269163 - FAM SINE Alu -4 171 1 2191 128 0 0 chr17 63235543 63235839 -26268714 - AluSg SINE Alu -14 296 1 2299 97 0 3 chr17 63235870 63236160 -26268393 + AluSg SINE Alu 1 289 -21 445 315 70 26 chr17 63236496 63236766 -26267787 + L1MC4a LINE L1 5567 5848 -1960 341 303 17 117 chr17 63236819 63237119 -26267434 + L1ME4a LINE L1 5852 6121 0 2021 129 0 64 chr17 63237253 63237361 -26267192 + AluSx SINE Alu 7 120 -192 2333 89 0 7 chr17 63237361 63237654 -26266899 - AluSp SINE Alu -17 296 6 2021 129 0 64 chr17 63237654 63237871 -26266682 + AluSx SINE Alu 120 311 -1 2165 223 30 57 chr17 63237881 63238546 -26266007 + L1M4 LINE L1 3964 4610 -1536 275 294 27 48 chr17 63238553 63238699 -26265854 + L1ME LINE L1 7 149 -5921 2531 219 97 54 chr17 63239172 63240298 -26264255 + L1M3d LINE L1 1488 2627 -3913 2141 136 0 3 chr17 63240298 63240593 -26263960 - AluSx SINE Alu -18 294 1 2531 219 97 54 chr17 63240593 63240953 -26263600 + L1M3d LINE L1 2627 2970 -3570 1246 157 0 37 chr17 63240993 63241209 -26263344 - AluJo SINE Alu -104 208 1 322 332 32 21 chr17 63242018 63242205 -26262348 - MIR3 SINE MIR -6 202 14 2328 88 0 0 chr17 63242527 63242824 -26261729 + AluSg SINE Alu 1 297 -13 5006 213 54 38 chr17 63242919 63243269 -26261284 + L1M3d LINE L1 2966 3309 -3231 2108 113 3 0 chr17 63243269 63243574 -26260979 + AluSx SINE Alu 1 306 0 5006 213 54 38 chr17 63243574 63244191 -26260362 + L1M3d LINE L1 3309 3915 -2625 2313 98 0 3 chr17 63244191 63244496 -26260057 + AluSx SINE Alu 1 304 -8 5006 213 54 38 chr17 63244496 63245271 -26259282 + L1M3d LINE L1 3915 4737 -1803 1674 152 7 7 chr17 63245281 63245571 -26258982 + MER70A LTR ERVL 1 290 -182 256 296 20 0 chr17 63245611 63245709 -26258844 - L1 LINE L1 -2199 3947 3848 1838 180 3 6 chr17 63245783 63246094 -26258459 + AluJo SINE Alu 1 310 -2 372 309 36 40 chr17 63246278 63246698 -26257855 - L1MEd LINE L1 -4865 1254 837 301 321 25 68 chr17 63247268 63247430 -26257123 - L1MEd LINE L1 -5947 172 18 399 282 68 37 chr17 63248444 63248607 -26255946 + MIR3 SINE MIR 41 208 0 222 226 118 59 chr17 63249095 63249197 -26255356 + MIR3 SINE MIR 7 114 -94 1106 133 12 0 chr17 63250117 63250282 -26254271 - AluJb SINE Alu -12 300 134 990 247 30 0 chr17 63253769 63254000 -26250553 - MIR SINE MIR -22 240 3 291 93 0 0 chr17 63255700 63255743 -26248810 + (TCC)n Simple_repeat Simple_repeat 1 43 0 306 73 0 0 chr17 63256505 63256546 -26248007 + (TCC)n Simple_repeat Simple_repeat 3 43 0 239 231 0 0 chr17 63257789 63257841 -26246712 - MIR SINE MIR -32 230 179 391 252 195 9 chr17 63259405 63259553 -26245000 - MER5A DNA MER1_type 0 189 7 342 268 114 16 chr17 63259625 63259748 -26244805 + L1MC5 LINE L1 7804 7938 -23 1828 159 17 0 chr17 63259800 63260096 -26244457 + AluJb SINE Alu 1 301 -11 1452 205 138 29 chr17 63260743 63261192 -26243361 + MLT1D LTR MaLR 1 498 -7 555 16 0 0 chr17 63262360 63262424 -26242129 + (TGGA)n Simple_repeat Simple_repeat 2 65 0 1848 161 3 0 chr17 63263385 63263706 -26240847 + AluJo SINE Alu 2 312 0 554 274 147 11 chr17 63264195 63264385 -26240168 - MIR SINE MIR 0 262 47 488 329 72 13 chr17 63265044 63265281 -26239272 - MIR SINE MIR -10 252 2 274 307 20 20 chr17 63265411 63265512 -26239041 + MIR SINE MIR 41 141 -67 358 290 14 22 chr17 63267077 63267215 -26237338 + GA-rich Low_complexity Low_complexity 2 138 0 1372 294 141 27 chr17 63267313 63267767 -26236786 + L2 LINE L2 2019 2419 -894 2262 103 0 0 chr17 63267767 63268067 -26236486 - AluSx SINE Alu -12 300 1 1372 294 141 27 chr17 63268067 63268727 -26235826 + L2 LINE L2 2419 3313 0 191 295 124 9 chr17 63268934 63269039 -26235514 - MIR3 SINE MIR -15 193 77 23 68 0 0 chr17 63270921 63270965 -26233588 + GC_rich Low_complexity Low_complexity 1 44 0 195 296 37 0 chr17 63271672 63271726 -26232827 - MIR SINE MIR -3 259 204 213 282 7 21 chr17 63274846 63274988 -26229565 + (TG)n Simple_repeat Simple_repeat 1 140 0 190 0 67 0 chr17 63275295 63275325 -26229228 + (TCC)n Simple_repeat Simple_repeat 1 32 0 225 275 53 30 chr17 63275578 63275709 -26228844 + (CAGAGA)n Simple_repeat Simple_repeat 5 138 0 227 225 12 25 chr17 63276626 63276706 -26227847 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 230 278 0 0 chr17 63277957 63278011 -26226542 + C-rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr17 63279069 63279090 -26225463 + GC_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr17 63279102 63279122 -26225431 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 285 239 11 45 chr17 63280540 63280628 -26223925 + MIR SINE MIR 19 103 -105 317 349 30 60 chr17 63283509 63283675 -26220878 + MIR3 SINE MIR 5 165 -43 342 284 34 0 chr17 63284119 63284207 -26220346 - MIR SINE MIR -70 192 102 300 325 100 0 chr17 63285118 63285238 -26219315 + MIR SINE MIR 86 217 -45 258 300 100 0 chr17 63286496 63286576 -26217977 + MIR3 SINE MIR 111 198 -10 829 167 16 0 chr17 63286967 63287093 -26217460 + FLAM_A SINE Alu 1 128 -5 201 154 0 0 chr17 63287099 63287138 -26217415 + A-rich Low_complexity Low_complexity 2 40 0 1313 197 78 41 chr17 63287190 63287485 -26217068 + AluJo SINE Alu 1 306 -6 1975 142 3 10 chr17 63287711 63288014 -26216539 - AluJb SINE Alu -11 301 1 272 212 152 10 chr17 63288020 63288119 -26216434 - L1ME3A LINE L1 -5 6165 6053 1989 147 3 10 chr17 63288124 63288438 -26216115 + AluJb SINE Alu 1 312 0 307 138 15 15 chr17 63288440 63288505 -26216048 + GA-rich Low_complexity Low_complexity 3 67 0 258 245 78 0 chr17 63288505 63288607 -26215946 - L1ME3A LINE L1 -114 6056 5947 2107 100 0 4 chr17 63289276 63289557 -26214996 - AluSg SINE Alu -30 280 1 346 248 72 32 chr17 63289557 63289682 -26214871 + MIR SINE MIR 97 226 -36 1803 147 27 7 chr17 63289683 63289976 -26214577 - AluJb SINE Alu -12 300 2 1950 148 27 7 chr17 63292912 63293209 -26211344 + AluJo SINE Alu 1 303 -9 830 125 0 0 chr17 63293319 63293439 -26211114 + FLAM_A SINE Alu 18 137 -5 696 256 126 9 chr17 63293440 63293655 -26210898 + MIR SINE MIR 23 262 0 270 268 0 37 chr17 63294549 63294631 -26209922 + MIR SINE MIR 178 256 -6 189 204 0 82 chr17 63294750 63294799 -26209754 - L2 LINE L2 -7 3306 3262 188 369 68 0 chr17 63295103 63295206 -26209347 + L2 LINE L2 2888 2997 -275 3692 168 88 15 chr17 63295315 63295674 -26208879 + L1MB3 LINE L1 5255 5586 -597 1333 203 248 0 chr17 63295674 63296009 -26208544 + MER47B DNA MER2_type 1 418 0 3692 168 88 15 chr17 63296009 63296469 -26208084 + L1MB3 LINE L1 5586 6134 -49 1731 82 82 13 chr17 63296470 63296701 -26207852 + AluSq SINE Alu 1 247 -66 2333 68 4 0 chr17 63296701 63297011 -26207542 + AluSg SINE Alu 1 311 0 2282 112 3 3 chr17 63297023 63297327 -26207226 + AluSq SINE Alu 1 304 -9 723 171 57 13 chr17 63297395 63297553 -26207000 - MER33 DNA MER1_type -151 173 9 800 178 99 7 chr17 63297589 63297741 -26206812 + FRAM SINE Alu 1 166 0 26 0 0 0 chr17 63298882 63298908 -26205645 + GC_rich Low_complexity Low_complexity 1 26 0 297 175 258 21 chr17 63299760 63299857 -26204696 - MIR SINE MIR -56 206 87 229 289 53 91 chr17 63301979 63302187 -26202366 - L2 LINE L2 -385 2929 2730 185 310 17 0 chr17 63302413 63302471 -26202082 - L2 LINE L2 -786 2528 2470 188 340 0 0 chr17 63302637 63302687 -26201866 + L2 LINE L2 3200 3249 -23 2386 111 0 0 chr17 63303356 63303663 -26200890 - AluSx SINE Alu -5 307 1 463 248 0 38 chr17 63305548 63305653 -26198900 - MER91B DNA MER1_type 0 190 90 2299 58 3 27 chr17 63305785 63306103 -26198450 + AluY SINE Alu 1 311 0 2472 76 3 13 chr17 63306115 63306430 -26198123 + AluSp SINE Alu 2 313 0 205 219 12 146 chr17 63306437 63306519 -26198034 + MER91 DNA MER1_type 70 140 0 387 284 98 27 chr17 63306882 63307065 -26197488 + MIR SINE MIR 60 255 -7 2560 237 82 14 chr17 63307646 63308393 -26196160 + L2 LINE L2 2275 3069 -244 1058 94 138 25 chr17 63308396 63308587 -26195966 + AluSg/x SINE Alu 104 312 0 805 220 50 58 chr17 63308602 63308843 -26195710 + L2 LINE L2 3075 3313 0 383 252 148 22 chr17 63309513 63309648 -26194905 - MIR3 SINE MIR -22 186 35 198 327 0 0 chr17 63309615 63309667 -26194886 + MIR3 SINE MIR 143 194 -14 * 201 363 66 0 chr17 63310311 63310402 -26194151 - L2 LINE L2 -12 3260 3164 920 240 32 18 chr17 63313059 63313280 -26191273 + MIR SINE MIR 39 262 0 1200 119 0 0 chr17 63313302 63313462 -26191091 - AluSg/x SINE Alu -19 291 132 2225 96 3 42 chr17 63313462 63313774 -26190779 - AluSg SINE Alu -10 300 1 636 266 73 16 chr17 63313796 63313988 -26190565 - MIR SINE MIR -48 214 12 222 238 36 71 chr17 63314060 63314144 -26190409 - L2 LINE L2 -680 2634 2554 722 245 41 53 chr17 63314338 63314583 -26189970 - MIR SINE MIR 0 262 21 2336 87 3 10 chr17 63314735 63315033 -26189520 + AluSx SINE Alu 1 296 -16 1319 113 0 0 chr17 63315033 63315210 -26189343 + AluSg/x SINE Alu 132 308 -2 348 64 0 0 chr17 63315535 63315582 -26188971 + (CA)n Simple_repeat Simple_repeat 1 47 0 576 344 22 22 chr17 63316118 63316345 -26188208 + MIR SINE MIR 36 262 0 487 287 79 65 chr17 63316394 63316530 -26188023 - Charlie8 DNA MER1_type -56 285 152 2582 70 0 0 chr17 63316530 63316832 -26187721 - AluY SINE Alu -4 307 6 487 287 79 65 chr17 63316832 63316974 -26187579 - Charlie8 DNA MER1_type -189 152 3 380 292 87 75 chr17 63319031 63319353 -26185200 - L2 LINE L2 -23 3249 2924 2004 102 0 3 chr17 63319995 63320290 -26184263 - L1MA2 LINE L1 -1 6303 6010 1005 199 5 0 chr17 63320470 63320656 -26183897 - MIR SINE MIR -11 251 65 1069 328 78 41 chr17 63320811 63320852 -26183701 + L2 LINE L2 2115 2153 -1161 2367 114 0 0 chr17 63320852 63321160 -26183393 - AluSg SINE Alu -2 308 1 1069 328 78 41 chr17 63321160 63321902 -26182651 + L2 LINE L2 2153 2927 -387 233 208 0 0 chr17 63322003 63322051 -26182502 + L2 LINE L2 3262 3309 -4 22 0 0 0 chr17 63322838 63322860 -26181693 + AT_rich Low_complexity Low_complexity 1 22 0 538 294 154 0 chr17 63323546 63323747 -26180806 + MIR SINE MIR 31 262 0 1998 121 4 0 chr17 63324712 63325009 -26179544 - AluJb SINE Alu 0 315 18 21 0 0 0 chr17 63325014 63325035 -26179518 + AT_rich Low_complexity Low_complexity 1 21 0 275 268 186 10 chr17 63328709 63328806 -26175747 + L2 LINE L2 3151 3264 -8 1746 171 0 40 chr17 63329750 63330072 -26174481 - AluJo SINE Alu -3 309 1 2183 85 46 23 chr17 63330082 63330387 -26174166 - AluSp SINE Alu -1 312 1 219 314 131 53 chr17 63331512 63331964 -26172589 + L2 LINE L2 1992 2478 -836 235 342 103 38 chr17 63331982 63332166 -26172387 + L2 LINE L2 2609 2804 -510 314 318 138 26 chr17 63332217 63332294 -26172259 + MIR SINE MIR 47 114 -148 1714 196 26 10 chr17 63332294 63332600 -26171953 + AluJo SINE Alu 1 311 -1 314 318 138 26 chr17 63332600 63332615 -26171938 + MIR SINE MIR 114 126 -136 2269 105 10 3 chr17 63332615 63332920 -26171633 + AluSg SINE Alu 1 307 -3 314 318 138 26 chr17 63332920 63333015 -26171538 + MIR SINE MIR 126 256 -6 913 117 0 51 chr17 63333285 63333422 -26171131 - FLAM_C SINE Alu -3 130 1 217 228 35 18 chr17 63333468 63333525 -26171028 + L2 LINE L2 3253 3310 -3 2331 96 0 29 chr17 63333838 63334152 -26170401 + AluSx SINE Alu 1 305 -7 335 372 122 19 chr17 63335401 63335936 -26168617 - L2 LINE L2 -470 2844 2255 225 257 0 71 chr17 63335909 63335979 -26168574 + MER5A DNA MER1_type 125 189 0 * 232 269 65 43 chr17 63337489 63337582 -26166971 + L2 LINE L2 3157 3251 -21 2083 150 100 18 chr17 63339415 63339595 -26164958 + Tigger2a DNA MER2_type 1 165 -2543 2145 127 3 0 chr17 63339595 63339887 -26164666 + AluSq SINE Alu 1 293 -20 2083 150 100 18 chr17 63339887 63340107 -26164446 + Tigger2a DNA MER2_type 165 434 0 2546 50 0 7 chr17 63340242 63340539 -26164014 + AluY SINE Alu 1 295 -16 2309 100 0 7 chr17 63343848 63344149 -26160404 + AluSq SINE Alu 1 299 -14 3483 68 16 0 chr17 63344157 63344595 -26159958 + LTR56 LTR ERV1 1 445 0 21 0 0 0 chr17 63344924 63344945 -26159608 + AT_rich Low_complexity Low_complexity 1 21 0 2346 101 0 0 chr17 63346113 63346409 -26158144 - AluSg SINE Alu -14 296 1 328 300 27 18 chr17 63347018 63347128 -26157425 - MIR SINE MIR -105 157 47 185 348 0 54 chr17 63350563 63350655 -26153898 + MIR SINE MIR 17 103 -105 295 255 143 0 chr17 63350777 63350875 -26153678 - MIR3 SINE MIR -1 207 96 2644 58 0 0 chr17 63351535 63351844 -26152709 - AluY SINE Alu 0 311 3 802 176 15 15 chr17 63352002 63352138 -26152415 + FRAM SINE Alu 1 136 -40 615 27 0 0 chr17 63352170 63352243 -26152310 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 212 244 167 0 chr17 63352844 63352922 -26151631 + MIR3 SINE MIR 113 203 -5 2215 136 0 3 chr17 63353539 63353849 -26150704 - AluSx SINE Alu -3 309 1 512 260 31 63 chr17 63355279 63355502 -26149051 - L2 LINE L2 -4 3309 3094 825 131 33 0 chr17 63356020 63356142 -26148411 - FLAM_C SINE Alu -7 126 1 1134 197 0 5 chr17 63356164 63356377 -26148176 + AluJb SINE Alu 93 304 -8 502 206 95 85 chr17 63357436 63357625 -26146928 + MIR SINE MIR 20 210 -52 224 299 0 143 chr17 63357654 63357801 -26146752 - MIR3 SINE MIR -51 157 32 180 318 55 36 chr17 63359629 63359739 -26144814 + L3 LINE CR1 316 427 -1150 511 137 53 0 chr17 63365011 63365106 -26139447 + L1MB2 LINE L1 6070 6169 -2 276 184 66 13 chr17 63365117 63365193 -26139360 + MIR SINE MIR 129 208 -54 836 179 83 0 chr17 63365315 63365471 -26139082 - AluJb SINE Alu -7 305 137 2113 33 4 0 chr17 63365474 63365716 -26138837 - AluY SINE Alu -11 300 58 2285 89 0 32 chr17 63365836 63366150 -26138403 + AluSx SINE Alu 1 304 -8 326 332 146 32 chr17 63367558 63367935 -26136618 - L2 LINE L2 -640 2674 2255 221 257 0 71 chr17 63367908 63367978 -26136575 + MER5A DNA MER1_type 125 189 0 * 228 269 65 43 chr17 63369488 63369581 -26134972 + L2 LINE L2 3157 3251 -21 2242 147 100 18 chr17 63371414 63371594 -26132959 + Tigger2a DNA MER2_type 1 165 -2543 2127 123 3 0 chr17 63371594 63371886 -26132667 + AluSq SINE Alu 1 293 -20 2242 147 100 18 chr17 63371886 63372106 -26132447 + Tigger2a DNA MER2_type 165 434 0 2653 40 0 7 chr17 63372241 63372545 -26132008 + AluY SINE Alu 1 302 -9 2225 126 0 10 chr17 63372555 63372865 -26131688 + AluSx SINE Alu 1 307 -5 5464 193 13 30 chr17 63372865 63372973 -26131580 + L1M2 LINE L1 2257 2365 -3781 2452 84 3 0 chr17 63372973 63373269 -26131284 + AluSp SINE Alu 1 297 -16 5464 193 13 30 chr17 63373269 63373308 -26131245 + L1M2 LINE L1 2365 2403 -3743 2285 98 3 0 chr17 63373308 63373595 -26130958 + AluSq SINE Alu 1 288 -25 5464 193 13 30 chr17 63373595 63374472 -26130081 + L1M2 LINE L1 2403 3258 -2888 1621 162 36 23 chr17 63374472 63374780 -26129773 + AluJo SINE Alu 1 312 0 5464 193 13 30 chr17 63374780 63375026 -26129527 + L1M2 LINE L1 3258 3507 -2639 938 172 0 0 chr17 63375029 63375174 -26129379 + AluJ SINE Alu 1 145 -167 407 191 0 12 chr17 63375174 63375258 -26129295 + SVA Other Other 445 527 -859 1040 186 0 0 chr17 63375382 63375554 -26128999 + AluJ SINE Alu 129 300 -12 2530 137 37 14 chr17 63375554 63375813 -26128740 + L1M2 LINE L1 3500 3775 -2371 2013 128 0 14 chr17 63375813 63376136 -26128417 + AluSp SINE Alu 1 319 0 2530 137 37 14 chr17 63376136 63376307 -26128246 + L1M2 LINE L1 3775 3941 -2205 2080 90 7 21 chr17 63376308 63376597 -26127956 + AluSx SINE Alu 1 285 -27 1207 22 0 0 chr17 63376599 63376734 -26127819 + SVA Other Other 1249 1383 -3 191 103 26 0 chr17 63376740 63376779 -26127774 + A-rich Low_complexity Low_complexity 3 42 0 8458 141 20 18 chr17 63376779 63378616 -26125937 + L1M2 LINE L1 3926 5780 -520 331 215 63 0 chr17 63379258 63379337 -26125216 + MIR SINE MIR 50 133 -75 317 65 0 0 chr17 63379849 63379895 -26124658 - Alu SINE Alu 0 300 255 360 68 96 0 chr17 63380011 63380084 -26124469 - L1MCa LINE L1 -4039 2387 2308 2114 131 30 0 chr17 63380111 63380409 -26124144 - AluSc SINE Alu -2 307 1 2143 113 0 19 chr17 63380413 63380732 -26123821 - AluSq SINE Alu 0 313 1 684 208 8 0 chr17 63380741 63380866 -26123687 - FLAM_A SINE Alu -7 126 1 697 139 52 0 chr17 63380867 63380982 -26123571 - L1MC/D LINE L1 -586 5758 5638 446 95 0 0 chr17 63380984 63381047 -26123506 + AluSp/q SINE Alu 244 306 -7 1223 119 0 0 chr17 63381051 63381211 -26123342 + AluSx SINE Alu 1 160 -152 711 173 30 0 chr17 63381312 63381445 -26123108 + MLT1A1 LTR MaLR 229 365 0 253 186 0 0 chr17 63381515 63381558 -26122995 - MIR3 SINE MIR -54 154 112 292 246 203 62 chr17 63381841 63382146 -26122407 + LTR16C LTR ERVL 138 485 -6 1987 142 0 22 chr17 63382661 63382977 -26121576 + AluJb SINE Alu 1 309 -3 2239 97 7 0 chr17 63383121 63383410 -26121143 + AluY SINE Alu 1 291 -20 27 29 0 0 chr17 63383410 63383444 -26121109 + AT_rich Low_complexity Low_complexity 1 34 0 232 250 125 12 chr17 63383526 63383606 -26120947 - MER34B LTR ERV1 0 565 477 573 167 208 17 chr17 63383750 63383870 -26120683 - FLAM_C SINE Alu 0 143 1 2358 72 0 33 chr17 63383914 63384221 -26120332 - AluSx SINE Alu -15 297 1 2071 139 0 3 chr17 63384228 63384523 -26120030 - AluSg SINE Alu -16 294 1 1757 57 0 9 chr17 63384646 63384858 -26119695 - AluSg/x SINE Alu -2 307 98 465 34 0 0 chr17 63386013 63386072 -26118481 + (TG)n Simple_repeat Simple_repeat 2 60 0 1554 153 0 19 chr17 63386370 63386632 -26117921 + AluJb SINE Alu 2 258 -54 1883 149 18 20 chr17 63386632 63386975 -26117578 + L1MB4 LINE L1 5813 6154 -26 1263 153 12 132 chr17 63387006 63387333 -26117220 - AluJo SINE Alu -12 290 3 276 214 61 41 chr17 63387818 63387916 -26116637 + MIR SINE MIR 48 147 -61 405 270 61 18 chr17 63388459 63388622 -26115931 - L2 LINE L2 -219 3053 2884 32 43 0 0 chr17 63389350 63389396 -26115157 + AT_rich Low_complexity Low_complexity 1 46 0 326 307 39 0 chr17 63389473 63389600 -26114953 + L1MA8 LINE L1 6113 6244 -47 289 175 50 25 chr17 63390246 63390326 -26114227 + MIR SINE MIR 129 210 -52 183 288 63 9 chr17 63390854 63390965 -26113588 + MIR3 SINE MIR 10 126 -82 313 263 50 106 chr17 63390983 63391143 -26113410 - L1M2 LINE L1 -5879 970 820 518 286 79 6 chr17 63391348 63391526 -26113027 - L2 LINE L2 -1 3312 3122 2096 72 15 8 chr17 63391646 63391930 -26112623 + AluSx SINE Alu 19 304 0 1529 115 0 47 chr17 63392200 63392435 -26112118 - AluSg/x SINE Alu -6 306 83 244 287 132 37 chr17 63392671 63392807 -26111746 + MIR SINE MIR 1 149 -113 1623 129 0 0 chr17 63392856 63393073 -26111480 + AluSx SINE Alu 1 217 -95 186 267 83 0 chr17 63393277 63393337 -26111216 - L2 LINE L2 -541 2773 2709 * 261 338 55 21 chr17 63393325 63393470 -26111083 - MIR SINE MIR -65 197 48 1735 163 27 33 chr17 63393614 63393792 -26110761 - AluJo SINE Alu -10 302 125 234 0 0 0 chr17 63393792 63393818 -26110735 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1735 163 27 33 chr17 63393818 63393939 -26110614 - AluJo SINE Alu -187 125 5 465 311 66 69 chr17 63393960 63394397 -26110156 - L2 LINE L2 0 3272 2837 276 276 26 0 chr17 63394603 63394679 -26109874 + GA-rich Low_complexity Low_complexity 3 80 0 468 258 0 24 chr17 63395121 63395245 -26109308 - MIR SINE MIR -129 133 13 207 100 0 0 chr17 63395390 63395420 -26109133 + (TC)n Simple_repeat Simple_repeat 1 30 0 1633 144 21 103 chr17 63395450 63395789 -26108764 - AluJb SINE Alu -1 311 1 1119 61 0 0 chr17 63396095 63396227 -26108326 - AluSg/x SINE Alu -13 299 168 431 133 24 12 chr17 63396241 63396324 -26108229 + LTR25 LTR ERV1 25 108 -686 1338 48 30 6 chr17 63396324 63396489 -26108064 - AluSq SINE Alu -144 169 1 350 73 0 0 chr17 63396501 63396556 -26107997 - Alu SINE Alu 0 300 246 875 298 42 11 chr17 63396772 63397057 -26107496 + AluY SINE Alu 6 299 -12 260 290 84 9 chr17 63398311 63398418 -26106135 - MIR SINE MIR -28 234 120 2049 123 0 0 chr17 63398435 63398711 -26105842 + AluSx SINE Alu 1 276 -36 311 320 105 28 chr17 63399768 63399949 -26104604 - L2 LINE L2 -555 2759 2565 917 146 26 36 chr17 63400083 63400275 -26104278 + MER20 DNA MER1_type 30 219 0 1722 154 43 7 chr17 63400666 63400946 -26103607 - AluJb SINE Alu -17 295 6 1944 139 9 22 chr17 63401196 63401512 -26103041 + AluSx SINE Alu 1 312 0 2090 197 101 32 chr17 63401984 63402491 -26102062 + MLT1F LTR MaLR 1 542 0 319 356 17 8 chr17 63402495 63402613 -26101940 - MIR3 SINE MIR -20 188 70 210 250 83 0 chr17 63402745 63402793 -26101760 + L2 LINE L2 3207 3258 -14 257 301 54 0 chr17 63403084 63403177 -26101376 - MER94 DNA DNA -35 99 2 1889 120 48 10 chr17 63403753 63404044 -26100509 + AluSx SINE Alu 1 302 -10 307 318 78 47 chr17 63404217 63404346 -26100207 - L2 LINE L2 -22 3250 3118 968 204 0 6 chr17 63404545 63404726 -26099827 - AluJb SINE Alu 0 312 133 2324 83 17 3 chr17 63404727 63405017 -26099536 - AluSx SINE Alu -18 294 1 214 284 91 34 chr17 63405017 63405105 -26099448 - L2 LINE L2 -597 2717 2625 360 295 29 36 chr17 63406156 63406295 -26098258 - MIR3 SINE MIR -6 202 65 2223 97 31 0 chr17 63406392 63406681 -26097872 + AluSx SINE Alu 1 298 -14 671 235 34 0 chr17 63406698 63406847 -26097706 + MIR SINE MIR 97 250 -12 279 0 0 0 chr17 63407409 63407440 -26097113 + (CA)n Simple_repeat Simple_repeat 2 32 0 225 192 96 41 chr17 63407457 63407530 -26097023 - MIR SINE MIR -80 182 106 223 150 50 0 chr17 63407879 63407919 -26096634 + MER5B DNA MER1_type 7 48 -130 498 209 0 26 chr17 63407948 63408101 -26096452 + GA-rich Low_complexity Low_complexity 3 151 0 2030 80 3 38 chr17 63408229 63408516 -26096037 + AluY SINE Alu 1 277 -34 2457 102 0 3 chr17 63408555 63408869 -26095684 - AluSq SINE Alu 0 313 1 276 30 0 0 chr17 63408928 63408961 -26095592 + U2 snRNA snRNA 1 33 -155 311 197 2 0 chr17 63408976 63409047 -26095506 - L1MC/D LINE L1 -297 5824 5757 268 315 1 102 chr17 63409047 63409175 -26095378 + MER5A DNA MER1_type 45 152 -26 2322 110 0 16 chr17 63409344 63409662 -26094891 - AluSq SINE Alu 0 313 1 375 165 45 113 chr17 63409894 63409961 -26094592 + Charlie8 DNA MER1_type 38 93 -237 2098 125 0 26 chr17 63409961 63410274 -26094279 - AluY SINE Alu -5 306 2 375 165 45 113 chr17 63410274 63410339 -26094214 + Charlie8 DNA MER1_type 93 161 -169 2372 97 0 13 chr17 63410511 63410820 -26093733 + AluSx SINE Alu 1 305 -7 1925 135 48 0 chr17 63410827 63411116 -26093437 + AluSx SINE Alu 1 303 -9 197 269 185 76 chr17 63411376 63411495 -26093058 + MIR3 SINE MIR 40 171 -37 2279 113 3 0 chr17 63411716 63412017 -26092536 + AluSx SINE Alu 1 302 -10 836 114 38 30 chr17 63412149 63412280 -26092273 - FLAM_C SINE Alu 0 133 2 337 227 59 42 chr17 63412346 63412465 -26092088 + L1ME4a LINE L1 5963 6083 -38 2228 112 0 13 chr17 63412529 63412658 -26091895 + AluSg SINE Alu 6 135 -175 2306 112 0 0 chr17 63412658 63412963 -26091590 + AluY SINE Alu 1 305 -6 2228 112 0 13 chr17 63412963 63413136 -26091417 + AluSg SINE Alu 135 304 -6 1984 134 20 3 chr17 63413406 63413705 -26090848 + AluSg SINE Alu 1 304 -6 2477 66 0 34 chr17 63413770 63414090 -26090463 + AluY SINE Alu 1 309 -2 2317 101 0 16 chr17 63414347 63414664 -26089889 - AluSx SINE Alu 0 312 1 245 119 0 0 chr17 63414673 63414715 -26089838 - Alu SINE Alu -3 299 258 422 311 107 15 chr17 63414770 63414976 -26089577 - L2 LINE L2 -862 2452 2228 519 221 149 108 chr17 63415147 63415396 -26089157 - L2 LINE L2 0 3272 3014 837 95 0 0 chr17 63415599 63415704 -26088849 + AluSp/q SINE Alu 176 280 -33 188 35 35 0 chr17 63415706 63415735 -26088818 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 235 251 227 37 chr17 63416275 63416438 -26088115 + MIR SINE MIR 20 213 -49 1675 131 0 35 chr17 63416444 63416703 -26087850 + AluSg SINE Alu 1 250 -60 1259 180 12 57 chr17 63416803 63416900 -26087653 - AluJo SINE Alu -79 233 133 2244 121 0 3 chr17 63416900 63417206 -26087347 - AluSx SINE Alu -7 305 1 1259 180 12 57 chr17 63417206 63417352 -26087201 - AluJo SINE Alu -179 133 1 316 234 0 0 chr17 63418146 63418210 -26086343 + MIR SINE MIR 84 147 -115 2296 96 7 0 chr17 63418763 63419055 -26085498 - AluSx SINE Alu -18 294 1 416 276 123 29 chr17 63419145 63419388 -26085165 - MLT1J2 LTR MaLR -163 287 22 422 228 55 55 chr17 63419762 63419907 -26084646 + L2 LINE L2 3167 3311 -2 1021 121 0 0 chr17 63420116 63420248 -26084305 + AluSp SINE Alu 1 132 -181 2540 55 0 0 chr17 63420250 63420541 -26084012 + AluY SINE Alu 1 291 -20 1950 143 20 10 chr17 63421069 63421226 -26083327 - AluJb SINE Alu -16 296 133 2455 81 0 0 chr17 63421226 63421523 -26083030 - AluY SINE Alu -14 297 1 1950 143 20 10 chr17 63421523 63421658 -26082895 - AluJb SINE Alu -179 133 1 655 207 89 7 chr17 63421677 63421812 -26082741 - AluJb SINE Alu -30 282 137 340 325 20 33 chr17 63422003 63422154 -26082399 - MIR3 SINE MIR -5 203 55 2243 89 52 0 chr17 63422622 63422913 -26081640 - AluSx SINE Alu -6 306 1 682 128 0 0 chr17 63422914 63423008 -26081545 - AluSg/x SINE Alu -19 293 200 865 286 138 19 chr17 63423686 63424139 -26080414 - L2 LINE L2 -19 3294 2777 1425 108 5 15 chr17 63424248 63424443 -26080110 + AluSg/x SINE Alu 82 274 -36 306 50 0 0 chr17 63424443 63424483 -26080070 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2456 84 0 0 chr17 63424798 63425095 -26079458 + AluSx SINE Alu 1 297 -15 2346 116 0 0 chr17 63425158 63425468 -26079085 - AluSg SINE Alu 0 310 1 531 0 0 0 chr17 63425712 63425771 -26078782 + (CA)n Simple_repeat Simple_repeat 2 60 0 2267 87 7 0 chr17 63425793 63426080 -26078473 - AluY SINE Alu -16 295 7 2381 93 3 3 chr17 63426085 63426386 -26078167 - AluSx SINE Alu -11 301 1 2209 100 31 0 chr17 63426582 63426873 -26077680 - AluSc SINE Alu -9 300 1 228 231 58 0 chr17 63426942 63426994 -26077559 - MIR SINE MIR -129 133 79 1927 160 0 17 chr17 63427953 63428115 -26076438 - AluSx SINE Alu -17 295 139 2470 82 0 3 chr17 63428115 63428419 -26076134 - AluSg SINE Alu -7 303 1 1927 160 0 17 chr17 63428419 63428556 -26075997 - AluSx SINE Alu -173 139 1 778 202 0 0 chr17 63428564 63428693 -26075860 - FLAM_C SINE Alu -4 129 1 346 234 26 0 chr17 63428719 63428796 -26075757 - MIR3 SINE MIR -7 201 123 233 108 6 6 chr17 63428896 63428946 -26075607 - Alu SINE Alu -267 35 1 2326 91 0 7 chr17 63428983 63429280 -26075273 - AluSg SINE Alu -15 295 1 1474 189 51 4 chr17 63430109 63430384 -26074169 + AluSx SINE Alu 6 293 -19 675 209 128 20 chr17 63430565 63430761 -26073792 - U3 snRNA snRNA 0 217 1 771 146 41 0 chr17 63431293 63431416 -26073137 - FLAM_C SINE Alu -5 128 1 591 275 93 13 chr17 63431946 63432182 -26072371 + L2 LINE L2 2804 3058 -214 958 108 36 14 chr17 63432472 63432611 -26071942 + AluSq/x SINE Alu 1 142 -170 2375 100 0 3 chr17 63432611 63432921 -26071632 + AluSc SINE Alu 1 309 0 2170 147 0 6 chr17 63433055 63433369 -26071184 + AluSx SINE Alu 1 312 0 198 260 115 96 chr17 63433429 63433533 -26071020 + L2 LINE L2 3111 3216 -56 512 269 71 0 chr17 63433599 63433781 -26070772 + LTR40a LTR ERVL 9 203 -316 2097 86 17 47 chr17 63433812 63434113 -26070440 - AluSx SINE Alu -16 296 5 443 218 203 0 chr17 63434524 63434657 -26069896 - MIR SINE MIR -27 235 76 2126 104 52 3 chr17 63434718 63435007 -26069546 + AluSx SINE Alu 1 303 -9 2158 128 23 3 chr17 63435018 63435324 -26069229 + AluSx SINE Alu 1 312 0 3173 178 20 19 chr17 63435328 63435924 -26068629 + MER21B LTR ERV1 12 608 -255 2439 92 0 3 chr17 63435930 63436234 -26068319 - AluSg SINE Alu -7 303 1 764 207 0 0 chr17 63436301 63436441 -26068112 + FLAM_C SINE Alu 2 141 -2 948 143 25 0 chr17 63436452 63436613 -26067940 + L1PB1 LINE L1 5703 5867 -284 2245 114 0 3 chr17 63436615 63436912 -26067641 - AluSp SINE Alu -17 296 1 2576 52 0 16 chr17 63436928 63437236 -26067317 - AluY SINE Alu -7 304 2 444 284 217 27 chr17 63437341 63437640 -26066913 + L2 LINE L2 2876 3231 -82 531 202 0 0 chr17 63438377 63438471 -26066082 + AluSg/x SINE Alu 197 290 -19 1324 191 16 4 chr17 63438472 63438723 -26065830 + AluSx SINE Alu 1 254 -58 1621 182 17 3 chr17 63438886 63439182 -26065371 + AluJb SINE Alu 1 300 -12 287 301 70 49 chr17 63439212 63439262 -26065291 + L2 LINE L2 3133 3180 -133 297 0 0 0 chr17 63439262 63439295 -26065258 + (CA)n Simple_repeat Simple_repeat 1 33 0 287 301 70 49 chr17 63439295 63439387 -26065166 + L2 LINE L2 3180 3278 -35 570 221 110 28 chr17 63439396 63439541 -26065012 + MIR SINE MIR 11 167 -95 2067 124 17 0 chr17 63439588 63439879 -26064674 - AluSx SINE Alu -16 296 1 1891 70 4 0 chr17 63440259 63440489 -26064064 - AluSp SINE Alu -82 231 1 1070 133 0 21 chr17 63440490 63440678 -26063875 - L1PB1 LINE L1 -45 6106 5923 398 162 14 0 chr17 63440781 63440855 -26063698 - L1ME LINE L1 -450 5671 5597 359 211 0 0 chr17 63440856 63440932 -26063621 - AluJ/FRAM SINE Alu -1 301 226 2439 87 0 0 chr17 63440935 63441234 -26063319 - AluSc SINE Alu -10 299 1 1350 200 4 26 chr17 63441234 63441504 -26063049 + AluJb SINE Alu 27 290 -22 1287 124 50 5 chr17 63441713 63441914 -26062639 - AluSg SINE Alu -100 210 1 765 212 7 0 chr17 63441984 63442121 -26062432 - FLAM_A SINE Alu -4 138 1 341 273 40 10 chr17 63442150 63442249 -26062304 - MIR SINE MIR -58 150 49 1924 131 47 0 chr17 63442321 63442595 -26061958 + AluSx SINE Alu 1 287 -25 246 357 62 8 chr17 63442812 63442941 -26061612 - MIR3 SINE MIR -1 207 72 3745 147 8 32 chr17 63443608 63444227 -26060326 - MER6A DNA MER2_type 0 605 2 1386 152 12 76 chr17 63445154 63445482 -26059071 + AluJb SINE Alu 1 307 -5 1835 169 3 13 chr17 63447240 63447374 -26057179 + AluJo SINE Alu 1 135 -177 1905 154 10 3 chr17 63447374 63447667 -26056886 + AluJb SINE Alu 1 295 -17 1835 169 3 13 chr17 63447667 63447834 -26056719 + AluJo SINE Alu 135 299 -13 2232 113 0 0 chr17 63447941 63448242 -26056311 + AluSx SINE Alu 1 301 -11 2198 117 3 0 chr17 63448248 63448538 -26056015 + AluSg SINE Alu 1 291 -19 236 329 0 0 chr17 63449541 63449611 -26054942 - MER20B DNA MER1_type -712 71 2 2329 113 0 0 chr17 63449659 63449961 -26054592 + AluSx SINE Alu 1 302 -10 1817 112 76 40 chr17 63449969 63450246 -26054307 + AluSg SINE Alu 1 287 -23 1929 106 44 56 chr17 63450405 63450745 -26053808 + MER1B DNA MER1_type 1 336 -1 414 292 70 47 chr17 63450909 63451210 -26053343 + L1MEd LINE L1 57 364 -5755 678 238 113 8 chr17 63451457 63451705 -26052848 + L1MEd LINE L1 911 1184 -4935 658 169 99 12 chr17 63451718 63451890 -26052663 - L1MA8 LINE L1 -24 6267 6081 2369 101 3 0 chr17 63451890 63452196 -26052357 - AluSx SINE Alu -5 307 1 221 339 100 5 chr17 63452556 63452827 -26051726 - L2 LINE L2 -251 3021 2719 2310 108 0 3 chr17 63452931 63453236 -26051317 - AluSx SINE Alu -7 305 2 2386 99 0 0 chr17 63453315 63453617 -26050936 - AluSx SINE Alu -9 303 2 430 309 129 0 chr17 63454006 63454207 -26050346 + MIR SINE MIR 31 257 -5 2592 131 45 7 chr17 63454348 63454767 -26049786 - MER31A LTR ERV1 -41 444 10 2407 78 0 26 chr17 63454777 63455085 -26049468 - AluSx SINE Alu -12 300 1 274 218 64 13 chr17 63455092 63455170 -26049383 + MIR SINE MIR 106 187 -75 841 185 25 6 chr17 63455990 63456152 -26048401 + U1 snRNA snRNA 1 165 0 266 189 63 74 chr17 63456207 63456302 -26048251 - AluY SINE Alu 0 301 208 1795 160 3 17 chr17 63456327 63456620 -26047933 - AluSx SINE Alu -19 293 5 2174 97 7 10 chr17 63456622 63456922 -26047631 - AluSx SINE Alu -13 299 1 1646 173 27 0 chr17 63457067 63457362 -26047191 - AluSx SINE Alu -7 305 3 30 0 0 0 chr17 63457488 63457518 -26047035 + AT_rich Low_complexity Low_complexity 1 30 0 660 128 79 123 chr17 63457814 63458017 -26046536 - ORSL DNA AcHobo -81 194 1 212 266 43 43 chr17 63458032 63458126 -26046427 + L2 LINE L2 3124 3217 -55 425 252 104 7 chr17 63458631 63458766 -26045787 - AluJb SINE Alu -28 284 137 1845 137 0 4 chr17 63458895 63459151 -26045402 + AluSx SINE Alu 1 255 -57 361 98 20 0 chr17 63459252 63459303 -26045250 - Alu SINE Alu -249 52 1 2059 124 0 26 chr17 63459593 63459900 -26044653 + AluSq SINE Alu 7 305 -8 1073 163 0 0 chr17 63459901 63460073 -26044480 + AluY SINE Alu 135 306 -5 1840 164 7 10 chr17 63460111 63460409 -26044144 + AluJb SINE Alu 1 297 -15 325 203 58 0 chr17 63460630 63460699 -26043854 - MER94 DNA DNA -33 101 29 32 16 0 33 chr17 63460829 63460860 -26043693 + AT_rich Low_complexity Low_complexity 1 31 -28 2280 111 5 49 chr17 63460860 63461028 -26043525 + L1PA14 LINE L1 5805 5979 -182 1971 116 11 4 chr17 63461028 63461296 -26043257 + AluSg SINE Alu 1 270 -40 2280 111 5 49 chr17 63461296 63461307 -26043246 + L1PA14 LINE L1 5979 5989 -172 234 0 0 0 chr17 63461307 63461333 -26043220 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2280 111 5 49 chr17 63461333 63461522 -26043031 + L1PA14 LINE L1 5989 6158 -3 32 16 0 33 chr17 63461522 63461537 -26043016 + AT_rich Low_complexity Low_complexity 31 45 -14 1737 156 3 10 chr17 63461537 63461825 -26042728 + AluSx SINE Alu 1 286 -26 32 16 0 33 chr17 63461825 63461838 -26042715 + AT_rich Low_complexity Low_complexity 45 59 0 2141 130 0 3 chr17 63462045 63462344 -26042209 + AluJo SINE Alu 1 298 -14 2268 105 3 3 chr17 63462647 63462953 -26041600 + AluSx SINE Alu 1 306 -6 2233 110 3 0 chr17 63463528 63463820 -26040733 + AluSg SINE Alu 1 293 -17 2126 111 10 3 chr17 63464228 63464517 -26040036 + AluSx SINE Alu 1 291 -21 324 235 114 30 chr17 63465257 63465389 -26039164 + L1ME4a LINE L1 5726 5868 -253 779 143 0 45 chr17 63465663 63465796 -26038757 + FLAM_C SINE Alu 6 132 -11 2530 60 3 3 chr17 63465985 63466285 -26038268 + AluSp SINE Alu 1 300 -13 2589 120 61 5 chr17 63466324 63466765 -26037788 + L1MB3 LINE L1 5710 6175 -8 2339 76 0 44 chr17 63467067 63467382 -26037171 + AluSg SINE Alu 1 301 -9 2216 127 3 0 chr17 63467673 63467981 -26036572 + AluSx SINE Alu 1 309 -3 2234 78 14 4 chr17 63468029 63468334 -26036219 + AluSp SINE Alu 1 308 0 2115 154 0 0 chr17 63468846 63469152 -26035401 + AluJb SINE Alu 1 306 -6 1046 235 4 21 chr17 63469286 63469529 -26035024 - AluJo SINE Alu -10 302 64 2154 122 3 0 chr17 63470068 63470364 -26034189 + AluSq SINE Alu 1 297 -16 2598 44 0 0 chr17 63470372 63470668 -26033885 + AluY SINE Alu 1 296 -15 313 139 0 0 chr17 63470710 63470753 -26033800 + 5S rRNA rRNA 1 43 -78 372 240 0 0 chr17 63470793 63470893 -26033660 + (TA)n Simple_repeat Simple_repeat 1 100 0 325 276 23 0 chr17 63470894 63470981 -26033572 - L1MC4 LINE L1 -1339 6703 6615 311 279 47 0 chr17 63470988 63471074 -26033479 - L1MC4 LINE L1 -1339 6703 6614 258 192 0 0 chr17 63471078 63471130 -26033423 + (TA)n Simple_repeat Simple_repeat 1 52 0 280 281 96 22 chr17 63471202 63471337 -26033216 + MIR SINE MIR 104 248 -14 29 28 0 0 chr17 63471348 63471384 -26033169 + AT_rich Low_complexity Low_complexity 1 36 0 2238 109 3 26 chr17 63471467 63471779 -26032774 - AluSc SINE Alu -4 305 1 528 183 193 123 chr17 63473789 63474089 -26030464 + L1ME3A LINE L1 5750 6070 -100 846 203 62 5 chr17 63474970 63475162 -26029391 - MER3 DNA MER1_type 0 209 7 2299 108 3 0 chr17 63475718 63476014 -26028539 - AluSp SINE Alu -16 297 1 1908 134 21 3 chr17 63476206 63476489 -26028064 - AluSx SINE Alu -24 288 1 270 296 37 25 chr17 63476534 63476615 -26027938 - L2 LINE L2 -45 3227 3146 1209 180 0 15 chr17 63476800 63477000 -26027553 + AluJb SINE Alu 108 304 -8 1740 162 13 26 chr17 63477184 63477486 -26027067 - AluJb SINE Alu -7 305 8 2495 64 3 0 chr17 63477500 63477795 -26026758 - AluY SINE Alu -15 296 1 2338 99 7 0 chr17 63477964 63478267 -26026286 - AluSg SINE Alu -5 305 1 779 171 0 8 chr17 63478287 63478416 -26026137 - FLAM_C SINE Alu -5 128 1 1526 153 54 44 chr17 63478564 63478859 -26025694 + AluJb SINE Alu 3 300 -12 307 243 69 104 chr17 63478860 63479033 -26025520 - L1ME4a LINE L1 -112 6009 5843 1933 123 6 57 chr17 63479818 63480134 -26024419 - AluSg SINE Alu -10 300 1 26 0 0 0 chr17 63480510 63480536 -26024017 + AT_rich Low_complexity Low_complexity 1 26 0 275 272 11 54 chr17 63480587 63480679 -26023874 + L2 LINE L2 3225 3312 -1 2146 92 56 0 chr17 63480957 63481241 -26023312 + AluSg SINE Alu 1 300 -10 908 89 0 0 chr17 63481466 63481578 -26022975 + AluSg SINE Alu 1 112 -198 278 114 45 0 chr17 63481579 63481623 -26022930 + Alu SINE Alu 245 290 -12 417 219 14 152 chr17 63481839 63482049 -26022504 - L2 LINE L2 -1 3312 3132 820 224 23 6 chr17 63482080 63482254 -26022299 + MER82 DNA MER2_type 366 542 -111 1494 224 9 26 chr17 63482262 63482611 -26021942 + MLT1A2 LTR MaLR 19 361 -13 2852 215 182 86 chr17 63482667 63482799 -26021754 + MLT1A2-int LTR MaLR 13 131 -1240 2331 84 0 10 chr17 63482799 63483097 -26021456 - AluSx SINE Alu -17 295 1 2852 215 182 86 chr17 63483097 63483876 -26020677 + MLT1A2-int LTR MaLR 131 1076 -295 2216 113 0 16 chr17 63483876 63484187 -26020366 - AluSg SINE Alu -4 306 1 2852 215 182 86 chr17 63484187 63484509 -26020044 + MLT1A2-int LTR MaLR 1076 1366 -5 680 192 103 19 chr17 63484538 63484694 -26019859 + MLT1A2 LTR MaLR 3 171 -219 1981 87 12 117 chr17 63484816 63485149 -26019404 - AluSq SINE Alu -15 298 1 861 152 0 0 chr17 63485259 63485391 -26019162 + FLAM_C SINE Alu 2 133 0 317 234 26 0 chr17 63486868 63486945 -26017608 - MER116 DNA Mariner 0 80 2 231 304 59 22 chr17 63487000 63487052 -26017501 - L2 LINE L2 0 3272 3223 2214 114 3 3 chr17 63487052 63487359 -26017194 - AluSp SINE Alu -6 307 1 231 304 59 22 chr17 63487359 63487441 -26017112 - L2 LINE L2 -49 3223 3133 335 288 54 9 chr17 63487523 63487634 -26016919 + L2 LINE L2 3155 3270 -2 220 308 55 0 chr17 63487693 63487784 -26016769 - MIR3 SINE MIR -8 200 105 567 208 30 83 chr17 63487841 63487962 -26016591 - MER97b DNA MER1_type? -874 179 68 2270 118 0 3 chr17 63487962 63488275 -26016278 - AluSx SINE Alu 0 312 1 567 208 30 83 chr17 63488275 63488321 -26016232 - MER97b DNA MER1_type? -985 68 21 844 177 55 6 chr17 63488477 63488641 -26015912 - AluJb SINE Alu -57 255 84 897 133 7 21 chr17 63488646 63488789 -26015764 - FLAM_C SINE Alu -2 141 1 1768 180 31 0 chr17 63488819 63489108 -26015445 + AluJo SINE Alu 1 298 -14 2369 90 0 10 chr17 63489188 63489489 -26015064 - AluSg SINE Alu -12 298 1 1069 250 44 47 chr17 63489516 63490045 -26014508 - MLT1H1 LTR MaLR -7 548 3 2024 131 7 7 chr17 63490743 63491041 -26013512 + AluSx SINE Alu 5 302 -10 2403 93 0 0 chr17 63491259 63491561 -26012992 + AluSc SINE Alu 1 302 -7 487 251 11 0 chr17 63492329 63492504 -26012049 + (TA)n Simple_repeat Simple_repeat 1 177 0 1589 98 0 0 chr17 63492553 63492758 -26011795 + AluSq SINE Alu 1 205 -108 2502 67 0 0 chr17 63492758 63493057 -26011496 + AluY SINE Alu 1 299 -12 666 149 0 18 chr17 63493057 63493171 -26011382 + AluSg/x SINE Alu 193 304 -5 28 48 0 0 chr17 63493207 63493249 -26011304 + AT_rich Low_complexity Low_complexity 1 42 0 2361 102 0 16 chr17 63493302 63493616 -26010937 - AluSq SINE Alu -4 309 1 2181 116 3 6 chr17 63493846 63494157 -26010396 - AluSp SINE Alu -3 310 1 516 169 0 0 chr17 63494539 63494622 -26009931 + AluJ/FLAM SINE Alu 2 84 -228 1154 132 54 10 chr17 63494722 63494926 -26009627 - MER31B LTR ERV1 -45 421 209 1406 122 4 55 chr17 63494933 63495170 -26009383 + AluSg/x SINE Alu 81 305 -5 568 206 171 21 chr17 63495170 63495352 -26009201 - MER31A LTR ERV1 -249 217 1 556 141 0 0 chr17 63495378 63495456 -26009097 + AluJ/FLAM SINE Alu 2 79 -233 234 0 0 0 chr17 63495472 63495498 -26009055 + (A)n Simple_repeat Simple_repeat 1 26 0 1119 160 34 55 chr17 63495519 63495756 -26008797 - AluJo SINE Alu -80 232 1 21 0 0 0 chr17 63495946 63495967 -26008586 + AT_rich Low_complexity Low_complexity 1 21 0 1017 58 44 0 chr17 63496410 63496547 -26008006 - L1PA5 LINE L1 -17 6137 5995 827 200 0 0 chr17 63496566 63496716 -26007837 - FRAM SINE Alu -26 150 1 2023 125 0 13 chr17 63496723 63497026 -26007527 - AluSx SINE Alu -13 299 1 1231 176 5 5 chr17 63497223 63497444 -26007109 + AluJb SINE Alu 86 306 -6 1727 152 23 19 chr17 63497570 63497880 -26006673 + AluJb SINE Alu 1 311 -1 2142 97 7 0 chr17 63498024 63498313 -26006240 + AluY SINE Alu 1 291 -20 27 29 0 0 chr17 63498313 63498347 -26006206 + AT_rich Low_complexity Low_complexity 1 34 0 877 176 114 71 chr17 63498429 63498607 -26005946 - MER34B LTR ERV1 0 565 396 1851 147 0 23 chr17 63498607 63498906 -26005647 + AluSx SINE Alu 1 292 -20 877 176 114 71 chr17 63498906 63499238 -26005315 - MER34B LTR ERV1 -169 396 11 1333 106 0 5 chr17 63499458 63499647 -26004906 + AluSg SINE Alu 1 188 -122 1116 127 0 12 chr17 63499648 63499813 -26004740 + AluY SINE Alu 57 219 -92 1241 102 0 0 chr17 63499914 63500080 -26004473 + AluSq SINE Alu 131 296 -17 2064 118 3 16 chr17 63500226 63500540 -26004013 - AluSg SINE Alu 0 310 1 180 0 0 0 chr17 63501337 63501357 -26003196 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 2228 73 0 3 chr17 63501360 63501646 -26002907 - AluY SINE Alu -26 285 1 2199 110 0 0 chr17 63501713 63502012 -26002541 - AluSx SINE Alu -13 299 1 1707 151 47 0 chr17 63502014 63502293 -26002260 - AluJb SINE Alu -20 292 1 1886 125 24 3 chr17 63503022 63503317 -26001236 + AluSx SINE Alu 1 301 -11 535 212 53 53 chr17 63503926 63504058 -26000495 + MIR SINE MIR 18 149 -113 353 319 88 11 chr17 63504632 63504814 -25999739 + MIR SINE MIR 57 252 -10 2245 84 0 0 chr17 63506111 63506410 -25998143 - AluSg SINE Alu -11 299 1 1594 152 46 7 chr17 63506641 63506924 -25997629 + AluJb SINE Alu 1 294 -18 1659 170 3 0 chr17 63507331 63507646 -25996907 + AluJb SINE Alu 1 316 0 1946 73 0 0 chr17 63507703 63507949 -25996604 + AluY SINE Alu 56 301 -10 1994 121 3 0 chr17 63508278 63508568 -25995985 + AluSc SINE Alu 1 291 -18 2160 84 11 0 chr17 63508570 63508857 -25995696 + AluY SINE Alu 1 290 -21 205 246 0 31 chr17 63508864 63508929 -25995624 + A-rich Low_complexity Low_complexity 6 68 0 473 297 162 5 chr17 63509066 63509251 -25995302 + MIR SINE MIR 23 236 -26 1871 154 3 0 chr17 63509377 63509682 -25994871 + AluSq SINE Alu 1 306 -7 275 207 305 0 chr17 63509817 63509899 -25994654 - L2 LINE L2 -15 3298 3192 1005 118 21 0 chr17 63510164 63510308 -25994245 + AluSx SINE Alu 1 147 -166 2166 165 64 13 chr17 63510366 63510759 -25993794 - LTR3 LTR ERVK -15 417 5 1039 155 0 0 chr17 63510761 63510935 -25993618 + AluSx SINE Alu 137 310 0 194 262 0 0 chr17 63511093 63511135 -25993418 + L2 LINE L2 3261 3302 -11 212 286 92 0 chr17 63511142 63511240 -25993313 + L2 LINE L2 1992 2098 -1216 486 252 136 37 chr17 63511259 63511501 -25993052 + L2 LINE L2 2228 2493 -821 1045 152 69 28 chr17 63511501 63511718 -25992835 - AluJo SINE Alu -76 236 11 297 331 76 49 chr17 63511733 63511780 -25992773 + L2 LINE L2 2692 2736 -578 2180 104 0 10 chr17 63511780 63512087 -25992466 - AluSx SINE Alu -8 304 1 297 331 76 49 chr17 63512087 63512302 -25992251 + L2 LINE L2 2736 2961 -353 1924 100 0 7 chr17 63512343 63512613 -25991940 - AluSx SINE Alu -12 300 33 24 0 0 0 chr17 63512764 63512788 -25991765 + AT_rich Low_complexity Low_complexity 1 24 0 1286 169 59 4 chr17 63512827 63513064 -25991489 - AluSx SINE Alu -22 290 41 919 104 42 0 chr17 63513115 63513310 -25991243 - AluSg/x SINE Alu 0 331 131 2073 110 0 13 chr17 63513320 63513620 -25990933 - AluSq SINE Alu -16 297 2 1956 108 0 0 chr17 63513744 63514012 -25990541 - AluSc SINE Alu -41 268 1 2224 95 0 0 chr17 63514021 63514316 -25990237 - AluSx SINE Alu -17 295 1 2057 118 0 23 chr17 63514402 63514706 -25989847 - AluSx SINE Alu -15 297 1 701 114 0 0 chr17 63514714 63514819 -25989734 - AluSg/x SINE Alu 0 312 208 259 179 0 0 chr17 63514819 63514858 -25989695 - Alu SINE Alu -263 40 2 430 105 0 0 chr17 63515123 63515180 -25989373 + Alu SINE Alu 1 57 -256 1650 170 3 20 chr17 63515243 63515543 -25989010 + AluSx SINE Alu 5 299 -13 1375 154 53 8 chr17 63515551 63515798 -25988755 + AluJb SINE Alu 1 258 -54 1914 137 23 3 chr17 63515928 63516234 -25988319 - AluSx SINE Alu 0 312 1 180 176 0 0 chr17 63516296 63516330 -25988223 + (TA)n Simple_repeat Simple_repeat 2 35 0 1802 106 79 7 chr17 63516510 63516802 -25987751 - AluSq SINE Alu 0 313 1 1930 130 19 13 chr17 63517035 63517342 -25987211 - AluSx SINE Alu -3 309 1 498 194 144 58 chr17 63517590 63517729 -25986824 + FRAM SINE Alu 14 164 -12 893 182 6 12 chr17 63518111 63518276 -25986277 + U1 snRNA snRNA 1 164 -1 299 209 131 117 chr17 63518529 63518630 -25985923 - MLT1D LTR MaLR -212 293 195 2160 100 0 0 chr17 63518630 63518930 -25985623 - AluSq SINE Alu -13 300 1 299 209 131 117 chr17 63518930 63518946 -25985607 - MLT1D LTR MaLR -310 195 181 333 0 0 0 chr17 63518946 63518983 -25985570 + (TTA)n Simple_repeat Simple_repeat 3 39 0 4667 58 2 0 chr17 63518983 63519550 -25985003 - L1PA6 LINE L1 -18 6136 5569 299 209 131 117 chr17 63519550 63519636 -25984917 - MLT1D LTR MaLR -323 182 85 2157 98 0 0 chr17 63519637 63519932 -25984621 - AluSg SINE Alu -15 295 1 1091 144 0 0 chr17 63520068 63520228 -25984325 + U1 snRNA snRNA 5 164 -1 1415 146 33 57 chr17 63520504 63520660 -25983893 - AluJo SINE Alu -18 294 147 1957 96 48 7 chr17 63520660 63520953 -25983600 - AluSq SINE Alu -8 305 1 1415 146 33 57 chr17 63520953 63521097 -25983456 - AluJo SINE Alu -165 147 1 1788 115 10 51 chr17 63521212 63521398 -25983155 - AluSq SINE Alu 0 312 142 2095 126 0 0 chr17 63521398 63521708 -25982845 - AluSq SINE Alu -3 310 1 1788 115 10 51 chr17 63521708 63521845 -25982708 - AluSq SINE Alu -170 142 1 256 279 6 21 chr17 63521897 63521998 -25982555 + AluJ/FLAM SINE Alu 3 60 -242 183 329 14 27 chr17 63522048 63522121 -25982432 - L2 LINE L2 -1 3312 3241 689 171 0 0 chr17 63522520 63522643 -25981910 - L1M4 LINE L1 -700 5484 5362 1809 153 7 3 chr17 63522644 63522939 -25981614 - AluSx SINE Alu -16 296 1 376 200 0 0 chr17 63523032 63523102 -25981451 - L1M4 LINE L1 -1028 5118 5049 1954 144 0 0 chr17 63523102 63523414 -25981139 - AluSx SINE Alu 0 312 1 355 261 98 39 chr17 63523481 63523509 -25981044 - MER20B DNA MER1_type -2 781 756 2204 100 0 7 chr17 63523509 63523810 -25980743 - AluSx SINE Alu -13 299 1 355 261 98 39 chr17 63523810 63523934 -25980619 - MER20B DNA MER1_type -27 756 620 1421 167 16 49 chr17 63523934 63524239 -25980314 + AluJb SINE Alu 1 295 -17 403 248 115 19 chr17 63524543 63524700 -25979853 - MIR SINE MIR -56 206 35 2161 88 17 3 chr17 63526036 63526331 -25978222 - AluSq SINE Alu -14 299 1 1936 85 0 0 chr17 63526457 63526703 -25977850 + AluSq SINE Alu 1 246 -67 536 213 19 45 chr17 63527157 63527312 -25977241 + U1 snRNA snRNA 10 160 -5 731 234 64 11 chr17 63527477 63527665 -25976888 + AluJb SINE Alu 110 307 -5 2072 97 10 3 chr17 63527784 63528074 -25976479 + AluSx SINE Alu 11 302 -10 1117 111 0 29 chr17 63528104 63528157 -25976396 + AluSg/x SINE Alu 146 199 -113 5635 64 10 0 chr17 63528157 63528841 -25975712 - LTR8 LTR ERV1 0 691 1 1117 111 0 29 chr17 63528841 63528959 -25975594 + AluSg/x SINE Alu 199 312 0 332 268 71 31 chr17 63529054 63529181 -25975372 - HUERS-P1 LTR ERV1 -5531 732 601 1141 157 114 104 chr17 63529192 63529491 -25975062 + AluJo SINE Alu 1 302 0 1907 138 0 40 chr17 63529502 63529682 -25974871 - AluSx SINE Alu 0 312 126 2144 110 7 0 chr17 63529682 63529983 -25974570 - AluSg SINE Alu -7 303 1 2117 122 0 3 chr17 63529983 63530295 -25974258 - AluSx SINE Alu -1 311 1 1907 138 0 40 chr17 63530295 63530438 -25974115 - AluSx SINE Alu -184 128 1 608 156 48 96 chr17 63530755 63530837 -25973716 - PABL_B LTR ERV1 0 667 595 1679 120 79 28 chr17 63530837 63530976 -25973577 + AluSx SINE Alu 1 131 -181 2053 103 10 17 chr17 63530976 63531277 -25973276 + AluSc SINE Alu 2 300 -9 1679 120 79 28 chr17 63531277 63531428 -25973125 + AluSx SINE Alu 131 306 -6 608 156 48 96 chr17 63531428 63531506 -25973047 - PABL_B LTR ERV1 -72 595 515 327 115 0 39 chr17 63531506 63531558 -25972995 + Alu SINE Alu 1 50 -250 377 195 73 0 chr17 63531568 63531650 -25972903 - PABL_B LTR ERV1 0 667 580 2042 130 3 0 chr17 63531650 63531951 -25972602 + AluSq SINE Alu 1 302 -11 353 252 48 48 chr17 63531969 63532116 -25972437 - PABL_A LTR ERV1 -153 507 361 329 259 27 103 chr17 63532142 63532258 -25972295 - PABL_B LTR ERV1 -460 207 115 2335 67 10 0 chr17 63532258 63532557 -25971996 - AluY SINE Alu -9 302 1 329 259 27 103 chr17 63532557 63532664 -25971889 - PABL_B LTR ERV1 -552 115 1 649 164 19 0 chr17 63532737 63532841 -25971712 - LTR26B LTR ERV1 -29 502 397 940 197 10 31 chr17 63532845 63533038 -25971515 - MSTD LTR MaLR -207 189 1 669 226 111 71 chr17 63533133 63533225 -25971328 - MIR SINE MIR 0 262 175 2156 92 0 3 chr17 63533225 63533517 -25971036 + AluSc SINE Alu 6 296 -13 669 226 111 71 chr17 63533517 63533676 -25970877 - MIR SINE MIR -87 175 1 2637 106 3 13 chr17 63533823 63534202 -25970351 - THE1C LTR MaLR 0 375 1 210 37 0 0 chr17 63534769 63534796 -25969757 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1652 141 14 40 chr17 63535160 63535457 -25969096 - AluJb SINE Alu -10 302 14 810 151 9 155 chr17 63535684 63535903 -25968650 + AluJo SINE Alu 6 192 -120 2220 94 19 0 chr17 63536104 63536411 -25968142 + AluSq SINE Alu 1 313 0 2082 87 0 0 chr17 63536416 63536691 -25967862 + AluSx SINE Alu 1 275 -37 194 0 39 0 chr17 63536703 63536729 -25967824 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2371 86 0 0 chr17 63537076 63537377 -25967176 + AluSq SINE Alu 1 301 -12 2369 47 40 0 chr17 63537379 63537678 -25966875 + AluYa5 SINE Alu 1 311 0 2026 113 0 13 chr17 63538456 63538756 -25965797 + AluSx SINE Alu 1 296 -16 212 408 0 0 chr17 63538958 63539034 -25965519 - L2 LINE L2 -250 3063 2988 714 164 55 16 chr17 63539035 63539163 -25965390 + FLAM_A SINE Alu 1 133 0 649 251 42 60 chr17 63539344 63539537 -25965016 - L1MEc LINE L1 -4156 2240 2045 1118 168 82 105 chr17 63539537 63539889 -25964664 - MER2 DNA MER2_type 0 344 1 649 251 42 60 chr17 63539889 63540009 -25964544 - L1MEc LINE L1 -4351 2045 1933 2360 55 3 0 chr17 63540009 63540301 -25964252 + AluY SINE Alu 1 293 -18 649 251 42 60 chr17 63540301 63540368 -25964185 - L1MEc LINE L1 -4463 1933 1866 2191 107 0 16 chr17 63540378 63540695 -25963858 + AluSx SINE Alu 1 312 0 2210 64 19 29 chr17 63540715 63541027 -25963526 + AluSq SINE Alu 1 309 -4 2002 123 3 26 chr17 63541027 63541335 -25963218 + AluSx SINE Alu 1 302 -10 2145 94 0 0 chr17 63541738 63542024 -25962529 + AluSg SINE Alu 1 286 -24 465 207 36 7 chr17 63542027 63542042 -25962511 - L1ME3A LINE L1 -112 6052 6039 766 204 0 0 chr17 63542042 63542174 -25962379 + FLAM_C SINE Alu 2 133 0 465 207 36 7 chr17 63542174 63542274 -25962279 - L1ME3A LINE L1 -125 6039 5942 296 311 11 11 chr17 63542740 63542830 -25961723 - MIR3 SINE MIR -8 200 111 204 281 53 0 chr17 63543029 63543086 -25961467 - MIR SINE MIR -106 102 43 405 270 18 74 chr17 63543864 63544027 -25960526 + MIR3 SINE MIR 20 173 -35 29 0 0 0 chr17 63544848 63544877 -25959676 + AT_rich Low_complexity Low_complexity 1 29 0 303 271 80 23 chr17 63545169 63545300 -25959253 + MIR SINE MIR 61 204 -58 3352 147 36 7 chr17 63545300 63545822 -25958731 + L1MD1 LINE L1 5634 6176 -66 2013 102 6 87 chr17 63545822 63546144 -25958409 - AluSq SINE Alu -17 296 1 3352 147 36 7 chr17 63546144 63546205 -25958348 + L1MD1 LINE L1 6176 6234 -8 303 271 80 23 chr17 63546205 63546250 -25958303 + MIR SINE MIR 204 245 -17 195 204 0 23 chr17 63546246 63546290 -25958263 + MIR SINE MIR 97 139 -69 * 493 285 103 6 chr17 63546296 63546461 -25958092 - MIR SINE MIR -5 257 77 1142 275 46 26 chr17 63546461 63546850 -25957703 - MLT1I LTR MaLR -4 405 9 191 380 20 0 chr17 63546887 63546932 -25957621 + MIR SINE MIR 152 195 -67 2495 87 0 3 chr17 63546932 63547241 -25957312 + AluSp SINE Alu 1 308 -5 191 380 20 0 chr17 63547241 63547295 -25957258 + MIR SINE MIR 195 253 -9 247 266 266 24 chr17 63547519 63547643 -25956910 - MIR3 SINE MIR -5 203 50 2394 85 7 7 chr17 63547646 63547951 -25956602 - AluSc SINE Alu -3 306 2 201 121 0 0 chr17 63548358 63548391 -25956162 + (TAA)n Simple_repeat Simple_repeat 1 33 0 2229 104 0 24 chr17 63548530 63548827 -25955726 + AluSq SINE Alu 2 291 -22 2583 59 0 7 chr17 63549695 63549999 -25954554 - AluY SINE Alu -9 302 1 279 0 0 0 chr17 63550063 63550094 -25954459 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 249 242 32 0 chr17 63550713 63550775 -25953778 + CT-rich Low_complexity Low_complexity 1 64 0 2203 135 0 6 chr17 63550810 63551122 -25953431 + AluJb SINE Alu 1 310 -2 527 244 161 57 chr17 63551222 63551417 -25953136 - L2 LINE L2 -5 3267 3043 2374 115 0 16 chr17 63551417 63551731 -25952822 + AluSx SINE Alu 1 309 -3 527 244 161 57 chr17 63551731 63551765 -25952788 - L2 LINE L2 -229 3043 3014 237 152 0 61 chr17 63552073 63552139 -25952414 - L1ME4a LINE L1 -9 6112 6051 432 261 161 31 chr17 63552169 63552518 -25952035 - L1ME4a LINE L1 -149 5972 5579 21 36 0 0 chr17 63554892 63554920 -25949633 + AT_rich Low_complexity Low_complexity 1 28 0 2205 131 3 3 chr17 63555150 63555463 -25949090 - AluSq SINE Alu 0 313 1 2472 103 0 0 chr17 63555519 63555831 -25948722 - AluSx SINE Alu 0 312 1 806 211 56 86 chr17 63555934 63556166 -25948387 + MIR SINE MIR 5 229 -33 1116 179 27 0 chr17 63556274 63556458 -25948095 - MER5A DNA MER1_type 0 189 1 294 266 73 18 chr17 63556706 63556815 -25947738 + MIR SINE MIR 58 172 -90 4752 123 37 41 chr17 63557661 63558508 -25946045 - L1MB2 LINE L1 -4 6167 5325 300 27 0 0 chr17 63558511 63558548 -25946005 + (TG)n Simple_repeat Simple_repeat 2 38 0 310 275 0 25 chr17 63558556 63558636 -25945917 - L1MC4 LINE L1 -1339 6703 6626 396 0 0 0 chr17 63558645 63558689 -25945864 + (TC)n Simple_repeat Simple_repeat 2 45 0 342 0 0 0 chr17 63558688 63558726 -25945827 + (TA)n Simple_repeat Simple_repeat 1 38 0 * 704 175 35 0 chr17 63558728 63558842 -25945711 - FLAM_A SINE Alu -15 118 1 474 200 0 45 chr17 63559151 63559261 -25945292 - MER96B DNA MER1_type? 0 417 313 1820 149 4 7 chr17 63559261 63559537 -25945016 - AluJb SINE Alu -16 296 22 2260 102 7 20 chr17 63559537 63559840 -25944713 + AluSx SINE Alu 1 299 -13 2202 132 3 0 chr17 63560233 63560544 -25944009 - AluSx SINE Alu 0 312 1 1644 268 99 77 chr17 63561000 63562006 -25942547 + L3 LINE CR1 548 1576 -1 294 312 56 48 chr17 63562140 63562265 -25942288 - L2 LINE L2 -9 3263 3138 764 239 105 13 chr17 63562439 63562677 -25941876 + MIR SINE MIR 2 261 -1 207 0 0 0 chr17 63562683 63562706 -25941847 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2297 96 7 0 chr17 63563167 63563460 -25941093 - AluSq SINE Alu -18 295 1 739 292 125 27 chr17 63563757 63564196 -25940357 + LTR33 LTR ERVL 35 516 -5 2475 74 3 0 chr17 63564777 63565075 -25939478 + AluSq SINE Alu 1 299 -14 22 35 0 0 chr17 63565637 63565666 -25938887 + AT_rich Low_complexity Low_complexity 1 29 0 1891 169 3 3 chr17 63565902 63566198 -25938355 + AluJo SINE Alu 1 296 -16 2315 81 30 0 chr17 63566350 63566645 -25937908 - AluY SINE Alu -7 304 1 2168 111 3 48 chr17 63566708 63567023 -25937530 - AluSx SINE Alu -11 301 1 1795 161 7 14 chr17 63567331 63567485 -25937068 - AluJo SINE Alu -22 290 137 2289 119 0 0 chr17 63567485 63567788 -25936765 - AluSq SINE Alu -8 305 3 1795 161 7 14 chr17 63567788 63567925 -25936628 - AluJo SINE Alu -175 137 1 2395 107 0 0 chr17 63568312 63568620 -25935933 - AluSx SINE Alu -4 308 1 319 286 84 49 chr17 63568620 63568698 -25935855 + L2 LINE L2 1270 1344 -1970 2513 75 0 10 chr17 63568698 63569006 -25935547 - AluY SINE Alu -6 305 1 319 286 84 49 chr17 63569006 63569130 -25935423 + L2 LINE L2 1344 1479 -1835 697 176 16 8 chr17 63569362 63569487 -25935066 - AluJb SINE Alu -186 126 1 775 298 227 37 chr17 63569497 63569733 -25934820 + L2 LINE L2 1656 1846 -1468 2004 155 0 7 chr17 63569733 63570030 -25934523 + AluSx SINE Alu 2 296 -16 775 298 227 37 chr17 63570030 63570498 -25934055 + L2 LINE L2 1846 2494 -820 1976 179 0 0 chr17 63570512 63570813 -25933740 + AluJo SINE Alu 1 301 -11 277 220 0 0 chr17 63570819 63570869 -25933684 + AluYb8 SINE Alu 132 181 -127 334 293 50 10 chr17 63570893 63570992 -25933561 + L2 LINE L2 2550 2652 -662 839 258 180 31 chr17 63570999 63571530 -25933023 - L2 LINE L2 -7 3306 2702 2277 114 0 0 chr17 63571873 63572172 -25932381 - AluY SINE Alu -12 299 1 494 270 9 9 chr17 63572252 63572367 -25932186 + L2 LINE L2 3154 3268 -4 301 252 76 76 chr17 63572336 63572467 -25932086 - MIR SINE MIR -49 213 83 * 1188 181 168 10 chr17 63572646 63572955 -25931598 + MSTC LTR MaLR 1 358 -70 2416 114 0 0 chr17 63572958 63573266 -25931287 - AluSx SINE Alu -4 308 1 295 185 31 0 chr17 63573393 63573458 -25931095 + MSTC LTR MaLR 361 427 -1 2171 131 3 3 chr17 63573680 63573978 -25930575 + AluSx SINE Alu 1 298 -14 292 292 69 0 chr17 63574224 63574354 -25930199 + L1ME4a LINE L1 4681 4819 -1327 1420 154 0 14 chr17 63574358 63574572 -25929981 + AluJo SINE Alu 85 295 -17 869 273 80 17 chr17 63574625 63575068 -25929485 + L1ME4a LINE L1 5159 5634 -813 655 218 157 0 chr17 63575082 63575229 -25929324 - MER5A DNA MER1_type -10 179 10 773 234 58 0 chr17 63575254 63575408 -25929145 - MER5B DNA MER1_type -12 166 4 282 231 10 39 chr17 63575409 63575513 -25929040 + L1ME4a LINE L1 5647 5747 -374 709 168 84 8 chr17 63575519 63575650 -25928903 + FAM SINE Alu 33 173 -12 446 281 150 49 chr17 63575650 63575956 -25928597 + L1ME4a LINE L1 5741 6077 -44 819 156 7 15 chr17 63575958 63576093 -25928460 - AluJb SINE Alu -178 134 1 2153 116 0 44 chr17 63576144 63576464 -25928089 + AluSq SINE Alu 1 306 -7 217 286 18 0 chr17 63576729 63576785 -25927768 - MIR SINE MIR -68 140 84 2538 87 0 0 chr17 63576836 63577148 -25927405 - AluSx SINE Alu 0 312 1 2266 117 0 16 chr17 63577156 63577472 -25927081 - AluSq SINE Alu -1 312 2 940 249 76 4 chr17 63581283 63581520 -25923033 + MIR SINE MIR 9 262 0 775 244 108 6 chr17 63581781 63581957 -25922596 + MER91A DNA MER1_type 1 194 -2 279 173 0 0 chr17 63582557 63582609 -25921944 + CT-rich Low_complexity Low_complexity 1 52 0 287 254 130 80 chr17 63582609 63582747 -25921806 - L2 LINE L2 -5 3267 3123 909 163 54 7 chr17 63584253 63584400 -25920153 - FRAM SINE Alu -12 154 1 2528 77 0 0 chr17 63584499 63584798 -25919755 - AluSg SINE Alu -11 299 1 684 189 0 0 chr17 63584970 63585081 -25919472 - MER81 DNA DNA 0 114 4 315 194 90 0 chr17 63586094 63586161 -25918392 - MIR SINE MIR -79 183 111 223 265 0 0 chr17 63586581 63586630 -25917923 - L2 LINE L2 -70 3202 3154 416 333 105 18 chr17 63586745 63586964 -25917589 + L3 LINE CR1 1332 1569 -8 360 242 176 33 chr17 63587901 63588054 -25916499 - MIR3 SINE MIR -12 196 22 670 190 9 0 chr17 63588924 63589040 -25915513 - MIR3 SINE MIR -14 194 78 25 65 0 0 chr17 63590213 63590259 -25914294 + GC_rich Low_complexity Low_complexity 1 46 0 489 180 22 0 chr17 63593724 63593813 -25910740 + MER94 DNA DNA 9 99 -35 221 268 28 14 chr17 63595259 63595330 -25909223 + CT-rich Low_complexity Low_complexity 1 72 0 453 19 0 0 chr17 63595734 63595788 -25908765 + (TG)n Simple_repeat Simple_repeat 2 55 0 501 218 32 48 chr17 63597376 63597500 -25907053 + MIR3 SINE MIR 85 206 -2 1646 169 11 4 chr17 63597522 63597789 -25906764 + AluJb SINE Alu 43 311 -1 636 132 19 0 chr17 63598559 63598665 -25905888 - MER45A DNA AcHobo 0 178 71 227 306 63 72 chr17 63598674 63598785 -25905768 - L2 LINE L2 -25 3247 3138 1778 163 20 13 chr17 63598958 63599258 -25905295 - AluJo SINE Alu -10 302 1 224 278 17 96 chr17 63599260 63599375 -25905178 + MIR SINE MIR 93 198 -64 2155 121 23 7 chr17 63599664 63599970 -25904583 - AluSx SINE Alu -1 311 1 1750 53 18 13 chr17 63602486 63602711 -25901842 + AluY SINE Alu 86 311 0 2034 77 70 0 chr17 63602766 63603039 -25901514 - AluY SINE Alu -19 292 1 288 248 158 20 chr17 63603313 63603414 -25901139 - L2 LINE L2 -1 3312 3198 319 312 195 10 chr17 63606684 63606889 -25897664 + MIR SINE MIR 20 262 0 2336 96 3 0 chr17 63610062 63610363 -25894190 + AluSx SINE Alu 1 302 -10 674 278 44 40 chr17 63610490 63610738 -25893815 + MIR SINE MIR 8 256 -6 391 216 90 67 chr17 63611091 63611225 -25893328 + MIR SINE MIR 126 262 0 713 267 47 22 chr17 63611226 63611458 -25893095 - L2 LINE L2 0 3313 3076 1051 143 0 7 chr17 63611471 63611625 -25892928 + AluJo SINE Alu 1 153 -159 1667 160 0 4 chr17 63611625 63611869 -25892684 + AluJb SINE Alu 52 294 -18 1988 245 50 20 chr17 63611869 63612458 -25892095 - L2 LINE L2 -255 3058 2447 1904 158 0 23 chr17 63612628 63612932 -25891621 + AluJo SINE Alu 1 297 -15 192 339 91 8 chr17 63612969 63613090 -25891463 - L2 LINE L2 -189 3083 2953 324 0 0 0 chr17 63614393 63614429 -25890124 + (TG)n Simple_repeat Simple_repeat 2 37 0 781 227 89 30 chr17 63614464 63614667 -25889886 + MER58C DNA MER1_type 1 215 0 408 283 130 23 chr17 63615682 63615859 -25888694 + MIR SINE MIR 9 204 -58 1834 156 7 23 chr17 63615859 63616161 -25888392 + AluSx SINE Alu 1 297 -15 2297 115 3 0 chr17 63616417 63616722 -25887831 - AluSx SINE Alu -6 306 1 2309 102 0 7 chr17 63618677 63618982 -25885571 - AluSx SINE Alu -9 303 1 264 240 115 107 chr17 63619438 63619821 -25884732 - L1ME4a LINE L1 -12 6109 5724 2364 97 3 3 chr17 63619890 63620190 -25884363 + AluSx SINE Alu 1 300 -12 279 180 82 0 chr17 63620192 63620253 -25884300 - L1MB2 LINE L1 -14 6157 6092 2252 117 10 0 chr17 63620262 63620570 -25883983 - AluSx SINE Alu -1 311 1 300 154 0 0 chr17 63620642 63620694 -25883859 + (TA)n Simple_repeat Simple_repeat 2 53 0 234 267 0 12 chr17 63620697 63620783 -25883770 + L1MC4 LINE L1 6619 6703 -1339 1335 181 118 22 chr17 63620849 63621119 -25883434 - AluJo SINE Alu -16 296 1 214 303 56 28 chr17 63621418 63621560 -25882993 - L2 LINE L2 0 3313 3168 2308 71 3 3 chr17 63621573 63621855 -25882698 - AluSc SINE Alu -3 306 25 2105 143 0 0 chr17 63621921 63622214 -25882339 + AluJb SINE Alu 1 293 -19 2420 53 7 30 chr17 63622418 63622720 -25881833 + AluY SINE Alu 1 295 -16 1911 117 30 11 chr17 63622815 63623081 -25881472 - AluSx SINE Alu -39 273 3 23 0 0 0 chr17 63623092 63623115 -25881438 + AT_rich Low_complexity Low_complexity 1 23 0 446 198 19 0 chr17 63623754 63623860 -25880693 + CT-rich Low_complexity Low_complexity 4 111 0 270 214 38 36 chr17 63624009 63624089 -25880464 + L1MC5 LINE L1 7842 7920 -122 2047 141 0 32 chr17 63624089 63624401 -25880152 - AluSx SINE Alu -9 303 2 270 214 38 36 chr17 63624401 63624452 -25880101 + L1MC5 LINE L1 7920 8042 0 392 297 0 16 chr17 63624457 63624585 -25879968 - MER5A DNA MER1_type -28 161 36 372 254 217 0 chr17 63624641 63624779 -25879774 - L2 LINE L2 -2 3311 3144 567 323 86 5 chr17 63624783 63624981 -25879572 - MIR SINE MIR -38 224 11 435 303 157 6 chr17 63625449 63625627 -25878926 - MIR SINE MIR -57 205 1 242 325 61 25 chr17 63625632 63625795 -25878758 - L2 LINE L2 -1018 2296 2128 243 300 88 0 chr17 63627473 63627553 -25877000 - L2 LINE L2 -5 3308 3222 326 300 0 0 chr17 63627621 63627701 -25876852 - L2 LINE L2 -212 3060 2981 230 324 104 64 chr17 63627843 63628006 -25876547 - L2 LINE L2 -459 2855 2677 2536 52 0 23 chr17 63628006 63628315 -25876238 - AluY SINE Alu -9 302 1 230 324 104 64 chr17 63628315 63628401 -25876152 - L2 LINE L2 -637 2677 2596 1284 157 17 64 chr17 63628574 63628694 -25875859 - MER58A DNA MER1_type -2196 224 119 1966 161 0 3 chr17 63628694 63628993 -25875560 + AluJb SINE Alu 1 298 -14 1284 157 17 64 chr17 63628993 63629107 -25875446 - MER58A DNA MER1_type -2301 119 1 745 262 167 0 chr17 63629141 63629362 -25875191 + MIR SINE MIR 4 261 -1 2239 115 3 0 chr17 63629879 63630184 -25874369 + AluSc SINE Alu 1 306 -3 779 177 0 0 chr17 63630329 63630459 -25874094 - FLAM_C SINE Alu -3 130 1 212 57 0 29 chr17 63631907 63631942 -25872611 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 2085 127 10 0 chr17 63632922 63633213 -25871340 - AluSx SINE Alu -18 294 1 23 33 0 0 chr17 63634043 63634073 -25870480 + GC_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr17 63634227 63634275 -25870278 + GC_rich Low_complexity Low_complexity 1 48 0 29 0 0 0 chr17 63634585 63634614 -25869939 + GC_rich Low_complexity Low_complexity 1 29 0 2465 100 0 0 chr17 63635142 63635452 -25869101 + AluSg SINE Alu 1 310 0 2418 89 0 3 chr17 63635953 63636266 -25868287 - AluSq SINE Alu -1 312 1 2075 129 0 7 chr17 63636268 63636563 -25867990 - AluSx SINE Alu -19 293 1 2151 102 3 13 chr17 63636583 63636886 -25867667 - AluJb SINE Alu -12 300 1 2591 65 0 3 chr17 63637095 63637402 -25867151 + AluSc SINE Alu 1 306 -3 1098 205 19 0 chr17 63639381 63639586 -25864967 - AluJb SINE Alu -3 309 101 711 168 38 15 chr17 63639586 63639611 -25864942 - FLAM_C SINE Alu -172 140 117 2250 126 0 3 chr17 63639611 63639921 -25864632 - AluSx SINE Alu -3 309 1 711 168 38 15 chr17 63639921 63640026 -25864527 - FLAM_C SINE Alu -195 117 7 207 0 0 0 chr17 63640216 63640239 -25864314 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 645 133 0 0 chr17 63640243 63640326 -25864227 - FRAM SINE Alu -30 146 64 2075 152 0 0 chr17 63640332 63640629 -25863924 - AluJb SINE Alu -14 298 2 360 191 107 36 chr17 63641026 63641110 -25863443 + MER5A DNA MER1_type 100 189 0 1660 182 14 0 chr17 63641264 63641539 -25863014 + AluJo SINE Alu 1 279 -33 387 0 0 0 chr17 63641542 63641585 -25862968 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 2092 137 7 0 chr17 63642745 63643044 -25861509 + AluSx SINE Alu 1 301 -11 27 29 0 0 chr17 63643091 63643125 -25861428 + AT_rich Low_complexity Low_complexity 1 34 0 2467 93 0 3 chr17 63643455 63643768 -25860785 - AluSq SINE Alu -1 312 1 2201 91 3 64 chr17 63643842 63644022 -25860531 - AluSg SINE Alu 0 310 157 204 40 0 0 chr17 63644022 63644047 -25860506 + (TG)n Simple_repeat Simple_repeat 2 26 0 2201 91 3 64 chr17 63644047 63644196 -25860357 - AluSg SINE Alu -153 157 1 37 23 0 0 chr17 63644503 63644547 -25860006 + AT_rich Low_complexity Low_complexity 1 44 0 2598 47 0 3 chr17 63644588 63644885 -25859668 + AluY SINE Alu 1 296 -15 2339 102 0 7 chr17 63644928 63645231 -25859322 + AluSg SINE Alu 1 301 -9 239 248 0 15 chr17 63646080 63646213 -25858340 + GA-rich Low_complexity Low_complexity 1 131 0 23 0 0 0 chr17 63647341 63647364 -25857189 + AT_rich Low_complexity Low_complexity 1 23 0 812 182 23 0 chr17 63647457 63647589 -25856964 + AluJo SINE Alu 124 258 -54 21 0 0 0 chr17 63647751 63647772 -25856781 + AT_rich Low_complexity Low_complexity 1 21 0 1478 119 88 0 chr17 63648251 63648478 -25856075 + AluJb SINE Alu 48 294 -18 714 256 177 0 chr17 63649070 63649285 -25855268 - MIR SINE MIR -2 260 8 325 229 15 84 chr17 63649515 63649646 -25854907 + L2 LINE L2 3150 3271 -1 222 277 161 29 chr17 63649649 63649786 -25854767 + MIR SINE MIR 52 206 -56 1493 194 13 35 chr17 63649847 63650161 -25854392 - AluJo SINE Alu -5 307 1 2124 110 0 10 chr17 63650191 63650482 -25854071 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr17 63650564 63650595 -25853958 + AT_rich Low_complexity Low_complexity 1 31 0 735 173 8 15 chr17 63650597 63650730 -25853823 + FLAM_C SINE Alu 1 132 -1 1154 143 47 82 chr17 63651112 63651391 -25853162 - L1MB3 LINE L1 -7 6176 5908 2306 84 0 0 chr17 63651413 63651698 -25852855 - AluSg SINE Alu -21 289 5 2262 186 66 0 chr17 63651702 63652186 -25852367 - L1MB3 LINE L1 -33 6150 5635 1946 148 0 3 chr17 63653941 63654232 -25850321 - AluJb SINE Alu -22 290 1 356 263 7 24 chr17 63654257 63654408 -25850145 + MIR SINE MIR 45 245 -17 872 232 22 71 chr17 63654611 63654878 -25849675 - MIR SINE MIR 0 262 9 691 139 82 0 chr17 63655660 63655782 -25848771 - MER3 DNA MER1_type -5 204 73 583 233 72 6 chr17 63655758 63655938 -25848615 - MER3 DNA MER1_type -17 192 1 * 1757 155 77 12 chr17 63656134 63656470 -25848083 - MER46B DNA MER2_type -2 234 2 713 181 0 36 chr17 63657025 63657163 -25847390 + AluJo SINE Alu 1 133 -169 270 160 0 0 chr17 63657178 63657228 -25847325 + GA-rich Low_complexity Low_complexity 2 51 0 818 159 16 110 chr17 63657228 63657410 -25847143 + AluJo SINE Alu 134 298 -14 2291 106 0 10 chr17 63657413 63657715 -25846838 + AluSq SINE Alu 2 300 -13 748 278 75 4 chr17 63657874 63658115 -25846438 + MIR SINE MIR 2 259 -3 229 195 0 0 chr17 63658285 63658326 -25846227 - L2 LINE L2 -10 3303 3263 1282 151 79 8 chr17 63660198 63660450 -25844103 + L1PB4 LINE L1 5887 6156 0 2218 110 7 0 chr17 63660467 63660758 -25843795 - AluSx SINE Alu -19 293 1 1908 123 22 4 chr17 63661085 63661393 -25843160 - AluSx SINE Alu 0 313 1 2476 55 7 0 chr17 63661521 63661813 -25842740 + AluY SINE Alu 1 294 -17 363 96 0 0 chr17 63661813 63661865 -25842688 + (TG)n Simple_repeat Simple_repeat 2 53 0 32 43 0 0 chr17 63661878 63661924 -25842629 + AT_rich Low_complexity Low_complexity 1 46 0 1713 197 3 7 chr17 63662015 63662309 -25842244 + AluJb SINE Alu 1 293 -19 450 132 13 0 chr17 63662326 63662402 -25842151 - MER69 DNA AcHobo -3 2523 2447 272 290 130 0 chr17 63662447 63662547 -25842006 - MER69 DNA AcHobo -2282 244 132 1469 161 81 35 chr17 63662547 63662671 -25841882 + AluJo SINE Alu 1 118 -194 2333 91 0 3 chr17 63662671 63662969 -25841584 - AluSg SINE Alu -13 297 1 1469 161 81 35 chr17 63662969 63663129 -25841424 + AluJo SINE Alu 118 298 -14 337 312 78 34 chr17 63663778 63663983 -25840570 + L3b LINE CR1 1149 1362 -221 248 267 76 38 chr17 63664450 63664581 -25839972 + MARNA DNA Mariner 285 420 -166 271 193 70 0 chr17 63664652 63664709 -25839844 - MIR SINE MIR -120 142 82 2167 128 3 0 chr17 63664713 63665018 -25839535 - AluSx SINE Alu -6 306 1 191 35 0 35 chr17 63665021 63665050 -25839503 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2175 119 0 3 chr17 63665063 63665358 -25839195 - AluSx SINE Alu -18 294 1 902 165 0 0 chr17 63665361 63665494 -25839059 - AluJo/FLAM SINE Alu -179 133 1 276 143 0 0 chr17 63665570 63665626 -25838927 - L1MB4 LINE L1 0 6180 6125 * 7742 175 22 64 chr17 63665621 63666140 -25838413 - L1MA6 LINE L1 0 7719 7180 270 0 0 0 chr17 63666140 63666170 -25838383 + (TG)n Simple_repeat Simple_repeat 2 31 0 7742 175 22 64 chr17 63666170 63668102 -25836451 - L1MA6 LINE L1 -539 7180 5169 1204 22 0 0 chr17 63668102 63668237 -25836316 - SVA Other Other -3 1383 1249 2066 90 7 21 chr17 63668239 63668528 -25836025 - AluSx SINE Alu -27 285 1 7742 175 22 64 chr17 63668528 63668700 -25835853 - L1MA6 LINE L1 -2551 5168 5186 2016 128 0 14 chr17 63668700 63669029 -25835524 - AluSp SINE Alu 0 325 1 7742 175 22 64 chr17 63669029 63669283 -25835270 - L1MA6 LINE L1 -2532 5187 4924 1053 186 0 0 chr17 63669288 63669460 -25835093 - AluJ SINE Alu -12 300 129 949 172 0 0 chr17 63669667 63669812 -25834741 - AluJ SINE Alu -167 145 1 5128 181 38 53 chr17 63669815 63670061 -25834492 - L1MA6 LINE L1 -2639 4926 4678 1641 162 36 23 chr17 63670061 63670369 -25834184 - AluJo SINE Alu 0 312 1 5128 181 38 53 chr17 63670369 63671247 -25833306 - L1MA6 LINE L1 -2887 4678 3788 2283 98 3 0 chr17 63671247 63671534 -25833019 - AluSq SINE Alu -25 288 1 5128 181 38 53 chr17 63671534 63671573 -25832980 - L1MA6 LINE L1 -3777 3788 3750 2463 84 3 0 chr17 63671573 63671870 -25832683 - AluSp SINE Alu -15 298 1 5128 181 38 53 chr17 63671870 63671978 -25832575 - L1MA6 LINE L1 -3815 3750 3642 2248 123 0 10 chr17 63671978 63672287 -25832266 - AluSx SINE Alu -6 306 1 2783 10 0 0 chr17 63672297 63672600 -25831953 - AluYa5 SINE Alu -8 303 1 5128 181 38 53 chr17 63672600 63672626 -25831927 - L1MA6 LINE L1 -3932 3633 3608 2092 131 0 0 chr17 63672626 63672923 -25831630 - AluSx SINE Alu -14 298 2 5128 181 38 53 chr17 63672923 63674158 -25830395 - L1MA6 LINE L1 -3957 3608 2426 1860 130 60 3 chr17 63674187 63674471 -25830082 - AluSx SINE Alu -10 302 3 2008 288 32 42 chr17 63674472 63675207 -25829346 - L1MA6 LINE L1 -5467 2098 1357 2250 107 0 0 chr17 63675207 63675496 -25829057 - AluSg SINE Alu -21 289 1 2008 288 32 42 chr17 63675496 63676169 -25828384 - L1MA6 LINE L1 -6208 1357 17 2300 96 3 7 chr17 63676184 63676487 -25828066 - AluSq SINE Alu -11 302 1 3871 172 43 42 chr17 63676487 63676909 -25827644 - L1MB2 LINE L1 -40 6131 5711 746 188 8 8 chr17 63676909 63677042 -25827511 - FLAM_A SINE Alu 0 133 1 3871 172 43 42 chr17 63677042 63678366 -25826187 - L1MB2 LINE L1 -460 5711 4378 323 296 56 0 chr17 63678520 63678645 -25825908 + MARNA DNA Mariner 439 570 -16 1952 131 13 42 chr17 63679036 63679168 -25825385 + AluSg SINE Alu 4 138 -172 2135 65 4 4 chr17 63679168 63679429 -25825124 + AluY SINE Alu 35 295 -16 1952 131 13 42 chr17 63679429 63679609 -25824944 + AluSg SINE Alu 138 307 -3 1049 236 51 12 chr17 63679665 63679999 -25824554 + L1M4 LINE L1 3803 4149 -1997 368 290 114 23 chr17 63680003 63680179 -25824374 - MLT1J LTR MaLR -317 194 3 2239 176 37 39 chr17 63680754 63681374 -25823179 - L1MB2 LINE L1 -2929 3217 2599 779 313 66 73 chr17 63681378 63681954 -25822599 - L1MEd LINE L1 -5021 1098 527 297 249 135 78 chr17 63682376 63682559 -25821994 - HAL1 LINE L1 -1233 1274 1103 2363 88 3 0 chr17 63682559 63682854 -25821699 + AluSp SINE Alu 1 296 -17 297 249 135 78 chr17 63682854 63683160 -25821393 - HAL1 LINE L1 -1404 1103 757 1640 149 34 65 chr17 63683190 63683511 -25821042 - AluJo SINE Alu -1 311 1 1660 202 22 0 chr17 63683900 63684217 -25820336 - MER7A DNA MER2_type -1 345 24 711 271 92 32 chr17 63684269 63684583 -25819970 + L1ME LINE L1 5482 5814 -307 437 286 71 15 chr17 63686174 63686329 -25818224 + MIR SINE MIR 1 163 -45 2350 62 45 0 chr17 63686425 63686714 -25817839 - AluY SINE Alu -9 302 1 2037 132 7 0 chr17 63686770 63687078 -25817475 - AluSx SINE Alu 0 310 1 3891 277 124 39 chr17 63687079 63687491 -25817062 + L2 LINE L2 1206 1582 -1731 1736 171 11 0 chr17 63687491 63687771 -25816782 - AluJb SINE Alu -29 283 1 1882 102 102 11 chr17 63687774 63688049 -25816504 - AluSc SINE Alu -9 300 1 3891 277 124 39 chr17 63688049 63688132 -25816421 + L2 LINE L2 1583 1658 -1655 2390 91 3 0 chr17 63688132 63688441 -25816112 + AluSq SINE Alu 1 310 -3 3891 277 124 39 chr17 63688441 63689056 -25815497 + L2 LINE L2 1658 2219 -1094 1634 165 64 0 chr17 63689056 63689322 -25815231 + AluJb SINE Alu 1 283 -29 279 0 0 0 chr17 63689323 63689354 -25815199 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 3891 277 124 39 chr17 63689354 63690172 -25814381 + L2 LINE L2 2218 3313 0 862 160 107 5 chr17 63690258 63690464 -25814089 - L1MB3 LINE L1 -7 6176 5950 264 231 0 64 chr17 63690556 63690634 -25813919 - L2 LINE L2 -5 3267 3195 296 140 0 0 chr17 63690748 63690797 -25813756 - MLT2B3 LTR ERVL 0 520 472 377 178 14 27 chr17 63690797 63690870 -25813683 + MER7A DNA MER2_type 3 74 -274 1748 163 33 24 chr17 63690870 63691077 -25813476 + MER7A DNA MER2_type 15 226 -2812 2010 123 88 18 chr17 63691077 63691417 -25813136 - THE1B LTR MaLR 0 364 1 1748 163 33 24 chr17 63691417 63691540 -25813013 + MER7A DNA MER2_type 226 346 0 2061 195 69 41 chr17 63691554 63691981 -25812572 - MLT2B3 LTR ERVL -46 508 64 2040 132 7 13 chr17 63691981 63692308 -25812245 + AluSx SINE Alu 1 312 0 2061 195 69 41 chr17 63692308 63692373 -25812180 - MLT2B3 LTR ERVL -490 64 2 2255 88 17 3 chr17 63692495 63692792 -25811761 - AluSq SINE Alu -12 301 1 919 163 50 0 chr17 63692802 63692962 -25811591 - AluJb SINE Alu -10 302 135 4069 159 20 29 chr17 63692963 63693681 -25810872 - L1MB5 LINE L1 -33 6141 5429 2477 71 0 0 chr17 63693681 63693978 -25810575 - AluY SINE Alu -14 297 1 4069 159 20 29 chr17 63693978 63694062 -25810491 - L1MB5 LINE L1 -745 5429 5346 1628 197 30 12 chr17 63694168 63694498 -25810055 + MER58B DNA MER1_type 2 337 -4 29 28 0 0 chr17 63694981 63695017 -25809536 + AT_rich Low_complexity Low_complexity 1 36 0 1817 136 22 48 chr17 63695070 63695386 -25809167 - AluJb SINE Alu -4 308 1 749 179 0 66 chr17 63696382 63696533 -25808020 + MER5B DNA MER1_type 38 178 0 271 102 0 20 chr17 63696709 63696758 -25807795 - L1MB4 LINE L1 -7 6173 6126 882 194 94 0 chr17 63696767 63696927 -25807626 - FAM SINE Alu 0 175 1 2281 88 3 26 chr17 63696936 63697241 -25807312 - AluSq SINE Alu -15 298 1 1361 105 125 62 chr17 63697242 63697546 -25807007 - L1MB3 LINE L1 -41 6142 5820 1054 136 0 0 chr17 63697548 63697718 -25806835 - AluJo/FRAM SINE Alu 0 306 137 2213 108 3 0 chr17 63697718 63698026 -25806527 - AluY SINE Alu -13 298 1 810 149 17 6 chr17 63698031 63698184 -25806369 - L1PA15 LINE L1 -340 5825 5665 2239 92 27 3 chr17 63698578 63698873 -25805680 + AluSg SINE Alu 1 302 -8 2252 116 0 0 chr17 63699361 63699662 -25804891 + AluSq SINE Alu 1 301 -12 988 189 156 0 chr17 63702374 63702618 -25801935 - L1MB4 LINE L1 0 6180 5899 410 216 0 17 chr17 63702618 63702734 -25801819 + (TATATG)n Simple_repeat Simple_repeat 6 119 0 2411 70 0 10 chr17 63702736 63703035 -25801518 - AluSp SINE Alu -17 296 1 508 242 40 0 chr17 63703042 63703166 -25801387 - FLAM_A SINE Alu -4 129 1 1881 168 3 0 chr17 63703259 63703568 -25800985 - AluJb SINE Alu -2 310 1 490 208 0 0 chr17 63703568 63703665 -25800888 - L1MB4 LINE L1 -300 5878 5779 470 183 0 78 chr17 63703665 63703780 -25800773 - Tigger7 DNA MER2_type 0 2487 2382 * 2711 154 66 53 chr17 63703759 63703802 -25800751 - Tigger7 DNA MER2_type -212 521 480 2585 50 0 19 chr17 63703802 63704119 -25800434 - AluY SINE Alu 0 311 1 2172 119 0 13 chr17 63704127 63704438 -25800115 - AluSx SINE Alu -5 307 1 2711 154 66 53 chr17 63704438 63704898 -25799655 - Tigger7 DNA MER2_type -259 474 2 234 21 0 188 chr17 63704903 63704933 -25799620 - L1M4 LINE L1 -405 5779 5759 3298 143 64 4 chr17 63704933 63705430 -25799123 + MER1A DNA MER1_type 1 527 0 234 21 0 188 chr17 63705430 63705447 -25799106 - L1M4 LINE L1 -424 5760 5741 2330 57 11 0 chr17 63705462 63705763 -25798790 - AluSq SINE Alu 0 304 1 1748 140 20 45 chr17 63705766 63706058 -25798495 - AluJb SINE Alu -17 295 11 509 209 0 0 chr17 63706058 63706144 -25798409 - FRAM SINE Alu -55 121 36 1809 120 32 42 chr17 63706162 63706475 -25798078 - AluSx SINE Alu 0 311 2 2186 132 3 0 chr17 63706483 63706787 -25797766 - AluSx SINE Alu -7 305 1 2443 83 0 3 chr17 63707959 63708271 -25796282 - AluY SINE Alu 0 311 1 983 169 135 46 chr17 63708452 63708689 -25795864 + AluJo SINE Alu 1 258 -54 2537 59 0 0 chr17 63708754 63709059 -25795494 - AluY SINE Alu -6 305 1 1961 142 21 0 chr17 63709059 63709347 -25795206 - AluJb SINE Alu -18 294 1 1128 244 54 57 chr17 63709648 63709881 -25794672 + MLT1H1 LTR MaLR 1 234 -321 2381 90 0 0 chr17 63709881 63710180 -25794373 + AluSg SINE Alu 1 299 -11 1128 244 54 57 chr17 63710180 63710282 -25794271 + MLT1H1 LTR MaLR 234 335 -220 575 217 121 24 chr17 63710372 63710579 -25793974 + MLT1H1 LTR MaLR 316 542 0 22 0 0 0 chr17 63711034 63711056 -25793497 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 63711680 63711701 -25792852 + AT_rich Low_complexity Low_complexity 1 21 0 1915 114 121 0 chr17 63712362 63712626 -25791927 + AluSg SINE Alu 1 296 -4 1605 94 49 18 chr17 63712636 63712859 -25791694 - MER30 DNA MER1_type 0 230 1 32 26 0 0 chr17 63712888 63712927 -25791626 + AT_rich Low_complexity Low_complexity 1 39 0 2022 135 0 17 chr17 63713236 63713533 -25791020 - AluJb SINE Alu -20 292 1 2295 114 58 3 chr17 63713656 63713999 -25790554 - L1MC2 LINE L1 -8 6336 5975 2105 128 3 0 chr17 63714183 63714480 -25790073 + AluSc SINE Alu 5 302 -7 741 259 121 68 chr17 63714485 63714914 -25789639 - LTR33A LTR ERVL -65 458 7 2000 187 33 94 chr17 63714986 63715047 -25789506 - L1ME2 LINE L1 -5 6159 6096 1152 151 18 0 chr17 63715047 63715213 -25789340 - FAM SINE Alu -6 169 1 2000 187 33 94 chr17 63715213 63715728 -25788825 - L1ME2 LINE L1 -68 6096 5618 2675 45 0 0 chr17 63715920 63716231 -25788322 - AluY SINE Alu 0 311 1 745 150 71 0 chr17 63716249 63716362 -25788191 - FLAM_C SINE Alu -12 121 1 2387 93 0 6 chr17 63717685 63717998 -25786555 + AluSq SINE Alu 1 311 -2 338 244 74 81 chr17 63718103 63718208 -25786345 + MIR SINE MIR 38 141 -120 2356 72 10 0 chr17 63718208 63718501 -25786052 + AluSq SINE Alu 1 296 -17 338 244 74 81 chr17 63718501 63718557 -25785996 + MIR SINE MIR 141 196 -65 23 33 0 0 chr17 63719278 63719308 -25785245 + GC_rich Low_complexity Low_complexity 1 30 0 426 127 0 0 chr17 63719575 63719646 -25784907 + (CCCGAA)n Simple_repeat Simple_repeat 3 73 0 270 230 0 0 chr17 63719716 63719790 -25784763 + GA-rich Low_complexity Low_complexity 1 74 0 238 241 0 0 chr17 63719830 63719884 -25784669 + (CCG)n Simple_repeat Simple_repeat 2 55 0 210 292 0 54 chr17 63720128 63720258 -25784295 + C-rich Low_complexity Low_complexity 2 124 0 298 187 0 27 chr17 63721344 63721419 -25783134 - L1ME4a LINE L1 -68 6053 5981 2298 88 3 0 chr17 63721740 63722034 -25782519 + AluSg SINE Alu 1 295 -15 1751 148 37 7 chr17 63722290 63722561 -25781992 + AluSx SINE Alu 2 280 -32 902 152 79 18 chr17 63722592 63722757 -25781796 + AluJb SINE Alu 118 292 -20 253 334 195 24 chr17 63723549 63724016 -25780537 + L2 LINE L2 2028 2574 -740 789 241 76 58 chr17 63724247 63724553 -25780000 - MER77 LTR ERV1 -4 601 313 442 200 11 22 chr17 63724561 63724651 -25779902 - FLAM_A SINE Alu -9 133 45 359 259 15 37 chr17 63724670 63724850 -25779703 - MER77 LTR ERV1 -326 279 53 306 312 34 104 chr17 63724969 63725267 -25779286 + L2 LINE L2 2835 3111 -161 1141 249 113 39 chr17 63725334 63725708 -25778845 + Charlie7 DNA MER1_type 1 417 -2195 1643 144 140 0 chr17 63725708 63725965 -25778588 + AluJo SINE Alu 1 293 -9 1141 249 113 39 chr17 63725965 63726048 -25778505 + Charlie7 DNA MER1_type 417 492 -2120 2794 7 0 3 chr17 63726107 63726409 -25778144 + AluYa5 SINE Alu 1 301 -10 404 271 33 0 chr17 63726453 63726575 -25777978 - L1ME4a LINE L1 -318 5852 5727 1394 223 55 41 chr17 63726586 63726950 -25777603 - MLT1J1 LTR MaLR -8 438 70 380 283 178 5 chr17 63727043 63727229 -25777324 - L1ME4a LINE L1 -470 5692 5493 1405 167 44 7 chr17 63727440 63727733 -25776820 - MER33 DNA MER1_type -7 317 14 26 0 0 0 chr17 63727821 63727847 -25776706 + AT_rich Low_complexity Low_complexity 1 26 0 252 182 0 0 chr17 63727912 63727956 -25776597 + Alu SINE Alu 2 45 -258 821 174 0 0 chr17 63727961 63728093 -25776460 - AluJo/FRAM SINE Alu -46 266 135 1761 152 83 7 chr17 63728095 63728385 -25776168 - AluJb SINE Alu 0 312 1 2258 120 3 0 chr17 63728658 63728967 -25775586 - AluSg SINE Alu 0 310 1 2201 121 3 0 chr17 63729365 63729671 -25774882 - AluSx SINE Alu -5 307 1 2429 89 0 0 chr17 63729688 63729991 -25774562 - AluSg SINE Alu -7 303 1 243 0 0 0 chr17 63730098 63730125 -25774428 + (CA)n Simple_repeat Simple_repeat 2 28 0 467 286 70 40 chr17 63730675 63730874 -25773679 - MIR SINE MIR -27 235 31 268 404 0 0 chr17 63730973 63731082 -25773471 + L2 LINE L2 2568 2676 -638 2348 71 3 0 chr17 63731128 63731433 -25773120 - AluSp SINE Alu 0 306 1 2076 129 0 3 chr17 63731448 63731743 -25772810 - AluSx SINE Alu -18 294 1 758 150 16 39 chr17 63731744 63731871 -25772682 - AluJo/FLAM SINE Alu -178 124 1 188 288 38 38 chr17 63731877 63731957 -25772596 + L2 LINE L2 2894 2973 -299 2213 126 3 0 chr17 63732150 63732460 -25772093 - AluSp SINE Alu -2 311 1 1698 149 0 68 chr17 63732804 63733112 -25771441 + AluJb SINE Alu 1 287 -25 2179 146 0 0 chr17 63733236 63733544 -25771009 + AluSx SINE Alu 1 308 -4 918 200 11 17 chr17 63733871 63734046 -25770507 + FAM SINE Alu 1 174 -1 2187 98 0 0 chr17 63734347 63734624 -25769929 - AluSc SINE Alu -10 299 23 200 163 23 0 chr17 63734730 63734773 -25769780 + T-rich Low_complexity Low_complexity 2 45 0 1475 284 71 26 chr17 63734801 63734818 -25769735 - HAL1 LINE L1 -116 2391 2376 2240 113 3 0 chr17 63734818 63735128 -25769425 - AluSp SINE Alu -2 311 1 1475 284 71 26 chr17 63735128 63735398 -25769155 - HAL1 LINE L1 -131 2376 2120 2461 81 3 0 chr17 63735398 63735706 -25768847 - AluSp SINE Alu -4 309 1 1475 284 71 26 chr17 63735706 63736106 -25768447 - HAL1 LINE L1 -387 2120 1672 298 164 19 125 chr17 63736142 63736246 -25768307 - HAL1 LINE L1 -823 1684 1592 384 215 3 5 chr17 63736247 63736324 -25768229 + AluS SINE Alu 1 61 -247 2226 120 0 0 chr17 63736488 63736789 -25767764 + AluSx SINE Alu 1 301 -11 396 256 138 6 chr17 63737238 63737476 -25767077 + L1MC4a LINE L1 5199 5476 -752 1389 133 43 5 chr17 63737492 63737702 -25766851 - AluJb SINE Alu -94 218 1 618 304 55 40 chr17 63737706 63738052 -25766501 + L1MC4a LINE L1 5523 5873 -1935 369 259 74 0 chr17 63738348 63738456 -25766097 - MER112 DNA MER1_type -11 249 134 2245 101 14 3 chr17 63738456 63738753 -25765800 + AluSq SINE Alu 1 300 -13 1901 116 0 0 chr17 63738897 63739148 -25765405 + AluSc SINE Alu 45 295 -14 26 0 0 0 chr17 63739492 63739518 -25765035 + AT_rich Low_complexity Low_complexity 1 26 0 2193 131 0 0 chr17 63739664 63739969 -25764584 + AluSx SINE Alu 1 305 -7 484 221 21 21 chr17 63740041 63740186 -25764367 + L1MC5 LINE L1 7092 7236 -725 244 122 76 206 chr17 63740253 63740317 -25764236 + L1MC5 LINE L1 7226 7266 -695 2441 77 3 0 chr17 63740317 63740614 -25763939 + AluSc SINE Alu 1 298 -11 244 122 76 206 chr17 63740614 63740680 -25763873 + L1MC5 LINE L1 7266 7339 -622 1266 185 49 0 chr17 63740683 63740948 -25763605 + MER33 DNA MER1_type 25 302 -22 496 239 45 19 chr17 63740983 63741138 -25763415 + L1MC5 LINE L1 7330 7488 -473 1421 174 50 14 chr17 63741139 63741421 -25763132 + AluJb SINE Alu 1 292 -20 1643 158 41 38 chr17 63741433 63741724 -25762829 + AluJo SINE Alu 1 292 -20 383 213 88 73 chr17 63741724 63741860 -25762693 + L1MC5 LINE L1 7654 7791 -170 996 173 18 80 chr17 63741976 63742201 -25762352 + L1MB7 LINE L1 5970 6180 -4 237 250 18 0 chr17 63742220 63742276 -25762277 + CT-rich Low_complexity Low_complexity 1 57 0 645 257 128 29 chr17 63742302 63742749 -25761804 + L1M4 LINE L1 4408 4898 -1248 866 285 54 14 chr17 63742782 63743223 -25761330 - L1ME LINE L1 -521 5641 5170 671 182 83 0 chr17 63743214 63743346 -25761207 - L1MB7 LINE L1 0 6184 6042 * 246 179 119 24 chr17 63743610 63743694 -25760859 - L1MC5 LINE L1 -37 7924 7833 2201 105 3 22 chr17 63743818 63744133 -25760420 + AluSg SINE Alu 1 309 -1 2170 112 0 32 chr17 63744938 63745250 -25759303 - AluSx SINE Alu -10 302 1 224 358 105 21 chr17 63745692 63745977 -25758576 + L3 LINE CR1 661 969 -608 300 288 0 0 chr17 63746157 63746230 -25758323 + L3 LINE CR1 1360 1432 -145 2153 113 0 10 chr17 63746248 63746549 -25758004 - AluSx SINE Alu -14 298 1 239 0 32 0 chr17 63746549 63746580 -25757973 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 2047 114 4 4 chr17 63746580 63746861 -25757692 - AluSx SINE Alu -31 281 1 2236 157 64 51 chr17 63746949 63747043 -25757510 - L1M4 LINE L1 -743 5403 5312 2341 88 0 28 chr17 63747043 63747361 -25757192 - AluSc SINE Alu 0 309 1 2236 157 64 51 chr17 63747361 63747795 -25756758 - L1M4 LINE L1 -834 5312 4868 1374 172 109 4 chr17 63747822 63747997 -25756556 - AluJo SINE Alu 0 322 167 288 0 0 0 chr17 63747997 63748029 -25756524 + (TA)n Simple_repeat Simple_repeat 1 32 0 1374 172 109 4 chr17 63748029 63748148 -25756405 - AluJo SINE Alu -155 167 1 30 0 0 0 chr17 63748153 63748183 -25756370 + AT_rich Low_complexity Low_complexity 1 30 0 4461 153 11 39 chr17 63748219 63748554 -25755999 - MER44D DNA MER2_type -1889 598 422 2488 67 0 0 chr17 63748554 63748852 -25755701 - AluY SINE Alu -13 298 1 4461 153 11 39 chr17 63748852 63749263 -25755290 - MER44D DNA MER2_type -2065 422 1 354 306 81 11 chr17 63749292 63749478 -25755075 - L1ME4a LINE L1 -288 5833 5635 406 292 44 9 chr17 63749660 63749773 -25754780 - MIR SINE MIR -110 152 36 213 121 0 0 chr17 63749911 63749944 -25754609 + (T)n Simple_repeat Simple_repeat 1 33 0 2543 65 3 0 chr17 63750165 63750475 -25754078 + AluY SINE Alu 1 311 0 294 291 25 0 chr17 63750931 63751010 -25753543 - 7SK RNA RNA -112 81 1 198 0 0 0 chr17 63751735 63751757 -25752796 + (TA)n Simple_repeat Simple_repeat 1 22 0 211 289 79 13 chr17 63752034 63752110 -25752443 - L2 LINE L2 -18 3254 3174 1278 193 34 21 chr17 63752110 63752349 -25752204 - AluJo SINE Alu -69 243 2 771 248 140 73 chr17 63752465 63752889 -25751664 + MLT1H1 LTR MaLR 32 493 -62 2240 101 0 7 chr17 63752889 63753186 -25751367 - AluSx SINE Alu -17 295 1 771 248 140 73 chr17 63753186 63753240 -25751313 + MLT1H1 LTR MaLR 493 542 -13 203 342 89 0 chr17 63753383 63753462 -25751091 + L2 LINE L2 3137 3222 -50 1773 142 7 34 chr17 63754237 63754643 -25749910 - AluJb SINE Alu 0 398 1 2395 96 13 0 chr17 63754739 63755042 -25749511 - AluSc SINE Alu -2 307 1 25 40 0 20 chr17 63755334 63755357 -25749196 + AT_rich Low_complexity Low_complexity 1 23 -26 2398 75 0 3 chr17 63755357 63755650 -25748903 - AluY SINE Alu -19 292 1 25 40 0 20 chr17 63755650 63755676 -25748877 + AT_rich Low_complexity Low_complexity 23 49 0 1661 168 42 3 chr17 63755842 63755993 -25748560 - AluJo SINE Alu -16 296 152 1732 126 0 8 chr17 63755993 63756239 -25748314 - AluSq SINE Alu -69 244 1 1661 168 42 3 chr17 63756239 63756372 -25748181 - AluJo SINE Alu -160 152 1 22 0 0 0 chr17 63756373 63756395 -25748158 + AT_rich Low_complexity Low_complexity 1 22 0 1799 106 23 0 chr17 63756411 63756667 -25747886 - L1PA15 LINE L1 -8 6157 5896 2224 81 44 0 chr17 63756788 63757084 -25747469 + AluSc SINE Alu 1 309 0 351 385 95 0 chr17 63757230 63757378 -25747175 - L2 LINE L2 -4 3268 3107 624 245 38 31 chr17 63757427 63757586 -25746967 - MIR SINE MIR -101 161 2 2403 79 3 0 chr17 63757609 63757900 -25746653 + AluSc SINE Alu 1 292 -17 340 351 23 8 chr17 63757969 63758100 -25746453 - L2 LINE L2 -238 3034 2902 248 340 100 89 chr17 63758864 63759123 -25745430 + L2 LINE L2 3006 3267 -5 317 233 33 153 chr17 63759158 63759312 -25745241 + MER5A DNA MER1_type 1 123 -66 2166 109 0 0 chr17 63759312 63759595 -25744958 + AluSq SINE Alu 1 283 -30 317 233 33 153 chr17 63759595 63759655 -25744898 + MER5A DNA MER1_type 123 189 0 2066 108 0 0 chr17 63760288 63760567 -25743986 - AluSc SINE Alu -14 295 17 829 305 66 0 chr17 63760631 63760857 -25743696 - MIR SINE MIR -21 241 1 2910 13 0 0 chr17 63761065 63761382 -25743171 + AluYb8 SINE Alu 1 317 -1 194 0 39 0 chr17 63761460 63761486 -25743067 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1810 129 50 11 chr17 63761486 63761766 -25742787 + AluJo SINE Alu 1 291 -21 1518 172 31 35 chr17 63762382 63762672 -25741881 + AluJo SINE Alu 1 289 -23 360 250 138 35 chr17 63763189 63763305 -25741248 + L2 LINE L2 3181 3308 -5 826 205 0 26 chr17 63763375 63763531 -25741022 - AluJb SINE Alu -26 286 135 2181 123 0 0 chr17 63763531 63763831 -25740722 - AluSx SINE Alu -12 300 1 1792 145 0 78 chr17 63763834 63764165 -25740388 - AluSx SINE Alu -7 305 1 1078 38 6 88 chr17 63764845 63764875 -25739678 + L1PB1 LINE L1 6005 6036 -115 2310 96 3 0 chr17 63764875 63765176 -25739377 + AluSp SINE Alu 1 302 -11 1078 38 6 88 chr17 63765176 63765305 -25739248 + L1PB1 LINE L1 6036 6151 0 21 0 0 0 chr17 63765307 63765328 -25739225 + AT_rich Low_complexity Low_complexity 1 21 0 1960 89 75 29 chr17 63765328 63765677 -25738876 + L1MA4A LINE L1 5937 6301 -2 1809 179 10 0 chr17 63766197 63766504 -25738049 + AluJo SINE Alu 1 310 -2 741 219 115 0 chr17 63766719 63766902 -25737651 + MER20 DNA MER1_type 1 204 -15 6411 170 11 40 chr17 63766902 63768334 -25736219 + L1 LINE L1 3707 5095 -1051 2119 136 0 10 chr17 63768367 63768675 -25735878 + AluSx SINE Alu 1 305 -7 2193 110 0 7 chr17 63768684 63768984 -25735569 + AluSc SINE Alu 1 298 -11 2203 232 251 40 chr17 63768998 63770303 -25734250 + L1ME2 LINE L1 2367 3947 -2199 2689 207 60 67 chr17 63770324 63770545 -25734008 + L1ME2 LINE L1 4518 4739 -1425 1832 147 3 23 chr17 63770545 63770681 -25733872 + AluJb SINE Alu 1 138 -174 2216 112 0 3 chr17 63770681 63770976 -25733577 + AluSx SINE Alu 1 294 -18 1832 147 3 23 chr17 63770976 63771138 -25733415 + AluJb SINE Alu 138 293 -19 2689 207 60 67 chr17 63771138 63771430 -25733123 + L1ME2 LINE L1 4739 5031 -1133 2169 136 3 7 chr17 63771430 63771740 -25732813 + AluSx SINE Alu 1 309 -3 2689 207 60 67 chr17 63771740 63771902 -25732651 + L1ME2 LINE L1 5031 5193 -971 2354 92 13 0 chr17 63771902 63772205 -25732348 + AluSg SINE Alu 1 307 -3 2689 207 60 67 chr17 63772205 63773206 -25731347 + L1ME2 LINE L1 5193 6163 -1 2173 106 10 7 chr17 63773307 63773599 -25730954 - AluSq SINE Alu -20 293 1 1920 125 29 45 chr17 63773837 63774148 -25730405 - AluSx SINE Alu -6 306 1 402 304 20 0 chr17 63775756 63775858 -25728695 + MIR SINE MIR 48 151 -111 1088 201 0 44 chr17 63775934 63776163 -25728390 - MER58A DNA MER1_type 0 224 6 29 60 0 0 chr17 63777226 63777276 -25727277 + AT_rich Low_complexity Low_complexity 1 50 0 2332 106 0 0 chr17 63777303 63777605 -25726948 - AluSg SINE Alu -8 302 1 3252 123 19 48 chr17 63777663 63778017 -25726536 - L1MB4 LINE L1 -13 6167 5804 507 17 0 0 chr17 63778017 63778077 -25726476 + (TA)n Simple_repeat Simple_repeat 2 61 0 1705 168 17 10 chr17 63778077 63778375 -25726178 - AluJb SINE Alu -12 300 1 3252 123 19 48 chr17 63778375 63778647 -25725906 - L1MB4 LINE L1 -374 5806 5558 2333 46 43 0 chr17 63779038 63779320 -25725233 - AluY SINE Alu -17 294 1 469 243 53 90 chr17 63779442 63779631 -25724922 - MIR SINE MIR -15 247 66 226 309 0 0 chr17 63780081 63780136 -25724417 + L2 LINE L2 3251 3305 -8 621 252 7 7 chr17 63780137 63780280 -25724273 + FAM SINE Alu 1 143 -42 2066 125 7 10 chr17 63780425 63780730 -25723823 - AluSx SINE Alu -8 304 1 2379 127 38 35 chr17 63780791 63781036 -25723517 - MSTA LTR MaLR 0 428 179 2000 131 0 0 chr17 63781036 63781357 -25723196 + AluSx SINE Alu 1 321 0 2379 127 38 35 chr17 63781357 63781537 -25723016 - MSTA LTR MaLR -249 179 1 687 268 36 40 chr17 63781540 63781790 -25722763 + MIR SINE MIR 11 259 -3 33 43 0 0 chr17 63782047 63782094 -25722459 + AT_rich Low_complexity Low_complexity 1 47 0 30 0 0 0 chr17 63782322 63782352 -25722201 + AT_rich Low_complexity Low_complexity 1 30 0 249 57 0 0 chr17 63782365 63782400 -25722153 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2461 49 0 0 chr17 63782404 63782691 -25721862 - AluY SINE Alu -24 287 1 467 0 35 0 chr17 63783601 63783659 -25720894 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2333 84 0 0 chr17 63785007 63785311 -25719242 - AluY SINE Alu 0 304 1 24 32 0 0 chr17 63785499 63785530 -25719023 + AT_rich Low_complexity Low_complexity 1 31 0 2299 68 3 62 chr17 63785864 63786189 -25718364 - AluY SINE Alu -5 306 1 544 147 0 0 chr17 63786257 63786359 -25718194 + L1PB1 LINE L1 5946 6047 -104 1750 74 5 0 chr17 63786459 63786674 -25717879 - AluY SINE Alu -95 216 1 258 235 0 29 chr17 63786674 63786742 -25717811 - HAL1 LINE L1 -983 1524 1459 2110 142 3 0 chr17 63786743 63787053 -25717500 - AluSx SINE Alu -1 311 1 2195 123 3 3 chr17 63787067 63787369 -25717184 - AluY SINE Alu -1 310 9 366 326 96 38 chr17 63787453 63787984 -25716569 - HAL1 LINE L1 -1945 562 1 990 324 93 5 chr17 63788003 63788410 -25716143 - L3 LINE CR1 -110 1467 1025 4373 143 28 80 chr17 63788681 63788877 -25715676 - L1PA16 LINE L1 -10 6349 6144 1543 151 7 47 chr17 63788877 63789156 -25715397 - AluSx SINE Alu -6 306 39 4373 143 28 80 chr17 63789156 63790145 -25714408 - L1PA16 LINE L1 -215 6144 5320 186 43 0 0 chr17 63790203 63790226 -25714327 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2851 224 35 20 chr17 63790290 63791127 -25713426 - L1M4 LINE L1 -816 5330 4476 1872 171 0 13 chr17 63791127 63791431 -25713122 + AluJb SINE Alu 1 300 -12 2851 224 35 20 chr17 63791431 63791528 -25713025 - L1M4 LINE L1 -1670 4476 4382 21 36 0 0 chr17 63791578 63791606 -25712947 + AT_rich Low_complexity Low_complexity 1 28 0 772 177 8 8 chr17 63791608 63791732 -25712821 + FLAM_C SINE Alu 3 126 -17 1526 122 0 14 chr17 63791742 63791963 -25712590 + AluJo SINE Alu 91 308 -4 469 115 90 0 chr17 63791967 63792045 -25712508 + U6 snRNA snRNA 1 85 -22 541 246 22 58 chr17 63792067 63792205 -25712348 - MIR SINE MIR -128 134 2 731 145 73 0 chr17 63792417 63792541 -25712012 + AluJo SINE Alu 1 133 -169 233 103 0 26 chr17 63792541 63792580 -25711973 - Alu SINE Alu -262 40 3 1037 164 5 58 chr17 63792580 63792787 -25711766 + AluJo SINE Alu 116 311 -1 339 25 0 0 chr17 63792825 63792865 -25711688 + (CA)n Simple_repeat Simple_repeat 2 41 0 2014 151 0 0 chr17 63793004 63793302 -25711251 - AluSx SINE Alu -14 298 1 5123 176 41 40 chr17 63793540 63794697 -25709856 + L1MC3 LINE L1 4978 5067 -1079 633 163 0 128 chr17 63794697 63794838 -25709715 + FLAM_A SINE Alu 5 127 -6 5123 176 41 40 chr17 63794838 63795174 -25709379 + L1MC3 LINE L1 5067 5401 -745 852 209 80 4 chr17 63795179 63795404 -25709149 + L1MC3 LINE L1 6404 6645 -1140 2087 219 67 20 chr17 63795433 63795969 -25708584 - MER77 LTR ERV1 -7 598 63 3136 166 92 114 chr17 63795973 63796289 -25708264 + L1MC3 LINE L1 6691 7013 -772 1285 191 129 35 chr17 63796289 63796630 -25707923 - MER83C LTR ERV1 0 373 1 3136 166 92 114 chr17 63796630 63796727 -25707826 + L1MC3 LINE L1 7013 7111 -674 266 194 56 28 chr17 63796727 63796799 -25707754 + MLT1F1 LTR MaLR 35 108 -459 3136 166 92 114 chr17 63796799 63797026 -25707527 + L1MC3 LINE L1 7111 7342 -443 2027 119 0 63 chr17 63797026 63797207 -25707346 - AluSx SINE Alu -13 299 145 2209 125 0 3 chr17 63797207 63797511 -25707042 - AluSg SINE Alu -7 303 1 2027 119 0 63 chr17 63797511 63797648 -25706905 - AluSx SINE Alu -167 145 1 3136 166 92 114 chr17 63797648 63798027 -25706526 + L1MC3 LINE L1 7342 7758 -27 1057 106 0 0 chr17 63798027 63798159 -25706394 + AluSx SINE Alu 1 132 -181 2189 113 3 3 chr17 63798161 63798454 -25706099 + AluSq SINE Alu 1 293 -20 21 36 0 0 chr17 63798469 63798497 -25706056 + AT_rich Low_complexity Low_complexity 1 28 0 1835 80 6 130 chr17 63798507 63798845 -25705708 + AluY SINE Alu 1 296 -15 1106 126 40 11 chr17 63798862 63799036 -25705517 + AluSx SINE Alu 122 300 -12 1678 161 3 21 chr17 63799047 63799355 -25705198 + AluJb SINE Alu 1 303 0 22 56 0 0 chr17 63799789 63799825 -25704728 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr17 63799870 63799892 -25704661 + AT_rich Low_complexity Low_complexity 1 22 0 3078 166 34 37 chr17 63800821 63801177 -25703376 - L1MB3 LINE L1 0 6183 5828 2193 114 3 0 chr17 63801177 63801485 -25703068 - AluSx SINE Alu -3 309 1 3078 166 34 37 chr17 63801485 63801771 -25702782 - L1MB3 LINE L1 -355 5828 5543 10602 50 1 2 chr17 63801775 63803872 -25700681 - L1PA5 LINE L1 -1 6153 4059 2171 112 48 25 chr17 63854238 63854594 -25649959 + THE1B LTR MaLR 1 364 0 3218 110 6 0 chr17 63854594 63855084 -25649469 + THE1B-int LTR MaLR 1 493 -1087 574 161 0 0 chr17 63855187 63855274 -25649279 + AluSg/x SINE Alu 209 295 -17 188 242 113 81 chr17 63855280 63855342 -25649211 + MER5B DNA MER1_type 101 164 -14 1573 98 5 5 chr17 63855601 63855815 -25648738 - AluSp SINE Alu -99 214 1 583 239 75 26 chr17 63855926 63856201 -25648352 - L1ME3A LINE L1 -46 6116 5819 1223 171 0 32 chr17 63856201 63856417 -25648136 - AluSg/x SINE Alu -3 309 101 1584 12 0 0 chr17 63856585 63856757 -25647796 - AluYa5 SINE Alu -16 295 124 24 0 0 0 chr17 63857056 63857080 -25647473 + AT_rich Low_complexity Low_complexity 1 24 0 2351 70 3 0 chr17 63857523 63857808 -25646745 + AluSq SINE Alu 1 286 -27 423 0 0 0 chr17 63857808 63857855 -25646698 + (CAAAT)n Simple_repeat Simple_repeat 2 48 0 280 186 43 14 chr17 63858766 63858836 -25645717 - L1ME3A LINE L1 -385 5777 5706 2169 87 37 7 chr17 63858840 63859140 -25645413 + AluSg SINE Alu 1 309 -1 838 170 57 0 chr17 63859496 63859637 -25644916 + AluJo SINE Alu 3 151 -161 348 83 0 0 chr17 63859816 63859864 -25644689 + (TG)n Simple_repeat Simple_repeat 2 49 0 830 152 0 0 chr17 63859869 63859994 -25644559 - FRAM SINE Alu -30 146 22 2076 126 0 7 chr17 63860199 63860515 -25644038 + AluSx SINE Alu 1 314 0 2531 77 0 0 chr17 63860645 63860956 -25643597 + AluY SINE Alu 1 311 0 2581 200 67 32 chr17 63860966 63861650 -25642903 - L1MC3 LINE L1 -10 7775 7068 191 268 0 49 chr17 63861799 63861840 -25642713 + L2 LINE L2 3233 3271 -42 328 310 80 0 chr17 63861860 63861973 -25642580 + L2 LINE L2 3190 3311 -2 984 160 0 13 chr17 63862210 63862366 -25642187 - AluSg/x SINE Alu -46 266 113 1645 159 0 8 chr17 63862367 63862618 -25641935 - AluSx SINE Alu -63 249 1 1674 148 96 0 chr17 63863102 63863373 -25641180 - AluJo SINE Alu -15 297 1 2308 78 7 29 chr17 63863766 63864075 -25640478 + AluSq SINE Alu 1 302 -11 226 300 133 38 chr17 63864877 63865224 -25639329 - HAL1b LINE L1 -748 600 221 21 57 0 0 chr17 63865696 63865731 -25638822 + AT_rich Low_complexity Low_complexity 1 35 0 566 230 18 12 chr17 63866357 63866522 -25638031 - Charlie1 DNA MER1_type -219 2542 2377 629 207 0 0 chr17 63866526 63866661 -25637892 - L1MB7 LINE L1 -92 6092 5958 639 175 30 30 chr17 63866663 63866829 -25637724 - Charlie1 DNA MER1_type -411 2350 2185 2684 252 29 19 chr17 63866839 63867610 -25636943 + L1MEc LINE L1 40 817 -5579 427 164 0 0 chr17 63867614 63867681 -25636872 + AluJ/FLAM SINE Alu 2 68 -244 1348 139 32 5 chr17 63867783 63867999 -25636554 + AluJb SINE Alu 91 312 0 453 213 32 11 chr17 63868000 63868094 -25636459 + 7SLRNA srpRNA srpRNA 203 298 -22 3379 236 57 8 chr17 63868107 63868951 -25635602 - L1M2c LINE L1 -5039 1750 866 2152 117 16 7 chr17 63868961 63869268 -25635285 - AluSg SINE Alu 0 310 1 1132 319 127 52 chr17 63869463 63869493 -25635060 + L2 LINE L2 2157 2183 -1130 2107 171 71 15 chr17 63869493 63869902 -25634651 - MSTB1 LTR MaLR 0 432 1 1132 319 127 52 chr17 63869902 63870041 -25634512 + L2 LINE L2 2183 2310 -1003 2285 94 13 3 chr17 63870041 63870339 -25634214 - AluSq SINE Alu -12 301 1 1132 319 127 52 chr17 63870339 63870891 -25633662 + L2 LINE L2 2310 2819 -494 2175 135 0 7 chr17 63870891 63871194 -25633359 + AluSx SINE Alu 1 301 -11 1132 319 127 52 chr17 63871194 63871382 -25633171 + L2 LINE L2 2819 2991 -322 2285 102 3 0 chr17 63871382 63871685 -25632868 + AluSp SINE Alu 6 309 -4 1132 319 127 52 chr17 63871685 63871820 -25632733 + L2 LINE L2 2991 3305 -8 2141 119 13 10 chr17 63872449 63872760 -25631793 + AluSx SINE Alu 1 312 0 21 0 0 0 chr17 63872832 63872853 -25631700 + AT_rich Low_complexity Low_complexity 1 21 0 1742 152 46 0 chr17 63874166 63874429 -25630124 + AluJo SINE Alu 11 285 -27 417 152 0 54 chr17 63874492 63874584 -25629969 - AluJ/FRAM SINE Alu -3 309 223 417 177 0 0 chr17 63874685 63874747 -25629806 - AluS SINE Alu -247 62 1 22 0 0 0 chr17 63874755 63874777 -25629776 + AT_rich Low_complexity Low_complexity 1 22 0 10685 167 83 15 chr17 63874798 63875064 -25629489 - L1MCa LINE L1 -3009 3417 3171 1892 139 0 32 chr17 63875064 63875373 -25629180 + AluY SINE Alu 1 299 -12 10685 167 83 15 chr17 63875373 63876176 -25628377 - L1MCa LINE L1 -3255 3171 2424 2135 121 7 10 chr17 63876176 63876482 -25628071 - AluSg SINE Alu -2 308 4 10685 167 83 15 chr17 63876482 63876540 -25628013 - L1MCa LINE L1 -4002 2424 2371 2180 137 0 0 chr17 63876540 63876846 -25627707 - AluSq SINE Alu -7 306 1 10685 167 83 15 chr17 63876846 63877381 -25627172 - L1MCa LINE L1 -4055 2371 1874 1456 185 56 7 chr17 63877381 63877651 -25626902 - AluJo SINE Alu -29 283 1 10685 167 83 15 chr17 63877651 63878022 -25626531 - L1MCa LINE L1 -4552 1874 1530 1712 113 98 0 chr17 63878022 63878278 -25626275 - AluSq SINE Alu 0 313 33 10685 167 83 15 chr17 63878278 63879439 -25625114 - L1MCa LINE L1 -4896 1530 6 499 250 0 0 chr17 63879785 63879885 -25624668 - L2 LINE L2 0 3313 3214 1433 192 47 71 chr17 63879969 63880439 -25624114 - LTR10B LTR ERV1 0 547 1 891 280 22 13 chr17 63880439 63880664 -25623889 - L2 LINE L2 -255 3058 2832 2417 194 54 44 chr17 63880687 63881416 -25623137 + MER21B LTR ERV1 12 833 -30 248 172 0 0 chr17 63881495 63881553 -25623000 - L1MD3 LINE L1 -5 7990 7933 2152 182 81 75 chr17 63881556 63882226 -25622327 - LTR8 LTR ERV1 -2 689 16 1553 228 28 20 chr17 63882259 63882659 -25621894 - L1MD3 LINE L1 -50 7945 7543 253 187 132 55 chr17 63882659 63882750 -25621803 + MLT1F1 LTR MaLR 34 131 -436 380 127 28 42 chr17 63882750 63882821 -25621732 + L1MD3 LINE L1 7438 7507 -488 209 268 0 0 chr17 63883047 63883088 -25621465 + polypurine Low_complexity Low_complexity 5 45 0 4032 91 9 0 chr17 63883152 63883701 -25620852 - MER41A LTR ERV1 0 554 1 237 282 150 12 chr17 63883936 63884049 -25620504 + MIR SINE MIR 30 154 -63 705 175 0 16 chr17 63884118 63884244 -25620309 - FLAM_A SINE Alu -11 131 8 206 304 114 0 chr17 63884334 63884413 -25620140 + MIR SINE MIR 162 249 -13 1091 154 0 0 chr17 63884585 63884747 -25619806 + AluJb SINE Alu 135 296 -16 438 299 9 9 chr17 63884753 63884860 -25619693 + L3 LINE CR1 1461 1567 -10 2322 103 0 0 chr17 63885039 63885340 -25619213 + AluSx SINE Alu 5 305 -7 2131 98 3 3 chr17 63886652 63886937 -25617616 + AluSx SINE Alu 22 306 -6 258 172 0 69 chr17 63887462 63887520 -25617033 - L2 LINE L2 0 3272 3219 402 172 211 16 chr17 63887557 63887610 -25616943 - L1MD3 LINE L1 -8 7987 7946 2333 105 0 3 chr17 63887610 63887916 -25616637 + AluSp SINE Alu 1 305 -8 402 172 211 16 chr17 63887916 63887990 -25616563 - L1MD3 LINE L1 -49 7946 7835 882 199 60 68 chr17 63887995 63888261 -25616292 - L2 LINE L2 -608 2706 2443 1036 262 76 0 chr17 63888331 63888659 -25615894 + L2 LINE L2 639 991 -2323 2681 238 93 27 chr17 63888678 63889502 -25615051 - L2 LINE L2 -877 2437 1559 747 179 0 0 chr17 63889508 63889656 -25614897 + FLAM_C SINE Alu 1 148 0 871 109 0 8 chr17 63889670 63889789 -25614764 + AluJb SINE Alu 183 300 -12 360 285 52 52 chr17 63889792 63889865 -25614688 - L2 LINE L2 -1753 1561 1489 2487 81 3 0 chr17 63889865 63890172 -25614381 + AluSx SINE Alu 1 308 -4 360 285 52 52 chr17 63890172 63890270 -25614283 - L2 LINE L2 -1824 1490 1390 374 304 61 0 chr17 63890296 63890411 -25614142 - L2 LINE L2 -2037 1277 1156 1683 165 0 4 chr17 63890411 63890660 -25613893 - AluJo SINE Alu -64 248 1 21 0 0 0 chr17 63890724 63890745 -25613808 + AT_rich Low_complexity Low_complexity 1 21 0 1870 93 0 4 chr17 63890793 63891029 -25613524 - AluSc SINE Alu -15 294 60 2015 183 0 0 chr17 63891109 63891421 -25613132 + AluSx SINE Alu 1 312 0 1397 185 20 66 chr17 63891445 63891569 -25612984 + AluJo SINE Alu 9 137 -175 2357 80 13 17 chr17 63891569 63891870 -25612683 + AluSx SINE Alu 1 300 -12 1397 185 20 66 chr17 63891870 63892017 -25612536 + AluJo SINE Alu 137 267 -45 2437 85 0 7 chr17 63892017 63892323 -25612230 - AluSx SINE Alu -8 304 1 1397 185 20 66 chr17 63892323 63892353 -25612200 + AluJo SINE Alu 267 297 -15 335 169 0 13 chr17 63892353 63892430 -25612123 + GA-rich Low_complexity Low_complexity 1 76 0 1031 174 0 0 chr17 63892485 63892640 -25611913 + AluJo SINE Alu 114 268 -44 308 185 0 87 chr17 63892642 63892663 -25611890 - L2 LINE L2 -2760 554 533 6655 84 0 20 chr17 63892663 63893532 -25611021 - L1PA8 LINE L1 0 6172 5307 2358 81 0 0 chr17 63893532 63893828 -25610725 - AluY SINE Alu 0 311 16 6655 84 0 20 chr17 63893828 63893930 -25610623 - L1PA8 LINE L1 -865 5307 5205 308 185 0 87 chr17 63893930 63894000 -25610553 - L2 LINE L2 -2781 533 471 229 273 0 0 chr17 63894024 63894079 -25610474 - L1M1 LINE L1 -733 5567 5513 2123 106 31 10 chr17 63894162 63894455 -25610098 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr17 63894546 63894571 -25609982 + AT_rich Low_complexity Low_complexity 1 25 0 183 80 0 0 chr17 63894599 63894624 -25609929 + (TG)n Simple_repeat Simple_repeat 2 26 0 2311 75 3 16 chr17 63895226 63895533 -25609020 - AluY SINE Alu -8 303 1 1564 162 9 81 chr17 63895731 63895880 -25608673 + AluJo SINE Alu 1 116 -196 2214 103 0 10 chr17 63895880 63896180 -25608373 + AluSx SINE Alu 1 297 -15 1564 162 9 81 chr17 63896180 63896351 -25608202 + AluJo SINE Alu 116 298 -14 23 33 0 0 chr17 63896462 63896492 -25608061 + AT_rich Low_complexity Low_complexity 1 30 0 2692 215 29 21 chr17 63896534 63896806 -25607747 + L1ME2 LINE L1 5424 5692 -472 2566 53 0 3 chr17 63896806 63897107 -25607446 - AluSq SINE Alu -13 300 1 2692 215 29 21 chr17 63897107 63897554 -25606999 + L1ME2 LINE L1 5692 6149 -15 285 143 0 0 chr17 63898132 63898174 -25606379 + 5S rRNA rRNA 1 42 -79 1971 141 0 46 chr17 63898217 63898356 -25606197 + AluJb SINE Alu 1 145 -167 435 68 0 0 chr17 63898356 63898415 -25606138 + (CA)n Simple_repeat Simple_repeat 2 60 0 1971 141 0 46 chr17 63898415 63898602 -25605951 + AluJb SINE Alu 145 312 0 1100 96 0 0 chr17 63899037 63899173 -25605380 + AluSq/x SINE Alu 1 136 -176 453 202 0 0 chr17 63899190 63899211 -25605342 + GA-rich Low_complexity Low_complexity 3 23 -78 2328 83 3 0 chr17 63899211 63899500 -25605053 + AluSp SINE Alu 1 290 -23 453 202 0 0 chr17 63899500 63899577 -25604976 + GA-rich Low_complexity Low_complexity 22 101 0 674 284 53 32 chr17 63899588 63899930 -25604623 + HAL1b LINE L1 245 593 -755 241 273 115 44 chr17 63899963 63900100 -25604453 + HAL1b LINE L1 667 822 -526 760 184 0 29 chr17 63900100 63900236 -25604317 + FLAM_C SINE Alu 1 132 -1 241 273 115 44 chr17 63900236 63900281 -25604272 + HAL1b LINE L1 822 862 -486 2338 98 0 0 chr17 63900293 63900588 -25603965 + AluSx SINE Alu 1 295 -17 318 263 188 23 chr17 63900597 63900650 -25603903 + HAL1 LINE L1 1699 1742 -765 189 0 0 0 chr17 63900650 63900671 -25603882 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 318 263 188 23 chr17 63900671 63900750 -25603803 + HAL1 LINE L1 1742 1853 -654 227 267 0 22 chr17 63900835 63900925 -25603628 + HAL1 LINE L1 1978 2065 -442 1563 149 40 112 chr17 63900927 63901302 -25603251 + Tigger3(Golem) DNA MER2_type 1 3028 -1 334 219 248 48 chr17 63901303 63901513 -25603040 + HAL1 LINE L1 2066 2317 -190 585 238 65 60 chr17 63901528 63901620 -25602933 + HAL1 LINE L1 2259 2349 -158 2242 113 7 0 chr17 63901620 63901920 -25602633 + AluSq SINE Alu 1 302 -11 2055 116 27 3 chr17 63901920 63902214 -25602339 + AluSg SINE Alu 1 301 -9 585 238 65 60 chr17 63902214 63902368 -25602185 + HAL1 LINE L1 2348 2507 0 375 186 264 7 chr17 63902609 63902749 -25601804 - L2 LINE L2 -1 3312 3137 2398 89 3 0 chr17 63902750 63903053 -25601500 + AluSx SINE Alu 1 304 -8 2341 87 7 0 chr17 63903076 63903374 -25601179 + AluSq SINE Alu 1 300 -13 2217 87 0 63 chr17 63903376 63903708 -25600845 + AluY SINE Alu 1 311 0 1105 148 11 0 chr17 63903708 63903884 -25600669 + AluSg/x SINE Alu 133 310 -2 2479 66 0 10 chr17 63904731 63905032 -25599521 + AluSq SINE Alu 1 298 -15 916 111 15 30 chr17 63906201 63906336 -25598217 + AluJo SINE Alu 1 133 -169 198 0 0 0 chr17 63906387 63906409 -25598144 + (A)n Simple_repeat Simple_repeat 1 22 0 459 286 88 47 chr17 63907118 63907460 -25597093 + L1ME4a LINE L1 5572 5927 -194 210 71 0 0 chr17 63907460 63907488 -25597065 + (TA)n Simple_repeat Simple_repeat 1 28 0 201 74 0 0 chr17 63907488 63907515 -25597038 + (GA)n Simple_repeat Simple_repeat 1 27 0 2450 78 0 13 chr17 63907758 63908067 -25596486 - AluSc SINE Alu -4 305 1 1005 205 0 0 chr17 63908244 63908410 -25596143 + AluJo SINE Alu 137 302 0 26 30 0 0 chr17 63910395 63910428 -25594125 + AT_rich Low_complexity Low_complexity 1 33 0 198 0 0 0 chr17 63910930 63910952 -25593601 + (TTG)n Simple_repeat Simple_repeat 2 23 0 280 242 69 79 chr17 63911752 63911868 -25592685 + MIR SINE MIR 31 153 -70 203 277 0 0 chr17 63911903 63911950 -25592603 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 2531 68 0 0 chr17 63912321 63912616 -25591937 - AluSx SINE Alu -17 295 1 2192 104 7 3 chr17 63913102 63913399 -25591154 + AluSg SINE Alu 2 299 -11 1696 145 26 43 chr17 63913497 63913635 -25590918 + AluJo SINE Alu 1 140 -172 2379 97 0 0 chr17 63913635 63913943 -25590610 + AluY SINE Alu 1 308 -3 1696 145 26 43 chr17 63913943 63914108 -25590445 + AluJo SINE Alu 140 299 -13 610 162 0 36 chr17 63915347 63915458 -25589095 + FLAM_C SINE Alu 31 137 -6 276 290 182 11 chr17 63915471 63915740 -25588813 - L2 LINE L2 -221 3051 2739 248 276 56 84 chr17 63915949 63916163 -25588390 - L2 LINE L2 -1511 1803 1596 34 24 0 0 chr17 63916945 63916986 -25587567 + AT_rich Low_complexity Low_complexity 1 41 0 2263 114 7 0 chr17 63917125 63917423 -25587130 + AluSg SINE Alu 1 300 -10 1978 105 11 7 chr17 63917715 63917991 -25586562 - AluSx SINE Alu -22 290 14 367 308 19 0 chr17 63918123 63918230 -25586323 - MIR SINE MIR -149 113 5 1952 120 0 0 chr17 63918391 63918658 -25585895 + AluSx SINE Alu 1 267 -45 189 0 0 0 chr17 63918658 63918679 -25585874 + (TAAAAA)n Simple_repeat Simple_repeat 4 24 0 210 228 174 22 chr17 63918952 63919044 -25585509 + L2 LINE L2 2924 3029 -243 236 267 311 37 chr17 63919273 63919408 -25585145 + MIR3 SINE MIR 21 192 -16 22 0 0 0 chr17 63921645 63921667 -25582886 + AT_rich Low_complexity Low_complexity 1 22 0 1811 133 0 15 chr17 63926161 63926431 -25578122 - AluSx SINE Alu -13 299 34 2071 118 13 7 chr17 63926466 63926772 -25577781 - AluSx SINE Alu -4 308 1 482 299 120 19 chr17 63927865 63928240 -25576313 + L1MCc LINE L1 10 422 -6001 1320 247 93 51 chr17 63928499 63928834 -25575719 + L1MCc LINE L1 821 1140 -5731 364 203 40 0 chr17 63928834 63928908 -25575645 + MADE1 DNA Mariner 1 77 -3 1320 247 93 51 chr17 63928908 63929153 -25575400 + L1MCc LINE L1 1140 1373 -5498 2043 95 8 0 chr17 63929153 63929417 -25575136 + AluSx SINE Alu 38 303 -9 1320 247 93 51 chr17 63929417 63929866 -25574687 + L1MCc LINE L1 1373 1801 -5070 1889 146 26 3 chr17 63929866 63930168 -25574385 + AluJo SINE Alu 1 309 -3 1991 161 0 0 chr17 63930168 63930466 -25574087 + AluSx SINE Alu 1 298 -14 2436 100 0 0 chr17 63930470 63930779 -25573774 + AluSg SINE Alu 1 309 -1 1320 247 93 51 chr17 63930779 63930845 -25573708 + L1MCc LINE L1 1803 1984 -4887 2297 104 7 7 chr17 63930852 63931160 -25573393 + AluSq SINE Alu 1 308 -5 588 188 140 105 chr17 63931167 63931213 -25573340 + L1M4 LINE L1 3525 3568 -2578 1824 102 0 0 chr17 63931213 63931449 -25573104 + AluSq SINE Alu 1 236 -77 588 188 140 105 chr17 63931449 63931631 -25572922 + L1M4 LINE L1 3568 3761 -2385 255 89 89 0 chr17 63931616 63931661 -25572892 + L1MC4 LINE L1 5425 5473 -2569 * 486 222 131 20 chr17 63931701 63931854 -25572699 + L1MC4 LINE L1 5458 5627 -539 787 293 120 64 chr17 63931859 63932206 -25572347 - MER21B LTR ERV1 -159 704 378 567 103 0 0 chr17 63932206 63932303 -25572250 + (TA)n Simple_repeat Simple_repeat 1 97 0 787 293 120 64 chr17 63932303 63932349 -25572204 - MER21B LTR ERV1 -485 378 336 2240 98 3 0 chr17 63932349 63932634 -25571919 - AluSp SINE Alu -26 287 2 787 293 120 64 chr17 63932634 63932891 -25571662 - MER21B LTR ERV1 -527 336 17 1715 242 166 61 chr17 63932903 63932928 -25571625 + L1MC4 LINE L1 5621 5642 -2400 2448 116 81 0 chr17 63932928 63933263 -25571290 + THE1B LTR MaLR 3 364 0 1715 242 166 61 chr17 63933263 63933540 -25571013 + L1MC4 LINE L1 5642 5888 -2154 210 37 0 0 chr17 63933540 63933567 -25570986 + (CAGAT)n Simple_repeat Simple_repeat 2 28 0 1715 242 166 61 chr17 63933567 63934215 -25570338 + L1MC4 LINE L1 5888 6672 -1370 524 212 18 9 chr17 63934230 63934396 -25570157 - MER2 DNA MER2_type 0 345 122 843 169 42 0 chr17 63934398 63934540 -25570013 + FRAM SINE Alu 3 150 -26 909 178 0 0 chr17 63934548 63934683 -25569870 - MER2 DNA MER2_type -210 135 1 2493 77 3 3 chr17 63934693 63935004 -25569549 - AluSp SINE Alu -2 311 1 1065 170 0 0 chr17 63935009 63935174 -25569379 - AluJb SINE Alu -17 295 131 2191 212 82 67 chr17 63935174 63935703 -25568850 + L1MC4a LINE L1 6615 7159 -649 1341 178 110 8 chr17 63935703 63935967 -25568586 + AluJb SINE Alu 1 291 -21 2191 212 82 67 chr17 63935967 63936141 -25568412 + L1MC4a LINE L1 7159 7329 -479 2219 101 10 0 chr17 63936146 63936444 -25568109 + AluSx SINE Alu 1 301 -11 1368 161 81 15 chr17 63936477 63936737 -25567816 + AluJb SINE Alu 21 297 -15 264 149 0 0 chr17 63936746 63936793 -25567760 + (TG)n Simple_repeat Simple_repeat 2 48 0 2039 223 62 4 chr17 63936801 63937267 -25567286 + L1MD3 LINE L1 7493 7985 -10 34 0 0 0 chr17 63939418 63939452 -25565101 + AT_rich Low_complexity Low_complexity 1 34 0 338 265 102 41 chr17 63940117 63940264 -25564289 + L1MC4a LINE L1 5755 5910 -1898 2145 131 0 3 chr17 63940276 63940573 -25563980 + AluSx SINE Alu 6 301 -11 544 203 52 120 chr17 63940782 63940866 -25563687 - MER58C DNA MER1_type -2205 215 127 2358 86 0 22 chr17 63940866 63941179 -25563374 + AluSg SINE Alu 1 306 -4 544 203 52 120 chr17 63941179 63941286 -25563267 - MER58C DNA MER1_type -2293 127 37 236 206 0 22 chr17 63941409 63941501 -25563052 + GA-rich Low_complexity Low_complexity 2 91 0 1576 175 20 30 chr17 63942187 63942490 -25562063 - AluJo SINE Alu -12 300 1 528 265 160 72 chr17 63942534 63942841 -25561712 + L1MEd LINE L1 12 291 -5828 1676 163 45 10 chr17 63942841 63943130 -25561423 - AluJb SINE Alu -13 299 1 528 265 160 72 chr17 63943130 63943392 -25561161 + L1MEd LINE L1 291 631 -5488 364 218 148 74 chr17 63943551 63943753 -25560800 + L1MEd LINE L1 598 814 -5318 1453 155 3 89 chr17 63943757 63944061 -25560492 + AluJo SINE Alu 1 278 -34 1561 237 91 21 chr17 63944209 63944791 -25559762 + L1MEd LINE L1 2902 3524 -2605 2698 210 143 12 chr17 63945106 63945250 -25559303 + MER99 DNA DNA 2 126 -702 2058 127 3 7 chr17 63945250 63945541 -25559012 - AluSg SINE Alu -20 290 1 2698 210 143 12 chr17 63945541 63946126 -25558427 + MER99 DNA DNA 126 826 -2 265 189 135 27 chr17 63946207 63946281 -25558272 - HsTC2 DNA Tc2 -1799 99 18 238 178 0 0 chr17 63946454 63946499 -25558054 + MLT1L LTR MaLR 38 82 -533 2118 115 0 7 chr17 63946563 63946877 -25557676 + AluSx SINE Alu 1 312 0 450 274 126 86 chr17 63946903 63947117 -25557436 + MLT1L LTR MaLR 220 457 -158 448 91 23 0 chr17 63947117 63947205 -25557348 + (CA)n Simple_repeat Simple_repeat 2 91 0 450 274 126 86 chr17 63947205 63947363 -25557190 + MLT1L LTR MaLR 457 607 -8 812 160 23 0 chr17 63948576 63948707 -25555846 + AluJo SINE Alu 1 134 -178 538 251 25 108 chr17 63949006 63949075 -25555478 + MIR SINE MIR 7 80 -182 2291 112 0 6 chr17 63949075 63949387 -25555166 - AluSx SINE Alu -2 310 1 2486 93 0 0 chr17 63949393 63949704 -25554849 - AluSq SINE Alu -2 311 1 538 251 25 108 chr17 63949704 63949870 -25554683 + MIR SINE MIR 85 235 -27 1115 225 19 5 chr17 63950143 63950356 -25554197 + MER20 DNA MER1_type 4 219 0 2091 124 3 0 chr17 63950467 63950749 -25553804 - AluSx SINE Alu -27 285 3 2131 123 3 3 chr17 63950847 63951157 -25553396 + AluSg SINE Alu 1 310 0 352 75 0 30 chr17 63952165 63952232 -25552321 + (CCA)n Simple_repeat Simple_repeat 1 65 0 2247 99 7 0 chr17 63952556 63952848 -25551705 + AluSx SINE Alu 3 296 -16 523 175 93 0 chr17 63952882 63952979 -25551574 + L1MD2 LINE L1 6181 6286 -73 855 146 70 0 chr17 63952889 63953047 -25551506 + L1MD2 LINE L1 6189 6357 -2 2041 111 7 17 chr17 63953117 63953405 -25551148 - AluSx SINE Alu -27 285 1 32 0 0 0 chr17 63953636 63953668 -25550885 + AT_rich Low_complexity Low_complexity 1 32 0 754 162 0 0 chr17 63953669 63953786 -25550767 - FLAM_C SINE Alu -16 117 1 1502 81 0 52 chr17 63954838 63955048 -25549505 + AluY SINE Alu 96 294 -17 2236 98 7 13 chr17 63955114 63955421 -25549132 + AluSx SINE Alu 1 305 -7 1136 135 19 0 chr17 63955778 63955934 -25548619 + AluSg/x SINE Alu 124 282 -30 216 0 0 0 chr17 63955937 63955961 -25548592 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2229 115 0 7 chr17 63956070 63956374 -25548179 + AluSq SINE Alu 1 302 -11 1447 210 3 64 chr17 63956440 63956769 -25547784 + AluJo SINE Alu 1 309 -3 1777 134 50 14 chr17 63956850 63957133 -25547420 + AluJo SINE Alu 1 293 -19 2173 117 0 3 chr17 63957584 63957884 -25546669 - AluSq SINE Alu -14 299 1 439 163 38 0 chr17 63958199 63958279 -25546274 + MSTB2 LTR MaLR 316 398 -59 209 128 21 0 chr17 63958291 63958338 -25546215 + A-rich Low_complexity Low_complexity 1 48 0 1945 207 81 27 chr17 63958351 63958944 -25545609 + L1MB7 LINE L1 4271 4895 -1251 2434 180 74 25 chr17 63958944 63959386 -25545167 + L1MB7 LINE L1 5476 5954 -230 2188 113 3 13 chr17 63959386 63959695 -25544858 + AluY SINE Alu 1 306 -5 2434 180 74 25 chr17 63959695 63959818 -25544735 + L1MB7 LINE L1 5954 6069 -115 2418 100 0 0 chr17 63959909 63960219 -25544334 + AluSx SINE Alu 3 312 0 616 305 75 16 chr17 63960223 63960528 -25544025 + L1MC/D LINE L1 3128 3450 -2696 6603 88 29 8 chr17 63960540 63961068 -25543485 + L1MA3 LINE L1 5238 5753 -552 2060 136 0 10 chr17 63961068 63961370 -25543183 + AluSx SINE Alu 1 299 -13 6603 88 29 8 chr17 63961370 63961879 -25542674 + L1MA3 LINE L1 5753 6305 0 327 317 29 25 chr17 63962132 63962372 -25542181 + L1MC/D LINE L1 3698 3938 -2208 569 254 83 48 chr17 63962419 63962671 -25541882 + MIR SINE MIR 2 262 0 306 253 22 22 chr17 63962726 63962817 -25541736 + L1MC/D LINE L1 5357 5447 -897 368 202 0 45 chr17 63962882 63962971 -25541582 - MER8 DNA MER2_type 0 239 155 1902 134 11 7 chr17 63963030 63963336 -25541217 - AluSx SINE Alu 0 307 1 2048 98 25 7 chr17 63963354 63963640 -25540913 + AluY SINE Alu 18 308 -3 2368 101 0 0 chr17 63963890 63964198 -25540355 + AluSq SINE Alu 1 308 -5 318 291 32 39 chr17 63964212 63964494 -25540059 + L1M4 LINE L1 4297 4576 -1570 1197 186 53 46 chr17 63964520 63964783 -25539770 - AluJo SINE Alu -46 266 2 245 222 42 0 chr17 63964976 63965048 -25539505 - MER116 DNA Mariner -3 77 3 241 250 0 20 chr17 63965321 63965421 -25539132 + (TTA)n Simple_repeat Simple_repeat 1 98 0 1297 160 25 17 chr17 63965489 63965726 -25538827 + MER8 DNA MER2_type 1 239 0 231 276 11 0 chr17 63965834 63965921 -25538632 - L1M LINE L1 -2407 5401 5314 1855 198 26 12 chr17 63966050 63966554 -25537999 + L1M4 LINE L1 4815 5325 -821 1409 280 91 104 chr17 63966621 63967389 -25537164 + L2 LINE L2 1717 2520 -793 281 161 113 0 chr17 63967389 63967451 -25537102 + MER105 DNA DNA 70 138 -66 1409 280 91 104 chr17 63967451 63968164 -25536389 + L2 LINE L2 2520 3241 -72 768 188 0 0 chr17 63969104 63969232 -25535321 + FLAM_C SINE Alu 1 128 -5 854 102 8 23 chr17 63969573 63969701 -25534852 + AluJb SINE Alu 1 126 -186 327 113 0 0 chr17 63969707 63969760 -25534793 + Alu SINE Alu 245 297 -4 2204 89 17 3 chr17 63970074 63970365 -25534188 - AluSq SINE Alu -18 295 1 266 291 8 17 chr17 63970590 63970707 -25533846 - L1ME LINE L1 -263 5858 5743 358 373 65 13 chr17 63970727 63970880 -25533673 - L1ME LINE L1 -2154 5654 5494 2902 9 0 0 chr17 63972202 63972519 -25532034 + AluYb8 SINE Alu 1 317 -1 188 354 159 9 chr17 63972926 63973039 -25531514 + L2 LINE L2 3134 3263 -9 1736 112 69 4 chr17 63973395 63973672 -25530881 - AluSc SINE Alu -14 295 1 2063 106 42 3 chr17 63973794 63974078 -25530475 + AluSx SINE Alu 1 295 -17 32 26 0 0 chr17 63975041 63975080 -25529473 + AT_rich Low_complexity Low_complexity 1 39 0 330 109 0 0 chr17 63975112 63975158 -25529395 - Alu SINE Alu -256 46 1 2454 80 3 0 chr17 63975303 63975604 -25528949 + AluSq SINE Alu 1 302 -11 2399 64 0 0 chr17 63975605 63975887 -25528666 + AluY SINE Alu 14 295 -16 400 94 0 0 chr17 63975888 63975941 -25528612 - Alu SINE Alu -260 53 1 22 56 0 0 chr17 63975941 63975977 -25528576 + AT_rich Low_complexity Low_complexity 1 36 0 292 229 45 102 chr17 63975995 63976152 -25528401 - L2 LINE L2 -1 3312 3165 649 302 58 32 chr17 63976373 63976681 -25527872 - MLT1K LTR MaLR -119 469 154 2179 105 34 0 chr17 63976768 63977062 -25527491 + AluSx SINE Alu 1 304 -8 596 316 71 40 chr17 63977085 63977535 -25527018 + L1M4 LINE L1 4395 4858 -1288 279 262 60 12 chr17 63977551 63977635 -25526918 - L2 LINE L2 0 3272 3185 193 298 0 18 chr17 63977645 63977702 -25526851 + MIR SINE MIR 2 57 -205 929 158 31 90 chr17 63977935 63978089 -25526464 + MER3 DNA MER1_type 1 162 -47 1029 146 0 24 chr17 63978089 63978254 -25526299 - FAM SINE Alu -11 164 4 929 158 31 90 chr17 63978254 63978277 -25526276 + MER3 DNA MER1_type 162 185 -24 2500 79 3 0 chr17 63978277 63978580 -25525973 + AluSp SINE Alu 1 304 -9 929 158 31 90 chr17 63978580 63978623 -25525930 + MER3 DNA MER1_type 185 209 0 1734 180 0 36 chr17 63979072 63979378 -25525175 + AluJo SINE Alu 1 295 -17 2368 86 0 7 chr17 63979378 63979679 -25524874 + AluSq SINE Alu 1 300 -13 2209 87 0 63 chr17 63979681 63980013 -25524540 + AluY SINE Alu 1 311 0 1112 148 11 0 chr17 63980013 63980189 -25524364 + AluSg/x SINE Alu 131 308 -2 2471 66 0 10 chr17 63981036 63981337 -25523216 + AluSq SINE Alu 1 298 -15 751 169 0 29 chr17 63982506 63982642 -25521911 + AluJo SINE Alu 1 132 -170 189 0 0 0 chr17 63982693 63982714 -25521839 + (A)n Simple_repeat Simple_repeat 1 21 0 332 298 85 44 chr17 63983423 63983765 -25520788 + L1ME4a LINE L1 5572 5927 -194 210 71 0 0 chr17 63983765 63983793 -25520760 + (TA)n Simple_repeat Simple_repeat 1 28 0 219 69 0 0 chr17 63983793 63983822 -25520731 + (GA)n Simple_repeat Simple_repeat 1 29 0 2447 78 0 13 chr17 63984065 63984374 -25520179 - AluSc SINE Alu -4 305 1 941 205 0 0 chr17 63984551 63984717 -25519836 + AluJo SINE Alu 137 302 0 26 30 0 0 chr17 63986702 63986735 -25517818 + AT_rich Low_complexity Low_complexity 1 33 0 198 0 0 0 chr17 63987237 63987259 -25517294 + (TTG)n Simple_repeat Simple_repeat 2 23 0 285 242 69 79 chr17 63988059 63988175 -25516378 + MIR SINE MIR 31 153 -70 203 277 0 0 chr17 63988210 63988257 -25516296 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 2522 68 0 0 chr17 63988628 63988923 -25515630 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 63989125 63989155 -25515398 + AT_rich Low_complexity Low_complexity 1 30 0 2692 215 29 21 chr17 63989197 63989469 -25515084 + L1ME2 LINE L1 5424 5692 -472 2566 53 0 3 chr17 63989469 63989770 -25514783 - AluSq SINE Alu -13 300 1 2692 215 29 21 chr17 63989770 63990217 -25514336 + L1ME2 LINE L1 5692 6149 -15 285 143 0 0 chr17 63990795 63990837 -25513716 + 5S rRNA rRNA 1 42 -79 1971 141 0 46 chr17 63990880 63991019 -25513534 + AluJb SINE Alu 1 145 -167 435 68 0 0 chr17 63991019 63991078 -25513475 + (CA)n Simple_repeat Simple_repeat 2 60 0 1971 141 0 46 chr17 63991078 63991265 -25513288 + AluJb SINE Alu 145 312 0 1100 96 0 0 chr17 63991700 63991836 -25512717 + AluSq/x SINE Alu 1 136 -176 453 202 0 0 chr17 63991853 63991874 -25512679 + GA-rich Low_complexity Low_complexity 3 23 -78 2328 83 3 0 chr17 63991874 63992163 -25512390 + AluSp SINE Alu 1 290 -23 453 202 0 0 chr17 63992163 63992240 -25512313 + GA-rich Low_complexity Low_complexity 22 101 0 674 284 53 32 chr17 63992251 63992593 -25511960 + HAL1b LINE L1 245 593 -755 241 273 115 44 chr17 63992626 63992763 -25511790 + HAL1b LINE L1 667 822 -526 760 184 0 29 chr17 63992763 63992899 -25511654 + FLAM_C SINE Alu 1 132 -1 241 273 115 44 chr17 63992899 63992944 -25511609 + HAL1b LINE L1 822 862 -486 2338 98 0 0 chr17 63992956 63993251 -25511302 + AluSx SINE Alu 1 295 -17 318 263 188 23 chr17 63993260 63993313 -25511240 + HAL1 LINE L1 1699 1742 -765 189 0 0 0 chr17 63993313 63993334 -25511219 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 318 263 188 23 chr17 63993334 63993413 -25511140 + HAL1 LINE L1 1742 1853 -654 227 267 0 22 chr17 63993498 63993588 -25510965 + HAL1 LINE L1 1978 2065 -442 1563 149 40 112 chr17 63993590 63993965 -25510588 + Tigger3(Golem) DNA MER2_type 1 3028 -1 334 219 248 48 chr17 63993966 63994176 -25510377 + HAL1 LINE L1 2066 2317 -190 486 238 65 60 chr17 63994191 63994283 -25510270 + HAL1 LINE L1 2259 2349 -158 2242 113 7 0 chr17 63994283 63994583 -25509970 + AluSq SINE Alu 1 302 -11 2059 116 27 3 chr17 63994583 63994877 -25509676 + AluSg SINE Alu 1 301 -9 486 238 65 60 chr17 63994877 63995031 -25509522 + HAL1 LINE L1 2348 2507 0 378 186 264 7 chr17 63995272 63995412 -25509141 - L2 LINE L2 -1 3312 3137 2394 89 3 0 chr17 63995413 63995716 -25508837 + AluSx SINE Alu 1 304 -8 2332 82 3 0 chr17 63995739 63996031 -25508522 + AluSg SINE Alu 1 293 -17 639 233 92 33 chr17 63996097 63996337 -25508216 - L2 LINE L2 -1198 2116 1863 1607 37 0 0 chr17 63996591 63996779 -25507774 - L1PA3 LINE L1 -3 6152 5965 2192 86 40 16 chr17 63997782 63998085 -25506468 + AluSg SINE Alu 1 310 0 418 278 146 0 chr17 63998369 63998520 -25506033 - MIR3 SINE MIR 0 208 36 2302 92 16 3 chr17 63998965 63999268 -25505285 - AluSq SINE Alu -6 307 1 26 30 0 0 chr17 63999845 63999878 -25504675 + AT_rich Low_complexity Low_complexity 1 33 0 2012 133 7 26 chr17 64000882 64001191 -25503362 - AluSx SINE Alu -9 303 1 2496 81 0 0 chr17 64001594 64001892 -25502661 + AluSc SINE Alu 2 299 -10 2473 73 0 0 chr17 64001903 64002204 -25502349 + AluSq SINE Alu 1 301 -12 366 206 14 0 chr17 64002204 64002277 -25502276 + MER112 DNA MER1_type 183 256 -4 1770 164 10 10 chr17 64002284 64002582 -25501971 + AluJo SINE Alu 1 298 -14 22 35 0 0 chr17 64002590 64002619 -25501934 + AT_rich Low_complexity Low_complexity 1 29 0 300 309 74 19 chr17 64002660 64002822 -25501731 + L2 LINE L2 775 945 -2369 1346 25 6 0 chr17 64002859 64003017 -25501536 + L1PA3 LINE L1 5996 6154 -1 985 170 19 0 chr17 64003059 64003218 -25501335 + FRAM SINE Alu 1 162 -14 610 171 0 0 chr17 64003300 64003388 -25501165 + AluSg/x SINE Alu 205 292 -18 223 186 0 17 chr17 64003469 64003528 -25501025 + A-rich Low_complexity Low_complexity 3 60 0 954 177 22 17 chr17 64003787 64003968 -25500585 + MER5A DNA MER1_type 2 183 -6 630 140 44 9 chr17 64003998 64004112 -25500441 + L2 LINE L2 3185 3302 -11 228 256 22 22 chr17 64004238 64004328 -25500225 + L2 LINE L2 1690 1779 -1535 362 162 0 0 chr17 64004408 64004482 -25500071 - L1MB8 LINE L1 0 6178 6105 430 95 0 0 chr17 64004482 64004545 -25500008 + HY3 scRNA scRNA 39 101 0 3610 149 48 50 chr17 64004550 64005282 -25499271 - L1MB8 LINE L1 -54 6124 5395 2277 100 7 0 chr17 64005323 64005622 -25498931 - AluSx SINE Alu -11 301 1 2572 247 60 31 chr17 64005626 64006391 -25498162 - MER21B LTR ERV1 -58 805 19 378 227 11 23 chr17 64006410 64006498 -25498055 - MER21B LTR ERV1 -776 87 1 2168 147 87 36 chr17 64006498 64006641 -25497912 - L1MB8 LINE L1 -744 5402 5268 1301 198 57 7 chr17 64006641 64006924 -25497629 - AluJo SINE Alu -14 298 2 2168 147 87 36 chr17 64006924 64007251 -25497302 - L1MB8 LINE L1 -878 5268 4908 561 153 198 0 chr17 64007272 64007411 -25497142 - FLAM_C SINE Alu 0 161 1 2132 139 7 0 chr17 64007411 64007713 -25496840 - AluSx SINE Alu -8 304 1 281 305 219 0 chr17 64007725 64007876 -25496677 + L2 LINE L2 1939 2122 -1192 1403 248 91 77 chr17 64007878 64008463 -25496090 - MLT1G1 LTR MaLR -2 593 1 343 207 41 91 chr17 64008469 64008590 -25495963 - MLT1G1-int LTR MaLR -8 1363 1249 662 196 111 5 chr17 64008658 64008847 -25495706 + Charlie2 DNA MER1_type 2256 2464 -398 3830 186 23 34 chr17 64008847 64010256 -25494297 - L1 LINE L1 -3155 3693 2307 2197 113 7 3 chr17 64010256 64010548 -25494005 + AluSq SINE Alu 1 293 -20 3830 186 23 34 chr17 64010548 64010721 -25493832 - L1 LINE L1 -4541 2307 2134 2481 182 14 23 chr17 64010833 64011279 -25493274 + MER49 LTR ERV1 408 850 -73 2343 85 3 0 chr17 64011279 64011573 -25492980 - AluY SINE Alu -16 295 1 2481 182 14 23 chr17 64011573 64011638 -25492915 + MER49 LTR ERV1 850 914 -9 200 382 42 28 chr17 64011668 64011812 -25492741 - L2 LINE L2 -457 2857 2712 1814 147 3 29 chr17 64011817 64012124 -25492429 - AluJb SINE Alu -3 309 11 201 340 142 55 chr17 64012131 64012384 -25492169 - L2 LINE L2 -581 2733 2459 2812 13 0 0 chr17 64012693 64012997 -25491556 + AluYb8 SINE Alu 1 304 -14 181 269 19 39 chr17 64013193 64013245 -25491308 + MIR SINE MIR 41 91 -117 210 247 305 19 chr17 64013417 64013571 -25490982 + MIR SINE MIR 65 262 0 2511 61 3 0 chr17 64014023 64014319 -25490234 + AluY SINE Alu 1 297 -14 23 0 0 0 chr17 64014355 64014378 -25490175 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr17 64014378 64014404 -25490149 + (TA)n Simple_repeat Simple_repeat 2 27 0 2124 109 0 0 chr17 64014409 64014693 -25489860 + AluSx SINE Alu 1 284 -28 216 86 0 0 chr17 64014695 64014730 -25489823 + (GGAAA)n Simple_repeat Simple_repeat 5 39 0 2083 284 90 11 chr17 64015179 64015813 -25488740 + L1M4b LINE L1 21 704 -6155 1919 152 26 26 chr17 64015870 64015943 -25488610 - MER2 DNA MER2_type -1 343 271 1776 148 0 49 chr17 64015943 64016248 -25488305 + AluJo SINE Alu 3 292 -20 1919 152 26 26 chr17 64016248 64016262 -25488291 - MER2 DNA MER2_type -73 271 258 1789 124 0 4 chr17 64016262 64016519 -25488034 + AluSq SINE Alu 56 311 -2 1919 152 26 26 chr17 64016519 64016773 -25487780 - MER2 DNA MER2_type -85 259 1 859 211 25 0 chr17 64016811 64016972 -25487581 + FRAM SINE Alu 1 161 -15 2377 91 0 10 chr17 64016974 64017282 -25487271 + AluY SINE Alu 2 306 -5 2303 106 0 3 chr17 64017286 64017597 -25486956 + AluSg SINE Alu 1 310 0 385 154 0 15 chr17 64017597 64017662 -25486891 + L1M4 LINE L1 3782 3845 -2301 2195 116 0 3 chr17 64017662 64017956 -25486597 + AluSx SINE Alu 2 294 -18 1873 201 56 2 chr17 64017985 64018398 -25486155 + L1MC4 LINE L1 7080 7514 -528 284 340 84 30 chr17 64019057 64019354 -25485199 + L2 LINE L2 1147 1459 -1855 2373 99 0 0 chr17 64019716 64020018 -25484535 - AluSx SINE Alu -10 302 1 1780 154 3 17 chr17 64020619 64020918 -25483635 - AluJo SINE Alu -16 296 2 21 0 0 0 chr17 64020955 64020976 -25483577 + AT_rich Low_complexity Low_complexity 1 21 0 717 184 173 22 chr17 64021404 64021532 -25483021 + MER3 DNA MER1_type 4 111 -98 1289 200 88 11 chr17 64021532 64021817 -25482736 + AluJb SINE Alu 1 307 -5 2487 67 0 10 chr17 64021819 64022133 -25482420 + AluY SINE Alu 1 311 0 717 184 173 22 chr17 64022133 64022180 -25482373 + MER3 DNA MER1_type 111 209 0 2116 84 44 14 chr17 64022670 64022966 -25481587 + AluY SINE Alu 1 305 -6 1565 120 0 17 chr17 64022966 64023200 -25481353 + L1PA13 LINE L1 5933 6162 -1 664 201 15 30 chr17 64023463 64023597 -25480956 - FLAM_A SINE Alu -1 132 1 2502 30 47 3 chr17 64023704 64024002 -25480551 + AluY SINE Alu 1 311 0 1936 128 28 0 chr17 64024474 64024764 -25479789 - AluSq SINE Alu -15 298 1 2031 143 3 3 chr17 64024779 64025080 -25479473 - AluSx SINE Alu -11 301 1 2771 77 3 14 chr17 64025444 64025807 -25478746 + L1PA14 LINE L1 5803 6161 0 1863 163 0 20 chr17 64025832 64026133 -25478420 + AluJb SINE Alu 1 295 -17 618 206 9 0 chr17 64026198 64026346 -25478207 + L1MB3 LINE L1 5126 5282 -864 1841 111 0 4 chr17 64026346 64026589 -25477964 + AluSx SINE Alu 1 242 -70 316 259 0 74 chr17 64076590 64076698 -25427855 - HAL1 LINE L1 -550 1957 1858 1506 158 40 47 chr17 64076720 64076828 -25427725 + MER58B DNA MER1_type 47 154 -2266 2220 105 0 13 chr17 64076828 64077133 -25427420 + AluSg SINE Alu 1 301 -9 1506 158 40 47 chr17 64077133 64077321 -25427232 + MER58B DNA MER1_type 154 341 0 299 213 0 0 chr17 64077390 64077451 -25427102 - HAL1 LINE L1 -871 1636 1576 693 133 0 0 chr17 64077452 64077550 -25427003 + AluJ/FLAM SINE Alu 2 99 -213 1633 94 0 39 chr17 64077702 64077935 -25426618 + AluSg/x SINE Alu 72 295 -17 2044 96 68 0 chr17 64078177 64078457 -25426096 + AluSx SINE Alu 1 299 -13 2551 25 0 0 chr17 64078647 64078971 -25425582 + AluY SINE Alu 2 325 0 221 108 27 0 chr17 64079199 64079236 -25425317 + L2 LINE L2 3261 3298 -15 3279 144 26 0 chr17 64079466 64080009 -25424544 + L1MB3 LINE L1 5587 6143 -40 357 272 62 0 chr17 64080013 64080105 -25424448 + FLAM_A SINE Alu 13 99 -34 2002 125 14 0 chr17 64080142 64080443 -25424110 - AluSx SINE Alu 0 305 1 1618 151 60 42 chr17 64080463 64080692 -25423861 + L1MB8 LINE L1 5542 5780 -398 2388 98 3 0 chr17 64080692 64080998 -25423555 + AluSg SINE Alu 1 307 -3 1618 151 60 42 chr17 64080998 64081099 -25423454 + L1MB8 LINE L1 5780 5878 -300 747 104 9 0 chr17 64081100 64081206 -25423347 + AluSq/x SINE Alu 2 108 -205 240 245 0 0 chr17 64081306 64081355 -25423198 + AluJ/monomer SINE Alu 191 239 -63 1382 109 0 0 chr17 64081356 64081531 -25423022 - AluSx SINE Alu -137 175 1 378 113 0 0 chr17 64081538 64081591 -25422962 - FLAM SINE Alu -6 127 75 446 116 0 0 chr17 64081591 64081660 -25422893 + Alu SINE Alu 244 312 0 228 190 60 80 chr17 64081665 64081765 -25422788 + HAL1 LINE L1 2014 2111 -396 936 154 40 69 chr17 64081847 64081884 -25422669 - AluJo/FRAM SINE Alu -6 306 269 2268 117 0 0 chr17 64081884 64082183 -25422370 + AluSg SINE Alu 1 299 -11 936 154 40 69 chr17 64082183 64082320 -25422233 - AluJo/FRAM SINE Alu -43 269 137 605 256 30 0 chr17 64082384 64082552 -25422001 - MIR SINE MIR -57 205 33 1738 167 20 10 chr17 64082760 64083054 -25421499 + AluJb SINE Alu 1 297 -15 2324 72 3 56 chr17 64083579 64083898 -25420655 - AluSp SINE Alu -11 302 1 2408 91 3 0 chr17 64084087 64084385 -25420168 + AluSp SINE Alu 1 299 -14 424 264 60 24 chr17 64084592 64084759 -25419794 + MLT1H LTR MaLR 133 305 -244 229 247 10 72 chr17 64084793 64084890 -25419663 + MLT1H LTR MaLR 421 511 -38 1891 140 27 20 chr17 64084933 64085233 -25419320 - AluJb SINE Alu -10 302 1 2133 122 0 0 chr17 64085256 64085560 -25418993 - AluSc SINE Alu 0 304 1 865 143 0 0 chr17 64085580 64085713 -25418840 + FLAM_C SINE Alu 1 133 0 2222 93 0 42 chr17 64085754 64086067 -25418486 + AluY SINE Alu 1 300 -11 2418 64 17 14 chr17 64086148 64086444 -25418109 + AluSq SINE Alu 1 297 -16 864 146 0 0 chr17 64087027 64087157 -25417396 + AluJb SINE Alu 1 130 -182 2526 71 0 10 chr17 64087338 64087647 -25416906 - AluSc SINE Alu -3 306 1 2283 93 7 3 chr17 64088366 64088667 -25415886 + AluSg1 SINE Alu 1 302 -7 239 323 57 6 chr17 64089137 64089295 -25415258 - L1ME LINE L1 -304 5817 5652 21 36 0 0 chr17 64089305 64089333 -25415220 + AT_rich Low_complexity Low_complexity 1 28 0 1731 113 45 8 chr17 64090501 64090767 -25413786 + MER2 DNA MER2_type 1 276 -69 859 123 23 0 chr17 64090771 64090901 -25413652 - AluJb SINE Alu -12 300 168 348 118 0 0 chr17 64090929 64090980 -25413573 + FRAM/FAM SINE Alu 1 48 -118 2295 99 7 3 chr17 64091366 64091670 -25412883 - AluSc SINE Alu -4 305 1 1320 175 24 118 chr17 64091941 64092279 -25412274 - AluJo SINE Alu -5 307 2 2248 110 0 3 chr17 64092538 64092837 -25411716 + AluSq SINE Alu 1 298 -15 272 224 259 9 chr17 64093442 64093558 -25410995 - MER117 DNA MER1_type -1 196 52 2545 64 0 0 chr17 64094468 64094763 -25409790 - AluY SINE Alu -16 295 1 789 152 0 30 chr17 64094971 64095103 -25409450 - FLAM_C SINE Alu -5 128 1 713 199 100 85 chr17 64095144 64095415 -25409138 + HAL1 LINE L1 1340 1614 -893 2250 88 3 3 chr17 64095426 64095721 -25408832 + AluY SINE Alu 1 295 -16 572 214 34 53 chr17 64095721 64095927 -25408626 + HAL1 LINE L1 1823 2024 -483 865 131 0 23 chr17 64095927 64096057 -25408496 + FLAM_C SINE Alu 1 127 -16 2201 119 0 3 chr17 64096064 64096366 -25408187 + AluSx SINE Alu 1 301 -11 1977 130 0 20 chr17 64096533 64096834 -25407719 + AluSx SINE Alu 1 295 -17 2425 103 0 6 chr17 64096836 64097147 -25407406 + AluSq SINE Alu 1 309 -4 564 281 153 31 chr17 64097161 64097552 -25407001 - MLT1L LTR MaLR -89 526 88 1988 137 58 6 chr17 64097587 64097916 -25406637 - MER7A DNA MER2_type -1 345 2 207 91 0 0 chr17 64098171 64098204 -25406349 + MER5A DNA MER1_type 83 115 -74 406 164 15 0 chr17 64098204 64098271 -25406282 + MER3 DNA MER1_type 1 68 -141 2260 81 26 19 chr17 64098342 64098652 -25405901 - AluSq SINE Alu -1 312 1 1081 170 0 0 chr17 64098883 64099054 -25405499 - FRAM SINE Alu -7 169 1 258 284 137 0 chr17 64099060 64099162 -25405391 - L3 LINE CR1 -1235 342 227 1734 152 40 0 chr17 64099308 64099604 -25404949 - AluJb SINE Alu -4 308 1 1093 149 0 12 chr17 64099686 64099854 -25404699 - FRAM SINE Alu -12 164 1 2648 43 3 0 chr17 64100354 64100656 -25403897 - AluSp SINE Alu -10 303 1 274 297 10 47 chr17 64101355 64101547 -25403006 + MER5A DNA MER1_type 1 185 -4 1143 201 0 0 chr17 64103467 64103656 -25400897 + AluJb SINE Alu 96 284 -28 429 20 0 0 chr17 64103656 64103706 -25400847 + (CA)n Simple_repeat Simple_repeat 2 51 0 448 38 0 0 chr17 64103711 64103764 -25400789 - U2 snRNA snRNA -131 57 5 205 217 43 0 chr17 64103783 64103829 -25400724 + GA-rich Low_complexity Low_complexity 4 51 0 654 132 0 58 chr17 64103830 64103887 -25400666 + (GGAA)n Simple_repeat Simple_repeat 2 61 -119 1887 111 23 4 chr17 64103887 64104149 -25400404 + AluSx SINE Alu 1 267 -45 654 132 0 58 chr17 64104149 64104281 -25400272 + (GGAA)n Simple_repeat Simple_repeat 61 180 0 428 298 23 8 chr17 64104281 64104412 -25400141 + GA-rich Low_complexity Low_complexity 1 133 0 2091 117 9 57 chr17 64104635 64104951 -25399602 + AluSx SINE Alu 1 301 -11 2243 114 0 0 chr17 64106379 64106676 -25397877 + AluSq SINE Alu 1 297 -16 1773 175 3 0 chr17 64106687 64106973 -25397580 + AluSx SINE Alu 1 287 -25 1615 165 63 7 chr17 64107282 64107567 -25396986 - AluJo SINE Alu -11 301 1 960 107 21 0 chr17 64108861 64109001 -25395552 - AluSg/x SINE Alu -14 298 156 1982 146 3 0 chr17 64109137 64109438 -25395115 - AluJb SINE Alu -9 303 2 1964 141 7 3 chr17 64109616 64109921 -25394632 - AluSx SINE Alu -6 306 1 295 200 0 14 chr17 64109921 64109991 -25394562 - MER63 DNA MER1_type -48 1014 946 136 13 0 0 chr17 64110039 64110189 -25394364 + AT_rich Low_complexity Low_complexity 1 150 0 942 202 0 34 chr17 64110216 64110394 -25394159 + FAM SINE Alu 1 47 -2 2222 81 0 11 chr17 64110484 64110769 -25393784 - AluSq SINE Alu -31 282 1 2157 119 0 0 chr17 64110857 64111152 -25393401 - AluSc SINE Alu -14 295 1 1973 133 7 23 chr17 64111319 64111619 -25392934 - AluJo SINE Alu -13 299 5 21 57 0 0 chr17 64111643 64111678 -25392875 + AT_rich Low_complexity Low_complexity 1 35 0 1387 100 0 0 chr17 64111781 64111961 -25392592 + AluSc SINE Alu 61 240 -69 635 115 0 0 chr17 64111961 64112048 -25392505 + AluSc SINE Alu 204 290 -19 4222 153 22 22 chr17 64112063 64112651 -25391902 + L1MB3 LINE L1 5449 6039 -144 1938 117 31 7 chr17 64112651 64112941 -25391612 - AluSx SINE Alu -13 299 3 4222 153 22 22 chr17 64112941 64113086 -25391467 + L1MB3 LINE L1 6038 6182 -1 465 288 107 41 chr17 64113148 64113391 -25391162 + L2 LINE L2 2833 3091 -181 1724 191 0 3 chr17 64113552 64113856 -25390697 + AluJb SINE Alu 1 303 -9 2084 131 0 3 chr17 64114063 64114368 -25390185 + AluSx SINE Alu 3 306 -6 1909 149 3 29 chr17 64114499 64114815 -25389738 - AluJo SINE Alu -4 308 1 1134 129 0 0 chr17 64114859 64115022 -25389531 + AluSp SINE Alu 139 301 -12 273 29 0 0 chr17 64115067 64115101 -25389452 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 315 0 0 0 chr17 64115223 64115258 -25389295 + (CA)n Simple_repeat Simple_repeat 2 36 0 1042 89 0 15 chr17 64115474 64115609 -25388944 - FLAM_C SINE Alu 0 133 1 237 61 0 0 chr17 64115675 64115692 -25388861 + (A)n Simple_repeat Simple_repeat 1 17 -16 2153 119 14 3 chr17 64115692 64115985 -25388568 - AluSx SINE Alu -16 296 1 237 61 0 0 chr17 64115985 64116000 -25388553 + (A)n Simple_repeat Simple_repeat 16 33 0 400 231 75 8 chr17 64116005 64116139 -25388414 + L1ME2 LINE L1 4421 4563 -1583 920 143 0 0 chr17 64116144 64116277 -25388276 + FLAM_C SINE Alu 6 138 -5 1132 164 14 24 chr17 64116277 64116485 -25388068 - AluJb SINE Alu -23 289 84 1057 165 11 16 chr17 64116502 64116684 -25387869 + AluJb SINE Alu 132 312 0 1988 181 63 142 chr17 64116684 64117081 -25387472 + L1ME2 LINE L1 5321 5748 -416 1598 167 23 39 chr17 64117081 64117386 -25387167 + AluJo SINE Alu 11 310 -2 1988 181 63 142 chr17 64117386 64117399 -25387154 + L1ME2 LINE L1 5748 5760 -404 345 170 0 0 chr17 64117399 64117452 -25387101 + AluJ/FLAM SINE Alu 38 90 -212 1988 181 63 142 chr17 64117452 64117751 -25386802 + L1ME2 LINE L1 5760 6023 -141 661 167 19 0 chr17 64117755 64117863 -25386690 - FLAM_A SINE Alu -32 110 1 568 165 0 22 chr17 64117863 64117954 -25386599 + L1ME1 LINE L1 6017 6105 -61 813 186 6 19 chr17 64117967 64118123 -25386430 + FAM SINE Alu 12 165 -20 1701 183 0 17 chr17 64118300 64118601 -25385952 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 64120366 64120387 -25384166 + AT_rich Low_complexity Low_complexity 1 21 0 2249 77 14 0 chr17 64121628 64121915 -25382638 - AluSc SINE Alu -18 291 1 243 88 0 0 chr17 64122018 64122052 -25382501 + (A)n Simple_repeat Simple_repeat 1 34 0 475 267 167 13 chr17 64123924 64124074 -25380479 + MER5A DNA MER1_type 9 181 -8 678 108 0 0 chr17 64124494 64124587 -25379966 - AluY SINE Alu 0 311 219 1509 70 0 0 chr17 64124587 64124772 -25379781 - AluSc SINE Alu -124 185 1 304 279 169 15 chr17 64125037 64125173 -25379380 - L2 LINE L2 0 3272 3116 2051 126 0 23 chr17 64125266 64125568 -25378985 + AluSx SINE Alu 1 295 -17 363 316 9 26 chr17 64125568 64125673 -25378880 + L2 LINE L2 3204 3308 -5 263 366 94 5 chr17 64125806 64125997 -25378556 - L2 LINE L2 -467 2847 2640 1078 213 97 86 chr17 64125999 64126545 -25378008 + L1MC4 LINE L1 7491 8042 0 1875 108 4 0 chr17 64126717 64126966 -25377587 - AluSx SINE Alu -62 250 1 296 388 53 0 chr17 64127279 64127449 -25377104 + L2 LINE L2 2564 2742 -572 195 201 79 108 chr17 64127714 64127853 -25376700 + L2 LINE L2 3105 3239 -74 720 251 63 43 chr17 64127949 64128204 -25376349 - MIR SINE MIR 0 262 3 937 109 15 29 chr17 64128282 64128419 -25376134 - AluSq/x SINE Alu -177 135 1 1465 181 10 48 chr17 64128578 64128892 -25375661 - AluJo SINE Alu 0 302 1 2343 94 0 22 chr17 64128971 64129290 -25375263 + AluSx SINE Alu 1 312 0 1803 179 3 0 chr17 64129314 64129611 -25374942 + AluJb SINE Alu 1 298 -14 369 0 0 0 chr17 64130060 64130101 -25374452 + (CA)n Simple_repeat Simple_repeat 2 42 0 204 40 0 0 chr17 64130100 64130125 -25374428 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 632 213 103 98 chr17 64130299 64130577 -25373976 - HAL1 LINE L1 -15 2492 2210 2390 80 7 7 chr17 64130577 64130879 -25373674 - AluSp SINE Alu -11 302 1 632 213 103 98 chr17 64130879 64130948 -25373605 - HAL1 LINE L1 -297 2210 2143 1066 142 47 0 chr17 64130949 64131118 -25373435 - AluSg/x SINE Alu -20 290 114 1941 63 4 0 chr17 64131218 64131456 -25373097 + AluSp SINE Alu 75 313 0 22 0 0 0 chr17 64132305 64132327 -25372226 + AT_rich Low_complexity Low_complexity 1 22 0 40 21 0 0 chr17 64132459 64132506 -25372047 + AT_rich Low_complexity Low_complexity 1 47 0 2321 87 0 3 chr17 64132515 64132813 -25371740 + AluY SINE Alu 1 297 -14 2105 101 6 75 chr17 64132813 64133057 -25371496 - L1MA5A LINE L1 -12 6285 6070 4026 144 36 2 chr17 64133057 64133667 -25370886 - MER41B LTR ERV1 0 635 5 2105 101 6 75 chr17 64133667 64133768 -25370785 - L1MA5A LINE L1 -227 6070 5964 279 0 0 0 chr17 64133777 64133808 -25370745 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 2160 116 0 3 chr17 64133811 64134103 -25370450 - AluSx SINE Alu -21 291 1 250 65 0 0 chr17 64134140 64134171 -25370382 + Alu SINE Alu 14 44 -256 1053 138 0 0 chr17 64134182 64134334 -25370219 + AluSg/x SINE Alu 142 293 -19 29 0 0 0 chr17 64134622 64134651 -25369902 + AT_rich Low_complexity Low_complexity 1 29 0 760 90 90 0 chr17 64134656 64134801 -25369752 - Tigger3(Golem) DNA MER2_type -490 2539 2382 2185 111 3 3 chr17 64134814 64135111 -25369442 - AluSg SINE Alu -13 297 1 370 169 0 0 chr17 64135127 64135186 -25369367 + AluS SINE Alu 6 64 -244 734 145 8 8 chr17 64135192 64135309 -25369244 + AluJb SINE Alu 105 221 -91 241 232 146 0 chr17 64135843 64135925 -25368628 - MIR SINE MIR -38 224 131 221 366 50 10 chr17 64136299 64136400 -25368153 - L2 LINE L2 -5 3308 3204 2307 106 0 0 chr17 64136409 64136712 -25367841 + AluY SINE Alu 1 303 -8 2474 79 3 0 chr17 64136832 64137135 -25367418 - AluSp SINE Alu -9 304 1 341 98 0 0 chr17 64137139 64137190 -25367363 - Alu SINE Alu 0 300 250 980 154 0 0 chr17 64137191 64137334 -25367219 - AluSq/x SINE Alu -170 143 1 1708 158 3 11 chr17 64137691 64138005 -25366548 - AluJb SINE Alu 0 312 1 192 40 0 0 chr17 64138056 64138081 -25366472 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1778 155 0 46 chr17 64138312 64138640 -25365913 + AluSx SINE Alu 1 314 0 22 35 0 0 chr17 64139221 64139250 -25365303 + AT_rich Low_complexity Low_complexity 1 29 0 2226 113 0 16 chr17 64139282 64139592 -25364961 - AluSx SINE Alu -7 305 1 22 56 0 0 chr17 64140111 64140147 -25364406 + AT_rich Low_complexity Low_complexity 1 36 0 2105 60 0 26 chr17 64140754 64141022 -25363531 - AluY SINE Alu -16 295 35 14478 102 48 125 chr17 64141050 64141581 -25362972 - Tigger4(Zombi) DNA MER2_type 0 2731 2161 2655 42 3 0 chr17 64141581 64141890 -25362663 - AluY SINE Alu -1 310 1 2022 155 0 0 chr17 64141892 64142188 -25362365 - AluSx SINE Alu -16 296 1 14478 102 48 125 chr17 64142188 64142656 -25361897 - Tigger4(Zombi) DNA MER2_type -571 2160 1658 2372 81 3 0 chr17 64142656 64142951 -25361602 - AluSg SINE Alu -14 296 1 14478 102 48 125 chr17 64142951 64143195 -25361358 - Tigger4(Zombi) DNA MER2_type -1073 1658 1397 788 151 0 0 chr17 64143195 64143301 -25361252 + FLAM_C SINE Alu 2 107 -36 14478 102 48 125 chr17 64143301 64143496 -25361057 - Tigger4(Zombi) DNA MER2_type -1334 1397 1189 2606 65 0 0 chr17 64143496 64143805 -25360748 + AluY SINE Alu 1 309 -2 14478 102 48 125 chr17 64143805 64144440 -25360113 - Tigger4(Zombi) DNA MER2_type -1542 1189 815 2531 68 3 0 chr17 64144440 64144751 -25359802 + AluSp SINE Alu 1 312 -1 14478 102 48 125 chr17 64144751 64145424 -25359129 - Tigger4(Zombi) DNA MER2_type -1916 815 92 26 30 0 0 chr17 64145426 64145459 -25359094 + AT_rich Low_complexity Low_complexity 1 33 0 1082 65 0 14 chr17 64145459 64145597 -25358956 + AluSq/x SINE Alu 1 136 -177 1467 70 0 0 chr17 64145597 64145768 -25358785 + AluSq SINE Alu 1 171 -142 22 0 0 0 chr17 64145932 64145954 -25358599 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr17 64146049 64146080 -25358473 + AT_rich Low_complexity Low_complexity 1 31 0 2158 118 10 10 chr17 64146094 64146407 -25358146 - AluSp SINE Alu 0 313 1 2208 120 0 0 chr17 64146650 64146951 -25357602 - AluSx SINE Alu -11 301 1 1233 179 112 22 chr17 64147022 64147290 -25357263 + AluJo SINE Alu 1 292 -20 2436 95 0 0 chr17 64147297 64147603 -25356950 + AluSc SINE Alu 1 306 -3 2171 86 61 0 chr17 64147928 64148208 -25356345 + AluSg SINE Alu 1 297 -13 23 33 0 0 chr17 64148238 64148268 -25356285 + AT_rich Low_complexity Low_complexity 1 30 0 1876 100 0 80 chr17 64148339 64148452 -25356101 + AluSx SINE Alu 22 142 -170 2052 96 44 0 chr17 64148452 64148748 -25355805 + AluSp SINE Alu 1 308 0 1876 100 0 80 chr17 64148748 64148932 -25355621 + AluSx SINE Alu 142 296 -16 2160 103 0 7 chr17 64149257 64149547 -25355006 - AluSx SINE Alu -24 288 1 458 152 0 0 chr17 64149703 64149769 -25354784 - AluJb SINE Alu -34 278 213 1631 186 40 0 chr17 64149787 64150088 -25354465 - AluSq SINE Alu 0 313 1 808 216 5 37 chr17 64150107 64150297 -25354256 - AluJb SINE Alu -19 293 110 402 351 30 0 chr17 64150402 64150533 -25354020 + MIR3 SINE MIR 44 178 -30 1938 158 0 20 chr17 64150546 64150849 -25353704 + AluSx SINE Alu 1 297 -15 1804 168 28 3 chr17 64150919 64151210 -25353343 - AluJo SINE Alu -11 301 4 856 185 0 0 chr17 64151518 64151648 -25352905 - FLAM_A SINE Alu -3 130 1 21 0 0 0 chr17 64151689 64151710 -25352843 + AT_rich Low_complexity Low_complexity 1 21 0 218 31 0 31 chr17 64152105 64152137 -25352416 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2248 96 0 10 chr17 64152149 64152442 -25352111 - AluSq SINE Alu -23 290 1 23 0 0 0 chr17 64152448 64152471 -25352082 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr17 64153140 64153179 -25351374 + AT_rich Low_complexity Low_complexity 1 39 0 535 242 0 0 chr17 64153220 64153350 -25351203 - AluJb SINE Alu 0 320 191 243 245 0 0 chr17 64153388 64153441 -25351112 - AluSp SINE Alu -115 188 136 34 65 0 0 chr17 64153516 64153578 -25350975 + AT_rich Low_complexity Low_complexity 1 62 0 351 280 58 14 chr17 64153590 64153627 -25350926 + L1ME4a LINE L1 5661 5695 -426 2214 95 7 10 chr17 64153627 64153922 -25350631 + AluSx SINE Alu 1 294 -18 351 280 58 14 chr17 64153922 64154054 -25350499 + L1ME4a LINE L1 5695 5836 -285 2250 157 83 5 chr17 64154062 64154471 -25350082 + L1MC1 LINE L1 5888 6328 -5 2152 90 0 0 chr17 64154489 64154756 -25349797 + AluSx SINE Alu 1 267 -45 743 108 9 9 chr17 64154820 64154931 -25349622 - AluSg/x SINE Alu -3 307 197 728 121 47 40 chr17 64155162 64155190 -25349363 + MER53 DNA DNA 8 34 -155 2169 114 3 0 chr17 64155190 64155487 -25349066 + AluSq SINE Alu 1 298 -15 728 121 47 40 chr17 64155487 64155607 -25348946 + MER53 DNA DNA 34 157 -32 1072 201 44 97 chr17 64155618 64155937 -25348616 - AluJb SINE Alu 0 302 1 2325 54 0 13 chr17 64156197 64156495 -25348058 + AluY SINE Alu 1 294 -17 22 0 0 0 chr17 64156572 64156594 -25347959 + AT_rich Low_complexity Low_complexity 1 22 0 4633 123 315 90 chr17 64157567 64158955 -25345598 + pTR5 LTR ERV1 739 2438 0 641 162 0 0 chr17 64159708 64159813 -25344740 - AluJ SINE Alu -25 287 183 406 181 124 29 chr17 64159805 64159910 -25344643 - AluJ SINE Alu -162 150 36 * 1534 164 7 30 chr17 64160562 64160700 -25343853 + AluJo SINE Alu 1 141 -171 1411 182 73 0 chr17 64160700 64160975 -25343578 + AluSx SINE Alu 2 296 -16 1534 164 7 30 chr17 64160975 64161141 -25343412 + AluJo SINE Alu 141 298 -14 2108 131 0 0 chr17 64161905 64162217 -25342336 - AluSx SINE Alu 0 312 1 1321 201 49 0 chr17 64162954 64163238 -25341315 + AluJo SINE Alu 1 298 -14 1795 148 7 0 chr17 64163276 64163567 -25340986 + AluSx SINE Alu 5 297 -15 1783 127 42 7 chr17 64164190 64164500 -25340053 - AluSg SINE Alu 0 310 7 835 199 0 0 chr17 64164500 64164656 -25339897 - FRAM SINE Alu -20 156 1 180 307 212 15 chr17 64164687 64164824 -25339729 - L3 LINE CR1 -44 1533 1370 * 189 278 56 0 chr17 64164812 64164866 -25339687 + MIR3 SINE MIR 123 179 -29 2098 122 0 0 chr17 64165348 64165651 -25338902 - AluSx SINE Alu -9 303 1 1996 127 13 0 chr17 64165718 64166026 -25338527 - AluSx SINE Alu 0 312 1 828 203 7 7 chr17 64166031 64166184 -25338369 - FRAM SINE Alu -21 155 3 2267 90 3 0 chr17 64166198 64166508 -25338045 - AluY SINE Alu 0 311 1 183 80 0 0 chr17 64167021 64167046 -25337507 + (CCCCAA)n Simple_repeat Simple_repeat 6 30 0 1941 153 0 6 chr17 64167233 64167547 -25337006 - AluSx SINE Alu 0 312 1 2140 121 0 3 chr17 64167606 64167912 -25336641 - AluSx SINE Alu -7 305 1 1443 175 10 34 chr17 64169035 64169332 -25335221 + AluJo SINE Alu 1 290 -22 2084 106 3 3 chr17 64169399 64169700 -25334853 + AluSq SINE Alu 1 301 -12 364 355 76 15 chr17 64169786 64170048 -25334505 - L3 LINE CR1 -156 1421 1144 800 169 0 22 chr17 64170080 64170216 -25334337 - FLAM_C SINE Alu 0 133 1 1948 213 94 81 chr17 64170790 64171342 -25333211 - MER92B LTR ERV1 0 636 74 705 159 0 58 chr17 64171342 64171480 -25333073 - FLAM_A SINE Alu 0 133 4 1948 213 94 81 chr17 64171480 64171555 -25332998 - MER92B LTR ERV1 -562 74 1 1850 148 6 3 chr17 64171604 64171915 -25332638 - AluJb SINE Alu 0 312 1 319 238 63 23 chr17 64171982 64172127 -25332426 + L1MC4a LINE L1 5221 5378 -770 927 213 43 106 chr17 64172127 64172467 -25332086 + AluJb SINE Alu 2 322 0 319 238 63 23 chr17 64172467 64172497 -25332056 + L1MC4a LINE L1 5378 5405 -743 1919 121 14 0 chr17 64172512 64172792 -25331761 + AluSx SINE Alu 1 284 -28 2274 84 7 0 chr17 64172803 64173100 -25331453 + AluSx SINE Alu 1 299 -13 947 279 34 11 chr17 64173161 64173426 -25331127 - MLT1J LTR MaLR -240 271 1 289 297 119 35 chr17 64173430 64173632 -25330921 + L1MC4a LINE L1 5406 5624 -2184 547 283 16 11 chr17 64173642 64173829 -25330724 + L1MC4a LINE L1 5679 5866 -1942 1889 136 0 3 chr17 64173877 64174197 -25330356 + AluSx SINE Alu 1 319 0 1924 89 0 36 chr17 64174272 64174552 -25330001 + AluSx SINE Alu 36 305 -7 562 320 8 10 chr17 64174603 64174871 -25329682 - MLT1K LTR MaLR 0 588 286 1197 244 88 33 chr17 64175056 64175255 -25329298 + LTR33A LTR ERVL 54 240 -283 2270 112 0 0 chr17 64175255 64175567 -25328986 - AluSx SINE Alu 0 312 1 1197 244 88 33 chr17 64175567 64175797 -25328756 + LTR33A LTR ERVL 240 507 -16 392 186 0 47 chr17 64175946 64176009 -25328544 + MIR SINE MIR 94 154 -108 1487 226 116 30 chr17 64176009 64176474 -25328079 + MLT1D LTR MaLR 1 505 0 392 186 0 47 chr17 64176474 64176496 -25328057 + MIR SINE MIR 154 175 -87 2148 115 41 54 chr17 64176496 64176888 -25327665 - MLT1B LTR MaLR 0 390 4 742 189 0 0 chr17 64177136 64177258 -25327295 - FLAM_C SINE Alu -20 123 2 253 261 217 17 chr17 64177274 64177389 -25327164 + L2 LINE L2 3134 3271 -1 198 128 0 0 chr17 64177689 64177728 -25326825 + (TCC)n Simple_repeat Simple_repeat 1 39 0 360 0 0 0 chr17 64178316 64178356 -25326197 + (CA)n Simple_repeat Simple_repeat 1 40 0 702 155 0 0 chr17 64178955 64179058 -25325495 + FLAM_C SINE Alu 14 116 -27 522 203 34 20 chr17 64179592 64179740 -25324813 - L1ME4a LINE L1 -5 6116 5967 1763 157 0 29 chr17 64179847 64180160 -25324393 + AluJo SINE Alu 1 304 -8 2016 126 3 3 chr17 64180418 64180727 -25323826 - AluSx SINE Alu -3 309 1 312 277 32 0 chr17 64180755 64180849 -25323704 - L1ME4a LINE L1 -414 5707 5611 2185 81 24 0 chr17 64180901 64181197 -25323356 - AluSg1 SINE Alu -6 303 1 2015 94 0 0 chr17 64181305 64181570 -25322983 - AluY SINE Alu -14 297 33 1817 138 25 3 chr17 64181889 64182172 -25322381 + AluJb SINE Alu 1 289 -23 1929 129 0 26 chr17 64182305 64182445 -25322108 + AluSx SINE Alu 1 143 -169 2184 99 0 0 chr17 64182445 64182739 -25321814 + AluSg SINE Alu 1 294 -16 1929 129 0 26 chr17 64182739 64182907 -25321646 + AluSx SINE Alu 143 301 -11 811 300 52 88 chr17 64182972 64183492 -25321061 - L2 LINE L2 -9 3304 2804 743 212 0 7 chr17 64184365 64184502 -25320051 + AluJo SINE Alu 2 137 -175 2338 53 0 0 chr17 64184534 64184843 -25319710 - AluY SINE Alu 0 309 1 883 114 0 30 chr17 64184845 64184976 -25319577 - AluJo/FLAM SINE Alu -175 127 1 28 0 0 26 chr17 64184986 64185005 -25319548 + AT_rich Low_complexity Low_complexity 1 19 -19 1675 74 4 9 chr17 64185005 64185234 -25319319 - L1PB1 LINE L1 -1 6150 5923 28 0 0 26 chr17 64185234 64185253 -25319300 + AT_rich Low_complexity Low_complexity 19 38 0 338 263 32 70 chr17 64185308 64185464 -25319089 - MLT1J LTR MaLR -172 339 190 2123 106 27 0 chr17 64185740 64186041 -25318512 + AluSq SINE Alu 1 309 -4 1439 152 48 55 chr17 64186342 64186632 -25317921 + AluJo SINE Alu 13 300 -12 1439 152 48 55 chr17 64187088 64187378 -25317175 + AluJo SINE Alu 13 300 -12 1022 194 5 37 chr17 64187627 64187844 -25316709 + AluJo SINE Alu 86 295 -17 207 0 0 0 chr17 64188006 64188029 -25316524 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1481 111 0 0 chr17 64188031 64188230 -25316323 - AluSg/x SINE Alu -21 291 93 1674 109 98 11 chr17 64188337 64188611 -25315942 + AluSx SINE Alu 3 300 -12 1946 136 0 7 chr17 64188870 64189178 -25315375 + AluJb SINE Alu 1 306 -6 1884 161 0 13 chr17 64189178 64189494 -25315059 + AluSx SINE Alu 1 312 0 1735 173 3 10 chr17 64189505 64189806 -25314747 + AluJo SINE Alu 1 299 -13 2225 78 17 0 chr17 64190178 64190471 -25314082 + AluSq SINE Alu 1 298 -15 26 0 0 0 chr17 64190488 64190514 -25314039 + AT_rich Low_complexity Low_complexity 1 26 0 1967 147 0 16 chr17 64190522 64190835 -25313718 + AluSx SINE Alu 1 308 -4 1699 176 3 10 chr17 64190843 64191144 -25313409 + AluJo SINE Alu 1 299 -13 2179 86 17 0 chr17 64191515 64191806 -25312747 + AluSq SINE Alu 1 296 -17 26 0 0 0 chr17 64191823 64191849 -25312704 + AT_rich Low_complexity Low_complexity 1 26 0 1957 140 3 13 chr17 64191857 64192172 -25312381 + AluJb SINE Alu 1 312 0 2346 71 0 0 chr17 64192382 64192677 -25311876 + AluY SINE Alu 1 295 -16 1802 133 3 48 chr17 64192719 64193034 -25311519 + AluSx SINE Alu 2 302 -10 1907 127 7 0 chr17 64193046 64193330 -25311223 + AluSx SINE Alu 1 286 -26 337 51 112 0 chr17 64193330 64193428 -25311125 + (TA)n Simple_repeat Simple_repeat 2 110 0 417 202 8 70 chr17 64193525 64193561 -25310992 - L1ME3A LINE L1 -223 5947 5910 2158 114 0 0 chr17 64193561 64193868 -25310685 + AluSc SINE Alu 1 307 -2 417 202 8 70 chr17 64193868 64193960 -25310593 - L1ME3A LINE L1 -260 5910 5827 1163 92 30 0 chr17 64194133 64194297 -25310256 - AluSg/x SINE Alu -16 296 128 2454 47 3 0 chr17 64194298 64194599 -25309954 - AluSq SINE Alu -3 310 9 836 142 0 8 chr17 64198465 64198592 -25305961 + FLAM_C SINE Alu 1 126 -17 1946 99 0 33 chr17 64198761 64199063 -25305490 + AluSx SINE Alu 1 292 -20 1961 115 16 3 chr17 64199163 64199467 -25305086 - AluSg SINE Alu -2 308 1 441 0 0 0 chr17 64200130 64200179 -25304374 + (T)n Simple_repeat Simple_repeat 1 49 0 21 0 0 0 chr17 64200853 64200874 -25303679 + AT_rich Low_complexity Low_complexity 1 21 0 1479 94 5 0 chr17 64201012 64201214 -25303339 - AluSx SINE Alu -64 248 46 1029 96 0 0 chr17 64201214 64201350 -25303203 - AluSq/x SINE Alu -176 136 1 2186 79 14 3 chr17 64201557 64201848 -25302705 - AluSx SINE Alu -18 294 1 691 202 0 8 chr17 64201848 64201972 -25302581 - AluJo SINE Alu -177 135 13 373 353 29 7 chr17 64202507 64202643 -25301910 + MIR3 SINE MIR 16 154 -54 413 194 68 39 chr17 64202644 64202663 -25301890 + L1 LINE L1 4077 4094 -2052 1904 158 0 3 chr17 64202663 64202974 -25301579 - AluJo SINE Alu -2 310 1 413 194 68 39 chr17 64202974 64203057 -25301496 + L1 LINE L1 4094 4182 -1964 1106 158 0 11 chr17 64203057 64203247 -25301306 + AluSx SINE Alu 4 191 -121 520 99 14 0 chr17 64203249 64203320 -25301233 + AluSc SINE Alu 59 130 -179 2785 137 7 5 chr17 64203323 64203745 -25300808 + MER50 LTR ERV1 289 711 -23 27 0 0 0 chr17 64203859 64203886 -25300667 + AT_rich Low_complexity Low_complexity 1 27 0 2108 111 48 124 chr17 64204021 64204159 -25300394 + MER61B LTR ERV1 1 148 -277 1934 129 13 13 chr17 64204159 64204461 -25300092 - AluSq SINE Alu -11 302 1 2108 111 48 124 chr17 64204461 64204482 -25300071 + MER61B LTR ERV1 148 169 -256 1877 136 35 0 chr17 64204482 64204768 -25299785 - AluSx SINE Alu -16 296 1 2108 111 48 124 chr17 64204768 64205067 -25299486 + MER61B LTR ERV1 169 425 0 1980 130 0 0 chr17 64205322 64205630 -25298923 + AluSx SINE Alu 1 308 0 2022 111 10 0 chr17 64205739 64206036 -25298517 - AluSq SINE Alu -13 300 1 1848 110 3 20 chr17 64206065 64206357 -25298196 + AluSq SINE Alu 1 287 -26 2684 139 45 5 chr17 64206475 64206920 -25297633 - Tigger3(Golem) DNA MER2_type -2 3027 2565 234 0 0 0 chr17 64207121 64207147 -25297406 + (A)n Simple_repeat Simple_repeat 1 26 0 2190 86 61 0 chr17 64207469 64207749 -25296804 + AluSg SINE Alu 1 297 -13 23 33 0 0 chr17 64207779 64207809 -25296744 + AT_rich Low_complexity Low_complexity 1 30 0 1893 100 0 80 chr17 64207880 64207993 -25296560 + AluSx SINE Alu 22 142 -170 2077 96 44 0 chr17 64207993 64208289 -25296264 + AluSp SINE Alu 1 308 0 1893 100 0 80 chr17 64208289 64208473 -25296080 + AluSx SINE Alu 142 296 -16 2185 103 0 7 chr17 64208798 64209088 -25295465 - AluSx SINE Alu -24 288 1 415 138 15 0 chr17 64209244 64209309 -25295244 - AluJb SINE Alu -34 278 213 2304 90 36 0 chr17 64209327 64209628 -25294925 - AluSx SINE Alu 0 312 1 1968 122 3 20 chr17 64209647 64209950 -25294603 - AluJo SINE Alu -14 298 1 208 211 0 0 chr17 64210778 64210816 -25293737 + (CCG)n Simple_repeat Simple_repeat 3 40 0 270 0 0 0 chr17 64211700 64211730 -25292823 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2255 81 7 3 chr17 64212421 64212755 -25291798 - AluY SINE Alu 0 311 1 2404 93 3 0 chr17 64212766 64213078 -25291475 - AluSq SINE Alu 0 313 1 973 123 0 0 chr17 64214042 64214172 -25290381 + AluSg/x SINE Alu 149 278 -32 422 145 0 0 chr17 64214228 64214290 -25290263 - AluJ/FRAM SINE Alu -22 290 229 2007 166 131 38 chr17 64214298 64214604 -25289949 + Charlie1 DNA MER1_type 1981 2257 -504 2496 64 0 10 chr17 64214604 64214918 -25289635 + AluY SINE Alu 1 311 0 2007 166 131 38 chr17 64214918 64214933 -25289620 + Charlie1 DNA MER1_type 2257 2269 -492 958 193 24 0 chr17 64214933 64215099 -25289454 + FAM SINE Alu 1 170 -5 2007 166 131 38 chr17 64215099 64215339 -25289214 + Charlie1 DNA MER1_type 2269 2599 -162 1976 133 6 43 chr17 64215339 64215661 -25288892 - AluSx SINE Alu -2 310 1 534 156 33 0 chr17 64215710 64215800 -25288753 - L1MC4a LINE L1 -499 7309 7217 413 103 0 0 chr17 64215826 64215884 -25288669 - Alu SINE Alu -259 59 2 2119 137 3 0 chr17 64215971 64216278 -25288275 - AluSx SINE Alu -4 308 1 518 174 74 16 chr17 64216278 64216399 -25288154 - L1MC4 LINE L1 -982 7060 6933 2083 103 3 21 chr17 64216952 64217234 -25287319 - AluSq SINE Alu -32 281 5 2105 108 25 0 chr17 64217411 64217689 -25286864 + AluSx SINE Alu 11 295 -17 24 32 0 0 chr17 64217797 64217828 -25286725 + AT_rich Low_complexity Low_complexity 1 31 0 183 204 0 0 chr17 64217873 64217917 -25286636 + (TAA)n Simple_repeat Simple_repeat 3 46 0 404 173 28 201 chr17 64217946 64218145 -25286408 - MER104 DNA Tc2 -1721 177 16 2293 111 0 7 chr17 64218145 64218451 -25286102 + AluSx SINE Alu 1 304 -8 404 173 28 201 chr17 64218451 64218465 -25286088 - MER104 DNA Tc2 -1882 16 1 303 237 113 21 chr17 64218513 64218610 -25285943 - MIR SINE MIR -155 107 2 2058 133 17 0 chr17 64218860 64219153 -25285400 + AluJo SINE Alu 1 298 -14 575 122 78 0 chr17 64219246 64219336 -25285217 + Tigger4(Zombi) DNA MER2_type 1 97 -2634 1182 117 6 0 chr17 64219376 64219587 -25284966 - AluSg/x SINE Alu 0 332 121 1374 83 12 0 chr17 64219608 64219777 -25284776 - AluSq SINE Alu -142 171 1 760 147 0 22 chr17 64219780 64219916 -25284637 - AluJo/FLAM SINE Alu -169 133 1 26 30 0 0 chr17 64219916 64219949 -25284604 + AT_rich Low_complexity Low_complexity 1 33 0 3687 138 16 53 chr17 64219951 64220624 -25283929 + Tigger4(Zombi) DNA MER2_type 92 830 -1901 2582 74 3 0 chr17 64220624 64220935 -25283618 - AluSp SINE Alu -1 312 1 360 59 0 0 chr17 64220939 64220990 -25283563 - Alu SINE Alu 0 301 251 1017 140 0 0 chr17 64220991 64221134 -25283419 - AluSq/x SINE Alu -170 143 1 1728 158 3 11 chr17 64221491 64221805 -25282748 - AluJb SINE Alu 0 312 1 192 40 0 0 chr17 64221856 64221881 -25282672 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1795 155 0 46 chr17 64222112 64222440 -25282113 + AluSx SINE Alu 1 314 0 22 35 0 0 chr17 64223021 64223050 -25281503 + AT_rich Low_complexity Low_complexity 1 29 0 2224 113 0 16 chr17 64223082 64223391 -25281162 - AluSx SINE Alu -8 304 1 22 56 0 0 chr17 64223910 64223946 -25280607 + AT_rich Low_complexity Low_complexity 1 36 0 2126 60 0 26 chr17 64224553 64224821 -25279732 - AluY SINE Alu -16 295 35 7931 109 17 36 chr17 64224849 64225380 -25279173 - Tigger4(Zombi) DNA MER2_type 0 2731 2191 2682 42 3 0 chr17 64225380 64225689 -25278864 - AluY SINE Alu -1 310 1 2040 155 0 0 chr17 64225691 64225987 -25278566 - AluSx SINE Alu -16 296 1 7931 109 17 36 chr17 64225987 64226455 -25278098 - Tigger4(Zombi) DNA MER2_type -541 2190 1755 2393 81 3 0 chr17 64226455 64226750 -25277803 - AluSg SINE Alu -14 296 1 7931 109 17 36 chr17 64226750 64226992 -25277561 - Tigger4(Zombi) DNA MER2_type -976 1755 1510 743 151 0 0 chr17 64226994 64227100 -25277453 + FLAM_C SINE Alu 2 107 -36 676 132 0 9 chr17 64227103 64227209 -25277344 - Tigger4(Zombi) DNA MER2_type -189 2542 2438 21 36 0 0 chr17 64227209 64227237 -25277316 + AT_rich Low_complexity Low_complexity 1 28 0 255 241 8 99 chr17 64227248 64227295 -25277258 - Tigger4(Zombi) DNA MER2_type -1222 1509 1459 2380 79 3 7 chr17 64227295 64227600 -25276953 + AluY SINE Alu 1 304 -7 255 241 8 99 chr17 64227600 64227814 -25276739 - Tigger4(Zombi) DNA MER2_type -1272 1459 1272 1117 185 19 0 chr17 64228355 64228571 -25275982 + AluSg/x SINE Alu 67 286 -26 337 51 112 0 chr17 64228571 64228669 -25275884 + (TA)n Simple_repeat Simple_repeat 2 110 0 430 202 8 70 chr17 64228766 64228802 -25275751 - L1ME3A LINE L1 -223 5947 5910 2291 114 0 0 chr17 64228802 64229110 -25275443 + AluSc SINE Alu 1 308 -1 430 202 8 70 chr17 64229110 64229202 -25275351 - L1ME3A LINE L1 -260 5910 5827 1159 107 41 0 chr17 64229375 64229544 -25275009 - AluSg/x SINE Alu -16 296 121 647 228 30 30 chr17 64229544 64229776 -25274777 - AluSp SINE Alu -9 304 73 2250 111 0 0 chr17 64229884 64230182 -25274371 - AluSx SINE Alu -14 298 1 1585 149 67 4 chr17 64231571 64231862 -25272691 - AluJb SINE Alu 0 308 1 1894 140 0 60 chr17 64232572 64232887 -25271666 + AluSx SINE Alu 1 296 -16 2369 93 0 3 chr17 64232889 64233191 -25271362 + AluY SINE Alu 1 301 -10 2165 116 3 0 chr17 64233254 64233547 -25271006 + AluSq SINE Alu 1 294 -19 2115 129 7 0 chr17 64234004 64234298 -25270255 - AluSx SINE Alu -16 296 1 185 192 0 39 chr17 64234608 64234660 -25269893 + CT-rich Low_complexity Low_complexity 1 50 0 528 271 150 58 chr17 64234776 64235015 -25269538 + L1ME LINE L1 5318 5534 -587 1745 185 10 3 chr17 64235015 64235307 -25269246 - AluJo SINE Alu -18 294 1 528 271 150 58 chr17 64235307 64235481 -25269072 + L1ME LINE L1 5534 5769 -352 1765 151 16 23 chr17 64235481 64235785 -25268768 + AluSx SINE Alu 1 302 -10 2279 92 0 30 chr17 64235795 64236099 -25268454 + AluSg SINE Alu 1 295 -15 833 73 278 0 chr17 64236497 64236648 -25267905 - AluY SINE Alu 0 311 119 2452 41 48 3 chr17 64236676 64236971 -25267582 + AluY SINE Alu 1 308 -3 2212 119 3 0 chr17 64237176 64237487 -25267066 + AluSx SINE Alu 1 312 0 2081 119 24 3 chr17 64237713 64238007 -25266546 + AluSx SINE Alu 1 300 -12 1845 168 20 0 chr17 64238071 64238369 -25266184 - AluJb SINE Alu -8 304 1 2133 103 6 19 chr17 64238865 64239177 -25265376 + AluSq SINE Alu 1 308 -5 718 144 75 92 chr17 64239239 64239413 -25265140 - MLT1B LTR MaLR -219 171 1 2243 102 0 7 chr17 64239671 64239966 -25264587 - AluSx SINE Alu -19 293 1 227 276 0 53 chr17 64240587 64240663 -25263890 - L2 LINE L2 -867 2447 2376 282 61 0 0 chr17 64240717 64240750 -25263803 + U2 snRNA snRNA 1 33 -155 531 302 68 5 chr17 64240839 64241031 -25263522 - MIR SINE MIR -10 252 49 2171 114 0 3 chr17 64241035 64241334 -25263219 - AluSq SINE Alu -15 298 1 1671 161 40 43 chr17 64241468 64241592 -25262961 + AluJo SINE Alu 1 124 -188 2344 94 3 7 chr17 64241592 64241900 -25262653 - AluSg SINE Alu -3 307 1 1671 161 40 43 chr17 64241900 64242079 -25262474 + AluJo SINE Alu 124 303 -9 1448 133 167 26 chr17 64242433 64242697 -25261856 - AluJo SINE Alu -1 301 1 536 179 98 18 chr17 64243085 64243197 -25261356 + FLAM_C SINE Alu 2 122 -21 434 162 54 0 chr17 64243223 64243297 -25261256 + AluJ/FRAM SINE Alu 220 297 -15 279 0 0 0 chr17 64243347 64243378 -25261175 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 0 0 0 chr17 64243377 64243397 -25261156 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 1673 146 42 4 chr17 64243404 64243665 -25260888 - AluSx SINE Alu -23 289 19 702 171 0 8 chr17 64243710 64243839 -25260714 + FLAM_C SINE Alu 5 132 -11 2118 110 3 3 chr17 64243915 64244206 -25260347 + AluSx SINE Alu 1 291 -21 2302 111 0 0 chr17 64244216 64244514 -25260039 + AluSx SINE Alu 1 298 -14 2218 107 0 0 chr17 64244525 64244809 -25259744 + AluSx SINE Alu 1 285 -23 222 37 0 0 chr17 64244809 64244836 -25259717 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 5299 113 37 28 chr17 64245157 64245968 -25258585 - LTR5 LTR ERVK -151 818 1 2272 94 3 16 chr17 64246002 64246309 -25258244 - AluSq SINE Alu -10 303 1 1968 93 82 0 chr17 64246460 64246739 -25257814 + AluSg SINE Alu 1 302 -8 1812 176 0 10 chr17 64246985 64247286 -25257267 - AluJo SINE Alu -14 298 1 2444 90 0 0 chr17 64247669 64247969 -25256584 - AluSx SINE Alu -12 300 1 262 308 88 0 chr17 64248124 64248215 -25256338 - L2 LINE L2 -2 3270 3172 2200 115 7 0 chr17 64248306 64248602 -25255951 + AluSp SINE Alu 1 298 -15 1977 46 0 4 chr17 64249402 64249639 -25254914 + AluY SINE Alu 75 310 -1 279 0 0 0 chr17 64249681 64249712 -25254841 + (GTTTG)n Simple_repeat Simple_repeat 2 32 0 2001 134 0 10 chr17 64249742 64250040 -25254513 + AluSx SINE Alu 1 295 -17 787 156 0 8 chr17 64250048 64250170 -25254383 + FLAM_C SINE Alu 1 121 -12 254 246 0 0 chr17 64250192 64250249 -25254304 - L2 LINE L2 -47 3225 3169 2149 102 35 0 chr17 64250329 64250613 -25253940 - AluSx SINE Alu -18 294 1 773 151 0 0 chr17 64250944 64251063 -25253490 - FLAM_C SINE Alu -14 119 1 1306 194 159 3 chr17 64251079 64251362 -25253191 - MER58B DNA MER1_type -14 327 1 653 155 17 0 chr17 64251631 64251747 -25252806 - AluSx SINE Alu -1 309 192 1098 90 0 21 chr17 64251748 64251892 -25252661 - AluSx SINE Alu -172 141 1 753 178 0 0 chr17 64252639 64252784 -25251769 + FLAM_C SINE Alu 2 146 0 1957 115 3 64 chr17 64252796 64253126 -25251427 + AluSx SINE Alu 1 310 -2 2443 68 0 3 chr17 64253214 64253506 -25251047 - AluSg SINE Alu -19 291 1 352 196 45 54 chr17 64253510 64253591 -25250962 + L2 LINE L2 2471 2552 -762 2888 138 62 6 chr17 64253591 64254071 -25250482 + MER84 LTR ERV1 1 507 0 352 196 45 54 chr17 64254071 64254101 -25250452 + L2 LINE L2 2552 2581 -733 2305 100 3 10 chr17 64254136 64254446 -25250107 + AluSq SINE Alu 3 310 -3 743 212 55 55 chr17 64254454 64254709 -25249844 + L2 LINE L2 3059 3313 0 2263 104 3 16 chr17 64255047 64255363 -25249190 + AluSp SINE Alu 2 313 0 296 85 85 0 chr17 64255518 64255565 -25248988 - L1MA5A LINE L1 -7 6290 6240 748 151 8 0 chr17 64255608 64255727 -25248826 - L1MA5A LINE L1 -35 6262 6143 939 170 59 0 chr17 64255727 64255880 -25248673 - AluJb SINE Alu -22 290 129 302 100 45 9 chr17 64255905 64256020 -25248533 + CT-rich Low_complexity Low_complexity 1 119 0 1278 110 161 28 chr17 64256039 64256293 -25248260 - L1MA5A LINE L1 -146 6151 5864 2542 102 7 44 chr17 64256344 64256623 -25247930 + L1MA9 LINE L1 5556 5817 -495 2490 64 0 22 chr17 64256623 64256937 -25247616 + AluY SINE Alu 3 309 -2 2542 102 7 44 chr17 64256937 64257068 -25247485 + L1MA9 LINE L1 5817 5951 -361 2104 79 36 0 chr17 64257213 64257491 -25247062 + AluY SINE Alu 2 289 -22 207 0 0 0 chr17 64257506 64257529 -25247024 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 669 215 0 15 chr17 64257529 64257664 -25246889 + FLAM_A SINE Alu 1 133 0 2033 164 21 11 chr17 64257666 64258038 -25246515 + L1MA9 LINE L1 5937 6312 0 6119 73 18 70 chr17 64258157 64258583 -25245970 + L1PA12 LINE L1 5279 5632 -536 2165 129 0 3 chr17 64258583 64258892 -25245661 - AluSq SINE Alu -2 311 4 6119 73 18 70 chr17 64258892 64259399 -25245154 + L1PA12 LINE L1 5632 6164 -4 330 305 113 24 chr17 64259402 64259615 -25244938 - MIR SINE MIR 0 262 31 2116 128 7 0 chr17 64259702 64259998 -25244555 - AluSx SINE Alu -14 298 1 2200 120 0 0 chr17 64260574 64260874 -25243679 - AluSx SINE Alu -12 300 1 2474 78 3 3 chr17 64260901 64261207 -25243346 - AluSp SINE Alu -7 306 1 1444 226 20 0 chr17 64261488 64261785 -25242768 + AluJb SINE Alu 1 303 -9 2232 102 0 10 chr17 64261999 64262162 -25242391 - AluSx SINE Alu -16 296 136 2144 101 0 24 chr17 64262162 64262483 -25242070 - AluSg SINE Alu 0 310 1 2232 102 0 10 chr17 64262483 64262614 -25241939 - AluSx SINE Alu -176 136 5 29 47 0 0 chr17 64262628 64262671 -25241882 + AT_rich Low_complexity Low_complexity 1 43 0 2439 81 0 3 chr17 64262803 64263113 -25241440 + AluSg SINE Alu 1 309 -1 2068 123 13 3 chr17 64263215 64263524 -25241029 + AluSq SINE Alu 1 312 -1 312 91 0 0 chr17 64263524 64263568 -25240985 + (TA)n Simple_repeat Simple_repeat 2 45 0 742 160 7 56 chr17 64263811 64263955 -25240598 + AluJo SINE Alu 2 138 -174 2479 47 40 0 chr17 64263962 64264258 -25240295 + AluY SINE Alu 1 308 -3 2299 91 0 3 chr17 64264265 64264572 -25239981 + AluY SINE Alu 1 306 -5 2041 118 4 7 chr17 64264577 64264856 -25239697 + AluSq SINE Alu 1 278 -35 2284 89 4 0 chr17 64264857 64265166 -25239387 + AluSp SINE Alu 1 310 0 22 0 0 0 chr17 64265185 64265207 -25239346 + AT_rich Low_complexity Low_complexity 1 22 0 829 219 0 6 chr17 64265207 64265371 -25239182 + FRAM SINE Alu 1 155 -21 1842 141 0 4 chr17 64265378 64265654 -25238899 + AluJo SINE Alu 9 283 -29 681 198 11 9 chr17 64265664 64265825 -25238728 - MER34B LTR ERV1 -385 157 9 994 203 37 28 chr17 64265928 64266145 -25238408 - MER20 DNA MER1_type 0 219 1 3010 169 108 33 chr17 64266337 64266721 -25237832 + L1MC3 LINE L1 6184 6075 -269 2204 125 3 0 chr17 64266721 64267032 -25237521 + AluSx SINE Alu 1 312 0 3010 169 108 33 chr17 64267032 64267318 -25237235 + L1MC3 LINE L1 6074 6337 -7 2127 98 39 0 chr17 64267325 64267610 -25236943 - AluSx SINE Alu -16 296 1 1553 168 59 21 chr17 64267707 64267993 -25236560 - AluJo SINE Alu -15 297 1 2286 105 7 0 chr17 64268160 64268456 -25236097 - AluSp SINE Alu -15 298 1 2273 117 0 0 chr17 64268456 64268753 -25235800 - AluSx SINE Alu -14 298 1 233 198 70 70 chr17 64268846 64268932 -25235621 - MIR SINE MIR -91 171 86 946 172 50 11 chr17 64269091 64269271 -25235282 - AluSg1 SINE Alu -122 187 1 526 159 204 0 chr17 64269308 64269421 -25235132 + AluSp/q SINE Alu 160 295 -18 23 0 0 0 chr17 64269421 64269444 -25235109 + AT_rich Low_complexity Low_complexity 1 23 0 951 189 142 51 chr17 64269450 64269725 -25234828 + AluJo SINE Alu 2 301 -1 368 272 25 109 chr17 64269739 64269941 -25234612 - L1MC/D LINE L1 -2163 5645 5461 1169 102 0 6 chr17 64269941 64270107 -25234446 - AluSc SINE Alu -7 302 138 399 190 88 36 chr17 64270116 64270253 -25234300 - L1MC/D LINE L1 -2341 5467 5324 2094 105 3 59 chr17 64270318 64270641 -25233912 - AluSq SINE Alu -7 306 2 280 175 79 0 chr17 64270700 64270763 -25233790 + MIR SINE MIR 53 120 -142 728 237 185 17 chr17 64270777 64270876 -25233677 - MER46C DNA MER2_type -3 335 254 2008 116 3 11 chr17 64270876 64271186 -25233367 - AluSx SINE Alu 0 308 1 728 237 185 17 chr17 64271186 64271372 -25233181 - MER46C DNA MER2_type -84 254 1 230 267 0 58 chr17 64271373 64271459 -25233094 + MIR SINE MIR 170 250 -12 212 271 178 8 chr17 64271693 64271811 -25232742 + MIR SINE MIR 117 254 -8 844 258 203 27 chr17 64272765 64273006 -25231547 - L2 LINE L2 -39 3274 3077 2083 111 24 0 chr17 64273006 64273294 -25231259 - AluSx SINE Alu -16 296 2 844 258 203 27 chr17 64273294 64273739 -25230814 - L2 LINE L2 -236 3077 2452 436 183 29 29 chr17 64274696 64274800 -25229753 - MIR3 SINE MIR -14 194 91 1343 26 0 0 chr17 64275726 64275881 -25228672 - L1PA4 LINE L1 -3 6152 5998 23 54 0 0 chr17 64276559 64276596 -25227957 + GC_rich Low_complexity Low_complexity 1 37 0 538 234 71 49 chr17 64278247 64278431 -25226122 + MER112 DNA MER1_type 72 259 -1 297 240 141 25 chr17 64278434 64278555 -25225998 - MER5A DNA MER1_type 0 189 55 336 24 0 0 chr17 64279281 64279322 -25225231 + (CA)n Simple_repeat Simple_repeat 1 41 0 376 278 171 65 chr17 64279989 64280269 -25224284 + L2 LINE L2 2700 2949 -364 2130 108 14 3 chr17 64280269 64280564 -25223989 - AluSx SINE Alu -14 298 1 376 278 171 65 chr17 64280564 64280834 -25223719 + L2 LINE L2 2949 3310 -3 487 255 165 9 chr17 64281175 64281387 -25223166 + MIR SINE MIR 16 260 -2 2674 36 0 7 chr17 64281895 64282203 -25222350 - AluY SINE Alu -5 306 1 292 329 7 35 chr17 64282501 64282644 -25221909 - MIR3 SINE MIR -65 143 5 198 0 0 0 chr17 64283818 64283840 -25220713 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 367 261 112 22 chr17 64284417 64284551 -25220002 + MIR SINE MIR 50 195 -67 2416 87 0 3 chr17 64284824 64285123 -25219430 - AluSq SINE Alu -15 298 1 2454 83 0 0 chr17 64285128 64285429 -25219124 - AluY SINE Alu -10 301 1 2119 91 7 20 chr17 64285433 64285731 -25218822 - AluSx SINE Alu -18 294 1 281 326 30 30 chr17 64285818 64285953 -25218600 + MIR3 SINE MIR 44 178 -30 1757 167 0 29 chr17 64285966 64286272 -25218281 + AluSx SINE Alu 1 297 -15 2282 108 3 0 chr17 64286531 64286826 -25217727 + AluSg SINE Alu 1 296 -14 862 144 0 0 chr17 64287107 64287225 -25217328 + FLAM_C SINE Alu 1 118 -25 30 0 0 0 chr17 64287225 64287255 -25217298 + AT_rich Low_complexity Low_complexity 1 30 0 346 93 0 0 chr17 64287260 64287303 -25217250 - MER4E LTR ERV1 -72 694 652 443 161 0 35 chr17 64287328 64287415 -25217138 + FLAM_A SINE Alu 47 130 -12 2027 105 32 45 chr17 64287417 64287553 -25217000 + AluSx SINE Alu 3 139 -173 2676 49 0 0 chr17 64287553 64287859 -25216694 + AluY SINE Alu 1 306 -5 2027 105 32 45 chr17 64287859 64288035 -25216518 + AluSx SINE Alu 139 311 -1 2039 146 0 9 chr17 64288043 64288358 -25216195 + AluJb SINE Alu 1 312 0 2186 98 0 0 chr17 64288533 64288809 -25215744 + AluSx SINE Alu 1 276 -36 22 56 0 0 chr17 64288812 64288848 -25215705 + AT_rich Low_complexity Low_complexity 1 36 0 715 93 31 0 chr17 64289023 64289120 -25215433 + HY3 scRNA scRNA 1 100 -1 1926 127 0 0 chr17 64289281 64289541 -25215012 - AluSx SINE Alu -52 260 1 294 182 125 2 chr17 64289639 64289751 -25214802 + L1MD2 LINE L1 5582 5703 -480 1485 214 3 11 chr17 64289761 64290074 -25214479 - AluJb SINE Alu 0 311 1 770 165 0 0 chr17 64290074 64290189 -25214364 - AluJo SINE Alu -177 135 21 2547 21 0 10 chr17 64290189 64290477 -25214076 - AluYa5 SINE Alu -8 303 19 21 0 0 0 chr17 64290483 64290504 -25214049 + AT_rich Low_complexity Low_complexity 1 21 0 270 191 0 0 chr17 64290508 64290558 -25213995 - MER101 LTR ERV1 -63 507 365 1754 234 103 48 chr17 64290559 64290900 -25213653 + L1MD2 LINE L1 5686 6074 -285 2386 85 20 0 chr17 64290900 64291205 -25213348 - AluSx SINE Alu -1 311 1 1754 234 103 48 chr17 64291205 64291445 -25213108 + L1MD2 LINE L1 6074 6299 -60 909 180 0 0 chr17 64291445 64291584 -25212969 - AluJo SINE Alu -148 164 26 2521 71 3 3 chr17 64291757 64292066 -25212487 - AluSp SINE Alu -4 309 1 2243 118 0 3 chr17 64292282 64292586 -25211967 - AluSx SINE Alu -9 303 1 2211 104 17 0 chr17 64292589 64292878 -25211675 - AluSq SINE Alu -19 294 1 2268 96 0 7 chr17 64293134 64293427 -25211126 - AluSx SINE Alu -21 291 1 39 50 0 0 chr17 64293437 64293497 -25211056 + AT_rich Low_complexity Low_complexity 1 60 0 1624 181 11 11 chr17 64293539 64293820 -25210733 + AluJo SINE Alu 1 281 -31 700 142 24 95 chr17 64293854 64293902 -25210651 + L1MB2 LINE L1 5983 6033 -138 1925 131 16 30 chr17 64293902 64294207 -25210346 + AluJb SINE Alu 1 301 -11 700 142 24 95 chr17 64294207 64294327 -25210226 + L1MB2 LINE L1 6033 6139 -32 2328 104 0 3 chr17 64294396 64294693 -25209860 + AluSx SINE Alu 6 301 -11 233 81 0 0 chr17 64294696 64294733 -25209820 + L1MB3 LINE L1 6144 6180 -3 200 217 0 0 chr17 64294906 64294952 -25209601 + (TA)n Simple_repeat Simple_repeat 2 47 0 2179 113 10 0 chr17 64295953 64296253 -25208300 - AluSq SINE Alu -10 303 1 183 229 82 0 chr17 64296357 64296418 -25208135 + MIR SINE MIR 197 262 0 2600 48 0 10 chr17 64296581 64296893 -25207660 + AluY SINE Alu 1 309 -2 752 95 0 2 chr17 64297047 64297300 -25207253 + AluSg SINE Alu 1 305 -5 2229 108 17 0 chr17 64297302 64297599 -25206954 + AluSg SINE Alu 1 302 -8 2109 107 13 3 chr17 64297827 64298125 -25206428 + AluSx SINE Alu 1 301 -11 2161 128 0 16 chr17 64298471 64298784 -25205769 - AluSx SINE Alu -4 308 1 345 62 0 0 chr17 64298964 64299012 -25205541 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 271 294 135 32 chr17 64299447 64299573 -25204980 - MIR3 SINE MIR -9 199 61 324 0 0 0 chr17 64299891 64299927 -25204626 + (TTTTA)n Simple_repeat Simple_repeat 3 38 0 2046 111 32 4 chr17 64299940 64300220 -25204333 - AluSx SINE Alu -24 288 1 186 103 0 0 chr17 64301371 64301400 -25203153 + (TA)n Simple_repeat Simple_repeat 2 30 0 2399 113 0 0 chr17 64301403 64301713 -25202840 - AluSx SINE Alu -2 310 1 32 43 0 0 chr17 64302209 64302255 -25202298 + AT_rich Low_complexity Low_complexity 1 46 0 2209 131 0 0 chr17 64302516 64302822 -25201731 + AluSx SINE Alu 1 306 -6 2340 34 4 0 chr17 64302822 64303087 -25201466 + AluY SINE Alu 40 305 -6 2258 110 0 0 chr17 64303129 64303428 -25201125 - AluSx SINE Alu -13 299 1 1585 149 67 4 chr17 64304817 64305108 -25199445 - AluJb SINE Alu 0 308 1 1911 137 0 60 chr17 64305818 64306133 -25198420 + AluSx SINE Alu 1 296 -16 2334 101 0 3 chr17 64306135 64306441 -25198112 + AluY SINE Alu 1 305 -6 23 92 0 0 chr17 64306740 64306805 -25197748 + AT_rich Low_complexity Low_complexity 1 65 0 917 136 43 6 chr17 64307552 64307714 -25196839 - L1MD2 LINE L1 -13 6346 6179 360 211 0 70 chr17 64307717 64307831 -25196722 - L1ME LINE L1 -297 5824 5719 181 0 0 0 chr17 64308027 64308047 -25196506 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 1771 144 18 7 chr17 64308047 64308325 -25196228 - AluJb SINE Alu -1 300 1 604 168 221 0 chr17 64308327 64308458 -25196095 - AluJb SINE Alu -13 299 140 234 200 0 0 chr17 64308487 64308542 -25196011 + L1MC4 LINE L1 6649 6703 -1339 * 237 203 29 14 chr17 64308514 64308583 -25195970 + L1MCa LINE L1 1995 2064 -4362 * 306 219 0 31 chr17 64308542 64308595 -25195958 - L1MC4 LINE L1 -1339 6703 6651 2417 88 0 3 chr17 64308595 64308901 -25195652 - AluSq SINE Alu -8 305 1 840 115 0 25 chr17 64308907 64309042 -25195511 - FLAM_C SINE Alu -16 127 1 24 0 0 0 chr17 64309254 64309278 -25195275 + AT_rich Low_complexity Low_complexity 1 24 0 708 269 14 32 chr17 64309529 64309748 -25194805 + MLT1K LTR MaLR 361 575 -13 1386 186 4 21 chr17 64309827 64309976 -25194577 - AluJo SINE Alu -26 286 143 2162 105 3 0 chr17 64309976 64310281 -25194272 - AluSx SINE Alu -6 306 1 1386 186 4 21 chr17 64310281 64310410 -25194143 - AluJo SINE Alu -169 143 13 286 169 13 52 chr17 64310558 64310635 -25193918 + MLT1K LTR MaLR 208 281 -307 833 147 0 49 chr17 64310858 64311001 -25193552 + AluJo SINE Alu 2 137 -175 1970 111 28 0 chr17 64311353 64311641 -25192912 - AluSx SINE Alu -16 296 1 1716 107 7 73 chr17 64311652 64311822 -25192731 - AluSx SINE Alu -19 293 148 1757 139 49 0 chr17 64311822 64312109 -25192444 + AluSq SINE Alu 1 301 -12 1716 107 7 73 chr17 64312109 64312227 -25192326 - AluSx SINE Alu -164 148 24 732 96 10 0 chr17 64312596 64312700 -25191853 + AluSq/x SINE Alu 2 106 -207 1876 63 79 0 chr17 64312700 64312953 -25191600 + AluY SINE Alu 19 291 -20 1742 100 96 0 chr17 64312953 64313223 -25191330 + AluSq SINE Alu 1 296 -17 364 301 170 24 chr17 64315317 64315606 -25188947 - L2 LINE L2 -557 2757 2427 810 127 0 0 chr17 64315634 64315744 -25188809 - FLAM_C SINE Alu -32 111 2 2055 107 0 0 chr17 64316038 64316319 -25188234 + AluSx SINE Alu 12 292 -20 1646 69 37 18 chr17 64316445 64316663 -25187890 - MER1B DNA MER1_type 0 339 118 409 335 170 9 chr17 64317339 64317551 -25187002 - MIR SINE MIR -15 247 2 309 310 149 35 chr17 64318235 64318490 -25186063 - L2 LINE L2 -102 3170 2887 194 273 55 0 chr17 64318512 64318567 -25185986 + L2 LINE L2 3214 3271 -1 951 243 45 25 chr17 64318641 64318851 -25185702 - MIR SINE MIR -13 249 32 711 189 47 0 chr17 64318851 64318978 -25185575 - FLAM_C SINE Alu 0 133 1 951 243 45 25 chr17 64318978 64319010 -25185543 - MIR SINE MIR -230 32 2 450 259 97 41 chr17 64319532 64319765 -25184788 - MIR SINE MIR 0 262 7 2437 31 41 0 chr17 64320456 64320750 -25183803 + AluY SINE Alu 1 306 -5 1882 109 15 0 chr17 64321011 64321278 -25183275 + AluSx SINE Alu 37 307 -5 464 224 48 48 chr17 64321278 64321403 -25183150 + MIR SINE MIR 47 171 -91 2145 117 0 0 chr17 64321496 64321794 -25182759 + AluSx SINE Alu 1 298 -14 2156 105 7 0 chr17 64321794 64322089 -25182464 + AluSp SINE Alu 1 298 -15 1441 168 59 21 chr17 64322256 64322542 -25182011 + AluJo SINE Alu 1 297 -15 2045 98 35 0 chr17 64322639 64322925 -25181628 + AluSx SINE Alu 1 296 -16 3073 172 104 33 chr17 64322932 64323218 -25181335 - L1MC2 LINE L1 -7 7765 7501 2157 122 0 0 chr17 64323218 64323530 -25181023 - AluSx SINE Alu 0 312 1 3073 172 104 33 chr17 64323530 64323920 -25180633 - L1MC2 LINE L1 -271 7501 6184 951 204 42 28 chr17 64324109 64324325 -25180228 + MER20 DNA MER1_type 1 219 0 675 195 16 7 chr17 64324428 64324589 -25179964 + MER34B LTR ERV1 9 157 -385 1769 142 0 0 chr17 64324599 64324874 -25179679 - AluJo SINE Alu -29 283 9 932 177 10 134 chr17 64324881 64325086 -25179467 - AluJb SINE Alu -21 291 62 219 36 0 0 chr17 64325086 64325114 -25179439 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2158 89 4 0 chr17 64325114 64325395 -25179158 - AluSp SINE Alu -31 282 1 932 177 10 134 chr17 64325395 64325493 -25179060 - AluJb SINE Alu -248 64 25 1578 145 67 3 chr17 64325530 64325813 -25178740 + AluSx SINE Alu 1 301 -11 362 193 48 0 chr17 64325960 64326043 -25178510 + LTR37B LTR ERV1 199 285 -183 1995 94 9 60 chr17 64326129 64326300 -25178253 - AluSx SINE Alu -9 303 154 270 0 0 0 chr17 64326300 64326330 -25178223 + (TG)n Simple_repeat Simple_repeat 1 30 0 1995 94 9 60 chr17 64326330 64326477 -25178076 - AluSx SINE Alu -158 154 1 358 242 31 23 chr17 64326493 64326621 -25177932 + LTR37B LTR ERV1 338 466 -2 335 247 24 0 chr17 64326621 64326706 -25177847 + L1MC/D LINE L1 5733 5819 -1989 205 273 125 23 chr17 64326711 64326799 -25177754 + L2 LINE L2 3186 3282 -31 451 264 12 37 chr17 64327023 64327186 -25177367 - MLT1H LTR MaLR -344 205 47 219 196 0 0 chr17 64327347 64327359 -25177194 + (TA)n Simple_repeat Simple_repeat 2 13 -39 2090 100 0 7 chr17 64327359 64327649 -25176904 + AluSx SINE Alu 1 288 -24 219 196 0 0 chr17 64327649 64327687 -25176866 + (TA)n Simple_repeat Simple_repeat 12 52 0 296 174 0 0 chr17 64328073 64328119 -25176434 - Alu SINE Alu -256 46 1 1616 175 19 10 chr17 64328128 64328437 -25176116 - AluSx SINE Alu 0 312 1 1925 142 0 3 chr17 64328601 64328912 -25175641 + AluSx SINE Alu 1 310 -2 781 215 45 75 chr17 64329271 64329318 -25175235 + Charlie7 DNA MER1_type 202 249 -2363 2315 62 0 7 chr17 64329318 64329622 -25174931 + AluY SINE Alu 3 304 -7 781 215 45 75 chr17 64329622 64329839 -25174714 + Charlie7 DNA MER1_type 249 458 -2154 2048 105 14 0 chr17 64329840 64330134 -25174419 + AluSx SINE Alu 1 298 -14 2228 97 3 0 chr17 64330134 64330443 -25174110 + AluY SINE Alu 1 310 -1 758 104 0 0 chr17 64330461 64330567 -25173986 - AluSq/x SINE Alu -205 107 2 1312 175 65 45 chr17 64330576 64330868 -25173685 - AluJo SINE Alu -3 299 2 2461 129 59 30 chr17 64331017 64331526 -25173027 - MLT2A2 LTR ERVL -7 547 1 1983 116 7 10 chr17 64331613 64331914 -25172639 - AluSx SINE Alu -12 300 1 355 248 43 51 chr17 64331914 64332000 -25172553 + L2 LINE L2 2466 2552 -762 2816 140 65 6 chr17 64332000 64332479 -25172074 + MER84 LTR ERV1 1 507 0 355 248 43 51 chr17 64332479 64332509 -25172044 + L2 LINE L2 2552 2581 -733 1678 85 8 13 chr17 64332544 64332779 -25171774 + AluSq SINE Alu 3 236 -77 235 224 214 41 chr17 64332989 64333087 -25171466 - L2 LINE L2 -2 3270 3156 345 298 48 0 chr17 64333918 64334022 -25170531 - L2 LINE L2 -1 3312 3204 236 89 111 22 chr17 64334169 64334214 -25170339 - MER58 DNA MER1_type 0 2420 2372 192 247 136 37 chr17 64334557 64334638 -25169915 + MIR3 SINE MIR 81 169 -39 1746 166 53 6 chr17 64335694 64336013 -25168540 + MLT1A1 LTR MaLR 1 334 -31 420 190 0 0 chr17 64336337 64336416 -25168137 - AluJ/FLAM SINE Alu -233 79 1 1791 133 39 3 chr17 64336440 64336726 -25167827 + AluSx SINE Alu 1 296 -16 180 0 0 0 chr17 64336726 64336746 -25167807 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 279 0 0 0 chr17 64336745 64336776 -25167777 + (TG)n Simple_repeat Simple_repeat 2 32 0 404 178 55 0 chr17 64336827 64336900 -25167653 - AluJ/FRAM SINE Alu -16 296 220 543 179 98 18 chr17 64336926 64337038 -25167515 - FLAM_C SINE Alu -21 122 2 1455 133 167 26 chr17 64337426 64337690 -25166863 + AluJo SINE Alu 1 301 -1 1465 163 41 44 chr17 64338044 64338223 -25166330 - AluJo SINE Alu -9 303 124 2321 88 3 0 chr17 64338223 64338529 -25166024 + AluSg SINE Alu 1 307 -3 1465 163 41 44 chr17 64338529 64338644 -25165909 - AluJo SINE Alu -188 124 10 2007 107 7 10 chr17 64338785 64339094 -25165459 + AluSq SINE Alu 1 308 -5 723 144 75 92 chr17 64339156 64339330 -25165223 - MLT1B LTR MaLR -219 171 1 2170 106 0 0 chr17 64339588 64339881 -25164672 - AluSx SINE Alu -19 293 1 249 276 0 53 chr17 64340502 64340578 -25163975 - L2 LINE L2 -867 2447 2376 282 61 0 0 chr17 64340632 64340665 -25163888 + U2 snRNA snRNA 1 33 -155 198 0 0 0 chr17 64341194 64341216 -25163337 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 422 269 104 22 chr17 64341782 64341927 -25162626 + MIR SINE MIR 41 195 -67 2288 87 0 3 chr17 64342200 64342499 -25162054 - AluSq SINE Alu -15 298 1 2234 86 3 3 chr17 64342504 64342805 -25161748 - AluY SINE Alu -10 301 1 1520 177 65 3 chr17 64342914 64343208 -25161345 - AluJo SINE Alu 0 312 1 2106 115 0 7 chr17 64343939 64344243 -25160310 + AluSx SINE Alu 1 302 -10 236 340 104 14 chr17 64347953 64348097 -25156456 - MIR SINE MIR -18 244 88 195 352 48 8 chr17 64348106 64348231 -25156322 - L2 LINE L2 -182 3090 2961 197 274 0 0 chr17 64348516 64348567 -25155986 + L2 LINE L2 3221 3271 -1 1180 105 5 26 chr17 64349586 64349777 -25154776 + AluSg/x SINE Alu 117 303 -9 759 179 0 51 chr17 64349780 64349961 -25154592 + AluJo/FRAM SINE Alu 137 309 0 2081 109 0 0 chr17 64350160 64350454 -25154099 - AluSx SINE Alu -12 300 7 1756 160 0 0 chr17 64350687 64350975 -25153578 - AluJb SINE Alu -11 301 14 2210 117 0 0 chr17 64351024 64351332 -25153221 - AluSx SINE Alu -4 308 1 479 246 54 78 chr17 64351801 64351936 -25152617 - MER5B DNA MER1_type 0 178 41 2017 124 7 0 chr17 64351936 64352242 -25152311 - AluSx SINE Alu -4 308 1 2146 131 0 0 chr17 64352246 64352558 -25151995 - AluSx SINE Alu 0 312 1 479 246 54 78 chr17 64352558 64352584 -25151969 - MER5B DNA MER1_type -140 38 16 1305 97 0 0 chr17 64353230 64353406 -25151147 - AluSg/x SINE Alu -8 302 127 2219 72 3 13 chr17 64353409 64353713 -25150840 - AluY SINE Alu -10 301 1 1994 143 0 0 chr17 64354166 64354466 -25150087 - AluSx SINE Alu -12 300 1 282 309 129 7 chr17 64354787 64354926 -25149627 + L2 LINE L2 3115 3270 -2 720 147 18 0 chr17 64356506 64356615 -25147938 - FLAM_C SINE Alu -26 117 7 2129 112 0 16 chr17 64356634 64356947 -25147606 - AluSx SINE Alu -4 308 1 274 315 43 0 chr17 64356960 64357052 -25147501 - MIR SINE MIR -14 248 153 395 206 20 49 chr17 64357482 64357584 -25146969 - MIR3 SINE MIR 0 208 110 343 284 0 20 chr17 64357704 64357806 -25146747 + MIR3 SINE MIR 85 184 -24 714 259 74 45 chr17 64357857 64357947 -25146606 + MIR SINE MIR 5 91 -171 1905 113 38 3 chr17 64357947 64358113 -25146440 - AluSx SINE Alu -7 305 123 204 40 0 0 chr17 64358113 64358138 -25146415 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1905 113 38 3 chr17 64358138 64358262 -25146291 - AluSx SINE Alu -189 123 5 714 259 74 45 chr17 64358262 64358414 -25146139 + MIR SINE MIR 91 254 -8 281 312 11 11 chr17 64360244 64360337 -25144216 + MIR SINE MIR 23 115 -93 215 194 36 201 chr17 64360362 64360417 -25144136 - L2 LINE L2 -48 3265 3245 1793 166 0 0 chr17 64360417 64360701 -25143852 - AluJb SINE Alu -15 297 14 215 194 36 201 chr17 64360701 64360784 -25143769 - L2 LINE L2 -68 3245 3150 329 342 0 0 chr17 64361017 64361128 -25143425 - L2 LINE L2 -500 2814 2704 342 253 62 119 chr17 64361651 64361771 -25142782 + MER5A DNA MER1_type 5 111 -78 579 256 81 0 chr17 64361771 64361931 -25142622 + MER96 DNA MER1_type 1 173 -2 342 253 62 119 chr17 64361931 64362004 -25142549 + MER5A DNA MER1_type 111 187 -2 707 260 35 15 chr17 64362181 64362381 -25142172 - MIR SINE MIR 0 262 59 2336 58 0 23 chr17 64362381 64362690 -25141863 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 64362692 64362715 -25141838 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 30 chr17 64365204 64365219 -25139334 + AT_rich Low_complexity Low_complexity 1 15 -17 1876 109 40 0 chr17 64365219 64365494 -25139059 - AluSg SINE Alu -24 286 1 22 0 0 30 chr17 64365494 64365511 -25139042 + AT_rich Low_complexity Low_complexity 15 32 0 262 313 125 16 chr17 64366357 64366485 -25138068 - MIR3 SINE MIR 0 208 67 308 305 93 16 chr17 64367074 64367225 -25137328 - MIR SINE MIR -63 145 8 455 239 188 42 chr17 64367226 64367465 -25137088 + L3 LINE CR1 1195 1468 -109 388 238 70 25 chr17 64368238 64368398 -25136155 + MIR SINE MIR 28 195 -13 448 253 58 104 chr17 64368494 64368545 -25136008 + MIR SINE MIR 29 81 -181 2025 117 7 0 chr17 64368545 64368845 -25135708 - AluSx SINE Alu -10 302 1 448 253 58 104 chr17 64368845 64369034 -25135519 + MIR SINE MIR 81 258 -4 1179 131 0 0 chr17 64369124 64369307 -25135246 + AluSq SINE Alu 131 313 0 404 249 111 80 chr17 64370218 64370443 -25134110 - MIR SINE MIR -11 251 20 1984 114 31 3 chr17 64370675 64370964 -25133589 - AluSx SINE Alu -15 297 1 316 238 71 12 chr17 64371355 64371439 -25133114 - L3b LINE CR1 -196 1387 1299 1011 131 51 81 chr17 64371878 64372114 -25132439 + L1MB7 LINE L1 5943 6171 -13 225 0 0 0 chr17 64372184 64372209 -25132344 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 128 3 41 chr17 64372209 64372499 -25132054 - AluSx SINE Alu -33 279 1 502 273 14 74 chr17 64372572 64372597 -25131956 - MIR SINE MIR -50 212 187 2128 107 23 0 chr17 64372597 64372897 -25131656 - AluSx SINE Alu -5 307 1 502 273 14 74 chr17 64372897 64373087 -25131466 - MIR SINE MIR -75 187 10 267 324 59 0 chr17 64373134 64373236 -25131317 - MIR3 SINE MIR -6 202 95 460 302 48 48 chr17 64373386 64373575 -25130978 - MIR SINE MIR -65 197 9 396 250 246 3 chr17 64374797 64375085 -25129468 - Charlie7 DNA MER1_type 0 2612 2255 838 145 0 0 chr17 64375145 64375269 -25129284 - FLAM_C SINE Alu -18 125 2 379 216 62 0 chr17 64375350 64375447 -25129106 - Charlie7 DNA MER1_type -610 2002 1900 32 43 0 0 chr17 64375476 64375522 -25129031 + AT_rich Low_complexity Low_complexity 1 46 0 249 189 57 0 chr17 64375522 64375575 -25128978 - L1ME1 LINE L1 -19 6147 6092 2161 66 84 0 chr17 64375644 64375931 -25128622 + AluY SINE Alu 1 311 0 378 0 0 0 chr17 64375936 64375978 -25128575 + (TA)n Simple_repeat Simple_repeat 2 43 0 1084 205 99 5 chr17 64376129 64376494 -25128059 - L1ME1 LINE L1 -293 5873 5437 442 191 48 29 chr17 64376484 64376589 -25127964 - L1ME1 LINE L1 -988 5158 5052 * 409 226 190 36 chr17 64376802 64377023 -25127530 - Charlie7 DNA MER1_type -2296 316 62 944 219 48 62 chr17 64377442 64377614 -25126939 + L1ME1 LINE L1 5769 5942 -224 1971 114 3 30 chr17 64377614 64377911 -25126642 + AluJo SINE Alu 1 289 -23 944 219 48 62 chr17 64377911 64378145 -25126408 + L1ME1 LINE L1 5942 6161 -5 450 318 102 87 chr17 64378178 64378367 -25126186 - L2 LINE L2 0 3272 3087 1645 162 35 41 chr17 64378367 64378681 -25125872 + AluJo SINE Alu 1 312 0 450 318 102 87 chr17 64378681 64378953 -25125600 - L2 LINE L2 -185 3087 2804 2080 121 7 0 chr17 64379305 64379610 -25124943 + AluSx SINE Alu 1 307 -5 426 336 15 8 chr17 64382082 64382216 -25122337 - MIR SINE MIR -85 177 43 2015 113 0 3 chr17 64382322 64382628 -25121925 - AluSx SINE Alu 0 305 1 785 131 0 0 chr17 64382650 64382757 -25121796 - FLAM_C SINE Alu -25 118 12 496 264 197 14 chr17 64383115 64383323 -25121230 + MIR SINE MIR 7 252 -10 929 147 47 6 chr17 64383569 64383739 -25120814 + L1MC1 LINE L1 6148 6324 -9 2106 117 0 7 chr17 64383942 64384249 -25120304 + AluSx SINE Alu 1 305 -7 288 83 0 0 chr17 64384432 64384468 -25120085 + U2 snRNA snRNA 1 36 -152 2341 76 0 10 chr17 64384834 64385138 -25119415 - AluSg SINE Alu -9 301 1 890 114 8 0 chr17 64385144 64385276 -25119277 - AluSq/x SINE Alu -179 133 1 1289 191 58 34 chr17 64385467 64385761 -25118792 - AluJb SINE Alu -11 301 1 281 91 0 18 chr17 64385789 64385844 -25118709 + (TTTTA)n Simple_repeat Simple_repeat 3 56 0 9985 25 0 151 chr17 64385845 64387405 -25117148 - SVA Other Other -6 1380 57 201 39 0 0 chr17 64387405 64387431 -25117122 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 2251 76 0 10 chr17 64388125 64388426 -25116127 + AluY SINE Alu 3 300 -11 880 230 45 55 chr17 64388566 64388875 -25115678 - L2 LINE L2 -4 3309 3004 2003 117 7 10 chr17 64389072 64389372 -25115181 + AluSx SINE Alu 1 299 -13 34 42 0 0 chr17 64392644 64392692 -25111861 + AT_rich Low_complexity Low_complexity 1 48 0 185 254 36 36 chr17 64394508 64394563 -25109990 - L2 LINE L2 -5 3267 3213 2167 92 0 0 chr17 64394728 64395054 -25109499 - AluSx SINE Alu 0 328 3 1562 196 28 0 chr17 64395214 64395505 -25109048 + AluJb SINE Alu 1 299 -13 204 182 0 0 chr17 64395793 64395826 -25108727 - MIR SINE MIR -112 150 118 1192 161 0 5 chr17 64395878 64396083 -25108470 - AluJb SINE Alu -16 296 93 205 264 0 28 chr17 64396815 64396887 -25107666 + MIR SINE MIR 191 260 -2 261 247 269 11 chr17 64396940 64397033 -25107520 - MIR SINE MIR -52 210 94 816 149 0 97 chr17 64397323 64397518 -25107035 - FRAM SINE Alu 0 176 1 279 0 0 0 chr17 64397753 64397784 -25106769 + (TA)n Simple_repeat Simple_repeat 1 31 0 2131 83 37 0 chr17 64397784 64398084 -25106469 - AluSp SINE Alu -1 312 2 324 290 93 26 chr17 64398160 64398353 -25106200 + MIR SINE MIR 13 218 -44 2013 115 17 0 chr17 64399689 64399984 -25104569 - AluSg SINE Alu -8 302 3 348 252 221 77 chr17 64400034 64400121 -25104432 + MIR SINE MIR 9 82 -180 1526 145 78 28 chr17 64400121 64400403 -25104150 - AluJo SINE Alu -16 296 1 348 252 221 77 chr17 64400403 64400455 -25104098 + MIR SINE MIR 82 125 -137 1977 133 3 7 chr17 64400455 64400749 -25103804 + AluJo SINE Alu 1 293 -19 348 252 221 77 chr17 64400749 64400830 -25103723 + MIR SINE MIR 125 262 0 543 123 0 0 chr17 64400892 64400965 -25103588 + AluSx SINE Alu 1 73 -240 945 104 0 0 chr17 64400967 64401092 -25103461 - AluJo/FLAM SINE Alu -187 125 1 1706 89 0 8 chr17 64401136 64401371 -25103182 + AluSx SINE Alu 80 312 0 1539 93 40 0 chr17 64401453 64401678 -25102875 - L1PA14 LINE L1 0 6161 5928 269 143 442 0 chr17 64401765 64401842 -25102711 - L2 LINE L2 -3 3310 3200 893 169 32 0 chr17 64402098 64402252 -25102301 - FRAM SINE Alu -7 159 1 180 111 0 0 chr17 64403015 64403042 -25101511 + (T)n Simple_repeat Simple_repeat 1 27 0 2533 146 65 84 chr17 64403098 64403154 -25101399 - L1ME1 LINE L1 0 6166 6110 1448 161 58 15 chr17 64403154 64403428 -25101125 + AluJo SINE Alu 5 290 -22 2533 146 65 84 chr17 64403428 64403967 -25100586 - L1ME1 LINE L1 -56 6110 5582 1989 143 3 0 chr17 64403968 64404276 -25100277 + AluSx SINE Alu 1 309 -3 2162 115 0 0 chr17 64404355 64404651 -25099902 + AluSg SINE Alu 1 296 -14 1289 94 0 2 chr17 64404652 64404897 -25099656 + AluSp SINE Alu 2 296 -17 1695 181 0 3 chr17 64405009 64405296 -25099257 - AluJb SINE Alu -26 286 1 502 247 13 40 chr17 64405965 64406027 -25098526 - MIR SINE MIR 0 262 200 1831 140 3 36 chr17 64406027 64406334 -25098219 - AluSx SINE Alu -15 297 1 502 247 13 40 chr17 64406334 64406421 -25098132 - MIR SINE MIR -62 200 117 993 168 0 17 chr17 64406433 64406606 -25097947 - FRAM SINE Alu -6 170 1 424 357 50 50 chr17 64406770 64406793 -25097760 - L2 LINE L2 0 3272 3250 2253 106 0 0 chr17 64406793 64407104 -25097449 + AluSq SINE Alu 1 311 -2 424 357 50 50 chr17 64407104 64407360 -25097193 - L2 LINE L2 -21 3251 2993 186 43 0 0 chr17 64407376 64407399 -25097154 + (TG)n Simple_repeat Simple_repeat 2 24 0 232 351 68 14 chr17 64407509 64407657 -25096896 - L2 LINE L2 -427 2887 2732 181 353 44 64 chr17 64407686 64407890 -25096663 - L2 LINE L2 -571 2743 2544 565 226 128 24 chr17 64407962 64408126 -25096427 + MIR SINE MIR 63 243 -19 1231 270 145 40 chr17 64408389 64408877 -25095676 + L2 LINE L2 2383 2818 -495 3861 96 2 4 chr17 64408877 64409389 -25095164 + MER9 LTR ERVK 1 511 0 1231 270 145 40 chr17 64409389 64409566 -25094987 + L2 LINE L2 2818 2975 -338 1710 182 0 3 chr17 64409566 64409874 -25094679 - AluJb SINE Alu -5 307 1 1231 270 145 40 chr17 64409874 64410023 -25094530 + L2 LINE L2 2975 3295 -18 2254 88 3 16 chr17 64410026 64410343 -25094210 - AluSp SINE Alu 0 313 1 2281 84 3 3 chr17 64410690 64411000 -25093553 + AluSx SINE Alu 1 310 -2 527 289 13 13 chr17 64411194 64411346 -25093207 - MIR SINE MIR -88 174 23 2078 118 0 0 chr17 64411582 64411870 -25092683 + AluSc SINE Alu 1 288 -21 1803 155 3 0 chr17 64412088 64412378 -25092175 - AluJb SINE Alu -21 291 1 674 256 112 40 chr17 64412478 64412755 -25091798 + L2 LINE L2 3010 3306 -7 1845 158 0 10 chr17 64412834 64413138 -25091415 + AluJb SINE Alu 1 301 -11 2166 119 0 0 chr17 64413788 64414098 -25090455 - AluSx SINE Alu -2 310 1 549 325 35 13 chr17 64414415 64414646 -25089907 - MIR SINE MIR -14 248 13 21 0 0 0 chr17 64414790 64414811 -25089742 + AT_rich Low_complexity Low_complexity 1 21 0 2116 96 3 23 chr17 64414863 64415165 -25089388 - AluSx SINE Alu -16 296 1 349 326 98 5 chr17 64416309 64416502 -25088051 - MIR SINE MIR -21 241 31 2401 60 0 0 chr17 64419163 64419461 -25085092 + AluY SINE Alu 1 298 -13 308 305 47 47 chr17 64420974 64421053 -25083500 - L2 LINE L2 0 3272 3191 2022 138 3 3 chr17 64421053 64421364 -25083189 + AluSq SINE Alu 1 311 -2 308 305 47 47 chr17 64421364 64421412 -25083141 - L2 LINE L2 -80 3192 3145 243 210 16 0 chr17 64421434 64421496 -25083057 - MLT1K LTR MaLR -22 566 504 230 98 24 0 chr17 64421540 64421581 -25082972 - MLT1K LTR MaLR -168 420 379 315 0 0 0 chr17 64422168 64422203 -25082350 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 1866 112 30 0 chr17 64422203 64422470 -25082083 - AluSx SINE Alu -29 283 9 2219 100 0 3 chr17 64422818 64423127 -25081426 - AluSg SINE Alu -2 308 1 677 266 25 0 chr17 64423807 64423965 -25080588 + FRAM SINE Alu 2 163 -3 882 339 89 45 chr17 64424094 64424574 -25079979 - L2 LINE L2 -366 2948 2490 1440 184 0 41 chr17 64424574 64424897 -25079656 + AluJb SINE Alu 1 311 0 882 339 89 45 chr17 64424897 64425373 -25079180 - L2 LINE L2 -824 2490 1949 33 0 0 0 chr17 64425604 64425637 -25078916 + AT_rich Low_complexity Low_complexity 1 33 0 1861 105 51 0 chr17 64425637 64425913 -25078640 - AluSg SINE Alu -20 290 1 378 186 20 10 chr17 64426181 64426283 -25078270 + CT-rich Low_complexity Low_complexity 3 105 0 474 104 75 0 chr17 64426295 64426362 -25078191 - AluSx SINE Alu -45 264 193 995 95 0 7 chr17 64426362 64426499 -25078054 - AluSx SINE Alu -176 136 1 252 86 0 0 chr17 64426852 64426887 -25077666 + (A)n Simple_repeat Simple_repeat 1 35 0 352 167 48 0 chr17 64427082 64427166 -25077387 + CT-rich Low_complexity Low_complexity 4 91 0 246 208 0 0 chr17 64427180 64427233 -25077320 + CT-rich Low_complexity Low_complexity 4 56 0 535 227 160 13 chr17 64427564 64427714 -25076839 + MER5A DNA MER1_type 12 183 -6 2837 133 20 28 chr17 64427988 64428205 -25076348 - L1MB3 LINE L1 0 6183 5966 2344 76 0 3 chr17 64428205 64428508 -25076045 - AluY SINE Alu -9 302 1 2837 133 20 28 chr17 64428508 64428794 -25075759 - L1MB3 LINE L1 -217 5966 5684 234 116 0 0 chr17 64428908 64428951 -25075602 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 186 43 0 0 chr17 64428950 64428973 -25075580 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 786 123 0 18 chr17 64428973 64429087 -25075466 - AluJb SINE Alu -187 125 14 1293 181 59 28 chr17 64429587 64429874 -25074679 - AluJo SINE Alu -16 296 1 2062 138 0 0 chr17 64430827 64431131 -25073422 - AluSx SINE Alu -8 304 1 226 146 83 0 chr17 64431493 64431541 -25073012 - MER5A DNA MER1_type -77 112 61 232 115 0 39 chr17 64431544 64431596 -25072957 + (TTTC)n Simple_repeat Simple_repeat 1 50 0 958 213 0 5 chr17 64431602 64431790 -25072763 - AluJo SINE Alu -2 310 124 748 151 0 24 chr17 64432437 64432563 -25071990 - FLAM_C SINE Alu -7 136 14 1566 159 36 39 chr17 64432680 64432988 -25071565 + AluJo SINE Alu 1 307 -5 339 239 0 0 chr17 64433000 64433067 -25071486 + MIR3 SINE MIR 110 176 -32 680 297 31 35 chr17 64433980 64434239 -25070314 - Charlie8 DNA MER1_type -2141 276 19 1667 151 0 47 chr17 64434548 64434887 -25069666 + AluJo SINE Alu 1 325 0 1256 125 227 12 chr17 64434887 64435143 -25069410 + AluYa5 SINE Alu 1 311 0 28 29 0 0 chr17 64435143 64435178 -25069375 + AT_rich Low_complexity Low_complexity 1 35 0 1957 150 0 0 chr17 64435211 64435518 -25069035 - AluSx SINE Alu -5 307 1 1033 197 21 5 chr17 64435518 64435706 -25068847 - MER58A DNA MER1_type -31 193 3 1875 130 13 3 chr17 64435851 64436151 -25068402 - AluJb SINE Alu -9 303 1 1054 138 0 0 chr17 64436236 64436396 -25068157 + AluJb SINE Alu 147 306 -6 1852 141 13 16 chr17 64436398 64436711 -25067842 + AluSx SINE Alu 1 312 0 330 26 0 0 chr17 64436834 64436873 -25067680 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1985 107 0 4 chr17 64436875 64437156 -25067397 - AluY SINE Alu -30 281 2 542 307 49 45 chr17 64437196 64437460 -25067093 + MLT1J LTR MaLR 237 501 -10 23 0 0 53 chr17 64437819 64437838 -25066715 + AT_rich Low_complexity Low_complexity 1 19 -17 1963 140 3 0 chr17 64437838 64438146 -25066407 + AluJb SINE Alu 1 309 -3 23 0 0 53 chr17 64438146 64438164 -25066389 + AT_rich Low_complexity Low_complexity 19 36 0 2095 118 0 0 chr17 64438186 64438483 -25066070 - AluSx SINE Alu -15 297 1 1716 253 140 57 chr17 64438566 64438856 -25065697 + L1MC4 LINE L1 6961 7226 -816 2117 100 0 27 chr17 64438856 64439157 -25065396 + AluSx SINE Alu 1 293 -19 1716 253 140 57 chr17 64439157 64439732 -25064821 + L1MC4 LINE L1 7226 7922 -120 2124 80 21 3 chr17 64439732 64440020 -25064533 + AluSg SINE Alu 1 293 -17 1716 253 140 57 chr17 64440020 64440152 -25064401 + L1MC4 LINE L1 7922 8042 0 446 250 24 92 chr17 64440255 64440419 -25064134 - L2 LINE L2 -3 3310 3158 719 175 0 0 chr17 64440726 64440840 -25063713 + MER81 DNA DNA 1 114 0 297 323 0 30 chr17 64440840 64440928 -25063625 + MIR SINE MIR 65 151 -111 1788 143 21 75 chr17 64440943 64441020 -25063533 + L1MB7 LINE L1 5833 5913 -271 2164 107 0 10 chr17 64441020 64441330 -25063223 - AluSx SINE Alu -5 307 1 1788 143 21 75 chr17 64441330 64441624 -25062929 + L1MB7 LINE L1 5913 6184 0 3089 130 20 55 chr17 64441631 64441648 -25062905 + L1MB8 LINE L1 5602 5618 -560 1993 174 57 41 chr17 64441648 64442067 -25062486 + MSTB LTR MaLR 1 426 0 3089 130 20 55 chr17 64442067 64442171 -25062382 + L1MB8 LINE L1 5618 5724 -454 1497 171 16 66 chr17 64442171 64442332 -25062221 - AluJo SINE Alu -23 289 148 2171 114 0 0 chr17 64442332 64442631 -25061922 - AluSx SINE Alu -13 299 1 1497 171 16 66 chr17 64442631 64442773 -25061780 - AluJo SINE Alu -164 148 1 3089 130 20 55 chr17 64442773 64443248 -25061305 + L1MB8 LINE L1 5724 6178 0 22 56 0 0 chr17 64443255 64443291 -25061262 + AT_rich Low_complexity Low_complexity 1 36 0 260 377 0 0 chr17 64443345 64443422 -25061131 + L2 LINE L2 3104 3180 -92 1011 149 0 0 chr17 64443440 64443594 -25060959 + FRAM SINE Alu 1 152 -24 827 164 0 14 chr17 64443622 64443762 -25060791 + FLAM_C SINE Alu 2 139 -4 728 214 22 60 chr17 64443786 64443968 -25060585 + MER45A DNA AcHobo 4 178 0 230 328 16 0 chr17 64443971 64444032 -25060521 + L2 LINE L2 3235 3296 -17 237 279 38 0 chr17 64444078 64444157 -25060396 - L2 LINE L2 -9 3263 3182 2440 74 0 0 chr17 64444473 64444782 -25059771 - AluSq SINE Alu -4 309 1 287 183 0 0 chr17 64444824 64444884 -25059669 - Alu SINE Alu 0 302 243 1657 178 7 3 chr17 64444939 64445237 -25059316 - AluJo SINE Alu -11 301 3 2153 117 7 0 chr17 64445250 64445558 -25058995 - AluSx SINE Alu -2 310 1 2377 65 0 10 chr17 64445688 64445998 -25058555 - AluY SINE Alu -4 307 1 671 204 8 0 chr17 64445998 64446130 -25058423 - FLAM_A SINE Alu 0 133 1 359 279 97 32 chr17 64446140 64446294 -25058259 + MIR SINE MIR 74 237 -25 2380 86 0 3 chr17 64446319 64446633 -25057920 + AluSq SINE Alu 1 313 0 231 295 0 16 chr17 64447031 64447092 -25057461 + MIR SINE MIR 18 77 -185 1781 175 28 23 chr17 64447141 64447495 -25057058 - MLT1A1 LTR MaLR 0 365 10 1819 156 0 10 chr17 64447811 64448125 -25056428 + AluJb SINE Alu 1 311 -1 2281 107 0 0 chr17 64449095 64449404 -25055149 + AluSx SINE Alu 1 309 -3 572 245 139 98 chr17 64449405 64449572 -25054981 - L2 LINE L2 -84 3229 3070 233 69 0 0 chr17 64449572 64449601 -25054952 + Alu SINE Alu 12 40 -263 572 245 139 98 chr17 64449601 64449772 -25054781 - L2 LINE L2 -243 3070 2848 404 215 42 42 chr17 64449817 64449961 -25054592 + MER69 DNA AcHobo 1481 1624 -902 2054 113 0 0 chr17 64449983 64450295 -25054258 + AluSg SINE Alu 1 312 0 2081 195 70 62 chr17 64450304 64450846 -25053707 + MER69 DNA AcHobo 1585 2121 -405 2248 70 3 3 chr17 64450846 64451167 -25053386 + AluSp SINE Alu 1 321 0 2081 195 70 62 chr17 64451167 64451245 -25053308 + MER69 DNA AcHobo 2121 2197 -329 1582 129 0 25 chr17 64451245 64451486 -25053067 + AluJo SINE Alu 1 235 -77 2081 195 70 62 chr17 64451486 64451592 -25052961 + MER69 DNA AcHobo 2197 2319 -207 793 150 0 16 chr17 64451603 64451730 -25052823 + FLAM_C SINE Alu 2 126 -17 543 152 23 184 chr17 64451768 64451878 -25052675 + MER69 DNA AcHobo 2311 2437 -89 1777 178 0 3 chr17 64451878 64452187 -25052366 - AluJo SINE Alu -4 308 1 543 152 23 184 chr17 64452187 64452225 -25052328 + MER69 DNA AcHobo 2437 2479 -47 2214 105 3 13 chr17 64452225 64452540 -25052013 + AluSx SINE Alu 1 312 0 543 152 23 184 chr17 64452540 64452646 -25051907 + MER69 DNA AcHobo 2479 2525 -1 452 241 18 27 chr17 64452679 64452791 -25051762 - L2 LINE L2 -528 2786 2676 1878 138 7 0 chr17 64453306 64453684 -25050869 - AluSx SINE Alu 0 380 1 1682 161 0 45 chr17 64453975 64454285 -25050268 + AluJb SINE Alu 1 296 -16 1636 171 38 0 chr17 64454932 64455224 -25049329 + AluJb SINE Alu 1 303 -9 2107 106 0 35 chr17 64455224 64455534 -25049019 + AluSq SINE Alu 1 300 -13 2114 127 0 0 chr17 64455621 64455929 -25048624 + AluSg SINE Alu 1 308 -2 1414 113 0 0 chr17 64455933 64456128 -25048425 + AluSg/x SINE Alu 102 296 -14 2190 88 16 0 chr17 64456207 64456513 -25048040 + AluSp SINE Alu 1 311 -2 853 143 93 0 chr17 64456726 64456866 -25047687 - FRAM SINE Alu -24 152 1 186 200 111 0 chr17 64456866 64456911 -25047642 - MIR SINE MIR -18 244 195 1421 179 47 30 chr17 64456911 64457212 -25047341 + AluJb SINE Alu 1 306 -6 362 301 10 0 chr17 64457229 64457332 -25047221 - MIR SINE MIR -50 212 109 1995 87 50 0 chr17 64457737 64458014 -25046539 - AluSq SINE Alu -17 296 6 944 166 57 0 chr17 64458328 64458503 -25046050 + MLT1C LTR MaLR 2 186 -281 890 149 0 0 chr17 64458503 64458644 -25045909 + AluJb SINE Alu 1 141 -171 1748 140 3 78 chr17 64458686 64458962 -25045591 + MLT1C LTR MaLR 171 421 -46 2160 92 3 3 chr17 64458962 64459255 -25045298 - AluSg SINE Alu -17 293 1 1748 140 3 78 chr17 64459255 64459299 -25045254 + MLT1C LTR MaLR 421 467 0 248 346 222 0 chr17 64459948 64460110 -25044443 - MIR SINE MIR -17 245 48 426 264 138 25 chr17 64460110 64460269 -25044284 + LTR33 LTR ERVL 2 178 -343 2391 101 0 0 chr17 64460573 64460871 -25043682 - AluSx SINE Alu -14 298 1 484 249 114 93 chr17 64461121 64461296 -25043257 - MER77 LTR ERV1 -4 601 431 181 0 0 0 chr17 64461296 64461316 -25043237 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2351 71 0 0 chr17 64461316 64461599 -25042954 - AluY SINE Alu -28 283 1 484 249 114 93 chr17 64461599 64461724 -25042829 - MER77 LTR ERV1 -173 432 401 1495 147 30 0 chr17 64461759 64461990 -25042563 - Tigger5 DNA MER2_type 0 2323 2086 380 148 16 0 chr17 64462012 64462073 -25042480 - Tigger5 DNA MER2_type -2261 62 1 * 932 244 132 15 chr17 64462073 64462338 -25042215 - MER77 LTR ERV1 -256 349 54 2377 82 3 3 chr17 64462638 64462932 -25041621 + AluSp SINE Alu 1 294 -19 1820 165 26 34 chr17 64462998 64463349 -25041204 - Tigger7 DNA MER2_type -385 348 1 529 254 60 40 chr17 64463591 64463792 -25040761 - MIR SINE MIR -56 206 2 1907 161 10 7 chr17 64464193 64464498 -25040055 - AluJb SINE Alu -2 310 5 2471 43 0 0 chr17 64464512 64464837 -25039716 - AluY SINE Alu 0 325 1 706 264 79 101 chr17 64464840 64464861 -25039692 - HAL1 LINE L1 0 2507 2487 2274 151 3 0 chr17 64464861 64465206 -25039347 + MER7A DNA MER2_type 3 346 0 706 264 79 101 chr17 64465206 64465261 -25039292 - HAL1 LINE L1 -20 2487 2432 2354 80 0 3 chr17 64465261 64465560 -25038993 + AluY SINE Alu 1 298 -13 706 264 79 101 chr17 64465560 64466187 -25038366 - HAL1 LINE L1 -75 2432 1818 2274 111 0 0 chr17 64466479 64466777 -25037776 - AluSx SINE Alu -14 298 1 2067 117 21 3 chr17 64466798 64467088 -25037465 - AluJb SINE Alu -17 295 1 1662 129 15 117 chr17 64467101 64467427 -25037126 - AluJb SINE Alu -9 293 1 1181 209 87 45 chr17 64467429 64467518 -25037035 + L1MC5 LINE L1 7508 7592 -369 2516 79 0 0 chr17 64467518 64467823 -25036730 + AluY SINE Alu 1 305 -6 1181 209 87 45 chr17 64467823 64468134 -25036419 + L1MC5 LINE L1 7592 7925 -36 1369 226 30 108 chr17 64468227 64468738 -25035815 + MLT1H1 LTR MaLR 1 460 -95 1736 172 7 14 chr17 64468738 64469034 -25035519 + AluJb SINE Alu 1 294 -18 1369 226 30 108 chr17 64469034 64469123 -25035430 + MLT1H1 LTR MaLR 460 554 -1 708 205 0 0 chr17 64469291 64469418 -25035135 - FLAM_C SINE Alu -10 133 7 197 200 0 67 chr17 64469541 64469601 -25034952 - L2 LINE L2 0 3272 3217 949 180 0 0 chr17 64470362 64470512 -25034041 + FRAM SINE Alu 2 151 -15 2070 116 14 7 chr17 64470557 64470850 -25033703 + AluSx SINE Alu 5 299 -13 2257 98 3 10 chr17 64470866 64471171 -25033382 + AluSc SINE Alu 1 303 -6 298 275 0 33 chr17 64471230 64471321 -25033232 + L2 LINE L2 2228 2315 -999 293 273 68 45 chr17 64471609 64471741 -25032812 + L1ME4a LINE L1 5460 5594 -527 566 62 0 12 chr17 64471751 64471831 -25032722 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 735 243 100 31 chr17 64471832 64472153 -25032400 + L1ME4a LINE L1 5608 5950 -171 1545 87 198 32 chr17 64472154 64472407 -25032146 - AluSx SINE Alu -17 295 1 1676 175 0 38 chr17 64472425 64472717 -25031836 - AluJo SINE Alu -30 282 2 1621 182 10 36 chr17 64472733 64473035 -25031518 - AluJb SINE Alu -18 294 1 1467 176 92 4 chr17 64473112 64473385 -25031168 + AluJo SINE Alu 1 297 -15 2298 115 0 3 chr17 64473606 64473919 -25030634 - AluSx SINE Alu 0 312 1 482 231 196 40 chr17 64473950 64474175 -25030378 - MIR SINE MIR 0 262 3 277 222 8 3 chr17 64474257 64474326 -25030227 - MIR SINE MIR -98 110 40 1593 154 0 30 chr17 64474793 64475059 -25029494 + AluJb SINE Alu 45 302 -10 1513 110 0 5 chr17 64475094 64475303 -25029250 + AluSq SINE Alu 86 293 -20 26 0 0 0 chr17 64475728 64475754 -25028799 + AT_rich Low_complexity Low_complexity 1 26 0 2437 82 0 19 chr17 64475924 64476239 -25028314 + AluSc SINE Alu 1 309 0 222 37 0 0 chr17 64476545 64476572 -25027981 + (T)n Simple_repeat Simple_repeat 1 27 0 33 25 0 0 chr17 64476789 64476829 -25027724 + AT_rich Low_complexity Low_complexity 1 40 0 2265 135 0 0 chr17 64476967 64477279 -25027274 + AluSx SINE Alu 1 312 0 2355 93 0 3 chr17 64477758 64478060 -25026493 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr17 64479209 64479237 -25025316 + AT_rich Low_complexity Low_complexity 1 28 0 937 273 113 44 chr17 64480992 64481424 -25023129 - MLT1K LTR MaLR -24 564 103 2202 98 0 14 chr17 64481495 64481818 -25022735 + AluSx SINE Alu 1 312 0 1833 142 0 0 chr17 64481830 64482090 -25022463 - AluJb SINE Alu -52 260 1 2229 100 3 29 chr17 64482950 64483259 -25021294 - AluSg SINE Alu -9 301 1 1823 165 11 0 chr17 64483761 64484040 -25020513 + AluJo SINE Alu 1 282 -30 555 285 153 24 chr17 64484242 64484736 -25019817 - L2 LINE L2 -1 3312 2757 2247 104 3 25 chr17 64485148 64485466 -25019087 + AluSx SINE Alu 1 311 -1 2973 13 0 0 chr17 64485849 64486167 -25018386 + AluYb8 SINE Alu 1 318 0 1253 302 73 18 chr17 64486833 64487448 -25017105 + L2 LINE L2 2246 2894 -420 595 207 53 68 chr17 64487538 64487804 -25016749 + L2 LINE L2 2921 3182 -131 2180 118 0 0 chr17 64487987 64488309 -25016244 - AluSx SINE Alu 0 322 1 1037 277 65 47 chr17 64488337 64488767 -25015786 - LTR33 LTR ERVL -38 483 46 2178 132 3 0 chr17 64489456 64489767 -25014786 - AluSx SINE Alu 0 312 1 876 144 8 0 chr17 64489779 64489911 -25014642 - AluJb SINE Alu -179 133 1 2164 116 7 0 chr17 64490496 64490789 -25013764 + AluSx SINE Alu 1 295 -17 7696 67 18 13 chr17 64491774 64493492 -25011061 + SVA Other Other 27 1385 -1 217 118 59 0 chr17 64494577 64494586 -25009967 + (TA)n Simple_repeat Simple_repeat 2 9 -46 1844 165 0 14 chr17 64494586 64494877 -25009676 + AluJb SINE Alu 4 290 -22 217 118 59 0 chr17 64494877 64494918 -25009635 + (TA)n Simple_repeat Simple_repeat 9 55 0 251 234 73 13 chr17 64495134 64495300 -25009253 - MIR SINE MIR -15 247 105 778 324 25 63 chr17 64495345 64495522 -25009031 - LTR16B LTR ERVL 0 464 282 2276 112 3 0 chr17 64495522 64495817 -25008736 + AluSp SINE Alu 1 296 -17 778 324 25 63 chr17 64495817 64496084 -25008469 - LTR16B LTR ERVL -182 282 37 2494 68 0 13 chr17 64496758 64497088 -25007465 - AluSx SINE Alu 0 312 1 3994 285 45 33 chr17 64497133 64498652 -25005901 - HERV16 LTR ERVL -3424 1572 35 443 316 47 14 chr17 64498662 64498928 -25005625 - LTR16B LTR ERVL -23 427 108 610 275 47 34 chr17 64499109 64499345 -25005208 + MIR SINE MIR 15 253 -9 196 260 96 39 chr17 64499450 64499554 -25004999 - MIR SINE MIR -36 226 117 1013 285 31 53 chr17 64499946 64500111 -25004442 + MLT1K LTR MaLR 96 263 -325 1793 158 32 3 chr17 64500111 64500395 -25004158 - AluJb SINE Alu -20 292 1 1013 285 31 53 chr17 64500395 64500639 -25003914 + MLT1K LTR MaLR 263 497 -91 1967 181 112 2 chr17 64500639 64501086 -25003467 + LTR54B LTR ERV1 1 496 -2 1013 285 31 53 chr17 64501086 64501128 -25003425 + MLT1K LTR MaLR 497 538 -50 2220 110 13 0 chr17 64501136 64501436 -25003117 + AluSp SINE Alu 1 304 -9 1816 152 29 60 chr17 64501437 64501785 -25002768 + MER1B DNA MER1_type 1 337 0 1333 255 102 60 chr17 64501841 64501966 -25002587 - L2 LINE L2 -2 3311 3193 2174 109 0 47 chr17 64501966 64502287 -25002266 + AluSx SINE Alu 1 306 -6 1333 255 102 60 chr17 64502287 64502557 -25001996 - L2 LINE L2 -120 3193 2936 1711 209 0 0 chr17 64502557 64502863 -25001690 + AluJo SINE Alu 1 306 -6 1333 255 102 60 chr17 64502863 64503312 -25001241 - L2 LINE L2 -377 2936 2418 327 49 0 0 chr17 64503320 64503361 -25001192 + (TTTTC)n Simple_repeat Simple_repeat 5 45 0 2356 94 7 3 chr17 64503378 64503685 -25000868 - AluSx SINE Alu -4 308 1 460 191 191 8 chr17 64503699 64503830 -25000723 - L2 LINE L2 -976 2338 2184 846 199 0 0 chr17 64503837 64503996 -25000557 + FRAM SINE Alu 11 169 0 612 234 160 45 chr17 64503996 64504265 -25000288 - L2 LINE L2 -1110 2204 1905 527 285 17 17 chr17 64504269 64504448 -25000105 + L2 LINE L2 3127 3305 -8 2173 102 3 23 chr17 64504459 64504762 -24999791 + AluSx SINE Alu 1 297 -15 2276 84 17 7 chr17 64504790 64505086 -24999467 + AluSq SINE Alu 1 299 -14 183 234 0 47 chr17 64505210 64505274 -24999279 + MIR SINE MIR 94 154 -108 2153 123 10 0 chr17 64505640 64505941 -24998612 + AluSx SINE Alu 1 304 -8 2247 99 0 0 chr17 64505958 64506276 -24998277 - AluSx SINE Alu 0 318 1 1885 159 3 0 chr17 64507183 64507484 -24997069 - AluJb SINE Alu -10 302 1 366 294 29 22 chr17 64507632 64507768 -24996785 - MIR SINE MIR -12 250 114 1877 183 0 0 chr17 64507874 64508175 -24996378 + AluJb SINE Alu 2 302 -10 210 257 122 0 chr17 64508204 64508278 -24996275 - L2 LINE L2 -1 3312 3230 2262 102 0 29 chr17 64508470 64508785 -24995768 - AluSc SINE Alu -3 306 1 237 319 14 0 chr17 64508876 64508948 -24995605 - L2 LINE L2 -180 3092 3020 257 189 32 21 chr17 64509213 64509308 -24995245 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 1888 127 65 0 chr17 64509316 64509592 -24994961 - AluJb SINE Alu -18 294 1 2362 94 0 0 chr17 64509955 64510253 -24994300 + AluSg SINE Alu 1 298 -12 191 305 137 8 chr17 64510482 64510613 -24993940 + L2 LINE L2 3160 3307 -6 2462 61 0 3 chr17 64511051 64511347 -24993206 + AluSg1 SINE Alu 1 295 -14 197 258 13 159 chr17 64512156 64512203 -24992350 - MER5B DNA MER1_type 0 178 126 2342 113 3 0 chr17 64512203 64512514 -24992039 - AluSp SINE Alu -1 312 1 197 258 13 159 chr17 64512514 64512617 -24991936 - MER5B DNA MER1_type -52 126 50 4069 150 21 10 chr17 64512626 64513305 -24991248 - L1MB3 LINE L1 0 6183 5498 1627 181 3 21 chr17 64513414 64513701 -24990852 - AluJo SINE Alu -30 282 1 488 244 15 42 chr17 64514251 64514473 -24990080 + MER90 LTR ERV1 41 293 -321 2316 82 7 3 chr17 64514511 64514802 -24989751 + AluSc SINE Alu 1 292 -17 21 0 0 0 chr17 64515183 64515204 -24989349 + AT_rich Low_complexity Low_complexity 1 21 0 2331 114 0 0 chr17 64515869 64516176 -24988377 + AluSx SINE Alu 1 307 -5 683 239 0 0 chr17 64516359 64516493 -24988060 - MER63A DNA MER1_type 0 210 77 897 149 0 0 chr17 64516513 64516634 -24987919 + FLAM_C SINE Alu 2 122 -11 350 175 79 0 chr17 64516641 64516704 -24987849 - MER63A DNA MER1_type 0 81 14 2231 132 0 0 chr17 64516848 64517158 -24987395 - AluSx SINE Alu -2 310 1 2031 130 13 10 chr17 64517240 64517539 -24987014 + AluSx SINE Alu 3 302 -10 974 294 127 37 chr17 64517683 64518408 -24986145 + HAL1 LINE L1 738 1527 -980 699 218 97 57 chr17 64518896 64519144 -24985409 - MLT1K LTR MaLR -28 560 303 2047 141 0 7 chr17 64519930 64520229 -24984324 - AluJb SINE Alu -15 297 1 2238 99 0 0 chr17 64520818 64521162 -24983391 - AluSx SINE Alu 0 362 19 1298 151 9 5 chr17 64521187 64521399 -24983154 - AluJb SINE Alu -14 298 86 1923 137 28 0 chr17 64521818 64522103 -24982450 - AluSx SINE Alu -19 293 1 381 196 168 132 chr17 64522219 64522499 -24982054 + MLT1K LTR MaLR 299 588 0 2028 139 7 0 chr17 64522528 64522823 -24981730 + AluSx SINE Alu 1 297 -15 247 281 80 107 chr17 64523586 64523810 -24980743 + L2 LINE L2 2913 3130 -183 30 0 0 0 chr17 64524294 64524324 -24980229 + AT_rich Low_complexity Low_complexity 1 30 0 2314 73 6 16 chr17 64524338 64524652 -24979901 - AluY SINE Alu 0 311 1 1888 129 40 0 chr17 64524654 64524926 -24979627 - AluSq SINE Alu -30 283 1 327 288 16 40 chr17 64525037 64525162 -24979391 + L2 LINE L2 3192 3313 0 2246 96 0 3 chr17 64525499 64525791 -24978762 + AluSp SINE Alu 1 291 -22 2139 145 3 0 chr17 64525859 64526170 -24978383 - AluSx SINE Alu 0 312 1 1887 143 0 29 chr17 64526546 64526853 -24977700 + AluJb SINE Alu 1 298 -14 218 217 14 0 chr17 64526873 64526942 -24977611 + (TA)n Simple_repeat Simple_repeat 1 70 0 494 162 100 53 chr17 64527214 64527343 -24977210 - LTR23 LTR ERV1 0 445 331 2262 76 3 28 chr17 64527343 64527679 -24976874 - AluSp SINE Alu 0 313 1 494 162 100 53 chr17 64527679 64527755 -24976798 - LTR23 LTR ERV1 -114 331 260 633 125 0 0 chr17 64527756 64527852 -24976701 - AluSg/x SINE Alu 0 312 217 1264 146 31 83 chr17 64527852 64528140 -24976413 - LTR56 LTR ERV1 -172 273 1 2342 104 0 0 chr17 64528164 64528473 -24976080 - AluSq SINE Alu -4 309 1 1371 148 0 13 chr17 64528565 64528794 -24975759 + AluJb SINE Alu 87 312 0 704 265 97 65 chr17 64529241 64529379 -24975174 - L1ME4a LINE L1 0 6121 5989 945 193 72 0 chr17 64529379 64529545 -24975008 + MER45A DNA AcHobo 1 178 0 704 265 97 65 chr17 64529545 64529682 -24974871 - L1ME4a LINE L1 -132 5989 5858 1221 76 0 0 chr17 64529682 64529826 -24974727 - U4 snRNA snRNA -1 144 1 704 265 97 65 chr17 64529826 64530293 -24974260 - L1ME4a LINE L1 -263 5858 5354 582 344 25 49 chr17 64530341 64530626 -24973927 + L2 LINE L2 2814 3091 -181 1007 81 0 38 chr17 64530642 64530827 -24973726 + (TTC)n Simple_repeat Simple_repeat 3 180 0 486 172 0 25 chr17 64530828 64530950 -24973603 + CT-rich Low_complexity Low_complexity 3 121 0 1632 141 22 4 chr17 64530958 64531228 -24973325 - L1MD3 LINE L1 -14 7981 7707 194 244 42 193 chr17 64531272 64531391 -24973162 + L2 LINE L2 3142 3242 -30 186 71 0 0 chr17 64531715 64531743 -24972810 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 2106 115 7 0 chr17 64531744 64532032 -24972521 - AluSq SINE Alu -23 290 1 1840 125 12 0 chr17 64532059 64532315 -24972238 + AluSx SINE Alu 1 259 -53 492 273 73 54 chr17 64532445 64532567 -24971986 + L2 LINE L2 2574 2703 -611 2658 51 0 0 chr17 64532567 64532878 -24971675 - AluY SINE Alu 0 311 1 492 273 73 54 chr17 64532878 64532960 -24971593 + L2 LINE L2 2703 2782 -532 1798 152 17 14 chr17 64533009 64533305 -24971248 - AluJo SINE Alu -10 302 6 311 306 33 58 chr17 64533349 64533470 -24971083 + L2 LINE L2 3154 3271 -1 711 263 9 24 chr17 64534471 64534684 -24969869 + L2 LINE L2 3104 3313 0 1729 117 95 4 chr17 64535003 64535277 -24969276 + AluSg SINE Alu 1 299 -11 570 262 153 32 chr17 64536039 64536177 -24968376 - L2 LINE L2 0 3313 3193 2312 102 0 0 chr17 64536177 64536471 -24968082 + AluSx SINE Alu 1 294 -18 570 262 153 32 chr17 64536471 64536614 -24967939 - L2 LINE L2 -120 3193 2998 759 116 26 116 chr17 64536864 64536957 -24967596 - FLAM_C SINE Alu -170 142 67 1470 87 5 73 chr17 64536957 64537176 -24967377 + AluY SINE Alu 91 294 -17 759 116 26 116 chr17 64537176 64537237 -24967316 - FLAM_C SINE Alu -245 67 2 782 137 0 86 chr17 64537332 64537471 -24967082 - FLAM_A SINE Alu -6 127 1 2144 117 4 0 chr17 64537584 64537865 -24966688 - AluSp SINE Alu -31 282 1 21 0 0 0 chr17 64537866 64537887 -24966666 + AT_rich Low_complexity Low_complexity 1 21 0 200 236 149 93 chr17 64537892 64538001 -24966552 + MIR SINE MIR 90 213 -49 1994 115 14 0 chr17 64538001 64538310 -24966243 + AluJb SINE Alu 3 315 0 200 236 149 93 chr17 64538310 64538360 -24966193 + MIR SINE MIR 213 259 -3 255 190 33 130 chr17 64538500 64538552 -24966001 - L1MA10 LINE L1 0 6334 6283 846 239 69 0 chr17 64538552 64538740 -24965813 - L1ME1 LINE L1 -12 6154 5954 2165 59 0 4 chr17 64538788 64539058 -24965495 - AluY SINE Alu -12 299 31 25 0 0 0 chr17 64539339 64539364 -24965189 + AT_rich Low_complexity Low_complexity 1 25 0 286 118 53 92 chr17 64539411 64539487 -24965066 - L1ME3A LINE L1 -5 6165 6093 1791 163 14 14 chr17 64540394 64540706 -24963847 + AluJo SINE Alu 1 312 0 728 274 92 98 chr17 64540903 64541260 -24963293 - MER34 LTR ERV1 -2 540 186 2146 110 17 0 chr17 64541260 64541559 -24962994 - AluSx SINE Alu -8 304 1 728 274 92 98 chr17 64541559 64541744 -24962809 - MER34 LTR ERV1 -356 186 1 21 0 0 0 chr17 64542452 64542473 -24962080 + AT_rich Low_complexity Low_complexity 1 21 0 2347 103 3 0 chr17 64542473 64542785 -24961768 - AluSq SINE Alu 0 313 1 1593 179 13 36 chr17 64542805 64543113 -24961440 - AluJo SINE Alu -11 301 1 530 67 13 0 chr17 64543226 64543301 -24961252 + (TC)n Simple_repeat Simple_repeat 1 76 0 2368 34 0 4 chr17 64543374 64543642 -24960911 - AluY SINE Alu -16 295 29 250 252 163 34 chr17 64543694 64543841 -24960712 - L1MEd LINE L1 -4704 1427 1262 246 116 0 0 chr17 64543864 64543907 -24960646 - Alu SINE Alu 0 301 259 1363 116 0 22 chr17 64543907 64544131 -24960422 + AluY SINE Alu 83 301 -10 281 248 0 88 chr17 64544205 64544318 -24960235 - L1MEd LINE L1 -4930 1189 1087 417 326 23 8 chr17 64544882 64545014 -24959539 + MIR SINE MIR 17 150 -58 2160 123 0 7 chr17 64545140 64545440 -24959113 + AluSx SINE Alu 1 298 -14 2424 70 0 10 chr17 64545590 64545888 -24958665 + AluY SINE Alu 1 295 -16 357 109 0 0 chr17 64545950 64546005 -24958548 + (TG)n Simple_repeat Simple_repeat 2 56 0 293 228 0 59 chr17 64546012 64546113 -24958440 + L1ME1 LINE L1 4957 5051 -1095 1307 164 20 117 chr17 64546114 64546262 -24958291 + AluJo SINE Alu 1 99 -213 1302 28 0 0 chr17 64546262 64546404 -24958149 + L1PA5 LINE L1 6004 6145 -9 1307 164 20 117 chr17 64546404 64546596 -24957957 + AluJo SINE Alu 99 308 -4 1360 187 37 48 chr17 64546605 64547009 -24957544 + L1ME1 LINE L1 5042 5442 -724 2156 191 51 39 chr17 64547009 64547265 -24957288 - MER50 LTR ERV1 0 734 467 2080 114 0 0 chr17 64547265 64547573 -24956980 - AluSc SINE Alu 0 308 1 2156 191 51 39 chr17 64547573 64547807 -24956746 - MER50 LTR ERV1 -267 467 237 471 202 131 0 chr17 64548126 64548225 -24956328 - MER50 LTR ERV1 -613 121 10 3066 218 16 18 chr17 64548231 64548904 -24955649 + L1ME1 LINE L1 5439 6110 -56 2541 33 33 10 chr17 64548972 64549275 -24955278 + AluY SINE Alu 2 311 0 2105 80 59 3 chr17 64549331 64549618 -24954935 + AluSc SINE Alu 1 303 -6 1813 135 7 17 chr17 64550094 64550383 -24954170 - AluSx SINE Alu -18 294 9 3232 80 110 0 chr17 64550417 64550855 -24953698 + LTR19A LTR ERV1 1 486 0 2061 134 0 0 chr17 64550951 64551272 -24953281 + AluSx SINE Alu 1 321 0 305 275 130 7 chr17 64551581 64551719 -24952834 + L2 LINE L2 2929 3083 -189 2468 91 0 0 chr17 64551836 64552144 -24952409 + AluSx SINE Alu 1 308 -4 2066 119 7 7 chr17 64552456 64552759 -24951794 - AluSx SINE Alu -9 303 1 1924 145 0 43 chr17 64553161 64553485 -24951068 - AluJb SINE Alu -2 310 1 1973 128 0 4 chr17 64554603 64554884 -24949669 - AluSx SINE Alu -15 297 18 2041 146 77 70 chr17 64555458 64555528 -24949025 - Tigger2a DNA MER2_type -2274 434 366 2080 130 7 7 chr17 64555528 64555828 -24948725 - AluSx SINE Alu -12 300 1 2041 146 77 70 chr17 64555828 64556188 -24948365 - Tigger2a DNA MER2_type -2342 366 1 2083 123 0 30 chr17 64556595 64556896 -24947657 - AluSx SINE Alu -20 292 1 206 261 149 67 chr17 64557313 64557447 -24947106 - L2 LINE L2 -10 3303 3159 193 205 25 0 chr17 64557518 64557563 -24946990 + MIR SINE MIR 62 108 -100 1244 143 50 57 chr17 64559566 64559971 -24944582 + LTR54 LTR ERV1 2 409 -101 2351 73 0 20 chr17 64559971 64560272 -24944281 + AluY SINE Alu 1 295 -16 2209 103 17 0 chr17 64560279 64560581 -24943972 + AluSg SINE Alu 1 307 -3 1244 143 50 57 chr17 64560581 64560606 -24943947 + LTR54 LTR ERV1 415 510 0 358 171 216 36 chr17 64560714 64560757 -24943796 - MER104 DNA Tc2 -1731 167 133 1751 166 58 15 chr17 64560757 64561082 -24943471 - MER44D DNA MER2_type 0 609 1 358 171 216 36 chr17 64561082 64561149 -24943404 - MER104 DNA Tc2 -1765 133 37 246 95 0 0 chr17 64561164 64561206 -24943347 + (TA)n Simple_repeat Simple_repeat 2 43 0 697 175 0 117 chr17 64561206 64561343 -24943210 - FLAM_A SINE Alu -12 121 1 2156 113 3 0 chr17 64561373 64561696 -24942857 + AluSx SINE Alu 1 324 0 23 0 0 0 chr17 64561832 64561855 -24942698 + AT_rich Low_complexity Low_complexity 1 23 0 1282 102 0 0 chr17 64561858 64562025 -24942528 + AluSg/x SINE Alu 127 293 -17 285 51 0 0 chr17 64562025 64562064 -24942489 + (TA)n Simple_repeat Simple_repeat 1 39 0 1995 118 7 0 chr17 64562090 64562370 -24942183 + AluSp SINE Alu 1 282 -31 444 78 92 7 chr17 64562372 64562643 -24941910 + (TA)n Simple_repeat Simple_repeat 1 294 0 31 26 0 0 chr17 64562653 64562691 -24941862 + AT_rich Low_complexity Low_complexity 1 38 0 1028 150 12 0 chr17 64563010 64563177 -24941376 - AluJb SINE Alu -11 301 133 1492 134 49 67 chr17 64563414 64563502 -24941051 - L1MB4 LINE L1 -2 6178 6090 2406 81 3 0 chr17 64563502 64563800 -24940753 + AluSp SINE Alu 1 299 -14 1492 134 49 67 chr17 64563800 64563920 -24940633 - L1MB4 LINE L1 -90 6090 5969 1817 116 72 4 chr17 64563920 64564196 -24940357 - AluSg SINE Alu -15 295 1 1492 134 49 67 chr17 64564196 64564330 -24940223 - L1MB4 LINE L1 -211 5969 5841 1849 171 0 0 chr17 64564713 64565005 -24939548 - AluSx SINE Alu -20 292 1 29 0 0 0 chr17 64565567 64565596 -24938957 + AT_rich Low_complexity Low_complexity 1 29 0 1677 156 39 14 chr17 64565667 64565949 -24938604 - AluJo SINE Alu -23 289 1 21 0 0 0 chr17 64567605 64567626 -24936927 + AT_rich Low_complexity Low_complexity 1 21 0 379 242 61 38 chr17 64567838 64567970 -24936583 - L1ME3A LINE L1 -5 6165 6031 1986 128 0 45 chr17 64568218 64568530 -24936023 - AluSq SINE Alu -15 298 1 2364 80 0 0 chr17 64569194 64569495 -24935058 - AluY SINE Alu -10 301 1 990 182 24 18 chr17 64569908 64570078 -24934475 - FAM SINE Alu -4 171 1 1115 201 31 9 chr17 64570879 64571103 -24933450 - L1MB5 LINE L1 -1 6173 5945 1476 187 9 111 chr17 64571149 64571729 -24932824 - L1MB5 LINE L1 -226 5948 5444 2450 96 0 0 chr17 64572356 64572668 -24931885 - AluSx SINE Alu 0 312 1 1494 189 25 11 chr17 64572838 64573123 -24931430 + AluJb SINE Alu 1 289 -23 1963 161 0 0 chr17 64573126 64573431 -24931122 + AluSx SINE Alu 1 305 -7 2144 86 53 13 chr17 64573819 64574120 -24930433 + AluSq SINE Alu 1 313 0 206 356 0 0 chr17 64574396 64574455 -24930098 + L3 LINE CR1 194 252 -1325 460 316 48 19 chr17 64574906 64575115 -24929438 + L3 LINE CR1 71 285 -1292 1093 142 0 0 chr17 64575203 64575358 -24929195 - AluSg/x SINE Alu -24 286 132 675 325 145 61 chr17 64575448 64575925 -24928628 + L3 LINE CR1 425 860 -717 2465 65 0 0 chr17 64575925 64576217 -24928336 + AluY SINE Alu 1 292 -19 675 325 145 61 chr17 64576217 64576550 -24928003 + L3 LINE CR1 860 1313 -264 995 192 131 0 chr17 64576550 64576748 -24927805 + MER58A DNA MER1_type 1 224 0 675 325 145 61 chr17 64576748 64576792 -24927761 + L3 LINE CR1 1313 1352 -225 835 197 0 0 chr17 64576832 64576964 -24927589 - FLAM_C SINE Alu -1 132 1 23 0 0 0 chr17 64576967 64576990 -24927563 + AT_rich Low_complexity Low_complexity 1 23 0 528 256 25 44 chr17 64577199 64577402 -24927151 + L1MC4 LINE L1 7748 7946 -96 2297 105 0 0 chr17 64577444 64577740 -24926813 + AluSx SINE Alu 1 296 -16 2202 100 3 3 chr17 64577767 64578058 -24926495 + AluSx SINE Alu 1 291 -21 2394 84 0 13 chr17 64578707 64579016 -24925537 + AluY SINE Alu 1 305 -6 233 351 85 0 chr17 64579055 64579149 -24925404 - L2 LINE L2 -6 3307 3206 1762 153 3 32 chr17 64579204 64579518 -24925035 + AluJb SINE Alu 7 311 -1 1945 138 7 3 chr17 64579548 64579839 -24924714 - AluSq SINE Alu -11 302 11 1688 121 0 0 chr17 64579858 64580082 -24924471 - AluSx SINE Alu -88 224 1 833 153 15 8 chr17 64580424 64580555 -24923998 + AluSq/x SINE Alu 2 133 -179 1062 156 107 0 chr17 64580572 64580777 -24923776 - L1MC2 LINE L1 -7 6337 6111 1315 88 6 0 chr17 64580783 64580954 -24923599 - AluSx SINE Alu -140 172 1 989 212 56 40 chr17 64580957 64581538 -24923015 - L1M4 LINE L1 -841 5305 4611 2459 82 0 0 chr17 64581538 64581843 -24922710 - AluY SINE Alu -6 305 1 989 212 56 40 chr17 64581843 64581965 -24922588 - L1M4 LINE L1 -1535 4611 4493 2065 110 38 0 chr17 64582041 64582332 -24922221 - AluSq SINE Alu -11 302 1 560 42 0 0 chr17 64583187 64583259 -24921294 - AluY SINE Alu -6 303 232 379 287 73 40 chr17 64584306 64584456 -24920097 - MIR3 SINE MIR -31 177 23 2210 117 13 0 chr17 64584484 64584791 -24919762 - AluSx SINE Alu -1 311 1 661 175 92 8 chr17 64584792 64584912 -24919641 - AluJo SINE Alu -178 134 5 1552 161 3 53 chr17 64585049 64585371 -24919182 + AluSx SINE Alu 2 307 -5 303 28 0 0 chr17 64585621 64585657 -24918896 + (TA)n Simple_repeat Simple_repeat 2 37 0 1976 138 0 24 chr17 64587284 64587580 -24916973 - AluSx SINE Alu -23 289 1 857 152 0 8 chr17 64587644 64587776 -24916777 - AluJo SINE Alu -176 136 6 1102 154 45 45 chr17 64587781 64587921 -24916632 - MER3 DNA MER1_type -85 2539 2397 2140 92 3 57 chr17 64587921 64588236 -24916317 - AluSc SINE Alu -11 298 1 1102 154 45 45 chr17 64588236 64588341 -24916212 - MER3 DNA MER1_type -226 2398 2294 775 178 7 22 chr17 64588345 64588480 -24916073 + AluJo SINE Alu 2 134 -178 271 197 33 16 chr17 64588491 64588552 -24916001 - MER3 DNA MER1_type 0 2303 2242 225 110 0 290 chr17 64588564 64588664 -24915889 + MER3 DNA MER1_type 139 209 0 247 222 211 11 chr17 64588672 64588762 -24915791 + MIR SINE MIR 105 212 -50 572 172 0 0 chr17 64589060 64589153 -24915400 + AluJb SINE Alu 203 295 -17 644 167 0 0 chr17 64589431 64589521 -24915032 + FRAM SINE Alu 57 146 -30 361 130 0 0 chr17 64589522 64589576 -24914977 + Alu SINE Alu 245 298 -4 300 263 195 0 chr17 64589578 64589696 -24914857 - MIR SINE MIR -9 253 113 1886 137 38 53 chr17 64589712 64590054 -24914499 - MER1B DNA MER1_type 0 337 1 1771 144 56 0 chr17 64590910 64591195 -24913358 + AluJb SINE Alu 1 301 -11 1217 87 48 14 chr17 64591621 64591828 -24912725 - AluSc SINE Alu -13 296 83 1205 125 31 10 chr17 64592036 64592090 -24912463 + Tigger2 DNA MER2_type 1 52 -2666 2361 101 7 0 chr17 64592090 64592397 -24912156 - AluSp SINE Alu -4 309 1 1205 125 31 10 chr17 64592397 64592534 -24912019 + Tigger2 DNA MER2_type 52 196 -2522 3484 84 25 2 chr17 64592545 64593020 -24911533 - LTR15 LTR ERV1 -7 486 1 652 96 48 0 chr17 64593021 64593125 -24911428 + Tigger2 DNA MER2_type 198 306 -2412 2062 124 10 3 chr17 64593305 64593603 -24910950 + AluSx SINE Alu 6 305 -7 2328 90 3 0 chr17 64593974 64594263 -24910290 + AluSx SINE Alu 5 294 -18 967 190 169 30 chr17 64594284 64594579 -24909974 + MER2 DNA MER2_type 1 336 -9 692 200 107 0 chr17 64594613 64594763 -24909790 + MER58B DNA MER1_type 147 312 -29 273 243 0 27 chr17 64594896 64594970 -24909583 + L1ME LINE L1 5507 5578 -584 234 258 42 67 chr17 64594995 64595115 -24909438 - L1ME LINE L1 -349 5821 5705 226 273 76 0 chr17 64595288 64595354 -24909199 + L1MC4a LINE L1 7282 7352 -456 238 355 0 0 chr17 64595373 64595449 -24909104 - L1ME LINE L1 -2170 5638 5563 1403 180 22 33 chr17 64595457 64595729 -24908824 + AluJb SINE Alu 1 269 -43 23 0 0 0 chr17 64595735 64595758 -24908795 + AT_rich Low_complexity Low_complexity 1 23 0 2017 96 43 7 chr17 64596073 64596355 -24908198 + AluSp SINE Alu 1 292 -21 213 327 65 19 chr17 64596417 64596524 -24908029 + L2 LINE L2 294 405 -2909 1767 215 140 12 chr17 64596828 64597401 -24907152 + L1MC4 LINE L1 7098 7743 -299 2257 80 3 3 chr17 64597584 64597871 -24906682 + AluY SINE Alu 1 287 -24 918 212 6 111 chr17 64598022 64598265 -24906288 - L1MC4 LINE L1 -51 7991 7789 1859 172 0 7 chr17 64598265 64598562 -24905991 - AluJb SINE Alu -17 295 1 918 212 6 111 chr17 64598562 64598643 -24905910 - L1MC4 LINE L1 -253 7789 7701 379 255 0 10 chr17 64598637 64598735 -24905818 - L1MC4 LINE L1 -1593 6449 6353 * 3049 200 44 48 chr17 64598729 64598971 -24905582 - L1ME2 LINE L1 -7 6157 5916 2052 135 0 16 chr17 64598971 64599274 -24905279 - AluSx SINE Alu -14 298 1 3049 200 44 48 chr17 64599274 64599870 -24904683 - L1ME2 LINE L1 -248 5916 5322 2172 100 7 27 chr17 64599873 64600172 -24904381 - AluSx SINE Alu -19 293 1 405 208 10 0 chr17 64600205 64600301 -24904252 - L1M4 LINE L1 -5126 1729 1633 1059 216 52 68 chr17 64600485 64600827 -24903726 - L1M4 LINE L1 -5643 1216 642 1734 160 0 11 chr17 64602049 64602330 -24902223 - AluJb SINE Alu -29 283 6 487 269 76 29 chr17 64602420 64602591 -24901962 - MIR SINE MIR -18 244 66 184 299 39 13 chr17 64603625 64603702 -24900851 + L2 LINE L2 2418 2496 -818 1943 104 4 15 chr17 64603828 64604096 -24900457 - AluSq SINE Alu -48 265 1 1665 141 62 11 chr17 64607312 64607588 -24896965 - AluJb SINE Alu -18 294 5 764 182 188 0 chr17 64608672 64608842 -24895711 + MER3 DNA MER1_type 7 208 -1 248 266 16 0 chr17 64608790 64608854 -24895699 - MER3 DNA MER1_type -108 101 37 * 2171 121 0 0 chr17 64609744 64610041 -24894512 - AluSx SINE Alu -15 297 1 26 0 0 0 chr17 64610391 64610417 -24894136 + AT_rich Low_complexity Low_complexity 1 26 0 1751 139 85 28 chr17 64610565 64610882 -24893671 + MER44D DNA MER2_type 3 607 -2 427 93 0 0 chr17 64611885 64611939 -24892614 - AluSc SINE Alu -20 289 236 2243 96 3 0 chr17 64612137 64612428 -24892125 - AluSx SINE Alu -20 292 1 2143 118 0 3 chr17 64612768 64613064 -24891489 + AluSq SINE Alu 1 295 -18 189 0 0 0 chr17 64613598 64613619 -24890934 + (TA)n Simple_repeat Simple_repeat 1 21 0 360 83 0 0 chr17 64613720 64613768 -24890785 - Alu SINE Alu -255 48 1 788 169 23 0 chr17 64613951 64614081 -24890472 - AluJb SINE Alu -10 302 170 1887 148 10 3 chr17 64613960 64614251 -24890302 - AluJb SINE Alu -19 293 1 3647 153 39 6 chr17 64614356 64615005 -24889548 - L1MB5 LINE L1 -1 6173 5504 206 358 49 0 chr17 64615273 64615354 -24889199 + L2 LINE L2 3227 3311 -2 1617 197 14 3 chr17 64615638 64615933 -24888620 + AluJb SINE Alu 1 298 -14 2486 57 0 0 chr17 64616034 64616331 -24888222 + AluY SINE Alu 1 297 -14 896 117 0 0 chr17 64616479 64616607 -24887946 + AluSg/x SINE Alu 170 297 -13 2369 96 0 7 chr17 64617156 64617457 -24887096 + AluSx SINE Alu 1 299 -13 1678 183 0 7 chr17 64617868 64618158 -24886395 - AluJo SINE Alu -24 288 1 699 55 11 0 chr17 64619878 64619969 -24884584 + AluSq SINE Alu 1 92 -221 1091 46 0 0 chr17 64619969 64620099 -24884454 + AluSp/q SINE Alu 168 297 -16 681 117 0 0 chr17 64620396 64620499 -24884054 - AluSg/x SINE Alu -2 307 205 545 137 10 59 chr17 64620500 64620602 -24883951 - AluJ/FLAM SINE Alu -213 99 3 1301 90 9 90 chr17 64620711 64620923 -24883630 - AluSq SINE Alu -10 303 109 1172 199 41 25 chr17 64621636 64621952 -24882601 + L1ME3A LINE L1 5850 6170 0 1822 164 0 43 chr17 64622086 64622177 -24882376 - AluJb SINE Alu -20 292 199 2245 58 24 3 chr17 64622177 64622471 -24882082 + AluY SINE Alu 1 300 -11 1822 164 0 43 chr17 64622471 64622684 -24881869 - AluJb SINE Alu -113 199 1 497 214 44 132 chr17 64624204 64624346 -24880207 - L1ME1 LINE L1 -5 6161 6008 2322 108 0 0 chr17 64624346 64624641 -24879912 - AluSx SINE Alu -17 295 1 497 214 44 132 chr17 64624641 64624730 -24879823 - L1ME1 LINE L1 -158 6008 5963 799 188 102 35 chr17 64624730 64624927 -24879626 + MER6B DNA MER2_type 1 210 0 497 214 44 132 chr17 64624927 64625012 -24879541 - L1ME1 LINE L1 -203 5963 5872 495 154 11 193 chr17 64625045 64625083 -24879470 - L1MB3 LINE L1 -4 6176 6133 1666 160 17 21 chr17 64625083 64625371 -24879182 + AluJo SINE Alu 3 289 -23 495 154 11 193 chr17 64625371 64625545 -24879008 - L1MB3 LINE L1 -47 6133 6024 1755 167 3 20 chr17 64625545 64625844 -24878709 + AluJb SINE Alu 7 300 -12 495 154 11 193 chr17 64625844 64625910 -24878643 - L1MB3 LINE L1 -156 6024 5948 * 3005 236 93 28 chr17 64625893 64626957 -24877596 - L1MEc LINE L1 -5230 1166 34 2402 221 81 20 chr17 64627648 64628804 -24875749 + L1MC4 LINE L1 6516 7900 -142 211 397 46 46 chr17 64628875 64629006 -24875547 - L2 LINE L2 -31 3241 3111 1331 151 0 23 chr17 64630280 64630498 -24874055 + AluJo SINE Alu 83 295 -17 1212 125 16 0 chr17 64630554 64630738 -24873815 - AluSp SINE Alu -2 311 125 2646 49 0 0 chr17 64630982 64631289 -24873264 + AluY SINE Alu 1 307 -4 239 0 0 31 chr17 64632395 64632427 -24872126 + (TA)n Simple_repeat Simple_repeat 1 31 0 595 292 67 11 chr17 64632659 64632837 -24871716 + L2 LINE L2 3080 3267 -5 408 222 102 0 chr17 64633162 64633270 -24871283 - MER44D DNA MER2_type -220 389 1 246 95 0 0 chr17 64633352 64633394 -24871159 + (TA)n Simple_repeat Simple_repeat 2 43 0 653 175 0 117 chr17 64633394 64633531 -24871022 - FLAM_A SINE Alu -12 121 1 2153 113 3 0 chr17 64633561 64633884 -24870669 + AluSx SINE Alu 1 324 0 23 0 0 0 chr17 64634020 64634043 -24870510 + AT_rich Low_complexity Low_complexity 1 23 0 1281 102 0 0 chr17 64634046 64634213 -24870340 + AluSg/x SINE Alu 127 293 -17 285 51 0 0 chr17 64634213 64634252 -24870301 + (TA)n Simple_repeat Simple_repeat 2 40 0 2027 127 7 10 chr17 64634278 64634585 -24869968 + AluSx SINE Alu 1 306 -6 903 158 0 0 chr17 64634812 64634945 -24869608 - FLAM_C SINE Alu -10 133 1 216 0 0 0 chr17 64634957 64634981 -24869572 + (T)n Simple_repeat Simple_repeat 1 24 0 324 0 0 0 chr17 64636092 64636128 -24868425 + (TG)n Simple_repeat Simple_repeat 2 37 0 194 404 98 8 chr17 64636417 64636662 -24867891 + L2 LINE L2 2709 2975 -339 2303 103 6 6 chr17 64637498 64637809 -24866744 - AluSq SINE Alu -2 311 1 198 258 0 0 chr17 64640757 64640819 -24863734 + CT-rich Low_complexity Low_complexity 3 64 0 1853 130 4 4 chr17 64641644 64641914 -24862639 - AluJb SINE Alu -4 308 39 262 196 0 0 chr17 64641994 64642040 -24862513 - MER5B DNA MER1_type -1 177 132 309 232 45 27 chr17 64642060 64642172 -24862381 - LTR67 LTR ERVL -16 541 428 1037 74 0 7 chr17 64643440 64643575 -24860978 - AluSg/x SINE Alu -8 302 169 1542 189 102 68 chr17 64643584 64644174 -24860379 - L1MC3 LINE L1 -1 7784 5624 9422 118 59 31 chr17 64644431 64646112 -24858441 - Tigger1 DNA MER2_type 0 2418 692 2379 53 0 0 chr17 64646112 64646445 -24858108 - AluY SINE Alu 0 333 1 417 141 0 0 chr17 64646446 64646517 -24858036 + (TCTCCC)n Simple_repeat Simple_repeat 4 74 0 1266 189 10 73 chr17 64646522 64646731 -24857822 - AluJo SINE Alu -30 282 96 2255 105 7 0 chr17 64646731 64647025 -24857528 - AluSx SINE Alu -16 296 1 1266 189 10 73 chr17 64647025 64647116 -24857437 - AluJo SINE Alu -216 96 1 2131 116 7 7 chr17 64647127 64647430 -24857123 - AluSx SINE Alu -9 303 1 1954 126 10 10 chr17 64647440 64647733 -24856820 - AluSx SINE Alu -19 293 1 3206 138 100 8 chr17 64647932 64648553 -24856000 - Tigger1 DNA MER2_type -1740 678 1 22 25 0 25 chr17 64649607 64649619 -24854934 + AT_rich Low_complexity Low_complexity 1 12 -27 2246 118 3 0 chr17 64649619 64649924 -24854629 - AluY SINE Alu -5 306 1 22 25 0 25 chr17 64649924 64649951 -24854602 + AT_rich Low_complexity Low_complexity 12 39 0 2288 120 0 3 chr17 64650437 64650746 -24853807 + AluSx SINE Alu 1 308 -4 27 49 0 0 chr17 64650819 64650860 -24853693 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr17 64651003 64651027 -24853526 + AT_rich Low_complexity Low_complexity 1 24 0 2127 120 0 20 chr17 64651033 64651332 -24853221 + AluSx SINE Alu 1 293 -19 879 98 0 0 chr17 64651344 64651456 -24853097 - FLAM_C SINE Alu -31 112 1 185 274 158 21 chr17 64652177 64652272 -24852281 - L2 LINE L2 0 3313 3206 23 0 0 0 chr17 64652531 64652554 -24851999 + AT_rich Low_complexity Low_complexity 1 23 0 2145 93 19 29 chr17 64652554 64652866 -24851687 - AluSg SINE Alu -1 309 1 201 274 0 20 chr17 64652876 64652927 -24851626 - L2 LINE L2 -27 3245 3196 2342 98 0 0 chr17 64654939 64655235 -24849318 + AluSx SINE Alu 2 297 -15 674 184 0 0 chr17 64655910 64656019 -24848534 + FLAM_C SINE Alu 1 109 -34 1923 162 16 7 chr17 64657387 64657696 -24846857 + AluJb SINE Alu 1 312 0 1495 178 19 4 chr17 64658095 64658359 -24846194 + AluJo SINE Alu 39 306 -6 2244 91 3 7 chr17 64658671 64658989 -24845564 + AluSq SINE Alu 1 317 0 192 77 0 0 chr17 64659874 64659900 -24844653 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1302 146 78 0 chr17 64660374 64660593 -24843960 + MER46A DNA MER2_type 1 236 0 1042 146 55 55 chr17 64660694 64660913 -24843640 - MER20 DNA MER1_type 0 219 1 975 181 34 15 chr17 64661086 64661290 -24843263 - MER3 DNA MER1_type -1 208 1 1622 172 52 21 chr17 64661386 64661677 -24842876 + AluJo SINE Alu 5 304 -8 1857 92 11 11 chr17 64663392 64663676 -24840877 - L1PA13 LINE L1 0 6163 5880 228 250 33 0 chr17 64664068 64664128 -24840425 + MIR SINE MIR 77 138 -124 1019 266 197 23 chr17 64664748 64665180 -24839373 + L2 LINE L2 2807 3313 0 1016 189 6 6 chr17 64667009 64667189 -24837364 - AluJo SINE Alu -13 299 120 852 164 66 0 chr17 64669168 64669320 -24835233 + AluJb SINE Alu 137 298 -14 823 189 56 0 chr17 64669793 64669936 -24834617 + FAM SINE Alu 1 151 -34 1834 256 151 52 chr17 64670571 64670942 -24833611 - L1MC4 LINE L1 -124 7918 7585 1294 146 38 4 chr17 64670942 64671182 -24833371 - L1MB5 LINE L1 -12 6162 5915 1834 256 151 52 chr17 64671182 64671827 -24832726 - L1MC4 LINE L1 -457 7585 6774 1607 144 14 18 chr17 64671827 64672104 -24832449 + AluJo SINE Alu 1 276 -36 1834 256 151 52 chr17 64672104 64672234 -24832319 - L1MC4 LINE L1 -1268 6774 6658 270 252 43 0 chr17 64672767 64672882 -24831671 + (TA)n Simple_repeat Simple_repeat 2 121 0 2399 90 3 0 chr17 64672893 64673205 -24831348 + AluSq SINE Alu 1 313 0 21 0 0 0 chr17 64673205 64673226 -24831327 + AT_rich Low_complexity Low_complexity 1 21 0 293 266 0 0 chr17 64673934 64674013 -24830540 + MER34 LTR ERV1 1 79 -463 2007 112 21 0 chr17 64674119 64674404 -24830149 + AluSq SINE Alu 1 291 -22 2069 97 83 0 chr17 64674725 64675014 -24829539 + AluSq SINE Alu 1 313 0 2102 90 10 17 chr17 64679461 64679760 -24824793 + AluY SINE Alu 2 298 -13 24 77 0 0 chr17 64680982 64681034 -24823519 + AT_rich Low_complexity Low_complexity 1 52 0 533 260 130 7 chr17 64684684 64684838 -24819715 - MIR3 SINE MIR 0 208 36 2094 103 0 3 chr17 64686279 64686561 -24817992 + AluSg SINE Alu 1 281 -29 276 30 0 0 chr17 64686569 64686602 -24817951 + (TA)n Simple_repeat Simple_repeat 2 34 0 2181 106 7 0 chr17 64686973 64687256 -24817297 + AluSc SINE Alu 1 285 -24 2024 118 3 10 chr17 64687578 64687874 -24816679 - AluSg SINE Alu -16 294 1 1923 149 0 0 chr17 64688021 64688297 -24816256 + AluSx SINE Alu 1 276 -36 180 0 0 0 chr17 64688297 64688317 -24816236 + (T)n Simple_repeat Simple_repeat 1 20 0 1869 138 10 43 chr17 64690391 64690695 -24813858 + AluSx SINE Alu 3 296 -16 801 166 191 0 chr17 64690703 64690902 -24813651 - Charlie1a DNA MER1_type -1165 290 54 397 188 55 70 chr17 64693519 64693626 -24810927 + MER20B DNA MER1_type 199 303 -480 3702 136 38 38 chr17 64693626 64694371 -24810182 - Tigger5 DNA MER2_type 0 2323 1579 * 4229 166 14 17 chr17 64694367 64695172 -24809381 - Tigger5 DNA MER2_type -1495 828 27 484 282 77 0 chr17 64695233 64695403 -24809150 + MER20B DNA MER1_type 394 576 -207 266 271 29 14 chr17 64695435 64695505 -24809048 + MER91 DNA MER1_type 70 140 0 231 296 46 9 chr17 64696158 64696266 -24808287 - L2 LINE L2 -2178 1136 1025 394 215 0 13 chr17 64696569 64696648 -24807905 - L2 LINE L2 -45 3268 3191 2025 65 47 43 chr17 64696712 64697020 -24807533 - AluY SINE Alu 0 309 1 196 263 182 20 chr17 64697046 64697145 -24807408 - MIR SINE MIR -46 216 102 270 261 153 36 chr17 64697152 64697263 -24807290 - L2 LINE L2 -12 3260 3137 1622 141 30 8 chr17 64697300 64697563 -24806990 - MER1A DNA MER1_type -221 308 40 242 350 70 0 chr17 64697648 64697748 -24806805 - MIR SINE MIR 0 262 156 1769 143 53 42 chr17 64697753 64698036 -24806517 + MER47A DNA MER2_type 6 295 -2028 1517 180 3 43 chr17 64698036 64698341 -24806212 - AluJo SINE Alu -19 293 1 1769 143 53 42 chr17 64698341 64698413 -24806140 + MER47A DNA MER2_type 295 365 -1 365 185 49 12 chr17 64698420 64698501 -24806052 - MIR SINE MIR -109 153 70 2238 110 0 3 chr17 64698523 64698822 -24805731 - AluSq SINE Alu -15 298 1 2178 113 3 0 chr17 64698831 64699124 -24805429 - AluSx SINE Alu -18 294 1 368 285 194 50 chr17 64699162 64699661 -24804892 - L2 LINE L2 -697 2617 2047 2208 101 7 0 chr17 64699807 64700103 -24804450 - AluSx SINE Alu -14 298 1 325 273 38 53 chr17 64700297 64700429 -24804124 - MIR SINE MIR -27 235 106 1414 144 0 48 chr17 64700432 64700682 -24803871 - AluJo SINE Alu -11 301 64 1199 212 28 4 chr17 64700691 64700941 -24803612 + AluJb SINE Alu 43 298 -14 757 96 15 89 chr17 64701371 64701506 -24803047 - FLAM_C SINE Alu -8 125 1 2441 75 3 0 chr17 64701681 64701989 -24802564 - AluSx SINE Alu -3 309 1 226 371 91 29 chr17 64704383 64704558 -24799995 + MIR SINE MIR 30 215 -47 2442 61 0 0 chr17 64704932 64705227 -24799326 + AluY SINE Alu 1 295 -16 300 305 108 72 chr17 64705253 64705420 -24799133 - MIR3 SINE MIR -21 187 15 2379 89 0 6 chr17 64705805 64706119 -24798434 + AluSx SINE Alu 1 312 0 560 255 137 25 chr17 64706952 64707156 -24797397 + MIR SINE MIR 12 238 -24 203 260 178 14 chr17 64707537 64707610 -24796943 - L2 LINE L2 0 3272 3188 1156 316 115 29 chr17 64707673 64708227 -24796326 - L2 LINE L2 -431 2883 2256 1573 38 0 0 chr17 64708227 64708434 -24796119 + L1PA5 LINE L1 5952 6158 0 1156 316 115 29 chr17 64708434 64708564 -24795989 - L2 LINE L2 -1058 2256 2139 842 128 0 0 chr17 64708582 64708699 -24795854 + FLAM_C SINE Alu 1 117 -16 23 33 0 0 chr17 64708700 64708730 -24795823 + AT_rich Low_complexity Low_complexity 1 30 0 2222 126 7 0 chr17 64708777 64709087 -24795466 + AluSx SINE Alu 1 312 0 2559 151 29 0 chr17 64709091 64709502 -24795051 - MSTC LTR MaLR -2 426 4 21 0 0 0 chr17 64709605 64709626 -24794927 + AT_rich Low_complexity Low_complexity 1 21 0 1479 169 13 66 chr17 64709697 64709998 -24794555 - AluJo SINE Alu -27 285 1 989 206 94 55 chr17 64709998 64710251 -24794302 - L1M4 LINE L1 -1316 4830 4589 1780 158 46 30 chr17 64710251 64710618 -24793935 - THE1C LTR MaLR -2 373 1 989 206 94 55 chr17 64710618 64710914 -24793639 - L1M4 LINE L1 -1557 4589 4259 21 0 0 0 chr17 64710989 64711010 -24793543 + AT_rich Low_complexity Low_complexity 1 21 0 230 324 78 28 chr17 64711541 64711720 -24792833 + MIR SINE MIR 9 196 -66 182 286 29 38 chr17 64711808 64711913 -24792640 - MIR3 SINE MIR -21 187 84 2264 81 30 0 chr17 64711989 64712286 -24792267 - AluY SINE Alu -5 306 1 1477 175 0 8 chr17 64712388 64712651 -24791902 - AluSx SINE Alu -3 309 49 518 179 0 0 chr17 64712659 64712737 -24791816 + AluJ/FLAM SINE Alu 6 83 -229 1125 197 5 0 chr17 64712838 64713031 -24791522 - AluJo SINE Alu -118 194 1 31 0 0 0 chr17 64714356 64714387 -24790166 + AT_rich Low_complexity Low_complexity 1 31 0 2241 82 14 0 chr17 64714705 64715009 -24789544 - AluSx SINE Alu 0 308 1 349 272 113 14 chr17 64715332 64715545 -24789008 + L1MA9 LINE L1 6041 6274 -38 1656 111 64 67 chr17 64715568 64715866 -24788687 + AluJo SINE Alu 1 297 -15 2291 105 0 6 chr17 64717675 64717989 -24786564 - AluSx SINE Alu 0 312 1 2015 143 10 16 chr17 64718302 64718616 -24785937 - AluJo SINE Alu 0 312 1 207 0 0 0 chr17 64718868 64718891 -24785662 + (A)n Simple_repeat Simple_repeat 1 23 0 2382 94 0 0 chr17 64719216 64719515 -24785038 + AluSq SINE Alu 1 299 -14 387 281 0 0 chr17 64719805 64719894 -24784659 - L2 LINE L2 0 3313 3225 2197 119 3 0 chr17 64720008 64720303 -24784250 + AluSx SINE Alu 1 296 -16 1778 116 0 34 chr17 64720561 64720828 -24783725 + AluSg SINE Alu 1 258 -52 234 81 0 0 chr17 64720890 64720927 -24783626 + AluSg SINE Alu 260 296 -4 21 0 0 0 chr17 64720927 64720948 -24783605 + AT_rich Low_complexity Low_complexity 1 21 0 667 245 47 43 chr17 64721166 64721399 -24783154 - MIR SINE MIR -1 261 28 1528 60 0 0 chr17 64721601 64721783 -24782770 - AluY SINE Alu -9 302 121 1614 172 119 25 chr17 64721911 64721949 -24782604 + L1MB8 LINE L1 5690 5723 -455 2316 88 14 0 chr17 64721949 64722244 -24782309 - AluSg SINE Alu -11 299 1 1614 172 119 25 chr17 64722244 64722652 -24781901 + L1MB8 LINE L1 5723 6178 0 216 0 0 0 chr17 64722738 64722762 -24781791 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 641 140 0 0 chr17 64722787 64722887 -24781666 - FLAM_C SINE Alu -40 103 4 228 296 0 0 chr17 64723085 64723139 -24781414 - L2 LINE L2 -4 3268 3215 411 295 32 32 chr17 64723489 64723645 -24780908 + MIR SINE MIR 48 203 -59 292 333 36 27 chr17 64723832 64723943 -24780610 - L2 LINE L2 -55 3217 3106 2223 107 0 7 chr17 64724013 64724321 -24780232 + AluY SINE Alu 1 306 -5 301 289 70 18 chr17 64724332 64724446 -24780107 + MIR SINE MIR 92 211 -51 2257 70 0 0 chr17 64724551 64724823 -24779730 - AluY SINE Alu -39 272 1 1534 171 6 93 chr17 64724828 64725162 -24779391 - AluJo SINE Alu -7 305 1 607 193 0 9 chr17 64725530 64725644 -24778909 + FRAM SINE Alu 32 144 -32 225 0 0 0 chr17 64725644 64725669 -24778884 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 228 106 106 21 chr17 64726955 64727002 -24777551 - L2 LINE L2 -12 3260 3210 2287 92 7 3 chr17 64727019 64727313 -24777240 + AluSq SINE Alu 1 295 -18 2362 92 0 0 chr17 64727391 64727686 -24776867 + AluSq SINE Alu 1 295 -18 575 186 51 42 chr17 64727925 64728043 -24776510 + FLAM_C SINE Alu 1 119 -24 324 0 0 0 chr17 64728043 64728079 -24776474 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 1513 159 60 92 chr17 64728118 64728521 -24776032 - MLT1B LTR MaLR 0 390 1 1562 153 0 12 chr17 64728886 64729135 -24775418 + AluSx SINE Alu 1 246 -66 445 179 26 0 chr17 64729137 64729215 -24775338 + AluJb SINE Alu 212 291 -21 376 252 122 7 chr17 64729386 64729525 -24775028 + MIR3 SINE MIR 47 201 -7 441 329 238 35 chr17 64729590 64730269 -24774284 - L2 LINE L2 -1081 2233 1377 2145 130 0 0 chr17 64730269 64730569 -24773984 + AluJb SINE Alu 13 312 0 441 329 238 35 chr17 64730569 64730661 -24773892 - L2 LINE L2 -1937 1377 1305 1740 176 32 0 chr17 64730726 64731004 -24773549 + AluSx SINE Alu 1 287 -25 2449 58 3 10 chr17 64731012 64731325 -24773228 + AluY SINE Alu 1 311 0 1171 109 13 0 chr17 64731328 64731510 -24773043 + AluSg/x SINE Alu 125 308 0 188 222 22 0 chr17 64731510 64731555 -24772998 + L2 LINE L2 3268 3313 0 203 351 61 40 chr17 64731569 64731717 -24772836 - L2 LINE L2 -2116 1198 1048 24 100 0 0 chr17 64732489 64732569 -24771984 + AT_rich Low_complexity Low_complexity 1 80 0 2487 84 0 0 chr17 64732610 64732921 -24771632 - AluSx SINE Alu -1 311 1 711 151 0 24 chr17 64733395 64733521 -24771032 + AluSg/x SINE Alu 179 301 -11 1065 259 12 4 chr17 64733552 64733803 -24770750 - MIR SINE MIR -2 260 8 301 125 42 0 chr17 64734040 64734088 -24770465 - Tigger7 DNA MER2_type -1 2486 2437 967 207 74 32 chr17 64734126 64734247 -24770306 - Tigger7 DNA MER2_type -507 226 91 1623 201 0 22 chr17 64734247 64734565 -24769988 + AluJo SINE Alu 1 311 -1 967 207 74 32 chr17 64734565 64734660 -24769893 - Tigger7 DNA MER2_type -642 91 1 2061 122 0 14 chr17 64734700 64734988 -24769565 - AluSx SINE Alu -7 305 22 2263 84 35 0 chr17 64735928 64736214 -24768339 + AluSx SINE Alu 1 296 -16 442 127 183 0 chr17 64736214 64736285 -24768268 + AluSg/x SINE Alu 134 217 -95 2022 103 0 0 chr17 64736296 64736558 -24767995 + AluSx SINE Alu 38 299 -13 2071 115 21 0 chr17 64736560 64736847 -24767706 + AluSg SINE Alu 3 295 -15 188 317 17 0 chr17 64736921 64736981 -24767572 - MIR SINE MIR -200 62 2 2012 115 4 11 chr17 64737571 64737849 -24766704 - AluSx SINE Alu -16 296 21 2479 69 0 0 chr17 64739240 64739543 -24765010 + AluY SINE Alu 1 303 -8 2487 77 0 6 chr17 64739591 64739903 -24764650 + AluY SINE Alu 1 310 -1 490 253 136 7 chr17 64739961 64740115 -24764438 + MER96 DNA MER1_type 1 174 -1 1794 152 14 4 chr17 64740725 64741002 -24763551 + AluJo SINE Alu 13 292 -20 686 226 14 88 chr17 64741414 64741711 -24762842 - L1MA9 LINE L1 -39 6273 5999 189 0 0 0 chr17 64741993 64742014 -24762539 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1483 184 27 58 chr17 64742023 64742354 -24762199 + AluJo SINE Alu 1 322 0 418 159 0 68 chr17 64742354 64742442 -24762111 - L1MC2 LINE L1 -17 6327 6246 1803 114 5 5 chr17 64742442 64742806 -24761747 + Charlie3 DNA MER1_type 18 2712 0 2611 150 28 21 chr17 64742812 64743344 -24761209 - L1MC2 LINE L1 -93 6251 5716 198 0 0 0 chr17 64743357 64743379 -24761174 + (TC)n Simple_repeat Simple_repeat 2 23 0 221 97 16 48 chr17 64743379 64743441 -24761112 + (TA)n Simple_repeat Simple_repeat 2 61 0 1361 217 27 50 chr17 64743490 64743928 -24760625 - L1M4 LINE L1 -1794 4421 3994 2328 92 0 7 chr17 64743976 64744282 -24760271 + AluSq SINE Alu 1 304 -9 255 154 0 51 chr17 64744292 64744308 -24760245 + GA-rich Low_complexity Low_complexity 3 18 -58 762 128 23 38 chr17 64744308 64744441 -24760112 + FLAM_C SINE Alu 3 133 0 255 154 0 51 chr17 64744441 64744502 -24760051 + GA-rich Low_complexity Low_complexity 18 76 0 299 200 0 0 chr17 64744932 64744987 -24759566 + MLT1I LTR MaLR 100 154 -255 288 182 0 0 chr17 64744986 64745041 -24759512 + MLT1I LTR MaLR 353 407 -2 * 307 287 0 0 chr17 64745044 64745131 -24759422 - MIR SINE MIR -6 256 170 2007 131 0 3 chr17 64745958 64746270 -24758283 - AluSx SINE Alu 0 312 2 504 0 0 0 chr17 64748088 64748144 -24756409 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 1541 153 99 11 chr17 64748709 64748991 -24755562 - AluJb SINE Alu -5 307 1 608 236 158 0 chr17 64749048 64749251 -24755302 - L1MEc LINE L1 -3379 2836 2602 1266 167 137 22 chr17 64749257 64749527 -24755026 + AluJo SINE Alu 2 302 -10 553 180 109 16 chr17 64749534 64749662 -24754891 + AluJ SINE Alu 1 140 -172 1688 174 31 7 chr17 64749662 64749956 -24754597 + AluJb SINE Alu 1 301 -11 1920 119 0 0 chr17 64749984 64750244 -24754309 + AluSx SINE Alu 44 303 -9 1007 252 96 12 chr17 64750244 64750708 -24753845 - L1MEc LINE L1 -3603 2612 2150 288 111 0 0 chr17 64750718 64750772 -24753781 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 990 191 18 0 chr17 64750827 64750995 -24753558 + AluJ SINE Alu 135 305 -7 351 267 18 42 chr17 64750995 64751160 -24753393 - L1MEc LINE L1 -4322 2074 1914 248 276 105 38 chr17 64751218 64751428 -24753125 - L1MEc LINE L1 -4765 1631 1408 2342 110 0 0 chr17 64751459 64751768 -24752785 - AluSc SINE Alu 0 309 1 209 163 0 0 chr17 64751774 64751797 -24752756 + T-rich Low_complexity Low_complexity 3 28 -17 1869 99 4 4 chr17 64751797 64752050 -24752503 - AluSg SINE Alu -57 253 1 209 163 0 0 chr17 64752050 64752069 -24752484 + T-rich Low_complexity Low_complexity 27 45 0 1159 256 48 109 chr17 64752131 64753038 -24751515 - L1MEc LINE L1 -5506 890 39 24 85 0 0 chr17 64753299 64753358 -24751195 + AT_rich Low_complexity Low_complexity 1 59 0 23 33 0 0 chr17 64754240 64754270 -24750283 + AT_rich Low_complexity Low_complexity 1 30 0 756 229 24 38 chr17 64755112 64755183 -24749370 + L1ME1 LINE L1 5955 6026 -140 1617 183 21 10 chr17 64755183 64755473 -24749080 - AluJo SINE Alu -19 293 1 756 229 24 38 chr17 64755473 64755611 -24748942 + L1ME1 LINE L1 6026 6161 -5 25 65 0 0 chr17 64755739 64755785 -24748768 + AT_rich Low_complexity Low_complexity 1 46 0 1735 121 116 129 chr17 64756255 64756695 -24747858 - Tigger2 DNA MER2_type 0 2718 1 29 70 0 0 chr17 64756762 64756819 -24747734 + AT_rich Low_complexity Low_complexity 1 57 0 27 29 0 0 chr17 64756844 64756878 -24747675 + AT_rich Low_complexity Low_complexity 1 34 0 670 125 0 0 chr17 64756916 64757038 -24747515 - AluJb SINE Alu 0 309 188 1906 145 7 0 chr17 64757072 64757368 -24747185 + AluSx SINE Alu 1 298 -14 1840 95 117 7 chr17 64757627 64757901 -24746652 - AluSx SINE Alu -8 304 1 1884 127 55 4 chr17 64758693 64758968 -24745585 + AluSg SINE Alu 1 289 -21 532 94 17 145 chr17 64759140 64759169 -24745384 + L1 LINE L1 4891 4922 -1224 2199 119 0 0 chr17 64759169 64759464 -24745089 + AluSx SINE Alu 1 295 -17 532 94 17 145 chr17 64759464 64759551 -24745002 + L1 LINE L1 4922 4992 -1154 1005 101 0 0 chr17 64759551 64759680 -24744873 + AluSg1 SINE Alu 3 131 -178 1740 165 0 0 chr17 64759687 64759960 -24744593 + AluSx SINE Alu 1 273 -39 2099 96 0 0 chr17 64760060 64760330 -24744223 - AluSc SINE Alu -39 270 1 749 174 0 15 chr17 64760473 64760605 -24743948 - FLAM_A SINE Alu -3 130 1 805 214 36 6 chr17 64761343 64761511 -24743042 + FRAM SINE Alu 3 175 -1 1500 147 9 123 chr17 64761749 64761887 -24742666 - AluJo SINE Alu 0 302 224 1720 149 13 57 chr17 64761887 64762012 -24742541 + AluJb SINE Alu 1 130 -182 2403 70 0 10 chr17 64762012 64762314 -24742239 - AluY SINE Alu -12 299 1 1720 149 13 57 chr17 64762314 64762489 -24742064 + AluJb SINE Alu 130 288 -24 1500 147 9 123 chr17 64762489 64762691 -24741862 - AluJo SINE Alu -78 224 1 1476 211 4 0 chr17 64763029 64763295 -24741258 + AluJo SINE Alu 30 296 -16 32 57 0 0 chr17 64763514 64763567 -24740986 + AT_rich Low_complexity Low_complexity 1 53 0 210 290 130 36 chr17 64763783 64763921 -24740632 + MIR3 SINE MIR 57 207 -1 1006 264 182 45 chr17 64763956 64764600 -24739953 - HAL1 LINE L1 -396 2111 1301 2109 106 0 7 chr17 64764600 64764935 -24739618 + AluSx SINE Alu 1 333 0 1006 264 182 45 chr17 64764935 64765214 -24739339 - HAL1 LINE L1 -1206 1301 1061 511 273 34 85 chr17 64765265 64765332 -24739221 - HAL1 LINE L1 -1630 877 808 2402 67 10 10 chr17 64765332 64765632 -24738921 + AluY SINE Alu 1 300 -11 511 273 34 85 chr17 64765632 64765831 -24738722 - HAL1 LINE L1 -1699 808 631 2310 169 37 0 chr17 64765831 64766234 -24738319 + MER47B DNA MER2_type 1 418 0 511 273 34 85 chr17 64766234 64766318 -24738235 - HAL1 LINE L1 -1876 631 544 396 207 0 0 chr17 64766713 64766795 -24737758 - MLT1G1 LTR MaLR 0 595 514 1106 113 0 7 chr17 64767382 64767532 -24737021 + AluSq/x SINE Alu 2 150 -162 2327 106 0 3 chr17 64767648 64767960 -24736593 - AluSq SINE Alu -2 311 1 24 0 0 0 chr17 64768560 64768584 -24735969 + AT_rich Low_complexity Low_complexity 1 24 0 2230 111 0 0 chr17 64768993 64769281 -24735272 - AluSx SINE Alu -24 288 1 380 287 56 49 chr17 64769281 64769424 -24735129 - L1 LINE L1 -1094 5052 4909 2175 79 24 3 chr17 64769992 64770284 -24734269 + AluY SINE Alu 1 298 -13 488 368 64 12 chr17 64770637 64771042 -24733511 + L2 LINE L2 2362 2787 -527 441 0 0 0 chr17 64771172 64771221 -24733332 + (TG)n Simple_repeat Simple_repeat 1 49 0 212 109 0 65 chr17 64771221 64771267 -24733286 + (GA)n Simple_repeat Simple_repeat 2 44 0 30 27 0 0 chr17 64771936 64771973 -24732580 + AT_rich Low_complexity Low_complexity 1 37 0 2099 134 0 49 chr17 64772471 64772799 -24731754 + AluSx SINE Alu 1 312 0 2168 105 7 0 chr17 64774619 64774904 -24729649 + AluSx SINE Alu 1 287 -25 240 35 0 0 chr17 64774904 64774933 -24729620 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 2065 131 0 0 chr17 64775286 64775592 -24728961 + AluSg SINE Alu 1 306 -4 2177 118 3 10 chr17 64775601 64775914 -24728639 + AluSx SINE Alu 1 311 -1 1745 97 0 0 chr17 64776090 64776318 -24728235 + AluY SINE Alu 1 228 -83 1943 87 102 0 chr17 64776357 64776621 -24727932 + AluSg SINE Alu 1 291 -19 1905 106 47 4 chr17 64777005 64777279 -24727274 + AluSq SINE Alu 21 306 -7 329 335 60 44 chr17 64777524 64777706 -24726847 + MIR SINE MIR 7 191 -71 2072 126 10 3 chr17 64778427 64778720 -24725833 - AluSx SINE Alu -17 295 1 1241 113 0 11 chr17 64778728 64778913 -24725640 - AluSq SINE Alu -2 311 129 2785 26 0 0 chr17 64778918 64779229 -24725324 - AluYa5 SINE Alu 0 311 1 2326 113 0 0 chr17 64779568 64779877 -24724676 - AluSx SINE Alu -3 309 1 24 32 0 0 chr17 64780518 64780549 -24724004 + AT_rich Low_complexity Low_complexity 1 31 0 348 219 0 0 chr17 64781379 64781461 -24723092 + CT-rich Low_complexity Low_complexity 3 84 0 2285 108 0 0 chr17 64782077 64782373 -24722180 + AluSc SINE Alu 3 298 -11 2380 69 24 0 chr17 64782720 64783011 -24721542 + AluSp SINE Alu 1 298 -15 189 0 0 0 chr17 64783399 64783420 -24721133 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2073 121 7 0 chr17 64783420 64783701 -24720852 - AluSg SINE Alu -27 283 1 337 259 160 39 chr17 64783752 64783910 -24720643 - MIR SINE MIR -73 189 15 340 274 116 14 chr17 64783962 64784108 -24720445 - MIR SINE MIR -15 247 87 378 245 75 9 chr17 64784865 64784971 -24719582 + L2 LINE L2 3197 3309 -4 2366 51 3 10 chr17 64784993 64785285 -24719268 + AluY SINE Alu 1 290 -21 1430 67 11 0 chr17 64785933 64786111 -24718442 + AluY SINE Alu 1 180 -131 1957 121 4 21 chr17 64786211 64786492 -24718061 - AluSp SINE Alu -37 276 1 211 225 0 0 chr17 64786759 64786799 -24717754 + (TG)n Simple_repeat Simple_repeat 1 40 0 2243 103 0 0 chr17 64786799 64787091 -24717462 - AluSg SINE Alu -10 300 9 2428 85 0 0 chr17 64787099 64787394 -24717159 - AluY SINE Alu -16 295 1 2306 95 10 0 chr17 64787394 64787690 -24716863 - AluSg SINE Alu -10 300 2 261 0 0 0 chr17 64787691 64787720 -24716833 + (T)n Simple_repeat Simple_repeat 1 29 0 2003 100 82 0 chr17 64788164 64788444 -24716109 - AluSp SINE Alu -10 303 1 229 71 0 143 chr17 64788447 64788503 -24716050 - Alu SINE Alu -171 132 85 210 227 40 80 chr17 64788706 64788781 -24715772 - MIR SINE MIR -94 168 97 252 322 17 26 chr17 64788995 64789110 -24715443 + L2 LINE L2 2953 3066 -247 * 421 326 21 14 chr17 64789104 64789248 -24715305 + L2 LINE L2 3169 3313 0 1452 191 47 155 chr17 64789678 64789874 -24714679 + L1ME3 LINE L1 5559 5775 -387 2089 101 6 32 chr17 64789874 64790190 -24714363 + AluSg SINE Alu 1 308 -2 1452 191 47 155 chr17 64790190 64790416 -24714137 + L1ME3 LINE L1 5775 5883 -279 2088 118 17 7 chr17 64790416 64790712 -24713841 + AluSq SINE Alu 1 299 -14 1452 191 47 155 chr17 64790712 64790965 -24713588 + L1ME3 LINE L1 5883 6162 0 2509 69 3 0 chr17 64791426 64791732 -24712821 + AluSp SINE Alu 1 307 -6 2102 89 64 0 chr17 64792502 64792783 -24711770 + AluSq SINE Alu 1 299 -14 1311 141 108 43 chr17 64793429 64793620 -24710933 + Tigger3(Golem) DNA MER2_type 1 178 -1053 2191 119 0 0 chr17 64793620 64793915 -24710638 + AluSg SINE Alu 1 295 -15 198 0 0 0 chr17 64793915 64793937 -24710616 + (TA)n Simple_repeat Simple_repeat 2 23 0 300 53 0 0 chr17 64793936 64793974 -24710579 + (TG)n Simple_repeat Simple_repeat 1 38 0 1311 141 108 43 chr17 64793937 64794058 -24710495 + Tigger3(Golem) DNA MER2_type 177 295 -936 908 188 0 0 chr17 64794094 64794248 -24710305 - AluJb SINE Alu -39 273 120 216 0 0 0 chr17 64794360 64794384 -24710169 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2077 121 4 0 chr17 64794394 64794708 -24709845 + AluSx SINE Alu 1 315 0 1464 130 8 8 chr17 64794710 64794948 -24709605 + Tigger3(Golem) DNA MER2_type 2791 3028 -1 1050 88 0 0 chr17 64795076 64795212 -24709341 - AluSq SINE Alu -48 265 130 2117 117 7 0 chr17 64795222 64795520 -24709033 - AluSp SINE Alu -13 300 1 28 29 0 0 chr17 64796386 64796421 -24708132 + AT_rich Low_complexity Low_complexity 1 35 0 2013 121 7 16 chr17 64796807 64797113 -24707440 + AluSx SINE Alu 1 303 -9 2096 107 42 3 chr17 64798919 64799208 -24705345 + AluSq SINE Alu 1 300 -13 299 43 0 0 chr17 64799671 64799718 -24704835 - AluSp/q SINE Alu 0 303 257 421 243 163 24 chr17 64800770 64801021 -24703532 - L1MC5 LINE L1 -65 7896 7611 1840 138 11 4 chr17 64801032 64801307 -24703246 - AluSg SINE Alu -7 303 27 263 239 117 76 chr17 64801346 64801610 -24702943 - L1MC5 LINE L1 -530 7431 7157 1356 152 39 26 chr17 64801620 64801850 -24702703 - AluJb SINE Alu -10 302 70 672 134 81 20 chr17 64801885 64802034 -24702519 - L1MC5 LINE L1 -832 7129 6972 1498 194 95 0 chr17 64802052 64802335 -24702218 - AluJo SINE Alu -2 310 1 1623 143 92 4 chr17 64802458 64802731 -24701822 - AluSx SINE Alu -2 310 14 2590 42 0 7 chr17 64802858 64803164 -24701389 - AluY SINE Alu -7 304 1 425 201 164 31 chr17 64803220 64803379 -24701174 - MIR SINE MIR 0 262 83 2138 112 0 26 chr17 64803473 64803776 -24700777 + AluSg SINE Alu 7 301 -9 186 43 0 0 chr17 64803974 64803997 -24700556 + (A)n Simple_repeat Simple_repeat 1 23 0 25 0 0 0 chr17 64804736 64804761 -24699792 + AT_rich Low_complexity Low_complexity 1 25 0 265 188 16 0 chr17 64804794 64804858 -24699695 + L1ME2 LINE L1 6090 6154 -10 2584 56 0 0 chr17 64804858 64805161 -24699392 - AluY SINE Alu -8 303 1 1290 114 0 0 chr17 64805272 64805447 -24699106 + AluSq SINE Alu 129 303 -10 468 0 0 0 chr17 64805578 64805630 -24698923 + (TG)n Simple_repeat Simple_repeat 2 53 0 1259 207 11 40 chr17 64805644 64805919 -24698634 - AluJo SINE Alu -45 267 1 2388 80 0 3 chr17 64806581 64806881 -24697672 - AluSq SINE Alu -14 299 1 403 138 0 69 chr17 64806984 64807071 -24697482 + FAM SINE Alu 105 185 0 218 317 204 34 chr17 64807078 64807179 -24697374 - L2 LINE L2 -1390 1924 1842 2376 78 3 0 chr17 64807179 64807472 -24697081 - AluSg SINE Alu -16 294 1 218 317 204 34 chr17 64807472 64807752 -24696801 - L2 LINE L2 -1472 1842 1478 2363 101 0 7 chr17 64808532 64808839 -24695714 - AluSq SINE Alu -8 305 1 2000 81 103 0 chr17 64808840 64809112 -24695441 - AluSx SINE Alu -12 300 1 21 0 0 0 chr17 64809118 64809139 -24695414 + AT_rich Low_complexity Low_complexity 1 21 0 1729 181 7 20 chr17 64809338 64809637 -24694916 + AluJb SINE Alu 1 295 -17 2011 73 59 4 chr17 64809931 64810239 -24694314 + AluSp SINE Alu 1 323 0 2013 128 32 0 chr17 64810401 64810683 -24693870 - AluSq SINE Alu -16 297 7 1647 158 33 0 chr17 64810744 64811037 -24693516 - AluJo SINE Alu 0 302 1 1746 174 0 16 chr17 64811097 64811401 -24693152 - AluJo SINE Alu -13 299 1 2014 105 0 75 chr17 64811518 64811824 -24692729 + AluSx SINE Alu 1 283 -29 1927 126 0 0 chr17 64812072 64812335 -24692218 + AluSq SINE Alu 1 263 -50 818 219 152 13 chr17 64812455 64812565 -24691988 - MIR SINE MIR 0 262 169 2002 116 34 0 chr17 64812565 64812859 -24691694 + AluSx SINE Alu 1 304 -8 818 219 152 13 chr17 64812859 64812972 -24691581 - MIR SINE MIR -93 169 8 410 107 0 40 chr17 64813474 64813549 -24691004 - L1MB8 LINE L1 0 6178 6107 2116 96 41 34 chr17 64813550 64813843 -24690710 - AluSg SINE Alu -15 295 1 442 157 0 124 chr17 64813845 64813966 -24690587 + L2 LINE L2 2665 2770 -544 1970 133 17 0 chr17 64814184 64814477 -24690076 + AluSx SINE Alu 1 298 -14 1657 209 7 7 chr17 64814551 64814686 -24689867 + AluJo SINE Alu 1 135 -177 2215 115 6 10 chr17 64814686 64814998 -24689555 + AluSp SINE Alu 1 311 -2 1657 209 7 7 chr17 64814998 64815163 -24689390 + AluJo SINE Alu 134 301 -11 1948 105 48 44 chr17 64815584 64815878 -24688675 - AluSg SINE Alu -15 295 1 2307 83 0 10 chr17 64816049 64816384 -24688169 - AluY SINE Alu 0 311 1 285 290 70 35 chr17 64816384 64816573 -24687980 - L1MB8 LINE L1 -1977 5831 5633 738 110 15 44 chr17 64817064 64817200 -24687353 - FLAM_C SINE Alu -1 132 1 185 226 113 0 chr17 64817375 64817428 -24687125 + L2 LINE L2 3255 3313 0 2257 107 0 3 chr17 64818338 64818637 -24685916 - AluSp SINE Alu -15 298 1 2167 114 0 3 chr17 64818761 64819060 -24685493 - AluSq SINE Alu -15 298 1 476 161 0 0 chr17 64819062 64819149 -24685404 - L1MC4 LINE L1 -202 7840 7754 757 141 52 0 chr17 64819155 64819290 -24685263 - L1MC4 LINE L1 -413 7629 7488 2099 112 54 0 chr17 64819442 64819736 -24684817 - AluSq SINE Alu -3 310 1 23 33 0 0 chr17 64819757 64819787 -24684766 + AT_rich Low_complexity Low_complexity 1 30 0 195 227 227 11 chr17 64820961 64821049 -24683504 - MIR SINE MIR -6 256 150 908 129 0 0 chr17 64821522 64821654 -24682899 - FLAM_C SINE Alu -1 132 1 2102 117 30 0 chr17 64821673 64821972 -24682581 - AluSx SINE Alu -4 308 1 260 235 0 12 chr17 64822086 64822167 -24682386 + L1MC5 LINE L1 7127 7206 -755 604 211 174 12 chr17 64822167 64822328 -24682225 - MER20 DNA MER1_type 0 219 33 758 184 154 26 chr17 64822344 64822378 -24682175 + L1MC5 LINE L1 7202 7230 -731 387 0 0 0 chr17 64822378 64822421 -24682132 + (CA)n Simple_repeat Simple_repeat 2 44 0 758 184 154 26 chr17 64822421 64822620 -24681933 + L1MC5 LINE L1 7230 7465 -496 1484 143 7 22 chr17 64822727 64822999 -24681554 - AluSx SINE Alu -44 268 1 1728 166 0 31 chr17 64823096 64823385 -24681168 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr17 64823391 64823414 -24681139 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 229 261 123 0 chr17 64823854 64823919 -24680634 + L2 LINE L2 3241 3313 0 2055 152 0 0 chr17 64824525 64824821 -24679732 + AluJb SINE Alu 1 296 -16 204 40 0 0 chr17 64824822 64824847 -24679706 + (CA)n Simple_repeat Simple_repeat 2 26 0 1718 176 7 26 chr17 64825770 64826077 -24678476 - AluJb SINE Alu -11 301 1 1938 32 0 5 chr17 64826748 64826969 -24677584 - AluY SINE Alu -9 302 83 2409 91 0 0 chr17 64827324 64827622 -24676931 - AluSx SINE Alu -14 298 1 2048 134 0 23 chr17 64827931 64828236 -24676317 - AluSx SINE Alu -14 298 1 2113 124 0 0 chr17 64828393 64828703 -24675850 - AluSg SINE Alu 0 310 1 420 191 0 0 chr17 64828860 64828949 -24675604 - AluSg SINE Alu -220 90 2 2001 162 0 3 chr17 64828982 64829291 -24675262 + AluJb SINE Alu 1 308 -4 344 218 23 0 chr17 64829359 64829446 -24675107 - HAL1 LINE L1 -114 2393 2305 2093 105 24 14 chr17 64829472 64829766 -24674787 + AluSq SINE Alu 1 297 -16 453 191 0 0 chr17 64829796 64829911 -24674642 + (CA)n Simple_repeat Simple_repeat 2 116 0 2049 255 74 38 chr17 64829941 64830148 -24674405 - HAL1 LINE L1 -340 2167 1969 1785 167 3 33 chr17 64830148 64830288 -24674265 + AluJo SINE Alu 4 147 -165 1857 120 27 24 chr17 64830288 64830580 -24673973 + AluY SINE Alu 1 293 -18 1785 167 3 33 chr17 64830580 64830745 -24673808 + AluJo SINE Alu 147 300 -12 2049 255 74 38 chr17 64830745 64831043 -24673510 - HAL1 LINE L1 -538 1969 1626 2216 98 3 14 chr17 64831043 64831340 -24673213 + AluY SINE Alu 1 294 -17 2049 255 74 38 chr17 64831340 64831566 -24672987 - HAL1 LINE L1 -881 1626 1409 195 286 286 0 chr17 64831594 64831685 -24672868 + L2 LINE L2 3189 3305 -8 747 279 142 34 chr17 64831732 64832133 -24672420 - HAL1 LINE L1 -1742 765 310 1890 165 6 37 chr17 64832133 64832454 -24672099 - AluSx SINE Alu -1 311 1 747 279 142 34 chr17 64832454 64832496 -24672057 - HAL1 LINE L1 -2197 310 274 461 270 151 5 chr17 64832513 64832698 -24671855 - HAL1 LINE L1 -2295 212 1 2194 108 3 29 chr17 64833025 64833339 -24671214 - AluSg SINE Alu -4 306 1 1861 142 6 57 chr17 64833496 64833668 -24670885 - AluJo SINE Alu -10 302 123 234 0 0 0 chr17 64833668 64833694 -24670859 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2299 71 4 0 chr17 64833694 64833975 -24670578 - AluSc SINE Alu -27 282 1 1861 142 6 57 chr17 64833975 64834119 -24670434 - AluJo SINE Alu -187 125 1 1757 133 0 70 chr17 64834228 64834529 -24670024 - AluSx SINE Alu -9 303 24 957 151 39 130 chr17 64834637 64834819 -24669734 - L1M4 LINE L1 -713 5465 5268 665 156 62 23 chr17 64834819 64834947 -24669606 - FLAM_C SINE Alu 0 133 1 957 151 39 130 chr17 64834947 64834975 -24669578 - L1M4 LINE L1 -910 5268 5239 2312 85 0 0 chr17 64834975 64835293 -24669260 - AluSg SINE Alu 0 318 1 957 151 39 130 chr17 64835293 64835315 -24669238 - L1M4 LINE L1 -939 5239 5217 2136 113 3 0 chr17 64835315 64835607 -24668946 - AluSx SINE Alu -18 294 2 2296 101 0 0 chr17 64835613 64835909 -24668644 - AluSg SINE Alu -14 296 1 957 151 39 130 chr17 64835909 64835937 -24668616 - L1M4 LINE L1 -966 5212 5183 1759 161 53 3 chr17 64835937 64836222 -24668331 - AluJb SINE Alu -13 299 1 957 151 39 130 chr17 64836222 64836416 -24668137 - L1M4 LINE L1 -995 5183 5016 2307 98 0 3 chr17 64836423 64836720 -24667833 - AluSq SINE Alu -17 296 1 691 204 7 7 chr17 64836732 64836869 -24667684 - FLAM_A SINE Alu -5 137 1 2571 162 16 146 chr17 64836871 64837297 -24667256 - L1M4 LINE L1 -1109 5037 4557 1986 129 11 7 chr17 64837297 64837576 -24666977 - AluSx SINE Alu -32 280 1 2571 162 16 146 chr17 64837576 64837597 -24666956 - L1M4 LINE L1 -1589 4557 4535 2129 129 7 0 chr17 64837597 64837907 -24666646 - AluSx SINE Alu 0 312 1 2468 70 0 10 chr17 64837914 64838216 -24666337 - AluY SINE Alu -10 301 3 2571 162 16 146 chr17 64838216 64838456 -24666097 - L1M4 LINE L1 -1617 4529 4465 1518 173 27 15 chr17 64838456 64838716 -24665837 - AluJb SINE Alu -14 298 36 2571 162 16 146 chr17 64838716 64838852 -24665701 - L1M4 LINE L1 -1681 4465 4313 2301 92 0 26 chr17 64839113 64839417 -24665136 - AluSx SINE Alu -16 296 1 2618 48 0 7 chr17 64839530 64839839 -24664714 - AluY SINE Alu -4 307 1 819 105 0 0 chr17 64839842 64839956 -24664597 - AluSp/q SINE Alu -7 306 193 1267 123 0 0 chr17 64840507 64840678 -24663875 + AluSg/x SINE Alu 123 293 -17 1815 77 126 0 chr17 64840787 64841048 -24663505 + AluSp SINE Alu 1 294 -9 26 30 0 0 chr17 64841470 64841503 -24663050 + AT_rich Low_complexity Low_complexity 1 33 0 200 35 35 0 chr17 64841591 64841620 -24662933 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 813 157 0 0 chr17 64841620 64841741 -24662812 - FLAM_C SINE Alu -22 121 1 2115 127 23 0 chr17 64841750 64842050 -24662503 - AluSg SINE Alu -3 307 1 984 191 47 28 chr17 64842588 64842803 -24661750 - MER20 DNA MER1_type 0 219 1 402 333 15 22 chr17 64842965 64843100 -24661453 + L2 LINE L2 3138 3271 -1 2432 90 0 0 chr17 64843257 64843568 -24660985 - AluY SINE Alu 0 311 1 2255 102 9 22 chr17 64843833 64844148 -24660405 - AluSp SINE Alu -2 311 1 2210 120 3 0 chr17 64844148 64844440 -24660113 - AluSx SINE Alu -19 293 1 2303 104 13 0 chr17 64844625 64844923 -24659630 - AluSx SINE Alu -10 302 1 1171 206 8 42 chr17 64845152 64845414 -24659139 + AluJb SINE Alu 59 311 -1 2157 118 10 3 chr17 64845466 64845763 -24658790 + AluSx SINE Alu 1 299 -13 2271 88 3 10 chr17 64845766 64846061 -24658492 + AluY SINE Alu 1 293 -18 2050 106 46 0 chr17 64846280 64846564 -24657989 + AluSx SINE Alu 1 297 -15 2125 127 0 3 chr17 64846588 64846888 -24657665 + AluSx SINE Alu 1 299 -13 320 80 40 0 chr17 64846889 64846939 -24657614 + Alu SINE Alu 1 52 -249 1388 186 0 13 chr17 64847040 64847276 -24657277 + AluJb SINE Alu 68 300 -12 1254 170 0 5 chr17 64847367 64847567 -24656986 - AluJo SINE Alu -109 203 5 2120 104 18 7 chr17 64848028 64848337 -24656216 + AluSx SINE Alu 1 312 0 2122 95 0 34 chr17 64848373 64848667 -24655886 + AluSx SINE Alu 21 304 -8 617 200 0 44 chr17 64849095 64849230 -24655323 - FLAM_A SINE Alu -4 129 1 219 342 53 44 chr17 64849294 64849408 -24655145 + MIR SINE MIR 66 180 -82 1815 171 0 7 chr17 64851293 64851586 -24652967 + AluJb SINE Alu 11 301 -11 2097 112 10 33 chr17 64851710 64852014 -24652539 - AluSq SINE Alu -16 297 1 3450 173 159 49 chr17 64854459 64854738 -24649815 + L1MC4 LINE L1 6968 7215 -827 1831 99 118 11 chr17 64854738 64855010 -24649543 + AluSg1 SINE Alu 1 301 -8 3450 173 159 49 chr17 64855010 64855487 -24649066 + L1MC4 LINE L1 7215 7638 -404 1973 96 114 11 chr17 64855487 64855768 -24648785 + AluSg SINE Alu 1 310 0 3450 173 159 49 chr17 64855768 64855837 -24648716 + L1MC4 LINE L1 7638 7698 -344 180 111 0 0 chr17 64855837 64855864 -24648689 + (TATG)n Simple_repeat Simple_repeat 2 28 0 3450 173 159 49 chr17 64855864 64855958 -24648595 + L1MC4 LINE L1 7698 7991 -51 2123 95 0 11 chr17 64855975 64856259 -24648294 - AluSg SINE Alu -29 281 1 1310 97 11 0 chr17 64856382 64856557 -24647996 + AluSg/x SINE Alu 127 303 -7 2101 109 55 0 chr17 64856557 64856850 -24647703 + AluSq SINE Alu 1 309 -4 2448 71 0 3 chr17 64857334 64857629 -24646924 + AluY SINE Alu 1 294 -17 1300 201 13 17 chr17 64857639 64857878 -24646675 + AluJo SINE Alu 1 238 -74 2073 131 7 14 chr17 64858185 64858346 -24646207 - AluSx SINE Alu -17 295 134 200 59 29 0 chr17 64858346 64858380 -24646173 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2252 91 0 3 chr17 64858380 64858665 -24645888 - AluSq SINE Alu -29 284 1 2073 131 7 14 chr17 64858665 64858799 -24645754 - AluSx SINE Alu -176 136 1 220 267 0 17 chr17 64858836 64858896 -24645657 + L2 LINE L2 3204 3262 -10 1350 97 6 0 chr17 64858912 64859087 -24645466 - AluSg/x SINE Alu -4 308 133 417 220 0 11 chr17 64859797 64859888 -24644665 - MER5B DNA MER1_type 0 178 89 216 0 0 0 chr17 64859888 64859912 -24644641 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 257 122 0 295 chr17 64860568 64860632 -24643921 - MER5B DNA MER1_type -68 110 29 2035 141 0 14 chr17 64860632 64860929 -24643624 - AluSx SINE Alu -19 293 1 257 122 0 295 chr17 64860929 64860940 -24643613 - MER5B DNA MER1_type -149 29 17 2427 77 0 3 chr17 64860940 64861237 -24643316 - AluSx SINE Alu -16 296 1 257 122 0 295 chr17 64861237 64861288 -24643265 - MER5B DNA MER1_type -161 17 33 2243 120 0 3 chr17 64861288 64861589 -24642964 - AluSx SINE Alu -12 300 1 257 122 0 295 chr17 64861589 64861616 -24642937 - MER5B DNA MER1_type -144 34 1 1253 162 0 144 chr17 64861730 64861866 -24642687 + AluJo SINE Alu 16 170 -142 2133 123 13 13 chr17 64861866 64861998 -24642555 + AluSx SINE Alu 1 132 -180 2114 101 13 26 chr17 64861998 64862305 -24642248 + AluSq SINE Alu 1 303 -10 2133 123 13 13 chr17 64862305 64862473 -24642080 + AluSx SINE Alu 131 301 -11 2112 139 0 0 chr17 64862483 64862786 -24641767 + AluSx SINE Alu 1 303 -9 1253 162 0 144 chr17 64862786 64862965 -24641588 + AluJo SINE Alu 180 295 -17 2233 121 0 10 chr17 64862982 64863295 -24641258 + AluSx SINE Alu 2 311 -1 1467 125 17 66 chr17 64863333 64863358 -24641195 + L1MA4 LINE L1 6005 6030 -270 840 150 16 0 chr17 64863358 64863485 -24641068 + FLAM_C SINE Alu 3 131 -2 1467 125 17 66 chr17 64863485 64863598 -24640955 + L1MA4 LINE L1 6030 6147 -153 2150 104 28 0 chr17 64863598 64863886 -24640667 + AluSq SINE Alu 1 296 -17 1467 125 17 66 chr17 64863886 64864034 -24640519 + L1MA4 LINE L1 6147 6278 -22 1154 58 0 0 chr17 64864136 64864275 -24640278 + MER85 DNA T2_type 1 139 0 2397 95 0 0 chr17 64864756 64865062 -24639491 + AluY SINE Alu 3 308 -3 2280 97 0 3 chr17 64865211 64865501 -24639052 + AluSc SINE Alu 1 289 -20 2109 120 3 3 chr17 64865515 64865815 -24638738 + AluSq SINE Alu 1 300 -13 2101 138 0 3 chr17 64865831 64866136 -24638417 + AluSx SINE Alu 1 304 -8 504 221 26 0 chr17 64866136 64866249 -24638304 - MIR SINE MIR -139 123 8 888 178 101 12 chr17 64866433 64866602 -24637951 + AluJb SINE Alu 107 290 -22 374 155 0 0 chr17 64866614 64866672 -24637881 + AluYb8 SINE Alu 136 193 -115 2112 124 0 0 chr17 64867493 64867777 -24636776 + AluSx SINE Alu 1 308 0 217 0 0 0 chr17 64867777 64867801 -24636752 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 1114 150 236 0 chr17 64868789 64869009 -24635544 - AluJb SINE Alu -30 282 11 23 33 0 0 chr17 64869362 64869392 -24635161 + AT_rich Low_complexity Low_complexity 1 30 0 1490 178 14 27 chr17 64869482 64869775 -24634778 - AluJo SINE Alu -13 299 11 1631 186 11 4 chr17 64869849 64870129 -24634424 - AluJo SINE Alu -30 282 1 180 0 0 0 chr17 64870272 64870292 -24634261 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr17 64870416 64870450 -24634103 + AT_rich Low_complexity Low_complexity 1 34 0 975 145 12 29 chr17 64870533 64870705 -24633848 - FAM SINE Alu -5 170 2 1337 127 104 9 chr17 64870842 64871054 -24633499 - AluSg/x SINE Alu -10 302 71 2103 81 3 60 chr17 64871233 64871570 -24632983 - AluSx SINE Alu 0 320 1 598 165 21 0 chr17 64872065 64872162 -24632391 + FLAM_C SINE Alu 35 133 -10 22 0 0 0 chr17 64872167 64872189 -24632364 + AT_rich Low_complexity Low_complexity 1 22 0 2262 86 36 3 chr17 64872615 64872916 -24631637 - AluSq SINE Alu -2 311 1 1376 107 0 99 chr17 64872919 64873109 -24631444 - AluSg/x SINE Alu -9 301 138 2139 124 3 13 chr17 64873109 64873286 -24631267 - AluSq SINE Alu -2 311 137 2164 121 3 0 chr17 64873286 64873583 -24630970 - AluSx SINE Alu -14 298 1 2139 124 3 13 chr17 64873583 64873719 -24630834 - AluSq SINE Alu -176 137 1 1376 107 0 99 chr17 64873719 64873770 -24630783 - AluSg/x SINE Alu -172 138 84 2382 103 0 0 chr17 64873776 64874086 -24630467 - AluSg SINE Alu 0 310 1 2387 86 3 0 chr17 64874146 64874449 -24630104 - AluSp SINE Alu -9 304 1 244 184 58 0 chr17 64874487 64874574 -24629979 + (TA)n Simple_repeat Simple_repeat 2 93 0 257 100 100 0 chr17 64874710 64874750 -24629803 + HY1 scRNA scRNA 1 44 -68 1546 136 125 7 chr17 64874878 64875157 -24629396 - AluJb SINE Alu 0 312 1 2029 119 0 10 chr17 64875580 64875875 -24628678 + AluSg SINE Alu 1 292 -18 213 39 0 0 chr17 64876765 64876791 -24627762 + (T)n Simple_repeat Simple_repeat 1 26 0 2218 89 16 16 chr17 64877657 64877960 -24626593 - AluSq SINE Alu -10 303 1 189 0 0 0 chr17 64879845 64879866 -24624687 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 2228 78 28 3 chr17 64881064 64881347 -24623206 + AluSx SINE Alu 1 290 -22 755 173 231 0 chr17 64881506 64881679 -24622874 + AluJo SINE Alu 76 288 -24 189 0 0 0 chr17 64882696 64882717 -24621836 + (T)n Simple_repeat Simple_repeat 1 21 0 2391 79 0 16 chr17 64883615 64883920 -24620633 - AluSq SINE Alu -13 300 1 207 0 0 0 chr17 64883920 64883943 -24620610 + (T)n Simple_repeat Simple_repeat 1 23 0 661 131 50 0 chr17 64883943 64884042 -24620511 - U6 snRNA snRNA -3 104 1 183 250 158 40 chr17 64884385 64884461 -24620092 - MIR SINE MIR -16 246 162 2460 50 6 31 chr17 64884624 64884943 -24619610 - AluY SINE Alu 0 311 1 781 143 8 15 chr17 64885142 64885275 -24619278 - FLAM_A SINE Alu 0 133 2 1719 144 0 70 chr17 64885343 64885656 -24618897 - AluJb SINE Alu -21 291 1 1981 143 0 29 chr17 64885869 64886177 -24618376 + AluSx SINE Alu 1 299 -13 865 84 7 63 chr17 64886442 64886585 -24617968 + MER4A LTR ERV1 2 136 -528 2194 109 3 0 chr17 64886588 64886882 -24617671 + AluY SINE Alu 1 295 -16 2131 98 13 22 chr17 64886894 64887209 -24617344 + AluSx SINE Alu 1 312 0 209 161 0 0 chr17 64887212 64887243 -24617310 + polypurine Low_complexity Low_complexity 1 31 0 1896 145 3 16 chr17 64887262 64887398 -24617155 + AluSx SINE Alu 1 137 -175 2388 95 3 0 chr17 64887398 64887702 -24616851 + AluSp SINE Alu 1 305 -8 1896 145 3 16 chr17 64887702 64887875 -24616678 + AluSx SINE Alu 137 306 -6 1867 144 17 14 chr17 64889218 64889509 -24615044 - AluSx SINE Alu -20 292 1 975 127 8 0 chr17 64889509 64889643 -24614910 - AluSq/x SINE Alu -177 135 1 219 243 95 0 chr17 64889902 64889976 -24614577 + L2 LINE L2 3187 3267 -5 2232 99 11 0 chr17 64890239 64890523 -24614030 + AluSp SINE Alu 2 288 -25 2039 160 13 0 chr17 64890575 64890882 -24613671 + AluJb SINE Alu 1 311 -1 1737 167 0 7 chr17 64890887 64891175 -24613378 + AluJb SINE Alu 2 287 -25 1306 136 167 31 chr17 64891188 64891445 -24613108 + AluSg1 SINE Alu 1 292 -17 1649 114 64 67 chr17 64891453 64891623 -24612930 - MER4B LTR ERV1 -269 341 172 2418 66 0 16 chr17 64891623 64891928 -24612625 + AluY SINE Alu 1 300 -11 1649 114 64 67 chr17 64891928 64892099 -24612454 - MER4B LTR ERV1 -438 172 1 330 95 0 0 chr17 64892271 64892313 -24612240 - Alu SINE Alu -256 43 2 276 279 83 64 chr17 64892333 64892558 -24611995 + L1MC4a LINE L1 6313 6545 -1263 2297 110 0 0 chr17 64892558 64892866 -24611687 + AluSg1 SINE Alu 1 308 -1 276 279 83 64 chr17 64892866 64892905 -24611648 + L1MC4a LINE L1 6545 6582 -1226 1267 147 3 127 chr17 64892905 64893204 -24611349 + AluSg1 SINE Alu 33 294 -15 2163 128 10 0 chr17 64893204 64893502 -24611051 + AluSg SINE Alu 1 301 -9 2154 106 45 3 chr17 64893523 64893815 -24610738 + AluSc SINE Alu 1 304 -5 410 220 79 45 chr17 64893847 64894024 -24610529 + L1MC4a LINE L1 7057 7239 -569 2234 110 0 0 chr17 64894026 64894326 -24610227 + AluSx SINE Alu 1 300 -12 252 281 21 10 chr17 64894326 64894415 -24610138 + L1MC4 LINE L1 7808 7900 -142 2028 149 3 0 chr17 64895369 64895665 -24608888 + AluSx SINE Alu 1 297 -15 1670 109 0 0 chr17 64896049 64896260 -24608293 + AluSq SINE Alu 1 211 -102 227 312 213 22 chr17 64896565 64896889 -24607664 + HAL1 LINE L1 318 703 -1804 837 145 0 15 chr17 64896900 64897031 -24607522 - AluSq SINE Alu -19 294 166 678 109 0 0 chr17 64897031 64897123 -24607430 - AluSq SINE Alu -219 93 2 2113 228 94 102 chr17 64897192 64897278 -24607275 + HAL1 LINE L1 780 865 -1642 1759 141 4 0 chr17 64897278 64897540 -24607013 + AluSx SINE Alu 43 305 -7 2113 228 94 102 chr17 64897540 64897697 -24606856 + HAL1 LINE L1 865 1022 -1485 2154 123 0 16 chr17 64897697 64898014 -24606539 + AluSx SINE Alu 1 312 0 2113 228 94 102 chr17 64898014 64898140 -24606413 + HAL1 LINE L1 1022 1148 -1359 2360 79 7 0 chr17 64898140 64898430 -24606123 + AluSp SINE Alu 1 292 -21 2113 228 94 102 chr17 64898430 64898635 -24605918 + HAL1 LINE L1 1148 1353 -1154 1562 193 7 10 chr17 64898635 64898931 -24605622 + AluJo SINE Alu 1 295 -17 2113 228 94 102 chr17 64898931 64898951 -24605602 + HAL1 LINE L1 1353 1372 -1135 1640 142 42 48 chr17 64898951 64899240 -24605313 + AluJo SINE Alu 1 287 -25 2113 228 94 102 chr17 64899240 64899905 -24604648 + HAL1 LINE L1 1372 2033 -474 2116 117 3 0 chr17 64899973 64900263 -24604290 + AluSx SINE Alu 2 292 -20 2404 79 30 0 chr17 64900295 64900598 -24603955 + AluSp SINE Alu 1 312 -1 2184 120 0 0 chr17 64900608 64900899 -24603654 + AluSx SINE Alu 1 291 -21 2283 104 0 3 chr17 64901086 64901395 -24603158 + AluY SINE Alu 2 309 -2 706 228 0 0 chr17 64901399 64901526 -24603027 - FLAM_A SINE Alu -6 127 1 264 114 0 0 chr17 64901589 64901624 -24602929 + U2 snRNA snRNA 1 35 -153 22 35 0 0 chr17 64902034 64902063 -24602490 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 64902124 64902152 -24602401 + AT_rich Low_complexity Low_complexity 1 28 0 441 200 0 0 chr17 64902257 64902332 -24602221 - MER2 DNA MER2_type -3 342 268 2303 110 0 0 chr17 64902370 64902679 -24601874 + AluSx SINE Alu 1 309 -3 674 188 9 0 chr17 64902681 64902793 -24601760 - MER2 DNA MER2_type -211 134 22 222 250 0 0 chr17 64903325 64903373 -24601180 - L2 LINE L2 0 3272 3225 21 57 0 0 chr17 64903903 64903938 -24600615 + AT_rich Low_complexity Low_complexity 1 35 0 1456 111 0 73 chr17 64904479 64904610 -24599943 + AluSx SINE Alu 5 113 -199 1738 97 4 0 chr17 64904610 64904837 -24599716 + AluSq SINE Alu 85 312 -1 1456 111 0 73 chr17 64904837 64904939 -24599614 + AluSx SINE Alu 113 221 -91 215 40 0 0 chr17 64905039 64905064 -24599489 + (A)n Simple_repeat Simple_repeat 1 25 0 1314 113 0 0 chr17 64905071 64905248 -24599305 + AluSg/x SINE Alu 125 301 -9 1086 111 0 0 chr17 64905461 64905605 -24598948 - AluSq/x SINE Alu -168 144 1 659 231 35 28 chr17 64906251 64906394 -24598159 - FAM SINE Alu -27 158 15 2184 100 0 76 chr17 64906396 64906588 -24597965 - AluSx SINE Alu -7 305 147 2207 105 3 0 chr17 64906588 64906874 -24597679 - AluY SINE Alu -24 287 1 2184 100 0 76 chr17 64906874 64907011 -24597542 - AluSx SINE Alu -165 147 1 2334 98 0 0 chr17 64907555 64907851 -24596702 - AluSg SINE Alu -14 296 1 192 283 67 0 chr17 64908266 64908326 -24596227 - MIR SINE MIR -150 112 49 224 198 112 5 chr17 64908420 64908503 -24596050 + MIR SINE MIR 72 159 -62 21 0 0 0 chr17 64908602 64908623 -24595930 + AT_rich Low_complexity Low_complexity 1 21 0 2059 102 33 0 chr17 64909051 64909355 -24595198 + AluSp SINE Alu 1 313 0 2051 129 3 10 chr17 64909605 64909915 -24594638 + AluSx SINE Alu 3 310 -2 2191 109 3 3 chr17 64909915 64910218 -24594335 + AluSx SINE Alu 1 304 -8 2357 83 7 7 chr17 64910218 64910519 -24594034 + AluSc SINE Alu 1 302 -7 207 0 0 0 chr17 64910527 64910550 -24594003 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 2098 152 3 0 chr17 64910627 64910936 -24593617 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr17 64912149 64912171 -24592382 + GC_rich Low_complexity Low_complexity 1 22 0 509 228 18 0 chr17 64912888 64913002 -24591551 + MIR SINE MIR 59 174 -88 884 105 0 30 chr17 64913137 64913270 -24591283 - FLAM_C SINE Alu -2 131 3 1051 142 5 35 chr17 64913530 64913727 -24590826 - AluJb SINE Alu 0 312 122 217 146 42 21 chr17 64964099 64964147 -24540406 + (CCCCAG)n Simple_repeat Simple_repeat 3 51 0 180 152 0 0 chr17 64965399 64965432 -24539121 + (CA)n Simple_repeat Simple_repeat 2 34 0 198 71 0 0 chr17 64965473 64965501 -24539052 + (CA)n Simple_repeat Simple_repeat 1 28 0 823 180 22 27 chr17 64966177 64966382 -24538171 + MLT1C LTR MaLR 207 467 0 2892 131 12 8 chr17 64966577 64967058 -24537495 + MER1A DNA MER1_type 47 529 0 360 133 0 0 chr17 64967257 64967317 -24537236 + (CA)n Simple_repeat Simple_repeat 2 61 0 2037 123 3 0 chr17 64967359 64967681 -24536872 - AluSp SINE Alu 0 323 1 450 262 12 30 chr17 64968159 64968327 -24536226 + CT-rich Low_complexity Low_complexity 2 166 0 221 222 0 0 chr17 64968626 64968671 -24535882 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 64969157 64969182 -24535371 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1423 182 112 29 chr17 64969731 64970071 -24534482 + THE1C LTR MaLR 8 375 0 183 80 0 0 chr17 64970421 64970446 -24534107 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1737 195 21 3 chr17 64970525 64970863 -24533690 + MER2 DNA MER2_type 1 344 0 563 216 40 0 chr17 64971581 64971706 -24532847 - LTR65 LTR ERV1 -535 134 5 404 296 30 40 chr17 64971871 64972070 -24532483 - L2 LINE L2 -182 3090 2894 1785 143 0 0 chr17 64972265 64972537 -24532016 + AluJb SINE Alu 1 272 -40 761 48 0 10 chr17 64972538 64972641 -24531912 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 730 235 29 85 chr17 64973321 64973593 -24530960 + MER90 LTR ERV1 1 257 -318 337 219 0 0 chr17 64973597 64973670 -24530883 - L1MB8 LINE L1 -2 6176 6104 886 83 8 45 chr17 64973670 64973803 -24530750 + AluJo SINE Alu 18 145 -167 1384 141 4 4 chr17 64973805 64974026 -24530527 + AluSg/x SINE Alu 74 295 -12 632 196 189 28 chr17 64974026 64974169 -24530384 + AluJo/FRAM SINE Alu 137 302 0 741 133 0 42 chr17 64974180 64974323 -24530230 + L1PA15 LINE L1 6023 6159 -6 2541 112 50 16 chr17 64974372 64974809 -24529744 - L1MA3 LINE L1 0 6305 5854 451 98 0 0 chr17 64974916 64974977 -24529576 - Alu SINE Alu -256 62 2 2083 120 3 0 chr17 64974978 64975270 -24529283 - AluSx SINE Alu -19 293 1 2191 103 13 0 chr17 64975455 64975755 -24528798 - AluSx SINE Alu -8 304 1 1089 206 8 42 chr17 64975984 64976246 -24528307 + AluJb SINE Alu 59 311 -1 2021 118 10 3 chr17 64976298 64976594 -24527959 + AluSx SINE Alu 1 298 -14 2140 88 3 10 chr17 64976597 64976892 -24527661 + AluY SINE Alu 1 293 -18 1975 99 46 0 chr17 64977111 64977395 -24527158 + AluSx SINE Alu 1 297 -15 1999 127 0 3 chr17 64977419 64977719 -24526834 + AluSx SINE Alu 1 299 -13 2356 89 0 0 chr17 64977720 64978024 -24526529 + AluSx SINE Alu 1 304 -8 660 140 0 44 chr17 64978027 64978141 -24526412 + FLAM_C SINE Alu 2 110 -33 1982 107 55 0 chr17 64978207 64978498 -24526055 - AluSq SINE Alu -6 307 1 21 36 0 0 chr17 64978519 64978547 -24526006 + AT_rich Low_complexity Low_complexity 1 28 0 233 227 227 11 chr17 64979723 64979811 -24524742 - MIR SINE MIR -6 256 150 915 129 0 0 chr17 64980284 64980416 -24524137 - FLAM_C SINE Alu -1 132 1 2006 112 27 0 chr17 64980435 64980729 -24523824 - AluSx SINE Alu -4 308 7 1457 156 78 4 chr17 64980812 64981069 -24523484 + AluJb SINE Alu 16 291 -21 380 155 0 0 chr17 64981081 64981139 -24523414 + AluYb8 SINE Alu 136 193 -115 1932 131 0 0 chr17 64981960 64982268 -24522285 + AluSx SINE Alu 1 308 0 1028 151 239 0 chr17 64983257 64983475 -24521078 - AluJb SINE Alu -32 280 11 23 33 0 0 chr17 64983828 64983858 -24520695 + AT_rich Low_complexity Low_complexity 1 30 0 1528 187 13 26 chr17 64983946 64984251 -24520302 - AluJo SINE Alu -1 301 1 1520 186 11 4 chr17 64984315 64984595 -24519958 - AluJo SINE Alu -30 282 1 180 0 0 0 chr17 64984738 64984758 -24519795 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr17 64984882 64984916 -24519637 + AT_rich Low_complexity Low_complexity 1 34 0 965 151 12 29 chr17 64985000 64985172 -24519381 - FAM SINE Alu -5 170 2 1285 118 104 9 chr17 64985309 64985521 -24519032 - AluSg/x SINE Alu -10 300 69 2022 70 3 63 chr17 64985700 64986033 -24518520 - AluSx SINE Alu 0 315 1 598 165 21 0 chr17 64986528 64986625 -24517928 + FLAM_C SINE Alu 35 133 -10 22 0 0 0 chr17 64986630 64986652 -24517901 + AT_rich Low_complexity Low_complexity 1 22 0 2138 86 36 3 chr17 64987078 64987379 -24517174 - AluSq SINE Alu -2 311 1 1290 110 0 98 chr17 64987379 64987572 -24516981 - AluSg/x SINE Alu -6 304 138 1989 118 3 40 chr17 64987572 64987749 -24516804 - AluSq SINE Alu -2 311 150 2052 111 3 0 chr17 64987749 64988038 -24516515 - AluSx SINE Alu -13 299 10 1989 118 3 40 chr17 64988038 64988183 -24516370 - AluSq SINE Alu -163 150 1 1290 110 0 98 chr17 64988183 64988234 -24516319 - AluSg/x SINE Alu -172 138 84 2258 103 0 0 chr17 64988240 64988550 -24516003 - AluSg SINE Alu 0 310 1 2258 86 3 0 chr17 64988610 64988913 -24515640 - AluSp SINE Alu -9 304 1 244 184 58 0 chr17 64988951 64989038 -24515515 + (TA)n Simple_repeat Simple_repeat 2 93 0 257 100 100 0 chr17 64989174 64989214 -24515339 + HY1 scRNA scRNA 1 44 -68 1422 140 125 7 chr17 64989342 64989621 -24514932 - AluJb SINE Alu 0 312 1 2110 92 0 10 chr17 64990043 64990338 -24514215 + AluSg SINE Alu 1 292 -18 213 39 0 0 chr17 64991219 64991245 -24513308 + (T)n Simple_repeat Simple_repeat 1 26 0 2090 89 16 16 chr17 64992111 64992414 -24512139 - AluSq SINE Alu -10 303 1 189 0 0 0 chr17 64994299 64994320 -24510233 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 2133 71 28 3 chr17 64995518 64995801 -24508752 + AluSx SINE Alu 1 290 -22 2132 112 0 0 chr17 64995966 64996269 -24508284 - AluSx SINE Alu -5 307 5 474 195 0 12 chr17 64996765 64996847 -24507706 + AluJ/FLAM SINE Alu 2 82 -230 2052 86 38 3 chr17 64996854 64997146 -24507407 + AluSp SINE Alu 1 302 -11 1481 197 30 3 chr17 64997197 64997496 -24507057 - AluJb SINE Alu -4 308 2 2099 114 16 0 chr17 64997515 64997821 -24506732 + AluSx SINE Alu 1 311 -1 1051 179 167 8 chr17 64998066 64998306 -24506247 + AluJb SINE Alu 11 288 -24 30 27 0 0 chr17 64999307 64999344 -24505209 + AT_rich Low_complexity Low_complexity 1 37 0 2257 79 0 16 chr17 65000240 65000545 -24504008 - AluSq SINE Alu -13 300 1 216 0 0 0 chr17 65000545 65000569 -24503984 + (T)n Simple_repeat Simple_repeat 1 24 0 659 131 50 0 chr17 65000569 65000668 -24503885 - U6 snRNA snRNA -3 104 1 208 221 139 70 chr17 65001001 65001087 -24503466 - MIR SINE MIR -9 253 162 2344 59 7 0 chr17 65001264 65001571 -24502982 - AluY SINE Alu -2 309 1 791 143 8 15 chr17 65001770 65001903 -24502650 - FLAM_A SINE Alu 0 133 2 1600 143 0 73 chr17 65001971 65002285 -24502268 - AluJb SINE Alu -21 291 1 1847 146 0 29 chr17 65002498 65002806 -24501747 + AluSx SINE Alu 1 299 -13 855 83 7 69 chr17 65003071 65003215 -24501338 + MER4A LTR ERV1 2 136 -528 2072 111 3 0 chr17 65003218 65003515 -24501038 + AluY SINE Alu 1 298 -13 2016 99 13 19 chr17 65003524 65003838 -24500715 + AluSx SINE Alu 1 312 0 195 42 0 0 chr17 65003842 65003866 -24500687 + (GA)n Simple_repeat Simple_repeat 1 24 0 1779 145 3 16 chr17 65003894 65004030 -24500523 + AluSx SINE Alu 1 137 -175 2243 99 3 0 chr17 65004030 65004334 -24500219 + AluSp SINE Alu 1 305 -8 1779 145 3 16 chr17 65004334 65004507 -24500046 + AluSx SINE Alu 137 306 -6 1748 144 17 14 chr17 65005850 65006141 -24498412 - AluSx SINE Alu -20 292 1 918 127 8 0 chr17 65006141 65006275 -24498278 - AluSq/x SINE Alu -178 135 1 249 257 95 0 chr17 65006534 65006608 -24497945 + L2 LINE L2 3187 3267 -5 2106 99 11 0 chr17 65006871 65007155 -24497398 + AluSp SINE Alu 2 288 -25 1919 160 13 0 chr17 65007207 65007514 -24497039 + AluJb SINE Alu 1 311 -1 1626 167 0 7 chr17 65007519 65007807 -24496746 + AluJb SINE Alu 2 287 -25 1197 148 168 31 chr17 65007820 65008076 -24496477 + AluSg1 SINE Alu 1 291 -18 1653 123 56 58 chr17 65008085 65008255 -24496298 - MER4B LTR ERV1 -269 341 172 2287 66 0 16 chr17 65008255 65008560 -24495993 + AluY SINE Alu 1 300 -11 1653 123 56 58 chr17 65008560 65008731 -24495822 - MER4B LTR ERV1 -438 172 1 2249 107 0 3 chr17 65009080 65009389 -24495164 - AluSx SINE Alu -4 308 1 1612 166 0 31 chr17 65009486 65009775 -24494778 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr17 65009781 65009804 -24494749 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 256 261 123 0 chr17 65010244 65010309 -24494244 + L2 LINE L2 3241 3313 0 1933 152 0 0 chr17 65010915 65011211 -24493342 + AluJb SINE Alu 1 296 -16 186 43 0 0 chr17 65011212 65011235 -24493318 + (CA)n Simple_repeat Simple_repeat 2 24 0 1606 176 7 26 chr17 65012158 65012465 -24492088 - AluJb SINE Alu -11 301 1 1840 32 0 5 chr17 65013136 65013357 -24491196 - AluY SINE Alu -9 302 83 2265 94 0 0 chr17 65013712 65014010 -24490543 - AluSx SINE Alu -14 298 1 1952 135 0 20 chr17 65014319 65014622 -24489931 - AluSx SINE Alu -15 297 1 1992 124 0 0 chr17 65014779 65015089 -24489464 - AluSg SINE Alu 0 310 1 2178 107 3 0 chr17 65015165 65015465 -24489088 + AluSp SINE Alu 1 301 -12 1236 108 0 0 chr17 65015671 65015838 -24488715 - AluSq SINE Alu -21 292 126 2596 35 0 6 chr17 65015838 65016149 -24488404 - AluY SINE Alu -2 309 1 453 201 164 31 chr17 65016205 65016364 -24488189 - MIR SINE MIR 0 262 83 2140 96 0 26 chr17 65016458 65016761 -24487792 + AluSg SINE Alu 7 301 -9 694 195 0 8 chr17 65017111 65017239 -24487314 + AluJo SINE Alu 29 155 -157 1910 128 32 0 chr17 65017281 65017563 -24486990 - AluSq SINE Alu -16 297 7 1548 158 33 0 chr17 65017624 65017917 -24486636 - AluJo SINE Alu 0 302 1 1620 174 0 16 chr17 65017977 65018281 -24486272 - AluJo SINE Alu -13 299 1 1902 105 0 75 chr17 65018398 65018704 -24485849 + AluSx SINE Alu 1 283 -29 2260 109 0 0 chr17 65018952 65019263 -24485290 + AluSx SINE Alu 1 311 -1 1094 150 0 0 chr17 65019352 65019525 -24485028 - AluJb SINE Alu -6 306 134 2049 110 0 35 chr17 65019900 65020218 -24484335 - AluSx SINE Alu -5 307 1 894 134 20 13 chr17 65020290 65020439 -24484114 - FAM SINE Alu -16 169 20 1183 181 84 4 chr17 65020553 65020802 -24483751 + AluJo SINE Alu 5 273 -39 243 191 112 0 chr17 65020842 65020931 -24483622 + MLT1F-int LTR MaLR 1248 1346 -25 654 187 91 80 chr17 65020953 65021104 -24483449 + MLT1F LTR MaLR 5 160 -382 2024 111 0 65 chr17 65021104 65021428 -24483125 + AluSx SINE Alu 1 303 -9 654 187 91 80 chr17 65021428 65021463 -24483090 + MLT1F LTR MaLR 160 193 -349 1738 142 6 57 chr17 65021537 65021681 -24482872 + AluJo SINE Alu 1 151 -161 2151 75 4 0 chr17 65021681 65021988 -24482565 + AluSc SINE Alu 1 308 0 1738 142 6 57 chr17 65021988 65022160 -24482393 + AluJo SINE Alu 151 302 -10 2068 108 3 29 chr17 65022317 65022631 -24481922 + AluSg SINE Alu 1 306 -4 476 265 151 5 chr17 65022958 65023143 -24481410 + HAL1 LINE L1 1 212 -2295 1775 165 6 37 chr17 65023202 65023524 -24481029 + AluSx SINE Alu 1 312 0 755 272 140 28 chr17 65023539 65023932 -24480621 + HAL1 LINE L1 329 765 -1742 219 321 245 0 chr17 65023979 65024085 -24480468 - L2 LINE L2 -8 3305 3174 2018 253 73 45 chr17 65024098 65024324 -24480229 + HAL1 LINE L1 1409 1627 -880 2087 98 3 14 chr17 65024324 65024621 -24479932 - AluY SINE Alu -17 294 1 2018 253 73 45 chr17 65024621 65024919 -24479634 + HAL1 LINE L1 1627 1963 -544 1669 159 3 33 chr17 65024919 65025084 -24479469 - AluJo SINE Alu -12 300 147 1728 124 28 24 chr17 65025084 65025375 -24479178 - AluY SINE Alu -19 292 1 1669 159 3 33 chr17 65025375 65025510 -24479043 - AluJo SINE Alu -165 147 9 2018 253 73 45 chr17 65025510 65025722 -24478831 + HAL1 LINE L1 1963 2167 -340 396 207 0 0 chr17 65025752 65025863 -24478690 + (TG)n Simple_repeat Simple_repeat 2 112 0 1966 105 24 14 chr17 65025893 65026187 -24478366 - AluSq SINE Alu -16 297 1 338 218 23 0 chr17 65026213 65026300 -24478253 + HAL1 LINE L1 2305 2393 -114 1909 159 0 3 chr17 65026365 65026674 -24477879 - AluJb SINE Alu -4 308 1 2302 93 0 7 chr17 65026706 65027016 -24477537 + AluSg SINE Alu 1 308 -2 2501 50 0 0 chr17 65027031 65027333 -24477220 + AluY SINE Alu 1 302 -9 275 188 16 0 chr17 65027333 65027397 -24477156 - L1ME2 LINE L1 -10 6154 6090 25 0 0 0 chr17 65027430 65027455 -24477098 + AT_rich Low_complexity Low_complexity 1 25 0 2002 110 10 13 chr17 65028194 65028494 -24476059 - AluSc SINE Alu -6 303 5 1845 102 48 44 chr17 65028590 65028883 -24475670 + AluSg SINE Alu 1 294 -16 1529 207 7 7 chr17 65029304 65029468 -24475085 - AluJo SINE Alu -12 300 134 2089 115 6 10 chr17 65029468 65029780 -24474773 - AluSp SINE Alu -2 311 1 1529 207 7 7 chr17 65029780 65029915 -24474638 - AluJo SINE Alu -177 135 1 1861 133 17 0 chr17 65029989 65030282 -24474271 - AluSx SINE Alu -14 298 1 452 157 0 124 chr17 65030500 65030621 -24473932 - L2 LINE L2 -544 2770 2665 2018 95 41 34 chr17 65030623 65030917 -24473636 + AluSg SINE Alu 1 296 -14 420 120 0 40 chr17 65030918 65030993 -24473560 + L1MB8 LINE L1 6107 6178 0 826 218 148 13 chr17 65031490 65031608 -24472945 + MIR SINE MIR 3 104 -158 1893 116 34 0 chr17 65031608 65031902 -24472651 - AluSx SINE Alu -8 304 1 826 218 148 13 chr17 65031902 65032012 -24472541 + MIR SINE MIR 104 262 0 2089 99 30 7 chr17 65032116 65032418 -24472135 + AluSp SINE Alu 1 309 -4 1877 141 0 3 chr17 65032569 65032860 -24471693 - AluSx SINE Alu -22 290 1 1989 120 3 3 chr17 65032876 65033176 -24471377 - AluSq SINE Alu -13 300 1 2141 97 0 3 chr17 65033191 65033480 -24471073 - AluSc SINE Alu -21 288 1 2284 92 0 0 chr17 65033629 65033935 -24470618 - AluY SINE Alu -3 308 3 1148 58 0 0 chr17 65034416 65034555 -24469998 - MER85 DNA T2_type 0 139 1 1441 125 17 66 chr17 65034657 65034805 -24469748 - L1MA4 LINE L1 -22 6278 6124 1980 112 28 0 chr17 65034805 65035092 -24469461 - AluSq SINE Alu -18 295 1 1441 125 17 66 chr17 65035092 65035205 -24469348 - L1MA4 LINE L1 -176 6124 6030 835 156 16 0 chr17 65035205 65035333 -24469220 - FLAM_C SINE Alu -1 132 3 1441 125 17 66 chr17 65035333 65035358 -24469195 - L1MA4 LINE L1 -270 6030 6005 2108 121 0 10 chr17 65035396 65035709 -24468844 - AluSx SINE Alu -1 311 2 1151 162 0 144 chr17 65035726 65035905 -24468648 - AluJo SINE Alu -17 295 92 1980 142 0 0 chr17 65035905 65036208 -24468345 - AluSx SINE Alu -9 303 1 2012 123 13 13 chr17 65036218 65036386 -24468167 - AluSx SINE Alu -11 301 131 1996 111 13 13 chr17 65036386 65036693 -24467860 - AluSq SINE Alu -6 307 1 2012 123 13 13 chr17 65036693 65036825 -24467728 - AluSx SINE Alu -180 132 1 1151 162 0 144 chr17 65036825 65036961 -24467592 - AluJo SINE Alu -230 82 16 356 129 0 252 chr17 65037075 65037102 -24467451 + MER5B DNA MER1_type 1 33 -145 2114 120 0 3 chr17 65037102 65037403 -24467150 + AluSx SINE Alu 1 300 -12 356 129 0 252 chr17 65037403 65037454 -24467099 + MER5B DNA MER1_type 33 95 -83 2281 81 0 3 chr17 65037454 65037751 -24466802 + AluSx SINE Alu 1 296 -16 356 129 0 252 chr17 65037751 65037762 -24466791 + MER5B DNA MER1_type 95 44 -134 1918 154 0 7 chr17 65037762 65038068 -24466485 + AluSx SINE Alu 1 304 -8 356 129 0 252 chr17 65038068 65038123 -24466430 + MER5B DNA MER1_type 43 110 -68 216 0 0 0 chr17 65038779 65038803 -24465750 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 456 206 0 31 chr17 65038803 65038894 -24465659 + MER5B DNA MER1_type 91 178 0 1279 97 6 0 chr17 65039604 65039779 -24464774 + AluSg/x SINE Alu 131 306 -4 242 267 0 17 chr17 65039795 65039855 -24464698 - L2 LINE L2 -10 3262 3204 1963 128 7 14 chr17 65039892 65040026 -24464527 + AluSx SINE Alu 1 134 -178 2124 91 0 3 chr17 65040026 65040345 -24464208 + AluSq SINE Alu 1 318 0 1963 128 7 14 chr17 65040345 65040506 -24464047 + AluSx SINE Alu 134 295 -17 212 366 21 38 chr17 65040614 65040800 -24463753 - L2 LINE L2 -412 2902 2720 1218 205 13 17 chr17 65040813 65041052 -24463501 - AluJo SINE Alu -74 238 1 2350 68 0 3 chr17 65041062 65041358 -24463195 - AluY SINE Alu -16 295 1 244 316 155 16 chr17 65041606 65041793 -24462760 - L2 LINE L2 -965 2349 2137 2060 98 54 0 chr17 65041839 65042135 -24462418 - AluSq SINE Alu -1 312 1 2204 92 7 0 chr17 65042135 65042437 -24462116 - AluSx SINE Alu -7 305 1 2296 102 0 6 chr17 65042508 65042822 -24461731 + AluSx SINE Alu 1 312 0 2020 107 7 0 chr17 65042831 65043111 -24461442 + AluSx SINE Alu 21 302 -10 313 161 0 0 chr17 65043123 65043176 -24461377 + AluSc SINE Alu 134 178 -121 438 126 0 69 chr17 65043177 65043264 -24461289 + FAM SINE Alu 105 185 0 223 308 193 43 chr17 65043271 65043372 -24461181 - L2 LINE L2 -1390 1924 1839 2282 78 3 0 chr17 65043372 65043665 -24460888 - AluSg SINE Alu -16 294 1 223 308 193 43 chr17 65043665 65043937 -24460616 - L2 LINE L2 -1475 1839 1495 2132 84 0 21 chr17 65044271 65044558 -24459995 - AluSg SINE Alu -29 281 1 1703 147 16 22 chr17 65044811 65045125 -24459428 + AluJb SINE Alu 1 312 0 896 105 0 30 chr17 65045385 65045518 -24459035 + FLAM_C SINE Alu 3 131 -2 557 228 18 0 chr17 65045653 65045767 -24458786 - MIR SINE MIR -88 174 59 22 0 0 0 chr17 65046484 65046506 -24458047 + GC_rich Low_complexity Low_complexity 1 22 0 1975 152 3 0 chr17 65047719 65048028 -24456525 - AluSx SINE Alu -2 310 1 252 0 0 0 chr17 65048105 65048133 -24456420 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2203 86 7 7 chr17 65048141 65048443 -24456110 - AluSc SINE Alu -7 302 1 2057 109 3 3 chr17 65048443 65048745 -24455808 - AluSx SINE Alu -9 303 1 1941 136 3 3 chr17 65048745 65049054 -24455499 - AluSx SINE Alu 0 312 3 1939 102 33 0 chr17 65049304 65049608 -24454945 - AluSp SINE Alu 0 313 1 21 0 0 0 chr17 65050036 65050057 -24454496 + AT_rich Low_complexity Low_complexity 1 21 0 249 223 99 14 chr17 65050125 65050239 -24454314 - MIR SINE MIR -62 146 71 218 303 124 0 chr17 65050325 65050428 -24454125 + MIR SINE MIR 39 162 -46 2175 105 0 0 chr17 65050808 65051104 -24453449 + AluSg SINE Alu 1 296 -14 2304 78 0 10 chr17 65051571 65051880 -24452673 - AluSq SINE Alu -7 306 1 2270 83 0 3 chr17 65052044 65052344 -24452209 + AluSq SINE Alu 1 299 -14 1131 207 11 40 chr17 65053006 65053281 -24451272 + AluJo SINE Alu 1 267 -45 540 0 0 0 chr17 65053295 65053355 -24451198 + (CA)n Simple_repeat Simple_repeat 2 61 0 2167 97 10 0 chr17 65053486 65053786 -24450767 - AluSp SINE Alu -10 303 1 439 158 13 22 chr17 65053914 65054003 -24450550 - L1MB8 LINE L1 -52 6120 6041 1848 139 4 0 chr17 65054003 65054276 -24450277 + AluSx SINE Alu 1 274 -38 2474 38 0 0 chr17 65054282 65054572 -24449981 - AluY SINE Alu -21 290 1 869 165 0 0 chr17 65054631 65054764 -24449789 + FLAM_C SINE Alu 1 133 0 297 237 92 0 chr17 65054802 65054878 -24449675 - L1MB8 LINE L1 -164 6014 5932 1436 151 81 11 chr17 65054883 65055155 -24449398 + AluJb SINE Alu 12 302 -10 2627 176 39 99 chr17 65055155 65055224 -24449329 - L1MB8 LINE L1 -240 5944 5872 2205 105 0 0 chr17 65055224 65055520 -24449033 - AluSx SINE Alu -8 304 9 2627 176 39 99 chr17 65055520 65055691 -24448862 - L1MB8 LINE L1 -312 5872 5692 1559 185 3 13 chr17 65055691 65056004 -24448549 - AluJo SINE Alu -2 310 1 2627 176 39 99 chr17 65056004 65056022 -24448531 - L1MB8 LINE L1 -492 5692 5674 1733 180 0 3 chr17 65056022 65056156 -24448397 + AluJb SINE Alu 1 134 -178 2130 99 20 0 chr17 65056156 65056450 -24448103 + AluSg1 SINE Alu 2 301 -8 1733 180 0 3 chr17 65056450 65056621 -24447932 + AluJb SINE Alu 134 305 -7 2627 176 39 99 chr17 65056621 65057036 -24447517 - L1MB8 LINE L1 -510 5674 5236 662 156 62 23 chr17 65057036 65057164 -24447389 - FLAM_C SINE Alu 0 133 1 2627 176 39 99 chr17 65057164 65057192 -24447361 - L1MB8 LINE L1 -948 5236 5208 2183 85 0 0 chr17 65057192 65057502 -24447051 - AluSg SINE Alu 0 310 1 2627 176 39 99 chr17 65057502 65057524 -24447029 - L1MB8 LINE L1 -976 5208 5186 1975 120 7 0 chr17 65057524 65057816 -24446737 - AluSq SINE Alu -18 295 2 2168 101 0 0 chr17 65057822 65058118 -24446435 - AluSg SINE Alu -14 296 1 2627 176 39 99 chr17 65058118 65058146 -24446407 - L1MB8 LINE L1 -1003 5181 5153 1640 161 53 3 chr17 65058146 65058431 -24446122 - AluJb SINE Alu -13 299 1 2627 176 39 99 chr17 65058431 65058625 -24445928 - L1MB8 LINE L1 -1031 5153 5016 2179 98 0 3 chr17 65058632 65058929 -24445624 - AluSq SINE Alu -17 296 1 694 204 7 7 chr17 65058941 65059078 -24445475 - FLAM_A SINE Alu -5 137 1 1845 201 16 138 chr17 65059081 65059506 -24445047 - L1MB8 LINE L1 -1110 5036 4561 1862 129 11 7 chr17 65059506 65059785 -24444768 - AluSx SINE Alu -32 280 1 1845 201 16 138 chr17 65059785 65059806 -24444747 - L1MB8 LINE L1 -1585 4561 4539 2036 126 7 0 chr17 65059806 65060116 -24444437 - AluSx SINE Alu 0 312 1 2306 73 0 10 chr17 65060123 65060424 -24444129 - AluY SINE Alu -11 300 3 1845 201 16 138 chr17 65060424 65060664 -24443889 - L1MB8 LINE L1 -1613 4533 4426 1411 174 27 15 chr17 65060664 65060923 -24443630 - AluJb SINE Alu -15 297 36 377 204 35 9 chr17 65060946 65061059 -24443494 - L1MB8 LINE L1 -1718 4428 4313 2169 92 0 26 chr17 65061320 65061624 -24442929 - AluSx SINE Alu -16 296 1 2689 16 0 0 chr17 65061737 65062041 -24442512 - AluY SINE Alu -7 304 1 2123 111 0 3 chr17 65062044 65062351 -24442202 - AluSp SINE Alu -7 306 1 252 0 0 0 chr17 65062351 65062379 -24442174 + (T)n Simple_repeat Simple_repeat 1 28 0 2243 110 0 0 chr17 65062379 65062689 -24441864 - AluSg SINE Alu 0 310 1 2070 97 0 76 chr17 65062718 65062855 -24441698 + AluSx SINE Alu 1 147 -165 2080 105 3 0 chr17 65062855 65063141 -24441412 + AluY SINE Alu 1 287 -24 2070 97 0 76 chr17 65063141 65063333 -24441220 + AluSx SINE Alu 147 305 -7 691 217 35 28 chr17 65063335 65063478 -24441075 + FAM SINE Alu 15 158 -27 1027 111 0 0 chr17 65064124 65064268 -24440285 + AluSq/x SINE Alu 1 144 -168 2095 99 0 45 chr17 65064481 65064662 -24439891 - AluSx SINE Alu -9 303 140 1659 90 5 0 chr17 65064662 65064884 -24439669 - AluSq SINE Alu -6 307 85 2095 99 0 45 chr17 65064884 65065015 -24439538 - AluSx SINE Alu -172 140 5 21 57 0 0 chr17 65065556 65065591 -24438962 + AT_rich Low_complexity Low_complexity 1 35 0 244 250 0 0 chr17 65066121 65066169 -24438384 + L2 LINE L2 3225 3272 0 671 188 9 0 chr17 65066701 65066813 -24437740 + MER2 DNA MER2_type 22 134 -211 2175 110 0 0 chr17 65066815 65067124 -24437429 - AluSx SINE Alu -3 309 1 443 200 0 0 chr17 65067162 65067237 -24437316 + MER2 DNA MER2_type 268 342 -3 21 36 0 0 chr17 65067342 65067370 -24437183 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 65067431 65067460 -24437093 + AT_rich Low_complexity Low_complexity 1 29 0 264 114 0 0 chr17 65067870 65067905 -24436648 - U2 snRNA snRNA -153 35 1 711 228 0 0 chr17 65067971 65068098 -24436455 + FLAM_A SINE Alu 1 127 -6 2139 107 0 3 chr17 65068102 65068411 -24436142 - AluY SINE Alu -2 309 2 2060 120 0 0 chr17 65068598 65068889 -24435664 - AluSx SINE Alu -21 291 1 2275 73 30 0 chr17 65068899 65069200 -24435353 - AluSp SINE Alu -3 310 1 2003 114 3 0 chr17 65069232 65069522 -24435031 - AluSx SINE Alu -20 292 2 1709 224 93 86 chr17 65069590 65070255 -24434298 - HAL1 LINE L1 -474 2033 1374 1529 142 42 48 chr17 65070255 65070544 -24434009 - AluJo SINE Alu -25 287 1 1709 224 93 86 chr17 65070544 65070564 -24433989 - HAL1 LINE L1 -1133 1374 1356 1460 199 7 3 chr17 65070564 65070860 -24433693 - AluJo SINE Alu -15 297 1 1709 224 93 86 chr17 65070860 65071065 -24433488 - HAL1 LINE L1 -1151 1356 1154 2325 79 7 0 chr17 65071065 65071355 -24433198 - AluSp SINE Alu -21 292 1 1709 224 93 86 chr17 65071355 65071476 -24433077 - HAL1 LINE L1 -1353 1154 1035 2152 123 0 16 chr17 65071476 65071793 -24432760 - AluSx SINE Alu 0 312 1 1709 224 93 86 chr17 65071793 65071950 -24432603 - HAL1 LINE L1 -1472 1035 864 1789 137 4 0 chr17 65071950 65072212 -24432341 - AluSx SINE Alu -7 305 43 1709 224 93 86 chr17 65072212 65072298 -24432255 - HAL1 LINE L1 -1643 864 780 681 108 0 0 chr17 65072366 65072459 -24432094 + AluSq SINE Alu 1 93 -219 812 153 0 15 chr17 65072459 65072590 -24431963 + AluSp/q SINE Alu 166 294 -19 475 307 135 83 chr17 65072601 65073119 -24431434 - HAL1 LINE L1 -1804 703 159 1678 99 0 0 chr17 65073230 65073441 -24431112 - AluSq SINE Alu -102 211 1 2017 149 3 0 chr17 65073825 65074121 -24430432 - AluSx SINE Alu -15 297 1 2202 113 0 0 chr17 65075164 65075464 -24429089 - AluSx SINE Alu -12 300 1 356 220 79 45 chr17 65075466 65075643 -24428910 - L1MC4a LINE L1 -569 7239 7057 2168 99 45 3 chr17 65075675 65075967 -24428586 - AluSc SINE Alu -5 304 1 2107 131 10 0 chr17 65075988 65076285 -24428268 - AluSg SINE Alu -10 300 1 1270 147 3 127 chr17 65076285 65076584 -24427969 - AluSg1 SINE Alu -15 294 33 242 280 61 68 chr17 65076584 65076623 -24427930 - L1MC4a LINE L1 -1226 6582 6544 2281 110 0 0 chr17 65076623 65076931 -24427622 - AluSg1 SINE Alu -1 308 1 242 280 61 68 chr17 65076931 65077176 -24427377 - L1MC4a LINE L1 -1264 6544 6300 2232 98 11 0 chr17 65077176 65077463 -24427090 + AluSg SINE Alu 2 291 -19 242 280 61 68 chr17 65077463 65077634 -24426919 - L1MC4a LINE L1 -1508 6300 6129 475 268 130 42 chr17 65077755 65077919 -24426634 - L1MC4a LINE L1 -1791 6017 5869 2307 83 0 10 chr17 65077919 65078254 -24426299 - AluY SINE Alu 0 311 1 475 268 130 42 chr17 65078254 65078443 -24426110 - L1MC4a LINE L1 -1939 5869 5633 728 118 15 44 chr17 65078934 65079070 -24425483 - FLAM_C SINE Alu -1 132 1 185 226 113 0 chr17 65079245 65079298 -24425255 + L2 LINE L2 3255 3313 0 2243 107 0 3 chr17 65080208 65080507 -24424046 - AluSp SINE Alu -15 298 1 2132 114 0 3 chr17 65080631 65080930 -24423623 - AluSq SINE Alu -15 298 1 278 115 0 33 chr17 65080938 65080999 -24423554 - L1MC4 LINE L1 -2 8040 7982 2171 107 0 0 chr17 65081002 65081282 -24423271 + AluSg SINE Alu 2 281 -29 3103 174 159 49 chr17 65081303 65081397 -24423156 - L1MC4 LINE L1 -51 7991 7909 180 111 0 0 chr17 65081397 65081424 -24423129 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3103 174 159 49 chr17 65081424 65081493 -24423060 - L1MC4 LINE L1 -133 7909 7849 1956 96 114 11 chr17 65081493 65081773 -24422780 - AluSg SINE Alu -1 309 1 3103 174 159 49 chr17 65081773 65082250 -24422303 - L1MC4 LINE L1 -193 7849 7426 1800 103 118 11 chr17 65082250 65082522 -24422031 - AluSg1 SINE Alu -8 301 1 3103 174 159 49 chr17 65082522 65082801 -24421752 - L1MC4 LINE L1 -616 7426 6968 2086 112 10 33 chr17 65085246 65085550 -24419003 + AluSq SINE Alu 1 297 -16 1813 171 0 7 chr17 65085674 65085966 -24418587 - AluJb SINE Alu -12 300 11 253 333 141 34 chr17 65087851 65088013 -24416540 - MIR SINE MIR -57 151 8 633 200 0 44 chr17 65088029 65088164 -24416389 + FLAM_A SINE Alu 1 129 -4 2106 95 0 34 chr17 65088591 65088885 -24415668 - AluSx SINE Alu -8 304 21 2100 104 18 7 chr17 65088921 65089230 -24415323 - AluSx SINE Alu 0 312 1 1256 170 0 5 chr17 65089691 65089891 -24414662 + AluJo SINE Alu 5 203 -109 1908 175 0 10 chr17 65089982 65090285 -24414268 - AluJb SINE Alu -12 300 1 2820 135 13 25 chr17 65090488 65090961 -24413592 - MLT1C LTR MaLR 0 467 1 1025 188 61 28 chr17 65091279 65091492 -24413061 - AluJb SINE Alu -1 311 92 669 184 154 26 chr17 65091624 65091823 -24412730 - L1MC5 LINE L1 -496 7465 7230 405 0 0 0 chr17 65091823 65091868 -24412685 + (TG)n Simple_repeat Simple_repeat 2 46 0 669 184 154 26 chr17 65091868 65091902 -24412651 - L1MC5 LINE L1 -731 7230 7202 518 217 174 12 chr17 65091918 65092079 -24412474 + MER20 DNA MER1_type 33 219 0 987 188 49 150 chr17 65092079 65092393 -24412160 - L1MC5 LINE L1 -755 7206 6965 1656 199 6 6 chr17 65092393 65092704 -24411849 - AluJb SINE Alu 0 312 2 987 188 49 150 chr17 65092704 65092917 -24411636 - L1MC5 LINE L1 -996 6965 6732 2265 116 0 3 chr17 65093399 65093709 -24410844 - AluSg SINE Alu -1 309 1 22 0 0 0 chr17 65094177 65094199 -24410354 + AT_rich Low_complexity Low_complexity 1 22 0 1453 180 78 18 chr17 65094443 65094727 -24409826 - AluJb SINE Alu -11 301 1 1804 73 5 0 chr17 65094759 65094979 -24409574 - AluSg/x SINE Alu -13 299 79 2515 73 0 0 chr17 65094979 65095281 -24409272 - AluY SINE Alu -9 302 1 656 92 0 0 chr17 65095281 65095368 -24409185 - AluSc SINE Alu -222 87 1 1741 102 4 17 chr17 65095884 65096119 -24408434 + AluSx SINE Alu 64 295 -17 2218 85 24 14 chr17 65096720 65097013 -24407540 + AluSg SINE Alu 1 296 -14 312 172 0 0 chr17 65097014 65097072 -24407481 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 852 180 0 30 chr17 65097559 65097726 -24406827 + FRAM SINE Alu 1 162 -4 2194 107 0 16 chr17 65097915 65098223 -24406330 - AluSx SINE Alu -7 305 3 818 277 158 49 chr17 65098875 65099525 -24405028 - L2 LINE L2 0 3313 2592 26 0 0 0 chr17 65100419 65100445 -24404108 + AT_rich Low_complexity Low_complexity 1 26 0 832 97 65 24 chr17 65105192 65105316 -24399237 - FLAM_C SINE Alu -14 129 1 2129 102 0 38 chr17 65106311 65106624 -24397929 - AluSx SINE Alu -11 301 1 225 254 109 0 chr17 65106624 65106679 -24397874 - MIR3 SINE MIR -28 180 120 313 268 57 72 chr17 65107640 65107839 -24396714 + MER5B DNA MER1_type 1 178 0 23 54 0 0 chr17 65110589 65110626 -24393927 + AT_rich Low_complexity Low_complexity 1 37 0 1972 101 73 0 chr17 65110707 65110993 -24393560 + AluSx SINE Alu 1 307 -5 1260 274 197 13 chr17 65111867 65112501 -24392052 + L2 LINE L2 1827 2577 -737 310 257 88 58 chr17 65112681 65112763 -24391790 - L2 LINE L2 -15 3298 3220 2110 117 34 0 chr17 65112763 65113054 -24391499 + AluSg SINE Alu 1 301 -9 310 257 88 58 chr17 65113054 65113142 -24391411 - L2 LINE L2 -93 3220 3123 237 151 0 0 chr17 65113561 65113614 -24390939 + A-rich Low_complexity Low_complexity 1 53 0 2067 112 3 10 chr17 65113652 65113946 -24390607 + AluSx SINE Alu 1 292 -20 354 217 121 0 chr17 65114065 65114148 -24390405 - FLAM_A SINE Alu -10 123 31 1983 161 0 3 chr17 65114157 65114461 -24390092 - AluJb SINE Alu -9 303 1 2254 106 3 0 chr17 65114699 65115000 -24389553 - AluSx SINE Alu -10 302 1 2426 89 0 0 chr17 65115006 65115308 -24389245 - AluY SINE Alu -9 302 1 270 208 65 0 chr17 65118367 65118444 -24386109 + L1MC3 LINE L1 7696 7777 -8 2010 111 3 38 chr17 65118460 65118776 -24385777 + AluSx SINE Alu 1 305 -7 2259 77 3 7 chr17 65118836 65119122 -24385431 + AluSc SINE Alu 5 289 -20 2184 89 0 3 chr17 65119128 65119420 -24385133 + AluSx SINE Alu 1 291 -21 1628 186 38 3 chr17 65119801 65120092 -24384461 + AluJb SINE Alu 1 301 -11 197 384 0 0 chr17 65120319 65120392 -24384161 - L2 LINE L2 0 3272 3200 966 161 0 0 chr17 65120410 65120547 -24384006 + AluSq/x SINE Alu 1 137 -176 2163 117 10 0 chr17 65120547 65120847 -24383706 + AluSx SINE Alu 1 303 -9 821 134 16 0 chr17 65121022 65121149 -24383404 - AluSg/x SINE Alu -9 303 175 249 278 248 33 chr17 65121283 65121585 -24382968 - L2 LINE L2 -439 2875 2509 2291 97 3 0 chr17 65121975 65122275 -24382278 - AluSg SINE Alu -9 301 1 311 320 20 33 chr17 65122461 65122611 -24381942 - L2 LINE L2 -896 2418 2271 1243 195 74 114 chr17 65122683 65122930 -24381623 - L1MDa LINE L1 -1886 4654 4399 2283 89 0 6 chr17 65122930 65123243 -24381310 - AluSx SINE Alu -1 311 1 1918 128 7 3 chr17 65123245 65123542 -24381011 - AluSx SINE Alu -14 298 1 1243 195 74 114 chr17 65123542 65123712 -24380841 - L1MDa LINE L1 -2142 4398 4251 1299 126 0 0 chr17 65123713 65123904 -24380649 - AluSg/x SINE Alu -3 309 119 2074 114 0 0 chr17 65123919 65124224 -24380329 - AluSx SINE Alu 0 305 1 1676 241 150 19 chr17 65124225 65124840 -24379713 - L1MDa LINE L1 -2294 4246 3552 1616 181 0 7 chr17 65124868 65125160 -24379393 - AluJb SINE Alu -22 290 1 403 100 0 114 chr17 65125179 65125249 -24379304 - AluJ/FLAM SINE Alu -249 63 2 748 199 28 38 chr17 65125261 65125412 -24379141 - L1MDa LINE L1 -4549 1991 1841 1887 121 31 10 chr17 65125412 65125701 -24378852 + AluSx SINE Alu 3 297 -15 748 199 28 38 chr17 65125701 65125760 -24378793 - L1MDa LINE L1 -4699 1841 1783 1725 201 142 25 chr17 65125827 65126271 -24378282 + MLT1D LTR MaLR 10 505 0 557 189 8 25 chr17 65126271 65126393 -24378160 - L1MDa LINE L1 -4993 1550 1431 1508 94 0 0 chr17 65126401 65126603 -24377950 - AluSq SINE Alu -8 305 104 395 295 13 67 chr17 65126811 65126873 -24377680 + L2 LINE L2 3132 3196 -76 1874 155 3 0 chr17 65126873 65127177 -24377376 - AluSx SINE Alu -7 305 1 395 295 13 67 chr17 65127177 65127263 -24377290 + L2 LINE L2 3196 3272 0 272 310 86 0 chr17 65127264 65127380 -24377173 + L2 LINE L2 1923 2048 -1266 1662 158 22 92 chr17 65127555 65127833 -24376720 + MER2 DNA MER2_type 1 250 -95 1893 110 4 0 chr17 65127833 65128097 -24376456 - AluSx SINE Alu -13 299 35 1662 158 22 92 chr17 65128097 65128178 -24376375 + MER2 DNA MER2_type 250 335 -10 1817 166 0 0 chr17 65128204 65128499 -24376054 + AluJb SINE Alu 1 295 -17 2142 116 0 0 chr17 65128507 65128801 -24375752 + AluSx SINE Alu 1 294 -18 511 188 111 21 chr17 65128812 65128956 -24375597 + L1MA10 LINE L1 6174 6330 -4 378 271 89 103 chr17 65130170 65130464 -24374089 - L1ME4a LINE L1 -6 6115 5826 1695 165 0 45 chr17 65130464 65130677 -24373876 + AluJb SINE Alu 1 197 -115 2362 45 14 0 chr17 65130677 65130969 -24373584 - AluY SINE Alu -15 296 1 1695 165 0 45 chr17 65130969 65131064 -24373489 + AluJb SINE Alu 197 295 -17 378 271 89 103 chr17 65131064 65131149 -24373404 - L1ME4a LINE L1 -295 5826 5741 1290 197 47 25 chr17 65131195 65131515 -24373038 - L1ME3A LINE L1 0 6170 5844 1987 130 7 3 chr17 65132035 65132334 -24372219 - AluSx SINE Alu -7 305 6 629 96 48 0 chr17 65132514 65132618 -24371935 - Tigger2 DNA MER2_type -2412 306 198 3447 86 25 2 chr17 65132619 65133094 -24371459 + LTR15 LTR ERV1 1 486 -7 1209 113 31 21 chr17 65133105 65133243 -24371310 - Tigger2 DNA MER2_type -2522 196 54 2258 103 6 0 chr17 65133243 65133554 -24370999 + AluSp SINE Alu 1 313 0 1209 113 31 21 chr17 65133554 65133609 -24370944 - Tigger2 DNA MER2_type -2664 54 1 317 282 48 29 chr17 65133614 65133717 -24370836 + L1M4b LINE L1 17 121 -6738 1052 219 52 68 chr17 65134193 65134535 -24370018 + L1M4b LINE L1 642 1216 -5643 414 208 10 0 chr17 65134719 65134815 -24369738 + L1M4b LINE L1 1633 1729 -5126 22 35 0 0 chr17 65134815 65134844 -24369709 + AT_rich Low_complexity Low_complexity 1 29 0 2060 100 7 27 chr17 65134851 65135150 -24369403 + AluSx SINE Alu 1 293 -19 2933 199 44 48 chr17 65135153 65135749 -24368804 + L1ME2 LINE L1 5322 5916 -248 1943 132 0 20 chr17 65135749 65136052 -24368501 + AluSx SINE Alu 1 297 -15 2933 199 44 48 chr17 65136052 65136294 -24368259 + L1ME2 LINE L1 5916 6157 -7 368 230 10 10 chr17 65136288 65136388 -24368165 + L1MC4a LINE L1 6344 6443 -1365 * 882 214 51 93 chr17 65136380 65136461 -24368092 + L1MC4 LINE L1 7701 7784 -258 1712 176 0 10 chr17 65136461 65136762 -24367791 + AluJb SINE Alu 1 298 -14 882 214 51 93 chr17 65136762 65137035 -24367518 + L1MC4 LINE L1 7784 8040 -2 397 287 73 40 chr17 65137121 65137271 -24367282 - MIR3 SINE MIR -31 177 23 2169 114 10 0 chr17 65137299 65137607 -24366946 - AluSx SINE Alu -1 311 1 631 167 0 9 chr17 65137608 65137716 -24366837 - AluJo SINE Alu -178 134 28 1763 141 3 38 chr17 65137865 65138185 -24366368 + AluJb SINE Alu 2 310 -2 2005 110 34 0 chr17 65138624 65138916 -24365637 + AluSq SINE Alu 1 302 -11 2044 203 197 36 chr17 65138992 65139114 -24365439 + L1M4 LINE L1 4493 4594 -1552 2343 80 0 0 chr17 65139114 65139414 -24365139 + AluY SINE Alu 1 300 -11 2044 203 197 36 chr17 65139414 65139991 -24364562 + L1M4 LINE L1 4594 5305 -841 1232 94 6 0 chr17 65139994 65140165 -24364388 + AluSx SINE Alu 1 172 -140 1084 145 106 0 chr17 65140171 65140378 -24364175 + L1MC2 LINE L1 6111 6339 -5 872 127 0 8 chr17 65140391 65140525 -24364028 - AluSq/x SINE Alu -180 133 1 1592 125 0 0 chr17 65140866 65141090 -24363463 + AluSx SINE Alu 1 224 -88 1946 132 0 3 chr17 65141109 65141396 -24363157 + AluSq SINE Alu 11 296 -17 1652 161 3 19 chr17 65141435 65141745 -24362808 - AluJb SINE Alu -1 311 7 252 340 85 0 chr17 65141800 65141894 -24362659 + L2 LINE L2 3206 3307 -6 2283 87 0 13 chr17 65141933 65142243 -24362310 - AluY SINE Alu -5 306 1 2069 107 3 3 chr17 65142905 65143196 -24361357 - AluSx SINE Alu -21 291 1 2196 104 0 0 chr17 65143223 65143520 -24361033 - AluSx SINE Alu -15 297 1 497 256 25 44 chr17 65143562 65143765 -24360788 - L1MC4 LINE L1 -96 7946 7748 23 0 0 0 chr17 65143974 65143997 -24360556 + AT_rich Low_complexity Low_complexity 1 23 0 789 197 0 0 chr17 65144000 65144132 -24360421 + FLAM_C SINE Alu 1 132 -1 731 323 143 61 chr17 65144172 65144216 -24360337 - L3 LINE CR1 -225 1352 1313 924 192 131 0 chr17 65144216 65144414 -24360139 - MER58A DNA MER1_type 0 224 1 731 323 143 61 chr17 65144414 65144747 -24359806 - L3 LINE CR1 -264 1313 1009 2360 65 0 0 chr17 65144747 65145039 -24359514 - AluY SINE Alu -19 292 1 731 323 143 61 chr17 65145039 65145517 -24359036 - L3 LINE CR1 -568 1009 425 1042 148 0 22 chr17 65145607 65145790 -24358763 + AluSg/x SINE Alu 132 310 0 481 316 48 19 chr17 65145850 65146059 -24358494 - L3 LINE CR1 -1292 285 71 210 356 0 0 chr17 65146510 65146569 -24357984 - L3 LINE CR1 -1325 252 194 2003 97 53 7 chr17 65146844 65147143 -24357410 - AluSq SINE Alu 0 313 1 1850 164 0 0 chr17 65147531 65147835 -24356718 - AluSx SINE Alu -8 304 1 1420 186 25 11 chr17 65147838 65148123 -24356430 - AluJb SINE Alu -23 289 1 2338 96 0 0 chr17 65148293 65148605 -24355948 + AluSx SINE Alu 1 312 0 1449 177 9 65 chr17 65149232 65149808 -24354745 + L1ME3A LINE L1 5444 5948 -226 1028 205 31 9 chr17 65149854 65150078 -24354475 + L1MB5 LINE L1 5945 6173 -1 922 188 24 18 chr17 65150875 65151045 -24353508 + FAM SINE Alu 1 171 -4 2308 73 0 0 chr17 65151458 65151760 -24352793 + AluY SINE Alu 1 302 -9 1908 131 0 38 chr17 65152424 65152737 -24351816 + AluSq SINE Alu 1 301 -12 370 242 61 38 chr17 65152982 65153114 -24351439 + L1ME3A LINE L1 6031 6165 -5 21 0 0 0 chr17 65153326 65153347 -24351206 + AT_rich Low_complexity Low_complexity 1 21 0 1601 153 39 14 chr17 65154985 65155267 -24349286 + AluJo SINE Alu 1 289 -23 28 0 0 0 chr17 65155338 65155366 -24349187 + AT_rich Low_complexity Low_complexity 1 28 0 336 122 20 0 chr17 65155835 65155884 -24348669 + 5S rRNA rRNA 1 50 -71 1606 154 0 4 chr17 65155910 65156170 -24348383 + AluJb SINE Alu 7 265 -47 1604 167 3 10 chr17 65156779 65157079 -24347474 + AluJo SINE Alu 1 298 -14 888 207 78 21 chr17 65157366 65157608 -24346945 - L1ME3 LINE L1 -20 6142 5887 219 36 0 0 chr17 65158023 65158051 -24346502 - MIR SINE MIR -112 150 123 433 302 34 13 chr17 65158640 65158789 -24345764 + MIR SINE MIR 47 198 -64 580 192 25 8 chr17 65158811 65158931 -24345622 + MER20 DNA MER1_type 98 219 0 536 268 145 4 chr17 65158994 65159229 -24345324 - MER113 DNA MER1_type? -234 287 20 360 275 0 42 chr17 65159653 65159773 -24344780 + L2 LINE L2 2458 2572 -742 552 220 22 50 chr17 65160795 65160834 -24343719 + L1MD3 LINE L1 7819 7858 -137 1633 151 0 27 chr17 65160834 65161133 -24343420 - AluJo SINE Alu -21 291 1 552 220 22 50 chr17 65161133 65161275 -24343278 + L1MD3 LINE L1 7858 7995 0 880 293 41 18 chr17 65166595 65167107 -24337446 - L1MC3 LINE L1 -1771 6014 5491 181 264 48 96 chr17 65171710 65171835 -24332718 - MIR SINE MIR -72 136 18 * 193 326 82 61 chr17 65171815 65171962 -24332591 + MIR SINE MIR 94 243 -19 1751 192 21 3 chr17 65173036 65173374 -24331179 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 65173453 65173478 -24331075 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1423 182 112 29 chr17 65173828 65174168 -24330385 - THE1C LTR MaLR 0 375 8 183 80 0 0 chr17 65174717 65174742 -24329811 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 221 222 0 0 chr17 65175228 65175273 -24329280 + C-rich Low_complexity Low_complexity 4 48 0 450 262 12 30 chr17 65175572 65175740 -24328813 + GA-rich Low_complexity Low_complexity 2 166 0 1982 123 3 0 chr17 65176218 65176540 -24328013 + AluSp SINE Alu 1 323 0 360 133 0 0 chr17 65176582 65176642 -24327911 + (TG)n Simple_repeat Simple_repeat 2 61 0 3212 129 12 8 chr17 65176841 65177322 -24327231 - MER1A DNA MER1_type 0 529 47 900 180 22 27 chr17 65177517 65177722 -24326831 - MLT1C LTR MaLR 0 467 207 241 130 65 0 chr17 65177722 65177768 -24326785 + MLT-int LTR MaLR 143 191 -1544 198 71 0 0 chr17 65178398 65178426 -24326127 + (TG)n Simple_repeat Simple_repeat 1 28 0 180 152 0 0 chr17 65178467 65178500 -24326053 + (TG)n Simple_repeat Simple_repeat 2 34 0 217 146 42 21 chr17 65179752 65179800 -24324753 + (CTGGGG)n Simple_repeat Simple_repeat 3 51 0 242 250 56 0 chr17 65180795 65180867 -24323686 + MIR SINE MIR 117 192 -70 1467 177 31 74 chr17 65180894 65180964 -24323589 - L1MB2 LINE L1 -1 6170 6098 216 0 0 0 chr17 65180964 65180988 -24323565 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 1467 177 31 74 chr17 65180988 65181307 -24323246 - L1MB2 LINE L1 -73 6098 5798 221 0 35 0 chr17 65182458 65182487 -24322066 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1516 139 104 0 chr17 65182492 65182751 -24321802 - AluJo SINE Alu -26 286 1 503 233 8 23 chr17 65184170 65184299 -24320254 + MER103 DNA DNA 38 164 -2 2034 182 34 36 chr17 65185232 65185738 -24318815 - MLT1D LTR MaLR 0 505 1 452 243 68 11 chr17 65186394 65186571 -24317982 + L1ME4a LINE L1 5935 6121 0 817 135 23 8 chr17 65186626 65186759 -24317794 + AluJo SINE Alu 3 137 -175 32 0 0 0 chr17 65186759 65186791 -24317762 + AT_rich Low_complexity Low_complexity 1 32 0 1828 134 3 14 chr17 65187022 65187313 -24317240 - AluJo SINE Alu -24 288 1 197 264 57 0 chr17 65187424 65187477 -24317076 + MER5A DNA MER1_type 130 185 -4 654 182 71 47 chr17 65187500 65187670 -24316883 + MER5B DNA MER1_type 2 175 -3 243 79 0 0 chr17 65188208 65188246 -24316307 + (GA)n Simple_repeat Simple_repeat 1 38 0 638 213 66 20 chr17 65188392 65188589 -24315964 - L1ME1 LINE L1 -97 6069 5864 * 2197 225 144 39 chr17 65188588 65188980 -24315573 - L1MEc LINE L1 -3018 3388 3039 1800 152 3 3 chr17 65188980 65189276 -24315277 + AluJb SINE Alu 1 296 -16 2197 225 144 39 chr17 65189276 65190015 -24314538 - L1MEc LINE L1 -3367 3039 2177 898 91 8 8 chr17 65190015 65190147 -24314406 + AluSp SINE Alu 81 212 -101 548 298 22 36 chr17 65190157 65190382 -24314171 - L1MEc LINE L1 -5414 995 774 1013 156 6 0 chr17 65191345 65191505 -24313048 + AluSg/x SINE Alu 131 291 -21 325 290 117 6 chr17 65191521 65191838 -24312715 - L1M4 LINE L1 -1529 4617 4266 262 309 92 10 chr17 65192116 65192323 -24312230 - L1M4 LINE L1 -2136 4010 3787 288 304 201 5 chr17 65192698 65192892 -24311661 - MIR SINE MIR -7 255 24 789 221 126 0 chr17 65193238 65193428 -24311125 - MIR SINE MIR -3 259 46 1561 158 37 24 chr17 65193592 65193889 -24310664 - AluJb SINE Alu -11 301 1 502 322 69 0 chr17 65197496 65197670 -24306883 - MER91A DNA MER1_type -1 195 10 426 202 217 8 chr17 65198713 65198842 -24305711 - L1ME4a LINE L1 -3 6118 5963 321 248 70 70 chr17 65198850 65199080 -24305473 - L1ME4a LINE L1 -201 5920 5691 22 0 0 0 chr17 65199542 65199564 -24304989 + AT_rich Low_complexity Low_complexity 1 22 0 244 315 174 20 chr17 65199564 65199713 -24304840 - MIR3 SINE MIR -21 187 16 381 218 28 134 chr17 65199722 65199864 -24304689 - MER5B DNA MER1_type -7 171 45 506 262 126 39 chr17 65199875 65200081 -24304472 - MIR SINE MIR -19 243 20 21 71 0 0 chr17 65200143 65200185 -24304368 + AT_rich Low_complexity Low_complexity 1 42 0 524 285 92 95 chr17 65200554 65200944 -24303609 + L1ME4a LINE L1 5505 5893 -228 212 222 93 0 chr17 65202017 65202071 -24302482 - L2 LINE L2 0 3272 3214 24 0 0 0 chr17 65202071 65202095 -24302458 + AT_rich Low_complexity Low_complexity 1 24 0 383 0 21 0 chr17 65202096 65202143 -24302410 + (TA)n Simple_repeat Simple_repeat 2 49 0 306 0 0 0 chr17 65202246 65202280 -24302273 + (TG)n Simple_repeat Simple_repeat 2 35 0 1718 158 0 7 chr17 65202280 65202553 -24302000 - AluJb SINE Alu -39 273 1 1919 191 11 22 chr17 65203166 65203527 -24301026 + MLT1A1 LTR MaLR 9 365 0 260 269 191 3 chr17 65203592 65203716 -24300837 - MIR SINE MIR -65 143 3 539 294 92 18 chr17 65204405 65204623 -24299930 - MIR SINE MIR -20 242 9 227 311 44 33 chr17 65204614 65204704 -24299849 + MIR SINE MIR 159 249 -13 * 2626 192 18 36 chr17 65204986 65205534 -24299019 + MLT1F LTR MaLR 2 539 -3 279 325 26 35 chr17 65205555 65205669 -24298884 - MIR SINE MIR -122 140 28 202 238 113 50 chr17 65206022 65206102 -24298451 - MIR SINE MIR -55 207 123 2268 178 52 0 chr17 65206133 65206538 -24298015 + MSTB LTR MaLR 1 426 0 8047 170 117 1 chr17 65206538 65208018 -24296535 + MSTB-int LTR MaLR 1 1651 0 2085 180 46 0 chr17 65208018 65208368 -24296185 + MSTB LTR MaLR 1 366 -60 208 254 0 45 chr17 65209147 65209214 -24295339 + A-rich Low_complexity Low_complexity 3 66 0 283 324 131 21 chr17 65209579 65209724 -24294829 - MIR SINE MIR -70 192 32 202 236 91 0 chr17 65210103 65210158 -24294395 - MIR SINE MIR -79 183 124 409 245 37 136 chr17 65210626 65210920 -24293633 + L1MC5 LINE L1 7311 7575 -386 2378 196 63 0 chr17 65210965 65211476 -24293077 - L1M4 LINE L1 -1198 4948 4406 191 322 26 35 chr17 65211614 65211729 -24292824 + MIR3 SINE MIR 53 166 -42 * 388 284 148 6 chr17 65211720 65211896 -24292657 - MIR SINE MIR -57 205 5 203 204 19 0 chr17 65212166 65212220 -24292333 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1061 138 12 0 chr17 65213401 65213568 -24290985 - FRAM SINE Alu -10 166 1 1628 160 91 22 chr17 65214612 65214930 -24289623 - MER58B DNA MER1_type 0 341 2 2596 68 30 3 chr17 65215859 65216197 -24288356 + THE1A LTR MaLR 1 347 -8 1928 119 14 0 chr17 65217151 65217457 -24287096 + AluSp SINE Alu 1 310 0 254 263 74 0 chr17 65218858 65218953 -24285600 - L1ME4a LINE L1 -201 5920 5819 306 220 165 22 chr17 65219822 65219913 -24284640 - L2 LINE L2 0 3313 3210 359 342 37 12 chr17 65219973 65220112 -24284441 - L2 LINE L2 -216 3056 2911 2693 13 0 3 chr17 65220112 65220423 -24284130 + AluYa5 SINE Alu 1 310 -1 359 342 37 12 chr17 65220423 65220444 -24284109 - L2 LINE L2 -361 2911 2892 280 274 29 20 chr17 65221117 65221219 -24283334 + MIR SINE MIR 78 180 -82 601 259 12 24 chr17 65221226 65221396 -24283157 - MER105 DNA DNA -1 203 36 329 348 116 60 chr17 65221592 65222144 -24282409 + L2 LINE L2 2687 3272 0 912 187 103 65 chr17 65222344 65222558 -24281995 + MER58A DNA MER1_type 3 224 0 21 0 0 0 chr17 65223235 65223256 -24281297 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 65223274 65223309 -24281244 + AT_rich Low_complexity Low_complexity 1 35 0 352 261 54 8 chr17 65224575 65224705 -24279848 - MIR SINE MIR -49 213 78 286 272 149 26 chr17 65226724 65226838 -24277715 - MIR SINE MIR -119 143 16 269 265 44 0 chr17 65227693 65227761 -24276792 + MLT1L LTR MaLR 1 71 -544 1228 156 50 0 chr17 65227827 65228026 -24276527 + MER20 DNA MER1_type 11 219 0 237 186 20 38 chr17 65228035 65228119 -24276434 - MER5B DNA MER1_type -11 167 2 423 303 123 51 chr17 65228125 65228557 -24275996 + MLT1L LTR MaLR 153 615 0 1336 88 18 0 chr17 65228816 65228987 -24275566 + AluY SINE Alu 130 303 -8 1804 159 25 32 chr17 65229545 65229859 -24274694 + AluJo SINE Alu 1 312 0 21 0 0 0 chr17 65230067 65230088 -24274465 + AT_rich Low_complexity Low_complexity 1 21 0 561 297 100 56 chr17 65230147 65230538 -24274015 - L2 LINE L2 -24 3248 2841 2516 41 0 50 chr17 65232226 65232546 -24272007 + AluY SINE Alu 1 304 -7 481 253 160 13 chr17 65232730 65232880 -24271673 + MLT1J LTR MaLR 2 173 -338 216 264 19 0 chr17 65233436 65233489 -24271064 + (TG)n Simple_repeat Simple_repeat 2 55 0 497 296 25 25 chr17 65234728 65234924 -24269629 + L2 LINE L2 3118 3313 0 271 295 57 8 chr17 65235037 65235159 -24269394 - MIR SINE MIR -95 167 40 3007 135 30 70 chr17 65235350 65235431 -24269122 + MER44D DNA MER2_type 2 85 -2402 2118 112 7 10 chr17 65235431 65235734 -24268819 + AluSx SINE Alu 2 303 -9 3007 135 30 70 chr17 65235734 65236224 -24268329 + MER44D DNA MER2_type 85 605 0 307 288 293 0 chr17 65236239 65236437 -24268116 - MIR SINE MIR -5 257 2 198 310 203 6 chr17 65236477 65236635 -24267918 + MIR SINE MIR 63 251 -11 288 284 137 40 chr17 65237245 65237291 -24267262 + L1ME4a LINE L1 5569 5609 -512 2295 93 3 7 chr17 65237291 65237601 -24266952 - AluY SINE Alu -2 309 1 288 284 137 40 chr17 65237601 65237998 -24266555 + L1ME4a LINE L1 5609 6055 -66 226 283 157 15 chr17 65238671 65238819 -24265734 - MIR SINE MIR -63 145 16 459 279 62 11 chr17 65239122 65239301 -24265252 + MER117 DNA MER1_type 1 188 -9 1651 163 40 47 chr17 65239614 65239914 -24264639 + AluJo SINE Alu 1 298 -14 904 118 0 22 chr17 65241667 65241803 -24262750 + FLAM_C SINE Alu 1 133 0 201 254 45 30 chr17 65241920 65241987 -24262566 - L2 LINE L2 0 3272 3205 183 270 79 0 chr17 65242899 65242962 -24261591 + L2 LINE L2 2991 3058 -214 277 271 186 0 chr17 65243224 65243353 -24261200 - MIR SINE MIR -109 153 1 569 262 63 5 chr17 65243663 65243854 -24260699 + MIR SINE MIR 3 204 -58 335 315 22 0 chr17 65244290 65244379 -24260174 + MIR SINE MIR 19 109 -153 975 225 52 55 chr17 65245423 65245748 -24258805 + MLT1J2 LTR MaLR 2 325 -125 5040 51 18 2 chr17 65245913 65246929 -24257624 - MER11A LTR ERVK 0 1266 1 261 267 89 11 chr17 65246929 65247000 -24257553 + MLT1J2 LTR MaLR 490 567 0 2571 137 59 30 chr17 65247180 65247272 -24257281 + LTR47A LTR ERVL 1 89 -363 2283 93 0 17 chr17 65247272 65247573 -24256980 + AluY SINE Alu 1 296 -15 2571 137 59 30 chr17 65247573 65247919 -24256634 + LTR47A LTR ERVL 89 452 0 28 0 0 0 chr17 65248555 65248583 -24255970 + AT_rich Low_complexity Low_complexity 1 28 0 292 341 24 8 chr17 65248745 65248868 -24255685 - MIR SINE MIR -115 147 23 422 280 35 14 chr17 65250338 65250481 -24254072 + MIR SINE MIR 47 192 -70 489 242 17 0 chr17 65250509 65250629 -24253924 + MER20 DNA MER1_type 98 219 0 420 294 20 14 chr17 65250639 65250785 -24253768 + MIR SINE MIR 20 166 -96 335 194 0 0 chr17 65250785 65250849 -24253704 + L1ME1 LINE L1 4822 4885 -1261 293 94 38 0 chr17 65250849 65250902 -24253651 + MER41A LTR ERV1 418 472 -82 4412 162 42 24 chr17 65250909 65252191 -24252362 + L1MA9 LINE L1 4873 6290 -22 21 0 0 0 chr17 65255787 65255808 -24248745 + GC_rich Low_complexity Low_complexity 1 21 0 291 221 80 80 chr17 65256009 65256122 -24248431 + L1ME1 LINE L1 5572 5684 -437 764 161 25 81 chr17 65256181 65256301 -24248252 + MER58B DNA MER1_type 190 300 -2120 2436 65 0 29 chr17 65256301 65256611 -24247942 - AluY SINE Alu -10 301 1 764 161 25 81 chr17 65256611 65256651 -24247902 + MER58B DNA MER1_type 300 341 0 674 246 101 19 chr17 65257907 65258114 -24246439 + MIR SINE MIR 9 232 -30 426 295 87 40 chr17 65258203 65258525 -24246028 + L1ME4a LINE L1 5575 5911 -210 427 293 104 0 chr17 65258618 65258782 -24245771 + MIR SINE MIR 63 243 -19 1804 124 3 35 chr17 65258913 65259195 -24245358 - AluSx SINE Alu -10 302 30 218 274 163 0 chr17 65259900 65259988 -24244565 + MIR SINE MIR 61 145 -63 349 372 41 0 chr17 65260054 65260226 -24244327 + MER91A DNA MER1_type 1 179 -17 257 264 69 0 chr17 65260235 65260307 -24244246 + MER91A DNA MER1_type 119 195 -1 357 290 190 0 chr17 65262356 65262556 -24241997 + MIR SINE MIR 3 240 -22 424 294 96 44 chr17 65262616 65262960 -24241593 + L1MC4a LINE L1 5575 5936 -185 366 316 38 8 chr17 65263020 65263153 -24241400 + MIR SINE MIR 40 176 -86 2180 138 0 0 chr17 65263168 65263480 -24241073 - AluSx SINE Alu 0 312 1 222 279 9 45 chr17 65263891 65264002 -24240551 - MIR SINE MIR -140 122 16 563 270 11 11 chr17 65264005 65264183 -24240370 + L1M4 LINE L1 2951 3128 -3018 * 630 213 66 20 chr17 65264182 65264379 -24240174 + L1ME1 LINE L1 5864 6069 -97 297 68 0 0 chr17 65264525 65264569 -24239984 + (TC)n Simple_repeat Simple_repeat 1 44 0 652 182 71 47 chr17 65265108 65265278 -24239275 - MER5B DNA MER1_type -3 175 2 1891 144 3 14 chr17 65265465 65265756 -24238797 + AluJo SINE Alu 1 288 -24 32 0 0 0 chr17 65265987 65266019 -24238534 + AT_rich Low_complexity Low_complexity 1 32 0 829 136 0 8 chr17 65266030 65266162 -24238391 - FLAM_C SINE Alu 0 133 3 456 262 41 17 chr17 65266217 65266389 -24238164 - L1ME4a LINE L1 0 6121 5946 2005 182 34 36 chr17 65267049 65267555 -24236998 + MLT1D LTR MaLR 1 505 0 498 233 8 23 chr17 65268484 65268613 -24235940 - MER103 DNA DNA -2 164 38 1624 139 104 0 chr17 65270032 65270291 -24234262 + AluJo SINE Alu 1 286 -26 221 0 35 0 chr17 65270296 65270325 -24234228 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1452 177 31 74 chr17 65271474 65271793 -24232760 + L1MB2 LINE L1 5798 6098 -73 216 0 0 0 chr17 65271793 65271817 -24232736 + (TGGG)n Simple_repeat Simple_repeat 1 24 0 1452 177 31 74 chr17 65271817 65271887 -24232666 + L1MB2 LINE L1 6098 6170 -1 210 250 56 0 chr17 65271914 65271986 -24232567 - MIR SINE MIR -70 192 117 2334 85 14 0 chr17 65273260 65273555 -24230998 - AluSp SINE Alu -14 299 1 180 248 238 9 chr17 65273711 65273816 -24230737 - MIR SINE MIR -17 245 117 2051 125 6 67 chr17 65274162 65274521 -24230032 - MER1B DNA MER1_type 0 337 1 2223 93 0 3 chr17 65277109 65277409 -24227144 - AluSc SINE Alu -10 299 1 2178 95 0 29 chr17 65277468 65277774 -24226779 - AluSx SINE Alu -15 297 1 1456 172 51 18 chr17 65278291 65278611 -24225942 - AluJb SINE Alu 0 331 3 235 255 51 71 chr17 65279541 65279639 -24224914 - MIR SINE MIR -5 257 162 431 160 38 99 chr17 65279641 65279772 -24224781 - Charlie1 DNA MER1_type -9 2752 2630 629 218 83 57 chr17 65279773 65279920 -24224633 - Charlie1 DNA MER1_type -2532 229 74 1964 134 0 28 chr17 65279920 65280241 -24224312 + AluJb SINE Alu 1 312 0 629 218 83 57 chr17 65280241 65280286 -24224267 - Charlie1 DNA MER1_type -2687 74 32 343 343 133 0 chr17 65280327 65280508 -24224045 - MIR SINE MIR -24 238 34 367 255 0 0 chr17 65281317 65281423 -24223130 + L1ME2 LINE L1 6053 6158 -6 2242 89 0 10 chr17 65281443 65281563 -24222990 + AluY SINE Alu 1 121 -190 243 0 0 0 chr17 65281563 65281590 -24222963 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2242 89 0 10 chr17 65281590 65281771 -24222782 + AluY SINE Alu 121 299 -12 2146 123 0 3 chr17 65281966 65282267 -24222286 + AluSx SINE Alu 1 300 -12 1687 167 44 14 chr17 65283217 65283510 -24221043 + AluJb SINE Alu 1 302 -10 2800 110 17 37 chr17 65284484 65284889 -24219664 - L1M1 LINE L1 -529 5774 5362 2017 130 0 13 chr17 65284889 65285189 -24219364 - AluSx SINE Alu -16 296 1 2800 110 17 37 chr17 65285189 65285207 -24219346 - L1M1 LINE L1 -941 5362 5345 2372 76 3 0 chr17 65285207 65285508 -24219045 - AluSp SINE Alu -11 302 1 2800 110 17 37 chr17 65285508 65285721 -24218832 - L1M1 LINE L1 -958 5345 5142 252 183 0 135 chr17 65285727 65285831 -24218722 - L1MB7 LINE L1 -118 6066 5977 519 157 37 74 chr17 65285831 65285939 -24218614 - AluJo SINE Alu -126 186 83 349 257 61 8 chr17 65286217 65286343 -24218210 + MIR SINE MIR 34 143 -65 2299 91 3 0 chr17 65286732 65287040 -24217513 + AluSp SINE Alu 2 310 -3 809 142 8 0 chr17 65287519 65287646 -24216907 + AluSg/x SINE Alu 174 301 -9 2227 109 0 0 chr17 65287646 65287950 -24216603 + AluSx SINE Alu 1 304 -8 2008 139 21 15 chr17 65287951 65288289 -24216264 - THE1C LTR MaLR -35 340 1 203 300 43 14 chr17 65288899 65288969 -24215584 - L2 LINE L2 -557 2757 2686 271 334 84 48 chr17 65289756 65289902 -24214651 + MIR3 SINE MIR 20 177 -31 228 310 70 0 chr17 65290081 65290181 -24214372 - L2 LINE L2 -2 3311 3205 466 282 102 32 chr17 65290675 65290891 -24213662 + MIR SINE MIR 32 262 0 1930 123 7 17 chr17 65291263 65291565 -24212988 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr17 65291925 65291955 -24212598 + AT_rich Low_complexity Low_complexity 1 30 0 1546 173 7 40 chr17 65291955 65292256 -24212297 - AluJo SINE Alu -21 291 1 23 33 0 0 chr17 65293121 65293151 -24211402 + AT_rich Low_complexity Low_complexity 1 30 0 1374 198 7 30 chr17 65293151 65293449 -24211104 - AluJo SINE Alu -21 291 1 1871 141 26 3 chr17 65295545 65295850 -24208703 + AluJo SINE Alu 1 312 0 1010 152 42 26 chr17 65296920 65296938 -24207615 + AluSg/x SINE Alu 117 133 -177 2142 106 0 6 chr17 65296938 65297249 -24207304 + AluSx SINE Alu 1 309 -3 1010 152 42 26 chr17 65297249 65297421 -24207132 + AluSg/x SINE Alu 133 310 0 315 258 167 0 chr17 65298647 65298767 -24205786 + L1ME4a LINE L1 5982 6121 0 225 0 0 0 chr17 65298771 65298796 -24205757 + (CA)n Simple_repeat Simple_repeat 1 25 0 240 130 0 0 chr17 65298807 65298853 -24205700 + (TTCC)n Simple_repeat Simple_repeat 4 49 0 2158 119 0 10 chr17 65298853 65299165 -24205388 - AluSx SINE Alu 0 312 4 899 85 28 23 chr17 65299171 65299347 -24205206 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 1658 168 3 44 chr17 65299362 65299683 -24204870 - AluJo SINE Alu -4 308 1 1654 168 3 38 chr17 65299712 65300027 -24204526 - AluJb SINE Alu 0 312 9 473 255 34 20 chr17 65300850 65300999 -24203554 + MIR3 SINE MIR 18 168 -40 329 304 48 36 chr17 65301149 65301317 -24203236 + L2 LINE L2 2921 3090 -182 2169 116 3 3 chr17 65301469 65301780 -24202773 - AluSx SINE Alu 0 312 2 294 330 17 8 chr17 65302325 65302443 -24202110 - MIR SINE MIR -31 231 113 318 305 19 9 chr17 65302719 65302824 -24201729 - MIR SINE MIR -109 153 48 237 65 0 0 chr17 65304551 65304582 -24199971 + (CCCCCA)n Simple_repeat Simple_repeat 3 33 0 1898 98 59 0 chr17 65305393 65305679 -24198874 + AluSx SINE Alu 1 303 -9 220 279 186 14 chr17 65306485 65306625 -24197928 + MIR SINE MIR 62 225 -37 3166 144 79 12 chr17 65307809 65308044 -24196509 + MER41C LTR ERV1 1 219 -335 2155 115 0 0 chr17 65308044 65308340 -24196213 + AluSx SINE Alu 1 296 -16 3166 144 79 12 chr17 65308340 65308623 -24195930 + MER41C LTR ERV1 219 554 0 470 257 29 29 chr17 65309299 65309439 -24195114 - MIR SINE MIR -70 192 53 865 169 34 0 chr17 65309479 65309627 -24194926 - L1MC2 LINE L1 0 6344 6192 258 32 0 0 chr17 65310482 65310513 -24194040 + (CA)n Simple_repeat Simple_repeat 1 31 0 737 140 6 0 chr17 65310530 65310694 -24193859 + (CA)n Simple_repeat Simple_repeat 1 165 0 301 252 53 38 chr17 65311901 65312032 -24192521 - L2 LINE L2 -283 2989 2857 235 269 0 15 chr17 65313689 65313756 -24190797 - L2 LINE L2 -56 3257 3192 906 175 66 44 chr17 65313759 65313942 -24190611 + MER5A DNA MER1_type 1 187 -2 199 333 79 0 chr17 65314048 65314174 -24190379 - MIR SINE MIR -56 206 71 224 316 76 0 chr17 65314763 65314842 -24189711 - MIR3 SINE MIR -21 187 103 1827 147 0 0 chr17 65314845 65315118 -24189435 + AluJb SINE Alu 1 273 -39 388 212 161 25 chr17 65315273 65315391 -24189162 - L2 LINE L2 -1 3271 3138 1974 117 45 0 chr17 65315469 65315760 -24188793 + AluSx SINE Alu 1 304 -8 200 221 0 15 chr17 65315884 65315952 -24188601 + G-rich Low_complexity Low_complexity 4 70 0 378 0 0 0 chr17 65317530 65317572 -24186981 + (CA)n Simple_repeat Simple_repeat 2 43 0 1566 163 78 0 chr17 65318832 65319115 -24185438 + AluJo SINE Alu 1 305 -7 662 199 10 0 chr17 65319121 65319310 -24185243 + CT-rich Low_complexity Low_complexity 1 190 0 183 42 0 0 chr17 65319337 65319361 -24185192 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 2070 119 13 10 chr17 65319364 65319674 -24184879 - AluSx SINE Alu -1 311 1 609 288 12 6 chr17 65319850 65320020 -24184533 + MIR SINE MIR 22 192 -70 200 214 0 0 chr17 65320612 65320654 -24183899 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 772 210 5 21 chr17 65320758 65320944 -24183609 - MER53 DNA DNA -6 183 1 1156 144 5 5 chr17 65321202 65321389 -24183164 - AluSq SINE Alu -123 190 4 406 245 24 4 chr17 65321395 65321513 -24183040 - L1ME LINE L1 -451 5670 5543 370 306 104 21 chr17 65321535 65321657 -24182896 - MIR SINE MIR -52 210 65 2142 105 3 22 chr17 65321657 65321972 -24182581 + AluSx SINE Alu 1 309 -3 370 306 104 21 chr17 65321972 65322042 -24182511 - MIR SINE MIR -197 65 2 264 248 80 53 chr17 65322047 65322160 -24182393 - MIR SINE MIR -94 114 8 2180 98 0 14 chr17 65323948 65324244 -24180309 + AluSx SINE Alu 3 294 -18 267 31 0 0 chr17 65324244 65324276 -24180277 + (CAG)n Simple_repeat Simple_repeat 2 33 0 2156 101 0 7 chr17 65324473 65324769 -24179784 - AluSc SINE Alu -15 294 1 216 341 61 49 chr17 65325718 65325882 -24178671 - MIR SINE MIR -50 212 47 527 269 61 20 chr17 65325916 65326113 -24178440 + MIR SINE MIR 47 251 -11 264 273 23 61 chr17 65326814 65326946 -24177607 - MIR3 SINE MIR -48 160 34 2258 91 0 0 chr17 65327547 65327833 -24176720 + AluSq SINE Alu 7 292 -21 2328 84 3 7 chr17 65327841 65328166 -24176387 + AluSp SINE Alu 1 313 0 215 178 22 22 chr17 65328707 65328752 -24175801 + MER5A DNA MER1_type 40 84 -105 186 333 0 0 chr17 65328811 65328871 -24175682 - MER5A DNA MER1_type -102 87 28 498 284 117 41 chr17 65329238 65329555 -24174998 + MER102b DNA MER1_type 1 341 0 1154 140 41 86 chr17 65330016 65330237 -24174316 - AluJb SINE Alu -25 287 77 347 235 0 0 chr17 65330270 65330338 -24174215 + AluJ/FLAM SINE Alu 1 68 -234 1239 166 0 0 chr17 65330438 65330625 -24173928 - AluJb SINE Alu -41 271 85 548 288 82 41 chr17 65330802 65331194 -24173359 - L1ME4a LINE L1 -106 6015 5608 2188 167 85 9 chr17 65332364 65332789 -24171764 + MSTB2 LTR MaLR 1 457 0 272 75 25 0 chr17 65333548 65333588 -24170965 + Alu SINE Alu 1 41 -259 551 128 0 32 chr17 65333688 65333826 -24170727 + AluSg/x SINE Alu 191 325 0 5844 134 26 24 chr17 65333829 65334002 -24170551 + L1MA4 LINE L1 4834 5005 -1295 2145 120 3 0 chr17 65334002 65334303 -24170250 + AluSx SINE Alu 1 302 -10 5844 134 26 24 chr17 65334303 65335580 -24168973 + L1MA4 LINE L1 5005 6285 -15 376 279 68 0 chr17 65335632 65335779 -24168774 + L1MEc LINE L1 1627 1783 -4613 351 271 81 85 chr17 65336218 65336476 -24168077 + L1MEc LINE L1 1738 1994 -4402 334 277 70 52 chr17 65336480 65336548 -24168005 + L1MEc LINE L1 1966 2031 -4184 1928 164 0 0 chr17 65336548 65336858 -24167695 + AluSx SINE Alu 1 310 -2 334 277 70 52 chr17 65336858 65337162 -24167391 + L1MEc LINE L1 2031 2304 -3911 2232 77 59 0 chr17 65337162 65337449 -24167104 + AluY SINE Alu 1 304 -7 334 277 70 52 chr17 65337449 65337630 -24166923 + L1MEc LINE L1 2304 2480 -3735 1858 107 16 0 chr17 65337824 65338092 -24166461 + AluSx SINE Alu 35 306 0 1923 105 43 0 chr17 65338224 65338501 -24166052 - AluSq SINE Alu -24 289 1 281 136 0 0 chr17 65339360 65339404 -24165149 + AluSg/x SINE Alu 192 235 -65 1399 285 151 27 chr17 65339733 65339818 -24164735 + L2 LINE L2 316 389 -2925 2089 141 0 3 chr17 65339818 65340116 -24164437 - AluJb SINE Alu -11 301 5 1399 285 151 27 chr17 65340116 65340704 -24163849 + L2 LINE L2 389 1073 -2241 269 286 0 11 chr17 65340763 65340854 -24163699 - L1MC5 LINE L1 -75 7886 7797 1205 261 151 50 chr17 65340919 65341127 -24163426 + L2 LINE L2 1836 2022 -1292 2048 130 3 0 chr17 65341127 65341412 -24163141 - AluSx SINE Alu -26 286 1 1205 261 151 50 chr17 65341412 65341764 -24162789 + L2 LINE L2 2022 2466 -848 2118 112 20 13 chr17 65341764 65342067 -24162486 + AluSc SINE Alu 1 305 -4 1205 261 151 50 chr17 65342067 65342123 -24162430 + L2 LINE L2 2466 2515 -799 37 77 0 10 chr17 65342257 65342316 -24162237 + AT_rich Low_complexity Low_complexity 1 60 -43 2375 100 0 0 chr17 65342316 65342626 -24161927 + AluSx SINE Alu 1 310 -2 37 77 0 10 chr17 65342626 65342670 -24161883 + AT_rich Low_complexity Low_complexity 60 103 0 2062 147 3 0 chr17 65342672 65342965 -24161588 + AluSx SINE Alu 1 294 -18 2092 151 3 0 chr17 65343096 65343407 -24161146 + AluSp SINE Alu 1 312 -1 1838 171 3 7 chr17 65344605 65344909 -24159644 + AluJb SINE Alu 1 303 -9 23 0 0 0 chr17 65345529 65345552 -24159001 + AT_rich Low_complexity Low_complexity 1 23 0 2197 116 0 3 chr17 65345686 65345989 -24158564 + AluSg SINE Alu 1 302 -8 2259 105 7 0 chr17 65346052 65346348 -24158205 + AluSp SINE Alu 1 298 -15 287 240 19 67 chr17 65346392 65346496 -24158057 - L1ME3A LINE L1 -104 6066 5968 1017 254 62 62 chr17 65346563 65346623 -24157930 - L1ME3A LINE L1 -215 5955 5896 2027 150 7 0 chr17 65346623 65346930 -24157623 - AluJb SINE Alu -3 309 1 1017 254 62 62 chr17 65346930 65347433 -24157120 - L1ME3A LINE L1 -273 5897 5392 2334 105 0 0 chr17 65347433 65347729 -24156824 - AluSg SINE Alu -14 296 1 1364 232 85 46 chr17 65347782 65348216 -24156337 - L1ME3A LINE L1 -1076 5070 4601 339 25 0 0 chr17 65348216 65348256 -24156297 + (CA)n Simple_repeat Simple_repeat 1 40 0 1364 232 85 46 chr17 65348256 65348467 -24156086 - L1ME3A LINE L1 -1545 4601 4400 1003 216 107 57 chr17 65348513 65348898 -24155655 + MLT1C LTR MaLR 6 409 -58 2313 79 23 3 chr17 65348898 65349201 -24155352 + AluSc SINE Alu 1 309 0 377 155 0 14 chr17 65349328 65349399 -24155154 + MLT1C LTR MaLR 398 467 0 2164 89 0 4 chr17 65349480 65349780 -24154773 - AluSg SINE Alu 0 299 1 373 310 147 16 chr17 65349783 65349912 -24154641 - MIR3 SINE MIR -61 147 2 208 93 23 23 chr17 65350083 65350126 -24154427 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 578 191 8 38 chr17 65350216 65350347 -24154206 - FAM SINE Alu -5 44 1 2212 133 0 0 chr17 65350372 65350674 -24153879 - AluSx SINE Alu -10 302 1 1582 161 25 68 chr17 65350675 65350998 -24153555 - AluJb SINE Alu -3 309 1 40 37 0 0 chr17 65351190 65351244 -24153309 + AT_rich Low_complexity Low_complexity 1 54 0 1099 184 11 0 chr17 65352068 65352258 -24152295 + AluJb SINE Alu 103 294 -18 616 189 27 20 chr17 65352260 65352408 -24152145 - MER3 DNA MER1_type -60 149 1 208 380 117 7 chr17 65352710 65352847 -24151706 + MIR3 SINE MIR 42 193 -15 255 188 94 7 chr17 65355819 65355957 -24148596 + (TA)n Simple_repeat Simple_repeat 1 150 0 2124 122 17 0 chr17 65356241 65356536 -24148017 - AluSx SINE Alu -12 300 1 1814 141 88 9 chr17 65358153 65358472 -24146081 - MER7A DNA MER2_type -4 342 1 2069 126 10 3 chr17 65358681 65358982 -24145571 - AluSx SINE Alu -9 303 1 384 0 0 54 chr17 65359805 65359861 -24144692 - L1PB1 LINE L1 -1 6150 6098 2233 114 3 0 chr17 65359863 65360171 -24144382 - AluSx SINE Alu -3 309 1 323 130 37 0 chr17 65360423 65360477 -24144076 + U6 snRNA snRNA 1 56 -51 243 0 0 0 chr17 65360885 65360912 -24143641 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1719 155 3 14 chr17 65360917 65361201 -24143352 - AluJb SINE Alu -31 281 1 658 235 0 0 chr17 65361682 65361814 -24142739 - AluJ SINE Alu -11 301 170 * 670 146 10 0 chr17 65361810 65361913 -24142640 - AluJ SINE Alu -193 119 16 22 0 0 0 chr17 65362854 65362876 -24141677 + AT_rich Low_complexity Low_complexity 1 22 0 2180 123 3 0 chr17 65363222 65363523 -24141030 - AluSx SINE Alu -10 302 1 1209 180 5 15 chr17 65363667 65363873 -24140680 - AluJo SINE Alu -15 297 94 766 169 16 0 chr17 65363998 65364122 -24140431 - FLAM_C SINE Alu -17 126 1 2095 90 0 0 chr17 65364231 65364499 -24140054 + AluY SINE Alu 44 311 0 2009 119 36 0 chr17 65364701 65364979 -24139574 - AluSx SINE Alu -24 288 1 234 0 0 0 chr17 65365643 65365669 -24138884 + (T)n Simple_repeat Simple_repeat 1 26 0 350 346 102 26 chr17 65366192 65366536 -24138017 - L1MC/D LINE L1 -2118 5690 5321 2365 60 0 17 chr17 65366728 65367028 -24137525 - AluY SINE Alu -16 295 1 1248 209 5 0 chr17 65367192 65367412 -24137141 + AluJo SINE Alu 1 221 -91 2042 116 3 7 chr17 65367581 65367865 -24136688 - AluSg SINE Alu -8 302 20 321 153 42 0 chr17 65368035 65368107 -24136446 - AluSc SINE Alu -202 97 23 2444 89 0 0 chr17 65368999 65369302 -24135251 - AluSx SINE Alu -8 304 2 1627 186 11 4 chr17 65370824 65371104 -24133449 + AluJo SINE Alu 1 282 -30 1847 163 0 14 chr17 65371571 65371866 -24132687 + AluJb SINE Alu 1 291 -21 2298 90 13 6 chr17 65372072 65372383 -24132170 + AluSq SINE Alu 1 313 0 23 0 0 0 chr17 65372971 65372994 -24131559 + AT_rich Low_complexity Low_complexity 1 23 0 637 119 201 0 chr17 65373193 65373327 -24131226 + AluSq SINE Alu 18 178 -135 469 154 150 150 chr17 65373442 65373601 -24130952 - MER113 DNA MER1_type? -166 355 197 2305 111 3 0 chr17 65373601 65373907 -24130646 - AluSx SINE Alu -1 311 5 469 154 150 150 chr17 65373907 65373921 -24130632 - MER113 DNA MER1_type? -324 197 184 823 160 0 0 chr17 65373921 65374052 -24130501 - FLAM_C SINE Alu 0 133 3 469 154 150 150 chr17 65374052 65374104 -24130449 - MER113 DNA MER1_type? -336 185 129 401 164 0 0 chr17 65374111 65374184 -24130369 + HY3 scRNA scRNA 26 98 -3 23 33 0 0 chr17 65374184 65374214 -24130339 + AT_rich Low_complexity Low_complexity 1 30 0 1861 142 35 0 chr17 65374369 65374657 -24129896 - AluSx SINE Alu -14 298 1 246 62 0 0 chr17 65374826 65374858 -24129695 + (T)n Simple_repeat Simple_repeat 1 32 0 1395 190 3 28 chr17 65374874 65375158 -24129395 + AluJb SINE Alu 1 277 -35 814 169 7 14 chr17 65375162 65375304 -24129249 - FLAM_C SINE Alu 0 143 3 232 229 9 138 chr17 65375390 65375426 -24129127 - MER5B DNA MER1_type -83 95 56 1288 179 163 12 chr17 65375426 65375677 -24128876 - AluJo SINE Alu -23 289 1 232 229 9 138 chr17 65375677 65375749 -24128804 - MER5B DNA MER1_type -122 56 1 2246 116 0 0 chr17 65376150 65376453 -24128100 - AluSx SINE Alu -9 303 1 2280 119 0 0 chr17 65378502 65378812 -24125741 - AluSx SINE Alu -2 310 1 189 0 0 0 chr17 65378816 65378837 -24125716 + (T)n Simple_repeat Simple_repeat 1 21 0 1901 171 0 0 chr17 65378887 65379186 -24125367 - AluSx SINE Alu -12 300 2 735 205 32 32 chr17 65379252 65379437 -24125116 - MIR SINE MIR -15 247 63 499 160 41 148 chr17 65379473 65379544 -24125009 - MIR SINE MIR 0 262 218 1602 180 21 0 chr17 65379544 65379828 -24124725 + AluJo SINE Alu 21 310 -2 499 160 41 148 chr17 65379828 65379925 -24124628 - MIR SINE MIR -44 218 112 1567 192 8 0 chr17 65380307 65380568 -24123985 - AluJb SINE Alu -29 283 21 426 295 90 12 chr17 65381413 65381579 -24122974 + MIR SINE MIR 14 192 -70 189 0 0 0 chr17 65382226 65382247 -24122306 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1415 216 31 31 chr17 65382289 65382778 -24121775 - L1MB7 LINE L1 -10 6174 5531 401 0 0 20 chr17 65382824 65382874 -24121679 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1275 156 144 32 chr17 65382874 65383124 -24121429 - AluJo SINE Alu -34 278 1 3990 190 68 20 chr17 65383141 65384095 -24120458 - L1MB5 LINE L1 -9 6976 5965 1745 150 58 10 chr17 65384095 65384229 -24120324 + AluJo SINE Alu 2 128 -184 2250 103 3 7 chr17 65384229 65384531 -24120022 + AluSx SINE Alu 1 301 -11 1745 150 58 10 chr17 65384531 65384690 -24119863 + AluJo SINE Alu 128 309 -3 3990 190 68 20 chr17 65384690 65384757 -24119796 - L1MB5 LINE L1 -1020 5965 5903 2606 205 87 53 chr17 65384780 65385426 -24119127 - L1MB5 LINE L1 -4736 2223 1601 180 77 0 0 chr17 65385426 65385452 -24119101 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2124 91 7 14 chr17 65385454 65385739 -24118814 - AluSx SINE Alu -25 287 5 2606 205 87 53 chr17 65385739 65386132 -24118421 - L1MB5 LINE L1 -5358 1601 1144 380 169 13 0 chr17 65386143 65386220 -24118333 + GA-rich Low_complexity Low_complexity 1 78 0 640 347 88 35 chr17 65386271 65386707 -24117846 - L1MB5 LINE L1 -5758 1097 605 2165 117 0 3 chr17 65386707 65387005 -24117548 - AluSx SINE Alu -15 297 1 640 347 88 35 chr17 65387005 65387306 -24117247 - L1MB5 LINE L1 -6250 605 321 3534 223 75 45 chr17 65387314 65387817 -24116736 - L1ME LINE L1 -728 5940 5454 890 187 0 50 chr17 65387817 65387999 -24116554 - FAM SINE Alu -2 173 1 3534 223 75 45 chr17 65387999 65388119 -24116434 - L1ME LINE L1 -1214 5454 5339 1906 149 20 0 chr17 65388119 65388414 -24116139 - AluSx SINE Alu -11 301 1 3534 223 75 45 chr17 65388414 65389191 -24115362 - L1ME LINE L1 -1329 5339 4514 1800 131 4 11 chr17 65389299 65389566 -24114987 - AluSg SINE Alu -45 265 1 807 70 0 0 chr17 65389566 65389681 -24114872 - L1 LINE L1 -1310 4836 4722 1627 261 105 49 chr17 65389683 65391012 -24113541 - L1ME LINE L1 -4727 1919 564 672 280 60 9 chr17 65391208 65391426 -24113127 - L1MB5 LINE L1 -6620 239 11 259 317 134 49 chr17 65391716 65391858 -24112695 + MIR SINE MIR 51 204 -58 711 205 0 16 chr17 65392251 65392378 -24112175 + FLAM_A SINE Alu 1 125 -8 354 145 0 43 chr17 65392487 65392523 -24112030 + MER41A LTR ERV1 401 434 -120 2084 146 7 0 chr17 65392523 65392825 -24111728 - AluJb SINE Alu -8 304 1 354 145 0 43 chr17 65392825 65392857 -24111696 + MER41A LTR ERV1 434 466 -88 26 0 0 0 chr17 65392857 65392883 -24111670 + AT_rich Low_complexity Low_complexity 1 26 0 2185 106 0 3 chr17 65395066 65395376 -24109177 + AluSx SINE Alu 1 309 0 21 36 0 0 chr17 65395434 65395462 -24109091 + AT_rich Low_complexity Low_complexity 1 28 0 1699 184 7 7 chr17 65396001 65396326 -24108227 + AluJb SINE Alu 1 312 0 24 32 0 0 chr17 65396388 65396419 -24108134 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 65396631 65396653 -24107900 + AT_rich Low_complexity Low_complexity 1 22 0 2119 112 0 7 chr17 65396872 65397168 -24107385 - AluSg SINE Alu -4 306 13 788 142 8 22 chr17 65397641 65397775 -24106778 + FLAM_A SINE Alu 2 133 0 1334 160 36 9 chr17 65398039 65398258 -24106295 + MER6 DNA MER2_type 1 225 -640 538 230 56 47 chr17 65398635 65398916 -24105637 - LTR45 LTR ERV1 -1 593 324 1230 154 96 81 chr17 65399090 65399362 -24105191 - AluJo SINE Alu -30 282 7 3914 135 58 6 chr17 65400992 65401627 -24102926 + MER6 DNA MER2_type 198 865 0 2213 98 17 7 chr17 65401821 65402116 -24102437 + AluSq SINE Alu 1 298 -15 2162 123 10 0 chr17 65402947 65403256 -24101297 + AluSx SINE Alu 1 312 0 2209 116 0 0 chr17 65403780 65404074 -24100479 - AluSq SINE Alu -19 294 1 1617 212 3 0 chr17 65404537 65404830 -24099723 - AluJb SINE Alu -18 294 1 1893 141 20 3 chr17 65405826 65406125 -24098428 + AluJo SINE Alu 7 310 -2 1947 133 10 13 chr17 65406157 65406465 -24098088 + AluSx SINE Alu 1 307 -5 791 205 30 35 chr17 65406487 65406687 -24097866 - L1ME3 LINE L1 -100 6062 5864 266 273 127 18 chr17 65406809 65406919 -24097634 + L3 LINE CR1 1390 1511 -66 739 189 0 0 chr17 65407148 65407280 -24097273 - FLAM_C SINE Alu -11 132 1 2122 129 0 10 chr17 65408063 65408238 -24096315 - AluSx SINE Alu -4 308 136 2207 107 3 0 chr17 65408238 65408536 -24096017 - AluY SINE Alu -12 299 1 2122 129 0 10 chr17 65408536 65408671 -24095882 - AluSx SINE Alu -176 136 1 2132 101 10 3 chr17 65408708 65408996 -24095557 + AluSg SINE Alu 1 290 -20 2240 89 24 0 chr17 65409109 65409401 -24095152 - AluSg SINE Alu -11 299 1 2107 127 7 0 chr17 65409401 65409693 -24094860 - AluSx SINE Alu -18 294 1 1762 176 0 44 chr17 65409869 65410188 -24094365 + AluJo SINE Alu 1 305 -7 299 278 70 43 chr17 65411936 65412051 -24092502 - MIR3 SINE MIR -48 160 43 2302 100 3 0 chr17 65412126 65412425 -24092128 + AluSp SINE Alu 3 302 -11 206 328 17 0 chr17 65412436 65412494 -24092059 - L3b LINE CR1 -13 1570 1512 239 292 34 22 chr17 65412692 65412781 -24091772 - MIR SINE MIR -65 143 54 1932 156 0 22 chr17 65413383 65413697 -24090856 - AluJo SINE Alu -5 307 1 220 341 210 7 chr17 65413718 65413856 -24090697 + L2 LINE L2 3106 3271 -1 2420 280 90 48 chr17 65414093 65414546 -24090007 + L1MEc LINE L1 20 452 -5944 1902 150 0 26 chr17 65414546 65414859 -24089694 - AluSx SINE Alu -7 305 1 2420 280 90 48 chr17 65414859 65415259 -24089294 + L1MEc LINE L1 452 834 -5562 2382 84 0 7 chr17 65415259 65415567 -24088986 + AluSx SINE Alu 1 306 -6 2420 280 90 48 chr17 65415567 65416360 -24088193 + L1MEc LINE L1 834 1737 -4659 199 264 0 19 chr17 65416385 65416438 -24088115 + L2 LINE L2 2707 2758 -556 * 838 246 97 47 chr17 65416406 65416748 -24087805 + L2 LINE L2 2953 3311 -2 2257 112 0 0 chr17 65416756 65417061 -24087492 + AluSx SINE Alu 1 305 -7 1299 126 0 6 chr17 65417301 65417483 -24087070 - AluSg/x SINE Alu -20 292 112 755 185 0 0 chr17 65417678 65417797 -24086756 + FLAM_C SINE Alu 1 119 -24 228 67 0 0 chr17 65418519 65418549 -24086004 + (TA)n Simple_repeat Simple_repeat 1 30 0 1621 156 60 11 chr17 65419500 65419783 -24084770 - AluJo SINE Alu -13 299 3 226 349 24 0 chr17 65419811 65419894 -24084659 - L2 LINE L2 -2 3311 3227 1660 145 78 7 chr17 65420801 65421083 -24083470 + AluJb SINE Alu 3 304 -8 1833 152 0 0 chr17 65421136 65421458 -24083095 + AluJb SINE Alu 1 322 0 2265 98 0 0 chr17 65421671 65421978 -24082575 - AluSq SINE Alu 0 307 1 2247 92 7 3 chr17 65422838 65423132 -24081421 + AluSg SINE Alu 1 295 -15 513 225 62 16 chr17 65423181 65423310 -24081243 - MIR SINE MIR -63 199 65 414 312 97 19 chr17 65423355 65423509 -24081044 + MER5A DNA MER1_type 1 166 -23 2259 103 0 0 chr17 65423942 65424233 -24080320 - AluSc SINE Alu -18 291 1 256 352 110 30 chr17 65425272 65425735 -24078818 - L2 LINE L2 -920 2394 1895 2262 98 0 25 chr17 65425784 65426101 -24078452 - AluSg SINE Alu -1 309 1 1173 155 43 78 chr17 65426310 65426675 -24077878 + MER31B LTR ERV1 1 466 0 2097 139 3 0 chr17 65427438 65427740 -24076813 + AluSx SINE Alu 3 305 -7 931 227 178 39 chr17 65427808 65428095 -24076458 + MLT1C LTR MaLR 1 247 -220 3340 168 54 65 chr17 65428095 65428449 -24076104 + LTR39 LTR ERV1 1 357 -426 2133 106 0 7 chr17 65428449 65428732 -24075821 + AluSx SINE Alu 3 283 -29 180 0 0 0 chr17 65428732 65428752 -24075801 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3340 168 54 65 chr17 65428752 65429187 -24075366 + LTR39 LTR ERV1 355 783 0 931 227 178 39 chr17 65429187 65429309 -24075244 + MLT1C LTR MaLR 247 467 0 2451 78 0 3 chr17 65429413 65429722 -24074831 + AluY SINE Alu 1 308 -3 1499 155 22 58 chr17 65429727 65430004 -24074549 + AluJb SINE Alu 1 267 -45 2552 61 0 3 chr17 65430578 65430889 -24073664 - AluY SINE Alu -1 310 1 992 204 58 4 chr17 65431609 65431948 -24072605 + MER65C LTR ERV1 1 466 -65 350 171 171 0 chr17 65432084 65432172 -24072381 + HsTC2 DNA Tc2 21 1841 -57 987 221 86 34 chr17 65432172 65432439 -24072114 + MER21B LTR ERV1 1 281 -582 422 127 0 0 chr17 65432457 65432520 -24072033 + MER21B LTR ERV1 633 695 -168 695 286 81 5 chr17 65432548 65432758 -24071795 - MIR SINE MIR -16 246 21 384 22 0 0 chr17 65433109 65433154 -24071399 + (TG)n Simple_repeat Simple_repeat 2 46 0 527 261 65 43 chr17 65433367 65433597 -24070956 + L2 LINE L2 712 946 -2368 2412 278 100 34 chr17 65433598 65434779 -24069774 + L2 LINE L2 1895 3150 -163 264 221 15 61 chr17 65435120 65435251 -24069302 + L1MEd LINE L1 61 185 -5934 763 161 0 0 chr17 65435669 65435787 -24068766 - FLAM_C SINE Alu -15 118 1 234 0 0 0 chr17 65435965 65435991 -24068562 + (TG)n Simple_repeat Simple_repeat 2 27 0 433 290 148 26 chr17 65436542 65436983 -24067570 + L1ME2 LINE L1 5423 5911 -210 2258 184 65 21 chr17 65436983 65437510 -24067043 + MER44D DNA MER2_type 1 605 0 1832 194 80 14 chr17 65437791 65438229 -24066324 + MLT1C LTR MaLR 1 467 0 529 187 28 9 chr17 65438291 65438398 -24066155 + MER2 DNA MER2_type 1 109 -236 1551 118 38 77 chr17 65438398 65438698 -24065855 + MER49 LTR ERV1 4 291 -632 1860 157 11 4 chr17 65438698 65438979 -24065574 + AluJo SINE Alu 2 284 -28 1551 118 38 77 chr17 65438979 65439018 -24065535 + MER49 LTR ERV1 291 330 -593 2288 98 27 0 chr17 65439018 65439314 -24065239 - AluSx SINE Alu 0 312 9 2643 146 12 100 chr17 65439358 65440009 -24064544 + MER49 LTR ERV1 330 923 0 669 111 0 0 chr17 65440009 65440117 -24064436 + MER2 DNA MER2_type 103 210 -135 410 257 59 10 chr17 65440143 65440244 -24064309 - AluJo SINE Alu -86 226 121 244 275 11 11 chr17 65440338 65440429 -24064124 + L1ME2 LINE L1 6028 6118 -46 1530 178 0 46 chr17 65440434 65440715 -24063838 + AluJo SINE Alu 13 280 -32 253 151 0 27 chr17 65440757 65440830 -24063723 + L1MA10 LINE L1 6262 6332 -2 1925 187 17 37 chr17 65440835 65441237 -24063316 - MSTD LTR MaLR -2 394 1 1993 137 42 31 chr17 65441313 65441671 -24062882 - MLT1A1 LTR MaLR -3 362 1 4112 172 16 23 chr17 65442244 65443109 -24061444 - L1MB7 LINE L1 -1 6183 5325 1456 122 138 77 chr17 65443500 65443687 -24060866 + MER47A DNA MER2_type 20 238 -2085 1933 109 7 48 chr17 65443687 65444024 -24060529 - AluSx SINE Alu 0 325 1 1456 122 138 77 chr17 65444024 65444162 -24060391 + MER47A DNA MER2_type 238 366 0 325 289 0 0 chr17 65444478 65444561 -24059992 - L2 LINE L2 0 3313 3231 28 0 0 0 chr17 65444611 65444639 -24059914 + AT_rich Low_complexity Low_complexity 1 28 0 310 296 20 0 chr17 65444920 65445018 -24059535 + L1MCc LINE L1 814 913 -5510 463 217 203 24 chr17 65445052 65445347 -24059206 + L1MCc LINE L1 1035 1382 -5041 925 262 63 49 chr17 65445476 65446256 -24058297 + L1MCc LINE L1 1713 2704 -4418 636 307 74 13 chr17 65446428 65446659 -24057894 - MIR SINE MIR -3 259 15 2640 138 14 21 chr17 65446684 65447113 -24057440 - MSTB LTR MaLR 0 426 1 180 111 0 0 chr17 65447659 65447686 -24056867 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 2274 114 0 0 chr17 65447933 65448230 -24056323 + AluSx SINE Alu 1 297 -15 3179 136 12 28 chr17 65448256 65448667 -24055886 + L1MA4 LINE L1 4135 4534 -1612 2288 109 6 3 chr17 65448667 65448978 -24055575 - AluSx SINE Alu 0 312 1 3179 136 12 28 chr17 65448978 65449220 -24055333 + L1MA4 LINE L1 4534 4778 -1368 3008 167 56 44 chr17 65449222 65450034 -24054519 + LTR1 LTR ERV1 9 821 -5 2710 143 50 68 chr17 65450041 65450223 -24054330 + L1MA4 LINE L1 4774 4958 -1342 2228 117 3 3 chr17 65450223 65450523 -24054030 + AluSx SINE Alu 1 300 -12 2710 143 50 68 chr17 65450523 65450923 -24053630 + L1MA4 LINE L1 4958 5364 -936 1632 173 0 7 chr17 65450923 65451194 -24053359 + AluJb SINE Alu 29 297 -15 2710 143 50 68 chr17 65451194 65451341 -24053212 + L1MA4 LINE L1 5364 5512 -788 2155 134 7 0 chr17 65451341 65451648 -24052905 + AluSg SINE Alu 1 309 -1 2710 143 50 68 chr17 65451648 65451996 -24052557 + L1MA4 LINE L1 5512 5850 -450 2150 116 3 0 chr17 65451996 65452288 -24052265 + AluSc SINE Alu 1 293 -16 2710 143 50 68 chr17 65452288 65452331 -24052222 + L1MA4 LINE L1 5850 5892 -408 970 148 7 0 chr17 65452331 65452473 -24052080 + AluJb SINE Alu 1 143 -169 1420 188 67 18 chr17 65452473 65452861 -24051692 + L1MA4 LINE L1 5892 6298 -2 2217 112 0 7 chr17 65453118 65453421 -24051132 + AluSq SINE Alu 1 301 -12 362 304 10 20 chr17 65453579 65453681 -24050872 + MIR SINE MIR 25 125 -137 988 190 0 76 chr17 65453986 65454233 -24050320 - AluJb SINE Alu 0 317 87 2279 103 0 28 chr17 65454539 65454858 -24049695 + AluSx SINE Alu 1 310 -2 563 278 102 50 chr17 65455146 65455706 -24048847 + L1MEc LINE L1 466 995 -5401 1997 138 0 19 chr17 65455706 65456018 -24048535 - AluJb SINE Alu -6 306 1 563 278 102 50 chr17 65456018 65456553 -24048000 + L1MEc LINE L1 995 1618 -4778 1735 179 96 20 chr17 65456590 65456691 -24047862 + L1MB4 LINE L1 5383 5475 -705 2225 98 0 28 chr17 65456691 65457008 -24047545 + AluSx SINE Alu 1 308 -4 1735 179 96 20 chr17 65457008 65457314 -24047239 + L1MB4 LINE L1 5475 5821 -359 2086 134 3 0 chr17 65458134 65458439 -24046114 + AluSq SINE Alu 1 306 -7 1299 157 5 142 chr17 65458439 65458807 -24045746 + L1MB4 LINE L1 5818 6131 -52 2033 143 0 7 chr17 65458807 65459108 -24045445 + AluJb SINE Alu 1 299 -13 1299 157 5 142 chr17 65459108 65459133 -24045420 + L1MB4 LINE L1 6131 6158 -25 1131 201 85 5 chr17 65459134 65459358 -24045195 + AluJo SINE Alu 27 268 -44 1532 130 4 0 chr17 65459359 65459590 -24044963 + AluSg/x SINE Alu 79 310 0 624 256 97 23 chr17 65459593 65459851 -24044702 + L3 LINE CR1 608 884 -693 1980 158 18 8 chr17 65460463 65460850 -24043703 + L1MB4 LINE L1 5789 6179 -1 2086 142 0 6 chr17 65461071 65461382 -24043171 + AluJb SINE Alu 1 309 -3 967 152 61 0 chr17 65461385 65461582 -24042971 - MER2 DNA MER2_type -136 209 1 3135 144 60 31 chr17 65461695 65462280 -24042273 - MER6A DNA MER2_type -3 602 1 291 182 36 0 chr17 65462423 65462478 -24042075 - MLT1D LTR MaLR -447 58 2 637 282 33 47 chr17 65462860 65463311 -24041242 + L1MDb LINE L1 775 1219 -5190 714 172 8 30 chr17 65463751 65463885 -24040668 - FLAM_A SINE Alu -2 131 1 21 82 0 0 chr17 65464034 65464083 -24040470 + AT_rich Low_complexity Low_complexity 1 49 0 2951 158 96 29 chr17 65464494 65465215 -24039338 + L1MB8 LINE L1 5410 6178 0 1751 175 7 11 chr17 65465574 65465859 -24038694 + AluJo SINE Alu 1 284 -28 180 0 0 0 chr17 65465859 65465879 -24038674 + (TA)n Simple_repeat Simple_repeat 2 21 0 2196 111 3 3 chr17 65466296 65466594 -24037959 + AluSp SINE Alu 1 298 -15 464 179 73 67 chr17 65466633 65466714 -24037839 + HAL1 LINE L1 2013 2092 -415 2032 142 0 22 chr17 65466714 65467025 -24037528 + AluSx SINE Alu 8 311 -1 464 179 73 67 chr17 65467025 65467122 -24037431 + HAL1 LINE L1 2092 2192 -315 21 0 0 0 chr17 65467191 65467212 -24037341 + AT_rich Low_complexity Low_complexity 1 21 0 1708 155 0 8 chr17 65467220 65467485 -24037068 + AluJo SINE Alu 1 263 -49 520 176 0 0 chr17 65467485 65467576 -24036977 + AluSg/x SINE Alu 217 307 -2 317 256 100 19 chr17 65467576 65467736 -24036817 + HAL1 LINE L1 2329 2501 -6 2089 117 40 0 chr17 65467876 65468174 -24036379 - AluSq SINE Alu -3 310 1 1745 155 22 14 chr17 65468458 65468813 -24035740 + L1MA5 LINE L1 5895 6252 -48 289 214 14 0 chr17 65468813 65468883 -24035670 + MER52A LTR ERV1 1 71 -1684 5400 202 67 55 chr17 65468993 65470674 -24033879 + MER52A LTR ERV1 55 1755 0 21 57 0 0 chr17 65470686 65470721 -24033832 + AT_rich Low_complexity Low_complexity 1 35 0 862 145 8 0 chr17 65471052 65471183 -24033370 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr17 65471568 65471589 -24032964 + AT_rich Low_complexity Low_complexity 1 21 0 345 157 24 12 chr17 65472011 65472094 -24032459 + CT-rich Low_complexity Low_complexity 1 84 0 1399 179 0 0 chr17 65472115 65472338 -24032215 - AluJo SINE Alu -5 307 85 1927 163 3 3 chr17 65472859 65473159 -24031394 + AluJb SINE Alu 1 300 -12 1739 166 42 3 chr17 65473203 65473492 -24031061 + AluJb SINE Alu 1 300 -12 1787 141 16 49 chr17 65473536 65473841 -24030712 + AluJb SINE Alu 1 295 -17 571 225 29 58 chr17 65473841 65473941 -24030612 - L1ME2 LINE L1 -50 6116 6015 2363 82 0 0 chr17 65473941 65474233 -24030320 + AluSq SINE Alu 1 292 -21 571 225 29 58 chr17 65474233 65474471 -24030082 - L1ME2 LINE L1 -151 6015 5801 941 165 92 0 chr17 65474674 65474892 -24029661 - Tigger2 DNA MER2_type 0 2718 2481 2130 125 7 3 chr17 65474893 65475198 -24029355 + AluSx SINE Alu 1 306 -6 255 215 11 32 chr17 65475231 65475324 -24029229 + GA-rich Low_complexity Low_complexity 1 91 0 3717 151 47 3 chr17 65475402 65476085 -24028468 - Tigger2 DNA MER2_type -1961 757 45 1599 39 0 0 chr17 65476085 65476290 -24028263 + AluY SINE Alu 100 304 0 362 164 0 0 chr17 65476334 65476389 -24028164 + MER8 DNA MER2_type 185 239 0 981 61 0 0 chr17 65476419 65476534 -24028019 - AluSg SINE Alu -195 115 1 1527 160 71 14 chr17 65476562 65476844 -24027709 - AluJo SINE Alu -14 298 1 225 260 0 0 chr17 65476844 65476894 -24027659 + Zaphod DNA AcHobo 3982 4031 0 2818 16 0 3 chr17 65478009 65478319 -24026234 + AluYa5 SINE Alu 1 309 -2 1693 153 11 21 chr17 65479170 65479457 -24025096 + AluJb SINE Alu 1 284 -28 1792 170 3 7 chr17 65479617 65479917 -24024636 + AluSx SINE Alu 1 299 -13 1947 156 3 0 chr17 65480024 65480313 -24024240 + AluJb SINE Alu 1 290 -22 2299 113 0 3 chr17 65480475 65480786 -24023767 - AluSx SINE Alu -2 310 1 2384 109 0 0 chr17 65480876 65481178 -24023375 + AluSq SINE Alu 1 302 -11 887 147 0 15 chr17 65481870 65482006 -24022547 + AluJb SINE Alu 2 135 -177 6685 78 3 0 chr17 65482006 65482870 -24021683 - L1P LINE L1 -3757 2389 1523 * 9183 146 167 21 chr17 65482867 65484632 -24019921 - L1P LINE L1 -4115 2031 11 5472 60 1 0 chr17 65484631 65485325 -24019228 + L1P LINE L1 2392 3086 -3060 * 2313 109 0 6 chr17 65485325 65485636 -24018917 + AluSq SINE Alu 1 309 -4 2286 104 0 3 chr17 65485704 65486003 -24018550 - AluSg SINE Alu -12 298 1 1810 148 20 30 chr17 65486026 65486330 -24018223 - AluJo SINE Alu -11 301 1 735 202 0 0 chr17 65486405 65486534 -24018019 - FLAM_A SINE Alu 0 133 5 2039 164 0 0 chr17 65487275 65487587 -24016966 + AluSx SINE Alu 1 312 0 822 155 8 0 chr17 65487691 65487820 -24016733 - FLAM_C SINE Alu -3 130 1 1785 113 79 48 chr17 65488760 65488927 -24015626 - AluSx SINE Alu -12 300 119 2592 57 0 0 chr17 65488927 65489228 -24015325 - AluY SINE Alu -10 301 1 1785 113 79 48 chr17 65489228 65489351 -24015202 - AluSx SINE Alu -193 119 1 2513 58 0 0 chr17 65489416 65489710 -24014843 + AluY SINE Alu 1 294 -17 1904 144 31 0 chr17 65490068 65490359 -24014194 + AluJb SINE Alu 1 300 -12 234 208 59 10 chr17 65490674 65490775 -24013778 + (TATAA)n Simple_repeat Simple_repeat 2 107 0 2005 127 30 10 chr17 65490873 65491172 -24013381 + AluSx SINE Alu 1 305 -7 685 61 20 0 chr17 65491172 65491271 -24013282 + (TA)n Simple_repeat Simple_repeat 2 102 0 2130 103 31 7 chr17 65491522 65491814 -24012739 + AluSx SINE Alu 1 299 -13 180 277 128 43 chr17 65491832 65491926 -24012627 + L2 LINE L2 3103 3204 -109 347 195 8 102 chr17 65491997 65492083 -24012470 - L1MEd LINE L1 -5088 1031 959 1833 175 3 13 chr17 65492083 65492398 -24012155 - AluJo SINE Alu 0 312 1 347 195 8 102 chr17 65492398 65492439 -24012114 - L1MEd LINE L1 -5160 959 916 1109 165 43 20 chr17 65492453 65492707 -24011846 - L1MB8 LINE L1 0 6178 5919 188 310 14 28 chr17 65493557 65493628 -24010925 + L2 LINE L2 3232 3301 -12 1385 191 31 31 chr17 65493630 65493918 -24010635 + AluJo SINE Alu 1 288 -24 2472 77 0 3 chr17 65493971 65494269 -24010284 - AluY SINE Alu -14 297 1 921 126 7 0 chr17 65494294 65494429 -24010124 + AluSq/x SINE Alu 1 136 -177 762 188 0 0 chr17 65494560 65494688 -24009865 - FLAM_A SINE Alu -5 128 1 1899 121 23 3 chr17 65494690 65494996 -24009557 - L1MB4 LINE L1 -209 5971 5660 527 200 9 0 chr17 65494996 65495101 -24009452 + MER63 DNA MER1_type 949 1054 -6 1404 188 6 97 chr17 65495236 65495566 -24008987 + AluSp SINE Alu 1 300 -13 2265 178 90 38 chr17 65496265 65496598 -24007955 - LTR39 LTR ERV1 -12 771 400 2207 133 7 3 chr17 65496598 65496906 -24007647 + AluSc SINE Alu 1 309 0 2265 178 90 38 chr17 65496906 65497096 -24007457 - LTR39 LTR ERV1 -383 400 221 859 108 0 0 chr17 65497096 65497207 -24007346 + AluSq/x SINE Alu 1 111 -201 410 279 61 30 chr17 65497307 65497472 -24007081 - MLT1A2 LTR MaLR -204 170 1 344 186 14 0 chr17 65497681 65497751 -24006802 + AluJ/FLAM SINE Alu 13 83 -219 247 351 0 0 chr17 65497765 65497839 -24006714 + L2 LINE L2 2596 2669 -645 772 251 110 80 chr17 65497959 65498358 -24006195 - MLT1J LTR MaLR -2 509 99 2125 107 24 0 chr17 65498775 65499065 -24005488 + AluSx SINE Alu 1 297 -15 184 189 54 0 chr17 65499065 65499102 -24005451 + L2 LINE L2 3266 3304 -9 494 167 0 0 chr17 65499143 65499221 -24005332 + FLAM_A SINE Alu 1 78 -54 632 219 56 94 chr17 65499254 65499596 -24004957 - HAL1 LINE L1 -2076 431 103 867 121 0 8 chr17 65499607 65499739 -24004814 - L1PB3 LINE L1 -9 6145 6015 2169 115 0 0 chr17 65499914 65500201 -24004352 + AluSx SINE Alu 1 287 -25 1719 174 3 7 chr17 65500205 65500493 -24004060 + AluJb SINE Alu 18 304 -8 231 146 0 0 chr17 65500814 65500855 -24003698 + (TA)n Simple_repeat Simple_repeat 1 41 0 1852 53 18 4 chr17 65500957 65501183 -24003370 - AluY SINE Alu -82 229 1 6101 101 1 2 chr17 65501183 65502165 -24002388 - L1PA13 LINE L1 -80 6083 5102 180 0 0 0 chr17 65502221 65502241 -24002312 + (A)n Simple_repeat Simple_repeat 1 20 0 2234 117 0 16 chr17 65502245 65502380 -24002173 + AluSx SINE Alu 1 137 -175 2459 77 3 0 chr17 65502380 65502679 -24001874 + AluSp SINE Alu 1 300 -13 2234 117 0 16 chr17 65502679 65502860 -24001693 + AluSx SINE Alu 137 312 0 2343 94 0 13 chr17 65502882 65503191 -24001362 + AluSq SINE Alu 1 305 -8 735 165 39 0 chr17 65503193 65503320 -24001233 + FLAM_C SINE Alu 1 132 -11 2244 122 0 0 chr17 65503421 65503717 -24000836 + AluSx SINE Alu 2 297 -15 195 266 0 0 chr17 65503725 65503789 -24000764 + (TA)n Simple_repeat Simple_repeat 2 65 0 2373 94 0 3 chr17 65504500 65504808 -23999745 + AluSc SINE Alu 1 307 -2 414 200 35 24 chr17 65505498 65505583 -23998970 + LTR39 LTR ERV1 1 86 -697 289 128 0 21 chr17 65505595 65505642 -23998911 + LTR39 LTR ERV1 314 359 -424 1034 134 0 6 chr17 65505642 65505799 -23998754 + AluSg/x SINE Alu 157 312 0 869 95 6 145 chr17 65505803 65505909 -23998644 + LTR39 LTR ERV1 68 141 -642 2245 106 0 0 chr17 65505909 65506201 -23998352 + AluSx SINE Alu 1 292 -20 869 95 6 145 chr17 65506201 65506273 -23998280 + LTR39 LTR ERV1 141 221 -562 2268 105 3 3 chr17 65506587 65506882 -23997671 + AluSq SINE Alu 1 295 -18 250 114 0 0 chr17 65507116 65507160 -23997393 - FAM SINE Alu -2 177 134 1802 151 7 13 chr17 65507186 65507485 -23997068 - AluJo SINE Alu -15 297 1 268 161 16 32 chr17 65507485 65507547 -23997006 - L1M4 LINE L1 -5074 1468 1408 536 222 0 0 chr17 65507553 65507652 -23996901 - FRAM SINE Alu -15 161 63 4599 220 57 47 chr17 65507652 65508788 -23995765 - L1M4 LINE L1 -5223 1319 167 1520 164 89 24 chr17 65508788 65509081 -23995472 - AluJb SINE Alu 0 312 1 4599 220 57 47 chr17 65509081 65509233 -23995320 - L1M4 LINE L1 -6375 167 18 1109 196 31 61 chr17 65509312 65509594 -23994959 - L1ME2 LINE L1 -108 6056 5784 1963 135 17 7 chr17 65509594 65509891 -23994662 - AluSx SINE Alu -12 300 1 1109 196 31 61 chr17 65509891 65509934 -23994619 - L1ME2 LINE L1 -380 5784 5741 2110 128 3 0 chr17 65510900 65511196 -23993357 - AluSx SINE Alu -15 297 1 494 229 100 47 chr17 65511256 65511426 -23993127 - MLT1A2 LTR MaLR -5 369 191 1172 118 0 39 chr17 65511528 65511706 -23992847 + AluSg/x SINE Alu 128 298 -12 2622 102 38 102 chr17 65511706 65511941 -23992612 + Tigger3(Golem) DNA MER2_type 2526 2774 -254 1349 171 28 102 chr17 65511941 65512263 -23992290 - AluJo SINE Alu -14 298 1 2622 102 38 102 chr17 65512263 65512274 -23992279 + Tigger3(Golem) DNA MER2_type 2774 2784 -244 1703 139 32 54 chr17 65512274 65512590 -23991963 - AluJo SINE Alu -1 311 3 2622 102 38 102 chr17 65512590 65512841 -23991712 + Tigger3(Golem) DNA MER2_type 2784 2992 -36 981 233 55 44 chr17 65512978 65513339 -23991214 - HAL1 LINE L1 -190 2317 1953 547 189 46 18 chr17 65513426 65513567 -23990986 - L1ME2 LINE L1 -673 5491 5350 2278 111 0 7 chr17 65513567 65513865 -23990688 - AluSx SINE Alu -16 296 1 1572 147 28 89 chr17 65513871 65514197 -23990356 - AluJo SINE Alu -1 311 6 705 155 9 9 chr17 65514210 65514326 -23990227 - FLAM_C SINE Alu -19 124 9 1859 141 26 38 chr17 65514356 65514669 -23989884 - AluJb SINE Alu -3 309 1 28 29 0 0 chr17 65514926 65514961 -23989592 + AT_rich Low_complexity Low_complexity 1 35 0 892 100 0 0 chr17 65514979 65515099 -23989454 + AluSp/q SINE Alu 178 297 -16 1594 150 45 31 chr17 65515109 65515396 -23989157 + AluJo SINE Alu 1 291 -21 798 160 15 0 chr17 65515708 65515839 -23988714 - FLAM_A SINE Alu 0 133 1 2880 3 0 0 chr17 65515855 65516157 -23988396 + AluYa5 SINE Alu 1 302 -9 321 43 43 22 chr17 65517175 65517252 -23987301 + AluSp/q SINE Alu 239 316 0 254 253 24 36 chr17 65517549 65517632 -23986921 - L1ME LINE L1 -459 5662 5581 237 65 0 0 chr17 65517798 65517829 -23986724 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2189 136 0 3 chr17 65519736 65520045 -23984508 - AluSx SINE Alu -2 310 3 1838 159 0 7 chr17 65520045 65520320 -23984233 - AluSx SINE Alu -37 275 1 2466 139 49 12 chr17 65520417 65520826 -23983727 - MSTB LTR MaLR -2 424 1 184 246 18 18 chr17 65520935 65520992 -23983561 + MIR SINE MIR 98 154 -108 2869 158 30 32 chr17 65520993 65521159 -23983394 + LTR26 LTR ERV1 1 166 -437 2038 82 78 0 chr17 65521159 65521429 -23983124 + AluSx SINE Alu 3 293 -19 2869 158 30 32 chr17 65521429 65521789 -23982764 + LTR26 LTR ERV1 166 526 -77 1002 181 0 6 chr17 65521790 65521956 -23982597 - AluJo SINE Alu -66 246 82 373 213 13 0 chr17 65521956 65522031 -23982522 + LTR26 LTR ERV1 528 603 0 2211 176 11 0 chr17 65523746 65524126 -23980427 - MER66A LTR ERV1 -35 443 60 2170 108 17 0 chr17 65524126 65524413 -23980140 - AluSx SINE Alu -20 292 1 1286 183 8 12 chr17 65524416 65524656 -23979897 - L1MC2 LINE L1 -218 6126 5888 264 167 0 0 chr17 65524656 65524704 -23979849 - Charlie1 DNA MER1_type -528 2233 2186 261 227 0 0 chr17 65524731 65524775 -23979778 - Charlie1 DNA MER1_type -2717 44 1 256 340 91 10 chr17 65524817 65525014 -23979539 - MIR SINE MIR -29 233 21 2252 116 3 0 chr17 65525186 65525487 -23979066 - AluSq SINE Alu -11 302 1 24 53 0 0 chr17 65525541 65525579 -23978974 + AT_rich Low_complexity Low_complexity 1 38 0 933 77 0 0 chr17 65525606 65525723 -23978830 - AluSg/x SINE Alu -15 297 181 248 265 20 29 chr17 65526374 65526476 -23978077 + CT-rich Low_complexity Low_complexity 1 101 0 416 128 11 43 chr17 65526514 65526608 -23977945 - AluSp/q SINE Alu -2 311 221 1984 129 4 0 chr17 65526712 65526992 -23977561 - AluSx SINE Alu -31 281 1 225 0 0 0 chr17 65526992 65527017 -23977536 + (T)n Simple_repeat Simple_repeat 1 25 0 2243 124 0 0 chr17 65527342 65527649 -23976904 - AluSx SINE Alu -5 307 1 347 235 38 64 chr17 65527743 65527925 -23976628 + MIR SINE MIR 23 203 -59 202 351 122 8 chr17 65528327 65528458 -23976095 - L2 LINE L2 -4 3268 3123 852 185 48 0 chr17 65528744 65528890 -23975663 + AluJb SINE Alu 55 207 -105 2529 103 52 9 chr17 65528891 65529240 -23975313 - THE1B LTR MaLR 0 364 1 7753 111 15 2 chr17 65529242 65530322 -23974231 - THE1B-int LTR MaLR -2 1578 485 305 82 0 21 chr17 65530958 65531014 -23973539 - THE1B-int LTR MaLR -1087 493 448 2074 90 48 7 chr17 65532937 65533226 -23971327 - AluSg SINE Alu -9 301 1 558 282 6 19 chr17 65533227 65533383 -23971170 + L2 LINE L2 3155 3308 -5 390 270 29 29 chr17 65533407 65533544 -23971009 - MIR SINE MIR -55 153 17 2203 112 10 0 chr17 65533641 65533944 -23970609 - AluSx SINE Alu -6 306 1 2397 54 24 0 chr17 65534212 65534507 -23970046 - AluY SINE Alu -9 302 1 1962 90 0 4 chr17 65534507 65534845 -23969708 - L1P2 LINE L1 -665 5490 5156 1796 156 31 81 chr17 65535071 65535351 -23969202 + MER2 DNA MER2_type 6 299 -46 1778 175 10 0 chr17 65535351 65535643 -23968910 - AluSx SINE Alu -17 295 1 1435 196 34 10 chr17 65535649 65535945 -23968608 - AluJo SINE Alu -9 303 1 1796 156 31 81 chr17 65535945 65536015 -23968538 + MER2 DNA MER2_type 304 345 0 2305 74 0 17 chr17 65536045 65536344 -23968209 + AluY SINE Alu 1 294 -17 736 195 0 0 chr17 65536429 65536552 -23968001 - FLAM_A SINE Alu -10 123 1 2133 107 33 0 chr17 65536606 65536726 -23967827 + AluSp SINE Alu 1 116 -197 2456 80 0 0 chr17 65536726 65537025 -23967528 + AluSg SINE Alu 12 310 0 2133 107 33 0 chr17 65537025 65537204 -23967349 + AluSp SINE Alu 116 310 -3 27 49 0 0 chr17 65537388 65537429 -23967124 + AT_rich Low_complexity Low_complexity 1 41 0 2093 112 0 11 chr17 65537660 65537973 -23966580 - AluSg SINE Alu 0 310 1 1783 166 14 0 chr17 65538497 65538781 -23965772 + AluSx SINE Alu 2 289 -23 2061 155 42 20 chr17 65538826 65539180 -23965373 + MLT1A1 LTR MaLR 1 362 -3 1266 158 117 53 chr17 65539376 65539641 -23964912 + AluJo SINE Alu 4 285 -27 500 52 0 0 chr17 65539641 65539699 -23964854 - Alu SINE Alu -17 295 238 2279 100 3 3 chr17 65539699 65539999 -23964554 - AluSx SINE Alu -12 300 1 26 0 0 0 chr17 65540001 65540027 -23964526 + AT_rich Low_complexity Low_complexity 1 26 0 785 170 7 37 chr17 65540027 65540162 -23964391 - FLAM_C SINE Alu -11 132 2 253 185 36 0 chr17 65541558 65541630 -23962923 + L1MC4a LINE L1 5532 5606 -577 2152 133 0 0 chr17 65542016 65542325 -23962228 - AluSx SINE Alu -3 309 1 2149 104 0 51 chr17 65542476 65542792 -23961761 - AluSx SINE Alu -9 303 4 803 164 31 0 chr17 65543001 65543129 -23961424 + FLAM_A SINE Alu 1 132 -1 35 24 0 0 chr17 65543540 65543582 -23960971 + AT_rich Low_complexity Low_complexity 1 42 0 2394 95 0 0 chr17 65543621 65543925 -23960628 - AluSx SINE Alu -8 304 1 3132 168 60 32 chr17 65543928 65544038 -23960515 - L1MB2 LINE L1 -43 6128 6022 3209 105 78 76 chr17 65544038 65544164 -23960389 - MER1A DNA MER1_type -2173 527 403 1758 154 25 7 chr17 65544164 65544443 -23960110 - AluJb SINE Alu -28 284 1 3209 105 78 76 chr17 65544443 65544842 -23959711 - MER1A DNA MER1_type -2297 403 1 3132 168 60 32 chr17 65544842 65545084 -23959469 - L1MB2 LINE L1 -149 6022 5788 1805 109 18 39 chr17 65545084 65545369 -23959184 - AluJb SINE Alu -33 279 1 3132 168 60 32 chr17 65545369 65545671 -23958882 - L1MB2 LINE L1 -383 5788 5455 243 319 103 26 chr17 65546190 65546306 -23958247 - MIR3 SINE MIR -39 169 45 1280 80 5 27 chr17 65547450 65547637 -23956916 + AluSq SINE Alu 117 299 -14 2095 100 0 65 chr17 65551825 65552134 -23952419 + AluSx SINE Alu 1 289 -23 2404 213 100 28 chr17 65552158 65552909 -23951644 + L1MC4a LINE L1 5679 6483 -1325 361 221 71 88 chr17 65552898 65552974 -23951579 + L1MB4 LINE L1 4827 4903 -1243 * 1983 138 0 16 chr17 65552974 65553285 -23951268 + AluSx SINE Alu 1 306 -6 361 221 71 88 chr17 65553285 65553434 -23951119 + L1MB4 LINE L1 4903 5048 -1098 1027 174 5 11 chr17 65553740 65553924 -23950629 + Tigger6 DNA MER2_type 1414 1596 -1 2204 112 0 13 chr17 65554132 65554446 -23950107 - AluSx SINE Alu -2 310 1 1054 178 0 18 chr17 65554579 65554748 -23949805 - FRAM SINE Alu 0 166 1 32 43 0 0 chr17 65554757 65554803 -23949750 + AT_rich Low_complexity Low_complexity 1 46 0 31 0 0 0 chr17 65554952 65554983 -23949570 + AT_rich Low_complexity Low_complexity 1 31 0 2270 107 10 3 chr17 65555050 65555358 -23949195 - AluSx SINE Alu 0 312 3 923 120 8 8 chr17 65555718 65555851 -23948702 + FLAM_C SINE Alu 1 133 -10 4829 134 51 38 chr17 65556439 65557489 -23947064 + L1MB4 LINE L1 5128 6179 -1 317 143 20 0 chr17 65558755 65558804 -23945749 + 5S rRNA rRNA 1 50 -71 1710 158 0 4 chr17 65558824 65559090 -23945463 + AluJb SINE Alu 1 265 -47 1685 170 3 10 chr17 65559696 65559996 -23944557 + AluJo SINE Alu 1 298 -14 914 225 64 8 chr17 65560283 65560519 -23944034 - L1ME3 LINE L1 -20 6142 5894 859 188 106 6 chr17 65560777 65560937 -23943616 + AluJo SINE Alu 7 182 -130 308 239 28 0 chr17 65560967 65561038 -23943515 + HAL1 LINE L1 2435 2507 0 21 57 0 0 chr17 65561109 65561144 -23943409 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 65561320 65561342 -23943211 + AT_rich Low_complexity Low_complexity 1 22 0 1976 97 42 10 chr17 65561506 65561794 -23942759 + AluSc SINE Alu 1 297 -12 262 247 43 54 chr17 65561950 65562043 -23942510 - L2 LINE L2 0 3313 3222 203 337 54 11 chr17 65562119 65562211 -23942342 - L2 LINE L2 -239 3074 2979 364 327 188 58 chr17 65562329 65562760 -23941793 - L2 LINE L2 -443 2871 2385 2321 84 7 3 chr17 65563066 65563363 -23941190 + AluSp SINE Alu 1 298 -15 854 157 0 15 chr17 65563382 65563516 -23941037 + AluJo/FLAM SINE Alu 1 132 -170 1089 127 6 30 chr17 65563516 65563528 -23941025 + AluSg/x SINE Alu 134 145 -167 2764 106 53 14 chr17 65563528 65563961 -23940592 + LTR7 LTR ERV1 1 450 0 1089 127 6 30 chr17 65563961 65564114 -23940439 + AluSg/x SINE Alu 145 295 -17 2099 118 16 19 chr17 65564116 65564429 -23940124 + AluSq SINE Alu 1 312 -1 27 0 0 0 chr17 65564914 65564941 -23939612 + AT_rich Low_complexity Low_complexity 1 27 0 269 202 17 67 chr17 65566052 65566171 -23938382 - Charlie7 DNA MER1_type -52 2560 2448 1315 152 117 52 chr17 65566221 65566530 -23938023 - MER47A DNA MER2_type -11 355 27 194 286 0 0 chr17 65566614 65566663 -23937890 + L2 LINE L2 3222 3270 -2 315 0 0 0 chr17 65566846 65566881 -23937672 + (CA)n Simple_repeat Simple_repeat 2 36 0 2197 95 7 3 chr17 65567818 65568112 -23936441 + AluSx SINE Alu 1 295 -17 2447 41 3 3 chr17 65568291 65568582 -23935971 + AluY SINE Alu 1 291 -20 296 287 19 19 chr17 65570695 65570803 -23933750 + C-rich Low_complexity Low_complexity 2 109 0 23 0 0 0 chr17 65570970 65570993 -23933560 + GC_rich Low_complexity Low_complexity 1 23 0 1439 205 53 6 chr17 65571509 65571851 -23932702 - L1MB3 LINE L1 -3 6180 5823 705 190 37 25 chr17 65571869 65572032 -23932521 + L1MB3 LINE L1 5650 5814 -366 2416 74 3 0 chr17 65572240 65572538 -23932015 - AluSp SINE Alu -10 303 5 1411 134 159 64 chr17 65573122 65573293 -23931260 - MER7A DNA MER2_type -2696 342 189 2197 96 0 0 chr17 65573293 65573600 -23930953 - AluSx SINE Alu 0 309 3 1411 134 159 64 chr17 65573600 65573741 -23930812 - MER7A DNA MER2_type -2849 189 1 2107 127 16 13 chr17 65574628 65574935 -23929618 - AluJb SINE Alu -4 308 1 414 218 11 58 chr17 65575104 65575191 -23929362 + AluJ/FLAM SINE Alu 2 84 -228 1761 138 4 0 chr17 65575939 65576193 -23928360 - AluJo SINE Alu -30 282 28 1573 181 3 93 chr17 65576641 65576973 -23927580 + AluJo SINE Alu 1 302 0 1682 171 7 11 chr17 65577277 65577564 -23926989 + AluJo SINE Alu 24 309 -3 1789 255 165 43 chr17 65577699 65577931 -23926622 - L2 LINE L2 0 3313 3111 1781 153 0 28 chr17 65577931 65578219 -23926334 + AluJo SINE Alu 1 280 -32 186 43 0 0 chr17 65578220 65578243 -23926310 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1789 255 165 43 chr17 65578243 65578531 -23926022 - L2 LINE L2 -202 3111 2860 2173 127 0 0 chr17 65578531 65578823 -23925730 - AluSx SINE Alu -20 292 1 1789 255 165 43 chr17 65578823 65579295 -23925258 - L2 LINE L2 -453 2860 2195 863 171 5 112 chr17 65579301 65579453 -23925100 + AluSx SINE Alu 5 131 -181 1640 151 11 25 chr17 65579453 65579732 -23924821 + AluJb SINE Alu 20 294 -18 863 171 5 112 chr17 65579732 65579784 -23924769 + AluSx SINE Alu 131 187 -125 1335 59 0 12 chr17 65579785 65579954 -23924599 + AluY SINE Alu 139 305 -6 993 103 0 22 chr17 65580154 65580290 -23924263 + AluSq/x SINE Alu 1 133 -180 2182 137 10 0 chr17 65580799 65581106 -23923447 - AluJb SINE Alu -2 310 1 1258 247 106 82 chr17 65581217 65581579 -23922974 - MLT1G1 LTR MaLR -7 588 211 2442 58 0 20 chr17 65581579 65581874 -23922679 - AluSc SINE Alu -20 289 1 1258 247 106 82 chr17 65581874 65581984 -23922569 - MLT1G1 LTR MaLR -384 211 105 234 302 0 19 chr17 65582175 65582281 -23922272 + L1MC4 LINE L1 7815 7918 -124 1980 158 3 3 chr17 65582316 65582627 -23921926 + AluJb SINE Alu 1 311 -1 398 235 41 0 chr17 65582663 65582761 -23921792 + MLT1G1 LTR MaLR 98 199 -396 557 151 31 64 chr17 65582799 65582936 -23921617 + L1MC4 LINE L1 7671 8042 0 1798 122 52 7 chr17 65583456 65583742 -23920811 + AluSx SINE Alu 5 303 -9 2046 140 3 10 chr17 65583755 65584063 -23920490 - AluSx SINE Alu -6 306 1 1434 177 4 8 chr17 65584089 65584337 -23920216 + AluJb SINE Alu 52 298 -14 1705 183 7 13 chr17 65584431 65584737 -23919816 + AluJb SINE Alu 1 304 -8 1700 148 54 4 chr17 65584760 65585037 -23919516 - AluSx SINE Alu -21 291 1 2362 117 0 0 chr17 65585063 65585371 -23919182 - AluSg SINE Alu -1 309 2 222 37 0 0 chr17 65585371 65585398 -23919155 + (TTTC)n Simple_repeat Simple_repeat 3 29 0 982 339 66 18 chr17 65585462 65586190 -23918363 + L1MEc LINE L1 29 791 -5605 1317 120 0 0 chr17 65586190 65586365 -23918188 + AluSg/x SINE Alu 133 307 -5 2300 113 0 0 chr17 65586374 65586683 -23917870 + AluSx SINE Alu 1 309 -3 744 189 207 0 chr17 65586695 65586912 -23917641 + L1MEc LINE L1 797 1058 -5338 2117 100 0 65 chr17 65587692 65588001 -23916552 + AluSx SINE Alu 1 289 -23 1893 233 95 35 chr17 65588025 65588785 -23915768 + L1MC4a LINE L1 5679 6483 -1325 2281 110 0 3 chr17 65588850 65589151 -23915402 + AluSg SINE Alu 1 300 -10 1905 140 22 32 chr17 65589180 65589495 -23915058 + AluJb SINE Alu 1 312 0 447 257 48 22 chr17 65589498 65589705 -23914848 + L1ME3A LINE L1 5152 5369 -791 479 236 214 27 chr17 65589718 65589938 -23914615 + L1ME3A LINE L1 5713 5973 -197 26 30 0 0 chr17 65590123 65590156 -23914397 + AT_rich Low_complexity Low_complexity 1 33 0 2230 121 0 16 chr17 65590159 65590472 -23914081 - AluSx SINE Alu -4 308 1 1714 159 3 47 chr17 65591332 65591633 -23912920 + AluJo SINE Alu 1 288 -24 230 217 0 0 chr17 65591716 65591762 -23912791 - L2 LINE L2 -17 3255 3210 22 0 0 0 chr17 65591840 65591862 -23912691 + AT_rich Low_complexity Low_complexity 1 22 0 2065 116 28 3 chr17 65591894 65592178 -23912375 - AluSx SINE Alu -21 291 1 1800 167 13 3 chr17 65592230 65592529 -23912024 - AluJb SINE Alu -10 302 1 24 0 0 0 chr17 65592539 65592563 -23911990 + AT_rich Low_complexity Low_complexity 1 24 0 1606 193 35 0 chr17 65592571 65592856 -23911697 - AluJo SINE Alu -17 295 1 348 298 101 17 chr17 65593696 65593874 -23910679 + L1ME LINE L1 5586 5778 -343 260 196 137 69 chr17 65593975 65594077 -23910476 + HAL1b LINE L1 1204 1312 -36 2303 112 0 0 chr17 65594477 65594771 -23909782 - AluSx SINE Alu -18 294 1 288 226 236 0 chr17 65594838 65594944 -23909609 - L1ME4a LINE L1 0 6121 5991 21 36 0 0 chr17 65595041 65595069 -23909484 + GC_rich Low_complexity Low_complexity 1 28 0 6573 72 12 65 chr17 65595120 65597134 -23907419 + SVA Other Other 393 1386 0 790 275 187 4 chr17 65597198 65597449 -23907104 + MLT1K LTR MaLR 2 298 -290 1673 156 152 69 chr17 65597454 65597660 -23906893 + MLT1F1 LTR MaLR 97 285 -282 1970 167 10 0 chr17 65597660 65597966 -23906587 - AluJb SINE Alu -3 309 1 1673 156 152 69 chr17 65597966 65598138 -23906415 + MLT1F1 LTR MaLR 285 519 -48 1956 166 0 0 chr17 65598138 65598445 -23906108 - AluSx SINE Alu 0 307 1 1673 156 152 69 chr17 65598445 65598499 -23906054 + MLT1F1 LTR MaLR 519 567 0 1870 169 0 0 chr17 65598748 65599043 -23905510 + AluJb SINE Alu 1 295 -17 605 189 0 9 chr17 65599373 65599479 -23905074 - FRAM SINE Alu -75 101 1 433 293 104 6 chr17 65599479 65599643 -23904910 + Charlie8 DNA MER1_type 86 265 -2152 2171 138 0 0 chr17 65599925 65600273 -23904280 - AluJb SINE Alu 0 348 1 2321 106 0 3 chr17 65600553 65600864 -23903689 - AluSg SINE Alu 0 310 1 2380 90 3 0 chr17 65600866 65601167 -23903386 - AluSc SINE Alu -7 302 1 364 212 0 12 chr17 65601779 65601864 -23902689 + L2 LINE L2 2451 2534 -780 718 112 19 9 chr17 65601870 65601977 -23902576 + AluJb SINE Alu 4 111 -201 1123 184 163 16 chr17 65601985 65602385 -23902168 - LTR18B LTR ERVL -63 551 1 506 176 0 0 chr17 65602385 65602476 -23902077 + FLAM_A SINE Alu 52 142 0 671 245 68 12 chr17 65602489 65602738 -23901815 + HAL1 LINE L1 1686 1948 -559 3512 117 79 22 chr17 65602745 65603326 -23901227 - LTR18B LTR ERVL 0 614 1 1891 174 10 0 chr17 65603529 65603828 -23900725 - HERVL18 LTR ERVL -2556 3491 3190 1062 84 7 0 chr17 65603828 65603970 -23900583 + AluSg/x SINE Alu 168 310 0 375 105 38 4 chr17 65603974 65604085 -23900468 - HERVL18 LTR ERVL -3768 2279 2119 * 1128 186 20 7 chr17 65604084 65604439 -23900114 - HERVL18 LTR ERVL -4237 1810 1388 895 222 12 0 chr17 65604467 65604638 -23899915 - HERVL18 LTR ERVL -5381 666 494 * 1614 185 3 11 chr17 65604623 65604910 -23899643 - HERVL18 LTR ERVL -5744 303 19 3432 125 78 14 chr17 65604931 65605508 -23899045 - LTR18B LTR ERVL 0 614 1 429 228 103 0 chr17 65605515 65605660 -23898893 + HAL1 LINE L1 1943 2102 -405 2137 104 13 30 chr17 65605687 65605986 -23898567 + AluSq SINE Alu 1 294 -19 266 197 0 16 chr17 65606000 65606061 -23898492 + THE1B LTR MaLR 195 254 -110 31 0 0 0 chr17 65606555 65606586 -23897967 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 65606655 65606676 -23897877 + AT_rich Low_complexity Low_complexity 1 21 0 1286 108 84 117 chr17 65607323 65607656 -23896897 - MER33 DNA MER1_type -2 322 1 1072 154 0 6 chr17 65607664 65607839 -23896714 + MER5A DNA MER1_type 1 174 -15 607 184 0 0 chr17 65608018 65608116 -23896437 - LTR32 LTR ERVL 0 471 374 1001 142 0 0 chr17 65608123 65608264 -23896289 - AluJb SINE Alu -16 296 156 23 0 0 0 chr17 65608276 65608299 -23896254 + AT_rich Low_complexity Low_complexity 1 23 0 1803 132 14 35 chr17 65608328 65608423 -23896130 - LTR32 LTR ERVL -80 391 296 2363 100 0 3 chr17 65608423 65608722 -23895831 + AluSx SINE Alu 1 298 -14 1803 132 14 35 chr17 65608722 65608913 -23895640 - LTR32 LTR ERVL -175 296 111 2071 132 7 0 chr17 65609271 65609558 -23894995 - AluSx SINE Alu -23 289 1 716 143 241 0 chr17 65609953 65610086 -23894467 - AluSg/x SINE Alu -16 296 132 245 27 54 0 chr17 65610086 65610123 -23894430 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2266 87 0 0 chr17 65610123 65610400 -23894153 - AluSc SINE Alu -30 279 3 249 286 0 0 chr17 65610429 65610485 -23894068 - L2 LINE L2 -22 3250 3195 427 293 6 119 chr17 65610782 65610864 -23893689 - L2 LINE L2 -420 2894 2804 1537 164 3 35 chr17 65610864 65611176 -23893377 + AluJo SINE Alu 1 302 -10 2341 95 13 0 chr17 65611176 65611482 -23893071 + AluSq SINE Alu 1 310 -3 427 293 6 119 chr17 65611482 65611544 -23893009 - L2 LINE L2 -509 2805 2738 2338 82 0 0 chr17 65611544 65611835 -23892718 + AluY SINE Alu 1 291 -20 427 293 6 119 chr17 65611835 65612023 -23892530 - L2 LINE L2 -576 2738 2598 1052 179 60 5 chr17 65612351 65612552 -23892001 - AluSg/x SINE Alu -25 285 74 524 209 241 5 chr17 65613212 65613399 -23891154 + MIR SINE MIR 2 232 -30 2316 88 7 0 chr17 65613472 65613766 -23890787 + AluSq SINE Alu 1 296 -17 936 101 0 0 chr17 65613862 65613981 -23890572 + AluSc SINE Alu 16 134 -175 462 256 99 6 chr17 65615037 65615209 -23889344 + LTR16C LTR ERVL 298 485 -6 2135 132 10 0 chr17 65615290 65615586 -23888967 + AluSx SINE Alu 1 299 -13 610 313 41 38 chr17 65615633 65615924 -23888629 + L2 LINE L2 2839 3130 -183 1773 161 3 20 chr17 65616034 65616326 -23888227 + AluJo SINE Alu 1 287 -25 2727 103 99 14 chr17 65616753 65617255 -23887298 + LTR35 LTR ERV1 1 618 0 677 175 0 0 chr17 65617255 65617369 -23887184 + L1MD3 LINE L1 7714 7827 -168 2311 105 0 3 chr17 65617488 65617793 -23886760 + AluSq SINE Alu 3 306 -7 1123 201 75 53 chr17 65618017 65618335 -23886218 + MLT1D LTR MaLR 1 325 -180 2555 221 134 118 chr17 65618335 65618624 -23885929 - L1M4 LINE L1 -4842 1700 1417 1592 150 73 4 chr17 65618624 65618884 -23885669 - AluJo SINE Alu -29 283 6 2555 221 134 118 chr17 65618884 65618900 -23885653 - L1M4 LINE L1 -5125 1417 1403 1885 172 0 0 chr17 65618900 65619191 -23885362 - AluJo SINE Alu -21 291 1 2555 221 134 118 chr17 65619191 65619357 -23885196 - L1M4 LINE L1 -5139 1403 1241 2466 89 3 0 chr17 65619357 65619661 -23884892 - AluSp SINE Alu -8 305 1 2555 221 134 118 chr17 65619661 65619773 -23884780 - L1M4 LINE L1 -5301 1241 1132 2653 61 0 0 chr17 65619773 65620084 -23884469 - AluSq SINE Alu 0 313 3 2555 221 134 118 chr17 65620084 65621132 -23883421 - L1M4 LINE L1 -5410 1132 40 2316 105 0 10 chr17 65621187 65621500 -23883053 - AluSx SINE Alu -2 310 1 2621 55 0 6 chr17 65621518 65621830 -23882723 - AluY SINE Alu -1 310 1 2145 60 102 7 chr17 65621841 65622125 -23882428 - AluY SINE Alu 0 311 1 183 80 0 0 chr17 65622434 65622459 -23882094 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 247 159 0 0 chr17 65622543 65622587 -23881966 - Alu SINE Alu -2 131 88 25 31 0 0 chr17 65622631 65622663 -23881890 + AT_rich Low_complexity Low_complexity 1 32 0 2127 78 0 0 chr17 65622673 65622929 -23881624 - AluSc SINE Alu -53 256 1 518 311 122 49 chr17 65622944 65623348 -23881205 - L1MEd LINE L1 -5326 793 349 2276 109 3 0 chr17 65623348 65623650 -23880903 - AluSx SINE Alu -9 303 1 518 311 122 49 chr17 65623650 65623714 -23880839 - L1MEd LINE L1 -5770 349 291 486 247 99 67 chr17 65623729 65623952 -23880601 - L1MEd LINE L1 -5879 240 11 1418 188 85 4 chr17 65624061 65624332 -23880221 - AluJo SINE Alu -16 296 4 198 0 0 0 chr17 65624857 65624879 -23879674 + (TAA)n Simple_repeat Simple_repeat 1 22 0 2134 119 0 3 chr17 65624950 65625244 -23879309 + AluSx SINE Alu 1 293 -19 328 154 71 0 chr17 65626355 65626428 -23878125 - FLAM_A SINE Alu -6 127 70 2508 62 7 3 chr17 65626527 65626832 -23877721 + AluY SINE Alu 1 306 -5 23 54 0 0 chr17 65626869 65626906 -23877647 + AT_rich Low_complexity Low_complexity 1 37 0 628 140 0 28 chr17 65627246 65627353 -23877200 + FLAM_C SINE Alu 30 133 -10 245 274 0 0 chr17 65628221 65628294 -23876259 + L2 LINE L2 2914 2986 -286 430 189 181 24 chr17 65628388 65628515 -23876038 - MIR SINE MIR -14 248 102 232 306 74 0 chr17 65628510 65628618 -23875935 - L2 LINE L2 -36 3277 3162 * 1339 173 100 19 chr17 65628625 65628913 -23875640 + AluJb SINE Alu 1 309 0 660 279 51 70 chr17 65628916 65629232 -23875321 + MLT1I LTR MaLR 93 402 -7 757 160 32 0 chr17 65629447 65629572 -23874981 + FLAM_C SINE Alu 2 130 -13 1584 171 34 24 chr17 65629699 65629992 -23874561 - AluJb SINE Alu -16 296 1 21 0 0 0 chr17 65630547 65630568 -23873985 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr17 65631008 65631032 -23873521 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 600 319 71 61 chr17 65631399 65631887 -23872666 - L2 LINE L2 -89 3224 2697 933 184 84 0 chr17 65631887 65632077 -23872476 + MER3 DNA MER1_type 3 208 -1 600 319 71 61 chr17 65632077 65632178 -23872375 - L2 LINE L2 -616 2697 2599 2084 85 15 15 chr17 65632932 65633204 -23871349 + AluSc SINE Alu 28 299 -10 3339 148 81 93 chr17 65633277 65634118 -23870435 - L1MB4 LINE L1 0 6180 5330 1845 153 7 29 chr17 65634118 65634425 -23870128 - AluJo SINE Alu -12 300 1 3339 148 81 93 chr17 65634425 65634457 -23870096 - L1MB4 LINE L1 -850 5330 5299 1553 87 5 0 chr17 65634457 65634652 -23869901 - AluSq SINE Alu -33 280 85 2245 106 0 20 chr17 65634653 65634956 -23869597 - AluSx SINE Alu -15 297 1 3339 148 81 93 chr17 65634956 65635121 -23869432 - L1MB4 LINE L1 -880 5300 5140 2828 222 29 61 chr17 65635128 65635703 -23868850 - L1MB4 LINE L1 -1945 4201 3668 2271 110 3 0 chr17 65635703 65636011 -23868542 + AluSq SINE Alu 1 309 -4 2828 222 29 61 chr17 65636011 65636424 -23868129 - L1MB4 LINE L1 -2478 3668 3244 22 25 0 25 chr17 65637377 65637394 -23867159 + AT_rich Low_complexity Low_complexity 1 17 -22 828 143 8 15 chr17 65637394 65637527 -23867026 + FLAM_C SINE Alu 1 132 -1 22 25 0 25 chr17 65637527 65637549 -23867004 + AT_rich Low_complexity Low_complexity 17 39 0 21 36 0 0 chr17 65637562 65637590 -23866963 + AT_rich Low_complexity Low_complexity 1 28 0 2249 101 7 13 chr17 65638027 65638335 -23866218 - AluSq SINE Alu -7 306 1 339 152 45 0 chr17 65638456 65638522 -23866031 - Tigger4(Zombi) DNA MER2_type 0 2731 2663 227 200 0 0 chr17 65638498 65638538 -23866015 - Tigger4(Zombi) DNA MER2_type -2691 40 1 * 37 52 0 0 chr17 65638748 65638806 -23865747 + AT_rich Low_complexity Low_complexity 1 58 0 2226 105 13 3 chr17 65638808 65639114 -23865439 + AluY SINE Alu 1 309 -2 225 94 0 0 chr17 65639123 65639155 -23865398 + (ACATG)n Simple_repeat Simple_repeat 5 36 0 721 157 0 0 chr17 65639157 65639265 -23865288 - FLAM_C SINE Alu -35 108 1 378 0 0 0 chr17 65639509 65639551 -23865002 + (CA)n Simple_repeat Simple_repeat 2 43 0 30 27 0 0 chr17 65640365 65640402 -23864151 + AT_rich Low_complexity Low_complexity 1 37 0 627 179 125 0 chr17 65640627 65640739 -23863814 - FLAM_C SINE Alu -17 126 1 21 0 0 0 chr17 65641532 65641553 -23863000 + AT_rich Low_complexity Low_complexity 1 21 0 737 180 8 0 chr17 65641719 65641847 -23862706 + FLAM_C SINE Alu 1 129 -4 23 0 0 0 chr17 65641848 65641871 -23862682 + AT_rich Low_complexity Low_complexity 1 23 0 340 197 49 0 chr17 65642390 65642451 -23862102 + L2 LINE L2 3208 3271 -1 2178 99 45 3 chr17 65642500 65642792 -23861761 + AluSx SINE Alu 1 304 -8 287 332 100 58 chr17 65643654 65643895 -23860658 - MIR SINE MIR -4 258 8 1336 150 0 18 chr17 65644031 65644257 -23860296 + AluJb SINE Alu 81 302 -10 777 239 116 29 chr17 65644553 65645145 -23859408 + LTR50 LTR ERVL 1 684 -111 826 155 0 8 chr17 65645169 65645298 -23859255 + FLAM_C SINE Alu 1 128 -5 2332 79 10 0 chr17 65645749 65646041 -23858512 - AluSp SINE Alu -18 295 1 33109 76 12 9 chr17 65646313 65647259 -23857294 - L1PA6 LINE L1 -4 6150 5209 2410 78 0 0 chr17 65647259 65647553 -23857000 - AluY SINE Alu -17 294 1 33109 76 12 9 chr17 65647553 65652188 -23852365 - L1PA6 LINE L1 -945 5209 550 24 0 0 0 chr17 65652189 65652213 -23852340 + AT_rich Low_complexity Low_complexity 1 24 0 1092 174 42 4 chr17 65652219 65652460 -23852093 + L1MB8 LINE L1 5840 6089 -89 267 27 0 27 chr17 65654031 65654068 -23850485 - AluY SINE Alu -255 47 12 878 281 108 11 chr17 65654125 65654598 -23849955 - L1M4 LINE L1 -891 5255 4737 248 167 37 0 chr17 65654677 65654731 -23849822 - L1M LINE L1 -763 5399 5344 1369 209 81 7 chr17 65654868 65655151 -23849402 - AluSx SINE Alu -8 304 1 444 37 0 0 chr17 65655151 65655205 -23849348 + (TG)n Simple_repeat Simple_repeat 2 55 0 590 180 0 0 chr17 65655219 65655308 -23849245 - AluJ/FLAM SINE Alu -223 89 1 225 0 0 0 chr17 65655308 65655333 -23849220 + (TG)n Simple_repeat Simple_repeat 1 25 0 1475 162 68 8 chr17 65655342 65655608 -23848945 - AluJo SINE Alu -30 282 1 1658 180 0 14 chr17 65655778 65656067 -23848486 - AluJo SINE Alu -27 285 1 658 187 37 30 chr17 65656129 65656263 -23848290 + AluJo SINE Alu 1 135 -177 945 189 0 12 chr17 65656316 65656485 -23848068 + AluJo SINE Alu 132 298 -14 252 73 0 0 chr17 65656586 65656627 -23847926 - Alu SINE Alu 0 302 262 591 104 87 104 chr17 65656728 65656843 -23847710 - AluSq/x SINE Alu -198 115 3 547 161 0 0 chr17 65656874 65656961 -23847592 + FRAM SINE Alu 72 158 -18 2189 117 0 3 chr17 65656969 65657267 -23847286 + AluSg SINE Alu 1 297 -13 2170 131 0 6 chr17 65657357 65657669 -23846884 + AluSx SINE Alu 1 310 -2 2039 131 3 0 chr17 65657782 65658099 -23846454 + AluSx SINE Alu 1 318 0 894 219 53 47 chr17 65658118 65658419 -23846134 + L1MD2 LINE L1 6052 6354 -5 1674 158 59 33 chr17 65658431 65658652 -23845901 + AluJo SINE Alu 1 215 -97 2165 110 53 34 chr17 65658652 65659007 -23845546 + THE1B LTR MaLR 1 362 -2 11441 102 4 12 chr17 65659009 65659440 -23845113 + THE1B-int LTR MaLR 1 434 -1146 2014 123 3 69 chr17 65659440 65659772 -23844781 - AluSq SINE Alu -3 310 1 11441 102 4 12 chr17 65659772 65660933 -23843620 + THE1B-int LTR MaLR 434 1580 0 2171 126 42 25 chr17 65660933 65661291 -23843262 + THE1B LTR MaLR 1 364 0 1674 158 59 33 chr17 65661291 65661369 -23843184 + AluJo SINE Alu 214 312 0 872 155 0 0 chr17 65661531 65661660 -23842893 - FLAM_C SINE Alu -4 129 1 1978 141 20 7 chr17 65661660 65661964 -23842589 - AluSx SINE Alu -4 308 1 358 279 57 7 chr17 65661998 65662138 -23842415 - MIR SINE MIR -56 206 60 578 271 79 19 chr17 65662141 65662355 -23842198 + MIR SINE MIR 2 228 -34 2263 113 0 13 chr17 65663001 65663312 -23841241 - AluSc SINE Alu -2 307 1 642 154 31 0 chr17 65663312 65663442 -23841111 + L1MB7 LINE L1 5332 5465 -713 830 181 19 25 chr17 65663454 65663671 -23840882 - FRAM SINE Alu 0 208 1 2472 174 71 52 chr17 65663675 65664335 -23840218 + L1MB7 LINE L1 5494 6166 -18 22 0 0 0 chr17 65664624 65664646 -23839907 + AT_rich Low_complexity Low_complexity 1 22 0 1927 123 0 20 chr17 65664755 65665056 -23839497 - AluSx SINE Alu -17 295 1 523 225 17 116 chr17 65665057 65665167 -23839386 + L2 LINE L2 3158 3247 -66 2937 112 40 29 chr17 65665167 65665694 -23838859 + L1MA3 LINE L1 5772 6304 -1 523 225 17 116 chr17 65665694 65665756 -23838797 + L2 LINE L2 3247 3313 0 1770 143 45 7 chr17 65665892 65666179 -23838374 + AluJb SINE Alu 1 298 -14 1219 220 97 37 chr17 65666450 65666832 -23837721 + L1ME3A LINE L1 5628 6032 -138 1771 141 4 11 chr17 65667112 65667382 -23837171 + AluJo SINE Alu 29 296 -16 2943 147 41 45 chr17 65667382 65667427 -23837126 + L1MB3 LINE L1 5567 5611 -572 613 226 0 8 chr17 65667427 65667560 -23836993 + FLAM_A SINE Alu 1 132 -1 2943 147 41 45 chr17 65667560 65668048 -23836505 + L1MB3 LINE L1 5611 6100 -83 2402 71 14 0 chr17 65668048 65668342 -23836211 - AluY SINE Alu -13 298 1 2943 147 41 45 chr17 65668342 65668412 -23836141 + L1MB3 LINE L1 6100 6169 -14 234 254 28 28 chr17 65668705 65668776 -23835777 + MIR SINE MIR 191 261 -1 193 320 98 41 chr17 65668894 65669016 -23835537 + L3 LINE CR1 1049 1177 -400 1228 181 34 48 chr17 65669068 65669361 -23835192 + AluJo SINE Alu 1 289 -13 1446 93 25 80 chr17 65669433 65669670 -23834883 - AluSx SINE Alu -25 287 64 207 0 0 0 chr17 65670085 65670108 -23834445 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 791 182 12 59 chr17 65670114 65670284 -23834269 - AluJo SINE Alu -37 275 114 1993 133 16 7 chr17 65670607 65670915 -23833638 + AluSx SINE Alu 1 311 -1 403 92 0 31 chr17 65671044 65671109 -23833444 - AluSc SINE Alu -9 300 238 1456 190 0 0 chr17 65671210 65671452 -23833101 - AluSx SINE Alu -70 242 1 856 195 13 0 chr17 65671733 65671882 -23832671 - FRAM SINE Alu -15 151 1 1278 126 0 10 chr17 65671893 65672091 -23832462 - AluJb SINE Alu -2 310 115 311 366 18 30 chr17 65672608 65672772 -23831781 + L1MEd LINE L1 455 616 -5503 1099 195 95 91 chr17 65672818 65673032 -23831521 + L1MC5 LINE L1 7404 7616 -345 2249 103 3 0 chr17 65673032 65673323 -23831230 + AluSg SINE Alu 3 294 -16 1099 195 95 91 chr17 65673323 65673451 -23831102 + L1MC5 LINE L1 7616 7742 -219 2215 114 13 0 chr17 65673451 65673759 -23830794 + AluSp SINE Alu 1 312 -1 1099 195 95 91 chr17 65673759 65673922 -23830631 + L1MC5 LINE L1 7742 7912 -49 1656 193 3 16 chr17 65674056 65674361 -23830192 + AluJo SINE Alu 6 306 -6 1553 171 25 21 chr17 65674374 65674660 -23829893 + AluJo SINE Alu 5 291 -21 2306 101 3 0 chr17 65675236 65675534 -23829019 + AluSc SINE Alu 2 300 -9 1944 152 3 3 chr17 65675543 65675839 -23828714 + AluSx SINE Alu 1 296 -16 231 239 32 77 chr17 65675885 65676040 -23828513 + L1ME4a LINE L1 5592 5739 -2069 712 203 0 0 chr17 65676190 65676323 -23828230 - FLAM_C SINE Alu 0 133 1 1505 196 48 14 chr17 65676334 65676625 -23827928 - AluJb SINE Alu -11 301 1 198 0 0 0 chr17 65676628 65676650 -23827903 + (T)n Simple_repeat Simple_repeat 1 22 0 280 286 20 0 chr17 65676664 65676762 -23827791 + L1ME4a LINE L1 5946 6045 -76 2182 90 41 3 chr17 65676778 65677068 -23827485 - AluSq SINE Alu -12 301 1 2208 116 7 0 chr17 65678058 65678359 -23826194 + AluSx SINE Alu 1 303 -9 750 175 0 16 chr17 65678503 65678629 -23825924 - FLAM_C SINE Alu -9 124 1 692 150 75 61 chr17 65678701 65678848 -23825705 - FAM SINE Alu -17 168 20 1898 118 97 3 chr17 65678957 65679287 -23825266 + MER7C DNA MER2_type 4 364 -238 1124 98 81 110 chr17 65679288 65679350 -23825203 - MER30 DNA MER1_type -1 229 167 811 157 0 8 chr17 65679350 65679484 -23825069 - FLAM_C SINE Alu 0 133 1 1124 98 81 110 chr17 65679484 65679657 -23824896 - MER30 DNA MER1_type -63 167 1 1542 136 0 0 chr17 65679657 65679893 -23824660 + MER7C DNA MER2_type 377 612 0 1400 203 21 7 chr17 65680101 65680382 -23824171 - AluJo SINE Alu -22 290 6 1215 168 9 37 chr17 65681058 65681272 -23823281 + AluJo SINE Alu 85 292 -20 817 145 0 0 chr17 65681315 65681432 -23823121 + FLAM_A SINE Alu 1 117 -16 25 31 0 0 chr17 65681432 65681464 -23823089 + AT_rich Low_complexity Low_complexity 1 32 0 253 313 143 7 chr17 65681629 65681776 -23822777 + MIR SINE MIR 75 241 -21 243 0 0 0 chr17 65682379 65682406 -23822147 + (A)n Simple_repeat Simple_repeat 1 27 0 222 62 0 0 chr17 65683708 65683740 -23820813 + (TCC)n Simple_repeat Simple_repeat 1 32 0 207 0 0 0 chr17 65684123 65684146 -23820407 + (GAGTG)n Simple_repeat Simple_repeat 4 26 0 374 172 20 91 chr17 65685072 65685103 -23819450 + MER53 DNA DNA 2 34 -155 2620 30 14 0 chr17 65685103 65685399 -23819154 + AluY SINE Alu 1 300 -11 374 172 20 91 chr17 65685399 65685466 -23819087 + MER53 DNA DNA 34 93 -96 348 218 13 0 chr17 65685400 65685478 -23819075 - MER53 DNA DNA -16 173 95 * 234 125 0 71 chr17 65685586 65685642 -23818911 + MER53 DNA DNA 79 130 -59 1326 145 61 0 chr17 65685642 65685856 -23818697 + AluJo SINE Alu 78 304 -8 358 138 17 0 chr17 65685857 65685915 -23818638 + MER53 DNA DNA 131 189 0 2104 128 36 25 chr17 65686063 65686421 -23818132 - THE1B LTR MaLR 0 364 3 12324 132 139 79 chr17 65686569 65688137 -23816416 + L1M1 LINE L1 845 2317 -5248 1854 184 20 0 chr17 65688137 65688442 -23816111 - AluJb SINE Alu -1 311 1 12324 132 139 79 chr17 65688442 65689400 -23815153 + L1M1 LINE L1 2317 3550 -4015 2305 100 10 0 chr17 65689400 65689699 -23814854 - AluSq SINE Alu -10 303 2 12324 132 139 79 chr17 65689699 65689914 -23814639 + L1M1 LINE L1 3550 3751 -3814 6165 91 8 9 chr17 65689915 65690311 -23814242 + L1MA1 LINE L1 5435 5830 -472 2378 95 0 0 chr17 65690311 65690607 -23813946 + AluSc SINE Alu 1 296 -13 6165 91 8 9 chr17 65690607 65691079 -23813474 + L1MA1 LINE L1 5830 6302 0 981 145 0 20 chr17 65691097 65691249 -23813304 + AluSg/x SINE Alu 137 285 -27 879 238 58 79 chr17 65691606 65691883 -23812670 + MER21B LTR ERV1 182 452 -411 276 103 0 0 chr17 65691883 65691922 -23812631 - LTR24B LTR ERV1 -7 569 531 583 185 118 0 chr17 65691922 65692041 -23812512 - AluJo SINE Alu -178 134 2 949 148 31 6 chr17 65692041 65692203 -23812350 - LTR24B LTR ERV1 -33 543 378 757 218 7 0 chr17 65692206 65692348 -23812205 - FRAM SINE Alu -34 142 1 2477 99 47 6 chr17 65692348 65692712 -23811841 - LTR24B LTR ERV1 -197 379 1 1973 142 23 54 chr17 65692712 65692735 -23811818 + MER21B LTR ERV1 449 471 -392 2237 106 0 20 chr17 65692735 65693037 -23811516 + AluSq SINE Alu 1 296 -17 1973 142 23 54 chr17 65693037 65693365 -23811188 + MER21B LTR ERV1 471 789 -74 1525 204 50 3 chr17 65693429 65693587 -23810966 + MLT1G LTR MaLR 253 402 -188 2699 177 46 4 chr17 65693587 65694062 -23810491 - LTR42 LTR ERVL 0 495 1 1525 204 50 3 chr17 65694062 65694226 -23810327 + MLT1G LTR MaLR 402 590 0 2170 142 0 0 chr17 65694335 65694637 -23809916 + AluSx SINE Alu 1 302 -10 2362 71 0 10 chr17 65694716 65695010 -23809543 + AluY SINE Alu 1 291 -20 1484 206 34 3 chr17 65695297 65695589 -23808964 - AluJb SINE Alu -11 301 1 1573 164 28 24 chr17 65695813 65696100 -23808453 + AluJb SINE Alu 2 289 -23 2319 88 3 10 chr17 65696110 65696405 -23808148 + AluSg SINE Alu 2 294 -16 1542 185 20 10 chr17 65696415 65696712 -23807841 + AluJb SINE Alu 2 301 -11 2127 123 10 0 chr17 65696714 65697014 -23807539 + AluSx SINE Alu 1 303 -9 272 104 4 0 chr17 65697096 65697142 -23807411 + AluJb SINE Alu 178 214 -88 1804 173 7 13 chr17 65697623 65697929 -23806624 + AluSx SINE Alu 1 304 -8 1428 183 0 4 chr17 65698020 65698261 -23806292 + AluJo SINE Alu 73 312 0 504 207 0 41 chr17 65698536 65698657 -23805896 + FLAM_A SINE Alu 22 137 -5 329 159 72 16 chr17 65698657 65698914 -23805639 + (TA)n Simple_repeat Simple_repeat 1 271 0 2300 139 39 46 chr17 65699017 65699065 -23805488 + MSTC LTR MaLR 1 48 -380 1717 199 13 3 chr17 65699065 65699366 -23805187 + AluJo SINE Alu 1 304 -8 2300 139 39 46 chr17 65699366 65699748 -23804805 + MSTC LTR MaLR 48 428 0 1278 188 30 56 chr17 65699848 65700189 -23804364 + Tigger7 DNA MER2_type 1 2490 -1 2235 116 3 0 chr17 65700226 65700527 -23804026 - AluSx SINE Alu -10 302 1 859 181 0 0 chr17 65700764 65700897 -23803656 + FAM SINE Alu 1 133 -52 3704 146 19 8 chr17 65701007 65701637 -23802916 - L1MB4 LINE L1 -83 6097 5461 2049 128 37 0 chr17 65701637 65701933 -23802620 + AluSx SINE Alu 1 307 -5 2184 110 0 10 chr17 65701944 65702243 -23802310 + AluSx SINE Alu 15 310 -2 35 0 0 0 chr17 65702243 65702278 -23802275 + AT_rich Low_complexity Low_complexity 1 35 0 745 191 6 49 chr17 65702320 65702482 -23802071 + FRAM SINE Alu 1 155 -11 1285 168 0 59 chr17 65702500 65702738 -23801815 + AluJb SINE Alu 59 282 -30 23 33 0 0 chr17 65702738 65702768 -23801785 + AT_rich Low_complexity Low_complexity 1 30 0 1074 147 0 6 chr17 65702988 65703151 -23801402 - AluJb SINE Alu -17 295 134 295 324 68 51 chr17 65704061 65704237 -23800316 - MLT1K LTR MaLR -399 189 11 2160 113 23 3 chr17 65704343 65704643 -23799910 - AluSp SINE Alu -7 306 1 851 81 137 87 chr17 65704647 65704808 -23799745 - FRAM SINE Alu -9 167 1 1068 193 21 41 chr17 65704826 65705069 -23799484 - L1ME2 LINE L1 -10 6154 5917 303 244 50 8 chr17 65705081 65705200 -23799353 - L1MEc LINE L1 -4256 2140 2017 2117 126 10 0 chr17 65705473 65705767 -23798786 - AluSx SINE Alu -15 297 1 863 162 0 0 chr17 65705804 65705946 -23798607 - AluSg/x SINE Alu 0 312 171 1665 115 51 0 chr17 65705946 65706181 -23798372 - AluSx SINE Alu -57 255 9 328 264 90 19 chr17 65706433 65706588 -23797965 + L1ME3A LINE L1 4385 4550 -1596 364 158 0 49 chr17 65706870 65706952 -23797601 - AluJ/FRAM SINE Alu -4 298 221 1639 154 0 21 chr17 65706953 65707232 -23797321 + AluSx SINE Alu 1 273 -39 1128 242 164 10 chr17 65707271 65707753 -23796800 + L1ME3A LINE L1 5333 5907 -263 1105 197 136 11 chr17 65707753 65708032 -23796521 - MER119 DNA MER1_type 0 583 270 727 157 9 0 chr17 65708144 65708259 -23796294 + FLAM_C SINE Alu 3 118 -25 41 17 0 17 chr17 65708259 65708279 -23796274 + AT_rich Low_complexity Low_complexity 1 20 -38 2158 131 0 0 chr17 65708279 65708570 -23795983 + AluSx SINE Alu 1 291 -21 41 17 0 17 chr17 65708570 65708608 -23795945 + AT_rich Low_complexity Low_complexity 20 58 0 1890 156 0 11 chr17 65708625 65708907 -23795646 + AluJo SINE Alu 13 291 -21 2350 93 7 3 chr17 65708928 65709228 -23795325 + AluSq SINE Alu 1 301 -12 408 214 39 10 chr17 65709287 65709390 -23795163 - MLT1L LTR MaLR 0 615 510 587 152 179 0 chr17 65709552 65709664 -23794889 + FLAM_A SINE Alu 1 132 -1 338 183 166 3 chr17 65709853 65709963 -23794590 - L1ME2 LINE L1 -394 5776 5649 773 283 91 96 chr17 65710427 65710978 -23793575 - MLT1K LTR MaLR 0 588 41 3316 142 32 2 chr17 65710980 65711514 -23793039 + L1PA16 LINE L1 5617 6166 0 664 244 53 57 chr17 65711828 65712131 -23792422 + AluJo SINE Alu 1 302 0 1830 121 8 0 chr17 65712330 65712587 -23791966 - AluSg SINE Alu -12 298 40 2230 125 3 0 chr17 65713334 65713639 -23790914 - AluSx SINE Alu -6 306 1 661 203 0 43 chr17 65713972 65714110 -23790443 - FLAM_C SINE Alu 0 133 2 2336 103 0 0 chr17 65714233 65714543 -23790010 + AluSg SINE Alu 1 310 0 566 193 129 57 chr17 65714594 65714858 -23789695 - L1M4 LINE L1 -1445 4701 4419 694 294 93 50 chr17 65714881 65715342 -23789211 - L2 LINE L2 -50 3263 2758 1767 157 17 14 chr17 65715342 65715635 -23788918 - AluSx SINE Alu -18 294 1 694 294 93 50 chr17 65715635 65715811 -23788742 - L2 LINE L2 -555 2758 2591 1071 146 0 6 chr17 65715811 65715975 -23788578 + AluSg/x SINE Alu 135 297 -13 888 163 46 0 chr17 65716026 65716179 -23788374 + FAM SINE Alu 2 161 -14 550 316 123 35 chr17 65716201 65716865 -23787688 - L2 LINE L2 -2523 791 69 238 260 71 47 chr17 65716933 65717060 -23787493 - L1M4 LINE L1 -2393 3753 3624 24 67 0 0 chr17 65717196 65717241 -23787312 + AT_rich Low_complexity Low_complexity 1 45 0 205 241 0 17 chr17 65718643 65718701 -23785852 + (CCG)n Simple_repeat Simple_repeat 2 58 0 608 113 0 176 chr17 65720541 65720700 -23783853 - FLAM_C SINE Alu -2 131 1 180 0 0 0 chr17 65720895 65720915 -23783638 + (A)n Simple_repeat Simple_repeat 1 20 0 4152 178 87 33 chr17 65721327 65721602 -23782951 - Charlie1a DNA MER1_type -1311 1450 1191 2165 98 28 3 chr17 65721602 65721888 -23782665 + AluSx SINE Alu 1 293 -19 4152 178 87 33 chr17 65721888 65722674 -23781879 - Charlie1a DNA MER1_type -1570 1191 332 903 207 17 0 chr17 65722674 65722853 -23781700 + AluJb SINE Alu 86 267 -45 1473 209 16 37 chr17 65722855 65722919 -23781634 - Charlie1a DNA MER1_type -2419 342 278 1926 133 47 17 chr17 65722919 65723220 -23781333 - AluSx SINE Alu -2 310 1 1473 209 16 37 chr17 65723220 65723476 -23781077 - Charlie1a DNA MER1_type -2483 278 29 3392 167 51 32 chr17 65723696 65723733 -23780820 - L1MB4 LINE L1 -6 6174 6139 2185 106 3 10 chr17 65723733 65724035 -23780518 + AluSx SINE Alu 1 300 -12 3392 167 51 32 chr17 65724035 65724680 -23779873 - L1MB4 LINE L1 -41 6139 5479 1383 166 3 105 chr17 65724911 65725243 -23779310 - AluJo SINE Alu -14 298 1 2145 80 3 63 chr17 65725383 65725712 -23778841 - AluSp SINE Alu 0 312 2 1016 125 132 0 chr17 65726492 65726644 -23777909 + AluY SINE Alu 1 172 -139 413 102 0 17 chr17 65726644 65726703 -23777850 + AluSc SINE Alu 222 279 -30 1412 159 14 0 chr17 65726804 65727012 -23777541 - AluJb SINE Alu -101 211 1 1032 110 110 101 chr17 65727013 65727184 -23777369 + MLT1F1 LTR MaLR 339 515 -52 1970 162 0 0 chr17 65727184 65727491 -23777062 - AluSx SINE Alu 0 307 1 1032 110 110 101 chr17 65727491 65727545 -23777008 + MLT1F1 LTR MaLR 515 567 0 1856 173 0 0 chr17 65727794 65728089 -23776464 + AluJb SINE Alu 1 295 -17 586 198 0 9 chr17 65728418 65728524 -23776029 - FRAM SINE Alu -75 101 1 446 287 104 6 chr17 65728524 65728688 -23775865 + Charlie8 DNA MER1_type 86 265 -2152 2187 135 0 0 chr17 65728970 65729317 -23775236 - AluJb SINE Alu 0 347 1 2315 106 0 3 chr17 65729598 65729909 -23774644 - AluSg SINE Alu 0 310 1 2405 89 3 0 chr17 65729911 65730215 -23774338 - AluSc SINE Alu -4 305 1 364 212 0 12 chr17 65730827 65730912 -23773641 + L2 LINE L2 2451 2534 -780 718 112 19 9 chr17 65730918 65731025 -23773528 + AluJb SINE Alu 4 111 -201 1123 184 163 16 chr17 65731033 65731433 -23773120 - LTR18B LTR ERVL -63 551 1 546 144 0 0 chr17 65731433 65731523 -23773030 + FLAM_C SINE Alu 53 142 -1 671 245 68 12 chr17 65731541 65731790 -23772763 + HAL1 LINE L1 1686 1948 -559 3536 114 79 22 chr17 65731797 65732378 -23772175 - LTR18B LTR ERVL 0 614 1 1891 174 10 0 chr17 65732581 65732880 -23771673 - HERVL18 LTR ERVL -2556 3491 3190 1062 84 7 0 chr17 65732880 65733022 -23771531 + AluSg/x SINE Alu 168 310 0 375 105 38 4 chr17 65733033 65733144 -23771409 - HERVL18 LTR ERVL -3768 2279 2119 * 1128 186 20 7 chr17 65733143 65733498 -23771055 - HERVL18 LTR ERVL -4237 1810 1388 895 222 12 0 chr17 65733526 65733697 -23770856 - HERVL18 LTR ERVL -5381 666 494 * 1614 185 3 11 chr17 65733682 65733969 -23770584 - HERVL18 LTR ERVL -5744 303 19 3430 125 78 14 chr17 65733990 65734567 -23769986 - LTR18B LTR ERVL 0 614 1 436 228 103 0 chr17 65734574 65734719 -23769834 + HAL1 LINE L1 1943 2102 -405 2140 104 13 30 chr17 65734746 65735045 -23769508 + AluSq SINE Alu 1 294 -19 279 180 0 16 chr17 65735059 65735120 -23769433 + THE1B LTR MaLR 195 254 -110 31 0 0 0 chr17 65735614 65735645 -23768908 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 65735714 65735735 -23768818 + AT_rich Low_complexity Low_complexity 1 21 0 1286 108 84 117 chr17 65736387 65736720 -23767833 - MER33 DNA MER1_type -2 322 1 1072 154 0 6 chr17 65736728 65736903 -23767650 + MER5A DNA MER1_type 1 174 -15 607 184 0 0 chr17 65737082 65737180 -23767373 - LTR32 LTR ERVL 0 471 374 1002 142 0 0 chr17 65737187 65737328 -23767225 - AluJb SINE Alu -16 296 156 23 0 0 0 chr17 65737340 65737363 -23767190 + AT_rich Low_complexity Low_complexity 1 23 0 1824 126 14 35 chr17 65737392 65737487 -23767066 - LTR32 LTR ERVL -80 391 296 2354 101 0 3 chr17 65737487 65737785 -23766768 + AluSx SINE Alu 1 297 -15 1824 126 14 35 chr17 65737785 65737975 -23766578 - LTR32 LTR ERVL -175 296 112 2094 125 7 0 chr17 65738331 65738618 -23765935 - AluSx SINE Alu -23 289 1 521 154 16 106 chr17 65738974 65739013 -23765540 - LTR32 LTR ERVL -345 126 85 1724 111 118 26 chr17 65739013 65739146 -23765407 - AluSx SINE Alu -16 296 177 245 27 54 0 chr17 65739146 65739183 -23765370 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2237 97 0 0 chr17 65739183 65739462 -23765091 - AluSc SINE Alu -30 279 1 1724 111 118 26 chr17 65739462 65739598 -23764955 - AluSx SINE Alu -134 178 1 521 154 16 106 chr17 65739598 65739681 -23764872 - LTR32 LTR ERVL -386 85 15 2606 188 34 38 chr17 65739682 65740215 -23764338 + MLT1F LTR MaLR 10 540 -2 1971 151 0 0 chr17 65740422 65740706 -23763847 + AluSx SINE Alu 1 284 -28 872 144 0 8 chr17 65740882 65741014 -23763539 - FLAM_A SINE Alu -1 132 2 402 221 136 7 chr17 65741040 65741194 -23763359 - L1ME LINE L1 -326 5795 5622 421 121 0 0 chr17 65741197 65741255 -23763298 + AluS SINE Alu 2 59 -259 1568 187 11 14 chr17 65741648 65741926 -23762627 + AluJo SINE Alu 1 277 -35 462 256 99 6 chr17 65742247 65742419 -23762134 + LTR16C LTR ERVL 298 485 -6 2135 132 10 0 chr17 65742500 65742796 -23761757 + AluSx SINE Alu 1 299 -13 610 313 41 38 chr17 65742843 65743134 -23761419 + L2 LINE L2 2839 3130 -183 1773 161 3 20 chr17 65743244 65743536 -23761017 + AluJo SINE Alu 1 287 -25 2727 103 99 14 chr17 65743963 65744465 -23760088 + LTR35 LTR ERV1 1 618 0 677 175 0 0 chr17 65744465 65744579 -23759974 + L1MD3 LINE L1 7714 7827 -168 2334 106 0 3 chr17 65744698 65745009 -23759544 + AluSq SINE Alu 3 312 -1 1123 201 75 53 chr17 65745227 65745545 -23759008 + MLT1D LTR MaLR 1 325 -180 2555 221 134 118 chr17 65745545 65745834 -23758719 - L1M4 LINE L1 -4842 1700 1417 1592 150 73 4 chr17 65745834 65746094 -23758459 - AluJo SINE Alu -29 283 6 2555 221 134 118 chr17 65746094 65746110 -23758443 - L1M4 LINE L1 -5125 1417 1403 1885 172 0 0 chr17 65746110 65746401 -23758152 - AluJo SINE Alu -21 291 1 2555 221 134 118 chr17 65746401 65746567 -23757986 - L1M4 LINE L1 -5139 1403 1241 2466 89 3 0 chr17 65746567 65746871 -23757682 - AluSp SINE Alu -8 305 1 2555 221 134 118 chr17 65746871 65746983 -23757570 - L1M4 LINE L1 -5301 1241 1132 2653 61 0 0 chr17 65746983 65747294 -23757259 - AluSq SINE Alu 0 313 3 2555 221 134 118 chr17 65747294 65748342 -23756211 - L1M4 LINE L1 -5410 1132 40 2316 105 0 10 chr17 65748397 65748710 -23755843 - AluSx SINE Alu -2 310 1 2612 58 0 6 chr17 65748728 65749040 -23755513 - AluY SINE Alu -1 310 1 2173 56 102 7 chr17 65749051 65749335 -23755218 - AluY SINE Alu 0 311 1 183 80 0 0 chr17 65749644 65749669 -23754884 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 291 196 0 0 chr17 65749753 65749809 -23754744 - FLAM SINE Alu -2 131 76 180 0 0 0 chr17 65749842 65749862 -23754691 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1863 118 0 4 chr17 65749876 65750130 -23754423 - AluSq SINE Alu -47 266 14 1968 150 0 0 chr17 65750514 65750800 -23753753 + AluSx SINE Alu 1 286 -26 1601 195 44 0 chr17 65750856 65751154 -23753399 + AluJb SINE Alu 1 311 -1 2078 108 4 4 chr17 65751723 65752002 -23752551 + AluSc SINE Alu 1 279 -30 810 278 64 0 chr17 65752067 65752301 -23752252 + MIR SINE MIR 13 261 -1 2292 106 0 0 chr17 65752376 65752669 -23751884 - AluSx SINE Alu -19 293 1 386 252 122 0 chr17 65752757 65752904 -23751649 - MIR SINE MIR -50 212 48 2309 110 0 7 chr17 65752907 65753217 -23751336 - AluSq SINE Alu -3 310 3 452 223 66 8 chr17 65753324 65753445 -23751108 + FLAM_A SINE Alu 5 132 -1 1075 210 62 58 chr17 65753597 65753873 -23750680 + AluJo SINE Alu 1 277 -35 203 257 88 53 chr17 65753981 65754094 -23750459 + L2 LINE L2 1356 1472 -1842 733 182 21 0 chr17 65754187 65754330 -23750223 + MER5A DNA MER1_type 44 189 0 432 306 58 17 chr17 65754347 65754520 -23750033 + MER5A DNA MER1_type 10 189 0 2292 98 0 13 chr17 65754609 65754916 -23749637 - AluSq SINE Alu -10 303 1 2000 144 0 3 chr17 65754976 65755274 -23749279 + AluJb SINE Alu 5 301 -11 553 333 71 18 chr17 65755283 65755664 -23748889 + L2 LINE L2 1698 2098 -1216 849 150 18 66 chr17 65755787 65755954 -23748599 - MER20 DNA MER1_type -54 165 7 2213 134 0 0 chr17 65756037 65756343 -23748210 - AluSx SINE Alu -6 306 1 316 253 13 0 chr17 65757059 65757138 -23747415 + L2 LINE L2 3221 3300 -13 1268 185 161 8 chr17 65757376 65757636 -23746917 - AluSg SINE Alu 0 300 1 2300 95 3 3 chr17 65757649 65757997 -23746556 - AluSp SINE Alu 0 313 1 1443 136 74 21 chr17 65758519 65758790 -23745763 - AluJo SINE Alu 0 313 30 2424 91 7 0 chr17 65759187 65759496 -23745057 + AluY SINE Alu 1 311 0 2164 99 0 3 chr17 65760740 65761024 -23743529 - AluSq SINE Alu 0 313 31 1399 130 7 104 chr17 65761124 65761190 -23743363 + AluJb SINE Alu 67 138 -174 2073 102 33 13 chr17 65761190 65761494 -23743059 + AluSg SINE Alu 1 310 0 1399 130 7 104 chr17 65761494 65761697 -23742856 + AluJb SINE Alu 138 310 -2 2094 97 0 94 chr17 65761705 65762044 -23742509 + AluSg SINE Alu 1 307 -3 1645 153 15 22 chr17 65762070 65762338 -23742215 + AluJo SINE Alu 1 266 -46 2238 76 24 0 chr17 65762395 65762683 -23741870 - AluY SINE Alu -16 295 1 2163 124 40 143 chr17 65762892 65763500 -23741053 - LTR12 LTR ERV1 -219 2219 53 252 231 0 0 chr17 65763500 65763552 -23741001 - LTR30 LTR ERV1 -670 52 1 493 208 9 9 chr17 65763561 65763667 -23740886 - MER87 LTR ERV1 0 541 436 2235 97 7 17 chr17 65763790 65763953 -23740600 - AluSx SINE Alu -15 297 137 2289 107 0 7 chr17 65763953 65764263 -23740290 - AluSc SINE Alu -1 308 1 2235 97 7 17 chr17 65764263 65764399 -23740154 - AluSx SINE Alu -175 137 1 288 226 236 0 chr17 65764466 65764572 -23739981 - L1ME4a LINE L1 0 6121 5991 21 36 0 0 chr17 65764669 65764697 -23739856 + GC_rich Low_complexity Low_complexity 1 28 0 2804 86 38 90 chr17 65764748 65765250 -23739303 + SVA Other Other 393 868 -518 1622 137 90 47 chr17 65765413 65765734 -23738819 - Tigger2 DNA MER2_type -2154 564 230 2068 125 0 44 chr17 65765780 65766100 -23738453 - AluSx SINE Alu -6 306 1 1432 112 37 29 chr17 65766100 65766341 -23738212 - Tigger2 DNA MER2_type -2474 244 2 2188 128 7 0 chr17 65766512 65766816 -23737737 - AluSx SINE Alu -6 306 1 511 339 82 24 chr17 65766820 65767272 -23737281 + L2 LINE L2 1758 2235 -1079 2473 74 0 0 chr17 65768673 65768972 -23735581 + AluSx SINE Alu 1 299 -13 339 286 79 32 chr17 65769035 65769161 -23735392 + MER94 DNA DNA 1 132 -2 1264 162 75 55 chr17 65769161 65769414 -23735139 - AluJo SINE Alu -46 266 9 4251 116 18 10 chr17 65769618 65770246 -23734307 + MER41B LTR ERV1 1 633 -2 1647 181 0 0 chr17 65770246 65770511 -23734042 + AluJo SINE Alu 10 274 -38 9785 127 17 29 chr17 65770611 65771223 -23733330 + Tigger2 DNA MER2_type 910 1528 -1190 2292 96 10 0 chr17 65771223 65771516 -23733037 + AluSx SINE Alu 1 296 -16 9785 127 17 29 chr17 65771516 65771901 -23732652 + Tigger2 DNA MER2_type 1528 1916 -802 2237 105 20 0 chr17 65771901 65772205 -23732348 + AluSx SINE Alu 1 310 -2 9785 127 17 29 chr17 65772205 65772732 -23731821 + Tigger2 DNA MER2_type 1916 2418 -300 2308 95 0 3 chr17 65772732 65773027 -23731526 - AluSq SINE Alu -18 295 2 9785 127 17 29 chr17 65773027 65773070 -23731483 + Tigger2 DNA MER2_type 2418 2460 -258 651 146 58 0 chr17 65773185 65773288 -23731265 + FRAM SINE Alu 54 162 -14 379 217 83 42 chr17 65773360 65773480 -23731073 - L1MB3 LINE L1 -2 6181 6057 1707 123 11 11 chr17 65773498 65773775 -23730778 - L1PA16 LINE L1 -2 6164 5888 3948 137 49 5 chr17 65773838 65774687 -23729866 - L1PA16 LINE L1 -282 5884 4994 262 275 33 22 chr17 65774837 65774928 -23729625 - LTR41 LTR ERVL -559 214 123 393 262 24 0 chr17 65775173 65775299 -23729254 + L1MC4 LINE L1 6949 7077 -965 189 0 0 0 chr17 65775319 65775340 -23729213 + (T)n Simple_repeat Simple_repeat 1 21 0 333 120 0 0 chr17 65775340 65775390 -23729163 - MER57B LTR ERV1 -25 409 360 1065 266 47 76 chr17 65775533 65775970 -23728583 + L1MC4 LINE L1 7114 7533 -509 2172 106 26 0 chr17 65775970 65776273 -23728280 - AluSx SINE Alu 0 312 2 1065 266 47 76 chr17 65776273 65776385 -23728168 + L1MC4 LINE L1 7533 7647 -395 806 117 0 42 chr17 65776401 65776521 -23728032 - FLAM_C SINE Alu -18 125 11 362 265 174 32 chr17 65776536 65776755 -23727798 + L1MC4 LINE L1 7651 7900 -142 * 790 279 63 9 chr17 65776750 65777065 -23727488 + L1M4 LINE L1 4187 4518 -1628 2416 91 0 0 chr17 65777167 65777464 -23727089 + AluSq SINE Alu 1 297 -16 435 211 0 0 chr17 65777546 65777641 -23726912 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 1275 104 0 153 chr17 65777744 65777941 -23726612 - AluSg/x SINE Alu -16 296 143 2321 73 3 3 chr17 65777941 65778230 -23726323 - AluSp SINE Alu -24 289 1 1275 104 0 153 chr17 65778230 65778281 -23726272 - AluSg/x SINE Alu -169 143 86 296 333 147 0 chr17 65778379 65778577 -23725976 - L2 LINE L2 -223 3049 2823 2215 123 3 0 chr17 65778720 65779022 -23725531 - AluSx SINE Alu -9 303 1 652 206 56 0 chr17 65779143 65779269 -23725284 - FLAM_A SINE Alu 0 133 1 332 26 0 0 chr17 65779706 65779744 -23724809 + (T)n Simple_repeat Simple_repeat 1 38 0 827 253 4 12 chr17 65779770 65780015 -23724538 + AluJb SINE Alu 21 263 -49 2322 82 7 0 chr17 65780369 65780660 -23723893 + AluY SINE Alu 1 293 -18 489 276 57 44 chr17 65780864 65781062 -23723491 - MIR SINE MIR -25 237 34 2397 55 62 3 chr17 65781062 65781352 -23723201 - AluSp SINE Alu -6 307 1 489 276 57 44 chr17 65781352 65781381 -23723172 - MIR SINE MIR -228 34 7 180 298 0 18 chr17 65781512 65781569 -23722984 + L2 LINE L2 3014 3069 -203 2014 126 0 14 chr17 65782647 65782969 -23721584 - AluJb SINE Alu 0 312 19 1579 102 0 10 chr17 65783082 65783288 -23721265 - AluSq SINE Alu -109 204 1 800 172 7 28 chr17 65783553 65783698 -23720855 - FLAM_C SINE Alu 0 143 2 2471 68 7 16 chr17 65783856 65784164 -23720389 - AluY SINE Alu -6 305 1 2308 98 20 0 chr17 65784458 65784625 -23719928 - AluSx SINE Alu -9 303 126 188 35 35 0 chr17 65784625 65784654 -23719899 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2308 98 20 0 chr17 65784654 65784783 -23719770 - AluSx SINE Alu -186 126 1 195 129 0 0 chr17 65784820 65784851 -23719702 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 186 43 0 0 chr17 65784849 65784872 -23719681 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 * 1838 158 0 11 chr17 65784872 65785157 -23719396 - AluJb SINE Alu -30 282 1 2071 152 20 0 chr17 65785447 65785749 -23718804 - 7SLRNA srpRNA srpRNA -12 308 1 302 295 53 0 chr17 65785838 65785933 -23718620 + MLT1K LTR MaLR 141 240 -348 1759 183 7 0 chr17 65786166 65786455 -23718098 + AluJo SINE Alu 3 293 -19 1789 124 115 35 chr17 65786466 65786650 -23717903 + L1MB3 LINE L1 5566 5734 -449 2211 96 24 3 chr17 65786650 65786942 -23717611 + AluSc SINE Alu 1 298 -11 1789 124 115 35 chr17 65786942 65787096 -23717457 + L1MB3 LINE L1 5734 5931 -252 1865 164 3 3 chr17 65787377 65787670 -23716883 - AluJo SINE Alu -19 293 1 3316 142 32 2 chr17 65787984 65788518 -23716035 - L1PA16 LINE L1 0 6166 5617 773 283 91 96 chr17 65788520 65789071 -23715482 + MLT1K LTR MaLR 41 588 0 338 183 166 3 chr17 65789535 65789645 -23714908 + L1ME LINE L1 5649 5776 -394 587 152 179 0 chr17 65789834 65789946 -23714607 - FLAM_A SINE Alu -1 132 1 408 214 39 10 chr17 65790108 65790211 -23714342 + MLT1L LTR MaLR 510 615 0 2342 94 7 3 chr17 65790270 65790569 -23713984 - AluSq SINE Alu -13 300 1 1890 156 0 11 chr17 65790590 65790872 -23713681 - AluJo SINE Alu -21 291 13 41 17 0 17 chr17 65790889 65790927 -23713626 + AT_rich Low_complexity Low_complexity 1 39 -19 2158 131 0 0 chr17 65790927 65791218 -23713335 - AluSx SINE Alu -21 291 1 41 17 0 17 chr17 65791218 65791238 -23713315 + AT_rich Low_complexity Low_complexity 39 58 0 400 138 0 0 chr17 65791238 65791296 -23713257 - FLAM SINE Alu -25 118 61 1440 168 17 4 chr17 65791527 65791759 -23712794 + AluJo SINE Alu 12 246 -66 347 281 115 22 chr17 65792540 65792679 -23711874 - HsTC2 DNA Tc2 -351 1547 1220 1608 284 83 12 chr17 65792686 65793489 -23711064 - L1M4 LINE L1 -1420 4726 3867 539 125 2 108 chr17 65793999 65794042 -23710511 - L1MB7 LINE L1 0 6183 6137 2435 61 14 0 chr17 65794042 65794335 -23710218 - AluY SINE Alu -14 297 1 539 125 2 108 chr17 65794335 65794414 -23710139 - L1MB7 LINE L1 -46 6137 6069 1992 117 20 17 chr17 65794414 65794714 -23709839 - AluSx SINE Alu -11 301 1 539 125 2 108 chr17 65794714 65794732 -23709821 - L1MB7 LINE L1 -114 6069 6051 697 128 0 60 chr17 65794737 65794854 -23709699 - FLAM_A SINE Alu -9 133 24 2219 106 3 3 chr17 65795064 65795356 -23709197 + AluSq SINE Alu 3 294 -19 22 35 0 0 chr17 65795448 65795477 -23709076 + AT_rich Low_complexity Low_complexity 1 29 0 2287 90 3 0 chr17 65795924 65796237 -23708316 + AluSx SINE Alu 1 312 0 207 313 10 20 chr17 65796363 65796462 -23708091 - L2 LINE L2 -939 2375 2278 1036 144 19 6 chr17 65796469 65796629 -23707924 + FAM SINE Alu 10 171 -14 401 202 90 0 chr17 65796959 65797048 -23707505 + MER104 DNA Tc2 6 102 -78 2332 100 0 0 chr17 65797050 65797351 -23707202 - AluSc SINE Alu -8 301 1 6723 147 43 54 chr17 65797783 65799927 -23704626 - L1MA4 LINE L1 -278 6022 3895 975 96 0 0 chr17 65799931 65800056 -23704497 - AluSg/x SINE Alu -17 293 169 1797 120 0 0 chr17 65800156 65800390 -23704163 - AluSp SINE Alu -79 234 1 1703 201 48 48 chr17 65800390 65800802 -23703751 - MER87 LTR ERV1 -129 412 1 2126 135 0 6 chr17 65800871 65801183 -23703370 - AluSx SINE Alu -2 310 1 1648 127 41 63 chr17 65801193 65801221 -23703332 - AluSx SINE Alu -4 308 281 453 115 0 0 chr17 65801221 65801308 -23703245 + (TATG)n Simple_repeat Simple_repeat 2 88 0 1648 127 41 63 chr17 65801308 65801594 -23702959 - AluSx SINE Alu -31 281 1 2070 113 0 3 chr17 65803529 65803813 -23700740 + AluSx SINE Alu 5 287 -25 185 65 32 0 chr17 65803995 65804026 -23700527 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 403 224 89 70 chr17 65804349 65804440 -23700113 - MER112 DNA MER1_type -2 258 170 2430 79 13 0 chr17 65804440 65804744 -23699809 + AluY SINE Alu 1 308 -3 403 224 89 70 chr17 65804744 65804866 -23699687 - MER112 DNA MER1_type -90 170 41 1387 97 19 10 chr17 65804866 65805072 -23699481 - L1PA13 LINE L1 -13 6150 5943 1402 111 9 53 chr17 65805223 65805449 -23699104 - AluSg/x SINE Alu -17 293 78 1837 154 0 7 chr17 65805810 65806090 -23698463 - AluSx SINE Alu -15 297 20 1026 113 0 13 chr17 65806770 65806921 -23697632 - L1MB3 LINE L1 -233 5950 5802 1886 171 0 0 chr17 65806921 65807219 -23697334 + AluJb SINE Alu 1 298 -14 1748 135 4 0 chr17 65807272 65807517 -23697036 + AluSx SINE Alu 1 246 -66 1999 127 7 3 chr17 65807633 65807917 -23696636 - AluSg SINE Alu -25 285 1 750 195 0 0 chr17 65807930 65808048 -23696505 - FLAM_C SINE Alu -15 118 1 2277 100 7 0 chr17 65808487 65808777 -23695776 - AluSx SINE Alu -19 293 2 362 270 44 0 chr17 65808777 65808898 -23695655 - L1MB3 LINE L1 -449 5672 5543 813 173 0 0 chr17 65809079 65809206 -23695347 - FLAM_C SINE Alu -16 127 1 2498 77 0 0 chr17 65809521 65809820 -23694733 - AluY SINE Alu -12 299 1 1801 181 3 0 chr17 65809892 65810191 -23694362 - AluJo SINE Alu -12 300 1 1859 154 0 53 chr17 65810861 65810970 -23693583 + AluJb SINE Alu 1 114 -198 2367 98 0 10 chr17 65810970 65811277 -23693276 + AluSx SINE Alu 1 304 -8 1859 154 0 53 chr17 65811277 65811485 -23693068 + AluJb SINE Alu 114 301 -11 186 289 0 0 chr17 65811598 65811643 -23692910 - MIR SINE MIR -170 92 48 753 132 0 16 chr17 65811757 65811878 -23692675 + AluSg/x SINE Alu 192 310 0 2175 108 10 7 chr17 65811885 65812182 -23692371 + AluSx SINE Alu 1 298 -14 1502 181 19 58 chr17 65812492 65812817 -23691736 - AluJo SINE Alu 0 312 1 1050 163 17 6 chr17 65812955 65813127 -23691426 + FAM SINE Alu 1 174 -1 355 247 114 70 chr17 65813316 65813543 -23691010 - L1ME3A LINE L1 0 6170 5934 642 161 36 18 chr17 65813713 65813825 -23690728 - FLAM_A SINE Alu -19 123 10 888 263 70 23 chr17 65813835 65814339 -23690214 - L1ME3A LINE L1 -475 5687 5154 4321 165 31 16 chr17 65814349 65815160 -23689393 - L1MA9 LINE L1 -51 6261 5439 1261 181 32 16 chr17 65815162 65815411 -23689142 - AluJo SINE Alu -11 301 49 1902 147 32 83 chr17 65815411 65815526 -23689027 - L1MA9 LINE L1 -743 5403 5284 2045 118 0 0 chr17 65815526 65815856 -23688697 - AluSg SINE Alu 0 330 1 1902 147 32 83 chr17 65815856 65816054 -23688499 - L1MA9 LINE L1 -862 5284 5077 1681 143 63 21 chr17 65816054 65816367 -23688186 - AluSg SINE Alu 0 310 1 1902 147 32 83 chr17 65816367 65816470 -23688083 - L1MA9 LINE L1 -1069 5077 5046 2329 122 0 0 chr17 65816470 65816782 -23687771 - AluSx SINE Alu 0 312 1 1902 147 32 83 chr17 65816782 65816937 -23687616 - L1MA9 LINE L1 -1100 5046 4885 957 137 41 7 chr17 65816941 65817114 -23687439 - AluSc SINE Alu 0 310 133 2242 75 11 0 chr17 65817114 65817393 -23687160 - AluYb8 SINE Alu 0 318 37 944 185 19 0 chr17 65817538 65817700 -23686853 + FAM SINE Alu 1 165 -10 854 118 0 37 chr17 65817714 65817849 -23686704 + FLAM_C SINE Alu 4 133 0 22 0 0 0 chr17 65818015 65818037 -23686516 + AT_rich Low_complexity Low_complexity 1 22 0 1763 166 0 42 chr17 65818100 65818413 -23686140 - AluJb SINE Alu -12 300 1 6687 103 199 96 chr17 65818550 65820086 -23684467 - pTR5 LTR ERV1 0 2438 744 313 273 0 0 chr17 65820086 65820152 -23684401 - MIR SINE MIR -184 78 13 912 251 68 41 chr17 65820472 65820810 -23683743 + HERVL LTR ERVL 2180 2526 -3128 420 243 50 39 chr17 65820883 65821064 -23683489 - L1MC4 LINE L1 -110 7932 7750 1088 115 36 12 chr17 65821070 65821235 -23683318 + Tigger3(Golem) DNA MER2_type 2870 3038 0 237 302 21 10 chr17 65821235 65821331 -23683222 + L1ME1 LINE L1 5919 6015 -151 670 181 56 0 chr17 65821332 65821476 -23683077 + L1MA10 LINE L1 6176 6327 -7 414 281 100 0 chr17 65821648 65821808 -23682745 + L1ME3A LINE L1 5106 5281 -865 1886 151 37 10 chr17 65821809 65822107 -23682446 + AluSx SINE Alu 1 306 -6 1039 283 113 32 chr17 65822112 65822207 -23682346 + L1ME3A LINE L1 5262 5348 -822 2002 119 3 30 chr17 65822207 65822502 -23682051 + AluSx SINE Alu 1 287 -25 1039 283 113 32 chr17 65822502 65822752 -23681801 + L1ME3A LINE L1 5348 5576 -594 942 240 23 18 chr17 65822752 65822969 -23681584 - MER58A DNA MER1_type -3 221 4 1039 283 113 32 chr17 65822969 65823215 -23681338 + L1ME3A LINE L1 5576 5902 -268 2667 148 31 85 chr17 65823216 65823333 -23681220 - MER44D DNA MER2_type -1883 604 482 2226 98 10 3 chr17 65823333 65823628 -23680925 - AluSc SINE Alu -12 297 1 2667 148 31 85 chr17 65823628 65824085 -23680468 - MER44D DNA MER2_type -2005 482 6 1919 70 0 4 chr17 65824135 65824365 -23680188 + AluSg SINE Alu 1 229 -81 2322 103 3 0 chr17 65824797 65825098 -23679455 + AluSp SINE Alu 1 302 -11 1990 121 11 4 chr17 65825112 65825453 -23679100 + AluSc SINE Alu 1 343 0 1017 65 73 0 chr17 65826360 65826484 -23678069 + AluSg SINE Alu 1 133 -177 2317 118 0 0 chr17 65826484 65826790 -23677763 + AluSq SINE Alu 1 306 -7 1841 107 4 4 chr17 65826953 65827205 -23677348 + AluSx SINE Alu 45 296 -16 2427 89 0 16 chr17 65827362 65827676 -23676877 + AluSp SINE Alu 1 309 -4 2184 116 0 19 chr17 65828409 65828727 -23675826 - AluSx SINE Alu 0 312 1 757 97 19 0 chr17 65828765 65828868 -23675685 - U6 snRNA snRNA -2 105 1 1353 136 68 0 chr17 65830952 65831173 -23673380 - MER46A DNA MER2_type 0 236 1 1177 128 0 22 chr17 65831223 65831403 -23673150 - AluSg/x SINE Alu -3 309 134 2232 108 3 0 chr17 65831403 65831699 -23672854 - AluSg SINE Alu -13 297 1 1575 113 0 0 chr17 65831735 65831938 -23672615 - AluSc SINE Alu -106 203 1 1653 236 144 13 chr17 65832043 65832514 -23672039 - MLT1F LTR MaLR -9 533 1 1525 172 19 19 chr17 65832722 65832989 -23671564 - AluJo SINE Alu -16 296 30 245 258 65 11 chr17 65833026 65833119 -23671434 - L1MDa LINE L1 -4182 2358 2261 1127 155 0 0 chr17 65833119 65833293 -23671260 + AluJb SINE Alu 135 308 -4 1049 190 0 0 chr17 65833329 65833503 -23671050 + FAM SINE Alu 1 174 -1 2345 116 0 0 chr17 65833519 65833830 -23670723 + AluSx SINE Alu 1 311 -1 1824 155 14 0 chr17 65833869 65834147 -23670406 + AluSx SINE Alu 1 282 -30 420 0 20 0 chr17 65834147 65834198 -23670355 + (TAA)n Simple_repeat Simple_repeat 1 180 0 498 215 133 66 chr17 65834203 65834423 -23670130 + L1MDa LINE L1 1578 1819 -4721 1868 122 104 0 chr17 65834423 65834702 -23669851 + AluSx SINE Alu 1 308 -4 498 215 133 66 chr17 65834702 65834737 -23669816 + L1MDa LINE L1 1819 1850 -4690 459 301 0 96 chr17 65835149 65835368 -23669185 + MIR SINE MIR 63 260 -2 1838 125 86 0 chr17 65835408 65835687 -23668866 + AluSx SINE Alu 1 303 -9 2332 94 3 0 chr17 65837098 65837396 -23667157 + AluSp SINE Alu 1 299 -14 2218 105 3 16 chr17 65837451 65837764 -23666789 + AluSx SINE Alu 1 309 -3 364 324 17 28 chr17 65838028 65838207 -23666346 + L1ME4a LINE L1 5651 5827 -294 862 219 72 93 chr17 65838642 65838974 -23665579 - L1MC/D LINE L1 -2017 5791 5454 2518 64 0 13 chr17 65838974 65839286 -23665267 - AluY SINE Alu -2 309 2 862 219 72 93 chr17 65839286 65839319 -23665234 - L1MC/D LINE L1 -2354 5454 5422 841 147 9 0 chr17 65839319 65839435 -23665118 - FLAM_C SINE Alu -15 118 2 862 219 72 93 chr17 65839435 65839552 -23665001 - L1MC/D LINE L1 -2386 5422 5318 698 188 125 28 chr17 65839862 65840006 -23664547 - AluJb SINE Alu -21 291 134 2350 101 0 0 chr17 65840006 65840313 -23664240 - AluSg SINE Alu -3 307 1 525 188 188 0 chr17 65840313 65840451 -23664102 - Charlie1 DNA MER1_type -411 2350 2187 1662 103 146 4 chr17 65840480 65840741 -23663812 - AluSp SINE Alu -15 298 1 2230 175 38 17 chr17 65840790 65841207 -23663346 - L1MC1 LINE L1 -10 6323 5898 502 186 10 0 chr17 65841207 65841309 -23663244 - Charlie1 DNA MER1_type -602 2159 2057 463 213 206 35 chr17 65841317 65841458 -23663095 - Charlie1 DNA MER1_type -2595 166 2 21 0 0 0 chr17 65842275 65842296 -23662257 + AT_rich Low_complexity Low_complexity 1 21 0 2072 121 3 7 chr17 65842349 65842655 -23661898 + AluSq SINE Alu 1 305 -8 651 183 70 9 chr17 65842658 65842773 -23661780 + FLAM_C SINE Alu 2 123 -10 32 0 0 0 chr17 65842773 65842805 -23661748 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr17 65842905 65842940 -23661613 + AT_rich Low_complexity Low_complexity 1 35 0 1487 175 88 0 chr17 65843654 65843917 -23660636 + AluJb SINE Alu 1 286 -26 1626 124 127 8 chr17 65843950 65844209 -23660344 + AluSg1 SINE Alu 1 290 -19 310 203 127 0 chr17 65844307 65844386 -23660167 - MER3 DNA MER1_type 0 209 121 2434 51 0 51 chr17 65844490 65844804 -23659749 + AluY SINE Alu 1 298 -13 966 156 24 18 chr17 65845002 65845169 -23659384 + AluJb SINE Alu 128 295 -17 833 117 70 0 chr17 65845171 65845299 -23659254 + AluJo SINE Alu 1 137 -175 1948 110 69 3 chr17 65845300 65845591 -23658962 + AluSq SINE Alu 4 313 0 2089 130 3 13 chr17 65845593 65845901 -23658652 + AluSx SINE Alu 1 305 -7 670 116 0 21 chr17 65845998 65846113 -23658440 - AluSg/x SINE Alu 0 299 187 1826 143 43 4 chr17 65846722 65847001 -23657552 + AluSx SINE Alu 1 290 -22 1698 178 31 0 chr17 65847372 65847664 -23656889 - AluJb SINE Alu -10 302 2 375 225 112 81 chr17 65847692 65847815 -23656738 - L1M1 LINE L1 -370 5751 5668 2267 99 3 0 chr17 65847815 65848107 -23656446 - AluSp SINE Alu -19 294 2 375 225 112 81 chr17 65848107 65848178 -23656375 - L1M1 LINE L1 -453 5668 5601 252 236 0 42 chr17 65848346 65848418 -23656135 - L1MC/D LINE L1 -750 5609 5541 1410 209 106 9 chr17 65848418 65848749 -23655804 - MLT1F LTR MaLR 0 542 180 338 154 46 15 chr17 65848736 65848801 -23655752 + MLT1F LTR MaLR 148 214 -328 * 1103 261 74 33 chr17 65848910 65849274 -23655279 - L2 LINE L2 -5 3308 2930 1293 159 102 12 chr17 65849287 65849532 -23655021 - AluJo SINE Alu -12 300 34 1373 116 5 0 chr17 65849561 65849750 -23654803 - AluSq SINE Alu -12 301 112 237 159 0 0 chr17 65849818 65849862 -23654691 + T-rich Low_complexity Low_complexity 1 44 0 813 126 0 0 chr17 65849888 65849999 -23654554 - AluSq SINE Alu -202 111 1 1332 239 51 116 chr17 65850010 65850733 -23653820 - L2 LINE L2 -865 2449 1774 2267 114 0 0 chr17 65850965 65851262 -23653291 - AluSx SINE Alu -15 297 1 212 244 0 0 chr17 65851628 65851669 -23652884 - L2 LINE L2 -88 3225 3185 1843 153 17 3 chr17 65851717 65852005 -23652548 - AluSq SINE Alu -21 292 1 2354 104 0 0 chr17 65852023 65852331 -23652222 - AluSx SINE Alu -4 308 1 361 355 126 22 chr17 65852358 65852589 -23651964 - L2 LINE L2 -181 3091 2837 445 206 0 0 chr17 65852631 65852699 -23651854 + AluJ/FLAM SINE Alu 2 69 -243 238 253 0 13 chr17 65902775 65902854 -23601699 + L1M4 LINE L1 4272 4349 -1797 21 36 0 0 chr17 65902858 65902886 -23601667 + AT_rich Low_complexity Low_complexity 1 28 0 2081 138 10 0 chr17 65902990 65903295 -23601258 + AluSx SINE Alu 1 308 -4 363 290 68 6 chr17 65903483 65903645 -23600908 + L1M4 LINE L1 3137 3308 -2838 2404 237 91 40 chr17 65903778 65903967 -23600586 + L1M4 LINE L1 3566 3744 -2402 2062 101 34 24 chr17 65903967 65904263 -23600290 + AluSp SINE Alu 1 299 -14 2404 237 91 40 chr17 65904263 65905115 -23599438 + L1M4 LINE L1 3744 4660 -1486 4453 161 12 11 chr17 65905136 65905887 -23598666 + Tigger1 DNA MER2_type 4 755 -1663 361 326 56 9 chr17 65906047 65906262 -23598291 + MER41B LTR ERV1 181 405 -230 953 128 18 18 chr17 65906477 65906641 -23597912 + Tigger1 DNA MER2_type 2150 2313 -105 503 268 57 19 chr17 65907184 65907393 -23597160 - MER112 DNA MER1_type -14 246 30 323 303 9 28 chr17 65907595 65907704 -23596849 - MIR3 SINE MIR -9 199 93 268 308 96 20 chr17 65908957 65909155 -23595398 + L1M4 LINE L1 4753 4965 -1181 232 299 0 10 chr17 65909212 65909309 -23595244 - L1M4 LINE L1 -2634 3512 3417 1535 156 48 22 chr17 65909516 65909785 -23594768 - AluJb SINE Alu -32 280 5 206 118 0 0 chr17 65909918 65909952 -23594601 + (T)n Simple_repeat Simple_repeat 1 34 0 301 293 147 8 chr17 65910018 65910284 -23594269 - L1MCc LINE L1 -2290 4651 4349 * 480 209 217 4 chr17 65910281 65910530 -23594023 - L1MCc LINE L1 -3668 3273 2972 301 183 0 24 chr17 65910585 65910667 -23593886 + (TATATG)n Simple_repeat Simple_repeat 1 80 0 308 195 49 12 chr17 65910703 65910785 -23593768 - L1MC4 LINE L1 -1339 6703 6619 282 153 153 0 chr17 65910815 65910887 -23593666 - L1MC4 LINE L1 -1339 6703 6621 218 329 13 0 chr17 65910895 65910974 -23593579 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 242 154 0 19 chr17 65910984 65911036 -23593517 - L1MC4 LINE L1 -1340 6702 6652 315 172 69 35 chr17 65911071 65911158 -23593395 - L1MC4 LINE L1 -1339 6703 6614 225 229 0 73 chr17 65911073 65911169 -23593384 + L1MC4 LINE L1 6614 6702 -1340 * 247 278 118 7 chr17 65911198 65911342 -23593211 - L1MCc LINE L1 -5037 1386 1227 769 178 0 15 chr17 65912199 65912334 -23592219 - FLAM_A SINE Alu 0 133 1 1755 158 7 17 chr17 65912412 65912703 -23591850 - AluJo SINE Alu -24 288 1 346 236 11 0 chr17 65914268 65914357 -23590196 - L1MC5 LINE L1 -171 7790 7701 276 149 0 0 chr17 65915505 65915552 -23589001 + (TA)n Simple_repeat Simple_repeat 2 48 0 2239 118 0 0 chr17 65916335 65916641 -23587912 - AluSx SINE Alu -6 306 1 292 247 170 16 chr17 65916674 65916856 -23587697 + L1ME3A LINE L1 5949 6158 -12 2181 104 0 25 chr17 65918602 65918919 -23585634 - AluSc SINE Alu 0 309 1 581 192 85 0 chr17 65918919 65919049 -23585504 - L1M4 LINE L1 -392 5786 5646 711 152 149 73 chr17 65919069 65919283 -23585270 - L1M4 LINE L1 -743 5403 5173 2512 54 0 0 chr17 65919283 65919605 -23584948 - AluY SINE Alu 0 322 1 711 152 149 73 chr17 65919605 65919777 -23584776 - L1M4 LINE L1 -973 5173 5016 * 42938 31 21 2 chr17 65919772 65925806 -23578747 - L1PA2 LINE L1 -1 6154 5 772 160 69 69 chr17 65925811 65925999 -23578554 - L1M4 LINE L1 -1121 5025 4838 21 0 0 0 chr17 65926830 65926851 -23577702 + AT_rich Low_complexity Low_complexity 1 21 0 2387 96 3 0 chr17 65928503 65928806 -23575747 + AluSx SINE Alu 1 304 -8 13334 214 45 38 chr17 65929986 65930644 -23573909 - L1PB4 LINE L1 0 6858 6206 2205 108 14 0 chr17 65930644 65930940 -23573613 - AluSp SINE Alu -13 300 1 13334 214 45 38 chr17 65930940 65931649 -23572904 - L1PB4 LINE L1 -652 6206 5503 2075 149 0 7 chr17 65931649 65931957 -23572596 - AluSx SINE Alu -6 306 1 13334 214 45 38 chr17 65931957 65932095 -23572458 - L1PB4 LINE L1 -1355 5503 5367 225 0 0 0 chr17 65932095 65932120 -23572433 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 13334 214 45 38 chr17 65932120 65934092 -23570461 - L1PB4 LINE L1 -1491 5367 3410 1933 143 20 0 chr17 65934092 65934386 -23570167 + AluSx SINE Alu 1 300 -12 13334 214 45 38 chr17 65934386 65935749 -23568804 - L1PB4 LINE L1 -3448 3410 2058 196 42 0 0 chr17 65935749 65935773 -23568780 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1566 156 0 105 chr17 65935773 65936088 -23568465 - AluJo SINE Alu -30 282 1 13334 214 45 38 chr17 65936088 65937552 -23567001 - L1PB4 LINE L1 -4800 2058 606 2171 126 0 0 chr17 65937552 65937845 -23566708 - AluSg SINE Alu -17 293 1 13334 214 45 38 chr17 65937845 65937940 -23566613 - L1PB4 LINE L1 -6252 606 513 2342 121 13 0 chr17 65937940 65938255 -23566298 + 7SLRNA srpRNA srpRNA 1 319 -1 13334 214 45 38 chr17 65938255 65938683 -23565870 - L1PB4 LINE L1 -6345 513 31 239 228 33 87 chr17 65938706 65938798 -23565755 - L1MC4a LINE L1 -1877 5931 5845 2009 141 0 13 chr17 65938976 65939280 -23565273 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr17 65939288 65939310 -23565243 + (TTG)n Simple_repeat Simple_repeat 2 23 0 336 120 0 0 chr17 65941552 65941602 -23562951 - AluJo SINE Alu -6 296 247 1044 171 86 0 chr17 65941606 65941781 -23562772 - AluJo SINE Alu -121 191 2 2268 85 0 0 chr17 65942173 65942493 -23562060 + AluSg SINE Alu 1 320 0 1438 202 0 4 chr17 65942599 65942851 -23561702 + AluJb SINE Alu 1 251 -61 477 290 68 11 chr17 65942890 65943169 -23561384 + L1MC/D LINE L1 3494 3788 -2358 382 200 89 15 chr17 65943348 65943483 -23561070 + L1MC/D LINE L1 3822 3966 -2180 2110 203 50 63 chr17 65943667 65944287 -23560266 - LTR9 LTR ERV1 0 612 1 441 310 42 7 chr17 65946996 65947138 -23557415 + MIR SINE MIR 2 148 -114 22 35 0 0 chr17 65949009 65949038 -23555515 + AT_rich Low_complexity Low_complexity 1 29 0 2145 127 0 16 chr17 65949161 65949339 -23555214 - AluSx SINE Alu -1 311 139 2051 130 7 3 chr17 65949339 65949647 -23554906 - AluSx SINE Alu -3 309 1 2145 127 0 16 chr17 65949647 65949784 -23554769 - AluSx SINE Alu -173 139 1 23 68 0 0 chr17 65950288 65950332 -23554221 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr17 65951444 65951467 -23553086 + AT_rich Low_complexity Low_complexity 1 23 0 375 220 59 75 chr17 65952571 65952625 -23551928 + L1MC/D LINE L1 5314 5367 -2441 1845 163 111 49 chr17 65952625 65953031 -23551522 + Tigger2a DNA MER2_type 3 433 -1 375 220 59 75 chr17 65953031 65953162 -23551391 + L1MC/D LINE L1 5367 5496 -2312 2292 212 54 52 chr17 65953323 65953724 -23550829 - L1MD2 LINE L1 -143 6216 5812 2463 81 0 3 chr17 65953724 65954032 -23550521 - AluY SINE Alu -4 307 1 2292 212 54 52 chr17 65954032 65954318 -23550235 - L1MD2 LINE L1 -547 5812 5528 1207 261 62 7 chr17 65954320 65954737 -23549816 + L1MDa LINE L1 1791 2230 -4310 620 211 135 14 chr17 65954747 65955237 -23549316 + L1M4 LINE L1 5135 5818 -356 * 3608 168 15 67 chr17 65955195 65955645 -23548908 - L1MB4 LINE L1 -8 6172 5787 2004 152 3 0 chr17 65955645 65955942 -23548611 - AluSx SINE Alu -14 298 1 3608 168 15 67 chr17 65955942 65956352 -23548201 - L1MB4 LINE L1 -393 5787 5357 1451 162 29 0 chr17 65956358 65956630 -23547923 - L1MA4A LINE L1 -11 6292 6013 2272 130 22 40 chr17 65956630 65956741 -23547812 - L1M2 LINE L1 -4783 2066 1955 2393 80 0 3 chr17 65956741 65957040 -23547513 - AluY SINE Alu -11 300 3 2272 130 22 40 chr17 65957040 65957378 -23547175 - L1M2 LINE L1 -4894 1955 1624 2214 95 3 10 chr17 65957378 65957672 -23546881 - AluSc SINE Alu -17 292 1 2272 130 22 40 chr17 65957672 65957720 -23546833 - L1M2 LINE L1 -5225 1624 1577 228 152 22 0 chr17 65957871 65957917 -23546636 + L1MDa LINE L1 2355 2401 -4320 346 295 104 12 chr17 65957920 65958093 -23546460 + L1MDa LINE L1 2374 2562 -3980 539 164 44 69 chr17 65958122 65958160 -23546393 + L1MDa LINE L1 2663 2700 -3840 4507 119 92 25 chr17 65958160 65958638 -23545915 + L1PA16 LINE L1 5000 5444 -722 2207 92 0 0 chr17 65958638 65958972 -23545581 + AluY SINE Alu 1 334 0 4507 119 92 25 chr17 65958972 65959412 -23545141 + L1PA16 LINE L1 5444 5994 -172 2482 15 0 0 chr17 65959412 65959686 -23544867 + AluYa5 SINE Alu 32 305 -6 4507 119 92 25 chr17 65959686 65959872 -23544681 + L1PA16 LINE L1 5994 6166 0 539 164 44 69 chr17 65959872 65959992 -23544561 + L1MDa LINE L1 2700 2817 -3723 2429 72 0 0 chr17 65960214 65960504 -23544049 - AluSg SINE Alu -20 290 1 1808 248 83 9 chr17 65960629 65961271 -23543282 + L1MDa LINE L1 2956 3644 -2896 30 27 0 0 chr17 65963145 65963182 -23541371 + AT_rich Low_complexity Low_complexity 1 37 0 561 184 0 0 chr17 65963184 65963271 -23541282 - FLAM_C SINE Alu -25 118 32 281 345 0 0 chr17 65963424 65963542 -23541011 - L1MC4a LINE L1 -454 7354 7250 291 227 58 140 chr17 65963638 65963845 -23540708 - L1MC5 LINE L1 -772 7189 7000 1794 143 16 101 chr17 65963875 65964270 -23540283 - MER46B DNA MER2_type 0 236 1 195 417 49 14 chr17 65965061 65965205 -23539348 + L2 LINE L2 3115 3263 -9 2200 98 10 13 chr17 65965300 65965635 -23538918 - AluSc SINE Alu 0 336 3 227 266 119 18 chr17 65965823 65965932 -23538621 + Charlie4 DNA MER1_type 151 270 -1691 25 51 0 0 chr17 65965974 65966013 -23538540 + AT_rich Low_complexity Low_complexity 1 39 0 1394 190 27 37 chr17 65967227 65967527 -23537026 + AluJo SINE Alu 1 297 -15 26 64 0 0 chr17 65967602 65967649 -23536904 + AT_rich Low_complexity Low_complexity 1 47 0 4097 44 0 4 chr17 65967654 65968156 -23536397 - L1PA3 LINE L1 -3 6152 5653 2181 107 3 7 chr17 65968551 65968840 -23535713 - AluSx SINE Alu -24 288 1 2081 140 0 7 chr17 65969352 65969660 -23534893 - AluSx SINE Alu -6 306 1 322 152 0 152 chr17 65969771 65969863 -23534690 + MIR SINE MIR 84 161 -101 1998 159 0 0 chr17 65969874 65970176 -23534377 + AluJb SINE Alu 1 302 -10 195 359 13 0 chr17 65970315 65970393 -23534160 + L2 LINE L2 3188 3266 -6 2523 64 0 6 chr17 65970543 65970855 -23533698 + AluY SINE Alu 1 310 -1 2047 117 28 0 chr17 65970977 65971267 -23533286 + AluSx SINE Alu 1 298 -14 493 210 18 11 chr17 65972105 65972327 -23532226 - ORSL DNA AcHobo -1 274 1 1412 147 5 27 chr17 65972961 65973185 -23531368 + AluSx SINE Alu 1 219 -93 213 39 0 0 chr17 65973185 65973211 -23531342 + (CAATG)n Simple_repeat Simple_repeat 2 27 0 24 77 0 0 chr17 65973419 65973471 -23531082 + AT_rich Low_complexity Low_complexity 1 52 0 7508 27 0 0 chr17 65973945 65975278 -23529275 - L1PA4 LINE L1 0 6155 4819 229 206 15 15 chr17 65975528 65975596 -23528957 - L1ME3A LINE L1 -8 6162 6095 345 74 102 5 chr17 65976101 65976277 -23528276 - AluSc SINE Alu -10 289 1 1139 227 150 19 chr17 65976277 65976789 -23527764 + L1MD3 LINE L1 4644 5087 -1079 455 0 18 0 chr17 65976789 65976844 -23527709 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 1139 227 150 19 chr17 65976844 65977232 -23527321 + L1MD3 LINE L1 5087 5423 -743 2148 125 3 7 chr17 65977232 65977537 -23527016 + AluSx SINE Alu 1 304 -8 1139 227 150 19 chr17 65977537 65977905 -23526648 + L1MD3 LINE L1 5423 6161 -5 24 0 0 0 chr17 65978125 65978149 -23526404 + AT_rich Low_complexity Low_complexity 1 24 0 31 0 0 0 chr17 65979626 65979657 -23524896 + AT_rich Low_complexity Low_complexity 1 31 0 1949 104 3 10 chr17 65980227 65980545 -23524008 + AluSx SINE Alu 1 316 0 32 0 0 0 chr17 65980650 65980682 -23523871 + AT_rich Low_complexity Low_complexity 1 32 0 308 272 37 0 chr17 65980918 65980999 -23523554 + L1ME LINE L1 466 549 -5981 260 241 11 11 chr17 65981014 65981101 -23523452 + L1ME LINE L1 2318 2404 -4136 3046 246 157 25 chr17 65981212 65983001 -23521552 + L1ME LINE L1 2416 4462 -2078 1447 231 181 68 chr17 65983039 65983602 -23520951 + L1ME LINE L1 4528 5026 -1514 2029 141 7 0 chr17 65983602 65983922 -23520631 + AluSx SINE Alu 1 312 0 2298 71 7 0 chr17 65983923 65984206 -23520347 + AluY SINE Alu 2 286 -25 1447 231 181 68 chr17 65984206 65984511 -23520042 + L1ME LINE L1 5025 5497 -1043 1810 178 0 3 chr17 65984711 65985014 -23519539 + AluJo SINE Alu 1 302 -10 207 250 0 0 chr17 65985779 65985847 -23518706 + (CATA)n Simple_repeat Simple_repeat 3 70 0 784 246 18 0 chr17 65985889 65986060 -23518493 - MER63A DNA MER1_type -28 182 9 248 222 69 69 chr17 65986106 65986178 -23518375 - MIR SINE MIR -13 249 178 23 33 0 0 chr17 65986149 65986179 -23518374 + AT_rich Low_complexity Low_complexity 1 30 0 * 2071 104 0 64 chr17 65986179 65986507 -23518046 - AluSg SINE Alu -3 307 1 2243 123 0 0 chr17 65986957 65987258 -23517295 - AluSg SINE Alu -9 301 1 1711 132 7 66 chr17 65987354 65987658 -23516895 - AluJo SINE Alu -26 286 1 1023 138 85 0 chr17 65987667 65987855 -23516698 - L1MA4 LINE L1 -6 6294 6091 748 220 92 72 chr17 65987877 65988336 -23516217 + L1MC5 LINE L1 7327 7794 -167 280 259 95 9 chr17 65988399 65988515 -23516038 + L1MC5 LINE L1 7503 7628 -333 453 146 124 22 chr17 65988573 65988662 -23515891 - FLAM_C SINE Alu -14 129 32 389 271 55 18 chr17 65988693 65988911 -23515642 + L1MC5 LINE L1 7689 7914 -47 309 275 58 36 chr17 65989139 65989277 -23515276 - L1M4 LINE L1 -1774 4372 4232 2202 113 13 7 chr17 65989844 65990154 -23514399 - AluSx SINE Alu 0 312 1 29 0 0 0 chr17 65990373 65990402 -23514151 + AT_rich Low_complexity Low_complexity 1 29 0 2282 104 0 0 chr17 65990403 65990702 -23513851 - AluSx SINE Alu -13 299 1 4675 125 16 4 chr17 65990704 65991440 -23513113 - L1PA13 LINE L1 -11 6152 5408 3899 152 4 18 chr17 65991442 65991818 -23512735 - L1PA13 LINE L1 -788 5358 4995 2195 114 0 0 chr17 65991818 65992107 -23512446 - AluSq SINE Alu -15 298 10 3899 152 4 18 chr17 65992107 65992465 -23512088 - L1PA13 LINE L1 -1151 4995 4634 487 152 76 9 chr17 65992483 65992588 -23511965 - L1MB3 LINE L1 -7 6176 6065 1547 250 71 18 chr17 65993241 65993469 -23511084 - L1MC4 LINE L1 -129 7913 7699 1967 94 30 27 chr17 65993469 65993766 -23510787 - AluSc SINE Alu -11 298 1 1547 250 71 18 chr17 65993766 65994368 -23510185 - L1MC4 LINE L1 -343 7699 6887 242 194 243 19 chr17 65995419 65995522 -23509031 + MER53 DNA DNA 51 176 -13 * 255 148 33 16 chr17 65995484 65995545 -23509008 - MER53 DNA DNA -127 62 1 757 190 54 11 chr17 65995599 65995783 -23508770 - L1MB7 LINE L1 -12 6172 5981 401 321 65 0 chr17 65995794 65995962 -23508591 + MIR SINE MIR 68 246 -16 1229 279 58 0 chr17 65995977 65996325 -23508228 + L1MC/D LINE L1 36 403 -5993 1607 214 181 20 chr17 65996354 65996991 -23507562 + L1MC/D LINE L1 4243 4981 -1234 494 225 50 0 chr17 65996995 65997115 -23507438 + L1MC/D LINE L1 5051 5176 -1039 1678 173 0 7 chr17 65997122 65997399 -23507154 + AluJo SINE Alu 18 292 -20 411 171 0 0 chr17 65997453 65997535 -23507018 + L1MC/D LINE L1 5192 5273 -942 443 184 112 56 chr17 65997595 65997720 -23506833 + L1MC/D LINE L1 5580 5711 -600 713 274 100 35 chr17 65997785 65998213 -23506340 - MLT1D LTR MaLR -8 497 12 1478 201 45 126 chr17 65998225 65998756 -23505797 - MLT1D-int LTR MaLR -1 1370 883 1154 236 44 7 chr17 65998861 65999132 -23505421 - MLT1D-int LTR MaLR -486 885 605 461 164 97 109 chr17 65999344 65999509 -23505044 - MLT2C1 LTR ERVL 0 397 235 21 0 0 0 chr17 65999564 65999585 -23504968 + AT_rich Low_complexity Low_complexity 1 21 0 463 196 41 0 chr17 65999585 65999682 -23504871 - L1MC3 LINE L1 -1 7784 7684 14892 193 28 33 chr17 65999696 65999874 -23504679 - L1MA4 LINE L1 -16 6337 6160 572 147 10 10 chr17 65999874 65999976 -23504577 - U13 snRNA snRNA -2 102 1 14892 193 28 33 chr17 65999976 66001638 -23502915 - L1MA4 LINE L1 -193 6160 4492 2552 60 0 0 chr17 66001638 66001937 -23502616 - AluY SINE Alu -12 299 1 14892 193 28 33 chr17 66001937 66003309 -23501244 - L1MA4 LINE L1 -1861 4492 3115 2322 82 31 0 chr17 66003309 66003603 -23500950 - AluSq SINE Alu -10 303 1 14892 193 28 33 chr17 66003603 66004729 -23499824 - L1MA4 LINE L1 -3238 3115 1986 1574 165 81 8 chr17 66004729 66004989 -23499564 - AluSx SINE Alu -32 280 2 14892 193 28 33 chr17 66004989 66005994 -23498559 - L1MA4 LINE L1 -4367 1986 978 261 0 0 0 chr17 66005994 66006023 -23498530 + (TTG)n Simple_repeat Simple_repeat 2 30 0 14892 193 28 33 chr17 66006023 66006261 -23498292 - L1MA4 LINE L1 -5375 978 740 1299 198 6 69 chr17 66006261 66006579 -23497974 - AluJo SINE Alu -14 298 1 14892 193 28 33 chr17 66006579 66007301 -23497252 - L1MA4 LINE L1 -5613 740 1 1095 257 96 18 chr17 66007319 66008014 -23496539 + L1ME LINE L1 875 1608 -4607 334 264 132 14 chr17 66008319 66008692 -23495861 + L1ME LINE L1 2120 2530 -3685 415 265 155 0 chr17 66008759 66008978 -23495575 + L1ME LINE L1 2512 2764 -3451 907 268 19 30 chr17 66009061 66009326 -23495227 - HERVL40 LTR ERVL -2064 3466 3205 598 266 50 0 chr17 66009347 66009486 -23495067 - MER58B DNA MER1_type -1 340 195 1382 268 100 25 chr17 66009532 66010003 -23494550 - HERVL40 LTR ERVL -2363 3167 2662 318 242 134 40 chr17 66010154 66010303 -23494250 - HERVL40 LTR ERVL -3913 1617 1455 1819 147 16 26 chr17 66010489 66010796 -23493757 - AluJo SINE Alu -8 304 1 307 292 9 28 chr17 66011496 66011611 -23492942 - L1MD2 LINE L1 -89 6077 5973 213 39 0 0 chr17 66011631 66011657 -23492896 + (TA)n Simple_repeat Simple_repeat 2 27 0 2032 115 4 0 chr17 66011657 66011936 -23492617 - AluSx SINE Alu -32 280 1 352 262 30 95 chr17 66012030 66012198 -23492355 + MER5A DNA MER1_type 33 189 0 2857 16 0 0 chr17 66013027 66013345 -23491208 - AluYb8 SINE Alu 0 318 1 2647 165 22 45 chr17 66013573 66014065 -23490488 - L1MB7 LINE L1 -8 6176 5699 2260 75 17 3 chr17 66014065 66014360 -23490193 - AluY SINE Alu -4 307 9 2647 165 22 45 chr17 66014360 66014467 -23490086 - L1MB7 LINE L1 -485 5699 5591 5441 75 17 3 chr17 66014486 66015205 -23489348 - SVA Other Other -3 1383 655 1383 212 17 30 chr17 66015224 66015521 -23489032 - AluJo SINE Alu -18 294 2 252 0 0 0 chr17 66015536 66015564 -23488989 + (TTA)n Simple_repeat Simple_repeat 3 30 0 16253 27 5 1 chr17 66015564 66018252 -23486301 - L1PA3 LINE L1 -18 6137 3441 1127 170 39 26 chr17 66018264 66018573 -23485980 - L1MB7 LINE L1 -600 5574 5182 1812 176 0 10 chr17 66018574 66018880 -23485673 - AluJb SINE Alu -9 303 1 207 0 0 0 chr17 66018880 66018903 -23485650 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1474 179 4 12 chr17 66018923 66019180 -23485373 - AluJo SINE Alu -57 255 1 2195 113 0 10 chr17 66019327 66019627 -23484926 - AluSx SINE Alu -15 297 1 745 202 69 21 chr17 66019709 66019897 -23484656 - MIR SINE MIR 0 262 66 216 246 14 14 chr17 66020052 66020121 -23484432 + (TA)n Simple_repeat Simple_repeat 2 70 0 29 0 0 0 chr17 66020338 66020367 -23484186 + AT_rich Low_complexity Low_complexity 1 29 0 856 153 0 8 chr17 66020375 66020499 -23484054 - FRAM SINE Alu -36 140 18 1199 189 47 4 chr17 66020657 66020911 -23483642 + MER58 DNA MER1_type 2154 2418 -2 1172 102 23 0 chr17 66022531 66022707 -23481846 - L1MA3 LINE L1 0 6305 6126 1350 95 0 128 chr17 66022710 66022774 -23481779 - L1MA1 LINE L1 -6 6296 6225 2420 96 0 0 chr17 66022774 66023076 -23481477 + AluSx SINE Alu 3 304 -8 1350 95 0 128 chr17 66023076 66023183 -23481370 - L1MA1 LINE L1 -77 6225 6170 2155 134 0 3 chr17 66023183 66023489 -23481064 - AluSq SINE Alu -6 307 3 1350 95 0 128 chr17 66023489 66023589 -23480964 - L1MA1 LINE L1 -132 6170 6059 11135 154 24 31 chr17 66023589 66023797 -23480756 - L1MA2 LINE L1 -166 6138 5930 2107 123 0 0 chr17 66023797 66024081 -23480472 - AluSx SINE Alu -28 284 1 11135 154 24 31 chr17 66024081 66026315 -23478238 - L1MA2 LINE L1 -374 5930 3733 225 65 0 0 chr17 66026315 66026346 -23478207 + (CTAGT)n Simple_repeat Simple_repeat 5 35 0 11135 154 24 31 chr17 66026346 66027126 -23477427 - L1MA2 LINE L1 -2571 3733 2949 497 264 55 55 chr17 66027492 66027674 -23476879 + MER58A DNA MER1_type 37 218 -6 26 0 0 0 chr17 66028412 66028438 -23476115 + AT_rich Low_complexity Low_complexity 1 26 0 2166 115 0 3 chr17 66028695 66028990 -23475563 - AluSg SINE Alu -16 294 1 618 210 94 116 chr17 66029062 66029434 -23475119 - L1ME3A LINE L1 -92 6078 5715 239 235 176 0 chr17 66029447 66029532 -23475021 - L1ME3A LINE L1 -527 5637 5538 2190 206 73 4 chr17 66029675 66030170 -23474383 - L1MB5 LINE L1 -7 6167 5639 378 0 0 0 chr17 66030234 66030276 -23474277 + (CA)n Simple_repeat Simple_repeat 2 43 0 1416 132 18 0 chr17 66030506 66030734 -23473819 + L1PA16 LINE L1 5928 6159 -7 24 67 0 0 chr17 66030740 66030785 -23473768 + AT_rich Low_complexity Low_complexity 1 45 0 189 275 0 0 chr17 66031191 66031231 -23473322 - L2 LINE L2 -94 3219 3180 1215 224 73 67 chr17 66032043 66032508 -23472045 + Charlie4a DNA MER1_type 41 508 0 2273 77 0 45 chr17 66033026 66033199 -23471354 - AluSx SINE Alu -16 296 142 2111 117 0 29 chr17 66033199 66033506 -23471047 - AluSx SINE Alu -14 298 1 2273 77 0 45 chr17 66033506 66033642 -23470911 - AluSx SINE Alu -170 142 1 2799 263 140 33 chr17 66033785 66034996 -23469557 - L2 LINE L2 -2 3270 1872 1936 155 6 29 chr17 66034996 66035338 -23469215 - MER1B DNA MER1_type -2 335 2 2799 263 140 33 chr17 66035338 66035496 -23469057 - L2 LINE L2 -1400 1872 1732 337 176 27 0 chr17 66035527 66035601 -23468952 - L2 LINE L2 -1942 1372 1297 5144 168 31 19 chr17 66035904 66037302 -23467251 - L1PA16 LINE L1 -20 6146 4699 2131 116 0 28 chr17 66037302 66037621 -23466932 + AluSg SINE Alu 1 310 0 5144 168 31 19 chr17 66037621 66038342 -23466211 - L1PA16 LINE L1 -1467 4699 3988 693 292 99 5 chr17 66038404 66038606 -23465947 + MIR SINE MIR 28 248 -14 273 111 95 32 chr17 66040051 66040114 -23464439 - L1MC1 LINE L1 0 6333 6267 25 0 0 0 chr17 66040216 66040241 -23464312 + AT_rich Low_complexity Low_complexity 1 25 0 275 226 89 55 chr17 66040975 66041121 -23463432 - HAL1 LINE L1 0 2507 2357 * 375 230 162 45 chr17 66041107 66041372 -23463181 - HAL1 LINE L1 -1233 1274 979 354 45 0 0 chr17 66041417 66041461 -23463092 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 648 181 0 38 chr17 66041501 66041634 -23462919 - FLAM_C SINE Alu -11 132 5 330 284 21 21 chr17 66041642 66041737 -23462816 + MER5B DNA MER1_type 1 95 -83 220 100 50 67 chr17 66041781 66041841 -23462712 + T-rich Low_complexity Low_complexity 5 63 0 367 303 29 34 chr17 66041861 66042036 -23462517 - HAL1 LINE L1 -1693 814 641 3184 27 0 0 chr17 66043841 66044215 -23460338 - L1PA2 LINE L1 0 6155 5782 23 0 0 0 chr17 66044851 66044874 -23459679 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr17 66046086 66046109 -23458444 + (CA)n Simple_repeat Simple_repeat 2 24 0 180 97 0 0 chr17 66046733 66046764 -23457789 + (A)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr17 66048113 66048133 -23456420 + (T)n Simple_repeat Simple_repeat 1 20 0 228 128 0 26 chr17 66049653 66049692 -23454861 - L2 LINE L2 -1 3271 3234 1064 216 11 18 chr17 66052361 66052634 -23451919 + L1M4 LINE L1 4735 5005 -1141 * 2282 216 11 7 chr17 66052633 66053176 -23451377 + L1M4 LINE L1 4091 4635 -1511 1482 180 46 11 chr17 66053329 66053613 -23450940 - AluJo SINE Alu -8 304 11 626 173 33 159 chr17 66056255 66056335 -23448218 - L1MC4 LINE L1 -2 8040 7952 2421 90 0 0 chr17 66056335 66056646 -23447907 - AluSx SINE Alu -1 311 1 626 173 33 159 chr17 66056646 66056866 -23447687 - L1MC4 LINE L1 -90 7952 7778 1688 129 16 18 chr17 66057116 66057407 -23447146 + MER1B DNA MER1_type 1 338 -1 27 0 0 0 chr17 66057719 66057746 -23446807 + AT_rich Low_complexity Low_complexity 1 27 0 1831 148 3 20 chr17 66059099 66059404 -23445149 - AluJb SINE Alu -12 300 1 241 283 30 61 chr17 66059486 66059585 -23444968 + MIR SINE MIR 16 111 -97 2173 89 20 3 chr17 66060285 66060588 -23443965 - AluY SINE Alu -3 308 1 1350 206 31 4 chr17 66060720 66060977 -23443576 - AluJo SINE Alu -48 264 1 348 292 11 11 chr17 66063372 66063461 -23441092 + MER5A DNA MER1_type 18 106 -83 269 248 37 64 chr17 66063551 66063660 -23440893 - MER112 DNA MER1_type -153 107 2 21 36 0 0 chr17 66065323 66065351 -23439202 + AT_rich Low_complexity Low_complexity 1 28 0 691 260 63 54 chr17 66065690 66065913 -23438640 + MIR SINE MIR 36 260 -2 21 0 0 0 chr17 66066036 66066057 -23438496 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 66067885 66067906 -23436647 + AT_rich Low_complexity Low_complexity 1 21 0 225 196 0 20 chr17 66068700 66068751 -23435802 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 21 89 0 0 chr17 66069057 66069113 -23435440 + AT_rich Low_complexity Low_complexity 1 56 0 885 176 39 44 chr17 66071245 66071427 -23433126 - MER5A DNA MER1_type -1 188 8 531 279 102 19 chr17 66071398 66071613 -23432940 - MIR SINE MIR -27 235 3 * 291 116 0 0 chr17 66072286 66072329 -23432224 - MADE1 DNA Mariner -37 43 1 298 356 19 10 chr17 66073178 66073282 -23431271 - MIR SINE MIR -110 152 48 2395 82 3 0 chr17 66073348 66073654 -23430899 + AluSg SINE Alu 1 307 -3 516 157 12 0 chr17 66073718 66073801 -23430752 - Tigger7 DNA MER2_type 0 2487 2404 1399 159 90 0 chr17 66073814 66074059 -23430494 - Tigger7 DNA MER2_type -2220 267 1 971 155 17 17 chr17 66074946 66075120 -23429433 - L1MC1 LINE L1 -3 6330 6157 1541 131 0 0 chr17 66075536 66075750 -23428803 + AluSq SINE Alu 3 216 -97 294 115 0 0 chr17 66075750 66075802 -23428751 + AluSq SINE Alu 252 303 0 473 226 161 0 chr17 66076119 66076155 -23428398 - L1MA10 LINE L1 0 6334 6299 705 289 54 8 chr17 66076155 66076321 -23428232 - L1ME1 LINE L1 -47 6119 5937 1988 70 93 11 chr17 66076321 66076591 -23427962 - AluSc SINE Alu -11 298 7 705 289 54 8 chr17 66076591 66076666 -23427887 - L1ME1 LINE L1 -229 5937 5867 1841 128 35 0 chr17 66076703 66076991 -23427562 - AluSx SINE Alu 0 312 15 2290 173 87 26 chr17 66077018 66077470 -23427083 - L1MB7 LINE L1 -24 6160 5674 2308 82 7 0 chr17 66077470 66077764 -23426789 - AluY SINE Alu -15 296 1 2290 173 87 26 chr17 66077764 66077807 -23426746 - L1MB7 LINE L1 -510 5674 5635 198 135 54 0 chr17 66079904 66079941 -23424612 - L2 LINE L2 -17 3296 3258 291 296 0 0 chr17 66080579 66080650 -23423903 - L2 LINE L2 -557 2757 2687 2313 105 0 6 chr17 66080650 66080964 -23423589 + AluSx SINE Alu 1 312 0 1928 141 0 10 chr17 66081127 66081418 -23423135 + AluSx SINE Alu 1 288 -24 4386 154 42 49 chr17 66081478 66082214 -23422339 + MER6 DNA MER2_type 1 732 -133 2388 67 0 0 chr17 66082214 66082511 -23422042 + AluY SINE Alu 5 301 -10 4386 154 42 49 chr17 66082511 66082645 -23421908 + MER6 DNA MER2_type 732 865 0 194 275 0 0 chr17 66082706 66082746 -23421807 + MIR SINE MIR 42 81 -127 1797 138 39 7 chr17 66082821 66083104 -23421449 - AluSc SINE Alu -16 293 2 1819 181 0 13 chr17 66083273 66083577 -23420976 + AluJo SINE Alu 3 302 -10 1914 128 0 4 chr17 66083577 66083850 -23420703 + AluSx SINE Alu 1 272 -40 294 29 0 0 chr17 66083860 66083895 -23420658 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 1053 39 8 34 chr17 66083894 66084156 -23420397 + (TA)n Simple_repeat Simple_repeat 1 255 0 1999 144 24 12 chr17 66084438 66084777 -23419776 + MER2 DNA MER2_type 2 344 0 1147 252 21 18 chr17 66086269 66086555 -23417998 + L1MEc LINE L1 43 329 -6067 733 233 0 0 chr17 66086584 66086730 -23417823 + MER58A DNA MER1_type 47 192 -32 442 268 128 6 chr17 66086742 66086921 -23417632 + L1MEc LINE L1 334 534 -5862 1406 201 4 11 chr17 66087085 66087348 -23417205 + AluJo SINE Alu 25 285 -27 1631 227 123 80 chr17 66087373 66087765 -23416788 + L1MEc LINE L1 1098 1472 -4924 2280 109 3 3 chr17 66087765 66088077 -23416476 - AluSp SINE Alu -1 312 1 1631 227 123 80 chr17 66088077 66088675 -23415878 + L1MEc LINE L1 1472 2131 -4265 414 197 74 16 chr17 66088688 66088810 -23415743 + L1MEc LINE L1 2191 2319 -3896 1215 214 31 0 chr17 66088841 66089131 -23415422 + L1MEc LINE L1 2721 3019 -3196 1754 195 150 43 chr17 66089134 66089646 -23414907 + L1MD2 LINE L1 5780 6346 -13 922 189 0 24 chr17 66089647 66089811 -23414742 - FRAM SINE Alu -21 155 1 581 231 27 23 chr17 66089839 66090060 -23414493 + L1MEc LINE L1 3032 3253 -2962 860 243 75 18 chr17 66090081 66090468 -23414085 - L1MEc LINE L1 -5013 1383 975 2107 126 7 0 chr17 66090752 66091061 -23413492 - AluSq SINE Alu -2 311 1 1728 158 3 34 chr17 66092427 66092718 -23411835 - AluJb SINE Alu -30 282 1 49 66 0 0 chr17 66094496 66094587 -23409966 + AT_rich Low_complexity Low_complexity 1 91 0 241 229 49 0 chr17 66095502 66095563 -23408990 + MIR SINE MIR 85 148 -60 498 273 21 82 chr17 66096993 66097115 -23407438 + MIR SINE MIR 16 123 -139 2550 74 0 0 chr17 66097115 66097426 -23407127 - AluY SINE Alu 0 311 1 498 273 21 82 chr17 66097426 66097497 -23407056 + MIR SINE MIR 123 197 -65 1605 101 5 5 chr17 66097788 66098007 -23406546 + AluSx SINE Alu 1 219 -93 228 313 0 0 chr17 66098020 66098087 -23406466 + GA-rich Low_complexity Low_complexity 1 67 0 2362 75 0 28 chr17 66098159 66098479 -23406074 - AluY SINE Alu 0 311 1 22 70 0 0 chr17 66100200 66100243 -23404310 + AT_rich Low_complexity Low_complexity 1 43 0 7274 117 13 18 chr17 66100655 66101300 -23403253 - HSMAR2 DNA Mariner -1 1301 663 2228 103 6 6 chr17 66101300 66101611 -23402942 - AluY SINE Alu 0 311 1 7274 117 13 18 chr17 66101611 66102078 -23402475 - HSMAR2 DNA Mariner -639 663 195 242 0 0 0 chr17 66102074 66102102 -23402451 - HSMAR2 DNA Mariner -1273 29 2 * 945 190 6 23 chr17 66102194 66102368 -23402185 + FAM SINE Alu 1 171 -4 423 106 0 0 chr17 66105300 66105366 -23399187 + (TA)n Simple_repeat Simple_repeat 1 66 0 237 268 0 14 chr17 66105449 66105481 -23399072 + (TA)n Simple_repeat Simple_repeat 1 32 -38 2247 118 3 0 chr17 66105481 66105786 -23398767 + AluSc SINE Alu 1 306 -3 237 268 0 14 chr17 66105786 66105824 -23398729 + (TA)n Simple_repeat Simple_repeat 32 70 0 22 0 0 0 chr17 66106993 66107015 -23397538 + AT_rich Low_complexity Low_complexity 1 22 0 2237 117 7 0 chr17 66107600 66107900 -23396653 + AluSx SINE Alu 1 302 -10 306 0 0 0 chr17 66108411 66108445 -23396108 + (TA)n Simple_repeat Simple_repeat 2 35 0 204 67 0 0 chr17 66108983 66109013 -23395540 + (CAA)n Simple_repeat Simple_repeat 2 31 0 570 273 139 24 chr17 66109473 66109638 -23394915 - MER5A DNA MER1_type -2 187 4 731 179 0 54 chr17 66110269 66110453 -23394100 - L1MC5 LINE L1 -48 7913 7740 216 333 67 0 chr17 66110532 66110607 -23393946 - L2 LINE L2 -7 3306 3227 183 80 0 0 chr17 66110721 66110746 -23393807 + (A)n Simple_repeat Simple_repeat 1 25 0 377 322 72 41 chr17 66110749 66110963 -23393590 + L2 LINE L2 2799 3016 -297 233 228 263 9 chr17 66111555 66111669 -23392884 + L1ME LINE L1 5518 5660 -461 1619 197 7 10 chr17 66111872 66112177 -23392376 + AluJo SINE Alu 1 304 -8 485 148 0 23 chr17 66112190 66112278 -23392275 + L1MC1 LINE L1 6235 6320 -13 183 250 23 0 chr17 66112372 66112416 -23392137 + L2 LINE L2 3220 3264 -8 193 163 41 0 chr17 66113233 66113282 -23391271 + (TA)n Simple_repeat Simple_repeat 1 51 0 2097 136 0 0 chr17 66113372 66113659 -23390894 - AluSx SINE Alu -25 287 1 1021 128 6 67 chr17 66113922 66114101 -23390452 - AluJo SINE Alu -142 170 3 23 68 0 0 chr17 66115173 66115217 -23389336 + AT_rich Low_complexity Low_complexity 1 44 0 2395 46 0 0 chr17 66115280 66115597 -23388956 + AluY SINE Alu 1 317 0 26 0 0 0 chr17 66115808 66115834 -23388719 + AT_rich Low_complexity Low_complexity 1 26 0 229 196 22 0 chr17 66116101 66116147 -23388406 + (TG)n Simple_repeat Simple_repeat 2 48 0 421 279 117 45 chr17 66117565 66117624 -23386929 + L2 LINE L2 2351 2404 -910 2006 115 0 0 chr17 66117624 66117925 -23386628 - AluSx SINE Alu 0 316 16 2028 130 0 40 chr17 66117927 66118249 -23386304 - AluSx SINE Alu -3 309 1 421 279 117 45 chr17 66118249 66118475 -23386078 + L2 LINE L2 2404 2661 -653 2089 93 0 55 chr17 66118507 66118819 -23385734 + AluSg SINE Alu 1 295 -15 645 131 41 8 chr17 66120274 66120396 -23384157 - L1MB7 LINE L1 -21 6163 6038 543 267 17 33 chr17 66120392 66120572 -23383981 - L1MC5 LINE L1 -18 7943 7767 * 334 273 39 39 chr17 66120701 66120829 -23383724 - MLT1L LTR MaLR -339 276 149 200 299 130 0 chr17 66121401 66121478 -23383075 + L2 LINE L2 3227 3313 0 1557 120 0 5 chr17 66121639 66121856 -23382697 - AluSc SINE Alu -11 298 83 2116 128 0 13 chr17 66124133 66124437 -23380116 - AluSx SINE Alu -12 300 1 1968 141 3 0 chr17 66125945 66126258 -23378295 + AluSx SINE Alu 1 314 0 2564 64 0 6 chr17 66127562 66127876 -23376677 - AluSx SINE Alu 0 312 1 2201 89 4 0 chr17 66128693 66128999 -23375554 - AluSg SINE Alu 0 307 1 3067 210 105 43 chr17 66129922 66130944 -23373609 - L1ME3 LINE L1 -1 6161 5203 2300 107 0 7 chr17 66130944 66131252 -23373301 - AluSx SINE Alu -6 306 1 3067 210 105 43 chr17 66131252 66131352 -23373201 - L1ME3 LINE L1 -959 5203 5111 1775 191 10 0 chr17 66131352 66131646 -23372907 + AluJb SINE Alu 1 297 -15 3067 210 105 43 chr17 66131646 66131944 -23372609 - L1ME3 LINE L1 -1051 5111 4654 3954 194 115 31 chr17 66131971 66132610 -23371943 + Charlie1a DNA MER1_type 17 780 -1981 2155 100 17 3 chr17 66132610 66132899 -23371654 + AluSp SINE Alu 1 293 -20 3954 194 115 31 chr17 66132899 66133314 -23371239 + Charlie1a DNA MER1_type 780 1159 -296 287 210 168 0 chr17 66133349 66133495 -23371058 + Charlie1 DNA MER1_type 2523 2705 -56 2024 139 10 0 chr17 66133517 66133811 -23370742 - AluSx SINE Alu -15 297 1 261 0 0 0 chr17 66133889 66133918 -23370635 + (CA)n Simple_repeat Simple_repeat 2 30 0 415 179 47 28 chr17 66133933 66134039 -23370514 - L1ME3 LINE L1 -1510 4636 4529 978 107 7 14 chr17 66134046 66134186 -23370367 - AluSg/x SINE Alu -18 294 156 235 232 136 35 chr17 66134200 66134398 -23370155 - L1ME3 LINE L1 -1631 4515 4298 1249 172 0 28 chr17 66134398 66134613 -23369940 + AluJb SINE Alu 85 293 -19 842 241 111 0 chr17 66134613 66134866 -23369687 - L1ME3 LINE L1 -1837 4309 4029 445 265 65 71 chr17 66134876 66135200 -23369353 + L1MEc LINE L1 1277 1476 -4908 2412 66 30 0 chr17 66135212 66135513 -23369040 - AluY SINE Alu -1 310 1 198 241 51 63 chr17 66135698 66135777 -23368776 - MIR SINE MIR -6 256 179 2277 96 3 0 chr17 66136888 66137181 -23367372 + AluY SINE Alu 1 294 -17 247 230 81 40 chr17 66138639 66138713 -23365840 + L2 LINE L2 3192 3268 -4 320 282 12 0 chr17 66138926 66139011 -23365542 - MIR SINE MIR -126 136 51 304 305 42 17 chr17 66140456 66140574 -23363979 - MIR SINE MIR -41 221 101 218 355 228 5 chr17 66140694 66140891 -23363662 + MIR SINE MIR 20 260 -2 289 258 277 13 chr17 66140950 66141109 -23363444 - MIR SINE MIR -52 210 10 22 35 0 0 chr17 66142362 66142391 -23362162 + AT_rich Low_complexity Low_complexity 1 29 0 2219 100 3 10 chr17 66143470 66143771 -23360782 - AluSp SINE Alu -14 299 1 2277 129 83 25 chr17 66143931 66144280 -23360273 + MER44D DNA MER2_type 87 522 -1965 1768 176 29 35 chr17 66144280 66144626 -23359927 + MER7A DNA MER2_type 1 342 -4 2277 129 83 25 chr17 66144626 66144710 -23359843 + MER44D DNA MER2_type 522 600 -5 546 243 132 34 chr17 66144729 66145054 -23359499 - L1ME4a LINE L1 -224 5897 5541 2545 70 0 0 chr17 66145127 66145429 -23359124 - AluSg SINE Alu -8 302 1 2388 226 20 20 chr17 66145431 66146042 -23358511 - L1MD2 LINE L1 -229 6524 5914 1255 193 22 67 chr17 66146046 66146657 -23357896 - L1MD2 LINE L1 -3583 2957 2320 5913 93 0 16 chr17 66146657 66146950 -23357603 - L1PB1 LINE L1 0 6151 5855 2286 116 0 0 chr17 66146950 66147251 -23357302 + AluSc SINE Alu 1 301 -8 5913 93 0 16 chr17 66147251 66147328 -23357225 - L1PB1 LINE L1 -296 5855 5778 297 0 0 0 chr17 66147328 66147361 -23357192 + (TG)n Simple_repeat Simple_repeat 2 34 0 5913 93 0 16 chr17 66147361 66148247 -23356306 - L1PB1 LINE L1 -373 5778 4900 1255 193 22 67 chr17 66148247 66148264 -23356289 - L1MD2 LINE L1 -4219 2321 2360 41102 33 21 0 chr17 66148274 66154333 -23350220 + L1PA2 LINE L1 1 6155 0 5533 226 66 40 chr17 66154341 66155355 -23349198 - L1MD2 LINE L1 -4167 2373 1386 1609 185 3 11 chr17 66155355 66155668 -23348885 + AluJo SINE Alu 1 311 0 5533 226 66 40 chr17 66155668 66155742 -23348811 - L1MD2 LINE L1 -5154 1386 1315 976 134 5 70 chr17 66155742 66155928 -23348625 - L1MC1 LINE L1 -17 6316 6143 5533 226 66 40 chr17 66155928 66156799 -23347754 - L1MD2 LINE L1 -5225 1315 284 620 320 67 7 chr17 66157267 66157670 -23346883 + L1M4 LINE L1 3660 4086 -2060 21 0 0 0 chr17 66157725 66157746 -23346807 + AT_rich Low_complexity Low_complexity 1 21 0 313 312 48 14 chr17 66157934 66158226 -23346327 + L1M4 LINE L1 4390 4691 -1455 240 236 47 9 chr17 66158258 66158364 -23346189 - L1MC4 LINE L1 -1 8041 7932 196 269 45 0 chr17 66158426 66158493 -23346060 + L2 LINE L2 1736 1805 -1509 1077 233 128 28 chr17 66158555 66159135 -23345418 - L1MC5 LINE L1 -44 7917 7280 273 229 107 38 chr17 66159636 66159767 -23344786 + L1ME4a LINE L1 5977 6116 -5 2153 100 0 0 chr17 66159792 66160072 -23344481 - AluSg1 SINE Alu -29 280 1 2189 123 0 3 chr17 66160987 66161287 -23343266 - AluSq SINE Alu -14 299 1 201 294 11 76 chr17 66161531 66161623 -23342930 + L2 LINE L2 3171 3256 -16 23 54 0 0 chr17 66162118 66162155 -23342398 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr17 66163578 66163607 -23340946 + AT_rich Low_complexity Low_complexity 1 29 0 249 273 30 15 chr17 66165275 66165341 -23339212 - MLT1I LTR MaLR -99 310 244 525 161 253 31 chr17 66165510 66165672 -23338881 - MER3 DNA MER1_type -1 208 11 232 326 22 73 chr17 66168473 66168651 -23335902 + L2 LINE L2 2595 2763 -551 2105 123 3 0 chr17 66168819 66169119 -23335434 + AluSx SINE Alu 1 301 -11 320 233 0 27 chr17 66169125 66169198 -23335355 + MIR SINE MIR 43 113 -95 210 71 0 0 chr17 66171904 66171932 -23332621 + (A)n Simple_repeat Simple_repeat 1 28 0 421 288 66 15 chr17 66172353 66172517 -23332036 - MIR SINE MIR -35 173 1 257 303 220 0 chr17 66172517 66172610 -23331943 + MIR3 SINE MIR 76 197 -11 181 277 277 20 chr17 66172694 66172842 -23331711 - MIR SINE MIR 0 262 77 1062 214 76 4 chr17 66173666 66173942 -23330611 + MER58B DNA MER1_type 40 335 -6 225 139 0 0 chr17 66174016 66174059 -23330494 + (CTG)n Simple_repeat Simple_repeat 3 45 0 759 215 102 11 chr17 66174422 66174608 -23329945 - MER20 DNA MER1_type 0 219 17 1985 131 3 3 chr17 66174621 66174903 -23329650 - AluSx SINE Alu -30 282 1 281 359 24 34 chr17 66175155 66175364 -23329189 - MIR SINE MIR -34 228 22 2284 106 7 0 chr17 66175531 66175832 -23328721 + AluSx SINE Alu 1 303 -9 917 209 40 5 chr17 66176125 66176326 -23328227 + MER3 DNA MER1_type 2 209 0 226 391 74 47 chr17 66177712 66177968 -23326585 - L2 LINE L2 -44 3228 2966 2202 113 0 3 chr17 66177998 66178289 -23326264 + AluSx SINE Alu 1 290 -22 21 36 0 0 chr17 66178759 66178787 -23325766 + AT_rich Low_complexity Low_complexity 1 28 0 1807 188 0 0 chr17 66179320 66179618 -23324935 + AluJo SINE Alu 1 298 -14 2472 73 0 0 chr17 66179665 66179965 -23324588 + AluSc SINE Alu 1 300 -9 509 249 140 36 chr17 66180143 66180364 -23324189 - MIR SINE MIR -14 248 5 377 256 43 24 chr17 66180745 66180909 -23323644 + L1MC5 LINE L1 7751 7917 -44 2243 111 3 0 chr17 66181572 66181878 -23322675 + AluSx SINE Alu 1 307 -5 1799 143 10 36 chr17 66184151 66184452 -23320101 - AluJb SINE Alu -10 302 10 1776 146 3 53 chr17 66184970 66185126 -23319427 - AluJb SINE Alu -23 289 154 2259 102 0 3 chr17 66185126 66185420 -23319133 - AluSx SINE Alu -19 293 1 1776 146 3 53 chr17 66185420 66185565 -23318988 - AluJb SINE Alu -158 154 3 2356 95 3 0 chr17 66185749 66186054 -23318499 + AluSp SINE Alu 1 306 -7 226 184 69 161 chr17 66186353 66186440 -23318113 - MIR SINE MIR -1 261 183 338 280 56 16 chr17 66186515 66186640 -23317913 - Charlie8 DNA MER1_type -2193 224 95 232 213 16 16 chr17 66186678 66186739 -23317814 - MIR SINE MIR -54 208 148 239 246 0 15 chr17 66189115 66189169 -23315384 + (CTA)n Simple_repeat Simple_repeat 3 57 -9 1305 149 30 30 chr17 66189169 66189404 -23315149 + MER46A DNA MER2_type 1 235 -1 239 246 0 15 chr17 66189404 66189414 -23315139 + (CTA)n Simple_repeat Simple_repeat 57 66 0 285 233 19 78 chr17 66189501 66189515 -23315038 - L2 LINE L2 -2 3270 3257 1635 195 35 0 chr17 66189515 66189802 -23314751 - AluJb SINE Alu -15 297 1 285 233 19 78 chr17 66189802 66189890 -23314663 - L2 LINE L2 -15 3257 3174 542 106 78 0 chr17 66190052 66190155 -23314398 - LTR12 LTR ERV1 0 714 73 308 200 33 22 chr17 66190157 66190247 -23314306 - LTR30 LTR ERV1 -79 643 553 645 113 42 190 chr17 66190248 66190497 -23314056 - LTR12 LTR ERV1 -429 1523 100 238 231 0 0 chr17 66190497 66190549 -23314004 - LTR30 LTR ERV1 -670 52 1 231 204 0 0 chr17 66192231 66192280 -23312273 + GA-rich Low_complexity Low_complexity 4 52 0 1809 150 3 29 chr17 66192482 66192788 -23311765 - AluJo SINE Alu -14 298 1 255 152 0 0 chr17 66195598 66195644 -23308909 + CT-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr17 66198079 66198100 -23306453 + AT_rich Low_complexity Low_complexity 1 21 0 271 167 0 0 chr17 66201038 66201080 -23303473 - L2 LINE L2 -3 3310 3269 2507 59 0 0 chr17 66201187 66201490 -23303063 + AluY SINE Alu 1 303 -8 2316 88 3 35 chr17 66201749 66202068 -23302485 + AluSp SINE Alu 1 309 -4 1718 148 53 92 chr17 66202320 66202417 -23302136 + MSTD LTR MaLR 1 100 -296 665 180 8 23 chr17 66202417 66202545 -23302008 + FLAM_C SINE Alu 3 128 -5 1718 148 53 92 chr17 66202545 66202859 -23301694 + MSTD LTR MaLR 100 396 0 2148 114 40 0 chr17 66203460 66203757 -23300796 + AluSp SINE Alu 1 309 -4 21 57 0 0 chr17 66203758 66203793 -23300760 + AT_rich Low_complexity Low_complexity 1 35 0 449 335 60 0 chr17 66203857 66204039 -23300514 - MIR SINE MIR -55 207 15 2162 133 0 0 chr17 66204436 66204738 -23299815 - AluSx SINE Alu -6 306 5 1584 157 0 96 chr17 66204747 66205091 -23299462 - AluJo SINE Alu -1 311 1 307 317 89 16 chr17 66205357 66205480 -23299073 - MIR3 SINE MIR -46 162 31 709 146 0 0 chr17 66207501 66207604 -23296949 - FLAM_C SINE Alu -27 116 14 2144 112 3 0 chr17 66207903 66208198 -23296355 - AluSx SINE Alu -16 296 1 1696 246 74 32 chr17 66208262 66208323 -23296230 + L1MEc LINE L1 65 122 -6274 2449 77 0 6 chr17 66208323 66208636 -23295917 - AluY SINE Alu 0 311 1 1696 246 74 32 chr17 66208636 66209127 -23295426 + L1MEc LINE L1 122 640 -5756 2619 211 45 58 chr17 66209211 66209669 -23294884 + L1MEc LINE L1 1972 2435 -3780 1619 189 19 39 chr17 66209669 66209976 -23294577 - AluJo SINE Alu -10 302 2 2619 211 45 58 chr17 66209976 66210398 -23294155 + L1MEc LINE L1 2435 2861 -3354 2301 52 7 14 chr17 66210398 66210687 -23293866 + AluY SINE Alu 1 287 -24 2619 211 45 58 chr17 66210687 66210748 -23293805 + L1MEc LINE L1 2861 2921 -3294 2206 67 3 14 chr17 66210748 66211053 -23293500 + AluY SINE Alu 1 302 0 2619 211 45 58 chr17 66211053 66211212 -23293341 + L1MEc LINE L1 2921 3081 -3134 1991 129 10 7 chr17 66211212 66211507 -23293046 + AluSx SINE Alu 1 296 -16 2619 211 45 58 chr17 66211507 66211670 -23292883 + L1MEc LINE L1 3081 3187 -3028 1487 188 4 11 chr17 66211670 66211936 -23292617 + AluJo SINE Alu 30 293 -19 2619 211 45 58 chr17 66211936 66211994 -23292559 + L1MEc LINE L1 3187 3244 -2971 317 70 0 18 chr17 66212133 66212190 -23292363 - L1MA8 LINE L1 -4 6287 6232 2545 159 27 45 chr17 66212194 66212747 -23291806 - L1MA7 LINE L1 -136 6155 5613 1643 173 61 4 chr17 66213168 66213446 -23291107 + AluJo SINE Alu 1 294 -18 623 165 0 0 chr17 66213635 66213744 -23290809 - L1MA7 LINE L1 -664 5627 5519 424 231 0 31 chr17 66213762 66213892 -23290661 + L1ME1 LINE L1 5204 5329 -817 1971 159 0 10 chr17 66213898 66214212 -23290341 + AluJo SINE Alu 1 311 -1 26 30 0 0 chr17 66214302 66214335 -23290218 + AT_rich Low_complexity Low_complexity 1 33 0 1713 161 0 14 chr17 66214570 66214906 -23289647 - AluJb SINE Alu 0 332 1 2835 231 23 25 chr17 66214922 66215755 -23288798 + L1ME1 LINE L1 5315 6145 -21 21 0 0 0 chr17 66217126 66217147 -23287406 + AT_rich Low_complexity Low_complexity 1 21 0 212 194 0 0 chr17 66217901 66217937 -23286616 + T-rich Low_complexity Low_complexity 1 36 0 310 213 125 0 chr17 66218876 66218956 -23285597 + L2 LINE L2 3192 3281 -32 1633 150 22 29 chr17 66218980 66219253 -23285300 + AluJo SINE Alu 1 271 -41 1569 197 3 10 chr17 66219909 66220208 -23284345 - AluJo SINE Alu -5 307 11 406 218 28 28 chr17 66220399 66220541 -23284012 - L1MC5 LINE L1 -48 7913 7772 1210 212 68 15 chr17 66220543 66220869 -23283684 - L1MB8 LINE L1 -2 6176 5834 42 48 0 0 chr17 66221431 66221494 -23283059 + AT_rich Low_complexity Low_complexity 1 63 0 316 202 18 34 chr17 66221540 66221698 -23282855 - MER82 DNA MER2_type -247 406 200 555 178 68 74 chr17 66222115 66222278 -23282275 - MER82 DNA MER2_type -485 168 7 2922 212 81 18 chr17 66222299 66223142 -23281411 + L1ME1 LINE L1 5255 6149 -17 24 0 0 0 chr17 66223341 66223365 -23281188 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 66224105 66224126 -23280427 + AT_rich Low_complexity Low_complexity 1 21 0 2497 68 0 0 chr17 66224761 66225054 -23279499 - AluY SINE Alu -18 293 1 201 74 0 0 chr17 66225862 66225889 -23278664 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 1793 180 27 0 chr17 66226874 66227169 -23277384 + AluJb SINE Alu 2 304 -8 264 333 207 34 chr17 66227291 66228277 -23276276 - L2 LINE L2 -337 2977 1821 2279 111 0 3 chr17 66228288 66228595 -23275958 + AluSx SINE Alu 1 306 -6 1179 142 9 75 chr17 66228595 66228639 -23275914 + AluJo SINE Alu 83 128 -184 2132 121 16 0 chr17 66228639 66228945 -23275608 - AluSq SINE Alu 0 313 3 1179 142 9 75 chr17 66228945 66229112 -23275441 + AluJo SINE Alu 128 280 -32 863 168 147 42 chr17 66229129 66229320 -23275233 + AluJo SINE Alu 82 292 -20 2287 78 0 0 chr17 66229538 66229854 -23274699 + AluY SINE Alu 1 316 0 265 242 93 82 chr17 66229963 66230009 -23274544 + L1MEd LINE L1 1062 1106 -5013 2288 99 0 3 chr17 66230009 66230311 -23274242 + AluSx SINE Alu 3 303 -9 265 242 93 82 chr17 66230311 66230458 -23274095 + L1MEd LINE L1 1106 1257 -4862 347 330 68 55 chr17 66230461 66230697 -23273856 + HAL1 LINE L1 1373 1611 -896 2146 137 0 0 chr17 66231025 66231332 -23273221 + AluSx SINE Alu 2 308 -4 2576 68 3 0 chr17 66231520 66231830 -23272723 + AluSp SINE Alu 1 311 -2 2198 119 0 0 chr17 66231879 66232182 -23272371 + AluSx SINE Alu 1 303 -9 195 42 0 0 chr17 66232186 66232210 -23272343 + (GGGGA)n Simple_repeat Simple_repeat 2 25 0 2327 96 3 3 chr17 66232502 66232803 -23271750 + AluSq SINE Alu 1 301 -12 1886 136 0 60 chr17 66233406 66233723 -23270830 - AluJb SINE Alu -14 298 1 490 214 0 10 chr17 66233730 66233828 -23270725 - FLAM_A SINE Alu -20 122 26 243 263 147 11 chr17 66235590 66235685 -23268868 - MIR3 SINE MIR -11 197 90 182 354 152 0 chr17 66236049 66236148 -23268405 + L2 LINE L2 3149 3262 -10 2500 75 0 0 chr17 66236177 66236484 -23268069 - AluY SINE Alu -4 307 1 312 380 117 0 chr17 66238394 66238602 -23265951 - MIR SINE MIR 0 262 31 2294 94 0 3 chr17 66239804 66240102 -23264451 - AluSg SINE Alu -13 297 1 207 0 0 0 chr17 66240104 66240127 -23264426 + (T)n Simple_repeat Simple_repeat 1 23 0 181 207 0 0 chr17 66240135 66240164 -23264389 - MIR SINE MIR -30 232 204 1174 72 0 20 chr17 66240178 66240331 -23264222 - AluY SINE Alu -11 300 151 406 294 63 0 chr17 66240343 66240469 -23264084 - MIR SINE MIR -109 153 20 29 28 0 0 chr17 66240537 66240573 -23263980 + AT_rich Low_complexity Low_complexity 1 36 0 26 50 0 0 chr17 66241103 66241143 -23263410 + AT_rich Low_complexity Low_complexity 1 40 0 2066 136 13 0 chr17 66241197 66241498 -23263055 - AluSq SINE Alu -6 307 3 1600 156 82 4 chr17 66242814 66243083 -23261470 + AluJb SINE Alu 1 290 -22 2359 103 0 3 chr17 66244562 66244874 -23259679 + AluSp SINE Alu 1 311 -2 677 302 31 0 chr17 66245384 66245576 -23258977 - MIR SINE MIR -59 203 6 355 264 96 16 chr17 66245580 66245705 -23258848 - L1ME LINE L1 -315 5806 5672 846 194 0 29 chr17 66250271 66250446 -23254107 - FRAM SINE Alu -6 170 1 181 177 31 21 chr17 66250587 66250683 -23253870 + (TA)n Simple_repeat Simple_repeat 2 98 0 180 297 78 16 chr17 66251093 66251157 -23253396 + L2 LINE L2 3170 3237 -35 2185 104 0 0 chr17 66251198 66251512 -23253041 - AluSg SINE Alu 0 314 1 1845 145 11 7 chr17 66252130 66252442 -23252111 + AluSx SINE Alu 1 313 0 2435 73 0 22 chr17 66252447 66252760 -23251793 + AluY SINE Alu 1 306 -5 365 267 112 12 chr17 66253350 66253511 -23251042 + MIR3 SINE MIR 30 206 -2 516 244 289 0 chr17 66253808 66253943 -23250610 + MER5B DNA MER1_type 1 174 -4 23 54 0 0 chr17 66254071 66254108 -23250445 + AT_rich Low_complexity Low_complexity 1 37 0 2263 75 14 0 chr17 66254561 66254886 -23249667 - AluSx SINE Alu 0 329 1 2189 88 0 7 chr17 66255044 66255350 -23249203 + AluY SINE Alu 1 304 0 256 263 175 0 chr17 66256804 66256918 -23247635 - MER94 DNA DNA 0 134 1 2337 105 0 0 chr17 66258058 66258363 -23246190 + AluSg SINE Alu 1 305 -5 2480 61 3 0 chr17 66258863 66259158 -23245395 + AluY SINE Alu 1 296 -15 456 267 157 47 chr17 66259838 66260074 -23244479 + MIR SINE MIR 1 262 0 324 246 61 18 chr17 66260390 66260504 -23244049 + MIR3 SINE MIR 84 202 -6 2310 91 10 13 chr17 66261196 66261503 -23243050 - AluSx SINE Alu -6 306 1 202 322 210 23 chr17 66262395 66262609 -23241944 - L2 LINE L2 -215 3057 2804 255 294 10 49 chr17 66262641 66262743 -23241810 + MIR SINE MIR 32 129 -133 433 196 0 0 chr17 66262748 66262845 -23241708 - MER3 DNA MER1_type 0 2511 2415 578 120 0 0 chr17 66262855 66262956 -23241597 - MER3 DNA MER1_type -98 111 35 740 129 0 52 chr17 66264123 66264239 -23240314 + FLAM_A SINE Alu 18 127 -15 451 234 66 15 chr17 66264758 66264895 -23239658 - MIR SINE MIR -10 252 109 6304 108 37 90 chr17 66266456 66267139 -23237414 + Tigger1 DNA MER2_type 2 687 -1731 593 145 0 0 chr17 66267139 66267222 -23237331 - AluJ/FLAM SINE Alu -228 84 2 6304 108 37 90 chr17 66267222 66267598 -23236955 + Tigger1 DNA MER2_type 687 1082 -1336 2235 107 0 0 chr17 66267887 66268177 -23236376 + AluSx SINE Alu 1 290 -22 297 0 0 0 chr17 66268187 66268220 -23236333 + (CA)n Simple_repeat Simple_repeat 2 34 0 4993 109 44 19 chr17 66268384 66269009 -23235544 - L1PA16 LINE L1 -3 6163 5472 907 144 0 43 chr17 66269009 66269148 -23235405 - FLAM_C SINE Alu 0 133 1 4993 109 44 19 chr17 66269148 66269454 -23235099 - L1PA16 LINE L1 -694 5472 5175 220 272 98 0 chr17 66269461 66269553 -23235000 - MIR SINE MIR -113 149 49 1703 171 26 26 chr17 66269632 66269942 -23234611 + AluJo SINE Alu 1 310 -2 2218 105 16 0 chr17 66269969 66270275 -23234278 + AluY SINE Alu 1 311 0 321 299 45 51 chr17 66271623 66271780 -23232773 + MIR3 SINE MIR 29 184 -24 189 0 0 0 chr17 66272828 66272849 -23231704 + (A)n Simple_repeat Simple_repeat 1 21 0 2110 110 4 0 chr17 66272920 66273231 -23231322 - AluSx SINE Alu 0 312 1 216 184 0 0 chr17 66273244 66273282 -23231271 - MIR SINE MIR -43 219 182 224 265 0 0 chr17 66273745 66273794 -23230759 + A-rich Low_complexity Low_complexity 1 49 0 2303 85 0 3 chr17 66274371 66274664 -23229889 - AluY SINE Alu -19 292 1 180 273 36 0 chr17 66274669 66274724 -23229829 - MIR SINE MIR -10 252 196 183 349 53 30 chr17 66274815 66274947 -23229606 - L2 LINE L2 -221 3051 2917 2408 130 13 145 chr17 66275142 66275695 -23228858 + LTR12 LTR ERV1 1 480 -234 338 345 35 0 chr17 66275732 66275845 -23228708 - MIR SINE MIR -133 129 13 1227 130 6 0 chr17 66276091 66276268 -23228285 - AluSq SINE Alu -7 306 129 2365 82 7 0 chr17 66276272 66276563 -23227990 - AluSq SINE Alu -18 295 3 195 42 0 0 chr17 66278149 66278173 -23226380 + (CAG)n Simple_repeat Simple_repeat 1 24 0 418 322 194 5 chr17 66278180 66278391 -23226162 - MIR SINE MIR -6 256 6 2175 107 13 10 chr17 66278413 66278713 -23225840 + AluSx SINE Alu 1 301 -11 2178 69 0 28 chr17 66279480 66279769 -23224784 + AluY SINE Alu 7 287 -24 2343 103 3 0 chr17 66280039 66280339 -23224214 + AluSp SINE Alu 1 301 -12 434 140 35 123 chr17 66280909 66280954 -23223599 - L1MA10 LINE L1 -7 6327 6280 2317 74 0 27 chr17 66280954 66281250 -23223303 - AluSc SINE Alu -17 292 5 434 140 35 123 chr17 66281250 66281318 -23223235 - L1MA10 LINE L1 -54 6280 6224 1491 140 0 42 chr17 66281339 66281603 -23222950 - L1MA10 LINE L1 -477 5835 5583 1225 188 0 25 chr17 66281861 66282100 -23222453 - AluJo SINE Alu -43 269 37 386 248 106 25 chr17 66282172 66282370 -23222183 - L1ME4a LINE L1 -1 6120 5907 2457 82 0 0 chr17 66282626 66282930 -23221623 + AluY SINE Alu 1 304 -7 2711 94 13 8 chr17 66283043 66283416 -23221137 - THE1C LTR MaLR 0 375 1 866 168 8 0 chr17 66283427 66283558 -23220995 - FLAM_A SINE Alu -1 132 1 271 294 54 22 chr17 66284014 66284106 -23220447 - MIR SINE MIR -81 127 33 1845 154 37 0 chr17 66284243 66284542 -23220011 + AluJb SINE Alu 1 310 -2 402 21 0 0 chr17 66284837 66284884 -23219669 + (TG)n Simple_repeat Simple_repeat 1 47 0 2402 89 0 3 chr17 66287048 66287361 -23217192 + AluSq SINE Alu 1 312 -1 356 272 95 41 chr17 66288746 66288915 -23215638 + MIR3 SINE MIR 24 201 -7 2381 82 3 3 chr17 66289332 66289638 -23214915 + AluSq SINE Alu 1 306 -7 190 349 61 15 chr17 66290696 66290762 -23213791 - L3b LINE CR1 -10 1573 1505 2146 105 17 3 chr17 66290926 66291220 -23213333 - AluSx SINE Alu -14 298 1 244 209 0 90 chr17 66291247 66291314 -23213239 + MIR SINE MIR 100 160 -102 679 60 0 0 chr17 66291316 66291399 -23213154 + AluS SINE Alu 2 84 -229 283 282 87 10 chr17 66291413 66291516 -23213037 + MIR SINE MIR 149 259 -3 320 250 0 111 chr17 66291840 66291948 -23212605 - MIR3 SINE MIR -25 183 88 2404 75 0 0 chr17 66292541 66292834 -23211719 + AluSc SINE Alu 1 293 -16 279 0 0 0 chr17 66294295 66294326 -23210227 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2151 113 0 0 chr17 66294330 66294648 -23209905 - AluSx SINE Alu 0 318 1 2387 89 0 3 chr17 66295184 66295488 -23209065 + AluSg SINE Alu 1 303 -7 216 276 58 11 chr17 66295811 66295898 -23208655 + MIR SINE MIR 123 213 -49 710 200 137 31 chr17 66296418 66296647 -23207906 + MIR SINE MIR 3 254 -8 190 275 0 0 chr17 66297193 66297233 -23207320 + L2 LINE L2 3213 3252 -20 502 216 83 69 chr17 66297964 66298168 -23206385 - MIR SINE MIR -2 260 54 975 292 91 60 chr17 66299989 66300427 -23204126 + L1MC/D LINE L1 4066 4489 -1657 2248 111 0 3 chr17 66300427 66300725 -23203828 - AluSx SINE Alu -15 297 1 975 292 91 60 chr17 66300725 66300736 -23203817 + L1MC/D LINE L1 4489 4498 -1648 2417 90 3 0 chr17 66300736 66301036 -23203517 - AluSp SINE Alu -12 301 1 975 292 91 60 chr17 66301036 66301123 -23203430 + L1MC/D LINE L1 4498 4581 -1565 1698 244 60 26 chr17 66301123 66301627 -23202926 - LTR33 LTR ERVL 0 521 1 975 292 91 60 chr17 66301627 66301943 -23202610 + L1MC/D LINE L1 4581 4947 -1199 334 297 117 0 chr17 66301957 66302085 -23202468 + L1MC/D LINE L1 5456 5598 -2210 303 205 33 119 chr17 66302107 66302258 -23202295 + MIR SINE MIR 125 262 0 2086 144 3 0 chr17 66302453 66302752 -23201801 - AluSx SINE Alu -12 300 1 241 291 0 64 chr17 66303106 66303176 -23201377 + MIR SINE MIR 150 212 -50 2202 99 34 0 chr17 66303176 66303469 -23201084 + AluSp SINE Alu 1 303 -10 241 291 0 64 chr17 66303469 66303508 -23201045 + MIR SINE MIR 212 252 -10 2501 77 0 0 chr17 66305090 66305401 -23199152 - AluY SINE Alu 0 311 1 1808 122 64 10 chr17 66305500 66305795 -23198758 + AluSx SINE Alu 1 311 -1 468 188 149 0 chr17 66306449 66306603 -23197950 - L1MB2 LINE L1 0 6171 5995 1792 142 89 0 chr17 66306621 66306902 -23197651 - AluSx SINE Alu -6 306 1 3502 158 17 70 chr17 66306902 66307152 -23197401 - L1MB2 LINE L1 -263 5908 5646 2480 81 3 3 chr17 66307152 66307459 -23197094 - AluSp SINE Alu -6 307 1 3502 158 17 70 chr17 66307459 66307654 -23196899 - L1MB2 LINE L1 -525 5646 5442 186 43 0 0 chr17 66307654 66307677 -23196876 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3502 158 17 70 chr17 66307677 66307834 -23196719 - L1MB2 LINE L1 -729 5442 5278 2063 143 0 9 chr17 66307834 66308149 -23196404 - AluSx SINE Alu 0 312 1 2446 84 0 10 chr17 66308157 66308467 -23196086 - AluSx SINE Alu -5 307 1 3502 158 17 70 chr17 66308467 66308775 -23195778 - L1MB2 LINE L1 -900 5271 4948 2174 93 9 52 chr17 66308775 66309099 -23195454 - AluSp SINE Alu -1 312 3 3502 158 17 70 chr17 66309099 66309161 -23195392 - L1MB2 LINE L1 -1223 4948 4884 2434 85 3 3 chr17 66309161 66309468 -23195085 - AluSg SINE Alu -1 309 3 2016 128 38 0 chr17 66309469 66309634 -23194919 - AluSx SINE Alu -13 299 117 405 0 0 0 chr17 66309634 66309679 -23194874 + (TG)n Simple_repeat Simple_repeat 2 46 0 2016 128 38 0 chr17 66309679 66309801 -23194752 - AluSx SINE Alu -195 117 1 3502 158 17 70 chr17 66309801 66309854 -23194699 - L1MB2 LINE L1 -1287 4884 4915 1813 177 3 0 chr17 66309854 66310154 -23194399 - AluJo SINE Alu -11 301 1 3502 158 17 70 chr17 66310154 66310176 -23194377 - L1MB2 LINE L1 -1255 4916 4894 639 231 64 50 chr17 66310190 66310399 -23194154 + MER69 DNA AcHobo 2169 2385 -141 2043 131 10 22 chr17 66310399 66310711 -23193842 + AluJb SINE Alu 5 312 0 639 231 64 50 chr17 66310711 66310782 -23193771 + MER69 DNA AcHobo 2385 2453 -73 921 257 128 71 chr17 66310797 66311146 -23193407 - L1ME LINE L1 -540 1901 1573 1610 112 0 9 chr17 66311146 66311369 -23193184 - AluJb SINE Alu -6 306 86 921 257 128 71 chr17 66311369 66312006 -23192547 - L1ME LINE L1 -868 1573 974 2558 21 0 0 chr17 66312006 66312297 -23192256 - L1PA4 LINE L1 -3 6152 5862 921 257 128 71 chr17 66312297 66312326 -23192227 - L1ME LINE L1 -1467 974 948 2367 101 3 0 chr17 66312326 66312632 -23191921 - AluSx SINE Alu -5 307 1 921 257 128 71 chr17 66312632 66312668 -23191885 - L1ME LINE L1 -1493 948 734 1296 216 33 66 chr17 66312671 66312913 -23191640 + L1M4 LINE L1 4013 4239 -1907 1479 188 35 7 chr17 66312913 66313195 -23191358 - AluJo SINE Alu -22 290 1 1296 216 33 66 chr17 66313195 66313345 -23191208 + L1M4 LINE L1 4239 4392 -1754 375 246 73 68 chr17 66313368 66313559 -23190994 - MLT2F LTR ERVL -39 624 433 411 121 0 121 chr17 66313559 66313642 -23190911 - AluJ/FRAM SINE Alu -25 287 215 1013 268 91 30 chr17 66313646 66314008 -23190545 - MLT2F LTR ERVL -279 384 1 4598 164 44 38 chr17 66314062 66314113 -23190440 + L1M4 LINE L1 4281 4330 -1854 2158 105 0 14 chr17 66314113 66314422 -23190131 + AluSg SINE Alu 1 305 0 4598 164 44 38 chr17 66314422 66315025 -23189528 + L1M4 LINE L1 4330 4928 -1256 1821 178 3 3 chr17 66315025 66315328 -23189225 + AluJo SINE Alu 1 303 -9 4598 164 44 38 chr17 66315328 66316070 -23188483 + L1M4 LINE L1 4928 5683 -501 243 0 0 0 chr17 66316074 66316101 -23188452 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 2124 99 0 21 chr17 66316101 66316383 -23188170 - AluSg SINE Alu -32 278 3 903 133 7 0 chr17 66316384 66316519 -23188034 - AluJb SINE Alu -176 136 1 1987 188 53 46 chr17 66316541 66316996 -23187557 + L1MB8 LINE L1 5647 6111 -67 2202 119 14 0 chr17 66316996 66317291 -23187262 - AluSx SINE Alu -13 299 1 1987 188 53 46 chr17 66317291 66317354 -23187199 + L1MB8 LINE L1 6111 6172 -6 389 304 13 13 chr17 66318129 66318287 -23186266 - MIR3 SINE MIR -31 177 20 311 341 52 0 chr17 66318526 66318699 -23185854 + MIR SINE MIR 32 213 -49 1053 293 90 23 chr17 66319157 66319802 -23184751 - L1MC4a LINE L1 -805 5341 5209 213 156 62 0 chr17 66320956 66321020 -23183533 + (TA)n Simple_repeat Simple_repeat 2 69 0 2350 88 3 0 chr17 66321501 66321797 -23182756 - AluY SINE Alu -14 297 1 951 151 41 0 chr17 66321821 66321967 -23182586 - FRAM SINE Alu -25 151 1 3618 77 218 19 chr17 66322045 66322619 -23181934 + LTR12 LTR ERV1 1 688 0 243 0 0 0 chr17 66323276 66323303 -23181250 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr17 66323523 66323543 -23181010 + (ACTAG)n Simple_repeat Simple_repeat 5 24 0 228 298 83 71 chr17 66324901 66325011 -23179542 - L2 LINE L2 0 3272 3158 2464 58 14 0 chr17 66325011 66325302 -23179251 + AluY SINE Alu 1 295 -16 228 298 83 71 chr17 66325302 66325359 -23179194 - L2 LINE L2 -114 3158 3103 1952 162 0 0 chr17 66325489 66325797 -23178756 + AluJb SINE Alu 2 309 -3 433 226 89 14 chr17 66325872 66326018 -23178535 - MIR SINE MIR -11 251 95 312 252 17 70 chr17 66326095 66326210 -23178343 + MIR SINE MIR 38 146 -62 378 202 105 9 chr17 66328398 66328512 -23176041 + L1MC5 LINE L1 7805 7929 -32 2511 62 0 0 chr17 66328833 66329124 -23175429 - AluY SINE Alu -20 291 1 231 333 33 0 chr17 66329183 66329273 -23175280 - L2 LINE L2 0 3313 3221 2297 99 3 3 chr17 66330413 66330715 -23173838 + AluSx SINE Alu 1 302 -10 1939 143 0 7 chr17 66331812 66332099 -23172454 - AluSx SINE Alu -19 293 9 2444 78 0 13 chr17 66333715 66334024 -23170529 + AluSg SINE Alu 1 305 -5 201 239 0 0 chr17 66334693 66334739 -23169814 - L2 LINE L2 0 3313 3268 * 213 364 30 10 chr17 66334736 66334835 -23169718 - L2 LINE L2 -220 3052 2952 279 331 98 26 chr17 66334984 66335401 -23169152 - L2 LINE L2 -557 2757 2311 322 307 27 33 chr17 66336017 66336167 -23168386 + MIR3 SINE MIR 47 195 -13 297 0 0 0 chr17 66336836 66336869 -23167684 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 2047 133 0 0 chr17 66336882 66337167 -23167386 - AluSx SINE Alu -27 285 1 2530 87 0 0 chr17 66337206 66337516 -23167037 + AluY SINE Alu 1 310 -1 280 211 13 53 chr17 66337706 66337782 -23166771 - MIR SINE MIR -147 115 43 216 0 0 0 chr17 66338600 66338624 -23165929 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 972 218 95 32 chr17 66338936 66339147 -23165406 - Charlie4a DNA MER1_type -1469 492 296 987 206 98 0 chr17 66339147 66339351 -23165202 + MER58A DNA MER1_type 1 224 0 972 218 95 32 chr17 66339351 66339396 -23165157 - Charlie4a DNA MER1_type -1665 296 255 2081 95 20 17 chr17 66339396 66339692 -23164861 + AluSg SINE Alu 1 297 -13 972 218 95 32 chr17 66339692 66339857 -23164696 - Charlie4a DNA MER1_type -1706 255 16 214 325 0 0 chr17 66340609 66340686 -23163867 - MIR SINE MIR -67 195 119 203 143 0 82 chr17 66340961 66341010 -23163543 + MIR3 SINE MIR 162 206 -2 348 370 56 0 chr17 66341791 66341953 -23162600 + L2 LINE L2 3102 3272 0 222 349 123 38 chr17 66342118 66342614 -23161939 + L2 LINE L2 2482 3056 -216 2317 100 0 10 chr17 66342802 66343101 -23161452 - AluSq SINE Alu -17 296 1 613 240 127 26 chr17 66343429 66343658 -23160895 + MIR SINE MIR 7 258 -4 2305 104 0 0 chr17 66343658 66343955 -23160598 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr17 66344502 66344526 -23160027 + AT_rich Low_complexity Low_complexity 1 24 0 1606 149 13 70 chr17 66344555 66344856 -23159697 + AluJo SINE Alu 17 300 -12 207 254 17 0 chr17 66346380 66346439 -23158114 + C-rich Low_complexity Low_complexity 2 61 0 2458 106 0 0 chr17 66348316 66348628 -23155925 + AluSx SINE Alu 1 312 0 258 341 94 14 chr17 66348768 66348906 -23155647 - L2 LINE L2 -95 3177 3029 836 235 34 55 chr17 66348929 66349184 -23155369 + MIR SINE MIR 2 252 -10 2415 73 0 0 chr17 66349657 66349946 -23154607 + AluY SINE Alu 1 289 -22 196 346 25 0 chr17 66351034 66351115 -23153438 - MIR SINE MIR -19 243 161 249 333 49 8 chr17 66351256 66351379 -23153174 - MIR SINE MIR -132 130 3 567 288 38 27 chr17 66352078 66352262 -23152291 - MIR3 SINE MIR -2 206 21 192 260 122 24 chr17 66352349 66352472 -23152081 - MIR SINE MIR -113 149 15 2294 95 3 13 chr17 66353157 66353463 -23151090 - AluSx SINE Alu -9 303 1 2090 126 3 7 chr17 66354067 66354361 -23150192 + AluSx SINE Alu 1 293 -19 205 176 0 0 chr17 66354372 66354406 -23150147 + L2 LINE L2 3232 3265 -7 206 273 45 0 chr17 66354671 66354737 -23149816 + GA-rich Low_complexity Low_complexity 5 73 0 543 284 57 10 chr17 66356959 66357153 -23147400 + MIR3 SINE MIR 5 207 -1 2340 104 3 0 chr17 66357925 66358234 -23146319 - AluSx SINE Alu -2 310 1 2379 68 20 3 chr17 66358444 66358738 -23145815 + AluY SINE Alu 1 299 -12 275 316 57 85 chr17 66358951 66359165 -23145388 - MIR SINE MIR -40 222 17 250 211 213 53 chr17 66359819 66359965 -23144588 + MIR SINE MIR 12 167 -81 2403 78 0 0 chr17 66359967 66360278 -23144275 - AluSp SINE Alu 0 311 1 792 30 0 0 chr17 66360826 66360925 -23143628 + (GA)n Simple_repeat Simple_repeat 1 99 0 270 361 22 33 chr17 66361438 66361618 -23142935 + MIR SINE MIR 47 224 -38 290 298 132 18 chr17 66362169 66362283 -23142270 + L2 LINE L2 3146 3272 0 207 238 254 66 chr17 66362268 66362390 -23142163 - MIR3 SINE MIR -9 199 55 * 387 242 94 23 chr17 66362627 66362755 -23141798 + MIR3 SINE MIR 7 143 -65 713 133 117 17 chr17 66362762 66362882 -23141671 + FLAM_C SINE Alu 2 133 0 418 305 287 8 chr17 66364257 66364864 -23139689 - L2 LINE L2 -220 3052 2244 22 0 0 0 chr17 66365039 66365061 -23139492 + AT_rich Low_complexity Low_complexity 1 22 0 2383 98 7 0 chr17 66365068 66365375 -23139178 + AluSc SINE Alu 1 309 0 2112 124 0 17 chr17 66365555 66365854 -23138699 - AluSx SINE Alu -18 294 1 443 266 148 20 chr17 66365938 66366292 -23138261 + L1MC4a LINE L1 5525 5661 -460 1323 208 55 68 chr17 66366415 66366531 -23138022 - MLT1A1 LTR MaLR 0 365 249 2110 132 7 3 chr17 66366531 66366835 -23137718 + AluJb SINE Alu 3 307 -5 1323 208 55 68 chr17 66366835 66366935 -23137618 - MLT1A1 LTR MaLR -116 249 149 2454 56 0 3 chr17 66366935 66367221 -23137332 - AluSx SINE Alu -8 304 20 1323 208 55 68 chr17 66367221 66367369 -23137184 - MLT1A1 LTR MaLR -216 149 5 2609 37 0 3 chr17 66367370 66367685 -23136868 - AluY SINE Alu 0 314 1 399 293 60 0 chr17 66367954 66368070 -23136483 - L2 LINE L2 -9 3263 3141 222 37 0 0 chr17 66368277 66368304 -23136249 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 944 178 0 18 chr17 66368304 66368467 -23136086 - FRAM SINE Alu -16 160 1 557 274 60 24 chr17 66368780 66368948 -23135605 + MIR3 SINE MIR 25 198 -10 839 144 0 0 chr17 66369555 66369673 -23134880 + AluJb SINE Alu 1 118 -194 337 239 149 75 chr17 66370572 66370651 -23133902 - MIR SINE MIR -45 217 145 2385 110 0 0 chr17 66370651 66370960 -23133593 - AluSx SINE Alu -3 309 1 337 239 149 75 chr17 66370960 66371081 -23133472 - MIR SINE MIR -117 145 2 2414 101 3 0 chr17 66371656 66371964 -23132589 - AluSx SINE Alu -3 309 1 216 67 0 0 chr17 66372016 66372046 -23132507 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 304 286 13 13 chr17 66372110 66372187 -23132366 - L2 LINE L2 -85 3187 3111 468 244 50 69 chr17 66372321 66372429 -23132124 + MIR SINE MIR 79 185 -77 2344 92 10 0 chr17 66372429 66372734 -23131819 + AluSp SINE Alu 1 308 -5 468 244 50 69 chr17 66372734 66372785 -23131768 + MIR SINE MIR 185 235 -27 730 135 71 16 chr17 66373654 66373780 -23130773 + FLAM_C SINE Alu 1 133 0 234 182 36 18 chr17 66374809 66374864 -23129689 - MIR SINE MIR -89 119 64 2477 90 0 0 chr17 66374875 66375176 -23129377 + AluSx SINE Alu 1 301 -11 308 340 39 0 chr17 66375888 66375991 -23128562 - MIR SINE MIR -77 185 79 273 270 11 56 chr17 66376072 66376161 -23128392 + L2 LINE L2 3227 3311 -2 261 119 0 0 chr17 66376933 66376975 -23127578 + (A)n Simple_repeat Simple_repeat 1 42 0 2222 95 3 0 chr17 66377541 66377825 -23126728 + AluSx SINE Alu 13 297 -15 3962 258 142 42 chr17 66377825 66379417 -23125136 - L2 LINE L2 -1204 2110 360 216 352 108 40 chr17 66379481 66379657 -23124896 - MIR SINE MIR -73 189 2 1443 115 0 5 chr17 66380058 66380249 -23124304 - AluSx SINE Alu -23 289 100 727 88 0 0 chr17 66380398 66380489 -23124064 - AluSx SINE Alu -220 92 2 2191 132 7 7 chr17 66380786 66381096 -23123457 - AluSx SINE Alu -2 310 1 401 188 26 86 chr17 66381478 66381608 -23122945 - MER5A DNA MER1_type -21 168 34 413 330 110 29 chr17 66382527 66382736 -23121817 - L2 LINE L2 -51 3221 2996 300 53 0 0 chr17 66382961 66382999 -23121554 + (CA)n Simple_repeat Simple_repeat 2 39 0 207 162 0 0 chr17 66383546 66383583 -23120970 + GA-rich Low_complexity Low_complexity 3 39 0 185 321 47 19 chr17 66384454 66384560 -23119993 + L3 LINE CR1 1361 1469 -108 * 442 280 282 2 chr17 66384542 66384751 -23119802 - MIR SINE MIR -11 251 2 202 306 0 16 chr17 66384887 66384949 -23119604 - L2 LINE L2 -205 3067 3007 304 238 55 124 chr17 66384992 66385112 -23119441 - L3 LINE CR1 -200 1377 1275 2275 92 0 41 chr17 66385112 66385426 -23119127 - AluSx SINE Alu -11 301 1 304 238 55 124 chr17 66385426 66385507 -23119046 - L3 LINE CR1 -302 1275 1190 292 232 18 89 chr17 66385518 66385630 -23118923 - L2 LINE L2 -31 3241 3138 189 316 53 0 chr17 66385654 66385730 -23118823 + L2 LINE L2 3182 3261 -11 310 260 192 20 chr17 66385779 66385925 -23118628 - L2 LINE L2 -181 3091 2921 949 328 130 28 chr17 66386016 66386653 -23117900 - L2 LINE L2 -579 2735 2034 2455 87 0 0 chr17 66386796 66387096 -23117457 - AluY SINE Alu -11 300 1 23 33 0 0 chr17 66388160 66388190 -23116363 + AT_rich Low_complexity Low_complexity 1 30 0 1859 83 0 0 chr17 66388241 66388502 -23116051 + AluSg/x SINE Alu 65 325 0 972 166 49 39 chr17 66388522 66388679 -23115874 + L1MA9 LINE L1 5645 5806 -506 1855 187 0 3 chr17 66388679 66388978 -23115575 - AluJb SINE Alu -14 298 1 972 166 49 39 chr17 66388978 66389025 -23115528 + L1MA9 LINE L1 5806 5851 -461 336 217 0 0 chr17 66389130 66389190 -23115363 - L2 LINE L2 -3 3269 3210 395 350 21 0 chr17 66389565 66389705 -23114848 - MIR SINE MIR -100 162 20 314 239 111 26 chr17 66391172 66391289 -23113264 + MIR3 SINE MIR 45 171 -37 514 206 168 7 chr17 66391349 66391504 -23113049 - MER5A DNA MER1_type 0 189 10 326 237 17 76 chr17 66391558 66391676 -23112877 + MIR SINE MIR 102 212 -50 297 250 30 70 chr17 66392212 66392312 -23112241 + MIR SINE MIR 85 180 -82 598 285 68 36 chr17 66393535 66393784 -23110769 + MIR SINE MIR 2 258 -4 2385 75 3 0 chr17 66394033 66394338 -23110215 - AluSx SINE Alu -6 306 1 211 239 0 0 chr17 66395098 66395144 -23109409 + T-rich Low_complexity Low_complexity 1 46 0 311 316 45 53 chr17 66395145 66395168 -23109385 + L1M2 LINE L1 1990 2012 -4837 1392 164 104 4 chr17 66395168 66395290 -23109263 + AluJo SINE Alu 1 109 -203 353 39 0 19 chr17 66395290 66395342 -23109211 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1392 164 104 4 chr17 66395342 66395487 -23109066 + AluJo SINE Alu 109 295 -17 2239 107 0 0 chr17 66395487 66395786 -23108767 - AluSg1 SINE Alu -10 299 1 311 316 45 53 chr17 66395786 66396189 -23108364 + L1M2 LINE L1 2010 2121 -4728 652 293 154 47 chr17 66395791 66395851 -23108702 - L1ME4a LINE L1 -1 6120 6068 2008 135 3 0 chr17 66395851 66396147 -23108406 + AluSx SINE Alu 1 297 -15 652 293 154 47 chr17 66396147 66396424 -23108129 - L1ME4a LINE L1 -53 6068 5747 265 318 46 29 chr17 66396429 66396538 -23108015 - L1ME4a LINE L1 -409 5712 5597 2120 116 20 0 chr17 66396538 66396840 -23107713 - AluSx SINE Alu -4 308 1 265 318 46 29 chr17 66396840 66396903 -23107650 - L1ME4a LINE L1 -524 5597 5537 1518 144 172 37 chr17 66397335 66397540 -23107013 - LTR54B LTR ERV1 -2 496 320 1998 129 17 3 chr17 66397540 66397835 -23106718 - AluSx SINE Alu -13 299 1 1518 144 172 37 chr17 66397835 66398050 -23106503 - LTR54B LTR ERV1 -178 320 13 2112 120 10 3 chr17 66398050 66398349 -23106204 - AluSx SINE Alu -11 301 1 1518 144 172 37 chr17 66398349 66398364 -23106189 - LTR54B LTR ERV1 -485 13 1 809 173 41 137 chr17 66398443 66398807 -23105746 - MLT1B LTR MaLR -2 388 60 371 322 0 17 chr17 66398851 66398966 -23105587 - MIR SINE MIR -55 153 41 2462 177 102 21 chr17 66399655 66400136 -23104417 - MLT2B1 LTR ERVL 0 520 1 1820 139 29 0 chr17 66402478 66402773 -23101780 + AluJb SINE Alu 1 303 0 273 316 111 18 chr17 66402813 66402984 -23101569 + MIR SINE MIR 12 198 -10 346 237 167 0 chr17 66403053 66403167 -23101386 - MIR SINE MIR -16 246 114 258 81 0 0 chr17 66403365 66403402 -23101151 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 2075 105 0 0 chr17 66403402 66403678 -23100875 - AluSx SINE Alu -36 276 1 2096 125 7 0 chr17 66403905 66404201 -23100352 + AluSx SINE Alu 1 298 -14 287 262 149 9 chr17 66405662 66405769 -23098784 + MIR SINE MIR 32 153 -55 252 0 0 0 chr17 66405843 66405871 -23098682 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 755 160 0 0 chr17 66405871 66405990 -23098563 - FLAM_C SINE Alu -24 119 1 189 286 16 0 chr17 66406165 66406228 -23098325 + L2 LINE L2 1585 1648 -1666 2172 116 3 0 chr17 66408429 66408731 -23095822 - AluSg SINE Alu -7 303 1 1777 104 55 0 chr17 66409472 66409761 -23094792 + L1MA8 LINE L1 5983 6287 -4 313 303 246 0 chr17 66409770 66409912 -23094641 + MER5A DNA MER1_type 7 183 -6 413 286 115 21 chr17 66410334 66410568 -23093985 + L2 LINE L2 2067 2322 -992 299 369 88 11 chr17 66410621 66410883 -23093670 + L2 LINE L2 2792 3069 -244 2109 113 10 3 chr17 66411133 66411434 -23093119 - AluSq SINE Alu -10 303 1 1642 104 59 67 chr17 66411506 66411776 -23092777 - AluSx SINE Alu -44 268 1 1914 125 28 56 chr17 66411840 66412160 -23092393 - AluSx SINE Alu -1 311 1 2121 101 49 0 chr17 66412228 66412515 -23092038 - AluSx SINE Alu -11 301 1 341 222 101 117 chr17 66412737 66412985 -23091568 + MER112 DNA MER1_type 17 260 0 333 0 0 0 chr17 66413263 66413300 -23091253 + (TG)n Simple_repeat Simple_repeat 2 38 0 2171 117 0 10 chr17 66413609 66413917 -23090636 - AluSx SINE Alu -7 305 1 226 114 0 45 chr17 66414230 66414274 -23090279 + L3 LINE CR1 1534 1575 -2 306 246 17 93 chr17 66415595 66415713 -23088840 + MIR3 SINE MIR 85 193 -15 1558 86 0 0 chr17 66420090 66420287 -23084266 + AluSx SINE Alu 1 197 -115 2383 82 0 13 chr17 66420289 66420606 -23083947 - AluSq SINE Alu 0 313 1 782 169 0 0 chr17 66420606 66420730 -23083823 + AluSx SINE Alu 189 312 0 302 285 58 70 chr17 66422444 66422616 -23081937 - MIR3 SINE MIR -21 187 18 502 302 84 0 chr17 66424093 66424272 -23080281 - MIR SINE MIR 0 262 69 1700 142 80 0 chr17 66424828 66425117 -23079436 - AluJo SINE Alu 0 312 1 396 0 0 0 chr17 66427004 66427048 -23077505 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 238 326 235 14 chr17 66427053 66427338 -23077215 - L2 LINE L2 -15 3257 2910 256 386 15 8 chr17 66427417 66427549 -23077004 - L2 LINE L2 -498 2816 2684 332 231 29 48 chr17 66432976 66433080 -23071473 - MIR3 SINE MIR -25 183 82 383 224 51 0 chr17 66433502 66433600 -23070953 + MIR SINE MIR 48 150 -58 37 76 0 0 chr17 66435310 66435389 -23069164 + GC_rich Low_complexity Low_complexity 1 79 0 288 0 0 0 chr17 66435917 66435949 -23068604 + (CA)n Simple_repeat Simple_repeat 2 33 0 180 0 0 0 chr17 66435948 66435968 -23068585 + (CG)n Simple_repeat Simple_repeat 1 20 0 * 414 0 0 0 chr17 66436705 66436751 -23067802 + (CA)n Simple_repeat Simple_repeat 2 47 0 21 36 0 0 chr17 66437653 66437681 -23066872 + GC_rich Low_complexity Low_complexity 1 28 0 180 111 0 0 chr17 66437995 66438022 -23066531 + (CAGCC)n Simple_repeat Simple_repeat 5 31 0 59 38 0 0 chr17 66438133 66438213 -23066340 + GC_rich Low_complexity Low_complexity 1 80 0 276 120 0 0 chr17 66438391 66438441 -23066112 + (CGG)n Simple_repeat Simple_repeat 2 51 0 213 204 0 0 chr17 66438624 66438673 -23065880 + (CGGG)n Simple_repeat Simple_repeat 4 52 0 212 162 0 0 chr17 66440721 66440758 -23063795 + T-rich Low_complexity Low_complexity 5 41 0 301 209 33 77 chr17 66440767 66440858 -23063695 - L1MDa LINE L1 -4038 2502 2416 308 333 48 54 chr17 66440868 66441054 -23063499 + HAL1 LINE L1 1053 1237 -1270 200 413 6 29 chr17 66442981 66443153 -23061400 + MIR3 SINE MIR 33 200 -8 273 286 62 0 chr17 66444047 66444159 -23060394 + MIR SINE MIR 20 138 -70 218 286 0 0 chr17 66446152 66446222 -23058331 + (CCG)n Simple_repeat Simple_repeat 1 70 0 202 209 55 11 chr17 66447612 66447703 -23056850 + (CGG)n Simple_repeat Simple_repeat 1 95 0 331 252 47 39 chr17 66451713 66451840 -23052713 + MIR3 SINE MIR 32 159 -49 310 297 15 0 chr17 66452394 66452492 -23052061 - MIR SINE MIR -62 146 64 197 304 108 29 chr17 66452923 66453025 -23051528 - MIR SINE MIR -29 233 124 269 270 60 30 chr17 66453309 66453409 -23051144 - MER81 DNA DNA -10 104 2 228 237 17 0 chr17 66453691 66453750 -23050803 + (TG)n Simple_repeat Simple_repeat 1 60 0 275 244 157 17 chr17 66455284 66455399 -23049154 + MIR SINE MIR 13 143 -119 183 298 53 0 chr17 66455809 66455866 -23048687 - MIR3 SINE MIR -38 170 111 2383 89 0 0 chr17 66456304 66456596 -23047957 + AluSq SINE Alu 1 292 -21 322 192 26 13 chr17 66456603 66456681 -23047872 - L1MB7 LINE L1 -40 6144 6066 2318 149 10 71 chr17 66456682 66457172 -23047381 - L1MB7 LINE L1 -191 5993 5534 464 284 146 31 chr17 66457224 66457478 -23047075 + L2 LINE L2 3031 3313 0 537 259 90 65 chr17 66458029 66458396 -23046157 - MLT1K LTR MaLR -2 586 211 1850 160 0 33 chr17 66458527 66458833 -23045720 - AluJb SINE Alu -16 296 1 808 314 77 23 chr17 66458871 66459314 -23045239 - MLT1K LTR MaLR 0 588 122 2353 178 21 11 chr17 66459721 66460349 -23044204 + L1MB4 LINE L1 4853 5485 -689 527 235 0 29 chr17 66460352 66460488 -23044065 + FLAM_A SINE Alu 1 132 -1 224 230 0 27 chr17 66460494 66460568 -23043985 + GA-rich Low_complexity Low_complexity 3 74 0 1725 181 14 0 chr17 66460617 66460899 -23043654 - AluJo SINE Alu -21 291 6 3224 170 4 54 chr17 66460907 66461614 -23042939 + L1MB4 LINE L1 5508 6179 -1 1905 139 51 0 chr17 66461620 66461914 -23042639 + AluSx SINE Alu 1 309 -3 611 96 0 193 chr17 66461946 66462112 -23042441 + L1MC1 LINE L1 6184 6317 -16 1063 164 62 10 chr17 66463355 66463563 -23040990 + MER20 DNA MER1_type 1 219 0 1730 179 20 3 chr17 66464418 66464714 -23039839 + AluJo SINE Alu 1 301 -11 213 39 0 0 chr17 66464741 66464767 -23039786 + (TG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr17 66464767 66464789 -23039764 + AT_rich Low_complexity Low_complexity 1 22 0 674 107 134 60 chr17 66464789 66464938 -23039615 - AluSg/x SINE Alu 0 310 151 283 291 12 12 chr17 66465007 66465093 -23039460 + MIR SINE MIR 71 156 -106 756 198 36 30 chr17 66465124 66465291 -23039262 - AluJo SINE Alu -105 207 40 799 140 28 28 chr17 66465292 66465470 -23039083 + L1MC3 LINE L1 6920 7097 -688 305 289 11 0 chr17 66465470 66465560 -23038993 + MLT1F1 LTR MaLR 35 125 -442 2424 180 94 24 chr17 66465563 66465983 -23038570 + L1MC3 LINE L1 7195 7665 -120 1926 112 101 20 chr17 66465983 66466330 -23038223 + THE1C LTR MaLR 1 375 0 2424 180 94 24 chr17 66466330 66466460 -23038093 + L1MC3 LINE L1 7665 7784 -1 363 194 119 60 chr17 66466730 66466864 -23037689 - L1ME4a LINE L1 -269 5852 5711 25 31 0 0 chr17 66467033 66467065 -23037488 + AT_rich Low_complexity Low_complexity 1 32 0 4250 160 15 16 chr17 66467260 66467764 -23036789 - L1MA9 LINE L1 -38 6274 5770 2305 118 3 6 chr17 66467764 66468077 -23036476 - AluSx SINE Alu 0 312 1 4250 160 15 16 chr17 66468077 66468364 -23036189 - L1MA9 LINE L1 -542 5770 5484 2413 103 41 8 chr17 66468368 66468396 -23036157 - Tigger4(Zombi) DNA MER2_type 0 2731 2705 2451 95 3 0 chr17 66468396 66468700 -23035853 - AluSg SINE Alu -5 305 1 2413 103 41 8 chr17 66468700 66469059 -23035494 - Tigger4(Zombi) DNA MER2_type -26 2705 2331 1788 150 3 46 chr17 66469059 66469365 -23035188 - AluJb SINE Alu -19 293 1 12476 124 16 41 chr17 66469365 66470365 -23034188 - Tigger4(Zombi) DNA MER2_type -692 2039 1016 1932 109 43 36 chr17 66470365 66470668 -23033885 - AluSx SINE Alu -7 305 1 12476 124 16 41 chr17 66470668 66471065 -23033488 - Tigger4(Zombi) DNA MER2_type -1715 1016 611 1715 188 13 19 chr17 66471065 66471240 -23033313 - AluJb SINE Alu 0 312 138 2190 139 0 0 chr17 66471240 66471550 -23033003 - AluSx SINE Alu -2 310 1 1715 188 13 19 chr17 66471550 66471688 -23032865 - AluJb SINE Alu -174 138 1 12476 124 16 41 chr17 66471688 66472380 -23032173 - Tigger4(Zombi) DNA MER2_type -2120 611 1 6589 167 22 29 chr17 66472380 66474172 -23030381 - L1M2 LINE L1 -749 5461 3801 1828 251 62 39 chr17 66474176 66475406 -23029147 - L1M2 LINE L1 -3542 2668 1405 3851 222 118 52 chr17 66475421 66476662 -23027891 - L1M2 LINE L1 -4632 1509 186 1121 163 0 0 chr17 66476662 66476834 -23027719 - AluSq SINE Alu -8 305 134 2374 78 7 3 chr17 66476834 66477127 -23027426 - AluSx SINE Alu -11 301 8 438 277 38 38 chr17 66477168 66477352 -23027201 - L1M2 LINE L1 -5957 184 1 387 235 152 8 chr17 66477515 66477647 -23026906 - MIR SINE MIR -29 233 83 400 254 0 74 chr17 66477830 66477952 -23026601 + MIR SINE MIR 69 181 -81 326 334 179 3 chr17 66478567 66478896 -23025657 + L2 LINE L2 1868 2254 -1060 2208 122 0 0 chr17 66479711 66479997 -23024556 + AluSx SINE Alu 1 286 -26 563 39 13 0 chr17 66479997 66480075 -23024478 + (CATAA)n Simple_repeat Simple_repeat 2 80 0 180 0 0 0 chr17 66480080 66480100 -23024453 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 448 317 77 82 chr17 66480239 66480618 -23023935 + L2 LINE L2 2877 3253 -19 429 351 64 26 chr17 66480776 66481041 -23023512 + L3b LINE CR1 1276 1550 -33 187 267 67 0 chr17 66482516 66482576 -23021977 + L3b LINE CR1 1323 1386 -197 728 130 0 69 chr17 66483384 66483395 -23021158 - FLAM_C SINE Alu -184 128 118 2125 140 3 0 chr17 66483395 66483702 -23020851 - AluSx SINE Alu -2 310 3 728 130 0 69 chr17 66483702 66483821 -23020732 - FLAM_C SINE Alu -194 118 7 191 215 308 9 chr17 66484251 66484358 -23020195 - MIR SINE MIR -1 261 123 805 246 73 17 chr17 66484391 66484623 -23019930 + MIR SINE MIR 18 262 0 277 268 21 21 chr17 66484631 66484728 -23019825 - MIR SINE MIR -47 215 119 643 101 67 42 chr17 66485889 66486008 -23018545 + FRAM SINE Alu 47 168 -8 430 287 134 58 chr17 66486047 66486415 -23018138 - MLT1J LTR MaLR -18 597 110 533 119 12 0 chr17 66486456 66486540 -23018013 - FRAM/FAM SINE Alu -92 84 1 297 236 14 14 chr17 66486542 66486614 -23017939 - MER5B DNA MER1_type -66 112 41 2135 137 0 10 chr17 66487095 66487408 -23017145 - AluSx SINE Alu -2 310 1 369 237 191 0 chr17 66487731 66487862 -23016691 - MIR SINE MIR -60 202 47 663 225 30 18 chr17 66488052 66488221 -23016332 - MER104 DNA Tc2 -5 175 5 280 294 201 39 chr17 66496604 66496808 -23007745 + MIR SINE MIR 18 254 -8 237 275 88 13 chr17 66497182 66497332 -23007221 + MIR SINE MIR 1 164 -83 671 245 19 42 chr17 66499627 66499843 -23004710 - L1ME3A LINE L1 0 6170 5960 199 145 12 48 chr17 66500529 66500612 -23003941 + GA-rich Low_complexity Low_complexity 6 85 0 570 211 82 35 chr17 66503020 66503191 -23001362 - MIR SINE MIR -76 186 8 205 231 176 19 chr17 66503625 66503733 -23000820 - MIR3 SINE MIR -3 205 81 1645 171 27 14 chr17 66504920 66505213 -22999340 + AluJo SINE Alu 3 299 -13 515 289 108 16 chr17 66505866 66506060 -22998493 + MIR SINE MIR 50 261 -1 219 337 23 0 chr17 66509244 66509330 -22995223 + L2 LINE L2 2956 3043 -229 1499 250 142 36 chr17 66509545 66509765 -22994788 - L1MC4a LINE L1 -1776 6032 5837 2110 112 3 56 chr17 66509765 66510087 -22994466 - AluSq SINE Alu -8 305 1 1499 250 142 36 chr17 66510087 66510563 -22993990 - L1MC4a LINE L1 -1971 5837 5262 273 288 44 25 chr17 66510742 66510902 -22993651 - L1MC4a LINE L1 -1098 5048 4886 238 279 68 7 chr17 66511025 66511172 -22993381 - L1MC4a LINE L1 -1438 4708 4553 601 282 49 41 chr17 66511668 66511913 -22992640 + MIR SINE MIR 16 262 0 488 287 0 30 chr17 66512398 66512565 -22991988 + MIR3 SINE MIR 41 202 -6 253 320 19 10 chr17 66512964 66513067 -22991486 - MIR3 SINE MIR -14 194 91 205 275 240 31 chr17 66513458 66513716 -22990837 - L2 LINE L2 -567 2747 2436 248 270 230 0 chr17 66513974 66514100 -22990453 - MIR3 SINE MIR -24 184 30 187 294 167 54 chr17 66514231 66514435 -22990118 - L2 LINE L2 -127 3145 2919 2317 125 0 0 chr17 66515703 66516016 -22988537 + AluSq SINE Alu 1 313 0 390 214 20 20 chr17 66516205 66516303 -22988250 - MIR SINE MIR -97 165 68 180 336 88 22 chr17 66517442 66517579 -22986974 - L2 LINE L2 -568 2746 2601 213 135 39 39 chr17 66517828 66517880 -22986673 - MIR SINE MIR -97 165 114 1553 176 103 0 chr17 66519183 66519485 -22985068 + MER58B DNA MER1_type 1 333 -8 2296 126 0 0 chr17 66519801 66520111 -22984442 - AluSx SINE Alu -2 310 1 360 0 0 0 chr17 66521658 66521698 -22982855 + (TG)n Simple_repeat Simple_repeat 2 41 0 217 93 47 0 chr17 66522774 66522817 -22981736 + (TA)n Simple_repeat Simple_repeat 2 46 0 267 54 0 0 chr17 66522980 66523017 -22981536 + (TA)n Simple_repeat Simple_repeat 1 37 0 633 251 274 19 chr17 66526567 66526997 -22977556 + L1ME4a LINE L1 5381 5920 -201 262 206 29 15 chr17 66527212 66527280 -22977273 + (TATG)n Simple_repeat Simple_repeat 2 70 0 24 32 0 0 chr17 66527379 66527410 -22977143 + AT_rich Low_complexity Low_complexity 1 31 0 322 349 139 6 chr17 66527537 66528027 -22976526 + L2 LINE L2 2014 2568 -746 405 0 0 0 chr17 66529255 66529300 -22975253 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1974 112 0 22 chr17 66529312 66529588 -22974965 - AluSx SINE Alu -39 273 4 1752 137 4 0 chr17 66529668 66529917 -22974636 + AluSx SINE Alu 47 296 -16 407 237 86 117 chr17 66530051 66530308 -22974245 + MIR SINE MIR 8 256 -6 487 269 69 33 chr17 66530462 66530687 -22973866 - MIR SINE MIR -37 225 4 2151 131 0 0 chr17 66531996 66532293 -22972260 - AluSx SINE Alu -15 297 1 255 327 37 19 chr17 66532522 66532629 -22971924 + MIR SINE MIR 101 209 -53 252 312 34 2 chr17 66533085 66533182 -22971371 + MIR SINE MIR 57 147 -61 212 200 20 20 chr17 66534010 66534060 -22970493 + CT-rich Low_complexity Low_complexity 1 50 0 234 256 52 126 chr17 66535744 66535896 -22968657 + MIR SINE MIR 49 180 -82 2526 93 0 0 chr17 66535896 66536206 -22968347 + AluSx SINE Alu 1 310 -2 234 256 52 126 chr17 66536206 66536283 -22968270 + MIR SINE MIR 180 261 -1 260 231 50 110 chr17 66536969 66537268 -22967285 - L1MEd LINE L1 -5173 946 666 292 263 237 0 chr17 66537277 66537395 -22967158 - L1MEd LINE L1 -5488 631 486 2069 134 6 13 chr17 66537426 66537739 -22966814 - AluSx SINE Alu -1 311 1 2753 248 79 27 chr17 66537844 66539218 -22965335 + L1ME3A LINE L1 4698 6160 -10 1702 194 3 10 chr17 66539256 66539560 -22964993 + AluJo SINE Alu 3 304 -8 549 274 13 7 chr17 66539675 66539828 -22964725 - L1MEd LINE L1 -5963 156 3 402 179 13 0 chr17 66539831 66539909 -22964644 + L1M3 LINE L1 5382 5460 -708 6420 126 62 21 chr17 66540863 66541306 -22963247 - Tigger3b DNA MER2_type -1798 1230 807 2073 137 0 0 chr17 66541306 66541599 -22962954 - AluJb SINE Alu -19 293 1 6420 126 62 21 chr17 66541599 66542318 -22962235 - Tigger3b DNA MER2_type -2221 807 20 314 280 94 69 chr17 66542365 66542640 -22961913 - L1MDb LINE L1 -5060 1349 1068 333 335 84 9 chr17 66542694 66542804 -22961749 + L2 LINE L2 2260 2360 -954 261 0 0 0 chr17 66542804 66542833 -22961720 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 333 335 84 9 chr17 66542833 66542937 -22961616 + L2 LINE L2 2360 2490 -824 3024 6 0 0 chr17 66543382 66543700 -22960853 + AluYb8 SINE Alu 1 318 0 1012 62 21 0 chr17 66543738 66543882 -22960671 + (TTTC)n Simple_repeat Simple_repeat 4 150 0 1026 166 0 0 chr17 66544415 66544578 -22959975 + FRAM SINE Alu 1 163 -3 208 193 35 0 chr17 66545164 66545221 -22959332 + (TG)n Simple_repeat Simple_repeat 1 59 0 252 273 164 8 chr17 66545630 66545758 -22958795 - MIR SINE MIR -10 252 105 1065 253 108 62 chr17 66546168 66546325 -22958228 + L1ME3A LINE L1 5159 5307 -863 868 209 12 0 chr17 66546325 66546488 -22958065 + FAM SINE Alu 4 168 -7 1065 253 108 62 chr17 66546488 66546512 -22958041 + L1ME3A LINE L1 5307 5328 -842 1966 106 78 36 chr17 66546512 66546872 -22957681 - THE1C LTR MaLR 0 375 1 1065 253 108 62 chr17 66546872 66547384 -22957169 + L1ME3A LINE L1 5328 5912 -258 2235 101 3 13 chr17 66547384 66547690 -22956863 - AluSx SINE Alu -9 303 1 1065 253 108 62 chr17 66547690 66547718 -22956835 + L1ME3A LINE L1 5912 5937 -233 188 264 79 107 chr17 66549000 66549178 -22955375 - MIR SINE MIR -57 205 33 280 193 10 66 chr17 66550187 66550276 -22954277 + MIR SINE MIR 18 110 -152 2028 127 0 28 chr17 66550276 66550618 -22953935 + AluSx SINE Alu 1 334 0 280 193 10 66 chr17 66550618 66550636 -22953917 + MIR SINE MIR 110 209 -53 448 266 133 23 chr17 66550803 66550976 -22953577 - MIR SINE MIR -51 211 20 2178 124 0 13 chr17 66551054 66551360 -22953193 + AluSx SINE Alu 1 302 -10 2267 105 0 29 chr17 66551521 66551835 -22952718 - AluSq SINE Alu -8 305 1 2351 51 20 3 chr17 66552039 66552332 -22952221 + AluY SINE Alu 1 298 -13 213 250 0 0 chr17 66552504 66552552 -22952001 + A-rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr17 66552994 66553017 -22951536 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr17 66553044 66553072 -22951481 + AT_rich Low_complexity Low_complexity 1 28 0 2185 84 3 40 chr17 66553125 66553448 -22951105 + AluSx SINE Alu 1 311 -1 2369 107 0 0 chr17 66553708 66554017 -22950536 - AluSx SINE Alu -3 309 1 721 329 46 4 chr17 66554238 66554475 -22950078 - MIR SINE MIR -14 248 2 2037 144 0 22 chr17 66554747 66555066 -22949487 + AluJb SINE Alu 1 312 0 203 229 0 0 chr17 66555149 66555184 -22949369 - L2 LINE L2 -27 3245 3211 589 272 43 11 chr17 66555301 66555485 -22949068 - MIR SINE MIR -71 191 2 263 305 67 38 chr17 66557123 66557228 -22947325 + L2 LINE L2 3155 3262 -10 3215 169 94 39 chr17 66557640 66558458 -22946095 - L1MB8 LINE L1 -1 6177 5296 2368 89 0 19 chr17 66558458 66558771 -22945782 - AluSg SINE Alu -3 307 1 3215 169 94 39 chr17 66558771 66558867 -22945686 - L1MB8 LINE L1 -882 5296 5207 1840 203 74 23 chr17 66559063 66559494 -22945059 - L1MB8 LINE L1 -1368 4778 4310 1714 166 35 3 chr17 66559494 66559777 -22944776 + AluSx SINE Alu 1 292 -20 1840 203 74 23 chr17 66559777 66559912 -22944641 - L1MB8 LINE L1 -1836 4310 4183 * 2549 211 51 44 chr17 66559906 66560573 -22943980 - L1MB8 LINE L1 -2527 3619 2943 2061 90 45 55 chr17 66560573 66560883 -22943670 - AluSg SINE Alu -3 307 1 2549 211 51 44 chr17 66560883 66561116 -22943437 - L1MB8 LINE L1 -3203 2943 2713 407 302 8 32 chr17 66561215 66561341 -22943212 + MIR3 SINE MIR 49 171 -37 * 419 259 143 60 chr17 66561330 66561371 -22943182 + MIR SINE MIR 29 65 -197 2204 91 7 26 chr17 66561371 66561678 -22942875 + AluSx SINE Alu 1 301 -11 419 259 143 60 chr17 66561678 66561852 -22942701 + MIR SINE MIR 65 262 0 2775 147 43 6 chr17 66562415 66562884 -22941669 + MER66B LTR ERV1 1 486 0 194 255 0 20 chr17 66564408 66564459 -22940094 - MIR3 SINE MIR -5 203 154 204 253 74 63 chr17 66564708 66564803 -22939750 - MIR3 SINE MIR -10 198 103 627 167 260 0 chr17 66564804 66564954 -22939599 - MER53 DNA DNA 0 189 1 4712 174 68 85 chr17 66565229 66565614 -22938939 - Charlie1a DNA MER1_type -1308 1453 1063 2123 119 26 26 chr17 66565614 66565924 -22938629 + AluSg SINE Alu 1 310 0 4712 174 68 85 chr17 66565924 66566749 -22937804 - Charlie1a DNA MER1_type -1698 1063 269 1865 107 55 24 chr17 66566749 66567039 -22937514 - AluSg SINE Alu -11 299 1 4712 174 68 85 chr17 66567039 66567304 -22937249 - Charlie1a DNA MER1_type -2492 269 1 186 325 0 0 chr17 66567675 66567715 -22936838 - L2 LINE L2 -23 3290 3251 1842 142 0 36 chr17 66568251 66568418 -22936135 - AluJb SINE Alu -19 293 140 2617 62 0 0 chr17 66568418 66568726 -22935827 - AluY SINE Alu -3 308 1 1842 142 0 36 chr17 66568726 66568861 -22935692 - AluJb SINE Alu -172 140 2 521 311 66 13 chr17 66568912 66569654 -22934899 + L1ME4a LINE L1 5100 5884 -286 649 299 49 0 chr17 66571737 66571941 -22932612 - MIR SINE MIR 0 262 49 650 278 67 35 chr17 66573236 66573607 -22930946 + L1ME LINE L1 5391 5773 -348 2546 63 0 0 chr17 66573802 66574103 -22930450 - AluY SINE Alu -10 301 1 2035 101 27 24 chr17 66574105 66574427 -22930126 - AluSx SINE Alu 0 312 1 1237 176 14 108 chr17 66574498 66574850 -22929703 - MER47B DNA MER2_type -99 319 1 417 162 120 17 chr17 66574850 66574967 -22929586 + L1ME4a LINE L1 5985 6113 -8 347 269 8 17 chr17 66575278 66575397 -22929156 - L1MC/D LINE L1 -2058 5750 5633 1619 174 10 3 chr17 66575450 66575761 -22928792 - L1MC1 LINE L1 -113 6220 5908 2037 142 3 23 chr17 66575767 66576119 -22928434 + Tigger1 DNA MER2_type 24 368 -2050 * 3878 108 40 37 chr17 66576117 66576182 -22928371 + Tigger1 DNA MER2_type 581 644 -1774 2081 72 0 33 chr17 66576182 66576458 -22928095 + AluSx SINE Alu 40 306 -6 3878 108 40 37 chr17 66576458 66576923 -22927630 + Tigger1 DNA MER2_type 644 1116 -1302 2336 83 10 0 chr17 66576923 66577223 -22927330 - AluSx SINE Alu -9 303 1 3878 108 40 37 chr17 66577223 66577367 -22927186 + Tigger1 DNA MER2_type 1116 1258 -1160 2225 96 14 0 chr17 66577367 66577660 -22926893 - AluSq SINE Alu -15 298 2 5761 149 26 18 chr17 66577665 66579423 -22925130 - L1PA16 LINE L1 0 6166 4392 315 71 0 0 chr17 66579423 66579465 -22925088 + (TG)n Simple_repeat Simple_repeat 2 43 0 5761 149 26 18 chr17 66579465 66579533 -22925020 - L1PA16 LINE L1 -1774 4392 4326 2481 129 21 2 chr17 66579540 66579960 -22924593 + Tigger1 DNA MER2_type 1238 1665 -753 1354 147 4 40 chr17 66579953 66580001 -22924552 + Tigger1 DNA MER2_type 2176 2224 -194 * 1678 131 106 11 chr17 66580001 66580275 -22924278 - AluSx SINE Alu -12 300 1 1354 147 4 40 chr17 66580275 66580477 -22924076 + Tigger1 DNA MER2_type 2224 2417 -1 8360 203 56 22 chr17 66580477 66581063 -22923490 - L1MC1 LINE L1 -423 5910 5345 2249 125 0 0 chr17 66581063 66581360 -22923193 + AluSq SINE Alu 1 297 -16 8360 203 56 22 chr17 66581360 66581582 -22922971 - L1MC1 LINE L1 -988 5345 5132 2295 71 0 0 chr17 66581582 66581876 -22922677 - AluY SINE Alu -17 294 1 1521 145 0 56 chr17 66581878 66582147 -22922406 - AluJb SINE Alu -16 296 43 8360 203 56 22 chr17 66582147 66584376 -22920177 - L1MC1 LINE L1 -1201 5132 2759 772 251 47 19 chr17 66584375 66584737 -22919816 - L1M4 LINE L1 -1375 4771 4400 * 378 264 158 53 chr17 66584855 66585324 -22919229 - L1M4 LINE L1 -1932 4214 3697 568 298 81 39 chr17 66585605 66586696 -22917857 - L1M4 LINE L1 -2863 3283 2147 207 307 0 0 chr17 66586738 66586826 -22917727 + T-rich Low_complexity Low_complexity 1 88 0 423 361 30 34 chr17 66587160 66587426 -22917127 - HAL1 LINE L1 -792 1715 1451 317 192 133 42 chr17 66587440 66587560 -22916993 - HAL1 LINE L1 -1143 1364 1234 310 239 0 0 chr17 66587803 66587874 -22916679 - L2 LINE L2 -1 3312 3242 1041 169 10 15 chr17 66587910 66588111 -22916442 - MER20 DNA MER1_type 0 219 20 342 356 76 70 chr17 66588119 66588870 -22915683 - L2 LINE L2 -85 3187 2414 271 167 42 21 chr17 66589698 66589794 -22914759 + CT-rich Low_complexity Low_complexity 2 99 0 2408 92 0 3 chr17 66589819 66590125 -22914428 - AluSc SINE Alu -4 305 1 2194 94 11 0 chr17 66590125 66590412 -22914141 - AluSc SINE Alu -3 306 17 2372 66 10 7 chr17 66590508 66590811 -22913742 - AluY SINE Alu -7 304 1 360 288 110 52 chr17 66590926 66591117 -22913436 + MIR SINE MIR 45 246 -16 2367 100 0 3 chr17 66591694 66592004 -22912549 + AluSx SINE Alu 1 309 -3 246 32 0 0 chr17 66592553 66592584 -22911969 + (TG)n Simple_repeat Simple_repeat 2 32 0 243 0 0 0 chr17 66592610 66592637 -22911916 + (TG)n Simple_repeat Simple_repeat 2 28 0 1893 141 0 11 chr17 66592637 66592920 -22911633 - AluSx SINE Alu -28 284 5 21 0 0 0 chr17 66593939 66593960 -22910593 + AT_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr17 66594304 66594346 -22910207 + AT_rich Low_complexity Low_complexity 1 42 0 429 143 0 0 chr17 66595495 66595558 -22908995 + Alu SINE Alu 231 293 -18 2124 124 0 13 chr17 66595560 66595867 -22908686 + AluSx SINE Alu 1 303 -9 407 285 60 26 chr17 66596034 66596185 -22908368 + MIR3 SINE MIR 45 200 -8 2683 33 0 0 chr17 66596684 66596988 -22907565 + AluY SINE Alu 1 304 -7 366 232 0 12 chr17 66597059 66597141 -22907412 + MIR3 SINE MIR 120 200 -8 1912 155 0 7 chr17 66597274 66597570 -22906983 - AluJb SINE Alu -18 294 1 2000 132 0 25 chr17 66597991 66598310 -22906243 - AluJb SINE Alu 0 312 2 220 371 48 19 chr17 66598518 66598623 -22905930 - L2 LINE L2 -212 3060 2953 2420 66 0 0 chr17 66598748 66599050 -22905503 + AluY SINE Alu 1 302 -9 276 30 0 0 chr17 66600487 66600520 -22904033 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1596 190 7 3 chr17 66600558 66600842 -22903711 - AluJo SINE Alu -27 285 1 2216 92 0 0 chr17 66600947 66601255 -22903298 - AluSg SINE Alu 0 308 1 2073 136 64 141 chr17 66601298 66601988 -22902565 - L1MC2 LINE L1 -39 6305 5669 193 269 109 67 chr17 66601992 66602060 -22902493 - MIR SINE MIR -77 185 108 2301 104 3 19 chr17 66602060 66602376 -22902177 + AluSx SINE Alu 1 311 -1 193 269 109 67 chr17 66602376 66602426 -22902127 - MIR SINE MIR -154 108 62 2326 72 0 7 chr17 66602579 66602870 -22901683 - AluSq SINE Alu -22 291 3 373 309 73 77 chr17 66602898 66603359 -22901194 - L2 LINE L2 -233 3039 2556 2477 94 0 0 chr17 66603459 66603798 -22900755 + L1PA8 LINE L1 5829 6167 -5 259 271 93 9 chr17 66603969 66604076 -22900477 + L2 LINE L2 3197 3312 -1 6905 27 0 0 chr17 66604096 66604901 -22899652 + L1PA4 LINE L1 5348 6152 -3 1704 151 3 14 chr17 66606291 66606575 -22897978 - AluJo SINE Alu -31 281 1 1943 153 0 0 chr17 66607660 66607961 -22896592 - AluJb SINE Alu 0 301 1 28 91 0 0 chr17 66607961 66608038 -22896515 + AT_rich Low_complexity Low_complexity 1 77 0 2351 169 69 13 chr17 66608102 66608659 -22895894 - L1M4 LINE L1 -406 5768 5188 1278 155 0 57 chr17 66608662 66608988 -22895565 - AluJb SINE Alu 0 348 1 1871 191 21 9 chr17 66608988 66609407 -22895146 - L1M4 LINE L1 -946 5200 4777 311 329 96 70 chr17 66609725 66610126 -22894427 - L2 LINE L2 -1 3271 2882 2301 105 3 0 chr17 66610126 66610431 -22894122 + AluSx SINE Alu 4 309 -3 311 329 96 70 chr17 66610431 66610631 -22893922 - L2 LINE L2 -390 2882 2626 1959 118 3 48 chr17 66610631 66610945 -22893608 - AluJb SINE Alu -12 300 1 311 329 96 70 chr17 66610945 66610989 -22893564 - L2 LINE L2 -646 2626 2585 305 309 60 0 chr17 66611137 66611221 -22893332 + MIR SINE MIR 20 108 -154 1465 158 0 4 chr17 66611249 66611477 -22893076 - AluSx SINE Alu -85 227 1 398 307 58 97 chr17 66611793 66612135 -22892418 + L2 LINE L2 2943 3271 -1 517 290 115 6 chr17 66612285 66612468 -22892085 + MIR SINE MIR 41 243 -19 265 304 11 22 chr17 66614155 66614247 -22890306 - MIR SINE MIR -106 156 66 551 140 20 10 chr17 66615239 66615339 -22889214 + L1MB7 LINE L1 6071 6171 -13 2436 75 13 0 chr17 66615341 66615646 -22888907 - AluY SINE Alu -2 309 1 626 230 50 31 chr17 66616182 66616343 -22888210 - MIR3 SINE MIR -10 198 35 257 353 49 20 chr17 66616697 66616901 -22887652 + L1ME LINE L1 5512 5721 -400 28 0 0 0 chr17 66617206 66617234 -22887319 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 66619046 66619069 -22885484 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr17 66620587 66620618 -22883935 + AT_rich Low_complexity Low_complexity 1 31 0 299 308 0 0 chr17 66620670 66620748 -22883805 + L2 LINE L2 3234 3311 -2 21 0 0 0 chr17 66621153 66621174 -22883379 + AT_rich Low_complexity Low_complexity 1 21 0 995 127 0 33 chr17 66621797 66621947 -22882606 - AluJo SINE Alu -23 289 145 498 73 0 0 chr17 66621949 66622017 -22882536 - MSTB LTR MaLR -356 70 3 906 140 0 40 chr17 66622017 66622167 -22882386 - AluJo SINE Alu -168 144 1 484 327 53 7 chr17 66622402 66622552 -22882001 - MIR3 SINE MIR -35 173 17 2388 106 3 0 chr17 66623519 66623830 -22880723 + AluSp SINE Alu 1 312 -1 2112 149 0 0 chr17 66624674 66624982 -22879571 - AluJb SINE Alu -2 310 3 192 313 114 30 chr17 66626174 66626305 -22878248 + MIR3 SINE MIR 7 148 -60 1294 229 71 20 chr17 66626802 66627208 -22877345 + MARNA DNA Mariner 4 430 -156 205 175 25 0 chr17 66627310 66627350 -22877203 - L2 LINE L2 -4 3268 3228 980 337 169 15 chr17 66627362 66628460 -22876093 - L2 LINE L2 0 3272 1998 577 373 80 29 chr17 66630174 66630790 -22873763 - L2 LINE L2 -1434 1880 1234 2241 108 7 7 chr17 66631004 66631310 -22873243 + AluSg SINE Alu 1 306 -4 321 246 26 70 chr17 66631326 66631440 -22873113 + L1ME3A LINE L1 5962 6070 -100 1505 227 216 17 chr17 66631440 66631964 -22872589 - MLT2E LTR ERVL 0 628 1 196 283 0 19 chr17 66632162 66632215 -22872338 - L2 LINE L2 -203 3069 3018 569 255 117 0 chr17 66632223 66632411 -22872142 - MIR SINE MIR 0 262 53 1930 162 0 17 chr17 66632462 66632764 -22871789 - AluJb SINE Alu -15 297 1 247 372 103 14 chr17 66632835 66633058 -22871495 - L2 LINE L2 -352 2962 2720 1817 174 0 28 chr17 66633136 66633457 -22871096 - AluJb SINE Alu 0 312 1 464 235 54 71 chr17 66633504 66633676 -22870877 - MIR SINE MIR -74 188 16 32 75 0 0 chr17 66635456 66635523 -22869030 + AT_rich Low_complexity Low_complexity 1 67 0 197 105 105 26 chr17 66636534 66636572 -22867981 - MIR3 SINE MIR -42 166 126 278 232 12 49 chr17 66636650 66636732 -22867821 + MIR SINE MIR 184 262 0 564 147 0 0 chr17 66636737 66636832 -22867721 - FLAM_C SINE Alu -9 134 40 280 333 0 18 chr17 66636931 66637042 -22867511 + L2 LINE L2 3161 3269 -44 307 234 57 57 chr17 66638973 66639097 -22865456 + LTR67 LTR ERVL 428 551 -6 707 309 63 90 chr17 66639111 66639211 -22865342 + L2 LINE L2 2487 2588 -725 1851 132 73 10 chr17 66639211 66639379 -22865174 - AluJo SINE Alu -6 306 111 206 0 0 65 chr17 66639379 66639410 -22865143 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1851 132 73 10 chr17 66639410 66639529 -22865024 - AluJo SINE Alu -201 111 1 707 309 63 90 chr17 66639529 66639840 -22864713 + L2 LINE L2 2588 2906 -407 2427 88 0 0 chr17 66639840 66640147 -22864406 - AluSg SINE Alu -3 307 1 707 309 63 90 chr17 66640147 66640300 -22864253 + L2 LINE L2 2906 3062 -251 2215 124 3 0 chr17 66640300 66640599 -22863954 + AluSx SINE Alu 1 300 -12 707 309 63 90 chr17 66640599 66640878 -22863675 + L2 LINE L2 3062 3313 0 736 321 89 51 chr17 66640879 66641272 -22863281 + L2 LINE L2 2454 2861 -453 247 250 47 0 chr17 66641406 66641470 -22863083 + L2 LINE L2 3159 3225 -88 441 246 37 30 chr17 66641502 66641636 -22862917 - MER112 DNA MER1_type -11 249 115 348 161 0 0 chr17 66641638 66641700 -22862853 + (TG)n Simple_repeat Simple_repeat 1 62 0 2287 120 3 0 chr17 66641708 66642008 -22862545 - AluSx SINE Alu -11 301 1 1834 213 48 6 chr17 66642296 66642793 -22861760 + L1ME1 LINE L1 2416 2933 -3213 1479 259 71 2 chr17 66642794 66643370 -22861183 + L1ME1 LINE L1 2994 3609 -2537 * 3571 189 54 52 chr17 66643359 66643399 -22861154 + L1ME1 LINE L1 4665 4703 -1463 2183 4 0 0 chr17 66643399 66643634 -22860919 + AluYb8 SINE Alu 82 316 -2 3571 189 54 52 chr17 66643634 66643803 -22860750 + L1ME1 LINE L1 4703 4870 -1296 1463 163 0 9 chr17 66643803 66644030 -22860523 - AluJb SINE Alu -87 225 1 3571 189 54 52 chr17 66644030 66645310 -22859243 + L1ME1 LINE L1 4870 6156 -10 2296 97 3 0 chr17 66645310 66645599 -22858954 + AluSx SINE Alu 1 290 -22 24 67 0 0 chr17 66645599 66645644 -22858909 + AT_rich Low_complexity Low_complexity 1 45 0 2379 92 0 10 chr17 66645683 66645997 -22858556 + AluY SINE Alu 1 311 0 2137 86 0 7 chr17 66646145 66646424 -22858129 + AluSx SINE Alu 31 307 -5 603 308 48 57 chr17 66646440 66646613 -22857940 + L1ME LINE L1 5246 5419 -702 2280 96 0 25 chr17 66646613 66646927 -22857626 - AluSx SINE Alu -5 307 2 603 308 48 57 chr17 66646927 66647176 -22857377 + L1ME LINE L1 5419 5665 -456 259 240 0 13 chr17 66647177 66647252 -22857301 + L1ME LINE L1 5709 5782 -380 2076 86 38 14 chr17 66647466 66647757 -22856796 + AluSx SINE Alu 3 300 -12 2306 101 0 0 chr17 66647830 66648126 -22856427 + AluSq SINE Alu 1 296 -17 268 274 42 83 chr17 66650555 66650723 -22853830 + L2 LINE L2 3148 3308 -5 2075 133 0 3 chr17 66650766 66651066 -22853487 + AluSq SINE Alu 1 299 -14 266 230 0 23 chr17 66651256 66651343 -22853210 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 2106 128 0 6 chr17 66651478 66651790 -22852763 + AluSx SINE Alu 1 310 -2 339 25 0 0 chr17 66652662 66652702 -22851851 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1884 150 0 0 chr17 66652708 66652994 -22851559 - AluJb SINE Alu -26 286 1 32 0 0 0 chr17 66653000 66653032 -22851521 + AT_rich Low_complexity Low_complexity 1 32 0 389 118 0 0 chr17 66653032 66653083 -22851470 - MER66A LTR ERV1 -141 337 287 1854 261 95 48 chr17 66653329 66653523 -22851030 + MER21B LTR ERV1 1 184 -679 2533 34 3 0 chr17 66653523 66653816 -22850737 + AluY SINE Alu 1 294 -17 1854 261 95 48 chr17 66653816 66654327 -22850226 + MER21B LTR ERV1 184 739 -124 516 16 0 0 chr17 66656693 66656754 -22847799 + (TG)n Simple_repeat Simple_repeat 2 62 0 852 309 101 2 chr17 66657553 66657987 -22846566 + L1M4 LINE L1 1252 1728 -4656 * 1702 217 83 25 chr17 66657983 66658375 -22846178 - L1M4 LINE L1 -1801 4345 3918 2342 94 0 0 chr17 66658375 66658674 -22845879 - AluY SINE Alu -12 299 1 1702 217 83 25 chr17 66658674 66658764 -22845789 - L1M4 LINE L1 -2228 3918 3835 296 187 98 8 chr17 66658756 66658854 -22845699 - L1MC3 LINE L1 -1 7994 7680 * 668 226 39 6 chr17 66658880 66659061 -22845492 + L1M4 LINE L1 4692 4878 -1504 260 148 66 0 chr17 66659058 66659119 -22845434 - L1MC4a LINE L1 -80 7728 7664 * 953 178 80 36 chr17 66659123 66659348 -22845205 - L1MD2 LINE L1 -215 6538 6304 2475 191 8 42 chr17 66659348 66659844 -22844709 - MLT2B3 LTR ERVL -5 549 71 538 116 0 35 chr17 66659919 66660005 -22844548 - MLT2B3 LTR ERVL -469 85 3 3640 204 36 30 chr17 66660006 66661534 -22843019 - L1MD2 LINE L1 -451 6302 4764 * 5970 235 62 44 chr17 66661525 66662959 -22841594 - L1M4 LINE L1 -1482 4664 3258 1678 192 10 0 chr17 66662959 66663256 -22841297 - AluJb SINE Alu 0 312 13 5970 235 62 44 chr17 66663256 66663513 -22841040 - L1M4 LINE L1 -2888 3258 3007 290 26 26 0 chr17 66663513 66663552 -22841001 + (TA)n Simple_repeat Simple_repeat 2 41 0 5970 235 62 44 chr17 66663552 66663806 -22840747 - L1M4 LINE L1 -3139 3007 2759 2188 102 3 13 chr17 66663806 66664119 -22840434 + AluSq SINE Alu 4 313 0 5970 235 62 44 chr17 66664119 66664452 -22840101 - L1M4 LINE L1 -3387 2759 2342 1368 163 104 3 chr17 66664478 66664804 -22839749 - L1MD2 LINE L1 -4619 1921 1563 614 198 58 43 chr17 66664823 66665030 -22839523 - L1M4 LINE L1 -3293 2853 2644 * 662 187 108 47 chr17 66665016 66665230 -22839323 - L1MB8 LINE L1 0 6178 5952 4841 169 37 50 chr17 66665240 66666230 -22838323 - L1MB8 LINE L1 -15 6163 5162 2087 134 17 0 chr17 66666230 66666528 -22838025 - AluSx SINE Alu -9 303 1 4841 169 37 50 chr17 66666528 66666572 -22837981 - L1MB8 LINE L1 -1016 5162 5119 2092 105 35 38 chr17 66666572 66666689 -22837864 - AluSx SINE Alu 0 312 196 2170 119 0 0 chr17 66666689 66666984 -22837569 - AluSg1 SINE Alu -14 295 1 2092 105 35 38 chr17 66666984 66667179 -22837374 - AluSx SINE Alu -116 196 1 4841 169 37 50 chr17 66667179 66667479 -22837074 - L1MB8 LINE L1 -1059 5119 4857 1099 251 16 19 chr17 66667482 66667857 -22836696 - L1M4 LINE L1 -3483 2663 2290 3080 223 99 23 chr17 66667873 66668663 -22835890 + MER21B LTR ERV1 13 862 -1 10333 208 56 43 chr17 66668717 66670535 -22834018 - L1MA4 LINE L1 -6 6476 4683 1425 196 66 4 chr17 66670535 66670701 -22833852 - AluJo SINE Alu -14 298 107 206 81 27 0 chr17 66670701 66670738 -22833815 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1425 196 66 4 chr17 66670738 66670842 -22833711 - AluJo SINE Alu -205 107 11 10333 208 56 43 chr17 66670842 66674212 -22830341 - L1MA4 LINE L1 -1799 4683 627 2580 182 24 13 chr17 66674216 66674765 -22829788 - L1 LINE L1 -1188 4958 4404 386 306 113 8 chr17 66674790 66674914 -22829639 + L2 LINE L2 3136 3272 0 12805 142 18 18 chr17 66674918 66675466 -22829087 + L1MA3 LINE L1 2915 3461 -2844 2095 138 0 0 chr17 66675466 66675778 -22828775 + AluSx SINE Alu 1 312 0 12805 142 18 18 chr17 66675778 66678591 -22825962 + L1MA3 LINE L1 3461 6271 -34 2240 107 0 3 chr17 66678591 66678889 -22825664 + AluSx SINE Alu 1 297 -15 450 0 0 0 chr17 66678889 66678939 -22825614 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 12805 142 18 18 chr17 66678939 66678950 -22825603 + L1MA3 LINE L1 6270 6294 -11 2929 122 5 5 chr17 66679041 66679468 -22825085 + MSTA LTR MaLR 2 428 0 22 35 0 0 chr17 66679602 66679631 -22824922 + AT_rich Low_complexity Low_complexity 1 29 0 985 150 0 7 chr17 66680305 66680458 -22824095 + FRAM SINE Alu 1 152 -14 25 0 0 0 chr17 66680528 66680553 -22824000 + AT_rich Low_complexity Low_complexity 1 25 0 539 266 71 30 chr17 66681049 66681218 -22823335 + MIR SINE MIR 25 200 -62 204 214 0 0 chr17 66681331 66681387 -22823166 + (TA)n Simple_repeat Simple_repeat 2 57 0 195 321 0 0 chr17 66681426 66681479 -22823074 - MIR SINE MIR -124 138 86 2008 131 0 0 chr17 66681796 66682086 -22822467 + AluJb SINE Alu 9 298 -14 195 155 17 35 chr17 66682219 66682277 -22822276 + CT-rich Low_complexity Low_complexity 5 61 0 238 310 0 17 chr17 66682512 66682570 -22821983 - MIR SINE MIR -133 75 19 24 32 0 0 chr17 66682921 66682952 -22821601 + AT_rich Low_complexity Low_complexity 1 31 0 570 136 25 8 chr17 66683071 66683189 -22821364 + CT-rich Low_complexity Low_complexity 1 120 0 1980 113 3 3 chr17 66685422 66685729 -22818824 - AluSx SINE Alu 0 307 1 746 233 159 37 chr17 66685748 66685961 -22818592 - L1ME3A LINE L1 -6 6164 5896 2324 78 10 3 chr17 66685961 66686269 -22818284 - AluSg SINE Alu 0 310 1 746 233 159 37 chr17 66686269 66686381 -22818172 - L1ME3A LINE L1 -274 5896 5799 1594 246 85 2 chr17 66686658 66687081 -22817472 - L1ME3A LINE L1 -396 5774 5317 2411 111 17 3 chr17 66687190 66687551 -22817002 + MER47A DNA MER2_type 1 366 0 1937 206 42 59 chr17 66687630 66688169 -22816384 + L1MC5 LINE L1 6992 7522 -439 2178 124 0 10 chr17 66688169 66688475 -22816078 + AluSq SINE Alu 1 303 -10 1937 206 42 59 chr17 66688475 66688526 -22816027 + L1MC5 LINE L1 7522 7572 -389 777 316 38 60 chr17 66688572 66689104 -22815449 + L1ME LINE L1 12 531 -5539 1669 281 83 30 chr17 66689195 66690133 -22814420 + L1ME LINE L1 521 1508 -4753 6576 152 33 138 chr17 66690168 66691742 -22812811 + L1MCa LINE L1 46 1784 -4642 1721 146 4 4 chr17 66691742 66691996 -22812557 + AluSx SINE Alu 7 260 -52 6576 152 33 138 chr17 66691996 66692314 -22812239 + L1MCa LINE L1 1784 1824 -4602 2312 74 10 10 chr17 66692314 66692613 -22811940 + AluSx SINE Alu 1 299 -13 6576 152 33 138 chr17 66692613 66692650 -22811903 + L1MCa LINE L1 1824 1863 -4563 191 36 36 0 chr17 66692665 66692693 -22811860 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1342 184 32 85 chr17 66692707 66693023 -22811530 + MLT1B LTR MaLR 86 384 -6 1391 138 172 0 chr17 66693024 66693314 -22811239 + L1MCa LINE L1 1861 2200 -4226 2024 134 18 15 chr17 66693315 66693657 -22810896 + L1MC1 LINE L1 5991 6333 0 3213 173 141 183 chr17 66693658 66694062 -22810491 - L1M4 LINE L1 -1060 5584 5165 2261 87 7 0 chr17 66694062 66694377 -22810176 + AluSp SINE Alu 1 317 0 3213 173 141 183 chr17 66694377 66694639 -22809914 - L1M4 LINE L1 -1479 5165 4894 300 53 0 0 chr17 66694639 66694677 -22809876 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 3213 173 141 183 chr17 66694677 66694692 -22809861 - L1M4 LINE L1 -1750 4894 4880 741 181 15 0 chr17 66694692 66694825 -22809728 - FRAM SINE Alu -43 133 1 3213 173 141 183 chr17 66694825 66694868 -22809685 - L1M4 LINE L1 -1764 4880 4837 753 141 0 31 chr17 66694868 66694996 -22809557 - FLAM_C SINE Alu -19 124 1 3213 173 141 183 chr17 66694996 66695842 -22808711 - L1M4 LINE L1 -1807 4837 3827 735 255 42 14 chr17 66695918 66696294 -22808259 - L1M4 LINE L1 -3826 2818 2427 1045 151 27 0 chr17 66696301 66696487 -22808066 - L1MD1 LINE L1 -92 6150 5960 * 1286 274 80 54 chr17 66696484 66696717 -22807836 - L1M4 LINE L1 -5375 1167 942 351 0 0 0 chr17 66696717 66696756 -22807797 + (TG)n Simple_repeat Simple_repeat 2 40 0 1286 274 80 54 chr17 66696756 66697306 -22807247 - L1M4 LINE L1 -5600 942 363 835 267 30 53 chr17 66698426 66698688 -22805865 - MIR SINE MIR -5 257 2 225 264 111 0 chr17 66699710 66699782 -22804771 - MIR SINE MIR -65 197 118 11168 76 11 0 chr17 66702213 66703714 -22800839 - L1PA7 LINE L1 -1064 5082 3566 6894 47 25 11 chr17 66703714 66704050 -22800503 + L1PA7 LINE L1 5088 5418 -736 2283 103 7 0 chr17 66704050 66704352 -22800201 + AluY SINE Alu 1 304 -7 6894 47 25 11 chr17 66704352 66705067 -22799486 + L1PA7 LINE L1 5418 6151 -3 2181 111 7 0 chr17 66705325 66705614 -22798939 - AluSx SINE Alu -21 291 1 2083 99 0 28 chr17 66705915 66706199 -22798354 + AluSx SINE Alu 1 276 -36 214 257 184 18 chr17 66706248 66706357 -22798196 + L2 LINE L2 3164 3290 -23 218 327 99 58 chr17 66706459 66706604 -22797949 - L2 LINE L2 -214 3058 2920 1318 219 57 0 chr17 66706604 66706765 -22797788 - AluJo SINE Alu -17 295 110 294 29 0 0 chr17 66706765 66706800 -22797753 + (TG)n Simple_repeat Simple_repeat 2 36 0 1318 219 57 0 chr17 66706800 66706917 -22797636 - AluJo SINE Alu -202 110 1 218 327 99 58 chr17 66706917 66707054 -22797499 - L2 LINE L2 -352 2920 2765 265 325 2 40 chr17 66707290 66707389 -22797164 + MIR SINE MIR 17 102 -106 308 278 53 53 chr17 66707705 66707838 -22796715 + MIR SINE MIR 79 211 -51 1612 134 0 65 chr17 66708025 66708089 -22796464 + AluSx SINE Alu 1 68 -244 2135 84 84 0 chr17 66708089 66708373 -22796180 - AluSq SINE Alu -5 308 1 1612 134 0 65 chr17 66708373 66708584 -22795969 + AluSx SINE Alu 68 258 -54 459 73 0 0 chr17 66708587 66708655 -22795898 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 341 378 83 16 chr17 66708802 66708995 -22795558 + L2 LINE L2 3067 3272 0 220 309 60 77 chr17 66709023 66709191 -22795362 - L2 LINE L2 -93 3179 3015 204 235 0 118 chr17 66709566 66709634 -22794919 - L2 LINE L2 -58 3255 3196 2081 120 7 13 chr17 66709783 66710082 -22794471 - AluSx SINE Alu -15 297 1 210 288 8 76 chr17 66710248 66710380 -22794173 - MIR SINE MIR -50 212 90 415 186 93 0 chr17 66710478 66710564 -22793989 - MIR SINE MIR -110 152 59 644 155 7 108 chr17 66710663 66710811 -22793742 - FLAM_A SINE Alu 0 133 1 25002 97 21 11 chr17 66711096 66714750 -22789803 + L1PA6 LINE L1 3 3694 -2452 7168 50 10 0 chr17 66714769 66716015 -22788538 + L1PA6 LINE L1 4896 6150 -4 21 0 0 0 chr17 66716015 66716036 -22788517 + AT_rich Low_complexity Low_complexity 1 21 0 244 220 0 17 chr17 66717771 66717830 -22786723 - MIR SINE MIR -25 237 180 396 313 114 47 chr17 66717929 66718105 -22786448 - MARNA DNA Mariner -97 489 326 1961 128 7 29 chr17 66718105 66718411 -22786142 + AluSx SINE Alu 1 299 -13 396 313 114 47 chr17 66718411 66718521 -22786032 - MARNA DNA Mariner -260 326 225 2711 26 0 0 chr17 66718521 66718823 -22785730 - AluY SINE Alu -9 302 1 396 313 114 47 chr17 66718823 66718896 -22785657 - MARNA DNA Mariner -361 225 105 2337 112 50 3 chr17 66718917 66719275 -22785278 - THE1C LTR MaLR 0 375 1 509 330 37 11 chr17 66719401 66719592 -22784961 - MIR3 SINE MIR -11 197 2 2079 113 3 3 chr17 66720895 66721186 -22783367 + AluSg SINE Alu 1 291 -19 431 335 41 3 chr17 66722551 66722707 -22781846 - MIR3 SINE MIR -46 162 2 1717 123 4 8 chr17 66722802 66723053 -22781500 - AluSq SINE Alu -17 296 47 889 199 17 85 chr17 66723097 66723333 -22781220 - MER58A DNA MER1_type 0 224 5 25 31 0 0 chr17 66723344 66723376 -22781177 + AT_rich Low_complexity Low_complexity 1 32 0 316 244 15 107 chr17 66723613 66723744 -22780809 - MIR SINE MIR -143 119 1 27 29 0 0 chr17 66724758 66724792 -22779761 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr17 66725017 66725045 -22779508 + AT_rich Low_complexity Low_complexity 1 28 0 920 200 6 0 chr17 66725138 66725308 -22779245 + FRAM SINE Alu 1 171 -5 23 33 0 0 chr17 66725643 66725673 -22778880 + AT_rich Low_complexity Low_complexity 1 30 0 2148 232 87 120 chr17 66725798 66726236 -22778317 + L1MB1 LINE L1 156 607 -5365 1849 159 3 23 chr17 66726236 66726538 -22778015 + AluJb SINE Alu 1 296 -16 2148 232 87 120 chr17 66726538 66727101 -22777452 + L1MB1 LINE L1 607 1187 -4785 1963 100 8 0 chr17 66727101 66727360 -22777193 - AluSx SINE Alu -23 289 29 2148 232 87 120 chr17 66727360 66727773 -22776780 + L1MB1 LINE L1 1187 1251 -4721 1765 170 21 3 chr17 66727773 66728062 -22776491 + AluJb SINE Alu 1 294 -18 2148 232 87 120 chr17 66728062 66728644 -22775909 + L1MB1 LINE L1 1251 1851 -4121 2930 172 102 56 chr17 66728647 66728983 -22775570 + L1MB1 LINE L1 3870 4189 -1781 2461 48 0 7 chr17 66728983 66729293 -22775260 + L1PA5 LINE L1 5847 6154 0 2930 172 102 56 chr17 66729293 66729511 -22775042 + L1MB1 LINE L1 4189 4396 -1574 2277 98 0 0 chr17 66729511 66729798 -22774755 - AluSg SINE Alu -23 287 1 2930 172 102 56 chr17 66729798 66730025 -22774528 + L1MB1 LINE L1 4396 4688 -1282 740 180 0 0 chr17 66730041 66730169 -22774384 + MSTB1 LTR MaLR 1 128 -298 * 775 175 8 0 chr17 66730164 66730290 -22774263 + MSTB1 LTR MaLR 275 401 -31 4423 161 31 38 chr17 66730290 66731426 -22773127 + L1MB1 LINE L1 4904 5992 0 765 208 99 14 chr17 66731888 66732109 -22772444 - L1M4 LINE L1 -2160 3986 3747 23 54 0 0 chr17 66732121 66732158 -22772395 + AT_rich Low_complexity Low_complexity 1 37 0 10098 209 72 50 chr17 66732161 66734624 -22769929 - L1MB7 LINE L1 -54 6628 4222 940 113 0 0 chr17 66734624 66734748 -22769805 + AluSg/x SINE Alu 178 301 -11 2429 77 0 3 chr17 66734748 66735048 -22769505 + AluY SINE Alu 1 299 -12 10098 209 72 50 chr17 66735048 66735118 -22769435 - L1MB7 LINE L1 -2460 4222 4155 2122 102 58 0 chr17 66735118 66735411 -22769142 + AluSg SINE Alu 1 310 0 10098 209 72 50 chr17 66735411 66735857 -22768696 - L1MB7 LINE L1 -2527 4155 3721 2246 109 0 0 chr17 66735857 66736150 -22768403 - AluSx SINE Alu -19 293 1 10098 209 72 50 chr17 66736150 66736746 -22767807 - L1MB7 LINE L1 -2961 3721 3140 1823 169 0 10 chr17 66736746 66737041 -22767512 - AluJb SINE Alu 0 312 21 10098 209 72 50 chr17 66737041 66737664 -22766889 - L1MB7 LINE L1 -3542 3140 2533 2178 220 50 13 chr17 66737664 66738205 -22766348 + MER68 LTR ERV1 2 562 0 10098 209 72 50 chr17 66738205 66740229 -22764324 - L1MB7 LINE L1 -4149 2533 1 244 279 0 0 chr17 66740230 66740291 -22764262 - L1M4 LINE L1 -2389 3757 3697 216 0 0 0 chr17 66740291 66740315 -22764238 + (TTG)n Simple_repeat Simple_repeat 2 25 0 5346 109 28 2 chr17 66740315 66741097 -22763456 - L1PA15 LINE L1 -11 6154 5413 2064 142 10 0 chr17 66741097 66741406 -22763147 - AluSx SINE Alu 0 312 1 5346 109 28 2 chr17 66741406 66741909 -22762644 - L1PA15 LINE L1 -752 5413 4924 1421 199 8 62 chr17 66741909 66742261 -22762292 - L1P LINE L1 -999 5147 4815 686 238 75 0 chr17 66742288 66742528 -22762025 - L1M4 LINE L1 -2453 3693 3436 * 2712 227 68 35 chr17 66742525 66742967 -22761586 - L1M4 LINE L1 -2499 3647 3221 3395 138 5 17 chr17 66742967 66743545 -22761008 - L1PA16 LINE L1 0 6166 5596 2712 227 68 35 chr17 66743545 66744269 -22760284 - L1M4 LINE L1 -2925 3221 2328 2638 242 198 28 chr17 66744464 66745804 -22758749 - HAL1 LINE L1 0 2507 940 585 223 103 54 chr17 66745804 66745894 -22758659 + MER58C DNA MER1_type 3 87 -2333 2013 71 0 0 chr17 66745894 66746133 -22758420 - AluSx SINE Alu -15 297 59 585 223 103 54 chr17 66746133 66746210 -22758343 + MER58C DNA MER1_type 87 179 -36 1207 208 72 4 chr17 66746210 66746460 -22758093 + Tigger7 DNA MER2_type 1 267 -2220 592 202 0 0 chr17 66746458 66746557 -22757996 + Tigger7 DNA MER2_type 2489 2587 0 * 1093 258 133 41 chr17 66746632 66747433 -22757120 - HAL1 LINE L1 -1559 948 23 27 0 0 0 chr17 66748080 66748107 -22756446 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr17 66748204 66748226 -22756327 + AT_rich Low_complexity Low_complexity 1 22 0 212 289 0 0 chr17 66748779 66748824 -22755729 + MIR SINE MIR 69 113 -149 1831 111 27 11 chr17 66748846 66749108 -22755445 + AluSx SINE Alu 44 309 -3 2146 114 10 0 chr17 66749631 66749920 -22754633 + AluSx SINE Alu 1 323 -5 22 35 0 0 chr17 66749920 66749949 -22754604 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr17 66750153 66750174 -22754379 + AT_rich Low_complexity Low_complexity 1 21 0 2147 119 0 0 chr17 66750265 66750558 -22753995 - AluSx SINE Alu -19 293 1 2385 88 0 0 chr17 66750668 66750964 -22753589 + AluSc SINE Alu 1 296 -13 4218 106 39 51 chr17 66751038 66751569 -22752984 + Tigger3b DNA MER2_type 2 523 -2505 2160 113 3 0 chr17 66751569 66751861 -22752692 - AluSx SINE Alu -15 297 5 4218 106 39 51 chr17 66751861 66752074 -22752479 + Tigger3b DNA MER2_type 523 737 -494 838 164 0 0 chr17 66752074 66752202 -22752351 + FLAM_A SINE Alu 1 128 -14 2804 136 56 19 chr17 66752202 66752688 -22751865 + Tigger3b DNA MER2_type 728 1231 0 935 109 0 0 chr17 66752845 66752973 -22751580 - AluJb SINE Alu -11 301 174 2020 110 0 0 chr17 66752973 66753237 -22751316 + AluSx SINE Alu 12 275 -37 195 42 0 0 chr17 66753243 66753267 -22751286 + (TAA)n Simple_repeat Simple_repeat 2 25 0 27 29 0 0 chr17 66753267 66753301 -22751252 + AT_rich Low_complexity Low_complexity 1 34 0 30 0 0 0 chr17 66754109 66754139 -22750414 + AT_rich Low_complexity Low_complexity 1 30 0 1224 205 107 3 chr17 66754331 66754648 -22749905 - L1ME1 LINE L1 -4 6162 5813 3189 232 97 106 chr17 66754651 66756782 -22747771 - L1MEc LINE L1 -4083 2313 202 1971 148 39 0 chr17 66756810 66757141 -22747412 + MER2 DNA MER2_type 1 344 0 3903 115 9 28 chr17 66757192 66757487 -22747066 + L1MA5A LINE L1 5658 5957 -340 2379 81 0 3 chr17 66757487 66757784 -22746769 + AluY SINE Alu 1 296 -15 3903 115 9 28 chr17 66757784 66757866 -22746687 + L1MA5A LINE L1 5957 6039 -258 1641 191 0 22 chr17 66757866 66758180 -22746373 - AluJo SINE Alu -5 307 1 3903 115 9 28 chr17 66758180 66758453 -22746100 + L1MA5A LINE L1 6039 6297 0 1629 169 72 26 chr17 66758513 66758820 -22745733 + Tigger7 DNA MER2_type 1 321 -412 2156 118 7 0 chr17 66758890 66759186 -22745367 - AluSx SINE Alu -14 298 1 2461 73 0 3 chr17 66759312 66759613 -22744940 - AluSc SINE Alu -9 300 1 2010 96 3 93 chr17 66759741 66760073 -22744480 - AluSx SINE Alu 0 302 1 1987 134 3 7 chr17 66760081 66760386 -22744167 - AluY SINE Alu -7 304 1 23 33 0 0 chr17 66761068 66761098 -22743455 + AT_rich Low_complexity Low_complexity 1 30 0 295 287 69 0 chr17 66761875 66761976 -22742577 + MER102a DNA MER1_type 6 113 -217 253 282 70 0 chr17 66761975 66762046 -22742507 + MER102a DNA MER1_type 252 327 -3 * 216 0 0 0 chr17 66763167 66763191 -22741362 + (TG)n Simple_repeat Simple_repeat 2 25 0 1546 171 26 39 chr17 66763665 66763970 -22740583 - AluJo SINE Alu -11 301 1 277 268 163 65 chr17 66764118 66764271 -22740282 + MIR3 SINE MIR 3 170 -38 1776 152 15 0 chr17 66765529 66765793 -22738760 + AluJo SINE Alu 1 268 -44 219 103 0 0 chr17 66765795 66765834 -22738719 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2092 129 3 0 chr17 66765878 66766173 -22738380 - AluSx SINE Alu -16 296 1 251 307 13 27 chr17 66766511 66766661 -22737892 + HAL1 LINE L1 163 310 -2197 * 821 271 124 60 chr17 66766645 66767062 -22737491 + HAL1 LINE L1 1688 2166 -341 2112 87 11 7 chr17 66767062 66767371 -22737182 + AluSp SINE Alu 20 313 0 821 271 124 60 chr17 66767371 66767621 -22736932 + HAL1 LINE L1 2166 2398 -109 1122 140 8 94 chr17 66767812 66768047 -22736506 + MER20 DNA MER1_type 1 215 -4 684 352 69 32 chr17 66769463 66769944 -22734609 + L2 LINE L2 2748 3233 -39 1898 117 46 29 chr17 66770018 66770325 -22734228 - AluSx SINE Alu 0 312 1 186 342 154 0 chr17 66770591 66770708 -22733845 + L2 LINE L2 3138 3272 0 2105 125 0 7 chr17 66770741 66771038 -22733515 - AluSx SINE Alu -17 295 1 637 127 76 34 chr17 66771286 66771404 -22733149 + FLAM_A SINE Alu 1 123 -10 25 31 0 0 chr17 66771655 66771687 -22732866 + AT_rich Low_complexity Low_complexity 1 32 0 876 213 142 140 chr17 66773186 66773551 -22731002 + MLT1E LTR MaLR 1 369 -224 1830 138 0 51 chr17 66773551 66773862 -22730691 + AluJb SINE Alu 1 295 -17 876 213 142 140 chr17 66773862 66774088 -22730465 + MLT1E LTR MaLR 369 593 0 1834 170 0 7 chr17 66774088 66774388 -22730165 + AluJo SINE Alu 1 298 -14 24 0 0 0 chr17 66774388 66774412 -22730141 + AT_rich Low_complexity Low_complexity 1 24 0 1151 197 219 13 chr17 66774937 66775393 -22729160 + L1M4 LINE L1 1945 2494 -3890 686 242 9 27 chr17 66775388 66775611 -22728942 + L1M4 LINE L1 5183 5401 -981 * 427 200 8 108 chr17 66776186 66776316 -22728237 + MLT1H LTR MaLR 405 521 -28 664 351 37 6 chr17 66777973 66778295 -22726258 + L1MEc LINE L1 41 372 -6024 715 238 27 0 chr17 66778346 66778493 -22726060 - MER5A DNA MER1_type -37 152 2 15703 121 17 1 chr17 66778613 66780993 -22723560 - Tigger1 DNA MER2_type 0 2418 1 2127 135 3 0 chr17 66781720 66782031 -22722522 - AluJb SINE Alu 0 312 1 21 0 0 0 chr17 66782393 66782414 -22722139 + AT_rich Low_complexity Low_complexity 1 21 0 489 207 96 7 chr17 66782710 66782845 -22721708 + MIR SINE MIR 84 230 -32 476 159 0 43 chr17 66782850 66782988 -22721565 + (CTA)n Simple_repeat Simple_repeat 1 132 0 461 307 93 68 chr17 66783210 66783430 -22721123 + L1M4c LINE L1 2891 3104 -3278 1774 173 14 0 chr17 66783430 66783713 -22720840 - AluJo SINE Alu -25 287 1 461 307 93 68 chr17 66783713 66784006 -22720547 + L1M4c LINE L1 3104 3417 -2965 4511 219 85 10 chr17 66784315 66785735 -22718818 + L1M3 LINE L1 2282 3797 -2585 32 0 0 0 chr17 66785735 66785767 -22718786 + AT_rich Low_complexity Low_complexity 1 32 0 1825 167 0 7 chr17 66785789 66786076 -22718477 - AluJo SINE Alu -21 291 7 2116 118 45 24 chr17 66786101 66786431 -22718122 + MER1B DNA MER1_type 1 337 0 3527 186 53 17 chr17 66786454 66786900 -22717653 + L1M3 LINE L1 4815 5243 -1161 2417 65 0 3 chr17 66786900 66787191 -22717362 + AluSc SINE Alu 1 290 -19 3527 186 53 17 chr17 66787191 66787756 -22716797 + L1M3 LINE L1 5243 5847 -557 2517 189 68 7 chr17 66787768 66788313 -22716240 - L1 LINE L1 -1674 4472 3895 4067 186 56 23 chr17 66788317 66789553 -22715000 + L1MB4 LINE L1 4893 6174 -6 387 248 41 108 chr17 66789571 66789820 -22714733 + L1ME3A LINE L1 5788 6013 -157 2254 100 7 0 chr17 66789820 66790111 -22714442 - AluSx SINE Alu -19 293 1 387 248 41 108 chr17 66790111 66790175 -22714378 + L1ME3A LINE L1 6013 6080 -90 23 0 0 0 chr17 66790241 66790264 -22714289 + AT_rich Low_complexity Low_complexity 1 23 0 206 282 113 0 chr17 66790297 66790368 -22714185 - L2 LINE L2 -656 2658 2580 904 217 110 75 chr17 66790376 66790814 -22713739 + LTR37B LTR ERV1 6 458 -10 398 345 96 34 chr17 66790826 66790965 -22713588 - L2 LINE L2 -756 2558 2429 2378 156 49 5 chr17 66790965 66791375 -22713178 + MSTC LTR MaLR 1 428 0 398 345 96 34 chr17 66791375 66791620 -22712933 - L2 LINE L2 -885 2429 2150 1504 164 80 39 chr17 66791648 66791818 -22712735 - AluJo SINE Alu -14 298 110 207 0 0 0 chr17 66791818 66791841 -22712712 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1504 164 80 39 chr17 66791841 66791956 -22712597 - AluJo SINE Alu -202 110 1 1271 229 131 53 chr17 66791961 66792585 -22711968 + L2 LINE L2 2478 3143 -170 1355 193 52 99 chr17 66792585 66793038 -22711515 - MLT1A2 LTR MaLR 0 467 1 550 258 48 30 chr17 66793039 66793206 -22711347 + L2 LINE L2 3140 3309 -4 2026 149 3 0 chr17 66793322 66793624 -22710929 + AluJb SINE Alu 1 303 -9 204 182 0 0 chr17 66793751 66793795 -22710758 + CT-rich Low_complexity Low_complexity 1 44 0 273 339 148 35 chr17 66793795 66794025 -22710528 - L2 LINE L2 -2798 516 261 1822 176 23 3 chr17 66795762 66796068 -22708485 + AluJb SINE Alu 1 312 0 362 209 18 0 chr17 66796633 66796743 -22707810 + L1MA7 LINE L1 2699 2810 -4039 1427 157 17 94 chr17 66796751 66797050 -22707503 + AluJo SINE Alu 5 280 -32 342 0 0 0 chr17 66797050 66797088 -22707465 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 1707 252 24 31 chr17 66797092 66797632 -22706921 + L1MA7 LINE L1 2818 3353 -3495 1219 117 38 19 chr17 66797632 66797845 -22706708 - Tigger1 DNA MER2_type 0 2418 2202 908 144 0 60 chr17 66797834 66798001 -22706552 - Tigger1 DNA MER2_type -2261 157 1 * 12707 166 37 13 chr17 66798001 66800992 -22703561 + L1MA7 LINE L1 3352 6418 -575 790 169 14 0 chr17 66800994 66801136 -22703417 + L1MA7 LINE L1 6550 6693 -300 * 803 105 38 8 chr17 66801134 66801267 -22703286 - L1MB2 LINE L1 -191 5980 5844 377 151 5 11 chr17 66801267 66801336 -22703217 - MLT1E3 LTR MaLR -45 573 479 573 161 54 0 chr17 66801337 66801449 -22703104 + L1MC1 LINE L1 6201 6318 -15 970 212 84 27 chr17 66802915 66803250 -22701303 + MSTD LTR MaLR 1 396 0 344 247 0 11 chr17 66803346 66803439 -22701114 + L1MC4 LINE L1 6612 6703 -1339 261 0 0 0 chr17 66803439 66803468 -22701085 + (TA)n Simple_repeat Simple_repeat 1 29 0 2327 97 6 0 chr17 66803468 66803779 -22700774 - AluSq SINE Alu 0 313 1 288 0 0 0 chr17 66803874 66803906 -22700647 + (CA)n Simple_repeat Simple_repeat 1 32 0 187 306 97 28 chr17 66804193 66804265 -22700288 + MIR SINE MIR 22 98 -110 226 292 0 0 chr17 66804276 66804324 -22700229 + L2 LINE L2 3224 3271 -1 1550 155 33 19 chr17 66805328 66805599 -22698954 - AluJo SINE Alu -17 295 21 892 136 8 0 chr17 66805642 66805774 -22698779 - AluSq/x SINE Alu -180 133 1 243 306 0 35 chr17 66806160 66806245 -22698308 + L2 LINE L2 3231 3312 -1 1801 207 80 111 chr17 66806702 66807377 -22697176 + MLT1E1 LTR MaLR 1 654 0 2762 242 33 21 chr17 66807663 66808414 -22696139 + L1MCb LINE L1 3 762 -5283 1133 249 44 64 chr17 66808595 66809119 -22695434 + L1MCb LINE L1 2188 2700 -3864 * 1597 178 39 0 chr17 66809117 66809426 -22695127 + L1MB7 LINE L1 5796 6116 -68 * 4047 165 46 29 chr17 66809414 66809722 -22694831 + L1MB4 LINE L1 5304 5605 -575 2204 102 0 7 chr17 66809722 66810016 -22694537 + AluSx SINE Alu 1 292 -20 4047 165 46 29 chr17 66810016 66810202 -22694351 + L1MB4 LINE L1 5605 5786 -394 468 0 0 0 chr17 66810202 66810254 -22694299 + (TA)n Simple_repeat Simple_repeat 1 52 0 4047 165 46 29 chr17 66810254 66810581 -22693972 + L1MB4 LINE L1 5786 6144 -36 2339 94 3 0 chr17 66810581 66810888 -22693665 + AluSp SINE Alu 1 308 -5 4047 165 46 29 chr17 66810888 66810926 -22693627 + L1MB4 LINE L1 6144 6180 0 263 249 103 79 chr17 66810919 66811084 -22693469 + HAL1 LINE L1 2332 2500 -7 * 301 222 26 77 chr17 66811143 66811260 -22693293 + L1M4 LINE L1 5233 5343 -803 7504 36 1 0 chr17 66811324 66812642 -22691911 + L1PA6 LINE L1 4860 6154 0 285 56 0 0 chr17 66812642 66812678 -22691875 + MLT1F LTR MaLR 462 497 -45 27 62 0 0 chr17 66813636 66813684 -22690869 + AT_rich Low_complexity Low_complexity 1 48 0 1890 157 7 0 chr17 66813933 66814226 -22690327 - AluJb SINE Alu -17 295 1 344 241 15 51 chr17 66815124 66815261 -22689292 + L1MC4 LINE L1 7907 8038 -4 2048 124 29 104 chr17 66815276 66815306 -22689247 + L1MB2 LINE L1 5759 5790 -381 4349 165 65 24 chr17 66815306 66816135 -22688418 - MER21B LTR ERV1 0 863 1 2048 124 29 104 chr17 66816135 66816547 -22688006 + L1MB2 LINE L1 5790 6168 -3 270 284 27 0 chr17 66816861 66816935 -22687618 - MER20B DNA MER1_type -654 129 54 185 308 39 0 chr17 66817213 66817265 -22687288 - L2 LINE L2 -14 3258 3205 736 186 0 16 chr17 66817340 66817469 -22687084 + FLAM_A SINE Alu 1 127 -6 1378 160 0 0 chr17 66817469 66817688 -22686865 + AluSg/x SINE Alu 86 304 -6 23 0 0 0 chr17 66817695 66817718 -22686835 + AT_rich Low_complexity Low_complexity 1 23 0 1658 143 59 4 chr17 66817718 66817990 -22686563 + AluSx SINE Alu 1 287 -25 2054 127 3 0 chr17 66818490 66818796 -22685757 + AluJb SINE Alu 1 307 0 298 238 186 29 chr17 66819231 66819403 -22685150 - MIR3 SINE MIR -1 207 9 244 250 29 29 chr17 66819558 66819626 -22684927 + MIR3 SINE MIR 114 181 -27 2396 80 0 0 chr17 66819685 66819987 -22684566 + AluSg SINE Alu 1 302 -8 4188 157 30 62 chr17 66820118 66820150 -22684403 + L1MB4 LINE L1 5023 5055 -1125 2564 45 0 6 chr17 66820150 66820461 -22684092 + AluY SINE Alu 3 311 0 4188 157 30 62 chr17 66820461 66821627 -22682926 + L1MB4 LINE L1 5055 6180 0 35 63 0 0 chr17 66821766 66821829 -22682724 + AT_rich Low_complexity Low_complexity 1 63 0 1653 164 17 31 chr17 66821839 66822131 -22682422 + AluJb SINE Alu 1 288 -24 2326 157 39 12 chr17 66822586 66822994 -22681559 + MSTB1 LTR MaLR 1 419 -13 296 318 173 17 chr17 66823792 66823971 -22680582 + HAL1 LINE L1 419 625 -1882 337 232 141 87 chr17 66823988 66824173 -22680380 + HAL1 LINE L1 2010 2204 -303 497 248 72 22 chr17 66824266 66824488 -22680065 + HAL1 LINE L1 2207 2439 -68 210 121 30 45 chr17 66824604 66824670 -22679883 + (TATAA)n Simple_repeat Simple_repeat 3 67 0 24 0 0 0 chr17 66824674 66824698 -22679855 + AT_rich Low_complexity Low_complexity 1 24 0 344 129 47 24 chr17 66824713 66824798 -22679755 - L1MB7 LINE L1 -3 6181 6095 498 150 22 25 chr17 66824813 66825128 -22679425 + (TA)n Simple_repeat Simple_repeat 1 314 0 379 98 60 27 chr17 66825145 66825482 -22679071 + (TA)n Simple_repeat Simple_repeat 1 348 0 352 133 41 82 chr17 66825494 66825592 -22678961 + L1MB7 LINE L1 6091 6184 0 809 316 72 31 chr17 66825604 66825678 -22678875 + L1ME4a LINE L1 4021 4091 -2055 2564 52 0 0 chr17 66825678 66825988 -22678565 - AluY SINE Alu -1 310 1 809 316 72 31 chr17 66825988 66826707 -22677846 + L1ME4a LINE L1 4091 4846 -1300 1689 169 0 53 chr17 66826720 66826855 -22677698 + AluJo SINE Alu 3 144 -168 1731 157 7 13 chr17 66826855 66827155 -22677398 + AluSx SINE Alu 1 298 -14 1689 169 0 53 chr17 66827155 66827339 -22677214 + AluJo SINE Alu 144 305 -7 21 36 0 0 chr17 66827339 66827367 -22677186 + AT_rich Low_complexity Low_complexity 1 28 0 437 290 152 8 chr17 66827628 66827983 -22676570 + L1ME4a LINE L1 5694 6099 -22 1207 227 43 67 chr17 66827994 66828307 -22676246 - L1ME3 LINE L1 0 6162 5843 2320 82 0 3 chr17 66828307 66828598 -22675955 + AluSp SINE Alu 1 290 -23 1207 227 43 67 chr17 66828598 66828689 -22675864 - L1ME3 LINE L1 -319 5843 5766 1629 146 53 4 chr17 66828689 66828970 -22675583 - AluJo SINE Alu -17 295 1 1207 227 43 67 chr17 66828970 66828983 -22675570 - L1ME3 LINE L1 -396 5766 5754 1328 228 3 48 chr17 66829215 66829251 -22675302 + L1M3c LINE L1 2 38 -6103 2184 121 0 0 chr17 66829251 66829558 -22674995 + AluSx SINE Alu 1 307 -5 1328 228 3 48 chr17 66829558 66829833 -22674720 + L1M3c LINE L1 38 299 -5842 1081 139 30 15 chr17 66829831 66830033 -22674520 + L1MA8 LINE L1 5758 5962 -329 * 3922 157 40 73 chr17 66830037 66830120 -22674433 + L1MC2 LINE L1 5487 5571 -773 1111 148 0 12 chr17 66830120 66830289 -22674264 - FAM SINE Alu -8 167 1 3922 157 40 73 chr17 66830289 66831084 -22673469 + L1MC2 LINE L1 5571 6336 -8 28 29 0 0 chr17 66831497 66831532 -22673021 + AT_rich Low_complexity Low_complexity 1 35 0 972 327 50 28 chr17 66832209 66832369 -22672184 - L2 LINE L2 -3 3310 3155 2314 102 62 8 chr17 66832369 66832742 -22671811 + L1PA13 LINE L1 5770 6162 -1 972 327 50 28 chr17 66832742 66833146 -22671407 - L2 LINE L2 -158 3155 2734 7359 114 6 5 chr17 66833147 66834694 -22669859 - L1MA2 LINE L1 0 6304 4759 1865 345 69 17 chr17 66834711 66835657 -22668896 - L2 LINE L2 -571 2743 1749 1541 257 114 47 chr17 66835666 66836410 -22668143 + L1MC4a LINE L1 5177 5403 -743 24 0 0 0 chr17 66836819 66836843 -22667710 + AT_rich Low_complexity Low_complexity 1 24 0 398 256 171 68 chr17 66837980 66838214 -22666339 + MLT1K LTR MaLR 156 413 -175 301 194 0 15 chr17 66838216 66838283 -22666270 + MLT1K LTR MaLR 523 588 0 229 135 19 58 chr17 66839620 66839672 -22664881 - Alu SINE Alu -133 170 121 299 239 45 0 chr17 66840100 66840188 -22664365 - L1ME4a LINE L1 -83 6038 5947 1425 211 4 0 chr17 66840255 66840530 -22664023 + AluJo SINE Alu 33 308 -4 696 266 122 51 chr17 66840670 66841137 -22663416 - L1ME4a LINE L1 -303 5818 5319 1486 156 57 25 chr17 66841143 66841425 -22663128 - AluSx SINE Alu -17 295 5 755 160 15 0 chr17 66841465 66841596 -22662957 + FLAM_C SINE Alu 1 133 -10 514 97 0 0 chr17 66841604 66841676 -22662877 + AluJ/FRAM SINE Alu 220 291 -21 354 230 108 12 chr17 66841875 66842070 -22662483 + L1MC4a LINE L1 5693 5823 -298 28 79 0 0 chr17 66842302 66842365 -22662188 + AT_rich Low_complexity Low_complexity 1 63 0 402 21 0 0 chr17 66842446 66842455 -22662098 + (TG)n Simple_repeat Simple_repeat 1 56 0 402 21 0 0 chr17 66842455 66842502 -22662051 + (TG)n Simple_repeat Simple_repeat 2 48 0 1305 124 35 5 chr17 66842526 66842727 -22661826 - AluSx SINE Alu -105 207 1 44 46 0 0 chr17 66842761 66842826 -22661727 + AT_rich Low_complexity Low_complexity 1 65 0 355 233 0 0 chr17 66842923 66842983 -22661570 + AluJ/FLAM SINE Alu 1 60 -242 423 0 0 0 chr17 66842999 66843046 -22661507 + (TG)n Simple_repeat Simple_repeat 2 48 0 198 167 0 0 chr17 66843091 66843127 -22661426 + (TA)n Simple_repeat Simple_repeat 1 36 0 357 270 103 60 chr17 66843538 66843723 -22660830 + MIR3 SINE MIR 16 208 0 280 188 0 0 chr17 66843701 66843749 -22660804 + L3 LINE CR1 1526 1573 -4 * 21 57 0 0 chr17 66844479 66844514 -22660039 + AT_rich Low_complexity Low_complexity 1 35 0 2001 99 21 7 chr17 66844754 66845037 -22659516 - AluSx SINE Alu -25 287 1 21 0 0 0 chr17 66847360 66847381 -22657172 + AT_rich Low_complexity Low_complexity 1 21 0 2083 118 6 6 chr17 66849254 66849567 -22654986 - AluSp SINE Alu 0 313 1 2074 138 0 0 chr17 66849714 66850018 -22654535 + AluSx SINE Alu 1 304 -8 240 403 43 7 chr17 66851347 66851486 -22653067 + L2 LINE L2 3129 3272 0 1136 247 139 38 chr17 66852417 66852971 -22651582 + L1ME4a LINE L1 5257 5866 -304 1248 249 12 3 chr17 66854842 66855176 -22649377 + L1MC4 LINE L1 7090 7426 -616 440 194 29 10 chr17 66855183 66855286 -22649267 + HAL1b LINE L1 586 690 -658 267 169 270 0 chr17 66855387 66855476 -22649077 + L1ME4a LINE L1 6008 6120 -1 581 217 174 6 chr17 66855603 66855764 -22648789 + MER3 DNA MER1_type 1 188 -21 752 180 0 0 chr17 66856115 66856237 -22648316 + FLAM_C SINE Alu 1 122 -11 6948 87 13 14 chr17 66856779 66856948 -22647605 + L1MA3 LINE L1 5304 5472 -833 2344 94 0 0 chr17 66856948 66857246 -22647307 + AluSx SINE Alu 1 298 -14 6948 87 13 14 chr17 66857246 66858079 -22646474 + L1MA3 LINE L1 5472 6305 0 264 315 0 0 chr17 66858265 66858338 -22646215 + HAL1 LINE L1 1 73 -2434 599 328 100 4 chr17 66858353 66858603 -22645950 + Charlie8 DNA MER1_type 3 276 -2141 2759 124 68 48 chr17 66858699 66858712 -22645841 - MER51A LTR ERV1 -117 517 506 2295 122 0 0 chr17 66858712 66859023 -22645530 + AluSx SINE Alu 1 311 -1 2759 124 68 48 chr17 66859023 66859529 -22645024 - MER51A LTR ERV1 -128 506 1 1214 155 0 10 chr17 66859564 66859757 -22644796 - AluJo SINE Alu -4 308 118 499 234 66 66 chr17 66859767 66859934 -22644619 - FAM SINE Alu -8 167 1 269 243 191 7 chr17 66861318 66861454 -22643099 + L1MEc LINE L1 38 198 -6198 532 249 102 28 chr17 66861469 66861794 -22642759 + L1MEc LINE L1 1028 1376 -5020 360 0 0 0 chr17 66861802 66861842 -22642711 + (CA)n Simple_repeat Simple_repeat 2 41 0 1933 114 54 4 chr17 66861879 66862159 -22642394 - AluSq SINE Alu -19 294 1 339 268 36 1 chr17 66862180 66862304 -22642249 + L1MDa LINE L1 412 1517 -810 4878 161 48 19 chr17 66862306 66862973 -22641580 + L1MB4 LINE L1 4588 5234 -946 6911 161 12 39 chr17 66862973 66863048 -22641505 + L1PA13 LINE L1 4020 4095 -2068 2439 90 0 0 chr17 66863048 66863359 -22641194 + AluY SINE Alu 1 311 0 6911 161 12 39 chr17 66863359 66863667 -22640886 + L1PA13 LINE L1 4095 4410 -1753 423 0 0 0 chr17 66863667 66863714 -22640839 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6911 161 12 39 chr17 66863714 66865488 -22639065 + L1PA13 LINE L1 4410 6163 0 1833 163 3 3 chr17 66865491 66865779 -22638774 + AluSx SINE Alu 1 288 -24 4878 161 48 19 chr17 66865779 66866616 -22637937 + L1MB4 LINE L1 5235 6179 -1 5601 226 115 32 chr17 66866657 66867973 -22636580 + L1MDa LINE L1 1637 2843 -3303 2326 95 0 3 chr17 66867973 66868278 -22636275 - AluSq SINE Alu -9 304 1 5601 226 115 32 chr17 66868278 66869513 -22635040 + L1MDa LINE L1 2843 4369 -1777 2108 139 12 0 chr17 66869511 66869848 -22634705 - L1MB3 LINE L1 -258 5925 5585 * 1898 223 85 28 chr17 66869864 66870394 -22634159 + L1MC4 LINE L1 6525 7084 -958 1905 236 99 14 chr17 66870416 66871010 -22633543 + L1MC4 LINE L1 7261 7905 -137 2102 130 0 3 chr17 66871432 66871731 -22632822 + AluSx SINE Alu 1 298 -14 228 125 0 0 chr17 66871883 66871915 -22632638 - MER58A DNA MER1_type -3 221 190 963 209 36 10 chr17 66871961 66872157 -22632396 - MER58A DNA MER1_type -23 201 1 211 125 62 31 chr17 66872289 66872353 -22632200 + (TA)n Simple_repeat Simple_repeat 1 66 0 1174 218 118 72 chr17 66872545 66873003 -22631550 + MLT1H LTR MaLR 17 495 -54 21 57 0 0 chr17 66873192 66873227 -22631326 + AT_rich Low_complexity Low_complexity 1 35 0 422 260 60 7 chr17 66873283 66873433 -22631120 + HAL1 LINE L1 1933 2090 -417 329 255 60 50 chr17 66873519 66873719 -22630834 + HAL1 LINE L1 2265 2466 -41 371 364 75 13 chr17 66873751 66873979 -22630574 + L1M4 LINE L1 4802 5043 -1103 2036 130 7 16 chr17 66874153 66874460 -22630093 - AluJb SINE Alu -8 304 1 399 238 75 20 chr17 66874604 66874751 -22629802 - L2 LINE L2 0 3313 3159 24 0 0 0 chr17 66874756 66874780 -22629773 + AT_rich Low_complexity Low_complexity 1 24 0 769 235 48 0 chr17 66874935 66875122 -22629431 + MIR SINE MIR 1 196 -66 262 161 16 81 chr17 66875212 66875274 -22629279 + MIR SINE MIR 189 246 -16 216 238 48 0 chr17 66875341 66875404 -22629149 + GA-rich Low_complexity Low_complexity 3 68 0 522 47 0 0 chr17 66876327 66876391 -22628162 - AluY SINE Alu -234 77 14 1661 55 15 0 chr17 66876391 66876638 -22627915 + AluY SINE Alu 82 331 0 24 0 0 0 chr17 66876808 66876832 -22627721 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 66877337 66877366 -22627187 + AT_rich Low_complexity Low_complexity 1 29 0 1972 125 20 10 chr17 66878121 66878425 -22626128 + AluSx SINE Alu 1 307 -5 836 163 0 0 chr17 66878539 66878662 -22625891 + FLAM_C SINE Alu 1 123 -10 4304 137 56 14 chr17 66878696 66879768 -22624785 + L1MA5 LINE L1 4557 5665 -635 1403 183 4 16 chr17 66879768 66880025 -22624528 - AluJo SINE Alu -58 254 1 3474 134 15 21 chr17 66880029 66880640 -22623913 + L1MA5 LINE L1 5693 6299 -1 189 213 0 0 chr17 66880746 66880793 -22623760 + (CTA)n Simple_repeat Simple_repeat 2 48 0 692 253 50 40 chr17 66880795 66880993 -22623560 - MIR SINE MIR -22 240 41 2601 164 28 42 chr17 66880993 66881476 -22623077 + L1MA9 LINE L1 5724 6199 -113 2027 165 72 10 chr17 66881476 66881877 -22622676 + MSTB LTR MaLR 1 426 0 2601 164 28 42 chr17 66881877 66881960 -22622593 + L1MA9 LINE L1 6199 6282 -30 1856 166 3 16 chr17 66881966 66882273 -22622280 - AluJo SINE Alu -9 303 1 217 179 0 0 chr17 66882297 66882336 -22622217 - MIR SINE MIR -212 50 12 1590 208 0 16 chr17 66882347 66882655 -22621898 + AluJo SINE Alu 1 303 -9 503 259 86 0 chr17 66882839 66882978 -22621575 + MIR SINE MIR 41 191 -71 329 309 184 0 chr17 66882978 66883146 -22621407 - L2 LINE L2 -3 3310 3112 1318 165 39 40 chr17 66883362 66883946 -22620607 - Charlie1a DNA MER1_type -561 894 242 2017 68 0 4 chr17 66883987 66884236 -22620317 + AluY SINE Alu 43 290 -21 30 0 0 0 chr17 66884236 66884266 -22620287 + AT_rich Low_complexity Low_complexity 1 30 0 387 60 0 0 chr17 66884271 66884321 -22620232 + (GA)n Simple_repeat Simple_repeat 2 51 0 882 224 14 56 chr17 66884321 66884429 -22620124 - Charlie1a DNA MER1_type -2556 205 109 2084 126 3 7 chr17 66884429 66884731 -22619822 - AluJb SINE Alu -11 301 1 882 224 14 56 chr17 66884731 66884836 -22619717 - Charlie1a DNA MER1_type -2652 109 1 395 259 80 37 chr17 66884871 66885033 -22619520 - MIR3 SINE MIR 0 208 40 24 0 0 0 chr17 66886194 66886218 -22618335 + AT_rich Low_complexity Low_complexity 1 24 0 1456 176 0 101 chr17 66886220 66886556 -22617997 - AluJo SINE Alu 0 302 1 417 307 14 29 chr17 66887792 66887932 -22616621 - MIR SINE MIR -112 150 13 2418 74 7 0 chr17 66888149 66888445 -22616108 - AluSp SINE Alu -15 298 1 2031 128 3 7 chr17 66888590 66888888 -22615665 + AluSx SINE Alu 1 297 -15 2416 92 0 0 chr17 66888990 66889293 -22615260 + AluSx SINE Alu 1 303 -9 731 303 51 28 chr17 66889422 66889815 -22614738 - L1M4 LINE L1 -1104 5042 4641 839 196 35 79 chr17 66889883 66890112 -22614441 + MER20 DNA MER1_type 1 219 0 2073 194 127 82 chr17 66890389 66890431 -22614122 + L1ME3A LINE L1 5285 5324 -846 2063 142 3 0 chr17 66890431 66890733 -22613820 + AluSx SINE Alu 1 303 -9 2073 194 127 82 chr17 66890733 66891521 -22613032 + L1ME3A LINE L1 5324 6150 -20 962 171 10 16 chr17 66891636 66891829 -22612724 + L1ME1 LINE L1 4840 5031 -1115 2881 203 54 49 chr17 66891841 66892038 -22612515 + L1ME1 LINE L1 5254 5449 -717 1336 213 27 30 chr17 66892038 66892334 -22612219 + AluJb SINE Alu 1 295 -17 2881 203 54 49 chr17 66892334 66892469 -22612084 + L1ME1 LINE L1 5449 5582 -584 2174 113 13 0 chr17 66892469 66892769 -22611784 + AluSx SINE Alu 1 304 -8 2881 203 54 49 chr17 66892769 66893227 -22611326 + L1ME1 LINE L1 5582 6049 -117 434 200 28 76 chr17 66893252 66893340 -22611213 + L1MA10 LINE L1 6190 6270 -64 2147 129 0 3 chr17 66893340 66893642 -22610911 + AluSx SINE Alu 1 301 -11 434 200 28 76 chr17 66893642 66893698 -22610855 + L1MA10 LINE L1 6270 6327 -7 578 352 76 17 chr17 66893760 66894166 -22610387 - L2 LINE L2 0 3313 2884 450 289 50 96 chr17 66894186 66894404 -22610149 + MLT1L LTR MaLR 1 208 -407 29 0 0 0 chr17 66894586 66894615 -22609938 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr17 66895773 66895797 -22608756 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 939 214 100 32 chr17 66896098 66896323 -22608230 - Charlie4a DNA MER1_type -1453 508 300 960 206 98 0 chr17 66896323 66896527 -22608026 + MER58A DNA MER1_type 1 224 0 939 214 100 32 chr17 66896527 66896572 -22607981 - Charlie4a DNA MER1_type -1661 300 259 2040 95 20 17 chr17 66896572 66896868 -22607685 + AluSg SINE Alu 1 297 -13 939 214 100 32 chr17 66896868 66897033 -22607520 - Charlie4a DNA MER1_type -1702 259 16 248 325 0 0 chr17 66897785 66897862 -22606691 - MIR SINE MIR -67 195 119 210 143 0 82 chr17 66898137 66898186 -22606367 + MIR3 SINE MIR 162 206 -2 386 370 56 0 chr17 66898967 66899129 -22605424 + L2 LINE L2 3102 3272 0 271 362 102 35 chr17 66899203 66899790 -22604763 + L2 LINE L2 2395 3056 -216 2255 108 0 0 chr17 66899978 66900274 -22604279 - AluSq SINE Alu -17 296 1 6124 107 37 90 chr17 66900563 66900938 -22603615 - Tigger1 DNA MER2_type -1336 1082 689 549 143 0 0 chr17 66900938 66901022 -22603531 + AluJ/FLAM SINE Alu 1 84 -228 6124 107 37 90 chr17 66901022 66901705 -22602848 - Tigger1 DNA MER2_type -1729 689 2 2301 106 0 0 chr17 66906013 66906325 -22598228 + AluSx SINE Alu 1 312 0 250 341 94 14 chr17 66906465 66906603 -22597950 - L2 LINE L2 -95 3177 3029 839 235 34 55 chr17 66906626 66906881 -22597672 + MIR SINE MIR 2 252 -10 2244 94 3 0 chr17 66907355 66907664 -22596889 + AluSx SINE Alu 1 310 -2 539 284 57 10 chr17 66908436 66908630 -22595923 - MIR3 SINE MIR -1 207 5 339 329 64 27 chr17 66909742 66909928 -22594625 - MIR SINE MIR -61 201 9 458 303 18 12 chr17 66910140 66910305 -22594248 + MIR3 SINE MIR 20 185 -23 314 147 0 0 chr17 66911067 66911135 -22593418 - L1MB7 LINE L1 -5 6179 6112 2165 108 7 0 chr17 66911135 66911441 -22593112 + AluSp SINE Alu 1 308 -5 712 135 71 16 chr17 66912360 66912486 -22592067 + FLAM_C SINE Alu 1 133 0 231 182 36 18 chr17 66913519 66913574 -22590979 - MIR SINE MIR -89 119 64 2326 90 0 0 chr17 66913585 66913886 -22590667 + AluSx SINE Alu 1 301 -11 2285 90 0 0 chr17 66915303 66915603 -22588950 + AluY SINE Alu 1 300 -11 929 328 130 28 chr17 66915746 66916383 -22588170 + L2 LINE L2 2034 2735 -579 298 260 192 20 chr17 66916474 66916620 -22587933 + L2 LINE L2 2921 3091 -181 187 316 53 0 chr17 66916669 66916745 -22587808 - L2 LINE L2 -11 3261 3182 299 232 18 89 chr17 66916769 66916881 -22587672 + L2 LINE L2 3138 3241 -31 1965 109 20 3 chr17 66916971 66917264 -22587289 + AluSx SINE Alu 1 298 -14 210 270 45 90 chr17 66917405 66917494 -22587059 + L3b LINE CR1 1489 1573 -10 1467 149 13 70 chr17 66917837 66918138 -22586415 - AluJo SINE Alu -12 300 17 24 0 0 0 chr17 66918167 66918191 -22586362 + AT_rich Low_complexity Low_complexity 1 24 0 2153 95 0 0 chr17 66918748 66919033 -22585520 - AluSx SINE Alu -27 285 1 611 240 127 26 chr17 66919033 66919262 -22585291 - MIR SINE MIR -4 258 7 2162 107 3 0 chr17 66919590 66919890 -22584663 + AluSq SINE Alu 1 301 -12 2120 111 0 3 chr17 66919901 66920199 -22584354 + AluSx SINE Alu 1 297 -15 810 306 82 5 chr17 66920199 66920637 -22583916 - L1M4 LINE L1 -1609 4537 4066 2196 99 0 3 chr17 66921638 66921942 -22582611 - AluSg SINE Alu -7 303 1 2030 113 0 0 chr17 66922476 66922794 -22581759 + AluSx SINE Alu 1 318 0 279 0 0 0 chr17 66922798 66922829 -22581724 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1935 130 7 0 chr17 66924296 66924588 -22579965 - AluJb SINE Alu -16 296 3 709 133 35 9 chr17 66924591 66924704 -22579849 + MLT1A2 LTR MaLR 259 374 0 404 298 273 20 chr17 66925063 66925803 -22578750 + L2 LINE L2 2244 3211 -102 2241 246 168 54 chr17 66927683 66928639 -22575914 + L2 LINE L2 1046 2110 -1204 2084 95 3 0 chr17 66928639 66928923 -22575630 - AluSx SINE Alu -15 297 13 252 122 0 0 chr17 66929487 66929528 -22575025 + (T)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 66929995 66930016 -22574537 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr17 66930467 66930494 -22574059 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr17 66930714 66930734 -22573819 + (ACTAG)n Simple_repeat Simple_repeat 5 24 0 2280 84 0 0 chr17 66933260 66933559 -22570994 + AluY SINE Alu 1 299 -12 280 311 57 85 chr17 66933772 66933986 -22570567 - MIR SINE MIR -40 222 17 1118 246 125 44 chr17 66987882 66988362 -22516191 + L1ME4a LINE L1 5337 5855 -315 1430 176 0 101 chr17 66989731 66990067 -22514486 + AluJo SINE Alu 1 302 0 24 0 0 0 chr17 66990069 66990093 -22514460 + AT_rich Low_complexity Low_complexity 1 24 0 401 259 80 37 chr17 66991254 66991416 -22513137 + MIR3 SINE MIR 40 208 0 356 289 29 29 chr17 66991451 66991555 -22512998 + Charlie1 DNA MER1_type 1 104 -2657 676 111 0 0 chr17 66991556 66991655 -22512898 + AluJ/FLAM SINE Alu 1 99 -213 474 240 10 0 chr17 66991762 66991866 -22512687 + L1MC4a LINE L1 7242 7346 -462 444 194 29 10 chr17 66991873 66991976 -22512577 + HAL1b LINE L1 586 690 -658 227 212 82 35 chr17 66991986 66992071 -22512482 + L1ME3A LINE L1 6082 6170 0 276 169 270 0 chr17 66992077 66992166 -22512387 + L1ME4a LINE L1 6008 6120 -1 589 217 174 6 chr17 66992293 66992454 -22512099 + MER3 DNA MER1_type 1 188 -21 738 180 0 0 chr17 66992805 66992927 -22511626 + FLAM_C SINE Alu 1 122 -11 6971 87 13 14 chr17 66993469 66993638 -22510915 + L1MA3 LINE L1 5304 5472 -833 2309 94 0 0 chr17 66993638 66993936 -22510617 + AluSx SINE Alu 1 298 -14 6971 87 13 14 chr17 66993936 66994769 -22509784 + L1MA3 LINE L1 5472 6305 0 231 267 22 11 chr17 66994869 66994959 -22509594 + L1 LINE L1 4946 5036 -1110 * 265 315 0 0 chr17 66994955 66995028 -22509525 + HAL1 LINE L1 1 73 -2434 603 328 100 4 chr17 66995043 66995293 -22509260 + Charlie8 DNA MER1_type 3 276 -2141 2734 124 68 48 chr17 66995389 66995402 -22509151 - MER51A LTR ERV1 -117 517 506 2264 122 0 0 chr17 66995402 66995713 -22508840 + AluSx SINE Alu 1 311 -1 2734 124 68 48 chr17 66995713 66996219 -22508334 - MER51A LTR ERV1 -128 506 1 1207 155 0 10 chr17 66996254 66996447 -22508106 - AluJo SINE Alu -4 308 118 485 234 66 66 chr17 66996457 66996624 -22507929 - FAM SINE Alu -8 167 1 1837 142 7 17 chr17 66997776 66998072 -22506481 - AluJb SINE Alu -19 293 1 404 238 75 20 chr17 66998216 66998363 -22506190 - L2 LINE L2 0 3313 3159 24 0 0 0 chr17 66998368 66998392 -22506161 + AT_rich Low_complexity Low_complexity 1 24 0 772 235 48 0 chr17 66998547 66998734 -22505819 + MIR SINE MIR 1 196 -66 264 161 16 81 chr17 66998824 66998886 -22505667 + MIR SINE MIR 189 246 -16 216 238 48 0 chr17 66998953 66999016 -22505537 + GA-rich Low_complexity Low_complexity 3 68 0 512 47 0 0 chr17 66999939 67000003 -22504550 - AluY SINE Alu -234 77 14 1633 55 15 0 chr17 67000003 67000250 -22504303 + AluY SINE Alu 82 331 0 24 0 0 0 chr17 67000420 67000444 -22504109 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 67000948 67000977 -22503576 + AT_rich Low_complexity Low_complexity 1 29 0 1941 125 20 10 chr17 67001732 67002036 -22502517 + AluSx SINE Alu 1 307 -5 824 163 0 0 chr17 67002150 67002273 -22502280 + FLAM_C SINE Alu 1 123 -10 4335 137 56 14 chr17 67002307 67003379 -22501174 + L1MA5 LINE L1 4557 5665 -635 1403 183 4 16 chr17 67003379 67003636 -22500917 - AluJo SINE Alu -58 254 1 3474 134 15 21 chr17 67003640 67004251 -22500302 + L1MA5 LINE L1 5693 6299 -1 189 213 0 0 chr17 67004357 67004404 -22500149 + (CTA)n Simple_repeat Simple_repeat 2 48 0 692 253 50 40 chr17 67004406 67004604 -22499949 - MIR SINE MIR -22 240 41 2601 164 28 42 chr17 67004604 67005087 -22499466 + L1MA9 LINE L1 5724 6199 -113 2027 165 72 10 chr17 67005087 67005488 -22499065 + MSTB LTR MaLR 1 426 0 2601 164 28 42 chr17 67005488 67005571 -22498982 + L1MA9 LINE L1 6199 6282 -30 1856 166 3 16 chr17 67005577 67005884 -22498669 - AluJo SINE Alu -9 303 1 217 179 0 0 chr17 67005908 67005947 -22498606 - MIR SINE MIR -212 50 12 1590 208 0 16 chr17 67005958 67006266 -22498287 + AluJo SINE Alu 1 303 -9 503 259 86 0 chr17 67006450 67006589 -22497964 + MIR SINE MIR 41 191 -71 329 309 184 0 chr17 67006589 67006757 -22497796 - L2 LINE L2 -3 3310 3112 1318 165 39 40 chr17 67006973 67007557 -22496996 - Charlie1 DNA MER1_type -561 2200 1548 1516 62 0 0 chr17 67007598 67007776 -22496777 + AluY SINE Alu 43 220 -91 269 243 191 7 chr17 67008359 67008495 -22496058 + L1MEc LINE L1 38 198 -6198 532 249 102 28 chr17 67008510 67008835 -22495718 + L1MEc LINE L1 1028 1376 -5020 360 0 0 0 chr17 67008843 67008883 -22495670 + (CA)n Simple_repeat Simple_repeat 2 41 0 1933 114 54 4 chr17 67008920 67009200 -22495353 - AluSq SINE Alu -19 294 1 339 268 36 1 chr17 67009221 67009345 -22495208 + L1ME3A LINE L1 412 1517 -810 4878 161 48 19 chr17 67009347 67010014 -22494539 + L1MB4 LINE L1 4588 5234 -946 6911 161 12 39 chr17 67010014 67010089 -22494464 + L1PA13 LINE L1 4020 4095 -2068 2439 90 0 0 chr17 67010089 67010400 -22494153 + AluY SINE Alu 1 311 0 6911 161 12 39 chr17 67010400 67010708 -22493845 + L1PA13 LINE L1 4095 4410 -1753 423 0 0 0 chr17 67010708 67010755 -22493798 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6911 161 12 39 chr17 67010755 67012529 -22492024 + L1PA13 LINE L1 4410 6163 0 1833 163 3 3 chr17 67012532 67012820 -22491733 + AluSx SINE Alu 1 288 -24 4878 161 48 19 chr17 67012820 67013657 -22490896 + L1MB4 LINE L1 5235 6179 -1 5601 226 115 32 chr17 67013698 67015014 -22489539 + L1ME3A LINE L1 1637 2843 -3303 2326 95 0 3 chr17 67015014 67015319 -22489234 - AluSq SINE Alu -9 304 1 5601 226 115 32 chr17 67015319 67016554 -22487999 + L1ME3A LINE L1 2843 4369 -1777 2108 139 12 0 chr17 67016552 67016889 -22487664 - L1MB3 LINE L1 -258 5925 5585 * 1898 223 85 28 chr17 67016905 67017435 -22487118 + L1MC4 LINE L1 6525 7084 -958 1905 236 99 14 chr17 67017457 67018051 -22486502 + L1MC4 LINE L1 7261 7905 -137 2102 130 0 3 chr17 67018473 67018772 -22485781 + AluSx SINE Alu 1 298 -14 228 125 0 0 chr17 67018924 67018956 -22485597 - MER58A DNA MER1_type -3 221 190 963 209 36 10 chr17 67019002 67019198 -22485355 - MER58A DNA MER1_type -23 201 1 211 125 62 31 chr17 67019330 67019394 -22485159 + (TA)n Simple_repeat Simple_repeat 1 66 0 1174 218 118 72 chr17 67019586 67020044 -22484509 + MLT1H LTR MaLR 17 495 -54 21 57 0 0 chr17 67020233 67020268 -22484285 + AT_rich Low_complexity Low_complexity 1 35 0 422 260 60 7 chr17 67020324 67020474 -22484079 + HAL1 LINE L1 1933 2090 -417 329 255 60 50 chr17 67020560 67020760 -22483793 + HAL1 LINE L1 2265 2466 -41 371 364 75 13 chr17 67020792 67021020 -22483533 + L1ME3A LINE L1 4802 5043 -1103 2031 128 3 7 chr17 67021324 67021622 -22482931 + AluSx SINE Alu 1 297 -15 2416 92 0 0 chr17 67021724 67022027 -22482526 + AluSx SINE Alu 1 303 -9 731 303 51 28 chr17 67022156 67022549 -22482004 - L1M4 LINE L1 -1104 5042 4641 839 196 35 79 chr17 67022617 67022846 -22481707 + MER20 DNA MER1_type 1 219 0 2073 194 127 82 chr17 67023123 67023165 -22481388 + L1ME3A LINE L1 5285 5324 -846 2063 142 3 0 chr17 67023165 67023467 -22481086 + AluSx SINE Alu 1 303 -9 2073 194 127 82 chr17 67023467 67024255 -22480298 + L1ME3A LINE L1 5324 6150 -20 962 171 10 16 chr17 67024370 67024563 -22479990 + L1ME1 LINE L1 4840 5031 -1115 2881 203 54 49 chr17 67024575 67024772 -22479781 + L1ME1 LINE L1 5254 5449 -717 1336 213 27 30 chr17 67024772 67025068 -22479485 + AluJb SINE Alu 1 295 -17 2881 203 54 49 chr17 67025068 67025203 -22479350 + L1ME1 LINE L1 5449 5582 -584 2174 113 13 0 chr17 67025203 67025503 -22479050 + AluSx SINE Alu 1 304 -8 2881 203 54 49 chr17 67025503 67025961 -22478592 + L1ME1 LINE L1 5582 6049 -117 434 200 28 76 chr17 67025986 67026074 -22478479 + L1MA10 LINE L1 6190 6270 -64 2147 129 0 3 chr17 67026074 67026376 -22478177 + AluSx SINE Alu 1 301 -11 434 200 28 76 chr17 67026376 67026432 -22478121 + L1MA10 LINE L1 6270 6327 -7 578 352 76 17 chr17 67026494 67026900 -22477653 - L2 LINE L2 0 3313 2884 450 289 50 96 chr17 67026920 67027138 -22477415 + MLT1L LTR MaLR 1 208 -407 29 0 0 0 chr17 67027320 67027349 -22477204 + AT_rich Low_complexity Low_complexity 1 29 0 479 276 0 0 chr17 67028075 67028173 -22476380 + MER81 DNA DNA 17 114 0 2143 130 0 0 chr17 67028220 67028519 -22476034 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr17 67028963 67028988 -22475565 + AT_rich Low_complexity Low_complexity 1 25 0 2344 88 3 0 chr17 67029154 67029451 -22475102 - AluSp SINE Alu -15 298 1 183 80 0 0 chr17 67029507 67029532 -22475021 + (CATA)n Simple_repeat Simple_repeat 2 26 0 820 216 66 0 chr17 67029686 67029853 -22474700 + FRAM SINE Alu 1 171 -5 1104 140 34 11 chr17 67030149 67030327 -22474226 - AluJb SINE Alu -45 267 86 746 254 64 50 chr17 67031006 67031165 -22473388 + L1MB8 LINE L1 5532 5687 -491 2124 110 3 0 chr17 67031165 67031456 -22473097 + AluSx SINE Alu 9 300 -12 746 254 64 50 chr17 67031456 67031675 -22472878 + L1MB8 LINE L1 5687 5888 -290 434 278 173 12 chr17 67032502 67032664 -22471889 + MIR SINE MIR 10 197 -65 223 119 24 24 chr17 67033026 67033068 -22471485 + L2 LINE L2 3263 3304 -9 358 288 216 7 chr17 67033071 67033224 -22471329 + MIR SINE MIR 2 186 -76 218 205 0 0 chr17 67033618 67033657 -22470896 + MIR3 SINE MIR 165 203 -5 244 306 59 29 chr17 67035189 67035359 -22469194 + L1ME LINE L1 5595 5769 -352 2589 30 0 0 chr17 67035630 67035925 -22468628 + AluY SINE Alu 1 295 -16 239 182 152 0 chr17 67036697 67036763 -22467790 - MIR SINE MIR -68 194 119 700 112 0 0 chr17 67036861 67036959 -22467594 + AluS SINE Alu 1 98 -215 307 350 32 8 chr17 67037081 67037204 -22467349 + L2 LINE L2 2929 3054 -218 2507 67 0 0 chr17 67037347 67037645 -22466908 + AluY SINE Alu 1 298 -13 4245 169 4 0 chr17 67037750 67038492 -22466061 - L1P LINE L1 -903 5243 4499 1181 116 12 76 chr17 67038518 67038574 -22465979 + L1PA14 LINE L1 5255 5313 -848 2166 114 10 0 chr17 67038574 67038871 -22465682 + AluSp SINE Alu 1 300 -13 1181 116 12 76 chr17 67038871 67038899 -22465654 + L1PA14 LINE L1 5313 5341 -820 2064 110 0 39 chr17 67038899 67039209 -22465344 + AluSg SINE Alu 1 298 -12 1181 116 12 76 chr17 67039209 67039374 -22465179 + L1PA14 LINE L1 5341 5489 -672 332 161 0 0 chr17 67039377 67039433 -22465120 + U6 snRNA snRNA 1 56 -51 2366 68 0 3 chr17 67039435 67039730 -22464823 - AluY SINE Alu -17 294 1 2122 115 16 13 chr17 67039730 67040035 -22464518 - AluSg SINE Alu -2 308 3 22 0 0 0 chr17 67040039 67040061 -22464492 + AT_rich Low_complexity Low_complexity 1 22 0 4426 107 19 10 chr17 67040061 67040736 -22463817 + L1PA14 LINE L1 5481 6161 0 1932 112 7 7 chr17 67040822 67041098 -22463455 + AluSx SINE Alu 1 276 -36 2320 58 10 7 chr17 67041198 67041492 -22463061 - AluY SINE Alu -16 295 1 1440 202 52 0 chr17 67041496 67041783 -22462770 - AluJo SINE Alu -8 304 3 743 162 34 0 chr17 67041799 67041947 -22462606 + L1MB7 LINE L1 6032 6184 0 1971 222 57 13 chr17 67041947 67042474 -22462079 + HAL1 LINE L1 1145 1694 -813 2246 68 29 26 chr17 67042479 67042789 -22461764 + AluY SINE Alu 1 311 0 474 228 173 24 chr17 67042793 67043048 -22461505 - HAL1 LINE L1 -1357 1150 858 27 51 0 17 chr17 67043050 67043074 -22461479 + AT_rich Low_complexity Low_complexity 1 24 -34 1293 219 34 10 chr17 67043074 67043371 -22461182 - AluJo SINE Alu -8 304 1 27 51 0 17 chr17 67043371 67043405 -22461148 + AT_rich Low_complexity Low_complexity 24 58 0 2129 102 18 0 chr17 67043405 67043688 -22460865 - AluSp SINE Alu -25 288 1 1599 273 104 25 chr17 67043691 67044370 -22460183 - HAL1 LINE L1 -1671 836 26 1823 168 0 3 chr17 67044437 67044735 -22459818 - AluJo SINE Alu -15 297 1 1018 147 0 0 chr17 67044857 67045013 -22459540 + AluSg/x SINE Alu 146 301 -11 21 0 0 0 chr17 67045394 67045415 -22459138 + AT_rich Low_complexity Low_complexity 1 21 0 208 320 64 26 chr17 67046720 67046798 -22457755 - L2 LINE L2 -45 3227 3147 645 244 92 55 chr17 67046823 67047040 -22457513 - MIR SINE MIR -26 236 12 213 231 0 0 chr17 67048040 67048092 -22456461 + A-rich Low_complexity Low_complexity 2 53 0 207 119 24 24 chr17 67049422 67049464 -22455089 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1041 238 13 4 chr17 67049464 67049695 -22454858 + MIR SINE MIR 29 261 -1 2239 97 0 3 chr17 67049758 67050058 -22454495 - AluSx SINE Alu -13 299 1 554 263 21 53 chr17 67050098 67050288 -22454265 + L2 LINE L2 3124 3307 -6 2139 137 0 0 chr17 67050288 67050594 -22453959 + AluSx SINE Alu 1 306 -6 27 29 0 0 chr17 67050643 67050677 -22453876 + AT_rich Low_complexity Low_complexity 1 34 0 321 247 175 43 chr17 67051519 67051880 -22452673 + L1ME4a LINE L1 5405 5841 -280 725 183 0 8 chr17 67051880 67052011 -22452542 + FLAM_A SINE Alu 2 131 -2 321 247 175 43 chr17 67052011 67052098 -22452455 + L1ME4a LINE L1 5841 5915 -206 669 120 0 0 chr17 67052724 67052816 -22451737 - HY3 scRNA scRNA -9 92 1 398 296 56 0 chr17 67053933 67054041 -22450512 + MIR SINE MIR 47 160 -102 546 201 127 41 chr17 67054268 67054512 -22450041 + HAL1 LINE L1 814 1078 -1429 1903 148 7 10 chr17 67054518 67054821 -22449732 + AluJo SINE Alu 1 302 -10 912 218 148 106 chr17 67054840 67055096 -22449457 + HAL1 LINE L1 1581 1825 -682 1758 121 86 14 chr17 67055096 67055376 -22449177 - AluJb SINE Alu -12 300 1 912 218 148 106 chr17 67055376 67055904 -22448649 + HAL1 LINE L1 1825 2398 -109 854 201 6 12 chr17 67056049 67056218 -22448335 - MER5B DNA MER1_type -10 168 1 2208 105 0 3 chr17 67056918 67057212 -22447341 + AluSx SINE Alu 5 297 -15 1623 172 45 7 chr17 67057298 67057589 -22446964 + AluJo SINE Alu 6 307 -5 287 120 0 23 chr17 67057649 67057707 -22446846 - FLAM SINE Alu -2 131 82 243 0 0 0 chr17 67057707 67057734 -22446819 + (T)n Simple_repeat Simple_repeat 1 27 0 541 177 0 31 chr17 67057759 67057855 -22446698 - AluJ/FLAM SINE Alu -217 95 3 996 171 61 73 chr17 67058016 67058203 -22446350 + MER33 DNA MER1_type 1 184 -2401 1751 173 37 0 chr17 67058203 67058498 -22446055 + AluJb SINE Alu 1 306 -6 996 171 61 73 chr17 67058498 67058638 -22445915 + MER33 DNA MER1_type 184 324 0 2291 78 0 10 chr17 67058685 67058980 -22445573 - AluY SINE Alu -19 292 1 1787 151 4 0 chr17 67059105 67059377 -22445176 + AluJb SINE Alu 1 273 -39 306 238 83 0 chr17 67059392 67059476 -22445077 + polypurine Low_complexity Low_complexity 4 94 0 323 270 126 69 chr17 67059923 67059949 -22444604 + MER5A DNA MER1_type 1 24 -165 2201 111 7 0 chr17 67059949 67060246 -22444307 + AluSq SINE Alu 1 299 -14 323 270 126 69 chr17 67060246 67060393 -22444160 + MER5A DNA MER1_type 24 184 -5 2121 131 0 0 chr17 67061081 67061371 -22443182 + AluSx SINE Alu 1 290 -22 849 158 0 0 chr17 67061865 67061998 -22442555 + AluSq/x SINE Alu 1 133 -180 2126 125 10 3 chr17 67062106 67062417 -22442136 + AluSq SINE Alu 1 313 0 976 158 70 0 chr17 67062490 67062661 -22441892 + FRAM SINE Alu 1 176 0 2139 135 0 6 chr17 67062843 67063155 -22441398 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr17 67063181 67063204 -22441349 + AT_rich Low_complexity Low_complexity 1 23 0 337 228 0 0 chr17 67063221 67063300 -22441253 - MER116 DNA Mariner 0 80 2 2170 108 0 22 chr17 67064042 67064356 -22440197 - AluSq SINE Alu -6 307 1 2368 82 3 0 chr17 67064358 67064651 -22439902 - AluY SINE Alu -6 305 12 1813 152 42 0 chr17 67064693 67064976 -22439577 - AluSx SINE Alu -17 295 1 188 325 249 18 chr17 67065092 67065261 -22439292 + L2 LINE L2 2570 2777 -537 481 254 35 49 chr17 67065676 67065818 -22438735 + MIR SINE MIR 57 196 -66 2082 136 0 0 chr17 67065835 67066136 -22438417 + AluSx SINE Alu 1 301 -11 427 255 13 20 chr17 67066168 67066317 -22438236 + L1M4 LINE L1 4512 4659 -1487 2248 127 3 7 chr17 67066405 67066713 -22437840 + AluSx SINE Alu 1 307 -5 1761 139 15 4 chr17 67066738 67067012 -22437541 + AluJb SINE Alu 16 292 -20 387 60 0 0 chr17 67067178 67067228 -22437325 + (TG)n Simple_repeat Simple_repeat 1 50 0 435 197 33 82 chr17 67067228 67067350 -22437203 - FLAM_C SINE Alu -17 116 1 2243 97 13 3 chr17 67067378 67067686 -22436867 + AluY SINE Alu 1 311 0 249 338 15 0 chr17 67067870 67067938 -22436615 - L3 LINE CR1 -1474 103 35 2086 118 0 13 chr17 67068088 67068392 -22436161 - AluSx SINE Alu -12 300 1 1011 170 6 12 chr17 67068592 67068763 -22435790 - AluJb SINE Alu -22 290 121 271 290 56 17 chr17 67068791 67068927 -22435626 - MIR SINE MIR -67 141 34 1372 132 155 23 chr17 67069083 67069341 -22435212 + AluJo SINE Alu 1 292 -20 21 0 0 0 chr17 67069341 67069362 -22435191 + AT_rich Low_complexity Low_complexity 1 21 0 383 347 33 33 chr17 67069373 67069475 -22435078 - L2 LINE L2 -40 3232 3128 2226 102 7 10 chr17 67069475 67069779 -22434774 + AluSq SINE Alu 1 303 -10 383 347 33 33 chr17 67069779 67069797 -22434756 - L2 LINE L2 -143 3129 3112 2197 98 10 7 chr17 67069811 67070118 -22434435 + AluSx SINE Alu 1 308 -4 2050 119 13 13 chr17 67070848 67071150 -22433403 - AluSx SINE Alu -10 302 1 1392 149 32 5 chr17 67071427 67071648 -22432905 + AluJo SINE Alu 9 235 -77 180 97 0 0 chr17 67072496 67072527 -22432026 + (T)n Simple_repeat Simple_repeat 1 31 0 203 250 0 0 chr17 67075077 67075121 -22429432 + (CA)n Simple_repeat Simple_repeat 1 44 0 824 147 0 22 chr17 67077053 67077189 -22427364 - FLAM_C SINE Alu 0 133 1 568 115 0 0 chr17 67078503 67078581 -22425972 - AluS SINE Alu -233 79 2 655 179 0 0 chr17 67078661 67078784 -22425769 + Alu SINE Alu 1 123 -188 1871 96 4 0 chr17 67078890 67079130 -22425423 - AluSx SINE Alu -71 241 1 2209 117 3 0 chr17 67080072 67080370 -22424183 + AluSx SINE Alu 1 299 -13 1025 87 4 12 chr17 67080525 67080755 -22423798 + AluSx SINE Alu 1 310 -2 2246 80 0 58 chr17 67080755 67081066 -22423487 + AluSq SINE Alu 1 293 -20 1653 105 58 71 chr17 67082261 67082406 -22422147 + AluJo SINE Alu 9 150 -162 2294 89 3 29 chr17 67082406 67082720 -22421833 + AluSq SINE Alu 1 306 -7 1653 105 58 71 chr17 67082720 67082868 -22421685 + AluJo SINE Alu 150 298 -14 22 0 0 0 chr17 67082985 67083007 -22421546 + AT_rich Low_complexity Low_complexity 1 22 0 2104 133 3 0 chr17 67083157 67083451 -22421102 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr17 67083886 67083908 -22420645 + AT_rich Low_complexity Low_complexity 1 22 0 235 300 78 0 chr17 67083930 67084020 -22420533 + MIR SINE MIR 86 182 -80 1980 145 40 0 chr17 67084313 67084609 -22419944 + AluSx SINE Alu 1 308 -4 210 91 0 0 chr17 67085423 67085456 -22419097 + (TG)n Simple_repeat Simple_repeat 2 34 0 271 288 0 0 chr17 67085456 67085522 -22419031 + (CATATA)n Simple_repeat Simple_repeat 2 67 0 344 279 15 36 chr17 67085531 67085697 -22418856 + L1ME4a LINE L1 4964 5128 -1018 2395 82 3 0 chr17 67085704 67086007 -22418546 + AluY SINE Alu 1 304 -7 691 252 93 84 chr17 67086321 67086892 -22417661 + L1ME4a LINE L1 5293 5868 -253 1891 168 0 3 chr17 67088049 67088340 -22416213 - AluJb SINE Alu -22 290 1 2171 115 0 0 chr17 67088371 67088658 -22415895 - AluSq SINE Alu -26 287 1 281 311 16 49 chr17 67088848 67088970 -22415583 + MIR SINE MIR 3 120 -142 2337 81 10 7 chr17 67089000 67089297 -22415256 - AluSq SINE Alu -15 298 1 1533 189 28 17 chr17 67089528 67089819 -22414734 - AluJb SINE Alu -18 294 1 2136 111 17 7 chr17 67089977 67090275 -22414278 - AluSg SINE Alu -9 301 1 396 356 75 7 chr17 67090361 67090507 -22414046 + MIR3 SINE MIR 40 195 -13 428 132 0 0 chr17 67090537 67090605 -22413948 + Tigger4(Zombi) DNA MER2_type 2663 2730 -1 2273 92 0 3 chr17 67090678 67090971 -22413582 - AluSq SINE Alu -16 297 6 24 32 0 0 chr17 67091797 67091828 -22412725 + AT_rich Low_complexity Low_complexity 1 31 0 2342 81 14 0 chr17 67092190 67092485 -22412068 - AluY SINE Alu -12 299 1 23 0 0 0 chr17 67092633 67092656 -22411897 + AT_rich Low_complexity Low_complexity 1 23 0 1759 115 0 0 chr17 67092992 67093227 -22411326 - AluSg SINE Alu -75 235 1 329 306 12 0 chr17 67093506 67093591 -22410962 - L2 LINE L2 -5 3267 3182 2911 134 63 4 chr17 67093591 67094068 -22410485 + MLT1D LTR MaLR 1 505 0 1332 149 127 54 chr17 67094116 67094432 -22410121 - MER44D DNA MER2_type 0 609 1 2064 137 0 14 chr17 67094787 67095079 -22409474 + AluSx SINE Alu 1 288 -24 1898 184 58 60 chr17 67095150 67095654 -22408899 - MLT1D LTR MaLR 0 505 3 243 0 0 0 chr17 67096148 67096175 -22408378 + (A)n Simple_repeat Simple_repeat 1 27 0 1981 115 3 17 chr17 67096839 67097126 -22407427 - AluY SINE Alu -23 288 6 30 0 0 0 chr17 67097268 67097298 -22407255 + AT_rich Low_complexity Low_complexity 1 30 0 2167 103 21 0 chr17 67097346 67097636 -22406917 - AluSx SINE Alu -16 296 1 2399 81 0 0 chr17 67097644 67097941 -22406612 - AluSg SINE Alu -13 297 1 2502 58 0 0 chr17 67098163 67098457 -22406096 - AluY SINE Alu -17 294 1 2032 133 0 14 chr17 67098472 67098628 -22405925 - AluSx SINE Alu -23 289 137 2284 99 0 3 chr17 67098628 67098930 -22405623 - AluSc SINE Alu -8 301 1 2032 133 0 14 chr17 67098930 67099066 -22405487 - AluSx SINE Alu -175 137 1 673 246 72 29 chr17 67099079 67099286 -22405267 - MIR SINE MIR -13 249 34 2150 113 3 36 chr17 67099298 67099607 -22404946 - AluSq SINE Alu -14 299 1 2159 113 10 3 chr17 67100020 67100320 -22404233 - AluJb SINE Alu -10 302 1 1201 122 0 12 chr17 67100566 67100730 -22403823 - AluSq SINE Alu -17 296 135 23 0 0 0 chr17 67101052 67101075 -22403478 + AT_rich Low_complexity Low_complexity 1 23 0 2074 105 34 3 chr17 67101540 67101835 -22402718 + AluSx SINE Alu 1 304 -8 2377 89 0 0 chr17 67102299 67102601 -22401952 + AluSc SINE Alu 1 302 -7 206 225 0 0 chr17 67103500 67103540 -22401013 + A-rich Low_complexity Low_complexity 5 44 0 785 168 0 8 chr17 67103772 67103897 -22400656 - FLAM_C SINE Alu -9 124 1 453 261 70 0 chr17 67104248 67104363 -22400190 - MIR SINE MIR -111 151 29 318 352 101 13 chr17 67104366 67104525 -22400028 + L3 LINE CR1 1404 1576 -1 1899 128 32 4 chr17 67104582 67104863 -22399690 + AluJb SINE Alu 1 289 -23 2138 133 0 0 chr17 67104945 67105246 -22399307 + AluSx SINE Alu 1 301 -11 992 192 89 0 chr17 67106520 67106723 -22397830 - MER58A DNA MER1_type -1 223 3 536 217 40 7 chr17 67107438 67107590 -22396963 + MER103 DNA DNA 10 166 0 340 197 53 0 chr17 67107892 67107968 -22396585 - MIR3 SINE MIR -15 193 114 2283 63 3 3 chr17 67108605 67108916 -22395637 - AluY SINE Alu 0 311 1 257 192 0 0 chr17 67109039 67109091 -22395462 - Alu SINE Alu 0 302 251 1741 234 72 53 chr17 67109212 67109963 -22394590 + HAL1 LINE L1 1743 2507 0 981 180 6 22 chr17 67110009 67110187 -22394366 + FAM SINE Alu 1 175 0 1304 147 32 58 chr17 67110633 67110798 -22393755 - Tigger6 DNA MER2_type 0 1597 1429 1716 194 20 0 chr17 67110798 67111092 -22393461 - AluJb SINE Alu -12 300 1 1304 147 32 58 chr17 67111092 67111175 -22393378 - Tigger6 DNA MER2_type -168 1429 1356 1968 159 0 3 chr17 67111175 67111477 -22393076 - AluSg SINE Alu -9 301 1 1304 147 32 58 chr17 67111477 67111540 -22393013 - Tigger6 DNA MER2_type -241 1356 1293 2342 104 3 0 chr17 67111540 67111848 -22392705 - AluSp SINE Alu -4 309 1 1423 194 45 82 chr17 67111852 67111969 -22392584 - Tigger6 DNA MER2_type -1206 391 271 1216 148 30 38 chr17 67111969 67112206 -22392347 + MER46A DNA MER2_type 1 235 -1 1423 194 45 82 chr17 67112206 67112490 -22392063 - Tigger6 DNA MER2_type -1326 271 5 1851 75 124 50 chr17 67112554 67112836 -22391717 + AluSx SINE Alu 1 303 -9 358 339 62 42 chr17 67113786 67113978 -22390575 + MIR SINE MIR 5 200 -62 2324 98 0 3 chr17 67113984 67114280 -22390273 + AluSx SINE Alu 1 295 -17 271 234 117 32 chr17 67114314 67114408 -22390145 + L2 LINE L2 3171 3272 0 241 274 0 0 chr17 67114583 67114634 -22389919 + MIR SINE MIR 199 249 -13 277 134 3 31 chr17 67114883 67114967 -22389586 + L1MB4 LINE L1 5718 5804 -365 2340 78 3 0 chr17 67114967 67115260 -22389293 - AluSc SINE Alu -15 294 1 2093 131 28 8 chr17 67115265 67115624 -22388929 - L1PB4 LINE L1 -2 6154 5789 435 163 0 0 chr17 67115624 67115704 -22388849 + (TG)n Simple_repeat Simple_repeat 2 81 0 940 169 77 0 chr17 67115704 67115887 -22388666 - L1MB4 LINE L1 -364 5792 5596 2181 111 25 43 chr17 67115887 67116158 -22388395 + L1MB4 LINE L1 5790 6053 -127 2052 117 13 10 chr17 67116158 67116457 -22388096 + AluSx SINE Alu 1 300 -12 2181 111 25 43 chr17 67116457 67116582 -22387971 + L1MB4 LINE L1 6053 6179 -1 24 0 0 0 chr17 67116598 67116622 -22387931 + AT_rich Low_complexity Low_complexity 1 24 0 452 197 134 14 chr17 67116642 67116784 -22387769 + Charlie1 DNA MER1_type 1 159 -2602 * 1003 149 27 103 chr17 67116782 67116937 -22387616 + Charlie1 DNA MER1_type 2457 2575 -186 950 213 0 0 chr17 67116937 67117101 -22387452 - FAM SINE Alu -7 168 5 1003 149 27 103 chr17 67117101 67117274 -22387279 + Charlie1 DNA MER1_type 2575 2760 -1 709 255 114 80 chr17 67117969 67118162 -22386391 + L1MEc LINE L1 1089 1274 -5122 1958 94 3 81 chr17 67118162 67118470 -22386083 + AluSq SINE Alu 1 284 -29 183 42 0 0 chr17 67118470 67118494 -22386059 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 709 255 114 80 chr17 67118494 67118641 -22385912 + L1MEc LINE L1 1274 1415 -4981 2212 122 0 0 chr17 67118641 67118936 -22385617 + AluSg SINE Alu 1 295 -15 709 255 114 80 chr17 67118936 67118955 -22385598 + L1MEc LINE L1 1415 1432 -4964 1723 123 0 12 chr17 67118955 67119208 -22385345 + AluSx SINE Alu 55 304 -8 709 255 114 80 chr17 67119208 67119323 -22385230 + L1MEc LINE L1 1432 1542 -4854 706 175 7 51 chr17 67119323 67119460 -22385093 - FLAM_C SINE Alu -2 131 1 709 255 114 80 chr17 67119460 67119832 -22384721 + L1MEc LINE L1 1542 1968 -4428 599 242 68 40 chr17 67119812 67120134 -22384419 + L1MEc LINE L1 2180 2510 -3886 * 1478 167 7 51 chr17 67120135 67120264 -22384289 + AluJb SINE Alu 17 150 -162 2385 65 0 13 chr17 67120264 67120570 -22383983 + AluY SINE Alu 2 303 -8 1478 167 7 51 chr17 67120570 67120734 -22383819 + AluJb SINE Alu 150 297 -15 2090 129 0 3 chr17 67120767 67120902 -22383651 + AluSx SINE Alu 1 135 -177 2242 82 0 0 chr17 67120902 67121225 -22383328 + AluY SINE Alu 1 323 0 2090 129 0 3 chr17 67121225 67121382 -22383171 + AluSx SINE Alu 135 293 -19 2186 57 43 43 chr17 67121384 67121685 -22382868 + AluY SINE Alu 3 303 -8 5471 147 24 25 chr17 67121692 67121998 -22382555 + L1PA16 LINE L1 4490 4795 -1371 2037 98 4 0 chr17 67121998 67122264 -22382289 + AluY SINE Alu 1 267 -44 5471 147 24 25 chr17 67122264 67123631 -22380922 + L1PA16 LINE L1 4795 6153 -13 903 208 0 5 chr17 67123762 67123978 -22380575 + L1MEc LINE L1 2455 2669 -3546 276 311 76 23 chr17 67124051 67124091 -22380462 - MIR SINE MIR -106 156 120 2115 128 3 0 chr17 67124091 67124387 -22380166 - AluSx SINE Alu -15 297 1 276 311 76 23 chr17 67124387 67124478 -22380075 - MIR SINE MIR -142 120 18 2401 87 0 0 chr17 67124769 67125068 -22379485 - AluSg SINE Alu -11 299 1 957 176 6 6 chr17 67125394 67125553 -22379000 - AluJo SINE Alu -151 161 3 1050 186 0 0 chr17 67125574 67125741 -22378812 - FRAM SINE Alu -12 164 1 356 167 226 0 chr17 67125832 67125934 -22378619 - MER3 DNA MER1_type -4 205 81 1924 150 0 3 chr17 67126026 67126319 -22378234 - AluSx SINE Alu -12 300 9 300 215 51 13 chr17 67126365 67126444 -22378109 - L1ME4a LINE L1 -33 6088 6007 913 142 22 0 chr17 67126462 67126596 -22377957 + FRAM SINE Alu 20 156 -20 316 274 25 65 chr17 67126635 67126836 -22377717 - L1ME4a LINE L1 -186 5935 5743 2359 100 10 0 chr17 67127431 67127740 -22376813 + AluSx SINE Alu 1 312 0 387 0 0 0 chr17 67127754 67127797 -22376756 + (TA)n Simple_repeat Simple_repeat 1 43 0 2368 94 7 0 chr17 67128046 67128353 -22376200 + AluSq SINE Alu 1 309 -4 2619 55 0 0 chr17 67128446 67128753 -22375800 + AluY SINE Alu 1 307 -4 2216 109 0 32 chr17 67129527 67129838 -22374715 + AluSq SINE Alu 1 301 -12 2236 111 7 0 chr17 67130289 67130595 -22373958 + AluSg SINE Alu 1 308 -2 2437 76 0 3 chr17 67130733 67131034 -22373519 + AluSq SINE Alu 1 300 -13 490 302 6 41 chr17 67131869 67132038 -22372515 - MIR3 SINE MIR -37 171 9 181 352 0 42 chr17 67133313 67133384 -22371169 - L3b LINE CR1 -3 1580 1513 267 295 0 0 chr17 67133652 67133713 -22370840 - L2 LINE L2 -9 3263 3203 1889 130 0 20 chr17 67133766 67133903 -22370650 + AluSx SINE Alu 1 139 -173 2432 88 7 0 chr17 67133903 67134208 -22370345 + AluSp SINE Alu 1 307 -6 1889 130 0 20 chr17 67134208 67134363 -22370190 + AluSx SINE Alu 139 287 -25 255 200 75 25 chr17 67134423 67134503 -22370050 + MER112 DNA MER1_type 1 84 -176 263 206 0 44 chr17 67134638 67134706 -22369847 + MER112 DNA MER1_type 175 239 -21 394 197 254 0 chr17 67134741 67134863 -22369690 - MIR SINE MIR -13 249 97 224 298 70 0 chr17 67134940 67134997 -22369556 + L3 LINE CR1 1514 1574 -3 199 236 136 27 chr17 67135104 67135214 -22369339 + L2 LINE L2 2361 2482 -832 1095 154 0 6 chr17 67135275 67135437 -22369116 - AluSg/x SINE Alu -18 294 134 2325 96 0 3 chr17 67135437 67135739 -22368814 - AluSx SINE Alu -11 301 1 1451 191 41 27 chr17 67135743 67136037 -22368516 - AluJb SINE Alu -14 298 1 194 130 43 43 chr17 67136258 67136304 -22368249 - L3b LINE CR1 -8 1575 1530 2288 92 0 0 chr17 67136366 67136648 -22367905 + AluSg SINE Alu 5 286 -24 370 290 28 0 chr17 67136729 67136836 -22367717 - L3 LINE CR1 -907 670 561 2054 120 0 10 chr17 67136951 67137243 -22367310 - AluSx SINE Alu -23 289 1 2086 138 7 0 chr17 67137368 67137665 -22366888 - AluSx SINE Alu -11 301 3 341 235 193 0 chr17 67137677 67137796 -22366757 + L1MC4a LINE L1 5261 5402 -2406 895 241 60 12 chr17 67137815 67138064 -22366489 - MIR SINE MIR 0 262 2 253 173 135 0 chr17 67138105 67138157 -22366396 + L1MC4a LINE L1 5498 5556 -2252 1991 154 7 3 chr17 67138164 67138469 -22366084 + AluSx SINE Alu 1 306 -6 1632 186 21 0 chr17 67138528 67138813 -22365740 + AluJb SINE Alu 21 311 -1 360 313 56 7 chr17 67138861 67139005 -22365548 + L1MC4a LINE L1 5713 5863 -1945 1980 98 6 80 chr17 67139041 67139366 -22365187 - AluSp SINE Alu -12 301 1 1986 138 0 0 chr17 67139418 67139709 -22364844 + AluSx SINE Alu 1 291 -21 225 0 0 0 chr17 67139715 67139740 -22364813 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 2118 137 0 13 chr17 67141465 67141778 -22362775 + AluSx SINE Alu 1 309 -3 1588 189 27 20 chr17 67141891 67142188 -22362365 + AluJb SINE Alu 1 299 -13 604 113 57 64 chr17 67142196 67142337 -22362216 + L1PA15 LINE L1 6022 6161 -4 1737 167 61 91 chr17 67142360 67142787 -22361766 + L1MB8 LINE L1 4799 5176 -1002 747 189 0 8 chr17 67142787 67142919 -22361634 + FLAM_A SINE Alu 1 131 -2 1737 167 61 91 chr17 67142919 67143332 -22361221 + L1MB8 LINE L1 5176 5600 -578 1031 168 0 12 chr17 67143332 67143499 -22361054 + AluSg/x SINE Alu 131 295 -17 2425 95 0 0 chr17 67143499 67143804 -22360749 + AluSq SINE Alu 1 305 -8 2276 166 78 18 chr17 67143815 67144316 -22360237 + L1MB8 LINE L1 5616 6146 -32 2447 71 7 0 chr17 67144418 67144727 -22359826 + AluY SINE Alu 1 311 0 450 288 225 38 chr17 67144838 67145154 -22359399 - L2 LINE L2 -25 3288 2914 2259 73 11 0 chr17 67145227 67145513 -22359040 - AluY SINE Alu -22 289 1 530 155 0 0 chr17 67145572 67145656 -22358897 - AluJ/FLAM SINE Alu -228 84 1 480 129 12 12 chr17 67145917 67146002 -22358551 - AluSp/q SINE Alu -14 299 215 1626 131 0 4 chr17 67146010 67146246 -22358307 - AluSq SINE Alu -7 306 72 333 102 0 34 chr17 67146246 67146305 -22358248 + AluS SINE Alu 11 67 -236 636 179 72 126 chr17 67146308 67146515 -22358038 - MIR SINE MIR -62 200 5 1740 171 11 0 chr17 67147081 67147361 -22357192 - AluJb SINE Alu -17 295 13 2035 269 184 37 chr17 67147408 67147672 -22356881 + L2 LINE L2 1691 1915 -1398 2231 92 7 7 chr17 67147672 67147978 -22356575 + AluSx SINE Alu 1 306 -6 2035 269 184 37 chr17 67147978 67148535 -22356018 + L2 LINE L2 1915 2389 -924 1556 153 67 0 chr17 67148535 67148790 -22355763 - AluSg SINE Alu -38 272 1 2187 118 3 3 chr17 67148791 67149088 -22355465 - AluSq SINE Alu -16 297 1 2035 269 184 37 chr17 67149088 67149676 -22354877 + L2 LINE L2 2388 3313 0 2006 142 10 0 chr17 67151498 67151794 -22352759 - AluSx SINE Alu -13 299 1 1986 139 17 10 chr17 67153158 67153460 -22351093 + AluSx SINE Alu 1 304 -8 228 214 0 0 chr17 67153999 67154055 -22350498 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 0 0 0 chr17 67154705 67154729 -22349824 + AT_rich Low_complexity Low_complexity 1 24 0 2128 107 0 0 chr17 67154939 67155228 -22349325 + AluSg1 SINE Alu 19 307 -2 307 304 110 84 chr17 67156096 67156210 -22348343 - MIR SINE MIR 0 262 152 2062 118 7 7 chr17 67156210 67156497 -22348056 - AluSc SINE Alu -22 287 1 307 304 110 84 chr17 67156497 67156619 -22347934 - MIR SINE MIR -110 152 20 1723 128 0 0 chr17 67156622 67156864 -22347689 - AluSg/x SINE Alu 0 310 69 192 97 0 0 chr17 67156990 67157021 -22347532 + (TA)n Simple_repeat Simple_repeat 1 31 0 2027 140 0 0 chr17 67157021 67157306 -22347247 - AluSx SINE Alu -27 285 1 291 163 0 0 chr17 67157309 67157358 -22347195 + MER3 DNA MER1_type 80 128 -81 556 213 121 35 chr17 67157358 67157499 -22347054 - FRAM SINE Alu -24 152 1 353 128 32 64 chr17 67157499 67157593 -22346960 + MER3 DNA MER1_type 119 209 0 479 275 95 44 chr17 67157593 67157998 -22346555 + L1MC5 LINE L1 7330 7775 -186 268 277 103 0 chr17 67158032 67158187 -22346366 + L1MC4a LINE L1 5768 5938 -1870 1132 118 12 18 chr17 67158264 67158434 -22346119 - AluSg/x SINE Alu -14 296 128 376 148 9 37 chr17 67158434 67158542 -22346011 + (TA)n Simple_repeat Simple_repeat 2 106 0 1637 181 34 7 chr17 67158972 67159264 -22345289 - AluJb SINE Alu -12 300 1 461 256 51 8 chr17 67159296 67159413 -22345140 + MIR SINE MIR 3 124 -138 1208 168 78 7 chr17 67159970 67160237 -22344316 - L1MA8 LINE L1 -65 6226 5949 2350 85 3 0 chr17 67160237 67160532 -22344021 - AluY SINE Alu -15 296 1 1208 168 78 7 chr17 67160532 67160551 -22344002 - L1MA8 LINE L1 -342 5949 5933 2045 122 14 0 chr17 67160581 67160860 -22343693 - AluSq SINE Alu -30 283 1 639 250 0 0 chr17 67160869 67160993 -22343560 - FLAM_C SINE Alu -19 124 1 1022 174 0 0 chr17 67160993 67161177 -22343376 - L1 LINE L1 -1398 4748 4565 674 132 89 45 chr17 67161362 67161547 -22343006 + L1MA8 LINE L1 6065 6171 -18 219 256 0 39 chr17 67161758 67161836 -22342717 + (TA)n Simple_repeat Simple_repeat 1 75 0 216 0 0 0 chr17 67161850 67161874 -22342679 + (TA)n Simple_repeat Simple_repeat 1 24 0 377 69 0 0 chr17 67161886 67161944 -22342609 + L1MA8 LINE L1 6231 6288 -3 376 205 64 0 chr17 67162041 67162119 -22342434 + L2 LINE L2 3187 3269 -3 190 175 158 18 chr17 67162204 67162261 -22342292 - MIR3 SINE MIR -21 187 123 1944 128 55 0 chr17 67162335 67162625 -22341928 - AluSx SINE Alu -6 306 1 1578 116 0 37 chr17 67162628 67162731 -22341822 - AluSx SINE Alu -78 234 129 2178 79 4 7 chr17 67162731 67163030 -22341523 - AluSc SINE Alu 0 298 1 1578 116 0 37 chr17 67163030 67163166 -22341387 - AluSx SINE Alu -183 129 3 274 206 11 43 chr17 67163939 67164031 -22340522 + HAL1 LINE L1 2244 2332 -175 690 118 18 18 chr17 67164055 67164165 -22340388 + HY1 scRNA scRNA 1 110 -2 1766 134 32 35 chr17 67164199 67164512 -22340041 + AluSx SINE Alu 1 312 0 2357 98 0 7 chr17 67164605 67164912 -22339641 + AluSx SINE Alu 1 305 -7 2071 137 0 3 chr17 67164915 67165208 -22339345 + AluSx SINE Alu 21 312 0 1191 181 16 44 chr17 67165351 67165599 -22338954 + AluJo SINE Alu 17 257 -55 52 58 0 0 chr17 67165645 67165732 -22338821 + AT_rich Low_complexity Low_complexity 1 87 0 1399 177 57 57 chr17 67165898 67166198 -22338355 - AluJo SINE Alu -12 300 1 1972 122 4 11 chr17 67166528 67166806 -22337747 - AluSq SINE Alu -37 276 1 2178 97 10 23 chr17 67166810 67167120 -22337433 - AluSq SINE Alu -7 306 1 930 200 0 6 chr17 67167125 67167290 -22337263 - FAM SINE Alu -8 167 4 266 323 32 11 chr17 67167817 67167910 -22336643 - MIR SINE MIR -118 144 50 2663 163 12 6 chr17 67167925 67168441 -22336112 + L1MB4 LINE L1 5311 5829 -351 1995 140 3 0 chr17 67168555 67168847 -22335706 - AluSg SINE Alu -17 293 1 2280 97 0 3 chr17 67169259 67169559 -22334994 - AluSx SINE Alu -11 301 3 27 0 0 0 chr17 67169920 67169947 -22334606 + AT_rich Low_complexity Low_complexity 1 27 0 282 352 72 8 chr17 67170006 67170131 -22334422 - MIR3 SINE MIR -38 170 38 242 252 139 33 chr17 67170619 67170770 -22333783 + HAL1 LINE L1 120 286 -2221 1143 276 130 32 chr17 67170930 67171479 -22333074 + L2 LINE L2 2710 3312 -1 220 286 122 48 chr17 67172074 67172221 -22332332 - MIR SINE MIR -46 216 59 22 0 0 0 chr17 67172595 67172617 -22331936 + AT_rich Low_complexity Low_complexity 1 22 0 2012 152 10 0 chr17 67173148 67173450 -22331103 - AluJb SINE Alu -7 305 1 216 0 0 0 chr17 67173477 67173501 -22331052 + (T)n Simple_repeat Simple_repeat 1 24 0 734 148 0 67 chr17 67174326 67174461 -22330092 + FLAM_C SINE Alu 1 126 -7 306 0 0 0 chr17 67174570 67174604 -22329949 + (TA)n Simple_repeat Simple_repeat 1 34 0 946 125 7 14 chr17 67174609 67174753 -22329800 - FLAM_C SINE Alu 0 143 1 282 208 139 0 chr17 67174874 67174946 -22329607 - AluJ/FRAM SINE Alu -5 297 216 250 179 0 36 chr17 67174922 67174978 -22329575 - FLAM_A SINE Alu -69 63 10 * 399 342 0 26 chr17 67174996 67175151 -22329402 - L3 LINE CR1 -113 1464 1314 751 197 52 24 chr17 67175163 67175376 -22329177 + MER33 DNA MER1_type 1 219 -105 2158 103 0 7 chr17 67175377 67175667 -22328886 + AluSx SINE Alu 1 288 -24 203 0 0 36 chr17 67175681 67175709 -22328844 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 2126 198 70 69 chr17 67176136 67176879 -22327674 + Charlie1a DNA MER1_type 10 753 -702 864 187 34 43 chr17 67176993 67177073 -22327480 - MER2 DNA MER2_type -135 210 131 1911 142 0 36 chr17 67177073 67177382 -22327171 + AluSx SINE Alu 1 298 -14 864 187 34 43 chr17 67177382 67177510 -22327043 - MER2 DNA MER2_type -214 131 4 2331 166 158 13 chr17 67177513 67178120 -22326433 + Charlie1a DNA MER1_type 755 1449 -6 2374 87 0 7 chr17 67178385 67178694 -22325859 - AluY SINE Alu -4 307 1 254 152 89 38 chr17 67178912 67178991 -22325562 - L1ME3 LINE L1 -3 6159 6077 2229 87 7 13 chr17 67179030 67179329 -22325224 - AluSc SINE Alu -12 297 1 6763 39 3 25 chr17 67179338 67180185 -22324368 - SVA Other Other 0 1386 558 1906 160 7 3 chr17 67180537 67180825 -22323728 + AluSx SINE Alu 3 291 -21 198 0 0 0 chr17 67180825 67180847 -22323706 + (TA)n Simple_repeat Simple_repeat 2 23 0 299 330 102 0 chr17 67180869 67180987 -22323566 + L2 LINE L2 3182 3311 -2 308 191 0 56 chr17 67181026 67181115 -22323438 + L1MC/D LINE L1 5719 5802 -2006 687 181 0 30 chr17 67181122 67181255 -22323298 - FLAM_C SINE Alu 0 133 5 1347 143 100 0 chr17 67181355 67181585 -22322968 - 7SLRNA srpRNA srpRNA -14 306 54 346 94 0 19 chr17 67181843 67181896 -22322657 + MER66B LTR ERV1 295 346 -140 261 302 0 23 chr17 67181896 67181982 -22322571 + GA-rich Low_complexity Low_complexity 3 86 0 2227 107 0 13 chr17 67182265 67182563 -22321990 + AluSx SINE Alu 1 294 -18 2131 123 0 0 chr17 67182584 67182885 -22321668 + AluY SINE Alu 1 301 -10 2482 63 0 0 chr17 67183191 67183494 -22321059 + AluY SINE Alu 1 303 -8 1169 108 12 0 chr17 67183494 67183660 -22320893 + AluY SINE Alu 133 300 -11 2438 62 3 7 chr17 67183660 67183968 -22320585 + AluY SINE Alu 1 307 -4 388 251 98 95 chr17 67183976 67184375 -22320178 + HAL1 LINE L1 1343 1742 -765 319 313 61 35 chr17 67185024 67185538 -22319015 + L1ME LINE L1 5318 5849 -321 2189 107 17 0 chr17 67185564 67185855 -22318698 + AluSx SINE Alu 1 296 -16 186 214 18 36 chr17 67187342 67187398 -22317155 + MER5A DNA MER1_type 42 96 -93 2295 103 3 0 chr17 67187559 67187870 -22316683 + AluSx SINE Alu 1 312 0 369 186 0 0 chr17 67188020 67188090 -22316463 + AluJ/FRAM SINE Alu 233 302 0 2338 101 0 3 chr17 67188754 67189062 -22315491 - AluSg SINE Alu -3 307 1 2391 83 3 0 chr17 67190208 67190510 -22314043 + AluSq SINE Alu 1 303 -10 927 178 38 70 chr17 67190891 67191104 -22313449 - MER20 DNA MER1_type -12 207 2 2171 112 26 3 chr17 67191324 67191629 -22312924 + AluSq SINE Alu 1 312 -1 847 280 132 54 chr17 67192164 67192833 -22311720 - L2 LINE L2 -5 3308 2583 1418 78 31 5 chr17 67192898 67193091 -22311462 - AluSg/x SINE Alu -10 300 103 1935 144 21 0 chr17 67193216 67193500 -22311053 + AluJo SINE Alu 1 290 -22 923 246 122 53 chr17 67193809 67194187 -22310366 - LTR33A LTR ERVL -110 413 10 2220 116 0 0 chr17 67194512 67194804 -22309749 - AluSx SINE Alu -18 294 3 3603 101 22 7 chr17 67195024 67195569 -22308984 - L1PA14 LINE L1 0 6161 5609 1302 226 45 39 chr17 67195613 67195874 -22308679 - MER58B DNA MER1_type -2079 341 76 1946 127 34 14 chr17 67195874 67196165 -22308388 + AluSx SINE Alu 1 297 -15 1302 226 45 39 chr17 67196165 67196240 -22308313 - MER58B DNA MER1_type -2344 76 3 21 36 0 0 chr17 67196956 67196984 -22307569 + AT_rich Low_complexity Low_complexity 1 28 0 6517 181 44 2 chr17 67196992 67199051 -22305502 + L1PA14 LINE L1 4051 6161 0 1893 77 0 16 chr17 67199107 67199354 -22305199 + AluY SINE Alu 60 302 -9 1385 174 76 51 chr17 67199364 67199639 -22304914 + AluJo SINE Alu 1 282 -30 721 231 82 43 chr17 67201580 67201861 -22302692 + L1MC4 LINE L1 7749 8040 -2 22 56 0 0 chr17 67202222 67202258 -22302295 + AT_rich Low_complexity Low_complexity 1 36 0 204 125 0 0 chr17 67202274 67202306 -22302247 + (T)n Simple_repeat Simple_repeat 1 32 0 2218 117 0 10 chr17 67202680 67202988 -22301565 + AluSx SINE Alu 1 305 -7 424 254 109 57 chr17 67203144 67203337 -22301216 + MLT1I LTR MaLR 99 301 -108 2080 126 0 10 chr17 67203356 67203658 -22300895 + AluSx SINE Alu 1 299 -13 31 0 0 0 chr17 67203658 67203689 -22300864 + AT_rich Low_complexity Low_complexity 1 31 0 501 296 35 65 chr17 67203884 67204222 -22300331 + MLT1I LTR MaLR 65 392 -17 2272 102 3 10 chr17 67204691 67204995 -22299558 + AluSx SINE Alu 1 302 -10 2127 113 3 22 chr17 67205321 67205639 -22298914 + AluSx SINE Alu 1 312 0 2126 198 70 69 chr17 67406814 67407557 -22096996 + Charlie1a DNA MER1_type 10 753 -702 864 187 34 43 chr17 67407671 67407751 -22096802 - MER2 DNA MER2_type -135 210 131 1911 142 0 36 chr17 67407751 67408060 -22096493 + AluSx SINE Alu 1 298 -14 864 187 34 43 chr17 67408060 67408188 -22096365 - MER2 DNA MER2_type -214 131 4 2331 166 158 13 chr17 67408191 67408798 -22095755 + Charlie1a DNA MER1_type 755 1449 -6 2374 87 0 7 chr17 67409063 67409372 -22095181 - AluY SINE Alu -4 307 1 254 152 89 38 chr17 67409590 67409669 -22094884 - L1ME3 LINE L1 -3 6159 6077 2229 87 7 13 chr17 67409708 67410007 -22094546 - AluSc SINE Alu -12 297 1 6762 39 3 25 chr17 67410016 67410863 -22093690 - SVA Other Other 0 1386 558 1915 159 7 3 chr17 67411215 67411504 -22093049 + AluSx SINE Alu 3 292 -20 180 0 0 0 chr17 67411504 67411524 -22093029 + (TA)n Simple_repeat Simple_repeat 2 21 0 299 330 102 0 chr17 67411546 67411664 -22092889 + L2 LINE L2 3182 3311 -2 296 229 26 94 chr17 67411703 67411799 -22092754 + L1MC4a LINE L1 5719 5797 -2011 712 183 0 29 chr17 67411799 67411936 -22092617 - FLAM_C SINE Alu 0 133 1 296 229 26 94 chr17 67411936 67412031 -22092522 + L1MC4a LINE L1 5797 5897 -1911 1966 141 21 0 chr17 67412055 67412339 -22092214 + AluJo SINE Alu 1 290 -22 923 246 122 53 chr17 67412648 67413026 -22091527 - LTR33A LTR ERVL -110 413 10 2220 116 0 0 chr17 67413351 67413643 -22090910 - AluSx SINE Alu -18 294 3 3603 101 22 7 chr17 67413863 67414408 -22090145 - L1PA14 LINE L1 0 6161 5609 1302 226 45 39 chr17 67414452 67414713 -22089840 - MER58B DNA MER1_type -2079 341 76 1946 127 34 14 chr17 67414713 67415004 -22089549 + AluSx SINE Alu 1 297 -15 1302 226 45 39 chr17 67415004 67415079 -22089474 - MER58B DNA MER1_type -2344 76 3 6517 181 44 2 chr17 67415830 67417889 -22086664 + L1PA14 LINE L1 4051 6161 0 1893 77 0 16 chr17 67417945 67418192 -22086361 + AluY SINE Alu 60 302 -9 1385 174 76 51 chr17 67418202 67418477 -22086076 + AluJo SINE Alu 1 282 -30 721 231 82 43 chr17 67420418 67420699 -22083854 + L1MC4 LINE L1 7749 8040 -2 22 56 0 0 chr17 67421060 67421096 -22083457 + AT_rich Low_complexity Low_complexity 1 36 0 204 125 0 0 chr17 67421112 67421144 -22083409 + (T)n Simple_repeat Simple_repeat 1 32 0 2218 117 0 10 chr17 67421518 67421826 -22082727 + AluSx SINE Alu 1 305 -7 424 254 109 57 chr17 67421982 67422175 -22082378 + MLT1I LTR MaLR 99 301 -108 2080 126 0 10 chr17 67422194 67422496 -22082057 + AluSx SINE Alu 1 299 -13 31 0 0 0 chr17 67422496 67422527 -22082026 + AT_rich Low_complexity Low_complexity 1 31 0 501 296 35 65 chr17 67422722 67423060 -22081493 + MLT1I LTR MaLR 65 392 -17 2263 102 3 10 chr17 67423529 67423832 -22080721 + AluSx SINE Alu 1 301 -11 2127 113 3 22 chr17 67424158 67424476 -22080077 + AluSx SINE Alu 1 312 0 688 166 7 50 chr17 67425275 67425414 -22079139 - FLAM_A SINE Alu 0 133 1 22 56 0 0 chr17 67425416 67425452 -22079101 + AT_rich Low_complexity Low_complexity 1 36 0 274 206 11 43 chr17 67426043 67426135 -22078418 + HAL1 LINE L1 2244 2332 -175 690 118 18 18 chr17 67426159 67426269 -22078284 + HY1 scRNA scRNA 1 110 -2 1766 134 32 35 chr17 67426303 67426616 -22077937 + AluSx SINE Alu 1 312 0 2357 98 0 7 chr17 67426709 67427016 -22077537 + AluSx SINE Alu 1 305 -7 2097 133 0 3 chr17 67427019 67427312 -22077241 + AluSx SINE Alu 21 312 0 1224 173 16 44 chr17 67427455 67427703 -22076850 + AluJo SINE Alu 17 257 -55 52 58 0 0 chr17 67427749 67427836 -22076717 + AT_rich Low_complexity Low_complexity 1 87 0 1399 177 57 57 chr17 67428002 67428302 -22076251 - AluJo SINE Alu -12 300 1 1972 122 4 11 chr17 67428632 67428910 -22075643 - AluSq SINE Alu -37 276 1 2178 97 10 23 chr17 67428914 67429224 -22075329 - AluSq SINE Alu -7 306 1 930 200 0 6 chr17 67429229 67429394 -22075159 - FAM SINE Alu -8 167 4 266 323 32 11 chr17 67429921 67430014 -22074539 - MIR SINE MIR -118 144 50 4064 167 29 20 chr17 67430029 67430890 -22073663 + L1MB4 LINE L1 5311 6179 -1 1944 158 0 20 chr17 67430905 67431209 -22073344 - AluJo SINE Alu -14 298 1 396 230 259 22 chr17 67431259 67431398 -22073155 + MER5B DNA MER1_type 6 177 -1 2332 110 0 0 chr17 67431608 67431916 -22072637 + AluSc SINE Alu 1 308 -1 194 275 0 0 chr17 67432107 67432147 -22072406 + MIR SINE MIR 62 101 -161 194 0 0 37 chr17 67432188 67432194 -22072359 + (GAAA)n Simple_repeat Simple_repeat 3 8 -20 1844 174 3 22 chr17 67432194 67432511 -22072042 + AluJb SINE Alu 1 311 -1 194 0 0 37 chr17 67432511 67432531 -22072022 + (GAAA)n Simple_repeat Simple_repeat 8 28 0 1042 210 47 38 chr17 67432954 67433273 -22071280 + MER33 DNA MER1_type 1 322 -2 367 188 0 0 chr17 67433659 67433723 -22070830 + MER3 DNA MER1_type 17 80 -129 221 232 72 0 chr17 67433916 67433985 -22070568 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 2265 101 3 0 chr17 67434000 67434288 -22070265 - AluSq SINE Alu -24 289 1 951 156 6 36 chr17 67434699 67434866 -22069687 + FRAM SINE Alu 1 159 -17 1661 189 14 7 chr17 67435884 67436175 -22068378 + AluJb SINE Alu 1 293 -19 967 172 15 71 chr17 67436188 67436386 -22068167 - AluJo SINE Alu -18 294 108 2587 77 3 25 chr17 67436389 67436415 -22068138 + L1PA8 LINE L1 5805 5830 -342 2270 112 0 0 chr17 67436415 67436711 -22067842 + AluSx SINE Alu 1 296 -16 2587 77 3 25 chr17 67436711 67437075 -22067478 + L1PA8 LINE L1 5830 6172 0 595 118 29 10 chr17 67437101 67437203 -22067350 - AluJo SINE Alu -195 117 14 528 93 0 0 chr17 67437335 67437410 -22067143 + (TA)n Simple_repeat Simple_repeat 2 76 0 2080 128 23 0 chr17 67437450 67437754 -22066799 + AluSx SINE Alu 1 311 -1 668 272 68 54 chr17 67437832 67438200 -22066353 + HAL1 LINE L1 445 817 -1690 360 274 77 109 chr17 67438200 67438678 -22065875 + HAL1 LINE L1 1552 2014 -493 676 185 58 79 chr17 67438679 67438868 -22065685 - MER58A DNA MER1_type 0 224 40 462 211 57 77 chr17 67438896 67438976 -22065577 + HAL1 LINE L1 2008 2088 -419 2443 61 3 0 chr17 67438976 67439273 -22065280 + AluY SINE Alu 1 298 -13 462 211 57 77 chr17 67439273 67439401 -22065152 + HAL1 LINE L1 2088 2212 -295 2273 122 3 0 chr17 67439403 67439707 -22064846 + AluSq SINE Alu 1 305 -8 225 216 137 74 chr17 67439837 67440027 -22064526 + HAL1 LINE L1 2273 2474 -33 2220 117 0 3 chr17 67440048 67440347 -22064206 + AluSx SINE Alu 1 298 -14 241 229 0 0 chr17 67440351 67440399 -22064154 + MLT1L LTR MaLR 1 48 -567 307 325 86 19 chr17 67440575 67440843 -22063710 + MLT1J LTR MaLR 226 511 0 30 0 0 0 chr17 67443315 67443345 -22061208 + AT_rich Low_complexity Low_complexity 1 30 0 2065 123 27 0 chr17 67443351 67443651 -22060902 + AluSx SINE Alu 1 308 -4 1964 152 17 0 chr17 67444439 67444735 -22059818 + AluSx SINE Alu 1 301 -11 2173 116 7 0 chr17 67444867 67445161 -22059392 + AluSx SINE Alu 1 296 -16 1223 205 50 34 chr17 67445807 67446105 -22058448 + AluJo SINE Alu 1 303 -9 2287 103 0 22 chr17 67447558 67447877 -22056676 + AluSx SINE Alu 1 312 0 1035 155 32 14 chr17 67448339 67448558 -22055995 + L1MC3 LINE L1 7423 7645 -140 2242 103 0 3 chr17 67449336 67449628 -22054925 + AluSx SINE Alu 1 291 -21 1930 82 7 82 chr17 67449682 67449987 -22054566 + AluY SINE Alu 16 297 -14 2114 101 0 20 chr17 67450033 67450329 -22054224 - AluSc SINE Alu -19 290 1 813 164 0 22 chr17 67450563 67450697 -22053856 + FLAM_C SINE Alu 1 131 -2 221 176 0 20 chr17 67451069 67451120 -22053433 + (TA)n Simple_repeat Simple_repeat 2 51 0 401 0 20 0 chr17 67451905 67451954 -22052599 + (CA)n Simple_repeat Simple_repeat 2 51 0 22 56 0 0 chr17 67454424 67454460 -22050093 + GC_rich Low_complexity Low_complexity 1 36 0 257 67 0 22 chr17 67454703 67454748 -22049805 + (CCG)n Simple_repeat Simple_repeat 2 45 0 25 83 0 0 chr17 67454761 67454821 -22049732 + GC_rich Low_complexity Low_complexity 1 60 0 544 243 220 5 chr17 67455743 67455957 -22048596 + MIR SINE MIR 3 262 0 187 292 0 0 chr17 67455968 67456016 -22048537 + MIR SINE MIR 160 207 -55 281 237 21 54 chr17 67456025 67456118 -22048435 + L2 LINE L2 3221 3310 -3 389 225 189 68 chr17 67456449 67456671 -22047882 + MIR SINE MIR 12 260 -2 228 246 8 62 chr17 67457404 67457534 -22047019 + GA-rich Low_complexity Low_complexity 3 125 0 2302 46 57 4 chr17 67457685 67457965 -22046588 + AluY SINE Alu 1 295 -16 474 113 0 0 chr17 67457992 67458063 -22046490 + L1MC1 LINE L1 6192 6262 -71 2329 110 0 0 chr17 67458111 67458411 -22046142 + AluSx SINE Alu 1 300 -12 232 222 175 88 chr17 67458422 67458593 -22045960 - L1ME4a LINE L1 -32 6089 5904 1653 158 62 7 chr17 67458737 67459009 -22045544 + AluJb SINE Alu 1 287 -25 260 273 10 20 chr17 67459042 67459141 -22045412 + MIR SINE MIR 109 206 -56 1012 237 59 0 chr17 67459539 67459604 -22044949 - MER33 DNA MER1_type -2280 305 245 2324 110 0 13 chr17 67459604 67459914 -22044639 + AluSg SINE Alu 1 306 -4 1012 237 59 0 chr17 67459914 67460135 -22044418 - MER33 DNA MER1_type -2340 245 2 219 247 96 41 chr17 67460596 67460669 -22043884 + MIR3 SINE MIR 91 167 -41 184 311 27 0 chr17 67460719 67460793 -22043760 - MIR SINE MIR -78 184 109 1171 109 57 129 chr17 67461084 67461332 -22043221 - AluJo SINE Alu -18 294 65 1757 99 13 0 chr17 67461362 67461594 -22042959 - AluSq SINE Alu -78 235 1 1009 113 0 0 chr17 67462175 67462308 -22042245 + AluSx SINE Alu 1 133 -180 5450 52 9 8 chr17 67462312 67462967 -22041586 + SVA Other Other 730 1385 -1 1119 235 8 0 chr17 67462967 67463218 -22041335 - L1M4 LINE L1 -2042 4104 3852 1178 146 0 0 chr17 67463221 67463399 -22041154 + AluSx SINE Alu 119 296 -14 232 245 46 80 chr17 67463463 67463614 -22040939 - L2 LINE L2 0 3313 3168 2068 131 0 26 chr17 67463899 67464205 -22040348 - AluSx SINE Alu -14 298 1 1332 140 0 59 chr17 67464205 67464426 -22040127 - AluJb SINE Alu -18 294 87 326 258 104 59 chr17 67464441 67464662 -22039891 + LTR33A LTR ERVL 42 272 -251 1673 224 84 46 chr17 67464666 67465166 -22039387 - MLT1F LTR MaLR 0 542 24 1891 96 3 118 chr17 67465167 67465499 -22039054 + AluSx SINE Alu 1 294 -8 430 265 105 86 chr17 67465545 67465858 -22038695 - MLT1F-int LTR MaLR 0 1371 1053 1701 164 14 11 chr17 67466132 67466419 -22038134 - AluSx SINE Alu -7 305 18 767 134 7 49 chr17 67466419 67466561 -22037992 - AluJb SINE Alu -170 142 7 501 265 97 27 chr17 67466573 67466758 -22037795 - MLT1F-int LTR MaLR -1173 198 1 574 221 0 38 chr17 67466758 67466887 -22037666 - MLT1F LTR MaLR 0 567 444 329 250 0 14 chr17 67466887 67466959 -22037594 + MER66B LTR ERV1 1 71 -415 1743 155 24 14 chr17 67466974 67467265 -22037288 + AluJb SINE Alu 6 299 -13 26 30 0 0 chr17 67467265 67467298 -22037255 + AT_rich Low_complexity Low_complexity 1 33 0 1877 155 131 19 chr17 67467309 67467676 -22036877 + MER66B LTR ERV1 79 486 0 552 200 0 0 chr17 67467676 67467766 -22036787 - MLT1F LTR MaLR -120 422 333 508 226 117 0 chr17 67467978 67468115 -22036438 + MER103 DNA DNA 7 159 -7 2502 73 3 0 chr17 67468253 67468553 -22036000 + AluSp SINE Alu 1 301 -12 874 228 12 0 chr17 67468744 67468911 -22035642 - FAM SINE Alu -6 169 1 1827 228 107 34 chr17 67469258 67469324 -22035229 - MLT1F LTR MaLR 0 542 482 2076 118 17 14 chr17 67469324 67469620 -22034933 - AluSx SINE Alu -15 297 1 1827 228 107 34 chr17 67469620 67470058 -22034495 - MLT1F LTR MaLR -60 482 1 2142 146 0 0 chr17 67470460 67470761 -22033792 - AluSx SINE Alu -11 301 1 2242 98 10 0 chr17 67471082 67471378 -22033175 - AluSp SINE Alu -14 299 1 2134 111 0 21 chr17 67471521 67471832 -22032721 + AluSg SINE Alu 1 305 0 2292 88 0 0 chr17 67471833 67472148 -22032405 + AluSx SINE Alu 1 315 0 31 0 0 0 chr17 67472258 67472289 -22032264 + AT_rich Low_complexity Low_complexity 1 31 0 2592 47 0 10 chr17 67472589 67472889 -22031664 - AluY SINE Alu -14 297 1 892 242 135 61 chr17 67472951 67473409 -22031144 + MLT1H1 LTR MaLR 64 555 0 2258 110 16 0 chr17 67473643 67473951 -22030602 + AluSq SINE Alu 1 313 0 341 321 36 0 chr17 67474254 67474394 -22030159 - MIR SINE MIR -43 219 75 2337 89 0 13 chr17 67474545 67474849 -22029704 + AluSp SINE Alu 1 300 -13 2226 125 3 0 chr17 67475753 67476056 -22028497 - AluSq SINE Alu -9 304 1 2670 206 50 2 chr17 67476168 67476747 -22027806 + L1ME3A LINE L1 5554 6160 -10 570 98 0 0 chr17 67477687 67477769 -22026784 + (CAA)n Simple_repeat Simple_repeat 2 83 0 1044 182 5 0 chr17 67477961 67478153 -22026400 - AluSp SINE Alu -30 283 91 1303 81 6 0 chr17 67478274 67478435 -22026118 - AluSp SINE Alu -151 162 1 636 177 137 11 chr17 67478833 67479008 -22025545 + MIR SINE MIR 66 262 0 2333 114 3 0 chr17 67479229 67479536 -22025017 + AluSp SINE Alu 1 308 -5 1861 143 0 7 chr17 67480486 67480772 -22023781 - AluJb SINE Alu -26 286 3 403 218 136 41 chr17 67480773 67480920 -22023633 + MIR SINE MIR 90 250 -12 2112 119 10 16 chr17 67480969 67481280 -22023273 + AluSx SINE Alu 1 309 -3 1120 244 74 31 chr17 67481409 67481733 -22022820 + MLT1E2 LTR MaLR 1 338 -288 1194 158 149 0 chr17 67481740 67481962 -22022591 + AluJo SINE Alu 1 255 -57 2286 95 0 32 chr17 67481996 67482311 -22022242 + AluSq SINE Alu 1 305 -8 831 229 22 11 chr17 67482315 67482494 -22022059 + MLT1E2 LTR MaLR 325 505 0 23 68 0 0 chr17 67482629 67482673 -22021880 + AT_rich Low_complexity Low_complexity 1 44 0 2411 109 0 0 chr17 67484178 67484491 -22020062 + AluSp SINE Alu 1 313 0 1132 157 0 0 chr17 67484509 67484675 -22019878 - FRAM SINE Alu -13 163 1 2392 96 3 6 chr17 67484970 67485284 -22019269 - AluSq SINE Alu 0 313 1 192 304 0 43 chr17 67485731 67485800 -22018753 - MIR3 SINE MIR -32 176 111 212 253 88 22 chr17 67486161 67486252 -22018301 + L2 LINE L2 2590 2686 -628 342 0 0 0 chr17 67486274 67486312 -22018241 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2318 73 3 3 chr17 67486314 67486602 -22017951 - AluY SINE Alu -23 288 1 1514 137 87 47 chr17 67486617 67486938 -22017615 - L1MC2 LINE L1 -9 6335 6002 1926 145 50 0 chr17 67486969 67487252 -22017301 + AluJo SINE Alu 1 297 -15 183 276 92 43 chr17 67487315 67487478 -22017075 + L2 LINE L2 2827 2997 -275 248 308 252 0 chr17 67487487 67487594 -22016959 + L2 LINE L2 3133 3266 -6 1674 179 7 36 chr17 67487774 67488081 -22016472 + AluJo SINE Alu 1 298 -14 405 333 159 24 chr17 67488153 67488607 -22015946 - L2 LINE L2 -2465 849 335 1591 170 7 15 chr17 67489138 67489409 -22015144 - AluJo SINE Alu -30 282 14 2179 128 0 0 chr17 67490386 67490683 -22013870 - AluSx SINE Alu -14 298 2 2147 112 0 48 chr17 67491714 67492027 -22012526 + AluSx SINE Alu 1 298 -14 2038 133 0 13 chr17 67492584 67492886 -22011667 + AluJb SINE Alu 1 298 -14 2133 121 0 10 chr17 67493349 67493654 -22010899 + AluSx SINE Alu 1 302 -10 922 177 0 7 chr17 67493654 67493801 -22010752 + AluJo/FRAM SINE Alu 134 279 -33 1103 160 0 16 chr17 67494251 67494438 -22010115 - AluSp SINE Alu 0 313 130 2136 140 0 0 chr17 67496638 67496930 -22007623 + AluSx SINE Alu 1 292 -20 420 260 155 43 chr17 67496930 67496973 -22007580 + L1ME4a LINE L1 5606 5643 -478 2210 107 3 0 chr17 67496973 67497281 -22007272 + AluSp SINE Alu 1 313 0 420 260 155 43 chr17 67497281 67497495 -22007058 + L1ME4a LINE L1 5643 5892 -229 2418 82 3 7 chr17 67497496 67497801 -22006752 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 67497835 67497856 -22006697 + AT_rich Low_complexity Low_complexity 1 21 0 746 76 133 0 chr17 67497875 67497980 -22006573 + FLAM_C SINE Alu 10 128 -15 2256 78 11 3 chr17 67498546 67498854 -22005699 + AluSp SINE Alu 1 310 0 360 282 0 17 chr17 67499425 67499542 -22005011 - MIR SINE MIR -34 228 114 1883 138 14 10 chr17 67499760 67500051 -22004502 - AluSc SINE Alu -17 292 1 926 95 0 95 chr17 67500051 67500199 -22004354 - AluSg SINE Alu -176 134 1 988 166 0 11 chr17 67500212 67500387 -22004166 + FRAM SINE Alu 1 172 -4 301 189 81 0 chr17 67500543 67500617 -22003936 + MLT1K LTR MaLR 509 588 0 1963 146 0 26 chr17 67500909 67501211 -22003342 - AluSq SINE Alu -19 294 1 346 250 29 19 chr17 67502355 67502459 -22002094 + MIR SINE MIR 110 214 -48 2205 105 3 7 chr17 67502460 67502754 -22001799 + AluSc SINE Alu 1 293 -16 1045 263 63 78 chr17 67503148 67503279 -22001274 + L1MEd LINE L1 591 722 -5397 1833 121 0 4 chr17 67503279 67503528 -22001025 + AluSg SINE Alu 1 248 -62 1045 263 63 78 chr17 67503528 67504006 -22000547 + L1MEd LINE L1 722 1192 -4927 2045 148 0 0 chr17 67504006 67504297 -22000256 + AluSx SINE Alu 1 291 -21 1045 263 63 78 chr17 67504297 67504356 -22000197 + L1MEd LINE L1 1192 1250 -4869 341 214 122 0 chr17 67504519 67504617 -21999936 - MIR SINE MIR -75 187 78 288 180 109 62 chr17 67504690 67504818 -21999735 + L1ME1 LINE L1 5832 5968 -196 2163 118 0 31 chr17 67504828 67505150 -21999403 + AluSx SINE Alu 1 312 0 1881 122 4 25 chr17 67505203 67505482 -21999071 + AluSx SINE Alu 1 273 -39 396 0 0 0 chr17 67505488 67505532 -21999021 + (CA)n Simple_repeat Simple_repeat 1 44 0 2408 76 6 19 chr17 67505758 67506074 -21998479 + AluSp SINE Alu 1 312 -1 22 70 0 0 chr17 67506554 67506597 -21997956 + AT_rich Low_complexity Low_complexity 1 43 0 2423 42 0 58 chr17 67506748 67507060 -21997493 + AluY SINE Alu 1 294 -17 2177 99 0 55 chr17 67507119 67507431 -21997122 + AluSx SINE Alu 1 295 -17 2257 115 3 10 chr17 67507874 67508186 -21996367 + AluSx SINE Alu 1 310 -2 1290 124 4 53 chr17 67508318 67508411 -21996142 + L1PA15 LINE L1 5946 6042 -123 2033 110 26 0 chr17 67508411 67508685 -21995868 + AluSg SINE Alu 1 279 -31 214 65 0 0 chr17 67508685 67508716 -21995837 + (CAAA)n Simple_repeat Simple_repeat 2 120 0 1290 124 4 53 chr17 67508716 67508845 -21995708 + L1PA15 LINE L1 6042 6160 -5 2225 104 0 0 chr17 67510252 67510559 -21993994 + AluSx SINE Alu 1 307 -5 462 182 70 42 chr17 67511118 67511261 -21993292 - MER69 DNA AcHobo -3 2523 2377 1490 178 65 122 chr17 67511280 67511339 -21993214 - MER69 DNA AcHobo -404 2122 2061 2163 114 3 0 chr17 67511339 67511638 -21992915 + AluSg SINE Alu 1 300 -10 1490 178 65 122 chr17 67511638 67511843 -21992710 - MER69 DNA AcHobo -465 2061 1846 836 50 0 0 chr17 67511843 67511943 -21992610 + HY3 scRNA scRNA 1 100 -1 1490 178 65 122 chr17 67511943 67512260 -21992293 - MER69 DNA AcHobo -680 1846 1573 1102 167 11 0 chr17 67512262 67512448 -21992105 + AluJo SINE Alu 122 309 -3 1120 56 22 22 chr17 67512452 67512631 -21991922 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 545 0 0 15 chr17 67512631 67512697 -21991856 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 984 113 27 0 chr17 67512725 67512875 -21991678 - AluSq SINE Alu -48 265 112 1143 95 0 0 chr17 67512977 67513135 -21991418 + AluJb SINE Alu 155 312 0 1410 150 9 0 chr17 67513147 67513373 -21991180 - AluSg/x SINE Alu -9 301 74 26 30 0 0 chr17 67513390 67513423 -21991130 + AT_rich Low_complexity Low_complexity 1 33 0 1010 102 70 0 chr17 67514144 67514301 -21990252 - AluSg/x SINE Alu -19 291 124 688 181 69 0 chr17 67514408 67514524 -21990029 - FLAM_C SINE Alu -9 124 1 207 69 0 0 chr17 67514541 67514570 -21989983 + (CACCT)n Simple_repeat Simple_repeat 2 30 0 2176 101 3 3 chr17 67515040 67515347 -21989206 + AluSq SINE Alu 1 307 -6 1332 121 184 16 chr17 67515360 67515616 -21988937 + AluSg1 SINE Alu 7 305 -4 961 259 53 96 chr17 67516403 67516539 -21988014 + MLT1J LTR MaLR 1 141 -370 1935 119 27 0 chr17 67516539 67516833 -21987720 + AluSg SINE Alu 1 302 -8 961 259 53 96 chr17 67516833 67517167 -21987386 + MLT1J LTR MaLR 141 448 -63 1961 162 3 3 chr17 67517167 67517495 -21987058 - L1PB4 LINE L1 -14 6142 5815 961 259 53 96 chr17 67517495 67517555 -21986998 + MLT1J LTR MaLR 448 509 -2 22 0 0 0 chr17 67517667 67517689 -21986864 + AT_rich Low_complexity Low_complexity 1 22 0 2127 111 0 0 chr17 67517697 67517985 -21986568 + AluSx SINE Alu 1 288 -24 270 0 0 0 chr17 67517990 67518020 -21986533 + (TAA)n Simple_repeat Simple_repeat 3 32 0 487 218 129 35 chr17 67518024 67518194 -21986359 + L1ME3A LINE L1 5980 6165 -5 2231 83 0 19 chr17 67518342 67518655 -21985898 - AluY SINE Alu -4 307 1 365 227 27 55 chr17 67518739 67518849 -21985704 + L2 LINE L2 3156 3262 -51 188 286 130 0 chr17 67518852 67518929 -21985624 + L2 LINE L2 3225 3311 -2 2376 73 3 0 chr17 67519146 67519446 -21985107 + AluSp SINE Alu 1 301 -12 2301 76 3 0 chr17 67519447 67519749 -21984804 + AluY SINE Alu 1 303 -8 1839 138 0 30 chr17 67520665 67520851 -21983702 - AluSx SINE Alu -24 288 113 2093 121 0 3 chr17 67520851 67521156 -21983397 + AluSg SINE Alu 3 306 -4 1839 138 0 30 chr17 67521156 67521266 -21983287 - AluSx SINE Alu -199 113 1 370 283 50 71 chr17 67521279 67521477 -21983076 - L2 LINE L2 -5 3308 3115 2168 106 3 0 chr17 67521479 67521771 -21982782 - AluSx SINE Alu -19 293 1 2282 105 0 0 chr17 67521874 67522180 -21982373 + AluSx SINE Alu 1 306 -6 2049 94 4 0 chr17 67522215 67522491 -21982062 + AluSx SINE Alu 7 283 -29 279 56 28 0 chr17 67522491 67522527 -21982026 - Alu SINE Alu -256 47 11 441 0 0 0 chr17 67522537 67522586 -21981967 + (TG)n Simple_repeat Simple_repeat 2 50 0 461 311 184 9 chr17 67522625 67522837 -21981716 + MIR SINE MIR 14 262 0 21 0 0 0 chr17 67523175 67523196 -21981357 + AT_rich Low_complexity Low_complexity 1 21 0 2017 106 18 0 chr17 67523196 67523480 -21981073 - AluSx SINE Alu -23 289 1 310 343 59 8 chr17 67524270 67524402 -21980151 + MIR SINE MIR 36 175 -67 2312 91 0 0 chr17 67524603 67524912 -21979641 + AluSp SINE Alu 1 309 -4 315 279 23 39 chr17 67525548 67525668 -21978885 + L1MEc LINE L1 1210 1329 -5067 1885 128 6 34 chr17 67525668 67525950 -21978603 + AluSx SINE Alu 1 274 -38 255 31 0 0 chr17 67525950 67525982 -21978571 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1885 128 6 34 chr17 67525982 67526020 -21978533 + AluSx SINE Alu 274 312 0 223 320 88 0 chr17 67526083 67526208 -21978345 + L2 LINE L2 1773 1908 -1406 847 287 102 51 chr17 67529941 67530192 -21974361 + L2 LINE L2 1900 2137 -1177 2433 130 33 15 chr17 67530192 67530583 -21973970 + MER48 LTR ERV1 1 398 0 847 287 102 51 chr17 67530583 67530647 -21973906 + L2 LINE L2 2137 2196 -1118 2408 75 0 3 chr17 67530647 67530966 -21973587 + AluYb8 SINE Alu 1 318 0 847 287 102 51 chr17 67530966 67531238 -21973315 + L2 LINE L2 2196 2518 -796 903 296 0 27 chr17 67531315 67531616 -21972937 - AluJb SINE Alu -9 293 1 3358 164 24 54 chr17 67531997 67532019 -21972534 - L1MB3 LINE L1 -12 6171 6150 1734 160 0 23 chr17 67532019 67532319 -21972234 - AluJb SINE Alu -19 293 1 3358 164 24 54 chr17 67532319 67532338 -21972215 - L1MB3 LINE L1 -33 6150 6132 2036 124 0 13 chr17 67532338 67532644 -21971909 - AluSx SINE Alu -10 302 1 3358 164 24 54 chr17 67532644 67533211 -21971342 - L1MB3 LINE L1 -51 6132 5585 2196 112 0 0 chr17 67533211 67533516 -21971037 - AluSp SINE Alu -8 305 1 3358 164 24 54 chr17 67533516 67533623 -21970930 - L1MB3 LINE L1 -598 5585 5476 264 136 45 0 chr17 67533623 67533667 -21970886 - AluJb SINE Alu -17 284 239 2941 104 2 26 chr17 67533669 67533834 -21970719 + MER61E LTR ERV1 1 168 -401 2136 85 0 29 chr17 67533834 67534141 -21970412 + AluSg SINE Alu 1 298 -12 2941 104 2 26 chr17 67534141 67534396 -21970157 + MER61E LTR ERV1 168 411 -158 1693 118 0 33 chr17 67534496 67534767 -21969786 + AluSx SINE Alu 39 300 -12 2828 124 27 5 chr17 67534767 67535171 -21969382 + MER61E LTR ERV1 157 569 0 1400 171 0 0 chr17 67535171 67535411 -21969142 - AluJb SINE Alu -71 241 2 1827 114 16 66 chr17 67535411 67535728 -21968825 - AluSx SINE Alu -11 301 1 1833 157 28 41 chr17 67535729 67535940 -21968613 - L1MB3 LINE L1 -698 5485 5273 2163 113 0 0 chr17 67535940 67536250 -21968303 - AluSg SINE Alu 0 310 1 1833 157 28 41 chr17 67536250 67536536 -21968017 - L1MB3 LINE L1 -910 5273 4985 668 251 103 45 chr17 67536536 67536960 -21967593 + L2 LINE L2 2703 3192 -121 2247 88 0 3 chr17 67537055 67537350 -21967203 + AluSq SINE Alu 1 294 -19 1923 134 0 3 chr17 67537370 67537654 -21966899 + AluJb SINE Alu 13 295 -17 857 132 20 18 chr17 67537936 67538102 -21966451 + LTR7 LTR ERV1 1 218 -232 883 183 69 15 chr17 67538392 67538594 -21965959 + LTR7 LTR ERV1 238 450 0 1894 138 0 0 chr17 67538749 67539052 -21965501 - AluSx SINE Alu 0 303 1 345 100 0 0 chr17 67539237 67539287 -21965266 - AluSq SINE Alu -3 298 249 420 258 227 12 chr17 67540060 67540223 -21964330 - MIR3 SINE MIR -6 202 5 1670 120 81 14 chr17 67540437 67540721 -21963832 - AluSx SINE Alu -9 303 1 722 128 269 0 chr17 67541085 67541234 -21963319 - MER53 DNA DNA 0 189 1 541 280 0 20 chr17 67541448 67541598 -21962955 - MER69 DNA AcHobo 0 2526 2380 2127 92 0 7 chr17 67541630 67541942 -21962611 + AluSx SINE Alu 1 310 0 204 243 0 0 chr17 67541942 67541979 -21962574 + MIR SINE MIR 213 249 -13 835 195 82 6 chr17 67542461 67542620 -21961933 - AluSq SINE Alu -53 260 90 24 0 0 0 chr17 67542731 67542755 -21961798 + AT_rich Low_complexity Low_complexity 1 24 0 182 297 0 0 chr17 67542755 67542792 -21961761 + L2 LINE L2 3258 3294 -19 1742 147 43 13 chr17 67543221 67543520 -21961033 - AluJb SINE Alu -1 311 4 2008 113 0 52 chr17 67543589 67543917 -21960636 + AluSx SINE Alu 1 311 -1 2136 114 0 3 chr17 67544182 67544480 -21960073 - AluSq SINE Alu -16 297 1 326 294 56 21 chr17 67544578 67544721 -21959832 + L1ME4a LINE L1 5949 6096 -25 2053 118 10 0 chr17 67545195 67545491 -21959062 - AluSx SINE Alu -13 299 1 2086 109 3 0 chr17 67545516 67545810 -21958743 + AluSg SINE Alu 2 296 -14 1848 128 13 0 chr17 67546094 67546392 -21958161 - AluSx SINE Alu -5 307 6 533 161 136 8 chr17 67546485 67546603 -21957950 - FLAM_C SINE Alu 0 133 1 2124 120 0 7 chr17 67547141 67547476 -21957077 + AluSg SINE Alu 1 310 0 1358 177 4 0 chr17 67547544 67547798 -21956755 - AluSx SINE Alu -9 303 49 1763 116 0 4 chr17 67547900 67548182 -21956371 + AluSg SINE Alu 47 327 0 713 144 40 32 chr17 67548463 67548588 -21955965 - FLAM_C SINE Alu -13 130 5 2114 99 0 0 chr17 67548774 67549091 -21955462 + AluSx SINE Alu 1 317 0 2097 164 36 78 chr17 67549091 67549389 -21955164 + L1M4 LINE L1 4898 5207 -977 2194 96 3 0 chr17 67549389 67549681 -21954872 + AluSp SINE Alu 4 296 -17 2097 164 36 78 chr17 67549681 67549774 -21954779 + L1M4 LINE L1 5207 5302 -882 1899 158 48 6 chr17 67549774 67550104 -21954449 + MER7A DNA MER2_type 5 346 0 2097 164 36 78 chr17 67550104 67550156 -21954397 + L1M4 LINE L1 5302 5355 -829 2177 71 0 7 chr17 67550156 67550471 -21954082 + AluY SINE Alu 2 314 0 2097 164 36 78 chr17 67550471 67550856 -21953697 + L1M4 LINE L1 5355 5698 -486 1772 139 3 14 chr17 67550859 67551147 -21953406 - AluSx SINE Alu -23 289 5 499 154 10 10 chr17 67551186 67551198 -21953355 + GA-rich Low_complexity Low_complexity 3 14 -92 2080 92 36 3 chr17 67551198 67551501 -21953052 + AluSq SINE Alu 1 313 0 499 154 10 10 chr17 67551501 67551592 -21952961 + GA-rich Low_complexity Low_complexity 13 106 0 186 270 0 0 chr17 67551730 67551793 -21952760 + (TCTA)n Simple_repeat Simple_repeat 1 63 0 1875 160 0 19 chr17 67551973 67552285 -21952268 + AluJo SINE Alu 1 306 -6 283 250 200 10 chr17 67552409 67552509 -21952044 + L2 LINE L2 3154 3272 0 307 224 86 20 chr17 67552628 67552780 -21951773 + MER104 DNA Tc2 4 165 -15 230 258 186 10 chr17 67552802 67552899 -21951654 - L3 LINE CR1 -848 729 616 355 178 33 22 chr17 67552899 67552989 -21951564 + L3 LINE CR1 802 892 -685 296 289 10 41 chr17 67553219 67553316 -21951237 + L3 LINE CR1 883 976 -601 1064 168 0 0 chr17 67553336 67553509 -21951044 + FRAM SINE Alu 1 172 -4 673 142 9 0 chr17 67553687 67553793 -21950760 + FLAM_C SINE Alu 35 141 -2 2368 62 0 3 chr17 67553793 67554102 -21950451 + AluY SINE Alu 1 308 -3 404 321 213 0 chr17 67554104 67554353 -21950200 + L3 LINE CR1 1187 1488 -89 1729 223 128 28 chr17 67554355 67554848 -21949705 + MLT1F LTR MaLR 1 542 0 1998 139 0 0 chr17 67555023 67555325 -21949228 - AluSx SINE Alu -10 302 1 2069 118 0 10 chr17 67555870 67556174 -21948379 + AluSx SINE Alu 1 301 -11 431 206 43 35 chr17 67606705 67606747 -21897806 + L2 LINE L2 2674 2714 -600 1446 173 15 76 chr17 67606747 67607076 -21897477 + AluJo SINE Alu 1 309 -3 431 206 43 35 chr17 67607076 67607174 -21897379 + L2 LINE L2 2714 2815 -499 2246 91 0 3 chr17 67607184 67607470 -21897083 - AluSp SINE Alu -1 312 28 1697 173 26 33 chr17 67607579 67607886 -21896667 + AluSx SINE Alu 8 312 0 2018 153 3 0 chr17 67608167 67608467 -21896086 + AluJb SINE Alu 1 301 -11 1214 211 17 9 chr17 67608723 67608955 -21895598 - AluJb SINE Alu -76 236 3 2266 97 3 0 chr17 67609106 67609394 -21895159 + AluSq SINE Alu 6 294 -19 1092 86 0 0 chr17 67610140 67610279 -21894274 + AluSg/x SINE Alu 157 295 -15 411 183 0 0 chr17 67610280 67610351 -21894202 - L1ME LINE L1 -459 5711 5641 1971 132 3 13 chr17 67611235 67611538 -21893015 - AluSx SINE Alu -12 300 1 250 150 0 0 chr17 67611586 67611626 -21892927 - Alu SINE Alu -6 296 257 2426 97 0 0 chr17 67612080 67612388 -21892165 + AluSg SINE Alu 1 308 -2 661 255 205 12 chr17 67613744 67614003 -21890550 - MLT1J LTR MaLR 0 511 203 2095 156 0 0 chr17 67614009 67614316 -21890237 + AluSx SINE Alu 1 307 -5 905 184 0 24 chr17 67614316 67614484 -21890069 + AluJb SINE Alu 137 300 -12 787 203 75 27 chr17 67614495 67614682 -21889871 - MLT1J LTR MaLR -315 196 1 294 188 94 0 chr17 67614684 67614748 -21889805 + LTR67 LTR ERVL 479 548 -9 2003 118 11 0 chr17 67614783 67615111 -21889442 - AluSx SINE Alu 0 331 1 3528 108 0 0 chr17 67615111 67615591 -21888962 - L1PA16 LINE L1 -192 5974 5495 2125 131 3 3 chr17 67615591 67615897 -21888656 - AluSx SINE Alu -6 306 1 2255 113 0 0 chr17 67616458 67616758 -21887795 - AluSq SINE Alu -13 300 1 279 0 0 0 chr17 67617216 67617247 -21887306 + (TA)n Simple_repeat Simple_repeat 2 32 0 1253 135 0 0 chr17 67617333 67617511 -21887042 - AluSg/x SINE Alu -1 311 134 2291 85 0 10 chr17 67617511 67617824 -21886729 - AluSq SINE Alu 0 313 1 23 54 0 0 chr17 67617833 67617870 -21886683 + AT_rich Low_complexity Low_complexity 1 37 0 2798 175 116 11 chr17 67617892 67618502 -21886051 - L1MC4 LINE L1 -2 8040 7367 301 297 47 0 chr17 67618502 67618630 -21885923 - L1ME4a LINE L1 -227 5894 5761 21 0 0 0 chr17 67618717 67618738 -21885815 + AT_rich Low_complexity Low_complexity 1 21 0 2190 118 3 0 chr17 67618741 67619038 -21885515 - AluSx SINE Alu -14 298 1 2028 85 7 14 chr17 67619047 67619328 -21885225 - L1P4 LINE L1 -344 5819 5541 839 181 13 0 chr17 67619345 67619494 -21885059 - AluJb SINE Alu -25 287 137 410 178 11 0 chr17 67619520 67619610 -21884943 + CT-rich Low_complexity Low_complexity 1 91 0 2011 137 3 3 chr17 67619629 67619928 -21884625 - AluSx SINE Alu -13 299 1 587 222 43 0 chr17 67620240 67620357 -21884196 - MER91C DNA MER1_type -1 139 18 576 90 13 0 chr17 67620656 67620734 -21883819 - THE1C LTR MaLR 0 375 297 1201 236 67 90 chr17 67620834 67621313 -21883240 + L2 LINE L2 2830 3297 -16 1650 133 0 121 chr17 67621348 67621539 -21883014 - AluJo SINE Alu -10 302 168 2315 101 3 0 chr17 67621539 67621845 -21882708 - AluSp SINE Alu -5 308 2 1650 133 0 121 chr17 67621845 67621992 -21882561 - AluJo SINE Alu -144 168 5 2039 183 31 31 chr17 67622139 67622555 -21881998 - MLT2C2 LTR ERVL -48 416 1 2106 117 0 43 chr17 67622618 67622942 -21881611 - AluSx SINE Alu -2 310 1 912 108 0 0 chr17 67622975 67623095 -21881458 - AluSq/x SINE Alu -193 120 1 200 375 154 41 chr17 67623095 67623362 -21881191 - L2 LINE L2 -89 3183 2887 690 187 0 0 chr17 67623823 67623946 -21880607 + L1P LINE L1 4467 4589 -1557 642 217 22 65 chr17 67624047 67624231 -21880322 + L2 LINE L2 3138 3313 0 2109 99 46 3 chr17 67625432 67625716 -21878837 - AluSg SINE Alu -13 297 2 1118 183 195 57 chr17 67625740 67625856 -21878697 - AluJo SINE Alu -2 300 201 2062 142 0 0 chr17 67625856 67626151 -21878402 - AluSx SINE Alu -17 295 1 1118 183 195 57 chr17 67626151 67626296 -21878257 - AluJo SINE Alu -101 201 3 1127 237 16 0 chr17 67627006 67627259 -21877294 + MIR SINE MIR 3 259 -3 251 203 0 38 chr17 67628002 67628019 -21876534 + T-rich Low_complexity Low_complexity 5 21 -59 1638 157 33 0 chr17 67628019 67628293 -21876260 - L1MA6 LINE L1 -3 6297 6015 251 203 0 38 chr17 67628293 67628354 -21876199 + T-rich Low_complexity Low_complexity 21 80 0 19387 28 1 0 chr17 67628360 67631292 -21873261 - L1PA4 LINE L1 -8 6147 3213 3376 59 26 9 chr17 67631292 67631704 -21872849 - L1PA8 LINE L1 -1 6171 5739 1207 99 0 0 chr17 67631709 67631881 -21872672 - L1P3 LINE L1 -3240 3221 3050 * 9847 129 25 12 chr17 67631871 67633392 -21871161 - L1P3 LINE L1 -4911 1550 10 214 122 24 24 chr17 67633513 67633554 -21870999 + MER5A DNA MER1_type 149 189 0 1752 184 0 13 chr17 67634073 67634372 -21870181 - AluJo SINE Alu -17 295 1 955 178 0 0 chr17 67634397 67634549 -21870004 - AluJb SINE Alu -25 287 136 283 160 0 0 chr17 67636512 67636562 -21867991 - Alu SINE Alu 0 302 253 243 384 90 23 chr17 67636673 67636850 -21867703 + L2 LINE L2 569 757 -2557 460 372 60 24 chr17 67636850 67637186 -21867367 + L2 LINE L2 564 911 -2403 3786 153 19 2 chr17 67637514 67638109 -21866444 + L1PB4 LINE L1 5550 6154 -2 261 367 27 14 chr17 67638146 67638293 -21866260 + L2 LINE L2 1333 1481 -1833 2465 69 0 13 chr17 67638343 67638646 -21865907 - AluSq SINE Alu -14 299 1 493 324 56 69 chr17 67638646 67639068 -21865485 + L2 LINE L2 2274 2700 -614 1679 172 6 58 chr17 67639068 67639394 -21865159 - AluJb SINE Alu -2 310 2 493 324 56 69 chr17 67639394 67639521 -21865032 + L2 LINE L2 2700 2817 -497 2166 196 87 11 chr17 67639521 67639990 -21864563 - MLT1D LTR MaLR 0 505 1 493 324 56 69 chr17 67639990 67640031 -21864522 + L2 LINE L2 2817 2857 -457 1452 194 90 4 chr17 67640138 67640417 -21864136 - Tigger1 DNA MER2_type -2115 303 1 952 126 7 0 chr17 67640460 67640595 -21863958 + AluSq/x SINE Alu 1 136 -177 1579 154 73 0 chr17 67641013 67641272 -21863281 + AluSx SINE Alu 20 297 -15 903 191 29 20 chr17 67641798 67641851 -21862702 - MER3 DNA MER1_type -3 206 155 1643 189 10 0 chr17 67641851 67642142 -21862411 + AluJb SINE Alu 1 294 -18 903 191 29 20 chr17 67642142 67642292 -21862261 - MER3 DNA MER1_type -54 155 1 192 380 117 7 chr17 67642595 67642732 -21861821 + MIR3 SINE MIR 42 193 -15 262 181 87 14 chr17 67645710 67645848 -21858705 + (TA)n Simple_repeat Simple_repeat 1 148 0 2132 122 17 0 chr17 67646132 67646426 -21858127 - AluSx SINE Alu -13 299 1 1926 142 82 3 chr17 67648051 67648369 -21856184 - MER7A DNA MER2_type -5 341 1 2102 129 10 0 chr17 67648578 67648881 -21855672 - AluSx SINE Alu -6 306 1 282 291 81 34 chr17 67649338 67649443 -21855110 + L1MC4a LINE L1 6428 6543 -1265 2220 120 0 0 chr17 67649443 67649751 -21854802 + AluSg1 SINE Alu 1 308 -1 282 291 81 34 chr17 67649751 67649793 -21854760 + L1MC4a LINE L1 6543 6582 -1226 1403 128 0 10 chr17 67649793 67649997 -21854556 + AluSq SINE Alu 33 234 -79 554 176 22 0 chr17 67649999 67650090 -21854463 + AluJb SINE Alu 203 295 -17 2195 129 0 7 chr17 67650091 67650394 -21854159 + AluSg SINE Alu 1 301 -9 2123 119 0 10 chr17 67650404 67650707 -21853846 + AluSc SINE Alu 1 300 -9 487 224 104 31 chr17 67650724 67650916 -21853637 + L1MC4a LINE L1 7034 7239 -569 2086 135 0 0 chr17 67650918 67651214 -21853339 + AluSx SINE Alu 1 296 -16 304 281 21 0 chr17 67651214 67651303 -21853250 + L1MC4 LINE L1 7808 7901 -141 182 348 45 27 chr17 67651527 67651748 -21852805 - L2 LINE L2 -1228 2086 1862 1708 162 3 10 chr17 67651748 67652044 -21852509 + AluSx SINE Alu 1 294 -18 2379 90 0 0 chr17 67652046 67652347 -21852206 + AluY SINE Alu 1 301 -10 219 350 17 0 chr17 67652498 67652558 -21851995 + MIR SINE MIR 17 77 -185 214 216 34 114 chr17 67652561 67652649 -21851904 + MIR SINE MIR 44 124 -138 26 0 0 0 chr17 67652991 67653017 -21851536 + AT_rich Low_complexity Low_complexity 1 26 0 196 250 42 0 chr17 67653782 67653854 -21850699 + MIR SINE MIR 132 206 -56 1781 124 0 29 chr17 67654064 67654337 -21850216 + AluSx SINE Alu 30 294 -18 460 293 104 0 chr17 67654475 67654639 -21849914 - MIR SINE MIR -19 243 63 436 261 94 45 chr17 67654766 67655053 -21849500 - L1ME4a LINE L1 -246 5875 5575 754 246 103 18 chr17 67655125 67655349 -21849204 - MIR SINE MIR -11 251 9 404 271 106 87 chr17 67656240 67656610 -21847943 - L1ME4a LINE L1 -23 6098 5714 1089 204 41 23 chr17 67656610 67656830 -21847723 - MER58A DNA MER1_type 0 224 1 404 271 106 87 chr17 67656830 67656976 -21847577 - L1ME4a LINE L1 -407 5714 5572 4246 156 56 62 chr17 67657268 67658622 -21845931 - L1MA9 LINE L1 -3 6331 4873 347 49 39 0 chr17 67658628 67658685 -21845868 - MER41A LTR ERV1 -76 478 418 294 242 0 0 chr17 67658685 67658751 -21845802 - L1ME4a LINE L1 -1261 4885 4820 465 290 21 14 chr17 67658751 67658896 -21845657 - MIR SINE MIR -97 165 20 494 233 17 0 chr17 67658906 67659026 -21845527 - MER20 DNA MER1_type 0 219 98 456 287 35 14 chr17 67659054 67659197 -21845356 - MIR SINE MIR -70 192 47 181 147 0 0 chr17 67659797 67659831 -21844722 + MIR SINE MIR 123 156 -106 1867 155 3 7 chr17 67660131 67660435 -21844118 + AluJo SINE Alu 1 303 -9 286 264 25 16 chr17 67662578 67662699 -21841854 - MER113 DNA MER1_type? -380 141 20 345 283 0 42 chr17 67663123 67663243 -21841310 + L2 LINE L2 2458 2572 -742 536 231 39 106 chr17 67664132 67664304 -21840249 + L1MD3 LINE L1 7705 7848 -147 1621 157 0 27 chr17 67664304 67664603 -21839950 - AluJo SINE Alu -21 291 1 536 231 39 106 chr17 67664603 67664742 -21839811 + L1MD3 LINE L1 7848 7995 0 949 289 40 17 chr17 67670059 67670578 -21833975 - L1MC3 LINE L1 -1771 6014 5484 187 161 0 129 chr17 67675263 67675325 -21829228 - MIR SINE MIR -137 71 18 * 247 306 82 61 chr17 67675305 67675452 -21829101 + MIR SINE MIR 94 243 -19 1626 193 58 3 chr17 67676502 67676828 -21827725 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 67676907 67676932 -21827621 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1424 179 112 29 chr17 67677282 67677622 -21826931 - THE1C LTR MaLR 0 375 8 412 71 0 0 chr17 67677807 67677863 -21826690 + AluSp/q SINE Alu 241 296 -17 1337 227 90 109 chr17 67677907 67678138 -21826415 - L1ME3A LINE L1 -104 6066 5832 1935 148 3 0 chr17 67678138 67678442 -21826111 - AluJb SINE Alu -7 305 1 1337 227 90 109 chr17 67678442 67678898 -21825655 - L1ME3A LINE L1 -338 5832 5392 2170 105 0 3 chr17 67678899 67679194 -21825359 - AluSg SINE Alu -16 294 1 1532 244 123 34 chr17 67679194 67679681 -21824872 - L1ME3A LINE L1 -981 5165 4594 458 17 17 0 chr17 67679681 67679740 -21824813 + (CA)n Simple_repeat Simple_repeat 1 60 0 1532 244 123 34 chr17 67679740 67679957 -21824596 - L1ME3A LINE L1 -1552 4594 4398 1343 201 96 78 chr17 67680001 67680385 -21824168 + MLT1C LTR MaLR 6 401 -66 2134 80 23 3 chr17 67680385 67680684 -21823869 + AluSc SINE Alu 1 305 -4 1343 201 96 78 chr17 67680684 67680746 -21823807 + MLT1C LTR MaLR 401 460 -7 3144 150 37 47 chr17 67680846 67681140 -21823413 - L1P4 LINE L1 -412 5754 5459 2409 66 0 3 chr17 67681140 67681444 -21823109 + AluY SINE Alu 1 303 -8 3144 150 37 47 chr17 67681444 67682300 -21822253 - L1P4 LINE L1 -707 5459 4628 1443 186 0 58 chr17 67682489 67682784 -21821769 + AluJb SINE Alu 11 288 -24 189 0 0 0 chr17 67682791 67682812 -21821741 + (TA)n Simple_repeat Simple_repeat 1 21 0 354 202 0 125 chr17 67682812 67682916 -21821637 - L1MC4 LINE L1 -1339 6703 6613 200 86 29 0 chr17 67682938 67682973 -21821580 + (TA)n Simple_repeat Simple_repeat 1 36 0 1708 191 21 52 chr17 67683084 67683466 -21821087 - MLT1A2 LTR MaLR -4 370 1 23 54 0 0 chr17 67683711 67683748 -21820805 + AT_rich Low_complexity Low_complexity 1 37 0 196 373 45 0 chr17 67684339 67684449 -21820104 - L2 LINE L2 0 3313 3199 6032 107 20 0 chr17 67684875 67685815 -21818738 - L1PB1 LINE L1 -2 6149 5200 1000 282 21 34 chr17 67685880 67686206 -21818347 - MLT1G1 LTR MaLR -187 408 87 201 121 0 0 chr17 67686442 67686475 -21818078 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 3452 186 3 12 chr17 67686475 67687197 -21817356 - L1 LINE L1 -1243 4903 4189 291 54 0 0 chr17 67687530 67687567 -21816986 + (CA)n Simple_repeat Simple_repeat 2 38 0 315 96 0 0 chr17 67688983 67689065 -21815488 + Alu SINE Alu 243 314 0 271 335 173 64 chr17 67689095 67689453 -21815100 - L2 LINE L2 -4 3268 2872 1992 191 126 131 chr17 67689551 67690030 -21814523 - L1 LINE L1 -2706 3440 2967 2046 117 17 0 chr17 67690030 67690328 -21814225 - AluSq SINE Alu -10 303 1 1992 191 126 131 chr17 67690328 67690795 -21813758 - L1 LINE L1 -3179 2967 2499 33 25 0 0 chr17 67690988 67691028 -21813525 + AT_rich Low_complexity Low_complexity 1 40 0 247 263 9 88 chr17 67691135 67691249 -21813304 - L2 LINE L2 -927 2387 2283 384 251 98 54 chr17 67691689 67691892 -21812661 + MIR SINE MIR 5 216 -46 1086 153 0 6 chr17 67692268 67692445 -21812108 + AluSg/x SINE Alu 128 303 -7 1975 127 0 0 chr17 67692500 67692792 -21811761 - AluSq SINE Alu -21 292 1 401 0 0 53 chr17 67693219 67693276 -21811277 - L1PB1 LINE L1 -1 6150 6097 2123 110 3 0 chr17 67693277 67693576 -21810977 - AluSx SINE Alu -12 300 1 343 130 37 0 chr17 67693827 67693881 -21810672 + U6 snRNA snRNA 1 56 -51 1695 150 3 19 chr17 67694284 67694597 -21809956 - AluJb SINE Alu -4 308 1 672 227 0 0 chr17 67695081 67695213 -21809340 - AluJ SINE Alu -11 301 170 * 687 136 10 0 chr17 67695209 67695312 -21809241 - AluJ SINE Alu -193 119 16 22 0 0 0 chr17 67696251 67696273 -21808280 + AT_rich Low_complexity Low_complexity 1 22 0 1949 110 38 0 chr17 67696619 67696910 -21807643 - AluSx SINE Alu -10 302 1 400 352 102 26 chr17 67698115 67698459 -21806094 - L1MC/D LINE L1 -2118 5690 5321 2316 60 0 17 chr17 67698651 67698953 -21805600 - AluY SINE Alu -14 297 1 748 143 9 0 chr17 67699115 67699227 -21805326 + FLAM_C SINE Alu 1 113 -30 1454 140 0 95 chr17 67699431 67699746 -21804807 + AluJb SINE Alu 1 285 -27 315 0 0 0 chr17 67699746 67699780 -21804773 + (TG)n Simple_repeat Simple_repeat 1 69 0 315 0 0 0 chr17 67699780 67699815 -21804738 + (TG)n Simple_repeat Simple_repeat 2 36 0 285 257 0 79 chr17 67700096 67700197 -21804356 - MER5A DNA MER1_type -48 141 49 373 204 54 43 chr17 67700856 67700949 -21803604 + L2 LINE L2 3213 3306 -7 27 29 0 0 chr17 67700949 67700983 -21803570 + AT_rich Low_complexity Low_complexity 1 34 0 2144 177 3 10 chr17 67701300 67701684 -21802869 - L1PA16 LINE L1 0 6166 5786 2342 80 0 0 chr17 67701887 67702189 -21802364 + AluSc SINE Alu 1 302 -7 1332 180 76 24 chr17 67702221 67702510 -21802043 + AluJb SINE Alu 1 304 -8 2061 120 0 3 chr17 67703267 67703568 -21800985 + AluSg SINE Alu 1 300 -10 198 0 0 0 chr17 67703568 67703590 -21800963 + (TA)n Simple_repeat Simple_repeat 2 23 0 388 237 64 45 chr17 67704065 67704221 -21800332 + L1MC4 LINE L1 6811 6969 -1073 1484 206 6 6 chr17 67704279 67704590 -21799963 + AluJb SINE Alu 2 312 0 886 174 60 101 chr17 67704591 67704889 -21799664 + L1MC5 LINE L1 6906 7191 -770 590 206 175 12 chr17 67704905 67705065 -21799488 - MER20 DNA MER1_type -1 218 33 548 243 43 16 chr17 67705178 67705363 -21799190 + L1MC5 LINE L1 7311 7500 -461 911 188 84 5 chr17 67705461 67705663 -21798890 + AluJb SINE Alu 92 309 -3 2882 137 13 27 chr17 67705958 67706432 -21798121 + MLT1C LTR MaLR 1 467 0 2532 36 0 0 chr17 67706583 67706884 -21797669 + AluY SINE Alu 1 301 -10 1736 167 0 10 chr17 67706949 67707243 -21797310 + AluJb SINE Alu 1 291 -21 731 24 0 0 chr17 67707250 67707335 -21797218 + AluY SINE Alu 2 86 -225 1319 200 0 4 chr17 67707453 67707708 -21796845 - AluJb SINE Alu -54 258 5 297 333 103 14 chr17 67709481 67709647 -21794906 - MIR SINE MIR -42 220 42 641 187 0 37 chr17 67709697 67709831 -21794722 + FLAM_A SINE Alu 1 129 -4 2143 102 0 7 chr17 67710250 67710543 -21794010 - AluSx SINE Alu -1 311 21 2222 114 0 0 chr17 67710580 67710886 -21793667 - AluSx SINE Alu -6 306 1 1133 175 5 5 chr17 67711326 67711526 -21793027 + AluJo SINE Alu 5 204 -108 2016 33 0 0 chr17 67711552 67711793 -21792760 + AluY SINE Alu 1 241 -70 2165 126 3 0 chr17 67712219 67712520 -21792033 - AluSx SINE Alu -10 302 1 1776 178 7 10 chr17 67712664 67712962 -21791591 - AluJo SINE Alu -15 297 1 2085 86 0 4 chr17 67713071 67713340 -21791213 + AluY SINE Alu 44 311 0 591 251 72 92 chr17 67713630 67713738 -21790815 - MIR SINE MIR -12 250 141 2162 120 3 3 chr17 67713738 67714037 -21790516 - AluSx SINE Alu -13 299 1 591 251 72 92 chr17 67714037 67714179 -21790374 - MIR SINE MIR -121 141 5 2157 121 0 33 chr17 67715365 67715672 -21788881 - AluSx SINE Alu -15 297 1 249 33 0 0 chr17 67715672 67715702 -21788851 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 414 70 35 0 chr17 67715703 67715760 -21788793 - AluJ/FRAM SINE Alu -30 282 224 376 238 27 22 chr17 67715761 67715910 -21788643 - AluJ/FLAM SINE Alu -223 79 1 450 264 43 5 chr17 67715944 67716152 -21788401 - L1ME4a LINE L1 -202 5919 5704 21 57 0 0 chr17 67716158 67716193 -21788360 + AT_rich Low_complexity Low_complexity 1 35 0 236 156 0 0 chr17 67716207 67716252 -21788301 + L1M4 LINE L1 5242 5286 -860 1563 183 21 0 chr17 67716255 67716544 -21788009 + AluJb SINE Alu 2 296 -16 1049 81 7 0 chr17 67716653 67716789 -21787764 + AluSq/x SINE Alu 2 138 -174 1372 114 64 46 chr17 67716916 67717093 -21787460 - MER44D DNA MER2_type -1908 583 411 2194 102 0 7 chr17 67717093 67717386 -21787167 - AluSg SINE Alu -19 291 1 1372 114 64 46 chr17 67717386 67717488 -21787065 - MER44D DNA MER2_type -2080 411 29 3395 148 28 51 chr17 67717506 67717644 -21786909 + L1MB8 LINE L1 5241 5381 -797 1923 174 0 0 chr17 67717644 67717970 -21786583 + AluSx SINE Alu 1 312 0 3395 148 28 51 chr17 67717970 67718004 -21786549 + L1MB8 LINE L1 5381 5414 -764 1526 190 41 54 chr17 67718004 67718372 -21786181 - MLT1A1 LTR MaLR 0 365 3 3395 148 28 51 chr17 67718372 67718725 -21785828 + L1MB8 LINE L1 5414 5746 -432 1882 135 46 0 chr17 67718725 67719007 -21785546 + AluSx SINE Alu 1 295 -17 3395 148 28 51 chr17 67719007 67719238 -21785315 + L1MB8 LINE L1 5746 5981 -197 2452 43 40 0 chr17 67721141 67721440 -21783113 + AluYa5 SINE Alu 1 311 0 3247 166 156 54 chr17 67721879 67722143 -21782410 + L1MC4 LINE L1 6976 7212 -830 2177 105 0 0 chr17 67722143 67722458 -21782095 + AluSx SINE Alu 1 315 0 3247 166 156 54 chr17 67722458 67722937 -21781616 + L1MC4 LINE L1 7212 7641 -401 1707 117 117 11 chr17 67722937 67723211 -21781342 + AluSg SINE Alu 1 303 -7 3247 166 156 54 chr17 67723211 67723280 -21781273 + L1MC4 LINE L1 7641 7702 -340 180 111 0 0 chr17 67723280 67723307 -21781246 + (TATG)n Simple_repeat Simple_repeat 2 28 0 3247 166 156 54 chr17 67723307 67723398 -21781155 + L1MC4 LINE L1 7702 7782 -260 2089 139 0 0 chr17 67723398 67723693 -21780860 - AluSg SINE Alu -14 296 2 3247 166 156 54 chr17 67723693 67723746 -21780807 + L1MC4 LINE L1 7782 8034 -8 544 163 59 15 chr17 67723850 67723985 -21780568 + L1MC4a LINE L1 7009 7149 -659 2076 122 0 7 chr17 67723994 67724298 -21780255 + AluSq SINE Alu 1 302 -11 2076 117 34 3 chr17 67724423 67724714 -21779839 + AluSq SINE Alu 1 300 -13 211 208 113 0 chr17 67725617 67725670 -21778883 - L2 LINE L2 0 3313 3255 733 141 16 8 chr17 67725848 67725969 -21778584 + FLAM_C SINE Alu 3 124 -19 186 43 0 0 chr17 67725974 67725997 -21778556 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 496 264 130 40 chr17 67726476 67726829 -21777724 + L1MC4a LINE L1 5633 6017 -1791 246 258 66 33 chr17 67726951 67727102 -21777451 + L1MC4a LINE L1 6129 6284 -1524 2316 86 0 0 chr17 67727117 67727407 -21777146 - AluSg SINE Alu -18 292 3 1368 95 0 0 chr17 67727578 67727747 -21776806 - AluSx SINE Alu -143 169 1 286 114 0 0 chr17 67727882 67727926 -21776627 - L2 LINE L2 -3 3310 3267 2108 36 0 0 chr17 67728097 67728344 -21776209 + L1PA3 LINE L1 5906 6152 -3 36 40 0 0 chr17 67728344 67728394 -21776159 + AT_rich Low_complexity Low_complexity 1 50 0 2083 158 0 0 chr17 67728541 67728851 -21775702 - AluSg SINE Alu 0 310 1 2120 97 4 0 chr17 67729056 67729354 -21775199 - AluSg SINE Alu 0 299 1 388 302 147 16 chr17 67729357 67729486 -21775067 - MIR3 SINE MIR -61 147 2 208 93 23 23 chr17 67729659 67729702 -21774851 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 583 191 8 38 chr17 67729792 67729923 -21774630 - FAM SINE Alu -5 44 1 2134 143 0 0 chr17 67729948 67730248 -21774305 - AluSx SINE Alu -12 300 1 1681 154 25 68 chr17 67730254 67730579 -21773974 - AluJb SINE Alu -1 311 1 39 38 0 0 chr17 67730772 67730825 -21773728 + AT_rich Low_complexity Low_complexity 1 53 0 1560 106 5 0 chr17 67730944 67731151 -21773402 + AluSg/x SINE Alu 83 290 -22 3181 261 63 54 chr17 67731151 67731381 -21773172 - L2 LINE L2 -462 2852 2625 1790 149 46 0 chr17 67731381 67731662 -21772891 + AluSx SINE Alu 1 294 -18 2256 63 42 3 chr17 67731667 67731954 -21772599 + AluY SINE Alu 1 298 -13 240 35 0 0 chr17 67731954 67731983 -21772570 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 3181 261 63 54 chr17 67731983 67732592 -21771961 - L2 LINE L2 -692 2622 1991 1270 240 141 36 chr17 67732592 67733033 -21771520 - LTR16C LTR ERVL -4 487 1 3181 261 63 54 chr17 67733033 67733344 -21771209 - L2 LINE L2 -1323 1991 1684 986 289 56 7 chr17 67733355 67733639 -21770914 - L2 LINE L2 -1942 1372 1075 294 278 41 0 chr17 67733761 67733858 -21770695 - HAL1 LINE L1 -861 1646 1546 2432 76 0 3 chr17 67733863 67734164 -21770389 - AluY SINE Alu -11 300 1 648 200 140 0 chr17 67734341 67734491 -21770062 - LTR50 LTR ERVL -619 176 6 228 184 0 0 chr17 67734846 67734895 -21769658 + (CA)n Simple_repeat Simple_repeat 1 49 0 183 42 0 0 chr17 67734971 67734995 -21769558 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2103 114 4 0 chr17 67735001 67735282 -21769271 - AluSx SINE Alu -30 282 1 564 253 84 16 chr17 67735305 67735647 -21768906 - L1MEd LINE L1 -4864 1255 979 1766 162 7 40 chr17 67735804 67736107 -21768446 - AluSx SINE Alu -19 293 1 246 265 50 50 chr17 67736529 67736619 -21767934 - L1M4 LINE L1 -3244 2902 2813 1931 112 41 0 chr17 67736619 67736951 -21767602 - AluSc SINE Alu 0 343 1 246 265 50 50 chr17 67736951 67737059 -21767494 - L1M4 LINE L1 -3332 2814 2703 2184 113 3 0 chr17 67737103 67737395 -21767158 - AluSx SINE Alu -19 293 1 294 263 212 10 chr17 67737549 67737648 -21766905 - L2 LINE L2 0 3272 3154 220 226 0 32 chr17 67737739 67737801 -21766752 + GA-rich Low_complexity Low_complexity 3 62 0 1693 177 0 7 chr17 67737988 67738276 -21766277 + AluJo SINE Alu 1 286 -26 312 70 0 0 chr17 67738279 67738322 -21766231 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 369 0 0 0 chr17 67738365 67738406 -21766147 + (CA)n Simple_repeat Simple_repeat 2 42 0 252 213 55 16 chr17 67738406 67738536 -21766017 + (TA)n Simple_repeat Simple_repeat 1 124 -413 2759 77 8 0 chr17 67738536 67738888 -21765665 + THE1A LTR MaLR 1 355 0 252 213 55 16 chr17 67738888 67738923 -21765630 + (TA)n Simple_repeat Simple_repeat 124 537 0 208 337 0 12 chr17 67739435 67739521 -21765032 + GA-rich Low_complexity Low_complexity 1 85 0 200 233 70 0 chr17 67739871 67739914 -21764639 - L2 LINE L2 -5 3308 3263 408 285 124 11 chr17 67740040 67740226 -21764327 - L1ME4a LINE L1 -199 5922 5716 24 0 0 0 chr17 67740346 67740370 -21764183 + AT_rich Low_complexity Low_complexity 1 24 0 638 136 220 0 chr17 67740477 67740595 -21763958 + FRAM SINE Alu 9 152 -24 21 36 0 0 chr17 67740595 67740623 -21763930 + AT_rich Low_complexity Low_complexity 1 28 0 2362 99 51 25 chr17 67740637 67740992 -21763561 - THE1B LTR MaLR 0 364 1 1103 81 0 34 chr17 67741163 67741312 -21763241 - AluSp/q SINE Alu 0 313 170 297 100 0 0 chr17 67741412 67741452 -21763101 + AluSg/x SINE Alu 212 251 -49 25 0 0 0 chr17 67741456 67741481 -21763072 + AT_rich Low_complexity Low_complexity 1 25 0 674 242 6 0 chr17 67741481 67741663 -21762890 - Charlie4 DNA MER1_type -1705 256 74 835 156 0 15 chr17 67741672 67741807 -21762746 + FLAM_C SINE Alu 1 133 0 30 0 0 24 chr17 67741807 67741820 -21762733 + AT_rich Low_complexity Low_complexity 1 13 -27 2329 92 0 0 chr17 67741820 67742114 -21762439 + AluY SINE Alu 1 294 -17 30 0 0 24 chr17 67742114 67742141 -21762412 + AT_rich Low_complexity Low_complexity 13 40 0 321 292 106 40 chr17 67742225 67742330 -21762223 - L1ME4a LINE L1 -846 5300 5203 1116 170 9 13 chr17 67742330 67742554 -21761999 - L1MB8 LINE L1 0 6178 5956 321 292 106 40 chr17 67742554 67742722 -21761831 - L1ME4a LINE L1 -943 5203 5009 13267 199 17 45 chr17 67743922 67745203 -21759350 - L1PB1 LINE L1 0 6151 4836 770 115 98 0 chr17 67745203 67745325 -21759228 - AluSq/x SINE Alu -179 134 1 13267 199 17 45 chr17 67745325 67748095 -21756458 - L1PB1 LINE L1 -1315 4836 2103 222 37 0 0 chr17 67748095 67748122 -21756431 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 13267 199 17 45 chr17 67748122 67748635 -21755918 - L1PB1 LINE L1 -4048 2103 1577 1409 168 4 8 chr17 67748646 67748884 -21755669 + AluJo SINE Alu 61 297 -15 2441 93 3 0 chr17 67748889 67749199 -21755354 + AluSp SINE Alu 1 311 -2 2176 107 18 0 chr17 67749403 67749725 -21754828 + AluSq SINE Alu 1 327 0 319 296 35 9 chr17 67749989 67750104 -21754449 - L1MC4 LINE L1 -6 8036 7919 183 129 0 0 chr17 67750107 67750138 -21754415 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1234 137 0 0 chr17 67750538 67750713 -21753840 - AluSg/x SINE Alu -11 299 125 1347 99 0 5 chr17 67750721 67750912 -21753641 - AluSg/x SINE Alu 0 312 123 21 89 0 0 chr17 67750912 67750968 -21753585 + AT_rich Low_complexity Low_complexity 1 56 0 1319 174 0 5 chr17 67750998 67751217 -21753336 - AluSx SINE Alu -94 218 1 200 336 0 82 chr17 67751502 67751624 -21752929 - L2 LINE L2 -20 3252 3141 1697 140 47 4 chr17 67752199 67752477 -21752076 + AluJo SINE Alu 1 290 -22 2313 81 3 0 chr17 67752619 67752938 -21751615 - AluSq SINE Alu 0 320 1 2194 94 42 0 chr17 67753249 67753536 -21751017 + AluSg SINE Alu 1 299 -11 1484 177 0 0 chr17 67754412 67754638 -21749915 + AluJo SINE Alu 1 226 -86 399 286 50 34 chr17 67755399 67755731 -21748822 + L1ME LINE L1 5254 5591 -571 428 274 82 22 chr17 67755806 67755941 -21748612 + MIR3 SINE MIR 49 191 -17 36157 83 12 17 chr17 67756062 67762264 -21742289 + L1PA8 LINE L1 3 6171 -1 24 32 0 0 chr17 67762342 67762373 -21742180 + AT_rich Low_complexity Low_complexity 1 31 0 577 176 81 7 chr17 67762475 67762623 -21741930 - Charlie4 DNA MER1_type 0 1961 1803 1519 107 5 0 chr17 67762676 67762872 -21741681 - AluSg/x SINE Alu -15 297 101 305 202 0 64 chr17 67762975 67763084 -21741469 + L1MEc LINE L1 789 890 -5506 1182 158 0 0 chr17 67763094 67763259 -21741294 + AluSx SINE Alu 11 175 -137 1733 164 131 6 chr17 67763362 67763721 -21740832 - LTR64 LTR ERVK -154 404 1 283 250 190 35 chr17 67764704 67764820 -21739733 - MIR SINE MIR -96 166 33 393 273 279 0 chr17 67766641 67766824 -21737729 + MIR SINE MIR 29 262 0 769 41 20 10 chr17 67767653 67767786 -21736767 - L1PA10 LINE L1 0 6168 6059 259 382 29 0 chr17 67768990 67769092 -21735461 - MIR SINE MIR -98 164 60 2711 188 60 8 chr17 67771840 67772426 -21732127 - MER45B DNA AcHobo -200 840 225 518 233 17 0 chr17 67772423 67772543 -21732010 - MER45B DNA AcHobo -917 123 2 * 1222 139 279 18 chr17 67773204 67773484 -21731069 + Tigger7 DNA MER2_type 2135 2487 0 367 308 96 0 chr17 67773554 67773700 -21730853 + MIR SINE MIR 43 202 -60 329 245 41 10 chr17 67774308 67774406 -21730147 - Charlie4 DNA MER1_type 0 1961 1861 200 276 17 17 chr17 67775625 67775683 -21728870 + L2 LINE L2 3215 3272 0 21 57 0 0 chr17 67776350 67776385 -21728168 + AT_rich Low_complexity Low_complexity 1 35 0 379 301 59 54 chr17 67776583 67776769 -21727784 + MER5A DNA MER1_type 1 187 -2 212 296 28 28 chr17 67777851 67777922 -21726631 - L2 LINE L2 -95 3177 3107 199 231 0 19 chr17 67777933 67777985 -21726568 + MIR SINE MIR 81 131 -77 1750 200 10 0 chr17 67778097 67778402 -21726151 - AluJo SINE Alu -4 308 1 466 323 38 0 chr17 67778943 67779101 -21725452 - MIR3 SINE MIR -1 207 44 2658 55 0 0 chr17 67779286 67779595 -21724958 + AluY SINE Alu 1 309 -2 52 57 0 9 chr17 67780171 67780243 -21724310 + AT_rich Low_complexity Low_complexity 1 73 -31 934 224 12 0 chr17 67780243 67780408 -21724145 - FAM SINE Alu -8 167 1 52 57 0 9 chr17 67780408 67780440 -21724113 + AT_rich Low_complexity Low_complexity 73 104 0 2156 147 3 0 chr17 67780440 67780746 -21723807 + AluSx SINE Alu 1 307 -5 491 301 153 0 chr17 67780846 67781042 -21723511 - MIR SINE MIR -16 246 21 605 167 0 23 chr17 67781261 67781393 -21723160 - L1MB3 LINE L1 -3 6180 6052 2198 120 0 7 chr17 67781400 67781700 -21722853 - AluSp SINE Alu -15 298 1 335 210 65 0 chr17 67781712 67781774 -21722779 - L2 LINE L2 -1 3271 3206 2019 135 10 3 chr17 67782453 67782750 -21721803 - AluSx SINE Alu -13 299 1 2178 120 7 0 chr17 67782778 67783069 -21721484 - AluSg SINE Alu -17 293 1 2414 84 0 3 chr17 67783248 67783545 -21721008 - AluSq SINE Alu -17 296 1 1991 89 100 4 chr17 67783722 67784003 -21720550 + AluY SINE Alu 1 308 -3 2579 77 0 0 chr17 67784754 67785065 -21719488 - AluY SINE Alu 0 311 1 2089 103 0 20 chr17 67785113 67785405 -21719148 - AluSc SINE Alu -23 286 1 180 179 154 0 chr17 67785657 67785696 -21718857 - L2 LINE L2 -12 3301 3257 2283 96 3 3 chr17 67785957 67786260 -21718293 + AluSg SINE Alu 1 303 -7 968 102 0 0 chr17 67786331 67786458 -21718095 + AluSg/x SINE Alu 150 276 -36 383 105 0 0 chr17 67786559 67786616 -21717937 - AluSg/x SINE Alu -66 234 178 734 179 0 0 chr17 67786616 67786733 -21717820 + AluSg/x SINE Alu 162 278 -32 261 0 0 0 chr17 67786736 67786765 -21717788 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 214 316 110 29 chr17 67786765 67786901 -21717652 - MIR3 SINE MIR -43 165 19 2100 109 0 30 chr17 67786952 67787255 -21717298 + AluSx SINE Alu 1 294 -18 24 67 0 0 chr17 67788252 67788297 -21716256 + GC_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr17 67788487 67788508 -21716045 + GC_rich Low_complexity Low_complexity 1 21 0 238 309 0 0 chr17 67788837 67788921 -21715632 + C-rich Low_complexity Low_complexity 1 84 0 39 22 0 0 chr17 67789165 67789211 -21715342 + GC_rich Low_complexity Low_complexity 1 46 0 27 29 0 0 chr17 67789280 67789314 -21715239 + GC_rich Low_complexity Low_complexity 1 34 0 180 0 0 0 chr17 67789421 67789441 -21715112 + (CGG)n Simple_repeat Simple_repeat 3 22 0 2341 88 0 10 chr17 67792104 67792401 -21712152 - AluSq SINE Alu -19 294 1 2197 122 0 7 chr17 67792601 67792904 -21711649 - AluSx SINE Alu -11 301 1 335 210 65 0 chr17 67792916 67792978 -21711575 - L2 LINE L2 -1 3271 3206 2019 135 10 3 chr17 67793658 67793955 -21710598 - AluSx SINE Alu -13 299 1 2178 120 7 0 chr17 67793983 67794274 -21710279 - AluSg SINE Alu -17 293 1 1335 86 0 0 chr17 67794453 67794616 -21709937 - AluSq SINE Alu -17 296 134 1769 167 27 0 chr17 67794616 67794909 -21709644 - AluSq SINE Alu -12 301 1 214 316 110 29 chr17 67794960 67795096 -21709457 + MIR3 SINE MIR 19 165 -43 261 0 0 0 chr17 67795096 67795125 -21709428 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1994 117 0 11 chr17 67795128 67795409 -21709144 - AluSg SINE Alu -32 278 1 2167 136 0 7 chr17 67795431 67795739 -21708814 + AluSx SINE Alu 1 306 -6 2343 65 3 7 chr17 67795751 67796044 -21708509 + AluY SINE Alu 1 292 -19 1950 116 10 14 chr17 67796066 67796358 -21708195 + AluSg SINE Alu 1 291 -19 199 306 73 40 chr17 67796449 67796573 -21707980 + MIR SINE MIR 116 243 -19 557 153 0 0 chr17 67796651 67796736 -21707817 - AluSg/x SINE Alu -16 294 210 770 197 0 29 chr17 67796746 67796883 -21707670 + FLAM_A SINE Alu 1 133 0 1527 172 16 48 chr17 67796885 67797002 -21707551 + AluJb SINE Alu 1 120 -192 2204 94 10 10 chr17 67797002 67797309 -21707244 + AluY SINE Alu 1 307 -4 1527 172 16 48 chr17 67797309 67797333 -21707220 + AluJb SINE Alu 120 143 -169 2334 96 0 6 chr17 67797333 67797646 -21706907 + AluY SINE Alu 1 311 0 1527 172 16 48 chr17 67797646 67797817 -21706736 + AluJb SINE Alu 143 304 -8 674 199 21 7 chr17 67797868 67798009 -21706544 - MER58A DNA MER1_type -46 178 36 1040 158 27 11 chr17 67798032 67798216 -21706337 - MER5A DNA MER1_type -2 187 1 2202 112 0 0 chr17 67798958 67799254 -21705299 - AluY SINE Alu -15 296 1 2480 70 0 25 chr17 67799506 67799822 -21704731 + AluY SINE Alu 2 309 -2 589 321 121 5 chr17 67800495 67800710 -21703843 + MIR SINE MIR 1 240 -22 1533 151 102 39 chr17 67800877 67801162 -21703391 + AluJo SINE Alu 1 303 -9 2006 132 0 7 chr17 67801167 67801454 -21703099 + AluSx SINE Alu 1 285 -27 369 0 0 0 chr17 67801458 67801499 -21703054 + (CA)n Simple_repeat Simple_repeat 1 41 0 2356 100 0 3 chr17 67801512 67801813 -21702740 + AluSg SINE Alu 1 300 -10 2362 86 10 19 chr17 67802086 67802399 -21702154 - AluSp SINE Alu 0 313 4 2314 110 3 0 chr17 67802417 67802727 -21701826 - AluY SINE Alu 0 311 1 2232 121 0 10 chr17 67802765 67803070 -21701483 - AluSx SINE Alu -10 302 1 356 49 0 183 chr17 67803162 67803214 -21701339 - MER41A LTR ERV1 -88 466 433 2395 80 0 13 chr17 67803214 67803515 -21701038 + AluSg1 SINE Alu 2 298 -11 356 49 0 183 chr17 67803515 67803544 -21701009 - MER41A LTR ERV1 -121 433 400 360 234 26 0 chr17 67803635 67803712 -21700841 - MIR3 SINE MIR -32 176 98 2298 71 21 0 chr17 67804171 67804454 -21700099 - AluY SINE Alu -22 289 1 2495 82 0 0 chr17 67804456 67804762 -21699791 - AluSx SINE Alu -5 307 2 1179 91 0 0 chr17 67804764 67804907 -21699646 - AluSq/x SINE Alu -169 143 1 997 130 6 25 chr17 67804910 67805071 -21699482 - AluSg/x SINE Alu -20 290 133 189 0 0 0 chr17 67805071 67805092 -21699461 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2374 72 0 7 chr17 67805094 67805385 -21699168 - AluSq SINE Alu -24 289 1 328 250 167 38 chr17 67805402 67805666 -21698887 - L1MC4 LINE L1 -10 8032 7735 812 161 67 20 chr17 67805666 67805815 -21698738 + FRAM SINE Alu 1 156 -20 232 206 0 0 chr17 67805817 67805880 -21698673 - L1MC4 LINE L1 -291 7751 7689 881 140 7 7 chr17 67805900 67806036 -21698517 - FRAM SINE Alu -18 158 23 193 366 46 0 chr17 67806110 67806221 -21698332 + L2 LINE L2 1821 1940 -1374 2202 104 40 0 chr17 67806221 67806519 -21698034 + AluSq SINE Alu 2 311 -2 193 366 46 0 chr17 67806519 67806538 -21698015 + L2 LINE L2 1940 1957 -1357 565 313 178 27 chr17 67806607 67807310 -21697243 + L2 LINE L2 2168 2976 -338 355 152 0 0 chr17 67807552 67807618 -21696935 + ORSL DNA AcHobo 167 232 -43 1048 157 35 0 chr17 67807952 67808124 -21696429 - AluY SINE Alu -1 310 133 2180 110 0 28 chr17 67808124 67808303 -21696250 - AluSx SINE Alu -2 310 142 2497 76 0 0 chr17 67808303 67808606 -21695947 - AluY SINE Alu -8 303 1 2180 110 0 28 chr17 67808606 67808745 -21695808 - AluSx SINE Alu -170 142 1 2218 123 3 3 chr17 67808755 67809055 -21695498 - AluSx SINE Alu -12 300 1 236 327 47 19 chr17 67809060 67809167 -21695386 - MIR SINE MIR -107 155 46 353 337 28 22 chr17 67809175 67809356 -21695197 - L2 LINE L2 -950 2364 2183 457 247 27 48 chr17 67809650 67809796 -21694757 - L2 LINE L2 -7 3306 3164 2149 118 17 0 chr17 67809827 67810115 -21694438 + AluSq SINE Alu 1 293 -20 390 187 19 19 chr17 67810115 67810222 -21694331 + GA-rich Low_complexity Low_complexity 1 107 0 923 128 0 0 chr17 67810434 67810559 -21693994 + AluSq SINE Alu 117 241 -72 236 307 0 53 chr17 67810573 67810594 -21693959 + GA-rich Low_complexity Low_complexity 3 24 -86 1513 169 24 82 chr17 67810594 67810925 -21693628 + AluJo SINE Alu 1 312 0 236 307 0 53 chr17 67810925 67811017 -21693536 + GA-rich Low_complexity Low_complexity 24 110 0 348 213 0 25 chr17 67811025 67811105 -21693448 - MER45A DNA AcHobo 0 178 101 2398 98 0 16 chr17 67811108 67811245 -21693308 + AluSx SINE Alu 1 139 -173 2252 107 0 10 chr17 67811245 67811568 -21692985 + AluSg SINE Alu 1 310 0 2398 98 0 16 chr17 67811568 67811746 -21692807 + AluSx SINE Alu 139 311 -1 1037 71 0 101 chr17 67811762 67811931 -21692622 + AluSg/x SINE Alu 159 310 0 281 207 219 0 chr17 67811953 67812035 -21692518 - MER45A DNA AcHobo -71 107 8 2420 52 23 33 chr17 67812084 67812389 -21692164 + AluY SINE Alu 3 304 -7 404 266 29 36 chr17 67812770 67812909 -21691644 + MIR SINE MIR 76 213 -49 2134 122 0 7 chr17 67813383 67813679 -21690874 + AluJb SINE Alu 1 294 -18 221 266 92 60 chr17 67813836 67814054 -21690499 + L2 LINE L2 3023 3247 -66 371 224 24 0 chr17 67814054 67814139 -21690414 - MER113 DNA MER1_type? -231 290 204 717 152 0 139 chr17 67814146 67814311 -21690242 - FLAM_C SINE Alu 0 143 2 274 204 44 102 chr17 67814318 67814398 -21690155 - MER113 DNA MER1_type? -322 199 116 2305 92 3 7 chr17 67814398 67814704 -21689849 + AluSc SINE Alu 1 305 -4 274 204 44 102 chr17 67814704 67814737 -21689816 - MER113 DNA MER1_type? -405 116 83 1752 111 50 54 chr17 67814737 67815034 -21689519 - AluSx SINE Alu -16 296 1 274 204 44 102 chr17 67815034 67815125 -21689428 - MER113 DNA MER1_type? -438 83 6 2068 126 0 3 chr17 67815631 67815917 -21688636 - AluSx SINE Alu -27 285 1 1936 137 49 0 chr17 67815917 67816202 -21688351 - AluSq SINE Alu -10 303 5 192 200 0 0 chr17 67816391 67816431 -21688122 + CT-rich Low_complexity Low_complexity 3 42 0 1215 115 11 0 chr17 67816433 67816607 -21687946 - AluSg/x SINE Alu -7 305 130 1841 149 35 3 chr17 67816610 67816967 -21687586 - AluJo SINE Alu 0 366 1 2097 89 30 26 chr17 67817973 67818275 -21686278 - AluSx SINE Alu -9 303 1 1756 128 84 0 chr17 67818810 67819084 -21685469 + AluJb SINE Alu 1 297 -15 1763 204 186 2 chr17 67819106 67819616 -21684937 + L1MC4 LINE L1 7048 7651 -391 2119 113 19 10 chr17 67819620 67819800 -21684753 - AluSq SINE Alu 0 313 127 2380 90 7 0 chr17 67819800 67820101 -21684452 - AluSp SINE Alu -10 303 1 2119 113 19 10 chr17 67820101 67820230 -21684323 - AluSq SINE Alu -186 127 1 844 158 5 97 chr17 67820357 67820553 -21684000 - AluJo SINE Alu -121 191 14 2040 103 4 0 chr17 67820610 67820897 -21683656 - AluSx SINE Alu 0 309 22 25 0 0 0 chr17 67820900 67820925 -21683628 + AT_rich Low_complexity Low_complexity 1 25 0 1903 113 0 12 chr17 67820936 67821192 -21683361 + AluSx SINE Alu 1 253 -59 25 0 0 0 chr17 67821196 67821221 -21683332 + AT_rich Low_complexity Low_complexity 1 25 0 884 203 7 114 chr17 67821221 67821412 -21683141 - Charlie4 DNA MER1_type -252 256 46 889 156 0 15 chr17 67821412 67821547 -21683006 + FLAM_C SINE Alu 1 133 0 884 203 7 114 chr17 67821547 67821560 -21682993 - Charlie4 DNA MER1_type -462 46 33 2457 76 0 0 chr17 67821560 67821863 -21682690 + AluY SINE Alu 1 303 -8 884 203 7 114 chr17 67821863 67821938 -21682615 - Charlie4 DNA MER1_type -475 33 6 415 293 56 10 chr17 67821940 67822138 -21682415 + L2 LINE L2 697 903 -2411 2204 92 23 23 chr17 67822351 67822646 -21681907 + AluSg SINE Alu 1 298 -12 438 20 0 0 chr17 67822646 67822697 -21681856 + (CA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr17 67822799 67822824 -21681729 + AT_rich Low_complexity Low_complexity 1 25 0 4189 294 95 31 chr17 67823020 67824045 -21680508 + L2 LINE L2 905 1864 -1449 2155 116 0 7 chr17 67824045 67824347 -21680206 + AluJb SINE Alu 1 300 -12 4189 294 95 31 chr17 67824347 67825586 -21678967 + L2 LINE L2 1864 3311 -2 2257 118 3 3 chr17 67825812 67826117 -21678436 + AluSx SINE Alu 1 305 -7 601 139 43 26 chr17 67826409 67826524 -21678029 + L1PA7 LINE L1 6038 6154 0 291 302 0 0 chr17 67826614 67826700 -21677853 + L1ME LINE L1 5578 5663 -458 2273 116 0 3 chr17 67827433 67827735 -21676818 + AluSq SINE Alu 1 301 -12 636 217 99 25 chr17 67827806 67827866 -21676687 - MER5A DNA MER1_type -6 183 129 1814 178 0 23 chr17 67827866 67828175 -21676378 + AluJo SINE Alu 1 302 -10 636 217 99 25 chr17 67828175 67828275 -21676278 - MER5A DNA MER1_type -60 129 11 2334 82 3 10 chr17 67828334 67828640 -21675913 + AluSx SINE Alu 2 305 -7 392 316 18 9 chr17 67829045 67829159 -21675394 - L2 LINE L2 0 3272 3158 1969 119 0 35 chr17 67829332 67829642 -21674911 - AluJb SINE Alu -13 299 1 1998 138 7 3 chr17 67830060 67830357 -21674196 + AluSx SINE Alu 1 298 -14 1695 139 7 32 chr17 67830393 67830673 -21673880 + AluJb SINE Alu 2 274 -38 23 33 0 0 chr17 67830936 67830966 -21673587 + AT_rich Low_complexity Low_complexity 1 30 0 313 250 9 26 chr17 67830995 67831111 -21673442 - L1ME4a LINE L1 -3 6118 6005 2360 100 0 0 chr17 67831240 67831540 -21673013 + AluSx SINE Alu 1 300 -12 1793 187 0 3 chr17 67831893 67832192 -21672361 + AluJb SINE Alu 2 299 -13 203 268 175 41 chr17 67832502 67832599 -21671954 - L2 LINE L2 -5 3308 3199 195 182 0 0 chr17 67832607 67832640 -21671913 + L2 LINE L2 3271 3303 -10 242 256 0 70 chr17 67832878 67833007 -21671546 + CT-rich Low_complexity Low_complexity 1 120 0 2100 97 32 0 chr17 67833252 67833531 -21671022 + AluSx SINE Alu 1 288 -24 194 349 0 0 chr17 67835409 67835475 -21669078 + MIR SINE MIR 87 152 -56 1349 207 3 33 chr17 67835477 67835776 -21668777 + AluJo SINE Alu 1 290 -22 1636 57 0 38 chr17 67835785 67835995 -21668558 + L1PA7 LINE L1 5950 6151 -3 482 272 7 0 chr17 67836065 67836201 -21668352 + L1M4 LINE L1 5161 5297 -849 1751 158 27 10 chr17 67836201 67836498 -21668055 + AluJb SINE Alu 1 302 -10 2200 111 3 7 chr17 67837065 67837363 -21667190 - AluSx SINE Alu -15 297 1 3822 33 0 0 chr17 67838059 67838485 -21666068 - L1PA4 LINE L1 0 6155 5730 2208 112 65 29 chr17 67839379 67839763 -21664790 - L1MA9 LINE L1 -46 6266 5869 410 113 16 16 chr17 67840166 67840228 -21664325 + U7 snRNA snRNA 2 63 0 2295 104 0 0 chr17 67840255 67840543 -21664010 + AluSc SINE Alu 1 288 -21 474 254 169 0 chr17 67841167 67841297 -21663256 + L3 LINE CR1 1415 1566 -11 1598 167 87 11 chr17 67841415 67841691 -21662862 + AluJb SINE Alu 1 297 -15 2469 137 22 3 chr17 67841805 67842164 -21662389 + MER47A DNA MER2_type 1 366 0 1735 200 7 0 chr17 67842223 67842528 -21662025 + AluJb SINE Alu 1 307 -5 2389 82 0 25 chr17 67842772 67843088 -21661465 - AluY SINE Alu -3 308 1 26 50 0 0 chr17 67843184 67843224 -21661329 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr17 67843250 67843278 -21661275 + AT_rich Low_complexity Low_complexity 1 28 0 535 250 0 16 chr17 67843712 67843836 -21660717 + MIR SINE MIR 29 150 -112 1870 159 0 23 chr17 67843845 67844153 -21660400 - AluJo SINE Alu -11 301 1 389 279 108 132 chr17 67844852 67844985 -21659568 - L2 LINE L2 0 3272 3137 2289 81 0 20 chr17 67844985 67845283 -21659270 + AluSx SINE Alu 2 293 -19 389 279 108 132 chr17 67845283 67845558 -21658995 - L2 LINE L2 -135 3137 2874 461 176 24 0 chr17 67845669 67845754 -21658799 - MER74A LTR ERVL -462 96 10 2393 190 33 46 chr17 67845988 67846530 -21658023 - MER74A LTR ERVL -14 544 10 574 238 73 7 chr17 67846605 67846756 -21657797 + L2 LINE L2 1337 1497 -1817 586 102 7 80 chr17 67846769 67846864 -21657689 + L1MC3 LINE L1 6937 7037 -748 191 61 30 0 chr17 67846864 67846897 -21657656 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2133 60 0 0 chr17 67846899 67847147 -21657406 - AluY SINE Alu -63 248 1 586 102 7 80 chr17 67847147 67847185 -21657368 + L1MC3 LINE L1 7038 7063 -722 888 303 62 9 chr17 67847186 67847506 -21657047 - L2 LINE L2 -1556 1758 1422 409 302 154 6 chr17 67847536 67847705 -21656848 + L2 LINE L2 3113 3306 -7 200 274 120 51 chr17 67847681 67847798 -21656755 - L2 LINE L2 -7 3306 3182 * 2232 180 132 68 chr17 67848087 67848671 -21655882 - MLT1E2 LTR MaLR -3 623 3 436 174 13 20 chr17 67849141 67849290 -21655263 + (TA)n Simple_repeat Simple_repeat 2 149 0 230 211 0 137 chr17 67849294 67849389 -21655164 + L1MC4 LINE L1 6614 6695 -1347 2511 64 0 0 chr17 67849702 67849998 -21654555 - AluY SINE Alu -15 296 1 192 252 76 59 chr17 67850064 67850183 -21654370 + L2 LINE L2 2530 2650 -664 25 0 0 0 chr17 67850553 67850578 -21653975 + AT_rich Low_complexity Low_complexity 1 25 0 2477 70 3 0 chr17 67851013 67851314 -21653239 - AluY SINE Alu -9 302 1 21 0 0 0 chr17 67851366 67851387 -21653166 + AT_rich Low_complexity Low_complexity 1 21 0 664 199 90 19 chr17 67853121 67853277 -21651276 + MIR SINE MIR 96 262 0 2392 97 0 3 chr17 67853334 67853645 -21650908 + AluSg SINE Alu 1 310 0 1319 203 58 7 chr17 67853672 67853963 -21650590 + AluJo SINE Alu 1 306 -6 558 275 115 0 chr17 67853978 67854160 -21650393 - MIR SINE MIR -58 204 2 659 133 0 0 chr17 67854333 67854423 -21650130 + AluJb SINE Alu 35 124 -188 2370 82 7 7 chr17 67854804 67855108 -21649445 + AluSq SINE Alu 1 304 -9 2127 145 0 0 chr17 67855233 67855536 -21649017 + AluSx SINE Alu 1 303 -9 984 194 11 0 chr17 67855568 67855748 -21648805 + AluJb SINE Alu 120 301 -11 189 0 0 0 chr17 67855764 67855785 -21648768 + (CA)n Simple_repeat Simple_repeat 2 22 0 1606 245 87 46 chr17 67856090 67856250 -21648303 + L2 LINE L2 2600 2752 -561 1692 155 87 0 chr17 67856250 67856527 -21648026 - AluJb SINE Alu -11 301 1 1606 245 87 46 chr17 67856527 67857061 -21647492 + L2 LINE L2 2752 3307 -6 391 169 36 36 chr17 67857065 67857148 -21647405 - MIR SINE MIR -72 190 108 463 279 74 98 chr17 67857159 67857290 -21647263 + L2 LINE L2 2244 2377 -937 17955 42 1 0 chr17 67857290 67860182 -21644371 - L1PA5 LINE L1 0 6154 3321 463 279 74 98 chr17 67860182 67860508 -21644045 + L2 LINE L2 2377 2690 -624 1641 161 0 45 chr17 67860719 67861011 -21643542 - AluJb SINE Alu -33 279 1 625 200 0 9 chr17 67861162 67861272 -21643281 + 7SLRNA srpRNA srpRNA 1 109 -211 1475 172 39 0 chr17 67861302 67861558 -21642995 + AluJo SINE Alu 22 287 -25 2315 91 3 0 chr17 67861576 67861885 -21642668 + AluSp SINE Alu 1 310 0 544 194 69 49 chr17 67862026 67862170 -21642383 - MER5A DNA MER1_type -5 184 38 357 245 112 14 chr17 67862881 67863024 -21641529 + L1ME4a LINE L1 5964 6120 -1 741 184 7 29 chr17 67863149 67863285 -21641268 + FLAM_A SINE Alu 1 133 0 339 266 77 35 chr17 67865177 67865320 -21639233 + L2 LINE L2 3165 3313 0 1033 278 68 36 chr17 67865380 67865576 -21638977 + L2 LINE L2 2601 2789 -524 1094 185 34 15 chr17 67865576 67865781 -21638772 - MER3 DNA MER1_type 0 209 1 1033 278 68 36 chr17 67865781 67866047 -21638506 + L2 LINE L2 2789 3081 -232 454 127 13 13 chr17 67866047 67866126 -21638427 + L1MB5 LINE L1 6088 6166 -8 2210 117 3 0 chr17 67866128 67866418 -21638135 - AluSx SINE Alu -21 291 1 52 57 0 9 chr17 67866418 67866450 -21638103 + AT_rich Low_complexity Low_complexity 1 32 -72 987 218 12 0 chr17 67866450 67866615 -21637938 + FAM SINE Alu 1 167 -8 52 57 0 9 chr17 67866615 67866687 -21637866 + AT_rich Low_complexity Low_complexity 32 104 0 312 209 21 59 chr17 67866779 67866966 -21637587 + (TA)n Simple_repeat Simple_repeat 1 180 0 2348 103 3 0 chr17 67866979 67867279 -21637274 + AluSp SINE Alu 1 301 -12 964 112 0 0 chr17 67867301 67867426 -21637127 + AluJb SINE Alu 1 125 -187 842 195 0 0 chr17 67867534 67867662 -21636891 + AluJb SINE Alu 2 129 -183 453 324 83 45 chr17 67867989 67868301 -21636252 + L1MEd LINE L1 436 759 -5360 243 217 0 33 chr17 67868401 67868461 -21636092 + L1MEd LINE L1 1180 1237 -4882 2097 139 7 3 chr17 67868548 67868857 -21635696 + AluSx SINE Alu 1 310 -2 810 102 0 0 chr17 67868864 67868982 -21635571 + (GGAA)n Simple_repeat Simple_repeat 4 121 0 276 281 140 12 chr17 67868983 67869154 -21635399 + HAL1 LINE L1 1450 1642 -865 2275 82 48 0 chr17 67869155 67869447 -21635106 + AluSx SINE Alu 1 306 -6 1842 147 18 3 chr17 67869525 67869810 -21634743 - AluJb SINE Alu -12 300 12 380 321 129 42 chr17 67869836 67870222 -21634331 + L1MC/D LINE L1 4747 5166 -980 723 237 208 23 chr17 67870275 67870621 -21633932 + L1MC/D LINE L1 5272 5681 -2127 367 277 120 107 chr17 67871388 67871645 -21632908 + L2 LINE L2 2173 2425 -889 261 0 0 0 chr17 67871645 67871674 -21632879 + (TG)n Simple_repeat Simple_repeat 2 30 0 450 113 0 0 chr17 67871684 67871746 -21632807 - L1PA16 LINE L1 -11 6155 6094 367 277 120 107 chr17 67871746 67871883 -21632670 + L2 LINE L2 2433 2567 -747 2309 119 0 0 chr17 67871883 67872195 -21632358 + AluSx SINE Alu 1 312 0 367 277 120 107 chr17 67872195 67872348 -21632205 + L2 LINE L2 2567 2739 -575 321 299 66 70 chr17 67872529 67872800 -21631753 + L2 LINE L2 2838 3107 -165 2264 97 0 7 chr17 67873562 67873860 -21630693 - AluSc SINE Alu -13 296 1 2095 118 0 53 chr17 67874217 67874538 -21630015 + AluSx SINE Alu 1 304 -8 347 99 19 17 chr17 67874558 67874629 -21629924 + Charlie4 DNA MER1_type 1725 1800 -161 366 131 0 0 chr17 67874639 67874700 -21629853 - L1MB4 LINE L1 0 6180 6120 1845 180 0 0 chr17 67874718 67874743 -21629810 - AluJo SINE Alu -1 311 287 264 30 0 0 chr17 67874743 67874776 -21629777 + (TG)n Simple_repeat Simple_repeat 2 34 0 1845 180 0 0 chr17 67874776 67875061 -21629492 - AluJo SINE Alu -24 288 1 226 128 26 0 chr17 67875181 67875220 -21629333 + MER117 DNA MER1_type 4 43 -154 1949 140 0 3 chr17 67875451 67875736 -21628817 - AluSx SINE Alu -28 284 1 408 267 9 17 chr17 67876213 67876329 -21628224 - L2 LINE L2 0 3313 3199 491 260 81 47 chr17 67876342 67876455 -21628098 + L1ME1 LINE L1 5609 5717 -449 2351 105 0 0 chr17 67876455 67876760 -21627793 - AluSg SINE Alu -5 305 1 491 260 81 47 chr17 67876760 67877052 -21627501 + L1ME1 LINE L1 5717 6138 -28 1098 114 0 0 chr17 67877059 67877231 -21627322 - AluSc SINE Alu 0 303 132 2193 93 7 7 chr17 67877231 67877560 -21626993 - AluSp SINE Alu 0 313 2 2155 87 21 0 chr17 67877584 67877870 -21626683 - AluSq SINE Alu -19 294 3 1305 134 0 0 chr17 67878459 67878645 -21625908 - AluJb SINE Alu -7 305 120 359 160 27 53 chr17 67878675 67878750 -21625803 - AluJb SINE Alu -152 150 78 237 65 0 0 chr17 67878808 67878839 -21625714 + (TG)n Simple_repeat Simple_repeat 2 32 0 2104 125 0 26 chr17 67878842 67879147 -21625406 - AluSx SINE Alu -15 297 1 433 176 147 0 chr17 67879151 67879253 -21625300 - L1MC2 LINE L1 -22 6322 6206 667 146 190 0 chr17 67879285 67879443 -21625110 - L1MC2 LINE L1 -22 6322 6135 1997 127 27 3 chr17 67879469 67879768 -21624785 - AluSq SINE Alu -7 306 1 573 317 40 4 chr17 67879768 67880017 -21624536 - L1MEd LINE L1 -4916 1203 946 2372 98 3 0 chr17 67880175 67880480 -21624073 - AluSx SINE Alu -6 306 1 679 188 45 45 chr17 67880540 67880673 -21623880 - FLAM_A SINE Alu 0 133 1 2018 112 17 10 chr17 67881228 67881522 -21623031 - AluSc SINE Alu -13 296 1 2347 82 0 10 chr17 67882096 67882399 -21622154 - AluSx SINE Alu -12 300 1 2307 153 22 62 chr17 67882399 67882456 -21622097 - L1MB3 LINE L1 -123 6060 6002 1957 155 3 7 chr17 67882456 67882765 -21621788 + AluSg SINE Alu 1 308 -2 2307 153 22 62 chr17 67882765 67883171 -21621382 - L1MB3 LINE L1 -181 6002 5616 1604 93 0 5 chr17 67883405 67883609 -21620944 - AluSg/x SINE Alu -19 291 89 2158 128 3 0 chr17 67883727 67884023 -21620530 - AluSx SINE Alu -15 297 1 1209 157 136 75 chr17 67884064 67884344 -21620209 - AluSq SINE Alu -6 297 1 2058 144 0 3 chr17 67884524 67884822 -21619731 + AluSx SINE Alu 1 297 -15 505 161 0 0 chr17 67884858 67884939 -21619614 + AluSp/q SINE Alu 216 296 -17 974 193 0 0 chr17 67885049 67885220 -21619333 - AluSg/x SINE Alu -6 304 134 189 0 0 0 chr17 67885294 67885315 -21619238 + (TA)n Simple_repeat Simple_repeat 1 21 0 1905 125 3 28 chr17 67885317 67885606 -21618947 - AluSx SINE Alu -30 282 1 1179 258 75 16 chr17 67885764 67886140 -21618413 - L1MC2 LINE L1 -1845 5963 5566 2535 66 0 7 chr17 67886314 67886618 -21617935 + AluY SINE Alu 1 302 -9 1461 170 4 47 chr17 67886645 67886922 -21617631 + AluJb SINE Alu 30 294 -18 230 315 76 22 chr17 67887014 67887106 -21617447 + L3 LINE CR1 1437 1533 -44 2216 103 0 3 chr17 67887345 67887636 -21616917 - AluSq SINE Alu -23 290 1 2161 120 0 3 chr17 67888031 67888331 -21616222 - AluSx SINE Alu -13 299 1 1790 155 0 37 chr17 67888493 67888699 -21615854 - AluJb SINE Alu -2 310 119 2044 131 24 0 chr17 67888699 67888990 -21615563 + AluSx SINE Alu 1 298 -14 1790 155 0 37 chr17 67888990 67889105 -21615448 - AluJb SINE Alu -193 119 1 2317 102 0 3 chr17 67889209 67889514 -21615039 + AluSx SINE Alu 2 305 -7 994 167 17 23 chr17 67889713 67889887 -21614666 - AluJo SINE Alu -19 293 121 3365 227 156 77 chr17 67889949 67890597 -21613956 + L1M4 LINE L1 2301 2896 -3250 2416 84 0 0 chr17 67890597 67890896 -21613657 + AluY SINE Alu 1 299 -12 3365 227 156 77 chr17 67890896 67891092 -21613461 + L1M4 LINE L1 2896 3075 -3071 725 163 81 0 chr17 67891092 67891215 -21613338 + AluJo SINE Alu 2 134 -178 3365 227 156 77 chr17 67891215 67891318 -21613235 + L1M4 LINE L1 3075 3168 -2978 1465 145 4 34 chr17 67891318 67891552 -21613001 + AluJo SINE Alu 1 227 -85 3365 227 156 77 chr17 67891552 67892432 -21612121 + L1M4 LINE L1 3168 4406 -1740 322 229 121 12 chr17 67892559 67892642 -21611911 - L2 LINE L2 -35 3278 3187 2428 79 3 0 chr17 67892693 67892998 -21611555 - AluY SINE Alu -5 306 1 1956 152 0 3 chr17 67893056 67893359 -21611194 - AluSx SINE Alu -10 302 1 2413 66 3 20 chr17 67893369 67893674 -21610879 - AluSp SINE Alu -13 300 1 325 276 43 76 chr17 67893842 67894027 -21610526 - MIR SINE MIR -3 259 81 1590 178 3 17 chr17 67894162 67894455 -21610098 + AluJb SINE Alu 1 289 -23 1479 200 48 0 chr17 67894485 67894780 -21609773 - AluSx SINE Alu -3 309 1 1534 223 3 33 chr17 67894892 67895192 -21609361 - AluJo SINE Alu -10 292 2 225 196 0 0 chr17 67895204 67895250 -21609303 + T-rich Low_complexity Low_complexity 1 46 0 1760 142 0 4 chr17 67895373 67895633 -21608920 - AluJb SINE Alu -53 259 1 1089 126 12 6 chr17 67896765 67896932 -21607621 + AluSp SINE Alu 134 301 -12 662 199 135 0 chr17 67896934 67897075 -21607478 - ERVL LTR ERVL -4021 1743 1584 2251 109 0 3 chr17 67898325 67898627 -21605926 + AluSx SINE Alu 1 301 -11 1820 172 0 0 chr17 67898721 67899029 -21605524 - AluJo SINE Alu 0 308 1 315 158 319 45 chr17 67899268 67899430 -21605123 + MLT1A1 LTR MaLR 1 191 -174 864 168 10 69 chr17 67899482 67899638 -21604915 + MLT1A1 LTR MaLR 172 315 -50 1870 135 25 0 chr17 67899638 67899920 -21604633 + AluJb SINE Alu 2 290 -22 864 168 10 69 chr17 67899920 67899966 -21604587 + MLT1A1 LTR MaLR 315 362 -3 548 272 63 6 chr17 67899966 67900124 -21604429 + MIR SINE MIR 5 171 -91 1554 176 87 31 chr17 67900124 67900481 -21604072 - MLT1B LTR MaLR -13 377 1 195 225 310 0 chr17 67900481 67900552 -21604001 + MIR SINE MIR 170 262 0 4092 206 77 47 chr17 67900609 67901020 -21603533 - L1MD2 LINE L1 -16 6343 5946 1974 155 3 0 chr17 67901020 67901310 -21603243 - AluJo SINE Alu -21 291 1 4092 206 77 47 chr17 67901310 67901854 -21602699 - L1MD2 LINE L1 -413 5946 5420 2221 87 37 7 chr17 67901854 67902153 -21602400 - AluSp SINE Alu -5 308 1 4092 206 77 47 chr17 67902153 67902472 -21602081 - L1MD2 LINE L1 -939 5420 4997 2302 87 0 26 chr17 67902472 67902821 -21601732 - AluSq SINE Alu 0 313 1 4092 206 77 47 chr17 67902821 67902935 -21601618 - L1MD2 LINE L1 -1362 4997 4888 1349 148 40 92 chr17 67902960 67903264 -21601289 - AluJo SINE Alu -11 301 14 249 246 0 0 chr17 67903264 67903321 -21601232 - L1MD2 LINE L1 -1259 4887 4831 2100 109 0 7 chr17 67903321 67903629 -21600924 - AluSg1 SINE Alu 0 306 1 28 0 0 26 chr17 67903777 67903790 -21600763 + AT_rich Low_complexity Low_complexity 1 13 -25 2095 129 3 3 chr17 67903790 67904085 -21600468 - AluSx SINE Alu -17 295 1 28 0 0 26 chr17 67904085 67904110 -21600443 + AT_rich Low_complexity Low_complexity 13 38 0 4281 153 78 55 chr17 67904169 67904218 -21600335 - L1MB3 LINE L1 -2 6181 6135 2327 96 0 0 chr17 67904218 67904520 -21600033 - AluSq SINE Alu -11 302 1 4281 153 78 55 chr17 67904520 67905569 -21598984 - L1MB3 LINE L1 -48 6135 5056 2347 84 14 0 chr17 67905569 67905866 -21598687 - AluSx SINE Alu -11 301 1 4281 153 78 55 chr17 67905866 67905908 -21598645 - L1MB3 LINE L1 -1127 5056 5016 1217 139 43 149 chr17 67906447 67906560 -21597993 - L1MB3 LINE L1 -1117 5029 4906 1982 117 11 4 chr17 67906560 67906841 -21597712 - AluSx SINE Alu -24 288 6 1217 139 43 149 chr17 67906841 67907023 -21597530 - L1MB3 LINE L1 -1240 4906 4706 2226 45 48 0 chr17 67907023 67907322 -21597231 - AluYa5 SINE Alu 0 312 1 1217 139 43 149 chr17 67907322 67907351 -21597202 - L1MB3 LINE L1 -1440 4706 4752 1997 146 0 0 chr17 67907351 67907638 -21596915 - AluSx SINE Alu -24 288 2 1217 139 43 149 chr17 67907638 67907719 -21596834 - L1MB3 LINE L1 -1393 4753 4665 874 102 86 0 chr17 67907722 67907850 -21596703 - MER85 DNA T2_type 0 139 1 402 268 87 56 chr17 67907936 67908063 -21596490 + L1M4 LINE L1 4129 4268 -1878 2091 139 0 7 chr17 67908063 67908372 -21596181 + AluSx SINE Alu 1 307 -5 402 268 87 56 chr17 67908372 67908475 -21596078 + L1M4 LINE L1 4268 4366 -1780 1857 130 3 30 chr17 67908527 67908826 -21595727 - AluJb SINE Alu -21 291 1 1327 199 137 3 chr17 67908828 67909164 -21595389 - L1M4 LINE L1 -1151 5806 5426 852 74 0 0 chr17 67909173 67909281 -21595272 + AluSq/x SINE Alu 1 108 -205 28 29 0 0 chr17 67909281 67909316 -21595237 + AT_rich Low_complexity Low_complexity 1 35 0 495 222 82 7 chr17 67909316 67909451 -21595102 - L1M4 LINE L1 -1737 5220 5076 1527 310 60 11 chr17 67909455 67910020 -21594533 - L1M4 LINE L1 -5932 927 335 2310 104 0 0 chr17 67910040 67910338 -21594215 + AluSq SINE Alu 5 302 -11 24 32 0 0 chr17 67910376 67910407 -21594146 + AT_rich Low_complexity Low_complexity 1 31 0 1547 166 47 4 chr17 67910532 67910810 -21593743 + AluJo SINE Alu 1 290 -22 1491 152 85 32 chr17 67911042 67911325 -21593228 - AluJo SINE Alu -13 299 2 1894 134 22 4 chr17 67912938 67913241 -21591312 + AluJb SINE Alu 1 308 0 21 0 0 0 chr17 67914289 67914310 -21590243 + AT_rich Low_complexity Low_complexity 1 21 0 1091 203 9 27 chr17 67914452 67914674 -21589879 + MER20 DNA MER1_type 2 219 0 1728 188 7 3 chr17 67915093 67915391 -21589162 - AluJb SINE Alu -13 299 1 957 240 110 33 chr17 67915815 67916152 -21588401 + L2 LINE L2 1133 1495 -1819 1145 264 206 35 chr17 67916204 67916945 -21587608 + L2 LINE L2 2279 3151 -162 1025 214 119 36 chr17 67916970 67917307 -21587246 - L1ME3A LINE L1 -2 6168 5804 204 232 0 136 chr17 67917322 67917389 -21587164 + L2 LINE L2 3140 3184 -129 2425 65 0 7 chr17 67917389 67917682 -21586871 - AluSc SINE Alu -18 291 1 204 232 0 136 chr17 67917682 67917739 -21586814 + L2 LINE L2 3184 3247 -66 244 253 209 22 chr17 67917770 67917861 -21586692 + L2 LINE L2 3182 3289 -24 2169 108 0 0 chr17 67918031 67918357 -21586196 - AluSx SINE Alu 0 327 2 383 213 53 0 chr17 67918393 67918468 -21586085 + MER58C DNA MER1_type 121 199 -16 298 245 68 41 chr17 67918699 67918846 -21585707 - L1MEc LINE L1 -3529 2600 2450 1806 143 19 19 chr17 67918868 67919175 -21585378 - AluSx SINE Alu -5 307 1 237 270 61 51 chr17 67919344 67919540 -21585013 - L1MEc LINE L1 -4128 2182 1985 1597 153 19 59 chr17 67919555 67919681 -21584872 + AluJb SINE Alu 2 132 -180 1730 103 9 4 chr17 67919681 67919948 -21584605 + AluSg SINE Alu 48 315 0 1597 153 19 59 chr17 67919948 67920140 -21584413 + AluJb SINE Alu 132 309 -3 954 288 82 24 chr17 67920307 67921006 -21583547 - L1MEc LINE L1 -4576 1734 996 261 321 52 39 chr17 67921077 67921385 -21583168 - L1MEc LINE L1 -5264 855 544 331 320 87 70 chr17 67921489 67921816 -21582737 - L1MEc LINE L1 -5694 425 90 207 0 0 0 chr17 67921816 67921839 -21582714 + (TTG)n Simple_repeat Simple_repeat 2 24 0 331 320 87 70 chr17 67921839 67921855 -21582698 - L1MEc LINE L1 -6029 90 76 341 236 212 46 chr17 67922363 67922784 -21581769 - L1ME3A LINE L1 -322 5799 5287 41 48 0 0 chr17 67922793 67922855 -21581698 + AT_rich Low_complexity Low_complexity 1 62 0 327 25 0 0 chr17 67923009 67923049 -21581504 + (TG)n Simple_repeat Simple_repeat 2 41 0 272 75 0 0 chr17 67923051 67923091 -21581462 - Alu SINE Alu -6 296 257 219 36 0 0 chr17 67923091 67923119 -21581434 + (TG)n Simple_repeat Simple_repeat 2 29 0 2175 125 0 0 chr17 67923121 67923418 -21581135 - AluSx SINE Alu -15 297 1 509 280 96 87 chr17 67923506 67924523 -21580030 - L1ME3A LINE L1 -1162 4984 3952 2208 111 10 3 chr17 67924523 67924829 -21579724 - AluSq SINE Alu -5 308 1 509 280 96 87 chr17 67924829 67925063 -21579490 - L1ME3A LINE L1 -2194 3952 3722 2411 72 3 25 chr17 67925126 67925446 -21579107 + AluSq SINE Alu 1 313 0 2334 177 51 2 chr17 67926984 67927423 -21577130 + MER6A DNA MER2_type -19 443 -162 2572 59 0 0 chr17 67927671 67927976 -21576577 - AluY SINE Alu -6 305 1 185 346 0 0 chr17 67928101 67928153 -21576400 - L2 LINE L2 -1 3312 3261 445 272 163 6 chr17 67928521 67928889 -21575664 + L1MC4a LINE L1 5285 5738 -383 1486 251 88 109 chr17 67928927 67929115 -21575438 + L2 LINE L2 1935 2126 -1187 1887 116 6 85 chr17 67929115 67929444 -21575109 - AluSx SINE Alu -9 303 1 1486 251 88 109 chr17 67929444 67929744 -21574809 + L2 LINE L2 2126 2431 -882 778 201 0 15 chr17 67929744 67929878 -21574675 - FLAM_C SINE Alu 0 133 2 1486 251 88 109 chr17 67929878 67930042 -21574511 + L2 LINE L2 2431 2597 -716 2268 101 27 3 chr17 67930042 67930340 -21574213 - AluSx SINE Alu -7 305 1 1486 251 88 109 chr17 67930340 67931027 -21573526 + L2 LINE L2 2597 3309 -4 372 293 43 7 chr17 67931044 67931184 -21573369 + L1MC4a LINE L1 5753 5897 -1911 838 152 24 55 chr17 67931254 67931418 -21573135 - FAM SINE Alu -16 169 11 503 106 0 0 chr17 67931432 67931498 -21573055 + Alu SINE Alu 231 296 -15 605 187 114 16 chr17 67931924 67932047 -21572506 - AluJo SINE Alu -176 136 2 268 200 57 67 chr17 67932622 67932727 -21571826 - L1MC5 LINE L1 -838 7123 7020 4660 184 38 5 chr17 67932880 67933831 -21570722 - L1M4 LINE L1 -407 5771 4759 2076 163 129 3 chr17 67933831 67934211 -21570342 - MSTA LTR MaLR 0 428 1 4660 184 38 5 chr17 67934211 67934683 -21569870 - L1M4 LINE L1 -1419 4759 4304 1880 107 8 8 chr17 67934688 67934940 -21569613 - AluSg SINE Alu -32 278 27 836 39 0 0 chr17 67934940 67935043 -21569510 + Harlequin LTR ERV1 2172 2274 -4622 1155 151 0 0 chr17 67935108 67935274 -21569279 + AluSg/x SINE Alu 131 296 -14 207 0 0 0 chr17 67935334 67935357 -21569196 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1604 137 3 63 chr17 67935360 67935515 -21569038 - AluJo SINE Alu -31 281 118 234 0 0 0 chr17 67935515 67935541 -21569012 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1858 151 0 4 chr17 67935547 67935818 -21568735 - AluSx SINE Alu -37 275 6 1604 137 3 63 chr17 67935818 67935954 -21568599 - AluJo SINE Alu -199 113 1 436 307 53 53 chr17 67936025 67936185 -21568368 - L1MEd LINE L1 -4918 1201 1039 2385 101 0 13 chr17 67936185 67936501 -21568052 - AluSx SINE Alu 0 312 1 436 307 53 53 chr17 67936501 67936623 -21567930 - L1MEd LINE L1 -5079 1040 919 315 0 0 0 chr17 67937882 67937917 -21566636 + (TG)n Simple_repeat Simple_repeat 2 36 0 2310 109 0 3 chr17 67937918 67938222 -21566331 - AluSg SINE Alu -7 303 1 2212 113 0 13 chr17 67938371 67938680 -21565873 - AluSg SINE Alu -5 305 1 2430 73 0 19 chr17 67938753 67939070 -21565483 + AluY SINE Alu 1 311 0 1911 113 0 70 chr17 67939309 67939611 -21564942 - AluSx SINE Alu -31 281 1 2280 104 0 3 chr17 67939624 67939922 -21564631 - AluSx SINE Alu -15 297 1 455 242 16 62 chr17 67940094 67940222 -21564331 + L2 LINE L2 3151 3272 0 240 316 0 0 chr17 67940222 67940298 -21564255 + MIR SINE MIR 136 211 -51 338 309 8 48 chr17 67940354 67940480 -21564073 + MIR SINE MIR 49 169 -93 1944 124 11 0 chr17 67940480 67940747 -21563806 - AluSx SINE Alu -32 280 11 2453 83 0 0 chr17 67941065 67941365 -21563188 + AluY SINE Alu 1 300 -11 1985 134 3 26 chr17 67943934 67944247 -21560306 + AluSx SINE Alu 1 306 -6 1450 189 46 3 chr17 67944248 67944533 -21560020 + AluJo SINE Alu 1 297 -15 207 305 0 0 chr17 67944643 67944702 -21559851 + (TA)n Simple_repeat Simple_repeat 1 59 0 41 14 0 29 chr17 67945110 67945126 -21559427 + AT_rich Low_complexity Low_complexity 1 16 -52 2431 65 14 0 chr17 67945126 67945419 -21559134 - AluSg SINE Alu -13 297 1 41 14 0 29 chr17 67945419 67945439 -21559114 + AT_rich Low_complexity Low_complexity 16 35 -33 710 227 19 19 chr17 67945439 67945593 -21558960 - FRAM SINE Alu -12 154 1 41 14 0 29 chr17 67945593 67945625 -21558928 + AT_rich Low_complexity Low_complexity 35 68 0 1448 143 0 0 chr17 67945647 67945857 -21558696 - AluSx SINE Alu -102 210 1 1852 161 10 0 chr17 67946576 67946867 -21557686 - AluJo SINE Alu -18 294 1 200 119 0 24 chr17 67947086 67947128 -21557425 + (TTTTTA)n Simple_repeat Simple_repeat 4 44 0 1695 134 27 44 chr17 67947796 67948094 -21556459 - AluJb SINE Alu -8 304 12 21 0 0 0 chr17 67948169 67948190 -21556363 + AT_rich Low_complexity Low_complexity 1 21 0 2029 148 3 0 chr17 67949010 67949320 -21555233 - AluSx SINE Alu -1 311 1 1839 125 75 0 chr17 67950305 67950472 -21554081 - AluSx SINE Alu -12 300 102 5038 40 3 2 chr17 67950472 67951044 -21553509 - L1PA4 LINE L1 0 6155 5583 1839 125 75 0 chr17 67951044 67951155 -21553398 - AluSx SINE Alu -210 102 1 2075 130 7 3 chr17 67951721 67952013 -21552540 + AluSx SINE Alu 1 293 -19 1995 236 28 37 chr17 67952083 67952481 -21552072 + L1ME2 LINE L1 5274 5667 -497 830 178 0 30 chr17 67952481 67952616 -21551937 + FLAM_C SINE Alu 1 131 -2 1995 236 28 37 chr17 67952616 67952815 -21551738 + L1ME2 LINE L1 5667 5866 -298 199 250 0 23 chr17 67952817 67952861 -21551692 - L2 LINE L2 -86 3186 3144 933 94 71 0 chr17 67953452 67953579 -21550974 + AluJb SINE Alu 1 136 -176 2238 114 0 3 chr17 67953579 67953878 -21550675 + AluSp SINE Alu 6 303 -10 462 159 261 0 chr17 67953880 67953968 -21550585 - AluJo/FLAM SINE Alu -200 112 2 2010 118 14 3 chr17 67954190 67954479 -21550074 - AluSq SINE Alu -21 292 1 1071 153 6 22 chr17 67954591 67954774 -21549779 + FRAM SINE Alu 1 175 -1 2207 93 0 45 chr17 67954908 67955221 -21549332 - AluSc SINE Alu -10 299 1 2335 92 7 0 chr17 67955288 67955592 -21548961 - AluSq SINE Alu -6 307 2 643 159 71 24 chr17 67956096 67956222 -21548331 - FLAM_A SINE Alu 0 133 2 2278 98 3 3 chr17 67957580 67957885 -21546668 - AluSq SINE Alu -8 305 1 22 0 0 0 chr17 67957885 67957907 -21546646 + AT_rich Low_complexity Low_complexity 1 22 0 2349 88 0 7 chr17 67958409 67958704 -21545849 + AluSx SINE Alu 1 293 -19 865 164 62 0 chr17 67958714 67958860 -21545693 + AluSp SINE Alu 138 292 -21 393 291 39 29 chr17 67958967 67959173 -21545380 - L1M4 LINE L1 -765 5381 5174 2314 82 20 0 chr17 67959212 67959505 -21545048 - AluSp SINE Alu -14 299 1 2714 64 6 3 chr17 67959717 67960047 -21544506 - L1PA7 LINE L1 0 6154 5824 2086 129 0 13 chr17 67960442 67960752 -21543801 + AluSx SINE Alu 1 306 -6 1985 98 0 8 chr17 67961174 67961440 -21543113 + AluSq SINE Alu 45 308 -5 549 179 74 0 chr17 67961458 67961553 -21543000 - FLAM_A SINE Alu -40 102 1 21 0 0 0 chr17 67961556 67961577 -21542976 + AT_rich Low_complexity Low_complexity 1 21 0 1714 139 27 44 chr17 67961636 67961931 -21542622 - AluJo SINE Alu -22 290 1 2189 109 0 10 chr17 67962451 67962745 -21541808 + AluSx SINE Alu 9 299 -13 2197 84 0 45 chr17 67962968 67963278 -21541275 + AluSx SINE Alu 1 296 -16 1976 145 3 0 chr17 67963278 67963584 -21540969 + AluSg SINE Alu 1 307 0 1997 147 0 3 chr17 67963916 67964208 -21540345 + AluJb SINE Alu 1 291 -21 528 196 18 36 chr17 67964520 67964632 -21539921 - FLAM_A SINE Alu -5 137 28 515 89 0 122 chr17 67964651 67964701 -21539852 - MADE1 DNA Mariner -1 79 43 2371 93 3 0 chr17 67964701 67965002 -21539551 + AluSp SINE Alu 5 306 -7 515 89 0 122 chr17 67965002 67965041 -21539512 - MADE1 DNA Mariner -37 43 1 2484 63 0 0 chr17 67965297 67965600 -21538953 + AluY SINE Alu 8 310 -1 1672 157 42 7 chr17 67965619 67965751 -21538802 + AluJo SINE Alu 2 128 -184 2313 77 27 7 chr17 67965751 67966049 -21538504 + AluSx SINE Alu 2 305 -7 1672 157 42 7 chr17 67966049 67966202 -21538351 + AluJo SINE Alu 128 297 -15 2008 91 70 24 chr17 67966428 67966590 -21537963 - AluSx SINE Alu -12 300 118 2415 110 0 0 chr17 67966590 67966898 -21537655 - AluSq SINE Alu -5 308 1 2008 91 70 24 chr17 67966898 67967022 -21537531 - AluSx SINE Alu -194 118 1 2240 109 0 0 chr17 67967038 67967331 -21537222 - AluSg SINE Alu -17 293 1 721 144 9 0 chr17 67967778 67967889 -21536664 + FRAM SINE Alu 56 167 -9 2723 105 21 108 chr17 67967889 67967950 -21536603 + Tigger1 DNA MER2_type 1739 1804 -614 198 0 0 0 chr17 67967950 67967972 -21536581 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2723 105 21 108 chr17 67967972 67968445 -21536108 + Tigger1 DNA MER2_type 1804 2226 -192 1942 153 6 19 chr17 67968445 67968759 -21535794 - AluSx SINE Alu -2 310 1 2041 98 17 44 chr17 67968768 67969064 -21535489 - AluSg SINE Alu -17 293 6 273 61 0 0 chr17 67969140 67969173 -21535380 + AluJb SINE Alu 78 110 -192 * 2046 199 80 2 chr17 67969164 67969590 -21534963 - Tigger1 DNA MER2_type -1956 462 4 310 320 52 0 chr17 67970228 67970325 -21534228 - L2 LINE L2 -2 3270 3169 601 213 264 0 chr17 67970739 67970894 -21533659 - MER3 DNA MER1_type -13 196 1 1710 126 0 0 chr17 67971012 67971242 -21533311 - AluSx SINE Alu -81 231 2 2091 146 0 9 chr17 67971250 67971565 -21532988 - AluSx SINE Alu 0 312 1 2169 131 3 0 chr17 67971574 67971871 -21532682 - AluSq SINE Alu -15 298 1 533 145 137 43 chr17 67971923 67972040 -21532513 + MER2 DNA MER2_type 68 195 -150 1502 144 96 37 chr17 67972070 67972208 -21532345 - AluJb SINE Alu -25 287 159 2391 74 0 10 chr17 67972208 67972504 -21532049 - AluY SINE Alu -17 294 2 1502 144 96 37 chr17 67972504 67972636 -21531917 - AluJb SINE Alu -153 159 1 280 279 0 0 chr17 67972645 67972706 -21531847 + MER2 DNA MER2_type 282 342 -3 914 170 30 70 chr17 67972841 67973004 -21531549 + L1MB7 LINE L1 5964 6117 -67 2264 114 0 0 chr17 67973004 67973310 -21531243 + AluSg SINE Alu 1 306 -4 914 170 30 70 chr17 67973310 67973376 -21531177 + L1MB7 LINE L1 6117 6184 0 1365 135 24 5 chr17 67973457 67973664 -21530889 + AluJb SINE Alu 88 298 -14 2088 93 7 50 chr17 67973722 67973858 -21530695 + AluSx SINE Alu 1 141 -171 2319 82 4 0 chr17 67973858 67974138 -21530415 + AluSp SINE Alu 1 281 -32 240 35 0 0 chr17 67974138 67974167 -21530386 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2088 93 7 50 chr17 67974167 67974330 -21530223 + AluSx SINE Alu 139 288 -24 2346 98 0 0 chr17 67975052 67975347 -21529206 + AluSx SINE Alu 1 295 -17 284 247 0 49 chr17 67975349 67975430 -21529123 + MER21B LTR ERV1 4 80 -783 2095 131 0 0 chr17 67975432 67975714 -21528839 + AluSx SINE Alu 1 282 -30 1917 164 0 7 chr17 67975937 67976235 -21528318 + AluJo SINE Alu 1 296 -16 1590 204 124 13 chr17 67976244 67976684 -21527869 + MER21B LTR ERV1 415 810 -53 577 165 29 0 chr17 67977030 67977133 -21527420 - FLAM_C SINE Alu -36 107 2 332 175 245 49 chr17 67977649 67977792 -21526761 - MIR SINE MIR -9 253 83 199 293 120 48 chr17 67978836 67979003 -21525550 - L3 LINE CR1 0 1577 1399 2523 57 0 3 chr17 67979007 67979304 -21525249 - AluY SINE Alu -15 296 1 1803 93 4 8 chr17 67979338 67979584 -21524969 + AluSc SINE Alu 1 245 -64 1472 81 10 5 chr17 67979684 67979881 -21524672 + AluSc SINE Alu 98 295 -14 367 331 14 14 chr17 67980103 67980251 -21524302 + MIR3 SINE MIR 51 198 -10 2147 135 0 0 chr17 67982378 67982674 -21521879 - AluSx SINE Alu -16 296 1 2481 73 0 6 chr17 67983198 67983511 -21521042 - AluY SINE Alu 0 311 1 2132 104 27 0 chr17 67983808 67984107 -21520446 - AluSx SINE Alu -5 307 1 1715 194 0 3 chr17 67984107 67984411 -21520142 - AluJb SINE Alu -9 303 1 2047 92 3 44 chr17 67984635 67984770 -21519783 + AluSg SINE Alu 1 140 -164 2164 92 4 7 chr17 67984770 67985051 -21519502 + AluSc SINE Alu 1 280 -29 256 24 49 0 chr17 67985057 67985098 -21519455 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2047 92 3 44 chr17 67985098 67985271 -21519282 + AluSg SINE Alu 145 304 0 466 260 81 47 chr17 67985278 67985570 -21518983 - L1ME1 LINE L1 -28 6138 5717 2366 105 0 0 chr17 67985570 67985875 -21518678 + AluSg SINE Alu 1 305 -5 466 260 81 47 chr17 67985875 67985988 -21518565 - L1ME1 LINE L1 -449 5717 5609 374 267 9 17 chr17 67986001 67986117 -21518436 + L2 LINE L2 3199 3313 0 1972 140 0 3 chr17 67986594 67986879 -21517674 + AluSx SINE Alu 1 284 -28 225 128 26 0 chr17 67987110 67987149 -21517404 - MER117 DNA MER1_type -154 43 4 1858 180 0 0 chr17 67987269 67987554 -21516999 + AluJo SINE Alu 1 288 -24 264 30 0 0 chr17 67987554 67987587 -21516966 + (CA)n Simple_repeat Simple_repeat 2 34 0 1858 180 0 0 chr17 67987587 67987612 -21516941 + AluJo SINE Alu 287 311 -1 358 131 0 0 chr17 67987630 67987691 -21516862 + L1MB4 LINE L1 6120 6180 0 342 99 19 17 chr17 67987701 67987772 -21516781 - Charlie4 DNA MER1_type -161 1800 1725 2117 118 0 53 chr17 67987792 67988113 -21516440 - AluSx SINE Alu -8 304 1 2278 97 0 7 chr17 67988470 67988768 -21515785 + AluSc SINE Alu 1 296 -13 328 284 56 37 chr17 67989566 67989728 -21514825 - L2 LINE L2 -198 3074 2910 237 287 30 143 chr17 67990079 67990135 -21514418 - L2 LINE L2 -731 2583 2522 2320 119 0 0 chr17 67990135 67990447 -21514106 - AluSx SINE Alu 0 312 1 237 287 30 143 chr17 67990447 67990584 -21513969 - L2 LINE L2 -792 2522 2371 430 113 0 0 chr17 67990584 67990646 -21513907 + L1PA16 LINE L1 6094 6155 -11 261 0 0 0 chr17 67990656 67990685 -21513868 + (CA)n Simple_repeat Simple_repeat 2 30 0 237 287 30 143 chr17 67990685 67990942 -21513611 - L2 LINE L2 -953 2361 2173 697 237 208 23 chr17 67991709 67992055 -21512498 - L1MC/D LINE L1 -2127 5681 5272 324 306 148 19 chr17 67992285 67992494 -21512059 - L1MC/D LINE L1 -1164 4982 4747 1483 139 23 0 chr17 67992520 67992736 -21511817 + AluJb SINE Alu 12 232 -80 2251 113 0 0 chr17 68044695 68045004 -21459549 + AluSg SINE Alu 1 309 -1 229 283 0 0 chr17 68045561 68045614 -21458939 + (TATG)n Simple_repeat Simple_repeat 2 54 0 277 288 56 32 chr17 68046458 68046583 -21457970 - L2 LINE L2 -1 3271 3144 185 317 150 0 chr17 68046768 68046828 -21457725 + MIR SINE MIR 2 70 -192 627 194 58 19 chr17 68047154 68047309 -21457244 + MER5A DNA MER1_type 29 189 0 2665 20 3 0 chr17 68047532 68047836 -21456717 - AluY SINE Alu -6 305 1 774 191 0 7 chr17 68048699 68048840 -21455713 - FLAM_C SINE Alu -3 140 1 215 146 49 0 chr17 68048840 68048881 -21455672 - MIR SINE MIR -58 150 108 292 253 95 0 chr17 68049690 68049785 -21454768 + MIR SINE MIR 37 140 -68 228 239 164 0 chr17 68050458 68050525 -21454028 + MER112 DNA MER1_type 126 203 -57 1136 270 131 74 chr17 68051050 68051196 -21453357 - LTR39 LTR ERV1 0 783 647 2262 116 0 0 chr17 68051196 68051506 -21453047 + AluSx SINE Alu 1 310 -2 1136 270 131 74 chr17 68051506 68052100 -21452453 - LTR39 LTR ERV1 -136 647 1 2216 95 0 3 chr17 68052578 68052872 -21451681 - AluSq SINE Alu -20 293 1 2419 88 0 0 chr17 68053477 68053783 -21450770 - AluSg SINE Alu -4 306 1 331 321 46 61 chr17 68053934 68054130 -21450423 - MIR3 SINE MIR 0 208 16 204 170 38 38 chr17 68054335 68054388 -21450165 + (TAGGG)n Simple_repeat Simple_repeat 3 55 0 431 254 104 52 chr17 68054476 68054669 -21449884 - MIR SINE MIR -54 208 6 1488 189 7 28 chr17 68054689 68054975 -21449578 - AluJo SINE Alu -31 281 2 2854 92 35 33 chr17 68055029 68055072 -21449481 - MSTA LTR MaLR -3 425 384 2151 105 41 0 chr17 68055072 68055366 -21449187 + AluSx SINE Alu 1 306 -6 2854 92 35 33 chr17 68055366 68055746 -21448807 - MSTA LTR MaLR -44 384 1 243 292 15 0 chr17 68055866 68055931 -21448622 + L2 LINE L2 3198 3263 -9 247 250 98 22 chr17 68056414 68056506 -21448047 + L2 LINE L2 3134 3232 -40 30 0 0 0 chr17 68057297 68057327 -21447226 + AT_rich Low_complexity Low_complexity 1 30 0 648 96 115 0 chr17 68057333 68057437 -21447116 - FLAM_C SINE Alu -17 116 1 289 272 19 19 chr17 68057530 68057633 -21446920 - MIR SINE MIR -89 119 17 260 310 12 35 chr17 68058330 68058501 -21446052 + C-rich Low_complexity Low_complexity 1 167 0 28 0 0 0 chr17 68058643 68058671 -21445882 + GC_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr17 68058788 68058824 -21445729 + GC_rich Low_complexity Low_complexity 1 36 0 383 351 29 0 chr17 68061213 68061384 -21443169 - MIR SINE MIR -48 214 39 220 315 27 72 chr17 68062333 68062444 -21442109 - MIR SINE MIR -148 114 9 183 42 0 0 chr17 68062802 68062826 -21441727 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 286 283 118 75 chr17 68063973 68064160 -21440393 + MIR SINE MIR 68 262 0 2297 86 0 3 chr17 68064186 68064489 -21440064 + AluY SINE Alu 5 306 -5 1577 151 102 7 chr17 68064546 68064830 -21439723 + AluJb SINE Alu 2 312 0 3696 148 23 31 chr17 68064846 68065257 -21439296 - MER41B LTR ERV1 0 635 229 2172 123 0 0 chr17 68065257 68065549 -21439004 - AluSg SINE Alu -18 292 1 3696 148 23 31 chr17 68065549 68065777 -21438776 - MER41B LTR ERV1 -406 229 1 2213 120 0 0 chr17 68065781 68066081 -21438472 - AluSx SINE Alu -12 300 1 210 71 0 0 chr17 68066134 68066162 -21438391 + (T)n Simple_repeat Simple_repeat 1 28 0 1675 166 10 26 chr17 68066616 68066738 -21437815 + AluJo SINE Alu 1 123 -189 2482 54 0 0 chr17 68066738 68067036 -21437517 - AluY SINE Alu -13 298 1 1675 166 10 26 chr17 68067036 68067220 -21437333 + AluJo SINE Alu 123 302 -10 2395 62 3 13 chr17 68067410 68067718 -21436835 - AluY SINE Alu -6 305 1 813 178 0 8 chr17 68067723 68067852 -21436701 - FLAM_C SINE Alu -3 130 3 963 77 31 8 chr17 68068029 68068159 -21436394 + AluSq/x SINE Alu 2 134 -178 250 75 0 0 chr17 68068160 68068200 -21436353 + AluSc SINE Alu 93 132 -167 2185 131 0 0 chr17 68068201 68068513 -21436040 + AluSx SINE Alu 1 312 0 1470 139 57 18 chr17 68068819 68069100 -21435453 - AluJo SINE Alu -9 303 12 2208 123 0 0 chr17 68069406 68069716 -21434837 + AluSg SINE Alu 1 310 0 1032 114 34 40 chr17 68069716 68069891 -21434662 + AluSg/x SINE Alu 134 307 -5 2110 100 0 29 chr17 68070000 68070310 -21434243 + AluSx SINE Alu 1 301 -11 430 315 103 47 chr17 68070344 68070576 -21433977 + L1ME3A LINE L1 5448 5692 -429 923 151 0 0 chr17 68070579 68070725 -21433828 - FRAM SINE Alu -23 153 8 2076 82 0 63 chr17 68070802 68071117 -21433436 - AluSp SINE Alu -18 295 1 269 406 0 0 chr17 68071289 68071385 -21433168 - L2 LINE L2 -20 3252 3157 1333 171 43 43 chr17 68071465 68071632 -21432921 - AluJo SINE Alu 0 301 132 2286 47 0 75 chr17 68071632 68071954 -21432599 - AluY SINE Alu -13 298 1 1333 171 43 43 chr17 68071954 68072087 -21432466 - AluJo SINE Alu -168 133 1 883 180 64 0 chr17 68072117 68072289 -21432264 + AluSg/x SINE Alu 129 311 -1 309 289 101 18 chr17 68072538 68072766 -21431787 + L1ME3A LINE L1 5706 5952 -218 * 1966 253 104 5 chr17 68072734 68072842 -21431711 - L1MC4 LINE L1 -17 8025 7929 252 0 0 0 chr17 68072842 68072870 -21431683 + (TG)n Simple_repeat Simple_repeat 1 28 0 1966 253 104 5 chr17 68072870 68073403 -21431150 - L1MC4 LINE L1 -113 7929 7313 1908 153 7 0 chr17 68073403 68073697 -21430856 - AluSx SINE Alu -16 296 1 1966 253 104 5 chr17 68073697 68073719 -21430834 - L1MC4 LINE L1 -729 7313 7295 841 205 78 132 chr17 68073713 68073996 -21430557 + L1ME3A LINE L1 5639 5912 -252 * 2245 108 0 3 chr17 68073996 68074310 -21430243 + AluSq SINE Alu 1 313 0 841 205 78 132 chr17 68074310 68074393 -21430160 + L1ME3A LINE L1 5912 5998 -166 232 250 53 0 chr17 68074558 68074634 -21429919 + L1ME4a LINE L1 5325 5404 -762 271 263 96 19 chr17 68074667 68074876 -21429677 + L1ME4a LINE L1 5677 5901 -220 199 158 18 35 chr17 68074886 68074943 -21429610 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 1983 145 3 0 chr17 68075088 68075384 -21429169 + AluSq SINE Alu 1 297 -16 604 154 205 0 chr17 68075395 68075512 -21429041 + FLAM_C SINE Alu 2 142 -1 202 241 138 0 chr17 68076229 68076287 -21428266 - MIR SINE MIR -58 150 85 263 200 33 11 chr17 68076361 68076451 -21428102 + (TA)n Simple_repeat Simple_repeat 2 93 0 256 259 178 24 chr17 68076451 68076477 -21428076 - L1ME4a LINE L1 -161 5960 5939 1875 156 0 19 chr17 68076477 68076785 -21427768 - AluJo SINE Alu -10 302 1 256 259 178 24 chr17 68076785 68076955 -21427598 - L1ME4a LINE L1 -182 5939 5731 2521 59 0 0 chr17 68076962 68077269 -21427284 - AluY SINE Alu -4 307 1 801 153 15 8 chr17 68077272 68077403 -21427150 - AluJo/FLAM SINE Alu -169 133 2 275 256 23 0 chr17 68077792 68077878 -21426675 - L1ME4a LINE L1 -50 6071 5984 352 319 66 24 chr17 68077879 68078045 -21426508 - MER5A DNA MER1_type 0 189 6 644 302 89 27 chr17 68078090 68078119 -21426434 - L1ME4a LINE L1 -194 5927 5901 2268 103 0 3 chr17 68078119 68078431 -21426122 - AluSx SINE Alu -1 311 1 644 302 89 27 chr17 68078431 68078772 -21425781 - L1ME4a LINE L1 -220 5901 5534 212 346 48 10 chr17 68078923 68079027 -21425526 - MIR SINE MIR -62 146 39 1734 84 4 0 chr17 68079068 68079295 -21425258 + AluSx SINE Alu 1 228 -84 2019 123 0 0 chr17 68080259 68080544 -21424009 + AluSx SINE Alu 5 289 -23 2045 102 19 22 chr17 68080827 68081141 -21423412 - AluSq SINE Alu 0 313 1 305 194 284 15 chr17 68081267 68081401 -21423152 - Charlie8 DNA MER1_type -2146 271 102 515 259 100 45 chr17 68081473 68081693 -21422860 + MIR SINE MIR 31 262 0 453 240 99 0 chr17 68081714 68081835 -21422718 - MER94 DNA DNA -1 133 1 295 230 100 0 chr17 68081922 68082022 -21422531 + MIR3 SINE MIR 90 199 -9 2356 74 0 0 chr17 68082031 68082328 -21422225 - AluSc SINE Alu -12 297 1 1771 154 13 0 chr17 68082520 68082818 -21421735 - AluSx SINE Alu -10 302 1 195 42 0 0 chr17 68084307 68084331 -21420222 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 281 231 0 0 chr17 68085367 68085419 -21419134 - L2 LINE L2 -6 3307 3256 1708 145 0 72 chr17 68085809 68085950 -21418603 + AluJo SINE Alu 6 156 -156 2163 76 3 3 chr17 68085950 68086240 -21418313 + AluY SINE Alu 1 290 -21 2044 56 0 4 chr17 68086240 68086511 -21418042 + AluY SINE Alu 33 304 0 1708 145 0 72 chr17 68086511 68086698 -21417855 + AluJo SINE Alu 154 312 0 1536 150 0 55 chr17 68086875 68087002 -21417551 - AluJo SINE Alu -52 260 154 2194 97 3 0 chr17 68087002 68087290 -21417263 - AluSg SINE Alu -21 289 1 1536 150 0 55 chr17 68087290 68087436 -21417117 - AluJo SINE Alu -158 154 2 435 281 238 13 chr17 68087815 68088046 -21416507 - MLT1K LTR MaLR -162 426 144 253 310 46 0 chr17 68088203 68088290 -21416263 + L2 LINE L2 3169 3259 -13 219 69 0 0 chr17 68088290 68088319 -21416234 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 200 358 37 28 chr17 68088371 68088480 -21416073 - L2 LINE L2 -1 3271 3162 251 277 34 88 chr17 68089148 68089296 -21415257 + L2 LINE L2 3101 3240 -32 198 230 176 0 chr17 68089324 68089398 -21415155 - MIR3 SINE MIR -14 194 108 230 162 44 88 chr17 68089405 68089473 -21415080 + MIR3 SINE MIR 92 156 -52 1789 190 21 43 chr17 68089879 68090203 -21414350 - MLT1A1 LTR MaLR 0 365 49 2070 102 0 20 chr17 68090203 68090506 -21414047 + AluSx SINE Alu 1 297 -15 1789 190 21 43 chr17 68090506 68090554 -21413999 - MLT1A1 LTR MaLR -316 49 1 183 171 43 86 chr17 68090716 68090786 -21413767 - L2 LINE L2 -568 2746 2680 290 202 83 36 chr17 68090861 68090945 -21413608 - L2 LINE L2 -1 3271 3184 351 366 11 51 chr17 68090965 68091140 -21413413 + L1ME LINE L1 3 170 -5900 488 259 64 86 chr17 68091234 68091454 -21413099 + L1ME LINE L1 316 530 -5540 277 230 20 184 chr17 68091570 68091874 -21412679 + L1ME LINE L1 521 634 -5436 440 290 98 0 chr17 68092013 68092248 -21412305 - L2 LINE L2 -311 2961 2709 243 280 53 8 chr17 68092249 68092381 -21412172 - L1MC/D LINE L1 -2375 5433 5296 618 125 42 14 chr17 68092418 68092562 -21411991 + CT-rich Low_complexity Low_complexity 2 149 0 656 126 78 0 chr17 68092564 68092667 -21411886 - HY1 scRNA scRNA -1 111 1 21 0 0 0 chr17 68092851 68092872 -21411681 + AT_rich Low_complexity Low_complexity 1 21 0 2088 117 0 7 chr17 68092907 68093205 -21411348 + AluSx SINE Alu 1 296 -16 234 331 29 36 chr17 68093256 68093395 -21411158 + MIR3 SINE MIR 5 142 -66 437 208 279 0 chr17 68093407 68093561 -21410992 - MIR SINE MIR -13 249 53 2206 103 10 6 chr17 68093570 68093881 -21410672 + AluSp SINE Alu 2 313 0 427 196 15 23 chr17 68094127 68094260 -21410293 + CT-rich Low_complexity Low_complexity 3 134 0 935 185 46 19 chr17 68094263 68094479 -21410074 - L1MB8 LINE L1 -11 6167 5946 2740 7 0 0 chr17 68094895 68095200 -21409353 - AluYa5 SINE Alu -6 305 1 184 267 12 58 chr17 68095327 68095413 -21409140 + MIR SINE MIR 159 240 -22 2099 108 0 34 chr17 68096059 68096382 -21408171 + AluSx SINE Alu 1 312 0 422 304 19 87 chr17 68098711 68098977 -21405576 - L2 LINE L2 -101 3171 2924 1789 143 25 35 chr17 68099015 68099357 -21405196 + AluJo SINE Alu 1 312 0 446 243 191 0 chr17 68099411 68099563 -21404990 + MER5A DNA MER1_type 9 189 0 390 246 61 0 chr17 68099772 68099886 -21404667 + MIR SINE MIR 63 183 -79 369 0 0 0 chr17 68100026 68100067 -21404486 + (CA)n Simple_repeat Simple_repeat 2 42 0 2205 99 0 3 chr17 68100154 68100456 -21404097 - AluSx SINE Alu -11 301 1 1966 82 9 88 chr17 68100458 68100788 -21403765 - AluSx SINE Alu 0 312 9 182 219 0 0 chr17 68101839 68101880 -21402673 + L2 LINE L2 3271 3311 -2 1757 145 7 3 chr17 68102028 68102311 -21402242 - AluJb SINE Alu -28 284 1 242 224 7 57 chr17 68103255 68103391 -21401162 + MIR SINE MIR 41 231 -31 2260 108 0 0 chr17 68103650 68103957 -21400596 + AluSx SINE Alu 1 307 -5 310 180 191 34 chr17 68104089 68104178 -21400375 - L2 LINE L2 -12 3301 3199 2288 98 0 3 chr17 68104444 68104749 -21399804 - AluSx SINE Alu -8 304 1 573 242 129 46 chr17 68107578 68107772 -21396781 + MIR SINE MIR 2 211 -51 294 304 257 0 chr17 68107889 68108037 -21396516 - MIR SINE MIR -21 241 56 220 289 51 58 chr17 68108633 68108709 -21395844 + MER5A DNA MER1_type 1 76 -113 2302 65 3 0 chr17 68108709 68109022 -21395531 + AluY SINE Alu 1 311 0 220 289 51 58 chr17 68109022 68109101 -21395452 + MER5A DNA MER1_type 76 155 -34 301 255 128 10 chr17 68109118 68109220 -21395333 - MIR3 SINE MIR -52 156 43 336 251 246 6 chr17 68110220 68110391 -21394162 - MIR SINE MIR -25 237 26 745 250 71 19 chr17 68112118 68112330 -21392223 + MIR SINE MIR 25 247 -15 180 77 0 0 chr17 68113116 68113142 -21391411 + (CCCTG)n Simple_repeat Simple_repeat 1 26 0 2351 77 3 0 chr17 68113580 68113880 -21390673 - AluSq SINE Alu -12 301 1 2283 103 3 0 chr17 68114126 68114437 -21390116 + AluSp SINE Alu 1 312 -1 198 0 0 0 chr17 68114450 68114472 -21390081 + (T)n Simple_repeat Simple_repeat 1 22 0 1719 181 0 3 chr17 68114521 68114819 -21389734 + AluJb SINE Alu 1 297 -15 676 126 19 0 chr17 68114845 68114948 -21389605 + U6 snRNA snRNA 2 106 -1 631 259 45 21 chr17 68114981 68115267 -21389286 - Charlie7 DNA MER1_type -244 2368 2076 476 157 0 24 chr17 68115271 68115354 -21389199 + FLAM_A SINE Alu 40 120 -22 334 264 201 0 chr17 68115354 68115498 -21389055 - Charlie7 DNA MER1_type -673 1939 1767 776 208 107 9 chr17 68115501 68115717 -21388836 - Charlie7 DNA MER1_type -2041 571 335 2023 110 0 13 chr17 68115798 68116116 -21388437 + AluSx SINE Alu 1 312 0 289 224 168 8 chr17 68116132 68116257 -21388296 - L1ME4a LINE L1 -12 6109 5965 356 318 19 9 chr17 68116261 68116368 -21388185 - L1ME4a LINE L1 -199 5922 5815 1746 158 0 29 chr17 68116469 68116780 -21387773 - AluJb SINE Alu -10 302 1 1832 93 4 43 chr17 68116909 68117110 -21387443 - MER1B DNA MER1_type -2373 339 149 2208 71 7 0 chr17 68117110 68117420 -21387133 + AluSq SINE Alu 1 312 0 1832 93 4 43 chr17 68117420 68117497 -21387056 - MER1B DNA MER1_type -2563 149 71 223 297 66 0 chr17 68117923 68118014 -21386539 - MIR SINE MIR -60 202 106 2409 70 3 0 chr17 68118092 68118392 -21386161 - AluSp SINE Alu -12 301 1 180 0 0 0 chr17 68118497 68118517 -21386036 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1579 66 0 0 chr17 68118631 68118828 -21385725 + AluY SINE Alu 98 294 -17 491 149 240 16 chr17 68122298 68122419 -21382134 + MIR SINE MIR 12 159 -103 2295 107 0 3 chr17 68122427 68122726 -21381827 + AluSx SINE Alu 9 306 -6 356 231 109 90 chr17 68124764 68124920 -21379633 + MIR SINE MIR 66 224 -38 446 293 165 43 chr17 68125300 68125652 -21378901 - L2 LINE L2 -354 2960 2566 336 102 0 0 chr17 68125660 68125709 -21378844 + (TG)n Simple_repeat Simple_repeat 2 50 0 255 250 0 0 chr17 68126295 68126347 -21378206 + LTR30 LTR ERV1 1 52 -670 1212 99 32 86 chr17 68126349 68126570 -21377983 + LTR12 LTR ERV1 59 267 -447 382 204 0 21 chr17 68126599 68126692 -21377861 + LTR30 LTR ERV1 553 643 -79 2548 74 0 0 chr17 68126718 68127014 -21377539 + AluY SINE Alu 1 296 -15 640 117 7 0 chr17 68127014 68127119 -21377434 + LTR12 LTR ERV1 492 714 0 620 172 89 19 chr17 68128652 68128809 -21375744 - MIR SINE MIR -1 261 94 2116 112 30 10 chr17 68129139 68129442 -21375111 - AluSx SINE Alu -3 309 1 2440 97 0 0 chr17 68129631 68129931 -21374622 + AluSc SINE Alu 1 300 -9 2140 113 10 3 chr17 68130322 68130622 -21373931 - AluSp SINE Alu -10 303 2 1049 237 14 62 chr17 68130950 68131224 -21373329 - L1ME1 LINE L1 -60 6106 5847 1588 189 7 18 chr17 68131227 68131533 -21373020 - AluJo SINE Alu 0 303 1 1973 122 43 30 chr17 68131534 68131837 -21372716 - AluSq SINE Alu -6 307 1 213 182 0 0 chr17 68131884 68131939 -21372614 + (CA)n Simple_repeat Simple_repeat 2 56 0 2264 104 0 49 chr17 68133296 68133624 -21370929 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 68134956 68134999 -21369554 + GC_rich Low_complexity Low_complexity 1 43 0 30 27 0 0 chr17 68135119 68135156 -21369397 + GC_rich Low_complexity Low_complexity 1 37 0 21 82 0 0 chr17 68135252 68135301 -21369252 + GC_rich Low_complexity Low_complexity 1 49 0 371 267 68 23 chr17 68135525 68135701 -21368852 + MER5A DNA MER1_type 6 189 0 202 236 91 27 chr17 68138213 68138323 -21366230 + L2 LINE L2 2859 2975 -338 245 315 54 74 chr17 68138662 68138793 -21365760 + L2 LINE L2 3127 3256 -16 1527 165 24 4 chr17 68138793 68139042 -21365511 + AluJo SINE Alu 45 298 -14 245 315 54 74 chr17 68139042 68139059 -21365494 + L2 LINE L2 3256 3272 0 2435 76 7 0 chr17 68139169 68139471 -21365082 - AluY SINE Alu -7 304 1 266 205 60 72 chr17 68139514 68139597 -21364956 - L2 LINE L2 -21 3292 3211 2223 110 16 3 chr17 68140125 68140433 -21364120 + AluSx SINE Alu 1 312 0 563 146 0 10 chr17 68140677 68140773 -21363780 - AluJb SINE Alu -12 300 206 2370 113 0 7 chr17 68141478 68141788 -21362765 - AluSx SINE Alu -4 308 1 185 303 67 11 chr17 68142528 68142617 -21361936 - L2 LINE L2 -7 3306 3213 2304 114 13 0 chr17 68143664 68143972 -21360581 - AluSx SINE Alu 0 312 1 377 341 8 8 chr17 68145403 68145526 -21359027 + L2 LINE L2 3150 3272 0 228 260 39 39 chr17 68145590 68145667 -21358886 - MER5A DNA MER1_type -1 188 112 2265 94 7 3 chr17 68145686 68145974 -21358579 - AluSx SINE Alu -23 289 1 620 161 8 25 chr17 68145991 68146109 -21358444 - MER5A DNA MER1_type -73 116 1 202 268 0 0 chr17 68147180 68147221 -21357332 + L2 LINE L2 3218 3258 -14 1285 145 5 45 chr17 68147237 68147458 -21357095 + AluJo SINE Alu 1 212 -100 878 233 96 14 chr17 68148362 68148790 -21355763 + LTR33 LTR ERVL 1 521 0 260 354 0 23 chr17 68149072 68149200 -21355353 - MIR SINE MIR -61 147 45 204 158 0 0 chr17 68149752 68149790 -21354763 + C-rich Low_complexity Low_complexity 4 41 0 186 133 0 0 chr17 68149786 68149816 -21354737 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 * 529 183 91 5 chr17 68150094 68150280 -21354273 - MER33 DNA MER1_type -14 349 148 9368 127 28 25 chr17 68150281 68150546 -21354007 - L1MCa LINE L1 -4745 1681 1418 191 36 36 0 chr17 68150546 68150574 -21353979 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9368 127 28 25 chr17 68150574 68151788 -21352765 - L1MCa LINE L1 -5008 1418 194 2304 81 0 3 chr17 68151788 68152071 -21352482 - AluSx SINE Alu -5 307 26 9368 127 28 25 chr17 68152071 68152238 -21352315 - L1MCa LINE L1 -6232 194 29 467 233 58 0 chr17 68152293 68152413 -21352140 - MER33 DNA MER1_type -191 133 7 469 79 53 0 chr17 68152421 68152497 -21352056 - MADE1 DNA Mariner 0 80 1 2161 130 17 0 chr17 68152928 68153227 -21351326 + AluSx SINE Alu 1 304 -8 182 62 31 0 chr17 68155639 68155671 -21348882 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1797 174 3 7 chr17 68156193 68156492 -21348061 - AluJb SINE Alu -14 298 1 510 283 5 64 chr17 68156664 68156851 -21347702 + MIR SINE MIR 7 182 -80 2321 101 13 3 chr17 68157551 68157857 -21346696 - AluSx SINE Alu -3 309 1 391 214 77 34 chr17 68157918 68158035 -21346518 - MER5A DNA MER1_type 0 189 68 219 250 107 36 chr17 68157946 68158058 -21346495 + MER5A DNA MER1_type 36 155 -34 * 929 113 0 0 chr17 68158314 68158447 -21346106 + FLAM_C SINE Alu 1 133 0 1319 191 67 14 chr17 68158970 68159252 -21345301 - AluJo SINE Alu -15 297 1 1920 143 0 26 chr17 68159863 68160170 -21344383 - AluJb SINE Alu -13 299 1 355 294 96 17 chr17 68160332 68160509 -21344044 + L1ME4a LINE L1 1886 2076 -4350 324 297 16 55 chr17 68160440 68160518 -21344035 - L1MC4 LINE L1 -1338 6704 6624 * 1748 184 18 0 chr17 68160518 68160801 -21343752 - AluJb SINE Alu -24 288 1 324 297 16 55 chr17 68160801 68160829 -21343724 - L1MC4 LINE L1 -1418 6624 6601 2352 98 0 13 chr17 68160829 68161134 -21343419 + AluSg SINE Alu 1 301 -9 324 297 16 55 chr17 68161134 68161154 -21343399 - L1MC4 LINE L1 -1441 6601 6582 398 317 34 75 chr17 68161384 68161541 -21343012 - MIR SINE MIR -4 258 115 2263 88 3 0 chr17 68161541 68161859 -21342694 + AluSg SINE Alu 1 310 0 398 317 34 75 chr17 68161859 68161966 -21342587 - MIR SINE MIR -147 115 5 388 297 55 68 chr17 68161973 68162192 -21342361 + L1ME LINE L1 5040 5255 -891 2128 131 0 7 chr17 68162194 68162492 -21342061 - AluSx SINE Alu -16 296 1 423 307 23 23 chr17 68162504 68162719 -21341834 + L1ME LINE L1 5465 5679 -442 483 257 232 42 chr17 68162788 68163638 -21340915 + L1ME4a LINE L1 4425 5494 -932 2320 117 0 0 chr17 68163638 68163945 -21340608 + AluSx SINE Alu 1 307 -5 483 257 232 42 chr17 68163945 68164093 -21340460 + L1ME4a LINE L1 5494 5613 -813 865 160 0 0 chr17 68164104 68164229 -21340324 + FLAM_C SINE Alu 1 125 -18 856 266 132 27 chr17 68164231 68164784 -21339769 + L1ME4a LINE L1 5609 6219 -231 2102 121 13 3 chr17 68164830 68165128 -21339425 + AluSx SINE Alu 1 301 -11 265 204 167 28 chr17 68165524 68165632 -21338921 + L1ME4a LINE L1 6235 6357 -44 360 0 0 0 chr17 68168988 68169028 -21335525 + (CA)n Simple_repeat Simple_repeat 1 40 0 454 351 22 11 chr17 68169028 68169213 -21335340 - MIR SINE MIR -73 189 3 2213 123 0 0 chr17 68169944 68170228 -21334325 + AluSx SINE Alu 1 287 -25 217 86 0 0 chr17 68170228 68170263 -21334290 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2262 78 24 17 chr17 68170312 68170608 -21333945 - AluSp SINE Alu -15 298 1 411 21 0 0 chr17 68170977 68171025 -21333528 + (TG)n Simple_repeat Simple_repeat 2 49 0 422 252 47 0 chr17 68171375 68171502 -21333051 - L1ME4a LINE L1 0 6121 5989 1601 134 119 11 chr17 68171586 68171855 -21332698 - AluJo SINE Alu -4 298 1 266 315 37 46 chr17 68171886 68171994 -21332559 + MER102b DNA MER1_type 232 338 -3 879 273 96 12 chr17 68172057 68172401 -21332152 - L1ME4a LINE L1 -255 5866 5494 2280 72 7 13 chr17 68172620 68172925 -21331628 - AluY SINE Alu -8 303 1 2298 105 0 3 chr17 68172934 68173247 -21331306 - AluSx SINE Alu 0 312 1 311 224 30 0 chr17 68173247 68173314 -21331239 - L1ME4a LINE L1 -813 5333 5265 619 154 4 11 chr17 68173614 68173858 -21330695 - AluJb SINE Alu 0 312 3 474 292 123 5 chr17 68173948 68174143 -21330410 - MIR SINE MIR -25 237 20 1920 128 20 3 chr17 68174293 68174599 -21329954 + AluSx SINE Alu 1 311 -1 448 289 60 20 chr17 68175567 68175716 -21328837 + MIR SINE MIR 14 168 -94 1708 74 43 0 chr17 68175716 68175947 -21328606 + AluSx SINE Alu 58 298 -14 2147 129 0 0 chr17 68176020 68176331 -21328222 - AluSq SINE Alu -2 311 1 219 125 0 0 chr17 68177372 68177412 -21327141 + (GA)n Simple_repeat Simple_repeat 1 40 0 192 111 289 0 chr17 68178423 68178468 -21326085 + MIR SINE MIR 86 143 -119 2013 90 0 28 chr17 68179045 68179364 -21325189 + AluSg SINE Alu 3 313 0 1664 146 7 27 chr17 68179382 68179676 -21324877 + AluJb SINE Alu 1 288 -24 330 280 32 11 chr17 68182150 68182243 -21322310 + MIR SINE MIR 58 152 -56 510 219 192 0 chr17 68182263 68182409 -21322144 + MER5A DNA MER1_type 10 183 -6 343 327 43 37 chr17 68182430 68182593 -21321960 - MER5A DNA MER1_type -8 181 8 2279 97 3 0 chr17 68182666 68182975 -21321578 + AluSx SINE Alu 1 310 -2 394 345 72 55 chr17 68183297 68183564 -21320989 + L2 LINE L2 2275 2557 -757 876 124 0 44 chr17 68183564 68183701 -21320852 - FLAM_C SINE Alu -2 131 1 394 345 72 55 chr17 68183701 68183946 -21320607 + L2 LINE L2 2557 2796 -518 2091 105 0 24 chr17 68184040 68184334 -21320219 - AluSx SINE Alu -25 287 1 463 257 178 7 chr17 68184346 68184498 -21320055 - MER5A DNA MER1_type -6 183 6 231 293 238 17 chr17 68184552 68184842 -21319711 + L2 LINE L2 2917 3270 -2 2100 123 0 0 chr17 68184999 68185300 -21319253 - AluSx SINE Alu -11 301 1 306 262 56 47 chr17 68185503 68185610 -21318943 - MIR SINE MIR -119 143 36 1773 154 0 11 chr17 68186759 68186894 -21317659 + AluJo SINE Alu 1 136 -176 2140 97 3 7 chr17 68186894 68187224 -21317329 + AluSp SINE Alu 1 313 0 1773 154 0 11 chr17 68187224 68187373 -21317180 + AluJo SINE Alu 136 282 -30 186 43 0 0 chr17 68187376 68187399 -21317154 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 775 257 55 24 chr17 68187517 68187770 -21316783 - MIR SINE MIR 0 262 2 813 90 4 2 chr17 68189046 68189304 -21315249 + AluSx SINE Alu 1 307 -2 2016 106 28 0 chr17 68190415 68190698 -21313855 - AluSx SINE Alu -21 291 1 2249 113 0 0 chr17 68192339 68192649 -21311904 - AluSq SINE Alu -3 310 1 249 33 0 0 chr17 68192958 68192988 -21311565 + (CAG)n Simple_repeat Simple_repeat 1 30 0 2041 107 7 3 chr17 68193475 68193773 -21310780 - AluSx SINE Alu -13 299 1 640 247 105 53 chr17 68193853 68194100 -21310453 + MIR SINE MIR 2 261 -1 28 48 0 0 chr17 68194430 68194472 -21310081 + AT_rich Low_complexity Low_complexity 1 42 0 2288 96 0 16 chr17 68195992 68196305 -21308248 + AluSx SINE Alu 1 308 -4 1775 144 31 7 chr17 68196848 68197139 -21307414 + AluJo SINE Alu 1 298 -14 2337 91 3 0 chr17 68197146 68197455 -21307098 + AluSp SINE Alu 1 310 -3 223 289 0 66 chr17 68197684 68197760 -21306793 - L2 LINE L2 -10 3303 3233 2312 88 0 13 chr17 68198375 68198682 -21305871 - AluSx SINE Alu -9 303 1 670 240 47 26 chr17 68198950 68199142 -21305411 + MLT1J1 LTR MaLR 244 439 -7 1953 121 0 10 chr17 68199164 68199454 -21305099 + AluSg SINE Alu 1 287 -23 1785 277 115 20 chr17 68199525 68200340 -21304213 - L1MC4 LINE L1 -2 8040 7110 1821 137 14 0 chr17 68200340 68200641 -21303912 - AluSx SINE Alu 0 305 1 1785 277 115 20 chr17 68200641 68200825 -21303728 - L1MC4 LINE L1 -932 7110 6945 3959 142 62 0 chr17 68200830 68201471 -21303082 - L1PA16 LINE L1 -5 6161 5481 2119 111 3 0 chr17 68201471 68201768 -21302785 - AluSx SINE Alu -14 298 1 1849 117 0 0 chr17 68201779 68202044 -21302509 - AluY SINE Alu -8 303 39 461 312 202 44 chr17 68202158 68202502 -21302051 - L2 LINE L2 -217 3096 2808 2109 123 0 0 chr17 68202502 68202804 -21301749 - AluSx SINE Alu -10 302 1 461 312 202 44 chr17 68202804 68203025 -21301528 - L2 LINE L2 -505 2808 2623 2738 76 28 11 chr17 68203025 68203380 -21301173 + THE1B LTR MaLR 1 361 -3 461 312 202 44 chr17 68203380 68203555 -21300998 - L2 LINE L2 -690 2623 2222 1113 153 10 10 chr17 68203620 68203823 -21300730 + Charlie4a DNA MER1_type 50 252 -256 904 196 67 19 chr17 68203809 68204018 -21300535 + Charlie4a DNA MER1_type 274 492 -16 * 504 307 235 28 chr17 68204021 68205453 -21299100 - L2 LINE L2 -1122 2192 464 2176 105 0 13 chr17 68205701 68206015 -21298538 + AluSg SINE Alu 1 310 0 2036 104 0 0 chr17 68206060 68206340 -21298213 - AluSx SINE Alu -19 293 14 307 207 49 49 chr17 68206501 68206583 -21297970 + HAL1b LINE L1 1055 1136 -212 22 0 0 0 chr17 68206694 68206716 -21297837 + AT_rich Low_complexity Low_complexity 1 22 0 1548 162 73 0 chr17 68206746 68207018 -21297535 - AluJo SINE Alu -14 298 7 2451 198 9 11 chr17 68208140 68208370 -21296183 + MER66B LTR ERV1 28 258 -228 1906 126 33 3 chr17 68208370 68208671 -21295882 + AluSx SINE Alu 3 312 0 2451 198 9 11 chr17 68208671 68208900 -21295653 + MER66B LTR ERV1 258 486 0 276 262 215 19 chr17 68208906 68209013 -21295540 - L2 LINE L2 -6 3307 3180 353 344 61 38 chr17 68209139 68209401 -21295152 - L2 LINE L2 -442 2872 2605 467 114 4 2 chr17 68209402 68209631 -21294922 + AluSx SINE Alu 27 302 -9 746 204 27 107 chr17 68210670 68210742 -21293811 + MER3 DNA MER1_type 3 79 -130 2137 119 0 0 chr17 68210742 68211053 -21293500 + AluSx SINE Alu 1 311 -1 746 204 27 107 chr17 68211053 68211205 -21293348 + MER3 DNA MER1_type 79 209 0 284 282 136 18 chr17 68212284 68212394 -21292159 - MIR SINE MIR -79 183 61 2239 99 3 0 chr17 68213270 68213572 -21290981 - AluSg SINE Alu -7 303 1 234 0 0 0 chr17 68214122 68214148 -21290405 + (T)n Simple_repeat Simple_repeat 1 26 0 20158 49 0 9 chr17 68214187 68217468 -21287085 + L1PA6 LINE L1 2872 6147 -7 506 222 17 148 chr17 68218527 68218824 -21285729 + MIR SINE MIR 5 262 0 2824 6 0 0 chr17 68219709 68220022 -21284531 + AluYb8 SINE Alu 1 313 -5 1932 126 14 7 chr17 68220581 68220867 -21283686 + AluSx SINE Alu 1 288 -24 2241 121 0 0 chr17 68221105 68221403 -21283150 - AluSx SINE Alu -14 298 1 328 302 0 0 chr17 68223220 68223306 -21281247 + MIR SINE MIR 60 145 -117 1074 140 0 8 chr17 68223406 68223882 -21280671 + (CCA)n Simple_repeat Simple_repeat 1 472 0 1098 124 1 14 chr17 68223897 68224327 -21280226 + (CCA)n Simple_repeat Simple_repeat 1 600 0 1098 112 0 0 chr17 68224327 68224505 -21280048 + (CCA)n Simple_repeat Simple_repeat 3 180 0 932 133 0 6 chr17 68224978 68225159 -21279394 + (CCA)n Simple_repeat Simple_repeat 1 180 0 183 235 0 0 chr17 68225194 68225245 -21279308 + (CCA)n Simple_repeat Simple_repeat 1 51 0 258 32 0 0 chr17 68226284 68226315 -21278238 + (A)n Simple_repeat Simple_repeat 1 31 0 2070 102 46 0 chr17 68226936 68227219 -21277334 - AluSx SINE Alu -16 296 1 330 322 164 19 chr17 68227307 68227521 -21277032 - MARNA DNA Mariner -82 504 260 1794 143 3 83 chr17 68227634 68227970 -21276583 + AluJb SINE Alu 1 309 -3 380 226 105 8 chr17 68228027 68228139 -21276414 + L1MB8 LINE L1 6039 6167 -17 2351 79 7 3 chr17 68228139 68228431 -21276122 - AluSq SINE Alu -20 293 1 380 226 105 8 chr17 68228431 68228451 -21276102 + L1MB8 LINE L1 6167 6184 0 705 321 156 45 chr17 68228693 68229269 -21275284 - L2 LINE L2 -639 2675 2164 694 137 137 0 chr17 68229269 68229386 -21275167 + FLAM_C SINE Alu 1 133 0 705 321 156 45 chr17 68229386 68230072 -21274481 - L2 LINE L2 -1150 2164 1273 1145 251 190 27 chr17 68230080 68230393 -21274160 + L2 LINE L2 2455 2716 -597 2363 95 7 0 chr17 68230393 68230698 -21273855 + AluSp SINE Alu 1 307 -6 1145 251 190 27 chr17 68230698 68231121 -21273432 + L2 LINE L2 2716 3313 0 196 235 99 74 chr17 68231126 68231207 -21273346 - L2 LINE L2 -2055 1259 1177 280 226 71 148 chr17 68232002 68232074 -21272479 - MIR SINE MIR -50 212 157 2382 72 16 10 chr17 68232074 68232380 -21272173 - AluY SINE Alu -3 308 1 280 226 71 148 chr17 68232380 68232462 -21272091 - MIR SINE MIR -105 157 70 532 295 121 55 chr17 68233045 68233142 -21271411 - L2 LINE L2 0 3272 3183 2330 108 3 0 chr17 68233142 68233447 -21271106 - AluSq SINE Alu -7 306 1 532 295 121 55 chr17 68233447 68233872 -21270681 - L2 LINE L2 -89 3183 2706 434 218 0 0 chr17 68233872 68233959 -21270594 - AluJ/FRAM SINE Alu 0 312 226 1369 171 106 36 chr17 68233959 68234233 -21270320 + AluJo SINE Alu 3 295 -7 345 289 19 94 chr17 68234233 68234392 -21270161 - L2 LINE L2 -604 2710 2564 2169 116 14 0 chr17 68234449 68234743 -21269810 - AluSx SINE Alu -14 298 1 930 236 35 0 chr17 68234777 68234980 -21269573 - MIR SINE MIR -38 224 15 454 315 182 17 chr17 68234982 68235578 -21268975 - L2 LINE L2 -767 2547 1769 268 291 68 19 chr17 68235743 68235846 -21268707 - L2 LINE L2 -13 3300 3193 1878 119 45 11 chr17 68236575 68236877 -21267676 + AluSx SINE Alu 19 329 0 200 241 0 37 chr17 68237483 68237537 -21267016 + GA-rich Low_complexity Low_complexity 6 57 0 369 137 0 0 chr17 68287677 68287728 -21216825 - FLAM_A SINE Alu -72 60 10 1283 158 75 45 chr17 68287738 68287806 -21216747 + Tigger2 DNA MER2_type 2418 2482 -236 1625 197 0 23 chr17 68287806 68288116 -21216437 - AluJb SINE Alu -9 303 1 1283 158 75 45 chr17 68288116 68288339 -21216214 + Tigger2 DNA MER2_type 2482 2718 0 3481 147 36 45 chr17 68288339 68288891 -21215662 - L1MC3 LINE L1 -743 5403 5370 2306 119 7 0 chr17 68288891 68289201 -21215352 - AluSx SINE Alu 0 312 1 3481 147 36 45 chr17 68289201 68289349 -21215204 - L1MC3 LINE L1 -776 5370 5222 1348 162 11 86 chr17 68289351 68289629 -21214924 - AluJo SINE Alu -8 304 48 357 99 0 161 chr17 68289640 68289721 -21214832 - L1MC3 LINE L1 -893 5253 5186 309 215 11 75 chr17 68289738 68289831 -21214722 - Charlie1a DNA MER1_type -1242 213 127 584 223 144 0 chr17 68289849 68289988 -21214565 - Charlie1a DNA MER1_type -1296 159 1 2098 105 22 0 chr17 68290221 68290543 -21214010 - AluSc SINE Alu 0 328 1 1673 153 20 0 chr17 68290647 68290896 -21213657 - AluJo SINE Alu -58 254 1 9704 184 127 36 chr17 68291040 68291364 -21213189 + L1MD1 LINE L1 42 335 -6205 1583 220 35 35 chr17 68291364 68291525 -21213028 + MLT1A2 LTR MaLR 3 163 -211 2012 125 7 30 chr17 68291525 68291830 -21212723 + AluSx SINE Alu 1 298 -14 1583 220 35 35 chr17 68291830 68292040 -21212513 + MLT1A2 LTR MaLR 162 374 0 9704 184 127 36 chr17 68292040 68292611 -21211942 + L1MD1 LINE L1 335 853 -5687 2038 126 33 3 chr17 68292611 68292912 -21211641 - AluSp SINE Alu -3 310 1 9704 184 127 36 chr17 68292912 68293857 -21210696 + L1MD1 LINE L1 853 1711 -4829 225 0 0 0 chr17 68293857 68293882 -21210671 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2046 107 0 7 chr17 68293885 68294157 -21210396 - AluSx SINE Alu -42 270 1 9704 184 127 36 chr17 68294157 68294965 -21209588 + L1MD1 LINE L1 1712 2937 -3603 3979 238 36 40 chr17 68294953 68295691 -21208862 + L1MD1 LINE L1 3201 3940 -2600 * 1836 150 0 18 chr17 68295691 68295977 -21208576 + AluJb SINE Alu 3 283 -29 3979 238 36 40 chr17 68295977 68297129 -21207424 + L1MD1 LINE L1 3940 5052 -1488 21 36 0 0 chr17 68297914 68297942 -21206611 + AT_rich Low_complexity Low_complexity 1 28 0 4083 163 54 54 chr17 68298060 68298597 -21205956 + L1MD1 LINE L1 5066 5602 -1034 6252 85 17 21 chr17 68298597 68299393 -21205160 + L1PA14 LINE L1 4897 5673 -488 2454 61 27 0 chr17 68299393 68299688 -21204865 + AluY SINE Alu 1 303 -8 6252 85 17 21 chr17 68299688 68300166 -21204387 + L1PA14 LINE L1 5673 6152 -9 4083 163 54 54 chr17 68300166 68300579 -21203974 + L1MD1 LINE L1 5602 6014 -622 2413 67 6 22 chr17 68300579 68300892 -21203661 + AluSq SINE Alu 1 308 -5 2322 115 0 0 chr17 68300902 68301214 -21203339 + AluSx SINE Alu 1 312 0 4083 163 54 54 chr17 68301214 68301667 -21202886 + L1MD1 LINE L1 6023 6461 -175 2375 76 3 3 chr17 68301750 68302052 -21202501 + AluY SINE Alu 1 302 -9 232 303 10 20 chr17 68302244 68302343 -21202210 - L2 LINE L2 -527 2787 2690 2272 201 83 23 chr17 68302348 68302949 -21201604 - L1MC4 LINE L1 -329 7713 7077 1064 182 0 0 chr17 68303103 68303279 -21201274 - AluSg/x SINE Alu 0 312 137 2159 139 0 0 chr17 68303968 68304278 -21200275 + AluSx SINE Alu 1 310 -2 265 324 137 52 chr17 68304437 68304889 -21199664 - L2 LINE L2 -480 2834 2422 2220 88 16 26 chr17 68304889 68305056 -21199497 - AluSq SINE Alu -9 304 140 2037 84 0 118 chr17 68305056 68305388 -21199165 - AluSc SINE Alu -16 293 1 2220 88 16 26 chr17 68305388 68305527 -21199026 - AluSq SINE Alu -173 140 1 2033 130 10 3 chr17 68305530 68305829 -21198724 - AluJo SINE Alu -11 301 1 265 324 137 52 chr17 68305829 68305913 -21198640 - L2 LINE L2 -893 2421 2248 2160 121 3 0 chr17 68306157 68306454 -21198099 - AluSx SINE Alu -14 298 1 2238 54 0 0 chr17 68306531 68306789 -21197764 + AluSc SINE Alu 52 309 0 2174 125 3 0 chr17 68308049 68308353 -21196200 + AluSx SINE Alu 1 305 -7 280 312 142 7 chr17 68308977 68309118 -21195435 - MARNA DNA Mariner -255 331 172 400 317 25 0 chr17 68309118 68309238 -21195315 + L2 LINE L2 3150 3272 0 1546 108 0 0 chr17 68309324 68309528 -21195025 + AluSg/x SINE Alu 98 301 -9 1983 149 21 54 chr17 68309533 68309921 -21194632 - THE1C LTR MaLR 0 375 1 1264 141 224 107 chr17 68309971 68310297 -21194256 + MSTA LTR MaLR 1 428 0 484 139 51 0 chr17 68311055 68311134 -21193419 + AluJ/FLAM SINE Alu 1 83 -229 919 117 0 44 chr17 68311134 68311271 -21193282 + AluSg/x SINE Alu 166 296 -16 2097 132 3 13 chr17 68311922 68312233 -21192320 + AluSx SINE Alu 1 308 -4 455 226 32 16 chr17 68313255 68313379 -21191174 - MIR3 SINE MIR -13 195 70 1809 127 112 0 chr17 68313458 68313726 -21190827 - AluSx SINE Alu -14 298 1 2025 121 25 0 chr17 68314248 68314559 -21189994 + AluSc SINE Alu 1 318 0 271 210 185 0 chr17 68314687 68314768 -21189785 - MER96B DNA MER1_type? 0 417 322 2222 134 0 0 chr17 68314805 68315110 -21189443 + AluSq SINE Alu 1 305 -8 1133 214 5 0 chr17 68315111 68315317 -21189236 - MER2 DNA MER2_type -138 207 1 448 138 0 0 chr17 68315506 68315571 -21188982 - MER58 DNA MER1_type -1 2419 2355 770 143 7 65 chr17 68315717 68315871 -21188682 + MER96B DNA MER1_type? 91 235 -182 360 0 0 0 chr17 68315905 68315945 -21188608 + (TG)n Simple_repeat Simple_repeat 2 41 0 2379 98 3 0 chr17 68316234 68316541 -21188012 - AluSq SINE Alu -5 308 1 532 235 10 0 chr17 68316911 68317013 -21187540 - MER81 DNA DNA -6 108 6 676 121 0 0 chr17 68317027 68317126 -21187427 + AluSg/x SINE Alu 198 296 -16 264 167 0 0 chr17 68317803 68317851 -21186702 + (CA)n Simple_repeat Simple_repeat 1 48 0 238 189 67 89 chr17 68318368 68318458 -21186095 + L2 LINE L2 3182 3269 -44 1625 184 23 23 chr17 68318471 68318776 -21185777 + AluJo SINE Alu 1 305 -7 323 273 23 0 chr17 68318809 68318897 -21185656 + L1MC4 LINE L1 6614 6703 -1339 226 87 0 0 chr17 68318905 68318951 -21185602 + LTR66 LTR ERVL 394 439 -171 2359 113 0 0 chr17 68318962 68319272 -21185281 - AluSx SINE Alu -2 310 1 201 74 0 0 chr17 68320381 68320408 -21184145 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2251 85 0 3 chr17 68321164 68321538 -21183015 - AluY SINE Alu 0 373 1 2123 216 47 21 chr17 68321728 68322200 -21182353 - LTR16C LTR ERVL -6 485 2 237 65 0 0 chr17 68322735 68322766 -21181787 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1076 225 59 26 chr17 68322875 68323146 -21181407 + LTR16C LTR ERVL 1 280 -211 300 336 80 0 chr17 68323613 68323738 -21180815 - MIR3 SINE MIR -18 190 56 352 349 20 0 chr17 68324225 68324371 -21180182 + MIR SINE MIR 69 217 -45 1344 213 127 62 chr17 68324935 68325432 -21179121 + MLT1F LTR MaLR 1 529 -13 2175 117 3 3 chr17 68325449 68325747 -21178806 + AluSg SINE Alu 1 298 -12 201 204 20 20 chr17 68325794 68325843 -21178710 + MIR SINE MIR 85 133 -75 1145 179 5 31 chr17 68327168 68327391 -21177162 + MER20 DNA MER1_type 1 217 -2 180 0 0 0 chr17 68327423 68327443 -21177110 + (A)n Simple_repeat Simple_repeat 1 20 0 302 355 0 8 chr17 68327682 68327803 -21176750 + MIR SINE MIR 28 147 -115 2263 100 0 0 chr17 68328143 68328465 -21176088 + AluSx SINE Alu 1 312 0 1560 176 4 8 chr17 68328472 68328739 -21175814 + AluJb SINE Alu 1 266 -46 394 301 86 16 chr17 68328739 68328925 -21175628 + MIR SINE MIR 52 250 -12 2214 109 3 20 chr17 68328956 68329119 -21175434 - AluSx SINE Alu -15 297 140 2173 102 7 3 chr17 68329119 68329414 -21175139 - AluY SINE Alu -15 296 1 2214 109 3 20 chr17 68329414 68329552 -21175001 - AluSx SINE Alu -172 140 1 2615 119 0 2 chr17 68329858 68330252 -21174301 - L1MA5A LINE L1 -3 6294 5902 1358 117 10 0 chr17 68330450 68330647 -21173906 + AluSg/x SINE Alu 109 307 -5 2217 113 0 19 chr17 68330943 68331261 -21173292 - AluSx SINE Alu 0 312 1 229 182 23 0 chr17 68332173 68332217 -21172336 - MER103 DNA DNA -31 135 91 311 267 224 0 chr17 68332952 68333113 -21171440 - MER117 DNA MER1_type 0 197 1 397 240 17 120 chr17 68333509 68333684 -21170869 + MIR SINE MIR 51 207 -55 1737 173 54 3 chr17 68333938 68334053 -21170500 + AluJb SINE Alu 1 109 -203 498 17 0 0 chr17 68334053 68334112 -21170441 + (CA)n Simple_repeat Simple_repeat 2 60 0 1737 173 54 3 chr17 68334112 68334291 -21170262 + AluJb SINE Alu 109 310 -2 309 340 30 0 chr17 68335009 68335109 -21169444 - MIR SINE MIR -140 122 20 333 185 37 12 chr17 68335218 68335299 -21169254 - MIR SINE MIR -66 196 114 3819 151 38 30 chr17 68335362 68336126 -21168427 + L1MB8 LINE L1 5409 6178 0 713 210 61 22 chr17 68336135 68336316 -21168237 + L1ME2 LINE L1 5328 5515 -649 1166 169 30 38 chr17 68336327 68336563 -21167990 + MER34 LTR ERV1 27 260 -282 900 221 88 0 chr17 68336593 68336797 -21167756 + MER34 LTR ERV1 321 542 0 2850 192 53 25 chr17 68336797 68337029 -21167524 + L1ME2 LINE L1 5512 5736 -428 1874 201 39 10 chr17 68337029 68337412 -21167141 - MSTD LTR MaLR -2 394 1 2850 192 53 25 chr17 68337412 68337814 -21166739 + L1ME2 LINE L1 5736 6164 0 3536 191 241 10 chr17 68337825 68338739 -21165814 + L1MC4 LINE L1 6390 7514 -528 211 195 0 24 chr17 68338746 68338787 -21165766 + GA-rich Low_complexity Low_complexity 6 45 0 464 181 86 0 chr17 68338787 68338892 -21165661 + L1MC4 LINE L1 7929 8042 0 2026 266 38 8 chr17 68338915 68339412 -21165141 + LTR40a LTR ERVL 1 512 -7 28 0 0 0 chr17 68339767 68339795 -21164758 + AT_rich Low_complexity Low_complexity 1 28 0 1850 204 14 8 chr17 68339925 68340288 -21164265 + MLT1A1 LTR MaLR 1 365 0 377 279 131 47 chr17 68340324 68340501 -21164052 - L1ME4a LINE L1 -1 6120 5907 2349 112 0 0 chr17 68340501 68340813 -21163740 - AluSx SINE Alu 0 312 1 377 279 131 47 chr17 68340813 68340932 -21163621 - L1ME4a LINE L1 -214 5907 5799 2082 156 3 30 chr17 68340961 68341334 -21163219 + THE1C LTR MaLR 1 363 -12 1782 151 0 11 chr17 68341340 68341611 -21162942 + AluJo SINE Alu 22 289 -23 2327 119 0 0 chr17 68342156 68342468 -21162085 + AluSx SINE Alu 1 312 0 2320 60 40 17 chr17 68342490 68342789 -21161764 - AluY SINE Alu -5 306 1 836 165 152 0 chr17 68343578 68343742 -21160811 - MER5A DNA MER1_type 0 189 1 2403 118 39 14 chr17 68343900 68344255 -21160298 + THE1B LTR MaLR 1 364 0 420 245 0 10 chr17 68344288 68344390 -21160163 - MER5A DNA MER1_type -80 109 9 297 268 45 45 chr17 68344399 68344511 -21160042 + MIR SINE MIR 3 114 -148 2489 220 76 47 chr17 68344779 68345552 -21159001 - L1ME LINE L1 -5269 801 6 261 226 104 85 chr17 68345955 68346061 -21158492 + LTR16C LTR ERVL 136 243 -248 2265 101 0 3 chr17 68346292 68346617 -21157936 - AluSx SINE Alu 0 324 1 2259 113 0 19 chr17 68349633 68349951 -21154602 - AluSq SINE Alu 0 313 2 668 270 88 22 chr17 68350624 68350850 -21153703 - MLT1K LTR MaLR -78 510 270 2139 116 3 0 chr17 68350878 68351163 -21153390 + AluSx SINE Alu 1 286 -26 270 0 0 0 chr17 68351164 68351194 -21153359 + (TATAA)n Simple_repeat Simple_repeat 3 32 0 1012 276 116 33 chr17 68351979 68352392 -21152161 + LTR16C LTR ERVL 1 455 -36 2081 146 3 10 chr17 68352392 68352565 -21151988 - AluSx SINE Alu -6 306 134 2396 101 0 0 chr17 68352565 68352871 -21151682 - AluSg SINE Alu -4 306 1 2081 146 3 10 chr17 68352871 68353005 -21151548 - AluSx SINE Alu -178 134 1 1012 276 116 33 chr17 68353005 68353040 -21151513 + LTR16C LTR ERVL 455 486 -5 421 301 15 7 chr17 68353497 68353633 -21150920 - MLT1K LTR MaLR -390 159 23 731 110 0 0 chr17 68355246 68355346 -21149207 - LTR12 LTR ERV1 -133 581 482 320 221 0 23 chr17 68355348 68355434 -21149119 - LTR30 LTR ERV1 -79 643 560 775 139 66 46 chr17 68355442 68355593 -21148960 - LTR12 LTR ERV1 -429 285 132 284 211 0 0 chr17 68355602 68355654 -21148899 - LTR30 LTR ERV1 -670 52 1 789 207 83 81 chr17 68355660 68356061 -21148492 + MLT1H1 LTR MaLR 36 524 -43 655 304 82 44 chr17 68356175 68356420 -21148133 - L2 LINE L2 0 3313 3079 1649 133 268 6 chr17 68356420 68356759 -21147794 + MSTA LTR MaLR 1 428 0 655 304 82 44 chr17 68356759 68357167 -21147386 - L2 LINE L2 -234 3079 2634 2280 113 0 3 chr17 68358067 68358367 -21146186 + AluSx SINE Alu 1 299 -13 2234 111 3 0 chr17 68358379 68358676 -21145877 + AluSx SINE Alu 1 298 -14 542 235 17 0 chr17 68358978 68359093 -21145460 + MER58A DNA MER1_type 28 144 0 318 340 69 42 chr17 68359120 68359382 -21145171 + L2 LINE L2 2916 3184 -88 1970 120 3 9 chr17 68359382 68359761 -21144792 - MER4A LTR ERV1 0 664 252 875 193 221 12 chr17 68359785 68360106 -21144447 - Zaphod DNA AcHobo -59 3972 3585 * 2405 194 51 11 chr17 68360073 68360899 -21143654 - Zaphod DNA AcHobo -3026 1005 102 2101 110 24 3 chr17 68360899 68361189 -21143364 - AluSx SINE Alu -16 296 1 2405 194 51 11 chr17 68361189 68361295 -21143258 - Zaphod DNA AcHobo -3929 102 2 297 278 0 0 chr17 68361296 68361368 -21143185 + L2 LINE L2 3185 3256 -16 1278 168 4 39 chr17 68361475 68361659 -21142894 - MER58A DNA MER1_type -2196 224 48 1776 169 48 7 chr17 68361659 68361780 -21142773 + AluJo SINE Alu 1 116 -196 219 69 0 0 chr17 68361780 68361809 -21142744 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1776 169 48 7 chr17 68361809 68361977 -21142576 + AluJo SINE Alu 116 302 -10 1278 168 4 39 chr17 68361977 68362024 -21142529 - MER58A DNA MER1_type -2372 48 1 248 234 40 154 chr17 68362295 68362368 -21142185 - MER5B DNA MER1_type 0 178 98 1506 181 41 101 chr17 68362368 68362543 -21142010 - MLT1B LTR MaLR 0 390 206 2290 99 10 0 chr17 68362543 68362837 -21141716 - AluSc SINE Alu -12 297 1 1506 181 41 101 chr17 68362837 68363076 -21141477 - MLT1B LTR MaLR -184 206 1 248 234 40 154 chr17 68363076 68363203 -21141350 - MER5B DNA MER1_type -80 98 1 2065 150 0 0 chr17 68363774 68364074 -21140479 + AluSx SINE Alu 1 300 -12 1312 258 75 44 chr17 68364189 68364592 -21139961 + LTR33 LTR ERVL 55 475 -46 1777 161 3 30 chr17 68364592 68364890 -21139663 + AluJb SINE Alu 3 292 -20 1312 258 75 44 chr17 68364890 68364939 -21139614 + LTR33 LTR ERVL 475 521 0 543 292 59 51 chr17 68365275 68365312 -21139241 - L1ME2 LINE L1 -301 5863 5828 2089 137 0 3 chr17 68365312 68365604 -21138949 - AluSx SINE Alu -21 291 1 543 292 59 51 chr17 68365604 68365626 -21138927 - L1ME2 LINE L1 -336 5828 5808 2274 125 0 0 chr17 68365626 68365937 -21138616 - AluSx SINE Alu -1 311 1 543 292 59 51 chr17 68365937 68366363 -21138190 - L1ME2 LINE L1 -356 5808 5439 1279 187 30 111 chr17 68366493 68366889 -21137664 - MLT1A1 LTR MaLR 0 365 2 377 231 0 0 chr17 68367247 68367325 -21137228 - LTR33A LTR ERVL -2 521 444 242 313 61 17 chr17 68367516 68367631 -21136922 - MLT2E LTR ERVL -473 155 36 25 0 0 0 chr17 68368171 68368196 -21136357 + AT_rich Low_complexity Low_complexity 1 25 0 237 33 0 0 chr17 68368288 68368318 -21136235 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 525 16 0 0 chr17 68368317 68368379 -21136174 + (CA)n Simple_repeat Simple_repeat 1 62 0 1943 118 69 114 chr17 68368546 68368951 -21135602 + MSTD LTR MaLR 10 396 0 1859 155 10 13 chr17 68369355 68369665 -21134888 + AluSx SINE Alu 1 309 -3 333 263 35 0 chr17 68369690 68369804 -21134749 - MIR SINE MIR -52 210 93 483 216 51 76 chr17 68370198 68370434 -21134119 + L2 LINE L2 1633 1862 -1452 943 295 167 21 chr17 68370435 68371000 -21133553 + L2 LINE L2 2217 2698 -615 1469 138 0 0 chr17 68371000 68371203 -21133350 - AluJb SINE Alu -109 203 1 943 295 167 21 chr17 68371203 68371589 -21132964 + L2 LINE L2 2698 3312 -1 2489 50 0 17 chr17 68371593 68371890 -21132663 + AluY SINE Alu 2 293 -18 1986 167 3 0 chr17 68372070 68372376 -21132177 + AluJo SINE Alu 1 307 -5 216 0 0 0 chr17 68373048 68373072 -21131481 + (A)n Simple_repeat Simple_repeat 1 24 0 300 200 0 38 chr17 68373953 68374033 -21130520 - L1MC5 LINE L1 -54 7907 7831 325 98 0 0 chr17 68374081 68374122 -21130431 + LTR56 LTR ERV1 350 390 -55 22 35 0 0 chr17 68374177 68374206 -21130347 + AT_rich Low_complexity Low_complexity 1 29 0 2158 130 0 7 chr17 68374301 68374609 -21129944 - AluSx SINE Alu -6 306 1 1741 189 11 57 chr17 68374779 68375010 -21129543 - MLT1A2 LTR MaLR -4 370 161 1833 172 7 0 chr17 68375010 68375300 -21129253 + AluJb SINE Alu 1 292 -20 1741 189 11 57 chr17 68375300 68375438 -21129115 - MLT1A2 LTR MaLR -213 161 18 2213 104 27 0 chr17 68376044 68376343 -21128210 + AluSp SINE Alu 1 307 -6 2813 142 0 7 chr17 68376382 68376791 -21127762 - L1PA16 LINE L1 -3 6163 5758 638 314 20 24 chr17 68376942 68377190 -21127363 + MIR SINE MIR 16 262 0 1999 103 4 0 chr17 68378437 68378700 -21125853 - AluSx SINE Alu -10 302 39 31 68 0 0 chr17 68378747 68378806 -21125747 + AT_rich Low_complexity Low_complexity 1 59 0 2285 90 0 3 chr17 68379241 68379541 -21125012 - AluSx SINE Alu -13 299 1 440 206 153 15 chr17 68379568 68379699 -21124854 + MER3 DNA MER1_type 61 209 0 284 200 40 27 chr17 68379753 68379828 -21124725 + MIR SINE MIR 74 149 -113 281 366 44 72 chr17 68380338 68380575 -21123978 + L2 LINE L2 2922 3147 -125 2164 192 8 74 chr17 68380575 68381075 -21123478 + MLT1C LTR MaLR 1 467 0 281 366 44 72 chr17 68381075 68381198 -21123355 + L2 LINE L2 3147 3272 0 1985 119 56 0 chr17 68381271 68381557 -21122996 - AluSx SINE Alu -10 302 1 1139 229 0 30 chr17 68381801 68382032 -21122521 + MER58A DNA MER1_type 1 224 0 22 35 0 0 chr17 68382766 68382795 -21121758 + AT_rich Low_complexity Low_complexity 1 29 0 1944 162 3 0 chr17 68382991 68383287 -21121266 - AluJb SINE Alu -15 297 1 242 365 101 32 chr17 68383323 68383659 -21120894 + L2 LINE L2 1008 1319 -1995 1565 129 4 4 chr17 68383659 68383884 -21120669 - AluSx SINE Alu -77 235 11 242 365 101 32 chr17 68383884 68384272 -21120281 + L2 LINE L2 1319 1782 -1532 660 318 81 60 chr17 68384303 68385054 -21119499 + L1MEd LINE L1 19 802 -5317 1624 115 0 5 chr17 68385054 68385271 -21119282 - AluSg/x SINE Alu -18 294 79 660 318 81 60 chr17 68385271 68385624 -21118929 + L1MEd LINE L1 802 1146 -4973 709 217 40 29 chr17 68385624 68385799 -21118754 + MLT1I LTR MaLR 1 177 -232 805 137 0 15 chr17 68385805 68385936 -21118617 + FRAM SINE Alu 39 167 -9 243 0 0 0 chr17 68385977 68386004 -21118549 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 774 294 45 0 chr17 68386005 68386206 -21118347 + MLT1I LTR MaLR 200 409 0 203 351 142 7 chr17 68386383 68386531 -21118022 - MIR SINE MIR -74 188 21 498 326 37 21 chr17 68386551 68386738 -21117815 - MIR SINE MIR -71 191 2 706 256 191 38 chr17 68386786 68386945 -21117608 + L2 LINE L2 2854 2987 -326 1831 118 0 44 chr17 68386945 68387240 -21117313 - AluJb SINE Alu 0 307 25 706 256 191 38 chr17 68387240 68387478 -21117075 + L2 LINE L2 2987 3313 0 2442 91 0 0 chr17 68387678 68387987 -21116566 - AluSx SINE Alu -3 309 1 2243 102 0 3 chr17 68387988 68388283 -21116270 - AluSx SINE Alu -18 294 1 536 254 0 51 chr17 68388515 68388653 -21115900 - MIR SINE MIR -85 177 47 1372 185 128 62 chr17 68388661 68388855 -21115698 + MLT1C LTR MaLR 1 181 -286 2323 120 0 0 chr17 68388855 68389163 -21115390 + AluSx SINE Alu 1 308 -4 1372 185 128 62 chr17 68389163 68389406 -21115147 + MLT1C LTR MaLR 181 467 0 2264 88 0 29 chr17 68390656 68390963 -21113590 - AluSx SINE Alu -14 298 1 23 33 0 0 chr17 68391382 68391412 -21113141 + AT_rich Low_complexity Low_complexity 1 30 0 1102 108 42 12 chr17 68392304 68392470 -21112083 + AluSg/x SINE Alu 124 294 -18 2068 81 92 4 chr17 68392472 68392745 -21111808 + AluSx SINE Alu 1 297 -15 2782 206 48 107 chr17 68392901 68392968 -21111585 + L1MC5 LINE L1 6502 6571 -1390 917 146 8 0 chr17 68392968 68393098 -21111455 + FLAM_C SINE Alu 1 131 -2 2782 206 48 107 chr17 68393098 68394203 -21110350 + L1MC5 LINE L1 6571 7530 -431 377 273 46 46 chr17 68394296 68394490 -21110063 + L1ME3A LINE L1 5962 6155 -15 3652 190 61 33 chr17 68394533 68395406 -21109147 - L1ME1 LINE L1 0 6166 5270 1280 227 11 0 chr17 68395411 68395689 -21108864 - L1ME1 LINE L1 -1253 4893 4613 302 353 53 0 chr17 68396283 68396453 -21108100 + L1MEc LINE L1 1220 1398 -5427 705 162 0 120 chr17 68396480 68396558 -21107995 + AluJo/FLAM SINE Alu 2 88 -224 2256 74 0 11 chr17 68396558 68396866 -21107687 - AluY SINE Alu 0 305 1 705 162 0 120 chr17 68396866 68396921 -21107632 + AluJo/FLAM SINE Alu 88 121 -191 2204 113 3 0 chr17 68396921 68397214 -21107339 - AluSp SINE Alu -19 294 1 1123 273 46 73 chr17 68397228 68398057 -21106496 + L1MEc LINE L1 1280 2224 -4601 423 249 6 110 chr17 68400359 68400532 -21104021 + MIR SINE MIR 34 188 -74 216 0 0 0 chr17 68400922 68400946 -21103607 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2331 103 0 0 chr17 68400950 68401242 -21103311 - AluSg SINE Alu -18 292 1 347 183 0 0 chr17 68401280 68401340 -21103213 - MIR SINE MIR -119 143 84 857 340 45 10 chr17 68401374 68401792 -21102761 + L2 LINE L2 2325 2757 -557 214 26 79 0 chr17 68401800 68401838 -21102715 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2345 96 0 0 chr17 68401840 68402132 -21102421 - AluSx SINE Alu -20 292 1 201 288 88 38 chr17 68402244 68402324 -21102229 + L2 LINE L2 3144 3227 -45 1746 152 35 7 chr17 68402408 68402691 -21101862 + AluJo SINE Alu 1 291 -21 1961 117 62 3 chr17 68402704 68402994 -21101559 - AluSx SINE Alu -5 307 1 920 142 62 0 chr17 68403020 68403182 -21101371 - L1MB7 LINE L1 -19 6165 5994 1329 216 151 51 chr17 68403191 68403640 -21100913 + MLT1E2 LTR MaLR 133 626 0 219 69 0 0 chr17 68403706 68403735 -21100818 + (TTC)n Simple_repeat Simple_repeat 1 29 0 1914 121 0 38 chr17 68403735 68404024 -21100529 - AluSx SINE Alu -34 278 1 2308 181 6 3 chr17 68404261 68404625 -21099928 + MLT1A1 LTR MaLR 1 365 0 469 215 81 20 chr17 68405067 68405216 -21099337 + L1MB7 LINE L1 4256 4413 -1733 * 4364 170 18 33 chr17 68405205 68406047 -21098506 + L1MB7 LINE L1 5355 6183 -1 532 264 56 56 chr17 68407511 68407602 -21096951 - L1MC4a LINE L1 -1884 5924 5834 1696 166 3 28 chr17 68407602 68407922 -21096631 - AluJo SINE Alu 0 318 6 2412 85 0 10 chr17 68407930 68408237 -21096316 - AluSg SINE Alu -6 304 1 532 264 56 56 chr17 68408237 68408438 -21096115 - L1MC4a LINE L1 -1980 5828 5622 977 161 79 79 chr17 68408474 68408754 -21095799 - L1MC4 LINE L1 0 8042 7763 309 207 243 0 chr17 68408760 68408871 -21095682 - L1MC4 LINE L1 -1444 6598 6461 228 67 0 0 chr17 68409035 68409065 -21095488 + (TA)n Simple_repeat Simple_repeat 2 31 0 1332 125 48 10 chr17 68409065 68409273 -21095280 - AluJb SINE Alu -4 308 93 2217 113 3 0 chr17 68409554 68409847 -21094706 + AluSx SINE Alu 2 295 -17 611 262 67 24 chr17 68409874 68410125 -21094428 - L1M4 LINE L1 -1488 4658 4408 323 270 163 42 chr17 68410125 68410462 -21094091 - L1ME4a LINE L1 -115 6006 4348 2250 129 0 3 chr17 68410474 68410785 -21093768 - AluSx SINE Alu 0 312 3 2079 81 0 0 chr17 68410802 68411060 -21093493 - AluSg SINE Alu -18 292 35 2200 102 3 0 chr17 68411062 68411357 -21093196 - AluSp SINE Alu -17 296 1 2137 171 39 31 chr17 68411550 68412093 -21092460 + MLT2A2 LTR ERVL 1 554 0 1684 120 53 83 chr17 68412587 68412790 -21091763 + AluSx SINE Alu 1 194 -118 2160 98 0 3 chr17 68412790 68413076 -21091477 + AluSg SINE Alu 13 297 -13 1684 120 53 83 chr17 68413076 68413173 -21091380 + AluSx SINE Alu 194 292 -20 2271 107 0 7 chr17 68413581 68413881 -21090672 - AluSg SINE Alu -12 298 1 1129 118 0 12 chr17 68414051 68414220 -21090333 - AluSg/x SINE Alu -2 310 144 21 0 0 0 chr17 68414220 68414241 -21090312 + AT_rich Low_complexity Low_complexity 1 21 0 1529 253 100 75 chr17 68414920 68415114 -21089439 + Tigger8 DNA MER2_type 2 190 -476 1823 155 40 0 chr17 68415114 68415411 -21089142 - AluJb SINE Alu -2 310 2 1529 253 100 75 chr17 68415411 68415716 -21088837 + Tigger8 DNA MER2_type 190 523 -143 2152 119 7 10 chr17 68415716 68416026 -21088527 + AluSq SINE Alu 1 309 -4 1529 253 100 75 chr17 68416026 68416166 -21088387 + Tigger8 DNA MER2_type 523 658 -8 207 350 126 51 chr17 68416572 68417104 -21087449 - L2 LINE L2 -403 2911 2340 254 214 129 14 chr17 68417243 68417313 -21087240 + MLT1K LTR MaLR 188 265 -323 836 181 20 0 chr17 68418239 68418388 -21086165 - FRAM SINE Alu -14 162 11 497 277 97 20 chr17 68418481 68418676 -21085877 + MIR SINE MIR 45 254 -8 1739 166 3 7 chr17 68418763 68419144 -21085409 + AluJo SINE Alu 1 380 0 2068 142 0 13 chr17 68420000 68420316 -21084237 + AluSx SINE Alu 1 312 0 561 321 69 18 chr17 68420661 68420879 -21083674 - MIR SINE MIR -1 261 33 558 200 145 7 chr17 68420935 68421080 -21083473 - L1ME3 LINE L1 -47 6115 5951 21 118 0 0 chr17 68422436 68422555 -21081998 + GC_rich Low_complexity Low_complexity 1 119 0 27 0 0 0 chr17 68422873 68422900 -21081653 + GC_rich Low_complexity Low_complexity 1 27 0 229 238 16 0 chr17 68424208 68424271 -21080282 + (TA)n Simple_repeat Simple_repeat 1 64 0 1145 192 71 5 chr17 68425137 68425361 -21079192 + MER8 DNA MER2_type 1 239 0 707 259 98 0 chr17 68425370 68425606 -21078947 - MIR SINE MIR -2 260 2 180 0 0 0 chr17 68425909 68425929 -21078624 + (TG)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 68426498 68426521 -21078032 + AT_rich Low_complexity Low_complexity 1 23 0 1798 181 0 3 chr17 68427548 68427847 -21076706 - AluJo SINE Alu -14 298 1 1831 142 63 3 chr17 68427866 68428184 -21076369 + MER1B DNA MER1_type 1 337 0 21 36 0 0 chr17 68428383 68428411 -21076142 + AT_rich Low_complexity Low_complexity 1 28 0 490 327 76 56 chr17 68428808 68429247 -21075306 + L2 LINE L2 2686 3133 -139 1983 146 0 10 chr17 68429247 68429548 -21075005 - AluSx SINE Alu -14 298 1 490 327 76 56 chr17 68429548 68429685 -21074868 + L2 LINE L2 3133 3266 -6 190 264 0 38 chr17 68429931 68429943 -21074610 + L2 LINE L2 3214 3225 -47 1533 223 36 9 chr17 68429943 68430275 -21074278 + MER58B DNA MER1_type 1 341 0 190 264 0 38 chr17 68430275 68430315 -21074238 + L2 LINE L2 3225 3264 -8 30 0 0 0 chr17 68431760 68431790 -21072763 + AT_rich Low_complexity Low_complexity 1 30 0 263 282 12 35 chr17 68431988 68432073 -21072480 + MIR SINE MIR 157 239 -23 4579 60 10 5 chr17 68432796 68433377 -21071176 + LTR10C LTR ERV1 1 584 -7 461 293 42 28 chr17 68434071 68434354 -21070199 - L1MC4a LINE L1 -1813 5995 5709 424 300 67 0 chr17 68434363 68434543 -21070010 + L1M4 LINE L1 3711 3902 -2244 337 281 75 18 chr17 68435188 68435371 -21069182 - L1MEc LINE L1 -768 1587 381 316 302 194 0 chr17 68435380 68435519 -21069034 + L2 LINE L2 62 227 -3087 27 29 0 0 chr17 68435723 68435757 -21068796 + AT_rich Low_complexity Low_complexity 1 34 0 1677 140 11 21 chr17 68435844 68436130 -21068423 + AluJb SINE Alu 1 283 -29 189 107 0 0 chr17 68436130 68436158 -21068395 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 1724 306 205 22 chr17 68436170 68436563 -21067990 + L2 LINE L2 151 471 -2843 1114 162 97 9 chr17 68436563 68436779 -21067774 + MER46A DNA MER2_type 2 236 0 1724 306 205 22 chr17 68436779 68437631 -21066922 + L2 LINE L2 471 1623 -1691 452 263 178 13 chr17 68437649 68437801 -21066752 + L2 LINE L2 426 602 -2712 795 300 75 88 chr17 68437828 68438445 -21066108 - MER21B LTR ERV1 -157 706 98 317 248 165 9 chr17 68438413 68438522 -21066031 - MER77 LTR ERV1 -403 202 77 * 1421 230 32 3 chr17 68438598 68438911 -21065642 + L2 LINE L2 647 968 -2346 10294 172 36 30 chr17 68438912 68441280 -21063273 - L1 LINE L1 -1222 5566 3184 8310 193 30 24 chr17 68441279 68444099 -21060454 - L1 LINE L1 -4270 2519 7 * 1972 134 0 33 chr17 68444349 68444654 -21059899 - AluSx SINE Alu -17 295 1 2231 91 3 26 chr17 68445984 68446293 -21058260 - AluSg SINE Alu -8 302 1 1529 177 18 28 chr17 68446513 68446796 -21057757 - AluJo SINE Alu -28 284 5 378 329 186 34 chr17 68446803 68447395 -21057158 - L2 LINE L2 -1604 1710 1029 2410 70 0 6 chr17 68447573 68447886 -21056667 + AluY SINE Alu 1 311 0 257 102 85 0 chr17 68447911 68447970 -21056583 - MER2 DNA MER2_type -139 206 143 914 166 18 12 chr17 68448227 68448396 -21056157 - MER2 DNA MER2_type -134 211 42 2164 194 70 34 chr17 68449004 68449477 -21055076 - MLT1D LTR MaLR -3 502 13 2403 178 47 38 chr17 68449488 68449861 -21054692 - L1M4 LINE L1 -1437 4709 4326 1638 177 24 14 chr17 68449861 68450155 -21054398 + AluJo SINE Alu 1 297 -15 2403 178 47 38 chr17 68450155 68450393 -21054160 - L1M4 LINE L1 -1820 4326 4092 1408 108 0 78 chr17 68450394 68450625 -21053928 - AluSg/x SINE Alu -16 296 84 1011 220 33 26 chr17 68450638 68450911 -21053642 - L1M4 LINE L1 -2063 4083 3809 2283 162 16 5 chr17 68450911 68451349 -21053204 - Looper DNA T2_type -781 777 335 529 229 16 25 chr17 68452018 68452140 -21052413 + FRAM SINE Alu 1 112 -64 2963 102 26 2 chr17 68452431 68452853 -21051700 + MER57B LTR ERV1 1 432 -2 2310 109 0 3 chr17 68453018 68453331 -21051222 - AluSq SINE Alu -1 312 1 22 0 0 0 chr17 68453333 68453355 -21051198 + AT_rich Low_complexity Low_complexity 1 22 0 805 160 0 56 chr17 68453366 68453510 -21051043 - FRAM SINE Alu -32 144 9 3952 219 59 16 chr17 68454151 68455227 -21049326 + L1PA15-16 LINE L1 1852 3065 -3784 1921 182 76 25 chr17 68455227 68455634 -21048919 + MSTA LTR MaLR 1 428 0 3952 219 59 16 chr17 68455634 68455785 -21048768 + L1PA15-16 LINE L1 3065 3208 -3641 1025 123 37 6 chr17 68455790 68455953 -21048600 - MER30 DNA MER1_type -61 169 2 2881 140 38 6 chr17 68455953 68456459 -21048094 + L1PA15 LINE L1 5641 6162 -3 206 245 82 0 chr17 68457646 68457695 -21046858 - L2 LINE L2 0 3313 3261 1869 148 26 10 chr17 68457720 68458062 -21046491 - AluSx SINE Alu 0 349 3 475 310 80 16 chr17 68458125 68458312 -21046241 - L2 LINE L2 0 3313 3115 443 258 23 118 chr17 68458323 68458544 -21046009 - LTR16A1 LTR ERVL -177 280 81 2335 244 78 17 chr17 68458797 68459558 -21044995 - L1ME2 LINE L1 -91 6142 5336 335 141 153 59 chr17 68459558 68459643 -21044910 - Tigger7 DNA MER2_type 0 2587 2495 1394 189 64 0 chr17 68459652 68459901 -21044652 - Tigger7 DNA MER2_type -2222 265 1 425 244 97 11 chr17 68459901 68460077 -21044476 - L1ME2 LINE L1 -878 5337 5147 186 103 0 0 chr17 68460809 68460838 -21043715 + (A)n Simple_repeat Simple_repeat 1 29 0 1135 231 82 74 chr17 68461297 68461881 -21042672 - L1ME2 LINE L1 -1107 5108 4520 * 2647 235 97 48 chr17 68461879 68462113 -21042440 - L1ME2 LINE L1 -2398 3817 3596 450 0 0 0 chr17 68462113 68462163 -21042390 + (TG)n Simple_repeat Simple_repeat 1 50 0 2647 235 97 48 chr17 68462163 68463160 -21041393 - L1ME2 LINE L1 -2619 3596 2504 1738 178 0 11 chr17 68463160 68463447 -21041106 + AluJo SINE Alu 1 284 -28 2647 235 97 48 chr17 68463447 68463642 -21040911 - L1ME2 LINE L1 -3711 2504 2320 361 281 196 34 chr17 68463656 68464669 -21039884 - L1ME2 LINE L1 -4135 2261 1085 609 318 39 25 chr17 68464669 68464955 -21039598 - L2 LINE L2 -1506 1808 1519 1324 140 39 19 chr17 68465494 68465751 -21038802 - L1MA1 LINE L1 0 6302 6041 394 187 43 36 chr17 68466437 68466576 -21037977 - L1MCa LINE L1 -3166 3260 3121 2780 246 69 35 chr17 68466623 68467431 -21037122 - MER21B LTR ERV1 -15 848 13 1273 295 80 13 chr17 68467478 68468075 -21036478 - L1MCa LINE L1 -3313 3113 2477 312 292 72 72 chr17 68468115 68468234 -21036319 - L1MCa LINE L1 -4068 2358 2297 1869 169 0 13 chr17 68468234 68468535 -21036018 - AluJb SINE Alu -13 299 3 312 292 72 72 chr17 68468535 68468704 -21035849 - L1MCa LINE L1 -4129 2297 2130 1535 210 10 19 chr17 68468861 68469171 -21035382 - AluJo SINE Alu -5 307 1 281 70 0 0 chr17 68469225 68469268 -21035285 - L1MCa LINE L1 -4728 1879 1837 814 234 0 6 chr17 68469272 68469443 -21035110 - FAM SINE Alu -5 44 1 250 271 58 39 chr17 68469475 68469630 -21034923 - HAL1 LINE L1 -911 1596 1439 2116 146 0 3 chr17 68469695 68470004 -21034549 + AluSx SINE Alu 1 308 -4 243 283 74 49 chr17 68470015 68470259 -21034294 - L1MCa LINE L1 -4862 1554 1305 * 2550 201 47 8 chr17 68470234 68470867 -21033686 - L1M4 LINE L1 -4663 1912 840 206 305 113 0 chr17 68521126 68521267 -20983286 - L2 LINE L2 -954 2360 2204 372 285 81 35 chr17 68521279 68521451 -20983102 - L1ME1 LINE L1 -25 6141 5962 6858 110 21 11 chr17 68521451 68522852 -20981701 + Tigger1 DNA MER2_type 945 2418 0 2752 219 81 14 chr17 68522869 68524259 -20980294 - L1ME1 LINE L1 -280 5886 4398 1446 164 27 41 chr17 68524274 68524638 -20979915 - Tigger7 DNA MER2_type 0 2487 196 1245 164 64 5 chr17 68524637 68524857 -20979696 - Tigger7 DNA MER2_type -492 241 9 * 2173 111 3 0 chr17 68524930 68525227 -20979326 + AluSx SINE Alu 1 298 -14 2714 238 34 33 chr17 68525237 68526141 -20978412 - L1ME1 LINE L1 -1823 4323 3419 315 317 14 49 chr17 68526172 68526314 -20978239 + MIR3 SINE MIR 58 194 -14 261 328 43 43 chr17 68530591 68530707 -20973846 + L2 LINE L2 3139 3254 -18 275 274 0 0 chr17 68530747 68530820 -20973733 + (CATA)n Simple_repeat Simple_repeat 4 76 0 628 240 47 27 chr17 68530826 68530976 -20973577 - MIR SINE MIR -70 192 40 617 264 72 84 chr17 68531842 68532366 -20972187 - L1MC/D LINE L1 -743 5403 5303 1375 206 72 19 chr17 68532366 68532687 -20971866 + MER58B DNA MER1_type 4 341 0 617 264 72 84 chr17 68532687 68533179 -20971374 - L1MC/D LINE L1 -843 5303 4806 29 0 0 0 chr17 68533190 68533219 -20971334 + AT_rich Low_complexity Low_complexity 1 29 0 741 178 0 8 chr17 68533220 68533338 -20971215 - FLAM_A SINE Alu -16 117 1 1272 93 0 0 chr17 68533562 68533723 -20970830 - AluSg/x SINE Alu -16 296 136 2230 78 44 0 chr17 68533724 68534018 -20970535 - AluSq SINE Alu -6 307 1 354 258 65 54 chr17 68534779 68535039 -20969514 - L2 LINE L2 -770 2544 2282 1164 211 39 91 chr17 68535110 68535660 -20968893 - MER39 LTR ERV1 0 707 1 1281 153 0 0 chr17 68535839 68536055 -20968498 - L1P LINE L1 -1131 5015 4800 1865 128 3 13 chr17 68536055 68536358 -20968195 + L1PA13 LINE L1 5852 6154 -9 3640 256 89 20 chr17 68536536 68537468 -20967085 - L2 LINE L2 0 3313 2245 1482 166 45 60 chr17 68537468 68537782 -20966771 + AluJb SINE Alu 1 309 -3 3640 256 89 20 chr17 68537782 68538288 -20966265 - L2 LINE L2 -1068 2245 1775 297 333 42 82 chr17 68538398 68538750 -20965803 + L2 LINE L2 2633 2969 -303 240 79 0 0 chr17 68538970 68539007 -20965546 + Tigger7 DNA MER2_type 2354 2390 -101 1828 173 14 48 chr17 68539007 68539378 -20965175 + MER47A DNA MER2_type 2 359 -7 407 308 88 19 chr17 68539563 68539771 -20964782 - MIR SINE MIR -14 248 26 286 156 0 0 chr17 68539979 68540024 -20964529 - MER58 DNA MER1_type -1 2419 2375 1030 226 83 0 chr17 68540166 68540418 -20964135 - MER58 DNA MER1_type -68 273 1 270 306 104 31 chr17 68540418 68540609 -20963944 - MLT1L LTR MaLR -54 561 357 1525 263 184 38 chr17 68540661 68541400 -20963153 + L2 LINE L2 1818 2664 -650 468 308 112 0 chr17 68541425 68541594 -20962959 + MIR SINE MIR 20 207 -55 2178 97 0 36 chr17 68541771 68542079 -20962474 - AluSc SINE Alu -12 297 1 27 29 0 0 chr17 68542743 68542777 -20961776 + AT_rich Low_complexity Low_complexity 1 34 0 1362 179 57 47 chr17 68543261 68543389 -20961164 + AluJb SINE Alu 1 126 -186 306 0 0 0 chr17 68543389 68543423 -20961130 + (TA)n Simple_repeat Simple_repeat 2 35 0 1362 179 57 47 chr17 68543423 68543590 -20960963 + AluJb SINE Alu 126 299 -13 24 0 0 0 chr17 68543618 68543642 -20960911 + AT_rich Low_complexity Low_complexity 1 24 0 1685 170 14 17 chr17 68543795 68544089 -20960464 + AluJo SINE Alu 2 294 -18 732 163 0 64 chr17 68544383 68544524 -20960029 - FLAM_A SINE Alu 0 133 2 5314 123 17 26 chr17 68544816 68546518 -20958035 - L1PA13 LINE L1 0 6163 4474 22 35 0 0 chr17 68546518 68546547 -20958006 + AT_rich Low_complexity Low_complexity 1 29 0 296 286 67 0 chr17 68546565 68546670 -20957883 - L1MC5 LINE L1 -516 7445 7334 * 918 266 94 21 chr17 68546656 68547080 -20957473 - L1MC5 LINE L1 -539 7422 6968 896 293 116 26 chr17 68547126 68547505 -20957048 - L1MC4a LINE L1 -917 6891 6479 2235 92 3 0 chr17 68547737 68548029 -20956524 + AluSq SINE Alu 1 293 -20 361 310 147 16 chr17 68548039 68548297 -20956256 - HAL1b LINE L1 -613 735 444 512 187 8 65 chr17 68548336 68548459 -20956094 + FLAM_A SINE Alu 12 127 -15 2402 89 0 0 chr17 68548483 68548796 -20955757 + AluSq SINE Alu 1 313 0 239 237 11 0 chr17 68548961 68549054 -20955499 + (TA)n Simple_repeat Simple_repeat 2 95 0 339 296 64 16 chr17 68549093 68549218 -20955335 - HAL1b LINE L1 -1157 191 61 3019 216 99 14 chr17 68550185 68550930 -20953623 - MER21B LTR ERV1 -28 835 22 396 0 0 0 chr17 68550930 68550974 -20953579 + (TG)n Simple_repeat Simple_repeat 2 45 0 3019 216 99 14 chr17 68550974 68550998 -20953555 - MER21B LTR ERV1 -841 22 1 225 0 0 0 chr17 68551073 68551098 -20953455 + (TG)n Simple_repeat Simple_repeat 2 26 0 1643 185 6 19 chr17 68551571 68551884 -20952669 + AluJo SINE Alu 1 309 -3 5095 155 31 30 chr17 68552144 68553284 -20951269 - L1MA9 LINE L1 -12 6300 5163 704 92 0 149 chr17 68553285 68553426 -20951127 - AluJb SINE Alu -8 304 185 562 239 95 61 chr17 68553445 68553855 -20950698 - L1M3e LINE L1 -5310 1720 1297 592 140 22 164 chr17 68554544 68554740 -20949813 + L1ME LINE L1 1062 1227 -5310 37 0 0 0 chr17 68554875 68554912 -20949641 + AT_rich Low_complexity Low_complexity 1 37 0 2112 229 57 27 chr17 68554929 68555559 -20948994 + L1ME LINE L1 1193 1841 -4699 532 285 103 50 chr17 68555552 68556008 -20948545 + L1ME LINE L1 5719 6198 -358 * 27 81 0 0 chr17 68556546 68556608 -20947945 + AT_rich Low_complexity Low_complexity 1 62 0 808 212 127 5 chr17 68556639 68556828 -20947725 - MER20 DNA MER1_type -5 214 3 439 264 153 21 chr17 68556844 68557020 -20947533 - MIR SINE MIR -50 212 14 908 216 21 0 chr17 68557990 68558180 -20946373 + MER58 DNA MER1_type 21 214 -127 646 244 6 49 chr17 68558690 68558854 -20945699 - FRAM SINE Alu -9 157 1 254 317 232 6 chr17 68559303 68559467 -20945086 + MIR SINE MIR 36 236 -26 561 198 136 34 chr17 68561994 68562171 -20942382 + L2 LINE L2 3117 3311 -2 1790 107 53 29 chr17 68562936 68563217 -20941336 - AluSx SINE Alu -24 288 1 3063 277 139 32 chr17 68563403 68564866 -20939687 + HAL1 LINE L1 203 1822 -685 644 260 67 5 chr17 68564870 68565093 -20939460 + HAL1 LINE L1 1851 2087 -420 1046 245 20 37 chr17 68565279 68565630 -20938923 - L1M4 LINE L1 -2368 3778 3434 2709 238 55 1 chr17 68565635 68566432 -20938121 - L1M4 LINE L1 -2812 3334 2495 192 176 66 99 chr17 68567443 68567534 -20937019 + L2 LINE L2 3137 3224 -89 212 205 167 26 chr17 68568254 68568332 -20936221 - MIR SINE MIR -30 232 144 23 0 0 0 chr17 68568338 68568361 -20936192 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr17 68568567 68568604 -20935949 + AT_rich Low_complexity Low_complexity 1 37 0 2311 63 0 23 chr17 68569281 68569580 -20934973 + AluY SINE Alu 1 292 -19 416 260 33 13 chr17 68569843 68569993 -20934560 + L1MEd LINE L1 12 164 -5955 1505 247 104 39 chr17 68570072 68570611 -20933942 - ERVL LTR ERVL -1499 4265 3692 358 320 66 28 chr17 68570886 68571067 -20933486 - L1MDa LINE L1 -6210 330 143 5129 243 28 16 chr17 68571092 68572611 -20931942 - L1MCb LINE L1 -2203 4223 2688 5851 138 158 34 chr17 68572617 68574049 -20930504 - L1MCb LINE L1 -3906 2520 911 260 231 0 0 chr17 68574083 68574135 -20930418 + LTR30 LTR ERV1 1 52 -670 1333 114 116 15 chr17 68574148 68574385 -20930168 + LTR12 LTR ERV1 55 2032 -406 284 245 75 0 chr17 68574385 68574479 -20930074 + LTR30 LTR ERV1 552 652 -70 456 121 181 0 chr17 68574479 68574562 -20929991 + LTR12 LTR ERV1 484 581 -133 3430 199 76 43 chr17 68574568 68575406 -20929147 - L1MCb LINE L1 -5538 888 23 297 229 36 36 chr17 68575416 68575499 -20929054 - L1MDa LINE L1 -5982 548 21 256 315 32 0 chr17 68576833 68576958 -20927595 - L2 LINE L2 -421 2893 2766 23 0 0 0 chr17 68577012 68577035 -20927518 + AT_rich Low_complexity Low_complexity 1 23 0 3143 219 64 43 chr17 68577345 68577614 -20926939 - L1ME1 LINE L1 -17 6149 5887 8529 43 0 3 chr17 68577614 68579434 -20925119 - L1PA5 LINE L1 -3 6151 4330 3143 219 64 43 chr17 68579434 68579867 -20924686 - L1ME1 LINE L1 -279 5887 5465 2153 144 77 17 chr17 68579867 68580271 -20924282 - MSTA LTR MaLR 0 428 1 3143 219 64 43 chr17 68580271 68581178 -20923375 - L1ME1 LINE L1 -701 5465 4493 753 191 0 22 chr17 68581178 68581314 -20923239 - FLAM_A SINE Alu 0 133 1 3143 219 64 43 chr17 68581314 68581604 -20922949 - L1ME1 LINE L1 -1673 4493 4211 295 238 36 0 chr17 68581841 68581925 -20922628 - L1ME3A LINE L1 -4 6166 6080 1663 185 17 17 chr17 68582567 68582869 -20921684 - AluJo SINE Alu -10 302 1 313 330 55 0 chr17 68583557 68583666 -20920887 + HAL1 LINE L1 1162 1276 -1231 2675 162 55 86 chr17 68583854 68584437 -20920116 - L1MB4 LINE L1 -228 5952 5352 1807 185 0 19 chr17 68584437 68584745 -20919808 - AluJb SINE Alu -10 302 1 2675 162 55 86 chr17 68584745 68584810 -20919743 - L1MB4 LINE L1 -828 5352 5287 333 61 0 20 chr17 68584810 68584859 -20919694 - MADE1 DNA Mariner -32 48 1 1284 97 83 23 chr17 68584864 68585081 -20919472 + MER30 DNA MER1_type 1 230 0 2675 162 55 86 chr17 68585081 68585253 -20919300 - L1MB4 LINE L1 -897 5283 5089 371 327 113 16 chr17 68585257 68585684 -20918869 - L1MEd LINE L1 -5053 1066 547 465 19 0 0 chr17 68585830 68585884 -20918669 + (CA)n Simple_repeat Simple_repeat 2 55 0 234 0 0 0 chr17 68585883 68585909 -20918644 + (TC)n Simple_repeat Simple_repeat 2 27 0 * 240 100 0 0 chr17 68585914 68585954 -20918599 + (TA)n Simple_repeat Simple_repeat 1 40 0 27 49 0 0 chr17 68587171 68587212 -20917341 + AT_rich Low_complexity Low_complexity 1 41 0 1218 303 44 27 chr17 68588942 68589418 -20915135 - L2 LINE L2 0 3313 2830 1445 179 9 50 chr17 68589421 68589739 -20914814 + AluJo SINE Alu 5 309 -3 226 250 0 0 chr17 68589813 68589869 -20914684 + T-rich Low_complexity Low_complexity 1 56 0 1243 73 0 0 chr17 68589870 68590035 -20914518 - L1PA5 LINE L1 0 6154 5990 275 221 63 63 chr17 68590039 68590134 -20914419 + L1PA5 LINE L1 5952 6046 -108 1467 166 113 3 chr17 68590213 68590497 -20914056 - MER2 DNA MER2_type -25 320 6 324 195 12 37 chr17 68590924 68591006 -20913547 + MIR SINE MIR 99 178 -84 269 186 47 155 chr17 68591268 68591397 -20913156 - MIR SINE MIR -114 148 34 180 369 77 0 chr17 68591404 68591469 -20913084 - MIR SINE MIR -118 144 75 496 291 58 14 chr17 68591815 68592038 -20912515 + L1MC/D LINE L1 5526 5758 -2050 804 271 10 15 chr17 68592227 68592426 -20912127 + MIR SINE MIR 65 262 0 1481 166 140 34 chr17 68593713 68594062 -20910491 - MER31B LTR ERV1 -80 386 1 2173 167 50 24 chr17 68594885 68595346 -20909207 + L1MB8 LINE L1 5647 6119 -59 894 62 78 0 chr17 68595436 68595564 -20908989 + MER85 DNA T2_type 1 138 -1 827 159 49 0 chr17 68595652 68595815 -20908738 + L1MA4 LINE L1 6118 6288 -12 2219 111 3 0 chr17 68595928 68596234 -20908319 + AluSc SINE Alu 1 307 -2 23 54 0 0 chr17 68596364 68596401 -20908152 + AT_rich Low_complexity Low_complexity 1 37 0 286 304 22 0 chr17 68597021 68597113 -20907440 - MIR SINE MIR -10 252 159 * 686 351 30 11 chr17 68597089 68597354 -20907199 - L3 LINE CR1 -78 1499 1230 237 338 23 15 chr17 68597363 68597496 -20907057 - L3 LINE CR1 -1111 466 333 932 218 53 115 chr17 68597803 68598202 -20906351 - MLT1A2 LTR MaLR 0 374 1 462 284 62 19 chr17 68598263 68598425 -20906128 + MIR SINE MIR 27 195 -67 1708 131 63 11 chr17 68598429 68598697 -20905856 + AluSx SINE Alu 1 282 -30 2457 79 0 0 chr17 68599117 68599422 -20905131 - AluSc SINE Alu -4 305 1 230 261 43 14 chr17 68599996 68600065 -20904488 + MIR SINE MIR 84 154 -108 1854 160 3 10 chr17 68600912 68601206 -20903347 - AluJo SINE Alu -20 292 1 239 309 80 19 chr17 68603138 68603300 -20901253 - MIR SINE MIR -46 216 45 1382 170 53 53 chr17 68606034 68606175 -20898378 - AluJb SINE Alu -28 284 144 2404 66 3 13 chr17 68606175 68606480 -20898073 - AluY SINE Alu -9 302 1 1382 170 53 53 chr17 68606480 68606620 -20897933 - AluJb SINE Alu -167 145 3 23 33 0 0 chr17 68606983 68607013 -20897540 + AT_rich Low_complexity Low_complexity 1 30 0 1654 144 0 108 chr17 68607131 68607465 -20897088 + AluJb SINE Alu 1 298 -14 1919 162 10 3 chr17 68607932 68608240 -20896313 + AluJb SINE Alu 1 310 -2 324 335 106 6 chr17 68608645 68608806 -20895747 + MIR SINE MIR 66 242 -20 23 0 0 0 chr17 68609016 68609039 -20895514 + AT_rich Low_complexity Low_complexity 1 23 0 1026 135 0 47 chr17 68609195 68609365 -20895188 + AluJo SINE Alu 121 282 -30 363 173 53 0 chr17 68609588 68609663 -20894890 - MER103 DNA DNA -71 95 17 2058 134 20 3 chr17 68609853 68610151 -20894402 + AluSx SINE Alu 1 303 -9 2247 99 0 7 chr17 68610674 68610976 -20893577 + AluY SINE Alu 1 300 -11 2083 98 6 54 chr17 68611082 68611399 -20893154 - AluSg1 SINE Alu -7 302 1 2080 148 21 3 chr17 68612051 68612382 -20892171 + MER1B DNA MER1_type 1 337 0 828 209 96 0 chr17 68612532 68612719 -20891834 + MIR SINE MIR 52 256 -6 953 157 101 28 chr17 68613314 68613531 -20891022 + MIR SINE MIR 30 262 0 490 298 0 0 chr17 68613565 68613669 -20890884 + L2 LINE L2 3169 3272 0 1996 122 11 7 chr17 68613820 68614107 -20890446 - AluSx SINE Alu -24 288 1 1273 116 48 0 chr17 68615585 68615792 -20888761 + L1MA3 LINE L1 6089 6305 0 1200 158 112 36 chr17 68616416 68616694 -20887859 - AluJo SINE Alu -12 300 2 627 325 31 5 chr17 68616702 68616896 -20887657 + MIR SINE MIR 29 227 -35 913 92 0 69 chr17 68616897 68617028 -20887525 + AluSx SINE Alu 64 185 -127 2156 113 3 10 chr17 68617626 68617926 -20886627 + AluSx SINE Alu 1 298 -14 775 197 63 0 chr17 68619078 68619220 -20885333 - MER5A DNA MER1_type -31 158 8 2210 113 0 0 chr17 68620368 68620670 -20883883 - AluSg SINE Alu -8 302 1 1097 68 0 0 chr17 68620670 68620803 -20883750 - AluSg SINE Alu -177 133 1 224 259 111 28 chr17 68621718 68621826 -20882727 - MIR SINE MIR 0 262 146 186 362 14 0 chr17 68622062 68622131 -20882422 - MIR SINE MIR -109 153 84 1739 144 40 0 chr17 68622352 68622630 -20881923 + AluJo SINE Alu 12 300 -12 21 0 0 0 chr17 68622948 68622969 -20881584 + AT_rich Low_complexity Low_complexity 1 21 0 440 218 50 30 chr17 68623900 68624001 -20880552 - L2 LINE L2 -1 3312 3210 545 293 129 69 chr17 68624113 68624680 -20879873 + L1MEc LINE L1 120 720 -5676 262 292 0 14 chr17 68625089 68625161 -20879392 - L2 LINE L2 -4 3309 3239 509 278 56 63 chr17 68625333 68625730 -20878823 + MLT1J2 LTR MaLR 1 442 -8 1382 176 90 8 chr17 68626743 68626998 -20877555 + AluSq SINE Alu 1 276 -37 1803 161 14 7 chr17 68627024 68627316 -20877237 + AluJo SINE Alu 3 296 -16 376 231 60 25 chr17 68627332 68627531 -20877022 + MER113 DNA MER1_type? 1 206 -315 412 185 219 8 chr17 68627559 68627678 -20876875 + MER113 DNA MER1_type? 276 419 -102 283 300 0 11 chr17 68627690 68627780 -20876773 - MLT1I LTR MaLR -3 406 318 282 277 101 17 chr17 68627919 68628038 -20876515 - MLT1J2 LTR MaLR -302 148 20 260 323 43 0 chr17 68628053 68628146 -20876407 + MER113 DNA MER1_type? 422 518 -3 1919 134 7 10 chr17 68628147 68628445 -20876108 - AluSq SINE Alu -13 300 4 299 360 109 0 chr17 68628480 68628627 -20875926 + MIR SINE MIR 32 194 -68 1901 122 3 78 chr17 68628658 68628979 -20875574 + AluSx SINE Alu 1 297 -15 1140 293 17 19 chr17 68629533 68630062 -20874491 - L1M4 LINE L1 -2530 3616 3089 864 168 0 0 chr17 68631270 68631401 -20873152 + FLAM_C SINE Alu 2 132 -1 226 246 0 0 chr17 68632244 68632301 -20872252 + T-rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr17 68632441 68632462 -20872091 + AT_rich Low_complexity Low_complexity 1 21 0 3638 198 44 21 chr17 68632904 68633798 -20870755 - L1 LINE L1 -1086 5060 4147 219 271 14 0 chr17 68633920 68633990 -20870563 + T-rich Low_complexity Low_complexity 4 74 0 258 32 0 0 chr17 68634372 68634403 -20870150 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1700 156 0 58 chr17 68634447 68634775 -20869778 + AluJb SINE Alu 1 309 -3 891 185 16 11 chr17 68634903 68635087 -20869466 - MER5A DNA MER1_type 0 189 5 483 298 145 26 chr17 68635356 68635584 -20868969 - MIR SINE MIR 0 262 8 373 293 131 35 chr17 68635717 68635938 -20868615 - MIR SINE MIR -26 236 1 184 179 18 89 chr17 68637649 68637705 -20866848 - L2 LINE L2 -12 3301 3250 348 232 0 0 chr17 68638557 68638656 -20865897 + CT-rich Low_complexity Low_complexity 2 100 0 887 196 50 11 chr17 68640852 68641031 -20863522 - MER5A DNA MER1_type 0 189 4 273 237 34 0 chr17 68641608 68641667 -20862886 - MIR SINE MIR -67 141 81 613 176 207 12 chr17 68641910 68642079 -20862474 + MIR SINE MIR 54 256 -6 261 193 0 0 chr17 68642439 68642496 -20862057 + L1ME4a LINE L1 5996 6052 -69 309 312 126 55 chr17 68642499 68642698 -20861855 + MIR SINE MIR 2 214 -48 1267 161 18 27 chr17 68644167 68644391 -20860162 - AluJo SINE Alu -86 226 5 1742 152 0 7 chr17 68644422 68644699 -20859854 - LTR48B LTR ERV1 -369 275 1 784 224 11 34 chr17 68644916 68645095 -20859458 + MIR SINE MIR 32 206 -56 202 107 0 89 chr17 68645095 68645151 -20859402 + (TAAAAA)n Simple_repeat Simple_repeat 6 56 0 778 215 6 0 chr17 68645153 68645311 -20859242 - AluJb SINE Alu -17 295 137 680 278 49 25 chr17 68645508 68645753 -20858800 + MIR SINE MIR 2 252 -10 2059 233 63 39 chr17 68646088 68646646 -20857907 - MLT1E LTR MaLR 0 593 23 292 250 24 0 chr17 68646825 68646909 -20857644 - L1ME4a LINE L1 -69 6052 5967 1224 204 93 28 chr17 68646914 68647237 -20857316 - MER2 DNA MER2_type 0 344 1 1466 179 45 92 chr17 68647248 68647629 -20856924 - MLT1A2 LTR MaLR -8 366 4 784 189 0 0 chr17 68647658 68647790 -20856763 + AluJo SINE Alu 3 134 -178 511 297 120 30 chr17 68647794 68648201 -20856352 - L1ME4a LINE L1 -193 5928 5485 1332 164 0 5 chr17 68648560 68648773 -20855780 + AluSg/x SINE Alu 84 295 -17 916 314 51 3 chr17 68648836 68649151 -20855402 + L2 LINE L2 1904 2233 -1081 246 244 61 24 chr17 68649274 68649356 -20855197 + L2 LINE L2 2994 3078 -235 * 3862 274 99 19 chr17 68649324 68649421 -20855132 - L2 LINE L2 -1374 1940 1852 1853 154 13 7 chr17 68649421 68649719 -20854834 + AluJo SINE Alu 1 300 -12 3862 274 99 19 chr17 68649719 68650949 -20853604 - L2 LINE L2 -1462 1852 507 251 358 42 33 chr17 68651036 68651156 -20853397 - L2 LINE L2 -4 3268 3148 987 178 0 24 chr17 68651528 68651697 -20852856 - FRAM SINE Alu -1 165 1 2874 166 46 8 chr17 68651886 68652385 -20852168 - MLT2B1 LTR ERVL 0 520 3 1811 129 34 17 chr17 68652398 68652692 -20851861 + AluJo SINE Alu 1 299 -13 210 37 0 0 chr17 68653708 68653735 -20850818 + (GA)n Simple_repeat Simple_repeat 2 28 0 602 224 103 0 chr17 68654559 68654715 -20849838 + MIR SINE MIR 79 250 -12 22 35 0 0 chr17 68654715 68654744 -20849809 + AT_rich Low_complexity Low_complexity 1 29 0 1268 119 0 0 chr17 68655137 68655313 -20849240 + AluSg/x SINE Alu 137 312 0 713 206 0 23 chr17 68655484 68655615 -20848938 + FLAM_C SINE Alu 1 128 -15 2018 110 40 0 chr17 68656943 68657236 -20847317 + AluSc SINE Alu 1 304 0 2064 77 42 38 chr17 68657251 68657538 -20847015 + AluY SINE Alu 4 291 -20 2297 79 3 32 chr17 68657544 68657859 -20846694 + AluY SINE Alu 1 306 -5 2390 84 10 0 chr17 68658472 68658781 -20845772 - AluSx SINE Alu 0 312 1 2146 99 40 7 chr17 68659578 68659880 -20844673 - AluSq SINE Alu -1 312 1 298 268 56 0 chr17 68660024 68660095 -20844458 + L2 LINE L2 3197 3271 -1 2442 205 107 0 chr17 68660637 68661134 -20843419 + MER89 LTR ERV1 1 550 -9 23 0 0 0 chr17 68661203 68661226 -20843327 + AT_rich Low_complexity Low_complexity 1 23 0 1036 228 111 8 chr17 68662194 68662563 -20841990 + L1ME1 LINE L1 4304 4710 -1436 2683 219 69 66 chr17 68662639 68662688 -20841865 + L1ME1 LINE L1 4946 4993 -1173 1553 169 0 26 chr17 68662688 68662954 -20841599 + AluJo SINE Alu 46 304 -8 2683 219 69 66 chr17 68662954 68663922 -20840631 + L1ME1 LINE L1 4993 5967 -199 2498 68 0 3 chr17 68663922 68664233 -20840320 + AluY SINE Alu 1 310 -1 2683 219 69 66 chr17 68664233 68664379 -20840174 + L1ME1 LINE L1 5967 6111 -55 2301 113 0 3 chr17 68664380 68664689 -20839864 + AluSx SINE Alu 1 308 -4 2434 53 0 7 chr17 68665448 68665749 -20838804 + AluY SINE Alu 1 299 -12 204 318 32 32 chr17 68666544 68666607 -20837946 + L2 LINE L2 3137 3199 -73 646 262 187 19 chr17 68666704 68666918 -20837635 + MIR SINE MIR 13 262 0 21 0 0 0 chr17 68666983 68667004 -20837549 + AT_rich Low_complexity Low_complexity 1 21 0 1351 164 87 31 chr17 68667266 68667552 -20837001 + AluJo SINE Alu 1 302 -10 190 371 67 30 chr17 68667599 68667866 -20836687 - L2 LINE L2 -1573 1741 1465 309 222 148 12 chr17 68668060 68668141 -20836412 - L2 LINE L2 -1 3312 3221 2292 107 3 0 chr17 68668141 68668450 -20836103 + AluSx SINE Alu 1 310 -2 640 206 0 29 chr17 68670928 68671064 -20833489 + L1PB4 LINE L1 6016 6147 -9 2503 44 7 0 chr17 68671134 68671430 -20833123 + AluY SINE Alu 1 298 -13 600 261 0 54 chr17 68671884 68672051 -20832502 - L1ME3 LINE L1 -98 6064 5908 1972 90 90 11 chr17 68672051 68672330 -20832223 - AluSx SINE Alu -11 301 1 600 261 0 54 chr17 68672330 68672365 -20832188 - L1ME3 LINE L1 -254 5908 5873 868 211 0 0 chr17 68672410 68672557 -20831996 - FRAM SINE Alu -19 147 1 1277 133 0 11 chr17 68672611 68672791 -20831762 - AluSx SINE Alu -134 178 1 910 195 104 98 chr17 68672791 68673263 -20831290 - L1ME3 LINE L1 -407 5755 5281 550 308 69 27 chr17 68673266 68673749 -20830804 - L1ME3 LINE L1 -924 5222 4696 2297 79 3 13 chr17 68673749 68674052 -20830501 - AluSq SINE Alu -11 302 3 550 308 69 27 chr17 68674052 68674114 -20830439 - L1ME3 LINE L1 -1450 4696 4638 885 232 79 13 chr17 68674579 68674811 -20829742 + MIR SINE MIR 1 228 -34 195 246 0 0 chr17 68674950 68675007 -20829546 + (TA)n Simple_repeat Simple_repeat 1 57 0 667 264 43 97 chr17 68675021 68675514 -20829039 + L1MEc LINE L1 1313 1778 -4618 513 207 0 83 chr17 68675570 68675715 -20828838 + FLAM_A SINE Alu 1 133 -9 2079 88 46 3 chr17 68675718 68676002 -20828551 + AluSc SINE Alu 1 296 -13 521 219 58 0 chr17 68676002 68676139 -20828414 + L1MD3 LINE L1 7792 7936 -59 4275 177 41 40 chr17 68676162 68677461 -20827092 - L1MB7 LINE L1 -7 6177 4870 1935 150 0 17 chr17 68677461 68677754 -20826799 + AluJo SINE Alu 11 298 -14 4275 177 41 40 chr17 68677754 68678110 -20826443 - L1MB7 LINE L1 -1314 4870 4516 516 55 0 121 chr17 68678686 68678777 -20825776 + MADE1 DNA Mariner 1 80 0 2108 124 0 0 chr17 68678870 68679161 -20825392 - AluJb SINE Alu -21 291 1 23 0 0 0 chr17 68679188 68679211 -20825342 + AT_rich Low_complexity Low_complexity 1 23 0 182 259 74 0 chr17 68679647 68679701 -20824852 + L3 LINE CR1 836 893 -684 887 252 31 40 chr17 68679976 68680202 -20824351 + MIR SINE MIR 18 241 -21 568 239 120 11 chr17 68681774 68681958 -20822595 + L1MEc LINE L1 2709 2912 -3303 775 215 44 4 chr17 68681975 68682203 -20822350 - L1MB7 LINE L1 -3083 3063 2827 25 51 0 0 chr17 68682380 68682419 -20822134 + AT_rich Low_complexity Low_complexity 1 39 0 1645 227 86 124 chr17 68682534 68683605 -20820948 + L2 LINE L2 2170 3216 -97 439 345 7 14 chr17 68684016 68684158 -20820395 + MIR3 SINE MIR 4 144 -64 * 592 332 144 0 chr17 68684150 68684379 -20820174 - MIR SINE MIR 0 262 1 251 211 28 127 chr17 68684532 68684674 -20819879 + MIR SINE MIR 79 206 -56 2090 142 3 3 chr17 68685584 68685894 -20818659 - AluSx SINE Alu -2 310 1 204 231 0 0 chr17 68686034 68686073 -20818480 - MER5A DNA MER1_type -83 106 68 1953 147 14 0 chr17 68686739 68687031 -20817522 + AluSx SINE Alu 1 296 -16 2398 103 3 0 chr17 68687472 68687783 -20816770 + AluSq SINE Alu 1 312 -1 514 280 6 57 chr17 68690429 68690586 -20813967 - L1M2 LINE L1 -504 5658 5513 987 236 96 17 chr17 68690610 68690903 -20813650 + MER46C DNA MER2_type 23 338 0 275 280 78 0 chr17 68690903 68691048 -20813505 - L1ME LINE L1 -679 5491 5330 4911 159 47 101 chr17 68691518 68691882 -20812671 + L1MB4 LINE L1 4272 4654 -1526 750 189 8 0 chr17 68691882 68692014 -20812539 + FLAM_A SINE Alu 1 133 0 4911 159 47 101 chr17 68692014 68692201 -20812352 + L1MB4 LINE L1 4654 4850 -1330 2146 133 0 0 chr17 68692201 68692510 -20812043 + AluSx SINE Alu 1 309 -3 4911 159 47 101 chr17 68692510 68693021 -20811532 + L1MB4 LINE L1 4850 5387 -793 1744 137 33 42 chr17 68693021 68693327 -20811226 + AluSx SINE Alu 1 303 -9 4911 159 47 101 chr17 68693327 68694301 -20810252 + L1MB4 LINE L1 5387 6178 -2 1462 266 67 19 chr17 68694555 68694602 -20809951 - L1ME3 LINE L1 -222 5940 5897 2534 74 0 0 chr17 68694602 68694913 -20809640 - AluY SINE Alu 0 311 1 1462 266 67 19 chr17 68694913 68695505 -20809048 - L1ME3 LINE L1 -265 5897 5270 1738 268 68 57 chr17 68695740 68696404 -20808149 - L1ME3 LINE L1 -1310 4836 4181 1849 130 13 39 chr17 68696404 68696711 -20807842 - AluJo SINE Alu -13 299 1 1738 268 68 57 chr17 68696711 68696817 -20807736 - L1ME3 LINE L1 -1965 4181 4078 2055 114 0 4 chr17 68696817 68697129 -20807424 - AluSg SINE Alu 0 313 3 1738 268 68 57 chr17 68697129 68697554 -20806999 - L1ME3 LINE L1 -2068 4078 3625 252 266 122 68 chr17 68698073 68698336 -20806217 - L1ME3 LINE L1 -2530 3616 3340 220 295 85 103 chr17 68698596 68698820 -20805733 + L2 LINE L2 2684 2903 -411 327 323 87 16 chr17 68699084 68699211 -20805342 + L2 LINE L2 3136 3271 -1 2349 49 0 0 chr17 68699278 68699563 -20804990 - L1PA6 LINE L1 0 6154 5870 855 145 0 8 chr17 68699999 68700130 -20804423 - FLAM_C SINE Alu -3 130 1 1582 213 60 9 chr17 68701843 68702190 -20802363 - MLT1A1 LTR MaLR 0 365 1 502 244 240 0 chr17 68702474 68702724 -20801829 + L1ME1 LINE L1 2349 2658 -3488 2926 221 77 33 chr17 68702725 68703097 -20801456 + MER21B LTR ERV1 1 355 -508 379 76 0 30 chr17 68703097 68703163 -20801390 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2257 81 0 7 chr17 68703165 68703449 -20801104 - AluY SINE Alu -29 282 1 2202 115 0 0 chr17 68703451 68703747 -20800806 - AluSx SINE Alu -16 296 1 2926 221 77 33 chr17 68703747 68704146 -20800407 + MER21B LTR ERV1 355 812 -51 4715 233 75 55 chr17 68704162 68705406 -20799147 + L1ME1 LINE L1 2660 3877 -2269 1536 158 71 4 chr17 68705406 68705660 -20798893 + AluJo SINE Alu 6 276 -36 4715 233 75 55 chr17 68705660 68706012 -20798541 + L1ME1 LINE L1 3877 4220 -1926 2072 131 7 0 chr17 68706012 68706309 -20798244 + AluSq SINE Alu 1 299 -14 4715 233 75 55 chr17 68706309 68706592 -20797961 + L1ME1 LINE L1 4220 4578 -1568 460 223 43 0 chr17 68706594 68706688 -20797865 + MER58 DNA MER1_type 1 98 -243 29 0 0 0 chr17 68706691 68706720 -20797833 + AT_rich Low_complexity Low_complexity 1 29 0 372 253 11 0 chr17 68706769 68706856 -20797697 + MER58 DNA MER1_type 2332 2419 -1 1052 210 56 53 chr17 68706858 68706890 -20797663 + L1ME1 LINE L1 4574 4604 -1542 1590 119 5 5 chr17 68706890 68707109 -20797444 - AluSp SINE Alu -94 219 1 1052 210 56 53 chr17 68707109 68707139 -20797414 + L1ME1 LINE L1 4604 4632 -1514 360 87 11 130 chr17 68707139 68707231 -20797322 + L1PA8 LINE L1 6092 6172 0 1052 210 56 53 chr17 68707231 68707411 -20797142 + L1ME1 LINE L1 4632 4821 -1325 2209 114 0 0 chr17 68707411 68707708 -20796845 + AluSx SINE Alu 1 297 -15 1052 210 56 53 chr17 68707708 68707801 -20796752 + L1ME1 LINE L1 4821 4912 -1234 2288 96 0 7 chr17 68707818 68708119 -20796434 + AluSx SINE Alu 1 299 -13 304 222 0 0 chr17 68708119 68708182 -20796371 + L1MC4 LINE L1 6641 6703 -1339 330 239 23 23 chr17 68708185 68708273 -20796280 + L1MC4 LINE L1 6615 6702 -1340 3058 219 81 32 chr17 68708278 68708554 -20795999 + L1ME1 LINE L1 4920 5181 -985 2140 102 16 38 chr17 68708554 68708868 -20795685 + AluSg SINE Alu 1 307 -3 3058 219 81 32 chr17 68708868 68709381 -20795172 + L1ME1 LINE L1 5181 5667 -499 1663 169 103 3 chr17 68709381 68709712 -20794841 - MLT1A1 LTR MaLR -1 364 1 3058 219 81 32 chr17 68709712 68710111 -20794442 + L1ME1 LINE L1 5667 6162 -4 303 28 0 0 chr17 68710119 68710155 -20794398 + (CA)n Simple_repeat Simple_repeat 2 37 0 2300 176 78 8 chr17 68710159 68710636 -20793917 + L1MB5 LINE L1 5618 6127 -47 644 250 39 17 chr17 68710640 68710820 -20793733 - MER66B LTR ERV1 -10 476 293 605 206 174 86 chr17 68710944 68710974 -20793579 - MER41B LTR ERV1 -209 426 400 182 36 0 36 chr17 68710974 68711002 -20793551 + (TA)n Simple_repeat Simple_repeat 1 27 0 605 206 174 86 chr17 68711002 68711266 -20793287 - MER41B LTR ERV1 -235 400 100 250 139 0 0 chr17 68711266 68711309 -20793244 + L1MB5 LINE L1 6123 6165 -9 2002 116 46 0 chr17 68711649 68711934 -20792619 - AluSx SINE Alu -11 301 4 846 326 197 13 chr17 68712443 68713206 -20791347 + L2 LINE L2 1747 2649 -665 1478 209 107 10 chr17 68713225 68713636 -20790917 + Charlie4a DNA MER1_type 36 486 -22 263 364 27 49 chr17 68713639 68713823 -20790730 + L2 LINE L2 2656 2835 -479 317 250 142 4 chr17 68713833 68713988 -20790565 - MER63A DNA MER1_type 0 210 27 25055 159 24 28 chr17 68713992 68715244 -20789309 - L1PA10 LINE L1 -2 6481 5226 2090 121 3 0 chr17 68715244 68715561 -20788992 - AluSx SINE Alu 0 318 1 25055 159 24 28 chr17 68715561 68717169 -20787384 - L1PA10 LINE L1 -1257 5226 3613 1842 138 0 80 chr17 68717169 68717494 -20787059 - AluSx SINE Alu -13 299 1 25055 159 24 28 chr17 68717494 68721070 -20783483 - L1PA10 LINE L1 -2870 3613 10 252 211 0 18 chr17 68721078 68721135 -20783418 - MER63A DNA MER1_type 0 56 1 21 0 0 0 chr17 68722037 68722058 -20782495 + AT_rich Low_complexity Low_complexity 1 21 0 366 280 30 30 chr17 68722198 68722330 -20782223 + MIR SINE MIR 70 201 -61 4553 177 38 4 chr17 68723908 68725185 -20779368 - L1PB4 LINE L1 -9 6147 4827 243 61 0 0 chr17 68725480 68725513 -20779040 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1864 144 58 19 chr17 68726064 68726425 -20778128 - THE1C LTR MaLR 0 375 1 857 163 0 0 chr17 68726436 68726571 -20777982 + FLAM_C SINE Alu 7 141 -2 1986 161 126 0 chr17 68727106 68727486 -20777067 - MSTA LTR MaLR 0 428 1 189 317 10 59 chr17 68728157 68728258 -20776295 + L2 LINE L2 2990 3085 -187 657 240 67 0 chr17 68728835 68728985 -20775568 + MER58A DNA MER1_type 2 161 0 23 54 0 0 chr17 68729776 68729813 -20774740 + AT_rich Low_complexity Low_complexity 1 37 0 344 187 0 143 chr17 68729888 68729991 -20774562 - MER2 DNA MER2_type -152 87 1 1260 219 48 0 chr17 68730038 68730348 -20774205 + L1ME2 LINE L1 5641 5965 -199 526 194 244 19 chr17 68730387 68730547 -20774006 + LTR40b LTR ERVL 267 462 0 1307 231 147 54 chr17 68730548 68731141 -20773412 + L1ME3 LINE L1 5438 6085 -77 7848 118 45 13 chr17 68731145 68732119 -20772434 - HSMAR2 DNA Mariner -1 1301 275 2172 105 87 3 chr17 68732119 68732453 -20772100 + THE1B LTR MaLR 1 362 -2 7848 118 45 13 chr17 68732453 68732734 -20771819 - HSMAR2 DNA Mariner -1027 275 5 2119 123 0 10 chr17 68732824 68732959 -20771594 + AluSx SINE Alu 1 136 -176 2243 90 0 10 chr17 68732959 68733259 -20771294 + AluSg1 SINE Alu 1 297 -12 2119 123 0 10 chr17 68733259 68733424 -20771129 + AluSx SINE Alu 136 298 -14 3355 217 74 9 chr17 68733700 68734722 -20769831 - L1MB7 LINE L1 0 6184 5099 22 0 0 0 chr17 68736263 68736285 -20768268 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr17 68736648 68736677 -20767876 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr17 68737681 68737708 -20766845 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 404 177 13 25 chr17 68737720 68737799 -20766754 - FLAM SINE Alu -17 116 39 541 255 17 121 chr17 68738053 68738284 -20766269 - L2 LINE L2 0 3313 3107 184 313 55 94 chr17 68738447 68738575 -20765978 - L2 LINE L2 -23 3249 3127 21 0 0 0 chr17 68739586 68739607 -20764946 + AT_rich Low_complexity Low_complexity 1 21 0 3356 106 12 40 chr17 68739625 68740193 -20764360 - L1MA3 LINE L1 0 7724 7173 373 100 17 0 chr17 68740208 68740268 -20764285 - Alu SINE Alu -7 294 234 12363 152 100 30 chr17 68740268 68741022 -20763531 - L1MA3 LINE L1 -536 7188 6489 1611 153 20 48 chr17 68741022 68741200 -20763353 - AluJb SINE Alu -23 289 121 186 71 0 0 chr17 68741200 68741228 -20763325 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1611 153 20 48 chr17 68741228 68741343 -20763210 - AluJb SINE Alu -191 121 4 12363 152 100 30 chr17 68741343 68742452 -20762101 - L1MA3 LINE L1 -1235 6489 5460 2105 52 59 15 chr17 68742452 68742790 -20761763 - AluY SINE Alu 0 350 1 12363 152 100 30 chr17 68742790 68743297 -20761256 - L1MA3 LINE L1 -2264 5460 4990 2230 110 7 7 chr17 68743297 68743606 -20760947 - AluSx SINE Alu -3 309 1 12363 152 100 30 chr17 68743606 68744763 -20759790 - L1MA3 LINE L1 -2734 4990 3916 1859 159 0 7 chr17 68744763 68745058 -20759495 - AluJo SINE Alu -19 293 1 12363 152 100 30 chr17 68745058 68745853 -20758700 - L1MA3 LINE L1 -3808 3916 2523 5358 181 57 10 chr17 68745838 68746925 -20757628 - L1MA3 LINE L1 -6047 1518 13 * 343 246 141 49 chr17 68747528 68747670 -20756883 + MIR3 SINE MIR 6 160 -48 686 269 102 0 chr17 68747670 68747867 -20756686 - MER58A DNA MER1_type 0 224 8 1641 154 84 4 chr17 68747902 68748175 -20756378 + AluSx SINE Alu 3 297 -15 1346 249 142 22 chr17 68748261 68748348 -20756205 - LTR50 LTR ERVL 0 795 720 1622 179 0 42 chr17 68748348 68748660 -20755893 + AluJo SINE Alu 1 299 -13 1346 249 142 22 chr17 68748660 68749081 -20755472 - LTR50 LTR ERVL -75 720 226 865 244 65 21 chr17 68749451 68749590 -20754963 - ERVL LTR ERVL -272 5492 5360 1400 174 34 47 chr17 68749590 68749888 -20754665 - AluJo SINE Alu -18 294 1 865 244 65 21 chr17 68749888 68750027 -20754526 - ERVL LTR ERVL -404 5360 5202 198 309 15 0 chr17 68750064 68750132 -20754421 + L3b LINE CR1 1312 1380 -203 367 294 69 0 chr17 68751151 68751253 -20753300 - L2 LINE L2 -4 3268 3160 363 284 88 56 chr17 68751441 68751691 -20752862 - MLT1H LTR MaLR -221 328 71 1238 174 0 24 chr17 68752153 68752365 -20752188 + AluJb SINE Alu 84 290 -22 1198 167 72 9 chr17 68752539 68752760 -20751793 + MER46A DNA MER2_type 1 235 -1 199 333 0 0 chr17 68753250 68753301 -20751252 + L2 LINE L2 3210 3260 -12 297 340 148 6 chr17 68753435 68753597 -20750956 + L3 LINE CR1 1380 1564 -13 45 0 0 0 chr17 68753598 68753643 -20750910 + AT_rich Low_complexity Low_complexity 1 45 0 1761 148 7 14 chr17 68754265 68754543 -20750010 - AluJb SINE Alu -27 285 10 2103 126 81 0 chr17 68755652 68755986 -20748567 + MER46B DNA MER2_type 1 236 0 5272 150 12 33 chr17 68758070 68758838 -20745715 - L1PA13 LINE L1 -3 6160 5378 1739 67 0 17 chr17 68758838 68759076 -20745477 - L1PA8 LINE L1 0 6172 5939 5272 150 12 33 chr17 68759076 68760105 -20744448 - L1PA13 LINE L1 -785 5378 4402 329 189 46 74 chr17 68760342 68760399 -20744154 - Charlie1 DNA MER1_type 0 2761 2704 1352 147 41 85 chr17 68760399 68760692 -20743861 + AluJb SINE Alu 4 283 -19 329 189 46 74 chr17 68760692 68760809 -20743744 - Charlie1 DNA MER1_type -57 2704 2592 716 225 33 7 chr17 68760872 68761023 -20743530 - Charlie1 DNA MER1_type -2595 166 12 249 286 0 13 chr17 68761052 68761129 -20743424 + L2 LINE L2 2505 2580 -734 809 200 56 17 chr17 68761156 68761336 -20743217 + MER5A DNA MER1_type 2 188 -1 28 71 0 0 chr17 68761874 68761930 -20742623 + AT_rich Low_complexity Low_complexity 1 56 0 1943 110 46 14 chr17 68761930 68762211 -20742342 + AluSq SINE Alu 1 290 -23 317 218 35 11 chr17 68764173 68764260 -20740293 - MIR SINE MIR 0 262 174 943 122 0 0 chr17 68764683 68764830 -20739723 - L1PA14 LINE L1 0 6161 6015 1482 187 60 0 chr17 68765288 68765556 -20738997 + AluJo SINE Alu 1 284 -28 5114 125 55 4 chr17 68765566 68766480 -20738073 + L1MB1 LINE L1 5176 6135 -33 513 191 191 30 chr17 68766677 68766845 -20737708 - MIR SINE MIR -4 258 64 310 313 118 7 chr17 68767487 68767631 -20736922 - MIR3 SINE MIR -30 178 19 1027 288 43 89 chr17 68768392 68769021 -20735532 + L1ME LINE L1 3 602 -5468 1544 213 79 19 chr17 68769040 68769472 -20735081 + MLT1C LTR MaLR 10 467 0 1081 269 12 50 chr17 68769472 68769951 -20734602 + L1M4 LINE L1 3103 3563 -2583 1072 227 77 40 chr17 68769941 68770909 -20733644 - L1ME LINE L1 -522 5713 4782 * 216 0 0 0 chr17 68770909 68770933 -20733620 + (TGGA)n Simple_repeat Simple_repeat 1 24 0 1072 227 77 40 chr17 68770933 68771830 -20732723 - L1ME LINE L1 -1453 4782 3719 1824 244 75 16 chr17 68771869 68772884 -20731669 - L1MEc LINE L1 -3196 3019 1970 2903 190 24 6 chr17 68772889 68773425 -20731128 - MER68 LTR ERV1 -15 547 2 4543 249 67 46 chr17 68773428 68774333 -20730220 - L1MEc LINE L1 -4425 1971 1087 1862 132 3 44 chr17 68774333 68774628 -20729925 - AluSx SINE Alu -26 286 4 4543 249 67 46 chr17 68774628 68775085 -20729468 - L1MEc LINE L1 -5309 1087 564 2036 103 28 7 chr17 68775085 68775375 -20729178 - AluSx SINE Alu -16 296 1 4543 249 67 46 chr17 68775375 68775699 -20728854 - L1MEc LINE L1 -5832 564 248 1096 264 15 3 chr17 68775696 68776026 -20728527 - L1MCa LINE L1 -3272 3154 2821 * 8372 134 55 29 chr17 68776107 68777924 -20726629 - L1MCa LINE L1 -4455 1971 19 819 262 21 26 chr17 68777914 68778147 -20726406 - L1MEc LINE L1 -6128 268 37 * 457 284 136 0 chr17 68779072 68779241 -20725312 - MIR SINE MIR -4 258 67 * 777 375 100 16 chr17 68779240 68780033 -20724520 - L2 LINE L2 -739 2575 1717 541 262 193 0 chr17 68780173 68780360 -20724193 - MIR SINE MIR -35 227 5 1376 206 58 3 chr17 68781135 68781427 -20723126 - AluJb SINE Alu -4 308 1 1754 156 17 17 chr17 68781594 68781896 -20722657 + AluJb SINE Alu 1 302 -10 327 290 11 75 chr17 68781968 68782154 -20722399 - L1MC5 LINE L1 -44 7917 7744 320 248 79 20 chr17 68782995 68783096 -20721457 - 7SK RNA RNA -74 119 13 378 237 45 20 chr17 68783510 68783677 -20720876 + L1MB5 LINE L1 13 469 -6177 * 2758 219 29 10 chr17 68783670 68784396 -20720157 + L1MB5 LINE L1 830 1569 -4973 293 177 0 67 chr17 68784393 68784504 -20720049 + L1MB5 LINE L1 4741 4839 -1805 * 4664 190 45 10 chr17 68784514 68786100 -20718453 + L1MB5 LINE L1 5036 6672 0 28015 124 9 18 chr17 68786153 68790165 -20714388 - L1PA8 LINE L1 -1 6486 2491 2185 116 7 0 chr17 68790165 68790459 -20714094 - AluSx SINE Alu -14 298 3 28015 124 9 18 chr17 68790459 68792924 -20711629 - L1PA8 LINE L1 -3996 2491 4 21 0 0 0 chr17 68793785 68793806 -20710747 + AT_rich Low_complexity Low_complexity 1 21 0 630 197 152 28 chr17 68793829 68794007 -20710546 - L2 LINE L2 0 3313 3114 1742 140 39 18 chr17 68794072 68794357 -20710196 + AluJo SINE Alu 1 291 -21 518 299 32 11 chr17 68794433 68794620 -20709933 - L2 LINE L2 -409 2905 2715 2255 82 0 0 chr17 68795146 68795464 -20709089 - AluY SINE Alu 0 318 1 30 27 0 0 chr17 68795950 68795987 -20708566 + AT_rich Low_complexity Low_complexity 1 37 0 35 24 0 0 chr17 68796275 68796317 -20708236 + AT_rich Low_complexity Low_complexity 1 42 0 207 146 0 0 chr17 68796563 68796604 -20707949 + (TG)n Simple_repeat Simple_repeat 2 42 0 359 309 124 30 chr17 68797090 68797412 -20707141 + L1ME LINE L1 4615 4984 -1162 2148 115 3 3 chr17 68797565 68797860 -20706693 + AluSx SINE Alu 1 295 -17 480 258 80 70 chr17 68797938 68798392 -20706161 + L1ME LINE L1 5245 5721 -400 361 224 94 0 chr17 68798446 68798531 -20706022 + MIR SINE MIR 87 179 -83 520 280 31 78 chr17 68798558 68798859 -20705694 + L1ME4a LINE L1 5677 5944 -177 2839 146 105 2 chr17 68798964 68799499 -20705054 + L1MB7 LINE L1 5571 6160 -24 2959 131 14 24 chr17 68799638 68800133 -20704420 + L1PA16 LINE L1 5668 6157 -9 280 288 12 12 chr17 68800626 68800706 -20703847 - L2 LINE L2 0 3313 3234 789 283 111 0 chr17 68802640 68802866 -20701687 - MIR SINE MIR -10 252 2 201 250 0 0 chr17 68803093 68803137 -20701416 + L2 LINE L2 3209 3252 -20 503 289 0 33 chr17 68803385 68803537 -20701016 + MIR3 SINE MIR 34 180 -28 32 75 0 0 chr17 68804339 68804406 -20700147 + AT_rich Low_complexity Low_complexity 1 67 0 204 211 0 19 chr17 68804808 68804860 -20699693 + (CCA)n Simple_repeat Simple_repeat 3 53 0 2671 168 25 30 chr17 68805719 68806284 -20698269 - L1MB8 LINE L1 -6 6172 5611 209 167 37 93 chr17 68806657 68806711 -20697842 - L3 LINE CR1 0 1577 1527 1887 149 0 20 chr17 68806754 68807050 -20697503 - AluSx SINE Alu -22 290 1 2955 241 138 37 chr17 68807179 68808316 -20696237 - HAL1 LINE L1 0 2507 1205 2132 133 3 0 chr17 68808316 68808610 -20695943 + AluSx SINE Alu 1 295 -17 2955 241 138 37 chr17 68808610 68808850 -20695703 - HAL1 LINE L1 -1302 1205 991 1457 256 94 21 chr17 68808854 68809377 -20695176 - HAL1 LINE L1 -1689 818 258 2387 40 0 0 chr17 68809637 68809909 -20694644 + AluY SINE Alu 22 293 -18 544 218 89 28 chr17 68809967 68810146 -20694407 - L2 LINE L2 0 3313 3124 467 308 62 31 chr17 68811017 68811212 -20693341 - MIR SINE MIR -14 248 48 685 235 67 0 chr17 68811219 68811368 -20693185 - MIR SINE MIR -91 171 13 203 138 0 0 chr17 68811876 68811905 -20692648 + (CA)n Simple_repeat Simple_repeat 2 30 0 289 184 223 39 chr17 68812149 68812252 -20692301 + L2 LINE L2 3156 3277 -36 648 242 38 32 chr17 68812494 68812651 -20691902 - MER20 DNA MER1_type -57 162 5 932 344 48 42 chr17 68812659 68813092 -20691461 + L2 LINE L2 2836 3271 -1 645 291 99 13 chr17 68813542 68813924 -20690629 + L1MC4a LINE L1 4741 5155 -991 1143 204 0 0 chr17 68813930 68814121 -20690432 + AluJb SINE Alu 84 274 -38 183 42 0 0 chr17 68814124 68814148 -20690405 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3081 127 21 3 chr17 68814236 68814875 -20689678 + L1MA7 LINE L1 5100 5747 -544 1665 115 0 34 chr17 68814903 68815172 -20689381 + L1PA15 LINE L1 5572 5831 -335 2084 43 16 0 chr17 68815178 68815434 -20689119 - L1PA3 LINE L1 -1 6154 5895 1838 135 55 3 chr17 68815434 68815742 -20688811 + L1PA15 LINE L1 5836 6162 -3 348 83 0 0 chr17 68815759 68815807 -20688746 + (TG)n Simple_repeat Simple_repeat 2 49 0 2320 139 54 60 chr17 68815815 68816331 -20688222 + L1MA7 LINE L1 5777 6289 -2 517 179 207 8 chr17 68816334 68816619 -20687934 + Charlie1 DNA MER1_type 2261 2630 -131 1036 176 44 33 chr17 68816649 68816922 -20687631 + L1MC4a LINE L1 5255 5530 -2278 5561 136 30 3 chr17 68816924 68817786 -20686767 + Tigger1 DNA MER2_type 92 976 -1442 24 0 0 0 chr17 68817836 68817860 -20686693 + AT_rich Low_complexity Low_complexity 1 24 0 2291 93 0 0 chr17 68818193 68818482 -20686071 + AluSq SINE Alu 1 289 -24 671 272 68 19 chr17 68818533 68818842 -20685711 - L1ME4a LINE L1 -281 5840 5517 471 18 0 0 chr17 68819235 68819291 -20685262 + (TG)n Simple_repeat Simple_repeat 2 57 0 9087 128 21 14 chr17 68820046 68821491 -20683062 + Tigger1 DNA MER2_type 963 2417 -1 4660 210 57 17 chr17 68821492 68822158 -20682395 + L1MC4a LINE L1 6604 7242 -566 1917 179 97 3 chr17 68822158 68822549 -20682004 - MSTA LTR MaLR 0 428 1 4660 210 57 17 chr17 68822549 68822730 -20681823 + L1MC4a LINE L1 7242 7414 -394 2289 98 0 7 chr17 68822730 68823027 -20681526 + AluSg SINE Alu 1 295 -15 4660 210 57 17 chr17 68823027 68823337 -20681216 + L1MC4a LINE L1 7414 7808 0 23 0 0 0 chr17 68824670 68824693 -20679860 + AT_rich Low_complexity Low_complexity 1 23 0 357 332 112 4 chr17 68824771 68825012 -20679541 - L1ME4a LINE L1 -1812 4334 4068 4589 110 9 0 chr17 68825013 68825674 -20678879 - L1PA13 LINE L1 0 6163 5497 21 36 0 0 chr17 68828097 68828125 -20676428 + AT_rich Low_complexity Low_complexity 1 28 0 296 208 0 133 chr17 68828158 68828278 -20676275 + L1MB7 LINE L1 6076 6179 -5 198 373 41 30 chr17 68829348 68829517 -20675036 + L2 LINE L2 2894 3064 -208 39 0 0 0 chr17 68829614 68829653 -20674900 + AT_rich Low_complexity Low_complexity 1 39 0 2332 52 0 0 chr17 68829921 68830193 -20674360 + AluY SINE Alu 28 299 -12 1236 222 117 0 chr17 68830498 68830858 -20673695 + L1ME2 LINE L1 2110 2511 -3635 243 175 0 0 chr17 68830861 68830901 -20673652 + Alu SINE Alu 157 196 -105 1691 173 31 0 chr17 68831022 68831311 -20673242 + AluJo SINE Alu 1 298 -14 420 200 10 0 chr17 68831308 68831407 -20673146 + L1ME2 LINE L1 3840 3939 -2207 1954 126 68 0 chr17 68831407 68831700 -20672853 + MER1B DNA MER1_type 1 313 -26 1103 216 108 47 chr17 68831707 68832115 -20672438 + L1ME2 LINE L1 3936 4368 -1778 1173 242 137 0 chr17 68832125 68832476 -20672077 + MLT1G LTR MaLR 2 400 -190 596 218 145 45 chr17 68832537 68832737 -20671816 + L1ME2 LINE L1 4377 4555 -1591 2489 80 3 0 chr17 68832737 68833039 -20671514 + AluSp SINE Alu 1 303 -10 596 218 145 45 chr17 68833039 68833196 -20671357 + L1ME2 LINE L1 4555 4770 -1376 241 295 0 0 chr17 68833246 68833307 -20671246 + MER63 DNA MER1_type 999 1059 -2 2374 208 66 39 chr17 68833307 68834109 -20670444 + L1ME2 LINE L1 4763 5604 -560 1693 172 7 14 chr17 68834109 68834405 -20670148 - AluJo SINE Alu -18 294 1 2374 208 66 39 chr17 68834405 68834694 -20669859 + L1ME2 LINE L1 5604 5884 -280 662 253 43 0 chr17 68834700 68834886 -20669667 + L1ME2 LINE L1 5952 6145 -19 24 32 0 0 chr17 68834893 68834924 -20669629 + AT_rich Low_complexity Low_complexity 1 31 0 1764 156 33 7 chr17 68835167 68835467 -20669086 - AluJo SINE Alu 0 307 1 23 33 0 0 chr17 68836122 68836152 -20668401 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr17 68836587 68836611 -20667942 + AT_rich Low_complexity Low_complexity 1 24 0 540 232 111 37 chr17 68836886 68837076 -20667477 + MER63A DNA MER1_type 1 204 -6 805 263 74 39 chr17 68840191 68840476 -20664077 - L2 LINE L2 -2 3311 3017 * 2034 269 124 59 chr17 68840454 68841565 -20662988 - L2 LINE L2 -585 2729 1547 195 296 112 31 chr17 68843338 68843436 -20661117 - MIR SINE MIR -98 164 59 267 323 32 0 chr17 68843453 68843577 -20660976 - MER117 DNA MER1_type -1 196 69 559 309 60 10 chr17 68844062 68844263 -20660290 + MIR SINE MIR 12 222 -40 237 33 0 0 chr17 68845747 68845777 -20658776 + (GA)n Simple_repeat Simple_repeat 2 31 0 * 390 42 0 0 chr17 68845776 68845824 -20658729 + (TG)n Simple_repeat Simple_repeat 2 49 0 279 0 0 0 chr17 68846376 68846407 -20658146 + (TG)n Simple_repeat Simple_repeat 2 32 0 1468 189 54 4 chr17 68846464 68846744 -20657809 - AluJb SINE Alu -13 299 6 2068 120 10 13 chr17 68846748 68847047 -20657506 - AluSx SINE Alu -14 298 1 4184 104 44 16 chr17 68847886 68847909 -20656644 - L1MA2 LINE L1 0 6304 6283 198 103 0 0 chr17 68847909 68847938 -20656615 + (TA)n Simple_repeat Simple_repeat 2 30 0 4184 104 44 16 chr17 68847938 68848589 -20655964 - L1MA2 LINE L1 -21 6283 5611 4339 179 25 22 chr17 68848589 68849455 -20655098 - MER52A LTR ERV1 0 1755 908 3850 164 95 46 chr17 68849455 68850306 -20654247 - MER52A LTR ERV1 -658 1097 205 3741 126 27 2 chr17 68850314 68851236 -20653317 - L1M1 LINE L1 -695 5610 4664 259 86 0 0 chr17 68851953 68851988 -20652565 - U2 snRNA snRNA -153 35 1 884 199 6 12 chr17 68852040 68852201 -20652352 + FRAM SINE Alu 1 160 -6 1065 269 100 37 chr17 68852718 68853471 -20651082 + L2 LINE L2 2500 3307 -6 219 222 63 48 chr17 68853637 68853700 -20650853 - L2 LINE L2 -8 3305 3242 323 332 100 72 chr17 68854570 68854695 -20649858 - L2 LINE L2 0 3272 3152 1486 118 41 0 chr17 68854695 68854916 -20649637 - MER30 DNA MER1_type 0 230 1 323 332 100 72 chr17 68854916 68856068 -20648485 - L2 LINE L2 -120 3152 1945 1445 140 20 143 chr17 68856953 68857302 -20647251 - AluYb8 SINE Alu -2 306 1 2516 74 0 0 chr17 68857568 68857877 -20646676 - AluY SINE Alu -2 309 1 1097 256 63 17 chr17 68857954 68858302 -20646251 - MLT1J1 LTR MaLR 0 446 83 2455 77 0 3 chr17 68858582 68858882 -20645671 + AluSq SINE Alu 1 299 -14 443 269 172 8 chr17 68859980 68860114 -20644439 - MIR SINE MIR -70 192 37 1950 158 3 7 chr17 68860293 68860596 -20643957 - AluJo SINE Alu -10 302 1 24 24 0 24 chr17 68861078 68861100 -20643453 + AT_rich Low_complexity Low_complexity 1 23 -18 2079 136 0 0 chr17 68861100 68861386 -20643167 + AluSx SINE Alu 3 288 -24 24 24 0 24 chr17 68861386 68861405 -20643148 + AT_rich Low_complexity Low_complexity 23 41 0 1958 158 3 7 chr17 68861432 68861735 -20642818 - AluJo SINE Alu -8 304 3 355 347 40 17 chr17 68861917 68862090 -20642463 - L2 LINE L2 -170 3102 2926 193 347 16 32 chr17 68862122 68862246 -20642307 - L2 LINE L2 -464 2850 2729 2204 118 7 3 chr17 68863207 68863504 -20641049 + AluSg SINE Alu 1 298 -12 1281 68 0 57 chr17 68863551 68863727 -20640826 + AluY SINE Alu 1 166 -145 641 126 213 46 chr17 68863727 68863901 -20640652 + THE1C LTR MaLR 62 264 -111 1521 81 0 0 chr17 68864214 68864399 -20640154 - AluY SINE Alu -9 302 118 4648 109 85 4 chr17 68864406 68865147 -20639406 - THE1C-int LTR MaLR -779 801 1 1982 103 94 26 chr17 68865147 68865498 -20639055 - THE1C LTR MaLR 0 375 1 182 114 0 29 chr17 68865720 68865755 -20638798 + (CATA)n Simple_repeat Simple_repeat 2 35 0 289 236 55 27 chr17 68865771 68865881 -20638672 - MLT1L LTR MaLR 0 615 503 448 308 116 18 chr17 68866265 68866541 -20638012 - L2 LINE L2 -942 2372 2070 1850 120 8 0 chr17 68866824 68867082 -20637471 + AluSx SINE Alu 37 296 -16 277 349 160 0 chr17 68867823 68867929 -20636624 - L2 LINE L2 0 3272 3150 713 201 5 93 chr17 68870315 68870441 -20634112 - MER5B DNA MER1_type 0 178 73 4503 141 33 5 chr17 68870441 68871236 -20633317 - L1MC2 LINE L1 0 6344 5528 713 201 5 93 chr17 68871236 68871303 -20633250 - MER5B DNA MER1_type -105 73 2 629 280 75 23 chr17 68871362 68871469 -20633084 + MIR SINE MIR 2 102 -160 1759 155 4 7 chr17 68871469 68871747 -20632806 - AluJo SINE Alu -11 301 25 629 280 75 23 chr17 68871747 68871853 -20632700 + MIR SINE MIR 102 226 -36 352 252 52 74 chr17 68872438 68872573 -20631980 + MIR SINE MIR 123 254 -8 807 234 82 42 chr17 68873627 68874007 -20630546 + L1MC5 LINE L1 7532 7926 -35 30 77 0 0 chr17 68874138 68874203 -20630350 + AT_rich Low_complexity Low_complexity 1 65 0 1688 180 14 3 chr17 68874255 68874549 -20630004 - AluJo SINE Alu -15 297 1 916 272 34 23 chr17 68875303 68875707 -20628846 - MLT1J2 LTR MaLR 0 450 1 32 57 0 0 chr17 68876270 68876323 -20628230 + AT_rich Low_complexity Low_complexity 1 53 0 1141 218 118 15 chr17 68877893 68878164 -20626389 - AluJo SINE Alu -3 299 1 296 287 48 4 chr17 68878754 68878885 -20625668 + MIR SINE MIR 18 154 -54 217 352 28 0 chr17 68879003 68879111 -20625442 + L2 LINE L2 1859 1969 -1345 2373 90 0 3 chr17 68879125 68879426 -20625127 - AluSx SINE Alu -12 300 1 271 182 0 0 chr17 68880036 68880091 -20624462 - L1MD3 LINE L1 -14 7981 7927 1062 50 14 0 chr17 68880091 68880232 -20624321 + L1MA5 LINE L1 6156 6298 -2 2929 168 16 202 chr17 68880264 68881156 -20623397 - L1MC4a LINE L1 -40 7768 7187 2355 78 3 3 chr17 68881156 68881471 -20623082 - AluSq SINE Alu 0 315 1 2929 168 16 202 chr17 68881471 68881866 -20622687 - L1MC4a LINE L1 -621 7187 6720 183 299 154 51 chr17 68882228 68882345 -20622208 + L2 LINE L2 3141 3269 -3 224 307 20 92 chr17 68883510 68883649 -20620904 - MIR3 SINE MIR -1 207 80 335 351 69 23 chr17 68883649 68883823 -20620730 + MIR SINE MIR 1 182 -80 537 207 118 73 chr17 68883903 68884018 -20620535 + MER63 DNA MER1_type 3 111 -950 1946 133 41 19 chr17 68884018 68884385 -20620168 + L1PA16 LINE L1 5792 6166 0 2430 97 3 0 chr17 68884392 68884700 -20619853 + AluSq SINE Alu 1 309 -4 537 207 118 73 chr17 68884700 68884934 -20619619 + MER63 DNA MER1_type 116 435 -626 1574 192 66 30 chr17 68884954 68885318 -20619235 + MER63 DNA MER1_type 665 1041 -19 1826 158 9 44 chr17 68885562 68885879 -20618674 + AluJb SINE Alu 1 306 -6 23 33 0 0 chr17 68887960 68887990 -20616563 + AT_rich Low_complexity Low_complexity 1 30 0 2399 90 0 29 chr17 68888041 68888352 -20616201 - AluSx SINE Alu -10 302 1 507 177 0 118 chr17 68888734 68888920 -20615633 - MER104 DNA Tc2 -3 177 14 438 306 21 7 chr17 68889291 68889435 -20615118 + L2 LINE L2 2589 2734 -580 184 125 200 0 chr17 68889794 68889834 -20614719 + MIR SINE MIR 213 260 -2 225 254 17 17 chr17 68889897 68889956 -20614597 + HSATI Satellite Satellite 233 291 -286 410 360 124 17 chr17 68895379 68895782 -20608771 - L2 LINE L2 -529 2785 2340 1834 160 6 49 chr17 68896560 68896885 -20607668 - AluJo SINE Alu -1 311 1 1484 117 22 59 chr17 68896926 68897199 -20607354 - Tigger3(Golem) DNA MER2_type 0 3038 2776 1361 118 30 135 chr17 68897199 68897228 -20607325 - L1MA8 LINE L1 -35 6256 6226 1133 152 12 68 chr17 68897228 68897478 -20607075 - MER46A DNA MER2_type 0 236 1 1361 118 30 135 chr17 68897478 68897812 -20606741 - L1MA8 LINE L1 -65 6226 5931 2103 94 4 0 chr17 68898023 68898289 -20606264 + AluSx SINE Alu 45 311 -1 236 308 0 13 chr17 68899997 68900075 -20604478 + CT-rich Low_complexity Low_complexity 2 78 0 255 196 141 43 chr17 68905022 68905114 -20599439 - MIR SINE MIR -6 256 156 198 0 0 0 chr17 68911008 68911030 -20593523 + (TAAG)n Simple_repeat Simple_repeat 4 25 0 2502 60 0 10 chr17 68916127 68916426 -20588127 + AluY SINE Alu 1 296 -15 2313 112 20 0 chr17 68916470 68916774 -20587779 - AluSx SINE Alu -2 310 1 2015 142 3 3 chr17 68916780 68917076 -20587477 - AluJo SINE Alu -16 296 1 283 319 116 0 chr17 68917588 68917726 -20586827 - MIR SINE MIR -28 234 81 234 0 0 0 chr17 68918088 68918114 -20586439 + (A)n Simple_repeat Simple_repeat 1 26 0 2518 68 3 10 chr17 68918204 68918511 -20586042 + AluSp SINE Alu 1 305 -8 2833 106 116 21 chr17 68918731 68919212 -20585341 + MER1A DNA MER1_type 1 527 0 1607 67 90 22 chr17 68920450 68920673 -20583880 - AluY SINE Alu -10 301 64 1344 172 22 0 chr17 68922145 68922377 -20582176 + MER61-int LTR ERV1 3745 3981 -1236 226 150 33 33 chr17 68925839 68925899 -20578654 + C-rich Low_complexity Low_complexity 6 65 0 2113 123 10 26 chr17 68926653 68926962 -20577591 + AluSx SINE Alu 1 304 -8 369 308 130 40 chr17 68927045 68927321 -20577232 - L1ME4a LINE L1 -128 5993 5693 249 337 105 12 chr17 68928662 68928834 -20575719 - MIR SINE MIR -8 254 67 315 204 65 21 chr17 68930912 68931005 -20573548 - ORSL DNA AcHobo -41 234 138 1585 187 14 14 chr17 68931028 68931317 -20573236 - AluJo SINE Alu -11 301 13 33 0 0 0 chr17 68931392 68931425 -20573128 + AT_rich Low_complexity Low_complexity 1 33 0 1027 114 13 13 chr17 68931426 68931584 -20572969 - AluSp SINE Alu -56 257 100 363 210 0 12 chr17 68931596 68931677 -20572876 - ORSL DNA AcHobo -193 82 3 314 367 47 0 chr17 68931712 68931881 -20572672 + MIR SINE MIR 72 248 -14 2194 125 3 7 chr17 68932293 68932598 -20571955 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr17 68932988 68933008 -20571545 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 215 206 0 63 chr17 68933587 68933650 -20570903 + C-rich Low_complexity Low_complexity 5 63 0 2266 78 3 0 chr17 68935700 68935995 -20568558 + AluSp SINE Alu 15 310 -3 279 189 168 21 chr17 68936085 68936180 -20568373 + L2 LINE L2 2952 3060 -253 354 251 86 75 chr17 68936386 68936451 -20568102 + MER53 DNA DNA 1 64 -125 2339 95 0 0 chr17 68936451 68936756 -20567797 + AluSx SINE Alu 1 305 -7 354 251 86 75 chr17 68936756 68936828 -20567725 + MER53 DNA DNA 64 143 -46 1823 158 3 3 chr17 68936828 68937120 -20567433 + AluSx SINE Alu 1 292 -20 354 251 86 75 chr17 68937120 68937168 -20567385 + MER53 DNA DNA 143 189 0 335 283 75 8 chr17 68937370 68937490 -20567063 - L2 LINE L2 0 3313 3186 2158 83 31 0 chr17 68938381 68938669 -20565884 - AluSp SINE Alu -16 297 1 377 318 73 80 chr17 68938979 68939120 -20565433 - L2 LINE L2 -1 3312 3171 1537 125 4 59 chr17 68939120 68939376 -20565177 + AluSx SINE Alu 3 244 -68 377 318 73 80 chr17 68939376 68939646 -20564907 - L2 LINE L2 -142 3171 2904 2204 120 0 0 chr17 68941689 68941989 -20562564 - AluSx SINE Alu -12 300 1 205 25 0 75 chr17 68942341 68942381 -20562172 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 5415 43 29 138 chr17 68943203 68944175 -20560378 + SVA Other Other 1 866 -520 6365 37 10 14 chr17 68944192 68945090 -20559463 + SVA Other Other 613 1381 -5 2329 84 3 0 chr17 68945099 68945398 -20559155 + AluSp SINE Alu 1 300 -13 2112 123 7 0 chr17 68945673 68945983 -20558570 + AluSx SINE Alu 1 312 0 553 257 88 0 chr17 68946121 68946292 -20558261 + MIR SINE MIR 55 240 -22 2165 110 7 0 chr17 68946472 68946771 -20557782 - AluSp SINE Alu -12 301 1 228 269 17 84 chr17 68947487 68947606 -20556947 + L2 LINE L2 2950 3060 -212 2626 127 60 0 chr17 68947660 68948123 -20556430 + MER41C LTR ERV1 1 491 -63 327 312 68 41 chr17 68948231 68948452 -20556101 + MIR SINE MIR 20 246 -16 207 270 45 36 chr17 68948487 68948598 -20555955 + L3 LINE CR1 833 944 -633 230 371 31 71 chr17 68948660 68948836 -20555717 + L3b LINE CR1 1102 1284 -299 219 69 0 0 chr17 68948836 68948865 -20555688 + (TG)n Simple_repeat Simple_repeat 2 30 0 230 371 31 71 chr17 68948865 68948887 -20555666 + L3b LINE CR1 1284 1305 -278 2298 106 3 0 chr17 68948887 68949198 -20555355 - AluSq SINE Alu -1 312 1 230 371 31 71 chr17 68949198 68949292 -20555261 + L3b LINE CR1 1305 1383 -200 621 100 0 0 chr17 68950199 68950289 -20554264 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 925 195 21 5 chr17 68950292 68950482 -20554071 - AluSg/x SINE Alu 0 312 120 204 316 125 53 chr17 68950663 68950815 -20553738 - L2 LINE L2 -34 3279 3117 424 245 31 0 chr17 68950820 68950918 -20553635 - MIR SINE MIR -86 176 76 2068 118 3 0 chr17 68951038 68951327 -20553226 + AluJo SINE Alu 1 290 -22 308 304 17 37 chr17 68951599 68951767 -20552786 + MIR SINE MIR 34 201 -54 1785 141 24 14 chr17 68951771 68952068 -20552485 + AluJb SINE Alu 1 300 -12 285 278 9 83 chr17 68952484 68952592 -20551961 - MIR SINE MIR -71 191 92 2037 112 16 7 chr17 68953296 68953600 -20550953 - AluSx SINE Alu -5 307 1 209 398 20 0 chr17 68954518 68954616 -20549937 + MIR SINE MIR 92 191 -71 * 223 303 174 44 chr17 68954611 68955047 -20549506 + L2 LINE L2 2807 3299 -14 556 306 20 36 chr17 68956734 68956930 -20547623 - MIR3 SINE MIR -13 195 3 399 56 0 0 chr17 68957011 68957065 -20547488 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 1504 128 165 24 chr17 68957735 68958108 -20546445 - MSTA LTR MaLR -6 422 7 849 265 47 21 chr17 68958258 68958492 -20546061 - MIR SINE MIR 0 262 23 364 157 33 141 chr17 68958613 68958656 -20545897 - LTR24C LTR ERV1 -277 358 312 2102 124 13 0 chr17 68958656 68958962 -20545591 + AluSx SINE Alu 1 310 -2 364 157 33 141 chr17 68958962 68959039 -20545514 - LTR24C LTR ERV1 -323 312 251 627 298 31 4 chr17 68959042 68959297 -20545256 + L1M4 LINE L1 5016 5277 -869 1215 77 6 0 chr17 68959400 68959556 -20544997 + AluY SINE Alu 134 290 -21 637 157 67 3 chr17 68959571 68959784 -20544769 + AluJ SINE Alu 11 290 -22 353 217 202 44 chr17 68959784 68960056 -20544497 - Charlie2 DNA MER1_type -424 2438 2124 1211 124 0 0 chr17 68960092 68960270 -20544283 + AluSg/x SINE Alu 132 309 -1 1602 111 0 0 chr17 68960279 68960496 -20544057 + AluSx SINE Alu 1 217 -95 1689 181 3 10 chr17 68960537 68960829 -20543724 + AluJb SINE Alu 11 300 -12 241 232 29 0 chr17 68960832 68960901 -20543652 - Charlie2 DNA MER1_type -879 1983 1913 264 309 154 27 chr17 68962215 68962403 -20542150 - MIR SINE MIR -20 242 31 984 54 23 0 chr17 68963051 68963181 -20541372 + AluSq/x SINE Alu 1 133 -179 225 0 0 0 chr17 68963181 68963206 -20541347 + (A)n Simple_repeat Simple_repeat 1 25 0 521 247 50 77 chr17 68964359 68964541 -20540012 - MIR SINE MIR -73 189 13 818 268 69 12 chr17 68964966 68965212 -20539341 - MIR SINE MIR 0 262 3 234 91 0 0 chr17 68967844 68967877 -20536676 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 1994 106 13 29 chr17 68968688 68969000 -20535553 - AluSx SINE Alu -5 307 1 282 29 0 0 chr17 68969402 68969437 -20535116 + (CCCCG)n Simple_repeat Simple_repeat 1 35 0 24 95 0 0 chr17 68969485 68969527 -20535026 + GC_rich Low_complexity Low_complexity 1 42 0 242 183 14 0 chr17 68969599 68969670 -20534883 + G-rich Low_complexity Low_complexity 2 73 0 30 83 0 0 chr17 68969682 68969730 -20534823 + GC_rich Low_complexity Low_complexity 1 48 0 307 296 148 30 chr17 68971482 68971651 -20532902 - MER5A DNA MER1_type 0 189 1 319 205 51 13 chr17 68971673 68971751 -20532802 - MIR SINE MIR -92 116 36 195 167 0 0 chr17 68971982 68972024 -20532529 + (TG)n Simple_repeat Simple_repeat 1 42 0 1031 104 191 6 chr17 68972804 68972987 -20531566 - AluJo SINE Alu -11 301 85 2190 89 0 3 chr17 68975250 68975568 -20528985 - AluSx SINE Alu 0 317 1 443 230 55 85 chr17 68977684 68977849 -20526704 + MIR3 SINE MIR 42 201 -7 552 223 31 8 chr17 68979604 68979734 -20524819 - MIR SINE MIR -110 152 20 417 292 73 62 chr17 68981555 68982074 -20522479 + L2 LINE L2 2548 3059 -213 214 234 0 0 chr17 68982174 68982221 -20522332 + L2 LINE L2 3263 3309 -4 236 301 193 56 chr17 68982894 68982937 -20521616 - MIR SINE MIR -1 261 225 817 181 26 104 chr17 68982937 68983015 -20521538 - MER45A DNA AcHobo -1403 178 96 2049 136 0 7 chr17 68983015 68983316 -20521237 + AluSx SINE Alu 1 299 -13 817 181 26 104 chr17 68983316 68983332 -20521221 - MER45A DNA AcHobo -1485 96 80 2278 80 0 46 chr17 68983332 68983656 -20520897 + AluSg SINE Alu 2 310 0 817 181 26 104 chr17 68983656 68983753 -20520800 - MER45A DNA AcHobo -1501 80 1 236 301 193 56 chr17 68983753 68983922 -20520631 - MIR SINE MIR -37 225 20 2031 112 6 13 chr17 68984102 68984414 -20520139 - AluSx SINE Alu -1 311 2 234 325 245 0 chr17 68985488 68985639 -20518914 - MIR SINE MIR -51 211 24 344 155 0 0 chr17 68985822 68985880 -20518673 + MIR SINE MIR 66 123 -85 433 301 130 25 chr17 68986598 68986837 -20517716 + L2 LINE L2 2817 3080 -192 2034 114 0 20 chr17 68986839 68987136 -20517417 + AluSg1 SINE Alu 1 291 -18 21 0 0 0 chr17 68987158 68987179 -20517374 + AT_rich Low_complexity Low_complexity 1 21 0 247 196 36 0 chr17 68987324 68987380 -20517173 + MIR SINE MIR 83 140 -68 1917 95 31 44 chr17 68987980 68988274 -20516279 - AluSx SINE Alu -11 301 12 313 304 0 59 chr17 68988298 68988433 -20516120 - MIR SINE MIR -46 216 90 569 298 13 6 chr17 68989361 68989519 -20515034 - MIR SINE MIR -100 162 4 514 294 59 6 chr17 68991394 68991564 -20512989 + MIR SINE MIR 11 189 -73 1915 79 65 24 chr17 68992686 68992976 -20511577 + AluY SINE Alu 1 302 -9 593 273 32 0 chr17 68993664 68993818 -20510735 - MIR SINE MIR -1 261 103 398 125 50 12 chr17 68993826 68993906 -20510647 + L1ME3A LINE L1 6015 6097 -73 815 216 0 43 chr17 68993951 68994136 -20510417 + AluJo SINE Alu 121 297 -15 185 282 103 13 chr17 68994145 68994223 -20510330 - MIR SINE MIR -165 97 13 1097 204 86 30 chr17 68994260 68994666 -20509887 - Charlie2 DNA MER1_type -3 2859 2431 1382 164 23 77 chr17 68994666 68994976 -20509577 + AluJo SINE Alu 1 293 -19 1823 183 0 0 chr17 68995161 68995472 -20509081 - AluSp SINE Alu -2 311 1 1771 175 28 5 chr17 68995472 68995680 -20508873 - L1M4 LINE L1 -943 5203 4980 1957 157 23 0 chr17 68995680 68995985 -20508568 - AluJb SINE Alu 0 312 1 1771 175 28 5 chr17 68995985 68996170 -20508383 - L1M4 LINE L1 -1166 4980 4801 380 401 0 0 chr17 68996718 68996870 -20507683 - L2 LINE L2 -25 3247 3096 295 258 86 11 chr17 68998172 68998265 -20506288 + MIR3 SINE MIR 86 185 -23 23 0 0 0 chr17 68998965 68998988 -20505565 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr17 68999066 68999096 -20505457 + GC_rich Low_complexity Low_complexity 1 30 0 234 91 0 0 chr17 68999096 68999129 -20505424 + (CTG)n Simple_repeat Simple_repeat 2 34 0 42 0 0 0 chr17 68999320 68999362 -20505191 + GC_rich Low_complexity Low_complexity 1 42 0 1787 167 17 7 chr17 69000377 69000677 -20503876 + AluJb SINE Alu 1 303 -9 181 318 125 0 chr17 69000693 69000781 -20503772 - MIR SINE MIR -77 131 33 216 303 53 0 chr17 69002674 69002750 -20501803 - MIR SINE MIR -106 156 77 2209 81 7 16 chr17 69004017 69004326 -20500227 + AluSq SINE Alu 2 307 -6 187 302 0 0 chr17 69005329 69005372 -20499181 + L2 LINE L2 3030 3072 -200 2270 67 14 0 chr17 69007513 69007810 -20496743 + AluY SINE Alu 1 301 -10 629 170 0 0 chr17 69007877 69007983 -20496570 + FLAM_C SINE Alu 37 142 -1 244 288 129 23 chr17 69008156 69008288 -20496265 - MIR SINE MIR -42 220 75 1006 118 0 0 chr17 69009972 69010107 -20494446 + AluSq/x SINE Alu 1 135 -177 1774 146 48 10 chr17 69010107 69010401 -20494152 + AluJb SINE Alu 1 305 -7 231 311 39 10 chr17 69011941 69012044 -20492509 - MIR SINE MIR -64 144 39 221 135 19 0 chr17 69012086 69012138 -20492415 + CT-rich Low_complexity Low_complexity 1 53 0 350 269 125 34 chr17 69012429 69012632 -20491921 + MIR SINE MIR 2 223 -39 599 251 105 123 chr17 69013842 69014411 -20490142 - MLT1G LTR MaLR -1 589 31 253 328 34 25 chr17 69014636 69014755 -20489798 + L3b LINE CR1 1279 1398 -185 901 132 0 7 chr17 69014776 69014912 -20489641 + FLAM_C SINE Alu 1 135 -8 201 311 9 9 chr17 69016144 69016250 -20488303 + (TG)n Simple_repeat Simple_repeat 1 106 0 326 291 60 30 chr17 69016958 69017092 -20487461 + MIR3 SINE MIR 3 140 -68 277 295 124 9 chr17 69017452 69017557 -20486996 + L2 LINE L2 3155 3271 -1 224 337 12 12 chr17 69018077 69018160 -20486393 - L3 LINE CR1 -104 1473 1391 248 71 48 0 chr17 69019124 69019166 -20485387 + (CCCTG)n Simple_repeat Simple_repeat 3 46 0 339 242 215 5 chr17 69020368 69020554 -20483999 - L1ME4a LINE L1 -27 6094 5870 2308 84 0 7 chr17 69021061 69021360 -20483193 - AluSq SINE Alu -16 297 1 2001 88 3 60 chr17 69021531 69021850 -20482703 - AluSx SINE Alu -11 301 1 245 342 70 6 chr17 69022186 69022253 -20482300 + MIR SINE MIR 57 118 -144 2564 58 0 0 chr17 69022253 69022564 -20481989 - AluY SINE Alu 0 311 1 245 342 70 6 chr17 69022564 69022654 -20481899 + MIR SINE MIR 118 224 -38 244 182 13 42 chr17 69022944 69023110 -20481443 + CT-rich Low_complexity Low_complexity 1 161 0 25 51 0 0 chr17 69024152 69024191 -20480362 + GC_rich Low_complexity Low_complexity 1 39 0 637 179 45 0 chr17 69024410 69024522 -20480031 - FLAM_C SINE Alu -16 117 1 1438 166 99 42 chr17 69025104 69025388 -20479165 - AluJb SINE Alu 0 302 3 186 43 0 0 chr17 69025530 69025553 -20479000 + (CAA)n Simple_repeat Simple_repeat 2 24 0 951 208 61 5 chr17 69025615 69025827 -20478726 + MIR SINE MIR 31 254 -8 21 36 0 0 chr17 69025850 69025878 -20478675 + AT_rich Low_complexity Low_complexity 1 28 0 1860 114 21 7 chr17 69025888 69026169 -20478384 + AluSx SINE Alu 11 295 -17 1532 185 40 4 chr17 69026280 69026556 -20477997 - AluJb SINE Alu -26 286 1 469 173 0 12 chr17 69026579 69026660 -20477893 + MER116 DNA Mariner 1 80 0 1519 188 0 19 chr17 69026790 69027061 -20477492 + AluJo SINE Alu 30 295 -17 342 0 0 0 chr17 69027061 69027099 -20477454 + (TC)n Simple_repeat Simple_repeat 2 39 0 2072 125 0 10 chr17 69027155 69027459 -20477094 + AluSx SINE Alu 1 301 -11 253 200 179 7 chr17 69027513 69027653 -20476900 + L1MC/D LINE L1 5272 5435 -2560 378 162 0 0 chr17 69027972 69028040 -20476513 - MER3 DNA MER1_type 0 209 142 850 207 73 0 chr17 69028053 69028217 -20476336 + AluJo SINE Alu 4 179 -133 1851 105 0 0 chr17 69028319 69028567 -20475986 - AluSx SINE Alu -64 248 1 619 176 20 25 chr17 69028581 69028719 -20475834 - MER3 DNA MER1_type -84 125 1 2080 93 31 0 chr17 69028888 69029178 -20475375 - AluSg SINE Alu -11 299 1 2209 102 7 0 chr17 69030470 69030765 -20473788 + AluSx SINE Alu 1 297 -15 1047 175 80 5 chr17 69030944 69031144 -20473409 + AluJo SINE Alu 82 296 -16 2631 23 0 16 chr17 69031210 69031520 -20473033 + AluY SINE Alu 1 305 -6 1141 97 0 7 chr17 69032270 69032424 -20472129 + AluSp SINE Alu 1 153 -160 196 184 122 0 chr17 69032616 69032665 -20471888 + MIR SINE MIR 92 146 -62 1646 138 41 66 chr17 69034019 69034338 -20470215 + AluSx SINE Alu 1 311 -1 873 121 0 0 chr17 69034573 69034705 -20469848 + AluY SINE Alu 178 309 -2 2037 117 0 33 chr17 69034865 69035165 -20469388 + AluSx SINE Alu 1 290 -22 1992 138 0 10 chr17 69035175 69035473 -20469080 + AluJb SINE Alu 1 295 -17 2208 104 7 0 chr17 69035497 69035796 -20468757 + AluSx SINE Alu 1 301 -11 2146 110 3 3 chr17 69036173 69036472 -20468081 + AluSx SINE Alu 1 299 -13 571 273 239 0 chr17 69036863 69037072 -20467481 - MIR SINE MIR -2 260 2 2000 117 40 10 chr17 69037978 69038278 -20466275 - AluSq SINE Alu -4 309 1 248 250 0 0 chr17 69039999 69040055 -20464498 - L2 LINE L2 0 3313 3258 876 154 0 0 chr17 69040277 69040407 -20464146 + FRAM SINE Alu 8 137 -39 1917 151 3 6 chr17 69040411 69040723 -20463830 - AluJb SINE Alu -1 311 1 1208 110 0 0 chr17 69040734 69040898 -20463655 - AluSx SINE Alu -20 292 129 1064 100 27 0 chr17 69042654 69042804 -20461749 - AluSx SINE Alu -158 154 1 2344 72 0 0 chr17 69043992 69044285 -20460268 + AluSq SINE Alu 1 293 -20 670 219 44 58 chr17 69044293 69044567 -20459986 + L1ME4a LINE L1 5778 6047 -74 391 292 46 0 chr17 69044691 69044821 -20459732 - L1MC4a LINE L1 -1941 5867 5732 1754 169 13 3 chr17 69044840 69045142 -20459411 + AluJo SINE Alu 1 305 -7 827 222 13 0 chr17 69045142 69045295 -20459258 + AluJb SINE Alu 137 291 -21 2397 84 0 0 chr17 69045300 69045608 -20458945 + AluY SINE Alu 1 308 -3 327 49 0 0 chr17 69045773 69045814 -20458739 + (TTTTG)n Simple_repeat Simple_repeat 3 43 0 1466 194 4 11 chr17 69045815 69046094 -20458459 - AluJo SINE Alu -35 277 1 317 326 38 81 chr17 69046179 69046274 -20458279 - L2 LINE L2 -193 3079 2982 2251 40 57 17 chr17 69046274 69046570 -20457983 + AluY SINE Alu 1 308 -3 317 326 38 81 chr17 69046570 69046710 -20457843 - L2 LINE L2 -290 2982 2854 708 219 12 25 chr17 69047704 69047864 -20456689 + FRAM SINE Alu 4 161 -5 541 280 55 66 chr17 69047942 69048004 -20456549 + MIR SINE MIR 9 70 -192 2117 97 31 0 chr17 69048004 69048292 -20456261 + AluSp SINE Alu 1 297 -16 541 280 55 66 chr17 69048292 69048486 -20456067 + MIR SINE MIR 70 262 0 2079 138 0 0 chr17 69048530 69048828 -20455725 + AluSx SINE Alu 1 298 -14 2088 66 0 4 chr17 69048828 69049098 -20455455 + AluY SINE Alu 27 297 -14 406 243 159 68 chr17 69049098 69049349 -20455204 + L1MC4a LINE L1 5624 5897 -1911 1312 168 69 44 chr17 69049359 69049633 -20454920 + AluJb SINE Alu 10 290 -22 858 157 0 15 chr17 69049680 69049814 -20454739 - FLAM_C SINE Alu 0 133 2 1596 200 0 16 chr17 69050371 69050676 -20453877 - AluJb SINE Alu -12 300 1 1987 104 69 0 chr17 69050722 69051010 -20453543 - AluSx SINE Alu -2 310 3 483 122 0 24 chr17 69051141 69051223 -20453330 + MADE1 DNA Mariner 1 80 0 481 245 21 75 chr17 69051730 69051918 -20452635 - MER5B DNA MER1_type 0 178 1 258 298 202 24 chr17 69052940 69052993 -20451560 + L2 LINE L2 3127 3169 -103 265 246 0 0 chr17 69052993 69053050 -20451503 + MIR SINE MIR 194 250 -12 258 298 202 24 chr17 69053050 69053064 -20451489 + L2 LINE L2 3169 3272 0 1802 162 0 13 chr17 69053174 69053483 -20451070 - AluJb SINE Alu -7 305 1 59 65 0 0 chr17 69056301 69056409 -20448144 + GC_rich Low_complexity Low_complexity 1 108 0 262 174 228 11 chr17 69056550 69056642 -20447911 - L1ME4a LINE L1 -5 6116 6005 266 276 65 8 chr17 69056702 69056825 -20447728 - L1ME4a LINE L1 -249 5872 5743 2311 73 0 3 chr17 69057022 69057325 -20447228 - AluSx SINE Alu -2 310 9 444 270 147 18 chr17 69057547 69057710 -20446843 - MIR SINE MIR -72 190 7 32 26 0 0 chr17 69057750 69057789 -20446764 + AT_rich Low_complexity Low_complexity 1 39 0 362 96 0 0 chr17 69057798 69057850 -20446703 - MER106B DNA MER1_type -908 151 100 725 184 0 24 chr17 69057860 69057985 -20446568 - FLAM_C SINE Alu -17 126 5 1223 255 106 52 chr17 69057988 69058012 -20446541 + L2 LINE L2 2421 2442 -871 2074 114 35 41 chr17 69058012 69058342 -20446211 - MER47A DNA MER2_type -1957 366 37 2280 92 3 3 chr17 69058342 69058647 -20445906 + AluSq SINE Alu 1 305 -8 2074 114 35 41 chr17 69058647 69058684 -20445869 - MER47A DNA MER2_type -2286 37 1 1223 255 106 52 chr17 69058684 69058788 -20445765 + L2 LINE L2 2442 2539 -774 2052 119 24 0 chr17 69058788 69059083 -20445470 + AluSx SINE Alu 1 302 -10 360 0 0 0 chr17 69059084 69059124 -20445429 + (CA)n Simple_repeat Simple_repeat 2 41 0 1223 255 106 52 chr17 69059124 69059745 -20444808 + L2 LINE L2 2538 3278 -35 324 302 227 66 chr17 69059864 69060557 -20443996 + L2 LINE L2 2185 2987 -285 1787 119 53 20 chr17 69060560 69060862 -20443691 - AluSx SINE Alu 0 312 1 620 175 29 0 chr17 69060959 69061062 -20443491 + U6 snRNA snRNA 1 106 -1 566 135 192 0 chr17 69061062 69061190 -20443363 + L1MA2 LINE L1 6170 6317 0 1940 153 0 0 chr17 69061242 69061549 -20443004 + AluJb SINE Alu 1 307 -5 373 240 20 89 chr17 69061583 69061729 -20442824 - L2 LINE L2 0 3313 3178 490 209 118 46 chr17 69061959 69062112 -20442441 + MIR SINE MIR 17 180 -82 395 242 93 66 chr17 69062360 69062533 -20442020 - MER5A DNA MER1_type 0 189 1 2148 125 0 0 chr17 69063097 69063401 -20441152 - AluSx SINE Alu -8 304 1 340 328 108 27 chr17 69063479 69063665 -20440888 - L1MC4a LINE L1 -1966 5842 5642 1982 139 7 0 chr17 69063823 69064133 -20440420 - AluSx SINE Alu 0 312 1 1997 125 10 0 chr17 69064613 69064908 -20439645 + AluSx SINE Alu 1 298 -14 2145 96 10 0 chr17 69064912 69065204 -20439349 + AluSg SINE Alu 1 295 -15 965 169 0 6 chr17 69065204 69065376 -20439177 + AluJb SINE Alu 134 304 -8 912 182 24 0 chr17 69065688 69065853 -20438700 + AluSg/x SINE Alu 137 305 -7 1645 163 17 0 chr17 69066215 69066516 -20438037 - AluJb SINE Alu -5 307 2 402 193 151 42 chr17 69066538 69066657 -20437896 + HAL1b LINE L1 336 467 -881 660 147 0 0 chr17 69066869 69066964 -20437589 - AluJo SINE Alu -18 294 200 590 191 18 18 chr17 69066970 69067080 -20437473 - AluJo SINE Alu -201 111 2 383 301 208 31 chr17 69067203 69067355 -20437198 + L1MC4a LINE L1 4729 4853 -1293 1946 110 0 4 chr17 69067355 69067628 -20436925 + AluSg SINE Alu 1 272 -38 1008 117 0 0 chr17 69067630 69067784 -20436769 + (TA)n Simple_repeat Simple_repeat 2 155 0 383 301 208 31 chr17 69067784 69067845 -20436708 + L1MC4a LINE L1 4853 4902 -1244 2216 98 0 0 chr17 69067845 69068140 -20436413 + AluSx SINE Alu 1 295 -17 383 301 208 31 chr17 69068140 69068211 -20436342 + L1MC4a LINE L1 4902 5068 -1078 491 269 159 8 chr17 69068604 69068849 -20435704 + L1MC4a LINE L1 5618 5899 -1909 242 130 73 0 chr17 69069264 69069312 -20435241 + AluJb SINE Alu 1 38 -262 2155 108 17 0 chr17 69069313 69069608 -20434945 + AluSx SINE Alu 1 300 -12 1559 168 7 7 chr17 69069777 69070057 -20434496 + AluJb SINE Alu 15 294 -18 317 267 59 20 chr17 69070208 69070309 -20434244 - MIR SINE MIR -128 134 30 458 304 145 40 chr17 69070389 69070837 -20433716 + L1MC/D LINE L1 4735 5229 -917 24 0 0 0 chr17 69070839 69070863 -20433690 + AT_rich Low_complexity Low_complexity 1 24 0 2206 16 0 0 chr17 69070863 69071110 -20433443 - L1PA3 LINE L1 0 6155 5909 1619 192 3 7 chr17 69071143 69071450 -20433103 - AluJb SINE Alu -6 306 1 736 311 74 35 chr17 69071456 69071863 -20432690 + L1MC/D LINE L1 5272 5692 -700 1394 140 124 27 chr17 69071883 69072186 -20432367 + AluJb SINE Alu 1 328 0 301 338 53 29 chr17 69072712 69072919 -20431634 + L2 LINE L2 2826 3037 -235 3414 201 25 36 chr17 69073183 69073359 -20431194 + L1ME1 LINE L1 4213 4389 -1757 1771 174 3 0 chr17 69073359 69073653 -20430900 + AluJb SINE Alu 1 295 -17 3414 201 25 36 chr17 69073653 69073703 -20430850 + L1ME1 LINE L1 4389 4438 -1708 1784 144 0 44 chr17 69073703 69074023 -20430530 + AluSx SINE Alu 1 306 -6 3414 201 25 36 chr17 69074023 69074086 -20430467 + L1ME1 LINE L1 4438 4500 -1646 1739 141 41 10 chr17 69074086 69074376 -20430177 + AluSx SINE Alu 1 299 -13 3414 201 25 36 chr17 69074376 69074831 -20429722 + L1ME1 LINE L1 4500 4950 -1196 1844 140 0 16 chr17 69074831 69075139 -20429414 + AluSq SINE Alu 4 306 -7 3414 201 25 36 chr17 69075139 69075298 -20429255 + L1ME1 LINE L1 4950 5109 -1037 1830 142 3 0 chr17 69075305 69075587 -20428966 + AluJo SINE Alu 5 287 -25 1410 211 104 3 chr17 69075610 69075946 -20428607 + L1ME1 LINE L1 5785 6154 -12 293 291 64 27 chr17 69076395 69076505 -20428048 - MER20B DNA MER1_type -641 142 29 321 289 141 8 chr17 69076561 69076689 -20427864 + MIR3 SINE MIR 23 167 -41 1795 162 3 7 chr17 69076749 69077057 -20427496 + AluJb SINE Alu 1 307 -5 2178 108 0 10 chr17 69079176 69079490 -20425063 - AluSq SINE Alu -2 311 1 660 233 44 74 chr17 69079947 69080389 -20424164 - LTR33A LTR ERVL -12 511 2 214 327 9 0 chr17 69081079 69081140 -20423413 + CT-rich Low_complexity Low_complexity 1 65 -43 1936 116 14 7 chr17 69081140 69081434 -20423119 - AluSc SINE Alu -13 296 1 214 327 9 0 chr17 69081434 69081479 -20423074 + CT-rich Low_complexity Low_complexity 65 108 0 940 197 28 19 chr17 69082448 69082661 -20421892 + MER20 DNA MER1_type 4 218 -1 2079 110 0 3 chr17 69082856 69083148 -20421405 + AluSc SINE Alu 1 291 -18 2141 84 10 7 chr17 69083148 69083447 -20421106 + AluY SINE Alu 1 300 -11 2445 79 0 10 chr17 69087802 69088105 -20416448 + AluY SINE Alu 5 304 -7 594 140 53 44 chr17 69090180 69090294 -20414259 + FLAM_A SINE Alu 1 115 -18 26 0 0 0 chr17 69090306 69090332 -20414221 + AT_rich Low_complexity Low_complexity 1 26 0 2350 94 3 10 chr17 69090363 69090671 -20413882 - AluSg SINE Alu -3 307 2 1011 85 20 20 chr17 69090676 69090829 -20413724 - L1PB2 LINE L1 -3 6148 5996 304 293 184 14 chr17 69090949 69091161 -20413392 - L2 LINE L2 -212 3060 2813 2450 78 3 0 chr17 69091767 69092062 -20412491 - AluSp SINE Alu -16 297 2 383 202 41 0 chr17 69092257 69092343 -20412210 - MLT1I LTR MaLR -13 428 318 2169 111 0 29 chr17 69092347 69092654 -20411899 + AluSx SINE Alu 1 298 -14 267 211 256 77 chr17 69092682 69092838 -20411715 - MLT1J2 LTR MaLR -266 184 1 2512 186 81 48 chr17 69093069 69093714 -20410839 + LTR65 LTR ERV1 4 669 0 2281 87 7 10 chr17 69093806 69094105 -20410448 - AluY SINE Alu -13 298 1 703 147 54 54 chr17 69094105 69094283 -20410270 + L1MB8 LINE L1 5336 5503 -675 853 161 91 0 chr17 69094283 69094426 -20410127 + FRAM SINE Alu 9 164 -12 3504 148 56 12 chr17 69094431 69095075 -20409478 + L1MB8 LINE L1 5507 6178 0 1283 73 0 0 chr17 69095214 69095364 -20409189 - AluSq/x SINE Alu -163 150 1 23 0 0 0 chr17 69095376 69095399 -20409154 + AT_rich Low_complexity Low_complexity 1 23 0 406 221 241 0 chr17 69095409 69095554 -20408999 - MIR SINE MIR -52 210 31 189 0 0 0 chr17 69095585 69095606 -20408947 + (TC)n Simple_repeat Simple_repeat 2 22 0 2377 67 0 7 chr17 69095606 69095905 -20408648 - AluSg SINE Alu -13 297 1 2227 115 3 0 chr17 69096517 69096813 -20407740 - AluSx SINE Alu -15 297 1 939 143 0 7 chr17 69096815 69096955 -20407598 - AluJb SINE Alu -173 139 1 2221 117 0 3 chr17 69096979 69097277 -20407276 - AluSx SINE Alu -15 297 1 27 49 0 0 chr17 69097364 69097405 -20407148 + AT_rich Low_complexity Low_complexity 1 41 0 2288 91 3 0 chr17 69097434 69097731 -20406822 - AluSp SINE Alu -15 298 1 462 288 59 24 chr17 69097959 69098129 -20406424 - MIR SINE MIR 0 262 87 2175 110 3 7 chr17 69098195 69098496 -20406057 - AluSx SINE Alu -12 300 1 24 0 0 0 chr17 69099258 69099282 -20405271 + AT_rich Low_complexity Low_complexity 1 24 0 1960 134 14 3 chr17 69099408 69099698 -20404855 - AluJb SINE Alu -19 293 1 1882 136 7 11 chr17 69100076 69100356 -20404197 + AluJb SINE Alu 1 279 -33 198 103 0 0 chr17 69100357 69100386 -20404167 + (CAGT)n Simple_repeat Simple_repeat 4 32 0 2019 139 0 13 chr17 69101277 69101578 -20402975 + AluJo SINE Alu 1 297 -15 1932 100 4 11 chr17 69102055 69102316 -20402237 + AluSx SINE Alu 39 297 -15 1037 115 148 27 chr17 69104063 69104246 -20400307 + MER3 DNA MER1_type 1 205 -4 225 302 10 31 chr17 69106478 69106574 -20397979 + MIR SINE MIR 88 181 -81 24 53 0 0 chr17 69107270 69107308 -20397245 + AT_rich Low_complexity Low_complexity 1 38 0 1889 116 94 0 chr17 69107836 69108113 -20396440 + AluSx SINE Alu 1 303 -9 238 355 47 6 chr17 69108262 69108434 -20396119 - L2 LINE L2 -205 3067 2889 24 53 0 0 chr17 69108801 69108839 -20395714 + AT_rich Low_complexity Low_complexity 1 38 0 1066 174 0 0 chr17 69109205 69109372 -20395181 + FAM SINE Alu 1 167 -8 627 207 0 130 chr17 69109507 69109715 -20394838 + MER46C DNA MER2_type 1 181 -157 228 179 0 0 chr17 69109748 69109787 -20394766 - MLT1J2 LTR MaLR -29 421 383 427 231 27 102 chr17 69110002 69110149 -20394404 + MER46C DNA MER2_type 203 338 0 406 288 79 0 chr17 69110155 69110294 -20394259 - MIR SINE MIR -12 250 101 2343 85 17 0 chr17 69110314 69110607 -20393946 - AluSg SINE Alu -12 298 1 351 100 0 0 chr17 69110610 69110660 -20393893 + MADE1 DNA Mariner 31 80 0 352 253 24 0 chr17 69110660 69110743 -20393810 - MIR SINE MIR -166 96 12 1669 122 13 0 chr17 69111450 69111679 -20392874 + AluSx SINE Alu 1 232 -80 727 99 44 213 chr17 69111809 69111955 -20392598 + L1MC2 LINE L1 6136 6305 -1480 1749 151 7 31 chr17 69111955 69112246 -20392307 + AluJb SINE Alu 1 284 -28 727 99 44 213 chr17 69112246 69112372 -20392181 + L1MC2 LINE L1 6305 7783 -2 810 208 127 30 chr17 69112652 69112888 -20391665 + MIR SINE MIR 3 261 -1 2023 130 0 3 chr17 69112959 69113243 -20391310 - AluSx SINE Alu -24 288 6 657 94 94 8 chr17 69113261 69113378 -20391175 + Charlie1 DNA MER1_type 2601 2727 -34 247 264 58 23 chr17 69113838 69113925 -20390628 - L2 LINE L2 0 3313 3224 947 112 0 0 chr17 69113925 69114050 -20390503 + AluSg/x SINE Alu 173 297 -15 401 282 184 0 chr17 69114214 69114377 -20390176 - MIR SINE MIR -3 259 67 334 259 76 38 chr17 69116141 69116299 -20388254 - L1MC5 LINE L1 -36 7925 7762 1480 101 44 4 chr17 69116660 69116888 -20387665 - L1PA11 LINE L1 -1 6173 5937 3543 153 56 30 chr17 69118388 69118507 -20386046 - L1MB7 LINE L1 0 6184 6070 2151 130 0 7 chr17 69118507 69118807 -20385746 - AluJb SINE Alu -14 298 1 3543 153 56 30 chr17 69118807 69119324 -20385229 - L1MB7 LINE L1 -114 6070 5524 2223 91 14 117 chr17 69119324 69119393 -20385160 - THE1C LTR MaLR 0 375 301 1850 117 41 28 chr17 69119393 69119683 -20384870 + AluSg SINE Alu 1 294 -16 2223 91 14 117 chr17 69119683 69120031 -20384522 - THE1C LTR MaLR -74 301 1 3543 153 56 30 chr17 69120031 69120126 -20384427 - L1MB7 LINE L1 -660 5524 5433 1511 185 40 20 chr17 69120128 69120425 -20384128 - AluJb SINE Alu -9 303 1 2054 129 0 3 chr17 69120587 69120881 -20383672 + AluSx SINE Alu 1 293 -19 1894 170 0 7 chr17 69120961 69121267 -20383286 + AluSx SINE Alu 1 304 -8 1503 85 20 0 chr17 69121426 69121625 -20382928 - THE1C LTR MaLR 0 375 173 1087 193 42 91 chr17 69121942 69122295 -20382258 + L1MB7 LINE L1 5827 6162 -22 2395 103 0 3 chr17 69123368 69123678 -20380875 - AluSq SINE Alu -4 309 1 854 169 0 15 chr17 69123678 69123814 -20380739 - AluJo SINE Alu -178 134 1 777 234 79 54 chr17 69124100 69124168 -20380385 - MER5C DNA MER1_type 0 324 259 2352 89 10 0 chr17 69124168 69124470 -20380083 - AluSg SINE Alu -5 305 1 777 234 79 54 chr17 69124470 69124717 -20379836 - MER5C DNA MER1_type -65 259 1 1697 175 0 40 chr17 69124852 69125155 -20379398 - AluJb SINE Alu -21 291 1 2282 105 3 13 chr17 69125223 69125538 -20379015 - AluSp SINE Alu -1 312 1 1930 138 50 0 chr17 69125707 69125989 -20378564 - AluSx SINE Alu -16 296 1 1427 47 6 6 chr17 69126464 69126633 -20377920 + AluY SINE Alu 1 169 -142 1314 78 24 0 chr17 69126733 69126899 -20377654 - AluY SINE Alu -141 170 1 709 183 0 0 chr17 69127790 69127905 -20376648 + FLAM_A SINE Alu 1 115 -18 230 164 16 49 chr17 69128726 69128787 -20375766 - L3 LINE CR1 -73 1504 1446 1322 192 137 19 chr17 69128993 69129300 -20375253 + MER2 DNA MER2_type 1 343 -1 200 378 98 0 chr17 69130337 69130501 -20374052 - L2 LINE L2 -204 3068 2889 1778 128 69 0 chr17 69130910 69131184 -20373369 - AluSx SINE Alu -14 298 6 277 320 104 0 chr17 69131232 69131257 -20373296 - L2 LINE L2 -1 3271 3250 2029 149 0 3 chr17 69131257 69131553 -20373000 + AluJb SINE Alu 1 295 -17 277 320 104 0 chr17 69131553 69131652 -20372901 - L2 LINE L2 -22 3250 3134 1906 166 0 13 chr17 69131738 69132046 -20372507 + AluSx SINE Alu 1 304 -8 1551 142 0 20 chr17 69132192 69132439 -20372114 + AluJb SINE Alu 71 312 0 649 329 64 33 chr17 69132501 69132994 -20371559 - L2 LINE L2 -260 3012 2511 836 219 61 35 chr17 69133006 69133078 -20371475 + Charlie1 DNA MER1_type 3 72 -2689 2473 81 0 0 chr17 69133078 69133376 -20371177 - AluSc SINE Alu -11 298 1 836 219 61 35 chr17 69133376 69133531 -20371022 + Charlie1 DNA MER1_type 72 236 -2525 589 206 59 0 chr17 69133560 69133696 -20370857 + Charlie1 DNA MER1_type 2617 2760 -1 498 179 0 32 chr17 69133725 69133820 -20370733 + FLAM_A SINE Alu 38 129 -13 2353 118 0 0 chr17 69133823 69134136 -20370417 + AluSq SINE Alu 1 313 0 776 312 43 25 chr17 69134189 69134586 -20369967 - L2 LINE L2 -882 2432 2029 504 289 43 5 chr17 69134944 69135131 -20369422 - L3 LINE CR1 -154 1423 1230 1895 146 30 13 chr17 69135451 69135753 -20368800 + AluSq SINE Alu 1 307 -6 1243 122 0 0 chr17 69135753 69135917 -20368636 + AluSg/x SINE Alu 132 295 -15 626 200 0 0 chr17 69136106 69136216 -20368337 + AluJo/FLAM SINE Alu 2 111 -201 1549 148 66 8 chr17 69136217 69136473 -20368080 - AluJo SINE Alu -41 271 1 382 267 148 22 chr17 69138922 69139103 -20365450 - MIR SINE MIR -58 204 8 684 148 0 9 chr17 69139553 69139661 -20364892 + FRAM SINE Alu 11 117 -59 268 331 6 14 chr17 69139915 69140054 -20364499 + MIR SINE MIR 34 192 -70 2038 125 3 0 chr17 69140572 69140861 -20363692 + AluSx SINE Alu 3 292 -20 539 135 260 0 chr17 69140941 69141037 -20363516 + FLAM_C SINE Alu 1 121 -12 1525 177 49 10 chr17 69141306 69141594 -20362959 - AluJb SINE Alu -13 299 1 231 192 0 0 chr17 69141614 69141666 -20362887 - L1MC4 LINE L1 -1333 6709 6658 600 174 157 0 chr17 69141744 69141859 -20362694 + FLAM_A SINE Alu 1 133 0 395 329 41 7 chr17 69142643 69142789 -20361764 + MIR SINE MIR 102 252 -10 312 55 0 55 chr17 69142898 69142953 -20361600 + FAM SINE Alu 126 177 -2 226 204 0 0 chr17 69144000 69144044 -20360509 - FLAM_C SINE Alu 0 163 120 2071 229 85 32 chr17 69144192 69144755 -20359798 - MLT1E LTR MaLR 0 593 1 1626 119 86 19 chr17 69145699 69145967 -20358586 + AluJo SINE Alu 3 288 -24 34 0 0 0 chr17 69146462 69146496 -20358057 + AT_rich Low_complexity Low_complexity 1 34 0 734 161 8 17 chr17 69146497 69146615 -20357938 - FLAM_C SINE Alu -16 117 1 444 261 26 9 chr17 69146821 69146936 -20357617 + MIR SINE MIR 30 146 -62 211 181 153 42 chr17 69147607 69147679 -20356874 - MIR SINE MIR 0 262 183 512 284 7 21 chr17 69148690 69148831 -20355722 + MIR SINE MIR 15 153 -109 2125 94 0 27 chr17 69148913 69149048 -20355505 + AluSx SINE Alu 6 143 -169 2134 98 3 28 chr17 69149048 69149365 -20355188 + AluSg SINE Alu 1 309 -1 2125 94 0 27 chr17 69149365 69149526 -20355027 + AluSx SINE Alu 143 294 -18 1069 80 13 2 chr17 69149533 69149771 -20354782 + AluSc SINE Alu 2 292 -17 181 97 97 0 chr17 69149920 69149951 -20354602 + MIR SINE MIR 159 192 -70 189 276 183 0 chr17 69151704 69151786 -20352767 + MIR SINE MIR 52 149 -59 2231 170 113 15 chr17 69154663 69155123 -20349430 + MLT1D LTR MaLR 1 505 0 201 207 35 0 chr17 69160559 69160617 -20343936 + (CAGGG)n Simple_repeat Simple_repeat 1 60 0 21 36 0 0 chr17 69161597 69161625 -20342928 + GC_rich Low_complexity Low_complexity 1 28 0 355 232 54 30 chr17 69161987 69162155 -20342398 + C-rich Low_complexity Low_complexity 6 177 0 1861 109 0 0 chr17 69163565 69163822 -20340731 + AluSg SINE Alu 9 265 -45 710 275 106 0 chr17 69167024 69167213 -20337340 - MER3 DNA MER1_type 0 209 1 273 318 91 43 chr17 69167226 69167706 -20336847 + L2 LINE L2 2552 3041 -231 1087 275 25 53 chr17 69167706 69168062 -20336491 + MER115 DNA AcHobo 35 380 -313 696 174 96 42 chr17 69168079 69168246 -20336307 + MER115 DNA AcHobo 496 671 -22 1768 149 3 42 chr17 69169388 69169551 -20335002 - AluSx SINE Alu -16 296 149 2324 74 0 23 chr17 69169551 69169861 -20334692 - AluY SINE Alu -8 303 1 1768 149 3 42 chr17 69169861 69170005 -20334548 - AluSx SINE Alu -163 149 1 1832 111 8 0 chr17 69170015 69170291 -20334262 - AluSx SINE Alu 0 312 32 1808 107 0 0 chr17 69170390 69170633 -20333920 - AluSx SINE Alu -43 269 27 485 321 87 7 chr17 69171069 69171600 -20332953 - L1ME LINE L1 -646 5516 4942 2014 123 3 16 chr17 69171850 69172160 -20332393 - AluSg SINE Alu -4 306 1 867 145 0 0 chr17 69173023 69173154 -20331399 - FLAM_C SINE Alu -7 136 6 1293 188 111 7 chr17 69173174 69173445 -20331108 - AluSg SINE Alu -11 299 1 1906 161 3 3 chr17 69173477 69173788 -20330765 + AluJb SINE Alu 1 311 -1 696 228 107 0 chr17 69174045 69174194 -20330359 - FRAM SINE Alu -9 167 3 1826 167 17 0 chr17 69174255 69174543 -20330010 + AluJb SINE Alu 1 293 -19 2303 109 0 0 chr17 69174543 69174855 -20329698 + AluSx SINE Alu 1 312 0 270 172 297 0 chr17 69174923 69174987 -20329566 + MIR SINE MIR 32 114 -148 239 343 50 0 chr17 69177116 69177215 -20327338 - MIR SINE MIR -113 149 46 799 195 0 13 chr17 69177265 69177424 -20327129 - FRAM SINE Alu 0 176 20 1308 266 99 29 chr17 69177596 69177920 -20326633 - L1ME3A LINE L1 -301 5869 5494 1980 127 7 3 chr17 69177920 69178220 -20326333 - AluSx SINE Alu -11 301 1 1308 266 99 29 chr17 69178220 69178410 -20326143 - L1ME3A LINE L1 -676 5494 5319 615 200 100 13 chr17 69178485 69178635 -20325918 - MER103 DNA DNA -2 164 2 444 315 103 14 chr17 69178715 69178928 -20325625 + MIR SINE MIR 20 251 -11 2041 133 0 22 chr17 69179122 69179300 -20325253 - AluSx SINE Alu -2 310 130 207 0 0 0 chr17 69179300 69179323 -20325230 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2019 112 14 0 chr17 69179324 69179601 -20324952 - AluSx SINE Alu -31 281 1 2041 133 0 22 chr17 69179601 69179737 -20324816 - AluSx SINE Alu -181 131 1 1730 150 45 0 chr17 69179760 69180047 -20324506 - AluJo SINE Alu -12 300 1 588 300 155 44 chr17 69180398 69180876 -20323677 + L2 LINE L2 2772 3294 -19 2293 88 0 0 chr17 69181311 69181607 -20322946 - AluSx SINE Alu -15 297 2 962 104 0 8 chr17 69181843 69181977 -20322576 - FRAM SINE Alu -9 167 35 1814 161 10 0 chr17 69181998 69182296 -20322257 - AluJo SINE Alu -11 301 1 2113 124 0 6 chr17 69182477 69182791 -20321762 - AluSx SINE Alu 0 312 1 1782 125 7 30 chr17 69183797 69184092 -20320461 - AluSg1 SINE Alu -21 288 1 1732 171 7 3 chr17 69184228 69184533 -20320020 + AluJb SINE Alu 6 311 -1 233 358 121 35 chr17 69184710 69184883 -20319670 - L2 LINE L2 -52 3220 3033 1116 158 0 0 chr17 69185203 69185386 -20319167 + AluSg/x SINE Alu 127 309 -1 2197 110 0 0 chr17 69185796 69186095 -20318458 - AluSx SINE Alu -13 299 1 1393 160 66 7 chr17 69186307 69186595 -20317958 - AluSg SINE Alu -5 305 1 238 302 60 0 chr17 69186690 69186806 -20317747 + MIR SINE MIR 140 262 0 504 164 25 90 chr17 69187008 69187130 -20317423 + MER81 DNA DNA 1 114 0 1893 123 65 10 chr17 69187501 69187793 -20316760 + AluSx SINE Alu 1 308 -4 1632 152 45 7 chr17 69187803 69188093 -20316460 - L1MB3 LINE L1 -2 6181 5881 626 272 12 18 chr17 69188241 69188410 -20316143 + MER5B DNA MER1_type 1 168 -10 349 374 62 4 chr17 69188833 69189060 -20315493 + L3 LINE CR1 1336 1575 -2 345 305 96 11 chr17 69189817 69190004 -20314549 + Charlie8 DNA MER1_type 63 265 -2152 2407 74 6 10 chr17 69191514 69191825 -20312728 + AluY SINE Alu 2 311 0 1731 154 8 4 chr17 69191835 69192101 -20312452 + AluJb SINE Alu 1 267 -45 2435 84 0 3 chr17 69192112 69192420 -20312133 + AluSc SINE Alu 1 307 -2 2261 112 16 0 chr17 69192457 69192761 -20311792 + AluSx SINE Alu 1 309 -3 2303 105 0 13 chr17 69195148 69195463 -20309090 - AluSx SINE Alu -1 311 1 1722 91 124 19 chr17 69195467 69195732 -20308821 - AluSg SINE Alu -17 293 1 265 56 0 0 chr17 69196030 69196066 -20308487 - Alu SINE Alu -227 73 38 1530 85 0 24 chr17 69196066 69196277 -20308276 + AluSg/x SINE Alu 100 305 -5 2235 92 0 52 chr17 69196345 69196672 -20307881 - AluSx SINE Alu -2 310 1 2410 91 0 3 chr17 69196681 69196990 -20307563 - AluY SINE Alu -3 308 1 1819 122 59 28 chr17 69199637 69199924 -20304629 + AluSx SINE Alu 1 296 -16 783 159 8 0 chr17 69200065 69200197 -20304356 - FLAM_C SINE Alu -4 139 7 351 132 38 0 chr17 69200281 69200334 -20304219 - MER66A LTR ERV1 -140 338 284 1049 242 58 78 chr17 69200339 69200523 -20304030 - HAL1 LINE L1 -228 2279 2093 2261 110 0 19 chr17 69200523 69200841 -20303712 + AluSx SINE Alu 1 312 0 2356 102 7 0 chr17 69200850 69201154 -20303399 - AluSq SINE Alu -5 308 3 1049 242 58 78 chr17 69201154 69201409 -20303144 - HAL1 LINE L1 -422 2085 1839 1049 177 226 12 chr17 69201418 69201579 -20302974 - AluSg1 SINE Alu -14 295 170 1948 146 3 13 chr17 69201579 69201881 -20302672 - AluSx SINE Alu -13 299 1 1049 177 226 12 chr17 69201881 69201962 -20302591 - AluSg1 SINE Alu -139 170 1 2264 83 7 3 chr17 69201973 69202263 -20302290 - AluSc SINE Alu -18 291 1 2401 90 0 10 chr17 69202272 69202584 -20301969 - AluSc SINE Alu 0 309 1 2374 97 0 13 chr17 69202877 69203188 -20301365 - AluY SINE Alu -4 307 1 971 128 0 0 chr17 69203192 69203325 -20301228 - AluSq/x SINE Alu -179 133 1 1394 179 62 52 chr17 69203347 69203534 -20301019 - AluJb SINE Alu -19 293 100 1697 169 4 0 chr17 69203534 69203800 -20300753 + AluJb SINE Alu 1 267 -45 1394 179 62 52 chr17 69203800 69203902 -20300651 - AluJb SINE Alu -212 100 1 1820 115 0 27 chr17 69203911 69204172 -20300381 - AluSx SINE Alu -20 292 39 216 255 10 41 chr17 69204374 69204472 -20300081 + T-rich Low_complexity Low_complexity 3 97 0 2968 167 60 8 chr17 69204577 69205109 -20299444 + MER68 LTR ERV1 3 562 0 2081 119 24 3 chr17 69205381 69205676 -20298877 + AluSx SINE Alu 1 301 -11 2004 121 14 10 chr17 69205896 69206185 -20298368 + AluSx SINE Alu 1 290 -22 195 386 62 0 chr17 69206305 69206450 -20298103 + MIR SINE MIR 1 154 -108 2195 102 16 16 chr17 69206952 69207257 -20297296 - AluSx SINE Alu -7 305 1 2159 125 0 0 chr17 69207366 69207661 -20296892 + AluSx SINE Alu 1 295 -17 2435 106 0 0 chr17 69207987 69208298 -20296255 + AluSx SINE Alu 1 311 -1 359 301 30 30 chr17 69208481 69208647 -20295906 + HAL1b LINE L1 746 911 -437 2458 136 42 0 chr17 69208748 69209410 -20295143 + AluSg SINE Alu 1 310 0 1387 167 105 4 chr17 69209597 69209882 -20294671 + AluSx SINE Alu 1 311 0 2384 61 41 7 chr17 69209890 69210185 -20294368 + AluY SINE Alu 1 305 -6 557 108 0 0 chr17 69210415 69210489 -20294064 - AluJ/FLAM SINE Alu -215 97 24 502 135 27 60 chr17 69210682 69210867 -20293686 + (TA)n Simple_repeat Simple_repeat 2 180 0 521 195 0 0 chr17 69211000 69211087 -20293466 - AluJ/FLAM SINE Alu -224 88 2 432 97 0 0 chr17 69211107 69211169 -20293384 + (TA)n Simple_repeat Simple_repeat 1 62 0 330 24 0 0 chr17 69211169 69211205 -20293348 + (CA)n Simple_repeat Simple_repeat 1 36 0 2185 114 0 9 chr17 69211249 69211565 -20292988 + AluSq SINE Alu 1 313 0 440 227 281 11 chr17 69211579 69211764 -20292789 - MIR SINE MIR -10 252 18 2478 64 0 6 chr17 69213668 69213980 -20290573 + AluY SINE Alu 1 310 -1 2301 109 0 3 chr17 69214052 69214355 -20290198 - AluSx SINE Alu -10 302 1 2408 89 0 3 chr17 69214678 69214980 -20289573 - AluSx SINE Alu -11 301 1 2241 115 0 0 chr17 69215216 69215511 -20289042 + AluY SINE Alu 1 295 -16 231 301 21 11 chr17 69215840 69215933 -20288620 - MIR SINE MIR -97 111 18 24 77 0 0 chr17 69216458 69216510 -20288043 + AT_rich Low_complexity Low_complexity 1 52 0 26 0 0 0 chr17 69217604 69217630 -20286923 + AT_rich Low_complexity Low_complexity 1 26 0 2178 133 0 0 chr17 69218873 69219175 -20285378 - AluSx SINE Alu -10 302 1 1513 117 0 0 chr17 69219236 69219433 -20285120 - AluSx SINE Alu -115 197 1 685 106 0 29 chr17 69219442 69219546 -20285007 - AluSp/q SINE Alu -13 300 200 422 151 0 27 chr17 69219710 69219783 -20284770 + AluSq/x SINE Alu 45 115 -197 2037 109 7 7 chr17 69219784 69220058 -20284495 + AluSx SINE Alu 35 308 -4 1979 104 48 4 chr17 69220145 69220441 -20284112 + AluSx SINE Alu 1 308 0 2355 86 10 0 chr17 69220492 69220783 -20283770 + AluSc SINE Alu 1 294 -15 1030 147 6 6 chr17 69220829 69220992 -20283561 + FRAM SINE Alu 1 163 -3 2320 74 0 14 chr17 69221611 69221907 -20282646 - AluSg SINE Alu -18 292 1 1683 173 0 19 chr17 69221934 69222200 -20282353 - AluJo SINE Alu -51 261 1 1298 90 0 0 chr17 69222250 69222416 -20282137 + AluSg/x SINE Alu 147 312 0 25 0 0 0 chr17 69223581 69223606 -20280947 + AT_rich Low_complexity Low_complexity 1 25 0 263 238 238 25 chr17 69223963 69224085 -20280468 - L3 LINE CR1 -26 1551 1404 2373 101 0 0 chr17 69224850 69225156 -20279397 + AluSg SINE Alu 5 310 0 1876 139 19 32 chr17 69225622 69225931 -20278622 + AluSx SINE Alu 6 310 -2 1824 175 14 0 chr17 69225993 69226285 -20278268 - AluJo SINE Alu -14 298 3 954 125 0 14 chr17 69226358 69226502 -20278051 + FLAM_C SINE Alu 1 142 -1 640 183 8 16 chr17 69226769 69226895 -20277658 + FAM SINE Alu 45 169 -16 882 233 167 28 chr17 69227636 69228001 -20276552 + MLT1E3 LTR MaLR 1 379 -245 415 216 206 0 chr17 69227997 69228099 -20276454 + FLAM_A SINE Alu 9 131 -2 * 1788 147 19 44 chr17 69228099 69228418 -20276135 + AluJo SINE Alu 1 311 -1 1136 191 73 4 chr17 69228418 69228664 -20275889 + MLT1E3 LTR MaLR 362 624 0 1901 225 127 75 chr17 69228742 69229412 -20275141 + MER21B LTR ERV1 11 715 -148 716 191 0 0 chr17 69229412 69229543 -20275010 + FLAM_C SINE Alu 1 131 -2 25 51 0 0 chr17 69229543 69229582 -20274971 + AT_rich Low_complexity Low_complexity 1 39 0 2366 106 0 0 chr17 69230227 69230529 -20274024 + AluSx SINE Alu 1 302 -10 588 14 0 0 chr17 69230529 69230598 -20273955 + (TA)n Simple_repeat Simple_repeat 2 70 0 2389 83 3 3 chr17 69230804 69231106 -20273447 + AluSc SINE Alu 1 302 -7 2234 125 7 0 chr17 69231583 69231887 -20272666 + AluSx SINE Alu 7 312 0 2234 89 0 54 chr17 69232420 69232735 -20271818 + AluSg SINE Alu 1 298 -12 248 330 108 25 chr17 69233351 69233554 -20270999 + MIR SINE MIR 1 220 -42 1567 197 14 17 chr17 69233948 69234243 -20270310 - AluJo SINE Alu -18 294 1 1879 181 0 7 chr17 69234261 69234564 -20269989 + AluJb SINE Alu 1 301 -11 2315 84 0 0 chr17 69234564 69234848 -20269705 + AluSc SINE Alu 1 284 -25 40 0 0 0 chr17 69234851 69234891 -20269662 + AT_rich Low_complexity Low_complexity 1 40 0 1277 137 137 16 chr17 69236015 69236141 -20268412 + L1MA9 LINE L1 6022 6131 -181 315 0 0 0 chr17 69236141 69236176 -20268377 + (CA)n Simple_repeat Simple_repeat 1 35 0 1277 137 137 16 chr17 69236176 69236304 -20268249 + L1MA9 LINE L1 6131 6307 -5 2325 112 3 0 chr17 69236355 69236660 -20267893 - AluSx SINE Alu -6 306 1 240 337 12 12 chr17 69237348 69237431 -20267122 + MIR SINE MIR 21 103 -105 2325 101 0 3 chr17 69237448 69237745 -20266808 - AluSq SINE Alu -17 296 1 727 219 94 26 chr17 69237980 69238213 -20266340 - MIR SINE MIR -1 261 13 510 194 119 22 chr17 69238650 69238784 -20265769 - MER58C DNA MER1_type -10 205 59 1512 199 10 20 chr17 69239434 69239740 -20264813 + AluJb SINE Alu 9 311 -1 1113 150 13 81 chr17 69239770 69239836 -20264717 + AluJo SINE Alu 86 155 -157 2009 119 11 11 chr17 69239836 69240122 -20264431 + AluSx SINE Alu 15 300 -12 1113 150 13 81 chr17 69240122 69240289 -20264264 + AluJo SINE Alu 155 303 -9 2442 96 3 0 chr17 69240352 69240664 -20263889 + AluSq SINE Alu 1 313 0 1470 104 90 0 chr17 69240688 69240899 -20263654 + MER30 DNA MER1_type 1 230 0 2208 97 3 41 chr17 69240972 69241291 -20263262 - AluSx SINE Alu -3 309 3 2277 109 6 6 chr17 69241724 69242036 -20262517 + AluSx SINE Alu 1 312 0 348 83 0 0 chr17 69242036 69242084 -20262469 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 984 148 15 96 chr17 69242168 69242456 -20262097 - MER2 DNA MER2_type 0 345 2 2352 113 0 0 chr17 69242820 69243130 -20261423 + AluSx SINE Alu 1 310 -2 306 271 76 17 chr17 69243133 69243251 -20261302 + MIR SINE MIR 62 186 -76 2651 50 0 0 chr17 69243271 69243573 -20260980 - AluY SINE Alu -9 302 1 357 162 0 0 chr17 69245222 69245290 -20259263 + (CGG)n Simple_repeat Simple_repeat 2 69 0 867 282 113 13 chr17 69246307 69246859 -20257694 - L2 LINE L2 0 3313 2700 403 233 40 53 chr17 69247589 69247654 -20256899 - MIR SINE MIR -50 212 148 911 129 0 0 chr17 69247654 69247786 -20256767 - FLAM_C SINE Alu -1 132 1 403 233 40 53 chr17 69247786 69247870 -20256683 - MIR SINE MIR -114 148 65 1786 159 17 10 chr17 69247933 69248229 -20256324 - AluJo SINE Alu -14 298 1 2486 80 0 3 chr17 69248457 69248768 -20255785 - AluY SINE Alu -1 310 1 435 231 219 16 chr17 69249387 69249629 -20254924 + L2 LINE L2 3021 3311 -2 1976 102 0 4 chr17 69249665 69249921 -20254632 - AluSc SINE Alu -16 293 39 21 0 0 0 chr17 69250174 69250195 -20254358 + AT_rich Low_complexity Low_complexity 1 21 0 1783 178 0 7 chr17 69250271 69250580 -20253973 - AluJo SINE Alu -1 311 5 853 162 13 7 chr17 69250606 69250760 -20253793 - L1MB3 LINE L1 -102 6081 5927 818 149 45 0 chr17 69250761 69250895 -20253658 - FLAM_C SINE Alu 0 143 4 2442 73 10 0 chr17 69251036 69251337 -20253216 + AluSp SINE Alu 2 305 -8 297 235 196 0 chr17 69251499 69251601 -20252952 - L2 LINE L2 0 3313 3192 2340 96 0 0 chr17 69252235 69252536 -20252017 - AluY SINE Alu -9 302 2 2574 66 0 0 chr17 69252749 69253053 -20251500 + AluY SINE Alu 1 304 -7 1802 109 4 8 chr17 69253068 69253316 -20251237 + AluSg SINE Alu 51 297 -13 232 310 60 20 chr17 69254210 69254310 -20250243 + L2 LINE L2 3149 3252 -20 1940 162 0 3 chr17 69254805 69255113 -20249440 + AluSx SINE Alu 3 309 -3 1505 164 45 35 chr17 69255515 69255801 -20248752 + AluJo SINE Alu 1 289 -23 251 309 53 0 chr17 69255831 69255925 -20248628 + L1ME4a LINE L1 5615 5713 -408 324 304 172 0 chr17 69255962 69256166 -20248387 + L1ME4a LINE L1 5835 6073 -48 1879 134 70 3 chr17 69256209 69256493 -20248060 + AluSx SINE Alu 1 303 -9 772 167 0 36 chr17 69256502 69256640 -20247913 + FLAM_C SINE Alu 1 133 0 1014 161 0 0 chr17 69257258 69257407 -20247146 - FAM SINE Alu -8 41 1 183 42 0 0 chr17 69257435 69257459 -20247094 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 760 211 6 6 chr17 69257479 69257635 -20246918 - AluJo SINE Alu -44 268 113 22 0 0 0 chr17 69257638 69257660 -20246893 + AT_rich Low_complexity Low_complexity 1 22 0 2334 95 0 0 chr17 69257703 69257998 -20246555 - AluSg SINE Alu -15 295 1 2147 103 7 17 chr17 69258579 69258880 -20245673 + AluSx SINE Alu 1 298 -14 2087 141 3 0 chr17 69258928 69259227 -20245326 - AluSx SINE Alu -12 300 1 2198 98 14 7 chr17 69259333 69259628 -20244925 - AluY SINE Alu -12 299 3 1828 134 3 41 chr17 69259899 69260092 -20244461 - AluJb SINE Alu 0 318 140 2221 126 0 0 chr17 69260092 69260401 -20244152 - AluSx SINE Alu -3 309 1 1828 134 3 41 chr17 69260401 69260535 -20244018 - AluJb SINE Alu -178 140 2 2356 109 3 0 chr17 69260583 69260895 -20243658 - AluSp SINE Alu 0 313 1 643 218 8 0 chr17 69261062 69261195 -20243358 + FRAM SINE Alu 39 172 -4 213 225 38 25 chr17 69261200 69261280 -20243273 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 1970 113 6 61 chr17 69261365 69261503 -20243050 + AluSx SINE Alu 1 145 -167 2193 107 3 0 chr17 69261503 69261793 -20242760 + AluSx SINE Alu 3 293 -19 1970 113 6 61 chr17 69261793 69261965 -20242588 + AluSx SINE Alu 145 294 -18 22 0 0 0 chr17 69262125 69262147 -20242406 + AT_rich Low_complexity Low_complexity 1 22 0 2129 136 10 0 chr17 69262324 69262633 -20241920 - AluSx SINE Alu 0 312 1 2032 119 10 3 chr17 69262787 69263082 -20241471 + AluSq SINE Alu 1 297 -16 362 196 152 122 chr17 69264116 69264276 -20240277 - L1MC5 LINE L1 -30 7931 7756 1799 197 0 7 chr17 69264276 69264586 -20239967 - AluJo SINE Alu 0 312 5 362 196 152 122 chr17 69264586 69264721 -20239832 - L1MC5 LINE L1 -205 7756 7627 258 320 20 27 chr17 69264829 69264879 -20239674 - MIR SINE MIR -65 197 148 216 0 0 0 chr17 69264879 69264903 -20239650 + (TA)n Simple_repeat Simple_repeat 1 24 0 258 320 20 27 chr17 69264903 69265002 -20239551 - MIR SINE MIR -114 148 49 405 191 15 23 chr17 69265284 69265629 -20238924 + AluJo SINE Alu 1 301 -1 237 143 0 0 chr17 69265631 69265673 -20238880 + Alu SINE Alu 257 298 -4 2157 95 33 33 chr17 69265676 69265981 -20238572 + AluSx SINE Alu 1 305 -7 401 247 148 101 chr17 69266093 69266379 -20238174 + Charlie8 DNA MER1_type 35 139 -202 1294 169 124 48 chr17 69266379 69266652 -20237901 - AluJo SINE Alu -18 294 1 401 247 148 101 chr17 69266652 69266790 -20237763 + Charlie8 DNA MER1_type 139 269 -72 225 323 0 0 chr17 69266832 69266894 -20237659 - MIR SINE MIR -155 107 46 2134 101 3 42 chr17 69267330 69267638 -20236915 - AluSp SINE Alu -17 296 1 1971 81 8 8 chr17 69268135 69268396 -20236157 + AluSp SINE Alu 44 304 -9 848 185 88 29 chr17 69268473 69268678 -20235875 - MER20 DNA MER1_type 0 219 3 636 174 41 8 chr17 69269524 69269645 -20234908 - MER8 DNA MER2_type -1 238 114 652 94 29 47 chr17 69271899 69272069 -20232484 + CT-rich Low_complexity Low_complexity 2 168 0 1849 137 36 20 chr17 69272071 69272377 -20232176 - AluSx SINE Alu -1 311 1 607 221 0 0 chr17 69272436 69272540 -20232013 - FLAM_A SINE Alu -38 104 1 664 151 0 0 chr17 69272545 69272651 -20231902 - AluSx SINE Alu -5 305 200 977 127 0 0 chr17 69272651 69272777 -20231776 - AluSx SINE Alu -186 126 1 3648 175 105 119 chr17 69272984 69273509 -20231044 + Charlie1a DNA MER1_type 1 532 -2229 761 167 0 0 chr17 69273509 69273623 -20230930 + AluJb SINE Alu 2 115 -197 3648 175 105 119 chr17 69273623 69273651 -20230902 + Charlie1a DNA MER1_type 532 559 -2202 2304 108 3 0 chr17 69273651 69273948 -20230605 + AluSp SINE Alu 1 298 -15 3648 175 105 119 chr17 69273948 69274329 -20230224 + Charlie1a DNA MER1_type 559 944 -1817 1915 118 79 4 chr17 69274329 69274609 -20229944 + AluSx SINE Alu 1 301 -11 3648 175 105 119 chr17 69274609 69274659 -20229894 + Charlie1a DNA MER1_type 944 993 -1768 2299 105 0 10 chr17 69274659 69274972 -20229581 - AluSx SINE Alu -2 310 1 3648 175 105 119 chr17 69274972 69275141 -20229412 + Charlie1a DNA MER1_type 993 1252 -203 861 151 0 0 chr17 69275187 69275313 -20229240 + FLAM_A SINE Alu 2 127 -6 934 161 12 19 chr17 69275722 69275883 -20228670 + AluSg/x SINE Alu 137 296 -16 2142 114 10 3 chr17 69278155 69278461 -20226092 - AluSx SINE Alu -4 308 1 602 110 60 0 chr17 69279011 69279111 -20225442 - L1MB3 LINE L1 0 6183 6078 2242 110 13 7 chr17 69279186 69279496 -20225057 - AluSx SINE Alu 0 312 1 1635 129 58 58 chr17 69281118 69281413 -20223140 - AluSq SINE Alu -18 295 1 258 333 55 27 chr17 69281720 69281903 -20222650 - MIR3 SINE MIR -19 189 2 231 222 83 0 chr17 69282342 69282414 -20222139 + L1MC5 LINE L1 7798 7875 -86 2276 96 3 0 chr17 69283765 69284058 -20220495 + AluSx SINE Alu 1 294 -18 200 191 118 15 chr17 69284658 69284726 -20219827 - L3 LINE CR1 -171 1406 1332 2268 94 0 20 chr17 69284870 69285168 -20219385 - AluSx SINE Alu -20 292 1 2205 109 7 3 chr17 69285700 69286003 -20218550 - AluSx SINE Alu 0 312 9 466 141 256 0 chr17 69286934 69287055 -20217498 + MER5A DNA MER1_type 1 152 -37 362 285 215 14 chr17 69287355 69287569 -20216984 - MIR SINE MIR 0 262 6 262 266 96 0 chr17 69287633 69287727 -20216826 - L1ME LINE L1 -420 5701 5599 314 225 197 28 chr17 69288304 69288446 -20216107 - MER46C DNA MER2_type -157 181 16 2013 113 39 0 chr17 69291521 69291804 -20212749 + AluSx SINE Alu 1 294 -18 362 187 252 0 chr17 69292201 69292308 -20212245 + MER5B DNA MER1_type 41 174 -4 187 314 20 0 chr17 69293310 69293361 -20211192 - MIR SINE MIR -64 144 93 981 186 0 0 chr17 69293666 69293822 -20210731 + FRAM SINE Alu 1 156 -20 505 257 118 51 chr17 69293826 69294063 -20210490 - MIR SINE MIR -6 256 4 2629 53 0 0 chr17 69294336 69294635 -20209918 + AluY SINE Alu 1 299 -12 231 36 0 0 chr17 69295163 69295191 -20209362 + (TCC)n Simple_repeat Simple_repeat 3 30 0 419 271 25 25 chr17 69296715 69296833 -20207720 - L2 LINE L2 -3 3310 3193 266 130 74 19 chr17 69299728 69299782 -20204771 + Tigger2 DNA MER2_type 2554 2610 -108 309 172 276 11 chr17 69299847 69299934 -20204619 + Tigger2 DNA MER2_type 2599 2708 -10 213 309 131 12 chr17 69301701 69301785 -20202768 + L2 LINE L2 3174 3267 -5 269 161 54 0 chr17 69306018 69306074 -20198479 - MER91B DNA MER1_type -54 136 78 1499 149 4 4 chr17 69306153 69306381 -20198172 - AluJo SINE Alu -19 293 66 249 268 120 28 chr17 69306669 69306757 -20197796 - L2 LINE L2 -7 3265 3158 2121 119 3 7 chr17 69306757 69307051 -20197502 - AluSx SINE Alu -19 293 1 249 268 120 28 chr17 69307051 69307104 -20197449 - L2 LINE L2 -114 3158 3111 2012 105 84 3 chr17 69307264 69307550 -20197003 + AluSg SINE Alu 1 309 -1 448 283 49 20 chr17 69307606 69307850 -20196703 + MER112 DNA MER1_type 2 252 -4 251 28 28 0 chr17 69310593 69310629 -20193924 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 2378 75 0 10 chr17 69310869 69311163 -20193390 + AluSg1 SINE Alu 1 291 -18 1708 154 0 18 chr17 69311224 69311496 -20193057 - AluJo SINE Alu -45 267 1 28 71 0 0 chr17 69313488 69313544 -20191009 + GC_rich Low_complexity Low_complexity 1 56 0 2424 72 10 3 chr17 69314374 69314679 -20189874 + AluSq SINE Alu 1 307 -6 284 238 79 50 chr17 69315136 69315237 -20189316 - MER5A DNA MER1_type -79 110 7 2191 126 0 0 chr17 69315841 69316135 -20188418 + AluSx SINE Alu 1 294 -18 537 330 46 30 chr17 69316150 69316513 -20188040 + L2 LINE L2 2703 3227 -86 23 54 0 0 chr17 69316518 69316555 -20187998 + AT_rich Low_complexity Low_complexity 1 37 0 988 183 99 10 chr17 69316584 69316652 -20187901 - AluJo SINE Alu -92 220 159 2031 160 21 24 chr17 69316652 69317070 -20187483 - L1MB5 LINE L1 0 6174 5758 988 183 99 10 chr17 69317070 69317203 -20187350 - AluJo SINE Alu -153 159 1 518 208 67 0 chr17 69317204 69317324 -20187229 - L1MB5 LINE L1 -405 5769 5642 275 175 32 32 chr17 69317577 69317640 -20186913 - MIR SINE MIR -48 214 152 891 172 0 56 chr17 69317657 69317837 -20186716 - FRAM SINE Alu -7 169 1 1641 163 59 3 chr17 69318039 69318327 -20186226 + AluJo SINE Alu 1 304 -8 215 222 0 0 chr17 69319080 69319125 -20185428 - L2 LINE L2 -7 3306 3262 298 69 0 0 chr17 69319459 69319507 -20185046 + AluY SINE Alu 218 254 -47 2059 94 76 0 chr17 69319541 69319817 -20184736 + AluSx SINE Alu 1 297 -15 307 315 112 26 chr17 69320748 69321088 -20183465 - L2 LINE L2 -51 3262 2894 2411 100 3 0 chr17 69321088 69321398 -20183155 + AluSq SINE Alu 1 311 -2 666 108 17 8 chr17 69321467 69321587 -20182966 + (GGGA)n Simple_repeat Simple_repeat 3 123 0 2262 85 46 0 chr17 69321776 69322058 -20182495 - AluSq SINE Alu -18 295 1 21 0 0 0 chr17 69322113 69322134 -20182419 + AT_rich Low_complexity Low_complexity 1 21 0 2131 102 14 7 chr17 69322510 69322804 -20181749 + AluY SINE Alu 1 296 -15 930 211 0 0 chr17 69322845 69323011 -20181542 + FRAM SINE Alu 1 166 0 2528 63 3 0 chr17 69323015 69323314 -20181239 + AluY SINE Alu 1 300 -11 1260 258 99 24 chr17 69323491 69323955 -20180598 + LTR45 LTR ERV1 1 454 -35 225 0 0 0 chr17 69324008 69324033 -20180520 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1669 177 3 14 chr17 69324033 69324316 -20180237 - AluJo SINE Alu -32 280 1 317 281 144 14 chr17 69324320 69324361 -20180192 - MARNA DNA Mariner -373 213 179 1816 171 0 32 chr17 69324361 69324676 -20179877 + AluJo SINE Alu 1 305 -7 317 281 144 14 chr17 69324676 69324780 -20179773 - MARNA DNA Mariner -407 179 49 243 379 64 16 chr17 69324889 69325140 -20179413 - L2 LINE L2 -19 3294 3032 2341 102 3 3 chr17 69325157 69325462 -20179091 - AluSx SINE Alu -7 305 1 2203 87 33 0 chr17 69326508 69326817 -20177736 + AluSq SINE Alu 1 318 0 267 357 33 33 chr17 69326990 69327172 -20177381 - MER5A DNA MER1_type 0 189 8 2302 99 7 3 chr17 69327409 69327712 -20176841 - AluSp SINE Alu -9 304 1 2542 73 0 0 chr17 69327859 69328159 -20176394 - AluSc SINE Alu -9 300 1 2116 115 10 14 chr17 69328612 69328908 -20175645 - AluSx SINE Alu -7 305 11 1821 169 3 14 chr17 69329097 69329393 -20175160 + AluJo SINE Alu 3 295 -17 2161 96 11 0 chr17 69329658 69329958 -20174595 - AluSx SINE Alu 0 303 1 2260 124 0 6 chr17 69332324 69332638 -20171915 + AluSx SINE Alu 1 312 0 2210 117 3 13 chr17 69332776 69333083 -20171470 + AluSc SINE Alu 1 304 -5 2257 128 0 3 chr17 69334120 69334432 -20170121 - AluSx SINE Alu -1 311 1 2133 108 11 0 chr17 69335402 69335711 -20168842 - AluY SINE Alu 0 312 1 2167 111 3 3 chr17 69335752 69336049 -20168504 - AluSg1 SINE Alu -12 297 1 1911 164 6 3 chr17 69336181 69336492 -20168061 + AluJb SINE Alu 1 312 0 2288 84 13 3 chr17 69336661 69336969 -20167584 + AluY SINE Alu 1 311 0 211 288 125 103 chr17 69336987 69337171 -20167382 - L2 LINE L2 -52 3220 3033 1198 144 6 0 chr17 69337493 69337674 -20166879 + AluSg/x SINE Alu 129 310 -2 2356 108 0 0 chr17 69338107 69338413 -20166140 - AluSx SINE Alu 0 312 7 1679 147 67 0 chr17 69338628 69338913 -20165640 - AluSg SINE Alu -5 305 2 431 180 25 90 chr17 69339327 69339449 -20165104 + MER81 DNA DNA 1 114 0 1768 128 85 11 chr17 69339821 69340103 -20164450 + AluSx SINE Alu 1 303 -9 1466 155 45 7 chr17 69340113 69340403 -20164150 - L1MB3 LINE L1 -2 6181 5881 603 278 12 18 chr17 69340551 69340720 -20163833 + MER5B DNA MER1_type 1 168 -10 402 370 62 4 chr17 69341144 69341371 -20163182 + L3 LINE CR1 1336 1575 -2 359 305 96 11 chr17 69342128 69342315 -20162238 + Charlie8 DNA MER1_type 74 276 -2141 1408 56 5 30 chr17 69345445 69345643 -20158910 + L1PA3 LINE L1 5963 6155 0 289 239 76 22 chr17 69345837 69345929 -20158624 - MIR SINE MIR -100 162 66 1656 167 22 4 chr17 69345981 69346299 -20158254 + AluSx SINE Alu 1 323 0 2063 141 6 6 chr17 69346360 69346415 -20158138 - AluSx SINE Alu 0 346 292 966 130 17 6 chr17 69346415 69346592 -20157961 + CT-rich Low_complexity Low_complexity 2 180 0 2063 141 6 6 chr17 69346592 69346882 -20157671 - AluSx SINE Alu -53 293 1 1995 134 0 17 chr17 69348303 69348602 -20155951 + AluSg1 SINE Alu 1 294 -15 201 250 0 73 chr17 69349190 69349258 -20155295 - MIR SINE MIR -76 132 70 2327 76 10 7 chr17 69349983 69350284 -20154269 - AluY SINE Alu -9 302 1 200 216 0 0 chr17 69350303 69350340 -20154213 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 357 292 54 58 chr17 69350342 69350582 -20153971 - L2 LINE L2 0 3313 3075 1973 106 0 0 chr17 69350775 69351030 -20153523 + AluSx SINE Alu 5 259 -53 407 99 0 14 chr17 69353395 69353466 -20151087 + (TGGGGG)n Simple_repeat Simple_repeat 3 72 0 297 188 0 31 chr17 69353820 69353884 -20150669 - MIR SINE MIR -100 162 101 2285 119 0 0 chr17 69353963 69354265 -20150288 + AluSx SINE Alu 1 302 -10 1907 157 3 10 chr17 69354323 69354628 -20149925 - AluSx SINE Alu -9 303 1 1960 139 10 16 chr17 69356061 69356371 -20148182 + AluSx SINE Alu 1 308 -4 1974 126 16 10 chr17 69357545 69357855 -20146698 - AluSq SINE Alu -1 312 1 195 42 0 0 chr17 69357966 69357990 -20146563 + (A)n Simple_repeat Simple_repeat 1 24 0 1889 129 7 30 chr17 69358866 69359161 -20145392 - AluSg1 SINE Alu -21 288 1 1658 172 10 16 chr17 69359297 69359605 -20144948 + AluJb SINE Alu 6 311 -1 233 363 115 33 chr17 69359782 69359964 -20144589 - L2 LINE L2 -52 3220 3024 1143 170 0 0 chr17 69360273 69360455 -20144098 + AluSg/x SINE Alu 127 308 -2 2366 119 0 0 chr17 69360893 69361205 -20143348 - AluSx SINE Alu 0 312 1 1497 159 72 4 chr17 69361426 69361702 -20142851 - AluSg SINE Alu -15 295 1 201 328 34 0 chr17 69361797 69361916 -20142637 + MIR SINE MIR 140 262 0 401 148 57 123 chr17 69362115 69362237 -20142316 + MER81 DNA DNA 1 114 0 1942 132 61 10 chr17 69362609 69362904 -20141649 + AluSx SINE Alu 1 310 -2 1382 159 52 14 chr17 69362918 69363207 -20141346 - L1MB3 LINE L1 -2 6181 5882 599 261 12 19 chr17 69363366 69363527 -20141026 + MER5B DNA MER1_type 1 160 -18 419 370 62 4 chr17 69363962 69364189 -20140364 + L3 LINE CR1 1336 1575 -2 368 305 96 11 chr17 69364946 69365133 -20139420 + Charlie8 DNA MER1_type 74 276 -2141 193 302 47 23 chr17 69368225 69368311 -20136242 - MIR3 SINE MIR -12 196 109 285 278 88 0 chr17 69368430 69368547 -20136006 - MIR SINE MIR -58 150 43 1785 162 11 0 chr17 69368578 69368898 -20135655 + AluSx SINE Alu 1 323 0 1927 136 7 7 chr17 69368955 69369393 -20135160 - AluSx SINE Alu 0 438 1 1654 164 23 10 chr17 69370832 69371171 -20133382 + AluSx SINE Alu 1 312 0 2120 130 10 3 chr17 69372337 69372644 -20131909 - AluSx SINE Alu -3 309 1 2042 130 3 3 chr17 69373651 69373943 -20130610 - AluSg1 SINE Alu -17 292 1 1848 159 13 3 chr17 69374075 69374384 -20130169 + AluJb SINE Alu 1 312 0 250 341 127 40 chr17 69374567 69374740 -20129813 - L2 LINE L2 -52 3220 3033 1191 159 0 0 chr17 69375061 69375243 -20129310 + AluSg/x SINE Alu 130 311 -1 2281 113 0 3 chr17 69375653 69375953 -20128600 - AluSx SINE Alu -13 299 1 1494 160 66 7 chr17 69376165 69376453 -20128100 - AluSg SINE Alu -5 305 1 241 302 60 0 chr17 69376548 69376664 -20127889 + MIR SINE MIR 140 262 0 448 182 25 83 chr17 69376866 69376987 -20127566 + MER81 DNA DNA 1 114 0 1964 123 61 10 chr17 69377358 69377651 -20126902 + AluSx SINE Alu 1 308 -4 1417 163 45 7 chr17 69377661 69377950 -20126603 - L1MB3 LINE L1 -2 6181 5882 615 272 12 18 chr17 69378099 69378268 -20126285 + MER5B DNA MER1_type 1 168 -10 366 379 62 4 chr17 69378697 69378924 -20125629 + L3 LINE CR1 1336 1575 -2 409 278 96 11 chr17 69379618 69379805 -20124748 + Charlie8 DNA MER1_type 74 276 -2141 202 269 119 45 chr17 69382903 69382970 -20121583 - L3b LINE CR1 -2 1581 1510 267 289 82 0 chr17 69383117 69383214 -20121339 - MIR SINE MIR -92 170 66 1832 156 17 0 chr17 69383265 69383566 -20120987 + AluSx SINE Alu 1 306 -6 1904 147 0 7 chr17 69383624 69384103 -20120450 - AluSx SINE Alu 0 477 1 2166 124 0 3 chr17 69385544 69385842 -20118711 + AluSg1 SINE Alu 1 297 -12 227 197 0 6 chr17 69386431 69386493 -20118060 - MIR SINE MIR -76 132 71 202 216 0 0 chr17 69387230 69387267 -20117286 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 414 285 64 23 chr17 69387269 69387441 -20117112 - L2 LINE L2 0 3313 3135 1921 122 0 0 chr17 69387702 69387957 -20116596 + AluSx SINE Alu 5 259 -53 183 314 47 23 chr17 69390457 69390543 -20114010 - MIR3 SINE MIR -10 198 111 2425 90 0 3 chr17 69390553 69390864 -20113689 + AluY SINE Alu 1 310 -1 282 289 90 0 chr17 69390997 69391118 -20113435 - MIR SINE MIR -66 142 39 2104 142 0 7 chr17 69391145 69391448 -20113105 + AluSx SINE Alu 1 301 -11 2109 104 0 0 chr17 69392168 69392455 -20112098 + AluSg1 SINE Alu 14 300 -9 265 324 56 19 chr17 69393046 69393154 -20111399 - MIR SINE MIR -76 132 21 2246 79 0 7 chr17 69393839 69394142 -20110411 - AluY SINE Alu -10 301 1 216 189 0 0 chr17 69394161 69394198 -20110355 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 333 346 32 22 chr17 69394200 69394385 -20110168 - L2 LINE L2 0 3313 3127 215 169 17 0 chr17 69394389 69394431 -20110122 + (TA)n Simple_repeat Simple_repeat 2 47 -14 2129 107 10 0 chr17 69394431 69394722 -20109831 - AluSq SINE Alu -19 294 1 215 169 17 0 chr17 69394722 69394738 -20109815 + (TA)n Simple_repeat Simple_repeat 47 61 0 2286 101 0 0 chr17 69395027 69395334 -20109219 + AluSq SINE Alu 5 311 -2 1969 122 3 39 chr17 69395828 69396003 -20108550 - AluSx SINE Alu -11 301 140 2115 107 17 0 chr17 69396003 69396294 -20108259 - AluSp SINE Alu -17 296 1 1969 122 3 39 chr17 69396294 69396430 -20108123 - AluSx SINE Alu -172 140 1 248 318 88 29 chr17 69397047 69397217 -20107336 + MIR SINE MIR 77 256 -6 272 237 0 4 chr17 69397241 69397324 -20107229 + L1ME1 LINE L1 6045 6147 -64 2063 124 3 7 chr17 69397325 69397623 -20106930 - AluSx SINE Alu -15 297 1 2171 100 0 0 chr17 69397945 69398263 -20106290 + AluSx SINE Alu 1 318 0 655 143 0 0 chr17 69402514 69402605 -20101948 + FLAM_C SINE Alu 27 117 -26 282 133 0 117 chr17 69404130 69404190 -20100363 - MER91A DNA MER1_type -131 62 7 653 88 10 20 chr17 69405045 69405147 -20099406 + L1PB2 LINE L1 6050 6150 -1 201 172 0 86 chr17 69405945 69406003 -20098550 + MIR SINE MIR 103 155 -107 1918 151 6 13 chr17 69406007 69406318 -20098235 - AluJb SINE Alu -3 309 1 1686 218 70 12 chr17 69406635 69406738 -20097815 - L1 LINE L1 -2837 3309 3213 2267 99 0 0 chr17 69406738 69407032 -20097521 - AluSg SINE Alu -16 294 1 1686 218 70 12 chr17 69407032 69407446 -20097107 - L1 LINE L1 -2933 3213 2762 3379 79 2 44 chr17 69407446 69407605 -20096948 + L1PB2 LINE L1 5676 5840 -311 2436 79 0 0 chr17 69407605 69407910 -20096643 + AluY SINE Alu 1 305 -6 3379 79 2 44 chr17 69407910 69408245 -20096308 + L1PB2 LINE L1 5840 6149 -2 1884 144 33 13 chr17 69408567 69408873 -20095680 + AluJo SINE Alu 1 312 0 213 214 0 0 chr17 69409945 69409987 -20094566 + (CA)n Simple_repeat Simple_repeat 1 42 0 368 345 6 0 chr17 69410233 69410404 -20094149 + (CA)n Simple_repeat Simple_repeat 1 172 0 369 0 0 0 chr17 69413149 69413190 -20091363 + (TG)n Simple_repeat Simple_repeat 1 41 0 231 103 0 0 chr17 69413192 69413231 -20091322 + (GA)n Simple_repeat Simple_repeat 2 40 0 515 277 36 0 chr17 69413233 69413370 -20091183 + MIR SINE MIR 79 220 -42 195 42 0 0 chr17 69414107 69414131 -20090422 + (GA)n Simple_repeat Simple_repeat 2 25 0 208 315 63 9 chr17 69414498 69414609 -20089944 - MER91A DNA MER1_type -51 145 29 202 273 13 13 chr17 69414861 69414938 -20089615 + GA-rich Low_complexity Low_complexity 5 81 0 307 311 22 67 chr17 69414962 69415032 -20089521 - MIR SINE MIR -46 216 153 2121 90 3 51 chr17 69415032 69415344 -20089209 - AluSg SINE Alu -13 297 1 307 311 22 67 chr17 69415344 69415408 -20089145 - MIR SINE MIR -109 153 88 978 120 0 0 chr17 69418363 69418496 -20086057 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr17 69421325 69421347 -20083206 + GC_rich Low_complexity Low_complexity 1 22 0 430 248 119 15 chr17 69422155 69422321 -20082232 - MIR SINE MIR -51 157 16 238 220 85 0 chr17 69422933 69422992 -20081561 - MIR SINE MIR -82 180 117 1213 131 180 52 chr17 69423083 69423350 -20081203 - AluYa5 SINE Alu 0 301 1 201 206 27 110 chr17 69423355 69423428 -20081125 + L3b LINE CR1 1293 1359 -224 731 276 70 9 chr17 69423803 69423972 -20080581 + MIR SINE MIR 21 210 -52 2144 83 0 7 chr17 69423972 69424289 -20080264 + AluSc SINE Alu 3 317 0 731 276 70 9 chr17 69424289 69424346 -20080207 + MIR SINE MIR 210 262 0 1551 95 27 5 chr17 69424380 69424602 -20079951 + AluSg/x SINE Alu 85 311 -1 367 258 54 0 chr17 69424666 69424759 -20079794 - MIR SINE MIR -65 143 46 202 318 63 0 chr17 69424758 69424821 -20079732 + MER91C DNA MER1_type 33 99 -41 * 441 245 224 5 chr17 69425771 69425963 -20078590 + MIR SINE MIR 27 260 -2 387 306 191 0 chr17 69426027 69426200 -20078353 + MIR SINE MIR 33 238 -24 625 253 29 36 chr17 69426297 69426491 -20078062 - MIR SINE MIR -35 227 34 1419 164 72 45 chr17 69427132 69427424 -20077129 - AluJo SINE Alu -12 300 1 257 314 70 32 chr17 69427524 69427713 -20076840 - MIR3 SINE MIR -55 207 14 843 214 10 56 chr17 69427729 69427925 -20076628 + MER5A DNA MER1_type 1 187 -2 2066 131 3 3 chr17 69428613 69428925 -20075628 + AluSx SINE Alu 1 312 0 510 142 132 79 chr17 69428950 69428978 -20075575 + L1MC5 LINE L1 7702 7727 -234 1664 129 58 7 chr17 69428978 69429256 -20075297 + AluJb SINE Alu 1 292 -20 510 142 132 79 chr17 69429256 69429417 -20075136 + L1MC5 LINE L1 7727 7901 -60 2328 89 0 0 chr17 69429441 69429744 -20074809 - AluSx SINE Alu -9 303 1 211 304 59 49 chr17 69429930 69430032 -20074521 - MIR SINE MIR -71 191 89 187 339 0 0 chr17 69430567 69430623 -20073930 + MIR SINE MIR 78 133 -75 230 226 19 0 chr17 69433914 69433967 -20070586 + CT-rich Low_complexity Low_complexity 3 56 0 384 77 0 0 chr17 69433968 69434020 -20070533 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 321 324 27 0 chr17 69435059 69435170 -20069383 - MIR3 SINE MIR -2 206 93 270 170 0 0 chr17 69435878 69435925 -20068628 + MIR SINE MIR 216 262 0 2003 135 3 0 chr17 69435938 69436235 -20068318 - AluSx SINE Alu -14 298 1 2298 80 0 0 chr17 69436378 69436677 -20067876 - AluSg SINE Alu -10 300 2 276 276 0 0 chr17 69437795 69437853 -20066700 + MER91C DNA MER1_type 139 196 0 2235 95 0 0 chr17 69438049 69438343 -20066210 - AluSq SINE Alu -18 295 2 364 289 33 8 chr17 69438369 69438490 -20066063 - MIR SINE MIR -72 190 67 2216 102 0 3 chr17 69438542 69438845 -20065708 + AluSx SINE Alu 1 302 -10 379 250 7 46 chr17 69439627 69439725 -20064828 - MER103 DNA DNA -19 147 56 2019 136 7 10 chr17 69439725 69440034 -20064519 - AluSx SINE Alu -4 308 1 379 250 7 46 chr17 69440034 69440087 -20064466 - MER103 DNA DNA -110 56 2 257 336 62 0 chr17 69440237 69440350 -20064203 - L3b LINE CR1 -202 1381 1262 244 313 33 40 chr17 69440396 69440512 -20064041 + MIR3 SINE MIR 59 175 -33 2104 115 3 10 chr17 69440512 69440834 -20063719 - AluSx SINE Alu 0 312 1 244 313 33 40 chr17 69440834 69440867 -20063686 + MIR3 SINE MIR 175 207 -1 866 240 34 0 chr17 69441158 69441362 -20063191 - MIR SINE MIR -28 234 24 927 188 0 0 chr17 69441362 69441522 -20063031 - AluJo/FRAM SINE Alu -19 293 134 2115 132 0 0 chr17 69441522 69441825 -20062728 - AluSx SINE Alu -9 303 1 243 229 0 0 chr17 69442460 69442508 -20062045 + MER91C DNA MER1_type 78 125 -15 218 156 22 0 chr17 69443393 69443438 -20061115 + (CAGA)n Simple_repeat Simple_repeat 3 48 0 472 263 58 32 chr17 69444216 69444406 -20060147 + MER117 DNA MER1_type 3 197 0 917 127 60 0 chr17 69446166 69446316 -20058237 + FRAM SINE Alu 6 164 -12 365 280 125 62 chr17 69446360 69446716 -20057837 + L2 LINE L2 2709 3083 -189 2247 315 115 36 chr17 69446776 69448090 -20056463 + L2 LINE L2 768 1977 -1295 1881 156 0 10 chr17 69448090 69448404 -20056149 + AluJo SINE Alu 1 311 -1 2247 315 115 36 chr17 69448404 69448887 -20055666 + L2 LINE L2 1977 2421 -851 2349 90 3 0 chr17 69448887 69449197 -20055356 + AluSx SINE Alu 1 311 -1 2247 315 115 36 chr17 69449197 69449716 -20054837 + L2 LINE L2 2421 3270 -2 276 300 122 74 chr17 69449778 69450115 -20054438 - L2 LINE L2 0 3272 2920 1629 161 55 7 chr17 69450635 69450926 -20053627 + AluJo SINE Alu 2 306 -6 243 213 16 16 chr17 69450954 69451015 -20053538 - MIR SINE MIR -65 143 83 * 587 250 67 44 chr17 69451014 69451194 -20053359 - L2 LINE L2 0 3313 3130 475 287 153 15 chr17 69451456 69451717 -20052836 - L3 LINE CR1 -437 1140 844 2310 196 34 67 chr17 69451717 69451870 -20052683 + L1M4 LINE L1 3709 3866 -2280 1596 146 10 49 chr17 69451870 69452158 -20052395 + AluJb SINE Alu 22 298 -14 2310 196 34 67 chr17 69452158 69452346 -20052207 + L1M4 LINE L1 3866 4059 -2087 2147 102 16 19 chr17 69452346 69452660 -20051893 - AluSp SINE Alu 0 313 1 2310 196 34 67 chr17 69452660 69452944 -20051609 + L1M4 LINE L1 4059 4314 -1832 249 338 166 16 chr17 69452944 69453252 -20051301 - L3 LINE CR1 -737 840 487 1173 119 5 31 chr17 69453281 69453474 -20051079 + L1PA3 LINE L1 5966 6153 -2 2272 98 38 52 chr17 69453489 69453858 -20050695 + THE1B LTR MaLR 1 364 0 1652 129 104 17 chr17 69454885 69455172 -20049381 - AluSx SINE Alu 0 312 1 201 371 0 0 chr17 69455601 69455671 -20048882 - MIR SINE MIR -11 251 182 390 42 0 0 chr17 69456106 69456154 -20048399 + (CA)n Simple_repeat Simple_repeat 2 49 0 743 199 0 29 chr17 69456254 69456390 -20048163 - FLAM_A SINE Alu -1 132 1 2074 119 0 49 chr17 69457100 69457428 -20047125 + AluSx SINE Alu 1 312 0 558 297 95 26 chr17 69457598 69457830 -20046723 - MIR SINE MIR 0 262 15 267 186 17 8 chr17 69461013 69461131 -20043422 + (CA)n Simple_repeat Simple_repeat 2 120 0 2151 100 13 0 chr17 69461952 69462427 -20042126 - AluSq SINE Alu 0 313 3 287 169 15 15 chr17 69462430 69462495 -20042058 + Tigger5 DNA MER2_type 2255 2319 -4 700 253 28 11 chr17 69463160 69463342 -20041211 + MER91B DNA MER1_type 1 185 -5 423 265 99 78 chr17 69463496 69463779 -20040774 + MLT1K LTR MaLR 120 408 -180 320 0 25 0 chr17 69463789 69463829 -20040724 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 923 143 15 12 chr17 69463861 69464160 -20040393 + GA-rich Low_complexity Low_complexity 1 299 0 1018 110 4 27 chr17 69464160 69464414 -20040139 + (GGGA)n Simple_repeat Simple_repeat 4 249 0 352 268 26 68 chr17 69465257 69465350 -20039203 - L1ME LINE L1 -297 5824 5741 2024 124 24 0 chr17 69465350 69465648 -20038905 - AluSx SINE Alu -7 305 1 352 268 26 68 chr17 69465648 69465744 -20038809 - L1ME LINE L1 -380 5741 5643 198 0 0 0 chr17 69465792 69465814 -20038739 + (A)n Simple_repeat Simple_repeat 1 22 0 209 374 16 8 chr17 69466220 69466343 -20038210 + L2 LINE L2 2609 2732 -582 928 269 55 0 chr17 69466431 69466721 -20037832 - LTR16C LTR ERVL 0 491 186 232 239 0 60 chr17 69466876 69466930 -20037623 + (CATATA)n Simple_repeat Simple_repeat 3 54 -11 2214 80 17 0 chr17 69466930 69467219 -20037334 - AluSq SINE Alu -17 296 3 232 239 0 60 chr17 69467219 69467231 -20037322 + (CATATA)n Simple_repeat Simple_repeat 54 65 0 981 193 0 0 chr17 69467384 69467550 -20037003 - FRAM SINE Alu 0 166 1 190 333 23 76 chr17 69467605 69467776 -20036777 + L2 LINE L2 2688 2849 -465 427 305 23 0 chr17 69470189 69470320 -20034233 + L2 LINE L2 3139 3272 0 339 272 0 0 chr17 69470564 69470711 -20033842 + (TG)n Simple_repeat Simple_repeat 1 147 0 260 341 0 0 chr17 69470731 69470819 -20033734 + (TG)n Simple_repeat Simple_repeat 2 89 0 2228 113 0 0 chr17 69471191 69471502 -20033051 - AluY SINE Alu 0 311 1 2395 58 0 43 chr17 69471514 69471839 -20032714 - AluY SINE Alu 0 311 1 208 236 18 0 chr17 69476571 69476626 -20027927 + L2 LINE L2 2995 3050 -222 514 288 191 12 chr17 69476655 69476974 -20027579 - L2 LINE L2 -1 3312 2937 746 119 16 24 chr17 69476974 69477100 -20027453 + FRAM SINE Alu 43 167 -9 1763 122 75 0 chr17 69477109 69477387 -20027166 + AluJb SINE Alu 1 299 -13 2145 112 3 6 chr17 69478122 69478435 -20026118 - AluSx SINE Alu 0 312 1 748 237 68 0 chr17 69479310 69479487 -20025066 - MIR SINE MIR 0 262 74 331 241 112 17 chr17 69479954 69480070 -20024483 + L2 LINE L2 3138 3264 -8 1125 101 0 0 chr17 69480327 69480476 -20024077 - AluSg/x SINE Alu -18 294 146 3030 129 7 89 chr17 69480533 69481114 -20023439 + LTR26 LTR ERV1 71 603 0 347 338 139 37 chr17 69481416 69481773 -20022780 + L1ME LINE L1 1591 1995 -4417 601 144 17 0 chr17 69481805 69481923 -20022630 + L1MA8 LINE L1 5212 5331 -815 3394 113 12 70 chr17 69481977 69482054 -20022499 + L1MA8 LINE L1 5290 5370 -921 2113 110 0 0 chr17 69482054 69482344 -20022209 + AluY SINE Alu 1 290 -21 3394 113 12 70 chr17 69482344 69482491 -20022062 + L1MA8 LINE L1 5370 5524 -767 898 159 0 0 chr17 69482491 69482623 -20021930 + FLAM_C SINE Alu 2 133 0 3394 113 12 70 chr17 69482623 69483053 -20021500 + L1MA8 LINE L1 5524 5907 -384 802 153 0 0 chr17 69483054 69483172 -20021381 + FLAM_C SINE Alu 1 118 -25 2031 134 0 7 chr17 69483189 69483487 -20021066 + AluSx SINE Alu 1 296 -16 922 188 0 17 chr17 69483580 69483756 -20020797 - MER2 DNA MER2_type -171 174 2 1968 150 3 0 chr17 69483904 69484211 -20020342 + AluSx SINE Alu 1 308 -4 1182 161 0 0 chr17 69484211 69484391 -20020162 + AluSg/x SINE Alu 120 299 -13 604 252 52 37 chr17 69484395 69484674 -20019879 + L1ME LINE L1 2439 2731 -3651 465 249 51 11 chr17 69484859 69485058 -20019495 + L1ME LINE L1 3063 3270 -3112 704 254 0 0 chr17 69485066 69485386 -20019167 + FLAM_C SINE Alu 2 321 0 * 1022 164 0 3 chr17 69485208 69485462 -20019091 + GA-rich Low_complexity Low_complexity 1 254 -372 1022 139 0 11 chr17 69485462 69485642 -20018911 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1022 164 0 3 chr17 69485642 69485656 -20018897 + GA-rich Low_complexity Low_complexity 254 626 0 817 179 0 35 chr17 69485668 69485813 -20018740 + FLAM_C SINE Alu 2 141 -2 718 283 48 99 chr17 69485816 69485943 -20018610 + L1ME LINE L1 3441 3573 -2809 1186 146 22 22 chr17 69485943 69486169 -20018384 + L1MB2 LINE L1 5944 6169 -2 718 283 48 99 chr17 69486169 69486347 -20018206 + L1ME LINE L1 3573 3758 -2624 1807 163 7 0 chr17 69486347 69486642 -20017911 + AluJb SINE Alu 15 311 -1 718 283 48 99 chr17 69486642 69486739 -20017814 + L1ME LINE L1 3758 3858 -2524 750 227 0 0 chr17 69486739 69486871 -20017682 - FLAM_A SINE Alu 0 133 2 718 283 48 99 chr17 69486871 69487167 -20017386 + L1ME LINE L1 3858 4102 -2280 2112 310 84 9 chr17 69487715 69488868 -20015685 + L1ME LINE L1 4074 5312 -1070 2153 87 0 3 chr17 69488944 69489233 -20015320 + AluY SINE Alu 20 307 -4 633 307 62 16 chr17 69489237 69489543 -20015010 + L1ME LINE L1 5574 5893 -505 2233 100 0 3 chr17 69489583 69489893 -20014660 - AluSc SINE Alu 0 309 1 873 172 10 47 chr17 69489894 69490086 -20014467 + MIR SINE MIR 68 252 -10 1018 172 0 0 chr17 69490112 69490297 -20014256 + FAM SINE Alu 1 49 0 2145 101 0 16 chr17 69490407 69490714 -20013839 + AluSc SINE Alu 1 302 -7 220 247 103 0 chr17 69491218 69491315 -20013238 - MIR3 SINE MIR -3 205 99 775 106 21 85 chr17 69491603 69491650 -20012903 - L1MB3 LINE L1 0 6183 6135 2009 123 14 0 chr17 69491650 69491943 -20012610 - AluSx SINE Alu -15 297 1 1554 182 30 10 chr17 69491945 69492241 -20012312 - AluJo SINE Alu -10 302 1 775 106 21 85 chr17 69492241 69492331 -20012222 - L1MB3 LINE L1 -49 6134 6052 2103 110 16 38 chr17 69492332 69492465 -20012088 - AluSx SINE Alu 0 312 178 2005 105 3 41 chr17 69492465 69492801 -20011752 - AluSx SINE Alu 0 312 1 1438 108 27 0 chr17 69492801 69492986 -20011567 - AluSx SINE Alu -122 190 1 2103 110 16 38 chr17 69492801 69492986 -20011567 - AluSx SINE Alu -134 178 1 1257 176 5 5 chr17 69492986 69493207 -20011346 - L1MB3 LINE L1 -352 5831 5611 228 93 47 0 chr17 69493201 69493244 -20011309 - L1MB3 LINE L1 -12 6171 6127 * 859 173 0 0 chr17 69493269 69493402 -20011151 + FLAM_C SINE Alu 1 133 0 2290 124 0 9 chr17 69494274 69494589 -20009964 - AluSx SINE Alu 0 312 1 1250 163 5 5 chr17 69494589 69494810 -20009743 - L1MB3 LINE L1 -352 5831 5611 240 70 47 0 chr17 69494804 69494847 -20009706 - L1MB3 LINE L1 -12 6171 6127 * 850 158 0 0 chr17 69494879 69495006 -20009547 + FLAM_C SINE Alu 12 138 -5 771 206 25 19 chr17 69495682 69495842 -20008711 - MER5A DNA MER1_type 0 189 29 248 91 0 0 chr17 69495841 69495874 -20008679 + MER5A DNA MER1_type 35 67 -122 * 482 143 13 0 chr17 69496025 69496102 -20008451 + MIR SINE MIR 80 157 -105 * 854 254 28 32 chr17 69496095 69496347 -20008206 - MIR SINE MIR 0 262 12 231 247 97 11 chr17 69496377 69496470 -20008083 + MIR SINE MIR 162 262 0 180 0 0 0 chr17 69497240 69497260 -20007293 + (TTTTTG)n Simple_repeat Simple_repeat 5 24 0 1125 68 0 0 chr17 69497277 69497409 -20007144 + AluSg SINE Alu 1 132 -178 304 211 0 0 chr17 69497411 69497463 -20007090 - L1MC4 LINE L1 -1339 6703 6652 * 381 308 18 0 chr17 69497427 69497539 -20007014 + L1MC4 LINE L1 6614 6703 -1339 * 399 250 0 22 chr17 69497471 69497563 -20006990 - L1MC4 LINE L1 -1339 6703 6614 355 333 0 0 chr17 69497483 69497573 -20006980 + L1MC4 LINE L1 6614 6703 -1339 * 332 190 17 0 chr17 69497548 69497606 -20006947 - L1MCa LINE L1 -4362 2064 2006 * 1251 123 0 0 chr17 69497609 69497788 -20006765 + AluSg SINE Alu 123 301 -9 1256 132 68 0 chr17 69497954 69498173 -20006380 - MSTA LTR MaLR -9 419 186 627 218 73 30 chr17 69498173 69498338 -20006215 - FAM SINE Alu 0 175 4 523 230 43 31 chr17 69498383 69498544 -20006009 - MLT1J2 LTR MaLR -287 163 1 262 218 109 20 chr17 69498605 69498706 -20005847 - MER103 DNA DNA -40 126 17 2332 100 10 0 chr17 69498867 69499167 -20005386 + AluSx SINE Alu 1 303 -9 1883 176 0 16 chr17 69499567 69499880 -20004673 + AluJo SINE Alu 1 308 -4 242 206 220 43 chr17 69500112 69500253 -20004300 - L1M4 LINE L1 -3525 2621 2456 228 189 0 0 chr17 69500361 69500398 -20004155 + 5S rRNA rRNA 6 42 -79 23 0 0 0 chr17 69500470 69500493 -20004060 + AT_rich Low_complexity Low_complexity 1 23 0 1862 129 11 11 chr17 69500493 69500779 -20003774 - AluJo SINE Alu -26 286 1 261 0 0 0 chr17 69500978 69501007 -20003546 + (TG)n Simple_repeat Simple_repeat 2 30 0 2249 106 3 22 chr17 69501007 69501318 -20003235 - AluJb SINE Alu -5 307 3 2414 91 3 3 chr17 69501533 69501841 -20002712 - AluSc SINE Alu -1 308 1 2279 106 0 0 chr17 69501841 69502134 -20002419 - AluY SINE Alu -18 293 1 455 291 42 32 chr17 69502302 69502491 -20002062 - MLT1J LTR MaLR -316 195 5 645 306 128 20 chr17 69502569 69502866 -20001687 + L1M4 LINE L1 4744 5072 -1074 977 234 29 66 chr17 69502919 69503310 -20001243 + MLT1H LTR MaLR 1 516 -51 243 0 0 0 chr17 69503310 69503337 -20001216 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 977 234 29 66 chr17 69503337 69503382 -20001171 + MLT1H LTR MaLR 516 561 -6 368 185 22 65 chr17 69503389 69503481 -20001072 + L1MC4a LINE L1 5630 5717 -2091 1865 162 0 4 chr17 69503509 69503781 -20000772 - AluJb SINE Alu -32 280 10 585 231 50 0 chr17 69503796 69503956 -20000597 + L1MC4a LINE L1 5706 5873 -1935 2329 100 0 3 chr17 69503980 69504280 -20000273 + AluSg SINE Alu 1 299 -11 1817 196 66 29 chr17 69504282 69504735 -19999818 + L1ME3 LINE L1 5685 6154 -8 1287 167 59 70 chr17 69504735 69505005 -19999548 - AluJb SINE Alu -7 305 39 839 188 0 0 chr17 69505007 69505140 -19999413 - FLAM_A SINE Alu 0 133 1 314 290 145 36 chr17 69505160 69505353 -19999200 + L1MC4a LINE L1 5859 6072 -1736 2062 47 0 8 chr17 69505397 69505652 -19998901 - L1PA4 LINE L1 -3 6152 5900 2325 86 3 0 chr17 69505652 69505944 -19998609 - AluY SINE Alu -18 293 1 25 0 0 0 chr17 69506411 69506436 -19998117 + AT_rich Low_complexity Low_complexity 1 25 0 1343 175 100 26 chr17 69506436 69506705 -19997848 + AluJo SINE Alu 3 291 -11 1357 121 14 37 chr17 69506860 69507075 -19997478 + AluJo SINE Alu 1 210 -102 231 347 21 42 chr17 69507362 69507506 -19997047 - L3 LINE CR1 -776 801 661 1091 178 294 27 chr17 69507673 69508010 -19996543 + LTR47A LTR ERVL 1 427 -25 3217 127 99 37 chr17 69508636 69509233 -19995320 + MER51A LTR ERV1 1 634 0 23 0 0 0 chr17 69510498 69510521 -19994032 + AT_rich Low_complexity Low_complexity 1 23 0 2361 87 0 13 chr17 69511737 69512047 -19992506 + AluSg SINE Alu 1 306 -4 427 295 43 36 chr17 69512595 69512734 -19991819 + L2 LINE L2 3172 3311 -2 295 258 0 54 chr17 69517482 69517575 -19986978 - L2 LINE L2 -38 3275 3188 2319 113 0 10 chr17 69517950 69518260 -19986293 + AluSx SINE Alu 1 307 -5 398 306 181 25 chr17 69518272 69518432 -19986121 + L1MC5 LINE L1 7738 7922 -39 330 247 123 4 chr17 69518440 69518683 -19985870 + L1ME4a LINE L1 5775 6080 -41 297 332 95 28 chr17 69518914 69519239 -19985314 + L1ME2 LINE L1 5588 5934 -187 274 259 139 9 chr17 69519595 69519703 -19984850 - MIR3 SINE MIR -17 191 70 291 288 102 42 chr17 69520298 69520416 -19984137 + MIR SINE MIR 118 242 -20 350 276 90 8 chr17 69520423 69520557 -19983996 + L2 LINE L2 3168 3312 -1 303 323 67 18 chr17 69520893 69521057 -19983496 - MIR SINE MIR -70 192 21 1087 239 106 112 chr17 69521787 69522958 -19981595 + L1MC4 LINE L1 6830 7995 -47 677 154 109 0 chr17 69522958 69523068 -19981485 + FLAM_C SINE Alu 2 123 -10 1087 239 106 112 chr17 69523068 69523113 -19981440 + L1MC4 LINE L1 7995 8039 -3 1170 139 12 0 chr17 69523229 69523394 -19981159 + AluSg/x SINE Alu 132 298 -12 414 240 0 10 chr17 69524714 69524818 -19979735 + L1ME2 LINE L1 6035 6137 -27 1739 157 0 11 chr17 69524820 69525081 -19979472 - AluJb SINE Alu -22 290 33 180 0 0 0 chr17 69526734 69526754 -19977799 + (CTG)n Simple_repeat Simple_repeat 3 22 0 393 275 38 15 chr17 69527589 69527720 -19976833 + MIR SINE MIR 49 182 -80 2399 70 0 42 chr17 69528228 69528541 -19976012 - AluY SINE Alu -11 300 1 636 296 40 69 chr17 69528950 69529373 -19975180 - MARNA DNA Mariner -7 579 169 309 218 83 30 chr17 69529894 69530027 -19974526 + L1ME4a LINE L1 5970 6109 -12 479 297 22 22 chr17 69530354 69530536 -19974017 + LTR33 LTR ERVL 5 186 -335 965 128 0 0 chr17 69530731 69530864 -19973689 - FLAM_C SINE Alu 0 133 1 272 307 90 61 chr17 69530877 69531309 -19973244 + L2 LINE L2 2778 3221 -51 193 347 125 0 chr17 69532053 69532125 -19972428 - L2 LINE L2 -7 3265 3185 279 256 81 0 chr17 69532574 69532660 -19971893 + MER5A DNA MER1_type 81 173 -16 229 245 0 0 chr17 69533014 69533067 -19971486 + MER5A DNA MER1_type 63 115 -74 418 198 42 31 chr17 69534497 69534593 -19969960 + MIR SINE MIR 117 213 -49 713 193 0 0 chr17 69537204 69537313 -19967240 - FLAM_A SINE Alu -33 109 1 1634 160 3 58 chr17 69538189 69538502 -19966051 + AluJo SINE Alu 9 304 -8 435 230 79 8 chr17 69539362 69539488 -19965065 + MLT1G LTR MaLR 451 585 -5 302 292 0 11 chr17 69539499 69539588 -19964965 + MLT1H-int LTR MaLR 5 92 -1279 373 297 50 42 chr17 69539633 69539872 -19964681 + MLT1H-int LTR MaLR 320 560 -811 253 252 107 110 chr17 69540452 69540761 -19963792 + MLT1H-int LTR MaLR 1010 1317 -54 590 289 60 17 chr17 69540840 69541088 -19963465 + MLT1H LTR MaLR 59 319 -230 364 189 221 16 chr17 69541097 69541224 -19963329 + MLT1H LTR MaLR 435 587 -3 493 240 118 36 chr17 69541772 69541993 -19962560 - L2 LINE L2 0 3313 3075 183 358 128 17 chr17 69542043 69542222 -19962331 - L2 LINE L2 -131 3141 2943 2229 99 0 30 chr17 69542291 69542595 -19961958 - AluSq SINE Alu -18 295 1 284 388 33 11 chr17 69542614 69542797 -19961756 - L2 LINE L2 -469 2845 2659 1347 190 6 94 chr17 69543878 69544044 -19960509 - AluSq SINE Alu -11 302 123 2219 99 0 23 chr17 69544044 69544348 -19960205 - AluY SINE Alu -14 297 1 2362 101 0 0 chr17 69544358 69544664 -19959889 - AluY SINE Alu -5 306 1 1347 190 6 94 chr17 69544664 69544817 -19959736 - AluSq SINE Alu -199 114 1 213 39 0 0 chr17 69546125 69546151 -19958402 + (A)n Simple_repeat Simple_repeat 1 26 0 1214 133 0 6 chr17 69546305 69546478 -19958075 - AluSg/x SINE Alu -11 301 130 2386 40 7 4 chr17 69547478 69547753 -19956800 - AluY SINE Alu -15 296 21 278 315 110 0 chr17 69547802 69547948 -19956605 + MIR SINE MIR 89 250 -12 274 160 20 0 chr17 69548114 69548164 -19956389 - MER5B DNA MER1_type 0 178 128 2204 256 107 19 chr17 69548164 69548616 -19955937 - L1ME3A LINE L1 -5 6165 5754 2398 65 41 0 chr17 69548616 69548906 -19955647 - AluY SINE Alu -9 302 1 2204 256 107 19 chr17 69548906 69549595 -19954958 - L1ME3A LINE L1 -416 5754 4883 1918 160 0 7 chr17 69549595 69549895 -19954658 + AluJb SINE Alu 1 298 -14 2204 256 107 19 chr17 69549895 69549978 -19954575 - L1ME3A LINE L1 -1287 4883 4809 366 225 94 87 chr17 69549978 69550116 -19954437 + MER5B DNA MER1_type 40 178 0 395 225 139 31 chr17 69550319 69550448 -19954105 + MER5B DNA MER1_type 3 145 -33 286 252 242 35 chr17 69552152 69552466 -19952087 + L1ME4a LINE L1 5547 5925 -196 246 254 57 78 chr17 69553949 69554142 -19950411 + L1MC5 LINE L1 7743 7931 -30 574 253 0 41 chr17 69555290 69555460 -19949093 + MIR SINE MIR 28 190 -72 805 232 164 33 chr17 69555497 69556025 -19948528 + L2 LINE L2 2688 3308 -5 2752 130 26 0 chr17 69556044 69556460 -19948093 - MSTB1 LTR MaLR 0 432 6 1838 225 59 58 chr17 69557040 69557511 -19947042 - L1ME2 LINE L1 -34 6130 5656 2219 106 3 0 chr17 69557511 69557804 -19946749 - AluSg SINE Alu -3 307 14 1838 225 59 58 chr17 69557804 69557941 -19946612 - L1ME2 LINE L1 -508 5656 5521 368 218 20 20 chr17 69558479 69558580 -19945973 + L1MC5 LINE L1 7831 7931 -30 2541 78 0 0 chr17 69559911 69560219 -19944334 + AluY SINE Alu 1 308 -3 1535 138 17 0 chr17 69560232 69560464 -19944089 + MER46A DNA MER2_type 1 236 0 336 315 21 14 chr17 69561641 69561784 -19942769 + L1MC5 LINE L1 7786 7929 -32 230 150 0 0 chr17 69562713 69562753 -19941800 - MER5C DNA MER1_type 0 324 285 219 213 0 21 chr17 69563322 69563369 -19941184 + L2 LINE L2 3226 3271 -42 270 286 38 9 chr17 69564180 69564285 -19940268 + L2 LINE L2 2577 2684 -630 1217 224 98 15 chr17 69564419 69564754 -19939799 - MLT1C LTR MaLR -68 399 37 1782 157 20 14 chr17 69564754 69565048 -19939505 - AluJo SINE Alu -16 296 1 963 242 65 22 chr17 69565177 69565532 -19939021 + L1M4 LINE L1 2218 2587 -3559 2108 106 7 7 chr17 69565592 69565909 -19938644 - AluSx SINE Alu 0 312 1 361 136 0 0 chr17 69565933 69565992 -19938561 - MER20 DNA MER1_type -35 184 126 741 139 0 0 chr17 69565993 69566101 -19938452 + AluJb SINE Alu 2 109 -203 318 26 0 0 chr17 69566306 69566345 -19938208 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2135 117 0 3 chr17 69566345 69566627 -19937926 - AluSq SINE Alu -32 281 1 184 214 36 18 chr17 69566703 69566759 -19937794 + L2 LINE L2 3216 3272 0 350 90 64 8 chr17 69566815 69566912 -19937641 + Alu SINE Alu 1 53 -249 940 189 86 57 chr17 69567012 69567256 -19937297 - MLT1A2 LTR MaLR -123 251 1 214 244 183 0 chr17 69567257 69567339 -19937214 + L2 LINE L2 2713 2809 -505 1090 258 120 8 chr17 69567340 69567708 -19936845 + MER20B DNA MER1_type 1 409 -374 310 183 99 35 chr17 69567802 69567944 -19936609 + MER20B DNA MER1_type 560 710 -73 543 269 123 46 chr17 69568013 69568403 -19936150 + L2 LINE L2 2852 3271 -42 1882 143 37 0 chr17 69568623 69568921 -19935632 + AluSx SINE Alu 1 308 0 3489 118 15 44 chr17 69569555 69570098 -19934455 + MER1A DNA MER1_type 1 527 0 226 156 322 0 chr17 69571804 69571894 -19932659 - MIR SINE MIR -57 151 33 26 0 0 0 chr17 69572278 69572304 -19932249 + AT_rich Low_complexity Low_complexity 1 26 0 512 265 149 22 chr17 69572377 69572732 -19931821 + L1ME4a LINE L1 5523 5922 -199 2082 116 0 38 chr17 69573955 69574274 -19930279 + AluSx SINE Alu 1 308 0 445 132 0 0 chr17 69574471 69574539 -19930014 + MLT1K LTR MaLR 510 577 -11 2179 113 0 16 chr17 69574589 69574898 -19929655 + AluSx SINE Alu 1 304 -8 2148 114 0 20 chr17 69575464 69575763 -19928790 + AluSx SINE Alu 1 293 -19 2412 90 0 3 chr17 69576680 69576981 -19927572 + AluSx SINE Alu 1 300 -12 1555 202 3 14 chr17 69577425 69577742 -19926811 + AluJo SINE Alu 3 316 0 2267 107 0 0 chr17 69578003 69578294 -19926259 + AluSx SINE Alu 1 291 -21 1483 185 43 4 chr17 69578585 69578861 -19925692 - AluJo SINE Alu -11 301 15 25 0 0 0 chr17 69578861 69578886 -19925667 + AT_rich Low_complexity Low_complexity 1 25 0 2181 87 40 17 chr17 69579150 69579449 -19925104 + AluSq SINE Alu 1 306 -7 441 0 0 0 chr17 69580181 69580230 -19924323 + (CA)n Simple_repeat Simple_repeat 2 50 0 1935 125 14 14 chr17 69580783 69581072 -19923481 - AluJo SINE Alu -9 303 15 2371 101 0 3 chr17 69582306 69582614 -19921939 + AluSq SINE Alu 1 307 -6 659 257 38 0 chr17 69583108 69583291 -19921262 - MIR3 SINE MIR -17 191 2 1667 94 0 0 chr17 69583682 69583916 -19920637 - L1MA8 LINE L1 -3 6288 6055 23 0 0 0 chr17 69584591 69584614 -19919939 + AT_rich Low_complexity Low_complexity 1 23 0 546 118 0 0 chr17 69584625 69584710 -19919843 - L1MA8 LINE L1 -3 6288 6204 2412 94 0 3 chr17 69584823 69585122 -19919431 - AluSq SINE Alu -15 298 1 21 0 0 0 chr17 69585323 69585344 -19919209 + AT_rich Low_complexity Low_complexity 1 21 0 2111 149 0 0 chr17 69585551 69585860 -19918693 + AluSx SINE Alu 1 309 -3 364 180 56 11 chr17 69586054 69586143 -19918410 + MIR SINE MIR 88 180 -82 639 206 156 0 chr17 69586145 69586286 -19918267 + MER21A LTR ERV1 416 578 -353 1187 110 0 0 chr17 69586980 69587135 -19917418 - AluSg/x SINE Alu -17 293 139 2274 75 0 4 chr17 69587147 69587445 -19917108 - AluSg1 SINE Alu 0 299 3 245 236 42 14 chr17 69587571 69587643 -19916910 + MIR SINE MIR 189 262 0 * 424 360 106 14 chr17 69587638 69588055 -19916498 - L2 LINE L2 -32 3281 2827 219 36 0 0 chr17 69590120 69590148 -19914405 + (CA)n Simple_repeat Simple_repeat 2 29 0 2190 94 0 52 chr17 69590288 69590616 -19913937 + AluY SINE Alu 1 311 0 2244 131 0 0 chr17 69590626 69590938 -19913615 + AluSx SINE Alu 1 312 0 488 257 54 68 chr17 69591243 69591465 -19913088 + L2 LINE L2 3095 3313 0 338 278 62 0 chr17 69591647 69591744 -19912809 - MIR3 SINE MIR -41 167 65 186 103 0 0 chr17 69592601 69592630 -19911923 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 2481 74 0 10 chr17 69592842 69593152 -19911401 - AluSq SINE Alu -1 312 6 185 163 93 0 chr17 69593342 69593385 -19911168 - MER5B DNA MER1_type -8 170 124 760 139 16 16 chr17 69593399 69593521 -19911032 - AluJb SINE Alu -189 123 2 373 256 72 8 chr17 69593536 69593661 -19910892 - MER5B DNA MER1_type -45 133 1 207 273 36 109 chr17 69594390 69594500 -19910053 - L2 LINE L2 -8 3264 3163 2217 99 17 0 chr17 69594959 69595252 -19909301 - AluSg SINE Alu -12 298 1 229 313 94 21 chr17 69595609 69595705 -19908848 + MIR SINE MIR 35 137 -71 791 248 67 4 chr17 69595932 69596170 -19908383 - MARNA DNA Mariner -100 486 234 321 279 57 79 chr17 69597094 69597234 -19907319 + L1ME4a LINE L1 5602 5738 -383 320 191 87 52 chr17 69597251 69597366 -19907187 + L1ME4a LINE L1 5718 5836 -285 4497 158 6 22 chr17 69597473 69597836 -19906717 + L1MB8 LINE L1 5403 5770 -408 2360 118 19 25 chr17 69597836 69598202 -19906351 + THE1B LTR MaLR 1 364 0 4497 158 6 22 chr17 69598202 69598625 -19905928 + L1MB8 LINE L1 5770 6177 -1 236 256 7 58 chr17 69598621 69598758 -19905795 + L1ME4a LINE L1 5991 6120 -1 * 2156 117 0 0 chr17 69598947 69599254 -19905299 - AluSx SINE Alu -5 307 1 2378 72 0 10 chr17 69600937 69601243 -19903310 + AluSq SINE Alu 1 303 -10 1982 91 23 52 chr17 69601469 69601776 -19902777 - AluSx SINE Alu -14 298 1 24 53 0 0 chr17 69603026 69603064 -19901489 + GC_rich Low_complexity Low_complexity 1 38 0 207 69 0 0 chr17 69603452 69603481 -19901072 + (CAG)n Simple_repeat Simple_repeat 3 31 0 276 220 45 38 chr17 69603666 69603798 -19900755 + G-rich Low_complexity Low_complexity 3 135 0 184 286 0 0 chr17 69604574 69604609 -19899944 - L2 LINE L2 -182 3090 3056 638 158 108 0 chr17 69605109 69605229 -19899324 - FLAM_A SINE Alu 0 133 1 2222 76 13 3 chr17 69605636 69605940 -19898613 - AluSq SINE Alu -6 307 1 1695 143 26 46 chr17 69606460 69606767 -19897786 + AluJo SINE Alu 1 301 -11 2186 95 0 19 chr17 69606767 69607081 -19897472 + AluSg SINE Alu 1 309 -1 1578 167 11 7 chr17 69607630 69607943 -19896610 + AluJb SINE Alu 1 314 0 1311 163 3 113 chr17 69608925 69609207 -19895346 - AluJb SINE Alu -17 285 40 2311 83 0 0 chr17 69609207 69609508 -19895045 + AluSg SINE Alu 1 301 -9 1311 163 3 113 chr17 69609508 69609545 -19895008 - AluJb SINE Alu -262 40 1 22 0 0 0 chr17 69609635 69609657 -19894896 + AT_rich Low_complexity Low_complexity 1 22 0 2605 201 70 80 chr17 69609915 69610720 -19893833 + L1M4 LINE L1 4247 5058 -1088 2082 97 0 4 chr17 69610720 69610999 -19893554 + AluSc SINE Alu 4 281 -28 204 0 83 0 chr17 69610999 69611035 -19893518 + (TTAAA)n Simple_repeat Simple_repeat 2 40 0 2605 201 70 80 chr17 69611035 69611195 -19893358 + L1M4 LINE L1 5056 5204 -942 2266 91 3 0 chr17 69611195 69611502 -19893051 + AluSx SINE Alu 1 308 -4 2101 108 7 0 chr17 69611525 69611822 -19892731 + AluSg SINE Alu 1 299 -11 296 216 0 0 chr17 69611822 69611873 -19892680 - L1MC/D LINE L1 -806 5538 5488 23 0 0 0 chr17 69611984 69612007 -19892546 + AT_rich Low_complexity Low_complexity 1 23 0 2250 78 10 0 chr17 69612231 69612525 -19892028 - AluSg SINE Alu -13 297 1 241 305 116 6 chr17 69613051 69613172 -19891381 - MIR SINE MIR -80 128 17 987 101 0 14 chr17 69617093 69617231 -19887322 + AluSq/x SINE Alu 1 136 -177 2355 90 0 3 chr17 69617231 69617543 -19887010 + AluY SINE Alu 1 311 0 253 311 74 8 chr17 69617918 69618040 -19886513 + L2 LINE L2 3142 3271 -1 314 284 37 80 chr17 69618876 69619038 -19885515 - HAL1b LINE L1 0 1348 1194 289 219 187 26 chr17 69619185 69619320 -19885233 - MER5C DNA MER1_type -57 267 2 331 122 96 96 chr17 69619454 69619569 -19884984 + L1ME4a LINE L1 5990 6104 -17 357 196 93 31 chr17 69619906 69620003 -19884550 + MER5B DNA MER1_type 72 174 -4 390 258 68 30 chr17 69620102 69620234 -19884319 + MIR SINE MIR 126 262 0 1119 171 25 20 chr17 69620840 69621039 -19883514 - MER20 DNA MER1_type -18 201 2 1329 133 0 22 chr17 69621327 69621552 -19883001 + AluJo SINE Alu 87 306 -6 720 272 170 24 chr17 69624806 69625313 -19879240 + MARNA DNA Mariner 6 586 0 22 0 0 0 chr17 69627702 69627724 -19876829 + AT_rich Low_complexity Low_complexity 1 22 0 1531 158 7 55 chr17 69630725 69631035 -19873518 - AluJb SINE Alu -17 295 1 1866 127 62 0 chr17 69631751 69632043 -19872510 + AluSx SINE Alu 1 310 -2 571 304 73 5 chr17 69633800 69634020 -19870533 - MIR SINE MIR -6 256 22 381 136 32 136 chr17 69634225 69634350 -19870203 + L1ME4a LINE L1 5964 6075 -46 216 0 0 0 chr17 69634869 69634893 -19869660 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 566 233 109 89 chr17 69635013 69635132 -19869421 - MIR SINE MIR -5 257 142 2122 115 0 0 chr17 69635132 69635428 -19869125 + AluSq SINE Alu 1 296 -17 566 233 109 89 chr17 69635428 69635546 -19869007 - MIR SINE MIR -120 142 15 332 82 14 0 chr17 69636498 69636558 -19867995 - Alu SINE Alu -3 305 259 280 30 0 0 chr17 69636542 69636575 -19867978 - AluSp/q SINE Alu -115 188 156 * 2056 139 0 0 chr17 69636631 69636934 -19867619 - AluSx SINE Alu -9 303 1 181 182 0 0 chr17 69637861 69637894 -19866659 - L2 LINE L2 -5 3267 3235 2375 80 0 6 chr17 69638218 69638530 -19866023 - AluSq SINE Alu -3 310 1 693 284 101 16 chr17 69638905 69639211 -19865342 - L2 LINE L2 -2 3311 2980 1911 147 3 6 chr17 69639292 69639605 -19864948 + AluSx SINE Alu 1 312 0 2286 80 3 0 chr17 69639668 69639968 -19864585 + AluY SINE Alu 1 301 -10 1118 221 224 28 chr17 69639988 69640422 -19864131 + LTR33 LTR ERVL 3 521 0 300 368 39 35 chr17 69640476 69640707 -19863846 - L1 LINE L1 -1040 5106 4875 230 216 0 0 chr17 69640755 69640806 -19863747 - L1 LINE L1 -1361 4785 4735 1672 164 13 10 chr17 69641439 69641738 -19862815 - AluJo SINE Alu -10 302 3 765 195 61 6 chr17 69643173 69643337 -19861216 - FRAM SINE Alu -4 172 1 449 225 155 4 chr17 69645529 69645660 -19858893 - MER5B DNA MER1_type -26 163 3 1494 121 22 9 chr17 69646675 69646906 -19857647 + LTR12 LTR ERV1 1 234 -480 334 134 45 0 chr17 69646956 69647023 -19857530 + LTR12 LTR ERV1 219 288 -426 315 264 11 0 chr17 69647023 69647114 -19857439 + LTR30 LTR ERV1 552 643 -79 659 157 0 0 chr17 69647115 69647217 -19857336 + LTR12 LTR ERV1 481 582 -132 392 218 23 138 chr17 69648653 69648791 -19855762 - L1ME4a LINE L1 -81 6040 5924 2155 112 7 0 chr17 69648791 69649094 -19855459 + AluSc SINE Alu 1 305 -4 392 218 23 138 chr17 69649094 69649129 -19855424 - L1ME4a LINE L1 -197 5924 5887 207 0 0 0 chr17 69649248 69649271 -19855282 + (A)n Simple_repeat Simple_repeat 1 23 0 1888 125 10 7 chr17 69649298 69649595 -19854958 - AluSp SINE Alu -15 298 1 3260 142 26 93 chr17 69649612 69649670 -19854883 - L1MB8 LINE L1 0 6178 6118 3140 155 47 7 chr17 69649670 69650262 -19854291 + L1MB3 LINE L1 5559 6174 -9 3260 142 26 93 chr17 69650262 69650679 -19853874 - L1MB8 LINE L1 -60 6118 5675 1987 142 0 0 chr17 69650679 69650981 -19853572 - AluSx SINE Alu -6 306 5 3260 142 26 93 chr17 69650981 69651202 -19853351 - L1MB8 LINE L1 -503 5675 5532 1993 141 0 3 chr17 69651202 69651507 -19853046 - AluSx SINE Alu -8 304 1 3260 142 26 93 chr17 69651507 69651563 -19852990 - L1MB8 LINE L1 -646 5532 5474 820 145 0 36 chr17 69651574 69651712 -19852841 - AluJb SINE Alu -178 134 2 2542 164 18 53 chr17 69651717 69651885 -19852668 - L1MB8 LINE L1 -688 5486 5314 1702 166 10 20 chr17 69651885 69652181 -19852372 - AluJb SINE Alu -19 293 1 2542 164 18 53 chr17 69652181 69652657 -19851896 - L1MB8 LINE L1 -860 5314 4861 23 0 0 0 chr17 69652664 69652687 -19851866 + AT_rich Low_complexity Low_complexity 1 23 0 404 113 0 0 chr17 69653349 69653411 -19851142 + Alu SINE Alu 236 297 -13 1978 117 7 0 chr17 69653421 69653712 -19850841 + AluSq SINE Alu 1 293 -20 1959 117 0 30 chr17 69654314 69654614 -19849939 + AluJb SINE Alu 1 291 -21 392 306 70 56 chr17 69654752 69654948 -19849605 + MIR SINE MIR 37 235 -27 836 259 229 37 chr17 69655135 69655677 -19848876 + L2 LINE L2 2429 3133 -180 210 37 0 0 chr17 69655677 69655704 -19848849 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 836 259 229 37 chr17 69655704 69655874 -19848679 + L2 LINE L2 3133 3269 -44 2457 60 0 0 chr17 69656314 69656612 -19847941 + AluY SINE Alu 1 298 -13 473 324 97 66 chr17 69656912 69657464 -19847089 - L2 LINE L2 -36 3236 2664 2097 121 0 9 chr17 69657479 69657794 -19846759 + AluSx SINE Alu 1 312 0 610 121 0 0 chr17 69658076 69658167 -19846386 + L1MD3 LINE L1 7742 7832 -163 222 218 141 0 chr17 69658505 69658583 -19845970 + MER5A DNA MER1_type 21 109 -80 1554 144 21 55 chr17 69659239 69659314 -19845239 - MER33 DNA MER1_type -2269 316 240 2239 109 3 3 chr17 69659314 69659627 -19844926 + AluSq SINE Alu 1 313 0 1554 144 21 55 chr17 69659627 69659878 -19844675 - MER33 DNA MER1_type -2345 240 1 1942 181 90 9 chr17 69659954 69660386 -19844167 + MLT1C LTR MaLR 1 467 0 201 39 0 0 chr17 69661243 69661269 -19843284 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 435 226 182 13 chr17 69662389 69662548 -19842005 + MER5A DNA MER1_type 4 189 0 1657 241 114 26 chr17 69664514 69664610 -19839943 - L1M4 LINE L1 -2260 3886 3800 744 256 54 39 chr17 69664610 69664813 -19839740 - MER63A DNA MER1_type -3 207 2 1657 241 114 26 chr17 69664813 69665301 -19839252 - L1M4 LINE L1 -2346 3800 3250 240 143 0 0 chr17 69665301 69665343 -19839210 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1529 192 0 18 chr17 69665353 69665639 -19838914 - AluJo SINE Alu -27 285 5 1216 183 141 6 chr17 69665649 69665982 -19838571 - L1M4 LINE L1 -3124 3022 2645 2262 97 0 0 chr17 69667011 69667311 -19837242 - AluSx SINE Alu -7 305 6 1278 176 50 11 chr17 69667320 69667599 -19836954 - MER33 DNA MER1_type -34 290 1 224 340 57 19 chr17 69668931 69669037 -19835516 + MIR SINE MIR 32 141 -67 411 197 73 66 chr17 69669280 69669417 -19835136 - MIR3 SINE MIR -56 152 15 293 328 179 25 chr17 69669427 69669628 -19834925 + L2 LINE L2 2973 3204 -68 186 191 85 0 chr17 69669661 69669708 -19834845 + MIR SINE MIR 158 208 -54 577 225 40 20 chr17 69672084 69672235 -19832318 - Charlie7 DNA MER1_type -1889 723 570 355 208 0 85 chr17 69672669 69672799 -19831754 + L1MC5 LINE L1 7817 7935 -26 990 114 0 0 chr17 69672946 69673086 -19831467 + AluSg/x SINE Alu 133 272 -40 228 35 0 0 chr17 69673089 69673118 -19831435 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2185 99 3 13 chr17 69674330 69674643 -19829910 - AluSq SINE Alu -3 310 1 2373 63 7 3 chr17 69675510 69675813 -19828740 - AluY SINE Alu -7 304 1 1793 144 16 16 chr17 69676006 69676318 -19828235 - AluJb SINE Alu 0 312 1 1831 163 0 7 chr17 69676405 69676706 -19827847 - AluJo SINE Alu -13 299 1 385 331 73 0 chr17 69676808 69676932 -19827621 - L2 LINE L2 -3 3269 3137 507 180 118 50 chr17 69677452 69677613 -19826940 + MIR SINE MIR 63 234 -28 225 0 0 0 chr17 69678414 69678439 -19826114 + (T)n Simple_repeat Simple_repeat 1 25 0 2084 106 3 0 chr17 69678731 69679040 -19825513 - AluSx SINE Alu 0 310 1 267 281 96 37 chr17 69679040 69679175 -19825378 + MIR SINE MIR 66 208 -54 1066 189 122 42 chr17 69679235 69679521 -19825032 - MER2 DNA MER2_type -25 320 12 803 155 0 0 chr17 69679644 69679760 -19824793 + FLAM_C SINE Alu 1 116 -17 222 37 0 0 chr17 69681844 69681871 -19822682 + (TCC)n Simple_repeat Simple_repeat 2 28 0 391 323 88 21 chr17 69683300 69683492 -19821061 + MIR3 SINE MIR 3 207 -1 328 224 30 0 chr17 69684855 69684922 -19819631 + MIR3 SINE MIR 113 181 -27 866 195 0 0 chr17 69685879 69686038 -19818515 + AluSg/x SINE Alu 135 293 -17 1759 100 0 0 chr17 69686186 69686427 -19818126 - AluSg/x SINE Alu 0 310 70 1066 189 122 42 chr17 69686681 69686967 -19817586 + MER2 DNA MER2_type 12 320 -25 267 281 96 37 chr17 69687027 69687162 -19817391 - MIR SINE MIR -54 208 66 2085 106 3 0 chr17 69687162 69687471 -19817082 + AluSx SINE Alu 1 310 0 207 0 0 0 chr17 69687764 69687787 -19816766 + (A)n Simple_repeat Simple_repeat 1 23 0 2004 143 0 0 chr17 69688158 69688466 -19816087 - AluSx SINE Alu -4 308 1 2001 118 38 0 chr17 69689853 69690142 -19814411 + AluSx SINE Alu 1 300 -12 2896 148 21 14 chr17 69690438 69690924 -19813629 - MER50 LTR ERV1 -245 489 1 324 342 43 77 chr17 69691272 69691690 -19812863 + L2 LINE L2 2864 3267 -5 994 187 30 10 chr17 69691716 69691914 -19812639 - MER20 DNA MER1_type 0 219 18 1761 140 0 11 chr17 69692389 69692696 -19811857 + AluJb SINE Alu 1 304 0 1225 183 5 5 chr17 69693113 69693337 -19811216 + AluJb SINE Alu 64 287 -25 369 226 9 85 chr17 69693398 69693466 -19811087 + MER5A DNA MER1_type 9 68 -121 979 171 6 0 chr17 69693466 69693630 -19810923 + FRAM SINE Alu 1 165 -1 369 226 9 85 chr17 69693630 69693667 -19810886 + MER5A DNA MER1_type 68 106 -83 428 279 0 0 chr17 69693935 69694046 -19810507 + L1MC4 LINE L1 7537 7647 -395 2239 99 0 0 chr17 69694067 69694361 -19810192 + AluSx SINE Alu 1 294 -18 466 208 21 0 chr17 69694610 69694706 -19809847 + AluJo SINE Alu 123 220 -92 1192 165 5 5 chr17 69694858 69695064 -19809489 - AluJb SINE Alu -106 206 1 25 0 0 0 chr17 69695064 69695089 -19809464 + AT_rich Low_complexity Low_complexity 1 25 0 204 97 0 0 chr17 69695089 69695120 -19809433 + (TG)n Simple_repeat Simple_repeat 2 32 0 555 185 23 23 chr17 69695125 69695255 -19809298 + L1MC4 LINE L1 7913 8042 0 1954 150 0 0 chr17 69695263 69695556 -19808997 + AluJb SINE Alu 4 296 -16 1831 143 0 0 chr17 69696149 69696421 -19808132 + AluSx SINE Alu 30 301 -11 510 169 0 0 chr17 69696341 69696424 -19808129 + AluS SINE Alu 222 304 -8 406 238 99 6 chr17 69696731 69696867 -19807686 - MIR SINE MIR -63 145 41 933 176 23 17 chr17 69696885 69697061 -19807492 - MER5B DNA MER1_type 0 178 2 211 118 0 39 chr17 69697172 69697223 -19807330 + (TG)n Simple_repeat Simple_repeat 2 50 0 * 580 183 38 54 chr17 69697222 69697389 -19807164 - AluY SINE Alu -8 303 138 2519 58 0 10 chr17 69697389 69697702 -19806851 - AluYa5 SINE Alu -1 310 1 580 183 38 54 chr17 69697702 69697720 -19806833 - AluY SINE Alu -173 138 121 302 265 163 0 chr17 69697737 69697835 -19806718 + L2 LINE L2 3196 3309 -4 418 261 117 9 chr17 69697964 69698186 -19806367 - L1ME LINE L1 -297 5824 5579 2650 58 0 0 chr17 69698282 69698592 -19805961 - AluY SINE Alu 0 311 2 749 313 19 4 chr17 69699138 69699394 -19805159 + L1ME LINE L1 5499 5758 -363 444 118 0 0 chr17 69699466 69699534 -19805019 + (CA)n Simple_repeat Simple_repeat 2 69 0 184 245 0 41 chr17 69699557 69699606 -19804947 - MER5B DNA MER1_type -103 75 29 2134 141 0 3 chr17 69699606 69699919 -19804634 - AluSx SINE Alu 0 312 1 1817 142 3 66 chr17 69700022 69700340 -19804213 - AluJo SINE Alu -11 301 4 211 356 92 23 chr17 69700416 69700503 -19804050 - L2 LINE L2 -27 3245 3153 2387 76 13 28 chr17 69700503 69700820 -19803733 + AluSx SINE Alu 1 312 0 2592 60 0 0 chr17 69700874 69701205 -19803348 + AluY SINE Alu 1 331 0 2086 117 0 27 chr17 69701317 69701616 -19802937 + AluSx SINE Alu 1 291 -21 328 259 88 20 chr17 69701952 69702099 -19802454 + MER103 DNA DNA 3 159 -7 1859 151 16 23 chr17 69702150 69702454 -19802099 + AluJb SINE Alu 1 302 -10 319 303 142 6 chr17 69702543 69702705 -19801848 + MIR SINE MIR 8 191 -71 2460 99 0 0 chr17 69703434 69703746 -19800807 - AluSx SINE Alu 0 312 1 1083 110 0 0 chr17 69703746 69703882 -19800671 - AluSq/x SINE Alu -177 136 1 508 320 64 5 chr17 69704028 69704231 -19800322 - MIR SINE MIR -42 220 6 272 213 49 0 chr17 69704504 69704565 -19799988 - MIR SINE MIR -111 97 34 1802 141 0 12 chr17 69704664 69704920 -19799633 + AluSx SINE Alu 1 253 -59 1296 213 59 37 chr17 69705043 69705418 -19799135 - MLT1D LTR MaLR 0 505 119 2196 79 0 4 chr17 69705418 69705683 -19798870 - AluSq SINE Alu -16 297 34 1296 213 59 37 chr17 69705683 69705715 -19798838 - MLT1D LTR MaLR -386 119 89 685 61 20 0 chr17 69705716 69705815 -19798738 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 279 227 0 40 chr17 69705817 69705892 -19798661 + CT-rich Low_complexity Low_complexity 3 74 0 914 156 14 0 chr17 69705912 69706053 -19798500 - AluJo SINE Alu -169 143 1 268 164 14 110 chr17 69706053 69706080 -19798473 - MLT1D LTR MaLR -543 83 55 1851 171 3 3 chr17 69706080 69706372 -19798181 + AluJb SINE Alu 4 295 -17 268 164 14 110 chr17 69706372 69706417 -19798136 - MLT1D LTR MaLR -571 55 18 780 199 50 77 chr17 69706654 69706809 -19797744 + MER58A DNA MER1_type 9 158 -2262 1637 127 120 11 chr17 69706809 69707076 -19797477 + AluSc SINE Alu 1 296 -13 780 199 50 77 chr17 69707076 69707141 -19797412 + MER58A DNA MER1_type 158 223 -1 1130 225 20 55 chr17 69707225 69707517 -19797036 - L1MEc LINE L1 -5215 1181 905 1805 180 7 0 chr17 69707517 69707811 -19796742 - AluJo SINE Alu -16 296 1 1130 225 20 55 chr17 69707811 69707918 -19796635 - L1MEc LINE L1 -5491 905 796 737 203 16 42 chr17 69707925 69708117 -19796436 + LTR41 LTR ERVL 1 187 -586 2153 127 0 0 chr17 69708539 69708854 -19795699 - AluSx SINE Alu 0 315 1 377 141 22 76 chr17 69708856 69708948 -19795605 - L1MEc LINE L1 -6210 186 100 241 186 186 14 chr17 69708978 69709048 -19795505 - L1MEc LINE L1 -6279 117 36 381 172 0 16 chr17 69709113 69709177 -19795376 - L2 LINE L2 -62 3251 3189 2261 149 78 13 chr17 69709789 69709945 -19794608 - L1MB7 LINE L1 -1 6183 6039 1920 140 3 21 chr17 69709945 69710231 -19794322 + AluJb SINE Alu 1 281 -31 2261 149 78 13 chr17 69710231 69710538 -19794015 - L1MB7 LINE L1 -145 6039 5690 1233 92 0 0 chr17 69710538 69710717 -19793836 + AluSg/x SINE Alu 132 310 0 2235 103 0 26 chr17 69710914 69711216 -19793337 + AluSx SINE Alu 1 294 -18 354 261 37 45 chr17 69711243 69711377 -19793176 - L1MC5 LINE L1 -280 7681 7549 2344 108 32 69 chr17 69711856 69711898 -19792655 - THE1B LTR MaLR 0 364 322 2156 131 0 0 chr17 69711898 69712203 -19792350 + AluSx SINE Alu 1 305 -7 2344 108 32 69 chr17 69712203 69712538 -19792015 - THE1B LTR MaLR -42 322 1 2132 120 7 3 chr17 69713175 69713474 -19791079 - AluSq SINE Alu -13 300 1 213 94 0 0 chr17 69713548 69713580 -19790973 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 429 250 58 0 chr17 69713580 69713684 -19790869 - L2 LINE L2 -13 3259 3150 2330 153 69 15 chr17 69713813 69714218 -19790335 + MSTA LTR MaLR 2 428 0 1633 152 35 111 chr17 69714530 69714925 -19789628 - MLT1A1 LTR MaLR 0 365 1 2251 107 0 7 chr17 69714985 69715283 -19789270 + AluSx SINE Alu 1 296 -16 280 238 30 40 chr17 69715340 69715441 -19789112 - MIR SINE MIR -57 205 106 182 274 85 66 chr17 69715619 69715725 -19788828 + MER5B DNA MER1_type 42 149 -29 1665 127 20 16 chr17 69716513 69716635 -19787918 - AluJo SINE Alu -59 253 133 2187 131 6 6 chr17 69716635 69716947 -19787606 - AluSx SINE Alu 0 312 1 1665 127 20 16 chr17 69716947 69717076 -19787477 - AluJo SINE Alu -179 133 1 334 258 169 80 chr17 69717165 69717390 -19787163 - MIR SINE MIR -12 250 6 228 244 181 31 chr17 69717451 69717578 -19786975 - L1MB7 LINE L1 -401 5720 5575 351 223 131 23 chr17 69717595 69717725 -19786828 + L1MC5 LINE L1 7609 7752 -209 2372 101 0 0 chr17 69717868 69718166 -19786387 - AluSx SINE Alu 0 312 15 893 135 0 0 chr17 69718174 69718300 -19786253 - AluSg/x SINE Alu -15 297 172 2136 126 3 0 chr17 69718577 69718592 -19785961 - AluSq SINE Alu -10 303 290 207 0 0 0 chr17 69718592 69718615 -19785938 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2136 126 3 0 chr17 69718615 69718901 -19785652 - AluSq SINE Alu -23 290 1 1563 153 16 86 chr17 69718984 69719298 -19785255 - AluJb SINE Alu -20 292 1 270 56 0 0 chr17 69719493 69719529 -19785024 + (CA)n Simple_repeat Simple_repeat 2 37 0 2149 128 7 0 chr17 69719948 69720254 -19784299 + AluJo SINE Alu 1 308 -4 243 0 0 0 chr17 69721228 69721255 -19783298 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1857 141 0 11 chr17 69721274 69721550 -19783003 - AluJb SINE Alu -39 273 1 1823 161 3 43 chr17 69721633 69721956 -19782597 - AluJb SINE Alu 0 312 3 2128 113 7 0 chr17 69722282 69722593 -19781960 - AluSx SINE Alu 0 313 1 852 247 98 66 chr17 69722624 69723062 -19781491 - L2 LINE L2 -1358 1956 1505 192 359 0 0 chr17 69723062 69723126 -19781427 - L2 LINE L2 -2044 1270 1207 419 245 160 72 chr17 69723130 69723461 -19781092 - L2 LINE L2 -698 2616 2257 325 294 118 25 chr17 69723571 69723690 -19780863 + L2 LINE L2 3143 3272 0 284 244 0 77 chr17 69723942 69724020 -19780533 + MIR SINE MIR 58 129 -79 2110 134 3 7 chr17 69724021 69724328 -19780225 - AluSg SINE Alu -2 308 3 2395 96 0 0 chr17 69724434 69724735 -19779818 - AluSx SINE Alu -11 301 1 211 260 0 20 chr17 69725287 69725337 -19779216 - MIR3 SINE MIR -51 157 109 2134 118 10 10 chr17 69725360 69725666 -19778887 - AluSx SINE Alu -6 306 1 665 254 163 42 chr17 69725718 69726123 -19778430 - MLT1H1 LTR MaLR -6 549 96 2094 246 30 13 chr17 69726132 69726657 -19777896 - MLT1F LTR MaLR -8 534 1 256 229 42 42 chr17 69726657 69726750 -19777803 - MLT1H1 LTR MaLR -460 95 3 1163 118 0 12 chr17 69726870 69727031 -19777522 + AluSg/x SINE Alu 140 298 -12 435 316 145 16 chr17 69727755 69727948 -19776605 - MIR SINE MIR -12 250 33 2453 109 0 0 chr17 69730292 69730603 -19773950 - AluSx SINE Alu -1 311 1 230 354 69 20 chr17 69730608 69730854 -19773699 + L2 LINE L2 1813 2070 -1244 211 299 178 46 chr17 69730910 69731084 -19773469 + L2 LINE L2 3069 3265 -7 1903 154 7 10 chr17 69731214 69731513 -19773040 + AluJo SINE Alu 1 298 -14 802 146 0 16 chr17 69731921 69732044 -19772509 + FLAM_C SINE Alu 2 122 -11 625 309 16 16 chr17 69732063 69732254 -19772299 + MIR SINE MIR 56 246 -16 1527 88 0 62 chr17 69732265 69732491 -19772062 + AluSx SINE Alu 1 212 -100 585 94 0 52 chr17 69732543 69732639 -19771914 + AluSx SINE Alu 211 301 -9 462 262 98 30 chr17 69733762 69733926 -19770627 + MER5A DNA MER1_type 14 188 -1 323 200 35 35 chr17 69734127 69734212 -19770341 + MIR3 SINE MIR 89 173 -35 2424 65 0 0 chr17 69734223 69734513 -19770040 + AluSc SINE Alu 1 290 -19 203 133 0 96 chr17 69735026 69735109 -19769444 + (CGGGG)n Simple_repeat Simple_repeat 3 77 0 31 26 0 0 chr17 69737058 69737096 -19767457 + AT_rich Low_complexity Low_complexity 1 38 0 599 265 60 20 chr17 69737699 69737899 -19766654 - MIR SINE MIR -35 227 20 677 231 0 8 chr17 69737902 69738032 -19766521 + FLAM_C SINE Alu 1 129 -4 405 200 64 36 chr17 69738290 69738400 -19766153 + MIR SINE MIR 39 151 -111 292 247 70 44 chr17 69738405 69738563 -19765990 + MER104 DNA Tc2 5 166 -14 185 275 29 58 chr17 69739120 69739189 -19765364 + MIR3 SINE MIR 1 67 -141 2209 86 43 0 chr17 69739328 69739608 -19764945 + AluSx SINE Alu 5 296 -16 604 229 141 26 chr17 69739810 69740002 -19764551 - MIR SINE MIR -3 259 46 2673 191 50 16 chr17 69740012 69740160 -19764393 - Tigger7 DNA MER2_type -40 2547 2406 2259 111 3 3 chr17 69740160 69740458 -19764095 + AluSx SINE Alu 1 298 -14 2673 191 50 16 chr17 69740458 69740960 -19763593 - Tigger7 DNA MER2_type -181 2406 2 500 243 64 101 chr17 69741586 69741804 -19762749 - L2 LINE L2 -6 3307 3098 219 184 53 11 chr17 69742012 69742083 -19762470 + MIR SINE MIR 87 158 -50 251 241 45 45 chr17 69742798 69742910 -19761643 - L1MC5 LINE L1 -52 7909 7798 1664 192 3 13 chr17 69743207 69743514 -19761039 + AluJo SINE Alu 1 304 -8 352 224 80 72 chr17 69743825 69743950 -19760603 + MER3 DNA MER1_type 84 209 0 578 325 69 48 chr17 69744658 69744907 -19759646 + L2 LINE L2 2463 2705 -608 1727 131 22 88 chr17 69744907 69745227 -19759326 + AluJo SINE Alu 1 299 -13 578 325 69 48 chr17 69745227 69745687 -19758866 + L2 LINE L2 2705 3312 -1 1605 141 76 41 chr17 69745756 69746046 -19758507 + AluJo SINE Alu 1 300 -12 1948 140 10 32 chr17 69747383 69747691 -19756862 + AluJb SINE Alu 3 303 -9 1980 133 0 0 chr17 69749312 69749606 -19754947 - AluSx SINE Alu -5 307 14 2076 100 29 26 chr17 69751075 69751384 -19753169 - AluSx SINE Alu -2 310 1 2010 105 7 3 chr17 69751827 69752113 -19752440 + AluSg SINE Alu 1 287 -23 2314 91 0 0 chr17 69754265 69754563 -19749990 + AluSg SINE Alu 1 298 -12 2334 78 0 0 chr17 69755145 69755440 -19749113 + AluSg SINE Alu 1 295 -15 792 165 8 8 chr17 69755440 69755568 -19748985 - AluJo/FLAM SINE Alu -174 128 1 486 250 204 35 chr17 69756284 69756439 -19748114 - L2 LINE L2 0 3313 3186 1730 155 10 7 chr17 69756439 69756730 -19747823 + AluJo SINE Alu 1 292 -20 486 250 204 35 chr17 69756730 69756834 -19747719 - L2 LINE L2 -127 3186 3010 434 273 109 48 chr17 69757708 69757873 -19746680 - MIR SINE MIR -68 194 20 279 0 0 0 chr17 69758107 69758138 -19746415 + (CA)n Simple_repeat Simple_repeat 2 32 0 2314 100 0 0 chr17 69758467 69758778 -19745775 - AluSx SINE Alu -1 311 1 446 271 164 6 chr17 69759237 69759414 -19745139 + MIR SINE MIR 52 256 -6 2461 102 47 8 chr17 69759560 69759921 -19744632 + THE1C LTR MaLR 1 375 0 2101 110 3 0 chr17 69760052 69760352 -19744201 - AluSg SINE Alu -9 301 1 865 311 102 37 chr17 69760534 69761268 -19743285 + L2 LINE L2 2286 3069 -244 826 207 33 0 chr17 69761678 69761828 -19742725 + MER2 DNA MER2_type 2 156 -189 1411 113 117 8 chr17 69761829 69762068 -19742485 - AluJo SINE Alu -24 288 24 750 200 135 10 chr17 69762079 69762279 -19742274 + MER2 DNA MER2_type 121 345 0 449 238 145 34 chr17 69763052 69763287 -19741266 + MIR SINE MIR 2 262 0 193 193 55 138 chr17 69763648 69763757 -19740796 - MIR SINE MIR -32 230 131 2220 98 0 3 chr17 69764775 69765080 -19739473 - AluSg SINE Alu -6 304 1 554 262 64 43 chr17 69766486 69766673 -19737880 - MIR SINE MIR -57 205 15 301 271 37 37 chr17 69767568 69767675 -19736878 - MIR3 SINE MIR 0 208 102 263 305 0 0 chr17 69768205 69768264 -19736289 + (CA)n Simple_repeat Simple_repeat 2 60 0 420 269 54 24 chr17 69768794 69768961 -19735592 + L1MC4a LINE L1 5106 5277 -869 440 291 191 30 chr17 69768979 69769400 -19735153 + L1MC4a LINE L1 5322 5716 -405 378 0 0 0 chr17 69769400 69769442 -19735111 + (TG)n Simple_repeat Simple_repeat 2 43 0 440 291 191 30 chr17 69769442 69769528 -19735025 + L1MC4a LINE L1 5716 5787 -334 3602 113 10 2 chr17 69769630 69770125 -19734428 + MER1A DNA MER1_type 1 499 -30 270 224 139 81 chr17 69770249 69770472 -19734081 + L1ME LINE L1 5629 5864 -257 409 294 86 24 chr17 69770480 69770667 -19733886 - MIR SINE MIR -10 252 55 2243 90 0 0 chr17 69771127 69771426 -19733127 - AluSc SINE Alu -10 299 1 34 0 0 0 chr17 69771485 69771519 -19733034 + AT_rich Low_complexity Low_complexity 1 34 0 230 205 111 34 chr17 69771668 69771785 -19732768 - L1P4 LINE L1 -712 5454 5329 350 222 19 10 chr17 69771971 69772082 -19732471 + L1MD3 LINE L1 6268 7980 -1 2125 132 0 0 chr17 69772354 69772664 -19731889 + AluSx SINE Alu 1 310 -2 823 158 0 22 chr17 69773062 69773201 -19731352 - FLAM_C SINE Alu -6 137 2 1500 107 0 5 chr17 69774443 69774658 -19729895 + AluSq SINE Alu 89 302 -11 183 129 0 0 chr17 69774983 69775014 -19729539 + (A)n Simple_repeat Simple_repeat 1 31 0 423 181 21 32 chr17 69775732 69775826 -19728727 - AluJo SINE Alu -178 134 42 2248 95 3 0 chr17 69775828 69776133 -19728420 - AluSc SINE Alu -3 306 1 4975 124 76 19 chr17 69776189 69777010 -19727543 - L1MB2 LINE L1 -2 6169 5292 6528 82 12 2 chr17 69777010 69778189 -19726364 - L1PA10 LINE L1 -11 6157 4969 4975 124 76 19 chr17 69778189 69778265 -19726288 - L1MB2 LINE L1 -879 5292 5222 1147 177 173 19 chr17 69778265 69778525 -19726028 - MLT1D LTR MaLR -185 320 21 405 0 0 0 chr17 69778818 69778863 -19725690 + (TTTTA)n Simple_repeat Simple_repeat 3 47 0 1926 135 0 0 chr17 69778865 69779146 -19725407 - AluSx SINE Alu -29 283 3 365 342 84 47 chr17 69779197 69779519 -19725034 - L1MEd LINE L1 -5306 813 480 1593 154 4 14 chr17 69779742 69780021 -19724532 + AluSx SINE Alu 8 283 -29 221 0 35 0 chr17 69780031 69780060 -19724493 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1127 248 69 65 chr17 69780535 69780709 -19723844 + L2 LINE L2 2832 3004 -309 1648 159 15 0 chr17 69780709 69780980 -19723573 - AluJb SINE Alu -3 309 35 1127 248 69 65 chr17 69780980 69781284 -19723269 + L2 LINE L2 3004 3312 -1 385 228 44 70 chr17 69781277 69781391 -19723162 - MIR3 SINE MIR -16 192 82 * 24 0 0 0 chr17 69781474 69781498 -19723055 + AT_rich Low_complexity Low_complexity 1 24 0 1972 131 0 0 chr17 69781917 69782229 -19722324 + AluSx SINE Alu 1 312 0 2239 81 3 0 chr17 69782570 69782865 -19721688 - AluSx SINE Alu -16 296 1 22 35 0 0 chr17 69783101 69783130 -19721423 + AT_rich Low_complexity Low_complexity 1 29 0 246 310 35 11 chr17 69783457 69783544 -19721009 + L2 LINE L2 3214 3302 -11 1284 112 0 0 chr17 69783550 69783719 -19720834 + AluSx SINE Alu 1 169 -143 2228 88 0 0 chr17 69784336 69784642 -19719911 + AluSg SINE Alu 1 306 0 335 240 115 10 chr17 69784886 69784982 -19719571 + L2 LINE L2 3197 3302 -11 2231 95 7 0 chr17 69784988 69785282 -19719271 + AluSg SINE Alu 1 296 -14 2258 107 0 0 chr17 69786210 69786520 -19718033 - AluSg SINE Alu 0 310 1 1882 119 3 59 chr17 69786522 69786842 -19717711 - AluSx SINE Alu -10 302 1 257 107 0 18 chr17 69787413 69787469 -19717084 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 843 189 85 0 chr17 69787531 69787684 -19716869 + FAM SINE Alu 1 166 -9 262 304 22 0 chr17 69787744 69787836 -19716717 + GA-rich Low_complexity Low_complexity 1 94 0 2151 91 7 13 chr17 69787868 69788166 -19716387 + AluSx SINE Alu 1 296 -16 835 150 0 27 chr17 69788166 69788313 -19716240 + FLAM_C SINE Alu 1 143 0 239 246 49 0 chr17 69788466 69788527 -19716026 - MIR3 SINE MIR -2 206 143 589 206 103 0 chr17 69788532 69788678 -19715875 + MLT1C LTR MaLR 6 166 -301 2091 103 0 3 chr17 69788678 69788970 -19715583 - AluSx SINE Alu -18 294 4 618 192 49 136 chr17 69788978 69789113 -19715440 - L1MC4 LINE L1 0 8042 7897 204 97 0 0 chr17 69789113 69789144 -19715409 + (CA)n Simple_repeat Simple_repeat 2 32 0 618 192 49 136 chr17 69789144 69789169 -19715384 - L1MC4 LINE L1 -145 7897 7871 1711 166 3 3 chr17 69789169 69789458 -19715095 + AluJb SINE Alu 1 289 -23 2211 86 3 0 chr17 69789465 69789757 -19714796 + AluSx SINE Alu 1 293 -19 618 192 49 136 chr17 69789757 69789895 -19714658 - L1MC4 LINE L1 -177 7865 7762 1816 160 3 3 chr17 69789896 69790190 -19714363 + AluJb SINE Alu 1 294 -18 528 147 20 0 chr17 69790294 69790396 -19714157 + AluSp/q SINE Alu 198 301 -12 1961 123 31 0 chr17 69790705 69790998 -19713555 - AluSx SINE Alu -10 302 1 515 155 0 0 chr17 69792275 69792359 -19712194 - AluSg/x SINE Alu -23 286 203 260 274 179 19 chr17 69792547 69792653 -19711900 + MIR3 SINE MIR 42 164 -44 1301 301 14 98 chr17 69792667 69793053 -19711500 + L1MB4 LINE L1 5789 6137 -43 2284 71 0 3 chr17 69793053 69793348 -19711205 + AluSg SINE Alu 1 294 -16 1301 301 14 98 chr17 69793348 69793389 -19711164 + L1MB4 LINE L1 6137 6180 0 1779 170 0 19 chr17 69793400 69793718 -19710835 + AluSx SINE Alu 1 312 0 487 293 126 0 chr17 69794877 69795068 -19709485 - MIR SINE MIR -19 243 29 216 268 73 98 chr17 69795269 69795392 -19709161 - MIR SINE MIR -70 192 73 362 331 24 8 chr17 69796319 69796443 -19708110 + MIR SINE MIR 20 145 -63 704 145 60 0 chr17 69797902 69798019 -19706534 - AluSg/x SINE Alu -8 304 181 513 117 0 0 chr17 69798019 69798096 -19706457 - AluSg/x SINE Alu -69 241 165 1672 110 0 0 chr17 69998096 69998305 -19506248 - AluSq SINE Alu -104 209 1 274 242 50 30 chr17 69998331 69998430 -19506123 - MER5A DNA MER1_type -85 104 4 591 348 117 53 chr17 69998436 69998651 -19505902 - L3 LINE CR1 -160 1417 1217 1944 128 57 10 chr17 69998651 69998949 -19505604 - AluSx SINE Alu 0 312 1 591 348 117 53 chr17 69998949 69999282 -19505271 - L3 LINE CR1 -360 1217 834 1471 116 0 0 chr17 69999426 69999615 -19504938 - AluSq SINE Alu -124 189 1 2030 101 87 0 chr17 69999729 70000005 -19504548 - AluSc SINE Alu -9 300 1 1455 159 4 4 chr17 70000896 70001123 -19503430 + AluJb SINE Alu 71 297 -15 226 226 48 0 chr17 70001125 70001187 -19503366 + L1ME3A LINE L1 6101 6165 -5 1033 192 0 0 chr17 70001287 70001464 -19503089 - AluSg/x SINE Alu -5 305 129 583 292 99 16 chr17 70001464 70001707 -19502846 + L2 LINE L2 2862 3124 -189 693 255 7 0 chr17 70001709 70001862 -19502691 - MLT1A1 LTR MaLR -41 324 171 646 215 99 21 chr17 70001862 70002053 -19502500 + L2 LINE L2 3107 3312 -1 2266 115 3 3 chr17 70002071 70002383 -19502170 + AluSx SINE Alu 1 312 0 579 138 0 0 chr17 70002495 70002575 -19501978 + AluSg/x SINE Alu 209 288 -21 988 232 61 11 chr17 70002894 70003018 -19501535 + AluJo SINE Alu 1 117 -195 180 0 0 0 chr17 70003018 70003038 -19501515 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 988 232 61 11 chr17 70003038 70003176 -19501377 + AluJo SINE Alu 117 276 -36 2228 121 16 0 chr17 70003279 70003586 -19500967 + AluSx SINE Alu 1 312 0 659 196 128 7 chr17 70003631 70003779 -19500774 - AluJb SINE Alu -8 304 139 180 0 0 0 chr17 70003977 70003997 -19500556 + (A)n Simple_repeat Simple_repeat 1 20 0 231 103 0 0 chr17 70004332 70004371 -19500182 + (CA)n Simple_repeat Simple_repeat 1 39 0 1971 119 30 10 chr17 70005146 70005441 -19499112 - AluSq SINE Alu -12 301 1 2164 104 7 0 chr17 70005916 70006231 -19498322 + AluSg SINE Alu 1 317 0 2278 121 0 3 chr17 70006665 70007079 -19497474 - AluSx SINE Alu 0 413 1 2323 64 16 45 chr17 70007370 70007681 -19496872 - AluY SINE Alu -9 302 1 414 0 0 0 chr17 70007895 70007941 -19496612 + (CA)n Simple_repeat Simple_repeat 2 47 0 1910 125 6 56 chr17 70008310 70008631 -19495922 + AluJb SINE Alu 1 305 -7 224 52 17 69 chr17 70009253 70009311 -19495242 + (CCCCG)n Simple_repeat Simple_repeat 5 59 0 243 191 16 0 chr17 70009490 70009553 -19495000 + (CGG)n Simple_repeat Simple_repeat 1 64 0 193 106 21 21 chr17 70009732 70009779 -19494774 + (CCG)n Simple_repeat Simple_repeat 1 47 0 21 57 0 0 chr17 70009840 70009875 -19494678 + GC_rich Low_complexity Low_complexity 1 35 0 816 204 181 43 chr17 70012022 70012044 -19492509 + MLT1H LTR MaLR 195 213 -336 2356 96 0 3 chr17 70012044 70012347 -19492206 - AluSx SINE Alu -10 302 1 816 204 181 43 chr17 70012347 70012623 -19491930 + MLT1H LTR MaLR 213 534 -15 1812 166 36 0 chr17 70012672 70012973 -19491580 - AluJo SINE Alu 0 312 1 1027 167 0 0 chr17 70012975 70013131 -19491422 - FRAM SINE Alu -10 156 1 488 295 36 0 chr17 70013234 70013400 -19491153 + MIR SINE MIR 8 179 -83 739 272 72 72 chr17 70013415 70013654 -19490899 + MLT1L LTR MaLR 15 253 -362 2082 152 0 7 chr17 70013654 70013963 -19490590 + AluJo SINE Alu 1 307 -5 739 272 72 72 chr17 70013963 70014234 -19490319 + MLT1L LTR MaLR 252 525 -90 2165 123 0 7 chr17 70014235 70014543 -19490010 + AluSx SINE Alu 1 306 -6 223 179 196 0 chr17 70014583 70014639 -19489914 + MIR SINE MIR 185 251 -11 1121 164 70 0 chr17 70014786 70014987 -19489566 + MER58A DNA MER1_type 1 215 -9 2246 118 3 3 chr17 70015048 70015345 -19489208 + AluSx SINE Alu 1 297 -15 1859 131 4 0 chr17 70015450 70015702 -19488851 - AluSq SINE Alu -60 253 1 1322 220 67 62 chr17 70015719 70016065 -19488488 + L1MC4 LINE L1 6640 6990 -1052 2369 108 0 0 chr17 70016065 70016361 -19488192 - AluSx SINE Alu -14 298 3 1322 220 67 62 chr17 70016361 70016450 -19488103 + L1MC4 LINE L1 6990 7077 -965 398 245 41 0 chr17 70017217 70017315 -19487238 + MIR SINE MIR 77 178 -84 1141 108 0 32 chr17 70017440 70017598 -19486955 + AluSg/x SINE Alu 154 306 -4 1532 148 95 27 chr17 70017617 70017906 -19486647 + AluJo SINE Alu 4 310 0 2209 116 3 0 chr17 70017906 70018200 -19486353 + AluSx SINE Alu 1 295 -17 2290 78 0 0 chr17 70018446 70018766 -19485787 + AluSg SINE Alu 1 320 0 2086 102 0 4 chr17 70018987 70019261 -19485292 - AluSg SINE Alu -37 273 1 186 191 71 0 chr17 70019368 70019410 -19485143 - L3 LINE CR1 -592 985 941 480 209 191 0 chr17 70019474 70019589 -19484964 + MER5A DNA MER1_type 1 137 -52 775 174 8 0 chr17 70019839 70019971 -19484582 + FLAM_C SINE Alu 1 133 0 909 114 76 33 chr17 70020390 70020574 -19483979 + MER33 DNA MER1_type 31 222 -102 1562 197 9 25 chr17 70020574 70020889 -19483664 + AluSq SINE Alu 1 310 -3 320 196 10 82 chr17 70020894 70020991 -19483562 + L1MC4 LINE L1 6614 6703 -1339 203 89 0 71 chr17 70020997 70021053 -19483500 + (TA)n Simple_repeat Simple_repeat 1 52 0 284 175 0 0 chr17 70021073 70021130 -19483423 + MER33 DNA MER1_type 268 324 0 217 274 36 60 chr17 70021424 70021485 -19483068 + L3 LINE CR1 1477 1537 -40 1826 182 71 36 chr17 70021485 70021637 -19482916 + MLT1C LTR MaLR 1 146 -321 2273 117 7 0 chr17 70021637 70021937 -19482616 - AluSx SINE Alu -10 302 1 1826 182 71 36 chr17 70021937 70022234 -19482319 + MLT1C LTR MaLR 146 466 -1 217 274 36 60 chr17 70022234 70022256 -19482297 + L3 LINE CR1 1537 1558 -19 1579 196 7 20 chr17 70023240 70023536 -19481017 + AluJb SINE Alu 5 296 -16 1276 149 5 11 chr17 70024024 70024244 -19480309 - MLT1D LTR MaLR -46 459 248 2245 98 0 17 chr17 70024255 70024552 -19480001 - AluSx SINE Alu -20 292 1 915 124 96 34 chr17 70024555 70024732 -19479821 + MER5A DNA MER1_type 2 189 0 406 309 119 6 chr17 70024736 70024904 -19479649 - MER5A DNA MER1_type -1 188 2 218 231 15 0 chr17 70024941 70025006 -19479547 + CT-rich Low_complexity Low_complexity 4 69 0 231 264 69 46 chr17 70025060 70025130 -19479423 + L2 LINE L2 3184 3258 -14 2064 117 0 3 chr17 70025130 70025413 -19479140 + AluSx SINE Alu 15 296 -16 231 264 69 46 chr17 70025413 70025429 -19479124 + L2 LINE L2 3258 3272 0 375 78 0 0 chr17 70025796 70025847 -19478706 + (TG)n Simple_repeat Simple_repeat 2 52 0 757 206 7 26 chr17 70025851 70026006 -19478547 - AluJb SINE Alu -41 271 120 2343 109 3 0 chr17 70026007 70026346 -19478207 - AluSp SINE Alu 0 340 1 2365 90 0 19 chr17 70026478 70026788 -19477765 - AluSx SINE Alu -8 304 1 1808 158 25 54 chr17 70026788 70027105 -19477448 - AluJb SINE Alu -4 308 1 193 254 73 0 chr17 70027506 70027561 -19476992 + L2 LINE L2 3251 3309 -4 2191 97 19 19 chr17 70027587 70027896 -19476657 - AluSx SINE Alu -3 309 1 261 258 24 32 chr17 70028252 70028376 -19476177 + L1M4 LINE L1 3912 4034 -2112 309 75 0 0 chr17 70028376 70028416 -19476137 - Alu SINE Alu -261 40 1 1719 166 25 54 chr17 70028416 70028730 -19475823 - AluJb SINE Alu -7 305 1 305 147 0 15 chr17 70029141 70029209 -19475344 + (GA)n Simple_repeat Simple_repeat 1 67 0 2059 239 77 58 chr17 70029377 70029857 -19474696 + L1M4 LINE L1 2769 3238 -2908 2412 101 0 3 chr17 70029857 70030165 -19474388 + AluSx SINE Alu 6 312 0 2059 239 77 58 chr17 70030165 70030443 -19474110 + L1M4 LINE L1 3238 3509 -2637 2158 87 14 4 chr17 70030443 70030753 -19473800 + AluSc SINE Alu 1 313 0 2059 239 77 58 chr17 70030753 70030766 -19473787 + L1M4 LINE L1 3509 3520 -2626 2284 99 0 3 chr17 70030766 70031058 -19473495 + AluSc SINE Alu 2 292 -17 2059 239 77 58 chr17 70031058 70031446 -19473107 + L1M4 LINE L1 3520 3954 -2192 189 0 0 0 chr17 70031557 70031578 -19472975 + (TC)n Simple_repeat Simple_repeat 2 22 0 1901 151 3 3 chr17 70031578 70031863 -19472690 - AluJo SINE Alu -27 285 1 1974 128 14 20 chr17 70032333 70032629 -19471924 - AluSx SINE Alu -17 295 2 351 178 79 40 chr17 70032765 70032866 -19471687 - MER89 LTR ERV1 -133 426 322 2301 115 0 0 chr17 70032902 70033207 -19471346 - AluSc SINE Alu -4 305 1 310 301 24 41 chr17 70033628 70033751 -19470802 - L1ME4a LINE L1 -164 5957 5837 1519 221 7 0 chr17 70033883 70034181 -19470372 + AluJo SINE Alu 1 300 -12 218 136 23 0 chr17 70034182 70034226 -19470327 + (TA)n Simple_repeat Simple_repeat 1 45 0 550 242 51 74 chr17 70034238 70034281 -19470272 - L1ME4a LINE L1 -287 5834 5792 2214 103 0 23 chr17 70034281 70034583 -19469970 + AluSq SINE Alu 1 295 -18 550 242 51 74 chr17 70034583 70034699 -19469854 - L1ME4a LINE L1 -329 5792 5675 1903 145 86 17 chr17 70034699 70035050 -19469503 - THE1C LTR MaLR 0 375 1 550 242 51 74 chr17 70035050 70035156 -19469397 - L1ME4a LINE L1 -446 5675 5557 2144 115 37 0 chr17 70035878 70036173 -19468380 - AluSx SINE Alu -6 306 1 2555 56 0 38 chr17 70036180 70036500 -19468053 - AluY SINE Alu -3 308 1 2246 127 0 0 chr17 70036500 70036798 -19467755 - AluSx SINE Alu -13 299 1 1232 94 0 6 chr17 70036803 70036973 -19467580 - AluY SINE Alu -8 303 135 199 256 103 51 chr17 70037012 70037090 -19467463 + MIR3 SINE MIR 118 199 -9 1588 173 6 38 chr17 70037105 70037418 -19467135 + AluSq SINE Alu 1 303 -10 1128 86 0 0 chr17 70037864 70038004 -19466549 - AluSg1 SINE Alu -168 141 2 330 300 47 29 chr17 70038019 70038189 -19466364 - HERV16 LTR ERVL -991 4773 4601 1937 110 3 57 chr17 70038307 70038645 -19465908 - AluSx SINE Alu 0 322 1 251 317 42 14 chr17 70038681 70038823 -19465730 - HERV16 LTR ERVL -4071 925 780 1628 83 8 79 chr17 70039236 70039490 -19465063 - AluSp SINE Alu -16 297 62 512 234 18 24 chr17 70039625 70039774 -19464779 + MIR SINE MIR 1 148 -60 2482 77 0 13 chr17 70040053 70040364 -19464189 - AluSx SINE Alu -5 307 1 2201 108 0 45 chr17 70041296 70041610 -19462943 - AluSx SINE Alu -12 300 1 2027 165 0 13 chr17 70041807 70042123 -19462430 - AluJb SINE Alu 0 312 1 431 287 118 7 chr17 70042135 70042271 -19462282 - MIR3 SINE MIR -54 154 4 926 171 116 0 chr17 70042340 70042556 -19461997 - L1MC3 LINE L1 -528 7257 7017 2203 103 17 3 chr17 70042614 70042906 -19461647 - AluSq SINE Alu -15 298 3 186 0 0 39 chr17 70042932 70042958 -19461595 + (TTTTG)n Simple_repeat Simple_repeat 1 140 0 2198 107 4 0 chr17 70042958 70043239 -19461314 - AluSq SINE Alu -31 282 1 2101 124 0 0 chr17 70043244 70043517 -19461036 - AluSx SINE Alu -21 291 19 182 203 27 40 chr17 70043994 70044068 -19460485 + L3 LINE CR1 1143 1215 -362 467 277 9 0 chr17 70044319 70044431 -19460122 - MER81 DNA DNA 0 114 2 2056 95 61 7 chr17 70045435 70045730 -19458823 + AluSx SINE Alu 1 311 -1 2122 124 0 0 chr17 70045730 70046029 -19458524 + AluSx SINE Alu 3 301 -11 2177 261 31 51 chr17 70046865 70047585 -19456968 - L2 LINE L2 0 3313 2616 2006 119 33 0 chr17 70047585 70047887 -19456666 + AluSx SINE Alu 1 312 0 2177 261 31 51 chr17 70047887 70048270 -19456283 - L2 LINE L2 -697 2616 2227 349 312 0 0 chr17 70048355 70048448 -19456105 + L2 LINE L2 2691 2783 -531 1664 124 0 0 chr17 70048489 70048722 -19455831 + AluSq SINE Alu 1 233 -80 1584 75 0 0 chr17 70049008 70049208 -19455345 - AluSg/x SINE Alu -22 287 88 1646 95 27 46 chr17 70049208 70049471 -19455082 + AluSx SINE Alu 28 285 -27 1243 89 0 22 chr17 70050191 70050371 -19454182 - AluSq SINE Alu -4 309 134 2083 110 7 0 chr17 70050371 70050670 -19453883 - AluSx SINE Alu -11 301 1 1137 103 0 7 chr17 70051239 70051394 -19453159 + AluSq SINE Alu 1 154 -159 627 111 0 10 chr17 70051398 70051497 -19453056 + AluSg/x SINE Alu 213 310 0 224 209 0 75 chr17 70052515 70052582 -19451971 + MIR SINE MIR 7 68 -194 756 165 0 8 chr17 70052729 70052850 -19451703 - FLAM_C SINE Alu -23 120 1 2201 111 3 0 chr17 70053675 70053982 -19450571 - AluSp SINE Alu -5 308 1 824 222 16 6 chr17 70054145 70054436 -19450117 + CT-rich Low_complexity Low_complexity 1 293 0 300 239 69 62 chr17 70054455 70054585 -19449968 - L1ME4a LINE L1 -2 6119 5989 2304 109 0 0 chr17 70054805 70055117 -19449436 - AluSx SINE Alu 0 312 1 2056 111 16 3 chr17 70055150 70055456 -19449097 - AluSg SINE Alu 0 310 1 186 43 0 0 chr17 70056429 70056452 -19448101 + (TA)n Simple_repeat Simple_repeat 2 24 0 2055 115 7 0 chr17 70057275 70057570 -19446983 - AluSq SINE Alu -16 297 1 1156 159 13 48 chr17 70057593 70057657 -19446896 + MER20 DNA MER1_type 1 66 -153 2279 91 0 0 chr17 70057657 70057954 -19446599 - AluSq SINE Alu -16 297 1 1156 159 13 48 chr17 70057954 70058116 -19446437 + MER20 DNA MER1_type 66 219 0 438 169 0 0 chr17 70058694 70058759 -19445794 - AluJ/FLAM SINE Alu -243 69 5 1987 119 17 7 chr17 70058772 70059067 -19445486 - AluSx SINE Alu -14 298 1 2026 116 3 0 chr17 70059352 70059644 -19444909 - AluSx SINE Alu -19 293 1 289 217 0 109 chr17 70059674 70059710 -19444843 - L1ME3 LINE L1 -29 6133 6095 1684 163 28 0 chr17 70059710 70059993 -19444560 - AluSx SINE Alu -21 291 1 289 217 0 109 chr17 70059993 70060048 -19444505 - L1ME3 LINE L1 -67 6095 6052 9842 52 16 8 chr17 70060149 70061431 -19443122 + SVA Other Other 94 1386 0 1206 132 0 0 chr17 70061446 70061628 -19442925 + AluSg/x SINE Alu 130 311 -1 328 331 8 8 chr17 70061660 70061787 -19442766 + ERVL LTR ERVL 4807 4933 -831 260 196 0 0 chr17 70061888 70061939 -19442614 + LTR67 LTR ERVL 5 55 -502 1077 135 0 11 chr17 70061991 70062169 -19442384 + AluSg/x SINE Alu 135 310 0 267 309 18 9 chr17 70062324 70062434 -19442119 + LTR67 LTR ERVL 443 553 -4 289 224 0 0 chr17 70062499 70062566 -19441987 + L1ME2 LINE L1 3877 3943 -2203 904 115 0 0 chr17 70062580 70062710 -19441843 + AluSg SINE Alu 1 130 -180 2193 96 0 0 chr17 70062714 70063007 -19441546 + AluSg SINE Alu 1 293 -17 261 321 69 8 chr17 70063048 70063179 -19441374 + L1ME2 LINE L1 3982 4120 -2026 2132 114 7 0 chr17 70063187 70063495 -19441058 + AluSx SINE Alu 1 310 -2 243 133 0 0 chr17 70063498 70063543 -19441010 + L1ME2 LINE L1 4381 4425 -1721 1757 126 3 52 chr17 70063545 70063855 -19440698 + AluJb SINE Alu 1 295 -17 1025 303 123 19 chr17 70063855 70064854 -19439699 + L1ME2 LINE L1 4768 5866 -298 896 142 14 0 chr17 70064874 70065022 -19439531 - AluSg/x SINE Alu -3 309 160 2220 103 3 0 chr17 70065065 70065377 -19439176 - AluSp SINE Alu 0 313 1 204 40 0 0 chr17 70065383 70065408 -19439145 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 3259 151 14 24 chr17 70065435 70066026 -19438527 + L1MB7 LINE L1 5581 6165 -19 1744 128 14 54 chr17 70066348 70066665 -19437888 - AluSx SINE Alu 0 305 1 761 216 37 37 chr17 70066832 70067022 -19437531 + AluJb SINE Alu 123 312 0 246 105 0 0 chr17 70067022 70067060 -19437493 + (GA)n Simple_repeat Simple_repeat 1 38 0 192 77 0 0 chr17 70067054 70067080 -19437473 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 * 2211 109 0 0 chr17 70067091 70067404 -19437149 + AluSq SINE Alu 1 313 0 888 201 0 6 chr17 70067404 70067578 -19436975 + AluJb SINE Alu 134 306 -6 771 176 0 0 chr17 70067789 70067914 -19436639 + FLAM_C SINE Alu 1 125 -8 191 61 30 0 chr17 70067914 70067947 -19436606 + (TA)n Simple_repeat Simple_repeat 2 35 0 797 163 0 22 chr17 70068032 70068167 -19436386 + FLAM_C SINE Alu 2 133 0 1086 169 0 0 chr17 70068808 70068986 -19435567 + L1MD2 LINE L1 5547 5724 -635 310 131 16 98 chr17 70068987 70069048 -19435505 - MLT2B1 LTR ERVL 0 515 459 207 258 39 8 chr17 70069051 70069179 -19435374 + (TA)n Simple_repeat Simple_repeat 2 133 0 494 104 80 0 chr17 70069182 70069345 -19435208 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 1605 143 52 21 chr17 70069350 70069499 -19435054 + AluJb SINE Alu 1 144 -168 1912 143 3 3 chr17 70069499 70069800 -19434753 + AluJb SINE Alu 1 301 -11 1605 143 52 21 chr17 70069800 70069936 -19434617 + AluJb SINE Alu 144 295 -17 1511 240 84 26 chr17 70070002 70070456 -19434097 - MLT2B1 LTR ERVL -40 480 1 1486 201 58 58 chr17 70070456 70070657 -19433896 + L1MD2 LINE L1 5721 5921 -438 2248 87 3 3 chr17 70070657 70070957 -19433596 - AluSc SINE Alu -9 300 1 2166 121 0 0 chr17 70070961 70071268 -19433285 - AluSx SINE Alu -5 307 1 1486 201 58 58 chr17 70071268 70071375 -19433178 + L1MD2 LINE L1 5924 6037 -322 1612 187 3 22 chr17 70071375 70071690 -19432863 - AluJb SINE Alu -3 309 1 1486 201 58 58 chr17 70071690 70071787 -19432766 + L1MD2 LINE L1 6036 6132 -227 585 226 52 0 chr17 70071790 70071905 -19432648 + FRAM SINE Alu 2 122 -54 498 310 95 15 chr17 70071974 70072019 -19432534 - MIR SINE MIR -27 235 195 1723 157 34 0 chr17 70072019 70072313 -19432240 + AluJb SINE Alu 1 304 -8 498 310 95 15 chr17 70072313 70072467 -19432086 - MIR SINE MIR -67 195 20 1878 144 24 0 chr17 70072755 70073047 -19431506 + AluSx SINE Alu 1 299 -13 239 239 11 114 chr17 70073191 70073279 -19431274 + L2 LINE L2 3194 3272 0 801 259 43 63 chr17 70073298 70073646 -19430907 - MER102b DNA MER1_type 0 341 1 631 226 29 0 chr17 70074315 70074556 -19429997 + L1MD3 LINE L1 7493 7827 -168 1938 114 0 44 chr17 70074571 70074927 -19429626 + AluSx SINE Alu 1 343 0 1713 198 0 0 chr17 70074932 70075235 -19429318 + AluSx SINE Alu 1 303 -9 187 53 26 53 chr17 70075545 70075583 -19428970 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 1894 147 3 19 chr17 70075633 70075947 -19428606 + AluJo SINE Alu 1 309 -3 293 109 18 0 chr17 70076178 70076233 -19428320 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 754 271 21 0 chr17 70076310 70076498 -19428055 - MIR SINE MIR -69 193 2 2185 96 7 0 chr17 70076773 70077076 -19427477 - AluSp SINE Alu -8 305 1 761 147 0 0 chr17 70077291 70077407 -19427146 - AluJb SINE Alu -11 301 186 544 140 140 0 chr17 70077518 70077618 -19426935 + FLAM_A SINE Alu 10 123 -19 4301 137 63 23 chr17 70077618 70078415 -19426138 + L1MB7 LINE L1 5324 6152 -32 2007 141 0 0 chr17 70078416 70078722 -19425831 - AluSx SINE Alu -6 306 1 180 0 0 0 chr17 70078773 70078793 -19425760 + (TTA)n Simple_repeat Simple_repeat 1 20 0 342 174 109 22 chr17 70078795 70078887 -19425666 + MER69 DNA AcHobo 2342 2441 -85 873 311 90 45 chr17 70079008 70079586 -19424967 + HAL1 LINE L1 21 624 -1883 1976 119 23 0 chr17 70079589 70079892 -19424661 - AluSx SINE Alu -2 310 1 1898 155 3 0 chr17 70080474 70080778 -19423775 - AluJo SINE Alu -7 305 1 495 273 45 59 chr17 70080825 70081045 -19423508 - MIR SINE MIR -45 217 1 1492 131 0 0 chr17 70081516 70081730 -19422823 + AluSq SINE Alu 9 222 -91 183 80 0 0 chr17 70081831 70081856 -19422697 + (A)n Simple_repeat Simple_repeat 1 25 0 546 222 103 0 chr17 70081856 70081973 -19422580 - MLT1G1 LTR MaLR -37 558 430 225 0 0 0 chr17 70082174 70082199 -19422354 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1977 129 0 0 chr17 70082202 70082482 -19422071 - AluSx SINE Alu -32 280 1 1831 124 59 7 chr17 70082681 70082971 -19421582 - AluSx SINE Alu -7 305 1 673 182 118 35 chr17 70083162 70083332 -19421221 + MER5A DNA MER1_type 3 186 -3 317 141 28 70 chr17 70083683 70083754 -19420799 - MLT1K LTR MaLR -12 576 509 259 213 0 80 chr17 70083687 70083762 -19420791 - LTR67 LTR ERVL -14 543 475 * 228 67 0 0 chr17 70084115 70084145 -19420408 + (TCCCC)n Simple_repeat Simple_repeat 5 34 0 1501 164 0 15 chr17 70084145 70084413 -19420140 - AluJb SINE Alu -38 274 11 206 118 0 0 chr17 70084425 70084459 -19420094 + (T)n Simple_repeat Simple_repeat 1 34 0 1069 123 0 0 chr17 70084465 70084620 -19419933 + AluSg/x SINE Alu 137 291 -21 877 128 0 0 chr17 70084623 70084748 -19419805 - AluJb SINE Alu -187 125 1 331 254 91 27 chr17 70085595 70085705 -19418848 - L2 LINE L2 -16 3297 3181 5002 137 83 37 chr17 70085787 70086764 -19417789 + L1MC3 LINE L1 6756 7777 -8 29 0 0 0 chr17 70086847 70086876 -19417677 + AT_rich Low_complexity Low_complexity 1 29 0 495 189 0 0 chr17 70086876 70086966 -19417587 - AluJ/FRAM SINE Alu -3 309 220 383 156 0 11 chr17 70086975 70087065 -19417488 + (TTA)n Simple_repeat Simple_repeat 2 90 0 1965 102 7 21 chr17 70087067 70087375 -19417178 - AluSg SINE Alu 0 304 1 2202 94 0 0 chr17 70087383 70087671 -19416882 - AluSx SINE Alu -24 288 1 258 350 150 12 chr17 70088822 70089062 -19415491 - L2 LINE L2 -820 2494 2222 1484 181 43 12 chr17 70089096 70089422 -19415131 + MLT1A1 LTR MaLR 1 336 -29 2245 103 0 6 chr17 70089462 70089773 -19414780 - AluY SINE Alu -2 309 1 868 235 18 89 chr17 70089840 70090121 -19414432 - MIR SINE MIR 0 262 2 218 261 101 14 chr17 70090577 70090646 -19413907 - MIR SINE MIR 0 262 188 910 150 0 0 chr17 70090686 70090819 -19413734 - FLAM_C SINE Alu 0 133 1 1388 181 78 29 chr17 70091201 70091482 -19413071 + AluJo SINE Alu 1 295 -17 1741 148 46 40 chr17 70091874 70092178 -19412375 - AluJo SINE Alu -1 311 6 463 251 60 60 chr17 70092238 70092296 -19412257 + MIR SINE MIR 11 68 -194 2071 122 3 20 chr17 70092296 70092600 -19411953 - AluSg SINE Alu -11 299 1 463 251 60 60 chr17 70092600 70092708 -19411845 + MIR SINE MIR 67 177 -85 21 0 0 0 chr17 70092769 70092790 -19411763 + AT_rich Low_complexity Low_complexity 1 21 0 2240 99 14 0 chr17 70092840 70093133 -19411420 + AluSx SINE Alu 1 297 -15 382 305 51 8 chr17 70094122 70094240 -19410313 + L2 LINE L2 3150 3272 0 2985 89 32 36 chr17 70094818 70095225 -19409328 + MER1A DNA MER1_type 59 465 -2237 639 0 0 0 chr17 70095225 70095296 -19409257 + (CA)n Simple_repeat Simple_repeat 1 71 0 2985 89 32 36 chr17 70095296 70095359 -19409194 + MER1A DNA MER1_type 465 527 -2 1837 142 14 35 chr17 70096296 70096584 -19407969 - AluSx SINE Alu -30 282 1 648 282 92 122 chr17 70096678 70098207 -19406346 - L2 LINE L2 -1 3271 1786 7163 75 42 2 chr17 70098207 70100009 -19404544 - L1PA7 LINE L1 -6 6148 4303 648 282 92 122 chr17 70100009 70100073 -19404480 - L2 LINE L2 -1486 1786 1722 450 0 0 0 chr17 70100923 70100973 -19403580 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 1859 127 0 91 chr17 70100973 70101281 -19403272 - AluSx SINE Alu -32 280 1 348 180 0 90 chr17 70101300 70101331 -19403222 - L1MB7 LINE L1 -19 6165 6133 2384 68 7 0 chr17 70101331 70101624 -19402929 - AluSg SINE Alu -15 295 1 348 180 0 90 chr17 70101624 70101692 -19402861 - L1MB7 LINE L1 -51 6133 6075 195 42 0 0 chr17 70101883 70101907 -19402646 + (A)n Simple_repeat Simple_repeat 1 24 0 288 0 0 0 chr17 70103193 70103225 -19401328 + (TA)n Simple_repeat Simple_repeat 2 33 0 1804 156 21 0 chr17 70103227 70103380 -19401173 - AluJo SINE Alu -24 288 125 189 0 0 0 chr17 70103380 70103401 -19401152 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1804 156 21 0 chr17 70103401 70103529 -19401024 - AluJo SINE Alu -187 125 1 2318 97 0 0 chr17 70104008 70104306 -19400247 - AluSg SINE Alu -12 298 1 2359 83 3 0 chr17 70105369 70105670 -19398883 - AluSx SINE Alu -10 302 1 2063 119 10 0 chr17 70106030 70106323 -19398230 - AluY SINE Alu -15 296 1 2444 79 45 8 chr17 70106636 70106992 -19397561 - L1PB1 LINE L1 0 6151 5783 183 220 0 0 chr17 70107014 70107064 -19397489 + (TA)n Simple_repeat Simple_repeat 1 50 0 319 263 57 53 chr17 70107722 70107950 -19396603 - L1ME LINE L1 -382 5739 5511 489 287 115 30 chr17 70108497 70108560 -19395993 - L1ME LINE L1 -1368 4778 4722 1671 126 0 42 chr17 70108560 70108821 -19395732 - AluSx SINE Alu -24 288 39 489 287 115 30 chr17 70108821 70108905 -19395648 - L1ME LINE L1 -1424 4722 4647 2102 134 13 3 chr17 70108905 70109211 -19395342 + AluSx SINE Alu 1 309 -3 489 287 115 30 chr17 70109211 70109398 -19395155 - L1ME LINE L1 -1499 4647 4402 945 108 0 0 chr17 70109487 70109607 -19394946 + AluJo/FLAM SINE Alu 1 120 -192 2335 97 3 0 chr17 70109607 70109916 -19394637 - AluSp SINE Alu -3 310 1 24 32 0 0 chr17 70110033 70110064 -19394489 + AT_rich Low_complexity Low_complexity 1 31 0 1524 204 93 9 chr17 70110347 70110768 -19393785 - L1ME1 LINE L1 -131 6035 5580 1224 176 81 0 chr17 70110769 70110990 -19393563 + AluJb SINE Alu 54 292 -20 1513 229 69 27 chr17 70110997 70111686 -19392867 - L1ME1 LINE L1 -748 5398 4854 2019 110 38 0 chr17 70111686 70111977 -19392576 + AluSx SINE Alu 1 302 -10 1513 229 69 27 chr17 70111977 70112098 -19392455 - L1ME1 LINE L1 -1292 4854 4740 1673 157 32 11 chr17 70112543 70112824 -19391729 - AluJo SINE Alu -25 287 1 2261 113 7 0 chr17 70112861 70113171 -19391382 - AluSx SINE Alu 0 312 1 1939 100 63 0 chr17 70113263 70113533 -19391020 - AluSx SINE Alu -25 287 1 1920 122 54 0 chr17 70113635 70113914 -19390639 - AluSx SINE Alu -18 294 1 340 350 24 0 chr17 70113937 70114060 -19390493 + MIR SINE MIR 14 139 -123 808 175 0 0 chr17 70114133 70114259 -19390294 + FLAM_A SINE Alu 6 131 -11 25 31 0 0 chr17 70114421 70114453 -19390100 + AT_rich Low_complexity Low_complexity 1 32 0 1960 139 0 10 chr17 70114610 70114905 -19389648 - AluSx SINE Alu -20 292 1 35 0 0 0 chr17 70114907 70114942 -19389611 + AT_rich Low_complexity Low_complexity 1 35 0 1556 190 65 0 chr17 70115684 70115963 -19388590 - AluJo SINE Alu -3 309 13 1314 203 39 51 chr17 70116376 70116687 -19387866 - AluJo SINE Alu 0 312 6 2068 121 10 10 chr17 70116769 70117067 -19387486 - AluSx SINE Alu -14 298 1 229 250 16 47 chr17 70117288 70117352 -19387201 - L2 LINE L2 -4 3268 3207 229 271 161 0 chr17 70117539 70117657 -19386896 + Charlie2 DNA MER1_type 185 321 -2461 * 1112 163 47 133 chr17 70117655 70117784 -19386769 + Charlie2 DNA MER1_type 1857 1995 -867 2066 131 6 10 chr17 70117784 70118097 -19386456 + AluJb SINE Alu 1 312 0 1112 163 47 133 chr17 70118097 70118109 -19386444 + Charlie2 DNA MER1_type 1995 2006 -856 2212 112 3 0 chr17 70118109 70118395 -19386158 + AluSx SINE Alu 10 296 -16 1112 163 47 133 chr17 70118395 70118695 -19385858 + Charlie2 DNA MER1_type 2006 2261 -601 691 188 15 23 chr17 70118696 70118829 -19385724 + FLAM_A SINE Alu 2 133 0 776 241 6 11 chr17 70118883 70119057 -19385496 - FAM SINE Alu 0 175 3 385 193 7 74 chr17 70119085 70119220 -19385333 - L1MC5 LINE L1 -385 7576 7451 1393 99 19 47 chr17 70119438 70119651 -19384902 - AluSq SINE Alu -9 304 98 1333 115 11 0 chr17 70119654 70119836 -19384717 - AluSx SINE Alu -128 184 1 1794 170 0 41 chr17 70119844 70120162 -19384391 - AluJb SINE Alu -5 307 3 1280 152 121 0 chr17 70120187 70120411 -19384142 + AluJb SINE Alu 1 251 -61 1572 109 5 5 chr17 70120411 70120631 -19383922 + AluSg/x SINE Alu 72 291 -21 299 265 0 15 chr17 70120646 70120714 -19383839 + L2 LINE L2 3017 3083 -189 598 302 35 0 chr17 70120715 70120917 -19383636 - LTR33 LTR ERVL -8 513 305 473 243 69 42 chr17 70120927 70121071 -19383482 - LTR33 LTR ERVL -373 148 1 1827 173 7 0 chr17 70121144 70121439 -19383114 + AluJb SINE Alu 1 297 -15 1334 134 0 10 chr17 70121456 70121680 -19382873 + AluJb SINE Alu 87 308 0 184 182 114 0 chr17 70121764 70121808 -19382745 + L2 LINE L2 3265 3313 0 803 251 105 23 chr17 70122335 70122360 -19382193 - MLT1G LTR MaLR -14 528 506 1847 129 4 4 chr17 70122360 70122623 -19381930 + AluSx SINE Alu 1 263 -49 803 251 105 23 chr17 70122623 70123069 -19381484 - MLT1G LTR MaLR -36 506 1 2297 114 0 0 chr17 70123520 70123828 -19380725 - AluSc SINE Alu -1 308 1 448 369 141 0 chr17 70123894 70124135 -19380418 + L2 LINE L2 2702 2976 -338 259 98 0 0 chr17 70124302 70124353 -19380200 - L1MC3 LINE L1 0 7785 7735 759 113 57 25 chr17 70124405 70124564 -19379989 - L1MC3 LINE L1 -55 7730 7567 218 359 151 0 chr17 70124583 70124689 -19379864 + L2 LINE L2 3145 3266 -6 406 294 49 49 chr17 70124692 70124855 -19379698 - MIR3 SINE MIR -27 181 19 319 214 107 19 chr17 70124856 70124875 -19379678 + MER69 DNA AcHobo 18 34 -2492 2276 114 0 0 chr17 70124875 70125172 -19379381 - AluSx SINE Alu -15 297 1 319 214 107 19 chr17 70125172 70125255 -19379298 + MER69 DNA AcHobo 34 129 -2397 480 248 8 16 chr17 70125255 70125380 -19379173 - L1ME3A LINE L1 -12 6158 6035 2116 219 34 0 chr17 70125382 70125826 -19378727 + MER69 DNA AcHobo 106 564 -1962 414 260 14 20 chr17 70125818 70125964 -19378589 + MER69 DNA AcHobo 2000 2144 -382 * 1051 111 0 0 chr17 70125966 70126101 -19378452 + AluSq/x SINE Alu 1 135 -177 2341 107 7 10 chr17 70126101 70126410 -19378143 + AluSx SINE Alu 1 308 -4 1111 164 3 123 chr17 70126431 70126603 -19377950 + L1M4 LINE L1 4764 4882 -1264 1988 156 0 0 chr17 70126603 70126892 -19377661 + AluSx SINE Alu 1 289 -23 1111 164 3 123 chr17 70126892 70127036 -19377517 + L1M4 LINE L1 4882 5042 -1104 1257 150 6 0 chr17 70127041 70127221 -19377332 + AluSq SINE Alu 1 181 -132 2091 100 0 0 chr17 70127227 70127486 -19377067 - AluSq SINE Alu -54 259 1 821 125 16 0 chr17 70127519 70127647 -19376906 - AluSp/q SINE Alu 0 313 184 25 31 0 0 chr17 70127747 70127779 -19376774 + AT_rich Low_complexity Low_complexity 1 32 0 216 158 0 0 chr17 70127779 70127817 -19376736 + (CA)n Simple_repeat Simple_repeat 2 39 0 3503 94 2 12 chr17 70127817 70128372 -19376181 - L1P5 LINE L1 -369 5782 5232 1861 169 0 23 chr17 70128387 70128688 -19375865 - AluJb SINE Alu -18 294 1 2038 138 15 6 chr17 70129842 70130176 -19374377 - MER1B DNA MER1_type 0 337 1 1039 164 74 61 chr17 70130306 70130537 -19374016 + MIR SINE MIR 3 236 -26 344 225 104 59 chr17 70131664 70131846 -19372707 - HAL1 LINE L1 -20 2487 2292 2286 101 6 25 chr17 70131846 70132164 -19372389 - AluSx SINE Alu 0 312 1 344 225 104 59 chr17 70132164 70132203 -19372350 - HAL1 LINE L1 -215 2292 2256 28 29 0 0 chr17 70132209 70132244 -19372309 + AT_rich Low_complexity Low_complexity 1 35 0 1658 171 14 31 chr17 70132244 70132531 -19372022 - AluJo SINE Alu -30 282 1 1330 256 71 63 chr17 70132564 70133267 -19371286 - HAL1 LINE L1 -275 2232 1524 416 158 0 105 chr17 70133277 70133391 -19371162 - MER33 DNA MER1_type -5 319 218 230 195 24 0 chr17 70133386 70133427 -19371126 + Alu SINE Alu 132 173 -129 * 374 186 54 163 chr17 70133461 70133725 -19370828 - MER33 DNA MER1_type -249 75 1 464 166 122 50 chr17 70133775 70133914 -19370639 - L1M4 LINE L1 -654 5520 5372 2367 82 0 10 chr17 70134646 70134950 -19369603 - AluSp SINE Alu -12 301 1 464 237 36 43 chr17 70135098 70135237 -19369316 - MLT1K LTR MaLR -4 584 447 23 68 0 0 chr17 70135884 70135928 -19368625 + AT_rich Low_complexity Low_complexity 1 44 0 187 250 10 10 chr17 70136250 70136346 -19368207 + (TA)n Simple_repeat Simple_repeat 2 97 0 186 313 125 39 chr17 70137743 70137871 -19366682 - L2 LINE L2 -8 3264 3126 254 282 171 8 chr17 70137937 70138054 -19366499 - MIR SINE MIR -79 183 48 453 238 177 18 chr17 70138132 70138296 -19366257 - MIR SINE MIR 0 262 73 22 56 0 0 chr17 70138730 70138766 -19365787 + AT_rich Low_complexity Low_complexity 1 36 0 2338 94 3 3 chr17 70139212 70139521 -19365032 + AluSq SINE Alu 1 309 -4 2789 119 121 19 chr17 70139714 70140192 -19364361 - MER1A DNA MER1_type 0 527 1 2244 111 0 16 chr17 70140732 70141047 -19363506 + AluSg SINE Alu 1 310 0 22 0 0 0 chr17 70141233 70141255 -19363298 + AT_rich Low_complexity Low_complexity 1 22 0 282 142 0 50 chr17 70141377 70141438 -19363115 + AluJb SINE Alu 163 215 -87 305 341 6 59 chr17 70142152 70142322 -19362231 - MIR3 SINE MIR -6 202 42 1930 89 10 52 chr17 70142450 70142771 -19361782 - AluSc SINE Alu 0 309 1 2564 48 0 10 chr17 70142879 70143188 -19361365 - AluY SINE Alu -5 306 1 286 273 71 20 chr17 70143955 70144054 -19360499 - MIR SINE MIR 0 262 159 238 328 0 0 chr17 70144068 70144129 -19360424 + MIR SINE MIR 32 92 -170 2176 94 50 0 chr17 70144237 70144534 -19360019 - AluSx SINE Alu 0 312 1 302 332 79 0 chr17 70144737 70144939 -19359614 - L1M4 LINE L1 -1155 4991 4774 849 144 0 0 chr17 70144941 70145059 -19359494 - FLAM_C SINE Alu -21 122 5 228 323 0 0 chr17 70145541 70145606 -19358947 + LTR16A1 LTR ERVL 376 440 -17 1060 145 0 100 chr17 70146236 70146340 -19358213 - L1MB3 LINE L1 -1 6182 6116 2277 110 0 0 chr17 70146340 70146641 -19357912 + AluSx SINE Alu 2 302 -10 1060 145 0 100 chr17 70146641 70146785 -19357768 - L1MB3 LINE L1 -67 6116 5959 2240 99 0 3 chr17 70147034 70147328 -19357225 + AluSx SINE Alu 1 293 -19 256 252 67 10 chr17 70147374 70147541 -19357012 + MLT1D LTR MaLR 262 505 0 2352 97 3 3 chr17 70147664 70147972 -19356581 - AluSp SINE Alu -5 308 1 1762 141 14 25 chr17 70149794 70150071 -19354482 + AluJo SINE Alu 19 292 -20 2345 94 0 0 chr17 70150513 70150810 -19353743 + AluSg SINE Alu 1 297 -13 202 254 186 25 chr17 70151441 70151559 -19352994 - L2 LINE L2 -1334 1980 1844 1217 129 6 0 chr17 70151584 70151755 -19352798 + AluJo SINE Alu 7 178 -134 359 251 188 14 chr17 70151911 70152118 -19352435 + L1MEc LINE L1 1694 1936 -4460 3793 183 29 4 chr17 70152126 70152808 -19351745 - MER50 LTR ERV1 -35 699 1 1466 137 13 9 chr17 70152810 70153036 -19351517 - MER50-int LTR ERV1 -10 7195 6969 2311 80 0 3 chr17 70154714 70155034 -19349519 - AluY SINE Alu 0 319 1 369 0 0 0 chr17 70155256 70155297 -19349256 + (TG)n Simple_repeat Simple_repeat 2 42 0 861 191 21 63 chr17 70157510 70157699 -19346854 + AluJb SINE Alu 113 293 -19 2049 121 3 10 chr17 70157898 70158187 -19346366 - AluSx SINE Alu -25 287 1 29 28 0 0 chr17 70158950 70158986 -19345567 + AT_rich Low_complexity Low_complexity 1 36 0 267 192 51 39 chr17 70159407 70159485 -19345068 + MER5A DNA MER1_type 86 164 -25 190 276 115 46 chr17 70159420 70159507 -19345046 - MER5A DNA MER1_type -90 99 7 * 1729 216 28 20 chr17 70160122 70160516 -19344037 + MLT2C1 LTR ERVL 1 397 0 586 128 12 0 chr17 70160859 70160945 -19343608 + LTR12 LTR ERV1 628 714 0 819 168 20 0 chr17 70160945 70161094 -19343459 - L1P LINE L1 -1207 4939 4788 5676 117 30 2 chr17 70161102 70161991 -19342562 + L1PA12 LINE L1 5254 6167 -1 21 36 0 0 chr17 70162046 70162074 -19342479 + AT_rich Low_complexity Low_complexity 1 28 0 413 239 34 17 chr17 70162193 70162310 -19342243 + MIR SINE MIR 144 262 0 259 274 123 68 chr17 70162299 70162445 -19342108 - MIR SINE MIR -101 161 8 * 2063 97 0 0 chr17 70163010 70163279 -19341274 + AluSc SINE Alu 1 269 -40 215 310 221 18 chr17 70164285 70164398 -19340155 - MER5B DNA MER1_type 0 178 43 899 259 80 20 chr17 70165667 70166277 -19338276 + L1MEc LINE L1 2114 2732 -3483 772 119 0 0 chr17 70167057 70167175 -19337378 + L1PA15 LINE L1 6041 6158 -7 1444 238 138 58 chr17 70167462 70168012 -19336541 + MLT1E1 LTR MaLR 60 653 -1 1956 161 27 21 chr17 70168095 70168468 -19336085 + THE1C LTR MaLR 1 375 0 1121 328 58 19 chr17 70168863 70169598 -19334955 - L1MEc LINE L1 -5483 913 150 241 315 28 42 chr17 70169715 70169858 -19334695 - HAL1b LINE L1 -963 385 245 378 230 44 0 chr17 70172143 70172256 -19332297 - L1 LINE L1 -841 5305 5188 2856 188 107 4 chr17 70172268 70172953 -19331600 - L1 LINE L1 -1079 5067 4313 203 0 0 36 chr17 70173242 70173270 -19331283 + (TTAAA)n Simple_repeat Simple_repeat 3 29 0 1052 188 9 45 chr17 70173536 70173760 -19330793 - MER50-int LTR ERV1 -6989 216 1 3911 169 23 11 chr17 70173879 70174587 -19329966 - MER50 LTR ERV1 -12 722 7 340 290 92 62 chr17 70174642 70175046 -19329507 + L1MEc LINE L1 1968 2383 -4013 2835 78 8 0 chr17 70175395 70175777 -19328776 + L1PA7 LINE L1 5763 6147 -7 222 379 53 0 chr17 70176007 70176102 -19328451 + MER5B DNA MER1_type 78 177 -1 4328 104 13 1 chr17 70177008 70177907 -19326646 - L1PA8A LINE L1 -506 5625 4715 1093 117 0 0 chr17 70177905 70178076 -19326477 - L1PA8A LINE L1 -1672 4474 4304 * 1838 120 0 0 chr17 70178077 70178368 -19326185 - L1PA8A LINE L1 -2186 3960 3670 4281 175 11 7 chr17 70178374 70179290 -19325263 - L1 LINE L1 -1088 5058 4139 1759 126 0 43 chr17 70179769 70180047 -19324506 + AluSg SINE Alu 35 300 -10 2251 83 6 52 chr17 70180413 70180738 -19323815 + AluSg SINE Alu 1 310 0 35 0 0 0 chr17 70181466 70181501 -19323052 + AT_rich Low_complexity Low_complexity 1 35 0 6113 168 6 21 chr17 70181758 70182883 -19321670 - L1P LINE L1 -1955 4191 3087 2107 139 3 3 chr17 70182883 70183192 -19321361 - AluSq SINE Alu -2 311 3 6113 168 6 21 chr17 70183192 70183319 -19321234 - L1P LINE L1 -3059 3087 2959 1876 114 11 0 chr17 70183321 70183602 -19320951 + MLT2A2 LTR ERVL 2 285 -168 26 0 0 0 chr17 70183811 70183837 -19320716 + AT_rich Low_complexity Low_complexity 1 26 0 303 213 0 0 chr17 70183954 70184029 -19320524 + (CA)n Simple_repeat Simple_repeat 2 76 0 3128 141 6 4 chr17 70184992 70185488 -19319065 + LOR1a LTR ERV1 1 497 0 1348 108 5 5 chr17 70186549 70186753 -19317800 + L1PB2 LINE L1 5946 6149 -2 184 349 0 81 chr17 70186873 70186959 -19317594 - L3b LINE CR1 -18 1565 1487 258 32 0 0 chr17 70187188 70187219 -19317334 + (TG)n Simple_repeat Simple_repeat 2 32 0 202 418 11 0 chr17 70187632 70187723 -19316830 + MIR3 SINE MIR 82 173 -35 2677 185 132 43 chr17 70187761 70188822 -19315731 - L1MB2 LINE L1 -7 7583 6435 699 171 0 0 chr17 70189990 70190119 -19314434 + (TG)n Simple_repeat Simple_repeat 2 130 0 325 209 143 0 chr17 70191469 70191560 -19312993 + MER5A DNA MER1_type 10 113 -76 6902 210 143 14 chr17 70191678 70193507 -19311046 - L1MB2 LINE L1 -5488 2077 14 693 174 30 0 chr17 70193546 70193678 -19310875 + MSTB1 LTR MaLR 1 136 -296 2219 90 0 52 chr17 70193792 70194102 -19310451 - AluSq SINE Alu -14 299 6 600 77 0 0 chr17 70194164 70194242 -19310311 + Alu SINE Alu 1 78 -231 205 125 150 0 chr17 70194867 70194907 -19309646 + L2 LINE L2 3262 3307 -6 274 143 0 0 chr17 70194907 70194956 -19309597 + Alu SINE Alu 1 49 -250 * 359 140 0 0 chr17 70194955 70195012 -19309541 + AluS SINE Alu 21 77 -226 1106 199 52 16 chr17 70195112 70195363 -19309190 - LTR28 LTR ERV1 -402 618 359 365 208 107 134 chr17 70195350 70195566 -19308987 - LTR1 LTR ERV1 -557 228 109 * 348 264 236 0 chr17 70195542 70195686 -19308867 - LTR28 LTR ERV1 -842 178 1 * 734 293 33 6 chr17 70195729 70195910 -19308643 + MER5A DNA MER1_type 1 186 -3 1839 223 6 0 chr17 70196714 70197073 -19307480 - MLT1A1 LTR MaLR -4 361 1 187 231 39 39 chr17 70197521 70197573 -19306980 + L3 LINE CR1 1520 1571 -6 190 339 124 8 chr17 70198991 70199112 -19305441 + MIR3 SINE MIR 74 208 0 531 110 12 0 chr17 70199292 70199374 -19305179 - THE1C LTR MaLR 0 375 293 963 174 37 0 chr17 70199487 70199648 -19304905 + FRAM SINE Alu 1 164 -12 2025 151 0 16 chr17 70199661 70199978 -19304575 + AluSx SINE Alu 1 312 0 2044 96 86 0 chr17 70200685 70200965 -19303588 + AluSq SINE Alu 1 304 -9 1953 140 20 10 chr17 70201265 70201557 -19302996 + AluJb SINE Alu 1 295 -17 395 254 42 7 chr17 70201718 70201860 -19302693 + L1M4 LINE L1 199 345 -5979 233 125 0 54 chr17 70201879 70201935 -19302618 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 36 40 0 0 chr17 70201942 70201992 -19302561 + AT_rich Low_complexity Low_complexity 1 50 0 585 230 109 104 chr17 70202003 70202447 -19302106 + L1M4 LINE L1 578 1019 -5393 186 43 0 0 chr17 70202447 70202470 -19302083 + (GA)n Simple_repeat Simple_repeat 2 24 0 585 230 109 104 chr17 70202470 70202981 -19301572 + L1M4 LINE L1 1019 1561 -4851 3770 256 63 34 chr17 70203000 70203207 -19301346 + L1M4 LINE L1 1729 1929 -4497 1921 60 48 8 chr17 70203207 70203455 -19301098 - AluY SINE Alu -16 295 38 3770 256 63 34 chr17 70203455 70205621 -19298932 + L1M4 LINE L1 1929 4234 -2192 2012 139 0 0 chr17 70205738 70206025 -19298528 - AluSx SINE Alu -25 287 1 1859 176 0 0 chr17 70206194 70206484 -19298069 - AluJb SINE Alu -22 290 1 2167 125 3 0 chr17 70206955 70207258 -19297295 + AluSx SINE Alu 1 304 -8 2121 92 23 0 chr17 70208267 70208570 -19295983 - L1PA13 LINE L1 -1 6162 5853 328 126 22 26 chr17 70208606 70208692 -19295861 + Alu SINE Alu 1 50 -249 406 293 33 72 chr17 70209443 70209624 -19294929 + MER5B DNA MER1_type 3 176 -2 23 33 0 0 chr17 70212138 70212168 -19292385 + AT_rich Low_complexity Low_complexity 1 30 0 2386 72 3 19 chr17 70213951 70214258 -19290295 + AluSx SINE Alu 1 302 -10 2272 109 0 7 chr17 70215979 70216281 -19288272 + AluSg SINE Alu 1 300 -10 1635 164 10 31 chr17 70216284 70216577 -19287976 + AluJb SINE Alu 1 287 -25 270 0 0 0 chr17 70216735 70216765 -19287788 + (TA)n Simple_repeat Simple_repeat 1 30 0 344 224 0 0 chr17 70216938 70217005 -19287548 - L2 LINE L2 -6 3266 3200 787 160 21 14 chr17 70217192 70217336 -19287217 - FAM SINE Alu -35 150 6 1512 113 5 9 chr17 70217407 70217619 -19286934 - AluSg/x SINE Alu -20 290 80 23 54 0 0 chr17 70218032 70218069 -19286484 + AT_rich Low_complexity Low_complexity 1 37 0 181 270 201 29 chr17 70218672 70218876 -19285677 + L2 LINE L2 299 537 -2777 198 0 0 0 chr17 70218921 70218943 -19285610 + (TCTA)n Simple_repeat Simple_repeat 2 23 0 1718 109 80 86 chr17 70218971 70219273 -19285280 - AluSq SINE Alu -13 300 1 815 189 27 7 chr17 70220185 70220333 -19284220 - Tigger3(Golem) DNA MER2_type -2 3027 2877 2587 158 128 35 chr17 70221014 70221069 -19283484 - L1MB7 LINE L1 0 6184 6136 1654 178 51 0 chr17 70221069 70221344 -19283209 - AluJb SINE Alu -23 289 1 2587 158 128 35 chr17 70221344 70221922 -19282631 - L1MB7 LINE L1 -48 6136 5492 270 180 16 0 chr17 70221924 70221985 -19282568 - L1MB7 LINE L1 -736 5442 5381 343 335 110 12 chr17 70223701 70223874 -19280679 + MIR SINE MIR 25 214 -48 1503 156 53 46 chr17 70223905 70224188 -19280365 - AluJb SINE Alu -17 295 11 247 241 79 101 chr17 70225889 70226117 -19278436 - L1ME4a LINE L1 -90 6031 5809 556 135 0 0 chr17 70226652 70226726 -19277827 + tRNA-Thr-ACT tRNA tRNA 2 75 -2 1902 124 4 0 chr17 70226759 70227025 -19277528 + AluSp SINE Alu 43 309 -4 1876 120 19 0 chr17 70227125 70227392 -19277161 - AluSx SINE Alu -11 301 30 21 0 0 0 chr17 70229043 70229064 -19275489 + AT_rich Low_complexity Low_complexity 1 21 0 406 254 220 10 chr17 70229364 70229614 -19274939 + L1MC4a LINE L1 5483 5785 -336 259 295 54 0 chr17 70229860 70229972 -19274581 + L1MC4a LINE L1 5803 5920 -1888 1837 170 3 0 chr17 70230637 70230926 -19273627 - AluJb SINE Alu -21 291 2 259 194 217 54 chr17 70231984 70232113 -19272440 + HAL1b LINE L1 433 582 -766 354 211 48 102 chr17 70232167 70232267 -19272286 + HAL1b LINE L1 870 959 -389 1835 114 75 14 chr17 70232267 70232547 -19272006 - AluSx SINE Alu -15 297 1 354 211 48 102 chr17 70232547 70232612 -19271941 + HAL1b LINE L1 959 1026 -322 294 115 39 0 chr17 70232619 70232671 -19271882 - Alu SINE Alu -2 300 247 25 51 0 0 chr17 70232808 70232847 -19271706 + AT_rich Low_complexity Low_complexity 1 39 0 309 243 81 47 chr17 70232855 70233003 -19271550 - L1ME3A LINE L1 -61 6109 5957 1633 170 73 0 chr17 70233175 70233463 -19271090 - AluJo SINE Alu -3 309 1 633 110 0 0 chr17 70233509 70233591 -19270962 - Alu SINE Alu -11 301 220 301 239 0 22 chr17 70233598 70233690 -19270863 + L1ME4a LINE L1 5982 6071 -50 656 276 143 0 chr17 70233712 70233922 -19270631 + MIR SINE MIR 23 262 0 200 163 0 47 chr17 70234449 70234492 -19270061 + (CATA)n Simple_repeat Simple_repeat 3 43 0 971 91 0 70 chr17 70234592 70234735 -19269818 - FLAM_C SINE Alu 0 133 1 2265 92 14 0 chr17 70234944 70235238 -19269315 + AluSg SINE Alu 1 298 -12 1724 150 98 0 chr17 70236194 70236468 -19268085 + AluSx SINE Alu 1 301 -11 2245 105 3 3 chr17 70237946 70238242 -19266311 + AluSq SINE Alu 1 296 -17 231 270 153 54 chr17 70238345 70238750 -19265803 + L1ME4a LINE L1 5388 5752 -369 2017 133 0 7 chr17 70238750 70239044 -19265509 + AluSx SINE Alu 1 292 -20 231 270 153 54 chr17 70239044 70239093 -19265460 + L1ME4a LINE L1 5752 5795 -326 1477 158 73 37 chr17 70239093 70239365 -19265188 + AluJo SINE Alu 1 282 -30 231 270 153 54 chr17 70239365 70239576 -19264977 + L1ME4a LINE L1 5795 6121 0 2422 103 0 0 chr17 70239580 70239892 -19264661 + AluSx SINE Alu 1 312 0 355 277 245 0 chr17 70240850 70241034 -19263519 - MIR SINE MIR -6 256 28 180 271 0 68 chr17 70243411 70243470 -19261083 + L2 LINE L2 3209 3263 -9 567 246 33 83 chr17 70244716 70244956 -19259597 - L1MC4a LINE L1 -1873 5935 5708 8709 72 3 12 chr17 70244996 70246075 -19258478 + MER11C LTR ERVK 1 1069 -2 1682 170 17 7 chr17 70246076 70246376 -19258177 + AluJb SINE Alu 1 303 -9 201 94 0 0 chr17 70247006 70247038 -19257515 + (TA)n Simple_repeat Simple_repeat 2 33 0 1960 147 0 26 chr17 70247225 70247532 -19257021 - AluSx SINE Alu -13 299 1 556 155 58 29 chr17 70247596 70247699 -19256854 + FLAM_C SINE Alu 2 107 -36 227 234 21 11 chr17 70247984 70248078 -19256475 + (TATAA)n Simple_repeat Simple_repeat 4 98 0 310 215 15 0 chr17 70259637 70259702 -19244851 - MER5A DNA MER1_type -123 66 1 2405 225 119 61 chr17 70261167 70261286 -19243267 + L1MC4 LINE L1 6331 6442 -1396 2436 75 0 0 chr17 70261286 70261581 -19242972 + AluSq SINE Alu 1 295 -18 2405 225 119 61 chr17 70261581 70261724 -19242829 + L1MC4 LINE L1 6442 6575 -1263 1910 136 11 0 chr17 70261724 70261997 -19242556 - AluJb SINE Alu -36 276 1 2405 225 119 61 chr17 70261997 70262101 -19242452 + L1MC4 LINE L1 6575 6672 -1166 2534 50 0 16 chr17 70262101 70262404 -19242149 - AluY SINE Alu -13 298 1 2405 225 119 61 chr17 70262404 70263277 -19241276 + L1MC4 LINE L1 6672 7666 -172 1331 248 19 8 chr17 70263417 70263796 -19240757 - L1 LINE L1 -1724 4422 4040 521 189 0 0 chr17 70263791 70263886 -19240667 + L1 LINE L1 3940 4034 -2112 * 2394 60 0 7 chr17 70264259 70264557 -19239996 + AluY SINE Alu 1 296 -15 1646 190 10 7 chr17 70264609 70264909 -19239644 - AluJb SINE Alu -11 301 1 233 106 0 21 chr17 70266070 70266117 -19238436 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 430 194 0 0 chr17 70266527 70266599 -19237954 - AluJ/FRAM SINE Alu -22 290 219 847 165 0 0 chr17 70266599 70266732 -19237821 - AluJo/FLAM SINE Alu -179 133 1 831 179 21 0 chr17 70266767 70266912 -19237641 + FAM SINE Alu 21 168 -17 2006 202 138 45 chr17 70267302 70267822 -19236731 - L1MC4 LINE L1 -146 7896 7299 2356 100 0 0 chr17 70267822 70268121 -19236432 + AluSc SINE Alu 1 299 -10 2006 202 138 45 chr17 70268121 70268269 -19236284 - L1MC4 LINE L1 -743 7299 7166 1573 229 17 3 chr17 70268269 70268566 -19235987 - AluJo SINE Alu -11 301 1 380 211 11 0 chr17 70268569 70268659 -19235894 - L1MC4 LINE L1 -791 7251 7161 729 193 193 16 chr17 70268759 70269002 -19235551 - L1MC4 LINE L1 -888 7154 6869 488 171 0 0 chr17 70269002 70269090 -19235463 + AluJ/FRAM SINE Alu 223 310 -2 1341 113 118 0 chr17 70269141 70269336 -19235217 - AluSg/x SINE Alu -10 302 85 712 197 0 8 chr17 70269551 70269683 -19234870 - FLAM_C SINE Alu 0 133 3 950 117 0 41 chr17 70269879 70270024 -19234529 - FLAM_C SINE Alu -4 139 1 869 140 0 22 chr17 70270250 70270386 -19234167 - FLAM_C SINE Alu 0 133 1 2173 138 0 0 chr17 70270463 70270775 -19233778 - AluSx SINE Alu 0 312 1 2102 111 0 24 chr17 70271447 70271745 -19232808 + AluSx SINE Alu 5 295 -17 278 308 17 51 chr17 70271782 70271899 -19232654 + MER5B DNA MER1_type 25 137 -41 318 278 56 0 chr17 70271925 70272015 -19232538 + L2 LINE L2 3158 3252 -20 953 95 0 29 chr17 70272060 70272197 -19232356 + AluSg/x SINE Alu 169 301 -9 255 325 129 41 chr17 70272857 70273152 -19231401 - L2 LINE L2 -1635 1679 1359 907 250 260 19 chr17 70273407 70274082 -19230471 + L2 LINE L2 2466 3313 0 1599 154 34 20 chr17 70274092 70274385 -19230168 + AluJb SINE Alu 1 297 -15 26 50 0 0 chr17 70274394 70274434 -19230119 + AT_rich Low_complexity Low_complexity 1 40 0 1935 143 13 13 chr17 70274574 70274875 -19229678 - AluJb SINE Alu -11 301 1 2143 140 0 6 chr17 70276444 70276758 -19227795 - AluSx SINE Alu 0 312 1 2167 109 6 16 chr17 70276979 70277292 -19227261 + AluSg SINE Alu 1 310 0 310 254 56 59 chr17 70277925 70278165 -19226388 + MLT1H LTR MaLR 1 289 -260 307 191 24 47 chr17 70278407 70278519 -19226034 + MLT1H1 LTR MaLR 422 551 -1 597 282 90 8 chr17 70280163 70280397 -19224156 + MIR SINE MIR 10 262 0 301 207 69 43 chr17 70280677 70280793 -19223760 - L1ME4a LINE L1 -217 5904 5786 456 254 137 58 chr17 70280888 70281093 -19223460 - MIR SINE MIR -40 222 2 374 250 72 26 chr17 70281105 70281257 -19223296 - L1ME4a LINE L1 -349 5772 5614 24 0 0 0 chr17 70281560 70281584 -19222969 + AT_rich Low_complexity Low_complexity 1 24 0 1943 139 17 0 chr17 70281872 70282166 -19222387 + AluJb SINE Alu 1 299 -13 2198 113 3 0 chr17 70283068 70283369 -19221184 + AluSc SINE Alu 1 302 -7 1709 155 12 59 chr17 70283378 70283507 -19221046 + AluJo SINE Alu 1 134 -178 2262 94 0 20 chr17 70283507 70283805 -19220748 - AluSc SINE Alu -17 292 1 1709 155 12 59 chr17 70283805 70283997 -19220556 + AluJo SINE Alu 134 307 -5 2032 146 0 16 chr17 70284432 70284747 -19219806 + AluJb SINE Alu 1 310 -2 1909 144 11 21 chr17 70285468 70285753 -19218800 + AluJo SINE Alu 1 282 -30 2387 73 21 0 chr17 70285766 70286055 -19218498 + AluSc SINE Alu 1 295 -14 1518 154 0 0 chr17 70286066 70286286 -19218267 + AluSg/x SINE Alu 86 305 -5 2239 84 0 7 chr17 70286484 70286792 -19217761 - AluSx SINE Alu 0 306 1 408 181 75 0 chr17 70287202 70287296 -19217257 + MER20 DNA MER1_type 41 141 -78 265 234 234 32 chr17 70287469 70287627 -19216926 + L2 LINE L2 1963 2152 -1162 34 0 0 0 chr17 70288177 70288211 -19216342 + AT_rich Low_complexity Low_complexity 1 34 0 784 297 47 4 chr17 70288511 70288747 -19215806 + L2 LINE L2 2414 2659 -655 2363 93 0 3 chr17 70288899 70289200 -19215353 + AluSx SINE Alu 1 300 -12 303 247 140 65 chr17 70289405 70289477 -19215076 - L2 LINE L2 -15 3298 3233 2197 93 7 3 chr17 70289477 70289768 -19214785 - AluSg SINE Alu -18 292 1 303 247 140 65 chr17 70289768 70289881 -19214672 - L2 LINE L2 -80 3233 3099 442 306 103 34 chr17 70290724 70291169 -19213384 - MLT1L LTR MaLR -18 597 122 669 243 0 0 chr17 70291542 70291678 -19212875 - AluJo SINE Alu -176 136 1 22 35 0 0 chr17 70291836 70291865 -19212688 + AT_rich Low_complexity Low_complexity 1 29 0 820 157 0 0 chr17 70291865 70291986 -19212567 - FLAM_C SINE Alu -12 121 1 964 73 8 0 chr17 70292290 70292414 -19212139 - AluSp SINE Alu -188 125 1 831 209 63 52 chr17 70293309 70293518 -19211035 + L1ME LINE L1 4946 5162 -984 686 177 16 16 chr17 70293518 70293642 -19210911 - FLAM_A SINE Alu -9 124 1 831 209 63 52 chr17 70293642 70293781 -19210772 + L1ME LINE L1 5162 5298 -848 1729 172 123 45 chr17 70293835 70294159 -19210394 + L1ME1 LINE L1 5622 5919 -415 1910 185 27 46 chr17 70294159 70294635 -19209918 + MLT1C LTR MaLR 1 467 0 1729 172 123 45 chr17 70294635 70294826 -19209727 + L1ME1 LINE L1 5919 6333 -1 343 297 249 0 chr17 70295361 70295546 -19209007 + MIR SINE MIR 31 261 -1 22 0 0 0 chr17 70296124 70296146 -19208407 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr17 70296245 70296269 -19208284 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2454 75 7 0 chr17 70296298 70296606 -19207947 - AluSg SINE Alu 0 310 1 1819 133 61 0 chr17 70296615 70296894 -19207659 - AluSx SINE Alu -16 296 1 1076 133 109 19 chr17 70297308 70297422 -19207131 + MER30 DNA MER1_type 1 103 -127 2159 105 0 29 chr17 70297422 70297590 -19206963 - AluSx SINE Alu -15 297 140 2313 90 0 7 chr17 70297590 70297890 -19206663 - AluSc SINE Alu -11 298 1 2159 105 0 29 chr17 70297890 70298027 -19206526 - AluSx SINE Alu -172 140 1 1076 133 109 19 chr17 70298027 70298123 -19206430 + MER30 DNA MER1_type 103 230 0 2265 103 0 0 chr17 70298456 70298746 -19205807 + AluSx SINE Alu 1 290 -22 2155 106 0 10 chr17 70298757 70299050 -19205503 + AluSq SINE Alu 6 295 -18 895 280 20 6 chr17 70299242 70299592 -19204961 + L1ME LINE L1 5307 5661 -509 464 256 143 18 chr17 70300331 70300499 -19204054 + MIR SINE MIR 1 189 -73 1684 168 13 13 chr17 70300514 70300817 -19203736 - AluJb SINE Alu -9 303 1 1751 142 3 56 chr17 70301092 70301395 -19203158 - AluJo SINE Alu -16 296 10 814 108 146 0 chr17 70302433 70302563 -19201990 - AluSg/x SINE Alu -4 305 157 4364 34 13 11 chr17 70302596 70303158 -19201395 + L1PA5 LINE L1 5618 6154 0 1494 184 19 15 chr17 70303173 70303444 -19201109 - AluJb SINE Alu -30 282 11 2404 70 3 7 chr17 70303501 70303803 -19200750 - AluSc SINE Alu -8 301 1 624 248 86 50 chr17 70305227 70305449 -19199104 - MIR SINE MIR -26 236 7 517 313 85 19 chr17 70306840 70307099 -19197454 + L2 LINE L2 2804 3079 -234 2149 105 0 51 chr17 70307222 70307536 -19197017 + AluSx SINE Alu 1 298 -14 1956 86 0 0 chr17 70308142 70308419 -19196134 - AluSx SINE Alu 0 316 40 1755 169 12 35 chr17 70308828 70309311 -19195242 + AluJo SINE Alu 1 476 0 2365 125 11 16 chr17 70309921 70310298 -19194255 + THE1C LTR MaLR 1 375 0 1161 102 0 36 chr17 70311133 70311300 -19193253 - AluSg/x SINE Alu -18 292 132 1950 111 64 4 chr17 70311300 70311580 -19192973 - AluSx SINE Alu -15 297 1 21 71 0 0 chr17 70515626 70515668 -18988885 + GC_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr17 70515755 70515793 -18988760 + GC_rich Low_complexity Low_complexity 1 38 0 187 197 0 40 chr17 70515895 70515971 -18988582 + G-rich Low_complexity Low_complexity 4 76 0 48 43 0 0 chr17 70516408 70516477 -18988076 + GC_rich Low_complexity Low_complexity 1 69 0 21 36 0 0 chr17 70516608 70516636 -18987917 + GC_rich Low_complexity Low_complexity 1 28 0 364 170 7 68 chr17 70516777 70516924 -18987629 + (CCCCG)n Simple_repeat Simple_repeat 2 139 0 24 32 0 0 chr17 70517000 70517031 -18987522 + GC_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr17 70517176 70517206 -18987347 + GC_rich Low_complexity Low_complexity 1 30 0 251 27 0 27 chr17 70517218 70517255 -18987298 + (CCCCG)n Simple_repeat Simple_repeat 4 39 0 2110 94 7 26 chr17 70518200 70518508 -18986045 + AluSx SINE Alu 1 302 -10 1862 113 88 0 chr17 70518723 70519007 -18985546 + AluSx SINE Alu 1 309 -3 450 0 0 0 chr17 70519623 70519673 -18984880 + (CA)n Simple_repeat Simple_repeat 1 50 0 2239 92 7 3 chr17 70519986 70520292 -18984261 + AluSp SINE Alu 1 307 -6 253 314 129 8 chr17 70521047 70521171 -18983382 + MIR SINE MIR 97 235 -27 256 231 64 127 chr17 70521397 70521453 -18983100 - MIR3 SINE MIR -32 176 118 2127 102 0 0 chr17 70521453 70521763 -18982790 + AluSq SINE Alu 1 310 0 256 231 64 127 chr17 70521763 70521877 -18982676 - MIR3 SINE MIR -90 118 15 2148 114 3 0 chr17 70522295 70522594 -18981959 + AluSx SINE Alu 1 300 -12 24 0 0 0 chr17 70522887 70522911 -18981642 + AT_rich Low_complexity Low_complexity 1 24 0 1870 126 3 35 chr17 70522926 70523236 -18981317 - AluSg SINE Alu -10 300 1 2085 88 14 14 chr17 70523516 70523813 -18980740 + AluSg SINE Alu 3 299 -11 2100 124 0 9 chr17 70524185 70524500 -18980053 - AluSq SINE Alu -1 312 1 238 260 0 0 chr17 70524708 70524758 -18979795 + L2 LINE L2 3137 3186 -86 480 267 31 30 chr17 70524933 70525129 -18979424 + MLT1E LTR MaLR 1 189 -353 424 300 27 13 chr17 70525176 70525326 -18979227 + MLT1E LTR MaLR 361 512 -81 1942 146 3 3 chr17 70525455 70525764 -18978789 - AluSx SINE Alu -3 309 1 1913 127 0 7 chr17 70525848 70526152 -18978401 + AluSq SINE Alu 1 302 0 2273 66 3 7 chr17 70526805 70527108 -18977445 + AluY SINE Alu 1 302 -9 1813 127 0 80 chr17 70527276 70527426 -18977127 + AluJb SINE Alu 1 111 -201 1306 66 12 0 chr17 70527426 70527592 -18976961 + L1PA10 LINE L1 5998 6165 -3 1813 127 0 80 chr17 70527592 70527780 -18976773 + AluJb SINE Alu 111 312 0 309 275 12 0 chr17 70529182 70529262 -18975291 + MIR SINE MIR 111 191 -71 1931 120 47 3 chr17 70529273 70529572 -18974981 + AluSx SINE Alu 1 312 0 2277 106 0 0 chr17 70530172 70530474 -18974079 - AluSq SINE Alu -11 302 1 2129 76 7 7 chr17 70530673 70530963 -18973590 - AluY SINE Alu 0 311 22 2312 84 7 3 chr17 70531087 70531397 -18973156 + AluY SINE Alu 1 311 0 374 311 20 46 chr17 70531438 70531589 -18972964 + MIR SINE MIR 26 172 -90 2322 81 3 0 chr17 70531628 70531925 -18972628 - AluSp SINE Alu -15 298 1 2206 109 3 0 chr17 70531996 70532299 -18972254 + AluSq SINE Alu 1 304 -9 185 289 9 61 chr17 70533007 70533044 -18971509 - MIR SINE MIR -112 150 113 957 203 6 0 chr17 70533044 70533221 -18971332 - MER45A DNA AcHobo 0 178 1 185 289 9 61 chr17 70533221 70533297 -18971256 - MIR SINE MIR -149 113 43 253 191 0 0 chr17 70533561 70533575 -18970978 + AluSp SINE Alu 122 135 -168 284 125 0 0 chr17 70533575 70533615 -18970938 + Alu SINE Alu 1 40 -259 2001 133 0 13 chr17 70533694 70534002 -18970551 + AluSx SINE Alu 1 304 -8 447 19 0 0 chr17 70534018 70534070 -18970483 + (TA)n Simple_repeat Simple_repeat 2 53 0 199 321 168 15 chr17 70534516 70534647 -18969906 + MIR3 SINE MIR 5 155 -53 325 268 120 14 chr17 70535152 70535294 -18969259 + L1ME4a LINE L1 5765 5921 -200 2127 118 3 3 chr17 70535324 70535628 -18968925 + AluSx SINE Alu 1 304 -8 1362 183 3 99 chr17 70536254 70536434 -18968119 - AluJo SINE Alu -10 302 167 2173 104 16 0 chr17 70536434 70536741 -18967812 - AluSq SINE Alu -1 312 1 1362 183 3 99 chr17 70536741 70536894 -18967659 - AluJo SINE Alu -145 167 1 183 42 0 0 chr17 70537260 70537284 -18967269 + (TC)n Simple_repeat Simple_repeat 2 25 0 2021 122 7 0 chr17 70537284 70537579 -18966974 - AluSx SINE Alu -14 298 2 186 43 0 0 chr17 70537579 70537602 -18966951 + (TC)n Simple_repeat Simple_repeat 1 23 0 183 246 0 0 chr17 70537602 70537659 -18966894 + (CA)n Simple_repeat Simple_repeat 2 58 0 2203 86 0 7 chr17 70538115 70538407 -18966146 - AluSg SINE Alu -20 290 1 1842 125 25 4 chr17 70538565 70538845 -18965708 + AluJb SINE Alu 9 294 -18 2026 114 0 40 chr17 70538873 70539197 -18965356 - AluSx SINE Alu -1 311 1 274 267 0 0 chr17 70539200 70539260 -18965293 + MIR SINE MIR 90 149 -113 1831 170 40 43 chr17 70541504 70541717 -18962836 - MLT1A2 LTR MaLR -4 370 157 2163 103 0 16 chr17 70541717 70542027 -18962526 - AluSq SINE Alu -8 305 1 1831 170 40 43 chr17 70542027 70542184 -18962369 - MLT1A2 LTR MaLR -217 157 1 279 329 152 22 chr17 70542242 70542808 -18961745 - L2 LINE L2 -28 3244 2603 641 295 85 11 chr17 70542846 70543127 -18961426 - LTR16C LTR ERVL 0 491 190 180 309 64 64 chr17 70544767 70544861 -18959692 + L2 LINE L2 3191 3284 -29 337 325 8 16 chr17 70544892 70545018 -18959535 - MIR SINE MIR -134 128 4 1943 100 8 0 chr17 70545349 70545610 -18958943 + AluSx SINE Alu 31 293 -19 986 164 0 22 chr17 70545706 70545889 -18958664 - FRAM SINE Alu -1 175 1 2450 74 0 0 chr17 70546052 70546362 -18958191 - AluSg SINE Alu 0 310 1 2045 154 0 0 chr17 70546737 70547049 -18957504 + AluSx SINE Alu 1 312 0 1512 163 18 18 chr17 70547058 70547340 -18957213 + AluJo SINE Alu 1 282 -30 543 189 90 41 chr17 70547375 70547497 -18957056 - FLAM_C SINE Alu -8 135 8 186 373 51 34 chr17 70548299 70548417 -18956136 + MIR SINE MIR 34 153 -55 221 279 29 0 chr17 70549725 70549793 -18954760 + GA-rich Low_complexity Low_complexity 2 71 0 21 36 0 0 chr17 70550110 70550138 -18954415 + AT_rich Low_complexity Low_complexity 1 28 0 1751 124 0 57 chr17 70551365 70551696 -18952857 + AluSx SINE Alu 1 314 0 2040 121 6 19 chr17 70551968 70552282 -18952271 - AluSx SINE Alu -2 310 1 336 295 47 47 chr17 70553085 70553214 -18951339 + MIR SINE MIR 46 174 -88 2244 73 7 0 chr17 70553294 70553583 -18950970 - AluSp SINE Alu -22 291 1 281 292 150 0 chr17 70553633 70553746 -18950807 + L2 LINE L2 3171 3300 -13 2074 98 28 0 chr17 70553842 70554129 -18950424 + AluSq SINE Alu 1 295 -18 310 265 0 15 chr17 70554868 70554936 -18949617 - L2 LINE L2 0 3272 3206 444 283 8 0 chr17 70555038 70555158 -18949395 + MIR3 SINE MIR 74 194 -14 203 325 12 12 chr17 70557190 70557273 -18947280 + MIR SINE MIR 38 120 -88 1388 243 6 7 chr17 70557643 70557979 -18946574 + L1ME LINE L1 5398 5727 -435 2213 96 3 26 chr17 70558093 70558406 -18946147 - AluSc SINE Alu -3 306 1 2148 98 0 33 chr17 70558406 70558712 -18945841 - AluSg SINE Alu -13 297 1 261 0 0 0 chr17 70559025 70559054 -18945499 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2467 151 15 18 chr17 70559152 70559549 -18945004 - MSTD LTR MaLR 0 396 1 389 279 9 9 chr17 70559552 70559663 -18944890 + MIR3 SINE MIR 55 165 -43 554 292 10 20 chr17 70560117 70560243 -18944310 + L2 LINE L2 2324 2449 -865 2254 93 7 0 chr17 70560243 70560553 -18944000 - AluSx SINE Alu 0 312 1 554 292 10 20 chr17 70560553 70560621 -18943932 + L2 LINE L2 2449 2516 -798 338 179 0 0 chr17 70561198 70561254 -18943299 - MSTD LTR MaLR -336 60 5 2251 96 0 0 chr17 70561633 70561914 -18942639 + AluSg SINE Alu 1 281 -29 208 0 0 0 chr17 70561914 70561937 -18942616 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 282 262 71 57 chr17 70562332 70562473 -18942080 - MIR SINE MIR -99 163 21 2272 87 3 53 chr17 70563459 70563780 -18940773 + AluSq SINE Alu 1 305 -8 612 224 59 12 chr17 70563811 70563981 -18940572 - MER5B DNA MER1_type 0 178 1 1970 142 3 31 chr17 70564252 70564570 -18939983 + AluJb SINE Alu 1 309 -3 1697 156 222 11 chr17 70565768 70566120 -18938433 - MSTB LTR MaLR 0 426 1 299 312 9 37 chr17 70566155 70566264 -18938289 + MIR SINE MIR 36 141 -67 193 355 0 0 chr17 70566842 70566918 -18937635 + L3 LINE CR1 953 1028 -549 2268 107 3 0 chr17 70566923 70567221 -18937332 + AluSx SINE Alu 1 299 -13 402 283 183 48 chr17 70567238 70567549 -18937004 - L2 LINE L2 0 3272 2920 219 257 200 9 chr17 70567678 70567783 -18936770 - L2 LINE L2 -27 3245 3121 2099 113 40 7 chr17 70568434 70568736 -18935817 + AluSx SINE Alu 1 312 0 919 290 56 35 chr17 70569047 70569085 -18935468 + L3 LINE CR1 1055 1091 -486 2435 78 3 0 chr17 70569085 70569380 -18935173 - AluSq SINE Alu -17 296 1 919 290 56 35 chr17 70569380 70569737 -18934816 + L3 LINE CR1 1091 1458 -119 2051 105 35 0 chr17 70569926 70570211 -18934342 + AluSp SINE Alu 1 295 -18 850 235 87 0 chr17 70570250 70570446 -18934107 + MER58A DNA MER1_type 10 222 -2 2381 88 0 0 chr17 70570698 70570993 -18933560 - AluSc SINE Alu -14 295 1 197 212 121 15 chr17 70571678 70571744 -18932809 + L2 LINE L2 3150 3222 -50 1900 150 7 17 chr17 70571787 70572087 -18932466 - AluJb SINE Alu -15 297 1 2430 87 0 0 chr17 70572101 70572401 -18932152 - AluSq SINE Alu -13 300 1 2417 111 37 0 chr17 70572697 70573048 -18931505 - THE1B LTR MaLR 0 364 1 2476 97 0 0 chr17 70573593 70573904 -18930649 - AluSx SINE Alu -1 311 1 1967 141 0 3 chr17 70574325 70574642 -18929911 + AluSx SINE Alu 1 316 0 1064 163 11 0 chr17 70574642 70574820 -18929733 + AluSg/x SINE Alu 133 312 0 1683 162 8 0 chr17 70575367 70575633 -18928920 + AluSx SINE Alu 1 268 -44 2963 96 31 25 chr17 70575633 70575969 -18928584 + L1PB1 LINE L1 5699 6040 -111 2401 82 3 0 chr17 70575969 70576261 -18928292 + AluSg SINE Alu 1 293 -17 2963 96 31 25 chr17 70576261 70576370 -18928183 + L1PB1 LINE L1 6040 6147 -4 2051 139 0 13 chr17 70576517 70576819 -18927734 + AluSx SINE Alu 1 298 -14 2310 89 0 17 chr17 70578356 70578658 -18925895 - AluSq SINE Alu -16 297 1 2345 140 18 61 chr17 70578704 70578809 -18925744 + MSTA LTR MaLR 4 112 -316 2019 172 0 3 chr17 70578809 70579117 -18925436 - AluJb SINE Alu -5 307 1 2345 140 18 61 chr17 70579117 70579379 -18925174 + MSTA LTR MaLR 112 351 -77 2236 72 21 24 chr17 70579379 70579670 -18924883 - AluY SINE Alu -17 294 5 2345 140 18 61 chr17 70579670 70579745 -18924808 + MSTA LTR MaLR 351 428 0 2380 90 0 0 chr17 70580526 70580825 -18923728 + AluSg SINE Alu 7 305 -5 2008 128 14 60 chr17 70581322 70581675 -18922878 + MER1B DNA MER1_type 1 337 0 2359 98 0 7 chr17 70581695 70582001 -18922552 + AluSx SINE Alu 2 305 -7 2250 132 0 0 chr17 70582429 70582739 -18921814 - AluSx SINE Alu -2 310 1 194 258 16 16 chr17 70582739 70582801 -18921752 - MIR SINE MIR -110 152 91 434 182 20 0 chr17 70584399 70584498 -18920055 + CT-rich Low_complexity Low_complexity 1 101 0 2117 115 3 13 chr17 70584499 70584803 -18919750 - AluSx SINE Alu -11 301 1 2447 93 3 0 chr17 70585626 70585938 -18918615 + AluSq SINE Alu 1 313 0 379 236 158 25 chr17 70586180 70586383 -18918170 + MLT1F LTR MaLR 291 520 -22 225 224 0 0 chr17 70586383 70586432 -18918121 + L2 LINE L2 3224 3272 0 254 250 28 0 chr17 70586620 70586692 -18917861 - MIR SINE MIR -59 149 76 2183 108 6 29 chr17 70586919 70587233 -18917320 + AluSx SINE Alu 1 307 -5 2198 92 7 0 chr17 70587341 70587654 -18916899 + AluSp SINE Alu 1 315 0 2051 122 10 16 chr17 70587878 70588181 -18916372 - AluSg SINE Alu -9 301 1 2365 116 0 0 chr17 70592131 70592442 -18912111 - AluSx SINE Alu 0 312 2 192 77 0 0 chr17 70593370 70593396 -18911157 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 388 278 141 26 chr17 70593468 70593659 -18910894 + MIR SINE MIR 10 222 -40 249 204 194 31 chr17 70594804 70594902 -18909651 - L2 LINE L2 0 3313 3200 1824 138 37 30 chr17 70594936 70595234 -18909319 + AluSx SINE Alu 1 300 -12 2397 97 0 3 chr17 70595360 70595669 -18908884 - AluSx SINE Alu -4 308 1 2212 120 7 0 chr17 70595686 70595985 -18908568 - AluSx SINE Alu -11 301 1 1655 138 67 0 chr17 70597016 70597269 -18907284 + AluJb SINE Alu 5 274 -38 2078 131 0 10 chr17 70598832 70599130 -18905423 - AluSx SINE Alu -15 297 3 412 240 0 10 chr17 70600188 70600284 -18904269 - HAL1b LINE L1 -792 556 462 527 169 0 0 chr17 70600292 70600369 -18904184 + FRAM/FAM SINE Alu 1 71 -105 733 263 33 61 chr17 70600375 70600767 -18903786 - HAL1b LINE L1 -884 464 84 738 183 0 0 chr17 70600775 70600895 -18903658 - FLAM_A SINE Alu -9 124 5 202 171 0 0 chr17 70602046 70602081 -18902472 - L2 LINE L2 -12 3260 3226 * 234 320 47 5 chr17 70602050 70602216 -18902337 - MIR SINE MIR -10 252 1 2461 85 3 0 chr17 70602699 70603004 -18901549 - AluSp SINE Alu -7 306 1 1997 136 0 32 chr17 70603004 70603314 -18901239 - AluJb SINE Alu -12 300 1 23 33 0 0 chr17 70603547 70603577 -18900976 + AT_rich Low_complexity Low_complexity 1 30 0 2182 109 0 0 chr17 70604300 70604585 -18899968 + AluSx SINE Alu 1 285 -27 429 76 0 0 chr17 70604585 70604651 -18899902 + (CA)n Simple_repeat Simple_repeat 2 67 0 1973 156 3 7 chr17 70604966 70605267 -18899286 + AluJo SINE Alu 1 300 -12 1663 85 12 61 chr17 70606145 70606392 -18898161 + AluSq SINE Alu 1 235 -78 220 196 22 0 chr17 70606403 70606449 -18898104 + CT-rich Low_complexity Low_complexity 2 48 0 4870 100 3 9 chr17 70606473 70607166 -18897387 - L1PB1 LINE L1 -3 6148 5460 370 103 44 0 chr17 70607166 70607234 -18897319 + CT-rich Low_complexity Low_complexity 1 71 0 2066 120 13 10 chr17 70607234 70607534 -18897019 - AluSx SINE Alu -11 301 1 463 96 149 0 chr17 70607566 70607655 -18896898 + L1ME LINE L1 5362 5462 -659 520 328 140 4 chr17 70607753 70607982 -18896571 + MIR SINE MIR 3 262 0 23 33 0 0 chr17 70607998 70608028 -18896525 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr17 70608246 70608275 -18896278 + AT_rich Low_complexity Low_complexity 1 29 0 1547 168 56 59 chr17 70608345 70608720 -18895833 - MLT1A2 LTR MaLR 0 374 1 2236 102 10 3 chr17 70609311 70609616 -18894937 + AluSc SINE Alu 1 307 -2 268 326 102 16 chr17 70611754 70611964 -18892589 + MLT1K LTR MaLR 321 588 0 1358 193 9 5 chr17 70612018 70612241 -18892312 + MER58A DNA MER1_type 1 224 0 510 218 32 40 chr17 70612243 70612367 -18892186 + L2 LINE L2 3190 3312 -1 205 300 0 0 chr17 70613376 70613426 -18891127 + L2 LINE L2 3222 3271 -1 249 240 58 123 chr17 70613545 70613699 -18890854 - MIR SINE MIR -8 254 111 192 314 124 25 chr17 70614148 70614463 -18890090 - L2 LINE L2 -1028 2286 1941 763 44 0 0 chr17 70614483 70614573 -18889980 + AluSg/x SINE Alu 217 306 -4 207 343 69 39 chr17 70615340 70615708 -18888845 - L2 LINE L2 -172 3100 2709 949 162 12 9 chr17 70615709 70616058 -18888495 + CT-rich Low_complexity Low_complexity 1 350 0 1299 181 0 64 chr17 70616062 70616360 -18888193 - AluJb SINE Alu 0 312 34 246 301 152 23 chr17 70616851 70617050 -18887503 - MIR SINE MIR -2 260 37 210 362 14 14 chr17 70617085 70617154 -18887399 + L2 LINE L2 3116 3184 -88 186 208 0 0 chr17 70617451 70617499 -18887054 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 1481 135 0 0 chr17 70617510 70617717 -18886836 - AluJb SINE Alu -22 290 84 2137 72 0 0 chr17 70619339 70619604 -18884949 + AluY SINE Alu 44 308 -3 290 321 79 0 chr17 70619688 70619828 -18884725 - L2 LINE L2 -222 3050 2900 223 262 0 78 chr17 70620128 70620231 -18884322 - L2 LINE L2 -778 2536 2442 1752 197 55 30 chr17 70620319 70620684 -18883869 - MLT1A2 LTR MaLR 0 374 1 629 288 56 36 chr17 70621002 70621304 -18883249 + MLT1K LTR MaLR 235 542 -46 243 0 0 0 chr17 70623090 70623117 -18881436 + (CA)n Simple_repeat Simple_repeat 2 28 0 2169 114 3 0 chr17 70623430 70623727 -18880826 - AluSx SINE Alu -14 298 1 228 293 15 53 chr17 70624918 70625051 -18879502 - L2 LINE L2 -1039 2275 2148 2538 71 0 0 chr17 70625153 70625462 -18879091 + AluY SINE Alu 1 309 -2 373 271 110 17 chr17 70625508 70625626 -18878927 + L2 LINE L2 3141 3269 -3 207 88 0 0 chr17 70625686 70625720 -18878833 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 366 202 18 9 chr17 70627129 70627238 -18877315 + (TATG)n Simple_repeat Simple_repeat 2 111 0 199 329 14 29 chr17 70627248 70627318 -18877235 - L2 LINE L2 -88 3184 3116 466 314 100 29 chr17 70627408 70627990 -18876563 + L1 LINE L1 4068 4690 -1456 809 271 17 38 chr17 70628029 70628269 -18876284 - MIR SINE MIR -14 248 14 300 269 105 93 chr17 70628285 70628467 -18876086 + L1 LINE L1 4774 4952 -1194 3102 191 20 41 chr17 70628467 70629106 -18875447 - MLT1E2 LTR MaLR 0 626 1 300 269 105 93 chr17 70629106 70629413 -18875140 + L1 LINE L1 4952 5273 -873 2092 128 21 0 chr17 70629413 70629702 -18874851 - AluSx SINE Alu -17 295 1 300 269 105 93 chr17 70629702 70629780 -18874773 + L1 LINE L1 5273 5349 -797 338 259 134 34 chr17 70630329 70630680 -18873873 + L1MEc LINE L1 792 1134 -5071 346 259 26 43 chr17 70630752 70630868 -18873685 + L1M4 LINE L1 3441 3554 -2592 1264 117 0 0 chr17 70630873 70631035 -18873518 - AluSq SINE Alu -149 164 3 1094 231 52 87 chr17 70631039 70631524 -18873029 + L1M4 LINE L1 3552 4019 -2127 333 249 38 80 chr17 70631513 70631588 -18872965 + L1M4 LINE L1 4311 4388 -1758 * 1894 126 55 17 chr17 70631588 70631881 -18872672 + AluSx SINE Alu 1 304 -8 333 249 38 80 chr17 70631881 70632042 -18872511 + L1M4 LINE L1 4388 4537 -1609 250 143 20 0 chr17 70632044 70632093 -18872460 + L1M4 LINE L1 4622 4671 -1475 382 245 167 10 chr17 70632095 70632197 -18872356 + L2 LINE L2 3147 3264 -8 2215 120 0 3 chr17 70633162 70633470 -18871083 + AluSx SINE Alu 1 307 -5 378 0 0 0 chr17 70634661 70634703 -18869850 + (T)n Simple_repeat Simple_repeat 1 42 0 271 294 0 0 chr17 70635983 70636051 -18868502 + CT-rich Low_complexity Low_complexity 2 69 0 242 237 118 13 chr17 70636055 70636131 -18868422 - L2 LINE L2 -19 3253 3170 2303 109 53 14 chr17 70636211 70636568 -18867985 - THE1C LTR MaLR -4 371 1 206 340 95 43 chr17 70636766 70637092 -18867461 + L2 LINE L2 2014 2356 -958 1921 147 0 25 chr17 70637191 70637511 -18867042 - AluJb SINE Alu 0 312 1 2266 123 0 0 chr17 70637515 70637823 -18866730 - AluSg SINE Alu -2 308 1 404 324 43 16 chr17 70638406 70638591 -18865962 - MIR SINE MIR -29 233 44 2201 104 7 3 chr17 70639293 70639600 -18864953 + AluSg SINE Alu 1 308 -2 199 356 78 22 chr17 70639643 70639733 -18864820 + L2 LINE L2 3138 3232 -40 296 275 94 36 chr17 70640281 70640419 -18864134 + MIR3 SINE MIR 33 178 -30 2359 81 34 0 chr17 70641199 70641494 -18863059 - AluSx SINE Alu -7 305 1 189 0 0 0 chr17 70641645 70641666 -18862887 + (T)n Simple_repeat Simple_repeat 1 21 0 501 273 60 84 chr17 70642441 70642690 -18861863 + MIR SINE MIR 20 262 0 2415 82 0 3 chr17 70642692 70642997 -18861556 - AluSg SINE Alu -6 304 1 189 176 0 44 chr17 70643081 70643149 -18861404 + (TA)n Simple_repeat Simple_repeat 2 66 0 309 252 243 50 chr17 70643813 70644130 -18860423 + MLT1L LTR MaLR 3 380 -235 452 182 45 36 chr17 70644178 70644288 -18860265 + MLT1L LTR MaLR 505 615 0 2404 95 0 0 chr17 70644305 70644599 -18859954 - AluSq SINE Alu -19 294 1 787 268 168 57 chr17 70645553 70645674 -18858879 - L2 LINE L2 0 3313 3207 1909 160 16 20 chr17 70645674 70645980 -18858573 + AluJo SINE Alu 1 305 -7 787 268 168 57 chr17 70645980 70646783 -18857770 - L2 LINE L2 -106 3207 2292 225 267 0 17 chr17 70646853 70646913 -18857640 - Charlie4 DNA MER1_type 0 1961 1903 295 364 27 16 chr17 70647335 70647522 -18857031 + L2 LINE L2 2629 2817 -497 264 360 27 0 chr17 70647626 70647737 -18856816 - MIR SINE MIR -74 188 75 2316 99 3 3 chr17 70647756 70648058 -18856495 - AluSg SINE Alu -8 302 1 250 266 0 51 chr17 70648321 70648400 -18856153 + L2 LINE L2 3193 3267 -5 1300 212 77 18 chr17 70649283 70649609 -18854944 + MLT1A1 LTR MaLR 20 364 -1 325 217 22 33 chr17 70652247 70652339 -18852214 + L1MC5 LINE L1 7842 7932 -29 241 152 0 0 chr17 70652583 70652629 -18851924 - L1ME1 LINE L1 0 6166 6121 1055 173 17 6 chr17 70655150 70655323 -18849230 - FAM SINE Alu 0 175 1 319 118 15 15 chr17 70655590 70655658 -18848895 + (TCC)n Simple_repeat Simple_repeat 2 69 0 301 262 115 91 chr17 70656622 70656874 -18847679 - L2 LINE L2 -670 2644 2387 303 267 12 23 chr17 70656980 70657066 -18847487 - L2 LINE L2 -917 2397 2313 334 289 66 66 chr17 70657122 70657378 -18847175 + L2 LINE L2 2225 2480 -834 2107 97 80 0 chr17 70657418 70657707 -18846846 - AluSx SINE Alu 0 312 1 1577 172 26 63 chr17 70657940 70658176 -18846377 + MER44D DNA MER2_type 1 244 -2247 2783 88 16 14 chr17 70658176 70658539 -18846014 - THE1B LTR MaLR 0 364 1 1577 172 26 63 chr17 70658539 70658650 -18845903 + MER44D DNA MER2_type 244 605 -4 2054 126 51 0 chr17 70658777 70659071 -18845482 + AluSg SINE Alu 1 309 -1 2024 203 73 11 chr17 70659458 70659897 -18844656 + MLT1C LTR MaLR 2 467 0 318 26 0 0 chr17 70659952 70659991 -18844562 + (CA)n Simple_repeat Simple_repeat 2 40 0 1038 259 59 32 chr17 70661108 70661671 -18842882 + L1MC5 LINE L1 7354 7931 -30 729 290 159 6 chr17 70662823 70663157 -18841396 + L2 LINE L2 2524 2908 -406 294 237 151 7 chr17 70663902 70664041 -18840512 - L1ME4a LINE L1 -7 6114 5956 2221 116 39 30 chr17 70664817 70665178 -18839375 - THE1B LTR MaLR 0 364 1 249 250 240 10 chr17 70665546 70665646 -18838907 + MER5A DNA MER1_type 66 188 -1 874 251 78 12 chr17 70666772 70667015 -18837538 + MIR SINE MIR 4 262 0 2467 66 0 7 chr17 70669117 70669419 -18835134 - AluY SINE Alu -11 300 1 289 309 0 0 chr17 70669713 70669797 -18834756 + (CATATA)n Simple_repeat Simple_repeat 4 87 0 2345 82 0 3 chr17 70670988 70671282 -18833271 - AluY SINE Alu -18 293 1 188 288 164 0 chr17 70671557 70671630 -18832923 - L2 LINE L2 0 3272 3188 2303 108 0 13 chr17 70671676 70671992 -18832561 - AluSx SINE Alu 0 312 1 2436 76 0 7 chr17 70673655 70673956 -18830597 + AluSq SINE Alu 1 299 -14 2019 122 0 23 chr17 70674826 70675130 -18829423 + AluSx SINE Alu 3 299 -13 331 317 245 29 chr17 70675149 70676179 -18828374 - L2 LINE L2 -211 3061 1802 986 285 14 0 chr17 70676298 70676519 -18828034 - MIR SINE MIR -21 241 18 2457 77 3 0 chr17 70676541 70676839 -18827714 - AluY SINE Alu -10 301 3 2318 111 0 0 chr17 70677773 70678080 -18826473 - AluSx SINE Alu -5 307 1 23 0 0 0 chr17 70680810 70680833 -18823720 + AT_rich Low_complexity Low_complexity 1 23 0 2044 116 7 4 chr17 70680863 70681139 -18823414 - AluSx SINE Alu -26 286 10 1810 108 108 51 chr17 70681139 70681473 -18823080 - THE1A LTR MaLR -2 353 1 2032 109 51 0 chr17 70681604 70681880 -18822673 + AluSg SINE Alu 1 290 -20 268 192 45 23 chr17 70682350 70682459 -18822094 - L1ME4a LINE L1 -307 5814 5771 446 332 41 38 chr17 70682509 70682876 -18821677 - L1ME4a LINE L1 -2143 5665 5298 302 339 198 19 chr17 70682926 70683502 -18821051 - L2 LINE L2 -616 2698 1952 1095 228 0 5 chr17 70683502 70683726 -18820827 + MER58A DNA MER1_type 2 224 0 302 339 198 19 chr17 70683726 70683905 -18820648 - L2 LINE L2 -1362 1952 1807 2690 102 34 94 chr17 70684161 70684777 -18819776 - Tigger3(Golem) DNA MER2_type -167 2862 2284 462 244 8 47 chr17 70684763 70684890 -18819663 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 358 49 279 0 chr17 70684931 70684992 -18819561 - MADE1 DNA Mariner -2 78 1 25 31 0 0 chr17 70685141 70685173 -18819380 + AT_rich Low_complexity Low_complexity 1 32 0 1287 139 0 20 chr17 70685241 70685488 -18819065 + AluJb SINE Alu 84 326 0 14849 117 41 6 chr17 70686735 70689070 -18815483 - Tigger1 DNA MER2_type 0 2418 1 198 268 0 0 chr17 70689330 70689371 -18815182 - L2 LINE L2 -96 3176 3136 539 289 37 14 chr17 70689385 70689603 -18814950 + MER46C DNA MER2_type 1 223 -115 5359 174 40 93 chr17 70689890 70691426 -18813127 - Charlie1a DNA MER1_type -1 1454 1 836 364 71 28 chr17 70691430 70692205 -18812348 - L2 LINE L2 -499 2815 2008 260 207 24 24 chr17 70693341 70693423 -18811130 + HAL1b LINE L1 314 395 -953 500 242 104 26 chr17 70693507 70694202 -18810351 + HAL1b LINE L1 426 1333 -15 584 262 84 75 chr17 70694389 70694844 -18809709 + MLT1H LTR MaLR 1 515 -34 2398 89 0 0 chr17 70694986 70695279 -18809274 + AluSx SINE Alu 2 294 -18 230 224 158 31 chr17 70695522 70695750 -18808803 - L1ME4a LINE L1 -76 6045 5789 206 240 0 0 chr17 70695800 70695850 -18808703 + L2 LINE L2 3264 3313 0 272 204 0 80 chr17 70695931 70696019 -18808534 - L1ME4a LINE L1 -498 5623 5543 792 276 15 34 chr17 70696522 70696786 -18807767 + MIR SINE MIR 4 262 0 26 30 0 0 chr17 70697052 70697085 -18807468 + AT_rich Low_complexity Low_complexity 1 33 0 1371 88 70 0 chr17 70697803 70698018 -18806535 - L1P LINE L1 -2546 3600 3371 1321 173 31 0 chr17 70699275 70699529 -18805024 + L1PA16 LINE L1 5896 6157 -9 32 0 0 0 chr17 70699537 70699569 -18804984 + AT_rich Low_complexity Low_complexity 1 32 0 21 71 0 0 chr17 70699712 70699754 -18804799 + AT_rich Low_complexity Low_complexity 1 42 0 339 265 0 0 chr17 70701356 70701473 -18803080 + L1ME LINE L1 5706 5822 -299 187 259 123 12 chr17 70701639 70701720 -18802833 - MIR3 SINE MIR -107 101 12 234 200 15 46 chr17 70702334 70702399 -18802154 + MLT1I LTR MaLR 314 376 -33 416 246 36 14 chr17 70702431 70702569 -18801984 - MLT1K LTR MaLR -50 538 398 1906 296 173 23 chr17 70702740 70703972 -18800581 + L2 LINE L2 327 1743 -1571 1965 155 6 19 chr17 70704073 70704435 -18800118 + THE1C LTR MaLR 19 375 0 23 54 0 0 chr17 70704465 70704502 -18800051 + AT_rich Low_complexity Low_complexity 1 37 0 23 68 0 0 chr17 70705213 70705257 -18799296 + AT_rich Low_complexity Low_complexity 1 44 0 784 213 97 39 chr17 70705691 70705949 -18798604 + AluJo SINE Alu 40 312 0 448 274 11 86 chr17 70705954 70706140 -18798413 - MIR SINE MIR -77 185 14 383 308 7 53 chr17 70706166 70706352 -18798201 + MIR SINE MIR 16 190 -65 652 107 9 9 chr17 70706891 70707003 -18797550 + MSTB1 LTR MaLR 305 416 -16 1524 196 8 32 chr17 70707036 70707116 -18797437 - MSTB1-int LTR MaLR -1286 365 285 273 75 0 0 chr17 70707116 70707156 -18797397 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1524 196 8 32 chr17 70707156 70707448 -18797105 - MSTB1-int LTR MaLR -1366 285 2 2013 149 93 3 chr17 70707450 70707838 -18796715 - MSTB1 LTR MaLR -1 431 9 180 0 0 0 chr17 70708864 70708884 -18795669 + (CA)n Simple_repeat Simple_repeat 2 21 0 2343 100 0 0 chr17 70708992 70709292 -18795261 - AluSx SINE Alu -12 300 1 3459 129 13 5 chr17 70709445 70710049 -18794504 + L1P LINE L1 1870 2478 -3668 2385 84 3 0 chr17 70710047 70710390 -18794163 + L1P LINE L1 4889 5232 -914 * 6204 82 13 0 chr17 70710490 70711460 -18793093 + L1PA8A LINE L1 5128 6118 -13 26 0 0 0 chr17 70711460 70711486 -18793067 + AT_rich Low_complexity Low_complexity 1 26 0 303 400 29 19 chr17 70712163 70712368 -18792185 + L2 LINE L2 2428 2634 -680 214 324 27 14 chr17 70713298 70713372 -18791181 - MIR SINE MIR -164 98 24 294 188 69 7 chr17 70713538 70713704 -18790849 - LTR37B LTR ERV1 -3 423 271 29 47 0 0 chr17 70713704 70713747 -18790806 + AT_rich Low_complexity Low_complexity 1 43 0 1056 180 14 5 chr17 70713749 70713966 -18790587 - L1MA4 LINE L1 -14 6286 6068 26 74 0 0 chr17 70714185 70714239 -18790314 + AT_rich Low_complexity Low_complexity 1 54 0 237 203 31 0 chr17 70714498 70714562 -18789991 + A-rich Low_complexity Low_complexity 1 66 0 233 254 0 0 chr17 70716070 70716125 -18788428 + L1MC/D LINE L1 5821 5875 -484 30 27 0 0 chr17 70716167 70716204 -18788349 + AT_rich Low_complexity Low_complexity 1 37 0 401 219 63 11 chr17 70716542 70716694 -18787859 + MLT1A1 LTR MaLR 1 230 -135 267 244 115 13 chr17 70716898 70717054 -18787499 - L1MEd LINE L1 -5055 1064 893 24 0 0 0 chr17 70717079 70717103 -18787450 + AT_rich Low_complexity Low_complexity 1 24 0 1074 118 0 0 chr17 70717136 70717312 -18787241 - AluSq SINE Alu 0 316 141 4877 164 48 13 chr17 70717412 70718757 -18785796 + L1MA4 LINE L1 4904 6297 -3 1896 171 24 19 chr17 70720840 70721209 -18783344 + THE1C LTR MaLR 1 371 -4 7581 120 55 8 chr17 70721215 70722383 -18782170 + THE1C-int LTR MaLR 3 1225 -355 3956 28 0 7 chr17 70722483 70722946 -18781607 - L1PA5 LINE L1 -217 5937 5478 267 285 180 23 chr17 70723433 70723605 -18780948 + L2 LINE L2 2431 2629 -685 360 247 0 82 chr17 70726835 70726932 -18777621 - L2 LINE L2 -2 3311 3223 337 261 40 9 chr17 70726951 70727061 -18777492 - L1MC4 LINE L1 -1113 6696 6557 39 22 0 0 chr17 70727061 70727107 -18777446 + AT_rich Low_complexity Low_complexity 1 46 0 264 145 0 43 chr17 70727135 70727204 -18777349 + (TA)n Simple_repeat Simple_repeat 2 67 0 234 0 0 0 chr17 70727494 70727520 -18777033 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 740 238 139 4 chr17 70727520 70727801 -18776752 + LTR54B LTR ERV1 179 497 -1 748 267 82 21 chr17 70727813 70728229 -18776324 - L2 LINE L2 -121 3192 2743 1575 306 10 2 chr17 70729531 70729936 -18774617 - L1PA13 LINE L1 -6369 418 11 1624 173 7 21 chr17 70729957 70730277 -18774276 - AluJb SINE Alu 0 320 5 49 42 0 31 chr17 70730297 70730393 -18774160 + AT_rich Low_complexity Low_complexity 1 93 0 4907 77 21 1 chr17 70730465 70731138 -18773415 - L1PA8 LINE L1 -3 6169 5484 382 332 69 14 chr17 70731336 70731553 -18773000 + L1MC4a LINE L1 5357 5585 -577 331 214 87 19 chr17 70731623 70731726 -18772827 + L1MC4a LINE L1 5772 5881 -1927 508 58 26 79 chr17 70734340 70734530 -18770023 + (TA)n Simple_repeat Simple_repeat 1 180 0 275 283 0 0 chr17 70734712 70734772 -18769781 + MER89-int LTR ERV1 5266 5325 -1476 382 132 11 154 chr17 70735127 70735218 -18769335 + MER70-int LTR ERVL 2502 2579 -2444 386 111 0 0 chr17 70735225 70735279 -18769274 + MER70A LTR ERVL 419 472 0 21 0 0 0 chr17 70735301 70735322 -18769231 + AT_rich Low_complexity Low_complexity 1 21 0 266 229 0 29 chr17 70735490 70735560 -18768993 + MLT1K LTR MaLR 195 262 -326 297 329 24 55 chr17 70736188 70736352 -18768201 - MIR SINE MIR -48 214 56 226 368 21 0 chr17 70736874 70736969 -18767584 + Charlie8 DNA MER1_type 1 97 -2320 371 206 35 99 chr17 70738771 70738796 -18765757 - MIR SINE MIR -93 169 144 2304 95 0 16 chr17 70738796 70739112 -18765441 - AluSq SINE Alu -2 311 1 371 206 35 99 chr17 70739112 70739227 -18765326 - MIR SINE MIR -118 144 38 2144 88 25 0 chr17 70739271 70739594 -18764959 - AluSg SINE Alu 0 330 1 198 325 135 8 chr17 70740415 70740541 -18764012 - MIR SINE MIR -63 199 58 402 183 14 0 chr17 70740727 70740798 -18763755 - L1MD2 LINE L1 -209 6150 6079 1959 98 0 4 chr17 70740979 70741245 -18763308 + AluSq SINE Alu 49 313 0 797 284 52 13 chr17 70743608 70743840 -18760713 - MIR SINE MIR -1 261 21 2203 87 0 7 chr17 70744276 70744562 -18759991 + AluY SINE Alu 1 284 -27 207 0 0 0 chr17 70744573 70744596 -18759957 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 452 254 136 30 chr17 70744627 70744796 -18759757 + MIR SINE MIR 16 202 -60 243 88 0 0 chr17 70745462 70745496 -18759057 + (TG)n Simple_repeat Simple_repeat 2 35 0 262 300 28 26 chr17 70746007 70746152 -18758401 + GA-rich Low_complexity Low_complexity 1 145 0 890 238 93 30 chr17 70746391 70746820 -18757733 - HAL1 LINE L1 -1009 1498 1043 607 196 15 23 chr17 70746830 70746963 -18757590 - MIR SINE MIR -109 153 22 585 154 0 0 chr17 70747000 70747110 -18757443 + (TCCA)n Simple_repeat Simple_repeat 3 112 0 714 245 252 35 chr17 70747219 70747738 -18756815 - HAL1 LINE L1 -1603 904 273 612 248 0 8 chr17 70747938 70748067 -18756486 - MER5B DNA MER1_type -49 129 2 320 294 39 20 chr17 70748067 70748169 -18756384 - HAL1 LINE L1 -2401 106 3 213 313 31 16 chr17 70748264 70748328 -18756225 + L2 LINE L2 3111 3175 -97 274 239 0 14 chr17 70748754 70748825 -18755728 - MIR SINE MIR -6 256 187 834 258 65 63 chr17 70749024 70749371 -18755182 - L2 LINE L2 -54 3259 2894 1865 136 18 0 chr17 70749371 70749696 -18754857 + AluSx SINE Alu 1 330 0 834 258 65 63 chr17 70749696 70749855 -18754698 - L2 LINE L2 -419 2894 2737 1880 157 126 18 chr17 70749855 70749882 -18754671 - MSTA LTR MaLR 0 426 403 1712 87 53 4 chr17 70749882 70750147 -18754406 + L1PA11 LINE L1 5897 6174 0 1880 157 126 18 chr17 70750147 70750529 -18754024 - MSTA LTR MaLR -23 403 1 2982 256 150 51 chr17 70750529 70751175 -18753378 - L2 LINE L2 -572 2742 2161 2265 99 0 7 chr17 70751175 70751477 -18753076 + AluSx SINE Alu 11 310 -2 2982 256 150 51 chr17 70751477 70751924 -18752629 - L2 LINE L2 -1153 2161 1760 1403 161 87 56 chr17 70751924 70752302 -18752251 + MLT1B LTR MaLR 1 390 0 2982 256 150 51 chr17 70752302 70752615 -18751938 - L2 LINE L2 -1554 1760 1196 602 193 55 0 chr17 70753061 70753170 -18751383 - FLAM_A SINE Alu -18 115 1 249 119 0 0 chr17 70753214 70753256 -18751297 + (TAG)n Simple_repeat Simple_repeat 2 43 0 4000 91 9 2 chr17 70753909 70754459 -18750094 + MER41A LTR ERV1 1 554 0 32 57 0 0 chr17 70754511 70754564 -18749989 + AT_rich Low_complexity Low_complexity 1 53 0 266 246 27 9 chr17 70754679 70754789 -18749764 + L1MCa LINE L1 92 203 -6193 392 253 0 0 chr17 70754875 70754962 -18749591 - Tigger5 DNA MER2_type 0 2323 2237 286 148 0 37 chr17 70754972 70755026 -18749527 - Tigger5 DNA MER2_type -2268 55 4 4525 246 28 9 chr17 70755037 70756305 -18748248 - L1M4 LINE L1 -1724 4422 3132 669 182 45 23 chr17 70756311 70756443 -18748110 - FLAM_A SINE Alu 0 142 8 247 159 29 0 chr17 70756449 70756518 -18748035 - L1M4 LINE L1 -3000 3146 3076 915 194 23 11 chr17 70756637 70756812 -18747741 - L1MCa LINE L1 -5886 540 364 3219 214 21 2 chr17 70756812 70757524 -18747029 + L1M2a LINE L1 1984 2727 -4839 1751 220 51 45 chr17 70757548 70758354 -18746199 + L1M2a LINE L1 3295 4100 -3465 8464 164 83 45 chr17 70758355 70760790 -18743763 + L1MCa LINE L1 302 2813 -3402 417 101 0 15 chr17 70760894 70760972 -18743581 + L1M3d LINE L1 2653 2729 -4757 11487 199 44 22 chr17 70760981 70762718 -18741835 + L1M3d LINE L1 3295 5127 -2438 2662 132 7 23 chr17 70762718 70763157 -18741396 - Tigger2a DNA MER2_type 0 434 3 11487 199 44 22 chr17 70763157 70764470 -18740083 + L1M3d LINE L1 5127 6409 -1156 820 167 51 13 chr17 70764468 70764624 -18739929 - L1MCa LINE L1 -6244 182 21 * 2079 217 69 24 chr17 70764695 70764850 -18739703 + L1MEc LINE L1 1202 1349 -4866 180 0 0 0 chr17 70764850 70764870 -18739683 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2079 217 69 24 chr17 70764870 70765586 -18738967 + L1MEc LINE L1 1349 2031 -4184 492 84 0 0 chr17 70765586 70765657 -18738896 + Alu SINE Alu 233 303 -7 2079 217 69 24 chr17 70765657 70766441 -18738112 + L1MEc LINE L1 2031 2778 -3437 1651 180 3 27 chr17 70766441 70766741 -18737812 + AluJo SINE Alu 1 293 -19 2079 217 69 24 chr17 70766741 70767284 -18737269 + L1MEc LINE L1 2778 3543 -2672 279 0 0 0 chr17 70767284 70767315 -18737238 + (CA)n Simple_repeat Simple_repeat 2 32 0 183 156 0 0 chr17 70767582 70767614 -18736939 + (ATG)n Simple_repeat Simple_repeat 2 33 0 281 312 128 0 chr17 70767670 70767795 -18736758 - MIR SINE MIR -48 214 74 377 225 49 5 chr17 70768141 70768261 -18736292 + L1ME1 LINE L1 6059 6181 -3 2233 116 0 7 chr17 70768490 70768791 -18735762 + AluSx SINE Alu 1 299 -13 274 214 12 12 chr17 70770097 70770181 -18734372 - L1ME4a LINE L1 -225 5896 5813 2183 118 0 3 chr17 70770195 70770491 -18734062 - AluSx SINE Alu -16 296 2 2287 60 32 0 chr17 70770933 70771214 -18733339 - AluY SINE Alu -21 290 1 823 305 58 16 chr17 70771275 70771639 -18732914 - L1ME4a LINE L1 -333 5788 5410 743 227 76 11 chr17 70771652 70771837 -18732716 + MLT1J LTR MaLR 13 209 -302 386 189 28 66 chr17 70771967 70772073 -18732480 + MLT1J LTR MaLR 410 511 0 30 45 0 0 chr17 70772408 70772452 -18732101 + AT_rich Low_complexity Low_complexity 1 44 0 243 241 0 37 chr17 70772871 70772925 -18731628 + L2 LINE L2 3201 3252 -61 180 77 0 0 chr17 70772953 70772979 -18731574 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 918 186 0 19 chr17 70773546 70773702 -18730851 + FRAM SINE Alu 4 156 -20 5734 94 50 2 chr17 70775855 70777673 -18726880 + L1PA16 LINE L1 4290 6163 -3 2103 205 14 27 chr17 70777772 70778285 -18726268 + L1M4 LINE L1 5296 5801 -373 276 250 242 24 chr17 70778573 70778697 -18725856 + MIR SINE MIR 2 152 -110 2107 122 3 0 chr17 70779173 70779467 -18725086 - AluSg SINE Alu -15 295 1 3884 158 30 24 chr17 70779477 70780232 -18724321 - L1MB7 LINE L1 0 6184 5425 1177 167 24 119 chr17 70780234 70780605 -18723948 - L1MB7 LINE L1 -908 5238 4903 * 1926 196 38 14 chr17 70780600 70781105 -18723448 - L1MB7 LINE L1 -1482 4664 4148 244 307 55 6 chr17 70781094 70781257 -18723296 - L1P1 LINE L1 -660 5495 5325 * 1723 186 6 6 chr17 70781262 70781574 -18722979 - AluJo SINE Alu 0 312 1 1710 297 84 21 chr17 70781709 70781887 -18722666 - L1 LINE L1 -1304 4842 4677 1789 159 7 10 chr17 70781887 70782176 -18722377 + AluJo SINE Alu 1 288 -24 1710 297 84 21 chr17 70782176 70783531 -18721022 - L1 LINE L1 -1469 4677 3179 256 334 220 47 chr17 70783682 70784574 -18719979 + L2 LINE L2 2174 3222 -50 261 253 42 21 chr17 70786047 70786142 -18718411 + MER5A DNA MER1_type 93 189 0 180 284 75 99 chr17 70787649 70787850 -18716703 - L2 LINE L2 -23 3290 3095 476 118 26 0 chr17 70787858 70787934 -18716619 - L1MC1 LINE L1 -502 5831 5754 2155 62 18 0 chr17 70787934 70788210 -18716343 + L1PA11 LINE L1 5893 6173 -1 594 232 48 0 chr17 70788731 70788856 -18715697 - L2 LINE L2 -8 3305 3175 287 300 237 9 chr17 70789261 70789578 -18714975 + L2 LINE L2 2261 2649 -665 536 248 16 16 chr17 70789592 70789717 -18714836 + L2 LINE L2 3189 3313 0 483 246 104 41 chr17 70789719 70789939 -18714614 - MIR SINE MIR -28 234 1 437 279 191 23 chr17 70789985 70790200 -18714353 - MIR SINE MIR -5 257 7 2124 122 0 10 chr17 70790228 70790545 -18714008 + AluSx SINE Alu 1 312 0 367 168 27 15 chr17 70791247 70791331 -18713222 + FRAM SINE Alu 46 102 -64 1571 162 0 73 chr17 70791449 70791788 -18712765 + AluJb SINE Alu 1 317 0 3883 185 35 47 chr17 70794819 70795781 -18708772 - L1MB7 LINE L1 -21 6661 5709 1593 167 65 0 chr17 70795781 70796056 -18708497 - AluJb SINE Alu -19 293 1 3883 185 35 47 chr17 70796056 70796262 -18708291 - L1MB7 LINE L1 -973 5709 5502 655 243 77 0 chr17 70796275 70796444 -18708109 - L1MB7 LINE L1 -4684 1962 1781 * 2076 138 24 82 chr17 70796440 70796902 -18707651 - L1MB7 LINE L1 -5304 1238 804 362 214 0 0 chr17 70796894 70796964 -18707589 - L1MB7 LINE L1 -6468 74 5 * 352 355 50 9 chr17 70796992 70797212 -18707341 + L2 LINE L2 2125 2353 -961 180 413 107 8 chr17 70797369 70797490 -18707063 + L2 LINE L2 3125 3257 -15 904 281 105 61 chr17 70797496 70798066 -18706487 + MLT1G1 LTR MaLR 1 595 0 1673 170 50 0 chr17 70799564 70799846 -18704707 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 70800683 70800704 -18703849 + AT_rich Low_complexity Low_complexity 1 21 0 198 250 80 45 chr17 70800845 70800933 -18703620 - L2 LINE L2 0 3272 3182 1838 161 104 27 chr17 70801073 70801189 -18703364 + MSTD LTR MaLR 3 109 -287 2047 126 139 13 chr17 70801189 70801569 -18702984 + MSTA LTR MaLR 1 428 0 9612 129 22 35 chr17 70801571 70803169 -18701384 + MSTA-int LTR MaLR 3 1580 0 1953 135 83 67 chr17 70803169 70803590 -18700963 + MSTA LTR MaLR 1 428 0 1838 161 104 27 chr17 70803590 70803835 -18700718 + MSTD LTR MaLR 108 396 0 1920 305 166 20 chr17 70803844 70804953 -18699600 - L2 LINE L2 -337 2977 1707 293 241 90 45 chr17 70805006 70805139 -18699414 + MLT1J LTR MaLR 107 245 -266 315 212 0 15 chr17 70805290 70805356 -18699197 + MLT1I LTR MaLR 327 391 -18 1596 309 128 25 chr17 70805401 70806289 -18698264 - L2 LINE L2 -1637 1677 698 2447 80 0 0 chr17 70806702 70807001 -18697552 - AluY SINE Alu -12 299 1 337 281 195 0 chr17 70808266 70808430 -18696123 + MIR SINE MIR 56 251 -11 228 284 81 14 chr17 70808839 70808913 -18695640 - MIR SINE MIR -89 119 41 250 254 428 0 chr17 70809089 70809262 -18695291 + MIR SINE MIR 13 259 -3 442 231 0 10 chr17 70809443 70809547 -18695006 + Tigger6 DNA MER2_type 21 123 -1474 5516 231 62 19 chr17 70809587 70810849 -18693704 - L1M4 LINE L1 -842 5304 4097 579 151 25 0 chr17 70810849 70810968 -18693585 - L1MB7 LINE L1 0 6184 6063 5516 231 62 19 chr17 70810968 70810991 -18693562 - L1M4 LINE L1 -2049 4097 4076 1429 86 0 5 chr17 70810991 70811189 -18693364 - L1PB1 LINE L1 -1 6150 5954 5516 231 62 19 chr17 70811189 70811609 -18692944 - L1M4 LINE L1 -2070 4076 3526 22 70 0 0 chr17 70811843 70811886 -18692667 + AT_rich Low_complexity Low_complexity 1 43 0 2798 215 47 21 chr17 70814127 70814806 -18689747 + L1MC4a LINE L1 7112 7808 0 191 301 103 37 chr17 70815069 70815205 -18689348 + L2 LINE L2 3159 3303 -10 381 70 0 0 chr17 70816183 70816240 -18688313 + (TA)n Simple_repeat Simple_repeat 1 57 0 2425 100 0 0 chr17 70816240 70816550 -18688003 - AluSx SINE Alu -2 310 1 34 42 0 0 chr17 70816767 70816815 -18687738 + AT_rich Low_complexity Low_complexity 1 48 0 1190 226 77 16 chr17 70816991 70817314 -18687239 + MER2 DNA MER2_type 1 343 -1 3228 231 121 12 chr17 70817520 70819209 -18685344 + L1ME1 LINE L1 4220 6115 -51 2517 151 18 16 chr17 70819525 70819975 -18684578 + L1MB3 LINE L1 5489 5939 -244 605 191 70 0 chr17 70819975 70820090 -18684463 - MER1B DNA MER1_type 0 339 217 * 627 137 59 0 chr17 70820079 70820181 -18684372 - MER1B DNA MER1_type -189 108 1 935 152 50 15 chr17 70820182 70820380 -18684173 + L1MB3 LINE L1 5933 6137 -46 26 0 0 0 chr17 70820387 70820413 -18684140 + AT_rich Low_complexity Low_complexity 1 26 0 2154 151 41 31 chr17 70821510 70822051 -18682502 + MLT2A2 LTR ERVL 1 554 0 1436 266 88 42 chr17 70822057 70822832 -18681721 + L2 LINE L2 2458 3259 -54 596 275 95 67 chr17 70822974 70823363 -18681190 + MLT1J LTR MaLR 112 511 0 21 0 0 0 chr17 70823407 70823428 -18681125 + AT_rich Low_complexity Low_complexity 1 21 0 320 279 0 0 chr17 70823437 70823516 -18681037 - L1 LINE L1 -2310 3836 3758 424 295 30 6 chr17 70823617 70823774 -18680779 - L1ME LINE L1 -482 5639 5480 21 71 0 0 chr17 70823788 70823830 -18680723 + AT_rich Low_complexity Low_complexity 1 42 0 606 339 74 30 chr17 70824838 70825310 -18679243 + L1M3b LINE L1 1216 1708 -5788 1294 269 52 27 chr17 70825752 70825974 -18678579 + L1M3b LINE L1 2310 2525 -4971 2502 66 0 0 chr17 70825974 70826277 -18678276 + AluY SINE Alu 1 303 -8 1294 269 52 27 chr17 70826277 70826568 -18677985 + L1M3b LINE L1 2525 2836 -4660 13160 167 11 8 chr17 70826569 70829902 -18674651 + L1PA14 LINE L1 2668 6161 0 14583 181 29 38 chr17 70829907 70831495 -18673058 + L1MA4 LINE L1 2579 4180 -3539 10126 70 51 5 chr17 70831495 70832808 -18671745 + SVA Other Other 13 1385 -1 14583 181 29 38 chr17 70832808 70836493 -18668060 + L1MA4 LINE L1 4180 7713 -6 213 39 0 0 chr17 70836598 70836624 -18667929 + (CA)n Simple_repeat Simple_repeat 2 27 0 564 47 58 0 chr17 70837646 70837732 -18666821 + L1PA16 LINE L1 6075 6165 -1 336 254 37 63 chr17 70838685 70838867 -18665686 + L1ME LINE L1 5259 5432 -689 233 270 51 95 chr17 70838979 70839102 -18665451 + L1ME LINE L1 5617 5744 -377 1927 136 31 0 chr17 70839102 70839388 -18665165 + AluSx SINE Alu 1 295 -17 233 270 51 95 chr17 70839388 70839432 -18665121 + L1ME LINE L1 5744 5788 -333 2233 83 7 3 chr17 70839432 70839721 -18664832 + AluSc SINE Alu 1 290 -19 233 270 51 95 chr17 70839721 70839736 -18664817 + L1ME LINE L1 5788 5802 -319 2129 121 7 3 chr17 70839736 70840041 -18664512 + AluSp SINE Alu 1 306 -7 233 270 51 95 chr17 70840041 70840171 -18664382 + L1ME LINE L1 5802 5917 -204 1984 56 0 4 chr17 70841256 70841520 -18663033 - AluY SINE Alu 0 310 48 372 306 99 0 chr17 70841531 70841642 -18662911 - L2 LINE L2 -1 3271 3150 608 279 127 38 chr17 70842300 70842695 -18661858 - L2 LINE L2 -26 3287 2858 201 295 0 0 chr17 70843235 70843296 -18661257 + CT-rich Low_complexity Low_complexity 3 63 0 2343 110 0 0 chr17 70844570 70844879 -18659674 + AluSx SINE Alu 1 309 -3 1569 290 11 34 chr17 70844993 70845559 -18658994 + L2 LINE L2 2377 2929 -385 622 114 12 60 chr17 70846856 70847023 -18657530 + (TTCC)n Simple_repeat Simple_repeat 1 159 0 855 104 6 49 chr17 70847026 70847209 -18657344 + (TCCC)n Simple_repeat Simple_repeat 2 176 0 279 215 31 77 chr17 70847296 70847426 -18657127 - L1ME3A LINE L1 -203 5967 5844 * 881 249 15 12 chr17 70847424 70847758 -18656795 - L1M4 LINE L1 -2964 3182 2848 1935 184 21 21 chr17 70847762 70848147 -18656406 - MLT1C LTR MaLR -2 465 81 2257 102 0 0 chr17 70848147 70848441 -18656112 + AluSg1 SINE Alu 1 294 -15 333 318 59 59 chr17 70848521 70848760 -18655793 - L1M4 LINE L1 -3316 2830 2592 1670 180 25 0 chr17 70850480 70850763 -18653790 + AluJb SINE Alu 1 290 -22 733 145 8 0 chr17 70851304 70851421 -18653132 - L1PB4 LINE L1 -7 6149 6032 1320 137 41 112 chr17 70851645 70851801 -18652752 - Tigger1 DNA MER2_type 0 2418 2293 1570 50 0 20 chr17 70851801 70852002 -18652551 + MER107 DNA MER1_type 1 197 0 1320 137 41 112 chr17 70852002 70852159 -18652394 - Tigger1 DNA MER2_type -125 2293 2127 548 117 0 0 chr17 70852159 70852236 -18652317 - AluSg SINE Alu -231 79 3 629 313 56 13 chr17 70852339 70852729 -18651824 - L1M4 LINE L1 -2375 3771 3365 418 311 81 33 chr17 70852782 70853178 -18651375 - L1M4 LINE L1 -2368 3778 3364 250 174 29 0 chr17 70853444 70853513 -18651040 - L1M4 LINE L1 -3161 2985 2915 476 263 169 44 chr17 70853783 70853860 -18650693 + L1ME3A LINE L1 3816 3882 -2264 2220 117 7 0 chr17 70853860 70854168 -18650385 + AluSg SINE Alu 1 310 0 476 263 169 44 chr17 70854168 70854425 -18650128 + L1ME3A LINE L1 3882 4106 -2040 1999 110 19 45 chr17 70854425 70854735 -18649818 + AluSg SINE Alu 1 302 -8 476 263 169 44 chr17 70854735 70855033 -18649520 + L1ME3A LINE L1 4106 4528 -1618 376 296 83 35 chr17 70855203 70855433 -18649120 + L1ME3A LINE L1 4745 4985 -1161 2344 186 47 17 chr17 70855440 70855967 -18648586 + L1MB8 LINE L1 5630 6172 -6 886 287 68 18 chr17 70855974 70856555 -18647998 + L1ME3A LINE L1 4982 5607 -557 434 232 67 24 chr17 70856672 70856836 -18647717 + L1ME3A LINE L1 5782 5952 -218 2322 77 3 0 chr17 70857005 70857290 -18647263 + AluY SINE Alu 1 286 -25 26 30 0 0 chr17 70857659 70857692 -18646861 + AT_rich Low_complexity Low_complexity 1 33 0 2161 68 71 14 chr17 70858184 70858478 -18646075 + AluY SINE Alu 1 311 0 2243 76 14 3 chr17 70858560 70858851 -18645702 + AluSc SINE Alu 1 294 -15 504 0 0 0 chr17 70859612 70859668 -18644885 + (TG)n Simple_repeat Simple_repeat 2 57 0 2045 134 0 0 chr17 70859750 70860040 -18644513 - AluJb SINE Alu -22 290 1 7502 171 120 20 chr17 70860598 70862144 -18642409 + MER52A LTR ERV1 55 1755 0 40 49 0 0 chr17 70862704 70862765 -18641788 + AT_rich Low_complexity Low_complexity 1 61 0 1902 149 3 10 chr17 70862917 70863218 -18641335 + AluSq SINE Alu 3 301 -12 2400 68 0 19 chr17 70864274 70864583 -18639970 - AluY SINE Alu -8 303 1 706 40 0 20 chr17 70864713 70864813 -18639740 + (GAAA)n Simple_repeat Simple_repeat 3 100 0 22 35 0 0 chr17 70865168 70865197 -18639356 + AT_rich Low_complexity Low_complexity 1 29 0 2187 76 28 17 chr17 70866055 70866343 -18638210 + AluY SINE Alu 1 291 -20 28 0 0 0 chr17 70866343 70866371 -18638182 + AT_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr17 70866822 70866865 -18637688 + AT_rich Low_complexity Low_complexity 1 43 0 208 296 74 94 chr17 70868757 70868960 -18635593 - MIR SINE MIR -30 232 34 303 331 6 54 chr17 70870372 70870538 -18634015 - HAL1b LINE L1 -443 905 748 767 275 119 52 chr17 70870760 70871313 -18633240 - HAL1 LINE L1 -610 1897 1308 365 256 125 59 chr17 70871508 70871813 -18632740 - HAL1 LINE L1 -1431 1076 752 685 261 108 32 chr17 70871991 70872305 -18632248 + LTR16C LTR ERVL 154 491 0 2258 172 47 58 chr17 70872535 70873071 -18631482 + L1MA9 LINE L1 5783 6312 0 1583 208 65 37 chr17 70873794 70874223 -18630330 + MLT1D LTR MaLR 64 504 -1 332 285 115 37 chr17 70874253 70874688 -18629865 + HAL1 LINE L1 843 1311 -1196 275 255 57 32 chr17 70874739 70874896 -18629657 - L1M4 LINE L1 -1706 4440 4280 2130 108 3 7 chr17 70875633 70875930 -18628623 + AluY SINE Alu 1 296 -15 186 43 0 0 chr17 70876100 70876123 -18628430 + (TG)n Simple_repeat Simple_repeat 1 23 0 232 358 0 0 chr17 70877007 70877088 -18627465 + L2 LINE L2 3176 3256 -16 260 331 103 17 chr17 70877697 70877872 -18626681 - L2 LINE L2 -14 3299 3110 206 103 0 26 chr17 70877959 70877998 -18626555 + (TA)n Simple_repeat Simple_repeat 1 38 0 2021 121 0 27 chr17 70878067 70878365 -18626188 - AluSg SINE Alu -20 290 1 526 330 252 10 chr17 70878365 70878968 -18625585 - L2 LINE L2 -529 2785 2037 2495 68 7 0 chr17 70879405 70879714 -18624839 - AluSp SINE Alu -2 311 1 224 273 91 13 chr17 70883069 70883146 -18621407 + L2 LINE L2 3172 3254 -18 207 222 19 37 chr17 70884103 70884157 -18620396 - MIR SINE MIR -63 199 147 342 279 139 0 chr17 70885713 70885835 -18618718 + L2 LINE L2 3134 3272 0 604 290 265 39 chr17 70885943 70886784 -18617769 + L2 LINE L2 2158 3192 -80 373 243 75 0 chr17 70886793 70886900 -18617653 + MER91C DNA MER1_type 1 115 -25 22 0 0 0 chr17 70888188 70888210 -18616343 + AT_rich Low_complexity Low_complexity 1 22 0 201 229 114 14 chr17 70889818 70889888 -18614665 + MIR SINE MIR 80 156 -106 280 300 20 10 chr17 70889944 70890044 -18614509 + MIR SINE MIR 162 262 0 241 296 191 33 chr17 70890358 70890510 -18614043 + MIR3 SINE MIR 19 194 -14 26 82 0 0 chr17 70891209 70891270 -18613283 + AT_rich Low_complexity Low_complexity 1 61 0 13321 79 11 14 chr17 70898234 70900346 -18604207 + L1PA7 LINE L1 3562 5683 -471 2141 103 0 51 chr17 70900346 70900658 -18603895 + AluY SINE Alu 1 296 -15 13321 79 11 14 chr17 70900658 70901121 -18603432 + L1PA7 LINE L1 5683 6146 -8 23 0 0 0 chr17 70901288 70901311 -18603242 + AT_rich Low_complexity Low_complexity 1 23 0 227 125 25 0 chr17 70903057 70903097 -18601456 - MER116 DNA Mariner -1 79 39 2174 102 10 0 chr17 70903115 70903410 -18601143 + AluSp SINE Alu 3 300 -13 383 355 18 18 chr17 70904127 70904296 -18600257 - L3 LINE CR1 -1 1576 1408 1924 224 94 51 chr17 70905683 70906247 -18598306 + HAL1b LINE L1 443 1054 -294 816 176 0 0 chr17 70906247 70906378 -18598175 + FLAM_C SINE Alu 3 133 0 1924 224 94 51 chr17 70906378 70906630 -18597923 + HAL1b LINE L1 1054 1294 -54 376 377 52 30 chr17 70906708 70907299 -18597254 - ERVL LTR ERVL -3916 1848 1245 527 54 0 130 chr17 70907613 70907705 -18596848 + MADE1 DNA Mariner 1 80 0 220 113 38 57 chr17 70908785 70908838 -18595715 + (TTAA)n Simple_repeat Simple_repeat 3 54 0 2041 272 222 54 chr17 70909191 70910202 -18594351 + L2 LINE L2 1414 2254 -1059 2351 103 0 13 chr17 70910202 70910514 -18594039 + AluSg SINE Alu 1 308 -2 2041 272 222 54 chr17 70910514 70910949 -18593604 + L2 LINE L2 2254 2615 -698 420 20 0 0 chr17 70910949 70910998 -18593555 + (TG)n Simple_repeat Simple_repeat 1 49 0 2041 272 222 54 chr17 70910998 70911145 -18593408 + L2 LINE L2 2615 3313 0 1470 200 3 42 chr17 70911235 70911545 -18593008 - AluJo SINE Alu -14 298 1 241 298 143 0 chr17 70911882 70911966 -18592587 + L2 LINE L2 3160 3255 -17 2316 92 3 25 chr17 70912593 70912910 -18591643 + AluSx SINE Alu 1 310 -2 223 256 22 89 chr17 70913666 70913756 -18590797 + MIR3 SINE MIR 97 180 -28 201 365 32 45 chr17 70914438 70914594 -18589959 - L3 LINE CR1 -128 1449 1296 * 507 284 16 75 chr17 70914590 70914761 -18589792 + MIR SINE MIR 20 200 -62 2111 120 0 7 chr17 70914761 70915061 -18589492 + AluSx SINE Alu 1 298 -14 488 67 44 0 chr17 70915061 70915151 -18589402 + (TA)n Simple_repeat Simple_repeat 2 95 0 507 284 16 75 chr17 70915151 70915240 -18589313 + MIR SINE MIR 198 260 -2 747 317 258 7 chr17 70915319 70916017 -18588536 - L3 LINE CR1 -381 1196 324 23 33 0 0 chr17 70916579 70916609 -18587944 + AT_rich Low_complexity Low_complexity 1 30 0 313 281 91 8 chr17 70916711 70916832 -18587721 - L1ME LINE L1 -496 5625 5495 32 26 0 0 chr17 70917011 70917050 -18587503 + AT_rich Low_complexity Low_complexity 1 39 0 931 181 0 0 chr17 70918098 70918253 -18586300 + FRAM SINE Alu 2 156 -10 278 277 90 50 chr17 70918537 70918676 -18585877 - L1MC/D LINE L1 -302 5819 5755 2418 81 0 0 chr17 70918676 70918974 -18585579 - AluY SINE Alu -13 298 1 278 277 90 50 chr17 70918974 70919146 -18585407 - L1MC/D LINE L1 -366 5755 5591 342 279 67 50 chr17 70919224 70919464 -18585089 - HAL1 LINE L1 -19 2488 2245 2458 108 37 0 chr17 70919730 70920081 -18584472 + THE1B LTR MaLR 1 364 0 600 278 137 19 chr17 70920412 70920675 -18583878 + MLT1I LTR MaLR 99 392 -17 681 300 66 69 chr17 70920758 70921129 -18583424 + L2 LINE L2 2768 3147 -166 2178 109 0 0 chr17 70921129 70921438 -18583115 + AluSx SINE Alu 1 309 0 681 300 66 69 chr17 70921438 70921604 -18582949 + L2 LINE L2 3147 3312 -1 1965 123 40 65 chr17 70921640 70922038 -18582515 + MSTB LTR MaLR 1 388 -38 21 71 0 0 chr17 70922213 70922255 -18582298 + AT_rich Low_complexity Low_complexity 1 42 0 28 29 0 0 chr17 70922389 70922424 -18582129 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr17 70922545 70922570 -18581983 + AT_rich Low_complexity Low_complexity 1 25 0 3852 183 37 25 chr17 70922697 70923312 -18581241 + L1MB8 LINE L1 5212 5846 -332 1580 167 0 25 chr17 70923312 70923594 -18580959 + AluJo SINE Alu 34 308 -4 3852 183 37 25 chr17 70923594 70923932 -18580621 + L1MB8 LINE L1 5846 6178 0 471 320 109 52 chr17 70923942 70924457 -18580096 + L2 LINE L2 2766 3308 -5 12464 219 41 39 chr17 70925869 70927180 -18577373 + L1MA7 LINE L1 1 1308 -5187 2662 138 19 2 chr17 70927180 70927601 -18576952 - MSTA LTR MaLR 0 428 1 12464 219 41 39 chr17 70927601 70928605 -18575948 + L1MA7 LINE L1 1308 2309 -4186 2019 154 0 0 chr17 70928605 70928898 -18575655 + AluSx SINE Alu 1 293 -19 12464 219 41 39 chr17 70928898 70929462 -18575091 + L1MA7 LINE L1 2309 2870 -3625 1985 136 24 35 chr17 70929462 70929838 -18574715 - THE1C LTR MaLR -3 372 1 12464 219 41 39 chr17 70929838 70931480 -18573073 + L1MA7 LINE L1 2870 4507 -1988 6869 55 5 47 chr17 70931480 70933130 -18571423 + SVA Other Other 1 1384 -2 12464 219 41 39 chr17 70933130 70933516 -18571037 + L1MA7 LINE L1 4507 4891 -1604 2217 119 0 0 chr17 70933516 70933809 -18570744 - AluSx SINE Alu -19 293 1 12464 219 41 39 chr17 70933809 70935737 -18568816 + L1MA7 LINE L1 4891 6492 -3 25 0 0 0 chr17 70935737 70935762 -18568791 + AT_rich Low_complexity Low_complexity 1 25 0 34 24 0 0 chr17 70935920 70935961 -18568592 + AT_rich Low_complexity Low_complexity 1 41 0 1035 135 5 49 chr17 70936465 70936650 -18567903 - AluSg/x SINE Alu 0 312 136 2195 110 24 24 chr17 70936739 70937075 -18567478 + MER1B DNA MER1_type 2 337 0 226 209 75 15 chr17 70937446 70937513 -18567040 - MLT1J LTR MaLR -438 73 3 218 269 26 13 chr17 70937776 70937854 -18566699 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 2860 161 31 1 chr17 70938124 70938718 -18565835 - L1PA13 LINE L1 -4212 2585 1963 1491 162 30 7 chr17 70938704 70939028 -18565525 + L1PA8A LINE L1 5790 6163 -9 * 1337 214 47 23 chr17 70939276 70939575 -18564978 - AluJo SINE Alu -6 306 1 1822 263 46 39 chr17 70939784 70940343 -18564210 - L1ME3A LINE L1 -220 5950 5396 2407 93 0 0 chr17 70940343 70940644 -18563909 - AluSq SINE Alu -12 301 1 1822 263 46 39 chr17 70940644 70941732 -18562821 - L1ME3A LINE L1 -774 5396 4299 270 271 14 0 chr17 70942008 70942078 -18562475 + L2 LINE L2 3201 3271 -1 22 35 0 0 chr17 70943261 70943290 -18561263 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr17 70943859 70943880 -18560673 + AT_rich Low_complexity Low_complexity 1 21 0 381 328 159 9 chr17 70944630 70944862 -18559691 - L1ME LINE L1 -359 5762 5496 5687 252 40 9 chr17 70944947 70945397 -18559156 - L1ME LINE L1 -1513 4633 4198 369 0 0 0 chr17 70945397 70945438 -18559115 + (TAG)n Simple_repeat Simple_repeat 1 41 0 5687 252 40 9 chr17 70945438 70946870 -18557683 - L1ME LINE L1 -1948 4198 2693 2556 193 35 16 chr17 70947070 70947838 -18556715 - L1ME1 LINE L1 -260 5906 5128 974 149 10 25 chr17 70948015 70948216 -18556337 + L1PBa LINE L1 3 200 -6663 * 9406 123 49 6 chr17 70948208 70950845 -18553708 + L1PBa LINE L1 625 3501 -3361 4095 91 30 10 chr17 70950845 70951096 -18553457 + L1PB1 LINE L1 5536 5781 -370 279 79 0 0 chr17 70951096 70951134 -18553419 + (CA)n Simple_repeat Simple_repeat 2 39 0 4095 91 30 10 chr17 70951134 70951484 -18553069 + L1PB1 LINE L1 5781 6151 0 29 28 0 0 chr17 70951484 70951520 -18553033 + AT_rich Low_complexity Low_complexity 1 36 0 472 160 128 0 chr17 70951553 70951647 -18552906 - Tigger7 DNA MER2_type 0 2587 2482 1379 174 0 0 chr17 70951660 70951890 -18552663 - Tigger7 DNA MER2_type -475 230 1 413 310 76 41 chr17 70952743 70953033 -18551520 - HAL1b LINE L1 -571 777 478 3003 197 152 14 chr17 70953088 70953851 -18550702 + MER52A LTR ERV1 238 1105 -650 4321 178 26 36 chr17 70953854 70954714 -18549839 + MER52A LTR ERV1 905 1755 0 370 348 82 0 chr17 70954837 70955070 -18549483 + L1ME2 LINE L1 5706 5957 -207 978 212 85 35 chr17 70955156 70955472 -18549081 + MER2 DNA MER2_type 1 332 -13 2325 150 28 7 chr17 70956558 70956985 -18547568 + L1MB7 LINE L1 5748 6183 -1 541 269 62 78 chr17 70957240 70957294 -18547259 - MIR SINE MIR -9 253 200 2368 84 42 25 chr17 70957294 70957650 -18546903 + THE1B LTR MaLR 3 364 0 541 269 62 78 chr17 70957650 70957851 -18546702 - MIR SINE MIR -62 200 2 270 0 0 0 chr17 70958372 70958402 -18546151 + (TG)n Simple_repeat Simple_repeat 2 31 0 363 259 60 0 chr17 70959282 70959398 -18545155 + MER117 DNA MER1_type 7 129 -68 1966 144 17 0 chr17 70960216 70960515 -18544038 - AluJo SINE Alu -8 304 1 289 193 0 0 chr17 70961570 70961627 -18542926 + L1M4 LINE L1 4537 4593 -1553 343 182 15 0 chr17 70961637 70961703 -18542850 + MLT1D LTR MaLR 276 342 -163 317 287 74 9 chr17 70963391 70963499 -18541054 - MIR SINE MIR -120 142 28 212 377 65 0 chr17 70963669 70963746 -18540807 - L2 LINE L2 -5 3267 3186 1178 192 0 18 chr17 70963782 70964006 -18540547 - AluSg/x SINE Alu -15 297 78 283 248 62 16 chr17 70964070 70964289 -18540264 + (CATA)n Simple_repeat Simple_repeat 1 229 0 267 289 51 26 chr17 70964251 70964407 -18540146 + (CATG)n Simple_repeat Simple_repeat 3 162 0 * 268 270 46 29 chr17 70964469 70964643 -18539910 + (CATA)n Simple_repeat Simple_repeat 4 180 0 257 255 81 13 chr17 70964718 70964867 -18539686 + (CATG)n Simple_repeat Simple_repeat 2 160 0 242 187 56 9 chr17 70964882 70964989 -18539564 + (CATG)n Simple_repeat Simple_repeat 1 112 0 318 213 60 0 chr17 70965065 70965215 -18539338 + (CATG)n Simple_repeat Simple_repeat 1 159 0 321 288 46 13 chr17 70965331 70965484 -18539069 + (CATA)n Simple_repeat Simple_repeat 3 160 0 * 340 247 45 32 chr17 70965470 70965624 -18538929 + (CATG)n Simple_repeat Simple_repeat 3 158 0 225 195 21 95 chr17 70965739 70965993 -18538560 + (CATTA)n Simple_repeat Simple_repeat 1 235 0 393 207 62 21 chr17 70966066 70966211 -18538342 + (CATG)n Simple_repeat Simple_repeat 4 154 0 343 235 80 19 chr17 70966232 70966394 -18538159 + (TATG)n Simple_repeat Simple_repeat 4 175 0 2955 248 67 12 chr17 70966446 70967444 -18537109 + L1ME1 LINE L1 2305 3357 -2789 2297 99 10 0 chr17 70967460 70967764 -18536789 - AluSq SINE Alu -6 307 1 1694 193 50 18 chr17 70967768 70968333 -18536220 + L1ME1 LINE L1 4943 5521 -645 742 222 28 81 chr17 70968331 70968615 -18535938 + L1ME1 LINE L1 5892 6160 -6 * 759 263 126 22 chr17 70968623 70968770 -18535783 + L1MC4 LINE L1 5363 5493 -2315 1920 161 7 7 chr17 70968770 70969075 -18535478 - AluJb SINE Alu -7 305 1 759 263 126 22 chr17 70969075 70970127 -18534426 + L1MC4 LINE L1 5493 6617 -1191 318 262 6 17 chr17 70970148 70970239 -18534314 + L1MC4 LINE L1 6619 6740 -1290 324 232 43 38 chr17 70970242 70970427 -18534126 + L1M4 LINE L1 2855 3040 -3106 2351 91 3 7 chr17 70971428 70971736 -18532817 - AluSx SINE Alu -5 307 1 375 257 171 9 chr17 70972093 70972198 -18532355 + MIR SINE MIR 2 123 -139 1736 148 3 85 chr17 70972357 70972491 -18532062 + AluJo SINE Alu 1 144 -168 2006 145 0 0 chr17 70972491 70972781 -18531772 + AluSq SINE Alu 1 290 -23 1736 148 3 85 chr17 70972781 70972964 -18531589 + AluJo SINE Alu 144 292 -20 396 286 21 69 chr17 70973085 70973274 -18531279 + MIR SINE MIR 20 199 -63 1458 182 42 26 chr17 70973932 70974239 -18530314 - AluJo SINE Alu 0 312 1 207 315 34 82 chr17 70975163 70975309 -18529244 + L2 LINE L2 2885 3023 -290 1566 121 24 129 chr17 70975474 70975814 -18528739 - AluYb8 SINE Alu -14 304 1 340 231 104 37 chr17 70976119 70976253 -18528300 - Tigger8 DNA MER2_type -169 497 355 1854 141 0 0 chr17 70976263 70976532 -18528021 - AluSx SINE Alu -2 310 42 28 0 0 0 chr17 70976594 70976622 -18527931 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr17 70976732 70976764 -18527789 + AT_rich Low_complexity Low_complexity 1 32 0 1061 96 26 0 chr17 70976765 70976921 -18527632 - L1MA3 LINE L1 0 6305 6146 2981 175 5 5 chr17 70977385 70977940 -18526613 + L1MB5 LINE L1 5619 6173 -1 260 183 83 0 chr17 70977967 70978027 -18526526 - Charlie8 DNA MER1_type -1000 1417 1353 2223 178 42 5 chr17 70978094 70978499 -18526054 + MSTB LTR MaLR 3 422 -4 343 252 168 0 chr17 70978594 70978713 -18525840 - L1M4 LINE L1 -2949 3197 3059 357 266 55 41 chr17 70978717 70978935 -18525618 - L1M4 LINE L1 -3142 3004 2784 714 259 40 5 chr17 70979000 70979201 -18525352 - Charlie8 DNA MER1_type -2209 208 1 24 32 0 0 chr17 70979382 70979413 -18525140 + AT_rich Low_complexity Low_complexity 1 31 0 372 353 79 12 chr17 70979672 70979924 -18524629 - L2 LINE L2 -1405 1909 1641 212 288 51 0 chr17 70981609 70981668 -18522885 + L2 LINE L2 3251 3312 -1 7286 180 41 19 chr17 70982274 70983641 -18520912 + L1M3f LINE L1 2 1436 -4892 2218 99 0 34 chr17 70983641 70983963 -18520590 + AluY SINE Alu 1 311 0 7286 180 41 19 chr17 70983963 70984922 -18519631 + L1M3f LINE L1 1436 2372 -3956 3033 217 57 14 chr17 70984925 70985759 -18518794 + L1M1 LINE L1 19 1003 -6562 22 35 0 0 chr17 70985865 70985894 -18518659 + AT_rich Low_complexity Low_complexity 1 29 0 3987 71 4 2 chr17 70987630 70988150 -18516403 - L1PA10 LINE L1 -3 6165 5645 1937 214 112 8 chr17 70988187 70988668 -18515885 + L1ME3A LINE L1 5640 6170 0 1651 198 3 7 chr17 70989024 70989327 -18515226 - AluJo SINE Alu -10 302 1 332 279 22 52 chr17 70989652 70989788 -18514765 + LTR33 LTR ERVL 5 136 -385 2177 126 37 26 chr17 70990413 70990762 -18513791 + THE1B LTR MaLR 12 364 0 342 0 0 0 chr17 70990828 70990866 -18513687 + (TG)n Simple_repeat Simple_repeat 2 39 0 326 175 12 25 chr17 70990962 70991042 -18513511 + L1PB4 LINE L1 6070 6148 -8 234 363 41 20 chr17 70991284 70991430 -18513123 + L2 LINE L2 2573 2721 -593 1952 127 3 11 chr17 70991629 70991912 -18512641 + AluSx SINE Alu 5 285 -27 22 70 0 0 chr17 70992248 70992291 -18512262 + AT_rich Low_complexity Low_complexity 1 43 0 237 139 0 0 chr17 70992754 70992790 -18511763 + L1ME3 LINE L1 6014 6049 -113 * 551 124 6 152 chr17 70992763 70992801 -18511752 + L1MB7 LINE L1 6033 6075 -109 1901 159 0 10 chr17 70992801 70993109 -18511444 + AluJb SINE Alu 6 310 -2 551 124 6 152 chr17 70993109 70993248 -18511305 + L1MB7 LINE L1 6075 6184 0 23 0 0 0 chr17 70993363 70993386 -18511167 + AT_rich Low_complexity Low_complexity 1 23 0 667 242 60 51 chr17 70993388 70993603 -18510950 - MIR SINE MIR -30 232 16 2286 78 3 20 chr17 70993893 70994199 -18510354 - AluY SINE Alu -10 301 1 5359 88 13 5 chr17 70994262 70995033 -18509520 - L1PA13 LINE L1 0 6163 5387 908 134 67 21 chr17 70995914 70996108 -18508445 - L1 LINE L1 -749 5397 5195 1989 115 62 12 chr17 70998339 70998660 -18505893 + MER1B DNA MER1_type 1 337 0 2226 83 0 36 chr17 70998898 70999200 -18505353 + AluSg SINE Alu 1 291 -19 22 0 0 0 chr17 71000744 71000766 -18503787 + AT_rich Low_complexity Low_complexity 1 22 0 2337 92 0 0 chr17 71001024 71001317 -18503236 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr17 71001789 71001811 -18502742 + AT_rich Low_complexity Low_complexity 1 22 0 205 286 0 0 chr17 71002151 71002193 -18502360 + L2 LINE L2 3242 3283 -30 378 155 14 0 chr17 71002748 71002819 -18501734 - L1MA9 LINE L1 -1 6311 6240 14876 206 95 24 chr17 71002824 71003062 -18501491 - L1MA8 LINE L1 -2 6940 6720 1393 204 43 0 chr17 71003062 71003342 -18501211 - AluJo SINE Alu -20 292 1 14876 206 95 24 chr17 71003342 71003890 -18500663 - L1MA8 LINE L1 -222 6720 6212 387 0 0 0 chr17 71003890 71003933 -18500620 + (TG)n Simple_repeat Simple_repeat 2 44 0 14876 206 95 24 chr17 71003933 71009607 -18494946 - L1MA8 LINE L1 -730 6212 4 627 183 17 0 chr17 71009613 71009733 -18494820 - L1 LINE L1 -2291 3855 3734 456 284 19 86 chr17 71010058 71010371 -18494182 - HAL1b LINE L1 -663 685 394 497 295 148 5 chr17 71011567 71011784 -18492769 + MIR SINE MIR 15 262 0 190 393 84 19 chr17 71012117 71012224 -18492329 + L2 LINE L2 3151 3264 -8 2150 122 0 3 chr17 71012420 71012716 -18491837 + AluSg SINE Alu 2 296 -14 232 337 29 27 chr17 71013149 71013266 -18491287 + MIR3 SINE MIR 61 178 -30 213 143 0 71 chr17 71013656 71013698 -18490855 - MIR3 SINE MIR -43 165 127 180 0 0 0 chr17 71014008 71014028 -18490525 + (CAA)n Simple_repeat Simple_repeat 2 21 0 234 361 19 9 chr17 71015123 71015231 -18489322 + L2 LINE L2 3199 3307 -6 4105 247 41 62 chr17 71015525 71017127 -18487426 + L1PB4 LINE L1 5 1762 -5088 2294 98 3 7 chr17 71017127 71017433 -18487120 + AluY SINE Alu 1 305 -6 4105 247 41 62 chr17 71017433 71018553 -18486000 + L1PB4 LINE L1 1762 2905 -3945 7729 171 38 26 chr17 71018565 71020981 -18483572 + L1PB4 LINE L1 4384 6851 -8 1168 190 80 59 chr17 71021304 71021641 -18482912 + MER2 DNA MER2_type 1 344 0 2061 139 0 3 chr17 71021792 71022093 -18482460 + AluSx SINE Alu 1 300 -12 300 158 0 0 chr17 71022638 71022695 -18481858 + GA-rich Low_complexity Low_complexity 2 58 0 34 42 0 0 chr17 71022729 71022777 -18481776 + AT_rich Low_complexity Low_complexity 1 48 0 23 54 0 0 chr17 71023261 71023298 -18481255 + AT_rich Low_complexity Low_complexity 1 37 0 1570 188 3 24 chr17 71024113 71024439 -18480114 + AluJo SINE Alu 1 320 0 282 301 165 0 chr17 71024946 71025049 -18479504 - L2 LINE L2 -1 3312 3193 21 36 0 0 chr17 71025358 71025386 -18479167 + AT_rich Low_complexity Low_complexity 1 28 0 1591 168 87 11 chr17 71026172 71026458 -18478095 - AluJb SINE Alu -2 310 3 1825 133 63 0 chr17 71026714 71026999 -18477554 - AluSx SINE Alu -9 303 1 1080 265 167 5 chr17 71028055 71028573 -18475980 + L2 LINE L2 2690 3299 -14 1238 233 4 8 chr17 71028586 71028826 -18475727 - MER8 DNA MER2_type 0 239 1 1843 134 29 35 chr17 71029489 71029672 -18474881 - AluSx SINE Alu 0 312 130 282 56 0 0 chr17 71029672 71029708 -18474845 + (TA)n Simple_repeat Simple_repeat 2 37 0 1843 134 29 35 chr17 71029708 71029838 -18474715 - AluSx SINE Alu -182 130 1 1419 158 40 0 chr17 71030134 71030381 -18474172 + L1MB1 LINE L1 5481 5737 -431 1571 129 43 0 chr17 71030399 71030655 -18473898 + L1PBa LINE L1 2 268 -6595 2194 187 16 0 chr17 71030655 71031082 -18473471 + L1MB1 LINE L1 5735 6168 0 511 315 23 46 chr17 71031195 71031414 -18473139 - MIR SINE MIR -1 261 48 28 48 0 0 chr17 71031949 71031991 -18472562 + AT_rich Low_complexity Low_complexity 1 42 0 201 208 13 65 chr17 71032032 71032109 -18472444 + CT-rich Low_complexity Low_complexity 1 73 0 737 97 0 0 chr17 71032726 71032829 -18471724 + AluSc SINE Alu 206 308 -1 275 372 87 34 chr17 71033580 71034018 -18470535 - L2 LINE L2 -655 2659 2199 309 96 0 77 chr17 71034211 71034263 -18470290 + Alu SINE Alu 236 283 -17 1985 272 94 13 chr17 71034408 71035179 -18469374 - L1ME3A LINE L1 -122 6048 5159 1790 144 26 20 chr17 71035179 71035484 -18469069 - AluSx SINE Alu 0 312 6 1985 272 94 13 chr17 71035484 71035795 -18468758 - L1ME3A LINE L1 -1011 5159 4874 698 166 138 14 chr17 71036054 71036199 -18468354 + MER6B DNA MER2_type 48 210 0 4473 172 28 40 chr17 71036199 71036766 -18467787 + L1MC3 LINE L1 6618 7190 -595 2105 130 7 3 chr17 71036766 71037067 -18467486 + AluSx SINE Alu 1 302 -10 4473 172 28 40 chr17 71037067 71037565 -18466988 + L1MC3 LINE L1 7190 7783 -2 1373 224 110 5 chr17 71037816 71038253 -18466300 + Charlie4a DNA MER1_type 24 506 -2 25 0 0 0 chr17 71038911 71038936 -18465617 + AT_rich Low_complexity Low_complexity 1 25 0 32 0 0 0 chr17 71038982 71039014 -18465539 + AT_rich Low_complexity Low_complexity 1 32 0 2288 169 71 8 chr17 71039095 71039575 -18464978 + L1MB3 LINE L1 5673 6182 -1 243 222 83 0 chr17 71039604 71039676 -18464877 + L1ME LINE L1 5255 5332 -848 2092 130 3 0 chr17 71039775 71040067 -18464486 - AluJo SINE Alu -19 293 1 250 221 105 47 chr17 71040083 71040169 -18464384 + L1ME LINE L1 5484 5574 -588 403 171 110 140 chr17 71040218 71040482 -18464071 - MER112 DNA MER1_type 0 256 1 1308 208 12 0 chr17 71040490 71040731 -18463822 + Charlie1b DNA MER1_type 1 244 -279 2471 78 0 0 chr17 71040731 71041039 -18463514 - AluY SINE Alu -3 308 1 22 88 0 0 chr17 71041214 71041271 -18463282 + AT_rich Low_complexity Low_complexity 1 57 0 1337 250 36 43 chr17 71041288 71041756 -18462797 + MLT1C LTR MaLR 3 467 0 2279 95 10 0 chr17 71041806 71042111 -18462442 - AluSx SINE Alu -4 308 1 226 167 62 0 chr17 71042301 71042349 -18462204 + L1M4 LINE L1 4093 4143 -2003 500 282 107 41 chr17 71042514 71042552 -18462001 + L1M4 LINE L1 4612 4646 -1500 1079 226 83 31 chr17 71042552 71042879 -18461674 + MER2 DNA MER2_type 1 344 0 500 282 107 41 chr17 71042879 71043303 -18461250 + L1M4 LINE L1 4646 5116 -1030 2180 120 3 0 chr17 71043303 71043603 -18460950 - AluSx SINE Alu -11 301 1 500 282 107 41 chr17 71043603 71043674 -18460879 + L1M4 LINE L1 5116 5181 -965 352 251 91 55 chr17 71044133 71044162 -18460391 + L1MEc LINE L1 979 1005 -5391 1977 139 3 3 chr17 71044162 71044450 -18460103 + AluSx SINE Alu 1 288 -24 352 251 91 55 chr17 71044450 71044639 -18459914 + L1MEc LINE L1 1005 1205 -5191 246 354 0 0 chr17 71044883 71044979 -18459574 - HAL1b LINE L1 -881 467 372 513 297 48 0 chr17 71045112 71045257 -18459296 - HAL1 LINE L1 -1995 512 361 649 277 117 8 chr17 71045352 71045608 -18458945 - HAL1 LINE L1 -2132 375 92 1254 211 51 0 chr17 71045689 71045945 -18458608 - AluJb SINE Alu -15 297 29 30 45 0 0 chr17 71046057 71046101 -18458452 + AT_rich Low_complexity Low_complexity 1 44 0 340 303 101 48 chr17 71046101 71046289 -18458264 - MIR SINE MIR -61 201 4 1702 143 0 7 chr17 71046533 71046805 -18457748 - MER47A DNA MER2_type 0 366 97 515 180 130 20 chr17 71046806 71046906 -18457647 + MER47A DNA MER2_type 3 113 -253 500 169 0 12 chr17 71046944 71047027 -18457526 - Tigger5 DNA MER2_type -2241 82 1 1970 164 0 0 chr17 71047519 71047823 -18456730 + AluSx SINE Alu 1 304 -8 1894 118 50 0 chr17 71047919 71048198 -18456355 + AluSg SINE Alu 6 298 -12 22 0 0 0 chr17 71048198 71048220 -18456333 + AT_rich Low_complexity Low_complexity 1 22 0 2157 118 0 3 chr17 71049446 71049751 -18454802 - AluSx SINE Alu -8 304 1 274 189 38 0 chr17 71050577 71050630 -18453923 - L2 LINE L2 0 3272 3218 445 359 105 34 chr17 71050954 71050995 -18453558 - L2 LINE L2 -348 2966 2929 2979 166 38 21 chr17 71050995 71051599 -18452954 + L1MB7 LINE L1 5553 6166 -18 445 359 105 34 chr17 71051599 71052025 -18452528 - L2 LINE L2 -385 2929 2466 183 309 62 0 chr17 71052202 71052283 -18452270 - L2 LINE L2 -999 2315 2230 351 0 0 0 chr17 71052452 71052491 -18452062 + (CA)n Simple_repeat Simple_repeat 2 40 0 1859 143 20 3 chr17 71052507 71052801 -18451752 + AluSx SINE Alu 4 302 -10 5858 111 24 0 chr17 71053123 71053260 -18451293 + L1PA16 LINE L1 4567 4699 -1467 1887 146 10 19 chr17 71053260 71053568 -18450985 + AluJo SINE Alu 1 305 -7 5858 111 24 0 chr17 71053568 71054988 -18449565 + L1PA16 LINE L1 4699 6157 -9 4531 153 16 31 chr17 71055006 71056263 -18448290 + L1MA6 LINE L1 4548 5800 -500 234 0 0 0 chr17 71056263 71056289 -18448264 + (CA)n Simple_repeat Simple_repeat 2 27 0 4531 153 16 31 chr17 71056289 71056536 -18448017 + L1MA6 LINE L1 5800 6049 -251 2182 115 32 29 chr17 71056537 71056911 -18447642 + THE1C LTR MaLR 1 375 0 1387 144 8 0 chr17 71056990 71057246 -18447307 + L1MA6 LINE L1 6043 6300 0 312 245 197 27 chr17 71057452 71057599 -18446954 + L1ME4a LINE L1 5943 6114 -7 1799 125 14 4 chr17 71058061 71058342 -18446211 + L1PB3 LINE L1 5864 6147 -7 264 361 54 19 chr17 71058486 71058691 -18445862 + L2 LINE L2 2831 3042 -230 241 237 66 13 chr17 71058880 71058956 -18445597 + L2 LINE L2 3193 3272 0 22 0 0 0 chr17 71059040 71059062 -18445491 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 71059513 71059534 -18445019 + AT_rich Low_complexity Low_complexity 1 21 0 507 300 84 21 chr17 71059916 71060106 -18444447 - MIR3 SINE MIR -4 204 3 2511 63 0 0 chr17 71060323 71060622 -18443931 - AluY SINE Alu -12 299 1 270 106 0 0 chr17 71061256 71061303 -18443250 + (CA)n Simple_repeat Simple_repeat 2 48 0 369 0 0 0 chr17 71061710 71061751 -18442802 + (CA)n Simple_repeat Simple_repeat 2 42 0 753 159 51 64 chr17 71062991 71063148 -18441405 + FAM SINE Alu 4 158 -17 25 31 0 0 chr17 71063764 71063796 -18440757 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr17 71064198 71064226 -18440327 + AT_rich Low_complexity Low_complexity 1 28 0 207 146 0 0 chr17 71064504 71064545 -18440008 + (TGGA)n Simple_repeat Simple_repeat 1 41 0 332 335 80 54 chr17 71065500 71065724 -18438829 + MIR SINE MIR 28 257 -5 2323 227 49 48 chr17 71066684 71067392 -18437161 - L1MC4 LINE L1 0 8042 7334 203 273 11 11 chr17 71067601 71067689 -18436864 + (TA)n Simple_repeat Simple_repeat 1 88 0 377 294 177 8 chr17 71067828 71068076 -18436477 + L1MEc LINE L1 40 329 -6067 1083 250 75 69 chr17 71068503 71069276 -18435277 + L1MEc LINE L1 666 1433 -4963 2425 94 0 0 chr17 71069276 71069585 -18434968 + AluSc SINE Alu 1 309 0 1083 250 75 69 chr17 71069585 71070346 -18434207 + L1MEc LINE L1 1433 2305 -4091 9250 177 132 11 chr17 71070378 71072465 -18432088 + L1PBa LINE L1 6 2345 -4518 1784 238 33 8 chr17 71072458 71072937 -18431616 - L1 LINE L1 -873 5273 4783 * 2259 111 3 0 chr17 71072941 71073247 -18431306 - AluSc SINE Alu 0 309 3 2592 106 76 0 chr17 71073251 71073684 -18430869 - L1PBa LINE L1 -3959 2904 2439 836 115 58 75 chr17 71073678 71073852 -18430701 + L1P4 LINE L1 5358 5528 -638 * 893 134 0 0 chr17 71073852 71073971 -18430582 + AluSq/x SINE Alu 2 120 -192 233 261 138 0 chr17 71073971 71074101 -18430452 + L1ME3A LINE L1 5659 5806 -2002 7129 49 3 6 chr17 71074200 71075865 -18428688 + L1PA7 LINE L1 4491 6151 -3 33 0 0 0 chr17 71075866 71075899 -18428654 + AT_rich Low_complexity Low_complexity 1 33 0 277 310 26 65 chr17 71076018 71076173 -18428380 + L1ME3A LINE L1 5963 6111 -59 2197 117 0 0 chr17 71076330 71076621 -18427932 + AluSg SINE Alu 3 293 -17 368 82 0 0 chr17 71076751 71076800 -18427753 + U5 snRNA snRNA 2 50 -66 204 40 0 0 chr17 71076925 71076950 -18427603 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 2078 142 3 0 chr17 71077175 71077471 -18427082 + AluSx SINE Alu 1 297 -15 29 28 0 0 chr17 71077537 71077573 -18426980 + AT_rich Low_complexity Low_complexity 1 36 0 2687 102 3 3 chr17 71077764 71078128 -18426425 + THE1B LTR MaLR 1 364 0 2021 127 0 29 chr17 71078260 71078576 -18425977 + AluSx SINE Alu 1 307 -5 27 29 0 0 chr17 71078625 71078659 -18425894 + AT_rich Low_complexity Low_complexity 1 34 0 5626 100 20 12 chr17 71078779 71079659 -18424894 + L1MA3 LINE L1 5419 6305 0 749 245 5 0 chr17 71079869 71080057 -18424496 - L1MB7 LINE L1 -13 6171 5983 477 304 62 45 chr17 71080058 71080390 -18424163 + L1MC4a LINE L1 5544 5888 -233 2313 90 0 10 chr17 71080390 71080691 -18423862 + AluSg SINE Alu 1 298 -12 477 304 62 45 chr17 71080691 71080738 -18423815 + L1MC4a LINE L1 5888 5933 -188 21 0 0 0 chr17 71080841 71080862 -18423691 + AT_rich Low_complexity Low_complexity 1 21 0 1740 151 30 10 chr17 71081084 71081389 -18423164 - AluY SINE Alu 0 311 1 272 221 71 65 chr17 71081427 71081581 -18422972 + L1ME4a LINE L1 5960 6114 -7 14905 201 66 28 chr17 71082264 71086737 -18417816 + L1MA8 LINE L1 5 4307 -2944 2183 112 7 3 chr17 71086737 71087032 -18417521 - AluSx SINE Alu -16 296 1 14905 201 66 28 chr17 71087032 71087049 -18417504 + L1MA8 LINE L1 4307 4322 -2929 387 41 0 0 chr17 71087049 71087098 -18417455 + (CA)n Simple_repeat Simple_repeat 2 50 0 14905 201 66 28 chr17 71087098 71087740 -18416813 + L1MA8 LINE L1 4322 4938 -2313 1581 164 7 41 chr17 71087740 71088032 -18416521 + AluSx SINE Alu 1 282 -30 14905 201 66 28 chr17 71088032 71088748 -18415805 + L1MA8 LINE L1 4938 5625 -1626 2168 125 3 0 chr17 71088748 71089051 -18415502 - AluSx SINE Alu -8 304 1 14905 201 66 28 chr17 71089051 71089976 -18414577 + L1MA8 LINE L1 5625 6777 -474 273 57 0 0 chr17 71089976 71090011 -18414542 + (CA)n Simple_repeat Simple_repeat 2 36 0 14905 201 66 28 chr17 71090011 71090482 -18414071 + L1MA8 LINE L1 6777 7229 -22 1262 207 64 27 chr17 71090484 71090779 -18413774 + AluJo SINE Alu 3 308 -4 21 100 0 0 chr17 71091328 71091398 -18413155 + AT_rich Low_complexity Low_complexity 1 70 0 367 305 222 21 chr17 71091838 71092172 -18412381 + L2 LINE L2 2827 3227 -45 309 289 0 13 chr17 71092367 71092443 -18412110 + L2 LINE L2 3235 3309 -4 2403 146 15 0 chr17 71092636 71093033 -18411520 + MER57A LTR ERV1 1 403 0 2289 121 0 0 chr17 71093915 71094228 -18410325 + AluSq SINE Alu 1 313 0 2119 82 62 7 chr17 71094829 71095120 -18409433 + AluY SINE Alu 1 307 -4 31 44 0 0 chr17 71095316 71095361 -18409192 + AT_rich Low_complexity Low_complexity 1 45 0 850 219 52 40 chr17 71095432 71095728 -18408825 - MER2 DNA MER2_type 0 345 1 23 33 0 0 chr17 71095857 71095887 -18408666 + AT_rich Low_complexity Low_complexity 1 30 0 318 275 12 0 chr17 71096873 71096953 -18407600 - L2 LINE L2 -4 3309 3229 322 215 48 113 chr17 71096968 71097154 -18407399 + L1MC/D LINE L1 1736 1909 -4487 * 405 219 122 133 chr17 71097150 71097209 -18407344 + L1MC/D LINE L1 3932 3990 -2225 2368 78 3 10 chr17 71097209 71097517 -18407036 + AluY SINE Alu 1 306 -5 405 219 122 133 chr17 71097517 71097635 -18406918 + L1MC/D LINE L1 3990 4108 -2107 2074 112 24 7 chr17 71097635 71097929 -18406624 + AluSq SINE Alu 1 299 -14 405 219 122 133 chr17 71097929 71098158 -18406395 + L1MC/D LINE L1 4108 4336 -1879 189 107 0 0 chr17 71098158 71098186 -18406367 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 405 219 122 133 chr17 71098186 71098243 -18406310 + L1MC/D LINE L1 4336 4392 -1823 7081 167 24 7 chr17 71098246 71099415 -18405138 + L1MA3 LINE L1 6 1194 -6371 3977 107 32 18 chr17 71099410 71100195 -18404358 + L1MA3 LINE L1 2780 3619 -3946 * 1830 170 3 0 chr17 71100205 71100493 -18404060 + AluJo SINE Alu 1 289 -23 13342 156 19 7 chr17 71100493 71104117 -18400436 + L1MA3 LINE L1 4052 7723 -1 281 0 0 0 chr17 71104132 71104173 -18400380 + L1PA4 LINE L1 6115 6155 0 371 300 83 35 chr17 71104249 71104539 -18400014 + L1MC/D LINE L1 4478 4781 -1434 2334 93 3 0 chr17 71104574 71104875 -18399678 + AluY SINE Alu 3 304 -7 1180 152 0 0 chr17 71104876 71105054 -18399499 + AluSc SINE Alu 132 309 0 532 245 87 66 chr17 71105212 71105388 -18399165 + L1MC/D LINE L1 5011 5182 -1212 5767 88 45 12 chr17 71105388 71106541 -18398012 + L1PA14 LINE L1 4976 6158 -3 532 245 87 66 chr17 71106541 71106702 -18397851 + L1MC/D LINE L1 5182 5338 -1056 2282 101 0 7 chr17 71106702 71107009 -18397544 + AluSq SINE Alu 1 305 -8 532 245 87 66 chr17 71107009 71107279 -18397274 + L1MC/D LINE L1 5338 5649 -745 1970 140 0 7 chr17 71107355 71107640 -18396913 + AluSx SINE Alu 1 283 -29 1094 97 0 13 chr17 71107640 71107795 -18396758 + AluSp/q SINE Alu 161 313 0 264 167 0 0 chr17 71107916 71107964 -18396589 + (TA)n Simple_repeat Simple_repeat 2 49 0 596 264 59 72 chr17 71109350 71109616 -18394937 + L1ME LINE L1 5219 5481 -685 2196 105 20 0 chr17 71109616 71109910 -18394643 + AluSx SINE Alu 1 300 -12 596 264 59 72 chr17 71109910 71110017 -18394536 + L1ME LINE L1 5481 5588 -578 628 193 13 40 chr17 71110021 71110152 -18394401 - MLT1H LTR MaLR -2 547 419 2398 177 62 0 chr17 71110152 71110586 -18393967 + LOR1b LTR ERV1 1 461 0 628 193 13 40 chr17 71110586 71110604 -18393949 - MLT1H LTR MaLR -130 419 402 2121 101 0 88 chr17 71111557 71111885 -18392668 - AluSc SINE Alu -8 301 3 22 56 0 0 chr17 71112160 71112196 -18392357 + AT_rich Low_complexity Low_complexity 1 36 0 4693 173 26 52 chr17 71112255 71113555 -18390998 + L1MA1 LINE L1 5042 6302 0 1931 223 43 54 chr17 71113566 71113606 -18390947 - L1ME1 LINE L1 -180 6797 6758 3106 70 40 9 chr17 71113606 71114050 -18390503 + L1PA10 LINE L1 5711 6168 0 1931 223 43 54 chr17 71114050 71114638 -18389915 - L1ME1 LINE L1 -219 6758 6246 372 160 64 11 chr17 71114644 71114738 -18389815 - L1ME1 LINE L1 -812 6145 6047 1736 250 45 20 chr17 71114751 71114895 -18389658 - L1ME1 LINE L1 -2492 4465 4326 2262 114 0 0 chr17 71114895 71115194 -18389359 - AluSx SINE Alu -13 299 1 1736 250 45 20 chr17 71115194 71115654 -18388899 - L1ME1 LINE L1 -2631 4326 3846 1313 244 44 9 chr17 71115650 71115689 -18388864 - L1ME1 LINE L1 -4831 2024 1988 * 2386 81 10 0 chr17 71115689 71115984 -18388569 + AluSp SINE Alu 1 298 -15 1313 244 44 9 chr17 71115984 71116386 -18388167 - L1ME1 LINE L1 -4867 1988 1621 410 110 0 14 chr17 71116386 71116459 -18388094 - FAM SINE Alu -2 183 112 289 191 0 0 chr17 71116459 71116506 -18388047 - AluYb8 SINE Alu -127 181 135 7281 181 88 26 chr17 71116507 71116580 -18387973 - L1ME1 LINE L1 -5233 1626 1559 2200 114 0 7 chr17 71116580 71116887 -18387666 - AluSc SINE Alu -4 305 1 7281 181 88 26 chr17 71116887 71118343 -18386210 - L1ME1 LINE L1 -5300 1559 3 947 211 59 0 chr17 71118344 71118581 -18385972 - L1M4 LINE L1 -3108 3038 2788 302 309 39 66 chr17 71118638 71118819 -18385734 - L1ME LINE L1 -5517 1013 838 259 267 22 37 chr17 71119417 71119560 -18384993 - L1ME LINE L1 -5919 611 76 23 54 0 0 chr17 71119720 71119757 -18384796 + AT_rich Low_complexity Low_complexity 1 37 0 1001 156 36 12 chr17 71120066 71120233 -18384320 + FRAM SINE Alu 1 170 -6 308 108 27 27 chr17 71120420 71120494 -18384059 + A-rich Low_complexity Low_complexity 4 77 0 21 0 0 0 chr17 71121866 71121887 -18382666 + AT_rich Low_complexity Low_complexity 1 21 0 2287 105 0 6 chr17 71122707 71123021 -18381532 + AluSx SINE Alu 1 312 0 326 248 248 21 chr17 71123322 71123697 -18380856 + L1ME4a LINE L1 5651 6110 -11 28 29 0 0 chr17 71124167 71124202 -18380351 + AT_rich Low_complexity Low_complexity 1 35 0 281 238 39 11 chr17 71124524 71124704 -18379849 + GA-rich Low_complexity Low_complexity 1 185 0 26 30 0 0 chr17 71124909 71124942 -18379611 + AT_rich Low_complexity Low_complexity 1 33 0 2494 60 0 3 chr17 71125184 71125484 -18379069 + AluY SINE Alu 1 299 -12 22 35 0 0 chr17 71125891 71125920 -18378633 + AT_rich Low_complexity Low_complexity 1 29 0 2388 62 0 20 chr17 71126150 71126456 -18378097 + AluY SINE Alu 1 300 -11 2372 96 6 6 chr17 71126577 71126889 -18377664 + AluSx SINE Alu 1 312 0 1131 103 6 6 chr17 71127581 71127765 -18376788 + AluSg/x SINE Alu 133 310 0 294 335 159 45 chr17 71129006 71129247 -18375306 + L2 LINE L2 1762 1974 -1340 1584 167 66 10 chr17 71129247 71129535 -18375018 + AluJb SINE Alu 1 304 -8 294 335 159 45 chr17 71129535 71129854 -18374699 + L2 LINE L2 1974 2386 -928 195 125 0 0 chr17 71130527 71130567 -18373986 + (TA)n Simple_repeat Simple_repeat 1 40 0 656 259 13 19 chr17 71130643 71130801 -18373752 + L1M3d LINE L1 450 606 -5697 715 300 121 44 chr17 71130815 71131367 -18373186 + L1M3d LINE L1 613 1085 -5218 2630 259 95 25 chr17 71131505 71132694 -18371859 + L1M3d LINE L1 811 2052 -4330 3157 123 8 20 chr17 71132694 71133196 -18371357 - LOR1a LTR ERV1 -1 496 1 2630 259 95 25 chr17 71133196 71133531 -18371022 + L1M3d LINE L1 2052 2362 -4020 * 6390 193 32 21 chr17 71133499 71134015 -18370538 + L1M3d LINE L1 3051 3560 -2822 1613 181 13 27 chr17 71134015 71134314 -18370239 + AluJo SINE Alu 3 297 -15 6390 193 32 21 chr17 71134314 71135354 -18369199 + L1M3d LINE L1 3560 4624 -1758 1936 104 18 32 chr17 71135360 71135638 -18368915 - AluSp SINE Alu -39 274 1 488 311 70 47 chr17 71135670 71135969 -18368584 - L1MEd LINE L1 -4937 1268 1021 4992 163 61 3 chr17 71136099 71137808 -18366745 - L1MB1 LINE L1 -1 6167 4372 3154 219 89 32 chr17 71138787 71139102 -18365451 - L1ME1 LINE L1 -2 6164 5869 2089 143 0 0 chr17 71139102 71139403 -18365150 + AluSx SINE Alu 1 301 -11 3154 219 89 32 chr17 71139403 71140483 -18364070 - L1ME1 LINE L1 -297 5869 4681 1629 260 115 21 chr17 71140509 71141171 -18363382 - L1ME1 LINE L1 -2155 3991 3268 8000 199 51 21 chr17 71141193 71142711 -18361842 - L1MB2 LINE L1 -7 6233 4762 2092 138 23 0 chr17 71142711 71143058 -18361495 - THE1A LTR MaLR 0 355 1 8000 199 51 21 chr17 71143058 71144569 -18359984 - L1MB2 LINE L1 -1478 4762 3116 2198 95 0 35 chr17 71144576 71144893 -18359660 - AluSc SINE Alu -3 306 1 1621 139 0 103 chr17 71144893 71145224 -18359329 - AluY SINE Alu -14 297 1 262 216 80 0 chr17 71145226 71145314 -18359239 - L1MB2 LINE L1 -3483 2732 2638 1901 231 39 18 chr17 71145340 71146016 -18358537 - L1MB2 LINE L1 -3457 2758 2112 1542 299 30 35 chr17 71146088 71146659 -18357894 + MLT1E LTR MaLR 1 568 -25 484 319 71 21 chr17 71146876 71147214 -18357339 + MLT1E-int LTR MaLR 248 602 -769 2638 203 55 25 chr17 71147565 71148206 -18356347 + L1ME1 LINE L1 5330 5989 -177 1104 238 44 91 chr17 71148211 71148573 -18355980 + L1ME3 LINE L1 4538 4916 -1230 1996 118 3 49 chr17 71148573 71148877 -18355676 + AluSx SINE Alu 1 290 -22 1104 238 44 91 chr17 71148877 71148924 -18355629 + L1ME3 LINE L1 4916 4964 -1182 2155 136 0 0 chr17 71148924 71149233 -18355320 + AluSx SINE Alu 1 309 -3 1104 238 44 91 chr17 71149233 71149502 -18355051 + L1ME3 LINE L1 4964 5185 -961 1202 220 124 14 chr17 71149504 71149795 -18354758 + MSTD LTR MaLR 1 323 -73 32304 104 12 56 chr17 71149796 71153022 -18351531 + L1PA7 LINE L1 18 2803 -3351 2386 86 0 0 chr17 71153022 71153326 -18351227 + AluY SINE Alu 1 304 -7 32304 104 12 56 chr17 71153326 71156534 -18348019 + L1PA7 LINE L1 2803 6152 -2 508 159 23 0 chr17 71156629 71156717 -18347836 + MSTD LTR MaLR 343 432 0 2120 236 130 26 chr17 71156722 71157598 -18346955 + L1ME3 LINE L1 5190 6156 -6 534 262 56 56 chr17 71157615 71157867 -18346686 + L1ME3A LINE L1 5814 6065 -105 22 56 0 0 chr17 71158377 71158413 -18346140 + AT_rich Low_complexity Low_complexity 1 36 0 25 51 0 0 chr17 71158462 71158501 -18346052 + AT_rich Low_complexity Low_complexity 1 39 0 2204 100 3 0 chr17 71158968 71159267 -18345286 + AluSx SINE Alu 1 300 -12 2067 133 3 0 chr17 71159268 71159554 -18344999 + AluSg1 SINE Alu 1 287 -22 279 0 0 0 chr17 71159554 71159578 -18344975 + (TG)n Simple_repeat Simple_repeat 1 55 0 279 0 0 0 chr17 71159578 71159609 -18344944 + (TG)n Simple_repeat Simple_repeat 2 32 0 943 160 117 5 chr17 71159910 71160098 -18344455 - MER3 DNA MER1_type 0 209 1 24 0 0 0 chr17 71160767 71160791 -18343762 + AT_rich Low_complexity Low_complexity 1 24 0 2392 72 0 19 chr17 71161303 71161610 -18342943 + AluSx SINE Alu 1 301 -11 494 309 22 0 chr17 71162112 71162248 -18342305 - MIR SINE MIR -89 173 35 297 327 128 33 chr17 71162389 71162600 -18341953 + MIR SINE MIR 20 250 -12 24 85 0 0 chr17 71162676 71162735 -18341818 + AT_rich Low_complexity Low_complexity 1 59 0 309 322 0 0 chr17 71163084 71163174 -18341379 + L1MC4 LINE L1 6614 6703 -1339 305 333 0 0 chr17 71163158 71163248 -18341305 - L1MC4 LINE L1 -1339 6703 6614 * 736 238 30 10 chr17 71163550 71163752 -18340801 + MER74B LTR ERVL 417 622 0 2339 101 0 7 chr17 71163963 71164271 -18340282 - AluSg SINE Alu -4 306 1 1172 234 16 0 chr17 71164474 71164730 -18339823 - MLT1E LTR MaLR 0 593 334 832 201 28 17 chr17 71164765 71164944 -18339609 - MLT1E LTR MaLR -393 200 20 2269 127 7 0 chr17 71165170 71165477 -18339076 + AluSx SINE Alu 1 309 -3 333 360 65 65 chr17 71166836 71167114 -18337439 - L2 LINE L2 -13 3259 2982 477 261 0 0 chr17 71167619 71167730 -18336823 - FLAM_A SINE Alu -16 126 16 525 279 96 36 chr17 71167745 71168129 -18336424 - Charlie8 DNA MER1_type -1980 437 31 2455 78 7 0 chr17 71168606 71168915 -18335638 - AluY SINE Alu 0 311 1 195 333 108 29 chr17 71170358 71170460 -18334093 + MIR SINE MIR 37 146 -62 21 0 0 0 chr17 71171732 71171753 -18332800 + AT_rich Low_complexity Low_complexity 1 21 0 971 230 47 0 chr17 71171803 71172016 -18332537 - MER58A DNA MER1_type -1 223 1 9344 126 17 48 chr17 71172120 71175033 -18329520 - L1MA3 LINE L1 0 6305 3493 24 77 0 0 chr17 71175603 71175655 -18328898 + AT_rich Low_complexity Low_complexity 1 52 0 2243 88 0 33 chr17 71176036 71176342 -18328211 - AluY SINE Alu -15 296 1 1853 176 3 12 chr17 71176758 71177099 -18327454 + MER44D DNA MER2_type 1 608 -1 3014 207 91 13 chr17 71178006 71178654 -18325899 + L1ME1 LINE L1 4425 5021 -1145 1729 175 3 36 chr17 71178654 71178962 -18325591 + AluJb SINE Alu 1 298 -14 3014 207 91 13 chr17 71178962 71179911 -18324642 + L1ME1 LINE L1 5021 6149 -17 2225 100 0 7 chr17 71179918 71180208 -18324345 - AluSg SINE Alu -22 288 1 202 359 51 8 chr17 71180591 71180708 -18323845 + L2 LINE L2 314 435 -2879 198 0 0 0 chr17 71180712 71180734 -18323819 + (TC)n Simple_repeat Simple_repeat 1 22 0 2092 98 39 23 chr17 71180970 71181276 -18323277 - AluY SINE Alu 0 311 1 363 319 52 29 chr17 71181764 71181974 -18322579 + L2 LINE L2 2531 2745 -569 1006 324 105 37 chr17 71182004 71182958 -18321595 + L2 LINE L2 1797 2837 -477 431 18 18 0 chr17 71182958 71183014 -18321539 + (CA)n Simple_repeat Simple_repeat 1 57 0 1006 324 105 37 chr17 71183014 71183152 -18321401 + L2 LINE L2 2837 2964 -350 180 298 119 36 chr17 71183314 71183398 -18321155 + L2 LINE L2 3143 3233 -39 2187 103 3 10 chr17 71183906 71184206 -18320347 + AluSx SINE Alu 1 298 -14 2039 149 0 3 chr17 71184436 71184725 -18319828 + AluJb SINE Alu 1 288 -24 2077 90 72 10 chr17 71184738 71185028 -18319525 + AluSq SINE Alu 4 311 -2 509 116 21 63 chr17 71185216 71185311 -18319242 + AluSg/x SINE Alu 200 290 -19 231 143 121 110 chr17 71185828 71185919 -18318634 - MIR SINE MIR -64 144 53 310 317 158 47 chr17 71186722 71187063 -18317490 + L1M2 LINE L1 528 906 -5943 2218 91 20 0 chr17 71187567 71187863 -18316690 + AluY SINE Alu 1 302 -9 1231 145 113 0 chr17 71187882 71188130 -18316423 + L1MA8 LINE L1 5996 6271 -20 21 71 0 0 chr17 71188392 71188434 -18316119 + AT_rich Low_complexity Low_complexity 1 42 0 2288 108 3 0 chr17 71188660 71188956 -18315597 + AluSg SINE Alu 1 297 -13 962 133 0 0 chr17 71189125 71189260 -18315293 - FRAM SINE Alu -10 166 32 2379 54 3 17 chr17 71189418 71189713 -18314840 + AluY SINE Alu 1 291 -20 216 0 0 0 chr17 71189713 71189737 -18314816 + (TA)n Simple_repeat Simple_repeat 2 25 0 408 326 108 36 chr17 71189974 71190107 -18314446 + L2 LINE L2 3015 3137 -176 2184 113 0 3 chr17 71190107 71190418 -18314135 - AluSx SINE Alu 0 310 1 408 326 108 36 chr17 71190418 71190562 -18313991 + L2 LINE L2 3137 3313 0 2296 94 0 3 chr17 71191017 71191314 -18313239 + AluSg SINE Alu 1 296 -14 225 132 0 0 chr17 71191834 71191872 -18312681 + (TA)n Simple_repeat Simple_repeat 1 38 0 2349 78 24 3 chr17 71191872 71192168 -18312385 - AluSp SINE Alu -11 302 1 218 374 0 17 chr17 71193253 71193368 -18311185 + GA-rich Low_complexity Low_complexity 6 118 0 1995 123 7 7 chr17 71193392 71193684 -18310869 + AluSp SINE Alu 17 308 -5 339 293 73 20 chr17 71193698 71193848 -18310705 - L1ME4a LINE L1 -4 6117 5960 391 297 178 16 chr17 71193849 71194287 -18310266 - L1ME4a LINE L1 -298 5823 5315 776 153 0 0 chr17 71194654 71194772 -18309781 + FLAM_C SINE Alu 1 118 -25 21 36 0 0 chr17 71194772 71194800 -18309753 + AT_rich Low_complexity Low_complexity 1 28 0 338 284 165 57 chr17 71195256 71195432 -18309121 + MIR SINE MIR 52 246 -16 335 206 23 8 chr17 71195548 71195679 -18308874 + (CA)n Simple_repeat Simple_repeat 2 134 0 224 217 0 0 chr17 71195705 71195751 -18308802 + (CA)n Simple_repeat Simple_repeat 1 46 0 207 189 0 0 chr17 71195758 71195795 -18308758 + T-rich Low_complexity Low_complexity 2 38 0 2614 40 0 0 chr17 71196255 71196554 -18307999 + AluY SINE Alu 1 299 -12 491 229 67 99 chr17 71197184 71197302 -18307251 + L1MC4 LINE L1 6674 6783 -1259 2312 81 3 39 chr17 71197302 71197611 -18306942 - AluY SINE Alu -13 298 1 491 229 67 99 chr17 71197611 71197715 -18306838 + L1MC4 LINE L1 6783 6889 -1153 1219 104 0 0 chr17 71197725 71197888 -18306665 + AluSc SINE Alu 140 302 -7 11568 165 46 7 chr17 71197890 71200037 -18304516 + L1M1 LINE L1 19 2250 -5315 2369 78 3 0 chr17 71200085 71200378 -18304175 + AluSp SINE Alu 1 294 -19 2483 206 64 45 chr17 71200392 71201040 -18303513 + L1MC4 LINE L1 6897 7562 -480 1546 146 92 15 chr17 71201040 71201301 -18303252 + AluSx SINE Alu 5 285 -27 2483 206 64 45 chr17 71201301 71201370 -18303183 + L1MC4 LINE L1 7562 7628 -414 285 336 9 0 chr17 71201442 71201558 -18302995 + ERVL LTR ERVL 3393 3509 -2255 1876 318 96 29 chr17 71201646 71203014 -18301539 + ERVL LTR ERVL 3623 5082 -682 573 212 15 30 chr17 71203452 71203584 -18300969 + MLT1E LTR MaLR 313 442 -151 3109 135 36 3 chr17 71203591 71204175 -18300378 - L1 LINE L1 -1282 4864 4262 21 36 0 0 chr17 71204175 71204203 -18300350 + AT_rich Low_complexity Low_complexity 1 28 0 548 29 14 0 chr17 71204529 71204599 -18299954 + (CA)n Simple_repeat Simple_repeat 2 72 0 2142 116 3 3 chr17 71204653 71204956 -18299597 - AluSq SINE Alu -10 303 1 2288 280 73 15 chr17 71205211 71205946 -18298607 - L2 LINE L2 -1534 1780 1003 273 298 8 18 chr17 71206028 71206115 -18298438 - MER5A DNA MER1_type 0 189 91 2133 113 0 0 chr17 71206240 71206564 -18297989 - AluSx SINE Alu 0 324 1 2336 105 20 0 chr17 71207060 71207366 -18297187 - AluSx SINE Alu 0 312 1 1724 194 10 0 chr17 71208344 71208637 -18295916 + AluJb SINE Alu 1 296 -16 2218 100 7 0 chr17 71208746 71209046 -18295507 - AluSq SINE Alu -11 302 1 929 244 47 69 chr17 71209665 71209984 -18294569 + LTR16A1 LTR ERVL 19 330 -127 803 198 0 6 chr17 71209984 71210141 -18294412 + MER5A DNA MER1_type 30 185 -4 416 152 98 54 chr17 71210143 71210255 -18294298 + LTR16A1 LTR ERVL 339 455 -2 627 191 0 0 chr17 71210766 71210871 -18293682 + AluSc SINE Alu 192 296 -13 2047 86 0 4 chr17 71210930 71211186 -18293367 + AluSx SINE Alu 43 297 -15 243 286 36 0 chr17 71212273 71212329 -18292224 + MIR SINE MIR 14 71 -191 1811 242 72 76 chr17 71212329 71212356 -18292197 + L1MC4 LINE L1 7028 7054 -988 1813 169 21 0 chr17 71212356 71212646 -18291907 + AluSg SINE Alu 1 296 -14 1811 242 72 76 chr17 71212646 71213003 -18291550 + L1MC4 LINE L1 7054 7411 -631 2068 89 4 0 chr17 71213003 71213261 -18291292 - AluSg SINE Alu -18 292 34 1811 242 72 76 chr17 71213261 71213428 -18291125 + L1MC4 LINE L1 7411 7577 -465 1972 139 0 0 chr17 71213428 71213701 -18290852 + AluSx SINE Alu 14 286 -26 1811 242 72 76 chr17 71213701 71214096 -18290457 + L1MC4 LINE L1 7577 7972 -70 204 294 35 12 chr17 71214112 71214197 -18290356 + MIR SINE MIR 157 243 -19 1797 161 38 0 chr17 71214324 71214615 -18289938 + AluSx SINE Alu 1 302 -10 188 282 26 13 chr17 71214954 71215032 -18289521 + L2 LINE L2 2997 3075 -197 365 185 0 0 chr17 71215080 71215145 -18289408 + L2 LINE L2 3245 3309 -4 2152 134 7 0 chr17 71215599 71215926 -18288627 + AluSx SINE Alu 2 330 0 918 128 17 6 chr17 71215947 71216119 -18288434 + GA-rich Low_complexity Low_complexity 4 177 0 458 248 149 31 chr17 71216566 71216727 -18287826 + MER5A DNA MER1_type 9 188 -1 1541 200 17 7 chr17 71216792 71217082 -18287471 + AluJo SINE Alu 1 293 -19 2359 96 3 0 chr17 71217255 71217558 -18286995 - AluSp SINE Alu -9 304 1 226 365 67 0 chr17 71217863 71217967 -18286586 + L2 LINE L2 3203 3313 0 420 243 87 0 chr17 71218268 71218371 -18286182 + MER81 DNA DNA 2 113 -1 1524 163 55 39 chr17 71218881 71219290 -18285263 + AluJb SINE Alu 1 414 0 1170 117 0 0 chr17 71219290 71219469 -18285084 + (GGAAA)n Simple_repeat Simple_repeat 2 180 0 2154 107 31 0 chr17 71219484 71219775 -18284778 + AluSg SINE Alu 11 310 0 1875 55 0 0 chr17 71220360 71220578 -18283975 + AluY SINE Alu 78 295 -16 363 288 96 36 chr17 71220918 71221043 -18283510 + L1ME2 LINE L1 5605 5721 -400 1954 106 60 0 chr17 71221043 71221325 -18283228 + AluSx SINE Alu 1 299 -13 363 288 96 36 chr17 71221325 71221480 -18283073 + L1ME2 LINE L1 5721 5902 -219 2204 115 20 3 chr17 71221566 71221871 -18282682 - AluSx SINE Alu -2 310 1 417 283 0 0 chr17 71223003 71223123 -18281430 - MIR SINE MIR -48 214 95 2501 60 3 0 chr17 71223207 71223505 -18281048 + AluY SINE Alu 1 299 -12 1834 101 0 0 chr17 71223539 71223776 -18280777 - AluSq SINE Alu -32 281 45 1156 103 0 0 chr17 71223779 71223924 -18280629 - AluSq/x SINE Alu -168 145 1 1516 180 13 22 chr17 71224927 71225321 -18279232 + MER89 LTR ERV1 10 557 -2 386 241 69 35 chr17 71225795 71225940 -18278613 + L1ME2 LINE L1 6013 6162 -2 872 182 6 0 chr17 71225957 71226133 -18278420 + CT-rich Low_complexity Low_complexity 2 178 0 4104 216 43 49 chr17 71226248 71226564 -18277989 + L1MC4 LINE L1 6460 6776 -1266 1691 169 17 14 chr17 71226564 71226859 -18277694 + AluSx SINE Alu 1 296 -16 4104 216 43 49 chr17 71226859 71227035 -18277518 + L1MC4 LINE L1 6776 6952 -1090 2413 91 13 0 chr17 71227035 71227343 -18277210 + AluSx SINE Alu 1 312 0 4104 216 43 49 chr17 71227343 71227997 -18276556 + L1MC4 LINE L1 6952 7600 -442 326 191 11 79 chr17 71228070 71228159 -18276394 + L1MC4 LINE L1 7954 8036 -6 489 175 32 8 chr17 71228173 71228299 -18276254 + GA-rich Low_complexity Low_complexity 3 131 0 1069 146 0 0 chr17 71228728 71228879 -18275674 - AluSq/x SINE Alu -162 151 1 2446 37 41 14 chr17 71228915 71229210 -18275343 + AluY SINE Alu 1 303 -8 2229 101 3 3 chr17 71229663 71229950 -18274603 + AluSq SINE Alu 1 287 -26 320 62 62 0 chr17 71229950 71230014 -18274539 + (TA)n Simple_repeat Simple_repeat 1 68 0 2635 43 3 0 chr17 71230692 71230995 -18273558 - AluY SINE Alu -7 304 1 463 155 24 0 chr17 71231237 71231321 -18273232 - AluJb SINE Alu -6 306 221 415 159 0 14 chr17 71231318 71231387 -18273166 - AluJb SINE Alu -159 153 86 * 1270 154 0 40 chr17 71231387 71231614 -18272939 - AluJo SINE Alu -92 220 3 25 0 0 0 chr17 71231620 71231645 -18272908 + AT_rich Low_complexity Low_complexity 1 25 0 2087 122 11 0 chr17 71231997 71232320 -18272233 - AluSx SINE Alu 0 326 1 584 155 10 0 chr17 71232321 71232418 -18272135 - MER41-int LTR ERV1 -4257 1689 1592 1101 118 0 7 chr17 71232418 71232570 -18271983 - AluSq/x SINE Alu -162 151 1 425 249 62 52 chr17 71233188 71233338 -18271215 + MIR SINE MIR 6 161 -101 2107 124 0 3 chr17 71233338 71233648 -18270905 + AluSc SINE Alu 1 309 0 425 249 62 52 chr17 71233648 71233689 -18270864 + MIR SINE MIR 161 200 -62 303 276 121 39 chr17 71233699 71233931 -18270622 + L1ME4a LINE L1 5698 5948 -173 2119 139 0 0 chr17 71234458 71234759 -18269794 + AluSx SINE Alu 1 301 -11 2167 121 0 13 chr17 71235066 71235373 -18269180 + AluSx SINE Alu 1 303 -9 333 270 101 42 chr17 71235662 71235899 -18268654 - L1ME4a LINE L1 -180 5941 5691 470 104 0 0 chr17 71235907 71235974 -18268579 - MER41B LTR ERV1 -88 547 481 1867 140 7 27 chr17 71235990 71236290 -18268263 - AluSx SINE Alu -18 294 1 556 208 25 0 chr17 71236312 71236432 -18268121 - L1ME4a LINE L1 -458 5663 5541 1858 153 122 10 chr17 71236522 71236907 -18267646 + MSTA LTR MaLR 1 428 0 222 118 0 0 chr17 71236917 71236951 -18267602 + (A)n Simple_repeat Simple_repeat 1 34 0 1854 160 3 7 chr17 71237200 71237493 -18267060 + AluJb SINE Alu 1 292 -20 363 123 0 15 chr17 71237528 71237586 -18266967 + L1PA10 LINE L1 6102 6160 -8 2259 92 3 7 chr17 71237586 71237879 -18266674 - AluSc SINE Alu -17 292 1 241 232 210 7 chr17 71237899 71238037 -18266516 + L1ME4a LINE L1 5956 6121 0 473 373 29 42 chr17 71238078 71238464 -18266089 + L3 LINE CR1 191 571 -1006 2407 90 0 3 chr17 71238633 71238933 -18265620 - AluSg SINE Alu -11 299 1 1540 193 39 0 chr17 71238966 71239123 -18265430 - AluJb SINE Alu -21 291 117 192 40 0 0 chr17 71239123 71239148 -18265405 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1540 193 39 0 chr17 71239148 71239270 -18265283 - AluJb SINE Alu -195 117 1 462 156 89 0 chr17 71239370 71239460 -18265093 + MER4A LTR ERV1 1 98 -566 1770 135 35 22 chr17 71239460 71239801 -18264752 + MER4A LTR ERV1 261 664 0 2315 114 0 0 chr17 71240122 71240429 -18264124 + AluSx SINE Alu 1 307 -5 1994 144 10 3 chr17 71240448 71240739 -18263814 + AluSx SINE Alu 1 293 -19 478 314 199 40 chr17 71240744 71240814 -18263739 + L3 LINE CR1 609 667 -910 2307 105 0 0 chr17 71240814 71241110 -18263443 + AluSg1 SINE Alu 1 296 -13 478 314 199 40 chr17 71241110 71241691 -18262862 + L3 LINE CR1 667 1388 -189 2072 135 3 16 chr17 71241691 71242002 -18262551 - AluJb SINE Alu -5 307 1 478 314 199 40 chr17 71242002 71242071 -18262482 + L3 LINE CR1 1388 1445 -132 296 241 44 80 chr17 71242108 71242187 -18262366 + L2 LINE L2 2689 2762 -552 2442 85 0 10 chr17 71242187 71242493 -18262060 + AluY SINE Alu 1 303 -8 296 241 44 80 chr17 71242493 71242550 -18262003 + L2 LINE L2 2762 2820 -494 345 243 54 34 chr17 71242638 71242786 -18261767 - L2 LINE L2 -58 3255 3105 1081 102 0 38 chr17 71242786 71242943 -18261610 + AluJb SINE Alu 1 151 -161 799 206 26 0 chr17 71242944 71243099 -18261454 + LTR32 LTR ERVL 313 471 0 294 221 105 12 chr17 71243116 71243202 -18261351 + L2 LINE L2 3218 3311 -2 1062 186 14 42 chr17 71243314 71243529 -18261024 + AluJo SINE Alu 86 294 -18 2220 106 0 34 chr17 71243529 71243849 -18260704 + AluSg SINE Alu 1 309 -1 2331 95 13 0 chr17 71243993 71244299 -18260254 - AluSg SINE Alu 0 310 1 1037 93 7 7 chr17 71244307 71244446 -18260107 - AluSx SINE Alu -17 295 157 439 149 0 0 chr17 71244446 71244513 -18260040 - AluSx SINE Alu -245 68 2 2050 168 151 62 chr17 71244647 71244892 -18259661 + MER34C LTR ERV1 1 223 -362 2248 107 0 10 chr17 71244892 71245202 -18259351 + AluSx SINE Alu 1 307 -5 2050 168 151 62 chr17 71245202 71245493 -18259060 + MER34C LTR ERV1 223 585 0 2156 114 7 7 chr17 71245804 71246101 -18258452 + AluSx SINE Alu 1 297 -15 1197 208 10 35 chr17 71246254 71246534 -18258019 + MER101 LTR ERV1 224 470 -4 2078 129 0 0 chr17 71246659 71246939 -18257614 + AluSq SINE Alu 1 280 -33 2211 129 0 6 chr17 71247087 71247398 -18257155 + AluSq SINE Alu 1 309 -4 2532 50 3 3 chr17 71247498 71247795 -18256758 - AluY SINE Alu -14 297 1 2618 107 124 79 chr17 71247818 71248129 -18256424 - MER4B LTR ERV1 -1 609 313 2223 119 0 3 chr17 71248129 71248432 -18256121 + AluSx SINE Alu 1 302 -10 2618 107 124 79 chr17 71248432 71248699 -18255854 - MER4B LTR ERV1 -297 313 5 1868 158 10 7 chr17 71248771 71249069 -18255484 - AluSx SINE Alu -9 303 5 2130 118 0 0 chr17 71249122 71249431 -18255122 + AluSx SINE Alu 2 310 0 351 0 0 0 chr17 71249453 71249492 -18255061 + (TG)n Simple_repeat Simple_repeat 2 40 0 828 268 20 37 chr17 71249492 71249783 -18254770 - L1MC4a LINE L1 -1947 5861 5574 2175 131 0 10 chr17 71250933 71251245 -18253308 + AluSx SINE Alu 1 309 -3 428 308 28 7 chr17 71251286 71251429 -18253124 - MIR SINE MIR -82 180 35 598 162 13 218 chr17 71251437 71251574 -18252979 + MER5A DNA MER1_type 4 167 -22 423 0 0 0 chr17 71251574 71251621 -18252932 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 598 162 13 218 chr17 71251621 71251650 -18252903 + MER5A DNA MER1_type 167 112 -77 2380 74 0 0 chr17 71251650 71251935 -18252618 - AluSc SINE Alu -24 285 1 598 162 13 218 chr17 71251935 71252001 -18252552 + MER5A DNA MER1_type 111 189 0 274 242 31 94 chr17 71252087 71252168 -18252385 - MIR SINE MIR -35 227 154 1767 151 18 7 chr17 71252168 71252478 -18252075 - AluSx SINE Alu 0 313 1 274 242 31 94 chr17 71252478 71252523 -18252030 - MIR SINE MIR -108 154 108 1219 172 54 118 chr17 71253235 71253277 -18251276 + MLT1A1 LTR MaLR 1 44 -321 2211 117 0 0 chr17 71253277 71253576 -18250977 + AluSx SINE Alu 1 299 -13 2116 106 31 7 chr17 71253582 71253875 -18250678 + AluSx SINE Alu 1 300 -12 1219 172 54 118 chr17 71253875 71254215 -18250338 + MLT1A1 LTR MaLR 49 365 0 2087 127 0 7 chr17 71254249 71254549 -18250004 - AluSx SINE Alu -14 298 1 270 0 0 0 chr17 71255026 71255056 -18249497 + (A)n Simple_repeat Simple_repeat 1 30 0 1581 208 3 3 chr17 71255630 71255928 -18248625 - AluJo SINE Alu -14 298 1 2267 113 0 0 chr17 71255938 71256239 -18248314 - AluSx SINE Alu -11 301 1 851 263 44 0 chr17 71256265 71256470 -18248083 - MIR SINE MIR -21 241 28 268 191 58 196 chr17 71256487 71256572 -18247981 + MER5A DNA MER1_type 12 107 -82 2303 111 0 0 chr17 71256572 71256870 -18247683 + AluY SINE Alu 1 298 -13 268 191 58 196 chr17 71256870 71256921 -18247632 + MER5A DNA MER1_type 107 122 -67 1881 155 7 0 chr17 71256921 71257230 -18247323 - AluSx SINE Alu -1 311 1 268 191 58 196 chr17 71257230 71257265 -18247288 + MER5A DNA MER1_type 122 160 -29 2238 97 0 3 chr17 71257914 71258223 -18246330 - AluSc SINE Alu -1 308 1 1966 121 0 24 chr17 71258266 71258720 -18245833 + AluSx SINE Alu 1 312 0 632 309 25 21 chr17 71258781 71259020 -18245533 - L3 LINE CR1 -87 1490 1251 290 244 132 39 chr17 71259020 71259088 -18245465 + MIR SINE MIR 3 63 -194 1677 165 46 23 chr17 71259088 71259338 -18245215 + L1MB4 LINE L1 5828 6090 -90 2269 126 8 35 chr17 71259338 71259712 -18244841 + THE1B LTR MaLR 1 364 0 1677 165 46 23 chr17 71259712 71259806 -18244747 + L1MB4 LINE L1 6090 6180 0 290 244 132 39 chr17 71259806 71259931 -18244622 + MIR SINE MIR 63 194 -63 299 351 69 46 chr17 71260258 71260432 -18244121 - MER5B DNA MER1_type 0 178 1 1859 202 105 33 chr17 71260597 71260659 -18243894 - MLT2B1 LTR ERVL 0 520 464 378 63 127 114 chr17 71260659 71260712 -18243841 + MADE1 DNA Mariner 1 57 -23 1893 135 24 10 chr17 71260712 71261009 -18243544 - AluSx SINE Alu -11 301 1 378 63 127 114 chr17 71261009 71261034 -18243519 + MADE1 DNA Mariner 57 80 0 1859 202 105 33 chr17 71261034 71261456 -18243097 - MLT2B1 LTR ERVL -56 464 1 867 168 0 0 chr17 71261565 71261714 -18242839 + L1PA16 LINE L1 6018 6166 0 377 51 34 0 chr17 71261738 71261797 -18242756 + (CAAA)n Simple_repeat Simple_repeat 4 64 0 2040 106 17 3 chr17 71261801 71262102 -18242451 + AluSx SINE Alu 1 305 -7 613 124 11 0 chr17 71262430 71262519 -18242034 + 5S rRNA rRNA 1 90 -31 478 248 16 8 chr17 71263363 71263492 -18241061 - LTR67 LTR ERVL 0 557 428 6813 63 14 28 chr17 71263626 71264683 -18239870 + SVA Other Other 432 1386 0 1227 159 9 31 chr17 71264692 71264919 -18239634 - L1MB3 LINE L1 -43 6140 5919 1992 131 31 9 chr17 71265091 71265411 -18239142 - L1MB3 LINE L1 -247 5936 5610 203 0 37 0 chr17 71265697 71265724 -18238829 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2792 155 15 34 chr17 71265730 71266061 -18238492 - L1MB8 LINE L1 -27 6151 5832 1794 131 17 24 chr17 71266061 71266359 -18238194 + AluSx SINE Alu 12 307 -5 2792 155 15 34 chr17 71266359 71266564 -18237989 - L1MB8 LINE L1 -346 5832 5625 483 293 39 35 chr17 71266582 71266814 -18237739 + LTR16C LTR ERVL 259 491 0 2159 115 0 6 chr17 71266823 71267137 -18237416 + AluSx SINE Alu 1 312 0 210 298 64 21 chr17 71267417 71267511 -18237042 - MIR SINE MIR -144 118 21 261 83 0 0 chr17 71267860 71267896 -18236657 + (T)n Simple_repeat Simple_repeat 1 36 0 1540 210 0 0 chr17 71268309 71268619 -18235934 + AluJo SINE Alu 1 310 -2 1293 174 34 62 chr17 71268627 71268948 -18235605 + AluJo SINE Alu 1 312 0 2405 67 0 0 chr17 71269075 71269373 -18235180 - AluY SINE Alu -13 298 1 851 195 0 24 chr17 71269419 71269583 -18234970 - AluJo SINE Alu -87 225 66 1708 158 31 0 chr17 71269583 71269874 -18234679 + AluJb SINE Alu 3 302 -10 1804 130 3 43 chr17 71269876 71270219 -18234334 + AluSx SINE Alu 1 331 0 275 248 31 93 chr17 71270223 71270352 -18234201 - MIR SINE MIR -58 204 84 272 235 185 8 chr17 71271257 71271376 -18233177 - MLT1J LTR MaLR -364 147 8 208 355 90 37 chr17 71271445 71271615 -18232938 - L2 LINE L2 -1377 1937 1755 2318 97 0 0 chr17 71271615 71271926 -18232627 + AluY SINE Alu 1 311 0 208 355 90 37 chr17 71271926 71271944 -18232609 - L2 LINE L2 -1559 1755 1739 1633 150 3 35 chr17 71272219 71272505 -18232048 + AluJo SINE Alu 1 277 -35 930 131 131 0 chr17 71272520 71272688 -18231865 - MER41E LTR ERV1 -112 400 211 1792 149 3 3 chr17 71272947 71273236 -18231317 - AluSc SINE Alu -20 289 1 629 277 13 50 chr17 71273241 71273479 -18231074 - MER66-int LTR ERV1 -4761 3638 3410 2018 100 43 0 chr17 71273484 71273765 -18230788 + AluSx SINE Alu 1 293 -19 337 306 26 52 chr17 71273777 71274006 -18230547 - MER66-int LTR ERV1 -5203 3716 3494 2424 48 3 10 chr17 71274034 71274344 -18230209 + AluY SINE Alu 1 308 -3 1777 132 9 66 chr17 71274734 71275053 -18229500 + AluJb SINE Alu 2 302 -10 2086 74 32 3 chr17 71275105 71275390 -18229163 - AluSg SINE Alu -17 293 1 257 174 22 0 chr17 71275392 71275438 -18229115 - MER66-int LTR ERV1 -4986 2770 2724 852 264 35 102 chr17 71275531 71276091 -18228462 - MER66-int LTR ERV1 -2812 2717 2112 1769 186 0 0 chr17 71276091 71276403 -18228150 - AluJo SINE Alu 0 312 1 852 264 35 102 chr17 71276403 71276497 -18228056 - MER66-int LTR ERV1 -3417 2112 2013 2171 125 0 0 chr17 71277003 71277315 -18227238 - AluSx SINE Alu 0 312 1 507 241 32 37 chr17 71277437 71277624 -18226929 - MER66-int LTR ERV1 -2774 1511 1326 1273 132 0 5 chr17 71277777 71277966 -18226587 - MER41E LTR ERV1 0 512 325 687 290 48 26 chr17 71278097 71278328 -18226225 - MIR SINE MIR -6 256 21 1806 131 0 4 chr17 71278402 71278669 -18225884 - AluSq SINE Alu -47 266 1 2251 98 3 0 chr17 71279065 71279372 -18225181 + AluSp SINE Alu 1 308 -5 1612 174 30 7 chr17 71279381 71279685 -18224868 + AluJb SINE Alu 1 311 -1 390 21 0 0 chr17 71279767 71279814 -18224739 + (TC)n Simple_repeat Simple_repeat 2 48 0 2308 99 0 0 chr17 71280267 71280569 -18223984 + AluSq SINE Alu 1 302 -11 2284 75 3 0 chr17 71280823 71281117 -18223436 - AluSc SINE Alu -14 295 1 1410 171 47 53 chr17 71282089 71282223 -18222330 + AluJo SINE Alu 1 134 -178 2075 115 3 0 chr17 71282223 71282519 -18222034 + AluSx SINE Alu 1 297 -15 1410 171 47 53 chr17 71282519 71282683 -18221870 + AluJo SINE Alu 134 297 -15 1988 141 0 0 chr17 71283049 71283347 -18221206 + AluSx SINE Alu 1 298 -14 2075 95 25 0 chr17 71283349 71283679 -18220874 + AluSq SINE Alu 1 337 0 1762 189 25 30 chr17 71283739 71284036 -18220517 + MLT1A1 LTR MaLR 1 297 -68 2150 120 0 0 chr17 71284036 71284344 -18220209 - AluSg SINE Alu -2 308 1 1762 189 25 30 chr17 71284344 71284411 -18220142 + MLT1A1 LTR MaLR 297 363 -2 1466 118 5 0 chr17 71284569 71284773 -18219780 - AluSx SINE Alu -106 206 2 288 0 0 0 chr17 71284773 71284805 -18219748 + (A)n Simple_repeat Simple_repeat 1 32 0 362 227 154 27 chr17 71284906 71285016 -18219537 + L2 LINE L2 3190 3313 0 229 252 117 18 chr17 71285272 71285383 -18219170 + LTR48 LTR ERV1 526 647 -140 1263 96 0 0 chr17 71285383 71285549 -18219004 - AluSp SINE Alu -12 301 136 297 0 0 0 chr17 71285574 71285607 -18218946 + (CA)n Simple_repeat Simple_repeat 2 34 0 951 116 0 0 chr17 71285975 71286104 -18218449 + FLAM_C SINE Alu 1 129 -4 1877 163 0 0 chr17 71286137 71286438 -18218115 + AluSx SINE Alu 1 301 -11 2089 93 7 0 chr17 71286762 71287052 -18217501 - AluSq SINE Alu -21 292 1 213 39 0 0 chr17 71287055 71287081 -18217472 + (T)n Simple_repeat Simple_repeat 1 26 0 304 242 0 0 chr17 71287116 71287182 -18217371 + MER34 LTR ERV1 31 96 -446 242 252 114 23 chr17 71287359 71287490 -18217063 + LTR48 LTR ERV1 505 647 -140 1255 97 0 0 chr17 71287490 71287655 -18216898 - AluSp SINE Alu -13 300 136 279 0 0 0 chr17 71287680 71287711 -18216842 + (CA)n Simple_repeat Simple_repeat 2 32 0 385 295 203 0 chr17 71287888 71288095 -18216458 + L2 LINE L2 1637 1885 -1429 230 319 124 26 chr17 71288073 71288096 -18216457 + L2 LINE L2 3141 3160 -112 * 627 241 8 8 chr17 71288096 71288229 -18216324 + FLAM_A SINE Alu 1 133 0 230 319 124 26 chr17 71288229 71288318 -18216235 + L2 LINE L2 3160 3264 -8 236 194 60 15 chr17 71288686 71288753 -18215800 - MER34 LTR ERV1 -48 494 425 2068 91 3 7 chr17 71288821 71289106 -18215447 - AluSg1 SINE Alu -25 284 1 261 0 0 0 chr17 71289160 71289189 -18215364 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1826 136 11 4 chr17 71289191 71289470 -18215083 - AluSx SINE Alu -31 281 1 2396 70 0 0 chr17 71289497 71289796 -18214757 + AluSx SINE Alu 1 299 -13 897 123 0 7 chr17 71290292 71290430 -18214123 - AluSq/x SINE Alu -175 137 1 1873 94 8 4 chr17 71290639 71290904 -18213649 - AluY SINE Alu -7 304 39 202 267 93 13 chr17 71290977 71291052 -18213501 + L2 LINE L2 3158 3238 -34 560 193 97 21 chr17 71291253 71291398 -18213155 - L1MA10 LINE L1 -12 6322 6167 231 250 20 70 chr17 71291388 71291488 -18213065 + L1MC5 LINE L1 7761 7855 -106 * 207 100 0 0 chr17 71291555 71291585 -18212968 + (T)n Simple_repeat Simple_repeat 1 30 0 2402 73 0 0 chr17 71291598 71291901 -18212652 + AluY SINE Alu 1 303 -8 2041 123 3 3 chr17 71292104 71292405 -18212148 - AluSx SINE Alu -10 302 2 1606 181 7 13 chr17 71292461 71292760 -18211793 - AluJo SINE Alu -15 297 1 25 51 0 0 chr17 71292763 71292802 -18211751 + AT_rich Low_complexity Low_complexity 1 39 0 841 268 67 103 chr17 71292813 71293455 -18211098 - L1MC4a LINE L1 -1894 5914 5296 243 311 99 0 chr17 71293499 71293650 -18210903 - L1MC4a LINE L1 -1487 4659 4494 742 296 137 0 chr17 71293677 71293961 -18210592 - L2 LINE L2 -609 2705 2383 593 323 65 11 chr17 71294086 71294272 -18210281 - MER91A DNA MER1_type 0 196 1 386 288 13 20 chr17 71296807 71296960 -18207593 + GA-rich Low_complexity Low_complexity 3 154 0 405 0 0 0 chr17 71297020 71297065 -18207488 + (CCG)n Simple_repeat Simple_repeat 2 46 0 42 48 0 0 chr17 71297135 71297198 -18207355 + GC_rich Low_complexity Low_complexity 1 63 0 287 231 7 41 chr17 71297343 71297490 -18207063 + (CCCCG)n Simple_repeat Simple_repeat 2 143 0 2245 48 10 7 chr17 71298408 71298697 -18205856 + AluSx SINE Alu 1 290 -22 405 244 158 43 chr17 71302601 71302810 -18201743 - L1MC4a LINE L1 -178 5943 5709 315 282 115 52 chr17 71302879 71303131 -18201422 - L1MC4a LINE L1 -2201 5607 5340 1921 167 0 3 chr17 71306021 71306333 -18198220 + AluJb SINE Alu 1 311 -1 749 176 0 0 chr17 71306656 71306787 -18197766 - AluSp/q SINE Alu 0 313 183 2166 136 0 3 chr17 71306660 71306969 -18197584 - AluSx SINE Alu -4 308 1 2107 133 0 7 chr17 71307420 71307722 -18196831 - AluSx SINE Alu -8 304 5 269 358 117 0 chr17 71307767 71307887 -18196666 + L2 LINE L2 3137 3270 -2 570 165 0 0 chr17 71309563 71309666 -18194887 + (TG)n Simple_repeat Simple_repeat 2 104 0 1476 189 0 0 chr17 71309814 71310110 -18194443 + AluY SINE Alu 3 298 -13 2244 116 0 0 chr17 71311524 71311817 -18192736 + AluSx SINE Alu 1 293 -19 841 235 29 58 chr17 71311834 71312077 -18192476 + AluJb SINE Alu 45 280 -32 2113 123 0 16 chr17 71312684 71312993 -18191560 - AluSx SINE Alu -5 307 4 287 355 33 0 chr17 71313081 71313202 -18191351 - MIR3 SINE MIR -14 194 70 21 0 0 0 chr17 71313326 71313347 -18191206 + AT_rich Low_complexity Low_complexity 1 21 0 1973 117 8 0 chr17 71314508 71314774 -18189779 - AluSx SINE Alu -23 289 22 741 192 169 6 chr17 71315207 71315253 -18189300 + MER3 DNA MER1_type 2 75 -134 358 247 200 13 chr17 71315253 71315403 -18189150 - MER3 DNA MER1_type 0 209 32 1491 171 13 50 chr17 71315423 71315722 -18188831 - AluJo SINE Alu -24 288 1 281 277 174 38 chr17 71315761 71315945 -18188608 - L1ME3A LINE L1 0 6170 5962 647 222 51 51 chr17 71316045 71316261 -18188292 - L1MC5 LINE L1 -435 7526 7311 2007 115 10 14 chr17 71316613 71316901 -18187652 + AluSx SINE Alu 5 291 -21 2056 116 0 37 chr17 71317280 71317574 -18186979 + AluSx SINE Alu 10 292 -20 22 35 0 0 chr17 71317580 71317609 -18186944 + AT_rich Low_complexity Low_complexity 1 29 0 206 186 47 23 chr17 71317676 71317719 -18186834 + MIR3 SINE MIR 113 156 -52 308 239 161 39 chr17 71317758 71317888 -18186665 - MER117 DNA MER1_type -50 147 2 184 244 24 73 chr17 71318987 71319069 -18185484 - MIR SINE MIR -8 254 177 1321 171 12 113 chr17 71319874 71320040 -18184513 + AluJb SINE Alu 3 121 -181 2420 70 13 3 chr17 71320040 71320339 -18184214 + AluY SINE Alu 1 302 -9 1321 171 12 113 chr17 71320339 71320500 -18184053 + AluJb SINE Alu 121 297 -5 253 273 83 74 chr17 71320754 71320875 -18183678 - L2 LINE L2 -8 3305 3184 1275 144 23 110 chr17 71321026 71321325 -18183228 - AluJo SINE Alu -39 273 1 795 311 117 64 chr17 71321325 71321467 -18183086 - L2 LINE L2 -278 3035 2902 2221 120 0 0 chr17 71321467 71321767 -18182786 + AluSx SINE Alu 1 300 -12 795 311 117 64 chr17 71321767 71322616 -18181937 - L2 LINE L2 -411 2902 1988 2211 113 0 3 chr17 71323056 71323358 -18181195 - AluSq SINE Alu -12 301 1 422 252 15 52 chr17 71324364 71324499 -18180054 - MLT1I LTR MaLR 0 409 280 248 77 26 0 chr17 71325139 71325178 -18179375 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2189 130 0 0 chr17 71325178 71325479 -18179074 - AluSx SINE Alu -11 301 1 2549 65 0 7 chr17 71325635 71325942 -18178611 - AluY SINE Alu -6 305 1 2146 103 3 10 chr17 71326920 71327231 -18177322 + AluSx SINE Alu 1 312 0 3992 169 49 35 chr17 71327392 71328074 -18176479 + L1MB3 LINE L1 5306 6002 -181 1685 157 3 23 chr17 71328074 71328373 -18176180 - AluJo SINE Alu -6 306 14 3992 169 49 35 chr17 71328373 71328493 -18176060 + L1MB3 LINE L1 6002 6119 -64 274 100 0 100 chr17 71328495 71328555 -18175998 + AluSp/q SINE Alu 245 298 -5 234 143 0 0 chr17 71328555 71328597 -18175956 + L1MB3 LINE L1 6117 6158 -25 610 267 126 62 chr17 71328630 71329050 -18175503 - L1ME4a LINE L1 -277 5844 5398 317 329 14 29 chr17 71329106 71329246 -18175307 - L2 LINE L2 -4 3309 3172 441 0 0 0 chr17 71329706 71329755 -18174798 + (TG)n Simple_repeat Simple_repeat 2 50 0 2342 66 0 7 chr17 71329755 71330042 -18174511 - AluSq SINE Alu -28 285 1 1558 194 21 0 chr17 71330352 71330636 -18173917 - AluJb SINE Alu -21 291 2 228 67 0 0 chr17 71333314 71333344 -18171209 + (T)n Simple_repeat Simple_repeat 1 30 0 841 249 123 27 chr17 71335063 71335093 -18169460 + HAL1b LINE L1 621 647 -701 2256 107 0 0 chr17 71335093 71335437 -18169116 + AluSg SINE Alu 1 344 0 841 249 123 27 chr17 71335437 71335977 -18168576 + HAL1b LINE L1 647 1322 -26 347 293 92 70 chr17 71336402 71336771 -18167782 - L2 LINE L2 -556 2758 2382 270 247 12 59 chr17 71336950 71337035 -18167518 + Charlie4 DNA MER1_type 1881 1961 0 874 108 23 0 chr17 71337326 71337455 -18167098 + AluSq/x SINE Alu 2 133 -180 180 0 0 0 chr17 71337458 71337478 -18167075 + (CAA)n Simple_repeat Simple_repeat 2 21 0 518 209 119 8 chr17 71337524 71337658 -18166895 - MIR SINE MIR -83 179 31 1045 142 0 0 chr17 71337722 71337877 -18166676 - AluSg/x SINE Alu -17 295 141 275 254 32 0 chr17 71338827 71338890 -18165663 + L2 LINE L2 3245 3309 -4 2165 117 0 13 chr17 71339039 71339348 -18165205 - AluY SINE Alu -6 305 1 23 0 0 0 chr17 71339356 71339379 -18165174 + AT_rich Low_complexity Low_complexity 1 23 0 606 216 35 17 chr17 71339379 71339495 -18165058 - FLAM_A SINE Alu -15 118 1 2147 80 0 7 chr17 71339792 71340067 -18164486 + AluSx SINE Alu 25 297 -15 3448 196 204 34 chr17 71340067 71340963 -18163590 - Charlie1 DNA MER1_type -50 2711 1969 2195 117 3 0 chr17 71340963 71341263 -18163290 - AluSx SINE Alu -11 301 1 3448 196 204 34 chr17 71341263 71341550 -18163003 - Charlie1 DNA MER1_type -792 1969 9 1804 161 10 23 chr17 71343536 71343846 -18160707 - AluJb SINE Alu -6 306 1 205 339 0 88 chr17 71344029 71344200 -18160353 + L2 LINE L2 3117 3272 0 2454 77 3 13 chr17 71345570 71345883 -18158670 - AluSg SINE Alu 0 310 1 2285 94 0 0 chr17 71346457 71346744 -18157809 + AluSx SINE Alu 3 289 -23 575 264 56 53 chr17 71348616 71348919 -18155634 + L1ME4a LINE L1 5612 5915 -206 2186 112 0 0 chr17 71348929 71349216 -18155337 - AluSq SINE Alu -22 291 5 2260 81 40 0 chr17 71349376 71349673 -18154880 + AluY SINE Alu 1 309 -2 1539 155 10 56 chr17 71349778 71350081 -18154472 - AluJb SINE Alu -23 289 1 471 263 73 17 chr17 71350553 71350732 -18153821 + MIR SINE MIR 15 203 -59 21 36 0 0 chr17 71351004 71351032 -18153521 + AT_rich Low_complexity Low_complexity 1 28 0 2203 114 3 0 chr17 71354337 71354627 -18149926 - AluSx SINE Alu -16 296 6 258 132 53 0 chr17 71354928 71354966 -18149587 - L1MC/D LINE L1 -2272 5536 5497 2015 111 0 17 chr17 71355046 71355362 -18149191 - AluSq SINE Alu 0 311 1 2026 132 3 25 chr17 71355696 71356015 -18148538 - AluSx SINE Alu 0 312 1 218 282 0 28 chr17 71356631 71356702 -18147851 - L2 LINE L2 -14 3258 3190 2254 96 0 0 chr17 71356715 71357022 -18147531 - AluSg SINE Alu 0 307 1 1918 141 28 3 chr17 71357050 71357341 -18147212 + 7SLRNA srpRNA srpRNA 1 298 -22 371 222 0 19 chr17 71361300 71361408 -18143145 + (TATATG)n Simple_repeat Simple_repeat 3 108 0 2152 131 13 3 chr17 71361408 71361713 -18142840 - AluJb SINE Alu -4 308 1 270 268 55 61 chr17 71361876 71362040 -18142513 + MIR3 SINE MIR 36 198 -10 682 182 30 15 chr17 71362992 71363124 -18141429 + MER94 DNA DNA 1 134 0 1288 109 11 0 chr17 71363250 71363424 -18141129 - AluSg/x SINE Alu -9 303 128 343 249 101 101 chr17 71363499 71363561 -18140992 - MIR SINE MIR -51 211 150 1789 125 8 0 chr17 71363561 71363817 -18140736 - AluJo SINE Alu 0 312 55 343 249 101 101 chr17 71363817 71363943 -18140610 - MIR SINE MIR -111 151 23 754 233 56 37 chr17 71364489 71364704 -18139849 + MIR SINE MIR 15 233 -29 214 202 298 0 chr17 71365172 71365256 -18139297 - MER5A DNA MER1_type -79 110 2 2106 107 3 10 chr17 71365796 71366086 -18138467 + AluSx SINE Alu 1 288 -24 543 236 96 22 chr17 71366253 71366431 -18138122 - MIR SINE MIR -1 261 71 2058 146 0 16 chr17 71367738 71368054 -18136499 - AluSx SINE Alu -1 311 1 189 260 169 19 chr17 71369094 71369248 -18135305 + MER5A DNA MER1_type 7 183 -6 2262 88 0 36 chr17 71369347 71369653 -18134900 + AluSx SINE Alu 1 295 -17 2114 124 3 0 chr17 71370036 71370346 -18134207 - AluSq SINE Alu 0 311 1 522 136 58 4 chr17 71370483 71370744 -18133809 + (TA)n Simple_repeat Simple_repeat 1 275 0 341 111 0 0 chr17 71370744 71370798 -18133755 - Alu SINE Alu 0 302 249 729 169 15 15 chr17 71370810 71370940 -18133613 - FLAM_C SINE Alu -3 130 1 2120 104 32 0 chr17 71371062 71371342 -18133211 + AluSx SINE Alu 1 289 -23 3664 172 119 21 chr17 71371379 71371639 -18132914 - L1MB7 LINE L1 -2 6182 5949 2068 131 3 7 chr17 71371639 71371937 -18132616 + AluSx SINE Alu 1 297 -15 3664 172 119 21 chr17 71371937 71372594 -18131959 - L1MB7 LINE L1 -235 5949 5171 637 206 74 34 chr17 71372732 71372907 -18131646 - L1MB7 LINE L1 -986 5160 4979 341 279 55 24 chr17 71373355 71373520 -18131033 + MIR SINE MIR 93 262 0 2111 138 0 6 chr17 71373952 71374263 -18130290 - AluJo SINE Alu -3 309 1 2094 118 14 0 chr17 71375331 71375619 -18128934 - AluSx SINE Alu -20 292 1 26 0 0 0 chr17 71375622 71375648 -18128905 + AT_rich Low_complexity Low_complexity 1 26 0 1187 152 9 65 chr17 71375703 71375934 -18128619 + MER20 DNA MER1_type 2 219 0 232 234 52 39 chr17 71376298 71376375 -18128178 - L1P4 LINE L1 -575 5591 5514 1851 123 12 0 chr17 71376731 71376984 -18127569 + AluSx SINE Alu 40 295 -17 2428 71 0 7 chr17 71377656 71377951 -18126602 - AluY SINE Alu -18 293 1 25 51 0 0 chr17 71378561 71378600 -18125953 + AT_rich Low_complexity Low_complexity 1 39 0 652 167 0 0 chr17 71378603 71378711 -18125842 + FLAM_C SINE Alu 3 110 -33 2030 115 21 7 chr17 71378793 71379081 -18125472 - AluSx SINE Alu -20 292 1 528 211 61 70 chr17 71379211 71379424 -18125129 - L1MC4a LINE L1 -1909 5899 5689 589 284 69 15 chr17 71379425 71379629 -18124924 + MIR SINE MIR 42 256 -6 277 312 51 51 chr17 71379638 71379795 -18124758 - L1MC4a LINE L1 -2121 5687 5531 2186 124 3 3 chr17 71381318 71381616 -18122937 - AluSq SINE Alu -15 298 1 2261 104 7 0 chr17 71382963 71383261 -18121292 + AluSq SINE Alu 1 300 -13 211 290 101 0 chr17 71384508 71384577 -18119976 + L2 LINE L2 3232 3307 -6 2433 76 0 0 chr17 71384970 71385271 -18119282 + AluY SINE Alu 1 301 -10 261 83 0 0 chr17 71386652 71386688 -18117865 + (TG)n Simple_repeat Simple_repeat 1 36 0 2034 133 7 3 chr17 71386813 71387107 -18117446 + AluSx SINE Alu 1 295 -17 1938 108 29 50 chr17 71387644 71387986 -18116567 + THE1C LTR MaLR 1 335 -40 227 184 0 0 chr17 71388158 71388196 -18116357 + THE1C LTR MaLR 391 428 0 1093 194 126 0 chr17 71388284 71388562 -18115991 - MER33 DNA MER1_type -11 313 1 1179 127 0 0 chr17 71389644 71389810 -18114743 - AluSg/x SINE Alu -6 304 139 2343 101 3 0 chr17 71389979 71390286 -18114267 - AluSx SINE Alu -4 308 1 322 325 32 25 chr17 71390313 71390470 -18114083 - L1ME LINE L1 -516 5605 5448 329 322 55 49 chr17 71391006 71391236 -18113317 - MIR SINE MIR -13 249 18 1509 152 74 7 chr17 71392108 71392378 -18112175 - AluJb SINE Alu 0 312 25 1995 187 24 19 chr17 71392476 71392860 -18111693 - L1MB2 LINE L1 -7 6164 5776 1401 136 36 0 chr17 71392860 71393081 -18111472 - MER46A DNA MER2_type -4 232 4 1995 187 24 19 chr17 71393081 71393113 -18111440 - L1MB2 LINE L1 -395 5776 5746 1486 230 32 37 chr17 71393113 71393174 -18111379 - L1MB2 LINE L1 -34 6137 6077 2135 128 0 0 chr17 71393174 71393471 -18111082 - AluSx SINE Alu -13 299 3 1486 230 32 37 chr17 71393471 71393838 -18110715 - L1MB2 LINE L1 -94 6077 5448 366 322 123 32 chr17 71394595 71395027 -18109526 - L2 LINE L2 -654 2660 2190 189 0 0 0 chr17 71395436 71395457 -18109096 + (T)n Simple_repeat Simple_repeat 1 21 0 319 295 78 21 chr17 71395516 71395709 -18108844 - MIR SINE MIR -3 259 56 2506 75 10 0 chr17 71397764 71398071 -18106482 - AluSq SINE Alu -3 310 1 216 0 0 0 chr17 71399607 71399631 -18104922 + (T)n Simple_repeat Simple_repeat 1 24 0 2369 138 63 0 chr17 71400204 71400601 -18103952 + MSTA LTR MaLR 7 428 0 2213 79 72 10 chr17 71401793 71402083 -18102470 + AluSg SINE Alu 1 308 -2 2245 74 44 7 chr17 71402669 71402967 -18101586 + AluY SINE Alu 1 309 -2 198 203 43 72 chr17 71403040 71403109 -18101444 - L2 LINE L2 0 3272 3206 2309 92 0 0 chr17 71403596 71403897 -18100656 - AluSx SINE Alu 0 301 1 1483 172 57 24 chr17 71404086 71404383 -18100170 - AluJo SINE Alu -5 307 1 1097 247 65 19 chr17 71404538 71404846 -18099707 + Charlie1a DNA MER1_type 1 322 -1133 407 274 25 38 chr17 71404932 71405089 -18099464 + Charlie1a DNA MER1_type 337 491 -964 26 21 0 42 chr17 71405091 71405109 -18099444 + AT_rich Low_complexity Low_complexity 1 18 -28 1597 178 56 0 chr17 71405109 71405378 -18099175 - AluJb SINE Alu -28 284 1 26 21 0 42 chr17 71405378 71405407 -18099146 + AT_rich Low_complexity Low_complexity 18 46 0 604 164 66 16 chr17 71405413 71405535 -18099018 + Charlie1a DNA MER1_type 481 608 -847 254 212 221 53 chr17 71405796 71405909 -18098644 - MER21B LTR ERV1 -1 862 731 2953 229 103 19 chr17 71405920 71406676 -18097877 - MER21B LTR ERV1 -1 862 43 331 297 0 0 chr17 71406676 71406750 -18097803 - MER21B LTR ERV1 -771 92 19 2020 128 3 0 chr17 71406753 71407050 -18097503 + AluSx SINE Alu 1 298 -14 2593 128 57 2 chr17 71407157 71407563 -18096990 + MSTA LTR MaLR 1 428 0 523 213 65 30 chr17 71407969 71408138 -18096415 + L1ME4a LINE L1 5942 6116 -5 486 222 148 0 chr17 71408783 71408918 -18095635 + MIR SINE MIR 108 262 0 254 245 0 0 chr17 71409038 71409091 -18095462 + L2 LINE L2 3220 3272 0 430 301 204 0 chr17 71409566 71409762 -18094791 - MIR SINE MIR -2 260 25 1990 106 0 4 chr17 71409946 71410221 -18094332 - AluSx SINE Alu -38 274 1 26 64 0 0 chr17 71410226 71410273 -18094280 + AT_rich Low_complexity Low_complexity 1 47 0 2050 105 3 10 chr17 71411462 71411757 -18092796 - AluSc SINE Alu -16 293 1 2185 80 3 29 chr17 71411767 71412080 -18092473 - AluY SINE Alu -6 305 1 23 68 0 0 chr17 71412543 71412587 -18091966 + AT_rich Low_complexity Low_complexity 1 44 0 2225 97 3 10 chr17 71413021 71413330 -18091223 - AluSc SINE Alu -2 307 1 1800 166 61 3 chr17 71413400 71413743 -18090810 + MER47A DNA MER2_type 1 363 -3 21 0 0 0 chr17 71414450 71414471 -18090082 + AT_rich Low_complexity Low_complexity 1 21 0 1855 151 0 31 chr17 71414539 71414857 -18089696 - AluSx SINE Alu -4 308 1 1954 180 25 14 chr17 71414899 71415265 -18089288 - MLT1B LTR MaLR -4 386 17 303 232 214 18 chr17 71415361 71415473 -18089080 + L2 LINE L2 3172 3305 -8 2207 102 0 0 chr17 71415843 71416137 -18088416 + AluSq SINE Alu 1 294 -19 1731 137 25 0 chr17 71417306 71417583 -18086970 + AluSx SINE Alu 1 284 -28 405 0 0 0 chr17 71417583 71417628 -18086925 + (CA)n Simple_repeat Simple_repeat 2 46 0 1778 126 0 40 chr17 71417788 71418090 -18086463 - AluJb SINE Alu -22 290 1 609 240 223 35 chr17 71419772 71420013 -18084540 + MLT1L LTR MaLR 257 562 -53 875 201 67 67 chr17 71420013 71420062 -18084491 + MER58A DNA MER1_type 1 49 -2371 1735 178 13 0 chr17 71420062 71420360 -18084193 - AluJb SINE Alu -10 302 1 875 201 67 67 chr17 71420360 71420534 -18084019 + MER58A DNA MER1_type 48 224 0 609 240 223 35 chr17 71420534 71420579 -18083974 + MLT1L LTR MaLR 562 597 -18 2086 140 0 0 chr17 71421525 71421832 -18082721 - AluSx SINE Alu -5 307 1 426 285 76 14 chr17 71422088 71422232 -18082321 + L2 LINE L2 3158 3310 -3 303 270 95 69 chr17 71422567 71422756 -18081797 - MIR3 SINE MIR -12 196 3 196 323 125 0 chr17 71425570 71425666 -18078887 - MIR SINE MIR -65 143 36 517 92 13 0 chr17 71425887 71425963 -18078590 + MADE1 DNA Mariner 4 80 0 180 250 0 0 chr17 71426293 71426341 -18078212 + (CCCCAG)n Simple_repeat Simple_repeat 4 51 0 1872 141 3 3 chr17 71426567 71426873 -18077680 - AluSx SINE Alu -6 306 1 193 333 130 22 chr17 71426989 71427127 -18077426 - MIR3 SINE MIR -50 158 6 492 279 16 98 chr17 71427695 71427939 -18076614 + MIR SINE MIR 29 252 -10 240 319 57 38 chr17 71429064 71429274 -18075279 - L2 LINE L2 -735 2579 2366 807 252 92 14 chr17 71429327 71429545 -18075008 + MIR SINE MIR 28 262 0 195 306 103 69 chr17 71429598 71430092 -18074461 - L2 LINE L2 -1060 2254 1744 2421 114 19 24 chr17 71431618 71431995 -18072558 - THE1C LTR MaLR 0 375 1 320 257 7 88 chr17 71432075 71432204 -18072349 - MIR SINE MIR -3 259 140 2177 114 0 3 chr17 71432204 71432510 -18072043 - AluSg SINE Alu -5 305 1 1507 186 0 36 chr17 71433774 71433911 -18070642 + AluJo SINE Alu 1 141 -171 2104 104 10 3 chr17 71433911 71434219 -18070334 + AluSq SINE Alu 1 310 -3 1507 186 0 36 chr17 71434219 71434388 -18070165 + AluJo SINE Alu 141 296 -16 1745 139 24 3 chr17 71435097 71435384 -18069169 - AluSx SINE Alu -16 296 4 399 313 45 56 chr17 71435413 71435681 -18068872 + L2 LINE L2 2622 2886 -428 360 309 45 0 chr17 71435685 71435795 -18068758 + L2 LINE L2 3108 3222 -50 196 327 75 19 chr17 71436116 71436223 -18068330 - MIR SINE MIR -117 145 33 213 238 48 36 chr17 71437048 71437132 -18067421 + MIR SINE MIR 110 194 -68 412 248 43 0 chr17 71437339 71437456 -18067097 + MER104 DNA Tc2 6 127 -53 201 100 50 0 chr17 71437961 71438001 -18066552 + (CA)n Simple_repeat Simple_repeat 2 43 0 296 27 0 0 chr17 71438145 71438182 -18066371 - tRNA-Cys-TGC tRNA tRNA -38 37 1 1883 130 0 43 chr17 71438825 71439149 -18065404 - AluJb SINE Alu -2 310 1 240 100 0 0 chr17 71439269 71439309 -18065244 + (CA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr17 71442009 71442030 -18062523 + AT_rich Low_complexity Low_complexity 1 21 0 1574 167 7 14 chr17 71442033 71442350 -18062203 + AluJo SINE Alu 1 315 0 202 26 79 26 chr17 71442884 71442922 -18061631 + T-rich Low_complexity Low_complexity 1 40 0 184 321 0 0 chr17 71443111 71443167 -18061386 + MIR SINE MIR 53 108 -154 387 0 0 0 chr17 71444374 71444417 -18060136 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1269 63 0 0 chr17 71445737 71445923 -18058630 + AluY SINE Alu 125 310 0 2219 104 3 3 chr17 71446339 71446648 -18057905 - AluSx SINE Alu -3 309 1 1977 121 87 38 chr17 71447506 71447853 -18056700 - THE1B LTR MaLR 0 364 1 1790 229 59 14 chr17 71448897 71449337 -18055216 + MLT1C LTR MaLR 6 465 -2 236 258 147 55 chr17 71450382 71450545 -18054008 + MIR SINE MIR 81 258 -4 2731 82 27 5 chr17 71450545 71450912 -18053641 + THE1C LTR MaLR 1 375 0 2065 137 0 3 chr17 71451498 71451811 -18052742 - AluSx SINE Alu 0 312 1 445 264 0 4 chr17 71451921 71452073 -18052480 - MIR SINE MIR -6 256 51 1434 187 0 29 chr17 71452125 71452398 -18052155 + AluJb SINE Alu 5 269 -43 240 35 0 0 chr17 71452847 71452876 -18051677 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 1979 150 0 0 chr17 71453958 71454264 -18050289 + AluJo SINE Alu 5 310 -2 435 137 0 0 chr17 71455924 71455997 -18048556 + (CA)n Simple_repeat Simple_repeat 2 74 0 2389 96 0 13 chr17 71456413 71456725 -18047828 - AluSg SINE Alu -2 308 1 5994 164 33 11 chr17 71456742 71458036 -18046517 - L1MC1 LINE L1 0 6333 5016 1717 164 3 39 chr17 71458418 71458730 -18045823 - AluJo SINE Alu -11 301 1 236 133 22 0 chr17 71460417 71460462 -18044091 + MIR3 SINE MIR 118 163 -45 1933 154 14 0 chr17 71460595 71460888 -18043665 - AluJo SINE Alu -15 297 1 212 167 0 0 chr17 71460900 71460942 -18043611 + A-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr17 71462391 71462411 -18042142 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2123 65 6 101 chr17 71463221 71463558 -18040995 - AluSq SINE Alu -8 305 1 21 57 0 0 chr17 71464029 71464064 -18040489 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 71464673 71464694 -18039859 + AT_rich Low_complexity Low_complexity 1 21 0 1439 184 83 11 chr17 71464994 71465271 -18039282 - AluJo SINE Alu -15 297 1 203 263 18 0 chr17 71466101 71466158 -18038395 + CT-rich Low_complexity Low_complexity 1 58 0 2235 77 3 21 chr17 71466700 71466987 -18037566 + AluSp SINE Alu 18 299 -14 222 277 59 10 chr17 71466988 71467089 -18037464 + MIR SINE MIR 33 138 -124 493 302 149 41 chr17 71467978 71468617 -18035936 - L3 LINE CR1 -199 1378 671 2114 130 0 16 chr17 71468914 71469230 -18035323 - AluSx SINE Alu -1 311 1 219 323 93 19 chr17 71469906 71470067 -18034486 - MIR SINE MIR -13 249 77 420 250 72 40 chr17 71470280 71470432 -18034121 + LTR37B LTR ERV1 1 157 -311 2382 94 0 0 chr17 71470448 71470745 -18033808 + AluSx SINE Alu 1 297 -15 836 159 74 6 chr17 71470746 71470909 -18033644 - L1MB8 LINE L1 -7 6171 5998 821 132 158 121 chr17 71470996 71471269 -18033284 - MER4C LTR ERV1 -2 463 181 2250 125 3 0 chr17 71471272 71471584 -18032969 - AluSp SINE Alu 0 313 1 267 221 69 23 chr17 71471691 71471822 -18032731 - L1ME4a LINE L1 -18 6103 5967 6108 90 34 0 chr17 71471940 71473044 -18031509 + L1PA13 LINE L1 5026 6163 0 229 291 0 0 chr17 71474304 71474359 -18030194 + L2 LINE L2 3208 3262 -10 183 306 12 24 chr17 71474501 71474586 -18029967 + L2 LINE L2 1970 2053 -1261 2372 104 7 0 chr17 71474851 71475159 -18029394 + AluSg SINE Alu 1 310 0 2278 154 53 72 chr17 71476197 71476482 -18028071 - MLT1C LTR MaLR 0 467 178 1919 111 25 7 chr17 71476482 71476790 -18027763 - AluY SINE Alu 0 313 1 2278 154 53 72 chr17 71476790 71476961 -18027592 - MLT1C LTR MaLR -289 178 17 2035 138 52 35 chr17 71476961 71477330 -18027223 - THE1C LTR MaLR 0 375 1 2278 154 53 72 chr17 71477330 71477345 -18027208 - MLT1C LTR MaLR -450 17 3 385 239 31 59 chr17 71477657 71477879 -18026674 - L1MC5 LINE L1 -17 7944 7729 388 285 51 29 chr17 71478098 71478235 -18026318 + L2 LINE L2 3133 3272 0 439 35 0 0 chr17 71479840 71479898 -18024655 - L1MA4 LINE L1 -7 6293 6236 390 136 0 0 chr17 71479935 71479994 -18024559 + L1MA4 LINE L1 6228 6286 -14 5118 159 93 2 chr17 71479994 71481068 -18023485 - L1MA4 LINE L1 -65 6235 5061 353 252 146 0 chr17 71481493 71481616 -18022937 + L2 LINE L2 2412 2552 -762 396 0 0 0 chr17 71482383 71482427 -18022126 + (TA)n Simple_repeat Simple_repeat 2 45 0 235 93 0 56 chr17 71482732 71482786 -18021767 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 2236 136 0 0 chr17 71482803 71483111 -18021442 - AluSx SINE Alu -4 308 1 629 131 10 0 chr17 71483276 71483375 -18021178 - L1MB4 LINE L1 -28 6152 6053 1723 96 0 9 chr17 71483376 71483605 -18020948 - AluSq SINE Alu -15 298 72 2168 121 0 16 chr17 71483605 71483911 -18020642 - AluSx SINE Alu -11 301 1 327 192 0 0 chr17 71486288 71486361 -18018192 + (TG)n Simple_repeat Simple_repeat 2 74 0 241 248 26 98 chr17 71486657 71486810 -18017743 + MIR SINE MIR 112 253 -9 957 207 161 84 chr17 71487290 71487657 -18016896 - MSTD LTR MaLR -1 395 1 1914 151 3 3 chr17 71487856 71488148 -18016405 + AluJb SINE Alu 7 298 -14 2009 109 0 56 chr17 71488556 71488899 -18015654 - AluSq SINE Alu 0 326 1 219 88 0 0 chr17 71489658 71489692 -18014861 + (TCCCC)n Simple_repeat Simple_repeat 5 38 0 2109 118 4 0 chr17 71489694 71489973 -18014580 - AluSx SINE Alu -32 280 1 2296 92 7 0 chr17 71490246 71490540 -18014013 + AluSp SINE Alu 1 296 -17 189 368 48 16 chr17 71491019 71491144 -18013409 - MIR3 SINE MIR -11 197 69 244 274 60 43 chr17 71491549 71491666 -18012887 - L2 LINE L2 -20 3293 3175 238 250 0 0 chr17 71491778 71491822 -18012731 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 187 302 0 0 chr17 71491840 71491903 -18012650 - L2 LINE L2 -298 2974 2912 355 188 25 38 chr17 71491999 71492079 -18012474 - MLT1A1 LTR MaLR -279 86 8 362 245 100 90 chr17 71492079 71492369 -18012184 - L2 LINE L2 -995 2319 2027 1059 209 11 69 chr17 71492961 71493238 -18011315 + MLT1A1 LTR MaLR 8 268 -97 189 265 48 60 chr17 71493513 71493596 -18010957 - MIR3 SINE MIR -9 199 118 23 0 0 0 chr17 71493965 71493988 -18010565 + AT_rich Low_complexity Low_complexity 1 23 0 2354 102 0 7 chr17 71495261 71495565 -18008988 - AluSx SINE Alu -10 302 1 2307 81 3 17 chr17 71495691 71495988 -18008565 - AluY SINE Alu -17 294 2 239 293 27 13 chr17 71497096 71497171 -18007382 + MIR3 SINE MIR 109 184 -24 2259 97 3 13 chr17 71497345 71497643 -18006910 + AluSq SINE Alu 9 303 -10 506 290 36 24 chr17 71498537 71498785 -18005768 - MARNA DNA Mariner -153 433 183 207 111 0 28 chr17 71498864 71498900 -18005653 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 437 219 133 0 chr17 71498904 71499009 -18005544 - FLAM_A SINE Alu -13 120 2 2143 129 0 0 chr17 71499044 71499339 -18005214 + AluSx SINE Alu 1 295 -17 289 184 0 0 chr17 71499353 71499402 -18005151 + FAM SINE Alu 125 173 -2 254 246 0 0 chr17 71499477 71499534 -18005019 + L2 LINE L2 3248 3304 -9 312 292 58 11 chr17 71500275 71500424 -18004129 - MIR SINE MIR -63 145 9 1552 225 48 101 chr17 71502163 71502194 -18002359 - MLT2B1 LTR ERVL -2 518 487 393 22 0 0 chr17 71502194 71502240 -18002313 + (TG)n Simple_repeat Simple_repeat 2 47 0 1552 225 48 101 chr17 71502240 71502755 -18001798 - MLT2B1 LTR ERVL -33 487 1 363 250 12 0 chr17 71502851 71502935 -18001618 + L2 LINE L2 3188 3272 0 1584 55 0 30 chr17 71503002 71503204 -18001349 - MER107 DNA MER1_type 0 197 2 1696 152 0 4 chr17 71503777 71504040 -18000513 - AluJb SINE Alu -13 299 38 348 330 6 28 chr17 71705547 71705729 -17798824 + MER5B DNA MER1_type 1 178 0 2143 129 0 0 chr17 71705878 71706173 -17798380 - AluSx SINE Alu -17 295 1 437 219 133 0 chr17 71706208 71706313 -17798240 + FLAM_A SINE Alu 2 120 -13 207 111 0 28 chr17 71706316 71706352 -17798201 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 506 290 36 24 chr17 71706431 71706679 -17797874 + MARNA DNA Mariner 183 433 -153 2218 97 3 20 chr17 71707573 71707873 -17796680 - AluSq SINE Alu -10 303 9 957 207 161 84 chr17 71708554 71708921 -17795632 - MSTD LTR MaLR -1 395 1 1795 163 3 10 chr17 71709114 71709415 -17795138 + AluJb SINE Alu 1 299 -13 1961 112 0 62 chr17 71709823 71710188 -17794365 - AluSq SINE Alu 0 346 1 210 37 0 0 chr17 71710947 71710974 -17793579 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 2074 154 0 0 chr17 71711752 71712058 -17792495 + AluJo SINE Alu 5 310 -2 435 137 0 0 chr17 71713733 71713806 -17790747 + (CA)n Simple_repeat Simple_repeat 2 74 0 2389 96 0 13 chr17 71714222 71714534 -17790019 - AluSg SINE Alu -2 308 1 3424 191 28 34 chr17 71714551 71715910 -17788643 - L1MC1 LINE L1 0 6333 5016 1717 164 3 39 chr17 71716292 71716604 -17787949 - AluJo SINE Alu -11 301 1 281 147 0 18 chr17 71717145 71717202 -17787351 - Alu SINE Alu -263 39 1 267 221 69 23 chr17 71717291 71717422 -17787131 - L1ME4a LINE L1 -18 6103 5967 6078 91 34 0 chr17 71717540 71718644 -17785909 + L1PA13 LINE L1 5026 6163 0 229 291 0 0 chr17 71719904 71719959 -17784594 + L2 LINE L2 3208 3262 -10 183 306 12 24 chr17 71720101 71720186 -17784367 + L2 LINE L2 1970 2053 -1261 849 110 0 0 chr17 71720451 71720560 -17783993 + AluSg SINE Alu 1 109 -201 252 86 0 0 chr17 71720661 71720696 -17783857 + (A)n Simple_repeat Simple_repeat 1 35 0 2278 154 53 72 chr17 71721724 71722009 -17782544 - MLT1C LTR MaLR 0 467 178 1919 111 25 7 chr17 71722009 71722322 -17782231 - AluY SINE Alu 0 318 1 2278 154 53 72 chr17 71722322 71722493 -17782060 - MLT1C LTR MaLR -289 178 17 2035 138 52 35 chr17 71722493 71722862 -17781691 - THE1C LTR MaLR 0 375 1 2278 154 53 72 chr17 71722862 71722877 -17781676 - MLT1C LTR MaLR -450 17 3 385 239 31 59 chr17 71723189 71723411 -17781142 - L1MC5 LINE L1 -17 7944 7729 388 285 51 29 chr17 71723630 71723767 -17780786 + L2 LINE L2 3133 3272 0 372 80 0 0 chr17 71725438 71725488 -17779065 + L1MA4 LINE L1 6237 6286 -14 5118 159 93 2 chr17 71725488 71726562 -17777991 - L1MA4 LINE L1 -65 6235 5061 353 252 146 0 chr17 71726987 71727110 -17777443 + L2 LINE L2 2412 2552 -762 414 0 0 0 chr17 71727877 71727923 -17776630 + (TA)n Simple_repeat Simple_repeat 2 47 0 235 93 0 56 chr17 71728228 71728282 -17776271 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 2236 136 0 0 chr17 71728299 71728607 -17775946 - AluSx SINE Alu -4 308 1 629 131 10 0 chr17 71728772 71728871 -17775682 - L1MB4 LINE L1 -28 6152 6053 1723 96 0 9 chr17 71728872 71729101 -17775452 - AluSq SINE Alu -15 298 72 2168 121 0 16 chr17 71729101 71729407 -17775146 - AluSx SINE Alu -11 301 1 234 260 39 0 chr17 71732891 71732968 -17771585 - MER5B DNA MER1_type -6 172 93 653 283 29 33 chr17 71733001 71733241 -17771312 + MIR SINE MIR 20 258 -4 290 278 45 91 chr17 71733640 71733838 -17770715 + MIR3 SINE MIR 4 192 -16 409 271 8 0 chr17 71734286 71734404 -17770149 - L2 LINE L2 -6 3307 3189 855 270 62 31 chr17 71734595 71734884 -17769669 + MLT1H LTR MaLR 13 310 -239 25 31 0 0 chr17 71735567 71735599 -17768954 + AT_rich Low_complexity Low_complexity 1 32 0 257 167 33 17 chr17 71735976 71736036 -17768517 - MLT1G1 LTR MaLR -12 583 523 613 284 15 58 chr17 71736190 71736451 -17768102 - MLT1H LTR MaLR -277 272 23 630 261 85 24 chr17 71736610 71736821 -17767732 + MER58A DNA MER1_type 1 224 0 2079 97 0 73 chr17 71737589 71737918 -17766635 + AluSx SINE Alu 1 305 -7 1967 189 107 13 chr17 71737974 71738434 -17766119 + MLT1D LTR MaLR 1 503 -2 312 292 58 11 chr17 71739795 71739944 -17764609 - MIR SINE MIR -63 145 9 1537 227 48 101 chr17 71741683 71741714 -17762839 - MLT2B1 LTR ERVL -2 518 487 411 21 0 0 chr17 71741714 71741762 -17762791 + (TG)n Simple_repeat Simple_repeat 2 49 0 1537 227 48 101 chr17 71741762 71742277 -17762276 - MLT2B1 LTR ERVL -33 487 1 363 250 12 0 chr17 71742373 71742457 -17762096 + L2 LINE L2 3188 3272 0 1584 55 0 30 chr17 71742524 71742726 -17761827 - MER107 DNA MER1_type 0 197 2 1706 152 0 4 chr17 71743299 71743562 -17760991 - AluJb SINE Alu -13 299 38 2241 121 0 0 chr17 71744236 71744533 -17760020 - AluSx SINE Alu -15 297 1 321 203 58 109 chr17 71744621 71744759 -17759794 + L2 LINE L2 2619 2749 -565 2296 92 7 0 chr17 71745074 71745368 -17759185 + AluSp SINE Alu 1 296 -17 189 368 48 16 chr17 71745848 71745973 -17758580 - MIR3 SINE MIR -11 197 69 244 274 60 43 chr17 71746379 71746496 -17758057 - L2 LINE L2 -20 3293 3175 238 250 0 0 chr17 71746608 71746652 -17757901 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 187 302 0 0 chr17 71746670 71746733 -17757820 - L2 LINE L2 -298 2974 2912 355 188 25 38 chr17 71746829 71746909 -17757644 - MLT1A1 LTR MaLR -279 86 8 323 218 52 86 chr17 71747026 71747200 -17757353 - L2 LINE L2 -1120 2194 2027 1059 209 11 69 chr17 71747792 71748069 -17756484 + MLT1A1 LTR MaLR 8 268 -97 189 265 48 60 chr17 71748344 71748427 -17756126 - MIR3 SINE MIR -9 199 118 23 0 0 0 chr17 71748796 71748819 -17755734 + AT_rich Low_complexity Low_complexity 1 23 0 2354 102 0 7 chr17 71750092 71750396 -17754157 - AluSx SINE Alu -10 302 1 2319 77 3 17 chr17 71750522 71750819 -17753734 - AluY SINE Alu -17 294 2 412 328 119 34 chr17 71751908 71752077 -17752476 + L2 LINE L2 2904 3057 -256 1908 126 0 0 chr17 71752077 71752338 -17752215 - AluSx SINE Alu -51 261 1 412 328 119 34 chr17 71752338 71752546 -17752007 + L2 LINE L2 3057 3313 0 25 0 0 0 chr17 71752766 71752791 -17751762 + AT_rich Low_complexity Low_complexity 1 25 0 315 222 157 0 chr17 71753021 71753129 -17751424 + L1ME4a LINE L1 5759 5883 -238 1579 109 19 23 chr17 71753357 71753613 -17750940 + Tigger7 DNA MER2_type 2229 2483 -4 328 306 61 65 chr17 71753803 71754204 -17750349 - MLT1J LTR MaLR -17 587 197 2203 88 0 60 chr17 71754319 71754638 -17749915 + AluSc SINE Alu 1 300 -9 1634 158 3 33 chr17 71754886 71755189 -17749364 - AluJo SINE Alu -17 295 2 188 354 115 48 chr17 71755455 71755696 -17748857 + L3 LINE CR1 974 1256 -321 2241 115 0 0 chr17 71755696 71755991 -17748562 + AluSx SINE Alu 1 295 -17 188 354 115 48 chr17 71755991 71756167 -17748386 + L3 LINE CR1 1256 1419 -158 2267 74 0 0 chr17 71756358 71756641 -17747912 + AluSc SINE Alu 10 292 -17 330 305 103 17 chr17 71756743 71756917 -17747636 + L2 LINE L2 3076 3264 -8 279 301 120 15 chr17 71758978 71759111 -17745442 + MIR SINE MIR 95 241 -21 512 241 127 0 chr17 71759150 71759316 -17745237 + MER5A DNA MER1_type 1 187 -2 227 30 0 30 chr17 71759489 71759522 -17745031 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 258 219 0 0 chr17 71759523 71759564 -17744989 - AluJ/FRAM SINE Alu -46 256 216 2107 112 20 0 chr17 71759589 71759884 -17744669 - AluSx SINE Alu -11 301 1 833 104 24 8 chr17 71759890 71760015 -17744538 - AluJo SINE Alu -174 138 12 201 100 50 0 chr17 71760917 71760957 -17743596 + (CA)n Simple_repeat Simple_repeat 2 43 0 296 27 0 0 chr17 71761101 71761138 -17743415 - tRNA-Cys-TGC tRNA tRNA -38 37 1 1874 133 0 43 chr17 71761781 71762105 -17742448 - AluJb SINE Alu -2 310 1 222 105 0 0 chr17 71762225 71762263 -17742290 + (CA)n Simple_repeat Simple_repeat 2 39 0 1574 167 7 14 chr17 71764983 71765300 -17739253 + AluJo SINE Alu 1 315 0 202 26 79 26 chr17 71765834 71765872 -17738681 + T-rich Low_complexity Low_complexity 1 40 0 184 321 0 0 chr17 71766061 71766117 -17738436 + MIR SINE MIR 53 108 -154 387 0 0 0 chr17 71767323 71767366 -17737187 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1269 63 0 0 chr17 71768686 71768872 -17735681 + AluY SINE Alu 125 310 0 2219 104 3 3 chr17 71769288 71769597 -17734956 - AluSx SINE Alu -3 309 1 1963 121 87 38 chr17 71770224 71770571 -17733982 - THE1B LTR MaLR 0 364 1 1790 229 59 14 chr17 71771615 71772055 -17732498 + MLT1C LTR MaLR 6 465 -2 236 258 147 55 chr17 71773100 71773263 -17731290 + MIR SINE MIR 81 258 -4 2731 82 27 5 chr17 71773263 71773630 -17730923 + THE1C LTR MaLR 1 375 0 2065 137 0 3 chr17 71774215 71774528 -17730025 - AluSx SINE Alu 0 312 1 445 264 0 4 chr17 71774638 71774790 -17729763 - MIR SINE MIR -6 256 51 1428 186 0 33 chr17 71774842 71775116 -17729437 + AluJb SINE Alu 5 269 -43 257 133 22 0 chr17 71776453 71776498 -17728055 + MIR3 SINE MIR 118 163 -45 1817 154 14 0 chr17 71776631 71776924 -17727629 - AluJo SINE Alu -15 297 1 212 167 0 0 chr17 71776936 71776978 -17727575 + A-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr17 71778427 71778447 -17726106 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1991 71 6 95 chr17 71779257 71779593 -17724960 - AluSq SINE Alu -7 306 1 21 57 0 0 chr17 71780064 71780099 -17724454 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 71780708 71780729 -17723824 + AT_rich Low_complexity Low_complexity 1 21 0 1432 188 83 11 chr17 71781029 71781306 -17723247 - AluJo SINE Alu -5 297 1 203 263 18 0 chr17 71782136 71782193 -17722360 + CT-rich Low_complexity Low_complexity 1 58 0 2112 77 3 21 chr17 71782735 71783022 -17721531 + AluSp SINE Alu 18 299 -14 261 277 59 10 chr17 71783023 71783124 -17721429 + MIR SINE MIR 33 138 -124 766 310 140 35 chr17 71784013 71784678 -17719875 - L3 LINE CR1 -199 1378 644 1990 130 0 16 chr17 71784949 71785265 -17719288 - AluSx SINE Alu -1 311 1 290 333 89 18 chr17 71785941 71786109 -17718444 - MIR SINE MIR -13 249 70 417 257 72 40 chr17 71786315 71786467 -17718086 + LTR37B LTR ERV1 1 157 -311 2254 94 0 0 chr17 71786483 71786780 -17717773 + AluSx SINE Alu 1 297 -15 831 159 74 6 chr17 71786781 71786944 -17717609 - L1MB8 LINE L1 -7 6171 5998 824 136 158 121 chr17 71787031 71787304 -17717249 - MER4C LTR ERV1 -2 463 181 1287 126 5 0 chr17 71787307 71787505 -17717048 - AluSp SINE Alu 0 313 115 21 0 0 0 chr17 71788102 71788123 -17716430 + AT_rich Low_complexity Low_complexity 1 21 0 2008 126 23 0 chr17 71788310 71788612 -17715941 - AluSx SINE Alu -3 309 1 2445 63 0 0 chr17 71790339 71790641 -17713912 + AluY SINE Alu 1 302 -9 474 328 86 45 chr17 71790946 71791201 -17713352 - MIR SINE MIR 0 262 3 199 221 88 29 chr17 71791703 71791771 -17712782 - MIR3 SINE MIR -9 199 128 394 246 88 26 chr17 71792451 71792565 -17711988 + MIR SINE MIR 3 123 -139 1773 145 20 3 chr17 71793750 71794046 -17710507 - AluSx SINE Alu -3 309 9 408 202 32 11 chr17 71794154 71794248 -17710305 + MIR SINE MIR 49 144 -118 2180 78 7 3 chr17 71795361 71795655 -17708898 - AluY SINE Alu -16 295 1 1812 119 0 40 chr17 71799883 71800186 -17704367 + AluSx SINE Alu 1 291 -21 2081 115 0 14 chr17 71800550 71800846 -17703707 - AluSx SINE Alu -20 292 1 217 200 229 0 chr17 71800902 71800972 -17703581 - MIR SINE MIR -105 157 72 2310 66 0 3 chr17 71801100 71801389 -17703164 + AluY SINE Alu 1 288 -23 1317 222 43 51 chr17 71801881 71802275 -17702278 - L1MEc LINE L1 -3918 2478 2083 1546 235 32 24 chr17 71802275 71802738 -17701815 - MLT1C LTR MaLR 0 467 1 1317 222 43 51 chr17 71802738 71802755 -17701798 - L1MEc LINE L1 -4313 2083 2067 180 0 0 0 chr17 71802755 71802775 -17701778 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1317 222 43 51 chr17 71802775 71802893 -17701660 - L1MEc LINE L1 -4329 2067 1952 245 296 68 11 chr17 71804417 71804505 -17700048 - MIR SINE MIR -13 249 157 351 245 200 39 chr17 71804516 71804671 -17699882 + MLT1D LTR MaLR 10 189 -316 1888 121 10 17 chr17 71804762 71805059 -17699494 - AluJb SINE Alu -17 295 1 453 308 29 35 chr17 71805110 71805282 -17699271 - MIR SINE MIR -79 183 13 2136 113 7 0 chr17 71806326 71806608 -17697945 + AluSx SINE Alu 3 286 -26 361 234 0 0 chr17 71806935 71807017 -17697536 - MLT1F1 LTR MaLR -3 539 458 * 1243 179 0 18 chr17 71807016 71807234 -17697319 - AluJb SINE Alu -12 300 87 1335 221 138 9 chr17 71807234 71807680 -17696873 - MLT1F1 LTR MaLR -74 493 1 303 244 13 0 chr17 71807781 71807859 -17696694 - L1ME3 LINE L1 -3 6159 6081 1683 189 7 3 chr17 71807971 71808268 -17696285 + AluJb SINE Alu 1 298 -14 1526 235 112 20 chr17 71808270 71808805 -17695748 - MLT1E LTR MaLR 0 593 2 1972 147 3 7 chr17 71808938 71809238 -17695315 - AluSx SINE Alu -13 299 1 1588 194 108 6 chr17 71809387 71809712 -17694841 + MLT1F1 LTR MaLR 8 365 -202 716 143 118 0 chr17 71810089 71810208 -17694345 + FLAM_C SINE Alu 1 133 0 2120 113 10 3 chr17 71810833 71811133 -17693420 - AluSx SINE Alu -10 302 1 25 0 0 0 chr17 71811674 71811699 -17692854 + AT_rich Low_complexity Low_complexity 1 25 0 213 121 0 0 chr17 71812264 71812297 -17692256 + (T)n Simple_repeat Simple_repeat 1 33 0 309 329 85 41 chr17 71812407 71812509 -17692044 + L3 LINE CR1 1191 1287 -290 1803 127 93 34 chr17 71812509 71812863 -17691690 + THE1C LTR MaLR 1 375 0 309 329 85 41 chr17 71812863 71813076 -17691477 + L3 LINE CR1 1287 1520 -57 190 289 137 61 chr17 71814136 71814333 -17690220 - L2 LINE L2 -2 3311 3100 188 400 9 0 chr17 71814653 71814768 -17689785 - L2 LINE L2 -639 2675 2560 326 287 0 89 chr17 71815084 71815146 -17689407 - MIR3 SINE MIR 0 208 142 2354 92 0 22 chr17 71815146 71815462 -17689091 + AluSg1 SINE Alu 1 309 0 326 287 0 89 chr17 71815462 71815556 -17688997 - MIR3 SINE MIR -66 142 66 2617 163 72 10 chr17 71817493 71818009 -17686544 + L1MB3 LINE L1 5617 6164 -19 261 184 36 0 chr17 71818015 71818183 -17686370 + (TA)n Simple_repeat Simple_repeat 2 175 0 2227 117 10 0 chr17 71818528 71818837 -17685716 - AluSx SINE Alu 0 312 1 3015 148 83 12 chr17 71818963 71819543 -17685010 - L1MC2 LINE L1 0 6344 5724 710 253 65 16 chr17 71819658 71819903 -17684650 + MER33 DNA MER1_type 1 257 -67 664 114 9 9 chr17 71819903 71820017 -17684536 + (TTCC)n Simple_repeat Simple_repeat 1 114 0 2091 147 0 0 chr17 71820017 71820324 -17684229 - AluSx SINE Alu -5 307 1 302 228 38 0 chr17 71820324 71820403 -17684150 + MER33 DNA MER1_type 242 323 -1 292 352 9 0 chr17 71820456 71820564 -17683989 - L2 LINE L2 -6 3307 3199 2202 106 0 0 chr17 71820645 71820929 -17683624 + AluSg SINE Alu 1 284 -26 285 300 67 0 chr17 71821006 71821126 -17683427 + MIR SINE MIR 45 172 -90 204 67 0 0 chr17 71822418 71822448 -17682105 + (T)n Simple_repeat Simple_repeat 1 30 0 1995 146 3 0 chr17 71823978 71824265 -17680288 + AluSx SINE Alu 1 288 -24 356 335 77 0 chr17 71824871 71825119 -17679434 + L1ME3A LINE L1 4870 5136 -1010 2149 235 116 25 chr17 71825141 71825232 -17679321 + L1ME3A LINE L1 5184 5265 -905 2272 94 7 7 chr17 71825232 71825529 -17679024 + AluSq SINE Alu 1 297 -16 2149 235 116 25 chr17 71825529 71826333 -17678220 + L1ME3A LINE L1 5265 6164 -6 22 35 0 0 chr17 71826396 71826425 -17678128 + AT_rich Low_complexity Low_complexity 1 29 0 185 228 193 0 chr17 71826780 71826837 -17677716 + MIR SINE MIR 38 105 -103 2081 141 0 0 chr17 71828130 71828434 -17676119 + AluSx SINE Alu 1 304 -8 1247 183 45 0 chr17 71828511 71828735 -17675818 - AluJo SINE Alu -78 234 1 26 30 0 0 chr17 71828751 71828784 -17675769 + AT_rich Low_complexity Low_complexity 1 33 0 643 165 25 25 chr17 71829790 71829911 -17674642 + FLAM_A SINE Alu 2 122 -11 24 0 0 0 chr17 71829913 71829937 -17674616 + AT_rich Low_complexity Low_complexity 1 24 0 483 224 21 35 chr17 71830287 71830430 -17674123 + MIR SINE MIR 89 229 -33 364 229 24 0 chr17 71830442 71830525 -17674028 - Tigger7 DNA MER2_type 0 2487 2403 900 159 145 42 chr17 71830527 71830741 -17673812 + MER46A DNA MER2_type 1 236 0 * 2125 215 64 27 chr17 71830741 71831242 -17673311 - Tigger7 DNA MER2_type -80 2507 2026 2257 96 7 3 chr17 71831242 71831535 -17673018 + AluSq SINE Alu 1 294 -19 2125 215 64 27 chr17 71831535 71831633 -17672920 - Tigger7 DNA MER2_type -561 2026 2 2253 101 3 0 chr17 71831780 71832068 -17672485 + AluSg SINE Alu 1 289 -21 1968 128 20 3 chr17 71832819 71833115 -17671438 - AluJb SINE Alu -11 301 1 234 0 0 0 chr17 71834081 71834107 -17670446 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 494 286 112 5 chr17 71835389 71835585 -17668968 - MIR SINE MIR -11 251 35 741 236 22 76 chr17 71836568 71836843 -17667710 - L1ME3A LINE L1 -10 6160 5901 1145 208 12 17 chr17 71837142 71837382 -17667171 - MER58B DNA MER1_type -9 332 94 2421 93 0 0 chr17 71837409 71837720 -17666833 - AluY SINE Alu 0 311 1 277 209 81 0 chr17 71837817 71837903 -17666650 + MIR SINE MIR 57 149 -113 378 143 57 0 chr17 71838209 71838279 -17666274 - Tigger4(Zombi) DNA MER2_type 0 2731 2658 2521 104 22 0 chr17 71838281 71838637 -17665916 + THE1B LTR MaLR 1 364 0 750 244 80 13 chr17 71838852 71839077 -17665476 + MIR SINE MIR 23 262 0 1196 193 58 120 chr17 71840088 71840153 -17664400 - MLT1C LTR MaLR -4 463 396 2159 113 0 22 chr17 71840153 71840471 -17664082 - AluSx SINE Alu -1 311 1 1196 193 58 120 chr17 71840471 71840814 -17663739 - MLT1C LTR MaLR -71 396 83 2416 171 35 91 chr17 71840814 71841462 -17663091 - LTR9 LTR ERV1 0 612 1 1196 193 58 120 chr17 71841462 71841502 -17663051 - MLT1C LTR MaLR -384 83 42 245 314 65 0 chr17 71843287 71843440 -17661113 - L1ME3A LINE L1 -205 5965 5803 234 135 19 154 chr17 71843516 71843620 -17660933 + L1MC4 LINE L1 6614 6703 -1339 186 133 0 0 chr17 71843622 71843652 -17660901 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 310 307 0 0 chr17 71843655 71843743 -17660810 - L1MC4 LINE L1 -1340 6702 6615 296 207 0 24 chr17 71843744 71843826 -17660727 + (TATATG)n Simple_repeat Simple_repeat 6 85 0 270 82 0 0 chr17 71843830 71843879 -17660674 + LTR66 LTR ERVL 394 442 -168 564 280 94 31 chr17 71843926 71844378 -17660175 - L1ME3A LINE L1 -482 5639 5194 2076 120 20 3 chr17 71844579 71844878 -17659675 - AluSq SINE Alu -3 310 7 404 326 87 14 chr17 71845174 71845521 -17659032 - L1ME4a LINE L1 -81 6040 5669 2197 128 12 0 chr17 71845724 71846053 -17658500 - MER1B DNA MER1_type 0 337 5 2275 102 0 3 chr17 71846512 71846805 -17657748 + AluSx SINE Alu 3 294 -18 398 213 21 0 chr17 71846934 71847028 -17657525 + MIR SINE MIR 46 141 -121 1716 192 0 19 chr17 71847094 71847402 -17657151 - AluJb SINE Alu -10 302 1 2109 125 38 0 chr17 71848016 71848305 -17656248 + AluSx SINE Alu 1 300 -12 2402 98 3 0 chr17 71848727 71849033 -17655520 - AluSg SINE Alu -3 307 1 584 264 113 72 chr17 71849096 71849578 -17654975 - MLT1J LTR MaLR -7 459 3 2286 99 0 3 chr17 71849745 71850038 -17654515 + AluSq SINE Alu 1 292 -21 873 231 92 32 chr17 71850836 71851087 -17653466 - MLT1C LTR MaLR 0 467 202 763 248 0 0 chr17 71851130 71851275 -17653278 - FRAM SINE Alu -31 145 1 372 248 27 53 chr17 71851319 71851393 -17653160 - MLT1C LTR MaLR -349 156 82 2258 86 36 7 chr17 71851393 71851695 -17652858 - AluY SINE Alu 0 311 1 372 248 27 53 chr17 71851695 71851789 -17652764 - MLT1C LTR MaLR -423 82 1 38598 29 32 2 chr17 71852523 71858539 -17646014 - L1HS LINE L1 0 6155 1 1788 173 30 12 chr17 71858709 71859045 -17645508 + MER61A LTR ERV1 2 343 0 2315 196 15 9 chr17 71859530 71859984 -17644569 - L1MB3 LINE L1 0 6183 5727 3263 182 92 20 chr17 71861338 71862041 -17642512 + L1MB8 LINE L1 5425 6178 0 2251 110 0 13 chr17 71862051 71862350 -17642203 + AluSc SINE Alu 1 295 -14 193 374 11 0 chr17 71864581 71864672 -17639881 + MER5A DNA MER1_type 63 154 -35 372 219 44 51 chr17 71864682 71864819 -17639734 + L1MC5 LINE L1 7782 7917 -44 210 255 0 39 chr17 71865603 71865654 -17638899 + polypurine Low_complexity Low_complexity 1 49 0 2882 198 131 33 chr17 71865777 71866526 -17638027 - MER21B LTR ERV1 -1 862 41 1761 174 57 27 chr17 71866526 71866860 -17637693 - LTR10B LTR ERV1 0 547 204 472 147 42 21 chr17 71866866 71866961 -17637592 - LTR10B LTR ERV1 -450 97 1 300 290 11 21 chr17 71867007 71867100 -17637453 - MER21B LTR ERV1 -771 92 1 4308 192 37 5 chr17 71867119 71867978 -17636575 - L1MB7 LINE L1 -11 6173 5287 2321 122 0 0 chr17 71868040 71868343 -17636210 + AluSq SINE Alu 1 303 -10 1432 184 38 81 chr17 71869368 71869721 -17634832 - MLT1C LTR MaLR -3 464 130 1975 141 16 26 chr17 71869721 71870033 -17634520 - AluSx SINE Alu -3 309 1 1432 184 38 81 chr17 71870033 71870098 -17634455 - MLT1C LTR MaLR -337 130 64 284 292 35 18 chr17 71870506 71870619 -17633934 + MIR SINE MIR 65 179 -83 860 240 81 81 chr17 71870805 71871310 -17633243 - MLT1J LTR MaLR -2 509 5 280 279 23 23 chr17 71872411 71872497 -17632056 - L2 LINE L2 -1 3271 3186 2233 120 7 0 chr17 71874015 71874315 -17630238 + AluSq SINE Alu 1 302 -11 189 107 0 0 chr17 71874791 71874819 -17629734 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 293 316 45 34 chr17 71876402 71876579 -17627974 - MLT1J LTR MaLR -331 180 2 1325 200 56 18 chr17 71877862 71878147 -17626406 + AluJo SINE Alu 1 296 -16 2250 112 29 9 chr17 71878567 71878915 -17625638 - THE1A LTR MaLR 0 355 1 456 314 124 44 chr17 71879486 71879849 -17624704 - L2 LINE L2 0 3313 2922 180 143 0 48 chr17 71880050 71880092 -17624461 - L2 LINE L2 -557 2757 2718 377 153 0 0 chr17 71880399 71880458 -17624095 - MER3 DNA MER1_type -1 208 150 1937 112 52 4 chr17 71880461 71880769 -17623784 + AluSx SINE Alu 1 321 0 502 257 92 7 chr17 71880804 71880956 -17623597 - MER3 DNA MER1_type -44 165 1 237 312 46 28 chr17 71881731 71881840 -17622713 + MIR SINE MIR 36 146 -116 1837 159 30 17 chr17 71882134 71882297 -17622256 - AluSx SINE Alu -7 305 135 2382 82 0 29 chr17 71882297 71882612 -17621941 - AluY SINE Alu -5 306 1 1837 159 30 17 chr17 71882612 71882749 -17621804 - AluSx SINE Alu -177 135 1 601 288 66 16 chr17 71884146 71884403 -17620150 + L1ME1 LINE L1 5605 5874 -247 2385 85 3 7 chr17 71884688 71884995 -17619558 + AluSp SINE Alu 1 306 -7 322 235 26 43 chr17 71885650 71885765 -17618788 + L1ME1 LINE L1 5953 6065 -101 737 211 74 10 chr17 71885766 71886002 -17618551 + L1MD3 LINE L1 6110 7980 -10 519 239 126 18 chr17 71886481 71886648 -17617905 + MLT1I LTR MaLR 195 379 -30 554 271 66 10 chr17 71886851 71887144 -17617409 + MLT1I LTR MaLR 27 394 -15 193 256 0 0 chr17 71887198 71887241 -17617312 + L2 LINE L2 3218 3260 -12 1122 139 0 0 chr17 71887367 71887525 -17617028 - FAM SINE Alu -17 158 1 1415 75 60 0 chr17 71887591 71887790 -17616763 + L1MA1 LINE L1 6092 6302 0 1496 168 0 0 chr17 71888308 71888569 -17615984 - AluJo SINE Alu 0 314 54 476 340 0 0 chr17 71888585 71888776 -17615777 - L1MC4a LINE L1 -1878 5930 5740 908 162 76 0 chr17 71891710 71891907 -17612646 + L1MD3 LINE L1 7784 7995 0 184 226 0 81 chr17 71892034 71892096 -17612457 - MIR3 SINE MIR -50 158 102 229 310 69 0 chr17 71892727 71892814 -17611739 - MIR SINE MIR -93 115 23 692 202 37 53 chr17 71893665 71893853 -17610700 - MER5A DNA MER1_type 0 189 5 961 199 62 0 chr17 71893865 71894041 -17610512 - MER58A DNA MER1_type 0 224 38 261 180 0 0 chr17 71894052 71894102 -17610451 + (TA)n Simple_repeat Simple_repeat 2 51 0 424 240 30 0 chr17 71894213 71894313 -17610240 + U6 snRNA snRNA 1 103 -4 2013 87 8 0 chr17 71894545 71894799 -17609754 + AluY SINE Alu 37 292 -19 332 258 45 45 chr17 71894996 71895128 -17609425 + L2 LINE L2 2332 2463 -851 526 101 152 0 chr17 71895211 71895290 -17609263 + 5S rRNA rRNA 1 91 -30 2251 120 0 0 chr17 71895330 71895630 -17608923 - AluSx SINE Alu -12 300 1 2165 113 13 7 chr17 71895657 71895957 -17608596 + AluSx SINE Alu 1 302 -10 701 271 61 26 chr17 71896025 71896254 -17608299 - MIR SINE MIR -25 237 1 2204 88 14 0 chr17 71896821 71897105 -17607448 + AluSx SINE Alu 1 288 -24 2470 75 0 0 chr17 71898077 71898371 -17606182 - AluY SINE Alu -17 294 1 2065 99 11 3 chr17 71898728 71899012 -17605541 + AluSq SINE Alu 26 311 -2 912 191 6 6 chr17 71900786 71900948 -17603605 + FRAM SINE Alu 1 162 -4 570 260 128 0 chr17 71901912 71902116 -17602437 - MIR SINE MIR -24 238 9 24 0 0 0 chr17 71903861 71903885 -17600668 + AT_rich Low_complexity Low_complexity 1 24 0 1399 183 31 93 chr17 71903885 71904241 -17600312 - MLT1A1 LTR MaLR 0 365 32 468 247 102 18 chr17 71904270 71904436 -17600117 - MIR SINE MIR -11 251 72 601 167 14 58 chr17 71904608 71904746 -17599807 - L1MD3 LINE L1 -13 7982 7851 2222 114 0 16 chr17 71904753 71905070 -17599483 + AluSx SINE Alu 1 312 0 468 255 52 92 chr17 71905293 71905544 -17599009 - MIR SINE MIR -3 259 19 213 59 29 0 chr17 71907885 71907919 -17596634 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 2131 128 0 0 chr17 71907919 71908201 -17596352 - AluSx SINE Alu -30 282 1 608 225 152 65 chr17 71908201 71908477 -17596076 + L1MC4 LINE L1 7599 7898 -144 1581 188 11 0 chr17 71909254 71909541 -17595012 + AluJo SINE Alu 1 290 -22 290 264 67 140 chr17 71910261 71910439 -17594114 - MIR SINE MIR -6 256 92 227 254 94 72 chr17 71911480 71911618 -17592935 + L2 LINE L2 3117 3257 -56 1492 109 60 53 chr17 71913912 71914140 -17590413 - THE1C LTR MaLR 0 375 99 2109 87 0 24 chr17 71914140 71914468 -17590085 + AluSq SINE Alu 1 321 0 1492 109 60 53 chr17 71914468 71914568 -17589985 - THE1C LTR MaLR -276 99 1 215 314 0 0 chr17 71914577 71914628 -17589925 + MIR SINE MIR 29 79 -183 307 276 32 49 chr17 71914957 71915080 -17589473 + MIR3 SINE MIR 75 195 -13 1228 158 31 107 chr17 71915377 71915694 -17588859 + AluJo SINE Alu 1 293 -19 3271 196 63 29 chr17 71915708 71916422 -17588131 - LTR39 LTR ERV1 0 783 46 2190 53 0 66 chr17 71916550 71916854 -17587699 + AluY SINE Alu 1 284 -27 201 39 0 0 chr17 71916854 71916880 -17587673 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 239 228 35 18 chr17 71917177 71917234 -17587319 - MLT1K LTR MaLR -344 244 187 2025 125 0 0 chr17 71919815 71920110 -17584443 - AluSx SINE Alu -17 295 1 1352 175 65 10 chr17 71920590 71920882 -17583671 - AluJo SINE Alu -4 308 1 282 315 56 9 chr17 71920918 71921026 -17583527 + L2 LINE L2 3178 3290 -23 492 265 160 6 chr17 71921084 71921265 -17583288 - MIR SINE MIR -10 252 44 319 248 9 97 chr17 71921567 71921680 -17582873 + MER5A DNA MER1_type 80 182 -7 194 258 208 63 chr17 71922933 71923092 -17581461 - MIR3 SINE MIR -21 187 6 2523 85 68 8 chr17 71923235 71923589 -17580964 - THE1C LTR MaLR 0 375 1 1831 153 7 3 chr17 71924763 71925058 -17579495 + AluJo SINE Alu 1 296 -16 419 311 106 46 chr17 71925332 71925560 -17578993 + HAL1b LINE L1 77 290 -1058 2085 102 0 7 chr17 71925560 71925854 -17578699 + AluSx SINE Alu 1 292 -20 419 311 106 46 chr17 71925854 71926230 -17578323 + HAL1b LINE L1 290 717 -631 1645 161 16 31 chr17 71926522 71926839 -17577714 + AluJb SINE Alu 1 312 0 2093 112 3 3 chr17 71926872 71927176 -17577377 + AluSg SINE Alu 1 304 -6 529 266 141 21 chr17 71927264 71927456 -17577097 + MIR SINE MIR 18 232 -30 450 298 153 48 chr17 71927832 71928309 -17576244 + L1ME4a LINE L1 4877 5403 -743 381 298 44 6 chr17 71928555 71928736 -17575817 + L1ME4a LINE L1 5653 5840 -281 355 282 66 61 chr17 71928785 71928966 -17575587 + L1ME4a LINE L1 5939 6120 -1 1541 180 58 13 chr17 71931048 71931359 -17573194 - MLT1A1 LTR MaLR -40 325 1 978 238 14 22 chr17 71932969 71933018 -17571535 + MER58A DNA MER1_type 3 51 -2369 1764 145 3 3 chr17 71933018 71933322 -17571231 - AluSx SINE Alu 0 304 1 978 238 14 22 chr17 71933322 71933494 -17571059 + MER58A DNA MER1_type 51 223 -1 589 315 35 0 chr17 71933545 71933745 -17570808 + MIR SINE MIR 10 216 -46 708 184 7 21 chr17 71933771 71933912 -17570641 - L1MB7 LINE L1 -19 6165 6027 968 208 27 45 chr17 71933923 71934371 -17570182 + MLT1D LTR MaLR 1 501 -4 2375 62 3 3 chr17 71935117 71935422 -17569131 - AluY SINE Alu -6 305 1 367 245 105 28 chr17 71935765 71935907 -17568646 + MIR SINE MIR 38 188 -68 2042 128 0 0 chr17 71936889 71937187 -17567366 + AluSx SINE Alu 1 298 -14 839 266 120 0 chr17 71937457 71937690 -17566863 - MIR SINE MIR 0 262 2 207 0 0 0 chr17 71938649 71938672 -17565881 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1247 195 139 44 chr17 71938841 71939251 -17565302 - MER113 DNA MER1_type? -2 519 71 207 304 18 0 chr17 71939253 71939309 -17565244 - MER5A DNA MER1_type -132 57 1 732 220 30 6 chr17 71939323 71939491 -17565062 + MER5B DNA MER1_type 1 172 -6 1752 126 0 0 chr17 71939562 71939816 -17564737 - AluSx SINE Alu -32 280 27 629 267 175 0 chr17 71940149 71940355 -17564198 - MIR SINE MIR 0 262 21 355 338 27 27 chr17 71941140 71941288 -17563265 - MIR SINE MIR -50 212 65 517 152 355 0 chr17 71941798 71941936 -17562617 - MER5A DNA MER1_type -2 187 1 213 317 176 28 chr17 71942219 71942361 -17562192 + MER5A DNA MER1_type 4 166 -23 * 605 196 157 13 chr17 71942236 71942389 -17562164 - MER5A DNA MER1_type -6 183 9 371 202 150 121 chr17 71942405 71942578 -17561975 + MER5B DNA MER1_type 1 178 0 405 259 180 7 chr17 71942687 71942820 -17561733 - MER5A DNA MER1_type -32 157 11 210 309 53 21 chr17 71943648 71943742 -17560811 - L2 LINE L2 -209 3063 2967 1045 243 28 5 chr17 71943868 71944086 -17560467 - MER58A DNA MER1_type -1 223 1 1710 168 7 10 chr17 71944463 71944766 -17559787 + AluJb SINE Alu 1 302 -10 252 254 14 14 chr17 71945573 71945644 -17558909 + CT-rich Low_complexity Low_complexity 5 75 0 641 254 9 51 chr17 71946266 71946483 -17558070 - Charlie8 DNA MER1_type -2138 279 72 2048 123 17 0 chr17 71946493 71946795 -17557758 + AluSx SINE Alu 1 307 -5 1354 193 37 27 chr17 71946806 71947101 -17557452 + AluSx SINE Alu 3 300 -12 34 65 0 0 chr17 71947203 71947265 -17557288 + AT_rich Low_complexity Low_complexity 1 62 0 232 180 40 20 chr17 71949352 71949402 -17555151 - L2 LINE L2 -70 3243 3193 1184 193 28 0 chr17 71949633 71949845 -17554708 - MER58A DNA MER1_type -6 218 1 189 309 238 0 chr17 71949861 71949945 -17554608 + MIR SINE MIR 48 151 -111 2262 85 3 3 chr17 71950144 71950450 -17554103 + AluSg1 SINE Alu 1 306 -3 216 0 0 0 chr17 71950710 71950734 -17553819 + (A)n Simple_repeat Simple_repeat 1 24 0 407 324 9 0 chr17 71952125 71952233 -17552320 + MIR SINE MIR 4 112 -150 896 272 5 5 chr17 71952278 71952491 -17552062 + MIR SINE MIR 49 261 -1 5824 205 131 31 chr17 71953219 71954635 -17549918 + L1MA9 LINE L1 5 1572 -4569 1711 155 10 26 chr17 71954635 71954939 -17549614 + AluSx SINE Alu 3 301 -11 5824 205 131 31 chr17 71954939 71954978 -17549575 + L1MA9 LINE L1 1572 1606 -4535 1023 172 11 6 chr17 71954995 71955169 -17549384 + FAM SINE Alu 1 175 0 1879 175 27 3 chr17 71955169 71955540 -17549013 + L1MA9 LINE L1 3243 3622 -2588 1372 127 56 0 chr17 71955541 71955754 -17548799 - AluJo SINE Alu -23 289 65 9267 164 21 25 chr17 71955807 71958040 -17546513 + L1MA9 LINE L1 3610 5843 -533 189 195 0 0 chr17 71958071 71958112 -17546441 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 2322 132 72 45 chr17 71958154 71958668 -17545885 + L1MA9 LINE L1 5840 6367 -9 5652 131 126 21 chr17 71958664 71959454 -17545099 - Tigger3b DNA MER2_type -1817 1211 273 2041 131 0 3 chr17 71959454 71959760 -17544793 + AluSx SINE Alu 1 305 -7 5652 131 126 21 chr17 71959760 71960064 -17544489 - Tigger3b DNA MER2_type -2755 273 2 357 227 193 8 chr17 71961991 71962110 -17542443 + MER5A DNA MER1_type 49 189 0 1132 221 82 52 chr17 71962220 71962296 -17542257 + MER58B DNA MER1_type 2 74 -2346 2245 60 17 27 chr17 71962296 71962594 -17541959 + AluY SINE Alu 1 295 -16 1132 221 82 52 chr17 71962594 71962847 -17541706 + MER58B DNA MER1_type 74 341 0 192 304 0 0 chr17 71963582 71963628 -17540925 - L2 LINE L2 -28 3285 3240 233 342 189 0 chr17 71964646 71964757 -17539796 + L3 LINE CR1 1433 1564 -13 2153 116 10 0 chr17 71965241 71965551 -17539002 - AluSq SINE Alu 0 313 1 2065 88 0 44 chr17 71966691 71967023 -17537530 + AluSx SINE Alu 2 320 0 797 226 15 41 chr17 71968643 71968838 -17535715 + MIR SINE MIR 38 227 -35 2139 117 0 0 chr17 71968992 71969292 -17535261 - AluSg SINE Alu -10 300 1 237 218 51 39 chr17 71970652 71970730 -17533823 - MIR SINE MIR -63 145 67 848 230 47 9 chr17 71973123 71973336 -17531217 + MER58A DNA MER1_type 1 221 -3 263 316 103 35 chr17 71973343 71973517 -17531036 + MIR3 SINE MIR 16 201 -7 244 336 94 0 chr17 71973639 71973767 -17530786 + MIR3 SINE MIR 62 201 -7 1024 224 37 0 chr17 71974038 71974252 -17530301 - MLT1A1 LTR MaLR 0 365 144 508 174 0 0 chr17 71974260 71974346 -17530207 - FRAM SINE Alu -17 159 74 235 258 0 21 chr17 72024362 72024455 -17480098 + C-rich Low_complexity Low_complexity 3 93 0 * 299 222 12 12 chr17 72024442 72024523 -17480030 + (CTG)n Simple_repeat Simple_repeat 2 82 0 1473 59 0 2 chr17 72024524 72025054 -17479499 + (TGG)n Simple_repeat Simple_repeat 1 529 0 1284 89 0 0 chr17 72025072 72025252 -17479301 + (TGG)n Simple_repeat Simple_repeat 1 180 0 675 205 123 10 chr17 72026786 72026981 -17477572 - MER20 DNA MER1_type -2 217 1 2072 138 3 0 chr17 72027493 72027790 -17476763 + AluJb SINE Alu 1 298 -14 1298 99 0 0 chr17 72027933 72028095 -17476458 + AluSg/x SINE Alu 135 296 -14 237 319 0 0 chr17 72028240 72028309 -17476244 - MIR SINE MIR -72 190 122 186 103 0 0 chr17 72033859 72033888 -17470665 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2246 96 7 0 chr17 72034258 72034563 -17469990 - AluSq SINE Alu 0 307 1 252 0 0 0 chr17 72036452 72036480 -17468073 + (T)n Simple_repeat Simple_repeat 1 28 0 327 282 82 0 chr17 72036552 72036662 -17467891 - L2 LINE L2 -1 3271 3153 879 245 0 0 chr17 72036975 72037163 -17467390 + AluJb SINE Alu 119 306 -6 818 222 24 14 chr17 72038057 72038269 -17466284 + MER20 DNA MER1_type 5 218 -1 375 41 0 0 chr17 72038500 72038549 -17466004 + (TC)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr17 72038548 72038571 -17465982 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 491 254 48 8 chr17 72038582 72038708 -17465845 + L2 LINE L2 3183 3313 0 363 226 0 0 chr17 72039375 72039477 -17465076 + (CA)n Simple_repeat Simple_repeat 1 102 0 437 223 51 76 chr17 72039486 72039643 -17464910 - MIR SINE MIR -11 251 99 385 302 56 0 chr17 72039858 72039984 -17464569 - MIR SINE MIR -70 192 60 2091 121 36 39 chr17 72040752 72041116 -17463437 - THE1B LTR MaLR -1 363 1 2280 113 0 0 chr17 72041220 72041513 -17463040 - AluSg SINE Alu -17 293 1 308 292 38 16 chr17 72041921 72042075 -17462478 - L1ME LINE L1 -345 5776 5616 2436 56 52 0 chr17 72042075 72042363 -17462190 - AluY SINE Alu -8 303 1 308 292 38 16 chr17 72042363 72042393 -17462160 - L1ME LINE L1 -505 5616 5588 1923 160 0 41 chr17 72042394 72042426 -17462127 - AluSx SINE Alu -6 306 274 195 42 0 0 chr17 72042426 72042450 -17462103 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1923 160 0 41 chr17 72042450 72042736 -17461817 - AluSx SINE Alu -38 274 1 189 146 21 62 chr17 72042841 72042889 -17461664 - L2 LINE L2 -1 3312 3267 1627 166 37 96 chr17 72043033 72043492 -17461061 + MSTB1 LTR MaLR 1 432 0 1102 207 73 4 chr17 72043494 72043769 -17460784 + MLT-int LTR MaLR 2 295 -1440 2536 200 61 48 chr17 72043878 72044287 -17460266 + MSTB2-int LTR MaLR 933 1348 -303 2486 75 7 0 chr17 72044287 72044582 -17459971 + AluY SINE Alu 1 297 -14 2536 200 61 48 chr17 72044582 72044890 -17459663 + MSTB2-int LTR MaLR 1348 1651 0 2219 155 91 2 chr17 72044890 72045310 -17459243 + MSTB2 LTR MaLR 1 457 0 21 36 0 0 chr17 72095771 72095799 -17408754 + AT_rich Low_complexity Low_complexity 1 28 0 373 216 233 0 chr17 72096371 72096487 -17408066 + MER103 DNA DNA 3 145 -21 518 267 119 10 chr17 72096617 72096836 -17407717 + MIR SINE MIR 20 262 0 698 216 0 0 chr17 72096885 72097024 -17407529 - MSTB2 LTR MaLR 0 457 319 275 244 0 11 chr17 72097781 72097871 -17406682 + CT-rich Low_complexity Low_complexity 1 89 0 532 231 134 0 chr17 72098136 72098270 -17406283 + MIR SINE MIR 1 152 -110 1238 264 22 39 chr17 72098291 72098707 -17405846 + L1M4c LINE L1 1413 1821 -4563 1483 87 44 10 chr17 72098709 72098915 -17405638 - MER30 DNA MER1_type 0 230 18 216 97 0 0 chr17 72098980 72099011 -17405542 + (CA)n Simple_repeat Simple_repeat 1 31 0 327 241 0 69 chr17 72099062 72099178 -17405375 + L1M4c LINE L1 2041 2148 -4415 320 204 143 71 chr17 72099284 72099382 -17405171 - MIR SINE MIR -22 240 136 * 403 252 19 0 chr17 72099380 72099483 -17405070 + MIR SINE MIR 147 251 -11 227 210 210 30 chr17 72100446 72100613 -17403940 - L1ME4a LINE L1 -159 6757 6561 267 252 144 9 chr17 72100710 72100821 -17403732 - L1ME4a LINE L1 -515 6444 6319 423 0 0 0 chr17 72100857 72100904 -17403649 + (TG)n Simple_repeat Simple_repeat 2 48 0 552 249 51 4 chr17 72100942 72101179 -17403374 - L1ME4a LINE L1 -2969 3972 3725 2039 127 0 0 chr17 72101305 72101631 -17402922 - AluSx SINE Alu 0 312 1 562 312 39 25 chr17 72101651 72101936 -17402617 - L1ME4a LINE L1 -4584 2538 2250 258 205 28 3 chr17 72101935 72102006 -17402547 - L1ME LINE L1 -5080 1343 1283 * 282 280 119 54 chr17 72102420 72102588 -17401965 - L1ME LINE L1 -5891 1040 862 367 338 81 14 chr17 72102591 72102801 -17401752 - L1M4 LINE L1 -1327 4819 4596 718 165 17 0 chr17 72102905 72103020 -17401533 - FLAM_C SINE Alu -21 122 6 2320 64 0 39 chr17 72103594 72103905 -17400648 - AluY SINE Alu -12 299 1 338 281 36 71 chr17 72103906 72104130 -17400423 + L1ME LINE L1 5574 5789 -332 963 236 127 27 chr17 72104338 72104743 -17399810 + LTR33A LTR ERVL 46 517 -4 245 335 114 19 chr17 72104749 72104907 -17399646 - MIR SINE MIR 0 262 90 385 222 200 0 chr17 72104940 72105030 -17399523 + MIR SINE MIR 20 127 -135 935 141 43 6 chr17 72105030 72105193 -17399360 - L1MB5 LINE L1 -107 6067 5899 1610 111 47 47 chr17 72105193 72105491 -17399062 + MLT1C LTR MaLR 1 298 -169 246 128 0 0 chr17 72106209 72106248 -17398305 + (TTC)n Simple_repeat Simple_repeat 2 40 0 261 277 109 10 chr17 72106588 72106689 -17397864 + L2 LINE L2 2985 3095 -177 194 260 48 110 chr17 72106747 72106893 -17397660 + L2 LINE L2 3163 3299 -14 189 0 0 0 chr17 72106894 72106915 -17397638 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 1503 172 34 14 chr17 72107791 72108088 -17396465 - AluJo SINE Alu -9 303 1 672 230 123 4 chr17 72108092 72108324 -17396229 - L1ME3 LINE L1 0 6170 5903 1003 281 24 4 chr17 72109076 72109329 -17395224 + MIR SINE MIR 4 261 -1 1282 194 4 0 chr17 72109329 72109561 -17394992 + AluJo SINE Alu 1 233 -79 267 231 0 0 chr17 72109561 72109613 -17394940 + LTR30 LTR ERV1 1 52 -670 1395 137 95 73 chr17 72109613 72109989 -17394564 + LTR12 LTR ERV1 55 2032 -406 255 214 56 22 chr17 72109989 72110078 -17394475 + LTR30 LTR ERV1 552 643 -79 625 180 0 0 chr17 72110080 72110180 -17394373 + LTR12 LTR ERV1 615 714 0 387 153 0 0 chr17 72110180 72110239 -17394314 + AluJo SINE Alu 230 288 -14 223 328 29 58 chr17 72110729 72110903 -17393650 + L3b LINE CR1 1212 1380 -203 186 171 0 0 chr17 72111185 72111226 -17393327 + T-rich Low_complexity Low_complexity 1 41 0 2336 106 13 0 chr17 72111266 72111567 -17392986 + AluSx SINE Alu 1 305 -7 2484 81 0 19 chr17 72112131 72112439 -17392114 + AluSg SINE Alu 1 302 -8 258 216 93 31 chr17 72112561 72112658 -17391895 - L1ME4a LINE L1 -54 6067 5965 218 200 0 22 chr17 72112947 72112992 -17391561 + GA-rich Low_complexity Low_complexity 3 46 0 549 339 49 4 chr17 72113836 72114081 -17390472 - MIR SINE MIR -3 259 4 601 239 10 78 chr17 72114537 72114748 -17389805 - MIR SINE MIR -33 229 35 355 271 162 29 chr17 72114937 72115147 -17389406 - L2 LINE L2 -565 2749 2512 326 258 54 12 chr17 72115559 72115726 -17388827 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 2072 138 3 0 chr17 72116298 72116595 -17387958 + AluJb SINE Alu 1 298 -14 1298 99 0 0 chr17 72116738 72116900 -17387653 + AluSg/x SINE Alu 137 298 -14 237 319 0 0 chr17 72117045 72117114 -17387439 - MIR SINE MIR -72 190 122 186 103 0 0 chr17 72122664 72122693 -17381860 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2246 96 7 0 chr17 72123063 72123368 -17381185 - AluSq SINE Alu 0 307 1 252 0 0 0 chr17 72125257 72125285 -17379268 + (T)n Simple_repeat Simple_repeat 1 28 0 327 282 82 0 chr17 72125357 72125467 -17379086 - L2 LINE L2 -1 3271 3153 879 245 0 0 chr17 72125780 72125968 -17378585 + AluJb SINE Alu 119 306 -6 818 222 24 14 chr17 72126862 72127074 -17377479 + MER20 DNA MER1_type 5 218 -1 375 41 0 0 chr17 72127305 72127354 -17377199 + (TC)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr17 72127353 72127376 -17377177 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 491 254 48 8 chr17 72127387 72127513 -17377040 + L2 LINE L2 3183 3313 0 363 226 0 0 chr17 72128180 72128282 -17376271 + (CA)n Simple_repeat Simple_repeat 1 102 0 437 223 51 76 chr17 72128291 72128448 -17376105 - MIR SINE MIR -11 251 99 385 302 56 0 chr17 72128663 72128789 -17375764 - MIR SINE MIR -70 192 60 2091 121 36 39 chr17 72129557 72129921 -17374632 - THE1B LTR MaLR -1 363 1 2280 113 0 0 chr17 72130025 72130318 -17374235 - AluSg SINE Alu -17 293 1 308 292 38 16 chr17 72130726 72130880 -17373673 - L1ME LINE L1 -345 5776 5616 2436 56 52 0 chr17 72130880 72131168 -17373385 - AluY SINE Alu -8 303 1 308 292 38 16 chr17 72131168 72131198 -17373355 - L1ME LINE L1 -505 5616 5588 1923 160 0 41 chr17 72131199 72131231 -17373322 - AluSx SINE Alu -6 306 274 195 42 0 0 chr17 72131231 72131255 -17373298 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1923 160 0 41 chr17 72131255 72131541 -17373012 - AluSx SINE Alu -38 274 1 189 146 21 62 chr17 72131646 72131694 -17372859 - L2 LINE L2 -1 3312 3267 1627 166 37 96 chr17 72131838 72132297 -17372256 + MSTB1 LTR MaLR 1 432 0 1102 207 73 4 chr17 72132299 72132574 -17371979 + MLT-int LTR MaLR 2 295 -1440 2536 200 61 48 chr17 72132683 72133092 -17371461 + MSTB2-int LTR MaLR 933 1348 -303 2486 75 7 0 chr17 72133092 72133387 -17371166 + AluY SINE Alu 1 297 -14 2536 200 61 48 chr17 72133387 72133695 -17370858 + MSTB2-int LTR MaLR 1348 1651 0 2219 155 91 2 chr17 72133695 72134115 -17370438 + MSTB2 LTR MaLR 1 457 0 829 241 40 50 chr17 72134567 72134845 -17369708 + L1ME LINE L1 5425 5699 -422 449 191 95 0 chr17 72135025 72135151 -17369402 - L1MD3 LINE L1 -10 7985 7848 1298 96 0 28 chr17 72135165 72135343 -17369210 - AluSg/x SINE Alu -17 295 123 290 167 0 0 chr17 72135372 72135426 -17369127 - L1MD3 LINE L1 -158 7837 7784 252 0 0 0 chr17 72135444 72135472 -17369081 + (TG)n Simple_repeat Simple_repeat 1 28 0 868 190 98 15 chr17 72135480 72135685 -17368868 - L1MD2 LINE L1 -243 6116 5895 400 284 115 22 chr17 72136108 72136291 -17368262 + MLT1L LTR MaLR 48 247 -368 235 304 98 9 chr17 72136792 72136904 -17367649 + MER94 DNA DNA 11 132 -2 915 196 95 6 chr17 72137020 72137199 -17367354 - MER20 DNA MER1_type 0 219 25 639 215 44 25 chr17 72138167 72138325 -17366228 + MER20 DNA MER1_type 1 161 -58 1962 153 7 7 chr17 72138388 72138676 -17365877 + AluJb SINE Alu 12 299 -13 497 326 22 40 chr17 72139319 72139543 -17365010 - MIR SINE MIR -27 235 16 329 0 24 0 chr17 72139932 72139973 -17364580 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5861 17 1 0 chr17 72139973 72140665 -17363888 - L1PA3 LINE L1 -13 6142 5450 3246 170 65 34 chr17 72140833 72141220 -17363333 + L1MB5 LINE L1 5393 5767 -407 198 0 0 0 chr17 72141220 72141242 -17363311 + (CA)n Simple_repeat Simple_repeat 2 23 0 3246 170 65 34 chr17 72141242 72141605 -17362948 + L1MB5 LINE L1 5767 6166 -8 268 139 0 0 chr17 72141852 72141895 -17362658 + MLT1K LTR MaLR 546 588 0 425 152 48 19 chr17 72142057 72142162 -17362391 + L1MB3 LINE L1 6075 6182 -1 367 208 121 47 chr17 72142177 72142326 -17362227 - L1ME4a LINE L1 -2 6119 5960 482 265 35 39 chr17 72142522 72142538 -17362015 - L1ME4a LINE L1 -168 5953 5938 207 0 0 0 chr17 72142538 72142561 -17361992 + (CA)n Simple_repeat Simple_repeat 2 24 0 482 265 35 39 chr17 72142561 72142659 -17361894 - L1ME4a LINE L1 -183 5938 5841 2036 125 41 52 chr17 72142659 72143026 -17361527 - THE1B LTR MaLR -1 363 1 482 265 35 39 chr17 72143026 72143170 -17361383 - L1ME4a LINE L1 -280 5841 5695 494 257 44 0 chr17 72145186 72145322 -17359231 + MIR SINE MIR 93 234 -28 23 0 0 71 chr17 72145342 72145384 -17359169 + AT_rich Low_complexity Low_complexity 1 39 0 431 309 55 39 chr17 72145767 72145948 -17358605 - MLT1I LTR MaLR -87 322 139 282 346 106 9 chr17 72146493 72146729 -17357824 + L2 LINE L2 2770 3024 -248 524 266 14 14 chr17 72146826 72146965 -17357588 - MER45A DNA AcHobo 0 178 40 407 233 38 38 chr17 72146987 72147120 -17357433 - MIR SINE MIR -124 138 6 2476 77 0 13 chr17 72147192 72147502 -17357051 - AluY SINE Alu -5 306 1 193 167 95 0 chr17 72147982 72148024 -17356529 - L2 LINE L2 -2 3311 3266 195 178 22 22 chr17 72148686 72148731 -17355822 - L2 LINE L2 -2 3311 3267 792 222 130 34 chr17 72148858 72149097 -17355456 + MIR SINE MIR 1 262 0 303 28 0 0 chr17 72149105 72149141 -17355412 + (CAT)n Simple_repeat Simple_repeat 2 37 0 21 82 0 0 chr17 72149379 72149428 -17355125 + GC_rich Low_complexity Low_complexity 1 49 0 260 297 11 11 chr17 72151353 72151444 -17353109 + MIR SINE MIR 54 144 -118 248 270 27 54 chr17 72153106 72153180 -17351373 - L2 LINE L2 -2 3311 3240 885 175 0 99 chr17 72153184 72153317 -17351236 - MER20 DNA MER1_type -18 201 97 2329 113 0 0 chr17 72153317 72153619 -17350934 - AluSg SINE Alu -8 302 1 885 175 0 99 chr17 72153619 72153708 -17350845 - MER20 DNA MER1_type -122 97 1 276 300 53 56 chr17 72153708 72154048 -17350505 - L2 LINE L2 -64 3249 2911 203 351 0 13 chr17 72154206 72154283 -17350270 - MIR SINE MIR -89 173 98 412 288 0 9 chr17 72154338 72154449 -17350104 + MIR SINE MIR 21 130 -132 1779 131 9 25 chr17 72155342 72155693 -17348860 - MER4A LTR ERV1 0 664 261 657 101 0 10 chr17 72155693 72155792 -17348761 - MER4A LTR ERV1 -566 98 1 401 234 90 0 chr17 72156022 72156133 -17348420 + MIR3 SINE MIR 34 154 -54 193 333 48 9 chr17 72156610 72156715 -17347838 + MIR SINE MIR 50 158 -104 474 273 8 23 chr17 72156751 72156883 -17347670 - MIR3 SINE MIR -66 142 13 563 232 98 43 chr17 72157432 72157632 -17346921 - MIR SINE MIR -52 210 5 400 283 28 0 chr17 72158715 72158821 -17345732 + MIR SINE MIR 81 189 -73 494 193 88 9 chr17 72159101 72159215 -17345338 - MIR SINE MIR -93 169 47 3729 65 8 6 chr17 72159324 72159833 -17344720 + L1PA8 LINE L1 5662 6171 -1 236 280 53 0 chr17 72159877 72159952 -17344601 + L2 LINE L2 3017 3095 -177 3152 162 39 69 chr17 72160587 72161298 -17343255 - L1MB5 LINE L1 0 6174 5485 328 327 0 10 chr17 72161320 72161424 -17343129 - MIR SINE MIR -113 149 47 2446 100 17 6 chr17 72161654 72162014 -17342539 - THE1B LTR MaLR 0 364 1 267 173 0 0 chr17 72164930 72164982 -17339571 + (CA)n Simple_repeat Simple_repeat 1 52 0 480 316 126 75 chr17 72165205 72165847 -17338706 + L1ME LINE L1 98 772 -5347 444 264 63 81 chr17 72165889 72166173 -17338380 + L1ME LINE L1 3078 3356 -2773 2680 198 14 25 chr17 72166246 72166796 -17337757 + MLT2B3 LTR ERVL 3 546 -8 757 231 202 0 chr17 72166933 72167171 -17337382 - L1ME1 LINE L1 -4 6162 5877 584 152 53 6 chr17 72167203 72167374 -17337179 + CT-rich Low_complexity Low_complexity 2 180 0 702 168 0 0 chr17 72167379 72167486 -17337067 - FLAM_C SINE Alu -36 107 1 2018 209 47 2 chr17 72167486 72167930 -17336623 - L1ME1 LINE L1 -276 5890 5427 239 275 129 57 chr17 72168061 72168410 -17336143 + L1ME LINE L1 3878 4251 -1878 768 257 57 49 chr17 72168445 72168507 -17336046 + L1ME LINE L1 5118 5178 -969 2477 52 10 0 chr17 72168507 72168797 -17335756 + AluY SINE Alu 1 293 -18 768 257 57 49 chr17 72168797 72168808 -17335745 + L1ME LINE L1 5178 5187 -960 2217 87 0 4 chr17 72168808 72169084 -17335469 + AluSq SINE Alu 39 313 0 768 257 57 49 chr17 72169084 72169457 -17335096 + L1ME LINE L1 5187 5576 -571 183 259 99 49 chr17 72169499 72169580 -17334973 - MIR3 SINE MIR -41 167 83 1991 80 102 0 chr17 72169892 72170156 -17334397 - AluSx SINE Alu -21 291 1 463 298 93 26 chr17 72170342 72170666 -17333887 - L1ME LINE L1 -305 5816 5511 1620 128 16 96 chr17 72170676 72170905 -17333648 - L1MD1 LINE L1 0 6242 6051 2367 98 0 3 chr17 72170905 72171202 -17333351 - AluSx SINE Alu -16 296 1 1620 128 16 96 chr17 72171202 72171338 -17333215 - L1MD1 LINE L1 -191 6051 5906 1606 146 97 17 chr17 72171417 72171705 -17332848 - AluJb SINE Alu -1 311 1 1374 161 64 35 chr17 72171740 72172051 -17332502 - MER33 DNA MER1_type 0 324 5 599 247 11 79 chr17 72172137 72172327 -17332226 - MER5B DNA MER1_type -1 177 1 275 244 0 11 chr17 72174176 72174266 -17330287 + CT-rich Low_complexity Low_complexity 1 89 0 537 231 134 0 chr17 72174531 72174665 -17329888 + MIR SINE MIR 1 152 -110 1161 264 22 39 chr17 72174686 72175102 -17329451 + L1M4c LINE L1 1413 1821 -4563 1401 87 44 10 chr17 72175104 72175310 -17329243 - MER30 DNA MER1_type 0 230 18 216 97 0 0 chr17 72175375 72175406 -17329147 + (CA)n Simple_repeat Simple_repeat 1 31 0 332 241 0 69 chr17 72175457 72175573 -17328980 + L1M4c LINE L1 2041 2148 -4415 318 204 143 71 chr17 72175679 72175777 -17328776 - MIR SINE MIR -22 240 136 * 403 252 19 0 chr17 72175775 72175878 -17328675 + MIR SINE MIR 147 251 -11 433 210 210 30 chr17 72176841 72177008 -17327545 - L1ME4a LINE L1 -159 6757 6561 242 252 144 9 chr17 72177105 72177216 -17327337 - L1ME4a LINE L1 -515 6444 6319 423 0 0 0 chr17 72177252 72177299 -17327254 + (TG)n Simple_repeat Simple_repeat 2 48 0 530 249 51 4 chr17 72177337 72177574 -17326979 - L1ME4a LINE L1 -2969 3972 3725 2186 127 0 0 chr17 72177700 72178026 -17326527 - AluSx SINE Alu 0 312 1 522 332 40 4 chr17 72178046 72178323 -17326230 - L1ME4a LINE L1 -4584 2538 2252 247 205 28 3 chr17 72178330 72178401 -17326152 - L1MCc LINE L1 -5080 1343 1283 253 293 103 35 chr17 72178867 72178983 -17325570 - L1MCc LINE L1 -5946 985 862 380 338 81 14 chr17 72178986 72179196 -17325357 - L1M4 LINE L1 -1327 4819 4596 735 165 17 0 chr17 72179300 72179415 -17325138 - FLAM_C SINE Alu -21 122 6 2466 64 0 39 chr17 72179989 72180300 -17324253 - AluY SINE Alu -12 299 1 330 290 31 67 chr17 72180301 72180525 -17324028 + L1ME4a LINE L1 5574 5789 -332 791 186 71 0 chr17 72180646 72180786 -17323767 - FRAM SINE Alu -22 154 5 209 0 0 88 chr17 72180795 72180829 -17323724 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 6373 102 0 5 chr17 72180829 72182303 -17322250 - L1PA10 LINE L1 -21 6147 4681 2245 136 0 0 chr17 72183433 72183743 -17320810 - AluSx SINE Alu -2 310 1 423 243 168 8 chr17 72183822 72183954 -17320599 - MIR SINE MIR -62 146 35 1261 226 48 102 chr17 72184123 72184161 -17320392 - MLT1H1 LTR MaLR -16 539 501 2417 73 6 16 chr17 72184161 72184477 -17320076 + AluSq SINE Alu 1 313 0 1261 226 48 102 chr17 72184477 72184739 -17319814 - MLT1H1 LTR MaLR -54 501 226 898 195 147 0 chr17 72184739 72184929 -17319624 + MER20 DNA MER1_type 2 219 0 1261 226 48 102 chr17 72184929 72185057 -17319496 - MLT1H1 LTR MaLR -329 226 144 2137 132 0 7 chr17 72185057 72185352 -17319201 + AluSx SINE Alu 2 294 -18 1261 226 48 102 chr17 72185352 72185479 -17319074 - MLT1H1 LTR MaLR -411 144 12 1573 88 0 5 chr17 72186043 72186247 -17318306 + AluY SINE Alu 107 309 -2 350 290 101 7 chr17 72186396 72186534 -17318019 - L1ME4a LINE L1 0 6121 5971 260 298 15 30 chr17 72186806 72186937 -17317616 + L1ME4a LINE L1 5938 6066 -55 488 316 71 18 chr17 72187364 72187589 -17316964 + MIR SINE MIR 23 259 -3 348 224 233 0 chr17 72188173 72188289 -17316264 + MER103 DNA DNA 3 145 -21 551 256 118 19 chr17 72188417 72188638 -17315915 + MIR SINE MIR 20 262 0 205 326 30 37 chr17 72188615 72188684 -17315869 - MIR3 SINE MIR -31 177 108 * 2501 112 103 10 chr17 72188684 72189102 -17315451 - MSTB2 LTR MaLR 0 457 1 205 326 30 37 chr17 72189102 72189167 -17315386 - MIR3 SINE MIR -100 108 44 419 243 155 0 chr17 72190374 72190531 -17314022 - MER5A DNA MER1_type 0 189 5 688 279 0 6 chr17 72190537 72190716 -17313837 + MER5B DNA MER1_type 1 178 0 316 267 50 0 chr17 72190718 72190819 -17313734 + L2 LINE L2 3149 3254 -18 191 318 52 78 chr17 72191179 72191333 -17313220 + L2 LINE L2 3076 3225 -47 342 0 0 0 chr17 72191339 72191377 -17313176 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 340 290 57 8 chr17 72192197 72192321 -17312232 - MIR SINE MIR -31 231 102 1510 251 60 81 chr17 72193730 72194436 -17310117 - MER21B LTR ERV1 -149 714 24 2151 138 10 0 chr17 72195092 72195397 -17309156 - AluSx SINE Alu -4 308 1 217 313 102 20 chr17 72195480 72195627 -17308926 - MIR3 SINE MIR -13 195 37 1064 298 100 16 chr17 72196326 72196887 -17307666 - L2 LINE L2 -558 2756 2149 233 218 13 0 chr17 72197057 72197135 -17307418 + (TGGA)n Simple_repeat Simple_repeat 1 79 0 661 180 12 0 chr17 72197292 72197464 -17307089 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 2369 97 7 0 chr17 72198211 72198521 -17306032 + AluSq SINE Alu 2 313 0 211 286 43 0 chr17 72198521 72198591 -17305962 + MER5A DNA MER1_type 64 136 -53 183 238 95 0 chr17 72200432 72200474 -17304079 - L2 LINE L2 -25 3288 3243 1635 185 13 61 chr17 72201101 72201495 -17303058 - MLT1B LTR MaLR -15 375 1 206 313 31 0 chr17 72201562 72201626 -17302927 + MIR SINE MIR 53 118 -90 375 86 0 0 chr17 72202541 72202599 -17301954 - AluSx SINE Alu 0 302 245 2661 56 0 0 chr17 72202621 72202925 -17301628 + AluY SINE Alu 1 304 -7 3068 70 81 0 chr17 72202925 72203369 -17301184 - LTR19A LTR ERV1 -5 481 2 1905 118 0 0 chr17 72203369 72203615 -17300938 - AluSx SINE Alu -62 250 5 1599 196 22 48 chr17 72203852 72204265 -17300288 - MLT2D LTR ERVL -8 406 5 188 184 79 0 chr17 72204863 72204901 -17299652 + MIR SINE MIR 81 121 -87 189 295 132 39 chr17 72205021 72205150 -17299403 + MIR3 SINE MIR 39 179 -29 764 225 60 23 chr17 72205419 72205637 -17298916 - MLT1L LTR MaLR -230 385 160 515 294 123 24 chr17 72205637 72206026 -17298527 - MLT1G3 LTR MaLR 0 595 90 489 258 0 23 chr17 72206035 72206163 -17298390 - MLT1G3 LTR MaLR -466 129 5 285 299 39 0 chr17 72206203 72206280 -17298273 - MER5A DNA MER1_type -75 114 35 402 188 0 35 chr17 72206296 72206381 -17298172 + MER5B DNA MER1_type 97 178 0 282 333 11 11 chr17 72207411 72207498 -17297055 - MIR3 SINE MIR -45 163 77 907 222 74 5 chr17 72209583 72209786 -17294767 - MER20 DNA MER1_type 0 219 3 322 205 128 0 chr17 72209851 72209929 -17294624 + 5S rRNA rRNA 3 90 -31 235 246 0 0 chr17 72209931 72209988 -17294565 - L1MC5 LINE L1 -79 7882 7826 497 256 54 6 chr17 72209994 72210162 -17294391 - L1MC5 LINE L1 -177 7784 7609 183 42 0 0 chr17 72210163 72210187 -17294366 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2336 72 0 0 chr17 72210187 72210464 -17294089 - AluSg1 SINE Alu -32 277 1 630 324 34 18 chr17 72210610 72210783 -17293770 - L1MC5 LINE L1 -535 7426 7244 2452 77 3 0 chr17 72210783 72211083 -17293470 - AluSx SINE Alu -11 301 1 630 324 34 18 chr17 72211083 72211236 -17293317 - L1MC5 LINE L1 -717 7244 7095 361 228 207 21 chr17 72212063 72212208 -17292345 - MIR SINE MIR -6 256 85 680 295 95 17 chr17 72213029 72213388 -17291165 + LTR16A LTR ERVL 64 450 0 307 185 46 62 chr17 72213700 72213765 -17290788 - MIR SINE MIR -145 117 54 437 346 183 12 chr17 72214071 72214553 -17290000 - L3 LINE CR1 -219 1358 795 444 232 40 0 chr17 72215046 72215145 -17289408 - MER119 DNA MER1_type -4 579 477 1367 203 40 41 chr17 72215145 72215444 -17289109 + MER47A DNA MER2_type 1 256 -2067 882 93 0 0 chr17 72215444 72215562 -17288991 + FLAM_C SINE Alu 2 119 -14 1367 203 40 41 chr17 72215562 72215673 -17288880 + MER47A DNA MER2_type 256 366 0 421 271 0 56 chr17 72216051 72216087 -17288466 - MER119 DNA MER1_type -482 101 65 2301 82 0 7 chr17 72216087 72216408 -17288145 + AluSg SINE Alu 1 319 0 421 271 0 56 chr17 72216408 72216477 -17288076 - MER119 DNA MER1_type -518 65 1 409 286 38 0 chr17 72216486 72216619 -17287934 - L1MC4 LINE L1 -163 7879 7742 409 330 70 0 chr17 72217299 72217514 -17287039 + MIR SINE MIR 31 260 -2 2330 98 19 26 chr17 72217676 72218054 -17286499 - THE1C LTR MaLR 0 375 1 994 258 100 15 chr17 72218578 72218919 -17285634 + MLT1A2 LTR MaLR 1 370 -4 360 0 0 0 chr17 72219066 72219106 -17285447 + (CA)n Simple_repeat Simple_repeat 2 41 0 271 318 134 11 chr17 72219951 72220130 -17284423 - L2 LINE L2 -208 3064 2864 2258 108 0 0 chr17 72220260 72220571 -17283982 + AluSx SINE Alu 2 312 0 183 379 33 26 chr17 72220645 72220798 -17283755 - MIR SINE MIR -86 176 23 236 209 0 0 chr17 72220864 72220907 -17283646 - L2 LINE L2 -17 3296 3254 207 178 89 0 chr17 72221038 72221083 -17283470 - L2 LINE L2 -259 3054 3006 21 0 0 0 chr17 72221393 72221414 -17283139 + AT_rich Low_complexity Low_complexity 1 21 0 676 271 119 33 chr17 72221452 72221847 -17282706 + MER113 DNA MER1_type? 44 472 -49 266 268 72 21 chr17 72221983 72222080 -17282473 - MIR SINE MIR -88 120 19 1627 110 132 44 chr17 72222129 72222401 -17282152 - AluSx SINE Alu -16 296 1 2132 146 13 3 chr17 72222402 72222710 -17281843 - AluSx SINE Alu -1 311 1 1997 86 105 0 chr17 72224662 72224929 -17279624 - AluSx SINE Alu -15 297 3 187 197 53 105 chr17 72225040 72225116 -17279437 - L2 LINE L2 -2 3311 3240 1633 278 144 68 chr17 72225488 72226010 -17278543 + L2 LINE L2 1222 1703 -1611 1860 56 0 0 chr17 72226010 72226226 -17278327 - AluY SINE Alu -95 216 1 1633 278 144 68 chr17 72226226 72226351 -17278202 + L2 LINE L2 1703 1817 -1497 1970 167 3 3 chr17 72226351 72226663 -17277890 - AluJb SINE Alu 0 312 1 1633 278 144 68 chr17 72226663 72227207 -17277346 + L2 LINE L2 1817 2318 -996 1990 188 4 40 chr17 72227207 72227604 -17276949 + L1MB3 LINE L1 5748 6130 -53 1865 119 56 4 chr17 72227604 72227899 -17276654 + AluSx SINE Alu 1 309 0 1990 188 4 40 chr17 72227899 72227952 -17276601 + L1MB3 LINE L1 6130 6183 0 1633 278 144 68 chr17 72227952 72227969 -17276584 + L2 LINE L2 2318 2332 -982 2226 100 0 0 chr17 72227969 72228278 -17276275 + AluSc SINE Alu 1 309 0 1633 278 144 68 chr17 72228278 72228383 -17276170 + L2 LINE L2 2332 2640 -674 697 302 63 37 chr17 72228572 72228647 -17275906 + L2 LINE L2 2888 2960 -353 1924 165 7 10 chr17 72228647 72228956 -17275597 - AluJb SINE Alu -2 310 3 697 302 63 37 chr17 72228956 72229290 -17275263 + L2 LINE L2 2960 3308 -5 391 289 50 19 chr17 72229355 72229514 -17275039 - MER5A DNA MER1_type -2 187 24 211 277 0 0 chr17 72229965 72230012 -17274541 + CT-rich Low_complexity Low_complexity 2 48 0 264 122 0 0 chr17 72230013 72230054 -17274499 + (CA)n Simple_repeat Simple_repeat 1 41 0 347 262 0 7 chr17 72230317 72230458 -17274095 + (CA)n Simple_repeat Simple_repeat 2 141 0 263 363 100 39 chr17 72230723 72231134 -17273419 - L2 LINE L2 -28 3244 2809 1334 226 93 35 chr17 72231305 72231734 -17272819 - MLT1J LTR MaLR -9 502 49 2169 81 0 4 chr17 72232291 72232562 -17271991 - AluY SINE Alu -5 306 37 383 199 74 130 chr17 72233545 72233761 -17270792 + MLT1K LTR MaLR 379 582 -6 2173 113 34 0 chr17 72233823 72234116 -17270437 - AluSx SINE Alu -9 303 1 363 44 0 0 chr17 72234631 72234676 -17269877 + (CA)n Simple_repeat Simple_repeat 1 45 0 196 240 20 0 chr17 72235112 72235162 -17269391 - L2 LINE L2 0 3313 3263 1176 227 71 80 chr17 72235293 72235755 -17268798 + MLT1H LTR MaLR 1 499 -50 4392 183 34 21 chr17 72235952 72235986 -17268567 - MER21B LTR ERV1 0 863 831 2161 120 30 35 chr17 72235986 72236352 -17268201 + THE1B LTR MaLR 1 364 0 4392 183 34 21 chr17 72236352 72237169 -17267384 - MER21B LTR ERV1 -32 831 1 3111 115 45 34 chr17 72237217 72237406 -17267147 - MER34B LTR ERV1 -29 536 351 6893 55 0 0 chr17 72237406 72238357 -17266196 - L1PA7 LINE L1 0 6154 5199 3111 115 45 34 chr17 72238357 72238697 -17265856 - MER34B LTR ERV1 -214 351 1 435 347 53 6 chr17 72238725 72239062 -17265491 - L1ME4a LINE L1 -205 5916 5564 1497 160 57 107 chr17 72239063 72239612 -17264941 - Charlie1b DNA MER1_type -2 521 7 252 183 17 0 chr17 72239672 72239732 -17264821 - L1MB8 LINE L1 0 6178 6118 290 182 61 0 chr17 72239732 72239798 -17264755 + MLT1H LTR MaLR 480 549 0 228 311 0 14 chr17 72240172 72240246 -17264307 - L2 LINE L2 0 3313 3241 522 269 150 0 chr17 72240603 72240770 -17263783 - MER117 DNA MER1_type 0 197 6 588 279 115 0 chr17 72240857 72241040 -17263513 + MIR SINE MIR 28 231 -31 620 311 115 13 chr17 72241546 72241858 -17262695 + L1MC4a LINE L1 5260 5603 -2205 563 264 100 11 chr17 72241876 72242156 -17262397 + L1MC4a LINE L1 5665 5969 -1839 1965 144 26 10 chr17 72242337 72242643 -17261910 + AluSx SINE Alu 1 311 -1 281 316 20 72 chr17 72243004 72243121 -17261432 + MLT1F LTR MaLR 11 119 -423 2699 149 8 35 chr17 72243121 72243520 -17261033 - MER66A LTR ERV1 0 478 93 1973 145 47 19 chr17 72243520 72243885 -17260668 + THE1C LTR MaLR 1 375 0 2699 149 8 35 chr17 72243885 72243976 -17260577 - MER66A LTR ERV1 -385 93 1 564 272 44 11 chr17 72244148 72244328 -17260225 + MLT1G1 LTR MaLR 407 592 -3 675 284 25 15 chr17 72244362 72244563 -17259990 - MIR SINE MIR -58 204 2 1586 146 86 8 chr17 72244883 72245150 -17259403 + AluJb SINE Alu 1 288 -24 1035 264 126 30 chr17 72245222 72245691 -17258862 - LTR67 LTR ERVL 0 557 44 431 279 39 16 chr17 72245712 72245841 -17258712 - MIR3 SINE MIR -30 178 47 314 282 137 0 chr17 72245907 72246024 -17258529 - L2 LINE L2 0 3272 3140 2517 55 0 0 chr17 72246082 72246371 -17258182 + AluY SINE Alu 1 289 -22 359 358 0 7 chr17 72246650 72246787 -17257766 - L2 LINE L2 -225 3047 2912 567 0 0 0 chr17 72246788 72246851 -17257702 + (TTTAA)n Simple_repeat Simple_repeat 3 65 0 1838 156 0 17 chr17 72246851 72247140 -17257413 - AluJb SINE Alu -27 285 2 307 348 111 11 chr17 72247698 72247879 -17256674 + MIR SINE MIR 21 219 -43 330 219 33 59 chr17 72247882 72248022 -17256531 - MIR SINE MIR -62 146 12 555 264 19 19 chr17 72248530 72248689 -17255864 - MIR SINE MIR -82 180 22 2936 7 0 0 chr17 72248796 72249104 -17255449 + AluYa5 SINE Alu 1 308 -3 2544 84 20 17 chr17 72249153 72249510 -17255043 - THE1B LTR MaLR -6 358 1 561 309 14 18 chr17 72249512 72249790 -17254763 + L1MC4a LINE L1 5732 6008 -1800 1477 210 10 19 chr17 72249881 72250190 -17254363 - AluJo SINE Alu -1 311 6 647 197 0 28 chr17 72250196 72250338 -17254215 - L1MD2 LINE L1 -15 6344 6207 3861 139 21 44 chr17 72250382 72250772 -17253781 - L1MB3 LINE L1 -10 6173 5807 2584 110 3 0 chr17 72250772 72251146 -17253407 + THE1C LTR MaLR 1 375 0 3861 139 21 44 chr17 72251146 72251512 -17253041 - L1MB3 LINE L1 -376 5807 5434 349 349 16 11 chr17 72251910 72252099 -17252454 + L2 LINE L2 2512 2701 -613 2240 110 34 8 chr17 72252456 72252811 -17251742 + THE1B LTR MaLR 1 364 0 290 298 11 21 chr17 72254073 72254167 -17250386 + MIR SINE MIR 23 115 -147 284 315 22 0 chr17 72254289 72254378 -17250175 + MIR3 SINE MIR 101 191 -17 375 286 17 8 chr17 72255436 72255555 -17248998 + MIR SINE MIR 79 198 -64 420 300 25 0 chr17 72255555 72255675 -17248878 - L2 LINE L2 -4 3309 3187 851 286 60 15 chr17 72255822 72256150 -17248403 + MLT1I LTR MaLR 64 407 -2 894 211 217 36 chr17 72256700 72257037 -17247516 - LTR33A LTR ERVL -5 518 121 486 285 139 78 chr17 72257378 72257489 -17247064 + MLT1L LTR MaLR 310 413 -202 2221 85 0 30 chr17 72257489 72257784 -17246769 + AluSq SINE Alu 21 306 -7 486 285 139 78 chr17 72257784 72257953 -17246600 + MLT1L LTR MaLR 413 607 -8 2079 138 3 3 chr17 72258245 72258557 -17245996 + AluSx SINE Alu 1 312 0 265 323 128 8 chr17 72258893 72259026 -17245527 + L2 LINE L2 3159 3307 -6 183 80 0 0 chr17 72259030 72259055 -17245498 + (TGAG)n Simple_repeat Simple_repeat 4 28 0 214 308 103 89 chr17 72260534 72260758 -17243795 + L2 LINE L2 2906 3132 -140 482 257 139 32 chr17 72261233 72261420 -17243133 + MIR SINE MIR 20 226 -36 196 313 0 16 chr17 72262547 72262611 -17241942 + L2 LINE L2 2712 2774 -540 1266 206 103 53 chr17 72262989 72263445 -17241108 - MLT1D LTR MaLR -26 479 1 629 314 146 33 chr17 72264668 72265514 -17239039 - L2 LINE L2 0 3313 2367 280 282 8 97 chr17 72265588 72265657 -17238896 + L2 LINE L2 3136 3191 -81 1065 175 0 0 chr17 72265657 72265823 -17238730 - FRAM SINE Alu 0 166 1 280 282 8 97 chr17 72265823 72265877 -17238676 + L2 LINE L2 3191 3248 -24 1282 230 101 39 chr17 72265885 72266320 -17238233 - MLT1C LTR MaLR 0 467 6 494 227 107 7 chr17 72268891 72269041 -17235512 + MER5B DNA MER1_type 14 178 0 480 309 13 7 chr17 72269050 72269202 -17235351 + MIR SINE MIR 20 172 -90 2261 101 0 0 chr17 72269559 72269856 -17234697 + AluSx SINE Alu 1 297 -15 2333 50 0 0 chr17 72269869 72270187 -17234366 - AluY SINE Alu 0 322 5 1233 116 0 0 chr17 72270767 72270939 -17233614 - AluSq SINE Alu -7 306 135 2288 44 6 87 chr17 72270939 72271283 -17233270 - AluYb8 SINE Alu -2 316 1 515 342 99 5 chr17 72271569 72271791 -17232762 + MIR SINE MIR 18 260 -2 286 281 11 11 chr17 72271876 72271965 -17232588 - MIR SINE MIR -138 124 36 183 42 0 0 chr17 72273188 72273212 -17231341 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1920 112 0 51 chr17 72273212 72273507 -17231046 - AluSx SINE Alu -32 280 1 297 330 97 35 chr17 72273622 72273824 -17230729 + MIR SINE MIR 4 252 -10 195 42 0 0 chr17 72274048 72274072 -17230481 + (A)n Simple_repeat Simple_repeat 1 24 0 308 311 26 63 chr17 72275296 72275456 -17229097 + MIR SINE MIR 2 152 -58 2099 133 0 0 chr17 72275478 72275771 -17228782 + AluSx SINE Alu 1 293 -19 2247 86 7 0 chr17 72275913 72276205 -17228348 - AluSc SINE Alu -15 294 1 2225 101 10 0 chr17 72276237 72276534 -17228019 - AluSx SINE Alu -12 300 1 404 150 12 0 chr17 72277193 72277273 -17227280 + GA-rich Low_complexity Low_complexity 2 82 0 202 196 0 43 chr17 72277669 72277715 -17226838 - L2 LINE L2 -6 3266 3223 378 74 0 0 chr17 72278779 72278833 -17225720 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 277 274 0 44 chr17 72278882 72279017 -17225536 + G-rich Low_complexity Low_complexity 4 132 0 32 26 0 0 chr17 72279018 72279057 -17225496 + GC_rich Low_complexity Low_complexity 1 39 0 40 79 0 0 chr17 72279116 72279205 -17225348 + GC_rich Low_complexity Low_complexity 1 89 0 193 28 0 56 chr17 72279213 72279249 -17225304 + (CGGG)n Simple_repeat Simple_repeat 2 35 0 29 0 0 0 chr17 72279418 72279447 -17225106 + GC_rich Low_complexity Low_complexity 1 29 0 402 173 0 0 chr17 72279518 72279593 -17224960 + (CA)n Simple_repeat Simple_repeat 1 75 0 256 274 0 0 chr17 72279862 72279935 -17224618 + G-rich Low_complexity Low_complexity 1 73 0 29 0 0 0 chr17 72279984 72280013 -17224540 + GC_rich Low_complexity Low_complexity 1 29 0 274 270 0 0 chr17 72280050 72280113 -17224440 + G-rich Low_complexity Low_complexity 3 65 0 357 371 51 0 chr17 72282383 72282558 -17221995 - MIR SINE MIR -51 211 28 440 230 0 48 chr17 72282725 72282912 -17221641 + CT-rich Low_complexity Low_complexity 1 178 0 * 854 85 0 53 chr17 72282887 72283075 -17221478 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 308 233 0 11 chr17 72283085 72283175 -17221378 + C-rich Low_complexity Low_complexity 4 92 0 311 231 33 0 chr17 72283175 72283266 -17221287 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 192 286 65 13 chr17 72284442 72284519 -17220034 - MIR SINE MIR -65 197 117 705 241 0 6 chr17 72284668 72284830 -17219723 - MLT1A2 LTR MaLR -6 368 208 240 167 21 0 chr17 72284907 72284955 -17219598 - MER20 DNA MER1_type 0 219 171 657 216 62 41 chr17 72284964 72285158 -17219395 - MLT1A2 LTR MaLR -176 198 1 200 250 105 0 chr17 72285433 72285509 -17219044 + MIR3 SINE MIR 115 198 -10 409 333 199 16 chr17 72285772 72286407 -17218146 - L2 LINE L2 0 3313 2544 909 215 48 5 chr17 72286678 72286887 -17217666 - MER20 DNA MER1_type 0 219 2 2342 103 0 0 chr17 72287001 72287313 -17217240 + AluSx SINE Alu 1 312 0 1890 128 31 3 chr17 72287321 72287610 -17216943 + AluSx SINE Alu 1 297 -15 319 343 56 0 chr17 72288761 72288904 -17215649 + MIR SINE MIR 2 152 -110 487 295 35 75 chr17 72289719 72289946 -17214607 + MIR SINE MIR 34 251 -11 405 304 9 0 chr17 72290537 72290649 -17213904 + MIR SINE MIR 30 142 -66 357 207 20 51 chr17 72290710 72291013 -17213540 + CT-rich Low_complexity Low_complexity 1 293 0 187 277 21 0 chr17 72291294 72291341 -17213212 - L2 LINE L2 -1 3271 3224 422 321 136 21 chr17 72291397 72291677 -17212876 + L2 LINE L2 2512 2823 -491 647 240 10 74 chr17 72291795 72292005 -17212548 + MIR SINE MIR 35 229 -33 194 379 46 0 chr17 72292340 72292427 -17212126 + MIR SINE MIR 158 248 -14 555 339 49 4 chr17 72292461 72292706 -17211847 + MIR SINE MIR 4 259 -3 218 200 0 22 chr17 72293550 72293595 -17210958 + CT-rich Low_complexity Low_complexity 3 46 0 241 216 93 31 chr17 72293884 72293981 -17210572 + L1ME4a LINE L1 5965 6067 -54 2356 81 0 19 chr17 72294103 72294411 -17210142 - AluSg SINE Alu -8 302 1 2225 106 13 0 chr17 72294975 72295276 -17209277 - AluSx SINE Alu -7 305 1 186 171 0 0 chr17 72295316 72295357 -17209196 + A-rich Low_complexity Low_complexity 1 41 0 217 337 23 51 chr17 72295638 72295813 -17208740 - L3b LINE CR1 -202 1381 1212 346 153 0 0 chr17 72296303 72296362 -17208191 - AluJo SINE Alu -14 288 230 566 180 0 0 chr17 72296362 72296462 -17208091 - LTR12 LTR ERV1 0 714 615 235 237 52 21 chr17 72296464 72296561 -17207992 - LTR30 LTR ERV1 -79 643 544 1159 142 103 79 chr17 72296561 72296929 -17207624 - LTR12 LTR ERV1 -417 2021 55 249 231 0 0 chr17 72296929 72296981 -17207572 - LTR30 LTR ERV1 -670 52 1 1349 194 4 0 chr17 72296981 72297213 -17207340 - AluJo SINE Alu -79 233 1 1021 281 24 4 chr17 72297213 72297466 -17207087 - MIR SINE MIR -1 261 4 627 235 123 4 chr17 72298218 72298450 -17206103 + L1ME3 LINE L1 5903 6170 0 1579 172 34 14 chr17 72298454 72298751 -17205802 + AluJo SINE Alu 1 303 -9 189 0 0 0 chr17 72299627 72299648 -17204905 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 192 326 27 82 chr17 72299649 72299833 -17204720 - L2 LINE L2 -14 3299 3126 272 309 41 10 chr17 72299865 72299962 -17204591 - L2 LINE L2 -196 3076 2977 246 128 0 0 chr17 72300294 72300333 -17204220 + (GAA)n Simple_repeat Simple_repeat 2 40 0 1400 111 47 47 chr17 72301051 72301349 -17203204 - MLT1C LTR MaLR -169 298 1 833 141 43 6 chr17 72301349 72301512 -17203041 + L1MB5 LINE L1 5899 6067 -107 358 208 28 0 chr17 72301512 72301594 -17202959 - MIR SINE MIR -80 128 45 242 354 108 13 chr17 72301635 72301793 -17202760 + MIR SINE MIR 90 262 0 706 159 46 7 chr17 72301799 72301950 -17202603 - LTR33A LTR ERVL -4 519 363 864 214 98 0 chr17 72301989 72302204 -17202349 - LTR33A LTR ERVL -242 281 46 2086 134 0 7 chr17 72303134 72303439 -17201114 + AluSx SINE Alu 1 303 -9 2045 221 31 11 chr17 72303517 72303973 -17200580 + MLT1C LTR MaLR 3 467 0 248 315 100 8 chr17 72304088 72304218 -17200335 - MIR SINE MIR -9 253 112 1392 249 146 43 chr17 72304335 72304870 -17199683 - MLT1E LTR MaLR -3 590 1 399 262 33 95 chr17 72304884 72305005 -17199548 + MIR SINE MIR 15 120 -142 2369 53 0 0 chr17 72305005 72305337 -17199216 - AluY SINE Alu 0 332 1 399 262 33 95 chr17 72305337 72305424 -17199129 + MIR SINE MIR 120 211 -51 183 42 0 0 chr17 72305678 72305702 -17198851 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 311 287 89 85 chr17 72306333 72306615 -17197938 + L2 LINE L2 2990 3272 0 209 33 33 0 chr17 72306738 72306768 -17197785 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 345 248 14 11 chr17 72307138 72307249 -17197304 + MER69 DNA AcHobo 57 2523 -3 2181 82 0 49 chr17 72307970 72308276 -17196277 - AluSg SINE Alu -19 291 1 1812 161 14 0 chr17 72308411 72308703 -17195850 + AluJo SINE Alu 6 301 -11 304 309 0 0 chr17 72308790 72308871 -17195682 - MIR SINE MIR -90 172 92 275 304 180 10 chr17 72308956 72309150 -17195403 + MIR SINE MIR 17 243 -19 2244 97 0 0 chr17 72309927 72310217 -17194336 + AluSg SINE Alu 1 290 -20 2196 112 0 3 chr17 72310734 72311038 -17193515 - AluSx SINE Alu -9 303 1 276 372 96 18 chr17 72311543 72311876 -17192677 - L2 LINE L2 -697 2617 2259 1918 139 0 4 chr17 72311892 72312173 -17192380 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr17 72312175 72312198 -17192355 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1401 144 93 31 chr17 72312581 72312838 -17191715 - AluJo SINE Alu -16 296 24 809 257 83 29 chr17 72313369 72313610 -17190943 + MIR SINE MIR 9 262 0 225 0 0 0 chr17 72313633 72313658 -17190895 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1909 101 34 130 chr17 72313753 72314168 -17190385 - THE1C LTR MaLR 0 375 1 2783 88 6 3 chr17 72315311 72315674 -17188879 + THE1B LTR MaLR 1 364 0 250 277 123 36 chr17 72315722 72316024 -17188529 + L2 LINE L2 2842 3249 -23 245 264 14 14 chr17 72316073 72316145 -17188408 + L3 LINE CR1 1244 1315 -262 2668 110 6 3 chr17 72316404 72316767 -17187786 - THE1B LTR MaLR 0 364 1 341 74 0 19 chr17 72316950 72317004 -17187549 + (TC)n Simple_repeat Simple_repeat 1 53 0 564 253 42 6 chr17 72317088 72317254 -17187299 + MIR SINE MIR 77 248 -14 660 277 60 28 chr17 72317481 72317730 -17186823 - MIR SINE MIR 0 262 6 450 211 97 0 chr17 72317755 72317869 -17186684 + MER117 DNA MER1_type 37 161 -36 935 156 38 66 chr17 72317902 72318113 -17186440 - MER20 DNA MER1_type -10 209 5 503 290 38 33 chr17 72318146 72318329 -17186224 + MIR3 SINE MIR 23 206 -2 195 100 0 0 chr17 72318476 72318506 -17186047 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 1701 186 0 3 chr17 72319087 72319377 -17185176 - AluJb SINE Alu -19 293 5 2141 131 0 0 chr17 72321250 72321555 -17182998 + AluSx SINE Alu 1 305 -7 217 213 0 21 chr17 72322036 72322083 -17182470 + L2 LINE L2 3160 3205 -67 690 261 80 21 chr17 72322087 72322450 -17182103 - MLT1J2 LTR MaLR -21 388 1 243 216 0 0 chr17 72322462 72322513 -17182040 + L2 LINE L2 3221 3271 -1 226 273 31 47 chr17 72322872 72322928 -17181625 + MIR SINE MIR 13 68 -194 2517 153 12 46 chr17 72322928 72323065 -17181488 + MLT1C LTR MaLR 2 142 -325 1848 106 0 4 chr17 72323065 72323319 -17181234 + AluSx SINE Alu 43 295 -17 2517 153 12 46 chr17 72323319 72323663 -17180890 + MLT1C LTR MaLR 142 467 0 226 273 31 47 chr17 72323663 72323734 -17180819 + MIR SINE MIR 68 138 -124 1692 161 84 19 chr17 72323935 72324272 -17180281 - MLT1A1 LTR MaLR -5 588 1 347 263 23 33 chr17 72324775 72324960 -17179593 + MIR SINE MIR 19 262 0 300 210 74 25 chr17 72325875 72325956 -17178597 + L2 LINE L2 3183 3267 -46 285 29 0 0 chr17 72325982 72326016 -17178537 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 185 167 0 0 chr17 72326543 72326579 -17177974 + MIR SINE MIR 110 145 -117 310 286 104 48 chr17 72326810 72327041 -17177512 - LTR16C LTR ERVL -114 377 134 316 379 7 14 chr17 72327730 72327870 -17176683 - HAL1b LINE L1 -23 1325 1187 2046 131 3 0 chr17 72327880 72328177 -17176376 + AluSx SINE Alu 1 298 -14 382 315 219 18 chr17 72328677 72329012 -17175541 + L3 LINE CR1 780 1203 -374 2241 119 0 0 chr17 72329012 72329324 -17175229 + AluSx SINE Alu 1 312 0 382 315 219 18 chr17 72329324 72329372 -17175181 + L3 LINE CR1 1203 1240 -337 2232 222 47 4 chr17 72329453 72329962 -17174591 + L1MD1 LINE L1 5707 6237 -5 365 349 0 0 chr17 72330478 72330604 -17173949 - MIR SINE MIR -19 243 118 1987 131 0 10 chr17 72331436 72331734 -17172819 - AluJb SINE Alu -17 295 1 2184 86 0 0 chr17 72331856 72332173 -17172380 - AluSc SINE Alu 0 317 1 460 248 85 8 chr17 72333788 72333917 -17170636 + MER91C DNA MER1_type 1 139 -1 932 241 103 2 chr17 72334255 72334647 -17169906 - LTR33 LTR ERVL -14 507 14 406 241 50 64 chr17 72335254 72335279 -17169274 - L2 LINE L2 0 3313 3289 1706 174 17 7 chr17 72335279 72335573 -17168980 + AluJo SINE Alu 1 297 -15 406 241 50 64 chr17 72335573 72335688 -17168865 - L2 LINE L2 -24 3289 3175 475 302 31 21 chr17 72336108 72336300 -17168253 - MER91A DNA MER1_type 0 196 3 1898 112 4 0 chr17 72336434 72336702 -17167851 - AluSx SINE Alu -13 299 31 1013 234 117 62 chr17 72337274 72337623 -17166930 - MLT1C LTR MaLR -2 465 137 2439 78 0 0 chr17 72337623 72337932 -17166621 - AluY SINE Alu -2 309 1 2198 93 0 17 chr17 72337933 72338234 -17166319 - AluSq SINE Alu -17 296 1 1013 234 117 62 chr17 72338234 72338317 -17166236 - MLT1C LTR MaLR -329 138 7 217 235 174 41 chr17 72338317 72338415 -17166138 - MIR SINE MIR -92 170 60 447 327 69 5 chr17 72338597 72338799 -17165754 - MIR SINE MIR -35 227 13 733 211 123 6 chr17 72339512 72339683 -17164870 + L1MB5 LINE L1 5983 6173 -1 299 106 45 62 chr17 72340404 72340583 -17163970 + (TG)n Simple_repeat Simple_repeat 1 176 0 461 198 28 50 chr17 72340638 72340820 -17163733 + (TG)n Simple_repeat Simple_repeat 2 179 0 299 150 41 49 chr17 72340934 72341164 -17163389 + (TG)n Simple_repeat Simple_repeat 1 228 0 2222 91 0 3 chr17 72342102 72342399 -17162154 + AluSx SINE Alu 9 304 -8 2550 52 0 0 chr17 72342629 72342939 -17161614 + AluY SINE Alu 1 310 -1 841 263 21 0 chr17 72342974 72343168 -17161385 - MIR SINE MIR -29 233 36 336 318 68 0 chr17 72343168 72343300 -17161253 + L1MC/D LINE L1 5389 5529 -2279 787 239 42 19 chr17 72343328 72343408 -17161145 + L1MD3 LINE L1 7729 7806 -189 1995 108 7 20 chr17 72343408 72343704 -17160849 + AluSx SINE Alu 1 292 -20 2111 90 0 14 chr17 72343707 72344028 -17160525 + AluSg SINE Alu 1 317 0 787 239 42 19 chr17 72344028 72344201 -17160352 + L1MD3 LINE L1 7807 7993 -2 189 0 0 0 chr17 72344510 72344531 -17160022 + (TG)n Simple_repeat Simple_repeat 1 21 0 26 30 0 0 chr17 72347724 72347757 -17156796 + AT_rich Low_complexity Low_complexity 1 33 0 653 331 173 31 chr17 72348576 72349179 -17155374 + L2 LINE L2 567 1083 -2231 2226 188 64 21 chr17 72349179 72349663 -17154890 + MLT1D LTR MaLR 1 505 0 653 331 173 31 chr17 72349663 72349725 -17154828 + L2 LINE L2 1083 1135 -2179 2741 94 8 0 chr17 72349725 72350086 -17154467 + THE1B LTR MaLR 1 364 0 653 331 173 31 chr17 72350086 72350433 -17154120 + L2 LINE L2 1135 1431 -1883 2312 82 3 0 chr17 72350433 72350737 -17153816 + AluY SINE Alu 1 305 -6 653 331 173 31 chr17 72350737 72351220 -17153333 + L2 LINE L2 1431 2277 -1037 464 257 187 41 chr17 72351237 72351687 -17152866 + MLT1J LTR MaLR 1 450 0 1810 151 25 85 chr17 72351967 72352365 -17152188 - THE1C LTR MaLR -1 374 1 1634 162 46 20 chr17 72352414 72352716 -17151837 + AluSx SINE Alu 2 311 -1 3529 162 42 22 chr17 72353041 72353634 -17150919 - MER77 LTR ERV1 0 605 1 218 233 225 33 chr17 72353679 72353799 -17150754 + L2 LINE L2 3169 3311 -2 413 309 48 6 chr17 72354133 72354298 -17150255 - MIR SINE MIR -59 203 32 253 237 97 9 chr17 72354359 72354473 -17150080 + MER113 DNA MER1_type? 39 162 -359 2096 133 0 0 chr17 72354509 72354809 -17149744 + AluSx SINE Alu 1 300 -12 672 193 72 42 chr17 72355440 72355467 -17149086 - MLT1A2 LTR MaLR -202 172 147 2618 93 31 6 chr17 72355467 72355822 -17148731 + THE1B LTR MaLR 1 364 0 672 193 72 42 chr17 72355822 72355960 -17148593 - MLT1A2 LTR MaLR -227 147 2 191 359 94 0 chr17 72356028 72356134 -17148419 - MIR SINE MIR -113 149 34 198 276 157 30 chr17 72357286 72357420 -17147133 + MIR3 SINE MIR 51 201 -7 683 302 19 5 chr17 72357425 72357637 -17146916 + MIR SINE MIR 48 262 0 302 350 85 0 chr17 72358147 72358324 -17146229 + MER113 DNA MER1_type? 285 476 -45 721 256 12 0 chr17 72359676 72359840 -17144713 - MER45A DNA AcHobo -7 171 6 2169 110 23 0 chr17 72359879 72360180 -17144373 - AluSx SINE Alu -4 308 1 303 28 0 0 chr17 72361013 72361049 -17143504 + (CAGGG)n Simple_repeat Simple_repeat 3 38 0 241 232 58 14 chr17 72361488 72361557 -17142996 - MIR SINE MIR 0 262 191 6863 203 72 18 chr17 72361576 72362547 -17142006 + L1M4 LINE L1 14 1126 -5520 1470 174 3 76 chr17 72362547 72362864 -17141689 + AluJo SINE Alu 1 294 -18 6863 203 72 18 chr17 72362864 72363621 -17140932 + L1M4 LINE L1 1126 1841 -4805 474 282 15 26 chr17 72363621 72363795 -17140758 - MIR SINE MIR -32 176 28 1145 132 0 0 chr17 72367137 72367296 -17137257 - AluSg/x SINE Alu -17 293 135 271 230 27 14 chr17 72367658 72367732 -17136821 - MER5B DNA MER1_type 0 178 104 813 229 60 5 chr17 72367792 72367993 -17136560 - MER20 DNA MER1_type 0 219 8 345 140 20 10 chr17 72368956 72369056 -17135497 + (CA)n Simple_repeat Simple_repeat 2 102 0 350 203 0 16 chr17 72369137 72369376 -17135177 + (CA)n Simple_repeat Simple_repeat 1 235 0 1940 94 6 69 chr17 72369878 72370197 -17134356 - AluJo SINE Alu -13 299 1 577 226 0 9 chr17 72371686 72371801 -17132752 + MER58B DNA MER1_type 1 114 -227 2244 115 0 3 chr17 72371819 72372124 -17132429 + AluSg SINE Alu 1 304 -6 814 209 0 0 chr17 72372144 72372273 -17132280 + FLAM_C SINE Alu 3 131 -12 867 190 128 14 chr17 72372286 72372497 -17132056 + MER58B DNA MER1_type 107 341 0 1919 141 0 32 chr17 72372811 72373123 -17131430 - AluJo SINE Alu -10 302 1 833 163 0 15 chr17 72373125 72373260 -17131293 - FLAM_A SINE Alu 0 133 1 2353 92 13 0 chr17 72373329 72373635 -17130918 - AluSx SINE Alu 0 312 3 2073 81 4 0 chr17 72374124 72374384 -17130169 - AluSx SINE Alu -10 302 42 1440 127 4 18 chr17 72374456 72374684 -17129869 - AluJb SINE Alu -1 311 87 2158 205 52 17 chr17 72374781 72375298 -17129255 - L1MB3 LINE L1 -1 6182 5648 23 0 0 0 chr17 72375312 72375335 -17129218 + AT_rich Low_complexity Low_complexity 1 23 0 485 94 0 167 chr17 72375370 72375426 -17129127 - MADE1 DNA Mariner 0 80 45 2033 123 0 35 chr17 72375426 72375736 -17128817 + AluSx SINE Alu 1 299 -13 485 94 0 167 chr17 72375736 72375775 -17128778 - MADE1 DNA Mariner -35 45 1 2069 102 25 0 chr17 72376478 72376793 -17127760 - AluSx SINE Alu 0 322 1 2092 112 13 13 chr17 72377105 72377410 -17127143 - AluSq SINE Alu -8 305 1 1790 210 64 93 chr17 72377754 72378126 -17126427 - MLT1D LTR MaLR 0 505 151 2546 44 0 3 chr17 72378126 72378422 -17126131 + AluY SINE Alu 1 295 -16 1790 210 64 93 chr17 72378422 72378567 -17125986 - MLT1D LTR MaLR -354 151 3 234 247 136 37 chr17 72378593 72378674 -17125879 - L2 LINE L2 -41 3231 3143 2267 74 17 10 chr17 72378705 72379004 -17125549 + AluSq SINE Alu 11 311 -2 5909 75 16 14 chr17 72379027 72379378 -17125175 + MER4E LTR ERV1 1 350 -416 2316 107 0 0 chr17 72379378 72379678 -17124875 + AluSx SINE Alu 1 300 -12 5909 75 16 14 chr17 72379678 72380091 -17124462 + MER4E LTR ERV1 350 766 0 2355 86 0 0 chr17 72380102 72380404 -17124149 - AluSc SINE Alu -7 302 1 181 235 0 0 chr17 72380457 72380491 -17124062 + L2 LINE L2 2996 3029 -243 1845 163 3 28 chr17 72380834 72381153 -17123400 + AluJo SINE Alu 2 312 0 1962 127 13 7 chr17 72381413 72381712 -17122841 + AluSx SINE Alu 1 301 -11 268 330 55 9 chr17 72382972 72383081 -17121472 - L2 LINE L2 -4 3268 3155 236 257 114 38 chr17 72383376 72383481 -17121072 - L2 LINE L2 -549 2765 2653 21 0 0 0 chr17 72386372 72386393 -17118160 + AT_rich Low_complexity Low_complexity 1 21 0 2252 91 0 7 chr17 72386413 72386711 -17117842 + AluSc SINE Alu 2 297 -12 1096 167 50 0 chr17 72387219 72387399 -17117154 + MER5A DNA MER1_type 1 189 0 182 114 0 29 chr17 72389788 72389823 -17114730 + (TA)n Simple_repeat Simple_repeat 1 34 0 28 48 0 0 chr17 72390349 72390391 -17114162 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr17 72392124 72392155 -17112398 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 72392367 72392388 -17112165 + AT_rich Low_complexity Low_complexity 1 21 0 240 240 104 10 chr17 72393610 72393706 -17110847 - L1ME4a LINE L1 -10 6111 6007 327 266 102 62 chr17 72393964 72394383 -17110170 - L1ME4a LINE L1 -521 5600 5152 435 359 70 32 chr17 72394427 72394798 -17109755 - L1ME4a LINE L1 -1094 5052 4668 256 301 114 24 chr17 72394933 72395056 -17109497 - L2 LINE L2 -8 3305 3172 789 278 124 61 chr17 72395222 72395697 -17108856 + MLT1J LTR MaLR 7 511 0 227 224 0 60 chr17 72396372 72396439 -17108114 - MIR SINE MIR -7 255 193 23 33 0 0 chr17 72396909 72396939 -17107614 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 72397084 72397105 -17107448 + AT_rich Low_complexity Low_complexity 1 21 0 2403 107 0 0 chr17 72397205 72397514 -17107039 - AluSx SINE Alu -3 309 1 2103 104 47 0 chr17 72397717 72398016 -17106537 + AluSq SINE Alu 1 313 0 2695 29 0 3 chr17 72398738 72399048 -17105505 + AluY SINE Alu 1 309 -2 1770 134 51 4 chr17 72399208 72399484 -17105069 + AluSx SINE Alu 14 302 -10 2049 146 0 10 chr17 72399494 72399802 -17104751 + AluJb SINE Alu 1 305 -7 22 35 0 0 chr17 72399903 72399932 -17104621 + AT_rich Low_complexity Low_complexity 1 29 0 1911 126 29 4 chr17 72400663 72400941 -17103612 + AluSq SINE Alu 1 285 -28 510 86 0 0 chr17 72400941 72401022 -17103531 + (TA)n Simple_repeat Simple_repeat 1 81 0 313 336 137 0 chr17 72401629 72401775 -17102778 + MIR3 SINE MIR 30 195 -13 582 280 133 23 chr17 72402271 72402489 -17102064 + MIR SINE MIR 2 243 -19 22 35 0 0 chr17 72402493 72402522 -17102031 + AT_rich Low_complexity Low_complexity 1 29 0 227 400 45 5 chr17 72403071 72403271 -17101282 - L3 LINE CR1 -740 837 630 198 0 0 0 chr17 72404005 72404027 -17100526 + (TA)n Simple_repeat Simple_repeat 1 22 0 462 61 0 0 chr17 72404027 72404093 -17100460 + (GA)n Simple_repeat Simple_repeat 1 66 0 4785 234 43 40 chr17 72404096 72405512 -17099041 - L1ME4a LINE L1 -1821 4325 2906 872 238 45 30 chr17 72405634 72405903 -17098650 + L1MC5 LINE L1 6960 7232 -729 251 233 194 8 chr17 72406008 72406137 -17098416 - L1ME4a LINE L1 -165 5956 5804 341 300 183 40 chr17 72406541 72406841 -17097712 + HAL1 LINE L1 53 395 -2112 632 250 76 98 chr17 72406999 72407041 -17097512 + HAL1 LINE L1 788 829 -1678 2116 112 3 10 chr17 72407041 72407336 -17097217 + AluSx SINE Alu 1 293 -19 632 250 76 98 chr17 72407336 72407845 -17096708 + HAL1 LINE L1 829 1327 -1180 541 243 20 20 chr17 72407857 72408005 -17096548 + MER3 DNA MER1_type 1 148 -61 513 254 37 0 chr17 72408011 72408145 -17096408 + L2 LINE L2 2490 2628 -686 442 173 0 25 chr17 72408334 72408415 -17096138 + L1PA15 LINE L1 6079 6157 -8 1412 201 7 7 chr17 72408417 72408691 -17095862 + AluJb SINE Alu 21 294 -18 189 0 0 0 chr17 72408691 72408712 -17095841 + (GA)n Simple_repeat Simple_repeat 2 22 0 271 100 0 25 chr17 72408714 72408746 -17095807 - Tigger1 DNA MER2_type 0 2418 2386 180 0 0 0 chr17 72408746 72408766 -17095787 + (GA)n Simple_repeat Simple_repeat 1 20 0 1129 144 0 28 chr17 72408818 72408999 -17095554 - Tigger1 DNA MER2_type 0 2418 2243 914 174 0 0 chr17 72409006 72409150 -17095403 + FAM SINE Alu 6 149 -36 13246 111 33 62 chr17 72409265 72409610 -17094943 - Tigger1 DNA MER2_type -285 2133 1779 1502 168 9 63 chr17 72409610 72409925 -17094628 + AluJb SINE Alu 3 300 -12 13246 111 33 62 chr17 72409925 72411774 -17092779 - Tigger1 DNA MER2_type -639 1779 3 297 262 184 18 chr17 72412569 72412737 -17091816 + MIR3 SINE MIR 4 199 -9 2175 104 0 29 chr17 72412810 72413119 -17091434 + AluSx SINE Alu 1 300 -12 190 125 0 62 chr17 72413464 72413528 -17091025 + (TTTTC)n Simple_repeat Simple_repeat 4 63 0 193 179 18 18 chr17 72415148 72415176 -17089377 + GA-rich Low_complexity Low_complexity 2 29 -28 2397 76 0 32 chr17 72415176 72415492 -17089061 + AluY SINE Alu 1 306 -5 193 179 18 18 chr17 72415492 72415519 -17089034 + GA-rich Low_complexity Low_complexity 28 57 0 530 239 29 7 chr17 72417472 72417610 -17086943 + L1MB7 LINE L1 2 142 -6400 4672 184 57 34 chr17 72417620 72418510 -17086043 + L1MB7 LINE L1 4641 5509 -1163 2257 80 0 17 chr17 72418510 72418811 -17085742 + AluY SINE Alu 1 296 -15 4672 184 57 34 chr17 72418811 72419197 -17085356 + L1MB7 LINE L1 5509 5956 -716 2070 98 10 46 chr17 72419197 72419504 -17085049 + AluSx SINE Alu 1 296 -16 4672 184 57 34 chr17 72419504 72419695 -17084858 + L1MB7 LINE L1 5956 6141 -531 1153 165 79 34 chr17 72419714 72419981 -17084572 + L1MB7 LINE L1 6379 6657 -25 2497 62 3 0 chr17 72420655 72420963 -17083590 - AluY SINE Alu -1 310 2 21 36 0 0 chr17 72422463 72422491 -17082062 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr17 72424205 72424227 -17080326 + AT_rich Low_complexity Low_complexity 1 22 0 2281 109 0 3 chr17 72424424 72424726 -17079827 - AluSx SINE Alu -11 301 1 983 220 31 0 chr17 72425021 72425212 -17079341 + MER58A DNA MER1_type 28 224 0 358 333 86 6 chr17 72425285 72425447 -17079106 - L2 LINE L2 -209 3063 2889 206 361 54 45 chr17 72427014 72427327 -17077226 - L2 LINE L2 -1054 2260 1945 2382 56 0 3 chr17 72427624 72427909 -17076644 - AluY SINE Alu -19 292 9 4088 253 50 17 chr17 72429491 72430842 -17073711 + L1ME1 LINE L1 1458 2763 -3881 252 0 0 0 chr17 72430842 72430870 -17073683 + (CA)n Simple_repeat Simple_repeat 2 29 0 4088 253 50 17 chr17 72430870 72431214 -17073339 + L1ME1 LINE L1 2763 3094 -3550 2226 101 7 3 chr17 72431214 72431512 -17073041 - AluSq SINE Alu -14 299 1 4088 253 50 17 chr17 72431512 72431856 -17072697 + L1ME1 LINE L1 3094 3525 -3119 3545 194 66 36 chr17 72431871 72431910 -17072643 + L1ME1 LINE L1 4923 4959 -1705 2266 104 0 3 chr17 72431910 72432208 -17072345 - AluSx SINE Alu -15 297 1 3545 194 66 36 chr17 72432208 72432927 -17071626 + L1ME1 LINE L1 4959 5656 -1008 808 169 0 22 chr17 72432927 72433063 -17071490 + FLAM_A SINE Alu 1 133 0 3545 194 66 36 chr17 72433063 72433992 -17070561 + L1ME1 LINE L1 5656 6659 -5 2370 57 0 4 chr17 72434351 72434631 -17069922 - AluY SINE Alu -2 309 31 39 88 0 0 chr17 72436364 72436466 -17068087 + AT_rich Low_complexity Low_complexity 1 102 0 2072 115 10 45 chr17 72436478 72436621 -17067932 + AluSq SINE Alu 1 147 -166 2258 88 0 3 chr17 72436621 72436916 -17067637 + AluY SINE Alu 1 294 -17 2072 115 10 45 chr17 72436916 72437086 -17067467 + AluSq SINE Alu 147 303 -10 22 0 0 0 chr17 72437674 72437696 -17066857 + AT_rich Low_complexity Low_complexity 1 22 0 279 0 0 0 chr17 72438173 72438204 -17066349 + (TG)n Simple_repeat Simple_repeat 2 32 0 585 281 114 4 chr17 72438896 72439177 -17065376 + L1ME LINE L1 5513 5824 -297 540 0 0 0 chr17 72439644 72439704 -17064849 + (TA)n Simple_repeat Simple_repeat 1 60 0 2895 204 35 10 chr17 72440007 72440616 -17063937 + MLT1E2 LTR MaLR 1 624 -2 1728 133 39 7 chr17 72440924 72441046 -17063507 + AluSx SINE Alu 1 118 -194 189 0 0 0 chr17 72441046 72441067 -17063486 + (CA)n Simple_repeat Simple_repeat 2 22 0 1728 133 39 7 chr17 72441067 72441223 -17063330 + AluSx SINE Alu 118 288 -24 458 298 8 8 chr17 72441332 72441456 -17063097 - L2 LINE L2 0 3313 3190 185 294 0 88 chr17 72441609 72441677 -17062876 + L2 LINE L2 3234 3295 -18 1907 131 21 0 chr17 72441923 72442213 -17062340 + AluJb SINE Alu 1 296 -16 189 245 0 0 chr17 72443658 72443707 -17060846 + (TA)n Simple_repeat Simple_repeat 1 49 0 261 240 20 30 chr17 72443711 72443811 -17060742 - L1MC4 LINE L1 -1339 6703 6605 23 101 0 0 chr17 72444139 72444218 -17060335 + AT_rich Low_complexity Low_complexity 1 79 0 1086 163 0 0 chr17 72444518 72444696 -17059857 + L1PB3 LINE L1 5975 6152 -2 31 58 0 0 chr17 72444696 72444748 -17059805 + AT_rich Low_complexity Low_complexity 1 52 0 1548 178 20 34 chr17 72445247 72445545 -17059008 - AluJo SINE Alu -18 294 1 629 224 67 15 chr17 72445936 72446070 -17058483 + MIR SINE MIR 5 145 -117 261 0 0 0 chr17 72446576 72446605 -17057948 + (TG)n Simple_repeat Simple_repeat 2 30 0 659 284 93 13 chr17 72446824 72447049 -17057504 + MIR SINE MIR 20 262 0 1959 146 24 0 chr17 72447877 72448172 -17056381 - AluJb SINE Alu -10 302 1 2258 99 0 3 chr17 72448464 72448756 -17055797 + AluSp SINE Alu 6 296 -17 23 54 0 0 chr17 72448886 72448923 -17055630 + AT_rich Low_complexity Low_complexity 1 37 0 853 225 83 88 chr17 72449751 72450137 -17054416 + L2 LINE L2 2927 3310 -3 3971 149 23 6 chr17 72450648 72451332 -17053221 + L1MB3 LINE L1 5487 6182 -1 284 247 161 0 chr17 72451350 72451431 -17053122 - L3 LINE CR1 -23 1554 1461 521 262 135 75 chr17 72451511 72451858 -17052695 - L3 LINE CR1 -273 1304 937 39 0 0 0 chr17 72453448 72453487 -17051066 + AT_rich Low_complexity Low_complexity 1 39 0 441 299 119 40 chr17 72453888 72454166 -17050387 + L1M4b LINE L1 16 315 -6544 2418 253 48 19 chr17 72454775 72455683 -17048870 + L1M4b LINE L1 1629 2704 -4434 37 39 0 0 chr17 72455770 72455821 -17048732 + AT_rich Low_complexity Low_complexity 1 51 0 968 229 30 76 chr17 72455948 72456122 -17048431 + L1M4b LINE L1 2645 2825 -4132 2155 129 3 0 chr17 72456122 72456416 -17048137 + AluSx SINE Alu 3 297 -15 968 229 30 76 chr17 72456416 72456604 -17047949 + L1M4b LINE L1 2825 2979 -3978 1828 154 0 4 chr17 72456604 72456884 -17047669 + AluJo SINE Alu 23 301 -11 968 229 30 76 chr17 72456884 72457106 -17047447 + L1M4b LINE L1 2979 3210 -3747 25 0 0 0 chr17 72457106 72457131 -17047422 + AT_rich Low_complexity Low_complexity 1 25 0 1787 146 0 14 chr17 72457131 72457418 -17047135 - AluJb SINE Alu -29 283 1 392 220 18 18 chr17 72457418 72457527 -17047026 + L1M4b LINE L1 3197 3305 -3652 1755 176 23 26 chr17 72457683 72457990 -17046563 + AluJo SINE Alu 1 306 -6 23 0 0 0 chr17 72458835 72458858 -17045695 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 72460552 72460573 -17043980 + AT_rich Low_complexity Low_complexity 1 21 0 1898 152 31 22 chr17 72460583 72460905 -17043648 + MER7A DNA MER2_type 1 323 -23 471 270 47 6 chr17 72461197 72461355 -17043198 + L1ME3A LINE L1 5982 6150 -20 236 200 0 0 chr17 72461614 72461664 -17042889 + (TA)n Simple_repeat Simple_repeat 1 50 0 3353 142 214 47 chr17 72461664 72461830 -17042723 + MER21A LTR ERV1 12 149 -782 1643 155 0 22 chr17 72461830 72462107 -17042446 - AluJo SINE Alu -7 305 35 3353 142 214 47 chr17 72462107 72462728 -17041825 + MER21A LTR ERV1 149 931 0 1872 141 33 10 chr17 72464481 72464786 -17039767 - AluJb SINE Alu 0 312 1 973 201 55 46 chr17 72465126 72465345 -17039208 - MER58A DNA MER1_type -1 223 3 183 156 0 0 chr17 72466223 72466255 -17038298 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 2651 260 161 45 chr17 72466313 72466467 -17038086 - L2 LINE L2 -498 2816 2681 663 263 44 24 chr17 72466467 72466672 -17037881 + MER63A DNA MER1_type 2 210 0 2651 260 161 45 chr17 72466672 72467810 -17036743 - L2 LINE L2 -633 2681 1374 383 287 61 0 chr17 72467899 72468014 -17036539 + MIR SINE MIR 108 229 -33 27 22 0 22 chr17 72468487 72468503 -17036050 + AT_rich Low_complexity Low_complexity 1 16 -28 2035 144 0 3 chr17 72468503 72468795 -17035758 + AluSx SINE Alu 1 291 -21 27 22 0 22 chr17 72468795 72468823 -17035730 + AT_rich Low_complexity Low_complexity 16 44 0 945 240 86 81 chr17 72469350 72469934 -17034619 + HAL1 LINE L1 1572 2158 -349 2070 111 0 0 chr17 72469946 72470216 -17034337 + AluSx SINE Alu 35 304 -8 193 192 64 0 chr17 72470269 72470394 -17034159 + (TA)n Simple_repeat Simple_repeat 2 134 0 21 0 0 0 chr17 72470557 72470578 -17033975 + AT_rich Low_complexity Low_complexity 1 21 0 291 291 137 31 chr17 72470688 72471038 -17033515 + L2 LINE L2 1684 2070 -1244 264 255 10 10 chr17 72471038 72471140 -17033413 + L2 LINE L2 2174 2275 -1039 2641 122 41 24 chr17 72471197 72471614 -17032939 + MSTB LTR MaLR 3 426 0 746 203 0 0 chr17 72476492 72476620 -17027933 + FLAM_C SINE Alu 2 129 -14 22 0 0 0 chr17 72477088 72477110 -17027443 + AT_rich Low_complexity Low_complexity 1 22 0 317 274 59 22 chr17 72477411 72477546 -17027007 + MIR SINE MIR 123 262 0 2487 57 0 14 chr17 72477762 72478059 -17026494 - AluY SINE Alu -18 293 1 711 145 34 0 chr17 72478061 72478178 -17026375 - FLAM_C SINE Alu -9 134 14 209 205 0 0 chr17 72478619 72478658 -17025895 + L2 LINE L2 3266 3304 -9 947 142 83 24 chr17 72478773 72478978 -17025575 + L1MB2 LINE L1 5953 6169 -2 189 310 97 55 chr17 72479208 72479353 -17025200 - L2 LINE L2 -558 2756 2606 648 268 30 6 chr17 72479678 72479846 -17024707 + MLT1J1 LTR MaLR 122 293 -153 263 130 22 0 chr17 72479872 72479918 -17024635 + MLT1J2 LTR MaLR 359 405 -45 21 0 0 0 chr17 72480193 72480214 -17024339 + AT_rich Low_complexity Low_complexity 1 21 0 1235 214 41 28 chr17 72480220 72480510 -17024043 + AluJo SINE Alu 7 300 -12 277 226 59 10 chr17 72481142 72481244 -17023309 - MIR SINE MIR -36 226 120 2256 104 14 0 chr17 72482339 72482636 -17021917 - AluSx SINE Alu -11 301 1 2089 133 0 10 chr17 72483167 72483475 -17021078 + AluSx SINE Alu 1 305 -7 1935 205 26 13 chr17 72483598 72483989 -17020564 - MSTD LTR MaLR 0 396 1 2848 228 115 59 chr17 72483989 72484665 -17019888 - MSTD-int LTR MaLR 0 1735 938 1649 102 22 0 chr17 72484665 72484890 -17019663 + AluSg/x SINE Alu 74 303 -9 2333 97 0 0 chr17 72484900 72485199 -17019354 + AluSx SINE Alu 1 299 -13 1909 168 7 0 chr17 72485375 72485685 -17018868 - AluJb SINE Alu 0 312 1 235 289 11 11 chr17 72485842 72485932 -17018621 + MIR SINE MIR 122 211 -51 2287 104 0 3 chr17 72485955 72486252 -17018301 - AluSc SINE Alu -13 296 1 1999 117 13 23 chr17 72486619 72486918 -17017635 - AluSq SINE Alu -13 300 5 193 282 29 10 chr17 72486999 72487102 -17017451 + L2 LINE L2 2104 2208 -1106 871 215 0 0 chr17 72487115 72487273 -17017280 - FRAM SINE Alu -18 158 1 1032 128 0 0 chr17 72487329 72487485 -17017068 - L1PB1 LINE L1 -1 6150 5995 1251 180 5 5 chr17 72487485 72487695 -17016858 + AluJb SINE Alu 89 301 -11 528 107 0 0 chr17 72487707 72487782 -17016771 - Tigger3(Golem) DNA MER2_type -712 2317 2243 212 226 35 52 chr17 72487897 72487972 -17016581 + A-rich Low_complexity Low_complexity 4 78 -38 2434 71 7 0 chr17 72487972 72488268 -17016285 + AluSp SINE Alu 1 298 -15 212 226 35 52 chr17 72488268 72488307 -17016246 + A-rich Low_complexity Low_complexity 78 116 0 24 0 0 0 chr17 72488900 72488924 -17015629 + AT_rich Low_complexity Low_complexity 1 24 0 2243 129 0 7 chr17 72489111 72489420 -17015133 + AluJb SINE Alu 1 307 -5 269 299 28 9 chr17 72489429 72489536 -17015017 + L1MC4a LINE L1 5816 5924 -1884 2234 70 4 0 chr17 72489605 72489877 -17014676 + AluY SINE Alu 18 290 -21 1127 219 48 62 chr17 72489878 72490170 -17014383 - LTR2 LTR ERV1 -96 353 66 2534 137 19 2 chr17 72490270 72490680 -17013873 + MER57B LTR ERV1 18 434 0 2348 89 0 16 chr17 72490830 72491133 -17013420 + AluSx SINE Alu 2 299 -13 3318 201 64 32 chr17 72491878 72492684 -17011869 - L1MD2 LINE L1 -240 6119 5275 2412 92 3 0 chr17 72492684 72492989 -17011564 - AluSc SINE Alu 0 309 4 3318 201 64 32 chr17 72492989 72493162 -17011391 - L1MD2 LINE L1 -1084 5275 5109 1813 137 0 4 chr17 72493400 72493670 -17010883 + AluSx SINE Alu 37 305 0 2715 181 30 21 chr17 72493675 72493873 -17010680 + L1MB2 LINE L1 5605 5800 -371 1512 147 88 18 chr17 72493873 72494146 -17010407 - AluJo SINE Alu -20 292 1 2715 181 30 21 chr17 72494146 72494509 -17010044 + L1MB2 LINE L1 5800 6171 0 2256 95 3 13 chr17 72494522 72494827 -17009726 + AluSx SINE Alu 1 302 -10 1505 268 61 29 chr17 72494857 72495612 -17008941 + L1M4 LINE L1 2346 3124 -3022 891 198 24 68 chr17 72495719 72495926 -17008627 - AluJo SINE Alu -114 198 1 474 171 18 27 chr17 72495927 72496038 -17008515 - L1MC4 LINE L1 -194 7848 7739 1327 165 67 4 chr17 72496050 72496317 -17008236 - L1MC4 LINE L1 -470 7572 7289 2150 128 0 3 chr17 72496317 72496630 -17007923 + AluSx SINE Alu 1 312 0 677 200 0 0 chr17 72496700 72496820 -17007733 + 5S rRNA rRNA 1 120 -1 2220 97 7 3 chr17 72497328 72497616 -17006937 - AluSx SINE Alu -23 289 1 1185 109 6 0 chr17 72497726 72497882 -17006671 + AluSq SINE Alu 1 157 -156 2025 118 3 11 chr17 72497982 72498269 -17006284 + AluSx SINE Alu 17 301 -11 283 247 0 39 chr17 72498270 72498347 -17006206 - Charlie1 DNA MER1_type -2687 74 1 198 0 0 0 chr17 72498360 72498382 -17006171 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 1920 140 10 10 chr17 72498516 72498823 -17005730 - AluSx SINE Alu -5 307 1 1619 158 43 31 chr17 72498953 72499095 -17005458 - L1MC1 LINE L1 -6 6327 6188 4262 127 6 20 chr17 72499095 72499739 -17004814 + MER41B LTR ERV1 1 635 0 1619 158 43 31 chr17 72499739 72499919 -17004634 - L1MC1 LINE L1 -145 6188 6001 2400 90 7 0 chr17 72500005 72500305 -17004248 - AluSx SINE Alu -10 302 1 2056 116 3 10 chr17 72500459 72500752 -17003801 + AluSx SINE Alu 17 307 -5 682 242 81 10 chr17 72500752 72500950 -17003603 - MLT1C LTR MaLR -55 412 201 1788 166 0 27 chr17 72500981 72501276 -17003277 - AluJo SINE Alu -20 292 6 1805 132 7 29 chr17 72501338 72501619 -17002934 - AluSx SINE Alu -37 275 1 202 270 0 32 chr17 72501625 72501688 -17002865 + L2 LINE L2 3134 3194 -78 195 42 0 0 chr17 72502015 72502039 -17002514 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1892 144 0 0 chr17 72502044 72502315 -17002238 - AluSq SINE Alu -42 271 1 329 83 0 0 chr17 72502317 72502365 -17002188 - Alu SINE Alu -2 306 259 1067 107 7 13 chr17 72502705 72502854 -17001699 - AluSg1 SINE Alu -161 148 1 755 195 32 41 chr17 72502854 72502984 -17001569 + Charlie1b DNA MER1_type 115 245 -2516 2153 114 10 0 chr17 72502984 72503273 -17001280 + AluSg SINE Alu 1 292 -18 755 195 32 41 chr17 72503273 72503467 -17001086 + Charlie1b DNA MER1_type 245 523 0 525 230 81 57 chr17 72503467 72503674 -17000879 - MLT1L LTR MaLR -54 561 350 2299 102 13 0 chr17 72503755 72503881 -17000672 + AluSx SINE Alu 1 124 -188 336 64 0 0 chr17 72503881 72503928 -17000625 + (CA)n Simple_repeat Simple_repeat 2 48 0 2299 102 13 0 chr17 72503928 72504106 -17000447 + AluSx SINE Alu 124 309 -3 1434 102 0 5 chr17 72504117 72504303 -17000250 + AluSg/x SINE Alu 109 293 -17 1014 164 12 90 chr17 72504311 72504555 -16999998 + L1MB3 LINE L1 5958 6182 -1 1409 134 130 33 chr17 72504664 72504940 -16999613 + AluJb SINE Alu 1 303 -9 1984 141 0 0 chr17 72504951 72505227 -16999326 + AluSx SINE Alu 21 296 -16 354 23 0 0 chr17 72505444 72505487 -16999066 + (CA)n Simple_repeat Simple_repeat 1 43 0 379 200 47 0 chr17 72505981 72506083 -16998470 - L1ME1 LINE L1 0 6184 6070 1227 322 49 38 chr17 72506138 72506266 -16998287 - HERV16 LTR ERVL -1939 3057 2932 2206 104 44 0 chr17 72506266 72506563 -16997990 + AluSg SINE Alu 1 310 0 1227 322 49 38 chr17 72506563 72507220 -16997333 - HERV16 LTR ERVL -2064 2932 2254 1382 0 0 0 chr17 72507243 72507394 -16997159 + L1HS LINE L1 6005 6155 0 180 0 0 0 chr17 72507394 72507414 -16997139 + (A)n Simple_repeat Simple_repeat 1 20 0 193 336 32 24 chr17 72508039 72508164 -16996389 - L2 LINE L2 -223 3049 2924 2081 117 3 0 chr17 72508436 72508746 -16995807 + AluSp SINE Alu 1 311 0 1611 131 15 4 chr17 72508779 72509038 -16995515 - AluSx SINE Alu -16 296 35 1574 195 42 82 chr17 72510130 72510239 -16994314 - LTR2 LTR ERV1 0 449 337 2396 59 7 0 chr17 72510239 72510527 -16994026 + AluY SINE Alu 1 290 -21 1574 195 42 82 chr17 72510527 72510843 -16993710 - LTR2 LTR ERV1 -112 337 41 1985 161 0 0 chr17 72511026 72511324 -16993229 + AluJb SINE Alu 1 298 -14 2396 97 0 0 chr17 72511347 72511646 -16992907 + AluSx SINE Alu 7 305 -7 256 201 229 56 chr17 72511975 72512119 -16992434 - MLT1H LTR MaLR -4 545 377 230 256 0 47 chr17 72512282 72512368 -16992185 - MLT1E LTR MaLR -487 106 25 252 86 0 0 chr17 72512371 72512406 -16992147 + (TTA)n Simple_repeat Simple_repeat 2 36 0 329 83 0 0 chr17 72512646 72512694 -16991859 + Alu SINE Alu 259 306 -2 1855 148 0 0 chr17 72512696 72512966 -16991587 + AluSq SINE Alu 1 270 -43 202 270 0 32 chr17 72513326 72513389 -16991164 - L2 LINE L2 -78 3194 3134 2374 80 7 0 chr17 72513395 72513696 -16990857 + AluSp SINE Alu 1 303 -10 2047 110 0 3 chr17 72514001 72514283 -16990270 + AluSx SINE Alu 30 310 -2 750 168 56 0 chr17 72514284 72514445 -16990108 + L1MB5 LINE L1 5723 5892 -282 2275 105 3 0 chr17 72514557 72514853 -16989700 - AluSq SINE Alu -16 297 1 2188 119 0 0 chr17 72514856 72515149 -16989404 - AluSx SINE Alu -19 293 1 2019 125 21 3 chr17 72515149 72515437 -16989116 - AluSq SINE Alu -20 293 1 2184 119 0 0 chr17 72515695 72515988 -16988565 + AluSx SINE Alu 1 293 -19 2293 102 6 13 chr17 72515991 72516306 -16988247 + AluSq SINE Alu 1 313 0 1676 155 55 3 chr17 72516629 72516920 -16987633 - AluJb SINE Alu -6 306 1 2223 114 0 3 chr17 72517467 72517766 -16986787 + AluSq SINE Alu 1 298 -15 181 173 13 13 chr17 72517779 72517854 -16986699 + (TA)n Simple_repeat Simple_repeat 2 76 0 492 150 12 0 chr17 72517859 72517939 -16986614 - AluS SINE Alu -231 82 2 675 133 0 47 chr17 72517940 72518068 -16986485 - AluJb SINE Alu -3 309 188 5372 97 96 122 chr17 72518068 72519624 -16984929 + pTR5 LTR ERV1 745 2438 0 882 209 21 11 chr17 72519627 72519818 -16984735 - AluJb SINE Alu -119 193 1 596 196 196 24 chr17 72519837 72520005 -16984548 + AluJo SINE Alu 90 286 -26 268 147 27 0 chr17 72520009 72520084 -16984469 + (TA)n Simple_repeat Simple_repeat 2 78 0 1947 116 7 11 chr17 72520084 72520369 -16984184 - AluSg SINE Alu -26 284 1 324 282 51 26 chr17 72520470 72520587 -16983966 + MIR3 SINE MIR 86 205 -3 2539 40 0 0 chr17 72520973 72521275 -16983278 + AluY SINE Alu 1 302 -9 1360 245 37 78 chr17 72521363 72521460 -16983093 - MER20B DNA MER1_type 0 783 684 1127 109 58 0 chr17 72521460 72521634 -16982919 + L1PA11 LINE L1 5991 6174 0 1360 245 37 78 chr17 72521634 72522026 -16982527 - MER20B DNA MER1_type -99 684 314 1306 107 0 56 chr17 72522050 72522192 -16982361 + AluSx SINE Alu 1 129 -183 2071 94 10 7 chr17 72522192 72522490 -16982063 + AluSc SINE Alu 1 299 -10 1306 107 0 56 chr17 72522490 72522562 -16981991 + AluSx SINE Alu 129 203 -109 296 156 0 0 chr17 72522565 72522610 -16981943 + AluJb SINE Alu 72 116 -186 1102 166 0 60 chr17 72522930 72522972 -16981581 + AluJb SINE Alu 104 147 -165 2096 119 0 0 chr17 72522972 72523267 -16981286 + AluSx SINE Alu 1 295 -17 1102 166 0 60 chr17 72523267 72523441 -16981112 + AluJb SINE Alu 147 307 -5 2083 108 3 3 chr17 72523444 72523749 -16980804 + AluSg SINE Alu 1 305 -5 2061 124 3 10 chr17 72523754 72524061 -16980492 + AluSx SINE Alu 3 307 -5 243 139 114 139 chr17 72524082 72524132 -16980421 - MER20B DNA MER1_type -493 290 241 2113 146 144 28 chr17 72524132 72524590 -16979963 - MLT2B2 LTR ERVL -4 511 1 243 139 114 139 chr17 72524590 72524618 -16979935 - MER20B DNA MER1_type -542 241 214 1028 168 0 22 chr17 72524618 72524803 -16979750 + AluJb SINE Alu 1 181 -131 423 0 0 0 chr17 72524835 72524882 -16979671 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 248 191 0 0 chr17 72524914 72524956 -16979597 - MER20B DNA MER1_type -493 290 249 526 148 229 25 chr17 72524959 72525081 -16979472 - MLT2B2 LTR ERVL 0 515 369 28 29 0 0 chr17 72525081 72525116 -16979437 + AT_rich Low_complexity Low_complexity 1 35 0 2130 86 40 3 chr17 72525172 72525473 -16979080 - AluSp SINE Alu -1 312 1 867 148 181 6 chr17 72525477 72525659 -16978894 - AluJo SINE Alu -12 300 87 2219 95 0 3 chr17 72525673 72525969 -16978584 - AluSc SINE Alu -12 297 3 2009 91 14 7 chr17 72526618 72526904 -16977649 - AluSc SINE Alu -21 288 1 1821 141 38 7 chr17 72527501 72527792 -16976761 - AluJb SINE Alu -12 300 1 1712 138 37 0 chr17 72528164 72528433 -16976120 + AluSx SINE Alu 21 299 -13 1158 227 56 102 chr17 72528433 72528971 -16975582 + L1MD2 LINE L1 5843 6355 -4 29 0 0 0 chr17 72528981 72529010 -16975543 + AT_rich Low_complexity Low_complexity 1 29 0 1625 160 0 72 chr17 72529052 72529384 -16975169 + AluJo SINE Alu 1 308 -4 479 160 0 10 chr17 72529395 72529495 -16975058 + GA-rich Low_complexity Low_complexity 4 102 0 2083 103 3 0 chr17 72529732 72530037 -16974516 + AluSx SINE Alu 1 306 0 331 246 64 27 chr17 72530100 72530210 -16974343 + MIR SINE MIR 41 154 -108 1525 195 0 36 chr17 72530349 72530656 -16973897 + AluJo SINE Alu 1 296 -6 2088 99 21 0 chr17 72531057 72531340 -16973213 + AluSc SINE Alu 1 289 -20 347 232 128 67 chr17 72531687 72531984 -16972569 + L1MC5 LINE L1 7611 7925 -36 2131 112 7 0 chr17 72531994 72532289 -16972264 + AluSx SINE Alu 1 297 -15 188 81 81 0 chr17 72532290 72532327 -16972226 + GA-rich Low_complexity Low_complexity 1 40 0 1746 99 28 0 chr17 72532498 72532751 -16971802 + AluSx SINE Alu 44 303 -9 414 284 53 12 chr17 72533134 72533303 -16971250 - L1ME LINE L1 -344 5777 5602 822 286 128 29 chr17 72533574 72533757 -16970796 + L1MC4a LINE L1 5392 5556 -2252 2243 93 0 0 chr17 72533757 72534058 -16970495 + AluSc SINE Alu 1 301 -8 822 286 128 29 chr17 72534058 72534329 -16970224 + L1MC4a LINE L1 5556 5891 -1917 2139 101 0 0 chr17 72534671 72534957 -16969596 - AluSx SINE Alu -2 310 25 360 262 33 41 chr17 72535092 72535214 -16969339 + L1ME3A LINE L1 4941 5061 -1085 2146 79 0 57 chr17 72535258 72535573 -16968980 - AluSc SINE Alu -12 297 1 1528 251 54 26 chr17 72535631 72536395 -16968158 + L1ME3A LINE L1 5026 5811 -351 1677 146 24 7 chr17 72536406 72536694 -16967859 + AluSx SINE Alu 12 304 -8 285 289 108 36 chr17 72536743 72536937 -16967616 + L1ME3A LINE L1 5962 6169 -1 1995 96 7 0 chr17 72536948 72537260 -16967293 + AluSg1 SINE Alu 6 319 0 1848 129 13 10 chr17 72537263 72537566 -16966987 + AluY SINE Alu 1 304 -7 402 227 0 0 chr17 72537768 72537900 -16966653 + (TG)n Simple_repeat Simple_repeat 1 132 0 234 105 0 0 chr17 72537952 72537990 -16966563 + (TG)n Simple_repeat Simple_repeat 1 38 0 332 299 34 3 chr17 72538273 72538383 -16966170 + MIR SINE MIR 35 152 -62 2260 107 0 0 chr17 72538398 72538707 -16965846 + AluSg SINE Alu 1 309 -1 292 258 16 0 chr17 72539334 72539346 -16965207 + GA-rich Low_complexity Low_complexity 2 12 -115 2116 97 3 0 chr17 72539346 72539634 -16964919 + AluSx SINE Alu 1 289 -23 292 258 16 0 chr17 72539634 72539714 -16964839 + GA-rich Low_complexity Low_complexity 12 99 -28 2249 92 0 19 chr17 72539714 72540030 -16964523 + AluSg SINE Alu 1 310 0 292 258 16 0 chr17 72540030 72540060 -16964493 + GA-rich Low_complexity Low_complexity 99 127 0 2075 109 3 31 chr17 72540958 72541092 -16963461 + AluSx SINE Alu 1 137 -175 2273 87 10 0 chr17 72541092 72541401 -16963152 + AluSx SINE Alu 1 312 0 2148 109 3 3 chr17 72541403 72541707 -16962846 + AluSp SINE Alu 1 304 -9 2075 109 3 31 chr17 72541707 72541890 -16962663 + AluSx SINE Alu 138 312 0 2471 91 17 0 chr17 72542142 72542494 -16962059 + L1PA13 LINE L1 5804 6161 -2 289 0 49 0 chr17 72543130 72543171 -16961382 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 2047 98 0 0 chr17 72543174 72543449 -16961104 - AluSx SINE Alu -37 275 1 1870 146 10 0 chr17 72543515 72543823 -16960730 - AluJb SINE Alu -1 311 1 318 155 309 0 chr17 72544093 72544177 -16960376 + MLT1J LTR MaLR 24 133 -378 2111 115 20 0 chr17 72544661 72544966 -16959587 - AluSx SINE Alu -1 311 1 2029 111 10 7 chr17 72545496 72545793 -16958760 - AluSx SINE Alu -14 298 1 1796 153 3 3 chr17 72546246 72546534 -16958019 + AluJb SINE Alu 1 288 -24 269 159 0 0 chr17 72546535 72546579 -16957974 + AluSx SINE Alu 1 44 -258 1769 130 8 0 chr17 72546693 72546954 -16957599 + AluSx SINE Alu 49 311 -1 1953 118 0 10 chr17 72547224 72547544 -16957009 + AluSx SINE Alu 1 317 0 1738 146 0 0 chr17 72547555 72547848 -16956705 + AluSx SINE Alu 16 308 0 2237 81 3 0 chr17 72547992 72548287 -16956266 + AluSp SINE Alu 3 298 -15 2233 75 3 3 chr17 72548371 72548664 -16955889 + AluY SINE Alu 5 297 -14 605 217 123 25 chr17 72548718 72548953 -16955600 + LTR37B LTR ERV1 198 455 -13 2369 68 0 0 chr17 72548964 72549259 -16955294 + AluSg1 SINE Alu 2 296 -13 1638 181 7 10 chr17 72549259 72549562 -16954991 - L1MB5 LINE L1 -9 6165 5864 271 215 172 32 chr17 72549614 72549627 -16954926 - L1MB5 LINE L1 -294 5884 5874 1717 178 10 7 chr17 72549627 72549936 -16954617 - AluJb SINE Alu -2 310 1 271 215 172 32 chr17 72549936 72550015 -16954538 - L1MB5 LINE L1 -304 5874 5779 2230 91 3 0 chr17 72550017 72550315 -16954238 - AluSx SINE Alu -13 299 1 2121 120 0 3 chr17 72550614 72550923 -16953630 - AluSx SINE Alu -4 308 1 2095 117 0 10 chr17 72551208 72551515 -16953038 - AluSg SINE Alu -6 304 1 1989 116 7 3 chr17 72551679 72551973 -16952580 - AluSx SINE Alu -17 295 1 1534 148 35 45 chr17 72552400 72552690 -16951863 + AluJo SINE Alu 1 287 -25 2106 99 0 0 chr17 72552701 72553004 -16951549 + AluSx SINE Alu 1 303 0 2283 64 0 0 chr17 72553034 72553353 -16951200 + AluY SINE Alu 1 319 0 301 215 38 13 chr17 72553456 72553535 -16951018 + L1MD3 LINE L1 7903 7983 -12 2269 183 23 82 chr17 72553546 72553637 -16950916 + L1MB4 LINE L1 5644 5739 -441 2299 100 0 0 chr17 72553637 72553947 -16950606 + AluSx SINE Alu 1 310 -2 2269 183 23 82 chr17 72553947 72554285 -16950268 + L1MB4 LINE L1 5739 6095 -85 2264 61 27 0 chr17 72554285 72554579 -16949974 + AluSp SINE Alu 1 302 -11 2269 183 23 82 chr17 72554579 72554668 -16949885 + L1MB4 LINE L1 6095 6130 -50 2222 106 0 0 chr17 72554668 72554970 -16949583 + AluSp SINE Alu 3 304 -9 2269 183 23 82 chr17 72554970 72555012 -16949541 + L1MB4 LINE L1 6130 6173 -7 1383 184 28 25 chr17 72555039 72555128 -16949425 - AluJb SINE Alu -20 292 205 3142 154 9 75 chr17 72555128 72555154 -16949399 + LTR9 LTR ERV1 2 28 -584 2014 104 22 0 chr17 72555154 72555455 -16949098 + AluSx SINE Alu 1 307 0 3142 154 9 75 chr17 72555455 72556081 -16948472 + LTR9 LTR ERV1 28 612 0 1383 184 28 25 chr17 72556081 72556274 -16948279 - AluJb SINE Alu -107 205 9 610 299 30 0 chr17 72556541 72556705 -16947848 + LTR16A LTR ERVL 268 436 -14 2358 269 120 107 chr17 72556736 72556925 -16947628 + HERV16 LTR ERVL 1 186 -4810 2106 114 18 99 chr17 72556925 72557138 -16947415 - THE1B LTR MaLR -2 362 194 2206 91 0 0 chr17 72557138 72557424 -16947129 - AluSg SINE Alu -24 286 1 2106 114 18 99 chr17 72557424 72557604 -16946949 - THE1B LTR MaLR -170 194 1 11056 90 37 23 chr17 72557604 72559163 -16945390 - THE1B-int LTR MaLR 0 1580 1 2061 119 43 62 chr17 72559163 72559236 -16945317 - THE1B LTR MaLR 0 364 291 2172 123 0 0 chr17 72559236 72559537 -16945016 + AluSx SINE Alu 1 301 -11 2061 119 43 62 chr17 72559537 72559834 -16944719 - THE1B LTR MaLR -73 291 1 2358 269 120 107 chr17 72559834 72559873 -16944680 + HERV16 LTR ERVL 186 223 -4773 2057 96 3 60 chr17 72559873 72560205 -16944348 + AluSq SINE Alu 1 313 0 2358 269 120 107 chr17 72560205 72560564 -16943989 + HERV16 LTR ERVL 223 576 -4420 2127 98 40 0 chr17 72560564 72560861 -16943692 + AluY SINE Alu 1 309 -2 2358 269 120 107 chr17 72560861 72561205 -16943348 + HERV16 LTR ERVL 576 914 -4082 1399 157 85 111 chr17 72561205 72561665 -16942888 - LTR7 LTR ERV1 -2 448 1 1729 219 36 28 chr17 72561669 72562062 -16942491 - MSTD LTR MaLR 0 396 1 2358 269 120 107 chr17 72562062 72562231 -16942322 + HERV16 LTR ERVL 916 1081 -3915 439 100 43 0 chr17 72562231 72562301 -16942252 + LTR5 LTR ERVK 1 73 -896 6307 88 2 3 chr17 72562301 72563157 -16941396 + LTR5 LTR ERVK 115 969 0 2358 269 120 107 chr17 72563157 72563496 -16941057 + HERV16 LTR ERVL 1081 1414 -3582 2136 118 10 0 chr17 72563496 72563801 -16940752 + AluSx SINE Alu 1 308 -4 2358 269 120 107 chr17 72563801 72564309 -16940244 + HERV16 LTR ERVL 1414 2065 -2931 2353 88 0 0 chr17 72564309 72564616 -16939937 + AluSc SINE Alu 1 307 -2 2358 269 120 107 chr17 72564616 72564781 -16939772 + HERV16 LTR ERVL 2065 2226 -2770 261 0 0 0 chr17 72564795 72564824 -16939729 + (T)n Simple_repeat Simple_repeat 1 29 0 521 240 20 27 chr17 72564824 72564974 -16939579 - LTR28 LTR ERV1 -515 505 357 315 0 0 0 chr17 72565066 72565101 -16939452 + (T)n Simple_repeat Simple_repeat 1 35 0 1799 144 3 10 chr17 72565213 72565512 -16939041 + AluSx SINE Alu 1 297 -15 416 332 148 29 chr17 72565908 72566321 -16938232 + L2 LINE L2 2252 2713 -601 328 338 17 129 chr17 72566356 72566493 -16938060 + L2 LINE L2 2852 3003 -269 2048 98 0 3 chr17 72566493 72566803 -16937750 - AluSq SINE Alu 0 309 1 328 338 17 129 chr17 72566803 72567138 -16937415 + L2 LINE L2 3003 3272 0 1979 123 13 3 chr17 72567275 72567577 -16936976 - AluJo SINE Alu -7 305 1 21 57 0 0 chr17 72568867 72568902 -16935651 + AT_rich Low_complexity Low_complexity 1 35 0 709 165 0 0 chr17 72569003 72569109 -16935444 - FRAM SINE Alu -32 144 42 2227 114 7 0 chr17 72569187 72569493 -16935060 + AluSq SINE Alu 1 308 -5 480 206 20 0 chr17 72569898 72570000 -16934553 + MER58C DNA MER1_type 112 215 0 524 253 125 28 chr17 72570748 72571068 -16933485 - L1ME4a LINE L1 -3 6118 5768 1538 164 10 31 chr17 72571224 72571516 -16933037 + AluJb SINE Alu 1 286 -26 1380 173 105 11 chr17 72571646 72571923 -16932630 - AluJo SINE Alu -9 303 1 29 47 0 0 chr17 72572084 72572127 -16932426 + AT_rich Low_complexity Low_complexity 1 43 0 210 352 130 9 chr17 72573015 72573123 -16931430 + L2 LINE L2 3147 3267 -5 222 318 76 0 chr17 72573126 72573192 -16931361 - L2 LINE L2 -50 3222 3152 22 80 0 0 chr17 72573637 72573687 -16930866 + AT_rich Low_complexity Low_complexity 1 50 0 803 181 0 0 chr17 72574872 72575005 -16929548 + FLAM_C SINE Alu 1 133 0 1912 135 3 17 chr17 72575132 72575267 -16929286 + AluSx SINE Alu 1 136 -170 2202 98 3 7 chr17 72575267 72575572 -16928981 + AluY SINE Alu 2 305 -6 1912 135 3 17 chr17 72575572 72575746 -16928807 + AluSx SINE Alu 136 306 0 373 155 0 0 chr17 72576166 72576237 -16928316 + L1MA3 LINE L1 6235 6305 0 2075 134 0 10 chr17 72576830 72577129 -16927424 + AluSx SINE Alu 1 296 -16 181 381 0 0 chr17 72577628 72577691 -16926862 + L2 LINE L2 3202 3264 -8 1803 151 0 57 chr17 72579187 72579520 -16925033 + AluJo SINE Alu 1 316 0 27 0 0 0 chr17 72579585 72579612 -16924941 + AT_rich Low_complexity Low_complexity 1 27 0 181 56 28 28 chr17 72580806 72580842 -16923711 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 487 318 120 9 chr17 72580918 72581135 -16923418 - MIR SINE MIR -1 261 21 27 0 0 0 chr17 72581303 72581330 -16923223 + AT_rich Low_complexity Low_complexity 1 27 0 1097 198 28 0 chr17 72581582 72581794 -16922759 + MER58A DNA MER1_type 1 218 -6 2341 88 0 7 chr17 72585368 72585676 -16918877 - AluSg1 SINE Alu -1 308 3 616 138 106 57 chr17 72585693 72585816 -16918737 - AluSq/x SINE Alu -183 129 1 224 279 353 0 chr17 72585884 72586020 -16918533 - L2 LINE L2 -1 3312 3129 1918 145 3 0 chr17 72586137 72586427 -16918126 + AluSx SINE Alu 1 291 -21 1461 75 5 5 chr17 72587185 72587372 -16917181 - AluSq SINE Alu -19 294 108 327 287 155 35 chr17 72587580 72587754 -16916799 - MIR3 SINE MIR -9 199 5 1399 125 9 26 chr17 72587856 72588088 -16916465 - AluSg/x SINE Alu -1 311 84 2151 128 0 0 chr17 72588092 72588390 -16916163 - AluSx SINE Alu -14 298 1 22 35 0 0 chr17 72588398 72588427 -16916126 + AT_rich Low_complexity Low_complexity 1 29 0 366 210 186 24 chr17 72588433 72588557 -16915996 - L1MC5 LINE L1 -54 7907 7764 2155 137 0 7 chr17 72588779 72589085 -16915468 + AluJb SINE Alu 9 312 0 2125 133 3 3 chr17 72589146 72589454 -16915099 + AluSg SINE Alu 1 308 -2 284 251 91 21 chr17 72590515 72590628 -16913925 + MIR SINE MIR 37 156 -52 190 283 65 0 chr17 72590654 72590700 -16913853 + L2 LINE L2 3208 3256 -16 203 366 0 30 chr17 72590848 72590949 -16913604 + L3 LINE CR1 1479 1576 -1 2465 93 3 0 chr17 72591550 72591862 -16912691 - AluSq SINE Alu 0 313 1 281 250 14 42 chr17 72592179 72592251 -16912302 + L2 LINE L2 3200 3269 -3 531 213 0 0 chr17 72592253 72592394 -16912159 + (TGGA)n Simple_repeat Simple_repeat 1 141 0 380 321 76 55 chr17 72592397 72592687 -16911866 + L2 LINE L2 2313 2608 -706 2120 137 45 28 chr17 72592759 72593117 -16911436 + THE1B LTR MaLR 1 364 0 187 194 0 0 chr17 72593307 72593343 -16911210 + L2 LINE L2 3221 3256 -16 21 36 0 0 chr17 72594682 72594710 -16909843 + AT_rich Low_complexity Low_complexity 1 28 0 512 42 0 167 chr17 72594883 72594921 -16909632 + MADE1 DNA Mariner 1 15 -65 2326 107 0 0 chr17 72594921 72595221 -16909332 - AluSx SINE Alu -10 302 3 512 42 0 167 chr17 72595221 72595278 -16909275 + MADE1 DNA Mariner 15 80 0 450 343 59 59 chr17 72595525 72595849 -16908704 + L2 LINE L2 2930 3253 -19 1891 128 26 26 chr17 72596166 72596470 -16908083 + AluJb SINE Alu 1 304 -8 21 0 0 0 chr17 72597743 72597764 -16906789 + AT_rich Low_complexity Low_complexity 1 21 0 864 203 18 6 chr17 72598059 72598222 -16906331 + FAM SINE Alu 2 166 -9 2019 137 10 0 chr17 72598560 72598860 -16905693 + AluJb SINE Alu 9 311 -1 27 29 0 0 chr17 72599878 72599912 -16904641 + AT_rich Low_complexity Low_complexity 1 34 0 404 270 140 15 chr17 72600155 72600355 -16904198 - L1ME4a LINE L1 -220 5901 5677 385 250 134 9 chr17 72600641 72600753 -16903800 + MIR SINE MIR 86 211 -51 2375 71 10 0 chr17 72600756 72601050 -16903503 + AluSq SINE Alu 2 298 -15 338 303 78 0 chr17 72601089 72601231 -16903322 + MIR SINE MIR 100 252 -10 3986 253 98 54 chr17 72602620 72604417 -16900136 + L2 LINE L2 1266 3155 -158 2153 114 6 25 chr17 72604417 72604733 -16899820 - AluSg SINE Alu 0 310 1 3986 253 98 54 chr17 72604733 72604900 -16899653 + L2 LINE L2 3155 3313 0 297 241 175 58 chr17 72605821 72605958 -16898595 - L2 LINE L2 0 3313 3161 1688 167 0 30 chr17 72606994 72607293 -16897260 - AluJb SINE Alu -22 290 1 764 193 88 31 chr17 72607649 72607841 -16896712 - MER20 DNA MER1_type -15 204 2 793 260 70 0 chr17 72608033 72608275 -16896278 + MIR SINE MIR 3 261 -1 1489 173 26 23 chr17 72608334 72608641 -16895912 - AluJo SINE Alu -4 308 1 2418 51 0 42 chr17 72609466 72609777 -16894776 + AluY SINE Alu 1 298 -13 2346 91 0 3 chr17 72609969 72610266 -16894287 + AluSx SINE Alu 1 296 -16 582 236 151 60 chr17 72610557 72610993 -16893560 + MLT1K LTR MaLR 1 476 0 786 202 101 48 chr17 72611652 72611900 -16892653 - MIR SINE MIR 0 262 2 510 191 48 24 chr17 72612310 72612478 -16892075 + L1ME LINE L1 5109 5280 -866 1901 122 0 0 chr17 72612483 72612737 -16891816 + AluSc SINE Alu 4 257 -52 1188 48 14 7 chr17 72612840 72612985 -16891568 - AluY SINE Alu -165 146 1 408 334 153 18 chr17 72613074 72613412 -16891141 + L1ME LINE L1 5325 5712 -409 1396 102 233 13 chr17 72613983 72614219 -16890334 + AluSg1 SINE Alu 1 288 -21 218 222 16 0 chr17 72614223 72614286 -16890267 + (TTTA)n Simple_repeat Simple_repeat 1 64 0 2214 114 3 0 chr17 72614632 72614931 -16889622 + AluSq SINE Alu 1 300 -13 2249 111 0 19 chr17 72614989 72615305 -16889248 + AluSg SINE Alu 1 310 0 25 0 0 28 chr17 72615305 72615325 -16889228 + AT_rich Low_complexity Low_complexity 1 21 -14 2251 92 0 14 chr17 72615325 72615619 -16888934 + AluSq SINE Alu 1 290 -23 25 0 0 28 chr17 72615619 72615634 -16888919 + AT_rich Low_complexity Low_complexity 21 35 0 409 278 0 0 chr17 72616618 72616708 -16887845 + MIR3 SINE MIR 69 158 -50 359 294 159 18 chr17 72616718 72616888 -16887665 + MIR SINE MIR 20 213 -49 2343 83 20 3 chr17 72619059 72619361 -16885192 + AluSq SINE Alu 1 307 -6 254 135 39 0 chr17 72619371 72619423 -16885130 + (CATA)n Simple_repeat Simple_repeat 3 56 0 315 287 23 0 chr17 72619434 72619521 -16885032 - L1MC4 LINE L1 -1339 6703 6615 23 0 0 0 chr17 72619566 72619589 -16884964 + AT_rich Low_complexity Low_complexity 1 23 0 28 61 0 0 chr17 72621924 72621973 -16882580 + GC_rich Low_complexity Low_complexity 1 49 0 30 77 0 0 chr17 72622156 72622221 -16882332 + GC_rich Low_complexity Low_complexity 1 65 0 27 49 0 0 chr17 72622892 72622933 -16881620 + GC_rich Low_complexity Low_complexity 1 41 0 269 118 78 0 chr17 72624062 72624113 -16880440 - MADE1 DNA Mariner -25 55 1 360 342 121 26 chr17 72624247 72624560 -16879993 + L2 LINE L2 2557 2899 -415 1946 122 17 3 chr17 72624588 72624876 -16879677 - AluSg1 SINE Alu -17 292 1 2361 83 3 0 chr17 72624985 72625287 -16879266 + AluSp SINE Alu 1 303 -10 1629 122 37 4 chr17 72625592 72625866 -16878687 + AluSx SINE Alu 30 311 0 23 0 0 0 chr17 72625936 72625959 -16878594 + AT_rich Low_complexity Low_complexity 1 23 0 1838 164 0 0 chr17 72676004 72676354 -16828199 - AluSx SINE Alu 0 350 1 2128 103 3 0 chr17 72676521 72676823 -16827730 - AluSp SINE Alu -10 303 1 2022 123 0 0 chr17 72677105 72677405 -16827148 - AluSx SINE Alu -12 300 1 314 76 39 2 chr17 72677673 72677732 -16826821 - Alu SINE Alu 0 300 246 395 131 0 0 chr17 72678150 72678211 -16826342 + FRAM SINE Alu 40 100 -66 1946 111 31 3 chr17 72678944 72679233 -16825320 + AluSx SINE Alu 6 302 -10 683 147 54 23 chr17 72679262 72679391 -16825162 + AluJo SINE Alu 5 137 -175 331 280 140 0 chr17 72679391 72679498 -16825055 - MIR3 SINE MIR -80 128 7 219 321 37 25 chr17 72679868 72679949 -16824604 + L2 LINE L2 3176 3257 -56 205 269 0 45 chr17 72679987 72680054 -16824499 - MIR SINE MIR -117 145 82 2168 112 0 0 chr17 72680196 72680501 -16824052 + AluSq SINE Alu 1 305 -8 1845 117 4 4 chr17 72680957 72681231 -16823322 + AluSx SINE Alu 27 300 -12 940 189 80 9 chr17 72682665 72682877 -16821676 + MIR SINE MIR 12 238 -24 1857 101 62 4 chr17 72683022 72683298 -16821255 - AluSx SINE Alu -20 292 1 3170 169 47 0 chr17 72683714 72684272 -16820281 + L1MB7 LINE L1 5543 6126 -58 1286 144 72 13 chr17 72684998 72685029 -16819524 + L1M3 LINE L1 5444 5472 -708 186 71 0 0 chr17 72685029 72685057 -16819496 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1286 144 72 13 chr17 72685057 72685068 -16819485 + L1M3 LINE L1 5472 5481 -699 1399 164 71 0 chr17 72685068 72685336 -16819217 + AluJo SINE Alu 1 287 -25 1286 144 72 13 chr17 72685336 72685558 -16818995 + L1M3 LINE L1 5481 5711 -469 2177 113 0 0 chr17 72685561 72685862 -16818691 - AluSx SINE Alu -9 303 3 215 302 151 0 chr17 72686956 72687042 -16817511 + L2 LINE L2 3173 3271 -1 2029 120 0 27 chr17 72688410 72688710 -16815843 + AluSx SINE Alu 1 292 -20 31 44 0 0 chr17 72688877 72688922 -16815631 + AT_rich Low_complexity Low_complexity 1 45 0 1370 140 29 48 chr17 72688999 72689049 -16815504 - L1MB3 LINE L1 -2 6181 6132 1718 154 0 43 chr17 72689049 72689374 -16815179 - AluJo SINE Alu -1 311 1 1370 140 29 48 chr17 72689374 72689595 -16814958 - L1MB3 LINE L1 -51 6132 5915 390 262 121 0 chr17 72689891 72690032 -16814521 - MIR SINE MIR -46 216 59 2242 79 16 0 chr17 72690211 72690514 -16814039 - AluSg SINE Alu -2 308 1 1642 118 45 76 chr17 72690514 72690575 -16813978 - Charlie5 DNA MER1_type -45 2579 2518 1718 174 0 7 chr17 72690575 72690879 -16813674 + AluJo SINE Alu 11 312 0 1642 118 45 76 chr17 72690879 72691174 -16813379 - Charlie5 DNA MER1_type -106 2518 2234 470 271 0 0 chr17 72691179 72691297 -16813256 - Charlie5 DNA MER1_type -2494 118 1 896 167 86 6 chr17 72691354 72691528 -16813025 - MER58A DNA MER1_type -4 220 33 2136 93 3 17 chr17 72692521 72692822 -16811731 + AluSx SINE Alu 1 297 -15 256 306 59 0 chr17 72693368 72693453 -16811100 + MIR SINE MIR 50 139 -123 2111 99 7 0 chr17 72693497 72693789 -16810764 + AluSg SINE Alu 1 294 -16 1576 157 33 18 chr17 72693797 72694071 -16810482 + AluJo SINE Alu 1 278 -34 31 0 0 0 chr17 72694075 72694106 -16810447 + AT_rich Low_complexity Low_complexity 1 31 0 2200 105 0 0 chr17 72694111 72694416 -16810137 - AluSx SINE Alu -7 305 1 199 209 30 30 chr17 72694445 72694512 -16810041 + MIR SINE MIR 195 261 -1 214 290 54 21 chr17 72694815 72694908 -16809645 - MER5A DNA MER1_type -74 115 20 837 143 33 24 chr17 72695521 72695669 -16808884 - L1MB5 LINE L1 0 6174 6029 1924 151 114 46 chr17 72695669 72695738 -16808815 - MLT1C LTR MaLR 0 467 404 2097 118 0 7 chr17 72695738 72696044 -16808509 + AluSx SINE Alu 1 304 -8 1924 151 114 46 chr17 72696044 72696160 -16808393 - MLT1C LTR MaLR -63 404 297 1953 131 3 3 chr17 72696160 72696465 -16808088 - AluY SINE Alu -6 305 1 1924 151 114 46 chr17 72696465 72696715 -16807838 - MLT1C LTR MaLR -170 297 1 837 143 33 24 chr17 72696715 72696776 -16807777 - L1MB5 LINE L1 -145 6029 5786 1922 154 0 0 chr17 72697035 72697333 -16807220 + AluJb SINE Alu 1 298 -14 332 213 13 13 chr17 72698299 72698374 -16806179 - MER5B DNA MER1_type -103 75 1 806 201 0 13 chr17 72699188 72699342 -16805211 + FRAM SINE Alu 2 153 -13 570 161 11 0 chr17 72699503 72699596 -16804957 + AluJb SINE Alu 202 295 -17 2136 135 0 0 chr17 72699960 72700272 -16804281 - AluSx SINE Alu 0 312 1 1931 154 0 3 chr17 72700439 72700745 -16803808 + AluJb SINE Alu 7 311 -1 437 291 56 48 chr17 72701767 72702018 -16802535 + L1ME LINE L1 155 407 -5798 323 373 24 12 chr17 72702025 72702194 -16802359 + L1ME LINE L1 1642 1812 -4584 1655 107 169 11 chr17 72702343 72702604 -16801949 - AluSx SINE Alu 0 302 1 295 250 14 14 chr17 72702797 72702869 -16801684 + LTR67 LTR ERVL 101 172 -385 * 349 200 0 15 chr17 72702810 72702875 -16801678 + MLT1J LTR MaLR 110 173 -338 397 312 83 19 chr17 72703035 72703192 -16801361 + L1ME LINE L1 3721 3887 -2328 990 275 90 72 chr17 72703234 72703769 -16800784 + L1ME LINE L1 4136 4660 -1571 2047 120 3 0 chr17 72703769 72704069 -16800484 + AluY SINE Alu 2 302 -9 990 275 90 72 chr17 72704069 72704394 -16800159 + L1ME LINE L1 4660 4978 -1253 1786 156 0 0 chr17 72704394 72704705 -16799848 + AluJb SINE Alu 1 311 0 990 275 90 72 chr17 72704705 72705406 -16799147 + L1ME LINE L1 4978 5729 -502 2197 58 0 0 chr17 72705617 72705915 -16798638 + AluY SINE Alu 3 300 0 1916 129 0 3 chr17 72706128 72706453 -16798100 - AluSx SINE Alu 0 324 1 1057 316 94 85 chr17 72706687 72706983 -16797570 + L3 LINE CR1 466 758 -819 1832 159 7 0 chr17 72706983 72707291 -16797262 + AluSx SINE Alu 1 310 -2 1057 316 94 85 chr17 72707291 72707513 -16797040 + L3 LINE CR1 758 977 -600 258 32 0 0 chr17 72707513 72707544 -16797009 + (CA)n Simple_repeat Simple_repeat 2 32 0 1057 316 94 85 chr17 72707544 72708137 -16796416 + L3 LINE CR1 977 1566 -11 225 346 19 48 chr17 72708520 72708624 -16795929 - L2 LINE L2 -4 3268 3168 304 265 69 10 chr17 72709091 72709193 -16795360 - LTR67 LTR ERVL -2 555 448 1743 128 33 0 chr17 72709432 72709706 -16794847 - L1M4 LINE L1 -587 5591 5309 2095 102 0 0 chr17 72709919 72710202 -16794351 - AluSx SINE Alu -28 284 2 1830 150 0 0 chr17 72711082 72711369 -16793184 + AluJo SINE Alu 1 287 -25 1808 123 11 0 chr17 72711377 72711646 -16792907 + AluSx SINE Alu 29 300 -12 186 133 0 0 chr17 72711798 72711828 -16792725 + (CATATA)n Simple_repeat Simple_repeat 3 32 0 448 292 44 15 chr17 72711842 72711979 -16792574 - L2 LINE L2 -27 3286 3146 1648 108 116 7 chr17 72711980 72712257 -16792296 + AluSc SINE Alu 1 307 -2 204 40 0 0 chr17 72712334 72712359 -16792194 + (TA)n Simple_repeat Simple_repeat 2 26 0 1909 156 0 3 chr17 72713275 72713583 -16790970 + AluJo SINE Alu 1 307 -5 762 188 12 100 chr17 72713943 72714183 -16790370 - MER20 DNA MER1_type 0 219 1 712 156 9 0 chr17 72714186 72714295 -16790258 + MER81 DNA DNA 1 110 -4 2064 125 0 0 chr17 72714351 72714648 -16789905 + AluSx SINE Alu 1 297 -15 940 68 0 0 chr17 72715214 72715332 -16789221 + AluSq/x SINE Alu 1 118 -194 561 174 10 0 chr17 72715334 72715432 -16789121 + AluSc SINE Alu 196 294 -15 180 313 75 0 chr17 72716249 72716316 -16788237 + L3 LINE CR1 1262 1333 -244 2272 54 0 0 chr17 72716822 72717100 -16787453 + AluY SINE Alu 1 278 -33 221 0 35 0 chr17 72717102 72717131 -16787422 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1426 227 77 51 chr17 72717345 72717798 -16786755 - MLT1C LTR MaLR -2 465 1 663 71 9 3 chr17 72718641 72718867 -16785686 + AluSx SINE Alu 1 298 -11 2227 105 0 3 chr17 72720296 72720601 -16783952 - AluSx SINE Alu -8 304 1 271 268 0 0 chr17 72720721 72720777 -16783776 + L2 LINE L2 3258 3313 0 225 253 96 36 chr17 72721199 72721282 -16783271 + MIR SINE MIR 103 190 -72 2108 97 0 53 chr17 72721588 72721907 -16782646 + AluSx SINE Alu 1 302 -10 618 180 56 43 chr17 72722363 72722524 -16782029 + MER53 DNA DNA 2 164 -25 219 278 14 28 chr17 72722980 72723052 -16781501 - L2 LINE L2 -204 3068 2998 1355 214 92 15 chr17 72723084 72723421 -16781132 - MLT1A2 LTR MaLR -11 363 1 1904 138 40 0 chr17 72725648 72725946 -16778607 + AluSx SINE Alu 1 310 -2 610 225 49 0 chr17 72726091 72726233 -16778320 + MER103 DNA DNA 16 164 -2 2136 119 0 0 chr17 72727217 72727512 -16777041 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr17 72727797 72727820 -16776733 + AT_rich Low_complexity Low_complexity 1 23 0 842 126 0 0 chr17 72727820 72727939 -16776614 - FLAM_C SINE Alu -24 119 1 323 113 0 81 chr17 72729863 72729925 -16774628 - MLT2C2 LTR ERVL 0 464 408 595 137 7 53 chr17 72729926 72730230 -16774323 + (TAGA)n Simple_repeat Simple_repeat 1 289 0 2064 226 27 21 chr17 72730230 72730704 -16773849 - MLT2B2 LTR ERVL -38 477 1 233 245 112 10 chr17 72732108 72732206 -16772347 - L1MC/D LINE L1 -2037 5771 5664 2124 108 0 0 chr17 72732246 72732542 -16772011 - AluSx SINE Alu -6 306 11 623 300 95 5 chr17 72732902 72733102 -16771451 + MIR SINE MIR 8 225 -37 2244 85 3 0 chr17 72733252 72733547 -16771006 + AluY SINE Alu 1 296 -15 3223 155 31 69 chr17 72733564 72733741 -16770812 + L1MB8 LINE L1 5496 5678 -500 2157 117 3 0 chr17 72733741 72734048 -16770505 + AluSg SINE Alu 1 308 -2 3223 155 31 69 chr17 72734048 72734553 -16770000 + L1MB8 LINE L1 5678 6152 -26 845 137 0 27 chr17 72734560 72734706 -16769847 - FRAM SINE Alu -1 175 34 221 265 44 0 chr17 72734774 72734842 -16769711 + MER5A DNA MER1_type 87 157 -32 573 314 67 9 chr17 72736610 72736833 -16767720 - MIR SINE MIR -7 255 20 1294 227 93 116 chr17 72737130 72737196 -16767357 - MLT1E3 LTR MaLR 0 624 558 1686 181 13 3 chr17 72737196 72737505 -16767048 + AluJo SINE Alu 1 312 0 1294 227 93 116 chr17 72737505 72738042 -16766511 - MLT1E3 LTR MaLR -66 558 4 1087 233 112 10 chr17 72738863 72739168 -16765385 + MLT1C LTR MaLR 132 467 0 275 297 100 41 chr17 72739171 72739440 -16765113 - L2 LINE L2 -940 2374 2090 2104 102 10 3 chr17 72739601 72739904 -16764649 - AluSx SINE Alu -7 305 1 250 315 5 85 chr17 72739907 72740107 -16764446 - L2 LINE L2 -1521 1793 1610 570 294 108 13 chr17 72740110 72740341 -16764212 - MIR SINE MIR -4 258 6 569 164 103 9 chr17 72741697 72741813 -16762740 - MER5A DNA MER1_type -2 187 61 2234 119 0 0 chr17 72741813 72742218 -16762335 - AluSx SINE Alu 0 405 1 297 179 104 0 chr17 72742219 72742286 -16762267 - MER5A DNA MER1_type -114 75 2 628 244 24 37 chr17 72742319 72742483 -16762070 + MIR SINE MIR 69 230 -32 182 275 25 0 chr17 72742985 72743025 -16761528 - MIR SINE MIR -85 123 83 1621 162 3 32 chr17 72743043 72743352 -16761201 + AluJo SINE Alu 3 302 -10 1639 106 106 0 chr17 72743369 72743624 -16760929 + AluSx SINE Alu 23 304 -8 105 24 0 0 chr17 72743624 72743750 -16760803 + AT_rich Low_complexity Low_complexity 1 126 0 2170 120 0 0 chr17 72744741 72745050 -16759503 + AluSx SINE Alu 1 309 -3 180 0 0 0 chr17 72745656 72745676 -16758877 + (T)n Simple_repeat Simple_repeat 1 20 0 380 196 51 80 chr17 72745676 72745700 -16758853 - L1ME4a LINE L1 0 6121 6098 2090 105 3 3 chr17 72745700 72745994 -16758559 + AluSx SINE Alu 3 296 -16 380 196 51 80 chr17 72745994 72746107 -16758446 - L1ME4a LINE L1 -23 6098 5988 1830 143 17 0 chr17 72746390 72746683 -16757870 - AluJb SINE Alu -14 298 1 1421 198 28 7 chr17 72746809 72747097 -16757456 + AluJb SINE Alu 1 294 -18 2127 78 3 3 chr17 72747793 72748100 -16756453 + AluSq SINE Alu 2 308 0 592 171 36 0 chr17 72749032 72749143 -16755410 - MER5B DNA MER1_type 0 178 64 622 202 16 109 chr17 72749307 72749346 -16755207 - MER5B DNA MER1_type 0 178 137 2212 94 0 0 chr17 72749346 72749644 -16754909 + AluSx SINE Alu 1 298 -14 622 202 16 109 chr17 72749644 72749736 -16754817 - MER5B DNA MER1_type -41 137 68 2164 80 28 0 chr17 72749736 72749904 -16754649 - AluY SINE Alu -14 297 116 462 18 0 0 chr17 72749904 72749959 -16754594 + (TG)n Simple_repeat Simple_repeat 2 56 0 2164 80 28 0 chr17 72749959 72750079 -16754474 - AluY SINE Alu -195 116 1 622 202 16 109 chr17 72750079 72750139 -16754414 - MER5B DNA MER1_type -110 68 4 400 240 169 71 chr17 72750790 72750873 -16753680 - L2 LINE L2 -9 3304 3231 2156 109 0 3 chr17 72750873 72751176 -16753377 + AluSp SINE Alu 1 302 -11 400 240 169 71 chr17 72751176 72751388 -16753165 - L2 LINE L2 -82 3231 2980 1721 182 42 55 chr17 72751388 72751560 -16752993 + MLT1B LTR MaLR 16 189 -201 1732 166 0 7 chr17 72751560 72751856 -16752697 + AluSx SINE Alu 1 294 -18 1721 182 42 55 chr17 72751856 72752063 -16752490 + MLT1B LTR MaLR 189 390 0 452 330 64 28 chr17 72752067 72752285 -16752268 - L2 LINE L2 -373 2941 2716 663 173 222 82 chr17 72752299 72752347 -16752206 - L1MD3 LINE L1 0 7995 7955 1779 132 23 46 chr17 72752347 72752651 -16751902 + AluSq SINE Alu 1 297 -16 663 173 222 82 chr17 72752651 72752845 -16751708 - L1MD3 LINE L1 -40 7955 7719 965 285 63 49 chr17 72752845 72753246 -16751307 - L2 LINE L2 -612 2702 2293 1702 172 0 23 chr17 72753246 72753554 -16750999 + AluJb SINE Alu 1 301 -11 965 285 63 49 chr17 72753554 72753597 -16750956 - L2 LINE L2 -1021 2293 2252 2214 117 0 0 chr17 72754037 72754345 -16750208 - AluSx SINE Alu -4 308 1 1526 199 0 4 chr17 72754369 72754636 -16749917 + Tigger7 DNA MER2_type 1 266 -284 489 220 0 20 chr17 72754641 72754741 -16749812 + Tigger7 DNA MER2_type 2490 2587 0 270 235 0 86 chr17 72755613 72755694 -16748859 + L1MC4 LINE L1 7169 7242 -800 2027 153 0 0 chr17 72755727 72756034 -16748519 + AluSx SINE Alu 2 308 -4 1445 208 73 61 chr17 72756041 72756517 -16748036 + L1MC4a LINE L1 5974 6455 -1353 3043 204 75 56 chr17 72756538 72756721 -16747832 + L1MC4 LINE L1 7158 7336 -706 2090 96 40 7 chr17 72756721 72757023 -16747530 + AluSq SINE Alu 1 312 -1 3043 204 75 56 chr17 72757023 72757160 -16747393 + L1MC4 LINE L1 7336 7469 -573 243 0 0 0 chr17 72757160 72757187 -16747366 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3043 204 75 56 chr17 72757187 72757728 -16746825 + L1MC4 LINE L1 7469 8037 -5 1708 160 0 10 chr17 72757759 72758052 -16746501 - AluJb SINE Alu -21 291 2 1008 296 148 44 chr17 72758079 72758795 -16745758 + L1M4 LINE L1 4151 4960 -1186 1818 174 0 3 chr17 72758795 72759100 -16745453 + AluJb SINE Alu 1 304 -8 1008 296 148 44 chr17 72759100 72759180 -16745373 + L1M4 LINE L1 4960 5030 -1116 1896 144 3 0 chr17 72759429 72759727 -16744826 - AluSx SINE Alu -1 311 13 280 297 50 0 chr17 72760221 72760322 -16744231 + MIR SINE MIR 107 212 -50 552 308 96 0 chr17 72760768 72760966 -16743587 + MIR SINE MIR 16 232 -30 461 230 43 29 chr17 72760984 72761123 -16743430 + MER104 DNA Tc2 15 155 -25 1179 111 0 0 chr17 72762544 72762716 -16741837 - AluSg/x SINE Alu -5 307 136 1678 182 7 0 chr17 72762935 72763232 -16741321 - AluJo SINE Alu -13 299 1 1955 149 0 13 chr17 72763311 72763620 -16740933 + AluSx SINE Alu 1 305 -7 190 298 53 0 chr17 72763720 72763777 -16740776 - L2 LINE L2 0 3313 3254 2043 75 0 51 chr17 72763982 72764301 -16740252 + AluSc SINE Alu 2 305 0 696 169 90 34 chr17 72764469 72764647 -16739906 + MLT1A1 LTR MaLR 23 210 -155 301 152 0 22 chr17 72764649 72764695 -16739858 + Alu SINE Alu 3 47 -256 1725 124 49 4 chr17 72764695 72764985 -16739568 + AluSx SINE Alu 3 304 0 1472 99 0 5 chr17 72765200 72765401 -16739152 + AluSq SINE Alu 100 299 -14 502 185 40 39 chr17 72765401 72765489 -16739064 + MLT1A1 LTR MaLR 201 361 -67 213 39 0 0 chr17 72765489 72765515 -16739038 + (TA)n Simple_repeat Simple_repeat 2 27 0 502 185 40 39 chr17 72765515 72765528 -16739025 + MLT1A1 LTR MaLR 361 372 -56 790 122 0 0 chr17 72765532 72765639 -16738914 - AluSq/x SINE Alu -206 107 1 473 147 0 0 chr17 72765640 72765715 -16738838 + MLT1A1 LTR MaLR 291 365 0 483 337 96 35 chr17 72765727 72766249 -16738304 - L2 LINE L2 -954 2360 1807 529 298 102 39 chr17 72766891 72767223 -16737330 + L1MEd LINE L1 791 1143 -4976 510 29 143 0 chr17 72767225 72767295 -16737258 + MADE1 DNA Mariner 1 80 0 2221 50 43 0 chr17 72767542 72767824 -16736729 - AluY SINE Alu -4 307 14 240 118 0 0 chr17 72767836 72767870 -16736683 + HSMAR1 DNA Mariner 1 34 -1253 712 174 0 25 chr17 72767872 72767993 -16736560 - FLAM_C SINE Alu -15 118 1 228 297 115 55 chr17 72768127 72768309 -16736244 - L2 LINE L2 0 3313 3121 1972 128 0 0 chr17 72768318 72768630 -16735923 + AluSx SINE Alu 1 312 0 1782 176 0 0 chr17 72769457 72769769 -16734784 + AluJb SINE Alu 1 312 0 2402 71 0 3 chr17 72770725 72771034 -16733519 - AluY SINE Alu -3 308 1 2058 118 3 7 chr17 72771038 72771342 -16733211 - AluSx SINE Alu -9 303 1 2189 100 0 13 chr17 72771424 72771733 -16732820 - AluSx SINE Alu -7 305 1 258 200 0 62 chr17 72771733 72771790 -16732763 - L1ME LINE L1 -503 5663 5609 1577 172 125 77 chr17 72771835 72772276 -16732277 + MLT1C LTR MaLR 6 467 0 1933 141 7 0 chr17 72772291 72772588 -16731965 - AluSx SINE Alu -13 299 1 1986 130 0 0 chr17 72773371 72773691 -16730862 + AluSq SINE Alu 1 299 -14 818 153 0 8 chr17 72774949 72775080 -16729473 - FLAM_C SINE Alu -1 132 3 35 0 0 22 chr17 72775091 72775122 -16729431 + AT_rich Low_complexity Low_complexity 1 32 -13 1984 120 7 10 chr17 72775122 72775423 -16729130 - AluSx SINE Alu -12 300 1 35 0 0 22 chr17 72775423 72775437 -16729116 + AT_rich Low_complexity Low_complexity 32 45 0 1325 182 26 4 chr17 72775695 72775964 -16728589 - AluJb SINE Alu 0 312 38 1773 129 4 15 chr17 72775974 72776238 -16728315 - AluSx SINE Alu -15 297 37 308 275 29 87 chr17 72776245 72776383 -16728170 - L1ME LINE L1 -299 5822 5693 231 216 68 80 chr17 72776407 72776495 -16728058 + L2 LINE L2 2223 2309 -1005 2011 106 31 3 chr17 72776606 72776898 -16727655 - AluSp SINE Alu -13 300 1 531 90 0 0 chr17 72777070 72777148 -16727405 + (TCCA)n Simple_repeat Simple_repeat 1 78 0 334 310 113 7 chr17 72777219 72777361 -16727192 + MIR SINE MIR 11 167 -95 2064 91 3 39 chr17 72778034 72778343 -16726210 + AluSp SINE Alu 11 308 -5 2366 84 0 0 chr17 72778849 72779158 -16725395 - AluSc SINE Alu 0 309 1 712 147 54 16 chr17 72779158 72779287 -16725266 - AluSq/x SINE Alu -178 135 2 377 162 118 0 chr17 72779580 72779648 -16724905 - MER5A DNA MER1_type -80 109 34 2229 107 3 0 chr17 72780209 72780519 -16724034 + AluSq SINE Alu 1 311 -2 878 126 0 0 chr17 72780636 72780763 -16723790 + FLAM_C SINE Alu 1 127 -16 207 0 0 0 chr17 72780764 72780787 -16723766 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 773 214 30 68 chr17 72780836 72780999 -16723554 + L1MC4 LINE L1 7436 7587 -455 1591 163 16 46 chr17 72780999 72781306 -16723247 + AluJo SINE Alu 1 298 -14 773 214 30 68 chr17 72781306 72781408 -16723145 + L1MC4 LINE L1 7587 7691 -351 560 194 0 0 chr17 72781420 72781513 -16723040 - FLAM_A SINE Alu -21 121 29 267 54 0 0 chr17 72781528 72781565 -16722988 + (T)n Simple_repeat Simple_repeat 1 37 0 977 220 67 75 chr17 72781585 72781770 -16722783 + L1MC4 LINE L1 7674 7856 -186 2276 93 0 3 chr17 72781770 72782081 -16722472 + AluSq SINE Alu 1 310 -3 977 220 67 75 chr17 72782081 72782267 -16722286 + L1MC4 LINE L1 7856 8042 0 26 0 0 0 chr17 72782994 72783020 -16721533 + AT_rich Low_complexity Low_complexity 1 26 0 372 303 102 20 chr17 72783759 72783935 -16720618 + MIR SINE MIR 3 199 -52 1894 119 4 0 chr17 72784676 72784990 -16719563 - AluSx SINE Alu 0 327 13 1942 138 0 0 chr17 72785008 72785299 -16719254 - AluSx SINE Alu -21 291 1 2088 100 6 32 chr17 72785841 72786152 -16718401 - AluSx SINE Alu -9 303 1 473 282 34 34 chr17 72786187 72786336 -16718217 + MIR SINE MIR 6 154 -108 1704 160 0 18 chr17 72786760 72787041 -16717512 + AluJb SINE Alu 1 276 -36 1800 153 3 17 chr17 72788022 72788322 -16716231 - AluJb SINE Alu -5 307 12 347 331 43 6 chr17 72788485 72788648 -16715905 - HAL1 LINE L1 -966 1541 1373 639 231 149 0 chr17 72788684 72788879 -16715674 + MIR SINE MIR 39 262 0 314 219 0 16 chr17 72788901 72788983 -16715570 - L1MEc LINE L1 -4893 1261 1158 462 139 0 0 chr17 72788997 72789083 -16715470 + (C)n Simple_repeat Simple_repeat 1 86 0 191 200 0 59 chr17 72789150 72789235 -16715318 + C-rich Low_complexity Low_complexity 1 80 0 29 28 0 0 chr17 72789297 72789333 -16715220 + GC_rich Low_complexity Low_complexity 1 36 0 249 351 0 0 chr17 72789353 72789484 -16715069 + C-rich Low_complexity Low_complexity 1 131 0 1489 99 0 5 chr17 72789693 72789894 -16714659 - AluSg/x SINE Alu -21 291 92 1425 121 81 0 chr17 72791087 72791310 -16713243 + AluSq SINE Alu 1 241 -72 1958 102 42 3 chr17 72791549 72791832 -16712721 - AluSq SINE Alu -19 294 1 1598 120 62 74 chr17 72792591 72792900 -16711653 + AluSx SINE Alu 1 305 -7 360 0 0 0 chr17 72792901 72792941 -16711612 + (CA)n Simple_repeat Simple_repeat 1 40 0 569 244 196 71 chr17 72793136 72793813 -16710740 + LTR41 LTR ERVL 6 767 -6 1774 128 83 0 chr17 72793977 72794265 -16710288 + AluSx SINE Alu 1 312 0 402 290 32 32 chr17 72794336 72794460 -16710093 - MIR SINE MIR -105 157 34 1856 106 29 11 chr17 72794912 72795185 -16709368 - AluSq SINE Alu -16 297 20 282 256 8 104 chr17 72795471 72795510 -16709043 + MIR SINE MIR 32 73 -135 2078 108 7 0 chr17 72795510 72795797 -16708756 + AluSx SINE Alu 1 289 -23 282 256 8 104 chr17 72795797 72795882 -16708671 + MIR SINE MIR 73 144 -64 1851 159 3 0 chr17 72795895 72796203 -16708350 + AluJo SINE Alu 3 311 -1 284 274 0 12 chr17 72797265 72797349 -16707204 + L1ME LINE L1 5582 5664 -457 1466 155 76 7 chr17 72797354 72797644 -16706909 + AluSx SINE Alu 1 310 -2 1750 186 0 0 chr17 72797679 72797991 -16706562 + AluJb SINE Alu 1 312 0 251 255 13 111 chr17 72798011 72798164 -16706389 + L1ME LINE L1 5674 5806 -315 429 113 14 0 chr17 72798435 72798506 -16706047 + L1MC2 LINE L1 6258 6329 -15 2038 115 3 16 chr17 72798510 72798822 -16705731 + AluSx SINE Alu 5 312 0 1693 119 55 0 chr17 72799309 72799562 -16704991 - AluSx SINE Alu -20 292 26 1976 110 13 7 chr17 72799859 72800168 -16704385 + AluSx SINE Alu 1 311 -1 407 228 0 22 chr17 72800847 72800939 -16703614 - L1MC4 LINE L1 -1339 6703 6614 359 280 0 11 chr17 72800921 72801000 -16703553 + L1MC4 LINE L1 6614 6693 -1349 * 1752 134 22 0 chr17 72801000 72801276 -16703277 - AluSx SINE Alu -30 282 1 359 280 0 11 chr17 72801276 72801289 -16703264 + L1MC4 LINE L1 6693 6705 -1337 180 241 19 19 chr17 72801340 72801394 -16703159 + L2 LINE L2 3165 3218 -95 202 445 59 0 chr17 72801643 72801744 -16702809 - L2 LINE L2 -50 3222 3116 2274 87 0 7 chr17 72801836 72802145 -16702408 - AluSx SINE Alu -5 307 1 252 255 191 11 chr17 72802156 72802250 -16702303 - MIR SINE MIR -68 140 30 1138 259 40 86 chr17 72802326 72802553 -16702000 + L1MC4a LINE L1 5292 5528 -593 2267 101 0 0 chr17 72802553 72802849 -16701704 + AluSx SINE Alu 1 296 -16 1138 259 40 86 chr17 72802849 72803366 -16701187 + L1MC4a LINE L1 5528 6012 -109 1375 98 0 0 chr17 72803576 72803759 -16700794 + AluSg/x SINE Alu 112 294 -16 452 19 0 0 chr17 72803761 72803815 -16700738 + AluY SINE Alu 2 55 -258 387 0 0 0 chr17 72804759 72804802 -16699751 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 195 42 0 0 chr17 72804801 72804825 -16699728 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 * 1942 100 18 18 chr17 72804825 72805105 -16699448 - AluSg SINE Alu -30 280 1 2293 89 0 0 chr17 72805107 72805410 -16699143 - AluSx SINE Alu -9 303 1 1291 161 65 0 chr17 72805418 72805666 -16698887 - L1MB3 LINE L1 -1 6182 5919 3932 91 35 2 chr17 72805677 72806213 -16698340 + MER41A LTR ERV1 1 554 0 200 286 229 46 chr17 72806242 72806592 -16697961 - L2 LINE L2 -865 2449 2036 2062 134 3 0 chr17 72806653 72806959 -16697594 - AluSx SINE Alu -5 307 1 386 233 154 25 chr17 72807426 72807666 -16696887 - L1ME4a LINE L1 -103 6018 5748 23 33 0 0 chr17 72807743 72807773 -16696780 + AT_rich Low_complexity Low_complexity 1 30 0 995 65 0 0 chr17 72808587 72808710 -16695843 + AluYb8 SINE Alu 1 123 -195 3882 209 54 20 chr17 72808711 72809735 -16694818 + L1M4 LINE L1 2210 3267 -2879 1423 169 124 152 chr17 72810180 72810843 -16693710 + LTR48B LTR ERV1 1 644 0 292 331 173 0 chr17 72810931 72811058 -16693495 + MIR3 SINE MIR 36 184 -24 2084 74 3 14 chr17 72811267 72811550 -16693003 + AluSx SINE Alu 3 282 -30 693 36 0 0 chr17 72811553 72811637 -16692916 + (CAATA)n Simple_repeat Simple_repeat 2 85 0 395 269 8 75 chr17 72812315 72812449 -16692104 - MIR SINE MIR -26 236 112 2194 101 0 3 chr17 72812518 72812816 -16691737 - AluSq SINE Alu -16 297 1 1717 117 0 91 chr17 72813376 72813717 -16690836 + AluJo SINE Alu 1 310 -2 2009 158 63 5 chr17 72813717 72814096 -16690457 - L1MB7 LINE L1 -20 6164 5764 318 235 54 103 chr17 72814280 72814444 -16690109 + HAL1 LINE L1 2222 2376 -131 1795 159 105 0 chr17 72814444 72814759 -16689794 - MER7A DNA MER2_type 0 346 1 318 235 54 103 chr17 72814759 72814798 -16689755 + HAL1 LINE L1 2376 2415 -92 1848 133 0 13 chr17 72814849 72815149 -16689404 + AluJb SINE Alu 1 296 -16 2687 158 0 51 chr17 72815149 72815193 -16689360 + L1M3 LINE L1 5323 5368 -966 2077 125 3 6 chr17 72815193 72815506 -16689047 + AluSx SINE Alu 1 312 0 2687 158 0 51 chr17 72815506 72815968 -16688585 + L1M3 LINE L1 5368 5803 -531 611 108 0 0 chr17 72815969 72816052 -16688501 - AluS SINE Alu -228 84 2 387 262 71 24 chr17 72816065 72816191 -16688362 + L1ME3A LINE L1 5255 5386 -856 1934 142 0 29 chr17 72816195 72816511 -16688042 + AluSx SINE Alu 1 307 -5 1878 148 13 0 chr17 72816537 72816835 -16687718 + AluJo SINE Alu 1 302 -10 810 90 139 0 chr17 72817020 72817142 -16687411 + AluSg/x SINE Alu 158 296 -16 1001 161 6 0 chr17 72817223 72817385 -16687168 - FAM SINE Alu -11 164 2 229 236 18 0 chr17 72818556 72818611 -16685942 - MLT1I LTR MaLR 0 409 354 2546 101 0 19 chr17 72818618 72818993 -16685560 + L1PA13 LINE L1 5793 6160 -3 2500 45 0 6 chr17 72819008 72819321 -16685232 + AluY SINE Alu 1 311 0 1757 147 7 23 chr17 72819373 72819673 -16684880 - AluJb SINE Alu -17 295 1 1993 114 0 0 chr17 72819864 72820222 -16684331 + AluSg1 SINE Alu 1 358 0 447 219 109 25 chr17 72820312 72820431 -16684122 + L2 LINE L2 3185 3313 0 1420 249 105 35 chr17 72821308 72821786 -16682767 + L1ME3A LINE L1 5570 6094 -76 1068 218 208 30 chr17 72821786 72822213 -16682340 - MLT1D LTR MaLR -2 503 1 1420 249 105 35 chr17 72822213 72822285 -16682268 + L1ME3A LINE L1 6094 6159 -11 24 32 0 0 chr17 72822360 72822391 -16682162 + AT_rich Low_complexity Low_complexity 1 31 0 1284 186 35 4 chr17 72822524 72822782 -16681771 - AluJo SINE Alu -1 311 46 180 0 0 0 chr17 72823410 72823430 -16681123 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 200 260 14 96 chr17 72823900 72823973 -16680580 - MIR3 SINE MIR -3 205 139 351 0 0 0 chr17 72824222 72824261 -16680292 + (CA)n Simple_repeat Simple_repeat 2 40 0 1979 123 30 0 chr17 72824337 72824638 -16679915 + AluSx SINE Alu 1 310 -2 574 219 59 71 chr17 72824714 72824883 -16679670 + MER5B DNA MER1_type 12 178 0 2714 167 34 46 chr17 72825213 72825805 -16678748 + L1MB3 LINE L1 5599 6183 0 1941 123 31 0 chr17 72826895 72827187 -16677366 + AluSx SINE Alu 1 301 -11 625 304 34 25 chr17 72827392 72827596 -16676957 + MIR SINE MIR 1 206 -56 2173 106 0 0 chr17 72827610 72827902 -16676651 - AluSx SINE Alu -20 292 1 2180 110 3 0 chr17 72828340 72828649 -16675904 + AluSp SINE Alu 1 310 -3 282 146 21 0 chr17 72828650 72828698 -16675855 - MLT1L LTR MaLR -557 58 10 395 313 119 6 chr17 72829585 72829761 -16674792 + MIR3 SINE MIR 5 200 -8 28 29 0 0 chr17 72830287 72830322 -16674231 + AT_rich Low_complexity Low_complexity 1 35 0 186 71 0 0 chr17 72830874 72830902 -16673651 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 812 141 25 0 chr17 72830924 72831045 -16673508 + FLAM_C SINE Alu 2 125 -8 441 314 58 37 chr17 72831067 72831309 -16673244 + MLT1J LTR MaLR 3 249 -262 1926 109 0 4 chr17 72831359 72831634 -16672919 - AluSx SINE Alu -38 274 1 728 289 57 33 chr17 72831815 72832213 -16672340 - L1ME4a LINE L1 -76 6045 5640 25 0 0 0 chr17 72833642 72833667 -16670886 + AT_rich Low_complexity Low_complexity 1 25 0 1398 145 19 91 chr17 72834851 72835012 -16669541 + AluJo SINE Alu 1 129 -183 2121 120 7 0 chr17 72835012 72835313 -16669240 + AluSq SINE Alu 1 303 -10 1398 145 19 91 chr17 72835313 72835469 -16669084 + AluJo SINE Alu 129 295 -17 731 213 148 0 chr17 72835534 72835689 -16668864 - MER5A DNA MER1_type -5 184 7 904 115 0 22 chr17 72835770 72835909 -16668644 + AluJo SINE Alu 1 136 -176 345 271 10 10 chr17 72835911 72836007 -16668546 + MER5B DNA MER1_type 83 178 0 198 254 22 116 chr17 72836007 72836069 -16668484 + MIR3 SINE MIR 54 99 -109 2147 110 3 3 chr17 72836069 72836379 -16668174 + AluSx SINE Alu 1 310 -2 198 254 22 116 chr17 72836379 72836437 -16668116 + MIR3 SINE MIR 99 161 -47 1649 172 30 3 chr17 72837601 72837903 -16666650 + AluJo SINE Alu 1 310 -2 1085 164 19 23 chr17 72837944 72838158 -16666395 + MER20 DNA MER1_type 3 215 -4 1219 210 18 18 chr17 72838535 72838811 -16665742 + L1MD3 LINE L1 6997 7272 -723 821 201 18 57 chr17 72838811 72838952 -16665601 + AluJo SINE Alu 1 131 -181 1898 56 105 11 chr17 72838952 72839218 -16665335 + AluY SINE Alu 1 291 -20 821 201 18 57 chr17 72839218 72839305 -16665248 + AluJo SINE Alu 131 220 -92 263 174 0 0 chr17 72839305 72839351 -16665202 + FLAM SINE Alu 86 131 -2 2200 78 7 3 chr17 72839379 72839672 -16664881 + AluY SINE Alu 1 294 -17 538 158 168 0 chr17 72839688 72839789 -16664764 + MLT1F1 LTR MaLR 2 119 -448 606 86 155 78 chr17 72839793 72839888 -16664665 - MER30 DNA MER1_type -1 229 122 2292 89 0 0 chr17 72839888 72840190 -16664363 - AluY SINE Alu -9 302 1 606 86 155 78 chr17 72840190 72840210 -16664343 - MER30 DNA MER1_type -108 122 105 5688 27 0 8 chr17 72840232 72840896 -16663657 - SVA Other Other 0 1386 728 1251 192 27 72 chr17 72840896 72841230 -16663323 + L1ME1 LINE L1 5841 6159 -7 2024 141 0 0 chr17 72841231 72841522 -16663031 + AluSx SINE Alu 1 291 -21 215 125 25 0 chr17 72841523 72841563 -16662990 + (TA)n Simple_repeat Simple_repeat 2 42 0 184 280 144 56 chr17 72841648 72841773 -16662780 + L2 LINE L2 2038 2173 -1141 389 223 207 0 chr17 72841981 72842102 -16662451 - MER5A DNA MER1_type -35 154 9 1681 87 0 0 chr17 72842425 72842644 -16661909 + AluSq SINE Alu 1 219 -94 837 67 0 0 chr17 72842644 72842749 -16661804 + AluSg/x SINE Alu 186 290 -20 2344 77 0 6 chr17 72842751 72843062 -16661491 + AluY SINE Alu 1 309 -2 215 284 92 64 chr17 72843393 72843502 -16661051 + L2 LINE L2 3121 3232 -40 1958 97 47 27 chr17 72844100 72844399 -16660154 + AluSx SINE Alu 1 305 -7 409 239 130 36 chr17 72844984 72845122 -16659431 + LTR16A1 LTR ERVL 65 215 -242 1408 162 0 86 chr17 72845133 72845464 -16659089 + AluJo SINE Alu 7 311 0 2041 122 3 0 chr17 72846415 72846709 -16657844 + AluSx SINE Alu 1 295 -17 2128 111 3 0 chr17 72847244 72847542 -16657011 - AluSx SINE Alu -13 299 1 1497 174 44 24 chr17 72847543 72847836 -16656717 - AluJb SINE Alu -13 299 1 2304 80 3 0 chr17 72848449 72848750 -16655803 + AluSp SINE Alu 2 303 -10 2165 126 0 0 chr17 72848917 72849226 -16655327 + AluSx SINE Alu 1 309 -3 197 86 57 0 chr17 72849232 72849267 -16655286 + A-rich Low_complexity Low_complexity 4 40 0 385 325 66 13 chr17 72849454 72849605 -16654948 + MIR3 SINE MIR 16 174 -34 772 141 11 126 chr17 72849616 72849807 -16654746 - FRAM SINE Alu -7 169 1 404 250 100 0 chr17 72850280 72850400 -16654153 - LTR16B LTR ERVL -91 373 242 2195 97 13 7 chr17 72850410 72850720 -16653833 + AluSx SINE Alu 1 312 0 2148 92 31 0 chr17 72850734 72851027 -16653526 + AluSx SINE Alu 1 302 -10 295 202 21 85 chr17 72851782 72851876 -16652677 + L1MEd LINE L1 413 500 -6030 1098 278 103 77 chr17 72851881 72852031 -16652522 + L1MEd LINE L1 567 712 -5818 2306 80 3 3 chr17 72852031 72852344 -16652209 + AluSq SINE Alu 1 313 0 1098 278 103 77 chr17 72852344 72853163 -16651390 + L1MEd LINE L1 712 1561 -4969 1370 259 134 2 chr17 72853171 72853580 -16650973 - LTR16B LTR ERVL -1 463 1 275 294 72 6 chr17 72853581 72853761 -16650792 + L1MEd LINE L1 1568 1668 -4862 2194 81 0 10 chr17 72853767 72854075 -16650478 + AluY SINE Alu 7 311 0 1500 181 108 0 chr17 72854158 72854445 -16650108 + 7SLRNA srpRNA srpRNA 1 318 -2 203 184 11 81 chr17 72854727 72854814 -16649739 + A-rich Low_complexity Low_complexity 5 85 0 394 277 54 42 chr17 72854933 72855099 -16649454 + L1MEd LINE L1 2447 2614 -3926 354 284 0 47 chr17 72855112 72855260 -16649293 + L1MEd LINE L1 2607 2747 -3793 369 223 31 20 chr17 72855290 72855390 -16649163 + MIR SINE MIR 52 159 -49 313 243 52 59 chr17 72855434 72855570 -16648983 + L1ME4a LINE L1 5982 6116 -5 997 274 81 40 chr17 72855646 72855707 -16648846 + L1ME4a LINE L1 5555 5612 -509 1780 105 42 70 chr17 72855707 72856020 -16648533 + AluSx SINE Alu 1 304 -8 997 274 81 40 chr17 72856020 72856328 -16648225 + L1ME4a LINE L1 5612 5955 -166 1959 144 0 3 chr17 72856328 72856640 -16647913 + AluJo SINE Alu 1 311 -1 997 274 81 40 chr17 72856640 72856813 -16647740 + L1ME4a LINE L1 5955 6120 -1 606 154 100 0 chr17 72856867 72856977 -16647576 + MER58D DNA MER1_type 4 124 -262 698 254 36 12 chr17 72857008 72857173 -16647380 - MIR SINE MIR -74 188 20 2180 86 0 7 chr17 72857178 72857480 -16647073 - AluSx SINE Alu -12 300 1 1311 188 45 4 chr17 72857633 72857899 -16646654 + MER58D DNA MER1_type 110 386 0 2710 205 24 51 chr17 72858449 72858662 -16645891 + L1ME1 LINE L1 5412 5629 -537 1933 74 93 0 chr17 72858662 72858931 -16645622 + AluSc SINE Alu 1 294 -15 2710 205 24 51 chr17 72858931 72859137 -16645416 + L1ME1 LINE L1 5629 5839 -327 1752 135 26 23 chr17 72859137 72859441 -16645112 + AluJo SINE Alu 1 305 -7 2710 205 24 51 chr17 72859441 72859512 -16645041 + L1ME1 LINE L1 5839 5910 -256 2293 75 7 0 chr17 72859512 72859818 -16644735 + AluY SINE Alu 1 308 -3 2710 205 24 51 chr17 72859818 72860036 -16644517 + L1ME1 LINE L1 5910 6103 -63 2136 117 0 0 chr17 72860116 72860416 -16644137 + AluSq SINE Alu 1 300 -13 1757 152 31 31 chr17 72860418 72860725 -16643828 + L1MB4 LINE L1 5824 6133 -47 1727 151 17 7 chr17 72860725 72861017 -16643536 + AluJb SINE Alu 1 295 -17 1757 152 31 31 chr17 72861017 72861058 -16643495 + L1MB4 LINE L1 6132 6172 -8 819 133 0 8 chr17 72861463 72861583 -16642970 + FLAM_C SINE Alu 6 124 -19 1760 127 48 0 chr17 72862381 72862672 -16641881 + AluSx SINE Alu 1 304 0 2101 101 0 3 chr17 72863201 72863498 -16641055 + AluSx SINE Alu 1 296 -16 286 174 0 43 chr17 72863511 72863603 -16640950 + GA-rich Low_complexity Low_complexity 1 88 0 314 239 0 14 chr17 72863711 72863782 -16640771 - LTR32 LTR ERVL 0 471 402 995 125 12 12 chr17 72863785 72863953 -16640600 + AluJb SINE Alu 5 172 -140 2033 170 49 26 chr17 72864002 72864328 -16640225 - LTR32 LTR ERVL -60 411 73 2343 96 0 0 chr17 72864328 72864640 -16639913 - AluSx SINE Alu 0 312 1 2033 170 49 26 chr17 72864640 72864701 -16639852 - LTR32 LTR ERVL -398 73 15 2351 84 0 3 chr17 72865203 72865512 -16639041 + AluSc SINE Alu 1 308 -1 2086 206 89 44 chr17 72866015 72866539 -16638014 + LTR48B LTR ERV1 1 559 -85 2309 78 0 0 chr17 72866539 72866833 -16637720 - AluSx SINE Alu -18 294 1 2086 206 89 44 chr17 72866833 72866924 -16637629 + LTR48B LTR ERV1 559 644 0 411 221 74 42 chr17 72867236 72867426 -16637127 + L1MC5 LINE L1 7730 7925 -36 2232 86 3 3 chr17 72867513 72867814 -16636739 + AluSq SINE Alu 1 301 -12 629 167 33 67 chr17 72868475 72868576 -16635977 + MER96B DNA MER1_type? 1 95 -322 1798 142 3 42 chr17 72868576 72868887 -16635666 - AluSx SINE Alu -13 299 1 629 167 33 67 chr17 72868887 72868965 -16635588 + MER96B DNA MER1_type? 95 174 -243 306 0 0 0 chr17 72869199 72869233 -16635320 + (TA)n Simple_repeat Simple_repeat 2 35 0 354 291 75 65 chr17 72870508 72870596 -16633957 - MIR SINE MIR -14 248 162 1493 167 0 55 chr17 72870596 72870936 -16633617 + AluJb SINE Alu 6 329 0 354 291 75 65 chr17 72870936 72871045 -16633508 - MIR SINE MIR -100 162 48 798 157 18 12 chr17 72871171 72871337 -16633216 + MER96B DNA MER1_type? 235 401 -16 252 59 0 0 chr17 72871505 72871539 -16633014 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 532 154 47 34 chr17 72871681 72871830 -16632723 + L1MA7 LINE L1 6140 6290 -1 2214 97 3 0 chr17 72872819 72873119 -16631434 + AluSx SINE Alu 1 301 -11 2106 107 3 3 chr17 72873337 72873647 -16630906 - AluSx SINE Alu -2 310 1 180 111 0 0 chr17 72873656 72873683 -16630870 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 1450 185 114 62 chr17 72873851 72874213 -16630340 - MLT1C LTR MaLR 0 467 77 2157 131 0 3 chr17 72874213 72874512 -16630041 + AluJb SINE Alu 9 298 -14 1450 185 114 62 chr17 72874512 72874586 -16629967 - MLT1C LTR MaLR -390 77 8 473 239 134 142 chr17 72874704 72875117 -16629436 + L2 LINE L2 2632 3047 -266 1772 145 0 51 chr17 72875117 72875428 -16629125 + AluJo SINE Alu 1 295 -17 473 239 134 142 chr17 72875428 72875573 -16628980 + L2 LINE L2 3047 3151 -162 2205 111 0 0 chr17 72875573 72875852 -16628701 - AluSg SINE Alu -31 279 1 473 239 134 142 chr17 72875852 72876010 -16628543 + L2 LINE L2 3151 3309 -4 232 297 14 54 chr17 72875983 72876057 -16628496 - L2 LINE L2 -7 3306 3236 * 493 199 243 7 chr17 72876150 72876286 -16628267 - MIR SINE MIR -74 188 21 2429 88 0 0 chr17 72876290 72876595 -16627958 - AluSx SINE Alu -7 305 1 1944 120 57 20 chr17 72876595 72876896 -16627657 - AluSx SINE Alu 0 312 1 198 0 0 0 chr17 72877492 72877514 -16627039 + (TTA)n Simple_repeat Simple_repeat 3 24 0 689 197 16 0 chr17 72877521 72877643 -16626910 - FAM SINE Alu -26 159 36 1484 159 126 0 chr17 72877692 72877962 -16626591 - AluJo SINE Alu -8 304 1 736 222 176 49 chr17 72878285 72878591 -16625962 + L2 LINE L2 2966 3310 -3 195 42 0 0 chr17 72878690 72878714 -16625839 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1268 92 15 46 chr17 72878763 72878879 -16625674 - MER30B DNA MER1_type 0 190 81 2281 56 3 53 chr17 72878879 72879217 -16625336 - AluY SINE Alu 0 311 1 1268 92 15 46 chr17 72879217 72879296 -16625257 - MER30B DNA MER1_type -109 81 1 2346 103 3 0 chr17 72880067 72880367 -16624186 + AluSx SINE Alu 1 301 -11 1661 184 21 0 chr17 72880465 72880753 -16623800 - AluJo SINE Alu -18 294 1 628 160 7 120 chr17 72880755 72880905 -16623648 - AluJo/FLAM SINE Alu -169 133 1 1851 123 76 4 chr17 72880916 72881193 -16623360 - AluSx SINE Alu -9 303 7 2193 113 10 0 chr17 72881712 72882005 -16622548 - AluSq SINE Alu -17 296 1 183 80 0 0 chr17 72882196 72882221 -16622332 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2475 71 3 0 chr17 72882282 72882578 -16621975 + AluSx SINE Alu 1 297 -15 366 327 9 0 chr17 72882730 72882837 -16621716 - L1ME4a LINE L1 -12 6109 6002 1883 155 36 16 chr17 72882863 72883167 -16621386 - AluJb SINE Alu -2 310 1 955 199 0 6 chr17 72883265 72883441 -16621112 + FAM SINE Alu 1 175 0 2306 99 0 7 chr17 72883912 72884214 -16620339 + AluY SINE Alu 1 300 -11 4937 65 7 0 chr17 72884677 72885297 -16619256 - L1PA8A LINE L1 -2 6129 5506 916 144 6 6 chr17 72885430 72885590 -16618963 + MER58B DNA MER1_type 173 332 -9 1937 158 3 28 chr17 72885591 72885908 -16618645 + AluJo SINE Alu 2 310 -2 270 256 0 0 chr17 72885916 72885994 -16618559 + GA-rich Low_complexity Low_complexity 1 78 0 396 0 0 0 chr17 72886156 72886200 -16618353 + (TG)n Simple_repeat Simple_repeat 1 44 0 616 215 150 57 chr17 72886231 72886585 -16617968 - LTR7 LTR ERV1 -63 387 1 909 116 0 0 chr17 72886585 72886706 -16617847 + AluSg/x SINE Alu 180 300 -10 700 147 54 23 chr17 72886735 72886864 -16617689 + AluJo SINE Alu 5 137 -175 331 280 140 0 chr17 72886864 72886971 -16617582 - MIR3 SINE MIR -80 128 7 1840 165 0 10 chr17 72887252 72887549 -16617004 - AluSx SINE Alu -18 294 1 426 85 0 0 chr17 72887578 72887637 -16616916 + (TTA)n Simple_repeat Simple_repeat 2 60 0 303 233 58 58 chr17 72887851 72887887 -16616666 - L1MCa LINE L1 -4355 2071 2036 2764 39 0 0 chr17 72887887 72888198 -16616355 + AluY SINE Alu 1 311 0 303 233 58 58 chr17 72888198 72888264 -16616289 - L1MCa LINE L1 -4389 2037 1969 180 0 0 0 chr17 72888816 72888836 -16615717 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 218 296 80 0 chr17 72888992 72889080 -16615473 + L2 LINE L2 632 726 -2588 2024 118 49 0 chr17 72889117 72889404 -16615149 - AluSq SINE Alu -2 311 11 380 290 16 48 chr17 72890776 72890843 -16613710 - L2 LINE L2 -2 3311 3248 1470 126 175 0 chr17 72890843 72891089 -16613464 + AluSx SINE Alu 3 291 -21 380 290 16 48 chr17 72891089 72891145 -16613408 - L2 LINE L2 -65 3248 3192 1948 108 12 90 chr17 72891317 72891650 -16612903 + AluSx SINE Alu 1 307 -5 1260 302 129 20 chr17 72891653 72892385 -16612168 - L2 LINE L2 -580 2734 1915 1012 159 40 79 chr17 72892385 72892563 -16611990 + MER20 DNA MER1_type 2 171 -48 2112 98 56 3 chr17 72892563 72892848 -16611705 + AluSg SINE Alu 1 300 -10 1012 159 40 79 chr17 72892848 72892896 -16611657 + MER20 DNA MER1_type 171 219 0 1260 302 129 20 chr17 72892896 72892921 -16611632 - L2 LINE L2 -1399 1915 1894 329 250 198 0 chr17 72893625 72893721 -16610832 + L2 LINE L2 3158 3272 0 781 218 27 32 chr17 72895230 72895371 -16609182 + MER20 DNA MER1_type 1 142 -77 1927 154 0 40 chr17 72895371 72895695 -16608858 + AluJo SINE Alu 1 311 -1 781 218 27 32 chr17 72895695 72895773 -16608780 + MER20 DNA MER1_type 142 219 0 280 303 66 0 chr17 72895836 72895912 -16608641 - L2 LINE L2 -4 3268 3188 2392 94 3 3 chr17 72896958 72897266 -16607287 + AluSx SINE Alu 1 308 -4 2138 118 3 3 chr17 72897268 72897564 -16606989 + AluSx SINE Alu 1 296 -16 216 275 14 43 chr17 72897708 72897777 -16606776 - L2 LINE L2 -210 3062 2996 386 281 132 28 chr17 72897783 72898075 -16606478 - L1ME4a LINE L1 0 6121 5861 1594 160 67 11 chr17 72898075 72898385 -16606168 + AluJo SINE Alu 1 325 0 386 281 132 28 chr17 72898385 72898591 -16605962 - L1ME4a LINE L1 -260 5861 5570 2041 121 48 0 chr17 72899678 72899967 -16604586 + AluSx SINE Alu 1 303 -9 272 241 0 0 chr17 72900319 72900373 -16604180 + MIR SINE MIR 199 252 -10 2375 90 33 0 chr17 72900986 72901285 -16603268 - AluSx SINE Alu -3 309 1 375 297 76 28 chr17 72901402 72901547 -16603006 + MER5A DNA MER1_type 4 155 -34 2562 74 0 0 chr17 72901619 72901929 -16602624 + AluSp SINE Alu 1 310 -3 2178 124 7 3 chr17 72902403 72902709 -16601844 + AluSq SINE Alu 1 307 -6 1174 169 106 20 chr17 72903108 72903241 -16601312 - AluJb SINE Alu -35 277 157 213 65 0 0 chr17 72903241 72903272 -16601281 + (TG)n Simple_repeat Simple_repeat 2 32 0 1174 169 106 20 chr17 72903272 72903393 -16601160 - AluJb SINE Alu -155 157 1 407 252 130 17 chr17 72903396 72903511 -16601042 - MIR SINE MIR -112 150 23 1611 155 22 84 chr17 72903849 72904171 -16600382 - AluJb SINE Alu -10 302 1 293 190 69 0 chr17 72904288 72904346 -16600207 - MIR SINE MIR -154 108 47 1749 164 31 7 chr17 72905439 72905726 -16598827 + AluJo SINE Alu 1 294 -18 445 128 216 0 chr17 72906045 72906147 -16598406 - MER21B LTR ERV1 -111 752 629 858 150 0 0 chr17 72906163 72906283 -16598270 + AluSq/x SINE Alu 1 120 -193 864 215 54 15 chr17 72906309 72906514 -16598039 - MER21B LTR ERV1 -288 575 363 804 257 19 55 chr17 72906544 72906801 -16597752 - MER21B LTR ERV1 -615 248 1 194 355 13 0 chr17 72906801 72906877 -16597676 + MIR SINE MIR 180 256 -6 2412 94 0 7 chr17 72907002 72907311 -16597242 - AluSx SINE Alu -5 307 1 2132 133 0 10 chr17 72907791 72908092 -16596461 + AluSx SINE Alu 1 298 -14 1242 172 24 44 chr17 72908093 72908390 -16596163 - L1MB8 LINE L1 -9 6169 5879 1564 141 122 82 chr17 72909395 72909560 -16594993 + MLT1C LTR MaLR 1 158 -216 2035 117 39 0 chr17 72909560 72909843 -16594710 + AluSx SINE Alu 1 294 -18 1564 141 122 82 chr17 72909843 72910105 -16594448 + MLT1C LTR MaLR 158 351 -23 336 298 41 16 chr17 72911115 72911194 -16593359 - MIR SINE MIR -22 240 156 2319 97 0 7 chr17 72911194 72911492 -16593061 - AluSg SINE Alu -14 296 1 336 298 41 16 chr17 72911492 72911533 -16593020 - MIR SINE MIR -106 156 117 1692 155 65 51 chr17 72911598 72911836 -16592717 - MLT1A1 LTR MaLR -1 364 131 2405 85 3 7 chr17 72911836 72912142 -16592411 + AluY SINE Alu 1 305 -6 1692 155 65 51 chr17 72912142 72912211 -16592342 - MLT1A1 LTR MaLR -234 131 49 1536 174 44 44 chr17 72912211 72912505 -16592048 + AluJo SINE Alu 1 294 -18 1692 155 65 51 chr17 72912505 72912550 -16592003 - MLT1A1 LTR MaLR -316 49 6 238 266 76 25 chr17 72912578 72912657 -16591896 + MIR SINE MIR 87 169 -93 187 281 293 0 chr17 72912657 72912739 -16591814 + MER5B DNA MER1_type 1 106 -72 742 169 44 169 chr17 72912781 72913143 -16591410 - MLT1C LTR MaLR -73 317 1 311 0 26 0 chr17 72913715 72913754 -16590799 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 464 314 60 32 chr17 72914026 72914211 -16590342 + MIR3 SINE MIR 6 195 -13 2071 148 52 25 chr17 72914696 72915210 -16589343 + LTR27 LTR ERV1 2 501 0 483 231 126 26 chr17 72915755 72916177 -16588376 - MLT1H LTR MaLR -7 588 63 512 129 0 166 chr17 72916327 72916433 -16588120 - L1MA10 LINE L1 -32 6302 6231 1919 150 0 10 chr17 72916433 72916733 -16587820 - AluSx SINE Alu -6 306 10 512 129 0 166 chr17 72916733 72916789 -16587764 - L1MA10 LINE L1 -103 6231 6167 288 265 15 0 chr17 72916988 72917056 -16587497 - MIR SINE MIR 0 262 194 2200 128 0 13 chr17 72917062 72917405 -16587148 - AluSx SINE Alu 0 312 1 1943 100 76 45 chr17 72917417 72917707 -16586846 - AluSg SINE Alu -11 299 1 2244 86 7 0 chr17 72918276 72918578 -16585975 + AluSg SINE Alu 1 304 0 1572 219 100 61 chr17 72918665 72918731 -16585822 - L1MB7 LINE L1 0 6184 6122 2127 125 28 0 chr17 72918731 72919020 -16585533 + AluSx SINE Alu 1 297 -15 1572 219 100 61 chr17 72919020 72919327 -16585226 - L1MB7 LINE L1 -62 6122 5779 679 159 30 15 chr17 72919327 72919459 -16585094 - L1PA16 LINE L1 0 6166 6033 1572 219 100 61 chr17 72919459 72919642 -16584911 - L1MB7 LINE L1 -405 5779 5605 285 65 87 0 chr17 72919634 72919680 -16584873 - L1P LINE L1 -779 5395 5346 * 354 143 0 0 chr17 72919680 72919743 -16584810 - L1MB7 LINE L1 -356 5828 5766 2208 172 54 9 chr17 72919747 72919847 -16584706 - MER66B LTR ERV1 -9 477 383 2443 72 7 3 chr17 72919847 72920152 -16584401 + AluY SINE Alu 1 306 -5 2208 172 54 9 chr17 72920152 72920493 -16584060 - MER66B LTR ERV1 -103 383 16 376 169 0 0 chr17 72920493 72920507 -16584046 - L1MB7 LINE L1 -359 5825 5812 2155 102 0 7 chr17 72920507 72920824 -16583729 - AluSx SINE Alu 0 315 1 376 169 0 0 chr17 72920824 72920895 -16583658 - L1MB7 LINE L1 -371 5813 5755 * 1814 106 42 0 chr17 72920891 72921174 -16583379 - L1P4 LINE L1 -526 5640 5346 2465 94 0 3 chr17 72921181 72921489 -16583064 + AluSx SINE Alu 1 307 -5 1573 192 9 12 chr17 72921490 72921628 -16582925 - L1MB7 LINE L1 -356 5828 5691 2003 154 0 20 chr17 72921628 72921952 -16582601 - AluJb SINE Alu 0 312 1 1573 192 9 12 chr17 72921952 72922157 -16582396 - L1MB7 LINE L1 -493 5691 5486 193 264 75 0 chr17 72922260 72922313 -16582240 - L2 LINE L2 -3 3269 3213 2194 111 14 7 chr17 72922405 72922702 -16581851 - AluSx SINE Alu -13 299 1 216 0 0 0 chr17 72922710 72922734 -16581819 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 773 162 0 0 chr17 72922737 72922854 -16581699 - FLAM_C SINE Alu -25 118 2 1738 135 0 0 chr17 72923806 72924043 -16580510 + AluJb SINE Alu 1 237 -75 2067 142 0 26 chr17 72924250 72924561 -16579992 + AluSx SINE Alu 2 304 -8 1418 228 122 10 chr17 72924583 72925000 -16579553 - L1ME3 LINE L1 0 6162 5699 838 159 8 0 chr17 72925000 72925132 -16579421 + AluJo/FLAM SINE Alu 1 133 -169 273 128 21 0 chr17 72925086 72925133 -16579420 + FLAM_A SINE Alu 86 133 0 2624 58 3 0 chr17 72925141 72925451 -16579102 + AluY SINE Alu 1 311 0 1023 213 0 23 chr17 72925451 72925666 -16578887 - L1MB7 LINE L1 -19 6160 5950 2365 84 0 29 chr17 72925666 72925975 -16578578 - AluSp SINE Alu -13 300 1 2221 124 3 6 chr17 72926349 72926663 -16577890 + AluSq SINE Alu 1 313 0 2371 97 0 10 chr17 72927025 72927334 -16577219 + AluSx SINE Alu 1 306 -6 2246 83 0 21 chr17 72927456 72927745 -16576808 - AluSc SINE Alu -26 283 1 2134 135 3 0 chr17 72928490 72928793 -16575760 - AluSx SINE Alu -8 304 1 2032 113 11 11 chr17 72928876 72929158 -16575395 + AluSx SINE Alu 1 282 -30 270 0 0 0 chr17 72929161 72929191 -16575362 + (TAA)n Simple_repeat Simple_repeat 2 31 0 198 71 0 0 chr17 72929951 72929979 -16574574 + (CA)n Simple_repeat Simple_repeat 1 28 0 2384 70 0 55 chr17 72930228 72930556 -16573997 + AluSg SINE Alu 1 310 0 21 0 0 0 chr17 72930570 72930591 -16573962 + AT_rich Low_complexity Low_complexity 1 21 0 1277 79 11 0 chr17 72930591 72930769 -16573784 - L1MA1 LINE L1 -6 6296 6117 1975 156 7 0 chr17 72930781 72931076 -16573477 + AluSx SINE Alu 1 297 -15 2366 94 0 0 chr17 72931291 72931588 -16572965 + AluSc SINE Alu 1 297 -12 2624 52 0 3 chr17 72932485 72932794 -16571759 + AluY SINE Alu 2 309 -2 2286 90 0 13 chr17 72934129 72934429 -16570124 - AluSg SINE Alu -14 296 1 1827 165 0 20 chr17 72934491 72934794 -16569759 + AluJo SINE Alu 2 298 -14 1169 145 16 0 chr17 72935478 72935664 -16568889 + MER5A DNA MER1_type 1 189 0 356 153 0 0 chr17 72935772 72935831 -16568722 + Alu SINE Alu 243 301 -1 395 197 204 36 chr17 72935919 72936056 -16568497 - MER91A DNA MER1_type -35 161 2 2531 68 0 0 chr17 72936882 72937177 -16567376 + AluSq SINE Alu 6 300 -13 280 300 75 12 chr17 72937805 72937890 -16566663 + L1M4 LINE L1 5211 5289 -857 1968 161 13 0 chr17 72937890 72938194 -16566359 + AluJo SINE Alu 1 308 -4 280 300 75 12 chr17 72938194 72938268 -16566285 + L1M4 LINE L1 5289 5380 -766 2373 94 3 10 chr17 72938475 72938783 -16565770 + AluSx SINE Alu 1 306 -6 2370 88 7 7 chr17 72939439 72939747 -16564806 + AluSq SINE Alu 1 308 -5 2438 99 0 0 chr17 72940255 72940567 -16563986 + AluSx SINE Alu 1 312 0 2249 114 0 3 chr17 72940673 72940972 -16563581 - AluSx SINE Alu -14 298 1 676 269 95 3 chr17 72941000 72941294 -16563259 - L1ME4a LINE L1 0 6121 5801 2300 109 0 0 chr17 72942378 72942690 -16561863 - AluSx SINE Alu 0 312 1 988 138 181 21 chr17 72942717 72942905 -16561648 - MER20 DNA MER1_type 0 219 2 2421 81 3 0 chr17 72944616 72944911 -16559642 + AluSp SINE Alu 1 296 -17 2329 78 3 0 chr17 72945480 72945820 -16558733 + AluSp SINE Alu 1 341 0 2522 78 0 0 chr17 72946725 72947034 -16557519 + AluSq SINE Alu 1 309 -4 209 114 0 68 chr17 72947354 72947382 -16557171 + (TAA)n Simple_repeat Simple_repeat 1 28 -13 2168 114 0 0 chr17 72947382 72947692 -16556861 + AluSg SINE Alu 1 310 0 209 114 0 68 chr17 72947692 72947706 -16556847 + (TAA)n Simple_repeat Simple_repeat 28 41 0 1774 176 0 13 chr17 72948282 72948589 -16555964 + AluJo SINE Alu 1 303 -9 219 215 46 0 chr17 72948762 72948827 -16555726 + (CA)n Simple_repeat Simple_repeat 1 68 0 276 53 0 0 chr17 72952166 72952204 -16552349 + (TA)n Simple_repeat Simple_repeat 1 38 0 318 67 0 0 chr17 72953833 72953878 -16550675 + (TC)n Simple_repeat Simple_repeat 1 45 0 1251 169 0 9 chr17 72954183 72954408 -16550145 + AluSg/x SINE Alu 85 307 -5 2475 49 21 0 chr17 72954418 72954706 -16549847 + AluY SINE Alu 1 294 -17 1921 130 27 20 chr17 72954965 72955266 -16549287 - AluJb SINE Alu -9 303 1 2232 89 3 16 chr17 72955802 72956105 -16548448 + AluSc SINE Alu 1 299 -10 781 153 21 28 chr17 72956247 72956391 -16548162 + FLAM_C SINE Alu 1 143 0 897 272 17 20 chr17 72957452 72957753 -16546800 - L1ME4a LINE L1 -298 5823 5524 282 116 0 0 chr17 72958216 72958259 -16546294 + (A)n Simple_repeat Simple_repeat 1 43 0 2095 125 3 7 chr17 72958573 72958877 -16545676 - AluSx SINE Alu -9 303 1 1187 166 14 168 chr17 72958920 72959036 -16545517 - L1MD2 LINE L1 -19 6340 6208 2287 100 0 10 chr17 72959036 72959335 -16545218 + AluSx SINE Alu 1 296 -16 1187 166 14 168 chr17 72959335 72959403 -16545150 - L1MD2 LINE L1 -151 6208 6131 1946 140 7 7 chr17 72959403 72959695 -16544858 + AluJb SINE Alu 1 292 -20 1187 166 14 168 chr17 72959695 72959896 -16544657 - L1MD2 LINE L1 -228 6131 5984 42 36 0 0 chr17 72960010 72960066 -16544487 + AT_rich Low_complexity Low_complexity 1 56 0 2245 95 3 0 chr17 72960161 72960446 -16544107 - AluSx SINE Alu -26 286 1 1908 125 6 52 chr17 72960452 72960523 -16544030 - L1MB4 LINE L1 -44 6136 6063 2039 127 34 0 chr17 72960523 72960814 -16543739 - AluSx SINE Alu -11 301 1 1908 125 6 52 chr17 72960814 72960963 -16543590 - L1MB4 LINE L1 -117 6063 5933 2819 78 8 0 chr17 72960963 72961324 -16543229 - THE1B LTR MaLR 0 364 1 1908 125 6 52 chr17 72961324 72961430 -16543123 - L1MB4 LINE L1 -247 5933 5824 2198 151 37 42 chr17 72961494 72961883 -16542670 - MSTB1 LTR MaLR 0 432 44 2287 114 0 0 chr17 72961883 72962180 -16542373 + AluSx SINE Alu 3 299 -13 2198 151 37 42 chr17 72962180 72962222 -16542331 - MSTB1 LTR MaLR -388 44 3 1953 175 0 0 chr17 72962271 72962580 -16541973 - AluJb SINE Alu -3 309 1 295 207 0 0 chr17 72962620 72962678 -16541875 + MIR SINE MIR 81 138 -70 2038 159 0 0 chr17 72962823 72963124 -16541429 + AluJo SINE Alu 1 301 -11 2299 98 3 19 chr17 72963203 72963518 -16541035 + AluSg SINE Alu 1 310 0 1892 130 30 3 chr17 72963528 72963827 -16540726 + AluSx SINE Alu 3 309 -3 1549 160 28 38 chr17 72964491 72964815 -16539738 + AluJb SINE Alu 1 321 0 1473 181 7 34 chr17 72965426 72965718 -16538835 - AluJo SINE Alu -18 294 11 2261 100 3 3 chr17 72965720 72966030 -16538523 - AluSg SINE Alu 0 310 1 22 35 0 0 chr17 72966242 72966271 -16538282 + AT_rich Low_complexity Low_complexity 1 29 0 1933 135 38 0 chr17 72966725 72967014 -16537539 + AluSx SINE Alu 1 300 -12 224 146 0 21 chr17 72967245 72967293 -16537260 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 2130 93 26 38 chr17 72967357 72967670 -16536883 + AluSq SINE Alu 1 309 -4 640 130 179 68 chr17 72968006 72968109 -16536444 + MER53 DNA DNA 10 100 -89 2228 118 0 3 chr17 72968109 72968398 -16536155 + AluSx SINE Alu 1 288 -24 204 97 0 0 chr17 72968398 72968429 -16536124 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 640 130 179 68 chr17 72968429 72968486 -16536067 + MER53 DNA DNA 99 189 0 548 283 112 19 chr17 72968489 72968758 -16535795 - L2 LINE L2 -514 2800 2507 * 830 301 105 27 chr17 72968754 72969279 -16535274 + L2 LINE L2 2178 2743 -571 234 0 0 0 chr17 72969279 72969305 -16535248 + (T)n Simple_repeat Simple_repeat 1 26 0 2013 112 0 50 chr17 72969306 72969629 -16534924 + AluSg SINE Alu 1 307 -3 3739 148 37 0 chr17 72969629 72970257 -16534296 + L1MB3 LINE L1 5490 6140 -43 2161 122 0 0 chr17 72970257 72970553 -16534000 + AluSx SINE Alu 1 296 -16 834 148 0 15 chr17 72970561 72970696 -16533857 + FLAM_A SINE Alu 1 133 0 973 64 0 64 chr17 72970720 72970860 -16533693 + AluSc SINE Alu 1 131 -178 310 74 37 0 chr17 72970881 72970935 -16533618 + L1MB4 LINE L1 6125 6180 0 2326 79 3 23 chr17 72972014 72972319 -16532234 + AluSq SINE Alu 1 299 -14 2379 78 10 3 chr17 72972319 72972628 -16531925 + AluY SINE Alu 1 311 0 183 215 0 123 chr17 72972645 72972710 -16531843 + L2 LINE L2 2589 2645 -669 2013 139 34 0 chr17 72972832 72973127 -16531426 + AluJb SINE Alu 1 305 -7 1118 153 0 23 chr17 72973337 72973514 -16531039 + AluJo SINE Alu 75 247 -65 1360 128 0 0 chr17 72975676 72975863 -16528690 + AluSx SINE Alu 1 187 -125 1983 106 0 0 chr17 72975864 72976118 -16528435 - AluSg SINE Alu -56 254 1 2461 80 3 0 chr17 72976860 72977160 -16527393 - AluSq SINE Alu -12 301 1 230 297 0 16 chr17 72977263 72977327 -16527226 + MIR3 SINE MIR 125 187 -21 23 54 0 0 chr17 72977890 72977927 -16526626 + AT_rich Low_complexity Low_complexity 1 37 0 208 233 219 0 chr17 72978715 72978788 -16525765 + MIR SINE MIR 43 131 -77 253 179 125 0 chr17 72978867 72978923 -16525630 - MER103 DNA DNA -15 151 89 1627 159 10 30 chr17 72979254 72979550 -16525003 - AluJo SINE Alu -22 290 1 2535 72 3 0 chr17 72979565 72979870 -16524683 - AluSp SINE Alu -6 307 2 2314 110 3 0 chr17 72979937 72980246 -16524307 - AluSg SINE Alu 0 310 1 977 214 16 0 chr17 72980285 72980477 -16524076 + AluSg/x SINE Alu 98 292 -18 2242 107 7 0 chr17 72980892 72981191 -16523362 - AluSx SINE Alu -11 301 1 2281 82 10 20 chr17 72981339 72981643 -16522910 + AluY SINE Alu 1 301 -10 226 200 100 17 chr17 72982265 72982325 -16522228 + MER116 DNA Mariner 8 72 -8 1654 158 20 40 chr17 72982363 72982667 -16521886 + AluJo SINE Alu 7 304 -8 2187 75 18 4 chr17 72983951 72984229 -16520324 + AluSp SINE Alu 14 295 -18 1325 137 188 19 chr17 72984242 72984498 -16520055 + AluSg SINE Alu 2 300 0 2302 85 0 0 chr17 72984538 72984845 -16519708 + AluY SINE Alu 1 307 0 314 304 79 44 chr17 72984850 72985077 -16519476 - MIR SINE MIR -27 235 1 477 265 35 66 chr17 72985175 72985432 -16519121 - L1MC4a LINE L1 -1817 5991 5743 269 125 0 0 chr17 72985448 72985496 -16519057 - L1MB5 LINE L1 0 6174 6127 208 173 39 19 chr17 72985519 72985571 -16518982 + T-rich Low_complexity Low_complexity 2 54 0 928 199 13 69 chr17 72985619 72985642 -16518911 - L1MB5 LINE L1 -85 6089 6066 2216 98 0 71 chr17 72985642 72985978 -16518575 - AluSq SINE Alu -1 312 1 928 199 13 69 chr17 72985978 72986144 -16518409 - L1MB5 LINE L1 -108 6066 5913 2402 65 0 3 chr17 72986144 72986438 -16518115 - AluY SINE Alu -18 293 1 928 199 13 69 chr17 72986438 72986478 -16518075 - L1MB5 LINE L1 -261 5913 5872 388 160 3 0 chr17 72986526 72986598 -16517955 - AluJ/FLAM SINE Alu -242 60 2 4274 207 126 34 chr17 72986598 72986797 -16517756 - L1MB5 LINE L1 -300 5874 5695 2252 85 0 14 chr17 72986797 72987119 -16517434 - AluY SINE Alu 0 311 1 4274 207 126 34 chr17 72987119 72987204 -16517349 - L1MB5 LINE L1 -479 5695 5619 1202 126 0 0 chr17 72987204 72987378 -16517175 - L1MA3 LINE L1 0 6305 6132 4274 207 126 34 chr17 72987378 72987811 -16516742 - L1MB5 LINE L1 -555 5619 5228 2188 34 45 0 chr17 72987811 72988075 -16516478 - AluY SINE Alu 0 311 36 4274 207 126 34 chr17 72988075 72988760 -16515793 - L1MB5 LINE L1 -946 5228 4608 2045 117 7 32 chr17 72988760 72989068 -16515485 + AluSx SINE Alu 1 300 -12 4274 207 126 34 chr17 72989068 72989839 -16514714 - L1MB5 LINE L1 -1566 4608 3483 446 147 0 13 chr17 72990156 72990263 -16514290 - FLAM_A SINE Alu 0 142 46 865 224 0 6 chr17 72990346 72990520 -16514033 + FAM SINE Alu 2 174 -1 217 343 10 10 chr17 72990823 72990925 -16513628 + L2 LINE L2 3153 3254 -18 30 69 0 0 chr17 72991097 72991155 -16513398 + AT_rich Low_complexity Low_complexity 1 58 0 894 116 0 27 chr17 72991849 72991995 -16512558 + FLAM_C SINE Alu 1 142 -1 830 104 0 83 chr17 72994234 72994378 -16510175 + FLAM_C SINE Alu 1 132 -1 2162 113 7 0 chr17 72995639 72995930 -16508623 + AluSx SINE Alu 1 293 -19 2405 88 3 0 chr17 72996014 72996310 -16508243 + AluSp SINE Alu 2 298 -15 1066 197 22 95 chr17 72996583 72996756 -16507797 - AluJo SINE Alu -9 303 162 2299 114 0 0 chr17 72996756 72997053 -16507500 - AluSx SINE Alu -13 299 3 1066 197 22 95 chr17 72997053 72997194 -16507359 - AluJo SINE Alu -150 162 12 253 0 26 26 chr17 72997230 72997268 -16507285 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1879 133 32 4 chr17 72997270 72997549 -16507004 - AluSx SINE Alu -25 287 1 1166 302 98 4 chr17 72997578 72998118 -16506435 - L1MC4a LINE L1 -1964 5844 5254 251 271 37 0 chr17 72998303 72998410 -16506143 - L1P LINE L1 -1116 5030 4920 21 0 0 0 chr17 72998619 72998640 -16505913 + AT_rich Low_complexity Low_complexity 1 21 0 1440 146 10 94 chr17 72998650 72998958 -16505595 + AluJo SINE Alu 6 287 -25 23 33 0 0 chr17 72998958 72998988 -16505565 + AT_rich Low_complexity Low_complexity 1 30 0 1970 155 3 3 chr17 73000299 73000596 -16503957 + AluSx SINE Alu 1 297 -15 2372 77 10 7 chr17 73000598 73000897 -16503656 + AluSp SINE Alu 1 300 -13 422 18 0 18 chr17 73000991 73001047 -16503506 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1728 97 0 9 chr17 73001060 73001286 -16503267 - AluY SINE Alu -87 224 1 1670 110 0 0 chr17 73001316 73001534 -16503019 - AluSx SINE Alu -94 218 1 2054 135 0 16 chr17 73001960 73002264 -16502289 - AluSx SINE Alu -11 301 3 2214 117 3 0 chr17 73002680 73002980 -16501573 + AluSq SINE Alu 1 301 -12 974 227 63 49 chr17 73003142 73003490 -16501063 - L1MC4 LINE L1 -1 8041 7689 1621 171 23 29 chr17 73003941 73004251 -16500302 + AluJb SINE Alu 5 312 0 1991 135 7 0 chr17 73004264 73004545 -16500008 + AluSx SINE Alu 7 289 -23 1758 176 14 3 chr17 73005010 73005305 -16499248 - AluSx SINE Alu -14 298 1 2426 98 0 3 chr17 73005315 73005621 -16498932 - AluSg SINE Alu -5 305 1 1613 101 9 0 chr17 73005697 73005914 -16498639 + AluSg/x SINE Alu 84 302 -10 369 189 74 32 chr17 73005915 73006010 -16498543 - LTR8 LTR ERV1 -592 99 1 959 144 46 0 chr17 73006016 73006189 -16498364 + L1MA8 LINE L1 6078 6258 -33 341 175 14 4 chr17 73006239 73006298 -16498255 + AluJo SINE Alu 1 41 -262 3825 208 95 56 chr17 73006298 73007390 -16497163 + LTR28 LTR ERV1 1 636 0 1365 143 65 0 chr17 73007394 73007625 -16496928 + AluJo SINE Alu 50 295 -17 2362 101 7 3 chr17 73007686 73007993 -16496560 - AluSc SINE Alu -1 308 1 387 292 84 20 chr17 73008292 73008461 -16496092 + L2 LINE L2 2196 2381 -933 2326 111 0 0 chr17 73008461 73008767 -16495786 - AluSp SINE Alu -7 306 1 387 292 84 20 chr17 73008767 73008799 -16495754 + L2 LINE L2 2381 2410 -904 272 293 0 27 chr17 73008890 73008965 -16495588 + LTR28 LTR ERV1 827 899 -121 285 274 83 25 chr17 73008981 73009138 -16495415 + L2 LINE L2 2560 2725 -589 776 179 0 0 chr17 73009229 73009363 -16495190 + FLAM_C SINE Alu 6 139 -4 2027 128 0 4 chr17 73009367 73009648 -16494905 + AluSx SINE Alu 1 280 -32 254 98 20 0 chr17 73009648 73009699 -16494854 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1709 147 11 62 chr17 73009709 73010062 -16494491 + L1MB5 LINE L1 5827 6161 -13 1823 154 34 0 chr17 73010121 73010413 -16494140 + AluJb SINE Alu 1 302 -10 2086 95 0 28 chr17 73010567 73010850 -16493703 + AluSg SINE Alu 25 299 -11 1531 177 134 45 chr17 73010850 73010997 -16493556 + LTR48 LTR ERV1 28 160 -627 1892 219 37 98 chr17 73010997 73011350 -16493203 + LTR8 LTR ERV1 1 287 -404 2548 66 0 0 chr17 73011350 73011653 -16492900 - AluY SINE Alu -8 303 1 1892 219 37 98 chr17 73011653 73012035 -16492518 + LTR8 LTR ERV1 287 691 0 1531 177 134 45 chr17 73012035 73012311 -16492242 + LTR48 LTR ERV1 160 489 -298 266 195 149 0 chr17 73012337 73012424 -16492129 + LTR48 LTR ERV1 641 740 -47 1109 151 0 78 chr17 73012432 73012650 -16491903 - AluSg/x SINE Alu -10 302 102 1879 130 0 0 chr17 73012650 73012919 -16491634 + AluSx SINE Alu 35 303 -9 2141 139 0 0 chr17 73012985 73013288 -16491265 - AluSx SINE Alu -9 303 1 2336 101 0 0 chr17 73013579 73013876 -16490677 - AluSq SINE Alu -16 297 1 1928 131 50 3 chr17 73014153 73014436 -16490117 - AluSx SINE Alu -16 296 1 1394 225 0 31 chr17 73014464 73014753 -16489800 - AluJo SINE Alu -30 282 3 747 154 0 0 chr17 73014754 73014871 -16489682 - FLAM_C SINE Alu -8 135 19 346 255 0 29 chr17 73014872 73014986 -16489567 - MIR SINE MIR -63 145 49 2298 95 0 22 chr17 73016051 73016185 -16488368 + AluSg SINE Alu 1 136 -174 2455 59 0 13 chr17 73016185 73016518 -16488035 + AluY SINE Alu 1 311 0 2298 95 0 22 chr17 73016518 73016698 -16487855 + AluSg SINE Alu 136 308 -2 23 33 0 0 chr17 73016946 73016976 -16487577 + AT_rich Low_complexity Low_complexity 1 30 0 288 196 0 72 chr17 73017017 73017114 -16487439 + L1MC5 LINE L1 7441 7530 -431 621 176 56 16 chr17 73017114 73017239 -16487314 + AluJo/FLAM SINE Alu 2 131 -171 2423 54 0 17 chr17 73017242 73017569 -16486984 + AluY SINE Alu 1 311 0 2072 125 9 34 chr17 73017681 73018001 -16486552 - AluSx SINE Alu 0 312 1 1280 200 29 4 chr17 73018082 73018357 -16486196 - AluJo SINE Alu -30 282 1 237 271 200 0 chr17 73018434 73018504 -16486049 + L1ME4a LINE L1 5518 5601 -520 2311 107 3 0 chr17 73018510 73018809 -16485744 + AluSx SINE Alu 1 300 -12 995 145 6 30 chr17 73018809 73018975 -16485578 + AluSc SINE Alu 132 293 -16 690 268 125 4 chr17 73018988 73019260 -16485293 + L1ME4a LINE L1 5611 5915 -206 2487 77 3 3 chr17 73019339 73019649 -16484904 - AluSg SINE Alu 0 310 1 207 0 0 0 chr17 73019866 73019889 -16484664 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2076 128 0 7 chr17 73019889 73020178 -16484375 - AluSx SINE Alu -25 287 1 2291 132 28 6 chr17 73020811 73021167 -16483386 + THE1B LTR MaLR 1 364 0 334 188 10 98 chr17 73021509 73021668 -16482885 - MLT1J LTR MaLR -308 180 1 1681 197 0 7 chr17 73021725 73022029 -16482524 - AluJb SINE Alu -10 302 1 2082 129 0 16 chr17 73022041 73022350 -16482203 - AluSx SINE Alu -8 304 1 395 303 132 18 chr17 73022400 73022641 -16481912 + L2 LINE L2 2790 3058 -255 2149 136 0 3 chr17 73022641 73022943 -16481610 - AluSx SINE Alu -11 301 1 2179 117 3 13 chr17 73022943 73023251 -16481302 - AluSx SINE Alu -7 305 1 2401 84 0 0 chr17 73023304 73023600 -16480953 - AluSg SINE Alu -10 300 5 190 220 60 20 chr17 73023712 73023762 -16480791 + MIR SINE MIR 204 255 -7 2133 87 7 4 chr17 73023771 73024046 -16480507 - AluSp SINE Alu -37 276 1 2281 85 3 16 chr17 73024046 73024351 -16480202 - AluY SINE Alu -10 301 1 2083 144 0 0 chr17 73024354 73024646 -16479907 - AluSx SINE Alu -20 292 1 2606 119 46 7 chr17 73024829 73025241 -16479312 + MSTA LTR MaLR 1 428 0 2330 84 16 3 chr17 73025558 73025867 -16478686 - AluSq SINE Alu 0 313 1 1832 168 9 19 chr17 73025873 73026188 -16478365 - AluSx SINE Alu 0 312 1 1862 128 92 4 chr17 73026518 73026799 -16477754 - AluSx SINE Alu -6 306 1 2849 29 12 9 chr17 73026933 73027275 -16477278 - L1PA6 LINE L1 0 6154 5812 2336 95 0 16 chr17 73027594 73027909 -16476644 + AluSx SINE Alu 3 312 0 1888 122 66 3 chr17 73028109 73028395 -16476158 + AluSx SINE Alu 1 304 -8 1818 165 3 10 chr17 73028464 73028755 -16475798 - AluJo SINE Alu -23 289 1 1356 104 0 117 chr17 73029524 73029708 -16474845 - AluSg/x SINE Alu -17 295 140 2492 41 0 14 chr17 73029708 73029999 -16474554 - AluY SINE Alu -24 287 1 1356 104 0 117 chr17 73029999 73030036 -16474517 - AluSg/x SINE Alu -172 140 100 2050 170 0 0 chr17 73030036 73030347 -16474206 - AluJb SINE Alu -1 311 1 3088 102 73 68 chr17 73030524 73030570 -16473983 - MER4B LTR ERV1 0 610 566 2272 113 7 0 chr17 73030570 73030880 -16473673 - AluSx SINE Alu 0 312 1 3088 102 73 68 chr17 73030880 73031422 -16473131 - MER4B LTR ERV1 -44 566 19 2110 142 0 19 chr17 73031422 73031740 -16472813 - AluSx SINE Alu 0 312 1 2614 50 0 0 chr17 73032022 73032322 -16472231 + AluY SINE Alu 1 300 -11 1778 168 23 16 chr17 73032542 73032852 -16471701 - AluJo SINE Alu 0 312 1 934 128 0 0 chr17 73033175 73033308 -16471245 + FLAM_C SINE Alu 1 133 0 195 167 0 0 chr17 73033346 73033376 -16471177 + L2 LINE L2 3262 3291 -22 2447 96 0 0 chr17 73033398 73033700 -16470853 + AluSq SINE Alu 1 302 -11 2271 117 0 3 chr17 73033885 73034019 -16470534 + AluSx SINE Alu 1 134 -178 2513 79 3 0 chr17 73034019 73034324 -16470229 + AluSp SINE Alu 1 306 -7 2271 117 0 3 chr17 73034324 73034489 -16470064 + AluSx SINE Alu 134 299 -13 2731 30 0 0 chr17 73034494 73034797 -16469756 + AluYa5 SINE Alu 1 303 -8 1987 162 3 3 chr17 73035266 73035574 -16468979 - AluSx SINE Alu -4 308 1 30 27 0 0 chr17 73035574 73035611 -16468942 + AT_rich Low_complexity Low_complexity 1 37 0 327 208 115 21 chr17 73035611 73035707 -16468846 - MLT2C1 LTR ERVL -143 254 150 1970 127 0 14 chr17 73035731 73036014 -16468539 - AluJb SINE Alu -33 279 1 753 110 7 69 chr17 73036015 73036097 -16468456 - MLT2C1 LTR ERVL -235 162 91 2338 84 47 0 chr17 73036097 73036395 -16468158 + AluSx SINE Alu 1 312 0 753 110 7 69 chr17 73036395 73036457 -16468096 - MLT2C1 LTR ERVL -306 91 27 1765 161 7 4 chr17 73036705 73036985 -16467568 + AluJo SINE Alu 9 289 -23 2366 108 3 0 chr17 73037105 73037411 -16467142 + AluSx SINE Alu 1 307 -5 2550 65 0 0 chr17 73037412 73037718 -16466835 + AluY SINE Alu 1 306 -5 1564 169 3 37 chr17 73037832 73038127 -16466426 + AluJb SINE Alu 14 298 -14 2373 110 0 0 chr17 73038255 73038564 -16465989 - AluSc SINE Alu 0 309 1 195 125 0 0 chr17 73038611 73038651 -16465902 + (TA)n Simple_repeat Simple_repeat 1 40 0 205 200 25 62 chr17 73038677 73038725 -16465828 + (CTTAA)n Simple_repeat Simple_repeat 4 49 -31 1700 160 54 14 chr17 73038725 73039019 -16465534 - AluSg SINE Alu -4 306 1 205 200 25 62 chr17 73039019 73039050 -16465503 + (CTTAA)n Simple_repeat Simple_repeat 49 80 0 326 200 27 40 chr17 73039223 73039298 -16465255 + Alu SINE Alu 1 53 -255 1242 124 6 0 chr17 73039298 73039467 -16465086 - AluSg/x SINE Alu -9 301 132 2141 110 17 0 chr17 73039467 73039757 -16464796 - AluSp SINE Alu -18 295 1 348 178 36 50 chr17 73039762 73039856 -16464697 + L1MCa LINE L1 1995 6984 -1338 222 187 33 0 chr17 73039923 73040014 -16464539 + (TA)n Simple_repeat Simple_repeat 1 94 0 1010 108 0 0 chr17 73040162 73040301 -16464252 - MER54B LTR ERVL -111 682 544 410 86 0 0 chr17 73040335 73040393 -16464160 - MER83B LTR ERV1 -28 350 293 1602 142 76 3 chr17 73041016 73041304 -16463249 - MER83B LTR ERV1 -69 309 1 * 2916 180 30 2 chr17 73041304 73041822 -16462731 - MER54B LTR ERVL -260 533 1 2176 131 0 3 chr17 73041860 73042165 -16462388 + AluSx SINE Alu 1 304 -8 406 78 62 16 chr17 73042302 73042366 -16462187 - AluSc SINE Alu -20 289 223 1535 185 122 28 chr17 73042611 73042973 -16461580 + MSTD LTR MaLR 1 396 0 276 30 0 0 chr17 73043842 73043875 -16460678 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 905 97 5 118 chr17 73044349 73044419 -16460134 + HSMAR2 DNA Mariner 1137 1213 -89 2522 66 0 3 chr17 73044419 73044720 -16459833 - AluSq SINE Alu -9 304 5 905 97 5 118 chr17 73044720 73044835 -16459718 + HSMAR2 DNA Mariner 1213 1301 -1 672 192 34 14 chr17 73044836 73044982 -16459571 - MIR SINE MIR -111 151 3 777 154 4 2 chr17 73045008 73045261 -16459292 + AluJ SINE Alu 1 302 -10 2299 89 0 7 chr17 73045468 73045761 -16458792 + AluY SINE Alu 9 299 -12 201 74 0 0 chr17 73045773 73045800 -16458753 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1719 164 0 0 chr17 73045838 73046107 -16458446 + AluSx SINE Alu 43 311 -1 319 182 23 80 chr17 73046263 73046351 -16458202 - MLT1K LTR MaLR 0 588 506 1858 148 20 23 chr17 73046353 73046657 -16457896 + AluSx SINE Alu 1 303 -9 2295 120 10 0 chr17 73046874 73047182 -16457371 + AluSx SINE Alu 1 311 -1 714 243 68 85 chr17 73047255 73047667 -16456886 + MLT1J2 LTR MaLR 3 407 -43 2066 144 0 3 chr17 73047763 73048062 -16456491 + AluSx SINE Alu 1 298 -14 2454 80 0 10 chr17 73048062 73048376 -16456177 + AluY SINE Alu 1 311 0 358 296 19 13 chr17 73048479 73048638 -16455915 + L1ME LINE L1 5637 5796 -325 180 0 0 0 chr17 73049079 73049099 -16455454 + (CAGGG)n Simple_repeat Simple_repeat 3 22 0 1970 153 3 10 chr17 73049125 73049297 -16455256 - AluSx SINE Alu -6 306 135 2369 78 10 3 chr17 73049297 73049593 -16454960 - AluSp SINE Alu -15 298 1 1970 153 3 10 chr17 73049593 73049728 -16454825 - AluSx SINE Alu -177 135 1 2056 122 7 7 chr17 73049739 73050025 -16454528 - AluSx SINE Alu -26 286 1 198 182 0 0 chr17 73050025 73050058 -16454495 - MER5B DNA MER1_type -128 50 18 2404 96 0 0 chr17 73050636 73050937 -16453616 - AluSc SINE Alu -8 301 1 2459 57 3 3 chr17 73051411 73051708 -16452845 - AluY SINE Alu -14 297 1 1979 153 7 0 chr17 73051850 73052150 -16452403 - AluJo SINE Alu -9 303 2 2315 110 10 0 chr17 73052513 73052821 -16451732 - AluSx SINE Alu -1 311 1 1804 144 43 0 chr17 73053019 73053296 -16451257 - AluJb SINE Alu -23 289 1 923 107 0 0 chr17 73053338 73053459 -16451094 + AluSp/q SINE Alu 182 302 -11 1468 184 37 46 chr17 73053935 73054396 -16450157 - MLT2B3 LTR ERVL 0 554 1 1876 141 7 23 chr17 73054438 73054743 -16449810 + AluJo SINE Alu 1 300 -12 1507 126 156 15 chr17 73054743 73055013 -16449540 + AluSg1 SINE Alu 1 308 -1 2407 61 7 0 chr17 73055682 73055977 -16448576 + AluY SINE Alu 7 303 -8 1779 136 6 62 chr17 73056628 73056951 -16447602 + AluJb SINE Alu 1 305 -7 841 180 7 0 chr17 73056969 73057108 -16447445 - FRAM SINE Alu -26 150 11 2179 137 3 0 chr17 73057120 73057419 -16447134 - AluJb SINE Alu -12 300 1 1074 154 36 122 chr17 73057685 73057813 -16446740 - L1MB7 LINE L1 -16 6168 6031 2239 95 0 11 chr17 73057813 73058096 -16446457 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr17 73058098 73058124 -16446429 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1074 154 36 122 chr17 73058124 73058317 -16446236 - L1MB7 LINE L1 -154 6030 5822 3645 182 19 41 chr17 73058317 73058377 -16446176 - L1MB3 LINE L1 0 6183 6123 1945 135 7 10 chr17 73058377 73058666 -16445887 - AluJb SINE Alu -22 290 3 3645 182 19 41 chr17 73058666 73058835 -16445718 - L1MB3 LINE L1 -60 6123 5952 2301 103 0 7 chr17 73058835 73059137 -16445416 - AluSg SINE Alu -10 300 1 3645 182 19 41 chr17 73059137 73059690 -16444863 - L1MB3 LINE L1 -231 5952 5417 1074 154 36 122 chr17 73059690 73059701 -16444852 - L1MB7 LINE L1 -361 5823 5861 2001 125 32 0 chr17 73059729 73060010 -16444543 + AluSq SINE Alu 1 290 -23 2400 93 0 0 chr17 73060065 73060366 -16444187 + AluSx SINE Alu 1 301 -11 2213 128 3 0 chr17 73060513 73060819 -16443734 + AluSx SINE Alu 1 307 -5 875 141 0 8 chr17 73060825 73060953 -16443600 + FLAM_C SINE Alu 1 127 -16 23 33 0 0 chr17 73060954 73060984 -16443569 + AT_rich Low_complexity Low_complexity 1 30 0 387 269 0 94 chr17 73061021 73061113 -16443440 - MIR SINE MIR -18 244 172 2482 50 3 7 chr17 73061113 73061411 -16443142 - AluY SINE Alu -14 297 1 387 269 0 94 chr17 73061411 73061478 -16443075 - MIR SINE MIR -90 172 100 207 139 0 0 chr17 73061480 73061516 -16443037 + (TA)n Simple_repeat Simple_repeat 2 37 0 547 247 51 45 chr17 73061665 73061815 -16442738 - MIR SINE MIR -7 255 102 2136 133 0 0 chr17 73061815 73062101 -16442452 + AluSx SINE Alu 1 286 -26 547 247 51 45 chr17 73062101 73062128 -16442425 - MIR SINE MIR -160 102 77 393 302 23 16 chr17 73062166 73062295 -16442258 + L2 LINE L2 2945 3074 -239 281 182 0 0 chr17 73062310 73062354 -16442199 + L2 LINE L2 3268 3311 -2 1239 124 11 0 chr17 73062581 73062758 -16441795 - AluSg/x SINE Alu 0 310 132 2473 85 0 0 chr17 73062758 73063065 -16441488 - AluSg SINE Alu -3 307 1 189 0 0 0 chr17 73063065 73063086 -16441467 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2311 92 0 0 chr17 73063086 73063368 -16441185 - AluSx SINE Alu -30 282 1 537 284 80 23 chr17 73063695 73063871 -16440682 + MIR SINE MIR 49 234 -28 2196 99 36 7 chr17 73063912 73064215 -16440338 - AluSq SINE Alu -1 312 1 1734 180 0 30 chr17 73064220 73064525 -16440028 - AluJo SINE Alu -16 296 1 1909 161 30 3 chr17 73064618 73064917 -16439636 - AluSx SINE Alu -5 307 1 683 180 0 0 chr17 73065294 73065405 -16439148 + MER81 DNA DNA 3 113 -1 198 0 0 0 chr17 73065610 73065632 -16438921 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 183 291 78 19 chr17 73065673 73065776 -16438777 - L2 LINE L2 -1055 2259 2151 1916 163 7 0 chr17 73065837 73066138 -16438415 + AluJb SINE Alu 1 303 -9 1092 67 0 8 chr17 73066143 73066277 -16438276 + AluSq/x SINE Alu 14 146 -166 2257 104 0 10 chr17 73066277 73066584 -16437969 + AluY SINE Alu 1 304 -7 2019 143 0 7 chr17 73066856 73067156 -16437397 + AluSx SINE Alu 1 298 -14 2064 160 0 3 chr17 73067256 73067569 -16436984 - AluJb SINE Alu 0 312 1 285 237 54 21 chr17 73067662 73067755 -16436798 - MIR3 SINE MIR -2 206 111 399 41 0 0 chr17 73068023 73068072 -16436481 + (TG)n Simple_repeat Simple_repeat 1 49 0 2227 114 0 3 chr17 73068100 73068398 -16436155 + AluSx SINE Alu 1 297 -15 207 0 0 0 chr17 73068398 73068421 -16436132 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2604 56 13 0 chr17 73068644 73068949 -16435604 - AluSp SINE Alu -4 309 1 808 176 11 74 chr17 73069118 73069258 -16435295 + FRAM SINE Alu 2 130 -172 2302 89 0 35 chr17 73069258 73069574 -16434979 - AluSg SINE Alu -5 305 1 808 176 11 74 chr17 73069574 73069609 -16434944 + FRAM SINE Alu 130 166 0 231 337 12 23 chr17 73069913 73069999 -16434554 - MIR3 SINE MIR -49 159 75 1018 188 0 17 chr17 73070140 73070316 -16434237 - FRAM SINE Alu -3 173 1 426 215 44 22 chr17 73070534 73070669 -16433884 + LTR67 LTR ERVL 332 469 -88 2354 107 0 0 chr17 73070717 73071015 -16433538 + AluSx SINE Alu 1 298 -14 2321 116 0 10 chr17 73071037 73071348 -16433205 + AluSg SINE Alu 2 309 -1 180 311 14 27 chr17 73071358 73071432 -16433121 - L2 LINE L2 -3237 77 5 1032 78 0 0 chr17 73071621 73071750 -16432803 + AluSp/q SINE Alu 173 301 -12 2226 117 40 0 chr17 73071835 73072134 -16432419 + AluSx SINE Alu 1 311 -1 632 314 40 42 chr17 73072138 73072492 -16432061 + ERVL LTR ERVL 3035 3387 -2377 2019 136 3 13 chr17 73072584 73072886 -16431667 + AluSx SINE Alu 1 299 -13 726 126 90 9 chr17 73073026 73073137 -16431416 - FLAM_C SINE Alu -12 121 2 2121 130 20 0 chr17 73073213 73073513 -16431040 - AluSx SINE Alu -6 306 1 291 163 0 0 chr17 73073545 73073594 -16430959 - Alu SINE Alu -11 291 243 1884 178 0 10 chr17 73073661 73073970 -16430583 + AluJb SINE Alu 3 308 -4 2410 100 0 0 chr17 73074009 73074310 -16430243 - AluSx SINE Alu -9 303 3 1911 128 43 0 chr17 73074515 73074797 -16429756 - AluSq SINE Alu -19 294 1 455 154 26 0 chr17 73074826 73074904 -16429649 + AluJ/FLAM SINE Alu 2 81 -231 2001 134 17 0 chr17 73074987 73075278 -16429275 - AluSx SINE Alu -16 296 1 283 316 11 11 chr17 73075279 73075374 -16429179 + MER102b DNA MER1_type 229 323 -18 2227 78 3 69 chr17 73075528 73075847 -16428706 - AluSg SINE Alu -11 299 2 1842 158 3 3 chr17 73075864 73076148 -16428405 - AluJb SINE Alu -28 284 1 21 36 0 0 chr17 73077320 73077348 -16427205 + GC_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr17 73077667 73077693 -16426860 + GC_rich Low_complexity Low_complexity 1 26 0 219 143 0 54 chr17 73077707 73077763 -16426790 + (CGGGGG)n Simple_repeat Simple_repeat 4 56 0 206 113 0 57 chr17 73077826 73077879 -16426674 + (GGA)n Simple_repeat Simple_repeat 2 51 0 2352 94 0 0 chr17 73079638 73079937 -16424616 - AluSg SINE Alu -11 299 1 2284 107 3 0 chr17 73080235 73080535 -16424018 - AluSp SINE Alu -12 301 1 270 320 117 0 chr17 73080591 73080694 -16423859 + L2 LINE L2 3154 3268 -4 208 104 42 42 chr17 73080804 73080852 -16423701 + T-rich Low_complexity Low_complexity 1 48 0 1005 118 0 21 chr17 73081045 73081189 -16423364 - L1PA8A LINE L1 0 6131 5991 206 98 49 0 chr17 73082328 73082369 -16422184 + GA-rich Low_complexity Low_complexity 3 45 0 2291 95 7 0 chr17 73083599 73083895 -16420658 - AluSg SINE Alu -12 298 1 2401 169 53 56 chr17 73084239 73084491 -16420062 - L1MB7 LINE L1 0 6184 5933 2239 96 0 35 chr17 73084491 73084804 -16419749 - AluSg SINE Alu -8 302 1 2401 169 53 56 chr17 73084804 73084953 -16419600 - L1MB7 LINE L1 -251 5933 5785 774 187 0 58 chr17 73084953 73085092 -16419461 - FLAM_A SINE Alu -1 132 2 2401 169 53 56 chr17 73085092 73085258 -16419295 - L1MB7 LINE L1 -399 5785 5618 2178 111 13 0 chr17 73085275 73085573 -16418980 - AluSx SINE Alu -8 304 3 1554 216 63 51 chr17 73085897 73086387 -16418166 - L1MDa LINE L1 -3269 2946 2451 695 135 111 139 chr17 73086574 73086638 -16417915 - MER3 DNA MER1_type 0 209 145 1468 185 17 17 chr17 73086638 73086930 -16417623 + AluJo SINE Alu 1 292 -20 695 135 111 139 chr17 73086930 73087073 -16417480 - MER3 DNA MER1_type -64 145 8 2457 73 3 0 chr17 73087371 73087671 -16416882 - AluY SINE Alu -10 301 1 578 225 42 0 chr17 73088288 73088430 -16416123 + L1M4 LINE L1 2441 2588 -3558 261 172 172 55 chr17 73088893 73089021 -16415532 - L1MC/D LINE L1 -2042 5766 5624 2184 113 0 7 chr17 73089115 73089416 -16415137 - AluSx SINE Alu -13 299 1 361 217 70 26 chr17 73089674 73089753 -16414800 + MIR3 SINE MIR 88 175 -33 1083 189 82 5 chr17 73089753 73089959 -16414594 - MER58A DNA MER1_type 0 224 3 361 217 70 26 chr17 73089959 73089994 -16414559 + MIR3 SINE MIR 175 207 -1 1799 152 14 10 chr17 73090191 73090481 -16414072 - AluSx SINE Alu -20 292 2 407 254 95 98 chr17 73090862 73091251 -16413302 - L1M4 LINE L1 -2001 4145 3758 2114 190 67 60 chr17 73091294 73091811 -16412742 - L1ME1 LINE L1 -297 5869 5346 1742 172 7 17 chr17 73091811 73092113 -16412440 - AluJb SINE Alu -13 299 1 2114 190 67 60 chr17 73092113 73092178 -16412375 - L1ME1 LINE L1 -820 5346 5283 364 135 27 0 chr17 73092192 73092266 -16412287 + CT-rich Low_complexity Low_complexity 1 76 0 1700 155 10 40 chr17 73092266 73092569 -16411984 - AluJb SINE Alu -18 294 1 856 158 6 22 chr17 73092572 73092755 -16411798 - L1ME1 LINE L1 -846 5300 5121 2393 88 0 3 chr17 73092832 73093138 -16411415 + AluSp SINE Alu 1 305 -8 21 57 0 0 chr17 73093145 73093180 -16411373 + AT_rich Low_complexity Low_complexity 1 35 0 815 179 0 0 chr17 73093290 73093407 -16411146 - FLAM_C SINE Alu -25 118 2 635 199 146 43 chr17 73093409 73093855 -16410698 - L1MDa LINE L1 -3937 2278 1887 209 228 13 0 chr17 73093895 73093974 -16410579 + (TA)n Simple_repeat Simple_repeat 1 80 0 734 207 135 64 chr17 73094443 73094824 -16409729 + L1MDa LINE L1 1705 2087 -4339 576 218 0 0 chr17 73094837 73095016 -16409537 + (TA)n Simple_repeat Simple_repeat 1 179 0 308 163 0 0 chr17 73095021 73095070 -16409483 - AluS SINE Alu -19 281 233 904 115 0 0 chr17 73095072 73095194 -16409359 - AluSq/x SINE Alu -172 140 19 211 139 0 23 chr17 73095218 73095261 -16409292 + (TA)n Simple_repeat Simple_repeat 2 43 0 228 253 13 0 chr17 73095265 73095344 -16409209 + L1MC4 LINE L1 6614 6693 -1349 1209 232 91 67 chr17 73095352 73095460 -16409093 - L1MC4 LINE L1 -401 7641 7537 2490 84 3 0 chr17 73095460 73095770 -16408783 - AluSq SINE Alu -2 311 1 1967 128 0 78 chr17 73095776 73095956 -16408597 - AluSx SINE Alu -3 309 165 2479 54 3 0 chr17 73095956 73096251 -16408302 - AluY SINE Alu -15 296 1 1967 128 0 78 chr17 73096251 73096405 -16408148 - AluSx SINE Alu -147 165 1 1209 232 91 67 chr17 73096405 73096445 -16408108 - L1MC4 LINE L1 -509 7533 7495 2354 99 3 0 chr17 73096445 73096747 -16407806 - AluSp SINE Alu -10 303 1 1209 232 91 67 chr17 73096747 73097129 -16407424 - L1MC4 LINE L1 -547 7495 7090 1811 150 11 3 chr17 73097195 73097481 -16407072 + AluJo SINE Alu 1 288 -24 227 161 36 0 chr17 73097481 73097537 -16407016 + (TA)n Simple_repeat Simple_repeat 1 58 0 662 178 0 0 chr17 73097913 73098014 -16406539 + AluJ/FLAM SINE Alu 2 102 -210 596 143 19 38 chr17 73098108 73098213 -16406340 + MER3 DNA MER1_type 1 103 -106 1861 160 14 0 chr17 73098411 73098705 -16405848 - AluSx SINE Alu -14 298 1 568 218 82 36 chr17 73098742 73098933 -16405620 + MIR SINE MIR 44 242 -20 2267 92 3 0 chr17 73098937 73099232 -16405321 + AluSx SINE Alu 1 296 -16 1314 97 11 0 chr17 73099232 73099407 -16405146 + AluY SINE Alu 133 309 -2 22 0 0 0 chr17 73100289 73100311 -16404242 + AT_rich Low_complexity Low_complexity 1 22 0 388 284 121 7 chr17 73100842 73100983 -16403570 - MER5A DNA MER1_type -1 188 32 313 230 230 0 chr17 73101002 73101102 -16403451 - MER5A DNA MER1_type -6 183 61 379 136 76 102 chr17 73101295 73101360 -16403193 + MER5A DNA MER1_type 3 68 -121 2169 111 0 10 chr17 73101360 73101658 -16402895 + AluSx SINE Alu 1 295 -17 379 136 76 102 chr17 73101658 73101730 -16402823 + MER5A DNA MER1_type 68 189 0 250 276 171 9 chr17 73101860 73101965 -16402588 - L2 LINE L2 -4 3309 3188 2093 130 13 0 chr17 73102071 73102371 -16402182 - AluSg SINE Alu -6 304 1 392 276 79 24 chr17 73102377 73102543 -16402010 - L1ME3A LINE L1 -301 5869 5695 4726 72 40 17 chr17 73102559 73103155 -16401398 - LTR66 LTR ERVL 0 610 1 455 184 112 92 chr17 73103197 73103393 -16401160 - MER112 DNA MER1_type -55 205 6 467 295 21 26 chr17 73103438 73103628 -16400925 - L1ME3A LINE L1 -588 5574 5386 24 0 0 0 chr17 73103946 73103970 -16400583 + AT_rich Low_complexity Low_complexity 1 24 0 468 256 148 58 chr17 73104167 73104558 -16399995 - L1MC4a LINE L1 -321 5800 5520 1956 102 4 4 chr17 73104558 73104822 -16399731 + AluSx SINE Alu 1 264 -48 207 0 0 0 chr17 73105300 73105323 -16399230 + (TTA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr17 73105409 73105431 -16399122 + AT_rich Low_complexity Low_complexity 1 22 0 2176 138 0 0 chr17 73106723 73107028 -16397525 + AluSx SINE Alu 1 305 -7 2436 256 145 64 chr17 73107559 73108854 -16395699 - HAL1 LINE L1 -985 1522 334 2487 62 3 19 chr17 73108854 73109163 -16395390 - AluY SINE Alu -5 306 3 1954 142 0 10 chr17 73109171 73109467 -16395086 - AluJb SINE Alu -14 298 6 2436 256 145 64 chr17 73109467 73109480 -16395073 - HAL1 LINE L1 -2179 328 317 2410 87 3 3 chr17 73109480 73109790 -16394763 - AluSg SINE Alu 0 310 1 2436 256 145 64 chr17 73109790 73109850 -16394703 - HAL1 LINE L1 -2190 317 32 968 119 0 0 chr17 73110149 73110283 -16394270 + AluSg/x SINE Alu 173 306 -6 450 212 30 0 chr17 73110727 73110826 -16393727 - MIR SINE MIR -9 253 152 38 0 0 0 chr17 73110826 73110864 -16393689 + AT_rich Low_complexity Low_complexity 1 38 0 1637 186 7 0 chr17 73110865 73111150 -16393403 - AluJo SINE Alu -25 287 1 343 257 0 0 chr17 73111152 73111222 -16393331 - MIR SINE MIR -100 162 93 832 107 8 25 chr17 73112438 73112559 -16391994 - FLAM_C SINE Alu -18 125 7 455 312 188 23 chr17 73112686 73113032 -16391521 + L2 LINE L2 2251 2653 -661 1833 117 89 3 chr17 73113038 73113320 -16391233 - AluSq SINE Alu -7 306 1 2265 108 3 0 chr17 73113675 73113980 -16390573 - AluSx SINE Alu -6 306 1 1014 257 24 16 chr17 73114028 73114277 -16390276 - MIR SINE MIR 0 262 12 628 193 83 143 chr17 73114341 73114619 -16389934 - MLT1D LTR MaLR -2 503 213 661 120 34 8 chr17 73114623 73114740 -16389813 - MLT1C-int LTR MaLR -1249 122 3 1828 173 84 43 chr17 73114746 73114982 -16389571 - MLT1C LTR MaLR -6 461 236 2105 98 16 16 chr17 73114982 73115288 -16389265 - AluSc SINE Alu -3 306 1 1828 173 84 43 chr17 73115288 73115490 -16389063 - MLT1C LTR MaLR -231 236 5 2217 121 0 6 chr17 73115948 73116262 -16388291 + AluSx SINE Alu 1 312 0 1234 129 89 49 chr17 73116410 73116499 -16388054 - MER46A DNA MER2_type -2496 235 151 2147 95 0 7 chr17 73116499 73116810 -16387743 - AluY SINE Alu 0 309 1 1234 129 89 49 chr17 73116810 73116943 -16387610 - MER46A DNA MER2_type -2580 151 3 462 240 90 89 chr17 73117051 73117307 -16387246 - MIR SINE MIR 0 262 2 962 184 0 6 chr17 73117671 73117834 -16386719 + FRAM SINE Alu 1 155 -21 1756 180 104 3 chr17 73118492 73118808 -16385745 - MER7A DNA MER2_type 0 346 1 2825 160 65 7 chr17 73119036 73119574 -16384979 - L1MC3 LINE L1 0 7785 7217 275 274 12 12 chr17 73119596 73119680 -16384873 - MLT1D LTR MaLR -439 128 45 544 128 105 145 chr17 73119683 73119855 -16384698 - L1MC3 LINE L1 -682 7103 6939 861 236 6 6 chr17 73120063 73120241 -16384312 + MER8 DNA MER2_type 2 179 -60 340 222 0 0 chr17 73120216 73120279 -16384274 + MER2 DNA MER2_type 282 344 -1 * 501 196 95 0 chr17 73120620 73120768 -16383785 - MER54B LTR ERVL -631 162 1 1790 148 10 7 chr17 73120806 73121109 -16383444 + AluSx SINE Alu 1 304 -8 2082 106 14 7 chr17 73121249 73121531 -16383022 - AluSg SINE Alu -23 287 4 657 162 88 20 chr17 73121779 73121927 -16382626 - Looper DNA T2_type 0 1558 1401 321 188 152 45 chr17 73121929 73122041 -16382512 + L2 LINE L2 1636 1759 -1555 207 0 0 0 chr17 73122047 73122070 -16382483 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1015 218 16 44 chr17 73122072 73122241 -16382312 - AluJo SINE Alu -29 283 122 1776 124 92 0 chr17 73122241 73122514 -16382039 + AluSx SINE Alu 1 298 -14 1015 218 16 44 chr17 73122514 73122596 -16381957 - AluJo SINE Alu -190 122 39 3075 257 48 18 chr17 73122596 73123140 -16381413 + L2 LINE L2 1752 2333 -981 1758 170 6 25 chr17 73123140 73123458 -16381095 - AluJb SINE Alu 0 312 1 3075 257 48 18 chr17 73123458 73123782 -16380771 + L2 LINE L2 2333 2646 -668 1940 162 0 7 chr17 73123790 73124099 -16380454 - AluSx SINE Alu -5 307 1 1140 132 20 20 chr17 73124152 73124349 -16380204 + HSMAR2 DNA Mariner 2 198 -1104 1119 162 0 0 chr17 73124356 73124523 -16380030 - AluJb SINE Alu -17 295 129 2055 132 0 0 chr17 73124537 73124818 -16379735 - AluSq SINE Alu -32 281 1 3560 77 4 22 chr17 73124819 73125243 -16379310 - L1P5 LINE L1 -367 5784 5369 2473 87 0 0 chr17 73125243 73125552 -16379001 - AluSg SINE Alu -1 309 1 3560 77 4 22 chr17 73125552 73125620 -16378933 - L1P5 LINE L1 -782 5369 5301 2602 86 11 119 chr17 73125620 73125859 -16378694 + HSMAR2 DNA Mariner 778 1041 -261 2238 88 0 72 chr17 73125859 73126190 -16378363 - AluSx SINE Alu -5 307 1 2602 86 11 119 chr17 73126190 73126229 -16378324 + HSMAR2 DNA Mariner 1041 1083 -219 2525 62 0 3 chr17 73126229 73126536 -16378017 - AluY SINE Alu -5 306 1 2602 86 11 119 chr17 73126536 73126569 -16377984 + HSMAR2 DNA Mariner 1083 1118 -184 2086 136 3 0 chr17 73126569 73126864 -16377689 - AluSx SINE Alu -16 296 1 2602 86 11 119 chr17 73126864 73126942 -16377611 + HSMAR2 DNA Mariner 1118 1115 -187 2257 119 0 3 chr17 73126942 73127244 -16377309 + AluSx SINE Alu 2 302 -10 2602 86 11 119 chr17 73127244 73127314 -16377239 + HSMAR2 DNA Mariner 1114 1190 -112 1770 134 8 0 chr17 73127508 73127762 -16376791 - AluSq SINE Alu -57 256 1 882 162 14 54 chr17 73127773 73127995 -16376558 - L1MC/D LINE L1 -2521 5474 5262 * 2137 214 53 2 chr17 73127977 73128487 -16376066 - L1MC/D LINE L1 -1293 4853 4318 2398 88 0 7 chr17 73328794 73329100 -16175453 + AluSx SINE Alu 2 305 -7 1993 116 49 3 chr17 73329408 73329717 -16174836 - AluSx SINE Alu 0 312 2 180 0 0 0 chr17 73329720 73329740 -16174813 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 396 200 0 0 chr17 73329740 73329820 -16174733 + MER63 DNA MER1_type 932 1011 -50 353 330 85 6 chr17 73329834 73330010 -16174543 - MER91A DNA MER1_type -6 190 1 476 229 19 0 chr17 73330041 73330146 -16174407 + MER3 DNA MER1_type 5 111 -98 276 30 0 0 chr17 73330153 73330186 -16174367 + (TG)n Simple_repeat Simple_repeat 2 34 0 2442 87 0 0 chr17 73330367 73330666 -16173887 - AluSx SINE Alu -13 299 1 274 281 97 45 chr17 73331055 73331322 -16173231 - L1MEd LINE L1 -4862 1257 977 1842 99 0 0 chr17 73331424 73331656 -16172897 - AluSq SINE Alu -80 233 2 358 247 170 56 chr17 73331894 73331988 -16172565 - MIR SINE MIR -1 261 179 544 68 96 0 chr17 73331988 73332061 -16172492 - MADE1 DNA Mariner 0 80 1 358 247 170 56 chr17 73332061 73332192 -16172361 - MIR SINE MIR -83 179 7 198 333 22 33 chr17 73332189 73332279 -16172274 + MER5A DNA MER1_type 9 97 -92 * 564 139 0 0 chr17 73332298 73332384 -16172169 + AluJ/FRAM SINE Alu 221 306 -6 27 0 0 0 chr17 73332526 73332553 -16172000 + AT_rich Low_complexity Low_complexity 1 27 0 2018 149 0 7 chr17 73332553 73332848 -16171705 - AluSx SINE Alu -19 293 1 535 103 0 0 chr17 73332848 73332916 -16171637 - AluS SINE Alu -226 87 20 2306 163 68 24 chr17 73333374 73333467 -16171086 + Charlie1b DNA MER1_type 5 92 -2669 2244 115 3 0 chr17 73333467 73333762 -16170791 + AluSg SINE Alu 1 296 -14 2306 163 68 24 chr17 73333762 73334164 -16170389 + Charlie1b DNA MER1_type 92 522 -1 354 238 124 47 chr17 73334296 73334489 -16170064 - L2 LINE L2 -2 3311 3104 214 304 16 16 chr17 73335489 73335614 -16168939 + L2 LINE L2 2196 2320 -994 1112 186 0 42 chr17 73335728 73335943 -16168610 + AluJb SINE Alu 86 291 -21 1562 79 0 33 chr17 73336054 73336268 -16168285 - AluY SINE Alu -104 207 1 2046 93 3 50 chr17 73336504 73336805 -16167748 - AluSx SINE Alu -25 287 1 2099 147 0 0 chr17 73337436 73337748 -16166805 - AluSx SINE Alu 0 312 1 3924 152 32 33 chr17 73337794 73338518 -16166035 - L1MB5 LINE L1 0 6174 5452 295 256 12 12 chr17 73340107 73340189 -16164364 + MER112 DNA MER1_type 2 83 -177 334 240 50 20 chr17 73340215 73340315 -16164238 + MER112 DNA MER1_type 158 260 0 2060 139 7 7 chr17 73340903 73341204 -16163349 - AluSx SINE Alu -11 301 1 2362 127 12 0 chr17 73341720 73342066 -16162487 - MER1A DNA MER1_type -44 485 136 217 312 67 81 chr17 73342387 73342672 -16161881 - L2 LINE L2 -26 3246 2966 460 279 123 0 chr17 73342714 73342893 -16161660 - MIR SINE MIR -14 248 48 21 0 0 0 chr17 73342990 73343011 -16161542 + AT_rich Low_complexity Low_complexity 1 21 0 3379 229 76 39 chr17 73343431 73343677 -16160876 - L1M4 LINE L1 -983 5163 4927 2176 128 0 0 chr17 73343677 73343981 -16160572 + AluSx SINE Alu 1 304 -8 3379 229 76 39 chr17 73343981 73344058 -16160495 - L1M4 LINE L1 -1219 4927 4854 2457 96 3 3 chr17 73344058 73344371 -16160182 + AluSp SINE Alu 1 313 0 3379 229 76 39 chr17 73344371 73345191 -16159362 - L1M4 LINE L1 -1292 4854 3977 2209 120 0 0 chr17 73346424 73346725 -16157828 + AluSq SINE Alu 1 301 -12 2152 96 34 3 chr17 73347487 73347778 -16156775 + AluSc SINE Alu 1 300 -9 339 136 0 0 chr17 73347780 73347839 -16156714 + (GGGA)n Simple_repeat Simple_repeat 3 61 0 261 274 37 55 chr17 73347873 73348037 -16156516 + HAL1 LINE L1 2344 2504 -3 310 250 23 11 chr17 73348068 73348156 -16156397 + L1MEd LINE L1 3 91 -6028 202 172 35 0 chr17 73348272 73348330 -16156223 + (TTATA)n Simple_repeat Simple_repeat 3 62 0 343 245 42 110 chr17 73348492 73348687 -16155866 + L1M4 LINE L1 2785 2963 -3183 2005 126 23 16 chr17 73348687 73348997 -16155556 + AluSx SINE Alu 1 312 0 343 245 42 110 chr17 73348997 73349038 -16155515 + L1M4 LINE L1 2963 3005 -3141 705 244 48 59 chr17 73349186 73349457 -16155096 - L1M4 LINE L1 -2082 4064 3797 1980 100 52 3 chr17 73349543 73349833 -16154720 - AluSc SINE Alu -5 304 1 2259 93 0 0 chr17 73350626 73350932 -16153621 + AluSg SINE Alu 1 306 0 251 170 0 0 chr17 73350994 73351041 -16153512 - MER45R DNA AcHobo -585 996 950 690 179 8 22 chr17 73351053 73351187 -16153366 - AluJo SINE Alu -178 134 3 487 184 28 57 chr17 73351188 73351329 -16153224 - MER45R DNA AcHobo -622 959 823 * 1918 162 56 17 chr17 73351279 73351492 -16153061 + MER45R DNA AcHobo 1123 1326 -255 2116 127 3 0 chr17 73351492 73351783 -16152770 - AluSx SINE Alu -20 292 1 1918 162 56 17 chr17 73351783 73351983 -16152570 + MER45R DNA AcHobo 1326 1552 -29 2009 138 0 3 chr17 73352083 73352365 -16152188 - AluSx SINE Alu -31 281 1 2581 147 26 14 chr17 73352365 73352793 -16151760 - Tigger7 DNA MER2_type -300 433 1 207 279 81 0 chr17 73352805 73352891 -16151662 + MIR SINE MIR 163 255 -7 2356 108 0 0 chr17 73353150 73353456 -16151097 + AluSx SINE Alu 1 306 -6 190 204 20 20 chr17 73354487 73354536 -16150017 - L3b LINE CR1 -5 1578 1530 405 218 26 0 chr17 73354943 73355021 -16149532 + ORSL DNA AcHobo 1 80 -195 2193 115 0 10 chr17 73355023 73355319 -16149234 + AluSq SINE Alu 1 293 -20 1804 109 0 0 chr17 73355714 73355976 -16148577 + AluSq SINE Alu 53 314 0 37005 30 2 0 chr17 73357104 73362248 -16142305 + L1PA3 LINE L1 1004 6155 0 6255 151 25 12 chr17 73362361 73364479 -16140074 + L1PB1 LINE L1 4015 6150 -1 554 203 0 26 chr17 73364484 73364637 -16139916 + L1 LINE L1 2272 2420 -3726 4237 214 28 13 chr17 73364638 73365617 -16138936 + L1 LINE L1 4093 5085 -1061 942 230 184 0 chr17 73365588 73365892 -16138661 + L1M4 LINE L1 3497 3856 -2290 * 288 229 14 0 chr17 73365935 73366005 -16138548 + L1ME2 LINE L1 6071 6141 -23 5480 36 0 0 chr17 73366019 73366662 -16137891 + L1PA5 LINE L1 5511 6153 -1 2119 74 0 26 chr17 73367599 73367870 -16136683 - AluSg SINE Alu -1 309 46 449 300 59 34 chr17 73367873 73368110 -16136443 - MER90 LTR ERV1 -52 562 320 339 246 55 18 chr17 73368318 73368428 -16136125 + MER103 DNA DNA 4 117 -49 565 291 108 30 chr17 73368498 73368896 -16135657 + L2 LINE L2 2872 3300 -13 222 37 0 0 chr17 73368898 73368925 -16135628 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 273 346 19 10 chr17 73371499 73371603 -16132950 + Charlie8 DNA MER1_type 1 105 -2312 924 165 59 99 chr17 73372074 73372197 -16132356 + MER33 DNA MER1_type 12 138 -2447 1895 101 97 0 chr17 73372197 73372465 -16132088 + AluSg SINE Alu 1 294 -16 924 165 59 99 chr17 73372465 73372663 -16131890 + MER33 DNA MER1_type 138 320 -4 317 40 0 80 chr17 73373410 73373460 -16131093 - MADE1 DNA Mariner -34 46 1 265 279 169 19 chr17 73373985 73374139 -16130414 + MIR SINE MIR 66 242 -20 296 136 0 45 chr17 73374680 73374768 -16129785 + (CGGGG)n Simple_repeat Simple_repeat 1 84 0 1518 137 0 0 chr17 73374871 73375083 -16129470 - AluSg SINE Alu -98 212 1 189 283 0 0 chr17 73376240 73376286 -16128267 - MER5B DNA MER1_type -131 47 2 2173 122 23 0 chr17 73376391 73376694 -16127859 + AluSx SINE Alu 1 310 -2 2250 126 0 0 chr17 73377578 73377880 -16126673 - AluSx SINE Alu -10 302 1 2135 116 3 13 chr17 73378712 73379015 -16125538 - AluSx SINE Alu -12 300 1 1855 136 16 38 chr17 73380122 73380330 -16124223 - AluJb SINE Alu -3 309 109 1937 164 132 0 chr17 73380330 73380708 -16123845 - MSTA LTR MaLR 0 428 1 1855 136 16 38 chr17 73380708 73380815 -16123738 - AluJb SINE Alu -203 109 1 274 311 48 10 chr17 73380821 73380924 -16123629 + L2 LINE L2 3164 3270 -2 2277 96 26 3 chr17 73382149 73382452 -16122101 - AluY SINE Alu -1 310 1 1750 148 0 50 chr17 73382495 73382798 -16121755 + AluJo SINE Alu 24 311 -1 1865 153 7 10 chr17 73383681 73383976 -16120577 + AluJb SINE Alu 1 294 -18 193 287 316 7 chr17 73384174 73384310 -16120243 + MER5B DNA MER1_type 1 178 0 2422 84 3 0 chr17 73384950 73385247 -16119306 + AluSx SINE Alu 8 305 -7 266 185 31 0 chr17 73385267 73385332 -16119221 + GA-rich Low_complexity Low_complexity 3 69 0 2194 110 0 7 chr17 73386750 73387074 -16117479 + AluSx SINE Alu 1 322 0 2206 121 0 3 chr17 73387672 73387969 -16116584 - AluSx SINE Alu -4 308 13 453 200 111 30 chr17 73389577 73389712 -16114841 + L1ME4a LINE L1 5963 6108 -13 289 291 115 27 chr17 73390316 73390464 -16114089 - MIR3 SINE MIR -10 198 38 3864 156 47 12 chr17 73390509 73391235 -16113318 - L1MB8 LINE L1 -2 6176 5426 2227 111 3 0 chr17 73391263 73391560 -16112993 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 73392190 73392214 -16112339 + (T)n Simple_repeat Simple_repeat 1 24 0 1850 152 10 13 chr17 73392591 73392894 -16111659 - AluSx SINE Alu -10 302 1 189 0 0 0 chr17 73393129 73393150 -16111403 + (CA)n Simple_repeat Simple_repeat 2 22 0 2231 85 39 0 chr17 73393160 73393443 -16111110 - AluSx SINE Alu -17 295 2 2271 89 3 20 chr17 73394944 73395247 -16109306 - AluSx SINE Alu -14 298 1 201 138 0 0 chr17 73395285 73395314 -16109239 + (CA)n Simple_repeat Simple_repeat 2 30 0 2383 76 43 7 chr17 73396097 73396398 -16108155 + AluSx SINE Alu 1 312 0 333 0 0 0 chr17 73396798 73396835 -16107718 + (A)n Simple_repeat Simple_repeat 1 37 0 648 295 129 0 chr17 73397288 73397512 -16107041 + MIR SINE MIR 9 261 -1 373 80 0 0 chr17 73398059 73398109 -16106444 - Alu SINE Alu -238 70 21 313 245 96 0 chr17 73398109 73398203 -16106350 - MLT1E2 LTR MaLR -53 573 471 362 214 56 22 chr17 73398206 73398295 -16106258 - MLT1E2 LTR MaLR -388 238 147 343 294 0 11 chr17 73399244 73399336 -16105217 - MIR SINE MIR -75 187 97 244 303 118 17 chr17 73399558 73399677 -16104876 - MIR3 SINE MIR -34 174 44 2411 100 0 0 chr17 73400707 73401006 -16103547 + AluSx SINE Alu 1 299 -13 180 200 44 22 chr17 73402012 73402057 -16102496 + L2 LINE L2 3252 3297 -16 2090 123 10 17 chr17 73402065 73402367 -16102186 + AluJb SINE Alu 3 302 -10 1811 143 0 29 chr17 73402410 73402715 -16101838 + AluJb SINE Alu 13 309 0 1997 81 0 0 chr17 73402989 73403237 -16101316 + AluSx SINE Alu 51 298 -14 2116 132 0 7 chr17 73403761 73404057 -16100496 + AluSx SINE Alu 1 294 -18 632 168 0 44 chr17 73404078 73404191 -16100362 + FLAM_A SINE Alu 20 127 -15 2029 121 0 54 chr17 73405075 73405389 -16099164 + AluJo SINE Alu 1 297 -15 2351 103 0 3 chr17 73405700 73406002 -16098551 - AluSx SINE Alu -11 301 1 328 272 48 56 chr17 73406933 73407058 -16097495 + L3b LINE CR1 1278 1401 -182 2159 121 10 10 chr17 73407839 73408145 -16096408 - AluSx SINE Alu -6 306 1 2384 68 0 10 chr17 73408154 73408449 -16096104 - AluSg SINE Alu -18 292 1 233 217 0 0 chr17 73408512 73408558 -16095995 + (CATA)n Simple_repeat Simple_repeat 2 47 0 241 294 229 0 chr17 73409517 73409626 -16094927 + MER5A DNA MER1_type 56 189 0 298 343 10 0 chr17 73409745 73409844 -16094709 - MIR SINE MIR -6 256 157 348 280 0 109 chr17 73410474 73410604 -16093949 - MARNA DNA Mariner -33 553 453 1743 184 7 10 chr17 73410604 73410909 -16093644 - AluJo SINE Alu 0 312 9 348 280 0 109 chr17 73410909 73410989 -16093564 - MARNA DNA Mariner -133 453 366 2130 92 0 59 chr17 73411008 73411311 -16093242 - AluSg SINE Alu -20 290 6 264 289 12 0 chr17 73411457 73411540 -16093013 - MARNA DNA Mariner -376 210 127 304 258 101 0 chr17 73412359 73412448 -16092105 + L1ME LINE L1 530 627 -5443 3595 146 16 65 chr17 73412469 73412565 -16091988 + L1MCa LINE L1 19 118 -6308 2124 109 58 3 chr17 73412565 73412859 -16091694 + AluSg SINE Alu 1 310 0 3595 146 16 65 chr17 73412859 73413489 -16091064 + L1MCa LINE L1 118 710 -5716 * 6193 217 30 13 chr17 73413486 73415972 -16088581 + L1PBa LINE L1 1647 4270 -2592 2502 65 0 3 chr17 73416159 73416466 -16088087 + AluY SINE Alu 1 306 -5 1884 121 0 7 chr17 73416477 73416749 -16087804 + AluSg SINE Alu 39 308 -2 1938 168 7 3 chr17 73417661 73417964 -16086589 + AluJo SINE Alu 1 304 -8 195 355 28 19 chr17 73418180 73418198 -16086355 - MER5A DNA MER1_type -56 133 117 659 237 35 29 chr17 73418198 73418371 -16086182 - MER45A DNA AcHobo -4 174 1 195 355 28 19 chr17 73418371 73418459 -16086094 - MER5A DNA MER1_type -72 117 26 294 247 0 37 chr17 73420496 73420577 -16083976 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 228 289 22 22 chr17 73420577 73420667 -16083886 - L1MC4 LINE L1 -1339 6703 6614 356 297 20 31 chr17 73420683 73420919 -16083634 + (TATATG)n Simple_repeat Simple_repeat 1 238 -429 2245 100 3 0 chr17 73420919 73421201 -16083352 + AluSx SINE Alu 3 288 -24 186 71 0 0 chr17 73421201 73421229 -16083324 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 356 297 20 31 chr17 73421235 73421358 -16083195 + (TATATG)n Simple_repeat Simple_repeat 238 667 0 2221 118 0 25 chr17 73422667 73422981 -16081572 + AluSx SINE Alu 1 306 -6 204 233 0 0 chr17 73423064 73423107 -16081446 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 268 311 5 79 chr17 73423138 73423328 -16081225 - L2 LINE L2 -56 3257 3082 1618 126 5 0 chr17 73423455 73423677 -16080876 - AluSx SINE Alu -89 223 1 393 230 214 24 chr17 73424094 73424220 -16080333 + MIR SINE MIR 2 151 -111 1675 127 0 40 chr17 73424232 73424331 -16080222 - MER44D DNA MER2_type -1883 604 648 1563 188 16 33 chr17 73424331 73424517 -16080036 - AluJo SINE Alu -11 301 120 210 37 0 0 chr17 73424517 73424544 -16080009 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1563 188 16 33 chr17 73424544 73424660 -16079893 - AluJo SINE Alu -192 120 4 1675 127 0 40 chr17 73424660 73424835 -16079718 - MER44D DNA MER2_type -1838 649 469 406 113 0 0 chr17 73424835 73424888 -16079665 + AluS SINE Alu 11 63 -255 367 105 0 18 chr17 73424966 73425023 -16079530 + AluJb SINE Alu 77 132 -170 2118 53 4 0 chr17 73425123 73425368 -16079185 - AluSg SINE Alu -64 246 1 183 307 67 13 chr17 73425368 73425443 -16079110 - L3 LINE CR1 -386 1191 1113 1026 202 14 40 chr17 73425551 73425774 -16078779 + MER20 DNA MER1_type 3 219 0 332 287 0 70 chr17 73425839 73425968 -16078585 + L2 LINE L2 3194 3313 0 1791 190 0 0 chr17 73426584 73426889 -16077664 + AluJo SINE Alu 1 305 -7 366 23 0 0 chr17 73426890 73426933 -16077620 + (TG)n Simple_repeat Simple_repeat 1 43 0 602 88 0 0 chr17 73426945 73427025 -16077528 - MADE1 DNA Mariner 0 80 1 582 103 0 0 chr17 73428420 73428507 -16076046 + (TCCCC)n Simple_repeat Simple_repeat 2 88 0 767 177 8 0 chr17 73428507 73428631 -16075922 - FLAM_C SINE Alu -8 125 1 234 246 0 0 chr17 73428728 73428789 -16075764 + (TCCA)n Simple_repeat Simple_repeat 4 64 0 236 248 344 6 chr17 73429175 73429332 -16075221 + L2 LINE L2 3104 3313 0 189 107 0 0 chr17 73429472 73429500 -16075053 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 815 239 22 86 chr17 73431559 73431768 -16072785 - MIR SINE MIR 0 262 72 2324 81 34 0 chr17 73431768 73432065 -16072488 + AluSg SINE Alu 1 307 -3 815 239 22 86 chr17 73432065 73432123 -16072430 - MIR SINE MIR -190 72 12 544 305 26 7 chr17 73432134 73432288 -16072265 - MER5B DNA MER1_type -2 176 20 480 297 121 18 chr17 73432907 73433072 -16071481 - MER5A DNA MER1_type -6 183 2 206 356 106 8 chr17 73433077 73433209 -16071344 + MIR SINE MIR 13 157 -105 1326 150 9 4 chr17 73433209 73433442 -16071111 - Tigger2a DNA MER2_type 0 444 211 1459 166 51 58 chr17 73433444 73433564 -16070989 + AluJo SINE Alu 1 120 -192 207 0 0 0 chr17 73433564 73433587 -16070966 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1459 166 51 58 chr17 73433587 73433779 -16070774 + AluJo SINE Alu 120 311 -1 325 39 39 0 chr17 73433782 73433833 -16070720 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 1224 128 0 75 chr17 73433834 73434060 -16070493 - Tigger2a DNA MER2_type -225 209 1 1486 139 3 112 chr17 73434435 73434774 -16069779 + AluJo SINE Alu 1 302 -10 1498 110 0 10 chr17 73436900 73437100 -16067453 + AluSg/x SINE Alu 98 295 -15 30 0 0 0 chr17 73437332 73437362 -16067191 + AT_rich Low_complexity Low_complexity 1 30 0 2089 134 0 45 chr17 73437372 73437685 -16066868 + AluJo SINE Alu 1 299 -13 951 154 0 7 chr17 73437691 73437840 -16066713 + FRAM SINE Alu 4 151 -15 189 0 0 0 chr17 73437841 73437862 -16066691 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 795 173 7 7 chr17 73437863 73438013 -16066540 + L1MB5 LINE L1 6022 6171 -3 224 294 15 0 chr17 73438015 73438083 -16066470 + L2 LINE L2 2712 2780 -534 755 205 46 0 chr17 73438308 73438459 -16066094 + MER3 DNA MER1_type 52 209 0 891 229 22 0 chr17 73438469 73438652 -16065901 - MER5A DNA MER1_type -2 187 1 463 298 155 0 chr17 73438721 73438882 -16065671 + MER5A DNA MER1_type 3 188 -1 329 255 117 0 chr17 73438885 73438979 -16065574 + L2 LINE L2 3191 3295 -18 2258 116 13 10 chr17 73439082 73439393 -16065160 - AluSx SINE Alu 0 312 1 2658 52 0 0 chr17 73439780 73440087 -16064466 - AluY SINE Alu -4 307 1 202 292 157 11 chr17 73440244 73440333 -16064220 - MIR SINE MIR -76 132 31 2315 100 3 10 chr17 73440434 73440743 -16063810 + AluSq SINE Alu 1 307 -6 2435 84 0 63 chr17 73440750 73441083 -16063470 + AluSx SINE Alu 1 312 0 2169 122 124 5 chr17 73441253 73441623 -16062930 + MSTA LTR MaLR 1 414 -14 220 155 17 17 chr17 73441674 73441732 -16062821 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 808 262 86 35 chr17 73441961 73442392 -16062161 - L1ME4a LINE L1 -98 6023 5571 324 251 72 90 chr17 73442555 73442623 -16061930 + MIR SINE MIR 57 125 -137 2418 43 27 13 chr17 73442623 73442923 -16061630 - AluY SINE Alu -7 304 1 324 251 72 90 chr17 73442923 73443021 -16061532 + MIR SINE MIR 125 220 -42 1993 125 4 0 chr17 73443648 73443927 -16060626 + AluSx SINE Alu 1 280 -32 182 33 67 0 chr17 73443927 73443957 -16060596 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 202 226 38 0 chr17 73444068 73444121 -16060432 + CT-rich Low_complexity Low_complexity 4 58 0 467 245 122 14 chr17 73444171 73444318 -16060235 - MIR SINE MIR -9 253 91 2214 98 0 17 chr17 73444410 73444697 -16059856 - AluSx SINE Alu -18 294 13 280 257 43 0 chr17 73445686 73445756 -16058797 - MIR SINE MIR -114 148 76 2102 130 3 0 chr17 73445874 73446173 -16058380 - AluSq SINE Alu -13 300 1 636 218 9 118 chr17 73446810 73446899 -16057654 - MER3 DNA MER1_type -1 208 111 1609 173 21 12 chr17 73446899 73447229 -16057324 + L1MB3 LINE L1 5834 6166 -17 636 218 9 118 chr17 73447229 73447255 -16057298 - MER3 DNA MER1_type -98 111 84 276 30 0 0 chr17 73447255 73447288 -16057265 + (CA)n Simple_repeat Simple_repeat 2 34 0 636 218 9 118 chr17 73447288 73447400 -16057153 - MER3 DNA MER1_type -125 84 5 412 330 85 6 chr17 73447431 73447607 -16056946 + MER91A DNA MER1_type 1 190 -6 1322 221 26 32 chr17 73447621 73447701 -16056852 - MER63 DNA MER1_type -50 1012 933 180 0 0 0 chr17 73447701 73447721 -16056832 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2130 118 7 7 chr17 73447724 73448029 -16056524 + AluSx SINE Alu 2 306 -6 1322 221 26 32 chr17 73448029 73448288 -16056265 - MER63 DNA MER1_type -131 931 671 393 288 163 20 chr17 73448435 73448588 -16055965 + MIR SINE MIR 1 175 -87 2413 97 0 7 chr17 73448624 73448934 -16055619 - AluSx SINE Alu -4 308 1 249 277 62 67 chr17 73449216 73449316 -16055237 + L1ME4a LINE L1 5914 6014 -107 2019 96 52 4 chr17 73449316 73449611 -16054942 + AluSx SINE Alu 16 312 0 249 277 62 67 chr17 73449611 73449705 -16054848 + L1ME4a LINE L1 6014 6107 -14 2527 87 3 0 chr17 73450195 73450507 -16054046 + AluSp SINE Alu 1 313 0 234 336 136 0 chr17 73450886 73450996 -16053557 + L2 LINE L2 3129 3253 -19 204 40 0 0 chr17 73450999 73451024 -16053529 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 278 279 179 7 chr17 73451024 73451164 -16053389 - L2 LINE L2 -15 3298 3135 1053 135 145 5 chr17 73451186 73451386 -16053167 + MER46A DNA MER2_type 9 236 0 289 202 36 24 chr17 73451905 73451989 -16052564 - MLT1A2 LTR MaLR 0 365 281 193 28 0 56 chr17 73452000 73452036 -16052517 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2145 104 17 10 chr17 73452041 73452330 -16052223 - AluSq SINE Alu -22 291 1 207 0 0 0 chr17 73452371 73452394 -16052159 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 837 157 0 30 chr17 73452396 73452530 -16052023 - FLAM_C SINE Alu -13 130 1 860 193 106 51 chr17 73452530 73452784 -16051769 - MLT1A2 LTR MaLR -65 309 42 2372 99 0 0 chr17 73452837 73453140 -16051413 + AluSq SINE Alu 1 303 -10 247 170 57 19 chr17 73453403 73453456 -16051097 + L1M1 LINE L1 928 982 -6583 2532 56 0 40 chr17 73454731 73454771 -16049782 - AluY SINE Alu 0 311 271 213 39 0 0 chr17 73454771 73454797 -16049756 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2532 56 0 40 chr17 73454797 73455080 -16049473 - AluY SINE Alu -40 271 1 1205 197 13 92 chr17 73455091 73455262 -16049291 - AluJo SINE Alu -22 290 154 2273 113 0 0 chr17 73455262 73455555 -16048998 - AluSx SINE Alu -19 293 1 1205 197 13 92 chr17 73455555 73455698 -16048855 - AluJo SINE Alu -158 154 1 1929 169 3 6 chr17 73455727 73456040 -16048513 - AluJb SINE Alu 0 312 1 650 283 11 16 chr17 73456053 73456240 -16048313 + Charlie8 DNA MER1_type 80 265 -2152 1590 237 100 7 chr17 73456327 73456787 -16047766 + MLT1D LTR MaLR 3 505 0 254 311 23 76 chr17 73457512 73457644 -16046909 - MIR SINE MIR -69 193 69 2267 128 0 0 chr17 73457780 73458085 -16046468 + AluSx SINE Alu 1 305 -7 661 116 0 0 chr17 73458221 73458307 -16046246 + AluS SINE Alu 2 87 -225 2230 107 14 0 chr17 73458307 73458598 -16045955 + AluSq SINE Alu 1 295 -18 233 300 73 9 chr17 73458688 73458798 -16045755 + MIR SINE MIR 86 202 -60 1030 145 116 0 chr17 73459075 73459247 -16045306 - AluJo SINE Alu -7 305 114 27 0 0 0 chr17 73459794 73459821 -16044732 + AT_rich Low_complexity Low_complexity 1 27 0 2394 67 0 0 chr17 73460171 73460482 -16044071 - AluY SINE Alu 0 311 1 2194 115 7 0 chr17 73461089 73461384 -16043169 - AluSx SINE Alu -15 297 1 915 213 18 62 chr17 73461522 73461667 -16042886 - MER58A DNA MER1_type -2205 215 82 2017 137 33 7 chr17 73461667 73461966 -16042587 - AluSx SINE Alu -5 307 1 915 213 18 62 chr17 73461966 73462045 -16042508 - MER58A DNA MER1_type -2338 82 1 1115 110 0 0 chr17 73462256 73462402 -16042151 + AluSg/x SINE Alu 127 272 -38 222 235 20 0 chr17 73462679 73462730 -16041823 - MIR3 SINE MIR -48 160 109 247 322 11 0 chr17 73464678 73464768 -16039785 + L1MC4 LINE L1 7935 8025 -17 2153 123 0 0 chr17 73464821 73465106 -16039447 + AluSx SINE Alu 12 296 -16 807 118 0 8 chr17 73465661 73465780 -16038773 - AluJo SINE Alu -178 134 17 198 229 0 0 chr17 73466469 73466504 -16038049 + L2 LINE L2 3217 3251 -21 247 289 13 0 chr17 73466550 73466626 -16037927 + MLT1L LTR MaLR 1 77 -538 480 259 66 78 chr17 73466703 73467088 -16037465 + MLT1L LTR MaLR 126 615 0 2211 105 0 3 chr17 73467528 73467845 -16036708 + AluSx SINE Alu 1 312 0 1507 231 18 26 chr17 73467940 73468325 -16036228 - MER82 DNA MER2_type -3 650 269 2260 106 0 20 chr17 73468325 73468626 -16035927 + AluSx SINE Alu 1 295 -17 231 114 0 0 chr17 73468629 73468664 -16035889 + (TA)n Simple_repeat Simple_repeat 2 36 0 820 235 0 30 chr17 73468664 73468864 -16035689 - MER82 DNA MER2_type -459 194 1 2175 130 0 0 chr17 73468865 73469166 -16035387 + AluSx SINE Alu 1 301 -11 632 257 117 53 chr17 73469513 73470399 -16034154 + L1MC5 LINE L1 5972 6935 -1026 2098 137 0 3 chr17 73470399 73470705 -16033848 + AluSx SINE Alu 1 305 -7 632 257 117 53 chr17 73470705 73470972 -16033581 + L1MC5 LINE L1 6935 7184 -777 673 274 65 41 chr17 73471112 73471646 -16032907 + L1MC5 LINE L1 7252 7714 -247 1308 86 0 48 chr17 73471658 73471844 -16032709 - AluSg/x SINE Alu -1 311 135 246 266 119 37 chr17 73472026 73472135 -16032418 - L2 LINE L2 -1 3271 3154 566 198 77 101 chr17 73472221 73472428 -16032125 - MIR SINE MIR -52 210 9 248 155 0 17 chr17 73472742 73472800 -16031753 + (CA)n Simple_repeat Simple_repeat 2 58 0 2218 86 7 0 chr17 73473068 73473348 -16031205 + AluSp SINE Alu 1 282 -31 207 0 0 0 chr17 73473356 73473379 -16031174 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 519 367 106 14 chr17 73473445 73474083 -16030470 + L2 LINE L2 1987 2694 -620 2029 162 0 10 chr17 73474083 73474414 -16030139 - AluSx SINE Alu 0 312 1 519 367 106 14 chr17 73474414 73474465 -16030088 + L2 LINE L2 2694 2739 -575 2040 143 0 10 chr17 73474475 73474789 -16029764 + AluSx SINE Alu 1 311 -1 284 122 0 0 chr17 73474789 73474830 -16029723 + Alu SINE Alu 1 41 -259 2431 62 0 3 chr17 73474931 73475220 -16029333 - AluY SINE Alu -13 298 11 1696 136 0 8 chr17 73475262 73475512 -16029041 + AluJo SINE Alu 60 307 -5 1479 259 67 16 chr17 73475512 73476022 -16028531 + MLT1H1 LTR MaLR 18 553 -2 2398 66 3 3 chr17 73476815 73477156 -16027397 - AluSq SINE Alu 0 341 1 2275 85 0 39 chr17 73477167 73477473 -16027080 - AluY SINE Alu -17 294 1 328 239 0 0 chr17 73477487 73477558 -16026995 - MIR SINE MIR -4 258 188 5838 101 82 92 chr17 73477709 73478836 -16025717 + MER11C LTR ERVK 1 1071 0 1828 139 3 54 chr17 73478840 73478960 -16025593 + AluSx SINE Alu 1 126 -186 2182 88 22 0 chr17 73478960 73479324 -16025229 + AluY SINE Alu 3 372 0 1828 139 3 54 chr17 73479324 73479497 -16025056 + AluSx SINE Alu 126 280 -32 191 81 54 0 chr17 73479525 73479562 -16024991 + A-rich Low_complexity Low_complexity 2 40 0 484 219 109 8 chr17 73479566 73479694 -16024859 - MER45A DNA AcHobo -36 142 2 596 283 71 29 chr17 73479852 73480092 -16024461 + L2 LINE L2 2363 2612 -702 2341 118 0 0 chr17 73480269 73480573 -16023980 - AluSx SINE Alu -7 305 2 1238 77 87 0 chr17 73480606 73480789 -16023764 - MER30 DNA MER1_type -31 199 1 229 321 60 0 chr17 73480792 73480876 -16023677 + L2 LINE L2 2722 2810 -504 466 306 131 31 chr17 73481206 73481565 -16022988 + L2 LINE L2 2847 3241 -72 567 244 142 47 chr17 73482009 73482236 -16022317 + MIR SINE MIR 3 244 -18 1603 199 55 75 chr17 73482751 73483228 -16021325 + MLT1C LTR MaLR 1 467 0 397 273 148 63 chr17 73483727 73483808 -16020745 + L2 LINE L2 2809 2882 -431 2187 126 7 0 chr17 73483808 73484117 -16020436 - AluSq SINE Alu -2 311 1 397 273 148 63 chr17 73484117 73484434 -16020119 + L2 LINE L2 2882 3241 -72 312 191 29 0 chr17 73484863 73484931 -16019622 + MLT1K LTR MaLR 519 588 0 3824 113 17 4 chr17 73484939 73485459 -16019094 - MER1A DNA MER1_type 0 527 1 322 382 57 24 chr17 73485473 73485685 -16018868 - L2 LINE L2 -65 3207 2989 456 292 99 6 chr17 73485693 73485864 -16018689 - MIR SINE MIR -1 261 75 235 288 14 14 chr17 73485931 73486004 -16018549 - MIR SINE MIR -178 84 12 2387 93 10 0 chr17 73486410 73486711 -16017842 - AluSq SINE Alu -9 304 1 696 213 0 30 chr17 73486783 73486947 -16017606 + MLT1A2 LTR MaLR 3 161 -213 754 203 0 0 chr17 73486953 73487076 -16017477 + FLAM_C SINE Alu 2 124 -19 304 290 40 0 chr17 73487221 73487321 -16017232 + MIR SINE MIR 98 201 -61 180 0 0 0 chr17 73487445 73487465 -16017088 + (GA)n Simple_repeat Simple_repeat 2 21 0 325 102 34 0 chr17 73487476 73487535 -16017018 - AluJo SINE Alu -166 136 76 851 202 22 6 chr17 73487542 73487720 -16016833 + MLT1A2 LTR MaLR 190 370 -4 2395 76 33 7 chr17 73487854 73488155 -16016398 - AluSc SINE Alu 0 309 1 942 142 13 26 chr17 73489291 73489446 -16015107 - FAM SINE Alu 0 49 1 188 227 258 0 chr17 73489649 73489715 -16014838 + L2 LINE L2 2538 2620 -694 293 262 0 36 chr17 73489929 73490013 -16014540 + L2 LINE L2 3188 3268 -45 2127 117 3 13 chr17 73490198 73490497 -16014056 - AluSx SINE Alu -16 296 1 2453 87 0 0 chr17 73492385 73492685 -16011868 - AluSq SINE Alu -13 300 1 738 288 73 7 chr17 73493732 73493969 -16010584 - MIR SINE MIR -1 261 22 1114 294 88 9 chr17 73494011 73494466 -16010087 - L2 LINE L2 -12 3301 2811 2062 119 8 0 chr17 73494594 73494862 -16009691 + AluSx SINE Alu 24 293 -19 1858 141 58 4 chr17 73494965 73495242 -16009311 - AluJo SINE Alu -20 292 1 384 301 259 0 chr17 73495327 73495520 -16009033 + MIR SINE MIR 20 262 0 953 178 49 0 chr17 73495779 73495942 -16008611 - FRAM SINE Alu -6 170 1 2381 100 3 0 chr17 73495956 73496257 -16008296 - AluSx SINE Alu -10 302 1 706 234 57 11 chr17 73496260 73496435 -16008118 - MIR SINE MIR -65 197 15 2341 95 7 0 chr17 73496523 73496818 -16007735 + AluSq SINE Alu 1 297 -16 1288 224 111 35 chr17 73496859 73497213 -16007340 + MLT1C LTR MaLR 11 404 -63 2536 78 0 0 chr17 73497213 73497522 -16007031 - AluY SINE Alu -2 309 1 1288 224 111 35 chr17 73497522 73497592 -16006961 + MLT1C LTR MaLR 404 467 0 388 321 18 0 chr17 73498208 73498317 -16006236 - L2 LINE L2 0 3313 3203 1873 176 68 23 chr17 73498336 73498402 -16006151 - MLT1C LTR MaLR 0 467 405 2268 107 10 0 chr17 73498402 73498701 -16005852 + AluSx SINE Alu 1 302 -10 1873 176 68 23 chr17 73498701 73499076 -16005477 - MLT1C LTR MaLR -62 405 6 1316 161 177 12 chr17 73499329 73499583 -16004970 - AluSc SINE Alu -3 296 1 1987 111 71 24 chr17 73500242 73500539 -16004014 + AluSp SINE Alu 1 311 -2 743 131 0 46 chr17 73500597 73500613 -16003940 - AluJo SINE Alu -1 311 296 2220 118 20 0 chr17 73500613 73500919 -16003634 - AluSq SINE Alu -1 312 1 743 131 0 46 chr17 73500919 73501032 -16003521 - AluJo SINE Alu -16 296 188 3750 138 86 27 chr17 73501032 73501861 -16002692 + pTR5 LTR ERV1 6 277 -437 341 214 31 20 chr17 73501861 73501959 -16002594 + LTR30 LTR ERV1 544 642 -80 2325 101 3 0 chr17 73501959 73502285 -16002268 + pTR5 LTR ERV1 66 392 -2046 1064 210 0 10 chr17 73502285 73502480 -16002073 - AluJo SINE Alu -119 193 1 342 277 24 0 chr17 73502498 73502581 -16001972 + L2 LINE L2 3138 3222 -50 193 245 75 0 chr17 73503674 73503727 -16000826 + MIR SINE MIR 101 157 -105 370 239 23 0 chr17 73503733 73503821 -16000732 - MIR3 SINE MIR -5 203 114 689 225 8 0 chr17 73503971 73504091 -16000462 - FLAM_A SINE Alu -12 121 1 2139 88 3 36 chr17 73504096 73504201 -16000352 - AluSx SINE Alu -17 295 188 2374 106 3 0 chr17 73504201 73504512 -16000041 + AluSp SINE Alu 2 313 0 2139 88 3 36 chr17 73504512 73504711 -15999842 - AluSx SINE Alu -124 188 1 308 309 45 9 chr17 73504746 73504856 -15999697 + L1MC4 LINE L1 7928 8041 -1 406 223 53 0 chr17 73505020 73505114 -15999439 - MER5A DNA MER1_type -87 102 4 22 35 0 0 chr17 73505338 73505367 -15999186 + AT_rich Low_complexity Low_complexity 1 29 0 1587 173 0 0 chr17 73505373 73505610 -15998943 - AluJo SINE Alu -75 237 1 701 205 0 0 chr17 73505673 73505790 -15998763 + FLAM_C SINE Alu 2 118 -25 2389 105 0 3 chr17 73506752 73507057 -15997496 + AluSx SINE Alu 1 304 -8 1744 179 7 7 chr17 73507077 73507368 -15997185 + AluJo SINE Alu 1 291 -21 561 279 219 29 chr17 73508367 73508955 -15995598 - L2 LINE L2 -2 3311 2602 363 279 52 22 chr17 73508963 73509099 -15995454 - MER96 DNA MER1_type? -1 174 35 2360 46 0 0 chr17 73509369 73509631 -15994922 - AluY SINE Alu -15 296 35 1112 234 78 63 chr17 73510096 73510256 -15994297 - L1MC5 LINE L1 -44 7917 7761 1803 159 0 23 chr17 73510256 73510564 -15993989 + AluJo SINE Alu 1 301 -11 1112 234 78 63 chr17 73510564 73511019 -15993534 - L1MC5 LINE L1 -200 7761 7293 2518 82 0 0 chr17 73511097 73511401 -15993152 + AluSx SINE Alu 1 304 -8 1363 165 101 38 chr17 73511544 73511877 -15992676 + MLT1A2 LTR MaLR 4 334 -40 2056 145 30 3 chr17 73511877 73512181 -15992372 - AluSx SINE Alu 0 312 1 1363 165 101 38 chr17 73512181 73512225 -15992328 + MLT1A2 LTR MaLR 334 374 0 378 200 2 51 chr17 73512409 73512499 -15992054 + MIR SINE MIR 72 159 -49 22 43 0 21 chr17 73512717 73512735 -15991818 + AT_rich Low_complexity Low_complexity 1 18 -28 863 146 0 0 chr17 73512735 73512865 -15991688 + FLAM_C SINE Alu 1 130 -3 22 43 0 21 chr17 73512865 73512893 -15991660 + AT_rich Low_complexity Low_complexity 18 46 0 282 287 148 20 chr17 73513411 73513512 -15991041 + L2 LINE L2 3200 3313 0 225 125 18 54 chr17 73513818 73513874 -15990679 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 355 120 0 0 chr17 73514427 73514477 -15990076 - AluJo SINE Alu -17 285 236 513 172 14 131 chr17 73514479 73514523 -15990030 - AluJo SINE Alu -159 153 105 2499 85 3 0 chr17 73514523 73514830 -15989723 + AluSx SINE Alu 1 308 -4 513 172 14 131 chr17 73514830 73514930 -15989623 - AluJo SINE Alu -207 105 26 22 0 0 0 chr17 73515014 73515036 -15989517 + AT_rich Low_complexity Low_complexity 1 22 0 239 296 25 0 chr17 73515413 73515494 -15989059 - MIR SINE MIR -6 256 174 326 239 0 0 chr17 73515545 73515616 -15988937 - Charlie2 DNA MER1_type -2784 78 8 494 286 40 23 chr17 73516769 73516944 -15987609 + MIR SINE MIR 83 260 -2 234 0 0 0 chr17 73516983 73517009 -15987544 + (TTA)n Simple_repeat Simple_repeat 1 26 0 273 258 41 31 chr17 73517085 73517182 -15987371 - MIR SINE MIR -96 166 69 417 290 77 33 chr17 73517471 73517654 -15986899 - MIR SINE MIR -3 259 69 22 0 0 0 chr17 73518264 73518286 -15986267 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr17 73518882 73518917 -15985636 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 73519064 73519093 -15985460 + GC_rich Low_complexity Low_complexity 1 29 0 28 86 0 0 chr17 73519134 73519204 -15985349 + GC_rich Low_complexity Low_complexity 1 70 0 190 298 132 41 chr17 73520850 73520971 -15983582 + L3 LINE CR1 182 313 -1264 527 129 69 20 chr17 73521194 73521295 -15983258 - AluJ SINE Alu -15 297 192 857 161 7 14 chr17 73521295 73521438 -15983115 - AluJ SINE Alu -170 142 1 204 339 69 46 chr17 73521574 73521704 -15982849 - MIR3 SINE MIR -7 201 69 304 233 15 128 chr17 73521808 73521941 -15982612 - MIR3 SINE MIR -3 205 88 2292 93 0 32 chr17 73522202 73522515 -15982038 + AluSg SINE Alu 1 303 -7 310 129 32 0 chr17 73522516 73522578 -15981975 + GA-rich Low_complexity Low_complexity 1 64 0 909 169 0 45 chr17 73523042 73523220 -15981333 + AluJo SINE Alu 1 170 -142 2013 118 15 0 chr17 73523247 73523519 -15981034 + AluSq SINE Alu 26 301 -12 2164 115 3 0 chr17 73523713 73524001 -15980552 + AluSx SINE Alu 16 304 -8 327 231 8 131 chr17 73524061 73524191 -15980362 + MIR3 SINE MIR 89 202 -6 926 126 33 110 chr17 73524394 73524444 -15980109 + AluJo SINE Alu 86 138 -174 2124 103 48 3 chr17 73524444 73524736 -15979817 + AluSg SINE Alu 2 306 -4 926 126 33 110 chr17 73524736 73524811 -15979742 + AluJo SINE Alu 138 195 -117 2186 116 3 3 chr17 73524811 73525112 -15979441 - AluSx SINE Alu -10 302 2 926 126 33 110 chr17 73525112 73525167 -15979386 + AluJo SINE Alu 195 253 -59 223 277 139 50 chr17 73525435 73525536 -15979017 + L2 LINE L2 3204 3313 0 1417 108 29 71 chr17 73526068 73526080 -15978473 - AluSg/x SINE Alu 0 312 301 2047 131 44 0 chr17 73526080 73526377 -15978176 - AluSx SINE Alu -2 310 1 1417 108 29 71 chr17 73526377 73526604 -15977949 - AluSg/x SINE Alu -11 301 83 1607 64 5 20 chr17 73526604 73526806 -15977747 - AluSp SINE Alu -11 302 104 999 94 0 29 chr17 73526827 73526965 -15977588 - AluSp SINE Alu -179 134 1 2545 50 0 3 chr17 73526965 73527263 -15977290 - AluY SINE Alu -14 297 1 577 184 0 0 chr17 73527263 73527350 -15977203 - AluS SINE Alu -220 92 6 1631 169 0 62 chr17 73527368 73527529 -15977024 - AluJo SINE Alu -23 289 154 2164 123 0 19 chr17 73527529 73527839 -15976714 - AluSg SINE Alu -5 305 2 1631 169 0 62 chr17 73527839 73527985 -15976568 - AluJo SINE Alu -158 154 1 5343 32 11 3 chr17 73527995 73528625 -15975928 - L1PA5 LINE L1 -2 6152 5518 3974 130 22 33 chr17 73528625 73528905 -15975648 - L1M2 LINE L1 -691 5606 5325 2211 84 0 28 chr17 73528905 73529215 -15975338 - AluSc SINE Alu 0 302 1 3974 130 22 33 chr17 73529215 73529346 -15975207 - L1M2 LINE L1 -972 5325 5194 1836 186 3 3 chr17 73529346 73529658 -15974895 - AluSx SINE Alu 0 312 1 3974 130 22 33 chr17 73529658 73530290 -15974263 - L1M2 LINE L1 -1103 5194 4558 2476 79 10 0 chr17 73530298 73530602 -15973951 - AluSq SINE Alu -6 307 1 2351 122 0 0 chr17 73531582 73531894 -15972659 + AluSx SINE Alu 1 312 0 897 151 108 0 chr17 73531895 73532034 -15972519 + AluSg/x SINE Alu 127 280 -30 217 0 0 0 chr17 73532034 73532058 -15972495 + (TAAA)n Simple_repeat Simple_repeat 3 180 0 1997 128 21 3 chr17 73532777 73533067 -15971486 + AluSx SINE Alu 1 295 -17 2193 102 3 3 chr17 73533072 73533356 -15971197 + AluSg SINE Alu 1 284 -26 1957 161 0 16 chr17 73533748 73534058 -15970495 + AluJo SINE Alu 1 305 -7 1272 124 0 0 chr17 73534241 73534418 -15970135 + AluSg/x SINE Alu 134 310 -2 2281 94 0 10 chr17 73534505 73534802 -15969751 - AluSg SINE Alu -16 294 1 2383 92 3 0 chr17 73535422 73535725 -15968828 + AluSp SINE Alu 1 304 -9 2111 132 0 0 chr17 73536022 73536318 -15968235 - AluJb SINE Alu -16 296 1 1902 125 7 56 chr17 73536987 73537291 -15967262 + AluJb SINE Alu 7 295 -17 957 122 0 0 chr17 73538266 73538397 -15966156 + AluSq/x SINE Alu 3 133 -180 2306 104 0 0 chr17 73538401 73538698 -15965855 + AluSc SINE Alu 1 297 -12 453 287 63 0 chr17 73539767 73539910 -15964643 - MIR3 SINE MIR -12 196 45 2439 78 0 3 chr17 73539932 73540225 -15964328 - AluSc SINE Alu -14 295 4 2193 120 3 0 chr17 73540529 73540828 -15963725 + AluSq SINE Alu 1 300 -13 216 0 0 0 chr17 73541561 73541585 -15962968 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr17 73542039 73542076 -15962477 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr17 73543655 73543684 -15960869 + AT_rich Low_complexity Low_complexity 1 29 0 2198 114 0 3 chr17 73543684 73543974 -15960579 - AluSq SINE Alu -24 289 1 325 179 0 19 chr17 73544026 73544132 -15960421 + (TA)n Simple_repeat Simple_repeat 1 104 0 1484 165 72 54 chr17 73544498 73544832 -15959721 - MER58B DNA MER1_type 0 341 2 2223 132 0 0 chr17 73544985 73545289 -15959264 - AluSx SINE Alu -7 305 2 2466 96 0 0 chr17 73545317 73545630 -15958923 - AluSq SINE Alu 0 313 1 2231 103 10 0 chr17 73545765 73546055 -15958498 + AluSp SINE Alu 1 293 -20 2323 101 0 19 chr17 73546340 73546656 -15957897 + AluSx SINE Alu 1 310 -2 1476 180 81 0 chr17 73546752 73547024 -15957529 + AluJb SINE Alu 1 294 -18 236 338 113 7 chr17 73547541 73547692 -15956861 + L2 LINE L2 2204 2370 -944 687 247 26 30 chr17 73547693 73547924 -15956629 + L2 LINE L2 2487 2716 -598 2222 77 0 0 chr17 73548038 73548312 -15956241 - AluY SINE Alu -37 274 1 2253 101 6 22 chr17 73548313 73548631 -15955922 - AluSq SINE Alu 0 313 1 641 275 177 12 chr17 73548668 73548857 -15955696 + L2 LINE L2 2925 3082 -231 1681 173 4 0 chr17 73548857 73549129 -15955424 + AluJb SINE Alu 35 307 -5 641 275 177 12 chr17 73549129 73549273 -15955280 + L2 LINE L2 3082 3313 0 1705 163 3 20 chr17 73549709 73550009 -15954544 + AluJb SINE Alu 1 295 -17 215 321 165 9 chr17 73550236 73550345 -15954208 + MIR3 SINE MIR 43 168 -40 1430 185 66 3 chr17 73550678 73550981 -15953572 + MER33 DNA MER1_type 1 322 -2 299 51 0 0 chr17 73552375 73552414 -15952139 + U3 snRNA snRNA 1 39 -178 1107 190 24 0 chr17 73554999 73555204 -15949349 - MER20 DNA MER1_type -5 214 5 318 289 27 40 chr17 73555215 73555364 -15949189 - MER5A DNA MER1_type -36 153 7 1952 126 35 0 chr17 73556457 73556742 -15947811 + AluSx SINE Alu 1 295 -17 1660 162 17 17 chr17 73557678 73557818 -15946735 + AluJo SINE Alu 1 140 -172 189 0 0 0 chr17 73557818 73557839 -15946714 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1660 162 17 17 chr17 73557839 73557995 -15946558 + AluJo SINE Alu 139 297 -15 1255 130 19 60 chr17 73558825 73559040 -15945513 - AluJb SINE Alu -20 292 87 1658 166 75 0 chr17 73560563 73560841 -15943712 + AluJo SINE Alu 1 299 -13 1796 163 40 0 chr17 73560903 73561180 -15943373 + AluJb SINE Alu 1 288 -24 256 226 36 24 chr17 73562438 73562522 -15942031 + (CCGCG)n Simple_repeat Simple_repeat 2 86 0 728 128 7 60 chr17 73563125 73563141 -15941412 - FLAM_C SINE Alu -170 142 127 2409 84 0 3 chr17 73563141 73563449 -15941104 - AluSx SINE Alu -5 307 1 728 128 7 60 chr17 73563449 73563581 -15940972 - FLAM_C SINE Alu -185 127 2 1368 122 0 78 chr17 73564114 73564344 -15940209 - AluSg/x SINE Alu -10 302 91 1003 70 0 16 chr17 73564345 73564474 -15940079 - AluYb8 SINE Alu -187 131 5 1587 160 16 51 chr17 73564948 73565260 -15939293 + AluJo SINE Alu 1 301 -11 949 164 10 130 chr17 73565717 73565915 -15938638 - L1MC4 LINE L1 -2 8040 7887 2160 111 7 0 chr17 73565915 73566204 -15938349 + AluSx SINE Alu 1 291 -21 949 164 10 130 chr17 73566204 73566297 -15938256 - L1MC4 LINE L1 -155 7887 7784 * 1451 223 76 42 chr17 73566296 73566745 -15937808 - L1MC4a LINE L1 -1215 6593 6130 534 261 144 87 chr17 73566795 73567067 -15937486 + L1ME4a LINE L1 5541 5796 -325 2238 113 7 0 chr17 73567067 73567359 -15937194 + AluSx SINE Alu 1 294 -18 534 261 144 87 chr17 73567359 73567439 -15937114 + L1ME4a LINE L1 5796 5870 -251 1896 152 0 26 chr17 73567439 73567748 -15936805 - AluJb SINE Alu -11 301 1 534 261 144 87 chr17 73567748 73567789 -15936764 + L1ME4a LINE L1 5870 5907 -214 1910 107 0 4 chr17 73567789 73568041 -15936512 + AluSx SINE Alu 1 251 -61 534 261 144 87 chr17 73568041 73568194 -15936359 + L1ME4a LINE L1 5907 6120 -1 1830 110 10 70 chr17 73568458 73568790 -15935763 + AluSx SINE Alu 1 314 0 3763 255 142 34 chr17 73568796 73570153 -15934400 - HAL1 LINE L1 -3 2504 916 1995 203 17 3 chr17 73570153 73570513 -15934040 + MLT1A1 LTR MaLR 1 365 0 3763 255 142 34 chr17 73570513 73570898 -15933655 - HAL1 LINE L1 -1591 916 574 195 129 0 0 chr17 73571898 73571929 -15932624 + (TG)n Simple_repeat Simple_repeat 2 32 0 778 183 0 29 chr17 73572155 73572292 -15932261 + FLAM_C SINE Alu 1 133 0 247 244 111 22 chr17 73573594 73573622 -15930931 + HAL1b LINE L1 1191 1215 -133 2179 96 6 29 chr17 73573622 73573935 -15930618 + AluSq SINE Alu 1 306 -7 247 244 111 22 chr17 73573935 73574041 -15930512 + HAL1b LINE L1 1215 1337 -11 256 248 21 35 chr17 73574143 73574284 -15930269 + (CATATA)n Simple_repeat Simple_repeat 6 144 0 2112 119 7 3 chr17 73574374 73574668 -15929885 + AluSq SINE Alu 3 297 -16 222 330 43 11 chr17 73574990 73575166 -15929387 + MIR SINE MIR 10 192 -70 1530 104 5 18 chr17 73575470 73575691 -15928862 - AluSq SINE Alu -15 298 81 1767 149 9 65 chr17 73575700 73576023 -15928530 - AluJo SINE Alu -7 305 1 1421 157 78 0 chr17 73576059 73576301 -15928252 - AluJo SINE Alu -17 295 35 725 163 0 23 chr17 73576320 73576449 -15928104 - FLAM_C SINE Alu -4 129 4 1166 158 0 0 chr17 73576613 73576790 -15927763 + AluJb SINE Alu 134 310 -2 27 0 0 0 chr17 73576790 73576817 -15927736 + AT_rich Low_complexity Low_complexity 1 27 0 2248 116 3 0 chr17 73576965 73577275 -15927278 - AluSq SINE Alu -2 311 1 688 275 36 5 chr17 73577367 73577560 -15926993 + MLT1A2 LTR MaLR 176 374 0 1859 146 30 14 chr17 73577648 73577943 -15926610 - AluSx SINE Alu -12 300 1 1885 178 3 0 chr17 73577989 73578287 -15926266 - AluJb SINE Alu -13 299 1 198 0 0 0 chr17 73578359 73578381 -15926172 + (T)n Simple_repeat Simple_repeat 1 22 0 838 197 22 6 chr17 73578515 73578698 -15925855 - MER53 DNA DNA -3 186 1 1880 127 3 46 chr17 73579133 73579457 -15925096 + AluJb SINE Alu 3 312 0 285 274 75 9 chr17 73579955 73580061 -15924492 + MLT1F LTR MaLR 20 132 -410 2153 112 0 3 chr17 73580128 73580449 -15924104 + AluSq SINE Alu 1 320 0 252 257 220 9 chr17 73580482 73580591 -15923962 + MLT1G LTR MaLR 143 274 -281 372 209 132 23 chr17 73580847 73580976 -15923577 + MLT1G LTR MaLR 440 582 -8 240 244 167 0 chr17 73581748 73581826 -15922727 + L2 LINE L2 3168 3258 -14 269 348 35 0 chr17 73582049 73582190 -15922363 + MIR3 SINE MIR 14 159 -49 1546 165 112 66 chr17 73582492 73582648 -15921905 + MLT1D LTR MaLR 1 148 -357 722 226 0 0 chr17 73582648 73582781 -15921772 - FLAM_A SINE Alu 0 133 1 1546 165 112 66 chr17 73582781 73583078 -15921475 + MLT1D LTR MaLR 148 475 -30 487 318 36 9 chr17 73583153 73583373 -15921180 - MIR SINE MIR -36 226 1 219 382 18 36 chr17 73583558 73583668 -15920885 - MIR SINE MIR -55 153 46 2043 137 40 3 chr17 73584579 73584878 -15919675 + AluSx SINE Alu 1 310 -2 2119 112 3 45 chr17 73585293 73585606 -15918947 - AluSx SINE Alu -12 300 1 1130 178 33 9 chr17 73585746 73585959 -15918594 + AluJo SINE Alu 86 303 -9 370 294 25 25 chr17 73586046 73586165 -15918388 - MIR SINE MIR -124 138 20 2180 105 0 58 chr17 73586262 73586394 -15918159 + AluSx SINE Alu 4 142 -170 1831 53 0 0 chr17 73586394 73586603 -15917950 + AluY SINE Alu 82 290 -21 2180 105 0 58 chr17 73586603 73586795 -15917758 + AluSx SINE Alu 142 309 -3 1348 103 0 0 chr17 73586795 73586969 -15917584 + AluSq SINE Alu 134 307 -6 3511 124 27 23 chr17 73587585 73588110 -15916443 + MER1A DNA MER1_type 1 527 0 400 302 154 30 chr17 73588184 73588548 -15916005 + L2 LINE L2 2254 2662 -652 1070 146 37 0 chr17 73588590 73588754 -15915799 - AluSg/x SINE Alu -9 301 132 2376 80 7 3 chr17 73588754 73589054 -15915499 - AluY SINE Alu -10 301 1 1093 161 4 95 chr17 73589184 73589418 -15915135 + AluJo SINE Alu 85 298 -14 2342 99 0 10 chr17 73589418 73589731 -15914822 + AluSx SINE Alu 1 310 -2 182 328 82 25 chr17 73589847 73589969 -15914584 + L2 LINE L2 3136 3264 -8 * 389 302 12 89 chr17 73589957 73590126 -15914427 - L2 LINE L2 0 3272 3117 347 246 113 7 chr17 73590237 73590379 -15914174 - L1ME4a LINE L1 -2 6119 5963 246 132 0 4 chr17 73590406 73590453 -15914100 - L1MB7 LINE L1 -1 6333 6136 1735 194 0 7 chr17 73590668 73590961 -15913592 + AluJo SINE Alu 1 291 -21 1872 117 88 0 chr17 73591237 73591510 -15913043 + AluSg SINE Alu 1 297 -13 563 297 191 33 chr17 73591516 73591846 -15912707 - L2 LINE L2 -661 2653 2272 928 100 8 23 chr17 73592016 73592146 -15912407 + FLAM_C SINE Alu 7 134 -9 2525 73 0 0 chr17 73592390 73592691 -15911862 + AluY SINE Alu 1 301 -10 2438 76 0 10 chr17 73593451 73593753 -15910800 - AluY SINE Alu -12 299 1 415 193 12 236 chr17 73593948 73594068 -15910485 + MIR SINE MIR 57 92 -170 1761 144 25 18 chr17 73594068 73594353 -15910200 + AluJo SINE Alu 1 287 -25 415 193 12 236 chr17 73594353 73594486 -15910067 + MIR SINE MIR 92 253 -9 808 128 0 40 chr17 73594933 73595058 -15909495 - AluSg/x SINE Alu -20 290 171 440 212 88 53 chr17 73595361 73595420 -15909133 + HAL1 LINE L1 36 91 -2416 1977 143 7 7 chr17 73595420 73595713 -15908840 + AluJb SINE Alu 3 295 -17 440 212 88 53 chr17 73595713 73595823 -15908730 + HAL1 LINE L1 91 211 -2296 2057 260 83 48 chr17 73595957 73596998 -15907555 + HAL1 LINE L1 446 1522 -985 1539 166 49 52 chr17 73597634 73597941 -15906612 + AluJb SINE Alu 1 306 -6 909 182 0 0 chr17 73597954 73598102 -15906451 - FRAM SINE Alu -18 158 11 1960 167 0 3 chr17 73598114 73598413 -15906140 - AluJo SINE Alu -14 298 1 213 211 0 0 chr17 73598475 73598527 -15906026 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 1011 161 0 0 chr17 73598635 73598815 -15905738 + (TA)n Simple_repeat Simple_repeat 1 180 0 1127 145 38 119 chr17 73598853 73598978 -15905575 - L1MB7 LINE L1 -16 6168 6034 2412 89 0 3 chr17 73598978 73599281 -15905272 - AluY SINE Alu -9 302 1 1127 145 38 119 chr17 73599281 73599473 -15905080 - L1MB7 LINE L1 -150 6034 5877 3291 181 33 44 chr17 73599487 73599544 -15905009 - L1MB4 LINE L1 -6 6174 6118 1997 159 0 3 chr17 73599544 73599834 -15904719 - AluJb SINE Alu -21 291 3 3291 181 33 44 chr17 73599834 73600543 -15904010 - L1MB4 LINE L1 -62 6118 5417 23 0 0 0 chr17 73600543 73600566 -15903987 + AT_rich Low_complexity Low_complexity 1 23 0 1900 139 35 0 chr17 73600582 73600869 -15903684 + AluSq SINE Alu 1 297 -16 307 238 168 20 chr17 73600874 73600975 -15903578 - L1MC4 LINE L1 -1339 6703 6588 2281 101 7 0 chr17 73601008 73601304 -15903249 + AluSx SINE Alu 1 298 -14 4264 108 90 78 chr17 73601475 73602827 -15901726 - pTR5 LTR ERV1 0 2438 743 205 282 0 0 chr17 73604362 73604440 -15900113 + CT-rich Low_complexity Low_complexity 3 80 0 210 37 0 0 chr17 73604507 73604534 -15900019 + (CCG)n Simple_repeat Simple_repeat 2 28 0 221 135 19 0 chr17 73604722 73604774 -15899779 + G-rich Low_complexity Low_complexity 4 56 0 1842 175 0 19 chr17 73606036 73606345 -15898208 + AluJo SINE Alu 1 303 -9 263 330 11 11 chr17 73606499 73606593 -15897960 - MER102b DNA MER1_type -18 323 230 1821 123 12 0 chr17 73606595 73606848 -15897705 + AluSx SINE Alu 1 256 -56 459 251 79 55 chr17 73607068 73607381 -15897172 + L1MC5 LINE L1 7500 7827 -134 2193 125 0 3 chr17 73607381 73607676 -15896877 + AluSx SINE Alu 1 294 -18 459 251 79 55 chr17 73607676 73607781 -15896772 + L1MC5 LINE L1 7827 7928 -33 1744 159 37 10 chr17 73607837 73608133 -15896420 - AluJo SINE Alu -8 304 1 25 31 0 0 chr17 73608317 73608349 -15896204 + AT_rich Low_complexity Low_complexity 1 32 0 314 209 0 30 chr17 73608785 73608852 -15895701 - AluJ/monomer SINE Alu -8 292 236 261 239 42 0 chr17 73608854 73608925 -15895628 - MIR SINE MIR -78 130 57 266 248 56 40 chr17 73609964 73610089 -15894464 - MIR3 SINE MIR -15 193 67 946 255 85 22 chr17 73610448 73610766 -15893787 - MER46C DNA MER2_type 0 338 1 239 223 325 5 chr17 73611657 73611778 -15892775 + MIR3 SINE MIR 27 178 -30 210 152 15 30 chr17 73613923 73613989 -15890564 + C-rich Low_complexity Low_complexity 2 66 0 382 244 141 32 chr17 73615124 73615280 -15889273 + MIR SINE MIR 60 232 -30 1296 81 6 0 chr17 73615293 73615454 -15889099 - AluSg/x SINE Alu -6 304 143 314 236 134 39 chr17 73615573 73615700 -15888853 + L1MDa LINE L1 1471 1609 -4931 1381 253 74 23 chr17 73615705 73616288 -15888265 + L1M4 LINE L1 4596 5222 -924 2006 100 15 85 chr17 73616288 73616619 -15887934 + AluSc SINE Alu 1 308 -1 1381 253 74 23 chr17 73616619 73616735 -15887818 + L1M4 LINE L1 5222 5331 -815 3361 158 35 11 chr17 73617013 73617647 -15886906 + L1MA5 LINE L1 5647 6295 -5 1355 103 81 39 chr17 73619748 73619982 -15884571 - THE1B LTR MaLR -120 244 1 1249 91 0 0 chr17 73620241 73620395 -15884158 + AluSx SINE Alu 2 155 -157 2487 77 0 3 chr17 73620878 73621189 -15883364 + AluY SINE Alu 1 310 -1 23 46 6 0 chr17 73621542 73621627 -15882926 + AT_rich Low_complexity Low_complexity 1 44 0 1914 202 13 33 chr17 73622322 73622718 -15881835 + MLT1B LTR MaLR 3 390 0 197 59 59 0 chr17 73622892 73622926 -15881627 + GA-rich Low_complexity Low_complexity 3 38 0 2050 136 13 0 chr17 73623412 73623720 -15880833 - AluSx SINE Alu 0 312 1 635 219 0 0 chr17 73623722 73623845 -15880708 + MLT1A1 LTR MaLR 243 365 0 2576 201 35 18 chr17 73623845 73624417 -15880136 + MER89-int LTR ERV1 6220 6801 0 1057 204 27 6 chr17 73624417 73624717 -15879836 + MER89 LTR ERV1 1 406 -153 346 285 123 16 chr17 73624818 73625071 -15879482 - L1ME4a LINE L1 -11 6110 5831 386 246 157 15 chr17 73625126 73625260 -15879293 + MIR SINE MIR 69 221 -41 240 302 10 42 chr17 73626462 73626558 -15877995 - MIR SINE MIR -11 251 159 535 245 84 0 chr17 73626638 73626781 -15877772 - MIR SINE MIR -88 174 20 229 214 193 14 chr17 73626803 73626948 -15877605 + L1ME3A LINE L1 4280 4450 -1696 401 299 57 13 chr17 73627145 73627302 -15877251 + MIR SINE MIR 91 254 -8 284 79 0 0 chr17 73627525 73627563 -15876990 - Alu SINE Alu -261 38 1 331 206 0 0 chr17 73627570 73627638 -15876915 + L1ME3A LINE L1 5596 5663 -458 2641 58 0 0 chr17 73627754 73628065 -15876488 + AluY SINE Alu 1 311 0 869 278 5 0 chr17 73628323 73628532 -15876021 + MER58A DNA MER1_type 15 224 0 298 164 0 16 chr17 73628533 73628594 -15875959 + L1ME3A LINE L1 5713 5772 -349 1888 138 0 77 chr17 73628647 73628973 -15875580 + AluSx SINE Alu 1 301 -11 567 239 34 62 chr17 73628983 73629159 -15875394 + MER5B DNA MER1_type 2 172 -6 1231 191 0 5 chr17 73629169 73629379 -15875174 + AluSq SINE Alu 1 209 -104 6159 149 201 28 chr17 73629382 73630827 -15873726 - pTR5 LTR ERV1 0 2438 743 614 156 0 0 chr17 73630827 73630923 -15873630 + AluSq SINE Alu 206 301 -12 351 256 17 17 chr17 73631046 73631163 -15873390 + L1ME4a LINE L1 5980 6096 -25 249 254 17 0 chr17 73631434 73631493 -15873060 + MIR SINE MIR 200 259 -3 2269 72 34 10 chr17 73631795 73632086 -15872467 - AluY SINE Alu -13 298 1 271 222 125 0 chr17 73632200 73632272 -15872281 - MIR SINE MIR -114 148 68 236 186 0 0 chr17 73632331 73632374 -15872179 - MER5B DNA MER1_type -135 43 1 261 242 0 16 chr17 73632384 73632446 -15872107 - MER5B DNA MER1_type -1 177 117 2275 102 0 3 chr17 73632448 73632741 -15871812 + AluSq SINE Alu 1 292 -21 719 209 40 12 chr17 73632756 73632956 -15871597 + L1ME3A LINE L1 5968 6170 0 198 0 0 0 chr17 73633155 73633177 -15871376 + (A)n Simple_repeat Simple_repeat 1 22 0 1729 166 0 14 chr17 73633177 73633455 -15871098 + AluJb SINE Alu 1 274 -38 1507 269 52 17 chr17 73633702 73634163 -15870390 + MLT1J LTR MaLR 35 511 0 265 343 19 0 chr17 73634812 73634917 -15869636 + MIR3 SINE MIR 91 197 -11 847 162 7 7 chr17 73635011 73635165 -15869388 - FRAM SINE Alu -22 154 1 406 185 65 11 chr17 73635323 73635415 -15869138 + L1MC5 LINE L1 7079 7175 -786 1974 127 0 10 chr17 73635419 73635733 -15868820 + AluSq SINE Alu 2 312 -1 584 206 33 27 chr17 73635737 73635921 -15868632 + L1MC5 LINE L1 7474 7658 -303 319 327 0 40 chr17 73636017 73636118 -15868435 + MIR SINE MIR 51 147 -61 293 261 149 56 chr17 73636906 73637067 -15867486 + MIR SINE MIR 15 190 -18 1821 114 29 11 chr17 73637110 73637390 -15867163 - AluJo SINE Alu -22 290 6 1843 117 0 4 chr17 73637446 73637711 -15866842 + AluSx SINE Alu 1 264 -48 1013 194 36 137 chr17 73638140 73638338 -15866215 - L1ME2 LINE L1 -9 6155 5939 2099 107 33 0 chr17 73638338 73638638 -15865915 - AluSx SINE Alu -2 310 1 1013 194 36 137 chr17 73638638 73638813 -15865740 - L1ME2 LINE L1 -225 5939 5830 1805 106 0 27 chr17 73638813 73638973 -15865580 - L1MA2 LINE L1 -3 6301 6151 2031 135 3 0 chr17 73638973 73639284 -15865269 - AluSq SINE Alu -1 312 1 1805 106 0 27 chr17 73639284 73639415 -15865138 - L1MA2 LINE L1 -153 6151 6018 1013 194 36 137 chr17 73639415 73639479 -15865074 - L1ME2 LINE L1 -334 5830 5761 335 235 184 46 chr17 73639489 73639574 -15864979 - MER20B DNA MER1_type -114 669 597 1403 187 33 27 chr17 73639574 73639874 -15864679 + AluJo SINE Alu 1 302 -10 335 235 184 46 chr17 73639874 73640005 -15864548 - MER20B DNA MER1_type -186 597 423 355 125 0 36 chr17 73640524 73640580 -15863973 - AluJo SINE Alu -14 288 235 5138 149 46 82 chr17 73640580 73642011 -15862542 + pTR5 LTR ERV1 743 2295 -143 1322 187 0 24 chr17 73642021 73642267 -15862286 - AluJo SINE Alu -72 240 1 328 317 49 16 chr17 73642833 73642956 -15861597 + MIR SINE MIR 117 243 -19 206 286 0 0 chr17 73642926 73642968 -15861585 + L2 LINE L2 3218 3259 -13 * 322 75 0 0 chr17 73643277 73643317 -15861236 - AluSq/x SINE Alu -182 120 81 2087 107 0 3 chr17 73643901 73644192 -15860361 + AluSg SINE Alu 5 294 -16 832 253 116 63 chr17 73644236 73644334 -15860219 + Zaphod DNA AcHobo 1 92 -3939 2026 136 7 0 chr17 73644334 73644644 -15859909 + AluSx SINE Alu 1 312 0 832 253 116 63 chr17 73644644 73644908 -15859645 + Zaphod DNA AcHobo 92 382 -3649 450 185 25 0 chr17 73644912 73644993 -15859560 + Zaphod DNA AcHobo 500 582 -3449 703 109 20 0 chr17 73644993 73645094 -15859459 - MER75 DNA T2_type 0 514 412 232 255 0 0 chr17 73645094 73645141 -15859412 + polypyrimidine Low_complexity Low_complexity 3 49 0 326 71 0 0 chr17 73645141 73645183 -15859370 - MER75 DNA T2_type -54 450 409 224 189 0 0 chr17 73645184 73645221 -15859332 + polypyrimidine Low_complexity Low_complexity 1 37 0 1976 123 0 3 chr17 73645221 73645514 -15859039 - AluSx SINE Alu -20 292 1 3033 108 2 0 chr17 73645515 73645942 -15858611 - MER75 DNA T2_type -85 429 2 703 152 150 78 chr17 73645954 73646020 -15858533 + Zaphod DNA AcHobo 583 643 -3388 2214 71 6 39 chr17 73646020 73646331 -15858222 - AluY SINE Alu -10 301 1 703 152 150 78 chr17 73646331 73646503 -15858050 + Zaphod DNA AcHobo 643 801 -3230 2151 93 7 13 chr17 73646503 73646804 -15857749 - AluSg SINE Alu -10 300 2 703 152 150 78 chr17 73646804 73646938 -15857615 + Zaphod DNA AcHobo 801 983 -3048 2293 77 3 0 chr17 73646945 73647243 -15857310 - AluY SINE Alu -12 299 1 395 159 133 0 chr17 73647260 73647373 -15857180 + Zaphod DNA AcHobo 3626 3753 -278 855 99 0 0 chr17 73647375 73647496 -15857057 + AluSg/x SINE Alu 190 310 0 1029 175 5 5 chr17 73647504 73647698 -15856855 + Zaphod DNA AcHobo 3809 4002 -29 416 205 24 0 chr17 73648349 73648432 -15856121 - MLT1K LTR MaLR -9 579 495 304 162 29 15 chr17 73649250 73649318 -15855235 - MER53 DNA DNA -120 69 1 1756 122 35 0 chr17 73649597 73649852 -15854701 + AluSq SINE Alu 1 264 -49 204 212 0 0 chr17 73649862 73649928 -15854625 + GA-rich Low_complexity Low_complexity 1 66 0 1061 157 0 0 chr17 73649932 73650091 -15854462 + FRAM SINE Alu 1 153 -23 601 188 71 0 chr17 73650150 73650262 -15854291 - FLAM_A SINE Alu -13 120 1 2093 90 17 3 chr17 73650272 73650561 -15853992 - AluSx SINE Alu -19 293 1 1664 171 17 7 chr17 73652518 73652816 -15851737 - AluJo SINE Alu -1 311 11 1601 97 90 76 chr17 73652874 73653163 -15851390 - AluSx SINE Alu -19 293 1 1784 150 27 0 chr17 73653165 73653459 -15851094 - AluSg SINE Alu -8 302 1 411 269 62 25 chr17 73654289 73654449 -15850104 + MIR SINE MIR 97 262 0 1380 167 69 4 chr17 73655367 73655643 -15848910 + AluJo SINE Alu 1 294 -18 279 79 0 0 chr17 73655647 73655685 -15848868 + (GGGGA)n Simple_repeat Simple_repeat 2 39 0 1660 101 147 0 chr17 73655977 73656235 -15848318 + AluSp SINE Alu 2 297 -6 963 96 0 0 chr17 73656237 73656362 -15848191 + AluSg SINE Alu 1 125 -185 392 125 0 0 chr17 73656362 73656418 -15848135 + Tigger3(Golem) DNA MER2_type 2901 2956 -73 26 30 0 0 chr17 73656619 73656652 -15847901 + AT_rich Low_complexity Low_complexity 1 33 0 1981 114 7 0 chr17 73656785 73657094 -15847459 - AluSq SINE Alu 0 311 1 202 97 32 0 chr17 73657859 73657890 -15846663 + G-rich Low_complexity Low_complexity 5 36 0 956 228 47 0 chr17 73661575 73661790 -15842763 + MIR SINE MIR 13 237 -25 330 298 27 58 chr17 73663247 73663282 -15841271 - L1ME4a LINE L1 -1 6120 6085 1745 174 3 3 chr17 73663282 73663593 -15840960 - AluJb SINE Alu -1 311 1 330 298 27 58 chr17 73663593 73663745 -15840808 - L1ME4a LINE L1 -36 6085 5939 585 323 67 4 chr17 73663907 73664176 -15840377 - L1MC4a LINE L1 -1926 5882 5597 32 26 0 0 chr17 73664393 73664432 -15840121 + AT_rich Low_complexity Low_complexity 1 39 0 1031 217 33 0 chr17 73665169 73665381 -15839172 + MER20 DNA MER1_type 1 219 0 234 338 0 12 chr17 73665801 73665881 -15838672 - MIR SINE MIR -89 173 95 957 118 7 13 chr17 73665978 73666130 -15838423 + AluSx SINE Alu 3 153 -159 1841 109 4 0 chr17 73666252 73666508 -15838045 + AluSq SINE Alu 1 257 -56 665 106 0 21 chr17 73666513 73666607 -15837946 - AluS SINE Alu -220 93 2 1973 122 0 0 chr17 73667154 73667432 -15837121 + AluSx SINE Alu 1 278 -34 597 152 0 0 chr17 73667461 73667553 -15837000 - AluS SINE Alu -220 93 2 367 138 0 38 chr17 73667581 73667661 -15836892 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 770 248 91 10 chr17 73667744 73667942 -15836611 + MIR SINE MIR 49 262 0 463 315 75 7 chr17 73668132 73668278 -15836275 - L2 LINE L2 0 3272 3117 2156 112 0 0 chr17 73668480 73668783 -15835770 + AluSx SINE Alu 1 303 -9 1624 147 14 108 chr17 73669958 73670019 -15834534 - L1ME1 LINE L1 -5 6161 6096 2341 63 0 10 chr17 73670019 73670318 -15834235 - AluY SINE Alu -14 297 2 1624 147 14 108 chr17 73670318 73670567 -15833986 - L1ME1 LINE L1 -70 6096 5887 2234 108 7 0 chr17 73670567 73670874 -15833679 - AluSx SINE Alu -3 309 1 1624 147 14 108 chr17 73670874 73670923 -15833630 - L1ME1 LINE L1 -279 5887 5835 1007 196 176 37 chr17 73670923 73671219 -15833334 - MER2 DNA MER2_type -8 337 1 2010 169 55 79 chr17 73671219 73671540 -15833013 - L1ME1 LINE L1 -338 5826 5499 1972 122 26 0 chr17 73671540 73671844 -15832709 - AluSx SINE Alu 0 312 1 1911 123 44 0 chr17 73671851 73672144 -15832409 - AluSx SINE Alu -6 306 1 2010 169 55 79 chr17 73672144 73672402 -15832151 - L1ME1 LINE L1 -671 5493 5230 2168 83 0 35 chr17 73672402 73672715 -15831838 + AluY SINE Alu 1 302 -9 2010 169 55 79 chr17 73672715 73672757 -15831796 - L1ME1 LINE L1 -934 5230 5188 1755 155 10 16 chr17 73672757 73673066 -15831487 + AluJb SINE Alu 6 312 0 2010 169 55 79 chr17 73673066 73673147 -15831406 - L1ME1 LINE L1 -976 5188 5107 1832 156 0 3 chr17 73673147 73673448 -15831105 + AluSx SINE Alu 1 300 -12 2010 169 55 79 chr17 73673448 73673669 -15830884 - L1ME1 LINE L1 -1057 5107 4966 839 161 0 21 chr17 73673669 73673812 -15830741 - FLAM_C SINE Alu 0 143 4 249 98 0 0 chr17 73673830 73673871 -15830682 + (TA)n Simple_repeat Simple_repeat 1 41 0 944 147 6 6 chr17 73673872 73674029 -15830524 + AluJb SINE Alu 134 290 -22 195 42 0 0 chr17 73674029 73674053 -15830500 + (TA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr17 73674738 73674760 -15829793 + GC_rich Low_complexity Low_complexity 1 22 0 1078 238 86 19 chr17 73677286 73677648 -15826905 + L1MC4 LINE L1 7613 7998 -44 1791 149 4 0 chr17 73677746 73678027 -15826526 + AluJb SINE Alu 14 295 -17 660 229 193 0 chr17 73678360 73678578 -15825975 - MIR SINE MIR -1 261 2 1680 201 145 38 chr17 73678749 73679056 -15825497 - L1MC4 LINE L1 -371 7671 7398 1491 173 0 81 chr17 73679056 73679379 -15825174 + AluJb SINE Alu 2 298 -14 1680 201 145 38 chr17 73679379 73679707 -15824846 - L1MC4 LINE L1 -644 7398 6968 26 74 0 0 chr17 73680331 73680385 -15824168 + AT_rich Low_complexity Low_complexity 1 54 0 2041 151 0 10 chr17 73684216 73684520 -15820033 + AluJb SINE Alu 1 301 -11 195 167 0 0 chr17 73684573 73684615 -15819938 + T-rich Low_complexity Low_complexity 1 42 0 762 164 0 0 chr17 73685879 73685995 -15818558 + AluJb SINE Alu 172 287 -25 471 275 65 87 chr17 73686006 73686468 -15818085 - L1ME1 LINE L1 -1529 4617 4166 1028 153 107 37 chr17 73686474 73686689 -15817864 - AluJo SINE Alu -1 311 82 1177 179 155 36 chr17 73686989 73687241 -15817312 + AluJo SINE Alu 1 282 -30 681 179 14 43 chr17 73687249 73687389 -15817164 - MER2 DNA MER2_type -209 136 1 1601 196 52 30 chr17 73687611 73688051 -15816502 + LTR7 LTR ERV1 1 450 0 1800 101 4 0 chr17 73688051 73688288 -15816265 + AluSp SINE Alu 70 307 -6 253 62 0 0 chr17 73688835 73688867 -15815686 - AluSp/q SINE Alu -99 204 173 1952 119 42 0 chr17 73688881 73689167 -15815386 - AluSg SINE Alu -12 298 1 1914 172 61 75 chr17 73689167 73689341 -15815212 - L1M4 LINE L1 -693 5491 5316 1874 171 30 0 chr17 73689341 73689640 -15814913 - AluJb SINE Alu -4 308 1 1914 172 61 75 chr17 73689640 73689699 -15814854 - L1M4 LINE L1 -868 5316 5258 1508 147 0 13 chr17 73689699 73689930 -15814623 - AluJb SINE Alu -1 311 84 1914 172 61 75 chr17 73689930 73690319 -15814234 - L1M4 LINE L1 -926 5258 4848 * 3227 230 53 35 chr17 73690315 73690735 -15813818 - L1ME3 LINE L1 -8 6154 5743 2085 129 0 0 chr17 73690735 73691022 -15813531 - AluSg SINE Alu -23 287 1 3227 230 53 35 chr17 73691022 73691152 -15813401 - L1ME3 LINE L1 -419 5743 5617 2247 100 0 0 chr17 73691152 73691443 -15813110 - AluY SINE Alu -19 292 2 3227 230 53 35 chr17 73691443 73692127 -15812426 - L1ME3 LINE L1 -545 5617 4903 2388 91 0 16 chr17 73692839 73693146 -15811407 - AluSc SINE Alu -7 302 1 899 200 0 24 chr17 73693150 73693315 -15811238 + FRAM SINE Alu 1 153 -23 10663 59 14 30 chr17 73693506 73694889 -15809664 + SVA Other Other 25 1385 -1 2075 123 10 16 chr17 73695165 73695474 -15809079 + AluJb SINE Alu 1 307 -5 1450 174 59 38 chr17 73696192 73696479 -15808074 + AluJo SINE Alu 1 293 -19 2183 105 0 3 chr17 73696481 73696767 -15807786 + AluSc SINE Alu 1 285 -24 237 192 19 0 chr17 73696767 73696819 -15807734 + (TA)n Simple_repeat Simple_repeat 2 54 0 1596 167 26 39 chr17 73696903 73697209 -15807344 + AluJo SINE Alu 1 302 -10 1510 232 41 67 chr17 73697619 73697771 -15806782 + L1M4 LINE L1 4713 4867 -1279 2140 104 31 0 chr17 73697771 73698060 -15806493 - AluSx SINE Alu -14 298 1 1510 232 41 67 chr17 73698060 73698300 -15806253 + L1M4 LINE L1 4867 5088 -1058 2212 99 0 32 chr17 73698300 73698614 -15805939 + AluSq SINE Alu 1 304 -9 1510 232 41 67 chr17 73698614 73698803 -15805750 + L1M4 LINE L1 5088 5280 -866 866 159 0 0 chr17 73751807 73751939 -15752614 + FLAM_C SINE Alu 2 133 0 350 290 11 0 chr17 73751998 73752091 -15752462 + MIR SINE MIR 136 229 -33 1989 135 19 3 chr17 73753237 73753549 -15751004 + L1PA15 LINE L1 5828 6144 -21 21 57 0 0 chr17 73754373 73754408 -15750145 + AT_rich Low_complexity Low_complexity 1 35 0 769 267 57 5 chr17 73756123 73756333 -15748220 - MER58A DNA MER1_type 0 224 4 24 32 0 0 chr17 73758442 73758473 -15746080 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr17 73758826 73758859 -15745694 + AT_rich Low_complexity Low_complexity 1 33 0 204 158 0 0 chr17 73760349 73760387 -15744166 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1508 175 42 11 chr17 73760392 73760655 -15743898 - AluSx SINE Alu -38 274 4 2740 193 60 41 chr17 73760973 73761586 -15742967 - MER82 DNA MER2_type -2 651 27 773 168 36 0 chr17 73762302 73762439 -15742114 - FLAM_C SINE Alu -1 142 1 1312 181 143 38 chr17 73765510 73765825 -15738728 - MER7A DNA MER2_type 0 346 1 302 213 53 0 chr17 73768139 73768214 -15736339 - L2 LINE L2 0 3313 3235 301 291 78 100 chr17 73768216 73768446 -15736107 + L2 LINE L2 3047 3271 -1 337 263 200 19 chr17 73769715 73769875 -15734678 - MER5A DNA MER1_type 0 189 1 13238 110 34 40 chr17 73771941 73772521 -15732032 - Tigger1 DNA MER2_type -1 2417 1835 2467 88 0 0 chr17 73772521 73772827 -15731726 + AluY SINE Alu 1 306 -5 13238 110 34 40 chr17 73772827 73773180 -15731373 - Tigger1 DNA MER2_type -583 1835 1481 2505 63 0 0 chr17 73773180 73773482 -15731071 + AluY SINE Alu 1 302 -9 13238 110 34 40 chr17 73773482 73773910 -15730643 - Tigger1 DNA MER2_type -937 1481 1052 610 28 0 0 chr17 73773910 73773982 -15730571 - L1PA5 LINE L1 -6 6148 6077 13238 110 34 40 chr17 73773982 73774741 -15729812 - Tigger1 DNA MER2_type -1366 1052 309 949 121 8 0 chr17 73774745 73774877 -15729676 + AluSq/x SINE Alu 1 133 -180 2239 102 3 3 chr17 73774880 73775173 -15729380 + AluSx SINE Alu 1 293 -19 1256 122 6 6 chr17 73775173 73775354 -15729199 - Tigger1 DNA MER2_type -2237 181 1 2625 53 0 0 chr17 73775358 73775662 -15728891 - AluY SINE Alu -7 304 1 2173 118 3 0 chr17 73775843 73776140 -15728413 + AluSq SINE Alu 1 298 -15 2306 116 0 0 chr17 73777001 73777312 -15727241 - AluSx SINE Alu 0 312 2 330 265 212 0 chr17 73777331 73777463 -15727090 + MER5B DNA MER1_type 1 160 -18 391 286 58 7 chr17 73778082 73778236 -15726317 + MIR SINE MIR 13 174 -88 306 0 0 0 chr17 73778321 73778355 -15726198 + (TTA)n Simple_repeat Simple_repeat 1 34 0 658 106 0 11 chr17 73778790 73778884 -15725669 + FLAM_C SINE Alu 36 128 -15 290 239 15 0 chr17 73779124 73779191 -15725362 + MER96 DNA MER1_type? 108 175 0 2989 9 0 0 chr17 73779298 73779616 -15724937 - AluYb8 SINE Alu 0 318 1 1795 129 40 91 chr17 73779640 73780035 -15724518 + THE1C LTR MaLR 1 375 0 414 197 262 16 chr17 73780247 73780369 -15724184 + MER5B DNA MER1_type 2 153 -25 714 220 0 0 chr17 73780371 73780548 -15724005 + (TA)n Simple_repeat Simple_repeat 1 177 0 216 176 0 0 chr17 73780549 73780583 -15723970 + (CATA)n Simple_repeat Simple_repeat 4 37 0 302 318 0 0 chr17 73780583 73780671 -15723882 + L1MC4 LINE L1 6616 6703 -1339 * 303 322 0 0 chr17 73780651 73780741 -15723812 - L1MC4 LINE L1 -1339 6703 6614 1577 117 125 8 chr17 73780750 73781006 -15723547 - AluSx SINE Alu -26 286 1 302 232 254 14 chr17 73781039 73781181 -15723372 - MER5A DNA MER1_type -3 186 11 573 235 85 0 chr17 73781728 73781881 -15722672 + MIR SINE MIR 12 177 -85 289 326 30 44 chr17 73782435 73782570 -15721983 - L2 LINE L2 -1 3312 3180 1941 104 15 4 chr17 73783560 73783819 -15720734 + AluSx SINE Alu 35 296 -16 2109 187 6 3 chr17 73783910 73784274 -15720279 + MLT1A1 LTR MaLR 1 365 0 287 371 29 7 chr17 73784303 73784443 -15720110 - L3 LINE CR1 -483 1094 952 1173 224 168 57 chr17 73784466 73784925 -15719628 + MLT1E2 LTR MaLR 1 510 -116 2373 117 57 21 chr17 73784940 73785324 -15719229 + MSTB LTR MaLR 2 399 -27 292 103 35 17 chr17 73785325 73785383 -15719170 + CT-rich Low_complexity Low_complexity 2 60 0 2134 114 4 0 chr17 73785383 73785663 -15718890 - AluSq SINE Alu -32 281 1 237 105 26 0 chr17 73785663 73785701 -15718852 + MSTB LTR MaLR 388 426 0 * 394 174 144 12 chr17 73785701 73785794 -15718759 + MLT1E3 LTR MaLR 401 623 -1 351 222 33 22 chr17 73785913 73786003 -15718550 + LTR45 LTR ERV1 435 525 0 353 275 12 36 chr17 73786375 73786542 -15718011 - L1MC4a LINE L1 -1862 5946 5784 1151 104 0 0 chr17 73786558 73786712 -15717841 + MLT1A1 LTR MaLR 1 154 -211 814 50 20 0 chr17 73786712 73786812 -15717741 - AluSc SINE Alu -182 127 26 1246 97 0 0 chr17 73786812 73786966 -15717587 + AluSc SINE Alu 143 296 -13 1157 210 28 9 chr17 73786966 73787180 -15717373 + MLT1A1 LTR MaLR 148 365 0 1209 277 67 46 chr17 73787194 73788135 -15716418 - L1MC4a LINE L1 -514 5650 4765 180 0 0 0 chr17 73788197 73788217 -15716336 + (T)n Simple_repeat Simple_repeat 1 20 0 400 274 65 61 chr17 73788352 73788407 -15716146 + L1ME LINE L1 5531 5584 -537 2232 109 0 3 chr17 73788407 73788730 -15715823 - AluSx SINE Alu 0 322 1 400 274 65 61 chr17 73788730 73788902 -15715651 + L1ME LINE L1 5584 5761 -360 578 272 137 50 chr17 73789343 73789685 -15714868 + MLT1K LTR MaLR 183 554 -34 2489 82 0 0 chr17 73789710 73790013 -15714540 + AluSq SINE Alu 1 303 -10 213 281 73 10 chr17 73790824 73790920 -15713633 + MIR SINE MIR 97 198 -64 2377 112 0 0 chr17 73791992 73792304 -15712249 - AluSx SINE Alu 0 312 1 955 216 0 60 chr17 73793757 73793975 -15710578 - MER58A DNA MER1_type -19 205 1 230 258 32 0 chr17 73793981 73794043 -15710510 + L2 LINE L2 2325 2388 -926 599 265 121 29 chr17 73794078 73794306 -15710247 - LTR16A1 LTR ERVL 0 457 199 1882 135 52 22 chr17 73794306 73794670 -15709883 + THE1C LTR MaLR 1 375 0 599 265 121 29 chr17 73794670 73794713 -15709840 - LTR16A1 LTR ERVL -258 199 161 1165 241 127 51 chr17 73794732 73794798 -15709755 - MLT1D LTR MaLR 0 505 445 2458 65 3 13 chr17 73794798 73795131 -15709422 + AluY SINE Alu 1 311 0 1165 241 127 51 chr17 73795131 73795513 -15709040 - MLT1D LTR MaLR -60 445 23 316 323 109 31 chr17 73795805 73796099 -15708454 + L2 LINE L2 2442 2758 -556 898 179 79 16 chr17 73796130 73796320 -15708233 - MER3 DNA MER1_type 0 209 8 247 233 0 155 chr17 73796608 73796699 -15707854 + L2 LINE L2 3164 3231 -41 2114 123 7 0 chr17 73796699 73796984 -15707569 - AluSx SINE Alu -25 287 1 247 233 0 155 chr17 73796984 73797021 -15707532 + L2 LINE L2 3231 3272 0 780 168 28 0 chr17 73798362 73798505 -15706048 - MER69 DNA AcHobo 0 2526 2380 278 177 32 0 chr17 73798542 73798604 -15705949 + L1MC4 LINE L1 6640 6703 -1339 347 0 23 0 chr17 73798604 73798647 -15705906 + (TA)n Simple_repeat Simple_repeat 2 45 0 968 172 0 39 chr17 73798647 73798827 -15705726 - AluJb SINE Alu -139 173 1 302 148 19 0 chr17 73798898 73798952 -15705601 - MER69 DNA AcHobo -2471 55 1 207 0 0 0 chr17 73799340 73799363 -15705190 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 742 185 41 3 chr17 73799762 73799937 -15704616 + MIR SINE MIR 19 196 -62 741 132 17 29 chr17 73800026 73800264 -15704289 + CT-rich Low_complexity Low_complexity 1 234 0 2017 120 32 26 chr17 73800266 73800575 -15703978 - AluSq SINE Alu -2 311 1 2446 144 3 22 chr17 73800577 73800669 -15703884 - MSTC LTR MaLR -67 361 269 1603 139 4 4 chr17 73800669 73800907 -15703646 - AluJo SINE Alu -19 293 56 2446 144 3 22 chr17 73800907 73801182 -15703371 - MSTC LTR MaLR -159 269 1 1435 238 56 44 chr17 73801361 73801858 -15702695 + MLT1D LTR MaLR 1 467 0 641 174 0 0 chr17 73801863 73801961 -15702592 + AluS SINE Alu 2 99 -214 27 0 0 0 chr17 73801980 73802007 -15702546 + AT_rich Low_complexity Low_complexity 1 27 0 376 50 118 6 chr17 73802017 73802178 -15702375 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 387 103 72 16 chr17 73802138 73802389 -15702164 + (TTATA)n Simple_repeat Simple_repeat 1 265 0 405 0 0 0 chr17 73802389 73802434 -15702119 + (CA)n Simple_repeat Simple_repeat 2 46 0 539 259 81 30 chr17 73802814 73803050 -15701503 - MIR SINE MIR 0 262 15 969 172 141 0 chr17 73804025 73804217 -15700336 + MER20 DNA MER1_type 1 219 0 22 0 0 0 chr17 73804578 73804600 -15699953 + AT_rich Low_complexity Low_complexity 1 22 0 227 31 31 0 chr17 73804600 73804632 -15699921 + (CA)n Simple_repeat Simple_repeat 1 33 0 2269 78 0 78 chr17 73805313 73805633 -15698920 + AluSc SINE Alu 1 295 -14 721 291 36 33 chr17 73806174 73806504 -15698049 - MLT1I LTR MaLR -6 403 73 451 274 25 30 chr17 73807346 73807547 -15697006 - MIR SINE MIR -5 257 58 297 247 24 12 chr17 73807680 73807765 -15696788 - L1ME LINE L1 -515 5606 5521 1135 32 0 53 chr17 73807954 73808143 -15696410 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2256 102 7 3 chr17 73808173 73808476 -15696077 - AluSc SINE Alu -5 304 1 384 278 73 0 chr17 73808488 73808639 -15695914 + MIR SINE MIR 90 251 -11 275 293 74 79 chr17 73809222 73809383 -15695170 - MIR SINE MIR -36 226 65 2158 76 0 57 chr17 73809383 73809684 -15694869 - AluSg SINE Alu -1 309 26 275 293 74 79 chr17 73809684 73809737 -15694816 - MIR SINE MIR -197 65 13 * 291 303 13 0 chr17 73809733 73809809 -15694744 - L2 LINE L2 -3 3310 3234 1266 225 116 59 chr17 73809833 73810238 -15694315 - MLT1D LTR MaLR -2 503 66 1806 97 116 0 chr17 73810238 73810497 -15694056 + AluY SINE Alu 1 289 -22 1266 225 116 59 chr17 73810497 73810567 -15693986 - MLT1D LTR MaLR -439 66 1 2153 121 0 7 chr17 73810638 73810973 -15693580 + AluSx SINE Alu 1 312 0 336 57 0 38 chr17 73812080 73812133 -15692420 - L1PA6 LINE L1 0 6154 6104 1209 186 193 94 chr17 73812974 73813420 -15691133 + MLT1D LTR MaLR 16 505 0 1990 139 3 23 chr17 73813493 73813802 -15690751 - AluSx SINE Alu -9 303 1 2320 137 21 16 chr17 73815051 73815439 -15689114 - MLT1B LTR MaLR 0 390 1 1660 235 40 29 chr17 73815626 73816047 -15688506 + MLT1H LTR MaLR 117 542 -7 193 333 39 20 chr17 73816887 73816989 -15687564 - MIR3 SINE MIR -22 186 83 2259 51 29 4 chr17 73817697 73817997 -15686556 - AluY SINE Alu 0 307 1 316 248 16 64 chr17 73818013 73818138 -15686415 + MLT1K LTR MaLR 467 585 -3 2761 125 5 23 chr17 73818177 73818610 -15685943 + MER61B LTR ERV1 1 425 0 631 221 66 7 chr17 73820077 73820213 -15684340 - MER92C LTR ERV1 -33 521 378 559 237 105 68 chr17 73820585 73820727 -15683826 + MIR SINE MIR 12 147 -115 2544 17 42 0 chr17 73820727 73821014 -15683539 + AluY SINE Alu 1 299 -12 2505 200 50 42 chr17 73821020 73821639 -15682914 - MLT1E3 LTR MaLR 0 624 1 559 237 105 68 chr17 73821639 73821708 -15682845 + MIR SINE MIR 151 238 -24 189 0 0 0 chr17 73822799 73822820 -15681733 + (CA)n Simple_repeat Simple_repeat 1 21 0 2131 136 0 0 chr17 73823988 73824282 -15680271 - AluSx SINE Alu -18 294 1 1718 176 17 13 chr17 73824601 73824902 -15679651 - AluJb SINE Alu -10 302 1 34 89 0 0 chr17 73827594 73827684 -15676869 + GC_rich Low_complexity Low_complexity 1 90 0 224 105 26 0 chr17 73828315 73828353 -15676200 + L2 LINE L2 3214 3252 -20 343 213 13 0 chr17 73828931 73829006 -15675547 + MIR SINE MIR 121 196 -66 1618 137 113 3 chr17 73829025 73829309 -15675244 - MER7A DNA MER2_type -32 314 2 267 267 94 63 chr17 73830265 73830456 -15674097 + L2 LINE L2 2560 2756 -558 8348 50 9 0 chr17 73830592 73831549 -15673004 - LTR5 LTR ERVK -3 966 1 2705 165 11 11 chr17 73831770 73832237 -15672316 + MLT1C LTR MaLR 1 467 0 1692 161 3 33 chr17 73833129 73833433 -15671120 - AluJo SINE Alu -17 295 1 420 236 101 73 chr17 73833776 73833954 -15670599 + MER5A DNA MER1_type 7 189 0 329 299 10 0 chr17 73834216 73834313 -15670240 + MIR3 SINE MIR 90 187 -21 384 331 0 8 chr17 73834429 73834556 -15669997 + MIR3 SINE MIR 15 140 -68 1994 250 33 45 chr17 73834580 73835455 -15669098 + L1MDa LINE L1 1880 2790 -3902 1736 252 15 8 chr17 73835457 73835937 -15668616 + L1MDa LINE L1 2801 3283 -3257 * 2182 238 20 11 chr17 73835911 73836448 -15668105 + L1ME1 LINE L1 5991 6532 -28 204 40 0 0 chr17 73836468 73836493 -15668060 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 327 307 80 7 chr17 73836512 73836649 -15667904 + L1ME LINE L1 5684 5830 -332 216 0 0 0 chr17 73836706 73836730 -15667823 + (TG)n Simple_repeat Simple_repeat 2 25 0 1668 176 41 10 chr17 73836774 73837069 -15667484 + AluJo SINE Alu 1 304 -8 1551 187 41 39 chr17 73837109 73837385 -15667168 - MLT1A1 LTR MaLR 0 365 86 2779 116 21 19 chr17 73837385 73837816 -15666737 + MSTB1 LTR MaLR 1 432 0 1551 187 41 39 chr17 73837816 73837903 -15666650 - MLT1A1 LTR MaLR -279 86 1 319 274 156 67 chr17 73840004 73840183 -15664370 + L1ME4a LINE L1 5392 5586 -535 385 169 32 10 chr17 73840199 73840293 -15664260 - LTR50 LTR ERVL 0 795 687 658 240 8 12 chr17 73840698 73840871 -15663682 - LTR41 LTR ERVL -610 185 1 347 327 128 0 chr17 73840873 73841029 -15663524 + L1ME4a LINE L1 5616 5791 -330 2107 125 0 29 chr17 73841184 73841496 -15663057 - AluY SINE Alu -8 303 1 202 272 86 25 chr17 73841496 73841572 -15662981 + L2 LINE L2 3228 3308 -5 303 314 29 0 chr17 73841572 73841674 -15662879 - MLT1D LTR MaLR 0 467 363 * 387 201 45 60 chr17 73841670 73841804 -15662749 - MLT1D LTR MaLR -326 179 48 358 215 67 44 chr17 73841872 73842007 -15662546 + L1ME4a LINE L1 5984 6121 0 243 0 0 0 chr17 73842643 73842670 -15661883 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 27 29 0 0 chr17 73842780 73842814 -15661739 + AT_rich Low_complexity Low_complexity 1 34 0 1132 222 5 0 chr17 73842979 73843200 -15661353 - MER58A DNA MER1_type 0 224 3 205 324 77 47 chr17 73844373 73844543 -15660010 + L2 LINE L2 2035 2209 -1105 897 205 36 112 chr17 73844640 73844996 -15659557 - MLT1J LTR MaLR -88 423 95 471 352 143 16 chr17 73845086 73845631 -15658922 + L2 LINE L2 2230 2843 -471 397 322 47 34 chr17 73846204 73846437 -15658116 - MLT1L LTR MaLR -225 390 155 2437 88 68 3 chr17 73846874 73847226 -15657327 + THE1C LTR MaLR 1 375 0 2256 123 10 0 chr17 73848574 73848883 -15655670 + AluSx SINE Alu 1 312 0 216 0 0 0 chr17 73849357 73849381 -15655172 + (T)n Simple_repeat Simple_repeat 1 24 0 263 330 50 0 chr17 73849422 73849522 -15655031 - L2 LINE L2 -12 3301 3197 270 0 0 0 chr17 73849985 73850015 -15654538 + (TG)n Simple_repeat Simple_repeat 1 30 0 228 67 0 0 chr17 73850015 73850045 -15654508 + (GA)n Simple_repeat Simple_repeat 2 31 0 2203 231 27 13 chr17 73850181 73850732 -15653821 - MER119 DNA MER1_type 0 583 25 207 229 38 19 chr17 73850949 73851054 -15653499 + (TA)n Simple_repeat Simple_repeat 1 107 0 368 130 14 0 chr17 73851056 73851125 -15653428 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 232 418 52 0 chr17 73851225 73851378 -15653175 - L2 LINE L2 -2090 1224 1064 1484 284 69 18 chr17 73851774 73852338 -15652215 + MLT1E LTR MaLR 1 593 0 319 178 47 149 chr17 73852354 73852537 -15652016 - MER104 DNA Tc2 -17 163 1 1964 144 3 10 chr17 73852576 73852882 -15651671 - AluJb SINE Alu -8 304 1 1131 53 0 0 chr17 73852959 73853091 -15651462 - AluY SINE Alu -179 132 1 316 315 0 8 chr17 73853209 73853336 -15651217 - L1MC4a LINE L1 -1862 5946 5821 2318 100 0 0 chr17 73853405 73853695 -15650858 - AluSg SINE Alu -20 290 1 411 98 0 0 chr17 73853826 73853887 -15650666 + (TG)n Simple_repeat Simple_repeat 2 62 0 258 163 0 0 chr17 73854151 73854200 -15650353 - HAL1 LINE L1 -1487 1020 972 255 119 0 0 chr17 73854208 73854250 -15650303 - HAL1 LINE L1 -1490 1017 976 332 224 10 0 chr17 73854277 73854375 -15650178 + CT-rich Low_complexity Low_complexity 1 99 0 387 309 71 71 chr17 73854823 73855189 -15649364 - HAL1 LINE L1 -2067 440 75 688 248 130 0 chr17 73855189 73855405 -15649148 + MIR SINE MIR 17 261 -1 1526 102 8 38 chr17 73855495 73855730 -15648823 - MER30 DNA MER1_type -2 228 1 328 352 21 7 chr17 73855752 73855897 -15648656 + L2 LINE L2 3167 3313 0 935 308 16 4 chr17 73855932 73856185 -15648368 + MIR SINE MIR 1 256 -6 1823 163 0 16 chr17 73856323 73856629 -15647924 - AluJb SINE Alu -11 301 1 700 258 97 18 chr17 73856661 73856878 -15647675 + MIR SINE MIR 28 261 -1 265 411 6 0 chr17 73856878 73857041 -15647512 + (ATG)n Simple_repeat Simple_repeat 3 166 0 330 351 33 10 chr17 73857061 73857240 -15647313 + MIR SINE MIR 13 201 -61 317 151 233 0 chr17 73857249 73857322 -15647231 + HsTC2 DNA Tc2 19 108 -1790 508 125 0 0 chr17 73857340 73857420 -15647133 - L1MA1 LINE L1 0 6302 6223 528 219 79 33 chr17 73857435 73857650 -15646903 + HsTC2 DNA Tc2 1669 1893 -5 1196 244 62 43 chr17 73857758 73857921 -15646632 + MLT1F LTR MaLR 1 159 -383 2157 88 37 0 chr17 73857921 73858215 -15646338 - AluSp SINE Alu -8 305 1 1196 244 62 43 chr17 73858215 73858474 -15646079 + MLT1F LTR MaLR 159 431 -111 502 122 11 0 chr17 73858482 73858572 -15645981 + L1MA4A LINE L1 6208 6298 -5 2266 105 13 10 chr17 73858695 73859000 -15645553 + AluSg SINE Alu 1 306 -4 297 0 0 0 chr17 73859086 73859119 -15645434 + (TG)n Simple_repeat Simple_repeat 2 34 0 567 294 8 42 chr17 73859519 73859678 -15644875 - HAL1 LINE L1 -10 2497 2349 2292 91 10 0 chr17 73859678 73859974 -15644579 - AluSq SINE Alu -14 299 1 567 294 8 42 chr17 73859974 73860076 -15644477 - HAL1 LINE L1 -158 2349 2245 436 314 26 67 chr17 73860076 73860105 -15644448 - LTR16C LTR ERVL 0 491 462 891 162 27 11 chr17 73860105 73860290 -15644263 - MER53 DNA DNA 0 189 2 436 314 26 67 chr17 73860290 73860325 -15644228 - LTR16C LTR ERVL -29 462 427 1915 133 67 56 chr17 73860325 73860609 -15643944 + THE1B LTR MaLR 1 291 -73 2045 132 0 3 chr17 73860609 73860905 -15643648 - AluSq SINE Alu -14 299 5 1915 133 67 56 chr17 73860905 73860980 -15643573 + THE1B LTR MaLR 291 364 0 436 314 26 67 chr17 73860980 73861226 -15643327 - LTR16C LTR ERVL -64 427 193 794 302 79 18 chr17 73861294 73861748 -15642805 - HAL1 LINE L1 -337 2170 1689 2054 92 12 129 chr17 73861748 73862173 -15642380 + THE1C LTR MaLR 1 375 0 1179 241 86 125 chr17 73862173 73863331 -15641222 - HAL1 LINE L1 -814 1693 581 1209 179 125 4 chr17 73863369 73863609 -15640944 - AluJb SINE Alu -43 269 1 282 321 43 6 chr17 73863647 73863809 -15640744 - L1ME LINE L1 -268 5853 5684 23 33 0 0 chr17 73864158 73864188 -15640365 + AT_rich Low_complexity Low_complexity 1 30 0 2076 124 47 44 chr17 73864494 73864857 -15639696 - THE1B LTR MaLR 0 364 1 2197 108 0 0 chr17 73864908 73865195 -15639358 - AluSx SINE Alu -8 304 18 311 250 117 48 chr17 73865195 73865346 -15639207 - L1MC/D LINE L1 -2014 5794 5626 4395 70 0 0 chr17 73865346 73865899 -15638654 + MER41A LTR ERV1 1 553 -1 311 250 117 48 chr17 73865899 73865935 -15638618 - L1MC/D LINE L1 -2182 5626 5594 220 98 37 61 chr17 73865997 73866079 -15638474 + (TTAAA)n Simple_repeat Simple_repeat 3 82 0 310 87 0 0 chr17 73866089 73866135 -15638418 - MER106B DNA MER1_type -908 151 106 210 317 49 0 chr17 73866916 73866998 -15637555 + MIR SINE MIR 41 126 -82 776 239 61 80 chr17 73867572 73867687 -15636866 - MIR SINE MIR -2 260 144 2354 112 0 0 chr17 73867687 73867990 -15636563 - AluSx SINE Alu -9 303 1 776 239 61 80 chr17 73867990 73868137 -15636416 - MIR SINE MIR -118 144 3 408 261 183 13 chr17 73868232 73868385 -15636168 - MER5A DNA MER1_type -1 188 10 476 289 84 42 chr17 73870068 73870307 -15634246 + MIR SINE MIR 13 261 -1 267 287 74 41 chr17 73871482 73871820 -15632733 + L1ME3 LINE L1 1864 2212 -4184 1955 176 10 23 chr17 73871859 73872245 -15632308 + MLT1B LTR MaLR 10 390 0 712 309 109 9 chr17 73872255 73872890 -15631663 + L1ME3 LINE L1 2199 2896 -3319 * 1528 218 51 34 chr17 73872888 73873486 -15631067 + L1ME1 LINE L1 4905 5526 -652 601 141 0 0 chr17 73873487 73873579 -15630974 + AluS SINE Alu 1 92 -220 810 123 31 8 chr17 73873584 73873714 -15630839 + AluSx SINE Alu 58 190 -122 3088 124 4 32 chr17 73873789 73874290 -15630263 - LTR22B LTR ERVK -4 488 2 1000 86 0 0 chr17 73874292 73874420 -15630133 + AluSp/q SINE Alu 178 305 -8 1621 235 87 23 chr17 73874470 73875036 -15629517 + L1ME1 LINE L1 5547 6148 -18 665 296 73 19 chr17 73875081 73875271 -15629282 + L1ME3 LINE L1 2931 3109 -3106 1838 152 61 25 chr17 73875271 73875633 -15628920 + THE1C LTR MaLR 1 375 0 665 296 73 19 chr17 73875633 73875909 -15628644 + L1ME3 LINE L1 3109 3422 -2793 618 271 77 19 chr17 73875915 73876017 -15628536 + L1ME3 LINE L1 3318 3413 -2802 1486 176 44 93 chr17 73876017 73876246 -15628307 + MLT1B LTR MaLR 1 203 -187 2308 122 0 0 chr17 73876246 73876550 -15628003 + AluSx SINE Alu 1 304 -8 1486 176 44 93 chr17 73876550 73876730 -15627823 + MLT1B LTR MaLR 203 390 0 618 271 77 19 chr17 73876730 73876993 -15627560 + L1ME3 LINE L1 3413 3704 -2511 1680 254 52 25 chr17 73877018 73877580 -15626973 + L1ME3 LINE L1 5332 5916 -323 1773 173 10 10 chr17 73877580 73877869 -15626684 + AluJo SINE Alu 1 289 -23 1680 254 52 25 chr17 73877869 73877956 -15626597 + L1ME3 LINE L1 5916 5999 -240 350 276 59 53 chr17 73878017 73878169 -15626384 + L1ME3 LINE L1 6002 6154 -77 440 200 9 0 chr17 73878334 73878444 -15626109 + (TCCA)n Simple_repeat Simple_repeat 4 114 0 2104 149 33 0 chr17 73878792 73879127 -15625426 + MER7A DNA MER2_type 1 344 -2 428 302 41 35 chr17 73879131 73879446 -15625107 + L1ME4a LINE L1 5603 5919 -202 26 30 0 0 chr17 73879715 73879748 -15624805 + AT_rich Low_complexity Low_complexity 1 33 0 369 252 36 18 chr17 73880001 73880112 -15624441 + MIR SINE MIR 85 197 -65 5419 30 3 0 chr17 73880161 73880850 -15623703 - L1PA3 LINE L1 -2131 4015 3325 11846 24 1 0 chr17 73880850 73883028 -15621525 + L1PA3 LINE L1 3998 6176 0 210 37 0 0 chr17 73884470 73884497 -15620056 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 342 201 15 0 chr17 73884562 73884637 -15619916 - MIR SINE MIR -61 147 79 22 56 0 0 chr17 73885139 73885175 -15619378 + AT_rich Low_complexity Low_complexity 1 36 0 307 289 128 21 chr17 73885343 73885530 -15619023 - L1ME4a LINE L1 -65 6056 5850 303 269 14 113 chr17 73886086 73886193 -15618360 - L2 LINE L2 0 3313 3222 1867 159 14 0 chr17 73886193 73886489 -15618064 + AluJb SINE Alu 1 300 -12 303 269 14 113 chr17 73886489 73886522 -15618031 - L2 LINE L2 -91 3222 3187 2393 153 0 0 chr17 73886706 73887053 -15617500 - MER7A DNA MER2_type -1 345 1 1131 110 7 0 chr17 73887156 73887311 -15617242 + L1PA11 LINE L1 6019 6174 0 564 270 122 34 chr17 73887357 73887824 -15616729 - L1ME4a LINE L1 -749 5397 4890 292 288 14 0 chr17 73888338 73888411 -15616142 - MER5A DNA MER1_type -53 136 63 704 304 165 32 chr17 73889613 73890068 -15614485 + L2 LINE L2 2516 2909 -404 1427 234 33 40 chr17 73890068 73890466 -15614087 + MLT2C1 LTR ERVL 1 395 -2 704 304 165 32 chr17 73890466 73890708 -15613845 + L2 LINE L2 2909 3313 0 2254 97 3 7 chr17 73890776 73891076 -15613477 + AluSq SINE Alu 1 299 -14 401 297 42 57 chr17 73891150 73891342 -15613211 + L1MC4a LINE L1 5727 5917 -204 2360 132 13 42 chr17 73892090 73892271 -15612282 + MLT1C LTR MaLR 3 95 -301 1496 126 9 144 chr17 73892271 73892605 -15611948 + AluJb SINE Alu 1 289 -23 2360 132 13 42 chr17 73892605 73892848 -15611705 + MLT1C LTR MaLR 95 344 -52 1230 136 25 5 chr17 73892876 73893075 -15611478 - L1PA14 LINE L1 -1 6160 5958 * 5888 78 17 0 chr17 73893043 73893828 -15610725 - L1PA14 LINE L1 -108 6053 5256 474 146 12 12 chr17 73893828 73893910 -15610643 + MLT1C LTR MaLR 385 466 -1 4152 124 22 16 chr17 73894073 73894718 -15609835 - L1MA6 LINE L1 -4 6296 5648 2104 144 24 11 chr17 73894719 73894896 -15609657 + L1M2 LINE L1 5088 5261 -1039 1695 198 17 0 chr17 73894896 73895194 -15609359 + AluJo SINE Alu 1 303 -9 2104 144 24 11 chr17 73895194 73895572 -15608981 + L1M2 LINE L1 5261 5650 -650 23 68 0 0 chr17 73896191 73896235 -15608318 + AT_rich Low_complexity Low_complexity 1 44 0 2418 73 0 29 chr17 73896731 73897046 -15607507 + AluSx SINE Alu 1 306 -6 197 169 119 51 chr17 73897156 73897215 -15607338 + L2 LINE L2 3208 3270 -2 937 250 44 40 chr17 73898306 73898602 -15605951 + L1ME1 LINE L1 5824 6120 -46 263 173 19 0 chr17 73898604 73898656 -15605897 - L1M4 LINE L1 -3783 2363 2311 281 190 0 0 chr17 73898657 73898715 -15605838 + L1MA10 LINE L1 6265 6322 -12 236 329 26 26 chr17 73898752 73898828 -15605725 - MIR SINE MIR -174 88 13 435 318 17 6 chr17 73898965 73899138 -15605415 + L1ME4a LINE L1 5562 5736 -385 335 240 38 77 chr17 73899244 73899427 -15605126 + L1ME4a LINE L1 5944 6119 -2 2042 122 77 19 chr17 73901090 73901509 -15603044 - MER61D LTR ERV1 0 501 3 1926 188 22 14 chr17 73902907 73903269 -15601284 - MLT1A1 LTR MaLR 0 365 1 319 221 21 63 chr17 73903750 73903845 -15600708 - MIR SINE MIR -75 133 43 2275 113 7 0 chr17 73904622 73904932 -15599621 - AluSx SINE Alu 0 312 1 275 26 51 0 chr17 73905200 73905239 -15599314 + (TAATG)n Simple_repeat Simple_repeat 1 41 0 192 350 0 17 chr17 73905664 73905724 -15598829 + L2 LINE L2 3213 3271 -1 2362 88 0 7 chr17 73906384 73906690 -15597863 - AluY SINE Alu -7 304 1 428 302 83 30 chr17 73907249 73907418 -15597135 + MER5B DNA MER1_type 1 178 0 189 299 104 26 chr17 73907707 73907784 -15596769 + L2 LINE L2 3210 3292 -21 303 164 0 0 chr17 73907841 73907896 -15596657 - MIR SINE MIR -70 192 138 1448 176 39 4 chr17 73907909 73908165 -15596388 + MLT1E1 LTR MaLR 7 271 -383 780 178 15 7 chr17 73908247 73908382 -15596171 + MLT1E1 LTR MaLR 519 654 0 247 244 35 35 chr17 73908398 73908484 -15596069 - MIR SINE MIR -143 119 34 2397 89 0 13 chr17 73909031 73909345 -15595208 - AluY SINE Alu -1 310 1 458 242 10 0 chr17 73909678 73909777 -15594776 + MIR SINE MIR 54 153 -109 458 242 106 57 chr17 73910005 73910269 -15594284 + MLT1J LTR MaLR 232 508 -3 2312 85 3 0 chr17 73910695 73910989 -15593564 - THE1B LTR MaLR -69 295 1 640 340 73 45 chr17 73910997 73911506 -15593047 + L3 LINE CR1 989 1511 -66 229 316 51 71 chr17 73911598 73911794 -15592759 - MIR SINE MIR -5 257 66 192 40 0 0 chr17 73912237 73912262 -15592291 + (CA)n Simple_repeat Simple_repeat 1 25 0 446 266 0 0 chr17 73912902 73912996 -15591557 + L2 LINE L2 3220 3313 0 2358 84 3 10 chr17 73914646 73914955 -15589598 - AluSp SINE Alu -6 307 1 1671 132 69 50 chr17 73915431 73915734 -15588819 + AluJo SINE Alu 1 309 -3 370 375 7 14 chr17 73915990 73916134 -15588419 + L2 LINE L2 3117 3259 -13 243 61 0 0 chr17 73916134 73916167 -15588386 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 1993 123 0 58 chr17 73916261 73916586 -15587967 - AluSx SINE Alu -6 306 1 296 289 117 32 chr17 73917852 73918169 -15586384 - L2 LINE L2 -4 3268 2923 863 337 51 38 chr17 73918260 73918865 -15585688 - L2 LINE L2 -382 2932 2320 486 321 11 11 chr17 73919749 73919933 -15584620 + MIR SINE MIR 32 215 -47 236 280 34 42 chr17 73920218 73920336 -15584217 + Charlie8 DNA MER1_type 95 211 -2206 406 295 53 37 chr17 73920417 73920607 -15583946 + MIR SINE MIR 70 262 0 2122 133 23 0 chr17 73921226 73921528 -15583025 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr17 73922640 73922674 -15581879 + AT_rich Low_complexity Low_complexity 1 34 0 303 283 45 73 chr17 73924187 73924434 -15580119 - L1M4 LINE L1 -3222 2924 2685 34 55 0 0 chr17 73924967 73925022 -15579531 + AT_rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr17 73925068 73925096 -15579457 + AT_rich Low_complexity Low_complexity 1 28 0 2423 73 0 7 chr17 73925325 73925625 -15578928 + AluY SINE Alu 1 298 -13 191 284 90 113 chr17 73926225 73926447 -15578106 + L3b LINE CR1 1155 1371 -212 234 281 0 0 chr17 73926777 73926834 -15577719 - L2 LINE L2 0 3313 3257 2388 74 7 3 chr17 73927176 73927473 -15577080 - AluY SINE Alu -13 298 1 281 258 62 0 chr17 73927874 73928002 -15576551 + (TA)n Simple_repeat Simple_repeat 1 136 0 201 356 89 7 chr17 73928012 73928158 -15576395 - MIR SINE MIR -73 189 32 431 279 12 43 chr17 73928241 73928402 -15576151 + MIR SINE MIR 63 218 -44 1990 123 9 59 chr17 73928446 73928770 -15575783 + AluSg SINE Alu 1 308 -2 807 264 30 0 chr17 73929068 73929269 -15575284 + MIR SINE MIR 7 213 -49 308 297 94 8 chr17 73929355 73929483 -15575070 - MIR SINE MIR -118 144 6 1576 175 17 14 chr17 73929869 73930166 -15574387 + AluJb SINE Alu 1 298 -14 2453 150 30 48 chr17 73931572 73932013 -15572540 - Tigger2a DNA MER2_type 0 434 2 1922 142 3 16 chr17 73933173 73933489 -15571064 + AluJb SINE Alu 1 312 0 7001 163 21 33 chr17 73933967 73934321 -15570232 + L1P4 LINE L1 3908 4265 -1900 2023 80 8 0 chr17 73934321 73934572 -15569981 + AluSp SINE Alu 1 253 -60 7001 163 21 33 chr17 73934572 73936154 -15568399 + L1P4 LINE L1 4265 5819 -346 3370 171 25 128 chr17 73936283 73936843 -15567710 + MER54B LTR ERVL 5 453 -448 1687 129 96 11 chr17 73936843 73937115 -15567438 + AluY SINE Alu 1 295 -16 3370 171 25 128 chr17 73937115 73937522 -15567031 + MER54B LTR ERVL 453 901 0 1916 154 3 3 chr17 73938069 73938362 -15566191 - AluSx SINE Alu -17 295 3 2653 115 3 21 chr17 73938609 73938991 -15565562 - THE1C LTR MaLR 0 375 1 4238 143 44 13 chr17 73939521 73940226 -15564327 + LTR8A LTR ERV1 1 727 0 1281 249 33 51 chr17 73940381 73940834 -15563719 + MLT2C2 LTR ERVL 20 464 0 2637 194 98 65 chr17 73941010 73941765 -15562788 + LTR19C LTR ERV1 1 779 0 21 36 0 0 chr17 73942891 73942919 -15561634 + AT_rich Low_complexity Low_complexity 1 28 0 372 318 24 47 chr17 73942949 73943066 -15561487 + L1M4 LINE L1 2209 2320 -3826 1768 164 0 33 chr17 73943066 73943370 -15561183 + AluJb SINE Alu 1 294 -18 372 318 24 47 chr17 73943370 73943463 -15561090 + L1M4 LINE L1 2320 2414 -3732 412 270 13 57 chr17 73943549 73943708 -15560845 + Charlie8 DNA MER1_type 70 221 -2196 1227 243 117 45 chr17 73943745 73944584 -15559969 + L1MDa LINE L1 1661 4118 -2422 917 188 23 6 chr17 73944584 73944760 -15559793 + MER58A DNA MER1_type 40 218 -6 849 276 92 46 chr17 73945933 73946648 -15557905 + L1ME3 LINE L1 1236 1983 -4738 2027 247 54 33 chr17 73946704 73947462 -15557091 + L1ME3 LINE L1 4050 4823 -1717 1041 192 163 97 chr17 73947505 73947770 -15556783 - MLT1D LTR MaLR 0 505 259 510 17 0 0 chr17 73947770 73947829 -15556724 + (TG)n Simple_repeat Simple_repeat 1 59 0 1041 192 163 97 chr17 73947829 73947975 -15556578 - MLT1D LTR MaLR -246 259 59 4997 136 36 38 chr17 73947975 73948801 -15555752 + LTR1B LTR ERV1 2 826 0 1041 192 163 97 chr17 73948801 73948841 -15555712 - MLT1D LTR MaLR -446 59 23 1675 246 123 10 chr17 73948878 73949790 -15554763 + L1ME3 LINE L1 4871 5884 -680 3262 133 49 54 chr17 73949862 73950457 -15554096 + LTR36 LTR ERV1 19 610 -1 1067 275 105 17 chr17 73950468 73950933 -15553620 + L1ME3 LINE L1 5898 6403 -153 1041 126 0 0 chr17 73950945 73951088 -15553465 + FLAM_C SINE Alu 1 143 0 239 305 12 24 chr17 73951098 73951180 -15553373 + L1ME3 LINE L1 6452 6532 -24 316 263 21 21 chr17 73951207 73951302 -15553251 + MARNA DNA Mariner 346 440 -146 758 204 61 25 chr17 73951400 73951596 -15552957 - MER105 DNA DNA -1 203 1 4299 176 11 51 chr17 73952249 73953067 -15551486 + LTR1 LTR ERV1 1 785 0 294 359 153 0 chr17 73953721 73953852 -15550701 - L2 LINE L2 -6 3266 3116 2442 83 0 10 chr17 73953891 73954205 -15550348 + AluY SINE Alu 1 311 0 687 202 0 8 chr17 73954386 73954510 -15550043 + FLAM_A SINE Alu 4 126 -7 204 309 73 0 chr17 73955445 73955500 -15549053 - L2 LINE L2 -9 3304 3246 676 314 85 16 chr17 73955680 73955998 -15548555 - L2 LINE L2 -424 2890 2551 5317 77 9 9 chr17 73956171 73956858 -15547695 - L1PA10 LINE L1 0 6168 5482 227 355 0 0 chr17 73956858 73956934 -15547619 - MIR SINE MIR -99 109 34 421 290 48 27 chr17 73957720 73957906 -15546647 + MIR SINE MIR 72 261 -1 2132 94 3 29 chr17 73957978 73958285 -15546268 - AluSg SINE Alu -11 299 1 842 288 19 23 chr17 73959501 73959758 -15544795 - MIR SINE MIR 0 262 7 2510 174 2 2 chr17 73959802 73960205 -15544348 - MER57A LTR ERV1 0 403 1 180 0 0 0 chr17 73960390 73960410 -15544143 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2510 166 5 47 chr17 73960414 73960654 -15543899 - L1PA16 LINE L1 -10 6156 5942 2040 104 3 20 chr17 73960654 73960951 -15543602 - AluSp SINE Alu -21 292 1 2510 166 5 47 chr17 73960951 73961157 -15543396 - L1PA16 LINE L1 -224 5942 5729 180 97 0 0 chr17 73961280 73961311 -15543242 + (TTAG)n Simple_repeat Simple_repeat 2 32 0 2062 120 0 7 chr17 73961687 73961978 -15542575 + AluSx SINE Alu 14 302 -10 627 268 82 11 chr17 73962001 73962184 -15542369 + MER63A DNA MER1_type 4 199 -11 1327 204 91 32 chr17 73962469 73962953 -15541600 + MLT1F1 LTR MaLR 11 567 0 281 299 0 13 chr17 73963093 73963109 -15541444 + CT-rich Low_complexity Low_complexity 3 18 -60 2229 130 72 23 chr17 73963109 73963456 -15541097 - THE1B LTR MaLR 0 364 1 281 299 0 13 chr17 73963456 73963516 -15541037 + CT-rich Low_complexity Low_complexity 18 78 0 299 287 96 29 chr17 73963593 73963729 -15540824 + MIR SINE MIR 45 189 -73 485 256 117 3 chr17 73963752 73963930 -15540623 + MIR SINE MIR 50 249 -13 194 262 9 140 chr17 73964380 73964487 -15540066 - L2 LINE L2 -181 3091 2999 6109 76 5 1 chr17 73965302 73966082 -15538471 + L1PA10 LINE L1 5386 6168 0 262 268 54 45 chr17 73966615 73966727 -15537826 + MER103 DNA DNA 8 120 -46 2163 158 39 23 chr17 73967920 73968307 -15536246 - MLT2C1 LTR ERVL -3 394 2 2172 59 3 21 chr17 73968311 73968634 -15535919 + AluY SINE Alu 1 318 0 813 204 0 64 chr17 73969217 73969389 -15535164 - FRAM SINE Alu -12 164 4 1824 148 0 46 chr17 73970191 73970496 -15534057 - AluJo SINE Alu -21 291 1 698 176 15 59 chr17 73970497 73970615 -15533938 + Charlie5 DNA MER1_type 2391 2498 -87 1703 147 16 32 chr17 73970615 73970927 -15533626 - AluJo SINE Alu -5 307 1 698 176 15 59 chr17 73970927 73971012 -15533541 + Charlie5 DNA MER1_type 2498 2585 0 1777 146 68 10 chr17 73971670 73971965 -15532588 - AluJb SINE Alu 0 312 1 785 299 76 40 chr17 73972703 73973057 -15531496 - L2 LINE L2 0 3313 2947 1066 255 29 104 chr17 73973083 73973238 -15531315 - L2 LINE L2 -701 2613 2448 2055 138 3 3 chr17 73973238 73973543 -15531010 + AluSx SINE Alu 5 309 -3 1066 255 29 104 chr17 73973543 73973838 -15530715 - L2 LINE L2 -866 2448 2197 1325 189 26 15 chr17 73973963 73974229 -15530324 - MSTB1 LTR MaLR 0 432 164 564 99 0 12 chr17 73974229 73974310 -15530243 - MADE1 DNA Mariner 0 80 1 503 273 47 17 chr17 73974316 73974488 -15530065 - MSTB1 LTR MaLR -280 177 1 512 245 68 37 chr17 73974573 73974736 -15529817 + MIR SINE MIR 89 256 -6 917 210 82 9 chr17 73975035 73975254 -15529299 - MIR SINE MIR -1 261 27 2035 77 57 20 chr17 73975290 73975590 -15528963 - AluY SINE Alu 0 311 1 2054 130 6 13 chr17 73975870 73976232 -15528321 + AluSq SINE Alu 1 360 0 270 328 15 23 chr17 73976434 73976565 -15527988 + MIR3 SINE MIR 3 132 -76 2025 136 0 16 chr17 73976868 73977177 -15527376 - AluSx SINE Alu -8 304 1 252 0 0 0 chr17 73977187 73977215 -15527338 + (T)n Simple_repeat Simple_repeat 1 28 0 2130 99 7 17 chr17 73977738 73978040 -15526513 - AluSx SINE Alu -13 299 1 7647 48 0 27 chr17 73978119 73979133 -15525420 - L1PA5 LINE L1 0 6154 5152 2204 49 4 0 chr17 73979422 73979688 -15524865 + AluY SINE Alu 44 310 -1 4032 62 4 16 chr17 73981088 73981604 -15522949 + L1PA8 LINE L1 5663 6172 0 7253 101 13 23 chr17 73981925 73982942 -15521611 + LTR13 LTR ERVK 1 1007 0 443 235 7 39 chr17 73983665 73983818 -15520735 + MER103 DNA DNA 3 150 -16 281 378 0 0 chr17 73985879 73985969 -15518584 - L3 LINE CR1 -7 1570 1481 426 318 20 0 chr17 73986163 73986311 -15518242 - MIR SINE MIR -13 249 99 330 300 8 39 chr17 73986587 73986717 -15517836 - L3 LINE CR1 -283 1294 1169 1047 160 0 11 chr17 73986719 73986921 -15517632 - AluJb SINE Alu 0 312 126 660 152 9 27 chr17 73987052 73987164 -15517389 - FLAM_C SINE Alu -32 111 2 266 364 74 0 chr17 73987283 73987404 -15517149 + L2 LINE L2 3143 3272 0 224 256 0 73 chr17 73987402 73987484 -15517069 + MIR SINE MIR 131 206 -56 * 466 336 32 75 chr17 73988119 73988372 -15516181 + MIR SINE MIR 8 249 -13 933 195 73 34 chr17 73988498 73988703 -15515850 - MER20 DNA MER1_type 0 219 7 21 0 0 0 chr17 73988795 73988816 -15515737 + AT_rich Low_complexity Low_complexity 1 21 0 28 91 0 0 chr17 73988873 73988950 -15515603 + AT_rich Low_complexity Low_complexity 1 77 0 387 287 78 58 chr17 73988996 73989254 -15515299 - L1M4 LINE L1 -1103 5043 4781 3404 196 37 50 chr17 73989350 73990596 -15513957 - L1MB7 LINE L1 -20 6164 4929 2185 113 0 43 chr17 73991223 73991549 -15513004 - AluSx SINE Alu 0 312 1 423 358 65 22 chr17 73993229 73993458 -15511095 - MIR SINE MIR -8 254 16 708 168 27 7 chr17 73994162 73994430 -15510123 + CT-rich Low_complexity Low_complexity 1 273 0 252 271 144 25 chr17 73994448 73994566 -15509987 + MIR SINE MIR 9 140 -122 3819 77 2 20 chr17 73996105 73996661 -15507892 - L1MA1 LINE L1 0 6302 5757 4737 136 9 10 chr17 73996661 73998070 -15506483 - L1M1 LINE L1 -501 5801 4393 358 287 10 10 chr17 73998996 73999097 -15505456 - MER81 DNA DNA -11 103 3 3343 132 7 21 chr17 73999326 73999894 -15504659 + L1PA16 LINE L1 5593 6152 -14 198 91 0 0 chr17 74000926 74000959 -15503594 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2000 124 0 13 chr17 74002243 74002541 -15502012 - AluSx SINE Alu -17 295 2 270 224 45 0 chr17 74003343 74003410 -15501143 + MER116 DNA Mariner 3 72 -8 827 146 0 20 chr17 74003439 74003590 -15500963 - LTR7 LTR ERV1 0 450 303 842 112 8 24 chr17 74003797 74003966 -15500587 - LTR7 LTR ERV1 -232 218 1 2793 111 8 37 chr17 74003966 74004480 -15500073 - HERVH LTR ERV1 0 7713 7215 * 3808 149 45 37 chr17 74004478 74005602 -15498951 - HERVH LTR ERV1 -6259 1454 1 753 199 58 24 chr17 74005602 74005808 -15498745 - LTR7 LTR ERV1 0 450 238 689 141 0 28 chr17 74005958 74006100 -15498453 - LTR7 LTR ERV1 -312 138 1 619 198 140 13 chr17 74006222 74006379 -15498174 + MER58C DNA MER1_type 35 211 -4 485 229 85 35 chr17 74006432 74006626 -15497927 - MIR SINE MIR -1 261 2 648 171 0 79 chr17 74006646 74006786 -15497767 + FLAM_C SINE Alu 15 143 0 238 299 13 13 chr17 74006856 74006933 -15497620 + MIR SINE MIR 48 124 -138 555 256 51 35 chr17 74006935 74007251 -15497302 + LTR37A LTR ERV1 106 426 0 231 261 180 9 chr17 74007604 74007715 -15496838 - MIR SINE MIR -13 249 120 2001 130 0 7 chr17 74008004 74008367 -15496186 + AluSg SINE Alu 1 361 0 198 103 0 0 chr17 74008568 74008597 -15495956 + (TA)n Simple_repeat Simple_repeat 1 29 0 209 200 0 0 chr17 74008734 74008774 -15495779 + (CAA)n Simple_repeat Simple_repeat 2 41 0 953 224 67 5 chr17 74009608 74009818 -15494735 - MER58A DNA MER1_type -1 223 1 466 259 14 41 chr17 74009866 74010013 -15494540 + MLT1J2 LTR MaLR 32 174 -276 650 182 47 18 chr17 74010061 74010231 -15494322 - LTR38 LTR ERV1 0 556 382 2136 102 0 7 chr17 74010257 74010540 -15494013 + AluSx SINE Alu 14 294 -18 762 255 106 87 chr17 74010568 74010761 -15493792 - LTR38B LTR ERV1 -166 444 256 2301 82 0 16 chr17 74010761 74011077 -15493476 - AluY SINE Alu 0 311 1 762 255 106 87 chr17 74011077 74011319 -15493234 - LTR38B LTR ERV1 -354 256 1 245 335 68 12 chr17 74011351 74011512 -15493041 + MLT1J2 LTR MaLR 272 441 -9 241 331 73 0 chr17 74011618 74011754 -15492799 - MLT1L LTR MaLR -50 565 420 1726 179 0 10 chr17 74012094 74012401 -15492152 + AluJb SINE Alu 1 304 -8 1838 125 70 29 chr17 74013544 74013889 -15490664 + MLT1C LTR MaLR 7 365 -102 939 201 13 91 chr17 74013962 74014163 -15490390 + MER70-int LTR ERVL 2453 2668 -2862 2259 79 0 10 chr17 74014163 74014455 -15490098 - AluY SINE Alu -22 289 1 939 201 13 91 chr17 74014455 74014594 -15489959 + MER70-int LTR ERVL 2668 3408 -2122 826 334 38 2 chr17 74014938 74015336 -15489217 + MER70-int LTR ERVL 2715 3126 -1897 312 237 32 11 chr17 74015447 74015540 -15489013 + MER70B LTR ERVL 471 565 -13 481 389 46 20 chr17 74015549 74015899 -15488654 - L1ME LINE L1 -5672 398 40 397 211 22 0 chr17 74017400 74017490 -15487063 + MER2 DNA MER2_type 1 92 -253 213 39 0 0 chr17 74018399 74018425 -15486128 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1830 106 0 0 chr17 74018428 74018663 -15485890 - AluSq SINE Alu -44 269 35 1817 139 111 24 chr17 74019559 74019939 -15484614 + MSTA LTR MaLR 1 413 -15 338 167 83 0 chr17 74019947 74020019 -15484534 - THE1C LTR MaLR -297 78 1 1049 260 58 25 chr17 74020192 74020696 -15483857 + MLT1E LTR MaLR 14 593 0 2594 144 19 30 chr17 74021810 74022339 -15482214 - L1MA8 LINE L1 0 6291 5769 1335 140 30 4 chr17 74022339 74022571 -15481982 - L1PA13 LINE L1 -13 6150 5909 723 124 0 0 chr17 74022571 74022684 -15481869 - L1MA8 LINE L1 -503 5788 5676 450 368 70 28 chr17 74023651 74024183 -15480370 + L2 LINE L2 346 899 -2415 211 85 43 0 chr17 74024289 74024336 -15480217 + T-rich Low_complexity Low_complexity 2 50 0 22 0 0 0 chr17 74024556 74024578 -15479975 + AT_rich Low_complexity Low_complexity 1 22 0 733 213 19 19 chr17 74024578 74024738 -15479815 - FRAM SINE Alu -3 163 4 454 275 49 49 chr17 74025189 74025227 -15479326 + L2 LINE L2 1673 1710 -1604 2162 107 7 10 chr17 74025227 74025527 -15479026 + AluSx SINE Alu 1 299 -13 454 275 49 49 chr17 74025527 74025732 -15478821 + L2 LINE L2 1709 1916 -1398 225 308 164 10 chr17 74027539 74027643 -15476910 - MLT1K LTR MaLR -466 122 3 213 143 20 41 chr17 74029019 74029068 -15475485 + MIR SINE MIR 39 86 -176 896 280 98 8 chr17 74029088 74029488 -15475065 + LTR16A1 LTR ERVL 22 457 0 676 313 19 29 chr17 74029678 74029991 -15474562 + HERV16 LTR ERVL 262 571 -4425 1178 349 37 21 chr17 74030291 74031419 -15473134 + HERV16 LTR ERVL 927 2186 -3429 815 328 62 30 chr17 74031416 74031819 -15472734 - HERV16 LTR ERVL -1962 3034 2619 * 1639 244 246 44 chr17 74031902 74032539 -15472014 + L2 LINE L2 808 1315 -1999 2012 99 57 3 chr17 74032539 74032861 -15471692 - AluSg SINE Alu 0 310 1 1639 244 246 44 chr17 74032861 74033239 -15471314 + L2 LINE L2 1315 2028 -1286 2249 115 0 0 chr17 74033337 74033633 -15470920 - AluSc SINE Alu -12 297 2 2393 196 30 34 chr17 74033645 74034237 -15470316 - L1MD3 LINE L1 0 7995 7406 475 224 10 0 chr17 74034240 74034338 -15470215 - MLT1F1 LTR MaLR -443 124 26 393 280 0 0 chr17 74034364 74034464 -15470089 - L1MD3 LINE L1 -736 7259 7160 250 169 17 0 chr17 74034481 74034540 -15470013 - Charlie2a DNA MER1_type -61 2801 2742 315 49 0 0 chr17 74034568 74034609 -15469944 + (TG)n Simple_repeat Simple_repeat 2 42 0 553 191 38 60 chr17 74034609 74034792 -15469761 - Charlie2a DNA MER1_type -1217 1645 1467 231 146 0 0 chr17 74034907 74034948 -15469605 + (T)n Simple_repeat Simple_repeat 1 41 0 23 33 0 0 chr17 74034966 74034996 -15469557 + AT_rich Low_complexity Low_complexity 1 30 0 2000 96 26 19 chr17 74035005 74035044 -15469509 - L1MA1 LINE L1 -6 6296 6259 2260 114 31 20 chr17 74035044 74035402 -15469151 + THE1B LTR MaLR 3 364 0 2000 96 26 19 chr17 74035402 74035675 -15468878 - L1MA1 LINE L1 -43 6259 5982 2346 55 7 3 chr17 74035679 74035971 -15468582 - AluY SINE Alu -18 293 1 1021 90 0 0 chr17 74035971 74036104 -15468449 - AluSc SINE Alu -176 133 1 4438 120 36 20 chr17 74036105 74037396 -15467157 - L1MA1 LINE L1 -316 5986 4674 25 0 0 0 chr17 74037467 74037492 -15467061 + AT_rich Low_complexity Low_complexity 1 25 0 611 275 59 13 chr17 74037492 74037728 -15466825 - Charlie2 DNA MER1_type -2594 268 22 294 296 0 0 chr17 74037816 74037924 -15466629 - Charlie2 DNA MER1_type -828 2034 1927 1417 251 53 11 chr17 74038158 74038705 -15465848 - Charlie2 DNA MER1_type -437 2425 1856 255 318 36 50 chr17 74038734 74038954 -15465599 - Charlie2 DNA MER1_type -2485 297 81 951 269 219 57 chr17 74039010 74039352 -15465201 + L2 LINE L2 2023 2308 -1005 1868 160 33 30 chr17 74039352 74039715 -15464838 + THE1B LTR MaLR 1 364 0 951 269 219 57 chr17 74039715 74040464 -15464089 + L2 LINE L2 2308 3307 -6 663 258 78 14 chr17 74041300 74041517 -15463036 + MIR SINE MIR 32 262 0 659 243 29 23 chr17 74041698 74041871 -15462682 + MIR SINE MIR 37 210 -52 380 105 0 116 chr17 74042497 74042605 -15461948 + L1PA5 LINE L1 6079 6154 0 588 138 0 59 chr17 74042805 74042957 -15461596 + (TTCC)n Simple_repeat Simple_repeat 1 143 0 1788 157 10 20 chr17 74042957 74043263 -15461290 - AluJb SINE Alu -9 303 1 588 341 78 44 chr17 74043560 74044381 -15460172 - L1MEd LINE L1 -738 1752 819 204 200 0 46 chr17 74045504 74045569 -15458984 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 276 222 33 56 chr17 74046174 74046264 -15458289 - L2 LINE L2 0 3272 3185 23 0 0 0 chr17 74046545 74046568 -15457985 + AT_rich Low_complexity Low_complexity 1 23 0 2082 113 7 7 chr17 74047576 74047860 -15456693 + AluSc SINE Alu 1 284 -25 662 196 68 7 chr17 74048185 74048333 -15456220 + MLT1B LTR MaLR 2 158 -232 426 169 48 0 chr17 74048333 74048416 -15456137 - FLAM_C SINE Alu -9 134 48 2339 85 41 44 chr17 74048930 74049295 -15455258 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr17 74049599 74049621 -15454932 + AT_rich Low_complexity Low_complexity 1 22 0 360 314 87 34 chr17 74049624 74049831 -15454722 + L1 LINE L1 3772 3989 -2157 283 143 0 0 chr17 74049842 74049891 -15454662 - AluSx SINE Alu -2 298 250 1781 145 0 18 chr17 74049892 74050168 -15454385 - AluSx SINE Alu -37 275 5 1069 210 66 43 chr17 74050208 74050238 -15454315 - MLT2C1 LTR ERVL -14 383 355 279 0 0 0 chr17 74050238 74050269 -15454284 + (CA)n Simple_repeat Simple_repeat 1 31 0 1069 210 66 43 chr17 74050269 74050585 -15453968 - MLT2C1 LTR ERVL -42 355 29 2137 134 0 10 chr17 74050919 74051233 -15453320 + AluSx SINE Alu 1 311 -1 15774 92 6 0 chr17 74052152 74055004 -15449549 + L1PA8A LINE L1 2989 5855 -276 233 304 0 54 chr17 74056052 74056144 -15448409 - MIR SINE MIR -4 258 172 183 80 0 0 chr17 74056562 74056587 -15447966 + (GA)n Simple_repeat Simple_repeat 2 26 0 199 349 30 30 chr17 74056700 74056832 -15447721 + L2 LINE L2 2968 3099 -173 633 261 222 36 chr17 74056919 74057418 -15447135 + MLT1L LTR MaLR 19 610 -5 665 181 5 103 chr17 74057440 74057644 -15446909 - MER3 DNA MER1_type -7 202 19 186 103 0 0 chr17 74058215 74058244 -15446309 + (CA)n Simple_repeat Simple_repeat 2 30 0 896 144 0 0 chr17 74058840 74058972 -15445581 + FLAM_C SINE Alu 1 132 -1 1809 141 52 6 chr17 74059662 74059988 -15444565 + L1MC1 LINE L1 5986 6326 -7 23 0 0 0 chr17 74062324 74062347 -15442206 + AT_rich Low_complexity Low_complexity 1 23 0 194 62 31 0 chr17 74062404 74062436 -15442117 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3386 77 9 0 chr17 74062899 74063355 -15441198 + L1PA10 LINE L1 5709 6168 0 24 0 0 0 chr17 74064915 74064939 -15439614 + AT_rich Low_complexity Low_complexity 1 24 0 1900 159 13 3 chr17 74065894 74066196 -15438357 - AluJo SINE Alu -7 305 1 2147 114 10 0 chr17 74066433 74066732 -15437821 + AluSq SINE Alu 1 302 -11 357 78 0 0 chr17 74067349 74067400 -15437153 + Tigger1 DNA MER2_type 370 420 -1998 810 336 126 0 chr17 74067404 74067776 -15436777 - L2 LINE L2 -642 2672 2254 458 123 27 0 chr17 74067918 74067991 -15436562 + AluSg/x SINE Alu 215 289 -20 13899 132 25 12 chr17 74068099 74070464 -15434089 + Tigger1 DNA MER2_type 24 2418 0 2231 68 68 7 chr17 74071037 74071332 -15433221 + AluSp SINE Alu 1 313 0 197 255 59 0 chr17 74072287 74072338 -15432215 - MIR SINE MIR -90 172 119 260 27 27 0 chr17 74073059 74073096 -15431457 + (CA)n Simple_repeat Simple_repeat 2 39 0 1277 277 65 24 chr17 74073234 74074446 -15430107 + L1MEc LINE L1 1552 2772 -3443 316 203 0 0 chr17 74074738 74074812 -15429741 + L1ME1 LINE L1 6090 6163 -3 7653 20 12 0 chr17 74075025 74076119 -15428434 - L1PA3 LINE L1 0 6155 5057 856 216 22 0 chr17 74076264 74076445 -15428108 - MER5A DNA MER1_type -1 188 4 328 287 72 14 chr17 74077183 74077341 -15427212 + MIR SINE MIR 12 183 -25 23 33 0 0 chr17 74078251 74078281 -15426272 + AT_rich Low_complexity Low_complexity 1 30 0 4074 172 40 23 chr17 74080376 74080458 -15424095 - L1MB1 LINE L1 -5 6163 6084 2636 175 42 4 chr17 74080458 74080933 -15423620 + LTR42 LTR ERVL 1 493 -2 4074 172 40 23 chr17 74080933 74081532 -15423021 - L1MB1 LINE L1 -84 6084 5461 1438 203 37 64 chr17 74081532 74081937 -15422616 - MSTD LTR MaLR -2 394 1 4074 172 40 23 chr17 74081937 74082134 -15422419 - L1MB1 LINE L1 -707 5461 5269 6353 125 58 41 chr17 74082136 74082401 -15422152 + Tigger3b DNA MER2_type 1 260 -2768 213 39 0 0 chr17 74082401 74082427 -15422126 + (CTATA)n Simple_repeat Simple_repeat 2 27 0 6353 125 58 41 chr17 74082427 74082522 -15422031 + Tigger3b DNA MER2_type 260 352 -2676 4810 21 9 0 chr17 74082522 74083088 -15421465 + L1PA2 LINE L1 5582 6152 -3 6353 125 58 41 chr17 74083088 74083937 -15420616 + Tigger3b DNA MER2_type 352 1231 0 2439 201 6 0 chr17 74083937 74084459 -15420094 - L1MB1 LINE L1 -878 5268 4744 184 303 180 0 chr17 74085347 74085436 -15419117 + MIR SINE MIR 49 153 -109 24 41 0 20 chr17 74087477 74087501 -15417052 + AT_rich Low_complexity Low_complexity 1 24 -24 1772 154 3 50 chr17 74087501 74087819 -15416734 - AluJb SINE Alu -9 303 1 24 41 0 20 chr17 74087819 74087843 -15416710 + AT_rich Low_complexity Low_complexity 24 48 0 389 310 109 55 chr17 74088506 74088928 -15415625 - L2 LINE L2 -1 3312 2868 274 266 0 0 chr17 74089949 74090013 -15414540 + MER52A LTR ERV1 1 64 -1691 618 291 0 0 chr17 74090039 74090180 -15414373 + MER52A LTR ERV1 1 141 -1614 6756 174 89 17 chr17 74090207 74091440 -15413113 + MER52A LTR ERV1 434 1755 0 395 320 93 13 chr17 74091776 74092001 -15412552 - MIR SINE MIR -18 244 2 1899 165 10 7 chr17 74096044 74096347 -15408206 - AluJb SINE Alu -7 305 2 22 70 0 0 chr17 74096355 74096398 -15408155 + AT_rich Low_complexity Low_complexity 1 43 0 605 337 76 44 chr17 74097034 74097533 -15407020 - L2 LINE L2 -800 2514 2000 2943 254 78 39 chr17 74098060 74099039 -15405514 - L1ME1 LINE L1 -11 6155 5102 2238 110 0 0 chr17 74099039 74099331 -15405222 - AluSx SINE Alu -20 292 1 2943 254 78 39 chr17 74099331 74099814 -15404739 - L1ME1 LINE L1 -1064 5102 4639 842 205 6 0 chr17 74101375 74101531 -15403022 + FRAM SINE Alu 1 156 -20 283 239 31 98 chr17 74101830 74101993 -15402560 - MER5B DNA MER1_type -3 175 24 453 156 0 0 chr17 74102067 74102163 -15402390 + CT-rich Low_complexity Low_complexity 3 98 0 1890 18 0 0 chr17 74102249 74102468 -15402085 - L1PA2 LINE L1 -1 6154 5936 6950 235 59 25 chr17 74103917 74104880 -15399673 + L1MB8 LINE L1 16 945 -6014 4111 181 15 4 chr17 74104880 74105604 -15398949 + MER44D DNA MER2_type 2 605 0 6950 235 59 25 chr17 74105604 74106760 -15397793 + L1MB8 LINE L1 945 2222 -4737 817 132 0 0 chr17 74106760 74106881 -15397672 + L1PB4 LINE L1 6034 6154 -2 6950 235 59 25 chr17 74106881 74107031 -15397522 + L1MB8 LINE L1 2222 2365 -4594 1054 221 70 53 chr17 74107538 74108141 -15396412 + L1MB8 LINE L1 2722 3335 -3622 2291 241 22 4 chr17 74108145 74108822 -15395731 + L1MB8 LINE L1 3474 4162 -2795 3583 183 27 43 chr17 74108968 74109130 -15395423 + L1MB8 LINE L1 6191 6354 -635 2320 77 0 13 chr17 74109130 74109430 -15395123 + AluSc SINE Alu 1 296 -13 3583 183 27 43 chr17 74109430 74110078 -15394475 + L1MB8 LINE L1 6354 6988 -1 1406 49 0 0 chr17 74111730 74111946 -15392607 + AluY SINE Alu 127 342 0 329 330 36 50 chr17 74112013 74112316 -15392237 + L1MCc LINE L1 109 407 -6016 552 277 56 40 chr17 74112653 74113278 -15391275 + L1MCc LINE L1 1129 1759 -4889 522 309 21 41 chr17 74115965 74116159 -15388394 - L2 LINE L2 -6 3307 3118 195 305 85 0 chr17 74116400 74116482 -15388071 + MIR SINE MIR 88 176 -86 848 272 5 18 chr17 74116817 74117041 -15387512 - MER58A DNA MER1_type -2 222 2 189 310 127 35 chr17 74117130 74117272 -15387281 - MIR SINE MIR -18 244 90 15356 152 46 7 chr17 74117664 74119338 -15385215 + L1MA3 LINE L1 15 1622 -6102 324 0 0 0 chr17 74119338 74119374 -15385179 + (CA)n Simple_repeat Simple_repeat 2 37 0 15356 152 46 7 chr17 74119374 74123814 -15380739 + L1MA3 LINE L1 1622 7508 -216 1073 97 87 15 chr17 74123942 74124137 -15380416 + L1MA3 LINE L1 7515 7723 -1 1995 54 105 7 chr17 74124591 74124867 -15379686 + AluY SINE Alu 1 303 -8 21 0 0 0 chr17 74126194 74126215 -15378338 + AT_rich Low_complexity Low_complexity 1 21 0 1838 127 8 4 chr17 74126255 74126523 -15378030 + AluSg SINE Alu 1 269 -41 482 70 0 0 chr17 74126624 74126695 -15377858 + AluSp/q SINE Alu 241 311 -2 659 213 121 10 chr17 74126701 74126908 -15377645 + MIR SINE MIR 33 262 0 267 271 0 0 chr17 74127597 74127656 -15376897 + MLT1H1 LTR MaLR 312 370 -185 2934 104 5 11 chr17 74127712 74128153 -15376400 + L1PA14 LINE L1 5721 6158 -3 5643 29 1 0 chr17 74128433 74129098 -15375455 + L1PA4 LINE L1 5489 6154 -1 182 222 0 0 chr17 74129906 74129942 -15374611 - MER5B DNA MER1_type -10 168 133 190 365 36 15 chr17 74130201 74130338 -15374215 + MIR SINE MIR 2 141 -121 22 35 0 0 chr17 74130617 74130646 -15373907 + AT_rich Low_complexity Low_complexity 1 29 0 1953 160 0 0 chr17 74130646 74130939 -15373614 - AluSx SINE Alu -19 293 1 2000 104 61 0 chr17 74131518 74131798 -15372755 + AluSp SINE Alu 1 297 -16 2205 109 3 10 chr17 74134414 74134717 -15369836 + AluSx SINE Alu 1 301 -11 213 391 54 0 chr17 74134729 74134821 -15369732 - L2 LINE L2 -27 3286 3190 321 283 30 20 chr17 74134913 74135012 -15369541 + MER5B DNA MER1_type 79 178 0 23 33 0 0 chr17 74136108 74136138 -15368415 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr17 74137223 74137250 -15367303 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 239 325 178 13 chr17 74137478 74137635 -15366918 + MIR SINE MIR 66 248 -14 325 295 90 24 chr17 74137986 74138152 -15366401 - MIR SINE MIR 0 262 86 228 67 0 0 chr17 74139198 74139228 -15365325 + (T)n Simple_repeat Simple_repeat 1 30 0 2386 72 0 0 chr17 74139370 74139662 -15364891 + AluY SINE Alu 1 292 -19 365 295 27 54 chr17 74141576 74141800 -15362753 - L1ME3 LINE L1 -278 5884 5667 402 244 17 42 chr17 74141801 74141920 -15362633 - MLT1J2 LTR MaLR 0 450 335 411 289 54 16 chr17 74142217 74142482 -15362071 - L1M2 LINE L1 -652 5518 5260 1977 119 26 33 chr17 74142526 74142704 -15361849 - AluSx SINE Alu -12 300 123 279 0 0 0 chr17 74142704 74142735 -15361818 + (TG)n Simple_repeat Simple_repeat 2 32 0 1977 119 26 33 chr17 74142735 74142858 -15361695 - AluSx SINE Alu -189 123 1 2110 213 55 53 chr17 74142961 74142982 -15361571 - L1P5 LINE L1 -340 5816 5797 261 0 0 0 chr17 74142982 74143011 -15361542 + (TA)n Simple_repeat Simple_repeat 2 30 0 2110 213 55 53 chr17 74143011 74144076 -15360477 - L1P5 LINE L1 -359 5797 4732 190 220 11 11 chr17 74144155 74144246 -15360307 + (TA)n Simple_repeat Simple_repeat 1 91 0 209 304 29 0 chr17 74145256 74145325 -15359228 + MIR SINE MIR 82 152 -110 22 35 0 0 chr17 74145327 74145356 -15359197 + AT_rich Low_complexity Low_complexity 1 29 0 427 138 75 0 chr17 74146058 74146138 -15358415 - L1MB7 LINE L1 -19 6165 6080 566 276 138 61 chr17 74146742 74147285 -15357268 + MLT1K LTR MaLR 4 588 0 325 139 41 0 chr17 74147297 74147365 -15357188 - L1MA4 LINE L1 -185 6115 6041 918 150 7 7 chr17 74149730 74149883 -15354670 + LTR41 LTR ERVL 1 153 -620 317 246 8 42 chr17 74150261 74150379 -15354174 + LTR41 LTR ERVL 654 767 -6 1372 222 84 33 chr17 74150967 74151353 -15353200 + L1MCc LINE L1 19 384 -6039 3401 66 0 2 chr17 74151353 74151795 -15352758 + L1PA8 LINE L1 5714 6154 -18 465 66 0 0 chr17 74151795 74151856 -15352697 + (TA)n Simple_repeat Simple_repeat 1 61 0 1372 222 84 33 chr17 74151856 74151896 -15352657 + L1MCc LINE L1 383 468 -5955 775 237 69 74 chr17 74152293 74152643 -15351910 + L1MCc LINE L1 720 1067 -5356 213 159 0 0 chr17 74153256 74153300 -15351253 + (TG)n Simple_repeat Simple_repeat 1 44 0 288 0 0 0 chr17 74153529 74153561 -15350992 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 2147 102 0 0 chr17 74153561 74153844 -15350709 - AluSg SINE Alu -27 283 1 235 308 28 16 chr17 74153907 74154030 -15350523 + MLT1J1 LTR MaLR 102 230 -220 2015 114 7 7 chr17 74154135 74154425 -15350128 + AluSx SINE Alu 1 290 -22 303 71 0 0 chr17 74154425 74154467 -15350086 + (GA)n Simple_repeat Simple_repeat 1 42 0 312 343 44 7 chr17 74154807 74154944 -15349609 - L1MDa LINE L1 -2367 4173 4032 198 0 0 0 chr17 74155195 74155217 -15349336 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6683 75 7 0 chr17 74155217 74156655 -15347898 - L1PA8 LINE L1 -11 6161 4719 6880 125 22 1 chr17 74156656 74157924 -15346629 + L1PA8 LINE L1 3372 4744 -1402 428 258 46 46 chr17 74158006 74158223 -15346330 - L1MDa LINE L1 -2867 3673 3457 448 297 80 27 chr17 74158275 74158597 -15345956 + MLT1H LTR MaLR 8 386 -163 366 348 43 14 chr17 74158762 74159181 -15345372 - L1 LINE L1 -3309 3231 2801 1945 61 0 0 chr17 74159691 74159944 -15344609 - AluY SINE Alu 0 305 53 1601 26 0 10 chr17 74161512 74161707 -15342846 - L1PA3 LINE L1 0 6155 5963 1915 226 95 20 chr17 74163195 74163828 -15340725 - L1MDa LINE L1 -3197 3343 2664 234 0 0 0 chr17 74163831 74163857 -15340696 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 125 0 0 chr17 74163927 74163967 -15340586 + (TG)n Simple_repeat Simple_repeat 1 40 0 713 211 8 8 chr17 74163967 74164100 -15340453 - FLAM_A SINE Alu 0 133 1 1070 241 18 30 chr17 74164107 74164502 -15340051 - L1MDa LINE L1 -3890 2650 2261 3655 303 49 28 chr17 74164509 74165875 -15338678 + HERV16 LTR ERVL 1609 3003 -1993 615 45 82 26 chr17 74165886 74166228 -15338325 + (TA)n Simple_repeat Simple_repeat 1 361 0 33 0 0 0 chr17 74166228 74166261 -15338292 + AT_rich Low_complexity Low_complexity 1 33 0 663 76 52 23 chr17 74166261 74166433 -15338120 + (TATAA)n Simple_repeat Simple_repeat 1 177 0 262 202 61 0 chr17 74166433 74166532 -15338021 + (TA)n Simple_repeat Simple_repeat 1 105 0 519 148 0 0 chr17 74166532 74166613 -15337940 + THE1B-int LTR MaLR 1500 1580 0 2804 90 0 3 chr17 74166613 74166978 -15337575 + THE1B LTR MaLR 1 364 0 3546 119 0 17 chr17 74166978 74167508 -15337045 + L1PA16 LINE L1 5441 5961 -205 984 108 0 0 chr17 74167715 74167854 -15336699 + AluSp/q SINE Alu 175 313 0 215 227 40 13 chr17 74168600 74168675 -15335878 + MER5C DNA MER1_type 48 124 -200 293 173 213 0 chr17 74168700 74168775 -15335778 + MER5C DNA MER1_type 233 323 -1 2163 174 21 54 chr17 74169308 74169344 -15335209 - MLT2C2 LTR ERVL -2 462 426 643 39 39 24 chr17 74169344 74169471 -15335082 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 2163 174 21 54 chr17 74169471 74169912 -15334641 - MLT2C2 LTR ERVL -38 426 1 2112 93 0 0 chr17 74171210 74171501 -15333052 + AluSx SINE Alu 30 312 0 214 217 0 33 chr17 74172246 74172287 -15332266 + (TATG)n Simple_repeat Simple_repeat 3 43 -17 2749 16 0 0 chr17 74172287 74172595 -15331958 - AluYa5 SINE Alu -3 308 1 214 217 0 33 chr17 74172595 74172613 -15331940 + (TATG)n Simple_repeat Simple_repeat 43 60 0 30 27 0 0 chr17 74172743 74172780 -15331773 + AT_rich Low_complexity Low_complexity 1 37 0 2169 133 45 14 chr17 74173186 74173539 -15331014 - THE1B LTR MaLR 0 364 1 3093 183 33 5 chr17 74173579 74174190 -15330363 - L1MB8 LINE L1 -208 5970 5343 845 264 70 0 chr17 74174210 74174483 -15330070 - L1MB8 LINE L1 -1971 4175 3884 5662 104 7 26 chr17 74174505 74175373 -15329180 - L1PB1 LINE L1 0 6151 5301 2159 226 16 17 chr17 74175396 74175977 -15328576 - L1MB8 LINE L1 -2268 3878 3299 2030 122 3 3 chr17 74175985 74176279 -15328274 - AluSx SINE Alu -18 294 1 232 330 77 0 chr17 74176925 74177016 -15327537 - L2 LINE L2 -3118 196 99 2109 111 0 0 chr17 74177034 74177350 -15327203 - AluY SINE Alu 0 316 1 1526 179 32 25 chr17 74178775 74178949 -15325604 - AluJo SINE Alu -14 298 120 456 35 0 0 chr17 74178949 74179007 -15325546 + (TG)n Simple_repeat Simple_repeat 2 59 0 1526 179 32 25 chr17 74179007 74179111 -15325442 - AluJo SINE Alu -192 120 18 809 168 32 68 chr17 74179731 74179921 -15324632 + MER20 DNA MER1_type 35 217 -2 2112 67 82 0 chr17 74180229 74180499 -15324054 - AluSc SINE Alu -15 294 3 226 151 57 75 chr17 74180877 74180930 -15323623 - MLT1J2 LTR MaLR 0 450 399 658 271 109 7 chr17 74181018 74181302 -15323251 - MLT1E2 LTR MaLR -304 322 10 3823 67 0 0 chr17 74182332 74182823 -15321730 - L1PA7 LINE L1 0 6154 5664 29 60 0 0 chr17 74183011 74183061 -15321492 + AT_rich Low_complexity Low_complexity 1 50 0 377 299 134 27 chr17 74184172 74184359 -15320194 + LTR33 LTR ERVL 314 520 -1 6480 40 5 1 chr17 74185423 74186231 -15318322 - L1P LINE L1 -3470 2676 1866 11949 31 24 0 chr17 74186231 74188405 -15316148 + L1PA4 LINE L1 3956 6154 -1 1563 133 54 103 chr17 74188416 74188806 -15315747 + L1MA9 LINE L1 5814 6184 -128 1403 95 63 50 chr17 74189118 74189339 -15315214 + AluSc SINE Alu 81 304 -5 613 225 16 32 chr17 74189704 74189891 -15314662 - MER20 DNA MER1_type -1 218 35 1705 181 3 7 chr17 74190201 74190510 -15314043 + AluJo SINE Alu 1 308 -4 22 0 0 0 chr17 74192003 74192025 -15312528 + AT_rich Low_complexity Low_complexity 1 22 0 2409 87 0 0 chr17 74192822 74193120 -15311433 + AluSc SINE Alu 3 300 -9 231 129 0 0 chr17 74193135 74193166 -15311387 + AluSx SINE Alu 3 33 -268 1812 100 79 7 chr17 74193166 74193446 -15311107 + AluSx SINE Alu 11 310 -2 973 164 49 76 chr17 74194176 74194401 -15310152 + MER20 DNA MER1_type 1 219 0 458 271 84 84 chr17 74194504 74194766 -15309787 - MIR SINE MIR 0 262 1 288 330 103 52 chr17 74194798 74195089 -15309464 - L2 LINE L2 -95 3218 2913 219 277 217 92 chr17 74195117 74195217 -15309336 - L2 LINE L2 -495 2819 2733 1992 113 3 14 chr17 74195217 74195540 -15309013 - AluSp SINE Alu 0 322 3 219 277 217 92 chr17 74195540 74195622 -15308931 - L2 LINE L2 -581 2733 2613 560 351 44 4 chr17 74196644 74196735 -15307818 - MIR SINE MIR 0 262 176 351 0 0 0 chr17 74196735 74196774 -15307779 + (CA)n Simple_repeat Simple_repeat 1 39 0 560 351 44 4 chr17 74196774 74196910 -15307643 - MIR SINE MIR -86 176 26 1449 197 4 19 chr17 74197872 74198131 -15306422 - AluJo SINE Alu -24 288 34 2294 92 3 0 chr17 74200010 74200304 -15304249 + AluSp SINE Alu 1 295 -18 183 239 0 0 chr17 74200331 74200377 -15304176 + (TG)n Simple_repeat Simple_repeat 2 47 0 1883 284 124 76 chr17 74201238 74201361 -15303192 + L2 LINE L2 734 850 -2464 2274 99 3 0 chr17 74201361 74201654 -15302899 - AluSq SINE Alu -19 294 1 1883 284 124 76 chr17 74201654 74203080 -15301473 + L2 LINE L2 850 2358 -956 2275 105 7 7 chr17 74204405 74204709 -15299844 - AluSx SINE Alu -8 304 1 350 288 115 75 chr17 74205054 74205115 -15299438 - HAL1b LINE L1 -681 667 610 3930 119 35 0 chr17 74205115 74205743 -15298810 - L1MC1 LINE L1 -13 6320 5671 350 288 115 75 chr17 74205743 74205976 -15298577 - HAL1b LINE L1 -738 610 361 198 0 0 0 chr17 74206600 74206622 -15297931 + (TTA)n Simple_repeat Simple_repeat 3 24 0 42634 33 23 2 chr17 74206622 74212627 -15291926 - L1PA3 LINE L1 -18 6137 1 1323 251 66 73 chr17 74213650 74214303 -15290250 + L1ME3A LINE L1 5519 6166 -4 580 346 71 38 chr17 74214303 74214612 -15289941 - L2 LINE L2 -609 2705 2373 2239 86 45 0 chr17 74214612 74214902 -15289651 + AluSg SINE Alu 1 303 -7 580 346 71 38 chr17 74214902 74215072 -15289481 - L2 LINE L2 -941 2373 2210 816 341 53 19 chr17 74216737 74217328 -15287225 - L2 LINE L2 -189 3083 2471 743 118 72 7 chr17 74217348 74217500 -15287053 - MER53 DNA DNA -26 163 2 1074 332 105 27 chr17 74217597 74218486 -15286067 - L2 LINE L2 -86 3227 2265 593 332 18 14 chr17 74218538 74218761 -15285792 - MIR SINE MIR -7 255 32 192 355 32 0 chr17 74219760 74219822 -15284731 - MIR SINE MIR -68 140 77 4477 93 43 3 chr17 74220072 74220738 -15283815 - L1MA2 LINE L1 -1 6303 5611 230 256 16 85 chr17 74221587 74221629 -15282924 + MIR SINE MIR 107 150 -112 2121 132 34 3 chr17 74221629 74221978 -15282575 + MER46B DNA MER2_type 1 235 -1 230 256 16 85 chr17 74221978 74222064 -15282489 + MIR SINE MIR 150 226 -36 243 0 0 0 chr17 74223448 74223475 -15281078 + (TG)n Simple_repeat Simple_repeat 2 28 0 217 185 31 0 chr17 74223537 74223602 -15280951 + (TA)n Simple_repeat Simple_repeat 1 67 0 189 0 0 0 chr17 74223602 74223623 -15280930 + (CA)n Simple_repeat Simple_repeat 2 22 0 400 268 55 8 chr17 74224712 74224839 -15279714 - MER102b DNA MER1_type -1 340 208 183 81 81 0 chr17 74227138 74227175 -15277378 + L2 LINE L2 3274 3313 0 910 243 4 62 chr17 74227287 74227530 -15277023 + MLT2C2 LTR ERVL 229 457 -7 330 194 0 0 chr17 74229146 74229218 -15275335 + CT-rich Low_complexity Low_complexity 3 74 0 34 24 0 0 chr17 74229585 74229626 -15274927 + AT_rich Low_complexity Low_complexity 1 41 0 2085 143 0 0 chr17 74229802 74229973 -15274580 - AluSx SINE Alu -11 301 128 375 23 0 0 chr17 74229973 74230017 -15274536 + (TG)n Simple_repeat Simple_repeat 1 44 0 2085 143 0 0 chr17 74230017 74230146 -15274407 - AluSx SINE Alu -183 129 1 204 97 0 0 chr17 74230200 74230231 -15274322 + (TC)n Simple_repeat Simple_repeat 1 31 0 400 269 42 0 chr17 74230551 74230718 -15273835 + MER104 DNA MER2_type 4 177 -3 629 290 67 0 chr17 74230780 74230973 -15273580 - MIR SINE MIR -56 206 1 238 240 50 91 chr17 74231464 74231585 -15272968 + MIR SINE MIR 86 201 -61 326 290 40 32 chr17 74232686 74232810 -15271743 - MIR SINE MIR -54 208 84 342 296 55 70 chr17 74233235 74233434 -15271119 + MIR SINE MIR 67 262 0 2278 90 0 0 chr17 74235654 74235943 -15268610 - AluSc SINE Alu -20 289 1 24 0 0 0 chr17 74236622 74236646 -15267907 + AT_rich Low_complexity Low_complexity 1 24 0 316 309 96 39 chr17 74237128 74237306 -15267247 + MIR SINE MIR 57 244 -18 1048 76 0 0 chr17 74237390 74237534 -15267019 + L1PA13 LINE L1 6020 6163 0 186 291 101 13 chr17 74237557 74237636 -15266917 - MIR SINE MIR -20 242 157 1836 209 11 21 chr17 74237636 74238010 -15266543 - MLT1A2 LTR MaLR 0 374 5 768 145 0 0 chr17 74240077 74240194 -15264359 - AluSg/x SINE Alu -11 301 185 2120 110 17 0 chr17 74240510 74240810 -15263743 + AluSx SINE Alu 6 310 -2 1582 195 7 3 chr17 74241693 74241991 -15262562 - AluJb SINE Alu -5 307 9 546 201 52 1 chr17 74241996 74242134 -15262419 - L1ME4a LINE L1 -287 5834 5690 27 29 0 0 chr17 74242972 74243006 -15261547 + AT_rich Low_complexity Low_complexity 1 34 0 1146 189 81 4 chr17 74243649 74243897 -15260656 - MER58B DNA MER1_type 0 341 75 23969 93 4 8 chr17 74243897 74248206 -15256347 + L1PA8 LINE L1 1876 6165 -7 234 344 14 71 chr17 74248429 74248573 -15255980 + MIR3 SINE MIR 45 179 -43 2232 114 3 0 chr17 74248901 74249207 -15255346 + AluSx SINE Alu 1 307 -5 297 0 0 0 chr17 74249208 74249241 -15255312 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 198 373 0 0 chr17 74249499 74249566 -15254987 - MIR SINE MIR -177 85 19 481 278 111 30 chr17 74249697 74249931 -15254622 - MIR SINE MIR -6 256 4 2337 83 19 0 chr17 74250314 74250628 -15253925 - MER1A DNA MER1_type 0 529 210 1857 161 0 0 chr17 74250616 74250895 -15253658 - MER1A DNA MER1_type -248 279 1 * 207 296 281 7 chr17 74251323 74251458 -15253095 + L2 LINE L2 2882 3053 -219 995 184 6 6 chr17 74251527 74251695 -15252858 + FAM SINE Alu 3 170 -5 183 354 56 31 chr17 74251728 74251889 -15252664 + L2 LINE L2 3108 3272 0 1896 140 54 46 chr17 74253055 74253427 -15251126 - THE1C LTR MaLR 0 375 1 866 237 44 44 chr17 74253777 74254093 -15250460 - L1MC5 LINE L1 -559 7402 7087 1012 174 11 5 chr17 74254170 74254354 -15250199 - MER46B DNA MER2_type -1 235 51 405 115 0 0 chr17 74254354 74254432 -15250121 + (TA)n Simple_repeat Simple_repeat 1 78 0 1926 119 19 0 chr17 74254453 74254713 -15249840 - AluSx SINE Alu -25 287 23 524 92 0 0 chr17 74254724 74254799 -15249754 - MER46B DNA MER2_type -181 55 106 1911 119 66 74 chr17 74254799 74254899 -15249654 - THE1C LTR MaLR 0 375 276 2991 128 85 24 chr17 74254899 74255452 -15249101 + LTR4 LTR ERV1 1 587 -1 1911 119 66 74 chr17 74255452 74255729 -15248824 - THE1C LTR MaLR -99 276 1 723 118 18 0 chr17 74255729 74255837 -15248716 - MER46B DNA MER2_type -251 110 1 364 149 75 65 chr17 74255913 74256020 -15248533 - L1MC5 LINE L1 -1089 6872 6765 22 35 0 0 chr17 74257633 74257662 -15246891 + AT_rich Low_complexity Low_complexity 1 29 0 414 39 0 0 chr17 74257802 74257854 -15246699 + (CA)n Simple_repeat Simple_repeat 2 53 0 965 150 18 96 chr17 74259523 74259577 -15244976 + L1MCa LINE L1 781 838 -5588 1625 146 27 41 chr17 74259577 74259871 -15244682 + AluJo SINE Alu 11 300 -12 965 150 18 96 chr17 74259871 74260036 -15244517 + L1MCa LINE L1 838 983 -5443 3293 220 57 12 chr17 74260072 74260830 -15243723 - MER21B LTR ERV1 -53 810 19 429 165 25 25 chr17 74260852 74260931 -15243622 - MER21B LTR ERV1 -773 90 12 5438 184 73 55 chr17 74260942 74261720 -15242833 + L1MCa LINE L1 974 1736 -4690 1680 169 13 29 chr17 74261720 74262034 -15242519 + AluJo SINE Alu 3 311 -1 5438 184 73 55 chr17 74262034 74264121 -15240432 + L1MCa LINE L1 1736 3890 -2536 1417 194 11 8 chr17 74265203 74265471 -15239082 - MER2 DNA MER2_type -1 344 76 2400 128 0 32 chr17 74265994 74266036 -15238517 - THE1B LTR MaLR 0 364 322 2191 99 7 3 chr17 74266036 74266329 -15238224 + AluSg SINE Alu 1 294 -16 2400 128 0 32 chr17 74266329 74266662 -15237891 - THE1B LTR MaLR -42 322 1 1868 186 68 66 chr17 74266683 74267183 -15237370 + MLT1D LTR MaLR 1 501 -4 182 91 30 0 chr17 74268797 74268830 -15235723 + (TA)n Simple_repeat Simple_repeat 2 35 0 1964 127 0 7 chr17 74269981 74270290 -15234263 - AluSx SINE Alu 0 308 2 781 257 40 32 chr17 74270393 74270642 -15233911 - MIR SINE MIR -11 251 1 206 31 0 31 chr17 74271067 74271099 -15233454 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2041 58 0 0 chr17 74271107 74271350 -15233203 - AluY SINE Alu -68 243 1 211 212 91 45 chr17 74272012 74272078 -15232475 + MIR SINE MIR 117 185 -77 280 333 85 4 chr17 74272198 74272411 -15232142 - L1ME LINE L1 -649 5515 5289 302 271 71 58 chr17 74272543 74272783 -15231770 - HAL1 LINE L1 -1046 1461 1219 229 304 76 106 chr17 74272960 74273210 -15231343 + L2 LINE L2 2808 3039 -233 2686 101 3 11 chr17 74273210 74273587 -15230966 + THE1C LTR MaLR 1 374 -1 229 304 76 106 chr17 74273587 74273807 -15230746 + L2 LINE L2 3039 3264 -8 39 38 0 0 chr17 74274675 74274728 -15229825 + AT_rich Low_complexity Low_complexity 1 53 0 1596 133 17 65 chr17 74274764 74275163 -15229390 + AluJb SINE Alu 22 406 0 259 197 136 0 chr17 74276016 74276082 -15228471 + MLT1H LTR MaLR 473 547 -2 435 156 0 62 chr17 74276453 74276549 -15228004 - MER3 DNA MER1_type 0 209 120 996 229 29 52 chr17 74276558 74276868 -15227685 + L1MCb LINE L1 3 305 -5740 359 286 110 55 chr17 74276902 74277084 -15227469 - LTR33 LTR ERVL -258 263 72 25 65 0 0 chr17 74277721 74277767 -15226786 + AT_rich Low_complexity Low_complexity 1 46 0 15836 107 6 29 chr17 74277777 74281253 -15223300 + L1P3 LINE L1 8 3478 -2983 1110 198 22 44 chr17 74281253 74281480 -15223073 - AluJo SINE Alu -90 222 1 702 179 48 14 chr17 74281480 74281625 -15222928 - L1M3e LINE L1 -6874 156 7 25 0 0 0 chr17 74281712 74281737 -15222816 + AT_rich Low_complexity Low_complexity 1 25 0 4735 119 35 12 chr17 74281737 74283463 -15221090 - L1PA16 LINE L1 -9 6157 4397 7280 223 19 6 chr17 74283470 74285231 -15219322 - L1PA16 LINE L1 -1966 4180 2398 26 0 0 0 chr17 74285359 74285385 -15219168 + AT_rich Low_complexity Low_complexity 1 26 0 2159 100 27 0 chr17 74285675 74285975 -15218578 - AluSg SINE Alu -2 308 1 973 283 59 48 chr17 74287204 74287642 -15216911 - L2 LINE L2 -19 3294 2852 788 263 35 13 chr17 74287671 74287899 -15216654 - MIR SINE MIR -28 234 2 663 273 193 16 chr17 74287899 74288349 -15216204 - L2 LINE L2 -1626 1688 1159 408 182 0 0 chr17 74289789 74289877 -15214676 + (CA)n Simple_repeat Simple_repeat 2 89 0 25 0 0 0 chr17 74289989 74290014 -15214539 + AT_rich Low_complexity Low_complexity 1 25 0 728 214 161 31 chr17 74290875 74291197 -15213356 + L1MC5 LINE L1 7537 7900 -61 201 74 0 0 chr17 74292998 74293025 -15211528 + (A)n Simple_repeat Simple_repeat 1 27 0 542 316 144 24 chr17 74293534 74293908 -15210645 + L2 LINE L2 2554 2972 -342 196 218 0 73 chr17 74293906 74293961 -15210592 + L2 LINE L2 3184 3234 -38 * 225 0 0 0 chr17 74293965 74293990 -15210563 + (TA)n Simple_repeat Simple_repeat 2 26 0 1187 278 36 55 chr17 74295901 74296376 -15208177 + L2 LINE L2 2463 2928 -386 441 172 125 31 chr17 74296418 74296546 -15208007 + L2 LINE L2 3139 3278 -35 21 0 0 0 chr17 74296728 74296749 -15207804 + AT_rich Low_complexity Low_complexity 1 21 0 615 297 157 51 chr17 74297752 74298215 -15206338 + L2 LINE L2 2789 3272 0 678 239 0 16 chr17 74298353 74298537 -15206016 - L1MB8 LINE L1 -3 6175 5995 2772 7 0 0 chr17 74298999 74299300 -15205253 - AluYa5 SINE Alu -10 301 1 334 246 119 15 chr17 74299730 74299864 -15204689 - MIR SINE MIR -1 261 114 680 245 89 61 chr17 74300762 74301193 -15203360 + LTR15 LTR ERV1 172 595 0 181 324 29 15 chr17 74301193 74301261 -15203292 + MIR3 SINE MIR 134 202 -6 519 75 12 25 chr17 74302986 74303066 -15201487 + MADE1 DNA Mariner 2 80 0 189 179 107 54 chr17 74303230 74303286 -15201267 + L3 LINE CR1 427 485 -1092 21 82 0 0 chr17 74304364 74304413 -15200140 + AT_rich Low_complexity Low_complexity 1 49 0 2071 134 0 0 chr17 74304595 74304887 -15199666 + AluSg SINE Alu 7 298 -12 515 245 141 13 chr17 74305670 74306221 -15198332 + L1PB4 LINE L1 5590 5925 -231 2336 153 108 6 chr17 74305706 74305880 -15198673 + L1MB2 LINE L1 5631 5786 -385 1769 118 8 0 chr17 74305880 74306134 -15198419 + AluSq SINE Alu 58 313 0 2336 153 108 6 chr17 74306134 74306449 -15198104 + L1MB2 LINE L1 5786 6170 -1 415 288 125 11 chr17 74308486 74308670 -15195883 + MIR SINE MIR 58 262 0 2154 136 0 3 chr17 74308795 74309090 -15195463 + AluSx SINE Alu 5 298 -14 1810 155 11 0 chr17 74309544 74309828 -15194725 + AluSx SINE Alu 3 289 -23 213 65 0 0 chr17 74312047 74312078 -15192475 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2132 106 3 35 chr17 74312166 74312478 -15192075 + AluSx SINE Alu 1 302 -10 210 246 0 82 chr17 74313166 74313227 -15191326 - L2 LINE L2 -7 3306 3251 2206 123 0 0 chr17 74313789 74314091 -15190462 + AluSx SINE Alu 1 302 -10 26 0 0 0 chr17 74314228 74314254 -15190299 + AT_rich Low_complexity Low_complexity 1 26 0 212 267 36 78 chr17 74314552 74314766 -15189787 + MIR SINE MIR 62 261 -1 25 0 0 0 chr17 74314852 74314877 -15189676 + AT_rich Low_complexity Low_complexity 1 25 0 389 278 88 16 chr17 74315446 74315640 -15188913 + L2 LINE L2 1293 1500 -1814 213 329 37 56 chr17 74315645 74315806 -15188747 + L2 LINE L2 2737 2894 -420 365 327 88 32 chr17 74315846 74316097 -15188456 + L2 LINE L2 3043 3307 -6 516 256 0 31 chr17 74316728 74316857 -15187696 + MIR SINE MIR 124 248 -14 3977 159 47 13 chr17 74317001 74317707 -15186846 + MER44D DNA MER2_type 2 603 -2 861 326 31 13 chr17 74317801 74318184 -15186369 + LTR16C LTR ERVL 100 489 -2 2626 93 25 6 chr17 74318854 74319220 -15185333 + THE1C LTR MaLR 3 375 0 2312 134 8 0 chr17 74319934 74320291 -15184262 + L1PB4 LINE L1 5793 6152 -4 23 78 0 0 chr17 74320414 74320465 -15184088 + AT_rich Low_complexity Low_complexity 1 51 0 6762 24 4 1 chr17 74321254 74322053 -15182500 + L1PA4 LINE L1 5354 6154 -1 256 200 99 26 chr17 74323131 74323207 -15181346 + L1P LINE L1 4737 4817 -1329 21 36 0 0 chr17 74323226 74323254 -15181299 + AT_rich Low_complexity Low_complexity 1 28 0 1515 199 61 0 chr17 74323343 74323620 -15180933 - AluJb SINE Alu -18 294 1 331 292 80 15 chr17 74323721 74323858 -15180695 + MIR SINE MIR 117 262 0 531 313 53 4 chr17 74323887 74324168 -15180385 + L1ME4a LINE L1 5525 5819 -302 21 0 0 0 chr17 74324788 74324809 -15179744 + AT_rich Low_complexity Low_complexity 1 21 0 307 298 64 21 chr17 74325200 74325341 -15179212 + L1ME4a LINE L1 5974 6120 -1 333 358 121 27 chr17 74325858 74326336 -15178217 + L2 LINE L2 1705 2227 -1087 201 39 0 0 chr17 74326413 74326439 -15178114 + (CA)n Simple_repeat Simple_repeat 1 26 0 182 301 178 0 chr17 74326448 74326521 -15178032 - MER5B DNA MER1_type 0 178 93 295 212 0 59 chr17 74326602 74326687 -15177866 - MER5B DNA MER1_type -98 80 1 246 298 160 32 chr17 74326914 74327102 -15177451 + L2 LINE L2 2623 2834 -480 210 208 0 0 chr17 74327201 74327249 -15177304 + (CATA)n Simple_repeat Simple_repeat 1 48 0 365 322 19 27 chr17 74327283 74327544 -15177009 + L1ME3A LINE L1 5692 5950 -220 30 45 0 0 chr17 74329218 74329262 -15175291 + AT_rich Low_complexity Low_complexity 1 44 0 745 272 5 28 chr17 74329551 74329764 -15174789 + MIR SINE MIR 11 218 -44 184 261 22 0 chr17 74329734 74329780 -15174773 + L2 LINE L2 3266 3312 -1 * 221 320 108 27 chr17 74329827 74329967 -15174586 + MER5A DNA MER1_type 28 187 -2 * 261 350 78 28 chr17 74329967 74330095 -15174458 - MIR SINE MIR -96 166 30 1928 39 0 0 chr17 74330406 74330669 -15173884 + L1PA4 LINE L1 5907 6169 0 24 0 0 0 chr17 74331382 74331406 -15173147 + AT_rich Low_complexity Low_complexity 1 24 0 23 92 0 0 chr17 74332266 74332331 -15172222 + AT_rich Low_complexity Low_complexity 1 65 0 32 26 0 0 chr17 74332523 74332562 -15171991 + AT_rich Low_complexity Low_complexity 1 39 0 29 98 0 0 chr17 74332666 74332758 -15171795 + AT_rich Low_complexity Low_complexity 1 92 0 505 221 126 95 chr17 74332948 74333181 -15171372 - MIR SINE MIR -21 241 4 2361 289 95 27 chr17 74333193 74333843 -15170710 + L1ME3 LINE L1 3769 4373 -1789 1574 190 30 13 chr17 74333843 74334143 -15170410 + AluJb SINE Alu 1 305 -7 2361 289 95 27 chr17 74334143 74335531 -15169022 + L1ME3 LINE L1 4373 5951 -211 23 68 0 0 chr17 74337248 74337292 -15167261 + AT_rich Low_complexity Low_complexity 1 44 0 2147 122 3 7 chr17 74337512 74337808 -15166745 + AluSx SINE Alu 1 295 -17 374 231 145 0 chr17 74338000 74338117 -15166436 - L1ME LINE L1 -351 5811 5678 285 364 16 23 chr17 74338492 74338621 -15165932 - MIR3 SINE MIR -17 191 64 30 27 0 0 chr17 74339573 74339610 -15164943 + AT_rich Low_complexity Low_complexity 1 37 0 200 29 0 59 chr17 74339928 74339962 -15164591 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 2053 120 14 0 chr17 74339967 74340258 -15164295 - AluSx SINE Alu -17 295 1 203 309 8 0 chr17 74340312 74340438 -15164115 + (TA)n Simple_repeat Simple_repeat 2 128 0 437 310 48 5 chr17 74340749 74340955 -15163598 + MIR3 SINE MIR 15 241 -21 563 261 11 17 chr17 74341390 74341566 -15162987 + L1MD2 LINE L1 6164 6338 -21 1429 173 75 56 chr17 74341681 74342039 -15162514 + MLT1A1 LTR MaLR 1 365 0 2174 113 7 0 chr17 74342367 74342659 -15161894 - AluSx SINE Alu -18 294 1 201 158 79 0 chr17 74342788 74342826 -15161727 + L2 LINE L2 2866 2906 -408 375 367 108 21 chr17 74342937 74343384 -15161169 + L2 LINE L2 2782 3266 -6 725 295 41 53 chr17 74345400 74345742 -15158811 + MLT1J2 LTR MaLR 3 340 -110 1209 34 0 0 chr17 74345794 74345941 -15158612 - L1PA3 LINE L1 -1641 4505 4359 7548 35 0 0 chr17 74345941 74347589 -15156964 + L1PA3 LINE L1 4508 6155 0 286 98 0 0 chr17 74347598 74347639 -15156914 + MLT1I LTR MaLR 323 363 -46 21 36 0 0 chr17 74348310 74348338 -15156215 + AT_rich Low_complexity Low_complexity 1 28 0 302 264 11 22 chr17 74350257 74350348 -15154205 + L1MC4 LINE L1 6614 6703 -1339 22 35 0 0 chr17 74350682 74350711 -15153842 + AT_rich Low_complexity Low_complexity 1 29 0 323 364 89 26 chr17 74350991 74351293 -15153260 + L1MEd LINE L1 122 442 -5677 536 42 14 0 chr17 74351294 74351365 -15153188 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 694 295 44 16 chr17 74351470 74351721 -15152832 + MIR SINE MIR 5 262 0 262 64 0 43 chr17 74351722 74351769 -15152784 + (TCC)n Simple_repeat Simple_repeat 2 46 0 366 226 8 24 chr17 74352232 74352356 -15152197 + CT-rich Low_complexity Low_complexity 1 122 0 2973 98 12 2 chr17 74353060 74353466 -15151087 + MLT2A2 LTR ERVL 1 410 -43 374 86 25 141 chr17 74353501 74353907 -15150646 + (TA)n Simple_repeat Simple_repeat 1 358 0 297 221 33 41 chr17 74353960 74354082 -15150471 + L1MC/D LINE L1 5700 5820 -1988 24 0 0 0 chr17 74354277 74354301 -15150252 + AT_rich Low_complexity Low_complexity 1 24 0 1173 219 11 22 chr17 74354310 74354584 -15149969 - L1MB4 LINE L1 -28 6152 5882 1791 176 46 0 chr17 74355034 74355363 -15149190 - MSTB1 LTR MaLR -88 344 1 398 262 70 128 chr17 74357983 74358146 -15146407 + L2 LINE L2 1904 2075 -1197 886 211 50 0 chr17 74358146 74358345 -15146208 - MER3 DNA MER1_type 0 209 1 398 262 70 128 chr17 74358345 74358800 -15145753 + L2 LINE L2 2075 3036 -236 242 252 244 35 chr17 74358800 74358915 -15145638 + L2 LINE L2 3158 3296 -17 1260 166 0 5 chr17 74360068 74360267 -15144286 + AluJb SINE Alu 87 284 -28 285 29 0 0 chr17 74360277 74360311 -15144242 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr17 74360711 74360732 -15143821 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 1830 169 14 0 chr17 74361899 74362195 -15142358 - AluJo SINE Alu -8 304 5 424 187 0 55 chr17 74364043 74364134 -15140419 + FLAM_A SINE Alu 52 137 -5 25 75 0 0 chr17 74364231 74364284 -15140269 + AT_rich Low_complexity Low_complexity 1 53 0 409 316 15 15 chr17 74364987 74365120 -15139433 + L1MEd LINE L1 1307 1439 -5508 502 258 56 38 chr17 74365127 74365414 -15139139 + L1M4 LINE L1 4812 5103 -1043 39 38 0 0 chr17 74365415 74365468 -15139085 + AT_rich Low_complexity Low_complexity 1 53 0 246 311 72 60 chr17 74365621 74365939 -15138614 + L1M4 LINE L1 4038 4359 -1787 183 42 0 0 chr17 74365953 74365977 -15138576 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 26 64 0 0 chr17 74366000 74366047 -15138506 + AT_rich Low_complexity Low_complexity 1 47 0 351 284 104 84 chr17 74366164 74366538 -15138015 + L1M4 LINE L1 4635 5015 -1131 242 244 158 43 chr17 74366539 74366703 -15137850 + L1MEd LINE L1 1383 1565 -5294 1226 269 85 9 chr17 74366729 74367176 -15137377 + L1MEd LINE L1 1741 2221 -4738 4372 174 52 29 chr17 74367281 74367805 -15136748 + L1MB2 LINE L1 4795 5305 -866 2042 117 0 0 chr17 74367805 74368079 -15136474 + AluSc SINE Alu 1 274 -35 183 42 0 0 chr17 74368083 74368107 -15136446 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4372 174 52 29 chr17 74368107 74368902 -15135651 + L1MB2 LINE L1 5307 6170 -1 7483 139 21 25 chr17 74369043 74370282 -15134271 + HSMAR2 DNA Mariner 1 1244 -58 384 77 0 0 chr17 74370282 74370334 -15134219 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 2051 107 7 0 chr17 74370334 74370615 -15133938 - AluSx SINE Alu -29 283 1 7483 139 21 25 chr17 74370615 74370681 -15133872 + HSMAR2 DNA Mariner 1242 1301 -1 15410 141 45 11 chr17 74373178 74375804 -15128749 + Tigger2 DNA MER2_type 1 2715 -3 346 239 165 0 chr17 74375843 74375952 -15128601 + L2 LINE L2 3187 3313 0 1968 133 60 31 chr17 74376114 74376466 -15128087 + THE1B LTR MaLR 3 364 0 428 304 8 89 chr17 74376501 74376758 -15127795 - MIR SINE MIR -19 243 8 874 256 114 3 chr17 74376856 74377164 -15127389 + L1M4 LINE L1 4490 4831 -1315 2221 114 0 0 chr17 74377484 74377782 -15126771 + AluSx SINE Alu 1 298 -14 186 43 0 0 chr17 74377916 74377939 -15126614 + (A)n Simple_repeat Simple_repeat 1 23 0 563 292 148 34 chr17 74378514 74379463 -15125090 + L1MEd LINE L1 683 1743 -4472 2235 169 13 0 chr17 74379717 74380102 -15124451 + MLT1B LTR MaLR 1 390 0 436 281 116 25 chr17 74380173 74380594 -15123959 + L1MEd LINE L1 2166 2597 -3618 228 227 93 27 chr17 74381428 74381503 -15123050 + MIR3 SINE MIR 121 200 -8 619 135 21 0 chr17 74383215 74383311 -15121242 - Tigger7 DNA MER2_type 0 2487 2390 1561 172 31 0 chr17 74383313 74383569 -15120984 - Tigger7 DNA MER2_type -469 264 1 953 162 27 0 chr17 74384214 74384362 -15120191 - Tigger7 DNA MER2_type -2335 152 1 2312 103 0 7 chr17 74385151 74385453 -15119100 + AluSx SINE Alu 1 300 -12 245 29 29 0 chr17 74385453 74385487 -15119066 + (TA)n Simple_repeat Simple_repeat 2 36 0 906 206 22 0 chr17 74385854 74386038 -15118515 + MER5A DNA MER1_type 2 189 0 741 114 0 0 chr17 74386578 74386692 -15117861 + AluSp/q SINE Alu 200 313 0 23 0 0 0 chr17 74387621 74387644 -15116909 + AT_rich Low_complexity Low_complexity 1 23 0 313 304 152 0 chr17 74387757 74387882 -15116671 - L2 LINE L2 0 3313 3170 327 286 61 0 chr17 74387883 74387981 -15116572 - MER67D LTR ERV1 -99 415 312 193 261 43 14 chr17 74389006 74389075 -15115478 - L2 LINE L2 -158 3155 3085 30 69 0 0 chr17 74389094 74389152 -15115401 + AT_rich Low_complexity Low_complexity 1 58 0 505 289 42 0 chr17 74389210 74389352 -15115201 + L2 LINE L2 3162 3309 -4 204 135 0 0 chr17 74389356 74389393 -15115160 + (TA)n Simple_repeat Simple_repeat 1 37 0 739 273 105 0 chr17 74389393 74389602 -15114951 - MIR SINE MIR -30 232 2 293 310 0 35 chr17 74390832 74390948 -15113605 - LTR16A LTR ERVL -99 351 240 5490 127 82 6 chr17 74390948 74392021 -15112532 + L1PBa LINE L1 127 1426 -5437 4262 81 10 96 chr17 74392021 74392396 -15112157 + L1PB1 LINE L1 5481 5764 -387 288 0 0 0 chr17 74392396 74392428 -15112125 + (CA)n Simple_repeat Simple_repeat 2 33 0 4262 81 10 96 chr17 74392428 74392782 -15111771 + L1PB1 LINE L1 5764 6147 -4 23 33 0 0 chr17 74392790 74392820 -15111733 + AT_rich Low_complexity Low_complexity 1 30 0 294 284 32 11 chr17 74393955 74394119 -15110434 + L2 LINE L2 1686 1927 -1387 554 300 51 51 chr17 74394156 74394449 -15110104 + L2 LINE L2 3008 3300 -13 627 215 47 37 chr17 74394845 74395036 -15109517 + LTR45B LTR ERV1 297 489 0 5156 129 15 5 chr17 74395984 74397360 -15107193 - L1PA15 LINE L1 0 6165 4795 33 0 0 0 chr17 74398287 74398320 -15106233 + AT_rich Low_complexity Low_complexity 1 33 0 207 139 0 0 chr17 74399071 74399107 -15105446 + (CA)n Simple_repeat Simple_repeat 1 36 0 2020 76 57 4 chr17 74399522 74399819 -15104734 + AluSc SINE Alu 1 311 0 258 261 15 0 chr17 74400356 74400421 -15104132 + MLT1H LTR MaLR 14 79 -470 31 58 0 0 chr17 74402839 74402891 -15101662 + AT_rich Low_complexity Low_complexity 1 52 0 9579 60 6 88 chr17 74403035 74404486 -15100067 - SVA Other Other 0 1386 55 354 45 0 0 chr17 74404487 74404531 -15100022 + (GGGAGA)n Simple_repeat Simple_repeat 4 47 0 237 224 0 20 chr17 74404867 74404916 -15099637 + GA-rich Low_complexity Low_complexity 3 50 0 763 314 163 28 chr17 74404951 74405594 -15098959 + L2 LINE L2 1762 2491 -823 357 260 110 20 chr17 74405820 74405920 -15098633 + MLT2E LTR ERVL 41 149 -479 311 323 99 65 chr17 74406204 74406848 -15097705 + L2 LINE L2 2563 3229 -43 566 253 129 13 chr17 74407659 74407892 -15096661 - MIR SINE MIR -2 260 1 1897 143 0 3 chr17 74408206 74408493 -15096060 - AluJb SINE Alu -26 286 1 2185 80 17 3 chr17 74409274 74409563 -15094990 - AluSx SINE Alu -19 293 1 23 0 0 0 chr17 74410094 74410117 -15094436 + AT_rich Low_complexity Low_complexity 1 23 0 180 385 66 33 chr17 74410832 74411076 -15093477 + L2 LINE L2 2340 2591 -723 1800 178 3 0 chr17 74412329 74412627 -15091926 + AluJb SINE Alu 3 301 -11 184 100 0 0 chr17 74412749 74412779 -15091774 - L2 LINE L2 -9 3304 3275 392 190 149 25 chr17 74412876 74412997 -15091556 - L2 LINE L2 -19 3294 3159 309 310 124 0 chr17 74413023 74413152 -15091401 + MIR3 SINE MIR 19 163 -45 1441 159 7 30 chr17 74413804 74414075 -15090478 + L1M3e LINE L1 1 265 -6765 233 122 24 0 chr17 74414074 74414115 -15090438 - L1 LINE L1 -959 5187 5146 * 227 224 20 0 chr17 74414142 74414191 -15090362 + Tigger5 DNA MER2_type 6 55 -2268 * 368 192 14 14 chr17 74414160 74414233 -15090320 + Tigger5 DNA MER2_type 2251 2323 0 5283 145 39 34 chr17 74414233 74415536 -15089017 + L1MA8 LINE L1 4977 6284 -7 2356 78 3 7 chr17 74415616 74415925 -15088628 + AluY SINE Alu 1 308 -3 1777 159 7 20 chr17 74416236 74416538 -15088015 + AluJo SINE Alu 2 299 -13 1650 150 112 0 chr17 74417161 74417474 -15087079 - MER7A DNA MER2_type 0 346 1 236 30 30 0 chr17 74417555 74417588 -15086965 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2182 111 25 46 chr17 74417588 74417651 -15086902 - L1PB1 LINE L1 -10 6141 6078 2947 6 0 0 chr17 74417651 74417969 -15086584 - AluYb8 SINE Alu 0 318 1 2182 111 25 46 chr17 74417969 74418273 -15086280 - L1PB1 LINE L1 -73 6078 5782 228 219 0 31 chr17 74418273 74418337 -15086216 + (TA)n Simple_repeat Simple_repeat 1 62 0 560 68 0 0 chr17 74418337 74418410 -15086143 - L1PB1 LINE L1 -360 5791 5719 * 2012 119 3 3 chr17 74418404 74418707 -15085846 + L1PB1 LINE L1 5438 5740 -411 518 124 11 11 chr17 74418714 74418761 -15085792 - L1PB1 LINE L1 -314 5837 5788 561 12 0 37 chr17 74418761 74418842 -15085711 + (TA)n Simple_repeat Simple_repeat 1 78 0 518 124 11 11 chr17 74418842 74418883 -15085670 - L1PB1 LINE L1 -362 5789 5749 * 6982 206 26 5 chr17 74418882 74420467 -15084086 - L1 LINE L1 -2418 3728 2110 4975 124 33 53 chr17 74420469 74421355 -15083198 - L1PBa LINE L1 -5543 1320 453 2757 3 0 0 chr17 74421714 74422009 -15082544 + AluYa5 SINE Alu 1 295 -16 23 54 0 0 chr17 74422369 74422406 -15082147 + AT_rich Low_complexity Low_complexity 1 37 0 664 275 82 16 chr17 74422775 74423019 -15081534 - MIR SINE MIR -1 261 2 491 284 78 10 chr17 74423905 74424109 -15080444 + MIR SINE MIR 13 230 -32 30 27 0 0 chr17 74424150 74424187 -15080366 + AT_rich Low_complexity Low_complexity 1 37 0 2293 96 3 3 chr17 74424446 74424748 -15079805 + AluSq SINE Alu 2 303 -10 1176 194 0 0 chr17 74424854 74425086 -15079467 + L1MD1 LINE L1 5608 5839 -403 29 47 0 0 chr17 74425300 74425343 -15079210 + AT_rich Low_complexity Low_complexity 1 43 0 726 142 8 0 chr17 74425510 74425630 -15078923 + L1MA4 LINE L1 6175 6295 -5 26 0 0 0 chr17 74425759 74425785 -15078768 + AT_rich Low_complexity Low_complexity 1 26 0 343 328 8 30 chr17 74425794 74425928 -15078625 + MIR SINE MIR 23 153 -109 22 35 0 0 chr17 74426006 74426035 -15078518 + AT_rich Low_complexity Low_complexity 1 29 0 303 219 0 31 chr17 74426081 74426177 -15078376 + (TAGA)n Simple_repeat Simple_repeat 4 96 0 242 252 130 17 chr17 74426684 74426799 -15077754 + MLT1H LTR MaLR 406 533 -16 337 343 72 97 chr17 74427429 74427820 -15076733 - L2 LINE L2 -6 3266 2886 499 336 152 14 chr17 74427841 74428210 -15076343 - L2 LINE L2 -642 2672 2253 1052 214 39 0 chr17 74428233 74428439 -15076114 + MER58A DNA MER1_type 2 215 -9 364 335 201 33 chr17 74428461 74429249 -15075304 - L2 LINE L2 -1080 2234 1315 1941 94 69 7 chr17 74429556 74429832 -15074721 + AluSx SINE Alu 4 296 -16 417 309 45 8 chr17 74433226 74433477 -15071076 + L1MC5 LINE L1 7262 7497 -519 334 273 20 0 chr17 74433686 74433785 -15070768 + L1MC4 LINE L1 7914 8014 -28 22 0 0 0 chr17 74435954 74435976 -15068577 + AT_rich Low_complexity Low_complexity 1 22 0 464 295 49 36 chr17 74436613 74436837 -15067716 - MIR SINE MIR -26 236 10 24 0 0 0 chr17 74437397 74437421 -15067132 + AT_rich Low_complexity Low_complexity 1 24 0 1439 173 101 78 chr17 74437428 74437815 -15066738 + MSTD LTR MaLR 1 396 0 222 333 157 6 chr17 74437845 74438004 -15066549 + MIR3 SINE MIR 26 208 0 530 158 74 0 chr17 74438507 74438602 -15065951 - MLT1B LTR MaLR 0 390 289 489 223 20 47 chr17 74438623 74438771 -15065782 - MLT1B LTR MaLR -155 312 169 5776 215 62 15 chr17 74438771 74441312 -15063241 - L1 LINE L1 -3016 4549 1880 1068 326 24 27 chr17 74441744 74442195 -15062358 - L1 LINE L1 -5504 1982 1533 206 121 0 0 chr17 74443254 74443287 -15061266 + (A)n Simple_repeat Simple_repeat 1 33 0 1012 184 62 0 chr17 74444229 74444408 -15060145 + MER20 DNA MER1_type 30 219 0 1225 265 75 52 chr17 74444546 74445104 -15059449 - HERV16 LTR ERVL -2181 2815 2245 1756 191 88 35 chr17 74445133 74445361 -15059192 + MLT1C LTR MaLR 23 238 -229 2272 95 7 3 chr17 74445361 74445657 -15058896 + AluSg SINE Alu 1 297 -13 1756 191 88 35 chr17 74445657 74445851 -15058702 + MLT1C LTR MaLR 238 467 0 1751 288 55 12 chr17 74445853 74446363 -15058190 - HERV16 LTR ERVL -2795 2201 1670 1360 309 60 28 chr17 74446391 74446487 -15058066 - HERV16 LTR ERVL -3424 1572 1481 3164 171 63 21 chr17 74446487 74447119 -15057434 - MER67B LTR ERV1 0 661 3 1360 309 60 28 chr17 74447119 74447833 -15056720 - HERV16 LTR ERVL -3515 1481 708 1316 227 212 73 chr17 74448496 74449369 -15055184 + L2 LINE L2 2292 3313 0 2074 98 56 0 chr17 74449938 74450225 -15054328 - AluSg SINE Alu -5 305 3 1364 170 190 3 chr17 74450731 74451020 -15053533 - MER7A DNA MER2_type -4 342 2 1952 162 0 0 chr17 74451096 74451392 -15053161 + AluJb SINE Alu 1 296 -16 22 35 0 0 chr17 74451917 74451946 -15052607 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr17 74451975 74452002 -15052551 + AT_rich Low_complexity Low_complexity 1 27 0 26 50 0 0 chr17 74452374 74452414 -15052139 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr17 74452601 74452629 -15051924 + AT_rich Low_complexity Low_complexity 1 28 0 431 125 102 0 chr17 74455455 74455543 -15049010 + L1MA7 LINE L1 6193 6289 -2 28 0 0 0 chr17 74455547 74455575 -15048978 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr17 74455706 74455731 -15048822 + AT_rich Low_complexity Low_complexity 1 25 0 1578 155 7 76 chr17 74456178 74456506 -15048047 - AluJb SINE Alu 0 307 1 190 211 11 11 chr17 74457759 74457849 -15046704 + (TA)n Simple_repeat Simple_repeat 2 91 0 2533 241 45 18 chr17 74458178 74458963 -15045590 - L1MD3 LINE L1 -18 7977 6964 2320 64 3 10 chr17 74459497 74459793 -15044760 - AluY SINE Alu -17 294 1 230 309 0 0 chr17 74459974 74460029 -15044524 - MIR3 SINE MIR -47 161 107 2062 123 0 3 chr17 74460034 74460336 -15044217 + AluSx SINE Alu 1 301 -11 1902 154 52 9 chr17 74460362 74460692 -15043861 + MER7A DNA MER2_type 5 346 0 976 166 0 55 chr17 74462120 74462301 -15042252 - AluJo SINE Alu -138 174 4 594 305 95 11 chr17 74462383 74462645 -15041908 - L2 LINE L2 -204 3109 2826 21 0 0 0 chr17 74463768 74463789 -15040764 + AT_rich Low_complexity Low_complexity 1 21 0 293 262 24 0 chr17 74463838 74463922 -15040631 + L1ME4a LINE L1 5963 6048 -73 2205 124 0 6 chr17 74463922 74464236 -15040317 - AluSx SINE Alu 0 312 1 224 265 147 0 chr17 74464289 74464391 -15040162 - L2 LINE L2 0 3313 3197 1879 129 58 20 chr17 74464563 74464857 -15039696 + AluSx SINE Alu 1 305 -7 2558 165 26 65 chr17 74465606 74466176 -15038377 + L1PA16 LINE L1 5600 6147 -19 1199 140 89 92 chr17 74466416 74466687 -15037866 + L1MB8 LINE L1 5474 5743 -441 1007 180 0 45 chr17 74466958 74467158 -15037395 + L1MB8 LINE L1 5916 6106 -72 180 0 0 0 chr17 74467316 74467336 -15037217 + (TTG)n Simple_repeat Simple_repeat 2 21 0 26 64 0 0 chr17 74467408 74467455 -15037098 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr17 74468557 74468595 -15035958 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr17 74469299 74469328 -15035225 + AT_rich Low_complexity Low_complexity 1 29 0 5722 164 15 15 chr17 74469714 74471178 -15033375 - L1PA16 LINE L1 -9 6157 4693 2063 121 0 7 chr17 74471178 74471476 -15033077 - AluSc SINE Alu -13 296 1 5722 164 15 15 chr17 74471476 74471846 -15032707 - L1PA16 LINE L1 -1473 4693 4325 2962 184 101 8 chr17 74473296 74473953 -15030600 + L1MD1 LINE L1 5524 6241 -1 870 10 0 0 chr17 74473955 74474053 -15030500 + L1PA2 LINE L1 6050 6147 -8 42 0 0 49 chr17 74474053 74474114 -15030439 + AT_rich Low_complexity Low_complexity 1 58 0 22 56 0 0 chr17 74474243 74474279 -15030274 + AT_rich Low_complexity Low_complexity 1 36 0 2171 73 11 14 chr17 74474331 74474655 -15029898 - AluSp SINE Alu 0 323 1 24 32 0 0 chr17 74474658 74474689 -15029864 + AT_rich Low_complexity Low_complexity 1 31 0 256 291 111 42 chr17 74475088 74475277 -15029276 + MIR SINE MIR 59 260 -2 182 283 0 57 chr17 74475728 74475781 -15028772 + MIR SINE MIR 62 111 -97 3016 179 18 55 chr17 74476910 74477582 -15026971 + L1MB8 LINE L1 5526 6172 -6 24 53 0 0 chr17 74477802 74477840 -15026713 + AT_rich Low_complexity Low_complexity 1 38 0 21 82 0 0 chr17 74478404 74478453 -15026100 + AT_rich Low_complexity Low_complexity 1 49 0 645 292 35 40 chr17 74478887 74479113 -15025440 + MIR SINE MIR 19 243 -19 267 103 0 0 chr17 74479120 74479159 -15025394 + (CTG)n Simple_repeat Simple_repeat 2 40 0 2158 95 0 0 chr17 74480917 74481256 -15023297 - AluSx SINE Alu 0 339 1 1766 171 0 16 chr17 74481720 74482024 -15022529 - AluJb SINE Alu -13 299 1 221 171 0 0 chr17 74482071 74482112 -15022441 + A-rich Low_complexity Low_complexity 1 41 0 2079 139 0 0 chr17 74482340 74482642 -15021911 - AluSx SINE Alu -10 302 1 21 36 0 0 chr17 74482939 74482967 -15021586 + AT_rich Low_complexity Low_complexity 1 28 0 420 227 92 7 chr17 74483058 74483199 -15021354 + MER103 DNA DNA 13 165 -1 1288 218 55 30 chr17 74483205 74483567 -15020986 + MLT1A2 LTR MaLR 1 371 -3 2120 100 0 7 chr17 74483605 74483886 -15020667 - AluSc SINE Alu -30 279 1 2880 57 8 13 chr17 74483932 74484316 -15020237 + L1PA7 LINE L1 5771 6152 -2 261 64 0 128 chr17 74484800 74484847 -15019706 + LTR23 LTR ERV1 320 360 -77 764 228 218 3 chr17 74485471 74485769 -15018784 + L1ME3A LINE L1 5582 5943 -227 22 35 0 0 chr17 74486163 74486192 -15018361 + AT_rich Low_complexity Low_complexity 1 29 0 12871 25 2 0 chr17 74486252 74488544 -15016009 + L1PA3 LINE L1 3857 6154 -1 29 0 0 0 chr17 74488544 74488573 -15015980 + AT_rich Low_complexity Low_complexity 1 29 0 31 68 0 0 chr17 74488767 74488826 -15015727 + AT_rich Low_complexity Low_complexity 1 59 0 1061 321 138 36 chr17 74489515 74489988 -15014565 + L2 LINE L2 1812 2236 -1077 2104 93 26 13 chr17 74489988 74490290 -15014263 + AluSx SINE Alu 1 306 -6 1061 321 138 36 chr17 74490290 74490479 -15014074 + L2 LINE L2 2236 2404 -909 1963 156 10 0 chr17 74490479 74490781 -15013772 - AluJb SINE Alu -7 305 1 1061 321 138 36 chr17 74490781 74491347 -15013206 + L2 LINE L2 2404 3173 -140 29 28 0 0 chr17 74491360 74491396 -15013157 + AT_rich Low_complexity Low_complexity 1 36 0 993 178 5 35 chr17 74491653 74491850 -15012703 + AluJo SINE Alu 76 266 -46 250 161 49 62 chr17 74491851 74491932 -15012621 - Charlie1b DNA MER1_type -33 490 411 1530 216 50 16 chr17 74492040 74492424 -15012129 - Charlie1b DNA MER1_type -126 397 1 1000 281 4 35 chr17 74492462 74492722 -15011831 + MIR SINE MIR 1 252 -10 21 0 0 0 chr17 74492959 74492980 -15011573 + AT_rich Low_complexity Low_complexity 1 21 0 530 276 33 28 chr17 74493922 74494103 -15010450 - MIR SINE MIR -75 187 6 3252 159 24 5 chr17 74494406 74494958 -15009595 + MER68 LTR ERV1 1 562 0 24 0 0 0 chr17 74495407 74495431 -15009122 + AT_rich Low_complexity Low_complexity 1 24 0 860 106 23 15 chr17 74496090 74496257 -15008296 + FLAM_C SINE Alu 1 168 0 910 159 12 12 chr17 74496332 74496502 -15008051 + L1PB3 LINE L1 5985 6154 0 26 64 0 0 chr17 74496844 74496891 -15007662 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr17 74497549 74497587 -15006966 + AT_rich Low_complexity Low_complexity 1 38 0 281 295 74 16 chr17 74497891 74498013 -15006540 + MIR SINE MIR 73 201 -61 1961 148 13 0 chr17 74499334 74499637 -15004916 + AluJb SINE Alu 1 307 -5 1133 230 76 5 chr17 74499735 74500118 -15004435 - L1M4 LINE L1 -1601 4545 4136 611 237 16 6 chr17 74500221 74500523 -15004030 + L1ME LINE L1 5100 5460 -710 420 156 167 0 chr17 74500541 74500631 -15003922 + MER20 DNA MER1_type 25 129 -90 816 211 88 16 chr17 74500719 74500913 -15003640 - MLT2C2 LTR ERVL -47 417 210 1527 209 110 5 chr17 74500936 74501310 -15003243 + MLT2C2 LTR ERVL 1 413 -51 450 36 0 0 chr17 74501337 74501393 -15003160 + (TG)n Simple_repeat Simple_repeat 2 57 0 34 42 0 0 chr17 74502252 74502300 -15002253 + AT_rich Low_complexity Low_complexity 1 48 0 1755 182 75 24 chr17 74502650 74502985 -15001568 + MSTA LTR MaLR 77 428 0 4484 188 22 10 chr17 74502985 74503813 -15000740 + MSTA-int LTR MaLR 1 838 -813 1824 184 6 0 chr17 74503914 74504245 -15000308 - Tigger1 DNA MER2_type -1734 684 352 23 68 0 0 chr17 74504402 74504446 -15000107 + AT_rich Low_complexity Low_complexity 1 44 0 50 42 0 0 chr17 74504647 74504718 -14999835 + AT_rich Low_complexity Low_complexity 1 71 0 1144 200 5 5 chr17 74505067 74505272 -14999281 + AluJo SINE Alu 1 205 -107 1539 125 31 0 chr17 74505675 74505931 -14998622 + L1MA3 LINE L1 6042 6305 0 2810 7 0 0 chr17 74505956 74506265 -14998288 + AluYa5 SINE Alu 1 309 -2 297 287 40 53 chr17 74506632 74506782 -14997771 - MLT1H LTR MaLR -389 160 13 2019 46 4 0 chr17 74506899 74507162 -14997391 + L1P LINE L1 2335 2598 -3548 237 222 0 83 chr17 74508975 74509047 -14995506 + L2 LINE L2 3248 3313 0 2303 50 32 0 chr17 74509398 74509681 -14994872 + AluSg SINE Alu 1 292 -18 3949 160 21 11 chr17 74509737 74510480 -14994073 - L1MB2 LINE L1 -2 6169 5419 2252 110 0 10 chr17 74510758 74511059 -14993494 - AluSx SINE Alu -12 300 3 228 238 0 0 chr17 74511104 74511167 -14993386 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 2510 69 0 0 chr17 74511328 74511633 -14992920 - AluSx SINE Alu -7 305 1 24 0 0 0 chr17 74511793 74511817 -14992736 + AT_rich Low_complexity Low_complexity 1 24 0 1971 138 0 0 chr17 74511817 74512106 -14992447 - AluSq SINE Alu -24 289 1 2344 85 0 3 chr17 74513478 74513794 -14990759 - L1PB1 LINE L1 -2 6149 5835 186 308 39 39 chr17 74513810 74513914 -14990639 - L3 LINE CR1 -133 1444 1341 2197 96 0 3 chr17 74513943 74514236 -14990317 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr17 74514795 74514817 -14989736 + AT_rich Low_complexity Low_complexity 1 22 0 687 191 0 8 chr17 74514904 74515035 -14989518 + FLAM_A SINE Alu 1 130 -3 2017 110 39 3 chr17 74515163 74515445 -14989108 + AluSq SINE Alu 7 298 -15 351 0 0 0 chr17 74515560 74515599 -14988954 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 229 167 0 0 chr17 74515617 74515659 -14988894 + LTR66 LTR ERVL 394 435 -175 411 167 0 0 chr17 74515769 74515835 -14988718 + MER20 DNA MER1_type 151 216 -3 2147 118 3 0 chr17 74516050 74516354 -14988199 + AluSx SINE Alu 1 305 -7 23 33 0 0 chr17 74516614 74516644 -14987909 + AT_rich Low_complexity Low_complexity 1 30 0 967 201 66 8 chr17 74516693 74516937 -14987616 - Tigger2 DNA MER2_type 0 2718 2461 4325 152 24 7 chr17 74517006 74517743 -14986810 - Tigger2 DNA MER2_type -1967 751 2 22 56 0 0 chr17 74518115 74518151 -14986402 + AT_rich Low_complexity Low_complexity 1 36 0 212 149 21 0 chr17 74518160 74518207 -14986346 + T-rich Low_complexity Low_complexity 3 50 0 2118 144 0 0 chr17 74518495 74518801 -14985752 + AluSx SINE Alu 4 309 -3 464 103 11 35 chr17 74519261 74519348 -14985205 + L1MA8 LINE L1 6202 6286 -5 1859 163 0 3 chr17 74519712 74520001 -14984552 + AluJb SINE Alu 1 288 -24 917 119 7 0 chr17 74520020 74520171 -14984382 + (GGAA)n Simple_repeat Simple_repeat 1 152 0 5594 147 40 8 chr17 74520385 74521265 -14983288 + L1PB1 LINE L1 4872 5805 -346 384 22 0 0 chr17 74521265 74521310 -14983243 + (CA)n Simple_repeat Simple_repeat 2 46 0 5594 147 40 8 chr17 74521310 74521669 -14982884 + L1PB1 LINE L1 5805 6151 0 3454 126 34 0 chr17 74521746 74522254 -14982299 - MER1A DNA MER1_type -1 526 2 783 221 10 53 chr17 74522273 74522481 -14982072 + MER3 DNA MER1_type 11 209 0 275 254 0 0 chr17 74522436 74522491 -14982062 - MER3 DNA MER1_type -117 92 38 * 197 208 10 115 chr17 74522555 74522651 -14981902 - L2 LINE L2 -792 2522 2437 23 0 0 0 chr17 74523231 74523254 -14981299 + AT_rich Low_complexity Low_complexity 1 23 0 353 343 90 22 chr17 74523581 74523759 -14980794 + MIR3 SINE MIR 19 208 0 23 0 0 0 chr17 74524411 74524434 -14980119 + AT_rich Low_complexity Low_complexity 1 23 0 1808 155 10 7 chr17 74524914 74525223 -14979330 - AluJb SINE Alu 0 312 3 1563 149 13 79 chr17 74525451 74525594 -14978959 + AluJb SINE Alu 1 113 -199 705 82 0 0 chr17 74525594 74525691 -14978862 + (TA)n Simple_repeat Simple_repeat 2 98 0 1563 149 13 79 chr17 74525691 74525862 -14978691 + AluJb SINE Alu 113 294 -18 313 280 102 25 chr17 74527223 74527341 -14977212 - MIR3 SINE MIR -3 205 79 1763 183 0 3 chr17 74527396 74527685 -14976868 + AluJo SINE Alu 1 288 -24 23 0 0 0 chr17 74528113 74528136 -14976417 + AT_rich Low_complexity Low_complexity 1 23 0 34 42 0 0 chr17 74528480 74528528 -14976025 + AT_rich Low_complexity Low_complexity 1 48 0 261 268 0 14 chr17 74529487 74529558 -14974995 - MIR SINE MIR -58 204 135 23 0 0 0 chr17 74530904 74530927 -14973626 + AT_rich Low_complexity Low_complexity 1 23 0 1748 192 10 0 chr17 74531371 74531673 -14972880 + AluJb SINE Alu 3 307 -5 22 0 0 0 chr17 74531879 74531901 -14972652 + AT_rich Low_complexity Low_complexity 1 22 0 1166 216 48 24 chr17 74531954 74532246 -14972307 - AluJb SINE Alu 0 302 4 224 318 127 17 chr17 74532279 74532452 -14972101 - L3b LINE CR1 -115 1468 1277 303 331 107 39 chr17 74532578 74532713 -14971840 + MIR SINE MIR 71 222 -40 1717 173 19 22 chr17 74532713 74533026 -14971527 + AluJb SINE Alu 1 312 0 303 331 107 39 chr17 74533026 74533068 -14971485 + MIR SINE MIR 222 260 -2 2150 112 3 13 chr17 74533287 74533600 -14970953 - AluSx SINE Alu -2 310 1 580 143 10 31 chr17 74534120 74534218 -14970335 + FLAM_C SINE Alu 34 129 -14 773 206 0 65 chr17 74534387 74534557 -14969996 - FRAM SINE Alu -7 159 1 22 35 0 0 chr17 74534749 74534778 -14969775 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr17 74535914 74535936 -14968617 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr17 74536009 74536039 -14968514 + AT_rich Low_complexity Low_complexity 1 30 0 1703 224 47 67 chr17 74537094 74537313 -14967240 + L1MDb LINE L1 771 993 -5413 2273 99 0 0 chr17 74537313 74537607 -14966946 + AluSg SINE Alu 3 296 -14 1703 224 47 67 chr17 74537607 74538022 -14966531 + L1MDb LINE L1 993 1352 -5054 2041 135 20 0 chr17 74538022 74538325 -14966228 + AluSx SINE Alu 3 311 -1 1703 224 47 67 chr17 74538325 74538655 -14965898 + L1MDb LINE L1 1352 1687 -4719 * 1802 226 101 22 chr17 74538648 74538923 -14965630 + L1MB5 LINE L1 5509 5761 -413 2105 127 10 19 chr17 74538923 74539230 -14965323 + AluSx SINE Alu 1 304 -8 1802 226 101 22 chr17 74539230 74539449 -14965104 + L1MB5 LINE L1 5761 6042 -132 1964 116 65 0 chr17 74539922 74540199 -14964354 - AluSq SINE Alu -16 297 3 981 284 24 0 chr17 74541688 74541938 -14962615 + MIR SINE MIR 7 262 0 360 316 79 0 chr17 74541943 74542082 -14962471 + HAL1 LINE L1 960 1109 -1398 2096 121 17 0 chr17 74543896 74544194 -14960359 + AluSc SINE Alu 1 303 -6 24 32 0 0 chr17 74544578 74544609 -14959944 + AT_rich Low_complexity Low_complexity 1 31 0 1114 220 11 88 chr17 74544932 74545342 -14959211 + LTR24B LTR ERV1 163 467 0 1587 185 64 27 chr17 74545587 74545916 -14958637 + MER58B DNA MER1_type 1 341 0 185 264 71 90 chr17 74546077 74546232 -14958321 - L2 LINE L2 -282 2990 2839 436 227 26 58 chr17 74546368 74546522 -14958031 + L2 LINE L2 1302 1450 -1864 1493 159 67 21 chr17 74546847 74547130 -14957423 + AluJb SINE Alu 1 296 -16 873 158 137 26 chr17 74547450 74547640 -14956913 + AluJo SINE Alu 82 292 -20 481 274 62 43 chr17 74547888 74548096 -14956457 + MIR SINE MIR 21 232 -30 3861 120 9 4 chr17 74550044 74550568 -14953985 - MER1A DNA MER1_type 0 527 1 1867 174 3 3 chr17 74551133 74551443 -14953110 - AluJb SINE Alu 0 312 3 2058 144 73 17 chr17 74551669 74552024 -14952529 + THE1C LTR MaLR 1 375 0 231 152 0 0 chr17 74553085 74553131 -14951422 + (TTA)n Simple_repeat Simple_repeat 1 46 0 853 294 240 8 chr17 74553964 74554477 -14950076 + L3 LINE CR1 312 943 -634 1676 176 72 94 chr17 74554570 74554970 -14949583 + MLT1D LTR MaLR 6 395 -110 1757 164 4 4 chr17 74554970 74555271 -14949282 - AluJo SINE Alu 0 305 5 1676 176 72 94 chr17 74555271 74555380 -14949173 + MLT1D LTR MaLR 395 505 0 261 316 35 26 chr17 74555677 74555791 -14948762 - MIR SINE MIR 0 262 148 492 338 77 65 chr17 74556014 74556337 -14948216 - L2 LINE L2 -1 3271 2945 2327 93 3 0 chr17 74556345 74556645 -14947908 + AluSp SINE Alu 2 302 -11 24 32 0 0 chr17 74556924 74556955 -14947598 + AT_rich Low_complexity Low_complexity 1 31 0 312 402 30 6 chr17 74557945 74558109 -14946444 + L1MEd LINE L1 34 201 -5918 322 237 35 41 chr17 74558344 74558513 -14946040 + L1MEd LINE L1 602 769 -5350 774 172 9 0 chr17 74558553 74558669 -14945884 + FLAM_C SINE Alu 3 119 -24 237 33 0 0 chr17 74558671 74558701 -14945852 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 233 200 33 0 chr17 74558738 74558798 -14945755 + A-rich Low_complexity Low_complexity 1 62 0 330 343 20 0 chr17 74558836 74558938 -14945615 - L2 LINE L2 -17 3296 3193 532 282 82 33 chr17 74558938 74559243 -14945310 + L1MEd LINE L1 938 1257 -4862 1581 154 43 21 chr17 74559351 74559630 -14944923 + AluJb SINE Alu 1 285 -27 203 203 0 51 chr17 74559658 74559717 -14944836 + A-rich Low_complexity Low_complexity 4 59 0 243 261 139 43 chr17 74561436 74561551 -14943002 - L2 LINE L2 -8 3305 3180 214 356 21 85 chr17 74561586 74561774 -14942779 + MER5A DNA MER1_type 1 187 -2 31 26 0 0 chr17 74562358 74562396 -14942157 + AT_rich Low_complexity Low_complexity 1 38 0 1656 116 4 0 chr17 74563013 74563246 -14941307 + AluSc SINE Alu 1 234 -75 1964 156 3 0 chr17 74563247 74563548 -14941005 - AluSq SINE Alu -9 304 3 3872 103 59 2 chr17 74564128 74564651 -14939902 - MER41A LTR ERV1 0 554 2 398 325 8 0 chr17 74566113 74566230 -14938323 + L1ME4a LINE L1 5492 5609 -512 920 135 15 0 chr17 74566234 74566367 -14938186 + AluSq/x SINE Alu 1 135 -178 2128 100 10 0 chr17 74566367 74566657 -14937896 + AluSx SINE Alu 1 293 -19 1243 199 89 58 chr17 74566670 74567017 -14937536 - MLT1A2 LTR MaLR -8 366 9 283 143 0 0 chr17 74567017 74567066 -14937487 + L1ME4a LINE L1 5604 5652 -469 315 236 138 80 chr17 74567265 74567372 -14937181 + L1ME4a LINE L1 5762 5861 -260 2408 109 0 0 chr17 74567372 74567684 -14936869 + AluSx SINE Alu 1 312 0 315 236 138 80 chr17 74567684 74567851 -14936702 + L1ME4a LINE L1 5861 6052 -69 219 69 0 0 chr17 74568037 74568066 -14936487 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2192 123 0 3 chr17 74568428 74568730 -14935823 + AluSx SINE Alu 1 301 -11 336 102 0 0 chr17 74568730 74568779 -14935774 + (GGAGA)n Simple_repeat Simple_repeat 1 49 0 210 71 0 0 chr17 74568809 74568837 -14935716 + (GGGGA)n Simple_repeat Simple_repeat 4 31 0 1931 108 63 11 chr17 74568897 74569183 -14935370 - AluSg SINE Alu -9 301 1 2351 108 0 0 chr17 74569193 74569499 -14935054 - AluSx SINE Alu -6 306 1 797 145 7 86 chr17 74569532 74569684 -14934869 - LTR8A LTR ERV1 -1 726 587 1062 132 121 5 chr17 74569687 74569877 -14934676 + AluJb SINE Alu 87 298 -14 1086 81 47 0 chr17 74569877 74570025 -14934528 - LTR8A LTR ERV1 -572 155 1 371 121 0 17 chr17 74570025 74570081 -14934472 - MER4D LTR ERV1 -817 55 1 423 0 0 0 chr17 74570130 74570177 -14934376 + (TG)n Simple_repeat Simple_repeat 2 48 0 678 165 0 0 chr17 74570178 74570281 -14934272 - AluJ SINE Alu -28 284 182 4490 148 13 3 chr17 74570281 74570977 -14933576 + MER50 LTR ERV1 9 711 -23 800 236 84 0 chr17 74570978 74571039 -14933514 - AluJ SINE Alu -119 193 139 270 0 0 0 chr17 74571039 74571069 -14933484 + (TG)n Simple_repeat Simple_repeat 1 30 0 800 236 84 0 chr17 74571069 74571185 -14933368 - AluJ SINE Alu -173 139 1 346 247 0 14 chr17 74571369 74571442 -14933111 - L2 LINE L2 0 3313 3242 2134 70 3 79 chr17 74571801 74572116 -14932437 + AluSg SINE Alu 1 291 -19 2058 151 0 0 chr17 74572275 74572587 -14931966 - AluSx SINE Alu 0 312 1 329 126 4 8 chr17 74573383 74573445 -14931108 + Alu SINE Alu 247 292 -10 1502 196 70 48 chr17 74573591 74573727 -14930826 + MLT1A1 LTR MaLR 1 132 -233 1599 166 56 3 chr17 74573727 74574011 -14930542 + AluSx SINE Alu 1 299 -13 1502 196 70 48 chr17 74574011 74574231 -14930322 + MLT1A1 LTR MaLR 132 365 0 499 209 47 26 chr17 74574321 74574740 -14929813 + MER34B LTR ERV1 1 562 -3 616 241 29 17 chr17 74574757 74574931 -14929622 + Charlie1 DNA MER1_type 2572 2747 -14 818 238 56 32 chr17 74575032 74575284 -14929269 + LTR37A LTR ERV1 47 304 -122 1517 144 9 0 chr17 74576296 74576525 -14928028 - AluJb SINE Alu 0 312 82 1735 157 35 3 chr17 74576622 74576908 -14927645 - AluJo SINE Alu -17 295 1 2500 82 0 0 chr17 74577236 74577540 -14927013 - AluSx SINE Alu -8 304 1 937 139 13 7 chr17 74577844 74577995 -14926558 + AluJo SINE Alu 120 271 -41 279 0 0 0 chr17 74578020 74578051 -14926502 + (CA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr17 74578176 74578197 -14926356 + AT_rich Low_complexity Low_complexity 1 21 0 333 267 161 39 chr17 74578211 74578391 -14926162 + MIR SINE MIR 7 208 -54 1611 173 4 22 chr17 74578400 74578677 -14925876 + AluSx SINE Alu 1 272 -40 464 241 0 0 chr17 74580252 74580335 -14924218 - L2 LINE L2 0 3272 3190 329 0 0 24 chr17 74580336 74580378 -14924175 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 197 133 123 chr17 74580480 74580871 -14923682 + MSTD LTR MaLR 1 395 -1 6082 121 21 44 chr17 74581056 74581464 -14923089 + L1MA4A LINE L1 5067 5483 -820 2395 87 0 13 chr17 74581464 74581773 -14922780 - AluSp SINE Alu -8 305 1 6082 121 21 44 chr17 74581773 74582454 -14922099 + L1MA4A LINE L1 5483 6130 -173 2032 147 0 6 chr17 74582454 74582766 -14921787 + AluSx SINE Alu 1 310 -2 6082 121 21 44 chr17 74582766 74582922 -14921631 + L1MA4A LINE L1 6130 6288 -15 647 293 33 13 chr17 74582926 74583171 -14921382 - L2 LINE L2 -273 3040 2796 416 251 55 70 chr17 74583450 74583649 -14920904 + LTR16C LTR ERVL 296 491 0 270 136 0 0 chr17 74583677 74583721 -14920832 + (TTTTC)n Simple_repeat Simple_repeat 1 44 0 504 0 0 0 chr17 74583722 74583778 -14920775 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 2024 138 7 0 chr17 74583778 74584075 -14920478 - AluSx SINE Alu -13 299 1 1284 220 27 20 chr17 74584075 74584371 -14920182 - L2 LINE L2 -529 2785 2488 1564 199 34 40 chr17 74584387 74584741 -14919812 + MLT1A1 LTR MaLR 13 365 0 1447 174 17 31 chr17 74584804 74585091 -14919462 - AluJb SINE Alu -29 283 1 337 182 59 24 chr17 74585682 74585852 -14918701 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 1151 137 0 12 chr17 74586075 74586243 -14918310 - AluSg/x SINE Alu -13 299 134 2340 88 3 0 chr17 74586315 74586612 -14917941 + AluSp SINE Alu 1 298 -15 2437 84 0 0 chr17 74586930 74587229 -14917324 - AluSx SINE Alu -9 303 5 272 299 109 3 chr17 74587423 74587551 -14917002 + MIR3 SINE MIR 31 169 -39 1847 142 33 13 chr17 74587625 74587928 -14916625 - AluSx SINE Alu -3 309 1 1047 119 4 23 chr17 74588017 74588313 -14916240 + (TTTC)n Simple_repeat Simple_repeat 2 468 0 924 217 0 53 chr17 74588319 74588467 -14916086 - AluJb SINE Alu -31 281 146 2313 82 3 10 chr17 74588467 74588771 -14915782 - AluSp SINE Alu -11 302 1 924 217 0 53 chr17 74588771 74588829 -14915724 - AluJb SINE Alu -166 146 86 2815 145 40 13 chr17 74588889 74589385 -14915168 - MER41B LTR ERV1 -12 597 100 1371 199 72 8 chr17 74589444 74589806 -14914747 + LTR37A LTR ERV1 39 423 -3 2094 141 3 3 chr17 74589843 74590142 -14914411 - AluJb SINE Alu -13 299 1 579 219 0 42 chr17 74590313 74590514 -14914039 - AluJb SINE Alu 0 393 198 1669 166 25 7 chr17 74590949 74591257 -14913296 + AluJb SINE Alu 1 313 0 4478 117 61 37 chr17 74591614 74591805 -14912748 - MER4E LTR ERV1 0 779 594 2338 92 0 3 chr17 74591805 74592130 -14912423 + AluSp SINE Alu 1 313 0 4478 117 61 37 chr17 74592130 74592472 -14912081 - MER4E LTR ERV1 -185 594 262 1059 75 12 6 chr17 74592472 74592632 -14911921 + (TTC)n Simple_repeat Simple_repeat 2 162 0 2142 76 0 38 chr17 74592634 74592923 -14911630 - AluSg SINE Alu -32 278 1 4478 117 61 37 chr17 74592923 74593123 -14911430 - MER4E LTR ERV1 -517 262 24 641 274 144 60 chr17 74593184 74593767 -14910786 - L2 LINE L2 -8 3305 2690 956 136 0 0 chr17 74594548 74594680 -14909873 + FLAM_C SINE Alu 1 132 -1 675 275 69 37 chr17 74594698 74595047 -14909506 + HAL1b LINE L1 112 471 -877 520 257 197 13 chr17 74595054 74595206 -14909347 + MER5A DNA MER1_type 9 188 -1 933 229 147 80 chr17 74595209 74595671 -14908882 + HAL1b LINE L1 465 895 -453 2566 41 0 29 chr17 74595671 74595985 -14908568 + AluY SINE Alu 2 306 -5 933 229 147 80 chr17 74595985 74596121 -14908432 + HAL1b LINE L1 895 1020 -328 2135 111 7 10 chr17 74596121 74596419 -14908134 - AluSx SINE Alu -15 297 1 933 229 147 80 chr17 74596419 74596478 -14908075 + HAL1b LINE L1 1020 1167 -181 2415 66 0 17 chr17 74596510 74596811 -14907742 - AluY SINE Alu -15 296 1 21 0 0 0 chr17 74596959 74596980 -14907573 + AT_rich Low_complexity Low_complexity 1 21 0 729 227 0 0 chr17 74597019 74597147 -14907406 + FLAM_A SINE Alu 1 128 -5 231 88 0 0 chr17 74597149 74597183 -14907370 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 471 174 0 0 chr17 74597218 74597287 -14907266 + AluJ/FRAM SINE Alu 214 282 -30 227 56 56 0 chr17 74597287 74597323 -14907230 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 1915 133 6 37 chr17 74597355 74597677 -14906876 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 74597733 74597767 -14906786 + AT_rich Low_complexity Low_complexity 1 34 0 2365 96 0 3 chr17 74598034 74598337 -14906216 - AluSc SINE Alu -5 304 3 693 293 85 57 chr17 74598416 74599149 -14905404 + L1MEd LINE L1 535 1177 -4850 821 251 59 47 chr17 74599157 74599339 -14905214 + L1MEd LINE L1 2293 2471 -3658 2256 99 3 31 chr17 74599339 74599624 -14904929 + AluSp SINE Alu 1 278 -35 210 37 0 0 chr17 74599624 74599651 -14904902 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2256 99 3 31 chr17 74599651 74599687 -14904866 + AluSp SINE Alu 278 313 0 821 251 59 47 chr17 74599687 74599910 -14904643 + L1MEd LINE L1 2471 2703 -3426 649 264 41 48 chr17 74599953 74600081 -14904472 + L1ME3A LINE L1 5683 5810 -360 2068 142 3 0 chr17 74600081 74600384 -14904169 + AluSx SINE Alu 2 305 -7 649 264 41 48 chr17 74600384 74600524 -14904029 + L1ME3A LINE L1 5810 5949 -221 1996 158 0 0 chr17 74600599 74600910 -14903643 + AluSx SINE Alu 1 311 -1 304 281 42 83 chr17 74601092 74601260 -14903293 - L1ME LINE L1 -1114 4966 4812 1898 90 38 62 chr17 74601260 74601587 -14902966 - AluSx SINE Alu 0 321 2 304 281 42 83 chr17 74601587 74601705 -14902848 - L1ME LINE L1 -1268 4812 4691 796 157 167 91 chr17 74601725 74601923 -14902630 - MER20 DNA MER1_type -6 213 1 923 254 98 15 chr17 74602024 74602554 -14901999 - L1ME LINE L1 -1513 4567 270 2053 129 37 0 chr17 74602583 74602669 -14901884 - AluSx SINE Alu -6 306 225 189 0 0 0 chr17 74602669 74602690 -14901863 + (TCC)n Simple_repeat Simple_repeat 1 21 0 2053 129 37 0 chr17 74602690 74602898 -14901655 - AluSx SINE Alu -87 225 1 1954 217 65 11 chr17 74603181 74603624 -14900929 - MLT1C LTR MaLR 0 467 1 2413 68 0 10 chr17 74603866 74604174 -14900379 + AluY SINE Alu 1 305 -6 2283 69 14 0 chr17 74604377 74604667 -14899886 + AluY SINE Alu 1 294 -17 1685 128 0 35 chr17 74604837 74605095 -14899458 - AluSx SINE Alu -63 249 1 1647 149 102 4 chr17 74605343 74605618 -14898935 + AluJb SINE Alu 9 310 -2 198 0 0 0 chr17 74605687 74605709 -14898844 + (TA)n Simple_repeat Simple_repeat 2 23 0 610 129 12 0 chr17 74606396 74606481 -14898072 - FLAM_A SINE Alu -21 121 36 1249 148 5 38 chr17 74606518 74606728 -14897825 + AluJo SINE Alu 1 203 -109 1142 136 0 11 chr17 74606844 74607020 -14897533 - AluSc SINE Alu -4 305 132 1891 146 13 23 chr17 74607020 74607321 -14897232 - AluSp SINE Alu -15 298 1 2161 114 0 43 chr17 74607488 74607812 -14896741 + AluSx SINE Alu 1 310 -2 279 339 46 46 chr17 74608306 74608436 -14896117 + L2 LINE L2 3165 3294 -19 1011 249 155 76 chr17 74608445 74608844 -14895709 - L2 LINE L2 -3 3310 2944 2218 97 23 0 chr17 74608844 74609143 -14895410 + AluSg SINE Alu 1 306 -4 1011 249 155 76 chr17 74609143 74609463 -14895090 - L2 LINE L2 -369 2944 2511 2424 90 0 3 chr17 74609463 74609775 -14894778 + AluY SINE Alu 1 311 0 1011 249 155 76 chr17 74609775 74609894 -14894659 - L2 LINE L2 -802 2511 2403 329 262 87 0 chr17 74609899 74610002 -14894551 + MER94 DNA DNA 3 114 -20 447 217 0 4 chr17 74610019 74610178 -14894375 + MER20 DNA MER1_type 3 219 0 2295 92 0 3 chr17 74610438 74610730 -14893823 + AluSc SINE Alu 1 291 -18 4149 164 25 21 chr17 74610786 74611575 -14892978 - L1MB2 LINE L1 -2 6169 5378 2290 110 0 10 chr17 74611807 74612108 -14892445 - AluSx SINE Alu -12 300 3 228 238 0 0 chr17 74612153 74612216 -14892337 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 2580 66 0 0 chr17 74612377 74612680 -14891873 - AluSx SINE Alu -9 303 1 2071 137 0 7 chr17 74612846 74613153 -14891400 - AluSq SINE Alu -8 305 1 2514 85 0 3 chr17 74614525 74614841 -14889712 - L1PB1 LINE L1 -2 6149 5835 2252 95 0 3 chr17 74614990 74615284 -14889269 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr17 74615843 74615865 -14888688 + AT_rich Low_complexity Low_complexity 1 22 0 761 191 0 8 chr17 74615952 74616083 -14888470 + FLAM_A SINE Alu 1 130 -3 2057 110 39 3 chr17 74616211 74616493 -14888060 + AluSq SINE Alu 7 298 -15 351 0 0 0 chr17 74616608 74616647 -14887906 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 258 156 0 0 chr17 74616665 74616710 -14887843 + LTR66 LTR ERVL 394 438 -172 504 200 0 0 chr17 74616713 74616818 -14887735 + (TA)n Simple_repeat Simple_repeat 1 105 0 2089 108 7 0 chr17 74616827 74617113 -14887440 - AluSx SINE Alu -24 288 1 2291 98 0 3 chr17 74617486 74617791 -14886762 + AluSx SINE Alu 2 305 -7 840 261 18 9 chr17 74617959 74618185 -14886368 - MIR SINE MIR -22 240 13 1960 148 7 0 chr17 74618915 74619212 -14885341 - AluSx SINE Alu -13 299 1 1202 146 0 0 chr17 74619247 74619439 -14885114 - L1MA6 LINE L1 -2 6298 6107 2188 118 0 0 chr17 74620145 74620463 -14884090 - AluSg SINE Alu 0 318 1 14758 132 12 46 chr17 74620721 74621209 -14883344 + Tigger1 DNA MER2_type 1 504 -1914 2261 117 0 0 chr17 74621209 74621517 -14883036 + AluSq SINE Alu 1 308 -5 14758 132 12 46 chr17 74621517 74621711 -14882842 + Tigger1 DNA MER2_type 504 703 -1715 2177 122 0 10 chr17 74621711 74622014 -14882539 + AluSx SINE Alu 12 311 -1 14758 132 12 46 chr17 74622014 74622553 -14882000 + Tigger1 DNA MER2_type 703 1259 -1159 1464 150 24 40 chr17 74622553 74622800 -14881753 + AluJb SINE Alu 1 243 -69 14758 132 12 46 chr17 74622800 74622818 -14881735 + Tigger1 DNA MER2_type 1259 1276 -1142 288 0 0 0 chr17 74622818 74622850 -14881703 + (GA)n Simple_repeat Simple_repeat 1 32 0 14758 132 12 46 chr17 74622850 74623915 -14880638 + Tigger1 DNA MER2_type 1276 2375 -43 962 193 0 19 chr17 74623915 74624076 -14880477 + FRAM SINE Alu 1 158 -8 2195 115 0 37 chr17 74624077 74624400 -14880153 + AluSx SINE Alu 1 311 -1 14758 132 12 46 chr17 74624400 74624591 -14879962 + Tigger1 DNA MER2_type 2374 2418 0 2180 106 14 0 chr17 74624682 74624975 -14879578 - AluSg SINE Alu -13 297 1 1944 155 0 43 chr17 74625730 74626053 -14878500 + AluJb SINE Alu 1 309 -3 31 0 0 0 chr17 74627374 74627405 -14877148 + AT_rich Low_complexity Low_complexity 1 31 0 980 132 0 22 chr17 74627407 74627543 -14877010 - FLAM_C SINE Alu 0 133 1 879 208 17 22 chr17 74627639 74627806 -14876747 - MER58A DNA MER1_type -2196 224 57 2133 118 23 0 chr17 74627806 74628111 -14876442 + AluSx SINE Alu 1 312 0 235 296 0 0 chr17 74628147 74628201 -14876352 - MER58A DNA MER1_type -167 57 4 252 130 0 0 chr17 74628703 74628749 -14875804 + (TA)n Simple_repeat Simple_repeat 2 47 0 252 236 45 0 chr17 74628752 74628841 -14875712 - L1MC4 LINE L1 -1336 6706 6614 248 169 91 13 chr17 74628845 74628922 -14875631 - LTR66 LTR ERVL -171 439 357 * 1720 162 63 3 chr17 74628888 74629190 -14875363 - MER2 DNA MER2_type -25 320 1 2315 90 3 7 chr17 74629769 74630069 -14874484 + AluSc SINE Alu 1 299 -10 238 325 166 0 chr17 74630204 74630367 -14874186 - L2 LINE L2 -12 3260 3071 2386 83 0 3 chr17 74631159 74631460 -14873093 - AluY SINE Alu -11 300 1 573 286 68 6 chr17 74631620 74631781 -14872772 - MIR3 SINE MIR -6 202 32 2105 125 7 0 chr17 74631853 74632150 -14872403 + AluSq SINE Alu 1 299 -14 1104 183 27 27 chr17 74632180 74632399 -14872154 - MER20 DNA MER1_type 0 219 1 2067 108 56 0 chr17 74632756 74633043 -14871510 + AluSx SINE Alu 1 303 -9 1030 132 48 48 chr17 74633276 74633294 -14871259 + AluSg/x SINE Alu 121 138 -174 1691 144 7 25 chr17 74633294 74633579 -14870974 + AluJo SINE Alu 21 300 -12 1030 132 48 48 chr17 74633579 74633749 -14870804 + AluSg/x SINE Alu 137 309 -3 2082 135 6 3 chr17 74633772 74634083 -14870470 + AluSx SINE Alu 1 312 0 242 222 0 83 chr17 74635843 74635915 -14868638 + L2 LINE L2 3248 3313 0 2277 66 30 16 chr17 74636266 74636589 -14867964 + AluSg SINE Alu 1 310 0 284 211 14 0 chr17 74638846 74638917 -14865636 + (TATG)n Simple_repeat Simple_repeat 1 72 0 192 125 0 0 chr17 74640065 74640097 -14864456 + (GGGA)n Simple_repeat Simple_repeat 2 33 0 882 260 164 23 chr17 74641163 74641682 -14862871 - L1ME4a LINE L1 -16 6105 5514 2027 114 57 0 chr17 74641929 74642210 -14862343 + AluSx SINE Alu 1 297 -15 444 247 145 18 chr17 74642822 74642988 -14861565 - MIR3 SINE MIR -13 195 9 2500 63 0 16 chr17 74643808 74644124 -14860429 - AluY SINE Alu 0 311 1 2348 114 0 0 chr17 74644406 74644714 -14859839 - AluSx SINE Alu -4 308 1 296 252 81 36 chr17 74644976 74645087 -14859466 - MIR SINE MIR -89 173 58 1591 174 23 58 chr17 74645111 74645156 -14859397 + MER58B DNA MER1_type 8 53 -2367 2116 92 0 11 chr17 74645156 74645465 -14859088 - AluSc SINE Alu 0 306 1 1591 174 23 58 chr17 74645465 74645763 -14858790 + MER58B DNA MER1_type 53 340 -1 528 138 0 0 chr17 74646150 74646230 -14858323 + MADE1 DNA Mariner 1 80 0 564 291 76 5 chr17 74646675 74646885 -14857668 - MIR SINE MIR -25 237 13 2291 102 0 0 chr17 74647589 74647893 -14856660 - AluSg SINE Alu -6 304 1 404 207 147 0 chr17 74648341 74648457 -14856096 - FLAM_A SINE Alu 0 133 1 501 331 56 0 chr17 74648537 74648715 -14855838 + MIR SINE MIR 65 252 -10 225 232 18 0 chr17 74648693 74648749 -14855804 - L2 LINE L2 0 3272 3216 * 181 114 0 45 chr17 74649699 74649743 -14854810 + (TAAAAA)n Simple_repeat Simple_repeat 6 47 0 225 265 86 68 chr17 74650313 74650430 -14854123 - L2 LINE L2 -7 3306 3188 2413 164 55 9 chr17 74650439 74650879 -14853674 - MLT1C LTR MaLR -7 460 1 198 118 0 0 chr17 74651125 74651159 -14853394 + (T)n Simple_repeat Simple_repeat 1 34 0 324 0 0 0 chr17 74651212 74651248 -14853305 + (CA)n Simple_repeat Simple_repeat 2 37 0 1480 155 38 52 chr17 74651444 74651735 -14852818 + AluJo SINE Alu 1 287 -25 2201 104 6 28 chr17 74652332 74652650 -14851903 + AluSx SINE Alu 1 311 -1 334 284 42 0 chr17 74653236 74653331 -14851222 + L1ME LINE L1 5567 5665 -456 522 317 74 13 chr17 74653331 74653561 -14850992 - MIR SINE MIR -18 244 1 27 0 0 0 chr17 74653643 74653670 -14850883 + AT_rich Low_complexity Low_complexity 1 27 0 4481 72 12 2 chr17 74654552 74655110 -14849443 + L1PA10 LINE L1 5605 6168 0 516 294 59 6 chr17 74655446 74655616 -14848937 - MIR3 SINE MIR -7 201 23 227 317 138 8 chr17 74655831 74655954 -14848599 - L2 LINE L2 0 3272 3134 186 339 0 0 chr17 74657088 74657153 -14847400 + MIR SINE MIR 75 139 -69 2250 109 7 0 chr17 74657542 74657846 -14846707 + AluSg SINE Alu 1 306 -4 1017 271 61 55 chr17 74658090 74658419 -14846134 - MLT1E LTR MaLR -144 449 119 829 215 13 0 chr17 74658422 74658580 -14845973 - MLT1E LTR MaLR -433 160 1 855 277 112 58 chr17 74658823 74659307 -14845246 + LTR33 LTR ERVL 10 519 -2 308 273 65 11 chr17 74660684 74660790 -14843763 + MIR SINE MIR 28 140 -68 2076 121 0 0 chr17 74661002 74661327 -14843226 - AluSg SINE Alu 0 325 1 184 300 191 0 chr17 74661519 74661629 -14842924 - MIR SINE MIR 0 262 132 4568 145 27 39 chr17 74661695 74662587 -14841966 + L1MB8 LINE L1 5286 6172 -6 2167 113 14 0 chr17 74663273 74663566 -14840987 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 74663609 74663632 -14840921 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr17 74663914 74663951 -14840602 + AT_rich Low_complexity Low_complexity 1 37 0 352 283 20 20 chr17 74664052 74664151 -14840402 + L2 LINE L2 3215 3313 0 2429 112 58 30 chr17 74664310 74664409 -14840144 - Tigger2 DNA MER2_type -1 2707 2612 2096 115 3 19 chr17 74664409 74664722 -14839831 - AluSx SINE Alu -1 311 4 2429 112 58 30 chr17 74664722 74665086 -14839467 - Tigger2 DNA MER2_type -96 2612 2273 454 143 0 14 chr17 74665076 74665146 -14839407 - Tigger2 DNA MER2_type -2649 69 1 * 2032 191 15 25 chr17 74665158 74665562 -14838991 - L1MB5 LINE L1 0 6174 5775 232 154 62 31 chr17 74665931 74665996 -14838557 - MIR SINE MIR -24 238 172 938 231 146 17 chr17 74666119 74666184 -14838369 + MER58B DNA MER1_type 2 57 -2363 1655 167 30 23 chr17 74666184 74666483 -14838070 - AluJb SINE Alu -11 301 1 938 231 146 17 chr17 74666483 74666712 -14837841 + MER58B DNA MER1_type 57 334 -7 181 338 0 59 chr17 74666716 74666784 -14837769 + MIR3 SINE MIR 130 193 -15 209 331 60 8 chr17 74666805 74666938 -14837615 + L2 LINE L2 1319 1458 -1856 209 376 10 10 chr17 74667100 74667201 -14837352 - MIR SINE MIR -110 152 52 574 320 30 15 chr17 74667444 74667644 -14836909 - MIR SINE MIR -10 252 50 2170 132 0 0 chr17 74667651 74667946 -14836607 - AluSx SINE Alu -17 295 1 1592 185 64 44 chr17 74668156 74668562 -14835991 - L1MDa LINE L1 -4504 2036 1623 258 136 0 0 chr17 74668571 74668615 -14835938 + (TG)n Simple_repeat Simple_repeat 1 44 0 275 224 134 0 chr17 74668692 74668759 -14835794 - Tigger3(Golem) DNA MER2_type -2953 76 1 3304 218 118 14 chr17 74668814 74669675 -14834878 - L1MDa LINE L1 -4943 1597 647 616 284 32 11 chr17 74670343 74670533 -14834020 + MIR SINE MIR 54 247 -15 299 220 0 0 chr17 74671182 74671241 -14833312 + MER96 DNA MER1_type? 116 174 -1 358 277 75 37 chr17 74671953 74672141 -14832412 - LTR67 LTR ERVL -7 550 356 329 269 136 74 chr17 74672174 74672431 -14832122 - LTR67 LTR ERVL -283 274 2 2242 121 0 0 chr17 74672508 74672814 -14831739 - AluSq SINE Alu -2 311 6 564 288 94 24 chr17 74674076 74674288 -14830265 - MIR SINE MIR -7 255 29 2465 85 0 3 chr17 74674571 74674877 -14829676 - AluSq SINE Alu -8 305 1 2229 115 0 0 chr17 74674949 74675244 -14829309 - AluSx SINE Alu -17 295 1 850 208 64 0 chr17 74676678 74676851 -14827702 + MIR SINE MIR 7 190 -72 2424 28 7 3 chr17 74677088 74677511 -14827042 - AluY SINE Alu 0 424 1 2103 121 0 55 chr17 74677521 74677851 -14826702 - AluSx SINE Alu 0 312 1 262 368 40 23 chr17 74678557 74678731 -14825822 - L2 LINE L2 -230 3042 2866 410 293 40 46 chr17 74678773 74678947 -14825606 - MER63A DNA MER1_type 0 210 38 806 270 67 27 chr17 74679125 74679455 -14825098 - LTR16A LTR ERVL -16 434 92 201 320 80 55 chr17 74679545 74679700 -14824853 - L2 LINE L2 -654 2660 2497 895 236 18 23 chr17 74679700 74679920 -14824633 + MER20 DNA MER1_type 1 219 0 201 320 80 55 chr17 74679920 74679964 -14824589 - L2 LINE L2 -817 2497 2456 994 194 80 0 chr17 74680818 74681019 -14823534 - MER58A DNA MER1_type 0 224 8 853 189 31 0 chr17 74681369 74681528 -14823025 + MER5B DNA MER1_type 13 176 -2 2066 130 0 26 chr17 74681982 74682289 -14822264 - AluSg SINE Alu -11 299 1 23 0 0 0 chr17 74682626 74682649 -14821904 + AT_rich Low_complexity Low_complexity 1 23 0 728 292 122 42 chr17 74682793 74683220 -14821333 - MLT1L LTR MaLR -8 607 147 552 252 41 20 chr17 74683220 74683367 -14821186 - MER58C DNA MER1_type -1 214 65 400 248 8 43 chr17 74683394 74683450 -14821103 + MER81 DNA DNA 1 52 -62 2479 81 0 0 chr17 74683450 74683759 -14820794 - AluSq SINE Alu -4 309 1 400 248 8 43 chr17 74683759 74683819 -14820734 + MER81 DNA DNA 52 113 -1 292 145 0 101 chr17 74685081 74685150 -14819403 + MER5A DNA MER1_type 9 70 -119 529 114 0 0 chr17 74685156 74685226 -14819327 + AluJ/FLAM SINE Alu 1 70 -242 207 0 0 0 chr17 74685229 74685252 -14819301 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 862 159 35 0 chr17 74685252 74685429 -14819124 + FRAM SINE Alu 1 177 0 267 290 230 0 chr17 74685432 74685532 -14819021 + MER5A DNA MER1_type 67 189 0 231 167 0 42 chr17 74685614 74685647 -14818906 + CT-rich Low_complexity Low_complexity 4 36 -13 2018 135 3 0 chr17 74685647 74685951 -14818602 - AluSx SINE Alu -7 305 1 231 167 0 42 chr17 74685951 74685965 -14818588 + CT-rich Low_complexity Low_complexity 36 49 0 389 254 68 8 chr17 74685966 74686084 -14818469 + MER5A DNA MER1_type 63 187 -2 190 313 134 0 chr17 74686415 74686527 -14818026 + L2 LINE L2 1803 1929 -1385 2256 99 7 0 chr17 74687041 74687333 -14817220 + AluSx SINE Alu 14 307 -5 584 239 4 4 chr17 74687437 74687667 -14816886 + CT-rich Low_complexity Low_complexity 1 230 0 207 287 35 78 chr17 74687690 74687805 -14816748 - L2 LINE L2 -42 3271 3162 1727 172 17 0 chr17 74688204 74688495 -14816058 - AluJb SINE Alu -14 298 3 489 329 6 12 chr17 74688752 74688922 -14815631 - L3 LINE CR1 -258 1319 1151 868 90 0 0 chr17 74690410 74690521 -14814032 + AluY SINE Alu 1 111 -200 415 197 13 20 chr17 74690853 74691005 -14813548 + (TA)n Simple_repeat Simple_repeat 2 152 0 233 196 0 0 chr17 74691048 74691094 -14813459 - LTR66 LTR ERVL -171 439 394 510 147 0 0 chr17 74691119 74691194 -14813359 - AluSg/x SINE Alu -72 238 164 429 229 0 0 chr17 74691209 74691314 -14813239 + (TA)n Simple_repeat Simple_repeat 2 106 0 1811 80 0 4 chr17 74691360 74691586 -14812967 + AluSx SINE Alu 31 255 -57 22 0 0 0 chr17 74691634 74691656 -14812897 + AT_rich Low_complexity Low_complexity 1 22 0 1031 103 13 13 chr17 74691667 74691822 -14812731 - AluSg/x SINE Alu 0 312 158 408 252 98 0 chr17 74691824 74691947 -14812606 + MIR SINE MIR 112 246 -16 1918 136 0 57 chr17 74691951 74692268 -14812285 - AluSx SINE Alu -5 307 9 2255 91 0 0 chr17 74692317 74692604 -14811949 - AluSg SINE Alu -19 291 5 241 211 19 0 chr17 74692662 74692714 -14811839 + L2 LINE L2 3261 3313 0 182 261 0 22 chr17 74693046 74693092 -14811461 - L2 LINE L2 -4 3309 3265 2234 127 7 3 chr17 74693205 74693513 -14811040 - AluSq SINE Alu -4 309 1 1874 117 15 62 chr17 74693585 74693910 -14810643 + AluSx SINE Alu 1 310 -2 2062 128 26 7 chr17 74695354 74695660 -14808893 - AluSx SINE Alu 0 312 1 285 406 42 6 chr17 74695789 74695954 -14808599 + L2 LINE L2 2524 2694 -620 261 333 112 38 chr17 74695979 74696246 -14808307 - L2 LINE L2 -36 3277 2991 1228 55 0 0 chr17 74696264 74696409 -14808144 + MER107 DNA MER1_type 1 145 -52 197 83 28 0 chr17 74696409 74696445 -14808108 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 241 342 87 38 chr17 74696458 74696642 -14807911 - L2 LINE L2 -340 2974 2782 1119 229 123 44 chr17 74696676 74697042 -14807511 - MLT1E2 LTR MaLR -231 395 1 1989 148 0 10 chr17 74697078 74697389 -14807164 + AluSg SINE Alu 3 310 0 1854 139 3 33 chr17 74697507 74697808 -14806745 + AluJb SINE Alu 1 292 -20 384 255 133 11 chr17 74698076 74698264 -14806289 - L2 LINE L2 -1733 1581 1371 299 291 58 10 chr17 74698553 74698656 -14805897 + L2 LINE L2 3204 3311 -2 2407 180 21 7 chr17 74698844 74699267 -14805286 + L1PA16 LINE L1 5723 6151 -15 776 151 0 16 chr17 74699267 74699316 -14805237 + L1PB4 LINE L1 5723 6192 0 383 208 10 10 chr17 74699785 74699881 -14804672 + L1PA16 LINE L1 6061 6156 -10 3471 164 29 7 chr17 74699938 74700294 -14804259 + MER6A DNA MER2_type 1 377 -488 1886 153 0 26 chr17 74700294 74700601 -14803952 - AluJb SINE Alu -13 299 1 3471 164 29 7 chr17 74700601 74700836 -14803717 + MER6A DNA MER2_type 377 605 0 646 254 53 46 chr17 74700843 74701166 -14803387 + L1ME4a LINE L1 5793 6117 -4 376 274 10 0 chr17 74701896 74701998 -14802555 - MER94 DNA DNA -12 122 20 2697 33 0 0 chr17 74702759 74703062 -14801491 - AluY SINE Alu -8 303 1 518 222 20 116 chr17 74703237 74703530 -14801023 + MLT1L LTR MaLR 8 272 -343 770 195 78 130 chr17 74703611 74703981 -14800572 + L1MC4 LINE L1 6530 6880 -1162 1277 331 25 20 chr17 74704011 74704573 -14799980 - ERVL LTR ERVL -1103 4661 4097 287 298 69 8 chr17 74704712 74704843 -14799710 - LTR16C LTR ERVL -26 465 327 251 307 23 11 chr17 74705259 74705347 -14799206 + MIR SINE MIR 60 148 -114 2097 112 30 3 chr17 74706023 74706319 -14798234 - AluSq SINE Alu -9 304 1 23 0 0 0 chr17 74706802 74706825 -14797728 + AT_rich Low_complexity Low_complexity 1 23 0 1788 138 135 3 chr17 74706863 74707182 -14797371 + MER46B DNA MER2_type 1 236 0 1855 96 14 75 chr17 74707300 74707592 -14796961 - AluSx SINE Alu 0 312 39 28 29 0 0 chr17 74708366 74708401 -14796152 + AT_rich Low_complexity Low_complexity 1 35 0 3557 134 14 39 chr17 74708576 74709088 -14795465 - L1MB2 LINE L1 -3 6168 5671 2174 187 20 20 chr17 74709088 74709478 -14795075 - MLT1B LTR MaLR 0 390 1 3557 134 14 39 chr17 74709478 74709556 -14794997 - L1MB2 LINE L1 -500 5671 5593 1046 265 96 40 chr17 74710024 74710495 -14794058 - L1MC4a LINE L1 -1779 6029 5533 5605 192 36 22 chr17 74710613 74712717 -14791836 + L1MB8 LINE L1 4046 6172 -6 312 293 0 28 chr17 74714928 74715034 -14789519 + MIR SINE MIR 160 262 0 5212 128 78 12 chr17 74715564 74716513 -14788040 + L1PA16 LINE L1 5153 6154 -12 2433 100 3 0 chr17 74716533 74716842 -14787711 + AluSq SINE Alu 1 310 -3 258 224 0 0 chr17 74718173 74718231 -14786322 + L1M3 LINE L1 3895 3952 -2194 1174 205 151 69 chr17 74718243 74718310 -14786243 - MLT1D LTR MaLR -2 503 443 5518 90 14 3 chr17 74718310 74718747 -14785806 - L1PA12 LINE L1 0 6168 5737 2296 89 7 0 chr17 74718747 74719038 -14785515 - AluSx SINE Alu -19 293 1 5518 90 14 3 chr17 74719038 74719325 -14785228 - L1PA12 LINE L1 -431 5737 5454 234 0 0 0 chr17 74719325 74719351 -14785202 + (TTA)n Simple_repeat Simple_repeat 2 27 0 5518 90 14 3 chr17 74719351 74720097 -14784456 - L1PA12 LINE L1 -714 5454 4802 1174 205 151 69 chr17 74720097 74720493 -14784060 - MLT1D LTR MaLR -62 443 2 23 0 0 0 chr17 74720849 74720872 -14783681 + AT_rich Low_complexity Low_complexity 1 23 0 234 62 0 0 chr17 74720891 74720923 -14783630 + (TG)n Simple_repeat Simple_repeat 2 33 0 252 215 29 95 chr17 74720960 74721073 -14783480 + L1M3 LINE L1 5294 5384 -784 2249 122 0 0 chr17 74721073 74721376 -14783177 + AluSx SINE Alu 1 303 -9 252 215 29 95 chr17 74721376 74721445 -14783108 + L1M3 LINE L1 5384 5456 -712 281 220 231 44 chr17 74721582 74721764 -14782789 + L1MC5 LINE L1 7259 7474 -487 2187 142 0 0 chr17 74721810 74722121 -14782432 + AluSx SINE Alu 1 311 -1 2362 85 3 13 chr17 74722318 74722634 -14781919 + AluSp SINE Alu 1 313 0 2227 116 10 0 chr17 74722820 74723130 -14781423 - AluSq SINE Alu 0 313 1 697 206 67 36 chr17 74723138 74723361 -14781192 - L1MC5 LINE L1 -51 7910 7681 1437 79 5 5 chr17 74723866 74724056 -14780497 - AluSg/x SINE Alu -12 300 111 1606 77 5 5 chr17 74724056 74724263 -14780290 - AluSx SINE Alu -105 207 1 267 191 0 0 chr17 74724545 74724613 -14779940 + (CTA)n Simple_repeat Simple_repeat 1 68 0 292 356 96 37 chr17 74724763 74725033 -14779520 - L2 LINE L2 -81 3191 2906 221 0 0 33 chr17 74725874 74725904 -14778649 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr17 74726245 74726280 -14778273 + (CA)n Simple_repeat Simple_repeat 1 35 0 1418 208 33 15 chr17 74726288 74726683 -14777870 + MER54B LTR ERVL 484 793 0 393 322 82 6 chr17 74726920 74727103 -14777450 - MIR SINE MIR -13 249 53 205 231 60 99 chr17 74727263 74727445 -14777108 - L2 LINE L2 -87 3226 3052 190 287 176 9 chr17 74727571 74727679 -14776874 - L2 LINE L2 -214 3058 2933 2117 112 0 43 chr17 74727746 74728069 -14776484 + AluSx SINE Alu 1 309 -3 2230 112 0 3 chr17 74728069 74728372 -14776181 + AluSg SINE Alu 1 302 -8 21 0 0 0 chr17 74729513 74729534 -14775019 + AT_rich Low_complexity Low_complexity 1 21 0 226 254 45 45 chr17 74730917 74730984 -14773569 + L2 LINE L2 3180 3246 -26 332 248 28 20 chr17 74731389 74731498 -14773055 - MIR SINE MIR -56 206 99 328 333 83 6 chr17 74731619 74731775 -14772778 + MIR3 SINE MIR 16 183 -25 2411 82 0 0 chr17 74731864 74732167 -14772386 - AluY SINE Alu -6 305 3 2352 105 0 3 chr17 74732754 74733059 -14771494 + AluSx SINE Alu 1 304 -8 206 121 0 0 chr17 74733997 74734030 -14770523 + (T)n Simple_repeat Simple_repeat 1 33 0 213 121 0 0 chr17 74734535 74734568 -14769985 + (T)n Simple_repeat Simple_repeat 1 33 0 6960 230 51 36 chr17 74734716 74734927 -14769626 - L1MD2 LINE L1 -12 6347 6141 216 0 0 0 chr17 74734927 74734951 -14769602 + (TG)n Simple_repeat Simple_repeat 1 24 0 6960 230 51 36 chr17 74734951 74735636 -14768917 - L1MD2 LINE L1 -218 6141 5468 2244 92 0 46 chr17 74735636 74735961 -14768592 - AluSq SINE Alu -3 310 1 6960 230 51 36 chr17 74735961 74737424 -14767129 - L1MD2 LINE L1 -891 5468 3932 1915 152 0 13 chr17 74737424 74737740 -14766813 - AluJb SINE Alu 0 312 1 6960 230 51 36 chr17 74737740 74738566 -14765987 - L1MD2 LINE L1 -2427 3932 3120 24 32 0 0 chr17 74738659 74738690 -14765863 + AT_rich Low_complexity Low_complexity 1 31 0 205 321 47 19 chr17 74739167 74739273 -14765280 - MIR SINE MIR -64 198 90 406 306 16 8 chr17 74739279 74739403 -14765150 + MIR SINE MIR 3 127 -135 1319 122 0 5 chr17 74739403 74739592 -14764961 + AluSg/x SINE Alu 114 301 -11 270 299 13 0 chr17 74739613 74739690 -14764863 + MIR SINE MIR 171 248 -14 244 316 0 13 chr17 74739712 74739788 -14764765 - MIR SINE MIR -174 88 14 2372 97 3 0 chr17 74739923 74740231 -14764322 - AluSg SINE Alu -1 309 1 232 241 35 0 chr17 74740392 74740450 -14764103 + L2 LINE L2 3254 3313 0 330 330 46 9 chr17 74740981 74741090 -14763463 + MIR SINE MIR 31 143 -65 525 177 135 28 chr17 74741144 74741285 -14763268 - MER58C DNA MER1_type -4 211 56 2070 102 25 3 chr17 74741437 74741720 -14762833 + AluSx SINE Alu 11 299 -13 2480 79 0 0 chr17 74742146 74742451 -14762102 - AluSq SINE Alu -3 310 6 2435 81 0 0 chr17 74742755 74743051 -14761502 - AluSx SINE Alu -16 296 1 319 248 248 8 chr17 74743311 74743428 -14761125 + MIR3 SINE MIR 3 147 -61 3407 108 20 0 chr17 74743601 74744055 -14760498 - MER1A DNA MER1_type 0 529 67 486 288 26 13 chr17 74744126 74744279 -14760274 - MIR SINE MIR -17 245 91 267 266 48 77 chr17 74745457 74745505 -14759048 - L1MC5 LINE L1 -262 7699 7651 2184 100 0 4 chr17 74745505 74745819 -14758734 + AluSg SINE Alu 3 315 0 267 266 48 77 chr17 74745819 74745976 -14758577 - L1MC5 LINE L1 -310 7651 7499 22 0 0 0 chr17 74747794 74747816 -14756737 + AT_rich Low_complexity Low_complexity 1 22 0 280 274 0 0 chr17 74749063 74749125 -14755428 + MER5A DNA MER1_type 128 189 0 239 203 16 0 chr17 74749225 74749289 -14755264 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 243 0 0 0 chr17 74749401 74749428 -14755125 + (A)n Simple_repeat Simple_repeat 1 27 0 1442 115 0 0 chr17 74749453 74749644 -14754909 + AluSq SINE Alu 1 191 -122 1650 184 6 19 chr17 74750368 74750684 -14753869 + AluJo SINE Alu 1 312 0 1696 225 0 8 chr17 74751417 74751772 -14752781 - MLT1A1 LTR MaLR 0 365 14 255 319 43 64 chr17 74752740 74752881 -14751672 + MIR3 SINE MIR 23 160 -48 2051 125 37 67 chr17 74753048 74753423 -14751130 - THE1B LTR MaLR 0 364 1 485 288 71 75 chr17 74754458 74754725 -14749828 - L2 LINE L2 -89 3183 2918 2027 108 29 4 chr17 74755443 74755721 -14748832 + AluSq SINE Alu 16 300 -13 2400 106 0 3 chr17 74756171 74756483 -14748070 + AluSx SINE Alu 1 311 -1 510 286 11 17 chr17 74756707 74756882 -14747671 - MER5B DNA MER1_type 0 178 5 2569 58 0 10 chr17 74757092 74757405 -14747148 - AluY SINE Alu -1 310 1 1166 181 10 10 chr17 74757733 74757938 -14746615 + AluJb SINE Alu 107 311 -1 22 0 0 0 chr17 74757941 74757963 -14746590 + AT_rich Low_complexity Low_complexity 1 22 0 2032 124 7 33 chr17 74760526 74760833 -14743720 - AluSx SINE Alu -13 299 1 1187 181 9 5 chr17 74761588 74761804 -14742749 - MER20 DNA MER1_type 0 219 3 24 0 0 0 chr17 74762157 74762181 -14742372 + AT_rich Low_complexity Low_complexity 1 24 0 236 100 25 0 chr17 74762545 74762585 -14741968 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 1954 133 7 10 chr17 74762905 74763205 -14741348 + AluJb SINE Alu 1 299 -13 279 0 0 0 chr17 74763474 74763505 -14741048 + (CA)n Simple_repeat Simple_repeat 2 32 0 1917 144 0 14 chr17 74764390 74764705 -14739848 + AluJb SINE Alu 1 311 0 27 0 0 0 chr17 74765608 74765635 -14738918 + AT_rich Low_complexity Low_complexity 1 27 0 739 164 0 0 chr17 74765635 74765751 -14738802 - FLAM_A SINE Alu -14 128 13 899 230 4 44 chr17 74766405 74766631 -14737922 - MER58A DNA MER1_type -7 217 1 2302 92 0 0 chr17 74768576 74768869 -14735684 + AluY SINE Alu 1 293 -18 21 0 0 0 chr17 74769023 74769044 -14735509 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 74769723 74769744 -14734809 + AT_rich Low_complexity Low_complexity 1 21 0 456 207 62 112 chr17 74771488 74771667 -14732886 - MER5B DNA MER1_type -3 175 6 328 338 6 13 chr17 74772585 74772742 -14731811 + MARNA DNA Mariner 272 427 -159 252 246 31 0 chr17 74772808 74772873 -14731680 + MARNA DNA Mariner 458 524 -62 641 177 8 8 chr17 74773143 74773273 -14731280 - MER119 DNA MER1_type 0 583 454 2376 97 3 0 chr17 74773333 74773633 -14730920 + AluSq SINE Alu 1 301 -12 1278 177 5 14 chr17 74774880 74775100 -14729453 - MER58A DNA MER1_type -4 220 3 24 0 0 0 chr17 74778080 74778104 -14726449 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 74778155 74778177 -14726376 + AT_rich Low_complexity Low_complexity 1 22 0 1817 142 74 43 chr17 74781649 74782001 -14722552 - THE1B LTR MaLR -1 363 1 2116 142 0 13 chr17 74782035 74782351 -14722202 + AluSx SINE Alu 1 312 0 2292 105 0 3 chr17 74782382 74782687 -14721866 - AluSg SINE Alu -6 304 1 3919 75 9 13 chr17 74783210 74783753 -14720800 - L1PA10 LINE L1 0 6168 5628 394 232 159 16 chr17 74784336 74784654 -14719899 - MLT1H LTR MaLR 0 555 221 23 0 0 0 chr17 74784921 74784944 -14719609 + AT_rich Low_complexity Low_complexity 1 23 0 2314 100 3 0 chr17 74785302 74785603 -14718950 - AluSx SINE Alu -10 302 1 2281 104 6 3 chr17 74785640 74785967 -14718586 + L1PB2 LINE L1 5822 6149 -2 278 186 0 181 chr17 74786797 74786874 -14717679 - L1MA9 LINE L1 -24 6288 6265 3928 30 2 0 chr17 74786874 74787339 -14717214 - L1PA5 LINE L1 -3 6151 5686 278 186 0 181 chr17 74787339 74787454 -14717099 - L1MA9 LINE L1 -47 6265 6131 180 158 50 158 chr17 74787549 74787650 -14716903 - MER5B DNA MER1_type -9 169 80 197 139 0 70 chr17 74787557 74787600 -14716953 + MER5A DNA MER1_type 32 71 -118 1980 126 33 10 chr17 74787874 74788175 -14716378 - AluSx SINE Alu -4 308 1 1897 127 0 29 chr17 74789319 74789627 -14714926 + AluJb SINE Alu 1 299 -13 469 276 40 35 chr17 74789674 74789848 -14714705 + MIR SINE MIR 88 262 0 351 0 0 0 chr17 74790256 74790295 -14714258 + (T)n Simple_repeat Simple_repeat 1 39 0 2316 106 0 3 chr17 74790372 74790683 -14713870 - AluSx SINE Alu -2 310 1 22 56 0 0 chr17 74790685 74790721 -14713832 + AT_rich Low_complexity Low_complexity 1 36 0 2106 122 42 33 chr17 74790788 74791148 -14713405 + THE1B LTR MaLR 1 363 -1 180 0 0 0 chr17 74791274 74791294 -14713259 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 357 145 0 0 chr17 74791296 74791372 -14713181 + (TC)n Simple_repeat Simple_repeat 1 76 0 2440 43 13 0 chr17 74791372 74791676 -14712877 - AluY SINE Alu -3 308 1 2182 103 27 7 chr17 74792010 74792311 -14712242 + AluSx SINE Alu 1 307 -5 289 313 60 22 chr17 74792367 74792501 -14712052 - MIR SINE MIR -63 199 61 316 172 0 0 chr17 74793084 74793142 -14711411 + L1PA16 LINE L1 6099 6156 -10 187 145 0 48 chr17 74795434 74795496 -14709057 + (TTATA)n Simple_repeat Simple_repeat 2 60 0 304 185 16 65 chr17 74795515 74795699 -14708854 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 415 149 60 24 chr17 74795571 74795739 -14708814 + (TA)n Simple_repeat Simple_repeat 1 174 0 239 187 53 0 chr17 74795782 74795858 -14708695 + (TATAA)n Simple_repeat Simple_repeat 1 80 0 2300 82 3 16 chr17 74797020 74797335 -14707218 - AluSx SINE Alu -1 311 1 404 327 115 2 chr17 74797626 74797809 -14706744 + MIR SINE MIR 47 248 -14 392 303 96 27 chr17 74797873 74798061 -14706492 - MIR SINE MIR -48 214 14 2209 120 0 0 chr17 74798663 74798964 -14705589 - AluSx SINE Alu -11 301 1 2071 88 73 4 chr17 74799940 74800213 -14704340 + AluSc SINE Alu 6 297 -12 668 200 6 0 chr17 74800580 74800740 -14703813 + C-rich Low_complexity Low_complexity 2 162 0 232 242 44 0 chr17 74801414 74801505 -14703048 + A-rich Low_complexity Low_complexity 3 97 0 396 316 39 29 chr17 74801774 74802084 -14702469 - L1ME LINE L1 -299 5822 5510 2137 74 0 54 chr17 74803867 74804225 -14700328 + AluY SINE Alu 1 342 0 185 343 0 43 chr17 74806335 74806405 -14698148 - L2 LINE L2 -13 3300 3234 445 299 204 0 chr17 74807008 74807219 -14697334 + MIR SINE MIR 6 259 -3 360 0 0 0 chr17 74808485 74808525 -14696028 + (TG)n Simple_repeat Simple_repeat 2 41 0 229 229 8 123 chr17 74808559 74808681 -14695872 + MIR SINE MIR 104 211 -51 432 306 107 39 chr17 74809995 74810131 -14694422 - L1ME LINE L1 -400 5721 5596 840 183 52 11 chr17 74810131 74810322 -14694231 - L1MA8 LINE L1 -13 6278 6080 432 306 107 39 chr17 74810322 74810741 -14693812 - L1ME LINE L1 -525 5596 5101 2127 83 47 0 chr17 74812147 74812424 -14692129 - AluSp SINE Alu -22 291 2 32 0 0 0 chr17 74812482 74812514 -14692039 + AT_rich Low_complexity Low_complexity 1 32 0 814 283 40 76 chr17 74812549 74812969 -14691584 - L2 LINE L2 0 3313 2909 746 155 8 0 chr17 74812977 74813106 -14691447 + MLT2D LTR ERVL 1 130 -284 5351 110 1 20 chr17 74813106 74813944 -14690609 + L1PA16 LINE L1 5332 6153 -13 1507 184 7 14 chr17 74813961 74814254 -14690299 + MLT2D LTR ERVL 124 414 0 2278 75 0 3 chr17 74814468 74814776 -14689777 - AluSg SINE Alu 0 307 1 196 385 0 21 chr17 74815292 74815388 -14689165 - MIR SINE MIR -111 151 58 23 0 0 0 chr17 74815515 74815538 -14689015 + AT_rich Low_complexity Low_complexity 1 23 0 200 200 0 0 chr17 74815552 74815587 -14688966 + (TG)n Simple_repeat Simple_repeat 1 35 0 2078 108 7 7 chr17 74815630 74815925 -14688628 - AluSg SINE Alu -15 295 1 247 260 161 29 chr17 74817045 74817293 -14687260 + MLT1J2 LTR MaLR 2 297 -153 3113 158 86 13 chr17 74817473 74818164 -14686389 - LTR1B LTR ERV1 0 785 30 654 157 66 25 chr17 74818699 74818820 -14685733 - FLAM_A SINE Alu -7 126 1 922 204 57 4 chr17 74818824 74819109 -14685444 - L1MD3 LINE L1 -6 8036 7740 688 244 17 22 chr17 74819119 74819299 -14685254 + MER58A DNA MER1_type 30 208 -16 1825 244 39 12 chr17 74819314 74819875 -14684678 - L1MC4 LINE L1 -295 7747 7172 2324 96 3 0 chr17 74819880 74820173 -14684380 - AluSg SINE Alu -16 294 1 820 91 0 0 chr17 74820200 74820299 -14684254 + AluSg SINE Alu 11 109 -201 782 113 24 24 chr17 74820347 74820515 -14684038 + CT-rich Low_complexity Low_complexity 4 171 0 253 248 47 16 chr17 74820548 74820677 -14683876 - L1MC4a LINE L1 -781 7027 6895 244 288 12 12 chr17 74820742 74820822 -14683731 + L2 LINE L2 3227 3306 -7 384 227 17 48 chr17 74822927 74823104 -14681449 - MIR SINE MIR -11 251 31 418 193 88 20 chr17 74823207 74823505 -14681048 + LTR28 LTR ERV1 1 414 -565 1366 216 107 11 chr17 74823521 74824091 -14680462 + LTR28 LTR ERV1 349 1020 0 582 227 109 0 chr17 74824330 74824458 -14680095 + FLAM_C SINE Alu 2 143 0 400 288 51 8 chr17 74824924 74825042 -14679511 - L2 LINE L2 0 3313 3191 344 249 28 173 chr17 74825136 74825425 -14679128 - MIR SINE MIR -14 248 2 1952 128 55 30 chr17 74827064 74827430 -14677123 + THE1C LTR MaLR 1 375 0 387 309 115 24 chr17 74828220 74828385 -14676168 + L2 LINE L2 2901 3080 -233 245 286 0 11 chr17 74828545 74828586 -14675967 + (CATA)n Simple_repeat Simple_repeat 2 42 -49 2345 58 0 14 chr17 74828586 74828879 -14675674 - AluY SINE Alu -22 289 1 245 286 0 11 chr17 74828879 74828928 -14675625 + (CATA)n Simple_repeat Simple_repeat 42 91 0 807 237 17 12 chr17 74828929 74829102 -14675451 - MER45A DNA AcHobo 0 178 5 1663 189 40 3 chr17 74829275 74829571 -14674982 + AluSx SINE Alu 3 309 -3 2258 113 3 3 chr17 74829721 74830030 -14674523 - AluSg SINE Alu -1 309 1 483 317 74 5 chr17 74830218 74830420 -14674133 - MIR SINE MIR 0 262 47 502 311 83 25 chr17 74830438 74830715 -14673838 + MLT1H LTR MaLR 18 310 -239 290 424 33 39 chr17 74830715 74830864 -14673689 - L2 LINE L2 -78 3194 3046 309 26 0 0 chr17 74830864 74830902 -14673651 + (TG)n Simple_repeat Simple_repeat 2 39 0 290 424 33 39 chr17 74830902 74831059 -14673494 - L2 LINE L2 -226 3046 2890 2408 91 0 0 chr17 74831210 74831506 -14673047 - AluSg SINE Alu -14 296 1 1181 216 101 41 chr17 74831569 74831625 -14672928 - MLT1C LTR MaLR 0 467 416 1597 59 0 0 chr17 74831625 74831827 -14672726 + L1PA5 LINE L1 5953 6154 0 1181 216 101 41 chr17 74831827 74832206 -14672347 - MLT1C LTR MaLR -51 416 6 26 30 0 0 chr17 74832242 74832275 -14672278 + AT_rich Low_complexity Low_complexity 1 33 0 280 283 16 89 chr17 74833787 74833978 -14670575 - MER34B LTR ERV1 -189 376 200 1569 161 32 85 chr17 74834019 74834397 -14670156 + MER57A LTR ERV1 46 403 0 519 158 45 64 chr17 74834397 74834540 -14670013 - MER34B LTR ERV1 -388 154 1 199 465 0 0 chr17 74836388 74836474 -14668079 + L2 LINE L2 3161 3246 -26 772 201 106 15 chr17 74837201 74837400 -14667153 - MER20 DNA MER1_type -2 217 1 2008 107 79 25 chr17 74837687 74838043 -14666510 - THE1C LTR MaLR 0 375 1 2668 111 32 44 chr17 74838299 74838691 -14665862 + MSTA LTR MaLR 1 389 -39 1810 173 40 0 chr17 74838691 74838991 -14665562 - AluSx SINE Alu 0 312 1 2668 111 32 44 chr17 74838991 74839031 -14665522 + MSTA LTR MaLR 389 428 0 968 191 9 26 chr17 74839196 74839427 -14665126 + L1MB1 LINE L1 5941 6167 -1 42460 35 2 2 chr17 74839538 74845694 -14658859 - L1PA3 LINE L1 -3 6152 1 358 258 117 0 chr17 74845901 74846029 -14658524 - MIR SINE MIR -64 198 56 2153 121 0 3 chr17 74846300 74846597 -14657956 - AluSq SINE Alu -17 296 1 1360 304 42 27 chr17 74846976 74847636 -14656917 - HERV16 LTR ERVL -3594 1402 733 733 230 136 112 chr17 74847644 74847692 -14656861 - MLT1D LTR MaLR 0 505 460 2011 92 0 8 chr17 74847692 74847953 -14656600 + AluSc SINE Alu 51 309 0 733 230 136 112 chr17 74847953 74848234 -14656319 - MLT1D LTR MaLR -45 460 168 5572 147 29 18 chr17 74848252 74850057 -14654496 - L1MA4A LINE L1 -12 6291 4466 592 209 23 0 chr17 74850065 74850194 -14654359 - MLT1D LTR MaLR -347 158 27 493 314 126 29 chr17 74850454 74850875 -14653678 - LTR16B LTR ERVL -2 462 1 2192 125 0 16 chr17 74850915 74851228 -14653325 + AluY SINE Alu 1 308 -3 735 221 34 0 chr17 74851230 74851403 -14653150 + AluSg/x SINE Alu 128 305 0 337 273 161 21 chr17 74852500 74852643 -14651910 - MIR SINE MIR -34 228 66 1398 240 64 54 chr17 74853025 74853558 -14650995 - MLT1F LTR MaLR 0 542 5 183 100 0 0 chr17 74854135 74854165 -14650388 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1555 188 7 14 chr17 74854169 74854451 -14650102 - AluJo SINE Alu -31 281 2 3872 195 26 47 chr17 74854600 74854643 -14649910 + L1MB7 LINE L1 4867 4909 -1275 2384 70 0 19 chr17 74854643 74854955 -14649598 + AluY SINE Alu 3 308 -3 3872 195 26 47 chr17 74854955 74855659 -14648894 + L1MB7 LINE L1 4909 5627 -557 1974 134 38 3 chr17 74855659 74855945 -14648608 + AluSx SINE Alu 1 297 -10 207 0 0 0 chr17 74855945 74855968 -14648585 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 3872 195 26 47 chr17 74855973 74856143 -14648410 + L1MB7 LINE L1 5627 5799 -385 2463 82 0 0 chr17 74856143 74856448 -14648105 - AluSc SINE Alu -3 306 2 3872 195 26 47 chr17 74856448 74856867 -14647686 + L1MB7 LINE L1 5799 6183 -1 1851 198 0 0 chr17 74857008 74857316 -14647237 - AluJb SINE Alu -2 310 3 24 0 0 0 chr17 74857742 74857766 -14646787 + AT_rich Low_complexity Low_complexity 1 24 0 1646 271 71 48 chr17 74858286 74858772 -14645781 + L1MC4 LINE L1 6829 7341 -701 3374 79 5 5 chr17 74858772 74859216 -14645337 + MLT2A1 LTR ERVL 1 444 0 1646 271 71 48 chr17 74859216 74859520 -14645033 + L1MC4 LINE L1 7341 7637 -405 699 163 35 0 chr17 74859505 74859646 -14644907 + L1MA8 LINE L1 5478 5623 -668 * 7481 44 0 6 chr17 74859644 74860631 -14643922 - L1PA5 LINE L1 -900 5246 4266 7559 31 0 1 chr17 74860631 74861572 -14642981 + L1PA5 LINE L1 5219 6154 0 2584 163 31 0 chr17 74861572 74862050 -14642503 + L1MA8 LINE L1 5608 6100 -191 738 268 19 80 chr17 74862048 74862511 -14642042 + L1MC4 LINE L1 7608 8042 0 * 870 336 86 42 chr17 74863133 74863891 -14640662 - L2 LINE L2 -584 2730 1940 531 340 0 25 chr17 74863885 74864044 -14640509 - MIR SINE MIR -95 167 13 * 1262 223 49 55 chr17 74864214 74864831 -14639722 - MLT1E2 LTR MaLR -6 620 8 249 57 0 0 chr17 74865398 74865433 -14639120 + (GA)n Simple_repeat Simple_repeat 2 36 0 322 225 31 158 chr17 74865918 74866066 -14638487 + MIR SINE MIR 37 168 -40 418 335 24 19 chr17 74866443 74866655 -14637898 - MLT1I LTR MaLR 0 409 197 275 179 56 36 chr17 74866797 74866902 -14637651 - MLT1J2 LTR MaLR -19 523 347 212 312 123 41 chr17 74867251 74867421 -14637132 + L2 LINE L2 2720 2903 -411 240 122 0 0 chr17 74868370 74868411 -14636142 + (TG)n Simple_repeat Simple_repeat 2 42 0 1941 178 5 24 chr17 74868460 74868836 -14635717 - MLT2D LTR ERVL -45 369 1 524 186 62 40 chr17 74869736 74869751 -14634802 + L1 LINE L1 4151 4164 -1982 1099 93 0 12 chr17 74869751 74869913 -14634640 + L1PA7 LINE L1 5995 6154 0 524 186 62 40 chr17 74869913 74870074 -14634479 + L1 LINE L1 4164 4331 -1815 1392 130 19 0 chr17 74870084 74870292 -14634261 - AluSg/x SINE Alu -2 310 99 2607 58 0 0 chr17 74870307 74870616 -14633937 + AluY SINE Alu 1 309 -2 312 293 43 43 chr17 74871458 74871574 -14632979 + MER5B DNA MER1_type 12 127 -51 1448 77 0 57 chr17 74871588 74871797 -14632756 + MER107 DNA MER1_type 1 197 0 267 195 76 0 chr17 74871837 74871923 -14632630 - MIR SINE MIR -64 144 45 24 0 0 0 chr17 74871934 74871958 -14632595 + AT_rich Low_complexity Low_complexity 1 24 0 2313 88 0 7 chr17 74872189 74872495 -14632058 - AluSc SINE Alu -3 306 3 23 33 0 0 chr17 74872504 74872534 -14632019 + AT_rich Low_complexity Low_complexity 1 30 0 807 212 32 14 chr17 74872731 74873093 -14631460 - L1MD3 LINE L1 -313 7682 7135 2454 94 0 0 chr17 74873270 74873578 -14630975 + AluSc SINE Alu 1 308 -1 1038 149 0 0 chr17 74873580 74874015 -14630538 + (TA)n Simple_repeat Simple_repeat 1 435 0 287 307 80 0 chr17 74874019 74874156 -14630397 - MIR SINE MIR -1 261 114 296 288 38 50 chr17 74874691 74874851 -14629702 - MLT1J LTR MaLR -6 505 348 414 93 196 52 chr17 74875035 74875132 -14629421 - L1MA10 LINE L1 -11 6323 6213 1732 114 37 82 chr17 74875144 74875521 -14629032 + THE1C LTR MaLR 14 373 -2 710 190 7 0 chr17 74875534 74875676 -14628877 - L1MB1 LINE L1 -2 6187 6045 415 301 68 29 chr17 74875904 74875942 -14628611 - MIR3 SINE MIR -13 249 214 1826 197 0 0 chr17 74875942 74876252 -14628301 - AluJo SINE Alu -2 310 1 415 301 68 29 chr17 74876252 74876452 -14628101 - MIR3 SINE MIR -48 214 2 3602 170 44 68 chr17 74877163 74877878 -14626675 - L1MB4 LINE L1 0 6180 5486 220 27 54 0 chr17 74877878 74877915 -14626638 + (TTG)n Simple_repeat Simple_repeat 2 40 0 3602 170 44 68 chr17 74877915 74878129 -14626424 - L1MB4 LINE L1 -694 5486 5268 2133 118 3 0 chr17 74878131 74878418 -14626135 - AluSg SINE Alu -22 288 1 1179 244 80 9 chr17 74878607 74878931 -14625622 + LTR16C LTR ERVL 142 488 -3 268 163 0 0 chr17 74879375 74879418 -14625135 - MIR SINE MIR -103 159 117 649 280 303 14 chr17 74879510 74879942 -14624611 + L3 LINE CR1 644 1200 -377 397 285 49 8 chr17 74879979 74880102 -14624451 + MIR SINE MIR 26 153 -109 397 250 106 30 chr17 74880195 74880222 -14624331 + L3 LINE CR1 1249 1273 -304 2559 115 3 8 chr17 74880222 74880588 -14623965 - THE1B LTR MaLR 0 364 1 397 250 106 30 chr17 74880588 74880692 -14623861 + L3 LINE CR1 1273 1390 -187 879 325 106 47 chr17 74880728 74881407 -14623146 + L2 LINE L2 2254 2972 -342 450 344 26 36 chr17 74881577 74881769 -14622784 + L3 LINE CR1 1382 1571 -6 230 196 22 0 chr17 74881845 74881891 -14622662 + GA-rich Low_complexity Low_complexity 2 48 0 202 287 12 134 chr17 74883656 74883820 -14620733 + MIR SINE MIR 2 145 -63 25 0 0 0 chr17 74884013 74884038 -14620515 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr17 74884213 74884242 -14620311 + AT_rich Low_complexity Low_complexity 1 29 0 2617 179 40 61 chr17 74885014 74885355 -14619198 - L1MC3 LINE L1 -1 7784 7463 1980 135 0 46 chr17 74885355 74885682 -14618871 - AluSx SINE Alu 0 312 1 2617 179 40 61 chr17 74885682 74886032 -14618521 - L1MC3 LINE L1 -322 7463 7107 1501 209 6 67 chr17 74886082 74886270 -14618283 + MER21B LTR ERV1 12 171 -692 2204 129 3 0 chr17 74886270 74886581 -14617972 - AluSx SINE Alu 0 312 1 1501 209 6 67 chr17 74886581 74886737 -14617816 + MER21B LTR ERV1 171 335 -528 893 249 26 9 chr17 74886751 74886980 -14617573 - LTR31 LTR ERV1 0 619 387 646 98 131 25 chr17 74886988 74887110 -14617443 + Tigger2 DNA MER2_type 2358 2492 -226 2188 171 42 2 chr17 74887114 74887517 -14617036 - MSTB LTR MaLR -7 419 1 923 245 4 38 chr17 74887537 74887802 -14616751 - LTR31 LTR ERV1 -249 370 115 1648 234 39 34 chr17 74887915 74888380 -14616173 + MER21B LTR ERV1 346 812 -51 395 183 42 42 chr17 74888430 74888509 -14616044 - L1MC3 LINE L1 -741 7044 6963 1730 151 50 107 chr17 74888509 74888967 -14615586 + Tigger2a DNA MER2_type 1 432 -2 395 183 42 42 chr17 74888967 74889007 -14615546 - L1MC3 LINE L1 -821 6964 6925 2316 82 17 0 chr17 74889096 74889390 -14615163 + AluSq SINE Alu 1 299 -14 225 0 0 0 chr17 74889756 74889781 -14614772 + (T)n Simple_repeat Simple_repeat 1 25 0 2313 98 0 0 chr17 74890232 74890528 -14614025 - AluSq SINE Alu -17 296 1 345 299 53 103 chr17 74890691 74890992 -14613561 + L1ME LINE L1 201 486 -5584 1916 257 108 41 chr17 74890995 74891437 -14613116 + L1ME LINE L1 392 803 -5370 1745 162 22 0 chr17 74891437 74891715 -14612838 + AluJb SINE Alu 24 307 -5 1916 257 108 41 chr17 74891715 74893004 -14611549 + L1ME LINE L1 803 2263 -3910 1956 245 65 6 chr17 74893020 74893800 -14610753 + L1ME LINE L1 2492 3317 -2763 448 193 11 97 chr17 74893816 74893992 -14610561 - L1MA9 LINE L1 -30 6282 6122 1141 191 34 4 chr17 74893992 74894227 -14610326 + MLT1D LTR MaLR 264 505 0 3012 249 24 32 chr17 74894595 74894865 -14609688 + L1ME LINE L1 3307 3578 -2502 2349 100 3 0 chr17 74894865 74895175 -14609378 + AluY SINE Alu 1 311 0 3012 249 24 32 chr17 74895175 74895491 -14609062 + L1ME LINE L1 3578 3895 -2185 2046 113 31 3 chr17 74895491 74895784 -14608769 - AluSx SINE Alu -11 301 1 3012 249 24 32 chr17 74895784 74896251 -14608302 + L1ME LINE L1 3895 4352 -1728 313 375 6 0 chr17 74896624 74896792 -14607761 + (TG)n Simple_repeat Simple_repeat 1 169 0 500 280 26 32 chr17 74897374 74897563 -14606990 + MER5A DNA MER1_type 1 188 -1 22 0 0 0 chr17 74897786 74897808 -14606745 + AT_rich Low_complexity Low_complexity 1 22 0 5025 77 11 0 chr17 74898216 74898878 -14605675 - L1PA10 LINE L1 -4 6164 5496 589 238 152 0 chr17 74898882 74899033 -14605520 - MER5A DNA MER1_type -3 186 13 204 204 0 0 chr17 74900368 74900412 -14604141 + CT-rich Low_complexity Low_complexity 2 45 0 365 102 17 0 chr17 74901405 74901464 -14603089 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 2244 130 0 0 chr17 74901464 74901765 -14602788 - AluSx SINE Alu -11 301 1 1437 174 90 6 chr17 74901911 74902222 -14602331 - MER58B DNA MER1_type 0 341 5 2369 55 0 51 chr17 74903316 74903627 -14600926 - AluY SINE Alu -16 295 1 1749 232 85 61 chr17 74903711 74904633 -14599920 - L1MC5 LINE L1 -50 7911 6968 1380 295 90 59 chr17 74904733 74906327 -14598226 - L1MC4a LINE L1 -869 6939 5296 35 24 0 0 chr17 74906357 74906399 -14598154 + AT_rich Low_complexity Low_complexity 1 42 0 296 310 29 20 chr17 74906572 74906856 -14597697 - L1MC4a LINE L1 -1127 5019 4733 437 272 230 14 chr17 74907776 74907989 -14596564 - MIR SINE MIR 0 262 4 231 333 0 14 chr17 74908029 74908098 -14596455 - L2 LINE L2 -43 3229 3162 346 70 28 28 chr17 74908196 74908267 -14596286 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 375 318 68 0 chr17 74908277 74908409 -14596144 + L2 LINE L2 2211 2351 -963 282 349 8 0 chr17 74908424 74908550 -14596003 - L2 LINE L2 -1389 1925 1799 3535 119 6 0 chr17 74908705 74909233 -14595320 - L1PA15 LINE L1 -12 6804 6274 7700 17 6 1 chr17 74909233 74910186 -14594367 + L1PA3 LINE L1 5198 6154 -1 13650 214 56 26 chr17 74910196 74910450 -14594103 - L1PA15 LINE L1 -540 6276 6031 1740 193 3 0 chr17 74910450 74910746 -14593807 - AluJb SINE Alu -15 297 1 13650 214 56 26 chr17 74910746 74912802 -14591751 - L1PA15 LINE L1 -785 6031 4037 890 141 0 15 chr17 74912802 74912937 -14591616 - FLAM_C SINE Alu 0 133 1 13650 214 56 26 chr17 74912937 74913009 -14591544 - L1PA15 LINE L1 -2779 4037 3969 1957 156 14 0 chr17 74913009 74913292 -14591261 - AluSx SINE Alu -13 299 13 13650 214 56 26 chr17 74913292 74915915 -14588638 - L1PA15 LINE L1 -2847 3969 1114 494 330 66 0 chr17 74916107 74916304 -14588249 - MIR SINE MIR 0 262 53 228 341 170 45 chr17 74916391 74916749 -14587804 - L2 LINE L2 -374 2940 2538 1114 271 104 89 chr17 74916816 74917283 -14587270 + HAL1 LINE L1 1508 1966 -541 189 74 0 0 chr17 74917283 74917310 -14587243 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 1114 271 104 89 chr17 74917310 74917820 -14586733 + HAL1 LINE L1 1966 2500 -7 21 0 0 0 chr17 74918482 74918503 -14586050 + AT_rich Low_complexity Low_complexity 1 21 0 208 245 0 0 chr17 74919617 74919670 -14584883 + MIR SINE MIR 170 222 -40 419 274 39 7 chr17 74919671 74919824 -14584729 - MLT1H LTR MaLR 0 549 392 577 303 54 29 chr17 74920402 74920643 -14583910 + MIR SINE MIR 16 262 0 29 28 0 0 chr17 74920748 74920784 -14583769 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr17 74921495 74921524 -14583029 + AT_rich Low_complexity Low_complexity 1 29 0 2041 37 0 0 chr17 74922398 74922641 -14581912 + L1PA4 LINE L1 5907 6149 -6 266 309 0 8 chr17 74922691 74922814 -14581739 + (TA)n Simple_repeat Simple_repeat 1 122 0 2769 100 30 55 chr17 74922880 74922969 -14581584 - MER83 LTR ERV1 0 448 358 2572 57 0 16 chr17 74922969 74923285 -14581268 + AluY SINE Alu 1 311 0 2769 100 30 55 chr17 74923285 74923654 -14580899 - MER83 LTR ERV1 -90 358 1 233 211 184 28 chr17 74924087 74924196 -14580357 - MLT1L LTR MaLR -32 583 458 235 313 76 78 chr17 74924734 74924881 -14579672 - MLT1L LTR MaLR -153 462 316 2522 113 6 0 chr17 74924881 74925234 -14579319 - THE1A LTR MaLR 0 355 1 11921 84 9 5 chr17 74925234 74926807 -14577746 - THE1A-int LTR MaLR 0 1580 1 2609 99 3 0 chr17 74926808 74927161 -14577392 - THE1A LTR MaLR -1 354 1 235 313 76 78 chr17 74927161 74927457 -14577096 - MLT1L LTR MaLR -297 318 17 2185 121 33 36 chr17 74927718 74928083 -14576470 + THE1B LTR MaLR 1 364 0 2344 97 11 181 chr17 74928764 74929310 -14575243 - MLT2A2 LTR ERVL 0 453 1 233 255 0 0 chr17 74929354 74929405 -14575148 + MIR SINE MIR 104 154 -108 762 173 0 27 chr17 74929577 74929727 -14574826 - Tigger7 DNA MER2_type 0 2487 2342 1811 195 6 0 chr17 74929729 74930067 -14574486 - Tigger7 DNA MER2_type -393 340 1 1741 201 127 11 chr17 74930246 74930288 -14574265 - MLT2B1 LTR ERVL -1 519 483 276 77 0 0 chr17 74930288 74930327 -14574226 + (TG)n Simple_repeat Simple_repeat 2 40 0 1741 201 127 11 chr17 74930327 74930747 -14573806 - MLT2B1 LTR ERVL -37 483 3 1754 96 64 8 chr17 74930880 74931130 -14573423 - AluSq SINE Alu -16 297 34 800 215 0 19 chr17 74931861 74932019 -14572534 - AluSg/x SINE Alu -20 290 136 271 351 19 62 chr17 74932075 74932334 -14572219 + L2 LINE L2 2827 3074 -198 634 172 78 0 chr17 74932884 74933076 -14571477 + Charlie1 DNA MER1_type 2454 2660 -101 281 336 20 14 chr17 74933082 74933228 -14571325 - HERV16 LTR ERVL -969 4795 4649 * 415 352 35 38 chr17 74933218 74933613 -14570940 - HERV16 LTR ERVL -3837 1159 766 640 314 28 4 chr17 74934429 74934681 -14569872 - LTR16C LTR ERVL -21 470 213 240 122 0 0 chr17 74935939 74935980 -14568573 + (TC)n Simple_repeat Simple_repeat 1 41 0 2265 98 14 0 chr17 74935980 74936277 -14568276 - AluSx SINE Alu -11 301 1 494 236 58 44 chr17 74936478 74936703 -14567850 - L1MA7 LINE L1 0 6291 6064 216 0 0 0 chr17 74938830 74938854 -14565699 + (A)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr17 74939487 74939512 -14565041 + AT_rich Low_complexity Low_complexity 1 25 0 511 308 70 0 chr17 74941264 74941436 -14563117 + MIR SINE MIR 6 189 -73 423 257 67 0 chr17 74941458 74941563 -14562990 + L2 LINE L2 3202 3313 0 254 270 27 0 chr17 74941549 74941623 -14562930 + MIR SINE MIR 184 259 -3 * 1494 120 31 9 chr17 74941949 74942174 -14562379 + MER30 DNA MER1_type 1 230 0 25 31 0 0 chr17 74942217 74942249 -14562304 + AT_rich Low_complexity Low_complexity 1 32 0 284 321 127 0 chr17 74942755 74942889 -14561664 - MIR SINE MIR -53 209 59 316 295 72 36 chr17 74942928 74943233 -14561320 - L1MC5 LINE L1 -35 7926 7611 1982 137 53 8 chr17 74943425 74943784 -14560769 - THE1C LTR MaLR 0 375 1 241 222 156 56 chr17 74944550 74944640 -14559913 - MER45A DNA AcHobo 0 178 80 21 36 0 0 chr17 74947622 74947650 -14556903 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr17 74947964 74947994 -14556559 + AT_rich Low_complexity Low_complexity 1 30 0 248 319 97 9 chr17 74948074 74948187 -14556366 - MIR SINE MIR -111 151 29 250 138 35 0 chr17 74948552 74948610 -14555943 + CT-rich Low_complexity Low_complexity 1 60 0 311 275 0 0 chr17 74949098 74949167 -14555386 - L2 LINE L2 0 3313 3245 1609 187 3 28 chr17 74949189 74949478 -14555075 + AluJo SINE Alu 1 282 -30 519 17 0 0 chr17 74949776 74949836 -14554717 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 744 43 0 0 chr17 74949976 74950068 -14554485 + (TCTA)n Simple_repeat Simple_repeat 2 93 0 517 281 52 13 chr17 74950599 74950752 -14553801 + MIR3 SINE MIR 40 198 -10 350 313 64 52 chr17 74950877 74951100 -14553453 + MIR SINE MIR 19 244 -18 202 333 11 0 chr17 74951657 74951747 -14552806 + A-rich Low_complexity Low_complexity 3 93 0 361 236 25 70 chr17 74951932 74952089 -14552464 + MER5A DNA MER1_type 19 168 -21 22 70 0 0 chr17 74953712 74953755 -14550798 + AT_rich Low_complexity Low_complexity 1 43 0 1688 243 109 33 chr17 74954223 74954774 -14549779 - MLT1E LTR MaLR 0 593 1 222 171 0 0 chr17 74954837 74954878 -14549675 + GA-rich Low_complexity Low_complexity 5 45 0 4482 175 23 23 chr17 74955002 74955878 -14548675 - L1MB2 LINE L1 -3 6168 5293 21 0 0 0 chr17 74956799 74956820 -14547733 + AT_rich Low_complexity Low_complexity 1 21 0 887 261 176 16 chr17 74958075 74958451 -14546102 - MLT1G1 LTR MaLR -22 573 138 317 305 21 21 chr17 74958954 74959049 -14545504 - MIR SINE MIR -57 151 57 507 319 63 83 chr17 74959064 74959707 -14544846 - L2 LINE L2 0 3313 2670 184 321 0 18 chr17 74959681 74959737 -14544816 - L2 LINE L2 -6 3307 3253 * 241 346 19 19 chr17 74960368 74960472 -14544081 - L2 LINE L2 -245 3027 2924 273 291 0 0 chr17 74960697 74960752 -14543801 + L2 LINE L2 3204 3258 -14 312 335 94 45 chr17 74962083 74962523 -14542030 + L2 LINE L2 2623 3078 -194 505 92 66 7 chr17 74962993 74963145 -14541408 + (TA)n Simple_repeat Simple_repeat 2 162 0 14677 186 59 9 chr17 74963148 74967981 -14536572 - L1PB1 LINE L1 -15 6852 2263 216 0 0 0 chr17 74967981 74968005 -14536548 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 10442 19 1 0 chr17 74968005 74969987 -14534566 - L1PA3 LINE L1 -10 6145 4164 14677 186 59 9 chr17 74969987 74971101 -14533452 - L1PB1 LINE L1 -4603 2264 596 1541 86 36 0 chr17 74971470 74971690 -14532863 - L1MA2 LINE L1 -387 5918 5691 2280 94 24 40 chr17 74971690 74972058 -14532495 + L1MA2 LINE L1 5928 6294 -10 338 0 24 0 chr17 74972061 74972103 -14532450 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 324 273 0 9 chr17 74972166 74972276 -14532277 - L2 LINE L2 -1358 1956 1848 181 189 0 0 chr17 74973895 74973932 -14530621 - MIR SINE MIR -1 261 225 287 357 41 0 chr17 74974195 74974293 -14530260 - MIR3 SINE MIR -19 189 88 655 226 31 0 chr17 74974812 74974971 -14529582 - MER3 DNA MER1_type -42 167 4 209 311 33 0 chr17 74975037 74975098 -14529455 - L2 LINE L2 -223 3049 2987 210 401 26 35 chr17 74975200 74975427 -14529126 - L2 LINE L2 -436 2878 2654 1643 138 8 93 chr17 74975436 74975790 -14528763 + L1MA4A LINE L1 5652 5975 -328 2466 122 8 8 chr17 74976186 74976554 -14527999 - THE1C LTR MaLR -7 368 1 417 335 46 0 chr17 74976791 74976964 -14527589 - MIR SINE MIR -71 191 11 21 0 0 0 chr17 74977227 74977248 -14527305 + AT_rich Low_complexity Low_complexity 1 21 0 529 271 36 12 chr17 74977438 74977604 -14526949 - L1ME LINE L1 -456 5665 5496 292 175 0 53 chr17 74977694 74977751 -14526802 + MLT1D LTR MaLR 18 71 -555 4512 85 9 0 chr17 74977759 74978406 -14526147 - L1P LINE L1 -743 5403 4751 3850 60 2 0 chr17 74978406 74978917 -14525636 + L1PA7 LINE L1 5654 6167 0 1806 188 59 17 chr17 74978918 74979228 -14525325 + MLT1D LTR MaLR 60 393 -112 2266 141 11 8 chr17 74979228 74979589 -14524964 - THE1B LTR MaLR -2 362 1 1806 188 59 17 chr17 74979589 74979687 -14524866 + MLT1D LTR MaLR 393 485 -20 301 280 93 20 chr17 74979721 74979871 -14524682 - L1ME LINE L1 -812 5334 5174 432 347 12 6 chr17 74979961 74980134 -14524419 + MIR SINE MIR 86 259 -3 2664 158 20 2 chr17 74980192 74980680 -14523873 - L1MA4 LINE L1 -5 6295 5799 2773 237 156 17 chr17 74982833 74982899 -14521654 + Zaphod DNA AcHobo 1 56 -3975 423 0 0 0 chr17 74982899 74982946 -14521607 + (CA)n Simple_repeat Simple_repeat 2 48 0 2773 237 156 17 chr17 74982946 74983745 -14520808 + Zaphod DNA AcHobo 56 986 -3045 421 230 18 9 chr17 74983752 74983865 -14520688 + Zaphod DNA AcHobo 3802 3915 -116 234 355 27 0 chr17 74983925 74984035 -14520518 - L3b LINE CR1 -149 1434 1322 417 328 20 36 chr17 74985960 74986155 -14518398 - MIR SINE MIR -45 217 26 568 190 133 6 chr17 74987881 74988106 -14516447 - MER63 DNA MER1_type -86 975 680 222 396 56 0 chr17 74988254 74988398 -14516155 - MIR3 SINE MIR -3 205 54 565 267 77 20 chr17 74992519 74992714 -14511839 - MLT1H1 LTR MaLR 0 590 385 248 174 22 0 chr17 74992868 74992914 -14511639 + CT-rich Low_complexity Low_complexity 4 50 0 618 131 5 63 chr17 74992921 74993112 -14511441 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 309 231 9 19 chr17 74993115 74993223 -14511330 + C-rich Low_complexity Low_complexity 4 110 0 576 138 40 29 chr17 74993240 74993414 -14511139 + C-rich Low_complexity Low_complexity 1 176 0 325 155 35 43 chr17 74993432 74993548 -14511005 + C-rich Low_complexity Low_complexity 5 119 0 896 173 115 74 chr17 74993561 74993887 -14510666 - MLT1H1 LTR MaLR -295 295 3 1741 199 0 0 chr17 74993954 74994246 -14510307 - AluJb SINE Alu -20 292 1 22 0 0 0 chr17 74994248 74994270 -14510283 + AT_rich Low_complexity Low_complexity 1 22 0 9873 143 22 1 chr17 74995112 74996668 -14507885 + Tigger1 DNA MER2_type 1 1588 -830 6254 191 14 10 chr17 74996677 74998323 -14506230 - L1PA16 LINE L1 -3251 3598 1949 9696 198 31 12 chr17 74998324 74998916 -14505637 + L1PA16 LINE L1 3618 4197 -2672 216 0 0 0 chr17 74998916 74998940 -14505613 + (CAA)n Simple_repeat Simple_repeat 2 25 0 9696 198 31 12 chr17 74998940 75001529 -14503024 + L1PA16 LINE L1 4197 6860 -9 4909 136 42 7 chr17 75001540 75002354 -14502199 + Tigger1 DNA MER2_type 1577 2418 0 533 300 46 46 chr17 75002483 75002766 -14501787 - MLT1K LTR MaLR -305 283 1 415 341 53 10 chr17 75004079 75004287 -14500266 - MIR SINE MIR -26 236 20 2425 90 0 6 chr17 75004866 75005205 -14499348 - AluSg SINE Alu 0 337 1 871 206 22 9 chr17 75005248 75005471 -14499082 - L1MD3 LINE L1 -14 7981 7756 1419 170 22 30 chr17 75005478 75005748 -14498805 + AluJo SINE Alu 36 303 -9 2149 99 0 14 chr17 75005756 75006072 -14498481 + AluSg SINE Alu 1 312 0 405 284 84 26 chr17 75006100 75006290 -14498263 + L2 LINE L2 3113 3313 0 2168 234 48 28 chr17 75007447 75007990 -14496563 - MLT2B3 LTR ERVL 0 554 1 188 247 56 56 chr17 75008480 75008569 -14495984 + L2 LINE L2 2503 2591 -723 251 319 22 22 chr17 75008570 75008661 -14495892 - MER5A DNA MER1_type -2 187 97 394 180 0 11 chr17 75008722 75008811 -14495742 - L1MA7 LINE L1 -6 6285 6198 307 318 100 18 chr17 75008864 75008974 -14495579 + L2 LINE L2 2587 2705 -609 4609 153 45 16 chr17 75008983 75009912 -14494641 - L1 LINE L1 -1518 4628 3670 234 0 0 0 chr17 75009912 75009938 -14494615 + (TG)n Simple_repeat Simple_repeat 2 27 0 3287 166 33 14 chr17 75009955 75011110 -14493443 + L1MA6 LINE L1 4639 5809 -491 267 173 0 0 chr17 75011147 75011199 -14493354 - Alu SINE Alu -9 293 242 774 137 0 8 chr17 75011201 75011325 -14493228 - AluJb SINE Alu -189 123 1 2773 144 19 2 chr17 75011335 75011815 -14492738 + L1MA6 LINE L1 5808 6295 -5 1752 180 14 3 chr17 75011827 75012122 -14492431 + AluSx SINE Alu 1 298 -14 676 320 148 34 chr17 75012140 75012518 -14492035 + L2 LINE L2 2711 3156 -157 2314 96 3 0 chr17 75012518 75012811 -14491742 + AluSp SINE Alu 1 294 -19 676 320 148 34 chr17 75012811 75012973 -14491580 + L2 LINE L2 3156 3298 -15 2422 102 28 19 chr17 75013196 75013557 -14490996 + THE1B LTR MaLR 1 364 0 1201 188 18 29 chr17 75013755 75014083 -14490470 - MLT1B LTR MaLR 0 390 4 2018 241 41 61 chr17 75014585 75015343 -14489210 + Charlie1a DNA MER1_type 1 743 -712 267 226 0 49 chr17 75015344 75015446 -14489107 + (TTA)n Simple_repeat Simple_repeat 2 98 0 335 167 45 0 chr17 75015450 75015516 -14489037 - Charlie1 DNA MER1_type -710 2051 1983 2701 181 52 18 chr17 75015516 75016175 -14488378 + Charlie1 DNA MER1_type 2047 2727 -34 302 332 59 90 chr17 75016390 75016679 -14487874 - L2 LINE L2 -2 3270 2991 824 278 98 33 chr17 75016684 75017051 -14487502 - MLT1G1 LTR MaLR -200 395 5 264 201 0 180 chr17 75017250 75017389 -14487164 - MLT1G1-int LTR MaLR -184 1187 1074 2135 119 0 13 chr17 75017519 75017831 -14486722 - AluSq SINE Alu -5 308 1 2245 91 7 0 chr17 75019542 75019829 -14484724 + AluSp SINE Alu 6 294 -19 2149 116 17 0 chr17 75020094 75020396 -14484157 + AluSx SINE Alu 1 307 -5 454 198 103 9 chr17 75020620 75020736 -14483817 + MIR SINE MIR 87 213 -49 2676 156 2 7 chr17 75020796 75021226 -14483327 + MSTA LTR MaLR 1 428 0 247 287 0 19 chr17 75021422 75021530 -14483023 + L1MC/D LINE L1 5343 5448 -2360 538 260 178 6 chr17 75021985 75022154 -14482399 - MER58A DNA MER1_type -26 198 1 1726 180 72 14 chr17 75022888 75023233 -14481320 + MLT1A1 LTR MaLR 1 365 0 180 0 0 0 chr17 75023487 75023507 -14481046 + (T)n Simple_repeat Simple_repeat 1 20 0 180 111 0 0 chr17 75023645 75023672 -14480881 + (A)n Simple_repeat Simple_repeat 1 27 0 27 29 0 0 chr17 75024023 75024057 -14480496 + AT_rich Low_complexity Low_complexity 1 34 0 285 254 113 78 chr17 75024250 75024727 -14479826 - L1ME4a LINE L1 0 6121 5628 2104 319 159 30 chr17 75024745 75026102 -14478451 - L2 LINE L2 -1 3312 1573 2003 147 3 7 chr17 75026102 75026401 -14478152 - AluSg SINE Alu -12 298 1 2104 319 159 30 chr17 75026401 75027077 -14477476 - L2 LINE L2 -1740 1573 986 527 155 29 10 chr17 75027077 75027180 -14477373 + MLT1B LTR MaLR 1 105 -285 726 78 0 19 chr17 75027182 75027285 -14477268 + AluSp/q SINE Alu 206 306 -7 1246 195 7 28 chr17 75027293 75027580 -14476973 + MLT1B LTR MaLR 110 390 0 1075 347 35 46 chr17 75027602 75028433 -14476120 - L2 LINE L2 -2342 972 151 6165 171 14 158 chr17 75028440 75030492 -14474061 + MER52A LTR ERV1 1 1755 0 239 217 29 0 chr17 75030845 75030914 -14473639 + L1M1 LINE L1 5497 5567 -733 2108 160 26 0 chr17 75031935 75032316 -14472237 + LTR45B LTR ERV1 1 391 -98 232 215 15 31 chr17 75032484 75032549 -14472004 + MLT1H1 LTR MaLR 427 490 -65 834 218 0 12 chr17 75034021 75034186 -14470367 + AluJb SINE Alu 140 302 -10 459 264 92 68 chr17 75034451 75034701 -14469852 - MIR SINE MIR -3 259 4 395 307 61 9 chr17 75034701 75034815 -14469738 + MER119 DNA MER1_type 1 120 -463 373 286 59 0 chr17 75034831 75034950 -14469603 + MER119 DNA MER1_type 458 583 0 234 0 0 0 chr17 75035051 75035077 -14469476 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2861 7 0 0 chr17 75035825 75036135 -14468418 - AluYa5 SINE Alu -1 310 1 1467 239 13 24 chr17 75036393 75036765 -14467788 + MLT1A2 LTR MaLR 2 369 -5 180 0 0 0 chr17 75037340 75037360 -14467193 + (T)n Simple_repeat Simple_repeat 1 20 0 372 312 22 22 chr17 75037883 75038021 -14466532 - MER5B DNA MER1_type -40 138 1 1639 221 60 31 chr17 75038120 75038600 -14465953 + MLT2B1 LTR ERVL 1 494 -26 45 34 0 0 chr17 75038629 75038688 -14465865 + AT_rich Low_complexity Low_complexity 1 59 0 282 404 29 18 chr17 75039293 75039464 -14465089 - L2 LINE L2 -181 3091 2919 3284 140 4 10 chr17 75039890 75040405 -14464148 + MER41E LTR ERV1 1 512 0 269 310 43 35 chr17 75040523 75040597 -14463956 + L2 LINE L2 3194 3271 -42 853 225 82 40 chr17 75040597 75040926 -14463627 - MER2 DNA MER2_type 0 344 2 269 310 43 35 chr17 75040926 75040967 -14463586 + L2 LINE L2 3271 3310 -3 217 245 19 0 chr17 75041137 75041190 -14463363 + GA-rich Low_complexity Low_complexity 1 54 0 3510 171 70 40 chr17 75042255 75042661 -14461892 - L1MB1 LINE L1 -1 6167 5775 2409 74 0 16 chr17 75042661 75042972 -14461581 + AluY SINE Alu 1 306 -5 3510 171 70 40 chr17 75042972 75043531 -14461022 - L1MB1 LINE L1 -393 5775 5171 219 114 0 0 chr17 75044001 75044036 -14460517 + (CA)n Simple_repeat Simple_repeat 2 36 0 1917 151 7 3 chr17 75044484 75044782 -14459771 - AluJo SINE Alu -13 299 1 3581 31 5 0 chr17 75045222 75045643 -14458910 + L1PA3 LINE L1 5725 6147 -8 369 286 112 46 chr17 75048097 75048293 -14456260 - MIR SINE MIR 0 262 54 8296 183 21 69 chr17 75048588 75050432 -14454121 + MER52A LTR ERV1 1 1755 0 2200 109 0 0 chr17 75050812 75051124 -14453429 - AluSq SINE Alu 0 312 1 488 347 139 25 chr17 75051357 75051830 -14452723 + L2 LINE L2 2451 2977 -337 721 306 28 25 chr17 75051963 75052286 -14452267 + LTR16A LTR ERVL 20 343 -107 871 304 65 52 chr17 75052405 75053236 -14451317 + HERV16 LTR ERVL 172 1075 -3921 1943 138 3 36 chr17 75053236 75053541 -14451012 + AluSx SINE Alu 14 308 -4 871 304 65 52 chr17 75053541 75053679 -14450874 + HERV16 LTR ERVL 1075 1210 -3786 664 258 124 17 chr17 75053708 75053941 -14450612 + MLT1E LTR MaLR 336 593 0 1216 251 53 53 chr17 75053941 75054416 -14450137 + L1MD2 LINE L1 5646 6120 -239 1687 323 48 32 chr17 75054456 75055025 -14449528 + HERV16 LTR ERVL 2256 2841 -2155 2416 116 51 19 chr17 75055025 75055456 -14449097 - MER65A LTR ERV1 0 445 1 1687 323 48 32 chr17 75055456 75055611 -14448942 + HERV16 LTR ERVL 2841 2992 -2004 623 311 35 19 chr17 75056738 75056995 -14447558 - MIR SINE MIR 0 262 2 2581 233 68 40 chr17 75057192 75058232 -14446321 - L1ME2 LINE L1 -45 6119 5046 322 328 62 39 chr17 75058283 75058542 -14446011 - L1MEc LINE L1 -5747 649 385 740 141 7 0 chr17 75058617 75058752 -14445801 + CT-rich Low_complexity Low_complexity 1 136 0 547 309 16 11 chr17 75058839 75059030 -14445523 - L1MEc LINE L1 -6168 228 37 258 32 0 0 chr17 75059161 75059192 -14445361 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 270 0 0 0 chr17 75059191 75059221 -14445332 + (GA)n Simple_repeat Simple_repeat 2 31 0 * 279 0 0 0 chr17 75059220 75059251 -14445302 + (TG)n Simple_repeat Simple_repeat 1 31 0 1767 144 25 7 chr17 75059264 75059541 -14445012 - AluJb SINE Alu -30 282 1 623 290 43 0 chr17 75059761 75059968 -14444585 - MIR SINE MIR -40 222 7 834 275 29 21 chr17 75062632 75062872 -14441681 - MIR SINE MIR -15 247 6 263 87 43 0 chr17 75063823 75063869 -14440684 + CT-rich Low_complexity Low_complexity 1 48 0 21 36 0 0 chr17 75064210 75064238 -14440315 + AT_rich Low_complexity Low_complexity 1 28 0 815 361 64 32 chr17 75064238 75064866 -14439687 + L3 LINE CR1 908 1555 -22 2218 127 0 0 chr17 75064878 75065177 -14439376 - AluSx SINE Alu -13 299 1 2980 93 11 78 chr17 75065327 75065856 -14438697 + L1MA8 LINE L1 4483 4976 -1170 3627 139 39 6 chr17 75065856 75066495 -14438058 + L1MA8 LINE L1 5628 6287 -4 22 35 0 0 chr17 75066629 75066658 -14437895 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr17 75067552 75067573 -14436980 + AT_rich Low_complexity Low_complexity 1 21 0 2129 73 0 11 chr17 75067584 75067859 -14436694 + AluY SINE Alu 39 310 -1 314 316 7 11 chr17 75068056 75068186 -14436367 - MER5A DNA MER1_type 0 189 9 232 373 29 0 chr17 75068769 75068871 -14435682 + MIR3 SINE MIR 97 201 -7 286 244 51 39 chr17 75069264 75069342 -14435211 - L2 LINE L2 0 3272 3194 * 803 338 98 15 chr17 75069333 75069803 -14434750 - L2 LINE L2 -1193 2121 1613 471 303 142 0 chr17 75069822 75069984 -14434569 - MER5A DNA MER1_type -1 188 4 217 404 14 27 chr17 75069986 75070132 -14434421 - L2 LINE L2 -2037 1277 1134 262 335 126 35 chr17 75070133 75070387 -14434166 - L2 LINE L2 -2286 1028 752 421 224 28 56 chr17 75070556 75070602 -14433951 - L2 LINE L2 -5 3308 3262 1549 186 85 63 chr17 75070602 75071049 -14433504 - MSTB2 LTR MaLR 0 457 1 421 224 28 56 chr17 75071049 75071109 -14433444 - L2 LINE L2 -51 3262 3205 2311 96 0 3 chr17 75071162 75071463 -14433090 + AluSg SINE Alu 1 300 -10 278 71 0 0 chr17 75073089 75073131 -14431422 + MADE1 DNA Mariner 39 80 0 727 278 135 41 chr17 75073701 75074169 -14430384 + MLT1H LTR MaLR 22 533 -16 317 148 66 0 chr17 75074337 75074398 -14430155 + L1MA6 LINE L1 6236 6300 0 422 269 23 31 chr17 75074574 75074704 -14429849 - MIR SINE MIR -12 250 122 39 22 0 0 chr17 75074792 75074838 -14429715 + AT_rich Low_complexity Low_complexity 1 46 0 508 208 23 31 chr17 75074862 75074992 -14429561 - MIR SINE MIR -55 207 79 3477 100 0 2 chr17 75075220 75075708 -14428845 + L1PB1 LINE L1 5662 6148 -3 1021 211 30 4 chr17 75075738 75075975 -14428578 - L1MB5 LINE L1 -23 6151 5909 180 0 0 0 chr17 75076912 75076932 -14427621 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 454 223 58 10 chr17 75077231 75077334 -14427219 + MIR SINE MIR 20 127 -135 4195 161 22 45 chr17 75077687 75078530 -14426023 - L1MB3 LINE L1 -3 6180 5357 298 291 34 43 chr17 75079040 75079157 -14425396 + L3b LINE CR1 1329 1444 -139 1027 291 179 17 chr17 75079278 75080105 -14424448 - Charlie7 DNA MER1_type -927 1685 725 279 0 0 0 chr17 75080119 75080150 -14424403 + (TG)n Simple_repeat Simple_repeat 2 32 0 406 275 0 0 chr17 75080164 75080244 -14424309 + Tigger3(Golem) DNA MER2_type 2 81 -2948 399 77 0 77 chr17 75080243 75080270 -14424283 + Tigger3(Golem) DNA MER2_type 2721 2748 -280 * 2360 93 0 3 chr17 75080270 75080581 -14423972 - AluSg SINE Alu 0 310 1 399 77 0 77 chr17 75080581 75080631 -14423922 + Tigger3(Golem) DNA MER2_type 2748 2792 -236 1319 193 4 4 chr17 75080696 75080939 -14423614 + Tigger3(Golem) DNA MER2_type 2796 3038 0 192 77 0 0 chr17 75080953 75080979 -14423574 + (CATA)n Simple_repeat Simple_repeat 3 28 0 364 204 162 7 chr17 75080987 75081129 -14423424 - Charlie7 DNA MER1_type -1921 691 528 518 255 47 57 chr17 75081190 75081382 -14423171 - MIR SINE MIR -70 192 3 1184 258 58 46 chr17 75081382 75081863 -14422690 - Charlie7 DNA MER1_type -2125 487 1 194 119 48 0 chr17 75082982 75083024 -14421529 + T-rich Low_complexity Low_complexity 2 45 0 2344 95 0 19 chr17 75083395 75083712 -14420841 + AluY SINE Alu 1 311 0 186 43 0 0 chr17 75083830 75083853 -14420700 + (TAA)n Simple_repeat Simple_repeat 1 23 0 582 294 88 15 chr17 75083880 75084084 -14420469 - MIR SINE MIR -42 220 2 839 242 47 9 chr17 75084283 75084498 -14420055 - MIR SINE MIR 0 262 40 185 94 31 0 chr17 75084773 75084805 -14419748 + T-rich Low_complexity Low_complexity 3 35 0 572 280 33 9 chr17 75085177 75085391 -14419162 - L1M4 LINE L1 -1195 4951 4733 919 269 71 80 chr17 75085394 75086311 -14418242 - L1M4 LINE L1 -1980 4166 3258 273 75 0 0 chr17 75086350 75086390 -14418163 + (TG)n Simple_repeat Simple_repeat 2 41 0 273 135 0 0 chr17 75086391 75086443 -14418110 + (GA)n Simple_repeat Simple_repeat 2 53 0 387 287 72 56 chr17 75086454 75087096 -14417457 - L1ME LINE L1 -5015 1246 544 1760 170 0 3 chr17 75087122 75087437 -14417116 - AluJb SINE Alu 0 314 1 297 207 69 17 chr17 75088348 75088464 -14416089 - MER69 DNA AcHobo -395 2131 2010 1111 291 91 19 chr17 75088508 75088924 -14415629 - MER69 DNA AcHobo -776 450 5 557 261 0 0 chr17 75089157 75089272 -14415281 + MIR SINE MIR 32 146 -116 210 246 0 0 chr17 75089274 75089335 -14415218 + (TATG)n Simple_repeat Simple_repeat 2 62 0 2035 170 33 40 chr17 75089347 75089403 -14415150 - MLT2A2 LTR ERVL 0 554 499 4493 104 52 60 chr17 75089403 75089795 -14414758 + MER4E LTR ERV1 4 389 -390 2391 67 0 7 chr17 75089795 75090093 -14414460 + AluY SINE Alu 3 298 -13 4493 104 52 60 chr17 75090093 75090482 -14414071 + MER4E LTR ERV1 389 779 0 2035 170 33 40 chr17 75090482 75090988 -14413565 - MLT2A2 LTR ERVL -55 499 3 340 193 42 8 chr17 75090997 75091116 -14413437 + (TA)n Simple_repeat Simple_repeat 1 123 0 22 0 0 0 chr17 75091152 75091174 -14413379 + AT_rich Low_complexity Low_complexity 1 22 0 2048 128 3 19 chr17 75091503 75091815 -14412738 + AluSx SINE Alu 1 307 -5 185 397 0 0 chr17 75092547 75092615 -14411938 + L2 LINE L2 3127 3194 -78 2251 104 3 0 chr17 75092949 75093246 -14411307 - AluSq SINE Alu -15 298 1 276 351 135 14 chr17 75093251 75093770 -14410783 - L2 LINE L2 -1519 1795 1214 485 98 195 0 chr17 75093934 75094016 -14410537 + MER4A LTR ERV1 1 98 -566 1955 135 9 10 chr17 75094018 75094363 -14410190 + MER4A LTR ERV1 263 664 0 296 267 0 44 chr17 75095049 75095139 -14409414 - L2 LINE L2 -48 3265 3180 2001 148 3 3 chr17 75095391 75095702 -14408851 + AluJo SINE Alu 1 311 -1 2553 161 22 0 chr17 75095784 75096201 -14408352 - MSTB LTR MaLR 0 426 1 2290 91 0 0 chr17 75096232 75096528 -14408025 + AluSg SINE Alu 1 296 -14 2689 70 22 0 chr17 75096866 75097224 -14407329 + L1PA8 LINE L1 5805 6170 -2 276 100 0 0 chr17 75098198 75098238 -14406315 + (T)n Simple_repeat Simple_repeat 1 40 0 236 309 29 0 chr17 75099708 75099776 -14404777 + L2 LINE L2 3195 3264 -8 276 368 72 0 chr17 75099788 75099913 -14404640 - L2 LINE L2 -4 3309 3176 4119 72 13 6 chr17 75099947 75100485 -14404068 - MER41A LTR ERV1 -12 542 1 2532 254 42 23 chr17 75101489 75102228 -14402325 + L1MB7 LINE L1 1 753 -5789 7705 216 53 19 chr17 75102264 75104762 -14399791 + L1MB7 LINE L1 2820 5519 -1163 2109 116 41 36 chr17 75104762 75105124 -14399429 - THE1B LTR MaLR 0 364 1 7705 216 53 19 chr17 75105124 75106309 -14398244 + L1MB7 LINE L1 5519 6662 -20 418 367 98 22 chr17 75107793 75107962 -14396591 - L2 LINE L2 -470 2844 2689 404 318 0 15 chr17 75107962 75108094 -14396459 + MER94 DNA DNA 5 134 0 418 367 98 22 chr17 75108094 75108415 -14396138 - L2 LINE L2 -625 2689 2317 26 0 0 0 chr17 75110266 75110292 -14394261 + AT_rich Low_complexity Low_complexity 1 26 0 2069 132 4 0 chr17 75110374 75110709 -14393844 + AluSx SINE Alu 1 336 0 2507 70 0 0 chr17 75111501 75111803 -14392750 - AluY SINE Alu -9 302 1 321 239 152 0 chr17 75113723 75113815 -14390738 + L2 LINE L2 3160 3265 -7 368 260 216 28 chr17 75113966 75114147 -14390406 - MIR SINE MIR 0 262 48 317 317 0 0 chr17 75114631 75114735 -14389818 + (CA)n Simple_repeat Simple_repeat 1 104 0 1667 174 6 41 chr17 75115298 75115615 -14388938 + AluSx SINE Alu 1 306 -6 2280 100 0 7 chr17 75116333 75116633 -14387920 + AluSg SINE Alu 1 298 -12 32 67 0 0 chr17 75117158 75117218 -14387335 + AT_rich Low_complexity Low_complexity 1 60 0 944 244 55 0 chr17 75118753 75119007 -14385546 - MLT1F LTR MaLR 0 542 275 552 270 119 58 chr17 75118974 75119285 -14385268 - MLT1E LTR MaLR -263 330 1 * 417 205 185 46 chr17 75119338 75119489 -14385064 + MER5A DNA MER1_type 17 188 -1 2541 59 0 7 chr17 75120271 75120576 -14383977 - AluSq SINE Alu -10 303 1 1114 297 89 17 chr17 75122835 75123475 -14381078 - L2 LINE L2 -1 3312 2628 2178 132 0 0 chr17 75123865 75124168 -14380385 + AluSx SINE Alu 5 307 -5 1117 226 73 93 chr17 75124600 75124801 -14379752 - MLT1E1 LTR MaLR 0 654 450 2315 98 0 7 chr17 75124801 75125108 -14379445 - AluSc SINE Alu -4 305 1 1117 226 73 93 chr17 75125108 75125534 -14379019 - MLT1E1 LTR MaLR -204 450 1 2306 113 0 3 chr17 75125588 75125899 -14378654 - AluSg SINE Alu 0 310 1 335 267 124 4 chr17 75126196 75126316 -14378237 - MIR3 SINE MIR -21 187 56 796 228 85 11 chr17 75126674 75126863 -14377690 + MIR SINE MIR 28 230 -32 188 33 0 33 chr17 75126875 75126905 -14377648 + (TTA)n Simple_repeat Simple_repeat 1 29 0 502 237 70 44 chr17 75126966 75127194 -14377359 + MER106A DNA MER1_type 3 236 0 2157 130 10 0 chr17 75127217 75127524 -14377029 + AluSx SINE Alu 1 310 -2 398 262 8 33 chr17 75127545 75127667 -14376886 - MER45 DNA AcHobo -59 119 1 2069 119 7 7 chr17 75127987 75128307 -14376246 - AluSp SINE Alu 0 313 1 1486 196 51 17 chr17 75129170 75129327 -14375226 - MLT1A1 LTR MaLR 0 365 215 1895 141 63 30 chr17 75129327 75129690 -14374863 + THE1C LTR MaLR 1 375 0 1486 196 51 17 chr17 75129690 75129885 -14374668 - MLT1A1 LTR MaLR -150 215 1 640 262 38 22 chr17 75129930 75130113 -14374440 + MER58A DNA MER1_type 39 224 0 433 284 184 11 chr17 75130119 75130309 -14374244 - MIR SINE MIR 0 262 40 277 309 69 22 chr17 75130719 75130865 -14373688 + MIR3 SINE MIR 10 168 -63 604 308 5 5 chr17 75130901 75131096 -14373457 + L2 LINE L2 2394 2588 -726 467 191 77 60 chr17 75131445 75131603 -14372950 + LTR45 LTR ERV1 324 525 0 881 269 135 32 chr17 75131603 75132248 -14372305 + L2 LINE L2 2572 3291 -22 2252 98 9 28 chr17 75132361 75132679 -14371874 + AluSx SINE Alu 1 312 0 738 182 35 86 chr17 75132785 75132864 -14371689 + MER5A DNA MER1_type 1 82 -107 2513 63 0 3 chr17 75132864 75133167 -14371386 + AluY SINE Alu 2 303 -8 738 182 35 86 chr17 75133167 75133285 -14371268 + MER5A DNA MER1_type 82 188 -1 272 329 93 25 chr17 75133335 75133496 -14371057 + MIR3 SINE MIR 3 174 -34 599 286 27 22 chr17 75133977 75134162 -14370391 - MIR SINE MIR -16 246 61 418 105 21 32 chr17 75135967 75136062 -14368491 + (GAAA)n Simple_repeat Simple_repeat 1 94 0 285 151 0 0 chr17 75136796 75136849 -14367704 + (TG)n Simple_repeat Simple_repeat 1 53 0 309 161 0 115 chr17 75138026 75138113 -14366440 + MLT1L LTR MaLR 2 78 -537 2649 96 6 3 chr17 75138239 75138602 -14365951 - THE1B LTR MaLR 0 364 1 595 332 11 16 chr17 75138742 75138929 -14365624 + MIR SINE MIR 41 226 -36 309 180 8 82 chr17 75139552 75139635 -14364918 + L1ME4a LINE L1 5960 6034 -87 2279 81 3 0 chr17 75139635 75139950 -14364603 - AluY SINE Alu 0 316 1 309 180 8 82 chr17 75139950 75139987 -14364566 + L1ME4a LINE L1 6034 6072 -49 2062 127 0 31 chr17 75140022 75140344 -14364209 - AluSx SINE Alu 0 312 1 180 133 0 0 chr17 75141594 75141624 -14362929 + MIR SINE MIR 137 166 -96 1585 161 13 33 chr17 75141972 75142276 -14362277 + AluSx SINE Alu 1 298 -14 697 151 13 66 chr17 75143112 75143217 -14361336 + L1MA4 LINE L1 6150 6246 -54 781 178 0 15 chr17 75143217 75143352 -14361201 + FLAM_C SINE Alu 1 133 0 697 151 13 66 chr17 75143352 75143398 -14361155 + L1MA4 LINE L1 6246 6293 -7 356 319 42 8 chr17 75144121 75144240 -14360313 + MIR SINE MIR 23 145 -117 24 0 0 0 chr17 75145423 75145447 -14359106 + AT_rich Low_complexity Low_complexity 1 24 0 2206 124 0 25 chr17 75146065 75146379 -14358174 - AluSx SINE Alu -6 306 1 221 159 0 23 chr17 75146632 75146676 -14357877 + (CTTA)n Simple_repeat Simple_repeat 1 43 0 522 289 79 66 chr17 75146680 75147151 -14357402 - L1MCc LINE L1 -4482 2640 2164 5485 90 9 4 chr17 75147151 75147951 -14356602 + L1PA13 LINE L1 5360 6163 0 347 277 110 47 chr17 75147982 75148586 -14355967 - L1MCc LINE L1 -4888 1535 1275 333 168 59 20 chr17 75149661 75149681 -14354872 - L1MA10 LINE L1 -53 6281 6262 1998 229 40 61 chr17 75149681 75150323 -14354230 - L1ME1 LINE L1 -63 6103 5478 1919 148 6 19 chr17 75150323 75150634 -14353919 - AluSx SINE Alu -5 307 1 1998 229 40 61 chr17 75150634 75150761 -14353792 - L1ME1 LINE L1 -688 5478 5350 7811 28 1 0 chr17 75150767 75152470 -14352083 - L1PA3 LINE L1 -3 6152 4456 7703 29 1 0 chr17 75152470 75153424 -14351129 + L1PA3 LINE L1 3511 4465 -1681 724 240 57 31 chr17 75153422 75153739 -14350814 - L1ME1 LINE L1 -776 5370 5046 * 202 363 71 26 chr17 75154709 75154822 -14349731 - L2 LINE L2 0 3272 3155 189 132 0 0 chr17 75154903 75154941 -14349612 + (T)n Simple_repeat Simple_repeat 1 38 0 1003 33 0 0 chr17 75154943 75155064 -14349489 - L1PA4 LINE L1 -3 6152 6032 1080 215 90 81 chr17 75155538 75155916 -14348637 + MLT2D LTR ERVL 1 385 -29 387 0 0 0 chr17 75155916 75155959 -14348594 + (CA)n Simple_repeat Simple_repeat 2 44 0 1080 215 90 81 chr17 75155959 75155990 -14348563 + MLT2D LTR ERVL 385 414 0 702 272 46 5 chr17 75157485 75157680 -14346873 - MER58A DNA MER1_type 0 224 22 2456 69 0 3 chr17 75158083 75158386 -14346167 + AluY SINE Alu 1 302 -9 291 326 135 21 chr17 75158943 75159136 -14345417 - MIR SINE MIR -16 246 32 516 258 5 81 chr17 75159154 75159340 -14345213 - MER5B DNA MER1_type -6 172 1 1595 153 94 53 chr17 75160053 75160413 -14344140 + THE1C LTR MaLR 1 375 0 1769 161 38 30 chr17 75161211 75161608 -14342945 - L1MA10 LINE L1 -4 6330 5931 586 170 20 0 chr17 75161608 75161708 -14342845 + L1MA10 LINE L1 5821 5922 -267 1149 176 14 27 chr17 75161734 75161955 -14342598 - MER20 DNA MER1_type -1 218 1 1763 164 0 7 chr17 75162510 75162785 -14341768 - AluJo SINE Alu -39 273 1 282 324 78 0 chr17 75162817 75162919 -14341634 + MIR3 SINE MIR 92 201 -7 234 0 0 0 chr17 75163617 75163643 -14340910 + (A)n Simple_repeat Simple_repeat 1 26 0 1891 113 122 42 chr17 75163961 75164298 -14340255 + THE1B LTR MaLR 1 364 0 1149 183 4 39 chr17 75164856 75165085 -14339468 + AluJo SINE Alu 85 305 -7 348 347 40 27 chr17 75165162 75165262 -14339291 - L2 LINE L2 -188 3084 2980 1378 186 20 52 chr17 75165262 75165400 -14339153 + AluJo SINE Alu 1 142 -170 198 0 0 0 chr17 75165400 75165422 -14339131 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1378 186 20 52 chr17 75165422 75165589 -14338964 + AluJo SINE Alu 142 296 -16 348 347 40 27 chr17 75165589 75165638 -14338915 - L2 LINE L2 -292 2980 2933 239 415 0 8 chr17 75166608 75166726 -14337827 + L3 LINE CR1 1393 1509 -68 964 183 0 6 chr17 75167042 75167296 -14337257 - AluJb SINE Alu -10 302 1 2307 135 24 14 chr17 75167413 75167783 -14336770 + MSTA LTR MaLR 55 428 0 3894 182 35 11 chr17 75167783 75168591 -14335962 + MSTA-int LTR MaLR 1 858 -793 2147 105 3 20 chr17 75168595 75168900 -14335653 - AluSq SINE Alu -13 300 1 252 267 0 22 chr17 75169239 75169329 -14335224 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 231 36 0 0 chr17 75170008 75170036 -14334517 + (TTAAA)n Simple_repeat Simple_repeat 4 31 0 359 290 69 23 chr17 75170356 75170487 -14334066 - MIR SINE MIR -44 218 82 913 197 30 105 chr17 75170607 75170968 -14333585 + LTR37A LTR ERV1 93 426 0 911 246 137 14 chr17 75171277 75171773 -14332780 + L1ME3A LINE L1 4350 4906 -1240 410 263 266 15 chr17 75171825 75172084 -14332469 - MER110 LTR ERV1 -2 489 166 490 263 36 52 chr17 75172264 75172515 -14332038 + L1ME3A LINE L1 4959 5205 -941 1095 280 151 11 chr17 75172580 75173037 -14331516 + L1ME3A LINE L1 5591 6111 -59 217 266 25 0 chr17 75173064 75173143 -14331410 + GA-rich Low_complexity Low_complexity 3 83 0 2023 134 0 26 chr17 75174029 75174336 -14330217 - AluSx SINE Alu -13 299 1 621 115 0 0 chr17 75174749 75174845 -14329708 + (TCC)n Simple_repeat Simple_repeat 2 97 0 1274 136 200 20 chr17 75174845 75175095 -14329458 - AluSg1 SINE Alu -14 295 1 183 42 0 0 chr17 75175926 75175950 -14328603 + (T)n Simple_repeat Simple_repeat 1 24 0 829 180 6 6 chr17 75175965 75176143 -14328410 + GA-rich Low_complexity Low_complexity 3 180 0 253 0 31 0 chr17 75176143 75176175 -14328378 + (GAA)n Simple_repeat Simple_repeat 3 35 0 448 134 0 24 chr17 75176459 75176541 -14328012 + MADE1 DNA Mariner 1 80 0 25 31 0 0 chr17 75176709 75176741 -14327812 + AT_rich Low_complexity Low_complexity 1 32 0 182 278 46 119 chr17 75176770 75176921 -14327632 - MIR SINE MIR -56 206 67 225 65 0 0 chr17 75177103 75177134 -14327419 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 864 304 44 19 chr17 75179174 75179493 -14325060 - MLT1J2 LTR MaLR -21 429 103 2121 161 18 31 chr17 75179499 75179889 -14324664 + MLT1B LTR MaLR 6 390 0 621 178 9 0 chr17 75179889 75179994 -14324559 - MLT1J2 LTR MaLR -344 106 1 235 344 10 21 chr17 75179999 75180095 -14324458 - MIR3 SINE MIR -23 185 91 219 69 0 0 chr17 75180270 75180299 -14324254 + (GA)n Simple_repeat Simple_repeat 2 30 0 658 228 39 8 chr17 75180299 75180426 -14324127 - MER45A DNA AcHobo -47 131 1 2186 108 3 10 chr17 75180655 75180961 -14323592 - AluSc SINE Alu -5 304 1 35 0 0 0 chr17 75181594 75181629 -14322924 + AT_rich Low_complexity Low_complexity 1 35 0 211 93 47 0 chr17 75181754 75181797 -14322756 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 743 251 34 19 chr17 75181966 75182173 -14322380 + MIR SINE MIR 15 224 -38 279 325 40 20 chr17 75182187 75182338 -14322215 + MIR SINE MIR 106 259 -3 630 183 0 14 chr17 75182677 75182819 -14321734 - L1 LINE L1 -1471 4675 4536 * 1355 97 92 0 chr17 75182808 75183014 -14321539 + L1P5 LINE L1 5545 5769 -387 2096 162 39 35 chr17 75183016 75183564 -14320989 - MLT2A2 LTR ERVL 0 554 1 722 200 0 15 chr17 75183596 75183731 -14320822 + FLAM_C SINE Alu 1 133 0 1373 174 0 4 chr17 75183753 75183995 -14320558 + L1PB4 LINE L1 5909 6149 -7 2127 108 30 48 chr17 75183998 75184332 -14320221 + THE1B LTR MaLR 1 328 -36 1314 96 0 0 chr17 75184477 75184644 -14319909 + AluSg/x SINE Alu 133 299 -13 261 0 0 0 chr17 75184644 75184673 -14319880 + (TA)n Simple_repeat Simple_repeat 2 30 0 249 33 0 0 chr17 75184672 75184702 -14319851 + (CA)n Simple_repeat Simple_repeat 2 31 0 * 210 238 38 25 chr17 75184717 75184797 -14319756 + A-rich Low_complexity Low_complexity 1 81 0 22 35 0 0 chr17 75185520 75185549 -14319004 + AT_rich Low_complexity Low_complexity 1 29 0 191 286 126 89 chr17 75185776 75186045 -14318508 - L2 LINE L2 -4 3268 2990 770 240 10 10 chr17 75186328 75186528 -14318025 + L1MB7 LINE L1 5931 6130 -54 318 214 97 19 chr17 75187212 75187315 -14317238 - MIR SINE MIR -65 197 87 1287 289 47 2 chr17 75188180 75188589 -14315964 - LTR16A LTR ERVL -6 444 18 23 54 0 0 chr17 75190412 75190449 -14314104 + AT_rich Low_complexity Low_complexity 1 37 0 1978 91 7 59 chr17 75191226 75191533 -14313020 - AluSp SINE Alu -22 291 1 1925 193 33 51 chr17 75191890 75192402 -14312151 - MLT1D LTR MaLR 0 505 3 1030 299 107 10 chr17 75192407 75192791 -14311762 - MLT1J2 LTR MaLR -27 423 3 309 155 0 0 chr17 75192994 75193052 -14311501 + (CA)n Simple_repeat Simple_repeat 2 59 0 597 280 66 11 chr17 75194170 75194299 -14310254 - MLT1J2 LTR MaLR -258 192 49 288 0 0 0 chr17 75194299 75194331 -14310222 + (TG)n Simple_repeat Simple_repeat 1 32 0 597 280 66 11 chr17 75194331 75194383 -14310170 - MLT1J2 LTR MaLR -401 49 1 244 327 105 52 chr17 75194580 75194733 -14309820 - L2 LINE L2 0 3272 3112 2202 88 0 73 chr17 75194961 75195290 -14309263 + AluSq SINE Alu 1 305 -8 319 348 116 0 chr17 75198082 75198263 -14306290 + L1ME4a LINE L1 5725 5926 -195 253 246 261 0 chr17 75198314 75198456 -14306097 + MIR SINE MIR 58 236 -26 2290 113 30 24 chr17 75200630 75201003 -14303550 - THE1C LTR MaLR 0 375 1 642 318 177 7 chr17 75201271 75201570 -14302983 - MLT1I LTR MaLR 0 409 60 252 199 87 79 chr17 75201843 75202035 -14302518 - MLT1F1-int LTR MaLR -1157 214 17 2197 202 34 10 chr17 75202053 75202578 -14301975 - MLT1F1 LTR MaLR -5 562 7 199 313 146 0 chr17 75202697 75202793 -14301760 - L2 LINE L2 -35 3278 3169 1741 183 48 3 chr17 75202793 75203126 -14301427 + MER7A DNA MER2_type 1 346 0 551 328 17 6 chr17 75203204 75203384 -14301169 + MIR SINE MIR 13 194 -68 278 115 19 0 chr17 75203390 75203442 -14301111 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 23 0 0 0 chr17 75204700 75204723 -14299830 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr17 75206691 75206717 -14297836 + AT_rich Low_complexity Low_complexity 1 26 0 234 62 0 0 chr17 75207791 75207823 -14296730 + (A)n Simple_repeat Simple_repeat 1 32 0 1016 198 5 36 chr17 75208136 75208358 -14296195 - MER20 DNA MER1_type 0 219 5 660 320 50 61 chr17 75210303 75210743 -14293810 - L2 LINE L2 0 3313 2879 1373 181 55 106 chr17 75210770 75211174 -14293379 + MLT1B LTR MaLR 1 383 -7 250 326 76 7 chr17 75211245 75211389 -14293164 - L2 LINE L2 -1022 2292 2139 4925 253 30 26 chr17 75211391 75212041 -14292512 + L1M4 LINE L1 3522 4168 -1978 1776 158 49 74 chr17 75212041 75212446 -14292107 - MSTD LTR MaLR 0 396 2 4925 253 30 26 chr17 75212446 75213577 -14290976 + L1M4 LINE L1 4168 5309 -837 631 149 9 0 chr17 75213580 75213687 -14290866 + HY1 scRNA scRNA 1 108 -4 1397 143 0 4 chr17 75213735 75214070 -14290483 - L1M1 LINE L1 -743 5403 5131 * 5181 112 18 4 chr17 75214050 75214835 -14289718 + L1MA2 LINE L1 5447 6242 -62 5018 98 10 6 chr17 75214835 75215516 -14289037 + THE1B-int LTR MaLR 897 1580 0 2239 132 28 6 chr17 75215516 75215872 -14288681 + THE1B LTR MaLR 1 364 0 228 184 0 0 chr17 75215994 75216043 -14288510 + (TG)n Simple_repeat Simple_repeat 2 50 0 420 92 46 58 chr17 75216162 75216336 -14288217 + (TA)n Simple_repeat Simple_repeat 1 172 0 4168 183 93 35 chr17 75216337 75216975 -14287578 - LTR29-int LTR ERV1 -4662 1669 1069 216 0 0 0 chr17 75216975 75216999 -14287554 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 4168 183 93 35 chr17 75216999 75217895 -14286658 - LTR29-int LTR ERV1 -5262 1069 5 3433 142 56 26 chr17 75217901 75218456 -14286097 - LTR29 LTR ERV1 0 622 46 3617 160 55 13 chr17 75218456 75219142 -14285411 - LTR62 LTR ERVK -2 717 3 3433 142 56 26 chr17 75219142 75219190 -14285363 - LTR29 LTR ERV1 -576 46 1 291 239 43 43 chr17 75219224 75219316 -14285237 - LTR29 LTR ERV1 -526 96 5 411 334 65 15 chr17 75219535 75219757 -14284796 - MIR SINE MIR 0 262 35 285 305 51 40 chr17 75221243 75221420 -14283133 + MIR SINE MIR 2 180 -82 681 225 80 0 chr17 75221571 75221722 -14282831 - MLT1E LTR MaLR 0 654 492 2132 130 38 14 chr17 75221723 75222059 -14282494 + L1MA9 LINE L1 5811 6158 -154 261 0 0 0 chr17 75222059 75222088 -14282465 + (CA)n Simple_repeat Simple_repeat 1 29 0 2132 130 38 14 chr17 75222088 75222121 -14282432 + L1MA9 LINE L1 6158 6189 -123 1552 149 15 41 chr17 75222122 75222466 -14282087 + MSTA LTR MaLR 1 384 -42 1857 147 13 16 chr17 75222466 75222778 -14281775 - AluSx SINE Alu -1 311 1 1552 149 15 41 chr17 75222778 75222820 -14281733 + MSTA LTR MaLR 384 426 0 452 242 8 0 chr17 75222820 75222940 -14281613 + L1MA9 LINE L1 6192 6312 0 1006 306 34 21 chr17 75222966 75223293 -14281260 - MLT1E LTR MaLR -144 449 119 825 215 13 0 chr17 75223296 75223454 -14281099 - MLT1E LTR MaLR -433 160 1 864 275 112 58 chr17 75223696 75224180 -14280373 + LTR33 LTR ERVL 10 519 -2 305 273 65 11 chr17 75225557 75225663 -14278890 + MIR SINE MIR 28 140 -68 2064 121 0 0 chr17 75225875 75226200 -14278353 - AluSg SINE Alu 0 325 1 269 322 151 0 chr17 75226392 75226544 -14278009 - MIR SINE MIR 0 262 88 495 296 17 34 chr17 75226699 75226878 -14277675 + MER5A DNA MER1_type 1 176 -13 205 335 80 46 chr17 75227402 75227641 -14276912 - L2 LINE L2 -838 2476 2230 1971 117 25 0 chr17 75228232 75228506 -14276047 + AluSp SINE Alu 1 281 -32 275 0 29 0 chr17 75228506 75228541 -14276012 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 276 77 0 0 chr17 75228648 75228687 -14275866 + (TG)n Simple_repeat Simple_repeat 1 39 0 304 317 20 0 chr17 75228687 75228788 -14275765 - L1MC4 LINE L1 -1333 6709 6607 2149 222 140 14 chr17 75229783 75230427 -14274126 + L1ME1 LINE L1 5441 6165 -1 682 42 0 21 chr17 75230591 75230687 -14273866 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 824 196 7 13 chr17 75230691 75230844 -14273709 - AluJb SINE Alu -24 288 137 241 325 0 13 chr17 75231035 75231112 -14273441 - L2 LINE L2 0 3313 3238 1817 229 42 25 chr17 75231733 75232204 -14272349 - MLT1D LTR MaLR -3 502 24 354 169 0 0 chr17 75232205 75232270 -14272283 + (TA)n Simple_repeat Simple_repeat 2 66 0 300 91 0 0 chr17 75232271 75232315 -14272238 + (TG)n Simple_repeat Simple_repeat 2 45 0 2173 108 0 3 chr17 75232316 75232603 -14271950 - AluSq SINE Alu -27 286 1 499 291 86 21 chr17 75233731 75234011 -14270542 + MLT1J LTR MaLR 36 306 -144 192 274 78 0 chr17 75234362 75234413 -14270140 - L2 LINE L2 -4 3268 3214 185 385 45 39 chr17 75234539 75234695 -14269858 - L2 LINE L2 -176 3096 2940 187 371 87 17 chr17 75234927 75235215 -14269338 - L2 LINE L2 -743 2571 2264 1103 269 65 31 chr17 75235522 75235859 -14268694 - L1M4 LINE L1 -1103 5043 4682 270 0 0 0 chr17 75235859 75235889 -14268664 + (TA)n Simple_repeat Simple_repeat 2 31 0 1103 269 65 31 chr17 75235889 75236060 -14268493 - L1M4 LINE L1 -1464 4682 4518 1243 188 34 111 chr17 75236169 75236669 -14267884 - L1M4 LINE L1 -2904 3242 2792 1628 112 120 11 chr17 75236669 75236945 -14267608 + AluSq SINE Alu 5 310 -3 1243 188 34 111 chr17 75236945 75237029 -14267524 - L1M4 LINE L1 -3354 2792 2703 2134 175 67 5 chr17 75237047 75237436 -14267117 + MSTB LTR MaLR 1 413 -13 8037 192 34 4 chr17 75237445 75239003 -14265550 + MSTB-int LTR MaLR 1 1651 0 1936 163 56 56 chr17 75239035 75239447 -14265106 + MSTB LTR MaLR 15 426 0 443 250 8 8 chr17 75239507 75239639 -14264914 + L1M4 LINE L1 3332 3463 -2683 703 258 86 10 chr17 75239645 75239936 -14264617 - L1M4 LINE L1 -867 5279 4967 386 286 56 31 chr17 75239937 75240133 -14264420 - L1ME LINE L1 -5818 252 52 479 285 25 37 chr17 75240211 75240453 -14264100 - L1MEd LINE L1 -4908 1211 973 21 0 0 0 chr17 75240541 75240562 -14263991 + AT_rich Low_complexity Low_complexity 1 21 0 369 331 122 67 chr17 75240643 75241242 -14263311 - L1MEd LINE L1 -5366 753 122 26 50 0 0 chr17 75242780 75242820 -14261733 + AT_rich Low_complexity Low_complexity 1 40 0 249 356 17 34 chr17 75243010 75243128 -14261425 - L2 LINE L2 -250 3063 2948 2326 289 23 28 chr17 75243129 75243814 -14260739 - MER115 DNA AcHobo 0 693 12 242 349 109 23 chr17 75243944 75244119 -14260434 - L2 LINE L2 -343 2971 2782 457 345 48 14 chr17 75244434 75244643 -14259910 + MIR SINE MIR 41 256 -6 288 221 0 0 chr17 75245079 75245156 -14259397 + (CA)n Simple_repeat Simple_repeat 1 77 0 243 287 213 0 chr17 75245439 75245533 -14259020 + MIR SINE MIR 24 137 -125 344 58 0 19 chr17 75245559 75245611 -14258942 + (TTA)n Simple_repeat Simple_repeat 1 51 0 341 378 42 33 chr17 75245706 75246037 -14258516 - LTR16C LTR ERVL -2 489 156 2291 105 0 0 chr17 75246374 75246678 -14257875 + AluSx SINE Alu 1 304 -8 633 219 76 57 chr17 75246720 75246930 -14257623 - MER20 DNA MER1_type -4 215 2 637 121 0 0 chr17 75247424 75247545 -14257008 - AluSg/x SINE Alu 0 310 190 1333 89 0 84 chr17 75247545 75247748 -14256805 + AluSq SINE Alu 3 188 -125 1382 201 0 38 chr17 75247755 75248073 -14256480 - L1MC3 LINE L1 -1 7784 7479 1848 112 0 8 chr17 75248618 75248868 -14255685 + AluSg SINE Alu 39 286 -24 478 332 61 2 chr17 75248878 75249098 -14255455 - MIR SINE MIR 0 262 32 557 278 6 25 chr17 75249582 75249744 -14254809 + MIR3 SINE MIR 44 202 -6 244 395 0 0 chr17 75250812 75250898 -14253655 + MIR3 SINE MIR 87 172 -36 2473 65 0 3 chr17 75251447 75251754 -14252799 - AluY SINE Alu -5 306 1 225 0 0 0 chr17 75252501 75252526 -14252027 + (T)n Simple_repeat Simple_repeat 1 25 0 3114 105 48 6 chr17 75252848 75253326 -14251227 - L1P4 LINE L1 -410 5751 5254 2872 172 7 4 chr17 75253321 75253862 -14250691 + L1P4 LINE L1 4737 5279 -867 * 8063 236 17 26 chr17 75253861 75257004 -14247549 - L1PA13 LINE L1 -2304 4493 1324 1464 331 22 34 chr17 75257085 75257708 -14246845 - L1PA13 LINE L1 -6170 617 2 386 244 57 32 chr17 75259100 75259223 -14245330 - LTR67 LTR ERVL -5 552 427 2194 138 30 25 chr17 75259525 75259887 -14244666 - THE1B LTR MaLR 0 364 1 2365 133 22 5 chr17 75259954 75260323 -14244230 - THE1C LTR MaLR 0 375 1 511 285 77 121 chr17 75262198 75262728 -14241825 - L2 LINE L2 -1 3312 2806 449 62 15 0 chr17 75262775 75262840 -14241713 + (TA)n Simple_repeat Simple_repeat 1 66 0 2583 37 0 0 chr17 75263054 75263352 -14241201 - AluY SINE Alu -13 298 1 25 51 0 0 chr17 75264131 75264170 -14240383 + AT_rich Low_complexity Low_complexity 1 39 0 229 359 55 16 chr17 75264224 75264352 -14240201 + MIR SINE MIR 20 152 -110 2101 131 0 3 chr17 75265564 75265862 -14238691 - AluSq SINE Alu -16 297 1 3208 214 36 14 chr17 75265991 75266765 -14237788 + L1MB8 LINE L1 5341 6131 -47 2100 102 0 75 chr17 75267370 75267704 -14236849 - AluSx SINE Alu -3 309 1 397 247 11 11 chr17 75268048 75268141 -14236412 + MER5A DNA MER1_type 14 106 -83 1339 148 72 24 chr17 75268317 75268607 -14235946 - L1MA8 LINE L1 -20 6271 5968 486 306 50 55 chr17 75270128 75270471 -14234082 + L2 LINE L2 1431 1771 -1543 30 27 0 0 chr17 75270711 75270748 -14233805 + AT_rich Low_complexity Low_complexity 1 37 0 2337 82 3 22 chr17 75271137 75271453 -14233100 - AluSp SINE Alu 0 313 4 242 384 61 20 chr17 75272249 75272705 -14231848 + L2 LINE L2 1792 2266 -1048 391 262 41 41 chr17 75272766 75272911 -14231642 - L2 LINE L2 0 3313 3169 374 271 195 14 chr17 75273101 75273322 -14231231 + MIR SINE MIR 2 262 0 515 183 62 4 chr17 75273371 75273486 -14231067 + MER33 DNA MER1_type 1 108 -98 894 224 9 4 chr17 75273684 75273916 -14230637 + MER33 DNA MER1_type 130 362 -1 25 31 0 0 chr17 75274854 75274886 -14229667 + AT_rich Low_complexity Low_complexity 1 32 0 741 166 0 50 chr17 75274995 75275134 -14229419 + FLAM_A SINE Alu 1 132 -1 582 281 36 42 chr17 75275892 75275979 -14228574 - L1ME4a LINE L1 -240 5881 5795 1009 203 0 78 chr17 75275979 75276221 -14228332 - MER58A DNA MER1_type 0 224 2 582 281 36 42 chr17 75276221 75276439 -14228114 - L1ME4a LINE L1 -326 5795 5578 228 160 20 20 chr17 75276441 75276491 -14228062 + L1ME4a LINE L1 5542 5591 -593 181 146 0 55 chr17 75276649 75276704 -14227849 + (TTTTTA)n Simple_repeat Simple_repeat 3 54 0 867 283 8 20 chr17 75276790 75277034 -14227519 + MIR SINE MIR 18 258 -4 1748 164 3 17 chr17 75277235 75277527 -14227026 + AluSx SINE Alu 5 292 -20 264 332 35 90 chr17 75278213 75278502 -14226051 - L2 LINE L2 -15 3257 2985 240 257 14 14 chr17 75279209 75279279 -14225274 - MIR3 SINE MIR -39 169 100 6059 162 22 4 chr17 75279402 75280463 -14224090 - L1MC1 LINE L1 0 6613 5534 1870 180 49 96 chr17 75280470 75280980 -14223573 - L1MC1 LINE L1 -5856 570 85 2700 163 48 98 chr17 75280990 75281701 -14222852 - LTR8 LTR ERV1 -16 675 1 198 0 0 0 chr17 75282395 75282417 -14222136 + (TGG)n Simple_repeat Simple_repeat 1 22 0 898 225 127 35 chr17 75283760 75284075 -14220478 + MER2 DNA MER2_type 1 344 0 243 320 51 115 chr17 75284170 75284423 -14220130 - L2 LINE L2 -4 3268 3032 189 0 0 0 chr17 75284744 75284765 -14219788 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 2009 124 10 3 chr17 75285449 75285739 -14218814 + AluSq SINE Alu 1 292 -21 34 0 0 0 chr17 75285742 75285776 -14218777 + AT_rich Low_complexity Low_complexity 1 34 0 2292 52 3 14 chr17 75286065 75286405 -14218148 + AluY SINE Alu 4 311 0 447 313 73 16 chr17 75287280 75287472 -14217081 + MIR SINE MIR 60 262 0 290 172 31 0 chr17 75288037 75288101 -14216452 + (CATATA)n Simple_repeat Simple_repeat 1 66 0 464 339 40 6 chr17 75288816 75288990 -14215563 - MIR3 SINE MIR -7 201 22 1019 194 17 0 chr17 75289771 75289951 -14214602 - AluJb SINE Alu 0 312 130 2380 94 0 0 chr17 75289965 75290272 -14214281 + AluY SINE Alu 1 307 -4 710 130 30 53 chr17 75290309 75290440 -14214113 + FRAM SINE Alu 41 168 -8 720 160 0 17 chr17 75290445 75290564 -14213989 - FLAM_C SINE Alu -26 117 1 825 62 15 15 chr17 75291145 75291275 -14213278 + (TTTC)n Simple_repeat Simple_repeat 2 131 0 366 42 0 0 chr17 75291454 75291502 -14213051 + (TA)n Simple_repeat Simple_repeat 2 49 0 2136 107 6 19 chr17 75291940 75292283 -14212270 - AluSp SINE Alu 0 339 1 32 57 0 0 chr17 75293662 75293715 -14210838 + AT_rich Low_complexity Low_complexity 1 53 0 1727 159 15 0 chr17 75293721 75293991 -14210562 - AluJo SINE Alu -38 274 1 2426 70 7 0 chr17 75294086 75294386 -14210167 - AluY SINE Alu -9 302 1 180 0 0 0 chr17 75295103 75295123 -14209430 + (TG)n Simple_repeat Simple_repeat 2 21 0 209 119 24 0 chr17 75296072 75296114 -14208439 + (TG)n Simple_repeat Simple_repeat 1 43 0 318 330 0 18 chr17 75296831 75296940 -14207613 - L2 LINE L2 0 3313 3207 391 299 75 46 chr17 75296995 75297169 -14207384 - MIR3 SINE MIR -27 181 3 251 289 13 13 chr17 75297830 75297906 -14206647 + GA-rich Low_complexity Low_complexity 2 77 0 721 193 0 0 chr17 75299892 75300006 -14204547 + FLAM_A SINE Alu 1 114 -19 25 0 0 0 chr17 75300016 75300041 -14204512 + AT_rich Low_complexity Low_complexity 1 25 0 26 74 0 0 chr17 75300157 75300211 -14204342 + AT_rich Low_complexity Low_complexity 1 54 0 900 230 34 38 chr17 75300386 75300677 -14203876 - MER58B DNA MER1_type -15 326 37 548 261 51 0 chr17 75301689 75301827 -14202726 - MIR SINE MIR -100 162 18 231 313 0 0 chr17 75304489 75304553 -14200000 - MLT1F LTR MaLR -477 65 2 775 275 57 22 chr17 75304561 75304790 -14199763 - L2 LINE L2 -243 3070 2834 218 226 226 0 chr17 75306228 75306312 -14198241 - L2 LINE L2 -2 3270 3168 2124 177 30 45 chr17 75306621 75307090 -14197463 - MLT2C2 LTR ERVL -2 462 1 2207 135 0 0 chr17 75307285 75307596 -14196957 - AluSx SINE Alu 0 312 2 23 0 0 0 chr17 75308018 75308041 -14196512 + AT_rich Low_complexity Low_complexity 1 23 0 211 179 0 36 chr17 75309043 75309099 -14195454 + A-rich Low_complexity Low_complexity 2 55 0 261 0 0 0 chr17 75309401 75309430 -14195123 + (TG)n Simple_repeat Simple_repeat 2 30 0 209 336 123 8 chr17 75310432 75310554 -14193999 + MIR3 SINE MIR 9 144 -64 959 143 0 0 chr17 75310665 75310791 -14193762 - AluSg/x SINE Alu -28 284 159 203 100 80 0 chr17 75310791 75310841 -14193712 + (TA)n Simple_repeat Simple_repeat 1 54 0 192 211 23 23 chr17 75310870 75310991 -14193562 + (TA)n Simple_repeat Simple_repeat 1 124 -4 1984 169 27 0 chr17 75310991 75311329 -14193224 + MER7A DNA MER2_type 2 346 0 192 211 23 23 chr17 75311329 75311335 -14193218 + (TA)n Simple_repeat Simple_repeat 123 128 0 964 294 121 33 chr17 75311335 75311887 -14192666 - MLT2F LTR ERVL -62 601 1 25 0 0 0 chr17 75312421 75312446 -14192107 + AT_rich Low_complexity Low_complexity 1 25 0 459 285 183 5 chr17 75312883 75313069 -14191484 - MIR SINE MIR -32 230 12 183 329 91 57 chr17 75314426 75314487 -14190066 - MIR SINE MIR 0 262 205 1948 131 0 30 chr17 75314487 75314784 -14189769 - AluSx SINE Alu -6 306 19 183 329 91 57 chr17 75314784 75314932 -14189621 - MIR SINE MIR -57 205 46 2124 111 0 17 chr17 75315014 75315324 -14189229 + AluSx SINE Alu 1 305 0 846 93 0 57 chr17 75315508 75315648 -14188905 + AluSg/x SINE Alu 179 310 0 1912 156 21 29 chr17 75315754 75316094 -14188459 - MER1B DNA MER1_type 0 337 1 23 0 0 0 chr17 75316928 75316951 -14187602 + AT_rich Low_complexity Low_complexity 1 23 0 195 42 0 0 chr17 75319193 75319217 -14185336 + (CA)n Simple_repeat Simple_repeat 2 25 0 2224 191 78 21 chr17 75320049 75320084 -14184469 - MLT2B2 LTR ERVL 0 515 483 848 16 57 0 chr17 75320084 75320207 -14184346 + (TAGA)n Simple_repeat Simple_repeat 4 133 0 2224 191 78 21 chr17 75320207 75320657 -14183896 - MLT2B2 LTR ERVL -32 483 2 1623 171 117 28 chr17 75320772 75321200 -14183353 - MLT1C LTR MaLR -1 466 1 1702 216 19 8 chr17 75322817 75323271 -14181282 + MER89 LTR ERV1 1 559 0 2579 64 0 3 chr17 75323465 75323777 -14180776 - AluY SINE Alu 0 311 1 221 359 51 28 chr17 75323979 75324196 -14180357 + MIR SINE MIR 41 262 0 202 292 240 7 chr17 75325191 75325345 -14179208 + L2 LINE L2 1294 1483 -1831 188 290 155 92 chr17 75325492 75325699 -14178854 + L2 LINE L2 2640 2859 -455 21 0 0 0 chr17 75325725 75325746 -14178807 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr17 75326439 75326475 -14178078 + AT_rich Low_complexity Low_complexity 1 36 0 633 249 42 5 chr17 75326513 75326702 -14177851 - MER63A DNA MER1_type -7 203 8 515 294 21 92 chr17 75326858 75327185 -14177368 + L3 LINE CR1 1198 1501 -76 443 257 74 14 chr17 75328136 75328284 -14176269 - MIR SINE MIR -5 257 101 971 188 53 14 chr17 75328698 75328906 -14175647 + MER20 DNA MER1_type 2 217 -2 1158 106 0 0 chr17 75329179 75329330 -14175223 - AluSg/x SINE Alu -17 295 145 2456 83 0 0 chr17 75329810 75330112 -14174441 - AluSg SINE Alu 0 310 9 654 294 44 18 chr17 75330243 75330518 -14174035 + L2 LINE L2 1705 1986 -1328 955 193 12 0 chr17 75330521 75330692 -14173861 - AluJb SINE Alu -4 308 136 660 149 35 0 chr17 75330696 75330870 -14173683 + (TA)n Simple_repeat Simple_repeat 1 180 0 234 130 0 0 chr17 75330878 75330924 -14173629 - LTR66 LTR ERVL -171 439 394 * 242 109 0 0 chr17 75330884 75330930 -14173623 + LTR66 LTR ERVL 394 439 -171 851 152 0 0 chr17 75330936 75331061 -14173492 - FLAM_C SINE Alu -18 125 1 1075 302 55 10 chr17 75331062 75331479 -14173074 + L2 LINE L2 1983 2418 -896 1637 173 0 88 chr17 75331518 75331859 -14172694 - AluJo SINE Alu 0 312 2 21 0 0 0 chr17 75333807 75333828 -14170725 + AT_rich Low_complexity Low_complexity 1 21 0 185 170 43 21 chr17 75334031 75334078 -14170475 - MIR SINE MIR -106 156 109 268 307 95 22 chr17 75334699 75334836 -14169717 - MIR SINE MIR -87 175 29 22 0 0 0 chr17 75335274 75335296 -14169257 + AT_rich Low_complexity Low_complexity 1 22 0 329 377 124 4 chr17 75335435 75335708 -14168845 - L3 LINE CR1 -1 1576 1271 207 200 33 67 chr17 75335775 75335835 -14168718 + L2 LINE L2 3207 3264 -8 317 343 82 0 chr17 75336815 75336961 -14167592 + MIR SINE MIR 84 241 -21 180 0 0 0 chr17 75338077 75338097 -14166456 + (CA)n Simple_repeat Simple_repeat 1 20 0 2069 126 51 31 chr17 75339206 75339562 -14164991 + THE1B LTR MaLR 1 363 -1 26 82 0 0 chr17 75340342 75340403 -14164150 + AT_rich Low_complexity Low_complexity 1 61 0 214 342 58 25 chr17 75342556 75342686 -14161867 - MIR SINE MIR -65 143 46 464 317 103 28 chr17 75343753 75344113 -14160440 - L1ME4a LINE L1 -173 5948 5562 4463 138 26 9 chr17 75344240 75345054 -14159499 + L1PA16 LINE L1 5333 6160 -6 420 372 74 19 chr17 75345308 75345523 -14159030 - L2 LINE L2 0 3272 3046 367 180 0 0 chr17 75345539 75345600 -14158953 - MER58A DNA MER1_type -32 192 132 1759 121 76 125 chr17 75345720 75345801 -14158752 - MSTA LTR MaLR -2 426 343 1555 75 19 0 chr17 75345801 75346039 -14158514 + L1PA7 LINE L1 5937 6178 0 1759 121 76 125 chr17 75346039 75346404 -14158149 - MSTA LTR MaLR -85 343 1 8937 164 35 12 chr17 75346404 75348018 -14156535 - MSTA-int LTR MaLR 0 1651 1 1849 168 68 59 chr17 75348018 75348442 -14156111 - MSTA LTR MaLR 0 428 1 395 235 84 41 chr17 75348442 75348825 -14155728 - LTR48B LTR ERV1 -68 719 128 289 214 122 20 chr17 75348806 75348904 -14155649 - MER39 LTR ERV1 -592 115 8 * 405 234 56 0 chr17 75348921 75349028 -14155525 - MER58A DNA MER1_type 0 115 3 430 313 202 21 chr17 75349079 75349242 -14155311 - L2 LINE L2 -448 2866 2734 1624 152 12 100 chr17 75349242 75349572 -14154981 + AluSx SINE Alu 1 301 -11 430 313 202 21 chr17 75349572 75349740 -14154813 - L2 LINE L2 -580 2734 2475 2154 107 0 13 chr17 75349771 75350071 -14154482 - AluSx SINE Alu -16 296 1 451 365 59 20 chr17 75350511 75350815 -14153738 + L2 LINE L2 2553 2868 -446 273 369 0 27 chr17 75350959 75351070 -14153483 + L2 LINE L2 2932 3039 -233 282 277 155 13 chr17 75351151 75351306 -14153247 - MIR SINE MIR -20 242 66 1837 168 6 16 chr17 75352579 75352894 -14151659 + AluJo SINE Alu 1 312 0 2525 189 3 75 chr17 75353119 75353243 -14151310 - MER41C LTR ERV1 0 554 423 2326 92 0 10 chr17 75353243 75353549 -14151004 + AluSc SINE Alu 1 303 -6 2525 189 3 75 chr17 75353549 75354021 -14150532 - MER41C LTR ERV1 -131 423 1 403 328 108 9 chr17 75354036 75354268 -14150285 - MIR SINE MIR -6 256 2 2161 142 30 20 chr17 75356345 75356739 -14147814 - MER48 LTR ERV1 0 398 1 438 20 0 0 chr17 75357493 75357544 -14147009 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 267 103 0 0 chr17 75358789 75358828 -14145725 + (A)n Simple_repeat Simple_repeat 1 39 0 243 250 9 19 chr17 75362510 75362618 -14141935 + T-rich Low_complexity Low_complexity 3 109 0 1778 92 21 0 chr17 75364314 75364554 -14139999 - AluSg/x SINE Alu -2 310 66 2076 99 34 3 chr17 75366793 75367085 -14137468 + AluSx SINE Alu 1 301 -11 235 331 24 14 chr17 75367475 75367601 -14136952 + MIR SINE MIR 12 140 -68 901 266 20 25 chr17 75367627 75367674 -14136879 + MIR SINE MIR 18 64 -198 1949 125 0 73 chr17 75367674 75368023 -14136530 - AluSx SINE Alu 0 312 1 901 266 20 25 chr17 75368023 75368219 -14136334 + MIR SINE MIR 64 260 -2 286 272 30 95 chr17 75368914 75369083 -14135470 + MIR SINE MIR 3 160 -102 1334 238 102 14 chr17 75369091 75369453 -14135100 - MSTD LTR MaLR -2 394 1 267 225 0 0 chr17 75369498 75369569 -14134984 + (TA)n Simple_repeat Simple_repeat 2 72 0 209 346 75 15 chr17 75369803 75369936 -14134617 + MIR3 SINE MIR 42 182 -26 1734 196 17 6 chr17 75370023 75370375 -14134178 + MLT1A1 LTR MaLR 1 356 -9 2179 75 0 0 chr17 75370927 75371234 -14133319 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 75371588 75371616 -14132937 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 75372773 75372802 -14131751 + AT_rich Low_complexity Low_complexity 1 29 0 225 94 0 0 chr17 75372885 75372917 -14131636 + (GA)n Simple_repeat Simple_repeat 1 32 0 267 304 6 32 chr17 75372979 75373137 -14131416 + CT-rich Low_complexity Low_complexity 1 154 0 609 323 41 18 chr17 75373163 75373383 -14131170 + MIR SINE MIR 38 262 0 390 162 9 19 chr17 75373692 75373797 -14130756 + CT-rich Low_complexity Low_complexity 3 106 0 234 354 10 20 chr17 75373877 75373976 -14130577 - L2 LINE L2 -33 3280 3183 2139 104 0 14 chr17 75373977 75374266 -14130287 + AluSx SINE Alu 1 285 -27 382 99 55 0 chr17 75374266 75374357 -14130196 + (TA)n Simple_repeat Simple_repeat 1 96 0 1439 194 49 22 chr17 75374407 75374731 -14129822 + MER7A DNA MER2_type 16 346 0 350 332 131 20 chr17 75374736 75374935 -14129618 - L2 LINE L2 -172 3141 2921 * 1078 309 133 65 chr17 75374926 75375105 -14129448 - L2 LINE L2 -912 2402 2237 544 62 25 0 chr17 75375105 75375186 -14129367 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 1078 309 133 65 chr17 75375186 75375354 -14129199 - L2 LINE L2 -1077 2237 2082 2276 170 14 45 chr17 75375354 75375800 -14128753 - MSTB1 LTR MaLR 0 432 1 1078 309 133 65 chr17 75375800 75376529 -14128024 - L2 LINE L2 -1232 2082 1252 1709 185 3 17 chr17 75376541 75376843 -14127710 - AluJb SINE Alu -14 298 1 888 128 8 0 chr17 75376843 75376968 -14127585 - AluJb SINE Alu -177 135 10 206 182 0 45 chr17 75376982 75377026 -14127527 - L2 LINE L2 -2094 1220 1179 593 142 106 26 chr17 75377732 75377845 -14126708 - FLAM_C SINE Alu 0 143 22 1632 167 45 39 chr17 75378844 75379179 -14125374 + MER1B DNA MER1_type 1 337 0 1541 215 0 17 chr17 75379548 75379872 -14124681 - AluJb SINE Alu 0 319 1 278 240 52 21 chr17 75381285 75381381 -14123172 + MLT1J LTR MaLR 376 474 -37 508 167 11 132 chr17 75381430 75381604 -14122949 - MER96B DNA MER1_type? -264 153 1 2798 3 0 0 chr17 75381701 75382001 -14122552 + AluY SINE Alu 8 307 -4 2664 55 0 0 chr17 75382517 75382826 -14121727 + AluY SINE Alu 1 309 -2 1774 151 36 0 chr17 75382857 75383135 -14121418 - AluJb SINE Alu -15 297 10 2367 94 0 0 chr17 75383209 75383508 -14121045 - AluSg1 SINE Alu -10 299 1 187 217 167 0 chr17 75383515 75383575 -14120978 - MIR SINE MIR -113 149 80 1180 250 36 21 chr17 75383655 75383991 -14120562 - MER58B DNA MER1_type 0 341 1 2353 56 0 0 chr17 75384284 75384590 -14119963 - AluY SINE Alu 0 306 1 21 0 0 0 chr17 75385403 75385424 -14119129 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 75387465 75387488 -14117065 + AT_rich Low_complexity Low_complexity 1 23 0 655 244 86 112 chr17 75389991 75390305 -14114248 + L1ME4a LINE L1 5592 5888 -233 894 136 8 0 chr17 75390305 75390437 -14114116 + FLAM_C SINE Alu 1 133 0 655 244 86 112 chr17 75390437 75390647 -14113906 + L1ME4a LINE L1 5888 6102 -19 3137 22 0 0 chr17 75390722 75391086 -14113467 - L1PA2 LINE L1 0 6155 5792 1964 9 0 0 chr17 75391086 75391317 -14113236 + L1PA2 LINE L1 5572 5802 -353 2883 3 0 0 chr17 75391393 75391704 -14112849 + AluYa5 SINE Alu 1 311 0 21 71 0 0 chr17 75394634 75394676 -14109877 + AT_rich Low_complexity Low_complexity 1 42 0 234 0 0 0 chr17 75396144 75396170 -14108383 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 35 0 0 chr17 75397015 75397044 -14107509 + GC_rich Low_complexity Low_complexity 1 29 0 182 114 0 29 chr17 75398841 75398876 -14105677 + (CCCCCT)n Simple_repeat Simple_repeat 4 37 0 225 0 0 0 chr17 75399907 75399932 -14104621 + (A)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr17 75405622 75405647 -14098906 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr17 75406659 75406693 -14097860 + (T)n Simple_repeat Simple_repeat 1 34 0 35 54 0 0 chr17 75407578 75407634 -14096919 + AT_rich Low_complexity Low_complexity 1 56 0 904 252 9 9 chr17 75408079 75408297 -14096256 - MER58A DNA MER1_type -6 218 1 746 323 27 0 chr17 75408575 75408798 -14095755 - MIR SINE MIR -30 232 4 21 0 0 0 chr17 75409269 75409290 -14095263 + AT_rich Low_complexity Low_complexity 1 21 0 609 209 9 0 chr17 75409774 75409884 -14094669 + MER81 DNA DNA 3 113 -1 189 298 0 0 chr17 75410805 75410852 -14093701 - MIR SINE MIR 0 262 216 266 315 51 62 chr17 75410894 75411151 -14093402 - MARNA DNA Mariner -107 479 226 333 125 0 0 chr17 75411344 75411400 -14093153 + (TC)n Simple_repeat Simple_repeat 2 57 0 637 210 11 15 chr17 75412017 75412292 -14092261 + CT-rich Low_complexity Low_complexity 1 273 0 504 254 77 33 chr17 75415452 75415633 -14088920 - L1ME1 LINE L1 -13 6153 5965 738 193 0 0 chr17 75415719 75415869 -14088684 - L1MA6 LINE L1 -10 6290 6141 1168 301 80 10 chr17 75415932 75416431 -14088122 + LTR26 LTR ERV1 70 603 0 4737 146 6 25 chr17 75416432 75417281 -14087272 - L1MA6 LINE L1 -162 6138 5306 233 245 0 85 chr17 75417314 75417408 -14087145 + LTR26B LTR ERV1 330 415 -116 1539 172 14 3 chr17 75417439 75417736 -14086817 - L1MA6 LINE L1 -867 5279 4980 219 167 0 0 chr17 75418060 75418102 -14086451 + (TA)n Simple_repeat Simple_repeat 2 43 0 234 0 0 0 chr17 75418845 75418871 -14085682 + (T)n Simple_repeat Simple_repeat 1 26 0 297 89 0 0 chr17 75419596 75419641 -14084912 + (CA)n Simple_repeat Simple_repeat 2 46 0 22 0 0 0 chr17 75419921 75419943 -14084610 + AT_rich Low_complexity Low_complexity 1 22 0 721 293 116 57 chr17 75420019 75420770 -14083783 - L1M4 LINE L1 -3104 3042 2248 526 270 7 7 chr17 75421447 75421486 -14083067 - MER5A DNA MER1_type -51 138 100 2287 77 0 0 chr17 75421486 75421772 -14082781 - AluY SINE Alu -1 310 25 526 270 7 7 chr17 75421772 75421869 -14082684 - MER5A DNA MER1_type -88 101 2 198 103 0 0 chr17 75422218 75422247 -14082306 + (A)n Simple_repeat Simple_repeat 1 29 0 1277 128 19 0 chr17 75422412 75422623 -14081930 + L1PA16 LINE L1 5952 6166 0 185 435 26 13 chr17 75422758 75422912 -14081641 - L2 LINE L2 -249 3023 2868 1036 186 21 0 chr17 75422914 75423107 -14081446 + MER20 DNA MER1_type 23 219 0 1657 190 3 3 chr17 75423298 75423619 -14080934 + AluJo SINE Alu 1 321 0 195 355 0 0 chr17 75423681 75423743 -14080810 - L2 LINE L2 -666 2648 2587 2309 92 0 0 chr17 75424746 75425074 -14079479 + AluSg SINE Alu 1 328 0 3216 184 15 20 chr17 75426672 75427320 -14077233 - L1PA16 LINE L1 0 6166 5522 2441 64 0 0 chr17 75428312 75428608 -14075945 - AluY SINE Alu -15 296 1 830 233 57 22 chr17 75428656 75428884 -14075669 - MIR SINE MIR -26 236 1 24 53 0 0 chr17 75429445 75429483 -14075070 + AT_rich Low_complexity Low_complexity 1 38 0 249 214 18 18 chr17 75430410 75430466 -14074087 + L2 LINE L2 3215 3270 -2 428 326 21 0 chr17 75430977 75431118 -14073435 + MIR SINE MIR 99 242 -20 339 315 46 8 chr17 75431528 75431658 -14072895 + MER20B DNA MER1_type 6 140 -643 22 0 0 0 chr17 75431764 75431786 -14072767 + AT_rich Low_complexity Low_complexity 1 22 0 2227 119 0 0 chr17 75433544 75433847 -14070706 - AluSx SINE Alu -9 303 1 1853 164 7 3 chr17 75434048 75434353 -14070200 - AluJb SINE Alu -4 308 3 28 0 0 0 chr17 75435123 75435151 -14069402 + AT_rich Low_complexity Low_complexity 1 28 0 250 207 90 63 chr17 75435201 75435312 -14069241 + L1ME4a LINE L1 5982 6095 -26 273 364 63 26 chr17 75435744 75436229 -14068324 + L2 LINE L2 2446 3007 -265 775 264 69 37 chr17 75436404 75436650 -14067903 - MIR SINE MIR -5 257 4 31 44 0 0 chr17 75437532 75437577 -14066976 + AT_rich Low_complexity Low_complexity 1 45 0 370 240 7 7 chr17 75438424 75438570 -14065983 + CT-rich Low_complexity Low_complexity 2 147 0 187 333 40 60 chr17 75438651 75438760 -14065793 + L3 LINE CR1 1272 1379 -198 2295 96 3 0 chr17 75438760 75439063 -14065490 + AluSg SINE Alu 1 304 -6 187 333 40 60 chr17 75439063 75439103 -14065450 + L3 LINE CR1 1379 1418 -159 21 0 0 0 chr17 75439121 75439142 -14065411 + AT_rich Low_complexity Low_complexity 1 21 0 316 218 182 0 chr17 75439142 75439252 -14065301 - MIR SINE MIR 0 262 133 21 0 0 0 chr17 75439650 75439671 -14064882 + AT_rich Low_complexity Low_complexity 1 21 0 2261 132 3 40 chr17 75440018 75440348 -14064205 + THE1B LTR MaLR 1 317 -47 2360 70 0 24 chr17 75440348 75440646 -14063907 - AluY SINE Alu -18 293 3 2261 132 3 40 chr17 75440646 75440693 -14063860 + THE1B LTR MaLR 317 364 0 9950 114 48 3 chr17 75440693 75442206 -14062347 + THE1B-int LTR MaLR 1 1580 0 2230 156 3 8 chr17 75442206 75442572 -14061981 + THE1B LTR MaLR 1 364 0 28 29 0 0 chr17 75442588 75442623 -14061930 + AT_rich Low_complexity Low_complexity 1 35 0 565 209 11 17 chr17 75445283 75445460 -14059093 + CT-rich Low_complexity Low_complexity 2 177 0 801 244 0 17 chr17 75446055 75446231 -14058322 + MER58A DNA MER1_type 46 218 -6 1072 308 85 67 chr17 75447780 75448449 -14056104 - MER115 DNA AcHobo -10 683 3 528 322 81 21 chr17 75449973 75450209 -14054344 - MIR SINE MIR -1 261 12 22 0 0 0 chr17 75451161 75451183 -14053370 + AT_rich Low_complexity Low_complexity 1 22 0 384 76 89 32 chr17 75451183 75451340 -14053213 + (TATAA)n Simple_repeat Simple_repeat 1 166 0 2187 114 0 0 chr17 75451581 75451878 -14052675 + AluSc SINE Alu 1 297 -12 188 0 74 0 chr17 75453181 75453208 -14051345 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2069 136 0 0 chr17 75454338 75454632 -14049921 - AluSx SINE Alu -18 294 1 65 0 0 0 chr17 75454713 75454778 -14049775 + AT_rich Low_complexity Low_complexity 1 65 0 224 349 40 32 chr17 75455705 75455831 -14048722 - MIR3 SINE MIR -52 156 30 258 105 0 0 chr17 75455896 75455934 -14048619 + (CA)n Simple_repeat Simple_repeat 1 38 0 1284 155 0 5 chr17 75455962 75456175 -14048378 - AluJb SINE Alu -19 293 82 198 118 0 0 chr17 75456866 75456900 -14047653 + (TG)n Simple_repeat Simple_repeat 2 35 0 310 161 21 42 chr17 75456906 75457049 -14047504 + (CAGAGA)n Simple_repeat Simple_repeat 3 142 0 243 0 0 0 chr17 75458030 75458057 -14046496 + (T)n Simple_repeat Simple_repeat 1 27 0 2141 107 13 0 chr17 75458082 75458381 -14046172 - AluSp SINE Alu -10 303 1 312 27 0 0 chr17 75459261 75459298 -14045255 + (CA)n Simple_repeat Simple_repeat 2 38 0 657 268 112 13 chr17 75459322 75459546 -14045007 + MIR SINE MIR 2 247 -15 525 318 78 57 chr17 75459566 75459680 -14044873 - L2 LINE L2 -696 2618 2508 2336 82 110 0 chr17 75459680 75460008 -14044545 - THE1B LTR MaLR 0 364 1 525 318 78 57 chr17 75460008 75460434 -14044119 - L2 LINE L2 -806 2508 2067 231 305 24 0 chr17 75460442 75460524 -14044029 + L1ME LINE L1 137 220 -5985 588 287 104 67 chr17 75460616 75461232 -14043321 + L1ME LINE L1 165 803 -5593 476 299 51 30 chr17 75461255 75461654 -14042899 + L1ME LINE L1 774 1403 -4812 2876 177 26 9 chr17 75461654 75462226 -14042327 + L1MB3 LINE L1 5585 6166 -17 643 261 34 102 chr17 75462676 75463286 -14041267 + L1MDa LINE L1 1463 2031 -4509 262 327 56 9 chr17 75463303 75463410 -14041143 + MLT1I LTR MaLR 162 273 -136 950 78 16 0 chr17 75463480 75463608 -14040945 + MLT2A1 LTR ERVL 1 130 -314 * 1378 113 0 57 chr17 75463581 75463810 -14040743 + MLT2A1 LTR ERVL 71 286 -158 392 75 0 0 chr17 75463813 75463866 -14040687 + MLT2A1 LTR ERVL 392 444 0 257 274 121 40 chr17 75464014 75464138 -14040415 + L2 LINE L2 3180 3313 0 1916 276 161 16 chr17 75464382 75464730 -14039823 - L2 LINE L2 -586 2728 2432 6526 74 20 0 chr17 75464730 75465890 -14038663 - L1PA8 LINE L1 -3 6169 5003 1916 276 161 16 chr17 75465890 75466367 -14038186 - L2 LINE L2 -882 2432 1783 28 29 0 0 chr17 75467695 75467730 -14036823 + AT_rich Low_complexity Low_complexity 1 35 0 200 274 18 53 chr17 75467998 75468111 -14036442 - MIR SINE MIR -7 255 147 24 100 0 0 chr17 75468629 75468709 -14035844 + AT_rich Low_complexity Low_complexity 1 80 0 2349 225 40 13 chr17 75471148 75471669 -14032884 - MLT1F LTR MaLR -5 537 3 21 0 0 0 chr17 75471683 75471704 -14032849 + AT_rich Low_complexity Low_complexity 1 21 0 318 161 32 0 chr17 75471924 75471986 -14032567 - MIR SINE MIR -126 136 73 288 346 115 12 chr17 75472048 75472291 -14032262 - LTR33 LTR ERVL -18 503 236 248 292 90 22 chr17 75472973 75473062 -14031491 + L2 LINE L2 3178 3272 0 570 184 0 10 chr17 75473182 75473285 -14031268 + AluJb SINE Alu 201 302 -10 656 307 59 0 chr17 75473291 75473493 -14031060 - MIR SINE MIR -18 244 31 183 284 60 52 chr17 75473508 75473624 -14030929 + L2 LINE L2 2232 2348 -966 25 31 0 0 chr17 75474450 75474482 -14030071 + AT_rich Low_complexity Low_complexity 1 32 0 676 311 28 49 chr17 75474701 75474987 -14029566 + L1MEd LINE L1 275 554 -5565 467 176 12 12 chr17 75475194 75475279 -14029274 + MER5A DNA MER1_type 26 110 -79 904 254 30 17 chr17 75475309 75475545 -14029008 + MER8 DNA MER2_type 1 239 0 521 270 44 87 chr17 75475570 75476136 -14028417 + L1MEd LINE L1 716 1257 -4862 334 274 141 34 chr17 75476183 75476262 -14028291 + L1MEd LINE L1 1348 1417 -4893 2079 151 0 3 chr17 75476262 75476574 -14027979 + AluSx SINE Alu 1 311 -1 334 274 141 34 chr17 75476574 75476728 -14027825 + L1MEd LINE L1 1417 1606 -4704 293 254 28 14 chr17 75476775 75476846 -14027707 + MER5A DNA MER1_type 23 94 -95 1481 199 6 29 chr17 75476896 75477207 -14027346 - AluJo SINE Alu -8 304 1 298 284 49 12 chr17 75477209 75477290 -14027263 - MER5A DNA MER1_type -80 109 26 657 95 32 0 chr17 75477896 75477991 -14026562 - AluY SINE Alu -8 303 206 481 295 154 0 chr17 75478098 75478254 -14026299 + MER5A DNA MER1_type 9 188 -1 210 281 50 86 chr17 75478486 75478625 -14025928 + MER5B DNA MER1_type 29 162 -16 447 301 164 55 chr17 75478705 75479107 -14025446 - MLT1J2 LTR MaLR -4 446 1 364 304 57 71 chr17 75479136 75479472 -14025081 + L2 LINE L2 2286 2616 -698 318 123 18 53 chr17 75479758 75479815 -14024738 - MER44D DNA MER2_type -3 702 648 294 360 108 0 chr17 75479855 75479994 -14024559 + L2 LINE L2 3107 3260 -12 1048 247 97 10 chr17 75480762 75481070 -14023483 - MER63 DNA MER1_type -264 797 463 303 333 26 26 chr17 75481243 75481399 -14023154 + MIR SINE MIR 12 167 -95 448 323 179 19 chr17 75481587 75481849 -14022704 - L2 LINE L2 -14 3299 3080 1881 212 25 52 chr17 75481849 75482368 -14022185 + MLT1D LTR MaLR 1 505 0 448 323 179 19 chr17 75482368 75482698 -14021855 - L2 LINE L2 -233 3080 2621 276 121 96 12 chr17 75483100 75483183 -14021370 - LTR37B LTR ERV1 0 468 379 24 32 0 0 chr17 75483253 75483284 -14021269 + AT_rich Low_complexity Low_complexity 1 31 0 228 273 13 0 chr17 75483671 75483748 -14020805 + (CTA)n Simple_repeat Simple_repeat 2 79 0 299 343 187 16 chr17 75484180 75484431 -14020122 + L2 LINE L2 2671 2964 -350 254 233 27 27 chr17 75485022 75485095 -14019458 - MIR3 SINE MIR -52 156 84 1680 194 3 3 chr17 75485243 75485552 -14019001 - AluJo SINE Alu -3 309 1 759 325 66 24 chr17 75485901 75486190 -14018363 - LTR16C LTR ERVL -57 434 134 24 0 0 0 chr17 75486804 75486828 -14017725 + AT_rich Low_complexity Low_complexity 1 24 0 585 254 70 67 chr17 75487352 75487636 -14016917 + L1ME LINE L1 502 786 -5284 2302 93 0 0 chr17 75487957 75488257 -14016296 + AluSg1 SINE Alu 1 300 -9 760 236 43 79 chr17 75489413 75489833 -14014720 - LTR37B LTR ERV1 -3 465 61 190 269 39 0 chr17 75490496 75490548 -14014005 - L2 LINE L2 -9 3263 3210 1821 170 41 23 chr17 75490655 75490997 -14013556 + MER7A DNA MER2_type 1 346 0 1643 94 5 5 chr17 75491045 75491268 -14013285 + AluSg/x SINE Alu 88 310 0 326 157 0 14 chr17 75491591 75491661 -14012892 + CT-rich Low_complexity Low_complexity 4 72 0 1030 93 11 22 chr17 75491675 75491857 -14012696 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 448 224 95 9 chr17 75491905 75492021 -14012532 - AluSg/x SINE Alu -51 261 136 2051 183 8 10 chr17 75492249 75492638 -14011915 - MLT1B LTR MaLR -2 388 1 255 309 179 32 chr17 75494383 75494506 -14010047 - L2 LINE L2 0 3272 3132 1937 103 19 0 chr17 75494598 75494894 -14009659 + AluSx SINE Alu 17 317 0 1694 288 86 13 chr17 75495086 75495631 -14008922 + MLT1E LTR MaLR 1 585 -8 1301 224 17 48 chr17 75496112 75496147 -14008406 - MER58B DNA MER1_type -2079 341 306 2527 188 31 23 chr17 75496147 75496662 -14007891 + MLT2B1 LTR ERVL 2 520 0 2224 116 91 13 chr17 75496665 75497062 -14007491 + MSTA LTR MaLR 1 428 0 1301 224 17 48 chr17 75497062 75497374 -14007179 - MER58B DNA MER1_type -2116 304 1 2522 44 0 3 chr17 75499630 75499927 -14004626 + AluY SINE Alu 1 296 -15 2057 119 3 14 chr17 75500506 75500792 -14003761 + AluJb SINE Alu 3 285 -27 225 344 13 20 chr17 75500792 75500984 -14003569 + (TATG)n Simple_repeat Simple_repeat 1 190 0 265 247 130 0 chr17 75501508 75501585 -14002968 + MIR3 SINE MIR 118 204 -4 408 263 11 0 chr17 75501646 75501741 -14002812 - AluSg/x SINE Alu -12 300 205 628 170 9 0 chr17 75501742 75501854 -14002699 - AluJo/FLAM SINE Alu -199 113 1 334 256 0 33 chr17 75503842 75503932 -14000621 - L1MC4 LINE L1 -1342 6700 6614 788 139 0 0 chr17 75503985 75504114 -14000439 - L1PB3 LINE L1 0 6154 6026 249 249 259 41 chr17 75504369 75504566 -13999987 + MIR SINE MIR 13 252 -10 219 355 40 0 chr17 75504693 75504769 -13999784 + L2 LINE L2 3234 3312 -1 201 359 29 0 chr17 75504765 75504868 -13999685 - L3b LINE CR1 -374 1209 1104 * 22 0 0 0 chr17 75504941 75504963 -13999590 + AT_rich Low_complexity Low_complexity 1 22 0 648 295 43 10 chr17 75505210 75505417 -13999136 + MIR SINE MIR 49 262 0 300 305 7 33 chr17 75505524 75505675 -13998878 + L1ME LINE L1 5688 5834 -287 314 325 82 12 chr17 75506959 75507126 -13997427 + MIR SINE MIR 2 181 -72 1967 157 0 10 chr17 75507696 75508008 -13996545 + AluJb SINE Alu 1 309 -3 3497 95 39 2 chr17 75509551 75510044 -13994509 + MER9 LTR ERVK 1 511 0 195 222 0 0 chr17 75510437 75510482 -13994071 + GA-rich Low_complexity Low_complexity 4 48 0 3685 159 18 18 chr17 75511731 75512468 -13992085 - L1MA7 LINE L1 -6 6285 5549 4676 186 35 16 chr17 75512474 75513618 -13990935 + L1MA7 LINE L1 4420 5582 -720 2137 110 41 39 chr17 75514075 75514438 -13990115 + THE1B LTR MaLR 1 364 0 2304 113 0 3 chr17 75514478 75514789 -13989764 + AluSx SINE Alu 1 310 -2 408 368 57 5 chr17 75514792 75515004 -13989549 + L1ME LINE L1 5477 5699 -422 425 356 19 78 chr17 75515005 75515426 -13989127 + L2 LINE L2 2847 3242 -30 797 269 11 28 chr17 75515440 75515722 -13988831 + L1MA9 LINE L1 5998 6274 -38 272 262 205 16 chr17 75516189 75516311 -13988242 - MIR SINE MIR 0 262 118 284 342 0 0 chr17 75517028 75517107 -13987446 + MIR SINE MIR 66 144 -64 23 0 0 0 chr17 75518126 75518149 -13986404 + AT_rich Low_complexity Low_complexity 1 23 0 189 338 13 0 chr17 75519166 75519243 -13985310 - L2 LINE L2 0 3313 3236 2208 68 9 74 chr17 75519314 75519640 -13984913 + AluY SINE Alu 1 305 -6 201 162 27 0 chr17 75520298 75520335 -13984218 + (CTTA)n Simple_repeat Simple_repeat 1 38 0 302 356 107 29 chr17 75520478 75520823 -13983730 - L3 LINE CR1 -709 868 497 235 299 55 39 chr17 75521195 75521322 -13983231 - MIR SINE MIR -17 245 117 5182 88 9 29 chr17 75521324 75522083 -13982470 + L1PA10 LINE L1 5415 6158 -10 21 36 0 0 chr17 75523399 75523427 -13981126 + AT_rich Low_complexity Low_complexity 1 28 0 380 312 46 0 chr17 75523934 75524043 -13980510 + MIR SINE MIR 32 145 -63 3533 159 27 6 chr17 75524045 75524707 -13979846 + L1MA4 LINE L1 5617 6292 -8 22 0 0 0 chr17 75524707 75524729 -13979824 + AT_rich Low_complexity Low_complexity 1 22 0 279 250 0 0 chr17 75524783 75524867 -13979686 + (TA)n Simple_repeat Simple_repeat 1 84 0 318 269 31 100 chr17 75524876 75525006 -13979547 + MER5B DNA MER1_type 58 178 0 2030 85 0 0 chr17 75525530 75525778 -13978775 - AluSg SINE Alu -62 248 1 2183 109 7 0 chr17 75526189 75526491 -13978062 + AluSg1 SINE Alu 1 304 -5 258 309 82 47 chr17 75526848 75527081 -13977472 - L2 LINE L2 -1218 2096 1856 2297 60 0 0 chr17 75527167 75527494 -13977059 - AluY SINE Alu 0 327 1 6153 264 85 30 chr17 75527551 75529915 -13974638 - L1MCb LINE L1 -1332 5609 2757 815 185 0 7 chr17 75529915 75530061 -13974492 - L1MC1 LINE L1 -1 6332 6188 6153 264 85 30 chr17 75530061 75531558 -13972995 - L1MCb LINE L1 -4184 2757 1344 1393 235 58 42 chr17 75531790 75532224 -13972329 - L1MCb LINE L1 -5959 464 24 513 229 92 14 chr17 75532726 75532952 -13971601 + MLT1H1 LTR MaLR 309 503 -2 21 0 0 0 chr17 75536866 75536887 -13967666 + AT_rich Low_complexity Low_complexity 1 21 0 230 255 29 78 chr17 75536927 75537029 -13967524 - MIR SINE MIR -54 208 112 2480 74 0 0 chr17 75537043 75537340 -13967213 - AluY SINE Alu -14 297 1 23 0 0 0 chr17 75538407 75538430 -13966123 + AT_rich Low_complexity Low_complexity 1 23 0 2414 115 60 14 chr17 75538706 75539124 -13965429 - L1PB2 LINE L1 -1 6150 5714 4321 59 4 0 chr17 75539596 75540142 -13964411 - L1PA6 LINE L1 -4 6150 5603 222 128 0 0 chr17 75540882 75540921 -13963632 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 311 301 212 15 chr17 75541451 75541654 -13962899 + MIR SINE MIR 20 262 0 182 240 100 80 chr17 75541926 75542026 -13962527 + L2 LINE L2 2952 3053 -219 1119 271 104 17 chr17 75542095 75542488 -13962065 - MLT1E2 LTR MaLR 0 626 184 2190 111 7 3 chr17 75542488 75542785 -13961768 - AluSc SINE Alu -9 300 3 1119 271 104 17 chr17 75542785 75542864 -13961689 - MLT1E2 LTR MaLR -442 184 113 2228 95 0 0 chr17 75543589 75543901 -13960652 - AluSg SINE Alu 0 312 1 23 0 0 0 chr17 75544701 75544724 -13959829 + AT_rich Low_complexity Low_complexity 1 23 0 325 214 20 0 chr17 75545587 75545685 -13958868 + (TA)n Simple_repeat Simple_repeat 1 100 0 2524 54 0 19 chr17 75546072 75546388 -13958165 - AluY SINE Alu -1 310 1 215 390 0 24 chr17 75547054 75547136 -13957417 - MIR SINE MIR -98 110 31 416 323 133 0 chr17 75547214 75547372 -13957181 + MIR SINE MIR 47 225 -37 353 268 48 32 chr17 75547992 75548119 -13956434 + MIR SINE MIR 30 157 -51 254 294 22 22 chr17 75549150 75549242 -13955311 - MIR SINE MIR -87 121 30 23 86 0 0 chr17 75549296 75549354 -13955199 + AT_rich Low_complexity Low_complexity 1 58 0 2110 131 3 0 chr17 75550583 75550880 -13953673 + AluSx SINE Alu 3 300 -12 1220 173 0 49 chr17 75551735 75551978 -13952575 - AluJo SINE Alu -9 303 73 2328 201 46 2 chr17 75552158 75552640 -13951913 - MLT1D LTR MaLR 0 505 3 223 374 30 30 chr17 75552787 75552953 -13951600 + L2 LINE L2 2872 3037 -235 263 389 38 27 chr17 75554143 75554405 -13950148 - L2 LINE L2 -438 2876 2612 330 26 0 0 chr17 75554710 75554749 -13949804 + (TG)n Simple_repeat Simple_repeat 1 39 0 1834 77 0 0 chr17 75555972 75556218 -13948335 - L1PA12 LINE L1 0 6168 5923 2095 114 3 0 chr17 75556960 75557250 -13947303 + AluSx SINE Alu 6 296 -16 4516 52 4 0 chr17 75558613 75559174 -13945379 + L1PA7 LINE L1 5592 6154 0 22 0 0 0 chr17 75559174 75559196 -13945357 + AT_rich Low_complexity Low_complexity 1 22 0 883 203 132 5 chr17 75559339 75559536 -13945017 + MER58A DNA MER1_type 3 224 0 2194 153 47 37 chr17 75559811 75560217 -13944336 - MSTB LTR MaLR -16 410 1 192 300 0 17 chr17 75560769 75560829 -13943724 - MIR SINE MIR -46 216 158 403 265 10 10 chr17 75560974 75561076 -13943477 - MIR SINE MIR -153 109 8 196 324 0 28 chr17 75561140 75561211 -13943342 - L2 LINE L2 -18 3254 3186 299 344 71 43 chr17 75561509 75561901 -13942652 + L2 LINE L2 1983 2385 -929 371 297 162 1 chr17 75562660 75562863 -13941690 + MIR SINE MIR 16 248 -14 747 144 8 17 chr17 75563042 75563160 -13941393 - AluJb SINE Alu -190 122 6 1553 200 18 11 chr17 75563322 75563607 -13940946 + AluJo SINE Alu 11 297 -15 623 274 76 28 chr17 75563629 75564069 -13940484 - MLT1D LTR MaLR 0 505 1 246 294 42 50 chr17 75564072 75564191 -13940362 - MIR SINE MIR -28 234 117 261 113 0 19 chr17 75564587 75564640 -13939913 - L1MA9 LINE L1 -23 6289 6238 288 290 103 45 chr17 75566093 75566248 -13938305 + MIR SINE MIR 5 168 -94 321 356 41 14 chr17 75566549 75566695 -13937858 - MIR SINE MIR -106 156 7 757 290 104 27 chr17 75566702 75567068 -13937485 + MLT1I LTR MaLR 8 401 -8 1847 159 25 20 chr17 75567189 75567273 -13937280 + MLT1A1 LTR MaLR 1 83 -282 1063 211 104 73 chr17 75567273 75567657 -13936896 + MSTD LTR MaLR 1 396 0 1847 159 25 20 chr17 75567657 75567925 -13936628 + MLT1A1 LTR MaLR 83 355 -10 338 298 0 0 chr17 75567934 75568028 -13936525 + MER63A DNA MER1_type 97 190 -20 333 260 265 20 chr17 75568563 75568767 -13935786 + MLT1J2 LTR MaLR 1 254 -196 1685 192 3 7 chr17 75569000 75569287 -13935266 + AluJo SINE Alu 3 288 -24 297 209 174 17 chr17 75569435 75569550 -13935003 + LTR16A LTR ERVL 61 193 -257 2170 115 52 25 chr17 75570355 75570720 -13933833 - THE1C LTR MaLR 0 375 1 482 350 24 20 chr17 75570927 75571166 -13933387 - MIR SINE MIR 0 262 26 260 298 0 48 chr17 75573235 75573319 -13931234 - L2 LINE L2 -7 3265 3186 413 213 0 106 chr17 75573418 75573559 -13930994 + MER20 DNA MER1_type 1 126 -93 300 191 0 117 chr17 75573722 75573816 -13930737 + MER20 DNA MER1_type 132 214 -5 629 215 110 30 chr17 75574107 75574307 -13930246 - MIR SINE MIR -14 248 33 443 253 114 13 chr17 75574388 75574546 -13930007 + MIR SINE MIR 79 252 -10 1490 207 54 46 chr17 75574969 75575360 -13929193 - MSTD LTR MaLR -2 394 1 288 0 0 0 chr17 75575446 75575478 -13929075 + (TG)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr17 75576261 75576283 -13928270 + AT_rich Low_complexity Low_complexity 1 22 0 1421 89 0 30 chr17 75576306 75576509 -13928044 + MER107 DNA MER1_type 1 197 0 220 389 22 7 chr17 75577002 75577139 -13927414 + L2 LINE L2 220 358 -2956 886 223 16 0 chr17 75577139 75577323 -13927230 - MER5A DNA MER1_type -1 188 2 5990 127 15 15 chr17 75577335 75578720 -13925833 + L1PA14 LINE L1 4775 6161 0 2024 114 46 0 chr17 75578731 75579011 -13925542 + AluSc SINE Alu 1 293 -16 610 375 41 33 chr17 75579012 75579352 -13925201 + L2 LINE L2 358 703 -2611 3727 180 29 43 chr17 75579352 75580148 -13924405 + LTR1 LTR ERV1 1 785 0 610 375 41 33 chr17 75580148 75580199 -13924354 + L2 LINE L2 703 752 -2562 229 279 72 95 chr17 75580226 75580448 -13924105 + L2 LINE L2 1068 1284 -2030 484 355 50 16 chr17 75580501 75580743 -13923810 + MIR SINE MIR 13 262 0 21 57 0 0 chr17 75581346 75581381 -13923172 + AT_rich Low_complexity Low_complexity 1 35 0 1969 97 53 40 chr17 75581910 75582210 -13922343 - AluSc SINE Alu -5 304 1 282 323 21 0 chr17 75582432 75582528 -13922025 + MIR SINE MIR 155 252 -10 630 265 105 17 chr17 75582869 75583262 -13921291 - L1ME3A LINE L1 -2 6162 5725 308 299 28 0 chr17 75583703 75583810 -13920743 - L1MEc LINE L1 -4704 1692 1583 1136 169 46 0 chr17 75585512 75585731 -13918822 - L1MA9 LINE L1 -240 6072 5844 310 312 32 49 chr17 75585769 75586016 -13918537 - HERV16 LTR ERVL -3817 1179 937 2236 116 0 0 chr17 75586063 75586355 -13918198 + AluSx SINE Alu 1 292 -20 2910 221 70 15 chr17 75587056 75587968 -13916585 - Charlie1 DNA MER1_type -166 2595 1634 2516 64 0 0 chr17 75587970 75588267 -13916286 + AluY SINE Alu 1 297 -14 1537 116 0 0 chr17 75589520 75589727 -13914826 - AluSg/x SINE Alu 0 312 106 2084 105 10 27 chr17 75590003 75590298 -13914255 - AluSp SINE Alu -23 290 1 263 359 8 34 chr17 75591004 75591121 -13913432 + MIR SINE MIR 21 134 -128 365 319 7 37 chr17 75591728 75591863 -13912690 + L2 LINE L2 3142 3272 0 989 323 35 44 chr17 75592766 75593536 -13911017 + L2 LINE L2 2545 3306 -7 330 271 132 7 chr17 75594785 75594929 -13909624 - MIR SINE MIR -16 246 85 412 280 25 17 chr17 75595157 75595275 -13909278 - L2 LINE L2 -9 3304 3186 277 127 0 70 chr17 75595946 75596017 -13908536 - MLT2B1 LTR ERVL 0 520 455 1058 219 11 69 chr17 75596057 75596331 -13908222 - MLT2B1 LTR ERVL -54 466 209 2065 120 8 46 chr17 75596340 75596706 -13907847 - THE1C LTR MaLR -23 352 1 1040 146 6 0 chr17 75596707 75596885 -13907668 - MLT2B1 LTR ERVL -308 212 34 874 311 98 11 chr17 75596994 75597466 -13907087 + LTR33 LTR ERVL 5 517 -4 1274 150 71 18 chr17 75597579 75597805 -13906748 - AluSg/x SINE Alu -8 304 67 1700 192 44 99 chr17 75597822 75598616 -13905937 - LTR8A LTR ERV1 0 727 1 316 301 116 14 chr17 75598626 75598772 -13905781 - MIR SINE MIR -61 201 41 28 0 0 0 chr17 75598802 75598830 -13905723 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 75599776 75599797 -13904756 + AT_rich Low_complexity Low_complexity 1 21 0 204 214 0 0 chr17 75600198 75600240 -13904313 + CT-rich Low_complexity Low_complexity 1 42 0 27 49 0 0 chr17 75600806 75600847 -13903706 + AT_rich Low_complexity Low_complexity 1 41 0 3052 129 2 41 chr17 75600978 75601513 -13903040 + L1PA16 LINE L1 5627 6140 -26 228 100 0 0 chr17 75601513 75601553 -13903000 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr17 75602403 75602425 -13902128 + AT_rich Low_complexity Low_complexity 1 22 0 370 317 77 18 chr17 75602440 75602661 -13901892 - L1ME4a LINE L1 -289 5832 5599 26 50 0 0 chr17 75602871 75602911 -13901642 + AT_rich Low_complexity Low_complexity 1 40 0 250 288 62 62 chr17 75603069 75603229 -13901324 - MLT1I LTR MaLR -165 244 85 1366 85 0 0 chr17 75604777 75604953 -13899600 + AluY SINE Alu 136 311 0 2540 59 0 0 chr17 75604960 75605267 -13899286 + AluY SINE Alu 2 308 -3 22 0 0 0 chr17 75606448 75606470 -13898083 + AT_rich Low_complexity Low_complexity 1 22 0 198 167 0 0 chr17 75606671 75606707 -13897846 + (TATATG)n Simple_repeat Simple_repeat 5 40 0 1538 155 103 66 chr17 75607073 75607453 -13897100 - MER57A LTR ERV1 0 403 10 437 160 0 112 chr17 75607458 75607583 -13896970 - MER57A-int LTR ERV1 -2 7535 7425 744 153 110 63 chr17 75607583 75607901 -13896652 - LTR54 LTR ERV1 -121 377 1 758 224 0 0 chr17 75607901 75608044 -13896509 - MER57A-int LTR ERV1 -393 7144 7002 478 315 69 31 chr17 75608183 75608472 -13896081 - HERVL LTR ERVL -3353 2301 2002 294 29 0 0 chr17 75608483 75608518 -13896035 + (CATTT)n Simple_repeat Simple_repeat 4 38 0 1696 173 7 0 chr17 75608518 75608795 -13895758 - AluJo SINE Alu -33 279 1 249 286 14 0 chr17 75609024 75609094 -13895459 + MIR SINE MIR 178 248 -14 249 316 0 13 chr17 75609116 75609192 -13895361 - MIR SINE MIR -174 88 14 2289 100 3 7 chr17 75609327 75609637 -13894916 - AluSg SINE Alu -1 309 1 237 241 35 0 chr17 75609799 75609857 -13894696 + L2 LINE L2 3254 3313 0 333 330 46 9 chr17 75610390 75610499 -13894054 + MIR SINE MIR 31 143 -65 460 177 135 28 chr17 75610553 75610694 -13893859 - MER58C DNA MER1_type -4 211 56 2032 102 25 7 chr17 75610846 75611130 -13893423 + AluSx SINE Alu 11 299 -13 2443 78 0 3 chr17 75611557 75611863 -13892690 - AluSq SINE Alu -3 310 6 2384 84 0 3 chr17 75612167 75612464 -13892089 - AluSx SINE Alu -16 296 1 312 248 248 8 chr17 75612726 75612843 -13891710 + MIR3 SINE MIR 3 147 -61 3159 108 20 2 chr17 75613016 75613471 -13891082 - MER1A DNA MER1_type 0 529 67 498 288 26 13 chr17 75613542 75613695 -13890858 - MIR SINE MIR -17 245 91 351 266 48 77 chr17 75614881 75614929 -13889624 - L1MC5 LINE L1 -262 7699 7651 2044 99 0 18 chr17 75614929 75615248 -13889305 + AluSg SINE Alu 3 316 0 351 266 48 77 chr17 75615248 75615405 -13889148 - L1MC5 LINE L1 -310 7651 7499 22 0 0 0 chr17 75617224 75617246 -13887307 + AT_rich Low_complexity Low_complexity 1 22 0 280 274 0 0 chr17 75618498 75618560 -13885993 + MER5A DNA MER1_type 128 189 0 239 203 16 0 chr17 75618660 75618724 -13885829 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 243 0 0 0 chr17 75618836 75618863 -13885690 + (A)n Simple_repeat Simple_repeat 1 27 0 1402 115 0 5 chr17 75618890 75619081 -13885472 + AluSq SINE Alu 2 191 -122 1580 191 3 28 chr17 75619805 75620124 -13884429 + AluJo SINE Alu 1 311 -1 1666 225 0 11 chr17 75620857 75621213 -13883340 - MLT1A1 LTR MaLR 0 365 14 243 347 21 62 chr17 75622182 75622326 -13882227 + MIR3 SINE MIR 23 160 -48 2015 125 37 72 chr17 75622494 75622871 -13881682 - THE1B LTR MaLR 0 364 1 490 324 44 66 chr17 75623907 75624179 -13880374 - L2 LINE L2 -89 3183 2918 2027 108 29 4 chr17 75624899 75625177 -13879376 + AluSq SINE Alu 16 300 -13 1931 117 0 48 chr17 75625627 75625943 -13878610 + AluSx SINE Alu 1 301 -11 559 155 19 0 chr17 75626779 75626882 -13877671 + L1MA4 LINE L1 6150 6254 -46 621 264 0 14 chr17 75626885 75627029 -13877524 + FLAM_A SINE Alu 1 142 0 284 115 0 0 chr17 75627029 75627081 -13877472 + L1MA4A LINE L1 6245 6296 -7 356 319 42 8 chr17 75627810 75627929 -13876624 + MIR SINE MIR 23 145 -117 24 0 0 0 chr17 75629114 75629138 -13875415 + AT_rich Low_complexity Low_complexity 1 24 0 2827 188 49 17 chr17 75631057 75632216 -13872337 - L1M2 LINE L1 -541 5771 4587 1487 166 57 0 chr17 75632213 75632544 -13872009 + L1 LINE L1 4294 4643 -1503 * 1132 219 53 61 chr17 75633517 75633912 -13870641 + MLT1B LTR MaLR 1 396 0 239 261 0 43 chr17 75633932 75634001 -13870552 - L2 LINE L2 0 3313 3248 356 278 86 37 chr17 75634978 75635140 -13869413 + L2 LINE L2 2583 2752 -562 2291 224 19 39 chr17 75635165 75635782 -13868771 + L1M4 LINE L1 8 612 -5930 26 30 0 0 chr17 75636254 75636287 -13868266 + AT_rich Low_complexity Low_complexity 1 33 0 405 227 0 0 chr17 75636287 75636384 -13868169 - L1MA6 LINE L1 -1 6299 6203 2140 115 52 27 chr17 75637740 75638106 -13866447 - THE1C LTR MaLR 0 375 1 482 350 24 20 chr17 75638313 75638552 -13866001 - MIR SINE MIR 0 262 26 260 298 0 48 chr17 75640621 75640705 -13863848 - L2 LINE L2 -7 3265 3186 413 213 0 106 chr17 75640804 75640945 -13863608 + MER20 DNA MER1_type 1 126 -93 300 191 0 117 chr17 75641108 75641202 -13863351 + MER20 DNA MER1_type 132 214 -5 629 215 110 30 chr17 75641493 75641693 -13862860 - MIR SINE MIR -14 248 33 443 253 114 13 chr17 75641774 75641932 -13862621 + MIR SINE MIR 79 252 -10 1472 210 54 46 chr17 75642355 75642746 -13861807 - MSTD LTR MaLR -2 394 1 360 0 0 0 chr17 75642832 75642872 -13861681 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr17 75643655 75643677 -13860876 + AT_rich Low_complexity Low_complexity 1 22 0 1421 89 0 30 chr17 75643700 75643903 -13860650 + MER107 DNA MER1_type 1 197 0 220 389 22 7 chr17 75644396 75644533 -13860020 + L2 LINE L2 220 358 -2956 886 223 16 0 chr17 75644533 75644717 -13859836 - MER5A DNA MER1_type -1 188 2 5970 126 15 18 chr17 75644729 75646115 -13858438 + L1PA14 LINE L1 4775 6161 0 2012 118 46 0 chr17 75646125 75646405 -13858148 + AluSc SINE Alu 1 293 -16 634 388 50 9 chr17 75646406 75646744 -13857809 + L2 LINE L2 358 709 -2605 3486 183 29 40 chr17 75646770 75647541 -13857012 + LTR1 LTR ERV1 24 785 0 186 326 145 25 chr17 75647545 75647787 -13856766 + L2 LINE L2 957 1227 -2087 500 351 50 16 chr17 75647894 75648136 -13856417 + MIR SINE MIR 13 262 0 21 57 0 0 chr17 75648739 75648774 -13855779 + AT_rich Low_complexity Low_complexity 1 35 0 2000 96 53 40 chr17 75649303 75649605 -13854948 - AluSc SINE Alu -3 306 1 282 323 21 0 chr17 75649827 75649923 -13854630 + MIR SINE MIR 155 252 -10 631 272 105 17 chr17 75650264 75650657 -13853896 - L1ME3A LINE L1 -2 6162 5725 304 306 183 12 chr17 75650719 75650971 -13853582 - L1MEc LINE L1 -4226 2170 1876 308 299 28 0 chr17 75651098 75651205 -13853348 - L1MEc LINE L1 -4704 1692 1583 1136 169 46 0 chr17 75652907 75653126 -13851427 - L1MA9 LINE L1 -240 6072 5844 310 312 32 49 chr17 75653164 75653411 -13851142 - HERV16 LTR ERVL -3817 1179 937 2249 113 0 0 chr17 75653458 75653750 -13850803 + AluSx SINE Alu 1 292 -20 2910 221 70 15 chr17 75654451 75655363 -13849190 - Charlie1 DNA MER1_type -166 2595 1634 2516 64 0 0 chr17 75655365 75655662 -13848891 + AluY SINE Alu 1 297 -14 41028 30 21 1 chr17 75656250 75662261 -13842292 + L1HS LINE L1 22 6155 0 297 0 0 0 chr17 75662261 75662294 -13842259 + (A)n Simple_repeat Simple_repeat 1 33 0 256 298 0 48 chr17 75713615 75713699 -13790854 - L2 LINE L2 -7 3265 3186 458 213 0 106 chr17 75713798 75713939 -13790614 + MER20 DNA MER1_type 1 126 -93 324 191 0 117 chr17 75714102 75714196 -13790357 + MER20 DNA MER1_type 132 214 -5 628 215 110 30 chr17 75714487 75714687 -13789866 - MIR SINE MIR -14 248 33 450 253 114 13 chr17 75714768 75714926 -13789627 + MIR SINE MIR 79 252 -10 1497 215 51 43 chr17 75715349 75715740 -13788813 - MSTD LTR MaLR -2 394 1 288 0 0 0 chr17 75715826 75715858 -13788695 + (TG)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr17 75716641 75716663 -13787890 + AT_rich Low_complexity Low_complexity 1 22 0 1422 89 0 30 chr17 75716686 75716889 -13787664 + MER107 DNA MER1_type 1 197 0 218 389 22 7 chr17 75717382 75717519 -13787034 + L2 LINE L2 220 358 -2956 876 223 16 0 chr17 75717519 75717703 -13786850 - MER5A DNA MER1_type -1 188 2 6296 127 15 15 chr17 75717715 75719100 -13785453 + L1PA14 LINE L1 4775 6161 0 2001 114 46 0 chr17 75719111 75719391 -13785162 + AluSc SINE Alu 1 293 -16 605 375 41 33 chr17 75719392 75719732 -13784821 + L2 LINE L2 358 703 -2611 3694 183 28 42 chr17 75719732 75720528 -13784025 + LTR1 LTR ERV1 1 785 0 605 375 41 33 chr17 75720528 75720579 -13783974 + L2 LINE L2 703 752 -2562 225 279 72 95 chr17 75720606 75720828 -13783725 + L2 LINE L2 1068 1284 -2030 479 355 50 16 chr17 75720881 75721123 -13783430 + MIR SINE MIR 13 262 0 21 57 0 0 chr17 75721726 75721761 -13782792 + AT_rich Low_complexity Low_complexity 1 35 0 1950 97 53 40 chr17 75722290 75722590 -13781963 - AluSc SINE Alu -5 304 1 286 323 21 0 chr17 75722812 75722908 -13781645 + MIR SINE MIR 155 252 -10 725 265 105 17 chr17 75723249 75723642 -13780911 - L1ME3A LINE L1 -2 6162 5725 295 299 85 31 chr17 75723966 75724190 -13780363 - L1MEc LINE L1 -4578 1818 1583 1206 159 53 4 chr17 75725892 75726123 -13778430 - L1MA9 LINE L1 -240 6072 5826 381 312 32 49 chr17 75726149 75726396 -13778157 - HERV16 LTR ERVL -3817 1179 937 2220 116 0 0 chr17 75726443 75726735 -13777818 + AluSx SINE Alu 1 292 -20 3171 221 70 15 chr17 75727436 75728348 -13776205 - Charlie1 DNA MER1_type -166 2595 1634 2509 64 0 0 chr17 75728350 75728647 -13775906 + AluY SINE Alu 1 297 -14 1509 116 0 0 chr17 75729900 75730107 -13774446 - AluSg/x SINE Alu 0 310 104 2064 105 10 27 chr17 75730383 75730678 -13773875 - AluSp SINE Alu -23 290 1 260 359 8 34 chr17 75731384 75731501 -13773052 + MIR SINE MIR 21 134 -128 369 319 7 37 chr17 75732108 75732243 -13772310 + L2 LINE L2 3142 3272 0 987 323 35 44 chr17 75733146 75733916 -13770637 + L2 LINE L2 2545 3306 -7 337 271 132 7 chr17 75735165 75735309 -13769244 - MIR SINE MIR -16 246 85 407 280 25 17 chr17 75735537 75735655 -13768898 - L2 LINE L2 -9 3304 3186 293 127 0 70 chr17 75736326 75736397 -13768156 - MLT2B1 LTR ERVL 0 520 455 1150 219 11 69 chr17 75736437 75736711 -13767842 - MLT2B1 LTR ERVL -54 466 209 2200 115 8 46 chr17 75736720 75737086 -13767467 - THE1C LTR MaLR -23 352 1 1105 154 6 0 chr17 75737086 75737265 -13767288 - MLT2B1 LTR ERVL -307 213 34 884 311 98 11 chr17 75737374 75737846 -13766707 + LTR33 LTR ERVL 5 517 -4 1248 150 71 18 chr17 75737959 75738185 -13766368 - AluSg/x SINE Alu -8 302 65 1877 191 45 100 chr17 75738202 75738996 -13765557 - LTR8A LTR ERV1 0 727 1 322 301 116 14 chr17 75739006 75739152 -13765401 - MIR SINE MIR -61 201 41 28 0 0 0 chr17 75739182 75739210 -13765343 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 75740156 75740177 -13764376 + AT_rich Low_complexity Low_complexity 1 21 0 204 214 0 0 chr17 75740578 75740620 -13763933 + CT-rich Low_complexity Low_complexity 1 42 0 27 49 0 0 chr17 75741186 75741227 -13763326 + AT_rich Low_complexity Low_complexity 1 41 0 3228 129 2 41 chr17 75741358 75741893 -13762660 + L1PA16 LINE L1 5627 6140 -26 228 100 0 0 chr17 75741893 75741933 -13762620 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr17 75742783 75742805 -13761748 + AT_rich Low_complexity Low_complexity 1 22 0 370 317 77 18 chr17 75742820 75743041 -13761512 - L1ME4a LINE L1 -289 5832 5599 26 50 0 0 chr17 75743251 75743291 -13761262 + AT_rich Low_complexity Low_complexity 1 40 0 300 288 62 62 chr17 75743449 75743609 -13760944 - MLT1I LTR MaLR -165 244 85 1363 85 0 0 chr17 75745157 75745333 -13759220 + AluY SINE Alu 136 311 0 2578 55 0 0 chr17 75745340 75745647 -13758906 + AluY SINE Alu 2 308 -3 22 0 0 0 chr17 75746828 75746850 -13757703 + AT_rich Low_complexity Low_complexity 1 22 0 198 167 0 0 chr17 75747051 75747087 -13757466 + (TATATG)n Simple_repeat Simple_repeat 5 40 0 1657 155 103 66 chr17 75747453 75747833 -13756720 - MER57A LTR ERV1 0 403 10 470 160 0 112 chr17 75747838 75747963 -13756590 - MER57A-int LTR ERV1 -2 7535 7425 830 153 110 63 chr17 75747963 75748281 -13756272 - LTR54 LTR ERV1 -121 377 1 805 224 0 0 chr17 75748281 75748424 -13756129 - MER57A-int LTR ERV1 -393 7144 7002 558 312 80 25 chr17 75748454 75748852 -13755701 - HERVL LTR ERVL -3284 2480 2002 294 29 0 0 chr17 75748863 75748898 -13755655 + (CATTT)n Simple_repeat Simple_repeat 4 38 0 1678 173 7 0 chr17 75748898 75749175 -13755378 - AluJo SINE Alu -33 279 1 375 287 83 52 chr17 75749608 75749838 -13754715 - HERVL LTR ERVL -3710 1286 1050 318 286 51 0 chr17 75749851 75749949 -13754604 + L1MC4 LINE L1 6601 6703 -1339 309 322 0 0 chr17 75749921 75750008 -13754545 - L1MC4 LINE L1 -1339 6703 6617 * 276 281 0 0 chr17 75750010 75750099 -13754454 + (TA)n Simple_repeat Simple_repeat 2 90 0 2204 98 3 0 chr17 75750100 75750386 -13754167 - AluSp SINE Alu -26 287 1 185 62 0 31 chr17 75751661 75751693 -13752860 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 247 315 105 0 chr17 75751753 75751915 -13752638 - L2 LINE L2 -115 3198 3020 26 64 0 0 chr17 75752546 75752593 -13751960 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 53 chr17 75752619 75752637 -13751916 + AT_rich Low_complexity Low_complexity 1 18 -18 1962 134 0 7 chr17 75752637 75752943 -13751610 + AluSx SINE Alu 1 304 0 23 0 0 53 chr17 75752943 75752961 -13751592 + AT_rich Low_complexity Low_complexity 18 36 0 864 171 9 91 chr17 75753762 75753898 -13750655 + L1M2 LINE L1 5547 5661 -639 2384 91 3 0 chr17 75753898 75754207 -13750346 + AluY SINE Alu 2 311 0 864 171 9 91 chr17 75754207 75754319 -13750234 + L1M2 LINE L1 5661 5781 -519 213 195 52 13 chr17 75754449 75754526 -13750027 + (TATAA)n Simple_repeat Simple_repeat 3 82 0 1826 193 29 2 chr17 75754653 75755062 -13749491 - Zaphod DNA AcHobo -11 4020 3601 40 67 0 0 chr17 75755113 75755188 -13749365 + AT_rich Low_complexity Low_complexity 1 75 0 1756 290 92 11 chr17 75755259 75756065 -13748488 - Zaphod DNA AcHobo -3159 872 2 29 0 0 0 chr17 75756689 75756718 -13747835 + AT_rich Low_complexity Low_complexity 1 29 0 2036 145 0 0 chr17 75756880 75757176 -13747377 - AluSx SINE Alu -14 298 3 2593 72 3 61 chr17 75757245 75757493 -13747060 + THE1A LTR MaLR 1 221 -134 1883 103 0 31 chr17 75757493 75757783 -13746770 + AluSq SINE Alu 22 302 -11 2593 72 3 61 chr17 75757783 75757911 -13746642 + THE1A LTR MaLR 221 355 0 427 271 36 91 chr17 75758798 75759127 -13745426 - L1MEd LINE L1 -4925 1194 884 2424 67 0 7 chr17 75759617 75759915 -13744638 - AluSq SINE Alu -16 297 2 1605 190 74 6 chr17 75759962 75760326 -13744227 - MLT1B LTR MaLR 0 390 2 325 275 42 96 chr17 75760913 75761080 -13743473 - L3 LINE CR1 -228 1349 1192 22 0 0 0 chr17 75762017 75762039 -13742514 + AT_rich Low_complexity Low_complexity 1 22 0 585 244 97 38 chr17 75762138 75762457 -13742096 + Charlie2 DNA MER1_type 2507 2844 -18 186 182 0 0 chr17 75764695 75764728 -13739825 + L2 LINE L2 3193 3225 -47 505 223 71 47 chr17 75764826 75765037 -13739516 - L1MC5 LINE L1 -475 7486 7271 1253 269 16 30 chr17 75765186 75765621 -13738932 - L1ME LINE L1 -426 5744 5316 2002 152 33 28 chr17 75766675 75767037 -13737516 - THE1B LTR MaLR 0 364 1 950 136 7 0 chr17 75767440 75767580 -13736973 + THE1C LTR MaLR 1 141 -234 2116 108 59 3 chr17 75767580 75767903 -13736650 + THE1C-int LTR MaLR 1236 1576 -4 2155 120 61 17 chr17 75767907 75768266 -13736287 + THE1C LTR MaLR 1 375 0 450 36 0 0 chr17 75768483 75768539 -13736014 + (CA)n Simple_repeat Simple_repeat 1 56 0 317 338 84 39 chr17 75768575 75769039 -13735514 - L2 LINE L2 -1558 1756 1272 208 116 0 47 chr17 75770596 75770639 -13733914 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 180 0 0 0 chr17 75771491 75771511 -13733042 + (A)n Simple_repeat Simple_repeat 1 20 0 498 178 33 0 chr17 75771634 75771724 -13732829 - MER5A DNA MER1_type -83 106 14 250 224 397 9 chr17 75772093 75772209 -13732344 - MIR SINE MIR 0 262 102 230 291 32 73 chr17 75772834 75773054 -13731499 - L1ME3A LINE L1 -233 5937 5727 686 283 6 0 chr17 75773154 75773320 -13731233 + MER5B DNA MER1_type 1 167 -11 451 61 15 0 chr17 75775814 75775880 -13728673 + MADE1 DNA Mariner 14 80 0 516 32 0 0 chr17 75776113 75776175 -13728378 + (CA)n Simple_repeat Simple_repeat 2 63 0 240 301 0 14 chr17 75776487 75776560 -13727993 + T-rich Low_complexity Low_complexity 4 75 0 872 266 22 22 chr17 75776602 75776824 -13727729 - MIR SINE MIR -25 237 16 2546 69 0 17 chr17 75779755 75780102 -13724451 - L1PA8 LINE L1 0 6172 5832 329 231 130 9 chr17 75780367 75780475 -13724078 + LTR67 LTR ERVL 434 554 -3 4315 65 0 0 chr17 75780797 75781348 -13723205 - L1PA7 LINE L1 -7 6147 5597 618 293 43 47 chr17 75781380 75781576 -13722977 - MIR SINE MIR -30 232 36 2255 106 3 0 chr17 75781576 75781879 -13722674 - AluSq SINE Alu -9 304 1 618 293 43 47 chr17 75781879 75781914 -13722639 - MIR SINE MIR -226 36 2 271 231 98 38 chr17 75784181 75784286 -13720267 + MIR SINE MIR 7 124 -84 505 242 62 8 chr17 75784307 75784435 -13720118 + MIR SINE MIR 80 214 -48 343 215 15 0 chr17 75784599 75784664 -13719889 - L2 LINE L2 -244 3069 3004 308 320 55 8 chr17 75784670 75784798 -13719755 + L1ME LINE L1 5383 5516 -658 2262 116 111 7 chr17 75784834 75784917 -13719636 + L1PB2 LINE L1 5702 5775 -376 2593 62 0 0 chr17 75784917 75785221 -13719332 + AluSg SINE Alu 1 304 -6 2262 116 111 7 chr17 75785221 75785543 -13719010 + L1PB2 LINE L1 5775 6149 -2 225 226 160 38 chr17 75785711 75785817 -13718736 + L1ME LINE L1 5681 5799 -322 231 254 51 0 chr17 75786318 75786377 -13718176 - L2 LINE L2 -8 3264 3203 499 194 24 32 chr17 75786697 75786821 -13717732 - MIR SINE MIR -59 203 81 300 348 37 27 chr17 75788204 75788391 -13716162 - ERVL LTR ERVL -948 4816 4628 589 168 113 65 chr17 75788397 75788582 -13715971 - ORSL DNA AcHobo 0 275 82 303 380 14 0 chr17 75788733 75788875 -13715678 - ERVL LTR ERVL -1201 4563 4420 307 344 10 0 chr17 75788941 75789037 -13715516 - ERVL LTR ERVL -1492 4272 4176 435 349 19 15 chr17 75789164 75789425 -13715128 - ERVL LTR ERVL -1754 4010 3749 266 333 43 7 chr17 75789621 75789762 -13714791 - ERVL LTR ERVL -2330 3434 3289 688 252 32 0 chr17 75789790 75789945 -13714608 - MER63A DNA MER1_type -24 186 27 1081 237 103 46 chr17 75790110 75790498 -13714055 - LTR16C LTR ERVL -3 488 79 213 175 0 0 chr17 75791213 75791253 -13713300 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr17 75791252 75791279 -13713274 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 695 222 88 0 chr17 75792366 75792582 -13711971 - L1MA4 LINE L1 -6 6294 6060 290 273 0 23 chr17 75793292 75793380 -13711173 - MER94 DNA DNA -40 94 9 234 0 0 0 chr17 75793635 75793661 -13710892 + (CA)n Simple_repeat Simple_repeat 2 27 0 348 256 288 21 chr17 75794576 75794767 -13709786 + MIR SINE MIR 21 262 0 510 256 92 41 chr17 75795645 75795840 -13708713 - MIR SINE MIR 0 262 58 301 261 35 0 chr17 75796144 75796259 -13708294 - HAL1b LINE L1 -242 1106 988 276 241 152 0 chr17 75796310 75796468 -13708085 - HAL1b LINE L1 -547 801 620 1049 127 18 0 chr17 75796773 75796938 -13707615 + L1PA13 LINE L1 5575 5742 -419 597 102 10 20 chr17 75796954 75797052 -13707501 + L1PA13 LINE L1 6061 6157 -6 1407 226 0 9 chr17 75797061 75797384 -13707169 + L1M4 LINE L1 3716 4035 -2111 2119 128 0 13 chr17 75797634 75797939 -13706614 - AluSx SINE Alu -11 301 1 263 333 12 32 chr17 75797939 75798185 -13706368 + L1MEc LINE L1 655 895 -5501 248 257 150 18 chr17 75798187 75798300 -13706253 + MIR SINE MIR 70 197 -65 330 257 93 21 chr17 75798497 75798637 -13705916 + MIR SINE MIR 76 225 -37 1068 325 56 3 chr17 75798809 75799166 -13705387 + L3 LINE CR1 1180 1555 -22 241 330 57 19 chr17 75799992 75800098 -13704455 - L2 LINE L2 0 3272 3163 22 0 0 0 chr17 75800146 75800168 -13704385 + AT_rich Low_complexity Low_complexity 1 22 0 2164 131 0 0 chr17 75800222 75800513 -13704040 - AluSg SINE Alu -19 291 1 2365 103 0 0 chr17 75801121 75801431 -13703122 - AluSx SINE Alu -2 310 1 315 286 13 0 chr17 75801449 75801526 -13703027 + MER5B DNA MER1_type 1 78 -100 473 269 46 0 chr17 75801527 75801657 -13702896 + MER58B DNA MER1_type 206 341 0 1133 167 44 19 chr17 75801938 75802208 -13702345 + L1MA7 LINE L1 6015 6291 0 1695 174 68 84 chr17 75802546 75803059 -13701494 - MLT1D LTR MaLR 0 505 1 231 211 179 135 chr17 75803105 75803261 -13701292 + LTR67 LTR ERVL 34 196 -361 356 217 132 9 chr17 75803533 75803639 -13700914 + LTR67 LTR ERVL 434 552 -5 7197 46 0 0 chr17 75803977 75805072 -13699481 - L1PA7 LINE L1 -13 6141 5050 613 203 135 0 chr17 75806724 75806872 -13697681 - MER58B DNA MER1_type -2 339 172 262 250 0 16 chr17 75807703 75807767 -13696786 + MER5A DNA MER1_type 10 72 -117 360 241 37 0 chr17 75807876 75807984 -13696569 + (TGAA)n Simple_repeat Simple_repeat 4 115 0 562 290 75 58 chr17 75809935 75810753 -13693800 + L1MC4a LINE L1 4531 5377 -769 3435 151 78 18 chr17 75810861 75811460 -13693093 + L1MC1 LINE L1 5616 6259 -74 2105 143 27 3 chr17 75811460 75811789 -13692764 + MER1B DNA MER1_type 1 337 0 3435 151 78 18 chr17 75811789 75811845 -13692708 + L1MC1 LINE L1 6259 6310 -23 * 5221 248 82 34 chr17 75811841 75813839 -13690714 + L1MC4a LINE L1 5491 7585 -223 495 227 25 18 chr17 75813832 75813995 -13690558 + L1MD3 LINE L1 7822 7985 -10 * 198 71 0 0 chr17 75814156 75814184 -13690369 + (TG)n Simple_repeat Simple_repeat 1 28 0 2078 129 3 0 chr17 75814938 75815233 -13689320 - AluSq SINE Alu -17 296 1 532 318 71 63 chr17 75815650 75816031 -13688522 + L2 LINE L2 2849 3232 -81 292 269 65 11 chr17 75816091 75816184 -13688369 - MIR SINE MIR -121 141 44 383 164 0 0 chr17 75816420 75816475 -13688078 - MER81 DNA DNA -3 111 57 1411 209 30 54 chr17 75816503 75816773 -13687780 - MLT1A1 LTR MaLR -1 364 104 2112 113 95 15 chr17 75816773 75817110 -13687443 - THE1B LTR MaLR 0 364 1 1411 209 30 54 chr17 75817110 75817212 -13687341 - MLT1A1 LTR MaLR -261 104 1 31 0 0 0 chr17 75817894 75817925 -13686628 + AT_rich Low_complexity Low_complexity 1 31 0 251 276 82 10 chr17 75818168 75818266 -13686287 - MIR SINE MIR -64 198 94 284 123 12 49 chr17 75818352 75818433 -13686120 + (GGGGA)n Simple_repeat Simple_repeat 3 80 0 22 35 0 0 chr17 75818509 75818538 -13686015 + AT_rich Low_complexity Low_complexity 1 29 0 2186 99 7 0 chr17 75819355 75819649 -13684904 - AluSx SINE Alu -16 296 1 23 0 0 0 chr17 75819712 75819735 -13684818 + AT_rich Low_complexity Low_complexity 1 23 0 188 33 0 33 chr17 75819742 75819772 -13684781 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 5022 156 19 3 chr17 75820063 75820920 -13683633 + L1MC1 LINE L1 5463 6332 -1 2201 102 3 7 chr17 75820997 75821302 -13683251 - AluSx SINE Alu -8 304 1 25 31 0 0 chr17 75821472 75821504 -13683049 + AT_rich Low_complexity Low_complexity 1 32 0 225 288 0 17 chr17 75822539 75822598 -13681955 - MLT2E LTR ERVL -538 90 33 624 141 28 34 chr17 75822837 75823014 -13681539 + GA-rich Low_complexity Low_complexity 3 178 0 813 288 70 14 chr17 75823052 75823465 -13681088 - L1M4 LINE L1 -4892 1963 1528 234 105 0 0 chr17 75823471 75823509 -13681044 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 5510 101 10 5 chr17 75823509 75824301 -13680252 - L1PA10 LINE L1 -21 6147 5352 1481 143 8 0 chr17 75824298 75824543 -13680010 + L1P LINE L1 4330 4576 -1570 * 314 162 103 130 chr17 75824535 75824720 -13679833 - L1M4 LINE L1 -5332 1527 1348 * 2437 204 8 50 chr17 75825355 75825890 -13678663 - MLT2B2 LTR ERVL -3 512 1 189 171 0 0 chr17 75825890 75825925 -13678628 + (TATG)n Simple_repeat Simple_repeat 3 37 0 3778 142 25 8 chr17 75825925 75826406 -13678147 - Tigger3(Golem) DNA MER2_type 0 3028 2532 2301 112 22 27 chr17 75826406 75826772 -13677781 - THE1B LTR MaLR 0 364 1 3778 142 25 8 chr17 75826772 75826918 -13677635 - Tigger3(Golem) DNA MER2_type -496 2532 2390 43217 29 21 1 chr17 75826921 75832952 -13671601 + L1HS LINE L1 1 6155 0 195 42 0 0 chr17 75832956 75832980 -13671573 + (A)n Simple_repeat Simple_repeat 1 24 0 282 339 81 59 chr17 75833069 75833391 -13671162 + MLT1L LTR MaLR 155 483 -132 22 0 0 0 chr17 75833465 75833487 -13671066 + AT_rich Low_complexity Low_complexity 1 22 0 194 257 27 40 chr17 75834919 75834993 -13669560 + MIR3 SINE MIR 100 172 -36 267 305 19 67 chr17 75835014 75835119 -13669434 + MIR SINE MIR 47 146 -62 3999 90 5 5 chr17 75835199 75835753 -13668800 - MER41A LTR ERV1 0 554 1 1770 166 0 7 chr17 75835788 75836095 -13668458 + AluSx SINE Alu 1 305 0 295 245 85 28 chr17 75836439 75836545 -13668008 + MER94 DNA DNA 8 119 -15 257 194 75 0 chr17 75836571 75836638 -13667915 - MLT1J LTR MaLR -1 510 439 373 208 28 0 chr17 75836810 75836882 -13667671 - MLT1J LTR MaLR -319 192 119 23 33 0 0 chr17 75836930 75836960 -13667593 + AT_rich Low_complexity Low_complexity 1 30 0 1321 124 10 34 chr17 75837015 75837224 -13667329 + AluSg/x SINE Alu 99 302 -10 333 0 0 0 chr17 75837483 75837520 -13667033 + (CA)n Simple_repeat Simple_repeat 2 38 0 523 186 10 0 chr17 75837522 75837624 -13666929 - L1M2 LINE L1 -507 5793 5691 * 2647 256 61 59 chr17 75837619 75837790 -13666763 - L1M2c LINE L1 -4802 1987 1818 2232 125 0 0 chr17 75837790 75838093 -13666460 - AluSx SINE Alu -9 303 1 2647 256 61 59 chr17 75838093 75838854 -13665699 - L1M2c LINE L1 -4971 1818 1053 870 261 16 27 chr17 75838921 75839178 -13665375 + L1ME3A LINE L1 5714 5967 -203 234 337 28 55 chr17 75839260 75839441 -13665112 + L2 LINE L2 2669 2844 -470 26 50 0 0 chr17 75840199 75840239 -13664314 + AT_rich Low_complexity Low_complexity 1 40 0 232 255 0 0 chr17 75840520 75840567 -13663986 + MIR3 SINE MIR 117 163 -45 1494 238 51 36 chr17 75840827 75841297 -13663256 - L1ME2 LINE L1 -89 6075 5599 26 30 0 0 chr17 75841297 75841330 -13663223 + AT_rich Low_complexity Low_complexity 1 33 0 2091 121 3 16 chr17 75841715 75842021 -13662532 - AluSx SINE Alu -10 302 1 718 266 6 0 chr17 75842097 75842274 -13662279 + MER5B DNA MER1_type 1 178 0 1909 147 30 12 chr17 75843475 75843808 -13660745 - MER44D DNA MER2_type 0 609 1 24 0 0 0 chr17 75845418 75845442 -13659111 + AT_rich Low_complexity Low_complexity 1 24 0 271 308 0 0 chr17 75845930 75845995 -13658558 + MLT1J2 LTR MaLR 69 133 -317 456 267 34 34 chr17 75846111 75846257 -13658296 + MLT1J LTR MaLR 333 478 -33 2397 35 0 0 chr17 75846893 75847181 -13657372 - L1PA4 LINE L1 -3 6152 5865 1929 98 0 4 chr17 75847229 75847483 -13657070 - AluSq SINE Alu -14 299 47 183 295 13 26 chr17 75847499 75847577 -13656976 + L3 LINE CR1 818 894 -683 352 104 30 0 chr17 75847577 75847644 -13656909 + L1PA16 LINE L1 6098 6166 0 272 344 89 6 chr17 75847846 75848003 -13656550 + L3 LINE CR1 1027 1196 -381 358 260 62 51 chr17 75848970 75849147 -13655406 - MARNA DNA Mariner -280 306 128 225 365 0 0 chr17 75849293 75849378 -13655175 + MIR3 SINE MIR 81 165 -43 2298 107 0 0 chr17 75849378 75849686 -13654867 + AluSx SINE Alu 1 308 -4 2027 153 0 0 chr17 75850789 75851089 -13653464 - AluSx SINE Alu -12 300 1 21 0 0 0 chr17 75852597 75852618 -13651935 + AT_rich Low_complexity Low_complexity 1 21 0 597 28 0 0 chr17 75854407 75854478 -13650075 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 484 253 99 43 chr17 75855373 75855535 -13649018 - MLT1E1 LTR MaLR -483 171 1 186 43 0 0 chr17 75855558 75855581 -13648972 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 1021 272 113 47 chr17 75855637 75856342 -13648211 - HAL1b LINE L1 -504 844 93 24 32 0 0 chr17 75856438 75856469 -13648084 + AT_rich Low_complexity Low_complexity 1 31 0 2532 91 8 3 chr17 75857156 75857509 -13647044 + THE1A LTR MaLR 1 355 0 23 0 0 0 chr17 75857558 75857581 -13646972 + AT_rich Low_complexity Low_complexity 1 23 0 4988 117 31 7 chr17 75857807 75858568 -13645985 + LTR17 LTR ERV1 1 780 0 259 257 188 10 chr17 75858780 75858881 -13645672 + L2 LINE L2 3195 3313 0 33 25 0 0 chr17 75859408 75859448 -13645105 + AT_rich Low_complexity Low_complexity 1 40 0 210 295 213 33 chr17 75859654 75859776 -13644777 + MIR3 SINE MIR 4 147 -61 315 381 88 30 chr17 75859899 75860222 -13644331 + L2 LINE L2 2687 3024 -248 2466 102 31 11 chr17 75860650 75861004 -13643549 + THE1B LTR MaLR 4 364 0 2428 140 41 14 chr17 75861038 75861451 -13643102 + MSTA LTR MaLR 1 424 -4 456 339 56 25 chr17 75863433 75863719 -13640834 + LTR33 LTR ERVL 1 295 -226 1226 54 0 0 chr17 75864594 75864741 -13639812 + AluY SINE Alu 163 309 -2 5452 156 91 1 chr17 75864896 75865832 -13638721 - LTR28 LTR ERV1 0 1020 1 21 0 0 0 chr17 75866214 75866235 -13638318 + AT_rich Low_complexity Low_complexity 1 21 0 957 270 165 41 chr17 75866670 75867137 -13637416 - MLT1F LTR MaLR -15 527 3 402 190 1 0 chr17 75867885 75867965 -13636588 - L1MA3 LINE L1 -26 6274 6199 226 325 102 45 chr17 75868534 75868799 -13635754 + L2 LINE L2 2690 2969 -345 1183 163 0 0 chr17 75868886 75869058 -13635495 - AluSx SINE Alu -138 174 3 341 138 0 0 chr17 75869320 75869378 -13635175 - L1PA16 LINE L1 -9 6157 6100 1402 194 64 0 chr17 75869379 75869709 -13634844 + L1 LINE L1 4120 4470 -1676 480 162 8 86 chr17 75869709 75869826 -13634727 - LTR40c LTR ERVL -265 200 93 27 29 0 0 chr17 75869966 75870000 -13634553 + AT_rich Low_complexity Low_complexity 1 34 0 965 170 82 26 chr17 75870150 75870344 -13634209 + MER2 DNA MER2_type 3 207 -138 223 96 39 19 chr17 75870347 75870399 -13634154 + T-rich Low_complexity Low_complexity 2 54 0 1509 87 5 5 chr17 75870402 75870610 -13633943 - AluSg/x SINE Alu -4 306 99 305 230 68 0 chr17 75870639 75870713 -13633840 + MER2 DNA MER2_type 267 345 0 2351 40 4 0 chr17 75870924 75871234 -13633319 - AluY SINE Alu 0 316 6 21 0 0 0 chr17 75871238 75871259 -13633294 + AT_rich Low_complexity Low_complexity 1 21 0 2128 108 0 25 chr17 75871409 75871724 -13632829 - AluSc SINE Alu -2 307 1 600 261 123 28 chr17 75871785 75871996 -13632557 + MIR SINE MIR 32 262 0 2045 131 7 23 chr17 75872025 75872330 -13632223 - AluSq SINE Alu -11 302 3 21 0 0 0 chr17 75872791 75872812 -13631741 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr17 75872866 75872901 -13631652 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 75873106 75873134 -13631419 + AT_rich Low_complexity Low_complexity 1 28 0 1797 242 120 12 chr17 75873648 75874379 -13630174 - L1ME3 LINE L1 -22 6140 5331 297 292 143 45 chr17 75874516 75875005 -13629548 - L1ME3 LINE L1 -924 5222 4686 296 348 12 6 chr17 75875024 75875185 -13629368 - L1ME3 LINE L1 -2017 4129 3968 2272 96 17 0 chr17 75875446 75875739 -13628814 + AluSg SINE Alu 1 298 -12 237 293 104 19 chr17 75876342 75876612 -13627941 + L1ME LINE L1 797 1089 -4981 364 271 34 42 chr17 75877359 75877477 -13627076 + MIR SINE MIR 46 162 -100 929 241 13 27 chr17 75877644 75877868 -13626685 + MER58A DNA MER1_type 2 222 -2 1183 77 61 7 chr17 75879766 75879956 -13624597 + L1MA1 LINE L1 6099 6290 -10 213 153 42 0 chr17 75879992 75880064 -13624489 + (TA)n Simple_repeat Simple_repeat 2 76 0 23 0 0 0 chr17 75880078 75880101 -13624452 + AT_rich Low_complexity Low_complexity 1 23 0 3543 134 4 6 chr17 75880341 75880869 -13623684 - MER1A DNA MER1_type 0 527 1 2604 40 0 7 chr17 75881842 75882145 -13622408 - AluY SINE Alu -10 301 1 1603 134 57 64 chr17 75883331 75883629 -13620924 + AluJb SINE Alu 1 296 -16 563 285 65 90 chr17 75884383 75884905 -13619648 - L2 LINE L2 0 3313 2805 1243 112 0 0 chr17 75884925 75885112 -13619441 - L1PA13 LINE L1 -1 6162 5976 306 252 107 0 chr17 75887508 75887639 -13616914 - L1ME3 LINE L1 -2153 3993 3849 230 259 0 116 chr17 75887925 75888037 -13616516 - MER103 DNA DNA -2 164 66 27 0 0 0 chr17 75888224 75888251 -13616302 + AT_rich Low_complexity Low_complexity 1 27 0 200 310 202 31 chr17 75889147 75889276 -13615277 - MIR3 SINE MIR -54 154 4 496 311 71 14 chr17 75890645 75890857 -13613696 - MIR SINE MIR 0 262 39 685 173 0 8 chr17 75891286 75891413 -13613140 - L1PB3 LINE L1 -3 6151 6026 305 173 0 0 chr17 75891598 75891650 -13612903 + L1MC4 LINE L1 6652 6703 -1339 295 206 0 19 chr17 75891655 75891762 -13612791 + (TA)n Simple_repeat Simple_repeat 2 106 0 185 146 21 0 chr17 75891858 75891906 -13612647 + (TA)n Simple_repeat Simple_repeat 1 49 0 1738 161 0 17 chr17 75892355 75892647 -13611906 + AluJb SINE Alu 1 287 -25 471 100 0 0 chr17 75892653 75892723 -13611830 + (TG)n Simple_repeat Simple_repeat 1 70 0 237 397 15 7 chr17 75893130 75893266 -13611287 + MIR SINE MIR 8 144 -118 302 154 0 15 chr17 75894316 75894338 -13610215 + (TA)n Simple_repeat Simple_repeat 1 22 -42 6949 126 42 7 chr17 75894338 75895525 -13609028 + Tigger3b DNA MER2_type 3 1231 0 302 154 0 15 chr17 75895525 75895567 -13608986 + (TA)n Simple_repeat Simple_repeat 22 64 0 4213 100 2 0 chr17 75895590 75896189 -13608364 - L1PA13 LINE L1 0 6163 5564 207 304 43 0 chr17 75898548 75898617 -13605936 + MIR SINE MIR 154 225 -37 2393 39 0 26 chr17 75899886 75900193 -13604360 + AluY SINE Alu 1 299 -12 3425 109 45 0 chr17 75900202 75900741 -13603812 - L1PA13 LINE L1 -2 6161 5599 21 0 0 0 chr17 75900819 75900840 -13603713 + AT_rich Low_complexity Low_complexity 1 21 0 2303 80 3 0 chr17 75901309 75901598 -13602955 - AluY SINE Alu -15 296 7 21 0 0 0 chr17 75902666 75902687 -13601866 + AT_rich Low_complexity Low_complexity 1 21 0 633 272 41 12 chr17 75903022 75903191 -13601362 + MER91A DNA MER1_type 6 179 -17 3755 239 41 23 chr17 75903347 75904347 -13600206 - MER45B DNA AcHobo -22 1018 1 1621 179 21 11 chr17 75907718 75907997 -13596556 - AluJb SINE Alu -30 282 1 2497 24 41 0 chr17 75909110 75909402 -13595151 - AluY SINE Alu -7 304 1 561 55 0 0 chr17 75910140 75910213 -13594340 + (CA)n Simple_repeat Simple_repeat 2 74 0 216 292 67 11 chr17 75910277 75910366 -13594187 + MIR SINE MIR 47 140 -122 190 133 22 22 chr17 75910614 75910659 -13593894 + (TA)n Simple_repeat Simple_repeat 1 45 0 21 36 0 0 chr17 75910786 75910814 -13593739 + AT_rich Low_complexity Low_complexity 1 28 0 209 309 71 12 chr17 75910961 75911045 -13593508 - L2 LINE L2 -20 3252 3164 258 265 15 15 chr17 75911325 75911393 -13593160 - L2 LINE L2 -37 3235 3168 1425 244 18 69 chr17 75911900 75912404 -13592149 + MLT1D LTR MaLR 28 505 0 208 365 79 11 chr17 75912424 75912613 -13591940 - L2 LINE L2 -499 2815 2614 300 228 144 24 chr17 75913263 75913430 -13591123 - L1M4 LINE L1 -743 5403 5217 21 26 0 26 chr17 75913587 75913603 -13590950 + AT_rich Low_complexity Low_complexity 1 16 -22 2030 130 3 0 chr17 75913603 75913888 -13590665 - AluSp SINE Alu -27 286 1 21 26 0 26 chr17 75913888 75913910 -13590643 + AT_rich Low_complexity Low_complexity 16 38 0 2861 253 37 28 chr17 75913919 75914882 -13589671 - L1ME1 LINE L1 -5 6286 5299 1015 161 6 0 chr17 75915039 75915200 -13589353 + FRAM SINE Alu 1 161 -15 286 276 102 24 chr17 75915932 75916059 -13588494 + L2 LINE L2 3175 3311 -2 1201 203 17 56 chr17 75916746 75917105 -13587448 + L1MD3 LINE L1 7650 7994 -1 22 0 0 0 chr17 75917149 75917171 -13587382 + AT_rich Low_complexity Low_complexity 1 22 0 290 128 75 0 chr17 75919346 75919440 -13585113 + (TA)n Simple_repeat Simple_repeat 2 102 0 284 244 104 44 chr17 75922128 75922263 -13582290 - MIR SINE MIR -8 254 112 25 0 0 0 chr17 75922992 75923017 -13581536 + AT_rich Low_complexity Low_complexity 1 25 0 230 311 0 0 chr17 75924098 75924159 -13580394 + L1MC/D LINE L1 5535 5595 -2213 23 0 0 0 chr17 75924268 75924291 -13580262 + AT_rich Low_complexity Low_complexity 1 23 0 339 65 0 0 chr17 75925569 75925615 -13578938 + (CA)n Simple_repeat Simple_repeat 1 46 0 304 323 100 68 chr17 75925817 75926068 -13578485 + MIR SINE MIR 4 262 0 685 227 96 106 chr17 75927350 75927848 -13576705 - MER34B LTR ERV1 -66 499 7 357 125 0 0 chr17 75927876 75927932 -13576621 + (T)n Simple_repeat Simple_repeat 1 56 0 235 274 20 69 chr17 75928124 75928226 -13576327 - L1ME4a LINE L1 -80 6041 5945 63 57 0 0 chr17 75928928 75929033 -13575520 + AT_rich Low_complexity Low_complexity 1 105 0 22 56 0 0 chr17 75930171 75930207 -13574346 + AT_rich Low_complexity Low_complexity 1 36 0 1831 163 0 13 chr17 75930435 75930748 -13573805 - AluJb SINE Alu -3 309 1 26 0 0 0 chr17 75930891 75930917 -13573636 + AT_rich Low_complexity Low_complexity 1 26 0 469 278 80 6 chr17 75930943 75931119 -13573434 - MIR SINE MIR -1 261 73 5541 120 5 0 chr17 75931317 75932135 -13572418 - L1PA14 LINE L1 -2 6159 5338 261 323 99 50 chr17 75932350 75932408 -13572145 + L1MEc LINE L1 110 164 -6232 2202 108 3 0 chr17 75932408 75932705 -13571848 - AluSx SINE Alu -14 298 1 261 323 99 50 chr17 75932705 75932949 -13571604 + L1MEc LINE L1 164 427 -5969 428 261 103 54 chr17 75933273 75933702 -13570851 + L1MEc LINE L1 701 1150 -5055 1013 110 43 24 chr17 75933736 75933945 -13570608 + L1MA7 LINE L1 6079 6291 0 811 296 52 33 chr17 75933960 75934265 -13570288 + L1MEc LINE L1 1168 1491 -4905 189 0 0 0 chr17 75934265 75934286 -13570267 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 811 296 52 33 chr17 75934286 75934557 -13569996 + L1MEc LINE L1 1491 1755 -4641 600 250 61 7 chr17 75934613 75934761 -13569792 + MER58A DNA MER1_type 7 162 0 222 37 0 0 chr17 75935535 75935562 -13568991 + (A)n Simple_repeat Simple_repeat 1 27 0 306 0 0 0 chr17 75935706 75935740 -13568813 + (TG)n Simple_repeat Simple_repeat 2 35 0 1091 222 0 0 chr17 75936272 75936479 -13568074 - MER58A DNA MER1_type 0 224 18 216 270 63 16 chr17 75936773 75936836 -13567717 - MIR SINE MIR -140 122 57 2185 94 10 7 chr17 75937207 75937506 -13567047 - AluY SINE Alu -11 300 1 2248 99 0 31 chr17 75938074 75938397 -13566156 + AluSq SINE Alu 1 313 0 212 0 36 0 chr17 75939995 75940023 -13564530 + (TA)n Simple_repeat Simple_repeat 1 29 0 1805 177 0 0 chr17 75940155 75940455 -13564098 - AluJb SINE Alu -12 300 1 851 259 137 65 chr17 75940528 75940960 -13563593 - LTR16B LTR ERVL -1 463 1 22 0 0 0 chr17 75942902 75942924 -13561629 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 75943312 75943335 -13561218 + AT_rich Low_complexity Low_complexity 1 23 0 2291 114 0 0 chr17 75944545 75944851 -13559702 + AluSx SINE Alu 1 306 -6 25 31 0 0 chr17 75945636 75945668 -13558885 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr17 75946154 75946175 -13558378 + AT_rich Low_complexity Low_complexity 1 21 0 402 296 15 30 chr17 75946354 75946489 -13558064 - MLT1J LTR MaLR -238 273 141 5280 114 0 1 chr17 75946489 75947244 -13557309 + L1PA13 LINE L1 5367 6120 -43 839 256 36 52 chr17 75947522 75947831 -13556722 - L1ME LINE L1 -5762 308 5 304 353 42 0 chr17 75947835 75947954 -13556599 + L2 LINE L2 2960 3083 -230 194 280 0 0 chr17 75948316 75948366 -13556187 + L2 LINE L2 3104 3153 -160 420 223 77 46 chr17 75948442 75948572 -13555981 + L2 LINE L2 3180 3313 0 3501 117 53 28 chr17 75948975 75949574 -13554979 + LTR18B LTR ERVL 1 614 0 387 273 35 47 chr17 75949587 75949759 -13554794 + HERVL18 LTR ERVL 128 297 -5750 * 727 229 17 39 chr17 75949753 75949932 -13554621 + HERVL18 LTR ERVL 492 666 -5381 264 191 0 0 chr17 75949927 75949974 -13554579 + HERVL18 LTR ERVL 917 963 -5084 * 1125 168 20 5 chr17 75949959 75950318 -13554235 + HERVL18 LTR ERVL 1383 1810 -4237 664 133 18 4 chr17 75950380 75950542 -13554011 + HERVL18 LTR ERVL 2231 2452 -3595 * 4457 150 8 76 chr17 75950541 75951369 -13553184 + HERVL18 LTR ERVL 2720 3491 -2556 3689 92 53 43 chr17 75951530 75952136 -13552417 + LTR18B LTR ERVL 1 612 -2 1718 193 78 18 chr17 75952183 75952582 -13551971 + MLT1D LTR MaLR 72 494 -11 312 288 38 0 chr17 75953122 75953202 -13551351 - HAL1 LINE L1 -2412 95 13 903 158 105 18 chr17 75957153 75957324 -13547229 - AluJb SINE Alu 0 312 127 21 0 0 0 chr17 75958003 75958024 -13546529 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 75958104 75958125 -13546428 + AT_rich Low_complexity Low_complexity 1 21 0 841 250 0 40 chr17 75959933 75960161 -13544392 + MER20 DNA MER1_type 1 219 0 187 289 0 0 chr17 75960190 75960235 -13544318 + L2 LINE L2 3223 3267 -5 404 261 42 8 chr17 75961096 75961215 -13543338 - MIR SINE MIR -66 196 74 21 0 0 0 chr17 75961913 75961934 -13542619 + AT_rich Low_complexity Low_complexity 1 21 0 231 114 0 0 chr17 75963542 75963586 -13540967 + (T)n Simple_repeat Simple_repeat 1 44 0 24 0 0 0 chr17 75963978 75964002 -13540551 + AT_rich Low_complexity Low_complexity 1 24 0 1905 164 7 0 chr17 75965419 75965717 -13538836 + AluJb SINE Alu 1 300 -12 3521 140 10 0 chr17 75966164 75966686 -13537867 + MER1A DNA MER1_type 1 527 0 2180 111 3 0 chr17 75967466 75967764 -13536789 + AluSg SINE Alu 1 299 -11 2107 101 11 7 chr17 75971143 75971429 -13533124 - AluSq SINE Alu -24 289 3 325 284 61 66 chr17 75972166 75972363 -13532190 + L1MEd LINE L1 942 1137 -4982 2176 120 0 19 chr17 75972363 75972680 -13531873 + AluSx SINE Alu 1 311 -1 234 324 57 29 chr17 75972930 75973140 -13531413 + HAL1b LINE L1 399 614 -734 274 242 38 15 chr17 75973313 75973445 -13531108 + (TATAA)n Simple_repeat Simple_repeat 5 139 0 236 289 0 13 chr17 75973537 75973613 -13530940 - LTR67 LTR ERVL -21 536 462 13332 152 39 11 chr17 75973648 75973811 -13530742 + Tigger1 DNA MER2_type 35 192 -2226 5887 114 22 10 chr17 75973811 75975383 -13529170 - L1PA14 LINE L1 -17 6144 4563 13332 152 39 11 chr17 75975383 75977539 -13527014 + Tigger1 DNA MER2_type 192 2418 0 186 290 145 0 chr17 75978710 75978779 -13525774 + MER5B DNA MER1_type 53 131 -47 777 311 110 21 chr17 75978863 75979300 -13525253 - L2 LINE L2 0 3313 2838 1109 56 7 0 chr17 75979835 75979979 -13524574 + L1PA8 LINE L1 6021 6165 -7 210 71 0 0 chr17 75981294 75981322 -13523231 + (T)n Simple_repeat Simple_repeat 1 28 0 231 260 32 8 chr17 75981651 75981774 -13522779 + (TA)n Simple_repeat Simple_repeat 2 127 0 21 71 0 0 chr17 75981843 75981885 -13522668 + AT_rich Low_complexity Low_complexity 1 42 0 1851 127 19 26 chr17 75984104 75984245 -13520308 - AluSg SINE Alu -4 306 166 4247 101 66 11 chr17 75984245 75984897 -13519656 + LTR12 LTR ERV1 1 688 0 1851 127 19 26 chr17 75984897 75985063 -13519490 - AluSg SINE Alu -144 166 1 1102 168 101 5 chr17 75985330 75985539 -13519014 - MSTA LTR MaLR 0 428 200 994 201 21 0 chr17 75985539 75985728 -13518825 + LTR53 LTR ERVL 320 512 -7 822 80 212 0 chr17 75985937 75986088 -13518465 - MSTA LTR MaLR -244 184 2 1775 199 84 39 chr17 75986453 75986941 -13517612 - MER67D LTR ERV1 -4 510 1 483 271 136 49 chr17 75986944 75987459 -13517094 - LTR50 LTR ERVL -199 596 4 21 57 0 0 chr17 75987811 75987846 -13516707 + AT_rich Low_complexity Low_complexity 1 35 0 439 257 40 80 chr17 75988176 75988351 -13516202 - MIR SINE MIR -13 249 82 295 414 84 4 chr17 75988398 75988635 -13515918 - MIR SINE MIR -2 260 5 1312 111 0 0 chr17 75988737 75988918 -13515635 + L1PA13 LINE L1 5962 6142 -21 1288 244 4 4 chr17 75989222 75989488 -13515065 + Tigger7 DNA MER2_type 2 267 -2220 1464 138 31 0 chr17 75989502 75989756 -13514797 - Tigger5 DNA MER2_type 0 2323 2062 356 143 32 16 chr17 75989752 75989815 -13514738 - Tigger5 DNA MER2_type -2259 64 1 * 352 159 57 0 chr17 75989817 75989884 -13514669 + Tigger7 DNA MER2_type 2405 2487 0 231 296 23 0 chr17 75991150 75991238 -13513315 + L1ME LINE L1 5566 5655 -466 275 167 0 0 chr17 75991286 75991334 -13513219 + L1ME LINE L1 5739 5786 -335 218 213 0 0 chr17 75991529 75991576 -13512977 + T-rich Low_complexity Low_complexity 1 47 0 6383 29 12 1 chr17 75991577 75992337 -13512216 - L1PA4 LINE L1 0 6155 5388 227 280 79 63 chr17 75993168 75993357 -13511196 + MLT1J2 LTR MaLR 21 212 -238 2358 79 0 0 chr17 75993800 75994091 -13510462 - AluSc SINE Alu -18 291 1 26 50 0 0 chr17 75994576 75994616 -13509937 + AT_rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr17 75994824 75994853 -13509700 + AT_rich Low_complexity Low_complexity 1 29 0 2050 115 13 30 chr17 75995828 75996133 -13508420 + AluSq SINE Alu 3 302 -11 439 264 33 43 chr17 75996214 75996514 -13508039 - L1MEc LINE L1 -4893 1670 1229 384 266 175 57 chr17 75996531 75996885 -13507668 - L1MEc LINE L1 -5264 1120 725 192 216 0 0 chr17 75997697 75997748 -13506805 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 934 340 130 27 chr17 75998417 75999017 -13505536 + L2 LINE L2 2316 2977 -337 2127 163 35 32 chr17 75999040 75999581 -13504972 + MLT2A2 LTR ERVL 1 548 -6 608 309 52 39 chr17 75999585 75999915 -13504638 + L2 LINE L2 2979 3312 -1 5915 111 20 26 chr17 76001167 76002119 -13502434 - L1MA2 LINE L1 0 6304 5359 1630 76 27 18 chr17 76002151 76002376 -13502177 + THE1C LTR MaLR 1 227 -148 1085 155 0 0 chr17 76002376 76002544 -13502009 + AluSg/x SINE Alu 127 294 -18 327 25 0 0 chr17 76003586 76003626 -13500927 + (TG)n Simple_repeat Simple_repeat 1 40 0 26 0 0 0 chr17 76004046 76004072 -13500481 + AT_rich Low_complexity Low_complexity 1 26 0 2502 90 119 5 chr17 76004544 76004946 -13499607 - LTR7 LTR ERV1 -2 448 1 21 57 0 0 chr17 76006179 76006214 -13498339 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr17 76006656 76006691 -13497862 + AT_rich Low_complexity Low_complexity 1 35 0 207 254 69 46 chr17 76006979 76007109 -13497444 + MIR SINE MIR 71 203 -59 219 167 0 0 chr17 76007143 76007185 -13497368 + (CA)n Simple_repeat Simple_repeat 2 43 0 333 363 139 23 chr17 76007800 76008188 -13496365 - L2 LINE L2 0 3272 2840 314 236 102 39 chr17 76008261 76008388 -13496165 - MIR SINE MIR -91 171 37 1927 114 0 0 chr17 76008701 76008963 -13495590 - AluSc SINE Alu -2 307 46 903 157 92 0 chr17 76009314 76009467 -13495086 + AluSg/x SINE Alu 136 302 -10 883 127 7 0 chr17 76010563 76010705 -13493848 + L1PA16 LINE L1 6019 6161 -5 3336 60 0 0 chr17 76010934 76011353 -13493200 - L1PA8 LINE L1 -8 6164 5746 278 241 96 12 chr17 76011510 76011593 -13492960 + MLT1H LTR MaLR 209 298 -251 258 319 82 82 chr17 76011995 76012265 -13492288 + L2 LINE L2 2072 2341 -973 209 234 16 0 chr17 76012289 76012353 -13492200 + GA-rich Low_complexity Low_complexity 4 68 0 223 186 0 0 chr17 76012803 76012846 -13491707 + T-rich Low_complexity Low_complexity 1 43 0 372 326 166 27 chr17 76012852 76013263 -13491290 - L2 LINE L2 -940 2374 1907 2460 131 48 17 chr17 76013388 76013809 -13490744 - MER57B LTR ERV1 0 434 1 1752 133 16 73 chr17 76014037 76014352 -13490201 - AluSx SINE Alu -15 297 1 772 327 96 19 chr17 76014380 76014851 -13489702 - LTR33 LTR ERVL 0 521 15 305 293 157 21 chr17 76015023 76015163 -13489390 + MIR SINE MIR 24 182 -80 23 0 0 0 chr17 76016851 76016874 -13487679 + AT_rich Low_complexity Low_complexity 1 23 0 694 254 46 5 chr17 76017246 76017443 -13487110 + L1M4 LINE L1 5 209 -6333 260 103 0 0 chr17 76017572 76017611 -13486942 - MADE1 DNA Mariner 0 80 42 184 365 19 10 chr17 76017724 76017828 -13486725 + L2 LINE L2 2179 2283 -1031 22 0 0 0 chr17 76018018 76018040 -13486513 + AT_rich Low_complexity Low_complexity 1 22 0 696 253 6 6 chr17 76018586 76018764 -13485789 - L1M4 LINE L1 -1892 4254 4077 298 303 73 0 chr17 76019154 76019263 -13485290 + MIR SINE MIR 65 181 -81 2526 57 0 0 chr17 76019297 76019594 -13484959 + AluY SINE Alu 3 299 -12 22 0 0 0 chr17 76019625 76019647 -13484906 + AT_rich Low_complexity Low_complexity 1 22 0 1431 191 19 50 chr17 76020418 76020780 -13483773 + L1MD3 LINE L1 7645 7995 0 22 0 0 0 chr17 76021136 76021158 -13483395 + AT_rich Low_complexity Low_complexity 1 22 0 618 217 33 0 chr17 76022304 76022456 -13482097 + MER69 DNA AcHobo 2365 2521 -5 29 28 0 0 chr17 76023023 76023059 -13481494 + AT_rich Low_complexity Low_complexity 1 36 0 2489 90 0 0 chr17 76023274 76023584 -13480969 + AluSq SINE Alu 1 310 -3 216 0 0 0 chr17 76023663 76023687 -13480866 + (CA)n Simple_repeat Simple_repeat 1 24 0 255 173 0 0 chr17 76023881 76023933 -13480620 + CT-rich Low_complexity Low_complexity 3 54 0 191 397 50 0 chr17 76024485 76024626 -13479927 - MIR SINE MIR -48 214 67 423 304 68 21 chr17 76024655 76024846 -13479707 + MIR SINE MIR 14 213 -49 1716 164 0 8 chr17 76024964 76025227 -13479326 + AluJo SINE Alu 3 263 -49 22 35 0 0 chr17 76026711 76026740 -13477813 + AT_rich Low_complexity Low_complexity 1 29 0 205 231 143 75 chr17 76026979 76027126 -13477427 + L2 LINE L2 2623 2779 -535 2707 88 10 15 chr17 76027282 76027691 -13476862 + L1PA13 LINE L1 5757 6163 0 278 79 0 0 chr17 76028664 76028702 -13475851 - MADE1 DNA Mariner -40 40 3 201 162 0 0 chr17 76028807 76028844 -13475709 + T-rich Low_complexity Low_complexity 1 37 0 412 285 90 29 chr17 76029097 76029409 -13475144 - L1ME4a LINE L1 -279 5842 5512 2298 111 0 0 chr17 76029808 76030115 -13474438 - AluSx SINE Alu -5 307 1 25 0 0 0 chr17 76031117 76031142 -13473411 + AT_rich Low_complexity Low_complexity 1 25 0 245 118 20 0 chr17 76031208 76031259 -13473294 + (TA)n Simple_repeat Simple_repeat 1 52 0 1716 150 17 13 chr17 76033089 76033389 -13471164 + AluJb SINE Alu 1 301 -11 26 82 0 0 chr17 76033406 76033467 -13471086 + AT_rich Low_complexity Low_complexity 1 61 0 1959 151 21 24 chr17 76033657 76033995 -13470558 + MER1B DNA MER1_type 1 337 0 308 227 9 24 chr17 76034037 76034149 -13470404 - L1MCa LINE L1 -1339 6983 1995 351 308 115 39 chr17 76034832 76035040 -13469513 - LTR33 LTR ERVL -73 448 225 243 257 59 10 chr17 76035133 76035234 -13469319 - LTR33 LTR ERVL -414 107 2 1993 98 3 63 chr17 76035704 76036021 -13468532 + AluY SINE Alu 1 298 -13 296 44 44 0 chr17 76036919 76036964 -13467589 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1896 103 8 4 chr17 76036975 76037238 -13467315 - AluSg SINE Alu -46 264 1 300 27 0 0 chr17 76038494 76038531 -13466022 + (CA)n Simple_repeat Simple_repeat 1 37 0 3980 276 42 36 chr17 76038536 76039795 -13464758 - MSTC-int LTR MaLR -319 1416 151 397 282 0 9 chr17 76039794 76039904 -13464649 - MSTC-int LTR MaLR -1258 113 5 * 2292 157 81 0 chr17 76039909 76040305 -13464248 - MSTC LTR MaLR 0 428 1 437 326 137 67 chr17 76040909 76041132 -13463421 + L2 LINE L2 2851 3057 -256 201 39 0 0 chr17 76041132 76041158 -13463395 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2354 39 0 11 chr17 76041160 76041444 -13463109 - AluY SINE Alu -30 281 1 437 326 137 67 chr17 76041444 76041634 -13462919 + L2 LINE L2 3057 3296 -17 21 0 0 0 chr17 76042254 76042275 -13462278 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 76043439 76043461 -13461092 + AT_rich Low_complexity Low_complexity 1 22 0 404 49 262 0 chr17 76043804 76043865 -13460688 + MADE1 DNA Mariner 1 77 -3 233 294 15 0 chr17 76044642 76044710 -13459843 + MIR SINE MIR 76 144 -64 1669 203 0 3 chr17 76045922 76046222 -13458331 - AluJb SINE Alu -13 299 1 22 35 0 0 chr17 76046589 76046618 -13457935 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr17 76048797 76048829 -13455724 + AT_rich Low_complexity Low_complexity 1 32 0 345 253 110 33 chr17 76048829 76049011 -13455542 - L1ME4a LINE L1 -2 6119 5924 378 310 30 39 chr17 76049036 76049239 -13455314 - L1ME4a LINE L1 -153 5968 5768 260 250 48 12 chr17 76050324 76050408 -13454145 + (TATATG)n Simple_repeat Simple_repeat 3 89 0 2325 53 0 3 chr17 76051434 76051755 -13452798 - AluY SINE Alu 0 320 1 986 171 26 66 chr17 76051803 76052031 -13452522 + MER20 DNA MER1_type 1 219 0 282 266 13 0 chr17 76053479 76053558 -13450995 + (TTCA)n Simple_repeat Simple_repeat 3 82 0 230 263 42 8 chr17 76053746 76053864 -13450689 + (TA)n Simple_repeat Simple_repeat 1 122 0 195 42 0 0 chr17 76054481 76054505 -13450048 + (CATG)n Simple_repeat Simple_repeat 3 26 0 189 159 23 23 chr17 76055380 76055424 -13449129 + L2 LINE L2 3268 3311 -2 189 0 0 0 chr17 76057162 76057183 -13447370 + (A)n Simple_repeat Simple_repeat 1 21 0 245 299 110 18 chr17 76058009 76058173 -13446380 - MIR SINE MIR 0 262 84 1028 230 19 0 chr17 76058732 76058945 -13445608 + MER58A DNA MER1_type 6 222 -2 1854 280 96 46 chr17 76059802 76060702 -13443851 + L1M2b LINE L1 1 945 -6264 1142 231 25 21 chr17 76060754 76061079 -13443474 + L1M2b LINE L1 1698 2023 -5186 * 5435 146 29 28 chr17 76061066 76062102 -13442451 + L1MA5 LINE L1 5264 6300 0 643 315 68 26 chr17 76063283 76063585 -13440968 + LTR33 LTR ERVL 47 370 -151 3239 88 25 5 chr17 76063585 76064028 -13440525 - MLT2A2 LTR ERVL 0 453 2 643 315 68 26 chr17 76064028 76064109 -13440444 + LTR33 LTR ERVL 370 446 -75 1105 230 45 9 chr17 76064117 76064393 -13440160 - MLT1A1 LTR MaLR -2 363 88 2001 142 0 0 chr17 76064554 76064863 -13439690 + AluSx SINE Alu 1 309 0 289 214 100 0 chr17 76067126 76067196 -13437357 + HAL1 LINE L1 32 108 -2399 655 237 43 55 chr17 76067197 76067398 -13437155 + MLT1F LTR MaLR 5 212 -355 23 68 0 0 chr17 76067544 76067588 -13436965 + AT_rich Low_complexity Low_complexity 1 44 0 269 353 7 7 chr17 76069448 76069584 -13434969 + (TGG)n Simple_repeat Simple_repeat 2 137 0 334 303 0 45 chr17 76069655 76069833 -13434720 + (TGG)n Simple_repeat Simple_repeat 2 171 0 330 91 0 0 chr17 76069907 76069962 -13434591 + (TA)n Simple_repeat Simple_repeat 1 55 0 288 77 0 0 chr17 76069961 76070000 -13434553 + (CA)n Simple_repeat Simple_repeat 2 40 0 * 1304 230 157 38 chr17 76070004 76070566 -13433987 - MLT1E2 LTR MaLR -5 621 9 1334 285 50 27 chr17 76071267 76071829 -13432724 - MER90 LTR ERV1 0 575 1 183 80 0 0 chr17 76071964 76071989 -13432564 + (ATG)n Simple_repeat Simple_repeat 3 27 0 202 274 310 0 chr17 76072070 76072183 -13432370 - MIR SINE MIR -19 243 96 1278 244 48 30 chr17 76072239 76072575 -13431978 - MER21B LTR ERV1 -107 756 415 2142 183 95 35 chr17 76072588 76072944 -13431609 + LTR32 LTR ERVL 15 403 -68 1965 122 52 0 chr17 76072944 76073231 -13431322 - AluSx SINE Alu -10 302 1 2142 183 95 35 chr17 76073231 76073305 -13431248 + LTR32 LTR ERVL 403 471 0 1138 261 76 33 chr17 76073309 76073677 -13430876 - MER21B LTR ERV1 -461 402 19 278 173 58 0 chr17 76073703 76073755 -13430798 - MER21B LTR ERV1 -777 86 32 531 114 0 57 chr17 76073759 76073917 -13430636 + (TC)n Simple_repeat Simple_repeat 2 150 0 453 237 229 0 chr17 76074291 76074409 -13430144 - MER5A DNA MER1_type 0 189 45 26 0 0 0 chr17 76074755 76074781 -13429772 + AT_rich Low_complexity Low_complexity 1 26 0 664 220 81 12 chr17 76076068 76076241 -13428312 + MER5A DNA MER1_type 2 186 -3 450 144 40 12 chr17 76076870 76077043 -13427510 + (TA)n Simple_repeat Simple_repeat 1 178 0 243 183 17 0 chr17 76077104 76077164 -13427389 + L1MC4 LINE L1 6640 6700 -1342 1662 160 14 99 chr17 76077278 76077704 -13426849 + MER57A LTR ERV1 1 390 -13 2165 175 68 52 chr17 76077763 76078259 -13426294 - MLT1D LTR MaLR -1 504 1 23 0 0 0 chr17 76078797 76078820 -13425733 + AT_rich Low_complexity Low_complexity 1 23 0 4322 51 0 0 chr17 76080276 76080806 -13423747 + L1PA6 LINE L1 5625 6154 0 180 152 0 0 chr17 76081519 76081552 -13423001 + T-rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr17 76081775 76081796 -13422757 + AT_rich Low_complexity Low_complexity 1 21 0 216 97 0 0 chr17 76082500 76082531 -13422022 + (TA)n Simple_repeat Simple_repeat 1 31 0 2028 241 75 7 chr17 76083090 76083849 -13420704 - L1MCc LINE L1 -3164 3777 2967 729 241 58 73 chr17 76083863 76084351 -13420202 - L1MCc LINE L1 -4889 1534 1364 231 88 0 0 chr17 76084351 76084385 -13420168 + (TG)n Simple_repeat Simple_repeat 2 35 0 729 241 58 73 chr17 76084385 76084596 -13419957 - L1MCc LINE L1 -5059 1364 1151 773 231 4 97 chr17 76084600 76084838 -13419715 - MER20 DNA MER1_type 0 219 4 340 330 56 69 chr17 76084987 76085220 -13419333 - L1MCc LINE L1 -5493 930 701 2273 109 14 0 chr17 76085393 76085726 -13418827 + L1PA10 LINE L1 5754 6094 -74 398 145 0 12 chr17 76085734 76085817 -13418736 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 21 57 0 0 chr17 76085830 76085865 -13418688 + AT_rich Low_complexity Low_complexity 1 35 0 685 344 75 20 chr17 76086263 76086612 -13417941 - HERVL LTR ERVL -1207 4447 4080 1697 194 27 16 chr17 76088703 76089074 -13415479 - THE1C LTR MaLR 0 375 1 231 157 20 20 chr17 76089499 76089550 -13415003 + MLT1K LTR MaLR 194 244 -344 1105 200 50 148 chr17 76089638 76090097 -13414456 - MLT2B1 LTR ERVL 0 414 1 234 311 59 34 chr17 76090419 76090538 -13414015 + MIR SINE MIR 15 136 -126 281 312 32 0 chr17 76090539 76090632 -13413921 - L2 LINE L2 0 3272 3177 207 179 0 0 chr17 76091483 76091522 -13413031 + T-rich Low_complexity Low_complexity 2 40 0 2093 146 0 0 chr17 76091524 76091832 -13412721 - AluJo SINE Alu -4 308 1 243 224 0 0 chr17 76092611 76092687 -13411866 + (TA)n Simple_repeat Simple_repeat 1 76 0 1965 138 0 0 chr17 76092687 76092969 -13411584 - AluSg SINE Alu -26 284 3 22 0 0 0 chr17 76092973 76092995 -13411558 + AT_rich Low_complexity Low_complexity 1 22 0 264 294 123 20 chr17 76093047 76093193 -13411360 - HAL1 LINE L1 -208 2299 2139 236 299 161 23 chr17 76093466 76093683 -13410870 - HAL1 LINE L1 -963 1544 1298 183 80 0 0 chr17 76093683 76093708 -13410845 + (TTA)n Simple_repeat Simple_repeat 2 26 0 311 275 33 0 chr17 76093724 76093815 -13410738 - HAL1 LINE L1 -1287 1220 1127 625 384 9 18 chr17 76093829 76094157 -13410396 + L2 LINE L2 2580 2904 -410 1929 128 14 3 chr17 76094275 76094592 -13409961 + AluSx SINE Alu 1 320 0 1420 183 0 60 chr17 76094696 76095062 -13409491 + L1MA8 LINE L1 5946 6289 -2 2070 132 10 0 chr17 76095235 76095538 -13409015 + AluSx SINE Alu 1 306 -6 1992 151 73 14 chr17 76097580 76097924 -13406629 + THE1B LTR MaLR 1 364 0 382 66 0 2 chr17 76098611 76098669 -13405884 - MLT2A1 LTR ERVL 0 444 393 627 99 63 3 chr17 76098669 76099010 -13405543 + (TA)n Simple_repeat Simple_repeat 1 361 0 654 128 49 0 chr17 76099031 76099462 -13405091 + (TA)n Simple_repeat Simple_repeat 1 451 0 3066 86 0 5 chr17 76099482 76099888 -13404665 - MLT2A1 LTR ERVL -40 404 1 18241 70 24 3 chr17 76099888 76102246 -13402307 - HERVL-A1 LTR ERVL 0 5654 3249 15185 59 1 1 chr17 76102247 76104103 -13400450 - HERVL-A1 LTR ERVL -3797 1857 1 2984 76 12 97 chr17 76104103 76104588 -13399965 - MLT2A1 LTR ERVL 0 444 1 24 53 0 0 chr17 76104608 76104646 -13399907 + AT_rich Low_complexity Low_complexity 1 38 0 22 56 0 0 chr17 76104896 76104932 -13399621 + AT_rich Low_complexity Low_complexity 1 36 0 230 426 0 0 chr17 76105252 76105360 -13399193 + MIR SINE MIR 19 126 -136 767 241 53 10 chr17 76105486 76105693 -13398860 + MER58A DNA MER1_type 4 219 -5 189 107 0 0 chr17 76105898 76105926 -13398627 + (TTCTC)n Simple_repeat Simple_repeat 3 30 0 189 74 0 0 chr17 76106298 76106325 -13398228 + (GA)n Simple_repeat Simple_repeat 2 28 0 13962 29 0 43 chr17 76106870 76109448 -13395105 - L1PA4 LINE L1 0 6155 3659 24 32 0 0 chr17 76109479 76109510 -13395043 + AT_rich Low_complexity Low_complexity 1 31 0 311 339 0 18 chr17 76110285 76110394 -13394159 - L2 LINE L2 -26 3246 3140 202 325 17 92 chr17 76110432 76110552 -13394001 - L2 LINE L2 -236 3036 2926 198 371 54 48 chr17 76112660 76112846 -13391707 + L2 LINE L2 2690 2876 -438 191 264 178 54 chr17 76113030 76113159 -13391394 + MIR SINE MIR 47 191 -71 372 230 74 7 chr17 76113767 76113902 -13390651 - L1MC5 LINE L1 -811 7150 7007 23 0 0 0 chr17 76113916 76113939 -13390614 + AT_rich Low_complexity Low_complexity 1 23 0 2144 117 3 16 chr17 76114033 76114342 -13390211 - AluSq SINE Alu -8 305 1 351 320 79 5 chr17 76114511 76114714 -13389839 - L1ME LINE L1 -379 5742 5525 22 35 0 0 chr17 76114909 76114938 -13389615 + AT_rich Low_complexity Low_complexity 1 29 0 268 159 23 0 chr17 76115840 76115884 -13388669 - MIR SINE MIR -143 65 21 249 326 121 33 chr17 76115986 76116201 -13388352 + L2 LINE L2 2983 3216 -56 2460 88 0 0 chr17 76116441 76116749 -13387804 - AluSc SINE Alu -1 308 1 288 0 0 0 chr17 76116834 76116866 -13387687 + (CA)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr17 76116865 76116894 -13387659 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 225 94 0 0 chr17 76116895 76116927 -13387626 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 2569 158 21 9 chr17 76116950 76117379 -13387174 + Tigger2a DNA MER2_type 1 434 0 225 258 0 0 chr17 76117437 76117503 -13387050 + (TATATG)n Simple_repeat Simple_repeat 1 66 0 237 133 0 50 chr17 76117503 76117563 -13386990 - L1MCa LINE L1 -4362 2064 2008 432 234 45 27 chr17 76118051 76118162 -13386391 + L2 LINE L2 3194 3306 -7 180 179 0 0 chr17 76118932 76118971 -13385582 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 22 56 0 0 chr17 76119370 76119406 -13385147 + AT_rich Low_complexity Low_complexity 1 36 0 1928 212 52 64 chr17 76119516 76120077 -13384476 + MLT2B3 LTR ERVL 1 554 0 1824 149 71 31 chr17 76120482 76120832 -13383721 - THE1B LTR MaLR 0 364 1 583 344 76 31 chr17 76121026 76121541 -13383012 - L2 LINE L2 -5 3308 2778 2253 102 0 0 chr17 76123369 76123654 -13380899 - AluSq SINE Alu -28 285 1 833 275 233 24 chr17 76123714 76124372 -13380181 + LTR50 LTR ERVL 1 795 0 262 280 56 37 chr17 76124559 76124666 -13379887 - HERV16 LTR ERVL -2078 2918 2810 2451 170 22 2 chr17 76124686 76125103 -13379450 - MSTB LTR MaLR -1 425 1 432 245 8 9 chr17 76125139 76125313 -13379240 + L1MDb LINE L1 1336 1512 -5031 272 237 139 57 chr17 76125444 76125638 -13378915 + L1MDb LINE L1 875 1084 -5325 6848 42 2 0 chr17 76125639 76126492 -13378061 - L1P LINE L1 -3408 2738 1884 1100 241 83 55 chr17 76126476 76127081 -13377472 + L1MDb LINE L1 1066 1682 -4724 * 2243 141 30 28 chr17 76128799 76129162 -13375391 - THE1B LTR MaLR 0 364 1 251 209 0 0 chr17 76129288 76129331 -13375222 + LTR33 LTR ERVL 104 146 -375 181 380 37 19 chr17 76130897 76130997 -13373556 + L2 LINE L2 3200 3304 -9 2037 129 3 0 chr17 76130997 76131283 -13373270 - AluSg SINE Alu -23 287 1 28 29 0 0 chr17 76131320 76131355 -13373198 + AT_rich Low_complexity Low_complexity 1 35 0 29 47 0 0 chr17 76131645 76131688 -13372865 + AT_rich Low_complexity Low_complexity 1 43 0 486 239 0 9 chr17 76131689 76131802 -13372751 + L1PB4 LINE L1 6045 6156 0 2482 75 3 0 chr17 76131915 76132220 -13372333 - AluY SINE Alu -5 306 1 274 243 14 0 chr17 76132660 76132734 -13371819 - MER116 DNA Mariner -5 75 1 23 0 0 0 chr17 76133978 76134001 -13370552 + AT_rich Low_complexity Low_complexity 1 23 0 206 364 70 14 chr17 76134825 76134968 -13369585 + MER5B DNA MER1_type 25 175 -3 188 83 0 28 chr17 76136574 76136610 -13367943 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 444 195 0 0 chr17 76137439 76137516 -13367037 + AluJo SINE Alu 1 77 -235 1259 167 0 0 chr17 76137518 76137733 -13366820 - AluSg/x SINE Alu -10 300 86 1505 138 0 9 chr17 76137733 76137957 -13366596 + AluJo SINE Alu 66 287 -25 22 0 0 0 chr17 76137957 76137979 -13366574 + AT_rich Low_complexity Low_complexity 1 22 0 258 261 23 0 chr17 76138864 76138952 -13365601 - L1MC4 LINE L1 -1339 6703 6614 317 322 0 0 chr17 76138972 76139062 -13365491 + L1MC4 LINE L1 6614 6703 -1339 329 311 0 0 chr17 76139068 76139158 -13365395 + L1MC4 LINE L1 6614 6703 -1339 311 326 0 0 chr17 76139115 76139204 -13365349 - L1MC4 LINE L1 -1340 6702 6614 * 323 315 0 0 chr17 76139233 76139322 -13365231 + L1MC4 LINE L1 6615 6703 -1339 323 315 0 0 chr17 76139355 76139444 -13365109 + L1MC4 LINE L1 6615 6703 -1339 390 184 0 0 chr17 76139447 76139523 -13365030 + (TA)n Simple_repeat Simple_repeat 1 76 0 339 300 0 0 chr17 76139524 76139614 -13364939 + L1MC4 LINE L1 6614 6703 -1339 212 189 38 0 chr17 76139615 76139668 -13364885 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 230 250 71 0 chr17 76139672 76139756 -13364797 + L1MC4 LINE L1 6614 6703 -1339 2033 112 28 3 chr17 76139793 76140080 -13364473 - AluSg1 SINE Alu -15 294 1 434 338 101 15 chr17 76140397 76140595 -13363958 + MIR SINE MIR 2 216 -46 224 286 0 0 chr17 76140649 76140705 -13363848 - MIR SINE MIR -58 150 95 1700 155 60 41 chr17 76140708 76141076 -13363477 - THE1C LTR MaLR 0 375 1 9105 126 48 38 chr17 76141085 76142630 -13361923 + THE1C-int LTR MaLR 21 1580 0 1570 165 57 49 chr17 76142632 76143002 -13361551 + THE1C LTR MaLR 3 375 0 267 288 0 0 chr17 76143093 76143152 -13361401 - L2 LINE L2 -3 3269 3211 189 0 0 0 chr17 76144054 76144075 -13360478 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 236 266 0 0 chr17 76145222 76145286 -13359267 + L3b LINE CR1 1102 1165 -418 2390 71 13 10 chr17 76145437 76145745 -13358808 + AluY SINE Alu 1 309 -2 21 0 0 0 chr17 76146094 76146115 -13358438 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr17 76147598 76147653 -13356900 + AT_rich Low_complexity Low_complexity 1 55 0 383 182 23 8 chr17 76149729 76149861 -13354692 + (TA)n Simple_repeat Simple_repeat 1 134 0 236 308 0 19 chr17 76150952 76151004 -13353549 + L2 LINE L2 3132 3182 -90 21 57 0 0 chr17 76151352 76151387 -13353166 + AT_rich Low_complexity Low_complexity 1 35 0 434 322 90 24 chr17 76151404 76151817 -13352736 - L1ME4a LINE L1 -105 6016 5577 210 71 0 0 chr17 76152565 76152593 -13351960 + (A)n Simple_repeat Simple_repeat 1 28 0 21 36 0 0 chr17 76152650 76152678 -13351875 + AT_rich Low_complexity Low_complexity 1 28 0 291 312 91 63 chr17 76153375 76153660 -13350893 - L2 LINE L2 -94 3219 2927 335 209 0 11 chr17 76153671 76153762 -13350791 + T-rich Low_complexity Low_complexity 5 94 0 2315 90 0 10 chr17 76153927 76154226 -13350327 - AluSg SINE Alu -14 296 1 264 314 81 8 chr17 76154287 76154411 -13350142 - MLT1J LTR MaLR -2 509 377 1919 153 3 10 chr17 76154611 76154912 -13349641 + AluJo SINE Alu 1 299 -13 376 276 105 29 chr17 76154927 76155137 -13349416 + MLT1L LTR MaLR 371 596 -19 2114 118 3 3 chr17 76155281 76155577 -13348976 - AluSx SINE Alu -16 296 1 283 351 99 14 chr17 76155801 76156012 -13348541 + MIR SINE MIR 1 229 -33 * 894 279 4 13 chr17 76155984 76156210 -13348343 - MIR SINE MIR -16 246 23 1358 83 18 0 chr17 76157683 76157852 -13346701 - AluSc SINE Alu -45 264 93 688 276 88 74 chr17 76158130 76158492 -13346061 - L1MEc LINE L1 -4722 1539 1167 456 202 0 0 chr17 76158492 76158586 -13345967 + L1PB4 LINE L1 6060 6153 -3 688 276 88 74 chr17 76158586 76158723 -13345830 - L1MEc LINE L1 -5094 1167 1033 383 228 57 46 chr17 76158742 76159005 -13345548 - L1MEc LINE L1 -5070 1000 735 697 243 33 19 chr17 76159545 76159755 -13344798 + MER58C DNA MER1_type 1 213 -2 230 281 81 38 chr17 76159783 76159993 -13344560 - HAL1 LINE L1 -1246 1261 1043 288 191 117 32 chr17 76160052 76160146 -13344407 + MLT1H LTR MaLR 445 546 -3 792 327 63 47 chr17 76160154 76160756 -13343797 - HAL1 LINE L1 -1886 621 10 702 237 107 23 chr17 76162036 76162251 -13342302 - MIR SINE MIR 0 262 30 21 0 0 0 chr17 76162433 76162454 -13342099 + AT_rich Low_complexity Low_complexity 1 21 0 329 344 153 0 chr17 76162756 76162913 -13341640 + MER5A DNA MER1_type 9 189 0 643 231 0 0 chr17 76163584 76163714 -13340839 + FLAM_C SINE Alu 3 132 -1 1044 107 0 0 chr17 76164150 76164300 -13340253 - AluSg/x SINE Alu 0 310 161 34 72 0 0 chr17 76165641 76165710 -13338843 + AT_rich Low_complexity Low_complexity 1 69 0 511 272 132 34 chr17 76165934 76166351 -13338202 - L1MC4a LINE L1 -312 5809 5492 1998 118 29 16 chr17 76168152 76168458 -13336095 + AluY SINE Alu 2 311 0 21 36 0 0 chr17 76169560 76169588 -13334965 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr17 76169618 76169650 -13334903 + AT_rich Low_complexity Low_complexity 1 32 0 239 79 26 0 chr17 76169881 76169919 -13334634 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 593 196 0 0 chr17 76170022 76170124 -13334429 + AluJ/FLAM SINE Alu 1 102 -210 322 337 30 10 chr17 76171782 76171883 -13332670 + L2 LINE L2 3169 3271 -1 22 0 0 0 chr17 76172403 76172425 -13332128 + AT_rich Low_complexity Low_complexity 1 22 0 3230 131 50 4 chr17 76174504 76175008 -13329545 - MER1A DNA MER1_type 0 527 1 195 100 0 0 chr17 76175136 76175166 -13329387 + (TAA)n Simple_repeat Simple_repeat 3 32 0 710 239 53 69 chr17 76175167 76175393 -13329160 - MIR SINE MIR -15 247 24 2104 111 0 7 chr17 76175393 76175691 -13328862 + AluSg SINE Alu 1 296 -14 710 239 53 69 chr17 76175691 76175711 -13328842 - MIR SINE MIR -238 24 5 475 214 8 48 chr17 76176065 76176191 -13328362 + MLT1H LTR MaLR 41 161 -388 813 269 101 43 chr17 76176236 76176341 -13328212 + MLT1H LTR MaLR 117 214 -335 216 0 0 0 chr17 76176341 76176365 -13328188 + (TC)n Simple_repeat Simple_repeat 2 25 0 813 269 101 43 chr17 76176365 76176656 -13327897 + MLT1H LTR MaLR 214 536 -13 249 33 0 0 chr17 76177744 76177774 -13326779 + (TG)n Simple_repeat Simple_repeat 1 30 0 1714 184 3 10 chr17 76179343 76179647 -13324906 + AluJb SINE Alu 9 310 -2 5557 164 30 31 chr17 76179651 76180994 -13323559 + L1MC1 LINE L1 4987 6333 0 723 316 117 34 chr17 76181086 76181555 -13322998 + MLT1H LTR MaLR 42 549 0 26 0 0 0 chr17 76181854 76181880 -13322673 + AT_rich Low_complexity Low_complexity 1 26 0 226 267 69 60 chr17 76182546 76182662 -13321891 + MLT1H-int LTR MaLR 1227 1343 -28 679 307 108 38 chr17 76182756 76183180 -13321373 + MLT1H LTR MaLR 84 537 -12 2301 110 0 0 chr17 76184125 76184435 -13320118 - AluY SINE Alu -1 310 1 184 111 0 0 chr17 76184462 76184489 -13320064 - L2 LINE L2 -36 3236 3210 1511 80 18 5 chr17 76184502 76184726 -13319827 - L1PB1 LINE L1 -1 6150 5924 2357 139 9 16 chr17 76184728 76185146 -13319407 + L1PB1 LINE L1 5380 5827 -324 1798 109 0 4 chr17 76185150 76185388 -13319165 + AluSq SINE Alu 1 237 -76 21 0 0 0 chr17 76185680 76185701 -13318852 + AT_rich Low_complexity Low_complexity 1 21 0 789 102 0 2 chr17 76185937 76186037 -13318516 - L1PB1 LINE L1 -233 5918 5816 1605 84 4 27 chr17 76186037 76186262 -13318291 - AluSq SINE Alu 0 313 94 789 102 0 2 chr17 76186262 76186277 -13318276 - L1PB1 LINE L1 -335 5816 5802 236 328 29 47 chr17 76188477 76188648 -13315905 + L3 LINE CR1 1191 1358 -219 5496 168 30 43 chr17 76188855 76189521 -13315032 + L1MC1 LINE L1 4943 5616 -717 1689 182 0 7 chr17 76189521 76189801 -13314752 - AluJb SINE Alu -34 278 1 5496 168 30 43 chr17 76189801 76190547 -13314006 + L1MC1 LINE L1 5616 6333 0 199 379 11 11 chr17 76190634 76190721 -13313832 - L2 LINE L2 -212 3060 2974 3270 193 79 36 chr17 76190852 76191112 -13313441 + L1MB1 LINE L1 4967 5214 -954 2449 69 3 3 chr17 76191112 76191417 -13313136 + AluY SINE Alu 1 305 -6 3270 193 79 36 chr17 76191417 76192268 -13312285 + L1MB1 LINE L1 5214 6124 -44 2143 118 0 0 chr17 76192268 76192557 -13311996 + AluSc SINE Alu 4 292 -17 3270 193 79 36 chr17 76192557 76192590 -13311963 + L1MB1 LINE L1 6124 6154 -14 807 113 0 0 chr17 76192976 76193082 -13311471 - MER30B DNA MER1_type 0 230 125 202 70 14 99 chr17 76193084 76193155 -13311398 + (TA)n Simple_repeat Simple_repeat 1 65 0 180 0 0 0 chr17 76193170 76193190 -13311363 + (TG)n Simple_repeat Simple_repeat 1 20 0 304 234 0 0 chr17 76193190 76193254 -13311299 - L1MC4 LINE L1 -1340 6702 6639 787 52 0 0 chr17 76193255 76193351 -13311202 - MER30B DNA MER1_type -94 96 1 306 173 111 12 chr17 76193883 76193964 -13310589 + MER53 DNA DNA 94 182 -7 * 436 88 73 0 chr17 76193907 76193975 -13310578 - MER53 DNA DNA -111 78 6 261 280 43 21 chr17 76194161 76194254 -13310299 + L2 LINE L2 3176 3270 -2 2457 122 8 3 chr17 76194826 76195188 -13309365 - THE1B LTR MaLR 0 364 1 465 261 87 109 chr17 76196293 76196572 -13307981 + MLT1J1 LTR MaLR 63 347 -99 2438 114 55 36 chr17 76196572 76196992 -13307561 + MSTA LTR MaLR 1 428 0 9017 177 15 6 chr17 76196992 76198629 -13305924 + MSTA-int LTR MaLR 1 1651 0 2466 148 24 5 chr17 76198629 76199049 -13305504 + MSTA LTR MaLR 1 428 0 465 261 87 109 chr17 76199049 76199089 -13305464 + MLT1J1 LTR MaLR 344 377 -69 528 352 101 40 chr17 76199133 76199883 -13304670 + L2 LINE L2 2481 3277 -36 320 51 0 0 chr17 76199899 76199938 -13304615 - MLT2B3 LTR ERVL 0 554 516 917 201 5 31 chr17 76199939 76200133 -13304420 + MST-int LTR MaLR 655 843 -808 1973 189 47 74 chr17 76200156 76200670 -13303883 - MLT2B3 LTR ERVL -54 500 1 38 68 0 0 chr17 76201173 76201246 -13303307 + AT_rich Low_complexity Low_complexity 1 73 0 1985 128 28 0 chr17 76201468 76201758 -13302795 - AluSx SINE Alu -14 298 1 180 0 0 0 chr17 76201815 76201835 -13302718 + (TG)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr17 76202572 76202594 -13301959 + AT_rich Low_complexity Low_complexity 1 22 0 273 257 10 10 chr17 76202899 76202982 -13301571 - MIR3 SINE MIR -21 187 102 1743 171 24 0 chr17 76203505 76203798 -13300755 + AluJo SINE Alu 1 300 -12 205 324 28 28 chr17 76203828 76203899 -13300654 - MIR SINE MIR -190 72 2 1111 41 41 12 chr17 76204633 76204641 -13299912 + (TTTC)n Simple_repeat Simple_repeat 1 185 0 1111 41 41 12 chr17 76204641 76204813 -13299740 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 237 410 87 6 chr17 76205692 76205865 -13298688 + L2 LINE L2 3073 3259 -13 310 206 16 0 chr17 76206158 76206221 -13298332 - MIR SINE MIR -25 237 174 183 69 0 0 chr17 76206253 76206282 -13298271 + MIR SINE MIR 171 199 -63 1999 113 3 55 chr17 76206662 76206991 -13297562 + AluSx SINE Alu 1 312 0 336 311 73 20 chr17 76208801 76208952 -13295601 + L3 LINE CR1 911 1069 -508 360 0 0 0 chr17 76208996 76209036 -13295517 + (GA)n Simple_repeat Simple_repeat 2 41 0 1835 151 6 28 chr17 76209173 76209491 -13295062 - AluJo SINE Alu -1 311 1 641 179 24 0 chr17 76209756 76209879 -13294674 + L1PB4 LINE L1 6028 6153 -3 2090 136 0 0 chr17 76210341 76210635 -13293918 - AluSx SINE Alu -18 294 1 758 65 0 0 chr17 76211107 76211199 -13293354 - AluSg SINE Alu -180 130 39 1044 110 0 0 chr17 76211199 76211344 -13293209 + AluSg/x SINE Alu 160 304 -8 474 335 70 10 chr17 76212727 76212927 -13291626 - MIR SINE MIR 0 262 51 207 69 0 0 chr17 76213358 76213387 -13291166 + (TG)n Simple_repeat Simple_repeat 1 29 0 806 251 11 0 chr17 76213647 76213834 -13290719 - MER5A DNA MER1_type 0 189 1 1694 138 21 35 chr17 76214027 76214317 -13290236 + AluJb SINE Alu 1 286 -26 705 279 18 14 chr17 76217226 76217445 -13287108 + MER58A DNA MER1_type 4 223 -1 762 269 24 40 chr17 76217482 76217731 -13286822 + MIR SINE MIR 6 250 -12 180 111 0 0 chr17 76218868 76218895 -13285658 + (TG)n Simple_repeat Simple_repeat 1 27 0 279 221 137 44 chr17 76219988 76220105 -13284448 + MIR SINE MIR 40 166 -58 1401 198 14 62 chr17 76220326 76220684 -13283869 - MER58B DNA MER1_type 0 341 1 213 152 22 0 chr17 76221425 76221471 -13283082 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 245 330 10 40 chr17 76223016 76223116 -13281437 + MIR SINE MIR 59 141 -67 524 322 44 0 chr17 76223276 76223459 -13281094 - MIR SINE MIR -6 256 66 369 0 0 0 chr17 76223739 76223780 -13280773 + (TG)n Simple_repeat Simple_repeat 2 42 0 250 409 0 18 chr17 76223875 76223985 -13280568 - L2 LINE L2 -31 3241 3134 551 231 95 101 chr17 76224323 76224727 -13279826 - MLT1A1 LTR MaLR -1 395 1 23 33 0 0 chr17 76226016 76226046 -13278507 + AT_rich Low_complexity Low_complexity 1 30 0 233 220 17 0 chr17 76227103 76227162 -13277391 + (CA)n Simple_repeat Simple_repeat 1 60 0 28 48 0 0 chr17 76227866 76227908 -13276645 + AT_rich Low_complexity Low_complexity 1 42 0 4485 221 165 11 chr17 76227989 76229464 -13275089 + L1PB1 LINE L1 728 2429 -5156 * 14897 190 8 24 chr17 76229454 76234301 -13270252 + L1PB1 LINE L1 2828 7588 -1 341 237 41 12 chr17 76234435 76234604 -13269949 + (TA)n Simple_repeat Simple_repeat 1 174 0 22 0 0 0 chr17 76235120 76235142 -13269411 + AT_rich Low_complexity Low_complexity 1 22 0 210 71 0 0 chr17 76235457 76235485 -13269068 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 502 267 90 101 chr17 76236020 76236455 -13268098 + Charlie7 DNA MER1_type 1 430 -2182 287 285 98 79 chr17 76236455 76236590 -13267963 + MIR SINE MIR 44 186 -76 2163 147 31 0 chr17 76236590 76236943 -13267610 + THE1B LTR MaLR 1 364 0 287 285 98 79 chr17 76236943 76237021 -13267532 + MIR SINE MIR 186 261 -1 257 167 21 0 chr17 76237126 76237174 -13267379 - MLT2D LTR ERVL 0 464 416 1864 162 54 14 chr17 76237223 76237575 -13266978 - MLT2D LTR ERVL -48 366 1 335 294 37 68 chr17 76237645 76237808 -13266745 - L2 LINE L2 -1 3312 3155 552 155 0 0 chr17 76237809 76237893 -13266660 + FLAM_A SINE Alu 44 127 -15 6377 85 0 21 chr17 76237908 76238673 -13265880 - L1PA12 LINE L1 -10 6158 5402 2209 114 0 7 chr17 76238673 76238971 -13265582 - AluSq SINE Alu -17 296 1 6377 85 0 21 chr17 76238971 76239242 -13265311 - L1PA12 LINE L1 -766 5402 5127 902 296 144 7 chr17 76239370 76239806 -13264747 - L2 LINE L2 -291 3022 2533 1266 192 24 16 chr17 76239860 76240115 -13264438 - MLT2D LTR ERVL -143 271 15 2152 286 97 27 chr17 76240125 76241147 -13263406 - L2 LINE L2 -778 2536 1444 879 162 7 0 chr17 76241184 76241338 -13263215 + L1MA5A LINE L1 6131 6285 -12 21 36 0 0 chr17 76241345 76241373 -13263180 + AT_rich Low_complexity Low_complexity 1 28 0 187 383 26 9 chr17 76241742 76241857 -13262696 - L2 LINE L2 -508 2806 2690 225 216 40 16 chr17 76241897 76241969 -13262584 + GA-rich Low_complexity Low_complexity 2 128 0 185 390 55 22 chr17 76242067 76242249 -13262304 - L2 LINE L2 -903 2411 2224 990 210 18 86 chr17 76242462 76242800 -13261753 + MER58D DNA MER1_type 1 315 -71 1300 216 8 0 chr17 76243059 76243295 -13261258 + Tigger5 DNA MER2_type 1 238 -2085 1264 151 25 50 chr17 76243290 76243451 -13261102 + Tigger5 DNA MER2_type 2090 2245 -78 * 2136 116 10 0 chr17 76243451 76243753 -13260800 + AluSx SINE Alu 1 305 -7 1264 151 25 50 chr17 76243753 76243830 -13260723 + Tigger5 DNA MER2_type 2245 2322 -1 1947 144 38 12 chr17 76243832 76244172 -13260381 - L1MC2 LINE L1 -422 5922 5574 1938 202 28 31 chr17 76244174 76244599 -13259954 + MSTB1 LTR MaLR 3 426 -6 925 160 52 10 chr17 76244599 76244793 -13259760 - L1MC2 LINE L1 -2458 5584 5383 869 180 7 0 chr17 76245281 76245431 -13259122 + MER74C LTR ERVL 148 298 -162 586 283 93 52 chr17 76245442 76245785 -13258768 + L1ME1 LINE L1 3029 3385 -2761 1482 195 17 11 chr17 76245786 76246073 -13258480 + AluJo SINE Alu 1 289 -23 22 35 0 0 chr17 76246073 76246102 -13258451 + AT_rich Low_complexity Low_complexity 1 29 0 2486 194 7 11 chr17 76246150 76246604 -13257949 + MER74C LTR ERVL 9 460 0 3915 227 53 91 chr17 76246609 76247392 -13257161 + L1ME1 LINE L1 3404 4215 -1951 2103 147 0 0 chr17 76247392 76247699 -13256854 + AluSx SINE Alu 2 308 -4 3915 227 53 91 chr17 76247699 76249779 -13254774 + L1ME1 LINE L1 4215 6148 -18 348 250 9 9 chr17 76251029 76251145 -13253408 + (TA)n Simple_repeat Simple_repeat 2 117 0 2423 60 0 3 chr17 76251267 76251565 -13252988 + AluY SINE Alu 15 311 0 420 326 44 31 chr17 76251668 76251895 -13252658 - MIR SINE MIR 0 262 33 408 111 0 0 chr17 76251902 76251965 -13252588 + (TCCCC)n Simple_repeat Simple_repeat 5 67 0 2294 97 0 3 chr17 76251969 76252279 -13252274 - AluSq SINE Alu -4 309 1 287 313 88 28 chr17 76253794 76253976 -13250577 + MIR SINE MIR 70 262 0 195 42 0 0 chr17 76254240 76254264 -13250289 + (CCA)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr17 76254286 76254308 -13250245 + (CA)n Simple_repeat Simple_repeat 2 23 0 878 206 106 20 chr17 76257217 76257416 -13247137 + MER58A DNA MER1_type 9 224 0 841 222 0 25 chr17 76257423 76257621 -13246932 + MER3 DNA MER1_type 9 201 -8 247 194 75 45 chr17 76258241 76258308 -13246245 + ORSL DNA AcHobo 1 69 -206 882 144 27 6 chr17 76258313 76258459 -13246094 + GA-rich Low_complexity Low_complexity 1 143 -590 2195 148 28 3 chr17 76258459 76258811 -13245742 - THE1B LTR MaLR -3 361 1 882 144 27 6 chr17 76258811 76259032 -13245521 + GA-rich Low_complexity Low_complexity 143 733 0 674 182 11 22 chr17 76259045 76259226 -13245327 + GA-rich Low_complexity Low_complexity 2 180 0 584 263 56 39 chr17 76259312 76259544 -13245009 + MIR SINE MIR 27 262 0 231 289 52 10 chr17 76259628 76259725 -13244828 + MER117 DNA MER1_type 18 118 -79 263 224 224 30 chr17 76259761 76259895 -13244658 + LTR48B LTR ERV1 1 160 -382 4202 161 23 1 chr17 76259920 76260616 -13243937 - MER50 LTR ERV1 -23 711 1 1141 217 95 32 chr17 76260621 76260967 -13243586 + MER39 LTR ERV1 340 707 0 229 0 0 77 chr17 76261211 76261250 -13243303 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 1487 195 6 28 chr17 76262606 76262929 -13241624 - MER58B DNA MER1_type -2 339 24 2023 121 45 0 chr17 76263355 76263644 -13240909 + AluSx SINE Alu 1 302 -10 2139 134 22 27 chr17 76263762 76264128 -13240425 - THE1B LTR MaLR 0 364 1 11313 103 5 2 chr17 76264128 76265704 -13238849 - THE1B-int LTR MaLR 0 1580 1 2024 155 22 30 chr17 76265709 76266070 -13238483 - THE1B LTR MaLR -5 359 2 4103 141 42 9 chr17 76266451 76267139 -13237414 - MER50 LTR ERV1 -23 711 1 215 369 106 19 chr17 76267410 76267570 -13236983 - MIR SINE MIR -81 181 8 1116 205 66 107 chr17 76267626 76268129 -13236424 + MER39 LTR ERV1 4 707 0 3351 157 7 22 chr17 76269831 76270423 -13234130 - MER41B LTR ERV1 0 635 53 2006 139 9 9 chr17 76270443 76270775 -13233778 - L1PB3 LINE L1 -4 6150 5819 1733 199 21 5 chr17 76270776 76271162 -13233391 + L1 LINE L1 4696 5087 -1059 434 147 0 0 chr17 76271173 76271241 -13233312 - MER41B LTR ERV1 -567 68 1 2030 121 0 0 chr17 76271478 76271790 -13232763 + AluSx SINE Alu 1 312 0 201 247 137 82 chr17 76271953 76272099 -13232454 - MIR SINE MIR -72 190 37 2360 106 0 0 chr17 76272282 76272593 -13231960 - AluY SINE Alu 0 311 1 2789 78 11 3 chr17 76273292 76273663 -13230890 + THE1C LTR MaLR 1 374 -1 480 305 17 17 chr17 76275629 76275806 -13228747 - MIR SINE MIR -18 244 68 2386 208 16 29 chr17 76275821 76276380 -13228173 + MER74B LTR ERVL 69 620 -2 663 183 22 14 chr17 76276448 76276727 -13227826 + CT-rich Low_complexity Low_complexity 1 281 0 1897 249 90 6 chr17 76276735 76277357 -13227196 - L1MD2 LINE L1 -17 6342 5669 506 284 115 75 chr17 76277404 76277872 -13226681 + MLT1G1 LTR MaLR 107 593 -2 25 0 0 0 chr17 76278634 76278659 -13225894 + AT_rich Low_complexity Low_complexity 1 25 0 2479 70 0 7 chr17 76279733 76280035 -13224518 - AluY SINE Alu -11 300 1 295 328 56 68 chr17 76280883 76281206 -13223347 + LTR16C LTR ERVL 170 488 -3 196 271 59 145 chr17 76281444 76281665 -13222888 + MIR SINE MIR 54 255 -7 310 369 97 0 chr17 76281903 76282098 -13222455 - MIR SINE MIR -2 260 47 246 321 30 0 chr17 76283348 76283479 -13221074 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 190 0 32 32 chr17 76283855 76283886 -13220667 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 327 49 0 0 chr17 76285230 76285271 -13219282 + (CA)n Simple_repeat Simple_repeat 1 41 0 1204 175 31 39 chr17 76285820 76285869 -13218684 + AluJo SINE Alu 86 134 -178 2347 94 0 0 chr17 76285869 76286166 -13218387 + AluSg1 SINE Alu 3 299 -10 1204 175 31 39 chr17 76286166 76286345 -13218208 + AluJo SINE Alu 134 312 0 28 0 0 0 chr17 76286933 76286961 -13217592 + AT_rich Low_complexity Low_complexity 1 28 0 2233 121 108 8 chr17 76286995 76287384 -13217169 + MSTA LTR MaLR 1 428 0 429 147 0 0 chr17 76287611 76287679 -13216874 - 5S rRNA rRNA -32 89 22 4057 97 18 0 chr17 76287679 76288280 -13216273 + L1MA3 LINE L1 5689 6300 -5 237 139 0 0 chr17 76289459 76289495 -13215058 + Alu SINE Alu 1 36 -266 1511 156 0 0 chr17 76289495 76289719 -13214834 + AluSg/x SINE Alu 72 295 -17 22 0 0 0 chr17 76290666 76290688 -13213865 + AT_rich Low_complexity Low_complexity 1 22 0 2327 97 3 0 chr17 76291730 76292040 -13212513 + AluSp SINE Alu 3 313 0 1078 178 8 3 chr17 76292831 76293160 -13211393 + AluJo SINE Alu 8 295 -17 2076 122 23 3 chr17 76294556 76294860 -13209693 + AluSx SINE Alu 1 310 -2 2175 123 0 3 chr17 76295055 76295365 -13209188 - AluSc SINE Alu 0 309 1 275 284 63 0 chr17 76295403 76295498 -13209055 - L1ME LINE L1 -489 5632 5532 228 298 154 10 chr17 76296326 76296430 -13208123 + MIR SINE MIR 31 149 -113 2301 102 13 0 chr17 76297438 76297743 -13206810 + AluY SINE Alu 1 309 -2 519 191 29 0 chr17 76298123 76298228 -13206325 - AluY SINE Alu 0 311 204 1403 151 38 91 chr17 76298228 76298503 -13206050 - MER39 LTR ERV1 -199 508 187 338 158 144 122 chr17 76298485 76298624 -13205929 - MER21A LTR ERV1 -735 196 55 * 251 253 0 13 chr17 76298976 76299055 -13205498 + GA-rich Low_complexity Low_complexity 1 78 0 2547 54 0 13 chr17 76299165 76299480 -13205073 + AluY SINE Alu 1 311 0 1252 109 0 23 chr17 76300128 76300302 -13204251 + AluSx SINE Alu 1 170 -142 1358 327 112 22 chr17 76300511 76301472 -13203081 + L2 LINE L2 620 1667 -1647 1727 183 80 34 chr17 76301476 76301913 -13202640 - LTR2B LTR ERV1 0 490 34 1477 333 66 56 chr17 76301936 76303015 -13201538 + L2 LINE L2 1670 2766 -547 2173 110 0 10 chr17 76303015 76303338 -13201215 + AluSc SINE Alu 1 309 0 1477 333 66 56 chr17 76303338 76303838 -13200715 + L2 LINE L2 2766 3259 -54 185 0 0 39 chr17 76304121 76304147 -13200406 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 813 289 34 8 chr17 76304752 76304987 -13199566 - MIR SINE MIR -21 241 1 25 31 0 0 chr17 76305110 76305142 -13199411 + AT_rich Low_complexity Low_complexity 1 32 0 204 40 0 0 chr17 76306843 76306868 -13197685 + (T)n Simple_repeat Simple_repeat 1 25 0 25 65 0 0 chr17 76307145 76307191 -13197362 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr17 76307314 76307335 -13197218 + AT_rich Low_complexity Low_complexity 1 21 0 2063 108 6 51 chr17 76307489 76307804 -13196749 - AluSq SINE Alu -12 301 1 1725 176 0 35 chr17 76308148 76308466 -13196087 - AluJo SINE Alu -5 307 1 417 39 0 0 chr17 76309622 76309673 -13194880 + (CA)n Simple_repeat Simple_repeat 2 52 0 485 137 0 0 chr17 76309691 76309764 -13194789 + MLT2A1 LTR ERVL 235 307 -137 818 203 41 149 chr17 76309764 76310133 -13194420 + L1MC3 LINE L1 6032 6360 -1425 * 3413 207 10 22 chr17 76310125 76310952 -13193601 + L1MC3 LINE L1 6961 7777 -8 2648 171 35 0 chr17 76311363 76311872 -13192681 + MER39 LTR ERV1 2 528 -179 4464 52 2 4 chr17 76311872 76312433 -13192120 + L1PA8 LINE L1 5607 6166 -6 29 0 0 0 chr17 76312481 76312510 -13192043 + AT_rich Low_complexity Low_complexity 1 29 0 923 135 18 18 chr17 76312511 76312681 -13191872 + MER39 LTR ERV1 533 702 -5 207 0 0 0 chr17 76313185 76313208 -13191345 + (T)n Simple_repeat Simple_repeat 1 23 0 480 167 0 0 chr17 76315961 76316039 -13188514 + AluJ/FLAM SINE Alu 1 78 -234 750 161 0 8 chr17 76316057 76316181 -13188372 + FLAM_C SINE Alu 1 123 -20 372 341 16 8 chr17 76317570 76317696 -13186857 - MIR SINE MIR -66 142 16 310 212 0 12 chr17 76319157 76319242 -13185311 - L1PA16 LINE L1 0 6166 6083 1675 184 0 3 chr17 76319244 76319538 -13185015 - AluJo SINE Alu -14 298 6 376 320 0 0 chr17 76319672 76319769 -13184784 + MER5A DNA MER1_type 10 106 -83 1585 150 34 34 chr17 76321328 76321481 -13183072 + L1MA10 LINE L1 6005 6157 -177 189 0 0 0 chr17 76321481 76321502 -13183051 + (CA)n Simple_repeat Simple_repeat 2 22 0 1585 150 34 34 chr17 76321502 76321668 -13182885 + L1MA10 LINE L1 6156 6324 -10 237 351 0 53 chr17 76321885 76321999 -13182554 + L2 LINE L2 2714 2821 -493 192 350 0 17 chr17 76322345 76322405 -13182148 + L2 LINE L2 3141 3199 -73 401 296 87 0 chr17 76325937 76326052 -13178501 + L2 LINE L2 3148 3272 0 222 91 0 0 chr17 76326228 76326261 -13178292 + (TG)n Simple_repeat Simple_repeat 2 34 0 344 234 0 43 chr17 76326267 76326361 -13178192 - L1MC4 LINE L1 -1339 6703 6614 248 77 26 0 chr17 76326362 76326401 -13178152 + (TA)n Simple_repeat Simple_repeat 1 40 0 1871 145 10 30 chr17 76327017 76327320 -13177233 - AluSx SINE Alu -15 297 1 2663 259 43 27 chr17 76327330 76328643 -13175910 - L1ME2 LINE L1 -9 6155 4829 441 0 0 0 chr17 76331568 76331617 -13172936 + (TA)n Simple_repeat Simple_repeat 2 50 0 264 364 68 34 chr17 76332030 76332384 -13172169 - L2 LINE L2 -609 2705 2340 2162 104 0 0 chr17 76332617 76332923 -13171630 + AluSg SINE Alu 3 308 0 272 278 113 30 chr17 76334207 76334340 -13170213 + MIR SINE MIR 61 204 -58 24 53 0 0 chr17 76334360 76334398 -13170155 + AT_rich Low_complexity Low_complexity 1 38 0 229 318 114 15 chr17 76334765 76334897 -13169656 - LTR33 LTR ERVL -350 171 27 1609 146 61 31 chr17 76336058 76336352 -13168201 - AluSx SINE Alu -9 303 1 28 29 0 0 chr17 76336960 76336995 -13167558 + AT_rich Low_complexity Low_complexity 1 35 0 1461 223 6 25 chr17 76337079 76337393 -13167160 + AluJb SINE Alu 4 311 -1 310 363 82 0 chr17 76338057 76338203 -13166350 - MIR3 SINE MIR -17 191 34 2084 87 19 84 chr17 76338954 76339276 -13165277 + AluSg SINE Alu 1 301 -9 1382 188 3 76 chr17 76339580 76339884 -13164669 + AluJo SINE Alu 1 282 -30 259 44 44 0 chr17 76339889 76339934 -13164619 + (TAAAA)n Simple_repeat Simple_repeat 3 49 0 193 104 0 42 chr17 76340384 76340432 -13164121 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 219 326 11 33 chr17 76340610 76340702 -13163851 + L2 LINE L2 1363 1452 -1862 2663 92 17 6 chr17 76340909 76341269 -13163284 + THE1B LTR MaLR 1 364 0 1795 144 57 41 chr17 76341379 76341748 -13162805 + THE1C LTR MaLR 1 375 0 371 361 27 27 chr17 76342105 76342368 -13162185 - L2 LINE L2 -496 2818 2556 336 94 0 0 chr17 76342600 76342653 -13161900 + (CA)n Simple_repeat Simple_repeat 2 54 0 353 219 24 18 chr17 76343196 76343365 -13161188 + (TA)n Simple_repeat Simple_repeat 1 170 0 238 354 115 0 chr17 76343536 76343649 -13160904 + L2 LINE L2 3142 3267 -5 353 216 11 34 chr17 76344486 76344662 -13159891 + (TATATG)n Simple_repeat Simple_repeat 3 174 0 219 216 11 23 chr17 76344710 76344798 -13159755 + (TA)n Simple_repeat Simple_repeat 2 88 0 211 357 55 22 chr17 76345074 76345346 -13159207 - L2 LINE L2 -477 2837 2557 225 211 0 0 chr17 76345582 76345634 -13158919 + (CA)n Simple_repeat Simple_repeat 2 53 0 351 313 70 8 chr17 76347400 76347528 -13157025 + MIR SINE MIR 2 137 -125 299 284 88 10 chr17 76349245 76349347 -13155206 + MIR3 SINE MIR 92 201 -7 21 0 0 0 chr17 76349420 76349441 -13155112 + AT_rich Low_complexity Low_complexity 1 21 0 6852 150 45 11 chr17 76349755 76350687 -13153866 - Tigger3b DNA MER2_type -1797 1231 249 2550 102 8 6 chr17 76350687 76351050 -13153503 + THE1B LTR MaLR 1 364 0 6852 150 45 11 chr17 76351050 76351307 -13153246 - Tigger3b DNA MER2_type -2779 249 2 262 296 0 11 chr17 76351454 76351542 -13153011 - L2 LINE L2 -189 3083 2997 203 267 0 0 chr17 76351581 76351626 -13152927 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 215 299 103 10 chr17 76352543 76352640 -13151913 - MIR SINE MIR -80 128 23 25 0 0 0 chr17 76353697 76353722 -13150831 + AT_rich Low_complexity Low_complexity 1 25 0 468 200 86 29 chr17 76353911 76354051 -13150502 + L1ME3A LINE L1 6018 6165 -5 * 1513 266 136 60 chr17 76354050 76354433 -13150120 - HAL1 LINE L1 -33 2474 2122 1793 178 0 0 chr17 76354433 76354719 -13149834 - AluJo SINE Alu -11 301 16 1513 266 136 60 chr17 76354719 76354894 -13149659 - HAL1 LINE L1 -385 2122 1962 270 0 0 0 chr17 76354894 76354924 -13149629 + (TG)n Simple_repeat Simple_repeat 2 31 0 1513 266 136 60 chr17 76354924 76355637 -13148916 - HAL1 LINE L1 -545 1962 1105 312 283 62 18 chr17 76356112 76356225 -13148328 + L2 LINE L2 3154 3271 -1 405 333 68 17 chr17 76356227 76356461 -13148092 - MIR SINE MIR 0 262 17 22 35 0 0 chr17 76356777 76356806 -13147747 + AT_rich Low_complexity Low_complexity 1 29 0 593 255 39 0 chr17 76357161 76357314 -13147239 + MER45A DNA AcHobo 2 160 -18 529 264 56 60 chr17 76357982 76358198 -13146355 - MLT1K LTR MaLR 0 588 374 1325 282 63 11 chr17 76358887 76359348 -13145205 - MLT1J LTR MaLR -26 485 1 1056 282 176 48 chr17 76359710 76360182 -13144371 - L2 LINE L2 0 3313 2903 1742 97 93 0 chr17 76360182 76360451 -13144102 + L1PA13 LINE L1 5865 6158 -5 1056 282 176 48 chr17 76360451 76360475 -13144078 - L2 LINE L2 -410 2903 2883 207 0 0 0 chr17 76360475 76360498 -13144055 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1056 282 176 48 chr17 76360498 76361054 -13143499 - L2 LINE L2 -430 2883 2111 1730 195 30 116 chr17 76361060 76361176 -13143377 + LTR9 LTR ERV1 1 125 -487 2299 97 3 0 chr17 76361176 76361487 -13143066 - AluSx SINE Alu 0 312 1 1730 195 30 116 chr17 76361487 76361933 -13142620 + LTR9 LTR ERV1 125 515 -97 1347 272 179 36 chr17 76362011 76362624 -13141929 - L2 LINE L2 -1227 2087 1387 249 83 0 0 chr17 76363316 76363352 -13141201 + (TG)n Simple_repeat Simple_repeat 2 37 0 275 222 50 30 chr17 76363358 76363457 -13141096 + L1MC4 LINE L1 7942 8042 0 31 58 0 0 chr17 76363459 76363511 -13141042 + AT_rich Low_complexity Low_complexity 1 52 0 822 267 99 12 chr17 76363572 76363891 -13140662 - L1M4 LINE L1 -1312 4834 4469 189 0 0 0 chr17 76363891 76363912 -13140641 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 822 267 99 12 chr17 76363912 76364008 -13140545 - L1M4 LINE L1 -1677 4469 4383 265 330 30 10 chr17 76364213 76364410 -13140143 - L1MEc LINE L1 -3995 2401 2201 368 330 11 64 chr17 76364457 76364645 -13139908 + MER91B DNA MER1_type 2 179 -11 268 325 39 17 chr17 76365281 76365492 -13139061 - L1 LINE L1 -1131 5015 4801 2322 90 38 41 chr17 76365504 76365869 -13138684 + THE1B LTR MaLR 1 364 0 1017 131 68 0 chr17 76366223 76366414 -13138139 + L1MA5 LINE L1 6092 6295 -5 266 308 199 12 chr17 76366654 76367086 -13137467 - L1 LINE L1 -1504 4642 4130 3374 128 46 32 chr17 76367692 76368317 -13136236 - L1MA5 LINE L1 -5 6295 5662 23 33 0 0 chr17 76368328 76368358 -13136195 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr17 76368940 76368987 -13135566 + AT_rich Low_complexity Low_complexity 1 47 0 5752 132 6 2 chr17 76371016 76371919 -13132634 - L1PA15 LINE L1 -6 6159 5254 349 290 80 22 chr17 76371974 76372112 -13132441 - MIR3 SINE MIR -44 164 19 440 283 9 0 chr17 76372318 76372431 -13132122 - MER81 DNA DNA 0 114 1 217 287 66 25 chr17 76372769 76372891 -13131662 - MIR SINE MIR -59 203 77 351 113 0 0 chr17 76373248 76373301 -13131252 + (CA)n Simple_repeat Simple_repeat 2 54 0 1048 244 16 12 chr17 76373400 76373719 -13130834 + MER33 DNA MER1_type 4 323 -1 6732 57 23 1 chr17 76374457 76376161 -13128392 + L1PA7 LINE L1 4453 6148 -6 270 95 0 0 chr17 76376179 76376221 -13128332 + (TG)n Simple_repeat Simple_repeat 2 43 0 389 286 218 0 chr17 76376541 76376688 -13127865 + MER5A DNA MER1_type 10 188 -1 847 329 111 5 chr17 76376761 76377175 -13127378 - LTR16B LTR ERVL -6 458 1 1780 151 0 11 chr17 76377257 76377529 -13127024 + AluJo SINE Alu 6 274 -38 436 152 13 0 chr17 76377532 76377611 -13126942 - L1MC1 LINE L1 -197 6136 6057 180 200 0 0 chr17 76377690 76377735 -13126818 + A-rich Low_complexity Low_complexity 1 45 0 3007 138 16 66 chr17 76377746 76378356 -13126197 + L1MC1 LINE L1 5754 6333 0 375 290 110 50 chr17 76379212 76379412 -13125141 - MIR SINE MIR 0 262 51 260 339 52 35 chr17 76379426 76379600 -13124953 - MER5A DNA MER1_type -1 188 1 420 20 0 0 chr17 76380887 76380936 -13123617 + (CA)n Simple_repeat Simple_repeat 2 50 0 1162 192 174 23 chr17 76380993 76381368 -13123185 - MLT1C LTR MaLR -31 428 9 2307 164 44 2 chr17 76381368 76381777 -13122776 - MSTB LTR MaLR 0 426 1 1377 167 205 20 chr17 76382262 76382555 -13121998 - MER7A DNA MER2_type -1 345 1 2481 66 0 3 chr17 76382815 76383117 -13121436 - AluSc SINE Alu -8 301 1 21 0 0 0 chr17 76383720 76383741 -13120812 + AT_rich Low_complexity Low_complexity 1 21 0 373 35 0 53 chr17 76383794 76383851 -13120702 - L1P3 LINE L1 -400 5754 5701 1733 47 0 34 chr17 76383853 76384087 -13120466 + L1PA7 LINE L1 5929 6154 0 311 216 195 33 chr17 76385686 76385849 -13118704 + MIR SINE MIR 14 200 -61 194 203 0 34 chr17 76385850 76385909 -13118644 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 5538 129 17 5 chr17 76386240 76387505 -13117048 + L1PA16 LINE L1 4879 6157 -9 1505 74 5 5 chr17 76387512 76387701 -13116852 + AluSq SINE Alu 100 288 -25 207 0 0 0 chr17 76387704 76387727 -13116826 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 180 0 0 0 chr17 76388493 76388513 -13116040 + (TAAAAA)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr17 76388524 76388553 -13116000 + AT_rich Low_complexity Low_complexity 1 29 0 282 256 26 0 chr17 76388621 76388699 -13115854 + MIR SINE MIR 135 214 -48 1296 168 14 0 chr17 76388970 76389178 -13115375 - AluJb SINE Alu -16 296 86 379 319 55 27 chr17 76389218 76389781 -13114772 - L1ME LINE L1 -337 5833 5258 323 247 210 43 chr17 76389950 76390112 -13114441 - MER5A DNA MER1_type 0 189 1 2083 124 0 33 chr17 76391344 76391650 -13112903 - AluSx SINE Alu -16 296 1 201 39 0 0 chr17 76393810 76393836 -13110717 + (CA)n Simple_repeat Simple_repeat 1 26 0 583 236 23 65 chr17 76394362 76394578 -13109975 + MER3 DNA MER1_type 3 209 0 268 339 48 24 chr17 76394807 76394975 -13109578 + MIR SINE MIR 17 188 -74 2373 88 0 0 chr17 76395238 76395532 -13109021 + AluSg SINE Alu 1 294 -16 925 211 77 0 chr17 76395665 76395873 -13108680 + MER58A DNA MER1_type 1 224 0 206 297 62 0 chr17 76395979 76396043 -13108510 - L2 LINE L2 -4 3309 3242 361 314 0 9 chr17 76397154 76397259 -13107294 + MER5A DNA MER1_type 84 187 -2 388 339 16 0 chr17 76397361 76397482 -13107071 - L2 LINE L2 0 3313 3191 1516 115 12 0 chr17 76397494 76397737 -13106816 + L1MA1 LINE L1 6057 6302 0 24 53 0 0 chr17 76399282 76399320 -13105233 + AT_rich Low_complexity Low_complexity 1 38 0 724 284 22 14 chr17 76399450 76399672 -13104881 + MER58A DNA MER1_type 1 224 0 272 385 0 11 chr17 76399675 76399766 -13104787 + MIR SINE MIR 12 101 -161 272 146 0 0 chr17 76401207 76401248 -13103305 - L2 LINE L2 -93 3220 3180 343 179 47 132 chr17 76402004 76402028 -13102525 - L2 LINE L2 -8 3264 3240 2346 165 49 2 chr17 76402028 76402435 -13102118 - MSTB LTR MaLR 0 426 1 343 179 47 132 chr17 76402435 76402516 -13102037 - L2 LINE L2 -32 3240 3168 1360 211 59 111 chr17 76403372 76403911 -13100642 - MLT2B1 LTR ERVL 0 515 5 301 309 110 0 chr17 76404260 76404396 -13100157 - MIR SINE MIR -13 249 99 523 229 6 103 chr17 76404818 76404863 -13099690 + MER58A DNA MER1_type 1 49 -292 2214 104 13 0 chr17 76404863 76405161 -13099392 - AluSp SINE Alu -11 302 1 523 229 6 103 chr17 76405161 76405180 -13099373 + MER58A DNA MER1_type 49 68 -273 1655 187 0 24 chr17 76405180 76405474 -13099079 - AluJo SINE Alu -20 292 6 523 229 6 103 chr17 76405474 76405583 -13098970 + MER58A DNA MER1_type 68 158 -66 234 91 0 0 chr17 76407498 76407531 -13097022 + (TG)n Simple_repeat Simple_repeat 2 34 0 246 278 79 48 chr17 76408281 76408407 -13096146 - MIR3 SINE MIR -1 207 78 3191 28 3 8 chr17 76408555 76408943 -13095610 + L1PA4 LINE L1 5770 6155 0 24 32 0 0 chr17 76410203 76410234 -13094319 + AT_rich Low_complexity Low_complexity 1 31 0 1301 99 0 0 chr17 76410989 76411151 -13093402 + AluSq SINE Alu 96 257 -56 1702 130 0 4 chr17 76411477 76411708 -13092845 - AluJb SINE Alu -15 297 68 9932 77 3 1 chr17 76411709 76413055 -13091498 - L1P3 LINE L1 -5112 1349 1 319 94 0 0 chr17 76413103 76413156 -13091397 + L1MB4 LINE L1 6127 6179 -1 1674 246 58 81 chr17 76413179 76414010 -13090543 - L1MC4a LINE L1 -1552 7051 6240 305 252 33 64 chr17 76414082 76414348 -13090205 - L1MCc LINE L1 -4999 1424 1180 1423 243 67 42 chr17 76414734 76415215 -13089338 - MLT1D LTR MaLR -9 496 4 319 242 33 0 chr17 76415331 76415422 -13089131 - LTR16A LTR ERVL -5 445 352 969 186 81 124 chr17 76415425 76415494 -13089059 - MLT1C LTR MaLR 0 467 397 2255 101 7 0 chr17 76415494 76415791 -13088762 + AluSp SINE Alu 1 299 -14 969 186 81 124 chr17 76415791 76416189 -13088364 - MLT1C LTR MaLR -70 397 20 544 318 24 9 chr17 76416223 76416434 -13088119 - LTR16A LTR ERVL -103 347 134 2497 283 96 48 chr17 76416569 76417730 -13086823 - HERV16 LTR ERVL -3506 1490 247 1826 113 0 34 chr17 76417730 76417996 -13086557 - AluSq SINE Alu -18 295 39 2497 283 96 48 chr17 76417996 76418256 -13086297 - HERV16 LTR ERVL -4749 247 1 898 316 130 0 chr17 76418261 76418653 -13085900 - LTR16A LTR ERVL -5 445 3 2170 124 3 40 chr17 76418947 76419325 -13085228 - L1PB1 LINE L1 -3 6148 5785 899 129 0 0 chr17 76419364 76419511 -13085042 - L1PB1 LINE L1 -360 5791 5645 3337 208 100 53 chr17 76419590 76420805 -13083748 + L1MC4a LINE L1 6015 7285 -523 23 78 0 0 chr17 76420838 76420889 -13083664 + AT_rich Low_complexity Low_complexity 1 51 0 434 262 6 22 chr17 76420930 76421113 -13083440 + (TA)n Simple_repeat Simple_repeat 1 180 0 2435 74 3 0 chr17 76421233 76421531 -13083022 + AluSp SINE Alu 1 299 -14 210 415 11 0 chr17 76422611 76422705 -13081848 - MIR SINE MIR -81 127 33 2351 97 6 0 chr17 76423779 76424090 -13080463 + AluSp SINE Alu 1 313 0 1457 119 12 66 chr17 76424179 76424422 -13080131 - MER30 DNA MER1_type 0 230 1 27 0 0 0 chr17 76424812 76424839 -13079714 + AT_rich Low_complexity Low_complexity 1 27 0 193 0 0 86 chr17 76425227 76425262 -13079291 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1895 134 0 0 chr17 76425315 76425576 -13078977 + AluSq SINE Alu 28 288 -25 1592 209 7 0 chr17 76425686 76425969 -13078584 - AluJo SINE Alu -27 285 1 252 0 0 0 chr17 76426743 76426771 -13077782 + (GA)n Simple_repeat Simple_repeat 1 28 0 355 354 7 0 chr17 76427923 76428067 -13076486 + CT-rich Low_complexity Low_complexity 4 148 0 1811 136 4 4 chr17 76429367 76429640 -13074913 + AluSx SINE Alu 1 273 -39 1269 239 46 55 chr17 76430706 76431145 -13073408 + L1MB7 LINE L1 5740 6174 -10 2297 88 0 7 chr17 76432534 76432831 -13071722 - AluSg SINE Alu -15 295 1 456 265 179 0 chr17 76433009 76433160 -13071393 - MER20 DNA MER1_type -1 218 41 473 282 87 31 chr17 76433209 76433404 -13071149 + MIR SINE MIR 19 224 -38 1749 143 7 4 chr17 76433610 76433882 -13070671 + AluSx SINE Alu 38 310 -2 636 320 20 24 chr17 76434085 76434332 -13070221 - MIR SINE MIR -5 257 12 234 160 0 0 chr17 76434796 76434846 -13069707 + (CA)n Simple_repeat Simple_repeat 2 51 0 1905 146 29 37 chr17 76435558 76435935 -13068618 + THE1C LTR MaLR 1 374 -1 288 0 0 0 chr17 76437093 76437125 -13067428 + (CA)n Simple_repeat Simple_repeat 2 33 0 484 363 84 8 chr17 76437271 76437533 -13067020 - L2 LINE L2 -205 3108 2827 338 367 106 21 chr17 76437587 76437963 -13066590 - L2 LINE L2 -452 2862 2455 519 304 32 46 chr17 76438063 76438280 -13066273 - MIR SINE MIR -38 224 11 271 346 125 0 chr17 76438407 76438543 -13066010 - MIR SINE MIR 0 262 110 1019 238 83 3 chr17 76438587 76438877 -13065676 + L1ME4a LINE L1 5355 5667 -497 1622 234 150 2 chr17 76438943 76439395 -13065158 - MLT2B1 LTR ERVL 0 520 2 1860 127 48 9 chr17 76439742 76440058 -13064495 + THE1C LTR MaLR 1 328 -47 317 367 42 30 chr17 76440630 76440867 -13063686 + L2 LINE L2 2814 3053 -219 473 315 19 6 chr17 76441427 76441589 -13062964 - MIR SINE MIR -31 231 68 1864 80 0 4 chr17 76442825 76443088 -13061465 + L1P LINE L1 5011 5272 -874 243 61 0 0 chr17 76444110 76444143 -13060410 + (A)n Simple_repeat Simple_repeat 1 33 0 308 211 62 16 chr17 76445917 76446045 -13058508 + L1ME4a LINE L1 5766 5899 -222 269 200 53 21 chr17 76446090 76446185 -13058368 + L1ME4a LINE L1 5984 6081 -40 947 281 22 0 chr17 76446364 76446592 -13057961 - MIR SINE MIR -25 237 5 558 43 0 0 chr17 76448856 76448925 -13055628 + (TG)n Simple_repeat Simple_repeat 1 69 0 727 188 18 12 chr17 76449535 76449705 -13054848 - L1MA4 LINE L1 0 6300 6130 2172 120 0 0 chr17 76449705 76449997 -13054556 - AluSx SINE Alu -20 292 1 2341 69 0 7 chr17 76450162 76450453 -13054100 + AluY SINE Alu 9 297 -14 826 188 29 1 chr17 76450459 76450650 -13053903 - L1MA4 LINE L1 -9 6288 6073 198 313 52 10 chr17 76452145 76452241 -13052312 + L3 LINE CR1 1471 1570 -7 318 365 76 13 chr17 76452304 76452619 -13051934 + L2 LINE L2 2397 2731 -583 322 303 32 19 chr17 76452689 76452844 -13051709 - MER103 DNA DNA -7 159 3 234 91 36 127 chr17 76453102 76453157 -13051396 - AluSq SINE Alu -12 287 238 1125 103 7 7 chr17 76453158 76453313 -13051240 - AluSq SINE Alu -129 184 30 4016 113 7 10 chr17 76453409 76454017 -13050536 - L1PB2 LINE L1 -7 6144 5539 687 291 54 24 chr17 76454379 76454674 -13049879 - L3b LINE CR1 -178 1405 1102 216 188 16 31 chr17 76455020 76455084 -13049469 + (TA)n Simple_repeat Simple_repeat 2 64 0 414 300 67 28 chr17 76455938 76456265 -13048288 + L1M4 LINE L1 3497 3836 -2310 705 109 76 17 chr17 76457908 76458027 -13046526 - AluSg/x SINE Alu -14 298 173 182 338 25 12 chr17 76458325 76458405 -13046148 + L3 LINE CR1 1231 1311 -266 2007 124 17 0 chr17 76458521 76458819 -13045734 - AluSx SINE Alu -9 303 1 22 0 0 0 chr17 76458870 76458892 -13045661 + AT_rich Low_complexity Low_complexity 1 22 0 543 338 157 22 chr17 76459152 76459522 -13045031 - L2 LINE L2 0 3313 2894 2139 112 0 40 chr17 76459525 76459846 -13044707 + AluSc SINE Alu 1 308 -1 341 283 47 9 chr17 76460016 76460122 -13044431 - L2 LINE L2 0 3313 3204 202 179 36 18 chr17 76460291 76460347 -13044206 + (CATA)n Simple_repeat Simple_repeat 2 58 0 277 285 16 24 chr17 76460347 76460470 -13044083 - L1ME LINE L1 -448 5673 5552 228 67 0 0 chr17 76461689 76461719 -13042834 + (CA)n Simple_repeat Simple_repeat 2 31 0 215 351 26 0 chr17 76462370 76462447 -13042106 - MIR3 SINE MIR -6 202 124 430 243 47 9 chr17 76462760 76462867 -13041686 - MER81 DNA DNA 0 114 4 743 262 101 40 chr17 76463584 76463832 -13040721 + MLT1H LTR MaLR 25 287 -262 254 306 18 88 chr17 76463882 76464052 -13040501 + MLT1H LTR MaLR 392 549 0 261 0 0 0 chr17 76465275 76465304 -13039249 + (A)n Simple_repeat Simple_repeat 1 29 0 2107 127 0 0 chr17 76466470 76466753 -13037800 - AluSx SINE Alu -29 283 1 390 21 0 0 chr17 76466971 76467018 -13037535 + (CA)n Simple_repeat Simple_repeat 2 48 0 213 39 0 0 chr17 76467017 76467043 -13037510 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 1996 163 50 43 chr17 76467596 76468121 -13036432 - MLT2A2 LTR ERVL 0 554 1 635 246 31 31 chr17 76468506 76468734 -13035819 - L1MB8 LINE L1 -6 6172 5945 2557 137 31 19 chr17 76470123 76470546 -13034007 - MSTA LTR MaLR 0 428 1 24 67 0 0 chr17 76470961 76471006 -13033547 + AT_rich Low_complexity Low_complexity 1 45 0 268 229 31 73 chr17 76471042 76471138 -13033415 - L1ME4a LINE L1 -56 6065 5974 489 249 29 28 chr17 76471194 76471367 -13033186 - MLT1H LTR MaLR -8 575 405 * 549 268 65 61 chr17 76471365 76471618 -13032935 - MLT1H LTR MaLR -246 303 12 237 355 47 0 chr17 76471728 76471897 -13032656 - L1ME4a LINE L1 -268 5853 5677 384 230 58 11 chr17 76474306 76474393 -13030160 - L2 LINE L2 0 3313 3223 492 287 43 63 chr17 76474650 76474904 -13029649 + MIR SINE MIR 11 259 -3 477 34 0 0 chr17 76475017 76475049 -13029504 + (CA)n Simple_repeat Simple_repeat 1 91 0 477 34 0 0 chr17 76475049 76475108 -13029445 + (CA)n Simple_repeat Simple_repeat 2 60 0 275 229 0 29 chr17 76475165 76475235 -13029318 - LTR33 LTR ERVL 0 521 454 525 307 26 5 chr17 76475379 76475568 -13028985 - LTR33 LTR ERVL -327 194 2 3795 141 16 0 chr17 76476496 76477108 -13027445 - L1PA15 LINE L1 -12 6153 5532 4884 207 34 9 chr17 76477108 76477626 -13026927 + L1P LINE L1 2792 3295 -2851 216 0 0 0 chr17 76477626 76477650 -13026903 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4884 207 34 9 chr17 76477650 76477991 -13026562 + L1P LINE L1 3295 3688 -2458 198 0 0 0 chr17 76477991 76478013 -13026540 + (CAA)n Simple_repeat Simple_repeat 3 24 0 4884 207 34 9 chr17 76478013 76478258 -13026295 + L1P LINE L1 3688 3925 -2221 279 277 0 0 chr17 76478758 76478823 -13025730 + MER20 DNA MER1_type 1 65 -154 228 213 0 0 chr17 76478828 76478875 -13025678 + MER20 DNA MER1_type 172 218 -1 231 114 0 0 chr17 76479877 76479912 -13024641 + (CA)n Simple_repeat Simple_repeat 1 35 0 798 249 18 44 chr17 76481103 76481328 -13023225 + LTR33 LTR ERVL 1 219 -302 240 246 62 0 chr17 76481419 76481484 -13023069 + LTR33 LTR ERVL 380 448 -73 326 195 12 0 chr17 76482043 76482125 -13022428 + (TA)n Simple_repeat Simple_repeat 2 84 0 22 0 0 0 chr17 76482300 76482322 -13022231 + AT_rich Low_complexity Low_complexity 1 22 0 231 203 0 0 chr17 76482909 76482968 -13021585 + (TG)n Simple_repeat Simple_repeat 2 60 0 1286 193 11 19 chr17 76484080 76484344 -13020209 + AluJb SINE Alu 44 305 -7 261 289 0 113 chr17 76484351 76484448 -13020105 - MIR3 SINE MIR -13 195 110 255 160 60 0 chr17 76484784 76484834 -13019719 - MER96B DNA MER1_type? -175 242 190 368 68 14 27 chr17 76485057 76485130 -13019423 - MER96B DNA MER1_type? -242 175 104 1906 127 24 7 chr17 76485134 76485426 -13019127 + AluSx SINE Alu 1 297 -15 533 182 0 7 chr17 76485426 76485580 -13018973 + (TA)n Simple_repeat Simple_repeat 1 153 0 214 266 191 0 chr17 76485665 76485759 -13018794 - MIR SINE MIR -5 257 146 6041 24 0 0 chr17 76486361 76487061 -13017492 + L1PA3 LINE L1 5453 6152 -3 239 333 104 0 chr17 76487942 76488038 -13016515 - L2 LINE L2 -9 3263 3158 339 96 0 0 chr17 76488143 76488195 -13016358 + (TA)n Simple_repeat Simple_repeat 2 53 0 3189 54 0 26 chr17 76489357 76489780 -13014773 - L1PA7 LINE L1 -3 6151 5740 6169 170 12 14 chr17 76489953 76491054 -13013499 - Ricksha DNA DNA -328 2918 1821 919 308 4 4 chr17 76491064 76491337 -13013216 - Ricksha DNA DNA -2948 298 26 4907 255 78 64 chr17 76492000 76494515 -13010038 + L1MD1 LINE L1 16 2564 -3976 967 176 12 2 chr17 76494515 76494842 -13009711 + MSTD LTR MaLR 1 396 0 1065 262 74 7 chr17 76494845 76495423 -13009130 + L1MD1 LINE L1 2564 3347 -3193 321 260 0 14 chr17 76495423 76495496 -13009057 + MER47A DNA MER2_type 1 72 -294 2080 142 0 0 chr17 76495506 76495802 -13008751 - AluSx SINE Alu -16 296 1 4666 232 61 69 chr17 76495881 76497573 -13006980 + L1MD1 LINE L1 3659 5364 -1176 2098 110 0 0 chr17 76497573 76497878 -13006675 + AluSg SINE Alu 1 305 0 4666 232 61 69 chr17 76497878 76498112 -13006441 + L1MD1 LINE L1 5364 5571 -969 2400 56 0 16 chr17 76498112 76498417 -13006136 + AluY SINE Alu 1 300 -11 4666 232 61 69 chr17 76498417 76498534 -13006019 + L1MD1 LINE L1 5571 5687 -853 * 4793 165 24 7 chr17 76498521 76499406 -13005147 + L1MA8 LINE L1 5388 6287 -4 4029 217 23 13 chr17 76499402 76500350 -13004203 + L1MD1 LINE L1 5677 6634 -2 * 2028 125 0 3 chr17 76500495 76500791 -13003762 + AluSq SINE Alu 1 295 -18 925 343 94 14 chr17 76501614 76502130 -13002423 + L2 LINE L2 2751 3313 0 236 304 108 29 chr17 76502731 76502833 -13001720 + L2 LINE L2 3182 3291 -22 240 86 0 0 chr17 76504302 76504337 -13000216 + (CA)n Simple_repeat Simple_repeat 1 35 0 604 235 40 105 chr17 76505138 76505385 -12999168 + MIR SINE MIR 4 234 -28 200 204 0 0 chr17 76506234 76506283 -12998270 + A-rich Low_complexity Low_complexity 1 49 0 744 286 106 42 chr17 76506397 76506925 -12997628 - L1ME4a LINE L1 -70 6051 5490 1963 131 0 0 chr17 76507382 76507693 -12996860 + AluSx SINE Alu 2 312 0 523 254 120 24 chr17 76508641 76508850 -12995703 + MIR SINE MIR 32 260 -2 532 324 64 10 chr17 76510819 76511023 -12993530 + MIR SINE MIR 35 249 -13 2860 162 71 24 chr17 76511057 76511631 -12992922 + MER7C DNA MER2_type 1 601 -1 246 116 0 0 chr17 76511657 76511700 -12992853 + (CA)n Simple_repeat Simple_repeat 2 44 0 1834 180 53 100 chr17 76511711 76511820 -12992733 + L1MA8 LINE L1 5691 5804 -487 207 0 0 0 chr17 76511820 76511843 -12992710 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1834 180 53 100 chr17 76511843 76511862 -12992691 + L1MA8 LINE L1 5804 5822 -469 2685 84 19 5 chr17 76511862 76512231 -12992322 + THE1C LTR MaLR 2 375 0 1834 180 53 100 chr17 76512231 76512680 -12991873 + L1MA8 LINE L1 5822 6242 -49 44 20 0 0 chr17 76512682 76512733 -12991820 + AT_rich Low_complexity Low_complexity 1 51 0 2084 122 0 0 chr17 76512733 76513020 -12991533 - AluSq SINE Alu -26 287 1 755 105 2 1 chr17 76513039 76513163 -12991390 + L1MB1 LINE L1 6060 6168 0 26 30 0 0 chr17 76513451 76513484 -12991069 + AT_rich Low_complexity Low_complexity 1 33 0 193 213 106 0 chr17 76513510 76513557 -12990996 + L2 LINE L2 2992 3043 -229 1681 172 41 87 chr17 76513672 76514085 -12990468 + MSTD LTR MaLR 3 396 0 510 164 173 0 chr17 76515954 76516064 -12988489 + L1MC1 LINE L1 6187 6315 -18 2044 149 0 0 chr17 76516084 76516386 -12988167 + AluSx SINE Alu 1 302 -10 39 60 0 0 chr17 76516487 76516554 -12987999 + AT_rich Low_complexity Low_complexity 1 67 0 1851 129 12 58 chr17 76516734 76517060 -12987493 - AluSp SINE Alu -2 311 1 210 240 211 19 chr17 76517358 76517462 -12987091 + MER5B DNA MER1_type 1 124 -54 217 225 0 0 chr17 76517888 76517928 -12986625 - L2 LINE L2 -10 3303 3264 231 213 0 0 chr17 76518256 76518303 -12986250 + HsTC2 DNA Tc2 31 77 -1821 220 380 60 24 chr17 76520293 76520459 -12984094 - L2 LINE L2 -994 2320 2149 465 184 27 0 chr17 76522552 76522699 -12981854 + (TCTA)n Simple_repeat Simple_repeat 2 152 0 3512 169 16 13 chr17 76523806 76524488 -12980065 - L1MA8 LINE L1 -11 6280 5597 340 301 121 25 chr17 76524489 76524688 -12979865 - MIR SINE MIR -2 260 43 2102 129 7 7 chr17 76524951 76525261 -12979292 - AluSq SINE Alu -3 310 1 757 52 0 0 chr17 76525912 76526009 -12978544 - L1PA8 LINE L1 -7 6165 6069 2063 94 35 0 chr17 76526075 76526361 -12978192 + AluSq SINE Alu 1 296 -17 2162 108 0 0 chr17 76527402 76527689 -12976864 + AluSc SINE Alu 1 287 -22 2265 54 0 0 chr17 76527757 76528037 -12976516 - L1PA6 LINE L1 -4 6150 5871 296 261 0 14 chr17 76529188 76529257 -12975296 - tRNA-Ile-ATT tRNA tRNA -7 70 3 2535 57 0 3 chr17 76529403 76529704 -12974849 - AluY SINE Alu -11 300 1 29 60 0 0 chr17 76530727 76530777 -12973776 + AT_rich Low_complexity Low_complexity 1 50 0 439 315 54 20 chr17 76531330 76531533 -12973020 + MIR SINE MIR 45 254 -8 206 175 0 25 chr17 76532560 76532600 -12971953 + T-rich Low_complexity Low_complexity 4 42 0 21 36 0 0 chr17 76533048 76533076 -12971477 + AT_rich Low_complexity Low_complexity 1 28 0 405 322 45 11 chr17 76533466 76533643 -12970910 + MIR SINE MIR 9 191 -71 763 271 33 16 chr17 76533734 76533978 -12970575 + MIR SINE MIR 1 248 -14 279 253 12 60 chr17 76534301 76534384 -12970169 - L2 LINE L2 0 3272 3194 427 160 180 201 chr17 76534561 76534805 -12969748 + MER8 DNA MER2_type 1 239 0 197 343 0 59 chr17 76536165 76536267 -12968286 - L2 LINE L2 -4 3268 3173 254 150 0 33 chr17 76537151 76537211 -12967342 + (GAAAA)n Simple_repeat Simple_repeat 3 60 0 1993 118 3 36 chr17 76537328 76537633 -12966920 + AluSq SINE Alu 1 295 -18 229 338 13 0 chr17 76538236 76538313 -12966240 + L2 LINE L2 3194 3271 -1 1939 117 0 4 chr17 76538864 76539130 -12965423 - AluSg SINE Alu 0 310 46 22 35 0 0 chr17 76539137 76539166 -12965387 + AT_rich Low_complexity Low_complexity 1 29 0 656 134 0 55 chr17 76539425 76539552 -12965001 + L1PA8 LINE L1 6048 6167 -5 369 278 40 3 chr17 76539811 76539963 -12964590 + MIR SINE MIR 65 259 -3 206 259 0 35 chr17 76539981 76540039 -12964514 + MER5A DNA MER1_type 129 184 -5 2027 115 0 24 chr17 76540049 76540345 -12964208 + AluSg SINE Alu 2 290 -20 450 281 0 0 chr17 76540376 76540490 -12964063 + MER3 DNA MER1_type 41 154 -55 1418 176 130 0 chr17 76540495 76540825 -12963728 + MER3 DNA MER1_type 2232 2604 0 435 38 0 0 chr17 76541002 76541055 -12963498 + (TG)n Simple_repeat Simple_repeat 2 54 0 323 316 11 0 chr17 76541346 76541441 -12963112 + MIR SINE MIR 151 246 -16 181 243 0 0 chr17 76541410 76541447 -12963106 + L2 LINE L2 3261 3297 -16 * 372 22 0 0 chr17 76541508 76541553 -12963000 + (TG)n Simple_repeat Simple_repeat 2 46 0 553 212 0 10 chr17 76542539 76542638 -12961915 + MER58 DNA MER1_type 1 98 -2322 262 108 554 0 chr17 76542651 76542716 -12961837 + MER58 DNA MER1_type 2318 2418 -2 2308 106 0 6 chr17 76544859 76545171 -12959382 + AluSp SINE Alu 4 313 0 438 332 67 31 chr17 76545368 76545591 -12958962 + MIR SINE MIR 13 243 -19 198 118 0 0 chr17 76546186 76546220 -12958333 + (GA)n Simple_repeat Simple_repeat 2 35 0 192 250 30 110 chr17 76546430 76546458 -12958095 - L2 LINE L2 -52 3261 3232 2446 109 43 0 chr17 76546458 76546805 -12957748 - THE1B LTR MaLR 0 364 3 192 250 30 110 chr17 76546805 76546876 -12957677 - L2 LINE L2 -81 3232 3170 225 146 0 0 chr17 76546876 76546924 -12957629 + (TC)n Simple_repeat Simple_repeat 1 48 0 234 91 0 0 chr17 76546943 76546976 -12957577 + (CA)n Simple_repeat Simple_repeat 2 34 0 864 298 34 61 chr17 76546986 76547499 -12957054 - L2 LINE L2 -260 3053 2552 704 300 114 0 chr17 76547480 76547753 -12956800 - L2 LINE L2 -939 2375 2072 * 3068 210 66 80 chr17 76547755 76547951 -12956602 + L1MC3 LINE L1 6012 6209 -1576 228 67 0 0 chr17 76547951 76547981 -12956572 + (TTG)n Simple_repeat Simple_repeat 1 30 0 3068 210 66 80 chr17 76547981 76548063 -12956490 + L1MC3 LINE L1 6209 6291 -1494 1319 126 5 23 chr17 76548063 76548277 -12956276 + L1PA8 LINE L1 5950 6159 -13 208 51 26 26 chr17 76548282 76548321 -12956232 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3068 210 66 80 chr17 76548321 76548693 -12955860 + L1MC3 LINE L1 6295 6654 -1131 396 40 0 0 chr17 76548693 76548743 -12955810 + (TA)n Simple_repeat Simple_repeat 1 50 0 3068 210 66 80 chr17 76548743 76549064 -12955489 + L1MC3 LINE L1 6654 6978 -807 379 266 45 45 chr17 76549482 76549659 -12954894 + L2 LINE L2 1916 2092 -1222 4109 208 90 7 chr17 76549678 76550689 -12953864 - L1MC3 LINE L1 -6 7779 6646 513 203 66 75 chr17 76550685 76550912 -12953641 + L1MA9 LINE L1 6086 6310 -2 * 696 184 43 27 chr17 76551279 76551464 -12953089 - MER53 DNA DNA 0 189 2 1118 135 43 0 chr17 76551664 76551849 -12952704 - L1PA14 LINE L1 -288 5873 5681 1889 109 7 3 chr17 76551849 76552141 -12952412 + L1PA14 LINE L1 5868 6161 0 550 206 63 143 chr17 76552458 76552589 -12951964 + MER20 DNA MER1_type 1 106 -113 4098 57 4 0 chr17 76552589 76553100 -12951453 - L1PA7 LINE L1 0 6154 5642 550 206 63 143 chr17 76553100 76553206 -12951347 + MER20 DNA MER1_type 106 219 0 318 362 68 73 chr17 76555275 76555615 -12948938 + L2 LINE L2 2934 3271 -1 1992 239 42 20 chr17 76558243 76558745 -12945808 + LTR40a LTR ERVL 1 513 -6 5559 58 3 8 chr17 76559056 76559768 -12944785 - L1PA7 LINE L1 0 6154 5447 239 247 86 86 chr17 76560381 76560543 -12944010 - LTR16C LTR ERVL -3 488 327 408 305 68 20 chr17 76561074 76561290 -12943263 + MIR SINE MIR 3 232 -30 2343 87 0 0 chr17 76561323 76561622 -12942931 - AluY SINE Alu -12 299 1 331 241 41 28 chr17 76561821 76561966 -12942587 + (TCTA)n Simple_repeat Simple_repeat 2 148 0 204 97 0 0 chr17 76563206 76563237 -12941316 + (GAGAA)n Simple_repeat Simple_repeat 3 33 0 197 369 136 0 chr17 76563655 76563758 -12940795 - L2 LINE L2 0 3313 3197 392 309 68 12 chr17 76564575 76564662 -12939891 - MLT1J LTR MaLR -2 509 428 865 27 18 0 chr17 76564662 76564774 -12939779 + (CA)n Simple_repeat Simple_repeat 2 115 0 392 309 68 12 chr17 76564774 76564848 -12939705 - MLT1J LTR MaLR -83 428 339 1130 259 104 39 chr17 76564856 76565431 -12939122 + MLT1G LTR MaLR 2 585 -4 281 305 12 0 chr17 76565540 76565622 -12938931 - MLT1J LTR MaLR -328 183 101 21 0 0 0 chr17 76565995 76566016 -12938537 + AT_rich Low_complexity Low_complexity 1 21 0 195 100 0 0 chr17 76566607 76566637 -12937916 + (TAA)n Simple_repeat Simple_repeat 1 30 0 430 297 149 5 chr17 76566645 76566840 -12937713 - MIR SINE MIR -2 260 38 1696 189 53 3 chr17 76566946 76567269 -12937284 + MER2 DNA MER2_type 2 340 -5 408 139 0 0 chr17 76567604 76567683 -12936870 + (CA)n Simple_repeat Simple_repeat 1 79 0 3490 15 0 0 chr17 76568958 76569358 -12935195 - L1PA2 LINE L1 -4 6151 5752 1613 11 0 0 chr17 76569358 76569539 -12935014 + L1PA2 LINE L1 5582 5762 -393 326 290 167 19 chr17 76569874 76570036 -12934517 + MER5A DNA MER1_type 2 187 -2 322 261 133 83 chr17 76570580 76570798 -12933755 - MIR SINE MIR -32 230 2 320 342 9 0 chr17 76570992 76571106 -12933447 - MIR3 SINE MIR -9 199 85 279 250 72 113 chr17 76571287 76571633 -12932920 - MLT1J LTR MaLR -169 380 1 48 18 0 0 chr17 76571966 76572021 -12932532 + AT_rich Low_complexity Low_complexity 1 55 0 202 204 41 0 chr17 76572031 76572080 -12932473 + (TA)n Simple_repeat Simple_repeat 2 52 0 554 209 14 14 chr17 76573111 76573250 -12931303 + L1MB8 LINE L1 6039 6177 -1 2580 184 4 7 chr17 76573741 76574193 -12930360 + MER66A LTR ERV1 28 478 0 1854 131 72 31 chr17 76574402 76574762 -12929791 - THE1C LTR MaLR 0 375 1 186 43 0 0 chr17 76575473 76575496 -12929057 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr17 76575572 76575595 -12928958 + AT_rich Low_complexity Low_complexity 1 23 0 * 439 214 80 50 chr17 76575590 76575828 -12928725 + L1MC5 LINE L1 7651 7895 -66 1987 159 13 0 chr17 76575834 76576135 -12928418 - AluJo SINE Alu -2 310 6 2270 140 52 26 chr17 76576296 76576717 -12927836 - MSTB1 LTR MaLR 0 432 1 614 243 28 44 chr17 76576729 76576910 -12927643 + MER45A DNA AcHobo 1 178 0 1800 241 46 35 chr17 76576951 76577490 -12927063 + MER77 LTR ERV1 55 599 -6 290 299 51 34 chr17 76577509 76577626 -12926927 + LTR33 LTR ERVL 95 213 -308 22 0 0 0 chr17 76578023 76578045 -12926508 + AT_rich Low_complexity Low_complexity 1 22 0 305 148 19 0 chr17 76578754 76578808 -12925745 - U7 snRNA snRNA -1 62 8 347 314 0 0 chr17 76580534 76580655 -12923898 + HAL1 LINE L1 781 901 -1606 655 222 39 7 chr17 76580779 76580932 -12923621 + MER5A DNA MER1_type 30 187 -2 250 262 57 14 chr17 76580962 76581103 -12923450 + HAL1 LINE L1 2170 2316 -191 419 291 47 34 chr17 76581105 76581253 -12923300 - L2 LINE L2 0 3313 3164 363 331 23 0 chr17 76581355 76581488 -12923065 - L2 LINE L2 -475 2839 2704 468 302 29 0 chr17 76581502 76581641 -12922912 + MLT1G LTR MaLR 2 144 -451 714 171 17 23 chr17 76581690 76582180 -12922373 + CT-rich Low_complexity Low_complexity 1 486 0 937 188 52 48 chr17 76582296 76582546 -12922007 + MLT1G LTR MaLR 340 590 0 455 250 188 0 chr17 76582591 76582719 -12921834 + MER5A DNA MER1_type 28 179 -10 2618 203 91 38 chr17 76582731 76583185 -12921368 - L1ME3 LINE L1 -2 6160 5731 237 108 0 0 chr17 76583185 76583222 -12921331 + (TG)n Simple_repeat Simple_repeat 1 37 0 2618 203 91 38 chr17 76583222 76583629 -12920924 - L1ME3 LINE L1 -431 5731 5254 835 226 70 95 chr17 76583644 76584178 -12920375 + MLT1E LTR MaLR 1 616 -8 372 186 138 0 chr17 76584194 76584337 -12920216 - L1P2 LINE L1 -665 5489 5325 447 163 0 0 chr17 76584339 76584419 -12920134 + (TA)n Simple_repeat Simple_repeat 1 80 0 2180 122 3 0 chr17 76584419 76584715 -12919838 - AluSx SINE Alu -15 297 1 323 248 28 64 chr17 76584719 76584828 -12919725 - L1M4 LINE L1 -825 5321 5217 379 80 0 0 chr17 76584828 76584878 -12919675 + U6 snRNA snRNA 2 51 -56 933 171 16 0 chr17 76584879 76585066 -12919487 + L1PA6 LINE L1 6 195 -6668 12510 188 34 36 chr17 76585069 76588562 -12915991 + L1PA6 LINE L1 634 4131 -2736 2114 132 3 3 chr17 76588562 76588858 -12915695 + AluSq SINE Alu 1 296 -17 12510 188 34 36 chr17 76588858 76589741 -12914812 + L1PA6 LINE L1 4131 5014 -1853 315 0 0 0 chr17 76589741 76589776 -12914777 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 12510 188 34 36 chr17 76589776 76591116 -12913437 + L1PA6 LINE L1 5014 6502 -365 1886 74 0 0 chr17 76591117 76591361 -12913192 + L1PA6 LINE L1 6627 6870 0 351 0 0 0 chr17 76591368 76591407 -12913146 + (TA)n Simple_repeat Simple_repeat 1 39 0 2407 78 67 6 chr17 76591407 76591754 -12912799 + L1PB1 LINE L1 5774 6151 0 469 130 0 0 chr17 76591765 76591834 -12912719 + U6 snRNA snRNA 33 101 -6 26 0 0 0 chr17 76591834 76591860 -12912693 + AT_rich Low_complexity Low_complexity 1 26 0 266 197 0 16 chr17 76591860 76591921 -12912632 - L1M4 LINE L1 -919 5227 5168 583 274 117 36 chr17 76591953 76592176 -12912377 - L2 LINE L2 -659 2655 2415 201 348 169 0 chr17 76592398 76592487 -12912066 + MIR SINE MIR 31 134 -74 23 33 0 0 chr17 76592529 76592559 -12911994 + AT_rich Low_complexity Low_complexity 1 30 0 315 262 194 16 chr17 76593152 76593343 -12911210 + MIR SINE MIR 30 254 -8 873 221 43 66 chr17 76593365 76593668 -12910885 - L1MB7 LINE L1 -56 6128 5833 804 206 46 32 chr17 76595857 76596076 -12908477 - MER58A DNA MER1_type -2 222 1 428 314 86 11 chr17 76597377 76597740 -12906813 - L2 LINE L2 -4 3309 2838 1028 249 72 14 chr17 76597826 76598171 -12906382 + MLT1A1 LTR MaLR 1 365 0 217 288 0 0 chr17 76598207 76598287 -12906266 + (TA)n Simple_repeat Simple_repeat 2 81 0 213 65 0 0 chr17 76598289 76598320 -12906233 + (TC)n Simple_repeat Simple_repeat 1 31 0 208 151 57 0 chr17 76598367 76598420 -12906133 + (TA)n Simple_repeat Simple_repeat 1 56 0 2491 43 0 7 chr17 76598488 76598787 -12905766 - AluY SINE Alu -14 297 1 4305 196 4 27 chr17 76599526 76600454 -12904099 - L1MC1 LINE L1 -1 6332 5426 969 313 148 34 chr17 76600757 76601534 -12903019 + L2 LINE L2 1827 2692 -622 1811 181 0 22 chr17 76602340 76602655 -12901898 + AluJo SINE Alu 1 308 -4 735 325 89 20 chr17 76602717 76603293 -12901260 + L2 LINE L2 2691 3312 -1 2207 121 3 0 chr17 76603317 76603614 -12900939 - AluSx SINE Alu -14 298 1 401 189 0 63 chr17 76603674 76603769 -12900784 + MLT1B LTR MaLR 1 89 -301 942 179 6 142 chr17 76603986 76604311 -12900242 + MLT1B LTR MaLR 104 384 -6 2915 173 88 87 chr17 76604337 76604361 -12900192 - MER21B LTR ERV1 -18 845 823 2801 175 16 61 chr17 76604361 76605002 -12899551 + LTR9 LTR ERV1 1 612 0 2915 173 88 87 chr17 76605002 76605348 -12899205 - MER21B LTR ERV1 -40 823 479 2042 103 3 73 chr17 76605348 76605677 -12898876 + AluSx SINE Alu 1 306 -6 2915 173 88 87 chr17 76605677 76606149 -12898404 - MER21B LTR ERV1 -384 479 1 3169 156 27 13 chr17 76606363 76606965 -12897588 - L1MB3 LINE L1 -4 6179 5570 262 260 10 83 chr17 76607106 76607202 -12897351 - MIR SINE MIR -166 96 8 2294 97 0 7 chr17 76607495 76607793 -12896760 - AluSg SINE Alu -14 296 1 1407 136 82 11 chr17 76607809 76608088 -12896465 - L1MA7 LINE L1 -10 6281 5983 22 35 0 0 chr17 76610458 76610487 -12894066 + AT_rich Low_complexity Low_complexity 1 29 0 228 312 156 11 chr17 76611518 76611704 -12892849 + L3 LINE CR1 244 456 -1121 1966 86 5 109 chr17 76613387 76613636 -12890917 + L1MA4A LINE L1 5940 6135 -168 1680 172 69 0 chr17 76613636 76613926 -12890627 + AluJb SINE Alu 1 310 -2 1966 86 5 109 chr17 76613926 76614070 -12890483 + L1MA4A LINE L1 6135 6292 -11 222 378 11 0 chr17 76615295 76615385 -12889168 + MIR3 SINE MIR 83 173 -35 1886 148 0 3 chr17 76616315 76616599 -12887954 + AluJo SINE Alu 1 283 -29 324 0 0 0 chr17 76616599 76616635 -12887918 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr17 76618477 76618512 -12886041 + AT_rich Low_complexity Low_complexity 1 35 0 234 62 0 0 chr17 76618654 76618686 -12885867 + (TG)n Simple_repeat Simple_repeat 1 32 0 186 167 0 0 chr17 76618936 76618972 -12885581 + T-rich Low_complexity Low_complexity 1 36 0 1053 96 17 11 chr17 76619389 76619567 -12884986 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1589 158 7 77 chr17 76619573 76619870 -12884683 - AluSx SINE Alu -36 276 1 423 358 0 7 chr17 76620642 76620779 -12883774 + MIR SINE MIR 9 139 -69 319 268 0 12 chr17 76620835 76620917 -12883636 + ERVL LTR ERVL 3764 3844 -1920 990 96 0 0 chr17 76620936 76621061 -12883492 + AluSq/x SINE Alu 1 125 -188 190 244 0 0 chr17 76621078 76621123 -12883430 + MIR SINE MIR 164 208 -54 2273 84 7 14 chr17 76621251 76621548 -12883005 - AluSp SINE Alu -18 295 1 3935 98 4 4 chr17 76621781 76622335 -12882218 + MER41A LTR ERV1 1 554 0 1241 339 71 43 chr17 76622604 76622728 -12881825 + ERVL LTR ERVL 3741 3860 -1904 2159 123 13 0 chr17 76622728 76623030 -12881523 + AluSq SINE Alu 1 306 -7 1241 339 71 43 chr17 76623030 76624151 -12880402 + ERVL LTR ERVL 3860 5020 -744 405 0 0 0 chr17 76624276 76624321 -12880232 + (CA)n Simple_repeat Simple_repeat 2 46 0 188 167 0 37 chr17 76624709 76624763 -12879790 + GA-rich Low_complexity Low_complexity 3 54 0 287 348 29 14 chr17 76625023 76625233 -12879320 - MLT1K LTR MaLR -10 578 366 1585 166 33 108 chr17 76625692 76626120 -12878433 + MSTD LTR MaLR 1 396 0 5592 254 65 36 chr17 76626123 76627551 -12877002 + MSTD-int LTR MaLR 3 1489 -246 2404 93 0 3 chr17 76627551 76627861 -12876692 + AluY SINE Alu 1 309 -2 5592 254 65 36 chr17 76627861 76628116 -12876437 + MSTD-int LTR MaLR 1489 1735 0 1615 203 67 3 chr17 76628116 76628476 -12876077 + MSTD LTR MaLR 1 383 -13 415 279 0 0 chr17 76628639 76628725 -12875828 - MER5A DNA MER1_type -102 87 2 212 224 17 17 chr17 76629180 76629238 -12875315 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 205 191 0 24 chr17 76629301 76629343 -12875210 + CT-rich Low_complexity Low_complexity 2 42 0 2747 141 0 9 chr17 76629688 76630120 -12874433 - MSTA LTR MaLR 0 428 1 765 265 45 33 chr17 76630670 76630915 -12873638 + MIR SINE MIR 15 262 0 744 224 99 15 chr17 76630924 76631073 -12873480 + MER20 DNA MER1_type 1 173 -46 243 61 0 0 chr17 76631073 76631106 -12873447 + (CCA)n Simple_repeat Simple_repeat 1 33 0 744 224 99 15 chr17 76631106 76631157 -12873396 + MER20 DNA MER1_type 173 218 -1 679 267 205 18 chr17 76631297 76631731 -12872822 - L1ME3A LINE L1 -14 6156 5642 382 323 138 44 chr17 76631981 76632343 -12872210 + L2 LINE L2 2857 3252 -61 39527 33 39 4 chr17 76632557 76638498 -12866055 - L1PA3 LINE L1 0 6155 1 583 259 21 64 chr17 76640139 76640375 -12864178 + MIR SINE MIR 1 226 -36 2062 140 45 22 chr17 76640375 76640731 -12863822 - THE1B LTR MaLR 0 364 1 1027 285 95 28 chr17 76640996 76641694 -12862859 + L2 LINE L2 2492 3240 -73 388 284 119 36 chr17 76641802 76641996 -12862557 - MIR SINE MIR -50 212 3 760 246 40 18 chr17 76643366 76643643 -12860910 - L1MD3 LINE L1 -1 7994 7712 2087 134 47 33 chr17 76643779 76644138 -12860415 - THE1B LTR MaLR 0 364 1 345 162 0 0 chr17 76645490 76645558 -12858995 + CT-rich Low_complexity Low_complexity 1 68 0 2300 101 3 0 chr17 76646448 76646755 -12857798 - AluSg SINE Alu -2 308 1 213 299 0 46 chr17 76646781 76646868 -12857685 - L2 LINE L2 -4 3268 3186 247 301 26 35 chr17 76647035 76647148 -12857405 + MLT1L LTR MaLR 88 199 -416 2180 137 0 3 chr17 76647419 76647725 -12856828 + AluSx SINE Alu 1 305 -7 342 338 114 22 chr17 76647751 76648068 -12856485 + MLT1J2 LTR MaLR 59 404 -46 1659 127 8 4 chr17 76648436 76648695 -12855858 - THE1B LTR MaLR 0 364 105 186 43 0 0 chr17 76648847 76648870 -12855683 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 744 177 82 6 chr17 76648874 76649032 -12855521 + MER45A DNA AcHobo 1 170 -8 231 241 24 0 chr17 76649412 76649495 -12855058 + (TA)n Simple_repeat Simple_repeat 2 86 0 23 33 0 0 chr17 76650424 76650454 -12854099 + AT_rich Low_complexity Low_complexity 1 30 0 353 316 41 51 chr17 76650865 76651061 -12853492 + MIR SINE MIR 7 200 -62 180 111 0 0 chr17 76652026 76652053 -12852500 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 29 0 0 0 chr17 76652227 76652256 -12852297 + AT_rich Low_complexity Low_complexity 1 29 0 2158 96 0 0 chr17 76654243 76654523 -12850030 + AluSc SINE Alu 1 280 -29 468 0 0 0 chr17 76654526 76654578 -12849975 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 491 327 23 28 chr17 76654586 76654803 -12849750 - MIR SINE MIR -44 218 3 2138 129 0 16 chr17 76654962 76655279 -12849274 - AluSx SINE Alu 0 312 1 263 155 0 39 chr17 76655598 76655701 -12848852 + (TAG)n Simple_repeat Simple_repeat 1 99 0 1830 197 46 84 chr17 76656249 76656773 -12847780 - MLT2B2 LTR ERVL -11 504 1 975 177 5 11 chr17 76656785 76656971 -12847582 + MER20 DNA MER1_type 35 219 0 23 0 0 0 chr17 76657227 76657250 -12847303 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 76657381 76657402 -12847151 + AT_rich Low_complexity Low_complexity 1 21 0 504 304 48 12 chr17 76658218 76658386 -12846167 + MIR3 SINE MIR 34 207 -1 203 264 55 22 chr17 76659792 76659883 -12844670 - MIR SINE MIR -72 136 43 333 41 0 0 chr17 76665473 76665522 -12839031 - L1PA4 LINE L1 0 6155 6107 1968 123 0 11 chr17 76665522 76665806 -12838747 - AluSc SINE Alu -28 281 1 843 156 23 0 chr17 76666001 76666129 -12838424 + FLAM_C SINE Alu 1 131 -12 510 299 62 16 chr17 76666411 76666605 -12837948 + MIR SINE MIR 50 252 -10 2010 146 50 22 chr17 76667521 76667884 -12836669 - THE1C LTR MaLR 0 375 3 9978 127 35 17 chr17 76667886 76669438 -12835115 - THE1C-int LTR MaLR 0 1580 1 265 341 55 28 chr17 76669649 76669831 -12834722 - MER20B DNA MER1_type -594 189 3 1001 332 39 18 chr17 76669944 76670546 -12834007 - MER115 DNA AcHobo -8 685 3 180 0 0 0 chr17 76671297 76671317 -12833236 + (A)n Simple_repeat Simple_repeat 1 20 0 509 250 11 71 chr17 76672497 76672524 -12832029 + MIR SINE MIR 3 30 -232 2246 104 7 0 chr17 76672524 76672821 -12831732 + AluSq SINE Alu 1 299 -14 2351 99 0 0 chr17 76672825 76673128 -12831425 + AluSg SINE Alu 1 303 -7 509 250 11 71 chr17 76673128 76673279 -12831274 + MIR SINE MIR 33 175 -87 186 361 34 25 chr17 76673279 76673398 -12831155 + MER5A DNA MER1_type 13 132 -57 798 204 107 15 chr17 76674031 76674227 -12830326 - MER20 DNA MER1_type -5 214 1 23 54 0 0 chr17 76674411 76674448 -12830105 + AT_rich Low_complexity Low_complexity 1 37 0 2027 126 0 24 chr17 76675059 76675353 -12829200 - AluSg SINE Alu -23 287 1 3984 83 13 0 chr17 76675396 76675941 -12828612 + L1PA10 LINE L1 5612 6163 -5 768 202 0 0 chr17 76676195 76676324 -12828229 + AluJb SINE Alu 129 257 -55 243 0 0 0 chr17 76676325 76676346 -12828207 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 0 0 0 chr17 76676346 76676373 -12828180 + (CA)n Simple_repeat Simple_repeat 2 28 0 61 15 0 0 chr17 76676406 76676474 -12828079 + AT_rich Low_complexity Low_complexity 1 68 0 247 311 239 0 chr17 76677022 76677202 -12827351 - MIR SINE MIR 0 262 40 1934 136 37 0 chr17 76677354 76677677 -12826876 + L1MC1 LINE L1 5994 6328 -5 2350 92 0 0 chr17 76678147 76678440 -12826113 + AluSg SINE Alu 1 293 -17 189 0 0 0 chr17 76680190 76680211 -12824342 + (TG)n Simple_repeat Simple_repeat 1 21 0 197 376 59 47 chr17 76680462 76680632 -12823921 + L3 LINE CR1 1293 1464 -113 21 0 0 0 chr17 76680882 76680903 -12823650 + AT_rich Low_complexity Low_complexity 1 21 0 2138 113 3 0 chr17 76681584 76681884 -12822669 - AluSx SINE Alu -11 301 1 844 214 7 0 chr17 76682288 76682469 -12822084 - AluJb SINE Alu 0 317 136 186 71 0 0 chr17 76682470 76682498 -12822055 + (TTG)n Simple_repeat Simple_repeat 2 29 0 208 333 73 68 chr17 76682798 76683032 -12821521 - MIR SINE MIR -5 257 23 369 245 119 95 chr17 76683808 76684019 -12820534 + MIR SINE MIR 39 262 0 1596 180 30 7 chr17 76684169 76684464 -12820089 + AluJb SINE Alu 1 302 -10 899 132 6 28 chr17 76684486 76684668 -12819885 + (GAAAA)n Simple_repeat Simple_repeat 3 180 0 308 107 67 13 chr17 76684762 76684837 -12819716 + GA-rich Low_complexity Low_complexity 4 82 0 242 342 72 13 chr17 76684997 76685149 -12819404 + MIR SINE MIR 53 213 -49 2358 86 3 0 chr17 76686411 76686713 -12817840 + AluY SINE Alu 1 303 -8 2242 111 0 0 chr17 76686855 76687162 -12817391 - AluSg SINE Alu -3 307 1 775 164 5 92 chr17 76687293 76687488 -12817065 + MER20 DNA MER1_type 42 219 0 228 184 0 0 chr17 76687546 76687595 -12816958 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 1714 175 3 10 chr17 76688094 76688397 -12816156 + AluJo SINE Alu 4 304 -8 220 259 74 56 chr17 76688460 76688568 -12815985 + L3 LINE CR1 343 452 -1125 21 0 0 0 chr17 76688580 76688601 -12815952 + AT_rich Low_complexity Low_complexity 1 21 0 323 309 123 38 chr17 76689198 76689434 -12815119 + MIR SINE MIR 7 262 0 740 65 0 0 chr17 76689528 76689620 -12814933 - AluY SINE Alu -178 133 42 1490 46 0 0 chr17 76689621 76689795 -12814758 + AluY SINE Alu 129 302 -9 201 74 0 0 chr17 76690237 76690264 -12814289 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 183 371 69 17 chr17 76691102 76691218 -12813335 + L2 LINE L2 3150 3271 -1 2339 95 0 3 chr17 76691792 76692098 -12812455 + AluSq SINE Alu 1 305 -8 1828 90 16 0 chr17 76692108 76692363 -12812190 + L1PA8 LINE L1 5912 6170 -2 242 316 0 0 chr17 76692438 76692514 -12812039 - Charlie8 DNA MER1_type -2244 173 98 1209 323 92 35 chr17 76692582 76693422 -12811131 + HAL1 LINE L1 18 905 -1602 1850 215 121 13 chr17 76693913 76694369 -12810184 - MLT1D LTR MaLR 0 505 1 1809 161 31 10 chr17 76694669 76694961 -12809592 - AluJb SINE Alu -13 299 2 2116 157 41 70 chr17 76695096 76695537 -12809016 - MSTA LTR MaLR 0 428 1 351 127 0 0 chr17 76697448 76697511 -12807042 + (TG)n Simple_repeat Simple_repeat 1 63 0 24 53 0 0 chr17 76697774 76697812 -12806741 + AT_rich Low_complexity Low_complexity 1 38 0 371 326 95 70 chr17 76698081 76698524 -12806029 - L2 LINE L2 -248 3065 2616 1143 217 41 3 chr17 76698559 76698854 -12805699 - MER33 DNA MER1_type -18 306 1 215 290 40 65 chr17 76698854 76698978 -12805575 - L2 LINE L2 -702 2612 2492 661 239 17 50 chr17 76699298 76699478 -12805075 - MER63A DNA MER1_type -2 208 35 24 0 0 0 chr17 76699956 76699980 -12804573 + AT_rich Low_complexity Low_complexity 1 24 0 232 139 0 0 chr17 76700230 76700273 -12804280 + MADE1 DNA Mariner 2 44 -36 2186 131 0 0 chr17 76700895 76701201 -12803352 + AluSg SINE Alu 1 306 -4 463 288 93 83 chr17 76701240 76701962 -12802591 + L1ME LINE L1 2435 3163 -2983 220 289 26 13 chr17 76701975 76702051 -12802502 - MIR SINE MIR 0 262 186 488 299 89 56 chr17 76702067 76702642 -12801911 + L1ME LINE L1 3171 3764 -2382 195 129 0 0 chr17 76702973 76703004 -12801549 + (CAA)n Simple_repeat Simple_repeat 3 33 0 456 261 62 56 chr17 76703220 76703320 -12801233 + L1ME LINE L1 5281 5379 -787 2542 68 0 0 chr17 76703320 76703630 -12800923 + AluY SINE Alu 1 310 -1 456 261 62 56 chr17 76703630 76703804 -12800749 + L1ME LINE L1 5379 5531 -635 423 0 0 0 chr17 76706709 76706756 -12797797 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 387 0 0 chr17 76710219 76710294 -12794259 + L3 LINE CR1 1492 1566 -11 202 237 0 0 chr17 76710658 76710696 -12793857 - L3 LINE CR1 -8 1569 1532 1936 154 3 0 chr17 76711189 76711481 -12793072 + AluSx SINE Alu 4 296 -16 368 291 42 36 chr17 76712489 76712654 -12791899 + MIR3 SINE MIR 32 197 -11 192 125 0 0 chr17 76712660 76712692 -12791861 + (TTG)n Simple_repeat Simple_repeat 2 33 0 24 0 0 0 chr17 76714174 76714198 -12790355 + AT_rich Low_complexity Low_complexity 1 24 0 573 286 91 13 chr17 76714285 76714593 -12789960 - L1MC4a LINE L1 -1765 6043 5712 233 300 0 14 chr17 76714615 76714685 -12789868 - L1MC4a LINE L1 -2156 5652 5584 469 277 35 7 chr17 76714824 76714965 -12789588 - MER5A DNA MER1_type -24 165 21 25 65 0 0 chr17 76717685 76717731 -12786822 + AT_rich Low_complexity Low_complexity 1 46 0 249 233 82 0 chr17 76717979 76718052 -12786501 - L1MEd LINE L1 -4880 1239 1161 886 45 0 0 chr17 76718133 76718243 -12786310 - L1PA5 LINE L1 -2 6152 6043 213 211 0 0 chr17 76718256 76718294 -12786259 + CT-rich Low_complexity Low_complexity 4 41 0 324 337 174 23 chr17 76718515 76718779 -12785774 - L1MEd LINE L1 -5658 461 158 252 100 0 0 chr17 76720448 76720488 -12784065 + (T)n Simple_repeat Simple_repeat 1 40 0 334 281 36 29 chr17 76722113 76722252 -12782301 + MLT1J LTR MaLR 1 140 -371 241 239 66 108 chr17 76722412 76722579 -12781974 + MLT1J LTR MaLR 300 459 -52 255 378 56 22 chr17 76722865 76723045 -12781508 + MIR SINE MIR 22 207 -55 2214 110 7 7 chr17 76723309 76723619 -12780934 + AluSq SINE Alu 1 310 -3 35 24 0 0 chr17 76723654 76723696 -12780857 + AT_rich Low_complexity Low_complexity 1 42 0 377 284 28 0 chr17 76724030 76724139 -12780414 + MIR SINE MIR 150 261 -1 211 0 0 81 chr17 76725761 76725798 -12778755 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 243 0 0 0 chr17 76726615 76726642 -12777911 + (A)n Simple_repeat Simple_repeat 1 27 0 250 108 0 0 chr17 76727222 76727259 -12777294 - MER53 DNA DNA -152 37 1 323 23 23 0 chr17 76728131 76728175 -12776378 + (TA)n Simple_repeat Simple_repeat 1 45 0 246 62 0 0 chr17 76728178 76728210 -12776343 + (CA)n Simple_repeat Simple_repeat 1 32 0 255 141 22 0 chr17 76728936 76728987 -12775566 - MLT2C1 LTR ERVL -1 396 360 2119 195 22 5 chr17 76729018 76729434 -12775119 - MLT2C2 LTR ERVL -41 423 1 193 29 29 29 chr17 76729837 76729872 -12774681 + (CAA)n Simple_repeat Simple_repeat 2 36 0 481 215 192 0 chr17 76730097 76730227 -12774326 + MER5A DNA MER1_type 29 183 -6 240 143 0 0 chr17 76730530 76730572 -12773981 + (TG)n Simple_repeat Simple_repeat 2 43 0 403 143 60 6 chr17 76730952 76731120 -12773433 + (TA)n Simple_repeat Simple_repeat 1 177 0 843 79 0 0 chr17 76731295 76731409 -12773144 - L1P LINE L1 -869 5277 5164 3181 73 7 0 chr17 76731409 76731820 -12772733 + L1PA8 LINE L1 5744 6159 -13 439 268 80 0 chr17 76733464 76733576 -12770977 - MER94 DNA DNA -11 123 3 227 309 93 7 chr17 76733834 76733973 -12770580 + MARNA DNA Mariner 88 238 -348 334 343 71 21 chr17 76734089 76734229 -12770324 + L2 LINE L2 3118 3264 -8 292 293 238 14 chr17 76734513 76734660 -12769893 + MER5A DNA MER1_type 9 188 -1 647 35 0 11 chr17 76735707 76735794 -12768759 + L1MA1 LINE L1 6213 6298 -4 27 0 0 0 chr17 76735801 76735828 -12768725 + AT_rich Low_complexity Low_complexity 1 27 0 234 81 0 0 chr17 76736454 76736491 -12768062 + (T)n Simple_repeat Simple_repeat 1 37 0 1644 123 209 0 chr17 76736852 76737154 -12767399 + MER47A DNA MER2_type 2 366 0 351 319 0 8 chr17 76738913 76739032 -12765521 - LTR33 LTR ERVL -403 118 1 371 113 14 0 chr17 76739582 76739653 -12764900 + (TA)n Simple_repeat Simple_repeat 2 73 0 431 18 18 0 chr17 76739653 76739709 -12764844 + (CA)n Simple_repeat Simple_repeat 2 58 0 2134 109 0 20 chr17 76739953 76740255 -12764298 - AluSc SINE Alu -13 296 1 216 0 0 0 chr17 76740551 76740575 -12763978 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 297 191 143 184 chr17 76740688 76740808 -12763745 - MER5A DNA MER1_type 0 189 76 2069 81 21 51 chr17 76740808 76741142 -12763411 - L1PA13 LINE L1 -11 6152 5829 297 191 143 184 chr17 76741142 76741189 -12763364 - MER5A DNA MER1_type -113 76 29 360 0 0 0 chr17 76741236 76741276 -12763277 + (CA)n Simple_repeat Simple_repeat 1 40 0 296 100 0 40 chr17 76742688 76742738 -12761815 - MLT2C2 LTR ERVL 0 464 417 419 130 13 0 chr17 76742743 76742820 -12761733 + (TA)n Simple_repeat Simple_repeat 1 78 0 1641 218 87 41 chr17 76742821 76743280 -12761273 - MLT2B1 LTR ERVL -40 480 1 1834 138 81 35 chr17 76743484 76743832 -12760721 + THE1B LTR MaLR 1 364 0 358 277 0 0 chr17 76744042 76744136 -12760417 + MARNA DNA Mariner 179 272 -314 299 291 128 28 chr17 76744193 76744372 -12760181 + MARNA DNA Mariner 381 577 -9 195 42 0 0 chr17 76745730 76745754 -12758799 + (CA)n Simple_repeat Simple_repeat 2 25 0 423 0 0 0 chr17 76745836 76745883 -12758670 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 723 290 60 60 chr17 76746435 76746769 -12757784 - L2 LINE L2 0 3313 2980 2133 118 3 3 chr17 76747012 76747309 -12757244 - AluSc SINE Alu -12 297 1 306 0 0 0 chr17 76747689 76747723 -12756830 + (TG)n Simple_repeat Simple_repeat 2 35 0 240 313 239 0 chr17 76748119 76748253 -12756300 - MIR3 SINE MIR -6 202 37 189 224 0 153 chr17 76748830 76748915 -12755638 - L2 LINE L2 -497 2817 2746 648 316 65 8 chr17 76748981 76749228 -12755325 - MIR SINE MIR -1 261 1 227 164 30 45 chr17 76749995 76750062 -12754491 - HsTC2 DNA Tc2 -1830 68 3 2156 108 13 7 chr17 76751367 76751674 -12752879 - AluSg SINE Alu -1 309 1 2054 151 0 3 chr17 76752498 76752809 -12751744 - AluSx SINE Alu 0 312 3 279 315 74 37 chr17 76753157 76753319 -12751234 + MIR SINE MIR 65 232 -30 242 61 0 0 chr17 76753350 76753383 -12751170 - MADE1 DNA Mariner -1 79 47 610 260 13 19 chr17 76754560 76754714 -12749839 + MIR SINE MIR 108 260 -2 1787 148 24 7 chr17 76755682 76755973 -12748580 + AluSx SINE Alu 1 296 -16 42 0 0 0 chr17 76755973 76756015 -12748538 + AT_rich Low_complexity Low_complexity 1 42 0 2630 52 0 0 chr17 76757387 76757697 -12746856 + AluY SINE Alu 1 310 -1 2369 98 0 0 chr17 76758492 76758799 -12745754 + AluSc SINE Alu 1 307 -2 2400 68 0 0 chr17 76759895 76760205 -12744348 + L1PA8 LINE L1 5861 6170 -2 990 120 0 0 chr17 76760471 76760613 -12743940 - AluSg/x SINE Alu -7 305 164 2021 105 3 41 chr17 76761335 76761659 -12742894 + AluSq SINE Alu 3 315 0 799 235 23 32 chr17 76762528 76762749 -12741804 - MER20 DNA MER1_type 0 219 1 201 289 60 36 chr17 76763383 76763466 -12741087 + L2 LINE L2 3172 3256 -16 259 306 82 90 chr17 76764191 76764593 -12739960 + L2 LINE L2 2829 3227 -86 3864 227 93 12 chr17 76767684 76768983 -12735570 + Charlie1a DNA MER1_type 1 1455 0 235 215 63 89 chr17 76769732 76769811 -12734742 - MIR SINE MIR -72 190 114 1789 167 37 0 chr17 76769872 76770171 -12734382 - AluJo SINE Alu -2 310 1 189 0 0 0 chr17 76770289 76770310 -12734243 + (TTTC)n Simple_repeat Simple_repeat 4 24 0 2231 98 0 14 chr17 76770754 76771049 -12733504 + AluSx SINE Alu 1 291 -21 180 250 36 18 chr17 76771310 76771366 -12733187 + L2 LINE L2 2717 2773 -541 204 97 0 0 chr17 76771665 76771696 -12732857 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 193 404 73 0 chr17 76771836 76771945 -12732608 + L2 LINE L2 3197 3313 0 226 311 54 68 chr17 76772744 76772892 -12731661 - L2 LINE L2 -181 3091 2946 1950 109 10 27 chr17 76773196 76773489 -12731064 - AluSc SINE Alu -21 288 1 423 52 0 0 chr17 76774085 76774143 -12730410 + (CAT)n Simple_repeat Simple_repeat 3 60 0 656 260 46 10 chr17 76774194 76774390 -12730163 + MIR SINE MIR 59 261 -1 198 305 178 34 chr17 76775825 76775943 -12728610 + MIR SINE MIR 20 154 -108 2150 149 3 6 chr17 76775943 76776291 -12728262 - MER47A DNA MER2_type 0 366 20 1980 128 0 40 chr17 76776592 76776889 -12727664 + AluSx SINE Alu 1 285 -27 323 306 75 44 chr17 76777206 76777366 -12727187 - MIR SINE MIR -70 192 28 590 309 32 67 chr17 76777627 76777941 -12726612 - L2 LINE L2 0 3313 3011 1489 289 80 16 chr17 76777953 76778506 -12726047 - L2 LINE L2 -668 2646 2059 1870 159 0 3 chr17 76778679 76778969 -12725584 - AluJb SINE Alu -18 294 6 656 208 57 0 chr17 76779202 76779361 -12725192 + L1M3 LINE L1 5568 5735 -445 * 5733 148 39 11 chr17 76779359 76780750 -12723803 + L1MA8 LINE L1 4865 6288 -3 213 283 6 12 chr17 76780961 76781127 -12723426 + (TA)n Simple_repeat Simple_repeat 1 165 0 646 239 60 0 chr17 76781152 76781370 -12723183 - L1MC4 LINE L1 -132 7910 7680 336 24 0 0 chr17 76782213 76782254 -12722299 + (CA)n Simple_repeat Simple_repeat 2 42 0 552 56 0 0 chr17 76782301 76782373 -12722180 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 199 262 10 10 chr17 76782706 76782809 -12721744 + (TA)n Simple_repeat Simple_repeat 1 103 0 252 122 0 0 chr17 76783359 76783400 -12721153 + (TG)n Simple_repeat Simple_repeat 2 42 0 237 309 151 69 chr17 76783510 76783902 -12720651 + L2 LINE L2 2825 3248 -65 1786 151 3 17 chr17 76783991 76784283 -12720270 - AluJo SINE Alu 0 312 25 1089 304 80 15 chr17 76784290 76784750 -12719803 + LTR33 LTR ERVL 29 518 -3 1732 166 16 32 chr17 76785076 76785389 -12719164 - AluJo SINE Alu -2 310 3 291 304 135 20 chr17 76785519 76785667 -12718886 + MIR SINE MIR 92 256 -6 210 387 75 0 chr17 76786912 76787005 -12717548 + L2 LINE L2 3149 3248 -24 200 83 0 28 chr17 76787044 76787080 -12717473 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 1853 143 27 3 chr17 76787461 76787754 -12716799 + AluSx SINE Alu 1 300 -12 185 320 89 94 chr17 76787834 76788012 -12716541 + L2 LINE L2 2502 2679 -635 1503 191 64 0 chr17 76788012 76788294 -12716259 - AluJb SINE Alu -12 300 1 185 320 89 94 chr17 76788294 76788509 -12716044 + L2 LINE L2 2679 2893 -421 * 636 220 75 35 chr17 76788505 76788678 -12715875 - MER5A DNA MER1_type -7 182 3 255 283 21 69 chr17 76789070 76789215 -12715338 + LTR16C LTR ERVL 3 140 -351 1106 265 44 49 chr17 76789786 76790197 -12714356 + LTR16C LTR ERVL 77 485 -6 2226 116 0 0 chr17 76790458 76790761 -12713792 + AluSx SINE Alu 1 303 -9 274 229 0 0 chr17 76791560 76791608 -12712945 + L2 LINE L2 3252 3299 -14 3773 70 8 0 chr17 76794188 76794676 -12709877 - L1PA7 LINE L1 -3 6151 5660 1957 148 3 22 chr17 76795045 76795362 -12709191 - AluSx SINE Alu -1 311 1 180 377 31 25 chr17 76796050 76796209 -12708344 - L2 LINE L2 -831 2483 2324 22 0 0 0 chr17 76797618 76797640 -12706913 + AT_rich Low_complexity Low_complexity 1 22 0 851 250 15 10 chr17 76798377 76798577 -12705976 - MER58A DNA MER1_type -23 201 1 2282 101 0 3 chr17 76799326 76799633 -12704920 - AluSc SINE Alu -3 306 1 25 51 0 0 chr17 76799651 76799690 -12704863 + AT_rich Low_complexity Low_complexity 1 39 0 2632 65 0 9 chr17 76800743 76801084 -12703469 + L1PA6 LINE L1 5812 6149 -5 237 286 14 0 chr17 76801349 76801419 -12703134 - Charlie8 DNA MER1_type -2183 234 164 2200 127 0 0 chr17 76801650 76801957 -12702596 - AluSg SINE Alu -3 307 1 1145 232 48 71 chr17 76802065 76802461 -12702092 - MLT1B LTR MaLR 0 390 4 554 188 0 31 chr17 76802752 76802912 -12701641 + GA-rich Low_complexity Low_complexity 3 157 0 4882 133 57 18 chr17 76803021 76803859 -12700694 + L1PA16 LINE L1 5292 6162 -4 947 291 71 53 chr17 76804077 76804337 -12700216 + L1ME1 LINE L1 377 631 -5630 2101 136 3 0 chr17 76804337 76804638 -12699915 - AluSx SINE Alu -10 302 1 947 291 71 53 chr17 76804638 76806112 -12698441 + L1ME1 LINE L1 631 2157 -4104 * 1855 237 48 39 chr17 76806102 76806188 -12698365 + L1ME1 LINE L1 5448 5532 -568 2186 131 0 3 chr17 76806188 76806502 -12698051 + AluSq SINE Alu 1 313 0 1855 237 48 39 chr17 76806502 76807057 -12697496 + L1ME1 LINE L1 5532 6095 -5 198 71 0 0 chr17 76807103 76807131 -12697422 + (TG)n Simple_repeat Simple_repeat 1 28 0 180 77 0 0 chr17 76807975 76808001 -12696552 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 642 332 52 8 chr17 76808771 76809039 -12695514 - LTR33 LTR ERVL -230 291 12 258 294 22 0 chr17 76809354 76809446 -12695107 + GA-rich Low_complexity Low_complexity 1 94 0 201 381 8 40 chr17 76809683 76809809 -12694744 + L2 LINE L2 2203 2324 -990 301 313 9 35 chr17 76810197 76810312 -12694241 + L2 LINE L2 3200 3311 -2 277 333 20 20 chr17 76811609 76811708 -12692845 - MER5A DNA MER1_type -22 167 69 203 284 73 46 chr17 76811613 76811722 -12692831 + MER5B DNA MER1_type 27 138 -40 * 25 31 0 0 chr17 76811794 76811826 -12692727 + AT_rich Low_complexity Low_complexity 1 32 0 1158 37 0 0 chr17 76812509 76812645 -12691908 + AluY SINE Alu 158 293 -18 262 156 16 16 chr17 76812794 76812858 -12691695 + AluSp/q SINE Alu 240 303 0 2380 68 13 7 chr17 76812966 76813274 -12691279 + AluY SINE Alu 1 310 -1 477 50 0 0 chr17 76813286 76813346 -12691207 + (TTTC)n Simple_repeat Simple_repeat 1 60 0 337 402 61 4 chr17 76814355 76814584 -12689969 + L3 LINE CR1 427 668 -909 288 261 0 0 chr17 76814612 76814704 -12689849 + (CATA)n Simple_repeat Simple_repeat 3 94 0 286 319 81 27 chr17 76814727 76814912 -12689641 + L3 LINE CR1 680 874 -703 268 318 122 27 chr17 76814903 76815051 -12689502 + MIR3 SINE MIR 16 177 -31 * 472 293 47 21 chr17 76815097 76815305 -12689248 + MIR SINE MIR 19 234 -28 534 366 33 39 chr17 76815505 76815988 -12688565 + L3 LINE CR1 1096 1575 -2 1557 272 104 20 chr17 76816683 76817231 -12687322 + MLT1E LTR MaLR 1 593 0 1223 264 3 48 chr17 76817467 76817842 -12686711 - MLT2C1 LTR ERVL -2 395 38 204 339 0 0 chr17 76818535 76818591 -12685962 - L2 LINE L2 -18 3295 3240 308 203 57 57 chr17 76818815 76818938 -12685615 + L1MDa LINE L1 2032 2154 -4386 25 31 0 0 chr17 76819417 76819449 -12685104 + AT_rich Low_complexity Low_complexity 1 32 0 228 111 0 0 chr17 76819808 76819844 -12684709 + (TC)n Simple_repeat Simple_repeat 1 36 0 1210 181 28 4 chr17 76820239 76820570 -12683983 - MER57A LTR ERV1 -3 400 1 327 113 0 0 chr17 76820665 76820718 -12683835 + (CA)n Simple_repeat Simple_repeat 1 53 0 1996 152 0 0 chr17 76820764 76821053 -12683500 - AluSx SINE Alu -23 289 1 1939 103 0 4 chr17 76821241 76821494 -12683059 - AluSg SINE Alu -58 252 1 22 35 0 0 chr17 76821494 76821523 -12683030 + AT_rich Low_complexity Low_complexity 1 29 0 434 73 97 18 chr17 76821864 76822029 -12682524 + (TA)n Simple_repeat Simple_repeat 1 178 0 259 66 105 0 chr17 76822049 76822125 -12682428 + (TA)n Simple_repeat Simple_repeat 2 85 0 242 237 34 0 chr17 76822265 76822324 -12682229 + MLT1C LTR MaLR 407 467 0 244 292 0 14 chr17 76822440 76822512 -12682041 + L2 LINE L2 3193 3263 -50 181 317 168 36 chr17 76822678 76822845 -12681708 - L3 LINE CR1 -2 1575 1387 2028 132 59 34 chr17 76823891 76824246 -12680307 - THE1B LTR MaLR 0 364 1 840 250 18 23 chr17 76824650 76824870 -12679683 - MER20 DNA MER1_type 0 219 1 441 280 132 48 chr17 76825034 76825223 -12679330 + MIR SINE MIR 58 262 0 1743 160 0 33 chr17 76825430 76825736 -12678817 + AluJb SINE Alu 1 296 -16 198 338 0 14 chr17 76827408 76827479 -12677074 + L2 LINE L2 2988 3057 -215 2174 177 62 2 chr17 76827521 76827923 -12676630 - MSTB LTR MaLR 0 426 1 803 258 41 0 chr17 76828438 76828632 -12675921 - MIR SINE MIR -44 218 17 461 193 30 7 chr17 76831351 76831486 -12673067 + GA-rich Low_complexity Low_complexity 1 138 0 2442 89 0 6 chr17 76832479 76832792 -12671761 + AluSx SINE Alu 1 311 -1 365 229 115 76 chr17 76832895 76833052 -12671501 - MIR SINE MIR -61 201 39 1949 140 26 14 chr17 76833333 76833684 -12670869 - THE1C LTR MaLR -20 355 1 209 323 62 0 chr17 76834506 76834571 -12669982 + MIR SINE MIR 30 98 -110 281 291 20 20 chr17 76835212 76835360 -12669193 - MLT1K LTR MaLR -43 545 398 2287 78 0 0 chr17 76835502 76835818 -12668735 - AluY SINE Alu 0 316 1 808 247 5 0 chr17 76836152 76836346 -12668207 - MER3 DNA MER1_type -8 201 7 275 283 332 11 chr17 76836754 76836941 -12667612 + MIR SINE MIR 6 252 -10 1570 152 24 91 chr17 76836967 76837297 -12667256 + AluJb SINE Alu 4 311 -1 2137 162 28 14 chr17 76837493 76837852 -12666701 - THE1B LTR MaLR 0 364 1 659 303 101 47 chr17 76837937 76838413 -12666140 - L2 LINE L2 -75 3238 2742 951 246 27 17 chr17 76841161 76841462 -12663091 + L1MB7 LINE L1 5879 6182 -2 1551 244 17 17 chr17 76843451 76843857 -12660696 - MLT2D LTR ERVL -8 406 1 202 298 53 32 chr17 76845514 76845608 -12658945 - MIR SINE MIR -79 183 88 411 143 55 22 chr17 76845687 76845778 -12658775 + MER53 DNA DNA 2 95 -94 1947 115 26 4 chr17 76846329 76846599 -12657954 + AluSc SINE Alu 1 276 -33 22 0 0 0 chr17 76846843 76846865 -12657688 + AT_rich Low_complexity Low_complexity 1 22 0 381 75 0 0 chr17 76847990 76848043 -12656510 + (TG)n Simple_repeat Simple_repeat 2 54 0 399 92 13 26 chr17 76848072 76848148 -12656405 + (TA)n Simple_repeat Simple_repeat 1 75 0 290 254 14 14 chr17 76850597 76850668 -12653885 - MIR SINE MIR -115 147 77 465 34 0 0 chr17 76850800 76850859 -12653694 + (CA)n Simple_repeat Simple_repeat 2 60 0 1925 234 37 18 chr17 76851259 76851832 -12652721 - L1ME3A LINE L1 -5 6165 5582 2171 170 57 0 chr17 76851833 76852221 -12652332 + MSTB LTR MaLR 2 411 -15 355 266 16 54 chr17 76852228 76852303 -12652250 - L1ME3A LINE L1 -576 5590 5514 1999 124 52 0 chr17 76852303 76852594 -12651959 + AluSq SINE Alu 1 306 -7 355 266 16 54 chr17 76852594 76852702 -12651851 - L1ME3A LINE L1 -652 5514 5414 415 254 0 14 chr17 76852821 76852997 -12651556 - MER20 DNA MER1_type -8 211 1 815 51 5 9 chr17 76853194 76853313 -12651240 + L1PA3 LINE L1 6016 6155 0 387 0 0 0 chr17 76853597 76853640 -12650913 + (TG)n Simple_repeat Simple_repeat 2 44 0 2426 69 0 28 chr17 76853723 76854041 -12650512 + AluY SINE Alu 1 309 -2 495 262 61 24 chr17 76854083 76854247 -12650306 + MIR SINE MIR 28 197 -65 263 356 33 0 chr17 76854258 76854381 -12650172 - MIR SINE MIR -78 130 48 1610 127 106 7 chr17 76855740 76856015 -12648538 + AluSx SINE Alu 1 302 -10 370 303 82 0 chr17 76856306 76856428 -12648125 + MER5B DNA MER1_type 1 132 -46 21 0 0 0 chr17 76856550 76856571 -12647982 + AT_rich Low_complexity Low_complexity 1 21 0 2395 78 3 0 chr17 76856890 76857185 -12647368 - AluY SINE Alu -15 296 1 333 242 0 0 chr17 76857464 76857555 -12646998 + A-rich Low_complexity Low_complexity 1 91 0 773 232 11 11 chr17 76857748 76857929 -12646624 + MLT1B LTR MaLR 210 390 0 2353 137 37 5 chr17 76858004 76858435 -12646118 - LTR56 LTR ERV1 0 445 1 1326 177 83 178 chr17 76858499 76859286 -12645267 + LTR8A LTR ERV1 1 712 -15 430 266 115 86 chr17 76859729 76859973 -12644580 - MIR SINE MIR 0 262 12 1553 273 116 10 chr17 76860563 76861458 -12643095 - L1ME3A LINE L1 -6 6164 5039 2322 152 23 5 chr17 76861478 76861874 -12642679 + MER57A LTR ERV1 1 403 0 561 312 151 23 chr17 76861894 76862292 -12642261 - L1ME3A LINE L1 -1222 4924 4476 1618 108 31 8 chr17 76862294 76862552 -12642001 + L1PA13 LINE L1 5899 6162 -1 349 191 48 29 chr17 76862614 76862719 -12641834 - L1ME3A LINE L1 -1649 4497 4391 930 297 50 17 chr17 76863622 76864040 -12640513 + MER45B DNA AcHobo 7 438 -602 280 306 65 37 chr17 76864208 76864453 -12640100 - L1M4 LINE L1 -1209 5639 5388 240 354 12 6 chr17 76864472 76864633 -12639920 - L1M4 LINE L1 -2017 4831 4670 2015 130 17 0 chr17 76864894 76865186 -12639367 + AluSg SINE Alu 1 297 -13 1481 142 23 0 chr17 76866540 76866800 -12637753 + L1PA13 LINE L1 5896 6161 -2 2010 91 0 26 chr17 76866809 76867116 -12637437 - AluY SINE Alu -12 299 1 354 139 81 12 chr17 76868249 76868335 -12636218 + LTR18B LTR ERVL 517 608 -6 1403 216 75 18 chr17 76868388 76868786 -12635767 + MLT1D LTR MaLR 72 492 -13 297 290 0 0 chr17 76869850 76869919 -12634634 + HAL1 LINE L1 13 81 -2426 1536 195 75 18 chr17 76870470 76870870 -12633683 - MLT1D LTR MaLR -11 494 72 648 127 83 38 chr17 76870917 76871074 -12633479 - LTR18B LTR ERVL -2 612 449 763 80 213 0 chr17 76871174 76871324 -12633229 - MSTA LTR MaLR -245 183 2 1499 225 82 37 chr17 76871689 76872177 -12632376 - MER67D LTR ERV1 -4 510 1 304 255 159 35 chr17 76872550 76872695 -12631858 - LTR50 LTR ERVL -629 166 4 244 315 28 12 chr17 76873399 76873484 -12631069 - MER5A DNA MER1_type 0 189 91 264 277 17 34 chr17 76873695 76873814 -12630739 - MLT1J2 LTR MaLR -1 449 333 252 59 0 0 chr17 76873877 76873911 -12630642 + (CA)n Simple_repeat Simple_repeat 1 34 0 2980 92 5 0 chr17 76874056 76874490 -12630063 + L1P LINE L1 1 436 -5710 609 284 117 23 chr17 76874614 76875128 -12629425 - L1M4 LINE L1 -3430 3418 2857 628 358 42 18 chr17 76875369 76875755 -12628798 - L1M4 LINE L1 -4359 2490 2096 372 256 30 30 chr17 76875910 76876078 -12628475 + HERVK22 LTR ERVK 4439 4606 -2231 622 156 26 0 chr17 77078904 77079137 -12425416 + (TG)n Simple_repeat Simple_repeat 1 239 0 2506 53 3 3 chr17 77079957 77080256 -12424297 + AluSg SINE Alu 1 299 -11 342 225 22 124 chr17 77081502 77081680 -12422873 - MIR3 SINE MIR -28 180 21 244 267 23 70 chr17 77082146 77082232 -12422321 - MIR3 SINE MIR -7 201 120 275 266 46 55 chr17 77082474 77082583 -12421970 + L3 LINE CR1 1465 1572 -5 1480 165 49 30 chr17 77082613 77082880 -12421673 + AluJb SINE Alu 1 272 -40 239 71 24 0 chr17 77082882 77082924 -12421629 + (GA)n Simple_repeat Simple_repeat 2 44 0 207 100 0 0 chr17 77083747 77083777 -12420776 + (TG)n Simple_repeat Simple_repeat 1 30 0 597 207 9 0 chr17 77084181 77084292 -12420261 - MER81 DNA DNA -1 113 2 1737 142 3 51 chr17 77085802 77086119 -12418434 - AluJb SINE Alu 0 304 2 2216 124 21 32 chr17 77087012 77087391 -12417162 - THE1C LTR MaLR 0 375 1 209 303 61 0 chr17 77087515 77087581 -12416972 - L2 LINE L2 -39 3274 3205 965 131 189 0 chr17 77087857 77087873 -12416680 + MER21A LTR ERV1 1 13 -918 441 0 0 0 chr17 77087873 77087922 -12416631 + (CA)n Simple_repeat Simple_repeat 2 50 0 965 131 189 0 chr17 77087922 77088127 -12416426 + MER21A LTR ERV1 13 264 -667 2620 139 106 19 chr17 77088132 77088644 -12415909 + MER21A LTR ERV1 376 931 0 1435 270 94 8 chr17 77089445 77090164 -12414389 - L1ME3A LINE L1 -219 6345 5433 2322 152 23 5 chr17 77090184 77090580 -12413973 + MER57A LTR ERV1 1 403 0 499 313 116 26 chr17 77090600 77090945 -12413608 - L1ME3A LINE L1 -1222 5318 4943 1618 108 31 8 chr17 77091000 77091258 -12413295 + L1PA13 LINE L1 5899 6162 -1 1061 270 116 31 chr17 77091320 77092388 -12412165 - L1ME3A LINE L1 -1649 4891 3733 279 268 8 31 chr17 77092456 77092583 -12411970 - L1ME3A LINE L1 -4565 1975 1852 220 283 0 0 chr17 77093107 77093160 -12411393 + (TATG)n Simple_repeat Simple_repeat 3 55 0 264 283 139 27 chr17 77093493 77093751 -12410802 + L1ME4a LINE L1 5636 5922 -199 2148 104 14 0 chr17 77093840 77094201 -12410352 + AluSq SINE Alu 1 365 0 23 0 0 0 chr17 77094202 77094225 -12410328 + AT_rich Low_complexity Low_complexity 1 23 0 301 333 25 8 chr17 77096044 77096164 -12408389 + L1ME LINE L1 5255 5376 -2432 1075 230 11 11 chr17 77096414 77096697 -12407856 + L1PB4 LINE L1 5873 6155 -1 395 339 177 34 chr17 77096934 77097380 -12407173 - L2 LINE L2 0 3313 2804 367 239 34 8 chr17 77097422 77097539 -12407014 + L1ME LINE L1 5544 5663 -458 29 28 0 0 chr17 77097790 77097826 -12406727 + AT_rich Low_complexity Low_complexity 1 36 0 1879 138 54 43 chr17 77098615 77098986 -12405567 - THE1C LTR MaLR 0 375 1 955 55 8 8 chr17 77103097 77103225 -12401328 - L1PA7 LINE L1 -1 6153 6026 234 0 0 0 chr17 77103349 77103375 -12401178 + (A)n Simple_repeat Simple_repeat 1 26 0 1324 241 47 22 chr17 77103682 77104047 -12400506 - MLT1A2 LTR MaLR 0 374 1 347 361 63 13 chr17 77105959 77106117 -12398436 + MIR SINE MIR 20 185 -77 857 247 87 36 chr17 77108358 77108750 -12395803 + L1MC4 LINE L1 7631 8042 0 1802 172 0 23 chr17 77108752 77109100 -12395453 + AluSx SINE Alu 1 312 0 282 269 23 47 chr17 77110180 77110351 -12394202 + T-rich Low_complexity Low_complexity 3 169 0 188 294 106 35 chr17 77111829 77111914 -12392639 + MIR SINE MIR 18 108 -100 2479 112 17 6 chr17 77112081 77112439 -12392114 - THE1B LTR MaLR 0 364 3 373 212 36 44 chr17 77113669 77113783 -12390770 + MLT1D LTR MaLR 1 115 -390 356 202 40 2 chr17 77113786 77113879 -12390674 + MLT1E2 LTR MaLR 372 609 0 2090 124 3 0 chr17 77114117 77114399 -12390154 - AluSq SINE Alu -20 293 11 303 303 150 20 chr17 77114479 77115245 -12389308 - L1M4 LINE L1 -786 5360 4495 285 200 87 43 chr17 77115298 77115413 -12389140 - L1M4 LINE L1 -1795 4351 4232 2284 76 3 13 chr17 77115892 77116193 -12388360 - AluY SINE Alu -9 302 5 1972 124 11 0 chr17 77116764 77117038 -12387515 + AluSq SINE Alu 1 277 -36 180 0 0 0 chr17 77117040 77117060 -12387493 + (TC)n Simple_repeat Simple_repeat 1 20 0 966 103 0 0 chr17 77117061 77117326 -12387227 + (TA)n Simple_repeat Simple_repeat 1 265 0 351 289 0 0 chr17 77117339 77117429 -12387124 + L1MC4 LINE L1 6614 6703 -1339 276 155 0 0 chr17 77117429 77117500 -12387053 + (TA)n Simple_repeat Simple_repeat 1 71 0 235 264 66 0 chr17 77117509 77117615 -12386938 - L1MC4 LINE L1 -1316 6726 6614 1158 105 0 7 chr17 77117616 77118226 -12386327 + (TA)n Simple_repeat Simple_repeat 1 606 0 1039 127 0 18 chr17 77118252 77118417 -12386136 + L1PA16 LINE L1 5981 6142 -24 241 253 95 21 chr17 77119968 77120063 -12384490 - MLT1I LTR MaLR 0 409 308 3086 128 0 6 chr17 77120189 77120666 -12383887 + L1PA16 LINE L1 5693 6166 0 229 125 36 0 chr17 77121867 77121923 -12382630 + (TG)n Simple_repeat Simple_repeat 2 59 0 221 289 0 53 chr17 77124681 77124757 -12379796 + L2 LINE L2 3242 3313 0 399 287 78 12 chr17 77124818 77124985 -12379568 + MIR SINE MIR 60 237 -25 231 239 0 0 chr17 77124991 77125058 -12379495 + GA-rich Low_complexity Low_complexity 2 68 0 2007 129 27 51 chr17 77125198 77125571 -12378982 + THE1B LTR MaLR 1 364 0 10754 94 14 25 chr17 77125571 77126414 -12378139 + THE1B-int LTR MaLR 1 819 -761 2128 24 0 12 chr17 77126414 77126668 -12377885 + L1PA3 LINE L1 5905 6155 0 10754 94 14 25 chr17 77126668 77127422 -12377131 + THE1B-int LTR MaLR 819 1580 0 1781 123 20 52 chr17 77127428 77127777 -12376776 + THE1B LTR MaLR 7 344 -20 22 0 0 0 chr17 77128090 77128112 -12376441 + AT_rich Low_complexity Low_complexity 1 22 0 1963 128 3 16 chr17 77130615 77130919 -12373634 - AluSx SINE Alu 0 312 13 1764 205 8 11 chr17 77130971 77131337 -12373216 - MLT1A1 LTR MaLR 0 365 1 1895 180 138 48 chr17 77131389 77131495 -12373058 + MLT1D LTR MaLR 1 96 -409 2140 133 0 0 chr17 77131495 77131788 -12372765 + AluSx SINE Alu 3 295 -17 1895 180 138 48 chr17 77131788 77132143 -12372410 + MLT1D LTR MaLR 96 504 -1 2019 149 3 0 chr17 77132252 77132554 -12371999 + AluJb SINE Alu 9 311 -1 200 125 0 25 chr17 77133007 77133047 -12371506 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 873 285 71 76 chr17 77133411 77133442 -12371111 + L1ME1 LINE L1 55 85 -6311 1429 199 46 49 chr17 77133442 77133808 -12370745 + MLT1A1 LTR MaLR 1 365 0 873 285 71 76 chr17 77133808 77134105 -12370448 + L1ME1 LINE L1 85 382 -6014 1628 203 68 11 chr17 77134105 77134459 -12370094 + MLT1A2 LTR MaLR 1 374 0 873 285 71 76 chr17 77134459 77135020 -12369533 + L1ME1 LINE L1 382 940 -5456 620 272 43 26 chr17 77135052 77135398 -12369155 + L1ME1 LINE L1 2927 3278 -2937 233 316 0 0 chr17 77135434 77135491 -12369062 + polypurine Low_complexity Low_complexity 3 59 0 895 251 23 27 chr17 77135491 77135790 -12368763 + L1ME1 LINE L1 3313 3610 -2605 387 304 82 31 chr17 77135794 77135988 -12368565 + MLT1G LTR MaLR 3 206 -389 719 256 106 9 chr17 77136053 77136280 -12368273 + MLT1G LTR MaLR 342 590 0 3169 239 87 39 chr17 77136310 77137278 -12367275 + L1ME1 LINE L1 3872 4792 -1443 2212 124 30 19 chr17 77137278 77137649 -12366904 - THE1C LTR MaLR 0 375 1 3169 239 87 39 chr17 77137649 77138931 -12365622 + L1ME1 LINE L1 4792 6221 -14 733 113 0 0 chr17 77141681 77141787 -12362766 + L1MB5 LINE L1 6061 6166 -8 180 77 0 0 chr17 77142081 77142107 -12362446 + (TTG)n Simple_repeat Simple_repeat 2 27 0 327 292 97 56 chr17 77142152 77142368 -12362185 + MIR SINE MIR 37 261 -1 270 0 0 0 chr17 77142651 77142681 -12361872 + (A)n Simple_repeat Simple_repeat 1 30 0 818 245 25 5 chr17 77142846 77143050 -12361503 - L1ME1 LINE L1 -5 6161 5954 874 277 57 7 chr17 77143091 77143373 -12361180 + MER58B DNA MER1_type 30 325 -16 1180 254 28 0 chr17 77143375 77143698 -12360855 - L1ME1 LINE L1 -247 5917 5586 304 236 34 0 chr17 77143881 77143970 -12360583 - L1MA9 LINE L1 -40 6272 6181 861 202 60 11 chr17 77144129 77144312 -12360241 - MER58C DNA MER1_type -15 200 9 225 241 17 0 chr17 77144492 77144550 -12360003 - MER63 DNA MER1_type -25 1036 978 255 266 124 35 chr17 77144553 77144613 -12359940 - MER63 DNA MER1_type -87 749 696 2080 139 0 3 chr17 77144613 77144908 -12359645 - AluJb SINE Alu -17 295 2 255 266 124 35 chr17 77144908 77144960 -12359593 - MER63 DNA MER1_type -140 696 1 465 222 122 44 chr17 77145435 77145615 -12358938 + MER58C DNA MER1_type 21 214 -1 2268 123 85 15 chr17 77145680 77146078 -12358475 - MSTA LTR MaLR -2 426 1 357 292 139 38 chr17 77147049 77147258 -12357295 - L2 LINE L2 -496 2818 2589 1125 238 65 31 chr17 77147487 77147840 -12356713 + MLT1A1 LTR MaLR 1 365 0 1357 307 12 21 chr17 77147949 77148379 -12356174 + LTR16B LTR ERVL 35 460 -4 769 271 126 98 chr17 77148449 77149094 -12355459 + HAL1 LINE L1 63 725 -1782 1441 290 97 31 chr17 77149186 77150499 -12354054 + HAL1 LINE L1 894 2398 -109 29 28 0 0 chr17 77150923 77150959 -12353594 + AT_rich Low_complexity Low_complexity 1 36 0 573 56 93 0 chr17 77150959 77151121 -12353432 + (TA)n Simple_repeat Simple_repeat 1 177 0 23449 148 9 28 chr17 77151133 77156453 -12348100 + L1PA10 LINE L1 952 6163 -5 537 71 0 0 chr17 77157368 77157438 -12347115 - L1PA6 LINE L1 -209 5945 5876 587 74 0 0 chr17 77157439 77157520 -12347033 + L1PA5 LINE L1 6073 6153 -1 24 0 0 0 chr17 77157667 77157691 -12346862 + AT_rich Low_complexity Low_complexity 1 24 0 1843 168 7 3 chr17 77158083 77158381 -12346172 + AluSx SINE Alu 1 299 -13 407 299 156 37 chr17 77160009 77160383 -12344170 + MLT1L LTR MaLR 110 601 -14 437 289 46 20 chr17 77160515 77160712 -12343841 + MLT1L LTR MaLR 368 569 -46 1490 221 127 79 chr17 77160722 77161228 -12343325 + MLT1H LTR MaLR 1 530 -19 230 319 96 0 chr17 77161322 77161416 -12343137 - L2 LINE L2 -543 2771 2669 1839 174 0 16 chr17 77161463 77161768 -12342785 + AluJb SINE Alu 2 301 -11 778 237 35 23 chr17 77161939 77162112 -12342441 + MER5A DNA MER1_type 6 180 -9 283 95 10 43 chr17 77162465 77162510 -12342043 - THE1C LTR MaLR 0 428 383 1249 102 22 249 chr17 77162510 77162911 -12341642 + AluSx SINE Alu 1 310 -2 1359 154 47 29 chr17 77162931 77163236 -12341317 - THE1C LTR MaLR -28 347 3 1581 184 3 35 chr17 77163424 77163450 -12341103 - AluJo SINE Alu -6 306 281 180 0 0 0 chr17 77163450 77163470 -12341083 + (CGAG)n Simple_repeat Simple_repeat 2 21 0 1581 184 3 35 chr17 77163470 77163759 -12340794 - AluJo SINE Alu -31 281 1 3312 51 26 0 chr17 77163827 77164257 -12340296 - L1PA3 LINE L1 -3 6152 5712 368 246 8 75 chr17 77164828 77164962 -12339591 + MIR SINE MIR 113 237 -25 243 0 0 0 chr17 77165848 77165875 -12338678 + (A)n Simple_repeat Simple_repeat 1 27 0 426 290 147 56 chr17 77166476 77166980 -12337573 + L1MEd LINE L1 679 1228 -4891 22 56 0 0 chr17 77169154 77169190 -12335363 + AT_rich Low_complexity Low_complexity 1 36 0 350 344 113 16 chr17 77169572 77169883 -12334670 - L3 LINE CR1 -1121 456 116 2458 53 0 20 chr17 77170529 77170833 -12333720 + AluY SINE Alu 3 300 -11 207 114 0 0 chr17 77170875 77170910 -12333643 + (TC)n Simple_repeat Simple_repeat 1 35 0 558 269 27 43 chr17 77171446 77171632 -12332921 - MER58A DNA MER1_type 0 224 42 371 301 36 0 chr17 77171630 77171713 -12332840 - MER58A DNA MER1_type -21 86 1 * 1855 130 0 83 chr17 77172419 77172757 -12331796 - AluSx SINE Alu -2 310 1 1682 130 0 0 chr17 77173261 77173513 -12331040 - AluSg SINE Alu 0 305 54 228 122 0 0 chr17 77174205 77174246 -12330307 + (CAT)n Simple_repeat Simple_repeat 2 42 0 309 329 161 0 chr17 77174642 77174791 -12329762 + MIR SINE MIR 90 262 0 543 220 0 25 chr17 77175136 77175254 -12329299 - MER63 DNA MER1_type -317 745 5 533 321 91 33 chr17 77175261 77175591 -12328962 + MLT1J2 LTR MaLR 62 410 -40 21 57 0 0 chr17 77176341 77176376 -12328177 + AT_rich Low_complexity Low_complexity 1 35 0 277 242 145 110 chr17 77178528 77178755 -12325798 - MIR SINE MIR -8 254 20 3232 281 77 27 chr17 77179278 77181035 -12323518 + L1M4 LINE L1 2475 4319 -1827 180 0 0 0 chr17 77181221 77181241 -12323312 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 384 119 0 0 chr17 77181240 77181299 -12323254 + (TA)n Simple_repeat Simple_repeat 1 59 0 527 267 72 24 chr17 77182146 77182424 -12322129 - MIR SINE MIR 0 262 1 237 83 0 0 chr17 77182737 77182773 -12321780 + (CA)n Simple_repeat Simple_repeat 2 37 0 198 361 32 51 chr17 77183042 77183200 -12321353 - L3b LINE CR1 -26 1557 1403 378 42 0 0 chr17 77183473 77183521 -12321032 + (CA)n Simple_repeat Simple_repeat 1 48 0 272 348 0 57 chr17 77183591 77183732 -12320821 + MER5A DNA MER1_type 7 139 -50 816 278 107 27 chr17 77183754 77184092 -12320461 + MER83B LTR ERV1 1 365 -13 1604 148 48 26 chr17 77184106 77184377 -12320176 - AluJb SINE Alu -35 277 1 2241 105 0 0 chr17 77185168 77185462 -12319091 - AluSx SINE Alu -18 294 1 411 189 242 8 chr17 77185718 77185850 -12318703 + L1MA10 LINE L1 6169 6331 -3 827 206 101 0 chr17 77186346 77186535 -12318018 + MER3 DNA MER1_type 2 209 0 1660 204 0 3 chr17 77187221 77187530 -12317023 + AluJo SINE Alu 3 310 -2 223 344 88 16 chr17 77188930 77189055 -12315498 - MER5A DNA MER1_type -6 183 50 1009 296 70 17 chr17 77189391 77189806 -12314747 - LTR16A LTR ERVL -13 437 1 21 0 0 0 chr17 77191149 77191170 -12313383 + AT_rich Low_complexity Low_complexity 1 21 0 2096 117 0 7 chr17 77191472 77191762 -12312791 + AluSx SINE Alu 9 296 -16 23 33 0 0 chr17 77192043 77192073 -12312480 + AT_rich Low_complexity Low_complexity 1 30 0 1454 314 159 21 chr17 77192133 77193193 -12311360 + L2 LINE L2 1733 2939 -375 2566 99 8 0 chr17 77193197 77193561 -12310992 - L1PB1 LINE L1 0 6151 5785 405 95 74 7 chr17 77193561 77193709 -12310844 + (TA)n Simple_repeat Simple_repeat 1 158 0 38 61 0 0 chr17 77193709 77193775 -12310778 + AT_rich Low_complexity Low_complexity 1 66 0 420 73 73 26 chr17 77193776 77193927 -12310626 + (TA)n Simple_repeat Simple_repeat 1 158 0 599 74 37 0 chr17 77193927 77194008 -12310545 + L1PB1 LINE L1 5782 5865 -286 2397 75 0 3 chr17 77194118 77194440 -12310113 - L1PB1 LINE L1 -371 5780 5460 756 283 188 3 chr17 77194440 77194769 -12309784 + L2 LINE L2 2924 3313 0 412 271 33 0 chr17 77195288 77195410 -12309143 + MER46C DNA MER2_type 77 202 -136 481 253 74 21 chr17 77195589 77195779 -12308774 - L1MC4a LINE L1 -1903 5905 5706 313 305 38 15 chr17 77195944 77196075 -12308478 - L1MC4a LINE L1 -875 5271 5138 29 28 0 0 chr17 77196082 77196118 -12308435 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr17 77196685 77196718 -12307835 + AT_rich Low_complexity Low_complexity 1 33 0 2238 98 3 7 chr17 77197126 77197423 -12307130 + AluSc SINE Alu 1 296 -13 2570 108 3 3 chr17 77198012 77198374 -12306179 - THE1B LTR MaLR 0 364 3 2033 125 28 0 chr17 77199608 77199897 -12304656 + AluSx SINE Alu 1 297 -15 960 197 106 4 chr17 77202460 77202734 -12301819 - MER33 DNA MER1_type -22 302 1 423 334 125 33 chr17 77202734 77203174 -12301379 - L2 LINE L2 -52 3261 2782 237 229 95 29 chr17 77203375 77203480 -12301073 + L1M4b LINE L1 1322 1433 -5426 275 269 23 64 chr17 77203663 77203882 -12300671 + L1M4b LINE L1 1765 1974 -4973 244 189 40 14 chr17 77204224 77204298 -12300255 + L1ME1 LINE L1 5790 5865 -256 1063 304 34 28 chr17 77204325 77204855 -12299698 + L1MEc LINE L1 202 734 -5829 2240 71 0 7 chr17 77204887 77205195 -12299358 + AluY SINE Alu 1 306 0 329 200 74 30 chr17 77205196 77205331 -12299222 + L1MEc LINE L1 1107 1247 -5316 4029 178 75 68 chr17 77205333 77205754 -12298799 + L1MC3 LINE L1 6703 7120 -665 235 259 0 0 chr17 77205754 77205812 -12298741 + MLT1F1 LTR MaLR 68 125 -442 4029 178 75 68 chr17 77205812 77206384 -12298169 + L1MC3 LINE L1 7120 7760 -25 2104 127 0 0 chr17 77206407 77206706 -12297847 - AluSq SINE Alu -14 299 1 253 250 58 0 chr17 77206740 77206844 -12297709 + L1MEc LINE L1 1230 1339 -5224 403 310 70 43 chr17 77206869 77207198 -12297355 + L1MEc LINE L1 1265 1602 -4782 590 216 0 0 chr17 77207369 77207480 -12297073 + MLT1A1 LTR MaLR 1 111 -254 513 204 0 0 chr17 77207481 77207579 -12296974 - MLT2B1 LTR ERVL -420 100 3 1114 152 46 28 chr17 77207579 77207796 -12296757 - ERVL-B1 LTR ERVL -4 5760 5540 1229 249 42 12 chr17 77207796 77208205 -12296348 + L1M4 LINE L1 3840 4260 -1886 668 236 48 14 chr17 77208231 77208481 -12296072 + L1ME1 LINE L1 5917 6177 -1 4588 24 2 4 chr17 77209774 77210317 -12294236 + L1PA2 LINE L1 5613 6154 -1 188 355 45 0 chr17 77210627 77210737 -12293816 + MIR SINE MIR 148 262 0 202 118 29 0 chr17 77211196 77211230 -12293323 + (TG)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr17 77211481 77211509 -12293044 + AT_rich Low_complexity Low_complexity 1 28 0 1702 83 5 0 chr17 77211921 77212139 -12292414 + AluY SINE Alu 72 290 -21 1624 176 17 20 chr17 77212921 77213217 -12291336 - AluJo SINE Alu -17 295 1 2822 10 0 0 chr17 77213615 77213922 -12290631 + AluYa5 SINE Alu 1 307 -4 4706 67 3 13 chr17 77214773 77215400 -12289153 - L1PA5 LINE L1 -1 6153 5533 267 348 43 9 chr17 77216048 77216163 -12288390 + MIR3 SINE MIR 58 176 -32 27 29 0 0 chr17 77216453 77216487 -12288066 + AT_rich Low_complexity Low_complexity 1 34 0 272 214 0 67 chr17 77216506 77216595 -12287958 - L1MB8 LINE L1 0 6178 6096 2683 181 78 99 chr17 77216644 77217507 -12287046 - L1MB8 LINE L1 -77 6101 5267 1062 132 103 24 chr17 77217507 77217720 -12286833 + MER30 DNA MER1_type 1 230 0 2683 181 78 99 chr17 77217720 77217775 -12286778 - L1MB8 LINE L1 -911 5267 5212 189 213 0 0 chr17 77220171 77220218 -12284335 + A-rich Low_complexity Low_complexity 3 49 0 274 116 0 0 chr17 77220479 77220522 -12284031 - MADE1 DNA Mariner -37 43 1 195 163 0 93 chr17 77220552 77220595 -12283958 - L2 LINE L2 -6 3307 3269 255 318 196 28 chr17 77221189 77221368 -12283185 - MIR SINE MIR -34 228 20 287 248 128 59 chr17 77221837 77222014 -12282539 + MIR3 SINE MIR 5 193 -15 262 207 0 17 chr17 77222225 77222283 -12282270 + (TG)n Simple_repeat Simple_repeat 2 58 0 217 377 71 29 chr17 77222998 77223348 -12281205 + L2 LINE L2 2404 2768 -546 1691 48 0 0 chr17 77223582 77223790 -12280763 + L1P3 LINE L1 5568 5775 -397 387 324 92 14 chr17 77223867 77224009 -12280544 - MIR SINE MIR -89 173 21 306 342 86 26 chr17 77224172 77224555 -12279998 + L2 LINE L2 1789 2194 -1120 368 225 12 12 chr17 77225333 77225413 -12279140 + L1M4b LINE L1 11 90 -6769 1933 291 67 12 chr17 77225431 77226030 -12278523 + L1M4b LINE L1 147 778 -6081 2156 239 80 85 chr17 77226115 77227686 -12276867 + L1M4b LINE L1 927 2480 -4479 3440 241 65 47 chr17 77227788 77227951 -12276602 + L1M4b LINE L1 2473 2631 -4326 243 0 0 0 chr17 77227951 77227978 -12276575 + (CA)n Simple_repeat Simple_repeat 2 28 0 3440 241 65 47 chr17 77227978 77229450 -12275103 + L1M4b LINE L1 2631 4095 -2862 21 0 0 0 chr17 77230067 77230088 -12274465 + AT_rich Low_complexity Low_complexity 1 21 0 359 232 50 10 chr17 77230425 77230524 -12274029 - MIR SINE MIR -128 134 32 199 297 0 40 chr17 77231538 77231612 -12272941 + MIR SINE MIR 54 124 -84 463 238 7 70 chr17 77232018 77232161 -12272392 + L1ME3A LINE L1 5506 5639 -531 409 254 24 8 chr17 77232139 77232265 -12272288 + L1ME3A LINE L1 6034 6161 -9 * 429 303 17 45 chr17 77232342 77232381 -12272172 - MIR SINE MIR -56 206 167 1393 210 47 96 chr17 77232381 77232594 -12271959 + MLT1C LTR MaLR 1 223 -244 2189 84 44 0 chr17 77232594 77232891 -12271662 + AluY SINE Alu 1 310 -1 1393 210 47 96 chr17 77232891 77233168 -12271385 + MLT1C LTR MaLR 223 467 0 429 303 17 45 chr17 77233168 77233306 -12271247 - MIR SINE MIR -95 167 34 2015 132 3 0 chr17 77233320 77233615 -12270938 + AluSq SINE Alu 1 296 -17 22 0 0 0 chr17 77233616 77233638 -12270915 + AT_rich Low_complexity Low_complexity 1 22 0 227 315 14 0 chr17 77233955 77234028 -12270525 + MLT1K LTR MaLR 179 252 -336 22 0 0 0 chr17 77235350 77235372 -12269181 + AT_rich Low_complexity Low_complexity 1 22 0 230 178 0 22 chr17 77235461 77235506 -12269047 + GA-rich Low_complexity Low_complexity 4 47 0 328 139 25 13 chr17 77236202 77236281 -12268272 + CT-rich Low_complexity Low_complexity 1 80 0 2668 168 16 10 chr17 77236298 77236829 -12267724 - L1MB3 LINE L1 -7 6176 5651 1890 120 50 0 chr17 77236829 77237129 -12267424 - L1PA16 LINE L1 -1 6165 5851 2668 168 16 10 chr17 77237129 77237299 -12267254 - L1MB3 LINE L1 -532 5651 5483 2323 103 0 3 chr17 77238076 77238388 -12266165 - AluSp SINE Alu -2 311 1 2611 122 36 0 chr17 77238663 77239074 -12265479 + MSTA LTR MaLR 1 426 -2 440 304 63 5 chr17 77239473 77239658 -12264895 - MIR SINE MIR -13 249 53 967 272 91 3 chr17 77239775 77240073 -12264480 + MER58B DNA MER1_type 4 327 -14 818 247 91 0 chr17 77241090 77241333 -12263220 + L2 LINE L2 3048 3312 -1 2048 118 3 3 chr17 77241354 77241642 -12262911 + AluSq SINE Alu 1 288 -25 203 326 174 53 chr17 77242397 77242849 -12261704 + L2 LINE L2 2137 2533 -781 772 288 24 0 chr17 77242849 77243054 -12261499 - MER63A DNA MER1_type 0 210 1 203 326 174 53 chr17 77243054 77243350 -12261203 + L2 LINE L2 2533 2975 -339 216 0 0 0 chr17 77243662 77243686 -12260867 + (TA)n Simple_repeat Simple_repeat 2 25 0 387 0 0 0 chr17 77243985 77244028 -12260525 + (TG)n Simple_repeat Simple_repeat 2 44 0 434 179 11 21 chr17 77246022 77246117 -12258436 - MIR SINE MIR 0 262 169 315 252 48 19 chr17 77246176 77246279 -12258274 + MLT1L LTR MaLR 157 262 -353 489 327 13 0 chr17 77246574 77246733 -12257820 - MIR SINE MIR -99 163 3 2182 136 0 0 chr17 77247509 77247818 -12256735 + AluSx SINE Alu 4 312 0 427 213 28 19 chr17 77248355 77248402 -12256151 + MER94 DNA DNA 7 52 -82 2200 188 8 57 chr17 77248402 77248913 -12255640 + MER66B LTR ERV1 1 486 0 427 213 28 19 chr17 77248913 77248973 -12255580 + MER94 DNA DNA 52 115 -19 286 292 70 70 chr17 77249427 77249612 -12254941 - MLT1K LTR MaLR -89 499 315 183 156 0 0 chr17 77249657 77249689 -12254864 + CT-rich Low_complexity Low_complexity 1 32 0 257 324 108 0 chr17 77249776 77249887 -12254666 - MLT1K LTR MaLR -399 189 67 4033 146 38 5 chr17 77250351 77251068 -12253485 + L1PB3 LINE L1 5057 5849 -317 357 24 0 0 chr17 77251068 77251110 -12253443 + (CA)n Simple_repeat Simple_repeat 2 43 0 4033 146 38 5 chr17 77251110 77251439 -12253114 + L1PB3 LINE L1 5849 6166 0 2172 118 3 3 chr17 77251615 77251919 -12252634 + AluSx SINE Alu 1 304 -8 288 301 209 13 chr17 77253613 77253766 -12250787 - MIR3 SINE MIR -12 196 14 602 240 70 43 chr17 77254367 77254625 -12249928 - L1MC4 LINE L1 0 8042 7778 255 314 207 0 chr17 77254917 77255057 -12249496 - L2 LINE L2 -225 3047 2879 212 356 89 52 chr17 77255117 77255308 -12249245 - L2 LINE L2 -441 2873 2676 2509 195 29 7 chr17 77256569 77257104 -12247449 - L1ME3 LINE L1 -1 6305 5781 311 326 0 0 chr17 77257110 77257199 -12247354 + L1MC4 LINE L1 6614 6702 -1340 952 134 30 13 chr17 77257224 77257267 -12247286 - L1MC4 LINE L1 -549 5785 5744 193 56 28 28 chr17 77257267 77257303 -12247250 + (TA)n Simple_repeat Simple_repeat 2 37 0 952 134 30 13 chr17 77257303 77257456 -12247097 - L1MC4 LINE L1 -590 5744 5627 292 315 42 21 chr17 77257719 77257862 -12246691 + MIR3 SINE MIR 60 205 -3 453 333 60 26 chr17 77258922 77259156 -12245397 + MIR SINE MIR 19 260 -2 269 348 75 6 chr17 77259521 77259682 -12244871 + MIR SINE MIR 77 248 -14 353 267 80 20 chr17 77259944 77260094 -12244459 - L1ME LINE L1 -5255 815 698 267 31 0 0 chr17 77260241 77260273 -12244280 + (TG)n Simple_repeat Simple_repeat 1 32 0 975 267 55 87 chr17 77260476 77260793 -12243760 - L1ME LINE L1 -5611 459 160 2310 83 7 0 chr17 77260793 77261083 -12243470 + AluSq SINE Alu 1 292 -21 975 267 55 87 chr17 77261083 77261237 -12243316 - L1ME LINE L1 -5910 160 3 248 340 107 0 chr17 77261485 77261588 -12242965 - MIR SINE MIR -109 153 40 186 71 0 0 chr17 77261630 77261658 -12242895 + (GA)n Simple_repeat Simple_repeat 2 29 0 437 264 85 0 chr17 77263259 77263388 -12241165 + MIR SINE MIR 7 146 -116 628 132 38 0 chr17 77263402 77263508 -12241045 + AluSg/x SINE Alu 187 296 -14 181 275 130 61 chr17 77263638 77263769 -12240784 + MIR SINE MIR 62 201 -61 24 85 0 0 chr17 77264033 77264092 -12240461 + AT_rich Low_complexity Low_complexity 1 59 0 180 111 0 0 chr17 77264130 77264157 -12240396 + (TAA)n Simple_repeat Simple_repeat 3 29 0 316 320 76 25 chr17 77264164 77264361 -12240192 - MIR SINE MIR -8 254 48 2657 48 0 0 chr17 77264458 77264767 -12239786 + AluY SINE Alu 1 309 -2 1877 175 37 26 chr17 77264899 77265276 -12239277 + MLT1B LTR MaLR 10 390 0 295 94 50 67 chr17 77266905 77267085 -12237468 + (TTATA)n Simple_repeat Simple_repeat 3 179 0 233 144 79 14 chr17 77267167 77267306 -12237247 + (TA)n Simple_repeat Simple_repeat 2 149 0 210 137 95 0 chr17 77267381 77267476 -12237077 + (TA)n Simple_repeat Simple_repeat 2 105 0 420 306 162 13 chr17 77267476 77267923 -12236630 - L2 LINE L2 -157 3156 2646 234 0 0 0 chr17 77268260 77268286 -12236267 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 261 333 26 17 chr17 77268873 77268990 -12235563 - MIR SINE MIR -114 148 31 1338 219 13 41 chr17 77270568 77270883 -12233670 - AluJb SINE Alu -4 308 3 1998 133 106 3 chr17 77271967 77272297 -12232256 - THE1B LTR MaLR 0 364 1 790 300 58 21 chr17 77273141 77273571 -12230982 - MLT1L LTR MaLR -4 611 166 180 154 31 138 chr17 77275308 77275373 -12229180 - L2 LINE L2 -2820 494 437 2207 117 0 16 chr17 77275634 77275943 -12228610 - AluSx SINE Alu -8 304 1 1424 98 5 0 chr17 77275984 77276189 -12228364 + L1MA3 LINE L1 5638 5843 -462 1894 126 80 0 chr17 77276198 77276484 -12228069 - AluSq SINE Alu -4 309 1 1843 164 0 0 chr17 77277433 77277714 -12226839 + AluJo SINE Alu 10 309 0 193 40 0 0 chr17 77277714 77277739 -12226814 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 210 37 0 0 chr17 77277947 77277974 -12226579 + (CA)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr17 77279031 77279055 -12225498 + AT_rich Low_complexity Low_complexity 1 24 0 2098 120 10 17 chr17 77279456 77279756 -12224797 - AluSx SINE Alu -14 298 1 260 176 103 15 chr17 77280690 77280758 -12223795 + MLT1J2 LTR MaLR 333 406 -44 2222 144 23 3 chr17 77281453 77281806 -12222747 + THE1B LTR MaLR 1 360 -4 180 0 0 0 chr17 77281947 77281967 -12222586 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2632 112 0 6 chr17 77282516 77282882 -12221671 + THE1B LTR MaLR 1 364 0 411 277 91 36 chr17 77282965 77283157 -12221396 + HAL1b LINE L1 769 986 -362 732 192 72 6 chr17 77283157 77283324 -12221229 - MER5B DNA MER1_type 0 178 1 411 277 91 36 chr17 77283324 77283438 -12221115 + HAL1b LINE L1 986 1092 -256 303 28 0 0 chr17 77284198 77284234 -12220319 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 94 0 0 chr17 77284234 77284266 -12220287 + (GA)n Simple_repeat Simple_repeat 1 32 0 999 189 18 32 chr17 77284414 77284631 -12219922 - MER20 DNA MER1_type -5 214 1 29 0 0 0 chr17 77284797 77284826 -12219727 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr17 77286510 77286533 -12218020 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1361 279 25 12 chr17 77288055 77288457 -12216096 - MLT2F LTR ERVL -58 605 199 12735 129 24 55 chr17 77288478 77290080 -12214473 + Tigger1 DNA MER2_type 38 1689 -729 2085 82 0 11 chr17 77290080 77290359 -12214194 + AluY SINE Alu 35 310 -1 12735 129 24 55 chr17 77290359 77290875 -12213678 + Tigger1 DNA MER2_type 1689 2070 -348 2133 116 6 10 chr17 77290875 77291186 -12213367 + AluSg SINE Alu 1 310 0 12735 129 24 55 chr17 77291186 77291525 -12213028 + Tigger1 DNA MER2_type 2070 2418 0 312 174 83 139 chr17 77291536 77291625 -12212928 - MLT2F LTR ERVL -518 145 65 858 168 10 46 chr17 77291625 77291708 -12212845 - MER53 DNA DNA 0 189 105 2193 103 7 0 chr17 77291708 77292016 -12212537 + AluSx SINE Alu 2 311 0 858 168 10 46 chr17 77292016 77292127 -12212426 - MER53 DNA DNA -84 105 1 312 174 83 139 chr17 77292127 77292181 -12212372 - MLT2F LTR ERVL -598 65 10 222 333 39 47 chr17 77292414 77292543 -12212010 + MER5B DNA MER1_type 9 136 -53 1922 146 7 0 chr17 77292610 77292918 -12211635 + AluSx SINE Alu 1 310 0 307 148 19 0 chr17 77293089 77293143 -12211410 - THE1B LTR MaLR 0 364 310 306 303 0 0 chr17 77293152 77293241 -12211312 + L1MC4 LINE L1 6615 6703 -1339 42 0 0 0 chr17 77293248 77293290 -12211263 + AT_rich Low_complexity Low_complexity 1 42 0 320 214 6 0 chr17 77293290 77293463 -12211090 + (TA)n Simple_repeat Simple_repeat 2 175 0 30 27 0 0 chr17 77293468 77293505 -12211048 + AT_rich Low_complexity Low_complexity 1 37 0 357 189 11 11 chr17 77293506 77293686 -12210867 + (TA)n Simple_repeat Simple_repeat 1 180 0 1618 151 43 33 chr17 77293687 77293986 -12210567 - THE1B LTR MaLR -62 302 1 293 279 118 53 chr17 77294353 77294573 -12209980 - MIR SINE MIR 0 262 18 2106 126 0 19 chr17 77294997 77295314 -12209239 + AluSx SINE Alu 1 311 -1 1261 85 30 50 chr17 77295434 77295634 -12208919 + MER107 DNA MER1_type 1 196 -1 2204 144 55 36 chr17 77297162 77297578 -12206975 - MSTA LTR MaLR -4 424 1 2432 81 0 0 chr17 77297751 77298046 -12206507 + AluSc SINE Alu 3 297 -12 852 279 92 55 chr17 77298114 77298515 -12206038 - L2 LINE L2 0 3313 2898 2430 76 0 0 chr17 77298552 77298853 -12205700 - AluY SINE Alu -10 301 1 334 282 29 10 chr17 77299145 77299248 -12205305 + MIR SINE MIR 87 191 -71 389 315 178 5 chr17 77299274 77299487 -12205066 - MIR SINE MIR -1 261 12 213 65 0 0 chr17 77300219 77300250 -12204303 + (CA)n Simple_repeat Simple_repeat 1 31 0 1693 146 4 43 chr17 77300349 77300651 -12203902 + AluJo SINE Alu 17 307 0 1548 207 10 94 chr17 77302248 77302736 -12201817 + MLT2B1 LTR ERVL 1 447 -73 314 311 0 0 chr17 77302765 77302855 -12201698 + L1MC4 LINE L1 6614 6703 -1339 230 89 44 0 chr17 77302863 77302908 -12201645 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 479 305 115 22 chr17 77303686 77303912 -12200641 + MIR SINE MIR 3 249 -13 2341 110 16 46 chr17 77304273 77304646 -12199907 - THE1B LTR MaLR -2 362 1 232 259 12 47 chr17 77304680 77304765 -12199788 + GA-rich Low_complexity Low_complexity 5 86 0 596 250 199 53 chr17 77304935 77305495 -12199058 + L2 LINE L2 2686 3305 -8 201 281 0 0 chr17 77305531 77305627 -12198926 + GA-rich Low_complexity Low_complexity 12 107 0 2596 121 0 3 chr17 77305631 77305996 -12198557 + THE1B LTR MaLR 1 364 0 460 355 42 9 chr17 77306313 77306530 -12198023 - MIR SINE MIR -7 255 32 364 267 32 49 chr17 77307417 77307610 -12196943 - MIR SINE MIR -32 230 36 2205 111 19 10 chr17 77307782 77308089 -12196464 + AluSx SINE Alu 3 312 0 312 272 59 21 chr17 77309406 77309538 -12195015 + MIR SINE MIR 22 167 -95 272 327 161 12 chr17 77310707 77310875 -12193678 + MIR SINE MIR 59 251 -11 25 0 0 0 chr17 77310961 77310986 -12193567 + AT_rich Low_complexity Low_complexity 1 25 0 298 308 57 92 chr17 77311508 77311735 -12192818 + MIR SINE MIR 28 246 -16 182 321 99 0 chr17 77311768 77311849 -12192704 + MIR SINE MIR 168 256 -6 218 330 57 19 chr17 77312442 77312548 -12192005 - MIR3 SINE MIR -86 122 13 298 351 81 70 chr17 77312765 77313024 -12191529 + L2 LINE L2 2999 3260 -12 22 35 0 0 chr17 77313520 77313549 -12191004 + AT_rich Low_complexity Low_complexity 1 29 0 1730 220 73 36 chr17 77314724 77315219 -12189334 - MLT2B1 LTR ERVL -7 513 1 226 83 0 28 chr17 77315558 77315594 -12188959 - MSTB LTR MaLR -3 423 389 * 232 175 53 0 chr17 77315591 77315648 -12188905 + MSTA LTR MaLR 318 377 -51 29 28 0 0 chr17 77315666 77315702 -12188851 + AT_rich Low_complexity Low_complexity 1 36 0 1561 147 170 11 chr17 77315702 77316049 -12188504 - MSTB LTR MaLR -24 402 1 413 209 73 9 chr17 77316155 77316265 -12188288 - MER94 DNA DNA -16 118 2 2179 289 15 33 chr17 77316569 77317299 -12187254 + L1PA16 LINE L1 11 727 -6060 14565 211 22 12 chr17 77317530 77319318 -12185235 + L1PA16 LINE L1 1223 2992 -3825 2659 43 0 0 chr17 77319318 77319623 -12184930 + AluY SINE Alu 1 305 -6 14565 211 22 12 chr17 77319623 77323330 -12181223 + L1PA16 LINE L1 2992 6817 0 696 237 48 83 chr17 77324312 77324540 -12180013 + MIR SINE MIR 28 247 -15 23 0 0 0 chr17 77324710 77324733 -12179820 + AT_rich Low_complexity Low_complexity 1 23 0 245 75 45 30 chr17 77325238 77325305 -12179248 + T-rich Low_complexity Low_complexity 3 70 0 2128 145 8 125 chr17 77326133 77326622 -12177931 + MSTB1 LTR MaLR 1 432 0 305 200 105 9 chr17 77326939 77327044 -12177509 - MLT1J2 LTR MaLR -30 420 306 246 283 0 0 chr17 77327110 77327170 -12177383 + GA-rich Low_complexity Low_complexity 1 60 0 750 270 142 9 chr17 77328499 77328829 -12175724 - LTR16B LTR ERVL -13 451 78 1483 211 54 0 chr17 77328900 77329180 -12175373 + AluJo SINE Alu 1 295 -17 189 107 0 0 chr17 77329207 77329235 -12175318 + (CATA)n Simple_repeat Simple_repeat 1 28 0 402 347 98 19 chr17 77329366 77329631 -12174922 - HAL1b LINE L1 -733 615 330 232 333 62 0 chr17 77330774 77330855 -12173698 - L2 LINE L2 0 3272 3187 340 283 9 0 chr17 77330929 77331035 -12173518 - MIR SINE MIR -103 159 53 2497 116 11 3 chr17 77331075 77331436 -12173117 - THE1B LTR MaLR 0 364 1 411 311 15 0 chr17 77331920 77332052 -12172501 - MER94 DNA DNA 0 134 1 212 375 73 0 chr17 77332468 77332564 -12171989 - L2 LINE L2 -194 3078 2976 944 233 55 87 chr17 77333532 77334005 -12170548 + MER39 LTR ERV1 250 707 0 220 262 49 0 chr17 77334410 77334471 -12170082 + MIR3 SINE MIR 135 198 -10 212 320 66 83 chr17 77334746 77334927 -12169626 - MIR SINE MIR -60 202 25 1984 105 55 71 chr17 77335160 77335541 -12169012 - THE1C LTR MaLR 0 375 1 298 247 22 0 chr17 77336497 77336586 -12167967 + (TA)n Simple_repeat Simple_repeat 1 91 0 315 254 49 99 chr17 77337814 77337956 -12166597 + MIR3 SINE MIR 66 200 -8 287 275 0 7 chr17 77339377 77339515 -12165038 + (CA)n Simple_repeat Simple_repeat 2 138 0 360 0 0 0 chr17 77340255 77340295 -12164258 + (A)n Simple_repeat Simple_repeat 1 40 0 709 185 185 42 chr17 77340938 77341127 -12163426 + MER20 DNA MER1_type 4 219 0 2149 120 27 0 chr17 77341489 77341788 -12162765 + AluSx SINE Alu 1 307 -5 493 175 155 0 chr17 77341792 77341889 -12162664 + AluSc SINE Alu 140 251 -58 2179 95 34 7 chr17 77341889 77342185 -12162368 + AluSq SINE Alu 1 304 -9 309 221 15 15 chr17 77343190 77343258 -12161295 + MIR SINE MIR 30 97 -165 * 315 304 8 40 chr17 77343256 77343381 -12161172 + L2 LINE L2 3189 3309 -4 247 290 215 0 chr17 77343396 77343489 -12161064 + MIR SINE MIR 111 223 -39 290 284 69 17 chr17 77344535 77344651 -12159902 - L2 LINE L2 -1 3312 3191 1225 248 30 24 chr17 77344653 77344992 -12159561 - MER58B DNA MER1_type 0 341 1 1933 140 69 26 chr17 77345926 77346275 -12158278 - THE1B LTR MaLR 0 364 1 1438 146 0 0 chr17 77346743 77346949 -12157604 + AluSc SINE Alu 103 308 -1 242 344 10 21 chr17 77347645 77347741 -12156812 - MIR3 SINE MIR -110 98 4 2182 117 0 0 chr17 77348173 77348463 -12156090 + AluSx SINE Alu 1 290 -22 342 0 0 0 chr17 77348466 77348504 -12156049 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 297 0 0 0 chr17 77348912 77348945 -12155608 + (TG)n Simple_repeat Simple_repeat 2 34 0 220 244 0 0 chr17 77349305 77349350 -12155203 + (TA)n Simple_repeat Simple_repeat 1 45 0 21 95 0 0 chr17 77349608 77349671 -12154882 + AT_rich Low_complexity Low_complexity 1 63 0 2285 115 0 7 chr17 77351006 77351311 -12153242 + AluSx SINE Alu 1 303 -9 194 292 104 31 chr17 77351373 77351469 -12153084 - MIR SINE MIR 0 262 160 340 218 77 0 chr17 77351518 77351596 -12152957 + MLT1H LTR MaLR 1 84 -465 1852 167 9 0 chr17 77351616 77351946 -12152607 + MER93b LTR ERV1 39 371 -2 680 254 143 54 chr17 77351950 77352376 -12152177 + MLT1H LTR MaLR 86 549 0 195 197 13 145 chr17 77352382 77352458 -12152095 - MIR SINE MIR -188 74 9 2124 130 0 0 chr17 77352541 77352858 -12151695 - AluSq SINE Alu 0 317 1 317 272 74 0 chr17 77353459 77353540 -12151013 + L2 LINE L2 3193 3279 -34 314 320 24 8 chr17 77353630 77353755 -12150798 - MIR SINE MIR -116 146 20 392 344 73 32 chr17 77355812 77356059 -12148494 + L3 LINE CR1 1296 1552 -25 498 96 0 0 chr17 77356387 77356460 -12148093 + (TAGA)n Simple_repeat Simple_repeat 3 75 0 406 200 0 42 chr17 77356520 77356615 -12147938 - MIR SINE MIR -107 155 65 189 107 0 0 chr17 77356859 77356887 -12147666 + (T)n Simple_repeat Simple_repeat 1 28 0 389 250 133 7 chr17 77357719 77357924 -12146629 + MIR SINE MIR 3 260 -2 665 257 49 49 chr17 77359427 77359653 -12144900 - MIR SINE MIR -9 253 28 408 240 20 10 chr17 77359773 77359873 -12144680 + MIR SINE MIR 51 151 -111 773 206 0 0 chr17 77360089 77360225 -12144328 - FLAM_C SINE Alu -7 136 1 2141 133 141 5 chr17 77360381 77360758 -12143795 + MSTA LTR MaLR 1 428 0 191 114 29 0 chr17 77360946 77360981 -12143572 + CT-rich Low_complexity Low_complexity 1 36 0 340 252 109 22 chr17 77361770 77362000 -12142553 + L1MC4a LINE L1 5703 5952 -1856 297 265 12 0 chr17 77362012 77362095 -12142458 + (TA)n Simple_repeat Simple_repeat 1 84 0 2327 96 0 6 chr17 77362446 77362758 -12141795 - AluY SINE Alu -1 310 1 654 247 6 0 chr17 77362993 77363151 -12141402 - MSTD LTR MaLR -237 159 1 746 171 0 0 chr17 77363339 77363468 -12141085 + L1PB4 LINE L1 6028 6156 0 294 305 8 76 chr17 77364651 77364717 -12139836 - MIR SINE MIR -136 126 72 2895 10 0 0 chr17 77364717 77365031 -12139522 + AluYb8 SINE Alu 1 314 -4 294 305 8 76 chr17 77365031 77365095 -12139458 - MIR SINE MIR -190 72 5 3683 47 0 0 chr17 77365593 77366071 -12138482 + L1PA5 LINE L1 5695 6172 0 2742 17 0 0 chr17 77366220 77366522 -12138031 + AluYa5 SINE Alu 1 302 -9 289 323 15 62 chr17 77366538 77366668 -12137885 - L2 LINE L2 -1 3312 3189 1310 131 0 15 chr17 77367579 77367777 -12136776 - AluSx SINE Alu -3 307 113 832 110 0 0 chr17 77368085 77368194 -12136359 - AluSx SINE Alu -199 113 5 2001 123 7 10 chr17 77368209 77368502 -12136051 - AluSc SINE Alu -17 292 1 2230 94 0 23 chr17 77369327 77369626 -12134927 - AluY SINE Alu -19 292 1 2335 114 0 0 chr17 77369627 77369933 -12134620 - AluSx SINE Alu -5 307 2 324 328 45 15 chr17 77370067 77370201 -12134352 + MIR3 SINE MIR 58 195 -13 418 236 57 70 chr17 77370403 77370560 -12133993 - MLT1H LTR MaLR -16 533 379 1199 196 65 76 chr17 77370583 77370950 -12133603 + MLT1A1 LTR MaLR 3 365 0 2189 116 0 7 chr17 77370964 77371256 -12133297 - AluSg SINE Alu -20 290 1 243 212 0 0 chr17 77371368 77371453 -12133100 + (TA)n Simple_repeat Simple_repeat 2 86 0 2024 138 30 13 chr17 77371899 77372204 -12132349 + AluSg SINE Alu 1 310 0 497 319 88 9 chr17 77373199 77373415 -12131138 + MIR SINE MIR 30 262 0 280 384 14 32 chr17 77373706 77373922 -12130631 - L2 LINE L2 -92 3180 2969 186 103 0 0 chr17 77375311 77375340 -12129213 + (CA)n Simple_repeat Simple_repeat 2 30 0 196 362 92 24 chr17 77376012 77376219 -12128334 - L3b LINE CR1 -37 1546 1326 2251 122 0 0 chr17 77376551 77376862 -12127691 - AluSx SINE Alu -1 311 1 763 155 31 0 chr17 77376915 77377044 -12127509 + FLAM_C SINE Alu 1 133 0 856 230 124 5 chr17 77378138 77378347 -12126206 - MIR SINE MIR 0 262 29 195 206 82 68 chr17 77380595 77380668 -12123885 - MIR SINE MIR -58 204 131 2163 114 0 7 chr17 77380848 77381137 -12123416 - AluSq SINE Alu -26 287 1 268 327 51 19 chr17 77382342 77382498 -12122055 - MIR SINE MIR 0 262 102 831 227 178 40 chr17 77382500 77382821 -12121732 - MLT1A1 LTR MaLR 0 365 1 6912 94 13 7 chr17 77383153 77384224 -12120329 + L1MA2 LINE L1 5227 6304 0 2122 135 0 0 chr17 77384237 77384526 -12120027 + AluSx SINE Alu 1 289 -23 267 31 0 0 chr17 77384531 77384563 -12119990 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 867 259 24 31 chr17 77384572 77384861 -12119692 + L1MEc LINE L1 66 352 -6044 563 330 148 49 chr17 77384918 77385506 -12119047 - HAL1 LINE L1 -1438 1069 424 2644 45 3 0 chr17 77385776 77386085 -12118468 - AluY SINE Alu -1 310 1 279 284 14 0 chr17 77386327 77386401 -12118152 - MIR SINE MIR -110 152 78 206 256 146 0 chr17 77386406 77386488 -12118065 + MIR SINE MIR 159 252 -10 577 321 80 15 chr17 77386983 77387322 -12117231 + L1MEc LINE L1 58 418 -5978 917 201 37 70 chr17 77387359 77387522 -12117031 + L1ME2 LINE L1 5175 5342 -820 2035 105 16 40 chr17 77387522 77387826 -12116727 + AluSx SINE Alu 1 297 -15 917 201 37 70 chr17 77387826 77388060 -12116493 + L1ME2 LINE L1 5342 5551 -611 1527 253 78 9 chr17 77388238 77388763 -12115790 + L1ME2 LINE L1 5566 6126 -38 2584 87 31 6 chr17 77389119 77389474 -12115079 - THE1B LTR MaLR 0 364 1 612 303 32 56 chr17 77392139 77392423 -12112130 - L2 LINE L2 -519 2795 2519 2214 130 52 0 chr17 77393402 77393748 -12110805 + THE1B LTR MaLR 1 364 0 352 269 205 24 chr17 77393768 77394023 -12110530 + L1M4 LINE L1 3961 4259 -1887 273 399 45 13 chr17 77394419 77394690 -12109863 - L2 LINE L2 -298 3015 2729 214 309 118 46 chr17 77394862 77395014 -12109539 + MIR SINE MIR 2 164 -98 2149 102 3 3 chr17 77395178 77395616 -12108937 + AluSq SINE Alu 1 438 0 318 273 31 70 chr17 77395616 77395744 -12108809 - L2 LINE L2 -1020 2294 2172 1552 106 18 0 chr17 77395862 77396079 -12108474 + AluSg/x SINE Alu 81 301 -9 22 0 0 0 chr17 77396345 77396367 -12108186 + AT_rich Low_complexity Low_complexity 1 22 0 502 219 146 59 chr17 77396530 77396968 -12107585 - Charlie2 DNA MER1_type -139 2723 2248 756 253 0 16 chr17 77396968 77397158 -12107395 + MLT1E2 LTR MaLR 1 187 -439 1048 217 99 22 chr17 77397178 77397330 -12107223 - MLT1B LTR MaLR -52 338 199 246 32 0 0 chr17 77397330 77397361 -12107192 + (GA)n Simple_repeat Simple_repeat 2 32 0 1048 217 99 22 chr17 77397361 77397522 -12107031 - MLT1B LTR MaLR -191 199 1 2148 190 28 28 chr17 77397522 77397658 -12106895 - MLT1B-int LTR MaLR 0 1735 1600 2112 129 13 0 chr17 77397658 77397960 -12106593 + AluSx SINE Alu 1 306 -6 2148 190 28 28 chr17 77397960 77398292 -12106261 - MLT1B-int LTR MaLR -134 1601 1267 260 266 25 0 chr17 77398343 77398422 -12106131 - MLT1B-int LTR MaLR -969 766 686 1545 211 36 8 chr17 77398561 77398925 -12105628 - MLT1B-int LTR MaLR -646 725 352 776 238 10 15 chr17 77399095 77399297 -12105256 - MLT1B-int LTR MaLR -1013 358 158 210 71 0 0 chr17 77399682 77399710 -12104843 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 541 306 44 38 chr17 77399842 77400025 -12104528 + MIR3 SINE MIR 18 201 -7 35 0 0 0 chr17 77400480 77400515 -12104038 + AT_rich Low_complexity Low_complexity 1 35 0 183 42 0 0 chr17 77401293 77401317 -12103236 + (TG)n Simple_repeat Simple_repeat 1 24 0 * 297 0 0 0 chr17 77401316 77401349 -12103204 + (GA)n Simple_repeat Simple_repeat 1 33 0 2182 128 0 0 chr17 77401837 77402134 -12102419 + AluSx SINE Alu 5 301 -11 2283 96 0 0 chr17 77402517 77402819 -12101734 - AluY SINE Alu -7 304 3 226 278 0 41 chr17 77403027 77403124 -12101429 + GA-rich Low_complexity Low_complexity 1 93 0 2297 75 3 3 chr17 77403177 77403470 -12101083 - AluSc SINE Alu -16 293 1 1152 107 34 36 chr17 77404816 77405051 -12099502 + MER1B DNA MER1_type 59 333 0 325 293 33 103 chr17 77405771 77405938 -12098615 - L1ME LINE L1 -352 5818 5680 2253 106 0 6 chr17 77405938 77406249 -12098304 - AluSc SINE Alu 0 309 1 325 293 33 103 chr17 77406249 77406381 -12098172 - L1ME LINE L1 -490 5680 5540 398 274 82 88 chr17 77406549 77406903 -12097650 - L1MDa LINE L1 -4513 2027 1676 236 381 65 18 chr17 77407025 77407193 -12097360 + MIR3 SINE MIR 21 196 -12 550 263 251 0 chr17 77408768 77408939 -12095614 + MER20 DNA MER1_type 4 217 -2 31 0 0 0 chr17 77409378 77409409 -12095144 + AT_rich Low_complexity Low_complexity 1 31 0 458 96 14 0 chr17 77410233 77410306 -12094247 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 662 307 37 5 chr17 77411066 77411284 -12093269 - MIR SINE MIR -35 227 3 1243 195 148 8 chr17 77412155 77412412 -12092141 + AluJo SINE Alu 1 293 -9 2739 83 11 6 chr17 77413054 77413416 -12091137 - THE1B LTR MaLR 0 364 1 265 276 106 24 chr17 77413578 77413701 -12090852 - L2 LINE L2 0 3272 3140 2371 98 0 0 chr17 77413703 77414000 -12090553 + AluSc SINE Alu 1 297 -12 319 161 84 0 chr17 77414535 77414719 -12089834 + (TA)n Simple_repeat Simple_repeat 1 199 0 348 137 24 30 chr17 77414748 77414916 -12089637 + (TATAA)n Simple_repeat Simple_repeat 5 171 0 260 232 32 0 chr17 77414922 77415047 -12089506 + (TA)n Simple_repeat Simple_repeat 1 129 0 285 180 35 0 chr17 77415058 77415230 -12089323 + (TA)n Simple_repeat Simple_repeat 1 178 0 393 134 67 220 chr17 77415376 77415599 -12088954 - MER53 DNA DNA 0 189 1 2144 98 0 39 chr17 77415973 77416304 -12088249 + AluSx SINE Alu 1 319 0 1817 155 3 21 chr17 77417132 77417423 -12087130 - AluJo SINE Alu -26 286 1 317 241 21 92 chr17 77418185 77418326 -12086227 + MIR SINE MIR 86 216 -46 422 268 15 157 chr17 77418485 77418892 -12085661 + L2 LINE L2 2955 3303 -10 2113 153 27 0 chr17 77419310 77419682 -12084871 - MLT1B LTR MaLR -2 388 7 219 258 0 76 chr17 77420884 77420950 -12083603 + MIR3 SINE MIR 111 171 -37 2048 215 12 29 chr17 77421970 77422482 -12082071 - L1MB7 LINE L1 -204 5980 5478 222 222 22 0 chr17 77423468 77423513 -12081040 - L2 LINE L2 -6 3307 3262 515 135 104 0 chr17 77424470 77424566 -12079987 - MER53 DNA DNA -83 106 1 4820 127 25 17 chr17 77424598 77424615 -12079938 + MER4E LTR ERV1 1 16 -763 371 39 39 0 chr17 77424615 77424667 -12079886 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4820 127 25 17 chr17 77424667 77425422 -12079131 + MER4E LTR ERV1 16 779 0 1198 140 6 6 chr17 77425425 77425604 -12078949 - AluJo SINE Alu -114 198 20 790 196 137 15 chr17 77425923 77426127 -12078426 - MIR SINE MIR -3 259 31 371 247 11 11 chr17 77428320 77428413 -12076140 + (CAGAGA)n Simple_repeat Simple_repeat 2 94 0 220 303 13 13 chr17 77429637 77429713 -12074840 + GA-rich Low_complexity Low_complexity 3 78 0 2287 95 0 7 chr17 77429729 77430025 -12074528 + AluSc SINE Alu 1 294 -15 338 346 60 28 chr17 77430644 77430826 -12073727 - L2 LINE L2 -14 3258 3071 195 289 0 0 chr17 77431555 77431593 -12072960 - MIR SINE MIR -135 73 36 192 160 200 0 chr17 77432008 77432058 -12072495 - MIR3 SINE MIR -5 203 144 * 328 192 87 125 chr17 77432033 77432137 -12072416 - L3 LINE CR1 -97 1480 1381 318 351 0 0 chr17 77432329 77432423 -12072130 - L2 LINE L2 -3 3310 3217 427 309 96 44 chr17 77432470 77432719 -12071834 - MIR SINE MIR 0 262 1 2180 94 0 26 chr17 77432739 77433046 -12071507 + AluSx SINE Alu 1 299 -13 280 233 11 11 chr17 77433070 77433160 -12071393 + GA-rich Low_complexity Low_complexity 3 92 0 * 676 137 0 42 chr17 77433150 77433246 -12071307 + (GGAAA)n Simple_repeat Simple_repeat 4 92 -72 2295 83 7 0 chr17 77433246 77433547 -12071006 + AluY SINE Alu 9 311 0 676 137 0 42 chr17 77433547 77433618 -12070935 + (GGAAA)n Simple_repeat Simple_repeat 92 164 0 201 311 46 81 chr17 77433640 77433900 -12070653 - L2 LINE L2 -168 3104 2854 2373 91 3 0 chr17 77433982 77434280 -12070273 - AluSg SINE Alu -11 299 1 247 246 30 82 chr17 77434441 77434575 -12069978 + L1M4 LINE L1 4530 4656 -1490 244 309 68 6 chr17 77434809 77434971 -12069582 - L1M LINE L1 -2382 5426 5255 250 311 123 48 chr17 77436079 77436307 -12068246 - MIR SINE MIR 0 262 18 3096 76 0 13 chr17 77436714 77437108 -12067445 + MLT2A1 LTR ERVL 1 389 -55 324 48 0 0 chr17 77437108 77437150 -12067403 + (TA)n Simple_repeat Simple_repeat 1 42 0 242 143 20 0 chr17 77437215 77437264 -12067289 + (TA)n Simple_repeat Simple_repeat 1 50 0 303 266 0 43 chr17 77437267 77437361 -12067192 - L1MC4 LINE L1 -1339 6703 6614 247 82 122 0 chr17 77437369 77437418 -12067135 + MLT2A2 LTR ERVL 399 453 0 275 271 247 18 chr17 77437508 77437674 -12066879 + MIR SINE MIR 15 218 -44 1803 146 17 36 chr17 77439335 77439636 -12064917 - AluJo SINE Alu -17 295 1 190 302 71 24 chr17 77439795 77439921 -12064632 - L2 LINE L2 -268 3004 2873 1909 119 0 0 chr17 77440518 77440770 -12063783 - AluSx SINE Alu -2 310 59 2021 139 0 3 chr17 77440940 77441235 -12063318 + AluJb SINE Alu 1 294 -18 293 271 18 86 chr17 77441683 77441882 -12062671 - L1ME LINE L1 -322 5844 5668 246 371 113 0 chr17 77442058 77442209 -12062344 + MIR3 SINE MIR 13 180 -28 668 279 43 39 chr17 77442937 77443170 -12061383 - MIR SINE MIR 0 262 29 36 23 0 0 chr17 77443301 77443344 -12061209 + AT_rich Low_complexity Low_complexity 1 43 0 194 259 190 26 chr17 77443411 77443527 -12061026 - L2 LINE L2 -198 3074 2940 387 0 0 0 chr17 77445017 77445060 -12059493 + (TG)n Simple_repeat Simple_repeat 1 43 0 1579 176 35 16 chr17 77445091 77445309 -12059244 - L1MA9 LINE L1 0 6312 6085 4057 126 26 52 chr17 77445309 77445960 -12058593 - MER41B LTR ERV1 -1 634 1 1579 176 35 16 chr17 77445960 77446054 -12058499 - L1MA9 LINE L1 -227 6085 5994 236 289 12 15 chr17 77447629 77447803 -12056750 - MER106A DNA MER1_type -15 221 1 991 195 47 33 chr17 77447870 77448085 -12056468 - MER20 DNA MER1_type 0 219 2 232 262 0 0 chr17 77448094 77448136 -12056417 - L2 LINE L2 -60 3253 3212 21 0 0 0 chr17 77448209 77448230 -12056323 + AT_rich Low_complexity Low_complexity 1 21 0 600 170 0 0 chr17 77448879 77448973 -12055580 + FLAM_A SINE Alu 39 132 -10 2085 100 4 0 chr17 77449388 77449658 -12054895 + AluSg SINE Alu 29 299 -11 2250 96 0 0 chr17 77449690 77450008 -12054545 - AluSg SINE Alu 0 318 1 213 260 0 27 chr17 77450806 77450879 -12053674 + C-rich Low_complexity Low_complexity 2 72 0 1256 285 66 7 chr17 77451253 77451664 -12052889 + LTR16A LTR ERVL 16 450 0 1008 267 73 0 chr17 77451666 77451954 -12052599 + HERV16 LTR ERVL 3 311 -4685 183 42 0 0 chr17 77451954 77451978 -12052575 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2066 274 107 95 chr17 77452095 77452612 -12051941 + HERV16 LTR ERVL 474 983 -4013 2199 136 57 28 chr17 77452612 77452966 -12051587 + THE1B LTR MaLR 1 364 0 12731 88 6 2 chr17 77452966 77454539 -12050014 + THE1B-int LTR MaLR 1 1580 0 2202 132 47 50 chr17 77454539 77454902 -12049651 + THE1B LTR MaLR 1 362 -2 524 118 0 0 chr17 77454903 77454971 -12049582 - FLAM_A SINE Alu -28 114 47 2066 274 107 95 chr17 77454971 77455990 -12048563 + HERV16 LTR ERVL 983 2109 -2887 2317 163 84 3 chr17 77455990 77456382 -12048171 + MSTA LTR MaLR 1 424 -4 2066 274 107 95 chr17 77456382 77456608 -12047945 + HERV16 LTR ERVL 2109 2331 -2665 496 222 0 0 chr17 77456693 77456792 -12047761 + MER58 DNA MER1_type 2321 2419 -1 1685 286 33 33 chr17 77456798 77457049 -12047504 + HERV16 LTR ERVL 2334 2584 -2412 2390 103 0 0 chr17 77457049 77457360 -12047193 + AluY SINE Alu 1 311 0 1685 286 33 33 chr17 77457360 77457653 -12046900 + HERV16 LTR ERVL 2583 2878 -2118 240 342 26 32 chr17 77457869 77458024 -12046529 + MIR3 SINE MIR 30 183 -25 546 193 17 8 chr17 77458031 77458150 -12046403 - MER3 DNA MER1_type -8 201 82 23 54 0 0 chr17 77458152 77458189 -12046364 + AT_rich Low_complexity Low_complexity 1 37 0 356 234 13 0 chr17 77458231 77458308 -12046245 - MER3 DNA MER1_type -131 78 1 1618 132 169 83 chr17 77458531 77458880 -12045673 + MER4A LTR ERV1 261 639 -25 665 142 0 71 chr17 77458926 77459039 -12045514 - AluJb SINE Alu -77 235 131 474 216 0 10 chr17 77459040 77459168 -12045385 - FLAM_C SINE Alu 0 169 43 369 290 55 3 chr17 77459924 77460063 -12044490 + MIR SINE MIR 15 143 -65 29 0 0 0 chr17 77460182 77460211 -12044342 + AT_rich Low_complexity Low_complexity 1 29 0 853 238 0 0 chr17 77460212 77460363 -12044190 - FRAM SINE Alu -25 151 1 973 298 65 15 chr17 77460365 77460701 -12043852 + LTR16A LTR ERVL 70 422 -28 322 313 56 28 chr17 77461143 77461287 -12043266 + L2 LINE L2 3118 3265 -7 217 307 13 13 chr17 77461332 77461407 -12043146 + L3b LINE CR1 1287 1361 -222 3193 183 30 30 chr17 77461495 77461829 -12042724 + L1MB5 LINE L1 4830 5163 -1011 1299 169 64 71 chr17 77461829 77462125 -12042428 - AluJo SINE Alu -18 294 1 3193 183 30 30 chr17 77462125 77462791 -12041762 + L1MB5 LINE L1 5163 5825 -349 1969 120 232 6 chr17 77462791 77462984 -12041569 - MSTA LTR MaLR 0 428 280 498 33 0 0 chr17 77462984 77463044 -12041509 + (CA)n Simple_repeat Simple_repeat 2 61 0 1969 120 232 6 chr17 77463044 77463199 -12041354 - MSTA LTR MaLR -148 280 1 3193 183 30 30 chr17 77463199 77463314 -12041239 + L1MB5 LINE L1 5825 5939 -235 970 200 93 4 chr17 77463378 77463603 -12040950 + L1MB5 LINE L1 5922 6166 -8 491 275 88 81 chr17 77463773 77464170 -12040383 + MLT1I LTR MaLR 10 409 0 2284 80 6 19 chr17 77464805 77465119 -12039434 + AluY SINE Alu 2 311 0 573 291 30 43 chr17 77465315 77465449 -12039104 + MIR SINE MIR 31 162 -100 2615 45 7 0 chr17 77465449 77465758 -12038795 - AluY SINE Alu 0 311 1 573 291 30 43 chr17 77465758 77465857 -12038696 + MIR SINE MIR 162 261 -1 1204 129 160 62 chr17 77466048 77466099 -12038454 + MSTA LTR MaLR 148 193 -235 2193 86 6 42 chr17 77466099 77466412 -12038141 + AluSg SINE Alu 1 302 -8 1204 129 160 62 chr17 77466412 77466616 -12037937 + MSTA LTR MaLR 193 428 0 421 287 131 75 chr17 77466644 77466912 -12037641 - MLT1K LTR MaLR -304 284 2 285 228 99 20 chr17 77467281 77467382 -12037171 - MLT1L LTR MaLR -8 607 499 1762 174 3 3 chr17 77467423 77467711 -12036842 + AluJo SINE Alu 1 288 -24 464 125 68 0 chr17 77467899 77467987 -12036566 + MER53 DNA DNA 96 189 0 501 250 52 6 chr17 77468718 77468890 -12035663 - MER20B DNA MER1_type -10 773 594 2944 91 0 3 chr17 77469182 77469545 -12035008 - THE1B LTR MaLR -2 362 1 384 175 0 0 chr17 77469578 77469641 -12034912 + MER58 DNA MER1_type 2358 2420 0 349 179 84 32 chr17 77469642 77469737 -12034816 - MER45A DNA AcHobo 0 178 79 383 276 26 0 chr17 77469912 77470028 -12034525 - MER20B DNA MER1_type -312 471 353 2350 91 0 0 chr17 77470029 77470326 -12034227 + AluY SINE Alu 1 297 -14 356 175 29 10 chr17 77470327 77470430 -12034123 + (TA)n Simple_repeat Simple_repeat 2 106 0 827 321 43 20 chr17 77470430 77470782 -12033771 - MER20B DNA MER1_type -420 363 4 1748 133 4 4 chr17 77471077 77471326 -12033227 + MER1B DNA MER1_type 131 339 0 221 321 98 36 chr17 77471490 77471602 -12032951 - MIR SINE MIR -70 138 20 21 0 0 0 chr17 77471996 77472017 -12032536 + AT_rich Low_complexity Low_complexity 1 21 0 1503 106 53 0 chr17 77473739 77473946 -12030607 + AluSx SINE Alu 1 218 -94 882 306 140 10 chr17 77473968 77474354 -12030199 - L2 LINE L2 -1 3312 2877 750 242 26 5 chr17 77474476 77474670 -12029883 - MIR SINE MIR 0 262 65 444 242 20 116 chr17 77475852 77475958 -12028595 + MER97b DNA MER1_type? 1 81 -972 2095 128 3 0 chr17 77475958 77476247 -12028306 + AluSx SINE Alu 4 293 -19 444 242 20 116 chr17 77476247 77476338 -12028215 + MER97b DNA MER1_type? 81 179 -874 1327 163 93 35 chr17 77476543 77476800 -12027753 + THE1B LTR MaLR 93 364 0 638 266 93 69 chr17 77476872 77477033 -12027520 + L2 LINE L2 2613 2769 -544 2298 102 3 3 chr17 77477033 77477338 -12027215 + AluSc SINE Alu 1 305 -4 638 266 93 69 chr17 77477338 77477419 -12027134 + L2 LINE L2 2769 2847 -466 1483 202 49 41 chr17 77477419 77477806 -12026747 + MLT1B LTR MaLR 1 390 0 638 266 93 69 chr17 77477806 77478080 -12026473 + L2 LINE L2 2847 3139 -174 4575 289 92 26 chr17 77478112 77480243 -12024310 - L2 LINE L2 -809 2505 228 2286 114 16 50 chr17 77480243 77480620 -12023933 + THE1B LTR MaLR 1 364 0 4575 289 92 26 chr17 77480620 77480652 -12023901 - L2 LINE L2 -3086 228 200 1646 195 68 86 chr17 77480674 77480814 -12023739 - MLT1C LTR MaLR -8 459 318 2023 128 14 0 chr17 77480814 77481102 -12023451 + AluSx SINE Alu 3 294 -18 1646 195 68 86 chr17 77481102 77481326 -12023227 - MLT1C LTR MaLR -149 318 102 1815 225 17 6 chr17 77481326 77481686 -12022867 - MLT1A1 LTR MaLR 0 365 2 1646 195 68 86 chr17 77481686 77481787 -12022766 - MLT1C LTR MaLR -365 102 1 536 300 142 42 chr17 77482060 77482127 -12022426 + L2 LINE L2 2841 2900 -413 1679 152 124 6 chr17 77482127 77482450 -12022103 + MER46B DNA MER2_type 1 236 0 536 300 142 42 chr17 77482450 77482792 -12021761 + L2 LINE L2 2900 3291 -22 255 31 0 0 chr17 77484678 77484710 -12019843 + (TG)n Simple_repeat Simple_repeat 2 33 0 * 306 123 0 0 chr17 77484705 77484762 -12019791 + (T)n Simple_repeat Simple_repeat 1 57 0 2405 73 0 0 chr17 77485893 77486205 -12018348 + AluY SINE Alu 1 312 0 188 200 55 36 chr17 77486375 77486430 -12018123 - MIR SINE MIR -113 149 94 1480 164 18 6 chr17 77486639 77486932 -12017621 + MLT1D LTR MaLR 225 505 0 350 315 142 6 chr17 77487750 77487951 -12016602 + MIR SINE MIR 25 249 -13 2188 101 10 0 chr17 77488126 77488422 -12016131 + AluSx SINE Alu 14 312 0 2233 98 0 20 chr17 77488500 77488806 -12015747 - AluSq SINE Alu -13 300 1 180 242 16 137 chr17 77489404 77489528 -12015025 + MIR SINE MIR 35 143 -65 412 301 28 34 chr17 77489626 77489802 -12014751 - MIR SINE MIR -27 235 61 371 221 134 54 chr17 77489832 77489981 -12014572 - L1ME LINE L1 -436 5685 5525 283 275 77 46 chr17 77490023 77490200 -12014353 - L1ME LINE L1 -919 5440 5255 749 203 0 27 chr17 77490296 77490444 -12014109 - MER58B DNA MER1_type -3 338 195 228 220 0 34 chr17 77490420 77490479 -12014074 - MER58B DNA MER1_type -284 57 1 * 2360 84 0 3 chr17 77491688 77491986 -12012567 - AluY SINE Alu -14 297 1 311 260 76 87 chr17 77493133 77493474 -12011079 + MLT1I LTR MaLR 76 409 0 389 343 84 0 chr17 77493478 77493644 -12010909 + MIR SINE MIR 73 252 -10 202 75 75 0 chr17 77493757 77493797 -12010756 + GA-rich Low_complexity Low_complexity 2 44 0 323 316 31 46 chr17 77497963 77498159 -12006394 + L2 LINE L2 2152 2344 -970 500 294 179 36 chr17 77498289 77498707 -12005846 + L2 LINE L2 2836 3313 0 482 353 141 13 chr17 77498732 77499270 -12005283 + L2 LINE L2 2367 2973 -341 226 353 98 8 chr17 77499372 77499505 -12005048 + L2 LINE L2 3116 3260 -12 2006 160 0 0 chr17 77499548 77499848 -12004705 + AluSx SINE Alu 1 300 -12 522 310 35 42 chr17 77500154 77500295 -12004258 + L1MEc LINE L1 27 167 -6229 2281 80 0 0 chr17 77500295 77500581 -12003972 - AluY SINE Alu -6 305 20 522 310 35 42 chr17 77500581 77500726 -12003827 + L1MEc LINE L1 167 311 -6085 2152 179 49 7 chr17 77500942 77501349 -12003204 + MSTB1 LTR MaLR 1 424 -8 2933 286 35 43 chr17 77501360 77502337 -12002216 + L1PA13 LINE L1 1 969 -5818 2731 208 45 7 chr17 77502470 77503087 -12001466 + L1PA13 LINE L1 1381 2021 -4766 205 358 171 16 chr17 77503358 77503481 -12001072 - L2 LINE L2 -15 3257 3116 686 264 98 25 chr17 77504451 77504728 -11999825 + MLT1L LTR MaLR 133 429 -186 2176 92 0 49 chr17 77504728 77505034 -11999519 + AluSg SINE Alu 1 291 -19 304 340 49 0 chr17 77505039 77505201 -11999352 + L1MC4 LINE L1 6595 6764 -1278 1343 117 31 0 chr17 77505734 77506028 -11998525 + L1MA3 LINE L1 5891 6299 -6 303 290 61 0 chr17 77507665 77507772 -11996781 - MIR SINE MIR -61 147 79 839 167 0 0 chr17 77507784 77507910 -11996643 + FLAM_C SINE Alu 1 126 -7 207 0 0 0 chr17 77508293 77508316 -11996237 + (A)n Simple_repeat Simple_repeat 1 23 0 2333 74 0 0 chr17 77509258 77509543 -11995010 + AluY SINE Alu 1 285 -26 198 0 0 0 chr17 77509560 77509582 -11994971 + (TAGA)n Simple_repeat Simple_repeat 4 25 0 6140 128 47 33 chr17 77509731 77510045 -11994508 - Tigger3b DNA MER2_type -1940 1088 780 2281 94 7 0 chr17 77510045 77510332 -11994221 + AluSx SINE Alu 1 289 -23 6140 128 47 33 chr17 77510332 77511090 -11993463 - Tigger3b DNA MER2_type -2248 780 1 218 316 76 41 chr17 77511099 77511206 -11993347 - MER5B DNA MER1_type 0 178 60 2193 98 3 3 chr17 77511206 77511515 -11993038 - AluSx SINE Alu 0 309 1 218 316 76 41 chr17 77511515 77511577 -11992976 - MER5B DNA MER1_type -118 60 2 1738 198 31 0 chr17 77511855 77512178 -11992375 - MER58B DNA MER1_type 0 341 9 246 62 0 0 chr17 77513552 77513584 -11990969 + (T)n Simple_repeat Simple_repeat 1 32 0 1988 160 29 3 chr17 77514003 77514347 -11990206 + L1MB3 LINE L1 5831 6183 0 2527 102 65 3 chr17 77514705 77515058 -11989495 - THE1C LTR MaLR 0 375 1 5425 107 40 8 chr17 77515087 77515914 -11988639 + L1PA13 LINE L1 5309 6158 -5 387 0 0 0 chr17 77518169 77518212 -11986341 + (TA)n Simple_repeat Simple_repeat 2 44 0 * 393 39 0 0 chr17 77518211 77518262 -11986291 + (GA)n Simple_repeat Simple_repeat 2 52 0 444 300 7 0 chr17 77519115 77519255 -11985298 + MLT2C1 LTR ERVL 53 193 -204 * 2066 178 146 25 chr17 77519146 77519634 -11984919 + MLT1E2 LTR MaLR 80 626 0 254 365 0 24 chr17 77519969 77520054 -11984499 - MIR SINE MIR -84 124 42 739 196 6 6 chr17 77521522 77521701 -11982852 + GA-rich Low_complexity Low_complexity 2 180 0 2174 116 7 7 chr17 77522049 77522359 -11982194 - AluSg SINE Alu 0 310 1 4047 63 0 2 chr17 77523054 77523530 -11981023 + L1PA6 LINE L1 5673 6147 -7 22 0 0 0 chr17 77524380 77524402 -11980151 + AT_rich Low_complexity Low_complexity 1 22 0 596 336 40 4 chr17 77525369 77525646 -11978907 + MLT1I LTR MaLR 3 289 -120 387 200 0 63 chr17 77525681 77525693 -11978860 + MLT1I LTR MaLR 293 304 -105 2442 116 21 32 chr17 77525693 77526072 -11978481 - THE1C LTR MaLR 0 375 1 387 200 0 63 chr17 77526072 77526154 -11978399 + MLT1I LTR MaLR 304 381 -28 290 307 79 0 chr17 77526600 77526727 -11977826 + MIR SINE MIR 94 230 -32 203 325 0 60 chr17 77527916 77528033 -11976520 - MIR SINE MIR -48 214 105 * 570 268 48 9 chr17 77528003 77528206 -11976347 + MIR SINE MIR 11 221 -41 417 95 48 119 chr17 77528274 77528313 -11976240 + MADE1 DNA Mariner 1 32 -48 2376 82 0 0 chr17 77528313 77528604 -11975949 - AluY SINE Alu -20 291 1 417 95 48 119 chr17 77528604 77528648 -11975905 + MADE1 DNA Mariner 32 78 -2 257 322 0 0 chr17 77528981 77529068 -11975485 - MIR SINE MIR 0 262 176 292 231 106 29 chr17 77529069 77529124 -11975429 + MER81 DNA DNA 2 51 -63 2452 124 28 3 chr17 77529124 77529479 -11975074 - THE1B LTR MaLR 0 364 1 292 231 106 29 chr17 77529479 77529527 -11975026 + MER81 DNA DNA 51 113 -1 2982 123 57 0 chr17 77529724 77530164 -11974389 - L1PA14 LINE L1 -1 6160 5696 2466 118 11 3 chr17 77530186 77530559 -11973994 + L1P4 LINE L1 5327 5702 -459 330 109 76 0 chr17 77536808 77536927 -11967626 + (TA)n Simple_repeat Simple_repeat 1 128 0 2213 108 0 0 chr17 77536929 77537226 -11967327 - AluY SINE Alu -14 297 1 189 196 0 0 chr17 77539852 77539898 -11964655 + (CCCA)n Simple_repeat Simple_repeat 4 49 0 1591 180 0 4 chr17 77541271 77541526 -11963027 - AluJo SINE Alu -34 278 25 288 0 0 0 chr17 77542389 77542421 -11962132 + (TG)n Simple_repeat Simple_repeat 2 33 0 189 0 0 0 chr17 77542973 77542994 -11961559 + (A)n Simple_repeat Simple_repeat 1 21 0 1103 143 32 0 chr17 77543663 77543852 -11960701 + L1MA4A LINE L1 6098 6292 -11 937 50 158 0 chr17 77544427 77544547 -11960006 + MER85 DNA T2_type 1 139 0 611 183 17 9 chr17 77544748 77544862 -11959691 - MER58B DNA MER1_type -8 333 219 2113 176 0 19 chr17 77544862 77545132 -11959421 - MLT1A1 LTR MaLR 0 365 102 2349 110 56 31 chr17 77545132 77545487 -11959066 - THE1B LTR MaLR 0 364 1 2113 176 0 19 chr17 77545487 77545586 -11958967 - MLT1A1 LTR MaLR -263 102 3 674 218 77 64 chr17 77545588 77545808 -11958745 - MER58B DNA MER1_type -118 223 1 2367 125 62 9 chr17 77545942 77546367 -11958186 + Tigger2 DNA MER2_type 1 2718 0 2161 132 0 0 chr17 77546679 77546983 -11957570 - AluSc SINE Alu -4 305 2 1967 277 45 31 chr17 77547031 77547612 -11956941 + MLT1E LTR MaLR 4 592 -1 227 355 28 35 chr17 77547635 77547776 -11956777 + L2 LINE L2 3169 3308 -5 281 267 27 0 chr17 77548811 77548886 -11955667 + MIR SINE MIR 117 193 -69 980 182 17 93 chr17 77548907 77549143 -11955410 - MER20 DNA MER1_type -1 218 1 354 304 58 53 chr17 77550051 77550294 -11954259 + MIR SINE MIR 3 246 -16 282 295 38 52 chr17 77550797 77550934 -11953619 - MER5B DNA MER1_type -41 148 1 207 0 0 0 chr17 77551025 77551048 -11953505 + (A)n Simple_repeat Simple_repeat 1 23 0 609 253 61 35 chr17 77551078 77551307 -11953246 + L1MC/D LINE L1 5582 5816 -1992 727 175 30 90 chr17 77551483 77551649 -11952904 - MER20 DNA MER1_type -63 156 1 219 295 78 85 chr17 77552397 77552526 -11952027 + L2 LINE L2 3141 3268 -4 1486 25 0 0 chr17 77552550 77552712 -11951841 - L1PA10 LINE L1 -1 6167 6006 2091 87 1 0 chr17 77552712 77553018 -11951535 + L1PA10 LINE L1 5616 5924 -207 2148 146 143 13 chr17 77554059 77554437 -11950116 - MSTA LTR MaLR -1 427 1 281 234 78 117 chr17 77554708 77554836 -11949717 + MIR SINE MIR 130 252 -10 750 200 21 42 chr17 77556309 77556499 -11948054 + MER53 DNA DNA 4 189 0 566 281 19 57 chr17 77556658 77556796 -11947757 + MIR SINE MIR 59 188 -74 2236 100 30 0 chr17 77556796 77557097 -11947456 + AluSg SINE Alu 1 310 0 566 281 19 57 chr17 77557097 77557168 -11947385 + MIR SINE MIR 188 260 -2 182 191 146 91 chr17 77557214 77557324 -11947229 + MIR3 SINE MIR 7 122 -86 2010 206 25 11 chr17 77557643 77558002 -11946551 + MLT1A1 LTR MaLR 2 365 0 2369 89 20 0 chr17 77558161 77558464 -11946089 + AluSg SINE Alu 1 309 -1 644 272 81 69 chr17 77559310 77559389 -11945164 + L1MC3 LINE L1 5525 5602 -2206 2485 74 0 6 chr17 77559389 77559701 -11944852 + AluY SINE Alu 1 310 -1 644 272 81 69 chr17 77559701 77559981 -11944572 + L1MC3 LINE L1 5602 5888 -1920 3060 211 42 2 chr17 77560021 77560665 -11943888 + L1MC3 LINE L1 7108 7777 -8 22 0 0 0 chr17 77560665 77560687 -11943866 + AT_rich Low_complexity Low_complexity 1 22 0 3268 67 0 0 chr17 77560687 77561075 -11943478 + L1PA6 LINE L1 5766 6153 -1 24 0 0 0 chr17 77562126 77562150 -11942403 + AT_rich Low_complexity Low_complexity 1 24 0 327 25 0 0 chr17 77562990 77563030 -11941523 + (CA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr17 77564188 77564209 -11940344 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr17 77565067 77565091 -11939462 + AT_rich Low_complexity Low_complexity 1 24 0 348 24 0 0 chr17 77566512 77566553 -11938000 + (GA)n Simple_repeat Simple_repeat 1 41 0 2002 120 41 0 chr17 77567831 77568123 -11936430 + AluSq SINE Alu 1 304 -9 233 247 290 0 chr17 77568214 77568307 -11936246 + L2 LINE L2 3173 3292 -21 2581 225 41 21 chr17 77568362 77568967 -11935586 - MER63 DNA MER1_type 0 1060 444 938 132 0 0 chr17 77568967 77569273 -11935280 - AluSg/x SINE Alu 0 467 162 380 97 16 0 chr17 77569273 77569335 -11935218 + (TC)n Simple_repeat Simple_repeat 1 63 0 886 156 0 0 chr17 77569335 77569463 -11935090 - AluSg/x SINE Alu -23 289 162 380 97 16 0 chr17 77569463 77569525 -11935028 + (TC)n Simple_repeat Simple_repeat 1 63 0 1818 151 21 3 chr17 77569525 77569809 -11934744 - AluSx SINE Alu -23 289 1 1127 175 142 0 chr17 77569831 77570077 -11934476 - MER63 DNA MER1_type -769 292 12 2038 129 0 0 chr17 77570080 77570358 -11934195 + AluSg SINE Alu 9 286 -24 1497 193 7 7 chr17 77570650 77570919 -11933634 + L1PB4 LINE L1 5888 6156 0 448 284 18 9 chr17 77571078 77571187 -11933366 - MIR SINE MIR -65 143 34 180 111 0 0 chr17 77571764 77571791 -11932762 + (TG)n Simple_repeat Simple_repeat 2 28 0 422 351 42 5 chr17 77571995 77572186 -11932367 - MIR SINE MIR 0 262 65 497 276 230 0 chr17 77572186 77572382 -11932171 + MER45C DNA AcHobo 348 588 -365 280 179 0 36 chr17 77572401 77572457 -11932096 + MER45C DNA AcHobo 900 953 0 960 195 25 0 chr17 77573126 77573285 -11931268 - FRAM SINE Alu -2 164 2 2760 94 40 0 chr17 77574389 77574739 -11929814 - THE1B LTR MaLR 0 364 1 2805 100 29 17 chr17 77574771 77575073 -11929480 - MSTA LTR MaLR 0 428 116 1764 145 83 46 chr17 77575073 77575424 -11929129 - THE1B LTR MaLR 0 364 1 2805 100 29 17 chr17 77575424 77575542 -11929011 - MSTA LTR MaLR -312 116 1 256 284 108 0 chr17 77575559 77575661 -11928892 - MIR SINE MIR -118 144 32 713 253 85 85 chr17 77575663 77575732 -11928821 + MLT1I LTR MaLR 1 69 -340 2834 94 8 0 chr17 77575732 77576093 -11928460 - THE1B LTR MaLR 0 364 1 713 253 85 85 chr17 77576093 77576387 -11928166 + MLT1I LTR MaLR 68 364 -45 258 273 75 43 chr17 77576430 77576591 -11927962 + L1ME3A LINE L1 6005 6170 0 2408 83 0 7 chr17 77577024 77577325 -11927228 - AluY SINE Alu -12 299 1 2159 113 33 3 chr17 77577914 77578214 -11926339 + AluSg SINE Alu 1 309 -1 738 269 60 28 chr17 77578943 77579192 -11925361 + MIR SINE MIR 6 262 0 213 39 0 0 chr17 77579470 77579496 -11925057 + (TC)n Simple_repeat Simple_repeat 2 27 0 306 220 22 33 chr17 77579496 77579587 -11924966 - L1MC4 LINE L1 -1339 6703 6614 281 307 0 69 chr17 77579712 77579813 -11924740 + L3 LINE CR1 1483 1576 -1 450 300 68 29 chr17 77581474 77581887 -11922666 + L1ME4a LINE L1 5689 6117 -4 479 169 24 97 chr17 77583593 77583717 -11920836 - MER20 DNA MER1_type 0 219 105 215 348 115 35 chr17 77585520 77585859 -11918694 + L2 LINE L2 2897 3262 -10 1057 289 99 53 chr17 77586356 77587025 -11917528 + LTR50 LTR ERVL 10 795 0 5648 43 1 0 chr17 77587090 77587756 -11916797 + L1PA5 LINE L1 5482 6148 -6 1857 245 19 12 chr17 77589025 77589510 -11915043 - Charlie4a DNA MER1_type 0 508 21 2902 99 15 5 chr17 77589686 77590098 -11914455 + L1PA10 LINE L1 5724 6139 -29 238 40 0 80 chr17 77590106 77590156 -11914397 + (TAAAA)n Simple_repeat Simple_repeat 1 46 0 381 220 153 8 chr17 77590334 77590452 -11914101 - LTR33 LTR ERVL -8 513 379 475 345 18 0 chr17 77590544 77590709 -11913844 - LTR33 LTR ERVL -261 260 93 2821 123 8 43 chr17 77591756 77592245 -11912308 + L1MC1 LINE L1 5854 6325 -8 378 0 0 0 chr17 77593508 77593550 -11911003 + (TG)n Simple_repeat Simple_repeat 2 43 0 650 267 120 30 chr17 77593727 77594239 -11910314 - MLT1L LTR MaLR 0 615 11 354 123 0 0 chr17 77594686 77594743 -11909810 + (TG)n Simple_repeat Simple_repeat 1 57 0 290 66 8 0 chr17 77595998 77596042 -11908511 - MLT2C1 LTR ERVL 0 397 362 1038 50 0 0 chr17 77596042 77596183 -11908370 + (TA)n Simple_repeat Simple_repeat 1 141 0 197 49 49 98 chr17 77596223 77596284 -11908269 + (TATAA)n Simple_repeat Simple_repeat 1 58 0 33 66 0 0 chr17 77596322 77596383 -11908170 + AT_rich Low_complexity Low_complexity 1 61 0 269 189 5 114 chr17 77596388 77596589 -11907964 + (TATAA)n Simple_repeat Simple_repeat 2 180 0 1915 166 46 0 chr17 77596618 77596944 -11907609 - MLT2C1 LTR ERVL -56 341 1 377 237 9 35 chr17 77597243 77597357 -11907196 - MIR SINE MIR -68 140 30 202 203 14 14 chr17 77597415 77597484 -11907069 + CT-rich Low_complexity Low_complexity 4 72 0 704 271 186 15 chr17 77598518 77598787 -11905766 + L2 LINE L2 2999 3313 0 592 283 48 21 chr17 77599040 77599276 -11905277 + MIR SINE MIR 22 262 0 22 70 0 0 chr17 77599276 77599319 -11905234 + AT_rich Low_complexity Low_complexity 1 43 0 594 242 115 6 chr17 77599321 77599478 -11905075 - MER96 DNA MER1_type -1 174 1 2434 81 50 31 chr17 77600010 77600367 -11904186 - THE1B LTR MaLR 0 364 1 1684 169 63 3 chr17 77600878 77601162 -11903391 + AluJb SINE Alu 1 301 -11 309 320 64 44 chr17 77602600 77602917 -11901636 + L2 LINE L2 2683 3001 -271 635 296 6 6 chr17 77603200 77603379 -11901174 + MIR SINE MIR 32 210 -52 201 256 0 0 chr17 77603425 77603468 -11901085 + (CAT)n Simple_repeat Simple_repeat 2 44 0 287 218 77 0 chr17 77603816 77603894 -11900659 - MIR SINE MIR -97 165 82 430 260 15 80 chr17 77604613 77604813 -11899740 + L2 LINE L2 2873 3059 -213 249 268 24 12 chr17 77606505 77606587 -11897966 + MIR SINE MIR 53 135 -127 2131 115 57 31 chr17 77606774 77607123 -11897430 - THE1B LTR MaLR -6 358 1 227 337 22 0 chr17 77607262 77607354 -11897199 + MIR3 SINE MIR 92 185 -23 1804 161 60 133 chr17 77608065 77608569 -11895984 - MLT1C LTR MaLR 0 467 1 284 272 70 9 chr17 77611076 77611190 -11893363 - MIR SINE MIR -6 256 136 716 147 9 0 chr17 77614087 77614196 -11890357 + FLAM_A SINE Alu 15 124 -18 2377 90 0 3 chr17 77614441 77614742 -11889811 - AluSc SINE Alu -7 302 3 205 262 49 0 chr17 77614963 77615024 -11889529 - MIR SINE MIR -60 148 85 22 0 0 0 chr17 77615505 77615527 -11889026 + AT_rich Low_complexity Low_complexity 1 22 0 2053 107 0 58 chr17 77617395 77617543 -11887010 + AluSx SINE Alu 1 123 -189 387 0 0 0 chr17 77617543 77617586 -11886967 + (CA)n Simple_repeat Simple_repeat 2 44 0 2053 107 0 58 chr17 77617586 77617747 -11886806 + AluSx SINE Alu 123 292 -20 380 281 29 29 chr17 77618050 77618221 -11886332 + MIR SINE MIR 71 241 -21 2229 92 0 48 chr17 77618254 77618570 -11885983 + AluSx SINE Alu 2 302 -10 202 324 0 29 chr17 77619176 77619278 -11885275 + MIR SINE MIR 55 153 -109 249 203 34 0 chr17 77619945 77620004 -11884549 + CT-rich Low_complexity Low_complexity 1 61 0 1846 176 0 7 chr17 77620771 77621072 -11883481 + AluJb SINE Alu 1 299 -13 216 355 85 24 chr17 77621268 77621516 -11883037 - L2 LINE L2 0 3272 3010 2144 123 0 7 chr17 77621800 77622145 -11882408 - AluSx SINE Alu 0 312 1 203 116 0 47 chr17 77624283 77624326 -11880227 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 227 246 0 18 chr17 77625989 77626046 -11878507 - L2 LINE L2 0 3313 3258 234 128 0 0 chr17 77629370 77629409 -11875144 + (CA)n Simple_repeat Simple_repeat 2 40 0 195 42 0 0 chr17 77629546 77629570 -11874983 + (TCCCC)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr17 77631234 77631256 -11873297 + AT_rich Low_complexity Low_complexity 1 22 0 333 265 0 0 chr17 77632582 77632699 -11871854 + (CCG)n Simple_repeat Simple_repeat 3 119 0 186 191 0 0 chr17 77633185 77633232 -11871321 + T-rich Low_complexity Low_complexity 1 47 0 27 49 0 0 chr17 77634233 77634274 -11870279 + AT_rich Low_complexity Low_complexity 1 41 0 21 71 0 0 chr17 77634364 77634406 -11870147 + AT_rich Low_complexity Low_complexity 1 42 0 210 37 0 0 chr17 77634599 77634626 -11869927 + (TG)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr17 77634790 77634821 -11869732 + AT_rich Low_complexity Low_complexity 1 31 0 244 216 0 0 chr17 77636129 77636180 -11868373 - L2 LINE L2 -4 3268 3218 188 297 44 55 chr17 77636542 77636633 -11867920 + MIR SINE MIR 87 176 -86 290 382 28 0 chr17 77636654 77636798 -11867755 + MER5A DNA MER1_type 40 187 -2 630 218 0 83 chr17 77637288 77637481 -11867072 + MER69A DNA AcHobo 1 177 0 236 158 0 0 chr17 77637559 77637597 -11866956 + L2 LINE L2 3261 3298 -15 224 237 132 26 chr17 77638187 77638263 -11866290 - L2 LINE L2 -65 3248 3165 737 315 229 20 chr17 77638709 77639316 -11865237 - L3 LINE CR1 -37 1540 807 623 298 57 0 chr17 77639378 77639584 -11864969 - MIR SINE MIR -15 247 22 664 321 89 36 chr17 77639669 77639791 -11864762 + L2 LINE L2 2685 2799 -514 1045 198 37 5 chr17 77639791 77640008 -11864545 + MER58A DNA MER1_type 1 224 0 664 321 89 36 chr17 77640008 77640484 -11864069 + L2 LINE L2 2799 3309 -4 189 0 0 0 chr17 77640555 77640576 -11863977 + (A)n Simple_repeat Simple_repeat 1 21 0 862 124 0 0 chr17 77641019 77641140 -11863413 + FLAM_A SINE Alu 1 121 -12 2235 96 0 0 chr17 77641717 77642044 -11862509 - AluSx SINE Alu 0 312 1 2645 236 94 7 chr17 77642951 77643641 -11860912 - L1ME2 LINE L1 0 6164 5415 279 299 13 0 chr17 77644946 77645023 -11859530 - L2 LINE L2 -11 3261 3184 628 186 39 16 chr17 77647037 77647166 -11857387 - MER20 DNA MER1_type -50 169 38 946 136 0 0 chr17 77647259 77647399 -11857154 + AluSq SINE Alu 40 179 -134 1127 121 0 0 chr17 77647400 77647574 -11856979 + AluSq SINE Alu 140 313 0 235 184 0 0 chr17 77648386 77648424 -11856129 + MIR SINE MIR 218 255 -7 248 228 0 13 chr17 77648427 77648506 -11856047 + GA-rich Low_complexity Low_complexity 4 81 0 457 256 141 25 chr17 77650057 77650256 -11854297 - MIR SINE MIR -19 243 22 254 236 18 0 chr17 77650545 77650600 -11853953 - LTR16B LTR ERVL 0 464 409 1713 167 3 19 chr17 77650602 77650913 -11853640 - AluJo SINE Alu -6 306 1 2225 86 3 0 chr17 77650926 77651268 -11853285 - AluSp SINE Alu 0 313 2 532 309 51 28 chr17 77651455 77651633 -11852920 - LTR16B LTR ERVL -274 190 9 212 294 105 56 chr17 77652075 77652218 -11852335 - MIR SINE MIR -9 253 104 180 342 9 54 chr17 77653633 77653744 -11850809 + L2 LINE L2 2799 2904 -410 251 246 33 0 chr17 77653746 77653807 -11850746 + CT-rich Low_complexity Low_complexity 1 63 0 468 338 118 40 chr17 77654226 77654753 -11849800 + L2 LINE L2 2338 2905 -409 1326 78 0 0 chr17 77655389 77655480 -11849073 + (GAA)n Simple_repeat Simple_repeat 1 271 0 1326 78 0 0 chr17 77655480 77655660 -11848893 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1059 139 0 0 chr17 77655717 77655897 -11848656 + (GAA)n Simple_repeat Simple_repeat 1 180 0 315 158 12 24 chr17 77655922 77656004 -11848549 + GA-rich Low_complexity Low_complexity 4 84 0 785 315 20 50 chr17 77656772 77657229 -11847324 - L3 LINE CR1 -571 1006 564 4087 88 5 25 chr17 77657343 77657527 -11847026 - MER41A LTR ERV1 0 554 368 2473 74 0 0 chr17 77657527 77657837 -11846716 - AluSg SINE Alu 0 310 1 4087 88 5 25 chr17 77657837 77658217 -11846336 - MER41A LTR ERV1 -186 368 1 767 320 39 0 chr17 77658972 77659206 -11845347 - MIR SINE MIR -2 260 18 319 233 27 14 chr17 77659665 77659811 -11844742 + GA-rich Low_complexity Low_complexity 2 149 0 819 284 23 38 chr17 77660797 77661061 -11843492 + MIR SINE MIR 1 260 -2 717 22 0 0 chr17 77661863 77661952 -11842601 - L1PA3 LINE L1 0 6155 6067 199 306 0 0 chr17 77662121 77662170 -11842383 - L2 LINE L2 0 3272 3224 193 310 178 30 chr17 77662349 77662652 -11841901 + L2 LINE L2 1328 1675 -1639 644 281 36 15 chr17 77662828 77663024 -11841529 + MER3 DNA MER1_type 1 200 -9 290 255 144 58 chr17 77663047 77663255 -11841298 + L1ME LINE L1 5464 5689 -432 1807 155 10 0 chr17 77663368 77663658 -11840895 + AluJo SINE Alu 1 293 -19 288 130 0 0 chr17 77663658 77663704 -11840849 + (TG)n Simple_repeat Simple_repeat 2 47 0 285 98 0 0 chr17 77663712 77663753 -11840800 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 355 83 0 chr17 77663760 77663881 -11840672 + MIR SINE MIR 131 261 -1 2205 88 7 10 chr17 77663884 77664178 -11840375 - AluSg SINE Alu -13 297 5 498 270 60 54 chr17 77664442 77664627 -11839926 + MIR SINE MIR 28 213 -49 288 277 110 9 chr17 77665282 77665432 -11839121 + MIR SINE MIR 21 187 -21 2098 112 0 0 chr17 77665457 77665752 -11838801 + AluSg SINE Alu 2 296 -14 1878 171 30 61 chr17 77665769 77666015 -11838538 + MLT1B LTR MaLR 1 232 -158 2087 95 41 0 chr17 77666015 77666310 -11838243 + AluSp SINE Alu 1 307 -6 1878 171 30 61 chr17 77666310 77666456 -11838097 + MLT1B LTR MaLR 232 381 -9 2185 98 7 0 chr17 77666718 77667023 -11837530 - AluY SINE Alu -4 307 1 773 255 51 37 chr17 77668717 77668959 -11835594 + MIR SINE MIR 19 262 0 2458 62 0 0 chr17 77669121 77669427 -11835126 - AluY SINE Alu -5 306 1 277 262 55 85 chr17 77670223 77670312 -11834241 + MER117 DNA MER1_type 6 89 -108 2033 85 24 7 chr17 77670312 77670605 -11833948 + AluY SINE Alu 1 298 -13 277 262 55 85 chr17 77670605 77670679 -11833874 + MER117 DNA MER1_type 89 164 -33 427 221 89 128 chr17 77671441 77671699 -11832854 + MLT1L LTR MaLR 314 561 -54 1885 143 17 3 chr17 77671722 77672023 -11832530 - AluSx SINE Alu -6 306 2 22 70 0 0 chr17 77672107 77672150 -11832403 + AT_rich Low_complexity Low_complexity 1 43 0 514 275 66 33 chr17 77672842 77673024 -11831529 - MIR SINE MIR -10 252 65 357 257 86 19 chr17 77673063 77673168 -11831385 + MLT1J1 LTR MaLR 72 183 -263 242 250 0 33 chr17 77673205 77673265 -11831288 + MLT1J2 LTR MaLR 267 324 -126 2215 103 0 3 chr17 77675259 77675569 -11828984 - AluSc SINE Alu 0 309 1 215 347 53 0 chr17 77675876 77675951 -11828602 - MIR3 SINE MIR -47 161 83 189 0 0 0 chr17 77676734 77676755 -11827798 + (T)n Simple_repeat Simple_repeat 1 21 0 207 178 44 0 chr17 77677133 77677178 -11827375 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 264 264 127 45 chr17 77677198 77677308 -11827245 - L2 LINE L2 -82 3190 3072 332 356 34 0 chr17 77678857 77679003 -11825550 + L2 LINE L2 2970 3120 -193 264 194 9 46 chr17 77679012 77679120 -11825433 + (TA)n Simple_repeat Simple_repeat 1 104 0 212 146 0 45 chr17 77679149 77679238 -11825315 + (TA)n Simple_repeat Simple_repeat 2 86 0 1523 152 126 7 chr17 77679321 77679590 -11824963 + AluJo SINE Alu 2 302 0 320 226 131 0 chr17 77680314 77680398 -11824155 - L1MC4 LINE L1 -1334 6708 6614 246 128 0 0 chr17 77680415 77680454 -11824099 + (GGA)n Simple_repeat Simple_repeat 2 40 0 332 178 14 0 chr17 77680797 77680870 -11823683 + CT-rich Low_complexity Low_complexity 1 74 0 199 202 92 161 chr17 77681632 77681760 -11822793 - L2 LINE L2 -46 3267 3132 1994 115 7 13 chr17 77681760 77682065 -11822488 + AluSx SINE Alu 6 308 -4 199 202 92 161 chr17 77682065 77682228 -11822325 - L2 LINE L2 -181 3132 2996 355 304 19 81 chr17 77682867 77683028 -11821525 - MIR SINE MIR -47 161 8 1855 112 0 0 chr17 77683056 77683314 -11821239 + AluSq SINE Alu 1 258 -55 230 303 10 61 chr17 77683762 77683861 -11820692 - MIR SINE MIR -73 135 42 201 129 0 0 chr17 77684356 77684387 -11820166 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 662 311 42 17 chr17 77686361 77686602 -11817951 - MIR SINE MIR -1 261 15 2346 71 10 0 chr17 77687368 77687677 -11816876 - AluSp SINE Alu -1 312 1 339 238 38 141 chr17 77687959 77688144 -11816409 - L1MC4 LINE L1 -11 8031 7866 180 111 0 0 chr17 77688305 77688332 -11816221 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 314 178 99 89 chr17 77688348 77688449 -11816104 - MER81 DNA DNA 0 114 13 270 324 0 45 chr17 77689077 77689188 -11815365 + MIR SINE MIR 34 139 -69 1016 325 84 12 chr17 77689585 77690182 -11814371 + L2 LINE L2 2264 2903 -411 424 239 46 9 chr17 77690340 77690449 -11814104 + L2 LINE L2 3193 3305 -8 518 261 43 39 chr17 77690627 77690834 -11813719 + L2 LINE L2 3104 3311 -2 196 328 17 50 chr17 77690876 77690995 -11813558 + L2 LINE L2 3154 3268 -4 252 111 0 0 chr17 77691560 77691605 -11812948 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 216 290 0 0 chr17 77691935 77691997 -11812556 + MIR3 SINE MIR 143 204 -4 2354 71 0 10 chr17 77693226 77693534 -11811019 - AluSc SINE Alu -4 305 1 856 214 0 0 chr17 77695222 77695367 -11809186 + FRAM SINE Alu 2 146 -30 697 154 18 0 chr17 77695423 77695533 -11809020 - AluJo SINE Alu -178 134 23 298 314 188 18 chr17 77695664 77695887 -11808666 + MIR SINE MIR 2 262 0 189 0 0 0 chr17 77695889 77695910 -11808643 + (A)n Simple_repeat Simple_repeat 1 21 0 225 132 0 0 chr17 77696862 77696900 -11807653 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 466 263 60 14 chr17 77696928 77697100 -11807453 - MIR SINE MIR -49 213 29 795 207 0 6 chr17 77697363 77697844 -11806709 + (TGG)n Simple_repeat Simple_repeat 1 478 0 600 246 0 0 chr17 77697811 77697986 -11806567 + (ATGGTG)n Simple_repeat Simple_repeat 5 179 0 * 912 169 0 0 chr17 77697993 77698171 -11806382 + (TGG)n Simple_repeat Simple_repeat 3 180 0 440 189 27 0 chr17 77698179 77698290 -11806263 + (ATGGTG)n Simple_repeat Simple_repeat 4 117 0 1560 177 29 26 chr17 77699287 77699598 -11804955 - AluJo SINE Alu 0 312 1 180 0 0 0 chr17 77699828 77699848 -11804705 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 2209 83 0 0 chr17 77699851 77700129 -11804424 - AluSc SINE Alu -31 278 1 336 77 0 0 chr17 77701818 77701870 -11802683 + (CA)n Simple_repeat Simple_repeat 1 52 0 2039 110 0 3 chr17 77702681 77702963 -11801590 - AluSq SINE Alu -32 281 1 1718 166 10 0 chr17 77702994 77703289 -11801264 + AluJb SINE Alu 1 298 -14 2250 78 7 0 chr17 77703314 77703609 -11800944 - AluSp SINE Alu -15 298 2 597 268 153 10 chr17 77703911 77704181 -11800372 - L1ME4a LINE L1 -262 5859 5614 2257 127 33 30 chr17 77704201 77704562 -11799991 + THE1B LTR MaLR 3 364 0 1892 115 34 14 chr17 77704593 77704888 -11799665 - AluSq SINE Alu -12 301 1 271 303 0 11 chr17 77705096 77705163 -11799390 + GA-rich Low_complexity Low_complexity 1 68 -20 1941 129 10 3 chr17 77705163 77705465 -11799088 + AluSg SINE Alu 4 307 -3 271 303 0 11 chr17 77705465 77705486 -11799067 + GA-rich Low_complexity Low_complexity 68 88 0 315 288 219 19 chr17 77705499 77705704 -11798849 - L2 LINE L2 -840 2474 2229 355 205 145 0 chr17 77705750 77705833 -11798720 - L1MC4 LINE L1 -1334 6708 6614 204 40 0 0 chr17 77705835 77705860 -11798693 + (GA)n Simple_repeat Simple_repeat 2 26 0 2240 89 3 25 chr17 77706823 77707138 -11797415 + AluSx SINE Alu 1 308 -4 2470 59 0 0 chr17 77707635 77707940 -11796613 + AluY SINE Alu 1 305 -6 428 344 41 14 chr17 77708879 77709100 -11795453 + MLT1K LTR MaLR 325 551 -37 24 53 0 0 chr17 77709567 77709605 -11794948 + AT_rich Low_complexity Low_complexity 1 38 0 302 224 12 0 chr17 77709902 77709987 -11794566 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 216 390 45 15 chr17 77710285 77710554 -11793999 + L2 LINE L2 2384 2660 -654 6797 47 4 0 chr17 77710576 77711392 -11793161 - L1PA5 LINE L1 -3 6151 5333 1257 40 6 11 chr17 77711894 77712068 -11792485 + (TAGA)n Simple_repeat Simple_repeat 1 173 0 461 338 65 27 chr17 77712239 77712502 -11792051 + L2 LINE L2 2514 2786 -528 2018 130 0 0 chr17 77712714 77713007 -11791546 - AluSq SINE Alu -20 293 1 186 242 231 11 chr17 77713224 77713315 -11791238 + L2 LINE L2 3160 3270 -2 332 282 24 57 chr17 77713528 77713652 -11790901 - MIR SINE MIR -55 207 88 328 231 137 98 chr17 77715755 77715902 -11788651 - MIR SINE MIR -48 160 8 318 391 31 0 chr17 77716061 77716222 -11788331 + MIR SINE MIR 21 186 -76 2291 60 0 13 chr17 77716917 77717257 -11787296 - AluSq SINE Alu 0 313 1 392 268 184 42 chr17 77717651 77717841 -11786712 + MIR SINE MIR 20 236 -26 200 338 27 0 chr17 77718440 77718514 -11786039 - L2 LINE L2 -9 3304 3229 328 250 76 53 chr17 77718744 77718876 -11785677 + MIR SINE MIR 16 150 -58 2050 130 58 3 chr17 77718965 77719295 -11785258 + MER7A DNA MER2_type 1 346 0 204 40 0 0 chr17 77719295 77719320 -11785233 + (CA)n Simple_repeat Simple_repeat 1 25 0 234 242 0 0 chr17 77719365 77719431 -11785122 + (TA)n Simple_repeat Simple_repeat 1 66 0 2241 98 0 3 chr17 77719534 77719840 -11784713 - AluSc SINE Alu -4 305 1 347 263 45 60 chr17 77720282 77720415 -11784138 - L3 LINE CR1 -7 1570 1440 183 80 0 0 chr17 77721435 77721460 -11783093 + (T)n Simple_repeat Simple_repeat 1 25 0 24 0 0 0 chr17 77721480 77721504 -11783049 + AT_rich Low_complexity Low_complexity 1 24 0 7254 133 18 10 chr17 77721505 77723520 -11781033 - L1MA3 LINE L1 -9 6296 4273 1561 253 47 22 chr17 77723724 77724174 -11780379 + L1ME3A LINE L1 5710 6170 0 2193 94 21 0 chr17 77724918 77725206 -11779347 - AluSc SINE Alu -19 290 1 434 229 122 0 chr17 77725584 77725715 -11778838 - MER5A DNA MER1_type -29 160 14 2336 99 0 26 chr17 77726720 77727054 -11777499 - AluSx SINE Alu 0 312 1 180 0 0 0 chr17 77730093 77730113 -11774440 + (A)n Simple_repeat Simple_repeat 1 20 0 2279 92 0 7 chr17 77730906 77731199 -11773354 - AluY SINE Alu -20 291 1 378 264 31 32 chr17 77731839 77731986 -11772567 + MIR SINE MIR 13 162 -46 195 69 0 0 chr17 77732193 77732222 -11772331 + (TA)n Simple_repeat Simple_repeat 2 30 0 432 219 16 32 chr17 77732352 77732475 -11772078 + MIR SINE MIR 21 141 -121 403 253 28 71 chr17 77733064 77733246 -11771307 - MER5B DNA MER1_type -3 175 2 284 322 26 86 chr17 77733281 77733347 -11771206 - MER5B DNA MER1_type 0 178 110 2173 139 0 0 chr17 77733347 77733650 -11770903 + AluSx SINE Alu 1 303 -9 284 322 26 86 chr17 77733650 77733735 -11770818 - MER5B DNA MER1_type -68 110 36 663 234 97 52 chr17 77733747 77734016 -11770537 + L1MC4a LINE L1 5678 5958 -1850 1625 181 9 44 chr17 77734081 77734402 -11770151 + AluJb SINE Alu 1 310 -2 2199 94 0 0 chr17 77734480 77734757 -11769796 + AluSc SINE Alu 1 277 -32 396 0 0 0 chr17 77734757 77734801 -11769752 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 248 231 13 90 chr17 77734848 77734926 -11769627 + MER58A DNA MER1_type 6 77 -30 8343 185 73 85 chr17 77734927 77735368 -11769185 - L1MC3 LINE L1 -32 7753 7308 347 49 0 0 chr17 77735368 77735409 -11769144 - U1 snRNA snRNA -124 41 1 8343 185 73 85 chr17 77735409 77735449 -11769104 - L1MC3 LINE L1 -477 7308 7269 2350 111 3 0 chr17 77735449 77735755 -11768798 + AluSx SINE Alu 1 307 -5 8343 185 73 85 chr17 77735755 77735898 -11768655 - L1MC3 LINE L1 -516 7269 7126 450 225 0 0 chr17 77735898 77735987 -11768566 - MLT1F1 LTR MaLR -442 125 37 8343 185 73 85 chr17 77735987 77736120 -11768433 - L1MC3 LINE L1 -659 7126 6993 2385 89 0 13 chr17 77736120 77736433 -11768120 - AluY SINE Alu -1 310 2 8343 185 73 85 chr17 77736433 77737067 -11767486 - L1MC3 LINE L1 -792 6993 6353 2260 91 7 0 chr17 77737067 77737352 -11767201 - AluSx SINE Alu -25 287 1 8343 185 73 85 chr17 77737352 77738017 -11766536 - L1MC3 LINE L1 -1432 6353 5681 1970 125 0 24 chr17 77738017 77738305 -11766248 - AluSx SINE Alu -21 291 11 8343 185 73 85 chr17 77738305 77739473 -11765080 - L1MC3 LINE L1 -2104 5681 4457 916 206 6 22 chr17 77739473 77739653 -11764900 + MER58A DNA MER1_type 46 222 -2 243 0 0 0 chr17 77739877 77739904 -11764649 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 323 15 0 chr17 77739947 77740012 -11764541 + L2 LINE L2 3243 3308 -5 1060 151 0 24 chr17 77740021 77740187 -11764366 + AluSg/x SINE Alu 131 292 -20 433 226 75 85 chr17 77741193 77741392 -11763161 - MIR SINE MIR -3 259 63 395 240 20 10 chr17 77741997 77742097 -11762456 + L2 LINE L2 3171 3271 -1 191 130 0 43 chr17 77742560 77742606 -11761947 + (CTA)n Simple_repeat Simple_repeat 1 44 0 2010 125 30 7 chr17 77744100 77744404 -11760149 - AluSp SINE Alu -1 312 2 467 106 30 0 chr17 77744548 77744614 -11759939 - MER20 DNA MER1_type -151 68 1 433 248 9 9 chr17 77744866 77744979 -11759574 - MER53 DNA DNA -64 125 13 681 194 0 15 chr17 77745065 77745199 -11759354 + FLAM_C SINE Alu 2 133 -10 1206 101 0 15 chr17 77745244 77745567 -11758986 + (GGGA)n Simple_repeat Simple_repeat 1 319 0 2016 135 108 18 chr17 77747474 77747808 -11756745 + THE1B LTR MaLR 1 364 0 966 208 108 42 chr17 77747949 77748237 -11756316 - MLT1F1 LTR MaLR -2 565 259 1800 202 23 18 chr17 77748284 77748675 -11755878 + MLT2D LTR ERVL 2 394 -20 370 190 35 11 chr17 77748682 77748856 -11755697 + (TCTCTG)n Simple_repeat Simple_repeat 2 179 0 * 379 221 0 11 chr17 77748825 77749006 -11755547 + CT-rich Low_complexity Low_complexity 2 180 0 245 175 18 18 chr17 77749031 77749088 -11755465 + MLT2D LTR ERVL 358 414 0 * 417 232 97 10 chr17 77749088 77749240 -11755313 - MLT1F1 LTR MaLR -373 194 22 2200 122 0 0 chr17 77749694 77749989 -11754564 - AluSx SINE Alu -17 295 1 184 293 0 0 chr17 77750069 77750110 -11754443 - L2 LINE L2 -267 3046 3006 403 289 111 83 chr17 77750456 77750854 -11753699 + L2 LINE L2 2194 2612 -702 1846 153 7 14 chr17 77750854 77751148 -11753405 - AluJo SINE Alu -14 298 7 403 289 111 83 chr17 77751148 77751289 -11753264 + L2 LINE L2 2612 2748 -566 2223 99 0 38 chr17 77751563 77751876 -11752677 + AluSg SINE Alu 1 301 -9 261 274 156 22 chr17 77751944 77752079 -11752474 + L2 LINE L2 3116 3268 -4 216 307 85 63 chr17 77752485 77752674 -11751879 - L2 LINE L2 -142 3171 2979 1310 209 236 52 chr17 77752698 77753181 -11751372 + MLT1G1 LTR MaLR 14 585 -5 728 332 19 0 chr17 77753188 77753453 -11751100 - L2 LINE L2 -345 2969 2700 332 248 33 74 chr17 77753534 77753655 -11750898 + MER5B DNA MER1_type 4 119 -59 254 32 32 81 chr17 77753661 77753723 -11750830 + (CAAAAA)n Simple_repeat Simple_repeat 3 61 0 949 241 43 0 chr17 77753778 77753985 -11750568 + MER58A DNA MER1_type 1 216 -8 246 270 175 8 chr17 77754012 77754138 -11750415 + MER5A DNA MER1_type 43 189 0 285 257 0 29 chr17 77754592 77754662 -11749891 - MER5B DNA MER1_type -47 131 64 863 188 44 6 chr17 77754723 77754904 -11749649 - MER5A DNA MER1_type 0 189 2 330 243 39 39 chr17 77755575 77755678 -11748875 - L2 LINE L2 0 3313 3211 222 320 27 0 chr17 77756275 77756350 -11748203 + L2 LINE L2 3154 3230 -42 2176 130 0 0 chr17 77757021 77757321 -11747232 + AluSx SINE Alu 1 300 -12 208 342 33 59 chr17 77757350 77757502 -11747051 + L2 LINE L2 2904 3051 -221 269 312 83 51 chr17 77758913 77759070 -11745483 - MIR SINE MIR -79 183 22 1750 175 7 17 chr17 77760615 77760912 -11743641 + AluJo SINE Alu 1 294 -18 242 284 161 0 chr17 77761394 77761475 -11743078 - 7SK RNA RNA -99 94 1 2303 112 0 3 chr17 77761660 77761973 -11742580 - AluSx SINE Alu 0 312 1 2239 125 131 5 chr17 77763178 77763553 -11741000 + MSTA LTR MaLR 1 422 -6 268 327 28 9 chr17 77763560 77763667 -11740886 + MIR SINE MIR 24 132 -130 4844 61 0 7 chr17 77764780 77765389 -11739164 - L1PA7 LINE L1 -1 6153 5549 300 223 21 43 chr17 77765495 77765589 -11738964 - MER103 DNA DNA -55 111 20 2507 67 3 0 chr17 77765663 77765963 -11738590 - AluY SINE Alu -10 301 1 211 341 70 22 chr17 77766872 77767101 -11737452 + L2 LINE L2 2176 2415 -899 188 0 74 0 chr17 77767408 77767435 -11737118 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1516 148 70 0 chr17 77767667 77767910 -11736643 - AluJo SINE Alu -52 260 1 247 303 197 7 chr17 77769413 77769555 -11734998 + MIR SINE MIR 36 204 -58 2519 112 8 11 chr17 77770204 77770569 -11733984 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr17 77770740 77770761 -11733792 + AT_rich Low_complexity Low_complexity 1 21 0 503 292 42 24 chr17 77771179 77771347 -11733206 - MIR SINE MIR -70 192 22 1563 248 16 77 chr17 77771478 77772022 -11732531 + MLT1J LTR MaLR 1 511 0 234 0 0 0 chr17 77774002 77774028 -11730525 + (A)n Simple_repeat Simple_repeat 1 26 0 305 248 192 48 chr17 77774871 77774996 -11729557 + MER5A DNA MER1_type 40 182 -7 470 309 78 18 chr17 77775684 77775901 -11728652 + MIR SINE MIR 32 261 -1 475 324 7 7 chr17 77776741 77776877 -11727676 + MIR SINE MIR 29 164 -98 747 259 86 11 chr17 77776878 77777279 -11727274 - LTR33 LTR ERVL 0 521 54 343 321 76 0 chr17 77778429 77778560 -11725993 + MIR SINE MIR 109 249 -13 2195 91 0 0 chr17 77778570 77778891 -11725662 + AluSq SINE Alu 1 321 0 1524 158 58 10 chr17 77780080 77780372 -11724181 + AluJo SINE Alu 1 306 -6 1863 147 10 3 chr17 77780863 77781163 -11723390 + AluJb SINE Alu 1 302 -10 360 0 0 0 chr17 77781821 77781861 -11722692 + (CA)n Simple_repeat Simple_repeat 2 41 0 374 291 34 8 chr17 77782601 77782718 -11721835 - MIR SINE MIR -72 136 17 228 207 0 35 chr17 77782776 77782834 -11721719 + L2 LINE L2 3217 3272 0 216 0 0 0 chr17 77783364 77783388 -11721165 + (CA)n Simple_repeat Simple_repeat 1 24 0 254 239 0 0 chr17 77783940 77783986 -11720567 + L2 LINE L2 3258 3303 -10 2188 195 35 67 chr17 77783997 77784566 -11719987 - MLT2B3 LTR ERVL 0 554 4 258 81 0 0 chr17 77784566 77784603 -11719950 + MSTA LTR MaLR 1 37 -391 2175 105 54 29 chr17 77784608 77784959 -11719594 + THE1B LTR MaLR 5 364 0 797 201 60 11 chr17 77785215 77785399 -11719154 + L1ME1 LINE L1 5916 6108 -58 217 281 73 49 chr17 77785942 77786024 -11718529 - L2 LINE L2 -33 3280 3197 26 0 0 0 chr17 77786194 77786220 -11718333 + AT_rich Low_complexity Low_complexity 1 26 0 393 232 85 61 chr17 77786221 77786385 -11718168 - MIR SINE MIR -3 259 92 1660 160 0 17 chr17 77786542 77786836 -11717717 - AluJo SINE Alu -23 289 1 3567 196 83 34 chr17 77787172 77787829 -11716724 - L1ME1 LINE L1 -5 6161 5459 2239 83 0 0 chr17 77787829 77788117 -11716436 - AluSg SINE Alu -22 288 1 3567 196 83 34 chr17 77788117 77788378 -11716175 - L1ME1 LINE L1 -707 5459 5212 322 185 25 37 chr17 77788764 77788845 -11715708 - L1ME3A LINE L1 -1 6169 6090 318 206 0 0 chr17 77788928 77788996 -11715557 + (TG)n Simple_repeat Simple_repeat 1 68 0 1024 148 51 42 chr17 77789057 77789274 -11715279 + L1MA3 LINE L1 6087 6305 0 485 272 39 33 chr17 77789312 77789492 -11715061 - MIR SINE MIR -46 216 36 224 263 111 50 chr17 77790188 77790248 -11714305 - L2 LINE L2 -9 3263 3193 1039 202 28 0 chr17 77790248 77790461 -11714092 - MER20 DNA MER1_type 0 219 1 224 263 111 50 chr17 77790461 77790499 -11714054 - L2 LINE L2 -79 3193 3159 1999 149 29 47 chr17 77790549 77790892 -11713661 + MER1B DNA MER1_type 1 337 0 315 295 39 48 chr17 77790892 77791088 -11713465 + MIR SINE MIR 11 206 -56 797 184 57 0 chr17 77791386 77791544 -11713009 - MER58B DNA MER1_type -5 336 170 253 245 0 0 chr17 77791571 77791624 -11712929 + L2 LINE L2 3183 3235 -37 875 176 22 6 chr17 77791875 77792057 -11712496 - MER53 DNA DNA -3 186 2 1431 229 126 46 chr17 77793808 77794002 -11710551 + L1MC4 LINE L1 6459 6636 -1406 309 89 0 0 chr17 77794002 77794047 -11710506 + (TG)n Simple_repeat Simple_repeat 1 45 0 1431 229 126 46 chr17 77794047 77794289 -11710264 + L1MC4 LINE L1 6636 6857 -1185 2209 98 7 0 chr17 77794289 77794594 -11709959 + AluSp SINE Alu 1 307 -6 1431 229 126 46 chr17 77794594 77795346 -11709207 + L1MC4 LINE L1 6857 7899 -143 285 193 0 0 chr17 77795347 77795404 -11709149 + L1MC4 LINE L1 7986 8042 0 182 354 162 10 chr17 77796996 77797095 -11707458 - L2 LINE L2 -11 3302 3189 2061 119 0 10 chr17 77797289 77797591 -11706962 - AluSx SINE Alu -13 299 1 286 334 146 0 chr17 77798075 77798241 -11706312 - MIR SINE MIR -59 203 17 198 248 179 60 chr17 77798370 77798487 -11706066 - L2 LINE L2 -4 3268 3138 2076 71 21 94 chr17 77798567 77798906 -11705647 - AluYb8 SINE Alu -4 314 1 207 304 0 29 chr17 77799295 77799364 -11705189 + MIR SINE MIR 83 149 -113 989 334 130 50 chr17 77799640 77800613 -11703940 + L2 LINE L2 711 1604 -1710 1770 157 20 0 chr17 77800613 77800912 -11703641 - AluJb SINE Alu -6 306 2 989 334 130 50 chr17 77800912 77802036 -11702517 + L2 LINE L2 1604 2977 -337 1238 176 36 36 chr17 77802353 77802632 -11701921 - AluJo SINE Alu -11 301 23 330 22 22 0 chr17 77802812 77802857 -11701696 + MADE1 DNA Mariner 35 80 0 325 256 225 0 chr17 77804014 77804143 -11700410 - MIR SINE MIR -13 249 92 347 179 0 0 chr17 77805263 77805319 -11699234 + MIR SINE MIR 183 238 -24 202 276 52 0 chr17 77805286 77805344 -11699209 + L2 LINE L2 3251 3311 -2 * 228 327 158 0 chr17 77806590 77806691 -11697862 - MIR3 SINE MIR -10 198 82 2142 92 0 0 chr17 77806993 77807298 -11697255 - AluSc SINE Alu 0 305 1 566 251 39 39 chr17 77807616 77807795 -11696758 + MER5A DNA MER1_type 2 180 -9 415 293 38 45 chr17 77808016 77808149 -11696404 + L2 LINE L2 3141 3272 0 1378 175 128 79 chr17 77808785 77809041 -11695512 - MLT1C LTR MaLR 0 467 178 2190 105 0 0 chr17 77809041 77809336 -11695217 + AluSg SINE Alu 1 295 -15 1378 175 128 79 chr17 77809336 77809524 -11695029 - MLT1C LTR MaLR -289 178 1 666 240 175 20 chr17 77810005 77810205 -11694348 + MIR SINE MIR 32 262 0 333 241 40 103 chr17 77811365 77811539 -11693014 + MER5A DNA MER1_type 1 163 -26 1069 190 98 5 chr17 77811571 77811776 -11692777 + MER58A DNA MER1_type 1 224 0 350 250 40 0 chr17 77811784 77811860 -11692693 + MER5B DNA MER1_type 1 79 -99 367 282 51 37 chr17 77812158 77812349 -11692204 + MER5B DNA MER1_type 1 178 0 351 265 0 0 chr17 77812548 77812699 -11691854 + (TG)n Simple_repeat Simple_repeat 1 151 0 288 226 0 0 chr17 77812788 77812881 -11691672 + (TG)n Simple_repeat Simple_repeat 1 93 0 229 236 0 56 chr17 77812903 77812975 -11691578 + (TATG)n Simple_repeat Simple_repeat 3 70 0 450 237 0 0 chr17 77812976 77813286 -11691267 + (TG)n Simple_repeat Simple_repeat 1 310 0 609 194 0 0 chr17 77813315 77813561 -11690992 + (TG)n Simple_repeat Simple_repeat 1 246 0 318 237 0 0 chr17 77813581 77813720 -11690833 + (TG)n Simple_repeat Simple_repeat 1 139 0 321 299 60 55 chr17 77813894 77814095 -11690458 + MIR SINE MIR 54 255 -7 * 468 297 19 62 chr17 77814090 77814299 -11690254 - L2 LINE L2 -1 3312 3113 243 371 76 8 chr17 77815575 77815707 -11688846 - L2 LINE L2 -7 3265 3125 2140 103 3 0 chr17 77815710 77816010 -11688543 - AluSx SINE Alu -7 305 5 894 311 61 9 chr17 77816034 77816398 -11688155 + L2 LINE L2 2768 3149 -164 330 263 131 0 chr17 77816551 77816650 -11687903 + L2 LINE L2 3202 3313 0 548 282 138 52 chr17 77817862 77818112 -11686441 - L2 LINE L2 -2 3311 3019 1774 173 7 0 chr17 77818112 77818412 -11686141 - AluSx SINE Alu -10 302 1 548 282 138 52 chr17 77818412 77818523 -11686030 - L2 LINE L2 -294 3019 2919 2186 105 0 0 chr17 77819384 77819680 -11684873 + AluSq SINE Alu 1 296 -17 1484 192 95 45 chr17 77819870 77820312 -11684241 + MLT1C LTR MaLR 4 467 0 190 312 138 9 chr17 77820498 77820607 -11683946 - MIR SINE MIR -24 238 116 2315 93 0 3 chr17 77821115 77821426 -11683127 - AluSx SINE Alu 0 312 3 977 196 5 5 chr17 77821457 77821641 -11682912 - MER20 DNA MER1_type 0 219 36 263 298 114 8 chr17 77822584 77822715 -11681838 + L2 LINE L2 2969 3113 -200 184 154 0 0 chr17 77822727 77822753 -11681800 - L2 LINE L2 -91 3222 3197 7813 159 41 30 chr17 77822917 77825086 -11679467 - L1MC3 LINE L1 0 7785 5589 28 29 0 0 chr17 77825129 77825164 -11679389 + AT_rich Low_complexity Low_complexity 1 35 0 618 278 107 0 chr17 77825732 77825901 -11678652 - MER5A DNA MER1_type 0 189 3 220 325 50 42 chr17 77826136 77826256 -11678297 - MIR3 SINE MIR -51 157 37 342 0 0 0 chr17 77826425 77826463 -11678090 + (CA)n Simple_repeat Simple_repeat 2 39 0 241 280 238 21 chr17 77827870 77828013 -11676540 - MER5B DNA MER1_type 0 178 5 638 212 146 6 chr17 77828036 77828201 -11676352 - MER5A DNA MER1_type -1 188 1 1863 126 9 93 chr17 77828293 77828627 -11675926 - AluSq SINE Alu -7 306 1 2228 116 0 7 chr17 77828629 77828930 -11675623 - AluSq SINE Alu -14 299 1 506 277 168 0 chr17 77829065 77829220 -11675333 + MER5A DNA MER1_type 9 189 0 3028 128 0 0 chr17 77829639 77830067 -11674486 - MSTA LTR MaLR 0 428 1 409 394 32 9 chr17 77830345 77830561 -11673992 + MIR SINE MIR 8 228 -34 191 238 100 25 chr17 77830833 77830913 -11673640 + L2 LINE L2 2501 2586 -728 428 303 85 12 chr17 77831296 77831461 -11673092 - MIR SINE MIR -79 183 7 338 192 64 0 chr17 77831606 77831684 -11672869 + MLT1K LTR MaLR 145 227 -361 263 254 0 0 chr17 77831733 77831792 -11672761 + MLT1K LTR MaLR 360 418 -170 298 248 59 85 chr17 77831865 77832018 -11672535 - MLT1J2 LTR MaLR -52 398 278 229 274 67 67 chr17 77832178 77832342 -11672211 + MLT1K LTR MaLR 414 577 -11 669 278 12 6 chr17 77832756 77832925 -11671628 + MIR3 SINE MIR 36 205 -3 319 257 126 27 chr17 77833093 77833235 -11671318 + MIR SINE MIR 20 135 -73 270 337 85 0 chr17 77833260 77833374 -11671179 + MIR SINE MIR 30 152 -85 259 234 193 41 chr17 77833406 77833551 -11671002 - MIR SINE MIR -82 180 14 310 232 105 21 chr17 77834242 77834337 -11670216 - L2 LINE L2 0 3313 3211 236 276 98 24 chr17 77834697 77834820 -11669733 - L2 LINE L2 -4 3309 3178 306 340 68 7 chr17 77834979 77835126 -11669427 - L2 LINE L2 0 3272 3117 238 222 86 37 chr17 77835665 77835746 -11668807 + MIR SINE MIR 163 247 -15 324 230 40 14 chr17 77835909 77835983 -11668570 - L3b LINE CR1 -283 1300 1225 1614 267 50 16 chr17 77836015 77836662 -11667891 + L1ME4a LINE L1 5384 6052 -69 853 201 0 0 chr17 77836795 77836954 -11667599 - MER58B DNA MER1_type -15 326 168 330 264 0 46 chr17 77836956 77837043 -11667510 - L1MC4 LINE L1 -1339 6703 6621 2217 98 31 9 chr17 77837299 77837625 -11666928 - L1PB2 LINE L1 0 6151 5819 888 170 88 50 chr17 77837632 77837814 -11666739 + 7SLRNA srpRNA srpRNA 46 234 -86 2585 165 36 2 chr17 77838010 77838458 -11666095 + LTR32 LTR ERVL 9 471 0 232 272 0 11 chr17 77838757 77838773 -11665780 - L1MC4 LINE L1 -1338 6704 6689 2342 83 0 3 chr17 77838773 77839062 -11665491 + AluY SINE Alu 1 288 -23 232 272 0 11 chr17 77839062 77839137 -11665416 - L1MC4 LINE L1 -1353 6689 6614 198 167 0 0 chr17 77839137 77839173 -11665380 + (TA)n Simple_repeat Simple_repeat 2 37 0 2553 69 0 0 chr17 77839723 77840029 -11664524 + AluY SINE Alu 1 306 -5 2374 110 0 0 chr17 77840463 77840771 -11663782 + AluSx SINE Alu 1 308 -4 284 278 176 32 chr17 77841079 77841295 -11663258 - L2 LINE L2 -219 3053 2807 180 0 0 0 chr17 77841335 77841355 -11663198 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1527 169 23 8 chr17 77841358 77841618 -11662935 - AluJo SINE Alu -34 278 15 222 291 135 57 chr17 77841791 77842035 -11662518 - L2 LINE L2 -584 2730 2468 302 313 109 57 chr17 77842411 77842852 -11661701 - L2 LINE L2 -1407 1907 1444 333 300 25 33 chr17 77842921 77843041 -11661512 - MIR3 SINE MIR -45 163 45 282 328 61 0 chr17 77843096 77843227 -11661326 - L2 LINE L2 -1900 1414 1276 294 29 0 0 chr17 77844475 77844510 -11660043 + (TG)n Simple_repeat Simple_repeat 2 36 0 232 241 0 0 chr17 77844510 77844564 -11659989 + (CA)n Simple_repeat Simple_repeat 2 55 0 186 191 0 0 chr17 77844912 77844954 -11659599 + C-rich Low_complexity Low_complexity 2 43 0 966 216 0 0 chr17 77845426 77845616 -11658937 + MER3 DNA MER1_type 1 190 -19 243 215 108 43 chr17 77845781 77845874 -11658679 + MIR SINE MIR 84 182 -80 300 341 6 24 chr17 77846176 77846346 -11658207 + C-rich Low_complexity Low_complexity 4 170 0 * 362 318 29 6 chr17 77846236 77846406 -11658147 + CT-rich Low_complexity Low_complexity 5 178 0 510 236 47 0 chr17 77846406 77846533 -11658020 + MER3 DNA MER1_type 53 185 -24 239 329 25 13 chr17 77846735 77846814 -11657739 + L2 LINE L2 3178 3257 -15 487 232 0 0 chr17 77846858 77846957 -11657596 + MER58 DNA MER1_type 1 99 -2321 * 529 165 10 19 chr17 77846955 77847058 -11657495 + MER58 DNA MER1_type 2319 2420 0 386 252 164 38 chr17 77848355 77848514 -11656039 - MIR SINE MIR -2 260 82 823 228 36 0 chr17 77848531 77848724 -11655829 + MER3 DNA MER1_type 3 202 -7 217 333 0 0 chr17 77848729 77848783 -11655770 - MIR SINE MIR -207 55 2 217 280 0 0 chr17 77849236 77849286 -11655267 - L2 LINE L2 -219 3053 3004 291 286 0 0 chr17 77849926 77850010 -11654543 + (CA)n Simple_repeat Simple_repeat 1 84 0 191 233 0 0 chr17 77850115 77850158 -11654395 - MIR SINE MIR 0 262 220 268 331 56 7 chr17 77852479 77852621 -11651932 - MIR3 SINE MIR -40 168 20 226 238 209 29 chr17 77852989 77853094 -11651459 - L2 LINE L2 -9 3304 3181 318 243 107 19 chr17 77853120 77853223 -11651330 + L2 LINE L2 3196 3307 -6 313 310 40 0 chr17 77853275 77853375 -11651178 - L2 LINE L2 -236 3036 2933 1138 234 103 32 chr17 77853382 77853428 -11651125 - MLT1I LTR MaLR -2 407 366 2155 123 70 20 chr17 77853428 77853785 -11650768 - THE1C LTR MaLR 0 375 1 1138 234 103 32 chr17 77853785 77854118 -11650435 - MLT1I LTR MaLR -43 366 1 278 307 57 14 chr17 77854175 77854315 -11650238 - L2 LINE L2 -217 3055 2910 360 250 20 0 chr17 77854480 77854580 -11649973 - L1MD3 LINE L1 -8 7987 7886 1371 186 67 8 chr17 77854580 77854741 -11649812 - AluJb SINE Alu -18 294 111 297 0 0 0 chr17 77854741 77854774 -11649779 + (TG)n Simple_repeat Simple_repeat 2 34 0 1371 186 67 8 chr17 77854774 77854865 -11649688 - AluJb SINE Alu -201 111 27 827 291 42 56 chr17 77854869 77855440 -11649113 - L1MC4 LINE L1 -229 7813 7251 2048 117 76 0 chr17 77855441 77855731 -11648822 + AluSx SINE Alu 1 312 0 297 238 95 9 chr17 77856365 77856470 -11648083 + MIR SINE MIR 88 201 -61 535 189 0 0 chr17 77856736 77856842 -11647711 + MLT1B LTR MaLR 73 178 -212 702 157 0 0 chr17 77856842 77856957 -11647596 + L1MA5A LINE L1 6173 6287 -10 320 261 43 35 chr17 77856962 77857077 -11647476 + L1MDa LINE L1 2394 2509 -4031 445 156 18 114 chr17 77857079 77857246 -11647307 + MLT1B LTR MaLR 164 314 -76 1971 94 44 44 chr17 77857434 77857732 -11646821 + AluSq SINE Alu 1 298 -15 697 256 72 14 chr17 77860214 77860421 -11644132 + MIR SINE MIR 43 261 -1 189 263 74 63 chr17 77861304 77861399 -11643154 + MIR SINE MIR 16 111 -151 1797 190 74 0 chr17 77863240 77863279 -11641274 - MLT2C2 LTR ERVL 0 464 429 641 76 34 0 chr17 77863279 77863397 -11641156 + (TAGA)n Simple_repeat Simple_repeat 1 122 0 1797 190 74 0 chr17 77863397 77863720 -11640833 - MLT2C2 LTR ERVL -35 429 75 258 31 0 0 chr17 77863732 77863764 -11640789 - L1P4 LINE L1 -526 5640 5609 1249 181 13 0 chr17 77863765 77864002 -11640551 + Tigger2 DNA MER2_type 2468 2707 -11 1723 202 31 8 chr17 77864170 77864526 -11640027 - MLT1A1 LTR MaLR -1 364 1 367 185 22 33 chr17 77864975 77865067 -11639486 - LTR33 LTR ERVL -1 520 430 2329 105 7 0 chr17 77865160 77865465 -11639088 + AluSx SINE Alu 1 307 -5 2246 150 38 38 chr17 77865479 77865997 -11638556 + MLT2A2 LTR ERVL 1 515 0 679 226 72 11 chr17 77865997 77866177 -11638376 - LTR33 LTR ERVL -325 196 6 311 298 30 69 chr17 77866298 77866429 -11638124 + MIR3 SINE MIR 76 201 -7 194 203 40 68 chr17 77866568 77866642 -11637911 + MIR SINE MIR 92 163 -99 186 43 0 0 chr17 77866722 77866745 -11637808 + (T)n Simple_repeat Simple_repeat 1 23 0 275 335 165 10 chr17 77867661 77867867 -11636686 - MIR SINE MIR 0 262 25 2534 78 7 0 chr17 77869794 77870101 -11634452 - AluSc SINE Alu 0 309 1 306 313 21 0 chr17 77870199 77870295 -11634258 - L2 LINE L2 -24 3289 3192 373 304 135 13 chr17 77870352 77870685 -11633868 + LTR16A LTR ERVL 34 442 -8 1218 188 5 27 chr17 77871487 77871711 -11632842 + MER20 DNA MER1_type 1 219 0 363 314 27 9 chr17 77872992 77873104 -11631449 - MIR SINE MIR -63 145 42 705 243 30 0 chr17 77873644 77873809 -11630744 - MIR SINE MIR -39 223 55 2410 78 3 3 chr17 77873977 77874273 -11630280 + AluY SINE Alu 1 296 -15 381 212 137 68 chr17 77874365 77874511 -11630042 - MLT1J2 LTR MaLR -17 433 278 389 278 59 22 chr17 77874550 77874703 -11629850 - MLT1J2 LTR MaLR -287 159 3 1245 290 106 21 chr17 77874771 77875337 -11629216 - L3 LINE CR1 -472 1105 492 194 402 49 0 chr17 77875473 77875555 -11628998 - MIR SINE MIR -103 105 20 272 330 102 11 chr17 77876435 77876611 -11627942 - MIR SINE MIR -38 224 33 222 37 0 0 chr17 77876686 77876713 -11627840 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 1984 122 7 7 chr17 77876746 77877032 -11627521 + AluSx SINE Alu 18 303 -9 2185 101 0 0 chr17 77877419 77877773 -11626780 - AluSx SINE Alu 0 388 35 2201 86 34 3 chr17 77878440 77878732 -11625821 - AluSx SINE Alu -6 306 6 3722 46 2 0 chr17 77878969 77879443 -11625110 + L1PA8 LINE L1 5697 6171 -1 259 320 48 32 chr17 77879443 77879568 -11624985 - MIR3 SINE MIR -67 141 15 202 360 53 0 chr17 77880323 77880398 -11624155 - L2 LINE L2 -87 3185 3107 480 314 59 18 chr17 77881406 77881626 -11622927 - MIR SINE MIR -13 249 21 2377 111 0 0 chr17 77881702 77882009 -11622544 + AluSc SINE Alu 1 307 -2 2051 137 56 6 chr17 77882209 77882566 -11621987 + THE1C LTR MaLR 1 375 0 188 346 112 19 chr17 77883330 77883437 -11621116 - MIR SINE MIR -117 145 29 234 231 17 23 chr17 77883592 77883666 -11620887 + MIR SINE MIR 33 101 -107 2450 100 0 0 chr17 77884529 77884838 -11619715 - AluSx SINE Alu -3 309 1 270 143 0 0 chr17 77885258 77885307 -11619246 + (CA)n Simple_repeat Simple_repeat 1 49 0 953 206 0 24 chr17 77886250 77886459 -11618094 - MER3 DNA MER1_type 0 209 6 339 263 32 0 chr17 77886483 77886578 -11617975 + MER5A DNA MER1_type 12 109 -80 1784 134 17 33 chr17 77886812 77887111 -11617442 + AluJo SINE Alu 1 294 -18 527 53 0 26 chr17 77887116 77887192 -11617361 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 228 333 225 0 chr17 77888992 77889130 -11615423 + MIR SINE MIR 46 214 -48 304 269 96 0 chr17 77889133 77889237 -11615316 + MER81 DNA DNA 1 114 0 2471 95 3 0 chr17 77889818 77890124 -11614429 - AluSp SINE Alu -6 307 1 999 232 34 0 chr17 77892326 77892533 -11612020 - MER58A DNA MER1_type -10 214 1 759 246 129 9 chr17 77892551 77892783 -11611770 + MIR SINE MIR 1 260 -2 716 181 11 96 chr17 77892976 77893005 -11611548 + MER5B DNA MER1_type 17 47 -131 2458 67 7 0 chr17 77893005 77893303 -11611250 - AluY SINE Alu -11 300 1 716 181 11 96 chr17 77893303 77893450 -11611103 + MER5B DNA MER1_type 47 178 0 430 237 164 13 chr17 77893498 77893650 -11610903 + MER5A DNA MER1_type 9 183 -6 1906 167 0 22 chr17 77893728 77894045 -11610508 + AluJb SINE Alu 1 310 -2 420 216 85 119 chr17 77894129 77894365 -11610188 - L1MC4 LINE L1 -1 8041 7814 1491 165 142 0 chr17 77895001 77895268 -11609285 - AluSx SINE Alu -7 305 1 2365 116 0 0 chr17 77895947 77896257 -11608296 + AluSx SINE Alu 1 310 -2 790 188 21 107 chr17 77897087 77897166 -11607387 - MER20 DNA MER1_type -5 214 130 2144 133 0 7 chr17 77897166 77897467 -11607086 - AluJb SINE Alu -13 299 1 790 188 21 107 chr17 77897467 77897621 -11606932 - MER20 DNA MER1_type -89 130 1 287 320 13 58 chr17 77897928 77898084 -11606469 - MER91A DNA MER1_type -40 156 8 1735 205 174 7 chr17 77898198 77898628 -11605925 - MLT1D LTR MaLR -3 502 1 2104 140 3 13 chr17 77898836 77899151 -11605402 - AluSx SINE Alu 0 312 1 2018 98 98 20 chr17 77899616 77899964 -11604589 - THE1C LTR MaLR 0 375 1 350 298 11 89 chr17 77900098 77900289 -11604264 - MIR SINE MIR -30 232 57 431 324 131 5 chr17 77904200 77904422 -11600131 - MIR SINE MIR -11 251 2 613 295 139 35 chr17 77904677 77905023 -11599530 + MLT1J2 LTR MaLR 69 450 0 209 29 0 57 chr17 77905443 77905478 -11599075 + (CCCCCA)n Simple_repeat Simple_repeat 6 38 0 1636 150 0 59 chr17 77905971 77906258 -11598295 - AluJb SINE Alu -8 304 35 891 114 0 8 chr17 77906976 77907108 -11597445 + FLAM_C SINE Alu 1 131 -2 2574 61 0 0 chr17 77907218 77907513 -11597040 + AluY SINE Alu 6 300 -11 335 251 17 123 chr17 77908765 77908944 -11595609 - MIR3 SINE MIR -28 180 21 249 267 23 70 chr17 77909409 77909495 -11595058 - MIR3 SINE MIR -7 201 120 262 266 46 55 chr17 77909736 77909845 -11594708 + L3 LINE CR1 1465 1572 -5 1508 157 49 30 chr17 77909875 77910142 -11594411 + AluJb SINE Alu 1 272 -40 239 71 24 0 chr17 77910144 77910186 -11594367 + (GA)n Simple_repeat Simple_repeat 2 44 0 207 100 0 0 chr17 77911009 77911039 -11593514 + (TG)n Simple_repeat Simple_repeat 1 30 0 584 207 9 0 chr17 77911443 77911554 -11592999 - MER81 DNA DNA -1 113 2 1778 142 3 51 chr17 77913064 77913381 -11591172 - AluJb SINE Alu 0 304 2 2152 127 21 32 chr17 77914274 77914653 -11589900 - THE1C LTR MaLR 0 375 1 203 303 61 0 chr17 77914778 77914844 -11589709 - L2 LINE L2 -39 3274 3205 1155 108 184 0 chr17 77915121 77915139 -11589414 + MER21A LTR ERV1 1 14 -917 423 0 0 0 chr17 77915139 77915186 -11589367 + (CA)n Simple_repeat Simple_repeat 2 48 0 1155 108 184 0 chr17 77915186 77915390 -11589163 + MER21A LTR ERV1 14 264 -667 2778 139 106 19 chr17 77915395 77915907 -11588646 + MER21A LTR ERV1 376 931 0 929 189 85 39 chr17 77917047 77917427 -11587126 + MLT1D LTR MaLR 1 462 -43 1161 173 79 10 chr17 77917428 77917752 -11586801 + MER21B LTR ERV1 158 524 -339 828 158 41 0 chr17 77917805 77917951 -11586602 - MER21A LTR ERV1 -6 925 774 298 130 0 0 chr17 77917950 77917996 -11586557 + MLT1D LTR MaLR 457 502 -3 * 493 244 135 0 chr17 77918215 77918371 -11586182 + MIR SINE MIR 70 246 -16 1311 263 30 53 chr17 77918410 77918885 -11585668 + MLT1J LTR MaLR 5 468 -43 2135 115 31 0 chr17 77918892 77919180 -11585373 - AluSx SINE Alu -15 297 1 1001 196 22 0 chr17 77919261 77919445 -11585108 + MER5A DNA MER1_type 1 188 -1 664 227 44 71 chr17 77919454 77919679 -11584874 - MER20 DNA MER1_type 0 219 1 675 247 41 6 chr17 77919688 77919858 -11584695 + MER5B DNA MER1_type 2 177 -1 2270 68 0 68 chr17 77921018 77921340 -11583213 - AluSq SINE Alu -13 300 1 246 128 0 0 chr17 77922965 77923004 -11581549 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 356 204 230 46 chr17 77923128 77923280 -11581273 + MIR SINE MIR 35 214 -48 2371 91 0 23 chr17 77923284 77923591 -11580962 - AluSc SINE Alu -9 300 1 192 77 0 0 chr17 77924926 77924952 -11579601 + (TC)n Simple_repeat Simple_repeat 1 26 0 1592 185 117 38 chr17 77925732 77926176 -11578377 + MLT1D LTR MaLR 27 505 0 1727 192 117 23 chr17 77926855 77927282 -11577271 - MLT1C LTR MaLR 0 467 1 1206 209 67 14 chr17 77927295 77927577 -11576976 - AluJo SINE Alu -15 297 1 357 359 68 15 chr17 77927739 77927945 -11576608 + L3 LINE CR1 1321 1537 -40 753 186 0 0 chr17 77928261 77928379 -11576174 + FLAM_A SINE Alu 1 118 -15 362 209 36 109 chr17 77928884 77928994 -11575559 - MIR SINE MIR -80 182 81 32 26 0 0 chr17 77930973 77931012 -11573541 + AT_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr17 77931995 77932016 -11572537 + (CA)n Simple_repeat Simple_repeat 1 21 0 285 29 0 0 chr17 77933023 77933057 -11571496 + (T)n Simple_repeat Simple_repeat 1 34 0 327 247 220 42 chr17 77933339 77933801 -11570752 + L2 LINE L2 2639 3184 -129 1771 158 78 29 chr17 77933897 77934244 -11570309 + THE1B LTR MaLR 1 364 0 361 230 142 9 chr17 77934244 77934357 -11570196 + L2 LINE L2 3186 3313 0 307 200 136 45 chr17 77935441 77935551 -11569002 - MIR SINE MIR -66 196 77 545 290 113 13 chr17 77935578 77935809 -11568744 - MIR SINE MIR -7 255 2 210 71 0 0 chr17 77936023 77936051 -11568502 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 474 287 90 11 chr17 77936572 77936760 -11567793 + MIR SINE MIR 60 262 0 248 341 0 24 chr17 77937469 77937551 -11567002 + MIR SINE MIR 183 262 0 490 235 32 118 chr17 77938646 77938833 -11565720 - MER5B DNA MER1_type -4 174 4 293 294 22 11 chr17 77938857 77938949 -11565604 - MER5A DNA MER1_type -88 101 9 581 177 47 99 chr17 77940134 77940285 -11564268 - ORSL DNA AcHobo -42 233 97 2239 108 30 0 chr17 77940285 77940580 -11563973 - AluSx SINE Alu -8 304 1 581 177 47 99 chr17 77940580 77940660 -11563893 - ORSL DNA AcHobo -178 97 14 200 211 0 0 chr17 77941540 77941578 -11562975 + CT-rich Low_complexity Low_complexity 1 38 0 257 109 18 0 chr17 77942190 77942245 -11562308 + (TA)n Simple_repeat Simple_repeat 2 57 0 2450 83 0 3 chr17 77942804 77943105 -11561448 - AluSq SINE Alu -13 300 1 197 293 17 0 chr17 77943115 77943173 -11561380 + MIR SINE MIR 107 165 -97 331 252 108 0 chr17 77943374 77943485 -11561068 + L1ME4a LINE L1 5930 6052 -69 192 345 105 20 chr17 77944319 77944519 -11560034 + L2 LINE L2 2225 2441 -873 255 114 0 0 chr17 77944684 77944728 -11559825 + (TTCC)n Simple_repeat Simple_repeat 2 45 0 1716 188 7 0 chr17 77944762 77945060 -11559493 - AluJo SINE Alu -10 302 3 247 353 23 8 chr17 77945109 77945242 -11559311 + L2 LINE L2 2836 2970 -343 315 281 23 16 chr17 77945286 77945414 -11559139 + L2 LINE L2 3141 3269 -44 270 314 23 0 chr17 77945458 77945544 -11559009 - MIR SINE MIR -128 134 47 194 371 30 30 chr17 77945581 77945813 -11558740 + L2 LINE L2 2613 2844 -470 2018 136 3 13 chr17 77946062 77946372 -11558181 + AluSx SINE Alu 1 307 -5 771 207 111 37 chr17 77948045 77948225 -11556328 + MIR SINE MIR 21 221 -41 2827 62 8 0 chr17 77948225 77948577 -11555976 + THE1A LTR MaLR 1 355 0 771 207 111 37 chr17 77948577 77948613 -11555940 + MIR SINE MIR 221 253 -9 265 366 63 0 chr17 77949263 77949405 -11555148 - L2 LINE L2 -16 3297 3147 206 321 0 0 chr17 77949604 77949657 -11554896 + MIR SINE MIR 45 97 -165 2500 87 0 3 chr17 77951211 77951523 -11553030 + AluSq SINE Alu 1 311 -2 315 0 0 0 chr17 77951788 77951823 -11552730 + (TG)n Simple_repeat Simple_repeat 2 36 0 24 53 0 0 chr17 77952423 77952461 -11552092 + AT_rich Low_complexity Low_complexity 1 38 0 775 153 0 0 chr17 77952462 77952580 -11551973 + AluJo/FLAM SINE Alu 2 119 -193 2309 82 0 51 chr17 77952581 77952897 -11551656 - AluSg SINE Alu -10 300 1 21 0 0 0 chr17 77952916 77952937 -11551616 + AT_rich Low_complexity Low_complexity 1 21 0 387 0 0 0 chr17 77955001 77955044 -11549509 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 243 0 0 0 chr17 77955187 77955214 -11549339 + (A)n Simple_repeat Simple_repeat 1 27 0 783 265 0 55 chr17 77957543 77957800 -11546753 + MER102b DNA MER1_type 99 341 0 2472 255 43 50 chr17 77958231 77958963 -11545590 + L1MC4 LINE L1 6942 7666 -376 3248 61 0 10 chr17 77958963 77959372 -11545181 - L1PA8 LINE L1 -9 6163 5759 2472 255 43 50 chr17 77959372 77959746 -11544807 + L1MC4 LINE L1 7666 8041 -1 1963 153 3 0 chr17 77960666 77960961 -11543592 + AluSx SINE Alu 13 308 -4 2981 55 3 0 chr17 77962520 77962886 -11541667 - L1PA8 LINE L1 0 6172 5806 1338 171 52 77 chr17 77962932 77963295 -11541258 + MLT1A1 LTR MaLR 1 354 -11 2687 115 23 156 chr17 77963456 77964066 -11540487 + MER1A DNA MER1_type 1 529 0 1076 229 28 55 chr17 77965225 77965348 -11539205 - MER113 DNA MER1_type? 0 521 396 2023 97 0 4 chr17 77965348 77965605 -11538948 - AluSx SINE Alu -8 304 49 1076 229 28 55 chr17 77965605 77965844 -11538709 - MER113 DNA MER1_type? -125 396 169 183 80 0 0 chr17 77965869 77965894 -11538659 + (T)n Simple_repeat Simple_repeat 1 25 0 1540 117 0 0 chr17 77965898 77966103 -11538450 - AluSq SINE Alu -108 205 1 764 169 9 143 chr17 77966125 77966386 -11538167 - MER20 DNA MER1_type -2 217 1 238 319 55 54 chr17 77966852 77967035 -11537518 - MIR3 SINE MIR -27 181 4 2251 96 0 10 chr17 77967340 77967631 -11536922 - AluSg SINE Alu -22 288 1 198 156 0 44 chr17 77967966 77968011 -11536542 - MIR SINE MIR -106 156 114 261 323 39 65 chr17 77968794 77968949 -11535604 - L2 LINE L2 0 3313 3163 942 274 23 0 chr17 77969466 77969685 -11534868 - MER58A DNA MER1_type 0 224 1 483 244 215 71 chr17 77969685 77969767 -11534786 + L2 LINE L2 2957 3026 -287 2048 156 3 3 chr17 77969767 77970069 -11534484 - AluJb SINE Alu -10 302 1 483 244 215 71 chr17 77970069 77970080 -11534473 + L2 LINE L2 3026 3034 -279 2427 86 3 0 chr17 77970080 77970381 -11534172 - AluSp SINE Alu -7 306 5 483 244 215 71 chr17 77970381 77970597 -11533956 + L2 LINE L2 3034 3312 -1 286 224 41 0 chr17 77970757 77970855 -11533698 + CT-rich Low_complexity Low_complexity 5 106 0 214 277 0 0 chr17 77971002 77971049 -11533504 + A-rich Low_complexity Low_complexity 5 51 0 3619 124 31 6 chr17 77971590 77972038 -11532515 + MER1A DNA MER1_type 1 465 -2235 198 0 0 0 chr17 77972038 77972060 -11532493 + (CACCC)n Simple_repeat Simple_repeat 3 24 0 3619 124 31 6 chr17 77972060 77972125 -11532428 + MER1A DNA MER1_type 465 527 0 2094 161 0 0 chr17 77972990 77973301 -11531252 - AluJb SINE Alu -1 311 1 254 176 0 0 chr17 77974162 77974213 -11530340 - MER4-int LTR ERV1 -5436 1162 1112 1690 202 40 0 chr17 77975374 77975701 -11528852 - MER58B DNA MER1_type -1 340 1 297 310 94 20 chr17 77975771 77975974 -11528579 - MIR SINE MIR -1 261 44 570 98 0 0 chr17 77976864 77976946 -11527607 + (GA)n Simple_repeat Simple_repeat 1 82 0 180 333 68 8 chr17 77977589 77977706 -11526847 + MIR SINE MIR 135 258 -4 387 257 0 10 chr17 77979525 77979626 -11524927 - MIR3 SINE MIR -45 163 64 1898 122 47 3 chr17 77980293 77980589 -11523964 - AluSg SINE Alu -1 309 1 3019 93 2 0 chr17 77981663 77982073 -11522480 + L1P5 LINE L1 5381 5791 -360 304 202 36 36 chr17 77982099 77982183 -11522370 + L1MCa LINE L1 1995 2078 -4348 * 366 283 101 0 chr17 77982158 77982257 -11522296 + L1MC4 LINE L1 6875 6983 -1339 424 258 0 21 chr17 77982258 77982351 -11522202 + L1MC4 LINE L1 6613 6703 -1339 329 288 0 54 chr17 77982268 77982379 -11522174 - L1MC4 LINE L1 -1338 6704 6600 * 249 269 0 32 chr17 77982379 77982472 -11522081 + L1MC4 LINE L1 6614 6703 -1339 209 244 0 0 chr17 77982472 77982513 -11522040 + (TA)n Simple_repeat Simple_repeat 2 42 0 373 279 23 0 chr17 77982515 77982601 -11521952 - L1MC4 LINE L1 -1342 6700 6613 331 244 37 12 chr17 77982548 77982630 -11521923 + L1MCa LINE L1 1995 2078 -4348 * 2567 93 8 5 chr17 77982643 77983010 -11521543 + L1PB1 LINE L1 5782 6149 -2 388 321 52 0 chr17 77983052 77983186 -11521367 - MIR SINE MIR -55 207 67 279 0 0 0 chr17 77983999 77984030 -11520523 + (TC)n Simple_repeat Simple_repeat 2 32 0 1078 182 37 14 chr17 77984587 77984801 -11519752 - MER20 DNA MER1_type 0 219 1 855 258 44 35 chr17 77985750 77986068 -11518485 + MER33 DNA MER1_type 3 323 -1 1987 106 3 0 chr17 77986720 77987003 -11517550 + AluSx SINE Alu 29 312 0 1739 171 7 3 chr17 77987027 77987336 -11517217 + AluSx SINE Alu 1 310 -2 893 185 105 25 chr17 77987446 77987646 -11516907 + MER20 DNA MER1_type 2 217 -2 1009 236 108 28 chr17 77988708 77989060 -11515493 + MLT1C LTR MaLR 8 387 -80 431 257 40 33 chr17 77989065 77989207 -11515346 + L2 LINE L2 3161 3306 -7 2044 116 0 0 chr17 77989207 77989499 -11515054 + AluSx SINE Alu 1 292 -20 493 125 0 0 chr17 77991228 77991300 -11513253 - MSTA LTR MaLR 0 428 357 1994 158 3 0 chr17 77991300 77991657 -11512896 + AluSx SINE Alu 1 358 0 2231 130 35 27 chr17 77991658 77992026 -11512527 - MSTA LTR MaLR -57 371 1 1050 243 14 0 chr17 77992447 77992665 -11511888 - MER58A DNA MER1_type -3 221 1 366 291 156 11 chr17 77992819 77992998 -11511555 + MIR SINE MIR 12 216 -46 2204 80 0 0 chr17 77993139 77993613 -11510940 + AluY SINE Alu 1 474 0 535 298 29 55 chr17 77993618 77993813 -11510740 + L1ME4a LINE L1 5630 5818 -303 5680 200 55 19 chr17 77993813 77993922 -11510631 + Charlie1a DNA MER1_type 1 105 -2656 1613 86 8 45 chr17 77993922 77994167 -11510386 + AluSp SINE Alu 65 300 -13 5680 200 55 19 chr17 77994167 77995457 -11509096 + Charlie1a DNA MER1_type 105 1451 -4 535 298 29 55 chr17 77995457 77995536 -11509017 + L1ME4a LINE L1 5818 5897 -224 214 211 0 0 chr17 77995688 77995726 -11508827 + L2 LINE L2 3261 3298 -15 225 250 24 12 chr17 77995846 77995930 -11508623 + (TA)n Simple_repeat Simple_repeat 1 85 0 226 322 69 46 chr17 77997175 77997262 -11507291 - L3b LINE CR1 -5 1578 1490 22 0 0 0 chr17 77997633 77997655 -11506898 + AT_rich Low_complexity Low_complexity 1 22 0 200 213 66 16 chr17 77998886 77998947 -11505606 - MIR SINE MIR -110 152 89 230 271 34 0 chr17 77999167 77999226 -11505327 + L3 LINE CR1 1495 1555 -22 332 304 74 74 chr17 77999580 77999797 -11504756 + LTR67 LTR ERVL 46 262 -295 331 211 0 0 chr17 77999802 77999859 -11504694 - L1ME LINE L1 -422 5748 5692 779 262 33 55 chr17 77999951 78000134 -11504419 + LTR67 LTR ERVL 293 470 -87 868 121 0 30 chr17 78000134 78000266 -11504287 - FLAM_C SINE Alu -5 128 1 779 262 33 55 chr17 78000266 78000353 -11504200 + LTR67 LTR ERVL 470 557 0 1967 223 36 64 chr17 78000445 78000537 -11504016 - L1ME3A LINE L1 -1 6169 6076 2342 85 0 3 chr17 78000537 78000842 -11503711 + AluY SINE Alu 1 304 -7 1967 223 36 64 chr17 78000842 78001359 -11503194 - L1ME3A LINE L1 -94 6076 5577 1631 173 7 3 chr17 78001370 78001654 -11502899 - AluJb SINE Alu -19 293 9 652 291 27 67 chr17 78002123 78002422 -11502131 - Charlie8 DNA MER1_type -2128 289 3 219 167 24 0 chr17 78003081 78003123 -11501430 + (CA)n Simple_repeat Simple_repeat 1 43 0 188 380 0 25 chr17 78003206 78003285 -11501268 + L2 LINE L2 3189 3265 -7 187 253 12 84 chr17 78003913 78003996 -11500557 - MIR SINE MIR -184 78 2 2187 93 3 3 chr17 78004154 78004456 -11500097 - AluSc SINE Alu -7 302 1 2076 112 7 0 chr17 78004648 78004942 -11499611 + AluSx SINE Alu 1 296 -16 209 360 97 17 chr17 78004984 78005159 -11499394 - L2 LINE L2 -219 3053 2865 940 224 102 73 chr17 78005764 78005913 -11498640 + MLT1H LTR MaLR 20 163 -386 2337 145 3 27 chr17 78005913 78006286 -11498267 - THE1B LTR MaLR 0 364 1 940 224 102 73 chr17 78006286 78006320 -11498233 + MLT1H LTR MaLR 163 195 -354 2428 63 0 0 chr17 78006320 78006621 -11497932 + AluY SINE Alu 1 301 -10 940 224 102 73 chr17 78006621 78006912 -11497641 + MLT1H LTR MaLR 195 549 0 222 196 0 22 chr17 78007095 78007141 -11497412 + L2 LINE L2 3266 3310 -3 * 458 286 68 44 chr17 78007132 78007384 -11497169 - L3b LINE CR1 -98 1485 1228 188 263 263 26 chr17 78007476 78007590 -11496963 + MER5A DNA MER1_type 47 187 -2 * 521 200 11 0 chr17 78007501 78007596 -11496957 - MER5A DNA MER1_type -83 106 11 236 209 0 0 chr17 78007604 78007647 -11496906 - MIR SINE MIR -62 146 104 399 312 39 26 chr17 78007792 78007946 -11496607 - MER5B DNA MER1_type -15 163 8 767 276 24 47 chr17 78008010 78008071 -11496482 - MIR SINE MIR -7 255 194 2213 102 3 3 chr17 78008071 78008376 -11496177 - AluSx SINE Alu -7 305 1 767 276 24 47 chr17 78008376 78008568 -11495985 - MIR SINE MIR -68 194 8 2341 67 0 3 chr17 78008661 78008959 -11495594 + AluY SINE Alu 4 300 -11 2385 134 32 11 chr17 78009013 78009462 -11495091 + L1MA5A LINE L1 5848 6630 -27 2100 115 3 37 chr17 78009462 78009785 -11494768 + AluSx SINE Alu 1 312 0 2385 134 32 11 chr17 78009785 78009814 -11494739 + L1MA5A LINE L1 6630 6657 0 270 304 29 29 chr17 78009816 78009954 -11494599 + MER103 DNA DNA 16 153 -13 448 175 262 8 chr17 78010043 78010169 -11494384 - MER5A DNA MER1_type 0 189 32 180 0 0 0 chr17 78010846 78010866 -11493687 + (T)n Simple_repeat Simple_repeat 1 20 0 201 39 0 0 chr17 78012091 78012117 -11492436 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 464 316 41 0 chr17 78012337 78012508 -11492045 - MIR SINE MIR -18 244 67 294 256 105 0 chr17 78012731 78012817 -11491736 - L2 LINE L2 -14 3299 3205 347 173 0 0 chr17 78013063 78013128 -11491425 + AluJ/FLAM SINE Alu 2 57 -245 243 0 0 0 chr17 78013152 78013179 -11491374 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 870 149 29 80 chr17 78013182 78013357 -11491196 + FRAM SINE Alu 1 166 0 2440 190 33 55 chr17 78013491 78014037 -11490516 + L1ME2 LINE L1 5433 5965 -199 2298 99 76 12 chr17 78014037 78014379 -11490174 - THE1B LTR MaLR 0 364 1 2440 190 33 55 chr17 78014379 78014468 -11490085 + L1ME2 LINE L1 5965 6054 -110 363 240 35 122 chr17 78014567 78014705 -11489848 + L1MC4 LINE L1 7833 7981 -61 1826 99 30 46 chr17 78014705 78015007 -11489546 + AluSp SINE Alu 1 297 -16 2302 74 17 0 chr17 78015007 78015304 -11489249 + AluY SINE Alu 1 302 -9 363 240 35 122 chr17 78015304 78015393 -11489160 + L1MC4 LINE L1 7979 8041 -1 396 0 0 0 chr17 78016591 78016635 -11487918 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 396 274 123 25 chr17 78016996 78017178 -11487375 - MIR SINE MIR -65 197 2 229 183 113 42 chr17 78017346 78017417 -11487136 - L1ME4a LINE L1 -76 6045 5970 1242 132 47 0 chr17 78017448 78017661 -11486892 - L1MD3 LINE L1 -15 7980 7758 2342 70 3 46 chr17 78017781 78018108 -11486445 - AluSp SINE Alu 0 313 1 256 276 79 24 chr17 78018240 78018367 -11486186 - L1ME LINE L1 -464 5657 5524 324 120 0 0 chr17 78019116 78019166 -11485387 + (A)n Simple_repeat Simple_repeat 1 50 0 1209 163 31 80 chr17 78019719 78020008 -11484545 + L1MA9 LINE L1 6032 6306 -6 1991 124 0 23 chr17 78021027 78021334 -11483219 + AluSx SINE Alu 1 300 -12 1769 144 0 78 chr17 78022098 78022217 -11482336 - AluJb SINE Alu -17 295 168 2578 63 0 3 chr17 78022217 78022519 -11482034 - AluY SINE Alu -10 301 1 1769 144 0 78 chr17 78022519 78022719 -11481834 - AluJb SINE Alu -144 168 1 2731 102 3 3 chr17 78022811 78023175 -11481378 + THE1B LTR MaLR 1 364 0 330 158 35 0 chr17 78023332 78023389 -11481164 + MIR SINE MIR 86 144 -118 180 259 37 19 chr17 78024243 78024297 -11480256 - L3 LINE CR1 -6 1571 1517 1937 160 0 25 chr17 78024902 78025220 -11479333 + AluJb SINE Alu 1 310 -2 300 112 18 14 chr17 78025226 78025297 -11479256 + L1ME1 LINE L1 6108 6184 0 204 125 0 0 chr17 78026023 78026055 -11478498 + (A)n Simple_repeat Simple_repeat 1 32 0 254 380 185 0 chr17 78026295 78026500 -11478053 - MIR SINE MIR -2 260 18 1115 170 0 28 chr17 78026881 78027093 -11477460 + L1MB5 LINE L1 5844 6049 -125 351 206 11 11 chr17 78027093 78027181 -11477372 + L1MA10 LINE L1 6239 6330 -4 609 160 8 46 chr17 78027190 78027321 -11477232 + L1MB4 LINE L1 6049 6174 -6 414 248 0 29 chr17 78028386 78028491 -11476062 + MIR SINE MIR 44 145 -117 1583 176 8 56 chr17 78028582 78028736 -11475817 + MER47A DNA MER2_type 27 187 -2136 2011 121 6 54 chr17 78028736 78029050 -11475503 + AluSq SINE Alu 1 299 -14 1583 176 8 56 chr17 78029050 78029252 -11475301 + MER47A DNA MER2_type 187 366 0 292 299 64 38 chr17 78030042 78030199 -11474354 - MIR3 SINE MIR -27 181 21 869 114 0 107 chr17 78030376 78030408 -11474145 - FLAM_C SINE Alu -169 133 99 2352 110 3 0 chr17 78030408 78030716 -11473837 + AluSq SINE Alu 4 312 -1 869 114 0 107 chr17 78030716 78030832 -11473721 - FLAM_C SINE Alu -203 99 1 198 103 0 0 chr17 78031144 78031173 -11473380 + (T)n Simple_repeat Simple_repeat 1 29 0 1618 139 102 4 chr17 78031462 78031736 -11472817 + AluJb SINE Alu 1 301 -11 2206 97 0 7 chr17 78031736 78032023 -11472530 + AluSq SINE Alu 1 286 -27 2177 148 2 69 chr17 78032716 78032772 -11471781 + L1MB3 LINE L1 5776 5834 -349 2527 70 0 10 chr17 78032772 78033084 -11471469 + AluY SINE Alu 1 309 -2 2177 148 2 69 chr17 78033084 78033409 -11471144 + L1MB3 LINE L1 5834 6179 -4 872 156 0 15 chr17 78033409 78033544 -11471009 + AluJo/FLAM SINE Alu 1 133 -169 2340 89 13 3 chr17 78033546 78033848 -11470705 + AluSc SINE Alu 1 305 -4 2177 148 2 69 chr17 78033848 78033896 -11470657 + L1MB3 LINE L1 6130 6180 -3 2299 123 7 0 chr17 78034719 78035029 -11469524 - AluSx SINE Alu 0 312 1 545 254 43 30 chr17 78035167 78035359 -11469194 + L1ME3 LINE L1 5968 6160 -2 195 42 0 0 chr17 78035362 78035386 -11469167 + (CATA)n Simple_repeat Simple_repeat 1 24 0 398 311 57 82 chr17 78035656 78035900 -11468653 - L3 LINE CR1 -196 1381 1144 928 140 7 7 chr17 78035913 78036063 -11468490 - MLT1A1 LTR MaLR -215 150 1 2466 87 3 3 chr17 78036098 78036409 -11468144 + AluSp SINE Alu 1 311 -2 701 243 39 17 chr17 78037450 78037631 -11466922 - MIR SINE MIR 0 262 78 234 62 0 0 chr17 78038481 78038513 -11466040 + (CA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr17 78038512 78038535 -11466018 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 2313 104 0 0 chr17 78039720 78040019 -11464534 + AluSg SINE Alu 3 301 -9 422 243 71 30 chr17 78040607 78040776 -11463777 - MIR SINE MIR -1 261 86 2178 112 3 29 chr17 78040950 78041264 -11463289 - AluSx SINE Alu -6 306 1 1836 54 9 14 chr17 78041556 78041777 -11462776 + AluSg/x SINE Alu 76 295 -15 2187 104 0 0 chr17 78042285 78042588 -11461965 + AluSc SINE Alu 1 303 0 472 203 42 15 chr17 78043075 78043209 -11461344 + MLT1I LTR MaLR 309 409 0 848 251 71 76 chr17 78043333 78043739 -11460814 + L2 LINE L2 2868 3271 -1 483 256 123 28 chr17 78044693 78044904 -11459649 + MIR SINE MIR 20 250 -12 270 0 0 0 chr17 78045527 78045557 -11458996 + (TG)n Simple_repeat Simple_repeat 1 30 0 2243 119 7 0 chr17 78046293 78046603 -11457950 - AluSx SINE Alu 0 312 1 561 327 108 5 chr17 78046901 78047124 -11457429 + MIR SINE MIR 2 247 -15 662 195 49 30 chr17 78047219 78047383 -11457170 - MIR SINE MIR -65 197 31 246 32 0 0 chr17 78047860 78047891 -11456662 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 35 0 0 chr17 78049167 78049196 -11455357 + GC_rich Low_complexity Low_complexity 1 29 0 2597 142 16 43 chr17 78049766 78049940 -11454613 + MSTB LTR MaLR 1 178 -248 2160 139 0 10 chr17 78049940 78050250 -11454303 + AluSx SINE Alu 6 312 0 2597 142 16 43 chr17 78050250 78050513 -11454040 + MSTB LTR MaLR 178 426 0 451 309 75 11 chr17 78050636 78050733 -11453820 - MIR SINE MIR -17 245 156 225 0 0 0 chr17 78050733 78050758 -11453795 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 451 309 75 11 chr17 78050758 78050884 -11453669 - MIR SINE MIR -106 156 7 297 294 84 49 chr17 78050858 78050901 -11453652 + L2 LINE L2 1715 1755 -1559 * 388 247 152 57 chr17 78050901 78051059 -11453494 - MER69A DNA AcHobo -4 173 1 297 294 84 49 chr17 78051059 78051383 -11453170 + L2 LINE L2 1755 2095 -1219 349 346 78 15 chr17 78051425 78051630 -11452923 + MIR SINE MIR 20 237 -25 298 324 69 60 chr17 78051943 78052548 -11452005 + L2 LINE L2 2560 3173 -99 7034 34 0 0 chr17 78052598 78053479 -11451074 - L1PA3 LINE L1 -983 5163 4283 7966 19 0 0 chr17 78053479 78054500 -11450053 + L1PA3 LINE L1 5135 6155 0 506 273 76 23 chr17 78054512 78054684 -11449869 + MIR SINE MIR 20 200 -62 1253 224 9 25 chr17 78054699 78055025 -11449528 - MER33 DNA MER1_type 0 324 4 396 233 11 0 chr17 78055031 78055121 -11449432 + MER68 LTR ERV1 357 447 -115 2375 86 0 29 chr17 78055121 78055435 -11449118 - AluSc SINE Alu -4 305 1 2243 123 13 0 chr17 78055435 78055736 -11448817 - AluSx SINE Alu -7 305 1 325 191 88 0 chr17 78055736 78055804 -11448749 + MLT1A1 LTR MaLR 290 363 -2 692 208 68 25 chr17 78055925 78056161 -11448392 + ORSL DNA AcHobo 1 246 -29 2283 131 36 20 chr17 78056501 78056859 -11447694 - THE1B LTR MaLR 0 364 1 202 241 345 0 chr17 78057105 78057192 -11447361 - MIR SINE MIR -71 191 75 949 207 0 0 chr17 78057256 78057420 -11447133 + FRAM SINE Alu 1 164 -2 780 242 43 16 chr17 78057590 78057776 -11446777 + MIR SINE MIR 15 205 -57 1437 217 53 67 chr17 78057778 78058346 -11446207 + MLT1F1 LTR MaLR 8 567 0 241 283 50 0 chr17 78058354 78058414 -11446139 + L2 LINE L2 3251 3313 0 2274 124 0 0 chr17 78059393 78059691 -11444862 - AluSx SINE Alu -14 298 1 1109 35 14 7 chr17 78059919 78060091 -11444462 - AluY SINE Alu 0 314 142 518 160 130 20 chr17 78060316 78060416 -11444137 + FLAM_C SINE Alu 1 111 -32 7215 42 0 1 chr17 78060437 78061338 -11443215 - L1PA5 LINE L1 -1 6153 5254 206 357 12 0 chr17 78062021 78062105 -11442448 + (CA)n Simple_repeat Simple_repeat 1 85 0 * 368 348 11 11 chr17 78062044 78062222 -11442331 + (CACG)n Simple_repeat Simple_repeat 1 178 0 * 480 288 17 6 chr17 78062118 78062295 -11442258 + (CA)n Simple_repeat Simple_repeat 1 179 0 381 252 7 27 chr17 78062269 78062416 -11442137 + (CCCA)n Simple_repeat Simple_repeat 3 146 0 * 505 285 12 6 chr17 78062420 78062585 -11441968 + (CA)n Simple_repeat Simple_repeat 1 166 0 429 222 12 6 chr17 78062693 78062860 -11441693 + (CA)n Simple_repeat Simple_repeat 1 168 0 484 297 23 0 chr17 78062912 78063087 -11441466 + (CA)n Simple_repeat Simple_repeat 1 179 0 196 287 115 11 chr17 78063855 78063942 -11440611 - MIR SINE MIR -66 142 47 478 156 9 46 chr17 78064253 78064362 -11440191 + L1MC3 LINE L1 6990 7094 -691 319 198 23 47 chr17 78064362 78064448 -11440105 + MLT1F1 LTR MaLR 32 115 -452 1954 172 68 98 chr17 78064448 78064980 -11439573 + L1MD3 LINE L1 7396 7910 -85 2466 63 3 3 chr17 78064980 78065279 -11439274 - AluSg SINE Alu -11 299 1 1954 172 68 98 chr17 78065279 78065345 -11439208 + L1MD3 LINE L1 7910 7976 -19 604 158 27 0 chr17 78066102 78066370 -11438183 + (CA)n Simple_repeat Simple_repeat 1 275 0 491 215 6 0 chr17 78066394 78066571 -11437982 + (CA)n Simple_repeat Simple_repeat 1 178 0 441 180 56 22 chr17 78066718 78066807 -11437746 + MIR SINE MIR 43 134 -128 697 228 18 6 chr17 78067737 78067904 -11436649 + MER5A DNA MER1_type 19 187 -2 2336 88 3 10 chr17 78067996 78068302 -11436251 - AluSq SINE Alu -9 304 1 1393 175 141 0 chr17 78068625 78068888 -11435665 - AluJo SINE Alu -2 300 1 247 257 19 86 chr17 78069509 78069614 -11434939 - MIR3 SINE MIR -50 158 61 225 234 31 31 chr17 78069939 78070003 -11434550 + (TATG)n Simple_repeat Simple_repeat 3 66 0 553 156 28 95 chr17 78070883 78071062 -11433491 - ORSL DNA AcHobo -3 272 106 1250 222 46 14 chr17 78071460 78071833 -11432720 - L1MB5 LINE L1 -1 6179 5800 2343 82 3 10 chr17 78072017 78072323 -11432230 - AluSg SINE Alu -2 308 5 1028 153 0 0 chr17 78072333 78072477 -11432076 - AluSx SINE Alu -18 294 151 1019 72 0 8 chr17 78072601 78072726 -11431827 - AluSx SINE Alu -166 146 23 258 30 0 0 chr17 78073461 78073489 -11431064 + (A)n Simple_repeat Simple_repeat 1 29 0 2628 53 0 28 chr17 78073489 78073809 -11430744 + AluY SINE Alu 1 311 0 2468 87 0 3 chr17 78074227 78074536 -11430017 + AluSx SINE Alu 1 308 -4 217 250 0 0 chr17 78075465 78075517 -11429036 + A-rich Low_complexity Low_complexity 3 54 0 648 133 26 9 chr17 78076933 78077046 -11427507 + L1ME1 LINE L1 5853 5967 -199 812 54 0 0 chr17 78077046 78077139 -11427414 + AluS SINE Alu 1 93 -219 372 143 0 0 chr17 78077143 78077199 -11427354 - AluSg/x SINE Alu -176 124 69 181 161 0 0 chr17 78077203 78077234 -11427319 + L2 LINE L2 3219 3249 -23 2443 102 0 3 chr17 78077426 78077739 -11426814 + AluSq SINE Alu 1 312 -1 675 217 83 17 chr17 78078549 78078729 -11425824 + MIR SINE MIR 2 193 -69 2314 95 0 23 chr17 78078736 78079042 -11425511 + AluSq SINE Alu 1 299 -14 2455 96 0 6 chr17 78079591 78079904 -11424649 + AluSq SINE Alu 1 311 -2 182 36 0 36 chr17 78079950 78079978 -11424575 + (CA)n Simple_repeat Simple_repeat 1 27 0 896 62 77 8 chr17 78081235 78081365 -11423188 - MER85 DNA T2_type 0 139 1 213 309 75 11 chr17 78082063 78082157 -11422396 - MIR3 SINE MIR -22 186 87 1891 152 28 0 chr17 78082159 78082442 -11422111 + AluJb SINE Alu 1 291 -21 239 319 110 25 chr17 78084257 78084420 -11420133 + MIR SINE MIR 24 200 -62 232 229 62 52 chr17 78086059 78086155 -11418398 - MIR SINE MIR -71 137 41 2314 128 29 73 chr17 78086366 78086820 -11417733 + Tigger2a DNA MER2_type 1 434 0 1751 172 0 7 chr17 78088665 78088944 -11415609 + AluJo SINE Alu 14 290 -22 332 317 0 0 chr17 78089058 78089159 -11415394 + MIR SINE MIR 54 154 -108 218 327 62 9 chr17 78090037 78090150 -11414403 - L2 LINE L2 -5 3267 3149 241 232 81 30 chr17 78090551 78090650 -11413903 + MLT1K LTR MaLR 483 586 -2 183 349 47 0 chr17 78090740 78090826 -11413727 + MIR SINE MIR 33 122 -140 2614 91 6 6 chr17 78090967 78091331 -11413222 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr17 78092021 78092042 -11412511 + AT_rich Low_complexity Low_complexity 1 21 0 1092 172 0 0 chr17 78092042 78092216 -11412337 - FRAM SINE Alu -2 174 1 2508 31 25 0 chr17 78092638 78092924 -11411629 - AluY SINE Alu -18 293 1 3570 155 23 41 chr17 78093490 78093646 -11410907 + L1MB3 LINE L1 5446 5603 -580 2074 109 0 67 chr17 78093646 78093791 -11410762 + AluSq SINE Alu 1 154 -159 2573 50 0 0 chr17 78093791 78094117 -11410436 + AluY SINE Alu 1 311 0 2074 109 0 67 chr17 78094117 78094301 -11410252 + AluSq SINE Alu 154 308 -5 3570 155 23 41 chr17 78094301 78094893 -11409660 + L1MB3 LINE L1 5603 6180 -3 2063 161 0 0 chr17 78094898 78095208 -11409345 + AluJo SINE Alu 1 310 -2 211 143 0 24 chr17 78095236 78095278 -11409275 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 279 296 123 12 chr17 78096775 78096937 -11407616 - MER5A DNA MER1_type -6 183 4 1056 227 8 12 chr17 78098226 78098477 -11406076 + L1MD3 LINE L1 7746 7995 0 2538 43 7 3 chr17 78098546 78098847 -11405706 + AluY SINE Alu 1 302 -9 513 274 124 19 chr17 78099110 78099369 -11405184 + L1ME4a LINE L1 5634 5919 -202 283 204 0 0 chr17 78100051 78100105 -11404448 - L2 LINE L2 -2 3270 3217 215 200 0 0 chr17 78101553 78101593 -11402960 + (CGGGG)n Simple_repeat Simple_repeat 1 40 0 1526 182 0 111 chr17 78101870 78102310 -11402243 - MLT1C LTR MaLR -76 391 1 1989 95 95 11 chr17 78102521 78102794 -11401759 + AluSg SINE Alu 1 296 -14 2591 162 21 95 chr17 78103508 78104173 -11400380 + L1MC3 LINE L1 6549 7164 -621 1967 146 48 16 chr17 78104171 78104468 -11400085 + L1MC3 LINE L1 7395 7708 -77 * 2291 96 30 28 chr17 78104468 78104831 -11399722 - THE1B LTR MaLR 0 364 1 1967 146 48 16 chr17 78104831 78104910 -11399643 + L1MC3 LINE L1 7708 7783 -2 239 269 64 0 chr17 78105004 78105082 -11399471 - L1 LINE L1 -1306 4840 4758 2167 122 0 0 chr17 78105089 78105376 -11399177 - AluSx SINE Alu -15 297 11 193 315 50 66 chr17 78105621 78105862 -11398691 + L2 LINE L2 2825 3061 -211 491 309 35 5 chr17 78106109 78106310 -11398243 - MIR SINE MIR -20 242 33 256 309 37 0 chr17 78106440 78106521 -11398032 + MIR SINE MIR 171 254 -8 362 208 0 0 chr17 78106624 78106696 -11397857 - MER3 DNA MER1_type -137 72 1 1190 195 66 36 chr17 78106825 78107158 -11397395 - MER2 DNA MER2_type -1 343 1 550 253 102 0 chr17 78107856 78108022 -11396531 - MIR SINE MIR 0 262 80 2383 112 0 0 chr17 78108165 78108477 -11396076 + AluSx SINE Alu 1 312 0 281 285 121 106 chr17 78109042 78109158 -11395395 + LTR16C LTR ERVL 157 270 -221 1867 162 0 34 chr17 78109158 78109479 -11395074 - AluJo SINE Alu -2 310 1 281 285 121 106 chr17 78109479 78109692 -11394861 + LTR16C LTR ERVL 270 491 0 461 276 122 11 chr17 78110630 78110811 -11393742 - L2 LINE L2 0 3313 3113 2168 139 0 7 chr17 78110958 78111268 -11393285 + AluJb SINE Alu 1 308 -4 301 310 40 0 chr17 78112194 78112294 -11392259 - MIR SINE MIR -116 146 43 183 80 0 0 chr17 78112560 78112585 -11391968 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 446 228 60 27 chr17 78112662 78112811 -11391742 - MIR3 SINE MIR -23 185 32 2452 93 0 0 chr17 78113945 78114247 -11390306 + AluSx SINE Alu 1 302 -10 235 340 21 28 chr17 78114324 78114465 -11390088 + L2 LINE L2 2952 3091 -222 381 244 114 15 chr17 78115756 78115887 -11388666 + L2 LINE L2 3159 3302 -11 357 257 151 0 chr17 78115900 78116036 -11388517 - MIR SINE MIR -7 255 101 3261 187 27 31 chr17 78116205 78117008 -11387545 + L1MB7 LINE L1 3411 4210 -1936 3339 159 77 1 chr17 78117008 78117667 -11386886 + L1MB7 LINE L1 5476 6184 0 2247 113 0 0 chr17 78117671 78117962 -11386591 + AluSx SINE Alu 1 291 -21 1703 166 35 10 chr17 78118735 78119024 -11385529 - AluJo SINE Alu -16 296 1 228 111 0 0 chr17 78119034 78119070 -11385483 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2199 99 0 4 chr17 78119076 78119349 -11385204 - AluSc SINE Alu -37 272 1 235 248 45 102 chr17 78119350 78119507 -11385046 + L2 LINE L2 3022 3169 -144 353 259 93 36 chr17 78120041 78120180 -11384373 + MLT1K LTR MaLR 181 327 -261 2065 104 54 0 chr17 78120476 78120755 -11383798 + AluSq SINE Alu 1 294 -19 2334 69 0 21 chr17 78120758 78121079 -11383474 + AluY SINE Alu 1 311 0 2210 128 3 0 chr17 78121637 78121943 -11382610 - AluSx SINE Alu -5 307 1 694 279 37 16 chr17 78121968 78122403 -11382150 - LTR33 LTR ERVL 0 521 1 252 332 55 68 chr17 78123059 78123294 -11381259 + L2 LINE L2 3082 3313 0 818 216 13 73 chr17 78124583 78124770 -11379783 + MER20 DNA MER1_type 2 174 -45 2057 128 3 29 chr17 78124770 78125083 -11379470 + AluSx SINE Alu 1 305 -7 818 216 13 73 chr17 78125083 78125127 -11379426 + MER20 DNA MER1_type 174 219 0 311 236 6 35 chr17 78125903 78126077 -11378476 + (TG)n Simple_repeat Simple_repeat 1 169 0 353 265 66 22 chr17 78126213 78126349 -11378204 + MIR SINE MIR 53 194 -68 439 244 141 0 chr17 78126525 78126681 -11377872 + MIR SINE MIR 69 246 -16 1311 263 30 53 chr17 78126720 78127195 -11377358 + MLT1J LTR MaLR 5 468 -43 2135 115 31 0 chr17 78127202 78127490 -11377063 - AluSx SINE Alu -15 297 1 1001 196 22 0 chr17 78127571 78127755 -11376798 + MER5A DNA MER1_type 1 188 -1 664 227 44 71 chr17 78127764 78127989 -11376564 - MER20 DNA MER1_type 0 219 1 675 247 41 6 chr17 78127998 78128168 -11376385 + MER5B DNA MER1_type 2 177 -1 1935 100 4 29 chr17 78129329 78129608 -11374945 - AluSq SINE Alu -13 300 29 523 235 0 23 chr17 78130257 78130389 -11374164 - Charlie5 DNA MER1_type 0 2623 2495 25 0 0 0 chr17 78180554 78180579 -11323974 + AT_rich Low_complexity Low_complexity 1 25 0 758 192 75 0 chr17 78181821 78181967 -11322586 - MER3 DNA MER1_type 0 209 53 32 103 0 0 chr17 78182202 78182318 -11322235 + AT_rich Low_complexity Low_complexity 1 116 0 7717 38 2 2 chr17 78182847 78183723 -11320830 + L1PA5 LINE L1 5276 6151 -3 9178 30 5 1 chr17 78184193 78185284 -11319269 + L1P LINE L1 4189 5283 -863 604 307 48 48 chr17 78185389 78185702 -11318851 + HERV16 LTR ERVL 525 837 -4159 23 54 0 0 chr17 78186599 78186636 -11317917 + AT_rich Low_complexity Low_complexity 1 37 0 2440 33 0 0 chr17 78187347 78187618 -11316935 + L1PA3 LINE L1 5883 6153 -2 1149 289 48 35 chr17 78188099 78188636 -11315917 + MLT1J-int LTR MaLR 119 662 -709 404 182 11 0 chr17 78189001 78189089 -11315464 + (TATG)n Simple_repeat Simple_repeat 2 90 0 30 45 0 0 chr17 78189107 78189151 -11315402 + AT_rich Low_complexity Low_complexity 1 44 0 1520 259 22 6 chr17 78189434 78189793 -11314760 - MLT1A1 LTR MaLR 0 365 1 235 368 18 18 chr17 78190508 78190622 -11313931 - MIR SINE MIR -137 125 12 190 235 15 15 chr17 78190827 78190895 -11313658 - MER5C DNA MER1_type -37 287 220 192 274 78 0 chr17 78190962 78191013 -11313540 - MER5C DNA MER1_type -269 55 1 1268 275 62 33 chr17 78192050 78192800 -11311753 - L1ME LINE L1 -391 5771 4998 681 260 120 50 chr17 78192797 78193181 -11311372 + L1ME3 LINE L1 5751 6161 -1 * 2419 81 3 0 chr17 78194396 78194704 -11309849 + AluY SINE Alu 1 309 -2 1836 130 39 14 chr17 78195189 78195473 -11309080 + AluJb SINE Alu 1 291 -21 2583 170 31 0 chr17 78195752 78196169 -11308384 + Tigger2a DNA MER2_type 2 431 -3 2200 117 3 3 chr17 78196283 78196591 -11307962 - AluSx SINE Alu -4 308 1 21 0 0 0 chr17 78196714 78196735 -11307818 + AT_rich Low_complexity Low_complexity 1 21 0 469 298 66 28 chr17 78196766 78196947 -11307606 + MIR SINE MIR 53 240 -22 505 318 39 55 chr17 78196975 78197466 -11307087 - HAL1b LINE L1 -660 688 206 2164 132 3 0 chr17 78197606 78197909 -11306644 - AluSx SINE Alu -8 304 1 774 99 0 0 chr17 78198020 78198121 -11306432 + AluY SINE Alu 201 301 -10 3102 107 69 60 chr17 78198347 78198826 -11305727 + L1MA2 LINE L1 5748 6221 -83 1986 125 7 34 chr17 78198826 78199122 -11305431 + AluJb SINE Alu 1 288 -24 216 0 0 0 chr17 78199125 78199149 -11305404 + (TG)n Simple_repeat Simple_repeat 1 24 0 3102 107 69 60 chr17 78199149 78199217 -11305336 + L1MA2 LINE L1 6222 6304 0 23 33 0 0 chr17 78199331 78199361 -11305192 + AT_rich Low_complexity Low_complexity 1 30 0 2259 102 0 3 chr17 78199991 78200295 -11304258 - AluSc SINE Alu -6 303 1 347 240 175 26 chr17 78200568 78200722 -11303831 - MIR SINE MIR -19 243 67 2282 107 0 10 chr17 78200729 78201037 -11303516 + AluSx SINE Alu 1 305 -7 713 258 36 27 chr17 78201267 78201488 -11303065 + MIR SINE MIR 19 241 -21 516 100 71 0 chr17 78202875 78202945 -11301608 - AluSp/q SINE Alu -24 289 215 1652 190 72 3 chr17 78203132 78203464 -11301089 - MLT1A1 LTR MaLR -10 355 1 301 311 91 8 chr17 78203628 78203760 -11300793 + MIR3 SINE MIR 54 196 -12 314 284 142 71 chr17 78204588 78204771 -11299782 + MIR3 SINE MIR 3 198 -10 322 305 0 0 chr17 78205290 78205385 -11299168 - L1MC4 LINE L1 -1339 6703 6609 24 0 0 0 chr17 78205385 78205409 -11299144 + AT_rich Low_complexity Low_complexity 1 24 0 1353 186 81 86 chr17 78205526 78205968 -11298585 - MLT1C LTR MaLR -5 462 23 1805 124 47 15 chr17 78206378 78206652 -11297901 + AluSx SINE Alu 1 283 -29 254 179 18 54 chr17 78206813 78206869 -11297684 + MIR SINE MIR 6 59 -203 342 104 0 0 chr17 78206869 78206917 -11297636 + L1MB2 LINE L1 5933 5980 -191 252 235 16 150 chr17 78207533 78207720 -11296833 + L2 LINE L2 2911 3072 -200 2138 134 0 0 chr17 78207827 78208134 -11296419 - AluSx SINE Alu -5 307 1 1399 103 16 10 chr17 78208855 78209049 -11295504 + AluSg/x SINE Alu 86 280 -32 432 37 0 0 chr17 78209049 78209103 -11295450 + (TAA)n Simple_repeat Simple_repeat 1 54 0 596 322 112 37 chr17 78209298 78209842 -11294711 + L3 LINE CR1 297 881 -696 2109 129 0 3 chr17 78210007 78210302 -11294251 - AluSx SINE Alu -18 294 1 1237 240 109 22 chr17 78211156 78211614 -11292939 - MLT1D LTR MaLR 0 505 8 1872 113 4 0 chr17 78213912 78214168 -11290385 - AluSg SINE Alu -17 293 37 2183 134 0 3 chr17 78215391 78215704 -11288849 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 78215853 78215874 -11288679 + AT_rich Low_complexity Low_complexity 1 21 0 1175 139 6 8 chr17 78217411 78217615 -11286938 + L1MB3 LINE L1 5443 5622 -561 2976 177 24 13 chr17 78217677 78218226 -11286327 + L1MB3 LINE L1 5626 6180 -3 532 284 35 60 chr17 78218355 78218413 -11286140 + L3 LINE CR1 1209 1267 -310 2860 114 0 8 chr17 78218413 78218791 -11285762 + THE1C LTR MaLR 1 375 0 532 284 35 60 chr17 78218791 78218964 -11285589 + L3 LINE CR1 1267 1434 -143 887 188 67 40 chr17 78219009 78219232 -11285321 + MSTB1 LTR MaLR 1 229 -197 213 182 0 0 chr17 78219240 78219273 -11285280 + polypyrimidine Low_complexity Low_complexity 4 36 0 1397 142 9 17 chr17 78219274 78219506 -11285047 + MSTB1 LTR MaLR 203 432 0 2088 133 7 0 chr17 78220653 78220939 -11283614 - AluSq SINE Alu -25 288 1 1938 93 19 0 chr17 78220953 78221212 -11283341 - AluSq SINE Alu -22 291 37 2559 90 0 0 chr17 78222051 78222362 -11282191 + AluSx SINE Alu 1 311 -1 299 85 0 68 chr17 78222415 78222474 -11282079 + Alu SINE Alu 245 299 -1 2833 259 42 40 chr17 78222638 78223686 -11280867 - L2 LINE L2 -33 3280 2228 2062 153 3 0 chr17 78223686 78223994 -11280559 - AluSx SINE Alu -3 309 1 2833 259 42 40 chr17 78223994 78224064 -11280489 - L2 LINE L2 -1085 2228 2160 955 179 10 35 chr17 78224646 78224847 -11279706 - MLT1A1 LTR MaLR 0 365 170 1500 123 0 5 chr17 78224954 78225158 -11279395 - AluSq SINE Alu -110 203 1 2105 106 31 0 chr17 78225849 78226142 -11278411 + AluSx SINE Alu 1 302 -10 2234 172 19 5 chr17 78226174 78226605 -11277948 - L1MB3 LINE L1 -161 6022 5586 232 298 32 0 chr17 78226608 78226702 -11277851 - MER45C DNA AcHobo -140 813 717 251 220 17 0 chr17 78226746 78226805 -11277748 - MER45C DNA AcHobo -893 60 1 187 323 62 0 chr17 78227155 78227220 -11277333 + MIR SINE MIR 72 140 -68 367 89 71 0 chr17 78227397 78227453 -11277100 + MADE1 DNA Mariner 1 60 -20 2317 100 0 25 chr17 78227453 78227772 -11276781 - AluSx SINE Alu -1 311 1 338 288 24 77 chr17 78227826 78227996 -11276557 + MIR SINE MIR 24 184 -78 1759 178 57 10 chr17 78228243 78228631 -11275922 + L1MB7 LINE L1 5634 6039 -145 227 250 0 0 chr17 78228643 78228695 -11275858 + L1MB5 LINE L1 6012 6063 -111 681 199 0 43 chr17 78228704 78228845 -11275708 + AluJo SINE Alu 2 136 -176 470 93 78 147 chr17 78228855 78228918 -11275635 + L1MB7 LINE L1 6065 6116 -68 2106 157 0 3 chr17 78228918 78229231 -11275322 - AluJb SINE Alu 0 312 1 470 93 78 147 chr17 78229231 78229296 -11275257 + L1MB7 LINE L1 6116 6184 0 1840 190 145 11 chr17 78229963 78230405 -11274148 + MLT1D LTR MaLR 1 501 -4 308 265 37 44 chr17 78230668 78230804 -11273749 - L1ME4a LINE L1 -1 6120 5986 2034 97 8 0 chr17 78231178 78231436 -11273117 + AluSq SINE Alu 1 260 -53 2853 88 14 67 chr17 78231536 78231791 -11272762 - L1PB1 LINE L1 -101 6050 5832 510 17 0 0 chr17 78231791 78231850 -11272703 + (TG)n Simple_repeat Simple_repeat 2 60 0 2853 88 14 67 chr17 78231850 78232084 -11272469 - L1PB1 LINE L1 -319 5832 5587 400 269 43 39 chr17 78232216 78232450 -11272103 + HAL1 LINE L1 847 1081 -1426 1844 145 7 10 chr17 78232740 78233029 -11271524 + AluJb SINE Alu 9 296 -16 416 309 0 24 chr17 78233043 78233197 -11271356 + HAL1 LINE L1 1413 1564 -943 854 153 8 0 chr17 78233197 78233328 -11271225 + FLAM_C SINE Alu 1 132 -1 2371 99 0 3 chr17 78233346 78233650 -11270903 + AluSx SINE Alu 3 305 -7 575 202 9 99 chr17 78233847 78234013 -11270540 + L1MB3 LINE L1 5900 6044 -139 1913 169 3 0 chr17 78234013 78234303 -11270250 + AluSx SINE Alu 1 291 -21 575 202 9 99 chr17 78234303 78234349 -11270204 + L1MB3 LINE L1 6044 6093 -90 2328 91 0 0 chr17 78235040 78235336 -11269217 + AluSx SINE Alu 1 296 -16 1315 100 0 6 chr17 78237966 78238136 -11266417 + AluSq SINE Alu 1 169 -144 2382 84 0 3 chr17 78238628 78238924 -11265629 - AluY SINE Alu -16 295 1 2775 85 3 0 chr17 78238974 78239328 -11265225 - THE1A LTR MaLR 0 355 1 1685 199 0 10 chr17 78240470 78240781 -11263772 - AluJo SINE Alu -4 308 1 2160 82 45 0 chr17 78240784 78241077 -11263476 - AluY SINE Alu 0 305 1 900 128 23 8 chr17 78241077 78241210 -11263343 - AluJo SINE Alu -177 135 1 387 311 75 44 chr17 78241394 78241622 -11262931 - L3b LINE CR1 -89 1494 1260 336 367 73 19 chr17 78241878 78242137 -11262416 + L3 LINE CR1 800 1072 -505 1444 193 0 43 chr17 78242368 78242406 -11262147 + MLT1A1 LTR MaLR 1 39 -326 2337 108 0 0 chr17 78242406 78242703 -11261850 + AluSx SINE Alu 1 297 -15 1444 193 0 43 chr17 78242703 78242965 -11261588 + MLT1A1 LTR MaLR 39 288 -77 670 144 158 0 chr17 78243157 78243296 -11261257 + MER20 DNA MER1_type 40 200 -19 2268 98 0 10 chr17 78245335 78245630 -11258923 - AluSx SINE Alu -20 292 1 1904 152 0 42 chr17 78246191 78246245 -11258308 + Tigger2 DNA MER2_type 423 478 -2240 2504 81 3 0 chr17 78246245 78246553 -11258000 + AluSp SINE Alu 5 313 0 1904 152 0 42 chr17 78246553 78246834 -11257719 + Tigger2 DNA MER2_type 478 744 -1974 252 103 0 206 chr17 78246901 78246950 -11257603 + Tigger2 DNA MER2_type 2461 2482 -236 2620 48 0 10 chr17 78246950 78247261 -11257292 + AluY SINE Alu 1 308 -3 252 103 0 206 chr17 78247261 78247308 -11257245 + Tigger2 DNA MER2_type 2482 2537 -181 1062 170 55 0 chr17 78247315 78247515 -11257038 + Tigger2 DNA MER2_type 2498 2708 -10 25 0 0 0 chr17 78247515 78247540 -11257013 + AT_rich Low_complexity Low_complexity 1 25 0 2236 114 3 0 chr17 78247898 78248187 -11256366 + AluSx SINE Alu 7 296 -16 2512 77 0 3 chr17 78249014 78249325 -11255228 + AluY SINE Alu 1 310 -1 311 281 107 87 chr17 78249353 78249838 -11254715 + MLT1L LTR MaLR 41 457 -54 1086 210 52 52 chr17 78249847 78250019 -11254534 - MER58B DNA MER1_type -2103 317 143 2251 122 0 0 chr17 78250019 78250323 -11254230 - AluSx SINE Alu -8 304 1 1086 210 52 52 chr17 78250323 78250459 -11254094 - MER58B DNA MER1_type -2276 144 9 1670 136 0 0 chr17 78250864 78251085 -11253468 + AluSg/x SINE Alu 75 295 -15 1613 265 37 16 chr17 78251085 78251598 -11252955 - L1ME3 LINE L1 -66 6096 5573 2262 108 20 13 chr17 78251675 78251981 -11252572 - AluSx SINE Alu 0 312 5 225 239 60 15 chr17 78252052 78252119 -11252434 + HAL1 LINE L1 10 79 -2428 342 353 125 37 chr17 78252234 78252690 -11251863 + HAL1 LINE L1 201 696 -1811 1680 159 53 82 chr17 78252696 78253150 -11251403 - LTR8A LTR ERV1 0 727 287 718 206 110 147 chr17 78253206 78253498 -11251055 - LTR8 LTR ERV1 -435 256 1 1986 227 114 82 chr17 78253664 78254462 -11250091 - MER21B LTR ERV1 -39 824 1 1037 237 138 63 chr17 78254483 78254888 -11249665 + HAL1 LINE L1 854 1228 -1279 2267 100 0 0 chr17 78254888 78255178 -11249375 + AluSx SINE Alu 1 290 -22 1037 237 138 63 chr17 78255178 78255514 -11249039 + HAL1 LINE L1 1228 1650 -857 2072 134 3 22 chr17 78255720 78256034 -11248519 + AluSg SINE Alu 3 310 0 2301 103 0 3 chr17 78256691 78256991 -11247562 - AluSx SINE Alu -13 299 1 270 0 0 0 chr17 78257377 78257407 -11247146 + (TG)n Simple_repeat Simple_repeat 2 31 0 267 295 74 41 chr17 78258631 78258753 -11245800 + MIR3 SINE MIR 35 160 -48 200 208 0 21 chr17 78259018 78259066 -11245487 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 868 169 0 0 chr17 78260433 78260563 -11243990 + FRAM SINE Alu 16 145 -31 228 35 0 0 chr17 78260563 78260592 -11243961 + (CA)n Simple_repeat Simple_repeat 2 30 0 225 189 19 19 chr17 78260971 78261024 -11243529 - MER58B DNA MER1_type -287 54 2 1637 157 6 92 chr17 78261553 78261890 -11242663 - AluJb SINE Alu -4 308 1 498 309 96 3 chr17 78262448 78262762 -11241791 - L1M4 LINE L1 -3572 2574 2232 1133 196 5 5 chr17 78262958 78263157 -11241396 - AluJb SINE Alu -18 294 96 1191 112 11 17 chr17 78263166 78263344 -11241209 - AluSx SINE Alu -135 177 1 434 250 114 15 chr17 78263344 78263476 -11241077 + MER58B DNA MER1_type 196 340 -1 702 122 12 5 chr17 78263634 78263761 -11240792 + MSTA LTR MaLR 2 134 -241 992 164 50 199 chr17 78263839 78264003 -11240550 - L1MD3 LINE L1 0 7995 7808 1925 119 4 4 chr17 78264003 78264304 -11240249 - AluSx SINE Alu 0 321 21 992 164 50 199 chr17 78264304 78264354 -11240199 - L1MD3 LINE L1 -187 7808 7752 1664 116 142 11 chr17 78264354 78264621 -11239932 - AluSx SINE Alu 0 302 1 992 164 50 199 chr17 78264621 78264886 -11239667 - L1MD3 LINE L1 -243 7752 7586 222 37 0 0 chr17 78265748 78265775 -11238778 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 318 335 49 34 chr17 78268326 78268654 -11235899 - L2 LINE L2 -1020 2294 1962 243 0 0 0 chr17 78269899 78269926 -11234627 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 728 220 5 31 chr17 78269968 78270159 -11234394 + MLT1C LTR MaLR 1 186 -281 1832 186 0 10 chr17 78270159 78270470 -11234083 + AluSx SINE Alu 1 308 -4 446 269 8 46 chr17 78270768 78270898 -11233655 + MER115 DNA AcHobo 162 286 -407 465 285 90 0 chr17 78270952 78271096 -11233457 + MER115 DNA AcHobo 411 567 -126 257 154 34 34 chr17 78271117 78271266 -11233287 + (TA)n Simple_repeat Simple_repeat 1 149 0 221 125 0 21 chr17 78271265 78271313 -11233240 + (GA)n Simple_repeat Simple_repeat 2 48 0 * 526 248 0 0 chr17 78271325 78271430 -11233123 + MER115 DNA AcHobo 589 693 0 1704 148 28 65 chr17 78271649 78271973 -11232580 - AluJo SINE Alu 0 312 1 2315 119 122 10 chr17 78273011 78273396 -11231157 + MSTA LTR MaLR 1 428 0 9053 171 34 4 chr17 78273398 78274998 -11229555 + MSTA-int LTR MaLR 3 1651 0 2387 125 120 5 chr17 78274998 78275382 -11229171 + MSTA LTR MaLR 1 428 0 3890 149 35 18 chr17 78275671 78276389 -11228164 + L1MB7 LINE L1 5375 6104 -80 558 143 0 0 chr17 78276489 78276573 -11227980 + AluJ/FRAM SINE Alu 222 305 -7 705 311 64 8 chr17 78276680 78276915 -11227638 + MIR SINE MIR 15 262 0 633 235 146 87 chr17 78277597 78277977 -11226576 + MER57B LTR ERV1 1 404 -30 2334 73 3 13 chr17 78278017 78278331 -11226222 + AluY SINE Alu 1 311 0 252 184 0 0 chr17 78278656 78278705 -11225848 + MER4-int LTR ERV1 1112 1160 -5438 234 0 0 0 chr17 78279104 78279130 -11225423 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 1600 165 0 45 chr17 78279133 78279424 -11225129 - AluJb SINE Alu -34 278 1 597 247 54 12 chr17 78280214 78280380 -11224173 - MIR SINE MIR -75 187 15 2399 51 0 3 chr17 78281711 78282006 -11222547 + AluY SINE Alu 1 294 -17 324 261 144 20 chr17 78282089 78282242 -11222311 - L1ME LINE L1 -347 5774 5603 287 255 91 14 chr17 78282276 78282464 -11222089 - L1M2 LINE L1 -690 5431 5338 2154 110 0 0 chr17 78282777 78283069 -11221484 - AluSx SINE Alu -12 300 9 7012 178 9 14 chr17 78283070 78285216 -11219337 - L1PA14 LINE L1 0 6161 4029 1033 262 165 16 chr17 78287660 78288102 -11216451 - MLT1J LTR MaLR 0 511 4 257 364 20 36 chr17 78288154 78288349 -11216204 - L2 LINE L2 -455 2859 2668 1776 188 27 33 chr17 78288577 78288944 -11215609 - MLT1A1 LTR MaLR 0 365 1 435 291 63 89 chr17 78289151 78289498 -11215055 + HAL1b LINE L1 77 414 -934 502 204 176 0 chr17 78289866 78289974 -11214579 + FLAM_C SINE Alu 2 128 -5 2331 77 0 10 chr17 78290025 78290335 -11214218 + AluY SINE Alu 1 307 -4 1716 192 43 48 chr17 78290718 78291134 -11213419 - MLT2D LTR ERVL 0 414 1 856 164 6 82 chr17 78291799 78291822 -11212731 - MER33 DNA MER1_type -2414 171 148 1508 176 0 77 chr17 78291822 78292146 -11212407 - AluJo SINE Alu -3 299 1 856 164 6 82 chr17 78292146 78292305 -11212248 - MER33 DNA MER1_type -2437 148 3 524 226 148 7 chr17 78292317 78292472 -11212081 - MER5B DNA MER1_type 0 178 2 331 268 63 24 chr17 78293441 78293568 -11210985 - MLT1K LTR MaLR -395 193 62 1072 251 117 30 chr17 78294087 78294522 -11210031 - MLT1K LTR MaLR -3 473 1 763 326 5 13 chr17 78294886 78295110 -11209443 + MIR SINE MIR 21 242 -20 1982 120 3 0 chr17 78295125 78295408 -11209145 - AluSg SINE Alu -17 293 10 2330 97 0 0 chr17 78296334 78296644 -11207909 - AluSx SINE Alu -2 310 1 722 165 203 28 chr17 78296786 78296968 -11207585 - MER20 DNA MER1_type -3 216 3 273 125 0 0 chr17 78296993 78297033 -11207520 - L2 LINE L2 -24 3289 3250 1419 223 0 16 chr17 78297171 78297480 -11207073 - AluJo SINE Alu -8 304 1 749 194 0 36 chr17 78297480 78297619 -11206934 - AluJo SINE Alu -177 135 2 2178 119 3 0 chr17 78297628 78297991 -11206562 - AluSx SINE Alu 0 364 1 203 298 145 8 chr17 78298099 78298230 -11206323 - L3b LINE CR1 -250 1333 1185 2202 124 39 33 chr17 78298444 78298806 -11205747 + THE1B LTR MaLR 1 364 0 1628 110 13 0 chr17 78300041 78300268 -11204285 - MER30 DNA MER1_type 0 230 1 2376 63 3 0 chr17 78300309 78300609 -11203944 + AluY SINE Alu 1 301 -10 297 225 337 0 chr17 78300697 78300786 -11203767 + L2 LINE L2 3195 3313 0 302 219 104 21 chr17 78300973 78301069 -11203484 - L1MC5 LINE L1 -26 7935 7832 1884 150 3 0 chr17 78302057 78302357 -11202196 + AluJb SINE Alu 5 305 -7 205 323 79 0 chr17 78302498 78302625 -11201928 + MIR SINE MIR 118 254 -8 23 78 0 0 chr17 78302646 78302697 -11201856 + AT_rich Low_complexity Low_complexity 1 51 0 1078 190 18 47 chr17 78302827 78303101 -11201452 + L1MB8 LINE L1 5913 6178 0 946 239 86 54 chr17 78303679 78304030 -11200523 + MLT1D LTR MaLR 1 362 -143 394 189 57 57 chr17 78304033 78304155 -11200398 - MIR SINE MIR -126 136 15 1646 136 27 20 chr17 78304641 78304935 -11199618 + AluJb SINE Alu 1 296 -16 762 247 57 10 chr17 78309694 78309888 -11194665 + MER3 DNA MER1_type 1 203 -6 2009 126 0 0 chr17 78309912 78310238 -11194315 + AluSx SINE Alu 1 326 0 1815 113 4 0 chr17 78311038 78311295 -11193258 - AluJb SINE Alu -16 296 39 307 325 63 40 chr17 78311380 78311506 -11193047 - MIR SINE MIR -111 151 23 211 257 92 64 chr17 78311866 78311919 -11192634 + MIR SINE MIR 35 85 -177 1952 139 0 0 chr17 78311919 78312213 -11192340 - AluJb SINE Alu -18 294 1 211 257 92 64 chr17 78312213 78312268 -11192285 + MIR SINE MIR 85 146 -116 2015 94 11 0 chr17 78312994 78313269 -11191284 - AluSq SINE Alu -35 278 1 325 295 121 13 chr17 78313368 78313517 -11191036 - MIR SINE MIR -18 244 80 5028 76 2 0 chr17 78313938 78314571 -11189982 + MER41B LTR ERV1 2 635 0 336 183 12 37 chr17 78315138 78315220 -11189333 + MER116 DNA Mariner 1 80 0 308 229 124 9 chr17 78315242 78315347 -11189206 - MER103 DNA DNA -48 118 2 260 310 14 0 chr17 78315517 78315588 -11188965 - L2 LINE L2 0 3313 3242 2989 157 109 47 chr17 78316733 78317409 -11187144 + LTR8A LTR ERV1 1 718 -9 227 121 0 0 chr17 78318179 78318212 -11186341 - L1M4 LINE L1 -527 5651 5619 318 283 67 8 chr17 78318216 78318336 -11186217 + L2 LINE L2 2693 2819 -495 285 380 26 9 chr17 78318445 78318558 -11185995 + L2 LINE L2 2967 3081 -191 3101 82 67 19 chr17 78318589 78319053 -11185500 + LTR19A LTR ERV1 1 486 0 226 328 0 0 chr17 78319117 78319175 -11185378 - L2 LINE L2 -16 3297 3240 424 264 126 46 chr17 78319259 78319498 -11185055 - L2 LINE L2 -46 3267 3010 278 284 37 73 chr17 78319494 78319603 -11184950 + L2 LINE L2 3137 3241 -31 * 2926 160 141 21 chr17 78319683 78320309 -11184244 - LTR8A LTR ERV1 -26 701 1 2348 98 0 0 chr17 78320590 78320601 -11183952 - AluY SINE Alu -14 297 287 196 69 0 0 chr17 78320601 78320630 -11183923 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2348 98 0 0 chr17 78320630 78320915 -11183638 - AluY SINE Alu -23 288 1 542 55 0 0 chr17 78321198 78321271 -11183282 + L1MB3 LINE L1 5786 5858 -325 441 156 89 0 chr17 78321271 78321361 -11183192 + MER4A LTR ERV1 1 98 -566 2243 90 0 0 chr17 78321396 78321675 -11182878 - AluSc SINE Alu -7 302 24 1791 129 0 79 chr17 78321716 78322034 -11182519 + MER4A LTR ERV1 372 664 0 1239 135 27 5 chr17 78322034 78322256 -11182297 + L1MB3 LINE L1 5855 6081 -102 889 225 59 28 chr17 78322256 78322545 -11182008 + LTR16B LTR ERVL 165 462 -2 187 288 17 17 chr17 78322859 78322918 -11181635 - MIR SINE MIR 0 262 204 1657 119 126 19 chr17 78322956 78323225 -11181328 + AluSx SINE Alu 1 298 -14 221 337 0 56 chr17 78324492 78324581 -11179972 + L2 LINE L2 3188 3271 -1 2498 98 0 6 chr17 78324657 78324972 -11179581 + AluSq SINE Alu 1 313 0 2203 135 30 28 chr17 78325123 78325486 -11179067 + THE1B LTR MaLR 1 364 0 441 0 0 0 chr17 78325500 78325549 -11179004 + (CA)n Simple_repeat Simple_repeat 2 50 0 180 0 0 0 chr17 78328480 78328500 -11176053 + (A)n Simple_repeat Simple_repeat 1 20 0 287 299 102 45 chr17 78328552 78328709 -11175844 - MIR SINE MIR -21 241 76 236 303 11 22 chr17 78328816 78328905 -11175648 + MIR SINE MIR 105 192 -70 1780 206 49 31 chr17 78329210 78329662 -11174891 + MLT1C LTR MaLR 6 465 -2 199 321 107 18 chr17 78329678 78329710 -11174843 - MIR SINE MIR -28 234 206 471 78 0 0 chr17 78329710 78329774 -11174779 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2204 118 0 0 chr17 78329779 78330067 -11174486 - AluSx SINE Alu -24 288 1 199 321 107 18 chr17 78330067 78330140 -11174413 - MIR SINE MIR -59 203 113 1841 120 71 0 chr17 78331024 78331322 -11173231 + AluSx SINE Alu 1 317 0 336 360 58 0 chr17 78331662 78331887 -11172666 + MER115 DNA AcHobo 5 242 -451 2218 110 3 3 chr17 78332569 78332869 -11171684 + AluSp SINE Alu 2 301 -12 2304 112 13 0 chr17 78333277 78333582 -11170971 - AluY SINE Alu -2 309 1 25 31 0 0 chr17 78333751 78333783 -11170770 + AT_rich Low_complexity Low_complexity 1 32 0 1538 209 31 58 chr17 78333845 78334295 -11170258 + MLT1C LTR MaLR 30 467 0 1533 176 4 0 chr17 78334334 78334572 -11169981 + AluSg/x SINE Alu 71 309 -3 2242 128 0 3 chr17 78334575 78334887 -11169666 + AluSx SINE Alu 1 311 -1 826 167 6 39 chr17 78335031 78335187 -11169366 + MLT1A1 LTR MaLR 215 365 0 268 380 19 60 chr17 78335337 78335553 -11169000 - L2 LINE L2 -956 2358 2152 2097 135 0 0 chr17 78335920 78336223 -11168330 + AluSx SINE Alu 1 303 -9 2471 133 67 10 chr17 78336367 78336705 -11167848 + MSTA LTR MaLR 1 367 -61 2332 92 0 26 chr17 78336705 78337010 -11167543 - AluSg SINE Alu 0 310 14 2471 133 67 10 chr17 78337010 78337076 -11167477 + MSTA LTR MaLR 367 428 0 2276 114 3 0 chr17 78338678 78338977 -11165576 - AluSq SINE Alu -13 300 1 2572 59 3 0 chr17 78339111 78339415 -11165138 - AluY SINE Alu -6 305 1 555 259 17 40 chr17 78339927 78340030 -11164523 - MIR SINE MIR -3 259 160 2486 117 30 8 chr17 78340030 78340397 -11164156 + THE1C LTR MaLR 1 375 0 555 259 17 40 chr17 78340397 78340467 -11164086 - MIR SINE MIR -102 160 90 880 262 97 65 chr17 78340476 78340949 -11163604 - LTR53 LTR ERVL -11 508 21 296 202 12 83 chr17 78340962 78341046 -11163507 - MIR SINE MIR -184 78 1 893 112 0 70 chr17 78341999 78342142 -11162411 - FLAM_C SINE Alu 0 133 1 392 320 28 49 chr17 78342838 78343195 -11161358 + L2 LINE L2 2709 3059 -213 520 159 13 24 chr17 78343198 78343314 -11161239 - MLT1F1 LTR MaLR 0 584 470 409 248 23 45 chr17 78343364 78343497 -11161056 + HAL1 LINE L1 1544 1673 -834 1547 191 88 119 chr17 78343505 78344087 -11160466 - MLT1F1 LTR MaLR 0 567 4 330 317 100 8 chr17 78344220 78344340 -11160213 + L2 LINE L2 3181 3311 -2 436 103 0 0 chr17 78345155 78345213 -11159340 - AluSq SINE Alu -114 199 142 207 233 163 12 chr17 78345675 78345761 -11158792 + MIR SINE MIR 47 145 -117 364 340 97 5 chr17 78346035 78346220 -11158333 - MIR SINE MIR -48 214 13 1560 177 44 73 chr17 78346603 78346820 -11157733 - MLT1A2 LTR MaLR 0 374 171 1821 140 104 0 chr17 78346820 78347098 -11157455 - AluSx SINE Alu -5 307 1 1560 177 44 73 chr17 78347098 78347265 -11157288 - MLT1A2 LTR MaLR -203 171 1 4556 59 19 6 chr17 78347513 78348532 -11156021 + MER11A LTR ERVK 1 1266 0 186 285 55 91 chr17 78348595 78348717 -11155836 - L2 LINE L2 -1256 2058 1948 2484 89 3 0 chr17 78348717 78349021 -11155532 - AluSx SINE Alu -7 305 1 186 285 55 91 chr17 78349021 78349151 -11155402 - L2 LINE L2 -1366 1948 1815 1856 172 27 48 chr17 78349353 78349630 -11154923 + L1MB8 LINE L1 5775 6042 -136 2064 140 0 19 chr17 78349630 78349938 -11154615 - AluSx SINE Alu -10 302 1 1856 172 27 48 chr17 78349938 78350072 -11154481 + L1MB8 LINE L1 6042 6177 -1 527 208 35 15 chr17 78350134 78350292 -11154261 + L1MB7 LINE L1 6019 6177 -1 2266 141 0 0 chr17 78350719 78351032 -11153521 + AluSq SINE Alu 1 313 0 1644 52 0 5 chr17 78352430 78352624 -11151929 - AluY SINE Alu -35 276 84 423 231 103 103 chr17 78353000 78353159 -11151394 + MIR3 SINE MIR 3 164 -44 2128 101 17 3 chr17 78353159 78353447 -11151106 + AluSc SINE Alu 8 299 -10 423 231 103 103 chr17 78353447 78353490 -11151063 + MIR3 SINE MIR 163 205 -3 864 172 17 101 chr17 78403610 78403649 -11100904 - L1MB5 LINE L1 -316 5858 5817 2065 72 48 20 chr17 78403649 78403942 -11100611 - AluY SINE Alu -6 305 5 1675 143 16 33 chr17 78403949 78404256 -11100297 - AluJb SINE Alu -10 302 1 864 172 17 101 chr17 78404256 78404446 -11100107 - L1MB5 LINE L1 -363 5811 5641 703 191 0 22 chr17 78404732 78404868 -11099685 + FLAM_A SINE Alu 1 133 0 186 133 0 0 chr17 78404895 78404925 -11099628 + (T)n Simple_repeat Simple_repeat 1 30 0 419 301 89 39 chr17 78405035 78405098 -11099455 + L2 LINE L2 3042 3100 -213 1868 133 13 10 chr17 78405098 78405400 -11099153 - AluSx SINE Alu -7 305 3 419 301 89 39 chr17 78405400 78405595 -11098958 + L2 LINE L2 3100 3313 0 1353 109 0 0 chr17 78406586 78406770 -11097783 - AluSx SINE Alu -123 189 6 335 352 45 57 chr17 78407381 78407572 -11096981 + L1MEc LINE L1 111 303 -6093 1988 119 16 3 chr17 78407572 78407875 -11096678 + AluSx SINE Alu 1 307 -5 335 352 45 57 chr17 78407875 78408408 -11096145 + L1MEc LINE L1 303 827 -5569 1159 161 5 0 chr17 78408408 78408600 -11095953 + AluSq SINE Alu 1 193 -120 1189 23 0 0 chr17 78408700 78408833 -11095720 - AluY SINE Alu -178 133 1 870 210 101 8 chr17 78409185 78409423 -11095130 - ORSL DNA AcHobo -15 260 1 4196 46 16 0 chr17 78410019 78410536 -11094017 + L1PA5 LINE L1 5546 6070 -84 266 286 55 9 chr17 78410718 78410936 -11093617 + L1MEc LINE L1 1351 1434 -5425 * 2383 249 52 79 chr17 78410922 78412066 -11092487 + L1MEc LINE L1 2113 3225 -3913 1268 169 59 44 chr17 78412232 78412504 -11092049 + MLT1A2 LTR MaLR 1 276 -98 693 103 0 0 chr17 78412620 78412717 -11091836 + AluSg/x SINE Alu 213 309 -1 320 261 72 9 chr17 78412717 78412828 -11091725 + L1ME2 LINE L1 6043 6160 -4 225 0 0 0 chr17 78413198 78413223 -11091330 + (A)n Simple_repeat Simple_repeat 1 25 0 478 196 0 9 chr17 78414278 78414385 -11090168 + MER53 DNA DNA 1 106 -83 210 91 0 0 chr17 78414428 78414461 -11090092 + (TC)n Simple_repeat Simple_repeat 2 34 0 1693 163 24 0 chr17 78414476 78414771 -11089782 + AluJb SINE Alu 1 302 -10 1363 110 5 0 chr17 78414872 78415063 -11089490 + AluSq SINE Alu 105 296 -17 519 95 24 0 chr17 78415087 78415171 -11089382 - L1MA1 LINE L1 -176 6126 6041 345 218 26 13 chr17 78415696 78415774 -11088779 + L2 LINE L2 3235 3313 0 392 320 48 27 chr17 78416125 78416272 -11088281 - MER5B DNA MER1_type -28 150 1 433 231 96 32 chr17 78416483 78416639 -11087914 + MER5A DNA MER1_type 22 187 -2 1745 52 0 0 chr17 78416779 78416990 -11087563 + L1PA5 LINE L1 5939 6149 -5 1359 159 10 42 chr17 78416998 78417287 -11087266 - L1MB5 LINE L1 -8 6166 5887 935 167 0 6 chr17 78417390 78417558 -11086995 + AluSg/x SINE Alu 134 300 -9 22 0 0 0 chr17 78417558 78417580 -11086973 + AT_rich Low_complexity Low_complexity 1 22 0 764 204 45 82 chr17 78417935 78418155 -11086398 + MER58C DNA MER1_type 1 212 -3 297 75 0 0 chr17 78418238 78418278 -11086275 + (CA)n Simple_repeat Simple_repeat 2 41 0 262 279 16 0 chr17 78418451 78418512 -11086041 - L2 LINE L2 -24 3248 3187 319 274 44 9 chr17 78418528 78418641 -11085912 - L2 LINE L2 0 3313 3197 1942 134 7 0 chr17 78418727 78419019 -11085534 + AluSq SINE Alu 1 294 -19 927 108 0 0 chr17 78419407 78419537 -11085016 + AluSq/x SINE Alu 1 130 -182 195 296 23 106 chr17 78419637 78419769 -11084784 + L2 LINE L2 2951 3071 -201 2052 103 0 7 chr17 78421080 78421380 -11083173 - AluSq SINE Alu -7 306 9 264 178 22 0 chr17 78421399 78421444 -11083109 + LTR67 LTR ERVL 33 78 -479 394 196 18 30 chr17 78421568 78421736 -11082817 + CT-rich Low_complexity Low_complexity 6 171 0 642 248 15 40 chr17 78421833 78422031 -11082522 + LTR67 LTR ERVL 361 553 -4 678 244 203 0 chr17 78422099 78422316 -11082237 + LTR50 LTR ERVL 19 279 -516 1931 215 144 30 chr17 78422438 78423099 -11081454 - MER31-int LTR ERV1 -1719 3217 2482 2201 102 3 3 chr17 78423142 78423455 -11081098 - AluSq SINE Alu 0 313 1 548 237 75 44 chr17 78423543 78423713 -11080840 - MER31-int LTR ERV1 -2640 2296 2133 1831 102 49 3 chr17 78423713 78423997 -11080556 - AluSq SINE Alu -14 299 3 548 237 75 44 chr17 78423997 78424463 -11080090 - MER31-int LTR ERV1 -2803 2133 1743 244 244 0 0 chr17 78424465 78424510 -11080043 + MER34 LTR ERV1 1 45 -497 1950 132 0 0 chr17 78424646 78424942 -11079611 - AluSx SINE Alu -16 296 1 490 239 149 0 chr17 78425225 78425359 -11079194 - MER34C LTR ERV1 -273 312 159 837 137 0 0 chr17 78425433 78425564 -11078989 - AluSg/x SINE Alu -17 293 163 649 196 46 0 chr17 78425676 78425829 -11078724 + MLT1E3 LTR MaLR 188 347 -307 2079 119 0 0 chr17 78425906 78426200 -11078353 + AluSx SINE Alu 1 294 -18 1189 234 20 17 chr17 78426225 78426520 -11078033 + MLT1E3 LTR MaLR 315 610 -14 5745 53 6 0 chr17 78426842 78427545 -11077008 - L1PA6 LINE L1 0 6154 5448 1566 163 36 7 chr17 78427905 78428073 -11076480 - AluJo SINE Alu -2 310 128 219 36 0 0 chr17 78428073 78428101 -11076452 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 1566 163 36 7 chr17 78428101 78428233 -11076320 - AluJo SINE Alu -184 128 1 324 217 0 0 chr17 78428304 78428396 -11076157 + (TCTA)n Simple_repeat Simple_repeat 4 95 0 186 43 0 0 chr17 78428419 78428442 -11076111 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 888 124 0 7 chr17 78428868 78429005 -11075548 + THE1B LTR MaLR 3 138 -226 482 296 87 13 chr17 78429116 78429371 -11075182 + L1ME3A LINE L1 5665 5935 -227 362 285 135 52 chr17 78429435 78429628 -11074925 + L1ME3A LINE L1 5962 6170 0 191 294 59 69 chr17 78429924 78430026 -11074527 - L2 LINE L2 -44 3228 3128 396 197 158 26 chr17 78430131 78430283 -11074270 + MLT1H LTR MaLR 3 174 -375 266 263 53 21 chr17 78430253 78430348 -11074205 + MLT1J1 LTR MaLR 78 175 -271 * 2578 184 34 7 chr17 78430416 78430861 -11073692 + MLT2B1 LTR ERVL 1 457 -63 288 349 112 32 chr17 78430915 78431253 -11073300 + L2 LINE L2 2488 2852 -462 1961 199 57 14 chr17 78431360 78431801 -11072752 - MLT1C LTR MaLR -2 465 6 751 254 153 33 chr17 78431806 78432199 -11072354 + MLT1H LTR MaLR 110 549 0 2199 83 3 0 chr17 78432274 78432562 -11071991 - AluSx SINE Alu -23 289 1 1562 198 46 20 chr17 78432564 78432867 -11071686 + Tigger7 DNA MER2_type 2 312 -421 2099 124 0 0 chr17 78432985 78433283 -11071270 - AluSx SINE Alu -14 298 1 1844 130 32 0 chr17 78433287 78433572 -11070981 - AluSx SINE Alu -18 294 1 403 169 0 0 chr17 78433576 78433641 -11070912 - L1PA16 LINE L1 -226 5940 5876 238 284 0 99 chr17 78433646 78433727 -11070826 - MER58 DNA MER1_type -2153 267 195 1159 96 188 20 chr17 78433769 78433966 -11070587 - MER30 DNA MER1_type 0 230 1 1579 173 11 7 chr17 78434563 78434847 -11069706 + AluJo SINE Alu 4 288 -24 2076 116 7 0 chr17 78435764 78436066 -11068487 - AluSx SINE Alu -8 304 1 272 321 42 5 chr17 78436181 78436340 -11068213 + MIR SINE MIR 43 205 -57 1982 120 0 3 chr17 78436536 78436819 -11067734 - AluSx SINE Alu -30 282 1 1354 202 66 13 chr17 78436819 78437121 -11067432 - MLT1A1 LTR MaLR -47 318 1 414 0 0 0 chr17 78437309 78437355 -11067198 + (CA)n Simple_repeat Simple_repeat 2 47 0 820 186 37 37 chr17 78438187 78438337 -11066216 + MER20 DNA MER1_type 29 181 -38 1839 154 3 3 chr17 78438337 78438636 -11065917 + AluJb SINE Alu 1 299 -13 820 186 37 37 chr17 78438636 78438673 -11065880 + MER20 DNA MER1_type 180 216 -3 431 251 77 56 chr17 78438803 78438998 -11065555 - L2 LINE L2 -1 3312 3114 245 227 0 0 chr17 78439083 78439127 -11065426 - MIR SINE MIR -32 230 187 213 39 0 0 chr17 78440022 78440048 -11064505 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 213 203 0 54 chr17 78440366 78440440 -11064113 + CT-rich Low_complexity Low_complexity 2 71 0 1711 109 4 12 chr17 78441391 78441647 -11062906 - AluSx SINE Alu -2 310 57 1929 133 6 19 chr17 78442651 78442966 -11061587 - AluSx SINE Alu -1 311 1 644 295 145 44 chr17 78444083 78444565 -11059988 - MLT1H LTR MaLR 0 549 19 1987 141 0 0 chr17 78444788 78445092 -11059461 + AluSx SINE Alu 1 304 -8 961 136 0 19 chr17 78445092 78445246 -11059307 + AluSg/x SINE Alu 132 282 -28 3347 158 21 15 chr17 78445257 78445820 -11058733 + L1PB1 LINE L1 4781 5359 -792 2209 116 0 0 chr17 78445820 78446131 -11058422 + AluSx SINE Alu 1 311 -1 3347 158 21 15 chr17 78446131 78446566 -11057987 + L1PB1 LINE L1 5359 5790 -361 270 0 0 0 chr17 78446577 78446607 -11057946 + (TA)n Simple_repeat Simple_repeat 1 30 0 2384 126 6 6 chr17 78446607 78446973 -11057580 + L1PB1 LINE L1 5782 6147 -4 380 191 71 0 chr17 78447233 78447317 -11057236 - MER103 DNA DNA -69 97 8 256 362 0 9 chr17 78447539 78447644 -11056909 + MER5B DNA MER1_type 3 106 -72 397 278 174 7 chr17 78447764 78447908 -11056645 + MER5A DNA MER1_type 21 188 -1 753 110 0 0 chr17 78447937 78448037 -11056516 + AluS SINE Alu 2 101 -211 2172 182 49 2 chr17 78448138 78448545 -11056008 + MSTB LTR MaLR 1 426 0 1609 82 30 59 chr17 78449184 78449363 -11055190 - L1MA1 LINE L1 0 6302 6131 1719 155 0 28 chr17 78449363 78449680 -11054873 + AluSx SINE Alu 1 309 0 1609 82 30 59 chr17 78449680 78449769 -11054784 - L1MA1 LINE L1 -171 6131 6041 637 156 0 0 chr17 78449769 78449878 -11054675 - L1MB2 LINE L1 -117 6054 5946 228 67 0 0 chr17 78449881 78449911 -11054642 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1323 106 0 0 chr17 78449914 78450093 -11054460 - AluSg/x SINE Alu -25 287 109 775 151 0 43 chr17 78450122 78450250 -11054303 + AluSq/x SINE Alu 2 125 -188 656 183 0 23 chr17 78450250 78450381 -11054172 + L1MB2 LINE L1 6044 6171 0 1915 131 0 32 chr17 78451607 78451920 -11052633 - AluSx SINE Alu -9 303 1 2224 99 0 10 chr17 78452537 78452851 -11051702 - AluSx SINE Alu -1 311 1 1097 280 33 46 chr17 78452895 78453262 -11051291 - L1MB2 LINE L1 -380 5790 5436 2066 131 0 6 chr17 78453262 78453576 -11050977 + AluSq SINE Alu 1 312 -1 1097 280 33 46 chr17 78453576 78453877 -11050676 - L1MB2 LINE L1 -734 5436 5133 277 105 0 0 chr17 78453881 78453919 -11050634 + MER5B DNA MER1_type 16 53 -125 1215 199 111 14 chr17 78454027 78454404 -11050149 + LTR50 LTR ERVL 298 793 -2 1866 19 0 0 chr17 78454431 78454640 -11049913 + L1PA3 LINE L1 5947 6155 0 794 218 0 6 chr17 78455145 78455319 -11049234 - MER104 DNA Tc2 -7 173 1 396 265 197 27 chr17 78455320 78455467 -11049086 - MIR SINE MIR -68 194 23 1001 215 11 29 chr17 78455726 78456179 -11048374 - MLT1D LTR MaLR 0 505 1 2078 102 0 0 chr17 78456867 78457142 -11047411 + AluSx SINE Alu 1 275 -37 1249 62 0 11 chr17 78457146 78457324 -11047229 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 1290 231 65 19 chr17 78457324 78457649 -11046904 - MLT1A2 LTR MaLR -34 340 1 1643 118 76 8 chr17 78458050 78458341 -11046212 - AluSx SINE Alu 0 309 1 550 292 43 28 chr17 78458503 78458825 -11045728 - L1PB4 LINE L1 -272 5884 5558 281 333 90 14 chr17 78459417 78459561 -11044992 - MER5B DNA MER1_type -18 160 6 2139 118 0 3 chr17 78460104 78460417 -11044136 - AluSq SINE Alu -1 312 1 294 257 76 9 chr17 78461305 78461410 -11043143 - HAL1 LINE L1 -1910 597 486 345 273 105 7 chr17 78461414 78461557 -11042996 - HAL1 LINE L1 -2083 424 268 238 272 194 28 chr17 78461600 78461780 -11042773 - HAL1 LINE L1 -2297 210 1 2051 145 0 0 chr17 78461921 78462231 -11042322 - AluSx SINE Alu 0 312 3 1232 169 15 30 chr17 78462250 78462517 -11042036 - L1MD3 LINE L1 -2 7993 7731 428 293 8 23 chr17 78463042 78463175 -11041378 + MIR3 SINE MIR 73 203 -5 444 277 124 28 chr17 78463751 78463928 -11040625 - MIR SINE MIR -58 204 11 980 92 8 0 chr17 78464132 78464263 -11040290 - AluSq/x SINE Alu -181 132 1 1883 147 0 3 chr17 78464426 78464739 -11039814 - AluSx SINE Alu 0 312 1 3708 155 22 50 chr17 78465400 78465933 -11038620 + L1MC1 LINE L1 5610 6118 -215 2012 145 0 0 chr17 78465933 78466243 -11038310 + AluSx SINE Alu 1 310 -2 3708 155 22 50 chr17 78466243 78466446 -11038107 + L1MC1 LINE L1 6118 6325 -8 1184 214 5 0 chr17 78466464 78466684 -11037869 - MLT1D LTR MaLR 0 505 285 277 119 0 51 chr17 78466973 78467032 -11037521 - LTR49-int LTR ERV1 -6741 796 741 1295 178 36 53 chr17 78467096 78467399 -11037154 + AluJb SINE Alu 1 298 -14 450 294 68 52 chr17 78467766 78467892 -11036661 - LTR49-int LTR ERV1 -4150 2181 2058 2208 105 0 0 chr17 78467892 78468198 -11036355 + AluSx SINE Alu 1 306 -6 450 294 68 52 chr17 78468198 78468323 -11036230 - LTR49-int LTR ERV1 -4273 2058 1926 671 211 145 14 chr17 78468347 78468581 -11035972 - MER57A LTR ERV1 0 510 132 625 146 52 0 chr17 78468603 78468699 -11035854 + AluJ SINE Alu 11 111 -201 1107 157 26 5 chr17 78468740 78468931 -11035622 + AluJ SINE Alu 108 302 -10 1912 118 0 0 chr17 78469533 78469796 -11034757 - AluSx SINE Alu -10 302 40 412 273 83 0 chr17 78469813 78469945 -11034608 + L2 LINE L2 3168 3310 -3 2107 108 10 0 chr17 78469973 78470278 -11034275 - AluSg SINE Alu -2 308 1 949 291 4 13 chr17 78470666 78470903 -11033650 + MIR SINE MIR 28 262 0 22 0 0 0 chr17 78471097 78471119 -11033434 + AT_rich Low_complexity Low_complexity 1 22 0 509 188 0 0 chr17 78471152 78471248 -11033305 - AluSg/x SINE Alu -7 302 207 1930 99 0 4 chr17 78471360 78471622 -11032931 + AluSx SINE Alu 1 261 -51 343 291 63 63 chr17 78471748 78472205 -11032348 - HAL1 LINE L1 -1167 1340 884 346 263 32 11 chr17 78472290 78472385 -11032168 - MIR SINE MIR -59 203 107 2021 130 0 0 chr17 78472485 78472785 -11031768 - AluSx SINE Alu -12 300 1 229 254 61 9 chr17 78472815 78472929 -11031624 + L2 LINE L2 2357 2476 -838 1166 224 174 12 chr17 78473055 78473376 -11031177 + MLT1C LTR MaLR 95 467 0 249 324 125 28 chr17 78473405 78473596 -11030957 + L2 LINE L2 2499 2715 -599 2147 113 0 3 chr17 78473596 78473898 -11030655 + AluSx SINE Alu 1 301 -11 249 324 125 28 chr17 78473898 78473922 -11030631 + L2 LINE L2 2715 2735 -579 482 281 5 0 chr17 78474066 78474208 -11030345 - L1ME LINE L1 -353 5809 5661 621 288 40 71 chr17 78474840 78475099 -11029454 - L1ME LINE L1 -2144 5664 5421 756 158 8 0 chr17 78475099 78475219 -11029334 - FLAM_C SINE Alu -12 121 1 621 288 40 71 chr17 78475219 78475382 -11029171 - L1ME LINE L1 -2387 5421 5255 354 328 21 42 chr17 78475458 78475650 -11028903 - L1ME LINE L1 -1007 5139 4952 226 346 10 0 chr17 78475655 78475759 -11028794 - L1ME LINE L1 -1161 4985 4881 1273 183 10 30 chr17 78475842 78476142 -11028411 + MER33 DNA MER1_type 12 305 -19 2096 115 0 3 chr17 78476142 78476438 -11028115 - AluSg1 SINE Alu -14 295 1 261 313 50 65 chr17 78476568 78477073 -11027480 - L1ME LINE L1 -1446 4700 4204 271 333 0 0 chr17 78477591 78477675 -11026878 - L1MC/D LINE L1 -2214 5594 5511 2362 127 5 11 chr17 78477815 78478192 -11026361 - THE1C LTR MaLR 0 375 1 593 246 143 83 chr17 78478462 78478918 -11025635 + L2 LINE L2 2822 3304 -9 267 236 0 0 chr17 78478918 78478990 -11025563 + GA-rich Low_complexity Low_complexity 1 72 0 985 205 169 84 chr17 78479713 78480228 -11024325 - MLT1E2 LTR MaLR -4 650 14 2360 77 0 3 chr17 78480302 78480612 -11023941 - AluSc SINE Alu 0 309 1 358 161 0 238 chr17 78480850 78480988 -11023565 + Charlie1 DNA MER1_type 3 96 -2665 2377 76 0 0 chr17 78480988 78481292 -11023261 - AluY SINE Alu -7 304 1 358 161 0 238 chr17 78481292 78481321 -11023232 + Charlie1 DNA MER1_type 96 130 -2631 1486 146 5 0 chr17 78481486 78481706 -11022847 - MLT1A1 LTR MaLR 0 365 145 819 114 0 8 chr17 78481725 78481848 -11022705 - AluSp/q SINE Alu -15 298 177 2201 160 20 0 chr17 78481978 78482334 -11022219 + MER47A DNA MER2_type 3 365 -1 3227 124 58 35 chr17 78483100 78483188 -11021365 + MER1A DNA MER1_type 1 85 -2615 2437 58 0 0 chr17 78483188 78483499 -11021054 - AluY SINE Alu 0 311 1 3227 124 58 35 chr17 78483499 78483924 -11020629 + MER1A DNA MER1_type 85 526 -1 270 0 0 0 chr17 78484001 78484031 -11020522 + (GA)n Simple_repeat Simple_repeat 2 31 0 267 250 11 34 chr17 78486169 78486257 -11018296 + CT-rich Low_complexity Low_complexity 2 87 0 22 0 0 0 chr17 78486433 78486455 -11018098 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr17 78487937 78487968 -11016585 + (CA)n Simple_repeat Simple_repeat 1 31 0 198 0 0 0 chr17 78487967 78487989 -11016564 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 191 215 77 77 chr17 78488575 78488640 -11015913 + MIR SINE MIR 187 251 -11 296 280 64 32 chr17 78489818 78489975 -11014578 - MLT1J LTR MaLR -6 505 344 1826 148 3 10 chr17 78490197 78490495 -11014058 - AluJb SINE Alu -16 296 1 314 217 0 14 chr17 78490513 78490582 -11013971 + MLT1A1 LTR MaLR 1 68 -297 441 274 19 0 chr17 78490583 78490689 -11013864 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3978 120 62 58 chr17 78490680 78490735 -11013818 + Tigger3(Golem) DNA MER2_type 2277 2330 -698 2100 113 3 0 chr17 78490735 78491035 -11013518 - AluSx SINE Alu -11 301 1 3978 120 62 58 chr17 78491035 78491727 -11012826 + Tigger3(Golem) DNA MER2_type 2330 3027 -1 273 83 0 0 chr17 78491728 78491764 -11012789 + MLT1A1 LTR MaLR 68 103 -262 2123 108 3 0 chr17 78491877 78492174 -11012379 - AluSx SINE Alu -14 298 1 387 140 0 0 chr17 78493044 78493101 -11011452 + MER58A DNA MER1_type 27 83 -24 231 114 0 0 chr17 78493104 78493139 -11011414 + (A)n Simple_repeat Simple_repeat 1 35 0 775 181 111 6 chr17 78493244 78493415 -11011138 + MER5A DNA MER1_type 1 189 0 2259 102 0 0 chr17 78494133 78494438 -11010115 - AluSx SINE Alu -7 305 1 1049 204 195 30 chr17 78494502 78494835 -11009718 + MLT1C LTR MaLR 1 388 -79 995 155 21 16 chr17 78494951 78495145 -11009408 + AluJb SINE Alu 106 300 -12 914 279 37 63 chr17 78495148 78495306 -11009247 + MER57-int LTR ERV1 2090 2251 -5286 1629 169 13 20 chr17 78495306 78495607 -11008946 + AluJb SINE Alu 1 299 -13 914 279 37 63 chr17 78495607 78495808 -11008745 + MER57-int LTR ERV1 2251 2456 -5081 1976 106 13 119 chr17 78495808 78496185 -11008368 - MER1B DNA MER1_type 0 337 1 914 279 37 63 chr17 78496185 78496542 -11008011 + MER57-int LTR ERV1 2456 5761 -1776 1098 117 6 22 chr17 78496597 78496776 -11007777 + AluSg/x SINE Alu 137 312 0 180 152 0 0 chr17 78497214 78497247 -11007306 + A-rich Low_complexity Low_complexity 1 33 0 211 233 0 0 chr17 78497650 78497693 -11006860 - MIR SINE MIR -141 67 25 2299 89 0 0 chr17 78498251 78498554 -11005999 + AluSx SINE Alu 1 303 -9 633 220 142 64 chr17 78499232 78499548 -11005005 + MLT1H LTR MaLR 141 522 -27 349 332 30 40 chr17 78499579 78499781 -11004772 + MLT1K LTR MaLR 23 222 -366 821 275 5 18 chr17 78499834 78500052 -11004501 + MLT1K LTR MaLR 374 588 0 549 314 15 20 chr17 78500248 78500452 -11004101 + MLT1J LTR MaLR 1 203 -308 236 284 151 59 chr17 78501855 78502246 -11002307 + L2 LINE L2 2551 2977 -337 260 269 130 9 chr17 78502442 78502550 -11002003 + L2 LINE L2 3179 3299 -14 330 317 122 50 chr17 78502965 78503186 -11001367 + L3b LINE CR1 1336 1572 -11 804 174 0 114 chr17 78503695 78503735 -11000818 - MER5B DNA MER1_type 0 178 135 2346 117 51 14 chr17 78503735 78504086 -11000467 + THE1B LTR MaLR 1 364 0 804 174 0 114 chr17 78504086 78504246 -11000307 - MER5B DNA MER1_type -43 135 1 1089 200 23 9 chr17 78504765 78504985 -10999568 - MER58A DNA MER1_type 0 224 2 196 353 0 0 chr17 78505039 78505107 -10999446 + L2 LINE L2 3204 3271 -1 1974 127 0 0 chr17 78506026 78506329 -10998224 + AluSx SINE Alu 1 303 0 2150 82 0 4 chr17 78507446 78507726 -10996827 - AluSg SINE Alu -31 279 1 379 232 0 0 chr17 78507726 78507795 -10996758 - L3b LINE CR1 -234 1349 1281 342 250 10 19 chr17 78508398 78508502 -10996051 - MIR3 SINE MIR -38 170 68 266 351 36 18 chr17 78508515 78508626 -10995927 + MIR3 SINE MIR 47 159 -49 667 253 76 68 chr17 78508639 78508700 -10995853 + MIR SINE MIR 9 68 -194 2080 114 0 0 chr17 78508700 78508989 -10995564 + AluSx SINE Alu 1 289 -23 667 253 76 68 chr17 78508989 78509176 -10995377 + MIR SINE MIR 68 259 -3 210 71 0 0 chr17 78509920 78509948 -10994605 + (T)n Simple_repeat Simple_repeat 1 28 0 663 195 200 27 chr17 78510005 78510190 -10994363 - MER20 DNA MER1_type -2 217 1 1694 161 0 32 chr17 78510447 78510757 -10993796 - AluSp SINE Alu -13 300 1 201 173 19 39 chr17 78510992 78511044 -10993509 + T-rich Low_complexity Low_complexity 2 52 0 301 104 5 10 chr17 78511076 78511128 -10993425 + Alu SINE Alu 5 42 -258 334 90 6 17 chr17 78511774 78511834 -10992719 - Alu SINE Alu -259 42 1 287 241 80 27 chr17 78512729 78512841 -10991712 + MLT1D LTR MaLR 8 125 -380 2008 126 23 0 chr17 78512841 78513142 -10991411 + AluSx SINE Alu 1 308 -4 45 0 0 18 chr17 78513324 78513368 -10991185 + AT_rich Low_complexity Low_complexity 1 45 -10 1106 258 0 13 chr17 78513368 78513674 -10990879 + AluSx SINE Alu 1 302 0 45 0 0 18 chr17 78513674 78513685 -10990868 + AT_rich Low_complexity Low_complexity 45 55 0 1363 188 49 52 chr17 78513705 78513771 -10990782 - AluJo SINE Alu -11 291 226 1942 79 34 0 chr17 78513771 78514037 -10990516 - AluSp SINE Alu -8 305 31 1363 188 49 52 chr17 78514037 78514258 -10990295 - AluJo SINE Alu -76 226 5 876 225 17 0 chr17 78514693 78514866 -10989687 + MER45 DNA AcHobo 8 183 -857 733 183 15 8 chr17 78514861 78514992 -10989561 + MER45 DNA AcHobo 1449 1580 -1 * 1866 163 153 44 chr17 78515099 78515361 -10989192 - MLT1D LTR MaLR -7 498 266 1651 166 7 13 chr17 78515361 78515669 -10988884 - AluSx SINE Alu -6 306 1 1866 163 153 44 chr17 78515669 78515836 -10988717 - MLT1D LTR MaLR -239 266 22 550 158 133 0 chr17 78515910 78516030 -10988523 - MER69 DNA AcHobo -3 2523 2388 281 333 33 8 chr17 78516382 78516502 -10988051 + L2 LINE L2 3150 3272 0 2388 78 0 3 chr17 78516818 78517126 -10987427 + AluSx SINE Alu 3 309 -3 2198 91 3 0 chr17 78517187 78517483 -10987070 + AluY SINE Alu 1 297 -14 7432 44 6 0 chr17 78517483 78518918 -10985635 + L1PA5 LINE L1 4714 6153 -1 2140 141 0 0 chr17 78519140 78519439 -10985114 + AluSx SINE Alu 1 299 -13 1021 266 174 20 chr17 78519453 78519941 -10984612 - L2 LINE L2 0 3313 2682 2225 134 0 0 chr17 78519941 78520247 -10984306 - AluSx SINE Alu -6 306 1 1021 266 174 20 chr17 78520247 78520425 -10984128 - L2 LINE L2 -631 2682 2533 280 327 20 0 chr17 78520689 78520790 -10983763 + L2 LINE L2 3210 3312 -1 777 96 0 0 chr17 78520960 78521064 -10983489 - LTR8 LTR ERV1 -3 688 585 3344 121 11 49 chr17 78521254 78521308 -10983245 - LTR8 LTR ERV1 -112 579 524 2088 102 67 0 chr17 78521308 78521592 -10982961 - AluSx SINE Alu -9 303 1 3344 121 11 49 chr17 78521592 78521881 -10982672 - LTR8 LTR ERV1 -167 524 264 2169 136 7 0 chr17 78521881 78522190 -10982363 - AluSx SINE Alu -1 311 1 3344 121 11 49 chr17 78522190 78522416 -10982137 - LTR8 LTR ERV1 -427 264 31 456 107 0 0 chr17 78522436 78522511 -10982042 - Alu SINE Alu 0 309 235 486 88 0 0 chr17 78522514 78522582 -10981971 - Alu SINE Alu -7 303 236 2211 121 0 0 chr17 78522585 78522883 -10981670 - AluSx SINE Alu -14 298 1 294 95 0 0 chr17 78523029 78523071 -10981482 + (GA)n Simple_repeat Simple_repeat 1 42 0 2286 121 0 0 chr17 78523511 78523816 -10980737 - AluSq SINE Alu -8 305 1 492 250 181 20 chr17 78524078 78524282 -10980271 + MIR SINE MIR 20 256 -6 332 362 97 26 chr17 78524701 78525041 -10979512 - L2 LINE L2 -405 2909 2546 460 180 28 133 chr17 78525080 78525108 -10979445 - L1MC5 LINE L1 -32 7929 7900 2189 115 0 16 chr17 78525108 78525412 -10979141 + AluSx SINE Alu 1 299 -13 460 180 28 133 chr17 78525412 78525491 -10979062 - L1MC5 LINE L1 -61 7900 7852 1604 156 41 37 chr17 78525491 78525786 -10978767 - AluJo SINE Alu -16 296 1 460 180 28 133 chr17 78525786 78525888 -10978665 - L1MC5 LINE L1 -109 7852 7741 626 252 13 0 chr17 78526224 78526375 -10978178 - MER53 DNA DNA -2 187 35 2530 64 0 0 chr17 78526375 78526672 -10977881 - AluY SINE Alu -14 297 1 583 234 24 36 chr17 78526672 78526692 -10977861 + MER53 DNA DNA 162 181 -8 452 194 90 52 chr17 78526788 78526855 -10977698 + MER5A DNA MER1_type 1 64 -125 1893 131 3 61 chr17 78526855 78527183 -10977370 + AluSx SINE Alu 1 309 -3 452 194 90 52 chr17 78527183 78527270 -10977283 + MER5A DNA MER1_type 64 161 -28 358 132 104 0 chr17 78528181 78528264 -10976289 - MER5A DNA MER1_type -91 98 5 2326 88 0 49 chr17 78528874 78529202 -10975351 - AluSx SINE Alu 0 312 1 436 305 152 0 chr17 78529225 78529376 -10975177 - MER5A DNA MER1_type -3 186 13 2242 106 36 0 chr17 78532024 78532325 -10972228 - AluSx SINE Alu 0 312 1 486 191 26 17 chr17 78533145 78533260 -10971293 + L1MB3 LINE L1 5922 6037 -146 1474 123 0 14 chr17 78533262 78533474 -10971079 - AluSg/x SINE Alu 0 312 104 2006 171 0 0 chr17 78533500 78533810 -10970743 - AluSx SINE Alu -2 310 1 801 175 0 0 chr17 78533850 78533993 -10970560 - L1MB3 LINE L1 -295 5888 5746 1180 240 72 81 chr17 78534091 78534674 -10969879 - L1ME3A LINE L1 -51 6119 5542 2032 161 13 0 chr17 78534685 78534984 -10969569 - AluSq SINE Alu -10 303 1 1040 91 8 0 chr17 78534990 78535122 -10969431 - AluSq/x SINE Alu -180 133 1 193 140 20 100 chr17 78535790 78535840 -10968713 + L2 LINE L2 3251 3296 -17 2075 153 3 3 chr17 78535884 78536191 -10968362 - AluJb SINE Alu -4 308 2 1030 240 100 54 chr17 78536191 78536819 -10967734 - L1MC5 LINE L1 -42 7919 7263 577 237 35 29 chr17 78537010 78537183 -10967370 + Charlie2 DNA MER1_type 49 222 -2640 690 215 66 129 chr17 78537268 78537312 -10967241 + Charlie2 DNA MER1_type 1858 1903 -959 2230 114 0 16 chr17 78537312 78537619 -10966934 - AluSx SINE Alu -10 302 1 690 215 66 129 chr17 78537619 78537969 -10966584 + Charlie2 DNA MER1_type 1903 2227 -635 261 0 0 0 chr17 78538966 78538995 -10965558 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 317 339 174 17 chr17 78539164 78539400 -10965153 - L1MC4a LINE L1 -340 5781 5628 240 35 0 0 chr17 78539477 78539506 -10965047 + (TG)n Simple_repeat Simple_repeat 2 30 0 3299 104 29 12 chr17 78539760 78540239 -10964314 - LTR45B LTR ERV1 0 489 3 2081 69 0 55 chr17 78541866 78542176 -10962377 + AluSx SINE Alu 24 318 0 2262 113 8 53 chr17 78542591 78542780 -10961773 - MLT1B LTR MaLR -7 383 220 1827 126 0 4 chr17 78542780 78543035 -10961518 - AluJb SINE Alu -22 290 37 2262 113 8 53 chr17 78543035 78543243 -10961310 - MLT1B LTR MaLR -170 220 4 2390 97 0 0 chr17 78543485 78543783 -10960770 + AluSq SINE Alu 1 298 -15 182 282 0 0 chr17 78543945 78543984 -10960569 - L2 LINE L2 -1871 1443 1405 1182 114 68 55 chr17 78544008 78544227 -10960326 + MER46A DNA MER2_type 5 226 -10 1109 178 120 92 chr17 78544251 78544587 -10959966 - MLT1C LTR MaLR -48 419 69 2267 105 10 0 chr17 78544587 78544882 -10959671 - AluSx SINE Alu -14 298 1 1109 178 120 92 chr17 78544882 78544945 -10959608 - MLT1C LTR MaLR -398 69 9 2137 89 0 51 chr17 78546575 78546890 -10957663 - AluSx SINE Alu -1 311 13 2154 150 0 26 chr17 78547038 78547384 -10957169 + MER1B DNA MER1_type 1 337 0 306 50 0 0 chr17 78547619 78547659 -10956894 + (T)n Simple_repeat Simple_repeat 1 40 0 1699 176 0 4 chr17 78547840 78548113 -10956440 - AluSx SINE Alu -6 306 35 449 206 10 0 chr17 78548222 78548319 -10956234 - L1M4 LINE L1 -2044 4102 4005 403 292 6 4 chr17 78548375 78548561 -10955992 + MIR SINE MIR 1 262 0 1456 54 11 0 chr17 78548778 78549012 -10955541 + L1PA7 LINE L1 5950 6185 0 401 239 11 0 chr17 78549107 78549199 -10955354 + MIR SINE MIR 167 259 -3 448 301 7 22 chr17 78549523 78549659 -10954894 + L3 LINE CR1 1432 1565 -12 296 261 73 42 chr17 78551926 78552091 -10952462 - MER20 DNA MER1_type -22 197 28 258 391 75 0 chr17 78552105 78552279 -10952274 + MER91A DNA MER1_type 10 196 0 303 220 0 0 chr17 78552387 78552446 -10952107 + L2 LINE L2 3213 3271 -1 317 23 0 23 chr17 78553454 78553497 -10951056 + (TG)n Simple_repeat Simple_repeat 2 43 0 1949 140 0 44 chr17 78553943 78554258 -10950295 + AluSx SINE Alu 1 301 -11 227 280 21 32 chr17 78554551 78554644 -10949909 + MARNA DNA Mariner 20 111 -475 383 336 36 33 chr17 78555352 78555626 -10948927 - MLT1I LTR MaLR -35 374 100 254 222 97 0 chr17 78555792 78555864 -10948689 - MER2 DNA MER2_type -266 79 1 2455 87 0 0 chr17 78556282 78556582 -10947971 - AluSg SINE Alu -10 300 1 1757 183 3 7 chr17 78557142 78557442 -10947111 - AluJb SINE Alu -13 299 1 759 90 63 0 chr17 78558315 78558426 -10946127 - AluSg/x SINE Alu -2 308 191 849 195 23 0 chr17 78558526 78558700 -10945853 - MLT1D LTR MaLR -301 204 27 2018 143 13 0 chr17 78558731 78559038 -10945515 + AluSx SINE Alu 1 311 -1 2092 132 17 0 chr17 78559649 78559944 -10944609 + AluSx SINE Alu 1 300 -12 610 140 159 0 chr17 78560581 78560688 -10943865 - FLAM_A SINE Alu -5 128 5 411 293 57 52 chr17 78560838 78560880 -10943673 + MIR SINE MIR 44 84 -178 2184 133 27 12 chr17 78560880 78561212 -10943341 + MER1B DNA MER1_type 1 337 0 411 293 57 52 chr17 78561212 78561381 -10943172 + MIR SINE MIR 84 256 -6 648 302 40 22 chr17 78561426 78561651 -10942902 + L3 LINE CR1 1236 1464 -113 2188 126 7 7 chr17 78561664 78561966 -10942587 + AluSx SINE Alu 1 302 -10 1190 134 27 54 chr17 78561967 78562191 -10942362 - MER20 DNA MER1_type -1 218 1 2085 141 6 35 chr17 78563894 78564241 -10940312 + MER1B DNA MER1_type 1 337 0 2238 122 0 0 chr17 78564289 78564584 -10939969 + AluSx SINE Alu 1 295 -17 2242 117 0 0 chr17 78565036 78565335 -10939218 - AluSx SINE Alu -13 299 1 1816 161 3 32 chr17 78567030 78567340 -10937213 - AluJo SINE Alu -11 301 1 633 106 32 8 chr17 78567594 78567624 -10936929 + CT-rich Low_complexity Low_complexity 5 33 -97 2001 125 36 13 chr17 78567624 78567929 -10936624 - AluSq SINE Alu -1 312 1 633 106 32 8 chr17 78567929 78568021 -10936532 + CT-rich Low_complexity Low_complexity 33 130 0 1949 147 10 16 chr17 78568024 78568338 -10936215 - AluSx SINE Alu 0 312 1 1852 129 0 58 chr17 78569155 78569465 -10935088 + AluSx SINE Alu 1 292 -20 1515 172 0 61 chr17 78570084 78570380 -10934173 - MLT1B LTR MaLR 0 390 113 1997 119 6 13 chr17 78570382 78570694 -10933859 + AluSg SINE Alu 1 310 0 436 218 0 0 chr17 78570725 78570803 -10933750 - AluJ/FLAM SINE Alu -233 79 2 551 149 11 32 chr17 78570835 78570929 -10933624 - MLT1B LTR MaLR -298 92 1 2156 116 0 0 chr17 78571547 78571858 -10932695 - AluSq SINE Alu -2 311 1 1833 130 45 7 chr17 78572544 78572836 -10931717 + AluSg SINE Alu 1 303 -7 215 238 0 0 chr17 78572895 78572937 -10931616 + L2 LINE L2 3171 3212 -60 1532 103 0 0 chr17 78573190 78573393 -10931160 + AluSg SINE Alu 1 203 -107 247 291 256 0 chr17 78573565 78573682 -10930871 + L2 LINE L2 3164 3310 -3 1807 148 28 3 chr17 78575109 78575400 -10929153 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 78576870 78576895 -10927658 + AT_rich Low_complexity Low_complexity 1 25 0 2311 96 56 17 chr17 78576942 78577297 -10927256 - L1PB1 LINE L1 0 6151 5783 355 310 0 0 chr17 78577298 78577385 -10927168 - L1MC4 LINE L1 -1342 6700 6614 * 384 289 0 0 chr17 78577345 78577435 -10927118 + L1MC4 LINE L1 6614 6703 -1339 6525 160 12 12 chr17 78577444 78578076 -10926477 - L1P5 LINE L1 -360 5791 5160 306 0 0 0 chr17 78578076 78578110 -10926443 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1853 151 0 0 chr17 78578112 78578403 -10926150 - AluSx SINE Alu -21 291 1 6525 160 12 12 chr17 78578403 78579612 -10924941 - L1P5 LINE L1 -992 5159 3948 554 210 21 43 chr17 78579615 78579669 -10924884 + Charlie2 DNA MER1_type 2427 2481 -381 1913 133 10 13 chr17 78579669 78579970 -10924583 + AluSx SINE Alu 1 300 -12 554 210 21 43 chr17 78579970 78580101 -10924452 + Charlie2 DNA MER1_type 2481 2608 -254 394 183 0 43 chr17 78580170 78580263 -10924290 + Charlie2 DNA MER1_type 2598 2686 -176 2080 100 6 34 chr17 78580268 78580588 -10923965 + AluSx SINE Alu 1 311 -1 324 127 0 0 chr17 78580623 78580678 -10923875 + (CCTA)n Simple_repeat Simple_repeat 1 55 0 502 179 28 9 chr17 78580698 78580804 -10923749 + Charlie2 DNA MER1_type 2711 2818 -44 2166 103 0 0 chr17 78580805 78581105 -10923448 - AluY SINE Alu -7 304 5 1863 101 0 4 chr17 78581326 78581584 -10922969 - AluSx SINE Alu -53 259 3 1846 142 23 7 chr17 78581993 78582296 -10922257 + AluSx SINE Alu 1 308 -4 314 227 184 76 chr17 78582488 78582673 -10921880 + MIR3 SINE MIR 3 207 -1 1913 117 0 54 chr17 78582787 78583103 -10921450 + AluSx SINE Alu 1 299 -13 1622 156 4 149 chr17 78583230 78583420 -10921133 + MLT1B LTR MaLR 1 217 -173 2262 82 0 3 chr17 78583420 78583725 -10920828 + AluY SINE Alu 1 304 -7 1622 156 4 149 chr17 78583725 78583814 -10920739 + MLT1B LTR MaLR 217 192 -198 1573 142 64 37 chr17 78583814 78584109 -10920444 + AluJo SINE Alu 1 303 -9 1622 156 4 149 chr17 78584109 78584284 -10920269 + MLT1B LTR MaLR 191 390 0 306 206 96 0 chr17 78584314 78584387 -10920166 - MIR3 SINE MIR -16 192 113 2479 44 0 0 chr17 78584559 78584857 -10919696 + AluY SINE Alu 1 298 -13 470 283 155 30 chr17 78585275 78585636 -10918917 + L1ME4a LINE L1 5715 6120 -1 2304 122 114 3 chr17 78586559 78586652 -10917901 + MSTC LTR MaLR 1 82 -346 1859 159 3 0 chr17 78586652 78586948 -10917605 + AluJb SINE Alu 1 297 -15 2304 122 114 3 chr17 78586948 78587239 -10917314 + MSTC LTR MaLR 82 428 0 1429 142 119 78 chr17 78587659 78588019 -10916534 + THE1C LTR MaLR 1 375 0 1753 172 0 3 chr17 78588557 78588853 -10915700 + AluSx SINE Alu 1 295 -17 2111 116 3 3 chr17 78589278 78589579 -10914974 + AluSx SINE Alu 1 301 -11 606 214 18 0 chr17 78589857 78589969 -10914584 + MER81 DNA DNA 1 114 0 1062 186 0 0 chr17 78590071 78590259 -10914294 + AluJb SINE Alu 121 308 -4 1957 155 0 0 chr17 78590272 78590568 -10913985 + AluSx SINE Alu 1 296 -16 1160 161 23 18 chr17 78590926 78591144 -10913409 - MER20 DNA MER1_type 0 219 1 1957 130 3 0 chr17 78591250 78591549 -10913004 + AluJb SINE Alu 6 305 -7 198 0 0 0 chr17 78591817 78591839 -10912714 + (A)n Simple_repeat Simple_repeat 1 22 0 258 277 44 102 chr17 78592087 78592224 -10912329 + HsTC2 DNA Tc2 7 135 -1763 323 314 107 6 chr17 78592241 78592410 -10912143 + HsTC2 DNA Tc2 1274 1459 -439 609 182 0 33 chr17 78592418 78592539 -10912014 + MER5A DNA MER1_type 2 118 -71 1929 143 3 0 chr17 78592539 78592847 -10911706 + AluSx SINE Alu 1 309 -3 180 277 34 50 chr17 78592847 78592858 -10911695 - MER5A DNA MER1_type -107 82 72 465 154 0 0 chr17 78592858 78592949 -10911604 + GA-rich Low_complexity Low_complexity 2 92 0 1015 92 5 33 chr17 78592950 78593134 -10911419 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 279 253 76 0 chr17 78593137 78593216 -10911337 + MER5A DNA MER1_type 105 189 0 690 228 53 106 chr17 78593276 78593562 -10910991 + HsTC2 DNA Tc2 1485 1742 -156 1879 140 31 0 chr17 78593562 78593854 -10910699 - AluSx SINE Alu -11 301 1 690 228 53 106 chr17 78593854 78594001 -10910552 + HsTC2 DNA Tc2 1742 1895 -3 224 360 188 13 chr17 78594001 78594240 -10910313 - L3b LINE CR1 -186 1397 1117 1861 123 7 19 chr17 78594441 78594749 -10909804 - AluSx SINE Alu -4 308 5 353 259 76 46 chr17 78595341 78595472 -10909081 + L2 LINE L2 3165 3299 -14 1780 148 7 0 chr17 78595590 78595921 -10908632 - AluJb SINE Alu 0 333 1 225 293 177 22 chr17 78596222 78596454 -10908099 - L3 LINE CR1 -235 1342 1075 312 175 0 0 chr17 78596621 78596684 -10907869 + CT-rich Low_complexity Low_complexity 4 66 0 1716 153 3 30 chr17 78596714 78597009 -10907544 + AluJo SINE Alu 1 287 -25 207 0 0 0 chr17 78597012 78597035 -10907518 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 228 256 11 67 chr17 78597070 78597160 -10907393 - L1ME4a LINE L1 -102 6019 5935 180 231 0 0 chr17 78597160 78597212 -10907341 + (CATA)n Simple_repeat Simple_repeat 3 54 0 527 321 26 60 chr17 78597372 78597588 -10906965 - L1MC4a LINE L1 -1899 5909 5687 2360 95 0 0 chr17 78597588 78597894 -10906659 - AluSx SINE Alu -6 306 1 816 156 0 15 chr17 78597898 78598033 -10906520 - FLAM_C SINE Alu 0 133 1 527 321 26 60 chr17 78598033 78598229 -10906324 - L1MC4a LINE L1 -2124 5684 5506 217 193 277 12 chr17 78598404 78598487 -10906066 + MIR SINE MIR 115 219 -43 2377 71 0 13 chr17 78598538 78598849 -10905704 - AluY SINE Alu -4 307 1 2196 79 45 0 chr17 78600286 78600577 -10903976 - AluY SINE Alu -7 304 1 2209 107 0 0 chr17 78600812 78601112 -10903441 + AluSx SINE Alu 1 300 -12 2751 154 9 43 chr17 78601435 78601761 -10902792 + L1MB5 LINE L1 5649 5951 -223 2136 115 7 0 chr17 78601761 78602066 -10902487 + AluSx SINE Alu 1 307 -5 2751 154 9 43 chr17 78602066 78602277 -10902276 + L1MB5 LINE L1 5951 6168 -6 856 142 0 8 chr17 78602282 78602416 -10902137 - FLAM_C SINE Alu 0 133 1 26 0 0 0 chr17 78602421 78602447 -10902106 + AT_rich Low_complexity Low_complexity 1 26 0 571 163 11 0 chr17 78602447 78602539 -10902014 - FRAM SINE Alu -21 155 63 443 204 167 0 chr17 78602761 78602893 -10901660 + L2 LINE L2 3160 3313 0 3244 179 28 7 chr17 78602960 78603576 -10900977 + L1MB2 LINE L1 5536 6164 -7 472 62 15 0 chr17 78604061 78604126 -10900427 - MER41A LTR ERV1 -89 465 400 861 199 34 85 chr17 78604185 78604256 -10900297 + MER58A DNA MER1_type 1 74 -2346 2235 91 0 0 chr17 78604256 78604553 -10900000 + AluSx SINE Alu 1 297 -15 861 199 34 85 chr17 78604553 78604717 -10899836 + MER58A DNA MER1_type 74 224 0 225 125 0 0 chr17 78605549 78605567 -10898986 + (GA)n Simple_repeat Simple_repeat 2 19 -22 1937 147 0 3 chr17 78605567 78605873 -10898680 + AluJo SINE Alu 1 305 -7 225 125 0 0 chr17 78605873 78605894 -10898659 + (GA)n Simple_repeat Simple_repeat 18 41 0 202 258 0 65 chr17 78606364 78606426 -10898127 + L2 LINE L2 3244 3301 -12 328 169 45 45 chr17 78606489 78606578 -10897975 + MER53 DNA DNA 1 89 -100 318 287 30 10 chr17 78606632 78606733 -10897820 - MIR SINE MIR -129 133 31 850 246 105 33 chr17 78606923 78607359 -10897194 + MLT1J LTR MaLR 8 511 0 2127 104 16 0 chr17 78608059 78608367 -10896186 + AluSq SINE Alu 1 313 0 778 304 54 54 chr17 78608434 78608753 -10895800 - LTR67 LTR ERVL -3 554 232 1902 121 11 0 chr17 78608753 78609065 -10895488 - AluSx SINE Alu 0 315 1 778 304 54 54 chr17 78609065 78609297 -10895256 - LTR67 LTR ERVL -324 233 2 2199 114 0 0 chr17 78609459 78609765 -10894788 - AluSx SINE Alu -5 307 2 511 154 0 0 chr17 78610250 78610328 -10894225 + AluS SINE Alu 5 82 -231 1385 144 0 0 chr17 78610549 78610764 -10893789 + AluSg/x SINE Alu 96 310 -2 489 321 54 0 chr17 78610783 78610951 -10893602 + MIR SINE MIR 86 262 0 2001 112 4 0 chr17 78611625 78611902 -10892651 + AluSx SINE Alu 1 278 -34 894 155 0 67 chr17 78612421 78612459 -10892094 + L1MA9 LINE L1 6132 6171 -141 2252 111 0 0 chr17 78612459 78612766 -10891787 + AluSx SINE Alu 1 307 -5 894 155 0 67 chr17 78612766 78612921 -10891632 + L1MA9 LINE L1 6171 6312 0 2303 66 0 10 chr17 78613762 78614066 -10890487 - AluY SINE Alu -10 301 1 2102 113 10 0 chr17 78614597 78614897 -10889656 - AluSx SINE Alu -9 303 1 27 62 0 0 chr17 78614934 78614982 -10889571 + AT_rich Low_complexity Low_complexity 1 48 0 1444 106 10 0 chr17 78615105 78615312 -10889241 + AluSg/x SINE Alu 92 300 -12 1060 200 77 39 chr17 78615349 78615634 -10888919 + MLT1C LTR MaLR 146 441 -26 261 0 0 0 chr17 78615648 78615677 -10888876 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 210 369 0 0 chr17 78615722 78615787 -10888766 + A-rich Low_complexity Low_complexity 1 65 0 37 23 0 0 chr17 78615787 78615831 -10888722 + AT_rich Low_complexity Low_complexity 1 44 0 30 77 0 0 chr17 78616078 78616143 -10888410 + AT_rich Low_complexity Low_complexity 1 65 0 246 150 0 0 chr17 78616243 78616283 -10888270 + Alu SINE Alu 255 294 -5 1920 226 87 70 chr17 78616288 78616526 -10888027 - HAL1 LINE L1 -72 2435 2203 1520 107 190 43 chr17 78616526 78616853 -10887700 - THE1C LTR MaLR 0 375 1 1920 226 87 70 chr17 78616853 78617023 -10887530 - HAL1 LINE L1 -304 2203 2037 2052 126 0 0 chr17 78617023 78617316 -10887237 - AluSx SINE Alu -19 293 1 1920 226 87 70 chr17 78617316 78617651 -10886902 - HAL1 LINE L1 -470 2037 1678 1157 212 69 150 chr17 78617652 78618077 -10886476 + MLT1F LTR MaLR 1 368 -174 2479 97 33 28 chr17 78618077 78618439 -10886114 + THE1B LTR MaLR 1 364 0 1157 212 69 150 chr17 78618439 78618593 -10885960 + MLT1F LTR MaLR 368 533 -9 1234 274 108 27 chr17 78618599 78618793 -10885760 - HAL1 LINE L1 -837 1670 1493 2541 52 0 0 chr17 78618793 78619084 -10885469 - AluY SINE Alu -20 291 1 1234 274 108 27 chr17 78619084 78619437 -10885116 - HAL1 LINE L1 -1014 1493 1079 1917 107 0 0 chr17 78619437 78619680 -10884873 - AluSx SINE Alu -12 300 58 243 321 35 86 chr17 78619721 78619999 -10884554 - L2 LINE L2 -815 2499 2243 1725 180 31 3 chr17 78619999 78620293 -10884260 - AluJb SINE Alu -10 302 1 243 321 35 86 chr17 78620293 78620385 -10884168 - L2 LINE L2 -1071 2243 2148 1659 122 35 20 chr17 78620415 78620669 -10883884 + AluSg SINE Alu 42 299 -11 300 27 0 0 chr17 78620672 78620709 -10883844 + (CA)n Simple_repeat Simple_repeat 2 38 0 856 173 0 9 chr17 78620715 78620950 -10883603 + GA-rich Low_complexity Low_complexity 1 232 0 2458 75 0 0 chr17 78621224 78621516 -10883037 + AluY SINE Alu 1 292 -19 1430 175 68 71 chr17 78621604 78621970 -10882583 + MLT1A1 LTR MaLR 1 365 0 363 305 47 0 chr17 78622398 78622526 -10882027 + MIR SINE MIR 60 193 -69 2665 101 0 3 chr17 78623013 78623378 -10881175 - THE1B LTR MaLR 0 364 1 1488 192 39 90 chr17 78624177 78624475 -10880078 - MLT1C LTR MaLR -56 411 99 2228 197 100 21 chr17 78624475 78624993 -10879560 + MER89 LTR ERV1 1 559 0 1488 192 39 90 chr17 78624993 78625033 -10879520 - MLT1C LTR MaLR -368 99 59 2108 119 23 16 chr17 78625033 78625343 -10879210 - AluSx SINE Alu 0 312 1 1488 192 39 90 chr17 78625343 78625436 -10879117 - MLT1C LTR MaLR -408 59 1 829 179 0 6 chr17 78625617 78625773 -10878780 + MER89 LTR ERV1 341 495 -64 196 373 69 0 chr17 78626012 78626114 -10878439 + L2 LINE L2 3161 3269 -3 219 220 0 0 chr17 78626287 78626337 -10878216 + (TG)n Simple_repeat Simple_repeat 2 51 0 273 349 86 7 chr17 78626340 78626609 -10877944 + L2 LINE L2 1668 1957 -1357 183 80 0 0 chr17 78626676 78626701 -10877852 + (TC)n Simple_repeat Simple_repeat 1 25 0 567 259 16 62 chr17 78627080 78627226 -10877327 + MER5A DNA MER1_type 6 142 -47 1992 129 27 3 chr17 78627226 78627521 -10877032 + AluSc SINE Alu 1 302 -7 567 259 16 62 chr17 78627521 78627567 -10876986 + MER5A DNA MER1_type 142 189 0 375 211 14 0 chr17 78628035 78628106 -10876447 - Tigger2 DNA MER2_type -10 2708 2637 1207 311 0 99 chr17 78628107 78628441 -10876112 - AluSx SINE Alu -1 301 1 344 185 31 0 chr17 78628441 78628506 -10876047 + MLT1A2 LTR MaLR 308 374 0 2462 74 0 10 chr17 78628622 78628931 -10875622 + AluY SINE Alu 1 306 -5 1863 85 0 0 chr17 78629616 78629840 -10874713 - AluSq SINE Alu -89 224 1 1935 136 7 0 chr17 78630009 78630289 -10874264 + AluSx SINE Alu 24 305 -7 268 91 0 23 chr17 78630628 78630672 -10873881 - MLT1D LTR MaLR 0 505 463 1399 184 14 31 chr17 78630672 78630960 -10873593 + AluSx SINE Alu 1 283 -29 290 98 229 0 chr17 78631026 78631087 -10873466 + Alu SINE Alu 4 78 -223 566 232 0 0 chr17 78631213 78631351 -10873202 + AluSp/q SINE Alu 162 299 -14 2115 95 7 0 chr17 78631364 78631637 -10872916 + AluY SINE Alu 17 291 -20 695 199 152 13 chr17 78633673 78633904 -10870649 - MER33 DNA MER1_type -4 320 58 2189 104 7 7 chr17 78633906 78634215 -10870338 - AluSq SINE Alu -4 309 1 1052 136 60 0 chr17 78634238 78634422 -10870131 - L1PB4 LINE L1 -2 6154 5960 646 197 8 0 chr17 78635380 78635497 -10869056 + FLAM_C SINE Alu 5 122 -21 209 377 74 0 chr17 78636117 78636239 -10868314 - MIR SINE MIR -57 205 75 1884 126 19 35 chr17 78637184 78637501 -10867052 + AluSx SINE Alu 1 312 0 2599 59 3 0 chr17 78637651 78637955 -10866598 + AluY SINE Alu 1 305 -6 272 174 0 29 chr17 78638047 78638116 -10866437 - MADE1 DNA Mariner -1 79 13 361 39 20 0 chr17 78638248 78638299 -10866254 - AluY SINE Alu -250 52 1 2396 70 3 0 chr17 78638310 78638617 -10865936 - AluSp SINE Alu 0 308 1 2473 60 0 7 chr17 78638619 78638918 -10865635 - AluY SINE Alu -14 297 1 1019 194 40 8 chr17 78638947 78639203 -10865350 + AluJb SINE Alu 1 301 -11 445 277 0 9 chr17 78639203 78639315 -10865238 - MER3 DNA MER1_type -80 129 19 1192 91 0 0 chr17 78639545 78639688 -10864865 + AluSq/x SINE Alu 1 143 -169 1923 118 75 0 chr17 78639689 78639968 -10864585 + AluSx SINE Alu 1 300 -12 2209 120 0 0 chr17 78640089 78640388 -10864165 - AluSx SINE Alu -13 299 1 233 213 0 0 chr17 78640509 78640556 -10863997 - MIR3 SINE MIR -11 197 151 184 239 65 0 chr17 78641508 78641554 -10862999 + MIR SINE MIR 105 153 -55 2285 117 0 22 chr17 78641599 78641915 -10862638 - AluSx SINE Alu -3 309 1 2289 104 3 3 chr17 78642193 78642490 -10862063 + AluSg SINE Alu 3 299 -11 2390 57 10 24 chr17 78642914 78643212 -10861341 - AluY SINE Alu -17 294 1 1020 152 12 12 chr17 78643227 78643391 -10861162 + AluJb SINE Alu 132 295 -17 328 364 18 6 chr17 78643400 78643565 -10860988 + MIR SINE MIR 84 250 -12 2204 130 0 0 chr17 78644395 78644714 -10859839 + AluSx SINE Alu 1 312 0 1142 75 118 0 chr17 78644905 78645066 -10859487 + AluSp SINE Alu 119 298 -15 2425 107 0 0 chr17 78645177 78645486 -10859067 + AluSx SINE Alu 1 309 -3 193 240 70 90 chr17 78645688 78645788 -10858765 - MIR SINE MIR -62 146 49 370 330 188 21 chr17 78646375 78646486 -10858067 - L2 LINE L2 -108 3205 3114 2366 98 0 0 chr17 78646486 78646782 -10857771 - AluSc SINE Alu -13 296 1 2289 111 10 0 chr17 78646786 78647119 -10857434 - AluSx SINE Alu 0 336 1 370 330 188 21 chr17 78647119 78647149 -10857404 - L2 LINE L2 -201 3112 3088 1809 159 13 22 chr17 78647149 78647464 -10857089 + AluJb SINE Alu 1 312 0 370 330 188 21 chr17 78647464 78647926 -10856627 - L2 LINE L2 -225 3088 2498 2042 122 4 0 chr17 78647928 78648199 -10856354 + AluSx SINE Alu 1 272 -40 898 127 0 0 chr17 78648301 78648419 -10856134 - AluSq/x SINE Alu -194 119 2 333 179 0 15 chr17 78648419 78648486 -10856067 + MLT1A1 LTR MaLR 297 362 -3 819 194 40 50 chr17 78648646 78648802 -10855751 - MER20 DNA MER1_type -1 218 63 1976 112 3 40 chr17 78648802 78649105 -10855448 + AluJb SINE Alu 1 292 -20 819 194 40 50 chr17 78649105 78649149 -10855404 - MER20 DNA MER1_type -156 63 20 245 62 0 203 chr17 78649183 78649206 -10855347 - MADE1 DNA Mariner -2 78 74 2086 109 63 0 chr17 78649206 78649490 -10855063 + AluSx SINE Alu 1 302 -10 245 62 0 203 chr17 78649490 78649530 -10855023 - MADE1 DNA Mariner -6 74 28 2313 95 17 0 chr17 78649568 78649864 -10854689 + AluSg SINE Alu 1 301 -9 243 0 0 0 chr17 78649896 78649923 -10854630 + (A)n Simple_repeat Simple_repeat 1 27 0 364 303 0 10 chr17 78650306 78650405 -10854148 - L2 LINE L2 0 3272 3175 288 216 40 0 chr17 78650410 78650484 -10854069 + ORSL DNA AcHobo 32 108 -167 2361 94 3 0 chr17 78650505 78650812 -10853741 - AluSg SINE Alu -2 308 1 461 150 12 0 chr17 78650813 78650893 -10853660 + ORSL DNA AcHobo 171 251 -24 1760 146 60 0 chr17 78651100 78651367 -10853186 + AluJo SINE Alu 1 283 -29 199 317 200 7 chr17 78651468 78651613 -10852940 - L2 LINE L2 -844 2470 2298 1335 208 35 31 chr17 78651628 78651946 -10852607 + MLT1A2 LTR MaLR 1 319 -55 1247 114 29 0 chr17 78651947 78652122 -10852431 - AluSg/x SINE Alu -5 305 126 1955 153 3 7 chr17 78653243 78653551 -10851002 - AluJb SINE Alu -5 307 1 2145 128 3 13 chr17 78653556 78653862 -10850691 - AluSx SINE Alu -9 303 1 2085 108 76 0 chr17 78654572 78654860 -10849693 + AluSx SINE Alu 1 310 -2 2558 71 3 3 chr17 78654865 78655176 -10849377 + AluY SINE Alu 1 311 0 1842 136 7 42 chr17 78656096 78656404 -10848149 - AluJo SINE Alu -15 297 1 421 326 38 21 chr17 78657970 78658185 -10846368 + MIR SINE MIR 10 234 -28 800 187 0 32 chr17 78658190 78658345 -10846208 + FRAM SINE Alu 27 176 0 210 279 0 15 chr17 78658354 78658422 -10846131 + MIR SINE MIR 193 259 -3 617 176 19 0 chr17 78658665 78658773 -10845780 - MLT1B LTR MaLR -280 110 1 906 148 8 0 chr17 78658798 78658926 -10845627 + AluSq/x SINE Alu 1 129 -184 232 230 0 100 chr17 78658929 78659029 -10845524 - L1MC4 LINE L1 -1339 6703 6614 304 261 14 0 chr17 78659031 78659100 -10845453 + L1MCa LINE L1 1995 2064 -4362 * 404 253 0 22 chr17 78659082 78659173 -10845380 - L1MC4 LINE L1 -1340 6702 6614 226 238 48 0 chr17 78659173 78659257 -10845296 - L1MC4 LINE L1 -1341 6701 6614 1096 123 86 0 chr17 78659283 78659446 -10845107 + AluSc SINE Alu 119 295 -14 475 255 23 93 chr17 78660514 78660617 -10843936 - MIR SINE MIR -11 251 169 2016 150 3 13 chr17 78660617 78660930 -10843623 + AluSx SINE Alu 1 310 -2 475 255 23 93 chr17 78660930 78661042 -10843511 - MIR SINE MIR -93 169 51 1738 171 14 10 chr17 78661080 78661372 -10843181 + AluJo SINE Alu 1 293 -19 198 136 0 0 chr17 78661372 78661416 -10843137 + (GA)n Simple_repeat Simple_repeat 1 44 0 1301 121 0 11 chr17 78661573 78661755 -10842798 - AluSp SINE Alu 0 313 134 2046 121 50 0 chr17 78661755 78662035 -10842518 - AluSx SINE Alu -18 294 1 1634 245 23 64 chr17 78662041 78662694 -10841859 - L1MC5 LINE L1 -37 7924 7299 2386 73 0 23 chr17 78662714 78663015 -10841538 + AluY SINE Alu 5 298 -13 1185 165 0 0 chr17 78663015 78663191 -10841362 + AluSg/x SINE Alu 132 307 -3 621 246 23 62 chr17 78663196 78663452 -10841101 - L1MC5 LINE L1 -674 7287 7042 180 0 0 0 chr17 78663569 78663589 -10840964 + (A)n Simple_repeat Simple_repeat 1 20 0 249 196 0 0 chr17 78663747 78663798 -10840755 + (TG)n Simple_repeat Simple_repeat 2 52 0 318 245 57 88 chr17 78664305 78664369 -10840184 - MIR3 SINE MIR -39 169 105 1805 158 3 26 chr17 78664369 78664672 -10839881 + AluJo SINE Alu 1 296 -16 318 245 57 88 chr17 78664672 78664766 -10839787 - MIR3 SINE MIR -103 105 16 2216 128 3 0 chr17 78665188 78665485 -10839068 + AluSx SINE Alu 1 298 -14 970 239 133 106 chr17 78665796 78666103 -10838450 - MLT1G1 LTR MaLR -60 535 207 2136 98 0 60 chr17 78666103 78666418 -10838135 - AluSq SINE Alu -17 296 1 970 239 133 106 chr17 78666418 78666629 -10837924 - MLT1G1 LTR MaLR -388 207 3 552 225 113 35 chr17 78666631 78666862 -10837691 + Charlie8 DNA MER1_type 55 303 -2114 226 214 0 0 chr17 78668404 78668446 -10836107 + G-rich Low_complexity Low_complexity 1 42 0 1219 207 22 11 chr17 78668556 78668831 -10835722 - MLT1C LTR MaLR -3 464 187 1081 149 6 6 chr17 78668836 78669011 -10835542 - L1PA16 LINE L1 -1 6165 5991 2391 67 0 13 chr17 78669049 78669362 -10835191 - AluY SINE Alu -2 309 1 2087 113 0 3 chr17 78669370 78669663 -10834890 - AluSx SINE Alu -20 292 1 1949 150 13 0 chr17 78669662 78669968 -10834585 - AluSx SINE Alu -2 310 1 * 786 150 68 0 chr17 78669975 78670108 -10834445 - FLAM_C SINE Alu 0 143 2 2328 73 3 13 chr17 78670115 78670429 -10834124 - AluY SINE Alu 0 311 1 735 166 98 12 chr17 78670431 78670594 -10833959 - MLT1C LTR MaLR -285 182 6 1102 192 94 28 chr17 78670701 78670956 -10833597 + MER58B DNA MER1_type 34 305 -36 1349 101 0 0 chr17 78670958 78671136 -10833417 + AluSx SINE Alu 1 178 -134 279 0 0 0 chr17 78672141 78672172 -10832381 + (CCTG)n Simple_repeat Simple_repeat 3 33 0 1755 186 8 10 chr17 78672482 78672870 -10831683 - Charlie5 DNA MER1_type 0 2621 2235 403 244 87 0 chr17 78672876 78672991 -10831562 - MER3 DNA MER1_type -86 123 46 285 298 160 0 chr17 78673067 78673198 -10831355 + MIR SINE MIR 52 203 -59 246 203 230 0 chr17 78673209 78673283 -10831270 + MIR SINE MIR 110 200 -62 239 139 0 0 chr17 78673768 78673804 -10830749 - L2 LINE L2 -19 3294 3259 285 336 16 41 chr17 78673889 78674011 -10830542 + L2 LINE L2 3185 3303 -10 269 290 141 7 chr17 78674029 78674186 -10830367 - MIR SINE MIR -62 146 5 269 329 12 0 chr17 78675131 78675216 -10829337 - L2 LINE L2 0 3272 3187 2259 82 7 0 chr17 78675226 78675520 -10829033 + AluSx SINE Alu 1 296 -16 568 287 99 14 chr17 78675521 78675744 -10828809 - MLT1A2 LTR MaLR 0 390 149 684 206 65 12 chr17 78675881 78676051 -10828502 - MLT1A2 LTR MaLR -195 179 1 1712 232 27 12 chr17 78676083 78676484 -10828069 - MLT1C LTR MaLR -4 463 57 327 308 92 0 chr17 78677182 78677302 -10827251 + L3 LINE CR1 1232 1362 -215 2226 95 7 0 chr17 78677465 78677760 -10826793 + AluSp SINE Alu 5 301 -12 257 279 96 0 chr17 78677982 78678086 -10826467 - MIR3 SINE MIR -90 118 5 * 287 203 0 0 chr17 78678078 78678137 -10826416 + MIR SINE MIR 108 166 -96 940 111 8 0 chr17 78678301 78678427 -10826126 - FLAM_C SINE Alu -6 127 1 1798 150 22 7 chr17 78678505 78678858 -10825695 - MSTB LTR MaLR -1 425 7 248 0 0 30 chr17 78679207 78679240 -10825313 + (TCTG)n Simple_repeat Simple_repeat 1 32 0 587 288 44 10 chr17 78679435 78679640 -10824913 - MIR SINE MIR -37 225 14 374 319 112 5 chr17 78680746 78680934 -10823619 - MER113 DNA MER1_type? -307 214 7 2386 61 0 3 chr17 78681607 78681904 -10822649 - AluY SINE Alu -15 296 1 2018 111 14 0 chr17 78681908 78682196 -10822357 - AluSx SINE Alu -20 292 1 313 231 22 11 chr17 78682357 78682448 -10822105 + L2 LINE L2 3173 3264 -8 1217 199 5 0 chr17 78682629 78682850 -10821703 - AluJb SINE Alu -6 306 85 678 125 125 0 chr17 78682962 78683074 -10821479 - FLAM_C SINE Alu -16 127 2 2049 130 7 0 chr17 78684079 78684387 -10820166 + AluSx SINE Alu 1 310 -2 2403 70 0 0 chr17 78684971 78685272 -10819281 + AluY SINE Alu 1 301 -10 2363 89 0 0 chr17 78687380 78687684 -10816869 - AluSx SINE Alu -8 304 1 1969 137 0 13 chr17 78688040 78688346 -10816207 + AluJo SINE Alu 1 302 -10 2041 115 0 34 chr17 78688346 78688486 -10816067 + AluSx SINE Alu 1 144 -168 2230 71 7 0 chr17 78688486 78688804 -10815749 + AluSp SINE Alu 1 320 0 2041 115 0 34 chr17 78688804 78688985 -10815568 + AluSx SINE Alu 144 312 0 1619 201 35 58 chr17 78689007 78689441 -10815112 + MLT1C LTR MaLR 42 465 -2 1772 159 13 10 chr17 78689469 78689770 -10814783 + AluJb SINE Alu 1 302 -10 2224 92 10 0 chr17 78689792 78690095 -10814458 - AluSp SINE Alu -7 306 1 237 208 0 19 chr17 78690096 78690149 -10814404 - MIR SINE MIR -58 150 99 330 308 23 39 chr17 78690679 78690809 -10813744 + MIR SINE MIR 23 150 -112 2248 102 0 0 chr17 78690875 78691180 -10813373 - AluSx SINE Alu -5 307 3 305 312 55 9 chr17 78691699 78691808 -10812745 - MIR SINE MIR -63 145 32 242 300 77 41 chr17 78691790 78691960 -10812593 - MIR SINE MIR -8 254 79 * 1182 134 3 0 chr17 78692538 78693222 -10811331 + (CTCA)n Simple_repeat Simple_repeat 1 686 0 2092 182 27 27 chr17 78693306 78693745 -10810808 + MLT1D LTR MaLR 8 446 -59 1718 153 35 0 chr17 78693745 78694032 -10810521 + AluJo SINE Alu 1 297 -15 2098 99 0 3 chr17 78694036 78694352 -10810201 - AluSx SINE Alu 0 315 1 826 154 0 22 chr17 78694592 78694728 -10809825 + FLAM_C SINE Alu 1 133 0 1706 144 41 3 chr17 78695715 78696007 -10808546 + AluJb SINE Alu 1 303 -9 253 289 0 13 chr17 78697002 78697054 -10807499 + MER91B DNA MER1_type 9 61 -129 2069 103 0 20 chr17 78697054 78697356 -10807197 + AluSx SINE Alu 1 296 -16 253 289 0 13 chr17 78697356 78697379 -10807174 + MER91B DNA MER1_type 61 83 -107 * 452 324 33 0 chr17 78697370 78697552 -10807001 + MIR SINE MIR 39 226 -36 444 261 0 0 chr17 78697755 78697885 -10806668 + (CA)n Simple_repeat Simple_repeat 1 130 0 207 329 24 0 chr17 78698596 78698678 -10805875 + GA-rich Low_complexity Low_complexity 4 87 0 407 176 0 14 chr17 78700171 78700245 -10804308 + MER5B DNA MER1_type 102 174 -4 586 113 0 0 chr17 78700288 78700368 -10804185 - MADE1 DNA Mariner 0 80 1 1006 79 0 14 chr17 78700524 78700663 -10803890 + AluYb8 SINE Alu 1 137 -181 374 149 0 4 chr17 78700663 78700734 -10803819 - Alu SINE Alu -251 50 2 1966 195 35 12 chr17 78700735 78701297 -10803256 - L1MC/D LINE L1 -743 5403 4890 951 155 21 52 chr17 78701357 78701551 -10803002 - MER58A DNA MER1_type 0 224 37 346 281 104 18 chr17 78701568 78701732 -10802821 - L1MC5 LINE L1 -524 7437 7260 2432 59 3 0 chr17 78701779 78702083 -10802470 - AluY SINE Alu -6 305 1 416 302 112 14 chr17 78702217 78702512 -10802041 + L1ME4a LINE L1 5575 5898 -223 1901 93 0 77 chr17 78702521 78702852 -10801701 + AluSx SINE Alu 1 312 0 682 244 40 108 chr17 78702916 78703081 -10801472 - MIR SINE MIR 0 262 118 2065 113 3 0 chr17 78703081 78703373 -10801180 + AluSx SINE Alu 1 293 -19 682 244 40 108 chr17 78703373 78703457 -10801096 - MIR SINE MIR -144 118 30 2038 118 3 0 chr17 78703652 78703948 -10800605 - AluSx SINE Alu -15 297 1 414 326 71 10 chr17 78705538 78705734 -10798819 + MIR SINE MIR 23 230 -32 206 32 32 0 chr17 78705760 78705791 -10798762 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2047 120 3 0 chr17 78705828 78706146 -10798407 - AluSq SINE Alu 0 319 1 197 354 10 31 chr17 78706699 78706795 -10797758 + MIR SINE MIR 118 211 -51 1962 101 59 0 chr17 78707022 78707310 -10797243 + AluSx SINE Alu 2 306 -6 222 370 11 0 chr17 78707678 78707770 -10796783 - L2 LINE L2 -18 3295 3203 2048 112 3 0 chr17 78707921 78708206 -10796347 + AluSq SINE Alu 16 301 -12 2010 108 14 0 chr17 78708250 78708537 -10796016 + AluSq SINE Alu 1 291 -22 1521 166 13 45 chr17 78708985 78709293 -10795260 - AluJo SINE Alu -14 298 1 296 246 98 49 chr17 78709340 78709462 -10795091 - MIR SINE MIR -55 207 80 205 362 43 0 chr17 78709805 78709899 -10794654 + L3b LINE CR1 1286 1383 -200 606 229 17 0 chr17 78710221 78710339 -10794214 - AluSq/x SINE Alu -192 121 2 869 157 39 39 chr17 78710341 78710573 -10793980 - Tigger2 DNA MER2_type -56 2652 2421 2089 117 0 3 chr17 78710573 78710873 -10793680 + AluSg SINE Alu 1 299 -11 869 157 39 39 chr17 78710873 78710931 -10793622 - Tigger2 DNA MER2_type -287 2421 2 1900 105 14 21 chr17 78710961 78711246 -10793307 + AluSx SINE Alu 1 283 -29 692 221 22 0 chr17 78711257 78711393 -10793160 - MER3 DNA MER1_type -70 139 1 866 165 0 0 chr17 78711671 78711804 -10792749 + FLAM_C SINE Alu 1 133 0 1363 165 39 16 chr17 78711854 78712109 -10792444 + AluJo SINE Alu 42 302 -10 2179 96 10 10 chr17 78713112 78713425 -10791128 + AluSq SINE Alu 1 313 0 264 261 117 27 chr17 78713546 78713657 -10790896 + MIR SINE MIR 7 127 -135 428 284 39 0 chr17 78713727 78713854 -10790699 + MIR SINE MIR 119 250 -12 823 137 24 54 chr17 78713880 78713921 -10790632 - MLT1B LTR MaLR -15 375 334 3704 114 19 15 chr17 78713921 78714446 -10790107 - MER1A DNA MER1_type 0 527 1 823 137 24 54 chr17 78714446 78714572 -10789981 - MLT1B LTR MaLR -56 334 213 369 159 84 9 chr17 78714582 78714689 -10789864 - AluSc SINE Alu -64 235 121 425 53 27 40 chr17 78714836 78714911 -10789642 - MADE1 DNA Mariner -6 74 1 1667 161 7 7 chr17 78715812 78716120 -10788433 - AluJb SINE Alu 0 308 1 303 229 253 32 chr17 78716128 78716265 -10788288 - MIR SINE MIR -63 145 34 828 161 167 158 chr17 78716514 78716569 -10787984 + MER4C LTR ERV1 1 54 -411 1759 130 0 25 chr17 78716569 78716846 -10787707 + AluJo SINE Alu 26 295 -17 828 161 167 158 chr17 78716846 78717251 -10787302 + MER4C LTR ERV1 54 465 0 2146 110 0 10 chr17 78717364 78717664 -10786889 - AluSx SINE Alu -15 297 1 21 0 0 0 chr17 78718630 78718651 -10785902 + GC_rich Low_complexity Low_complexity 1 21 0 284 295 0 13 chr17 78720534 78720612 -10783941 + MIR SINE MIR 33 109 -153 191 294 0 0 chr17 78720620 78720671 -10783882 + L2 LINE L2 3210 3260 -12 1885 113 4 0 chr17 78720933 78721199 -10783354 - AluSx SINE Alu -45 267 1 802 210 204 5 chr17 78722492 78722776 -10781777 + MER58 DNA MER1_type 1 2420 0 376 295 53 78 chr17 78724762 78725006 -10779547 + MIR SINE MIR 19 256 -6 202 291 109 9 chr17 78725148 78725258 -10779295 - MIR SINE MIR -59 203 83 22 35 0 0 chr17 78725315 78725344 -10779209 + AT_rich Low_complexity Low_complexity 1 29 0 232 184 61 0 chr17 78726747 78726796 -10777757 - MER113 DNA MER1_type? -332 189 138 972 201 18 39 chr17 78727014 78727243 -10777310 - MER58A DNA MER1_type 0 224 1 1611 158 7 34 chr17 78727723 78728021 -10776532 - AluSg SINE Alu -19 291 2 2371 56 13 0 chr17 78729691 78729993 -10774560 - AluSq SINE Alu -7 306 1 1823 116 60 21 chr17 78730441 78730725 -10773828 + AluSg SINE Alu 1 295 -15 2214 96 3 0 chr17 78730821 78731114 -10773439 + AluSp SINE Alu 2 295 -18 216 0 0 0 chr17 78731172 78731196 -10773357 + (A)n Simple_repeat Simple_repeat 1 24 0 1981 110 10 0 chr17 78732336 78732626 -10771927 - AluSx SINE Alu -19 293 1 2251 71 0 3 chr17 78732816 78733112 -10771441 + AluY SINE Alu 1 295 -16 425 228 61 111 chr17 78734369 78734453 -10770100 + MIR SINE MIR 34 106 -156 2169 93 0 7 chr17 78734453 78734753 -10769800 + AluSx SINE Alu 1 298 -14 425 228 61 111 chr17 78734753 78734848 -10769705 + MIR SINE MIR 106 204 -58 2039 103 33 0 chr17 78735038 78735338 -10769215 + AluSp SINE Alu 1 310 -3 397 343 29 0 chr17 78735403 78735540 -10769013 + MIR3 SINE MIR 5 145 -63 1606 154 13 27 chr17 78736913 78737211 -10767342 - AluJb SINE Alu -18 294 1 198 0 0 0 chr17 78739117 78739139 -10765414 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1685 135 11 25 chr17 78739141 78739423 -10765130 - AluSx SINE Alu -30 282 5 263 229 0 29 chr17 78739558 78739628 -10764925 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2035 94 31 0 chr17 78739661 78739949 -10764604 - AluSc SINE Alu -12 297 1 272 323 21 0 chr17 78740152 78740245 -10764308 + L2 LINE L2 3200 3294 -19 2244 82 0 28 chr17 78740458 78740777 -10763776 - AluSx SINE Alu -2 310 1 227 39 0 0 chr17 78740777 78740803 -10763750 - AluY SINE Alu -266 36 11 258 316 116 49 chr17 78742670 78742895 -10761658 + L3b LINE CR1 1291 1530 -53 2029 89 21 10 chr17 78743659 78743950 -10760603 + AluSq SINE Alu 1 294 -19 327 49 0 0 chr17 78744023 78744064 -10760489 + (ATTG)n Simple_repeat Simple_repeat 4 44 0 1732 140 4 0 chr17 78744064 78744336 -10760217 - AluJb SINE Alu -34 278 6 2328 87 0 10 chr17 78744461 78744773 -10759780 - AluSx SINE Alu -3 309 1 1004 193 56 5 chr17 78746151 78746348 -10758205 + MER3 DNA MER1_type 3 209 0 2195 103 0 3 chr17 78748155 78748455 -10756098 + AluSg SINE Alu 1 299 -11 257 0 30 0 chr17 78748455 78748488 -10756065 + (TA)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr17 78748983 78749003 -10755550 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1116 89 0 0 chr17 78749324 78749504 -10755049 + (TCCTG)n Simple_repeat Simple_repeat 1 180 0 279 54 0 0 chr17 78749506 78749543 -10755010 + (CTGTG)n Simple_repeat Simple_repeat 4 40 0 25 83 0 0 chr17 78749750 78749810 -10754743 + AT_rich Low_complexity Low_complexity 1 60 0 1513 146 3 69 chr17 78749924 78750212 -10754341 - AluJb SINE Alu -43 269 1 400 173 0 39 chr17 78750240 78750344 -10754209 + C-rich Low_complexity Low_complexity 2 101 0 1241 174 17 4 chr17 78750360 78750601 -10753952 - AluJo SINE Alu -14 298 55 2145 122 3 0 chr17 78751009 78751320 -10753233 - AluSp SINE Alu -1 312 1 451 248 71 21 chr17 78751327 78751468 -10753085 - MIR SINE MIR -100 162 15 2286 100 3 0 chr17 78751549 78751860 -10752693 - AluSx SINE Alu 0 312 1 199 250 222 0 chr17 78751960 78752032 -10752521 + MER5C DNA MER1_type 122 209 -115 1479 164 30 49 chr17 78752142 78752298 -10752255 - AluJo SINE Alu -14 298 149 2339 56 3 13 chr17 78752298 78752602 -10751951 - AluSc SINE Alu -8 301 1 1479 164 30 49 chr17 78752602 78752749 -10751804 - AluJo SINE Alu -163 149 1 2447 63 0 0 chr17 78753158 78753460 -10751093 + AluSg SINE Alu 1 302 -8 1946 132 0 0 chr17 78753627 78753915 -10750638 + AluSx SINE Alu 18 305 -7 2029 134 0 10 chr17 78754415 78754728 -10749825 - AluJb SINE Alu -2 310 1 2276 84 3 3 chr17 78754742 78755050 -10749503 - AluY SINE Alu -3 308 1 2093 83 0 20 chr17 78755205 78755377 -10749176 - AluSp SINE Alu -9 304 139 2354 66 0 3 chr17 78755377 78755680 -10748873 - AluY SINE Alu -9 302 1 2093 83 0 20 chr17 78755680 78755807 -10748746 - AluSp SINE Alu -174 139 11 1973 98 3 60 chr17 78756437 78756753 -10747800 - AluSx SINE Alu -14 298 1 2236 96 3 0 chr17 78756753 78757054 -10747499 - AluSc SINE Alu -7 302 1 1807 145 35 0 chr17 78757054 78757222 -10747331 - AluSx SINE Alu -12 300 116 186 118 0 0 chr17 78757222 78757256 -10747297 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1807 145 35 0 chr17 78757256 78757377 -10747176 - AluSx SINE Alu -196 116 1 232 279 16 0 chr17 78758072 78758133 -10746420 - L2 LINE L2 -5 3267 3206 184 284 60 15 chr17 78758687 78758754 -10745799 + L2 LINE L2 3232 3301 -12 1818 146 38 0 chr17 78758851 78759139 -10745414 + AluJb SINE Alu 1 299 -13 372 219 233 28 chr17 78759957 78760172 -10744381 + MER112 DNA MER1_type 1 259 -1 2148 110 0 0 chr17 78760438 78760737 -10743816 - AluSx SINE Alu -13 299 1 23 0 0 0 chr17 78760814 78760837 -10743716 + AT_rich Low_complexity Low_complexity 1 23 0 362 211 59 91 chr17 78760850 78761166 -10743387 - L1ME4a LINE L1 -120 6001 5694 2285 82 7 0 chr17 78761167 78761461 -10743092 - AluSc SINE Alu -13 296 1 30 0 0 0 chr17 78761504 78761534 -10743019 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr17 78761973 78761997 -10742556 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr17 78762249 78762287 -10742266 + AT_rich Low_complexity Low_complexity 1 38 0 1311 142 6 151 chr17 78762383 78762543 -10742010 - AluSx SINE Alu -18 294 112 2221 99 0 0 chr17 78762543 78762845 -10741708 - AluSc SINE Alu -7 302 1 1594 85 9 5 chr17 78762845 78763069 -10741484 - AluSq SINE Alu -18 295 71 1311 142 6 151 chr17 78763069 78763251 -10741302 - AluSx SINE Alu -198 114 1 1533 156 17 53 chr17 78763517 78763819 -10740734 + AluJo SINE Alu 1 291 -21 22 0 0 0 chr17 78763911 78763933 -10740620 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr17 78764680 78764705 -10739848 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2056 63 15 11 chr17 78767310 78767579 -10736974 - AluY SINE Alu -8 303 34 1466 111 5 0 chr17 78769234 78769460 -10735093 - AluSg/x SINE Alu 0 308 82 2087 108 13 0 chr17 78769606 78769911 -10734642 - AluSq SINE Alu -4 309 1 282 325 126 0 chr17 78770009 78770160 -10734393 - MIR SINE MIR -71 191 22 264 277 50 20 chr17 78770490 78770591 -10733962 + MIR SINE MIR 89 192 -70 21 0 0 0 chr17 78771148 78771169 -10733384 + AT_rich Low_complexity Low_complexity 1 21 0 277 93 23 0 chr17 78771928 78771971 -10732582 + MIR SINE MIR 109 152 -56 2246 105 0 3 chr17 78771971 78772284 -10732269 + AluSx SINE Alu 1 312 0 871 234 0 0 chr17 78772287 78772458 -10732095 + AluJb SINE Alu 122 292 -20 1028 177 23 6 chr17 78772460 78772635 -10731918 + MER45A DNA AcHobo 1 178 0 266 303 10 30 chr17 78772639 78772738 -10731815 + MIR SINE MIR 154 250 -12 1916 142 20 0 chr17 78774121 78774416 -10730137 + AluSx SINE Alu 1 301 -11 457 301 13 6 chr17 78774796 78774952 -10729601 + MIR3 SINE MIR 49 205 -3 802 254 41 5 chr17 78775062 78775259 -10729294 - MIR SINE MIR -39 223 20 433 264 0 50 chr17 78776164 78776285 -10728268 - MER5B DNA MER1_type -9 169 55 199 294 0 15 chr17 78776288 78776356 -10728197 + MER5B DNA MER1_type 13 79 -99 * 273 195 73 12 chr17 78776295 78776377 -10728176 - MER5A DNA MER1_type -19 170 84 633 244 112 5 chr17 78777229 78777426 -10727127 - MIR SINE MIR -14 248 31 340 283 15 96 chr17 78777530 78777728 -10726825 - MIR SINE MIR -79 183 2 1286 149 169 0 chr17 78778891 78779152 -10725401 + AluJb SINE Alu 1 305 -7 204 273 0 0 chr17 78779155 78779210 -10725343 + L3b LINE CR1 1333 1387 -196 2146 117 7 0 chr17 78781794 78782101 -10722452 - AluSx SINE Alu -3 309 1 1593 258 107 39 chr17 78782313 78782495 -10722058 - MER115 DNA AcHobo -3 690 522 2133 99 10 0 chr17 78782495 78782789 -10721764 + AluSx SINE Alu 1 297 -15 1593 258 107 39 chr17 78782789 78783169 -10721384 - MER115 DNA AcHobo -171 522 90 347 168 65 56 chr17 78784265 78784372 -10720181 + MIR3 SINE MIR 81 188 -20 290 263 161 25 chr17 78784412 78784530 -10720023 + MIR3 SINE MIR 3 136 -72 2136 99 3 0 chr17 78785215 78785498 -10719055 + AluSx SINE Alu 1 284 -28 876 165 9 85 chr17 78785723 78785780 -10718773 + AluJo SINE Alu 86 146 -166 2104 125 7 0 chr17 78785780 78786084 -10718469 + AluSx SINE Alu 1 306 -6 876 165 9 85 chr17 78786084 78786238 -10718315 + AluJo SINE Alu 146 281 -31 358 172 0 23 chr17 78786288 78786375 -10718178 + GA-rich Low_complexity Low_complexity 1 85 0 305 283 68 52 chr17 78786810 78786830 -10717723 - LTR16C LTR ERVL -76 415 397 912 189 68 5 chr17 78786830 78787036 -10717517 + MER20 DNA MER1_type 1 219 0 305 283 68 52 chr17 78787036 78787266 -10717287 - LTR16C LTR ERVL -94 397 161 2142 103 3 28 chr17 78788262 78788582 -10715971 + AluSx SINE Alu 1 312 0 341 283 39 19 chr17 78789883 78790037 -10714516 - MIR SINE MIR -62 146 36 1288 140 19 23 chr17 78790667 78790900 -10713653 - AluSg/x SINE Alu 0 312 83 343 235 0 67 chr17 78791219 78791338 -10713215 + MIR SINE MIR 80 190 -72 512 192 96 24 chr17 78791791 78791916 -10712637 - L2 LINE L2 0 3313 3180 1823 137 41 10 chr17 78792467 78792639 -10711914 - AluSx SINE Alu -10 302 116 318 50 0 0 chr17 78792639 78792679 -10711874 + (TTG)n Simple_repeat Simple_repeat 2 41 0 1823 137 41 10 chr17 78792679 78792799 -10711754 - AluSx SINE Alu -196 116 1 2204 97 0 10 chr17 78793278 78793586 -10710967 - AluSq SINE Alu -8 305 1 1012 148 69 28 chr17 78793588 78793804 -10710749 + MER2 DNA MER2_type 120 344 -1 2052 125 0 20 chr17 78793808 78794113 -10710440 - AluSx SINE Alu -13 299 1 825 284 108 38 chr17 78794184 78794937 -10709616 + L1MC5 LINE L1 6063 6899 -921 703 156 9 0 chr17 78795190 78795299 -10709254 - FLAM_C SINE Alu -32 111 2 255 179 0 0 chr17 78795440 78795479 -10709074 - Alu SINE Alu -263 39 1 1831 149 17 7 chr17 78795503 78795805 -10708748 + AluJb SINE Alu 1 305 -7 246 305 31 0 chr17 78796059 78796139 -10708414 - MIR SINE MIR -96 112 42 814 182 0 19 chr17 78796166 78796320 -10708233 - FRAM SINE Alu 0 40 1 1831 158 7 0 chr17 78797562 78797854 -10706699 - AluJb SINE Alu -18 294 1 2374 55 0 7 chr17 78798013 78798304 -10706249 - AluY SINE Alu -22 289 1 1301 171 4 13 chr17 78800556 78800790 -10703763 + AluJb SINE Alu 74 305 -7 801 312 162 48 chr17 78801430 78801752 -10702801 + L2 LINE L2 1970 2254 -1059 1546 174 59 0 chr17 78801752 78802039 -10702514 - AluJb SINE Alu -8 304 1 801 312 162 48 chr17 78802039 78802931 -10701622 + L2 LINE L2 2254 3308 -5 544 129 12 0 chr17 78804099 78804184 -10700369 - MSTA LTR MaLR -342 86 1 764 192 45 40 chr17 78804218 78804395 -10700158 + MSTD LTR MaLR 217 394 -2 1559 95 5 0 chr17 78804518 78804728 -10699825 - AluSx SINE Alu -101 211 1 1770 154 31 3 chr17 78804728 78805020 -10699533 - AluJb SINE Alu -12 300 1 199 256 0 0 chr17 78805069 78805112 -10699441 + L2 LINE L2 3179 3221 -92 23 78 0 0 chr17 78805980 78806031 -10698522 + GC_rich Low_complexity Low_complexity 1 51 0 383 73 0 103 chr17 78806406 78806542 -10698011 + (CGGGGG)n Simple_repeat Simple_repeat 2 123 0 277 242 10 57 chr17 78807332 78807458 -10697095 - MIR SINE MIR -49 213 98 272 353 16 27 chr17 78807458 78807645 -10696908 - MIR SINE MIR -26 236 52 549 325 82 84 chr17 78807773 78807952 -10696601 + LTR67 LTR ERVL 21 199 -358 1586 101 0 111 chr17 78807952 78808079 -10696474 + AluJb SINE Alu 23 162 -150 2218 64 0 64 chr17 78808079 78808393 -10696160 + AluSx SINE Alu 11 304 -8 1586 101 0 111 chr17 78808393 78808581 -10695972 + AluJb SINE Alu 162 303 -9 549 325 82 84 chr17 78808581 78808939 -10695614 + LTR67 LTR ERVL 199 557 0 342 0 0 0 chr17 78809125 78809163 -10695390 + (TG)n Simple_repeat Simple_repeat 2 39 0 240 59 0 0 chr17 78809211 78809245 -10695308 + (TG)n Simple_repeat Simple_repeat 2 35 0 1710 143 7 7 chr17 78809245 78809525 -10695028 - AluJb SINE Alu -27 285 6 2097 122 0 3 chr17 78810385 78810689 -10693864 - AluSx SINE Alu -9 303 1 234 0 0 0 chr17 78810738 78810764 -10693789 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1598 158 0 4 chr17 78810765 78811012 -10693541 - AluJb SINE Alu -55 257 12 206 290 0 40 chr17 78811601 78811701 -10692852 + GA-rich Low_complexity Low_complexity 5 100 0 567 278 101 56 chr17 78811992 78812078 -10692475 + L2 LINE L2 2218 2299 -1015 1945 122 3 20 chr17 78812078 78812381 -10692172 + AluSx SINE Alu 1 298 -14 567 278 101 56 chr17 78812381 78812600 -10691953 + L2 LINE L2 2299 2537 -777 302 203 85 0 chr17 78812608 78812667 -10691886 - MER58A DNA MER1_type -12 212 149 905 101 0 0 chr17 78812694 78812813 -10691740 - AluSq/x SINE Alu -193 119 1 592 271 6 18 chr17 78812815 78812919 -10691634 - MER58A DNA MER1_type -177 164 61 1244 233 0 4 chr17 78812919 78813159 -10691394 + MER8 DNA MER2_type 1 239 0 592 271 6 18 chr17 78813159 78813220 -10691333 - MER58A DNA MER1_type -280 61 1 2376 89 0 0 chr17 78813264 78813568 -10690985 - AluSx SINE Alu -8 304 1 522 286 184 49 chr17 78813587 78813598 -10690955 + L2 LINE L2 2636 2644 -669 1794 170 0 16 chr17 78813598 78813778 -10690775 - AluJb SINE Alu 0 312 138 1906 157 3 0 chr17 78813778 78814078 -10690475 - AluSx SINE Alu -11 301 1 1794 170 0 16 chr17 78814078 78814214 -10690339 - AluJb SINE Alu -174 138 1 522 286 184 49 chr17 78814214 78814582 -10689971 + L2 LINE L2 2644 2961 -352 514 320 63 32 chr17 78814582 78814674 -10689879 - MIR SINE MIR 0 262 174 1756 167 28 0 chr17 78814674 78814956 -10689597 - AluJo SINE Alu -16 296 7 514 320 63 32 chr17 78814956 78815116 -10689437 - MIR SINE MIR -88 174 2 1580 128 40 90 chr17 78815124 78815445 -10689108 - AluSq SINE Alu -8 305 1 522 286 184 49 chr17 78815445 78815551 -10689002 + L2 LINE L2 2967 3057 -256 675 171 18 0 chr17 78815551 78815719 -10688834 - FLAM_A SINE Alu 0 172 3 522 286 184 49 chr17 78815719 78815815 -10688738 + L2 LINE L2 3057 3312 -1 381 271 15 15 chr17 78816104 78816237 -10688316 + LTR33 LTR ERVL 380 512 -9 306 372 33 6 chr17 78816750 78816930 -10687623 - MIR SINE MIR -8 254 70 2505 71 0 10 chr17 78816968 78817279 -10687274 + AluY SINE Alu 1 308 -3 681 267 0 0 chr17 78817291 78817452 -10687101 + MIR SINE MIR 92 252 -10 2319 100 3 7 chr17 78817743 78818043 -10686510 + AluSx SINE Alu 1 299 -13 333 0 0 0 chr17 78818655 78818692 -10685861 + (TAA)n Simple_repeat Simple_repeat 3 39 0 2193 123 20 0 chr17 78818692 78818992 -10685561 + AluSx SINE Alu 7 312 0 1830 132 4 0 chr17 78819865 78820122 -10684431 + AluSx SINE Alu 44 301 -11 1622 198 0 10 chr17 78820141 78820429 -10684124 - AluJb SINE Alu -2 310 26 2240 98 0 14 chr17 78821870 78822165 -10682388 + AluSq SINE Alu 1 291 -22 2824 67 8 5 chr17 78822677 78823051 -10681502 - THE1C LTR MaLR 0 375 1 2309 117 0 0 chr17 78823765 78824065 -10680488 + AluSx SINE Alu 1 300 -12 836 165 0 0 chr17 78824783 78824916 -10679637 - FLAM_C SINE Alu 0 133 1 2565 90 0 0 chr17 78825202 78825513 -10679040 - AluSx SINE Alu -1 311 1 2401 90 3 3 chr17 78826139 78826438 -10678115 - AluSq SINE Alu -14 299 1 2523 96 0 0 chr17 78827408 78827721 -10676832 - AluSq SINE Alu 0 313 1 325 151 82 41 chr17 78828234 78828307 -10676246 - MER69 DNA AcHobo 0 2526 2451 * 742 186 21 7 chr17 78828305 78828450 -10676103 - MER69 DNA AcHobo -1079 147 1 192 363 22 11 chr17 78830779 78830870 -10673683 + MIR SINE MIR 165 256 -6 494 244 55 28 chr17 78831244 78831427 -10673126 - MIR SINE MIR -61 147 4 369 0 0 0 chr17 78834133 78834174 -10670379 + (CA)n Simple_repeat Simple_repeat 1 41 0 306 0 0 0 chr17 78835312 78835346 -10669207 + (CA)n Simple_repeat Simple_repeat 2 35 0 2355 113 0 0 chr17 78836685 78837035 -10667518 - AluY SINE Alu 0 350 1 2505 87 0 0 chr17 78837037 78837346 -10667207 - AluSq SINE Alu -4 309 1 1926 121 3 62 chr17 78837349 78837655 -10666898 - AluSx SINE Alu -16 296 9 1996 156 0 26 chr17 78838878 78839186 -10665367 + AluJb SINE Alu 1 300 -12 505 292 10 46 chr17 78839500 78839695 -10664858 - MIR3 SINE MIR -4 204 17 2136 143 0 3 chr17 78839956 78840263 -10664290 + AluSx SINE Alu 1 306 -6 361 0 41 0 chr17 78840417 78840466 -10664087 + (GA)n Simple_repeat Simple_repeat 2 52 0 1792 130 61 0 chr17 78840467 78840728 -10663825 - AluJb SINE Alu -35 277 1 347 169 70 0 chr17 78840849 78840920 -10663633 - MER103 DNA DNA -87 79 4 814 194 58 31 chr17 78840953 78841144 -10663409 - MIR SINE MIR 0 262 67 1708 152 6 68 chr17 78841279 78841602 -10662951 - AluJo SINE Alu -9 303 1 535 239 58 19 chr17 78841958 78842113 -10662440 - MER5B DNA MER1_type -17 161 1 186 43 0 0 chr17 78843891 78843914 -10660639 + (CCCCCG)n Simple_repeat Simple_repeat 1 23 0 2359 92 0 7 chr17 78844362 78844656 -10659897 - AluSq SINE Alu -21 292 1 385 283 24 101 chr17 78844732 78844979 -10659574 + MARNA DNA Mariner 316 543 -43 2212 114 3 13 chr17 78845152 78845460 -10659093 - AluSx SINE Alu -7 305 1 2296 116 0 0 chr17 78845772 78846073 -10658480 - AluSx SINE Alu -11 301 1 564 206 48 0 chr17 78847778 78847904 -10656649 - MER94 DNA DNA -2 132 1 2510 88 0 0 chr17 78849006 78849314 -10655239 + AluSx SINE Alu 1 308 -4 1820 162 7 10 chr17 78849324 78849621 -10654932 + AluJb SINE Alu 1 296 -16 1274 53 13 0 chr17 78849814 78849965 -10654588 + AluSp SINE Alu 1 153 -160 5060 148 77 15 chr17 78850113 78850269 -10654284 + L1MA9 LINE L1 5190 5335 -977 2035 110 71 0 chr17 78850269 78850550 -10654003 + AluSx SINE Alu 1 301 -11 5060 148 77 15 chr17 78850550 78851420 -10653133 + L1MA9 LINE L1 5335 6278 -34 1273 117 0 11 chr17 78851433 78851613 -10652940 - AluSg/x SINE Alu 0 312 135 230 128 21 0 chr17 78851613 78851660 -10652893 + L1MA9 LINE L1 6265 6312 0 349 304 24 8 chr17 78851750 78851875 -10652678 - L2 LINE L2 0 3313 3187 1151 262 174 34 chr17 78852077 78852234 -10652319 + L2 LINE L2 1552 1686 -1628 2305 96 10 0 chr17 78852234 78852527 -10652026 - AluSx SINE Alu -16 296 1 1151 262 174 34 chr17 78852527 78852994 -10651559 + L2 LINE L2 1686 2264 -1050 1899 166 3 3 chr17 78853114 78853421 -10651132 - AluSx SINE Alu -5 307 1 864 195 59 6 chr17 78853456 78853651 -10650902 + AluJb SINE Alu 104 307 0 2131 133 3 0 chr17 78853660 78853962 -10650591 + AluJo SINE Alu 1 303 -9 2079 90 52 0 chr17 78854259 78854548 -10650005 + AluY SINE Alu 1 304 -7 201 333 86 0 chr17 78854652 78854769 -10649784 - MIR SINE MIR -80 182 56 220 304 20 10 chr17 78854832 78854934 -10649619 - MER5A DNA MER1_type -76 113 11 180 283 133 33 chr17 78854994 78855114 -10649439 - L2 LINE L2 -1 3271 3140 2348 103 0 7 chr17 78855171 78855473 -10649080 - AluSx SINE Alu -12 300 1 403 275 176 37 chr17 78856142 78856396 -10648157 - L2 LINE L2 -1 3312 3095 2329 106 0 13 chr17 78856396 78856699 -10647854 + AluSx SINE Alu 1 299 -13 403 275 176 37 chr17 78856699 78856901 -10647652 - L2 LINE L2 -218 3095 2922 2113 114 0 27 chr17 78856901 78857200 -10647353 + AluSx SINE Alu 11 301 -11 403 275 176 37 chr17 78857200 78857343 -10647210 - L2 LINE L2 -391 2922 2622 280 287 53 31 chr17 78857428 78857579 -10646974 - MIR SINE MIR -56 152 40 415 254 16 41 chr17 78859046 78859168 -10645385 - MIR SINE MIR -57 151 33 2271 91 0 3 chr17 78859277 78859564 -10644989 + AluSx SINE Alu 1 286 -26 1531 93 45 93 chr17 78859698 78859877 -10644676 - AluSg SINE Alu -12 298 112 2451 84 0 0 chr17 78859877 78860176 -10644377 - AluSq SINE Alu -14 299 1 2507 62 3 0 chr17 78860183 78860487 -10644066 - AluY SINE Alu -6 305 1 1531 93 45 93 chr17 78860487 78860568 -10643985 - AluSg SINE Alu -204 106 43 1904 111 21 99 chr17 78860751 78861084 -10643469 - AluYb8 SINE Alu -11 307 1 246 320 82 0 chr17 78861084 78861181 -10643372 - L1MC/D LINE L1 -2072 5736 5632 2305 115 0 7 chr17 78861262 78861567 -10642986 - AluSq SINE Alu -10 303 1 251 302 101 7 chr17 78861860 78861999 -10642554 + MIR3 SINE MIR 34 185 -23 2284 114 3 10 chr17 78862076 78862384 -10642169 + AluSq SINE Alu 1 306 -7 191 36 36 0 chr17 78862425 78862453 -10642100 + (TG)n Simple_repeat Simple_repeat 2 30 0 192 179 0 0 chr17 78862509 78862548 -10642005 + (TA)n Simple_repeat Simple_repeat 2 40 0 2297 95 0 3 chr17 78862802 78863119 -10641434 - AluSx SINE Alu 0 316 1 303 315 96 19 chr17 78863723 78864037 -10640516 + L2 LINE L2 2451 2788 -526 889 144 0 0 chr17 78864040 78864172 -10640381 + AluJo/FLAM SINE Alu 1 132 -180 1166 119 25 0 chr17 78864174 78864334 -10640219 + AluSq SINE Alu 1 164 -149 406 333 111 41 chr17 78864397 78864811 -10639742 + L2 LINE L2 2871 3313 0 1024 179 20 15 chr17 78866555 78866751 -10637802 + MER20 DNA MER1_type 4 200 -19 416 280 149 17 chr17 78866903 78867078 -10637475 + MIR3 SINE MIR 7 204 -4 625 156 27 27 chr17 78867244 78867471 -10637082 + CT-rich Low_complexity Low_complexity 1 227 0 353 191 16 0 chr17 78867531 78867594 -10636959 + MER58B DNA MER1_type 1 181 -160 299 289 132 31 chr17 78867611 78867770 -10636783 - MER21B LTR ERV1 -364 499 325 * 356 164 15 0 chr17 78867766 78867833 -10636720 + MER58B DNA MER1_type 169 236 -105 873 121 8 0 chr17 78867839 78867971 -10636582 - AluJb SINE Alu -179 133 1 459 270 17 0 chr17 78867972 78868087 -10636466 + MER58B DNA MER1_type 225 341 0 1679 107 13 90 chr17 78868620 78868930 -10635623 + AluSx SINE Alu 1 286 -26 192 229 0 42 chr17 78869053 78869101 -10635452 - L2 LINE L2 -225 3047 3002 22 0 0 0 chr17 78872816 78872838 -10631715 + AT_rich Low_complexity Low_complexity 1 22 0 488 210 60 24 chr17 78872965 78873132 -10631421 + MER53 DNA DNA 1 173 -16 204 245 0 0 chr17 78873779 78873828 -10630725 + MIR SINE MIR 99 147 -115 2240 111 0 0 chr17 78873917 78874224 -10630329 - AluSx SINE Alu 0 312 6 784 143 16 8 chr17 78875409 78875535 -10629018 + AluJo/FLAM SINE Alu 1 127 -185 2131 102 0 3 chr17 78875536 78875829 -10628724 - AluSg SINE Alu -18 292 1 22 0 0 0 chr17 78875829 78875851 -10628702 + AT_rich Low_complexity Low_complexity 1 22 0 257 260 0 39 chr17 78875852 78875929 -10628624 + MIR SINE MIR 77 150 -58 2284 85 6 22 chr17 78875985 78876302 -10628251 - AluSx SINE Alu 0 312 1 688 172 30 30 chr17 78876324 78876458 -10628095 - AluJo SINE Alu -178 134 1 425 269 141 32 chr17 78876890 78877046 -10627507 - MIR SINE MIR -29 233 61 2123 110 0 0 chr17 78877566 78877884 -10626669 - AluSx SINE Alu 0 318 1 213 270 48 0 chr17 78877884 78877947 -10626606 - MIR SINE MIR -59 149 84 213 39 0 0 chr17 78877947 78877973 -10626580 + (CAGAG)n Simple_repeat Simple_repeat 3 28 0 608 110 0 0 chr17 78878927 78879009 -10625544 + AluS SINE Alu 1 82 -231 1934 99 51 0 chr17 78880322 78880595 -10623958 + AluSq SINE Alu 1 287 -26 1697 169 53 3 chr17 78880999 78881283 -10623270 + AluJb SINE Alu 1 298 -14 187 292 77 15 chr17 78882076 78882141 -10622412 - L2 LINE L2 -39 3233 3165 195 402 0 0 chr17 78882443 78882530 -10622023 - MER5A DNA MER1_type -40 149 63 1988 122 31 0 chr17 78882735 78883021 -10621532 - AluSx SINE Alu -13 299 5 1785 166 14 0 chr17 78883746 78884042 -10620511 + AluJo SINE Alu 1 300 -12 334 278 70 9 chr17 78885118 78885233 -10619320 - MIR SINE MIR -69 139 18 391 296 68 20 chr17 78887498 78887718 -10616835 + MIR SINE MIR 12 240 -22 221 344 123 8 chr17 78887887 78888009 -10616544 - L2 LINE L2 0 3272 3137 1121 93 16 50 chr17 78888027 78888038 -10616515 + AluSg/x SINE Alu 127 137 -175 1811 110 37 37 chr17 78888038 78888337 -10616216 + AluSg SINE Alu 1 299 -11 1121 93 16 50 chr17 78888337 78888507 -10616046 + AluSg/x SINE Alu 137 302 -10 912 192 0 0 chr17 78889473 78889629 -10614924 + AluJb SINE Alu 134 289 -23 2119 113 13 3 chr17 78889681 78889981 -10614572 + AluSx SINE Alu 1 303 -9 2027 92 78 0 chr17 78889983 78890265 -10614288 + AluSp SINE Alu 1 304 -9 266 309 10 0 chr17 78890318 78890415 -10614138 + L1MB5 LINE L1 5757 5854 -267 2139 119 3 0 chr17 78890579 78890872 -10613681 - AluSx SINE Alu -18 294 1 336 98 0 0 chr17 78892037 78892088 -10612465 + U5 snRNA snRNA 1 51 -65 2326 101 0 0 chr17 78892272 78892578 -10611975 + AluSq SINE Alu 1 306 -7 649 230 6 12 chr17 78892579 78892744 -10611809 - MER117 DNA MER1_type -17 180 17 571 343 29 24 chr17 78895551 78895806 -10608747 + MIR SINE MIR 4 261 -1 1743 134 51 0 chr17 78896320 78896595 -10607958 - AluSx SINE Alu -17 295 7 180 257 143 19 chr17 78897115 78897220 -10607333 - L2 LINE L2 -283 2989 2872 2218 115 3 6 chr17 78897442 78897755 -10606798 - AluSq SINE Alu -1 312 1 222 329 27 48 chr17 78897795 78897941 -10606612 - MIR SINE MIR -1 261 119 246 337 11 33 chr17 78898106 78898198 -10606355 - L2 LINE L2 0 3272 3183 2402 97 0 0 chr17 78898332 78898643 -10605910 - AluSq SINE Alu -2 311 1 258 319 53 35 chr17 78898692 78898805 -10605748 - L2 LINE L2 -194 3078 2964 514 289 82 16 chr17 78899037 78899231 -10605322 - MIR SINE MIR -27 235 29 271 261 123 23 chr17 78900806 78900936 -10603617 - MIR SINE MIR -56 206 64 279 348 68 52 chr17 78901640 78901890 -10602663 + MIR SINE MIR 8 261 -1 21 57 0 0 chr17 78902454 78902489 -10602064 + AT_rich Low_complexity Low_complexity 1 35 0 783 143 15 15 chr17 78902497 78902630 -10601923 + FLAM_C SINE Alu 1 133 0 2350 94 0 0 chr17 78902635 78902943 -10601610 + AluSp SINE Alu 1 308 -5 1652 186 9 47 chr17 78903159 78903498 -10601055 + L1MB5 LINE L1 5847 6172 -2 2152 113 7 3 chr17 78903506 78903816 -10600737 + AluSq SINE Alu 1 311 -2 1353 196 13 66 chr17 78903831 78904148 -10600405 + AluJo SINE Alu 12 311 -1 1869 132 36 10 chr17 78904156 78904459 -10600094 + AluSx SINE Alu 2 312 0 198 0 0 0 chr17 78906101 78906123 -10598430 + (CA)n Simple_repeat Simple_repeat 1 22 0 327 49 0 0 chr17 78906544 78906585 -10597968 + (CA)n Simple_repeat Simple_repeat 2 42 0 189 195 0 0 chr17 78907408 78907449 -10597104 + T-rich Low_complexity Low_complexity 1 41 0 479 275 236 11 chr17 78909501 78909707 -10594846 - MIR SINE MIR 0 262 18 2347 74 3 3 chr17 78909974 78910272 -10594281 - AluSp SINE Alu -15 298 1 1934 143 3 32 chr17 78910272 78910586 -10593967 - AluJb SINE Alu -5 307 3 21 36 0 0 chr17 78910728 78910756 -10593797 + AT_rich Low_complexity Low_complexity 1 28 0 1914 143 3 16 chr17 78910756 78910933 -10593620 - AluSx SINE Alu -2 310 137 2749 7 3 0 chr17 78910933 78911241 -10593312 - AluYa5 SINE Alu -2 309 1 1914 143 3 16 chr17 78911241 78911377 -10593176 - AluSx SINE Alu -175 137 1 198 0 0 0 chr17 78911390 78911412 -10593141 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1825 128 37 7 chr17 78911912 78912208 -10592345 + AluSq SINE Alu 1 305 -8 333 208 0 0 chr17 78912208 78912285 -10592268 + G-rich Low_complexity Low_complexity 1 77 0 1872 147 6 34 chr17 78912557 78912877 -10591676 - AluJb SINE Alu -1 311 1 531 0 0 0 chr17 78913019 78913078 -10591475 + (CA)n Simple_repeat Simple_repeat 2 60 0 1199 141 0 16 chr17 78913137 78913321 -10591232 + AluSx SINE Alu 1 181 -131 607 141 117 39 chr17 78913657 78913785 -10590768 - FLAM_C SINE Alu 0 143 6 1564 138 31 35 chr17 78913801 78914062 -10590491 - AluJo SINE Alu -14 298 39 1787 128 78 0 chr17 78914410 78914692 -10589861 + AluSp SINE Alu 1 304 -9 247 269 151 21 chr17 78914703 78914796 -10589757 - MIR SINE MIR -149 113 9 1049 161 0 0 chr17 78914914 78915075 -10589478 + FRAM SINE Alu 1 158 -18 2453 28 7 0 chr17 78915081 78915371 -10589182 + AluY SINE Alu 1 292 -19 626 86 0 0 chr17 79115388 79115469 -10389084 + AluSg/x SINE Alu 217 297 -13 645 158 79 63 chr17 79115508 79115698 -10388855 + L1M4 LINE L1 5111 5303 -843 1459 213 71 34 chr17 79115699 79116051 -10388502 - MLT1A2 LTR MaLR -9 365 1 1890 284 29 8 chr17 79116051 79116529 -10388024 - MLT1A2-int LTR MaLR 0 1735 1248 228 177 32 48 chr17 79116626 79116688 -10387865 - MLT1A2-int LTR MaLR -978 757 697 1490 242 42 20 chr17 79116716 79117247 -10387306 - MLT1-int LTR MaLR -477 894 232 28 56 0 28 chr17 79117598 79117631 -10386922 + AT_rich Low_complexity Low_complexity 1 33 -36 947 84 24 90 chr17 79117631 79117708 -10386845 + L1MA3 LINE L1 6146 6208 -97 1938 154 0 10 chr17 79117708 79118014 -10386539 - AluJb SINE Alu -9 303 1 947 84 24 90 chr17 79118014 79118102 -10386451 + L1MA3 LINE L1 6208 6300 -5 28 56 0 28 chr17 79118102 79118139 -10386414 + AT_rich Low_complexity Low_complexity 33 69 0 201 336 168 0 chr17 79118441 79118554 -10385999 + MIR3 SINE MIR 11 142 -66 1902 127 0 0 chr17 79118688 79119023 -10385530 - AluSx SINE Alu 0 335 1 2152 115 0 0 chr17 79119091 79119387 -10385166 - AluSx SINE Alu -16 296 1 228 302 81 0 chr17 79119778 79119864 -10384689 + L1ME3 LINE L1 1129 1221 -5202 260 119 69 31 chr17 79119896 79120056 -10384497 + (TA)n Simple_repeat Simple_repeat 1 166 0 21 71 0 0 chr17 79120060 79120102 -10384451 + AT_rich Low_complexity Low_complexity 1 42 0 311 89 18 0 chr17 79120149 79120205 -10384348 + (TTATA)n Simple_repeat Simple_repeat 1 57 0 2431 276 64 59 chr17 79120249 79120801 -10383752 + L1ME3 LINE L1 1266 1814 -5308 1777 166 6 13 chr17 79120801 79121114 -10383439 + AluSx SINE Alu 1 311 -1 2431 276 64 59 chr17 79121114 79122152 -10382401 + L1ME3 LINE L1 1814 3075 -4047 1710 156 9 47 chr17 79122166 79122228 -10382325 - L1PB3 LINE L1 -1 6153 6090 2144 97 0 0 chr17 79122228 79122516 -10382037 + AluSg SINE Alu 1 288 -22 1710 156 9 47 chr17 79122516 79122792 -10381761 - L1PB3 LINE L1 -64 6090 5828 2254 77 0 0 chr17 79122792 79123119 -10381434 - AluSg SINE Alu 0 310 1 477 127 14 0 chr17 79123120 79123190 -10381363 + LTR8A LTR ERV1 312 382 -345 2575 85 67 26 chr17 79123190 79123578 -10380975 + MLT2A1 LTR ERVL 1 404 -40 219 80 80 0 chr17 79123578 79123628 -10380925 + (TA)n Simple_repeat Simple_repeat 2 55 0 1281 34 0 0 chr17 79123734 79123882 -10380671 - AluY SINE Alu -163 148 1 412 179 24 0 chr17 79123882 79123966 -10380587 - L1PB3 LINE L1 -317 5837 5752 * 3193 110 13 4 chr17 79123939 79124411 -10380142 - L1PB2 LINE L1 -319 5832 5357 1518 263 34 57 chr17 79124410 79124533 -10380020 + L1ME3 LINE L1 3028 3152 -3789 * 1866 98 49 0 chr17 79124533 79124799 -10379754 + AluSx SINE Alu 16 294 -18 1518 263 34 57 chr17 79124799 79125391 -10379162 + L1ME3 LINE L1 3152 3726 -3215 4807 165 29 36 chr17 79125422 79126432 -10378121 - L1MA4 LINE L1 -7 6293 5295 198 0 0 0 chr17 79126432 79126454 -10378099 + (TTTTC)n Simple_repeat Simple_repeat 1 22 0 4807 165 29 36 chr17 79126454 79126608 -10377945 - L1MA4 LINE L1 -1005 5295 5141 1926 245 76 34 chr17 79126608 79127427 -10377126 + L1ME3 LINE L1 3714 4566 -2375 297 0 0 0 chr17 79127427 79127460 -10377093 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1703 114 0 0 chr17 79127602 79127839 -10376714 - AluSq SINE Alu -76 237 1 3139 236 13 32 chr17 79127839 79128187 -10376366 + L1ME3 LINE L1 4553 4906 -2035 1733 155 4 0 chr17 79128187 79128487 -10376066 + AluSc SINE Alu 1 301 0 3139 236 13 32 chr17 79128487 79129108 -10375445 + L1ME3 LINE L1 4906 5505 -1436 1652 220 61 25 chr17 79129110 79129559 -10374994 + L1ME3 LINE L1 6443 6913 -44 1403 154 116 0 chr17 79129559 79129826 -10374727 - AluJo SINE Alu -14 298 1 1652 220 61 25 chr17 79129826 79129866 -10374687 + L1ME3 LINE L1 6913 6950 -7 785 250 103 36 chr17 79129916 79130332 -10374221 + L1MC5 LINE L1 7508 7951 -10 393 158 79 13 chr17 79130332 79130408 -10374145 + L2 LINE L2 2706 2786 -528 402 264 101 39 chr17 79130423 79130631 -10373922 - MER112 DNA MER1_type -32 228 8 537 285 94 85 chr17 79130747 79131087 -10373466 + L2 LINE L2 2970 3312 -1 335 284 37 9 chr17 79131069 79131178 -10373375 - L2 LINE L2 0 3272 3161 * 414 162 46 12 chr17 79131476 79131740 -10372813 + (TG)n Simple_repeat Simple_repeat 1 273 0 2972 233 27 29 chr17 79131788 79132316 -10372237 + L1ME2 LINE L1 5263 5757 -413 1857 134 0 43 chr17 79132316 79132644 -10371909 + AluSq SINE Alu 1 313 0 2972 233 27 29 chr17 79132644 79133043 -10371510 + L1ME2 LINE L1 5757 6155 -15 387 278 178 18 chr17 79133074 79133435 -10371118 - L2 LINE L2 -261 3011 2565 856 231 205 32 chr17 79133635 79133967 -10370586 - MLT1H LTR MaLR 0 549 143 649 34 11 11 chr17 79133967 79134056 -10370497 + (TATTG)n Simple_repeat Simple_repeat 1 89 0 856 231 205 32 chr17 79134056 79134099 -10370454 - MLT1H LTR MaLR -406 143 109 657 281 12 6 chr17 79134134 79134301 -10370252 + MIR SINE MIR 69 236 -26 228 164 0 49 chr17 79134710 79134771 -10369782 + (TCTCTG)n Simple_repeat Simple_repeat 4 61 0 746 187 161 0 chr17 79135218 79135373 -10369180 + MER5A DNA MER1_type 4 183 -6 240 267 17 0 chr17 79135426 79135486 -10369067 + MIR SINE MIR 12 72 -190 232 414 0 0 chr17 79135511 79135610 -10368943 - L2 LINE L2 -35 3237 3139 324 337 23 0 chr17 79135672 79135758 -10368795 - L2 LINE L2 -1 3312 3225 360 250 10 19 chr17 79135758 79135862 -10368691 - L2 LINE L2 -199 3073 2971 317 320 44 20 chr17 79135887 79136137 -10368416 - L2 LINE L2 -1339 1975 1720 226 259 35 35 chr17 79136173 79136258 -10368295 + MIR SINE MIR 67 151 -111 785 238 21 143 chr17 79136901 79137322 -10367231 - L2 LINE L2 -1 3312 2943 8356 168 7 12 chr17 79137408 79138772 -10365781 + MSTA-int LTR MaLR 181 1537 -114 234 65 0 0 chr17 79138774 79138805 -10365748 + MSTA-int LTR MaLR 1550 1580 0 2102 165 83 10 chr17 79138805 79139204 -10365349 + MSTA LTR MaLR 1 428 0 249 283 80 116 chr17 79139219 79139470 -10365083 + L2 LINE L2 3000 3241 -31 496 349 42 0 chr17 79140287 79140476 -10364077 - L2 LINE L2 -1 3271 3075 199 269 0 0 chr17 79141419 79141471 -10363082 - L2 LINE L2 -336 2977 2926 341 345 0 14 chr17 79141542 79141684 -10362869 - L2 LINE L2 -519 2795 2656 320 221 15 0 chr17 79141697 79141765 -10362788 + MER3 DNA MER1_type 5 73 -136 * 2004 176 37 89 chr17 79141764 79142246 -10362307 + LTR32 LTR ERVL 15 471 0 281 350 24 8 chr17 79142434 79142557 -10361996 - L1ME LINE L1 -439 5682 5558 302 294 94 29 chr17 79143760 79143930 -10360623 + MIR SINE MIR 58 238 -24 360 220 57 144 chr17 79144584 79144848 -10359705 + L1ME4a LINE L1 5858 6098 -23 217 254 32 0 chr17 79145269 79145332 -10359221 + CT-rich Low_complexity Low_complexity 6 70 0 201 267 26 95 chr17 79145877 79145993 -10358560 - MIR SINE MIR -3 259 152 2181 164 11 11 chr17 79146328 79146682 -10357871 + MLT1A1 LTR MaLR 10 363 -2 342 298 11 39 chr17 79147198 79147376 -10357177 + (CATA)n Simple_repeat Simple_repeat 4 176 0 984 205 19 0 chr17 79147685 79147890 -10356663 + LTR16A1 LTR ERVL 247 455 -2 411 254 11 54 chr17 79148037 79148222 -10356331 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 438 341 3 9 chr17 79148094 79148437 -10356116 + (CA)n Simple_repeat Simple_repeat 1 341 0 336 335 0 0 chr17 79148542 79148774 -10355779 + (CA)n Simple_repeat Simple_repeat 1 232 0 182 255 11 0 chr17 79148805 79148899 -10355654 + (CA)n Simple_repeat Simple_repeat 2 96 0 328 230 5 43 chr17 79148925 79149112 -10355441 + (CA)n Simple_repeat Simple_repeat 1 180 0 193 261 9 9 chr17 79149127 79149238 -10355315 + (CA)n Simple_repeat Simple_repeat 2 112 0 1704 200 12 52 chr17 79150427 79150827 -10353726 + MLT1B LTR MaLR 1 384 -6 692 261 62 26 chr17 79150878 79151073 -10353480 + MIR SINE MIR 28 229 -33 296 380 69 9 chr17 79151457 79151673 -10352880 + MIR SINE MIR 32 260 -2 15159 126 16 31 chr17 79151723 79152054 -10352499 - Tigger1 DNA MER2_type -3 2415 2080 2463 65 3 0 chr17 79152054 79152362 -10352191 - AluSp SINE Alu -4 309 1 15159 126 16 31 chr17 79152362 79153609 -10350944 - Tigger1 DNA MER2_type -338 2080 815 1985 102 10 33 chr17 79153609 79153913 -10350640 - AluSg SINE Alu -13 297 1 15159 126 16 31 chr17 79153913 79154410 -10350143 - Tigger1 DNA MER2_type -1603 815 312 357 24 0 0 chr17 79154410 79154452 -10350101 + (GA)n Simple_repeat Simple_repeat 1 42 0 15159 126 16 31 chr17 79154452 79154627 -10349926 - Tigger1 DNA MER2_type -2106 312 203 2237 95 0 13 chr17 79154627 79154932 -10349621 - AluSx SINE Alu -11 301 1 15159 126 16 31 chr17 79154932 79155132 -10349421 - Tigger1 DNA MER2_type -2215 203 1 726 196 16 4 chr17 79156085 79156336 -10348217 + CT-rich Low_complexity Low_complexity 1 254 0 255 204 37 0 chr17 79156352 79156406 -10348147 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 942 259 165 40 chr17 79156477 79157003 -10347550 + MLT1G1 LTR MaLR 1 592 -3 299 295 194 40 chr17 79157006 79157372 -10347181 - L2 LINE L2 -98 3174 2771 190 222 0 0 chr17 79157581 79157617 -10346936 + MIR SINE MIR 83 118 -90 586 264 25 41 chr17 79158133 79158330 -10346223 + MIR SINE MIR 69 262 0 299 224 0 30 chr17 79159371 79159438 -10345115 - L2 LINE L2 -1 3312 3248 729 291 105 16 chr17 79159450 79159708 -10344845 - MLT1L LTR MaLR -6 609 329 624 265 35 48 chr17 79159987 79160063 -10344490 + LTR33 LTR ERVL 2 77 -444 1976 110 23 7 chr17 79160063 79160363 -10344190 - AluSx SINE Alu -7 305 1 624 265 35 48 chr17 79160363 79160516 -10344037 + LTR33 LTR ERVL 77 228 -293 430 318 58 6 chr17 79161265 79161438 -10343115 - MIR SINE MIR -76 186 5 383 0 21 0 chr17 79163036 79163083 -10341470 + (CAAAG)n Simple_repeat Simple_repeat 5 52 0 201 263 52 113 chr17 79163244 79163438 -10341115 + L2 LINE L2 2911 3092 -180 417 292 30 24 chr17 79163526 79163694 -10340859 - MIR SINE MIR -15 247 79 336 225 14 0 chr17 79163709 79163780 -10340773 + MER63 DNA MER1_type 675 746 -90 321 261 23 11 chr17 79163767 79163855 -10340698 + MER63 DNA MER1_type 958 1046 -15 * 263 314 49 10 chr17 79163898 79164000 -10340553 + L2 LINE L2 3167 3272 0 216 154 0 0 chr17 79164421 79164473 -10340080 + (TG)n Simple_repeat Simple_repeat 2 53 0 711 197 0 36 chr17 79165162 79165299 -10339254 + MER45A DNA AcHobo 46 177 -1 215 276 17 0 chr17 79165300 79165358 -10339195 - MER5A DNA MER1_type -35 154 96 546 210 0 0 chr17 79165678 79165778 -10338775 + FRAM SINE Alu 4 103 -73 226 338 15 45 chr17 79166337 79166603 -10337950 + L1 LINE L1 4903 5160 -986 313 378 37 18 chr17 79166622 79166839 -10337714 + L1 LINE L1 5174 5394 -752 367 319 64 28 chr17 79166894 79167035 -10337518 - L1MC/D LINE L1 -1994 5814 5669 1991 107 4 0 chr17 79167256 79167527 -10337026 - AluSx SINE Alu -24 288 17 2029 177 78 0 chr17 79167676 79168037 -10336516 + MLT1B LTR MaLR 1 389 -1 437 296 79 7 chr17 79168111 79168263 -10336290 + MER103 DNA DNA 2 164 -2 388 276 52 58 chr17 79170234 79170408 -10334145 + L2 LINE L2 3140 3312 -1 204 265 0 0 chr17 79170919 79170968 -10333585 + (CCG)n Simple_repeat Simple_repeat 1 49 0 1356 158 62 44 chr17 79171328 79171601 -10332952 + MER52A LTR ERV1 881 1158 -597 342 0 0 0 chr17 79171615 79171653 -10332900 + (CA)n Simple_repeat Simple_repeat 1 38 0 1524 196 11 18 chr17 79171680 79171992 -10332561 - AluSx SINE Alu 0 310 1 335 347 29 41 chr17 79172255 79172497 -10332056 + MIR SINE MIR 10 248 -14 387 292 5 94 chr17 79172737 79172929 -10331624 + MER5A DNA MER1_type 7 181 -8 424 189 0 0 chr17 79173500 79173574 -10330979 - MER52A LTR ERV1 0 1755 1682 * 4820 197 41 50 chr17 79173564 79174725 -10329828 - MER52A LTR ERV1 -559 1196 46 230 296 0 56 chr17 79174920 79174991 -10329562 - MER52A LTR ERV1 -1688 67 1 1395 159 55 8 chr17 79174998 79175255 -10329298 + AluJb SINE Alu 38 306 -6 269 324 52 88 chr17 79176328 79176578 -10327975 - L2 LINE L2 -79 3193 2953 2127 98 10 0 chr17 79177360 79177656 -10326897 - AluSx SINE Alu -13 299 1 350 278 117 4 chr17 79177869 79178011 -10326542 - MIR SINE MIR -64 144 15 937 209 10 20 chr17 79178353 79178554 -10325999 + MER20 DNA MER1_type 18 216 -3 367 219 178 4 chr17 79178637 79178784 -10325769 - MER45A DNA AcHobo 0 178 6 2024 124 6 16 chr17 79179331 79179646 -10324907 - AluSx SINE Alu 0 312 1 586 258 161 23 chr17 79180071 79180288 -10324265 + MIR SINE MIR 2 248 -14 1979 110 11 7 chr17 79180304 79180585 -10323968 + AluSx SINE Alu 17 298 -14 662 250 12 10 chr17 79180589 79180772 -10323781 - MIR SINE MIR -65 197 19 372 146 80 0 chr17 79181512 79181649 -10322904 + CT-rich Low_complexity Low_complexity 2 149 0 222 136 0 0 chr17 79181797 79181841 -10322712 + (T)n Simple_repeat Simple_repeat 1 44 0 1248 155 106 76 chr17 79182130 79182433 -10322120 + AluJo SINE Alu 1 312 0 708 181 0 8 chr17 79182437 79182564 -10321989 + AluJb SINE Alu 184 309 -3 181 339 134 0 chr17 79182790 79182917 -10321636 - MIR3 SINE MIR -61 147 4 239 367 50 57 chr17 79185083 79185380 -10319173 - L2 LINE L2 -10 3262 2968 959 183 27 11 chr17 79185539 79185725 -10318828 - MER5A DNA MER1_type 0 189 1 2179 76 38 0 chr17 79186282 79186573 -10317980 + AluSx SINE Alu 1 302 -10 267 396 49 0 chr17 79187248 79187392 -10317161 - L2 LINE L2 -10 3262 3112 317 311 8 17 chr17 79188604 79188723 -10315830 - MIR SINE MIR -83 179 62 347 286 206 0 chr17 79188898 79189024 -10315529 + MER58 DNA MER1_type 3 271 -70 1384 233 27 33 chr17 79189073 79189438 -10315115 - MLT1A2 LTR MaLR -11 363 1 304 265 0 12 chr17 79189514 79189597 -10314956 + (TG)n Simple_repeat Simple_repeat 1 82 0 237 65 0 0 chr17 79189732 79189763 -10314790 + (CTG)n Simple_repeat Simple_repeat 1 31 0 433 236 57 0 chr17 79190349 79190455 -10314098 + MER53 DNA DNA 30 141 -48 267 255 118 29 chr17 79190398 79190500 -10314053 - MER53 DNA DNA -74 115 5 * 251 300 0 25 chr17 79191967 79192047 -10312506 - L2 LINE L2 -5 3267 3190 479 302 38 0 chr17 79192137 79192296 -10312257 + MIR SINE MIR 21 185 -77 271 327 29 10 chr17 79192413 79192517 -10312036 - L2 LINE L2 -213 3059 2954 1304 245 29 10 chr17 79192855 79193169 -10311384 - MER33 DNA MER1_type -4 320 1 891 216 92 9 chr17 79193685 79193912 -10310641 - MIR SINE MIR -6 256 11 234 62 0 0 chr17 79194778 79194810 -10309743 + (TG)n Simple_repeat Simple_repeat 2 33 0 518 276 119 11 chr17 79197129 79197341 -10307212 - MIR SINE MIR -26 236 6 476 200 84 0 chr17 79197462 79197557 -10306996 - MER81 DNA DNA -11 103 1 1977 86 20 114 chr17 79197689 79198040 -10306513 - AluYb8 SINE Alu 0 318 1 186 152 0 0 chr17 79199390 79199423 -10305130 - L2 LINE L2 -13 3300 3268 * 187 295 16 0 chr17 79199420 79199481 -10305072 + L2 LINE L2 3250 3311 -2 841 293 101 26 chr17 79200653 79201223 -10303330 + L2 LINE L2 2390 3024 -289 703 269 29 10 chr17 79201232 79201440 -10303113 + MIR SINE MIR 2 213 -49 2086 109 0 0 chr17 79201528 79201834 -10302719 + AluSx SINE Alu 1 306 0 413 234 43 123 chr17 79201854 79202089 -10302464 + L2 LINE L2 3079 3294 -19 870 121 0 0 chr17 79202340 79202456 -10302097 - FLAM_C SINE Alu -17 116 1 1675 195 46 46 chr17 79202465 79202880 -10301673 - MLT1D LTR MaLR -1 504 90 2159 128 0 0 chr17 79202909 79203221 -10301332 + AluSx SINE Alu 1 312 0 187 197 0 30 chr17 79203316 79203382 -10301171 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 1784 145 30 14 chr17 79203557 79203853 -10300700 + AluJb SINE Alu 1 301 -11 532 221 49 6 chr17 79203951 79204114 -10300439 - L1ME4a LINE L1 -191 5930 5761 2182 87 6 37 chr17 79204564 79204886 -10299667 - AluSx SINE Alu 0 312 1 437 262 74 27 chr17 79205791 79205940 -10298613 - L2 LINE L2 0 3313 3158 656 217 126 35 chr17 79206418 79206616 -10297937 + MIR SINE MIR 25 240 -22 1188 118 45 0 chr17 79206727 79206905 -10297648 - MER5A DNA MER1_type -3 186 1 329 347 48 6 chr17 79206941 79207108 -10297445 - MIR SINE MIR -2 260 87 311 200 253 0 chr17 79208224 79208319 -10296234 - MER5A DNA MER1_type -32 157 39 312 214 133 10 chr17 79208361 79208459 -10296094 - MER5B DNA MER1_type -21 157 48 216 322 92 0 chr17 79208683 79208770 -10295783 + L2 LINE L2 3147 3241 -31 673 210 64 13 chr17 79212514 79212671 -10291882 - MER5B DNA MER1_type -13 165 1 558 251 71 44 chr17 79212926 79213109 -10291444 - MIR SINE MIR -3 259 72 2126 194 35 33 chr17 79213110 79213569 -10290984 + LTR40b LTR ERVL 3 462 0 295 307 142 37 chr17 79214280 79214498 -10290055 - MIR SINE MIR -2 260 20 1013 176 5 15 chr17 79214517 79214722 -10289831 - L1MB8 LINE L1 -1 6177 5975 756 290 39 55 chr17 79215226 79215685 -10288868 - LTR16C LTR ERVL 0 491 40 318 50 0 0 chr17 79215775 79215815 -10288738 + (CA)n Simple_repeat Simple_repeat 1 40 0 290 169 15 0 chr17 79216379 79216444 -10288109 + (TTCA)n Simple_repeat Simple_repeat 4 69 0 414 280 76 15 chr17 79216617 79216749 -10287804 + L2 LINE L2 3133 3272 0 2088 145 0 0 chr17 79217670 79217966 -10286587 - AluJb SINE Alu -16 296 1 190 284 202 0 chr17 79217968 79218077 -10286476 + L2 LINE L2 2925 3055 -217 428 268 213 11 chr17 79218329 79218512 -10286041 - MIR SINE MIR -38 224 5 271 247 0 41 chr17 79219005 79219078 -10285475 - MIR SINE MIR -111 151 82 250 190 10 110 chr17 79219758 79219858 -10284695 + LTR33 LTR ERVL 37 126 -395 239 272 25 0 chr17 79219814 79219895 -10284658 - MLT1D LTR MaLR -155 350 268 * 332 349 78 6 chr17 79219969 79220135 -10284418 + MER5B DNA MER1_type 1 178 0 202 299 47 37 chr17 79220137 79220244 -10284309 - L3 LINE CR1 -367 1210 1103 2223 110 0 23 chr17 79220546 79220854 -10283699 + AluSx SINE Alu 1 301 -11 410 373 52 30 chr17 79220939 79221210 -10283343 + L2 LINE L2 2996 3272 0 355 306 82 41 chr17 79221417 79221587 -10282966 - MIR SINE MIR -55 207 31 751 159 0 83 chr17 79222923 79223101 -10281452 + FLAM_C SINE Alu 1 166 0 257 267 147 43 chr17 79223687 79223803 -10280750 - L3 LINE CR1 -10 1567 1440 1971 145 0 3 chr17 79223928 79224261 -10280292 + AluSx SINE Alu 1 332 0 2086 157 73 16 chr17 79224266 79224692 -10279861 + L1MC2 LINE L1 5890 6339 -5 319 287 83 76 chr17 79225768 79225925 -10278628 + MIR3 SINE MIR 19 176 -32 420 347 160 7 chr17 79226230 79226680 -10277873 + L2 LINE L2 2063 2581 -733 183 286 18 18 chr17 79226736 79226792 -10277761 + L2 LINE L2 3215 3270 -2 187 326 70 23 chr17 79227011 79227097 -10277456 + L2 LINE L2 2912 3001 -271 1346 241 159 21 chr17 79227113 79227636 -10276917 - MLT1G1 LTR MaLR 0 595 1 256 269 55 0 chr17 79228843 79228969 -10275584 - MIR SINE MIR -33 175 42 350 285 171 0 chr17 79229174 79229297 -10275256 - L2 LINE L2 -21 3251 3108 809 282 142 41 chr17 79229909 79230445 -10274108 - L2 LINE L2 -872 2442 1853 220 380 65 0 chr17 79230615 79230707 -10273846 + L2 LINE L2 3116 3213 -59 3428 201 78 28 chr17 79230707 79231096 -10273457 + L1ME1 LINE L1 4986 5354 -812 1599 172 144 3 chr17 79231096 79231416 -10273137 - MLT1A1 LTR MaLR 0 365 1 3428 201 78 28 chr17 79231416 79231703 -10272850 + L1ME1 LINE L1 5354 5625 -541 26724 29 0 0 chr17 79231703 79235635 -10268918 + L1PA4 LINE L1 2220 6152 -3 3428 201 78 28 chr17 79235635 79236080 -10268473 + L1ME1 LINE L1 5625 6160 -6 358 268 166 29 chr17 79236532 79236737 -10267816 + MIR SINE MIR 30 262 0 736 184 71 0 chr17 79236747 79236915 -10267638 + MER104 DNA MER2_type 1 180 0 260 262 19 28 chr17 79237397 79237504 -10267049 - LTR67 LTR ERVL -24 533 428 1352 139 18 5 chr17 79237940 79238163 -10266390 + L1PB4 LINE L1 5931 6156 0 670 214 69 29 chr17 79238462 79238635 -10265918 + MER5A DNA MER1_type 10 189 0 653 255 65 0 chr17 79238641 79238794 -10265759 + MER5B DNA MER1_type 8 170 -8 493 125 0 0 chr17 79239177 79239265 -10265288 + L1MA5A LINE L1 5995 6082 -215 1722 135 37 17 chr17 79239265 79239562 -10264991 - MER1B DNA MER1_type 0 339 37 1424 79 47 0 chr17 79239573 79239788 -10264765 + L1MA5A LINE L1 6073 6297 0 456 199 72 114 chr17 79240007 79240056 -10264497 + MER5A DNA MER1_type 29 79 -110 2105 99 35 0 chr17 79240056 79240340 -10264213 - AluSp SINE Alu -19 294 1 456 199 72 114 chr17 79240340 79240456 -10264097 + MER5A DNA MER1_type 79 187 -2 313 252 126 0 chr17 79240456 79240538 -10264015 - MIR SINE MIR -91 171 77 1551 194 146 44 chr17 79240558 79241016 -10263537 + MLT1D LTR MaLR 1 505 0 457 271 108 18 chr17 79241448 79241614 -10262939 - MER5A DNA MER1_type -6 183 3 383 270 10 0 chr17 79241626 79241726 -10262827 - MIR3 SINE MIR -27 181 81 957 210 28 5 chr17 79242516 79242730 -10261823 + MER20 DNA MER1_type 1 219 0 530 240 55 55 chr17 79243546 79243729 -10260824 - MIR SINE MIR -61 201 19 248 274 27 0 chr17 79243768 79243841 -10260712 + MER5A DNA MER1_type 17 91 -98 681 96 56 16 chr17 79244244 79244369 -10260184 - MER41B LTR ERV1 -2 633 504 3546 97 14 4 chr17 79244510 79245014 -10259539 + MER41B LTR ERV1 1 509 -126 2141 65 93 11 chr17 79245490 79245768 -10258785 + AluY SINE Alu 1 301 -10 246 310 30 10 chr17 79246121 79246221 -10258332 + L3 LINE CR1 1249 1350 -227 1208 186 18 18 chr17 79246759 79246979 -10257574 - MER58A DNA MER1_type 0 224 5 319 300 50 0 chr17 79247099 79247199 -10257354 - MIR SINE MIR -65 197 93 4723 81 11 9 chr17 79247236 79247868 -10256685 - MER41B LTR ERV1 -2 633 1 185 206 0 0 chr17 79248654 79248688 -10255865 - MIR SINE MIR -59 149 116 624 192 0 40 chr17 79248806 79248931 -10255622 - FLAM_C SINE Alu -11 132 13 284 291 13 0 chr17 79248931 79249010 -10255543 + L2 LINE L2 3217 3296 -17 294 273 79 24 chr17 79249675 79249801 -10254752 + MIR SINE MIR 17 151 -58 279 231 88 16 chr17 79250148 79250306 -10254247 + LTR16A LTR ERVL 127 372 -78 2277 126 0 0 chr17 79250337 79250638 -10253915 - AluSx SINE Alu -11 301 1 922 203 37 0 chr17 79251701 79251864 -10252689 + MER5A DNA MER1_type 21 189 0 319 239 15 0 chr17 79251897 79251964 -10252589 + MER5A DNA MER1_type 39 106 -83 570 198 198 52 chr17 79252610 79252802 -10251751 - L1MA9 LINE L1 -145 6167 5948 2225 121 10 13 chr17 79252957 79253270 -10251283 - AluSx SINE Alu 0 312 1 189 315 244 8 chr17 79253914 79254041 -10250512 - MIR3 SINE MIR -6 202 46 275 239 104 15 chr17 79254223 79254290 -10250263 - L2 LINE L2 -1 3271 3199 225 94 0 0 chr17 79255739 79255771 -10248782 + (TCTCC)n Simple_repeat Simple_repeat 3 34 0 414 309 100 83 chr17 79256696 79257045 -10247508 - L2 LINE L2 -2 3270 2916 183 255 64 0 chr17 79257402 79257449 -10247104 + L2 LINE L2 3262 3311 -2 1984 146 36 7 chr17 79257582 79257956 -10246597 + AluJo SINE Alu 1 383 0 369 302 43 22 chr17 79257962 79258101 -10246452 - MIR3 SINE MIR -13 195 54 1735 222 92 24 chr17 79258334 79258840 -10245713 - MLT1G3 LTR MaLR 0 530 52 2469 113 14 11 chr17 79258840 79259203 -10245350 + THE1B LTR MaLR 1 364 0 1735 222 92 24 chr17 79259203 79259239 -10245314 - MLT1G3 LTR MaLR -478 52 20 276 197 0 33 chr17 79259283 79259344 -10245209 - L2 LINE L2 0 3313 3255 267 31 0 0 chr17 79260670 79260702 -10243851 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 231 274 0 0 chr17 79260704 79260755 -10243798 - L2 LINE L2 -9 3263 3213 366 296 68 17 chr17 79261275 79261451 -10243102 + MER20B DNA MER1_type 1 185 -598 2378 81 0 0 chr17 79263308 79263616 -10240937 - AluY SINE Alu -2 309 2 183 398 71 15 chr17 79264188 79264512 -10240041 + L2 LINE L2 2004 2345 -969 1337 197 84 38 chr17 79264514 79264885 -10239668 - MLT1C LTR MaLR -7 460 73 670 242 107 9 chr17 79265159 79265374 -10239179 - MER106A DNA MER1_type 0 236 1 193 345 138 0 chr17 79265934 79266050 -10238503 + L2 LINE L2 3126 3257 -15 186 43 0 0 chr17 79266053 79266076 -10238477 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1714 114 0 0 chr17 79266510 79266747 -10237806 + AluSx SINE Alu 1 237 -75 213 39 0 0 chr17 79266795 79266821 -10237732 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 342 0 0 0 chr17 79266848 79266886 -10237667 + (TG)n Simple_repeat Simple_repeat 1 38 0 2578 138 39 2 chr17 79267171 79267584 -10236969 + MSTA LTR MaLR 1 428 0 1681 232 75 23 chr17 79267856 79268335 -10236218 - MLT1D LTR MaLR -1 504 1 442 310 57 0 chr17 79269393 79269551 -10235002 + MIR SINE MIR 21 187 -75 404 212 12 0 chr17 79270967 79271052 -10233501 - MIR SINE MIR -96 166 81 281 304 64 16 chr17 79271811 79271936 -10232617 + MIR SINE MIR 16 146 -62 282 160 0 0 chr17 79272462 79272512 -10232041 + T-rich Low_complexity Low_complexity 1 50 0 878 99 0 99 chr17 79272518 79272670 -10231883 - AluSq SINE Alu -139 174 38 2232 143 28 36 chr17 79272727 79272837 -10231716 + MLT1B LTR MaLR 1 110 -280 2089 92 17 14 chr17 79272837 79273129 -10231424 + AluSc SINE Alu 1 293 -16 2232 143 28 36 chr17 79273129 79273411 -10231142 + MLT1B LTR MaLR 110 390 0 521 239 0 13 chr17 79274412 79274567 -10229986 + CT-rich Low_complexity Low_complexity 1 153 0 857 208 25 15 chr17 79275878 79276075 -10228478 - LTR16C LTR ERVL -3 488 290 705 261 27 5 chr17 79276491 79276675 -10227878 + MIR SINE MIR 46 233 -29 2153 114 3 0 chr17 79276780 79277078 -10227475 - AluSg SINE Alu -11 299 1 450 331 6 6 chr17 79278631 79278794 -10225759 + MIR SINE MIR 3 165 -97 242 344 12 49 chr17 79278876 79279039 -10225514 - MIR SINE MIR -86 176 20 374 276 52 58 chr17 79279862 79280036 -10224517 - L2 LINE L2 -1 3312 3140 437 296 79 7 chr17 79281968 79282120 -10222433 - MER103 DNA DNA -2 164 2 2042 174 78 0 chr17 79282194 79282555 -10221998 - MLT1B LTR MaLR -1 389 1 2062 112 0 0 chr17 79282704 79282982 -10221571 + AluSx SINE Alu 17 294 -18 433 339 26 46 chr17 79283004 79283199 -10221354 - MIR SINE MIR -31 231 41 331 269 186 0 chr17 79284757 79284902 -10219651 + MER96 DNA MER1_type 4 175 0 2169 106 3 0 chr17 79285002 79285303 -10219250 + AluY SINE Alu 1 302 -9 912 240 119 57 chr17 79285476 79285897 -10218656 + MLT1C LTR MaLR 4 450 -17 386 281 50 19 chr17 79285905 79286065 -10218488 + L3 LINE CR1 1261 1425 -152 262 351 0 0 chr17 79286497 79286591 -10217962 - MER5A DNA MER1_type -80 109 16 450 266 75 17 chr17 79286943 79287116 -10217437 - MIR SINE MIR -74 188 6 560 279 38 37 chr17 79288968 79289209 -10215344 + MIR SINE MIR 26 262 0 296 219 16 0 chr17 79290250 79290314 -10214239 - L2 LINE L2 -1 3312 3248 712 291 105 16 chr17 79290326 79290584 -10213969 - MLT1L LTR MaLR -6 609 329 637 265 35 48 chr17 79290863 79290939 -10213614 + LTR33 LTR ERVL 2 77 -444 2006 110 23 7 chr17 79290939 79291239 -10213314 - AluSx SINE Alu -7 305 1 637 265 35 48 chr17 79291239 79291392 -10213161 + LTR33 LTR ERVL 77 228 -293 403 318 58 6 chr17 79292141 79292314 -10212239 - MIR SINE MIR -76 186 5 464 0 18 0 chr17 79293913 79293969 -10210584 + (CAAAG)n Simple_repeat Simple_repeat 1 57 0 403 298 30 24 chr17 79294412 79294580 -10209973 - MIR SINE MIR -15 247 79 317 225 14 0 chr17 79294595 79294666 -10209887 + MER63 DNA MER1_type 675 746 -316 314 261 23 11 chr17 79294653 79294741 -10209812 + MER63 DNA MER1_type 957 1045 -15 * 255 283 50 10 chr17 79294787 79294886 -10209667 + L2 LINE L2 3211 3313 0 216 154 0 0 chr17 79295308 79295360 -10209193 + (TG)n Simple_repeat Simple_repeat 2 53 0 711 197 0 36 chr17 79296049 79296186 -10208367 + MER45A DNA AcHobo 46 177 -1 229 259 17 0 chr17 79296187 79296245 -10208308 - MER5A DNA MER1_type -35 154 96 546 210 0 0 chr17 79296565 79296665 -10207888 + FRAM SINE Alu 4 103 -73 226 338 15 45 chr17 79297224 79297490 -10207063 + L1ME4a LINE L1 4903 5160 -986 313 378 37 18 chr17 79297509 79297726 -10206827 + L1ME4a LINE L1 5174 5394 -752 367 319 64 28 chr17 79297781 79297922 -10206631 - L1MC/D LINE L1 -1994 5814 5669 315 276 54 69 chr17 79298078 79298136 -10206417 - MIR SINE MIR 0 262 205 1899 112 42 11 chr17 79298136 79298422 -10206131 - AluSx SINE Alu -17 295 1 315 276 54 69 chr17 79298422 79298566 -10205987 - MIR SINE MIR -57 205 63 1312 150 122 12 chr17 79299484 79299781 -10204772 - AluSx SINE Alu 0 325 1 513 259 127 68 chr17 79299816 79300314 -10204239 + L1ME4a LINE L1 5566 6092 -29 189 107 0 0 chr17 79301133 79301161 -10203392 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 274 184 171 0 chr17 79301884 79301960 -10202593 - L2 LINE L2 -8 3305 3217 663 249 104 0 chr17 79302111 79302332 -10202221 - L2 LINE L2 -705 2609 2366 1001 253 105 43 chr17 79303428 79303820 -10200733 + LTR16C LTR ERVL 75 490 -1 2264 98 0 3 chr17 79304358 79304655 -10199898 - AluSg SINE Alu -14 296 1 2184 101 0 19 chr17 79304656 79304972 -10199581 - AluSg SINE Alu 0 310 1 946 93 0 0 chr17 79305535 79305664 -10198889 - L1PA6 LINE L1 0 6154 6026 309 260 75 48 chr17 79306167 79306313 -10198240 - MER117 DNA MER1_type -41 156 7 339 257 174 0 chr17 79306701 79306810 -10197743 + MER94 DNA DNA 4 131 -3 233 228 47 110 chr17 79309008 79309135 -10195418 - MER5A DNA MER1_type -24 165 47 519 260 78 7 chr17 79309167 79309321 -10195232 + MER5B DNA MER1_type 13 177 -1 1584 201 78 29 chr17 79310177 79310586 -10193967 - L1MB4 LINE L1 -1 6179 5751 229 316 25 0 chr17 79310615 79310694 -10193859 + L2 LINE L2 2549 2629 -685 337 176 0 0 chr17 79310719 79310787 -10193766 - L1MB8 LINE L1 -1 6177 6110 403 149 0 0 chr17 79310787 79310854 -10193699 + MER41B LTR ERV1 481 547 -88 2199 184 80 18 chr17 79310862 79311372 -10193181 - L1MB8 LINE L1 -54 6124 5583 573 327 67 12 chr17 79311381 79311708 -10192845 + L2 LINE L2 2633 2977 -337 1300 220 31 90 chr17 79311709 79312133 -10192420 - MLT1C LTR MaLR 0 467 74 757 135 15 15 chr17 79312133 79312266 -10192287 + FLAM_C SINE Alu 1 133 0 1300 220 31 90 chr17 79312266 79312331 -10192222 - MLT1C LTR MaLR -393 74 7 589 226 8 0 chr17 79312672 79312796 -10191757 - L1MB5 LINE L1 -325 5849 5725 1334 153 4 0 chr17 79312803 79313044 -10191509 - L1MA6 LINE L1 -17 6283 6042 973 230 68 28 chr17 79313766 79313871 -10190682 + MLT1H LTR MaLR 12 111 -438 1169 231 143 36 chr17 79313871 79314291 -10190262 - MLT1C LTR MaLR -2 465 1 973 230 68 28 chr17 79314291 79314437 -10190116 + MLT1H LTR MaLR 111 273 -276 541 257 129 42 chr17 79314407 79314648 -10189905 + MLT1H LTR MaLR 288 549 0 * 2026 122 14 0 chr17 79314729 79315043 -10189510 + AluSg1 SINE Alu 1 318 0 2206 100 0 4 chr17 79315129 79315458 -10189095 + AluSg SINE Alu 1 328 0 259 292 115 0 chr17 79316634 79316730 -10187823 + MIR SINE MIR 117 223 -39 441 333 101 8 chr17 79316895 79317132 -10187421 + MIR SINE MIR 2 260 -2 2010 137 32 57 chr17 79318584 79318956 -10185597 + THE1B LTR MaLR 2 364 0 285 226 54 11 chr17 79319133 79319226 -10185327 - Charlie4a DNA MER1_type -92 416 320 1941 152 23 29 chr17 79319229 79319539 -10185014 - AluJb SINE Alu -4 308 1 1465 200 29 29 chr17 79319548 79319893 -10184660 - Charlie4a DNA MER1_type -153 355 11 254 294 37 9 chr17 79320397 79320506 -10184047 - MIR3 SINE MIR -51 157 46 206 276 155 9 chr17 79321470 79321586 -10182967 - MIR SINE MIR 0 262 130 193 195 24 0 chr17 79322742 79322783 -10181770 - L2 LINE L2 -205 3067 3026 357 245 245 33 chr17 79323162 79323346 -10181207 - MIR SINE MIR -39 223 1 309 204 57 11 chr17 79324123 79324211 -10180342 + L3 LINE CR1 1398 1489 -88 293 269 58 10 chr17 79324238 79324342 -10180211 - MIR SINE MIR -73 189 81 557 208 117 13 chr17 79325615 79325769 -10178784 + LTR16C LTR ERVL 316 485 -6 955 266 37 0 chr17 79326754 79326998 -10177555 - MIR SINE MIR -5 257 5 2130 110 11 0 chr17 79327103 79327407 -10177146 + AluSx SINE Alu 1 307 0 1883 224 21 47 chr17 79327436 79327901 -10176652 + MLT2B1 LTR ERVL 1 452 -68 450 53 0 0 chr17 79327901 79327958 -10176595 + (CA)n Simple_repeat Simple_repeat 2 58 0 1883 224 21 47 chr17 79327958 79328020 -10176533 + MLT2B1 LTR ERVL 452 514 -6 621 296 55 38 chr17 79328528 79328709 -10175844 + LTR67 LTR ERVL 257 446 -111 1690 145 42 53 chr17 79328709 79329046 -10175507 + THE1C LTR MaLR 1 335 -40 2297 103 3 7 chr17 79329046 79329346 -10175207 - AluSx SINE Alu -13 299 1 1690 145 42 53 chr17 79329346 79329387 -10175166 + THE1C LTR MaLR 335 375 0 621 296 55 38 chr17 79329387 79329496 -10175057 + LTR67 LTR ERVL 446 552 -5 372 246 70 18 chr17 79329590 79329704 -10174849 - MIR3 SINE MIR -81 127 8 259 340 82 6 chr17 79330930 79331089 -10173464 + MIR SINE MIR 21 191 -71 2580 68 3 0 chr17 79331368 79331675 -10172878 + AluY SINE Alu 1 308 -3 547 228 57 0 chr17 79332661 79332784 -10171769 + MIR SINE MIR 25 154 -108 322 393 11 11 chr17 79335108 79335291 -10169262 + L2 LINE L2 2576 2758 -556 2067 115 50 31 chr17 79335617 79335974 -10168579 + THE1B LTR MaLR 1 364 0 225 143 24 0 chr17 79336094 79336136 -10168417 - L2 LINE L2 -83 3230 3188 1475 170 122 4 chr17 79336235 79336482 -10168071 + AluJo SINE Alu 1 276 -36 196 146 0 104 chr17 79337238 79337286 -10167267 + L3 LINE CR1 1532 1574 -3 267 268 85 0 chr17 79337839 79337921 -10166632 - MIR SINE MIR -117 145 57 201 74 0 0 chr17 79339394 79339421 -10165132 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 579 300 22 6 chr17 79339795 79339975 -10164578 + MIR SINE MIR 42 224 -38 352 267 9 9 chr17 79340470 79340575 -10163978 + MER5A DNA MER1_type 4 108 -81 1971 141 0 3 chr17 79340591 79340881 -10163672 - AluJb SINE Alu -23 289 1 1128 161 16 16 chr17 79340891 79341083 -10163470 - AluSg/x SINE Alu 0 312 121 794 250 0 32 chr17 79341257 79341473 -10163080 - MER3 DNA MER1_type 0 209 1 829 281 101 6 chr17 79342218 79342563 -10161990 + MLT1J2 LTR MaLR 73 450 0 189 39 0 0 chr17 79342843 79342869 -10161684 + L2 LINE L2 3027 3052 -220 1741 256 53 33 chr17 79343074 79343653 -10160900 + MLT1E LTR MaLR 1 591 -2 216 97 0 0 chr17 79344299 79344330 -10160223 + (TAAAA)n Simple_repeat Simple_repeat 5 35 0 260 312 21 0 chr17 79344493 79344586 -10159967 - MLT1F1 LTR MaLR -442 125 31 187 324 9 65 chr17 79345717 79345825 -10158728 - MIR SINE MIR -44 218 117 1528 230 121 58 chr17 79347581 79348137 -10156416 + MLT1E LTR MaLR 1 591 -2 716 276 84 0 chr17 79348188 79348391 -10156162 + MIR SINE MIR 2 221 -41 2116 120 3 10 chr17 79350435 79350783 -10153770 + AluSx SINE Alu 3 312 0 850 280 92 41 chr17 79350804 79351193 -10153360 - MLT1I LTR MaLR 0 409 1 184 293 66 47 chr17 79351215 79351321 -10153232 + L3 LINE CR1 1324 1431 -146 1374 171 22 119 chr17 79351437 79351841 -10152712 + MLT1A1 LTR MaLR 1 365 0 1106 214 5 14 chr17 79352056 79352276 -10152277 + MLT1E LTR MaLR 376 593 0 554 280 79 21 chr17 79352620 79352862 -10151691 - MIR SINE MIR 0 262 2 225 0 0 0 chr17 79353467 79353492 -10151061 + (CA)n Simple_repeat Simple_repeat 1 25 0 561 228 42 58 chr17 79353607 79353796 -10150757 - MLT1L LTR MaLR -6 609 424 1847 240 124 18 chr17 79353914 79354464 -10150089 - L1MD3 LINE L1 -8 7987 7380 243 0 0 0 chr17 79354464 79354491 -10150062 + (TAAAAA)n Simple_repeat Simple_repeat 4 30 0 493 290 0 22 chr17 79354884 79355022 -10149531 + MIR SINE MIR 23 157 -105 294 282 107 0 chr17 79355513 79355616 -10148937 + MIR SINE MIR 30 143 -65 1947 157 44 29 chr17 79356202 79356615 -10147938 + L1MC3 LINE L1 7351 7769 -16 243 354 0 13 chr17 79357134 79357213 -10147340 + L2 LINE L2 3217 3294 -19 547 197 26 15 chr17 79357750 79358026 -10146527 + CT-rich Low_complexity Low_complexity 1 279 0 1531 203 7 18 chr17 79358031 79358312 -10146241 - AluJb SINE Alu -34 278 1 968 158 23 6 chr17 79358312 79358444 -10146109 - AluJo SINE Alu -177 135 1 501 267 121 15 chr17 79358634 79358840 -10145713 + L1MEd LINE L1 441 668 -5451 364 275 108 28 chr17 79358858 79359076 -10145477 + L1M3c LINE L1 1076 1506 -4554 1526 265 39 61 chr17 79359134 79359181 -10145372 + L1ME1 LINE L1 2 48 -6375 243 0 0 0 chr17 79359181 79359208 -10145345 + (A)n Simple_repeat Simple_repeat 1 27 0 1526 265 39 61 chr17 79359208 79359745 -10144808 + L1ME1 LINE L1 48 599 -5824 229 256 98 24 chr17 79359801 79359883 -10144670 + L1ME1 LINE L1 526 613 -5810 2689 271 50 25 chr17 79359930 79360895 -10143658 + L1ME1 LINE L1 697 1694 -4887 537 246 84 30 chr17 79360995 79361292 -10143261 + L1ME1 LINE L1 2492 2804 -4318 800 159 0 8 chr17 79361302 79361434 -10143119 - FLAM_C SINE Alu -12 131 1 5216 236 34 36 chr17 79361455 79363287 -10141266 + L1ME1 LINE L1 2825 4623 -2318 310 151 0 0 chr17 79363287 79363340 -10141213 + Alu SINE Alu 250 302 0 3455 238 48 40 chr17 79363387 79364275 -10140278 + L1ME1 LINE L1 5176 6056 -905 1994 114 111 18 chr17 79364275 79364607 -10139946 + THE1B LTR MaLR 1 363 -1 3455 238 48 40 chr17 79364607 79364877 -10139676 + L1ME1 LINE L1 6056 6322 -639 1127 187 73 127 chr17 79364877 79365091 -10139462 + MLT1D LTR MaLR 1 225 -280 1926 113 43 10 chr17 79365091 79365391 -10139162 + AluJb SINE Alu 3 312 0 1127 187 73 127 chr17 79365391 79365710 -10138843 + MLT1D LTR MaLR 225 505 0 3455 238 48 40 chr17 79365710 79366249 -10138304 + L1ME1 LINE L1 6322 6953 -8 545 273 0 12 chr17 79366281 79366453 -10138100 + HAL1 LINE L1 1427 1596 -911 249 220 64 133 chr17 79366459 79366632 -10137921 - LTR33A LTR ERVL -3 520 360 23 33 0 0 chr17 79367019 79367049 -10137504 + AT_rich Low_complexity Low_complexity 1 30 0 1721 151 135 3 chr17 79367123 79367441 -10137112 + MER46B DNA MER2_type 1 235 -1 1514 195 44 86 chr17 79367575 79367815 -10136738 - MLT1C LTR MaLR -72 395 177 1789 155 3 3 chr17 79367815 79368111 -10136442 - AluJo SINE Alu -16 296 1 1514 195 44 86 chr17 79368111 79368275 -10136278 - MLT1C LTR MaLR -290 177 8 1893 122 3 0 chr17 79368582 79368870 -10135683 + AluSx SINE Alu 22 310 -2 201 373 17 17 chr17 79370371 79370489 -10134064 + MIR SINE MIR 33 150 -112 320 106 0 0 chr17 79370558 79370605 -10133948 + MER46A DNA MER2_type 2 48 -188 1272 106 41 46 chr17 79370605 79370823 -10133730 + MER46A DNA MER2_type 17 233 -3 783 259 15 15 chr17 79370826 79371023 -10133530 - MIR SINE MIR -30 232 36 323 355 141 25 chr17 79371581 79371823 -10132730 - L2 LINE L2 -5 3308 3039 891 271 173 14 chr17 79371857 79372226 -10132327 - LTR33 LTR ERVL -81 440 13 252 266 31 0 chr17 79372245 79372309 -10132244 - L2 LINE L2 -239 3074 3009 270 81 0 0 chr17 79373216 79373253 -10131300 + (CA)n Simple_repeat Simple_repeat 2 38 0 518 304 59 46 chr17 79373667 79374081 -10130472 + L2 LINE L2 2748 3171 -142 203 288 0 17 chr17 79374132 79374191 -10130362 + L2 LINE L2 3180 3237 -76 2842 199 25 33 chr17 79374209 79374784 -10129769 + MER77 LTR ERV1 54 601 -4 237 366 0 21 chr17 79374806 79374899 -10129654 + L2 LINE L2 3177 3267 -5 254 363 120 21 chr17 79374992 79375226 -10129327 + L2 LINE L2 2872 3128 -144 593 232 42 21 chr17 79375330 79375472 -10129081 + MLT1E LTR MaLR 1 145 -448 491 212 10 2 chr17 79375788 79375912 -10128641 + MIR SINE MIR 37 162 -62 1741 153 16 3 chr17 79375913 79376221 -10128332 + AluJb SINE Alu 1 312 0 294 208 169 0 chr17 79376241 79376318 -10128235 + MER94 DNA DNA 1 90 -44 612 286 105 78 chr17 79376432 79376567 -10127986 + L2 LINE L2 1554 1684 -1588 2044 105 3 17 chr17 79376567 79376863 -10127690 - AluSg SINE Alu -18 292 1 612 286 105 78 chr17 79376863 79377460 -10127093 + L2 LINE L2 1684 3271 -1 308 270 27 72 chr17 79378289 79378348 -10126205 + MIR SINE MIR 48 101 -161 1119 235 0 0 chr17 79378348 79378569 -10125984 - MER58A DNA MER1_type 0 224 4 308 270 27 72 chr17 79378569 79378620 -10125933 + MIR SINE MIR 101 153 -109 386 226 24 0 chr17 79381153 79381237 -10123316 - LTR16C LTR ERVL 0 491 406 247 326 57 46 chr17 79381235 79381410 -10123143 - LTR16C LTR ERVL -187 304 128 * 263 190 11 0 chr17 79381487 79381545 -10123008 + FRAM/FAM SINE Alu 49 89 -77 1942 128 0 0 chr17 79381753 79382089 -10122464 + AluSx SINE Alu 2 337 0 850 274 109 53 chr17 79382211 79382700 -10121853 + L1MC4a LINE L1 5257 5780 -2028 1716 172 7 17 chr17 79382700 79383002 -10121551 + AluJb SINE Alu 1 299 -13 850 274 109 53 chr17 79383002 79383055 -10121498 + L1MC4a LINE L1 5780 5829 -1979 684 249 174 8 chr17 79383578 79383843 -10120710 - MLT1H LTR MaLR 0 549 241 441 257 106 12 chr17 79385023 79385288 -10119265 + L1ME LINE L1 5526 5837 -284 662 180 0 9 chr17 79385288 79385399 -10119154 - FRAM SINE Alu -21 155 46 185 204 122 92 chr17 79386234 79386332 -10118221 - MIR SINE MIR -133 129 29 1083 137 1 2 chr17 79486699 79487527 -10017026 + (CATTC)n Satellite Satellite 1 826 0 835 122 6 6 chr17 79487542 79487706 -10016847 + (CATTC)n Satellite Satellite 2 165 0 1029 158 0 8 chr17 79487731 79488083 -10016470 + (CATTC)n Satellite Satellite 1 350 0 963 139 0 0 chr17 79488111 79488291 -10016262 + (CATTC)n Satellite Satellite 1 180 0 1030 83 6 6 chr17 79488337 79488506 -10016047 + (CATTC)n Satellite Satellite 2 170 0 977 124 6 22 chr17 79488521 79488880 -10015673 + (CATTC)n Satellite Satellite 1 354 0 1032 111 0 0 chr17 79488895 79489075 -10015478 + (CATTC)n Satellite Satellite 1 180 0 915 152 3 0 chr17 79489105 79489445 -10015108 + (CATTC)n Satellite Satellite 1 341 0 1044 143 0 0 chr17 79489458 79489753 -10014800 + (CATTC)n Satellite Satellite 1 295 0 1116 96 0 0 chr17 79489786 79489963 -10014590 + (CATTC)n Satellite Satellite 4 180 0 1221 127 3 3 chr17 79489983 79490575 -10013978 + (CATTC)n Satellite Satellite 1 592 0 1122 134 0 3 chr17 79490596 79490930 -10013623 + (CATTC)n Satellite Satellite 2 334 0 991 130 3 3 chr17 79490947 79491257 -10013296 + (CATTC)n Satellite Satellite 1 310 0 1050 146 2 2 chr17 79491270 79491764 -10012789 + (CATTC)n Satellite Satellite 1 494 0 904 123 6 6 chr17 79491776 79491955 -10012598 + (CATTC)n Satellite Satellite 2 180 0 851 150 0 17 chr17 79491966 79492260 -10012293 + (CATTC)n Satellite Satellite 1 289 0 270 205 0 0 chr17 79492295 79492378 -10012175 + (CATTC)n Satellite Satellite 1 83 0 1143 89 0 0 chr17 79492396 79492575 -10011978 + (CATTC)n Satellite Satellite 2 180 0 927 139 0 0 chr17 79492600 79492780 -10011773 + (CATTC)n Satellite Satellite 1 180 0 1023 143 0 3 chr17 79492791 79493125 -10011428 + (CATTC)n Satellite Satellite 2 334 0 797 158 6 0 chr17 79493147 79493324 -10011229 + (CATTC)n Satellite Satellite 3 180 0 1038 132 2 12 chr17 79493335 79494039 -10010514 + (CATTC)n Satellite Satellite 1 696 0 984 136 0 0 chr17 79494052 79494414 -10010139 + (CATTC)n Satellite Satellite 1 362 0 198 143 0 0 chr17 79494442 79494477 -10010076 + (CATTC)n Satellite Satellite 2 36 0 1029 157 2 9 chr17 79494492 79495018 -10009535 + (CATTC)n Satellite Satellite 1 522 0 934 98 6 6 chr17 79495032 79495195 -10009358 + (CATTC)n Satellite Satellite 2 164 0 1012 96 6 6 chr17 79495222 79495400 -10009153 + (CATTC)n Satellite Satellite 2 179 0 1104 112 7 7 chr17 79495412 79495950 -10008603 + (CATTC)n Satellite Satellite 1 538 0 954 122 0 0 chr17 79495965 79496145 -10008408 + (CATTC)n Satellite Satellite 1 180 0 666 183 0 0 chr17 79496197 79496361 -10008192 + (CATTC)n Satellite Satellite 3 166 0 968 119 6 0 chr17 79496386 79496563 -10007990 + (CATTC)n Satellite Satellite 2 179 0 799 137 4 4 chr17 79496575 79496804 -10007749 + (CATTC)n Satellite Satellite 1 229 0 894 149 0 0 chr17 79496834 79497183 -10007370 + (CATTC)n Satellite Satellite 1 349 0 1134 114 0 19 chr17 79497199 79497744 -10006809 + (CATTC)n Satellite Satellite 1 360 0 258 95 0 0 chr17 79497756 79497798 -10006755 + (CATTC)n Satellite Satellite 3 44 0 705 171 0 0 chr17 79497810 79497980 -10006573 + (CATTC)n Satellite Satellite 2 171 0 1068 106 0 0 chr17 79498030 79498209 -10006344 + (CATTC)n Satellite Satellite 2 180 0 354 61 0 0 chr17 79498229 79498278 -10006275 + (CATTC)n Satellite Satellite 2 50 0 984 133 0 0 chr17 79498302 79498482 -10006071 + (CATTC)n Satellite Satellite 1 180 0 1125 125 0 14 chr17 79498493 79498962 -10005591 + (CATTC)n Satellite Satellite 1 462 0 768 160 0 0 chr17 79498979 79499210 -10005343 + (CATTC)n Satellite Satellite 1 231 0 744 162 0 0 chr17 79499230 79499397 -10005156 + (CATTC)n Satellite Satellite 4 170 0 1119 102 0 0 chr17 79499410 79499587 -10004966 + (CATTC)n Satellite Satellite 4 180 0 958 112 6 6 chr17 79499598 79499777 -10004776 + (CATTC)n Satellite Satellite 2 180 0 752 148 6 0 chr17 79499789 79499958 -10004595 + (CATTC)n Satellite Satellite 3 172 0 198 143 0 0 chr17 79499972 79500007 -10004546 + (CATTC)n Satellite Satellite 2 36 0 906 161 2 6 chr17 79500022 79500548 -10004005 + (CATTC)n Satellite Satellite 1 524 0 922 124 6 6 chr17 79500574 79500751 -10003802 + (CATTC)n Satellite Satellite 4 180 0 1098 100 0 0 chr17 79500781 79500961 -10003592 + (CATTC)n Satellite Satellite 1 180 0 1044 124 0 0 chr17 79500984 79501328 -10003225 + (CATTC)n Satellite Satellite 1 344 0 753 172 0 0 chr17 79501351 79501531 -10003022 + (CATTC)n Satellite Satellite 1 180 0 1092 125 0 4 chr17 79501548 79502111 -10002442 + (CATTC)n Satellite Satellite 1 560 0 812 138 6 0 chr17 79502122 79502289 -10002264 + (CATTC)n Satellite Satellite 2 169 0 1146 125 0 11 chr17 79502325 79502602 -10001951 + (CATTC)n Satellite Satellite 1 275 0 780 159 0 0 chr17 79502619 79502795 -10001758 + (CATTC)n Satellite Satellite 5 180 0 912 141 0 0 chr17 79502815 79502992 -10001561 + (CATTC)n Satellite Satellite 1 177 0 700 131 11 38 chr17 79503026 79503209 -10001344 + (CATTC)n Satellite Satellite 2 179 0 1020 137 0 21 chr17 79503251 79503794 -10000759 + (CATTC)n Satellite Satellite 1 531 0 1039 102 3 26 chr17 79503837 79504231 -10000322 + (CATTC)n Satellite Satellite 1 384 0 834 162 0 0 chr17 79504280 79504459 -10000094 + (CATTC)n Satellite Satellite 1 179 0 1092 111 0 0 chr17 79504480 79504660 -9999893 + (CATTC)n Satellite Satellite 1 180 0 694 188 0 3 chr17 79504672 79504981 -9999572 + (CATTC)n Satellite Satellite 1 307 0 1068 140 2 3 chr17 79504997 79505911 -9998642 + (CATTC)n Satellite Satellite 1 913 0 948 151 2 4 chr17 79505926 79506460 -9998093 + (CATTC)n Satellite Satellite 1 532 0 901 130 6 6 chr17 79506488 79506665 -9997888 + (CATTC)n Satellite Satellite 4 180 0 1066 89 6 6 chr17 79506691 79506870 -9997683 + (CATTC)n Satellite Satellite 2 180 0 1034 121 3 19 chr17 79506903 79507264 -9997289 + (CATTC)n Satellite Satellite 4 356 0 630 188 0 0 chr17 79507291 79507461 -9997092 + (CATTC)n Satellite Satellite 3 172 0 1183 67 6 6 chr17 79507489 79507669 -9996884 + (CATTC)n Satellite Satellite 1 180 0 941 142 0 17 chr17 79507710 79508009 -9996544 + (CATTC)n Satellite Satellite 1 294 0 669 192 0 0 chr17 79508021 79508329 -9996224 + (CATTC)n Satellite Satellite 1 308 0 1224 127 2 2 chr17 79508345 79509283 -9995270 + (CATTC)n Satellite Satellite 1 937 0 982 107 6 6 chr17 79509299 79509477 -9995076 + (CATTC)n Satellite Satellite 2 179 0 948 162 0 3 chr17 79509494 79509845 -9994708 + (CATTC)n Satellite Satellite 2 351 0 949 122 6 6 chr17 79509873 79510053 -9994500 + (CATTC)n Satellite Satellite 1 180 0 1034 101 0 0 chr17 79510079 79510247 -9994306 + (CATTC)n Satellite Satellite 2 169 0 888 141 0 0 chr17 79510261 79510648 -9993905 + (CATTC)n Satellite Satellite 1 387 0 843 162 0 0 chr17 79510665 79511028 -9993525 + (CATTC)n Satellite Satellite 1 363 0 1149 114 0 4 chr17 79511042 79511498 -9993055 + (CATTC)n Satellite Satellite 1 454 0 213 119 0 0 chr17 79511513 79511555 -9992998 + (CATTG)n Simple_repeat Simple_repeat 4 45 0 1142 162 1 0 chr17 79511564 79512376 -9992177 + (CATTC)n Satellite Satellite 1 813 0 846 128 3 11 chr17 79512389 79512781 -9991772 + (CATTC)n Satellite Satellite 1 388 0 675 151 5 32 chr17 79512801 79512986 -9991567 + (CATTC)n Satellite Satellite 1 180 0 893 138 0 21 chr17 79512997 79513246 -9991307 + (CATTC)n Satellite Satellite 1 243 0 1146 92 0 0 chr17 79513257 79513431 -9991122 + (CATTC)n Satellite Satellite 2 175 0 882 145 2 5 chr17 79513448 79514262 -9990291 + (CATTC)n Satellite Satellite 1 811 0 903 128 0 0 chr17 79514385 79514549 -9990004 + (GAATG)n Satellite Satellite 2 165 0 1125 104 0 0 chr17 79514561 79514799 -9989754 + (GAATG)n Satellite Satellite 1 238 0 1106 99 0 6 chr17 79514810 79514991 -9989562 + (GAATG)n Satellite Satellite 1 180 0 873 145 0 0 chr17 79515017 79515196 -9989357 + (GAATG)n Satellite Satellite 1 179 0 1110 125 0 2 chr17 79515212 79515665 -9988888 + (GAATG)n Satellite Satellite 1 631 0 860 147 0 21 chr17 79515676 79515925 -9988628 + (GAATG)n Satellite Satellite 1 243 0 729 141 5 32 chr17 79515936 79516121 -9988432 + (GAATG)n Satellite Satellite 1 180 0 1080 141 0 0 chr17 79516141 79516665 -9987888 + (GAATG)n Satellite Satellite 1 524 0 906 144 0 0 chr17 79516691 79516871 -9987682 + (GAATG)n Satellite Satellite 1 180 0 887 117 6 0 chr17 79516897 79517059 -9987494 + (GAATG)n Satellite Satellite 2 164 0 651 182 0 0 chr17 79517109 79517279 -9987274 + (GAATG)n Satellite Satellite 2 171 0 822 162 0 0 chr17 79517291 79517470 -9987083 + (GAATG)n Satellite Satellite 1 179 0 1254 78 0 0 chr17 79517490 79517670 -9986883 + (GAATG)n Satellite Satellite 1 180 0 804 174 0 0 chr17 79517685 79518160 -9986393 + (GAATG)n Satellite Satellite 1 475 0 822 138 0 0 chr17 79518183 79518343 -9986210 + (GAATG)n Satellite Satellite 3 162 0 1098 98 0 2 chr17 79518375 79518604 -9985949 + (GAATG)n Satellite Satellite 1 408 0 723 126 0 53 chr17 79518630 79518820 -9985733 + (GAATG)n Satellite Satellite 1 180 0 927 126 0 0 chr17 79518852 79519073 -9985480 + (GAATG)n Satellite Satellite 1 221 0 990 139 2 8 chr17 79519084 79519970 -9984583 + (GAATG)n Satellite Satellite 1 880 0 960 135 0 4 chr17 79519981 79520305 -9984248 + (GAATG)n Satellite Satellite 1 499 0 1002 122 0 0 chr17 79520328 79520508 -9984045 + (GAATG)n Satellite Satellite 1 180 0 975 139 0 0 chr17 79520543 79520723 -9983830 + (GAATG)n Satellite Satellite 1 180 0 1044 137 0 0 chr17 79520739 79521048 -9983505 + (GAATG)n Satellite Satellite 1 309 0 1062 96 0 0 chr17 79521061 79521227 -9983326 + (GAATG)n Satellite Satellite 2 167 0 836 130 0 27 chr17 79521243 79521428 -9983125 + (GAATG)n Satellite Satellite 1 180 0 970 112 6 6 chr17 79521448 79521627 -9982926 + (GAATG)n Satellite Satellite 2 180 0 1098 102 0 0 chr17 79521639 79521815 -9982738 + (GAATG)n Satellite Satellite 4 179 0 1092 127 1 3 chr17 79521836 79522340 -9982213 + (GAATG)n Satellite Satellite 1 682 0 1092 101 0 0 chr17 79522358 79522536 -9982017 + (GAATG)n Satellite Satellite 3 180 0 1050 139 0 4 chr17 79522556 79522902 -9981651 + (GAATG)n Satellite Satellite 2 523 0 1188 84 0 0 chr17 79522913 79523092 -9981461 + (GAATG)n Satellite Satellite 2 180 0 853 119 0 27 chr17 79523133 79523318 -9981235 + (GAATG)n Satellite Satellite 1 180 0 600 180 0 0 chr17 79523341 79523502 -9981051 + (GAATG)n Satellite Satellite 2 162 0 1048 138 3 3 chr17 79523518 79523875 -9980678 + (GAATG)n Satellite Satellite 1 357 0 1173 120 0 0 chr17 79523918 79524362 -9980191 + (GAATG)n Satellite Satellite 1 444 0 1113 137 0 0 chr17 79524375 79524767 -9979786 + (GAATG)n Satellite Satellite 1 392 0 896 139 3 14 chr17 79524778 79525140 -9979413 + (GAATG)n Satellite Satellite 1 358 0 828 144 0 0 chr17 79525157 79525330 -9979223 + (GAATG)n Satellite Satellite 2 174 0 201 94 0 0 chr17 79525342 79525374 -9979179 + (GAATG)n Satellite Satellite 3 34 0 939 124 2 12 chr17 79525391 79525799 -9978754 + (GAATG)n Satellite Satellite 1 403 0 1032 118 0 0 chr17 79525825 79526424 -9978129 + (GAATG)n Satellite Satellite 1 599 0 957 155 2 2 chr17 79526444 79526923 -9977630 + (GAATG)n Satellite Satellite 1 659 0 904 123 6 6 chr17 79526944 79527123 -9977430 + (GAATG)n Satellite Satellite 2 180 0 1153 114 4 10 chr17 79527139 79527544 -9977009 + (GAATG)n Satellite Satellite 1 579 0 1153 67 6 6 chr17 79527544 79527722 -9976831 + (GAATG)n Satellite Satellite 2 179 0 889 130 6 6 chr17 79527873 79528050 -9976503 + (GAATG)n Satellite Satellite 4 180 0 1008 139 1 7 chr17 79528076 79528602 -9975951 + (GAATG)n Satellite Satellite 2 699 0 219 69 0 0 chr17 79528617 79528646 -9975907 + (GAATG)n Satellite Satellite 3 31 0 1059 131 6 3 chr17 79528692 79529050 -9975503 + (GAATG)n Satellite Satellite 1 359 0 1035 153 2 0 chr17 79529072 79529724 -9974829 + (GAATG)n Satellite Satellite 1 653 0 1091 89 6 0 chr17 79529745 79529924 -9974629 + (GAATG)n Satellite Satellite 1 180 0 658 186 3 3 chr17 79529937 79530267 -9974286 + (GAATG)n Satellite Satellite 1 330 0 1092 111 0 0 chr17 79530279 79530459 -9974094 + (GAATG)n Satellite Satellite 1 180 0 1104 102 0 0 chr17 79530472 79530679 -9973874 + (GAATG)n Satellite Satellite 1 207 0 765 156 0 0 chr17 79530699 79530917 -9973636 + (GAATG)n Satellite Satellite 1 218 0 753 172 0 0 chr17 79530934 79531114 -9973439 + (GAATG)n Satellite Satellite 1 180 0 855 133 0 0 chr17 79531134 79531299 -9973254 + (GAATG)n Satellite Satellite 1 165 0 1152 84 0 0 chr17 79531349 79531528 -9973025 + (GAATG)n Satellite Satellite 2 180 0 555 125 0 0 chr17 79531539 79531643 -9972910 + (GAATG)n Satellite Satellite 2 105 0 1071 116 0 21 chr17 79531664 79532033 -9972520 + (GAATG)n Satellite Satellite 2 536 0 884 120 0 27 chr17 79532045 79532228 -9972325 + (GAATG)n Satellite Satellite 2 179 0 545 189 0 27 chr17 79532244 79532429 -9972124 + (GAATG)n Satellite Satellite 1 180 0 1122 119 1 7 chr17 79532452 79532934 -9971619 + (GAATG)n Satellite Satellite 1 657 0 1122 100 0 0 chr17 79532934 79533114 -9971439 + (GAATG)n Satellite Satellite 1 180 0 1167 115 0 0 chr17 79533202 79533649 -9970904 + (GAATG)n Satellite Satellite 1 447 0 696 172 0 0 chr17 79533685 79533859 -9970694 + (GAATG)n Satellite Satellite 1 174 0 849 122 0 0 chr17 79533965 79534121 -9970432 + (CATTC)n Satellite Satellite 2 157 0 922 124 6 6 chr17 79534147 79534324 -9970229 + (CATTC)n Satellite Satellite 4 180 0 1098 100 0 0 chr17 79534354 79534534 -9970019 + (CATTC)n Satellite Satellite 1 180 0 1081 126 4 6 chr17 79534559 79535094 -9969459 + (CATTC)n Satellite Satellite 1 534 0 1113 106 0 0 chr17 79535139 79535319 -9969234 + (CATTC)n Satellite Satellite 1 180 0 834 133 3 40 chr17 79535330 79535743 -9968810 + (CATTC)n Satellite Satellite 1 397 0 860 125 0 27 chr17 79535765 79535949 -9968604 + (CATTC)n Satellite Satellite 2 180 0 1014 132 2 4 chr17 79535961 79536423 -9968130 + (CATTC)n Satellite Satellite 1 460 0 1251 101 4 0 chr17 79536434 79536719 -9967834 + (CATTC)n Satellite Satellite 1 286 0 937 117 6 6 chr17 79536734 79536913 -9967640 + (CATTC)n Satellite Satellite 2 180 0 816 128 0 0 chr17 79536924 79537080 -9967473 + (CATTC)n Satellite Satellite 2 157 0 1044 103 4 4 chr17 79537106 79537387 -9967166 + (CATTC)n Satellite Satellite 1 281 0 1146 138 0 1 chr17 79537401 79538623 -9965930 + (CATTC)n Satellite Satellite 1 1221 0 192 111 0 0 chr17 79538644 79538680 -9965873 + (CATTG)n Simple_repeat Simple_repeat 4 39 0 672 176 0 0 chr17 79538689 79538859 -9965694 + (CATTC)n Satellite Satellite 2 171 0 1085 96 6 0 chr17 79538909 79539087 -9965466 + (CATTC)n Satellite Satellite 2 180 0 1131 131 1 6 chr17 79539098 79539880 -9964673 + (CATTC)n Satellite Satellite 1 778 0 993 128 0 0 chr17 79539900 79540080 -9964473 + (CATTC)n Satellite Satellite 1 180 0 699 135 5 28 chr17 79540091 79540315 -9964238 + (CATTC)n Satellite Satellite 1 218 0 1041 134 0 0 chr17 79540341 79540755 -9963798 + (CATTC)n Satellite Satellite 1 414 0 850 106 0 53 chr17 79540782 79540970 -9963583 + (CATTC)n Satellite Satellite 3 180 0 1042 89 6 6 chr17 79540986 79541165 -9963388 + (CATTC)n Satellite Satellite 2 180 0 888 151 0 0 chr17 79541215 79541394 -9963159 + (CATTC)n Satellite Satellite 1 179 0 1101 106 0 0 chr17 79541415 79541595 -9962958 + (CATTC)n Satellite Satellite 1 180 0 993 118 0 0 chr17 79541617 79541795 -9962758 + (CATTC)n Satellite Satellite 3 180 0 582 198 0 0 chr17 79541806 79541973 -9962580 + (CATTC)n Satellite Satellite 2 168 0 962 134 2 0 chr17 79541991 79542409 -9962144 + (CATTC)n Satellite Satellite 1 419 0 765 172 0 0 chr17 79542424 79542604 -9961949 + (CATTC)n Satellite Satellite 1 180 0 1242 73 0 0 chr17 79542615 79542794 -9961759 + (CATTC)n Satellite Satellite 2 180 0 1083 128 1 10 chr17 79542811 79543629 -9960924 + (CATTC)n Satellite Satellite 1 810 0 835 122 6 6 chr17 79543644 79543808 -9960745 + (CATTC)n Satellite Satellite 2 165 0 963 167 0 8 chr17 79543833 79544185 -9960368 + (CATTC)n Satellite Satellite 1 350 0 1032 121 4 6 chr17 79544218 79544753 -9959800 + (CATTC)n Satellite Satellite 1 534 0 1044 115 4 4 chr17 79544777 79545352 -9959201 + (CATTC)n Satellite Satellite 1 575 0 1043 115 3 5 chr17 79545376 79545966 -9958587 + (CATTC)n Satellite Satellite 1 588 0 1010 108 5 5 chr17 79545990 79546410 -9958143 + (CATTC)n Satellite Satellite 1 420 0 957 128 0 0 chr17 79546440 79546620 -9957933 + (CATTC)n Satellite Satellite 1 180 0 1044 122 3 29 chr17 79546634 79547000 -9957553 + (CATTC)n Satellite Satellite 1 357 0 345 156 0 0 chr17 79547011 79547088 -9957465 + (CATTC)n Satellite Satellite 4 80 0 1043 107 6 0 chr17 79547114 79547292 -9957261 + (CATTC)n Satellite Satellite 2 180 0 1218 129 6 17 chr17 79547303 79548013 -9956540 + (CATTC)n Satellite Satellite 1 702 0 1152 127 3 3 chr17 79548024 79548378 -9956175 + (CATTC)n Satellite Satellite 1 355 0 1029 123 0 0 chr17 79548392 79548723 -9955830 + (CATTC)n Satellite Satellite 1 331 0 672 176 0 0 chr17 79548835 79549005 -9955548 + (GAATG)n Satellite Satellite 2 171 0 918 133 0 0 chr17 79549031 79549204 -9955349 + (GAATG)n Satellite Satellite 2 174 0 1065 106 0 0 chr17 79549215 79549395 -9955158 + (GAATG)n Satellite Satellite 1 180 0 1146 108 0 2 chr17 79549408 79549869 -9954684 + (GAATG)n Satellite Satellite 1 639 0 1003 106 6 6 chr17 79549886 79550065 -9954488 + (GAATG)n Satellite Satellite 1 179 0 917 120 0 27 chr17 79550086 79550270 -9954283 + (GAATG)n Satellite Satellite 1 179 0 915 151 0 0 chr17 79550291 79550555 -9953998 + (GAATG)n Satellite Satellite 1 264 0 933 128 5 9 chr17 79550575 79551228 -9953325 + (GAATG)n Satellite Satellite 4 816 0 850 125 6 6 chr17 79551240 79551408 -9953145 + (GAATG)n Satellite Satellite 2 169 0 855 129 0 0 chr17 79551433 79551588 -9952965 + (GAATG)n Satellite Satellite 2 156 0 906 139 0 6 chr17 79551602 79551883 -9952670 + (GAATG)n Satellite Satellite 1 456 0 969 149 0 12 chr17 79551904 79552537 -9952016 + (GAATG)n Satellite Satellite 5 799 0 1266 130 0 3 chr17 79552549 79553378 -9951175 + (GAATG)n Satellite Satellite 1 1004 0 1119 107 0 18 chr17 79553389 79553813 -9950740 + (GAATG)n Satellite Satellite 1 416 0 821 153 6 0 chr17 79553834 79554010 -9950543 + (GAATG)n Satellite Satellite 4 180 0 957 151 1 4 chr17 79554043 79554489 -9950064 + (GAATG)n Satellite Satellite 1 623 0 935 134 6 0 chr17 79554489 79554668 -9949885 + (GAATG)n Satellite Satellite 1 180 0 969 142 0 2 chr17 79554804 79555493 -9949060 + (GAATG)n Satellite Satellite 2 865 0 856 136 6 6 chr17 79555509 79555686 -9948867 + (GAATG)n Satellite Satellite 3 179 0 1068 111 0 0 chr17 79555713 79555893 -9948660 + (GAATG)n Satellite Satellite 1 180 0 1149 90 0 0 chr17 79555906 79556083 -9948470 + (GAATG)n Satellite Satellite 1 177 0 828 145 0 0 chr17 79556103 79556332 -9948221 + (GAATG)n Satellite Satellite 1 229 0 963 112 0 0 chr17 79556344 79556505 -9948048 + (GAATG)n Satellite Satellite 4 164 0 1101 138 1 1 chr17 79556523 79557202 -9947351 + (GAATG)n Satellite Satellite 1 679 0 1113 106 0 0 chr17 79557213 79557393 -9947160 + (GAATG)n Satellite Satellite 1 180 0 786 155 0 0 chr17 79557418 79557643 -9946910 + (GAATG)n Satellite Satellite 1 225 0 1020 111 0 0 chr17 79557668 79557848 -9946705 + (GAATG)n Satellite Satellite 1 180 0 276 30 0 0 chr17 79557869 79557902 -9946651 + (GAATG)n Satellite Satellite 2 34 0 751 175 3 3 chr17 79557922 79558266 -9946287 + (GAATG)n Satellite Satellite 1 344 0 942 140 0 0 chr17 79558283 79558462 -9946091 + (GAATG)n Satellite Satellite 2 180 0 1121 113 2 12 chr17 79558484 79558817 -9945736 + (GAATG)n Satellite Satellite 2 506 0 921 150 0 0 chr17 79558864 79559044 -9945509 + (GAATG)n Satellite Satellite 1 180 0 1002 119 0 15 chr17 79559059 79559322 -9945231 + (GAATG)n Satellite Satellite 1 259 0 844 134 6 6 chr17 79559339 79559511 -9945042 + (GAATG)n Satellite Satellite 2 173 0 1083 120 0 0 chr17 79559523 79559790 -9944763 + (GAATG)n Satellite Satellite 1 267 0 985 117 6 6 chr17 79559817 79559996 -9944557 + (GAATG)n Satellite Satellite 2 180 0 970 129 3 3 chr17 79560008 79560360 -9944193 + (GAATG)n Satellite Satellite 1 352 0 1089 124 3 2 chr17 79560392 79561398 -9943155 + (GAATG)n Satellite Satellite 2 1186 0 766 150 6 6 chr17 79561418 79561591 -9942962 + (GAATG)n Satellite Satellite 4 176 0 1044 119 2 19 chr17 79561602 79561968 -9942585 + (GAATG)n Satellite Satellite 1 537 0 957 128 0 0 chr17 79561982 79562162 -9942391 + (GAATG)n Satellite Satellite 1 180 0 267 122 0 0 chr17 79562177 79562226 -9942327 + (GAATG)n Satellite Satellite 2 50 0 1059 112 0 0 chr17 79562247 79562426 -9942127 + (GAATG)n Satellite Satellite 2 180 0 828 142 6 14 chr17 79562457 79562822 -9941731 + (GAATG)n Satellite Satellite 1 362 0 753 168 0 0 chr17 79562860 79563039 -9941514 + (GAATG)n Satellite Satellite 2 180 0 288 178 0 0 chr17 79563051 79563124 -9941429 + (GAATG)n Satellite Satellite 2 74 0 930 144 0 0 chr17 79563135 79563315 -9941238 + (GAATG)n Satellite Satellite 1 180 0 920 128 6 0 chr17 79563330 79563509 -9941044 + (GAATG)n Satellite Satellite 1 180 0 1074 100 0 0 chr17 79563529 79563709 -9940844 + (GAATG)n Satellite Satellite 1 180 0 456 160 0 0 chr17 79563722 79563822 -9940731 + (GAATG)n Satellite Satellite 3 102 0 1110 116 0 2 chr17 79563868 79564213 -9940340 + (GAATG)n Satellite Satellite 1 524 0 981 132 0 5 chr17 79564224 79564618 -9939935 + (GAATG)n Satellite Satellite 1 569 0 1081 118 3 15 chr17 79564634 79565038 -9939515 + (GAATG)n Satellite Satellite 1 399 0 1021 95 6 6 chr17 79565162 79565341 -9939212 + (GAATG)n Satellite Satellite 2 180 0 1177 73 6 6 chr17 79565387 79565566 -9938987 + (GAATG)n Satellite Satellite 2 180 0 984 117 0 21 chr17 79565582 79565952 -9938601 + (GAATG)n Satellite Satellite 2 538 0 1253 125 2 11 chr17 79565972 79566450 -9938103 + (GAATG)n Satellite Satellite 1 473 0 1051 114 3 3 chr17 79566466 79566869 -9937684 + (GAATG)n Satellite Satellite 1 403 0 737 142 7 0 chr17 79566881 79567036 -9937517 + (GAATG)n Satellite Satellite 4 159 0 1176 77 0 0 chr17 79567049 79567218 -9937335 + (GAATG)n Satellite Satellite 2 170 0 523 127 9 9 chr17 79567235 79567345 -9937208 + (GAATG)n Satellite Satellite 5 114 0 714 183 0 0 chr17 79567394 79567563 -9936990 + (GAATG)n Satellite Satellite 2 170 0 1059 128 0 2 chr17 79567589 79567949 -9936604 + (GAATG)n Satellite Satellite 1 540 0 1110 100 0 0 chr17 79567969 79568149 -9936404 + (GAATG)n Satellite Satellite 1 180 0 1163 117 9 4 chr17 79568167 79568519 -9936034 + (GAATG)n Satellite Satellite 2 533 0 922 129 5 9 chr17 79568530 79568784 -9935769 + (GAATG)n Satellite Satellite 1 431 0 848 111 0 53 chr17 79568795 79568985 -9935568 + (GAATG)n Satellite Satellite 1 180 0 1108 83 6 6 chr17 79569005 79569185 -9935368 + (GAATG)n Satellite Satellite 1 180 0 1078 110 6 10 chr17 79569231 79569567 -9934986 + (GAATG)n Satellite Satellite 2 511 0 1065 89 0 0 chr17 79569579 79569747 -9934806 + (GAATG)n Satellite Satellite 4 171 0 897 137 0 0 chr17 79569759 79569927 -9934626 + (GAATG)n Satellite Satellite 4 171 0 1002 128 0 0 chr17 79569941 79570205 -9934348 + (GAATG)n Satellite Satellite 1 264 0 1059 110 5 9 chr17 79570230 79570821 -9933732 + (GAATG)n Satellite Satellite 4 765 0 1153 73 6 6 chr17 79570839 79571018 -9933535 + (GAATG)n Satellite Satellite 2 180 0 1023 108 4 4 chr17 79571034 79571293 -9933260 + (GAATG)n Satellite Satellite 1 259 0 1110 139 0 0 chr17 79571400 79571638 -9932915 + (CATTC)n Satellite Satellite 1 238 0 1218 101 0 16 chr17 79571649 79572013 -9932540 + (CATTC)n Satellite Satellite 2 359 0 889 122 6 6 chr17 79572043 79572223 -9932330 + (CATTC)n Satellite Satellite 1 180 0 846 144 0 0 chr17 79572254 79572517 -9932036 + (CATTC)n Satellite Satellite 1 263 0 995 122 4 0 chr17 79572560 79572832 -9931721 + (CATTC)n Satellite Satellite 1 273 0 591 117 0 0 chr17 79572877 79572980 -9931573 + (CATTC)n Satellite Satellite 1 103 0 1308 130 2 4 chr17 79572993 79573526 -9931027 + (CATTC)n Satellite Satellite 1 531 0 1162 72 6 6 chr17 79573547 79573727 -9930826 + (CATTC)n Satellite Satellite 1 180 0 1170 98 3 24 chr17 79573753 79574117 -9930436 + (CATTC)n Satellite Satellite 2 357 0 219 36 0 0 chr17 79574143 79574171 -9930382 + (CATTC)n Satellite Satellite 2 29 0 885 165 0 6 chr17 79574187 79574714 -9929839 + (CATTC)n Satellite Satellite 1 524 0 1006 117 6 20 chr17 79574735 79575276 -9929277 + (CATTC)n Satellite Satellite 1 532 0 627 181 0 0 chr17 79575303 79575463 -9929090 + (CATTC)n Satellite Satellite 2 161 0 1068 111 0 0 chr17 79575483 79575706 -9928847 + (CATTC)n Satellite Satellite 1 223 0 735 146 0 0 chr17 79575768 79575926 -9928627 + (CATTC)n Satellite Satellite 2 159 0 1176 99 0 0 chr17 79575942 79576191 -9928362 + (CATTC)n Satellite Satellite 1 249 0 1059 117 0 0 chr17 79576207 79576387 -9928166 + (CATTC)n Satellite Satellite 1 180 0 957 133 3 6 chr17 79576404 79576757 -9927796 + (CATTC)n Satellite Satellite 3 353 0 1014 122 0 0 chr17 79576772 79576952 -9927601 + (CATTC)n Satellite Satellite 1 180 0 1032 98 0 0 chr17 79576977 79577141 -9927412 + (CATTC)n Satellite Satellite 1 164 0 658 137 0 53 chr17 79577157 79577347 -9927206 + (CATTC)n Satellite Satellite 1 180 0 1155 109 0 11 chr17 79577366 79577912 -9926641 + (CATTC)n Satellite Satellite 1 540 0 1051 84 6 6 chr17 79577943 79578122 -9926431 + (CATTC)n Satellite Satellite 2 180 0 855 143 0 0 chr17 79578143 79578407 -9926146 + (CATTC)n Satellite Satellite 1 264 0 1083 129 0 0 chr17 79578454 79578711 -9925842 + (CATTC)n Satellite Satellite 1 257 0 928 140 2 2 chr17 79578728 79579216 -9925337 + (CATTC)n Satellite Satellite 1 488 0 1131 149 0 2 chr17 79579247 79579752 -9924801 + (CATTC)n Satellite Satellite 1 504 0 1002 137 0 3 chr17 79579768 79580103 -9924450 + (CATTC)n Satellite Satellite 2 335 0 1005 121 0 0 chr17 79580249 79580423 -9924130 + (CATTC)n Satellite Satellite 2 175 0 1119 116 0 0 chr17 79580442 79580783 -9923770 + (CATTC)n Satellite Satellite 1 341 0 1077 141 3 3 chr17 79580809 79581163 -9923390 + (CATTC)n Satellite Satellite 2 355 0 1000 101 6 6 chr17 79581178 79581357 -9923196 + (CATTC)n Satellite Satellite 2 180 0 906 160 0 0 chr17 79581368 79581657 -9922896 + (CATTC)n Satellite Satellite 1 289 0 835 130 0 27 chr17 79581692 79581877 -9922676 + (CATTC)n Satellite Satellite 1 180 0 911 113 0 27 chr17 79581902 79582087 -9922466 + (CATTC)n Satellite Satellite 1 180 0 1161 129 0 0 chr17 79582107 79582522 -9922031 + (CATTC)n Satellite Satellite 1 415 0 1176 136 0 2 chr17 79582539 79583199 -9921354 + (CATTC)n Satellite Satellite 1 659 0 1059 117 0 0 chr17 79583212 79583392 -9921161 + (CATTC)n Satellite Satellite 1 180 0 1091 163 5 3 chr17 79583404 79584062 -9920491 + (CATTC)n Satellite Satellite 1 659 0 1044 148 0 0 chr17 79584075 79584615 -9919938 + (CATTC)n Satellite Satellite 1 540 0 1044 114 0 0 chr17 79584641 79584817 -9919736 + (CATTC)n Satellite Satellite 2 177 0 728 126 5 28 chr17 79584831 79585055 -9919498 + (CATTC)n Satellite Satellite 1 218 0 1059 117 0 0 chr17 79585102 79585325 -9919228 + (CATTC)n Satellite Satellite 1 223 0 1182 110 0 0 chr17 79585336 79585669 -9918884 + (CATTC)n Satellite Satellite 1 333 0 793 121 0 53 chr17 79585705 79585895 -9918658 + (CATTC)n Satellite Satellite 1 180 0 1204 119 3 6 chr17 79585906 79586250 -9918303 + (CATTC)n Satellite Satellite 2 344 0 1113 106 0 0 chr17 79586270 79586450 -9918103 + (CATTC)n Satellite Satellite 1 180 0 870 158 0 0 chr17 79586461 79586861 -9917692 + (CATTC)n Satellite Satellite 1 400 0 887 117 6 0 chr17 79586911 79587073 -9917480 + (CATTC)n Satellite Satellite 2 164 0 906 144 0 0 chr17 79587099 79587279 -9917274 + (CATTC)n Satellite Satellite 1 180 0 942 157 0 13 chr17 79587305 79587854 -9916699 + (CATTC)n Satellite Satellite 1 541 0 557 153 0 35 chr17 79587865 79588009 -9916544 + (CATTC)n Satellite Satellite 2 140 0 872 143 0 21 chr17 79588020 79588269 -9916284 + (CATTC)n Satellite Satellite 1 243 0 1146 100 0 0 chr17 79588284 79588464 -9916089 + (CATTC)n Satellite Satellite 1 180 0 1122 123 2 12 chr17 79588485 79589081 -9915472 + (CATTC)n Satellite Satellite 1 589 0 918 115 0 50 chr17 79589094 79589634 -9914919 + (CATTC)n Satellite Satellite 1 346 0 1107 102 0 0 chr17 79589664 79589841 -9914712 + (CATTC)n Satellite Satellite 1 177 0 893 109 0 19 chr17 79589852 79590131 -9914422 + (CATTC)n Satellite Satellite 1 273 0 512 195 0 27 chr17 79590154 79590339 -9914214 + (CATTC)n Satellite Satellite 1 180 0 915 132 0 0 chr17 79590355 79590529 -9914024 + (CATTC)n Satellite Satellite 2 175 0 876 125 0 0 chr17 79590564 79590724 -9913829 + (CATTC)n Satellite Satellite 1 160 0 753 172 0 0 chr17 79590744 79590924 -9913629 + (CATTC)n Satellite Satellite 1 180 0 597 184 0 0 chr17 79590941 79591099 -9913454 + (CATTC)n Satellite Satellite 3 160 0 1167 115 3 3 chr17 79591119 79592023 -9912530 + (CATTC)n Satellite Satellite 1 904 0 1041 113 0 0 chr17 79592042 79592219 -9912334 + (CATTC)n Satellite Satellite 4 180 0 864 167 0 10 chr17 79592230 79592734 -9911819 + (CATTC)n Satellite Satellite 1 498 0 1005 129 0 32 chr17 79592764 79593128 -9911425 + (CATTC)n Satellite Satellite 1 353 0 1086 130 2 13 chr17 79593140 79594293 -9910260 + (CATTC)n Satellite Satellite 1 1140 0 818 141 0 27 chr17 79594328 79594513 -9910040 + (CATTC)n Satellite Satellite 1 180 0 911 113 0 27 chr17 79594538 79594723 -9909830 + (CATTC)n Satellite Satellite 1 180 0 1044 133 0 0 chr17 79594741 79595143 -9909410 + (CATTC)n Satellite Satellite 1 402 0 1164 125 0 19 chr17 79595160 79595973 -9908580 + (CATTC)n Satellite Satellite 1 797 0 258 95 0 0 chr17 79595985 79596027 -9908526 + (CATTC)n Satellite Satellite 3 44 0 705 171 0 0 chr17 79596039 79596209 -9908344 + (CATTC)n Satellite Satellite 2 171 0 1081 96 9 0 chr17 79596259 79596496 -9908057 + (CATTC)n Satellite Satellite 1 239 0 297 83 24 0 chr17 79596513 79596606 -9907947 + (CATTC)n Satellite Satellite 1 95 0 1110 100 0 0 chr17 79596619 79596799 -9907754 + (CATTC)n Satellite Satellite 1 180 0 945 129 0 0 chr17 79596824 79597158 -9907395 + (CATTC)n Satellite Satellite 1 334 0 948 128 0 0 chr17 79597204 79597383 -9907170 + (CATTC)n Satellite Satellite 1 179 0 1240 61 6 6 chr17 79597409 79597589 -9906964 + (CATTC)n Satellite Satellite 1 180 0 577 145 7 7 chr17 79597600 79597738 -9906815 + (CATTC)n Satellite Satellite 2 139 0 1233 122 0 3 chr17 79597750 79598108 -9906445 + (CATTC)n Satellite Satellite 2 358 0 951 164 0 8 chr17 79598130 79598754 -9905799 + (CATTC)n Satellite Satellite 1 619 0 438 209 0 0 chr17 79598774 79598908 -9905645 + (CATTC)n Satellite Satellite 1 134 0 988 133 3 12 chr17 79598919 79599873 -9904680 + (CATTC)n Satellite Satellite 1 945 0 747 142 0 0 chr17 79599933 79600153 -9904400 + (CATTC)n Satellite Satellite 1 220 0 786 160 0 0 chr17 79600168 79600406 -9904147 + (CATTC)n Satellite Satellite 1 238 0 1113 142 0 14 chr17 79600424 79600777 -9903776 + (CATTC)n Satellite Satellite 1 348 0 762 120 14 14 chr17 79600788 79600999 -9903554 + (CATTC)n Satellite Satellite 1 211 0 984 148 0 2 chr17 79601022 79601387 -9903166 + (CATTC)n Satellite Satellite 1 364 0 1127 136 1 1 chr17 79601412 79602136 -9902417 + (CATTC)n Satellite Satellite 1 724 0 908 130 0 27 chr17 79602166 79602351 -9902202 + (CATTC)n Satellite Satellite 1 180 0 628 147 0 53 chr17 79602376 79602566 -9901987 + (CATTC)n Satellite Satellite 1 180 0 777 172 0 0 chr17 79602596 79602776 -9901777 + (CATTC)n Satellite Satellite 1 180 0 909 156 0 10 chr17 79602798 79603097 -9901456 + (CATTC)n Satellite Satellite 3 297 0 1101 128 0 14 chr17 79603117 79603846 -9900707 + (CATTC)n Satellite Satellite 1 718 0 764 98 5 77 chr17 79603871 79604065 -9900488 + (CATTC)n Satellite Satellite 1 180 0 777 146 0 15 chr17 79604081 79604356 -9900197 + (CATTC)n Satellite Satellite 1 270 0 664 168 6 6 chr17 79604378 79604557 -9899996 + (CATTC)n Satellite Satellite 1 179 0 1068 106 0 0 chr17 79604579 79604758 -9899795 + (CATTC)n Satellite Satellite 2 180 0 1035 125 2 11 chr17 79604769 79605218 -9899335 + (CATTC)n Satellite Satellite 1 444 0 711 126 0 53 chr17 79605237 79605427 -9899126 + (CATTC)n Satellite Satellite 1 180 0 975 151 0 13 chr17 79605448 79605744 -9898809 + (CATTC)n Satellite Satellite 2 293 0 1090 84 6 6 chr17 79605758 79605936 -9898617 + (CATTC)n Satellite Satellite 2 179 0 801 89 0 0 chr17 79605963 79606087 -9898466 + (CATTC)n Satellite Satellite 2 125 0 1162 72 6 6 chr17 79606107 79606287 -9898266 + (CATTC)n Satellite Satellite 1 180 0 1191 82 5 0 chr17 79606305 79606530 -9898023 + (CATTC)n Satellite Satellite 1 226 0 916 123 6 6 chr17 79606542 79606721 -9897832 + (CATTC)n Satellite Satellite 2 180 0 987 117 0 0 chr17 79606736 79606916 -9897637 + (CATTC)n Satellite Satellite 1 180 0 633 189 0 0 chr17 79606968 79607132 -9897421 + (CATTC)n Satellite Satellite 3 166 0 968 119 6 0 chr17 79607157 79607334 -9897219 + (CATTC)n Satellite Satellite 2 179 0 799 137 4 4 chr17 79607346 79607575 -9896978 + (CATTC)n Satellite Satellite 1 229 0 915 146 0 0 chr17 79607605 79607954 -9896599 + (CATTC)n Satellite Satellite 1 349 0 1134 109 0 0 chr17 79607968 79608235 -9896318 + (CATTC)n Satellite Satellite 1 267 0 831 161 0 0 chr17 79608336 79608516 -9896037 + (GAATG)n Satellite Satellite 1 180 0 810 138 0 0 chr17 79608539 79608699 -9895854 + (GAATG)n Satellite Satellite 3 162 0 1098 113 0 26 chr17 79608741 79609115 -9895438 + (GAATG)n Satellite Satellite 1 364 0 234 105 0 0 chr17 79609132 79609170 -9895383 + (GAATG)n Satellite Satellite 2 39 0 1017 130 1 4 chr17 79609193 79609814 -9894739 + (GAATG)n Satellite Satellite 2 798 0 744 173 0 0 chr17 79609830 79610009 -9894544 + (GAATG)n Satellite Satellite 2 180 0 892 144 3 3 chr17 79610025 79610324 -9894229 + (GAATG)n Satellite Satellite 1 299 0 1047 121 0 0 chr17 79610335 79610639 -9893914 + (GAATG)n Satellite Satellite 1 304 0 991 96 6 6 chr17 79610650 79610827 -9893726 + (GAATG)n Satellite Satellite 4 180 0 954 131 0 0 chr17 79610839 79611007 -9893546 + (GAATG)n Satellite Satellite 4 171 0 969 140 0 0 chr17 79611021 79611285 -9893268 + (GAATG)n Satellite Satellite 1 264 0 856 140 3 3 chr17 79611305 79611659 -9892894 + (GAATG)n Satellite Satellite 1 354 0 1118 113 6 6 chr17 79611671 79611959 -9892594 + (GAATG)n Satellite Satellite 1 468 0 1118 67 11 11 chr17 79611959 79612139 -9892414 + (GAATG)n Satellite Satellite 1 180 0 992 100 11 11 chr17 79612234 79612414 -9892139 + (GAATG)n Satellite Satellite 1 180 0 1041 143 0 6 chr17 79612454 79612813 -9891740 + (GAATG)n Satellite Satellite 1 534 0 915 132 0 0 chr17 79612829 79613003 -9891550 + (GAATG)n Satellite Satellite 2 175 0 1032 142 1 1 chr17 79613018 79613532 -9891021 + (GAATG)n Satellite Satellite 1 694 0 990 124 2 27 chr17 79613543 79613917 -9890636 + (GAATG)n Satellite Satellite 1 540 0 924 133 0 0 chr17 79613931 79614111 -9890442 + (GAATG)n Satellite Satellite 1 180 0 977 116 5 5 chr17 79614126 79614541 -9890012 + (GAATG)n Satellite Satellite 1 415 0 1200 96 2 6 chr17 79614565 79614917 -9889636 + (GAATG)n Satellite Satellite 2 527 0 996 118 0 0 chr17 79614935 79615152 -9889401 + (GAATG)n Satellite Satellite 1 217 0 1059 146 0 2 chr17 79615180 79615540 -9889013 + (GAATG)n Satellite Satellite 1 540 0 835 122 6 6 chr17 79615575 79615739 -9888814 + (GAATG)n Satellite Satellite 2 165 0 195 129 0 0 chr17 79615754 79615785 -9888768 + (GAATG)n Satellite Satellite 1 31 0 1083 137 2 7 chr17 79615803 79616584 -9887969 + (GAATG)n Satellite Satellite 1 956 0 760 142 6 6 chr17 79616603 79616772 -9887781 + (GAATG)n Satellite Satellite 2 170 0 648 123 0 77 chr17 79616783 79616978 -9887575 + (GAATG)n Satellite Satellite 1 180 0 981 152 0 0 chr17 79617008 79617737 -9886816 + (GAATG)n Satellite Satellite 1 729 0 615 192 0 0 chr17 79617755 79617922 -9886631 + (GAATG)n Satellite Satellite 2 168 0 1023 118 5 11 chr17 79617933 79618532 -9886021 + (GAATG)n Satellite Satellite 1 774 0 252 200 0 0 chr17 79618545 79618620 -9885933 + (GAATG)n Satellite Satellite 3 77 0 988 118 5 15 chr17 79618638 79619056 -9885497 + (GAATG)n Satellite Satellite 1 413 0 769 134 6 6 chr17 79619069 79619233 -9885320 + (GAATG)n Satellite Satellite 4 167 0 249 33 0 0 chr17 79619259 79619289 -9885264 + (GAATG)n Satellite Satellite 3 32 0 1149 128 1 2 chr17 79619321 79620155 -9884398 + (GAATG)n Satellite Satellite 1 1012 0 975 171 0 0 chr17 79620171 79620665 -9883888 + (GAATG)n Satellite Satellite 1 494 0 1183 100 3 3 chr17 79620706 79621005 -9883548 + (GAATG)n Satellite Satellite 1 299 0 1005 144 0 8 chr17 79621031 79621580 -9882973 + (GAATG)n Satellite Satellite 1 723 0 844 122 5 5 chr17 79621591 79621803 -9882750 + (GAATG)n Satellite Satellite 1 212 0 1153 73 6 6 chr17 79621821 79622000 -9882553 + (GAATG)n Satellite Satellite 2 180 0 806 85 0 8 chr17 79622016 79622146 -9882407 + (GAATG)n Satellite Satellite 2 130 0 1363 34 6 6 chr17 79622173 79622351 -9882202 + (GAATG)n Satellite Satellite 2 179 0 960 160 0 0 chr17 79622371 79622727 -9881826 + (GAATG)n Satellite Satellite 1 356 0 754 144 5 5 chr17 79622750 79622961 -9881592 + (GAATG)n Satellite Satellite 1 211 0 1077 136 1 2 chr17 79622976 79623634 -9880919 + (GAATG)n Satellite Satellite 2 831 0 809 110 8 25 chr17 79623656 79623899 -9880654 + (GAATG)n Satellite Satellite 1 238 0 809 161 3 11 chr17 79623910 79624272 -9880281 + (GAATG)n Satellite Satellite 1 359 0 1077 120 0 0 chr17 79624283 79624567 -9879986 + (GAATG)n Satellite Satellite 1 284 0 963 134 0 0 chr17 79624578 79624757 -9879796 + (GAATG)n Satellite Satellite 2 180 0 1110 108 0 0 chr17 79624778 79625007 -9879546 + (GAATG)n Satellite Satellite 1 229 0 909 153 0 6 chr17 79625027 79625382 -9879171 + (GAATG)n Satellite Satellite 2 530 0 949 117 6 6 chr17 79625393 79625572 -9878981 + (GAATG)n Satellite Satellite 2 180 0 1083 140 2 2 chr17 79625584 79626078 -9878475 + (GAATG)n Satellite Satellite 1 494 0 1029 99 0 0 chr17 79626091 79626310 -9878243 + (GAATG)n Satellite Satellite 1 219 0 961 112 6 6 chr17 79626328 79626506 -9878047 + (GAATG)n Satellite Satellite 3 180 0 537 147 0 0 chr17 79626522 79626631 -9877922 + (GAATG)n Satellite Satellite 2 110 0 910 117 6 6 chr17 79626657 79626837 -9877716 + (GAATG)n Satellite Satellite 1 180 0 1077 133 0 1 chr17 79626872 79627407 -9877146 + (GAATG)n Satellite Satellite 1 714 0 799 164 0 17 chr17 79627427 79627720 -9876833 + (GAATG)n Satellite Satellite 1 287 0 1259 67 6 0 chr17 79627731 79627910 -9876643 + (GAATG)n Satellite Satellite 1 180 0 855 135 0 0 chr17 79627926 79628139 -9876414 + (GAATG)n Satellite Satellite 1 213 0 1123 84 6 6 chr17 79628165 79628344 -9876209 + (GAATG)n Satellite Satellite 2 180 0 704 148 7 0 chr17 79628356 79628511 -9876042 + (GAATG)n Satellite Satellite 4 159 0 1278 73 0 0 chr17 79628524 79628703 -9875850 + (GAATG)n Satellite Satellite 2 180 0 857 132 0 28 chr17 79628720 79628902 -9875651 + (GAATG)n Satellite Satellite 3 179 0 1059 117 0 0 chr17 79628944 79629124 -9875429 + (GAATG)n Satellite Satellite 1 180 0 939 112 0 0 chr17 79629138 79629299 -9875254 + (GAATG)n Satellite Satellite 1 161 0 1110 100 0 0 chr17 79629319 79629499 -9875054 + (GAATG)n Satellite Satellite 1 180 0 1012 129 8 15 chr17 79629534 79630075 -9874478 + (GAATG)n Satellite Satellite 1 719 0 1035 135 1 8 chr17 79630098 79630820 -9873733 + (GAATG)n Satellite Satellite 1 716 0 987 117 0 0 chr17 79630845 79631025 -9873528 + (GAATG)n Satellite Satellite 1 180 0 230 277 109 36 chr17 79731158 79731295 -9773258 + MER20B DNA MER1_type 23 169 -614 26 30 0 0 chr17 79732593 79732626 -9771927 + GC_rich Low_complexity Low_complexity 1 33 0 317 266 166 50 chr17 79732767 79732868 -9771685 + MIR SINE MIR 41 129 -133 194 0 0 37 chr17 79732868 79732895 -9771658 + (ATG)n Simple_repeat Simple_repeat 2 27 0 317 266 166 50 chr17 79732895 79732992 -9771561 + MIR SINE MIR 129 262 0 258 326 65 0 chr17 79733259 79733351 -9771202 - L2 LINE L2 -1 3312 3215 642 221 0 0 chr17 79733672 79733844 -9770709 + (CCA)n Simple_repeat Simple_repeat 1 172 0 306 315 0 18 chr17 79733849 79733960 -9770593 + (CACCAT)n Simple_repeat Simple_repeat 2 110 0 2067 140 68 8 chr17 79734587 79734972 -9769581 - L1MB5 LINE L1 0 6174 5767 436 261 171 10 chr17 79735084 79735347 -9769206 + MLT1J2 LTR MaLR 14 326 -124 1170 158 27 41 chr17 79735431 79735652 -9768901 + MER20 DNA MER1_type 1 218 -1 270 90 0 75 chr17 79736368 79736435 -9768118 + (CACCAT)n Simple_repeat Simple_repeat 1 62 0 429 333 26 21 chr17 79736779 79736968 -9767585 + MIR SINE MIR 67 256 -6 399 132 0 0 chr17 79737000 79737068 -9767485 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 1560 255 77 21 chr17 79737116 79737177 -9767376 - MLT1G1 LTR MaLR -1 554 498 2262 117 120 5 chr17 79737177 79737561 -9766992 + MSTA LTR MaLR 1 428 0 1560 255 77 21 chr17 79737561 79738050 -9766503 - MLT1G1 LTR MaLR -57 498 7 228 73 49 0 chr17 79739376 79739417 -9765136 - L1PA8 LINE L1 0 6172 6130 * 4231 99 0 8 chr17 79739408 79740067 -9764486 + L1P LINE L1 4744 5397 -749 2104 146 10 0 chr17 79740506 79740815 -9763738 + AluSx SINE Alu 1 312 0 22 65 0 0 chr17 79741511 79741542 -9763011 + AT_rich Low_complexity Low_complexity 1 31 0 180 259 0 0 chr17 79741699 79741780 -9762773 + (CA)n Simple_repeat Simple_repeat 1 81 0 503 268 21 0 chr17 79741795 79742087 -9762466 + (CA)n Simple_repeat Simple_repeat 1 298 0 283 235 0 12 chr17 79742110 79742191 -9762362 + (CA)n Simple_repeat Simple_repeat 2 81 0 303 85 0 0 chr17 79742224 79742271 -9762282 + (CA)n Simple_repeat Simple_repeat 2 48 0 434 160 76 69 chr17 79742936 79743067 -9761486 + FLAM_C SINE Alu 2 133 0 250 188 31 47 chr17 79743067 79743131 -9761422 + GA-rich Low_complexity Low_complexity 3 65 0 514 256 23 0 chr17 79744082 79744211 -9760342 + MIR SINE MIR 124 255 -7 261 224 0 17 chr17 79744248 79744306 -9760247 - MIR SINE MIR -108 100 44 207 337 31 0 chr17 79744643 79744741 -9759812 + MIR SINE MIR 30 130 -78 363 44 0 0 chr17 79744916 79744961 -9759592 + (CAGCC)n Simple_repeat Simple_repeat 5 49 0 348 281 22 0 chr17 79746434 79746523 -9758030 + GA-rich Low_complexity Low_complexity 3 93 0 429 141 0 0 chr17 79746524 79746595 -9757958 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 276 100 0 0 chr17 79746587 79746627 -9757926 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 * 374 311 34 34 chr17 79746679 79746856 -9757697 + MARNA DNA Mariner 24 200 -386 244 290 32 32 chr17 79747010 79747134 -9757419 + MARNA DNA Mariner 325 448 -138 567 255 31 31 chr17 79747995 79748187 -9756366 - MLT1G LTR MaLR -328 262 71 756 199 16 11 chr17 79748346 79748532 -9756021 + MER53 DNA DNA 3 189 0 2389 204 54 14 chr17 79748677 79749232 -9755321 - MLT1G LTR MaLR -4 586 10 386 279 13 26 chr17 79750628 79750782 -9753771 - L1MC5 LINE L1 -36 7925 7774 2687 238 50 30 chr17 79750801 79750907 -9753646 - L1ME2 LINE L1 -10 6154 6052 2223 186 24 7 chr17 79750907 79751326 -9753227 + MSTB LTR MaLR 1 426 0 8284 167 46 16 chr17 79751327 79752928 -9751625 + MSTB-int LTR MaLR 2 1651 0 2340 171 19 7 chr17 79752928 79753349 -9751204 + MSTB LTR MaLR 1 426 0 2687 238 50 30 chr17 79753349 79754866 -9749687 - L1ME2 LINE L1 -111 6053 4498 311 261 0 0 chr17 79754926 79754995 -9749558 - L1ME2 LINE L1 -1662 4484 4416 2209 141 0 0 chr17 79755002 79755307 -9749246 + AluSx SINE Alu 1 305 -7 488 247 45 103 chr17 79755603 79755894 -9748659 + L1ME4a LINE L1 5848 6121 0 825 210 0 18 chr17 79755928 79756095 -9748458 - AluJo SINE Alu -30 282 119 273 57 0 0 chr17 79756095 79756130 -9748423 + (TTA)n Simple_repeat Simple_repeat 2 36 0 25 51 0 0 chr17 79757240 79757279 -9747274 + AT_rich Low_complexity Low_complexity 1 39 0 209 274 10 97 chr17 79757306 79757519 -9747034 - L2 LINE L2 -10 3262 3022 296 276 23 0 chr17 79758268 79758355 -9746198 + MIR SINE MIR 25 113 -149 223 160 40 20 chr17 79758412 79758462 -9746091 - MIR SINE MIR -102 160 110 205 209 0 23 chr17 79758511 79758554 -9745999 - MIR SINE MIR -148 114 73 323 292 73 0 chr17 79758570 79758666 -9745887 + MIR SINE MIR 160 262 0 265 362 99 0 chr17 79759070 79759222 -9745331 - MIR SINE MIR -48 214 48 1611 191 50 30 chr17 79759489 79759891 -9744662 + MLT2D LTR ERVL 1 410 -4 1002 115 0 0 chr17 79760205 79760335 -9744218 - AluSp SINE Alu -183 130 1 216 216 0 0 chr17 79761425 79761476 -9743077 + GA-rich Low_complexity Low_complexity 2 52 0 393 297 146 14 chr17 79761545 79761757 -9742796 + MIR SINE MIR 20 259 -3 426 330 109 9 chr17 79762441 79762671 -9741882 - MIR SINE MIR -2 260 8 2035 121 0 29 chr17 79764675 79764981 -9739572 - AluJo SINE Alu -15 297 1 271 238 125 0 chr17 79765465 79765545 -9739008 - MIR SINE MIR -71 191 102 185 260 123 0 chr17 79765938 79766011 -9738542 + MER5B DNA MER1_type 1 82 -96 211 333 9 18 chr17 79766036 79766150 -9738403 - MIR3 SINE MIR -53 155 43 1176 128 5 25 chr17 79766836 79767039 -9737514 - MER39 LTR ERV1 -250 457 259 834 131 75 80 chr17 79767015 79767214 -9737339 - MER21A LTR ERV1 -733 198 1 * 193 317 241 7 chr17 79767562 79767707 -9736846 + MIR SINE MIR 20 198 -64 484 258 116 30 chr17 79768219 79768352 -9736201 - L2 LINE L2 0 3313 3156 279 0 0 0 chr17 79768352 79768383 -9736170 + (CA)n Simple_repeat Simple_repeat 2 32 0 484 258 116 30 chr17 79768383 79768447 -9736106 - L2 LINE L2 -157 3156 3099 915 150 39 13 chr17 79768458 79768611 -9735942 - FRAM SINE Alu 0 40 1 289 275 70 92 chr17 79768655 79768928 -9735625 + MLT1H LTR MaLR 1 267 -282 1700 216 142 2 chr17 79769035 79769466 -9735087 - MLT1E2 LTR MaLR 0 626 136 2224 110 7 0 chr17 79769469 79769779 -9734774 - THE1B LTR MaLR 0 364 53 288 281 0 31 chr17 79773374 79773470 -9731083 + MER5B DNA MER1_type 51 143 -35 2490 91 0 3 chr17 79773473 79773780 -9730773 + AluSp SINE Alu 4 309 -4 534 286 0 0 chr17 79774170 79774303 -9730250 + MER5A DNA MER1_type 57 189 0 475 214 89 35 chr17 79774320 79774422 -9730131 + MER5A DNA MER1_type 5 123 -66 1813 147 7 7 chr17 79774422 79774721 -9729832 - AluSg SINE Alu 0 307 9 475 214 89 35 chr17 79774721 79774792 -9729761 + MER5A DNA MER1_type 123 189 0 387 326 16 16 chr17 79776943 79777072 -9727481 + MIR SINE MIR 16 144 -64 302 152 48 124 chr17 79777073 79777133 -9727420 - LTR33 LTR ERVL -15 506 456 590 264 29 6 chr17 79777133 79777307 -9727246 - MER45A DNA AcHobo 0 178 1 302 152 48 124 chr17 79777307 79777351 -9727202 - LTR33 LTR ERVL -65 456 410 274 215 38 0 chr17 79777487 79777566 -9726987 - LTR33 LTR ERVL -414 107 26 750 323 75 30 chr17 79778579 79778981 -9725572 - LTR16C LTR ERVL -7 484 65 2120 217 138 35 chr17 79779268 79779399 -9725154 + L2 LINE L2 2197 2313 -1001 2077 205 57 57 chr17 79779399 79779898 -9724655 - MLT1F LTR MaLR 0 542 41 1800 180 3 20 chr17 79779898 79780203 -9724350 + AluJb SINE Alu 1 300 -12 2077 205 57 57 chr17 79780203 79780245 -9724308 - MLT1F LTR MaLR -500 42 1 2120 217 138 35 chr17 79780245 79780817 -9723736 + L2 LINE L2 2313 2972 -342 1206 60 0 0 chr17 79780817 79780967 -9723586 - AluY SINE Alu -158 153 4 1368 39 0 0 chr17 79780968 79781124 -9723429 + AluY SINE Alu 156 311 0 891 249 105 6 chr17 79781146 79781459 -9723094 + L2 LINE L2 2962 3305 -8 1477 284 81 4 chr17 79781487 79781984 -9722569 - MLT1G1 LTR MaLR 0 595 61 2357 104 7 3 chr17 79782406 79782715 -9721838 - AluSx SINE Alu -1 311 2 887 206 22 40 chr17 79782719 79782942 -9721611 - MER20 DNA MER1_type 0 219 1 1023 172 183 42 chr17 79783603 79783865 -9720688 - AluJo SINE Alu -3 299 1 829 226 106 18 chr17 79783893 79784110 -9720443 + MLT1G1 LTR MaLR 360 595 0 612 313 118 40 chr17 79784426 79785197 -9719356 + L2 LINE L2 2121 2951 -363 978 163 59 0 chr17 79785246 79785399 -9719154 - AluJb SINE Alu -17 295 134 1988 113 0 0 chr17 79785410 79785667 -9718886 - AluSx SINE Alu -14 298 42 368 265 54 38 chr17 79785735 79785920 -9718633 + L2 LINE L2 3120 3307 -6 2051 133 0 26 chr17 79785926 79786234 -9718319 + AluJo SINE Alu 13 312 0 450 0 0 0 chr17 79786454 79786504 -9718049 + (TG)n Simple_repeat Simple_repeat 2 51 0 255 31 0 0 chr17 79787299 79787331 -9717222 + (CA)n Simple_repeat Simple_repeat 2 33 0 252 0 0 0 chr17 79787357 79787385 -9717168 + (CA)n Simple_repeat Simple_repeat 2 29 0 2483 82 3 0 chr17 79787462 79787766 -9716787 + AluSq SINE Alu 1 305 -8 243 250 18 0 chr17 79788227 79788283 -9716270 + GA-rich Low_complexity Low_complexity 2 58 0 216 0 0 0 chr17 79788318 79788342 -9716211 + (ATG)n Simple_repeat Simple_repeat 3 26 0 726 319 18 0 chr17 79788365 79788591 -9715962 - MIR SINE MIR -24 238 9 343 296 21 5 chr17 79788980 79789180 -9715373 + (GGATG)n Simple_repeat Simple_repeat 1 203 0 2480 77 3 0 chr17 79789188 79789488 -9715065 - AluSq SINE Alu -12 301 1 271 303 30 91 chr17 79789947 79790113 -9714440 - MIR SINE MIR -61 147 35 459 274 14 14 chr17 79790137 79790283 -9714270 - LTR16C LTR ERVL 0 491 346 340 314 59 13 chr17 79790343 79790496 -9714057 - LTR16C LTR ERVL -249 242 83 231 300 29 0 chr17 79791343 79791413 -9713140 + (CATG)n Simple_repeat Simple_repeat 1 72 0 184 379 9 9 chr17 79791413 79791529 -9713024 + MIR SINE MIR 22 137 -71 190 343 0 0 chr17 79792372 79792449 -9712104 - MIR SINE MIR -72 136 75 225 317 8 25 chr17 79792893 79793013 -9711540 + CT-rich Low_complexity Low_complexity 2 119 0 274 193 241 0 chr17 79793329 79793412 -9711141 - L2 LINE L2 0 3313 3211 227 260 0 0 chr17 79793413 79793463 -9711090 + MIR SINE MIR 213 262 0 482 224 186 19 chr17 79793800 79793961 -9710592 + MER5A DNA MER1_type 1 188 -1 347 291 9 0 chr17 79793961 79794071 -9710482 - L2 LINE L2 -246 3026 2916 1773 142 12 76 chr17 79794182 79794305 -9710248 + MER1B DNA MER1_type 31 160 -2552 2398 108 0 9 chr17 79794305 79794620 -9709933 + AluSx SINE Alu 1 312 0 1773 142 12 76 chr17 79794620 79794826 -9709727 + MER1B DNA MER1_type 160 339 0 329 194 30 0 chr17 79795236 79795303 -9709250 - L2 LINE L2 -1 3271 3203 1536 255 155 29 chr17 79795665 79796134 -9708419 - L2 LINE L2 -467 2847 2439 996 281 50 39 chr17 79796134 79796593 -9707960 - LTR16B LTR ERVL 0 464 1 1536 255 155 29 chr17 79796593 79796889 -9707664 - L2 LINE L2 -875 2439 1985 290 311 91 11 chr17 79797009 79797226 -9707327 + LTR16A LTR ERVL 16 305 -145 624 283 16 65 chr17 79797392 79797639 -9706914 + L2 LINE L2 3075 3309 -4 572 240 20 7 chr17 79798934 79799084 -9705469 - MIR SINE MIR -98 164 13 366 229 55 122 chr17 79799236 79799367 -9705186 + MLT1C LTR MaLR 1 92 -298 2041 120 13 3 chr17 79799367 79799666 -9704887 + AluJb SINE Alu 1 302 -10 366 229 55 122 chr17 79799666 79799788 -9704765 + MLT1C LTR MaLR 92 221 -169 269 154 39 0 chr17 79799789 79799841 -9704712 + MIR SINE MIR 111 164 -98 849 238 43 23 chr17 79799949 79800205 -9704348 + MLT1C LTR MaLR 207 467 0 368 294 71 35 chr17 79801567 79801764 -9702789 + MIR SINE MIR 2 205 -57 1899 118 70 25 chr17 79801831 79802188 -9702365 - THE1C LTR MaLR -2 373 1 566 174 42 42 chr17 79802722 79802866 -9701687 + MER96B DNA MER1_type? 261 404 -13 291 259 20 42 chr17 79803170 79803305 -9701248 - MIR SINE MIR -62 146 48 1142 245 64 36 chr17 79803683 79804075 -9700478 - MER39 LTR ERV1 0 707 305 448 88 63 31 chr17 79804179 79804338 -9700215 + G-rich Low_complexity Low_complexity 2 165 0 1004 225 10 60 chr17 79804436 79804738 -9699815 + MLT1B LTR MaLR 99 385 -5 1273 271 56 23 chr17 79804751 79805320 -9699233 - L1ME LINE L1 -4738 1646 1059 634 216 182 0 chr17 79805329 79805505 -9699048 - MER3 DNA MER1_type 0 209 2 569 274 85 112 chr17 79805507 79806106 -9698447 - L1ME LINE L1 -5205 1167 597 2386 89 3 10 chr17 79806106 79806410 -9698143 - AluSx SINE Alu -10 302 1 569 274 85 112 chr17 79806410 79806688 -9697865 - L1ME LINE L1 -5775 597 313 499 311 31 5 chr17 79807206 79807399 -9697154 + MIR SINE MIR 50 247 -15 482 238 169 6 chr17 79808449 79808621 -9695932 - L2 LINE L2 0 3313 3114 867 177 73 6 chr17 79808633 79808797 -9695756 + FRAM SINE Alu 1 174 -2 471 323 100 17 chr17 79808798 79809089 -9695464 - L2 LINE L2 -195 3118 2804 305 324 51 42 chr17 79809120 79809336 -9695217 + L2 LINE L2 2617 2834 -480 234 311 0 14 chr17 79809798 79809872 -9694681 - MIR SINE MIR -171 91 19 498 235 114 0 chr17 79810053 79810202 -9694351 + MIR SINE MIR 92 257 -5 2209 106 10 0 chr17 79811218 79811511 -9693042 - AluSx SINE Alu -16 296 1 255 173 0 0 chr17 79812940 79812992 -9691561 + G-rich Low_complexity Low_complexity 5 56 0 340 250 38 0 chr17 79813677 79813757 -9690796 + L3 LINE CR1 1483 1565 -12 578 250 138 52 chr17 79813925 79814309 -9690244 + MER96B DNA MER1_type 1 417 0 361 279 87 23 chr17 79814412 79814584 -9689969 + LTR16C LTR ERVL 1 183 -308 268 200 29 0 chr17 79814717 79814787 -9689766 + LTR16C LTR ERVL 367 438 -53 4074 76 86 37 chr17 79815071 79815462 -9689091 + PABL_A LTR ERV1 1 371 -289 2248 116 19 13 chr17 79815462 79815773 -9688780 - AluSq SINE Alu 0 313 1 2391 69 26 10 chr17 79815783 79816089 -9688464 - AluY SINE Alu 0 311 1 4074 76 86 37 chr17 79816089 79816315 -9688238 + PABL_A LTR ERV1 379 660 0 554 235 111 13 chr17 79816777 79816930 -9687623 + MIR3 SINE MIR 30 197 -11 348 273 50 20 chr17 79817973 79818072 -9686481 - MIR3 SINE MIR -23 185 84 3788 89 13 6 chr17 79818486 79819036 -9685517 + MER41A LTR ERV1 1 554 0 1054 276 33 58 chr17 79819229 79819748 -9684805 - MLT1J LTR MaLR -2 509 4 197 125 0 50 chr17 79819788 79819828 -9684725 + MIR SINE MIR 113 150 -112 1434 117 9 14 chr17 79820664 79820887 -9683666 + AluSg/x SINE Alu 84 305 -7 324 339 24 0 chr17 79821154 79821278 -9683275 - L2 LINE L2 -228 3044 2918 2122 156 0 0 chr17 79821730 79822038 -9682515 - AluSx SINE Alu -4 308 1 1075 105 0 0 chr17 79822041 79822174 -9682379 - AluSq/x SINE Alu -179 133 1 2243 122 3 0 chr17 79824836 79825140 -9679413 + AluSq SINE Alu 1 305 -8 295 286 0 19 chr17 79825183 79825288 -9679265 + C-rich Low_complexity Low_complexity 3 105 0 417 153 0 0 chr17 79826476 79826548 -9678005 + (TAA)n Simple_repeat Simple_repeat 3 74 0 228 232 18 0 chr17 79826577 79826633 -9677920 - MIR SINE MIR -65 197 141 1646 120 0 52 chr17 79826634 79826884 -9677669 - AluJb SINE Alu -12 300 64 400 208 14 4 chr17 79826939 79827023 -9677530 - AluS SINE Alu -240 60 1 263 179 12 3 chr17 79827024 79827087 -9677466 - MIR SINE MIR -81 127 61 201 316 82 10 chr17 79828198 79828296 -9676257 - MIR SINE MIR -41 221 117 182 315 0 0 chr17 79828828 79828882 -9675671 - L3b LINE CR1 -193 1390 1337 193 200 0 0 chr17 79829191 79829226 -9675327 - MER5A DNA MER1_type -2 187 153 740 235 44 16 chr17 79829240 79829423 -9675130 + MLT1B LTR MaLR 1 188 -186 811 193 3 3 chr17 79829423 79829652 -9674901 + CT-rich Low_complexity Low_complexity 1 229 -424 1987 101 3 98 chr17 79829652 79829980 -9674573 - AluSx SINE Alu -15 297 1 811 193 3 3 chr17 79829980 79830076 -9674477 + CT-rich Low_complexity Low_complexity 228 653 0 754 245 16 0 chr17 79830094 79830278 -9674275 + MLT1B LTR MaLR 204 390 0 260 212 10 111 chr17 79830278 79830377 -9674176 - MER5A DNA MER1_type -93 96 8 1342 254 87 44 chr17 79831196 79831221 -9673332 - MLT1F1 LTR MaLR 0 567 545 2268 185 19 2 chr17 79831221 79831638 -9672915 + MSTB LTR MaLR 3 426 0 1342 254 87 44 chr17 79831638 79832153 -9672400 - MLT1F1 LTR MaLR -22 545 1 257 245 19 0 chr17 79832843 79832896 -9671657 - MER45 DNA AcHobo -3 1578 1525 * 331 182 0 15 chr17 79832886 79832952 -9671601 - MER45 DNA AcHobo -975 65 1 605 261 25 83 chr17 79833345 79833621 -9670932 - MIR SINE MIR -1 261 2 360 0 0 0 chr17 79833824 79833864 -9670689 + (TGGA)n Simple_repeat Simple_repeat 3 42 0 474 230 11 0 chr17 79835240 79835327 -9669226 + MLT1E LTR MaLR 364 451 -142 291 304 11 11 chr17 79836497 79836589 -9667964 - MIR SINE MIR -101 161 70 1720 150 97 8 chr17 79836639 79837012 -9667541 - LTR37A LTR ERV1 0 426 21 665 288 83 4 chr17 79837179 79837408 -9667145 - MIR SINE MIR -15 247 1 191 231 0 0 chr17 79837675 79837714 -9666839 - MIR SINE MIR -174 88 50 352 325 32 0 chr17 79837739 79837865 -9666688 + MIR SINE MIR 115 244 -18 370 242 47 87 chr17 79837867 79838016 -9666537 - MIR SINE MIR -94 168 26 2286 163 49 0 chr17 79838669 79839075 -9665478 + MSTB LTR MaLR 1 426 0 211 294 185 11 chr17 79839184 79839311 -9665242 - MIR3 SINE MIR -88 120 3 2085 134 0 0 chr17 79839676 79839854 -9664699 - AluSx SINE Alu 0 308 128 456 19 0 0 chr17 79839854 79839907 -9664646 + (TA)n Simple_repeat Simple_repeat 1 53 0 2085 134 0 0 chr17 79839907 79840036 -9664517 - AluSx SINE Alu -179 129 1 304 301 0 0 chr17 79840221 79840304 -9664249 + MER103 DNA DNA 1 83 -83 344 194 30 0 chr17 79840387 79840454 -9664099 - MIR SINE MIR -108 154 86 311 314 69 13 chr17 79841833 79841992 -9662561 - MIR SINE MIR 0 262 95 1981 211 107 30 chr17 79841992 79842533 -9662020 - MLT1E LTR MaLR 0 593 11 658 163 6 90 chr17 79844750 79844799 -9659754 - L1MB8 LINE L1 -21 6157 6105 2300 102 3 7 chr17 79844799 79845104 -9659449 + AluSx SINE Alu 3 306 -6 658 163 6 90 chr17 79845104 79845220 -9659333 - L1MB8 LINE L1 -73 6105 6006 937 234 79 38 chr17 79845220 79845562 -9658991 - MLT1C LTR MaLR 0 467 112 347 253 19 65 chr17 79845666 79845820 -9658733 - MLT1C LTR MaLR -320 147 1 1458 166 73 10 chr17 79845841 79846130 -9658423 - L1MB8 LINE L1 -187 5991 5685 2343 46 7 11 chr17 79846141 79846424 -9658129 - AluY SINE Alu -11 300 19 2337 117 0 0 chr17 79848460 79848767 -9655786 + AluSc SINE Alu 1 307 -2 2245 106 10 0 chr17 79849408 79849701 -9654852 - AluSx SINE Alu -12 300 5 356 261 42 17 chr17 79850010 79850129 -9654424 + L1ME4a LINE L1 5483 5604 -517 337 299 31 0 chr17 79850591 79850718 -9653835 + L1ME4a LINE L1 5987 6117 -4 2401 108 7 0 chr17 79850901 79851207 -9653346 + AluSx SINE Alu 2 309 -3 333 319 40 49 chr17 79851227 79851453 -9653100 + MLT1L LTR MaLR 387 610 -5 338 241 81 0 chr17 79851825 79851912 -9652641 - MER5A DNA MER1_type -80 109 16 207 0 0 0 chr17 79851921 79851944 -9652609 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1722 157 16 50 chr17 79851954 79852272 -9652281 + AluJo SINE Alu 1 307 -5 679 269 60 0 chr17 79852353 79852535 -9652018 + MIR SINE MIR 70 262 0 693 287 161 38 chr17 79852922 79853424 -9651129 - MLT1K LTR MaLR -14 574 11 2464 96 0 0 chr17 79853633 79853935 -9650618 - AluSg SINE Alu -8 302 1 1494 224 27 19 chr17 79854755 79855126 -9649427 - MLT1A2 LTR MaLR 0 374 1 2218 120 3 16 chr17 79855143 79855452 -9649101 - AluSg SINE Alu -5 305 1 280 267 118 31 chr17 79855495 79855690 -9648863 + LTR48 LTR ERV1 570 781 -6 478 130 7 138 chr17 79855984 79856002 -9648551 - MER92B LTR ERV1 -9 627 608 2232 124 0 0 chr17 79856002 79856309 -9648244 + AluSx SINE Alu 1 307 -5 478 130 7 138 chr17 79856309 79856428 -9648125 - MER92B LTR ERV1 -28 608 508 1780 223 81 21 chr17 79856515 79856987 -9647566 - MER92B LTR ERV1 -136 500 1 207 171 0 0 chr17 79856991 79857026 -9647527 + (CA)n Simple_repeat Simple_repeat 2 36 0 654 202 91 71 chr17 79857559 79857757 -9646796 + MER63A DNA MER1_type 1 202 -8 2177 89 33 3 chr17 79857858 79858160 -9646393 + AluY SINE Alu 1 311 0 2010 73 4 52 chr17 79859789 79860061 -9644492 + AluSx SINE Alu 1 259 -53 421 266 190 13 chr17 79861225 79861383 -9643170 - MER5A DNA MER1_type 0 189 4 225 211 79 66 chr17 79862575 79862651 -9641902 + MER96B DNA MER1_type? 2 78 -339 580 262 99 30 chr17 79862969 79863232 -9641321 + MER96B DNA MER1_type? 131 411 -6 198 270 148 9 chr17 79863317 79863432 -9641121 + MIR SINE MIR 117 247 -15 409 259 145 24 chr17 79863943 79864109 -9640444 + MER5A DNA MER1_type 4 189 0 416 284 140 48 chr17 79864331 79864581 -9639972 + LTR33 LTR ERVL 109 381 -140 * 1926 173 9 9 chr17 79864577 79864924 -9639629 + LTR32 LTR ERVL 15 361 -110 851 177 13 13 chr17 79864907 79865065 -9639488 + LTR32 LTR ERVL 314 471 0 * 1545 212 109 8 chr17 79865123 79865491 -9639062 - MER74A LTR ERVL -21 537 133 2452 91 0 7 chr17 79865586 79865895 -9638658 + AluSc SINE Alu 1 307 -2 258 258 56 0 chr17 79865995 79866084 -9638469 + LTR33 LTR ERVL 424 517 -4 2228 133 0 0 chr17 79866303 79866605 -9637948 - AluSx SINE Alu -10 302 1 270 0 0 0 chr17 79867261 79867291 -9637262 + (CA)n Simple_repeat Simple_repeat 2 31 0 779 188 44 143 chr17 79867327 79867450 -9637103 + MER45C DNA AcHobo 4 138 -815 2294 103 0 0 chr17 79867450 79867742 -9636811 + AluSq SINE Alu 1 292 -21 779 188 44 143 chr17 79867742 79867755 -9636798 + MER45C DNA AcHobo 138 151 -802 2390 75 0 28 chr17 79867755 79868075 -9636478 + AluY SINE Alu 1 311 0 779 188 44 143 chr17 79868075 79868230 -9636323 + MER45C DNA AcHobo 151 267 -686 628 243 158 35 chr17 79868294 79868496 -9636057 + MER45C DNA AcHobo 693 919 -34 2160 129 0 19 chr17 79868516 79868834 -9635719 - AluSx SINE Alu 0 312 1 224 255 85 32 chr17 79868950 79869044 -9635509 - L2 LINE L2 -1 3271 3173 2286 121 0 0 chr17 79869439 79869744 -9634809 + AluSx SINE Alu 1 305 -7 353 295 205 13 chr17 79869786 79870010 -9634543 - LTR16C LTR ERVL -113 378 112 409 315 133 12 chr17 79870675 79870840 -9633713 - MIR SINE MIR -1 261 77 496 339 32 4 chr17 79872227 79872463 -9632090 + MIR SINE MIR 17 262 0 462 261 37 15 chr17 79873749 79873883 -9630670 + MIR SINE MIR 34 170 -92 2237 118 13 7 chr17 79873939 79874245 -9630308 - AluSg SINE Alu -2 308 1 2307 90 21 0 chr17 79874759 79875047 -9629506 - AluSg1 SINE Alu -15 294 1 1311 235 49 16 chr17 79876304 79876674 -9627879 - L1ME1 LINE L1 0 6166 5785 2379 84 3 3 chr17 79876674 79876970 -9627583 + AluSq SINE Alu 1 296 -17 507 168 18 62 chr17 79877075 79877188 -9627365 + THE1C LTR MaLR 95 202 -173 277 83 0 0 chr17 79877179 79877215 -9627338 + THE1C LTR MaLR 317 352 -3 * 377 253 253 38 chr17 79877215 79877598 -9626955 - LTR33 LTR ERVL -53 468 1 226 275 14 0 chr17 79877607 79877676 -9626877 - MIR SINE MIR -133 129 60 304 277 42 8 chr17 79878148 79878267 -9626286 + L2 LINE L2 2392 2514 -800 1357 287 61 8 chr17 79878708 79879185 -9625368 + LTR33 LTR ERVL 20 521 0 901 185 57 38 chr17 79879354 79879565 -9624988 - MER20 DNA MER1_type 0 219 5 934 173 61 37 chr17 79880817 79881031 -9623522 + MER20 DNA MER1_type 1 219 0 384 278 26 17 chr17 79881330 79881445 -9623108 - MIR SINE MIR -59 149 34 724 250 135 13 chr17 79881462 79881889 -9622664 - LTR33A LTR ERVL -8 515 1 186 267 0 22 chr17 79882721 79882766 -9621787 + L2 LINE L2 3209 3252 -20 258 263 18 0 chr17 79882931 79882988 -9621565 + MLT1K LTR MaLR 184 241 -347 645 172 45 6 chr17 79883039 79883196 -9621357 + L1MC1 LINE L1 6169 6331 -2 2089 146 7 0 chr17 79883277 79883579 -9620974 + AluSx SINE Alu 7 310 -2 716 233 127 20 chr17 79883985 79884238 -9620315 + MLT1K LTR MaLR 305 584 -4 215 357 12 24 chr17 79884989 79885073 -9619480 + MIR SINE MIR 31 113 -95 2302 99 26 3 chr17 79885505 79885807 -9618746 + AluSc SINE Alu 1 309 0 350 291 42 48 chr17 79885897 79886062 -9618491 - MIR3 SINE MIR -24 184 21 467 298 46 53 chr17 79886634 79886794 -9617759 + MIR SINE MIR 8 171 -91 1901 180 107 26 chr17 79886794 79887261 -9617292 - MLT1D LTR MaLR 0 505 1 467 298 46 53 chr17 79887261 79887339 -9617214 + MIR SINE MIR 171 248 -14 492 291 169 0 chr17 79888478 79888650 -9615903 - MIR SINE MIR 0 262 62 1027 222 364 8 chr17 79889095 79889614 -9614939 + LTR50 LTR ERVL 83 786 -9 1024 283 30 67 chr17 79890015 79890418 -9614135 - MLT1J2 LTR MaLR 0 450 63 1929 203 36 5 chr17 79890554 79890938 -9613615 - MSTD LTR MaLR 0 396 1 6475 226 52 33 chr17 79890938 79891424 -9613129 - MSTD-int LTR MaLR 0 1735 1260 2202 113 20 0 chr17 79891424 79891717 -9612836 - AluSg SINE Alu -11 299 1 6475 226 52 33 chr17 79891717 79892262 -9612291 - MSTD-int LTR MaLR -475 1260 727 1248 243 66 19 chr17 79892262 79892640 -9611913 - MSTD LTR MaLR 0 396 1 6475 226 52 33 chr17 79892640 79893325 -9611228 - MSTD-int LTR MaLR -1008 727 1 1775 200 62 34 chr17 79893326 79893711 -9610842 - MSTD LTR MaLR 0 396 1 655 288 104 21 chr17 79894278 79894664 -9609889 + MLT1K LTR MaLR 169 586 -2 397 261 52 67 chr17 79894749 79894883 -9609670 + MER5A DNA MER1_type 37 170 -10 881 340 96 4 chr17 79894933 79894986 -9609567 + L3 LINE CR1 1065 1112 -465 2432 152 13 10 chr17 79894986 79895381 -9609172 + MSTD LTR MaLR 1 396 0 881 340 96 4 chr17 79895381 79895795 -9608758 + L3 LINE CR1 1112 1575 -2 691 172 60 0 chr17 79896204 79896320 -9608233 + FLAM_C SINE Alu 2 124 -19 625 271 41 106 chr17 79896700 79897191 -9607362 - MLT1K LTR MaLR -3 585 127 244 235 15 0 chr17 79897484 79897620 -9606933 + (CA)n Simple_repeat Simple_repeat 2 139 0 220 225 28 0 chr17 79897635 79897706 -9606847 + (CA)n Simple_repeat Simple_repeat 1 73 0 400 269 11 33 chr17 79897755 79897989 -9606564 + (CA)n Simple_repeat Simple_repeat 1 228 0 219 247 0 0 chr17 79898005 79898094 -9606459 + (CA)n Simple_repeat Simple_repeat 1 89 0 209 349 35 35 chr17 79898311 79898397 -9606156 - L3b LINE CR1 -56 1527 1442 180 310 0 0 chr17 79900274 79900361 -9604192 + (CA)n Simple_repeat Simple_repeat 2 88 0 625 284 20 41 chr17 79902195 79902392 -9602161 + MER117 DNA MER1_type 3 195 -2 757 217 29 11 chr17 79902756 79902931 -9601622 - MER5B DNA MER1_type 0 178 1 479 230 211 7 chr17 79902958 79903110 -9601443 - MER5A DNA MER1_type 0 189 7 517 217 17 9 chr17 79903124 79903239 -9601314 + MER5A DNA MER1_type 1 116 -73 281 238 178 20 chr17 79904161 79904262 -9600291 - L2 LINE L2 -5 3267 3151 2518 111 30 38 chr17 79905218 79905614 -9598939 + L1PA10 LINE L1 5774 6166 -2 265 253 13 0 chr17 79906080 79906155 -9598398 - L1ME1 LINE L1 -6 6160 6085 1830 149 3 0 chr17 79906597 79906886 -9597667 - AluJb SINE Alu -22 290 1 816 174 0 14 chr17 79906894 79907038 -9597515 - FLAM_C SINE Alu 0 143 2 415 266 18 0 chr17 79908345 79908454 -9596099 - MIR3 SINE MIR -32 176 66 2314 99 0 0 chr17 79909010 79909314 -9595239 + AluSx SINE Alu 1 304 -8 1499 169 28 14 chr17 79909483 79909773 -9594780 + AluJb SINE Alu 1 294 -18 625 176 9 0 chr17 79910219 79910327 -9594226 - FLAM_C SINE Alu -11 132 24 1518 90 133 29 chr17 79910439 79910717 -9593836 + AluY SINE Alu 1 307 -4 2023 107 7 3 chr17 79910941 79911230 -9593323 + AluY SINE Alu 1 290 -21 435 287 64 25 chr17 79911448 79911605 -9592948 - MIR SINE MIR -93 169 7 4066 128 46 35 chr17 79911658 79912475 -9592078 - pTR5 LTR ERV1 -145 2293 1486 237 108 0 0 chr17 79912475 79912512 -9592041 + (CGGGGG)n Simple_repeat Simple_repeat 5 41 0 4066 128 46 35 chr17 79912512 79912943 -9591610 - pTR5 LTR ERV1 -952 1486 276 223 184 41 0 chr17 79913532 79913581 -9590972 + G-rich Low_complexity Low_complexity 3 53 0 642 286 12 0 chr17 79914498 79914669 -9589884 - LTR16C LTR ERVL -21 470 298 285 75 0 0 chr17 79915894 79915934 -9588619 + (TG)n Simple_repeat Simple_repeat 2 41 0 1072 161 9 58 chr17 79916080 79916303 -9588250 + MER20 DNA MER1_type 6 217 -2 2339 93 0 0 chr17 79917484 79917795 -9586758 + AluY SINE Alu 1 311 0 217 259 52 17 chr17 79918187 79918245 -9586308 + L2 LINE L2 3198 3257 -15 2162 87 31 0 chr17 79918249 79918535 -9586018 - AluSx SINE Alu -16 296 2 214 218 165 68 chr17 79918879 79919012 -9585541 + MIR SINE MIR 40 185 -77 233 215 86 75 chr17 79919107 79919200 -9585353 + L2 LINE L2 3200 3293 -20 1911 117 0 11 chr17 79919200 79919519 -9585034 - AluSg SINE Alu 0 316 1 952 107 15 0 chr17 79919519 79919650 -9584903 - AluSg SINE Alu -177 133 1 210 260 0 55 chr17 79919854 79919927 -9584626 - MIR SINE MIR -55 153 85 1755 181 24 21 chr17 79920124 79920461 -9584092 - MER58B DNA MER1_type 0 341 4 2010 137 0 7 chr17 79920783 79921112 -9583441 + AluSx SINE Alu 1 312 0 314 327 37 0 chr17 79921587 79921694 -9582859 - L2 LINE L2 -1 3271 3161 384 337 47 0 chr17 79922554 79922726 -9581827 + MIR SINE MIR 5 184 -78 3708 168 53 122 chr17 79922782 79923782 -9580771 - MER21A LTR ERV1 0 931 1 209 318 221 13 chr17 79924122 79924276 -9580277 + MIR SINE MIR 13 198 -64 479 258 116 30 chr17 79924789 79924922 -9579631 - L2 LINE L2 0 3313 3156 243 0 0 0 chr17 79924922 79924949 -9579604 + (CA)n Simple_repeat Simple_repeat 2 28 0 479 258 116 30 chr17 79924949 79925013 -9579540 - L2 LINE L2 -157 3156 3099 858 150 39 13 chr17 79925024 79925177 -9579376 - FRAM SINE Alu 0 40 1 323 275 70 92 chr17 79925221 79925494 -9579059 + MLT1H LTR MaLR 1 267 -282 1719 216 142 2 chr17 79925601 79926032 -9578521 - MLT1E2 LTR MaLR 0 626 136 2232 110 7 0 chr17 79926035 79926345 -9578208 - THE1B LTR MaLR 0 364 53 315 244 43 43 chr17 79929948 79930047 -9574506 + MER5B DNA MER1_type 51 152 -26 2257 94 0 28 chr17 79930047 79930365 -9574188 + AluSx SINE Alu 4 312 0 315 244 43 43 chr17 79930365 79930380 -9574173 + MER5B DNA MER1_type 151 165 -13 1619 220 61 46 chr17 79930580 79931040 -9573513 + MLT1C LTR MaLR 1 467 0 455 319 72 34 chr17 79931528 79931820 -9572733 - LTR16C LTR ERVL 0 491 189 451 289 13 26 chr17 79933666 79933822 -9570731 - L2 LINE L2 -2 3311 3158 779 323 186 25 chr17 79934088 79934766 -9569787 + L2 LINE L2 1739 2525 -789 438 327 126 43 chr17 79934890 79935244 -9569309 - L2 LINE L2 -251 3062 2739 2273 95 0 3 chr17 79935244 79935540 -9569013 + AluSx SINE Alu 1 295 -17 438 327 126 43 chr17 79935540 79935795 -9568758 - L2 LINE L2 -574 2739 2385 1500 232 133 32 chr17 79935824 79936298 -9568255 + LTR33A LTR ERVL 2 523 0 315 316 45 15 chr17 79936436 79936569 -9567984 - L3 LINE CR1 -1 1576 1440 410 145 0 135 chr17 79936569 79936688 -9567865 - MLT1H LTR MaLR 0 549 443 2253 181 26 90 chr17 79937106 79937686 -9566867 + MLT2B3 LTR ERVL 12 554 0 270 0 0 0 chr17 79938481 79938511 -9566042 + (CA)n Simple_repeat Simple_repeat 1 30 0 791 303 37 55 chr17 79938742 79939121 -9565432 - MLT1I LTR MaLR 0 409 38 204 271 0 0 chr17 79939232 79939280 -9565273 + CT-rich Low_complexity Low_complexity 2 49 0 242 246 185 15 chr17 79939284 79939414 -9565139 - L2 LINE L2 0 3313 3162 * 533 246 123 15 chr17 79939411 79939679 -9564874 + L2 LINE L2 2418 2714 -600 2389 76 7 0 chr17 79939682 79939986 -9564567 + AluY SINE Alu 1 306 -5 1252 141 40 40 chr17 79939995 79940222 -9564331 + AluJb SINE Alu 3 229 -83 226 343 9 9 chr17 79940744 79940849 -9563704 + LTR16C LTR ERVL 357 461 -30 2027 80 36 4 chr17 80142342 80142652 -9361901 - AluSg SINE Alu 0 319 1 243 0 0 0 chr17 80143051 80143078 -9361475 + (T)n Simple_repeat Simple_repeat 1 27 0 1022 185 40 14 chr17 80143458 80143640 -9360913 - AluJo SINE Alu 0 312 136 327 25 0 0 chr17 80143640 80143680 -9360873 + (TA)n Simple_repeat Simple_repeat 2 41 0 180 0 0 0 chr17 80143680 80143700 -9360853 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1022 185 40 14 chr17 80143700 80143738 -9360815 - AluJo SINE Alu -175 137 85 785 137 30 23 chr17 80143857 80143988 -9360565 - FLAM_C SINE Alu -1 132 1 1990 117 0 4 chr17 80146168 80146481 -9358072 + AluSx SINE Alu 5 316 0 214 245 38 0 chr17 80146715 80146768 -9357785 + MER5A DNA MER1_type 59 113 -76 2314 118 48 25 chr17 80146823 80147179 -9357374 + THE1B LTR MaLR 1 364 0 2121 102 10 0 chr17 80147402 80147695 -9356858 + AluSp SINE Alu 1 296 -17 2121 135 0 0 chr17 80147705 80148017 -9356536 + AluSx SINE Alu 1 312 0 1670 199 0 0 chr17 80148259 80148555 -9355998 + AluJb SINE Alu 1 296 -16 465 232 0 0 chr17 80148585 80148684 -9355869 + LTR62 LTR ERVK 1 99 -620 1766 147 4 0 chr17 80148684 80148963 -9355590 + AluJb SINE Alu 1 280 -32 588 119 16 79 chr17 80148976 80149102 -9355451 + LTR62 LTR ERVK 87 204 -515 2347 80 3 3 chr17 80149427 80149740 -9354813 - AluSq SINE Alu 0 313 1 2011 88 39 3 chr17 80151619 80151903 -9352650 - AluSg SINE Alu -16 294 1 264 178 0 0 chr17 80152281 80152354 -9352199 + (TG)n Simple_repeat Simple_repeat 2 74 0 759 199 0 0 chr17 80152401 80152855 -9351698 + (TG)n Simple_repeat Simple_repeat 1 454 0 669 178 0 0 chr17 80152877 80153100 -9351453 + (TG)n Simple_repeat Simple_repeat 1 223 0 2277 101 0 0 chr17 80154368 80154665 -9349888 + AluSq SINE Alu 1 297 -16 2543 40 0 0 chr17 80154665 80154964 -9349589 + AluY SINE Alu 1 299 -12 379 241 121 17 chr17 80156669 80156785 -9347768 - MIR SINE MIR -114 148 21 742 163 0 37 chr17 80157657 80157792 -9346761 + FLAM_A SINE Alu 4 133 0 1450 138 69 39 chr17 80160533 80160793 -9343760 - AluJo SINE Alu -43 269 2 2393 67 0 0 chr17 80162351 80162649 -9341904 - AluY SINE Alu -13 298 1 636 188 0 114 chr17 80162795 80162944 -9341609 - FLAM_C SINE Alu -1 132 1 213 219 0 94 chr17 80163415 80163479 -9341074 - MER5A DNA MER1_type -16 173 116 1985 157 0 0 chr17 80163699 80164011 -9340542 - AluSx SINE Alu 0 312 1 331 235 0 0 chr17 80164014 80164082 -9340471 - MER5A DNA MER1_type -117 72 5 429 68 0 0 chr17 80166677 80166736 -9337817 + Alu SINE Alu 246 304 -6 525 248 69 0 chr17 80166862 80166910 -9337643 - MIR SINE MIR -3 259 216 1725 143 61 4 chr17 80166910 80167190 -9337363 - AluJb SINE Alu -16 296 1 525 248 69 0 chr17 80167190 80167286 -9337267 - MIR SINE MIR -46 216 105 2003 133 0 7 chr17 80167435 80167736 -9336817 - AluSx SINE Alu -9 303 5 347 241 23 0 chr17 80169113 80169200 -9335353 - MER117 DNA MER1_type -107 90 2 1060 155 0 18 chr17 80170035 80170203 -9334350 + AluJb SINE Alu 2 166 -146 226 256 12 81 chr17 80170372 80170458 -9334095 + MIR SINE MIR 26 105 -157 629 175 20 37 chr17 80170467 80170587 -9333966 + MLT1A1 LTR MaLR 1 152 -213 2220 101 10 0 chr17 80170587 80170893 -9333660 + AluSp SINE Alu 2 310 -3 629 175 20 37 chr17 80170893 80170966 -9333587 + MLT1A1 LTR MaLR 152 225 -140 1739 147 39 3 chr17 80170967 80171253 -9333300 + AluJb SINE Alu 1 296 -16 1943 124 0 39 chr17 80171330 80171636 -9332917 + AluSx SINE Alu 1 294 -18 29 0 0 0 chr17 80171644 80171673 -9332880 + AT_rich Low_complexity Low_complexity 1 29 0 3176 223 44 19 chr17 80171699 80172119 -9332434 - L1MD2 LINE L1 -249 6110 5702 1199 168 62 10 chr17 80172119 80172327 -9332226 + MER20 DNA MER1_type 1 219 0 3176 223 44 19 chr17 80172327 80172369 -9332184 - L1MD2 LINE L1 -657 5702 5663 2934 73 0 16 chr17 80172369 80172750 -9331803 + THE1C LTR MaLR 1 375 0 3176 223 44 19 chr17 80172750 80173240 -9331313 - L1MD2 LINE L1 -696 5663 5128 2169 114 0 0 chr17 80173266 80173564 -9330989 + AluSx SINE Alu 3 300 -12 849 235 20 104 chr17 80173564 80173969 -9330584 - L1MD2 LINE L1 -1157 4989 4619 2304 97 3 0 chr17 80173971 80174281 -9330272 - AluY SINE Alu 0 311 1 250 289 44 77 chr17 80175149 80175308 -9329245 + MIR SINE MIR 44 191 -65 1098 189 14 22 chr17 80175499 80175721 -9328832 + AluJo SINE Alu 1 220 -92 286 162 3 119 chr17 80175721 80175809 -9328744 + AluJb SINE Alu 86 151 -151 1186 192 27 18 chr17 80177299 80177518 -9327035 - MER58A DNA MER1_type 0 224 4 648 241 58 5 chr17 80177793 80178000 -9326553 - MER20 DNA MER1_type 0 219 2 300 53 0 0 chr17 80178420 80178458 -9326095 + (CA)n Simple_repeat Simple_repeat 2 39 0 27 29 0 0 chr17 80178920 80178954 -9325599 + AT_rich Low_complexity Low_complexity 1 34 0 2012 135 0 0 chr17 80179792 80180089 -9324464 + AluSx SINE Alu 13 309 -3 347 283 19 39 chr17 80180218 80180392 -9324161 - MER5A DNA MER1_type -5 184 2 218 361 53 8 chr17 80180868 80181001 -9323552 + L2 LINE L2 3171 3309 -4 180 152 0 0 chr17 80181281 80181314 -9323239 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 183 354 0 15 chr17 80181593 80181611 -9322942 + MER5B DNA MER1_type 108 125 -53 643 223 8 0 chr17 80181611 80181741 -9322812 - FLAM_A SINE Alu 0 133 3 183 354 0 15 chr17 80181741 80181787 -9322766 + MER5B DNA MER1_type 125 171 -7 1638 249 104 20 chr17 80181946 80182457 -9322096 + MLT2B3 LTR ERVL 1 554 0 2163 112 0 7 chr17 80182523 80182828 -9321725 - AluSx SINE Alu -9 303 1 805 167 12 6 chr17 80183345 80183507 -9321046 - AluJb SINE Alu -13 299 137 2275 81 3 7 chr17 80184133 80184442 -9320111 - AluSx SINE Alu -4 308 1 1212 229 3 17 chr17 80185191 80185484 -9319069 + AluJo SINE Alu 24 312 0 921 238 116 34 chr17 80185498 80185826 -9318727 + MLT1C LTR MaLR 111 465 -2 290 182 0 0 chr17 80185852 80185907 -9318646 - AluSx SINE Alu -1 301 247 1331 104 6 0 chr17 80185907 80186089 -9318464 - AluSx SINE Alu -128 184 2 587 226 125 48 chr17 80186842 80187017 -9317536 + MLT1F LTR MaLR 85 245 -297 1713 176 17 3 chr17 80187017 80187312 -9317241 + AluJb SINE Alu 1 299 -13 587 226 125 48 chr17 80187312 80187555 -9316998 + MLT1F LTR MaLR 245 525 -17 292 268 167 24 chr17 80187830 80187998 -9316555 - MIR SINE MIR -44 218 27 2197 114 0 13 chr17 80188049 80188411 -9316142 - AluSx SINE Alu 0 358 1 1826 140 35 3 chr17 80188413 80188698 -9315855 - AluSx SINE Alu -18 294 1 797 153 0 8 chr17 80188698 80188829 -9315724 - AluJo/FLAM SINE Alu -171 131 2 191 268 73 24 chr17 80188893 80188975 -9315578 + MIR SINE MIR 25 110 -152 432 208 208 40 chr17 80189090 80189263 -9315290 + MLT1G LTR MaLR 87 288 -302 794 158 30 8 chr17 80189385 80189518 -9315035 + AluJo SINE Alu 107 242 -70 429 237 34 34 chr17 80189518 80189636 -9314917 + MLT1G LTR MaLR 438 555 0 991 240 58 78 chr17 80189716 80190112 -9314441 + MLT1C LTR MaLR 53 440 -27 2180 106 7 0 chr17 80190147 80190449 -9314104 - AluSq SINE Alu -4 309 6 189 0 0 0 chr17 80190951 80190972 -9313581 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1628 149 14 18 chr17 80190981 80191256 -9313297 - AluJo SINE Alu -37 275 2 1817 132 11 34 chr17 80191351 80191614 -9312939 + MER47A DNA MER2_type 26 281 -2042 1485 148 42 42 chr17 80191614 80191797 -9312756 - AluJo SINE Alu -19 293 108 2038 125 0 7 chr17 80191797 80192092 -9312461 - AluSx SINE Alu -19 293 1 1485 148 42 42 chr17 80192092 80192191 -9312362 - AluJo SINE Alu -203 109 11 1817 132 11 34 chr17 80192191 80192276 -9312277 + MER47A DNA MER2_type 281 366 0 269 372 0 0 chr17 80192443 80192537 -9312016 - MIR SINE MIR -71 137 44 1070 143 0 24 chr17 80192918 80193086 -9311467 + FRAM SINE Alu 1 163 -13 1888 132 0 0 chr17 80193092 80193400 -9311153 + AluSx SINE Alu 21 328 0 888 217 109 40 chr17 80193636 80193841 -9310712 + MLT1C LTR MaLR 10 199 -268 1816 170 3 0 chr17 80193841 80194130 -9310423 + AluJo SINE Alu 7 296 -16 2385 71 0 7 chr17 80194135 80194473 -9310080 + AluY SINE Alu 1 311 0 888 217 109 40 chr17 80194473 80194600 -9309953 + MLT1C LTR MaLR 202 366 -101 1209 181 80 0 chr17 80194637 80194863 -9309690 - AluJb SINE Alu -1 311 68 468 218 23 15 chr17 80194894 80195027 -9309526 + MLT1C LTR MaLR 378 511 -31 2051 86 38 17 chr17 80195092 80195383 -9309170 + AluSq SINE Alu 1 297 -16 1531 144 65 40 chr17 80195393 80195671 -9308882 + AluJo SINE Alu 1 285 -27 685 199 53 0 chr17 80195675 80195806 -9308747 + AluJb SINE Alu 1 138 -174 384 231 119 62 chr17 80195808 80195905 -9308648 + MIR SINE MIR 71 182 -80 1752 159 45 0 chr17 80195905 80196195 -9308358 + AluSx SINE Alu 1 303 -9 384 231 119 62 chr17 80196195 80196257 -9308296 + MIR SINE MIR 182 239 -23 268 295 0 57 chr17 80196287 80196392 -9308161 - MIR SINE MIR -86 122 24 677 66 0 0 chr17 80196504 80196595 -9307958 - 5S rRNA rRNA -30 91 1 2135 116 0 0 chr17 80196985 80197279 -9307274 + AluSx SINE Alu 1 294 -18 2749 7 0 0 chr17 80197943 80198248 -9306305 + AluYa5 SINE Alu 1 305 -6 2400 69 3 3 chr17 80198427 80198732 -9305821 + AluSp SINE Alu 1 305 -8 518 103 0 0 chr17 80198832 80198931 -9305622 + AluSg/x SINE Alu 216 314 0 263 311 67 52 chr17 80200427 80200562 -9303991 + MIR SINE MIR 86 222 -40 185 357 31 39 chr17 80200770 80200899 -9303654 - L2 LINE L2 0 3272 3145 2065 117 0 29 chr17 80200926 80201235 -9303318 + AluSx SINE Alu 1 300 -12 210 338 36 106 chr17 80202916 80203191 -9301362 - L2 LINE L2 -8 3264 3009 1218 121 0 6 chr17 80203370 80203544 -9301009 + AluJo SINE Alu 1 173 -139 396 205 0 2 chr17 80203666 80203760 -9300793 - MLT1B LTR MaLR -87 287 195 * 504 191 0 0 chr17 80203755 80203849 -9300704 + MLT1B LTR MaLR 52 145 -245 360 148 0 0 chr17 80204183 80204244 -9300309 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 640 154 10 0 chr17 80204244 80204348 -9300205 - AluJb SINE Alu -187 125 21 1875 139 3 17 chr17 80204349 80204643 -9299910 - AluJb SINE Alu -16 296 7 2369 64 0 22 chr17 80204857 80205171 -9299382 - AluSx SINE Alu -5 307 1 1759 148 7 26 chr17 80205640 80205943 -9298610 + AluJo SINE Alu 1 297 -15 386 309 16 16 chr17 80208114 80208237 -9296316 + MIR3 SINE MIR 56 178 -30 1904 120 40 10 chr17 80208253 80208553 -9296000 + AluSx SINE Alu 3 311 -1 823 167 0 0 chr17 80208710 80208836 -9295717 - FLAM_C SINE Alu -3 130 5 2451 87 0 0 chr17 80208855 80209167 -9295386 - AluSq SINE Alu -1 312 1 551 313 31 10 chr17 80209179 80209371 -9295182 - MIR SINE MIR -57 205 10 230 330 78 0 chr17 80209644 80209747 -9294806 - L2 LINE L2 -605 2709 2599 2279 104 3 0 chr17 80210178 80210486 -9294067 - AluSx SINE Alu -3 309 1 189 0 0 0 chr17 80210486 80210507 -9294046 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1965 98 25 4 chr17 80210507 80210781 -9293772 - AluSx SINE Alu -30 282 3 483 210 51 14 chr17 80211030 80211168 -9293385 - MER89 LTR ERV1 -1 558 416 659 202 30 71 chr17 80211169 80211325 -9293228 - MER4C LTR ERV1 -1 464 316 2300 94 0 0 chr17 80211325 80211624 -9292929 + AluSq SINE Alu 1 299 -14 659 202 30 71 chr17 80211624 80211665 -9292888 - MER4C LTR ERV1 -149 316 275 313 317 8 8 chr17 80211686 80211809 -9292744 - LTR34 LTR ERV1 -160 539 417 1693 149 24 7 chr17 80211909 80212378 -9292175 + AluJb SINE Alu 1 474 0 198 0 0 0 chr17 80212377 80212399 -9292154 + (GGGGA)n Simple_repeat Simple_repeat 3 24 0 1301 195 55 74 chr17 80212405 80212518 -9292035 - MER89 LTR ERV1 -147 412 298 2032 151 0 0 chr17 80212518 80212823 -9291730 - AluJb SINE Alu -7 305 1 1301 195 55 74 chr17 80212823 80213129 -9291424 - MER89 LTR ERV1 -261 298 1 365 313 9 0 chr17 80213142 80213254 -9291299 - MIR SINE MIR -109 153 41 182 360 44 53 chr17 80213255 80213369 -9291184 + L2 LINE L2 3160 3272 0 284 291 145 23 chr17 80213909 80214081 -9290472 + MIR3 SINE MIR 9 201 -7 2160 98 0 19 chr17 80214754 80215061 -9289492 - AluSg SINE Alu -9 301 1 381 198 0 0 chr17 80216403 80216484 -9288069 + CT-rich Low_complexity Low_complexity 3 83 0 434 366 69 40 chr17 80216484 80217154 -9287399 - HAL1 LINE L1 -1206 1301 912 1227 160 172 27 chr17 80217154 80217416 -9287137 - AluJb SINE Alu -2 300 1 434 366 69 40 chr17 80217416 80217451 -9287102 - HAL1 LINE L1 -1595 912 880 1383 171 117 4 chr17 80217505 80217914 -9286639 + LTR54 LTR ERV1 1 496 -2 1989 222 79 19 chr17 80218118 80218716 -9285837 + MLT1E2 LTR MaLR 1 626 0 1823 150 3 7 chr17 80219135 80219429 -9285124 + AluJo SINE Alu 1 293 -19 1100 262 65 50 chr17 80219487 80219930 -9284623 + MLT1J2 LTR MaLR 1 450 0 231 154 19 19 chr17 80220312 80220364 -9284189 + GA-rich Low_complexity Low_complexity 4 55 0 358 275 114 20 chr17 80224390 80224539 -9280014 + MIR SINE MIR 35 197 -65 1719 153 13 35 chr17 80226956 80227269 -9277284 - AluSx SINE Alu -6 306 1 494 275 155 7 chr17 80227286 80227506 -9277047 - MIR SINE MIR 0 262 7 279 222 0 0 chr17 80228301 80228355 -9276198 - MER91B DNA MER1_type -2 188 135 2362 84 0 0 chr17 80228371 80228668 -9275885 + AluSx SINE Alu 1 297 -15 274 323 158 15 chr17 80228694 80228827 -9275726 - MER91B DNA MER1_type -37 153 2 290 319 58 22 chr17 80228929 80229067 -9275486 - MIR SINE MIR -89 173 31 405 310 125 16 chr17 80230038 80230222 -9274331 + MIR SINE MIR 19 222 -40 197 293 0 0 chr17 80230854 80230912 -9273641 + MIR SINE MIR 57 114 -148 2177 116 0 0 chr17 80230914 80231215 -9273338 - AluSx SINE Alu -11 301 1 512 298 62 45 chr17 80231303 80231545 -9273008 + MIR SINE MIR 17 262 0 919 144 43 43 chr17 80231714 80231902 -9272651 - MER53 DNA DNA 0 189 2 186 264 75 0 chr17 80234534 80234587 -9269966 + MIR SINE MIR 47 103 -159 360 271 83 21 chr17 80235063 80235207 -9269346 + MIR SINE MIR 3 155 -107 461 314 47 47 chr17 80237060 80237127 -9267426 - MIR SINE MIR 0 262 196 1943 107 62 0 chr17 80237127 80237417 -9267136 - AluSx SINE Alu -4 308 1 461 314 47 47 chr17 80237417 80237607 -9266946 - MIR SINE MIR -65 197 5 288 347 88 6 chr17 80238285 80238455 -9266098 + MIR SINE MIR 63 246 -16 271 299 84 9 chr17 80239124 80239231 -9265322 - MIR SINE MIR -146 116 2 274 261 102 23 chr17 80240795 80240883 -9263670 - L2 LINE L2 -188 3084 2990 202 296 0 0 chr17 80241200 80241244 -9263309 + L2 LINE L2 3224 3267 -5 * 336 304 110 34 chr17 80241238 80241335 -9263218 - MIR SINE MIR 0 262 174 2326 91 0 25 chr17 80241335 80241653 -9262900 + AluSx SINE Alu 2 311 -1 336 304 110 34 chr17 80241653 80241792 -9262761 - MIR SINE MIR -88 174 8 1472 204 27 80 chr17 80241845 80242109 -9262444 + MLT1B LTR MaLR 1 237 -153 1878 139 35 0 chr17 80242109 80242397 -9262156 + AluSx SINE Alu 1 298 -14 1472 204 27 80 chr17 80242397 80242544 -9262009 + MLT1B LTR MaLR 237 390 0 1161 119 135 0 chr17 80243149 80243342 -9261211 - MER20 DNA MER1_type 0 219 1 237 278 14 28 chr17 80243428 80243500 -9261053 + MIR SINE MIR 79 149 -59 192 40 0 0 chr17 80243703 80243728 -9260825 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 373 290 66 44 chr17 80244021 80244204 -9260349 + MER5A DNA MER1_type 3 189 0 441 203 42 0 chr17 80244212 80244330 -9260223 + L1MB8 LINE L1 5706 5828 -356 1523 160 130 7 chr17 80244336 80244605 -9259948 + AluJo SINE Alu 1 302 0 1670 126 36 0 chr17 80244817 80245094 -9259459 + AluSx SINE Alu 17 303 -9 466 201 36 2 chr17 80245096 80245213 -9259340 + L1MB8 LINE L1 5896 6017 -185 415 296 41 56 chr17 80245472 80245668 -9258885 - MIR SINE MIR -62 200 8 561 15 0 0 chr17 80246210 80246276 -9258277 + (CA)n Simple_repeat Simple_repeat 2 67 0 191 299 134 52 chr17 80246406 80246503 -9258050 - MIR SINE MIR -11 251 147 2197 114 0 0 chr17 80246579 80246877 -9257676 + AluSx SINE Alu 1 298 -14 480 279 121 16 chr17 80248047 80248237 -9256316 - MIR SINE MIR -2 260 51 430 336 90 50 chr17 80248735 80248978 -9255575 + L2 LINE L2 2773 3005 -308 1969 101 0 7 chr17 80248978 80249255 -9255298 - AluSc SINE Alu 0 309 35 430 336 90 50 chr17 80249255 80249525 -9255028 + L2 LINE L2 3005 3302 -11 2046 100 32 0 chr17 80250684 80250987 -9253566 + AluSg SINE Alu 1 312 0 31 68 0 0 chr17 80252265 80252324 -9252229 + GC_rich Low_complexity Low_complexity 1 59 0 276 296 0 23 chr17 80252975 80253063 -9251490 + MIR SINE MIR 43 128 -80 1465 97 0 39 chr17 80253387 80253622 -9250931 + AluSg/x SINE Alu 84 310 0 596 334 56 16 chr17 80254149 80254472 -9250081 - MER46C DNA MER2_type 0 338 3 414 57 0 0 chr17 80255422 80255475 -9249078 + (TCCA)n Simple_repeat Simple_repeat 2 54 0 2348 57 40 0 chr17 80255477 80255776 -9248777 - AluYa5 SINE Alu 0 311 1 180 313 0 0 chr17 80255792 80255840 -9248713 - L2 LINE L2 -1 3312 3265 2202 104 3 7 chr17 80257261 80257559 -9246994 + AluSx SINE Alu 1 297 -15 180 320 117 10 chr17 80258525 80258628 -9245925 + MER5A DNA MER1_type 50 163 -26 196 294 20 0 chr17 80258812 80258863 -9245690 - MIR SINE MIR -68 140 89 691 175 0 25 chr17 80260594 80260714 -9243839 - FLAM_C SINE Alu -16 117 1 2221 106 0 3 chr17 80261495 80261798 -9242755 - AluSx SINE Alu -10 302 1 1970 135 0 0 chr17 80261917 80262198 -9242355 - AluJo SINE Alu -31 281 1 2057 135 0 10 chr17 80262203 80262514 -9242039 - AluSx SINE Alu -4 308 1 1999 106 0 18 chr17 80262861 80263178 -9241375 + AluSc SINE Alu 1 312 0 1018 187 0 0 chr17 80263213 80263379 -9241174 + FRAM SINE Alu 1 166 0 459 0 0 0 chr17 80263596 80263647 -9240906 + (TG)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr17 80263646 80263667 -9240886 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 2123 114 3 0 chr17 80263699 80263996 -9240557 + AluSx SINE Alu 1 298 -14 493 216 23 6 chr17 80264066 80264237 -9240316 + (CA)n Simple_repeat Simple_repeat 2 175 0 2341 80 10 0 chr17 80264266 80264566 -9239987 + AluY SINE Alu 1 303 -8 227 425 75 0 chr17 80264766 80264872 -9239681 - MER5B DNA MER1_type -2 176 63 1068 144 23 0 chr17 80264914 80265088 -9239465 + FRAM SINE Alu 1 171 -5 207 0 0 0 chr17 80265718 80265741 -9238812 + (CA)n Simple_repeat Simple_repeat 2 24 0 511 257 13 53 chr17 80267889 80268041 -9236512 + L2 LINE L2 3165 3310 -3 2025 117 0 23 chr17 80269015 80269309 -9235244 + AluSx SINE Alu 1 288 -19 258 95 0 0 chr17 80269309 80269351 -9235202 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 30 27 0 0 chr17 80269419 80269456 -9235097 + AT_rich Low_complexity Low_complexity 1 37 0 382 241 138 78 chr17 80269659 80269941 -9234612 - MLT1J LTR MaLR -212 299 1 733 143 24 0 chr17 80270096 80270222 -9234331 + FLAM_C SINE Alu 11 139 -4 1529 147 0 47 chr17 80270222 80270480 -9234073 - AluJo SINE Alu -55 257 12 312 301 70 35 chr17 80270511 80270654 -9233899 - MIR SINE MIR -64 198 51 198 244 44 0 chr17 80270651 80270696 -9233857 + L2 LINE L2 3190 3236 -77 * 2167 114 0 0 chr17 80271051 80271349 -9233204 + AluSx SINE Alu 1 298 -14 493 216 23 6 chr17 80271419 80271590 -9232963 + (CA)n Simple_repeat Simple_repeat 2 175 0 2401 82 0 0 chr17 80271619 80271922 -9232631 + AluY SINE Alu 1 303 -8 228 406 75 0 chr17 80272122 80272228 -9232325 - MER5B DNA MER1_type -2 176 63 1068 144 23 0 chr17 80272270 80272444 -9232109 + FRAM SINE Alu 1 171 -5 207 0 0 0 chr17 80273074 80273097 -9231456 + (CA)n Simple_repeat Simple_repeat 2 24 0 511 257 13 53 chr17 80275248 80275400 -9229153 + L2 LINE L2 3165 3310 -3 2055 117 0 35 chr17 80276375 80276691 -9227862 + AluSx SINE Alu 1 305 -7 454 299 6 48 chr17 80277158 80277325 -9227228 + MIR SINE MIR 37 196 -66 2181 110 13 0 chr17 80277328 80277637 -9226916 + AluSq SINE Alu 1 313 0 671 118 0 0 chr17 80279015 80279153 -9225400 + AluSg/x SINE Alu 209 346 0 1676 186 14 0 chr17 80279160 80279456 -9225097 - AluJo SINE Alu -12 300 1 28 48 0 0 chr17 80279463 80279505 -9225048 + AT_rich Low_complexity Low_complexity 1 42 0 512 149 0 0 chr17 80279583 80279657 -9224896 + AluSp/q SINE Alu 177 250 -63 967 183 69 0 chr17 80279657 80279859 -9224694 + AluJb SINE Alu 85 300 -12 300 350 100 35 chr17 80280038 80280238 -9224315 + MIR SINE MIR 30 242 -20 2435 75 3 0 chr17 80280707 80281014 -9223539 - AluSp SINE Alu -5 308 1 889 125 0 22 chr17 80281015 80281151 -9223402 - AluJo/FLAM SINE Alu -169 133 1 1536 24 0 0 chr17 80281174 80281426 -9223127 + (TTCC)n Simple_repeat Simple_repeat 1 252 0 230 98 49 0 chr17 80281426 80281467 -9223086 + CT-rich Low_complexity Low_complexity 2 44 0 482 143 188 120 chr17 80281475 80281608 -9222945 - FLAM_C SINE Alu -1 142 1 328 383 37 0 chr17 80281887 80282049 -9222504 - MER91B DNA MER1_type -2 188 21 407 328 15 0 chr17 80282424 80282558 -9221995 + MER5B DNA MER1_type 6 141 -37 404 326 177 16 chr17 80282559 80282881 -9221672 + L1MC4a LINE L1 5574 5947 -1861 2235 86 7 0 chr17 80283053 80283343 -9221210 + AluSq SINE Alu 1 292 -21 277 256 62 54 chr17 80283886 80284015 -9220538 - L2 LINE L2 -213 3059 2930 1759 146 0 67 chr17 80284376 80284691 -9219862 + AluJb SINE Alu 1 294 -18 2089 122 10 6 chr17 80284693 80285005 -9219548 + AluSq SINE Alu 1 313 0 1994 124 31 3 chr17 80285618 80285909 -9218644 + AluSx SINE Alu 1 299 -13 2068 108 7 7 chr17 80285911 80286208 -9218345 + AluSc SINE Alu 3 299 -10 2094 111 19 0 chr17 80289510 80289817 -9214736 - AluSq SINE Alu 0 313 1 454 299 6 48 chr17 80289820 80289987 -9214566 - MIR SINE MIR -66 196 37 243 247 45 117 chr17 80290409 80290453 -9214100 + MER5B DNA MER1_type 1 47 -131 2144 114 0 13 chr17 80290453 80290760 -9213793 - AluSx SINE Alu -7 305 3 243 247 45 117 chr17 80290760 80290869 -9213684 + MER5B DNA MER1_type 47 143 -35 221 354 24 0 chr17 80290905 80290987 -9213566 - MIR3 SINE MIR -48 160 77 288 153 28 118 chr17 80291197 80291228 -9213325 + MER53 DNA DNA 8 40 -149 1617 151 20 14 chr17 80291228 80291520 -9213033 + AluSx SINE Alu 1 294 -18 288 153 28 118 chr17 80291520 80291632 -9212921 + MER53 DNA DNA 40 138 -51 1978 119 10 10 chr17 80291649 80291943 -9212610 - AluSq SINE Alu -19 294 1 225 227 136 23 chr17 80291995 80292083 -9212470 - MLT1J LTR MaLR -373 138 41 1871 129 0 4 chr17 80292369 80292648 -9211905 - AluJo SINE Alu -14 298 21 1659 101 13 0 chr17 80292689 80292926 -9211627 + AluSx SINE Alu 62 301 -11 191 257 9 119 chr17 80293440 80293549 -9211004 + MER5B DNA MER1_type 13 109 -69 313 311 22 0 chr17 80294178 80294268 -9210285 + MIR3 SINE MIR 65 156 -52 183 80 0 0 chr17 80294334 80294359 -9210194 + (TATTG)n Simple_repeat Simple_repeat 2 26 0 2013 142 0 7 chr17 80294368 80294678 -9209875 - AluSx SINE Alu -4 308 1 27 0 0 0 chr17 80294678 80294705 -9209848 + AT_rich Low_complexity Low_complexity 1 27 0 1880 155 3 0 chr17 80294708 80295012 -9209541 - AluJo SINE Alu -7 305 1 2300 100 3 0 chr17 80295170 80295480 -9209073 + AluSp SINE Alu 1 311 -2 274 294 79 8 chr17 80296108 80296231 -9208322 + MIR SINE MIR 35 164 -60 289 228 47 63 chr17 80296538 80296665 -9207888 + MIR3 SINE MIR 57 181 -27 783 211 29 34 chr17 80296824 80296999 -9207554 - MER45A DNA AcHobo 0 178 5 184 303 30 15 chr17 80297244 80297310 -9207243 - MIR3 SINE MIR -135 73 7 221 279 164 14 chr17 80297622 80297762 -9206791 - MIR SINE MIR -74 188 28 240 292 0 0 chr17 80297967 80298039 -9206514 + GA-rich Low_complexity Low_complexity 3 74 0 283 345 55 23 chr17 80298721 80298941 -9205612 - MIR SINE MIR -26 236 10 744 99 0 120 chr17 80299197 80299339 -9205214 + FLAM_C SINE Alu 12 136 -7 1858 146 10 0 chr17 80299361 80299655 -9204898 + AluJb SINE Alu 1 297 -15 2043 123 7 7 chr17 80299656 80299965 -9204588 + AluSq SINE Alu 1 309 -4 300 331 50 0 chr17 80300077 80300216 -9204337 - MIR SINE MIR -75 187 42 653 185 137 0 chr17 80300386 80300532 -9204021 + MER20 DNA MER1_type 1 166 -53 725 171 8 0 chr17 80301432 80301549 -9203004 + FLAM_C SINE Alu 1 118 -15 222 118 0 0 chr17 80301550 80301584 -9202969 + (TA)n Simple_repeat Simple_repeat 1 34 0 2236 95 3 0 chr17 80301585 80301881 -9202672 - AluSq SINE Alu -16 297 1 215 383 38 31 chr17 80302092 80302353 -9202200 - L2 LINE L2 -46 3267 3005 191 288 68 42 chr17 80302422 80302540 -9202013 - L2 LINE L2 -296 2976 2856 2176 104 3 0 chr17 80303295 80303593 -9200960 + AluSx SINE Alu 1 299 -13 201 338 175 26 chr17 80303772 80303926 -9200627 + MIR SINE MIR 80 256 -6 426 121 0 0 chr17 80303957 80304023 -9200530 + (TC)n Simple_repeat Simple_repeat 1 66 0 1472 195 9 28 chr17 80304023 80304202 -9200351 - AluJo SINE Alu 0 312 140 180 0 0 0 chr17 80304202 80304222 -9200331 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1472 195 9 28 chr17 80304222 80304360 -9200193 - AluJo SINE Alu -172 140 1 1685 146 0 7 chr17 80304541 80304815 -9199738 + AluSx SINE Alu 1 272 -40 1737 145 4 11 chr17 80304900 80305176 -9199377 + AluSx SINE Alu 1 274 -38 884 292 98 64 chr17 80305243 80305756 -9198797 - MLT1K LTR MaLR 0 588 59 183 377 141 15 chr17 80306342 80306633 -9197920 - L2 LINE L2 -339 2975 2722 2265 113 0 0 chr17 80306633 80306944 -9197609 + AluSx SINE Alu 1 311 -1 183 377 141 15 chr17 80306944 80307119 -9197434 - L2 LINE L2 -592 2722 2450 2417 64 0 3 chr17 80307142 80307454 -9197099 + AluY SINE Alu 1 311 0 1842 131 7 0 chr17 80307575 80307887 -9196666 - AluSx SINE Alu 0 314 1 614 216 137 0 chr17 80307923 80308062 -9196491 + AluJo SINE Alu 2 159 -153 521 111 14 0 chr17 80308165 80308237 -9196316 - AluJ/FLAM SINE Alu -233 79 7 198 294 29 15 chr17 80308651 80308719 -9195834 + MIR SINE MIR 47 115 -147 2035 122 0 3 chr17 80309219 80309507 -9195046 + AluSx SINE Alu 1 287 -25 1670 76 8 17 chr17 80309561 80309799 -9194754 - L1MA2 LINE L1 0 6304 6069 742 93 157 14 chr17 80309799 80309856 -9194697 - L1MA2 LINE L1 -80 6224 6176 2465 65 0 0 chr17 80309856 80310162 -9194391 - AluY SINE Alu -5 306 1 742 93 157 14 chr17 80310162 80310244 -9194309 - L1MA2 LINE L1 -128 6176 6065 1059 153 17 0 chr17 80310244 80310420 -9194133 - AluSg/x SINE Alu 0 312 134 446 167 0 0 chr17 80310427 80310511 -9194042 + L1M4 LINE L1 5193 5276 -870 1802 146 4 4 chr17 80310607 80310887 -9193666 - AluJb SINE Alu -19 293 14 293 209 100 82 chr17 80310887 80310997 -9193556 - MIR SINE MIR -120 142 31 532 226 113 54 chr17 80310997 80311165 -9193388 + MER5B DNA MER1_type 1 178 0 345 271 36 36 chr17 80311183 80311323 -9193230 + MER5A DNA MER1_type 18 157 -32 2304 90 7 0 chr17 80311633 80311943 -9192610 - AluSx SINE Alu 0 312 1 952 181 12 0 chr17 80313137 80313308 -9191245 - AluSg/x SINE Alu -6 306 134 1973 131 3 7 chr17 80313308 80313605 -9190948 - AluSx SINE Alu -16 296 1 2553 27 0 0 chr17 80315285 80315578 -9188975 - AluY SINE Alu -17 294 2 451 328 29 23 chr17 80315706 80315880 -9188673 + MIR SINE MIR 18 192 -70 484 149 58 0 chr17 80317175 80317262 -9187291 - L1MB3 LINE L1 0 6183 6092 867 169 47 0 chr17 80317262 80317410 -9187143 - AluJo SINE Alu -11 291 137 829 106 38 8 chr17 80317410 80317436 -9187117 - AluJo SINE Alu -176 136 112 2719 179 25 8 chr17 80317436 80317912 -9186641 + MER66B LTR ERV1 3 486 0 829 106 38 8 chr17 80317912 80318017 -9186536 - AluJo SINE Alu -200 112 1 1731 171 0 13 chr17 80318029 80318328 -9186225 - AluJb SINE Alu -17 295 1 358 152 76 0 chr17 80318328 80318394 -9186159 - L1MC3 LINE L1 -657 7128 7058 2311 73 0 3 chr17 80318829 80319130 -9185423 - AluSx SINE Alu -8 304 5 1839 165 3 0 chr17 80319448 80319751 -9184802 - AluSx SINE Alu -8 304 1 1766 159 33 0 chr17 80319754 80320056 -9184497 - AluJb SINE Alu 0 312 1 1642 153 10 10 chr17 80320651 80320946 -9183607 - AluSg SINE Alu -15 295 1 446 162 0 0 chr17 80321420 80321494 -9183059 - Alu SINE Alu -1 310 237 256 139 0 0 chr17 80321494 80321530 -9183023 - LTR12 LTR ERV1 -198 516 481 235 300 11 0 chr17 80321531 80321621 -9182932 - LTR30 LTR ERV1 -79 643 553 952 151 44 139 chr17 80321625 80321977 -9182576 - LTR12 LTR ERV1 -432 1712 54 269 231 0 0 chr17 80321977 80322029 -9182524 - LTR30 LTR ERV1 -670 52 1 1186 85 0 0 chr17 80322029 80322182 -9182371 - AluSq SINE Alu -160 153 1 311 250 13 0 chr17 80322284 80322360 -9182193 - HERVL LTR ERVL -1061 4593 4517 1262 148 134 53 chr17 80322360 80322644 -9181909 - AluJb SINE Alu -5 307 1 336 297 70 43 chr17 80322720 80322905 -9181648 + L1ME4a LINE L1 5930 6119 -2 1723 152 16 32 chr17 80322913 80323229 -9181324 + AluJb SINE Alu 1 311 -1 239 130 0 22 chr17 80323249 80323295 -9181258 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 386 147 39 192 chr17 80323510 80323617 -9180936 - MER58 DNA MER1_type 0 2420 2298 804 164 8 0 chr17 80323617 80323745 -9180808 - FLAM_C SINE Alu -3 130 2 386 147 39 192 chr17 80323745 80323787 -9180766 - MER58 DNA MER1_type -117 2303 2294 2102 119 3 0 chr17 80323787 80324089 -9180464 - AluSx SINE Alu -9 303 1 1700 144 16 26 chr17 80324665 80324970 -9179583 - AluSx SINE Alu -10 302 1 577 281 51 30 chr17 80325131 80325366 -9179187 - MIR SINE MIR -2 260 21 326 319 132 11 chr17 80325826 80326008 -9178545 - MIR SINE MIR -40 222 19 265 319 58 22 chr17 80326977 80327115 -9177438 + MIR SINE MIR 31 173 -89 2033 128 0 3 chr17 80327371 80327669 -9176884 - AluSx SINE Alu -15 297 1 896 250 66 48 chr17 80327675 80328115 -9176438 - HAL1 LINE L1 -1024 1483 1036 331 318 74 42 chr17 80328137 80328326 -9176227 - HAL1 LINE L1 -1447 1060 866 479 268 159 11 chr17 80329053 80329273 -9175280 + MIR SINE MIR 7 262 0 1684 153 13 35 chr17 80329290 80329603 -9174950 + AluSx SINE Alu 1 306 -6 284 246 109 27 chr17 80332449 80332559 -9171994 - MIR SINE MIR -78 184 66 1409 148 167 8 chr17 80332751 80333008 -9171545 + AluSg SINE Alu 3 300 0 251 268 21 62 chr17 80333376 80333473 -9171080 + MIR SINE MIR 102 194 -68 2141 110 0 7 chr17 80334031 80334341 -9170212 - AluSc SINE Alu -1 308 1 734 191 76 12 chr17 80335147 80335192 -9169361 + L1M3 LINE L1 5563 5604 -579 2040 75 75 0 chr17 80335192 80335474 -9169079 + AluSp SINE Alu 5 307 -6 734 191 76 12 chr17 80335474 80335683 -9168870 + L1M3 LINE L1 5604 5822 -361 1549 167 39 4 chr17 80335691 80335972 -9168581 + AluJo SINE Alu 3 293 -19 937 82 0 15 chr17 80335977 80336111 -9168442 + AluYb8 SINE Alu 1 132 -186 665 210 28 0 chr17 80336932 80337075 -9167478 - MIR SINE MIR -95 167 21 389 225 72 0 chr17 80337780 80337891 -9166662 - MER5A DNA MER1_type -62 127 9 258 136 0 0 chr17 80339179 80339223 -9165330 + (TG)n Simple_repeat Simple_repeat 1 44 0 564 160 45 8 chr17 80339266 80339514 -9165039 + (TG)n Simple_repeat Simple_repeat 1 257 0 497 304 84 52 chr17 80339572 80340035 -9164518 + L2 LINE L2 2424 2901 -413 224 261 0 0 chr17 80340111 80340157 -9164396 + L2 LINE L2 3222 3267 -5 296 122 0 0 chr17 80341129 80341178 -9163375 - Alu SINE Alu -253 49 1 359 280 111 31 chr17 80342127 80342352 -9162201 + L2 LINE L2 2812 3054 -218 2276 95 0 16 chr17 80342381 80342697 -9161856 - AluY SINE Alu 0 311 1 979 243 189 0 chr17 80342862 80343418 -9161135 - LTR50 LTR ERVL 0 795 34 2074 145 3 0 chr17 80343418 80343754 -9160799 + AluSx SINE Alu 1 337 0 271 200 0 0 chr17 80343754 80343804 -9160749 - LTR50 LTR ERVL -745 50 1 767 261 14 23 chr17 80344380 80344598 -9159955 - ERVL LTR ERVL -735 5029 4814 894 134 0 0 chr17 80344598 80344725 -9159828 + FLAM_C SINE Alu 1 127 -16 753 317 34 0 chr17 80344734 80344996 -9159557 - ERVL LTR ERVL -938 4826 4556 969 173 6 12 chr17 80344996 80345164 -9159389 - AluJb SINE Alu -5 307 141 604 207 17 0 chr17 80345266 80345382 -9159171 + AluJb SINE Alu 160 277 -35 1029 127 61 5 chr17 80345464 80345661 -9158892 - Tigger4(Zombi) DNA MER2_type -1 2730 2523 434 129 14 0 chr17 80345662 80345732 -9158821 - Tigger4(Zombi) DNA MER2_type -2613 118 48 2122 103 0 10 chr17 80345734 80346026 -9158527 + AluSx SINE Alu 1 289 -23 353 278 56 0 chr17 80346646 80346754 -9157799 - MER58 DNA MER1_type -2306 114 1 1992 120 7 7 chr17 80346772 80347086 -9157467 - AluSx SINE Alu 0 315 2 660 150 30 98 chr17 80347090 80347223 -9157330 - FLAM_C SINE Alu -7 126 3 2120 98 7 0 chr17 80347945 80348259 -9156294 + AluSx SINE Alu 1 312 0 410 319 72 12 chr17 80350710 80350876 -9153677 + MIR SINE MIR 16 191 -71 274 274 12 12 chr17 80350904 80350988 -9153565 - MER5B DNA MER1_type 0 178 95 262 245 214 69 chr17 80351251 80351319 -9153234 + MER5A DNA MER1_type 4 61 -128 2095 105 7 3 chr17 80351319 80351615 -9152938 + AluSq SINE Alu 1 297 -16 262 245 214 69 chr17 80351615 80351705 -9152848 + MER5A DNA MER1_type 61 185 -4 2171 107 3 0 chr17 80351708 80351999 -9152554 - AluSx SINE Alu -8 304 13 222 347 22 23 chr17 80352057 80352189 -9152364 - MER5B DNA MER1_type -43 146 1 1991 160 0 0 chr17 80352934 80353240 -9151313 + AluSx SINE Alu 1 306 -6 314 129 32 0 chr17 80353427 80353489 -9151064 + MER20 DNA MER1_type 105 168 -51 369 178 17 93 chr17 80353529 80353647 -9150906 - MER20 DNA MER1_type -102 117 9 2073 112 51 0 chr17 80354148 80354444 -9150109 + AluSx SINE Alu 1 311 -1 644 286 50 25 chr17 80354499 80354740 -9149813 - MIR SINE MIR 0 262 16 2638 196 91 40 chr17 80355057 80355418 -9149135 + MER67C LTR ERV1 5 346 -364 2130 104 27 0 chr17 80355418 80355717 -9148836 + AluSx SINE Alu 1 307 -5 2638 196 91 40 chr17 80355717 80356027 -9148526 + MER67C LTR ERV1 346 710 0 381 324 0 0 chr17 80356468 80356610 -9147943 + C-rich Low_complexity Low_complexity 1 142 0 209 294 29 15 chr17 80357030 80357098 -9147455 + MIR SINE MIR 47 115 -147 2063 122 0 3 chr17 80357598 80357886 -9146667 + AluSx SINE Alu 1 287 -25 1644 76 8 17 chr17 80357940 80358178 -9146375 - L1MA2 LINE L1 0 6304 6069 697 93 157 14 chr17 80358178 80358235 -9146318 - L1MA2 LINE L1 -80 6224 6176 2487 65 0 0 chr17 80358235 80358541 -9146012 - AluY SINE Alu -5 306 1 697 93 157 14 chr17 80358541 80358623 -9145930 - L1MA2 LINE L1 -128 6176 6065 1075 153 17 0 chr17 80358623 80358799 -9145754 - AluSg/x SINE Alu 0 312 134 424 167 0 0 chr17 80358806 80358890 -9145663 + L1M4 LINE L1 5193 5276 -870 1902 151 3 3 chr17 80358986 80359278 -9145275 - AluJb SINE Alu -19 293 2 1209 96 14 46 chr17 80359278 80359496 -9145057 + THE1B LTR MaLR 154 364 0 632 348 73 0 chr17 80359704 80359937 -9144616 - MIR SINE MIR 0 262 13 399 21 0 0 chr17 80361277 80361325 -9143228 + (CA)n Simple_repeat Simple_repeat 2 49 0 398 247 71 6 chr17 80361884 80362031 -9142522 + MIR3 SINE MIR 44 202 -6 903 221 39 15 chr17 80363048 80363252 -9141301 + MER3 DNA MER1_type 1 209 0 2127 116 3 0 chr17 80363486 80363788 -9140765 + AluSx SINE Alu 1 303 -9 335 338 53 8 chr17 80364005 80364138 -9140415 + MIR SINE MIR 69 207 -55 205 176 0 0 chr17 80364819 80364853 -9139700 - MIR3 SINE MIR -21 187 154 408 40 0 0 chr17 80364876 80364926 -9139627 + (CA)n Simple_repeat Simple_repeat 2 51 0 755 133 33 8 chr17 80364926 80365036 -9139517 - AluJo SINE Alu -182 130 15 2056 113 3 0 chr17 80365734 80366018 -9138535 - AluSx SINE Alu -15 297 13 743 136 0 23 chr17 80366671 80366803 -9137750 + Alu SINE Alu 183 311 0 1074 143 147 25 chr17 80366803 80367082 -9137471 + L1MB3 LINE L1 5815 6127 -56 1152 196 136 0 chr17 80367083 80367318 -9137235 - AluJo SINE Alu -43 269 3 1930 139 11 0 chr17 80367475 80367762 -9136791 - AluSx SINE Alu -20 292 3 513 226 176 40 chr17 80368426 80368518 -9136035 + Tigger5 DNA MER2_type 13 91 -327 1880 108 68 0 chr17 80368518 80368796 -9135757 + AluSx SINE Alu 1 297 -15 513 226 176 40 chr17 80368796 80368902 -9135651 + Tigger5 DNA MER2_type 91 238 -180 373 193 24 12 chr17 80368892 80368975 -9135578 + Tigger5 DNA MER2_type 2085 2168 -155 * 233 247 0 72 chr17 80369999 80370096 -9134457 + C-rich Low_complexity Low_complexity 3 92 0 766 124 0 76 chr17 80370414 80370559 -9133994 + AluJo SINE Alu 1 134 -178 867 103 0 52 chr17 80371659 80371795 -9132758 - FLAM_C SINE Alu 0 133 5 308 190 35 0 chr17 80372000 80372058 -9132495 + L2 LINE L2 3252 3311 -2 270 300 63 44 chr17 80373119 80373389 -9131164 - L2 LINE L2 -179 3093 2819 241 189 19 0 chr17 80373534 80373587 -9130966 + (TG)n Simple_repeat Simple_repeat 1 54 0 969 159 0 0 chr17 80374029 80374180 -9130373 - AluJb SINE Alu -11 301 151 854 145 8 0 chr17 80374188 80374394 -9130159 - FLAM_C SINE Alu 0 207 1 531 236 93 83 chr17 80374560 80374776 -9129777 - MER20 DNA MER1_type 0 219 2 182 362 95 9 chr17 80375529 80375645 -9128908 + MIR SINE MIR 2 127 -135 344 305 14 50 chr17 80378076 80378217 -9126336 - MIR3 SINE MIR -72 136 1 699 209 60 28 chr17 80378250 80378432 -9126121 - MER5A DNA MER1_type 0 189 2 477 129 0 0 chr17 80378676 80378746 -9125807 + FLAM_A SINE Alu 56 125 -17 2072 98 16 20 chr17 80379779 80380084 -9124469 + AluSx SINE Alu 1 304 -8 184 244 22 0 chr17 80381210 80381255 -9123298 - L2 LINE L2 0 3272 3227 213 233 23 81 chr17 80381535 80381621 -9122932 - L3 LINE CR1 -34 1543 1463 2020 123 0 29 chr17 80382040 80382348 -9122205 - AluSq SINE Alu -12 301 3 951 207 47 116 chr17 80382673 80382780 -9121773 + MLT1C LTR MaLR 60 173 -294 1990 118 16 16 chr17 80382780 80383084 -9121469 + AluSx SINE Alu 1 304 -8 951 207 47 116 chr17 80383084 80383406 -9121147 + MLT1C LTR MaLR 173 459 -8 213 273 18 0 chr17 80383672 80383727 -9120826 - MIR SINE MIR -130 132 77 221 352 19 38 chr17 80383992 80384151 -9120402 - L3 LINE CR1 -313 1264 1109 1997 149 0 0 chr17 80386865 80387166 -9117387 + AluSx SINE Alu 1 301 -11 293 274 48 0 chr17 80387410 80387494 -9117059 - MER5C DNA MER1_type 0 324 237 280 274 12 12 chr17 80387495 80387579 -9116974 - L1MB7 LINE L1 -16 6168 6085 25 31 0 0 chr17 80387698 80387730 -9116823 + GC_rich Low_complexity Low_complexity 1 32 0 312 123 15 15 chr17 80387754 80387819 -9116734 + Alu SINE Alu 238 302 0 237 370 98 16 chr17 80387841 80387969 -9116584 + MIR SINE MIR 1 150 -112 2123 116 3 0 chr17 80387969 80388271 -9116282 - AluSx SINE Alu -9 303 1 237 370 98 16 chr17 80388271 80388326 -9116227 + MIR SINE MIR 150 199 -63 1764 175 14 0 chr17 80389027 80389313 -9115240 - AluJb SINE Alu -21 291 2 243 0 0 0 chr17 80389762 80389789 -9114764 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 612 205 43 54 chr17 80389846 80390031 -9114522 + L1MB5 LINE L1 5992 6174 0 1548 164 39 58 chr17 80390038 80390378 -9114175 + AluJo SINE Alu 1 315 0 1393 158 0 67 chr17 80390378 80390568 -9113985 + AluJb SINE Alu 45 211 -101 2178 106 0 3 chr17 80390568 80390869 -9113684 + AluSq SINE Alu 1 300 -13 1393 158 0 67 chr17 80390869 80390963 -9113590 + AluJb SINE Alu 211 310 -2 2311 81 3 0 chr17 80391116 80391424 -9113129 - AluY SINE Alu -2 309 1 192 283 0 0 chr17 80392203 80392256 -9112297 - L2 LINE L2 0 3313 3261 23 78 0 0 chr17 80392304 80392355 -9112198 + AT_rich Low_complexity Low_complexity 1 51 0 243 0 0 0 chr17 80392682 80392709 -9111844 + (GA)n Simple_repeat Simple_repeat 2 28 0 1824 149 7 0 chr17 80392725 80393058 -9111495 + AluSx SINE Alu 1 335 0 447 197 129 77 chr17 80393075 80393145 -9111408 - MER106B DNA MER1_type -2 1057 992 2004 108 7 14 chr17 80393145 80393441 -9111112 - AluSx SINE Alu -18 294 1 447 197 129 77 chr17 80393441 80393548 -9111005 - MER106B DNA MER1_type -67 992 44 180 0 0 0 chr17 80394217 80394237 -9110316 + (TG)n Simple_repeat Simple_repeat 1 20 0 673 225 28 92 chr17 80394253 80394388 -9110165 + L1MC4a LINE L1 5691 5804 -2004 2305 88 0 0 chr17 80394388 80394683 -9109870 + AluSx SINE Alu 3 297 -15 673 225 28 92 chr17 80394683 80394796 -9109757 + L1MC4a LINE L1 5804 5923 -1885 1860 161 24 9 chr17 80394803 80395138 -9109415 + MER47A DNA MER2_type 27 366 0 219 218 0 0 chr17 80395140 80395195 -9109358 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 574 179 0 18 chr17 80395217 80395329 -9109224 + MLT1C LTR MaLR 357 466 -1 1977 121 28 0 chr17 80395954 80396244 -9108309 + AluSx SINE Alu 1 298 -14 2088 116 0 0 chr17 80396742 80397026 -9107527 + AluSx SINE Alu 1 284 -28 2182 109 0 10 chr17 80397857 80398169 -9106384 - AluSq SINE Alu -4 309 1 996 230 52 23 chr17 80398503 80398573 -9105980 - L1M4 LINE L1 -2492 3654 3588 2006 128 0 3 chr17 80398573 80398870 -9105683 - AluSx SINE Alu -16 296 1 996 230 52 23 chr17 80398870 80399108 -9105445 - L1M4 LINE L1 -2558 3588 3337 1858 150 29 13 chr17 80399110 80399417 -9105136 - AluJb SINE Alu 0 312 1 1606 204 16 39 chr17 80399419 80399534 -9105019 - L1M4 LINE L1 -3372 2774 2658 2387 56 0 13 chr17 80399534 80399838 -9104715 - AluY SINE Alu -11 300 1 1606 204 16 39 chr17 80399838 80400158 -9104395 - L1M4 LINE L1 -3488 2658 2349 1152 136 12 0 chr17 80400309 80400478 -9104075 + FRAM SINE Alu 1 165 -11 2082 123 0 19 chr17 80400942 80401252 -9103301 + AluSx SINE Alu 1 304 -8 1777 166 0 26 chr17 80401669 80401976 -9102577 + AluJb SINE Alu 1 299 -13 22 35 0 0 chr17 80402843 80402872 -9101681 + AT_rich Low_complexity Low_complexity 1 29 0 394 89 18 0 chr17 80402872 80402928 -9101625 - MER66B LTR ERV1 -135 351 295 2284 80 6 10 chr17 80402947 80403259 -9101294 - AluSx SINE Alu -1 311 1 996 230 52 23 chr17 80403593 80403663 -9100890 - L1M4 LINE L1 -2492 4152 4086 2006 128 0 3 chr17 80403663 80403960 -9100593 - AluSx SINE Alu -16 296 1 996 230 52 23 chr17 80403960 80404198 -9100355 - L1M4 LINE L1 -2558 4086 3835 1858 150 29 13 chr17 80404200 80404507 -9100046 - AluJb SINE Alu 0 312 1 2038 207 32 30 chr17 80404509 80404624 -9099929 - L1M4 LINE L1 -3372 3272 3159 2372 59 0 13 chr17 80404624 80404928 -9099625 - AluY SINE Alu -11 300 1 2038 207 32 30 chr17 80404928 80405349 -9099204 - L1M4 LINE L1 -3485 3159 2735 1221 124 0 0 chr17 80405351 80405529 -9099024 + AluSg/x SINE Alu 133 310 0 1952 121 11 4 chr17 80405575 80405876 -9098677 - AluSx SINE Alu 0 303 1 569 185 95 0 chr17 80405883 80406092 -9098461 - L1M4 LINE L1 -3929 2715 2488 2034 128 3 22 chr17 80406092 80406405 -9098148 - AluJo SINE Alu -1 311 5 4400 184 49 56 chr17 80406420 80406910 -9097643 - L1M4 LINE L1 -4832 1710 1218 1712 155 3 24 chr17 80406910 80407207 -9097346 + AluSq SINE Alu 5 295 -18 4400 184 49 56 chr17 80407207 80407954 -9096599 - L1M4 LINE L1 -5324 1218 549 731 252 0 0 chr17 80407987 80408118 -9096435 + FLAM_C SINE Alu 2 132 -1 445 131 24 0 chr17 80408118 80408202 -9096351 + GA-rich Low_complexity Low_complexity 1 86 0 570 152 121 0 chr17 80408212 80408311 -9096242 - FLAM_C SINE Alu -31 112 2 2274 225 42 22 chr17 80408311 80408857 -9095696 - L1M4 LINE L1 -5978 564 8 1217 92 0 0 chr17 80408877 80409041 -9095512 - AluY SINE Alu -9 302 139 937 209 77 8 chr17 80409300 80409535 -9095018 - AluSg SINE Alu -59 251 1 987 139 0 30 chr17 80410137 80410302 -9094251 + AluSg/x SINE Alu 135 294 -15 3431 157 23 43 chr17 80410307 80410552 -9094001 - L1MC1 LINE L1 -18 6315 6067 738 118 30 44 chr17 80410552 80410687 -9093866 + FLAM_C SINE Alu 1 133 0 3431 157 23 43 chr17 80410687 80410793 -9093760 - L1MC1 LINE L1 -266 6067 5960 2291 92 3 0 chr17 80410793 80411098 -9093455 - AluSq SINE Alu -7 306 1 3431 157 23 43 chr17 80411098 80411396 -9093157 - L1MC1 LINE L1 -373 5960 5678 307 287 43 9 chr17 80411591 80411706 -9092847 - MER5A DNA MER1_type -70 119 1 1229 301 87 32 chr17 80411849 80412537 -9092016 - L3 LINE CR1 -192 1385 660 2245 110 0 0 chr17 80412665 80412975 -9091578 + AluSx SINE Alu 3 312 0 283 203 43 14 chr17 80413013 80413082 -9091471 + MER5A DNA MER1_type 2 72 -117 338 344 54 36 chr17 80413246 80413470 -9091083 - L3 LINE CR1 -984 593 366 188 222 96 91 chr17 80413611 80413809 -9090744 + L2 LINE L2 2848 3046 -226 2216 102 7 0 chr17 80413869 80414174 -9090379 - AluSx SINE Alu -5 307 1 300 143 0 0 chr17 80414450 80414506 -9090047 + (TG)n Simple_repeat Simple_repeat 2 57 0 1257 142 119 4 chr17 80414508 80414761 -9089792 - AluJo SINE Alu -30 282 1 591 198 0 0 chr17 80415357 80415458 -9089095 + AluJ/FLAM SINE Alu 2 102 -210 1582 166 12 66 chr17 80415465 80415784 -9088769 + AluJb SINE Alu 3 304 -8 1804 146 7 27 chr17 80417793 80418094 -9086459 + AluJo SINE Alu 2 296 -16 388 326 0 30 chr17 80418393 80418525 -9086028 + MER5A DNA MER1_type 22 149 -40 692 189 0 39 chr17 80418743 80418870 -9085683 + FLAM_A SINE Alu 5 126 -7 854 276 90 42 chr17 80418947 80419379 -9085174 + L1ME3 LINE L1 5616 6068 -94 1214 112 0 0 chr17 80419473 80419643 -9084910 - AluSc SINE Alu -8 301 132 1854 127 55 7 chr17 80419643 80419935 -9084618 - AluSx SINE Alu -6 306 1 812 130 0 78 chr17 80420336 80420490 -9084063 - FLAM_C SINE Alu 0 143 2 294 278 0 52 chr17 80420564 80420679 -9083874 + G-rich Low_complexity Low_complexity 2 110 0 210 292 21 31 chr17 80421922 80422018 -9082535 - MIR SINE MIR -10 252 158 180 266 40 102 chr17 80422014 80422191 -9082362 - MIR3 SINE MIR -40 168 3 * 279 258 97 0 chr17 80422813 80422906 -9081647 - MIR SINE MIR -122 140 39 324 0 0 0 chr17 80423676 80423712 -9080841 + (CA)n Simple_repeat Simple_repeat 2 37 0 244 152 0 76 chr17 80424982 80425061 -9079492 + (CCCCG)n Simple_repeat Simple_repeat 3 75 0 228 322 68 49 chr17 80425397 80425602 -9078951 - L2 LINE L2 -48 3224 3016 316 183 134 12 chr17 80425670 80425752 -9078801 - L2 LINE L2 -7 3306 3215 325 233 214 0 chr17 80426371 80426474 -9078079 - L2 LINE L2 -6 3307 3183 2113 126 3 0 chr17 80428349 80428659 -9075894 - AluSq SINE Alu -2 311 1 325 283 122 21 chr17 80428978 80429323 -9075230 - LTR33 LTR ERVL -8 513 125 200 226 0 38 chr17 80430509 80430562 -9073991 + G-rich Low_complexity Low_complexity 1 51 0 2148 118 3 0 chr17 80430600 80430906 -9073647 - AluSx SINE Alu -5 307 1 663 280 33 0 chr17 80431258 80431440 -9073113 - MIR SINE MIR -16 246 59 227 341 122 8 chr17 80431557 80431680 -9072873 - L2 LINE L2 0 3272 3136 1693 68 0 0 chr17 80431901 80432107 -9072446 + AluSx SINE Alu 1 206 -106 242 67 0 0 chr17 80432108 80432138 -9072415 + AluSx SINE Alu 253 282 -20 219 36 0 0 chr17 80432144 80432172 -9072381 + (TAA)n Simple_repeat Simple_repeat 3 30 0 532 203 47 151 chr17 80432588 80432621 -9071932 + MER63A DNA MER1_type 1 36 -1652 1962 110 40 3 chr17 80432621 80432922 -9071631 - AluSq SINE Alu -1 312 1 532 203 47 151 chr17 80432922 80433120 -9071433 + MER63A DNA MER1_type 36 208 -2 255 288 0 0 chr17 80434087 80434153 -9070400 + (TGAA)n Simple_repeat Simple_repeat 2 67 0 459 230 10 0 chr17 80434332 80434432 -9070121 + MLT1J LTR MaLR 81 181 -330 1590 195 117 51 chr17 80434447 80434841 -9069712 - MSTC LTR MaLR -8 420 1 505 195 180 8 chr17 80434841 80434969 -9069584 + MLT1J LTR MaLR 222 371 -140 461 181 48 16 chr17 80435396 80435511 -9069042 + MLT1E1 LTR MaLR 6 131 -462 1391 158 0 9 chr17 80435511 80435732 -9068821 + AluJb SINE Alu 1 219 -93 1159 207 13 21 chr17 80435773 80435888 -9068665 + MLT1E1 LTR MaLR 137 251 -403 438 36 0 0 chr17 80435888 80435944 -9068609 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 1819 146 3 3 chr17 80435948 80436236 -9068317 - AluSx SINE Alu -24 288 1 1159 207 13 21 chr17 80436236 80436567 -9067986 + MLT1E1 LTR MaLR 254 644 -10 967 178 56 61 chr17 80437376 80437589 -9066964 + MER20 DNA MER1_type 5 216 -3 2040 134 0 3 chr17 80437604 80437911 -9066642 - AluSq SINE Alu -7 306 1 685 206 0 12 chr17 80438000 80438170 -9066383 + (CA)n Simple_repeat Simple_repeat 2 169 0 247 331 22 22 chr17 80438172 80438308 -9066245 + L2 LINE L2 2963 3098 -174 495 240 70 50 chr17 80438352 80438594 -9065959 + L1ME3A LINE L1 5924 6170 0 1942 91 0 4 chr17 80439069 80439312 -9065241 - AluY SINE Alu -17 294 53 884 206 78 0 chr17 80439496 80439700 -9064853 + MER5C DNA MER1_type 5 224 -100 225 146 0 0 chr17 80490834 80490882 -9013671 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 1714 160 4 0 chr17 80491847 80492166 -9012387 - AluJb SINE Alu 0 322 3 1998 118 0 23 chr17 80495681 80495986 -9008567 + AluSq SINE Alu 1 298 -15 1947 167 22 19 chr17 80496229 80496594 -9007959 - L1MB1 LINE L1 -13 6155 5790 2583 153 83 10 chr17 80496595 80496660 -9007893 + L1MA5 LINE L1 5766 5825 -475 2263 90 0 0 chr17 80496660 80496959 -9007594 + AluSc SINE Alu 1 299 -10 2583 153 83 10 chr17 80496959 80497389 -9007164 + L1MA5 LINE L1 5825 6297 -3 2338 164 27 133 chr17 80497486 80497501 -9007052 - L1MB1 LINE L1 -365 5806 5791 2399 111 19 30 chr17 80497501 80497869 -9006684 - THE1B LTR MaLR 0 364 1 2338 164 27 133 chr17 80497869 80498604 -9005949 - L1MB1 LINE L1 -380 5791 5216 1052 195 0 6 chr17 80498604 80498778 -9005775 + FAM SINE Alu 1 173 -2 2338 164 27 133 chr17 80498778 80499070 -9005483 - L1MB1 LINE L1 -955 5216 4894 248 186 69 88 chr17 80499513 80499615 -9004938 - MLT1L LTR MaLR -348 267 168 2277 159 39 24 chr17 80500091 80500583 -9003970 + MLT2A2 LTR ERVL 3 516 -38 450 0 0 0 chr17 80500583 80500633 -9003920 + (TA)n Simple_repeat Simple_repeat 2 51 0 2277 159 39 24 chr17 80500633 80500673 -9003880 + MLT2A2 LTR ERVL 516 554 0 405 191 0 93 chr17 80501531 80501725 -9002828 + (CACAT)n Simple_repeat Simple_repeat 3 178 0 306 110 22 82 chr17 80501767 80501949 -9002604 + (CACAT)n Simple_repeat Simple_repeat 3 173 0 269 183 0 77 chr17 80501967 80502071 -9002482 + (CACAT)n Simple_repeat Simple_repeat 5 100 0 236 145 16 71 chr17 80502093 80502351 -9002202 + (CACAT)n Simple_repeat Simple_repeat 1 243 0 435 78 18 96 chr17 80502377 80502543 -9002010 + (CACAT)n Simple_repeat Simple_repeat 5 157 0 610 159 37 19 chr17 80502687 80502794 -9001759 + FLAM_C SINE Alu 24 132 -11 378 0 0 0 chr17 80502795 80502837 -9001716 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 182 371 67 0 chr17 80503712 80503817 -9000736 + MIR3 SINE MIR 90 201 -7 15840 149 22 33 chr17 80504411 80505303 -8999250 + L1M1 LINE L1 2077 2978 -4691 1572 120 8 8 chr17 80505303 80505553 -8999000 + AluSx SINE Alu 63 312 0 15840 149 22 33 chr17 80505553 80505769 -8998784 + L1M1 LINE L1 2978 3195 -4474 1724 174 0 3 chr17 80505769 80506063 -8998490 - AluJb SINE Alu -19 293 1 15840 149 22 33 chr17 80506063 80509343 -8995210 + L1M1 LINE L1 3195 6511 -1158 1414 191 3 27 chr17 80509343 80509642 -8994911 + AluJb SINE Alu 1 292 -20 15840 149 22 33 chr17 80509642 80510093 -8994460 + L1M1 LINE L1 6511 6877 -792 1294 176 194 31 chr17 80510093 80510480 -8994073 - LTR7 LTR ERV1 0 450 1 15840 149 22 33 chr17 80510480 80510530 -8994023 + L1M1 LINE L1 6877 6926 -743 3284 126 8 2 chr17 80510530 80511039 -8993514 - HERVH LTR ERV1 -45 7668 7157 1636 137 0 8 chr17 80511032 80511295 -8993258 - HERVH LTR ERV1 -1697 6016 5756 * 7070 126 34 56 chr17 80511285 80512508 -8992045 - HERVH LTR ERV1 -3161 4552 3357 5025 118 1 9 chr17 80512508 80513259 -8991294 - HERVH LTR ERV1 -4883 2830 2086 271 85 21 0 chr17 80513259 80513306 -8991247 + L1MA3 LINE L1 6258 6305 0 420 316 89 39 chr17 80513451 80513733 -8990820 + L1ME4a LINE L1 4862 5157 -989 270 264 220 36 chr17 80513925 80514175 -8990378 + L1ME4a LINE L1 5254 5549 -2259 1503 135 61 55 chr17 80514180 80514218 -8990335 + LTR18B LTR ERVL 1 37 -577 1928 87 73 37 chr17 80514218 80514518 -8990035 + AluSx SINE Alu 1 311 -1 1503 135 61 55 chr17 80514518 80514837 -8989716 + LTR18B LTR ERVL 37 477 -137 2180 45 15 0 chr17 80514837 80515104 -8989449 + L1PA6 LINE L1 5878 6148 -6 1503 135 61 55 chr17 80515104 80515243 -8989310 + LTR18B LTR ERVL 477 614 0 262 250 50 50 chr17 80515254 80515354 -8989199 + L1ME4a LINE L1 5561 5660 -2148 2388 80 0 0 chr17 80515360 80515662 -8988891 + AluSg SINE Alu 1 302 -8 537 294 53 70 chr17 80515814 80516188 -8988365 + L2 LINE L2 2244 2611 -703 862 325 78 32 chr17 80516212 80516726 -8987827 + L2 LINE L2 2777 3313 0 2067 112 3 0 chr17 80516858 80517145 -8987408 - AluSx SINE Alu -22 290 3 22 35 0 0 chr17 80517153 80517182 -8987371 + AT_rich Low_complexity Low_complexity 1 29 0 1189 116 0 0 chr17 80517331 80517503 -8987050 - AluSg/x SINE Alu -9 303 132 2154 108 0 10 chr17 80517588 80517902 -8986651 - AluSx SINE Alu -1 311 1 491 236 136 15 chr17 80518092 80518291 -8986262 + L1ME4a LINE L1 5633 5855 -266 305 239 45 57 chr17 80518307 80518395 -8986158 + L1ME4a LINE L1 6035 6121 0 2190 101 3 0 chr17 80518395 80518693 -8985860 - AluSx SINE Alu -13 299 1 249 33 0 0 chr17 80519171 80519201 -8985352 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 1619 161 6 57 chr17 80519338 80519453 -8985100 + AluJo SINE Alu 1 120 -192 378 0 0 0 chr17 80519453 80519495 -8985058 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 1619 161 6 57 chr17 80519495 80519695 -8984858 + AluJo SINE Alu 120 300 -12 180 0 0 0 chr17 80520416 80520436 -8984117 + (TA)n Simple_repeat Simple_repeat 2 21 0 1965 129 17 0 chr17 80520436 80520723 -8983830 - AluSx SINE Alu -18 294 3 2349 62 10 3 chr17 80520928 80521235 -8983318 + AluY SINE Alu 1 309 -2 252 241 19 0 chr17 80521254 80521308 -8983245 + GA-rich Low_complexity Low_complexity 4 58 0 502 271 8 0 chr17 80521711 80521840 -8982713 + FLAM_A SINE Alu 1 130 -3 1941 129 17 0 chr17 80521842 80522137 -8982416 + AluSx SINE Alu 1 300 -12 245 306 27 27 chr17 80522201 80522312 -8982241 - MIR SINE MIR -71 137 27 457 229 0 14 chr17 80522609 80522753 -8981800 + CT-rich Low_complexity Low_complexity 2 143 0 762 295 157 20 chr17 80522753 80523140 -8981413 - L1ME LINE L1 -433 5729 5397 2006 53 0 0 chr17 80523140 80523385 -8981168 - AluY SINE Alu -9 302 58 762 295 157 20 chr17 80523385 80524205 -8980348 - L1ME LINE L1 -765 5397 4691 2175 96 7 7 chr17 80524205 80524507 -8980046 - AluSq SINE Alu -11 302 1 762 295 157 20 chr17 80524507 80524951 -8979602 - L1ME LINE L1 -1471 4691 3850 312 193 0 18 chr17 80524953 80525010 -8979543 - AluS SINE Alu -14 286 231 3503 204 69 76 chr17 80525010 80525336 -8979217 - HUERS-P3 LTR ERV1 -5907 1530 1203 2168 126 0 0 chr17 80525336 80525645 -8978908 + AluSq SINE Alu 1 309 -4 3503 204 69 76 chr17 80525645 80526051 -8978502 - HUERS-P3 LTR ERV1 -6234 1203 796 2457 55 0 10 chr17 80526051 80526363 -8978190 - AluY SINE Alu -2 309 1 3503 204 69 76 chr17 80526363 80527102 -8977451 - HUERS-P3 LTR ERV1 -6641 796 1 4206 108 42 5 chr17 80527102 80527723 -8976830 - LTR9B LTR ERV1 0 644 1 408 304 27 20 chr17 80527732 80527880 -8976673 - MIR SINE MIR -109 153 5 1724 155 10 7 chr17 80528604 80528894 -8975659 + AluJo SINE Alu 13 303 -9 468 0 0 0 chr17 80529104 80529156 -8975397 + (TG)n Simple_repeat Simple_repeat 2 53 0 2105 120 7 0 chr17 80529888 80530197 -8974356 - AluSx SINE Alu -1 311 1 22 0 0 0 chr17 80530546 80530568 -8973985 + AT_rich Low_complexity Low_complexity 1 22 0 1633 166 10 10 chr17 80530568 80530857 -8973696 - AluJo SINE Alu -23 289 1 216 336 66 33 chr17 80530860 80530982 -8973571 - MIR SINE MIR -69 193 68 1108 213 24 21 chr17 80531240 80531391 -8973162 - MLT1D LTR MaLR -6 499 357 3446 140 13 8 chr17 80531391 80531914 -8972639 - MER1A DNA MER1_type 0 527 2 1108 213 24 21 chr17 80531914 80532023 -8972530 - MLT1D LTR MaLR -148 357 250 715 217 7 0 chr17 80532068 80532211 -8972342 - MLT1D LTR MaLR -360 145 2 388 292 49 16 chr17 80532645 80532830 -8971723 - L2 LINE L2 -1003 2311 2121 737 219 75 59 chr17 80532834 80532973 -8971580 - MER63A DNA MER1_type -1483 205 61 2086 118 0 3 chr17 80532973 80533277 -8971276 - AluSx SINE Alu -9 303 1 737 219 75 59 chr17 80533277 80533324 -8971229 - MER63A DNA MER1_type -1627 61 16 225 146 0 0 chr17 80534067 80534115 -8970438 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 384 257 5 14 chr17 80534327 80534548 -8970005 + GA-rich Low_complexity Low_complexity 1 218 0 328 303 22 74 chr17 80534549 80534697 -8969856 + L1ME3 LINE L1 5733 5866 -296 1819 100 81 4 chr17 80534697 80534968 -8969585 + AluSg SINE Alu 3 294 -16 328 303 22 74 chr17 80534968 80535050 -8969503 + L1ME3 LINE L1 5866 5951 -211 708 191 8 0 chr17 80535136 80535262 -8969291 + FLAM_A SINE Alu 1 127 -6 217 324 103 63 chr17 80536922 80537302 -8967251 + L2 LINE L2 2878 3272 0 474 325 62 48 chr17 80537445 80537864 -8966689 + L2 LINE L2 2888 3312 -1 1227 318 50 28 chr17 80537915 80538635 -8965918 + ERVL LTR ERVL 1604 2339 -3425 237 285 90 21 chr17 80539395 80539539 -8965014 + L2 LINE L2 3160 3313 0 385 331 39 54 chr17 80539666 80540056 -8964497 + L2 LINE L2 2898 3281 -32 237 285 90 21 chr17 80540699 80540843 -8963710 + L2 LINE L2 3160 3313 0 385 331 39 54 chr17 80540965 80541355 -8963198 + L2 LINE L2 2898 3281 -32 321 247 21 0 chr17 80543011 80543104 -8961449 + (CA)n Simple_repeat Simple_repeat 2 96 0 510 188 0 24 chr17 80543797 80544053 -8960500 + (TG)n Simple_repeat Simple_repeat 1 249 0 191 311 67 44 chr17 80546320 80546455 -8958098 + L2 LINE L2 3176 3313 0 516 323 50 42 chr17 80546589 80546989 -8957564 + L2 LINE L2 2911 3313 0 1328 308 42 34 chr17 80547067 80547753 -8956800 + ERVL LTR ERVL 1649 2340 -3424 436 343 30 32 chr17 80548773 80549146 -8955407 + L2 LINE L2 2911 3282 -31 297 242 22 17 chr17 80549953 80550131 -8954422 + (CA)n Simple_repeat Simple_repeat 1 179 0 206 296 0 0 chr17 80550831 80550885 -8953668 + (TG)n Simple_repeat Simple_repeat 1 54 0 1518 205 101 86 chr17 80551742 80552396 -8952157 - MER4A LTR ERV1 0 664 1 840 200 0 0 chr17 80552469 80552614 -8951939 - FRAM SINE Alu -31 145 1 1012 99 0 0 chr17 80553164 80553295 -8951258 + AluSq/x SINE Alu 5 135 -177 2044 119 10 3 chr17 80553295 80553597 -8950956 + AluSx SINE Alu 1 304 -8 188 351 53 0 chr17 80553957 80554051 -8950502 + MIR SINE MIR 15 113 -149 351 261 17 17 chr17 80554178 80554293 -8950260 - L1ME3A LINE L1 0 6170 6056 1767 228 97 13 chr17 80554299 80554751 -8949802 + MLT1F LTR MaLR 53 542 0 421 320 114 19 chr17 80554805 80555164 -8949389 - L2 LINE L2 0 3313 2921 2097 121 39 12 chr17 80555280 80555612 -8948941 + THE1B LTR MaLR 1 341 -23 2044 125 0 0 chr17 80555623 80555904 -8948649 - AluSq SINE Alu -32 281 1 2728 210 20 2 chr17 80556569 80557111 -8947442 - L1MD2 LINE L1 -322 6037 5486 1498 206 29 20 chr17 80557111 80557547 -8947006 + LTR2B LTR ERV1 1 490 0 1768 229 20 44 chr17 80557606 80558087 -8946466 + MER74B LTR ERVL 134 604 -18 1575 163 64 7 chr17 80558087 80558370 -8946183 - AluJo SINE Alu -13 299 1 1768 229 20 44 chr17 80558370 80558389 -8946164 + MER74B LTR ERVL 604 622 0 2001 137 0 3 chr17 80558859 80559166 -8945387 - AluJb SINE Alu -6 306 1 247 277 46 87 chr17 80560082 80560277 -8944276 + LTR16C LTR ERVL 1 187 -304 677 228 43 56 chr17 80560309 80560541 -8944012 + LTR16C LTR ERVL 263 491 0 309 284 47 81 chr17 80560684 80560920 -8943633 - L1MEd LINE L1 -4939 1180 953 188 345 80 44 chr17 80560942 80561038 -8943515 + L2 LINE L2 3156 3259 -13 2197 58 0 24 chr17 80561038 80561349 -8943204 + AluY SINE Alu 1 304 0 188 345 80 44 chr17 80561349 80561364 -8943189 + L2 LINE L2 3259 3272 0 288 245 0 0 chr17 80561957 80562100 -8942453 + (CA)n Simple_repeat Simple_repeat 1 143 0 561 325 18 0 chr17 80562866 80563035 -8941518 + MIR SINE MIR 43 214 -48 274 224 53 0 chr17 80563044 80563120 -8941433 + MER116 DNA Mariner 1 80 0 343 304 95 30 chr17 80563122 80563290 -8941263 + L1M4 LINE L1 3259 3437 -2709 1304 143 0 10 chr17 80563315 80563524 -8941029 + AluJo SINE Alu 87 293 -19 1984 135 0 10 chr17 80563526 80563829 -8940724 + AluJb SINE Alu 1 300 -12 300 120 0 0 chr17 80564041 80564091 -8940462 + (TC)n Simple_repeat Simple_repeat 1 50 0 452 108 0 14 chr17 80564639 80564713 -8939840 + Alu SINE Alu 239 311 0 862 136 29 0 chr17 80564785 80564925 -8939628 - FRAM SINE Alu -11 165 22 2105 124 3 0 chr17 80566039 80566338 -8938215 - AluSx SINE Alu -12 300 1 466 325 47 14 chr17 80566675 80566887 -8937666 + MIR SINE MIR 34 252 -10 279 0 0 0 chr17 80567745 80567776 -8936777 + (TA)n Simple_repeat Simple_repeat 1 31 0 2015 120 14 0 chr17 80567778 80568069 -8936484 - AluSx SINE Alu -11 301 7 242 316 167 20 chr17 80568076 80568419 -8936134 + HAL1 LINE L1 1050 1444 -1059 1957 131 13 13 chr17 80568419 80568724 -8935829 + AluSx SINE Alu 1 305 -7 257 321 18 27 chr17 80568783 80568895 -8935658 - MIR SINE MIR -71 137 27 2354 93 0 0 chr17 80569023 80569335 -8935218 - AluSx SINE Alu 0 312 1 457 287 35 17 chr17 80569985 80570159 -8934394 + L1MC4 LINE L1 7865 8041 -1 1945 137 0 7 chr17 80570304 80570616 -8933937 + AluSx SINE Alu 1 310 0 270 116 0 0 chr17 80570737 80570780 -8933773 + (TTTC)n Simple_repeat Simple_repeat 3 45 0 2127 134 0 6 chr17 80570841 80571155 -8933398 + AluSx SINE Alu 1 312 0 1148 220 8 8 chr17 80571660 80571919 -8932634 + AluJo SINE Alu 1 259 -53 2239 68 17 0 chr17 80572558 80572850 -8931703 + AluSx SINE Alu 1 297 -15 2089 130 0 0 chr17 80573207 80573506 -8931047 - AluSx SINE Alu -13 299 1 531 272 52 47 chr17 80575500 80575603 -8928950 - MIR SINE MIR -11 251 150 2260 123 30 38 chr17 80575603 80575970 -8928583 - THE1B LTR MaLR 0 364 1 531 272 52 47 chr17 80575970 80576103 -8928450 - MIR SINE MIR -112 150 15 1538 241 91 84 chr17 80576244 80576944 -8927609 - MER21B LTR ERV1 -149 714 10 688 304 77 27 chr17 80577015 80577055 -8927498 + L1MC4a LINE L1 5626 5663 -2145 471 256 39 78 chr17 80577055 80577235 -8927318 - MER69A DNA AcHobo -4 173 1 688 304 77 27 chr17 80577235 80577493 -8927060 + L1MC4a LINE L1 5663 5939 -1869 1745 131 60 0 chr17 80577688 80577971 -8926582 + AluJo SINE Alu 13 312 0 785 189 0 8 chr17 80578412 80578544 -8926009 + FLAM_A SINE Alu 1 131 -2 475 259 31 83 chr17 80579642 80579822 -8924731 - L1ME4a LINE L1 -16 6105 5944 1645 135 68 40 chr17 80579822 80580118 -8924435 - AluJb SINE Alu -8 304 1 475 259 31 83 chr17 80580118 80580226 -8924327 - L1ME4a LINE L1 -177 5944 5832 396 279 18 0 chr17 80580462 80580573 -8923980 - L2 LINE L2 0 3272 3160 2255 109 0 3 chr17 80581321 80581634 -8922919 - AluSx SINE Alu 0 312 1 236 279 15 0 chr17 80581650 80581718 -8922835 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 265 317 16 24 chr17 80582830 80582953 -8921600 + L3 LINE CR1 1406 1527 -50 204 40 0 0 chr17 80583263 80583288 -8921265 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 1991 137 20 0 chr17 80583288 80583594 -8920959 - AluSx SINE Alu 0 312 1 2156 113 7 0 chr17 80583931 80584241 -8920312 - AluSx SINE Alu 0 312 1 263 221 87 58 chr17 80585181 80585285 -8919268 - MIR SINE MIR -33 175 69 1824 139 21 0 chr17 80585554 80585835 -8918718 - AluJo SINE Alu -24 288 2 276 215 77 0 chr17 80585963 80586028 -8918525 - FLAM_A SINE Alu -5 128 59 1563 166 41 0 chr17 80586800 80587071 -8917482 - AluJo SINE Alu -30 282 1 316 229 156 0 chr17 80587388 80587484 -8917069 - L1ME4a LINE L1 -2121 5687 5577 2040 136 10 0 chr17 80587513 80587822 -8916731 + AluSx SINE Alu 1 312 0 1649 156 6 44 chr17 80587832 80588152 -8916401 - AluJb SINE Alu -4 308 1 2177 113 60 28 chr17 80588228 80588581 -8915972 - THE1B LTR MaLR 0 364 1 11502 81 6 11 chr17 80588581 80590168 -8914385 - THE1B-int LTR MaLR 0 1580 1 2245 121 16 25 chr17 80590171 80590535 -8914018 - THE1B LTR MaLR -3 361 1 292 360 0 0 chr17 80590542 80590689 -8913864 + L1M4 LINE L1 4437 4583 -1563 1174 71 14 0 chr17 80590690 80590831 -8913722 + AluSp SINE Alu 1 143 -170 1639 87 4 0 chr17 80590837 80591066 -8913487 + THE1-int LTR MaLR 236 465 -1115 322 214 97 39 chr17 80591068 80591171 -8913382 - L1M4 LINE L1 -1464 4682 4574 1126 122 0 0 chr17 80591171 80591319 -8913234 - AluSp SINE Alu -20 293 146 260 166 0 0 chr17 80591319 80591368 -8913185 - FRAM/FAM SINE Alu -99 76 33 273 57 0 0 chr17 80591682 80591717 -8912836 + (TG)n Simple_repeat Simple_repeat 2 36 0 336 258 7 10 chr17 80592138 80592438 -8912115 + (CA)n Simple_repeat Simple_repeat 1 298 0 510 70 0 0 chr17 80593274 80593345 -8911208 + (TGGA)n Simple_repeat Simple_repeat 4 74 0 486 122 31 0 chr17 80594025 80594123 -8910430 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 2283 107 3 3 chr17 80594192 80594492 -8910061 + AluSx SINE Alu 1 300 -12 205 162 0 0 chr17 80594625 80594662 -8909891 + (CGGG)n Simple_repeat Simple_repeat 3 39 0 1002 157 6 6 chr17 80594662 80594834 -8909719 + MER20 DNA MER1_type 36 207 -12 612 154 135 39 chr17 80596391 80596547 -8908006 - MER45A DNA AcHobo -3 175 5 563 135 35 35 chr17 80597028 80597344 -8907209 + (TG)n Simple_repeat Simple_repeat 1 316 0 318 164 36 18 chr17 80597360 80597470 -8907083 + (TG)n Simple_repeat Simple_repeat 2 113 0 482 124 39 34 chr17 80597487 80597665 -8906888 + (TG)n Simple_repeat Simple_repeat 1 179 0 453 148 61 7 chr17 80597677 80597981 -8906572 + (TG)n Simple_repeat Simple_repeat 1 320 0 238 327 106 0 chr17 80598439 80598543 -8906010 - MLT1I LTR MaLR -232 177 63 396 306 0 0 chr17 80599972 80600080 -8904473 + MIR SINE MIR 47 154 -108 1768 195 32 35 chr17 80600504 80600682 -8903871 + MLT1A2 LTR MaLR 1 178 -196 2021 185 8 6 chr17 80600682 80601044 -8903509 - MLT1A1 LTR MaLR -2 363 1 1768 195 32 35 chr17 80601044 80601240 -8903313 + MLT1A2 LTR MaLR 178 374 0 2458 188 44 102 chr17 80602707 80603299 -8901254 + MER77 LTR ERV1 1 555 -50 1856 205 74 49 chr17 80603299 80603691 -8900862 - MER87 LTR ERV1 0 541 131 2407 112 0 0 chr17 80603691 80604003 -8900550 + AluSx SINE Alu 1 312 0 1856 205 74 49 chr17 80604003 80604136 -8900417 - MER87 LTR ERV1 -410 131 3 2458 188 44 102 chr17 80604136 80604183 -8900370 + MER77 LTR ERV1 555 603 -2 2378 109 0 3 chr17 80604379 80604690 -8899863 + AluSx SINE Alu 1 310 -2 2320 37 52 0 chr17 80605622 80605916 -8898637 - AluY SINE Alu 0 308 1 182 260 40 73 chr17 80605917 80606067 -8898486 + L2 LINE L2 2347 2491 -823 1986 111 4 4 chr17 80606244 80606514 -8898039 + AluSx SINE Alu 43 312 0 307 316 93 7 chr17 80606520 80606659 -8897894 + HAL1b LINE L1 777 927 -421 208 153 0 136 chr17 80606948 80606990 -8897563 + L2 LINE L2 3220 3253 -19 2151 145 0 0 chr17 80606990 80607301 -8897252 - AluSx SINE Alu 0 312 2 208 153 0 136 chr17 80607301 80607317 -8897236 + L2 LINE L2 3253 3270 -2 1999 158 3 3 chr17 80608235 80608545 -8896008 + AluJb SINE Alu 2 311 -1 919 121 0 0 chr17 80609415 80609547 -8895006 + FLAM_C SINE Alu 1 132 -1 827 189 16 21 chr17 80610593 80610783 -8893770 + MER53 DNA DNA 1 189 0 274 326 8 16 chr17 80611630 80611759 -8892794 - L1ME2 LINE L1 -7 6157 6030 2006 178 2 45 chr17 80611792 80612191 -8892362 + MLT1B LTR MaLR 1 382 -8 1435 214 69 57 chr17 80612195 80612378 -8892175 - L1ME2 LINE L1 -199 5967 5788 1986 151 3 10 chr17 80612378 80612682 -8891871 - AluSx SINE Alu -10 302 1 1435 214 69 57 chr17 80612682 80612993 -8891560 - L1ME2 LINE L1 -378 5788 5467 2656 128 0 16 chr17 80612994 80613430 -8891123 + LTR3 LTR ERVK 1 429 0 13051 134 13 19 chr17 80613447 80615559 -8888994 + HERVK3 LTR ERVK 68 2165 -5078 1909 78 4 0 chr17 80615561 80615791 -8888762 + AluSp SINE Alu 67 297 -16 1295 273 48 21 chr17 80615823 80616340 -8888213 - L1M4 LINE L1 -2612 3534 3004 2484 152 31 0 chr17 80616593 80617008 -8887545 - MSTC LTR MaLR 0 428 1 579 234 55 7 chr17 80618541 80618638 -8885915 + MIR SINE MIR 14 122 -140 2041 132 33 30 chr17 80618638 80619001 -8885552 + THE1B LTR MaLR 1 364 0 579 234 55 7 chr17 80619001 80619048 -8885505 + MIR SINE MIR 122 165 -97 228 86 0 0 chr17 80619058 80619093 -8885460 + (TTA)n Simple_repeat Simple_repeat 1 35 0 1392 196 34 21 chr17 80619422 80619713 -8884840 + AluJo SINE Alu 1 295 -17 908 136 0 0 chr17 80619758 80619883 -8884670 + FLAM_C SINE Alu 1 125 -18 420 37 0 0 chr17 80619883 80619937 -8884616 + (TAA)n Simple_repeat Simple_repeat 2 55 0 1375 216 16 3 chr17 80620110 80620425 -8884128 + L1MB7 LINE L1 5566 5884 -300 377 55 0 0 chr17 80620425 80620480 -8884073 + Alu SINE Alu 246 300 -2 187 391 0 0 chr17 80620592 80620679 -8883874 + L2 LINE L2 3219 3305 -8 550 304 196 21 chr17 80621665 80622037 -8882516 - HAL1 LINE L1 -1291 1216 780 1991 104 34 0 chr17 80622062 80622331 -8882222 + AluSx SINE Alu 11 288 -24 3065 117 6 4 chr17 80622331 80622802 -8881751 + L1PB1 LINE L1 5680 6151 0 2164 116 0 3 chr17 80623082 80623390 -8881163 + AluSx SINE Alu 1 307 0 1169 328 72 18 chr17 80623561 80624029 -8880524 - HERV16 LTR ERVL -2073 2923 2425 1615 162 21 35 chr17 80624029 80624373 -8880180 - AluJo SINE Alu 0 342 3 1169 328 72 18 chr17 80624373 80624680 -8879873 - HERV16 LTR ERVL -2571 2425 2136 283 387 16 0 chr17 80624747 80624933 -8879620 - HERV16 LTR ERVL -4201 1563 1375 1763 158 51 21 chr17 80625050 80625386 -8879167 - L1MC1 LINE L1 0 6333 5988 2537 90 22 0 chr17 80625980 80626336 -8878217 - THE1B LTR MaLR 0 364 1 303 272 11 0 chr17 80626422 80626514 -8878039 + L1ME LINE L1 5679 5771 -399 326 145 0 0 chr17 80626540 80626602 -8877951 + L1MA10 LINE L1 6263 6324 -10 558 43 0 0 chr17 80626602 80626671 -8877882 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 2164 128 0 0 chr17 80626799 80627095 -8877458 + AluSx SINE Alu 14 309 -3 214 244 0 0 chr17 80628710 80628751 -8875802 + polypurine Low_complexity Low_complexity 4 44 0 1103 95 31 0 chr17 80628859 80629164 -8875389 + (TAGA)n Simple_repeat Simple_repeat 1 314 0 232 340 100 20 chr17 80629192 80629342 -8875211 - MER5B DNA MER1_type -8 170 9 266 170 0 0 chr17 80629729 80629776 -8874777 - L1MD2 LINE L1 -213 6146 6100 2449 60 3 0 chr17 80629887 80630201 -8874352 + AluSp SINE Alu 1 315 0 227 26 0 0 chr17 80630748 80630786 -8873767 + L1PA3 LINE L1 6115 6152 -3 263 283 0 6 chr17 80631016 80631189 -8873364 + (TG)n Simple_repeat Simple_repeat 2 173 0 1839 189 62 39 chr17 80633145 80633631 -8870922 - MLT1D LTR MaLR -8 497 1 812 167 0 0 chr17 80634784 80634910 -8869643 + FLAM_C SINE Alu 1 126 -17 238 269 39 15 chr17 80636278 80636408 -8868145 + (CAGGG)n Simple_repeat Simple_repeat 4 136 0 587 261 151 16 chr17 80636585 80636830 -8867723 - MLT1G LTR MaLR -190 400 123 337 230 148 77 chr17 80636814 80636906 -8867647 + MER106A DNA MER1_type 13 97 -139 * 789 110 0 0 chr17 80636906 80637024 -8867529 + (TAGA)n Simple_repeat Simple_repeat 4 121 0 337 230 148 77 chr17 80637024 80637140 -8867413 + MER106A DNA MER1_type 97 236 0 * 473 226 22 0 chr17 80637140 80637252 -8867301 - MLT1G LTR MaLR -430 165 10 187 299 72 31 chr17 80637267 80637364 -8867189 - MIR3 SINE MIR -45 163 63 1746 219 94 57 chr17 80637565 80638149 -8866404 + L1MD2 LINE L1 5751 6356 -3 247 323 111 0 chr17 80638522 80638621 -8865932 + L2 LINE L2 3204 3313 0 215 316 0 0 chr17 80638626 80638683 -8865870 + GA-rich Low_complexity Low_complexity 2 58 0 285 327 231 11 chr17 80638716 80639279 -8865274 + L2 LINE L2 1793 2479 -835 627 26 0 0 chr17 80640905 80640982 -8863571 + (TC)n Simple_repeat Simple_repeat 2 78 0 559 180 36 0 chr17 80640982 80641093 -8863460 - FLAM_A SINE Alu -18 115 1 2165 106 14 3 chr17 80641812 80642105 -8862448 - AluJb SINE Alu -16 296 1 2436 82 3 13 chr17 80643179 80643485 -8861068 - AluSp SINE Alu -10 303 1 521 188 109 0 chr17 80644312 80644413 -8860140 - MER81 DNA DNA -1 113 2 607 336 99 38 chr17 80644420 80644507 -8860046 - L2 LINE L2 -2182 1132 1052 1758 177 10 3 chr17 80644507 80644806 -8859747 + AluSx SINE Alu 1 301 -11 607 336 99 38 chr17 80644806 80645542 -8859011 - L2 LINE L2 -2262 1052 258 198 342 25 25 chr17 80648086 80648165 -8856388 + L3 LINE CR1 1495 1573 -4 276 30 0 0 chr17 80648312 80648345 -8856208 + (CA)n Simple_repeat Simple_repeat 1 33 0 2340 82 3 10 chr17 80648760 80648893 -8855660 + AluSc SINE Alu 1 133 -176 2038 135 7 0 chr17 80648893 80649197 -8855356 + AluSx SINE Alu 1 306 -6 2340 82 3 10 chr17 80649197 80649356 -8855197 + AluSc SINE Alu 133 291 -18 1763 139 35 0 chr17 80649516 80649775 -8854778 + AluSx SINE Alu 44 311 -1 190 387 13 0 chr17 80649802 80649877 -8854676 - L3 LINE CR1 0 1577 1502 939 166 0 0 chr17 80650668 80650807 -8853746 - FLAM_C SINE Alu -4 139 1 476 209 0 0 chr17 80651031 80651117 -8853436 + AluJ/FLAM SINE Alu 2 87 -225 2271 101 0 13 chr17 80651444 80651742 -8852811 - AluSx SINE Alu -18 294 1 303 149 15 60 chr17 80652065 80652132 -8852421 + L2 LINE L2 3209 3272 0 2715 23 3 0 chr17 80652783 80653083 -8851470 + AluY SINE Alu 1 301 -10 215 278 49 76 chr17 80653104 80653248 -8851305 + L2 LINE L2 2180 2319 -995 861 293 28 16 chr17 80653265 80653518 -8851035 + MIR SINE MIR 2 257 -5 1122 141 0 38 chr17 80653811 80653995 -8850558 + AluSc SINE Alu 133 309 0 1332 228 54 29 chr17 80654145 80654216 -8850337 - MSTD LTR MaLR 0 396 328 2093 154 0 0 chr17 80654216 80654521 -8850032 + AluSx SINE Alu 4 308 -4 1332 228 54 29 chr17 80654521 80654835 -8849718 - MSTD LTR MaLR -68 328 1 461 303 29 63 chr17 80655171 80655409 -8849144 + L1MEd LINE L1 130 359 -5760 1167 208 70 37 chr17 80655659 80655867 -8848686 + MER58B DNA MER1_type 34 256 -2164 3558 155 22 3 chr17 80655867 80656459 -8848094 - LTR26 LTR ERV1 0 603 1 1167 208 70 37 chr17 80656459 80656548 -8848005 + MER58B DNA MER1_type 256 341 0 610 236 4 129 chr17 80657500 80657733 -8846820 - MIR SINE MIR -40 222 19 1982 106 8 0 chr17 80657937 80658191 -8846362 + AluSx SINE Alu 1 256 -56 710 165 8 8 chr17 80658199 80658326 -8846227 + MLT1A2 LTR MaLR 248 374 0 376 238 49 120 chr17 80658328 80658559 -8845994 - L2 LINE L2 -1290 2024 1825 2072 144 3 6 chr17 80658559 80658872 -8845681 + AluSx SINE Alu 1 312 0 376 238 49 120 chr17 80658872 80658989 -8845564 - L2 LINE L2 -1489 1825 1701 293 337 62 30 chr17 80659196 80659600 -8844953 + L1ME LINE L1 5261 5677 -444 1854 154 22 0 chr17 80659662 80659934 -8844619 + AluSx SINE Alu 1 278 -34 581 0 0 14 chr17 80659938 80660008 -8844545 + (TAAAA)n Simple_repeat Simple_repeat 2 70 0 1441 164 86 8 chr17 80660942 80661186 -8843367 + AluJo SINE Alu 1 263 -49 2157 144 7 0 chr17 80661256 80661561 -8842992 - AluSx SINE Alu -5 307 1 2185 125 7 3 chr17 80662287 80662591 -8841962 + AluSq SINE Alu 1 305 -8 455 226 113 0 chr17 80662611 80662754 -8841799 - MLT1J2 LTR MaLR -7 426 282 1795 241 87 51 chr17 80662957 80663048 -8841505 + L1MDa LINE L1 24 110 -6430 2323 112 0 16 chr17 80663048 80663362 -8841191 + AluSx SINE Alu 1 309 -3 1795 241 87 51 chr17 80663362 80663846 -8840707 + L1MDa LINE L1 110 629 -5911 855 232 56 91 chr17 80663846 80664190 -8840363 + LTR56 LTR ERV1 1 327 -118 2115 141 3 0 chr17 80664190 80664488 -8840065 + AluSx SINE Alu 1 299 -13 855 232 56 91 chr17 80664488 80664604 -8839949 + LTR56 LTR ERV1 327 445 0 1795 241 87 51 chr17 80664604 80664708 -8839845 + L1MDa LINE L1 629 728 -5812 1828 112 91 42 chr17 80664832 80665118 -8839435 + AluSx SINE Alu 1 300 -12 2148 104 0 47 chr17 80665411 80665729 -8838824 - AluSx SINE Alu -5 307 5 288 302 160 22 chr17 80666211 80666283 -8838270 - MER112 DNA MER1_type -2 258 197 585 221 79 122 chr17 80666283 80666641 -8837912 + MER4C LTR ERV1 1 334 -131 2354 100 0 7 chr17 80666641 80666941 -8837612 + AluSx SINE Alu 1 298 -14 585 221 79 122 chr17 80666941 80667065 -8837488 + MER4C LTR ERV1 334 462 -3 288 302 160 22 chr17 80667065 80667217 -8837336 - MER112 DNA MER1_type -63 197 3 2146 117 7 0 chr17 80667223 80667513 -8837040 + AluSx SINE Alu 1 292 -20 1253 214 44 55 chr17 80667667 80668032 -8836521 - MLT1A1 LTR MaLR 0 365 5 2365 104 0 3 chr17 80668850 80669159 -8835394 + AluSq SINE Alu 1 308 -5 509 118 0 0 chr17 80669465 80669541 -8835012 - AluS SINE Alu -235 77 2 548 287 160 9 chr17 80670512 80670843 -8833710 - LTR33 LTR ERVL -4 517 137 1628 154 146 56 chr17 80670851 80671391 -8833162 + MER4A LTR ERV1 3 455 -10 288 298 53 0 chr17 80671477 80671571 -8832982 + L2 LINE L2 3169 3267 -5 1888 140 64 0 chr17 80671611 80671983 -8832570 + AluSx SINE Alu 1 389 0 1375 201 21 40 chr17 80672555 80672928 -8831625 + L1MDa LINE L1 1259 1624 -4916 467 323 176 22 chr17 80672962 80673682 -8830871 + L2 LINE L2 2201 3029 -243 * 931 274 132 32 chr17 80673681 80674019 -8830534 - L2 LINE L2 0 3313 3010 2413 62 10 3 chr17 80674019 80674310 -8830243 + AluY SINE Alu 1 293 -18 931 274 132 32 chr17 80674310 80674681 -8829872 - L2 LINE L2 -303 3010 2545 357 289 97 9 chr17 80674776 80674890 -8829663 + L2 LINE L2 3134 3257 -15 219 69 0 0 chr17 80674893 80674922 -8829631 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2217 123 3 0 chr17 80675072 80675373 -8829180 + AluSg SINE Alu 1 302 -8 260 338 63 14 chr17 80675441 80675583 -8828970 - MIR SINE MIR 0 262 114 2049 129 35 0 chr17 80675637 80675800 -8828753 - AluSx SINE Alu -16 296 117 333 0 0 0 chr17 80675800 80675837 -8828716 + (TG)n Simple_repeat Simple_repeat 2 38 0 2049 129 35 0 chr17 80675837 80675959 -8828594 - AluSx SINE Alu -195 117 1 180 152 0 0 chr17 80676572 80676605 -8827948 + G-rich Low_complexity Low_complexity 1 33 0 207 260 0 0 chr17 80677198 80677248 -8827305 + CT-rich Low_complexity Low_complexity 2 51 0 983 123 0 0 chr17 80677626 80677756 -8826797 - AluSq/x SINE Alu -183 130 1 23 0 0 0 chr17 80677909 80677932 -8826621 + AT_rich Low_complexity Low_complexity 1 23 0 227 299 73 66 chr17 80678729 80679003 -8825550 - MLT1K LTR MaLR -124 464 189 332 337 73 29 chr17 80679094 80679438 -8825115 - L2 LINE L2 -1105 2209 1851 2052 116 0 58 chr17 80679782 80680093 -8824460 - AluSg SINE Alu -17 293 1 206 263 0 18 chr17 80680930 80680987 -8823566 + T-rich Low_complexity Low_complexity 2 57 0 1181 228 162 8 chr17 80681384 80681748 -8822805 - MLT1J LTR MaLR -55 456 37 219 245 0 0 chr17 80681937 80681986 -8822567 + (ATG)n Simple_repeat Simple_repeat 3 51 0 614 240 91 54 chr17 80681990 80682211 -8822342 - MIR SINE MIR -3 259 31 280 309 40 16 chr17 80682535 80682638 -8821915 + MER5B DNA MER1_type 1 109 -69 2333 105 0 0 chr17 80682638 80682934 -8821619 + AluY SINE Alu 1 296 -15 280 309 40 16 chr17 80682934 80682956 -8821597 + MER5B DNA MER1_type 109 129 -49 213 305 150 0 chr17 80683116 80683283 -8821270 - MIR SINE MIR 0 262 71 2188 128 0 0 chr17 80683413 80683709 -8820844 - AluSx SINE Alu -10 302 7 217 355 10 3 chr17 80683712 80683851 -8820702 - MIR SINE MIR -61 147 9 1889 145 0 33 chr17 80683945 80684249 -8820304 + AluSx SINE Alu 1 294 -18 390 360 44 0 chr17 80684278 80684503 -8820050 + L1ME3A LINE L1 5652 5886 -284 857 136 0 0 chr17 80684508 80684640 -8819913 + AluJo/FLAM SINE Alu 2 133 -169 2256 133 0 0 chr17 80684640 80684940 -8819613 + AluSx SINE Alu 1 300 -12 919 136 29 0 chr17 80686057 80686197 -8818356 + FRAM SINE Alu 22 165 -11 2465 93 0 3 chr17 80686272 80686583 -8817970 - AluSx SINE Alu -2 310 1 451 325 47 14 chr17 80686920 80687132 -8817421 + MIR SINE MIR 34 252 -10 375 364 51 13 chr17 80687484 80687555 -8816998 - MIR SINE MIR -16 246 179 2165 131 3 3 chr17 80687555 80687867 -8816686 - AluSx SINE Alu 0 312 1 375 364 51 13 chr17 80687867 80688031 -8816522 - MIR SINE MIR -83 179 2 290 286 52 0 chr17 80688100 80688177 -8816376 + L2 LINE L2 3151 3231 -41 451 132 105 0 chr17 80688404 80688480 -8816073 + AluSg/x SINE Alu 217 300 -10 227 156 31 47 chr17 80688489 80688553 -8816000 + (TATTG)n Simple_repeat Simple_repeat 3 65 0 30 0 0 0 chr17 80688615 80688645 -8815908 + AT_rich Low_complexity Low_complexity 1 30 0 1606 219 3 11 chr17 80688655 80689024 -8815529 + L1MB2 LINE L1 5793 6158 -13 1503 114 22 13 chr17 80690790 80691018 -8813535 + MER4B LTR ERV1 381 610 0 1745 168 23 0 chr17 80691153 80691456 -8813097 + AluJb SINE Alu 1 310 -2 692 278 124 37 chr17 80691562 80691915 -8812638 + L2 LINE L2 2670 3049 -223 219 103 0 0 chr17 80692355 80692394 -8812159 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 273 291 82 76 chr17 80692541 80692738 -8811815 - MIR SINE MIR -49 213 20 863 215 130 22 chr17 80692971 80693194 -8811359 - MIR SINE MIR -1 261 15 441 242 8 83 chr17 80694904 80695036 -8809517 - MIR3 SINE MIR -38 170 49 450 196 238 35 chr17 80695091 80695234 -8809319 + MER5A DNA MER1_type 10 181 -8 2008 128 7 16 chr17 80695495 80695801 -8808752 + AluSx SINE Alu 1 303 -9 1685 153 10 24 chr17 80696457 80696752 -8807801 - AluSx SINE Alu -20 292 2 1437 148 0 0 chr17 80696799 80697015 -8807538 + AluSx SINE Alu 32 247 -65 261 0 0 0 chr17 80697116 80697145 -8807408 + (TA)n Simple_repeat Simple_repeat 1 29 0 1992 125 14 0 chr17 80697146 80697441 -8807112 - AluSx SINE Alu -11 301 3 225 293 178 38 chr17 80697443 80697786 -8806767 + HAL1 LINE L1 1050 1448 -1059 1760 120 0 15 chr17 80697786 80698045 -8806508 + AluSx SINE Alu 1 255 -57 225 293 178 38 chr17 80698045 80698066 -8806487 + HAL1 LINE L1 1448 1465 -1042 583 184 15 7 chr17 80698075 80698211 -8806342 + GA-rich Low_complexity Low_complexity 1 137 0 570 268 59 97 chr17 80698271 80698740 -8805813 + HAL1b LINE L1 376 1889 -618 1714 168 28 0 chr17 80698843 80699129 -8805424 + AluJb SINE Alu 1 294 -18 1042 223 29 0 chr17 80699438 80699676 -8804877 + L1MC3 LINE L1 7526 7770 -15 2121 105 0 0 chr17 80699690 80699998 -8804555 + AluSq SINE Alu 1 308 0 319 296 20 20 chr17 80700003 80700101 -8804452 + HAL1b LINE L1 777 874 -474 261 0 0 0 chr17 80700327 80700356 -8804197 + (A)n Simple_repeat Simple_repeat 1 29 0 2067 95 7 7 chr17 80700619 80700913 -8803640 + AluSg SINE Alu 4 297 -13 1616 230 19 14 chr17 80701471 80701841 -8802712 + L1MCb LINE L1 1 372 -5673 * 1818 238 92 53 chr17 80701837 80701932 -8802621 + L1MCb LINE L1 1589 1679 -4885 2129 93 10 0 chr17 80701932 80702222 -8802331 + AluSp SINE Alu 2 294 -19 1818 238 92 53 chr17 80702222 80702262 -8802291 + L1MCb LINE L1 1679 1716 -4848 1137 150 13 18 chr17 80702262 80702488 -8802065 + L1MA4 LINE L1 6075 6299 -1 1818 238 92 53 chr17 80702488 80702624 -8801929 + L1MCb LINE L1 1716 1845 -4719 1333 203 3 53 chr17 80702624 80702925 -8801628 + AluJo SINE Alu 3 288 -24 1818 238 92 53 chr17 80702925 80703356 -8801197 + L1MCb LINE L1 1845 2258 -4306 2002 116 0 30 chr17 80703356 80703657 -8800896 - AluSq SINE Alu -21 292 1 1818 238 92 53 chr17 80703657 80704432 -8800121 + L1MCb LINE L1 2258 3206 -3358 684 100 0 20 chr17 80704514 80704614 -8799939 + MER4A LTR ERV1 1 98 -566 393 132 8 5 chr17 80704614 80704735 -8799818 + MER4A LTR ERV1 261 440 -224 1917 112 0 58 chr17 80704936 80705248 -8799305 - AluSg SINE Alu -16 294 1 206 263 0 18 chr17 80706085 80706142 -8798411 + T-rich Low_complexity Low_complexity 2 57 0 268 242 263 0 chr17 80706238 80706333 -8798220 + MER96 DNA MER1_type? 1 120 -55 1224 228 162 8 chr17 80706544 80706908 -8797645 - MLT1J LTR MaLR -55 456 37 219 245 0 0 chr17 80707097 80707146 -8797407 + (ATG)n Simple_repeat Simple_repeat 3 51 0 644 250 91 50 chr17 80707150 80707370 -8797183 - MIR SINE MIR -3 259 31 294 338 40 20 chr17 80707694 80707797 -8796756 + MER5B DNA MER1_type 1 109 -69 2188 99 0 0 chr17 80707797 80708090 -8796463 + AluSc SINE Alu 1 293 -16 294 338 40 20 chr17 80708090 80708137 -8796416 + MER5B DNA MER1_type 109 154 -24 192 393 133 7 chr17 80709242 80709377 -8795176 - L2 LINE L2 -4 3268 3117 2078 104 3 28 chr17 80709513 80709830 -8794723 + AluSg SINE Alu 1 309 -1 354 159 0 0 chr17 80711306 80711375 -8793178 + (CA)n Simple_repeat Simple_repeat 1 69 0 2190 98 3 0 chr17 80711471 80711768 -8792785 + AluSq SINE Alu 1 298 -15 2257 110 0 0 chr17 80712340 80712649 -8791904 + AluSg SINE Alu 1 309 -1 571 204 124 10 chr17 80712720 80712896 -8791657 - MIR SINE MIR -21 241 48 185 277 92 0 chr17 80714554 80714619 -8789934 - L2 LINE L2 -1884 1430 1360 923 226 168 34 chr17 80714823 80715239 -8789314 - MLT1K LTR MaLR -1 475 4 2219 86 3 0 chr17 80715265 80715556 -8788997 + AluSp SINE Alu 1 292 -21 725 265 0 0 chr17 80716134 80716281 -8788272 + MER45A DNA AcHobo 1 147 -31 1343 151 53 60 chr17 80716729 80717035 -8787518 - AluSx SINE Alu 0 304 1 22 0 0 0 chr17 80717044 80717066 -8787487 + AT_rich Low_complexity Low_complexity 1 22 0 226 167 0 106 chr17 80717296 80717362 -8787191 - L1MC/D LINE L1 -1983 5825 5767 2050 120 0 10 chr17 80717549 80717848 -8786705 - AluSx SINE Alu -16 296 1 246 318 73 40 chr17 80717870 80718021 -8786532 - MIR SINE MIR -87 175 20 1951 132 3 3 chr17 80718458 80718753 -8785800 - AluSx SINE Alu -17 295 1 1937 119 0 11 chr17 80718764 80719042 -8785511 - AluSx SINE Alu -25 287 13 2154 103 0 0 chr17 80719531 80719884 -8784669 - AluSx SINE Alu 0 312 1 346 145 28 0 chr17 80720723 80720791 -8783762 - Alu SINE Alu -246 55 2 2077 104 28 0 chr17 80720816 80721103 -8783450 + AluSx SINE Alu 1 295 -17 1047 225 29 127 chr17 80721327 80721776 -8782777 + MER115 DNA AcHobo 289 693 0 1321 157 128 82 chr17 80721799 80722227 -8782326 + LTR7 LTR ERV1 1 448 -2 475 134 93 21 chr17 80722235 80722332 -8782221 + MER4A LTR ERV1 1 104 -560 * 1689 112 45 77 chr17 80722328 80722684 -8781869 + MER4A LTR ERV1 262 664 0 2183 97 10 0 chr17 80722856 80723154 -8781399 + AluSg SINE Alu 1 301 -9 1823 166 40 69 chr17 80724094 80724426 -8780127 + MLT2C1 LTR ERVL 6 325 -72 2156 76 41 0 chr17 80724426 80724716 -8779837 - AluY SINE Alu -9 302 1 1823 166 40 69 chr17 80724716 80724787 -8779766 + MLT2C1 LTR ERVL 325 397 0 798 263 111 18 chr17 80724815 80725001 -8779552 + L1MC4a LINE L1 5474 5641 -2167 2086 115 14 0 chr17 80725001 80725296 -8779257 + AluSx SINE Alu 1 299 -13 798 263 111 18 chr17 80725296 80725451 -8779102 + L1MC4a LINE L1 5641 5847 -1961 2118 188 71 121 chr17 80725463 80726116 -8778437 + LTR1B LTR ERV1 17 823 -197 1974 129 0 19 chr17 80726116 80726427 -8778126 - AluSx SINE Alu -7 305 1 2118 188 71 121 chr17 80726427 80726579 -8777974 + LTR1B LTR ERV1 823 981 -39 225 217 0 0 chr17 80726681 80726727 -8777826 + L1ME4a LINE L1 5866 5911 -1897 26 0 0 0 chr17 80726883 80726909 -8777644 + AT_rich Low_complexity Low_complexity 1 26 0 1609 169 6 34 chr17 80726913 80727233 -8777320 + AluJo SINE Alu 1 311 -1 1700 164 0 16 chr17 80727252 80727564 -8776989 - AluJb SINE Alu -5 307 1 597 209 0 30 chr17 80727636 80727770 -8776783 - L1MC1 LINE L1 0 6333 6204 370 256 40 34 chr17 80727874 80728050 -8776503 + L1ME4a LINE L1 5942 6118 -3 321 47 93 0 chr17 80728322 80728365 -8776188 - MLT1A1 LTR MaLR 0 374 328 512 0 0 31 chr17 80728366 80728431 -8776122 + (ATATG)n Simple_repeat Simple_repeat 4 66 0 1482 136 13 4 chr17 80728432 80728667 -8775886 - AluSx SINE Alu -25 287 51 1803 97 16 16 chr17 80728767 80729024 -8775529 - AluSp SINE Alu -56 257 1 825 196 7 13 chr17 80729024 80729177 -8775376 - MLT1A1 LTR MaLR -206 159 8 2097 105 0 3 chr17 80729386 80729699 -8774854 - AluSq SINE Alu 0 312 1 240 35 0 0 chr17 80729815 80729844 -8774709 + (TC)n Simple_repeat Simple_repeat 2 30 0 681 243 106 5 chr17 80729871 80730060 -8774493 + MIR SINE MIR 23 230 -32 256 289 53 18 chr17 80730258 80730372 -8774181 - MIR3 SINE MIR -4 204 87 1879 128 3 17 chr17 80730507 80730805 -8773748 - AluSq SINE Alu -19 294 1 2076 116 0 0 chr17 80731398 80731711 -8772842 - AluSq SINE Alu 0 313 1 213 39 0 0 chr17 80731831 80731857 -8772696 + (TTCC)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 80732107 80732154 -8772399 + (TG)n Simple_repeat Simple_repeat 2 48 0 1329 181 3 73 chr17 80732159 80732313 -8772240 - AluJo SINE Alu -30 282 119 195 42 0 0 chr17 80732313 80732337 -8772216 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1886 140 0 3 chr17 80732337 80732623 -8771930 - AluSx SINE Alu -27 285 1 1329 181 3 73 chr17 80732623 80732770 -8771783 - AluJo SINE Alu -191 121 1 2252 101 0 3 chr17 80733218 80733526 -8771027 - AluSg SINE Alu -3 307 1 1784 138 34 24 chr17 80734362 80734658 -8769895 + AluJo SINE Alu 14 312 0 387 291 85 72 chr17 80734658 80734964 -8769589 - L2 LINE L2 -128 3185 2876 971 169 6 0 chr17 80735497 80735657 -8768896 - FRAM SINE Alu -5 161 1 2188 84 7 32 chr17 80735666 80735974 -8768579 - AluSx SINE Alu -12 300 1 198 167 0 0 chr17 80736819 80736855 -8767698 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 1632 266 31 13 chr17 80737145 80737597 -8766956 - LTR16B LTR ERVL 0 464 5 523 199 0 11 chr17 80737681 80737883 -8766670 + (TG)n Simple_repeat Simple_repeat 1 199 0 239 191 21 0 chr17 80737884 80737931 -8766622 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 372 267 0 0 chr17 80737934 80738114 -8766439 + (TG)n Simple_repeat Simple_repeat 1 180 0 442 215 18 6 chr17 80738162 80738509 -8766044 + (TG)n Simple_repeat Simple_repeat 1 351 0 280 234 19 13 chr17 80738529 80738683 -8765870 + (TG)n Simple_repeat Simple_repeat 2 156 0 516 204 22 6 chr17 80738713 80739033 -8765520 + (TG)n Simple_repeat Simple_repeat 1 325 0 905 273 114 35 chr17 80739308 80739791 -8764762 - LTR33 LTR ERVL 0 521 1 2214 106 0 6 chr17 80741615 80741926 -8762627 + AluSx SINE Alu 1 309 -3 268 305 16 62 chr17 80742032 80742160 -8762393 - MER5A DNA MER1_type 0 189 68 344 170 61 34 chr17 80742350 80742497 -8762056 + (GTGTG)n Simple_repeat Simple_repeat 1 151 0 249 161 42 35 chr17 80742504 80742647 -8761906 + (ATGTG)n Simple_repeat Simple_repeat 1 144 0 228 164 41 27 chr17 80742647 80742720 -8761833 + (GTGTG)n Simple_repeat Simple_repeat 4 77 0 222 134 53 41 chr17 80743253 80743424 -8761129 + (ATGTG)n Simple_repeat Simple_repeat 5 177 0 208 139 63 0 chr17 80743448 80743527 -8761026 + (TG)n Simple_repeat Simple_repeat 2 85 0 1358 246 85 11 chr17 80743989 80744355 -8760198 - MLT1C LTR MaLR -74 393 1 1974 119 22 19 chr17 80744451 80744762 -8759791 + AluSx SINE Alu 1 312 0 969 71 53 6 chr17 80744782 80744952 -8759601 + GA-rich Low_complexity Low_complexity 1 178 0 641 217 0 6 chr17 80744964 80745125 -8759428 + GA-rich Low_complexity Low_complexity 3 162 0 1938 115 14 0 chr17 80745147 80745425 -8759128 + AluSx SINE Alu 1 282 -30 2100 93 0 23 chr17 80745813 80746115 -8758438 + AluSx SINE Alu 1 295 -17 189 240 20 0 chr17 80748106 80748156 -8756397 + MIR SINE MIR 81 131 -77 236 278 90 20 chr17 80748823 80748968 -8755585 - MIR SINE MIR -36 172 3 2040 134 0 3 chr17 80749415 80749720 -8754833 - AluSx SINE Alu -8 304 1 2262 97 0 0 chr17 80750967 80751267 -8753286 + AluSg SINE Alu 1 300 -10 2393 84 0 0 chr17 80752275 80752586 -8751967 - AluY SINE Alu 0 311 1 501 259 29 7 chr17 80753551 80753690 -8750863 - MER117 DNA MER1_type -7 190 49 261 0 0 0 chr17 80754922 80754951 -8749602 + (CAGCC)n Simple_repeat Simple_repeat 4 32 0 1760 181 0 3 chr17 80755884 80756183 -8748370 - AluJb SINE Alu -12 300 3 2101 65 72 0 chr17 80757657 80757935 -8746618 + AluSx SINE Alu 1 298 -14 32 43 0 0 chr17 80758111 80758157 -8746396 + GC_rich Low_complexity Low_complexity 1 46 0 390 275 115 40 chr17 80761435 80761635 -8742918 + MIR SINE MIR 29 243 -19 900 119 0 0 chr17 80761814 80761932 -8742621 + FLAM_C SINE Alu 1 118 -15 357 267 147 31 chr17 80762087 80762154 -8742399 + L2 LINE L2 3026 3084 -229 1480 150 42 0 chr17 80762154 80762414 -8742139 - AluJb SINE Alu 0 312 42 357 267 147 31 chr17 80762414 80762604 -8741949 + L2 LINE L2 3084 3313 0 331 268 115 66 chr17 80762740 80762923 -8741630 + MIR SINE MIR 20 211 -51 945 108 0 0 chr17 80763268 80763397 -8741156 + FLAM_C SINE Alu 1 129 -14 904 132 29 0 chr17 80763906 80764042 -8740511 + AluSq/x SINE Alu 6 145 -167 2198 128 0 0 chr17 80764042 80764354 -8740199 + AluSx SINE Alu 1 312 0 1384 195 7 34 chr17 80764843 80765141 -8739412 - AluJo SINE Alu -22 290 1 1306 128 198 12 chr17 80765811 80766054 -8738499 - AluJo SINE Alu -13 289 2 673 149 9 0 chr17 80766073 80766180 -8738373 - FLAM_C SINE Alu -34 109 2 706 170 18 0 chr17 80766238 80766350 -8738203 - AluJb SINE Alu -197 115 2 2434 63 0 3 chr17 80766748 80767047 -8737506 - AluY SINE Alu -13 298 1 932 323 84 18 chr17 80767766 80768509 -8736044 - L2 LINE L2 0 3313 2503 2017 143 0 0 chr17 80768529 80768823 -8735730 + AluSx SINE Alu 3 296 -16 204 158 0 0 chr17 80768879 80768917 -8735636 + (CA)n Simple_repeat Simple_repeat 2 39 0 717 264 38 42 chr17 80768940 80769148 -8735405 + MIR SINE MIR 21 229 -33 2187 193 80 23 chr17 80769148 80769625 -8734928 - MLT1D LTR MaLR -1 504 1 717 264 38 42 chr17 80769625 80769655 -8734898 + MIR SINE MIR 229 258 -4 242 342 72 0 chr17 80771204 80771315 -8733238 + MIR SINE MIR 29 147 -61 489 17 0 0 chr17 80771781 80771839 -8732714 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 1859 144 0 7 chr17 80771839 80772123 -8732430 - AluSq SINE Alu -29 284 3 1425 106 0 53 chr17 80773527 80773754 -8730799 + L1PA15 LINE L1 5938 6152 -13 2226 116 0 0 chr17 80773788 80774098 -8730455 - AluSg SINE Alu 0 310 1 1385 222 89 20 chr17 80774229 80774621 -8729932 + MLT1C LTR MaLR 6 424 -43 455 292 107 34 chr17 80774648 80774740 -8729813 + L2 LINE L2 2655 2739 -574 2010 124 0 3 chr17 80774740 80775096 -8729457 + AluSx SINE Alu 1 355 0 455 292 107 34 chr17 80775096 80775338 -8729215 + L2 LINE L2 2739 3031 -282 2073 104 0 35 chr17 80775340 80775657 -8728896 + AluSx SINE Alu 1 306 -6 2118 151 31 31 chr17 80775668 80776053 -8728500 + MLT1B LTR MaLR 6 390 0 365 302 8 32 chr17 80776150 80776276 -8728277 + L2 LINE L2 3191 3313 0 24 0 0 0 chr17 80776337 80776361 -8728192 + AT_rich Low_complexity Low_complexity 1 24 0 1688 166 35 0 chr17 80776467 80776751 -8727802 + AluSx SINE Alu 11 304 -8 884 155 18 18 chr17 80776751 80776919 -8727634 + AluSg/x SINE Alu 134 301 -11 229 234 0 78 chr17 80777250 80777327 -8727226 + MIR SINE MIR 113 183 -79 270 288 117 86 chr17 80777473 80777695 -8726858 + L2 LINE L2 3044 3272 0 190 309 0 44 chr17 80778495 80778563 -8725990 + MIR SINE MIR 148 212 -50 422 220 167 0 chr17 80780287 80780419 -8724134 - L1M4 LINE L1 -1253 4893 4740 1838 161 0 34 chr17 80780453 80780776 -8723777 - AluJb SINE Alu 0 312 1 2041 129 11 51 chr17 80780807 80781163 -8723390 + L1PA16 LINE L1 5825 6166 0 288 159 0 0 chr17 80781181 80781225 -8723328 - Alu SINE Alu -259 44 1 1645 99 0 0 chr17 80781329 80781575 -8722978 + AluSp SINE Alu 63 308 0 2797 184 16 5 chr17 80781750 80782315 -8722238 + L1P5 LINE L1 4872 5451 -703 2015 151 3 0 chr17 80782315 80782619 -8721934 + AluSx SINE Alu 1 305 -7 2797 184 16 5 chr17 80782619 80782736 -8721817 + L1P5 LINE L1 5451 5565 -589 1956 122 0 0 chr17 80782780 80783059 -8721494 + AluSx SINE Alu 34 312 0 1335 264 32 60 chr17 80783069 80783516 -8721037 + L1M4 LINE L1 3410 3868 -2278 2367 54 3 3 chr17 80783516 80783814 -8720739 + AluY SINE Alu 1 298 -13 2181 89 7 3 chr17 80783824 80784126 -8720427 + AluSc SINE Alu 1 303 -6 1335 264 32 60 chr17 80784126 80784318 -8720235 + L1M4 LINE L1 3877 4042 -2104 1457 171 13 56 chr17 80784443 80784748 -8719805 - AluJo SINE Alu -14 298 7 1558 119 9 0 chr17 80784966 80785213 -8719340 - AluSg/x SINE Alu 0 333 85 1146 127 0 0 chr17 80785215 80785373 -8719180 - AluSq SINE Alu -155 158 1 277 262 103 48 chr17 80785459 80785585 -8718968 - MIR SINE MIR -27 235 103 1262 225 28 31 chr17 80786320 80786542 -8718011 + MER33 DNA MER1_type 1 222 -2363 2030 106 40 23 chr17 80786542 80786843 -8717710 - AluSx SINE Alu -6 306 1 1262 225 28 31 chr17 80786843 80786861 -8717692 + MER33 DNA MER1_type 222 239 -2346 2257 119 0 0 chr17 80786861 80787173 -8717380 - AluSx SINE Alu 0 312 1 1262 225 28 31 chr17 80787173 80787256 -8717297 + MER33 DNA MER1_type 239 324 0 585 338 54 0 chr17 80787264 80787468 -8717085 + MIR SINE MIR 48 262 0 314 254 170 2 chr17 80790388 80790538 -8714015 + MIR3 SINE MIR 4 183 -67 201 250 0 78 chr17 80791397 80791474 -8713079 - MIR SINE MIR -102 106 59 477 318 23 6 chr17 80792291 80792467 -8712086 - MIR3 SINE MIR -10 198 20 232 162 15 15 chr17 80792891 80792959 -8711594 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 2288 87 3 10 chr17 80793142 80793452 -8711101 - AluSq SINE Alu -5 308 1 340 247 193 30 chr17 80793542 80793708 -8710845 - MIR3 SINE MIR 0 208 16 2204 113 3 3 chr17 80795843 80796152 -8708401 - AluSc SINE Alu 0 309 1 2079 116 14 0 chr17 80796152 80796444 -8708109 - AluSx SINE Alu -14 298 3 415 313 60 8 chr17 80796489 80796623 -8707930 + MER5A DNA MER1_type 15 155 -34 282 235 98 88 chr17 80796700 80796768 -8707785 - MER112 DNA MER1_type -11 249 183 323 23 23 0 chr17 80796768 80796812 -8707741 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1952 120 0 21 chr17 80796813 80797097 -8707456 - AluSx SINE Alu -34 278 1 282 235 98 88 chr17 80797097 80797230 -8707323 - MER112 DNA MER1_type -76 184 44 757 174 0 0 chr17 80797242 80797357 -8707196 + FLAM_C SINE Alu 15 129 -14 272 246 33 0 chr17 80801231 80801292 -8703261 + MIR SINE MIR 81 143 -65 485 291 103 20 chr17 80802893 80803096 -8701457 - MIR SINE MIR -22 240 21 272 62 0 0 chr17 80805006 80805054 -8699499 - AluSp SINE Alu 0 303 256 601 114 0 23 chr17 80805054 80805142 -8699411 - AluSp SINE Alu -143 170 85 2441 53 3 3 chr17 80805142 80805444 -8699109 - AluY SINE Alu -9 302 1 207 0 0 0 chr17 80805444 80805467 -8699086 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2034 113 0 3 chr17 80805467 80805749 -8698804 - AluSg SINE Alu -29 281 1 2086 137 0 3 chr17 80805769 80806082 -8698471 - AluJo SINE Alu 0 312 1 233 197 14 0 chr17 80807176 80807247 -8697306 + (CGGGA)n Simple_repeat Simple_repeat 2 73 0 252 304 109 22 chr17 80807474 80807612 -8696941 + L3 LINE CR1 1412 1561 -16 2286 68 20 0 chr17 80808231 80808524 -8696029 + AluSq SINE Alu 1 299 -14 2129 100 3 61 chr17 80809231 80809561 -8694992 - AluSq SINE Alu -2 311 1 1181 189 0 35 chr17 80811551 80811778 -8692775 + MER20 DNA MER1_type 1 219 0 1473 189 71 4 chr17 80811892 80812172 -8692381 - AluJo SINE Alu -13 299 1 626 326 69 53 chr17 80812419 80812701 -8691852 + L2 LINE L2 2831 3124 -148 1855 115 4 4 chr17 80812701 80812961 -8691592 - AluSx SINE Alu -52 260 1 626 326 69 53 chr17 80812961 80813111 -8691442 + L2 LINE L2 3124 3270 -2 2043 123 3 3 chr17 80813441 80813741 -8690812 + AluSx SINE Alu 1 300 -12 260 330 84 69 chr17 80813841 80814102 -8690451 - L2 LINE L2 -35 3237 2973 2332 91 7 0 chr17 80814312 80814620 -8689933 - AluSg SINE Alu 0 310 1 235 200 0 0 chr17 80814873 80814918 -8689635 - L2 LINE L2 -671 2643 2599 791 158 82 16 chr17 80815382 80815565 -8688988 + L1MB7 LINE L1 5990 6184 0 2748 16 0 0 chr17 80817934 80818241 -8686312 + AluYb8 SINE Alu 1 307 -11 2241 95 0 7 chr17 80818391 80818687 -8685866 - AluSg SINE Alu -16 294 1 1895 137 3 44 chr17 80819842 80820157 -8684396 + AluSx SINE Alu 1 302 -10 2374 94 3 0 chr17 80820157 80820465 -8684088 + AluSq SINE Alu 1 309 -4 1255 133 0 10 chr17 80820534 80820729 -8683824 - AluJb SINE Alu 0 312 120 197 339 58 41 chr17 80821022 80821143 -8683410 + MIR3 SINE MIR 9 131 -77 180 0 0 0 chr17 80821366 80821386 -8683167 + (A)n Simple_repeat Simple_repeat 1 20 0 2467 50 0 0 chr17 80822458 80822756 -8681797 + AluY SINE Alu 1 298 -13 2079 149 0 0 chr17 80822762 80823071 -8681482 + AluSx SINE Alu 1 309 -3 28 29 0 0 chr17 80826286 80826321 -8678232 + GC_rich Low_complexity Low_complexity 1 35 0 250 152 22 0 chr17 80832403 80832449 -8672104 - Alu SINE Alu -255 47 1 1781 161 14 0 chr17 80833197 80833506 -8671047 - AluJb SINE Alu 0 313 1 2109 123 3 19 chr17 80833538 80833846 -8670707 - AluJo SINE Alu -9 303 1 351 290 47 0 chr17 80835300 80835407 -8669146 - MIR3 SINE MIR -20 188 77 1983 120 41 0 chr17 80836708 80836999 -8667554 + AluSg SINE Alu 1 303 -7 1962 154 0 6 chr17 80837010 80837321 -8667232 + AluJo SINE Alu 1 309 -3 210 71 0 0 chr17 80837329 80837357 -8667196 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 367 277 95 0 chr17 80837386 80837523 -8667030 - MIR SINE MIR -93 169 20 202 346 0 12 chr17 80839374 80839455 -8665098 + L2 LINE L2 2979 3058 -214 320 256 86 34 chr17 80839653 80839770 -8664783 - L2 LINE L2 -181 3091 2969 314 304 117 29 chr17 80840068 80840239 -8664314 - MIR SINE MIR -42 220 35 721 249 18 0 chr17 80841158 80841327 -8663226 + MER5A DNA MER1_type 18 189 0 263 269 15 15 chr17 80841327 80841386 -8663167 + MER5B DNA MER1_type 74 132 -46 249 291 39 0 chr17 80841490 80841593 -8662960 + L2 LINE L2 2553 2659 -655 986 229 39 64 chr17 80841643 80842001 -8662552 + L1MC5 LINE L1 7452 7800 -161 293 293 92 61 chr17 80842324 80842618 -8661935 + L2 LINE L2 2888 3190 -82 237 232 0 0 chr17 80843569 80843625 -8660928 + GA-rich Low_complexity Low_complexity 2 57 0 545 213 30 43 chr17 80843770 80843936 -8660617 + MIR3 SINE MIR 7 165 -43 348 317 88 77 chr17 80844021 80844633 -8659920 - L3 LINE CR1 -373 1204 586 2369 90 0 3 chr17 80844798 80845109 -8659444 - AluY SINE Alu -1 310 1 184 319 35 71 chr17 80845308 80845421 -8659132 - L2 LINE L2 -15 3257 3149 1335 224 31 19 chr17 80846049 80846366 -8658187 + MER33 DNA MER1_type 1 321 -3 200 292 155 25 chr17 80847136 80847297 -8657256 + L2 LINE L2 2894 3075 -197 188 231 0 0 chr17 80847444 80847483 -8657070 + L2 LINE L2 3189 3227 -86 234 0 0 0 chr17 80848213 80848239 -8656314 + (CGG)n Simple_repeat Simple_repeat 3 28 0 29 70 0 0 chr17 80848292 80848349 -8656204 + GC_rich Low_complexity Low_complexity 1 57 0 180 0 0 0 chr17 80849893 80849913 -8654640 + (CGGGGG)n Simple_repeat Simple_repeat 3 22 0 220 207 17 0 chr17 80850078 80850136 -8654417 + (CCCCG)n Simple_repeat Simple_repeat 2 60 0 181 188 167 0 chr17 80850244 80850292 -8654261 + MIR SINE MIR 46 101 -161 344 254 127 0 chr17 80851911 80852021 -8652532 + L2 LINE L2 3149 3272 0 183 268 36 0 chr17 80852095 80852151 -8652402 + L2 LINE L2 3214 3271 -1 356 308 142 40 chr17 80853459 80853888 -8650665 - L2 LINE L2 -5 3308 2836 2307 93 0 0 chr17 80855365 80855666 -8648887 + AluSx SINE Alu 11 311 -1 289 403 44 0 chr17 80856053 80856212 -8648341 + MIR SINE MIR 17 182 -80 295 240 0 62 chr17 80856556 80856652 -8647901 + MIR SINE MIR 18 107 -101 203 349 124 0 chr17 80856777 80856906 -8647647 + L2 LINE L2 2719 2863 -451 202 139 0 28 chr17 80857016 80857052 -8647501 + (TTCC)n Simple_repeat Simple_repeat 2 36 0 267 296 88 16 chr17 80857550 80857675 -8646878 - MER5A DNA MER1_type -19 170 37 486 303 125 33 chr17 80857721 80858178 -8646375 + L2 LINE L2 2776 3271 -1 256 340 162 20 chr17 80858172 80858369 -8646184 + MIR SINE MIR 16 240 -22 * 2292 104 0 0 chr17 80858564 80858871 -8645682 + AluSx SINE Alu 1 307 -5 1936 144 6 10 chr17 80859121 80859433 -8645120 - AluSx SINE Alu -1 311 1 666 146 115 18 chr17 80862045 80862210 -8642343 + MER96B DNA MER1_type? 3 183 -234 613 214 55 40 chr17 80862392 80862603 -8641950 - L1ME3A LINE L1 -3 6163 5955 1265 218 40 60 chr17 80862635 80862743 -8641810 + MER58B DNA MER1_type 1 110 -2310 1835 143 29 16 chr17 80862743 80863051 -8641502 - AluJb SINE Alu 0 312 1 1265 218 40 60 chr17 80863051 80863290 -8641263 + MER58B DNA MER1_type 110 341 0 305 283 87 11 chr17 80863290 80863382 -8641171 + L2 LINE L2 3189 3287 -26 459 285 136 25 chr17 80863422 80863657 -8640896 + MIR SINE MIR 2 262 0 871 186 149 4 chr17 80864178 80864420 -8640133 - LTR33 LTR ERVL -2 519 243 800 131 68 57 chr17 80864699 80864846 -8639707 + MER20 DNA MER1_type 42 193 -26 2140 108 3 3 chr17 80864846 80865141 -8639412 + AluSx SINE Alu 1 295 -17 800 131 68 57 chr17 80865141 80865169 -8639384 + MER20 DNA MER1_type 193 219 0 2223 114 0 3 chr17 80865656 80865964 -8638589 - AluSg SINE Alu -3 307 1 428 257 96 28 chr17 80867056 80867241 -8637312 - MIR SINE MIR -1 261 61 1775 150 17 3 chr17 80867370 80867657 -8636896 - AluJb SINE Alu -10 302 12 235 273 58 25 chr17 80868044 80868165 -8636388 + MIR3 SINE MIR 51 175 -33 1963 128 37 0 chr17 80868678 80868976 -8635577 - AluSx SINE Alu -3 309 1 234 207 35 81 chr17 80869113 80869200 -8635353 + L2 LINE L2 3188 3270 -2 1479 146 12 116 chr17 80869748 80870084 -8634469 + AluJb SINE Alu 1 301 -1 203 186 0 23 chr17 80870084 80870116 -8634437 + GA-rich Low_complexity Low_complexity 12 44 0 1988 118 7 3 chr17 80870273 80870562 -8633991 - AluSx SINE Alu -16 296 7 351 233 164 9 chr17 80870626 80870742 -8633811 - MIR SINE MIR -128 134 1 1927 114 29 48 chr17 80871985 80872300 -8632253 - AluSx SINE Alu -3 309 1 408 152 232 0 chr17 80872647 80872772 -8631781 + MER53 DNA DNA 5 158 -31 1409 119 71 140 chr17 80872778 80873047 -8631506 - MSTA LTR MaLR 0 428 193 2108 96 17 3 chr17 80873047 80873340 -8631213 - AluSx SINE Alu -15 297 1 1409 119 71 140 chr17 80873340 80873464 -8631089 - MSTA LTR MaLR -235 193 62 25 0 0 0 chr17 80873635 80873660 -8630893 + AT_rich Low_complexity Low_complexity 1 25 0 260 160 0 0 chr17 80873660 80873710 -8630843 - MSTA LTR MaLR -376 50 1 610 151 0 0 chr17 80874204 80874290 -8630263 + AluSp SINE Alu 1 86 -226 2434 66 0 0 chr17 80874290 80874591 -8629962 + AluY SINE Alu 1 301 -10 1451 129 30 0 chr17 80874591 80874821 -8629732 + AluSp SINE Alu 75 313 0 181 342 142 27 chr17 80875023 80875248 -8629305 + L2 LINE L2 2804 3054 -218 558 205 16 0 chr17 80875249 80875371 -8629182 - MER20 DNA MER1_type -4 215 92 1574 141 0 80 chr17 80875392 80875691 -8628862 - AluJo SINE Alu -9 303 29 226 167 21 0 chr17 80875710 80875758 -8628795 - MER20 DNA MER1_type -134 85 37 382 314 34 53 chr17 80875829 80876019 -8628534 + MIR SINE MIR 60 247 -15 2126 100 0 7 chr17 80876019 80876319 -8628234 - AluSc SINE Alu -11 298 1 382 314 34 53 chr17 80876319 80876335 -8628218 + MIR SINE MIR 247 262 0 188 356 56 0 chr17 80876339 80876429 -8628124 + L2 LINE L2 3123 3217 -55 261 0 0 0 chr17 80876460 80876489 -8628064 + (CA)n Simple_repeat Simple_repeat 1 29 0 504 220 31 13 chr17 80876504 80876663 -8627890 + L1MD2 LINE L1 6197 6358 -1 21 36 0 0 chr17 80876698 80876726 -8627827 + AT_rich Low_complexity Low_complexity 1 28 0 210 152 0 61 chr17 80877861 80877909 -8626644 + (CAAA)n Simple_repeat Simple_repeat 2 47 -16 2093 110 3 16 chr17 80877909 80878217 -8626336 + AluSx SINE Alu 1 304 -8 210 152 0 61 chr17 80878217 80878234 -8626319 + (CAAA)n Simple_repeat Simple_repeat 47 63 0 383 295 8 39 chr17 80878334 80878463 -8626090 - MIR SINE MIR -62 200 76 656 131 0 10 chr17 80878470 80878569 -8625984 - AluJb SINE Alu -201 111 14 226 256 156 22 chr17 80879187 80879277 -8625276 - MER5A DNA MER1_type -2 187 86 250 167 0 0 chr17 80879277 80879319 -8625234 + MER5A DNA MER1_type 147 188 -1 210 91 0 0 chr17 80879423 80879456 -8625097 + (T)n Simple_repeat Simple_repeat 1 33 0 1454 100 0 0 chr17 80879472 80879662 -8624891 - AluSx SINE Alu -122 190 1 199 358 42 0 chr17 80882431 80882526 -8622027 + L2 LINE L2 3136 3234 -38 1052 139 6 39 chr17 80883144 80883324 -8621229 - FRAM SINE Alu -6 170 1 2088 113 3 3 chr17 80883533 80883833 -8620720 + AluSq SINE Alu 1 300 -13 305 325 28 8 chr17 80883833 80883949 -8620604 - MIR3 SINE MIR -52 156 32 2227 100 0 0 chr17 80883970 80884260 -8620293 - AluSc SINE Alu -9 300 11 797 196 55 6 chr17 80884659 80884822 -8619731 + FRAM SINE Alu 6 176 0 198 348 51 38 chr17 80884884 80885200 -8619353 - L2 LINE L2 -438 2876 2557 758 178 12 0 chr17 80885210 80885373 -8619180 + L1ME3A LINE L1 5319 5483 -687 2395 99 0 0 chr17 80885379 80885691 -8618862 + AluSx SINE Alu 1 312 0 241 262 164 16 chr17 80885722 80885844 -8618709 + L1ME3A LINE L1 5636 5775 -395 1018 247 30 10 chr17 80885871 80886167 -8618386 + L1ME3A LINE L1 5861 6162 -8 2091 129 0 10 chr17 80886195 80886504 -8618049 - AluSx SINE Alu -4 308 3 342 206 15 15 chr17 80887031 80887126 -8617427 + MIR SINE MIR 38 132 -76 2141 93 3 35 chr17 80887163 80887475 -8617078 + AluSg SINE Alu 1 302 -8 286 242 15 0 chr17 80887476 80887542 -8617011 - Charlie7 DNA MER1_type -2510 102 36 244 133 22 0 chr17 80887876 80887921 -8616632 - L2 LINE L2 -5 3308 3263 485 178 10 10 chr17 80888071 80888172 -8616381 - MLT1J2 LTR MaLR 0 450 350 521 227 43 21 chr17 80888229 80888391 -8616162 - MLT1J2 LTR MaLR -241 205 39 313 233 29 68 chr17 80888661 80888764 -8615789 + L2 LINE L2 3174 3272 0 307 296 73 73 chr17 80890021 80890200 -8614353 + MIR SINE MIR 26 204 -58 275 302 166 53 chr17 80890657 80890826 -8613727 - MIR SINE MIR -23 239 52 2258 86 3 9 chr17 80891141 80891456 -8613097 + AluSp SINE Alu 1 313 0 411 98 0 0 chr17 80891502 80891563 -8612990 + (CA)n Simple_repeat Simple_repeat 1 61 0 2090 101 0 17 chr17 80891655 80891951 -8612602 + AluSx SINE Alu 7 297 -15 180 0 0 0 chr17 80892025 80892045 -8612508 + (CA)n Simple_repeat Simple_repeat 1 20 0 238 234 0 138 chr17 80892555 80892649 -8611904 + MIR SINE MIR 113 193 -69 748 271 20 41 chr17 80893015 80893259 -8611294 - MIR SINE MIR 0 262 24 436 264 74 20 chr17 80893381 80893529 -8611024 + MIR3 SINE MIR 39 194 -14 2095 118 0 0 chr17 80893781 80894097 -8610456 - AluSx SINE Alu 0 318 3 967 135 0 0 chr17 80894099 80894240 -8610313 - AluJ SINE Alu -6 306 166 9241 102 57 51 chr17 80894244 80896819 -8607734 - pTR5 LTR ERV1 0 8399 504 484 172 10 35 chr17 80896815 80897018 -8607535 - HERV17 LTR ERV1 -7726 900 703 * 25427 87 9 15 chr17 80897066 80901865 -8602688 + HERV9 LTR ERV1 1 4754 -1949 3252 91 154 151 chr17 80901863 80902756 -8601797 + pTR5 LTR ERV1 1537 2432 -6 * 826 191 7 0 chr17 80902765 80902901 -8601652 - AluJ SINE Alu -143 169 33 2074 49 0 0 chr17 80902911 80903155 -8601398 - AluY SINE Alu -7 304 61 323 244 0 94 chr17 80903596 80903723 -8600830 + MIR3 SINE MIR 93 207 -1 542 235 5 0 chr17 80905182 80905405 -8599148 + (CA)n Simple_repeat Simple_repeat 1 224 0 2199 89 31 0 chr17 80906840 80907133 -8597420 + AluSq SINE Alu 1 302 -11 338 324 21 71 chr17 80907203 80907441 -8597112 + MIR SINE MIR 22 247 -15 402 258 6 66 chr17 80907473 80907655 -8596898 + MER104 DNA Tc2 7 177 -3 21 57 0 0 chr17 80911466 80911501 -8593052 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 80911560 80911589 -8592964 + GC_rich Low_complexity Low_complexity 1 29 0 256 281 19 0 chr17 80913609 80913769 -8590784 + (TCCA)n Simple_repeat Simple_repeat 2 164 0 349 277 25 99 chr17 80914833 80915035 -8589518 + L1M4 LINE L1 3451 3637 -2509 2140 98 12 58 chr17 80915042 80915369 -8589184 - AluSx SINE Alu 0 312 1 1851 171 0 7 chr17 80916353 80916657 -8587896 + AluJb SINE Alu 1 302 -10 568 281 67 0 chr17 80916818 80916982 -8587571 - MIR SINE MIR -13 249 75 274 212 91 0 chr17 80917342 80917408 -8587145 + MIR3 SINE MIR 87 158 -50 2201 96 0 0 chr17 80917701 80918018 -8586535 - AluSx SINE Alu 0 317 1 286 192 0 0 chr17 80918049 80918101 -8586452 + L2 LINE L2 3262 3313 0 235 283 17 83 chr17 80918073 80918193 -8586360 - L2 LINE L2 -10 3262 3151 * 749 72 0 10 chr17 80918193 80918290 -8586263 + AluS SINE Alu 1 96 -216 1249 131 11 0 chr17 80918391 80918582 -8585971 + AluSq SINE Alu 112 304 -9 2220 99 7 10 chr17 80920050 80920352 -8584201 + AluSg SINE Alu 1 301 -9 281 300 82 18 chr17 80921045 80921155 -8583398 - MIR3 SINE MIR -36 172 56 180 219 110 55 chr17 80922333 80922406 -8582147 - MIR3 SINE MIR -7 201 125 1522 160 85 11 chr17 80922500 80922664 -8581889 - AluJo SINE Alu -9 303 153 306 0 0 0 chr17 80922664 80922698 -8581855 + (TG)n Simple_repeat Simple_repeat 1 34 0 1522 160 85 11 chr17 80922698 80922815 -8581738 - AluJo SINE Alu -159 153 1 492 181 8 27 chr17 80922846 80922966 -8581587 - MIR3 SINE MIR -30 178 63 1982 118 23 10 chr17 80923066 80923370 -8581183 + AluSq SINE Alu 1 308 -5 207 196 59 147 chr17 80925205 80925307 -8579246 - MIR SINE MIR -4 258 166 1996 129 3 7 chr17 80925331 80925633 -8578920 - AluJb SINE Alu -11 301 1 218 294 0 0 chr17 80925633 80925684 -8578869 - L2 LINE L2 -6 3307 3257 193 221 26 91 chr17 80925662 80925739 -8578814 - MIR SINE MIR -93 169 98 * 234 316 151 14 chr17 80926793 80927011 -8577542 - L2 LINE L2 -221 3051 2804 219 355 11 0 chr17 80927083 80927176 -8577377 - L2 LINE L2 -501 2813 2720 1756 175 0 19 chr17 80927254 80927562 -8576991 + AluJo SINE Alu 1 302 -10 1119 214 0 130 chr17 80928273 80928457 -8576096 - AluY SINE Alu 0 301 181 429 70 0 0 chr17 80928457 80928514 -8576039 + (CA)n Simple_repeat Simple_repeat 2 58 0 1119 214 0 130 chr17 80928514 80928675 -8575878 - AluY SINE Alu -120 181 1 2072 132 6 6 chr17 80928821 80929154 -8575399 + MER1B DNA MER1_type 1 333 -6 438 270 0 8 chr17 80929230 80929356 -8575197 - MER117 DNA MER1_type -72 125 1 385 286 149 41 chr17 80929827 80929853 -8574700 - L2 LINE L2 -211 3061 3039 1950 82 3 106 chr17 80929853 80930184 -8574369 - AluSg SINE Alu -13 297 1 385 286 149 41 chr17 80930184 80930684 -8573869 - L2 LINE L2 -233 3039 2457 2188 118 0 10 chr17 80930687 80931001 -8573552 + AluSq SINE Alu 1 311 -2 1824 230 20 55 chr17 80931007 80931211 -8573342 + MLT1G LTR MaLR 13 223 -367 1986 138 3 16 chr17 80931211 80931523 -8573030 - AluJo SINE Alu 0 312 5 1824 230 20 55 chr17 80931523 80931917 -8572636 + MLT1G LTR MaLR 223 590 0 194 367 167 20 chr17 80931944 80932249 -8572304 + L2 LINE L2 2518 2867 -447 22 35 0 0 chr17 80932285 80932314 -8572239 + AT_rich Low_complexity Low_complexity 1 29 0 2253 84 0 10 chr17 80932316 80932614 -8571939 + AluY SINE Alu 3 297 -14 2172 122 0 0 chr17 80932624 80932935 -8571618 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr17 80932935 80932956 -8571597 + AT_rich Low_complexity Low_complexity 1 21 0 1064 103 0 7 chr17 80932956 80933102 -8571451 - AluSq/x SINE Alu -168 145 1 22 0 0 0 chr17 80933289 80933311 -8571242 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr17 80933355 80933392 -8571161 + (TA)n Simple_repeat Simple_repeat 2 38 0 32 43 0 0 chr17 80933394 80933440 -8571113 + GC_rich Low_complexity Low_complexity 1 46 0 2083 56 0 30 chr17 80933440 80933709 -8570844 - AluY SINE Alu -50 261 1 2187 116 0 3 chr17 80934102 80934412 -8570141 + AluY SINE Alu 1 309 -2 191 114 29 0 chr17 80934611 80934646 -8569907 + CT-rich Low_complexity Low_complexity 1 36 0 1778 173 16 0 chr17 80934686 80934992 -8569561 + AluJb SINE Alu 1 311 -1 312 186 88 0 chr17 80935001 80935103 -8569450 - L1ME LINE L1 -678 5488 5378 1797 161 0 17 chr17 80935454 80935745 -8568808 + AluJo SINE Alu 1 286 -26 216 143 0 0 chr17 80935748 80935790 -8568763 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 2107 110 0 19 chr17 80935795 80936103 -8568450 + AluSx SINE Alu 1 302 -10 404 186 70 0 chr17 80936181 80936267 -8568286 + MIR SINE MIR 69 160 -102 2273 71 0 0 chr17 80936327 80936607 -8567946 - AluSg SINE Alu -30 280 1 236 255 117 11 chr17 80936701 80936795 -8567758 + L2 LINE L2 3169 3272 0 29 70 0 0 chr17 80937316 80937373 -8567180 + GC_rich Low_complexity Low_complexity 1 57 0 1288 166 35 9 chr17 80941643 80941872 -8562681 - MER46A DNA MER2_type 0 236 2 21 0 0 0 chr17 80942975 80942996 -8561557 + AT_rich Low_complexity Low_complexity 1 21 0 423 328 26 32 chr17 80944013 80944202 -8560351 + MER5A DNA MER1_type 2 189 0 186 305 158 32 chr17 80946294 80946484 -8558069 + L2 LINE L2 3058 3271 -1 2095 151 0 0 chr17 80950127 80950438 -8554115 + AluJb SINE Alu 1 311 -1 2035 149 7 0 chr17 80950518 80950820 -8553733 + AluSx SINE Alu 1 304 -8 1786 130 33 47 chr17 80950829 80951128 -8553425 + AluJo SINE Alu 1 295 -17 186 290 65 54 chr17 80951300 80951393 -8553160 - MIR SINE MIR -149 113 20 2137 88 0 37 chr17 80952560 80952880 -8551673 - AluSx SINE Alu 0 309 1 264 284 134 0 chr17 80953826 80953953 -8550600 - L2 LINE L2 -7 3306 3163 318 225 159 32 chr17 80954142 80954321 -8550232 + MIR SINE MIR 30 221 -41 298 234 0 13 chr17 80955322 80955399 -8549154 + MLT1C LTR MaLR 389 464 -3 180 125 0 0 chr17 80955744 80955776 -8548777 + (T)n Simple_repeat Simple_repeat 1 32 0 267 369 62 8 chr17 80959108 80959238 -8545315 - MIR3 SINE MIR -67 141 5 197 336 51 22 chr17 80960147 80960284 -8544269 - L3 LINE CR1 -125 1452 1312 2216 108 0 0 chr17 80966378 80966675 -8537878 - AluSx SINE Alu -15 297 1 218 296 42 28 chr17 80966695 80966766 -8537787 - MIR SINE MIR -153 109 38 529 198 112 64 chr17 80968105 80968205 -8536348 - MER33 DNA MER1_type -2353 232 138 1903 96 39 0 chr17 80968205 80968465 -8536088 - AluSx SINE Alu -13 299 30 529 198 112 64 chr17 80968465 80968551 -8536002 - MER33 DNA MER1_type -2447 138 37 183 343 154 17 chr17 80970130 80970363 -8534190 - L3 LINE CR1 -5 1572 1308 * 355 284 69 9 chr17 80970352 80970468 -8534085 + L2 LINE L2 3150 3272 0 263 137 0 20 chr17 80971257 80971308 -8533245 + (TTCC)n Simple_repeat Simple_repeat 1 50 0 198 0 0 0 chr17 80972095 80972117 -8532436 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2008 90 34 0 chr17 80972124 80972392 -8532161 - AluSx SINE Alu -35 277 1 1282 171 41 16 chr17 80978687 80978933 -8525620 + AluJo SINE Alu 48 299 -13 466 301 169 13 chr17 80980376 80980612 -8523941 - L2 LINE L2 -4 3309 3037 196 326 79 0 chr17 80981520 80981609 -8522944 - L2 LINE L2 -2 3270 3175 924 278 121 50 chr17 80981646 80982408 -8522145 - L2 LINE L2 0 3313 2607 1711 76 0 25 chr17 80982408 80982645 -8521908 - AluY SINE Alu -6 305 75 924 278 121 50 chr17 80982645 80982669 -8521884 - L2 LINE L2 -706 2607 2586 2221 95 0 10 chr17 80982669 80982965 -8521588 - AluSx SINE Alu -10 302 10 924 278 121 50 chr17 80982965 80983043 -8521510 - L2 LINE L2 -727 2586 2381 629 300 126 36 chr17 80983051 80983433 -8521120 - L2 LINE L2 -1 3312 2966 2182 91 14 7 chr17 80983433 80983730 -8520823 + AluSx SINE Alu 1 299 -13 629 300 126 36 chr17 80983730 80983967 -8520586 - L2 LINE L2 -347 2966 1937 1943 106 12 70 chr17 80983982 80984313 -8520240 - AluSx SINE Alu 0 312 1 1789 142 3 45 chr17 80984351 80984660 -8519893 + AluSx SINE Alu 1 296 -16 1202 135 0 11 chr17 80985536 80985721 -8518832 + AluSp SINE Alu 129 311 -2 2027 129 0 13 chr17 80985732 80985868 -8518685 + AluSx SINE Alu 1 137 -175 2127 127 3 0 chr17 80985868 80986176 -8518377 + AluSx SINE Alu 1 309 -3 2027 129 0 13 chr17 80986176 80986342 -8518211 + AluSx SINE Alu 137 299 -13 2386 67 0 3 chr17 80986633 80986933 -8517620 - AluY SINE Alu -12 299 1 940 254 73 0 chr17 80987147 80987379 -8517174 - REP3 LTR ERV -35 527 279 887 108 0 114 chr17 80987379 80987545 -8517008 + AluJb SINE Alu 150 296 -16 988 198 125 36 chr17 80987576 80987824 -8516729 - REP3 LTR ERV -292 270 1 180 0 0 0 chr17 80988458 80988478 -8516075 + (T)n Simple_repeat Simple_repeat 1 20 0 1751 157 20 10 chr17 80989799 80990093 -8514460 + AluJo SINE Alu 1 297 -15 1433 97 202 0 chr17 80990096 80990344 -8514209 + AluSg SINE Alu 3 300 -10 2035 123 3 0 chr17 80990629 80990922 -8513631 - AluSx SINE Alu -17 295 2 2719 56 18 0 chr17 80990976 80991314 -8513239 + LTR14A LTR ERVK 1 344 0 1736 74 27 39 chr17 80991314 80991498 -8513055 + HERVK14 LTR ERVK 1 183 -5762 2443 42 3 22 chr17 80991498 80991810 -8512743 - AluY SINE Alu -5 306 1 1736 74 27 39 chr17 80991810 80991883 -8512670 + HERVK14 LTR ERVK 183 255 -5690 * 9083 69 9 1 chr17 80991864 80993071 -8511482 + HERVK14 LTR ERVK 186 1402 -4543 2210 101 23 0 chr17 80995061 80995367 -8509186 + AluSp SINE Alu 1 313 0 2053 124 7 3 chr17 80995377 80995684 -8508869 + AluJo SINE Alu 1 308 -4 2136 82 31 3 chr17 80995792 80996083 -8508470 + AluY SINE Alu 1 299 -12 1753 141 7 14 chr17 80997169 80997446 -8507107 - AluJo SINE Alu -26 286 12 1494 182 23 11 chr17 80997446 80997710 -8506843 - AluJo SINE Alu -45 267 1 2301 71 3 3 chr17 80997725 80998019 -8506534 - AluSg SINE Alu -16 294 1 2040 128 7 0 chr17 80998021 80998319 -8506234 - AluSg SINE Alu -10 300 1 1593 131 50 32 chr17 80998327 80998610 -8505943 - AluJo SINE Alu -24 288 1 24 32 0 0 chr17 80998614 80998645 -8505908 + AT_rich Low_complexity Low_complexity 1 31 0 317 217 104 35 chr17 80998894 80998969 -8505584 - L1ME4a LINE L1 -67 6054 5967 2360 86 0 0 chr17 80998969 80999273 -8505280 - AluSg1 SINE Alu -5 304 1 317 217 104 35 chr17 80999273 80999312 -8505241 - L1ME4a LINE L1 -154 5967 5932 2323 75 7 0 chr17 80999348 80999641 -8504912 - AluSq SINE Alu -18 295 1 232 226 0 19 chr17 80999793 80999846 -8504707 + (TATG)n Simple_repeat Simple_repeat 3 54 0 309 259 139 15 chr17 81001000 81001168 -8503385 - MIR SINE MIR -48 214 23 253 164 173 19 chr17 81003639 81003709 -8500844 - Charlie5 DNA MER1_type -5 2580 2522 2219 96 3 0 chr17 81003709 81004010 -8500543 + AluSx SINE Alu 1 302 -10 253 164 173 19 chr17 81004010 81004043 -8500510 - Charlie5 DNA MER1_type -63 2522 2461 356 221 13 0 chr17 81004717 81004794 -8499759 - L2 LINE L2 -2 3311 3234 2091 82 0 4 chr17 81004818 81005099 -8499454 + AluSg SINE Alu 2 281 -29 8913 48 18 1 chr17 81005145 81006198 -8498355 + MER11C LTR ERVK 1 1071 0 2123 108 0 16 chr17 81006557 81006694 -8497859 + AluSx SINE Alu 1 139 -173 2773 16 0 0 chr17 81006694 81007007 -8497546 + AluYb8 SINE Alu 1 313 -5 2123 108 0 16 chr17 81007007 81007175 -8497378 + AluSx SINE Alu 139 301 -11 2094 119 3 3 chr17 81007565 81007868 -8496685 - AluSx SINE Alu -9 303 1 1939 131 3 3 chr17 81007962 81008259 -8496294 - AluSx SINE Alu -15 297 1 739 136 0 0 chr17 81008298 81008408 -8496145 - AluSg/x SINE Alu -11 299 190 1433 95 0 0 chr17 81009246 81009435 -8495118 - 7SLRNA srpRNA srpRNA -88 232 44 1232 167 4 76 chr17 81009537 81009812 -8494741 - AluJb SINE Alu 0 312 58 1902 134 17 3 chr17 81009822 81010121 -8494432 - AluSx SINE Alu -9 303 1 316 253 36 12 chr17 81010216 81010294 -8494259 - L2 LINE L2 -2 3311 3231 2281 87 0 0 chr17 81010294 81010594 -8493959 - AluSx SINE Alu -12 300 1 371 290 94 7 chr17 81010724 81010862 -8493691 - MIR3 SINE MIR -44 164 15 497 234 33 29 chr17 81011192 81011385 -8493168 + L1ME1 LINE L1 5790 5999 -179 520 211 0 0 chr17 81011387 81011496 -8493057 + L1MA10 LINE L1 6226 6334 0 1705 168 0 27 chr17 81011874 81012172 -8492381 - AluJo SINE Alu -22 290 1 316 358 64 17 chr17 81012172 81012345 -8492208 - L1MC4 LINE L1 -204 7838 7658 246 285 31 46 chr17 81012368 81012498 -8492055 - L1MC5 LINE L1 -532 7429 7302 1601 169 16 52 chr17 81012707 81012878 -8491675 - AluJb SINE Alu -16 296 139 2336 92 0 13 chr17 81012878 81013194 -8491359 - AluSx SINE Alu 0 312 1 1601 169 16 52 chr17 81013194 81013329 -8491224 - AluJb SINE Alu -173 139 1 225 114 0 0 chr17 81013427 81013462 -8491091 + MIR SINE MIR 114 148 -60 185 318 102 0 chr17 81014553 81014641 -8489912 - L2 LINE L2 -37 3235 3139 524 269 47 29 chr17 81014792 81014963 -8489590 - MIR SINE MIR -71 191 18 239 294 88 22 chr17 81015026 81015162 -8489391 - L2 LINE L2 -182 3090 2946 1969 124 3 22 chr17 81015162 81015297 -8489256 + AluJb SINE Alu 5 141 -171 2044 130 3 7 chr17 81015297 81015605 -8488948 + AluSx SINE Alu 3 309 -3 1969 124 3 22 chr17 81015605 81015783 -8488770 + AluJb SINE Alu 141 312 0 248 221 0 15 chr17 81019103 81019171 -8485382 + C-rich Low_complexity Low_complexity 4 70 0 184 306 0 0 chr17 81019501 81019550 -8485003 - MIR SINE MIR -74 188 140 492 183 99 0 chr17 81019565 81019696 -8484857 - LTR16C LTR ERVL -71 420 277 562 310 18 40 chr17 81021858 81022084 -8482469 - MIR SINE MIR 0 262 42 409 167 0 0 chr17 81022168 81022234 -8482319 + AluJ/FLAM SINE Alu 1 66 -236 1293 118 0 0 chr17 81022234 81022420 -8482133 + AluY SINE Alu 110 295 -16 363 271 136 0 chr17 81022456 81022574 -8481979 + L2 LINE L2 3138 3271 -1 383 240 19 19 chr17 81023163 81023267 -8481286 - MIR SINE MIR -112 150 47 315 264 23 0 chr17 81023386 81023473 -8481080 + L2 LINE L2 3136 3224 -48 392 277 15 0 chr17 81023841 81023951 -8480602 + MER33 DNA MER1_type 1 100 -97 835 156 0 15 chr17 81023954 81024089 -8480464 + FLAM_C SINE Alu 1 133 0 1644 146 27 44 chr17 81024097 81024433 -8480120 + AluSx SINE Alu 1 331 0 21 0 0 0 chr17 81024499 81024520 -8480033 + AT_rich Low_complexity Low_complexity 1 21 0 986 180 6 0 chr17 81024523 81024706 -8479847 + AluSx SINE Alu 1 184 -128 11934 58 13 6 chr17 81024809 81025166 -8479387 + HERVK14 LTR ERVK 1463 1816 -4129 4969 77 54 1 chr17 81025166 81025819 -8478734 + LTR12 LTR ERV1 2 688 0 11934 58 13 6 chr17 81025819 81025926 -8478627 + HERVK14 LTR ERVK 1816 1921 -4024 2088 117 0 10 chr17 81025926 81026226 -8478327 + AluY SINE Alu 2 298 -13 11934 58 13 6 chr17 81026226 81027314 -8477239 + HERVK14 LTR ERVK 1921 3027 -2918 * 16252 47 13 16 chr17 81027307 81028248 -8476305 + HERVK14 LTR ERVK 3626 4568 -1377 2494 55 7 0 chr17 81028248 81028555 -8475998 + AluY SINE Alu 1 309 -2 16252 47 13 16 chr17 81028555 81029195 -8475358 + HERVK14 LTR ERVK 4568 5202 -743 2279 74 0 32 chr17 81029195 81029505 -8475048 - AluSp SINE Alu -13 300 1 16252 47 13 16 chr17 81029505 81030062 -8474491 + HERVK14 LTR ERVK 5202 5759 -186 285 226 0 16 chr17 81030062 81030124 -8474429 + MER41C LTR ERV1 1 61 -493 875 55 0 31 chr17 81030124 81030252 -8474301 + HERVK14 LTR ERVK 5822 5945 0 2877 55 0 0 chr17 81030255 81030599 -8473954 + LTR14A LTR ERVK 1 344 0 380 113 0 113 chr17 81030859 81030895 -8473658 + U6 snRNA snRNA 2 29 -78 2093 83 0 28 chr17 81030895 81031204 -8473349 + AluY SINE Alu 2 302 0 380 113 0 113 chr17 81031204 81031237 -8473316 + U6 snRNA snRNA 29 64 -43 460 232 100 105 chr17 81031716 81031835 -8472718 + MIR SINE MIR 14 133 -129 2077 125 16 0 chr17 81031835 81032140 -8472413 - AluSx SINE Alu -2 310 1 460 232 100 105 chr17 81032140 81032210 -8472343 + MIR SINE MIR 133 202 -60 21 0 0 0 chr17 81033187 81033208 -8471345 + AT_rich Low_complexity Low_complexity 1 21 0 879 97 0 76 chr17 81033210 81033354 -8471199 - FLAM_C SINE Alu 0 133 1 616 42 0 0 chr17 81033983 81034055 -8470498 + tRNA-Arg-AGG tRNA tRNA 1 72 -4 586 41 0 14 chr17 81034509 81034582 -8469971 - tRNA-Arg-AGG tRNA tRNA -4 72 1 407 92 92 0 chr17 81034933 81034998 -8469555 - tRNA-Arg-CGA tRNA tRNA -5 71 1 541 31 0 0 chr17 81035192 81035256 -8469297 + tRNA-Arg-CGA tRNA tRNA 1 64 -12 219 311 25 49 chr17 81036929 81037051 -8467502 + L3b LINE CR1 1286 1404 -179 2370 47 3 10 chr17 81037878 81038176 -8466377 - AluY SINE Alu -15 296 1 469 261 138 0 chr17 81038187 81038325 -8466228 + L2 LINE L2 3116 3272 0 2166 106 20 0 chr17 81038436 81038738 -8465815 - AluSg SINE Alu -1 309 2 194 204 41 0 chr17 81038922 81038971 -8465582 - L2 LINE L2 -85 3187 3137 274 274 19 57 chr17 81039230 81039336 -8465217 - MIR SINE MIR -1 261 160 273 309 124 0 chr17 81039384 81039481 -8465072 + L3b LINE CR1 1304 1412 -171 2075 122 0 0 chr17 81040503 81040515 -8464038 - AluSx SINE Alu -17 295 284 594 60 0 0 chr17 81040515 81040598 -8463955 + (TTATG)n Simple_repeat Simple_repeat 3 85 0 2075 122 0 0 chr17 81040598 81040880 -8463673 - AluSx SINE Alu -27 285 1 670 149 0 8 chr17 81040896 81041017 -8463536 - L1ME3A LINE L1 -5 6165 6046 893 126 69 17 chr17 81041024 81041199 -8463354 + L1MB3 LINE L1 6000 6183 0 840 180 66 49 chr17 81041199 81041382 -8463171 + AluJo SINE Alu 120 305 -7 598 234 0 0 chr17 81041458 81041582 -8462971 - FLAM_A SINE Alu -4 138 15 2306 81 0 13 chr17 81041585 81041892 -8462661 - AluY SINE Alu -8 303 1 955 220 75 25 chr17 81041893 81041925 -8462628 - L1ME3A LINE L1 -236 5934 5905 2212 188 65 12 chr17 81041925 81042405 -8462148 + MLT1D LTR MaLR 1 505 0 955 220 75 25 chr17 81042405 81042713 -8461840 - L1ME3A LINE L1 -265 5905 5577 953 269 35 57 chr17 81042713 81043085 -8461468 + LTR16A LTR ERVL 34 397 -53 369 145 14 0 chr17 81043120 81043189 -8461364 + LTR16A LTR ERVL 381 450 0 2109 114 7 3 chr17 81043224 81043523 -8461030 - AluSx SINE Alu -10 302 3 1036 239 3 51 chr17 81043524 81043622 -8460931 - L1ME3A LINE L1 -586 5578 5477 1844 150 3 31 chr17 81043622 81043942 -8460611 - AluJo SINE Alu -1 311 1 1036 239 3 51 chr17 81043942 81044202 -8460351 - L1ME3A LINE L1 -687 5477 5237 190 263 80 95 chr17 81044490 81044538 -8460015 - L2 LINE L2 0 3313 3266 1944 91 44 4 chr17 81044538 81044837 -8459716 - AluSx SINE Alu 0 310 1 190 263 80 95 chr17 81044837 81044924 -8459629 - L2 LINE L2 -47 3266 3179 351 44 0 0 chr17 81046912 81046957 -8457596 + (CA)n Simple_repeat Simple_repeat 2 46 0 209 361 0 0 chr17 81046995 81047056 -8457497 - L2 LINE L2 -9 3304 3244 2087 91 56 0 chr17 81047133 81047440 -8457113 - AluSx SINE Alu 0 312 1 226 269 221 29 chr17 81047893 81047997 -8456556 - L2 LINE L2 -30 3283 3160 2277 75 7 13 chr17 81048621 81048926 -8455627 + AluSp SINE Alu 1 303 -10 2517 59 0 0 chr17 81048936 81049242 -8455311 + AluY SINE Alu 1 306 -5 1292 146 15 5 chr17 81050781 81050987 -8453566 - AluSg/x SINE Alu -15 295 88 1360 197 12 72 chr17 81052108 81052315 -8452238 - AluJo SINE Alu -11 301 118 2117 80 0 7 chr17 81052315 81052589 -8451964 + AluSc SINE Alu 28 299 -10 1360 197 12 72 chr17 81052589 81052701 -8451852 - AluJo SINE Alu -194 118 1 423 139 28 0 chr17 81052706 81052778 -8451775 - AluJo SINE Alu -6 306 233 1154 155 17 0 chr17 81052778 81052959 -8451594 - AluJo SINE Alu -128 184 1 2158 120 13 0 chr17 81052991 81053299 -8451254 - AluSx SINE Alu 0 312 1 807 129 0 7 chr17 81053494 81053633 -8450920 - L1MB8 LINE L1 0 6178 6041 2248 119 0 0 chr17 81053658 81053970 -8450583 + AluSx SINE Alu 1 312 0 417 340 73 0 chr17 81054330 81054480 -8450073 + MIR3 SINE MIR 32 192 -16 2139 99 3 0 chr17 81054529 81054874 -8449679 - AluSx SINE Alu 0 346 1 286 310 40 0 chr17 81055004 81055104 -8449449 - L2 LINE L2 0 3313 3210 826 137 16 0 chr17 81055104 81055228 -8449325 + FLAM_C SINE Alu 2 127 -16 1034 99 112 7 chr17 81055243 81055395 -8449158 + AluSq SINE Alu 3 170 -143 2229 57 0 24 chr17 81055437 81055733 -8448820 + AluY SINE Alu 3 291 -20 335 169 17 0 chr17 81055781 81055840 -8448713 - FAM SINE Alu -60 115 56 229 139 0 0 chr17 81055866 81055909 -8448644 - Alu SINE Alu 0 133 91 684 150 125 0 chr17 81055910 81056030 -8448523 + FAM SINE Alu 40 174 -11 474 301 89 12 chr17 81056030 81056276 -8448277 - L2 LINE L2 -97 3216 2952 309 26 0 0 chr17 81056786 81056824 -8447729 + (CA)n Simple_repeat Simple_repeat 1 38 0 884 133 0 22 chr17 81057305 81057440 -8447113 - FLAM_C SINE Alu -1 132 1 1682 152 72 0 chr17 81057522 81057799 -8446754 + AluJb SINE Alu 13 309 -3 2273 77 0 10 chr17 81057799 81058096 -8446457 - AluY SINE Alu -16 295 2 2276 85 0 22 chr17 81058132 81058450 -8446103 + AluY SINE Alu 1 311 0 2039 153 0 0 chr17 81058456 81058763 -8445790 + AluSx SINE Alu 6 312 0 354 361 4 78 chr17 81059144 81059388 -8445165 - L2 LINE L2 -3 3269 3044 488 303 164 0 chr17 81059857 81060065 -8444488 - MIR SINE MIR -1 261 20 588 238 104 0 chr17 81060135 81060328 -8444225 - LTR33 LTR ERVL 0 521 309 428 245 57 52 chr17 81060365 81060557 -8443996 - LTR33 LTR ERVL -312 209 17 353 264 28 19 chr17 81063438 81063544 -8441009 - L2 LINE L2 -60 3253 3147 1800 144 21 11 chr17 81063634 81063919 -8440634 + AluJo SINE Alu 1 288 -24 338 164 112 97 chr17 81063931 81064065 -8440488 + MER106B DNA MER1_type 923 1058 -1 1680 111 122 7 chr17 81064629 81064899 -8439654 + AluSg SINE Alu 1 301 -9 1261 74 6 0 chr17 81064988 81065151 -8439402 + AluY SINE Alu 127 290 -21 1981 134 3 0 chr17 81065589 81065880 -8438673 + AluSx SINE Alu 1 292 -20 1735 116 0 71 chr17 81067216 81067510 -8437043 + AluSx SINE Alu 1 273 -39 1581 147 66 25 chr17 81067859 81068145 -8436408 - AluJo SINE Alu -14 298 1 482 256 101 18 chr17 81068669 81068837 -8435716 - MIR SINE MIR 0 262 81 1621 145 55 28 chr17 81068851 81069140 -8435413 + AluJb SINE Alu 1 297 -15 31 0 0 0 chr17 81069202 81069233 -8435320 + AT_rich Low_complexity Low_complexity 1 31 0 270 0 0 0 chr17 81069293 81069323 -8435230 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2000 131 0 7 chr17 81069325 81069607 -8434946 - AluSx SINE Alu -32 280 1 815 218 82 0 chr17 81069742 81069948 -8434605 - MER33 DNA MER1_type -101 223 1 317 247 0 0 chr17 81070353 81070426 -8434127 + MIR3 SINE MIR 101 173 -35 231 214 0 0 chr17 81073026 81073082 -8431471 - Charlie5 DNA MER1_type -151 2461 2406 2160 103 7 0 chr17 81073182 81073483 -8431070 - AluY SINE Alu -8 303 1 2280 92 0 0 chr17 81073882 81074188 -8430365 - AluY SINE Alu -5 306 1 1299 77 6 0 chr17 81074830 81074999 -8429554 + AluY SINE Alu 1 170 -141 1090 149 0 0 chr17 81075031 81075205 -8429348 + AluYa5 SINE Alu 134 307 -4 252 0 0 0 chr17 81075391 81075419 -8429134 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 465 227 189 54 chr17 81075576 81075736 -8428817 + L1MC5 LINE L1 7715 7905 -56 2147 113 7 0 chr17 81075736 81076036 -8428517 - AluSq SINE Alu -11 302 1 465 227 189 54 chr17 81076036 81076060 -8428493 + L1MC5 LINE L1 7905 7924 -37 315 0 0 0 chr17 81076716 81076751 -8427802 + (TG)n Simple_repeat Simple_repeat 2 36 0 406 308 47 44 chr17 81077310 81077514 -8427039 + MIR SINE MIR 18 226 -36 2206 68 16 45 chr17 81077550 81077861 -8426692 - AluY SINE Alu -9 302 1 2338 82 0 0 chr17 81077868 81078162 -8426391 - AluSx SINE Alu -18 294 1 2283 70 0 0 chr17 81129077 81129363 -8375190 + AluYa5 SINE Alu 1 286 -25 422 36 18 0 chr17 81129364 81129420 -8375133 + (TA)n Simple_repeat Simple_repeat 2 58 0 1051 142 6 0 chr17 81129617 81129779 -8374774 - FRAM SINE Alu -5 171 9 1991 124 0 0 chr17 81129805 81130115 -8374438 + AluSx SINE Alu 1 310 0 1921 135 0 3 chr17 81130120 81130417 -8374136 + AluSx SINE Alu 1 296 -16 2020 114 3 0 chr17 81130423 81130712 -8373841 + AluSg SINE Alu 3 292 -18 661 153 0 36 chr17 81130713 81130824 -8373729 - AluJo/FLAM SINE Alu -179 133 27 2078 114 3 10 chr17 81131428 81131736 -8372817 - AluSp SINE Alu -7 306 1 1320 187 46 11 chr17 81131924 81132208 -8372345 + AluJo SINE Alu 1 294 -18 512 322 0 33 chr17 81132443 81132626 -8371927 - MER5B DNA MER1_type 0 178 2 2006 115 0 0 chr17 81132644 81132930 -8371623 - AluSg SINE Alu -24 286 1 1649 86 5 0 chr17 81132983 81133204 -8371349 + MER41B LTR ERV1 1 222 -413 1368 79 0 0 chr17 81133210 81133387 -8371166 + AluY SINE Alu 128 304 -7 383 148 16 0 chr17 81133387 81133448 -8371105 + MER41A LTR ERV1 370 431 -123 980 115 7 0 chr17 81133749 81133895 -8370658 - AluSg/x SINE Alu -15 294 154 273 286 0 0 chr17 81133879 81133949 -8370604 + AluJb SINE Alu 193 262 -40 * 787 198 35 64 chr17 81133937 81134139 -8370414 + AluJo SINE Alu 85 280 -32 248 167 83 0 chr17 81134159 81134219 -8370334 + Tigger1 DNA MER2_type 2232 2296 -122 1095 204 29 15 chr17 81134222 81134428 -8370125 - AluJb SINE Alu -18 294 86 663 174 0 41 chr17 81134428 81134549 -8370004 + Tigger1 DNA MER2_type 2302 2417 -1 2316 105 7 3 chr17 81134755 81135059 -8369494 + AluSx SINE Alu 3 307 -5 2433 80 0 3 chr17 81135062 81135364 -8369189 + AluY SINE Alu 1 301 -10 1418 94 0 11 chr17 81135366 81135547 -8369006 + AluSq SINE Alu 5 183 -130 2534 57 7 0 chr17 81135765 81136062 -8368491 + AluY SINE Alu 1 299 -12 2374 87 0 10 chr17 81136259 81136570 -8367983 + AluY SINE Alu 1 308 -3 1123 169 119 15 chr17 81136577 81136711 -8367842 + AluSx SINE Alu 1 120 -182 2038 138 3 16 chr17 81136711 81137022 -8367531 + AluSp SINE Alu 1 307 -6 1452 204 21 11 chr17 81137024 81137308 -8367245 + AluJb SINE Alu 1 287 -25 1123 169 119 15 chr17 81137308 81137431 -8367122 + AluSx SINE Alu 120 288 -14 1682 113 124 19 chr17 81137554 81137819 -8366734 + AluSq SINE Alu 1 293 -20 2230 111 17 7 chr17 81139125 81139422 -8365131 - AluSq SINE Alu -13 300 1 1452 195 3 48 chr17 81139455 81139768 -8364785 + AluJo SINE Alu 1 299 -13 896 144 0 0 chr17 81139774 81139899 -8364654 + AluSx SINE Alu 1 125 -188 1701 144 0 0 chr17 81139903 81140160 -8364393 - AluY SINE Alu -14 297 41 492 275 0 0 chr17 81140178 81140298 -8364255 + C-rich Low_complexity Low_complexity 1 120 0 832 135 0 23 chr17 81140445 81140578 -8363975 - AluYb8 SINE Alu -188 130 1 1206 138 0 0 chr17 81140592 81140759 -8363794 + AluSx SINE Alu 131 297 -15 1855 107 48 71 chr17 81140768 81141078 -8363475 + AluSx SINE Alu 1 303 -9 2293 115 0 0 chr17 81141185 81141489 -8363064 + AluSc SINE Alu 1 304 -5 1907 91 0 16 chr17 81141512 81141765 -8362788 + AluSg SINE Alu 50 298 -12 1289 114 6 0 chr17 81142019 81142195 -8362358 - AluSp SINE Alu -7 306 130 1306 112 0 16 chr17 81142245 81142432 -8362121 + AluSg/x SINE Alu 122 305 -7 1723 128 16 70 chr17 81142907 81143219 -8361334 - AluSx SINE Alu -15 297 3 1818 145 19 52 chr17 81143221 81143383 -8361170 - AluSx SINE Alu -12 300 151 2211 66 52 3 chr17 81143383 81143669 -8360884 - AluSp SINE Alu -12 301 2 1818 145 19 52 chr17 81143669 81143816 -8360737 - AluSx SINE Alu -161 151 1 1572 199 14 14 chr17 81144067 81144349 -8360204 - AluJo SINE Alu -20 292 11 1561 177 7 7 chr17 81144373 81144650 -8359903 - AluJb SINE Alu -15 297 21 2021 143 0 7 chr17 81145002 81145302 -8359251 + AluSx SINE Alu 1 298 -14 402 187 19 37 chr17 81145352 81145459 -8359094 + AluJb SINE Alu 208 312 0 2006 123 13 7 chr17 81145878 81146178 -8358375 - AluSq SINE Alu -11 302 1 2279 114 7 3 chr17 81146209 81146515 -8358038 - AluSx SINE Alu -5 307 1 2333 122 0 0 chr17 81146517 81146828 -8357725 - AluSx SINE Alu -1 311 1 1621 135 12 0 chr17 81146943 81147188 -8357365 - AluY SINE Alu -19 292 45 1875 131 22 0 chr17 81147236 81147504 -8357049 + AluSx SINE Alu 3 276 -36 183 42 0 0 chr17 81147509 81147533 -8357020 + (CAA)n Simple_repeat Simple_repeat 1 24 0 196 294 185 34 chr17 81147634 81147753 -8356800 + L2 LINE L2 3172 3308 -5 1834 133 60 18 chr17 81147797 81148082 -8356471 + AluSx SINE Alu 1 297 -15 1255 115 11 6 chr17 81148099 81148282 -8356271 + AluSg/x SINE Alu 120 303 -9 2090 137 7 13 chr17 81148292 81148599 -8355954 + AluSq SINE Alu 1 305 -8 2197 115 13 26 chr17 81148599 81148910 -8355643 + AluSx SINE Alu 1 308 -4 800 206 0 36 chr17 81148912 81149077 -8355476 + AluJo/FRAM SINE Alu 142 300 -12 2345 82 13 7 chr17 81149128 81149431 -8355122 + AluSc SINE Alu 1 305 -4 927 226 32 0 chr17 81149462 81149652 -8354901 - AluJ SINE Alu -10 302 107 469 103 0 0 chr17 81149656 81149724 -8354829 + Alu SINE Alu 2 69 -241 1060 118 0 0 chr17 81149724 81149868 -8354685 + AluSp/q SINE Alu 157 300 -13 306 121 379 0 chr17 81149870 81149936 -8354617 - AluJ SINE Alu -187 115 25 2251 121 3 0 chr17 81150143 81150441 -8354112 + AluSx SINE Alu 2 300 -12 1618 164 59 11 chr17 81150555 81150841 -8353712 - AluSg SINE Alu -10 300 1 1691 128 109 0 chr17 81150955 81151229 -8353324 + AluSx SINE Alu 1 304 -8 261 0 0 0 chr17 81151288 81151317 -8353236 + (A)n Simple_repeat Simple_repeat 1 29 0 2113 117 27 17 chr17 81151331 81151631 -8352922 + AluSq SINE Alu 6 308 -5 21 36 0 0 chr17 81151697 81151725 -8352828 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr17 81153531 81153557 -8350996 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 23 78 0 0 chr17 81153562 81153613 -8350940 + GC_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr17 81154037 81154060 -8350493 + GC_rich Low_complexity Low_complexity 1 23 0 2417 66 30 0 chr17 81154344 81154645 -8349908 - AluY SINE Alu -1 310 1 825 323 184 13 chr17 81154968 81155678 -8348875 + L2 LINE L2 1698 2529 -785 2487 73 10 0 chr17 81155828 81156129 -8348424 + AluSp SINE Alu 1 304 -9 928 73 0 0 chr17 81156154 81156264 -8348289 + AluSq/x SINE Alu 1 110 -203 878 60 0 0 chr17 81156267 81156367 -8348186 + AluSq/x SINE Alu 11 110 -202 2268 105 0 20 chr17 81156370 81156675 -8347878 + AluSx SINE Alu 11 309 -3 322 93 0 0 chr17 81156734 81156788 -8347765 - Alu SINE Alu -2 299 246 2438 73 0 10 chr17 81156993 81157295 -8347258 - AluSq SINE Alu -14 299 1 2223 96 0 0 chr17 81157508 81157788 -8346765 - AluSq SINE Alu -33 280 1 1010 107 0 0 chr17 81157790 81157921 -8346632 - AluSq/x SINE Alu -181 132 2 189 107 0 0 chr17 81158021 81158049 -8346504 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 628 142 85 0 chr17 81158248 81158354 -8346199 + FLAM_C SINE Alu 2 116 -27 225 0 0 0 chr17 81158359 81158384 -8346169 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1067 194 15 63 chr17 81158386 81158479 -8346074 + L1MC2 LINE L1 5660 5756 -412 2252 97 0 17 chr17 81158479 81158777 -8345776 - AluSg SINE Alu -17 293 1 1067 194 15 63 chr17 81158777 81158987 -8345566 + L1MC2 LINE L1 5756 5943 -225 862 134 0 22 chr17 81159049 81159183 -8345370 + FLAM_C SINE Alu 11 141 -2 2479 61 10 0 chr17 81159183 81159476 -8345077 + AluY SINE Alu 1 296 -15 344 244 63 31 chr17 81159486 81159613 -8344940 - MIR3 SINE MIR -2 206 76 2261 111 16 0 chr17 81160498 81160805 -8343748 - AluSx SINE Alu 0 312 1 2328 112 0 0 chr17 81160817 81161111 -8343442 - AluSq SINE Alu -18 295 2 905 200 24 47 chr17 81161206 81161461 -8343092 + L1M4 LINE L1 4850 5098 -1048 880 174 163 37 chr17 81161463 81161653 -8342900 + AluJo SINE Alu 1 214 -98 599 137 29 10 chr17 81161653 81161755 -8342798 - AluSq/x SINE Alu -207 105 2 234 0 0 0 chr17 81161870 81161896 -8342657 + (A)n Simple_repeat Simple_repeat 1 26 0 2372 92 7 0 chr17 81161900 81162194 -8342359 + AluSx SINE Alu 1 296 -16 2077 140 0 26 chr17 81162197 81162505 -8342048 + AluSx SINE Alu 1 300 -12 2185 123 0 10 chr17 81162505 81162806 -8341747 + AluSg SINE Alu 1 298 -12 1930 154 7 3 chr17 81162818 81163111 -8341442 + AluJb SINE Alu 1 294 -18 441 172 5 172 chr17 81163112 81163179 -8341374 + L1MC5 LINE L1 7308 7384 -577 2214 136 0 0 chr17 81163179 81163489 -8341064 + AluSx SINE Alu 1 310 -2 441 172 5 172 chr17 81163489 81163619 -8340934 + L1MC5 LINE L1 7384 7472 -489 821 203 12 0 chr17 81163623 81163786 -8340767 - FAM SINE Alu -10 165 1 278 227 0 31 chr17 81163801 81163898 -8340655 + A-rich Low_complexity Low_complexity 2 95 0 2232 113 10 0 chr17 81163953 81164246 -8340307 - AluSx SINE Alu -16 296 1 2404 57 40 3 chr17 81164314 81164611 -8339942 + AluY SINE Alu 1 308 -3 2288 111 0 3 chr17 81164633 81164931 -8339622 + AluSx SINE Alu 1 297 -15 1696 106 8 4 chr17 81164931 81165167 -8339386 + AluSp SINE Alu 76 313 0 498 273 45 36 chr17 81165311 81165531 -8339022 + L1MC5 LINE L1 7705 7926 -35 201 274 51 128 chr17 81167213 81167447 -8337106 - L2 LINE L2 -231 3041 2826 2227 110 0 0 chr17 81167482 81167799 -8336754 - AluSx SINE Alu 0 312 1 555 233 38 62 chr17 81168089 81168257 -8336296 - L2 LINE L2 -1 3312 3148 1762 149 38 7 chr17 81168257 81168545 -8336008 + AluJo SINE Alu 2 298 -14 555 233 38 62 chr17 81168545 81168586 -8335967 - L2 LINE L2 -165 3148 3108 947 134 8 0 chr17 81168607 81168741 -8335812 - AluJo SINE Alu -177 135 1 385 183 0 0 chr17 81168743 81168814 -8335739 - L2 LINE L2 -231 3082 3012 252 320 0 0 chr17 81169729 81169804 -8334749 - MIR SINE MIR -90 118 44 512 300 68 23 chr17 81169866 81170086 -8334467 - MIR SINE MIR -2 260 31 247 139 0 0 chr17 81170248 81170284 -8334269 + AluJo SINE Alu 1 36 -267 626 124 0 0 chr17 81170286 81170383 -8334170 + AluJb SINE Alu 201 297 -15 1660 164 21 14 chr17 81170435 81170715 -8333838 + AluJo SINE Alu 12 293 -19 2082 160 0 3 chr17 81170718 81171031 -8333522 + AluJb SINE Alu 1 312 0 2388 98 0 0 chr17 81171242 81171538 -8333015 - AluSg SINE Alu -14 296 1 2075 121 3 7 chr17 81171538 81171827 -8332726 - AluSg SINE Alu -22 288 1 203 0 37 0 chr17 81172304 81172331 -8332222 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2348 74 0 7 chr17 81172332 81172643 -8331910 - AluY SINE Alu 0 309 1 212 0 36 0 chr17 81172643 81172671 -8331882 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 397 60 0 0 chr17 81172671 81172721 -8331832 - AluSc SINE Alu -19 280 231 23 33 0 0 chr17 81172748 81172778 -8331775 + AT_rich Low_complexity Low_complexity 1 30 0 2425 71 13 7 chr17 81172778 81173087 -8331466 - AluY SINE Alu 0 311 1 2238 102 7 10 chr17 81173089 81173392 -8331161 - AluSq SINE Alu -11 302 1 1796 133 63 0 chr17 81173402 81173672 -8330881 - AluJb SINE Alu -24 288 2 2169 124 6 19 chr17 81173931 81174246 -8330307 - AluSx SINE Alu -1 311 1 1352 158 12 55 chr17 81174441 81174694 -8329859 - AluJo SINE Alu 0 312 71 1411 125 30 142 chr17 81174713 81174906 -8329647 - AluSx SINE Alu -1 301 161 1702 108 5 0 chr17 81174906 81175128 -8329425 - AluSg SINE Alu -87 223 1 1411 125 30 142 chr17 81175128 81175271 -8329282 - AluSx SINE Alu -141 161 3 1986 158 0 13 chr17 81175273 81175576 -8328977 - AluJb SINE Alu -13 299 1 1000 198 134 9 chr17 81175634 81175851 -8328702 + AluJb SINE Alu 54 297 -15 2126 125 3 3 chr17 81175854 81176158 -8328395 + AluSg SINE Alu 1 304 -6 360 208 0 0 chr17 81176425 81176502 -8328051 - HAL1 LINE L1 -110 2397 2321 832 119 0 0 chr17 81176502 81176620 -8327933 + AluJo/FLAM SINE Alu 1 118 -184 2177 111 0 3 chr17 81176621 81176960 -8327593 - AluSx SINE Alu 0 338 1 279 302 104 22 chr17 81176971 81177153 -8327400 - L1MC/D LINE L1 -1992 5816 5620 588 134 143 34 chr17 81178531 81178650 -8325903 - FLAM_C SINE Alu 0 133 2 2356 70 0 30 chr17 81178677 81178976 -8325577 + AluY SINE Alu 1 290 -21 1983 134 0 0 chr17 81178996 81179264 -8325289 + AluSx SINE Alu 5 272 -40 210 67 0 0 chr17 81179346 81179360 -8325193 + (TA)n Simple_repeat Simple_repeat 1 14 -16 2517 65 7 3 chr17 81179360 81179666 -8324887 - AluSq SINE Alu -6 307 1 210 67 0 0 chr17 81179666 81179681 -8324872 + (TA)n Simple_repeat Simple_repeat 13 30 0 2014 86 17 66 chr17 81179681 81179983 -8324570 - AluSq SINE Alu -24 289 3 375 284 108 27 chr17 81180298 81180365 -8324188 - L1ME4a LINE L1 -12 6109 6049 2206 130 0 13 chr17 81180365 81180681 -8323872 + AluJo SINE Alu 1 312 0 375 284 108 27 chr17 81180681 81180835 -8323718 - L1ME4a LINE L1 -72 6049 5870 797 165 0 0 chr17 81180864 81180997 -8323556 - FLAM_A SINE Alu 0 133 1 2199 130 0 3 chr17 81181596 81181897 -8322656 + AluSx SINE Alu 1 300 -12 22 70 0 0 chr17 81184463 81184506 -8320047 + GC_rich Low_complexity Low_complexity 1 43 0 1774 146 3 58 chr17 81185773 81186102 -8318451 + AluJb SINE Alu 1 311 -1 2111 93 10 23 chr17 81186624 81186934 -8317619 - AluSq SINE Alu -7 306 1 2244 100 0 25 chr17 81186948 81187268 -8317285 - AluSx SINE Alu 0 312 1 225 305 199 0 chr17 81188484 81188625 -8315928 + MIR SINE MIR 73 241 -21 262 129 125 41 chr17 81189145 81189224 -8315329 + MIR SINE MIR 70 155 -63 882 126 0 30 chr17 81190177 81190312 -8314241 + AluJo/FLAM SINE Alu 3 133 -169 2175 111 13 0 chr17 81190312 81190619 -8313934 + AluSx SINE Alu 1 311 -1 1312 103 0 73 chr17 81190756 81190990 -8313563 + AluSq SINE Alu 97 313 0 237 317 72 33 chr17 81191035 81191215 -8313338 - L2 LINE L2 -9 3304 3118 * 254 367 46 0 chr17 81191206 81191315 -8313238 - L2 LINE L2 -9 3263 3150 1889 126 38 0 chr17 81191455 81191748 -8312805 - AluSx SINE Alu -8 304 1 1663 149 17 14 chr17 81191749 81192045 -8312508 - AluJo SINE Alu -10 302 6 180 293 133 13 chr17 81193515 81193590 -8310963 - MIR SINE MIR -106 102 19 1726 173 7 10 chr17 81195476 81195782 -8308771 - AluJo SINE Alu -7 305 1 2217 64 0 3 chr17 81196417 81196699 -8307854 + AluY SINE Alu 22 302 -9 1850 166 0 7 chr17 81196956 81197264 -8307289 - AluSx SINE Alu -6 306 1 1452 176 110 61 chr17 81197368 81197795 -8306758 - LTR7 LTR ERV1 -2 448 1 2239 99 72 47 chr17 81197795 81198383 -8306170 - HERVH LTR ERV1 0 7713 5600 4162 143 11 1 chr17 81198384 81199040 -8305513 - HERVH LTR ERV1 -2564 5149 4488 3186 116 8 6 chr17 81199042 81199543 -8305010 - HERVH LTR ERV1 -3720 3993 3492 892 153 61 0 chr17 81199518 81199681 -8304872 - HERVH LTR ERV1 -4401 3312 3140 * 18903 94 43 19 chr17 81199675 81202592 -8301961 - HERVH LTR ERV1 -4726 2987 1 1444 167 111 72 chr17 81202594 81203025 -8301528 - LTR7 LTR ERV1 -2 448 1 1128 166 64 96 chr17 81203264 81203578 -8300975 + AluJb SINE Alu 9 312 0 1630 191 26 7 chr17 81203581 81203885 -8300668 + AluJb SINE Alu 2 311 -1 2147 113 0 3 chr17 81203917 81204218 -8300335 - AluSg SINE Alu -8 302 3 2074 102 3 14 chr17 81204553 81204848 -8299705 - AluSx SINE Alu -18 294 3 2089 136 3 0 chr17 81204863 81205165 -8299388 - AluSx SINE Alu -9 303 1 1800 100 36 25 chr17 81206303 81206604 -8297949 + AluSx SINE Alu 1 304 0 2265 93 6 0 chr17 81206830 81207141 -8297412 - AluSp SINE Alu 0 313 1 2436 56 10 0 chr17 81207151 81207455 -8297098 - AluY SINE Alu -4 307 1 2256 91 3 0 chr17 81208084 81208381 -8296172 + AluSp SINE Alu 2 299 -14 1539 206 13 3 chr17 81209823 81210129 -8294424 + AluJb SINE Alu 1 309 -3 1046 203 58 0 chr17 81210131 81210338 -8294215 + MER20 DNA MER1_type 1 219 0 195 221 117 52 chr17 81210581 81210658 -8293895 + MIR3 SINE MIR 111 192 -16 221 301 168 7 chr17 81213789 81213932 -8290621 + MIR3 SINE MIR 31 196 -12 749 96 104 40 chr17 81219307 81219432 -8285121 - FLAM_C SINE Alu 0 133 1 2030 126 10 7 chr17 81219495 81219797 -8284756 + AluSg SINE Alu 1 303 -7 257 263 0 0 chr17 81221185 81221261 -8283292 + L1MC4a LINE L1 6868 6943 -865 2240 99 0 19 chr17 81221272 81221584 -8282969 + AluSx SINE Alu 1 306 -6 1979 96 56 26 chr17 81221596 81221732 -8282821 + AluSx SINE Alu 1 131 -181 2317 87 0 0 chr17 81221732 81222041 -8282512 + AluY SINE Alu 1 309 -2 1979 96 56 26 chr17 81222041 81222207 -8282346 + AluSx SINE Alu 131 312 0 320 78 39 0 chr17 81222210 81222261 -8282292 + GA-rich Low_complexity Low_complexity 3 55 0 225 0 0 0 chr17 81222261 81222286 -8282267 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1727 169 10 10 chr17 81224398 81224693 -8279860 + AluJb SINE Alu 1 295 -17 987 153 0 0 chr17 81224708 81224858 -8279695 - AluSg/x SINE Alu -28 282 133 624 138 106 122 chr17 81224858 81224971 -8279582 + L1MA9 LINE L1 6127 6240 -72 2271 96 0 0 chr17 81224971 81225274 -8279279 + AluY SINE Alu 1 303 -8 624 138 106 122 chr17 81225274 81225289 -8279264 + L1MA9 LINE L1 6240 6254 -58 2030 125 10 0 chr17 81225289 81225585 -8278968 + AluSx SINE Alu 1 299 -13 624 138 106 122 chr17 81225585 81225644 -8278909 + L1MA9 LINE L1 6254 6312 0 1859 158 0 10 chr17 81227689 81227986 -8276567 + AluJb SINE Alu 1 294 -18 2225 96 0 16 chr17 81227989 81228303 -8276250 + AluSq SINE Alu 1 309 -4 1209 205 63 66 chr17 81228996 81229362 -8275191 + MLT1A1 LTR MaLR 1 365 0 2211 92 17 0 chr17 81230784 81231079 -8273474 - AluSq SINE Alu -13 300 1 2134 106 0 0 chr17 81231285 81231598 -8272955 + AluY SINE Alu 1 313 0 24 32 0 0 chr17 81231840 81231871 -8272682 + AT_rich Low_complexity Low_complexity 1 31 0 2240 111 0 0 chr17 81231942 81232249 -8272304 + AluSx SINE Alu 1 307 -5 407 273 78 3 chr17 81232267 81232465 -8272088 - MER82 DNA MER2_type -5 648 376 2102 118 3 3 chr17 81232645 81232950 -8271603 - AluSx SINE Alu -7 305 1 1488 152 19 30 chr17 81233008 81233277 -8271276 + AluJb SINE Alu 29 294 -18 2544 70 0 0 chr17 81233279 81233581 -8270972 + AluY SINE Alu 1 302 -9 453 321 76 11 chr17 81233723 81233907 -8270646 - L1ME4a LINE L1 -129 5992 5797 * 961 208 10 20 chr17 81233905 81234102 -8270451 - AluJb SINE Alu -13 299 105 1712 194 7 13 chr17 81233907 81234206 -8270347 - AluJb SINE Alu -15 297 1 298 141 74 141 chr17 81234231 81234352 -8270201 - L1MB7 LINE L1 -18 6166 6054 2148 115 7 16 chr17 81234352 81234657 -8269896 - AluSq SINE Alu -11 302 1 277 198 12 70 chr17 81234658 81234744 -8269809 - L1M3 LINE L1 -618 5548 5480 197 326 104 17 chr17 81234780 81235010 -8269543 + L2 LINE L2 2996 3245 -27 1747 102 95 0 chr17 81235464 81235748 -8268805 + MER1B DNA MER1_type 29 339 0 534 222 26 0 chr17 81235879 81235996 -8268557 - MLT1J LTR MaLR -333 178 59 2149 121 0 0 chr17 81235998 81236278 -8268275 + AluSx SINE Alu 1 280 -32 996 171 49 54 chr17 81236421 81236468 -8268085 + AluJo SINE Alu 94 140 -172 2296 107 0 3 chr17 81236468 81236768 -8267785 + AluSx SINE Alu 3 301 -11 996 171 49 54 chr17 81236768 81236916 -8267637 + AluJo SINE Alu 140 290 -22 189 0 0 0 chr17 81236916 81236937 -8267616 + (GA)n Simple_repeat Simple_repeat 2 22 0 1905 138 14 3 chr17 81237263 81237543 -8267010 + AluJb SINE Alu 1 286 -26 369 43 0 0 chr17 81237543 81237590 -8266963 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1090 185 0 6 chr17 81237600 81237778 -8266775 + AluJb SINE Alu 134 310 -2 1864 104 0 50 chr17 81237895 81238174 -8266379 - AluSq SINE Alu -48 265 1 366 281 0 10 chr17 81238176 81238272 -8266281 + L2 LINE L2 3219 3313 0 1541 176 67 25 chr17 81238327 81238611 -8265942 + AluJo SINE Alu 5 300 -12 346 217 87 0 chr17 81238611 81238680 -8265873 - MER5B DNA MER1_type -54 124 50 1655 199 0 7 chr17 81238695 81238987 -8265566 + AluJo SINE Alu 1 290 -22 2273 112 3 3 chr17 81238996 81239299 -8265254 - AluSq SINE Alu -10 303 1 2439 72 0 31 chr17 81239312 81239633 -8264920 - AluY SINE Alu 0 311 1 1161 162 15 5 chr17 81239644 81239841 -8264712 - AluSg/x SINE Alu -23 289 91 261 0 0 0 chr17 81239942 81239971 -8264582 + (A)n Simple_repeat Simple_repeat 1 29 0 2564 84 3 0 chr17 81240151 81240460 -8264093 - AluSp SINE Alu -3 310 1 1641 151 79 11 chr17 81240594 81240873 -8263680 - AluJb SINE Alu -14 298 1 189 0 0 0 chr17 81241128 81241149 -8263404 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2087 113 3 3 chr17 81241152 81241434 -8263119 - AluSq SINE Alu -31 282 1 316 313 82 7 chr17 81241444 81241591 -8262962 - MIR SINE MIR -57 205 48 234 121 0 136 chr17 81241604 81241668 -8262885 + MLT1A2 LTR MaLR 17 71 -303 1126 126 135 0 chr17 81241668 81241875 -8262678 - MSTA LTR MaLR -2 426 192 2058 95 22 0 chr17 81241878 81242151 -8262402 - AluSx SINE Alu -3 309 31 1284 103 0 6 chr17 81242336 81242511 -8262042 - AluY SINE Alu -13 298 125 2179 99 20 0 chr17 81242754 81243046 -8261507 - AluSc SINE Alu -11 298 1 809 129 32 0 chr17 81243893 81244017 -8260536 - AluSg/x SINE Alu -9 303 176 2023 98 0 0 chr17 81244122 81244376 -8260177 + AluSx SINE Alu 44 297 -15 2041 155 10 3 chr17 81245117 81245427 -8259126 - AluSx SINE Alu 0 312 1 1494 159 0 4 chr17 81245715 81245948 -8258605 - AluJb SINE Alu -80 232 1 628 201 35 59 chr17 81246085 81246254 -8258299 - HAL1 LINE L1 -828 1679 1515 1403 102 15 19 chr17 81246299 81246504 -8258049 - AluSq SINE Alu -30 283 80 1169 102 43 21 chr17 81246504 81246690 -8257863 + MER1B DNA MER1_type 150 339 0 279 227 67 87 chr17 81246755 81246905 -8257648 + HAL1 LINE L1 1239 1385 -1122 230 150 75 0 chr17 81246906 81246946 -8257607 + Alu SINE Alu 1 43 -256 1545 82 0 0 chr17 81246946 81247129 -8257424 - AluSx SINE Alu -129 183 1 878 241 96 48 chr17 81247149 81247440 -8257113 + L2 LINE L2 1519 1823 -1491 1601 106 18 4 chr17 81247527 81247754 -8256799 + MER30 DNA MER1_type 1 230 0 2183 111 3 43 chr17 81247831 81248155 -8256398 - AluSx SINE Alu -1 311 1 1581 158 47 12 chr17 81248256 81248510 -8256043 + AluJb SINE Alu 1 263 -49 1930 120 0 0 chr17 81248610 81248899 -8255654 + AluSx SINE Alu 38 312 0 1119 162 0 0 chr17 81248973 81249152 -8255401 + AluYa5 SINE Alu 118 296 -15 768 261 186 52 chr17 81249154 81249199 -8255354 + L2 LINE L2 1188 1226 -2088 2514 57 3 0 chr17 81249199 81249496 -8255057 + AluY SINE Alu 1 298 -13 768 261 186 52 chr17 81249496 81249757 -8254796 + L2 LINE L2 1226 1450 -1864 2106 139 0 10 chr17 81249757 81250060 -8254493 - AluJo SINE Alu -12 300 1 768 261 186 52 chr17 81250060 81250315 -8254238 + L2 LINE L2 1450 1826 -1488 2267 111 3 0 chr17 81250317 81250614 -8253939 - AluSx SINE Alu -14 298 1 356 186 93 7 chr17 81250690 81250829 -8253724 + L1MA9 LINE L1 6044 6291 -21 1158 152 0 0 chr17 81250861 81251019 -8253534 - FAM SINE Alu -17 158 1 1671 163 32 7 chr17 81251029 81251333 -8253220 - AluJo SINE Alu 0 311 1 22 0 0 0 chr17 81251336 81251358 -8253195 + AT_rich Low_complexity Low_complexity 1 22 0 1561 227 42 8 chr17 81251558 81251941 -8252612 + L2 LINE L2 1822 2217 -1097 561 271 30 12 chr17 81251949 81252115 -8252438 + L2 LINE L2 2548 2716 -598 1337 144 84 14 chr17 81252171 81252455 -8252098 + L1MC3 LINE L1 7470 7773 -12 259 259 0 0 chr17 81252521 81252575 -8251978 - HAL1 LINE L1 -1640 867 814 2205 132 0 0 chr17 81252575 81252885 -8251668 + AluSx SINE Alu 1 310 -2 745 65 0 0 chr17 81252885 81252977 -8251576 + AluSc SINE Alu 132 223 -86 608 114 0 69 chr17 81253520 81253651 -8250902 + AluSc SINE Alu 2 123 -186 687 241 9 0 chr17 81253752 81253868 -8250685 - AluSq/x SINE Alu -196 117 1 204 314 14 0 chr17 81253878 81253948 -8250605 + L2 LINE L2 2286 2356 -958 667 160 185 25 chr17 81253958 81254158 -8250395 + LTR48 LTR ERV1 1 232 -555 596 124 41 0 chr17 81254158 81254255 -8250298 + U6 snRNA snRNA 1 101 -6 2400 97 3 0 chr17 81254279 81254588 -8249965 + AluSp SINE Alu 4 313 0 2407 164 90 24 chr17 81254588 81255124 -8249429 + LTR48 LTR ERV1 217 787 0 483 302 70 23 chr17 81255329 81255501 -8249052 + MIR SINE MIR 1 180 -82 2129 112 26 16 chr17 81255703 81256008 -8248545 + AluSq SINE Alu 1 308 -5 2583 61 3 7 chr17 81256008 81256318 -8248235 + AluSp SINE Alu 4 312 -1 253 273 162 10 chr17 81256485 81256584 -8247969 + L2 LINE L2 3191 3304 -9 422 258 13 99 chr17 81256753 81256986 -8247567 + L2 LINE L2 2824 3036 -236 2217 100 7 0 chr17 81258543 81258834 -8245719 - AluSq SINE Alu -20 293 1 2209 102 37 0 chr17 81258878 81259173 -8245380 - AluSx SINE Alu -6 306 1 246 32 0 0 chr17 81259479 81259510 -8245043 + (TA)n Simple_repeat Simple_repeat 1 31 0 2346 112 3 0 chr17 81259560 81259872 -8244681 - AluSp SINE Alu 0 313 1 185 252 72 99 chr17 81259965 81260076 -8244477 + MER5B DNA MER1_type 1 108 -70 1684 151 16 20 chr17 81260379 81260684 -8243869 + MER47A DNA MER2_type 35 338 -28 620 282 26 15 chr17 81260854 81261049 -8243504 - MIR SINE MIR -35 227 31 242 242 89 73 chr17 81261067 81261191 -8243362 - L1ME4a LINE L1 0 6121 5996 2916 10 0 0 chr17 81261192 81261502 -8243051 - AluYb8 SINE Alu -8 310 1 847 92 0 0 chr17 81261591 81261700 -8242853 + AluSg/x SINE Alu 187 295 -15 1215 153 49 129 chr17 81261859 81262185 -8242368 + AluYb8 SINE Alu 1 300 -18 1858 140 3 42 chr17 81262699 81263006 -8241547 - AluJb SINE Alu -17 295 1 435 161 11 92 chr17 81263025 81263112 -8241441 - AluJ/FLAM SINE Alu -221 91 12 434 183 43 79 chr17 81263373 81263533 -8241020 - L1ME4a LINE L1 -301 5820 5672 726 228 106 49 chr17 81264943 81265189 -8239364 + MIR SINE MIR 3 262 0 1884 164 0 3 chr17 81265634 81265946 -8238607 - AluY SINE Alu 0 311 1 2532 70 0 3 chr17 81266690 81267002 -8237551 - AluY SINE Alu 0 311 1 464 217 44 56 chr17 81268153 81268364 -8236189 + MER106B DNA MER1_type 21 1052 -7 299 114 0 0 chr17 81268713 81268757 -8235796 - AluJ/FLAM SINE Alu -210 92 49 269 327 45 27 chr17 81269317 81269427 -8235126 + MIR SINE MIR 40 151 -111 1525 159 71 25 chr17 81269509 81269792 -8234761 + AluJo SINE Alu 1 296 -16 191 191 43 64 chr17 81269825 81269872 -8234681 - MIR SINE MIR -61 147 102 800 160 0 0 chr17 81270460 81270579 -8233974 - FLAM_C SINE Alu -24 119 1 268 307 77 34 chr17 81270822 81271006 -8233547 - L2 LINE L2 -307 2965 2777 1701 172 7 4 chr17 81271040 81271344 -8233209 - AluJo SINE Alu 0 315 11 216 0 0 0 chr17 81271392 81271416 -8233137 + (T)n Simple_repeat Simple_repeat 1 24 0 1465 141 0 10 chr17 81271433 81271639 -8232914 - AluSx SINE Alu -99 213 10 255 31 0 0 chr17 81271647 81271679 -8232874 + (TA)n Simple_repeat Simple_repeat 1 32 0 1294 116 4 93 chr17 81271680 81271905 -8232648 - AluSc SINE Alu -14 295 91 420 103 17 0 chr17 81272005 81272063 -8232490 - Alu SINE Alu -250 60 2 2073 92 4 0 chr17 81272078 81272338 -8232215 - AluSg SINE Alu -47 263 3 1032 183 154 5 chr17 81272408 81272616 -8231937 - MER8 DNA MER2_type 0 239 1 2623 50 0 0 chr17 81272620 81272917 -8231636 - AluY SINE Alu -14 297 1 1549 198 10 20 chr17 81274156 81274454 -8230099 - AluJb SINE Alu -17 295 1 200 360 7 37 chr17 81274664 81274800 -8229753 + L2 LINE L2 2572 2703 -611 257 317 72 111 chr17 81274810 81275029 -8229524 + L2 LINE L2 2836 3031 -241 2507 78 0 3 chr17 81275029 81275337 -8229216 + AluY SINE Alu 1 307 -4 257 317 72 111 chr17 81275337 81275559 -8228994 + L2 LINE L2 3031 3260 -12 943 180 72 24 chr17 81275570 81275737 -8228816 - FAM SINE Alu 0 175 1 478 254 31 8 chr17 81275769 81275899 -8228654 - L1ME LINE L1 -452 5669 5537 2161 104 0 50 chr17 81275994 81276312 -8228241 + AluSx SINE Alu 1 302 -10 1877 173 3 7 chr17 81276845 81277151 -8227402 + AluJb SINE Alu 1 305 -7 196 386 34 11 chr17 81277265 81277353 -8227200 + L2 LINE L2 3168 3257 -15 1631 166 3 21 chr17 81277476 81277766 -8226787 + AluJb SINE Alu 1 285 -27 308 218 115 0 chr17 81277938 81278016 -8226537 - LTR33 LTR ERVL -4 517 431 2205 192 31 20 chr17 81278096 81278636 -8225917 - LTR27 LTR ERV1 -140 496 3 395 269 54 15 chr17 81278810 81278940 -8225613 - LTR33 LTR ERVL -306 215 81 1675 113 88 4 chr17 81278958 81279196 -8225357 + AluSx SINE Alu 1 258 -54 2106 143 0 0 chr17 81279558 81279859 -8224694 - AluSx SINE Alu -11 301 1 2096 121 3 37 chr17 81279863 81280186 -8224367 - AluSx SINE Alu 0 312 1 252 167 0 0 chr17 81280227 81280275 -8224278 + CT-rich Low_complexity Low_complexity 1 48 0 2287 106 0 0 chr17 81280275 81280577 -8223976 - AluSq SINE Alu -11 302 1 1639 199 7 3 chr17 81280579 81280870 -8223683 - AluJb SINE Alu -20 292 1 298 294 84 8 chr17 81280935 81281054 -8223499 - L2 LINE L2 -20 3252 3125 255 198 279 9 chr17 81281057 81281168 -8223385 - MLT1B LTR MaLR -5 385 245 2257 104 7 13 chr17 81281175 81281482 -8223071 - AluY SINE Alu -6 305 1 261 268 24 0 chr17 81281482 81281564 -8222989 - MLT1B LTR MaLR -211 179 96 2286 110 7 3 chr17 81281577 81281887 -8222666 - AluY SINE Alu 0 311 1 692 148 16 31 chr17 81281889 81282017 -8222536 - MLT1B LTR MaLR -264 126 1 342 347 50 41 chr17 81282085 81282304 -8222249 - L2 LINE L2 -219 3053 2833 293 313 133 8 chr17 81282436 81282564 -8221989 - L2 LINE L2 -602 2712 2569 1636 162 64 14 chr17 81282578 81282875 -8221678 + AluJb SINE Alu 1 312 0 675 151 48 6 chr17 81282903 81283069 -8221484 + GA-rich Low_complexity Low_complexity 4 176 0 2244 130 0 0 chr17 81283097 81283404 -8221149 + AluSx SINE Alu 1 307 -5 727 163 17 17 chr17 81283410 81283588 -8220965 + GA-rich Low_complexity Low_complexity 1 178 0 361 83 0 0 chr17 81283589 81283637 -8220916 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 192 77 0 0 chr17 81284663 81284689 -8219864 + (TCCA)n Simple_repeat Simple_repeat 4 29 0 189 243 0 0 chr17 81284699 81284736 -8219817 - L2 LINE L2 -43 3270 3234 1639 161 38 3 chr17 81284842 81285133 -8219420 - AluJb SINE Alu -11 301 1 1425 165 0 50 chr17 81285710 81286007 -8218546 - AluJo SINE Alu -18 294 13 810 181 43 5 chr17 81286223 81286411 -8218142 + L1M4 LINE L1 2626 2820 -3326 1674 133 3 103 chr17 81286411 81286555 -8217998 + AluSx SINE Alu 1 158 -154 2469 56 0 0 chr17 81286555 81286860 -8217693 + AluY SINE Alu 1 305 -6 1674 133 3 103 chr17 81286860 81286876 -8217677 + AluSx SINE Alu 158 174 -138 2008 116 3 10 chr17 81286876 81287179 -8217374 + AluSx SINE Alu 5 305 -7 1674 133 3 103 chr17 81287179 81287348 -8217205 + AluSx SINE Alu 174 298 -14 835 185 23 17 chr17 81287349 81287522 -8217031 + LTR44 LTR ERV1 219 392 -127 1337 197 35 25 chr17 81287524 81287648 -8216905 + AluJb SINE Alu 1 122 -190 180 0 0 0 chr17 81287648 81287668 -8216885 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 1337 197 35 25 chr17 81287668 81287827 -8216726 + AluJb SINE Alu 122 287 -25 1291 147 60 93 chr17 81287847 81288147 -8216406 + AluJo SINE Alu 2 291 -11 1603 154 91 3 chr17 81288149 81288435 -8216118 + AluJo SINE Alu 1 311 -1 1889 144 17 0 chr17 81288435 81288726 -8215827 + AluSx SINE Alu 1 296 -16 769 136 14 54 chr17 81288749 81288896 -8215657 + LTR44 LTR ERV1 379 519 0 1813 111 32 14 chr17 81288914 81289215 -8215338 + AluSx SINE Alu 1 306 0 22 35 0 0 chr17 81290164 81290193 -8214360 + AT_rich Low_complexity Low_complexity 1 29 0 1664 159 22 4 chr17 81290228 81290504 -8214049 - AluJo SINE Alu -31 281 1 366 233 50 42 chr17 81291125 81291245 -8213308 - L1ME4a LINE L1 -3 6118 5998 2143 88 30 13 chr17 81292256 81292561 -8211992 + AluSg SINE Alu 1 310 0 2026 104 0 0 chr17 81292774 81293044 -8211509 + AluSc SINE Alu 22 291 -18 233 213 0 0 chr17 81293046 81293093 -8211460 + Alu SINE Alu 255 301 -1 846 153 194 10 chr17 81293189 81293385 -8211168 - MER46A DNA MER2_type 0 236 5 2193 68 0 4 chr17 81293514 81293819 -8210734 - AluY SINE Alu 0 304 1 594 289 32 67 chr17 81294314 81294373 -8210180 - MIR SINE MIR -2 260 200 2029 105 3 32 chr17 81294373 81294688 -8209865 + AluSg SINE Alu 1 306 -4 594 289 32 67 chr17 81294688 81294881 -8209672 - MIR SINE MIR -62 200 17 1986 97 0 4 chr17 81295197 81295466 -8209087 + AluSx SINE Alu 1 268 -44 198 91 0 0 chr17 81295477 81295510 -8209043 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 811 62 62 31 chr17 81295726 81295855 -8208698 + AluJ SINE Alu 1 133 -169 192 40 0 0 chr17 81295870 81295895 -8208658 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 890 205 0 22 chr17 81295899 81296065 -8208488 + AluJ SINE Alu 131 294 -18 2045 142 0 0 chr17 81296065 81296374 -8208179 + AluSq SINE Alu 1 309 -4 890 205 0 22 chr17 81296374 81296392 -8208161 + AluJ SINE Alu 294 311 -1 323 283 139 18 chr17 81296428 81296594 -8207959 + MIR SINE MIR 77 262 0 260 224 79 40 chr17 81296756 81296832 -8207721 + HsTC2 DNA Tc2 5 83 -1815 2173 105 3 0 chr17 81296932 81297228 -8207325 - AluSx SINE Alu -15 297 1 432 254 64 0 chr17 81297585 81297695 -8206858 + MIR SINE MIR 37 153 -109 1151 125 99 39 chr17 81297704 81297936 -8206617 + AluY SINE Alu 1 246 -65 944 101 0 7 chr17 81298040 81298178 -8206375 + AluJb SINE Alu 157 293 -19 2207 81 7 3 chr17 81298212 81298507 -8206046 + AluY SINE Alu 1 296 -15 2223 99 0 3 chr17 81298515 81298819 -8205734 + AluSg SINE Alu 1 303 -7 1719 157 0 20 chr17 81298828 81299127 -8205426 + AluJo SINE Alu 1 293 -19 2072 127 0 0 chr17 81299134 81299442 -8205111 + AluSx SINE Alu 1 308 -4 1529 176 27 0 chr17 81299622 81299917 -8204636 + AluJo SINE Alu 2 304 -8 24 0 0 0 chr17 81299946 81299970 -8204583 + AT_rich Low_complexity Low_complexity 1 24 0 1767 117 64 0 chr17 81300059 81300365 -8204188 + AluSg SINE Alu 1 323 0 420 274 181 51 chr17 81300366 81300581 -8203972 - MIR SINE MIR -18 244 2 588 113 0 41 chr17 81301491 81301588 -8202965 + AluJo SINE Alu 2 94 -218 308 257 257 15 chr17 81301589 81301725 -8202828 - MIR SINE MIR -92 170 2 1249 164 0 0 chr17 81301735 81301949 -8202604 + AluJo SINE Alu 97 310 -2 335 264 17 118 chr17 81301950 81302044 -8202509 + HAL1 LINE L1 2003 2072 -435 1881 138 26 10 chr17 81302044 81302349 -8202204 + AluSx SINE Alu 1 310 -2 335 264 17 118 chr17 81302349 81302432 -8202121 + HAL1 LINE L1 2072 2162 -345 257 213 188 0 chr17 81302454 81302534 -8202019 + HAL1 LINE L1 2246 2340 -167 347 252 177 7 chr17 81302573 81302720 -8201833 + HAL1 LINE L1 2334 2505 -2 2372 82 0 0 chr17 81306352 81306655 -8197898 - AluY SINE Alu -8 303 1 2530 42 3 0 chr17 81308308 81308616 -8195937 - AluY SINE Alu -1 310 2 339 301 10 19 chr17 81308624 81308727 -8195826 - MIR3 SINE MIR -39 169 68 637 191 0 22 chr17 81309442 81309578 -8194975 + FLAM_A SINE Alu 1 133 0 361 109 0 0 chr17 81309650 81309696 -8194857 - Alu SINE Alu -254 46 1 2046 97 3 23 chr17 81309780 81310088 -8194465 + AluSx SINE Alu 1 302 -10 2088 129 0 3 chr17 81310358 81310668 -8193885 - AluSx SINE Alu -3 309 1 1524 162 66 0 chr17 81310714 81310986 -8193567 - AluSx SINE Alu -13 299 10 800 102 7 48 chr17 81311007 81311154 -8193399 - AluYa5 SINE Alu -19 292 152 2234 73 3 16 chr17 81311540 81311855 -8192698 + AluY SINE Alu 1 311 0 2086 106 3 7 chr17 81312190 81312491 -8192062 + AluSq SINE Alu 1 300 -13 1643 181 0 10 chr17 81313820 81314119 -8190434 - AluJb SINE Alu -16 296 1 716 135 0 78 chr17 81314319 81314460 -8190093 + FLAM_C SINE Alu 6 135 -8 224 232 36 0 chr17 81315256 81315312 -8189241 + CT-rich Low_complexity Low_complexity 5 62 0 2070 89 12 61 chr17 81315407 81315734 -8188819 - AluSx SINE Alu -1 311 1 2153 100 0 22 chr17 81316955 81317274 -8187279 + AluSq SINE Alu 1 312 -1 293 284 190 0 chr17 81317274 81317390 -8187163 - L1ME3A LINE L1 -35 6135 5998 2051 66 0 0 chr17 81317429 81317688 -8186865 + AluY SINE Alu 39 297 -14 1115 59 0 0 chr17 81318519 81318654 -8185899 + AluSq/x SINE Alu 1 135 -178 2285 101 8 0 chr17 81318654 81319335 -8185218 + AluY SINE Alu 1 297 -14 192 125 0 0 chr17 81319468 81319500 -8185053 + (T)n Simple_repeat Simple_repeat 1 32 0 1774 143 7 27 chr17 81319852 81320145 -8184408 + AluSx SINE Alu 7 293 -19 266 172 95 16 chr17 81320588 81320672 -8183881 + FAM SINE Alu 1 174 -1 827 166 8 2 chr17 81321781 81322028 -8182525 + AluJb SINE Alu 2 298 -14 341 81 32 16 chr17 81322028 81322090 -8182463 + Tigger7 DNA MER2_type 2244 2306 -181 738 200 0 30 chr17 81322090 81322225 -8182328 - FLAM_C SINE Alu -11 132 2 391 115 90 0 chr17 81322226 81322304 -8182249 + Tigger7 DNA MER2_type 2297 2381 -110 708 125 0 0 chr17 81322309 81322405 -8182148 + AluJ/FLAM SINE Alu 6 101 -211 2477 51 0 13 chr17 81322413 81322728 -8181825 + AluY SINE Alu 1 311 0 698 144 17 25 chr17 81322736 81322854 -8181699 + Tigger7 DNA MER2_type 2371 2487 0 200 325 115 64 chr17 81322929 81323086 -8181467 + MIR3 SINE MIR 22 186 -22 2250 91 0 0 chr17 81323508 81323805 -8180748 + AluSx SINE Alu 1 297 -15 276 193 0 91 chr17 81324425 81324513 -8180040 - MER46C DNA MER2_type 0 338 259 251 189 113 0 chr17 81324570 81324623 -8179930 + L2 LINE L2 3242 3300 -13 502 220 199 48 chr17 81325081 81325267 -8179286 - MER58C DNA MER1_type 0 215 2 246 32 0 0 chr17 81325845 81325876 -8178677 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1253 292 0 108 chr17 81326194 81326526 -8178027 - AluY SINE Alu -4 297 2 684 114 61 0 chr17 81326529 81326643 -8177910 + MER41A LTR ERV1 434 554 0 1867 122 17 0 chr17 81326660 81326947 -8177606 - AluSp SINE Alu -16 297 6 328 327 106 0 chr17 81326953 81327066 -8177487 - MIR SINE MIR -56 152 28 225 315 63 54 chr17 81327251 81327362 -8177191 - MIR SINE MIR -48 214 103 2485 54 0 13 chr17 81327547 81327862 -8176691 + AluY SINE Alu 1 311 0 2283 81 7 0 chr17 81327872 81328181 -8176372 + AluY SINE Alu 1 311 0 2093 78 0 33 chr17 81328198 81328504 -8176049 + AluSc SINE Alu 1 296 -13 2019 125 30 0 chr17 81328515 81328819 -8175734 + AluSq SINE Alu 1 313 0 26 0 0 0 chr17 81330875 81330901 -8173652 + GC_rich Low_complexity Low_complexity 1 26 0 2302 107 3 0 chr17 81332489 81332797 -8171756 - AluSp SINE Alu -4 309 1 2059 115 13 29 chr17 81332797 81333109 -8171444 - AluSc SINE Alu -2 307 1 268 31 0 0 chr17 81333115 81333147 -8171406 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1023 144 0 20 chr17 81333147 81333300 -8171253 - AluSg/x SINE Alu -1 313 133 2482 78 3 0 chr17 81333333 81333641 -8170912 + AluY SINE Alu 1 309 -2 225 198 81 70 chr17 81333652 81333738 -8170815 + L1 LINE L1 3420 3506 -2640 1128 88 0 0 chr17 81333797 81333933 -8170620 + AluSq/x SINE Alu 1 136 -176 2494 78 7 0 chr17 81333933 81334240 -8170313 + AluSq SINE Alu 1 309 -4 216 67 0 0 chr17 81334600 81334630 -8169923 + (TG)n Simple_repeat Simple_repeat 2 31 0 683 153 0 9 chr17 81334636 81334747 -8169806 - FLAM_A SINE Alu -24 118 9 2532 58 0 0 chr17 81334818 81335109 -8169444 + AluY SINE Alu 1 291 -20 1765 161 3 26 chr17 81335109 81335414 -8169139 - AluJb SINE Alu -12 300 3 1096 179 5 31 chr17 81336018 81336241 -8168312 + AluJb SINE Alu 86 302 -10 2174 127 0 26 chr17 81336460 81336768 -8167785 - AluSx SINE Alu -12 300 1 1916 165 7 3 chr17 81338032 81338335 -8166218 + AluJb SINE Alu 1 304 -8 1739 170 3 10 chr17 81338397 81338691 -8165862 - AluJb SINE Alu -20 292 1 508 81 139 0 chr17 81338725 81338811 -8165742 - HY1 scRNA scRNA -2 110 13 1293 101 0 0 chr17 81339299 81339467 -8165086 - AluSg/x SINE Alu -8 302 135 2352 153 18 122 chr17 81339566 81339955 -8164598 - MER21A LTR ERV1 0 931 624 1536 177 59 24 chr17 81339955 81340243 -8164310 - AluJo SINE Alu -12 300 3 2352 153 18 122 chr17 81340243 81340454 -8164099 - MER21A LTR ERV1 -307 624 393 551 216 17 17 chr17 81340455 81340571 -8163982 - AluJb SINE Alu -23 289 174 2134 128 0 7 chr17 81340635 81340931 -8163622 - AluSx SINE Alu -18 294 1 1982 146 4 0 chr17 81340932 81341207 -8163346 - AluSq SINE Alu -37 276 1 1525 133 111 87 chr17 81341207 81341576 -8162977 - MER21A LTR ERV1 -529 402 25 691 145 25 13 chr17 81341764 81341923 -8162630 + C-rich Low_complexity Low_complexity 1 161 0 2080 100 7 4 chr17 81341927 81342207 -8162346 - AluSq SINE Alu -32 281 1 2031 141 17 0 chr17 81342403 81342693 -8161860 - AluSx SINE Alu -17 295 1 415 145 0 26 chr17 81342694 81342770 -8161783 - AluSq/x SINE Alu -169 144 71 2361 98 16 0 chr17 81342809 81343114 -8161439 - AluSx SINE Alu -2 310 1 1509 179 38 21 chr17 81343203 81343364 -8161189 - AluJb SINE Alu -16 296 126 2142 142 0 3 chr17 81343364 81343675 -8160878 - AluSg SINE Alu 0 310 1 1509 179 38 21 chr17 81343675 81343804 -8160749 - AluJb SINE Alu -186 126 1 473 125 49 139 chr17 81344190 81344269 -8160284 - MER5C DNA MER1_type -146 178 116 2169 87 43 0 chr17 81344269 81344546 -8160007 + AluSc SINE Alu 1 289 -20 473 125 49 139 chr17 81344546 81344610 -8159943 - MER5C DNA MER1_type -208 116 48 2159 106 10 0 chr17 81344654 81344946 -8159607 - AluSx SINE Alu -17 295 1 23 0 0 0 chr17 81345645 81345668 -8158885 + AT_rich Low_complexity Low_complexity 1 23 0 281 254 0 0 chr17 81345711 81345774 -8158779 + MER5C DNA MER1_type 48 110 -214 2005 138 7 3 chr17 81345777 81346074 -8158479 + AluSx SINE Alu 1 298 -14 2095 132 0 19 chr17 81346222 81346533 -8158020 + AluSq SINE Alu 1 305 -8 1751 108 0 5 chr17 81346536 81346758 -8157795 + AluSx SINE Alu 1 221 -91 255 61 0 0 chr17 81346772 81346805 -8157748 + (A)n Simple_repeat Simple_repeat 1 33 0 1803 136 3 45 chr17 81346826 81347112 -8157441 + AluJo SINE Alu 11 284 -28 2128 105 7 0 chr17 81347695 81347971 -8156582 + AluSg SINE Alu 1 278 -32 192 40 0 0 chr17 81347973 81347998 -8156555 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 593 144 58 0 chr17 81349361 81349465 -8155088 + FLAM_A SINE Alu 18 127 -15 1227 110 115 0 chr17 81349589 81349771 -8154782 + AluJb SINE Alu 87 289 -23 805 187 28 44 chr17 81349784 81349809 -8154744 - MER21A LTR ERV1 -86 845 821 189 0 0 0 chr17 81349809 81349830 -8154723 + (CAAG)n Simple_repeat Simple_repeat 3 23 0 805 187 28 44 chr17 81349830 81349863 -8154690 - MER21A LTR ERV1 -110 821 789 2184 118 7 3 chr17 81349863 81350159 -8154394 - AluSx SINE Alu -15 297 1 805 187 28 44 chr17 81350159 81350281 -8154272 - MER21A LTR ERV1 -142 789 667 2255 109 0 3 chr17 81350339 81350633 -8153920 - AluSg SINE Alu -17 293 1 2201 76 7 35 chr17 81350674 81350982 -8153571 - AluY SINE Alu 0 300 1 1569 159 18 7 chr17 81351084 81351360 -8153193 - AluJo SINE Alu -33 279 1 2275 94 27 0 chr17 81351455 81351754 -8152799 - AluSp SINE Alu -6 307 1 2412 89 0 10 chr17 81352046 81352359 -8152194 + AluSx SINE Alu 1 310 -2 236 225 138 0 chr17 81352381 81352461 -8152092 - Charlie2 DNA MER1_type -2413 369 279 2318 110 7 0 chr17 81356108 81356416 -8148137 + AluSx SINE Alu 3 312 0 425 209 19 0 chr17 81356469 81356574 -8147979 + L1MA10 LINE L1 6224 6330 -4 1879 160 7 3 chr17 81356584 81356878 -8147675 + AluJb SINE Alu 1 295 -17 2011 87 40 7 chr17 81356879 81357154 -8147399 + AluSx SINE Alu 1 284 -28 481 239 0 54 chr17 81357260 81357390 -8147163 - FLAM_A SINE Alu -10 123 1 2421 77 7 3 chr17 81357400 81357700 -8146853 - AluSx SINE Alu -11 301 1 1184 140 6 0 chr17 81357729 81357908 -8146645 + AluSp SINE Alu 133 312 -1 2234 110 0 20 chr17 81358623 81358923 -8145630 - AluSx SINE Alu -18 294 1 203 313 50 12 chr17 81359634 81359714 -8144839 - MIR SINE MIR -89 173 91 263 238 37 154 chr17 81360474 81360557 -8143996 + L1ME4a LINE L1 5727 5818 -303 2075 96 36 7 chr17 81360557 81360838 -8143715 - AluSg SINE Alu -20 290 2 263 238 37 154 chr17 81360838 81360869 -8143684 + L1ME4a LINE L1 5818 5851 -270 1946 95 4 4 chr17 81360869 81361122 -8143431 + AluY SINE Alu 44 296 -15 2210 118 0 35 chr17 81361131 81361446 -8143107 + AluSg SINE Alu 1 304 -6 263 238 37 154 chr17 81361446 81361534 -8143019 + L1ME4a LINE L1 5859 5915 -206 448 271 214 4 chr17 81361540 81361769 -8142784 + L2 LINE L2 3019 3295 -18 2200 103 10 3 chr17 81361817 81362118 -8142435 + AluSq SINE Alu 1 303 -10 2113 101 30 14 chr17 81362130 81362427 -8142126 - AluSg1 SINE Alu -7 302 1 1819 250 166 27 chr17 81362476 81362766 -8141787 + L1ME1 LINE L1 5169 5417 -749 2109 134 0 3 chr17 81362766 81363065 -8141488 + AluSx SINE Alu 2 299 -13 1819 250 166 27 chr17 81363065 81363643 -8140910 + L1ME1 LINE L1 5417 6158 -8 2582 63 0 0 chr17 81363644 81363946 -8140607 - AluY SINE Alu -9 302 1 2273 102 10 0 chr17 81364277 81364571 -8139982 + AluSx SINE Alu 1 297 -15 2481 54 0 41 chr17 81364718 81365032 -8139521 + AluY SINE Alu 1 301 -10 588 126 0 0 chr17 81365376 81365463 -8139090 + AluJ/FLAM SINE Alu 2 88 -224 3693 154 63 32 chr17 81366121 81366336 -8138217 + LTR39 LTR ERV1 2 209 -574 2355 86 7 13 chr17 81366336 81366640 -8137913 - AluSx SINE Alu -10 302 1 3693 154 63 32 chr17 81366640 81367102 -8137451 + LTR39 LTR ERV1 209 708 -75 2381 106 0 0 chr17 81367102 81367414 -8137139 + AluSx SINE Alu 1 312 0 3693 154 63 32 chr17 81367414 81367493 -8137060 + LTR39 LTR ERV1 708 783 0 204 294 288 0 chr17 81367599 81367752 -8136801 + MIR3 SINE MIR 9 205 -3 231 296 7 70 chr17 81367798 81367841 -8136712 + MIR SINE MIR 34 78 -184 2379 79 10 0 chr17 81367841 81368133 -8136420 - AluSp SINE Alu -18 295 1 231 296 7 70 chr17 81368133 81368231 -8136322 + MIR SINE MIR 78 166 -96 242 276 92 0 chr17 81368612 81368688 -8135865 - MIR SINE MIR -71 191 109 735 172 0 22 chr17 81368769 81368903 -8135650 - FLAM_C SINE Alu -11 132 2 2228 110 20 0 chr17 81368917 81369217 -8135336 - AluSx SINE Alu -6 306 1 285 150 50 0 chr17 81370421 81370481 -8134072 + MER115 DNA AcHobo 15 77 -616 566 284 15 0 chr17 81370550 81370684 -8133869 + MER115 DNA AcHobo 207 342 -351 2650 42 0 3 chr17 81370825 81371131 -8133422 + AluY SINE Alu 2 306 -5 2246 92 7 0 chr17 81371155 81371486 -8133067 + AluSx SINE Alu 1 333 0 1672 134 0 31 chr17 81371673 81371927 -8132626 + AluJo SINE Alu 64 309 -3 531 129 43 11 chr17 81371960 81372053 -8132500 + L1MC3 LINE L1 7158 7253 -532 585 131 107 66 chr17 81372062 81372184 -8132369 - FAM SINE Alu -45 140 14 391 309 119 30 chr17 81372235 81372647 -8131906 + L2 LINE L2 2777 3311 -2 1756 146 49 28 chr17 81372743 81373030 -8131523 - AluJb SINE Alu -16 296 4 2284 74 10 24 chr17 81373041 81373338 -8131215 - AluSq SINE Alu -20 293 1 955 169 0 7 chr17 81373363 81373517 -8131036 - AluJb SINE Alu -23 289 137 2102 112 34 0 chr17 81373517 81373813 -8130740 - AluSq SINE Alu -7 306 1 1655 120 83 53 chr17 81374317 81374617 -8129936 - AluSg SINE Alu -1 309 1 2214 97 0 0 chr17 81374628 81374934 -8129619 - AluSc SINE Alu 0 306 1 507 146 0 0 chr17 81374977 81375066 -8129487 + AluY SINE Alu 215 303 -8 1263 175 5 5 chr17 81375218 81375424 -8129129 - AluJo SINE Alu -104 208 3 23 33 0 0 chr17 81375540 81375570 -8128983 + AT_rich Low_complexity Low_complexity 1 30 0 2406 70 0 0 chr17 81376061 81376379 -8128174 - AluY SINE Alu 0 318 1 2379 68 3 10 chr17 81376386 81376678 -8127875 - AluSp SINE Alu -23 290 1 2181 134 0 3 chr17 81376682 81376995 -8127558 - AluSx SINE Alu 0 312 1 2296 97 0 0 chr17 81377367 81377656 -8126897 + AluSg SINE Alu 1 289 -21 2360 55 13 42 chr17 81377657 81377967 -8126586 + AluY SINE Alu 1 301 -10 382 286 68 0 chr17 81379259 81379406 -8125147 + Charlie8 DNA MER1_type 107 263 -2154 2071 132 7 3 chr17 81379932 81380242 -8124311 - AluSx SINE Alu -1 311 1 1548 137 9 0 chr17 81380301 81380528 -8124025 + AluSg/x SINE Alu 81 309 -1 497 73 15 0 chr17 81380528 81380596 -8123957 + AluS SINE Alu 3 71 -242 431 55 192 0 chr17 81380697 81380770 -8123783 + Alu SINE Alu 221 307 -3 2103 107 13 20 chr17 81381311 81381610 -8122943 - AluSx SINE Alu -15 297 1 488 225 185 11 chr17 81381793 81381971 -8122582 - MER3 DNA MER1_type 0 209 1 881 175 0 0 chr17 81383398 81383541 -8121012 - FLAM_C SINE Alu 0 143 1 1985 112 20 24 chr17 81384701 81384996 -8119557 - AluSx SINE Alu -18 294 1 720 258 33 61 chr17 81385427 81385664 -8118889 + MIR SINE MIR 7 238 -24 1910 147 12 44 chr17 81385725 81386045 -8118508 + AluJb SINE Alu 3 312 0 1965 124 3 39 chr17 81386047 81386353 -8118200 + AluSg SINE Alu 2 296 -14 1574 137 0 0 chr17 81386354 81386573 -8117980 + AluSq SINE Alu 1 219 -94 802 146 0 0 chr17 81386573 81386696 -8117857 + AluSg/x SINE Alu 186 308 -2 254 156 0 0 chr17 81387092 81387137 -8117416 + Alu SINE Alu 1 45 -258 2442 88 0 0 chr17 81387431 81387736 -8116817 - AluY SINE Alu -6 305 1 2430 84 7 0 chr17 81388184 81388482 -8116071 - AluSp SINE Alu -13 300 1 2260 140 0 0 chr17 81389097 81389404 -8115149 + AluSx SINE Alu 1 307 -5 2347 79 17 0 chr17 81390834 81391126 -8113427 + AluSg SINE Alu 1 297 -13 24 53 0 0 chr17 81391241 81391279 -8113274 + AT_rich Low_complexity Low_complexity 1 38 0 183 281 0 18 chr17 81392663 81392720 -8111833 + MER5A DNA MER1_type 38 93 -96 1654 171 31 17 chr17 81393031 81393323 -8111230 + AluJo SINE Alu 3 298 -14 2353 110 0 0 chr17 81393325 81393633 -8110920 + AluSg SINE Alu 1 308 -2 1411 150 178 0 chr17 81393642 81393895 -8110658 + AluJb SINE Alu 1 298 -14 1085 150 23 192 chr17 81393960 81394314 -8110239 - AluJo SINE Alu -8 294 1 1066 174 13 51 chr17 81394961 81395013 -8109540 - MER82 DNA MER2_type -378 275 223 2608 50 7 0 chr17 81395013 81395312 -8109241 - AluY SINE Alu -10 301 1 1066 174 13 51 chr17 81395312 81395495 -8109058 - MER82 DNA MER2_type -430 223 49 468 42 0 0 chr17 81395499 81395570 -8108983 + AluSp/q SINE Alu 242 312 -1 973 243 224 33 chr17 81395585 81395721 -8108832 + L2 LINE L2 2214 2323 -991 1685 174 21 11 chr17 81395721 81396030 -8108523 + AluJb SINE Alu 1 312 0 973 243 224 33 chr17 81396030 81396379 -8108174 + L2 LINE L2 2323 2792 -522 496 278 89 12 chr17 81396363 81396532 -8108021 - MIR SINE MIR -7 255 74 * 553 171 0 0 chr17 81396532 81396614 -8107939 + AluJ/FLAM SINE Alu 3 84 -228 1243 129 0 0 chr17 81396627 81396798 -8107755 + AluSq SINE Alu 1 171 -142 470 148 0 0 chr17 81396798 81396879 -8107674 + AluS SINE Alu 232 312 0 2308 76 13 10 chr17 81396886 81397187 -8107366 + AluY SINE Alu 1 302 -9 1595 154 23 0 chr17 81397202 81397289 -8107264 + AluSx SINE Alu 42 126 -186 216 0 0 0 chr17 81397289 81397313 -8107240 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1595 154 23 0 chr17 81397313 81397484 -8107069 + AluSx SINE Alu 126 306 -6 754 236 38 0 chr17 81397486 81397643 -8106910 + AluJb SINE Alu 134 296 -16 2276 115 0 0 chr17 81397643 81397938 -8106615 + AluSg SINE Alu 1 295 -15 418 213 0 0 chr17 81397945 81398025 -8106528 - MIR SINE MIR -177 85 6 589 272 183 28 chr17 81398035 81398492 -8106061 + L2 LINE L2 2771 3305 -8 1771 193 10 0 chr17 81398492 81398788 -8105765 + AluJo SINE Alu 1 299 -13 195 42 0 0 chr17 81398865 81398889 -8105664 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 719 156 38 129 chr17 81399150 81399303 -8105250 + AluY SINE Alu 132 267 -44 761 120 14 78 chr17 81399303 81399445 -8105108 - AluJo/FLAM SINE Alu -169 133 1 719 156 38 129 chr17 81399445 81399477 -8105076 + AluY SINE Alu 267 300 -11 2040 113 11 7 chr17 81400257 81400561 -8103992 + AluSx SINE Alu 1 305 0 1730 135 3 118 chr17 81400564 81400706 -8103847 + AluJb SINE Alu 1 83 -219 1915 140 11 0 chr17 81400706 81400985 -8103568 + AluJo SINE Alu 1 282 -30 1730 135 3 118 chr17 81400985 81401182 -8103371 + AluJb SINE Alu 83 301 -1 2406 104 3 0 chr17 81401501 81401810 -8102743 + AluSp SINE Alu 1 310 -3 1816 171 17 10 chr17 81402556 81402854 -8101699 + AluJo SINE Alu 1 300 -12 2203 106 7 3 chr17 81402874 81403176 -8101377 - AluSq SINE Alu -10 303 1 2346 109 7 0 chr17 81403185 81403489 -8101064 - AluSx SINE Alu -6 306 1 321 261 42 8 chr17 81403521 81403640 -8100913 - MER113 DNA MER1_type? -395 126 4 2308 43 96 0 chr17 81403922 81404203 -8100350 + AluY SINE Alu 1 308 -3 888 150 0 0 chr17 81404213 81404340 -8100213 + FLAM_C SINE Alu 2 128 -5 1556 112 0 10 chr17 81404479 81404685 -8099868 + AluSx SINE Alu 7 210 -102 375 91 0 0 chr17 81404685 81404740 -8099813 + AluSx SINE Alu 245 299 -2 1060 189 35 154 chr17 81405246 81405589 -8098964 + AluSq SINE Alu 2 303 0 1196 143 0 0 chr17 81405634 81405809 -8098744 + AluSg/x SINE Alu 136 310 0 255 125 0 0 chr17 81405956 81405996 -8098557 + (CA)n Simple_repeat Simple_repeat 1 40 0 634 239 49 19 chr17 81406095 81406300 -8098253 + L1MC4a LINE L1 6778 6988 -820 1892 95 110 7 chr17 81406370 81406643 -8097910 + AluSg SINE Alu 1 301 -9 2324 110 0 0 chr17 81406764 81407063 -8097490 + AluSx SINE Alu 1 299 -13 2435 86 0 0 chr17 81407066 81407367 -8097186 + AluY SINE Alu 1 301 -10 286 260 274 20 chr17 81407518 81407664 -8096889 - MER5A DNA MER1_type 0 189 7 2289 108 10 0 chr17 81408325 81408630 -8095923 + AluSg SINE Alu 1 308 -2 1317 158 20 31 chr17 81409079 81409333 -8095220 + AluJo SINE Alu 57 307 -5 1896 154 13 29 chr17 81409601 81409913 -8094640 - AluSx SINE Alu -5 307 1 314 233 56 0 chr17 81409924 81410014 -8094539 + MER6B DNA MER2_type 47 141 -69 317 76 136 30 chr17 81410014 81410080 -8094473 + AluS SINE Alu 1 73 -229 1516 96 5 19 chr17 81410080 81410289 -8094264 - AluSq SINE Alu -35 278 73 2244 107 0 0 chr17 81410289 81410579 -8093974 + AluSg SINE Alu 1 290 -20 2262 109 0 3 chr17 81410582 81410884 -8093669 + AluSp SINE Alu 1 301 -12 783 205 108 113 chr17 81410906 81411060 -8093493 + LTR34 LTR ERV1 136 289 -410 2428 43 0 33 chr17 81411060 81411359 -8093194 + AluY SINE Alu 1 289 -22 783 205 108 113 chr17 81411359 81411692 -8092861 + LTR34 LTR ERV1 289 695 -4 2194 117 0 3 chr17 81412917 81413217 -8091336 + AluSx SINE Alu 1 299 -13 2200 105 0 0 chr17 81413219 81413514 -8091039 + AluSx SINE Alu 1 295 -17 2342 56 0 66 chr17 81413900 81414220 -8090333 + AluY SINE Alu 1 299 -12 2363 93 6 3 chr17 81414488 81414799 -8089754 - AluSx SINE Alu 0 312 1 610 167 62 176 chr17 81414895 81414953 -8089600 + AluJo SINE Alu 86 149 -163 2243 100 13 7 chr17 81414953 81415263 -8089290 + AluSx SINE Alu 1 312 0 610 167 62 176 chr17 81415263 81415431 -8089122 + AluJo SINE Alu 149 286 -26 2382 88 13 0 chr17 81415441 81415747 -8088806 + AluSg SINE Alu 1 310 0 2116 118 0 3 chr17 81415751 81416065 -8088488 + AluSp SINE Alu 1 313 0 520 211 70 0 chr17 81416094 81416208 -8088345 - MER20 DNA MER1_type -97 122 1 2309 111 0 0 chr17 81416483 81416780 -8087773 + AluSx SINE Alu 1 297 -15 2184 138 0 0 chr17 81416781 81417092 -8087461 + AluSx SINE Alu 2 312 0 690 202 0 0 chr17 81417102 81417221 -8087332 - FLAM_C SINE Alu -23 120 2 518 161 0 0 chr17 81417224 81417305 -8087248 - FRAM SINE Alu -26 150 70 2083 114 3 17 chr17 81417608 81417907 -8086646 + AluSx SINE Alu 1 295 -17 229 330 94 0 chr17 81417931 81418037 -8086516 - L2 LINE L2 -2 3270 3155 837 229 62 5 chr17 81418197 81418389 -8086164 + AluJb SINE Alu 97 299 -13 210 171 0 0 chr17 81418410 81418451 -8086102 + GA-rich Low_complexity Low_complexity 3 43 0 1691 132 6 126 chr17 81418468 81418622 -8085931 + AluJo SINE Alu 1 172 -130 2654 30 0 10 chr17 81418622 81418922 -8085631 + AluY SINE Alu 1 297 -14 2389 66 6 41 chr17 81418923 81419241 -8085312 + AluY SINE Alu 1 307 -4 1691 132 6 126 chr17 81419241 81419426 -8085127 + AluJo SINE Alu 171 301 -1 1970 121 81 0 chr17 81419446 81419719 -8084834 + AluSg SINE Alu 1 295 -15 2269 95 0 3 chr17 81419721 81420028 -8084525 + AluSq SINE Alu 1 306 0 630 171 0 0 chr17 81420036 81420141 -8084412 - Tigger4(Zombi) DNA MER2_type -2626 105 1 1966 135 24 14 chr17 81420224 81420520 -8084033 - AluSx SINE Alu 0 312 14 2061 155 0 3 chr17 81420600 81420897 -8083656 - AluSx SINE Alu -16 296 1 967 173 0 0 chr17 81421101 81421285 -8083268 - AluSg/x SINE Alu 0 316 133 2268 122 0 0 chr17 81421286 81421589 -8082964 - AluSg SINE Alu -7 303 1 1360 19 0 0 chr17 81421627 81421783 -8082770 - L1PA4 LINE L1 -3 6152 5997 369 0 0 0 chr17 81421846 81421887 -8082666 + (TG)n Simple_repeat Simple_repeat 2 42 0 414 153 0 0 chr17 81421889 81421948 -8082605 - AluS SINE Alu -32 279 221 794 167 0 23 chr17 81421952 81422084 -8082469 - FLAM_C SINE Alu 0 133 5 2203 140 0 0 chr17 81422112 81422419 -8082134 - AluSx SINE Alu -5 307 1 2460 76 3 3 chr17 81422426 81422728 -8081825 - AluSp SINE Alu -11 302 1 303 296 74 9 chr17 81422800 81422908 -8081645 - L2 LINE L2 -20 3293 3179 297 0 0 0 chr17 81422911 81422944 -8081609 + (CA)n Simple_repeat Simple_repeat 2 34 0 391 231 75 75 chr17 81423050 81423153 -8081400 + MIR SINE MIR 11 116 -146 2984 3 0 0 chr17 81423153 81423466 -8081087 - AluYb8 SINE Alu -5 313 1 391 231 75 75 chr17 81423466 81423509 -8081044 + MIR SINE MIR 115 157 -105 2057 105 20 14 chr17 81423517 81423811 -8080742 + AluSg SINE Alu 1 296 -14 2397 97 3 7 chr17 81423818 81424128 -8080425 + AluSp SINE Alu 1 309 -4 526 181 0 0 chr17 81424187 81424270 -8080283 - AluJ/FLAM SINE Alu -219 93 11 699 88 0 0 chr17 81424321 81424412 -8080141 + AluSp/q SINE Alu 210 300 -13 592 161 0 0 chr17 81424462 81424549 -8080004 - AluJ/FLAM SINE Alu -215 97 11 26 0 0 0 chr17 81424569 81424595 -8079958 + AT_rich Low_complexity Low_complexity 1 26 0 2004 136 3 17 chr17 81424595 81424730 -8079823 + AluSx SINE Alu 1 136 -166 2133 116 14 3 chr17 81424730 81425022 -8079531 + AluSq SINE Alu 1 295 -18 2470 66 0 13 chr17 81425022 81425323 -8079230 + AluY SINE Alu 1 297 -14 1818 120 57 47 chr17 81425323 81425467 -8079086 + AluSg SINE Alu 1 142 -168 2298 86 0 35 chr17 81425467 81425781 -8078772 + AluY SINE Alu 1 303 -8 1818 120 57 47 chr17 81425781 81425936 -8078617 + AluSg SINE Alu 142 303 -7 2004 136 3 17 chr17 81425936 81426093 -8078460 + AluSx SINE Alu 133 291 -11 740 152 0 23 chr17 81426106 81426238 -8078315 - FLAM_C SINE Alu 0 143 15 1475 204 29 26 chr17 81426265 81426574 -8077979 - AluJb SINE Alu 0 312 3 2420 75 3 0 chr17 81426657 81426951 -8077602 + AluSc SINE Alu 6 300 -9 2281 114 0 0 chr17 81427114 81427412 -8077141 - AluSq SINE Alu -15 298 1 2255 120 0 0 chr17 81427413 81427714 -8076839 - AluSq SINE Alu -12 301 1 2180 89 3 3 chr17 81427727 81428048 -8076505 - AluSg SINE Alu 0 321 1 2351 97 0 10 chr17 81428123 81428431 -8076122 - AluSq SINE Alu -8 305 1 242 259 191 37 chr17 81428479 81428641 -8075912 + MIR SINE MIR 70 256 -6 249 255 133 20 chr17 81428659 81428757 -8075796 + L2 LINE L2 3172 3280 -33 2153 109 3 3 chr17 81428766 81429073 -8075480 - AluSx SINE Alu 0 307 1 907 232 0 0 chr17 81429083 81429247 -8075306 - FRAM SINE Alu -2 164 1 225 0 0 0 chr17 81429258 81429283 -8075270 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1257 135 5 5 chr17 81429499 81429677 -8074876 - AluSg/x SINE Alu -1 309 129 2125 121 0 10 chr17 81429677 81430004 -8074549 - AluSx SINE Alu 0 312 1 1257 135 5 5 chr17 81430004 81430017 -8074536 - AluSg/x SINE Alu -180 130 118 2014 136 33 0 chr17 81430048 81430350 -8074203 - AluSx SINE Alu 0 312 1 1667 190 3 13 chr17 81430380 81430680 -8073873 + AluJo SINE Alu 1 297 -15 476 111 0 74 chr17 81430692 81430773 -8073780 + AluJ/FLAM SINE Alu 2 76 -236 1066 102 127 0 chr17 81430779 81430936 -8073617 - AluSq SINE Alu 0 313 137 1114 162 15 15 chr17 81430985 81431182 -8073371 + AluJo SINE Alu 104 300 -12 278 196 0 0 chr17 81431211 81431257 -8073296 + MER5A DNA MER1_type 118 163 -26 2262 84 7 7 chr17 81431291 81431576 -8072977 - AluSx SINE Alu -17 295 11 416 43 0 0 chr17 81431579 81431626 -8072927 - AluSq/x SINE Alu -202 110 64 1447 155 0 91 chr17 81631652 81631961 -7872592 - AluJo SINE Alu -31 281 1 314 259 148 12 chr17 81631973 81632004 -7872549 + HAL1 LINE L1 52 77 -2430 2320 82 0 16 chr17 81632004 81632319 -7872234 + AluY SINE Alu 1 310 -1 314 259 148 12 chr17 81632319 81632368 -7872185 + HAL1 LINE L1 77 143 -2364 416 359 97 20 chr17 81632373 81632669 -7871884 + L1 LINE L1 4212 4478 -1668 655 197 34 7 chr17 81632669 81632816 -7871737 + AluSp SINE Alu 1 151 -162 321 241 24 0 chr17 81632920 81633003 -7871550 + MER20 DNA MER1_type 135 219 0 873 231 28 32 chr17 81633003 81633250 -7871303 + L1ME1 LINE L1 5916 6161 -5 241 254 0 0 chr17 81634740 81634803 -7869750 - AluJ/FLAM SINE Alu -239 63 1 714 230 54 0 chr17 81634814 81634962 -7869591 - FRAM SINE Alu -21 155 1 276 263 116 0 chr17 81634966 81635061 -7869492 + MIR SINE MIR 97 202 -60 1922 135 0 31 chr17 81635158 81635301 -7869252 + AluSx SINE Alu 1 147 -165 2115 128 0 0 chr17 81635301 81635605 -7868948 + AluSg SINE Alu 6 309 -1 1922 135 0 31 chr17 81635605 81635779 -7868774 + AluSx SINE Alu 147 308 -4 735 186 67 78 chr17 81635794 81636154 -7868399 - L1MB2 LINE L1 -18 6153 5798 2147 85 3 3 chr17 81636649 81636931 -7867622 + AluSp SINE Alu 15 296 -17 35 84 0 23 chr17 81637512 81637643 -7866910 + GC_rich Low_complexity Low_complexity 1 128 0 260 362 85 0 chr17 81638404 81638581 -7865972 + MIR SINE MIR 71 262 0 997 71 86 7 chr17 81639438 81639578 -7864975 - AluY SINE Alu -160 151 1 1058 59 0 0 chr17 81639580 81639716 -7864837 - AluSc SINE Alu 0 309 174 756 220 22 89 chr17 81639928 81640241 -7864312 - AluJb SINE Alu -1 311 20 218 32 32 0 chr17 81640702 81640733 -7863820 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2496 57 0 13 chr17 81640816 81641130 -7863423 - AluY SINE Alu -1 310 1 1044 184 97 52 chr17 81641230 81641379 -7863174 - AluJo SINE Alu -1 311 170 2213 110 7 7 chr17 81641379 81641689 -7862864 - AluSq SINE Alu -3 310 1 1044 184 97 52 chr17 81641689 81641701 -7862852 - AluJo SINE Alu -142 170 160 2240 98 0 3 chr17 81641701 81642006 -7862547 - AluSg SINE Alu -6 304 1 1044 184 97 52 chr17 81642006 81642110 -7862443 - AluJo SINE Alu -152 160 33 547 239 65 0 chr17 81642622 81642777 -7861776 + MIR SINE MIR 86 250 -12 266 169 15 0 chr17 81644236 81644301 -7860252 + CT-rich Low_complexity Low_complexity 2 67 0 293 92 23 69 chr17 81645277 81645364 -7859189 + (TCCC)n Simple_repeat Simple_repeat 1 83 0 289 278 41 10 chr17 81645498 81645595 -7858958 + L2 LINE L2 3158 3257 -15 2105 119 7 0 chr17 81645662 81645957 -7858596 + AluSp SINE Alu 5 301 -12 2483 47 0 0 chr17 81645957 81646254 -7858299 + AluY SINE Alu 1 297 -14 272 295 19 83 chr17 81646894 81647050 -7857503 - L3 LINE CR1 -18 1559 1414 1201 114 0 0 chr17 81647116 81647283 -7857270 - AluSq SINE Alu -13 300 134 2324 76 3 0 chr17 81647283 81647574 -7856979 - AluSp SINE Alu -21 292 1 1214 155 32 29 chr17 81647953 81648231 -7856322 - L1MB4 LINE L1 -102 6078 5800 2048 89 0 34 chr17 81648233 81648562 -7855991 - AluSx SINE Alu 0 319 1 1573 174 50 23 chr17 81648562 81648933 -7855620 - L1MB4 LINE L1 -501 5679 5305 2107 103 0 14 chr17 81648933 81649224 -7855329 - AluSx SINE Alu -25 287 1 26 0 0 0 chr17 81649234 81649260 -7855293 + AT_rich Low_complexity Low_complexity 1 26 0 268 174 0 0 chr17 81649260 81649306 -7855247 - AluSx SINE Alu -13 288 243 748 109 0 0 chr17 81649312 81649413 -7855140 + AluSg/x SINE Alu 153 253 -59 1337 159 8 50 chr17 81649413 81649525 -7855028 - AluSx SINE Alu -65 247 132 2213 117 0 0 chr17 81649525 81649832 -7854721 - AluSg SINE Alu -3 307 1 1337 159 8 50 chr17 81649832 81649977 -7854576 - AluSx SINE Alu -180 132 1 1336 183 137 11 chr17 81650008 81650270 -7854283 - AluJo SINE Alu -12 300 6 225 0 0 0 chr17 81650286 81650311 -7854242 + (T)n Simple_repeat Simple_repeat 1 25 0 557 160 9 0 chr17 81650420 81650526 -7854027 + CT-rich Low_complexity Low_complexity 4 110 0 1856 98 57 0 chr17 81650526 81650791 -7853762 - AluSx SINE Alu -32 280 1 1898 143 10 26 chr17 81651982 81652290 -7852263 + AluJo SINE Alu 1 303 -9 330 319 21 0 chr17 81653096 81653190 -7851363 + L1ME4a LINE L1 5813 5908 -213 2141 94 31 3 chr17 81653190 81653478 -7851075 + AluSx SINE Alu 1 296 -16 363 23 0 0 chr17 81657172 81657216 -7847337 + (GGA)n Simple_repeat Simple_repeat 3 46 0 2153 103 14 0 chr17 81659162 81659452 -7845101 + AluSg SINE Alu 1 294 -16 227 294 0 0 chr17 81659507 81659558 -7844995 + L2 LINE L2 3250 3300 -13 213 146 36 36 chr17 81660944 81660999 -7843554 + (CAGG)n Simple_repeat Simple_repeat 3 57 0 223 336 56 40 chr17 81661564 81661689 -7842864 + L2 LINE L2 3126 3252 -20 218 244 291 0 chr17 81662960 81663046 -7841507 - L2 LINE L2 -6 3307 3197 640 269 372 7 chr17 81663230 81663837 -7840716 - L2 LINE L2 -418 2896 2511 2011 98 34 3 chr17 81663837 81664134 -7840419 + AluSx SINE Alu 1 306 -6 1798 116 34 8 chr17 81664134 81664401 -7840152 + AluSx SINE Alu 1 274 -38 640 269 372 7 chr17 81664401 81664464 -7840089 - L2 LINE L2 -802 2512 1980 2299 48 48 0 chr17 81668525 81668814 -7835739 + AluY SINE Alu 1 303 -8 201 377 123 0 chr17 81672616 81672746 -7831807 - MIR3 SINE MIR -60 148 3 994 213 20 0 chr17 81672933 81673135 -7831418 + MER7A DNA MER2_type 39 242 -104 194 150 25 0 chr17 81674641 81674681 -7829872 + GA-rich Low_complexity Low_complexity 1 41 0 319 327 9 9 chr17 81678666 81678776 -7825777 + MIR3 SINE MIR 59 168 -40 2210 114 10 0 chr17 81678980 81679287 -7825266 + AluSq SINE Alu 1 310 -3 226 355 104 16 chr17 81679517 81679700 -7824853 + L3 LINE CR1 1087 1285 -292 182 355 124 16 chr17 81679769 81679890 -7824663 + L3 LINE CR1 1412 1545 -32 242 183 17 33 chr17 81681566 81681626 -7822927 + (CTG)n Simple_repeat Simple_repeat 3 61 0 410 317 121 20 chr17 81682618 81682817 -7821736 + MIR SINE MIR 44 262 0 201 139 0 0 chr17 81683395 81683438 -7821115 + (ATG)n Simple_repeat Simple_repeat 3 45 0 796 296 33 12 chr17 81683440 81683680 -7820873 - MIR SINE MIR -4 258 14 309 247 11 21 chr17 81684546 81684639 -7819914 + L2 LINE L2 2549 2640 -674 2292 106 3 7 chr17 81684802 81685105 -7819448 + AluSx SINE Alu 5 306 -6 1394 145 126 15 chr17 81685125 81685387 -7819166 + AluJb SINE Alu 18 308 -4 1259 99 6 39 chr17 81685440 81685621 -7818932 + AluSg/x SINE Alu 125 299 -13 496 259 90 21 chr17 81686099 81686288 -7818265 + MIR SINE MIR 4 205 -57 419 176 109 34 chr17 81686536 81686655 -7817898 - MER5B DNA MER1_type -10 168 41 240 292 31 10 chr17 81686689 81686785 -7817768 + L2 LINE L2 3191 3288 -25 470 296 177 57 chr17 81688824 81689141 -7815412 + L2 LINE L2 2804 3082 -190 2253 95 7 3 chr17 81689141 81689447 -7815106 - AluY SINE Alu -4 307 1 1773 156 3 65 chr17 81689447 81689768 -7814785 - AluJo SINE Alu -11 301 1 470 296 177 57 chr17 81689768 81689868 -7814685 + L2 LINE L2 3081 3272 0 279 198 198 50 chr17 81691197 81691298 -7813255 + MIR SINE MIR 24 139 -69 1878 135 87 7 chr17 81692115 81692404 -7812149 + AluSx SINE Alu 1 312 0 204 260 91 26 chr17 81692466 81692543 -7812010 - MER5B DNA MER1_type -72 106 25 2063 107 0 0 chr17 81692741 81693031 -7811522 + AluSx SINE Alu 22 311 0 2009 116 24 24 chr17 81694394 81694720 -7809833 + AluSx SINE Alu 3 312 0 984 258 114 35 chr17 81694732 81695361 -7809192 - HAL1 LINE L1 -211 2296 1618 1050 161 0 0 chr17 81695385 81695562 -7808991 - AluJo/FRAM SINE Alu 0 310 134 1758 207 7 0 chr17 81695562 81695866 -7808687 - AluJo SINE Alu -6 306 1 1661 78 5 0 chr17 81695942 81696146 -7808407 - AluSq SINE Alu -108 205 1 2480 65 0 3 chr17 81696146 81696439 -7808114 - AluY SINE Alu -19 292 1 1838 157 3 44 chr17 81696439 81696757 -7807796 - AluSx SINE Alu -7 305 1 243 222 0 0 chr17 81696805 81696850 -7807703 + MER5B DNA MER1_type 1 45 -133 2335 89 0 10 chr17 81696850 81697153 -7807400 - AluSp SINE Alu -13 300 1 422 204 71 18 chr17 81697190 81697303 -7807250 - L1 LINE L1 -1712 4434 4316 231 253 72 24 chr17 81697454 81697510 -7807043 - HAL1 LINE L1 -2364 143 80 2572 68 0 0 chr17 81697510 81697819 -7806734 - AluY SINE Alu -2 309 1 231 253 72 24 chr17 81697819 81697845 -7806708 - HAL1 LINE L1 -2427 80 57 1519 166 0 92 chr17 81697862 81698188 -7806365 + AluJo SINE Alu 1 296 -16 1691 185 26 17 chr17 81698242 81698544 -7806009 + AluJo SINE Alu 1 305 -7 2385 97 0 3 chr17 81698547 81698846 -7805707 + AluSc SINE Alu 5 302 -7 24 0 0 0 chr17 81698858 81698882 -7805671 + AT_rich Low_complexity Low_complexity 1 24 0 255 236 0 36 chr17 81699530 81699585 -7804968 + MIR SINE MIR 63 115 -147 446 259 238 16 chr17 81699600 81699793 -7804760 - MIR SINE MIR -10 252 17 2465 94 0 0 chr17 81699826 81700135 -7804418 - AluSc SINE Alu 0 309 1 1838 181 14 0 chr17 81700135 81700428 -7804125 - AluJo SINE Alu -14 298 2 2017 152 0 10 chr17 81700835 81701145 -7803408 - AluJb SINE Alu -5 307 1 598 200 170 24 chr17 81701146 81701311 -7803242 - Tigger3(Golem) DNA MER2_type -24 3005 2817 546 180 30 0 chr17 81701312 81701412 -7803141 - Tigger3(Golem) DNA MER2_type -2925 104 2 234 327 85 58 chr17 81701889 81702112 -7802441 - MIR SINE MIR -14 248 20 2250 99 3 3 chr17 81702654 81702947 -7801606 + AluSp SINE Alu 1 293 -20 1047 137 28 38 chr17 81703910 81704122 -7800431 - MER46B DNA MER2_type -1 235 26 328 0 24 0 chr17 81704122 81704164 -7800389 + L1PA6 LINE L1 6105 6147 -7 939 136 6 30 chr17 81704184 81704353 -7800200 - MER46B DNA MER2_type -195 41 2 384 298 68 60 chr17 81704366 81704548 -7800005 + MIR SINE MIR 13 199 -63 2460 90 3 0 chr17 81704548 81704860 -7799693 + AluSp SINE Alu 1 313 0 384 298 68 60 chr17 81704860 81704925 -7799628 + MIR SINE MIR 199 262 0 2359 122 0 0 chr17 81705406 81705718 -7798835 + AluSx SINE Alu 1 312 0 282 227 45 45 chr17 81705983 81706071 -7798482 + MIR SINE MIR 158 245 -17 2464 95 0 0 chr17 81706185 81706489 -7798064 + AluSg SINE Alu 1 304 -6 911 135 0 0 chr17 81706919 81707052 -7797501 + FLAM_C SINE Alu 1 133 0 259 337 11 19 chr17 81708643 81708775 -7795778 - MER5B DNA MER1_type -18 171 29 279 220 80 50 chr17 81708876 81708976 -7795577 + MIR3 SINE MIR 94 196 -12 1798 149 0 73 chr17 81709844 81710024 -7794529 - AluJo SINE Alu -7 305 158 2096 105 14 3 chr17 81710024 81710318 -7794235 - AluSx SINE Alu -15 297 1 1798 149 0 73 chr17 81710318 81710466 -7794087 - AluJo SINE Alu -154 158 1 2407 78 0 3 chr17 81710817 81711111 -7793442 + AluSc SINE Alu 1 293 -16 2154 113 7 26 chr17 81713450 81713759 -7790794 + AluSx SINE Alu 1 303 -9 2326 112 0 3 chr17 81715058 81715371 -7789182 - AluSx SINE Alu 0 312 1 1725 178 23 7 chr17 81715473 81715776 -7788777 - AluJb SINE Alu -2 310 3 2173 92 7 0 chr17 81715912 81716224 -7788329 - AluSq SINE Alu 0 314 1 2233 186 74 34 chr17 81716259 81716410 -7788143 - Charlie1a DNA MER1_type -1306 1455 1312 1983 157 0 7 chr17 81716410 81716703 -7787850 + AluJb SINE Alu 3 293 -19 2233 186 74 34 chr17 81716703 81717438 -7787115 - Charlie1a DNA MER1_type -1449 1312 431 1377 128 136 4 chr17 81717454 81717727 -7786826 + MER44D DNA MER2_type 30 608 -1 837 210 124 110 chr17 81717731 81717882 -7786671 - Charlie1a DNA MER1_type -2334 427 280 2405 84 17 0 chr17 81717882 81718178 -7786375 - AluSg SINE Alu -9 301 1 837 210 124 110 chr17 81718178 81718208 -7786345 - Charlie1a DNA MER1_type -2481 280 252 2006 115 3 47 chr17 81718208 81718504 -7786049 - AluSx SINE Alu -12 300 18 837 210 124 110 chr17 81718504 81718693 -7785860 - Charlie1a DNA MER1_type -2509 252 51 207 286 143 10 chr17 81718900 81718998 -7785555 + MIR SINE MIR 90 200 -62 1148 148 135 4 chr17 81719003 81719233 -7785320 + MER2 DNA MER2_type 1 260 -85 279 0 0 0 chr17 81719239 81719270 -7785283 + (CA)n Simple_repeat Simple_repeat 2 32 0 543 291 169 42 chr17 81719467 81719767 -7784786 + L3 LINE CR1 1116 1477 -100 2613 49 0 10 chr17 81719767 81720071 -7784482 - AluY SINE Alu -10 301 1 543 291 169 42 chr17 81720071 81720155 -7784398 + L3 LINE CR1 1477 1549 -28 190 340 10 10 chr17 81721185 81721282 -7783271 + MIR SINE MIR 30 126 -82 1894 157 3 7 chr17 81721527 81721827 -7782726 + AluJb SINE Alu 1 299 -13 277 281 99 25 chr17 81721925 81722046 -7782507 - MER119 DNA MER1_type -453 130 1 33 56 0 0 chr17 81722830 81722884 -7781669 + AT_rich Low_complexity Low_complexity 1 54 0 2302 78 3 3 chr17 81722964 81723246 -7781307 - AluSp SINE Alu -17 296 15 674 84 0 0 chr17 81723458 81723541 -7781012 + AluY SINE Alu 2 84 -227 2175 130 0 10 chr17 81724117 81724418 -7780135 - AluSx SINE Alu -12 300 3 189 0 0 0 chr17 81724423 81724444 -7780109 + (TAA)n Simple_repeat Simple_repeat 2 22 0 501 274 116 7 chr17 81725206 81725352 -7779201 + MIR SINE MIR 28 189 -73 2558 68 3 0 chr17 81727309 81727619 -7776934 + AluY SINE Alu 1 311 0 232 325 12 12 chr17 81728252 81728332 -7776221 + L2 LINE L2 3234 3313 0 2245 133 0 0 chr17 81728407 81728709 -7775844 + AluJo SINE Alu 1 302 -10 426 20 0 0 chr17 81728991 81729042 -7775511 + (TG)n Simple_repeat Simple_repeat 1 51 0 1433 123 161 0 chr17 81730222 81730458 -7774095 - AluSx SINE Alu 0 312 39 774 157 26 46 chr17 81731049 81731202 -7773351 + L1PB4 LINE L1 6004 6153 -3 24 0 0 0 chr17 81731205 81731229 -7773324 + AT_rich Low_complexity Low_complexity 1 24 0 814 135 14 8 chr17 81731490 81731697 -7772856 - AluJb SINE Alu -34 278 2 1409 229 34 27 chr17 81735978 81736225 -7768328 - L1ME1 LINE L1 -5 6161 5908 1233 182 14 5 chr17 81736225 81736439 -7768114 - MER20 DNA MER1_type 0 219 4 1409 229 34 27 chr17 81736439 81736598 -7767955 - L1ME1 LINE L1 -258 5908 5752 1961 138 0 38 chr17 81737333 81737652 -7766901 + AluSg SINE Alu 1 307 -3 2248 75 0 32 chr17 81737846 81738154 -7766399 - AluY SINE Alu -7 304 7 225 175 25 0 chr17 81739024 81739064 -7765489 + L2 LINE L2 3225 3265 -7 1004 180 38 43 chr17 81739755 81739966 -7764587 - MER63A DNA MER1_type 0 210 1 1531 159 78 4 chr17 81739994 81740251 -7764302 + AluJo SINE Alu 1 276 -36 1664 173 40 3 chr17 81740275 81740576 -7763977 - AluSx SINE Alu 0 312 1 357 291 36 0 chr17 81740633 81740743 -7763810 + L2 LINE L2 2947 3060 -253 2053 114 7 10 chr17 81743108 81743407 -7761146 - AluSc SINE Alu -11 298 1 257 243 230 46 chr17 81743869 81744021 -7760532 + MIR3 SINE MIR 22 201 -7 349 358 122 15 chr17 81745012 81745339 -7759214 - L2 LINE L2 -2 3311 2950 385 302 87 48 chr17 81745409 81745661 -7758892 + Charlie8 DNA MER1_type 1 262 -2155 220 200 0 0 chr17 81747120 81747165 -7757388 + (CCA)n Simple_repeat Simple_repeat 3 47 0 266 284 175 22 chr17 81748937 81749120 -7755433 + MIR SINE MIR 2 212 -50 294 400 17 0 chr17 81749367 81749487 -7755066 + MIR SINE MIR 22 143 -119 239 229 52 31 chr17 81750142 81750238 -7754315 + L1MC5 LINE L1 7820 7917 -44 2380 70 0 7 chr17 81750261 81750560 -7753993 + AluY SINE Alu 1 297 -14 1159 88 0 0 chr17 81750560 81750708 -7753845 + AluSq SINE Alu 137 284 -29 432 289 58 45 chr17 81750722 81750757 -7753796 + L1MC4a LINE L1 5793 5826 -1982 1949 127 3 10 chr17 81750757 81751057 -7753496 + AluSq SINE Alu 1 298 -15 2086 124 0 3 chr17 81751060 81751366 -7753187 + AluSg SINE Alu 1 305 -5 432 289 58 45 chr17 81751366 81751482 -7753071 + L1MC4a LINE L1 5827 5950 -1858 1971 132 10 3 chr17 81751492 81751787 -7752766 + AluSx SINE Alu 1 297 -15 874 200 12 0 chr17 81751789 81751954 -7752599 + AluJo/FRAM SINE Alu 137 303 -9 338 302 101 58 chr17 81751954 81752093 -7752460 + L1MC4a LINE L1 6506 6650 -1158 579 226 113 76 chr17 81752133 81752406 -7752147 + L1MC4 LINE L1 6729 7017 -1025 2299 95 0 3 chr17 81752406 81752711 -7751842 - AluSx SINE Alu -8 304 1 579 226 113 76 chr17 81752711 81752765 -7751788 + L1MC4 LINE L1 7017 7068 -974 317 203 75 2 chr17 81752827 81752920 -7751633 + L1MB2 LINE L1 5499 5596 -587 970 146 43 0 chr17 81752921 81753085 -7751468 - FRAM SINE Alu -14 162 1 1959 138 10 0 chr17 81753094 81753383 -7751170 - AluSx SINE Alu -20 292 1 3086 133 43 37 chr17 81753385 81753948 -7750605 + L1MB2 LINE L1 5588 6153 -18 2163 110 0 10 chr17 81753963 81754273 -7750280 - AluY SINE Alu -4 307 1 21 0 0 0 chr17 81754277 81754298 -7750255 + AT_rich Low_complexity Low_complexity 1 21 0 2024 127 3 13 chr17 81754461 81754775 -7749778 + AluSx SINE Alu 1 311 -1 2171 98 3 14 chr17 81754794 81755118 -7749435 + AluY SINE Alu 1 311 0 426 179 36 0 chr17 81755173 81755257 -7749296 - Tigger5 DNA MER2_type 0 2323 2237 310 227 0 0 chr17 81755403 81755469 -7749084 + L1MC4 LINE L1 7192 7257 -785 2027 127 0 34 chr17 81755512 81755696 -7748857 - AluSx SINE Alu 0 312 142 2169 121 0 0 chr17 81755696 81756001 -7748552 - AluSg SINE Alu 0 310 6 2027 127 0 34 chr17 81756001 81756139 -7748414 - AluSx SINE Alu -170 142 1 1273 161 77 23 chr17 81756154 81756415 -7748138 - AluJo SINE Alu -16 296 22 2277 70 0 0 chr17 81756423 81756709 -7747844 - AluY SINE Alu -4 307 22 2428 60 0 0 chr17 81756717 81757015 -7747538 - AluY SINE Alu -13 298 1 425 239 122 11 chr17 81757025 81757205 -7747348 + L1MC4a LINE L1 7215 7414 -394 276 318 95 47 chr17 81757292 81757367 -7747186 + L1MC4 LINE L1 7494 7564 -478 1882 129 7 24 chr17 81757367 81757662 -7746891 + AluSx SINE Alu 1 290 -22 2335 59 0 26 chr17 81757671 81757975 -7746578 + AluY SINE Alu 1 296 -15 276 318 95 47 chr17 81757975 81758184 -7746369 + L1MC4 LINE L1 7571 7768 -274 2138 103 10 3 chr17 81758184 81758476 -7746077 + AluSq SINE Alu 1 294 -19 276 318 95 47 chr17 81758476 81758674 -7745879 + L1MC4 LINE L1 7768 8011 -31 1780 162 0 14 chr17 81758676 81758966 -7745587 + AluJb SINE Alu 5 290 -22 2338 92 3 0 chr17 81759204 81759508 -7745045 + AluSx SINE Alu 1 305 -7 195 303 242 10 chr17 81759567 81759666 -7744887 + L2 LINE L2 3151 3272 0 2067 136 3 0 chr17 81759884 81760185 -7744368 + AluSx SINE Alu 1 302 -10 183 376 59 0 chr17 81760911 81761012 -7743541 - MIR SINE MIR -78 184 78 * 427 289 132 73 chr17 81760998 81761285 -7743268 - L2 LINE L2 -3 3269 2966 2120 97 47 0 chr17 81761402 81761700 -7742853 + AluSx SINE Alu 1 312 0 315 0 0 0 chr17 81763837 81763872 -7740681 + (TG)n Simple_repeat Simple_repeat 2 36 0 286 293 133 0 chr17 81764193 81764343 -7740210 + MIR SINE MIR 10 179 -83 230 319 40 41 chr17 81765577 81765756 -7738797 + MIR SINE MIR 17 197 -60 383 227 0 0 chr17 81766283 81766358 -7738195 - MER63 DNA MER1_type -306 756 682 1567 170 22 22 chr17 81766410 81766686 -7737867 - AluJb SINE Alu -30 282 7 309 297 113 59 chr17 81766840 81767096 -7737457 - L2 LINE L2 -21 3251 2982 206 196 244 12 chr17 81767156 81767247 -7737306 + MIR SINE MIR 37 146 -83 1577 138 104 4 chr17 81767249 81767518 -7737035 + AluJo SINE Alu 1 296 -16 2214 111 3 0 chr17 81767528 81767835 -7736718 + AluSx SINE Alu 1 308 -4 2322 83 0 0 chr17 81767870 81768170 -7736383 + AluY SINE Alu 1 300 -11 2137 105 0 16 chr17 81769644 81769780 -7734773 + AluSx SINE Alu 1 138 -174 2526 62 0 0 chr17 81769780 81770086 -7734467 + AluY SINE Alu 1 306 -5 2137 105 0 16 chr17 81770086 81770253 -7734300 + AluSx SINE Alu 138 299 -13 1107 124 25 0 chr17 81770944 81771105 -7733448 + AluJo SINE Alu 6 170 -142 485 103 0 13 chr17 81771651 81771729 -7732824 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 194 273 0 0 chr17 81771853 81771897 -7732656 + MIR SINE MIR 112 155 -107 221 315 194 18 chr17 81772507 81772672 -7731881 + MIR SINE MIR 4 197 -65 401 203 56 56 chr17 81773729 81773872 -7730681 + MIR3 SINE MIR 3 145 -63 2230 90 10 3 chr17 81773878 81774178 -7730375 + AluSq SINE Alu 1 302 -11 2430 58 7 0 chr17 81774180 81774475 -7730078 + AluY SINE Alu 1 297 -14 207 0 0 0 chr17 81774476 81774499 -7730054 + (TTAAA)n Simple_repeat Simple_repeat 4 26 0 248 226 113 70 chr17 81774848 81774963 -7729590 + MIR SINE MIR 20 139 -69 2236 86 3 52 chr17 81775201 81775526 -7729027 - AluSq SINE Alu -4 309 1 425 250 5 85 chr17 81776029 81776153 -7728400 - L1M4 LINE L1 -1828 4318 4186 207 0 0 0 chr17 81776153 81776176 -7728377 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 2149 100 3 0 chr17 81776176 81776460 -7728093 - AluSx SINE Alu -27 285 1 425 250 5 85 chr17 81776460 81776475 -7728078 - L1M4 LINE L1 -1959 4187 4172 2421 81 0 0 chr17 81776475 81776782 -7727771 - AluSc SINE Alu 0 309 3 425 250 5 85 chr17 81776782 81776845 -7727708 - L1M4 LINE L1 -1974 4172 4135 298 306 16 48 chr17 81776846 81776970 -7727583 - L2 LINE L2 -559 2755 2636 200 270 0 22 chr17 81778583 81778672 -7725881 + CT-rich Low_complexity Low_complexity 3 89 0 600 247 190 0 chr17 81779085 81779259 -7725294 + MIR SINE MIR 34 240 -22 1008 145 50 0 chr17 81779902 81780061 -7724492 + FRAM SINE Alu 1 166 -10 2075 128 3 0 chr17 81780094 81780392 -7724161 + AluSx SINE Alu 10 308 -4 340 225 45 36 chr17 81780392 81780503 -7724050 + MER103 DNA DNA 54 165 -1 239 306 99 18 chr17 81782230 81782341 -7722212 - L2 LINE L2 -3 3269 3150 2266 100 0 0 chr17 81782593 81782893 -7721660 + AluSx SINE Alu 1 300 -12 932 309 12 12 chr17 81782897 81783149 -7721404 - MIR SINE MIR -5 257 6 187 321 78 46 chr17 81783150 81783306 -7721247 - MIR SINE MIR -63 145 16 336 294 163 5 chr17 81783848 81784053 -7720500 + MIR SINE MIR 15 250 -12 2250 98 0 0 chr17 81784307 81784602 -7719951 - AluSx SINE Alu -17 295 1 2476 59 3 0 chr17 81785181 81785487 -7719066 - AluSp SINE Alu -6 307 1 1407 181 112 18 chr17 81785856 81786132 -7718421 - AluJb SINE Alu 0 302 1 1993 130 0 37 chr17 81786321 81786505 -7718048 - AluSx SINE Alu -1 311 143 2182 118 0 0 chr17 81786505 81786809 -7717744 - AluSg SINE Alu -1 309 6 1993 130 0 37 chr17 81786809 81786947 -7717606 - AluSx SINE Alu -169 143 1 1314 153 77 23 chr17 81786962 81787223 -7717330 - AluJo SINE Alu -16 296 22 2277 70 0 0 chr17 81787231 81787517 -7717036 - AluY SINE Alu -4 307 22 2415 64 0 0 chr17 81787525 81787823 -7716730 - AluY SINE Alu -13 298 1 425 239 122 11 chr17 81787833 81788013 -7716540 + L1MC4a LINE L1 7215 7414 -394 276 318 95 47 chr17 81788100 81788175 -7716378 + L1MC4 LINE L1 7494 7564 -478 1882 129 7 24 chr17 81788175 81788470 -7716083 + AluSx SINE Alu 1 290 -22 2321 62 0 26 chr17 81788479 81788783 -7715770 + AluY SINE Alu 1 296 -15 276 318 95 47 chr17 81788783 81788992 -7715561 + L1MC4 LINE L1 7571 7768 -274 2138 103 10 3 chr17 81788992 81789284 -7715269 + AluSq SINE Alu 1 294 -19 276 318 95 47 chr17 81789284 81789482 -7715071 + L1MC4 LINE L1 7768 8011 -31 1780 162 0 14 chr17 81789484 81789774 -7714779 + AluJb SINE Alu 5 290 -22 2331 92 3 0 chr17 81790012 81790315 -7714238 + AluSx SINE Alu 1 304 -8 195 303 242 10 chr17 81790374 81790473 -7714080 + L2 LINE L2 3151 3272 0 2067 136 3 0 chr17 81790691 81790992 -7713561 + AluSx SINE Alu 1 302 -10 183 376 59 0 chr17 81791718 81791819 -7712734 - MIR SINE MIR -78 184 78 * 427 289 132 73 chr17 81791805 81792092 -7712461 - L2 LINE L2 -3 3269 2966 2120 97 47 0 chr17 81792209 81792507 -7712046 + AluSx SINE Alu 1 312 0 369 0 0 0 chr17 81794648 81794689 -7709864 + (TG)n Simple_repeat Simple_repeat 2 42 0 286 305 126 0 chr17 81795010 81795161 -7709392 + MIR SINE MIR 10 179 -83 224 327 40 41 chr17 81796395 81796574 -7707979 + MIR SINE MIR 17 197 -60 383 227 0 0 chr17 81797101 81797176 -7707377 - MER63 DNA MER1_type -306 756 682 1567 170 22 22 chr17 81797228 81797504 -7707049 - AluJb SINE Alu -30 282 7 309 297 113 59 chr17 81797658 81797914 -7706639 - L2 LINE L2 -21 3251 2982 206 196 244 12 chr17 81797974 81798065 -7706488 + MIR SINE MIR 37 146 -83 1577 138 104 4 chr17 81798067 81798336 -7706217 + AluJo SINE Alu 1 296 -16 2214 111 3 0 chr17 81798346 81798653 -7705900 + AluSx SINE Alu 1 308 -4 2322 83 0 0 chr17 81798688 81798988 -7705565 + AluY SINE Alu 1 300 -11 2129 106 0 16 chr17 81800463 81800599 -7703954 + AluSx SINE Alu 1 138 -174 2514 65 0 0 chr17 81800599 81800905 -7703648 + AluY SINE Alu 1 306 -5 2129 106 0 16 chr17 81800905 81801071 -7703482 + AluSx SINE Alu 138 298 -14 1107 124 25 0 chr17 81801762 81801923 -7702630 + AluJo SINE Alu 6 170 -142 341 115 0 16 chr17 81802481 81802542 -7702011 + (TCCC)n Simple_repeat Simple_repeat 2 61 0 194 273 0 0 chr17 81802674 81802718 -7701835 + MIR SINE MIR 112 155 -107 221 315 194 18 chr17 81803329 81803494 -7701059 + MIR SINE MIR 4 197 -65 401 203 56 56 chr17 81804554 81804697 -7699856 + MIR3 SINE MIR 3 145 -63 2206 93 10 3 chr17 81804703 81805003 -7699550 + AluSq SINE Alu 1 302 -11 2426 61 7 0 chr17 81805005 81805301 -7699252 + AluY SINE Alu 1 298 -13 207 0 0 0 chr17 81805302 81805325 -7699228 + (TTAAA)n Simple_repeat Simple_repeat 4 26 0 248 226 113 70 chr17 81805674 81805789 -7698764 + MIR SINE MIR 20 139 -69 2221 87 3 53 chr17 81806027 81806350 -7698203 - AluSq SINE Alu -6 307 1 431 251 5 80 chr17 81806853 81806977 -7697576 - L1M4 LINE L1 -1828 4318 4186 207 0 0 0 chr17 81806977 81807000 -7697553 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 2131 104 3 0 chr17 81807000 81807284 -7697269 - AluSx SINE Alu -27 285 1 431 251 5 80 chr17 81807284 81807298 -7697255 - L1M4 LINE L1 -1959 4187 4174 2421 81 0 0 chr17 81807298 81807605 -7696948 - AluSc SINE Alu 0 309 3 431 251 5 80 chr17 81807605 81807668 -7696885 - L1M4 LINE L1 -1972 4174 4135 298 306 16 48 chr17 81807669 81807793 -7696760 - L2 LINE L2 -559 2755 2636 200 270 0 22 chr17 81809406 81809495 -7695058 + CT-rich Low_complexity Low_complexity 3 89 0 600 247 190 0 chr17 81809908 81810082 -7694471 + MIR SINE MIR 34 240 -22 181 300 57 50 chr17 81810488 81810628 -7693925 - L2 LINE L2 -26 3246 3106 1008 145 50 0 chr17 81810727 81810886 -7693667 + FRAM SINE Alu 1 166 -10 2000 139 3 0 chr17 81810919 81811220 -7693333 + AluSx SINE Alu 10 311 -1 1215 144 0 11 chr17 81811286 81811473 -7693080 - AluY SINE Alu -126 185 1 1953 143 3 0 chr17 81811569 81811863 -7692690 - AluSc SINE Alu -14 295 1 3452 108 95 80 chr17 81811911 81812794 -7691759 - pTR5 LTR ERV1 0 2438 1231 564 161 115 31 chr17 81812847 81812977 -7691576 - FLAM_A SINE Alu -1 141 1 2069 117 3 19 chr17 81812980 81813288 -7691265 - AluSx SINE Alu -9 303 1 262 263 116 0 chr17 81813385 81813480 -7691073 - MIR SINE MIR -60 202 97 833 217 0 0 chr17 81813489 81813646 -7690907 + FRAM SINE Alu 13 169 -7 2270 89 0 16 chr17 81813662 81813966 -7690587 + AluY SINE Alu 1 299 -12 2173 83 7 3 chr17 81813977 81814265 -7690288 + AluSg SINE Alu 2 290 -20 182 240 0 93 chr17 81814395 81814470 -7690083 + MIR SINE MIR 31 98 -164 617 233 81 12 chr17 81814722 81814894 -7689659 - MIR SINE MIR -18 244 61 1510 148 67 42 chr17 81814991 81815135 -7689418 + AluJo SINE Alu 1 140 -172 2132 106 7 0 chr17 81815135 81815428 -7689125 + AluSg SINE Alu 1 295 -15 1510 148 67 42 chr17 81815428 81815567 -7688986 + AluJo SINE Alu 140 291 -21 831 194 6 18 chr17 81815577 81815747 -7688806 + AluJb SINE Alu 135 302 -10 2292 81 3 0 chr17 81815939 81816234 -7688319 - AluSg SINE Alu -14 296 1 2414 66 3 0 chr17 81816329 81816634 -7687919 - AluY SINE Alu -5 306 1 369 310 83 41 chr17 81816661 81816903 -7687650 - Charlie7 DNA MER1_type -1921 691 440 2090 121 7 0 chr17 81816906 81817204 -7687349 - AluSx SINE Alu -12 300 1 930 118 7 7 chr17 81817204 81817339 -7687214 - AluSq/x SINE Alu -178 135 1 1720 99 65 48 chr17 81820778 81820934 -7683619 - AluSg SINE Alu -12 298 133 2427 53 0 7 chr17 81820934 81821234 -7683319 - AluY SINE Alu -13 298 1 1720 99 65 48 chr17 81821234 81821370 -7683183 - AluSg SINE Alu -177 133 1 391 327 39 7 chr17 81822192 81822345 -7682208 - MIR SINE MIR -78 184 27 280 349 35 0 chr17 81822900 81822986 -7681567 - MIR SINE MIR -92 170 82 2273 84 7 3 chr17 81823796 81824095 -7680458 - AluSx SINE Alu -12 300 1 211 309 0 15 chr17 81825183 81825251 -7679302 + MER5A DNA MER1_type 83 149 -40 214 325 24 12 chr17 81825558 81825641 -7678912 + L2 LINE L2 3229 3312 -1 2088 135 3 6 chr17 81825644 81825956 -7678597 - AluJb SINE Alu -1 311 1 1347 82 0 0 chr17 81825956 81826126 -7678427 - AluSg/x SINE Alu -9 303 134 2213 92 10 3 chr17 81826126 81826432 -7678121 - AluSq SINE Alu -5 308 1 328 271 99 112 chr17 81826468 81826922 -7677631 + L2 LINE L2 2036 2483 -831 467 287 49 14 chr17 81826941 81827084 -7677469 + MER58A DNA MER1_type 2 149 0 477 318 174 0 chr17 81827162 81827467 -7677086 + L2 LINE L2 2530 2887 -427 354 272 295 24 chr17 81827500 81827754 -7676799 + L2 LINE L2 2973 3295 -18 1844 163 3 3 chr17 81828736 81829036 -7675517 - AluJo SINE Alu -12 300 1 183 235 0 20 chr17 81830028 81830079 -7674474 + MIR SINE MIR 81 130 -78 2162 122 0 3 chr17 81830747 81831050 -7673503 + AluSx SINE Alu 1 302 -10 309 320 80 16 chr17 81831205 81831330 -7673223 + L1ME3 LINE L1 5999 6131 -31 2098 101 0 7 chr17 81831682 81831978 -7672575 - AluSx SINE Alu -18 294 1 1557 143 31 15 chr17 81831981 81832240 -7672313 - AluJo SINE Alu -15 297 35 232 291 13 0 chr17 81832303 81832382 -7672171 - L1ME LINE L1 -365 5756 5677 2193 87 14 0 chr17 81832485 81832771 -7671782 + AluSx SINE Alu 1 290 -22 252 0 0 0 chr17 81832786 81832814 -7671739 + (T)n Simple_repeat Simple_repeat 1 28 0 2191 98 3 0 chr17 81832831 81833118 -7671435 + AluSp SINE Alu 1 288 -25 210 37 0 0 chr17 81833121 81833148 -7671405 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 301 186 39 54 chr17 81834591 81834720 -7669833 + (GGGTG)n Simple_repeat Simple_repeat 5 131 0 830 172 0 15 chr17 81836356 81836490 -7668063 + AluJo/FLAM SINE Alu 1 132 -170 1892 112 0 12 chr17 81836491 81836750 -7667803 - AluSx SINE Alu -25 287 32 24 0 0 0 chr17 81836750 81836774 -7667779 + AT_rich Low_complexity Low_complexity 1 24 0 1841 124 0 12 chr17 81839423 81839682 -7664871 + AluSx SINE Alu 32 287 -25 837 170 0 15 chr17 81839682 81839844 -7664709 - FLAM_C SINE Alu -6 420 1 334 207 41 53 chr17 81841479 81841648 -7662905 + (CACCC)n Simple_repeat Simple_repeat 5 171 0 210 37 0 0 chr17 81843092 81843119 -7661434 + (TTATA)n Simple_repeat Simple_repeat 4 30 0 2213 94 3 0 chr17 81843122 81843409 -7661144 - AluSp SINE Alu -25 288 1 216 67 0 0 chr17 81843427 81843457 -7661096 + (A)n Simple_repeat Simple_repeat 1 30 0 2179 91 14 0 chr17 81843459 81843745 -7660808 - AluSx SINE Alu -22 290 1 232 291 13 0 chr17 81843850 81843929 -7660624 + L1ME LINE L1 5677 5756 -365 1557 143 31 15 chr17 81843992 81844251 -7660302 + AluJo SINE Alu 35 297 -15 2085 105 0 7 chr17 81844254 81844550 -7660003 + AluSx SINE Alu 1 294 -18 309 320 80 16 chr17 81844903 81845028 -7659525 - L1ME3 LINE L1 -31 6131 5999 2180 119 0 3 chr17 81845183 81845486 -7659067 - AluSx SINE Alu -10 302 1 1852 163 3 3 chr17 81847197 81847498 -7657055 + AluJo SINE Alu 1 301 -11 354 272 295 24 chr17 81848480 81848734 -7655819 - L2 LINE L2 -18 3295 2973 485 318 174 0 chr17 81848767 81849072 -7655481 - L2 LINE L2 -427 2887 2530 467 287 49 14 chr17 81849150 81849293 -7655260 - MER58A DNA MER1_type 0 149 2 320 271 99 112 chr17 81849312 81849766 -7654787 - L2 LINE L2 -831 2483 2036 2227 88 10 3 chr17 81849802 81850108 -7654445 + AluSq SINE Alu 1 308 -5 1347 82 0 0 chr17 81850108 81850278 -7654275 + AluSg/x SINE Alu 132 301 -9 2092 135 3 6 chr17 81850278 81850590 -7653963 + AluJb SINE Alu 1 311 -1 214 325 24 12 chr17 81850593 81850676 -7653877 - L2 LINE L2 -1 3312 3229 211 309 0 15 chr17 81850983 81851051 -7653502 - MER5A DNA MER1_type -40 149 83 2257 84 7 3 chr17 81852139 81852436 -7652117 + AluSx SINE Alu 1 298 -14 280 349 35 0 chr17 81853246 81853332 -7651221 + MIR SINE MIR 82 170 -92 402 320 39 7 chr17 81853887 81854040 -7650513 + MIR SINE MIR 27 184 -78 1714 99 65 51 chr17 81854862 81854999 -7649554 + AluSg SINE Alu 1 135 -175 2453 53 0 7 chr17 81854999 81855302 -7649251 + AluY SINE Alu 1 301 -10 1714 99 65 51 chr17 81855302 81855458 -7649095 + AluSg SINE Alu 135 298 -12 1001 110 0 7 chr17 81858899 81859035 -7645518 + AluSq/x SINE Alu 1 135 -177 2066 125 7 0 chr17 81859035 81859332 -7645221 + AluSx SINE Alu 1 299 -13 363 303 86 43 chr17 81859334 81859568 -7644985 + Charlie7 DNA MER1_type 440 683 -1929 2286 76 10 3 chr17 81859603 81859907 -7644646 + AluY SINE Alu 1 306 -5 2292 81 3 0 chr17 81860002 81860297 -7644256 + AluSg SINE Alu 1 296 -14 831 194 6 18 chr17 81860489 81860659 -7643894 - AluJb SINE Alu -10 302 135 1510 148 67 42 chr17 81860669 81860808 -7643745 - AluJo SINE Alu -21 291 157 2146 102 7 0 chr17 81860808 81861101 -7643452 - AluSg SINE Alu -15 295 1 1510 148 67 42 chr17 81861101 81861245 -7643308 - AluJo SINE Alu -155 157 1 617 233 81 12 chr17 81861342 81861514 -7643039 + MIR SINE MIR 61 244 -18 182 240 0 93 chr17 81861766 81861841 -7642712 - MIR SINE MIR -164 98 31 2173 83 7 3 chr17 81861971 81862259 -7642294 - AluSg SINE Alu -20 290 2 2276 86 0 16 chr17 81862270 81862573 -7641980 - AluY SINE Alu -13 298 1 833 217 0 0 chr17 81862589 81862746 -7641807 - FRAM SINE Alu -7 169 13 262 263 116 0 chr17 81862755 81862850 -7641703 + MIR SINE MIR 97 202 -60 2069 117 3 19 chr17 81862947 81863255 -7641298 + AluSx SINE Alu 1 303 -9 564 161 115 31 chr17 81863258 81863388 -7641165 + FLAM_A SINE Alu 1 141 -1 3452 108 95 80 chr17 81863441 81864324 -7640229 + pTR5 LTR ERV1 1231 2438 0 859 147 28 104 chr17 81864332 81864372 -7640181 + LTR54 LTR ERV1 279 320 -190 1967 139 3 0 chr17 81864372 81864666 -7639887 + AluSc SINE Alu 1 295 -14 859 147 28 104 chr17 81864666 81864828 -7639725 + LTR54 LTR ERV1 320 461 -49 2067 115 14 0 chr17 81864828 81865124 -7639429 - AluSx SINE Alu -12 300 1 859 147 28 104 chr17 81865124 81865171 -7639382 + LTR54 LTR ERV1 461 510 0 389 274 222 0 chr17 81865197 81865350 -7639203 + MIR SINE MIR 28 214 -48 1697 75 0 0 chr17 81865350 81865562 -7638991 + AluY SINE Alu 85 296 -15 1268 118 5 11 chr17 81865658 81865844 -7638709 + AluY SINE Alu 1 185 -126 1592 157 26 46 chr17 81865922 81866090 -7638463 - AluJo SINE Alu -13 299 138 2232 95 10 0 chr17 81866090 81866385 -7638168 - AluSx SINE Alu -14 298 1 1592 157 26 46 chr17 81866385 81866521 -7638032 - AluJo SINE Alu -174 138 1 2329 99 0 0 chr17 81866545 81866848 -7637705 + AluSg SINE Alu 1 303 -7 675 263 117 4 chr17 81866899 81867146 -7637407 - L1ME3A LINE L1 -118 6052 5778 1975 112 21 0 chr17 81867758 81868044 -7636509 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr17 81868181 81868209 -7636344 + AT_rich Low_complexity Low_complexity 1 28 0 749 172 107 49 chr17 81868209 81868338 -7636215 - L1MA4 LINE L1 -7 6293 6173 2656 62 24 3 chr17 81868338 81868675 -7635878 - LTR14A LTR ERVK 0 344 1 749 172 107 49 chr17 81868675 81868789 -7635764 - L1MA4 LINE L1 -127 6173 6036 349 259 142 62 chr17 81868801 81869014 -7635539 + L1MC4a LINE L1 5506 5700 -421 2188 124 0 0 chr17 81869014 81869321 -7635232 - AluSx SINE Alu -5 307 1 349 259 142 62 chr17 81869321 81869564 -7634989 + L1MC4a LINE L1 5700 5513 -608 1935 84 6 92 chr17 81869564 81869899 -7634654 - AluY SINE Alu -5 306 1 349 259 142 62 chr17 81869899 81870050 -7634503 + L1MC4a LINE L1 5512 5649 -472 24 32 0 0 chr17 81870969 81871000 -7633553 + GC_rich Low_complexity Low_complexity 1 31 0 301 218 0 102 chr17 81871904 81872101 -7632452 + G-rich Low_complexity Low_complexity 3 179 0 211 234 245 11 chr17 81873098 81873192 -7631361 - MIR3 SINE MIR -52 156 41 204 259 130 0 chr17 81875557 81875611 -7628942 - MIR SINE MIR -91 171 111 920 118 0 15 chr17 81875685 81875820 -7628733 + FLAM_C SINE Alu 1 133 0 1997 136 0 26 chr17 81875837 81875966 -7628587 + AluJb SINE Alu 9 140 -172 1758 105 0 58 chr17 81875966 81876243 -7628310 + AluSx SINE Alu 44 304 -8 2197 119 3 0 chr17 81876245 81876548 -7628005 + AluSq SINE Alu 1 304 -9 1997 136 0 26 chr17 81876548 81876724 -7627829 + AluJb SINE Alu 141 309 -3 379 335 53 11 chr17 81876730 81876918 -7627635 - MIR SINE MIR -20 242 47 521 290 28 0 chr17 81878067 81878212 -7626341 + MIR SINE MIR 63 211 -51 330 218 92 11 chr17 81880135 81880222 -7624331 - L2 LINE L2 -38 3234 3141 1693 167 29 13 chr17 81880248 81880554 -7623999 + AluJb SINE Alu 1 311 -1 879 47 0 0 chr17 81880766 81880900 -7623653 + AluSc SINE Alu 174 307 0 1801 65 192 0 chr17 81880902 81881162 -7623391 + AluY SINE Alu 1 310 -1 835 146 0 22 chr17 81881666 81881803 -7622750 - AluJo SINE Alu -178 134 1 2081 92 13 43 chr17 81881885 81882190 -7622363 - AluY SINE Alu -15 296 1 1071 79 79 7 chr17 81882230 81882382 -7622171 + AluY SINE Alu 1 163 -148 1815 182 0 0 chr17 81882515 81882812 -7621741 + AluJb SINE Alu 1 297 -15 741 185 0 30 chr17 81882856 81882991 -7621562 + AluJo/FLAM SINE Alu 1 131 -171 727 172 0 30 chr17 81882867 81883001 -7621552 + FLAM_C SINE Alu 12 141 -2 2139 123 0 0 chr17 81883001 81883301 -7621252 + AluSx SINE Alu 1 300 -12 1106 186 19 9 chr17 81883486 81883645 -7620908 - AluJo SINE Alu -16 296 133 2043 89 38 7 chr17 81883645 81883936 -7620617 - AluSg SINE Alu -10 300 1 1106 186 19 9 chr17 81883936 81883986 -7620567 - AluJo SINE Alu -179 133 85 1927 126 41 7 chr17 81884190 81884483 -7620070 + AluSx SINE Alu 1 303 -9 275 242 113 0 chr17 81884523 81884647 -7619906 - L1MC4 LINE L1 0 8042 7905 2174 117 3 0 chr17 81884729 81885036 -7619517 + AluSp SINE Alu 1 308 -5 383 169 140 59 chr17 81885068 81885204 -7619349 - L1MC4 LINE L1 -330 7712 7566 983 110 75 0 chr17 81885204 81885350 -7619203 - AluSg/x SINE Alu -23 289 133 1784 135 14 17 chr17 81885621 81885917 -7618636 + AluJo SINE Alu 11 305 -7 2194 131 0 0 chr17 81885920 81886232 -7618321 + AluSx SINE Alu 1 312 0 967 140 21 62 chr17 81886645 81886777 -7617776 + MER53 DNA DNA 5 128 -61 1799 176 3 0 chr17 81886777 81887072 -7617481 + AluJb SINE Alu 1 296 -16 967 140 21 62 chr17 81887072 81887132 -7617421 + MER53 DNA DNA 128 189 0 227 143 184 0 chr17 81888964 81889013 -7615540 + MER53 DNA DNA 3 60 -129 1572 148 39 0 chr17 81889033 81889290 -7615263 + AluSx SINE Alu 34 300 -12 281 339 42 8 chr17 81890554 81890672 -7613881 + MIR SINE MIR 37 158 -104 328 257 100 10 chr17 81890927 81891062 -7613491 - MIR SINE MIR -60 148 12 21 0 0 0 chr17 81891244 81891265 -7613288 + GC_rich Low_complexity Low_complexity 1 21 0 300 280 0 0 chr17 81892442 81892542 -7612011 + (CA)n Simple_repeat Simple_repeat 2 101 0 297 276 186 45 chr17 81893643 81893799 -7610754 - MER91A DNA MER1_type -1 195 18 2142 96 0 0 chr17 81896673 81896980 -7607573 + AluSx SINE Alu 5 311 0 275 302 233 47 chr17 81897396 81897568 -7606985 + MIR SINE MIR 17 220 -42 1897 149 3 20 chr17 81897621 81897922 -7606631 - AluJb SINE Alu -16 296 1 1944 121 0 51 chr17 81898001 81898316 -7606237 + AluSx SINE Alu 1 299 -13 592 214 17 0 chr17 81898327 81898444 -7606109 + FLAM_A SINE Alu 15 133 -9 2074 121 0 0 chr17 81898445 81898768 -7605785 + AluSg SINE Alu 1 323 0 2160 114 10 0 chr17 81898863 81899169 -7605384 + AluSg SINE Alu 1 309 -1 2091 100 0 7 chr17 81899264 81899555 -7604998 + AluSq SINE Alu 6 294 -19 1733 162 28 0 chr17 81899566 81899850 -7604703 + AluJo SINE Alu 1 292 -20 392 191 154 15 chr17 81899908 81900044 -7604509 + L1ME4a LINE L1 5965 6119 -2 364 269 17 34 chr17 81901185 81901304 -7603249 + MIR SINE MIR 28 144 -118 521 267 33 7 chr17 81901986 81902136 -7602417 + MIR3 SINE MIR 33 186 -22 22 0 0 0 chr17 81902718 81902740 -7601813 + GC_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 81902757 81902788 -7601765 + GC_rich Low_complexity Low_complexity 1 31 0 2353 70 3 3 chr17 81903211 81903511 -7601042 + AluSp SINE Alu 1 300 -13 729 175 27 76 chr17 81903976 81904031 -7600522 + L1M4 LINE L1 5031 5087 -1059 2216 102 0 7 chr17 81904031 81904336 -7600217 - AluSq SINE Alu -10 303 1 1863 111 39 0 chr17 81904339 81904645 -7599908 - AluSx SINE Alu 0 312 3 729 175 27 76 chr17 81904645 81904741 -7599812 + L1M4 LINE L1 5089 5174 -972 1529 163 116 70 chr17 81904741 81905171 -7599382 - LTR7 LTR ERV1 0 450 1 729 175 27 76 chr17 81905171 81905237 -7599316 + L1M4 LINE L1 5174 5242 -904 569 209 9 26 chr17 81905250 81905365 -7599188 + AluJb SINE Alu 74 186 -126 403 150 22 20 chr17 81905386 81905472 -7599081 + L1MB8 LINE L1 5317 5401 -783 1854 149 3 20 chr17 81905472 81905773 -7598780 + AluSx SINE Alu 2 297 -15 403 150 22 20 chr17 81905773 81905849 -7598704 + L1MB8 LINE L1 5401 5855 -329 1387 69 0 0 chr17 81905859 81906033 -7598520 + AluY SINE Alu 127 300 -11 1178 182 112 7 chr17 81906033 81906329 -7598224 + L1MB8 LINE L1 5852 6178 0 1533 161 11 11 chr17 81906339 81906470 -7598083 + AluJo SINE Alu 3 133 -179 2249 101 0 3 chr17 81906470 81906776 -7597777 + AluSx SINE Alu 1 305 -7 1533 161 11 11 chr17 81906776 81906905 -7597648 + AluJo SINE Alu 132 263 -49 570 313 54 18 chr17 81907120 81907344 -7597209 + MIR SINE MIR 31 262 0 2188 104 3 3 chr17 81907591 81907889 -7596664 - AluSx SINE Alu -14 298 1 2080 131 3 10 chr17 81907938 81908251 -7596302 - AluSx SINE Alu -1 311 1 893 200 0 0 chr17 81908822 81908992 -7595561 + FRAM SINE Alu 1 170 -6 2120 118 0 3 chr17 81909392 81909688 -7594865 - AluSx SINE Alu -15 297 3 1957 56 4 22 chr17 81909805 81910075 -7594478 - AluY SINE Alu -46 265 1 290 234 16 0 chr17 81910076 81910140 -7594413 + MLT1C LTR MaLR 403 467 0 2079 123 10 3 chr17 81910235 81910545 -7594008 + AluSp SINE Alu 1 312 -1 1979 102 4 0 chr17 81910624 81910889 -7593664 + AluSx SINE Alu 3 268 -44 1894 106 62 4 chr17 81910946 81911220 -7593333 + AluSq SINE Alu 2 291 -22 1014 129 6 6 chr17 81911543 81911706 -7592847 + AluY SINE Alu 134 296 -15 291 175 4 0 chr17 81912264 81912326 -7592227 + Alu SINE Alu 237 282 -20 228 100 0 0 chr17 81912351 81912391 -7592162 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 1102 47 0 0 chr17 81912393 81912521 -7592032 + AluSg SINE Alu 1 128 -182 2199 120 0 0 chr17 81912570 81912869 -7591684 + AluSg SINE Alu 4 302 -8 307 85 0 0 chr17 81912950 81912997 -7591556 - L1PB4 LINE L1 -182 5974 5928 342 216 40 0 chr17 81913095 81913169 -7591384 + FRAM/FAM SINE Alu 3 79 -87 308 322 130 54 chr17 81913267 81913506 -7591047 + L1M4 LINE L1 3025 3281 -2865 405 293 218 7 chr17 81914544 81914691 -7589862 - MER91A DNA MER1_type -1 195 18 319 281 74 41 chr17 81914724 81914845 -7589708 - L2 LINE L2 -1 3271 3147 544 290 35 0 chr17 81919140 81919285 -7585268 + MIR SINE MIR 74 223 -39 1001 140 6 30 chr17 81919944 81920108 -7584445 - FRAM SINE Alu -17 159 1 684 246 174 22 chr17 81920832 81920960 -7583593 + Cheshire DNA MER1_type 201 308 -2112 2360 65 7 0 chr17 81920960 81921254 -7583299 - AluY SINE Alu -15 296 1 684 246 174 22 chr17 81921254 81921401 -7583152 + Cheshire DNA MER1_type 308 518 -1902 819 206 12 42 chr17 81921424 81921589 -7582964 + FRAM SINE Alu 2 161 -15 2071 106 31 0 chr17 81921602 81921894 -7582659 - AluSg SINE Alu -9 301 1 1881 142 10 3 chr17 81921904 81922199 -7582354 - AluSx SINE Alu -15 297 1 313 183 122 0 chr17 81922207 81922289 -7582264 - Cheshire DNA MER1_type -1782 638 547 1491 146 60 50 chr17 81922298 81922599 -7581954 - AluJo SINE Alu 0 312 9 1153 201 0 59 chr17 81922608 81922896 -7581657 + Cheshire DNA MER1_type 655 925 -1495 1273 150 0 15 chr17 81922896 81923096 -7581457 + AluSc SINE Alu 1 197 -112 584 57 0 0 chr17 81923096 81923166 -7581387 + AluSc SINE Alu 65 134 -175 1903 103 10 24 chr17 81923168 81923459 -7581094 + AluSc SINE Alu 1 287 -22 3563 184 90 21 chr17 81923501 81924227 -7580326 + Cheshire DNA MER1_type 1094 1769 -651 2066 128 0 3 chr17 81924227 81924524 -7580029 + AluSx SINE Alu 5 300 -12 3563 184 90 21 chr17 81924524 81924607 -7579946 + Cheshire DNA MER1_type 1769 1845 -575 2172 88 0 10 chr17 81924607 81924902 -7579651 + AluSx SINE Alu 1 292 -20 3563 184 90 21 chr17 81924902 81924962 -7579591 + Cheshire DNA MER1_type 1845 2024 -396 2272 53 46 0 chr17 81924963 81925247 -7579306 + AluY SINE Alu 1 297 -14 1415 109 57 0 chr17 81925260 81925470 -7579083 + AluJb SINE Alu 87 308 -4 549 110 0 11 chr17 81925473 81925564 -7578989 + Cheshire DNA MER1_type 2017 2106 -314 1778 161 3 13 chr17 81925564 81925862 -7578691 + AluJo SINE Alu 1 295 -17 2189 62 23 32 chr17 81926043 81926351 -7578202 - AluY SINE Alu -6 305 1 564 280 96 46 chr17 81928306 81928545 -7576008 - MIR SINE MIR 0 262 12 2316 87 0 3 chr17 81929156 81929466 -7575087 - AluSg SINE Alu -1 309 1 2159 107 3 7 chr17 81929884 81930182 -7574371 + AluSq SINE Alu 1 297 -16 2065 90 7 33 chr17 81930471 81930771 -7573782 + AluSg SINE Alu 1 292 -18 2173 92 7 3 chr17 81930788 81931083 -7573470 + AluSg SINE Alu 1 296 -14 1059 201 0 0 chr17 81931535 81931704 -7572849 + FAM SINE Alu 1 169 -6 1929 110 11 14 chr17 81931733 81932047 -7572506 - AluSc SINE Alu 0 313 1 944 120 0 0 chr17 81932050 81932183 -7572370 - AluSq/x SINE Alu -180 133 1 356 225 25 33 chr17 81932186 81932306 -7572247 + MER53 DNA DNA 64 182 -7 2390 65 7 0 chr17 81932950 81933256 -7571297 + AluY SINE Alu 1 308 -3 977 117 0 14 chr17 81933421 81933566 -7570987 - FLAM_C SINE Alu 0 143 1 2202 95 0 7 chr17 81933577 81933883 -7570670 - AluSq SINE Alu -9 304 1 1794 157 7 3 chr17 81934714 81935001 -7569552 + AluJb SINE Alu 6 293 -19 225 163 0 0 chr17 81935157 81935200 -7569353 + Alu SINE Alu 1 43 -258 363 212 0 0 chr17 81936319 81936385 -7568168 + L2 LINE L2 3246 3311 -2 2185 87 0 17 chr17 81936894 81937192 -7567361 + AluSx SINE Alu 1 293 -19 1804 154 3 44 chr17 81938080 81938226 -7566327 + AluJb SINE Alu 1 151 -161 2383 55 7 0 chr17 81938226 81938519 -7566034 + AluY SINE Alu 1 295 -16 2185 99 3 10 chr17 81938521 81938825 -7565728 + AluSg SINE Alu 1 302 -8 1804 154 3 44 chr17 81938825 81938993 -7565560 + AluJb SINE Alu 152 305 -7 2289 63 0 0 chr17 81938999 81939327 -7565226 + AluY SINE Alu 1 328 0 195 331 110 24 chr17 81939389 81939516 -7565037 - MIR SINE MIR -114 148 11 348 211 15 8 chr17 81939541 81939674 -7564879 + (TG)n Simple_repeat Simple_repeat 2 135 0 220 189 11 133 chr17 81939909 81939999 -7564554 - MIR SINE MIR -48 160 81 1941 121 66 3 chr17 81940062 81940351 -7564202 + AluSx SINE Alu 1 307 -5 1739 165 10 16 chr17 81940352 81940483 -7564070 + AluSx SINE Alu 3 133 -179 2109 76 3 88 chr17 81940483 81940825 -7563728 + AluSp SINE Alu 1 313 0 1739 165 10 16 chr17 81940825 81941002 -7563551 + AluSx SINE Alu 133 309 -3 288 186 0 17 chr17 81941109 81941168 -7563385 - MER69 DNA AcHobo 0 2526 2469 510 134 144 10 chr17 81941170 81941267 -7563286 - FRAM SINE Alu -9 167 58 2244 94 0 3 chr17 81941298 81941597 -7562956 + AluSq SINE Alu 1 298 -15 548 273 13 0 chr17 81941637 81941791 -7562762 - MER69 DNA AcHobo -1002 224 69 1836 156 3 3 chr17 81942098 81942406 -7562147 - AluSx SINE Alu -1 311 4 908 110 0 22 chr17 81942534 81942670 -7561883 + FLAM_C SINE Alu 11 143 0 333 83 0 0 chr17 81942736 81942784 -7561769 + AluJo/FLAM SINE Alu 63 110 -192 1244 202 32 24 chr17 81942785 81943037 -7561516 - AluJb SINE Alu -38 274 21 2279 65 0 26 chr17 81943134 81943440 -7561113 + AluY SINE Alu 1 298 -13 2112 76 28 0 chr17 81943450 81943738 -7560815 + AluSq SINE Alu 1 296 -17 1574 127 8 12 chr17 81943761 81944014 -7560539 + AluSx SINE Alu 55 306 -6 606 227 216 37 chr17 81944030 81944341 -7560212 - LTR50 LTR ERVL -323 472 80 1980 136 0 22 chr17 81944341 81944658 -7559895 + AluSx SINE Alu 3 312 0 606 227 216 37 chr17 81944658 81944711 -7559842 - LTR50 LTR ERVL -715 80 40 501 227 17 62 chr17 81944711 81944972 -7559581 + MLT1B LTR MaLR 1 248 -219 234 0 0 0 chr17 81946086 81946112 -7558441 + (CGGGGG)n Simple_repeat Simple_repeat 5 30 0 426 131 37 75 chr17 81947558 81947665 -7556888 - AluJo/FRAM SINE Alu 0 312 210 1909 120 4 0 chr17 81947667 81947934 -7556619 - AluSx SINE Alu -44 268 1 1876 91 13 58 chr17 81947942 81948251 -7556302 - AluSx SINE Alu -17 295 1 684 138 15 77 chr17 81948271 81948401 -7556152 - AluJb SINE Alu -190 122 1 2289 91 3 0 chr17 81948704 81949028 -7555525 + AluSc SINE Alu 1 325 0 2013 108 39 20 chr17 81951216 81951521 -7553032 + AluSx SINE Alu 1 311 -1 225 306 0 0 chr17 81952558 81952620 -7551933 - MER117 DNA MER1_type -37 160 99 1316 114 0 10 chr17 81952719 81952912 -7551641 + AluSg/x SINE Alu 120 310 0 705 194 89 13 chr17 81952933 81953159 -7551394 - MER33 DNA MER1_type -88 236 1 564 306 91 16 chr17 81953394 81953636 -7550917 + MIR SINE MIR 1 260 -2 2249 96 0 6 chr17 81955320 81955632 -7548921 + AluSg SINE Alu 1 310 0 836 104 0 0 chr17 81955655 81955770 -7548783 + AluSg/x SINE Alu 182 296 -16 1563 178 4 4 chr17 81955830 81956106 -7548447 + AluJo SINE Alu 23 298 -14 2193 115 0 28 chr17 81956108 81956429 -7548124 + AluSx SINE Alu 1 312 0 207 0 0 0 chr17 81957739 81957762 -7546791 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 481 169 54 42 chr17 81958145 81958311 -7546242 + L1MB7 LINE L1 6017 6184 0 2327 80 0 3 chr17 81959814 81960113 -7544440 + AluSq SINE Alu 1 298 -15 1101 187 61 22 chr17 81960123 81960353 -7544200 + MIR SINE MIR 1 239 -23 2106 111 0 3 chr17 81960779 81961098 -7543455 - AluSx SINE Alu 0 318 1 1570 168 34 34 chr17 81961778 81962076 -7542477 - AluJo SINE Alu -14 298 1 2105 136 3 0 chr17 81962683 81962992 -7541561 - AluSx SINE Alu -2 310 1 2320 79 10 7 chr17 81963522 81963826 -7540727 - AluSx SINE Alu -7 305 1 349 153 0 0 chr17 81963826 81963885 -7540668 - AluSq/x SINE Alu -166 136 78 1275 179 0 28 chr17 81963885 81964103 -7540450 - AluSx SINE Alu -100 212 1 1664 163 21 24 chr17 81964181 81964243 -7540310 + AluJb SINE Alu 1 62 -250 2341 70 3 3 chr17 81964243 81964543 -7540010 + AluY SINE Alu 2 301 -10 1664 163 21 24 chr17 81964543 81964769 -7539784 + AluJb SINE Alu 62 288 -24 186 291 13 89 chr17 81965062 81965141 -7539412 - L2 LINE L2 -24 3289 3217 743 131 88 0 chr17 81965303 81965440 -7539113 + BC200 scRNA scRNA 7 155 -45 530 196 171 6 chr17 81965453 81965526 -7539027 + MER58 DNA MER1_type 1 61 -280 1895 148 3 7 chr17 81965526 81965823 -7538730 - AluJb SINE Alu -12 300 5 530 196 171 6 chr17 81965823 81965907 -7538646 + MER58 DNA MER1_type 61 184 -157 1986 144 3 0 chr17 81965913 81966219 -7538334 + AluSg1 SINE Alu 1 307 -2 21 57 0 0 chr17 81967202 81967237 -7537316 + GC_rich Low_complexity Low_complexity 1 35 0 2189 90 10 3 chr17 81967609 81967909 -7536644 - AluSq SINE Alu -11 302 1 247 232 89 0 chr17 81968038 81968148 -7536405 + L1ME2 LINE L1 6055 6183 -1 558 152 65 0 chr17 81968164 81968302 -7536251 + L1MC3 LINE L1 6944 7090 -695 2319 93 0 0 chr17 81968303 81968604 -7535949 - AluSq SINE Alu -10 303 3 448 219 0 9 chr17 81968604 81968709 -7535844 - Charlie4 DNA MER1_type -1765 196 93 * 1217 216 36 41 chr17 81968706 81968888 -7535665 - MLT1C LTR MaLR -104 363 182 764 125 92 0 chr17 81968888 81969008 -7535545 - FLAM_C SINE Alu 0 133 3 1217 216 36 41 chr17 81969008 81969190 -7535363 - MLT1C LTR MaLR -285 182 1 1981 96 53 20 chr17 81969517 81969818 -7534735 + AluSx SINE Alu 2 312 0 1548 200 72 14 chr17 81969889 81970234 -7534319 - MLT1A1 LTR MaLR 0 365 1 267 316 0 32 chr17 81970301 81970396 -7534157 - L2 LINE L2 -238 3034 2943 2239 97 0 3 chr17 81970760 81971060 -7533493 - AluSx SINE Alu -13 299 1 185 363 69 10 chr17 81971212 81971314 -7533239 - MIR3 SINE MIR -53 155 48 805 158 31 0 chr17 81971417 81971544 -7533009 + FLAM_C SINE Alu 1 131 -2 1929 153 3 0 chr17 81971660 81971968 -7532585 - AluSx SINE Alu -3 309 1 2489 50 0 0 chr17 81972078 81972379 -7532174 - AluY SINE Alu -10 301 1 426 297 74 69 chr17 81972404 81972451 -7532102 - HAL1 LINE L1 0 2507 2462 1519 146 12 4 chr17 81972451 81972716 -7531837 + AluSx SINE Alu 44 310 0 426 297 74 69 chr17 81972716 81972728 -7531825 - HAL1 LINE L1 -45 2462 2452 2337 80 0 3 chr17 81972728 81973030 -7531523 + AluSp SINE Alu 1 301 -12 426 297 74 69 chr17 81973030 81973143 -7531410 - HAL1 LINE L1 -55 2452 2332 1923 123 0 39 chr17 81973170 81973479 -7531074 - AluJb SINE Alu -11 301 5 2184 89 31 0 chr17 81973487 81973778 -7530775 - AluSg SINE Alu -10 300 1 1224 199 164 0 chr17 81973841 81974097 -7530456 - AluJb SINE Alu -4 298 1 763 280 88 24 chr17 81974139 81974435 -7530118 - HAL1 LINE L1 -716 1791 1477 2675 95 3 42 chr17 81974483 81974793 -7529760 + THE1B LTR MaLR 1 295 -69 2555 58 0 0 chr17 81974793 81975102 -7529451 + AluY SINE Alu 1 309 -2 2675 95 3 42 chr17 81975102 81975170 -7529383 + THE1B LTR MaLR 295 364 0 1297 149 43 43 chr17 81975482 81975737 -7528816 + AluJb SINE Alu 58 312 0 1268 124 0 10 chr17 81975740 81975755 -7528798 + AluY SINE Alu 119 133 -178 1802 132 7 27 chr17 81975755 81976050 -7528503 + AluSq SINE Alu 9 297 -16 1268 124 0 10 chr17 81976050 81976227 -7528326 + AluY SINE Alu 133 309 -2 2238 103 3 19 chr17 81976292 81976426 -7528127 + AluSg SINE Alu 1 136 -174 2282 74 0 3 chr17 81976426 81976755 -7527798 + AluY SINE Alu 2 329 0 2238 103 3 19 chr17 81976755 81976930 -7527623 + AluSg SINE Alu 136 306 -4 24 53 0 0 chr17 81977451 81977489 -7527064 + AT_rich Low_complexity Low_complexity 1 38 0 2336 74 3 0 chr17 81977609 81977905 -7526648 - AluSg SINE Alu -13 297 1 751 149 179 0 chr17 81978354 81978488 -7526065 + FRAM SINE Alu 1 154 -22 877 167 0 0 chr17 81978641 81978779 -7525774 + FRAM SINE Alu 22 159 -17 257 357 42 14 chr17 81979952 81980095 -7524458 - MIR SINE MIR -12 250 104 303 287 0 11 chr17 81980252 81980346 -7524207 + (CA)n Simple_repeat Simple_repeat 1 93 0 292 328 58 26 chr17 81981608 81981788 -7522765 + MIR3 SINE MIR 4 140 -68 339 239 54 0 chr17 81982130 81982222 -7522331 - MIR SINE MIR -79 183 87 1744 75 0 0 chr17 81983146 81983373 -7521180 - AluY SINE Alu -82 229 3 275 333 146 27 chr17 81984072 81984368 -7520185 + L2 LINE L2 2906 3238 -75 2491 50 0 0 chr17 81984595 81984896 -7519657 - AluY SINE Alu -9 302 2 1288 111 0 0 chr17 81985008 81985180 -7519373 - AluSq SINE Alu -138 175 4 309 241 0 0 chr17 81985180 81985238 -7519315 - L1M4 LINE L1 -1010 5136 5079 1360 167 0 13 chr17 81985271 81985499 -7519054 - AluJb SINE Alu -87 225 1 361 277 112 2 chr17 81985550 81985701 -7518852 - L1M4 LINE L1 -1053 5093 4929 1946 144 0 10 chr17 81985702 81986000 -7518553 + AluJb SINE Alu 1 295 -17 1188 186 95 24 chr17 81986004 81986256 -7518297 + AluJo SINE Alu 1 270 -42 324 221 78 0 chr17 81986259 81986336 -7518217 - L1M4 LINE L1 -1213 4933 4851 1660 102 0 17 chr17 81986338 81986574 -7517979 + AluSc SINE Alu 1 232 -77 2167 115 7 0 chr17 81986703 81987008 -7517545 + AluSx SINE Alu 1 307 -5 452 225 9 9 chr17 81987906 81988017 -7516536 - MER104 DNA Tc2 -10 170 60 498 153 0 48 chr17 81988019 81988143 -7516410 + CT-rich Low_complexity Low_complexity 4 121 0 549 123 0 0 chr17 81988180 81988253 -7516300 - AluSq SINE Alu -154 159 87 2139 71 0 44 chr17 81988356 81988653 -7515900 + AluY SINE Alu 23 306 -5 2156 91 3 7 chr17 81988675 81988972 -7515581 + AluSg SINE Alu 1 296 -14 453 331 30 0 chr17 81988974 81989143 -7515410 + L1ME4a LINE L1 5764 5937 -184 2085 147 0 3 chr17 81989154 81989467 -7515086 - AluJb SINE Alu 0 312 1 1597 99 0 0 chr17 81989486 81989697 -7514856 - AluSq SINE Alu -11 302 92 313 173 0 67 chr17 81989797 81989828 -7514725 + L1MC4 LINE L1 7506 7538 -504 3632 116 84 34 chr17 81989828 81990234 -7514319 - MER39B LTR ERV1 0 653 204 2116 100 7 3 chr17 81990234 81990533 -7514020 - AluY SINE Alu -11 300 1 3632 116 84 34 chr17 81990533 81990748 -7513805 - MER39B LTR ERV1 -449 204 1 313 173 0 67 chr17 81990748 81990791 -7513762 + L1MC4 LINE L1 7538 7575 -467 2012 144 0 0 chr17 81990794 81991092 -7513461 + AluSx SINE Alu 1 298 -14 282 153 0 0 chr17 81991113 81991172 -7513381 + L1MC4 LINE L1 7984 8042 0 302 277 128 0 chr17 81991299 81991393 -7513160 - L2 LINE L2 0 3272 3167 413 117 0 0 chr17 81991558 81991618 -7512935 + AluS SINE Alu 1 60 -258 294 75 0 0 chr17 81991718 81991758 -7512795 - Alu SINE Alu -258 41 2 2343 61 10 13 chr17 81991887 81992197 -7512356 - AluSc SINE Alu 0 309 1 243 292 25 33 chr17 81992197 81992317 -7512236 - L1MC4a LINE L1 -403 7405 7287 433 315 28 33 chr17 81992359 81992509 -7512044 - L1MC4a LINE L1 -635 7173 7023 2414 60 7 3 chr17 81992509 81992810 -7511743 + AluSc SINE Alu 1 302 -7 433 315 28 33 chr17 81992810 81992840 -7511713 - L1MC4a LINE L1 -785 7023 6994 438 137 14 0 chr17 81992879 81992952 -7511601 + AluS SINE Alu 227 300 -10 817 116 8 8 chr17 81992980 81993109 -7511444 + AluSc SINE Alu 167 295 -14 2469 42 0 0 chr17 81993109 81993397 -7511156 + AluY SINE Alu 10 297 -14 1393 195 94 0 chr17 81993407 81993684 -7510869 + AluJb SINE Alu 1 303 -9 231 289 67 0 chr17 81993960 81994050 -7510503 - MIR SINE MIR -61 147 52 1019 184 0 53 chr17 81994059 81994115 -7510438 + L1PB4 LINE L1 5928 5985 -171 2180 102 16 0 chr17 81994115 81994420 -7510133 + AluSx SINE Alu 1 310 -2 1019 184 0 53 chr17 81994420 81994591 -7509962 + L1PB4 LINE L1 5985 6143 -13 2103 100 7 0 chr17 81994685 81994976 -7509577 + AluSc SINE Alu 1 293 -16 389 257 10 0 chr17 81995057 81995158 -7509395 + L1MD2 LINE L1 6242 6343 -16 2202 101 20 0 chr17 81995167 81995465 -7509088 + AluSq SINE Alu 1 304 -9 486 328 103 44 chr17 81996017 81996323 -7508230 + L1M4 LINE L1 4006 4343 -1803 2382 62 0 7 chr17 81996323 81996632 -7507921 + AluY SINE Alu 4 310 -1 486 328 103 44 chr17 81996632 81996731 -7507822 + L1M4 LINE L1 4343 4435 -1711 1141 174 0 34 chr17 81996898 81997114 -7507439 + AluJo SINE Alu 84 293 -19 2253 113 0 0 chr17 81997114 81997423 -7507130 + AluSx SINE Alu 2 310 -2 1141 174 0 34 chr17 81997423 81997442 -7507111 + AluJo SINE Alu 293 311 -1 2271 116 0 0 chr17 81997442 81997752 -7506801 + AluSg SINE Alu 1 310 0 21 0 0 0 chr17 81997752 81997773 -7506780 + AT_rich Low_complexity Low_complexity 1 21 0 1512 87 14 10 chr17 81997787 81997994 -7506559 + AluSg SINE Alu 1 208 -102 952 126 0 0 chr17 81998094 81998229 -7506324 - AluJo SINE Alu -171 141 7 1824 111 0 0 chr17 81998354 81998606 -7505947 + AluSx SINE Alu 47 298 -14 1668 134 81 11 chr17 81998856 81999140 -7505413 + AluSx SINE Alu 6 309 -3 2166 97 10 3 chr17 81999147 81999445 -7505108 + AluSx SINE Alu 1 300 -12 1821 132 6 52 chr17 82000518 82000792 -7503761 - AluJb SINE Alu 0 356 100 2206 112 3 0 chr17 82000792 82001095 -7503458 - AluSq SINE Alu -9 304 1 1821 132 6 52 chr17 82001095 82001191 -7503362 - AluJb SINE Alu -256 100 1 1703 158 28 0 chr17 82001191 82001482 -7503071 - AluJo SINE Alu -13 299 1 854 160 0 0 chr17 82001921 82002052 -7502501 - FLAM_C SINE Alu 0 133 3 1864 175 3 0 chr17 82002054 82002357 -7502196 - AluJo SINE Alu -6 306 3 2008 87 23 0 chr17 82002523 82002789 -7501764 + AluSq SINE Alu 1 272 -41 2203 94 7 3 chr17 82002890 82003188 -7501365 - AluSg SINE Alu -11 299 1 467 191 19 0 chr17 82003189 82003294 -7501259 - MER33 DNA MER1_type -184 140 34 2352 75 0 3 chr17 82003901 82004206 -7500347 + AluSx SINE Alu 4 307 -5 2317 91 0 0 chr17 82005150 82005448 -7499105 + AluSx SINE Alu 1 298 -14 1204 177 133 30 chr17 82006774 82007045 -7497508 + AluSg SINE Alu 1 299 -11 1942 130 0 14 chr17 82007046 82007339 -7497214 + AluJb SINE Alu 3 291 -21 509 283 51 0 chr17 82007879 82008017 -7496536 - L2 LINE L2 0 3313 3169 * 746 275 40 32 chr17 82008004 82008255 -7496298 - MIR SINE MIR -1 261 9 181 325 150 19 chr17 82008452 82008612 -7495941 + MIR3 SINE MIR 4 184 -24 289 273 80 43 chr17 82010140 82010327 -7494226 - L2 LINE L2 -217 3055 2862 228 301 0 0 chr17 82011621 82011694 -7492859 + G-rich Low_complexity Low_complexity 1 73 0 213 195 0 0 chr17 82011838 82011879 -7492674 + (CGG)n Simple_repeat Simple_repeat 2 42 0 2297 84 0 0 chr17 82011935 82012232 -7492321 + AluSx SINE Alu 1 297 -15 485 213 47 27 chr17 82012283 82012433 -7492120 + MER106A DNA MER1_type 5 157 -79 836 136 0 23 chr17 82012434 82012566 -7491987 + FLAM_C SINE Alu 1 129 -14 281 173 0 115 chr17 82012590 82012694 -7491859 + MER106A DNA MER1_type 145 236 0 341 275 22 28 chr17 82013080 82013258 -7491295 + (TTTAG)n Simple_repeat Simple_repeat 1 177 0 * 436 283 11 17 chr17 82013154 82013331 -7491222 + (GTTTG)n Simple_repeat Simple_repeat 2 177 0 287 257 28 34 chr17 82013274 82013544 -7491009 + (TTTAG)n Simple_repeat Simple_repeat 1 268 0 * 240 337 23 0 chr17 82013927 82014013 -7490540 + MIR3 SINE MIR 96 183 -25 384 301 44 22 chr17 82015660 82015796 -7488757 + MIR SINE MIR 15 153 -109 2206 121 0 0 chr17 82016064 82016362 -7488191 - AluSx SINE Alu -14 298 1 1746 148 27 34 chr17 82016364 82016661 -7487892 - AluJb SINE Alu -17 295 1 787 182 0 8 chr17 82016664 82016796 -7487757 - AluJb SINE Alu -17 295 165 2100 126 0 7 chr17 82017121 82017431 -7487122 - AluSx SINE Alu -4 308 1 352 248 83 23 chr17 82017443 82017576 -7486977 - MIR SINE MIR -120 142 2 532 238 25 0 chr17 82018414 82018536 -7486017 + MIR SINE MIR 51 175 -87 204 283 67 0 chr17 82019108 82019168 -7485385 - L2 LINE L2 -17 3296 3233 373 377 81 8 chr17 82019482 82020010 -7484543 - L2 LINE L2 -608 2706 2140 558 219 73 18 chr17 82020010 82020174 -7484379 + MER5B DNA MER1_type 1 173 -5 244 297 47 88 chr17 82020190 82020249 -7484304 - MER5A DNA MER1_type -3 186 126 2499 68 0 0 chr17 82020249 82020560 -7483993 + AluY SINE Alu 1 311 0 244 297 47 88 chr17 82020560 82020692 -7483861 - MER5A DNA MER1_type -63 126 3 2034 98 42 0 chr17 82020705 82020991 -7483562 + AluSx SINE Alu 11 308 -4 2296 101 0 3 chr17 82022206 82022514 -7482039 - AluSx SINE Alu -5 307 1 1972 110 3 45 chr17 82026666 82026976 -7477577 + AluSg SINE Alu 1 297 -13 1215 121 0 0 chr17 82026979 82027145 -7477408 + AluSg/x SINE Alu 138 303 -7 924 114 0 23 chr17 82028634 82028766 -7475787 + AluJo/FLAM SINE Alu 1 129 -173 1939 162 0 7 chr17 82028768 82029077 -7475476 + AluJb SINE Alu 1 307 -5 2221 88 16 20 chr17 82029253 82029558 -7474995 + AluSq SINE Alu 1 304 -9 1818 138 8 0 chr17 82030301 82030569 -7473984 - AluJo SINE Alu -30 282 13 201 39 0 0 chr17 82031961 82031987 -7472566 + (CAGCC)n Simple_repeat Simple_repeat 3 28 0 2212 105 0 0 chr17 82033667 82033953 -7470600 + AluSx SINE Alu 13 298 -14 1573 158 81 11 chr17 82034203 82034487 -7470066 + AluSx SINE Alu 6 309 -3 2237 98 3 0 chr17 82034607 82034893 -7469660 - AluSx SINE Alu -25 287 1 2008 230 24 11 chr17 82034926 82035391 -7469162 + MLT1F LTR MaLR 12 482 -60 892 135 15 0 chr17 82035404 82035537 -7469016 + AluJo SINE Alu 1 135 -177 424 221 148 7 chr17 82035635 82035784 -7468769 + L1ME4a LINE L1 5936 6105 -16 2361 97 3 0 chr17 82035807 82036107 -7468446 - AluSp SINE Alu -11 302 2 44 62 0 10 chr17 82036462 82036488 -7468065 + AT_rich Low_complexity Low_complexity 1 26 -70 1251 21 0 0 chr17 82036488 82036631 -7467922 + L1PA5 LINE L1 6005 6147 -7 44 62 0 10 chr17 82036631 82036701 -7467852 + AT_rich Low_complexity Low_complexity 26 96 0 2403 99 3 0 chr17 82036704 82037016 -7467537 + AluSp SINE Alu 1 313 0 254 173 0 200 chr17 82037024 82037080 -7467473 + AluSg/x SINE Alu 80 105 -195 1687 187 7 7 chr17 82037080 82037385 -7467168 + AluJo SINE Alu 1 305 -7 254 173 0 200 chr17 82037385 82037438 -7467115 + AluSg/x SINE Alu 105 167 -133 989 104 0 0 chr17 82037441 82037566 -7466987 - AluSq/x SINE Alu -188 125 1 1902 205 8 22 chr17 82037586 82037848 -7466705 + MER21-int LTR ERV1 2818 3073 -1118 1803 148 64 17 chr17 82037848 82038145 -7466408 + AluJb SINE Alu 1 311 -1 1902 205 8 22 chr17 82038145 82038282 -7466271 + MER21-int LTR ERV1 3073 3211 -980 3860 146 47 21 chr17 82038288 82038989 -7465564 + LTR8A LTR ERV1 9 727 0 1122 162 53 18 chr17 82038989 82039217 -7465336 + MER21-int LTR ERV1 3206 3441 -750 1920 77 0 0 chr17 82039221 82039480 -7465073 - AluSx SINE Alu 0 308 50 1874 131 0 7 chr17 82039580 82039855 -7464698 - AluJb SINE Alu -39 273 1 25 0 0 0 chr17 82040685 82040710 -7463843 + GC_rich Low_complexity Low_complexity 1 25 0 2432 46 3 0 chr17 82041517 82041827 -7462726 + AluY SINE Alu 1 311 0 1950 80 4 0 chr17 82042319 82042570 -7461983 - AluSg SINE Alu -5 305 54 2507 49 0 55 chr17 82042691 82043018 -7461535 - AluY SINE Alu -2 309 1 2256 97 6 22 chr17 82045100 82045411 -7459142 - AluSq SINE Alu -7 306 1 2227 66 38 3 chr17 82045424 82045713 -7458840 - AluY SINE Alu -12 299 1 216 200 22 0 chr17 82045752 82045797 -7458756 + (TG)n Simple_repeat Simple_repeat 2 47 0 2250 114 0 0 chr17 82046010 82046309 -7458244 - AluSx SINE Alu -13 299 1 2475 67 3 0 chr17 82046460 82046759 -7457794 - AluSp SINE Alu -13 300 1 542 139 35 0 chr17 82047901 82047987 -7456566 - AluSx SINE Alu -94 216 128 2298 88 34 0 chr17 82048001 82048296 -7456257 - AluSx SINE Alu -7 305 1 1102 98 0 0 chr17 82048313 82048446 -7456107 - AluSx SINE Alu -180 133 1 2252 139 0 0 chr17 82048463 82048773 -7455780 - AluSx SINE Alu -2 310 1 2093 143 0 3 chr17 82048775 82049082 -7455471 - AluSx SINE Alu 0 312 7 2621 65 0 0 chr17 82050949 82051257 -7453296 - AluY SINE Alu -3 308 1 1053 79 0 29 chr17 82051258 82051397 -7453156 - AluYa5 SINE Alu -176 135 1 2409 94 3 0 chr17 82051403 82051711 -7452842 - AluY SINE Alu -2 309 1 2140 86 0 7 chr17 82052544 82052813 -7451740 - AluSx SINE Alu -44 268 2 2416 87 3 0 chr17 82052814 82053112 -7451441 - AluSg SINE Alu -7 303 5 1087 182 11 0 chr17 82053191 82053378 -7451175 - MER5A DNA MER1_type 0 189 1 810 176 0 42 chr17 82054078 82054196 -7450357 + AluJb SINE Alu 1 114 -198 1730 105 0 4 chr17 82054196 82054424 -7450129 - AluSg/x SINE Alu -4 308 82 810 176 0 42 chr17 82054424 82054447 -7450106 + AluJb SINE Alu 114 136 -176 2097 129 17 0 chr17 82054459 82054754 -7449799 + AluSx SINE Alu 1 300 -12 1065 121 17 11 chr17 82055068 82055242 -7449311 + AluSg/x SINE Alu 132 306 -6 832 236 62 0 chr17 82055242 82055437 -7449116 + MIR SINE MIR 46 252 -10 2000 111 14 24 chr17 82056501 82056798 -7447755 + AluSq SINE Alu 1 294 -19 1997 120 0 54 chr17 82056798 82057115 -7447438 + AluSq SINE Alu 1 300 -13 2238 107 13 13 chr17 82057890 82058199 -7446354 + AluSx SINE Alu 1 309 -3 2332 99 17 0 chr17 82058200 82058502 -7446051 + AluSp SINE Alu 1 307 -6 1762 114 33 59 chr17 82059032 82059338 -7445215 + AluSq SINE Alu 1 298 -15 189 0 0 0 chr17 82059342 82059363 -7445190 + (CA)n Simple_repeat Simple_repeat 2 22 0 504 203 34 161 chr17 82059372 82059542 -7445011 - L1MC5 LINE L1 -58 7903 7770 2162 77 4 0 chr17 82059542 82059801 -7444752 + AluSp SINE Alu 40 299 -14 504 203 34 161 chr17 82059801 82059866 -7444687 - L1MC5 LINE L1 -191 7770 7698 1943 166 0 6 chr17 82059880 82060193 -7444360 + AluJb SINE Alu 1 311 -1 2258 87 0 20 chr17 82062005 82062303 -7442250 + AluSx SINE Alu 1 292 -20 1898 156 7 10 chr17 82062801 82063102 -7441451 - AluJb SINE Alu -12 300 1 1383 186 11 39 chr17 82063520 82063805 -7440748 - AluJo SINE Alu -35 277 1 1701 117 91 4 chr17 82063815 82064080 -7440473 - AluSg SINE Alu -11 299 12 2202 91 10 10 chr17 82064593 82064901 -7439652 - AluSg SINE Alu -2 308 1 1931 121 0 41 chr17 82066491 82066806 -7437747 + AluJo SINE Alu 1 302 -10 2352 84 10 0 chr17 82066806 82067103 -7437450 + AluSg SINE Alu 1 300 -10 859 159 0 0 chr17 82067352 82067478 -7437075 + FLAM_C SINE Alu 2 127 -6 2355 105 3 0 chr17 82067729 82068033 -7436520 - AluSx SINE Alu -7 305 1 2135 114 3 13 chr17 82068169 82068468 -7436085 - AluSx SINE Alu -16 296 1 2157 106 23 10 chr17 82068470 82068771 -7435782 - AluSx SINE Alu -7 305 1 2533 57 0 3 chr17 82069579 82069875 -7434678 + AluY SINE Alu 1 295 -16 1214 141 0 0 chr17 82070356 82070526 -7434027 - AluSg/x SINE Alu -11 299 130 2257 93 0 63 chr17 82070526 82070721 -7433832 - AluSx SINE Alu 0 312 145 2332 94 0 3 chr17 82070721 82071019 -7433534 - AluSx SINE Alu -15 297 1 2257 93 0 63 chr17 82071019 82071156 -7433397 - AluSx SINE Alu -167 145 1 645 152 29 19 chr17 82071472 82071577 -7432976 - FLAM_C SINE Alu -36 107 2 499 163 31 39 chr17 82071579 82071601 -7432952 - L1MB7 LINE L1 0 6184 6163 2078 100 0 14 chr17 82071601 82071882 -7432671 + AluSg SINE Alu 20 296 -14 499 163 31 39 chr17 82071882 82071988 -7432565 - L1MB7 LINE L1 -21 6163 6057 1126 88 14 7 chr17 82072088 82072236 -7432317 - AluSq/x SINE Alu -163 149 1 1291 138 62 69 chr17 82072289 82072565 -7431988 + AluJb SINE Alu 29 302 -10 2275 81 13 13 chr17 82072893 82073203 -7431350 - AluSq SINE Alu -2 311 2 3811 157 43 36 chr17 82074632 82074805 -7429748 - L1MB7 LINE L1 -118 6066 5896 2470 63 7 7 chr17 82074805 82075107 -7429446 - AluSp SINE Alu -11 302 1 3811 157 43 36 chr17 82075107 82075130 -7429423 - L1MB7 LINE L1 -288 5896 5875 2008 132 35 0 chr17 82075130 82075418 -7429135 - AluSx SINE Alu -13 299 2 3811 157 43 36 chr17 82075418 82076024 -7428529 - L1MB7 LINE L1 -309 5875 5257 1010 92 7 28 chr17 82076144 82076285 -7428268 - AluSq SINE Alu -43 270 133 207 114 0 0 chr17 82076355 82076390 -7428163 + (GGTTG)n Simple_repeat Simple_repeat 4 38 0 2238 89 34 0 chr17 82076804 82077096 -7427457 - AluSq SINE Alu -11 302 1 853 145 51 7 chr17 82077096 82077234 -7427319 - AluJb SINE Alu -168 144 1 1995 129 24 0 chr17 82077286 82077603 -7426950 - AluSx SINE Alu 0 324 1 392 326 52 0 chr17 82077638 82077773 -7426780 + MIR3 SINE MIR 19 160 -48 2432 86 3 13 chr17 82077885 82078200 -7426353 - AluSx SINE Alu 0 312 1 2061 91 0 100 chr17 82078584 82078756 -7425797 - AluSx SINE Alu -7 305 180 2189 116 7 0 chr17 82078756 82079059 -7425494 - AluSg SINE Alu -5 305 1 2061 91 0 100 chr17 82079059 82079215 -7425338 - AluSx SINE Alu -132 180 10 802 218 30 18 chr17 82080345 82080510 -7424043 - FRAM SINE Alu -8 168 2 949 142 0 20 chr17 82080563 82080711 -7423842 + FRAM SINE Alu 18 162 -14 426 156 0 0 chr17 82080715 82080779 -7423774 + AluS SINE Alu 6 69 -244 509 148 25 0 chr17 82080879 82080960 -7423593 - AluS SINE Alu -228 84 2 2117 127 3 19 chr17 82080993 82081309 -7423244 + AluSx SINE Alu 1 311 -1 2306 101 3 3 chr17 82081358 82081656 -7422897 + AluSx SINE Alu 1 298 -14 562 313 54 18 chr17 82081903 82082127 -7422426 - MIR SINE MIR 0 262 31 1221 189 11 62 chr17 82082342 82082485 -7422068 - AluJo SINE Alu -49 263 139 2277 102 0 3 chr17 82082485 82082780 -7421773 - AluSx SINE Alu -18 294 1 1221 189 11 62 chr17 82082780 82082911 -7421642 - AluJo SINE Alu -173 139 3 1254 182 112 7 chr17 82082921 82083217 -7421336 - L1MB8 LINE L1 0 6178 5852 1446 69 0 0 chr17 82083217 82083391 -7421162 - AluY SINE Alu -11 300 127 386 135 39 14 chr17 82083391 82083477 -7421076 - L1MB7 LINE L1 -314 5864 5778 2197 106 10 3 chr17 82083477 82083769 -7420784 - AluSc SINE Alu -15 294 1 438 266 66 74 chr17 82086325 82086569 -7417984 + MER112 DNA MER1_type 19 260 0 2056 124 3 7 chr17 82087219 82087518 -7417035 - AluSx SINE Alu -14 298 1 1725 157 17 10 chr17 82092240 82092539 -7412014 + AluJo SINE Alu 1 301 -11 739 123 9 9 chr17 82092539 82092647 -7411906 + FLAM_C SINE Alu 36 143 0 1835 97 30 8 chr17 82092655 82092922 -7411631 + AluSx SINE Alu 1 273 -39 523 202 91 0 chr17 82094183 82094282 -7410271 + FLAM_A SINE Alu 1 108 -34 1616 155 40 24 chr17 82094300 82094596 -7409957 + AluSx SINE Alu 2 302 -10 1736 176 10 3 chr17 82094971 82095260 -7409293 - AluJb SINE Alu -21 291 1 2230 102 3 0 chr17 82095266 82095571 -7408982 - AluSx SINE Alu -6 306 1 306 299 128 0 chr17 82095573 82095690 -7408863 - L1ME4a LINE L1 -56 6065 5934 289 308 182 6 chr17 82096709 82096868 -7407685 - MIR SINE MIR -40 222 36 2110 122 3 0 chr17 82097844 82098140 -7406413 + AluSx SINE Alu 1 297 -15 230 95 24 0 chr17 82098147 82098189 -7406364 + (CA)n Simple_repeat Simple_repeat 2 44 0 418 214 20 0 chr17 82098737 82098835 -7405718 - Tigger7 DNA MER2_type -3 2584 2485 1181 191 65 16 chr17 82098843 82099089 -7405464 - Tigger7 DNA MER2_type -2229 258 1 2174 100 3 0 chr17 82099170 82099461 -7405092 + AluSg SINE Alu 1 292 -18 741 175 0 0 chr17 82099621 82099735 -7404818 - FLAM_C SINE Alu -25 118 5 473 71 0 0 chr17 82099788 82099844 -7404709 - AluSc SINE Alu -137 172 117 2000 124 30 0 chr17 82099900 82100198 -7404355 + AluSq SINE Alu 1 307 -6 1550 146 0 66 chr17 82100199 82100486 -7404067 + AluJo SINE Alu 1 268 -44 790 182 8 0 chr17 82100620 82100752 -7403801 + FLAM_C SINE Alu 1 133 0 1714 172 10 7 chr17 82100756 82101052 -7403501 + AluJo SINE Alu 1 297 -15 29 0 0 0 chr17 82101058 82101087 -7403466 + AT_rich Low_complexity Low_complexity 1 29 0 233 79 79 13 chr17 82101128 82101204 -7403349 + (TA)n Simple_repeat Simple_repeat 2 82 0 2052 123 0 0 chr17 82101204 82101489 -7403064 - AluSx SINE Alu -27 285 1 246 286 16 0 chr17 82101515 82101578 -7402975 - L2 LINE L2 -45 3268 3205 258 136 0 0 chr17 82101638 82101682 -7402871 + L1MB3 LINE L1 5624 5667 -504 1889 127 16 16 chr17 82101682 82101990 -7402563 + AluSq SINE Alu 1 308 -5 1700 136 83 40 chr17 82101994 82102328 -7402225 + L1MB3 LINE L1 5782 6135 -48 2153 89 34 0 chr17 82102328 82102620 -7401933 + AluSc SINE Alu 1 302 -7 1700 136 83 40 chr17 82102620 82102660 -7401893 + L1MB3 LINE L1 6135 6172 -11 206 315 79 70 chr17 82102846 82103018 -7401535 - L2 LINE L2 -426 2888 2712 1887 141 0 36 chr17 82103018 82103322 -7401231 + AluSg SINE Alu 1 293 -17 206 315 79 70 chr17 82103322 82103390 -7401163 - L2 LINE L2 -602 2712 2646 2228 58 14 7 chr17 82104151 82104442 -7400111 + AluY SINE Alu 1 293 -18 231 133 0 0 chr17 82104525 82104570 -7399983 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1737 153 13 36 chr17 82104974 82105116 -7399437 + AluJb SINE Alu 1 145 -167 1800 138 47 10 chr17 82105116 82105412 -7399141 + AluJb SINE Alu 1 307 -5 1737 153 13 36 chr17 82105412 82105576 -7398977 + AluJb SINE Alu 145 300 -12 437 290 31 93 chr17 82105580 82105653 -7398900 - MIR SINE MIR 0 262 186 732 203 0 0 chr17 82105653 82105786 -7398767 - FLAM_C SINE Alu 0 133 1 437 290 31 93 chr17 82105786 82105971 -7398582 - MIR SINE MIR -76 186 20 325 174 47 35 chr17 82106971 82107057 -7397496 + HY3 scRNA scRNA 14 100 -1 419 305 84 30 chr17 82107261 82107428 -7397125 - MIR SINE MIR -84 178 3 181 318 70 65 chr17 82107866 82107920 -7396633 - L2 LINE L2 -565 2749 2697 2197 123 0 7 chr17 82107920 82108230 -7396323 + AluSx SINE Alu 1 308 -4 181 318 70 65 chr17 82108230 82108376 -7396177 - L2 LINE L2 -617 2697 2548 2365 96 0 3 chr17 82108752 82109064 -7395489 + AluSx SINE Alu 1 311 -1 2622 45 0 0 chr17 82109108 82109418 -7395135 + AluY SINE Alu 2 311 0 298 311 39 78 chr17 82112314 82112520 -7392033 + MIR SINE MIR 51 248 -14 231 88 0 0 chr17 82114825 82114859 -7389694 + (CACCC)n Simple_repeat Simple_repeat 5 38 0 1007 63 0 0 chr17 82117406 82117532 -7387021 + AluSc SINE Alu 171 296 -13 2261 97 0 3 chr17 82117540 82117840 -7386713 + AluSx SINE Alu 1 299 -13 2253 91 3 10 chr17 82117840 82118147 -7386406 + AluSg SINE Alu 1 305 -5 840 229 11 0 chr17 82119589 82119768 -7384785 + AluJo SINE Alu 120 300 -12 2220 109 3 13 chr17 82119845 82120157 -7384396 - AluSp SINE Alu -4 309 1 2209 87 7 0 chr17 82120158 82120457 -7384096 - AluY SINE Alu -10 301 1 2124 117 3 0 chr17 82120757 82121057 -7383496 + AluSx SINE Alu 1 301 -11 690 82 20 0 chr17 82121159 82121257 -7383296 - AluY SINE Alu -211 100 1 22 0 0 0 chr17 82121564 82121586 -7382967 + GC_rich Low_complexity Low_complexity 1 22 0 299 321 84 0 chr17 82122349 82122480 -7382073 + L2 LINE L2 3167 3308 -5 2474 42 3 10 chr17 82122522 82122828 -7381725 + AluSp SINE Alu 1 304 -9 216 0 0 0 chr17 82122867 82122891 -7381662 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 262 325 234 0 chr17 82122913 82123067 -7381486 + MIR SINE MIR 12 201 -61 2070 142 0 0 chr17 82123116 82123426 -7381127 - AluSx SINE Alu -2 310 1 2165 114 3 0 chr17 82125647 82125955 -7378598 + AluSx SINE Alu 1 309 -3 257 287 59 40 chr17 82129024 82129125 -7375428 + MIR3 SINE MIR 95 197 -11 1164 228 65 130 chr17 82129287 82129809 -7374744 - L2 LINE L2 0 3313 2826 405 310 70 11 chr17 82130222 82130409 -7374144 - L3 LINE CR1 -72 1505 1308 267 296 330 0 chr17 82130532 82130711 -7373842 + MIR SINE MIR 17 254 -8 1168 94 19 0 chr17 82130866 82131026 -7373527 - AluSg/x SINE Alu -16 296 134 2101 79 4 0 chr17 82131026 82131291 -7373262 - AluSc SINE Alu -20 289 24 921 174 11 74 chr17 82131981 82132171 -7372382 - MER45A DNA AcHobo 0 178 1 1943 99 74 0 chr17 82133131 82133415 -7371138 + AluSx SINE Alu 1 305 -7 2231 80 3 3 chr17 82133416 82133705 -7370848 + AluSc SINE Alu 1 289 -20 276 293 178 12 chr17 82134245 82134453 -7370100 - MIR SINE MIR -18 244 3 1751 93 4 35 chr17 82136177 82136436 -7368117 - AluSx SINE Alu -18 294 44 1039 142 7 0 chr17 82136437 82136592 -7367961 - FRAM SINE Alu -9 157 2 225 292 34 0 chr17 82138086 82138175 -7366378 + (CATA)n Simple_repeat Simple_repeat 2 93 0 371 233 133 22 chr17 82138175 82138265 -7366288 - L1MC4 LINE L1 -1335 6707 6608 1599 76 0 14 chr17 82140895 82141105 -7363448 + AluSg/x SINE Alu 83 289 -21 782 155 0 9 chr17 82141291 82141407 -7363146 + FLAM_A SINE Alu 2 116 -17 1231 151 87 9 chr17 82141431 82141649 -7362904 + AluJb SINE Alu 1 235 -77 1966 141 20 3 chr17 82143086 82143391 -7361162 - AluJo SINE Alu 0 312 3 189 255 21 0 chr17 82143407 82143454 -7361099 + MIR SINE MIR 119 166 -96 716 135 32 48 chr17 82145183 82145309 -7359244 + FLAM_C SINE Alu 2 125 -8 453 118 306 0 chr17 82147672 82147757 -7356796 + FLAM_C SINE Alu 17 127 -16 2219 89 0 0 chr17 82147763 82148054 -7356499 + AluSc SINE Alu 1 291 -18 2294 62 3 3 chr17 82152775 82153067 -7351486 - AluY SINE Alu -19 292 1 877 196 0 18 chr17 82153072 82153235 -7351318 - AluJb SINE Alu -16 296 137 2128 87 7 7 chr17 82153398 82153696 -7350857 - AluSc SINE Alu -11 298 1 180 0 0 0 chr17 82153969 82153989 -7350564 + (T)n Simple_repeat Simple_repeat 1 20 0 2333 62 3 7 chr17 82154049 82154354 -7350199 - AluY SINE Alu -7 304 1 2293 88 3 0 chr17 82154526 82154831 -7349722 + AluSg SINE Alu 3 308 -2 424 292 17 0 chr17 82155012 82155132 -7349421 + MIR3 SINE MIR 53 174 -34 1918 146 3 3 chr17 82156580 82156889 -7347664 - AluJb SINE Alu -3 309 1 2265 80 7 3 chr17 82156955 82157256 -7347297 - AluY SINE Alu -9 302 1 2072 85 11 0 chr17 82157271 82157572 -7346981 - AluSq SINE Alu 0 304 1 1716 130 10 43 chr17 82157574 82157873 -7346680 - AluSx SINE Alu -10 302 14 470 137 0 0 chr17 82157975 82158048 -7346505 + Alu SINE Alu 234 306 -6 34 24 0 0 chr17 82158093 82158134 -7346419 + AT_rich Low_complexity Low_complexity 1 41 0 1557 202 130 37 chr17 82158579 82159040 -7345513 + MLT1D LTR MaLR 1 504 -1 707 167 62 19 chr17 82159300 82159462 -7345091 + L1MB3 LINE L1 6010 6178 -5 287 253 181 3 chr17 82159832 82160059 -7344494 + Charlie7 DNA MER1_type 1 2612 0 413 212 291 24 chr17 82162042 82162139 -7342414 + MER3 DNA MER1_type 1 71 -138 1698 126 97 0 chr17 82162139 82162417 -7342136 - AluSx SINE Alu -7 305 1 413 212 291 24 chr17 82162417 82162484 -7342069 + MER3 DNA MER1_type 71 209 0 1273 77 10 71 chr17 82162679 82162759 -7341794 + L1PA8 LINE L1 5987 6070 -102 2503 43 0 0 chr17 82162759 82163058 -7341495 + AluY SINE Alu 1 299 -12 1273 77 10 71 chr17 82163058 82163173 -7341380 + L1PA8 LINE L1 6070 6170 -2 1909 149 0 13 chr17 82163217 82163526 -7341027 + AluJb SINE Alu 2 306 -6 1995 107 20 30 chr17 82164806 82165106 -7339447 + AluSx SINE Alu 1 297 -15 1281 89 0 59 chr17 82165107 82165310 -7339243 + AluY SINE Alu 107 297 -14 2317 101 0 0 chr17 82165318 82165624 -7338929 + AluSg SINE Alu 1 306 -4 1818 130 4 0 chr17 82167733 82168002 -7336551 + AluSq SINE Alu 33 302 -11 2031 113 7 3 chr17 82168953 82169244 -7335309 + AluSg SINE Alu 1 292 -18 2261 80 23 3 chr17 82169246 82169545 -7335008 + AluSg SINE Alu 3 307 -3 2046 103 7 4 chr17 82169612 82169913 -7334640 + AluSx SINE Alu 1 302 0 884 133 0 0 chr17 82170944 82171072 -7333481 - AluJb SINE Alu -184 128 1 3365 137 28 116 chr17 82171360 82172118 -7332435 + LTR8 LTR ERV1 1 691 0 265 307 33 59 chr17 82173481 82173634 -7330919 - MIR SINE MIR -11 251 103 195 42 0 0 chr17 82174613 82174637 -7329916 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 644 317 73 12 chr17 82174707 82174953 -7329600 - MIR SINE MIR 0 262 2 2138 72 31 3 chr17 82175395 82175686 -7328867 - AluY SINE Alu -12 299 1 429 112 33 57 chr17 82175826 82176068 -7328485 + AluSx SINE Alu 3 309 0 1971 134 3 3 chr17 82176089 82176387 -7328166 - AluSx SINE Alu -14 298 1 267 300 215 8 chr17 82176413 82176476 -7328077 - MER5A DNA MER1_type -6 183 134 1777 139 3 50 chr17 82176476 82176793 -7327760 + AluJo SINE Alu 7 308 -4 267 300 215 8 chr17 82176793 82176859 -7327694 - MER5A DNA MER1_type -55 134 27 635 236 29 35 chr17 82176887 82177061 -7327492 + MER5B DNA MER1_type 1 173 -5 2087 93 3 20 chr17 82178242 82178543 -7326010 - AluSp SINE Alu -16 297 2 201 39 0 0 chr17 82179968 82179994 -7324559 + (A)n Simple_repeat Simple_repeat 1 26 0 591 207 48 21 chr17 82180006 82180151 -7324402 + FRAM SINE Alu 28 176 0 2224 90 0 10 chr17 82180162 82180461 -7324092 + AluY SINE Alu 1 296 -15 571 181 0 0 chr17 82180464 82180558 -7323995 + AluSc SINE Alu 135 228 -81 814 221 205 47 chr17 82180615 82180869 -7323684 - AluSc SINE Alu -4 295 2 1853 164 0 16 chr17 82181004 82181316 -7323237 + AluJo SINE Alu 1 307 -5 34 24 0 0 chr17 82181361 82181402 -7323151 + AT_rich Low_complexity Low_complexity 1 41 0 1557 202 130 37 chr17 82181847 82182308 -7322245 + MLT1D LTR MaLR 1 504 -1 685 167 62 19 chr17 82182568 82182730 -7321823 + L1MB3 LINE L1 6010 6178 -5 245 262 164 6 chr17 82183144 82183327 -7321226 + Charlie7 DNA MER1_type 2401 2612 0 2735 13 0 3 chr17 82184237 82184549 -7320004 - AluYa5 SINE Alu 0 311 1 1400 182 115 19 chr17 82185104 82185361 -7319192 + AluJo SINE Alu 2 287 -15 2368 75 0 10 chr17 82185361 82185666 -7318887 - AluY SINE Alu -9 302 1 1400 182 115 19 chr17 82185666 82185677 -7318876 + AluJo SINE Alu 287 296 -6 722 150 7 0 chr17 82185692 82185832 -7318721 + L1MC2 LINE L1 5283 5423 -921 955 205 169 26 chr17 82185834 82185845 -7318708 - AluJo SINE Alu 0 312 304 1610 166 64 14 chr17 82185845 82186141 -7318412 - AluSx SINE Alu -1 311 1 955 205 169 26 chr17 82186141 82186402 -7318151 - AluJo SINE Alu -8 304 1 3539 149 11 72 chr17 82186402 82186792 -7317761 + L1MC2 LINE L1 5414 5826 -518 2246 97 3 0 chr17 82186792 82187090 -7317463 + AluSg SINE Alu 1 299 -11 3539 149 11 72 chr17 82187090 82187114 -7317439 + L1MC2 LINE L1 5826 5850 -494 2178 115 0 0 chr17 82187114 82187409 -7317144 + AluSx SINE Alu 9 303 -9 3539 149 11 72 chr17 82187409 82187780 -7316773 + L1MC2 LINE L1 5850 6152 -192 3053 110 11 5 chr17 82187779 82188339 -7316214 + L1M1 LINE L1 5176 5740 -565 * 1419 123 27 44 chr17 82188339 82188452 -7316101 + THE1B LTR MaLR 14 127 -330 926 203 6 0 chr17 82188452 82188615 -7315938 - FRAM SINE Alu -2 164 1 1419 123 27 44 chr17 82188615 82188855 -7315698 + THE1B LTR MaLR 127 370 -87 3454 96 48 63 chr17 82188855 82189277 -7315276 + L1MA3 LINE L1 5713 6140 -165 2452 53 3 3 chr17 82189277 82189581 -7314972 + AluY SINE Alu 1 304 -7 2329 88 0 0 chr17 82189586 82189892 -7314661 + AluSx SINE Alu 1 306 -6 3454 96 48 63 chr17 82189892 82189909 -7314644 + L1MA3 LINE L1 6144 6160 -145 2238 104 0 13 chr17 82189909 82190225 -7314328 + AluSx SINE Alu 1 312 0 3454 96 48 63 chr17 82190225 82190380 -7314173 + L1MA3 LINE L1 6160 6305 0 1419 123 27 44 chr17 82190380 82190408 -7314145 + THE1B LTR MaLR 370 452 -5 394 110 0 27 chr17 82190408 82190481 -7314072 + L1MC2 LINE L1 6144 6214 -130 566 131 0 0 chr17 82190481 82190565 -7313988 - AluJo SINE Alu -15 297 214 858 189 0 13 chr17 82190565 82190724 -7313829 - AluJo SINE Alu -155 157 1 391 216 17 43 chr17 82190725 82190841 -7313712 + L1MC2 LINE L1 6209 6321 -23 425 206 0 0 chr17 82190845 82190913 -7313640 + AluJ/FLAM SINE Alu 2 69 -243 505 158 0 0 chr17 82191015 82191097 -7313456 + AluS SINE Alu 228 309 -1 747 297 64 35 chr17 82191097 82191440 -7313113 + L2 LINE L2 2961 3313 0 2380 46 0 0 chr17 82191821 82192140 -7312413 - AluY SINE Alu 0 319 1 288 284 45 0 chr17 82192233 82192321 -7312232 - MIR SINE MIR -60 202 111 2317 89 0 0 chr17 82192410 82192713 -7311840 + AluSx SINE Alu 1 303 -9 990 118 0 0 chr17 82192714 82192858 -7311695 + AluSg/x SINE Alu 133 276 -34 203 30 0 61 chr17 82194403 82194436 -7310117 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 222 195 0 0 chr17 82195010 82195051 -7309502 + C-rich Low_complexity Low_complexity 2 42 0 28 0 0 0 chr17 82196506 82196534 -7308019 + GC_rich Low_complexity Low_complexity 1 28 0 1754 82 61 78 chr17 82196703 82196997 -7307556 - AluSq SINE Alu 0 313 25 1627 176 26 0 chr17 82197048 82197320 -7307233 - AluJo SINE Alu -31 281 3 2341 84 7 10 chr17 82210841 82211150 -7293403 - AluSx SINE Alu -4 308 1 981 158 6 6 chr17 82213299 82213463 -7291090 - AluJb SINE Alu -14 298 135 2044 132 7 3 chr17 82213517 82213813 -7290740 - AluSx SINE Alu -15 297 1 1125 143 0 0 chr17 82213825 82213986 -7290567 - AluSp SINE Alu -16 297 137 419 312 112 58 chr17 82214020 82214480 -7290073 + L1MB3 LINE L1 5293 5787 -377 940 108 0 0 chr17 82214786 82214916 -7289637 + AluSq/x SINE Alu 2 131 -182 2418 59 0 16 chr17 82215052 82215357 -7289196 + AluY SINE Alu 1 300 -11 466 259 21 0 chr17 82215428 82215571 -7288982 + L1MB8 LINE L1 5129 5274 -872 * 1403 183 8 47 chr17 82215551 82215696 -7288857 + L1MB8 LINE L1 5640 5789 -389 2360 89 0 9 chr17 82215696 82216012 -7288541 + AluSq SINE Alu 1 313 0 1403 183 8 47 chr17 82216012 82216227 -7288326 + L1MB8 LINE L1 5789 5986 -192 1552 209 7 13 chr17 82216292 82216599 -7287954 + AluJo SINE Alu 4 308 -4 809 203 74 21 chr17 82216611 82216818 -7287735 + L1MB3 LINE L1 5928 6151 -32 1988 106 17 33 chr17 82216818 82217120 -7287433 + AluSq SINE Alu 1 297 -16 809 203 74 21 chr17 82217120 82217154 -7287399 + L1MB3 LINE L1 6151 6182 -1 1867 107 70 0 chr17 82217183 82217482 -7287071 + AluSx SINE Alu 1 318 0 49 60 0 0 chr17 82217495 82217579 -7286974 + AT_rich Low_complexity Low_complexity 1 84 0 638 158 0 0 chr17 82217996 82218091 -7286462 - FLAM_C SINE Alu -28 115 21 412 274 18 9 chr17 82218433 82218546 -7286007 + L2 LINE L2 3150 3263 -9 1499 168 62 14 chr17 82218765 82218880 -7285673 + AluJo SINE Alu 1 109 -203 408 20 0 0 chr17 82218880 82218929 -7285624 + (CA)n Simple_repeat Simple_repeat 2 50 0 1499 168 62 14 chr17 82218929 82219104 -7285449 + AluJo SINE Alu 109 305 -7 448 347 94 14 chr17 82219214 82219427 -7285126 - MIR SINE MIR -12 250 21 2128 110 0 10 chr17 82221034 82221343 -7283210 - AluSx SINE Alu -6 306 1 2193 104 10 0 chr17 82221722 82222031 -7282522 - AluSp SINE Alu -1 312 1 201 152 0 0 chr17 82222042 82222075 -7282478 + L2 LINE L2 3261 3293 -20 2021 178 9 6 chr17 82222367 82222610 -7281943 - MER7A DNA MER2_type -2692 346 102 2042 105 0 0 chr17 82222610 82222887 -7281666 + AluSx SINE Alu 33 309 -3 2021 178 9 6 chr17 82222887 82222986 -7281567 - MER7A DNA MER2_type -2936 102 5 22 0 0 0 chr17 82223123 82223145 -7281408 + AT_rich Low_complexity Low_complexity 1 22 0 835 148 7 52 chr17 82223624 82223779 -7280774 - AluJo SINE Alu -164 148 1 2082 136 0 0 chr17 82223864 82224166 -7280387 + AluSq SINE Alu 1 302 -11 1269 103 33 5 chr17 82224171 82224355 -7280198 - AluSg/x SINE Alu -39 273 85 914 153 25 0 chr17 82225253 82225410 -7279143 + AluJb SINE Alu 130 290 -22 1433 131 36 0 chr17 82225439 82225661 -7278892 - AluSg/x SINE Alu -14 298 69 1172 130 117 135 chr17 82225663 82225901 -7278652 - pTR5 LTR ERV1 -2044 394 29 231 226 0 0 chr17 82225901 82225954 -7278599 - LTR30 LTR ERV1 -126 596 544 6148 122 66 66 chr17 82225954 82227234 -7277319 - pTR5 LTR ERV1 -413 2025 747 763 196 6 75 chr17 82227234 82227407 -7277146 - AluJo SINE Alu -108 204 44 442 260 94 0 chr17 82227408 82227535 -7277018 - HAL1 LINE L1 -175 2332 2194 741 210 42 0 chr17 82227600 82227743 -7276810 + AluJb SINE Alu 148 296 -16 2299 94 13 0 chr17 82228023 82228330 -7276223 + AluSx SINE Alu 2 312 0 524 268 26 98 chr17 82228672 82228873 -7275680 + MIR SINE MIR 3 182 -80 843 176 0 0 chr17 82228873 82229004 -7275549 + FLAM_C SINE Alu 1 131 -2 524 268 26 98 chr17 82229004 82229067 -7275486 + MIR SINE MIR 182 248 -14 1315 158 114 22 chr17 82229181 82229454 -7275099 + AluJo SINE Alu 1 298 -14 1903 147 7 3 chr17 82229456 82229755 -7274798 + AluSx SINE Alu 1 300 -12 242 146 0 36 chr17 82230068 82230123 -7274430 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 2095 100 0 55 chr17 82230343 82230673 -7273880 - AluSx SINE Alu 0 312 1 317 233 144 55 chr17 82230954 82231100 -7273453 + MIR SINE MIR 103 261 -1 2065 77 0 0 chr17 82231301 82231560 -7272993 - AluY SINE Alu -17 294 36 1490 147 60 4 chr17 82232846 82233078 -7271475 + AluJb SINE Alu 1 245 -67 772 172 0 8 chr17 82233166 82233300 -7271253 - FLAM_C SINE Alu 0 143 11 471 213 153 7 chr17 82233608 82233758 -7270795 + L1ME3A LINE L1 5994 6165 -5 212 167 24 0 chr17 82234389 82234431 -7270122 + (CGG)n Simple_repeat Simple_repeat 2 44 0 202 183 56 28 chr17 82234465 82234536 -7270017 + (CCGCG)n Simple_repeat Simple_repeat 1 73 0 213 98 0 59 chr17 82234667 82234718 -7269835 + (CGGGGG)n Simple_repeat Simple_repeat 6 53 0 24 32 0 0 chr17 82234823 82234854 -7269699 + GC_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr17 82234998 82235031 -7269522 + GC_rich Low_complexity Low_complexity 1 33 0 804 127 0 89 chr17 82236522 82236679 -7267874 - FLAM_C SINE Alu 0 143 1 2049 80 53 30 chr17 82236684 82236984 -7267569 - AluSp SINE Alu -6 307 1 328 205 26 13 chr17 82237255 82237333 -7267220 - MIR3 SINE MIR -48 160 82 2300 96 0 3 chr17 82237757 82238060 -7266493 - AluSx SINE Alu -10 302 1 305 208 45 91 chr17 82238502 82238656 -7265897 + MIR3 SINE MIR 4 150 -58 22 70 0 0 chr17 82239745 82239788 -7264765 + AT_rich Low_complexity Low_complexity 1 43 0 733 244 41 5 chr17 82243770 82243967 -7260586 + MIR SINE MIR 23 226 -36 232 135 11 191 chr17 82244244 82244333 -7260220 - MIR3 SINE MIR -50 158 86 193 220 60 0 chr17 82244611 82244661 -7259892 + MIR SINE MIR 111 163 -99 565 211 0 26 chr17 82246548 82246863 -7257690 + (CA)n Simple_repeat Simple_repeat 1 306 0 821 140 0 37 chr17 82250086 82250222 -7254331 + FLAM_C SINE Alu 1 131 -2 2247 92 3 0 chr17 82252618 82252910 -7251643 + AluSq SINE Alu 1 293 -20 2061 137 0 6 chr17 82252910 82253222 -7251331 + AluSx SINE Alu 1 311 -1 1073 156 0 60 chr17 82253367 82253562 -7250991 + L1MB7 LINE L1 5178 5354 -830 2240 97 3 3 chr17 82253562 82253871 -7250682 + AluSg SINE Alu 1 309 -1 1073 156 0 60 chr17 82253871 82253985 -7250568 + L1MB7 LINE L1 5354 5473 -711 2037 107 7 10 chr17 82253985 82254146 -7250407 - AluSx SINE Alu -15 297 136 2086 91 3 7 chr17 82254146 82254457 -7250096 - AluSg SINE Alu 0 310 1 2037 107 7 10 chr17 82254457 82254593 -7249960 - AluSx SINE Alu -176 136 1 1943 113 3 3 chr17 82254622 82254905 -7249648 + AluSq SINE Alu 31 313 0 2317 68 0 10 chr17 82254916 82255212 -7249341 + AluY SINE Alu 1 293 -18 2675 164 30 2 chr17 82255214 82255685 -7248868 + L1MB7 LINE L1 5686 6169 -15 1623 113 0 0 chr17 82255693 82255922 -7248631 + AluSq SINE Alu 76 304 -9 421 17 35 0 chr17 82256056 82256114 -7248439 + (CA)n Simple_repeat Simple_repeat 1 60 0 2183 96 3 6 chr17 82257126 82257438 -7247115 + AluSx SINE Alu 1 311 -1 2118 112 0 10 chr17 82257448 82257752 -7246801 + AluSx SINE Alu 1 301 -11 2503 71 0 0 chr17 82257848 82258159 -7246394 + AluY SINE Alu 1 311 0 1989 135 7 0 chr17 82258224 82258512 -7246041 - AluJo SINE Alu -22 290 1 2076 98 3 44 chr17 82258681 82258997 -7245556 + AluSp SINE Alu 1 303 -10 1643 161 10 20 chr17 82259412 82259710 -7244843 - AluJb SINE Alu -17 295 1 254 439 0 0 chr17 82261038 82261209 -7243344 + (CAGGC)n Simple_repeat Simple_repeat 5 175 0 * 344 402 0 0 chr17 82261197 82261399 -7243154 + (CAAAC)n Simple_repeat Simple_repeat 1 202 0 382 401 0 0 chr17 82261820 82261992 -7242561 + (CAGGC)n Simple_repeat Simple_repeat 4 175 0 1773 130 23 0 chr17 82263207 82263468 -7241085 + AluSq SINE Alu 40 306 -7 2224 114 0 0 chr17 82263556 82263854 -7240699 + AluSx SINE Alu 1 298 -14 1869 114 33 4 chr17 82263975 82264095 -7240458 + AluSc SINE Alu 1 116 -194 330 26 0 0 chr17 82264095 82264134 -7240419 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1869 114 33 4 chr17 82264134 82264315 -7240238 + AluSc SINE Alu 116 310 0 1884 130 45 3 chr17 82264398 82264690 -7239863 + AluSx SINE Alu 1 304 -8 2923 257 15 64 chr17 82264890 82264968 -7239585 + L1MEc LINE L1 37 117 -6279 2216 102 0 0 chr17 82264968 82265263 -7239290 + AluSg SINE Alu 1 295 -15 2923 257 15 64 chr17 82265263 82265532 -7239021 + L1MEc LINE L1 117 398 -5998 1956 136 30 0 chr17 82265532 82265827 -7238726 + AluSx SINE Alu 3 306 -6 2923 257 15 64 chr17 82265827 82266250 -7238303 + L1MEc LINE L1 398 755 -5641 2204 105 0 0 chr17 82266250 82266555 -7237998 + AluSx SINE Alu 1 305 -7 2923 257 15 64 chr17 82266555 82266738 -7237815 + L1MEc LINE L1 755 945 -5451 1353 173 38 48 chr17 82266758 82266896 -7237657 - AluJo SINE Alu -26 286 148 2010 113 30 7 chr17 82266896 82267197 -7237356 - AluSx SINE Alu -4 308 1 2389 47 17 3 chr17 82267207 82267504 -7237049 - AluY SINE Alu -10 301 1 1353 173 38 48 chr17 82267504 82267643 -7236910 - AluJo SINE Alu -173 139 1 2321 87 0 0 chr17 82267643 82267941 -7236612 - AluSx SINE Alu -14 298 1 2133 96 7 0 chr17 82268480 82268771 -7235782 + AluSx SINE Alu 1 293 -19 2240 64 0 20 chr17 82268858 82269155 -7235398 - AluSc SINE Alu -18 291 1 1485 151 42 35 chr17 82269672 82269795 -7234758 + AluJb SINE Alu 1 122 -190 2204 90 0 7 chr17 82269795 82270084 -7234469 + AluSx SINE Alu 1 287 -25 1485 151 42 35 chr17 82270084 82270245 -7234308 + AluJb SINE Alu 122 287 -25 1859 149 7 0 chr17 82270312 82270607 -7233946 + AluSx SINE Alu 1 297 -15 348 172 0 152 chr17 82270630 82270729 -7233824 + HsTC2 DNA Tc2 7 90 -1808 1173 118 0 0 chr17 82270729 82270898 -7233655 - AluSg/x SINE Alu -13 299 131 414 0 0 0 chr17 82270898 82270944 -7233609 + (TG)n Simple_repeat Simple_repeat 1 46 0 1955 108 11 0 chr17 82270944 82271222 -7233331 - AluSx SINE Alu -31 281 1 936 219 23 38 chr17 82271418 82271847 -7232706 + MLT1D LTR MaLR 1 504 -1 2054 120 0 3 chr17 82271909 82272209 -7232344 - AluSq SINE Alu -14 299 1 2434 52 0 10 chr17 82272614 82272919 -7231634 + AluY SINE Alu 1 302 -9 516 300 9 43 chr17 82273040 82273250 -7231303 + L1MC1 LINE L1 5414 5616 -2192 413 212 291 24 chr17 82274437 82274534 -7230019 + MER3 DNA MER1_type 1 71 -138 1698 126 97 0 chr17 82274534 82274812 -7229741 - AluSx SINE Alu -7 305 1 413 212 291 24 chr17 82274812 82274879 -7229674 + MER3 DNA MER1_type 71 209 0 1273 77 10 71 chr17 82275074 82275154 -7229399 + L1PA8 LINE L1 5987 6070 -102 2488 47 0 0 chr17 82275154 82275453 -7229100 + AluY SINE Alu 1 299 -12 1273 77 10 71 chr17 82275453 82275568 -7228985 + L1PA8 LINE L1 6070 6170 -2 1900 149 0 13 chr17 82275612 82275920 -7228633 + AluJb SINE Alu 2 305 -7 22 35 0 0 chr17 82277093 82277122 -7227431 + AT_rich Low_complexity Low_complexity 1 29 0 1740 101 112 8 chr17 82277200 82277468 -7227085 + AluY SINE Alu 1 296 -15 1813 145 10 19 chr17 82277497 82277807 -7226746 - AluJb SINE Alu 0 312 6 2033 135 7 0 chr17 82279378 82279675 -7224878 - AluSx SINE Alu -13 299 1 1585 145 0 79 chr17 82279682 82279857 -7224696 - AluJo SINE Alu -22 290 148 1507 141 122 11 chr17 82279857 82280120 -7224433 - AluSg1 SINE Alu -17 292 1 1585 145 0 79 chr17 82280120 82280248 -7224305 - AluJo SINE Alu -164 148 11 469 252 199 8 chr17 82280365 82280641 -7223912 + L1ME LINE L1 5496 5824 -297 1321 174 18 32 chr17 82280678 82280959 -7223594 + AluJo SINE Alu 22 298 -14 2151 99 3 0 chr17 82280962 82281256 -7223297 + AluSc SINE Alu 1 295 -14 761 170 139 12 chr17 82281347 82281512 -7223041 + AluSg/x SINE Alu 118 303 -7 2401 74 0 3 chr17 82281544 82281856 -7222697 + AluY SINE Alu 1 311 0 1728 160 17 3 chr17 82282260 82282548 -7222005 + L1MC1 LINE L1 6029 6320 -13 800 146 7 7 chr17 82283381 82283518 -7221035 + AluJo SINE Alu 1 137 -175 1462 169 28 63 chr17 82283560 82283707 -7220846 + AluJo SINE Alu 1 152 -160 2112 110 7 7 chr17 82283707 82284007 -7220546 + AluSx SINE Alu 1 300 -12 1462 169 28 63 chr17 82284007 82284178 -7220375 + AluJo SINE Alu 152 308 -4 278 43 101 0 chr17 82284185 82284254 -7220299 + (TA)n Simple_repeat Simple_repeat 2 77 0 2209 114 0 0 chr17 82285101 82285399 -7219154 + AluSx SINE Alu 6 303 -9 432 260 58 29 chr17 82285401 82285599 -7218954 + MIR SINE MIR 2 262 0 1668 151 62 21 chr17 82285705 82285996 -7218557 + AluJo SINE Alu 1 303 -9 544 145 57 24 chr17 82286454 82286578 -7217975 - MER58A DNA MER1_type 0 152 25 569 154 57 16 chr17 82286724 82286847 -7217706 - MER58A DNA MER1_type 0 152 25 2144 98 7 3 chr17 82286975 82287271 -7217282 + AluSx SINE Alu 1 297 -15 454 131 172 0 chr17 82287430 82287529 -7217024 - LTR9B LTR ERV1 -84 560 445 2179 115 0 0 chr17 82287538 82287834 -7216719 - AluSq SINE Alu -17 296 1 235 343 0 30 chr17 82287845 82287944 -7216609 + MIR SINE MIR 90 185 -77 1750 159 35 7 chr17 82288282 82288572 -7215981 - AluJo SINE Alu -14 298 1 2117 111 3 3 chr17 82289006 82289303 -7215250 + AluSp SINE Alu 1 297 -16 1132 129 6 11 chr17 82289303 82289481 -7215072 + AluSg/x SINE Alu 132 308 -1 635 165 8 50 chr17 82289768 82289889 -7214664 - FLAM_A SINE Alu -17 125 10 216 86 0 0 chr17 82289989 82290024 -7214529 + (TA)n Simple_repeat Simple_repeat 1 35 0 2223 119 0 0 chr17 82290102 82290413 -7214140 + AluSx SINE Alu 1 311 -1 2097 113 27 0 chr17 82290429 82290721 -7213832 + AluSx SINE Alu 1 300 -12 2089 123 0 0 chr17 82290791 82291103 -7213450 + AluSx SINE Alu 1 312 0 1066 83 0 0 chr17 82291104 82291249 -7213304 + AluSc SINE Alu 165 309 0 1994 104 7 4 chr17 82291555 82291833 -7212720 + AluSx SINE Alu 1 279 -33 312 91 0 0 chr17 82291833 82291877 -7212676 + (CA)n Simple_repeat Simple_repeat 1 44 0 417 123 0 0 chr17 82293400 82293465 -7211088 + (CCG)n Simple_repeat Simple_repeat 2 66 0 492 267 73 7 chr17 82294141 82294291 -7210262 + MIR SINE MIR 32 191 -71 1349 399 7 0 chr17 82294295 82294591 -7209962 - AluSq SINE Alu -15 298 1 1682 146 91 0 chr17 82294674 82294949 -7209604 + AluSx SINE Alu 1 300 -12 2432 45 3 0 chr17 82295255 82295545 -7209008 - AluY SINE Alu -20 291 1 2108 125 0 7 chr17 82296170 82296466 -7208087 - AluSx SINE Alu -18 294 1 276 265 85 33 chr17 82296788 82296974 -7207579 + MIR3 SINE MIR 2 254 -8 180 306 105 73 chr17 82297281 82297405 -7207148 + MIR SINE MIR 107 234 -28 942 0 8 17 chr17 82297544 82297664 -7206889 + (CA)n Simple_repeat Simple_repeat 1 119 0 231 36 0 0 chr17 82297902 82297930 -7206623 + (CCGGG)n Simple_repeat Simple_repeat 1 28 0 577 191 7 7 chr17 82299533 82299674 -7204879 + CT-rich Low_complexity Low_complexity 1 141 0 1897 129 13 32 chr17 82299695 82300006 -7204547 - AluSq SINE Alu -8 305 1 180 380 0 14 chr17 82300049 82300120 -7204433 + MIR SINE MIR 43 112 -96 232 287 123 0 chr17 82300122 82300244 -7204309 - L2 LINE L2 -4 3268 3132 197 281 141 0 chr17 82300347 82300411 -7204142 + MIR3 SINE MIR 109 181 -27 180 290 231 18 chr17 82301552 82301721 -7202832 - L2 LINE L2 -429 2885 2681 2145 112 0 19 chr17 82301878 82302190 -7202363 + AluSx SINE Alu 1 306 -6 234 263 21 42 chr17 82302204 82302299 -7202254 + HAL1 LINE L1 5 97 -2410 * 1574 210 39 21 chr17 82302291 82302757 -7201796 + L1ME2 LINE L1 5654 6166 0 2065 113 7 7 chr17 82302761 82303061 -7201492 + AluSg SINE Alu 1 300 -10 890 292 79 41 chr17 82303328 82303845 -7200708 + HAL1 LINE L1 416 952 -1555 2346 83 0 0 chr17 82303847 82304147 -7200406 + AluY SINE Alu 1 300 -11 261 0 0 0 chr17 82304148 82304177 -7200376 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 524 145 0 0 chr17 82304177 82304253 -7200300 - AluS SINE Alu -237 76 1 2276 87 0 7 chr17 82304253 82304553 -7200000 - AluSx SINE Alu -14 298 1 256 293 103 29 chr17 82304592 82304834 -7199719 + HAL1 LINE L1 1952 2211 -296 240 319 69 28 chr17 82304836 82304929 -7199624 + HAL1 LINE L1 2245 2348 -159 2165 125 0 0 chr17 82304929 82305234 -7199319 + AluSx SINE Alu 1 305 -7 240 319 69 28 chr17 82305234 82305284 -7199269 + HAL1 LINE L1 2348 2394 -113 2493 46 0 3 chr17 82305381 82305683 -7198870 + AluY SINE Alu 1 301 -10 217 204 0 0 chr17 82305734 82305748 -7198805 + A-rich Low_complexity Low_complexity 1 14 -35 1967 161 0 0 chr17 82305748 82306059 -7198494 + AluJb SINE Alu 1 311 -1 2272 107 0 3 chr17 82306063 82306372 -7198181 + AluSx SINE Alu 5 312 0 217 204 0 0 chr17 82306372 82306401 -7198152 + A-rich Low_complexity Low_complexity 16 49 0 207 245 0 0 chr17 82308885 82308938 -7195615 + C-rich Low_complexity Low_complexity 3 55 0 2049 98 46 0 chr17 82309610 82309895 -7194658 + AluSx SINE Alu 1 298 -14 186 231 77 0 chr17 82309973 82310025 -7194528 - MIR SINE MIR -128 134 79 229 328 46 8 chr17 82310025 82310156 -7194397 + L1MC4a LINE L1 7540 7675 -133 894 193 0 63 chr17 82310156 82310363 -7194190 - AluJo SINE Alu -4 308 115 2395 74 3 0 chr17 82310363 82310673 -7193880 + AluY SINE Alu 1 311 0 403 157 11 11 chr17 82310685 82310774 -7193779 + L1MC4 LINE L1 7807 7895 -147 2136 91 10 26 chr17 82310825 82311134 -7193419 + AluSx SINE Alu 1 304 -8 644 221 37 0 chr17 82311274 82311410 -7193143 - MER5B DNA MER1_type -7 171 31 191 275 0 0 chr17 82312423 82312463 -7192090 - MIR SINE MIR -55 153 114 27 29 0 0 chr17 82312667 82312701 -7191852 + AT_rich Low_complexity Low_complexity 1 34 0 208 312 0 13 chr17 82314876 82314953 -7189600 + G-rich Low_complexity Low_complexity 4 79 0 993 69 0 62 chr17 82320100 82320245 -7184308 - AluSp/q SINE Alu -13 300 165 235 312 36 95 chr17 82320321 82320542 -7184011 + MIR SINE MIR 44 251 -11 2308 42 49 0 chr17 82320660 82320945 -7183608 - AluY SINE Alu -12 299 1 474 283 128 6 chr17 82322516 82322696 -7181857 + MIR SINE MIR 32 233 -29 295 280 65 28 chr17 82323046 82323153 -7181400 + L2 LINE L2 3142 3252 -20 225 94 0 0 chr17 82323726 82323758 -7180795 + (CCA)n Simple_repeat Simple_repeat 1 32 0 2367 68 0 10 chr17 82324601 82324908 -7179645 - AluY SINE Alu -7 304 1 1853 149 3 20 chr17 82324908 82325210 -7179343 - AluJb SINE Alu -15 297 1 2411 77 3 0 chr17 82326092 82326402 -7178151 + AluSx SINE Alu 1 311 -1 2338 70 0 22 chr17 82333291 82333604 -7170949 - AluSc SINE Alu -3 306 1 180 372 85 0 chr17 82333750 82333879 -7170674 + L2 LINE L2 2919 3058 -214 237 232 18 0 chr17 82333960 82334016 -7170537 - L2 LINE L2 0 3313 3257 * 240 285 80 51 chr17 82334013 82334150 -7170403 + L2 LINE L2 3126 3266 -6 582 306 114 49 chr17 82334181 82334586 -7169967 + L2 LINE L2 2883 3313 0 412 212 0 0 chr17 82334931 82335016 -7169537 - FLAM_C SINE Alu -6 137 53 349 301 8 68 chr17 82335124 82335257 -7169296 + MIR SINE MIR 18 142 -66 433 167 178 35 chr17 82336122 82336296 -7168257 - L1ME4a LINE L1 0 6121 5923 816 153 0 0 chr17 82336340 82336458 -7168095 - FLAM_C SINE Alu -15 118 1 234 315 122 6 chr17 82336520 82336701 -7167852 - L1ME4a LINE L1 -340 5781 5580 305 293 179 24 chr17 82336738 82336950 -7167603 - L1ME4a LINE L1 -2259 5549 5305 225 276 59 35 chr17 82337172 82337342 -7167211 - L1P LINE L1 -1072 5074 4901 2042 129 0 7 chr17 82339524 82339833 -7164720 - AluSx SINE Alu -5 307 1 186 296 0 0 chr17 82340950 82341038 -7163515 + A-rich Low_complexity Low_complexity 1 88 0 1784 134 72 12 chr17 82341215 82341535 -7163018 + MER44D DNA MER2_type 1 609 0 620 135 0 0 chr17 82341615 82341711 -7162842 - AluSg/x SINE Alu -1 309 214 1959 126 3 3 chr17 82342022 82342316 -7162237 - AluSx SINE Alu -18 294 1 2044 121 0 0 chr17 82342324 82342613 -7161940 - AluSx SINE Alu -23 289 1 183 156 0 0 chr17 82342868 82342900 -7161653 + GA-rich Low_complexity Low_complexity 2 33 0 2214 264 119 19 chr17 82344367 82345305 -7159248 - HAL1 LINE L1 0 2507 1476 1177 241 91 20 chr17 82345327 82345776 -7158777 - HAL1 LINE L1 -1124 1383 903 874 134 0 0 chr17 82345783 82345910 -7158643 - FLAM_C SINE Alu -16 127 1 2162 103 3 7 chr17 82345918 82346219 -7158334 - AluSx SINE Alu -12 300 1 982 227 121 22 chr17 82346243 82346556 -7157997 - HAL1 LINE L1 -1605 902 559 1304 150 10 5 chr17 82346577 82346784 -7157769 - AluJb SINE Alu -21 291 84 1616 220 72 78 chr17 82346787 82347227 -7157326 - HAL1 LINE L1 -1968 539 98 2279 92 0 0 chr17 82347227 82347530 -7157023 - AluY SINE Alu -8 303 1 2049 119 3 0 chr17 82347533 82347826 -7156727 - AluSx SINE Alu -18 294 1 1616 220 72 78 chr17 82347826 82347923 -7156630 - HAL1 LINE L1 -2411 96 1 269 186 266 18 chr17 82347984 82348097 -7156456 - MIR SINE MIR -10 252 112 21 0 0 0 chr17 82348497 82348518 -7156035 + AT_rich Low_complexity Low_complexity 1 21 0 595 165 68 0 chr17 82348545 82348648 -7155905 + AluJb SINE Alu 169 278 -34 2221 83 3 49 chr17 82348648 82348972 -7155581 + AluSp SINE Alu 1 309 -4 2546 52 0 0 chr17 82349343 82349651 -7154902 + AluY SINE Alu 1 308 -3 251 267 83 58 chr17 82350207 82350327 -7154226 - MIR SINE MIR -86 176 54 21 0 0 0 chr17 82350405 82350426 -7154127 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr17 82351406 82351433 -7153120 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 812 255 36 33 chr17 82351516 82351818 -7152735 - L1ME LINE L1 -301 5820 5518 201 176 0 0 chr17 82352159 82352193 -7152360 + A-rich Low_complexity Low_complexity 1 34 0 181 352 93 9 chr17 82352643 82352751 -7151802 - L2 LINE L2 -224 3048 2932 21 0 0 0 chr17 82352751 82352772 -7151781 + AT_rich Low_complexity Low_complexity 1 21 0 270 264 28 0 chr17 82352889 82352961 -7151592 + MER52A LTR ERV1 1 74 -1681 323 174 141 11 chr17 82353498 82353590 -7150963 + MER52A LTR ERV1 21 124 -1631 5197 158 65 123 chr17 82353646 82354982 -7149571 + MER52A LTR ERV1 488 1755 0 620 292 18 12 chr17 82354982 82355150 -7149403 - MIR SINE MIR -29 233 65 1790 159 10 3 chr17 82355450 82355746 -7148807 + AluJo SINE Alu 1 298 -14 1927 123 10 3 chr17 82355748 82356040 -7148513 + AluSx SINE Alu 1 294 -18 298 214 0 18 chr17 82356828 82356884 -7147669 - L2 LINE L2 -15 3257 3203 823 165 8 0 chr17 82356928 82357061 -7147492 - AluJb SINE Alu -178 134 1 673 161 0 54 chr17 82357067 82357197 -7147356 - L1MB3 LINE L1 -3 6180 6058 487 262 16 16 chr17 82357353 82357475 -7147078 - MIR SINE MIR -120 142 21 2188 117 7 0 chr17 82357964 82358273 -7146280 + AluSx SINE Alu 1 311 -1 205 293 49 37 chr17 82358297 82358379 -7146174 - L2 LINE L2 -7 3265 3183 315 0 0 0 chr17 82358788 82358823 -7145730 + (TG)n Simple_repeat Simple_repeat 2 36 0 318 222 20 50 chr17 82359111 82359210 -7145343 + L1MC4 LINE L1 6614 6709 -1333 2108 60 0 25 chr17 82359296 82359577 -7144976 - AluSp SINE Alu -39 274 1 470 260 27 27 chr17 82359577 82359723 -7144830 + MER5A DNA MER1_type 44 189 0 969 128 26 0 chr17 82359791 82359947 -7144606 - FAM SINE Alu -6 43 1 360 167 17 50 chr17 82360021 82360141 -7144412 - L1MC4a LINE L1 -741 7067 6952 2076 120 0 3 chr17 82360248 82360548 -7144005 + AluSx SINE Alu 1 299 -13 2635 14 0 0 chr17 82361812 82362109 -7142444 - AluY SINE Alu -14 297 1 26 30 0 0 chr17 82362300 82362333 -7142220 + AT_rich Low_complexity Low_complexity 1 33 0 2336 89 0 3 chr17 82362564 82362877 -7141676 + AluSq SINE Alu 1 312 -1 2028 111 0 0 chr17 82363002 82363324 -7141229 + AluSx SINE Alu 5 326 0 2202 106 0 6 chr17 82363512 82363824 -7140729 - AluSg SINE Alu 0 310 1 1958 142 0 13 chr17 82363922 82364238 -7140315 - AluSx SINE Alu 0 312 1 2372 193 78 19 chr17 82365103 82365678 -7138875 + L1MD3 LINE L1 7368 7976 -19 335 320 74 20 chr17 82365698 82365860 -7138693 + MIR SINE MIR 4 175 -63 992 208 279 12 chr17 82365872 82366385 -7138168 - LTR50 LTR ERVL 0 795 57 1894 159 7 0 chr17 82366511 82366807 -7137746 - AluSx SINE Alu -14 298 1 786 122 0 24 chr17 82366847 82366970 -7137583 + AluJb SINE Alu 188 307 -5 2172 60 42 3 chr17 82366978 82367262 -7137291 + AluY SINE Alu 1 295 -16 580 140 243 0 chr17 82367270 82367377 -7137176 + FLAM_C SINE Alu 1 133 0 1640 173 0 24 chr17 82367534 82367671 -7136882 + AluJo SINE Alu 1 140 -172 2213 75 31 0 chr17 82367671 82367963 -7136590 + AluSg1 SINE Alu 1 301 -8 1640 173 0 24 chr17 82367963 82368120 -7136433 + AluJo SINE Alu 140 288 -24 302 340 103 26 chr17 82368701 82368857 -7135696 + L2 LINE L2 3101 3268 -4 465 278 16 57 chr17 82369105 82369173 -7135380 + MIR SINE MIR 8 77 -177 1418 157 80 0 chr17 82369173 82369459 -7135094 - AluJb SINE Alu -3 309 1 465 278 16 57 chr17 82369459 82369582 -7134971 + MIR SINE MIR 77 191 -63 1134 201 29 4 chr17 82370406 82370645 -7133908 - L1ME1 LINE L1 -1 6165 5921 584 299 79 58 chr17 82370988 82371074 -7133479 + HAL1 LINE L1 39 122 -2385 2422 60 0 0 chr17 82371074 82371372 -7133181 + AluY SINE Alu 1 298 -13 584 299 79 58 chr17 82371372 82371663 -7132890 + HAL1 LINE L1 122 424 -2083 * 1218 214 151 19 chr17 82371662 82372040 -7132513 + L1ME3A LINE L1 5396 5823 -347 2262 162 38 42 chr17 82372113 82372564 -7131989 + MER66B LTR ERV1 7 455 -31 1046 234 105 7 chr17 82372573 82372859 -7131694 + L1ME3A LINE L1 5847 6160 -10 988 257 87 52 chr17 82373018 82373399 -7131154 + LTR16A1 LTR ERVL 60 453 -4 330 228 40 20 chr17 82373411 82373512 -7131041 + HERV16 LTR ERVL 28 130 -4866 804 159 0 15 chr17 82373724 82373856 -7130697 + FLAM_C SINE Alu 3 132 -1 851 178 23 17 chr17 82373903 82374077 -7130476 - FRAM SINE Alu -7 169 1 617 290 99 57 chr17 82374113 82374586 -7129967 + HERV16 LTR ERVL 442 934 -4062 303 282 141 69 chr17 82374953 82375215 -7129338 + L2 LINE L2 2576 2856 -458 187 303 119 55 chr17 82375328 82375437 -7129116 + L2 LINE L2 3155 3270 -2 1585 146 16 4 chr17 82375642 82375895 -7128658 - AluJb SINE Alu -56 256 1 204 40 0 0 chr17 82375912 82375937 -7128616 + (A)n Simple_repeat Simple_repeat 1 25 0 2348 56 0 31 chr17 82376297 82376618 -7127935 + AluY SINE Alu 1 311 0 1999 139 57 14 chr17 82376641 82376993 -7127560 + L1MB2 LINE L1 5717 6083 -88 659 264 61 87 chr17 82377481 82377545 -7127008 - L1ME4a LINE L1 -4 6117 6053 1748 132 6 80 chr17 82377545 82377871 -7126682 + AluJo SINE Alu 1 302 -10 659 264 61 87 chr17 82377871 82378360 -7126193 - L1ME4a LINE L1 -68 6053 5578 387 0 0 0 chr17 82378470 82378513 -7126040 + (CA)n Simple_repeat Simple_repeat 1 43 0 1839 146 10 0 chr17 82379344 82379632 -7124921 - AluSx SINE Alu -21 291 1 257 279 13 25 chr17 82379669 82379748 -7124805 - MIR SINE MIR -66 142 65 2100 120 3 0 chr17 82379794 82380093 -7124460 - AluSq SINE Alu -13 300 1 2517 49 0 0 chr17 82380102 82380408 -7124145 - AluY SINE Alu -5 306 1 367 269 148 74 chr17 82380586 82380884 -7123669 + L2 LINE L2 2953 3272 0 2105 116 0 22 chr17 82381108 82381428 -7123125 - AluSq SINE Alu 0 313 1 207 139 0 0 chr17 82381429 82381465 -7123088 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 1790 156 30 0 chr17 82381470 82381772 -7122781 - AluJb SINE Alu 0 312 2 1843 117 53 0 chr17 82381800 82382105 -7122448 + AluSc SINE Alu 1 319 0 1400 218 10 14 chr17 82382293 82382586 -7121967 + AluJb SINE Alu 5 296 -16 1177 173 122 7 chr17 82382864 82383135 -7121418 + AluSq SINE Alu 1 302 -1 1684 173 0 23 chr17 82383475 82383781 -7120772 + AluJo SINE Alu 1 299 -13 1505 161 34 24 chr17 82384266 82384558 -7119995 - AluJo SINE Alu -11 301 7 622 252 193 14 chr17 82384677 82384895 -7119658 + MIR SINE MIR 6 262 0 2069 113 0 7 chr17 82385037 82385330 -7119223 + AluSx SINE Alu 7 297 -15 670 138 0 73 chr17 82385448 82385571 -7118982 - FLAM_A SINE Alu -19 114 1 1471 95 59 18 chr17 82385727 82385948 -7118605 - MER30 DNA MER1_type 0 230 1 24 0 0 0 chr17 82385989 82386013 -7118540 + AT_rich Low_complexity Low_complexity 1 24 0 2278 84 0 3 chr17 82386100 82386398 -7118155 - AluSc SINE Alu -11 298 2 2402 59 13 0 chr17 82386654 82386958 -7117595 + AluY SINE Alu 2 309 -2 1905 152 0 0 chr17 82387150 82387446 -7117107 - AluSx SINE Alu -16 296 1 404 167 0 0 chr17 82387510 82387576 -7116977 + L2 LINE L2 3193 3258 -14 256 284 15 0 chr17 82387905 82387972 -7116581 + MIR SINE MIR 195 262 0 198 279 200 36 chr17 82387948 82388113 -7116440 + MIR SINE MIR 71 262 0 * 743 187 91 35 chr17 82388225 82388423 -7116130 - L2 LINE L2 -2 3311 3103 2016 136 3 0 chr17 82388921 82389222 -7115331 + AluSx SINE Alu 1 302 -10 4369 163 52 51 chr17 82389553 82389630 -7114923 + MER21B LTR ERV1 1 76 -787 2182 100 3 0 chr17 82389630 82389929 -7114624 + AluSx SINE Alu 1 300 -12 4369 163 52 51 chr17 82389929 82390693 -7113860 + MER21B LTR ERV1 76 843 -20 1516 164 6 91 chr17 82391503 82391898 -7112655 + AluJo SINE Alu 1 366 0 822 130 0 0 chr17 82392808 82392923 -7111630 + AluJb SINE Alu 3 117 -195 29 0 0 0 chr17 82392924 82392953 -7111600 + AT_rich Low_complexity Low_complexity 1 29 0 1118 187 0 0 chr17 82393057 82393260 -7111293 + AluJb SINE Alu 108 310 -2 878 107 15 0 chr17 82393519 82393650 -7110903 - AluJb SINE Alu -179 133 1 688 194 29 12 chr17 82394261 82394431 -7110122 + L1MB2 LINE L1 5991 6163 -8 541 239 94 0 chr17 82394475 82394655 -7109898 + HAL1b LINE L1 292 488 -860 1680 158 28 14 chr17 82394700 82394991 -7109562 + AluJo SINE Alu 1 295 -17 2224 115 0 0 chr17 82394993 82395305 -7109248 + AluSx SINE Alu 1 312 0 21 36 0 0 chr17 82395639 82395667 -7108886 + AT_rich Low_complexity Low_complexity 1 28 0 302 197 14 14 chr17 82395672 82395743 -7108810 + L1MDa LINE L1 2490 2560 -3980 2163 246 87 66 chr17 82395744 82396884 -7107669 + L1MC5 LINE L1 5903 7107 -854 1213 167 75 65 chr17 82396884 82397019 -7107534 + AluJb SINE Alu 1 133 -179 2161 118 0 0 chr17 82397019 82397315 -7107238 + AluSg SINE Alu 1 296 -14 1213 167 75 65 chr17 82397315 82397473 -7107080 + AluJb SINE Alu 133 297 -15 2163 246 87 66 chr17 82397473 82397872 -7106681 + L1MC5 LINE L1 7107 7496 -465 2376 132 52 54 chr17 82398052 82398418 -7106135 + L1MB5 LINE L1 5697 6063 -111 1928 112 45 3 chr17 82398418 82398705 -7105848 + AluSx SINE Alu 1 299 -13 2376 132 52 54 chr17 82398705 82398817 -7105736 + L1MB5 LINE L1 6063 6174 0 401 264 47 68 chr17 82398949 82399097 -7105456 - MIR SINE MIR -102 160 16 2367 64 0 0 chr17 82399234 82399531 -7105022 - AluY SINE Alu -14 297 1 2228 101 0 0 chr17 82399531 82399829 -7104724 - AluSx SINE Alu -14 298 1 1424 125 4 46 chr17 82400956 82401196 -7103357 + MER30 DNA MER1_type 1 230 0 25 0 0 0 chr17 82401205 82401230 -7103323 + AT_rich Low_complexity Low_complexity 1 25 0 2207 114 0 0 chr17 82401231 82401538 -7103015 + AluSx SINE Alu 1 307 -5 859 134 8 0 chr17 82401550 82401684 -7102869 + FLAM_C SINE Alu 6 140 -3 26 50 0 0 chr17 82401706 82401746 -7102807 + AT_rich Low_complexity Low_complexity 1 40 0 2207 100 0 16 chr17 82403451 82403762 -7100791 - AluSq SINE Alu -7 306 1 642 263 58 62 chr17 82403762 82403937 -7100616 - MIR SINE MIR -11 251 74 2261 67 3 10 chr17 82403937 82404237 -7100316 + AluSp SINE Alu 1 298 -15 642 263 58 62 chr17 82404237 82404309 -7100244 - MIR SINE MIR -188 74 3 2150 99 6 10 chr17 82404982 82405295 -7099258 + AluSx SINE Alu 1 312 0 210 216 0 0 chr17 82405297 82405334 -7099219 + (CCCA)n Simple_repeat Simple_repeat 3 39 0 506 306 60 27 chr17 82405649 82405832 -7098721 + MIR SINE MIR 48 236 -26 196 337 48 0 chr17 82406648 82406731 -7097822 + L2 LINE L2 2376 2462 -852 2200 109 0 0 chr17 82406899 82407201 -7097352 + AluSg SINE Alu 1 302 -8 387 60 0 0 chr17 82407201 82407251 -7097302 + (GA)n Simple_repeat Simple_repeat 1 50 0 846 185 0 0 chr17 82407275 82407421 -7097132 - AluJo/FRAM SINE Alu -7 305 160 1626 88 0 0 chr17 82407421 82407638 -7096915 - AluY SINE Alu -94 217 1 601 141 106 0 chr17 82407640 82407782 -7096771 - L1M4 LINE L1 -817 5329 5173 777 180 29 7 chr17 82407783 82407922 -7096631 - AluSq SINE Alu -158 155 14 320 127 0 113 chr17 82407922 82407993 -7096560 + FLAM_A SINE Alu 71 133 0 3666 190 45 52 chr17 82408105 82408442 -7096111 - L1ME1 LINE L1 -5 6161 5823 1755 141 3 28 chr17 82408442 82408762 -7095791 + AluJo SINE Alu 1 312 0 3666 190 45 52 chr17 82408762 82409268 -7095285 - L1ME1 LINE L1 -343 5823 5315 2095 109 0 0 chr17 82409268 82409561 -7094992 - AluY SINE Alu -18 293 1 3666 190 45 52 chr17 82409561 82409880 -7094673 - L1ME1 LINE L1 -851 5315 4998 1647 157 31 14 chr17 82409880 82410174 -7094379 - AluJo SINE Alu -13 299 1 4587 166 54 43 chr17 82410177 82411493 -7093060 - L1MB7 LINE L1 0 6184 4669 2436 54 0 3 chr17 82411541 82411839 -7092714 - AluY SINE Alu -14 297 1 1742 171 0 0 chr17 82412068 82412360 -7092193 + AluJo SINE Alu 1 292 -20 684 118 29 0 chr17 82412372 82412474 -7092079 + MLT2C1 LTR ERVL 104 208 -189 668 267 28 50 chr17 82412960 82413325 -7091228 + L1MC4a LINE L1 5646 6010 -281 348 247 0 0 chr17 82413977 82414050 -7090503 + MIR SINE MIR 72 144 -64 658 129 0 43 chr17 82414051 82414142 -7090411 + AluJo SINE Alu 40 127 -185 1968 119 0 16 chr17 82414142 82414445 -7090108 + AluSx SINE Alu 3 300 -12 658 129 0 43 chr17 82414445 82414469 -7090084 + AluJo SINE Alu 127 150 -162 25 31 0 0 chr17 82415519 82415551 -7089002 + AT_rich Low_complexity Low_complexity 1 32 0 51 94 0 0 chr17 82416598 82416747 -7087806 + GC_rich Low_complexity Low_complexity 1 149 0 23 0 0 0 chr17 82416801 82416824 -7087729 + GC_rich Low_complexity Low_complexity 1 23 0 185 164 0 18 chr17 82417015 82417070 -7087483 + G-rich Low_complexity Low_complexity 5 58 0 24 32 0 0 chr17 82417071 82417102 -7087451 + GC_rich Low_complexity Low_complexity 1 31 0 2000 87 56 0 chr17 82417943 82418231 -7086322 - AluSg SINE Alu -5 305 2 655 223 29 0 chr17 82418955 82419094 -7085459 - MIR SINE MIR -11 251 109 200 248 228 50 chr17 82419133 82419234 -7085319 + MIR SINE MIR 79 197 -65 2126 116 0 0 chr17 82419242 82419544 -7085009 - AluSx SINE Alu -10 302 1 1987 96 36 0 chr17 82421012 82421292 -7083261 + AluSc SINE Alu 1 290 -19 2237 86 0 3 chr17 82421610 82421912 -7082641 + AluSx SINE Alu 1 301 -11 854 157 0 27 chr17 82421939 82422086 -7082467 + AluJo SINE Alu 1 143 -169 2149 97 7 0 chr17 82422087 82422385 -7082168 + AluSg SINE Alu 1 300 -10 375 259 129 20 chr17 82422614 82422761 -7081792 - MIR3 SINE MIR -14 194 32 2179 95 7 0 chr17 82423497 82423792 -7080761 - AluSx SINE Alu -15 297 1 64 35 0 0 chr17 82423800 82423885 -7080668 + AT_rich Low_complexity Low_complexity 1 85 0 1961 131 0 16 chr17 82423889 82424201 -7080352 - AluSx SINE Alu -5 307 1 1825 140 0 56 chr17 82424518 82424840 -7079713 - AluJb SINE Alu -8 304 1 966 157 86 20 chr17 82425074 82425271 -7079282 + MER2 DNA MER2_type 1 210 -135 2143 129 0 0 chr17 82425275 82425586 -7078967 - AluSx SINE Alu -1 311 1 322 274 41 0 chr17 82425586 82425659 -7078894 + MER2 DNA MER2_type 269 344 -1 448 291 131 19 chr17 82425667 82425873 -7078680 + MIR SINE MIR 31 259 -3 2200 108 0 0 chr17 82425896 82426203 -7078350 + AluSx SINE Alu 1 307 -5 2195 74 0 11 chr17 82426249 82426555 -7077998 + AluY SINE Alu 1 303 0 1591 133 82 0 chr17 82426965 82427235 -7077318 - AluJb SINE Alu -20 292 1 231 69 0 0 chr17 82427330 82427359 -7077194 - MER63 DNA MER1_type -54 1008 980 341 247 129 0 chr17 82427369 82427462 -7077091 - MER63 DNA MER1_type -331 731 1 2099 109 0 0 chr17 82427546 82427851 -7076702 - AluSx SINE Alu 0 305 1 611 136 0 0 chr17 82427902 82427990 -7076563 - FRAM SINE Alu -47 129 42 445 142 57 94 chr17 82427990 82428096 -7076457 - MIR SINE MIR -73 189 88 202 278 0 0 chr17 82428983 82429037 -7075516 + CT-rich Low_complexity Low_complexity 2 55 0 1998 125 3 3 chr17 82429178 82429473 -7075080 - AluSq SINE Alu -18 295 1 251 143 0 18 chr17 82430029 82430085 -7074468 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 313 338 86 25 chr17 82430468 82430666 -7073887 + MIR SINE MIR 41 250 -12 1994 91 59 0 chr17 82484110 82484397 -7020156 - AluSg SINE Alu -5 305 2 619 229 26 20 chr17 82485107 82485260 -7019293 - MIR SINE MIR 0 262 109 193 282 200 36 chr17 82485290 82485400 -7019153 + MIR SINE MIR 70 197 -65 2189 118 0 0 chr17 82485406 82485710 -7018843 - AluSx SINE Alu -8 304 1 1520 98 9 0 chr17 82487291 82487506 -7017047 - AluY SINE Alu -94 217 1 601 141 106 0 chr17 82487508 82487650 -7016903 - L1M4 LINE L1 -817 5329 5173 738 181 36 7 chr17 82487651 82487789 -7016764 - AluSq SINE Alu -158 155 14 320 127 0 113 chr17 82487789 82487860 -7016693 + FLAM_A SINE Alu 71 133 0 3666 190 45 52 chr17 82487972 82488309 -7016244 - L1ME1 LINE L1 -5 6161 5823 1755 141 3 28 chr17 82488309 82488629 -7015924 + AluJo SINE Alu 1 312 0 3666 190 45 52 chr17 82488629 82489135 -7015418 - L1ME1 LINE L1 -343 5823 5315 2095 109 0 0 chr17 82489135 82489428 -7015125 - AluY SINE Alu -18 293 1 3666 190 45 52 chr17 82489428 82489747 -7014806 - L1ME1 LINE L1 -851 5315 4998 1647 157 31 14 chr17 82489747 82490041 -7014512 - AluJo SINE Alu -13 299 1 4605 166 54 43 chr17 82490044 82491360 -7013193 - L1MB7 LINE L1 0 6184 4669 2436 54 0 3 chr17 82491408 82491706 -7012847 - AluY SINE Alu -14 297 1 1742 171 0 0 chr17 82491935 82492227 -7012326 + AluJo SINE Alu 1 292 -20 684 118 29 0 chr17 82492239 82492341 -7012212 + MLT2C1 LTR ERVL 104 208 -189 668 267 28 50 chr17 82492827 82493192 -7011361 + L1MC4a LINE L1 5646 6010 -281 348 247 0 0 chr17 82493844 82493917 -7010636 + MIR SINE MIR 72 144 -64 621 130 9 43 chr17 82493918 82494008 -7010545 + AluJo SINE Alu 40 127 -185 1955 122 0 16 chr17 82494008 82494311 -7010242 + AluSx SINE Alu 3 300 -12 621 130 9 43 chr17 82494311 82494335 -7010218 + AluJo SINE Alu 127 150 -162 25 31 0 0 chr17 82495385 82495417 -7009136 + AT_rich Low_complexity Low_complexity 1 32 0 4369 163 52 51 chr17 82496658 82496735 -7007818 + MER21B LTR ERV1 1 76 -787 2134 101 7 0 chr17 82496735 82497033 -7007520 + AluSx SINE Alu 1 300 -12 4369 163 52 51 chr17 82497033 82497797 -7006756 + MER21B LTR ERV1 76 843 -20 1516 164 6 91 chr17 82498607 82499002 -7005551 + AluJo SINE Alu 1 366 0 822 130 0 0 chr17 82499912 82500027 -7004526 + AluJb SINE Alu 3 117 -195 29 0 0 0 chr17 82500028 82500057 -7004496 + AT_rich Low_complexity Low_complexity 1 29 0 1118 187 0 0 chr17 82500161 82500364 -7004189 + AluJb SINE Alu 108 310 -2 878 107 15 0 chr17 82500623 82500754 -7003799 - AluJb SINE Alu -179 133 1 688 194 29 12 chr17 82501365 82501535 -7003018 + L1MB2 LINE L1 5991 6163 -8 541 239 94 0 chr17 82501579 82501759 -7002794 + HAL1b LINE L1 292 488 -860 1680 158 28 14 chr17 82501804 82502095 -7002458 + AluJo SINE Alu 1 295 -17 2224 115 0 0 chr17 82502097 82502409 -7002144 + AluSx SINE Alu 1 312 0 21 36 0 0 chr17 82502743 82502771 -7001782 + AT_rich Low_complexity Low_complexity 1 28 0 302 197 14 14 chr17 82502776 82502847 -7001706 + L1MDa LINE L1 2490 2560 -3980 2157 246 86 67 chr17 82502848 82503989 -7000564 + L1MC5 LINE L1 5903 7106 -855 1213 167 75 65 chr17 82503989 82504124 -7000429 + AluJb SINE Alu 1 133 -179 2161 118 0 0 chr17 82504124 82504420 -7000133 + AluSg SINE Alu 1 296 -14 1213 167 75 65 chr17 82504420 82504578 -6999975 + AluJb SINE Alu 133 297 -15 2157 246 86 67 chr17 82504578 82504977 -6999576 + L1MC5 LINE L1 7106 7496 -465 2376 132 52 54 chr17 82505157 82505523 -6999030 + L1MB5 LINE L1 5697 6063 -111 1928 112 45 3 chr17 82505523 82505810 -6998743 + AluSx SINE Alu 1 299 -13 2376 132 52 54 chr17 82505810 82505922 -6998631 + L1MB5 LINE L1 6063 6174 0 389 270 47 68 chr17 82506054 82506202 -6998351 - MIR SINE MIR -102 160 16 2367 64 0 0 chr17 82506339 82506636 -6997917 - AluY SINE Alu -14 297 1 2228 101 0 0 chr17 82506636 82506934 -6997619 - AluSx SINE Alu -14 298 1 1424 125 4 46 chr17 82508059 82508299 -6996254 + MER30 DNA MER1_type 1 230 0 25 0 0 0 chr17 82508308 82508333 -6996220 + AT_rich Low_complexity Low_complexity 1 25 0 2207 114 0 0 chr17 82508334 82508641 -6995912 + AluSx SINE Alu 1 307 -5 859 134 8 0 chr17 82508653 82508787 -6995766 + FLAM_C SINE Alu 6 140 -3 26 50 0 0 chr17 82508809 82508849 -6995704 + AT_rich Low_complexity Low_complexity 1 40 0 2207 100 0 16 chr17 82510553 82510864 -6993689 - AluSq SINE Alu -7 306 1 642 263 58 62 chr17 82510864 82511039 -6993514 - MIR SINE MIR -11 251 74 2190 70 7 10 chr17 82511039 82511338 -6993215 + AluSp SINE Alu 1 298 -15 642 263 58 62 chr17 82511338 82511410 -6993143 - MIR SINE MIR -188 74 3 2150 99 6 10 chr17 82512083 82512396 -6992157 + AluSx SINE Alu 1 312 0 210 216 0 0 chr17 82512398 82512435 -6992118 + (CCCA)n Simple_repeat Simple_repeat 3 39 0 493 319 60 22 chr17 82512750 82512932 -6991621 + MIR SINE MIR 48 236 -26 196 337 48 0 chr17 82513748 82513831 -6990722 + L2 LINE L2 2376 2462 -852 2200 109 0 0 chr17 82513999 82514301 -6990252 + AluSg SINE Alu 1 302 -8 237 65 0 0 chr17 82514301 82514332 -6990221 + (GA)n Simple_repeat Simple_repeat 1 31 0 1309 180 31 42 chr17 82514454 82514592 -6989961 - AluJo SINE Alu -26 286 148 1934 113 33 7 chr17 82514592 82514892 -6989661 - AluSx SINE Alu -4 308 1 2376 47 17 3 chr17 82514902 82515199 -6989354 - AluY SINE Alu -10 301 1 1309 180 31 42 chr17 82515199 82515338 -6989215 - AluJo SINE Alu -173 139 1 2305 84 0 0 chr17 82515340 82515636 -6988917 - AluSx SINE Alu -16 296 1 2112 96 7 0 chr17 82516174 82516465 -6988088 + AluSx SINE Alu 1 293 -19 2230 64 0 20 chr17 82516552 82516849 -6987704 - AluSc SINE Alu -18 291 1 1454 151 42 35 chr17 82517366 82517489 -6987064 + AluJb SINE Alu 1 122 -190 2189 90 0 7 chr17 82517489 82517778 -6986775 + AluSx SINE Alu 1 287 -25 1454 151 42 35 chr17 82517778 82517939 -6986614 + AluJb SINE Alu 122 287 -25 1806 136 11 0 chr17 82518006 82518293 -6986260 + AluJb SINE Alu 1 290 -22 345 182 0 152 chr17 82518323 82518422 -6986131 + HsTC2 DNA Tc2 7 90 -1808 1222 109 0 0 chr17 82518422 82518597 -6985956 - AluSg/x SINE Alu -7 303 129 252 0 0 0 chr17 82518597 82518625 -6985928 + (TG)n Simple_repeat Simple_repeat 1 28 0 1940 108 11 0 chr17 82518625 82518903 -6985650 - AluSx SINE Alu -31 281 1 433 209 35 0 chr17 82519099 82519185 -6985368 + MLT1D LTR MaLR 1 89 -416 1955 209 34 10 chr17 82519286 82519697 -6984856 + LTR22 LTR ERVK 85 505 -4 1472 118 9 0 chr17 82519716 82519927 -6984626 - AluSx SINE Alu -99 213 1 922 193 69 0 chr17 82520177 82520379 -6984174 + MER20 DNA MER1_type 4 219 0 2110 116 7 7 chr17 82520594 82520904 -6983649 - AluSx SINE Alu -2 310 1 448 291 131 19 chr17 82520986 82521192 -6983361 + MIR SINE MIR 31 259 -3 2200 108 0 0 chr17 82521215 82521522 -6983031 + AluSx SINE Alu 1 307 -5 2195 74 0 11 chr17 82521568 82521874 -6982679 + AluY SINE Alu 1 303 0 1591 133 82 0 chr17 82522284 82522554 -6981999 - AluJb SINE Alu -20 292 1 231 69 0 0 chr17 82522649 82522678 -6981875 - MER63 DNA MER1_type -54 1008 980 341 247 129 0 chr17 82522688 82522781 -6981772 - MER63 DNA MER1_type -331 731 1 2099 109 0 0 chr17 82522865 82523170 -6981383 - AluSx SINE Alu 0 305 1 611 136 0 0 chr17 82523221 82523309 -6981244 - FRAM SINE Alu -47 129 42 445 142 57 94 chr17 82523309 82523415 -6981138 - MIR SINE MIR -73 189 88 202 278 0 0 chr17 82524302 82524356 -6980197 + CT-rich Low_complexity Low_complexity 2 55 0 2007 125 3 3 chr17 82524497 82524793 -6979760 - AluSq SINE Alu -17 296 1 973 157 13 0 chr17 82525004 82525163 -6979390 - Tigger3(Golem) DNA MER2_type -1 3028 2868 2188 92 3 0 chr17 82525374 82525666 -6978887 - AluSq SINE Alu -20 293 1 2390 73 0 6 chr17 82526086 82526401 -6978152 - AluSp SINE Alu 0 313 1 1668 123 0 15 chr17 82526480 82526740 -6977813 + AluSx SINE Alu 56 311 -1 2360 74 0 0 chr17 82527351 82527649 -6976904 + AluSg SINE Alu 5 302 -8 1558 162 48 57 chr17 82528848 82529182 -6975371 + MLT1D LTR MaLR 1 331 -174 642 49 24 0 chr17 82529228 82529310 -6975243 - AluSg/x SINE Alu -12 300 217 2005 77 4 0 chr17 82529310 82529569 -6974984 - AluSx SINE Alu -52 260 1 2074 105 0 7 chr17 82529571 82529865 -6974688 - AluSx SINE Alu -20 292 1 285 72 391 0 chr17 82529920 82529989 -6974564 + MLT1D LTR MaLR 409 504 -1 1757 159 0 19 chr17 82530300 82530608 -6973945 + AluJo SINE Alu 1 302 -10 897 197 67 5 chr17 82530724 82530932 -6973621 + MLT1C LTR MaLR 203 423 -44 1826 95 18 7 chr17 82531350 82531624 -6972929 + AluSx SINE Alu 35 311 -1 876 171 214 24 chr17 82531863 82532073 -6972480 - MER2 DNA MER2_type -95 250 1 2076 105 0 36 chr17 82532228 82532534 -6972019 - AluSx SINE Alu -17 295 1 1017 108 0 0 chr17 82532568 82532707 -6971846 - AluSq/x SINE Alu -173 139 1 1757 147 0 14 chr17 82532709 82533002 -6971551 - AluJo SINE Alu -18 294 6 24 32 0 0 chr17 82533007 82533038 -6971515 + AT_rich Low_complexity Low_complexity 1 31 0 1183 155 132 85 chr17 82534319 82534396 -6970157 - MER47A DNA MER2_type -1966 357 285 2044 106 14 3 chr17 82534396 82534689 -6969864 + AluSx SINE Alu 1 296 -16 1183 155 132 85 chr17 82534689 82534952 -6969601 - MER47A DNA MER2_type -2038 285 1 967 184 90 50 chr17 82536294 82536439 -6968114 - MER33 DNA MER1_type -2261 324 186 270 0 0 0 chr17 82536439 82536469 -6968084 + (TATG)n Simple_repeat Simple_repeat 2 31 0 2259 81 11 0 chr17 82536469 82536754 -6967799 - AluSp SINE Alu -25 288 1 967 184 90 50 chr17 82536754 82536784 -6967769 - MER33 DNA MER1_type -2399 186 159 731 179 41 0 chr17 82536784 82536907 -6967646 - FLAM_C SINE Alu -5 128 1 967 184 90 50 chr17 82536907 82537007 -6967546 - MER33 DNA MER1_type -2426 159 36 1672 88 0 9 chr17 82537940 82538167 -6966386 - AluSg/x SINE Alu 0 310 86 1964 113 7 0 chr17 82538170 82538444 -6966109 + AluSx SINE Alu 37 312 0 2037 110 55 0 chr17 82539320 82539610 -6964943 + AluSx SINE Alu 1 306 -6 1112 133 6 0 chr17 82539615 82539780 -6964773 + AluSg/x SINE Alu 136 301 -11 746 209 115 11 chr17 82540192 82540383 -6964170 - MER20 DNA MER1_type -2 217 7 2050 110 7 7 chr17 82540406 82540698 -6963855 + AluSg SINE Alu 1 292 -18 2386 86 0 0 chr17 82541173 82541476 -6963077 - AluSg SINE Alu -7 303 1 260 105 0 88 chr17 82541557 82541614 -6962939 + L1MC4 LINE L1 6750 6801 -1241 514 167 0 22 chr17 82541615 82541705 -6962848 + HY4 scRNA scRNA 2 89 -4 2061 88 49 0 chr17 82541706 82541991 -6962562 - AluSg SINE Alu -11 299 1 863 194 47 5 chr17 82542012 82542223 -6962330 + L1MC4 LINE L1 6788 7007 -1035 1740 163 40 0 chr17 82542226 82542526 -6962027 + AluSx SINE Alu 1 312 0 370 157 24 12 chr17 82542526 82542609 -6961944 + GA-rich Low_complexity Low_complexity 3 86 0 280 170 0 0 chr17 82542609 82542662 -6961891 + Tigger1 DNA MER2_type 1 53 -2365 1223 127 0 0 chr17 82542662 82542835 -6961718 - AluSg/x SINE Alu -11 299 127 815 157 58 12 chr17 82542939 82543111 -6961442 - AluJb SINE Alu -132 180 1 4182 141 209 118 chr17 82543113 82543311 -6961242 + Tigger1 DNA MER2_type 105 283 -2135 1495 95 66 0 chr17 82543311 82543522 -6961031 + AluSg SINE Alu 9 233 -77 4182 141 209 118 chr17 82543522 82544143 -6960410 + Tigger1 DNA MER2_type 283 846 -1572 2149 111 3 0 chr17 82544143 82544431 -6960122 + AluSx SINE Alu 1 289 -23 4182 141 209 118 chr17 82544431 82544630 -6959923 + Tigger1 DNA MER2_type 846 1025 -1393 576 184 0 19 chr17 82544630 82544733 -6959820 + AluJo SINE Alu 44 144 -168 1684 154 0 32 chr17 82544736 82545021 -6959532 + AluJb SINE Alu 5 280 -32 4182 141 209 118 chr17 82545021 82545088 -6959465 + Tigger1 DNA MER2_type 1026 1085 -1333 2141 124 0 0 chr17 82545088 82545386 -6959167 + AluSx SINE Alu 1 298 -14 4182 141 209 118 chr17 82545386 82545892 -6958661 + Tigger1 DNA MER2_type 1085 1543 -875 2186 95 17 0 chr17 82545892 82546188 -6958365 + AluSx SINE Alu 1 301 -11 4182 141 209 118 chr17 82546188 82546228 -6958325 + Tigger1 DNA MER2_type 1543 2006 -412 476 231 0 0 chr17 82546224 82546328 -6958225 + U13 snRNA snRNA 1 104 0 * 553 93 74 65 chr17 82546334 82546345 -6958208 + Tigger1 DNA MER2_type 1985 1994 -424 2098 111 0 10 chr17 82546345 82546643 -6957910 + AluSq SINE Alu 1 295 -18 553 93 74 65 chr17 82546643 82546737 -6957816 + Tigger1 DNA MER2_type 1994 2091 -327 339 226 0 123 chr17 82546737 82546808 -6957745 + FLAM_A SINE Alu 1 56 -246 2198 92 9 22 chr17 82546808 82547123 -6957430 + AluY SINE Alu 1 311 0 339 226 0 123 chr17 82547123 82547157 -6957396 + FLAM_A SINE Alu 56 93 -209 2490 49 0 10 chr17 82547158 82547464 -6957089 + AluY SINE Alu 3 305 -6 22 0 0 0 chr17 82547746 82547768 -6956785 + AT_rich Low_complexity Low_complexity 1 22 0 835 148 7 52 chr17 82548247 82548402 -6956151 - AluJo SINE Alu -164 148 1 2082 136 0 0 chr17 82548487 82548789 -6955764 + AluSq SINE Alu 1 302 -11 1226 104 38 6 chr17 82548794 82548977 -6955576 - AluSg/x SINE Alu -39 271 83 914 153 25 0 chr17 82549875 82550032 -6954521 + AluJb SINE Alu 130 290 -22 1433 131 36 0 chr17 82550061 82550283 -6954270 - AluSg/x SINE Alu -14 296 67 1172 130 117 135 chr17 82550285 82550523 -6954030 - pTR5 LTR ERV1 -2044 394 29 231 226 0 0 chr17 82550523 82550576 -6953977 - LTR30 LTR ERV1 -126 596 544 6148 122 66 66 chr17 82550576 82551856 -6952697 - pTR5 LTR ERV1 -413 2025 747 763 196 6 75 chr17 82551856 82552029 -6952524 - AluJo SINE Alu -108 204 44 442 260 94 0 chr17 82552030 82552157 -6952396 - HAL1 LINE L1 -175 2332 2194 741 210 42 0 chr17 82552222 82552365 -6952188 + AluJb SINE Alu 148 296 -16 2299 94 13 0 chr17 82552645 82552952 -6951601 + AluSx SINE Alu 2 312 0 524 268 26 98 chr17 82553294 82553495 -6951058 + MIR SINE MIR 3 182 -80 843 176 0 0 chr17 82553495 82553626 -6950927 + FLAM_C SINE Alu 1 131 -2 524 268 26 98 chr17 82553626 82553689 -6950864 + MIR SINE MIR 182 248 -14 1315 158 114 22 chr17 82553803 82554076 -6950477 + AluJo SINE Alu 1 298 -14 1865 148 10 3 chr17 82554078 82554376 -6950177 + AluSx SINE Alu 1 300 -12 242 146 0 36 chr17 82554689 82554744 -6949809 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 2095 100 0 55 chr17 82554964 82555294 -6949259 - AluSx SINE Alu 0 312 1 317 233 144 55 chr17 82555571 82555717 -6948836 + MIR SINE MIR 103 261 -1 2065 77 0 0 chr17 82555918 82556177 -6948376 - AluY SINE Alu -17 294 36 1490 147 60 4 chr17 82557463 82557695 -6946858 + AluJo SINE Alu 1 245 -67 772 172 0 8 chr17 82557783 82557917 -6946636 - FLAM_C SINE Alu 0 143 11 483 222 149 7 chr17 82558201 82558375 -6946178 + L1ME3A LINE L1 5970 6165 -1 27 49 0 0 chr17 82558998 82559039 -6945514 + GC_rich Low_complexity Low_complexity 1 41 0 29 98 0 0 chr17 82559057 82559149 -6945404 + GC_rich Low_complexity Low_complexity 1 92 0 213 98 0 59 chr17 82559286 82559337 -6945216 + (CGGGGG)n Simple_repeat Simple_repeat 6 53 0 24 32 0 0 chr17 82559442 82559473 -6945080 + GC_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr17 82559617 82559650 -6944903 + GC_rich Low_complexity Low_complexity 1 33 0 799 128 0 83 chr17 82561181 82561337 -6943216 - FLAM_C SINE Alu 0 143 1 2070 80 53 30 chr17 82561342 82561642 -6942911 - AluSp SINE Alu -6 307 1 330 245 71 10 chr17 82561893 82561991 -6942562 - MIR3 SINE MIR -23 185 82 2255 92 0 13 chr17 82562415 82562720 -6941833 - AluSx SINE Alu -11 301 1 330 253 77 82 chr17 82563163 82563345 -6941208 + MIR SINE MIR 2 182 -80 22 70 0 0 chr17 82564403 82564446 -6940107 + AT_rich Low_complexity Low_complexity 1 43 0 770 274 40 5 chr17 82568425 82568648 -6935905 + MIR SINE MIR 23 253 -9 252 204 20 171 chr17 82568899 82569051 -6935502 - MIR3 SINE MIR -50 158 30 200 220 60 0 chr17 82569266 82569316 -6935237 + MIR SINE MIR 111 163 -99 565 211 0 26 chr17 82571212 82571527 -6933026 + (CA)n Simple_repeat Simple_repeat 1 306 0 830 140 0 37 chr17 82574750 82574886 -6929667 + FLAM_C SINE Alu 1 131 -2 2279 92 3 0 chr17 82577282 82577575 -6926978 + AluSq SINE Alu 1 294 -19 2024 141 0 7 chr17 82577575 82577878 -6926675 + AluSx SINE Alu 1 302 -10 1004 156 0 64 chr17 82578023 82578219 -6926334 + L1M4 LINE L1 5178 5353 -831 2270 97 3 3 chr17 82578219 82578528 -6926025 + AluSg SINE Alu 1 309 -1 1004 156 0 64 chr17 82578528 82578642 -6925911 + L1M4 LINE L1 5353 5473 -711 1136 112 12 0 chr17 82578642 82578803 -6925750 - AluSg/x SINE Alu -15 295 133 2080 97 3 7 chr17 82578803 82579116 -6925437 - AluSx SINE Alu 0 312 1 552 159 131 0 chr17 82579395 82579502 -6925051 + FLAM_A SINE Alu 20 140 -2 1966 134 7 0 chr17 82579668 82579958 -6924595 - AluSx SINE Alu -15 297 6 2067 123 3 16 chr17 82579975 82580291 -6924262 - AluSx SINE Alu 0 312 1 219 88 0 0 chr17 82580291 82580325 -6924228 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 2080 92 3 3 chr17 82580325 82580607 -6923946 - AluSg SINE Alu -28 282 1 897 183 89 0 chr17 82580613 82580782 -6923771 - FAM SINE Alu -1 48 1 335 306 0 0 chr17 82580782 82580893 -6923660 - L1ME4a LINE L1 -287 5834 5724 1720 185 67 17 chr17 82581171 82581527 -6923026 - MLT1A2 LTR MaLR 0 374 1 2642 62 2 142 chr17 82581603 82582041 -6922512 - MER51B LTR ERV1 0 377 1 1623 170 37 37 chr17 82582073 82582226 -6922327 - AluSx SINE Alu -2 300 148 1368 176 0 94 chr17 82582226 82582392 -6922161 - AluJb SINE Alu -13 299 178 2195 90 7 0 chr17 82582392 82582681 -6921872 - AluSc SINE Alu -18 291 1 1368 176 0 94 chr17 82582681 82582844 -6921709 - AluJb SINE Alu -134 178 1 339 25 0 0 chr17 82582847 82582887 -6921666 + (TG)n Simple_repeat Simple_repeat 1 40 0 1887 103 0 73 chr17 82582892 82583049 -6921504 - AluSg SINE Alu -30 280 154 2439 49 0 20 chr17 82583049 82583354 -6921199 - AluY SINE Alu -12 299 1 1887 103 0 73 chr17 82583354 82583498 -6921055 - AluSg SINE Alu -156 154 1 1623 170 37 37 chr17 82583498 82583634 -6920919 - AluSx SINE Alu -159 143 1 951 129 7 0 chr17 82583635 82583774 -6920779 - AluSq/x SINE Alu -167 145 6 189 0 0 0 chr17 82583886 82583907 -6920646 + (T)n Simple_repeat Simple_repeat 1 21 0 892 155 5 48 chr17 82584259 82584446 -6920107 + AluJb SINE Alu 134 312 0 189 0 0 0 chr17 82585096 82585117 -6919436 + (A)n Simple_repeat Simple_repeat 1 21 0 1455 200 30 7 chr17 82585127 82585432 -6919121 + AluSx SINE Alu 1 312 0 873 142 0 0 chr17 82585449 82585576 -6918977 + FRAM SINE Alu 24 150 -26 2470 268 16 69 chr17 82585596 82585779 -6918774 - L1MEc LINE L1 -5451 945 754 2267 98 0 0 chr17 82585779 82586084 -6918469 - AluSx SINE Alu -7 305 1 2470 268 16 69 chr17 82586084 82586500 -6918053 - L1MEc LINE L1 -5642 754 317 1976 143 30 0 chr17 82586500 82586801 -6917752 - AluSx SINE Alu 0 312 3 2470 268 16 69 chr17 82586801 82587070 -6917483 - L1MEc LINE L1 -6079 317 118 2216 102 0 0 chr17 82587070 82587365 -6917188 - AluSg SINE Alu -15 295 1 2470 268 16 69 chr17 82587365 82587443 -6917110 - L1MEc LINE L1 -6278 118 37 1884 130 45 3 chr17 82587643 82587935 -6916618 - AluSx SINE Alu -8 304 1 1868 114 33 4 chr17 82588018 82588199 -6916354 - AluSc SINE Alu 0 310 116 360 64 0 0 chr17 82588199 82588246 -6916307 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1868 114 33 4 chr17 82588246 82588366 -6916187 - AluSc SINE Alu -194 116 1 2224 114 0 0 chr17 82588487 82588785 -6915768 - AluSx SINE Alu -14 298 1 1773 130 23 0 chr17 82588873 82589134 -6915419 - AluSq SINE Alu -7 306 40 382 401 0 0 chr17 82590349 82590521 -6914032 + (GCCTG)n Simple_repeat Simple_repeat 4 175 0 222 393 0 0 chr17 82590942 82591049 -6913504 + (CAGTG)n Simple_repeat Simple_repeat 2 108 0 * 344 402 0 0 chr17 82590970 82591144 -6913409 + (GTTTG)n Simple_repeat Simple_repeat 4 177 0 254 439 0 0 chr17 82591132 82591303 -6913250 + (GCCTG)n Simple_repeat Simple_repeat 5 175 0 * 1643 161 10 20 chr17 82592631 82592929 -6911624 + AluJb SINE Alu 1 295 -17 2076 98 3 44 chr17 82593344 82593660 -6910893 - AluSp SINE Alu -10 303 1 1989 135 7 0 chr17 82593829 82594117 -6910436 + AluJo SINE Alu 1 290 -22 2503 71 0 0 chr17 82594182 82594493 -6910060 - AluY SINE Alu 0 311 1 2118 112 0 10 chr17 82594589 82594893 -6909660 - AluSx SINE Alu -11 301 1 2183 96 3 6 chr17 82594903 82595215 -6909338 - AluSx SINE Alu -1 311 1 421 17 35 0 chr17 82596227 82596285 -6908268 + (TG)n Simple_repeat Simple_repeat 1 60 0 1623 113 0 0 chr17 82596419 82596648 -6907905 - AluSq SINE Alu -9 304 76 2675 164 30 2 chr17 82596656 82597127 -6907426 - L1MB7 LINE L1 -15 6169 5686 2317 68 0 10 chr17 82597129 82597425 -6907128 - AluY SINE Alu -18 293 1 1943 113 3 3 chr17 82597436 82597719 -6906834 - AluSq SINE Alu 0 313 31 971 117 0 0 chr17 82597748 82597885 -6906668 + AluSq/x SINE Alu 1 137 -175 941 232 29 24 chr17 82598511 82598937 -6905616 + MLT1D LTR MaLR 1 504 -1 2054 120 0 3 chr17 82598999 82599299 -6905254 - AluSq SINE Alu -14 299 1 2434 52 0 10 chr17 82599704 82600009 -6904544 + AluY SINE Alu 1 302 -9 516 300 9 43 chr17 82600130 82600340 -6904213 + L1MC/D LINE L1 5414 5616 -2192 348 200 0 0 chr17 82601098 82601188 -6903365 + (CA)n Simple_repeat Simple_repeat 2 91 0 1855 157 3 10 chr17 82601267 82601573 -6902980 - AluJo SINE Alu 0 312 9 22 35 0 0 chr17 82601909 82601938 -6902615 + AT_rich Low_complexity Low_complexity 1 29 0 2088 124 3 10 chr17 82602003 82602317 -6902236 + AluSx SINE Alu 1 312 0 2084 89 4 4 chr17 82602730 82603011 -6901542 + AluSx SINE Alu 15 295 -17 21 0 0 0 chr17 82604128 82604149 -6900404 + GC_rich Low_complexity Low_complexity 1 21 0 804 189 0 7 chr17 82604857 82605005 -6899548 - AluSg/x SINE Alu -14 296 150 207 317 25 17 chr17 82605117 82605237 -6899316 + CT-rich Low_complexity Low_complexity 3 123 0 1216 126 5 11 chr17 82605388 82605579 -6898974 - AluSg SINE Alu -120 190 1 1961 115 3 20 chr17 82605678 82605973 -6898580 + AluSx SINE Alu 15 304 -8 1813 111 61 37 chr17 82606421 82606718 -6897835 - AluSp SINE Alu -9 304 1 303 161 0 16 chr17 82607001 82607063 -6897490 - MER50 LTR ERV1 -178 556 496 207 267 0 0 chr17 82607799 82607844 -6896709 + GA-rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr17 82608448 82608486 -6896067 + GC_rich Low_complexity Low_complexity 1 38 0 2035 108 7 20 chr17 82613167 82613472 -6891081 + AluJb SINE Alu 1 301 -11 1638 121 4 0 chr17 82613574 82613806 -6890747 - AluSx SINE Alu -77 235 3 189 0 0 0 chr17 82614425 82614446 -6890107 + (A)n Simple_repeat Simple_repeat 1 21 0 471 153 0 0 chr17 82617223 82617295 -6887258 - AluJb SINE Alu -18 294 223 892 137 7 0 chr17 82617295 82617434 -6887119 - AluJb SINE Alu -128 184 45 1500 96 5 0 chr17 82617583 82617814 -6886739 + AluSg/x SINE Alu 84 315 0 312 120 0 0 chr17 82617986 82618036 -6886517 + (TTCA)n Simple_repeat Simple_repeat 1 50 0 825 200 0 0 chr17 82618037 82618187 -6886366 - AluJo SINE Alu -25 287 138 190 245 75 0 chr17 82619039 82619092 -6885461 - L2 LINE L2 -2 3311 3255 856 149 0 22 chr17 82619242 82619376 -6885177 - AluJo SINE Alu -169 133 3 2207 107 3 7 chr17 82619476 82619784 -6884769 - AluSq SINE Alu -4 309 3 1551 182 39 29 chr17 82619834 82620142 -6884411 + AluJo SINE Alu 1 311 -1 1993 108 31 0 chr17 82620294 82620581 -6883972 + AluSx SINE Alu 1 296 -16 6060 77 20 46 chr17 82620730 82622116 -6882437 + SVA Other Other 433 1426 0 180 0 0 0 chr17 82622192 82622212 -6882341 + (A)n Simple_repeat Simple_repeat 1 20 0 1176 129 0 0 chr17 82622687 82622865 -6881688 + AluSg/x SINE Alu 121 298 -14 2941 112 24 44 chr17 82622865 82623371 -6881182 + Tigger1 DNA MER2_type 1471 1967 -451 2253 90 7 0 chr17 82623371 82623671 -6880882 + AluSx SINE Alu 1 302 -10 2941 112 24 44 chr17 82623671 82623711 -6880842 + Tigger1 DNA MER2_type 1967 2006 -412 512 231 0 0 chr17 82623707 82623811 -6880742 + U13 snRNA snRNA 1 104 0 * 569 94 75 66 chr17 82623817 82623828 -6880725 + Tigger1 DNA MER2_type 1985 1994 -424 2075 98 7 17 chr17 82623828 82624124 -6880429 + AluSq SINE Alu 1 293 -20 569 94 75 66 chr17 82624124 82624218 -6880335 + Tigger1 DNA MER2_type 1994 2091 -327 527 204 0 121 chr17 82624218 82624289 -6880264 + FLAM_A SINE Alu 1 79 -232 2206 86 9 22 chr17 82624289 82624604 -6879949 + AluY SINE Alu 1 311 0 527 204 0 121 chr17 82624604 82624639 -6879914 + FLAM_A SINE Alu 79 85 -226 2466 58 0 10 chr17 82624639 82624949 -6879604 + AluY SINE Alu 3 309 -2 527 204 0 121 chr17 82624949 82624998 -6879555 + FLAM_A SINE Alu 85 138 -173 1669 145 68 34 chr17 82624998 82625108 -6879445 + Tigger1 DNA MER2_type 2084 2189 -229 2126 84 3 29 chr17 82625108 82625416 -6879137 - AluY SINE Alu -11 300 1 1669 145 68 34 chr17 82625416 82625629 -6878924 + Tigger1 DNA MER2_type 2189 2418 0 3453 186 136 23 chr17 82625629 82626557 -6877996 + L1MC4 LINE L1 7010 8042 0 2011 138 3 0 chr17 82626575 82626880 -6877673 + AluSx SINE Alu 1 306 -6 2195 108 0 0 chr17 82626882 82627188 -6877365 + AluSc SINE Alu 1 306 -3 1297 190 39 77 chr17 82627402 82627712 -6876841 + AluJo SINE Alu 1 298 -4 2081 113 0 52 chr17 82627818 82628145 -6876408 + AluSx SINE Alu 1 310 -2 1884 114 31 3 chr17 82628583 82628873 -6875680 - AluJo SINE Alu -14 298 1 2126 121 0 3 chr17 82628962 82629267 -6875286 + AluSx SINE Alu 1 304 -8 1273 185 79 76 chr17 82630859 82631200 -6873353 - MER2 DNA MER2_type 0 344 3 1929 38 8 4 chr17 82632402 82632640 -6871913 - AluY SINE Alu -12 299 61 886 175 0 0 chr17 82632640 82632783 -6871770 - AluSg/x SINE Alu -32 280 138 1632 152 33 0 chr17 82633329 82633599 -6870954 + AluSx SINE Alu 17 295 -17 2365 74 7 3 chr17 82633599 82633908 -6870645 + AluSp SINE Alu 1 310 -3 779 130 23 23 chr17 82634233 82634364 -6870189 - FLAM_C SINE Alu 0 133 3 899 48 0 0 chr17 82634464 82634568 -6869985 + U6 snRNA snRNA 1 104 -3 234 0 0 0 chr17 82634572 82634598 -6869955 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1915 115 7 30 chr17 82634749 82635053 -6869500 - AluSg SINE Alu -13 297 1 618 332 70 11 chr17 82635197 82635483 -6869070 + MARNA DNA Mariner 259 561 -25 2062 127 0 0 chr17 82635569 82635895 -6868658 + AluSx SINE Alu 1 326 0 2037 115 7 0 chr17 82635900 82636188 -6868365 + AluSq SINE Alu 1 290 -23 189 0 0 0 chr17 82636188 82636209 -6868344 + (TTAAA)n Simple_repeat Simple_repeat 3 23 0 2218 110 0 0 chr17 82636271 82636572 -6867981 + AluSx SINE Alu 1 301 -11 833 156 0 57 chr17 82636976 82636998 -6867555 - FLAM_C SINE Alu -169 133 111 1974 135 3 47 chr17 82636998 82637316 -6867237 + AluJb SINE Alu 1 304 -8 833 156 0 57 chr17 82637316 82637434 -6867119 - FLAM_C SINE Alu -191 111 1 2370 68 3 39 chr17 82637757 82638065 -6866488 + AluSp SINE Alu 1 297 -16 383 118 0 0 chr17 82638082 82638133 -6866420 + Charlie3 DNA MER1_type 2662 2712 0 1981 171 0 13 chr17 82638374 82638690 -6865863 - AluJb SINE Alu 0 312 1 2554 52 0 0 chr17 82638806 82639096 -6865457 + AluY SINE Alu 1 290 -21 381 340 87 0 chr17 82639168 82639409 -6865144 + L1MC/D LINE L1 5531 5792 -2016 512 169 0 108 chr17 82639465 82639580 -6864973 + L1MC4 LINE L1 7481 7574 -468 2008 152 0 13 chr17 82639580 82639890 -6864663 + AluJb SINE Alu 1 306 -6 512 169 0 108 chr17 82639890 82639940 -6864613 + L1MC4 LINE L1 7574 7628 -414 2140 106 13 19 chr17 82639940 82640251 -6864302 + AluSx SINE Alu 1 309 -3 2066 127 7 0 chr17 82640704 82640988 -6863565 + AluSx SINE Alu 5 290 -22 1912 107 37 40 chr17 82641101 82641263 -6863290 - AluSg SINE Alu -13 297 135 2516 70 0 6 chr17 82641263 82641575 -6862978 - AluY SINE Alu -1 310 1 1912 107 37 40 chr17 82641575 82641710 -6862843 - AluSg SINE Alu -175 135 1 1430 166 73 47 chr17 82641965 82642100 -6862453 + AluJb SINE Alu 2 132 -180 2705 43 0 0 chr17 82642100 82642402 -6862151 + AluY SINE Alu 1 302 -9 1690 107 0 0 chr17 82642408 82642623 -6861930 + AluSg/x SINE Alu 76 290 -20 1430 166 73 47 chr17 82642623 82642781 -6861772 + AluJb SINE Alu 136 310 -2 898 130 8 0 chr17 82643894 82644025 -6860528 + AluSg/x SINE Alu 132 263 -47 182 250 96 0 chr17 82644031 82644083 -6860470 - L2 LINE L2 -2 3270 3214 2460 93 3 3 chr17 82644350 82644662 -6859891 + AluSx SINE Alu 1 312 0 595 321 58 38 chr17 82644667 82645062 -6859491 - L2 LINE L2 -442 2872 2470 862 130 0 0 chr17 82645185 82645300 -6859253 + FLAM_C SINE Alu 1 115 -28 279 0 0 0 chr17 82645306 82645337 -6859216 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2322 94 3 28 chr17 82645337 82645656 -6858897 + AluSx SINE Alu 1 311 -1 420 265 163 61 chr17 82646072 82646174 -6858379 + L1MC5 LINE L1 7492 7582 -379 2383 66 24 0 chr17 82646174 82646463 -6858090 + AluSp SINE Alu 1 296 -17 420 265 163 61 chr17 82646463 82646624 -6857929 + L1MC5 LINE L1 7582 7782 -179 2292 123 3 0 chr17 82646624 82646932 -6857621 + AluSq SINE Alu 1 309 -4 1921 134 45 7 chr17 82646948 82647240 -6857313 + AluSq SINE Alu 1 303 -10 1778 131 68 58 chr17 82647249 82647303 -6857250 + L1MB4 LINE L1 5779 5831 -349 2587 57 0 0 chr17 82647303 82647604 -6856949 + AluY SINE Alu 1 301 -10 1778 131 68 58 chr17 82647604 82647896 -6856657 + L1MB4 LINE L1 5831 6132 -48 2205 114 7 3 chr17 82647896 82648202 -6856351 + AluSp SINE Alu 1 307 -6 1778 131 68 58 chr17 82648202 82648235 -6856318 + L1MB4 LINE L1 6132 6163 -17 1657 122 105 44 chr17 82648261 82648380 -6856173 + AluSx SINE Alu 1 111 -201 2435 63 10 0 chr17 82648380 82648683 -6855870 + AluY SINE Alu 1 306 -5 1657 122 105 44 chr17 82648683 82648857 -6855696 + AluSx SINE Alu 111 312 0 2674 46 0 0 chr17 82649511 82649818 -6854735 + AluY SINE Alu 3 309 -2 342 242 88 41 chr17 82649918 82650048 -6854505 - MIR SINE MIR -44 164 31 25 0 0 0 chr17 82650637 82650662 -6853891 + GC_rich Low_complexity Low_complexity 1 25 0 1005 149 0 48 chr17 82651853 82652041 -6852512 - AluJb SINE Alu 0 312 134 189 0 0 0 chr17 82652394 82652415 -6852138 + (A)n Simple_repeat Simple_repeat 1 21 0 998 129 7 0 chr17 82652527 82652666 -6851887 + AluSq/x SINE Alu 6 145 -168 1494 170 37 37 chr17 82652667 82652803 -6851750 + AluSx SINE Alu 1 136 -166 1983 103 0 73 chr17 82652803 82652947 -6851606 + AluSg SINE Alu 1 113 -197 2563 49 0 20 chr17 82652947 82653252 -6851301 + AluY SINE Alu 1 299 -12 1983 103 0 73 chr17 82653252 82653409 -6851144 + AluSg SINE Alu 113 280 -30 321 26 0 0 chr17 82653414 82653452 -6851101 + (CA)n Simple_repeat Simple_repeat 1 38 0 1435 176 0 94 chr17 82653455 82653618 -6850935 + AluJb SINE Alu 1 119 -193 2301 90 7 0 chr17 82653618 82653907 -6850646 + AluSc SINE Alu 1 291 -18 1435 176 0 94 chr17 82653907 82654073 -6850480 + AluJb SINE Alu 119 299 -13 1494 170 37 37 chr17 82654073 82654226 -6850327 + AluSx SINE Alu 141 300 -2 2456 62 2 142 chr17 82654258 82654696 -6849857 + MER51B LTR ERV1 1 377 0 1520 188 67 17 chr17 82654772 82655128 -6849425 + MLT1A2 LTR MaLR 1 374 0 346 306 0 0 chr17 82655406 82655517 -6849036 + L1ME4a LINE L1 5724 5834 -287 904 182 88 6 chr17 82655517 82655687 -6848866 + FAM SINE Alu 1 48 -1 2178 92 3 3 chr17 82655693 82655975 -6848578 + AluSg SINE Alu 1 282 -28 219 88 0 0 chr17 82655975 82656009 -6848544 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 2176 123 3 16 chr17 82656009 82656325 -6848228 + AluSx SINE Alu 1 312 0 2053 134 7 0 chr17 82656342 82656632 -6847921 + AluSx SINE Alu 6 297 -15 500 157 128 0 chr17 82656798 82656900 -6847653 - FLAM_A SINE Alu -2 140 26 2214 113 0 0 chr17 82657184 82657477 -6847076 + AluSx SINE Alu 1 293 -19 2457 145 7 30 chr17 82657480 82657915 -6846638 - MER65A LTR ERV1 -20 425 1 2700 51 0 0 chr17 82657945 82658256 -6846297 - AluY SINE Alu 0 311 1 2369 88 0 7 chr17 82658258 82658554 -6845999 - AluSg SINE Alu -16 294 1 2142 125 3 10 chr17 82659758 82660069 -6844484 + AluSq SINE Alu 1 309 -4 1676 133 4 0 chr17 82660069 82660303 -6844250 + AluJb SINE Alu 1 235 -77 180 0 0 0 chr17 82660316 82660336 -6844217 + (A)n Simple_repeat Simple_repeat 1 20 0 2170 84 61 66 chr17 82660347 82660607 -6843946 + MER51B LTR ERV1 1 260 -117 1942 107 86 24 chr17 82660607 82660758 -6843795 - AluSx SINE Alu -3 309 169 2157 123 3 7 chr17 82660758 82661060 -6843493 - AluSg SINE Alu -9 301 1 1942 107 86 24 chr17 82661060 82661199 -6843354 - AluSx SINE Alu -143 169 1 2170 84 61 66 chr17 82661199 82661317 -6843236 + MER51B LTR ERV1 260 377 0 1901 90 90 21 chr17 82661339 82661618 -6842935 - AluSq SINE Alu -15 298 1 2473 122 48 21 chr17 82661618 82662044 -6842509 + MER4D LTR ERV1 302 742 -130 2203 102 24 3 chr17 82662048 82662343 -6842210 + AluSx SINE Alu 1 301 -11 361 244 8 59 chr17 82662597 82662716 -6841837 + MER77 LTR ERV1 66 178 -427 256 163 0 0 chr17 82662783 82662826 -6841727 + FRAM SINE Alu 72 114 -52 1040 169 21 78 chr17 82662826 82663068 -6841485 + AluJo SINE Alu 85 312 0 761 262 89 72 chr17 82663070 82663596 -6840957 + MER21B LTR ERV1 171 705 -158 2294 96 7 0 chr17 82663691 82663984 -6840569 - AluSq SINE Alu -18 295 1 472 111 0 0 chr17 82664010 82664073 -6840480 - AluS SINE Alu -237 75 13 2388 97 0 0 chr17 82664093 82664392 -6840161 - AluSx SINE Alu -13 299 1 582 108 11 0 chr17 82664618 82664711 -6839842 - AluSg/x SINE Alu -6 306 213 1186 187 46 61 chr17 82664872 82665300 -6839253 - L1MDb LINE L1 -4929 1611 1160 708 242 21 5 chr17 82665527 82665713 -6838840 + MER5A DNA MER1_type 1 189 0 923 317 26 12 chr17 82666083 82666499 -6838054 + Harlequin LTR ERV1 5089 5510 -2275 305 167 33 0 chr17 82666506 82666566 -6837987 - Alu SINE Alu 0 308 247 420 331 0 0 chr17 82666718 82666863 -6837690 + Harlequin LTR ERV1 2751 2895 -4001 292 345 0 0 chr17 82667085 82667204 -6837349 + Harlequin LTR ERV1 3034 3152 -3744 2101 118 3 23 chr17 82667543 82667849 -6836704 - AluSx SINE Alu -7 305 6 2298 87 7 7 chr17 82667941 82668239 -6836314 + AluSg SINE Alu 1 298 -12 2139 117 45 0 chr17 82668249 82668540 -6836013 + AluSg SINE Alu 1 304 -6 2039 115 34 7 chr17 82669126 82669422 -6835131 - AluSx SINE Alu -8 304 1 2419 60 17 7 chr17 82669432 82669731 -6834822 - AluY SINE Alu -9 302 1 710 180 25 0 chr17 82669747 82669869 -6834684 - FLAM_C SINE Alu -17 126 2 2462 84 0 0 chr17 82669872 82670168 -6834385 - AluSx SINE Alu -16 296 1 2133 96 36 0 chr17 82670599 82670879 -6833674 + AluSc SINE Alu 1 290 -19 2392 86 0 3 chr17 82671197 82671499 -6833054 + AluSx SINE Alu 1 301 -11 930 157 0 27 chr17 82671526 82671673 -6832880 + AluJo SINE Alu 1 143 -169 2307 97 7 0 chr17 82671674 82671972 -6832581 + AluSg SINE Alu 1 300 -10 350 272 122 14 chr17 82672201 82672348 -6832205 - MIR3 SINE MIR -14 194 32 2156 125 7 0 chr17 82673079 82673375 -6831178 - AluSx SINE Alu -10 302 5 2213 103 10 19 chr17 82673828 82674140 -6830413 - AluSx SINE Alu -3 309 1 512 169 0 108 chr17 82674140 82674190 -6830363 - L1MC4 LINE L1 -414 7628 7574 2008 152 0 13 chr17 82674190 82674500 -6830053 - AluJb SINE Alu -6 306 1 512 169 0 108 chr17 82674500 82674615 -6829938 - L1MC4 LINE L1 -468 7574 7481 381 340 87 0 chr17 82674671 82674912 -6829641 - L1MC/D LINE L1 -2016 5792 5531 2554 52 0 0 chr17 82674984 82675274 -6829279 - AluY SINE Alu -21 290 1 1949 173 0 13 chr17 82675390 82675702 -6828851 + AluJb SINE Alu 1 308 -4 2176 117 0 0 chr17 82676067 82676357 -6828196 + AluSc SINE Alu 1 290 -19 2392 86 0 3 chr17 82676675 82676977 -6827576 + AluSx SINE Alu 1 301 -11 885 152 0 0 chr17 82677004 82677129 -6827424 + FLAM_C SINE Alu 1 125 -18 2263 98 10 0 chr17 82677152 82677449 -6827104 + AluSg SINE Alu 1 300 -10 350 272 122 14 chr17 82677678 82677825 -6826728 - MIR3 SINE MIR -14 194 32 2335 100 7 0 chr17 82678556 82678856 -6825697 - AluSx SINE Alu -10 302 1 64 35 0 0 chr17 82678864 82678949 -6825604 + AT_rich Low_complexity Low_complexity 1 85 0 2125 131 0 16 chr17 82678953 82679265 -6825288 - AluSx SINE Alu -5 307 1 1986 140 0 56 chr17 82679582 82679904 -6824649 - AluJb SINE Alu -8 304 1 867 166 85 30 chr17 82680138 82680337 -6824216 + MER2 DNA MER2_type 1 210 -135 2303 129 0 0 chr17 82680341 82680652 -6823901 - AluSx SINE Alu -1 311 1 312 274 41 0 chr17 82680652 82680725 -6823828 + MER2 DNA MER2_type 269 344 -1 409 296 126 15 chr17 82680733 82680939 -6823614 + MIR SINE MIR 31 259 -3 2384 100 0 0 chr17 82680962 82681263 -6823290 + AluSx SINE Alu 1 301 -11 2837 171 41 11 chr17 82681512 82682075 -6822478 + L1MB5 LINE L1 5585 6164 -10 30 27 0 0 chr17 82682076 82682113 -6822440 + AT_rich Low_complexity Low_complexity 1 37 0 693 101 0 0 chr17 82682132 82682231 -6822322 - AluSc SINE Alu -75 234 136 355 255 140 32 chr17 82682384 82682477 -6822076 - MER5B DNA MER1_type -4 174 92 1828 170 26 22 chr17 82682477 82682788 -6821765 - AluJb SINE Alu 0 312 1 355 255 140 32 chr17 82682788 82682851 -6821702 - MER5B DNA MER1_type -86 92 1 2277 125 0 0 chr17 82682953 82683258 -6821295 + AluSq SINE Alu 1 305 -8 603 264 200 55 chr17 82684113 82684553 -6820000 - MLT1H1 LTR MaLR 0 555 52 751 204 6 6 chr17 82684556 82684713 -6819840 - FRAM SINE Alu -25 151 1 2334 100 7 7 chr17 82684978 82685287 -6819266 + AluSx SINE Alu 2 310 -2 882 193 69 0 chr17 82685502 82685704 -6818849 - MER20 DNA MER1_type 0 219 4 1683 113 0 0 chr17 82685954 82686167 -6818386 + AluSx SINE Alu 1 213 -99 2238 185 60 10 chr17 82686186 82686667 -6817886 - LTR22 LTR ERVK -4 505 1 582 108 11 0 chr17 82686667 82686760 -6817793 + AluSx SINE Alu 213 306 -6 664 446 10 38 chr17 82686992 82687281 -6817272 + AluSx SINE Alu 3 283 -19 1876 157 7 4 chr17 82687306 82687586 -6816967 + AluJo SINE Alu 1 281 -31 * 1933 97 108 4 chr17 82687585 82687863 -6816690 - AluSg1 SINE Alu -2 307 1 2362 95 0 3 chr17 82689211 82689507 -6815046 - AluSx SINE Alu -17 295 1 2256 76 3 40 chr17 82689520 82689823 -6814730 - AluY SINE Alu -19 292 1 229 242 100 42 chr17 82695775 82695895 -6808658 - Charlie7 DNA MER1_type -48 2564 2438 2454 74 17 0 chr17 82695929 82696227 -6808326 + AluSx SINE Alu 2 304 -8 3438 242 108 54 chr17 82697427 82697589 -6806964 + L1MC4 LINE L1 6463 6615 -1427 1851 177 3 10 chr17 82697589 82697900 -6806653 - AluJb SINE Alu 0 312 4 3438 242 108 54 chr17 82697900 82699235 -6805318 + L1MC4 LINE L1 6615 8040 -2 255 308 19 0 chr17 82699983 82700090 -6804463 - L1ME3A LINE L1 -17 6153 6045 2489 92 0 0 chr17 82701019 82701325 -6803228 - AluSg SINE Alu -2 308 3 701 284 71 0 chr17 82702619 82702830 -6801723 - MIR SINE MIR -22 240 15 2517 54 3 0 chr17 82703298 82703594 -6800959 - AluY SINE Alu -14 297 1 2305 96 3 0 chr17 82703728 82704019 -6800534 - AluSg SINE Alu -17 293 2 300 301 82 20 chr17 82704211 82704357 -6800196 - L2 LINE L2 -169 3144 2990 215 326 153 29 chr17 82704456 82704618 -6799935 - L2 LINE L2 -510 2804 2601 855 222 58 0 chr17 82704618 82704825 -6799728 + MER20 DNA MER1_type 1 219 0 215 326 153 29 chr17 82704825 82704904 -6799649 - L2 LINE L2 -713 2601 2533 1365 158 138 4 chr17 82705385 82705631 -6798922 - AluJb SINE Alu -33 279 1 2215 114 10 0 chr17 82706011 82706308 -6798245 - AluJb SINE Alu -12 300 1 2226 90 0 28 chr17 82707053 82707371 -6797182 + AluSg SINE Alu 1 310 0 384 220 102 165 chr17 82707701 82707937 -6796616 - MER112 DNA MER1_type -11 249 29 258 331 73 16 chr17 82709596 82709720 -6794833 - MIR SINE MIR -50 212 82 2039 117 4 0 chr17 82709848 82710121 -6794432 + AluSx SINE Alu 1 274 -38 306 0 0 0 chr17 82710121 82710155 -6794398 + (TG)n Simple_repeat Simple_repeat 1 34 0 335 360 0 0 chr17 82710160 82710249 -6794304 + L1MC4 LINE L1 6614 6702 -1340 * 342 337 0 0 chr17 82710196 82710285 -6794268 - L1MC4 LINE L1 -1339 6703 6615 226 284 0 63 chr17 82710290 82710385 -6794168 + L1MC4 LINE L1 6614 6702 -1340 * 236 286 48 0 chr17 82710363 82710447 -6794106 - L1MC4 LINE L1 -1340 6702 6615 329 303 22 11 chr17 82710448 82710537 -6794016 + L1MC4 LINE L1 6614 6703 -1339 302 260 27 0 chr17 82710522 82710595 -6793958 - L1MC3 LINE L1 -1140 6645 6571 * 432 229 214 0 chr17 82710595 82710726 -6793827 + MER5A DNA MER1_type 12 170 -19 248 309 55 9 chr17 82711347 82711457 -6793096 + MIR3 SINE MIR 69 183 -25 2668 43 0 0 chr17 82712895 82713194 -6791359 - AluY SINE Alu -12 299 1 1660 183 17 17 chr17 82713334 82713634 -6790919 + AluJb SINE Alu 8 307 -5 195 176 0 0 chr17 82715132 82715166 -6789387 + L2 LINE L2 124 157 -3157 2412 86 10 0 chr17 82715687 82715990 -6788563 - AluSp SINE Alu -7 306 1 283 155 69 0 chr17 82715991 82716049 -6788504 - MER105 DNA DNA -55 149 88 457 171 135 0 chr17 82716996 82717107 -6787446 + L2 LINE L2 3010 3135 -178 954 165 0 6 chr17 82717558 82717716 -6786837 + FRAM SINE Alu 1 157 -9 2168 110 0 0 chr17 82717737 82718060 -6786493 + AluY SINE Alu 1 323 0 2564 54 0 22 chr17 82718219 82718532 -6786021 - AluY SINE Alu -5 306 1 2265 110 3 3 chr17 82718532 82718833 -6785720 - AluSq SINE Alu -12 301 1 298 133 96 24 chr17 82718833 82718916 -6785637 + Charlie5 DNA MER1_type 2407 2495 -117 559 158 4 3 chr17 82718917 82719140 -6785413 + AluJo SINE Alu 1 280 -32 2568 60 0 22 chr17 82719177 82719493 -6785060 - AluY SINE Alu 0 311 3 276 77 0 0 chr17 82719550 82719589 -6784964 + (A)n Simple_repeat Simple_repeat 1 39 0 651 255 97 12 chr17 82719657 82719916 -6784637 - HAL1 LINE L1 -2 2505 2225 493 253 188 31 chr17 82720149 82720350 -6784203 - HAL1 LINE L1 -643 1864 1696 1991 138 11 4 chr17 82720350 82720625 -6783928 - AluJb SINE Alu -35 277 1 493 253 188 31 chr17 82720625 82720715 -6783838 - HAL1 LINE L1 -811 1696 1527 234 358 53 10 chr17 82721253 82721460 -6783093 - HAL1 LINE L1 -865 1642 1427 531 260 115 65 chr17 82721472 82722037 -6782516 - L1MEd LINE L1 -5014 1105 513 254 244 22 22 chr17 82722369 82722459 -6782094 - L1MEd LINE L1 -6028 91 2 516 219 259 4 chr17 82722460 82722707 -6781846 - HAL1 LINE L1 -965 1542 1233 650 284 67 4 chr17 82722770 82723024 -6781529 - HAL1 LINE L1 -1430 1077 808 * 717 216 184 57 chr17 82723005 82723227 -6781326 + L1MD2 LINE L1 6029 6296 -63 2603 61 0 0 chr17 82723227 82723524 -6781029 - AluSg SINE Alu -13 297 1 717 216 184 57 chr17 82723524 82723583 -6780970 + L1MD2 LINE L1 6296 6346 -13 2096 150 0 10 chr17 82723584 82723898 -6780655 + AluSx SINE Alu 1 311 -1 817 304 134 48 chr17 82723900 82724654 -6779899 - HAL1 LINE L1 -1687 820 2 2067 99 39 14 chr17 82725554 82725838 -6778715 + AluSx SINE Alu 1 291 -21 538 206 59 15 chr17 82725986 82726122 -6778431 + FLAM_C SINE Alu 2 143 0 4559 155 23 28 chr17 82727053 82727941 -6776612 + L1MB7 LINE L1 5292 6179 -5 576 136 107 0 chr17 82727959 82728062 -6776491 + AluSg/x SINE Alu 192 305 -4 928 140 35 58 chr17 82728076 82728247 -6776306 + AluJo SINE Alu 7 173 -139 241 289 132 0 chr17 82728463 82728539 -6776014 + MIR3 SINE MIR 109 194 -14 180 0 0 0 chr17 82729099 82729119 -6775434 + (T)n Simple_repeat Simple_repeat 1 20 0 474 18 0 0 chr17 82729726 82729781 -6774772 + (CA)n Simple_repeat Simple_repeat 2 56 0 2189 92 7 10 chr17 82730289 82730574 -6773979 + AluSq SINE Alu 1 286 -27 201 39 0 0 chr17 82730574 82730600 -6773953 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 254 209 9 109 chr17 82730609 82730719 -6773834 + L1ME4a LINE L1 5972 6070 -51 1728 129 60 66 chr17 82731188 82731490 -6773063 + AluSq SINE Alu 1 300 -13 2627 64 0 0 chr17 82731493 82731804 -6772749 + AluY SINE Alu 1 311 0 847 132 105 75 chr17 82731816 82731913 -6772640 + L1MD3 LINE L1 7731 7824 -171 662 186 0 31 chr17 82731913 82732042 -6772511 - FLAM_A SINE Alu -8 125 1 847 132 105 75 chr17 82732042 82732172 -6772381 + L1MD3 LINE L1 7824 7965 -30 1019 113 17 0 chr17 82732515 82732692 -6771861 + L1MB3 LINE L1 6003 6182 -1 1170 180 67 17 chr17 82733674 82733913 -6770640 + Charlie1 DNA MER1_type 1 251 -2510 372 186 43 114 chr17 82733883 82734023 -6770530 + Charlie1 DNA MER1_type 2632 2761 0 * 182 288 72 50 chr17 82734031 82734170 -6770383 + L2 LINE L2 2919 3060 -212 368 276 195 0 chr17 82734297 82734471 -6770082 - L2 LINE L2 -6 3307 3100 425 174 121 8 chr17 82734535 82734640 -6769913 + Charlie5 DNA MER1_type 2381 2505 -80 1879 176 0 13 chr17 82734640 82734952 -6769601 - AluJb SINE Alu -4 308 1 425 174 121 8 chr17 82734952 82734978 -6769575 + Charlie5 DNA MER1_type 2505 2527 -58 980 227 37 5 chr17 82735014 82735230 -6769323 + MER58A DNA MER1_type 1 223 -1 366 256 133 47 chr17 82735301 82735512 -6769041 + MIR SINE MIR 9 237 -25 309 229 43 0 chr17 82735925 82735995 -6768558 + MER5A DNA MER1_type 10 82 -107 231 157 157 71 chr17 82736610 82736680 -6767873 - MER94 DNA DNA -53 81 6 362 235 49 107 chr17 82737325 82737564 -6766989 + L1MC4 LINE L1 7809 8042 0 2323 102 0 0 chr17 82737620 82737913 -6766640 - AluSx SINE Alu -19 293 1 2117 106 0 0 chr17 82738263 82738579 -6765974 + AluSx SINE Alu 1 316 0 1427 156 62 16 chr17 82738591 82738848 -6765705 + AluJb SINE Alu 1 269 -43 234 261 0 0 chr17 82740764 82740833 -6763720 + A-rich Low_complexity Low_complexity 1 69 0 735 186 102 0 chr17 82741590 82741757 -6762796 + MIR SINE MIR 53 236 -26 285 257 152 29 chr17 82742316 82742421 -6762132 - MIR SINE MIR -60 148 31 1888 161 0 0 chr17 82743617 82743908 -6760645 + AluSx SINE Alu 1 291 -21 2333 81 0 3 chr17 82743961 82744270 -6760283 + AluSp SINE Alu 1 308 -5 552 156 23 78 chr17 82744290 82744418 -6760135 + FLAM_A SINE Alu 22 142 0 2286 91 7 0 chr17 82744937 82745244 -6759309 - AluSp SINE Alu -4 309 1 216 0 0 0 chr17 82746104 82746128 -6758425 + (TG)n Simple_repeat Simple_repeat 2 25 0 32 57 0 0 chr17 82746995 82747048 -6757505 + GC_rich Low_complexity Low_complexity 1 53 0 244 195 0 23 chr17 82747363 82747450 -6757103 + (CTGGGG)n Simple_repeat Simple_repeat 1 85 0 183 80 0 0 chr17 82747488 82747513 -6757040 + (CGG)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr17 82747538 82747559 -6756994 + GC_rich Low_complexity Low_complexity 1 21 0 368 304 34 20 chr17 82747820 82747968 -6756585 - L2 LINE L2 -10 3303 3154 498 239 167 56 chr17 82748201 82748435 -6756118 + MIR SINE MIR 3 262 0 2157 97 0 34 chr17 82748520 82748840 -6755713 + AluSc SINE Alu 1 309 0 2160 115 0 26 chr17 82748858 82749170 -6755383 + AluSx SINE Alu 1 304 -8 2169 103 0 0 chr17 82749170 82749460 -6755093 + AluSx SINE Alu 1 290 -22 280 98 0 0 chr17 82749469 82749510 -6755043 + AluSx SINE Alu 1 41 -262 1818 146 4 0 chr17 82749514 82749788 -6754765 + AluSx SINE Alu 20 294 -18 2085 139 3 0 chr17 82750057 82750366 -6754187 + AluSx SINE Alu 1 310 -2 2289 95 3 0 chr17 82750375 82750680 -6753873 + AluSp SINE Alu 1 306 -7 347 330 92 12 chr17 82751054 82751227 -6753326 - MIR SINE MIR -2 260 74 2113 107 3 0 chr17 82751376 82751665 -6752888 - AluSx SINE Alu -20 292 3 284 246 0 0 chr17 82751843 82751912 -6752641 - MIR SINE MIR 0 262 194 306 271 76 8 chr17 82751949 82752067 -6752486 + L2 LINE L2 3167 3292 -21 2070 111 14 0 chr17 82752092 82752380 -6752173 + AluSx SINE Alu 10 301 -11 196 333 163 39 chr17 82753300 82753453 -6751100 - MIR3 SINE MIR -21 187 16 240 364 48 37 chr17 82753629 82753816 -6750737 + L2 LINE L2 2284 2472 -842 737 240 43 19 chr17 82753932 82754140 -6750413 + MIR SINE MIR 9 221 -41 2143 118 0 9 chr17 82754462 82754777 -6749776 - AluSx SINE Alu 0 312 1 823 131 0 83 chr17 82754781 82754926 -6749627 - FLAM_C SINE Alu 0 133 1 390 169 0 12 chr17 82754926 82755004 -6749549 + Charlie5 DNA MER1_type 2543 2619 0 2368 99 0 0 chr17 82755208 82755520 -6749033 + AluSx SINE Alu 1 312 0 1514 114 23 0 chr17 82755740 82755960 -6748593 + AluSg/x SINE Alu 85 309 -1 204 40 0 0 chr17 82755974 82755999 -6748554 + (CAAT)n Simple_repeat Simple_repeat 2 26 0 460 295 142 16 chr17 82756005 82756259 -6748294 + HERV16 LTR ERVL 211 496 -4500 909 224 95 15 chr17 82756401 82756665 -6747888 + HERV16 LTR ERVL 745 1029 -3967 341 317 54 18 chr17 82756815 82756982 -6747571 + LTR16A LTR ERVL 244 416 -34 2158 123 0 0 chr17 82757631 82757933 -6746620 - AluSx SINE Alu -10 302 1 2156 113 0 7 chr17 82758386 82758688 -6745865 + AluSx SINE Alu 3 302 -10 341 133 3 0 chr17 82758976 82759042 -6745511 - Alu SINE Alu -249 53 1 260 169 31 31 chr17 82759042 82759094 -6745459 + MLT1C LTR MaLR 416 467 0 2289 88 0 7 chr17 82759126 82759423 -6745130 - AluSq SINE Alu -18 295 1 1962 127 27 3 chr17 82759671 82759963 -6744590 - AluJo SINE Alu -13 299 1 889 161 49 0 chr17 82760179 82760341 -6744212 - AluJb SINE Alu -7 305 136 457 260 133 42 chr17 82760942 82761121 -6743432 + MIR SINE MIR 39 241 -21 39 0 0 0 chr17 82761517 82761556 -6742997 + AT_rich Low_complexity Low_complexity 1 39 0 193 329 44 66 chr17 82761601 82761738 -6742815 - MIR3 SINE MIR -54 154 21 283 256 152 24 chr17 82766552 82766677 -6737876 - L2 LINE L2 -3 3310 3170 256 287 161 35 chr17 82769502 82769756 -6734797 + L2 LINE L2 2564 2849 -465 2087 110 13 10 chr17 82769898 82770208 -6734345 - AluSx SINE Alu -1 311 1 2405 79 0 6 chr17 82770219 82770534 -6734019 - AluSq SINE Alu 0 313 1 815 151 0 0 chr17 82770666 82770785 -6733768 - FLAM_C SINE Alu -24 119 1 191 217 43 0 chr17 82770856 82770902 -6733651 + L2 LINE L2 3263 3310 -3 487 336 29 29 chr17 82772485 82772762 -6731791 + L2 LINE L2 2811 3087 -185 330 67 0 0 chr17 82774320 82774334 -6730219 + (TG)n Simple_repeat Simple_repeat 1 59 0 330 67 0 0 chr17 82774334 82774379 -6730174 + (TG)n Simple_repeat Simple_repeat 2 46 0 2332 95 0 13 chr17 82774398 82774713 -6729840 - AluSx SINE Alu -1 311 1 1741 169 0 7 chr17 82774723 82775013 -6729540 - AluJo SINE Alu -24 288 1 2217 78 10 3 chr17 82775999 82776279 -6728274 + AluSc SINE Alu 1 285 -24 459 0 0 0 chr17 82776279 82776330 -6728223 + (CA)n Simple_repeat Simple_repeat 2 52 0 2217 78 10 3 chr17 82776330 82776344 -6728209 + AluSc SINE Alu 285 297 -12 339 133 0 0 chr17 82776538 82776598 -6727955 + AluS SINE Alu 1 60 -239 762 175 7 14 chr17 82776646 82776789 -6727764 - FLAM_C SINE Alu -1 142 1 2202 98 7 0 chr17 82776819 82777114 -6727439 + AluSx SINE Alu 1 297 -15 1458 168 4 0 chr17 82777214 82777446 -6727107 + AluSx SINE Alu 1 233 -79 588 161 0 0 chr17 82777447 82777540 -6727013 - AluSg/x SINE Alu -83 229 137 2198 105 3 3 chr17 82777606 82777912 -6726641 - AluSx SINE Alu -6 306 1 2467 71 0 3 chr17 82778307 82778618 -6725935 + AluSp SINE Alu 1 310 -3 321 312 164 28 chr17 82778807 82779131 -6725422 + L2 LINE L2 2550 2917 -397 253 349 37 0 chr17 82779208 82779317 -6725236 + MIR SINE MIR 91 203 -59 2066 97 0 42 chr17 82779319 82779453 -6725100 + AluSx SINE Alu 3 141 -171 2400 74 0 10 chr17 82779453 82779763 -6724790 + AluSp SINE Alu 1 307 -6 2066 97 0 42 chr17 82779763 82779937 -6724616 + AluSx SINE Alu 141 298 -14 1425 223 22 84 chr17 82779966 82780405 -6724148 + L1MB8 LINE L1 5668 6133 -45 351 0 0 0 chr17 82780405 82780444 -6724109 + (CA)n Simple_repeat Simple_repeat 2 40 0 1948 117 25 11 chr17 82780449 82780732 -6723821 - AluSx SINE Alu -25 287 1 1425 223 22 84 chr17 82780732 82780758 -6723795 + L1MB8 LINE L1 6137 6106 -72 1960 140 3 10 chr17 82780758 82781066 -6723487 + AluJb SINE Alu 1 306 -6 1425 223 22 84 chr17 82781066 82781127 -6723426 + L1MB8 LINE L1 6105 6168 -10 2099 98 30 3 chr17 82781281 82781578 -6722975 - AluSp SINE Alu -7 306 2 2303 84 0 7 chr17 82781581 82781879 -6722674 - AluSx SINE Alu -16 296 1 296 233 122 11 chr17 82782282 82782372 -6722181 + MIR SINE MIR 98 197 -65 2189 118 0 0 chr17 82782546 82782843 -6721710 + AluSx SINE Alu 1 297 -15 2024 94 0 28 chr17 82782856 82782995 -6721558 + AluSg SINE Alu 1 142 -162 2179 116 0 3 chr17 82782995 82783306 -6721247 + AluSg SINE Alu 1 310 0 2024 94 0 28 chr17 82783306 82783478 -6721075 + AluSg SINE Alu 142 304 0 233 218 0 0 chr17 82783595 82783650 -6720903 - L1MB5 LINE L1 -15 6159 6105 2419 61 0 0 chr17 82783654 82783951 -6720602 - AluY SINE Alu -14 297 1 504 309 101 10 chr17 82784038 82784245 -6720308 - MIR SINE MIR -18 244 19 2320 93 0 0 chr17 82788798 82789108 -6715445 + AluSx SINE Alu 1 310 -2 354 242 84 0 chr17 82789732 82789827 -6714726 + MIR SINE MIR 41 143 -65 180 204 23 0 chr17 82789926 82789970 -6714583 - MIR SINE MIR -144 118 74 191 306 169 16 chr17 82790365 82790548 -6714005 + MIR SINE MIR 35 245 -17 452 231 123 15 chr17 82790632 82790762 -6713791 - MIR SINE MIR -115 147 4 2239 94 3 3 chr17 82791082 82791389 -6713164 - AluY SINE Alu -4 307 1 338 276 25 49 chr17 82791955 82792118 -6712435 - MIR SINE MIR -22 240 82 648 86 0 0 chr17 82793118 82793223 -6711330 + (TG)n Simple_repeat Simple_repeat 1 105 0 223 24 24 49 chr17 82793468 82793509 -6711044 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1053 164 18 53 chr17 82794482 82794707 -6709846 - MER20 DNA MER1_type 0 219 3 391 237 0 32 chr17 82797064 82797157 -6707396 - MIR SINE MIR -66 196 107 256 257 0 40 chr17 82797464 82797565 -6706988 + L1MC/D LINE L1 5796 5892 -1916 1192 175 39 77 chr17 82797758 82798044 -6706509 - AluJb SINE Alu -14 298 24 2432 77 3 0 chr17 82798086 82798398 -6706155 + AluSp SINE Alu 1 313 0 2038 129 0 16 chr17 82798789 82798963 -6705590 - AluSc SINE Alu -4 305 137 2294 84 0 3 chr17 82798963 82799259 -6705294 - AluSp SINE Alu -18 295 1 2038 129 0 16 chr17 82799259 82799394 -6705159 - AluSc SINE Alu -172 137 1 1746 134 24 14 chr17 82799396 82799687 -6704866 - AluJo SINE Alu -18 294 1 188 291 105 12 chr17 82799690 82799776 -6704777 - MIR SINE MIR -66 196 103 2217 105 0 10 chr17 82800070 82800384 -6704169 + AluSx SINE Alu 1 311 -1 210 255 157 10 chr17 82800432 82800534 -6704019 - MIR3 SINE MIR -87 121 5 234 247 67 45 chr17 82801585 82801674 -6702879 + MIR SINE MIR 20 110 -152 807 160 8 0 chr17 82801803 82801934 -6702619 + AluJo/FLAM SINE Alu 1 132 -180 933 136 7 0 chr17 82801934 82802074 -6702479 - AluJo SINE Alu -170 142 2 2352 88 0 0 chr17 82802625 82802931 -6701622 - AluY SINE Alu -5 306 1 744 158 0 0 chr17 82802954 82803068 -6701485 - FLAM_A SINE Alu -16 117 4 435 277 243 37 chr17 82803073 82803427 -6701126 - L2 LINE L2 -797 2517 2091 542 180 0 0 chr17 82803445 82803545 -6701008 + AluSg/x SINE Alu 208 307 -5 2248 90 7 13 chr17 82803556 82803866 -6700687 + AluSq SINE Alu 1 308 -5 259 339 32 8 chr17 82803867 82803991 -6700562 + L1ME LINE L1 5311 5437 -684 933 202 40 52 chr17 82803993 82804245 -6700308 + L1MC4 LINE L1 6765 7013 -1029 2369 66 0 3 chr17 82804246 82804548 -6700005 + AluY SINE Alu 1 301 -10 1450 155 35 16 chr17 82804651 82804744 -6699809 + AluJo SINE Alu 25 115 -197 213 39 0 0 chr17 82804744 82804770 -6699783 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 1450 155 35 16 chr17 82804770 82804934 -6699619 + AluJo SINE Alu 115 287 -25 373 322 0 0 chr17 82804941 82805031 -6699522 + L1MC4 LINE L1 6614 6703 -1339 312 378 0 0 chr17 82804969 82805059 -6699494 - L1MC4 LINE L1 -1339 6703 6614 * 180 0 0 0 chr17 82805059 82805079 -6699474 + (TG)n Simple_repeat Simple_repeat 2 21 0 388 193 0 92 chr17 82805097 82805206 -6699347 + L1MC5 LINE L1 7036 7134 -827 1072 254 49 14 chr17 82805206 82805492 -6699061 - MLT1E LTR MaLR 0 593 298 756 222 18 0 chr17 82805492 82805659 -6698894 + MER45B DNA AcHobo 1 170 -870 1199 138 40 45 chr17 82805808 82805843 -6698710 + MER45B DNA AcHobo 607 641 -399 2150 116 0 10 chr17 82805843 82806154 -6698399 + AluSx SINE Alu 5 312 0 1199 138 40 45 chr17 82806154 82806365 -6698188 + MER45B DNA AcHobo 641 852 -188 545 143 0 0 chr17 82806378 82806455 -6698098 + FLAM_A SINE Alu 22 98 -44 1080 223 154 67 chr17 82807593 82807990 -6696563 + MLT1D LTR MaLR 2 446 -59 2187 116 3 0 chr17 82807990 82808301 -6696252 - AluSx SINE Alu 0 312 1 1080 223 154 67 chr17 82808301 82808365 -6696188 + MLT1D LTR MaLR 446 503 -2 230 149 0 0 chr17 82808725 82808772 -6695781 - MER96B DNA MER1_type? -238 179 133 790 196 0 0 chr17 82808798 82808931 -6695622 - FLAM_A SINE Alu 0 133 1 2216 126 0 0 chr17 82808957 82809267 -6695286 + AluSx SINE Alu 2 311 -1 2069 116 10 0 chr17 82809272 82809573 -6694980 + AluSx SINE Alu 1 304 -8 297 307 41 48 chr17 82809574 82809844 -6694709 - L2 LINE L2 -450 2864 2597 180 257 40 14 chr17 82810157 82810231 -6694322 + L2 LINE L2 2239 2314 -1000 2143 94 3 7 chr17 82810264 82810562 -6693991 - AluSg SINE Alu -13 297 1 2321 90 3 0 chr17 82810569 82810880 -6693673 - AluSx SINE Alu 0 312 1 1070 129 6 6 chr17 82811001 82811171 -6693382 + AluJb SINE Alu 143 312 0 2136 106 0 0 chr17 82811190 82811482 -6693071 + AluSg SINE Alu 1 292 -18 739 183 0 0 chr17 82812538 82812664 -6691889 + MSTB1 LTR MaLR 1 126 -306 1834 182 91 5 chr17 82812711 82813096 -6691457 + MER50 LTR ERV1 1 418 -316 1024 99 0 7 chr17 82814407 82814559 -6689994 + AluY SINE Alu 150 300 -11 641 186 17 8 chr17 82814564 82814682 -6689871 + AluSg/x SINE Alu 171 289 -23 582 106 12 0 chr17 82814687 82814772 -6689781 - MSTC LTR MaLR -51 377 292 319 109 91 0 chr17 82814788 82814843 -6689710 - MER66A LTR ERV1 -142 336 277 292 162 44 15 chr17 82814854 82814922 -6689631 - MSTC LTR MaLR -166 262 193 609 102 31 94 chr17 82814922 82814973 -6689580 - L1MA5 LINE L1 -2 6298 6245 2283 48 3 36 chr17 82814973 82815282 -6689271 - AluY SINE Alu -12 299 1 609 102 31 94 chr17 82815282 82815358 -6689195 - L1MA5 LINE L1 -55 6245 6179 1278 164 4 18 chr17 82815358 82815584 -6688969 - AluJb SINE Alu -13 299 77 826 123 29 7 chr17 82815649 82815787 -6688766 - FRAM SINE Alu -17 159 19 1948 104 49 34 chr17 82817767 82818095 -6686458 - MER1B DNA MER1_type -4 333 1 1941 116 27 13 chr17 82818852 82819153 -6685400 - AluSx SINE Alu -7 305 1 2400 198 25 30 chr17 82819811 82820226 -6684327 - LTR40a LTR ERVL 0 519 105 2427 63 3 0 chr17 82820226 82820529 -6684024 - AluY SINE Alu -7 304 1 2400 198 25 30 chr17 82820529 82820588 -6683965 - LTR40a LTR ERVL -414 105 47 186 43 0 0 chr17 82820764 82820787 -6683766 + (CAAAG)n Simple_repeat Simple_repeat 2 24 0 220 395 6 17 chr17 82820885 82821062 -6683491 + L2 LINE L2 1847 2021 -1293 204 135 0 0 chr17 82821177 82821214 -6683339 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 1000 162 0 86 chr17 82821218 82821303 -6683250 - AluJo SINE Alu -8 304 213 2144 99 0 26 chr17 82821303 82821607 -6682946 - AluSc SINE Alu -13 296 1 1000 162 0 86 chr17 82821607 82821743 -6682810 - AluJo SINE Alu -99 213 102 561 186 57 40 chr17 82821745 82821869 -6682684 - MER8 DNA MER2_type -113 126 1 36 23 0 0 chr17 82821880 82821923 -6682630 + AT_rich Low_complexity Low_complexity 1 43 0 244 319 21 0 chr17 82821978 82822072 -6682481 - L1MDa LINE L1 -4515 2442 2347 611 93 0 0 chr17 82822072 82822147 -6682406 - AluSq SINE Alu -154 159 85 226 283 0 0 chr17 82822154 82822200 -6682353 - L1MDa LINE L1 -6798 61 16 2206 90 7 0 chr17 82822210 82822499 -6682054 - AluSx SINE Alu -21 291 1 792 215 32 77 chr17 82822569 82822625 -6681928 + L1MC5 LINE L1 7617 7674 -287 768 136 15 38 chr17 82822625 82822757 -6681796 + AluJo/FLAM SINE Alu 1 129 -173 2126 121 0 3 chr17 82822757 82823062 -6681491 + AluSx SINE Alu 1 304 -8 792 215 32 77 chr17 82823062 82823315 -6681238 + L1MC5 LINE L1 7672 7913 -48 21 0 0 0 chr17 82823920 82823941 -6680612 + AT_rich Low_complexity Low_complexity 1 21 0 2111 103 3 0 chr17 82824028 82824320 -6680233 - AluSq SINE Alu -20 293 1 3130 156 39 18 chr17 82824356 82824914 -6679639 + MER21B LTR ERV1 273 842 -21 476 260 115 24 chr17 82824937 82825145 -6679408 + HAL1 LINE L1 2208 2434 -73 2214 110 3 0 chr17 82825485 82825793 -6678760 - AluSx SINE Alu -3 309 1 534 163 16 0 chr17 82825800 82825923 -6678630 - L1MDa LINE L1 -4476 2064 1940 785 266 132 0 chr17 82825953 82826302 -6678251 - L1M4 LINE L1 -1354 4792 4398 2408 53 0 3 chr17 82826434 82826735 -6677818 + AluY SINE Alu 1 300 -11 277 245 42 14 chr17 82827023 82827166 -6677387 - L1M4 LINE L1 -1744 4402 4256 2319 75 0 0 chr17 82827166 82827458 -6677095 + AluSg SINE Alu 1 292 -18 1780 164 0 26 chr17 82827458 82827770 -6676783 - AluJb SINE Alu -8 304 1 485 163 0 0 chr17 82827770 82827856 -6676697 + L1MB4 LINE L1 6010 6095 -85 2447 60 0 0 chr17 82828040 82828342 -6676211 - AluY SINE Alu -9 302 1 633 257 176 9 chr17 82829060 82829282 -6675271 + MIR SINE MIR 2 260 -2 465 244 41 7 chr17 82829465 82829653 -6674900 + MLT1H LTR MaLR 56 514 -35 1605 158 50 7 chr17 82829856 82830153 -6674400 - AluJb SINE Alu -2 310 1 2095 100 4 0 chr17 82830368 82830677 -6673876 + AluSx SINE Alu 2 311 0 2241 112 0 0 chr17 82830686 82830990 -6673563 + AluSq SINE Alu 1 304 -9 1756 163 3 11 chr17 82831644 82831926 -6672627 - AluJo SINE Alu -32 280 1 318 98 0 0 chr17 82831950 82832001 -6672552 + (TG)n Simple_repeat Simple_repeat 1 51 0 1516 183 57 18 chr17 82832229 82832508 -6672045 + AluJo SINE Alu 2 291 -11 1180 123 11 0 chr17 82832599 82832778 -6671775 - MER41B LTR ERV1 0 635 455 660 95 0 11 chr17 82832781 82832876 -6671677 - AluY SINE Alu -178 133 40 2698 133 40 0 chr17 82832877 82833328 -6671225 - MER41B LTR ERV1 -166 469 1 2186 113 0 10 chr17 82833464 82833773 -6670780 + AluSx SINE Alu 1 306 -6 2757 136 29 0 chr17 82834104 82834516 -6670037 - MSTB LTR MaLR -2 424 1 2233 116 0 3 chr17 82834594 82834904 -6669649 + AluSx SINE Alu 1 309 -3 189 74 0 0 chr17 82834934 82834961 -6669592 + (T)n Simple_repeat Simple_repeat 1 27 0 1647 117 0 0 chr17 82834970 82835201 -6669352 - AluSq SINE Alu -78 235 5 690 130 114 49 chr17 82835208 82835331 -6669222 - FLAM_C SINE Alu -11 132 2 2043 123 3 10 chr17 82835347 82835656 -6668897 - AluSx SINE Alu -5 307 1 2352 81 3 3 chr17 82835815 82836124 -6668429 + AluY SINE Alu 1 309 -2 451 248 223 53 chr17 82836244 82836563 -6667990 - LTR16A1 LTR ERVL -1 456 84 2738 95 95 5 chr17 82837152 82837563 -6666990 - LTR7 LTR ERV1 -2 448 1 2282 93 53 13 chr17 82837563 82837938 -6666615 - HERVH LTR ERV1 0 7713 7324 1358 130 19 0 chr17 82837938 82838154 -6666399 - HERVH LTR ERV1 -1894 5819 5600 4237 131 8 3 chr17 82838155 82838814 -6665739 - HERVH LTR ERV1 -2564 5149 4488 3179 118 6 6 chr17 82838816 82839318 -6665235 - HERVH LTR ERV1 -3720 3993 3492 858 142 20 0 chr17 82839308 82839456 -6665097 - HERVH LTR ERV1 -4423 3290 3140 * 15754 88 12 12 chr17 82839450 82842247 -6662306 - HERVH LTR ERV1 -4726 2987 1 2605 84 91 42 chr17 82842249 82842676 -6661877 - LTR7 LTR ERV1 -2 448 1 501 240 80 24 chr17 82842757 82842882 -6661671 + L2 LINE L2 3136 3267 -5 1653 152 23 36 chr17 82842890 82843132 -6661421 + AluJo SINE Alu 9 248 -64 4825 115 61 26 chr17 82843132 82843886 -6660667 - LTR17 LTR ERV1 0 780 1 1653 152 23 36 chr17 82843886 82843945 -6660608 + AluJo SINE Alu 248 306 -6 503 214 175 10 chr17 82844001 82844207 -6660346 + MLT1C LTR MaLR 6 245 -222 5604 172 179 63 chr17 82845090 82846629 -6657924 - pTR5 LTR ERV1 0 2438 450 480 162 0 30 chr17 82846812 82846911 -6657642 - MER34B LTR ERV1 0 565 470 2332 106 0 0 chr17 82846911 82847204 -6657349 + AluSx SINE Alu 1 293 -19 1728 204 31 55 chr17 82847309 82847438 -6657115 - MER34B LTR ERV1 -88 477 346 2423 82 0 0 chr17 82847438 82847741 -6656812 - AluSg SINE Alu -7 303 1 1728 204 31 55 chr17 82847741 82847984 -6656569 - MER34B LTR ERV1 -219 346 117 2285 101 10 0 chr17 82847984 82848282 -6656271 - AluSx SINE Alu -11 301 1 1728 204 31 55 chr17 82848282 82848397 -6656156 - MER34B LTR ERV1 -448 117 1 549 257 50 33 chr17 82848532 82848746 -6655807 - LTR65 LTR ERV1 -1 649 449 1338 167 5 9 chr17 82848746 82848961 -6655592 + AluJo SINE Alu 96 309 -3 859 173 45 113 chr17 82848997 82849263 -6655290 - LTR65 LTR ERV1 -256 413 166 2270 100 0 10 chr17 82849659 82849958 -6654595 + AluJb SINE Alu 1 296 -16 1112 145 0 0 chr17 82849958 82850117 -6654436 + AluJb SINE Alu 134 292 -20 2607 218 82 75 chr17 82850121 82850904 -6653649 - L1MC4a LINE L1 -788 7020 6244 2422 89 7 0 chr17 82850904 82851207 -6653346 - AluSx SINE Alu -7 305 1 2146 122 3 0 chr17 82851217 82851503 -6653050 - AluSx SINE Alu -25 287 1 2607 218 82 75 chr17 82851503 82851725 -6652828 - L1MC4a LINE L1 -1572 6236 5997 1985 137 0 58 chr17 82851730 82852058 -6652495 - AluSx SINE Alu -3 309 1 1025 212 53 83 chr17 82852096 82852335 -6652218 + MER57A LTR ERV1 1 245 -158 2489 94 0 0 chr17 82852335 82852642 -6651911 - AluSc SINE Alu 0 309 3 2266 102 7 0 chr17 82852644 82852938 -6651615 - AluSx SINE Alu -16 296 1 1025 212 53 83 chr17 82852938 82853106 -6651447 + MER57A LTR ERV1 246 399 -4 875 118 0 22 chr17 82853126 82853262 -6651291 - FLAM_C SINE Alu 0 133 1 654 301 125 44 chr17 82853262 82853525 -6651028 - L1MC4a LINE L1 -749 5397 5157 2286 100 0 0 chr17 82853525 82853826 -6650727 - AluSc SINE Alu 0 301 1 654 301 125 44 chr17 82853826 82853958 -6650595 - L1MC4a LINE L1 -989 5157 5037 1941 94 8 4 chr17 82853958 82854214 -6650339 - AluSg SINE Alu -11 299 43 654 301 125 44 chr17 82854214 82854865 -6649688 - L1MC4a LINE L1 -1109 5037 4257 2212 87 24 0 chr17 82855370 82855707 -6648846 - AluSx SINE Alu 0 344 1 640 214 39 63 chr17 82855884 82856090 -6648463 - LTR37A LTR ERV1 -196 230 30 2753 33 0 0 chr17 82858979 82859281 -6645272 + AluY SINE Alu 1 302 -9 438 127 0 0 chr17 82859404 82859475 -6645078 + (TTCC)n Simple_repeat Simple_repeat 1 71 0 831 146 108 0 chr17 82859475 82859605 -6644948 - FRAM SINE Alu -32 144 1 2229 117 0 10 chr17 82860940 82861249 -6643304 - AluSx SINE Alu -6 306 1 352 236 79 22 chr17 82861317 82861406 -6643147 - L2 LINE L2 -6 3266 3173 2192 86 3 30 chr17 82861747 82862050 -6642503 - AluSc SINE Alu -10 299 5 1924 139 3 59 chr17 82862052 82862229 -6642324 - AluJo SINE Alu -6 306 154 288 0 0 0 chr17 82862229 82862261 -6642292 + (TG)n Simple_repeat Simple_repeat 1 32 0 1924 139 3 59 chr17 82862261 82862407 -6642146 - AluJo SINE Alu -158 154 1 2066 138 0 10 chr17 82864087 82864391 -6640162 + AluSx SINE Alu 1 301 -11 2509 76 3 0 chr17 82864392 82864696 -6639857 + AluSp SINE Alu 1 305 -8 900 162 66 12 chr17 82864789 82864956 -6639597 - AluJb SINE Alu -16 296 121 2411 88 0 31 chr17 82865755 82866072 -6638481 + AluSx SINE Alu 1 307 -5 1993 114 11 0 chr17 82866539 82866828 -6637725 + AluSx SINE Alu 19 310 0 263 389 48 18 chr17 82866888 82867055 -6637498 - L2 LINE L2 -5 3267 3096 300 297 60 70 chr17 82867188 82867373 -6637180 - L1ME4a LINE L1 0 6121 5939 492 123 0 37 chr17 82867712 82867782 -6636771 + AluS SINE Alu 225 293 -17 5574 52 16 6 chr17 82867782 82868453 -6636100 + SVA Other Other 709 1386 0 1026 135 36 16 chr17 82868529 82868722 -6635831 - L1MD1 LINE L1 -165 6077 5881 1335 177 9 0 chr17 82868994 82869209 -6635344 - AluSg/x SINE Alu -11 299 83 393 80 0 0 chr17 82869293 82869343 -6635210 - U6 snRNA snRNA -6 101 52 1221 100 0 84 chr17 82869541 82869731 -6634822 - AluSg/x SINE Alu -13 297 124 2145 119 10 6 chr17 82869731 82870043 -6634510 - AluSq SINE Alu 0 313 1 286 204 68 23 chr17 82870366 82870454 -6634099 - L2 LINE L2 0 3313 3222 2135 124 7 0 chr17 82870458 82870756 -6633797 + AluSx SINE Alu 1 300 -12 522 0 0 0 chr17 82870802 82870860 -6633693 + (CA)n Simple_repeat Simple_repeat 2 59 0 229 266 31 0 chr17 82871693 82871757 -6632796 + MLT1K LTR MaLR 523 588 0 492 341 37 41 chr17 82871759 82872029 -6632524 + L1MC4a LINE L1 4961 5229 -917 3302 104 6 8 chr17 82872029 82872517 -6632036 + LTR15 LTR ERV1 1 487 -6 334 308 164 9 chr17 82872557 82872898 -6631655 + L1MC4a LINE L1 5255 5648 -2160 276 309 67 0 chr17 82872941 82873090 -6631463 + L1MC4a LINE L1 5753 5911 -1897 230 114 0 23 chr17 82873092 82873136 -6631417 + (TA)n Simple_repeat Simple_repeat 1 43 0 311 273 0 40 chr17 82873166 82873265 -6631288 - L1MC4 LINE L1 -1333 6709 6615 * 314 244 33 44 chr17 82873257 82873347 -6631206 - L1MC4 LINE L1 -1338 6704 6616 398 88 15 0 chr17 82873351 82873419 -6631134 + (TCTA)n Simple_repeat Simple_repeat 3 71 0 701 238 219 9 chr17 82873425 82873635 -6630918 + MIR SINE MIR 4 257 -5 2161 95 37 10 chr17 82873812 82874106 -6630447 + AluSx SINE Alu 1 302 -10 194 267 148 20 chr17 82875111 82875212 -6629341 + MIR SINE MIR 70 183 -79 433 314 105 0 chr17 82875322 82875532 -6629021 - MIR SINE MIR 0 262 31 856 120 8 45 chr17 82875538 82875671 -6628882 - FLAM_C SINE Alu -5 128 1 2328 91 10 0 chr17 82875680 82875978 -6628575 - AluSc SINE Alu -8 301 1 1578 163 36 33 chr17 82877056 82877357 -6627196 - AluJo SINE Alu -10 302 1 448 178 78 23 chr17 82877564 82877693 -6626860 - LTR37A LTR ERV1 0 426 291 1924 250 59 46 chr17 82877719 82878251 -6626302 - L1M4 LINE L1 -4833 2022 1520 1446 190 67 35 chr17 82878251 82878535 -6626018 - AluJo SINE Alu -19 293 1 1924 250 59 46 chr17 82878535 82878873 -6625680 - L1M4 LINE L1 -5335 1520 1188 2493 91 0 0 chr17 82878880 82879189 -6625364 - AluSc SINE Alu 0 309 1 1420 251 104 33 chr17 82879200 82879582 -6624971 - L1M4 LINE L1 -6363 496 75 2069 135 0 0 chr17 82879582 82879890 -6624663 + AluJb SINE Alu 1 308 0 1420 251 104 33 chr17 82879890 82879957 -6624596 - L1M4 LINE L1 -6784 75 14 1116 299 51 25 chr17 82880019 82880450 -6624103 - LTR47B LTR ERVL 0 443 2 272 133 24 24 chr17 82880475 82880557 -6623996 - Zaphod DNA AcHobo -3227 804 723 395 171 145 0 chr17 82880557 82880633 -6623920 - Tigger1 DNA MER2_type -1 2417 2331 516 117 0 29 chr17 82880656 82880759 -6623794 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 2204 131 0 0 chr17 82880759 82881071 -6623482 - AluSq SINE Alu -1 312 1 347 120 0 27 chr17 82881072 82881147 -6623406 + Tigger1 DNA MER2_type 2219 2291 -127 664 143 34 27 chr17 82881206 82881353 -6623200 + Tigger1 DNA MER2_type 1881 2028 -390 1214 119 0 0 chr17 82881375 82881572 -6622981 - AluSg/x SINE Alu 0 320 124 1162 139 0 0 chr17 82881891 82882064 -6622489 + AluSq SINE Alu 137 309 -4 2904 49 0 25 chr17 82882203 82882568 -6621985 - L1PA8 LINE L1 -13 6159 5804 239 330 0 0 chr17 82882884 82882978 -6621575 + CT-rich Low_complexity Low_complexity 2 95 0 4101 111 30 0 chr17 82883251 82883874 -6620679 - Tigger1 DNA MER2_type -527 1891 1250 2224 120 3 0 chr17 82883877 82884178 -6620375 + AluY SINE Alu 1 302 -9 2213 121 20 3 chr17 82884186 82884492 -6620061 + AluSx SINE Alu 1 311 -1 1000 168 15 20 chr17 82884506 82884703 -6619850 - Tigger1 DNA MER2_type -2222 196 1 744 195 19 0 chr17 82884706 82884860 -6619693 - Zaphod DNA AcHobo -3307 724 568 766 192 0 0 chr17 82884871 82885001 -6619552 - AluJo SINE Alu -176 136 7 310 269 118 0 chr17 82885007 82885100 -6619453 - Zaphod DNA AcHobo -3457 574 471 2471 80 3 0 chr17 82885101 82885400 -6619153 + AluSq SINE Alu 1 300 -13 1255 110 0 0 chr17 82885401 82885565 -6618988 + AluSg/x SINE Alu 135 298 -14 1263 259 53 0 chr17 82885570 82885890 -6618663 - Zaphod DNA AcHobo -3577 454 118 2635 58 0 0 chr17 82885900 82886209 -6618344 - AluY SINE Alu -2 309 1 2411 106 0 0 chr17 82886351 82886652 -6617901 - AluSx SINE Alu -11 301 1 2257 112 0 3 chr17 82886655 82886949 -6617604 - AluSx SINE Alu -17 295 3 807 97 0 0 chr17 82887479 82887582 -6616971 + U6 snRNA snRNA 1 103 -4 294 177 16 16 chr17 82887621 82887683 -6616870 + MER67C LTR ERV1 649 710 0 374 246 293 11 chr17 82887683 82887818 -6616735 - L2 LINE L2 -42 3271 3175 1818 153 0 4 chr17 82887818 82888099 -6616454 + AluJo SINE Alu 1 280 -32 195 42 0 0 chr17 82888099 82888123 -6616430 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 374 246 293 11 chr17 82888123 82888177 -6616376 - L2 LINE L2 -137 3176 3027 804 152 197 0 chr17 82888215 82888393 -6616160 - MSTB LTR MaLR -40 386 174 2381 99 0 0 chr17 82888393 82888696 -6615857 - AluSx SINE Alu -9 303 1 1653 158 16 31 chr17 82890017 82890129 -6614424 + AluSx SINE Alu 1 113 -199 2019 154 0 0 chr17 82890129 82890440 -6614113 - AluSx SINE Alu -1 311 1 1653 158 16 31 chr17 82890440 82890644 -6613909 + AluSx SINE Alu 113 312 0 2120 120 3 0 chr17 82891634 82891934 -6612619 - AluSx SINE Alu -11 301 1 1704 215 65 36 chr17 82892041 82892561 -6611992 + L1MC4 LINE L1 7508 8042 0 2209 115 3 10 chr17 82892576 82892890 -6611663 + AluSx SINE Alu 1 312 0 272 277 108 82 chr17 82892917 82893333 -6611220 + L1MC4 LINE L1 7058 7462 -499 2456 62 3 3 chr17 82893333 82893642 -6610911 + AluSp SINE Alu 1 309 -4 272 277 108 82 chr17 82893642 82893759 -6610794 + L1MC4 LINE L1 7462 7575 -386 1579 135 104 0 chr17 82893759 82894018 -6610535 - AluSg SINE Alu -20 290 5 272 277 108 82 chr17 82894018 82894104 -6610449 + L1MC4 LINE L1 7575 7690 -271 1365 169 96 15 chr17 82894105 82894377 -6610176 - AluJo SINE Alu -10 302 9 2180 113 13 3 chr17 82894388 82894697 -6609856 - AluSx SINE Alu 0 312 1 647 232 205 78 chr17 82894855 82895136 -6609417 - MER34B LTR ERV1 -148 417 76 2204 102 0 7 chr17 82895136 82895441 -6609112 - AluSx SINE Alu -9 303 1 647 232 205 78 chr17 82895441 82895529 -6609024 - MER34B LTR ERV1 -489 76 1 249 305 49 0 chr17 82895533 82895615 -6608938 + LTR16A LTR ERVL 359 444 -6 377 236 123 0 chr17 82895625 82895731 -6608822 + HERV16 LTR ERVL 5 123 -4873 1737 180 0 49 chr17 82896027 82896232 -6608321 - AluJo SINE Alu 0 312 127 234 0 0 0 chr17 82896232 82896258 -6608295 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1737 180 0 49 chr17 82896258 82896380 -6608173 - AluJo SINE Alu -185 127 1 436 207 12 0 chr17 82896380 82896462 -6608091 - FLAM SINE Alu -11 132 50 229 108 0 0 chr17 82896463 82896500 -6608053 - LTR61 LTR ERV1 0 595 559 2260 107 0 0 chr17 82896721 82897030 -6607523 - AluSg SINE Alu -1 309 1 258 275 81 46 chr17 82897121 82897530 -6607023 - L1ME LINE L1 -420 5744 5326 245 238 0 109 chr17 82897638 82897696 -6606857 - MER34 LTR ERV1 -452 90 46 1517 156 34 37 chr17 82897696 82897991 -6606562 - AluJo SINE Alu -18 294 1 245 238 0 109 chr17 82897991 82898033 -6606520 - MER34 LTR ERV1 -496 46 1 1316 137 8 69 chr17 82898033 82898142 -6606411 - L1MB3 LINE L1 -71 6112 5998 2212 106 0 0 chr17 82898142 82898443 -6606110 + AluSx SINE Alu 1 301 -11 1316 137 8 69 chr17 82898443 82898595 -6605958 - L1MB3 LINE L1 -185 5998 5867 363 289 62 8 chr17 82898816 82898944 -6605609 + MIR SINE MIR 2 136 -126 792 237 23 6 chr17 82898944 82899117 -6605436 + AluJo SINE Alu 122 297 -15 422 283 37 26 chr17 82899292 82899483 -6605070 + LTR16A LTR ERVL 257 449 -1 1975 118 34 3 chr17 82899531 82899827 -6604726 + AluSx SINE Alu 1 305 -7 2098 124 0 0 chr17 82899947 82900245 -6604308 + AluSx SINE Alu 1 298 -14 4031 138 35 86 chr17 82900339 82900785 -6603768 - L1MB8 LINE L1 -10 6168 5794 1789 128 6 67 chr17 82900785 82901098 -6603455 - AluSx SINE Alu -18 294 1 4031 138 35 86 chr17 82901098 82901590 -6602963 - L1MB8 LINE L1 -384 5794 5278 234 0 0 0 chr17 82902557 82902583 -6601970 + (TG)n Simple_repeat Simple_repeat 2 27 0 249 59 0 0 chr17 82902799 82902833 -6601720 + Alu SINE Alu 1 34 -266 986 263 138 41 chr17 82903416 82903907 -6600646 + L1MC4a LINE L1 5318 5856 -1952 457 269 47 13 chr17 82904243 82904392 -6600161 - LTR16A LTR ERVL -179 271 118 790 247 183 85 chr17 82905773 82906291 -6598262 + MLT1L LTR MaLR 20 588 0 1890 81 12 0 chr17 82906552 82906798 -6597755 - AluSx SINE Alu -3 309 61 1853 106 98 0 chr17 82907644 82907918 -6596635 + AluSx SINE Alu 1 301 -11 939 163 42 0 chr17 82907927 82908093 -6596460 + AluJb SINE Alu 134 306 -6 2153 104 3 0 chr17 82908174 82908472 -6596081 + AluSx SINE Alu 1 299 -13 294 225 38 25 chr17 82909385 82909465 -6595088 + MER91A DNA MER1_type 116 196 0 1909 158 23 0 chr17 82910176 82910479 -6594074 + AluJb SINE Alu 1 310 -2 545 311 62 5 chr17 82914346 82914555 -6589998 - MER58A DNA MER1_type -3 221 1 2106 98 0 44 chr17 82917360 82917677 -6586876 + AluSx SINE Alu 1 303 -9 2054 92 0 46 chr17 82920228 82920556 -6583997 - AluSq SINE Alu 0 313 1 235 310 58 0 chr17 82920776 82920863 -6583690 + L1ME LINE L1 5614 5705 -416 2088 117 3 13 chr17 82920888 82921196 -6583357 + AluSx SINE Alu 1 305 -7 1214 168 5 5 chr17 82921591 82921793 -6582760 + AluJo SINE Alu 1 202 -110 1158 132 0 0 chr17 82921868 82922035 -6582518 - AluJb SINE Alu -9 303 137 229 229 21 0 chr17 82922035 82922083 -6582470 + MER21B LTR ERV1 42 90 -773 2399 248 98 41 chr17 82922105 82922894 -6581659 + MER21B LTR ERV1 19 852 -11 263 265 132 0 chr17 82923057 82923125 -6581428 - L2 LINE L2 -89 3183 3107 848 194 19 6 chr17 82923232 82923392 -6581161 + AluJb SINE Alu 137 298 -14 2266 83 10 0 chr17 82923416 82923716 -6580837 - AluSp SINE Alu -10 303 1 2029 108 13 38 chr17 82924351 82924667 -6579886 + AluSg SINE Alu 1 308 -2 1740 137 25 7 chr17 82924727 82925038 -6579515 + AluJb SINE Alu 1 316 0 1243 203 8 4 chr17 82925748 82926009 -6578544 - AluJb SINE Alu -10 302 41 1974 87 0 8 chr17 82926059 82926352 -6578201 + AluSq SINE Alu 21 311 0 561 240 80 0 chr17 82926366 82926516 -6578037 + Tigger8 DNA MER2_type 235 396 -270 225 0 0 0 chr17 82926517 82926542 -6578011 + (TG)n Simple_repeat Simple_repeat 1 25 0 230 322 67 22 chr17 82926723 82926903 -6577650 - L2 LINE L2 -176 3096 2909 2014 119 0 7 chr17 82926974 82927283 -6577270 + AluSx SINE Alu 1 307 0 1748 174 3 3 chr17 82927401 82927712 -6576841 + AluJo SINE Alu 1 311 -1 1901 177 22 57 chr17 82928201 82928603 -6575950 + MLT1B LTR MaLR 3 390 0 338 269 10 10 chr17 82929048 82929152 -6575401 + GA-rich Low_complexity Low_complexity 1 104 0 2267 91 7 3 chr17 82929876 82930184 -6574369 - AluSx SINE Alu -3 309 1 1695 176 0 3 chr17 82930320 82930609 -6573944 - AluJo SINE Alu -24 288 1 2051 85 10 49 chr17 82931121 82931426 -6573127 - AluSx SINE Alu -10 302 10 261 286 52 0 chr17 82931531 82931608 -6572945 - L3 LINE CR1 -100 1477 1397 1446 185 0 4 chr17 82933388 82933648 -6570905 + AluJo SINE Alu 1 259 -53 231 36 0 0 chr17 82933653 82933681 -6570872 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 82933680 82933702 -6570851 + (GAA)n Simple_repeat Simple_repeat 2 23 0 * 1818 143 3 11 chr17 82933731 82934018 -6570535 + AluSx SINE Alu 1 285 -27 249 83 0 0 chr17 82934018 82934054 -6570499 + (TA)n Simple_repeat Simple_repeat 2 37 0 671 164 0 0 chr17 82934175 82934279 -6570274 + AluJb SINE Alu 183 286 -26 1682 172 7 0 chr17 82934503 82934782 -6569771 + AluJb SINE Alu 1 281 -31 641 130 0 0 chr17 82934798 82934890 -6569663 - HY4 scRNA scRNA 0 93 2 1082 111 12 23 chr17 82935114 82935285 -6569268 + AluSg/x SINE Alu 133 301 -9 2576 40 0 0 chr17 82935364 82935668 -6568885 - AluY SINE Alu -7 304 1 2044 112 14 0 chr17 82935682 82935968 -6568585 + AluSq SINE Alu 17 306 -7 1729 225 24 11 chr17 82936673 82937042 -6567511 + MLT1A2 LTR MaLR 1 374 0 990 238 84 48 chr17 82937968 82938422 -6566131 - L1MC4 LINE L1 -1 8041 7572 2450 81 7 3 chr17 82938456 82938765 -6565788 - AluSx SINE Alu 0 312 3 50 87 0 0 chr17 82941896 82942023 -6562530 + GC_rich Low_complexity Low_complexity 1 127 0 247 172 21 65 chr17 82942155 82942248 -6562305 + (CCCCG)n Simple_repeat Simple_repeat 2 90 0 2193 105 7 7 chr17 82943345 82943640 -6560913 - AluSx SINE Alu -17 295 1 23 0 0 0 chr17 82943640 82943663 -6560890 + AT_rich Low_complexity Low_complexity 1 23 0 1112 177 0 0 chr17 82943680 82943855 -6560698 - FAM SINE Alu 0 175 1 2132 120 17 0 chr17 82944270 82944561 -6559992 - AluSx SINE Alu -16 296 1 185 167 130 37 chr17 82945126 82945180 -6559373 + L2 LINE L2 3214 3272 -41 964 139 0 21 chr17 82945968 82946112 -6558441 - FLAM_C SINE Alu -2 141 1 799 175 0 0 chr17 82948390 82948510 -6556043 - FLAM_C SINE Alu -12 121 2 1826 146 6 44 chr17 82948723 82948872 -6555681 + AluJb SINE Alu 1 133 -179 2364 107 0 7 chr17 82948872 82949180 -6555373 + AluSg SINE Alu 1 306 -4 1826 146 6 44 chr17 82949180 82949345 -6555208 + AluJb SINE Alu 133 303 -9 2169 142 0 0 chr17 82950457 82950752 -6553801 - AluSx SINE Alu -17 295 1 2219 78 0 72 chr17 82951003 82951323 -6553230 + AluSq SINE Alu 1 297 -16 819 191 65 0 chr17 82953252 82953420 -6551133 + MER58A DNA MER1_type 46 224 0 568 176 78 0 chr17 82953599 82953701 -6550852 + FLAM_C SINE Alu 2 111 -32 2248 123 3 3 chr17 82953727 82954036 -6550517 + AluSx SINE Alu 1 309 -3 2302 112 3 0 chr17 82954113 82954409 -6550144 - AluSx SINE Alu -15 297 1 2427 77 0 3 chr17 82954604 82954903 -6549650 - AluY SINE Alu -12 299 2 2071 122 17 3 chr17 82955290 82955584 -6548969 - AluSx SINE Alu -14 298 1 2391 96 3 6 chr17 82955699 82956012 -6548541 + AluSx SINE Alu 1 312 0 572 198 130 31 chr17 82956062 82956224 -6548329 + MER5B DNA MER1_type 1 178 0 2368 88 10 0 chr17 82956290 82956597 -6547956 + AluSp SINE Alu 1 310 -3 213 65 0 0 chr17 82957951 82957982 -6546571 + (CCCCG)n Simple_repeat Simple_repeat 3 33 0 744 117 10 0 chr17 82958559 82958662 -6545891 - AluJb SINE Alu -207 105 2 966 142 37 0 chr17 82958890 82959052 -6545501 - FRAM SINE Alu -8 168 1 1586 147 23 0 chr17 82959160 82959418 -6545135 + AluJo SINE Alu 40 303 -9 525 189 11 0 chr17 82959470 82959560 -6544993 - FRAM SINE Alu -82 94 4 2363 94 7 0 chr17 82959576 82959874 -6544679 - AluSx SINE Alu -12 300 1 2369 77 0 19 chr17 82959951 82960262 -6544291 - AluY SINE Alu -6 305 1 2151 75 43 7 chr17 82960263 82960544 -6544009 - AluSx SINE Alu -21 291 1 188 274 292 9 chr17 82960560 82960673 -6543880 + L2 LINE L2 3164 3308 -5 2320 96 10 0 chr17 82961173 82961466 -6543087 + AluSx SINE Alu 1 296 -16 889 155 0 0 chr17 82961486 82961615 -6542938 + FLAM_C SINE Alu 3 131 -2 331 153 111 28 chr17 82961616 82961688 -6542865 + MER58A DNA MER1_type 146 223 -1 1184 180 100 59 chr17 82961782 82961850 -6542703 - MLT1A1 LTR MaLR -10 355 291 2232 103 0 13 chr17 82961850 82961985 -6542568 + AluSx SINE Alu 2 137 -175 2634 33 0 13 chr17 82961985 82962289 -6542264 + AluY SINE Alu 1 300 -11 2232 103 0 13 chr17 82962289 82962453 -6542100 + AluSx SINE Alu 137 297 -15 1184 180 100 59 chr17 82962453 82962723 -6541830 - MLT1A1 LTR MaLR -74 291 3 1936 101 50 44 chr17 82963239 82963384 -6541169 + AluSx SINE Alu 1 144 -168 2162 87 31 7 chr17 82963384 82963672 -6540881 + AluSp SINE Alu 1 295 -18 1936 101 50 44 chr17 82963672 82963823 -6540730 + AluSx SINE Alu 144 299 -13 216 189 0 0 chr17 82966541 82966578 -6537975 + A-rich Low_complexity Low_complexity 4 40 0 26 50 0 0 chr17 82967671 82967711 -6536842 + GC_rich Low_complexity Low_complexity 1 40 0 25 51 0 0 chr17 82967904 82967943 -6536610 + GC_rich Low_complexity Low_complexity 1 39 0 257 243 0 29 chr17 82970430 82970500 -6534053 + MIR SINE MIR 195 262 0 371 149 81 11 chr17 82970742 82970829 -6533724 - L1MA8 LINE L1 -4 6287 6195 2417 70 0 25 chr17 82971048 82971364 -6533189 + AluY SINE Alu 1 308 -3 597 302 61 13 chr17 82971628 82971865 -6532688 + MIR SINE MIR 1 229 -33 1999 109 0 46 chr17 82972655 82972958 -6531595 + AluJb SINE Alu 1 289 -23 2283 93 0 20 chr17 82973665 82973967 -6530586 - AluSg SINE Alu -14 296 1 33 25 0 0 chr17 82974488 82974528 -6530025 + AT_rich Low_complexity Low_complexity 1 40 0 2130 119 7 0 chr17 82974775 82975078 -6529475 - AluSp SINE Alu -8 305 1 263 247 41 93 chr17 82975835 82975932 -6528621 + MIR SINE MIR 41 132 -76 2509 145 58 9 chr17 82976519 82976968 -6527585 + Tigger1 DNA MER2_type 5 475 -1943 914 79 205 0 chr17 82976968 82977133 -6527420 - AluSg/x SINE Alu 0 323 133 6074 117 26 0 chr17 82977142 82978075 -6526478 + Tigger1 DNA MER2_type 487 1443 -975 1292 90 0 6 chr17 82978077 82978243 -6526310 - AluSg/x SINE Alu -17 295 131 819 129 27 27 chr17 82978243 82978390 -6526163 + Tigger1 DNA MER2_type 1443 1589 -829 732 149 0 0 chr17 82978396 82978503 -6526050 + AluJb SINE Alu 2 108 -204 2362 99 0 0 chr17 82978503 82978795 -6525758 - AluSg SINE Alu -17 293 2 326 250 168 47 chr17 82979080 82979336 -6525217 - L2 LINE L2 -5 3308 3022 1848 154 14 7 chr17 82979569 82979861 -6524692 + AluJo SINE Alu 1 294 -18 308 234 7 21 chr17 82979955 82980100 -6524453 + CT-rich Low_complexity Low_complexity 1 143 0 231 222 42 28 chr17 82980138 82980210 -6524343 - L2 LINE L2 -76 3237 3165 741 147 0 77 chr17 82980219 82980375 -6524178 - L1MB8 LINE L1 -6 6172 6029 1628 186 0 28 chr17 82980431 82980722 -6523831 + AluJb SINE Alu 27 309 -3 2331 101 0 0 chr17 82980773 82981070 -6523483 + AluSg SINE Alu 1 297 -13 383 204 23 11 chr17 82981190 82981278 -6523275 - L2 LINE L2 -536 2778 2690 2416 52 41 0 chr17 82981528 82981819 -6522734 - AluY SINE Alu -8 303 1 2075 103 11 0 chr17 82981971 82982243 -6522310 - AluSx SINE Alu -16 296 22 2401 78 3 3 chr17 82982272 82982567 -6521986 + AluY SINE Alu 1 295 -16 1801 148 16 32 chr17 82982579 82982889 -6521664 + AluJb SINE Alu 5 309 -3 467 283 168 4 chr17 82982951 82983138 -6521415 - MIR SINE MIR -52 156 10 1842 104 64 60 chr17 82983561 82983859 -6520694 - AluSx SINE Alu -13 299 1 823 59 29 0 chr17 82984075 82984177 -6520376 + U6 snRNA snRNA 1 105 -2 1829 154 3 49 chr17 82984554 82984879 -6519674 + AluJb SINE Alu 1 310 -2 2297 107 0 3 chr17 82985564 82985863 -6518690 + AluSx SINE Alu 1 298 -14 444 245 36 132 chr17 82985923 82986099 -6518454 - MIR SINE MIR 0 262 115 2107 120 20 0 chr17 82986099 82986391 -6518162 + AluSq SINE Alu 1 298 -15 444 245 36 132 chr17 82986391 82986465 -6518088 - MIR SINE MIR -147 115 35 379 346 0 0 chr17 82986847 82986951 -6517602 + L1MC4 LINE L1 6600 6703 -1339 347 287 0 43 chr17 82986869 82986963 -6517590 - L1MC4 LINE L1 -1339 6703 6614 * 2539 91 0 0 chr17 82986976 82987285 -6517268 - AluSp SINE Alu -2 311 3 2296 106 0 3 chr17 82987286 82987587 -6516966 - AluSx SINE Alu -12 300 1 2320 106 3 0 chr17 82987742 82988044 -6516509 + AluSx SINE Alu 1 303 -9 2349 101 0 7 chr17 82988892 82989190 -6515363 + AluSg1 SINE Alu 1 296 -13 338 242 56 93 chr17 82989326 82989461 -6515092 + L1 LINE L1 4905 5035 -1111 1903 164 3 10 chr17 82989461 82989766 -6514787 + AluJb SINE Alu 1 303 -9 338 242 56 93 chr17 82989766 82989791 -6514762 + L1 LINE L1 5035 5059 -1087 1965 139 40 86 chr17 82989956 82990126 -6514427 - Tigger2a DNA MER2_type -2275 433 257 1669 157 29 58 chr17 82990126 82990439 -6514114 + AluJo SINE Alu 1 304 -8 1962 116 3 85 chr17 82990443 82990614 -6513939 - AluSx SINE Alu -9 303 168 2145 128 0 10 chr17 82990614 82990920 -6513633 - AluY SINE Alu -8 303 1 1962 116 3 85 chr17 82990920 82991066 -6513487 - AluSx SINE Alu -144 168 12 1965 139 40 86 chr17 82991066 82991149 -6513404 - Tigger2a DNA MER2_type -2454 254 169 2142 87 22 51 chr17 82991149 82991461 -6513092 + AluSq SINE Alu 1 303 -10 1965 139 40 86 chr17 82991461 82991655 -6512898 - Tigger2a DNA MER2_type -2539 169 1 2118 122 3 29 chr17 82991682 82991993 -6512560 - AluSq SINE Alu -10 303 1 2084 121 0 7 chr17 82992087 82992368 -6512185 + AluSg SINE Alu 1 279 -31 404 241 181 34 chr17 82992378 82992644 -6511909 + L1ME4a LINE L1 5528 5832 -289 719 202 56 120 chr17 82992782 82992804 -6511749 - L1MB7 LINE L1 -19 6165 6143 2600 47 3 0 chr17 82992804 82993100 -6511453 + AluY SINE Alu 1 297 -14 719 202 56 120 chr17 82993100 82993488 -6511065 - L1MB7 LINE L1 -41 6143 5715 2722 104 46 74 chr17 82993488 82993619 -6510934 - LTR22B LTR ERVK -4 488 355 1807 45 50 5 chr17 82993619 82993840 -6510713 + AluY SINE Alu 72 302 -9 2722 104 46 74 chr17 82993840 82994206 -6510347 - LTR22B LTR ERVK -137 355 5 719 202 56 120 chr17 82994206 82994408 -6510145 - L1MB7 LINE L1 -469 5715 5502 2259 124 3 0 chr17 82994420 82994727 -6509826 - AluSx SINE Alu -4 308 1 1911 174 101 101 chr17 82994727 82994965 -6509588 - L1MB7 LINE L1 -804 5342 5105 5064 122 28 17 chr17 82994965 82995022 -6509531 - L1MA9 LINE L1 -5 6307 6252 1930 160 20 7 chr17 82995022 82995322 -6509231 - AluSx SINE Alu -8 304 1 5064 122 28 17 chr17 82995322 82995850 -6508703 - L1MA9 LINE L1 -60 6252 5708 183 80 0 0 chr17 82995850 82995875 -6508678 + (CA)n Simple_repeat Simple_repeat 2 26 0 5064 122 28 17 chr17 82995875 82996162 -6508391 - L1MA9 LINE L1 -604 5708 5425 1911 174 101 101 chr17 82996162 82996616 -6507937 - L1MB7 LINE L1 -1041 5105 4647 1947 152 30 7 chr17 82996616 82996919 -6507634 - AluJb SINE Alu -2 310 1 1911 174 101 101 chr17 82996919 82996950 -6507603 - L1MB7 LINE L1 -1498 4648 4618 1246 183 55 11 chr17 82996962 82997235 -6507318 - L1MC1 LINE L1 0 6333 6049 2342 110 0 7 chr17 82997299 82997609 -6506944 + AluSx SINE Alu 1 308 -4 23 0 0 0 chr17 82997611 82997634 -6506919 + AT_rich Low_complexity Low_complexity 1 23 0 253 268 84 16 chr17 82998022 82998146 -6506407 + MER5A DNA MER1_type 24 164 -25 475 269 121 82 chr17 82998641 82999106 -6505447 - MLT1H LTR MaLR -12 537 22 1903 151 3 13 chr17 82999185 82999489 -6505064 + AluJb SINE Alu 1 301 -11 2465 77 0 3 chr17 82999674 82999985 -6504568 - AluY SINE Alu -1 310 1 1897 141 43 33 chr17 83000610 83000914 -6503639 + AluJb SINE Alu 1 307 -5 2364 91 7 10 chr17 83000914 83001221 -6503332 + AluSc SINE Alu 1 306 -3 308 285 5 70 chr17 83001585 83001771 -6502782 + MER5B DNA MER1_type 5 178 0 2223 76 0 79 chr17 83002348 83002665 -6501888 - AluY SINE Alu -19 292 1 2159 109 4 0 chr17 83002666 83002940 -6501613 - AluSg SINE Alu -35 275 1 580 286 24 29 chr17 83002948 83003138 -6501415 - MIR SINE MIR -39 223 33 1961 179 28 18 chr17 83003138 83003530 -6501023 - MSTD LTR MaLR 0 396 1 580 286 24 29 chr17 83003530 83003549 -6501004 - MIR SINE MIR -229 33 15 2111 87 4 0 chr17 83003860 83004114 -6500439 + AluSp SINE Alu 1 255 -58 381 306 197 0 chr17 83004764 83004947 -6499606 - MIR SINE MIR -40 222 4 229 380 44 10 chr17 83005100 83005207 -6499346 + L3 LINE CR1 1347 1449 -128 2220 104 13 3 chr17 83005207 83005505 -6499048 + AluSx SINE Alu 2 302 -10 229 380 44 10 chr17 83005505 83005602 -6498951 + L3 LINE CR1 1449 1558 -19 2559 80 0 6 chr17 83005710 83006024 -6498529 + AluSq SINE Alu 1 312 -1 2208 118 3 0 chr17 83006093 83006390 -6498163 - AluSq SINE Alu -15 298 1 1562 177 32 29 chr17 83006807 83007117 -6497436 - AluJo SINE Alu -1 311 1 622 245 95 84 chr17 83007387 83007757 -6496796 - MLT1B LTR MaLR 0 626 17 2649 40 0 0 chr17 83008103 83008403 -6496150 + AluY SINE Alu 1 300 -11 2228 113 7 0 chr17 83009141 83009433 -6495120 - AluSx SINE Alu -18 294 1 272 254 14 0 chr17 83010939 83011010 -6493543 - MIR SINE MIR -114 148 77 2388 101 0 0 chr17 83011471 83011767 -6492786 - AluSx SINE Alu -16 296 1 1238 155 104 46 chr17 83011792 83012269 -6492284 - MLT1F1 LTR MaLR 0 567 1 410 160 277 0 chr17 83014814 83014933 -6489620 + MER20 DNA MER1_type 68 219 0 1343 150 142 58 chr17 83016230 83016504 -6488049 - AluJb SINE Alu -15 297 1 193 320 50 20 chr17 83016586 83016686 -6487867 + MIR SINE MIR 47 149 -113 653 112 131 0 chr17 83018398 83018505 -6486048 - THE1B LTR MaLR -49 315 195 366 206 0 54 chr17 83018555 83018647 -6485906 + FLAM_A SINE Alu 47 133 0 1926 128 30 26 chr17 83018655 83018995 -6485558 + AluSx SINE Alu 1 312 0 26 0 0 0 chr17 83018995 83019021 -6485532 + AT_rich Low_complexity Low_complexity 1 26 0 1841 125 80 14 chr17 83019021 83019362 -6485191 + AluSc SINE Alu 2 309 0 225 261 0 0 chr17 83019548 83019594 -6484959 - MER112 DNA MER1_type -21 239 194 2906 13 0 3 chr17 83020468 83020781 -6483772 - AluYb8 SINE Alu -6 312 1 192 158 0 0 chr17 83021320 83021358 -6483195 + A-rich Low_complexity Low_complexity 1 38 0 2328 83 3 3 chr17 83022086 83022376 -6482177 - AluSp SINE Alu -19 294 5 1090 91 62 108 chr17 83022501 83022742 -6481811 - MER30 DNA MER1_type 0 230 1 368 277 34 34 chr17 83022780 83022899 -6481654 + MER5A DNA MER1_type 70 188 -1 312 215 25 13 chr17 83022994 83023073 -6481480 - MER20 DNA MER1_type -2 217 138 198 0 0 0 chr17 83023073 83023095 -6481458 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 2077 96 0 26 chr17 83023095 83023366 -6481187 - AluSq SINE Alu -34 279 16 211 250 86 95 chr17 83023460 83023576 -6480977 + MIR SINE MIR 72 186 -76 2051 96 75 0 chr17 83023584 83023865 -6480688 + AluSp SINE Alu 1 302 -11 205 269 0 45 chr17 83025091 83025158 -6479395 - MIR SINE MIR -74 188 125 1937 155 6 19 chr17 83026005 83026321 -6478232 - AluJo SINE Alu 0 312 1 2450 84 16 0 chr17 83026616 83026924 -6477629 - AluSp SINE Alu 0 313 1 23 33 0 0 chr17 83026926 83026956 -6477597 + AT_rich Low_complexity Low_complexity 1 30 0 885 243 63 13 chr17 83027223 83027326 -6477227 - MIR SINE MIR 0 262 166 3873 85 13 9 chr17 83027326 83027740 -6476813 + MER41A LTR ERV1 1 419 -135 2369 87 10 0 chr17 83027740 83028039 -6476514 - AluSx SINE Alu -10 302 1 3873 85 13 9 chr17 83028039 83028176 -6476377 + MER41A LTR ERV1 419 554 0 885 243 63 13 chr17 83028176 83028311 -6476242 - MIR SINE MIR -96 166 12 1783 169 6 22 chr17 83029166 83029479 -6475074 + AluJb SINE Alu 1 308 -4 601 320 63 4 chr17 83029647 83030070 -6474483 + MLT1L LTR MaLR 29 522 -93 376 298 9 23 chr17 83030090 83030196 -6474357 - L1MC4 LINE L1 -1339 6983 1986 2214 143 0 0 chr17 83030197 83030498 -6474055 - AluSq SINE Alu -12 301 1 236 183 50 17 chr17 83030499 83030559 -6473994 + MER104 DNA Tc2 37 98 -82 2505 68 0 16 chr17 83030581 83030889 -6473664 + AluY SINE Alu 1 303 -8 503 357 82 20 chr17 83031053 83031297 -6473256 - MIR SINE MIR -1 261 3 22 0 0 0 chr17 83031489 83031511 -6473042 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 83031704 83031735 -6472818 + AT_rich Low_complexity Low_complexity 1 31 0 488 244 63 35 chr17 83031998 83032251 -6472302 + MIR SINE MIR 2 262 0 1709 217 132 93 chr17 83032386 83032521 -6472032 - L1ME2 LINE L1 -15 6149 6021 2393 88 3 3 chr17 83032521 83032817 -6471736 + AluSq SINE Alu 4 299 -14 2389 119 0 0 chr17 83032824 83033136 -6471417 + AluSx SINE Alu 1 312 0 1709 217 132 93 chr17 83033136 83033690 -6470863 - L1ME2 LINE L1 -148 6016 5485 343 45 0 0 chr17 83033690 83033734 -6470819 - AluY SINE Alu -257 44 1 1709 217 132 93 chr17 83033734 83034028 -6470525 - L1ME2 LINE L1 -679 5485 4873 256 128 43 0 chr17 83034046 83034093 -6470460 - L1ME2 LINE L1 -1338 4808 4760 * 379 254 230 18 chr17 83034086 83034303 -6470250 - L1MC4 LINE L1 -6066 541 279 209 260 0 0 chr17 83034367 83034417 -6470136 - MIR3 SINE MIR -23 185 136 196 197 105 53 chr17 83034490 83034566 -6469987 - MIR SINE MIR -68 140 61 271 316 74 0 chr17 83034603 83034698 -6469855 + L2 LINE L2 3169 3270 -2 572 219 3 3 chr17 83034763 83035087 -6469466 + (TG)n Simple_repeat Simple_repeat 1 324 0 332 179 26 64 chr17 83035091 83035169 -6469384 + L1MCa LINE L1 1996 2070 -4356 648 157 11 7 chr17 83035169 83035449 -6469104 + (TG)n Simple_repeat Simple_repeat 1 281 0 555 280 160 0 chr17 83036133 83036333 -6468220 + MIR SINE MIR 31 262 0 278 26 26 0 chr17 83036607 83036646 -6467907 + (CA)n Simple_repeat Simple_repeat 1 40 0 627 280 73 13 chr17 83037300 83037532 -6467021 - MIR SINE MIR -11 251 6 536 293 80 0 chr17 83039452 83039640 -6464913 + MIR SINE MIR 10 212 -50 286 363 56 23 chr17 83040899 83041099 -6463454 + MIR SINE MIR 17 215 -47 200 343 123 7 chr17 83041168 83041314 -6463239 - MIR SINE MIR -78 184 22 205 238 0 0 chr17 83042130 83042172 -6462381 + G-rich Low_complexity Low_complexity 4 45 0 292 260 69 52 chr17 83043601 83043774 -6460779 - Charlie7 DNA MER1_type -6 2606 2431 219 69 0 0 chr17 83045351 83045380 -6459173 + (CA)n Simple_repeat Simple_repeat 1 29 0 253 148 0 74 chr17 83045398 83045506 -6459047 + (CCCCCG)n Simple_repeat Simple_repeat 5 104 0 212 147 0 0 chr17 83046039 83046073 -6458480 - MIR SINE MIR -116 146 113 345 278 172 0 chr17 83048372 83048523 -6456030 + MIR SINE MIR 37 213 -49 2113 131 0 6 chr17 83048601 83048988 -6455565 + AluSx SINE Alu 1 385 0 1550 153 30 30 chr17 83049031 83049326 -6455227 - AluJo SINE Alu -17 295 1 186 43 0 0 chr17 83049328 83049351 -6455202 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1727 175 7 0 chr17 83049351 83049637 -6454916 - AluJb SINE Alu -24 288 1 2254 101 0 16 chr17 83050243 83050549 -6454004 + AluSx SINE Alu 1 301 -11 212 351 54 34 chr17 83050786 83050991 -6453562 - L2 LINE L2 -414 2900 2692 341 296 98 23 chr17 83054223 83054355 -6450198 - MIR SINE MIR -65 143 9 310 228 51 25 chr17 83054894 83054973 -6449580 + L1MC3 LINE L1 6569 6649 -1136 * 318 218 0 0 chr17 83054920 83054975 -6449578 - L1MC4 LINE L1 -1333 6709 6655 2259 86 3 0 chr17 83056550 83056852 -6447701 + AluSx SINE Alu 1 303 -9 2512 40 0 0 chr17 83056852 83057148 -6447405 + AluY SINE Alu 1 296 -15 2145 98 0 3 chr17 83057313 83057622 -6446931 - AluSq SINE Alu 0 308 1 319 238 12 12 chr17 83058248 83058328 -6446225 + MIR SINE MIR 52 131 -77 225 250 0 40 chr17 83058467 83058498 -6446055 + GA-rich Low_complexity Low_complexity 1 32 -41 2306 79 0 52 chr17 83058498 83058827 -6445726 + AluSx SINE Alu 1 312 0 225 250 0 40 chr17 83058827 83058851 -6445702 + GA-rich Low_complexity Low_complexity 32 55 -18 2397 87 6 0 chr17 83058851 83059162 -6445391 + AluSq SINE Alu 1 313 0 225 250 0 40 chr17 83059162 83059181 -6445372 + GA-rich Low_complexity Low_complexity 55 73 0 870 188 0 0 chr17 83060082 83060231 -6444322 + FRAM SINE Alu 19 167 -9 2108 107 0 3 chr17 83060243 83060541 -6444012 + AluSc SINE Alu 1 297 -12 540 197 78 0 chr17 83060546 83060688 -6443865 + MER96B DNA MER1_type? 265 417 0 972 187 0 0 chr17 83060753 83060919 -6443634 - FRAM SINE Alu 0 166 1 772 113 0 0 chr17 83061127 83061233 -6443320 + AluSq/x SINE Alu 1 106 -206 1596 86 14 9 chr17 83061233 83061485 -6443068 + AluSx SINE Alu 63 315 0 1783 149 0 4 chr17 83062025 83062301 -6442252 - AluJb SINE Alu -36 276 2 2069 128 0 16 chr17 83062852 83063165 -6441388 - AluSx SINE Alu -4 308 1 692 165 0 0 chr17 83063187 83063296 -6441257 - FLAM_A SINE Alu -30 112 4 496 285 220 40 chr17 83063306 83063702 -6440851 - L2 LINE L2 -802 2512 2046 352 305 11 29 chr17 83063730 83063904 -6440649 + G-rich Low_complexity Low_complexity 4 174 0 2098 122 0 3 chr17 83064292 83064595 -6439958 + AluSg SINE Alu 1 302 -8 1757 184 33 33 chr17 83064600 83064965 -6439588 - MLT1A1 LTR MaLR 0 365 1 1190 153 0 0 chr17 83065670 83065846 -6438707 + AluJb SINE Alu 126 301 -11 1625 209 159 11 chr17 83066016 83066476 -6438077 - L1PA15-16 LINE L1 -5352 1497 970 320 0 25 0 chr17 83067332 83067372 -6437181 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 7103 56 0 2 chr17 83068754 83069930 -6434623 - L1P2 LINE L1 -582 5572 4400 443 116 0 0 chr17 83070030 83070099 -6434454 + MER41A LTR ERV1 486 554 0 1182 112 0 45 chr17 83070419 83070597 -6433956 + AluSx SINE Alu 58 227 -85 2261 93 3 16 chr17 83070757 83071070 -6433483 - AluSg SINE Alu -1 309 1 333 273 125 31 chr17 83071297 83071425 -6433128 + MIR3 SINE MIR 67 206 -2 1986 130 0 10 chr17 83071958 83072259 -6432294 + AluJb SINE Alu 3 300 -12 343 289 54 54 chr17 83072996 83073145 -6431408 + MIR SINE MIR 34 182 -80 519 143 0 0 chr17 83073922 83074006 -6430547 - L1M3 LINE L1 -402 5781 5698 2059 114 0 17 chr17 83074020 83074317 -6430236 - AluSx SINE Alu -16 296 5 331 271 0 35 chr17 83074327 83074412 -6430141 - L1MD3 LINE L1 -14 7981 7900 1097 176 26 26 chr17 83074418 83074685 -6429868 - L1MD3 LINE L1 0 7995 7729 423 305 85 40 chr17 83075830 83076030 -6428523 + L2 LINE L2 3065 3273 -40 248 180 0 0 chr17 83076509 83076559 -6427994 + MIR SINE MIR 103 152 -110 349 150 0 0 chr17 83076907 83076967 -6427586 - AluJ/FLAM SINE Alu -242 60 1 1605 83 10 0 chr17 83077315 83077520 -6427033 + AluSx SINE Alu 1 207 -105 2118 113 0 0 chr17 83079339 83079630 -6424923 - AluSx SINE Alu 0 312 22 2024 161 23 0 chr17 83079674 83080021 -6424532 - L1MB2 LINE L1 0 6171 5817 2098 93 9 46 chr17 83080024 83080347 -6424206 + AluSx SINE Alu 2 312 0 1936 151 10 10 chr17 83080359 83080671 -6423882 + AluJb SINE Alu 1 312 0 529 159 11 11 chr17 83080693 83080781 -6423772 + AluS SINE Alu 1 88 -225 1812 130 4 0 chr17 83080883 83081145 -6423408 + AluSx SINE Alu 39 301 -11 198 0 0 0 chr17 83081146 83081168 -6423385 + (CA)n Simple_repeat Simple_repeat 2 23 0 347 228 13 0 chr17 83081241 83081320 -6423233 + MER63 DNA MER1_type 672 751 -311 363 213 13 0 chr17 83081322 83081397 -6423156 + MER63 DNA MER1_type 980 1055 -7 516 146 55 0 chr17 83081438 83081548 -6423005 + MLT2B1 LTR ERVL 2 117 -403 2048 143 3 0 chr17 83081548 83081855 -6422698 + AluJb SINE Alu 1 308 -4 1218 166 63 18 chr17 83081855 83082139 -6422414 + MLT1D LTR MaLR 184 480 -25 303 287 62 39 chr17 83082152 83082281 -6422272 - MIR SINE MIR -111 151 20 1680 143 23 30 chr17 83082410 83082711 -6421842 + AluSx SINE Alu 1 299 -13 286 123 35 0 chr17 83082729 83082786 -6421767 + GA-rich Low_complexity Low_complexity 1 59 0 495 310 96 13 chr17 83082801 83083114 -6421439 + L1MEd LINE L1 92 430 -5689 265 242 40 20 chr17 83083111 83083210 -6421343 + L1MEd LINE L1 1153 1253 -4866 * 1497 271 58 13 chr17 83084196 83084643 -6419910 - MLT1C LTR MaLR 0 467 1 365 299 8 68 chr17 83085031 83085094 -6419459 - L1MEd LINE L1 -2010 4119 4054 962 107 15 0 chr17 83085094 83085225 -6419328 - FLAM_C SINE Alu 0 133 1 1773 122 100 4 chr17 83085235 83085505 -6419048 - AluSx SINE Alu -16 296 1 365 299 8 68 chr17 83085505 83085547 -6419006 - L1MEd LINE L1 -2084 4045 4010 270 167 15 0 chr17 83085553 83085619 -6418934 + Charlie1 DNA MER1_type 2201 2267 -494 243 305 100 80 chr17 83085671 83086625 -6417928 - L1MEd LINE L1 -2124 4005 3071 2110 119 0 0 chr17 83086625 83086938 -6417615 - AluSx SINE Alu 0 313 1 243 305 100 80 chr17 83086938 83086963 -6417590 - L1MEd LINE L1 -3058 3071 3048 589 147 0 49 chr17 83086963 83087065 -6417488 - FLAM_C SINE Alu -10 133 37 243 305 100 80 chr17 83087065 83087366 -6417187 - L1MEd LINE L1 -3081 3048 2754 1725 174 17 3 chr17 83087366 83087660 -6416893 + AluJo SINE Alu 5 302 -10 243 305 100 80 chr17 83087660 83088036 -6416517 - L1MEd LINE L1 -3375 2754 2203 2191 125 0 0 chr17 83088036 83088340 -6416213 + AluSg SINE Alu 1 304 -6 243 305 100 80 chr17 83088340 83088453 -6416100 - L1MEd LINE L1 -3926 2203 2094 1479 199 0 0 chr17 83088515 83088766 -6415787 - AluJb SINE Alu -8 304 54 335 179 67 10 chr17 83088913 83088998 -6415555 - MER58 DNA MER1_type -1 2419 2340 884 173 0 0 chr17 83088998 83089131 -6415422 - FLAM_C SINE Alu 0 133 1 335 179 67 10 chr17 83089131 83089150 -6415403 - MER58 DNA MER1_type -80 2340 101 471 316 55 75 chr17 83089259 83089536 -6415017 - L1MEd LINE L1 -795 1695 1414 2277 106 0 0 chr17 83089536 83089848 -6414705 - AluSx SINE Alu 0 312 1 471 316 55 75 chr17 83089848 83090451 -6414102 - L1MEd LINE L1 -1076 1414 756 1742 173 0 7 chr17 83090451 83090765 -6413788 - AluJo SINE Alu 0 312 1 471 316 55 75 chr17 83090765 83091247 -6413306 - L1MEd LINE L1 -1734 756 266 2059 98 22 0 chr17 83091514 83091815 -6412738 - AluSx SINE Alu 0 307 1 1735 146 3 17 chr17 83091817 83092119 -6412434 - AluJo SINE Alu -14 298 1 2263 113 0 0 chr17 83092399 83092710 -6411843 - AluSx SINE Alu -1 311 1 1981 106 3 36 chr17 83093268 83093614 -6410939 + AluSx SINE Alu 1 336 0 2016 113 0 10 chr17 83094273 83094575 -6409978 - AluJb SINE Alu -13 299 1 2382 64 0 0 chr17 83094584 83094881 -6409672 - AluY SINE Alu -14 297 1 2261 90 3 0 chr17 83094882 83095182 -6409371 - AluSx SINE Alu -11 301 1 225 132 0 0 chr17 83095203 83095241 -6409312 - LTR24C LTR ERV1 0 635 598 489 267 36 36 chr17 83095571 83095736 -6408817 + L2 LINE L2 3149 3313 0 1616 172 0 31 chr17 83096424 83096746 -6407807 - AluJb SINE Alu 0 313 1 183 80 0 0 chr17 83096746 83096771 -6407782 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 1103 176 164 0 chr17 83096778 83096877 -6407676 - L1PA16 LINE L1 0 6166 6085 698 10 0 39 chr17 83096877 83096980 -6407573 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 2060 106 3 0 chr17 83096980 83097257 -6407296 - AluSg SINE Alu -32 278 1 1103 176 164 0 chr17 83097257 83097417 -6407136 - L1PA16 LINE L1 -80 6086 5869 2321 58 0 38 chr17 83097424 83097737 -6406816 - AluY SINE Alu -10 301 1 2008 114 3 13 chr17 83097760 83098092 -6406461 - AluSx SINE Alu 0 329 1 291 325 0 0 chr17 83098136 83098219 -6406334 + MIR SINE MIR 78 160 -102 1201 273 61 72 chr17 83098247 83098458 -6406095 - MER77 LTR ERV1 -4 601 389 1957 135 0 0 chr17 83098458 83098773 -6405780 + AluSg SINE Alu 1 315 0 1201 273 61 72 chr17 83098773 83099198 -6405355 - MER77 LTR ERV1 -216 389 54 262 233 60 60 chr17 83099533 83099683 -6404870 - LTR58 LTR ERV1 -17 662 513 498 188 69 42 chr17 83099712 83099856 -6404697 - LTR43 LTR ERV1 -281 321 174 659 195 15 97 chr17 83100090 83100179 -6404374 - LTR39 LTR ERV1 -77 706 639 2030 85 4 4 chr17 83100179 83100472 -6404081 - AluSq SINE Alu 0 307 15 659 195 15 97 chr17 83100472 83100576 -6403977 - LTR39 LTR ERV1 -144 639 528 * 1755 157 48 51 chr17 83100571 83100966 -6403587 - LTR39 LTR ERV1 -388 395 2 2440 187 26 91 chr17 83101619 83101760 -6402793 - MER34B LTR ERV1 0 565 416 2279 77 0 0 chr17 83101760 83102047 -6402506 - AluSx SINE Alu 0 312 26 2440 187 26 91 chr17 83102047 83102509 -6402044 - MER34B LTR ERV1 -149 416 1 338 285 38 25 chr17 83102710 83102868 -6401685 + L1ME4a LINE L1 5961 6120 -1 2092 124 13 0 chr17 83102891 83103198 -6401355 - AluSx SINE Alu -1 311 1 1553 179 23 36 chr17 83104275 83104576 -6399977 - AluJo SINE Alu -15 297 1 884 103 14 41 chr17 83104699 83104845 -6399708 + AluSg/x SINE Alu 135 276 -34 321 305 62 9 chr17 83105343 83105531 -6399022 - MIR SINE MIR -13 195 48 382 281 97 0 chr17 83105689 83105803 -6398750 + MIR SINE MIR 48 172 -90 * 542 286 47 0 chr17 83105795 83105966 -6398587 - MER91A DNA MER1_type -17 179 1 2654 123 23 48 chr17 83106383 83106421 -6398132 - MSTA LTR MaLR 0 428 391 2636 19 7 3 chr17 83106421 83106731 -6397822 + AluY SINE Alu 1 311 0 2654 123 23 48 chr17 83106731 83106931 -6397622 - MSTA LTR MaLR -37 391 203 2182 113 0 3 chr17 83106931 83107241 -6397312 - AluSx SINE Alu -3 309 1 2654 123 23 48 chr17 83107241 83107440 -6397113 - MSTA LTR MaLR -225 203 1 767 214 33 0 chr17 83107616 83107798 -6396755 + MLT1D LTR MaLR 9 196 -309 523 277 103 37 chr17 83107867 83108109 -6396444 + MER21B LTR ERV1 388 645 -218 374 248 29 0 chr17 83108147 83108252 -6396301 - MER115 DNA AcHobo -581 112 5 2200 104 0 0 chr17 83109287 83109586 -6394967 - AluSq SINE Alu -14 299 1 610 144 7 86 chr17 83109960 83110099 -6394454 + FRAM SINE Alu 48 175 -1 2135 97 3 3 chr17 83110254 83110543 -6394010 + AluSx SINE Alu 7 295 -17 781 162 0 0 chr17 83110565 83110682 -6393871 + FLAM_C SINE Alu 2 118 -15 702 107 39 0 chr17 83110716 83110819 -6393734 + MER30 DNA MER1_type 124 230 0 944 248 21 17 chr17 83110864 83111102 -6393451 - LTR16A LTR ERVL -28 422 184 387 313 7 0 chr17 83111425 83111572 -6392981 + L1MEd LINE L1 28 175 -5944 2572 96 19 22 chr17 83111895 83112260 -6392293 - THE1B LTR MaLR 0 364 1 841 174 0 0 chr17 83112368 83112500 -6392053 - FLAM_A SINE Alu 0 133 2 2354 173 57 2 chr17 83112701 83113105 -6391448 + MSTB LTR MaLR 1 426 0 1420 235 35 51 chr17 83113190 83113585 -6390968 + MLT1B LTR MaLR 1 389 -1 547 259 19 104 chr17 83113850 83114159 -6390394 - HAL1 LINE L1 0 2507 2225 3402 182 197 15 chr17 83114808 83115735 -6388818 - MER52C LTR ERV1 -1 1277 1 547 220 37 0 chr17 83115736 83115845 -6388708 + MER81 DNA DNA 1 113 -1 710 298 39 61 chr17 83115863 83115982 -6388571 - HAL1 LINE L1 -700 1807 1687 2409 74 0 0 chr17 83115982 83116293 -6388260 + AluY SINE Alu 1 311 0 574 110 0 0 chr17 83116303 83116385 -6388168 + L1MA9 LINE L1 6226 6307 -5 710 298 39 61 chr17 83116385 83116989 -6387564 - HAL1 LINE L1 -829 1678 813 360 326 177 0 chr17 83117648 83117829 -6386724 - MIR SINE MIR 0 262 50 3597 80 108 4 chr17 83118266 83118768 -6385785 + MER41A LTR ERV1 1 554 0 3040 120 37 6 chr17 83118783 83119266 -6385287 + MER41E LTR ERV1 15 512 0 471 239 84 0 chr17 83119311 83119453 -6385100 - MIR SINE MIR -57 205 52 1795 179 152 41 chr17 83119541 83120033 -6384520 - LTR10A LTR ERV1 -62 547 1 242 299 13 0 chr17 83120496 83120573 -6383980 + Tigger4(Zombi) DNA MER2_type 2034 2111 -620 446 291 34 14 chr17 83121571 83121719 -6382834 + MIR SINE MIR 96 246 -16 2222 77 3 7 chr17 83121721 83122019 -6382534 + AluSx SINE Alu 1 297 -15 1686 168 0 24 chr17 83122205 83122503 -6382050 + AluJo SINE Alu 2 292 -20 491 252 42 7 chr17 83122564 83122707 -6381846 + MIR SINE MIR 28 175 -87 873 182 86 5 chr17 83122714 83122934 -6381619 - LTR37A LTR ERV1 0 426 189 438 52 103 0 chr17 83123254 83123370 -6381183 + GA-rich Low_complexity Low_complexity 1 128 0 215 288 87 65 chr17 83123512 83123741 -6380812 + L2 LINE L2 3005 3238 -34 228 232 18 0 chr17 83123884 83123940 -6380613 + (CACTC)n Simple_repeat Simple_repeat 2 58 0 188 356 14 14 chr17 83124135 83124208 -6380345 + L2 LINE L2 3200 3272 0 1144 186 114 93 chr17 83124247 83124428 -6380125 + LTR48B LTR ERV1 6 182 -462 180 0 0 0 chr17 83124428 83124448 -6380105 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 2240 112 0 0 chr17 83124451 83124755 -6379798 - AluSx SINE Alu -8 304 1 1144 186 114 93 chr17 83124755 83124903 -6379650 + LTR48B LTR ERV1 183 346 -298 626 175 0 3 chr17 83125016 83125145 -6379408 - MSTA LTR MaLR -299 127 1 238 300 0 0 chr17 83125147 83125207 -6379346 - AluJ/FLAM SINE Alu -225 77 18 393 39 0 0 chr17 83125232 83125283 -6379270 + (TA)n Simple_repeat Simple_repeat 2 52 0 788 196 0 0 chr17 83125298 83125431 -6379122 - FLAM_C SINE Alu 0 133 1 1744 189 60 68 chr17 83125637 83125883 -6378670 + MLT1C LTR MaLR 1 243 -224 2119 143 0 0 chr17 83125883 83126190 -6378363 + AluSx SINE Alu 1 307 -5 1744 189 60 68 chr17 83126190 83126413 -6378140 + MLT1C LTR MaLR 243 466 -1 244 315 110 20 chr17 83127796 83127942 -6376611 + MIR SINE MIR 28 186 -76 2095 142 0 0 chr17 83128115 83128425 -6376128 - AluSx SINE Alu -2 310 1 2078 85 0 51 chr17 83128429 83128747 -6375806 - AluSg1 SINE Alu 0 303 1 2331 93 0 3 chr17 83128761 83129074 -6375479 - AluSx SINE Alu 0 312 1 2000 121 3 20 chr17 83129729 83130035 -6374518 - AluJb SINE Alu -11 301 1 1026 226 5 9 chr17 83130082 83130303 -6374250 - AluJo SINE Alu -92 220 1 288 307 14 7 chr17 83130347 83130424 -6374129 + (CA)n Simple_repeat Simple_repeat 1 81 -60 2353 80 0 3 chr17 83130424 83130724 -6373829 - AluSx SINE Alu -13 299 1 288 307 14 7 chr17 83130724 83130786 -6373767 + (CA)n Simple_repeat Simple_repeat 81 141 0 758 291 96 40 chr17 83131213 83131275 -6373278 - MLT1D LTR MaLR -1 504 447 2294 90 0 0 chr17 83131275 83131576 -6372977 - AluY SINE Alu -10 301 1 758 291 96 40 chr17 83131576 83131833 -6372720 - MLT1D LTR MaLR -58 447 147 2132 76 45 3 chr17 83131833 83132121 -6372432 + AluSp SINE Alu 1 300 -13 758 291 96 40 chr17 83132121 83132277 -6372276 - MLT1D LTR MaLR -358 147 1 2165 96 0 13 chr17 83132465 83132767 -6371786 - AluSx SINE Alu -14 298 1 206 320 68 29 chr17 83133093 83133196 -6371357 + MIR SINE MIR 32 138 -70 1649 159 0 7 chr17 83134361 83134632 -6369921 - AluJb SINE Alu -9 303 35 192 152 0 0 chr17 83134712 83134745 -6369808 + (CATGC)n Simple_repeat Simple_repeat 3 35 0 2361 94 0 0 chr17 83134929 83135238 -6369315 - AluSg SINE Alu -1 309 1 1829 149 0 40 chr17 83135758 83136079 -6368474 + AluJb SINE Alu 1 308 -4 866 185 6 12 chr17 83136166 83136339 -6368214 + AluJb SINE Alu 122 293 -19 2230 92 13 0 chr17 83136339 83136642 -6367911 + AluSx SINE Alu 1 307 -5 1256 258 63 61 chr17 83136810 83137187 -6367366 - MLT1F LTR MaLR 0 542 162 2015 139 0 0 chr17 83137187 83137489 -6367064 - AluJb SINE Alu -4 308 7 1256 258 63 61 chr17 83137489 83137649 -6366904 - MLT1F LTR MaLR -380 162 4 1922 100 50 0 chr17 83137719 83137999 -6366554 - AluSx SINE Alu -18 294 1 2196 87 0 16 chr17 83138533 83138844 -6365709 - AluY SINE Alu -1 310 5 2013 176 33 25 chr17 83138936 83139483 -6365070 - MLT2A2 LTR ERVL 0 554 2 2292 89 0 0 chr17 83139656 83139947 -6364606 + AluSx SINE Alu 1 291 -21 283 271 62 31 chr17 83140013 83140109 -6364444 + MIR SINE MIR 119 217 -45 1618 224 30 19 chr17 83140692 83141062 -6363491 + MLT1A2 LTR MaLR 1 374 0 2013 130 3 3 chr17 83142239 83142540 -6362013 - AluSx SINE Alu -11 301 1 1142 194 32 48 chr17 83142561 83142662 -6361891 + Charlie1 DNA MER1_type 2396 2497 -264 2012 138 0 0 chr17 83142662 83142952 -6361601 - AluSx SINE Alu -20 292 3 1142 194 32 48 chr17 83142952 83143222 -6361331 + Charlie1 DNA MER1_type 2497 2761 0 2044 104 31 3 chr17 83143384 83143673 -6360880 + AluSx SINE Alu 1 297 -15 2419 54 3 0 chr17 83143747 83144041 -6360512 + AluY SINE Alu 1 295 -16 792 183 8 0 chr17 83144351 83144477 -6360076 + FLAM_A SINE Alu 1 127 -6 707 157 61 35 chr17 83144479 83144623 -6359930 + MLT1B LTR MaLR 29 181 -209 2376 97 0 0 chr17 83144623 83144934 -6359619 + AluSx SINE Alu 1 311 -1 707 157 61 35 chr17 83144934 83144986 -6359567 + MLT1B LTR MaLR 181 230 -160 1977 125 30 0 chr17 83145504 83145799 -6358754 - AluSg SINE Alu -6 304 1 1233 184 120 11 chr17 83146037 83146303 -6358250 - AluSg1 SINE Alu -14 295 1 605 175 98 77 chr17 83146303 83146408 -6358145 + MER3 DNA MER1_type 10 122 -87 2180 103 6 13 chr17 83146408 83146720 -6357833 - AluSx SINE Alu -2 310 1 605 175 98 77 chr17 83146720 83146808 -6357745 + MER3 DNA MER1_type 122 207 -2 386 298 247 7 chr17 83146828 83147265 -6357288 + L2 LINE L2 2192 2733 -581 246 333 156 0 chr17 83147372 83147513 -6357040 + L2 LINE L2 2927 3089 -224 261 266 0 0 chr17 83147647 83147741 -6356812 + CT-rich Low_complexity Low_complexity 3 96 0 563 200 0 7 chr17 83147854 83148004 -6356549 + CT-rich Low_complexity Low_complexity 1 149 0 1004 178 129 76 chr17 83148872 83148978 -6355575 + MLT1B LTR MaLR 3 102 -288 1871 113 60 7 chr17 83148978 83149261 -6355292 + AluSg SINE Alu 1 298 -12 2217 88 10 0 chr17 83149269 83149564 -6354989 + AluSq SINE Alu 1 298 -15 1004 178 129 76 chr17 83149564 83149738 -6354815 + MLT1B LTR MaLR 108 315 -75 1757 159 7 32 chr17 83149738 83149849 -6354704 + AluJb SINE Alu 2 114 -198 2131 110 13 0 chr17 83149849 83150149 -6354404 - AluSx SINE Alu -8 304 1 1757 159 7 32 chr17 83150149 83150345 -6354208 + AluJb SINE Alu 114 301 -11 1004 178 129 76 chr17 83150345 83150396 -6354157 + MLT1B LTR MaLR 315 362 -28 1017 226 48 53 chr17 83151711 83151880 -6352673 - MER68 LTR ERV1 -203 359 191 1740 164 22 19 chr17 83151880 83152191 -6352362 + AluJo SINE Alu 1 312 0 1017 226 48 53 chr17 83152191 83152358 -6352195 - MER68 LTR ERV1 -371 191 25 2259 98 3 3 chr17 83152601 83152906 -6351647 - AluSq SINE Alu -8 305 1 1753 170 7 3 chr17 83153313 83153602 -6350951 - AluJo SINE Alu -10 302 13 352 252 7 7 chr17 83153631 83153782 -6350771 + GA-rich Low_complexity Low_complexity 2 152 0 2389 162 45 32 chr17 83153795 83153970 -6350583 + L1MB5 LINE L1 5699 5870 -304 1661 180 10 23 chr17 83153970 83154275 -6350278 + AluJb SINE Alu 1 301 -11 2389 162 45 32 chr17 83154275 83154507 -6350046 + L1MB5 LINE L1 5870 6115 -59 2063 116 7 3 chr17 83154507 83154810 -6349743 - AluSx SINE Alu -8 304 1 2389 162 45 32 chr17 83154810 83154865 -6349688 + L1MB5 LINE L1 6115 6168 -6 2038 103 43 0 chr17 83155631 83155913 -6348640 - AluSx SINE Alu -18 294 1 1621 170 38 21 chr17 83155941 83156230 -6348323 - AluJo SINE Alu -18 294 1 321 343 21 14 chr17 83156243 83156383 -6348170 - MIR SINE MIR -120 142 2 704 58 0 0 chr17 83156391 83156478 -6348075 - AluSg/x SINE Alu -11 298 212 993 271 34 31 chr17 83156512 83156870 -6347683 + MLT1A1 LTR MaLR 2 360 -5 214 294 0 24 chr17 83157428 83157513 -6347040 + (GGGTG)n Simple_repeat Simple_repeat 4 86 0 2175 105 0 46 chr17 83157546 83157682 -6346871 + AluSx SINE Alu 1 142 -170 2419 90 0 0 chr17 83157682 83157994 -6346559 + AluSx SINE Alu 1 312 0 2175 105 0 46 chr17 83157994 83158181 -6346372 + AluSx SINE Alu 142 309 -3 350 218 90 0 chr17 83158735 83158813 -6345740 + MIR SINE MIR 21 105 -157 1475 152 39 69 chr17 83158832 83158965 -6345588 - L1MB7 LINE L1 -19 6165 6029 2532 98 8 48 chr17 83158965 83159180 -6345373 - THE1B LTR MaLR 0 364 169 1790 137 65 7 chr17 83159180 83159472 -6345081 + AluSq SINE Alu 1 309 -4 2532 98 8 48 chr17 83159472 83159633 -6344920 - THE1B LTR MaLR -195 169 3 1475 152 39 69 chr17 83159633 83159860 -6344693 - L1MB7 LINE L1 -155 6029 5816 1661 121 117 7 chr17 83159909 83160182 -6344371 - AluJo SINE Alu -9 303 1 2003 143 0 0 chr17 83160189 83160490 -6344063 - AluSq SINE Alu -12 301 1 2492 170 12 57 chr17 83160491 83160598 -6343955 - L1MB3 LINE L1 -41 6142 6032 1574 162 47 24 chr17 83160598 83160863 -6343690 + AluJo SINE Alu 1 275 -37 189 0 0 0 chr17 83160863 83160884 -6343669 + (GA)n Simple_repeat Simple_repeat 2 22 0 1574 162 47 24 chr17 83160884 83160915 -6343638 + AluJo SINE Alu 275 304 -8 2492 170 12 57 chr17 83160915 83161139 -6343414 - L1MB3 LINE L1 -151 6032 5800 1961 108 0 49 chr17 83161139 83161446 -6343107 - AluSx SINE Alu -18 294 3 2176 121 0 3 chr17 83161453 83161758 -6342795 - AluSg SINE Alu -6 304 1 2492 170 12 57 chr17 83161758 83161998 -6342555 - L1MB3 LINE L1 -389 5794 5588 821 211 0 48 chr17 83162000 83162119 -6342434 - L1MB7 LINE L1 -361 5823 5717 2256 86 10 0 chr17 83162119 83162421 -6342132 + AluSp SINE Alu 1 305 -8 821 211 0 48 chr17 83162421 83162510 -6342043 - L1MB7 LINE L1 -467 5717 5625 206 237 150 5 chr17 83162753 83162856 -6341697 - MIR SINE MIR -62 146 29 352 265 103 22 chr17 83164044 83164180 -6340373 + MIR SINE MIR 2 148 -114 519 172 71 0 chr17 83164246 83164345 -6340208 - MLT1D LTR MaLR 0 505 400 2119 79 52 0 chr17 83164378 83164669 -6339884 + AluY SINE Alu 1 306 -5 2781 104 106 64 chr17 83164674 83164977 -6339576 + MER4B LTR ERV1 10 299 -311 2116 134 0 3 chr17 83164977 83165290 -6339263 - AluSx SINE Alu 0 312 1 2781 104 106 64 chr17 83165290 83165563 -6338990 + MER4B LTR ERV1 299 610 0 779 238 40 27 chr17 83165565 83165786 -6338767 - MLT1D LTR MaLR -115 390 167 446 215 74 70 chr17 83165786 83166008 -6338545 - LTR48 LTR ERV1 0 787 418 793 432 0 539 chr17 83166073 83166263 -6338290 - LTR48 LTR ERV1 -406 238 115 1112 219 130 0 chr17 83166263 83166365 -6338188 - MER2 DNA MER2_type -4 340 253 1826 109 97 0 chr17 83166365 83166632 -6337921 + AluSx SINE Alu 1 293 -19 1112 219 130 0 chr17 83166632 83166830 -6337723 - MER2 DNA MER2_type -91 253 1 793 432 0 539 chr17 83166830 83166884 -6337669 - LTR48 LTR ERV1 -529 115 1 740 276 36 40 chr17 83167060 83167390 -6337163 + MER87 LTR ERV1 199 547 -9 332 254 149 8 chr17 83167400 83167433 -6337120 - MLT1D LTR MaLR -473 153 126 2254 91 10 0 chr17 83167433 83167729 -6336824 - AluSp SINE Alu -14 299 1 332 254 149 8 chr17 83167729 83167829 -6336724 - MLT1D LTR MaLR -500 126 1 2139 123 153 5 chr17 83167886 83168259 -6336294 - MSTA LTR MaLR 0 428 1 2255 152 13 16 chr17 83168368 83168744 -6335809 - THE1C LTR MaLR 0 375 1 345 250 186 7 chr17 83169651 83169791 -6334762 + Charlie8 DNA MER1_type 37 201 -2216 1118 250 92 9 chr17 83169869 83170217 -6334336 + MLT1C LTR MaLR 6 382 -85 817 165 0 0 chr17 83170217 83170350 -6334203 + FRAM SINE Alu 38 170 -6 1776 94 120 7 chr17 83170801 83171076 -6333477 - AluSg1 SINE Alu -3 306 1 2223 108 0 3 chr17 83171076 83171381 -6333172 - AluSg SINE Alu -5 305 1 1698 169 3 13 chr17 83171520 83171827 -6332726 - AluJo SINE Alu -8 304 1 252 318 196 7 chr17 83171945 83172093 -6332460 + MER5B DNA MER1_type 1 176 -2 913 228 115 39 chr17 83172118 83172500 -6332053 - LTR16C LTR ERVL -2 489 79 445 296 99 0 chr17 83172587 83172749 -6331804 - MIR SINE MIR -1 261 84 2035 104 3 64 chr17 83172911 83173239 -6331314 + AluSx SINE Alu 1 308 -4 268 274 170 15 chr17 83174325 83174460 -6330093 - MIR3 SINE MIR -4 204 49 200 189 27 40 chr17 83175051 83175125 -6329428 + (CGCGG)n Simple_repeat Simple_repeat 5 77 0 21 71 0 0 chr17 83175311 83175353 -6329200 + GC_rich Low_complexity Low_complexity 1 42 0 202 200 11 78 chr17 83176199 83176289 -6328264 + G-rich Low_complexity Low_complexity 3 86 0 21 0 0 0 chr17 83176528 83176549 -6328004 + GC_rich Low_complexity Low_complexity 1 21 0 278 321 38 0 chr17 83178424 83178530 -6326023 + L2 LINE L2 3203 3312 -1 777 190 50 6 chr17 83178863 83179042 -6325511 - MER5A DNA MER1_type 0 189 3 233 319 66 84 chr17 83179924 83180090 -6324463 + MIR SINE MIR 4 166 -42 350 348 44 13 chr17 83180629 83180787 -6323766 + MIR SINE MIR 90 252 -10 204 254 0 0 chr17 83181410 83181469 -6323084 + (TG)n Simple_repeat Simple_repeat 1 59 0 1436 200 35 56 chr17 83181494 83181684 -6322869 - L1ME3A LINE L1 -71 6099 5907 2746 104 0 5 chr17 83181684 83182059 -6322494 + THE1C LTR MaLR 1 373 -2 1436 200 35 56 chr17 83182059 83182347 -6322206 - L1ME3A LINE L1 -263 5907 5631 2260 88 3 16 chr17 83183535 83183843 -6320710 + AluSx SINE Alu 1 304 -8 1838 177 0 0 chr17 83184967 83185266 -6319287 - AluJo SINE Alu -13 299 1 455 263 97 16 chr17 83185338 83185524 -6319029 - MIR3 SINE MIR -4 204 4 245 355 47 19 chr17 83186014 83186121 -6318432 + MER91C DNA MER1_type 1 110 -30 212 298 48 12 chr17 83187107 83187191 -6317362 - MIR SINE MIR -111 151 65 622 244 99 21 chr17 83187192 83187434 -6317119 + LTR16C LTR ERVL 231 491 0 360 346 28 17 chr17 83188023 83188202 -6316351 - MER5A DNA MER1_type -4 185 5 351 269 121 40 chr17 83188314 83188463 -6316090 - MIR3 SINE MIR -36 172 12 1827 136 4 14 chr17 83189197 83189477 -6315076 - AluSg SINE Alu -10 300 24 23 0 0 29 chr17 83189485 83189504 -6315049 + AT_rich Low_complexity Low_complexity 1 20 -13 1898 97 36 11 chr17 83189504 83189783 -6314770 - AluSx SINE Alu -21 291 6 23 0 0 29 chr17 83189783 83189797 -6314756 + AT_rich Low_complexity Low_complexity 20 33 0 547 286 8 0 chr17 83190711 83190844 -6313709 - MIR SINE MIR -121 141 8 1875 111 0 31 chr17 83190905 83191086 -6313467 - AluSx SINE Alu 0 309 140 2322 81 0 3 chr17 83191086 83191383 -6313170 - AluSc SINE Alu -13 296 1 1875 111 0 31 chr17 83191383 83191517 -6313036 - AluSx SINE Alu -169 140 3 336 247 0 12 chr17 83191524 83191605 -6312948 - L2 LINE L2 -601 2713 2634 2242 115 0 0 chr17 83193241 83193553 -6311000 + AluSx SINE Alu 1 312 0 326 302 74 20 chr17 83193705 83193907 -6310646 + L2 LINE L2 2383 2595 -719 798 67 0 0 chr17 83193925 83194030 -6310523 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 2126 113 6 10 chr17 83194030 83194341 -6310212 - AluSx SINE Alu -2 310 1 255 275 78 48 chr17 83194341 83194508 -6310045 + L2 LINE L2 2687 2858 -456 298 27 0 0 chr17 83195295 83195332 -6309221 + tRNA-Gly-GGA tRNA tRNA 1 37 -38 193 222 0 0 chr17 83195689 83195725 -6308828 + MIR SINE MIR 76 111 -97 182 134 0 60 chr17 83196110 83196177 -6308376 + (TAA)n Simple_repeat Simple_repeat 1 63 0 204 402 0 0 chr17 83196704 83196786 -6307767 - L3 LINE CR1 -109 1468 1387 1593 183 10 86 chr17 83196932 83196987 -6307566 - MLT1A1 LTR MaLR -11 354 296 1831 170 3 0 chr17 83196987 83197287 -6307266 - AluJb SINE Alu -11 301 1 1593 183 10 86 chr17 83197287 83197446 -6307107 - MLT1A1 LTR MaLR -69 296 127 2157 120 0 0 chr17 83197446 83197747 -6306806 - AluSx SINE Alu -11 301 1 1593 183 10 86 chr17 83197747 83197855 -6306698 - MLT1A1 LTR MaLR -238 127 62 2028 124 3 3 chr17 83197855 83198162 -6306391 - AluSx SINE Alu -5 307 1 1593 183 10 86 chr17 83198162 83198220 -6306333 - MLT1A1 LTR MaLR -303 62 1 212 184 0 0 chr17 83198277 83198315 -6306238 - MIR SINE MIR -62 146 109 1939 134 0 3 chr17 83198538 83198830 -6305723 - AluSx SINE Alu -21 291 1 1975 229 96 13 chr17 83199006 83199557 -6304996 - MER77 LTR ERV1 -7 598 2 570 246 123 28 chr17 83200724 83200935 -6303618 + MIR SINE MIR 28 258 -4 2123 113 7 7 chr17 83201055 83201364 -6303189 + AluSg1 SINE Alu 1 309 0 3286 125 39 16 chr17 83201438 83201950 -6302603 + MER1A DNA MER1_type 6 529 0 1155 212 4 38 chr17 83201950 83202314 -6302239 - MLT1C LTR MaLR -48 342 1 703 172 32 19 chr17 83202326 83202483 -6302070 + ORSL DNA AcHobo 117 275 0 478 289 159 10 chr17 83203006 83203214 -6301339 - MIR SINE MIR -4 258 20 1754 178 10 3 chr17 83203394 83203698 -6300855 - AluJb SINE Alu -6 306 1 1579 210 49 15 chr17 83203757 83204148 -6300405 - MLT1C LTR MaLR 0 467 64 381 93 0 0 chr17 83204148 83204202 -6300351 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 2265 92 0 0 chr17 83204227 83204520 -6300033 + AluSq SINE Alu 1 293 -20 734 255 59 68 chr17 83204521 83204777 -6299776 - L1ME3 LINE L1 -4 6158 5904 2001 62 102 0 chr17 83204777 83205052 -6299501 - AluSx SINE Alu -9 303 1 734 255 59 68 chr17 83205052 83205132 -6299421 - L1ME3 LINE L1 -258 5904 5825 1071 84 0 0 chr17 83205138 83205281 -6299272 - L1PB1 LINE L1 0 6151 6009 1594 139 34 41 chr17 83205811 83206089 -6298464 + AluJb SINE Alu 1 278 -34 186 43 0 0 chr17 83206089 83206112 -6298441 + (TC)n Simple_repeat Simple_repeat 2 24 0 1594 139 34 41 chr17 83206112 83206127 -6298426 + AluJb SINE Alu 278 292 -20 255 227 121 0 chr17 83206260 83206326 -6298227 + MER106B DNA MER1_type 1 74 -985 333 262 145 28 chr17 83206461 83206606 -6297947 - MIR SINE MIR -37 225 64 1629 265 35 4 chr17 83206761 83207214 -6297339 + MLT1C LTR MaLR 1 467 0 495 178 0 0 chr17 83207311 83207412 -6297141 + (TG)n Simple_repeat Simple_repeat 2 102 0 267 133 0 0 chr17 83212049 83212094 -6292459 + (TCCC)n Simple_repeat Simple_repeat 2 46 0 2219 98 3 0 chr17 83213423 83213730 -6290823 - AluSq SINE Alu -5 308 1 1333 275 79 14 chr17 83213796 83214591 -6289962 - L1ME3A LINE L1 -219 5951 5101 1972 141 26 0 chr17 83214636 83214940 -6289613 - AluJb SINE Alu 0 312 1 1450 99 14 0 chr17 83214970 83215183 -6289370 - L1MA4A LINE L1 -6 6297 6082 2267 88 7 0 chr17 83215183 83215477 -6289076 - AluSx SINE Alu -16 296 1 27 29 0 0 chr17 83215482 83215516 -6289037 + AT_rich Low_complexity Low_complexity 1 34 0 808 111 8 0 chr17 83215516 83215633 -6288920 - AluJb SINE Alu -194 118 1 493 82 10 51 chr17 83215633 83215731 -6288822 - L1MA4A LINE L1 -212 6091 5998 392 323 12 6 chr17 83216777 83217000 -6287553 + (CA)n Simple_repeat Simple_repeat 1 224 0 490 255 68 25 chr17 83217422 83217583 -6286970 - MER5B DNA MER1_type -4 174 7 1567 214 45 84 chr17 83218144 83218630 -6285923 - MLT1C LTR MaLR 0 467 1 312 277 132 6 chr17 83220039 83220198 -6284355 - L2 LINE L2 -1228 2086 1908 1733 167 40 0 chr17 83220199 83220539 -6284014 + AluJb SINE Alu 1 352 0 300 292 26 51 chr17 83220539 83220734 -6283819 - L2 LINE L2 -1392 1922 1733 422 280 0 0 chr17 83220753 83220860 -6283693 - MLT1B LTR MaLR 0 390 284 973 199 60 26 chr17 83220862 83221002 -6283551 - MLT1B LTR MaLR -124 343 209 2199 98 7 0 chr17 83221002 83221308 -6283245 - AluSx SINE Alu -4 308 1 973 199 60 26 chr17 83221308 83221475 -6283078 - MLT1B LTR MaLR -258 209 6 593 182 45 27 chr17 83222897 83223007 -6281546 + AluJb SINE Alu 14 125 -187 234 268 52 10 chr17 83224129 83224226 -6280327 + MER5B DNA MER1_type 22 122 -56 186 394 61 0 chr17 83225350 83225482 -6279071 - MIR3 SINE MIR -5 203 64 23 0 0 0 chr17 83225786 83225809 -6278744 + AT_rich Low_complexity Low_complexity 1 23 0 1820 163 0 3 chr17 83225813 83226101 -6278452 - AluJb SINE Alu -25 287 1 1079 170 31 10 chr17 83226104 83226298 -6278255 - L1MB3 LINE L1 0 6183 5986 206 241 25 51 chr17 83227451 83227530 -6277023 - L2 LINE L2 -219 3053 2977 560 226 44 77 chr17 83228160 83228341 -6276212 + MIR SINE MIR 51 225 -37 243 243 95 27 chr17 83230972 83231046 -6273507 - MER91A DNA MER1_type -1 195 117 384 274 131 0 chr17 83231050 83231203 -6273350 - MER91A DNA MER1_type -23 173 1 2238 105 0 3 chr17 83231749 83232054 -6272499 + AluSp SINE Alu 1 304 -9 1828 180 49 27 chr17 83232245 83232611 -6271942 - MLT1A2 LTR MaLR 0 374 1 2433 57 0 22 chr17 83233070 83233386 -6271167 - AluY SINE Alu -2 309 1 1441 233 90 106 chr17 83233544 83233983 -6270570 - MER21B LTR ERV1 -126 737 313 783 117 108 0 chr17 83233983 83234103 -6270450 + FLAM_C SINE Alu 1 133 0 1441 233 90 106 chr17 83234103 83234400 -6270153 - MER21B LTR ERV1 -550 313 13 369 276 55 111 chr17 83234419 83234636 -6269917 - L2 LINE L2 0 3313 3109 253 289 0 78 chr17 83234663 83234753 -6269800 + L2 LINE L2 3229 3311 -2 291 286 197 15 chr17 83234767 83235026 -6269527 - L2 LINE L2 -796 2518 2213 1547 143 89 27 chr17 83235187 83235480 -6269073 + AluJb SINE Alu 1 311 -1 2160 110 0 3 chr17 83235562 83235863 -6268690 - AluSg SINE Alu -10 300 1 1616 269 62 4 chr17 83235864 83236344 -6268209 - L1MEc LINE L1 -5643 753 246 1250 173 68 33 chr17 83236342 83236649 -6267904 - L1MC/D LINE L1 -754 5605 5288 * 2197 81 7 10 chr17 83236656 83236951 -6267602 - AluSc SINE Alu -14 295 2 2092 129 0 10 chr17 83236962 83237272 -6267281 - AluSx SINE Alu -5 307 1 843 154 0 22 chr17 83237299 83237435 -6267118 - FLAM_C SINE Alu 0 133 1 870 199 80 0 chr17 83238738 83238914 -6265639 + MER46A DNA MER2_type 47 236 0 1991 125 0 3 chr17 83239003 83239320 -6265233 - AluSx SINE Alu 0 312 6 2004 119 6 38 chr17 83239680 83239999 -6264554 - AluSx SINE Alu -3 309 1 1326 145 117 46 chr17 83240001 83240039 -6264514 - AluSg SINE Alu -7 303 269 2279 74 0 3 chr17 83240039 83240336 -6264217 + AluY SINE Alu 8 303 -8 1326 145 117 46 chr17 83240336 83240580 -6263973 - AluSg SINE Alu -41 269 1 192 200 0 0 chr17 83240588 83240638 -6263915 + T-rich Low_complexity Low_complexity 1 50 0 780 175 36 0 chr17 83240882 83241019 -6263534 - FLAM_C SINE Alu 0 143 2 924 177 0 0 chr17 83241857 83242015 -6262538 + FRAM SINE Alu 1 157 -19 2252 115 0 3 chr17 83242017 83242331 -6262222 + AluSq SINE Alu 1 313 0 25 51 0 0 chr17 83242331 83242370 -6262183 + AT_rich Low_complexity Low_complexity 1 39 0 2132 102 0 14 chr17 83242510 83242831 -6261722 - AluSx SINE Alu 0 312 1 818 190 153 5 chr17 83243140 83243356 -6261197 - L1MB7 LINE L1 -19 6165 5918 811 147 0 60 chr17 83243367 83243517 -6261036 - FLAM_C SINE Alu 0 143 3 2322 85 0 0 chr17 83243564 83243859 -6260694 - AluSg SINE Alu -14 296 2 1158 216 103 101 chr17 83244007 83244512 -6260041 - MLT1E LTR MaLR 0 593 62 1565 186 11 7 chr17 83244875 83245155 -6259398 - AluJb SINE Alu -20 292 12 2313 93 3 0 chr17 83245217 83245519 -6259034 - AluSp SINE Alu -8 305 3 2226 91 0 7 chr17 83245521 83245819 -6258734 - AluSg SINE Alu -8 302 7 1833 103 4 4 chr17 83245943 83246196 -6258357 + AluSg SINE Alu 1 253 -57 2133 103 0 17 chr17 83246609 83246910 -6257643 - AluSq SINE Alu -17 296 1 1781 161 33 25 chr17 83246975 83247300 -6257253 + L1M3 LINE L1 5448 5778 -405 2298 92 3 0 chr17 83247300 83247604 -6256949 + AluSc SINE Alu 1 305 -4 1781 161 33 25 chr17 83247604 83247645 -6256908 + L1M3 LINE L1 5778 5817 -366 2024 139 0 13 chr17 83247659 83247968 -6256585 + AluSx SINE Alu 1 305 -7 2806 147 71 23 chr17 83247972 83248376 -6256177 + L1MB3 LINE L1 5588 6028 -155 1853 155 3 10 chr17 83248376 83248685 -6255868 - AluJo SINE Alu -5 307 1 2806 147 71 23 chr17 83248685 83248844 -6255709 + L1MB3 LINE L1 6028 6178 -5 1883 131 21 0 chr17 83248845 83249128 -6255425 + AluSx SINE Alu 1 289 -23 228 333 14 63 chr17 83249238 83249282 -6255271 - L2 LINE L2 -558 2756 2711 1881 126 35 0 chr17 83249282 83249567 -6254986 - AluSx SINE Alu -17 295 1 228 333 14 63 chr17 83249567 83249729 -6254824 - L2 LINE L2 -603 2711 2560 218 192 0 19 chr17 83249738 83249790 -6254763 + L2 LINE L2 2985 3035 -237 289 299 67 18 chr17 83251200 83251364 -6253189 - L2 LINE L2 -182 3090 2919 436 193 138 28 chr17 83251418 83251484 -6253069 - L2 LINE L2 -42 3271 3214 2070 127 0 16 chr17 83251484 83251798 -6252755 - AluSx SINE Alu -3 309 1 436 193 138 28 chr17 83251798 83251876 -6252677 - L2 LINE L2 -99 3214 3111 229 324 135 12 chr17 83252053 83252223 -6252330 - L2 LINE L2 -572 2742 2552 446 159 11 0 chr17 83252415 83252503 -6252050 + CT-rich Low_complexity Low_complexity 2 90 0 1830 161 0 19 chr17 83252518 83252835 -6251718 - AluJo SINE Alu -1 311 1 835 267 174 35 chr17 83254108 83254538 -6250015 - MLT1J LTR MaLR 0 511 22 621 238 102 34 chr17 83254576 83254782 -6249771 - MIR SINE MIR -14 248 29 255 315 39 39 chr17 83255431 83255561 -6248992 - LTR16C LTR ERVL 0 491 362 920 233 23 53 chr17 83255722 83256188 -6248365 - L1M4 LINE L1 -479 5975 5471 312 287 51 38 chr17 83256202 83256359 -6248194 - L1M4 LINE L1 -4361 2065 1907 832 103 9 0 chr17 83256385 83256501 -6248052 - FLAM_C SINE Alu -16 117 1 2029 119 0 7 chr17 83256527 83256830 -6247723 + AluSg SINE Alu 1 301 -9 2554 184 49 9 chr17 83256830 83257400 -6247153 - L1M4 LINE L1 -964 5182 4590 707 159 7 26 chr17 83257717 83258033 -6246520 + (TGGA)n Simple_repeat Simple_repeat 1 309 0 401 323 44 19 chr17 83258157 83258315 -6246238 - MIR3 SINE MIR -17 191 30 1727 185 0 0 chr17 83259088 83259380 -6245173 - AluJo SINE Alu -20 292 1 414 0 0 0 chr17 83259431 83259477 -6245076 + (TG)n Simple_repeat Simple_repeat 2 47 0 1966 108 14 0 chr17 83259619 83259742 -6244811 + AluSc SINE Alu 1 121 -188 189 0 0 0 chr17 83259742 83259763 -6244790 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1966 108 14 0 chr17 83259763 83259918 -6244635 + AluSc SINE Alu 121 283 -26 2880 140 7 4 chr17 83259918 83260369 -6244184 - L1PA16 LINE L1 -5 6161 5710 540 200 25 0 chr17 83260497 83260617 -6243936 - MIR3 SINE MIR -1 207 85 208 325 25 25 chr17 83261273 83261353 -6243200 - MER91A DNA MER1_type -1 195 116 441 263 26 51 chr17 83261366 83261522 -6243031 - MER91A DNA MER1_type -44 152 1 690 100 10 0 chr17 83261981 83262081 -6242472 + AluS SINE Alu 2 102 -210 530 265 78 7 chr17 83262103 83262439 -6242114 - LTR16C LTR ERVL 0 491 98 1955 99 20 30 chr17 83262647 83262950 -6241603 + AluSx SINE Alu 1 300 -12 225 288 0 15 chr17 83263209 83263275 -6241278 + C-rich Low_complexity Low_complexity 1 65 0 256 368 20 13 chr17 83263808 83263960 -6240593 - MER5A DNA MER1_type 0 189 37 32 26 0 0 chr17 83263966 83264005 -6240548 + AT_rich Low_complexity Low_complexity 1 39 0 816 100 0 0 chr17 83264031 83264141 -6240412 - FLAM_C SINE Alu -32 111 2 2040 106 3 0 chr17 83265686 83265990 -6238563 - AluSx SINE Alu 0 305 1 573 254 34 104 chr17 83266165 83266433 -6238120 - L2 LINE L2 -5 3267 3019 246 295 90 8 chr17 83267650 83267772 -6236781 - MIR3 SINE MIR -32 176 45 217 239 179 0 chr17 83268073 83268140 -6236413 + MIR SINE MIR 178 256 -6 22 70 0 0 chr17 83270728 83270771 -6233782 + AT_rich Low_complexity Low_complexity 1 43 0 586 205 53 53 chr17 83271178 83271349 -6233204 - MIR SINE MIR -37 225 55 2319 89 0 0 chr17 83271450 83271752 -6232801 - AluSx SINE Alu -10 302 1 657 262 67 24 chr17 83271816 83272026 -6232527 + MER20 DNA MER1_type 1 219 0 717 203 7 27 chr17 83272034 83272182 -6232371 - MER5A DNA MER1_type 0 189 45 1515 164 4 4 chr17 83272182 83272444 -6232109 + AluJo SINE Alu 51 312 0 584 136 203 0 chr17 83272453 83272571 -6231982 + FLAM_C SINE Alu 2 143 0 193 214 0 89 chr17 83272574 83272630 -6231923 - MER5A DNA MER1_type -138 51 1 242 285 170 18 chr17 83272776 83272941 -6231612 - MIR3 SINE MIR -11 197 8 1281 146 43 112 chr17 83273078 83273206 -6231347 + AluJb SINE Alu 1 136 -176 1948 115 26 30 chr17 83273206 83273511 -6231042 - AluSx SINE Alu -8 304 1 1281 146 43 112 chr17 83273511 83273704 -6230849 + AluJb SINE Alu 136 300 -12 3485 180 25 14 chr17 83273705 83274356 -6230197 - L1MC1 LINE L1 -15 6318 5661 2564 209 45 11 chr17 83274374 83274901 -6229652 - MLT1G1 LTR MaLR -48 547 3 317 250 0 15 chr17 83275008 83275076 -6229477 - MLT1J LTR MaLR -315 196 130 * 880 156 81 25 chr17 83275069 83275229 -6229324 - MER21B LTR ERV1 -366 497 329 2349 122 48 5 chr17 83275230 83275623 -6228930 - L1MC/D LINE L1 -658 5675 5266 1602 106 0 0 chr17 83275958 83276175 -6228378 + AluSx SINE Alu 6 222 -90 1461 132 125 40 chr17 83276199 83276471 -6228082 - AluJo SINE Alu -17 295 1 403 333 72 21 chr17 83277299 83277536 -6227017 + L1ME LINE L1 5574 5822 -299 1874 136 58 0 chr17 83277543 83277837 -6226716 + AluJb SINE Alu 1 311 -1 22 0 0 0 chr17 83278261 83278283 -6226270 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 83278768 83278788 -6225765 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 618 258 252 3 chr17 83278792 83279153 -6225400 - L2 LINE L2 -20 3293 2843 238 345 64 0 chr17 83279166 83279276 -6225277 - L2 LINE L2 -16 3256 3140 2219 90 10 0 chr17 83279371 83279671 -6224882 + AluSp SINE Alu 1 303 -10 2215 91 14 0 chr17 83280281 83280577 -6223976 - AluSx SINE Alu -12 300 1 1070 243 68 38 chr17 83280578 83280948 -6223605 - MER68 LTR ERV1 -16 546 166 1394 100 10 5 chr17 83280948 83281148 -6223405 - AluSg/x SINE Alu -9 303 103 2439 68 0 3 chr17 83281265 83281572 -6222981 - AluSq SINE Alu -7 306 1 1524 175 25 21 chr17 83281806 83282131 -6222422 + MER4D LTR ERV1 1 326 -546 1720 140 0 90 chr17 83282134 83282477 -6222076 - AluSx SINE Alu 0 312 1 1430 123 0 0 chr17 83282496 83282700 -6221853 - AluSg/x SINE Alu -7 303 100 1710 92 72 12 chr17 83282721 83282972 -6221581 + AluSg SINE Alu 17 282 -28 2276 100 0 0 chr17 83282998 83283298 -6221255 + AluSx SINE Alu 4 303 -9 3550 149 21 4 chr17 83283298 83283861 -6220692 - MER50 LTR ERV1 -161 573 1 1003 151 70 0 chr17 83283861 83284036 -6220517 + MER4D LTR ERV1 716 903 0 1645 113 59 8 chr17 83284206 83284462 -6220091 - AluSx SINE Alu -1 311 43 1702 145 85 0 chr17 83284471 83284753 -6219800 - AluSx SINE Alu -6 306 1 2056 82 57 3 chr17 83284894 83285176 -6219377 + AluSc SINE Alu 1 297 -12 212 175 0 0 chr17 83286042 83286082 -6218471 + T-rich Low_complexity Low_complexity 1 40 0 440 258 0 117 chr17 83286299 83286342 -6218211 - MIR SINE MIR -4 258 212 2092 126 0 0 chr17 83286342 83286635 -6217918 - AluSx SINE Alu -17 295 3 440 258 0 117 chr17 83286635 83286804 -6217749 - MIR SINE MIR -50 212 71 2045 187 21 64 chr17 83286807 83286995 -6217558 + MLT1D LTR MaLR 14 209 -296 7966 81 18 15 chr17 83286995 83288063 -6216490 - MER11C LTR ERVK 0 1071 1 2045 187 21 64 chr17 83288063 83288388 -6216165 + MLT1D LTR MaLR 209 505 0 2240 72 24 3 chr17 83288419 83288711 -6215842 + AluSx SINE Alu 1 298 -14 926 152 0 0 chr17 83288711 83288849 -6215704 + AluSg/x SINE Alu 134 271 -41 510 128 103 0 chr17 83288950 83289028 -6215525 - AluS SINE Alu -225 87 2 1292 113 8 54 chr17 83289040 83289279 -6215274 + MER41B LTR ERV1 3 230 -405 2048 116 0 23 chr17 83289279 83289582 -6214971 + AluSx SINE Alu 1 296 -16 589 160 0 0 chr17 83289585 83289679 -6214874 - MER2 DNA MER2_type -209 136 43 1741 73 0 51 chr17 83289800 83290044 -6214509 - AluY SINE Alu -89 222 1 320 352 50 11 chr17 83290171 83290353 -6214200 + L2 LINE L2 2866 3054 -218 560 221 101 25 chr17 83290541 83290699 -6213854 - MER21B LTR ERV1 -56 807 638 451 155 95 0 chr17 83290700 83290770 -6213783 - MER41B LTR ERV1 -2 633 478 1224 103 41 77 chr17 83290770 83290965 -6213588 + AluSx SINE Alu 1 188 -124 2245 118 0 10 chr17 83290967 83291280 -6213273 + AluSg SINE Alu 1 310 0 2605 159 13 55 chr17 83291280 83291826 -6212727 - MER41B LTR ERV1 -112 523 1 901 240 54 60 chr17 83291826 83291970 -6212583 - MER21B LTR ERV1 -221 642 499 2089 128 0 14 chr17 83291970 83292267 -6212286 - AluJo SINE Alu -19 293 1 901 240 54 60 chr17 83292267 83292438 -6212115 - MER21B LTR ERV1 -364 499 329 708 203 53 102 chr17 83292485 83292731 -6211822 - MER21B LTR ERV1 -629 234 1 2343 98 7 0 chr17 83292825 83293130 -6211423 + AluSp SINE Alu 1 307 -6 2068 127 3 0 chr17 83293210 83293493 -6211060 - AluSx SINE Alu -28 284 1 1526 127 151 8 chr17 83293493 83293752 -6210801 - AluSx SINE Alu -16 296 1 2228 125 3 0 chr17 83294022 83294333 -6210220 - AluSx SINE Alu 0 312 1 2093 144 3 0 chr17 83294873 83295178 -6209375 + AluSx SINE Alu 1 306 -6 1539 158 105 11 chr17 83295188 83295473 -6209080 + AluSx SINE Alu 1 312 0 2298 107 7 0 chr17 83295523 83295822 -6208731 - AluSx SINE Alu -11 301 1 1266 126 8 54 chr17 83295822 83296061 -6208492 - MER41B LTR ERV1 -405 230 3 1897 147 30 10 chr17 83296072 83296371 -6208182 + AluSx SINE Alu 1 305 -7 1067 230 98 3 chr17 83296387 83296674 -6207879 + L1M4 LINE L1 5485 5798 -386 1303 122 6 0 chr17 83296675 83296847 -6207706 + AluSx SINE Alu 1 173 -139 924 179 0 6 chr17 83296848 83297016 -6207537 + HUERS-P1 LTR ERV1 6089 6255 -8 1869 90 4 0 chr17 83297016 83297261 -6207292 + AluY SINE Alu 64 309 -2 4574 121 8 24 chr17 83297286 83297988 -6206565 + LTR8 LTR ERV1 1 691 0 972 149 7 7 chr17 83297988 83298136 -6206417 - AluJo SINE Alu -164 148 1 29 28 0 0 chr17 83298153 83298189 -6206364 + AT_rich Low_complexity Low_complexity 1 36 0 697 158 7 62 chr17 83298194 83298232 -6206321 + MER41D LTR ERV1 420 459 -98 2214 119 0 7 chr17 83298232 83298535 -6206018 - AluSg SINE Alu -9 301 1 697 158 7 62 chr17 83298535 83298642 -6205911 + MER41D LTR ERV1 459 557 0 2363 109 0 3 chr17 83299074 83299385 -6205168 - AluSq SINE Alu -3 310 1 306 48 32 81 chr17 83299385 83299447 -6205106 - AluSx SINE Alu 0 302 244 1205 136 0 6 chr17 83299447 83299616 -6204937 - AluSx SINE Alu -144 168 1 2280 89 7 0 chr17 83299706 83299997 -6204556 - AluSp SINE Alu -20 293 1 7291 129 149 47 chr17 83300022 83301563 -6202990 + pTR5 LTR ERV1 741 2438 0 212 324 134 7 chr17 83301788 83301930 -6202623 - MIR SINE MIR -42 220 61 1183 293 93 54 chr17 83302056 83302146 -6202407 + MER49 LTR ERV1 1 86 -817 2084 130 7 0 chr17 83302146 83302438 -6202115 + AluSx SINE Alu 1 294 -18 1183 293 93 54 chr17 83302438 83302722 -6201831 + MER49 LTR ERV1 86 357 -546 1942 155 0 10 chr17 83302722 83303038 -6201515 - AluSx SINE Alu 0 313 1 1183 293 93 54 chr17 83303038 83303272 -6201281 + MER49 LTR ERV1 357 580 -323 2277 120 3 0 chr17 83303272 83303571 -6200982 + AluSx SINE Alu 1 300 -12 1923 173 20 0 chr17 83303578 83303884 -6200669 + AluJo SINE Alu 1 312 0 1183 293 93 54 chr17 83303884 83303982 -6200571 + MER49 LTR ERV1 585 678 -225 2136 135 3 3 chr17 83303982 83304286 -6200267 + AluSx SINE Alu 1 304 -8 1183 293 93 54 chr17 83304286 83304423 -6200130 + MER49 LTR ERV1 678 902 -1 1751 163 17 17 chr17 83304427 83304728 -6199825 - AluJo SINE Alu -11 301 1 2464 83 0 0 chr17 83304803 83305103 -6199450 - AluSg SINE Alu -10 300 1 2050 130 3 0 chr17 83305623 83305908 -6198645 - AluSx SINE Alu 0 312 27 2230 120 13 0 chr17 83305908 83306214 -6198339 - AluSp SINE Alu -1 312 1 1704 175 18 7 chr17 83306218 83306503 -6198050 - AluJo SINE Alu -20 292 5 701 235 21 90 chr17 83306531 83306765 -6197788 - MER20 DNA MER1_type -1 218 1 1906 121 28 3 chr17 83306884 83307173 -6197380 + AluSq SINE Alu 5 300 -13 891 177 141 0 chr17 83307209 83307407 -6197146 + MLT1D LTR MaLR 1 226 -279 1826 138 35 14 chr17 83307432 83307715 -6196838 + AluJb SINE Alu 3 291 -21 1348 172 60 14 chr17 83307719 83308004 -6196549 - L1MC1 LINE L1 0 6333 6036 1350 165 48 82 chr17 83308009 83308218 -6196335 - AluJb SINE Alu -7 305 109 2235 107 0 3 chr17 83308218 83308509 -6196044 + AluSg SINE Alu 1 290 -20 1350 165 48 82 chr17 83308509 83308614 -6195939 - AluJb SINE Alu -203 109 2 2015 167 3 0 chr17 83308618 83308924 -6195629 - AluJb SINE Alu -1 311 5 243 274 197 17 chr17 83309524 83309641 -6194912 + MIR3 SINE MIR 44 181 -27 1950 143 0 14 chr17 83309656 83309936 -6194617 + AluJo SINE Alu 1 276 -36 2212 71 0 11 chr17 83309936 83310204 -6194349 + AluSg SINE Alu 28 292 -18 471 141 37 30 chr17 83310204 83310339 -6194214 + GA-rich Low_complexity Low_complexity 1 136 0 2312 96 7 0 chr17 83310352 83310655 -6193898 + AluSp SINE Alu 1 305 -8 2359 96 0 0 chr17 83311543 83311836 -6192717 + AluSx SINE Alu 1 293 -19 1275 200 3 97 chr17 83312032 83312134 -6192419 - AluJb SINE Alu 0 312 202 2069 125 189 0 chr17 83312134 83312494 -6192059 - MSTA LTR MaLR 0 428 1 1275 200 3 97 chr17 83312494 83312585 -6191968 - AluJb SINE Alu -110 202 160 405 0 0 0 chr17 83312585 83312630 -6191923 + (TA)n Simple_repeat Simple_repeat 2 46 0 1275 200 3 97 chr17 83312630 83312765 -6191788 - AluJb SINE Alu -152 160 14 1778 109 4 4 chr17 83362928 83363175 -6141378 - AluSx SINE Alu -65 247 1 424 204 74 0 chr17 83363176 83363284 -6141269 - MLT1C LTR MaLR -346 121 6 1682 153 10 100 chr17 83363866 83364106 -6140447 - MLT1B LTR MaLR -4 386 126 2159 112 3 0 chr17 83364106 83364409 -6140144 - AluSx SINE Alu -8 304 1 2547 42 0 10 chr17 83364413 83364724 -6139829 - AluY SINE Alu -3 308 1 1682 153 10 100 chr17 83364724 83364869 -6139684 - MLT1B LTR MaLR -267 123 31 180 0 0 0 chr17 83365456 83365476 -6139077 + (T)n Simple_repeat Simple_repeat 1 20 0 2160 110 0 3 chr17 83365799 83366099 -6138454 - AluSg SINE Alu -11 299 1 906 113 32 9 chr17 83366572 83366795 -6137758 + CT-rich Low_complexity Low_complexity 1 228 0 207 204 68 0 chr17 83367001 83367045 -6137508 + polypyrimidine Low_complexity Low_complexity 5 51 0 2069 109 36 0 chr17 83367573 83367906 -6136647 + AluSq SINE Alu 1 344 0 2082 130 3 0 chr17 83368632 83368939 -6135614 + AluSx SINE Alu 1 308 -4 1245 225 53 0 chr17 83369069 83369331 -6135222 + MER58 DNA MER1_type 9 284 -57 273 75 0 25 chr17 83369319 83369359 -6135194 + MER58 DNA MER1_type 2382 2420 0 * 210 294 15 15 chr17 83369694 83369762 -6134791 - MIR SINE MIR -190 72 5 1826 139 35 3 chr17 83369808 83370096 -6134457 + AluJo SINE Alu 1 297 -15 2032 109 7 10 chr17 83370098 83370392 -6134161 + AluSg SINE Alu 2 294 -16 2334 87 0 6 chr17 83370394 83370705 -6133848 + AluSc SINE Alu 1 309 0 2156 105 3 0 chr17 83371715 83372011 -6132542 + AluSx SINE Alu 1 297 -15 242 280 13 0 chr17 83372080 83372155 -6132398 - L2 LINE L2 -10 3262 3187 757 250 57 19 chr17 83372294 83372558 -6131995 - LTR37B LTR ERV1 -1 467 194 2119 99 0 0 chr17 83372664 83372970 -6131583 + AluSx SINE Alu 1 306 0 574 198 19 62 chr17 83373166 83373267 -6131286 + MER5B DNA MER1_type 22 115 -63 2019 123 44 0 chr17 83373267 83373560 -6130993 - AluSx SINE Alu -6 306 1 574 198 19 62 chr17 83373560 83373620 -6130933 + MER5B DNA MER1_type 115 176 -2 767 82 10 0 chr17 83374339 83374437 -6130116 + FLAM_C SINE Alu 22 120 -23 195 69 0 0 chr17 83374437 83374466 -6130087 + (CA)n Simple_repeat Simple_repeat 2 30 0 2486 56 0 0 chr17 83374639 83374945 -6129608 - AluY SINE Alu -5 306 1 675 108 0 0 chr17 83375103 83375196 -6129357 + AluSg/x SINE Alu 215 307 -5 1047 96 0 0 chr17 83375196 83375332 -6129221 - AluSq/x SINE Alu -176 136 1 252 250 130 9 chr17 83375345 83375453 -6129100 + MLT1I LTR MaLR 91 211 -198 1407 212 90 74 chr17 83375568 83376041 -6128512 + MER66A LTR ERV1 97 478 0 318 236 8 50 chr17 83376099 83376230 -6128323 + MLT1F LTR MaLR 432 542 0 994 121 0 0 chr17 83376535 83376667 -6127886 + FLAM_C SINE Alu 1 132 -1 1460 166 0 23 chr17 83376730 83376989 -6127564 + AluJo SINE Alu 42 294 -18 1715 148 14 27 chr17 83377563 83377860 -6126693 - AluJo SINE Alu -19 293 1 543 191 109 41 chr17 83377936 83378156 -6126397 - L1MC5 LINE L1 -36 7925 7691 1407 118 5 18 chr17 83378225 83378445 -6126108 - AluJo SINE Alu -10 302 86 21 0 0 0 chr17 83378457 83378478 -6126075 + AT_rich Low_complexity Low_complexity 1 21 0 890 259 97 58 chr17 83378549 83378716 -6125837 - L1MC5 LINE L1 -254 7707 7548 1720 142 62 3 chr17 83378716 83379004 -6125549 + AluSx SINE Alu 1 305 -7 890 259 97 58 chr17 83379004 83379250 -6125303 - L1MC5 LINE L1 -413 7548 7278 304 267 19 48 chr17 83381176 83381281 -6123272 + MER5B DNA MER1_type 74 175 -3 2365 94 0 0 chr17 83381288 83381597 -6122956 + AluSg SINE Alu 1 309 -1 378 271 51 45 chr17 83381622 83381799 -6122754 - MER5B DNA MER1_type 0 178 1 279 97 306 0 chr17 83381898 83381960 -6122593 - FLAM_A SINE Alu 0 133 53 186 208 83 0 chr17 83382191 83382239 -6122314 + MIR SINE MIR 98 149 -113 1929 112 51 10 chr17 83382420 83382714 -6121839 + AluSq SINE Alu 1 306 -7 213 246 77 0 chr17 83383565 83383630 -6120923 + L2 LINE L2 3200 3269 -3 225 261 43 33 chr17 83383837 83383929 -6120624 + MIR SINE MIR 2 94 -168 374 245 0 7 chr17 83385612 83385759 -6118794 + (TG)n Simple_repeat Simple_repeat 1 146 0 488 329 0 0 chr17 83385773 83385943 -6118610 + (TG)n Simple_repeat Simple_repeat 1 170 0 1646 150 68 4 chr17 83386940 83387220 -6117333 + AluJb SINE Alu 1 298 -14 2515 52 0 0 chr17 83387226 83387534 -6117019 + AluY SINE Alu 1 308 -3 2167 112 0 16 chr17 83387538 83387851 -6116702 + AluSx SINE Alu 5 312 0 282 360 20 7 chr17 83388071 83388221 -6116332 - MIR SINE MIR 0 262 111 431 228 148 5 chr17 83388618 83388680 -6115873 + L1M4 LINE L1 5606 5658 -516 1817 145 0 66 chr17 83388680 83389012 -6115541 + AluSx SINE Alu 1 310 -2 2005 130 3 0 chr17 83389019 83389320 -6115233 + AluSx SINE Alu 1 302 -10 431 228 148 5 chr17 83389320 83389438 -6115115 + L1M4 LINE L1 5663 5821 -353 1921 121 3 36 chr17 83389440 83389746 -6114807 + AluSc SINE Alu 1 296 -13 841 188 0 19 chr17 83389755 83389915 -6114638 - FRAM SINE Alu -19 157 1 1514 197 0 7 chr17 83390028 83390317 -6114236 - AluJo SINE Alu -13 299 13 2475 87 0 0 chr17 83390734 83391035 -6113518 + AluSx SINE Alu 1 299 -13 333 279 52 84 chr17 83391039 83391193 -6113360 + L2 LINE L2 3123 3271 -1 658 190 11 92 chr17 83391253 83391371 -6113182 + MER5B DNA MER1_type 9 108 -70 2376 91 0 0 chr17 83391371 83391667 -6112886 - AluSq SINE Alu -17 296 1 658 190 11 92 chr17 83391667 83391732 -6112821 + MER5B DNA MER1_type 108 177 -1 1925 146 13 16 chr17 83392217 83392525 -6112028 + AluSx SINE Alu 1 307 -5 2428 90 0 3 chr17 83392591 83392901 -6111652 + AluSc SINE Alu 1 309 0 245 325 53 29 chr17 83393026 83393272 -6111281 + MLT1L LTR MaLR 350 601 -14 1877 163 3 16 chr17 83393343 83393649 -6110904 + AluJb SINE Alu 11 312 0 501 226 174 32 chr17 83394095 83394283 -6110270 + MIR SINE MIR 1 227 -35 2429 76 0 0 chr17 83394283 83394571 -6109982 + AluSg SINE Alu 1 288 -22 501 226 174 32 chr17 83394571 83394614 -6109939 + MIR SINE MIR 227 262 0 351 318 112 46 chr17 83394712 83395105 -6109448 - LTR67 LTR ERVL -6 551 133 2335 94 7 0 chr17 83395163 83395460 -6109093 + AluSx SINE Alu 1 299 -13 771 162 0 22 chr17 83395715 83395851 -6108702 - FLAM_C SINE Alu 0 133 1 2249 127 7 0 chr17 83396614 83396913 -6107640 - AluSx SINE Alu -11 301 1 298 325 26 0 chr17 83397508 83397625 -6106928 - MER94 DNA DNA 0 134 15 2400 103 3 0 chr17 83398564 83398875 -6105678 - AluSx SINE Alu 0 312 1 1983 146 7 13 chr17 83399721 83400023 -6104530 + AluJo SINE Alu 1 300 -12 2446 92 7 0 chr17 83400488 83400791 -6103762 - AluSq SINE Alu -8 305 1 2536 85 0 0 chr17 83401081 83401386 -6103167 - AluSq SINE Alu -8 305 1 2343 93 0 3 chr17 83401396 83401696 -6102857 - AluSg SINE Alu -11 299 1 2233 128 0 7 chr17 83402172 83402477 -6102076 - AluSx SINE Alu -9 303 1 1806 190 23 0 chr17 83402750 83403050 -6101503 - AluJo SINE Alu 0 312 6 2320 51 62 0 chr17 83403059 83403335 -6101218 - AluY SINE Alu -18 293 1 2259 119 11 21 chr17 83403618 83403997 -6100556 - THE1C LTR MaLR 0 375 1 3246 99 4 23 chr17 83403997 83404481 -6100072 - THE1C-int LTR MaLR 0 1580 1106 436 82 0 0 chr17 83404481 83404542 -6100011 + Alu SINE Alu 236 296 -16 2144 92 3 82 chr17 83404547 83404729 -6099824 + MER4E LTR ERV1 407 602 -164 2214 111 27 0 chr17 83404729 83405027 -6099526 - AluSx SINE Alu -6 306 1 2436 79 20 13 chr17 83405035 83405340 -6099213 - AluY SINE Alu -4 307 1 2144 92 3 82 chr17 83405340 83405539 -6099014 + MER4E LTR ERV1 609 766 0 1527 148 60 95 chr17 83406289 83406539 -6098014 + LTR54 LTR ERV1 1 233 -277 731 180 0 0 chr17 83406539 83406667 -6097886 + FLAM_C SINE Alu 5 132 -1 1527 148 60 95 chr17 83406667 83406816 -6097737 + LTR54 LTR ERV1 233 386 -124 2248 111 3 0 chr17 83406817 83407115 -6097438 + AluSx SINE Alu 1 299 -13 2412 76 6 19 chr17 83407313 83407627 -6096926 + AluSg SINE Alu 1 310 0 201 286 111 0 chr17 83407697 83407823 -6096730 - L2 LINE L2 -212 3060 2921 703 257 171 27 chr17 83407933 83408062 -6096491 - MER92B LTR ERV1 0 636 527 2275 119 0 3 chr17 83408062 83408372 -6096181 + AluSg SINE Alu 1 309 -1 703 257 171 27 chr17 83408372 83408682 -6095871 - MER92B LTR ERV1 -109 527 134 2036 129 33 3 chr17 83408797 83409100 -6095453 + AluSx SINE Alu 1 312 0 2271 126 0 0 chr17 83409124 83409426 -6095127 + AluSx SINE Alu 1 302 -10 1679 167 7 21 chr17 83409445 83409733 -6094820 + AluJo SINE Alu 15 298 -14 2340 120 0 0 chr17 83409733 83410041 -6094512 + AluSx SINE Alu 1 308 -4 621 254 91 15 chr17 83410091 83410288 -6094265 + MER67C LTR ERV1 120 331 -379 932 161 52 10 chr17 83410303 83410496 -6094057 + MER67C LTR ERV1 510 710 0 435 250 162 0 chr17 83410797 83410945 -6093608 + MER5A DNA MER1_type 17 188 -1 2168 88 24 27 chr17 83411059 83411354 -6093199 + AluSx SINE Alu 1 294 -18 2521 84 0 0 chr17 83411800 83412108 -6092445 + AluSx SINE Alu 1 308 -4 189 107 0 0 chr17 83412121 83412149 -6092404 + (A)n Simple_repeat Simple_repeat 1 28 0 251 291 158 21 chr17 83412335 83412569 -6091984 + HAL1 LINE L1 2240 2505 -2 2132 102 11 3 chr17 83412765 83413050 -6091503 - AluSx SINE Alu -12 300 14 2141 120 14 0 chr17 83414028 83414320 -6090233 - AluSx SINE Alu -16 296 1 348 271 130 34 chr17 83414597 83414774 -6089779 + L2 LINE L2 3053 3246 -67 2541 63 0 10 chr17 83414952 83415253 -6089300 - AluSc SINE Alu -11 298 1 2226 97 17 0 chr17 83415971 83416259 -6088294 - AluSx SINE Alu -19 293 1 866 133 0 22 chr17 83416341 83416476 -6088077 + FLAM_C SINE Alu 2 133 0 1974 138 32 0 chr17 83416708 83416991 -6087562 - AluSg SINE Alu -18 292 1 2354 88 10 7 chr17 83417771 83418077 -6086476 + AluSx SINE Alu 1 307 -5 2097 82 96 3 chr17 83418220 83418502 -6086051 + AluSq SINE Alu 2 309 -4 339 247 38 108 chr17 83418581 83418639 -6085914 - MIR SINE MIR -40 222 162 553 215 39 15 chr17 83418639 83418769 -6085784 + FLAM_C SINE Alu 1 133 0 339 247 38 108 chr17 83418769 83418896 -6085657 - MIR SINE MIR -100 162 50 2585 58 3 10 chr17 83419559 83419870 -6084683 - AluSp SINE Alu -4 309 1 2295 99 14 0 chr17 83420428 83420722 -6083831 + AluSx SINE Alu 1 298 -14 546 193 193 55 chr17 83420888 83421069 -6083484 - MER3 DNA MER1_type -1 208 3 2218 100 4 0 chr17 83421149 83421453 -6083100 + AluSx SINE Alu 1 305 0 375 321 42 42 chr17 83421459 83421551 -6083002 + L2 LINE L2 2736 2830 -484 1645 155 75 4 chr17 83421551 83421829 -6082724 - AluJo SINE Alu -14 298 1 375 321 42 42 chr17 83421829 83421904 -6082649 + L2 LINE L2 2829 2903 -411 784 117 0 103 chr17 83422016 83422161 -6082392 - FLAM_C SINE Alu 0 133 4 1772 112 143 0 chr17 83422231 83422490 -6082063 - AluSx SINE Alu -16 296 1 2305 76 13 23 chr17 83422501 83422803 -6081750 - AluSq SINE Alu -14 299 1 425 296 56 0 chr17 83422837 83422962 -6081591 + L2 LINE L2 3139 3270 -2 430 291 39 34 chr17 83424107 83424286 -6080267 - MIR SINE MIR -63 199 20 1809 73 0 1 chr17 83424507 83424837 -6079716 + MER41A LTR ERV1 3 378 -176 1588 123 5 0 chr17 83424852 83425063 -6079490 + AluSx SINE Alu 35 246 -66 2245 94 0 3 chr17 83425064 83425378 -6079175 + AluSp SINE Alu 1 313 0 307 119 0 0 chr17 83425378 83425420 -6079133 + AluSx SINE Alu 234 275 -27 2354 119 3 0 chr17 83426537 83426847 -6077706 + AluSq SINE Alu 1 311 -2 2263 117 0 0 chr17 83426869 83427169 -6077384 + AluSx SINE Alu 1 300 -12 2373 102 0 13 chr17 83427235 83427549 -6077004 - AluSx SINE Alu -2 310 1 1530 139 50 66 chr17 83427783 83427962 -6076591 - AluJo SINE Alu -16 296 116 1925 104 74 34 chr17 83427962 83428259 -6076294 - AluSq SINE Alu -4 309 1 182 31 0 62 chr17 83428263 83428295 -6076258 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1530 139 50 66 chr17 83428295 83428411 -6076142 - AluJo SINE Alu -199 113 1 238 239 30 30 chr17 83428861 83428928 -6075625 - MIR SINE MIR -70 192 126 406 169 0 0 chr17 83429046 83429117 -6075436 - MSTB2 LTR MaLR 0 457 387 1096 85 0 0 chr17 83429117 83429247 -6075306 + AluSx SINE Alu 1 130 -183 722 54 0 0 chr17 83429347 83429439 -6075114 - L1PA2 LINE L1 -66 6089 5998 1116 141 12 18 chr17 83429445 83429653 -6074900 + AluSx SINE Alu 111 317 0 2104 118 100 32 chr17 83429741 83430141 -6074412 + MSTA LTR MaLR 2 428 0 2239 114 0 10 chr17 83430181 83430488 -6074065 - AluSc SINE Alu -2 307 4 2166 92 4 4 chr17 83431582 83431855 -6072698 + AluSx SINE Alu 23 295 -17 740 162 0 0 chr17 83431877 83431994 -6072559 + FLAM_C SINE Alu 2 118 -15 705 107 39 0 chr17 83432028 83432131 -6072422 + MER30 DNA MER1_type 124 230 0 927 248 21 17 chr17 83432176 83432414 -6072139 - LTR16A LTR ERVL -28 422 184 377 313 7 0 chr17 83432737 83432884 -6071669 + L1MEd LINE L1 28 175 -5944 2405 96 19 22 chr17 83433207 83433572 -6070981 - THE1B LTR MaLR 0 364 1 790 174 0 0 chr17 83433680 83433812 -6070741 - FLAM_A SINE Alu 0 133 2 805 145 22 7 chr17 83434013 83434151 -6070402 + MSTB LTR MaLR 1 140 -286 2165 114 0 17 chr17 83434253 83434550 -6070003 - AluSx SINE Alu -16 296 5 233 259 0 37 chr17 83434560 83434641 -6069912 - L1MD3 LINE L1 -14 7981 7904 1162 176 26 26 chr17 83434651 83434918 -6069635 - L1MD3 LINE L1 0 7995 7729 377 305 85 40 chr17 83436063 83436263 -6068290 + L2 LINE L2 3065 3273 -40 245 180 0 0 chr17 83436742 83436792 -6067761 + MIR SINE MIR 103 152 -110 372 150 0 0 chr17 83437140 83437200 -6067353 - AluJ/FLAM SINE Alu -242 60 1 2191 100 7 4 chr17 83437548 83437853 -6066700 + AluSx SINE Alu 1 306 0 379 271 26 66 chr17 83437909 83438060 -6066493 - MER102a DNA MER1_type -22 308 164 1268 89 0 0 chr17 83438088 83438246 -6066307 + AluSc SINE Alu 152 309 0 500 198 0 17 chr17 83438255 83438371 -6066182 - L1M4 LINE L1 -1012 5134 5021 1580 158 99 37 chr17 83438585 83438778 -6065775 + LTR28 LTR ERV1 1 223 -797 2179 143 0 0 chr17 83438778 83439078 -6065475 - AluSq SINE Alu -13 300 1 1580 158 99 37 chr17 83439078 83439206 -6065347 + LTR28 LTR ERV1 223 342 -678 364 232 124 98 chr17 83439213 83439407 -6065146 + LTR4 LTR ERV1 2 200 -396 882 249 21 29 chr17 83439587 83439868 -6064685 + LTR4 LTR ERV1 318 596 0 1526 171 49 84 chr17 83439876 83440348 -6064205 + LTR10B LTR ERV1 2 547 0 2266 214 85 37 chr17 83440348 83440867 -6063686 + LTR10B-int LTR ERV1 5 497 -6707 2210 105 0 62 chr17 83440867 83441192 -6063361 + AluSg SINE Alu 1 305 -5 2266 214 85 37 chr17 83441192 83441702 -6062851 + LTR10B-int LTR ERV1 497 1150 -6054 * 6567 231 33 17 chr17 83441697 83443257 -6061296 + LTR10B-int LTR ERV1 841 2424 -4225 5830 266 21 23 chr17 83443250 83444924 -6059629 + LTR10B-int LTR ERV1 4224 5893 -1892 * 5749 231 18 29 chr17 83445027 83446454 -6058099 + LTR10B-int LTR ERV1 5239 6649 0 414 214 86 8 chr17 83446454 83446571 -6057982 + LTR10B LTR ERV1 1 126 -421 1152 214 34 68 chr17 83446576 83446898 -6057655 + LTR10B LTR ERV1 237 547 0 605 194 34 13 chr17 83446898 83447081 -6057472 + MER61D LTR ERV1 340 501 0 600 173 79 0 chr17 83447081 83447208 -6057345 + L1MC2 LINE L1 6197 6333 -11 1598 162 72 24 chr17 83447298 83447588 -6056965 + AluSx SINE Alu 9 312 0 181 159 159 103 chr17 83447673 83447780 -6056773 - L2 LINE L2 -43 3270 3158 2229 126 3 0 chr17 83447856 83448166 -6056387 - AluSx SINE Alu -1 311 1 452 273 160 63 chr17 83448276 83448483 -6056070 + MIR SINE MIR 2 236 -26 847 160 0 0 chr17 83448483 83448614 -6055939 + FLAM_C SINE Alu 1 131 -2 452 273 160 63 chr17 83448614 83448644 -6055909 + MIR SINE MIR 236 262 0 508 122 100 11 chr17 83449110 83449200 -6055353 + MER4A LTR ERV1 1 98 -566 1613 135 0 19 chr17 83449243 83449502 -6055051 + MER4A LTR ERV1 411 664 0 191 355 0 0 chr17 83450112 83450174 -6054379 + MIR SINE MIR 5 66 -196 246 131 229 49 chr17 83450341 83450402 -6054151 - MER57A LTR ERV1 -37 366 295 221 265 82 31 chr17 83450576 83450674 -6053879 + MIR SINE MIR 93 195 -67 741 172 38 6 chr17 83450827 83450984 -6053569 - MER65C LTR ERV1 0 461 300 968 248 112 7 chr17 83451252 83451538 -6053015 - MER65C LTR ERV1 -145 316 1 2235 86 10 0 chr17 83451881 83452173 -6052380 - AluSp SINE Alu -18 295 1 295 173 0 25 chr17 83452778 83452847 -6051706 + GA-rich Low_complexity Low_complexity 2 70 -10 222 37 0 0 chr17 83452847 83452874 -6051679 + (GGGGA)n Simple_repeat Simple_repeat 2 28 0 295 173 0 25 chr17 83452874 83452885 -6051668 + GA-rich Low_complexity Low_complexity 70 80 0 222 37 0 0 chr17 83452987 83453014 -6051539 + (A)n Simple_repeat Simple_repeat 1 27 0 1886 154 0 43 chr17 83453195 83453519 -6051034 - AluSx SINE Alu -2 310 1 2396 110 0 0 chr17 83455045 83455355 -6049198 + AluSg SINE Alu 1 310 0 2110 145 0 0 chr17 83455357 83455661 -6048892 + AluSx SINE Alu 1 304 -8 1767 128 32 0 chr17 83455671 83455922 -6048631 + AluSx SINE Alu 54 312 0 803 133 9 151 chr17 83455975 83456200 -6048353 + L1MB3 LINE L1 5716 5908 -275 1568 125 12 78 chr17 83456214 83456534 -6048019 + L1MB3 LINE L1 5839 6137 -46 1169 104 0 49 chr17 83456536 83456700 -6047853 + AluSg SINE Alu 1 156 -154 2345 102 0 0 chr17 83456898 83457193 -6047360 + AluSg SINE Alu 1 295 -15 489 244 8 46 chr17 83457263 83457394 -6047159 - MER5A DNA MER1_type 0 189 64 2386 104 0 0 chr17 83458133 83458431 -6046122 - AluSx SINE Alu -14 298 1 208 380 73 29 chr17 83458603 83458740 -6045813 - L2 LINE L2 -276 2996 2854 851 99 160 0 chr17 83458846 83458998 -6045555 + AluSg SINE Alu 138 310 0 207 188 0 0 chr17 83459382 83459430 -6045123 + (TG)n Simple_repeat Simple_repeat 2 49 0 317 360 69 11 chr17 83459445 83459634 -6044919 - L2 LINE L2 -943 2371 2172 1154 158 87 109 chr17 83460112 83460264 -6044289 + MER2 DNA MER2_type 2 156 -188 1519 159 78 19 chr17 83460264 83460535 -6044018 - AluJo SINE Alu -25 287 1 1154 158 87 109 chr17 83460535 83460729 -6043824 + MER2 DNA MER2_type 156 340 -4 361 145 16 0 chr17 83461358 83461420 -6043133 + AluS SINE Alu 2 64 -239 979 203 146 75 chr17 83461525 83461992 -6042561 - MLT2B1 LTR ERVL -15 505 6 2300 98 0 3 chr17 83461997 83462294 -6042259 + AluSq SINE Alu 1 296 -17 2353 114 44 47 chr17 83462567 83462697 -6041856 + MSTA LTR MaLR 1 130 -298 2372 114 56 8 chr17 83462697 83463055 -6041498 + THE1C LTR MaLR 1 375 0 2353 114 44 47 chr17 83463055 83463123 -6041430 + MSTA LTR MaLR 130 197 -231 2304 88 0 14 chr17 83463123 83463418 -6041135 + AluSc SINE Alu 1 291 -18 2353 114 44 47 chr17 83463418 83463647 -6040906 + MSTA LTR MaLR 197 428 0 2108 135 0 7 chr17 83464586 83464890 -6039663 + AluSx SINE Alu 4 305 -7 994 233 109 104 chr17 83464891 83465438 -6039115 - L1MC5 LINE L1 -540 7421 6826 1723 120 20 4 chr17 83465438 83465688 -6038865 - AluSx SINE Alu -17 295 42 994 233 109 104 chr17 83465688 83465975 -6038578 - L1MC5 LINE L1 -1135 6826 6542 2332 96 20 0 chr17 83465977 83466280 -6038273 - AluSx SINE Alu -2 310 2 1555 180 33 26 chr17 83466507 83466813 -6037740 + AluJo SINE Alu 1 308 -4 1819 175 14 0 chr17 83466815 83467107 -6037446 + AluJb SINE Alu 1 296 -16 2454 97 3 0 chr17 83467310 83467621 -6036932 - AluSq SINE Alu -1 312 1 335 283 246 60 chr17 83467632 83467908 -6036645 - HAL1b LINE L1 -809 539 316 2531 73 0 0 chr17 83467908 83468208 -6036345 + AluY SINE Alu 1 300 -11 335 283 246 60 chr17 83468208 83468383 -6036170 - HAL1b LINE L1 -1032 316 4 2132 132 3 0 chr17 83468408 83468719 -6035834 + AluSx SINE Alu 1 312 0 2182 120 3 19 chr17 83469787 83470095 -6034458 + AluSq SINE Alu 1 303 -10 320 209 0 73 chr17 83471889 83472080 -6032473 + (CCCTAA)n Simple_repeat Simple_repeat 3 179 0 * 412 84 31 105 chr17 83471985 83472176 -6032377 + (CCTA)n Simple_repeat Simple_repeat 4 180 0 182 85 27 106 chr17 83472206 83472394 -6032159 + (CCTA)n Simple_repeat Simple_repeat 4 176 0 415 110 21 94 chr17 83472411 83472602 -6031951 + (CCTA)n Simple_repeat Simple_repeat 4 180 0 215 122 0 24 chr17 83473238 83473279 -6031274 + (CA)n Simple_repeat Simple_repeat 1 40 0 2376 100 3 0 chr17 83478196 83478496 -6026057 + AluSq SINE Alu 1 301 -12 2241 134 0 0 chr17 83480587 83480893 -6023660 + AluSx SINE Alu 1 306 -6 1145 156 55 5 chr17 83480899 83481098 -6023455 + AluJo SINE Alu 85 293 -19 395 221 0 23 chr17 83482517 83482603 -6021950 - L2 LINE L2 -43 3270 3187 880 188 6 39 chr17 83483623 83483804 -6020749 + FAM SINE Alu 1 175 0 2317 111 0 6 chr17 83483819 83484134 -6020419 + AluSq SINE Alu 1 313 0 2101 132 6 3 chr17 83485390 83485701 -6018852 - AluSx SINE Alu 0 312 1 2480 74 3 0 chr17 83485704 83486002 -6018551 - AluSx SINE Alu -13 299 1 796 167 0 23 chr17 83486002 83486134 -6018419 - AluJo/FLAM SINE Alu -173 129 1 2315 101 0 0 chr17 83486589 83486885 -6017668 + AluSg SINE Alu 1 296 -14 1503 145 5 0 chr17 83487904 83488118 -6016435 + AluSx SINE Alu 36 250 -62 1841 165 10 7 chr17 83488160 83488451 -6016102 - AluJo SINE Alu -20 292 1 237 226 0 0 chr17 83488670 83488723 -6015830 + L1ME3A LINE L1 6117 6169 -1 2264 112 7 0 chr17 83489034 83489339 -6015214 + AluSp SINE Alu 1 307 -6 2516 48 7 0 chr17 83489466 83489761 -6014792 + AluY SINE Alu 1 297 -14 1771 129 50 17 chr17 83490432 83490734 -6013819 + AluSx SINE Alu 1 312 0 822 293 78 4 chr17 83491217 83491449 -6013104 + MIR SINE MIR 13 261 -1 1946 140 14 10 chr17 83492560 83492852 -6011701 + AluSx SINE Alu 11 303 -9 1147 120 0 0 chr17 83492852 83493029 -6011524 + AluSg/x SINE Alu 134 310 0 945 135 0 0 chr17 83493042 83493175 -6011378 + FLAM_C SINE Alu 1 133 0 1999 151 10 0 chr17 83493773 83494065 -6010488 - AluJo SINE Alu -17 295 1 1914 171 7 3 chr17 83495376 83495674 -6008879 + AluJb SINE Alu 1 299 -13 851 279 36 16 chr17 83495881 83496128 -6008425 - L2 LINE L2 -508 2806 2555 2299 98 0 3 chr17 83496243 83496538 -6008015 + AluSg SINE Alu 1 294 -16 1905 104 8 0 chr17 83496540 83496799 -6007754 + AluSx SINE Alu 44 304 -8 2251 209 33 91 chr17 83497689 83498410 -6006143 + L1MD1 LINE L1 4507 5176 -970 2409 64 0 0 chr17 83498410 83498711 -6005842 + AluY SINE Alu 1 301 0 2251 209 33 91 chr17 83498711 83498828 -6005725 + L1MD1 LINE L1 5176 5298 -848 1209 137 38 39 chr17 83498839 83499273 -6005280 + LTR54 LTR ERV1 18 510 0 277 91 109 0 chr17 83499283 83499338 -6005215 + L1MB2 LINE L1 6111 6171 0 3641 199 65 28 chr17 83499344 83500264 -6004289 + L1MD1 LINE L1 5285 6238 -4 1718 151 0 23 chr17 83500335 83500600 -6003953 + AluJb SINE Alu 43 301 -11 1927 166 0 0 chr17 83500660 83500950 -6003603 + AluSx SINE Alu 1 290 -22 1444 157 4 8 chr17 83501115 83501350 -6003203 - MER46A DNA MER2_type -2 234 1 1068 242 81 9 chr17 83503530 83503852 -6000701 + L1MC4 LINE L1 6688 7032 -1010 954 232 77 71 chr17 83503899 83504255 -6000298 + L1MC4 LINE L1 7130 7491 -551 1496 88 0 0 chr17 83504255 83504436 -6000117 + AluSx SINE Alu 1 181 -131 954 232 77 71 chr17 83504436 83504613 -5999940 + L1MC4 LINE L1 7491 7666 -376 972 151 6 6 chr17 83504685 83504844 -5999709 - AluJb SINE Alu -3 309 151 305 283 90 31 chr17 83504880 83505103 -5999450 + L1MC4 LINE L1 7807 8042 0 234 254 0 0 chr17 83505444 83505499 -5999054 - Charlie8 DNA MER1_type -2260 157 103 2099 120 7 17 chr17 83506625 83506926 -5997627 + AluSq SINE Alu 1 298 -15 667 182 0 0 chr17 83507800 83507921 -5996632 + FRAM SINE Alu 43 163 -13 1949 114 46 4 chr17 83507949 83508229 -5996324 + AluSx SINE Alu 1 292 -20 582 51 0 0 chr17 83508232 83508310 -5996243 + (CATAA)n Simple_repeat Simple_repeat 1 78 0 273 57 0 0 chr17 83508310 83508345 -5996208 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2565 62 0 10 chr17 83508364 83508672 -5995881 + AluY SINE Alu 1 305 -6 1497 148 45 58 chr17 83509503 83509814 -5994739 + MER1B DNA MER1_type 33 339 0 704 165 82 0 chr17 83511178 83511348 -5993205 - MER119 DNA MER1_type -33 550 367 1758 122 4 8 chr17 83511450 83511697 -5992856 - AluSx SINE Alu -66 246 1 886 122 0 43 chr17 83512109 83512248 -5992305 + FLAM_C SINE Alu 1 133 0 362 258 97 2 chr17 83512743 83512881 -5991672 + MIR SINE MIR 42 189 -62 1524 153 0 60 chr17 83513295 83513465 -5991088 - AluJb SINE Alu -9 303 155 180 0 0 0 chr17 83513465 83513485 -5991068 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1524 153 0 60 chr17 83513485 83513595 -5990958 - AluJb SINE Alu -157 155 40 2471 92 0 0 chr17 83513598 83513901 -5990652 - AluSg SINE Alu -7 303 1 818 141 15 7 chr17 83513906 83514041 -5990512 - AluJo SINE Alu -176 136 1 288 253 108 38 chr17 83514386 83514572 -5989981 + LTR48 LTR ERV1 589 787 0 488 124 90 0 chr17 83514916 83515005 -5989548 + MER4A LTR ERV1 2 98 -566 1245 143 16 84 chr17 83515005 83515320 -5989233 + MER4A LTR ERV1 261 612 -52 1355 103 0 0 chr17 83515341 83515515 -5989038 - AluSg/x SINE Alu -9 303 130 2601 62 3 0 chr17 83515622 83515929 -5988624 - AluY SINE Alu -3 308 1 2307 101 0 3 chr17 83517023 83517320 -5987233 + AluSx SINE Alu 1 296 -16 1848 180 3 0 chr17 83517341 83517641 -5986912 + AluJo SINE Alu 1 301 -11 917 214 149 7 chr17 83517811 83518087 -5986466 + LTR53 LTR ERVL 194 508 -11 279 318 173 28 chr17 83519209 83519423 -5985130 + MIR SINE MIR 17 261 -1 426 198 108 27 chr17 83520403 83520514 -5984039 + MIR SINE MIR 47 166 -96 782 124 16 8 chr17 83521855 83521976 -5982577 + FRAM SINE Alu 37 158 -18 255 274 0 0 chr17 83522115 83522188 -5982365 - LTR33A LTR ERVL -4 519 447 298 190 63 13 chr17 83522747 83522826 -5981727 - LTR33A LTR ERVL -156 367 285 448 184 58 0 chr17 83523091 83523194 -5981359 - MLT1D LTR MaLR -5 500 392 967 129 23 0 chr17 83523194 83523326 -5981227 + AluSq/x SINE Alu 1 135 -178 1496 152 0 21 chr17 83523326 83523563 -5980990 + AluJo SINE Alu 1 232 -80 1387 184 35 62 chr17 83523612 83524013 -5980540 - MLT1D LTR MaLR -109 396 7 1823 208 83 30 chr17 83524040 83524417 -5980136 - MLT1F LTR MaLR 0 542 130 2112 156 15 63 chr17 83524417 83524560 -5979993 - MLT1B LTR MaLR 0 390 242 2132 128 0 0 chr17 83524560 83524959 -5979594 - AluSx SINE Alu 0 399 1 2112 156 15 63 chr17 83524959 83525224 -5979329 - MLT1B LTR MaLR -148 242 1 1823 208 83 30 chr17 83525224 83525350 -5979203 - MLT1F LTR MaLR -412 130 12 2338 103 0 0 chr17 83525373 83525663 -5978890 - AluSx SINE Alu -19 293 4 631 289 132 47 chr17 83525764 83525893 -5978660 - L1MC4a LINE L1 -1902 5906 5789 2300 101 0 3 chr17 83525893 83526189 -5978364 - AluSq SINE Alu -17 296 2 631 289 132 47 chr17 83526189 83526485 -5978068 - L1MC4a LINE L1 -2019 5789 5439 2269 110 0 0 chr17 83526485 83526785 -5977768 + AluJb SINE Alu 1 300 -12 631 289 132 47 chr17 83526785 83526804 -5977749 - L1MC4a LINE L1 -2369 5439 5423 1823 181 49 35 chr17 83526812 83526956 -5977597 - L1MB5 LINE L1 -8 6166 6026 1871 152 3 3 chr17 83526956 83527246 -5977307 + AluJo SINE Alu 21 310 -2 1823 181 49 35 chr17 83527246 83527535 -5977018 - L1MB5 LINE L1 -148 6026 5727 352 154 0 0 chr17 83527530 83527595 -5976958 - L1MC4a LINE L1 -2368 5440 5376 * 481 273 62 25 chr17 83527808 83527969 -5976584 - MIR SINE MIR -3 259 93 2479 191 54 30 chr17 83528167 83528705 -5975848 - MLT1F1 LTR MaLR 0 567 17 1687 241 36 4 chr17 83529078 83529555 -5974998 + Charlie4a DNA MER1_type 17 508 0 2096 130 26 32 chr17 83530342 83530719 -5973834 + THE1C LTR MaLR 1 375 0 409 304 122 0 chr17 83530730 83530878 -5973675 + MIR SINE MIR 97 262 0 294 178 133 44 chr17 83531752 83531842 -5972711 + MIR SINE MIR 12 109 -153 2467 167 47 2 chr17 83531844 83532252 -5972301 - MSTB LTR MaLR 0 426 1 8872 166 21 25 chr17 83532262 83532449 -5972104 - MSTA-int LTR MaLR -13 1638 1452 2313 102 0 22 chr17 83532449 83532762 -5971791 - AluSx SINE Alu -6 306 1 8872 166 21 25 chr17 83532762 83533599 -5970954 - MSTA-int LTR MaLR -199 1452 621 2242 114 0 3 chr17 83533599 83533898 -5970655 - AluSg SINE Alu -12 298 1 8872 166 21 25 chr17 83533898 83534516 -5970037 - MSTA-int LTR MaLR -1030 621 2 2686 128 11 34 chr17 83534520 83534956 -5969597 - MSTA LTR MaLR 0 428 3 442 317 7 14 chr17 83534968 83535113 -5969440 + MIR SINE MIR 118 261 -1 247 49 49 0 chr17 83535113 83535154 -5969399 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 184 333 123 0 chr17 83535232 83535313 -5969240 - L2 LINE L2 -23 3290 3200 312 239 28 55 chr17 83535362 83535471 -5969082 - MIR SINE MIR -112 150 45 1107 146 32 46 chr17 83535841 83535991 -5968562 + MLT1A1 LTR MaLR 7 155 -210 1980 153 14 0 chr17 83535991 83536285 -5968268 + AluJb SINE Alu 1 298 -14 1107 146 32 46 chr17 83536285 83536353 -5968200 + MLT1A1 LTR MaLR 155 222 -143 2442 86 0 16 chr17 83536408 83536711 -5967842 + AluSq SINE Alu 1 298 -15 590 282 101 24 chr17 83536711 83537048 -5967505 - L1M4 LINE L1 -1541 4605 4243 291 175 18 0 chr17 83537100 83537157 -5967396 + MLT1J LTR MaLR 3 60 -451 2165 214 54 90 chr17 83537228 83537286 -5967267 - MER21B LTR ERV1 -71 792 733 2064 152 49 3 chr17 83537286 83537635 -5966918 - MLT1A1 LTR MaLR 0 365 1 2165 214 54 90 chr17 83537635 83538050 -5966503 - MER21B LTR ERV1 -130 733 357 1500 170 23 56 chr17 83538050 83538356 -5966197 + AluJo SINE Alu 1 296 -16 2165 214 54 90 chr17 83538356 83538690 -5965863 - MER21B LTR ERV1 -506 357 13 562 290 45 27 chr17 83538704 83538862 -5965691 + MLT1J LTR MaLR 56 221 -290 3470 160 12 34 chr17 83538862 83539328 -5965225 + MER41B LTR ERV1 1 451 -184 2402 82 10 0 chr17 83539328 83539632 -5964921 + AluSx SINE Alu 1 307 -5 3470 160 12 34 chr17 83539632 83539814 -5964739 + MER41B LTR ERV1 451 635 0 562 290 45 27 chr17 83539814 83539876 -5964677 + MLT1J LTR MaLR 221 280 -231 1691 102 0 5 chr17 83540202 83540417 -5964136 - AluSx SINE Alu -98 214 1 1302 111 5 10 chr17 83540417 83540616 -5963937 - MSTA LTR MaLR -230 198 1 740 177 27 0 chr17 83540792 83540939 -5963614 + MLT1D LTR MaLR 9 159 -346 496 274 78 25 chr17 83541036 83541285 -5963268 + MER21B LTR ERV1 408 645 -4 354 248 29 0 chr17 83541323 83541428 -5963125 - MER115 DNA AcHobo -581 112 5 2330 101 0 0 chr17 83542465 83542762 -5961791 - AluSq SINE Alu -16 297 1 553 144 7 86 chr17 83543136 83543275 -5961278 + FRAM SINE Alu 48 175 -1 2207 112 0 32 chr17 83545162 83545476 -5959077 - AluSx SINE Alu -8 304 1 883 140 30 0 chr17 83545489 83545653 -5958900 - L1MB2 LINE L1 0 6171 6003 2357 108 0 0 chr17 83545791 83546087 -5958466 - AluSx SINE Alu -16 296 1 226 292 8 83 chr17 83546148 83546212 -5958341 - L1MEd LINE L1 -2009 4373 4306 910 107 15 0 chr17 83546212 83546343 -5958210 - FLAM_C SINE Alu 0 133 1 226 292 8 83 chr17 83546343 83546355 -5958198 - L1MEd LINE L1 -2076 4306 4295 1871 119 101 4 chr17 83546355 83546623 -5957930 - AluSx SINE Alu -18 294 1 226 292 8 83 chr17 83546623 83546665 -5957888 - L1MEd LINE L1 -2087 4295 4263 297 167 15 0 chr17 83546671 83546737 -5957816 + Charlie1 DNA MER1_type 2201 2267 -494 440 290 100 79 chr17 83546789 83547743 -5956810 - L1MEd LINE L1 -2124 4258 3326 2211 119 0 0 chr17 83547743 83548056 -5956497 - AluSx SINE Alu 0 313 1 440 290 100 79 chr17 83548056 83548101 -5956452 - L1MEd LINE L1 -3056 3326 3283 546 122 0 0 chr17 83548101 83548183 -5956370 - FLAM_C SINE Alu -25 118 37 440 290 100 79 chr17 83548183 83548484 -5956069 - L1MEd LINE L1 -3099 3283 2990 1798 174 17 3 chr17 83548484 83548778 -5955775 + AluJo SINE Alu 5 302 -10 440 290 100 79 chr17 83548778 83549154 -5955399 - L1MEd LINE L1 -3392 2990 2457 2292 125 0 0 chr17 83549154 83549458 -5955095 + AluSg SINE Alu 1 304 -6 440 290 100 79 chr17 83549458 83549590 -5954963 - L1MEd LINE L1 -3925 2457 2329 1535 199 0 0 chr17 83549633 83549884 -5954669 - AluJb SINE Alu -8 304 54 340 179 67 10 chr17 83550031 83550116 -5954437 - MER58 DNA MER1_type -1 2419 2340 832 173 0 0 chr17 83550116 83550249 -5954304 - FLAM_C SINE Alu 0 133 1 340 179 67 10 chr17 83550249 83550268 -5954285 - MER58 DNA MER1_type -80 2340 101 424 301 65 86 chr17 83550377 83550654 -5953899 - L1MEd LINE L1 -795 1948 1667 2415 106 0 0 chr17 83550654 83550966 -5953587 - AluSx SINE Alu 0 312 1 424 301 65 86 chr17 83550966 83551569 -5952984 - L1MEd LINE L1 -1076 1667 1010 1866 173 0 7 chr17 83551569 83551883 -5952670 - AluJo SINE Alu 0 312 1 424 301 65 86 chr17 83551883 83552365 -5952188 - L1MEd LINE L1 -1733 1010 519 2196 98 22 0 chr17 83552632 83552933 -5951620 - AluSx SINE Alu 0 307 1 1857 146 3 17 chr17 83552935 83553237 -5951316 - AluJo SINE Alu -14 298 1 2404 102 0 0 chr17 83553525 83553828 -5950725 - AluSx SINE Alu -9 303 1 2114 106 3 36 chr17 83554386 83554732 -5949821 + AluSx SINE Alu 1 336 0 2144 113 0 10 chr17 83555391 83555693 -5948860 - AluJb SINE Alu -13 299 1 2523 64 0 0 chr17 83555702 83555999 -5948554 - AluY SINE Alu -14 297 1 2402 90 3 0 chr17 83556000 83556300 -5948253 - AluSx SINE Alu -11 301 1 315 153 17 0 chr17 83556320 83556379 -5948174 - LTR24B LTR ERV1 -6 570 511 376 175 0 0 chr17 83556479 83556542 -5948011 + Alu SINE Alu 236 298 -4 570 168 11 0 chr17 83556569 83556664 -5947889 - Charlie5 DNA MER1_type -2507 105 10 243 0 0 0 chr17 83556664 83556691 -5947862 + (CA)n Simple_repeat Simple_repeat 2 28 0 518 213 181 16 chr17 83556691 83556879 -5947674 - MLT1G1 LTR MaLR -361 234 16 488 267 36 36 chr17 83557053 83557218 -5947335 + L2 LINE L2 3149 3313 0 1726 172 0 31 chr17 83557905 83558227 -5946326 - AluJb SINE Alu 0 313 1 183 80 0 0 chr17 83558227 83558252 -5946301 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 1092 176 164 0 chr17 83558259 83558358 -5946195 - L1PA16 LINE L1 0 6166 6085 698 10 0 39 chr17 83558358 83558461 -5946092 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 2194 106 3 0 chr17 83558461 83558738 -5945815 - AluSg SINE Alu -32 278 1 1092 176 164 0 chr17 83558738 83558898 -5945655 - L1PA16 LINE L1 -80 6086 5869 2463 58 0 38 chr17 83558905 83559218 -5945335 - AluY SINE Alu -10 301 1 2141 114 3 13 chr17 83559241 83559573 -5944980 - AluSx SINE Alu 0 329 1 281 325 0 0 chr17 83559617 83559700 -5944853 + MIR SINE MIR 78 160 -102 1117 273 61 72 chr17 83559728 83559939 -5944614 - MER77 LTR ERV1 -4 601 389 2126 128 0 0 chr17 83559939 83560254 -5944299 + AluSg SINE Alu 1 315 0 1117 273 61 72 chr17 83560254 83560679 -5943874 - MER77 LTR ERV1 -216 389 54 245 233 60 60 chr17 83561014 83561164 -5943389 - LTR58 LTR ERV1 -17 662 513 484 188 69 42 chr17 83561193 83561337 -5943216 - LTR43 LTR ERV1 -281 321 174 636 195 15 97 chr17 83561571 83561660 -5942893 - LTR39 LTR ERV1 -77 706 639 2155 85 4 4 chr17 83561660 83561953 -5942600 - AluSq SINE Alu 0 307 15 636 195 15 97 chr17 83561953 83562057 -5942496 - LTR39 LTR ERV1 -144 639 528 * 1725 157 48 51 chr17 83562052 83562447 -5942106 - LTR39 LTR ERV1 -388 395 2 2114 187 26 91 chr17 83563100 83563241 -5941312 - MER34B LTR ERV1 0 565 416 2407 77 0 0 chr17 83563241 83563528 -5941025 - AluSx SINE Alu 0 312 26 2114 187 26 91 chr17 83563528 83563990 -5940563 - MER34B LTR ERV1 -149 416 1 323 285 38 25 chr17 83564191 83564349 -5940204 + L1ME4a LINE L1 5961 6120 -1 2220 124 13 0 chr17 83564372 83564679 -5939874 - AluSx SINE Alu -1 311 1 1667 179 23 36 chr17 83565756 83566057 -5938496 - AluJo SINE Alu -15 297 1 952 103 14 41 chr17 83566180 83566326 -5938227 + AluSg/x SINE Alu 135 276 -34 321 305 62 9 chr17 83566824 83567012 -5937541 - MIR SINE MIR -13 195 48 380 281 97 0 chr17 83567170 83567284 -5937269 + MIR SINE MIR 48 172 -90 * 523 286 47 0 chr17 83567276 83567447 -5937106 - MER91A DNA MER1_type -17 179 1 2559 18 7 3 chr17 83567902 83568186 -5936367 + AluY SINE Alu 1 285 -26 395 250 71 52 chr17 83568303 83568571 -5935982 + L1MC5 LINE L1 7403 7675 -286 594 161 32 116 chr17 83568606 83568724 -5935829 + U4 snRNA snRNA 3 107 -38 2460 93 0 0 chr17 83568724 83569025 -5935528 - AluSx SINE Alu -11 301 1 594 161 32 116 chr17 83569025 83569061 -5935492 + U4 snRNA snRNA 107 144 -1 1172 135 22 0 chr17 83569127 83569312 -5935241 + AluJo SINE Alu 121 309 -3 567 236 44 54 chr17 83569314 83569426 -5935127 + L1MC5 LINE L1 7713 7824 -137 819 152 0 0 chr17 83569426 83569558 -5934995 - FLAM_C SINE Alu -1 132 1 567 236 44 54 chr17 83569558 83569648 -5934905 + L1MC5 LINE L1 7824 7913 -48 355 146 0 0 chr17 83571219 83571274 -5933279 + MER66A LTR ERV1 287 341 -137 198 0 0 0 chr17 83571274 83571296 -5933257 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr17 83571398 83571422 -5933131 + AT_rich Low_complexity Low_complexity 1 24 0 1583 170 0 19 chr17 83571558 83571829 -5932724 - AluJo SINE Alu -8 304 39 363 182 0 0 chr17 83573381 83573458 -5931095 + L1ME2 LINE L1 6087 6163 -1 255 185 0 64 chr17 83573469 83573539 -5931014 - L1ME3 LINE L1 -99 6065 6000 250 255 75 28 chr17 83573680 83573786 -5930767 + MIR3 SINE MIR 91 201 -7 206 174 22 0 chr17 83574657 83574703 -5929850 + A-rich Low_complexity Low_complexity 3 49 0 447 226 68 41 chr17 83575845 83575991 -5928562 + L1ME2 LINE L1 6005 6154 -10 1851 99 22 89 chr17 83575994 83576142 -5928411 + AluSq SINE Alu 10 128 -185 489 34 0 0 chr17 83576142 83576201 -5928352 + (CA)n Simple_repeat Simple_repeat 2 60 0 1851 99 22 89 chr17 83576201 83576365 -5928188 + AluSq SINE Alu 128 301 -12 2251 112 3 13 chr17 83576367 83576680 -5927873 + AluSx SINE Alu 1 310 -2 539 261 149 19 chr17 83576740 83577008 -5927545 + L1ME3A LINE L1 5851 6153 -17 1857 144 60 0 chr17 83578700 83578984 -5925569 - AluJb SINE Alu -9 303 3 383 246 55 0 chr17 83579121 83579231 -5925322 + MIR3 SINE MIR 82 197 -11 21 0 0 0 chr17 83579763 83579784 -5924769 + GC_rich Low_complexity Low_complexity 1 21 0 195 171 24 37 chr17 83579922 83580004 -5924549 + G-rich Low_complexity Low_complexity 5 85 0 272 285 7 21 chr17 83580286 83580430 -5924123 + G-rich Low_complexity Low_complexity 1 142 0 813 262 69 10 chr17 83581191 83581481 -5923072 + MARNA DNA Mariner 36 342 -244 2616 40 0 3 chr17 83581481 83581780 -5922773 + AluY SINE Alu 1 298 -13 2066 112 10 26 chr17 83581815 83582118 -5922435 + AluSq SINE Alu 9 306 -7 735 186 67 10 chr17 83582121 83582315 -5922238 + L1MC5 LINE L1 7312 7516 -445 954 179 16 5 chr17 83582434 83582618 -5921935 - AluJo SINE Alu -7 305 120 1984 103 29 29 chr17 83582627 83582939 -5921614 - AluSg SINE Alu 0 312 1 3803 68 14 0 chr17 83582944 83583442 -5921111 + LTR8 LTR ERV1 187 691 0 244 246 96 72 chr17 83583502 83583669 -5920884 - MER110A LTR ERV1 -297 171 1 1688 158 40 19 chr17 83583692 83584017 -5920536 + MSTB LTR MaLR 5 344 -82 2499 97 3 0 chr17 83584070 83584381 -5920172 + AluSp SINE Alu 1 312 -1 532 91 0 0 chr17 83584402 83584479 -5920074 + MSTB LTR MaLR 351 427 -1 713 211 14 146 chr17 83584529 83584823 -5919730 - MLT1J LTR MaLR -250 261 7 227 86 103 0 chr17 83584884 83584942 -5919611 + GA-rich Low_complexity Low_complexity 2 65 0 662 165 25 6 chr17 83584981 83585104 -5919449 + GA-rich Low_complexity Low_complexity 1 129 -32 2323 91 7 16 chr17 83585104 83585411 -5919142 + AluY SINE Alu 1 304 -7 662 165 25 6 chr17 83585411 83585445 -5919108 + GA-rich Low_complexity Low_complexity 129 161 0 1621 173 23 46 chr17 83585457 83585805 -5918748 + AluJo SINE Alu 13 353 0 411 348 110 16 chr17 83585944 83586318 -5918235 - L2 LINE L2 -1116 2198 1790 1726 163 0 69 chr17 83586385 83586520 -5918033 + AluJb SINE Alu 1 144 -168 2109 115 6 46 chr17 83586520 83586843 -5917710 - AluSx SINE Alu -2 310 1 1726 163 0 69 chr17 83586843 83587027 -5917526 + AluJb SINE Alu 144 298 -14 2450 84 0 0 chr17 83587322 83587621 -5916932 - AluSx SINE Alu -12 300 2 2132 134 0 31 chr17 83588106 83588427 -5916126 + AluJo SINE Alu 1 311 -1 2251 88 17 10 chr17 83588756 83589053 -5915500 + AluSx SINE Alu 3 301 -11 199 258 65 16 chr17 83589635 83589697 -5914856 - L2 LINE L2 -8 3264 3200 2373 97 0 0 chr17 83589710 83590000 -5914553 + AluSq SINE Alu 1 290 -23 1677 157 54 0 chr17 83590394 83590655 -5913898 + AluJb SINE Alu 21 295 -17 1995 108 7 28 chr17 83590657 83590987 -5913566 + AluSx SINE Alu 1 324 0 2030 101 18 0 chr17 83592526 83592890 -5911663 + AluSx SINE Alu 1 369 0 1017 257 153 25 chr17 83593175 83593607 -5910946 - MLT1D LTR MaLR -18 487 1 2255 112 0 0 chr17 83593630 83593934 -5910619 + AluSx SINE Alu 1 304 -8 2377 90 0 24 chr17 83593943 83594327 -5910226 + L1PA8A LINE L1 5805 6180 0 308 186 255 29 chr17 83594997 83595099 -5909454 - MIR SINE MIR -118 144 20 2105 115 3 0 chr17 83595114 83595410 -5909143 - AluSx SINE Alu -15 297 1 2066 83 32 0 chr17 83595985 83596263 -5908290 + AluSq SINE Alu 3 289 -24 333 47 0 0 chr17 83596266 83596309 -5908244 + (TAA)n Simple_repeat Simple_repeat 3 45 0 1898 158 0 0 chr17 83596900 83597198 -5907355 - AluJb SINE Alu -14 298 1 28 61 0 0 chr17 83597323 83597372 -5907181 + AT_rich Low_complexity Low_complexity 1 49 0 2151 110 0 28 chr17 83597502 83597821 -5906732 - AluSx SINE Alu 0 312 3 696 158 0 0 chr17 83597821 83597922 -5906631 - AluSg/x SINE Alu -16 293 193 2652 20 0 3 chr17 83597922 83598228 -5906325 - AluY SINE Alu -6 305 1 189 0 0 0 chr17 83598241 83598262 -5906291 + (CAA)n Simple_repeat Simple_repeat 1 21 0 865 169 47 0 chr17 83598598 83598746 -5905807 + MSTB LTR MaLR 272 426 0 1420 235 35 51 chr17 83598831 83599226 -5905327 + MLT1B LTR MaLR 1 389 -1 547 259 19 104 chr17 83599491 83599800 -5904753 - HAL1 LINE L1 0 2507 2225 3402 182 197 15 chr17 83600449 83601376 -5903177 - MER52C LTR ERV1 -1 1277 1 547 220 37 0 chr17 83601377 83601486 -5903067 + MER81 DNA DNA 1 113 -1 710 298 39 61 chr17 83601504 83601623 -5902930 - HAL1 LINE L1 -700 1807 1687 2409 74 0 0 chr17 83601623 83601934 -5902619 + AluY SINE Alu 1 311 0 574 110 0 0 chr17 83601944 83602026 -5902527 + L1MA9 LINE L1 6226 6307 -5 710 298 39 61 chr17 83602026 83602630 -5901923 - HAL1 LINE L1 -829 1678 813 360 326 177 0 chr17 83603289 83603470 -5901083 - MIR SINE MIR 0 262 50 3597 80 108 4 chr17 83603907 83604409 -5900144 + MER41A LTR ERV1 1 554 0 2587 118 15 7 chr17 83604424 83604831 -5899722 + MER41E LTR ERV1 15 424 -88 255 128 43 0 chr17 83605467 83605514 -5899039 - MIR3 SINE MIR -44 164 116 218 266 59 24 chr17 83605571 83605740 -5898813 + (CCCGG)n Simple_repeat Simple_repeat 1 175 0 29 79 0 11 chr17 83605809 83605846 -5898707 + GC_rich Low_complexity Low_complexity 1 37 -51 192 77 0 0 chr17 83605846 83605872 -5898681 + (GTCTG)n Simple_repeat Simple_repeat 1 26 0 29 79 0 11 chr17 83605872 83605923 -5898630 + GC_rich Low_complexity Low_complexity 37 88 0 367 290 0 0 chr17 83606204 83606297 -5898256 + (TG)n Simple_repeat Simple_repeat 2 94 0 253 196 0 0 chr17 83606316 83606367 -5898186 + MER4-int LTR ERV1 1112 1162 -5436 216 278 0 0 chr17 83606368 83606422 -5898131 + (TATG)n Simple_repeat Simple_repeat 1 54 0 348 307 0 0 chr17 83606426 83606605 -5897948 + (TG)n Simple_repeat Simple_repeat 2 180 0 435 287 7 0 chr17 83606639 83606934 -5897619 + (TG)n Simple_repeat Simple_repeat 1 297 0 258 281 107 0 chr17 83608054 83608175 -5896378 - MIR SINE MIR -92 170 37 * 513 281 62 31 chr17 83608171 83608431 -5896122 + L2 LINE L2 2931 3198 -74 215 340 120 21 chr17 83609968 83610209 -5894344 + L2 LINE L2 2815 3079 -193 1173 134 0 6 chr17 83610553 83610732 -5893821 - AluSp SINE Alu -2 311 134 2277 88 3 0 chr17 83610732 83611028 -5893525 - AluSx SINE Alu -13 299 3 780 251 0 0 chr17 83611048 83611211 -5893342 - FAM SINE Alu -1 48 1 723 220 14 54 chr17 83611220 83611259 -5893294 - L1MDb LINE L1 -3114 3292 3253 1555 184 23 13 chr17 83611259 83611568 -5892985 + AluJb SINE Alu 1 312 0 723 220 14 54 chr17 83611568 83611751 -5892802 - L1MDb LINE L1 -3153 3253 3079 1441 131 0 82 chr17 83611751 83612033 -5892520 - AluSx SINE Alu -12 300 42 3122 215 82 50 chr17 83612034 83612655 -5891898 - L1MDb LINE L1 -4724 1682 1083 2176 118 7 0 chr17 83612655 83612960 -5891593 + AluSx SINE Alu 1 307 -5 3122 215 82 50 chr17 83612960 83613533 -5891020 - L1MDb LINE L1 -5323 1083 316 2148 93 43 7 chr17 83613536 83613838 -5890715 - AluSq SINE Alu 0 313 1 1320 150 21 9 chr17 83613838 83614071 -5890482 - AluJo SINE Alu -12 300 65 457 261 14 22 chr17 83614229 83614506 -5890047 + (CACCAT)n Simple_repeat Simple_repeat 1 275 0 284 328 11 17 chr17 83614285 83614459 -5890094 + CT-rich Low_complexity Low_complexity 1 173 0 * 361 260 17 28 chr17 83614486 83614667 -5889886 + CT-rich Low_complexity Low_complexity 1 179 0 1892 100 44 127 chr17 83615809 83616141 -5888412 + THE1C LTR MaLR 1 294 -81 2251 97 7 3 chr17 83616141 83616451 -5888102 + AluSq SINE Alu 1 311 -2 1892 100 44 127 chr17 83616451 83616527 -5888026 + THE1C LTR MaLR 294 375 0 2009 118 17 0 chr17 83617182 83617471 -5887082 - AluSx SINE Alu -18 294 1 1836 173 0 10 chr17 83617654 83617960 -5886593 - AluJo SINE Alu -9 303 1 1443 154 0 12 chr17 83618100 83618347 -5886206 - AluSg/x SINE Alu -2 310 67 26 0 0 0 chr17 83620232 83620258 -5884295 + AT_rich Low_complexity Low_complexity 1 26 0 223 321 36 45 chr17 83620858 83620970 -5883583 - L2 LINE L2 -10 3303 3193 453 98 0 0 chr17 83621146 83621207 -5883346 + FRAM/FAM SINE Alu 16 76 -100 332 68 0 0 chr17 83621207 83621251 -5883302 + AluJ/F(R)AM SINE Alu 169 212 -90 674 209 16 0 chr17 83621251 83621380 -5883173 + FAM SINE Alu 33 163 -22 2160 123 0 0 chr17 83621689 83621999 -5882554 - AluSg SINE Alu 0 310 1 217 200 238 0 chr17 83622001 83622081 -5882472 + MIR SINE MIR 127 225 -37 2307 97 0 3 chr17 83622462 83622770 -5881783 - AluSx SINE Alu -5 307 1 187 260 20 0 chr17 83624538 83624588 -5879965 - L2 LINE L2 -2 3270 3220 231 61 0 0 chr17 83626151 83626184 -5878369 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 2210 99 0 0 chr17 83626184 83626468 -5878085 - AluSx SINE Alu -25 287 1 1348 70 0 0 chr17 83626479 83626650 -5877903 - AluSp SINE Alu -12 301 131 1636 94 5 5 chr17 83626751 83626974 -5877579 + AluSp SINE Alu 67 289 -24 751 184 0 22 chr17 83626977 83627113 -5877440 - AluJo/FLAM SINE Alu -169 133 1 2205 100 0 10 chr17 83627818 83628129 -5876424 - AluSx SINE Alu -4 308 1 360 0 0 0 chr17 83628325 83628365 -5876188 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1579 180 4 11 chr17 83628371 83628649 -5875904 - AluJo SINE Alu -31 281 6 847 130 0 55 chr17 83628651 83628797 -5875756 - AluJo SINE Alu -174 138 1 328 240 62 0 chr17 83628797 83628893 -5875660 - LTR33A LTR ERVL -35 488 387 3282 246 71 38 chr17 83628934 83629157 -5875396 - MER69B DNA AcHobo -1393 1133 919 2155 129 0 0 chr17 83629157 83629468 -5875085 + AluJb SINE Alu 1 311 -1 2163 118 0 3 chr17 83629472 83629776 -5874777 + AluSx SINE Alu 1 303 -9 3282 246 71 38 chr17 83629776 83630599 -5873954 - MER69B DNA AcHobo -1609 917 47 650 282 94 19 chr17 83630608 83630973 -5873580 - LTR33A LTR ERVL -119 404 39 1326 213 62 69 chr17 83631234 83631623 -5872930 + MLT1B LTR MaLR 1 386 -4 228 128 51 0 chr17 83631632 83631671 -5872882 - MLT2C1 LTR ERVL 0 397 357 195 100 0 0 chr17 83631671 83631701 -5872852 + (TGGA)n Simple_repeat Simple_repeat 3 32 0 643 167 40 11 chr17 83631726 83631900 -5872653 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 2023 134 0 3 chr17 83631905 83632204 -5872349 + AluSx SINE Alu 1 298 -14 498 163 34 22 chr17 83632204 83632382 -5872171 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2268 202 115 2 chr17 83632387 83632867 -5871686 - MLT2B3 LTR ERVL -20 534 1 761 295 181 14 chr17 83632975 83633405 -5871148 - L2 LINE L2 -1 3312 2811 246 62 0 0 chr17 83634138 83634170 -5870383 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 774 226 0 0 chr17 83634180 83634313 -5870240 - FRAM SINE Alu -43 133 1 208 254 75 15 chr17 83634434 83634501 -5870052 - MIR SINE MIR -80 128 58 407 214 10 0 chr17 83634657 83634755 -5869798 - MER53 DNA DNA -28 161 63 706 258 0 25 chr17 83634755 83634914 -5869639 + FRAM SINE Alu 1 152 -24 368 145 0 0 chr17 83634914 83634976 -5869577 + MER53 DNA DNA 128 189 0 989 142 0 7 chr17 83635432 83635587 -5868966 - AluSg/x SINE Alu -15 297 144 253 222 11 11 chr17 83636049 83636139 -5868414 + CT-rich Low_complexity Low_complexity 1 90 0 2332 77 0 3 chr17 83636689 83636989 -5867564 + AluSx SINE Alu 1 299 -13 308 319 35 0 chr17 83637107 83637220 -5867333 - L1ME3 LINE L1 -3 6159 6043 193 303 11 56 chr17 83637240 83637329 -5867224 - MIR SINE MIR -110 152 68 2360 79 0 22 chr17 83637335 83637653 -5866900 + AluSp SINE Alu 3 313 0 1974 103 39 0 chr17 83638092 83638373 -5866180 + AluSp SINE Alu 1 292 -21 1832 157 0 23 chr17 83638377 83638683 -5865870 + AluJo SINE Alu 1 299 -13 279 0 0 0 chr17 83638731 83638762 -5865791 + (TC)n Simple_repeat Simple_repeat 1 31 0 216 0 0 0 chr17 83638761 83638785 -5865768 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 885 176 85 11 chr17 83639044 83639220 -5865333 + MER53 DNA DNA 1 189 0 309 341 20 3 chr17 83639743 83639895 -5864658 - MIR SINE MIR -72 136 35 299 206 278 0 chr17 83639918 83640015 -5864538 - MER5B DNA MER1_type -35 143 20 2386 82 0 0 chr17 83640273 83640579 -5863974 + AluSq SINE Alu 1 306 -7 442 248 31 16 chr17 83641124 83641253 -5863300 - MER103 DNA DNA -1 165 35 1240 96 5 58 chr17 83641951 83642063 -5862490 + AluSx SINE Alu 1 101 -211 2221 106 3 13 chr17 83642063 83642239 -5862314 - AluSq SINE Alu -4 309 136 2150 110 7 0 chr17 83642239 83642538 -5862015 - AluSg SINE Alu -9 301 1 2221 106 3 13 chr17 83642538 83642673 -5861880 - AluSq SINE Alu -177 136 1 1240 96 5 58 chr17 83642673 83642748 -5861805 + AluSx SINE Alu 101 178 -134 429 277 15 23 chr17 83643540 83643670 -5860883 - MIR SINE MIR -118 144 16 970 219 21 0 chr17 83645912 83646221 -5858332 + L1MDb LINE L1 5 306 -6103 1675 147 44 7 chr17 83646221 83646513 -5858040 + AluJo SINE Alu 1 303 -9 2128 96 48 0 chr17 83646513 83646806 -5857747 + AluSq SINE Alu 1 307 -6 970 219 21 0 chr17 83646514 83647330 -5857223 + L1MDb LINE L1 306 996 -5413 2028 62 4 8 chr17 83647431 83647691 -5856862 + AluY SINE Alu 42 300 -11 28 0 0 0 chr17 83648207 83648235 -5856318 + AT_rich Low_complexity Low_complexity 1 28 0 2109 132 3 0 chr17 83648240 83648550 -5856003 + AluSx SINE Alu 1 311 -1 243 119 24 0 chr17 83648552 83648594 -5855959 + ORSL DNA AcHobo 191 233 -42 806 164 52 0 chr17 83650123 83650257 -5854296 - FLAM_C SINE Alu -2 141 1 2158 106 7 7 chr17 83650506 83650809 -5853744 - AluSx SINE Alu -9 303 1 395 316 116 14 chr17 83650852 83651067 -5853486 - MIR SINE MIR -20 242 6 2123 118 76 25 chr17 83652051 83652408 -5852145 + THE1C LTR MaLR 1 375 0 33 0 0 0 chr17 83653120 83653153 -5851400 + AT_rich Low_complexity Low_complexity 1 33 0 2268 52 0 21 chr17 83653219 83653527 -5851026 - AluSq SINE Alu 0 302 1 828 203 12 0 chr17 83653537 83653700 -5850853 - L1MD1 LINE L1 0 6242 6078 2188 118 0 3 chr17 83653706 83654011 -5850542 - AluSx SINE Alu -8 304 1 1459 193 60 44 chr17 83654047 83654155 -5850398 - L1MD1 LINE L1 -550 5692 5587 1903 153 7 3 chr17 83654155 83654450 -5850103 + AluJb SINE Alu 3 298 -14 1459 193 60 44 chr17 83654450 83654725 -5849828 - L1MD1 LINE L1 -655 5587 5303 23 54 0 0 chr17 83654960 83654997 -5849556 + GC_rich Low_complexity Low_complexity 1 37 0 291 245 13 60 chr17 83655137 83655288 -5849265 + (CGGGG)n Simple_repeat Simple_repeat 5 148 0 257 128 43 0 chr17 83655343 83655390 -5849163 + MIR3 SINE MIR 116 164 -44 2051 104 9 55 chr17 83656953 83657279 -5847274 - AluSq SINE Alu 0 313 3 2181 107 0 3 chr17 83657279 83657579 -5846974 - AluSx SINE Alu -13 299 1 2221 102 0 31 chr17 83657581 83657904 -5846649 - AluSq SINE Alu 0 313 1 252 0 0 0 chr17 83658138 83658166 -5846387 + (TCC)n Simple_repeat Simple_repeat 3 30 0 217 372 34 34 chr17 83658166 83658314 -5846239 + MIR SINE MIR 79 226 -36 616 153 0 81 chr17 83658434 83658519 -5846034 + FLAM_A SINE Alu 29 119 -466 2475 51 0 16 chr17 83658519 83658833 -5845720 - AluY SINE Alu -1 310 2 616 153 0 81 chr17 83658833 83658881 -5845672 + FLAM_A SINE Alu 119 169 -416 2244 97 7 3 chr17 83658881 83659191 -5845362 + AluSx SINE Alu 1 311 -1 616 153 0 81 chr17 83659191 83659314 -5845239 + FLAM_A SINE Alu 169 585 0 2143 125 3 0 chr17 83659320 83659631 -5844922 + AluSx SINE Alu 1 312 0 372 352 26 18 chr17 83659633 83659860 -5844693 + MLT1G1-int LTR MaLR 313 541 -830 319 105 12 0 chr17 83660132 83660217 -5844336 + Alu SINE Alu 2 46 -253 1822 224 39 13 chr17 83660217 83660676 -5843877 + L1MC2 LINE L1 5872 6342 -2 2323 91 3 0 chr17 83660712 83661021 -5843532 - AluSp SINE Alu -3 310 1 2243 102 3 0 chr17 83661064 83661367 -5843186 - AluSx SINE Alu -8 304 1 232 265 59 0 chr17 83661647 83661715 -5842838 + MLT1G1-int LTR MaLR 1275 1346 -25 344 266 21 0 chr17 83661736 83661830 -5842723 + MLT1G1 LTR MaLR 2 97 -498 281 387 65 0 chr17 83662031 83662199 -5842354 + MLT1G1 LTR MaLR 94 272 -321 * 352 260 24 8 chr17 83662195 83662318 -5842235 + MLT1G LTR MaLR 149 273 -317 613 203 163 50 chr17 83662322 83662524 -5842029 - MLT1E1 LTR MaLR 0 654 430 2038 142 7 3 chr17 83662524 83662551 -5842002 - AluSq SINE Alu -3 310 285 396 0 0 0 chr17 83662551 83662595 -5841958 + (TG)n Simple_repeat Simple_repeat 1 44 0 2038 142 7 3 chr17 83662595 83662876 -5841677 - AluSq SINE Alu -28 285 1 219 0 95 24 chr17 83662882 83662924 -5841629 + T-rich Low_complexity Low_complexity 1 45 0 809 88 71 0 chr17 83663066 83663179 -5841374 + AluSg/x SINE Alu 88 208 -104 1773 174 3 0 chr17 83663215 83663513 -5841040 + AluJo SINE Alu 6 304 -8 491 302 88 79 chr17 83663587 83663797 -5840756 - L1ME4a LINE L1 -5 6116 5909 2016 155 0 0 chr17 83663797 83664101 -5840452 + AluSx SINE Alu 1 304 -8 491 302 88 79 chr17 83664101 83664144 -5840409 - L1ME4a LINE L1 -212 5909 5868 1903 143 3 3 chr17 83664144 83664444 -5840109 - AluSx SINE Alu -12 300 1 491 302 88 79 chr17 83664444 83664459 -5840094 - L1ME4a LINE L1 -253 5868 5855 562 183 29 0 chr17 83664459 83664563 -5839990 - L1MB5 LINE L1 -8 6166 6060 491 302 88 79 chr17 83664563 83664749 -5839804 - L1ME4a LINE L1 -266 5855 5656 724 331 177 16 chr17 83664761 83665452 -5839101 + L2 LINE L2 2176 2977 -337 1457 146 4 4 chr17 83665641 83665881 -5838672 - AluSg/x SINE Alu -8 304 65 2269 93 0 10 chr17 83665999 83666312 -5838241 + AluSx SINE Alu 1 310 -2 344 336 21 0 chr17 83666337 83666477 -5838076 - L1ME4a LINE L1 -482 5639 5497 2097 108 0 49 chr17 83666765 83667090 -5837463 + AluSg SINE Alu 1 309 -1 332 245 108 0 chr17 83667193 83667295 -5837258 - MLT1E1 LTR MaLR -201 389 277 693 138 9 17 chr17 83667545 83667661 -5836892 - AluJb SINE Alu 0 312 198 315 0 0 0 chr17 83667762 83667797 -5836756 + (TG)n Simple_repeat Simple_repeat 2 36 0 1905 117 44 0 chr17 83667797 83668070 -5836483 - AluSx SINE Alu -27 285 1 729 149 66 0 chr17 83668544 83668665 -5835888 + FLAM_C SINE Alu 2 130 -3 1515 100 4 39 chr17 83668754 83669014 -5835539 + AluSg SINE Alu 1 251 -59 626 268 73 55 chr17 83669942 83670214 -5834339 - MER115 DNA AcHobo -260 433 157 368 254 9 98 chr17 83670214 83670438 -5834115 - MER3 DNA MER1_type -5 204 1 229 267 13 13 chr17 83670438 83670505 -5834048 - MER115 DNA AcHobo -528 165 99 194 301 165 19 chr17 83670601 83670704 -5833849 + L2 LINE L2 3179 3296 -17 2081 104 14 0 chr17 83670840 83671127 -5833426 - AluSx SINE Alu -21 291 1 21 36 0 0 chr17 83671130 83671158 -5833395 + AT_rich Low_complexity Low_complexity 1 28 0 1319 148 144 4 chr17 83671171 83671444 -5833109 + AluJb SINE Alu 10 316 0 505 326 89 2 chr17 83671445 83671663 -5832890 - MIR SINE MIR -12 250 17 306 255 128 0 chr17 83672998 83673100 -5831453 + MIR SINE MIR 79 193 -69 214 246 14 14 chr17 83673172 83673241 -5831312 + L2 LINE L2 2994 3062 -210 252 257 97 53 chr17 83674644 83674757 -5829796 - MIR SINE MIR -111 151 34 308 125 0 18 chr17 83675383 83675439 -5829114 + (TCCA)n Simple_repeat Simple_repeat 4 58 0 1884 156 10 7 chr17 83675539 83675841 -5828712 - AluJo SINE Alu -9 303 1 2070 106 0 11 chr17 83676010 83676294 -5828259 - AluSx SINE Alu -31 281 1 1299 232 126 53 chr17 83676955 83677390 -5827163 + MLT1C LTR MaLR 1 467 0 181 303 66 57 chr17 83677658 83677780 -5826773 + L2 LINE L2 3145 3267 -5 543 235 100 0 chr17 83678842 83679012 -5825541 - MER3 DNA MER1_type -22 187 1 1130 157 0 0 chr17 83679737 83679915 -5824638 - AluJb SINE Alu -6 306 129 1244 179 122 15 chr17 83679931 83680193 -5824360 + AluSg1 SINE Alu 1 290 -19 1875 146 0 23 chr17 83680193 83680495 -5824058 - AluSx SINE Alu -16 296 2 199 306 16 0 chr17 83681199 83681261 -5823292 - L2 LINE L2 -213 3059 2997 2370 84 0 0 chr17 83681301 83681598 -5822955 - AluSg SINE Alu -13 297 1 357 214 71 0 chr17 83682036 83682134 -5822419 + MER103 DNA DNA 18 122 -44 909 226 0 10 chr17 83682705 83682900 -5821653 - AluJo SINE Alu 0 312 120 532 287 12 0 chr17 83683143 83683310 -5821243 - MLT1D LTR MaLR 0 505 337 2594 111 13 0 chr17 83683326 83683715 -5820838 + MER1A DNA MER1_type 42 435 -94 241 88 0 0 chr17 83683716 83683750 -5820803 + AluSg SINE Alu 1 34 -265 792 98 0 0 chr17 83683783 83683885 -5820668 + AluSg SINE Alu 1 102 -208 1811 111 0 0 chr17 83683985 83684253 -5820300 + AluSg SINE Alu 38 305 0 698 144 0 0 chr17 83684253 83684364 -5820189 + MER1A DNA MER1_type 419 529 0 584 285 41 38 chr17 83684373 83684692 -5819861 - MLT1D LTR MaLR -179 326 7 225 0 0 0 chr17 83686387 83686412 -5818141 + (GGA)n Simple_repeat Simple_repeat 2 26 0 216 158 0 0 chr17 83687046 83687084 -5817469 + (TG)n Simple_repeat Simple_repeat 2 39 0 2283 62 38 0 chr17 83687571 83687862 -5816691 - AluY SINE Alu -9 302 1 245 276 26 13 chr17 83688245 83688321 -5816232 - MIR3 SINE MIR -26 182 106 334 206 0 0 chr17 83688784 83688852 -5815701 + MIR SINE MIR 81 148 -60 1179 230 78 49 chr17 83690039 83690487 -5814066 - MLT1C LTR MaLR 0 467 7 1314 207 46 29 chr17 83690697 83690977 -5813576 - L1M3 LINE L1 -718 5462 5174 2247 108 0 0 chr17 83690977 83691274 -5813279 - AluSx SINE Alu -13 299 3 1314 207 46 29 chr17 83691274 83691488 -5813065 - L1M3 LINE L1 -1006 5174 4965 453 291 106 49 chr17 83692367 83692755 -5811798 - L2 LINE L2 0 3272 2863 2198 168 101 5 chr17 83692756 83693202 -5811351 + MER21B LTR ERV1 1 489 -374 2188 107 0 0 chr17 83694522 83694821 -5809732 - AluSx SINE Alu -13 299 1 692 292 135 5 chr17 83694830 83695312 -5809241 - L2 LINE L2 -16 3297 2753 183 139 0 0 chr17 83695525 83695561 -5808992 + (CCCTG)n Simple_repeat Simple_repeat 1 36 0 842 158 8 0 chr17 83697218 83697351 -5807202 + AluJo SINE Alu 1 134 -178 352 306 52 83 chr17 83698097 83698139 -5806414 - L1MC4 LINE L1 0 8042 8000 1906 158 0 10 chr17 83698139 83698456 -5806097 + AluJb SINE Alu 1 312 0 352 306 52 83 chr17 83698456 83698642 -5805911 - L1MC4 LINE L1 -42 8000 7821 930 223 88 40 chr17 83698682 83699539 -5805014 - L1ME2 LINE L1 -10 6154 5169 763 203 0 0 chr17 83699539 83699672 -5804881 - FLAM_C SINE Alu 0 133 1 930 223 88 40 chr17 83699672 83699993 -5804560 - L1ME2 LINE L1 -995 5169 4865 253 269 15 31 chr17 83699966 83700096 -5804457 - L1ME LINE L1 -731 5431 5304 * 2444 59 0 3 chr17 83700287 83700590 -5803963 + AluY SINE Alu 1 302 -9 962 206 16 113 chr17 83700603 83701092 -5803461 - L1ME LINE L1 -868 5278 4837 303 253 0 63 chr17 83701268 83701458 -5803095 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 314 253 0 63 chr17 83701500 83701690 -5802863 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 1588 221 110 48 chr17 83701743 83702632 -5801921 - L1ME LINE L1 -1301 4845 3877 803 191 289 19 chr17 83703358 83703683 -5800870 - MER96B DNA MER1_type? -4 413 1 2248 93 0 63 chr17 83703921 83704254 -5800299 - AluSx SINE Alu 0 312 1 806 197 101 118 chr17 83704499 83704701 -5799852 + L1MB8 LINE L1 5730 5934 -244 2241 110 0 0 chr17 83704701 83705009 -5799544 + AluJb SINE Alu 1 308 -4 806 197 101 118 chr17 83705009 83705211 -5799342 + L1MB8 LINE L1 5934 6129 -49 2105 81 15 0 chr17 83705211 83705507 -5799046 + AluSp SINE Alu 8 307 0 806 197 101 118 chr17 83705507 83705557 -5798996 + L1MB8 LINE L1 6129 6178 0 234 207 0 0 chr17 83705585 83705643 -5798910 + A-rich Low_complexity Low_complexity 1 58 0 498 365 62 23 chr17 83706151 83706455 -5798098 + L1M4 LINE L1 3364 3679 -2467 297 0 0 0 chr17 83706456 83706489 -5798064 + (CA)n Simple_repeat Simple_repeat 1 33 0 593 324 62 49 chr17 83706542 83706841 -5797712 + L1M4 LINE L1 4958 5264 -882 1735 160 39 0 chr17 83706841 83707122 -5797431 - AluJo SINE Alu -20 292 1 593 324 62 49 chr17 83707122 83707192 -5797361 + L1M4 LINE L1 5264 5332 -814 2340 95 0 0 chr17 83707423 83707727 -5796826 - AluSx SINE Alu -7 305 2 195 42 0 0 chr17 83708007 83708031 -5796522 + (T)n Simple_repeat Simple_repeat 1 24 0 2205 101 0 3 chr17 83708041 83708338 -5796215 + AluSg SINE Alu 1 296 -14 616 110 0 0 chr17 83708338 83708429 -5796124 - HY1 scRNA scRNA -21 91 1 307 220 46 37 chr17 83708486 83708595 -5795958 + MER34 LTR ERV1 429 538 -4 238 362 19 19 chr17 83708883 83708988 -5795565 + MIR SINE MIR 66 170 -92 312 294 34 10 chr17 83709663 83709782 -5794771 + MIR SINE MIR 34 156 -52 2252 98 0 10 chr17 83710083 83710389 -5794164 + AluSx SINE Alu 1 303 -9 373 279 120 25 chr17 83711339 83711497 -5793056 + MIR3 SINE MIR 22 194 -14 572 238 191 5 chr17 83711738 83711948 -5792605 - MLT1D LTR MaLR -1 504 256 548 250 45 11 chr17 83711981 83712157 -5792396 - MLT1D LTR MaLR -323 182 1 262 308 0 0 chr17 83712178 83712256 -5792297 + MIR SINE MIR 11 88 -174 432 252 69 44 chr17 83713404 83713563 -5790990 + MIR3 SINE MIR 3 165 -43 364 224 94 0 chr17 83715189 83715274 -5789279 + MIR SINE MIR 61 153 -55 763 280 17 29 chr17 83715289 83715528 -5789025 + MIR SINE MIR 11 246 -16 248 261 15 0 chr17 83717410 83717475 -5787078 + MLT1L LTR MaLR 540 605 -10 194 380 62 0 chr17 83717838 83717967 -5786586 - MIR SINE MIR -37 225 89 367 271 186 11 chr17 83718242 83718419 -5786134 - MIR SINE MIR -34 228 21 1854 147 27 7 chr17 83718684 83718984 -5785569 - AluJb SINE Alu -6 306 1 410 297 69 0 chr17 83719014 83719159 -5785394 + L1ME4a LINE L1 5918 6072 -49 1531 133 129 19 chr17 83719206 83719477 -5785076 - AluJo SINE Alu 0 302 2 2214 122 0 0 chr17 83719519 83719830 -5784723 - AluSx SINE Alu -1 311 1 214 286 39 13 chr17 83721334 83721411 -5783142 + (CCCCAG)n Simple_repeat Simple_repeat 6 84 0 231 264 85 101 chr17 83721873 83722002 -5782551 + MIR3 SINE MIR 79 205 -3 342 256 33 0 chr17 83722357 83722447 -5782106 + MIR SINE MIR 29 121 -141 304 244 0 23 chr17 83723587 83723673 -5780880 + L2 LINE L2 3016 3099 -173 319 227 157 42 chr17 83723820 83724036 -5780517 - L2 LINE L2 -234 3079 2839 219 270 81 24 chr17 83724607 83724737 -5779816 - MIR SINE MIR -60 148 34 375 257 71 9 chr17 83725755 83725868 -5778685 - MIR SINE MIR -70 192 73 550 343 39 9 chr17 83726218 83726451 -5778102 + MIR SINE MIR 23 262 0 2068 124 0 7 chr17 83727208 83727506 -5777047 + AluSx SINE Alu 1 296 -16 248 315 101 7 chr17 83727630 83727779 -5776774 + MER5A DNA MER1_type 1 163 -26 1577 172 10 30 chr17 83728387 83728683 -5775870 + AluJb SINE Alu 1 290 -22 445 223 85 23 chr17 83729510 83729640 -5774913 + MIR SINE MIR 23 160 -102 2171 118 0 0 chr17 83731904 83732200 -5772353 + AluSx SINE Alu 1 296 -16 465 279 107 98 chr17 83733287 83733531 -5771022 - MIR SINE MIR 0 262 17 229 363 38 0 chr17 83733542 83733622 -5770931 - MIR SINE MIR -81 181 99 273 200 143 0 chr17 83734325 83734395 -5770158 - MER96B DNA MER1_type? -4 413 334 222 214 19 58 chr17 83734701 83734804 -5769749 + CT-rich Low_complexity Low_complexity 2 100 0 892 126 0 0 chr17 83735016 83735143 -5769410 - FLAM_C SINE Alu -16 127 1 1762 170 3 10 chr17 83735573 83735867 -5768686 - AluJo SINE Alu -20 292 1 2341 106 0 0 chr17 83736092 83736404 -5768149 + AluSx SINE Alu 1 312 0 339 303 83 42 chr17 83736412 83736478 -5768075 + L1MC4 LINE L1 7607 7669 -373 2086 135 0 13 chr17 83736478 83736789 -5767764 - AluSx SINE Alu -5 307 1 339 303 83 42 chr17 83736789 83737059 -5767494 + L1MC4 LINE L1 7669 7957 -85 1873 132 3 40 chr17 83739157 83739460 -5765093 + AluSx SINE Alu 6 297 -15 2838 16 0 0 chr17 83739740 83740058 -5764495 + AluYb8 SINE Alu 1 318 0 2137 125 0 0 chr17 83740298 83740594 -5763959 - AluSg SINE Alu -14 296 1 2452 57 0 0 chr17 83740601 83740900 -5763653 - AluY SINE Alu -12 299 1 366 329 14 21 chr17 83741332 83741475 -5763078 + MIR3 SINE MIR 19 160 -48 997 173 36 55 chr17 83741475 83741531 -5763022 + MER20 DNA MER1_type 1 56 -163 2176 110 0 16 chr17 83741531 83741839 -5762714 + AluSx SINE Alu 1 303 -9 997 173 36 55 chr17 83741839 83742002 -5762551 + MER20 DNA MER1_type 56 216 -3 2193 147 18 32 chr17 83742367 83742747 -5761806 - THE1C LTR MaLR 0 375 1 2289 100 10 0 chr17 83742758 83743077 -5761476 - AluSx SINE Alu 0 322 1 1821 146 40 13 chr17 83743153 83743454 -5761099 - AluJb SINE Alu -3 309 1 881 165 0 82 chr17 83743605 83743636 -5760917 - AluSg/x SINE Alu 0 310 278 2249 104 7 0 chr17 83743636 83743944 -5760609 - AluSq SINE Alu -3 310 1 881 165 0 82 chr17 83743944 83744106 -5760447 - AluSg/x SINE Alu -32 278 133 1968 121 35 0 chr17 83744650 83744939 -5759614 - AluSq SINE Alu -14 299 1 1905 112 56 0 chr17 83745231 83745517 -5759036 + AluSx SINE Alu 1 302 -10 257 198 0 165 chr17 83745705 83745826 -5758727 + L2 LINE L2 2745 2845 -469 252 333 17 56 chr17 83745948 83746128 -5758425 - MLT1I LTR MaLR 0 409 278 476 278 37 6 chr17 83746326 83746488 -5758065 + L2 LINE L2 2846 3012 -301 417 168 32 0 chr17 83746491 83746586 -5757967 + L1M LINE L1 5285 5382 -860 200 308 26 0 chr17 83746687 83746765 -5757788 + C-rich Low_complexity Low_complexity 3 82 0 329 131 16 0 chr17 83746789 83746850 -5757703 + C-rich Low_complexity Low_complexity 2 63 0 319 343 44 7 chr17 83747526 83747663 -5756890 - L1MC4 LINE L1 -1 8041 7900 959 196 0 0 chr17 83747781 83747944 -5756609 - FRAM SINE Alu -14 162 1 298 368 35 0 chr17 83748025 83748139 -5756414 + MIR SINE MIR 35 152 -110 408 274 173 24 chr17 83748152 83748360 -5756193 - MIR SINE MIR 0 262 24 1932 133 0 54 chr17 83748503 83748834 -5755719 + AluSq SINE Alu 1 313 0 970 252 59 28 chr17 83749137 83749458 -5755095 - MLT1J LTR MaLR -180 331 1 1702 149 20 26 chr17 83749676 83749978 -5754575 + AluJo SINE Alu 2 301 -11 2058 116 27 0 chr17 83750051 83750343 -5754210 + AluSq SINE Alu 5 304 -9 625 184 0 0 chr17 83750562 83750676 -5753877 - MER63A DNA MER1_type -45 165 52 2275 73 27 0 chr17 83750718 83751019 -5753534 - AluY SINE Alu -2 309 1 2220 94 0 13 chr17 83751079 83751387 -5753166 - AluSx SINE Alu -8 304 1 2414 35 0 0 chr17 83751783 83752095 -5752458 - AluY SINE Alu 0 312 1 411 287 92 19 chr17 83752969 83753230 -5751323 - L2 LINE L2 -180 3092 2813 2374 97 0 0 chr17 83753541 83753852 -5750701 - AluSx SINE Alu -1 311 1 323 151 34 55 chr17 83755479 83755625 -5748928 + CT-rich Low_complexity Low_complexity 4 146 0 383 258 0 47 chr17 83755645 83755773 -5748780 + L3 LINE CR1 1400 1521 -56 2047 106 0 0 chr17 83757698 83757973 -5746580 + AluSx SINE Alu 1 275 -37 258 41 41 20 chr17 83757979 83758028 -5746525 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1909 151 110 37 chr17 83758028 83758465 -5746088 + L1MB3 LINE L1 5663 6140 -43 2331 97 0 0 chr17 83758465 83758776 -5745777 - AluSx SINE Alu -1 311 1 1909 151 110 37 chr17 83758776 83758821 -5745732 + L1MB3 LINE L1 6140 6180 -3 933 226 22 85 chr17 83758885 83759124 -5745429 - MER63B DNA MER1_type -722 340 130 1930 135 34 0 chr17 83759124 83759420 -5745133 + AluSx SINE Alu 1 306 -6 933 226 22 85 chr17 83759420 83759543 -5745010 - MER63B DNA MER1_type -932 130 1 387 280 72 0 chr17 83759595 83759720 -5744833 - L2 LINE L2 -811 2503 2370 1057 271 86 3 chr17 83760293 83760665 -5743888 - MLT1C LTR MaLR -6 461 59 734 299 63 30 chr17 83761026 83761327 -5743226 + L3b LINE CR1 1149 1459 -124 39 50 0 0 chr17 83763430 83763490 -5741063 + GC_rich Low_complexity Low_complexity 1 60 0 33 56 0 0 chr17 83763562 83763616 -5740937 + GC_rich Low_complexity Low_complexity 1 54 0 28 29 0 0 chr17 83763863 83763898 -5740655 + GC_rich Low_complexity Low_complexity 1 35 0 232 309 118 13 chr17 83768482 83768634 -5735919 + MIR SINE MIR 65 232 -30 300 270 0 0 chr17 83770419 83770508 -5734045 + C-rich Low_complexity Low_complexity 1 89 0 219 290 58 0 chr17 83772052 83772121 -5732432 - L2 LINE L2 0 3272 3200 2345 92 0 3 chr17 83772247 83772561 -5731992 - AluSq SINE Alu 0 313 1 447 137 0 0 chr17 83773360 83773433 -5731120 + (TCCC)n Simple_repeat Simple_repeat 3 75 0 318 298 10 29 chr17 83773531 83773635 -5730918 - MIR SINE MIR -4 258 157 302 275 64 0 chr17 83774036 83774145 -5730408 + MIR SINE MIR 39 154 -108 217 284 45 45 chr17 83774213 83774301 -5730252 - L2 LINE L2 -21 3292 3205 268 314 19 33 chr17 83774801 83774946 -5729607 + MER5A DNA MER1_type 34 176 -2 414 0 0 0 chr17 83775075 83775121 -5729432 + (CA)n Simple_repeat Simple_repeat 2 47 0 339 232 137 0 chr17 83775171 83775266 -5729287 + L1ME4a LINE L1 6013 6120 -1 716 122 0 0 chr17 83775295 83775393 -5729160 + FLAM_C SINE Alu 14 111 -32 844 124 55 7 chr17 83775397 83775542 -5729011 - AluSq SINE Alu -11 302 151 922 120 0 0 chr17 83775624 83775749 -5728804 - AluSq/x SINE Alu -187 125 1 192 77 0 0 chr17 83775766 83775792 -5728761 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 306 255 104 0 chr17 83776186 83776292 -5728261 - MIR3 SINE MIR -3 205 89 1016 185 106 170 chr17 83777322 83777727 -5726826 - MLT1C LTR MaLR -6 389 6 252 0 0 0 chr17 83779036 83779064 -5725489 + (T)n Simple_repeat Simple_repeat 1 28 0 368 360 85 18 chr17 83779797 83780069 -5724484 - L3b LINE CR1 -6 1577 1288 1157 71 0 0 chr17 83780442 83780596 -5723957 + AluY SINE Alu 148 301 -10 2585 24 0 0 chr17 83780682 83780980 -5723573 - AluY SINE Alu -13 298 1 321 269 59 0 chr17 83781071 83781190 -5723363 + MER94 DNA DNA 1 126 -8 842 222 29 71 chr17 83781579 83781890 -5722663 - MLT1C LTR MaLR -169 298 1 489 288 116 24 chr17 83783294 83783544 -5721009 - LTR16C LTR ERVL -5 486 214 2169 88 14 0 chr17 83783805 83784115 -5720438 - AluSp SINE Alu 0 314 1 789 150 15 15 chr17 83785310 83785443 -5719110 - FLAM_C SINE Alu 0 133 1 2353 66 7 7 chr17 83785475 83785780 -5718773 + AluY SINE Alu 1 305 -6 468 225 118 1 chr17 83786085 83786229 -5718324 - L1ME LINE L1 -383 5738 5591 1114 254 68 36 chr17 83787324 83787765 -5716788 - MLT1C LTR MaLR -6 461 7 2065 103 0 40 chr17 83787889 83788190 -5716363 - AluSx SINE Alu -22 290 2 1941 155 0 3 chr17 83788200 83788504 -5716049 - AluJo SINE Alu -9 303 1 199 333 0 0 chr17 83789807 83789870 -5714683 + MIR SINE MIR 111 173 -89 1405 138 18 0 chr17 83790198 83790423 -5714130 - AluSg/x SINE Alu -1 309 81 481 245 54 20 chr17 83790423 83790570 -5713983 + Charlie8 DNA MER1_type 57 208 -2209 240 351 60 22 chr17 83791302 83791436 -5713117 + MIR SINE MIR 35 173 -89 1975 92 89 0 chr17 83791693 83791974 -5712579 + AluSx SINE Alu 1 306 -6 2191 198 20 26 chr17 83793986 83794441 -5710112 - L1MB3 LINE L1 -2 6181 5730 1835 158 0 10 chr17 83794464 83794767 -5709786 - AluJb SINE Alu -2 310 11 2096 96 25 38 chr17 83796885 83797199 -5707354 - AluSg SINE Alu 0 310 1 1938 152 3 7 chr17 83797230 83797539 -5707014 + AluJb SINE Alu 1 308 -4 245 309 48 0 chr17 83798378 83798462 -5706091 + MIR SINE MIR 59 146 -62 1051 113 6 6 chr17 83801174 83801333 -5703220 + AluSg/x SINE Alu 140 298 -14 1859 114 35 54 chr17 83801617 83801933 -5702620 - AluSq SINE Alu -3 310 1 630 206 0 56 chr17 83802203 83802383 -5702170 + AluSq SINE Alu 5 174 -139 228 67 0 0 chr17 83803916 83803946 -5700607 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2295 61 0 0 chr17 83804052 83804366 -5700187 + AluY SINE Alu 1 314 0 704 249 67 19 chr17 83804552 83804761 -5699792 - MIR SINE MIR -5 257 39 195 332 115 53 chr17 83804859 83805467 -5699086 - L2 LINE L2 -723 2591 1946 593 234 0 11 chr17 83805815 83805990 -5698563 + (CCCA)n Simple_repeat Simple_repeat 4 176 0 768 235 1 0 chr17 83805994 83806808 -5697745 + (TCCA)n Simple_repeat Simple_repeat 1 815 0 768 105 0 0 chr17 83809463 83809568 -5694985 - FLAM_C SINE Alu -5 138 34 195 162 0 0 chr17 83809890 83809927 -5694626 + L2 LINE L2 3277 3313 0 692 263 19 24 chr17 83810758 83810953 -5693600 + MIR SINE MIR 33 228 -34 870 139 0 8 chr17 83810953 83811082 -5693471 + FLAM_C SINE Alu 1 128 -5 689 200 12 36 chr17 83812988 83813153 -5691400 - L1PA7 LINE L1 -3 6151 5991 217 159 32 32 chr17 83813154 83813217 -5691336 + CT-rich Low_complexity Low_complexity 4 66 0 1235 276 88 0 chr17 83813228 83813627 -5690926 - L1MB5 LINE L1 -8 6166 5733 227 313 25 0 chr17 83813873 83813953 -5690600 + MER94 DNA DNA 1 82 -52 303 186 0 0 chr17 83813953 83814012 -5690541 + L1M3 LINE L1 5649 5707 -473 260 290 80 0 chr17 83814155 83814255 -5690298 + MIR3 SINE MIR 52 159 -49 398 246 127 0 chr17 83814258 83814376 -5690177 - MER3 DNA MER1_type 0 209 77 2186 210 39 23 chr17 83814376 83814593 -5689960 + L1MB2 LINE L1 5572 5784 -387 2285 74 14 3 chr17 83814593 83814889 -5689664 + AluSp SINE Alu 1 299 -14 2186 210 39 23 chr17 83814889 83815233 -5689320 + L1MB2 LINE L1 5784 6142 -29 247 200 14 114 chr17 83818076 83818146 -5686407 + MIR SINE MIR 90 152 -110 188 336 208 0 chr17 83818989 83819138 -5685415 - MIR SINE MIR -70 192 13 263 258 25 92 chr17 83820032 83820152 -5684401 + MIR SINE MIR 34 145 -63 767 156 22 21 chr17 83820235 83820518 -5684035 + (ATGGTG)n Simple_repeat Simple_repeat 1 283 0 951 161 0 0 chr17 83820525 83820705 -5683848 + (TGG)n Simple_repeat Simple_repeat 1 180 0 774 175 0 0 chr17 83820722 83820899 -5683654 + (TGG)n Simple_repeat Simple_repeat 3 179 0 947 129 5 114 chr17 83821853 83822063 -5682490 + AluSg/x SINE Alu 120 306 -6 912 207 64 24 chr17 83822078 83822329 -5682224 + MER33 DNA MER1_type 1 261 -63 195 42 0 0 chr17 83822336 83822360 -5682193 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2059 115 0 0 chr17 83822366 83822645 -5681908 - AluSx SINE Alu -33 279 1 228 328 103 17 chr17 83823445 83823561 -5680992 - MIR SINE MIR -63 145 20 2207 97 10 7 chr17 83826885 83827184 -5677369 + AluSq SINE Alu 1 300 -13 209 284 114 11 chr17 83830613 83830701 -5673852 + MIR SINE MIR 28 124 -138 21 0 0 0 chr17 83831449 83831470 -5673083 + AT_rich Low_complexity Low_complexity 1 21 0 321 365 44 11 chr17 83832043 83832224 -5672329 + MIR SINE MIR 66 252 -10 1827 151 164 16 chr17 83833081 83833273 -5671280 - MSTB LTR MaLR 0 426 264 1726 102 121 11 chr17 83833273 83833537 -5671016 - AluSg SINE Alu -17 293 1 1827 151 164 16 chr17 83833537 83833715 -5670838 - MSTB LTR MaLR -162 264 1 2264 109 0 3 chr17 83834584 83834897 -5669656 + AluSx SINE Alu 1 312 0 436 223 11 0 chr17 83835135 83835229 -5669324 - L1MB7 LINE L1 -3 6181 6087 760 254 33 78 chr17 83835232 83835591 -5668962 - MLT2B1 LTR ERVL 0 520 178 501 215 70 25 chr17 83835635 83835793 -5668760 - MER34 LTR ERV1 -7 535 371 709 96 0 39 chr17 83835802 83835906 -5668647 - AluJb SINE Alu -15 297 198 1361 108 5 0 chr17 83835960 83836145 -5668408 - AluJo SINE Alu -126 186 1 1824 144 34 0 chr17 83836211 83836503 -5668050 - AluSx SINE Alu -10 302 1 548 277 40 48 chr17 83836515 83836837 -5667716 - MER34 LTR ERV1 -174 533 6 293 236 28 0 chr17 83836841 83836913 -5667640 - MLT2B1 LTR ERVL -279 185 112 1338 120 0 0 chr17 83836913 83837122 -5667431 + MER75 DNA T2_type 1 209 -305 526 154 0 0 chr17 83837122 83837200 -5667353 + AluS SINE Alu 1 78 -235 477 0 0 0 chr17 83838661 83838714 -5665839 + (TG)n Simple_repeat Simple_repeat 1 53 0 1913 185 37 25 chr17 83839417 83839854 -5664699 + L1MB7 LINE L1 5647 6088 -96 495 159 8 87 chr17 83839854 83839877 -5664676 + MLT2B1 LTR ERVL 1 24 -496 2313 41 41 17 chr17 83839877 83840168 -5664385 + AluY SINE Alu 1 298 -13 495 159 8 87 chr17 83840168 83840270 -5664283 + MLT2B1 LTR ERVL 24 116 -404 1649 97 65 42 chr17 83840270 83840392 -5664161 - MER75 DNA T2_type 0 514 396 2045 121 6 13 chr17 83840392 83840706 -5663847 + AluSx SINE Alu 1 312 0 1649 97 65 42 chr17 83840706 83840893 -5663660 - MER75 DNA T2_type -118 396 198 1414 144 0 17 chr17 83840894 83841130 -5663423 - AluSg/x SINE Alu 0 312 81 388 204 11 0 chr17 83842689 83842777 -5661776 + HY1 scRNA scRNA 3 91 -21 2136 111 0 3 chr17 83842777 83843074 -5661479 - AluSg SINE Alu -14 296 1 195 42 0 0 chr17 83843084 83843108 -5661445 + (A)n Simple_repeat Simple_repeat 1 24 0 2297 111 0 0 chr17 83843167 83843473 -5661080 + AluSx SINE Alu 1 306 -6 2164 115 0 16 chr17 83844087 83844400 -5660153 + AluSx SINE Alu 1 308 -4 251 372 113 30 chr17 83845251 83845579 -5658974 - L2 LINE L2 -1317 1997 1643 219 191 48 0 chr17 83846084 83846126 -5658427 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 947 194 220 53 chr17 83846671 83846937 -5657616 - MLT1D LTR MaLR -3 502 153 2142 107 35 0 chr17 83846937 83847227 -5657326 - AluSx SINE Alu -12 300 1 947 194 220 53 chr17 83847227 83847337 -5657216 - MLT1D LTR MaLR -352 153 63 942 173 101 0 chr17 83847482 83847690 -5656863 - L1MB5 LINE L1 0 6174 5946 2260 102 0 0 chr17 83848197 83848501 -5656052 - AluSx SINE Alu -8 304 1 450 349 42 13 chr17 83849374 83849612 -5654941 + MIR SINE MIR 4 248 -14 1747 126 93 4 chr17 83850652 83850930 -5653623 - AluSx SINE Alu -9 303 1 1699 150 45 7 chr17 83850932 83851218 -5653335 - AluJo SINE Alu -15 297 1 374 112 34 11 chr17 83851302 83851391 -5653162 + (TG)n Simple_repeat Simple_repeat 1 91 0 224 561 0 0 chr17 83852369 83852435 -5652118 + C-rich Low_complexity Low_complexity 1 66 0 607 170 29 16 chr17 83852953 83853306 -5651247 + (ATGGTG)n Simple_repeat Simple_repeat 1 357 0 274 137 14 41 chr17 83853335 83853408 -5651145 + (ATGGTG)n Simple_repeat Simple_repeat 5 75 0 1696 137 93 4 chr17 83853687 83853965 -5650588 - AluSx SINE Alu -9 303 1 1711 143 45 7 chr17 83853967 83854253 -5650300 - AluJo SINE Alu -15 297 1 323 158 32 11 chr17 83854337 83854432 -5650121 + (TG)n Simple_repeat Simple_repeat 1 97 0 187 106 82 12 chr17 83854464 83854549 -5650004 + (TG)n Simple_repeat Simple_repeat 2 92 0 464 288 75 12 chr17 83854690 83854850 -5649703 - MIR SINE MIR -59 203 34 1710 146 69 0 chr17 83859073 83859347 -5645206 - AluJb SINE Alu -19 293 1 2266 71 30 7 chr17 83859380 83859677 -5644876 + AluSx SINE Alu 1 304 -8 222 265 41 51 chr17 83859793 83859891 -5644662 - MER5B DNA MER1_type -17 161 65 283 278 19 56 chr17 83861156 83861264 -5643289 + MIR SINE MIR 18 121 -87 788 229 73 94 chr17 83861346 83861611 -5642942 - MLT1C LTR MaLR -4 463 211 2165 108 3 16 chr17 83861611 83861926 -5642627 - AluSx SINE Alu -1 311 1 788 229 73 94 chr17 83861926 83862128 -5642425 - MLT1C LTR MaLR -256 211 6 219 240 0 20 chr17 83862305 83862355 -5642198 + MIR SINE MIR 96 144 -118 449 192 91 0 chr17 83863364 83863463 -5641090 - MIR SINE MIR -65 197 90 217 235 51 61 chr17 83863763 83863861 -5640692 + MIR SINE MIR 33 129 -133 2198 113 10 0 chr17 83863866 83864175 -5640378 - AluSq SINE Alu 0 313 2 2272 96 0 3 chr17 83868981 83869282 -5635271 + AluSg SINE Alu 1 300 -10 1867 146 45 0 chr17 83869573 83869861 -5634692 - AluJb SINE Alu -11 301 1 533 219 55 135 chr17 83870105 83870484 -5634069 - MLT1C LTR MaLR 0 467 42 234 271 144 17 chr17 83870563 83870681 -5633872 + MIR3 SINE MIR 4 136 -72 537 236 18 0 chr17 83871310 83871420 -5633133 + MER81 DNA DNA 2 113 -1 2347 103 0 0 chr17 83871906 83872218 -5632335 - AluSx SINE Alu 0 312 1 251 143 0 18 chr17 83872677 83872733 -5631820 + (TCCCC)n Simple_repeat Simple_repeat 3 57 0 276 200 0 0 chr17 83873170 83873230 -5631323 - L1ME4a LINE L1 -2 6119 6060 22 35 0 0 chr17 83873375 83873404 -5631149 + AT_rich Low_complexity Low_complexity 1 29 0 1649 156 0 35 chr17 83873899 83874060 -5630493 - AluJo SINE Alu -33 279 131 2109 102 3 41 chr17 83874060 83874375 -5630178 + AluSq SINE Alu 1 303 -10 1649 156 0 35 chr17 83874375 83874502 -5630051 - AluJo SINE Alu -181 131 1 893 141 20 0 chr17 83875856 83876005 -5628548 + FRAM SINE Alu 1 144 -32 183 303 180 0 chr17 83876323 83876412 -5628141 - MIR SINE MIR -62 146 42 901 245 43 10 chr17 83877135 83877343 -5627210 + MIR SINE MIR 48 262 0 830 205 8 0 chr17 83877363 83877905 -5626648 + (CAT)n Simple_repeat Simple_repeat 1 546 0 507 229 6 22 chr17 83877863 83878046 -5626507 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 750 182 0 0 chr17 83878062 83878221 -5626332 + (CAT)n Simple_repeat Simple_repeat 3 161 0 333 241 0 0 chr17 83878268 83878380 -5626173 + (CAT)n Simple_repeat Simple_repeat 1 112 0 389 319 157 6 chr17 83878594 83878760 -5625793 - MIR SINE MIR -70 192 2 221 233 33 156 chr17 83878911 83879091 -5625462 - L2 LINE L2 -46 3226 3069 2455 58 0 0 chr17 83879163 83879457 -5625096 - AluY SINE Alu -17 294 1 404 235 61 9 chr17 83880136 83880251 -5624302 + MIR SINE MIR 20 140 -122 667 236 40 0 chr17 83880856 83881004 -5623549 + MIR SINE MIR 87 240 -22 528 358 68 28 chr17 83881617 83881972 -5622581 - L3 LINE CR1 -75 1502 1134 1549 191 58 97 chr17 83882032 83882209 -5622344 + MLT1C LTR MaLR 4 186 -281 1574 163 62 7 chr17 83882209 83882497 -5622056 + AluJb SINE Alu 1 304 -8 1549 191 58 97 chr17 83882497 83882734 -5621819 + MLT1C LTR MaLR 186 399 -68 2372 72 0 31 chr17 83882734 83883054 -5621499 - AluY SINE Alu -1 310 1 1549 191 58 97 chr17 83883054 83883121 -5621432 + MLT1C LTR MaLR 399 467 0 320 0 25 0 chr17 83883899 83883939 -5620614 + (TG)n Simple_repeat Simple_repeat 1 41 0 235 240 13 20 chr17 83884072 83884222 -5620331 + (CA)n Simple_repeat Simple_repeat 1 149 0 234 0 0 0 chr17 83884523 83884549 -5620004 + (CA)n Simple_repeat Simple_repeat 2 27 0 400 271 37 65 chr17 83885317 83885531 -5619022 + L1ME LINE L1 145 352 -5853 2102 283 39 25 chr17 83885539 83885743 -5618810 + L1ME LINE L1 1431 1631 -4584 1936 127 6 67 chr17 83885743 83886074 -5618479 + AluSx SINE Alu 1 311 -1 2102 283 39 25 chr17 83886074 83886560 -5617993 + L1ME LINE L1 1631 2105 -4110 2322 100 0 3 chr17 83886560 83886871 -5617682 + AluSx SINE Alu 1 310 -2 2102 283 39 25 chr17 83886871 83887138 -5617415 + L1ME LINE L1 2105 2367 -3848 1874 151 8 11 chr17 83887139 83887491 -5617062 - MER47A DNA MER2_type -2 364 14 1646 224 75 67 chr17 83887540 83887764 -5616789 + L1ME LINE L1 2386 2607 -3608 2429 74 0 0 chr17 83887764 83888062 -5616491 - AluSq SINE Alu -13 300 3 1646 224 75 67 chr17 83888062 83888089 -5616464 + L1ME LINE L1 2607 2632 -3583 1431 211 160 3 chr17 83888089 83888402 -5616151 - MLT1A1 LTR MaLR -3 362 1 1646 224 75 67 chr17 83888402 83888914 -5615639 + L1ME LINE L1 2632 3156 -3059 1938 90 34 8 chr17 83888916 83889182 -5615371 + AluSx SINE Alu 1 273 -39 364 0 59 0 chr17 83889190 83889241 -5615312 + (CAAAA)n Simple_repeat Simple_repeat 1 54 0 407 276 5 73 chr17 83889254 83889446 -5615107 + LTR41 LTR ERVL 1 179 -594 4435 172 48 10 chr17 83889829 83890163 -5614390 - L1MB3 LINE L1 -15 6168 5848 2328 94 7 0 chr17 83890163 83890470 -5614083 - AluSx SINE Alu -3 309 1 4435 172 48 10 chr17 83890470 83891234 -5613319 - L1MB3 LINE L1 -335 5848 5038 248 184 0 0 chr17 83891234 83891283 -5613270 + LTR41 LTR ERVL 620 668 -105 2964 233 31 41 chr17 83891293 83892116 -5612437 - MER21B LTR ERV1 -11 852 23 438 69 0 0 chr17 83892116 83892174 -5612379 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1732 163 3 7 chr17 83892180 83892468 -5612085 - AluJb SINE Alu -25 287 1 2964 233 31 41 chr17 83892468 83892497 -5612056 - MER21B LTR ERV1 -845 18 1 325 208 10 50 chr17 83892515 83892616 -5611937 + LTR41 LTR ERVL 671 767 -6 401 284 70 65 chr17 83892636 83892837 -5611716 + L1ME LINE L1 3208 3409 -2806 14443 120 30 23 chr17 83892849 83893054 -5611499 + Tigger1 DNA MER2_type 22 224 -2194 2513 53 26 3 chr17 83893054 83893358 -5611195 - AluY SINE Alu -2 309 1 2388 75 0 33 chr17 83893359 83893664 -5610889 - AluSx SINE Alu -15 297 3 14443 120 30 23 chr17 83893664 83894718 -5609835 + Tigger1 DNA MER2_type 224 1269 -1149 2338 103 0 13 chr17 83894718 83895029 -5609524 + AluSx SINE Alu 1 307 -5 2199 130 0 16 chr17 83895030 83895346 -5609207 + AluSx SINE Alu 1 311 -1 2172 132 7 0 chr17 83895349 83895644 -5608909 + AluSx SINE Alu 1 297 -15 14443 120 30 23 chr17 83895644 83896440 -5608113 + Tigger1 DNA MER2_type 1270 2059 -359 2568 87 0 0 chr17 83896440 83896752 -5607801 + AluSx SINE Alu 1 312 0 14443 120 30 23 chr17 83896752 83896945 -5607608 + Tigger1 DNA MER2_type 2059 2301 -117 2185 138 3 0 chr17 83896945 83897243 -5607310 - AluSx SINE Alu -13 299 1 14443 120 30 23 chr17 83897243 83897339 -5607214 + Tigger1 DNA MER2_type 2301 2395 -23 3471 221 94 55 chr17 83897351 83897855 -5606698 + L1ME LINE L1 3418 3901 -2314 1810 155 10 36 chr17 83897855 83898159 -5606394 + AluJo SINE Alu 7 302 -10 3471 221 94 55 chr17 83898159 83899097 -5605456 + L1ME LINE L1 3901 4917 -1298 284 249 5 63 chr17 83899146 83899335 -5605218 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 303 253 0 63 chr17 83899377 83899567 -5604986 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 2390 96 0 3 chr17 83902297 83902599 -5601954 + AluSg SINE Alu 1 301 -9 1919 145 45 3 chr17 83902890 83903179 -5601374 - AluJb SINE Alu -11 301 1 562 216 55 135 chr17 83903423 83903802 -5600751 - MLT1C LTR MaLR 0 467 42 210 238 168 20 chr17 83903881 83903982 -5600571 + MIR3 SINE MIR 4 119 -89 230 108 0 0 chr17 83904177 83904214 -5600339 + MLT1D LTR MaLR 81 117 -388 494 236 18 0 chr17 83904629 83904739 -5599814 + MER81 DNA DNA 2 113 -1 2456 103 0 0 chr17 83905225 83905537 -5599016 - AluSx SINE Alu 0 312 1 251 143 0 18 chr17 83905996 83906052 -5598501 + (TCCCC)n Simple_repeat Simple_repeat 3 57 0 283 200 0 0 chr17 83906489 83906549 -5598004 - L1ME4a LINE L1 -2 6119 6060 22 35 0 0 chr17 83906694 83906723 -5597830 + AT_rich Low_complexity Low_complexity 1 29 0 1623 148 0 82 chr17 83907218 83907394 -5597159 - AluJo SINE Alu -33 279 137 2198 105 3 41 chr17 83907394 83907709 -5596844 + AluSq SINE Alu 1 303 -10 1623 148 0 82 chr17 83907709 83907836 -5596717 - AluJo SINE Alu -175 137 1 926 141 20 0 chr17 83909191 83909340 -5595213 + FRAM SINE Alu 1 144 -32 895 245 43 10 chr17 83910472 83910680 -5593873 + MIR SINE MIR 48 262 0 776 209 8 0 chr17 83910700 83911221 -5593332 + (CAT)n Simple_repeat Simple_repeat 1 525 0 528 224 6 22 chr17 83911179 83911362 -5593191 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 750 182 0 0 chr17 83911378 83911537 -5593016 + (CAT)n Simple_repeat Simple_repeat 3 161 0 333 241 0 0 chr17 83911584 83911696 -5592857 + (CAT)n Simple_repeat Simple_repeat 1 112 0 326 298 157 0 chr17 83911910 83912031 -5592522 - MIR SINE MIR -70 192 53 188 228 33 156 chr17 83912227 83912407 -5592146 - L2 LINE L2 -46 3226 3069 333 172 0 103 chr17 83912434 83912479 -5592074 + MSTA LTR MaLR 351 384 -44 2209 97 17 3 chr17 83912479 83912768 -5591785 - AluSg SINE Alu -17 293 1 333 172 0 103 chr17 83912768 83912809 -5591744 + MSTA LTR MaLR 384 428 0 1059 261 45 50 chr17 83912816 83913580 -5590973 - L1MCc LINE L1 -4887 1536 1129 228 317 66 97 chr17 83914678 83914905 -5589648 - L2 LINE L2 -20 3252 3033 1266 238 92 22 chr17 83914967 83915233 -5589320 + L1ME2 LINE L1 5674 5987 -177 2154 136 0 19 chr17 83915233 83915590 -5588963 + AluSx SINE Alu 1 312 0 1266 238 92 22 chr17 83915590 83915781 -5588772 + L1ME2 LINE L1 5987 6163 -1 300 292 15 80 chr17 83915815 83915952 -5588601 - L1ME LINE L1 -3961 2998 2871 2098 126 49 6 chr17 83916333 83916682 -5587871 - THE1B LTR MaLR 0 364 1 2317 119 3 0 chr17 83917277 83917589 -5586964 + AluSp SINE Alu 1 313 0 2205 195 91 24 chr17 83917735 83917796 -5586757 - MLT1F LTR MaLR 0 542 487 4905 118 0 3 chr17 83917796 83918536 -5586017 - L1PA14 LINE L1 0 6161 5424 2205 195 91 24 chr17 83918536 83918982 -5585571 - MLT1F LTR MaLR -55 487 1 21 0 0 0 chr17 83919035 83919056 -5585497 + AT_rich Low_complexity Low_complexity 1 21 0 1079 181 20 57 chr17 83919354 83919652 -5584901 - L1MA7 LINE L1 -4 6287 6001 1856 163 19 7 chr17 83919803 83920110 -5584443 - AluJb SINE Alu -1 311 1 819 175 0 31 chr17 83920137 83920349 -5584204 - L1ME LINE L1 -5291 1656 1454 2030 154 3 10 chr17 83920349 83920655 -5583898 - AluSq SINE Alu -9 304 1 819 175 0 31 chr17 83920655 83920850 -5583703 - L1ME LINE L1 -5493 1454 1254 2457 84 0 7 chr17 83921071 83921381 -5583172 - AluSg SINE Alu -2 308 1 225 351 76 32 chr17 83921478 83921663 -5582890 - L1ME LINE L1 -6657 202 10 241 309 103 58 chr17 83921667 83921890 -5582663 + L1M4 LINE L1 3867 4099 -2047 2028 145 7 3 chr17 83921912 83922208 -5582345 - AluSx SINE Alu -15 297 1 903 181 220 141 chr17 83922349 83922930 -5581623 + LTR27 LTR ERV1 8 634 -2 582 267 4 20 chr17 83922960 83923140 -5581413 - MLT2B1 LTR ERVL -96 458 265 3564 82 45 74 chr17 83923310 83923443 -5581110 + MER4A LTR ERV1 1 136 -464 2555 56 0 3 chr17 83923443 83923746 -5580807 + AluY SINE Alu 1 302 -9 3564 82 45 74 chr17 83923746 83924040 -5580513 + MER4A LTR ERV1 136 437 -163 1164 114 0 0 chr17 83924040 83924216 -5580337 + (TA)n Simple_repeat Simple_repeat 1 176 0 2444 68 3 3 chr17 83924219 83924515 -5580038 - AluY SINE Alu -15 296 1 3564 82 45 74 chr17 83924515 83924700 -5579853 + MER4A LTR ERV1 439 600 0 2378 113 0 0 chr17 83924879 83925190 -5579363 - AluSx SINE Alu -1 311 1 1296 246 82 56 chr17 83925328 83925722 -5578831 - MLT2B3 LTR ERVL -41 513 102 1920 147 0 14 chr17 83925722 83926015 -5578538 + AluJb SINE Alu 1 289 -23 1296 246 82 56 chr17 83926015 83926120 -5578433 - MLT2B3 LTR ERVL -452 102 1 4109 130 85 55 chr17 83926796 83928221 -5576332 - pTR5 LTR ERV1 0 2606 1524 207 150 50 0 chr17 83929998 83930041 -5574512 + C-rich Low_complexity Low_complexity 1 45 0 409 150 0 168 chr17 83931435 83931491 -5573062 + MLT1B LTR MaLR 1 30 -360 2141 130 0 6 chr17 83931491 83931806 -5572747 + AluSq SINE Alu 1 313 0 409 150 0 168 chr17 83931806 83931862 -5572691 + MLT1B LTR MaLR 30 94 -296 2417 111 3 6 chr17 83931881 83932232 -5572321 - MER1A DNA MER1_type -3 526 177 391 121 0 0 chr17 83932231 83932289 -5572264 - MER1A DNA MER1_type -469 58 1 * 659 208 26 13 chr17 83932290 83932444 -5572109 + MLT1B LTR MaLR 235 390 0 297 159 48 0 chr17 83934272 83934335 -5570218 - MIR SINE MIR -110 152 87 1857 157 25 4 chr17 83934617 83934898 -5569655 - AluSx SINE Alu -25 287 1 2143 108 0 3 chr17 83935164 83935451 -5569102 - AluSx SINE Alu -2 310 25 841 92 0 99 chr17 83935452 83935594 -5568959 + AluSp/q SINE Alu 175 302 -11 2102 106 74 18 chr17 83935763 83936102 -5568451 + THE1B LTR MaLR 1 358 -6 274 205 80 108 chr17 83936363 83936524 -5568029 - MER5A DNA MER1_type -17 165 3 2636 71 0 0 chr17 83936721 83937032 -5567521 - AluY SINE Alu 0 311 1 1484 209 128 2 chr17 83937893 83938329 -5566224 + Charlie4a DNA MER1_type 18 508 0 2169 110 10 14 chr17 83938440 83938750 -5565803 - AluSx SINE Alu 0 309 1 202 265 15 15 chr17 83938814 83938882 -5565671 + MIR SINE MIR 135 202 -60 * 540 216 48 8 chr17 83938872 83938997 -5565556 - MIR SINE MIR -87 175 46 266 113 0 38 chr17 83939395 83939448 -5565105 + (TCC)n Simple_repeat Simple_repeat 1 51 0 2372 95 3 0 chr17 83939448 83939752 -5564801 - AluSx SINE Alu -7 305 1 1961 278 38 29 chr17 83940165 83940731 -5563822 - L1MEc LINE L1 -3334 2881 2322 2571 78 0 0 chr17 83940731 83941040 -5563513 + AluY SINE Alu 1 309 -2 1961 278 38 29 chr17 83941040 83941200 -5563353 - L1MEc LINE L1 -3893 2322 2173 182 37 37 0 chr17 83941200 83941227 -5563326 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1961 278 38 29 chr17 83941227 83941357 -5563196 - L1MEc LINE L1 -4042 2173 2046 315 198 81 35 chr17 83941363 83941449 -5563104 + MER21B LTR ERV1 1 90 -773 1663 151 29 18 chr17 83941539 83941817 -5562736 - AluJb SINE Alu -31 281 1 190 296 37 0 chr17 83941858 83941939 -5562614 + L2 LINE L2 2722 2805 -509 305 290 97 66 chr17 83942823 83943082 -5561471 + L2 LINE L2 3006 3272 0 2373 91 3 0 chr17 83943228 83943526 -5561027 + AluSx SINE Alu 1 299 -13 21 36 0 0 chr17 83943630 83943658 -5560895 + AT_rich Low_complexity Low_complexity 1 28 0 468 321 47 5 chr17 83945406 83945599 -5558954 - MIR3 SINE MIR -5 203 3 406 309 7 0 chr17 83947107 83947246 -5557307 - MER103 DNA DNA -19 147 8 1981 223 28 22 chr17 83947286 83947788 -5556765 + MLT1D LTR MaLR 1 505 0 2093 118 7 3 chr17 83948015 83948312 -5556241 - AluSx SINE Alu -14 298 1 2417 63 0 13 chr17 83949024 83949324 -5555229 - AluY SINE Alu -15 296 1 1353 130 0 0 chr17 83949327 83949512 -5555041 - AluJo SINE Alu -19 293 109 1485 49 0 22 chr17 83949512 83949697 -5554856 - AluY SINE Alu -130 181 1 264 292 14 0 chr17 83950537 83950609 -5553944 - MER5B DNA MER1_type -101 77 5 335 320 24 16 chr17 83950691 83950816 -5553737 + MIR SINE MIR 18 143 -119 2533 70 3 0 chr17 83951977 83952275 -5552278 - AluSq SINE Alu -14 299 1 857 141 0 16 chr17 83952496 83952624 -5551929 - AluJo SINE Alu -186 126 1 244 339 18 30 chr17 83952675 83952692 -5551861 - L1MA10 LINE L1 0 6334 6318 1901 240 51 22 chr17 83952692 83953109 -5551444 - L1ME1 LINE L1 -8 6158 5675 2078 158 0 0 chr17 83953109 83953419 -5551134 - AluJo SINE Alu -2 310 1 1901 240 51 22 chr17 83953419 83953627 -5550926 - L1ME1 LINE L1 -491 5675 5474 2045 94 0 0 chr17 83953637 83953891 -5550662 + AluSx SINE Alu 1 254 -58 294 73 0 0 chr17 83954531 83954572 -5549981 + (TG)n Simple_repeat Simple_repeat 1 41 0 536 306 25 38 chr17 83954604 83954839 -5549714 - MLT1K LTR MaLR -237 351 120 1910 144 16 26 chr17 83954881 83955187 -5549366 + AluJb SINE Alu 1 303 -9 1766 74 0 14 chr17 83955778 83955995 -5548558 - AluY SINE Alu -15 296 83 2208 98 0 0 chr17 83956256 83956533 -5548020 + AluSx SINE Alu 35 311 -1 271 330 10 0 chr17 83956640 83956737 -5547816 + MIR SINE MIR 117 214 -48 180 0 0 0 chr17 83957606 83957626 -5546927 + (CA)n Simple_repeat Simple_repeat 2 21 0 344 246 36 99 chr17 83958202 83958454 -5546099 + LTR16A LTR ERVL 88 323 -127 404 52 83 21 chr17 83958739 83958835 -5545718 + CT-rich Low_complexity Low_complexity 1 102 0 2351 108 3 0 chr17 83958835 83959140 -5545413 - AluSx SINE Alu -6 306 1 1151 229 22 0 chr17 83959144 83959411 -5545142 - MER68 LTR ERV1 -285 277 5 216 0 0 0 chr17 83959612 83959636 -5544917 + (TGGGGG)n Simple_repeat Simple_repeat 2 25 0 192 250 39 0 chr17 83959997 83960049 -5544504 - MIR SINE MIR -188 74 21 216 158 0 0 chr17 83960360 83960398 -5544155 + (TAG)n Simple_repeat Simple_repeat 2 39 0 420 297 69 11 chr17 83960482 83960657 -5543896 - MIR SINE MIR -77 185 1 255 346 69 10 chr17 83961794 83961895 -5542658 + L2 LINE L2 3187 3293 -20 232 324 48 6 chr17 83964614 83964775 -5539778 - MER5A DNA MER1_type 0 178 7 208 215 266 25 chr17 83964782 83964861 -5539692 - MIR3 SINE MIR -49 159 62 871 205 34 24 chr17 83965158 83965363 -5539190 + MER63A DNA MER1_type 2 208 -2 2222 101 3 10 chr17 83966508 83966804 -5537749 + AluSq SINE Alu 1 294 -19 543 348 17 9 chr17 83967113 83967343 -5537210 + MIR SINE MIR 16 247 -15 2092 127 85 8 chr17 83967749 83968112 -5536441 - MSTA LTR MaLR -37 391 1 3097 191 41 77 chr17 83969255 83969507 -5535046 + L1MB5 LINE L1 5370 5630 -544 2130 138 0 0 chr17 83969507 83969798 -5534755 + AluJb SINE Alu 11 301 -11 3097 191 41 77 chr17 83969798 83969874 -5534679 + L1MB5 LINE L1 5630 5707 -467 2378 105 3 0 chr17 83969874 83970178 -5534375 - AluSp SINE Alu -2 311 7 3097 191 41 77 chr17 83970178 83970620 -5533933 + L1MB5 LINE L1 5707 6112 -62 1945 149 0 26 chr17 83970620 83970787 -5533766 - AluJb SINE Alu -12 300 143 2345 107 0 0 chr17 83970787 83971087 -5533466 - AluSx SINE Alu -12 300 1 1945 149 0 26 chr17 83971087 83971227 -5533326 - AluJb SINE Alu -169 143 1 3097 191 41 77 chr17 83971227 83971281 -5533272 + L1MB5 LINE L1 6112 6166 -8 208 83 0 56 chr17 83973003 83973039 -5531514 + (GGGGA)n Simple_repeat Simple_repeat 5 38 0 526 184 106 50 chr17 83974208 83974387 -5530166 + MER5A DNA MER1_type 1 189 0 198 254 0 56 chr17 83974425 83974496 -5530057 + L2 LINE L2 3206 3272 0 312 167 13 64 chr17 83975202 83975280 -5529273 - L1ME4a LINE L1 -2 6119 6046 460 214 107 14 chr17 83975350 83975490 -5529063 - L1ME4a LINE L1 -195 5926 5774 663 186 59 143 chr17 83976425 83976602 -5527951 - MER20 DNA MER1_type -2 217 63 2298 125 0 0 chr17 83976602 83976906 -5527647 - AluSx SINE Alu -8 304 1 663 186 59 143 chr17 83976906 83976965 -5527588 - MER20 DNA MER1_type -156 63 1 2380 78 3 3 chr17 83977542 83977836 -5526717 - AluSx SINE Alu -18 294 1 2458 101 0 0 chr17 83978549 83978857 -5525696 + AluSx SINE Alu 3 310 -2 1605 218 71 25 chr17 83979251 83979508 -5525045 - MLT1C LTR MaLR -6 461 174 315 0 0 0 chr17 83979508 83979543 -5525010 + (TG)n Simple_repeat Simple_repeat 2 36 0 1605 218 71 25 chr17 83979543 83979721 -5524832 - MLT1C LTR MaLR -293 174 6 1623 192 3 11 chr17 83979817 83980131 -5524422 - AluJb SINE Alu 0 312 1 2082 128 3 16 chr17 83980140 83980316 -5524237 - AluSx SINE Alu -3 309 137 2314 90 7 0 chr17 83980316 83980646 -5523907 - AluY SINE Alu 0 311 1 2082 128 3 16 chr17 83980646 83980782 -5523771 - AluSx SINE Alu -175 137 1 934 316 29 15 chr17 83980967 83981379 -5523174 + LTR16C LTR ERVL 64 481 -10 2308 123 0 0 chr17 83981762 83982072 -5522481 - AluSg SINE Alu 0 310 1 340 271 0 0 chr17 83982899 83982969 -5521584 + MER81 DNA DNA 1 70 -44 1526 162 20 86 chr17 83982995 83983337 -5521216 - AluJo SINE Alu 0 322 1 2409 111 3 0 chr17 83983924 83984231 -5520322 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 83984352 83984373 -5520180 + AT_rich Low_complexity Low_complexity 1 21 0 572 321 137 21 chr17 83984467 83984941 -5519612 - L1MC4a LINE L1 -1670 6138 5610 399 58 0 0 chr17 83985018 83985070 -5519483 + Alu SINE Alu 1 52 -256 2199 105 21 0 chr17 83985070 83985355 -5519198 + AluSx SINE Alu 21 311 -1 330 167 28 0 chr17 83985674 83985746 -5518807 - L1MD3 LINE L1 0 7995 7922 770 208 74 35 chr17 83985746 83985948 -5518605 + MER20 DNA MER1_type 4 213 -6 513 140 26 11 chr17 83985956 83986072 -5518481 - L1MD3 LINE L1 -77 7918 7719 946 218 68 0 chr17 83986072 83986278 -5518275 - MLT1A1 LTR MaLR 0 365 146 2340 82 0 0 chr17 83986278 83986589 -5517964 - AluSx SINE Alu 0 311 1 7769 177 16 10 chr17 83986599 83989065 -5515488 - L1PA16 LINE L1 -1 6165 3674 891 134 7 7 chr17 83989076 83989225 -5515328 - MLT1A1 LTR MaLR -216 149 1 4416 164 28 25 chr17 83989225 83989642 -5514911 - L1MB1 LINE L1 -36 6132 5718 2123 117 50 0 chr17 83989642 83989925 -5514628 - AluSx SINE Alu -15 297 1 4416 164 28 25 chr17 83989925 83990418 -5514135 - L1MB1 LINE L1 -450 5718 5219 1123 150 5 20 chr17 83990430 83990630 -5513923 + AluSq SINE Alu 11 207 -106 457 287 13 7 chr17 83991023 83991173 -5513380 - L1MB1 LINE L1 -250 5939 5789 2350 94 0 7 chr17 83991226 83991523 -5513030 - AluSx SINE Alu -4 308 14 746 156 56 0 chr17 83991559 83991738 -5512815 - L1MA8 LINE L1 0 6291 6103 3435 123 10 8 chr17 83991738 83992341 -5512212 - L1MB1 LINE L1 -480 5811 5208 2559 64 0 13 chr17 83992454 83992766 -5511787 - AluY SINE Alu -3 308 1 196 272 272 10 chr17 83993575 83993678 -5510875 + MER5A DNA MER1_type 44 173 -16 * 406 192 61 20 chr17 83993600 83993699 -5510854 - MER5A DNA MER1_type -80 109 7 231 250 0 0 chr17 83994056 83994108 -5510445 + G-rich Low_complexity Low_complexity 2 53 0 434 233 62 23 chr17 83996132 83996261 -5508292 + MER117 DNA MER1_type 3 136 -61 232 275 144 36 chr17 83996331 83996498 -5508055 - L1ME LINE L1 -331 5790 5606 310 257 50 50 chr17 83996977 83997117 -5507436 - MIR3 SINE MIR -1 207 68 2404 101 0 0 chr17 83997452 83997750 -5506803 - AluSq SINE Alu -15 298 1 2072 75 24 0 chr17 84000766 84001021 -5503532 - AluSc SINE Alu -11 298 38 252 0 0 0 chr17 84001021 84001049 -5503504 + (A)n Simple_repeat Simple_repeat 1 28 0 25 31 0 0 chr17 84001049 84001081 -5503472 + AT_rich Low_complexity Low_complexity 1 32 0 5254 227 41 67 chr17 84001386 84001490 -5503063 - L1ME LINE L1 -887 5259 5154 2166 150 0 0 chr17 84001490 84001797 -5502756 - AluSx SINE Alu -5 307 1 5254 227 41 67 chr17 84001797 84002126 -5502427 - L1ME LINE L1 -992 5154 4818 2141 118 0 0 chr17 84002126 84002405 -5502148 - AluSx SINE Alu -2 310 32 5254 227 41 67 chr17 84002405 84003072 -5501481 - L1ME LINE L1 -1328 4818 4135 2321 63 40 10 chr17 84003072 84003371 -5501182 - AluY SINE Alu -3 308 1 5254 227 41 67 chr17 84003371 84004239 -5500314 - L1ME LINE L1 -2011 4135 3340 2806 162 15 5 chr17 84004297 84004910 -5499643 - L1MB3 LINE L1 0 6183 5366 324 0 0 0 chr17 84004911 84004947 -5499606 + (TG)n Simple_repeat Simple_repeat 1 36 0 2032 263 52 8 chr17 84004950 84005668 -5498885 - L1ME LINE L1 -2794 3352 2604 227 316 13 0 chr17 84005671 84005747 -5498806 + L2 LINE L2 1884 1960 -1354 * 337 325 89 29 chr17 84005742 84006161 -5498392 + L2 LINE L2 2602 3058 -214 493 172 8 52 chr17 84006572 84006706 -5497847 - HsTC2 DNA Tc2 -101 1797 1670 383 281 75 50 chr17 84006842 84006888 -5497665 - L1M4 LINE L1 -1425 4721 4678 808 10 20 0 chr17 84006895 84006996 -5497557 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 1567 182 100 0 chr17 84006996 84007257 -5497296 - AluJo SINE Alu -21 291 1 383 281 75 50 chr17 84007257 84007370 -5497183 - L1M4 LINE L1 -1468 4678 4558 215 193 45 57 chr17 84007376 84007552 -5497001 + (TATAA)n Simple_repeat Simple_repeat 1 174 0 584 207 0 0 chr17 84007676 84007787 -5496766 - L1ME1 LINE L1 -6 6160 6050 2423 62 0 7 chr17 84008046 84008335 -5496218 - AluSg1 SINE Alu -22 287 1 2254 108 0 20 chr17 84008335 84008640 -5495913 - AluSx SINE Alu -12 300 1 2483 102 0 0 chr17 84009214 84009527 -5495026 - AluSq SINE Alu 0 313 1 763 209 7 0 chr17 84009702 84009855 -5494698 + MLT2B1 LTR ERVL 1 154 -366 1601 207 22 28 chr17 84009857 84010215 -5494338 + MLT1A1 LTR MaLR 10 365 0 303 109 43 0 chr17 84010215 84010260 -5494293 + MLT2B1 LTR ERVL 144 190 -274 1988 117 34 0 chr17 84010420 84010686 -5493867 + AluSx SINE Alu 1 275 -37 525 237 106 28 chr17 84010898 84011165 -5493388 - L1MC4a LINE L1 -161 5960 5670 2504 56 0 20 chr17 84011185 84011489 -5493064 + AluY SINE Alu 1 298 -13 443 269 23 8 chr17 84011502 84011632 -5492921 - MER104 DNA Tc2 -30 150 19 2405 84 0 3 chr17 84011860 84012156 -5492397 + AluSx SINE Alu 1 295 -17 1033 214 135 38 chr17 84012197 84012630 -5491923 - MLT1D LTR MaLR 0 467 1 242 288 48 24 chr17 84013626 84013751 -5490802 - MIR SINE MIR -115 147 20 1296 219 185 8 chr17 84014000 84014384 -5490169 - MLT1C LTR MaLR -8 459 8 215 266 136 25 chr17 84014405 84014663 -5489890 - L2 LINE L2 -233 3039 2751 182 114 0 29 chr17 84014757 84014792 -5489761 + (CCCCCT)n Simple_repeat Simple_repeat 2 35 0 2252 116 0 0 chr17 84015915 84016207 -5488346 + AluSx SINE Alu 1 292 -20 1811 195 3 3 chr17 84016755 84017089 -5487464 + MLT2C1 LTR ERVL 16 349 -48 227 157 20 0 chr17 84017143 84017194 -5487359 + CT-rich Low_complexity Low_complexity 1 52 0 297 0 0 0 chr17 84017196 84017229 -5487324 + (CTG)n Simple_repeat Simple_repeat 2 34 0 814 138 0 48 chr17 84017231 84017420 -5487133 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2104 103 7 0 chr17 84017447 84017720 -5486833 - AluSq SINE Alu -38 275 1 1399 169 49 21 chr17 84019004 84019247 -5485306 + AluJo SINE Alu 7 256 -56 1155 248 78 47 chr17 84019591 84019869 -5484684 - MLT1C LTR MaLR 0 467 168 2376 105 3 0 chr17 84019869 84020175 -5484378 - AluSq SINE Alu -2 311 5 1155 248 78 47 chr17 84020175 84020343 -5484210 - MLT1C LTR MaLR -299 168 7 201 288 56 56 chr17 84020674 84020799 -5483754 + MIR SINE MIR 28 152 -110 21 0 0 0 chr17 84020894 84020915 -5483638 + AT_rich Low_complexity Low_complexity 1 21 0 339 308 43 8 chr17 84022003 84022120 -5482433 + L2 LINE L2 3126 3246 -26 2425 94 0 0 chr17 84023945 84024243 -5480310 + AluSx SINE Alu 1 298 -14 621 267 199 8 chr17 84024922 84025188 -5479365 - MLT1K LTR MaLR 0 588 272 447 271 40 11 chr17 84025619 84025796 -5478757 + LTR16C LTR ERVL 299 480 -11 393 275 111 15 chr17 84025979 84026182 -5478371 - MIR SINE MIR -7 255 5 198 259 69 0 chr17 84027952 84028010 -5476543 + MIR3 SINE MIR 114 175 -33 2255 105 0 3 chr17 84029161 84029455 -5475098 - AluSc SINE Alu -16 293 1 424 333 53 10 chr17 84029574 84029781 -5474772 + MIR SINE MIR 31 246 -16 351 0 0 0 chr17 84030779 84030818 -5473735 + (TTA)n Simple_repeat Simple_repeat 2 40 0 2040 106 7 4 chr17 84030826 84031100 -5473453 - AluSx SINE Alu -37 275 1 276 313 240 17 chr17 84031171 84031350 -5473203 + MIR SINE MIR 13 231 -31 514 71 12 24 chr17 84032054 84032139 -5472414 + (TTCA)n Simple_repeat Simple_repeat 1 84 0 374 322 63 49 chr17 84032144 84032430 -5472123 - L2 LINE L2 -18 3295 3006 400 200 39 62 chr17 84032430 84032560 -5471993 + L2 LINE L2 2184 2310 -1004 1596 300 134 16 chr17 84032575 84033548 -5471005 - L2 LINE L2 -338 2976 1890 1761 232 14 87 chr17 84033562 84033939 -5470614 - L1MB5 LINE L1 -17 6157 5835 707 158 37 24 chr17 84033939 84034103 -5470450 - L1MA8 LINE L1 -10 6281 6116 1761 232 14 87 chr17 84034103 84034302 -5470251 - L1MB5 LINE L1 -339 5835 5623 655 294 39 21 chr17 84034302 84034588 -5469965 - L2 LINE L2 -1418 1896 1606 22 0 0 0 chr17 84035266 84035288 -5469265 + AT_rich Low_complexity Low_complexity 1 22 0 2347 128 22 15 chr17 84035293 84035693 -5468860 - MER57A LTR ERV1 0 403 1 224 256 134 12 chr17 84036995 84037077 -5467476 + MIR SINE MIR 85 176 -86 666 300 136 56 chr17 84037788 84038430 -5466123 - MER21B LTR ERV1 -4 601 63 1271 114 6 11 chr17 84039218 84039393 -5465160 + AluSx SINE Alu 1 174 -138 2014 181 15 12 chr17 84039493 84039901 -5464652 + L1MB5 LINE L1 5764 6172 -2 2309 75 0 7 chr17 84040041 84040350 -5464203 - AluSc SINE Alu 0 307 1 21 0 0 0 chr17 84040984 84041005 -5463548 + AT_rich Low_complexity Low_complexity 1 21 0 820 297 100 9 chr17 84041387 84041470 -5463083 + MLT1K LTR MaLR 141 215 -373 3852 92 2 19 chr17 84041470 84041908 -5462645 + MER41A LTR ERV1 1 428 -126 2588 60 0 0 chr17 84041908 84042209 -5462344 - AluY SINE Alu -10 301 1 3852 92 2 19 chr17 84042209 84042333 -5462220 + MER41A LTR ERV1 428 553 -1 820 297 100 9 chr17 84042333 84042589 -5461964 + MLT1K LTR MaLR 215 511 -77 918 342 153 51 chr17 84043638 84044455 -5460098 - L3 LINE CR1 -316 1261 300 1938 148 36 18 chr17 84044455 84044792 -5459761 + MER61A LTR ERV1 1 343 0 918 342 153 51 chr17 84044792 84045081 -5459472 - L3 LINE CR1 -1277 300 42 218 241 0 19 chr17 84045165 84045219 -5459334 - L2 LINE L2 -3 3269 3217 2140 107 95 18 chr17 84045320 84045656 -5458897 - THE1B LTR MaLR 0 364 3 26 0 0 0 chr17 84046306 84046332 -5458221 + AT_rich Low_complexity Low_complexity 1 26 0 1795 162 37 67 chr17 84046332 84046676 -5457877 + LTR54 LTR ERV1 2 355 -155 647 25 12 0 chr17 84046676 84046757 -5457796 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 2186 107 0 0 chr17 84046763 84047044 -5457509 - AluSq SINE Alu -32 281 1 1795 162 37 67 chr17 84047044 84047124 -5457429 + LTR54 LTR ERV1 360 420 -90 1419 143 53 20 chr17 84047128 84047372 -5457181 - AluJo SINE Alu 0 312 61 2627 177 6 0 chr17 84048322 84048808 -5455745 - L1MC3 LINE L1 -103 7682 7194 236 236 28 28 chr17 84048811 84048883 -5455670 - MLT1F1 LTR MaLR -442 125 54 1433 154 0 0 chr17 84048883 84049097 -5455456 - AluSg/x SINE Alu -4 308 95 2771 190 47 43 chr17 84049097 84049353 -5455200 - L1MC3 LINE L1 -659 7126 6872 276 53 0 0 chr17 84049353 84049391 -5455162 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2771 190 47 43 chr17 84049391 84049801 -5454752 - L1MC3 LINE L1 -913 6872 6458 261 239 56 0 chr17 84049822 84049893 -5454660 + MER21B LTR ERV1 24 98 -765 454 183 83 153 chr17 84049928 84050157 -5454396 + MER21B LTR ERV1 98 310 -553 1759 221 98 17 chr17 84050165 84050636 -5453917 - LTR22 LTR ERVK 0 509 1 599 288 58 28 chr17 84050640 84051055 -5453498 + MER21B LTR ERV1 316 709 -5 2207 210 14 0 chr17 84051063 84051506 -5453047 - L1MC3 LINE L1 -1325 6460 6012 896 264 40 0 chr17 84051528 84051778 -5452775 - L1ME1 LINE L1 -7 6159 5900 2400 257 69 12 chr17 84051799 84052527 -5452026 - MER21B LTR ERV1 -51 812 44 235 313 0 16 chr17 84052527 84052591 -5451962 - MER21B LTR ERV1 -782 81 19 506 154 11 32 chr17 84052613 84052712 -5451841 - MER21B LTR ERV1 -773 90 1 1860 226 51 37 chr17 84052736 84053054 -5451499 - L1ME1 LINE L1 -279 5887 5558 2371 84 10 13 chr17 84053054 84053242 -5451311 - AluY SINE Alu -1 310 122 207 0 0 0 chr17 84053242 84053265 -5451288 + (TG)n Simple_repeat Simple_repeat 2 24 0 2371 84 10 13 chr17 84053265 84053387 -5451166 - AluY SINE Alu -189 122 1 1860 226 51 37 chr17 84053387 84053582 -5450971 - L1ME1 LINE L1 -608 5558 5367 430 290 127 29 chr17 84053832 84054139 -5450414 + L2 LINE L2 2419 2755 -559 224 288 78 16 chr17 84055803 84055972 -5448581 + MIR3 SINE MIR 3 180 -73 32 26 0 0 chr17 84056690 84056729 -5447824 + AT_rich Low_complexity Low_complexity 1 39 0 1973 149 3 7 chr17 84056746 84057048 -5447505 - AluSx SINE Alu -11 301 1 423 68 0 0 chr17 84057219 84057278 -5447275 + (TG)n Simple_repeat Simple_repeat 1 59 0 237 276 103 0 chr17 84057904 84057991 -5446562 - MIR3 SINE MIR -2 206 111 189 245 20 59 chr17 84058264 84058366 -5446187 - L2 LINE L2 0 3272 3175 2473 235 52 34 chr17 84058829 84059346 -5445207 + L1MC4 LINE L1 7211 7717 -278 2228 108 0 7 chr17 84059346 84059664 -5444889 + AluSx SINE Alu 1 316 0 2473 235 52 34 chr17 84059664 84059838 -5444715 + L1MC4 LINE L1 7717 7860 -135 2313 78 20 10 chr17 84059838 84060133 -5444420 + AluSc SINE Alu 1 298 -11 2473 235 52 34 chr17 84060133 84060272 -5444281 + L1MC4 LINE L1 7860 7995 0 301 308 63 38 chr17 84060520 84060679 -5443874 - HAL1 LINE L1 -1295 1212 1050 266 217 14 0 chr17 84060679 84060748 -5443805 + CT-rich Low_complexity Low_complexity 2 71 0 1678 180 7 3 chr17 84061324 84061619 -5442934 - AluJb SINE Alu -12 300 5 2293 120 0 3 chr17 84061850 84062158 -5442395 + AluSq SINE Alu 1 307 -6 1092 217 99 44 chr17 84062695 84063059 -5441494 + MLT1C LTR MaLR 78 461 -6 230 259 99 12 chr17 84063075 84063156 -5441397 - L2 LINE L2 -14 3299 3212 3180 120 2 18 chr17 84063232 84063724 -5440829 + MER1A DNA MER1_type 46 529 0 2341 106 3 0 chr17 84063985 84064296 -5440257 + AluSx SINE Alu 1 312 0 443 235 66 29 chr17 84064674 84064810 -5439743 - MIR SINE MIR -51 211 71 675 240 50 15 chr17 84064823 84065023 -5439530 + HsTC2 DNA Tc2 1689 1895 -3 339 311 92 0 chr17 84065032 84065151 -5439402 - L2 LINE L2 -1 3312 3183 2147 128 42 28 chr17 84065341 84065700 -5438853 + THE1B LTR MaLR 1 364 0 952 108 24 0 chr17 84066200 84066420 -5438133 + (TTCA)n Simple_repeat Simple_repeat 1 225 0 225 338 26 0 chr17 84066423 84066500 -5438053 - L2 LINE L2 -9 3304 3226 227 122 20 0 chr17 84067873 84067922 -5436631 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 794 236 49 11 chr17 84068043 84068327 -5436226 + L1M4 LINE L1 4447 4741 -1405 1831 265 154 18 chr17 84068597 84069723 -5434830 - L1MEc LINE L1 -4456 1940 661 1488 276 38 65 chr17 84069868 84070004 -5434549 - L1MEc LINE L1 -4751 1645 1507 2230 107 10 0 chr17 84070004 84070295 -5434258 - AluSg SINE Alu -16 294 1 1488 276 38 65 chr17 84070295 84070793 -5433760 - L1MEc LINE L1 -4889 1507 997 203 0 37 0 chr17 84070793 84070820 -5433733 + (TA)n Simple_repeat Simple_repeat 1 28 0 1488 276 38 65 chr17 84070820 84071610 -5432943 - L1MEc LINE L1 -5399 997 325 2044 138 0 7 chr17 84071610 84071949 -5432604 - AluSx SINE Alu 0 312 1 1488 276 38 65 chr17 84071949 84072104 -5432449 - L1MEc LINE L1 -6071 325 167 504 295 22 16 chr17 84072340 84072523 -5432030 - MLT1L LTR MaLR -397 218 35 1732 189 45 64 chr17 84072655 84073126 -5431427 + MLT1C LTR MaLR 6 467 0 2222 181 20 110 chr17 84073483 84074030 -5430523 + MLT2B3 LTR ERVL 1 498 -22 658 170 21 0 chr17 84074042 84074183 -5430370 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 412 67 0 0 chr17 84074183 84074243 -5430310 + MLT2B3 LTR ERVL 458 517 -3 852 104 0 0 chr17 84074752 84074877 -5429676 + (ATG)n Simple_repeat Simple_repeat 1 125 0 345 313 18 9 chr17 84074903 84075015 -5429538 - MIR SINE MIR -62 200 88 202 270 135 8 chr17 84075137 84075263 -5429290 + MIR SINE MIR 68 209 -53 202 162 0 61 chr17 84125767 84125866 -5378687 + A-rich Low_complexity Low_complexity 2 94 0 * 457 212 6 22 chr17 84125855 84126034 -5378519 + GA-rich Low_complexity Low_complexity 3 178 0 363 318 8 8 chr17 84126034 84126166 -5378387 + (TGGG)n Simple_repeat Simple_repeat 3 134 0 434 237 8 12 chr17 84126182 84126423 -5378130 + (TGGA)n Simple_repeat Simple_repeat 1 240 0 261 330 11 0 chr17 84126431 84126522 -5378031 + MLT1H1 LTR MaLR 95 186 -369 252 236 0 42 chr17 84126531 84126603 -5377950 - MLT1L LTR MaLR -486 69 1 2267 111 0 16 chr17 84128123 84128438 -5376115 - AluSx SINE Alu 0 312 3 230 316 92 10 chr17 84128616 84128714 -5375839 - MIR SINE MIR -68 140 35 427 321 181 0 chr17 84129009 84129252 -5375301 - L2 LINE L2 0 3272 2986 190 377 75 35 chr17 84129448 84129766 -5374787 - L3 LINE CR1 -80 1497 1167 210 358 25 0 chr17 84130148 84130229 -5374324 + G-rich Low_complexity Low_complexity 6 88 0 245 237 0 53 chr17 84130274 84130350 -5374203 + (ATGGTG)n Simple_repeat Simple_repeat 3 74 0 281 346 31 0 chr17 84131376 84131506 -5373047 + MIR SINE MIR 118 251 -11 1889 196 14 24 chr17 84132798 84133212 -5371341 + MLT1F LTR MaLR 131 540 -2 2228 120 37 0 chr17 84133488 84133837 -5370716 + THE1B LTR MaLR 1 362 -2 694 266 127 39 chr17 84134118 84134505 -5370048 + MLT1H LTR MaLR 109 529 -20 218 273 18 0 chr17 84134661 84134716 -5369837 + (CA)n Simple_repeat Simple_repeat 2 57 0 439 133 13 0 chr17 84134778 84134853 -5369700 - AluSq SINE Alu -1 302 227 1260 99 0 0 chr17 84134853 84135014 -5369539 - AluSq SINE Alu -152 161 1 969 218 81 13 chr17 84135014 84135162 -5369391 - L1PA16 LINE L1 -6 6160 5989 180 0 0 0 chr17 84135162 84135182 -5369371 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 969 218 81 13 chr17 84135182 84135267 -5369286 - L1PA16 LINE L1 -177 5989 5911 396 307 109 15 chr17 84136123 84136278 -5368275 + L1ME4a LINE L1 5517 5697 -2111 2488 34 41 0 chr17 84136278 84136570 -5367983 + AluY SINE Alu 1 304 -7 396 307 109 15 chr17 84136570 84136616 -5367937 + L1ME4a LINE L1 5697 5737 -2071 1533 129 64 30 chr17 84137108 84137372 -5367181 - AluJb SINE Alu -14 298 26 430 285 125 31 chr17 84137504 84137855 -5366698 + L1ME4a LINE L1 5736 6119 -2 438 304 90 15 chr17 84138729 84138840 -5365713 + L1MEc LINE L1 1277 1378 -5018 441 0 0 0 chr17 84138840 84138889 -5365664 + (CA)n Simple_repeat Simple_repeat 2 50 0 438 304 90 15 chr17 84138889 84139112 -5365441 + L1MEc LINE L1 1378 1636 -4760 1102 218 95 123 chr17 84139115 84139218 -5365335 + L1ME3A LINE L1 5644 5748 -422 2212 105 6 16 chr17 84139218 84139533 -5365020 + AluSx SINE Alu 1 312 0 1102 218 95 123 chr17 84139533 84139966 -5364587 + L1ME3A LINE L1 5748 6165 -5 23 68 0 0 chr17 84140199 84140243 -5364310 + AT_rich Low_complexity Low_complexity 1 44 0 652 268 86 60 chr17 84140424 84141044 -5363509 + L1MEc LINE L1 1627 2262 -4134 2090 143 0 6 chr17 84141593 84141907 -5362646 + AluJb SINE Alu 1 312 0 540 239 61 44 chr17 84142202 84142382 -5362171 - MLT1G LTR MaLR 0 590 408 206 273 15 0 chr17 84142606 84142672 -5361881 + (CA)n Simple_repeat Simple_repeat 1 67 0 2095 124 0 3 chr17 84143242 84143533 -5361020 + AluSx SINE Alu 1 290 -22 285 356 76 36 chr17 84144123 84144398 -5360155 - L2 LINE L2 -41 3231 2946 476 214 45 0 chr17 84144917 84145029 -5359524 + MIR SINE MIR 31 147 -115 226 208 21 0 chr17 84146412 84146460 -5358093 + L2 LINE L2 3211 3259 -13 288 0 0 0 chr17 84146464 84146496 -5358057 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 433 253 11 0 chr17 84148549 84148727 -5355826 + (TG)n Simple_repeat Simple_repeat 1 180 0 418 261 0 22 chr17 84148746 84148930 -5355623 + (TG)n Simple_repeat Simple_repeat 1 180 0 376 283 6 6 chr17 84148961 84149141 -5355412 + (TG)n Simple_repeat Simple_repeat 1 180 0 448 261 6 6 chr17 84149172 84149352 -5355201 + (TG)n Simple_repeat Simple_repeat 1 180 0 184 194 65 0 chr17 84149388 84149450 -5355103 + (CATG)n Simple_repeat Simple_repeat 4 69 0 919 145 7 13 chr17 84149497 84149649 -5354904 - FAM SINE Alu -30 155 5 1232 238 129 29 chr17 84151187 84151599 -5352954 + LTR16C LTR ERVL 36 488 -3 286 306 142 73 chr17 84151796 84151843 -5352710 + L3 LINE CR1 932 974 -603 2544 175 74 12 chr17 84151843 84152328 -5352225 + MLT2B2 LTR ERVL 1 515 0 286 306 142 73 chr17 84152328 84152418 -5352135 + L3 LINE CR1 974 1056 -521 2716 174 45 102 chr17 84152418 84152977 -5351576 + MER1A DNA MER1_type 1 527 0 286 306 142 73 chr17 84152977 84153155 -5351398 + L3 LINE CR1 1056 1270 -307 2294 102 0 0 chr17 84153185 84153488 -5351065 + AluSg SINE Alu 1 303 -7 1004 233 118 48 chr17 84153509 84153840 -5350713 - MLT1A1 LTR MaLR -1 364 11 246 341 177 18 chr17 84153841 84154005 -5350548 + L3 LINE CR1 1311 1500 -77 479 217 67 8 chr17 84155320 84155440 -5349113 + LTR37A LTR ERV1 46 172 -254 1438 116 9 5 chr17 84155607 84155822 -5348731 - AluSg SINE Alu -93 217 2 24 32 0 0 chr17 84155822 84155853 -5348700 + AT_rich Low_complexity Low_complexity 1 31 0 849 98 23 15 chr17 84156092 84156224 -5348329 + AluSq/x SINE Alu 1 133 -180 207 0 0 0 chr17 84156347 84156370 -5348183 + (CTG)n Simple_repeat Simple_repeat 1 23 0 313 107 36 18 chr17 84156414 84156470 -5348083 - MSTD LTR MaLR -338 58 2 374 253 41 65 chr17 84156471 84156616 -5347937 + L1MB8 LINE L1 6006 6148 -30 1972 165 15 85 chr17 84156616 84156734 -5347819 - MLT1B LTR MaLR -4 386 261 1802 153 23 7 chr17 84156734 84157034 -5347519 - AluJb SINE Alu -7 305 1 1972 165 15 85 chr17 84157034 84157327 -5347226 - MLT1B LTR MaLR -129 261 4 374 253 41 65 chr17 84157327 84157351 -5347202 + L1MB8 LINE L1 6148 6171 -7 374 271 342 8 chr17 84158723 84159110 -5345443 + L2 LINE L2 2501 3013 -300 725 233 81 38 chr17 84159138 84159348 -5345205 - MER58A DNA MER1_type 0 224 6 540 343 14 19 chr17 84159367 84159580 -5344973 + L2 LINE L2 3085 3296 -17 295 261 102 33 chr17 84159897 84160059 -5344494 - MIR SINE MIR -64 198 23 2072 227 66 33 chr17 84160326 84160880 -5343673 - MLT1E LTR MaLR -27 556 1 634 314 5 0 chr17 84160887 84161078 -5343475 - L3 LINE CR1 -101 1476 1285 2088 131 0 7 chr17 84161080 84161386 -5343167 + AluSx SINE Alu 1 304 -8 314 214 71 24 chr17 84161671 84161755 -5342798 - MIR SINE MIR -105 103 16 186 244 0 0 chr17 84162573 84162614 -5341939 + MIR SINE MIR 220 260 -2 471 301 11 45 chr17 84162807 84162905 -5341648 - MIR SINE MIR 0 262 171 587 239 0 0 chr17 84162905 84163018 -5341535 + MER81 DNA DNA 1 113 -1 471 301 11 45 chr17 84163018 84163095 -5341458 - MIR SINE MIR -91 171 93 2106 99 7 13 chr17 84163099 84163401 -5341152 + AluSx SINE Alu 1 300 -12 3460 197 37 34 chr17 84163412 84164030 -5340523 + L1MB5 LINE L1 5308 5931 -243 1793 103 18 28 chr17 84164030 84164312 -5340241 - AluSx SINE Alu -10 302 24 3460 197 37 34 chr17 84164312 84164557 -5339996 + L1MB5 LINE L1 5931 6174 0 2219 104 3 3 chr17 84164904 84165213 -5339340 + AluSx SINE Alu 1 309 -3 207 0 0 0 chr17 84165213 84165236 -5339317 + (GA)n Simple_repeat Simple_repeat 2 24 0 204 268 42 14 chr17 84167008 84167079 -5337474 - MIR SINE MIR -127 135 63 217 231 33 44 chr17 84167236 84167327 -5337226 + MER5A DNA MER1_type 44 133 -56 1615 296 106 17 chr17 84167993 84168717 -5335836 - L1ME3A LINE L1 -3 6167 5379 3782 147 36 3 chr17 84168742 84169381 -5335172 - L1MA4 LINE L1 -5 6295 5636 353 310 20 53 chr17 84169395 84169703 -5334850 + L1MC4 LINE L1 6528 6703 -1339 * 370 307 51 36 chr17 84169689 84170087 -5334466 + L1MC4 LINE L1 6525 6703 -1339 * 418 308 62 40 chr17 84170073 84170550 -5334003 + L1MC4 LINE L1 6528 6703 -1339 387 302 24 40 chr17 84170579 84170928 -5333625 + L1MC4 LINE L1 6528 6703 -1339 761 319 43 27 chr17 84170964 84171337 -5333216 - L1M4 LINE L1 -2195 3951 3573 810 192 2 0 chr17 84171740 84172150 -5332403 + (TG)n Simple_repeat Simple_repeat 1 411 0 457 204 13 0 chr17 84172172 84172324 -5332229 + (TG)n Simple_repeat Simple_repeat 1 154 0 251 373 71 0 chr17 84173451 84173620 -5330933 + MIR3 SINE MIR 24 204 -4 214 186 23 0 chr17 84174203 84174246 -5330307 + GA-rich Low_complexity Low_complexity 4 47 0 302 345 64 12 chr17 84174778 84174949 -5329604 - MIR3 SINE MIR -4 204 25 2138 124 22 70 chr17 84175669 84176071 -5328482 - Tigger2a DNA MER2_type -51 383 1 1884 150 60 35 chr17 84177586 84177952 -5326601 + THE1C LTR MaLR 1 375 0 567 228 89 11 chr17 84178207 84178387 -5326166 + LTR16B LTR ERVL 269 462 -2 1244 226 97 26 chr17 84178982 84179406 -5325147 - MLT1C LTR MaLR -8 459 6 642 26 0 0 chr17 84179840 84179916 -5324637 + (TTCCC)n Simple_repeat Simple_repeat 3 78 0 288 159 14 14 chr17 84180374 84180443 -5324110 + C-rich Low_complexity Low_complexity 3 71 0 289 197 0 26 chr17 84181000 84181076 -5323477 + MER69 DNA AcHobo 2437 2510 -16 202 212 264 0 chr17 84181717 84181839 -5322714 + MIR SINE MIR 38 192 -61 199 275 87 14 chr17 84182399 84182468 -5322085 - L3b LINE CR1 -188 1395 1322 2229 105 0 3 chr17 84183377 84183682 -5320871 + AluSx SINE Alu 1 304 -8 200 269 26 51 chr17 84184045 84184123 -5320430 - L2 LINE L2 -9 3263 3188 744 254 164 8 chr17 84184649 84184917 -5319636 + L2 LINE L2 2238 2547 -767 705 199 65 25 chr17 84184918 84185119 -5319434 + L1MD3 LINE L1 7777 7985 -10 903 155 15 130 chr17 84185139 84185339 -5319214 - MLT1C LTR MaLR -1 466 213 469 170 0 11 chr17 84185341 84185435 -5319118 - L1MCa LINE L1 -4252 2174 2082 975 262 36 75 chr17 84185566 84185595 -5318958 + MER87 LTR ERV1 168 197 -344 2725 102 5 3 chr17 84185595 84185969 -5318584 - THE1C LTR MaLR 0 375 1 975 262 36 75 chr17 84185969 84186328 -5318225 + MER87 LTR ERV1 197 541 0 1663 128 45 18 chr17 84186328 84186664 -5317889 - L1MCa LINE L1 -4341 2085 1741 3489 152 14 3 chr17 84186680 84187251 -5317302 - L1MB3 LINE L1 0 6183 5607 1101 181 83 53 chr17 84187251 84187517 -5317036 - MER66B LTR ERV1 -1 485 212 1475 153 20 7 chr17 84187517 84187818 -5316735 + L1MCa LINE L1 960 1264 -5162 242 345 0 0 chr17 84187918 84188002 -5316551 - MIR SINE MIR -89 173 90 2270 40 0 7 chr17 84189398 84189675 -5314878 - L1PA4 LINE L1 -3 6152 5878 1842 127 121 3 chr17 84190063 84190394 -5314159 + THE1C LTR MaLR 6 375 0 653 254 127 9 chr17 84190396 84190609 -5313944 + MIR SINE MIR 25 262 0 2308 136 5 32 chr17 84190793 84191167 -5313386 + THE1B LTR MaLR 1 364 0 2038 172 19 8 chr17 84191754 84192139 -5312414 - MLT1B LTR MaLR -1 466 1 2207 107 0 3 chr17 84192160 84192470 -5312083 - AluSx SINE Alu -3 309 1 265 327 78 13 chr17 84192967 84193120 -5311433 - L2 LINE L2 -465 2849 2687 1645 155 3 24 chr17 84193489 84193779 -5310774 + AluJo SINE Alu 1 284 -28 539 223 65 9 chr17 84193811 84193981 -5310572 - MIR SINE MIR -63 145 10 511 292 157 0 chr17 84194532 84194710 -5309843 - LTR16A LTR ERVL 0 450 245 1300 189 32 122 chr17 84194747 84195149 -5309404 + MLT1B LTR MaLR 4 369 -21 3927 219 50 33 chr17 84195244 84195669 -5308884 - L1ME1 LINE L1 -5 6230 5814 1210 158 184 58 chr17 84195669 84196049 -5308504 + MSTC LTR MaLR 1 428 0 3927 219 50 33 chr17 84196049 84197860 -5306693 - L1ME1 LINE L1 -421 5814 3959 3206 249 76 20 chr17 84197830 84199239 -5305314 - L1ME1 LINE L1 -2665 3550 1835 * 2321 73 9 22 chr17 84199239 84199554 -5304999 - AluY SINE Alu 0 311 1 3206 249 76 20 chr17 84199554 84200120 -5304433 - L1ME1 LINE L1 -4380 1835 1302 859 243 120 50 chr17 84200195 84200536 -5304017 - MLT1A1 LTR MaLR 0 365 1 1786 126 31 8 chr17 84200559 84200737 -5303816 - AluSg SINE Alu -4 306 119 279 0 0 0 chr17 84200737 84200768 -5303785 + (TG)n Simple_repeat Simple_repeat 2 32 0 1786 126 31 8 chr17 84200768 84200850 -5303703 - AluSg SINE Alu -191 119 40 429 218 82 6 chr17 84200863 84201033 -5303520 - L1ME1 LINE L1 -5243 1153 971 1677 177 12 25 chr17 84201034 84201361 -5303192 + MER44D DNA MER2_type 17 609 0 392 0 21 0 chr17 84201367 84201415 -5303138 + (TG)n Simple_repeat Simple_repeat 1 49 0 1275 264 33 53 chr17 84201425 84201913 -5302640 - L1ME1 LINE L1 -5472 924 447 192 40 0 0 chr17 84201913 84201938 -5302615 + (CA)n Simple_repeat Simple_repeat 1 25 0 1275 264 33 53 chr17 84201938 84201999 -5302554 - L1ME1 LINE L1 -5949 447 386 660 224 0 10 chr17 84202049 84202540 -5302013 + (TG)n Simple_repeat Simple_repeat 1 485 0 467 238 7 0 chr17 84202554 84202705 -5301848 + (TG)n Simple_repeat Simple_repeat 1 152 0 543 333 38 4 chr17 84202733 84202997 -5301556 - L1ME1 LINE L1 -6045 351 79 564 293 43 26 chr17 84203047 84203279 -5301274 - HERV16 LTR ERVL -2740 2256 2021 1330 208 21 66 chr17 84203281 84203309 -5301244 - MLT1A1 LTR MaLR -2 363 335 1485 110 35 22 chr17 84203309 84203536 -5301017 + MER30 DNA MER1_type 1 230 0 1330 208 21 66 chr17 84203536 84203886 -5300667 - MLT1A1 LTR MaLR -30 335 2 295 325 84 19 chr17 84203949 84204103 -5300450 - MIR SINE MIR -13 249 86 439 300 6 6 chr17 84204684 84204844 -5299709 + MER117 DNA MER1_type 4 163 -34 355 293 72 60 chr17 84205137 84205304 -5299249 + L2 LINE L2 3121 3289 -24 429 329 40 7 chr17 84205805 84205957 -5298596 - MIR SINE MIR -19 243 87 306 225 0 28 chr17 84206222 84206293 -5298260 + Tigger2 DNA MER2_type 1 69 -2649 * 1763 183 50 11 chr17 84206266 84206644 -5297909 + Tigger2 DNA MER2_type 2256 2648 -70 214 305 159 13 chr17 84206658 84206809 -5297744 + MIR SINE MIR 28 200 -62 251 287 23 11 chr17 84207558 84207645 -5296908 - MIR SINE MIR -168 94 7 273 57 0 0 chr17 84211346 84211381 -5293172 + (TC)n Simple_repeat Simple_repeat 2 36 0 288 0 0 0 chr17 84211381 84211413 -5293140 + (CA)n Simple_repeat Simple_repeat 1 32 0 195 283 75 0 chr17 84211960 84212013 -5292540 - MIR SINE MIR -61 147 91 225 0 0 0 chr17 84212022 84212047 -5292506 + (CA)n Simple_repeat Simple_repeat 2 26 0 599 207 166 12 chr17 84212303 84212472 -5292081 + MER58A DNA MER1_type 29 223 -1 248 315 89 78 chr17 84212586 84212856 -5291697 - L2 LINE L2 -3 3269 2997 379 268 43 55 chr17 84212892 84213056 -5291497 - L2 LINE L2 -943 2371 2210 3882 276 51 34 chr17 84213235 84215069 -5289484 + L1MEc LINE L1 46 1910 -4486 2449 217 41 46 chr17 84215066 84215447 -5289106 - L1ME1 LINE L1 -302 5864 5483 * 2007 151 7 7 chr17 84215447 84215751 -5288802 + AluSx SINE Alu 1 304 -8 2449 217 41 46 chr17 84215751 84216369 -5288184 - L1ME1 LINE L1 -683 5483 4862 1229 232 32 31 chr17 84216377 84216788 -5287765 + L1MEc LINE L1 1914 2279 -3936 267 308 117 56 chr17 84217385 84217599 -5286954 + L2 LINE L2 3044 3270 -2 802 266 50 0 chr17 84217791 84217990 -5286563 + MER3 DNA MER1_type 1 209 0 187 352 32 48 chr17 84218843 84218968 -5285585 - MER5A DNA MER1_type -34 155 33 325 237 19 19 chr17 84219659 84219815 -5284738 + G-rich Low_complexity Low_complexity 2 157 0 328 261 75 96 chr17 84219882 84220081 -5284472 + MIR3 SINE MIR 8 202 -6 2086 150 131 34 chr17 84220836 84220891 -5283662 - MER74A LTR ERVL -30 528 480 2238 105 0 13 chr17 84220891 84221196 -5283357 + AluSx SINE Alu 1 301 -11 2086 150 131 34 chr17 84221196 84221235 -5283318 - MER74A LTR ERVL -78 480 446 459 92 0 0 chr17 84221235 84221300 -5283253 + (CATGC)n Simple_repeat Simple_repeat 5 69 0 2086 150 131 34 chr17 84221300 84221678 -5282875 - MER74A LTR ERVL -112 446 9 1263 199 31 40 chr17 84221822 84222144 -5282409 + MER33 DNA MER1_type 2 320 -4 232 311 73 60 chr17 84222885 84223036 -5281517 + MIR SINE MIR 8 160 -102 1006 235 80 14 chr17 84223037 84223326 -5281227 + MER21B LTR ERV1 1 308 -555 1733 170 0 46 chr17 84223330 84223653 -5280900 + AluJo SINE Alu 1 308 -4 2497 198 4 11 chr17 84223676 84224211 -5280342 - L1M4 LINE L1 -884 5262 4732 621 290 57 27 chr17 84224330 84224592 -5279961 + MER21B LTR ERV1 466 735 -128 200 276 79 13 chr17 84224608 84224684 -5279869 + MIR SINE MIR 162 242 -20 360 316 35 0 chr17 84224785 84224899 -5279654 + MIR3 SINE MIR 87 204 -4 1269 153 10 50 chr17 84225740 84226018 -5278535 - MER1B DNA MER1_type 0 339 1 235 336 17 34 chr17 84226041 84226160 -5278393 - MIR3 SINE MIR -7 201 85 1809 215 123 18 chr17 84226188 84226682 -5277871 - MER77 LTR ERV1 -6 599 54 1817 183 7 0 chr17 84227162 84227457 -5277096 + AluJo SINE Alu 1 297 -15 218 308 75 9 chr17 84228862 84228969 -5275584 - L2 LINE L2 0 3272 3159 223 122 0 49 chr17 84229098 84229139 -5275414 + L2 LINE L2 3233 3271 -1 2508 122 3 16 chr17 84229319 84229688 -5274865 - THE1B LTR MaLR 0 364 1 267 292 15 69 chr17 84229888 84230018 -5274535 - MIR SINE MIR -65 197 75 452 254 0 26 chr17 84230182 84230296 -5274257 - MER63A DNA MER1_type -30 180 70 767 256 72 5 chr17 84231384 84231579 -5272974 - MER63A DNA MER1_type 0 210 3 3364 142 66 14 chr17 84231648 84232269 -5272284 + MER39B LTR ERV1 1 653 0 1849 143 44 14 chr17 84232677 84232970 -5271583 + AluSx SINE Alu 11 312 0 375 269 58 77 chr17 84234451 84234607 -5269946 + MIR SINE MIR 94 246 -16 211 274 0 0 chr17 84234613 84234664 -5269889 + L2 LINE L2 3209 3259 -13 368 243 79 7 chr17 84235106 84235246 -5269307 - L1ME4a LINE L1 -11 6110 5961 217 242 25 150 chr17 84235370 84235490 -5269063 - MER5B DNA MER1_type -68 110 6 2443 88 3 3 chr17 84235610 84235915 -5268638 - AluSq SINE Alu -8 305 1 205 179 0 0 chr17 84236022 84236061 -5268492 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 2194 98 3 26 chr17 84236111 84236417 -5268136 - AluSx SINE Alu -13 299 1 1547 145 0 88 chr17 84237133 84237430 -5267123 - AluJo SINE Alu -31 281 11 261 219 188 31 chr17 84238088 84238216 -5266337 + MER90 LTR ERV1 1 148 -427 831 261 26 9 chr17 84238234 84238464 -5266089 + MER90 LTR ERV1 380 613 -1 463 261 18 9 chr17 84238464 84238573 -5265980 - MER3 DNA MER1_type -99 110 1 388 304 147 42 chr17 84238584 84238737 -5265816 + MIR SINE MIR 48 226 -36 2428 211 77 11 chr17 84238737 84239269 -5265284 + MLT1F1 LTR MaLR 1 567 0 388 304 147 42 chr17 84239269 84239306 -5265247 + MIR SINE MIR 226 258 -4 2214 112 0 7 chr17 84242132 84242427 -5262126 - AluSq SINE Alu -20 293 1 228 312 11 21 chr17 84242459 84242552 -5262001 + CT-rich Low_complexity Low_complexity 1 92 0 2441 83 0 0 chr17 84242589 84242890 -5261663 - AluY SINE Alu -10 301 1 303 267 59 10 chr17 84242898 84242999 -5261554 + MER63 DNA MER1_type 731 836 -225 413 220 0 11 chr17 84244809 84244900 -5259653 + L1MB5 LINE L1 6085 6174 0 306 250 88 0 chr17 84246095 84246175 -5258378 - L1ME4a LINE L1 -1 6120 6034 2177 109 0 0 chr17 84246177 84246470 -5258083 + AluSx SINE Alu 1 293 -19 704 170 21 103 chr17 84246551 84246658 -5257895 + MER45A DNA AcHobo 1 86 -1495 597 168 84 69 chr17 84246658 84246789 -5257764 - FLAM_A SINE Alu 0 133 1 704 170 21 103 chr17 84246789 84246875 -5257678 + MER45A DNA AcHobo 86 178 0 675 244 72 0 chr17 84247358 84247538 -5257015 + MER58A DNA MER1_type 32 224 0 238 400 0 40 chr17 84247538 84247663 -5256890 - MIR3 SINE MIR -48 160 41 296 227 144 10 chr17 84248838 84248935 -5255618 + MIR SINE MIR 81 190 -72 416 354 97 19 chr17 84249265 84249573 -5254980 + L2 LINE L2 2941 3272 0 207 253 0 0 chr17 84249575 84249654 -5254899 + (TGGA)n Simple_repeat Simple_repeat 4 82 0 835 169 6 0 chr17 84249696 84249874 -5254679 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2655 19 0 7 chr17 84250317 84250627 -5253926 + AluYa5 SINE Alu 1 308 -3 455 272 78 23 chr17 84250684 84250901 -5253652 + Charlie8 DNA MER1_type 50 278 -2139 371 50 0 8 chr17 84251337 84251402 -5253151 - MLT2B2 LTR ERVL 0 554 458 739 138 40 15 chr17 84251403 84251813 -5252740 + (TAGA)n Simple_repeat Simple_repeat 1 420 0 1863 219 64 16 chr17 84251813 84252266 -5252287 - MLT2B2 LTR ERVL -39 476 2 323 299 63 0 chr17 84253030 84253157 -5251396 + MER63 DNA MER1_type 1 761 -301 470 271 25 0 chr17 84253563 84253681 -5250872 + MIR SINE MIR 123 243 -19 282 200 23 8 chr17 84254489 84254620 -5249933 + CT-rich Low_complexity Low_complexity 1 133 0 252 364 77 2 chr17 84255606 84255772 -5248781 + MIR SINE MIR 10 185 -62 219 246 15 0 chr17 84256172 84256237 -5248316 + MIR SINE MIR 33 98 -110 348 295 85 7 chr17 84256446 84256636 -5247917 + MIR SINE MIR 35 240 -22 405 339 15 31 chr17 84257434 84257567 -5246986 + MIR SINE MIR 27 161 -101 1930 186 60 24 chr17 84257567 84257657 -5246896 + Tigger2a DNA MER2_type 1 86 -2622 336 48 0 0 chr17 84257657 84257699 -5246854 + (TCC)n Simple_repeat Simple_repeat 2 43 0 1930 186 60 24 chr17 84257699 84257789 -5246764 + Tigger2a DNA MER2_type 86 171 -2537 2190 112 0 3 chr17 84257789 84258093 -5246460 - AluSx SINE Alu -9 303 1 1930 186 60 24 chr17 84258093 84258330 -5246223 + Tigger2a DNA MER2_type 171 434 0 405 339 15 31 chr17 84258330 84258391 -5246162 + MIR SINE MIR 161 218 -44 184 271 43 71 chr17 84259119 84259189 -5245364 + MIR SINE MIR 18 85 -123 3063 106 18 18 chr17 84259215 84259659 -5244894 + MLT2A1 LTR ERVL 1 444 0 4792 124 21 11 chr17 84259912 84260919 -5243634 + SVA Other Other 1 866 -543 6273 82 22 56 chr17 84260943 84262123 -5242430 + SVA Other Other 432 1386 0 227 287 96 17 chr17 84262178 84262293 -5242260 + MIR SINE MIR 24 147 -61 602 296 155 22 chr17 84262587 84262813 -5241740 - MIR SINE MIR -5 257 2 197 305 171 12 chr17 84263154 84263236 -5241317 - L2 LINE L2 -19 3294 3200 248 276 5 65 chr17 84265947 84266132 -5238421 + (CACCC)n Simple_repeat Simple_repeat 4 177 0 350 304 10 0 chr17 84266157 84266259 -5238294 + C-rich Low_complexity Low_complexity 1 103 0 220 320 103 10 chr17 84267674 84267771 -5236782 + MIR SINE MIR 85 190 -72 311 205 39 0 chr17 84267771 84267849 -5236704 - MER45A DNA AcHobo 0 178 98 1936 139 3 10 chr17 84267852 84268161 -5236392 + AluSx SINE Alu 3 309 -3 1577 163 0 49 chr17 84268940 84269108 -5235445 - LTR39 LTR ERV1 0 783 608 1755 162 10 22 chr17 84269108 84269422 -5235131 - AluSx SINE Alu -2 310 1 1577 163 0 49 chr17 84269422 84269581 -5234972 - LTR39 LTR ERV1 -175 608 412 322 255 33 78 chr17 84269603 84269756 -5234797 - MIR SINE MIR -78 184 39 1765 100 7 30 chr17 84270486 84270786 -5233767 - MER4A LTR ERV1 0 664 372 577 152 0 10 chr17 84270831 84270930 -5233623 - MER4A LTR ERV1 -566 98 1 213 260 0 0 chr17 84271417 84271494 -5233059 + (CA)n Simple_repeat Simple_repeat 1 77 0 2121 81 25 3 chr17 84272581 84272865 -5231688 + AluSx SINE Alu 9 298 -14 1128 166 35 39 chr17 84273496 84273725 -5230828 + AluJo SINE Alu 85 312 0 184 330 82 10 chr17 84273731 84273828 -5230725 - L3b LINE CR1 -202 1381 1278 2142 120 0 13 chr17 84274030 84274346 -5230207 - AluSx SINE Alu 0 312 1 192 152 0 0 chr17 84275113 84275146 -5229407 + GA-rich Low_complexity Low_complexity 4 36 0 185 203 0 34 chr17 84275171 84275230 -5229323 - L2 LINE L2 -337 2977 2921 1547 229 25 47 chr17 84275326 84275656 -5228897 - MER63 DNA MER1_type -5 1056 739 2231 98 0 16 chr17 84275656 84275972 -5228581 + AluY SINE Alu 1 311 0 1547 229 25 47 chr17 84275972 84276152 -5228401 - MER63 DNA MER1_type -322 739 557 861 230 123 0 chr17 84276138 84276390 -5228163 - MER63 DNA MER1_type -643 287 5 * 2217 87 0 63 chr17 84276469 84276604 -5227949 + AluSx SINE Alu 1 143 -169 2922 45 0 3 chr17 84276604 84276956 -5227597 + L1PA3 LINE L1 5805 6155 0 2217 87 0 63 chr17 84276956 84277152 -5227401 + AluSx SINE Alu 143 311 -1 1076 253 20 7 chr17 84278642 84278935 -5225618 + MER33 DNA MER1_type 20 316 -8 266 378 35 35 chr17 84279987 84280159 -5224394 - L2 LINE L2 -458 2856 2685 1879 129 0 4 chr17 84281943 84282221 -5222332 + AluSx SINE Alu 35 311 -1 569 266 87 5 chr17 84283026 84283210 -5221343 - LTR16C LTR ERVL -10 481 283 1051 180 76 102 chr17 84283788 84283960 -5220593 + L1MB5 LINE L1 5493 5653 -521 2140 104 7 3 chr17 84283960 84284269 -5220284 + AluSg SINE Alu 1 310 0 1051 180 76 102 chr17 84284269 84284440 -5220113 + L1MB5 LINE L1 5653 5827 -347 243 136 4 2 chr17 84284441 84284680 -5219873 + AluSx SINE Alu 1 298 -2 1432 156 26 109 chr17 84284680 84285064 -5219489 + L1MB5 LINE L1 5823 6174 0 363 305 0 0 chr17 84286538 84286692 -5217861 + (CA)n Simple_repeat Simple_repeat 1 154 0 249 57 0 0 chr17 84286920 84286955 -5217598 + (CA)n Simple_repeat Simple_repeat 1 35 0 600 227 0 0 chr17 84288438 84288588 -5215965 + (TG)n Simple_repeat Simple_repeat 1 150 0 192 349 128 41 chr17 84288960 84289373 -5215180 + L2 LINE L2 2251 2699 -615 238 318 125 57 chr17 84289538 84289818 -5214735 + L2 LINE L2 2958 3256 -16 1080 114 24 6 chr17 84290043 84290210 -5214343 + AluSg/x SINE Alu 137 306 -6 1765 146 34 24 chr17 84290528 84290822 -5213731 + AluSq SINE Alu 1 297 -16 1824 153 64 109 chr17 84290937 84291148 -5213405 + Tigger2a DNA MER2_type 1 183 -2525 1977 148 0 7 chr17 84291148 84291453 -5213100 - AluSx SINE Alu -9 303 1 1824 153 64 109 chr17 84291453 84291691 -5212862 + Tigger2a DNA MER2_type 183 430 -4 396 0 0 0 chr17 84292815 84292859 -5211694 + (ATG)n Simple_repeat Simple_repeat 1 44 0 182 374 57 8 chr17 84292892 84293015 -5211538 - L2 LINE L2 -462 2852 2724 564 197 15 30 chr17 84293016 84293148 -5211405 + MLT1D LTR MaLR 1 130 -375 918 219 170 41 chr17 84293381 84293723 -5210830 + MLT1D LTR MaLR 120 505 0 230 325 25 0 chr17 84293838 84293918 -5210635 - MIR SINE MIR -108 100 19 300 344 45 32 chr17 84294259 84294413 -5210140 + MIR SINE MIR 106 261 -1 378 184 0 0 chr17 84294413 84294489 -5210064 + (ATG)n Simple_repeat Simple_repeat 1 76 0 * 932 151 8 16 chr17 84294475 84294731 -5209822 + (ATGGTG)n Simple_repeat Simple_repeat 1 253 0 2425 67 0 6 chr17 84494817 84495130 -5009423 + AluY SINE Alu 1 311 0 229 246 14 0 chr17 84495136 84495205 -5009348 - L1MC4 LINE L1 -41 8001 7932 3939 151 33 57 chr17 84495301 84495933 -5008620 - L1MB3 LINE L1 -19 6164 5553 2055 104 7 7 chr17 84495933 84496220 -5008333 + AluSx SINE Alu 7 293 -19 3939 151 33 57 chr17 84496220 84496355 -5008198 - L1MB3 LINE L1 -630 5553 5416 1193 139 8 33 chr17 84496438 84496683 -5007870 + L1MB3 LINE L1 5669 5907 -276 838 180 22 22 chr17 84496957 84497140 -5007413 - AluSg/x SINE Alu -1 309 127 1374 206 14 14 chr17 84497320 84497616 -5006937 - AluSx SINE Alu -16 296 1 1906 139 7 3 chr17 84497629 84497917 -5006636 - AluSx SINE Alu -23 289 1 233 167 0 0 chr17 84498060 84498096 -5006457 + MIR SINE MIR 116 151 -111 2117 82 0 76 chr17 84498451 84498812 -5005741 - AluSg SINE Alu 0 310 1 387 197 26 99 chr17 84498812 84498934 -5005619 - L1MB8 LINE L1 -4 6174 6064 2307 91 13 0 chr17 84498934 84499243 -5005310 - AluSp SINE Alu 0 313 1 387 197 26 99 chr17 84499243 84499272 -5005281 - L1MB8 LINE L1 -114 6064 6034 1121 217 12 0 chr17 84499583 84499836 -5004717 + MER58B DNA MER1_type 86 341 0 2175 114 0 0 chr17 84500127 84500426 -5004127 + AluSx SINE Alu 1 299 -13 665 110 0 0 chr17 84500435 84500526 -5004027 + L1PA11 LINE L1 6072 6162 -12 870 99 73 151 chr17 84500700 84500932 -5003621 - Tigger7 DNA MER2_type 0 2487 2280 2087 96 0 4 chr17 84500932 84501228 -5003325 + AluSq SINE Alu 12 306 0 870 99 73 151 chr17 84501228 84501266 -5003287 - Tigger7 DNA MER2_type -207 2280 2241 587 174 0 33 chr17 84501269 84501390 -5003163 + AluSq/x SINE Alu 1 117 -195 200 254 0 0 chr17 84501458 84501521 -5003032 + G-rich Low_complexity Low_complexity 1 63 0 230 117 23 62 chr17 84501529 84501657 -5002896 + (CGGGG)n Simple_repeat Simple_repeat 3 125 0 385 86 0 0 chr17 84501910 84501968 -5002585 + MER53 DNA DNA 132 189 0 1979 111 31 7 chr17 84501994 84502283 -5002270 - AluSq SINE Alu -17 296 1 864 198 6 135 chr17 84503088 84503234 -5001319 + L1MB7 LINE L1 5747 5910 -274 2159 106 3 7 chr17 84503234 84503535 -5001018 + AluSg SINE Alu 1 300 -10 864 198 6 135 chr17 84503535 84503607 -5000946 + L1MB7 LINE L1 5910 5914 -270 1974 159 0 10 chr17 84503607 84503921 -5000632 + AluJo SINE Alu 1 311 -1 864 198 6 135 chr17 84503921 84504020 -5000533 + L1MB7 LINE L1 5914 6024 -160 608 232 27 32 chr17 84504023 84504208 -5000345 - AluSg/x SINE Alu -6 306 123 21 36 0 0 chr17 84504208 84504236 -5000317 + GC_rich Low_complexity Low_complexity 1 28 0 203 330 19 28 chr17 84504339 84504445 -5000108 + CT-rich Low_complexity Low_complexity 3 107 0 * 207 204 45 0 chr17 84504405 84504449 -5000104 + C-rich Low_complexity Low_complexity 3 48 0 808 198 0 6 chr17 84504579 84504756 -4999797 + AluSp SINE Alu 122 297 -16 1979 142 0 16 chr17 84504767 84505078 -4999475 + AluSx SINE Alu 1 306 -6 646 174 7 7 chr17 84505078 84505222 -4999331 - L1MB3 LINE L1 -154 6029 5886 2366 64 3 3 chr17 84505270 84505565 -4998988 + AluSp SINE Alu 1 295 -18 1764 104 27 57 chr17 84505856 84506154 -4998399 + AluSx SINE Alu 12 300 -12 1055 223 5 5 chr17 84506173 84506265 -4998288 - AluJo SINE Alu -88 224 133 2155 87 3 26 chr17 84506265 84506575 -4997978 - AluY SINE Alu -8 303 1 1055 223 5 5 chr17 84506575 84506706 -4997847 - AluJo SINE Alu -178 134 1 1277 172 4 8 chr17 84506872 84507110 -4997443 - AluY SINE Alu -2 309 73 26 30 0 0 chr17 84507123 84507156 -4997397 + GC_rich Low_complexity Low_complexity 1 33 0 1530 192 17 10 chr17 84507443 84507740 -4996813 + AluSx SINE Alu 1 299 -3 788 133 0 73 chr17 84507756 84507906 -4996647 + FLAM_C SINE Alu 5 143 0 766 141 30 219 chr17 84508106 84508376 -4996177 + MER20 DNA MER1_type 1 219 0 2061 108 7 7 chr17 84508495 84508805 -4995748 - AluSp SINE Alu 0 313 5 2087 123 3 0 chr17 84508812 84509104 -4995449 - AluSx SINE Alu -19 293 1 1932 154 3 10 chr17 84509146 84509458 -4995095 + AluSx SINE Alu 1 310 -2 2000 117 3 3 chr17 84509873 84510173 -4994380 - AluSx SINE Alu -12 300 1 1921 133 3 7 chr17 84510269 84510569 -4993984 - AluSx SINE Alu -3 309 11 453 284 0 0 chr17 84510612 84510739 -4993814 + FLAM_C SINE Alu 10 136 -7 1211 278 0 7 chr17 84510741 84511043 -4993510 + AluSg SINE Alu 1 300 0 396 348 115 15 chr17 84511057 84511354 -4993199 + HAL1 LINE L1 1023 1301 -1206 875 309 0 0 chr17 84511588 84511886 -4992667 + AluSx SINE Alu 5 302 0 273 298 53 9 chr17 84511906 84512020 -4992533 - MIR SINE MIR -50 212 94 1495 137 61 22 chr17 84512022 84512299 -4992254 + AluJo SINE Alu 7 294 -18 191 328 16 0 chr17 84513680 84513741 -4990812 - L2 LINE L2 -2 3311 3250 1658 113 0 13 chr17 84513976 84514214 -4990339 + AluSg/x SINE Alu 72 306 -6 1001 188 32 9 chr17 84514252 84514470 -4990083 - AluJo SINE Alu -1 311 89 224 254 34 0 chr17 84514483 84514542 -4990011 + CT-rich Low_complexity Low_complexity 4 64 0 916 153 0 0 chr17 84514714 84514864 -4989689 + AluSg/x SINE Alu 142 291 -21 1375 165 55 12 chr17 84514878 84515132 -4989421 - AluSx SINE Alu -16 296 32 2087 114 10 0 chr17 84515879 84516168 -4988385 + AluSx SINE Alu 6 297 -15 2302 91 10 0 chr17 84516440 84516747 -4987806 + AluSg SINE Alu 1 310 0 1846 158 17 7 chr17 84516748 84517045 -4987508 + AluSq SINE Alu 2 301 -12 2306 86 0 7 chr17 84517047 84517350 -4987203 + AluSq SINE Alu 3 303 -10 272 255 20 51 chr17 84517432 84517530 -4987023 + MIR SINE MIR 46 140 -122 2051 102 0 40 chr17 84517542 84517677 -4986876 + AluSx SINE Alu 1 140 -172 2208 83 0 7 chr17 84517677 84517979 -4986574 + AluY SINE Alu 1 300 -11 2051 102 0 40 chr17 84517979 84518147 -4986406 + AluSx SINE Alu 140 292 -20 2053 92 43 30 chr17 84518586 84518890 -4985663 - AluSg SINE Alu -1 309 2 335 70 0 0 chr17 84519853 84519896 -4984657 + (TCCCC)n Simple_repeat Simple_repeat 1 43 0 414 326 44 11 chr17 84520578 84520759 -4983794 + L1MC/D LINE L1 5579 5765 -2043 563 162 59 28 chr17 84520768 84520910 -4983643 + MLT1B LTR MaLR 263 390 0 304 333 52 16 chr17 84520956 84521148 -4983405 - L2 LINE L2 -646 2668 2470 1197 169 15 115 chr17 84521148 84521291 -4983262 + AluJo SINE Alu 5 161 -141 1618 166 0 8 chr17 84521291 84521550 -4983003 + AluJb SINE Alu 37 293 -19 1197 169 15 115 chr17 84521550 84521627 -4982926 + AluJo SINE Alu 161 184 -118 1478 127 0 47 chr17 84521627 84521863 -4982690 + AluSx SINE Alu 1 225 -87 1197 169 15 115 chr17 84521863 84521972 -4982581 + AluJo SINE Alu 184 302 0 894 142 0 7 chr17 84521986 84522158 -4982395 + AluSg/x SINE Alu 146 316 0 307 318 65 0 chr17 84522261 84522368 -4982185 - L1MC4a LINE L1 -1870 5938 5825 2040 103 10 19 chr17 84522683 84522995 -4981558 - AluSg SINE Alu -1 309 1 252 77 0 0 chr17 84523454 84523493 -4981060 + (GTTTG)n Simple_repeat Simple_repeat 1 39 0 1950 90 4 11 chr17 84523493 84523759 -4980794 - AluSx SINE Alu -27 285 22 791 239 113 74 chr17 84523775 84524155 -4980398 + MLT1C LTR MaLR 73 467 0 836 266 5 25 chr17 84524315 84524518 -4980035 - AluSg/x SINE Alu -5 307 109 564 231 0 0 chr17 84524515 84524632 -4979921 + AluSg/x SINE Alu 177 293 -17 * 1705 158 7 43 chr17 84524664 84524968 -4979585 + AluSx SINE Alu 1 293 -19 1957 101 0 7 chr17 84525062 84525340 -4979213 - AluY SINE Alu -18 293 18 544 129 0 136 chr17 84525611 84525751 -4978802 + AluSg/x SINE Alu 189 309 0 254 250 13 13 chr17 84526069 84526145 -4978408 + MLT1H LTR MaLR 457 532 -17 2183 126 0 3 chr17 84526384 84526693 -4977860 - AluSx SINE Alu -4 308 1 3443 116 83 15 chr17 84527558 84528085 -4976468 + LTR6A LTR ERV1 1 563 -1 235 275 67 45 chr17 84528091 84528269 -4976284 - LTR33 LTR ERVL -307 214 33 2296 96 0 3 chr17 84528827 84529129 -4975424 + AluSx SINE Alu 1 301 -11 285 243 165 19 chr17 84529190 84529293 -4975260 - L2 LINE L2 0 3272 3155 184 234 0 21 chr17 84529282 84529329 -4975224 + MIR SINE MIR 180 225 -37 * 191 224 84 75 chr17 84530178 84530285 -4974268 - MIR SINE MIR -109 153 46 356 326 113 62 chr17 84534017 84534308 -4970245 - L2 LINE L2 -2 3270 2965 1937 112 3 11 chr17 84535018 84535334 -4969219 + AluSp SINE Alu 1 314 0 629 224 109 35 chr17 84535561 84535735 -4968818 + AluSg/x SINE Alu 122 308 -4 316 255 137 26 chr17 84535780 84535933 -4968620 - Charlie7 DNA MER1_type -7 2605 2436 2372 62 0 16 chr17 84536155 84536462 -4968091 - AluY SINE Alu -9 302 1 2133 126 10 0 chr17 84537718 84538027 -4966526 + AluSx SINE Alu 1 312 0 1707 165 37 0 chr17 84538053 84538350 -4966203 + AluJo SINE Alu 1 308 -4 270 161 36 0 chr17 84538371 84538427 -4966126 - Alu SINE Alu -1 301 244 884 239 0 0 chr17 84538774 84538979 -4965574 + L1PA13 LINE L1 5958 6162 -1 2133 87 13 20 chr17 84538980 84539280 -4965273 + AluSx SINE Alu 1 298 -14 247 308 90 0 chr17 84541477 84541555 -4962998 - L2 LINE L2 0 3313 3229 335 269 50 0 chr17 84541760 84541879 -4962674 - L2 LINE L2 -653 2661 2537 2580 148 105 17 chr17 84541883 84542466 -4962087 - LTR48B LTR ERV1 -10 634 1 979 165 0 45 chr17 84543522 84543698 -4960855 + AluJb SINE Alu 135 302 -10 1960 86 63 40 chr17 84543701 84543786 -4960767 + AluSc SINE Alu 1 83 -226 2328 65 0 36 chr17 84543786 84544094 -4960459 + AluY SINE Alu 1 297 -14 1960 86 63 40 chr17 84544094 84544310 -4960243 + AluSc SINE Alu 83 309 0 453 199 0 64 chr17 84544371 84544512 -4960041 + MER53 DNA DNA 2 133 -56 1297 177 12 24 chr17 84544512 84544761 -4959792 + AluSc SINE Alu 1 246 -63 1147 128 0 6 chr17 84544911 84545091 -4959462 - AluSx SINE Alu -125 187 9 1939 143 0 7 chr17 84545109 84545410 -4959143 - AluSg SINE Alu -11 299 1 2263 48 0 17 chr17 84545552 84545867 -4958686 + AluY SINE Alu 1 310 0 999 154 6 24 chr17 84545907 84546076 -4958477 + FRAM SINE Alu 1 166 0 2196 92 10 10 chr17 84546082 84546386 -4958167 + AluSx SINE Alu 1 304 -8 592 278 107 32 chr17 84546387 84546872 -4957681 + L1ME3A LINE L1 5422 5949 -221 739 167 0 8 chr17 84546955 84547075 -4957478 + FLAM_C SINE Alu 1 119 -14 384 284 51 89 chr17 84547097 84547273 -4957280 + L1MCa LINE L1 1995 2176 -4266 291 71 0 0 chr17 84547280 84547322 -4957231 + (TG)n Simple_repeat Simple_repeat 1 42 0 2081 94 0 7 chr17 84547322 84547601 -4956952 - AluSx SINE Alu -29 283 5 384 284 51 89 chr17 84547601 84547726 -4956827 + L1MCa LINE L1 2176 6436 -6 378 366 32 50 chr17 84548878 84549340 -4955213 - L2 LINE L2 -2 3270 2817 399 171 0 0 chr17 84549710 84549786 -4954767 + (CA)n Simple_repeat Simple_repeat 1 76 0 197 309 191 34 chr17 84550610 84550930 -4953623 + L2 LINE L2 2870 3239 -33 1683 182 10 10 chr17 84551216 84551512 -4953041 + AluJo SINE Alu 1 296 -16 373 279 199 7 chr17 84551538 84551674 -4952879 - MIR SINE MIR -24 238 77 622 317 66 8 chr17 84551912 84552155 -4952398 + MIR SINE MIR 2 258 -4 2017 82 0 41 chr17 84552169 84552460 -4952093 + AluSx SINE Alu 1 279 -33 405 0 0 0 chr17 84552460 84552505 -4952048 + (CA)n Simple_repeat Simple_repeat 1 45 0 988 46 77 8 chr17 84553116 84553246 -4951307 - MER85 DNA T2_type 0 139 1 2343 87 0 3 chr17 84553326 84553636 -4950917 + AluSg SINE Alu 1 309 -1 320 368 103 0 chr17 84553731 84553867 -4950686 - MIR SINE MIR -85 177 28 267 250 40 0 chr17 84555430 84555530 -4949023 + LTR33 LTR ERVL 411 514 -7 312 393 81 0 chr17 84555608 84555781 -4948772 + MER91B DNA MER1_type 3 189 -1 350 360 65 19 chr17 84557046 84557257 -4947296 + MIR SINE MIR 36 257 -5 411 232 161 0 chr17 84558280 84558392 -4946161 - MIR SINE MIR -70 192 63 2121 99 0 25 chr17 84559280 84559594 -4944959 + AluSx SINE Alu 1 306 -6 951 153 5 26 chr17 84559691 84559880 -4944673 + AluJb SINE Alu 119 303 -9 183 42 0 0 chr17 84560121 84560145 -4944408 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2080 127 0 16 chr17 84560464 84560771 -4943782 + AluSx SINE Alu 1 302 -10 1035 122 7 0 chr17 84560799 84560946 -4943607 + FRAM SINE Alu 11 158 -18 2148 102 7 3 chr17 84560952 84561245 -4943308 + AluSx SINE Alu 5 298 -14 376 251 57 12 chr17 84561251 84561270 -4943283 + L1ME LINE L1 774 791 -5289 1722 161 23 17 chr17 84561270 84561569 -4942984 + AluJb SINE Alu 1 301 -11 376 251 57 12 chr17 84561569 84561853 -4942700 + L1ME LINE L1 791 3216 -2864 2198 91 3 3 chr17 84561862 84562182 -4942371 + AluSp SINE Alu 1 320 0 405 278 113 9 chr17 84562187 84562210 -4942343 - L1ME4a LINE L1 -48 6073 6054 2064 121 3 13 chr17 84562210 84562525 -4942028 + AluSx SINE Alu 1 312 0 405 278 113 9 chr17 84562525 84562616 -4941937 - L1ME4a LINE L1 -67 6054 5947 402 21 0 0 chr17 84562622 84562669 -4941884 + (TG)n Simple_repeat Simple_repeat 2 48 0 2176 118 3 13 chr17 84562889 84563203 -4941350 + AluSp SINE Alu 1 311 -2 2106 99 0 14 chr17 84563435 84563729 -4940824 + AluSp SINE Alu 18 307 -6 1597 226 104 63 chr17 84563805 84563909 -4940644 - MLT1F LTR MaLR 0 542 444 1528 137 10 80 chr17 84563909 84564060 -4940493 + AluJb SINE Alu 1 120 -192 2116 121 0 9 chr17 84564060 84564375 -4940178 + AluSx SINE Alu 1 312 0 1528 137 10 80 chr17 84564375 84564536 -4940017 + AluJb SINE Alu 120 291 -21 1597 226 104 63 chr17 84564536 84564952 -4939601 - MLT1F LTR MaLR -98 444 1 298 322 48 13 chr17 84567460 84567616 -4936937 + MIR SINE MIR 20 182 -65 324 255 69 0 chr17 84567761 84567863 -4936690 + MIR3 SINE MIR 61 169 -39 396 171 0 0 chr17 84568720 84568802 -4935751 + (CA)n Simple_repeat Simple_repeat 1 82 0 1728 117 49 73 chr17 84571273 84571468 -4933085 + MSTA LTR MaLR 1 199 -229 2321 83 0 3 chr17 84571468 84571769 -4932784 + AluY SINE Alu 1 300 -11 1728 117 49 73 chr17 84571769 84571782 -4932771 + MSTA LTR MaLR 199 211 -217 2136 107 3 10 chr17 84571782 84572081 -4932472 + AluSp SINE Alu 1 297 -16 1728 117 49 73 chr17 84572081 84572256 -4932297 + MSTA LTR MaLR 211 376 -52 1106 105 0 0 chr17 84572256 84572399 -4932154 - AluSq/x SINE Alu -169 143 1 371 100 43 14 chr17 84572399 84572469 -4932084 + MSTA LTR MaLR 357 428 0 2307 57 40 3 chr17 84573663 84573962 -4930591 - AluY SINE Alu -1 310 1 225 271 0 0 chr17 84574361 84574483 -4930070 + (CA)n Simple_repeat Simple_repeat 1 122 0 223 245 0 0 chr17 84574532 84574581 -4929972 + (CA)n Simple_repeat Simple_repeat 1 49 0 256 280 34 17 chr17 84575368 84575486 -4929067 + G-rich Low_complexity Low_complexity 2 121 0 230 350 65 8 chr17 84575643 84575766 -4928787 + MIR SINE MIR 46 175 -87 1271 132 108 84 chr17 84577026 84577313 -4927240 - AluJo SINE Alu -18 294 1 720 185 123 27 chr17 84577379 84577525 -4927028 + AluJb SINE Alu 137 296 -16 2227 98 0 3 chr17 84577525 84577822 -4926731 + AluSx SINE Alu 1 296 -16 2276 88 0 7 chr17 84577856 84578153 -4926400 + AluSg SINE Alu 1 295 -15 2198 83 0 10 chr17 84578187 84578488 -4926065 + AluSg SINE Alu 1 298 -12 1247 197 4 36 chr17 84578960 84579234 -4925319 - AluJb SINE Alu -7 305 41 1955 142 16 7 chr17 84579237 84579546 -4925007 - AluSx SINE Alu 0 312 1 195 226 0 57 chr17 84580771 84580824 -4923729 + L2 LINE L2 3264 3313 0 304 234 67 5 chr17 84581068 84581182 -4923371 + L1MD2 LINE L1 6257 8041 -1 347 222 86 0 chr17 84581203 84581284 -4923269 + L3 LINE CR1 1335 1422 -155 432 329 21 0 chr17 84581342 84581482 -4923071 + MIR SINE MIR 1 143 -119 1627 172 19 23 chr17 84581488 84581796 -4922757 + AluJo SINE Alu 1 307 -5 208 135 0 0 chr17 84583360 84583397 -4921156 + (A)n Simple_repeat Simple_repeat 1 37 0 480 302 38 72 chr17 84584184 84584449 -4920104 - MIR SINE MIR 0 262 7 2153 87 3 0 chr17 84584769 84585055 -4919498 - AluSp SINE Alu -21 292 6 59 49 0 0 chr17 84585118 84585200 -4919353 + AT_rich Low_complexity Low_complexity 1 82 0 1817 146 3 20 chr17 84585232 84585533 -4919020 - AluJb SINE Alu -16 296 1 327 84 10 0 chr17 84585797 84585858 -4918695 + Alu SINE Alu 1 43 -260 1150 74 0 0 chr17 84585877 84586026 -4918527 + AluYa5 SINE Alu 153 301 -10 910 134 18 24 chr17 84586036 84586200 -4918353 + FRAM SINE Alu 1 163 -13 962 151 7 0 chr17 84586585 84586737 -4917816 + FRAM SINE Alu 15 167 -9 2478 30 0 20 chr17 84587014 84587318 -4917235 - AluY SINE Alu -13 298 1 717 216 93 39 chr17 84587616 84587820 -4916733 + MER58C DNA MER1_type 1 215 0 2065 136 0 0 chr17 84587983 84588278 -4916275 + AluSx SINE Alu 1 295 -17 182 342 79 0 chr17 84588408 84588484 -4916069 - MIR SINE MIR -106 102 21 238 158 58 194 chr17 84588524 84588563 -4915990 + MER53 DNA DNA 1 44 -145 2172 110 0 13 chr17 84588563 84588871 -4915682 + AluSx SINE Alu 1 304 -8 238 158 58 194 chr17 84588871 84588886 -4915667 + MER53 DNA DNA 44 59 -130 2159 85 11 3 chr17 84588886 84589169 -4915384 + AluSg SINE Alu 7 291 -19 279 0 0 0 chr17 84589173 84589204 -4915349 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 238 158 58 194 chr17 84589204 84589282 -4915271 + MER53 DNA DNA 62 120 -69 1584 158 53 11 chr17 84589360 84589481 -4915072 + AluJo SINE Alu 1 115 -197 306 0 0 0 chr17 84589481 84589515 -4915038 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1584 158 53 11 chr17 84589515 84589677 -4914876 + AluJo SINE Alu 115 296 -16 2363 68 0 13 chr17 84589678 84589989 -4914564 + AluY SINE Alu 1 307 -4 2070 130 0 7 chr17 84589999 84590299 -4914254 + AluSx SINE Alu 1 298 -14 2201 104 7 3 chr17 84590299 84590597 -4913956 + AluSq SINE Alu 1 299 -14 2605 43 0 0 chr17 84591208 84591513 -4913040 - AluY SINE Alu -6 305 1 2120 75 0 11 chr17 84592033 84592314 -4912239 - AluSx SINE Alu 0 312 35 225 246 0 0 chr17 84592315 84592372 -4912181 + L1ME1 LINE L1 6106 6162 -4 2171 111 0 0 chr17 84593861 84594158 -4910395 + AluSq SINE Alu 1 297 -16 207 0 0 0 chr17 84594655 84594678 -4909875 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2078 117 0 16 chr17 84594731 84595047 -4909506 - AluSx SINE Alu -1 311 1 359 212 45 30 chr17 84595049 84595181 -4909372 - L1MC4 LINE L1 -16 8026 7893 209 173 25 37 chr17 84595183 84595264 -4909289 + CT-rich Low_complexity Low_complexity 1 80 0 337 203 250 27 chr17 84595349 84595497 -4909056 - L1MC4 LINE L1 -124 7918 7738 2108 90 3 32 chr17 84595668 84595980 -4908573 - AluSg1 SINE Alu -6 303 1 2292 90 6 10 chr17 84596762 84597073 -4907480 + AluSq SINE Alu 1 310 -3 * 2481 58 0 6 chr17 84597072 84597385 -4907168 + AluY SINE Alu 1 311 0 1338 184 8 26 chr17 84597755 84597879 -4906674 + AluJb SINE Alu 21 146 -166 2224 100 0 3 chr17 84597879 84598179 -4906374 + AluSq SINE Alu 1 299 -14 1338 184 8 26 chr17 84598179 84598321 -4906232 + AluJb SINE Alu 146 282 -30 1360 160 111 35 chr17 84598895 84599183 -4905370 - AluJo SINE Alu -2 310 1 1761 154 0 32 chr17 84599333 84599644 -4904909 + AluSx SINE Alu 2 302 -10 957 214 18 40 chr17 84600292 84600516 -4904037 + MER20 DNA MER1_type 1 219 0 1550 180 26 29 chr17 84601452 84601763 -4902790 - AluJo SINE Alu -2 310 1 248 167 91 15 chr17 84601840 84601906 -4902647 + ORSL DNA AcHobo 166 236 -39 1549 140 0 47 chr17 84602046 84602324 -4902229 + AluSx SINE Alu 37 301 -11 2071 110 19 19 chr17 84602786 84603094 -4901459 - AluSp SINE Alu -5 308 1 1662 159 17 10 chr17 84603130 84603420 -4901133 + AluJb SINE Alu 1 292 -20 2044 107 35 3 chr17 84603634 84603923 -4900630 - AluSx SINE Alu -14 298 1 1938 131 17 0 chr17 84603923 84604221 -4900332 - AluSx SINE Alu -9 303 1 343 320 130 58 chr17 84604364 84604742 -4899811 - L1MEd LINE L1 -4875 1244 840 392 298 17 57 chr17 84604917 84605106 -4899447 - MLT1J2 LTR MaLR -184 262 78 2080 114 7 7 chr17 84605106 84605405 -4899148 - AluSx SINE Alu -13 299 1 392 298 17 57 chr17 84605405 84605478 -4899075 - MLT1J2 LTR MaLR -368 78 4 1490 58 0 34 chr17 84606338 84606564 -4897989 + AluSp SINE Alu 84 302 0 2242 107 0 0 chr17 84607033 84607331 -4897222 + AluSx SINE Alu 1 298 -14 2390 48 0 10 chr17 84607336 84607631 -4896922 + AluY SINE Alu 6 297 -14 1450 145 102 13 chr17 84607671 84607974 -4896579 - MER46B DNA MER2_type 0 236 32 438 167 0 0 chr17 84608022 84608088 -4896465 + AluS SINE Alu 6 71 -241 448 210 105 62 chr17 84608297 84608459 -4896094 + MER20 DNA MER1_type 26 194 -25 251 206 52 52 chr17 84609190 84609287 -4895266 - MIR SINE MIR -122 140 44 1986 130 13 7 chr17 84611228 84611527 -4893026 - AluSx SINE Alu -11 301 1 2045 88 49 0 chr17 84614539 84614823 -4889730 - AluSq SINE Alu -15 298 1 22 70 0 0 chr17 84616403 84616446 -4888107 + GC_rich Low_complexity Low_complexity 1 43 0 201 74 0 0 chr17 84616639 84616666 -4887887 + (CCG)n Simple_repeat Simple_repeat 3 29 0 2448 63 0 9 chr17 84617217 84617532 -4887021 + AluSp SINE Alu 1 312 -1 1994 104 0 39 chr17 84617543 84617891 -4886662 + AluSx SINE Alu 1 312 0 847 218 0 18 chr17 84617892 84618041 -4886512 + AluY SINE Alu 133 280 -31 2243 69 45 0 chr17 84618041 84618329 -4886224 + AluSc SINE Alu 1 301 -8 847 218 0 18 chr17 84618329 84618344 -4886209 + AluY SINE Alu 280 294 -17 444 259 31 106 chr17 84618959 84619279 -4885274 - L1MA9 LINE L1 -30 6282 5987 2275 83 3 0 chr17 84619457 84619747 -4884806 - AluSp SINE Alu -22 291 1 278 241 0 0 chr17 84619837 84619891 -4884662 - MIR SINE MIR -62 146 93 2053 136 3 3 chr17 84621385 84621694 -4882859 - AluJb SINE Alu -3 309 1 309 137 32 42 chr17 84621722 84621817 -4882736 - MER53 DNA DNA -1 188 95 996 161 25 0 chr17 84622018 84622179 -4882374 - FRAM SINE Alu -19 157 1 1717 103 4 12 chr17 84622194 84622446 -4882107 + AluSq SINE Alu 1 250 -63 1203 173 33 103 chr17 84622569 84622904 -4881649 + AluJo SINE Alu 5 318 0 314 276 46 59 chr17 84623237 84623575 -4880978 + MLT1C LTR MaLR 2 330 -60 2177 119 3 0 chr17 84623612 84623922 -4880631 - AluSx SINE Alu -1 311 1 2215 100 3 0 chr17 84623922 84624223 -4880330 - AluSx SINE Alu -10 302 1 734 306 100 48 chr17 84624223 84624626 -4879927 + L2 LINE L2 259 639 -2675 1489 173 3 79 chr17 84624626 84624758 -4879795 + AluJo SINE Alu 6 146 -166 1907 150 7 0 chr17 84624758 84625051 -4879502 + AluJb SINE Alu 1 295 -17 2233 82 0 7 chr17 84625058 84625352 -4879201 + AluSc SINE Alu 3 294 -15 1489 173 3 79 chr17 84625352 84625540 -4879013 + AluJo SINE Alu 152 309 -3 734 306 100 48 chr17 84625540 84625594 -4878959 + L2 LINE L2 639 740 -2574 2406 80 0 0 chr17 84625703 84626015 -4878538 - AluSx SINE Alu 0 312 1 183 42 0 0 chr17 84626040 84626064 -4878489 + (CATCC)n Simple_repeat Simple_repeat 1 24 0 798 161 21 21 chr17 84626547 84626690 -4877863 - AluJb SINE Alu -39 273 131 705 189 0 16 chr17 84626707 84626829 -4877724 + AluSg/x SINE Alu 123 242 -67 * 756 165 8 8 chr17 84626827 84626954 -4877599 - FLAM_C SINE Alu -7 136 10 436 239 111 8 chr17 84626989 84627106 -4877447 + L2 LINE L2 3185 3313 0 185 286 100 0 chr17 84627996 84628066 -4876487 + L2 LINE L2 10 86 -3228 299 303 35 49 chr17 84628365 84628507 -4876046 - MIR3 SINE MIR -47 161 22 2181 95 27 0 chr17 84628978 84629274 -4875279 + AluSx SINE Alu 2 305 -7 264 347 56 7 chr17 84629274 84629418 -4875135 + MLT1D LTR MaLR 32 182 -323 2016 125 0 22 chr17 84631782 84632101 -4872452 + AluSx SINE Alu 1 312 0 497 160 21 2 chr17 84632271 84632372 -4872181 - MER5A DNA MER1_type -78 105 11 411 195 156 45 chr17 84632751 84632905 -4871648 + MER5B DNA MER1_type 6 176 -2 283 231 0 0 chr17 84633371 84633436 -4871117 + MIR SINE MIR 29 93 -169 265 222 111 11 chr17 84633557 84633647 -4870906 - Charlie7 DNA MER1_type -1 2611 2513 225 157 34 11 chr17 84633699 84633788 -4870765 - Charlie7 DNA MER1_type -100 2512 2422 1458 168 4 8 chr17 84634725 84634981 -4869572 - AluJo SINE Alu -12 300 46 2135 92 3 30 chr17 84635010 84635313 -4869240 - AluSq SINE Alu -16 297 3 1171 152 5 38 chr17 84635313 84635458 -4869095 - AluSx SINE Alu -174 138 1 589 134 25 50 chr17 84635478 84635597 -4868956 - AluJo SINE Alu -176 136 21 1326 138 198 8 chr17 84638033 84638286 -4866267 - AluSg1 SINE Alu -8 301 1 1716 157 13 36 chr17 84638578 84638883 -4865670 - AluJb SINE Alu -12 300 3 2205 106 13 0 chr17 84638988 84639290 -4865263 - AluSx SINE Alu -6 306 1 276 59 176 0 chr17 84639515 84639566 -4864987 + FRAM/FAM SINE Alu 24 83 -83 236 323 42 0 chr17 84639605 84639701 -4864852 + MIR SINE MIR 86 185 -77 369 213 37 28 chr17 84640378 84640486 -4864067 + MIR SINE MIR 85 193 -69 241 358 0 0 chr17 84640746 84640911 -4863642 + (CA)n Simple_repeat Simple_repeat 1 165 0 427 270 135 12 chr17 84641695 84641858 -4862695 - MIR SINE MIR -33 229 47 194 241 103 0 chr17 84643711 84643797 -4860756 + MIR SINE MIR 48 146 -62 330 231 37 56 chr17 84645609 84645717 -4858836 + MIR SINE MIR 66 171 -91 35 41 0 0 chr17 84646176 84646225 -4858328 + GC_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 84646240 84646262 -4858291 + GC_rich Low_complexity Low_complexity 1 22 0 206 206 16 32 chr17 84646698 84646761 -4857792 + G-rich Low_complexity Low_complexity 2 63 0 189 121 0 0 chr17 84649129 84649162 -4855391 + (CCCGG)n Simple_repeat Simple_repeat 5 37 0 260 296 12 0 chr17 84651103 84651184 -4853369 + (TCCA)n Simple_repeat Simple_repeat 3 84 0 614 213 0 13 chr17 84651190 84651428 -4853125 + (CCCA)n Simple_repeat Simple_repeat 1 234 0 815 190 0 7 chr17 84651428 84651728 -4852825 + (TCCA)n Simple_repeat Simple_repeat 1 297 0 316 323 30 0 chr17 84651886 84652019 -4852534 - L2 LINE L2 -215 3057 2921 2255 105 0 0 chr17 84654598 84654902 -4849651 + AluSx SINE Alu 1 304 -8 29 47 0 0 chr17 84655056 84655099 -4849454 + AT_rich Low_complexity Low_complexity 1 43 0 1921 133 0 42 chr17 84655107 84655415 -4849138 + AluJb SINE Alu 1 295 -17 2313 57 3 3 chr17 84656478 84656785 -4847768 - AluY SINE Alu 0 307 1 1799 136 24 3 chr17 84658169 84658456 -4846097 - AluSx SINE Alu -19 293 1 1918 137 20 7 chr17 84658485 84658784 -4845769 + AluJo SINE Alu 1 303 -9 1355 114 139 13 chr17 84658786 84659023 -4845530 + AluSc SINE Alu 3 269 -40 306 249 0 124 chr17 84659141 84659479 -4845074 + C-rich Low_complexity Low_complexity 1 295 0 306 246 0 126 chr17 84659498 84659689 -4844864 + C-rich Low_complexity Low_complexity 2 168 0 306 246 0 126 chr17 84659708 84659899 -4844654 + C-rich Low_complexity Low_complexity 2 168 0 1489 215 57 46 chr17 84661048 84661523 -4843030 + MLT1D LTR MaLR 23 502 -3 382 200 118 9 chr17 84661540 84661650 -4842903 - MIR SINE MIR -108 154 33 838 258 48 11 chr17 84664271 84664539 -4840014 + MLT2C1 LTR ERVL 1 278 -119 203 245 0 20 chr17 84664910 84664959 -4839594 - MER5B DNA MER1_type 0 178 131 560 215 117 37 chr17 84664959 84665056 -4839497 + AluJo SINE Alu 121 238 -74 1388 143 167 0 chr17 84665056 84665308 -4839245 - AluSq SINE Alu -16 297 4 560 215 117 37 chr17 84665308 84665373 -4839180 + AluJo SINE Alu 238 296 -16 341 204 28 162 chr17 84665374 84665454 -4839099 - MER5B DNA MER1_type -55 123 69 2236 100 3 0 chr17 84665454 84665753 -4838800 - AluSp SINE Alu -13 300 1 341 204 28 162 chr17 84665753 84665814 -4838739 - MER5B DNA MER1_type -109 69 1 791 151 16 0 chr17 84665897 84666023 -4838530 - FRAM SINE Alu -18 158 31 1177 147 21 50 chr17 84666455 84666693 -4837860 + AluJb SINE Alu 70 300 -12 32 26 0 0 chr17 84666719 84666758 -4837795 + AT_rich Low_complexity Low_complexity 1 39 0 235 353 66 0 chr17 84666863 84666985 -4837568 + L2 LINE L2 2920 3049 -223 221 152 15 30 chr17 84668252 84668318 -4836235 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 189 94 0 0 chr17 84668637 84668669 -4835884 + (T)n Simple_repeat Simple_repeat 1 32 0 387 298 146 0 chr17 84668859 84669030 -4835523 - L1MDa LINE L1 -3941 2599 2404 28 48 0 0 chr17 84669274 84669316 -4835237 + AT_rich Low_complexity Low_complexity 1 42 0 183 80 0 0 chr17 84669881 84669906 -4834647 + (CA)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr17 84670071 84670099 -4834454 + AT_rich Low_complexity Low_complexity 1 28 0 1529 165 12 40 chr17 84671540 84671867 -4832686 + MLT1B LTR MaLR 1 318 -72 804 107 9 0 chr17 84672573 84672685 -4831868 - FLAM_C SINE Alu -30 113 1 462 78 0 0 chr17 84673510 84673574 -4830979 + THE1B LTR MaLR 1 64 -300 3105 93 37 10 chr17 84673579 84674062 -4830491 + MER9 LTR ERVK 16 511 0 9712 93 41 5 chr17 84674063 84674466 -4830087 + THE1B-int LTR MaLR 53 440 -1140 2371 100 0 0 chr17 84674466 84674776 -4829777 + AluSq SINE Alu 1 310 -3 9712 93 41 5 chr17 84674776 84675847 -4828706 + THE1B-int LTR MaLR 440 1580 0 409 20 0 0 chr17 84675847 84675898 -4828655 + THE1B LTR MaLR 1 51 -313 728 183 0 0 chr17 84676018 84676133 -4828420 - AluJb SINE Alu -187 125 11 385 310 70 14 chr17 84676143 84676285 -4828268 - MIR SINE MIR -107 155 6 347 347 29 75 chr17 84676412 84676512 -4828041 + MIR SINE MIR 1 104 -158 2057 137 7 0 chr17 84676512 84676812 -4827741 - AluSx SINE Alu -10 302 1 347 347 29 75 chr17 84676812 84676933 -4827620 + MIR SINE MIR 104 213 -49 1867 118 29 7 chr17 84676938 84677218 -4827335 - AluSx SINE Alu 0 312 27 236 119 0 0 chr17 84678070 84678112 -4826441 + Alu SINE Alu 254 295 -5 728 183 0 0 chr17 84678113 84678228 -4826325 - AluJb SINE Alu -187 125 11 385 310 70 14 chr17 84678238 84678380 -4826173 - MIR SINE MIR -107 155 6 261 327 4 96 chr17 84678512 84678612 -4825941 + MIR SINE MIR 1 84 -124 1125 264 7 23 chr17 84678612 84678919 -4825634 - AluSx SINE Alu 0 302 1 261 327 4 96 chr17 84678919 84678985 -4825568 + MIR SINE MIR 84 155 -53 1472 125 0 5 chr17 84679110 84679326 -4825227 - AluSx SINE Alu -71 241 27 1313 205 10 24 chr17 84680034 84680331 -4824222 + AluSx SINE Alu 1 293 -9 1957 145 3 0 chr17 84680652 84680962 -4823591 + AluY SINE Alu 1 311 0 2398 54 0 3 chr17 84681436 84681730 -4822823 - AluY SINE Alu -18 293 1 207 100 0 0 chr17 84682119 84682149 -4822404 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 1347 144 0 0 chr17 84682294 84682489 -4822064 + AluSg/x SINE Alu 103 297 -13 1642 107 0 0 chr17 84682492 84682707 -4821846 + AluSq SINE Alu 1 215 -98 2713 204 20 6 chr17 84682738 84683287 -4821266 - L1MB5 LINE L1 -47 6127 5571 381 42 0 0 chr17 84683343 84683391 -4821162 - L1PA15 LINE L1 -21 6144 6097 2297 81 28 0 chr17 84683391 84683676 -4820877 + AluSg SINE Alu 1 293 -17 1019 142 134 23 chr17 84683777 84683948 -4820605 + THE1B LTR MaLR 197 364 0 24 32 0 0 chr17 84683961 84683992 -4820561 + AT_rich Low_complexity Low_complexity 1 31 0 1070 166 23 0 chr17 84683992 84684167 -4820386 - AluJo SINE Alu -50 262 84 874 202 6 6 chr17 84686043 84686211 -4818342 - FAM SINE Alu -7 168 1 221 274 0 0 chr17 84686704 84686766 -4817787 - MER91 DNA MER1_type -78 62 1 1426 205 7 10 chr17 84686843 84687140 -4817413 - L1PA15 LINE L1 0 6165 5870 315 104 0 0 chr17 84687169 84687217 -4817336 + AluSx SINE Alu 1 48 -252 1924 153 0 23 chr17 84687217 84687518 -4817035 - AluJb SINE Alu -18 294 1 2294 109 0 3 chr17 84688540 84688851 -4815702 + AluSx SINE Alu 1 310 -2 1805 111 8 15 chr17 84689053 84689314 -4815239 + AluSx SINE Alu 54 312 0 811 163 82 0 chr17 84690562 84690724 -4813829 - AluJb SINE Alu 0 309 137 1150 71 7 0 chr17 84691982 84692122 -4812431 - AluSp/q SINE Alu -15 298 158 747 276 100 31 chr17 84692944 84693263 -4811290 - MER102b DNA MER1_type 0 341 1 2438 104 0 0 chr17 84694057 84694365 -4810188 + AluSx SINE Alu 1 308 -4 238 206 16 32 chr17 84694492 84694555 -4809998 - MIR SINE MIR -1 261 200 740 205 54 12 chr17 84694555 84694721 -4809832 + FRAM SINE Alu 1 169 -7 335 179 131 0 chr17 84694721 84694805 -4809748 - MIR SINE MIR -55 207 113 621 131 107 25 chr17 84694813 84694935 -4809618 + FLAM_C SINE Alu 11 142 -1 277 316 26 18 chr17 84694935 84695049 -4809504 - MIR SINE MIR -135 127 13 894 131 0 22 chr17 84695907 84696044 -4808509 + FLAM_C SINE Alu 1 134 -9 2506 90 0 0 chr17 84696965 84697275 -4807278 - AluSg SINE Alu 0 310 1 25 51 0 0 chr17 84698146 84698185 -4806368 + AT_rich Low_complexity Low_complexity 1 39 0 297 227 57 43 chr17 84698730 84698871 -4805682 + L2 LINE L2 2563 2705 -609 1022 180 105 15 chr17 84699154 84699354 -4805199 - MER58A DNA MER1_type -3 221 4 398 221 96 0 chr17 84699362 84699466 -4805087 - L2 LINE L2 -11 3302 3189 323 368 23 8 chr17 84699485 84699618 -4804935 + L2 LINE L2 3138 3272 0 3811 124 51 12 chr17 84699891 84700542 -4804011 + L1MA2 LINE L1 5629 6304 0 180 0 0 0 chr17 84700740 84700760 -4803793 + (CAGCC)n Simple_repeat Simple_repeat 3 22 0 564 237 0 0 chr17 84701118 84701291 -4803262 + (CCA)n Simple_repeat Simple_repeat 1 173 0 238 359 77 8 chr17 84701557 84701674 -4802879 - MIR SINE MIR -67 141 17 22 35 0 0 chr17 84703036 84703065 -4801488 + GC_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 84703623 84703647 -4800906 + AT_rich Low_complexity Low_complexity 1 24 0 288 213 93 0 chr17 84705077 84705152 -4799401 + MIR SINE MIR 164 245 -17 419 290 45 45 chr17 84705193 84705277 -4799276 - L1MC/D LINE L1 -2332 5476 5393 2581 42 0 19 chr17 84705277 84705584 -4798969 - AluY SINE Alu -10 301 1 419 290 45 45 chr17 84705584 84705720 -4798833 - L1MC/D LINE L1 -2414 5394 5256 254 274 78 59 chr17 84706366 84706519 -4798034 + L2 LINE L2 2927 3082 -190 2310 114 7 0 chr17 84707027 84707334 -4797219 - AluSx SINE Alu -3 309 1 545 177 10 0 chr17 84708332 84708428 -4796125 - FLAM_A SINE Alu -20 122 26 247 241 119 8 chr17 84708597 84708721 -4795832 - MIR SINE MIR -57 151 2 241 148 37 37 chr17 84708855 84708909 -4795644 - MIR3 SINE MIR -29 179 126 1622 177 4 0 chr17 84709024 84709289 -4795264 - AluJb SINE Alu -46 266 1 2079 121 3 13 chr17 84709624 84709922 -4794631 + AluSq SINE Alu 5 299 -14 2389 82 3 0 chr17 84710296 84710589 -4793964 - AluSp SINE Alu -19 294 1 456 223 74 89 chr17 84711422 84711624 -4792929 + HAL1 LINE L1 13 211 -2296 279 296 64 40 chr17 84712577 84712702 -4791851 + MIR SINE MIR 20 147 -61 377 234 11 0 chr17 84712721 84712815 -4791738 - MER5A DNA MER1_type 0 189 95 2171 113 0 16 chr17 84712847 84713156 -4791397 - AluSx SINE Alu -4 308 5 300 341 51 46 chr17 84713168 84713540 -4791013 - L2 LINE L2 -1880 1434 1061 2226 127 164 14 chr17 84714196 84714756 -4789797 - Tigger3(Golem) DNA MER2_type -3 3026 2355 2284 51 38 14 chr17 84714905 84715197 -4789356 + AluY SINE Alu 1 299 -12 538 253 47 7 chr17 84715279 84715429 -4789124 + MER104 DNA Tc2 1 156 -24 303 325 200 4 chr17 84716209 84716449 -4788104 + L2 LINE L2 2520 2806 -508 600 189 89 24 chr17 84716540 84716709 -4787844 + MER104 DNA MER2_type 1 180 0 460 278 8 15 chr17 84717044 84717177 -4787376 + MIR3 SINE MIR 68 199 -9 25 0 0 0 chr17 84717427 84717452 -4787101 + AT_rich Low_complexity Low_complexity 1 25 0 3129 136 90 66 chr17 84717497 84718010 -4786543 + L1MC2 LINE L1 5641 6140 -204 2203 107 14 0 chr17 84718010 84718300 -4786253 + AluSx SINE Alu 1 294 -18 3129 136 90 66 chr17 84718300 84718436 -4786117 + L1MC2 LINE L1 6140 6309 -35 2347 72 3 7 chr17 84718436 84718754 -4785799 + AluY SINE Alu 1 311 0 3129 136 90 66 chr17 84718754 84718781 -4785772 + L1MC2 LINE L1 6309 6334 -10 2052 109 54 14 chr17 84718979 84719273 -4785280 - AluSq SINE Alu -7 306 1 1766 187 3 7 chr17 84719277 84719577 -4784976 - AluJb SINE Alu -13 299 1 213 94 0 0 chr17 84719666 84719698 -4784855 + (GGA)n Simple_repeat Simple_repeat 2 33 0 839 176 0 0 chr17 84719813 84719949 -4784604 + MER2 DNA MER2_type 1 136 -209 779 159 0 51 chr17 84719958 84720096 -4784457 - FLAM_A SINE Alu -11 131 1 1120 153 17 72 chr17 84720097 84720333 -4784220 + MER2 DNA MER2_type 122 344 -1 305 216 187 14 chr17 84720433 84720572 -4783981 - MIR3 SINE MIR -7 201 39 301 268 124 0 chr17 84720916 84721013 -4783540 + MER58C DNA MER1_type 64 172 -43 32 0 0 0 chr17 84721199 84721231 -4783322 + AT_rich Low_complexity Low_complexity 1 32 0 2231 130 0 0 chr17 84721231 84721538 -4783015 + AluSx SINE Alu 1 307 -5 1070 203 98 39 chr17 84722220 84722525 -4782028 + MER33 DNA MER1_type 2 324 0 331 279 72 39 chr17 84724297 84724505 -4780048 - L2 LINE L2 0 3313 3099 222 213 0 0 chr17 84724591 84724638 -4779915 - L2 LINE L2 -6 3307 3261 2300 90 3 13 chr17 84724672 84724982 -4779571 + AluSg SINE Alu 1 307 -3 197 330 34 11 chr17 84725131 84725219 -4779334 - L2 LINE L2 -202 3070 2981 447 244 21 113 chr17 84726074 84726317 -4778236 + MIR SINE MIR 13 235 -27 2168 110 3 3 chr17 84727171 84727471 -4777082 - AluSx SINE Alu -12 300 1 244 147 0 160 chr17 84727693 84727768 -4776785 + HsTC2 DNA Tc2 17 79 -1819 534 311 86 86 chr17 84729184 84729628 -4774925 + L2 LINE L2 2827 3270 -2 510 272 24 52 chr17 84729740 84729953 -4774600 + L2 LINE L2 2628 2834 -480 185 229 157 14 chr17 84730516 84730586 -4773967 + L2 LINE L2 3140 3219 -94 1290 106 0 29 chr17 84730588 84730795 -4773758 - L1PA14 LINE L1 -3 6158 5958 2264 204 102 45 chr17 84731105 84731868 -4772685 + L1ME2 LINE L1 5296 6102 -62 353 211 143 27 chr17 84731780 84731927 -4772626 + L1MA10 LINE L1 6171 6334 0 * 1575 167 39 4 chr17 84732927 84733208 -4771345 + AluJb SINE Alu 1 291 -21 2172 109 0 7 chr17 84733248 84733542 -4771011 + AluSc SINE Alu 1 292 -17 1906 112 0 64 chr17 84735956 84736298 -4768255 + AluSx SINE Alu 1 312 0 1001 6 0 60 chr17 84736459 84736627 -4767926 + (GAA)n Simple_repeat Simple_repeat 2 159 0 202 243 0 0 chr17 84737154 84737191 -4767362 - L2 LINE L2 -15 3257 3221 434 255 183 26 chr17 84737261 84737414 -4767139 - MIR SINE MIR -73 189 13 201 147 0 0 chr17 84738046 84738080 -4766473 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 248 265 0 60 chr17 84738847 84738930 -4765623 + CT-rich Low_complexity Low_complexity 1 78 0 526 161 11 0 chr17 84739226 84739319 -4765234 - AluJ/FLAM SINE Alu -218 94 1 539 279 217 19 chr17 84739336 84739907 -4764646 - HAL1 LINE L1 -1077 1430 747 834 104 24 32 chr17 84740365 84740490 -4764063 - FLAM_C SINE Alu -19 124 1 246 221 29 15 chr17 84741552 84741620 -4762933 - L1ME LINE L1 -299 5822 5754 265 295 78 47 chr17 84742669 84742798 -4761755 - L2 LINE L2 -1 3271 3139 267 378 24 0 chr17 84742895 84743022 -4761531 - L2 LINE L2 -2540 774 645 678 231 99 29 chr17 84743092 84743521 -4761032 + MLT1E LTR MaLR 39 589 -4 180 0 0 0 chr17 84743599 84743619 -4760934 + (CAA)n Simple_repeat Simple_repeat 3 22 0 386 320 27 7 chr17 84743892 84744039 -4760514 + L1ME LINE L1 326 475 -5595 993 254 180 28 chr17 84744054 84744796 -4759757 + L1ME LINE L1 389 1218 -4862 779 267 55 22 chr17 84744808 84745081 -4759472 + L1ME1 LINE L1 5865 6146 -20 23 0 0 0 chr17 84745117 84745140 -4759413 + AT_rich Low_complexity Low_complexity 1 23 0 2501 53 7 0 chr17 84745147 84745446 -4759107 + AluY SINE Alu 1 301 -10 244 207 126 11 chr17 84746368 84746455 -4758098 + MLT1K LTR MaLR 330 426 -162 1310 179 0 0 chr17 84747019 84747226 -4757327 - AluJo SINE Alu -21 291 85 866 128 32 0 chr17 84747594 84747750 -4756803 + LTR41 LTR ERVL 15 175 -598 529 210 171 75 chr17 84747851 84748103 -4756450 + LTR41 LTR ERVL 483 758 -15 2123 125 7 0 chr17 84748893 84749190 -4755363 - AluSx SINE Alu -13 299 1 2356 80 13 0 chr17 84749839 84750138 -4754415 + AluSx SINE Alu 1 303 -9 2655 23 3 0 chr17 84750582 84750883 -4753670 - AluY SINE Alu -9 302 1 409 289 138 9 chr17 84751523 84751741 -4752812 - MLT1J LTR MaLR -260 251 6 841 132 12 30 chr17 84752054 84752221 -4752332 - MER104 DNA Tc2 -16 164 1 819 356 164 11 chr17 84752567 84753303 -4751250 - L2 LINE L2 -359 2955 2107 299 224 51 97 chr17 84753356 84753552 -4751001 - L2 LINE L2 -19 3294 3108 697 261 103 52 chr17 84753556 84753981 -4750572 - MER20B DNA MER1_type -331 452 6 272 231 356 19 chr17 84754105 84754209 -4750344 - L2 LINE L2 -2 3311 3173 1491 129 36 103 chr17 84754729 84755031 -4749522 - AluJo SINE Alu -30 282 1 2303 99 0 19 chr17 84755121 84755435 -4749118 + AluSx SINE Alu 1 308 -4 469 274 119 49 chr17 84755435 84755916 -4748637 - L1ME4a LINE L1 -288 5833 5323 2323 98 13 0 chr17 84756659 84756966 -4747587 - AluSp SINE Alu -2 311 1 25 31 0 0 chr17 84757012 84757044 -4747509 + AT_rich Low_complexity Low_complexity 1 32 0 1313 212 70 47 chr17 84757222 84757484 -4747069 + MLT1E3 LTR MaLR 3 278 -346 2456 40 3 30 chr17 84757484 84757788 -4746765 - AluY SINE Alu -15 296 1 1313 212 70 47 chr17 84757788 84757912 -4746641 + MLT1E3 LTR MaLR 278 398 -226 310 138 0 17 chr17 84757941 84757999 -4746554 + MLT1E3 LTR MaLR 598 654 0 1516 162 48 38 chr17 84758572 84758862 -4745691 - AluJo SINE Alu -19 293 1 399 215 108 70 chr17 84758865 84759051 -4745502 - LTR50 LTR ERVL -602 193 1 1385 288 88 37 chr17 84759051 84759944 -4744609 - ERVL LTR ERVL -8 5756 4818 374 244 181 0 chr17 84760063 84760223 -4744330 - L1MEd LINE L1 -3619 2510 2322 316 220 27 75 chr17 84760224 84760262 -4744291 - L1MEd LINE L1 -4165 2145 2107 2141 121 3 0 chr17 84760262 84760551 -4744002 - AluSx SINE Alu -22 290 1 316 220 27 75 chr17 84760551 84760698 -4743855 - L1MEd LINE L1 -4203 2107 1969 320 186 212 35 chr17 84760733 84760834 -4743719 - MER105 DNA DNA -43 161 41 1235 199 59 48 chr17 84760834 84761190 -4743363 - MLT1A1 LTR MaLR 0 365 6 1031 213 14 14 chr17 84761198 84761414 -4743139 - MER58A DNA MER1_type -1 223 8 2012 151 13 0 chr17 84761547 84761859 -4742694 + MER21B LTR ERV1 1 316 -547 21 0 0 0 chr17 84761940 84761961 -4742592 + AT_rich Low_complexity Low_complexity 1 21 0 906 194 6 0 chr17 84761961 84762126 -4742427 + FRAM SINE Alu 1 166 0 2407 166 48 40 chr17 84762142 84762617 -4741936 + MER21A LTR ERV1 391 869 -62 588 176 44 37 chr17 84762622 84762758 -4741795 + MER21B LTR ERV1 726 862 -1 522 117 48 48 chr17 84762800 84762903 -4741650 - L1PA8 LINE L1 -1 6171 6069 1216 269 53 48 chr17 84762933 84763691 -4740862 - L1MEd LINE L1 -4471 1658 931 899 165 48 10 chr17 84763691 84763897 -4740656 - L1MA4 LINE L1 0 6300 6087 1216 269 53 48 chr17 84763897 84764054 -4740499 - L1MEd LINE L1 -5198 931 776 307 355 65 13 chr17 84764547 84764702 -4739851 - L1MEd LINE L1 -5901 218 56 2465 69 0 7 chr17 84764904 84765209 -4739344 + AluY SINE Alu 1 303 -8 212 171 0 0 chr17 84765542 84765577 -4738976 + MIR SINE MIR 222 256 -6 2348 125 0 0 chr17 84766141 84766454 -4738099 - AluSq SINE Alu 0 313 1 491 250 49 49 chr17 84766981 84767165 -4737388 - MIR SINE MIR -57 205 22 443 254 0 14 chr17 84767727 84767865 -4736688 + L1MA10 LINE L1 6199 6334 0 277 247 185 0 chr17 84768203 84768284 -4736269 + MIR SINE MIR 45 140 -68 703 177 0 0 chr17 84768478 84768591 -4735962 + FLAM_A SINE Alu 4 116 -17 284 310 89 0 chr17 84768628 84768786 -4735767 + L1M4 LINE L1 3292 3463 -2683 843 197 26 0 chr17 84768801 84768994 -4735559 - L1M4 LINE L1 -760 5386 5189 260 186 17 0 chr17 84769007 84769066 -4735487 + CT-rich Low_complexity Low_complexity 1 60 0 2719 228 31 15 chr17 84769074 84769118 -4735435 - L1M4 LINE L1 -1481 4665 4623 207 0 0 0 chr17 84769118 84769141 -4735412 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2719 228 31 15 chr17 84769141 84769896 -4734657 - L1M4 LINE L1 -1523 4623 3853 2133 107 3 7 chr17 84769896 84770187 -4734366 + AluSx SINE Alu 3 292 -20 1982 253 43 29 chr17 84770214 84770570 -4733983 - L1M4 LINE L1 -2472 3674 3325 2251 100 3 0 chr17 84770570 84770869 -4733684 - AluSx SINE Alu -12 300 1 1982 253 43 29 chr17 84770869 84771316 -4733237 - L1M4 LINE L1 -2821 3325 2859 403 248 9 0 chr17 84771331 84771436 -4733117 - L2 LINE L2 -831 2483 2378 265 197 113 0 chr17 84771436 84771507 -4733046 - L1 LINE L1 -2537 3609 3531 630 244 127 0 chr17 84771530 84771727 -4732826 - L2 LINE L2 -941 2373 2152 1205 196 32 5 chr17 84772070 84772289 -4732264 - AluJo SINE Alu -3 309 85 1168 85 223 0 chr17 84772314 84772417 -4732136 + MER30 DNA MER1_type 1 80 -150 222 37 0 0 chr17 84772417 84772444 -4732109 + (CA)n Simple_repeat Simple_repeat 2 28 0 1168 85 223 0 chr17 84772444 84772528 -4732025 + MER30 DNA MER1_type 80 230 0 1176 206 0 14 chr17 84772644 84772862 -4731691 + AluJb SINE Alu 94 308 -4 182 167 0 0 chr17 84772954 84772984 -4731569 - MER5C DNA MER1_type -5 319 290 2258 83 10 0 chr17 84773551 84773841 -4730712 + AluSx SINE Alu 2 294 -18 257 243 100 0 chr17 84773969 84774039 -4730514 + MIR SINE MIR 172 248 -14 2229 84 0 3 chr17 84774457 84774743 -4729810 + AluSx SINE Alu 1 285 -27 2077 99 3 3 chr17 84774768 84775085 -4729468 + AluSg SINE Alu 1 317 0 22 0 0 0 chr17 84776008 84776030 -4728523 + AT_rich Low_complexity Low_complexity 1 22 0 182 295 33 0 chr17 84776913 84776974 -4727579 - L2 LINE L2 0 3313 3251 490 234 62 8 chr17 84777195 84777323 -4727230 + MER103 DNA DNA 2 136 -30 420 325 94 15 chr17 84777568 84777771 -4726782 + MIR SINE MIR 2 220 -42 490 263 152 12 chr17 84777881 84778052 -4726501 + MIR SINE MIR 49 243 -19 22 70 0 0 chr17 84779701 84779744 -4724809 + AT_rich Low_complexity Low_complexity 1 43 0 2574 59 7 0 chr17 84781644 84781948 -4722605 + AluSq SINE Alu 1 306 -7 226 138 0 52 chr17 84783845 84783903 -4720650 + (CGG)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr17 84783932 84783953 -4720600 + GC_rich Low_complexity Low_complexity 1 21 0 219 36 0 0 chr17 84783988 84784016 -4720537 + (CGG)n Simple_repeat Simple_repeat 2 29 0 213 94 0 0 chr17 84784131 84784163 -4720390 + (CGG)n Simple_repeat Simple_repeat 2 33 0 271 273 16 8 chr17 84784216 84784337 -4720216 + (CGG)n Simple_repeat Simple_repeat 3 124 0 21 36 0 0 chr17 84784876 84784904 -4719649 + GC_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr17 84784918 84784954 -4719599 + GC_rich Low_complexity Low_complexity 1 36 0 2075 132 16 0 chr17 84786489 84786793 -4717760 + AluY SINE Alu 1 309 -2 797 333 79 52 chr17 84786798 84787377 -4717176 + L3 LINE CR1 804 1407 -170 722 143 0 0 chr17 84787377 84787496 -4717057 + L1PB1 LINE L1 6033 6151 0 797 333 79 52 chr17 84787496 84787612 -4716941 + L3 LINE CR1 1407 1518 -59 808 223 11 16 chr17 84787614 84787798 -4716755 + MER5A DNA MER1_type 1 183 -6 300 234 234 16 chr17 84788121 84788245 -4716308 - MER5A DNA MER1_type -4 185 35 244 268 141 0 chr17 84788315 84788386 -4716167 + MIR SINE MIR 58 138 -70 181 276 0 69 chr17 84788402 84788460 -4716093 - L2 LINE L2 -15 3298 3245 2056 142 3 3 chr17 84788771 84789074 -4715479 - AluSx SINE Alu -5 307 5 2262 171 33 9 chr17 84790040 84790495 -4714058 + MLT1C LTR MaLR 1 466 -1 288 248 0 0 chr17 84790841 84790942 -4713611 + (TG)n Simple_repeat Simple_repeat 2 102 0 406 320 40 11 chr17 84791933 84792108 -4712445 + L2 LINE L2 3134 3313 0 411 179 7 46 chr17 84792253 84792404 -4712149 + CT-rich Low_complexity Low_complexity 4 148 0 2191 101 0 11 chr17 84792507 84792793 -4711760 - AluSx SINE Alu -25 287 5 29 47 0 0 chr17 84792847 84792890 -4711663 + AT_rich Low_complexity Low_complexity 1 43 0 1324 263 135 19 chr17 84792949 84793429 -4711124 - MLT1F LTR MaLR -4 538 3 210 288 81 27 chr17 84793590 84793701 -4710852 + MIR3 SINE MIR 92 208 0 609 263 145 70 chr17 84794028 84794386 -4710167 + MLT1J2 LTR MaLR 59 443 -7 1964 163 0 3 chr17 84794736 84795025 -4709528 - AluJb SINE Alu -24 288 1 2070 125 3 41 chr17 84795066 84795385 -4709168 - AluSx SINE Alu -1 311 5 572 252 41 59 chr17 84795385 84795442 -4709111 - HAL1 LINE L1 -23 2484 2428 267 31 0 0 chr17 84795442 84795474 -4709079 + (CAA)n Simple_repeat Simple_repeat 2 33 0 572 252 41 59 chr17 84795474 84795706 -4708847 - HAL1 LINE L1 -79 2428 2200 338 278 122 0 chr17 84796095 84796210 -4708343 + L2 LINE L2 3134 3262 -10 2479 48 3 10 chr17 84796210 84796522 -4708031 + AluY SINE Alu 1 310 0 259 298 143 0 chr17 84796980 84797064 -4707489 + L2 LINE L2 3177 3272 0 2986 130 77 25 chr17 84797085 84797347 -4707206 - L1PB2 LINE L1 -1 6150 5903 2606 56 0 0 chr17 84797347 84797649 -4706904 + AluY SINE Alu 1 302 -9 2986 130 77 25 chr17 84797649 84797957 -4706596 - L1PB2 LINE L1 -248 5903 5550 285 29 0 0 chr17 84798682 84798716 -4705837 + (TG)n Simple_repeat Simple_repeat 2 35 0 449 284 103 87 chr17 84798978 84799348 -4705205 - L1ME4a LINE L1 -2 6119 5744 2294 118 0 0 chr17 84799497 84799803 -4704750 + AluSx SINE Alu 1 306 -6 253 242 0 0 chr17 84801219 84801285 -4703268 - MLT2B1 LTR ERVL 0 520 455 285 221 0 0 chr17 84801285 84801353 -4703200 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 1149 207 28 32 chr17 84801353 84801371 -4703182 - MLT2B3 LTR ERVL -20 534 517 2188 129 3 0 chr17 84801371 84801665 -4702888 + AluSx SINE Alu 1 295 -17 1149 207 28 32 chr17 84801665 84801931 -4702622 - MLT2B3 LTR ERVL -37 517 251 597 186 0 0 chr17 84801932 84802045 -4702508 - MLT2B3 LTR ERVL -441 113 1 369 220 11 44 chr17 84802060 84802151 -4702402 - MER45 DNA AcHobo -90 88 1 194 314 150 7 chr17 84802200 84802340 -4702213 + L2 LINE L2 3113 3272 0 368 253 101 80 chr17 84803113 84803338 -4701215 + L1ME4a LINE L1 5715 5934 -187 2355 113 0 0 chr17 84803338 84803648 -4700905 + AluSg SINE Alu 1 310 0 368 253 101 80 chr17 84803648 84803744 -4700809 + L1ME4a LINE L1 5934 6027 -94 2163 110 44 6 chr17 84803744 84804108 -4700445 - L1PA10 LINE L1 0 6168 5791 2131 144 0 0 chr17 84804117 84804429 -4700124 - AluJb SINE Alu 0 312 1 368 253 101 80 chr17 84804429 84804484 -4700069 + L1ME4a LINE L1 6034 6110 -11 351 0 0 0 chr17 84805132 84805171 -4699382 + (TTA)n Simple_repeat Simple_repeat 3 41 0 475 312 85 49 chr17 84805187 84805369 -4699184 + MLT1K LTR MaLR 164 338 -250 1701 96 9 0 chr17 84805369 84805587 -4698966 - AluSg/x SINE Alu -9 301 82 475 312 85 49 chr17 84805587 84805814 -4698739 + MLT1K LTR MaLR 338 588 0 225 345 85 17 chr17 84805814 84805991 -4698562 - L2 LINE L2 -97 3175 2987 4929 49 54 62 chr17 84806804 84807576 -4696977 + MER4E LTR ERV1 1 766 0 2283 120 0 0 chr17 84808393 84808693 -4695860 - AluSx SINE Alu -12 300 1 204 313 0 31 chr17 84808741 84808837 -4695716 + CT-rich Low_complexity Low_complexity 3 95 0 233 326 116 34 chr17 84809118 84809173 -4695380 + MIR SINE MIR 89 138 -124 2093 138 0 10 chr17 84809173 84809477 -4695076 - AluJo SINE Alu -7 305 5 233 326 116 34 chr17 84809477 84809568 -4694985 + MIR SINE MIR 138 247 -15 2241 97 0 57 chr17 84809976 84810307 -4694246 - AluSq SINE Alu -1 312 1 2077 157 3 3 chr17 84810487 84810799 -4693754 + AluJb SINE Alu 1 312 0 369 0 0 0 chr17 84810799 84810840 -4693713 + (TA)n Simple_repeat Simple_repeat 1 41 0 2394 106 0 3 chr17 84810847 84811159 -4693394 + AluSx SINE Alu 1 311 -1 321 250 23 39 chr17 84812248 84812376 -4692177 + (GGGTG)n Simple_repeat Simple_repeat 3 128 0 1670 167 91 11 chr17 84814243 84814572 -4689981 - AluJb SINE Alu 0 352 1 221 288 0 0 chr17 84814680 84814739 -4689814 + L2 LINE L2 3161 3219 -94 2094 130 0 3 chr17 84815245 84815544 -4689009 - AluSq SINE Alu -11 302 5 2251 198 12 19 chr17 84815798 84816283 -4688270 + MER66B LTR ERV1 1 482 -4 201 74 0 0 chr17 84816834 84816861 -4687692 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 182 245 38 0 chr17 84817006 84817059 -4687494 - L2 LINE L2 -1 3312 3258 378 107 0 0 chr17 84817171 84817227 -4687326 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 2529 78 0 10 chr17 84817227 84817536 -4687017 - AluSp SINE Alu -7 306 1 1946 173 6 13 chr17 84818677 84818989 -4685564 - AluJb SINE Alu 0 312 3 2667 192 82 17 chr17 84819830 84820364 -4684189 + MER97b DNA MER1_type? 40 626 -427 2155 125 0 3 chr17 84820364 84820659 -4683894 + AluSq SINE Alu 1 294 -19 2667 192 82 17 chr17 84820659 84820779 -4683774 + MER97b DNA MER1_type? 626 737 -316 1801 173 44 124 chr17 84820826 84820905 -4683648 - MLT1D LTR MaLR 0 505 421 1566 158 4 0 chr17 84820905 84821145 -4683408 - AluJo SINE Alu -27 285 45 1801 173 44 124 chr17 84821145 84821614 -4682939 - MLT1D LTR MaLR -84 421 1 236 111 22 0 chr17 84821746 84821791 -4682762 + (TG)n Simple_repeat Simple_repeat 1 46 0 2353 86 0 17 chr17 84822029 84822193 -4682360 - AluSq SINE Alu -16 297 139 2225 98 10 26 chr17 84822193 84822528 -4682025 - AluY SINE Alu 0 311 1 2353 86 0 17 chr17 84822528 84822665 -4681888 - AluSq SINE Alu -174 139 1 1124 204 5 0 chr17 84822665 84822799 -4681754 - AluSx SINE Alu -177 135 1 25 31 0 0 chr17 84822804 84822836 -4681717 + AT_rich Low_complexity Low_complexity 1 32 0 968 124 43 25 chr17 84822840 84823001 -4681552 - U1 snRNA snRNA -1 164 1 226 246 35 0 chr17 84823005 84823062 -4681491 - L2 LINE L2 -45 3268 3210 230 311 115 0 chr17 84823083 84823205 -4681348 + L2 LINE L2 3169 3304 -9 1175 182 117 68 chr17 84823304 84823733 -4680820 - LTR7 LTR ERV1 0 450 1 1444 77 0 0 chr17 84823855 84824050 -4680503 - HERVH LTR ERV1 -5334 2379 2185 2812 32 0 0 chr17 84824052 84824363 -4680190 + AluY SINE Alu 1 311 0 1059 18 0 0 chr17 84825369 84825481 -4679072 - AluY SINE Alu -117 194 83 724 129 11 43 chr17 84825497 84825683 -4678870 + CT-rich Low_complexity Low_complexity 1 180 0 180 111 0 0 chr17 84826779 84826806 -4677747 + (A)n Simple_repeat Simple_repeat 1 27 0 570 172 33 16 chr17 84827603 84827725 -4676828 - MIR SINE MIR -32 230 107 200 262 16 0 chr17 84828413 84828474 -4676079 - MIR SINE MIR -50 212 151 459 241 30 30 chr17 84828833 84828955 -4675598 + MER5B DNA MER1_type 1 125 -53 2267 102 20 0 chr17 84828955 84829248 -4675305 - AluSq SINE Alu -14 299 1 17684 63 7 0 chr17 84829286 84829634 -4674919 - L1PA6 LINE L1 -2 6152 5808 2702 55 0 0 chr17 84829634 84829944 -4674609 - AluY SINE Alu 0 311 2 17684 63 7 0 chr17 84829944 84832806 -4671747 - L1PA6 LINE L1 -346 5808 2954 254 337 20 20 chr17 84834205 84834306 -4670247 - L2 LINE L2 -5 3308 3208 204 216 0 0 chr17 84834537 84834574 -4669979 + (TG)n Simple_repeat Simple_repeat 2 38 0 270 0 0 0 chr17 84834766 84834796 -4669757 + (TG)n Simple_repeat Simple_repeat 2 31 0 225 65 0 0 chr17 84834799 84834830 -4669723 + (GA)n Simple_repeat Simple_repeat 1 31 0 184 260 182 6 chr17 84835227 84835408 -4669145 + L2 LINE L2 2853 3065 -207 2694 58 0 0 chr17 84835588 84835897 -4668656 + AluY SINE Alu 1 309 -2 433 310 29 12 chr17 84835943 84836114 -4668439 - MIR SINE MIR -66 196 23 201 125 50 25 chr17 84837281 84837300 -4667253 + (CATCT)n Simple_repeat Simple_repeat 1 18 -23 2198 73 0 0 chr17 84837300 84837559 -4666994 - AluSc SINE Alu -5 304 46 201 125 50 25 chr17 84837559 84837579 -4666974 + (CATCT)n Simple_repeat Simple_repeat 18 41 0 425 321 78 16 chr17 84837715 84837908 -4666645 + MIR SINE MIR 23 227 -35 370 220 22 55 chr17 84838045 84838136 -4666417 - L1MC4 LINE L1 -1341 6701 6614 347 295 74 47 chr17 84838157 84838347 -4666206 - L1MC4 LINE L1 -1327 6715 6521 246 81 0 0 chr17 84838886 84838923 -4665630 + (T)n Simple_repeat Simple_repeat 1 37 0 2248 115 0 0 chr17 84839264 84839569 -4664984 - AluSx SINE Alu 0 312 8 287 297 51 8 chr17 84839739 84839857 -4664696 - L2 LINE L2 0 3313 3191 835 200 68 11 chr17 84840087 84840277 -4664276 + MLT1E LTR MaLR 391 591 -2 480 296 51 75 chr17 84840452 84840595 -4663958 + MIR SINE MIR 11 147 -115 1858 119 49 80 chr17 84840595 84840982 -4663571 - THE1C LTR MaLR 0 375 1 480 296 51 75 chr17 84840982 84841091 -4663462 + MIR SINE MIR 147 257 -5 1589 168 32 38 chr17 84841675 84842021 -4662532 - MLT1A2 LTR MaLR -30 344 1 2447 85 0 3 chr17 84842468 84842773 -4661780 + AluY SINE Alu 2 305 -6 446 145 24 0 chr17 84844940 84845023 -4659530 + MIR SINE MIR 45 129 -133 2309 95 0 3 chr17 84846058 84846354 -4658199 + AluSq SINE Alu 8 302 -11 1353 122 0 0 chr17 84846396 84846576 -4657977 - AluSg/x SINE Alu -4 306 127 405 0 0 0 chr17 84846770 84846815 -4657738 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2230 111 0 0 chr17 84846903 84847201 -4657352 + AluSx SINE Alu 1 298 -14 2443 88 11 3 chr17 84847210 84847541 -4657012 + L1MA1 LINE L1 5934 6270 -32 309 26 0 0 chr17 84847541 84847579 -4656974 + (TA)n Simple_repeat Simple_repeat 2 39 0 2443 88 11 3 chr17 84847579 84847609 -4656944 + L1MA1 LINE L1 6270 6298 -4 304 231 97 45 chr17 84847639 84847773 -4656780 - MIR SINE MIR -77 185 45 1710 139 132 0 chr17 84847806 84848072 -4656481 - AluJb SINE Alu -11 301 1 209 293 36 122 chr17 84850419 84850723 -4653830 + L2 LINE L2 2992 3269 -3 1413 178 89 4 chr17 84851611 84851880 -4652673 + AluJo SINE Alu 1 292 -20 1411 235 102 30 chr17 84852895 84853172 -4651381 - MLT1C LTR MaLR 0 467 147 2341 105 0 0 chr17 84853172 84853476 -4651077 + AluSx SINE Alu 1 304 -8 1411 235 102 30 chr17 84853476 84853628 -4650925 - MLT1C LTR MaLR -320 147 7 249 97 0 65 chr17 84854056 84854118 -4650435 + (TTCCC)n Simple_repeat Simple_repeat 3 60 0 1870 142 13 54 chr17 84854109 84854501 -4650052 - AluSx SINE Alu 0 379 1 289 193 105 70 chr17 84855670 84855784 -4648769 + MLT1I LTR MaLR 275 392 -17 353 259 112 9 chr17 84855800 84855916 -4648637 - L2 LINE L2 0 3272 3145 264 224 0 0 chr17 84857207 84857274 -4647279 + CT-rich Low_complexity Low_complexity 3 69 0 901 162 0 17 chr17 84857299 84857531 -4647022 + CT-rich Low_complexity Low_complexity 1 228 0 2180 92 15 0 chr17 84857633 84857904 -4646649 - AluSx SINE Alu -37 275 1 1071 161 31 10 chr17 84858139 84858331 -4646222 + MER105 DNA DNA 1 196 -8 690 182 8 15 chr17 84858403 84858535 -4646018 + FLAM_A SINE Alu 1 131 -2 6590 77 28 0 chr17 84858958 84859831 -4644722 + MER11D LTR ERVK 1 897 0 212 143 24 0 chr17 84859919 84859961 -4644592 + GA-rich Low_complexity Low_complexity 3 45 0 249 263 25 12 chr17 84860149 84860229 -4644324 + MLT1J LTR MaLR 119 199 -312 323 254 34 25 chr17 84860297 84860415 -4644138 + MLT1J LTR MaLR 393 511 0 1769 179 58 3 chr17 84860602 84860948 -4643605 + MLT1A1 LTR MaLR 1 365 0 2392 88 3 3 chr17 84861435 84861740 -4642813 - AluSp SINE Alu -7 306 2 2147 125 0 0 chr17 84862650 84862803 -4641750 - AluSx SINE Alu -23 289 134 2116 105 7 7 chr17 84862803 84863088 -4641465 - AluSg SINE Alu -18 292 8 2147 125 0 0 chr17 84863088 84863223 -4641330 - AluSx SINE Alu -177 135 1 243 224 194 0 chr17 84865082 84865149 -4639404 + MER116 DNA Mariner 1 80 0 392 167 31 115 chr17 84865314 84865506 -4639047 + MER53 DNA DNA 1 176 -13 2533 80 3 0 chr17 84865657 84865968 -4638585 - AluSx SINE Alu 0 312 1 254 314 97 27 chr17 84867046 84867231 -4637322 + L2 LINE L2 2907 3104 -209 303 296 34 0 chr17 84867232 84867320 -4637233 - L2 LINE L2 -18 3254 3164 1717 221 88 9 chr17 84867470 84867891 -4636662 - MER82 DNA MER2_type 0 653 200 1195 158 38 0 chr17 84868109 84868318 -4636235 - MER82 DNA MER2_type -435 218 2 21 57 0 0 chr17 84868318 84868353 -4636200 + AT_rich Low_complexity Low_complexity 1 35 0 808 161 0 0 chr17 84869178 84869302 -4635251 - AluJb SINE Alu -188 124 1 1726 117 121 8 chr17 84870215 84870479 -4634074 + AluJo SINE Alu 1 294 -18 302 266 177 45 chr17 84871845 84872042 -4632511 - L1MC4a LINE L1 -1637 6171 6001 186 103 0 0 chr17 84872042 84872071 -4632482 + (CA)n Simple_repeat Simple_repeat 1 29 0 302 266 177 45 chr17 84872071 84872297 -4632256 - L1MC4a LINE L1 -1807 6001 5692 804 165 117 78 chr17 84872306 84872512 -4632041 + AluJo SINE Alu 94 307 -5 526 310 108 40 chr17 84872597 84872968 -4631585 - L1MC4a LINE L1 -764 5382 4987 2308 95 0 20 chr17 84873086 84873391 -4631162 - AluSx SINE Alu -13 299 1 1204 174 118 24 chr17 84873424 84873883 -4630670 - Charlie1 DNA MER1_type -7 2754 5 1980 142 17 10 chr17 84874546 84874834 -4629719 - AluJo SINE Alu -14 298 9 652 186 0 0 chr17 84874853 84874955 -4629598 - U6 snRNA snRNA -4 103 2 296 193 0 0 chr17 84875070 84875127 -4629426 - MER5A DNA MER1_type -93 96 40 2293 98 14 0 chr17 84875659 84875954 -4628599 - AluSx SINE Alu -13 299 1 1702 188 10 20 chr17 84876533 84876836 -4627717 - AluJb SINE Alu -12 300 1 578 157 130 9 chr17 84877377 84877492 -4627061 - FLAM_A SINE Alu -4 129 1 1473 121 29 5 chr17 84877512 84877718 -4626835 + AluSx SINE Alu 1 211 -101 711 119 0 0 chr17 84877761 84877862 -4626691 + AluSx SINE Alu 200 300 -9 1625 146 148 58 chr17 84878406 84878616 -4625937 + Tigger2a DNA MER2_type 1 191 -2517 248 53 26 0 chr17 84878616 84878654 -4625899 + (TA)n Simple_repeat Simple_repeat 1 39 0 2089 130 3 0 chr17 84878654 84878939 -4625614 - AluSx SINE Alu -26 286 1 1625 146 148 58 chr17 84878939 84879125 -4625428 + Tigger2a DNA MER2_type 190 434 0 840 224 43 12 chr17 84880206 84880367 -4624186 - FAM SINE Alu -9 166 1 1136 112 9 25 chr17 84881226 84881440 -4623113 + AluSx SINE Alu 55 307 -3 197 271 34 17 chr17 84881449 84881508 -4623045 - L2 LINE L2 -4 3268 3209 2054 136 10 7 chr17 84882028 84882337 -4622216 - AluJo SINE Alu -2 310 1 2415 81 0 7 chr17 84885138 84885435 -4619118 + AluY SINE Alu 1 295 -16 2352 110 0 0 chr17 84885445 84885744 -4618809 + AluSx SINE Alu 1 299 -13 915 142 0 0 chr17 84885753 84885880 -4618673 + FLAM_C SINE Alu 1 127 -6 219 263 289 0 chr17 84886033 84886147 -4618406 + MIR SINE MIR 82 228 -34 1710 143 501 7 chr17 84886285 84886846 -4617707 + Tigger3b DNA MER2_type 2 839 -392 360 303 0 0 chr17 84887000 84887175 -4617378 + (TAGTG)n Simple_repeat Simple_repeat 2 176 0 204 354 0 0 chr17 84887355 84887533 -4617020 + (CAGTA)n Simple_repeat Simple_repeat 3 180 0 2555 136 27 0 chr17 84887590 84887995 -4616558 + Tigger3b DNA MER2_type 817 1232 0 773 153 0 0 chr17 84888016 84888134 -4616419 - FLAM_A SINE Alu -6 136 19 2410 103 3 0 chr17 84888244 84888555 -4615998 - AluSx SINE Alu 0 312 1 427 204 147 141 chr17 84888729 84889048 -4615505 - Charlie8 DNA MER1_type -2160 257 1 470 291 39 11 chr17 84889356 84889535 -4615018 + L2 LINE L2 3111 3294 -19 243 140 0 0 chr17 84890525 84890575 -4613978 + (TGG)n Simple_repeat Simple_repeat 3 52 0 267 198 62 49 chr17 84893275 84893356 -4611197 - MER103 DNA DNA -27 139 58 399 269 87 24 chr17 84895088 84895425 -4609128 + L1P5 LINE L1 4906 5293 -858 2263 102 14 0 chr17 84895425 84895720 -4608833 + AluSx SINE Alu 1 299 -13 399 269 87 24 chr17 84895720 84895883 -4608670 + L1P5 LINE L1 5293 5444 -707 726 212 0 0 chr17 84896007 84896177 -4608376 + (CCCA)n Simple_repeat Simple_repeat 3 172 0 * 835 169 11 0 chr17 84896162 84896339 -4608214 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 209 248 17 111 chr17 84897102 84897219 -4607334 - MIR SINE MIR -86 122 17 186 356 42 74 chr17 84897547 84897831 -4606722 - L2 LINE L2 -49 3223 2949 247 179 0 0 chr17 84898007 84898046 -4606507 - MIR SINE MIR -60 148 110 203 167 28 0 chr17 84899105 84899141 -4605412 + CT-rich Low_complexity Low_complexity 1 37 0 288 369 0 20 chr17 84899145 84899294 -4605259 + (CA)n Simple_repeat Simple_repeat 1 146 0 271 353 0 27 chr17 84899361 84899545 -4605008 + (CA)n Simple_repeat Simple_repeat 1 179 0 205 298 39 19 chr17 84899497 84899601 -4604952 + (CATA)n Simple_repeat Simple_repeat 1 106 0 * 234 217 22 0 chr17 84900199 84900245 -4604308 + MER91C DNA MER1_type 62 108 -32 297 265 200 70 chr17 84900502 84900717 -4603836 - MIR SINE MIR -7 255 13 219 103 0 0 chr17 84900821 84900860 -4603693 + (CCTG)n Simple_repeat Simple_repeat 2 40 0 283 159 48 16 chr17 84901876 84901939 -4602614 + L2 LINE L2 3248 3312 -1 923 143 0 0 chr17 84902417 84902550 -4602003 + AluJo SINE Alu 1 133 -169 1153 137 0 6 chr17 84902579 84902747 -4601806 + AluJo SINE Alu 117 283 -29 1523 242 50 0 chr17 84902787 84903150 -4601403 + L1ME1 LINE L1 5782 6162 -4 2272 113 0 0 chr17 84904567 84904858 -4599695 - AluSx SINE Alu -12 300 10 391 227 137 78 chr17 84905252 84905612 -4598941 - MLT1G1 LTR MaLR -46 509 107 317 340 116 34 chr17 84905631 84906072 -4598481 + L2 LINE L2 1913 2389 -925 220 296 0 14 chr17 84906598 84906669 -4597884 + C-rich Low_complexity Low_complexity 3 72 0 338 270 185 11 chr17 84906736 84906914 -4597639 - MIR SINE MIR -20 242 34 924 185 0 0 chr17 84908319 84908624 -4595929 + (TG)n Simple_repeat Simple_repeat 1 305 0 1840 175 22 62 chr17 84908778 84909183 -4595370 + MLT1B LTR MaLR 2 390 0 436 198 9 9 chr17 84909280 84909386 -4595167 - MER113 DNA MER1_type? -120 401 296 2315 191 8 79 chr17 84909386 84909772 -4594781 - L1MB5 LINE L1 -9 6165 5838 2172 111 6 25 chr17 84909772 84910087 -4594466 - AluSx SINE Alu -3 309 1 2315 191 8 79 chr17 84910087 84910322 -4594231 - L1MB5 LINE L1 -336 5838 5588 381 283 92 17 chr17 84910327 84910500 -4594053 - MER113 DNA MER1_type? -205 316 131 2006 143 0 0 chr17 84910507 84910793 -4593760 - AluSx SINE Alu -6 306 21 1675 146 61 11 chr17 84910844 84910962 -4593591 + AluJb SINE Alu 1 112 -200 230 0 33 0 chr17 84910962 84910992 -4593561 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1675 146 61 11 chr17 84910992 84911153 -4593400 + AluJb SINE Alu 112 294 -18 417 261 18 27 chr17 84911153 84911264 -4593289 + L2 LINE L2 3202 3311 -2 310 219 34 0 chr17 84911401 84911487 -4593066 + MIR SINE MIR 61 152 -56 262 273 0 23 chr17 84911823 84911911 -4592642 - MIR SINE MIR -120 142 57 633 179 0 0 chr17 84912756 84912879 -4591674 + (CA)n Simple_repeat Simple_repeat 2 124 0 254 341 24 0 chr17 84913477 84913562 -4590991 + MIR3 SINE MIR 70 156 -52 2776 158 55 4 chr17 84913754 84914280 -4590273 - MER74A LTR ERVL -3 555 3 2456 62 3 0 chr17 84914323 84914611 -4589942 - AluSp SINE Alu -24 289 1 226 128 0 26 chr17 84914647 84914686 -4589867 - Alu SINE Alu -10 165 128 2644 188 26 26 chr17 84914686 84915061 -4589492 - L1MC2 LINE L1 -7 6337 5960 1960 125 10 28 chr17 84915061 84915349 -4589204 - AluSx SINE Alu -29 283 1 2644 188 26 26 chr17 84915349 84915549 -4589004 - L1MC2 LINE L1 -383 5961 5762 525 147 0 0 chr17 84916291 84916386 -4588167 + (TG)n Simple_repeat Simple_repeat 2 96 0 185 250 113 0 chr17 84917831 84917911 -4586642 + MIR SINE MIR 31 119 -89 795 223 23 6 chr17 84918354 84918529 -4586024 - MIR SINE MIR -39 223 46 231 300 0 0 chr17 84919020 84919150 -4585403 + (TG)n Simple_repeat Simple_repeat 1 130 0 594 197 0 0 chr17 84919826 84919973 -4584580 + (TCCA)n Simple_repeat Simple_repeat 2 148 0 389 238 14 0 chr17 84920012 84920159 -4584394 + (TCCA)n Simple_repeat Simple_repeat 4 152 0 284 268 0 8 chr17 84920174 84920301 -4584252 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 855 149 18 0 chr17 84920321 84920489 -4584064 + (TCCA)n Simple_repeat Simple_repeat 4 174 0 287 353 194 0 chr17 84920877 84921016 -4583537 - MIR SINE MIR -4 258 93 371 266 44 18 chr17 84921019 84921132 -4583421 + MIR SINE MIR 32 147 -115 1302 136 3 6 chr17 84922828 84923180 -4581373 + (TGGA)n Simple_repeat Simple_repeat 1 352 0 416 247 7 0 chr17 84923230 84923384 -4581169 + (TGGA)n Simple_repeat Simple_repeat 4 158 0 270 330 11 0 chr17 84923392 84923483 -4581070 + MLT1H1 LTR MaLR 95 186 -369 277 239 0 28 chr17 84923492 84923563 -4580990 - MLT1H1 LTR MaLR -486 69 1 2149 112 0 13 chr17 84925076 84925390 -4579163 - AluSx SINE Alu 0 312 3 261 376 64 0 chr17 84925536 84925661 -4578892 - MIR3 SINE MIR -41 167 35 449 338 14 0 chr17 84925955 84926103 -4578450 - L2 LINE L2 0 3272 3123 190 291 0 0 chr17 84926140 84926195 -4578358 - L2 LINE L2 -229 3043 2989 238 380 72 31 chr17 84926393 84926711 -4577842 - L3 LINE CR1 -80 1497 1167 214 186 23 0 chr17 84927147 84927190 -4577363 + CT-rich Low_complexity Low_complexity 4 47 0 251 373 71 0 chr17 84927773 84927942 -4576611 - MIR3 SINE MIR -4 204 24 457 204 13 0 chr17 84929061 84929213 -4575340 + (CA)n Simple_repeat Simple_repeat 1 154 0 810 192 2 0 chr17 84929235 84929645 -4574908 + (CA)n Simple_repeat Simple_repeat 1 411 0 752 320 43 24 chr17 84930048 84930417 -4574136 + L1M4 LINE L1 3576 3951 -2195 387 302 24 40 chr17 84930452 84930801 -4573752 - L1MC4 LINE L1 -1339 6703 6528 418 304 71 28 chr17 84930830 84931304 -4573249 - L1MC4 LINE L1 -1339 6703 6525 384 306 51 36 chr17 84931292 84931691 -4572862 - L1MC4 LINE L1 -1339 6703 6525 * 353 310 20 53 chr17 84931677 84931985 -4572568 - L1MC4 LINE L1 -1339 6703 6528 * 3782 147 36 3 chr17 84931999 84932638 -4571915 + L1MA4 LINE L1 5636 6295 -5 1694 297 107 11 chr17 84932663 84933383 -4571170 + L1ME3A LINE L1 5379 6167 -3 217 231 33 44 chr17 84934047 84934138 -4570415 - MER5A DNA MER1_type -56 133 44 254 217 58 0 chr17 84934291 84934360 -4570193 + MIR SINE MIR 63 135 -127 207 0 0 0 chr17 84936115 84936138 -4568415 + (TC)n Simple_repeat Simple_repeat 2 24 0 2254 104 3 0 chr17 84936138 84936446 -4568107 - AluSx SINE Alu -3 309 1 3520 199 37 29 chr17 84936793 84937037 -4567516 - L1MB5 LINE L1 0 6174 5933 1891 97 18 18 chr17 84937037 84937316 -4567237 + AluSx SINE Alu 24 302 -10 3520 199 37 29 chr17 84937316 84937931 -4566622 - L1MB5 LINE L1 -241 5933 5308 2211 100 7 3 chr17 84937941 84938240 -4566313 - AluSx SINE Alu -12 300 1 477 303 11 40 chr17 84938244 84938320 -4566233 + MIR SINE MIR 93 170 -92 582 223 9 0 chr17 84938320 84938432 -4566121 - MER81 DNA DNA -1 113 1 477 303 11 40 chr17 84938432 84938530 -4566023 + MIR SINE MIR 170 262 0 186 244 0 0 chr17 84938722 84938763 -4565790 - MIR SINE MIR -2 260 220 317 193 72 48 chr17 84939577 84939660 -4564893 + MIR SINE MIR 19 103 -105 2088 131 0 7 chr17 84939945 84940251 -4564302 - AluSx SINE Alu -8 304 1 634 314 5 0 chr17 84940253 84940444 -4564109 + L3 LINE CR1 1285 1476 -101 2102 228 66 31 chr17 84940451 84941004 -4563549 + MLT1E LTR MaLR 1 528 -27 191 233 83 17 chr17 84941046 84941106 -4563447 + L3 LINE CR1 1487 1550 -27 295 261 102 33 chr17 84941268 84941430 -4563123 + MIR SINE MIR 23 198 -64 544 355 14 9 chr17 84941747 84941958 -4562595 - L2 LINE L2 -17 3296 3085 761 266 68 10 chr17 84941977 84942184 -4562369 + MER58A DNA MER1_type 6 224 0 389 244 309 5 chr17 84942184 84942596 -4561957 - L2 LINE L2 -245 3068 2501 374 253 41 65 chr17 84943961 84943985 -4560568 - L1MB8 LINE L1 -7 6171 6148 1972 165 15 85 chr17 84943985 84944278 -4560275 + MLT1B LTR MaLR 4 261 -129 1866 145 27 0 chr17 84944278 84944575 -4559978 + AluJb SINE Alu 1 305 -7 1972 165 15 85 chr17 84944575 84944693 -4559860 + MLT1B LTR MaLR 261 386 -4 374 253 41 65 chr17 84944693 84944838 -4559715 - L1MB8 LINE L1 -30 6148 6006 313 107 36 18 chr17 84944839 84944895 -4559658 + MSTD LTR MaLR 2 58 -338 207 0 0 0 chr17 84944939 84944962 -4559591 + (CAG)n Simple_repeat Simple_repeat 1 23 0 919 100 23 0 chr17 84945085 84945215 -4559338 - AluSq/x SINE Alu -180 133 1 24 32 0 0 chr17 84945452 84945483 -4559070 + AT_rich Low_complexity Low_complexity 1 31 0 2119 109 0 3 chr17 84945483 84945776 -4558777 + AluSg SINE Alu 2 293 -17 1680 181 7 0 chr17 84945776 84946064 -4558489 - AluJo SINE Alu -20 292 3 1103 226 72 41 chr17 84946065 84946428 -4558125 - LTR37A LTR ERV1 -7 419 46 246 341 177 18 chr17 84947735 84947899 -4556654 - L3 LINE CR1 -77 1500 1311 1032 233 118 45 chr17 84947900 84948230 -4556323 + MLT1A1 LTR MaLR 11 364 -1 2294 102 0 0 chr17 84948251 84948554 -4555999 - AluSg SINE Alu -7 303 1 286 306 142 73 chr17 84948584 84948762 -4555791 - L3 LINE CR1 -307 1270 1106 3405 117 50 4 chr17 84948762 84949266 -4555287 - MER1A DNA MER1_type 0 527 1 286 306 142 73 chr17 84949266 84949356 -4555197 - L3 LINE CR1 -471 1106 1024 2561 171 76 12 chr17 84949356 84949840 -4554713 - MLT2B2 LTR ERVL 0 515 1 286 306 142 73 chr17 84949840 84949887 -4554666 - L3 LINE CR1 -553 1024 932 1251 238 129 27 chr17 84950084 84950495 -4554058 - LTR16C LTR ERVL -3 488 36 919 145 7 13 chr17 84952029 84952181 -4552372 + FAM SINE Alu 5 155 -30 184 194 65 0 chr17 84952228 84952290 -4552263 + (CATG)n Simple_repeat Simple_repeat 4 69 0 448 261 6 6 chr17 84952326 84952506 -4552047 + (CA)n Simple_repeat Simple_repeat 1 180 0 376 283 6 6 chr17 84952537 84952717 -4551836 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 261 0 22 chr17 84952748 84952932 -4551621 + (CA)n Simple_repeat Simple_repeat 1 180 0 433 253 11 0 chr17 84952951 84953129 -4551424 + (CA)n Simple_repeat Simple_repeat 1 180 0 288 0 0 0 chr17 84955167 84955199 -4549354 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 226 208 21 0 chr17 84955203 84955251 -4549302 - L2 LINE L2 -13 3259 3211 476 214 45 0 chr17 84956631 84956743 -4547810 - MIR SINE MIR -115 147 31 308 358 77 33 chr17 84957259 84957533 -4547020 + L2 LINE L2 2946 3231 -41 2000 124 0 0 chr17 84958118 84958408 -4546145 - AluSx SINE Alu -22 290 1 181 277 0 0 chr17 84958532 84958579 -4545974 - MIR SINE MIR -63 145 99 228 277 0 0 chr17 84958974 84959039 -4545514 + (TG)n Simple_repeat Simple_repeat 1 65 0 558 239 61 44 chr17 84959263 84959443 -4545110 + MLT1G LTR MaLR 408 590 0 1967 143 0 6 chr17 84959734 84960048 -4544505 - AluJb SINE Alu 0 312 1 241 331 52 15 chr17 84960203 84960339 -4544214 + MLT1I LTR MaLR 57 197 -212 667 273 82 55 chr17 84960597 84961216 -4543337 - L1MEc LINE L1 -4134 2262 1627 23 68 0 0 chr17 84961397 84961441 -4543112 + AT_rich Low_complexity Low_complexity 1 44 0 1144 219 97 122 chr17 84961671 84962102 -4542451 - L1ME3A LINE L1 -5 6165 5748 2146 105 6 10 chr17 84962102 84962415 -4542138 - AluSx SINE Alu 0 312 1 1144 219 97 122 chr17 84962415 84962518 -4542035 - L1ME3A LINE L1 -422 5748 5644 451 316 84 9 chr17 84962521 84962744 -4541809 - L1MEc LINE L1 -4760 1636 1378 441 0 0 0 chr17 84962744 84962793 -4541760 + (TG)n Simple_repeat Simple_repeat 2 50 0 451 316 84 9 chr17 84962793 84962904 -4541649 - L1MEc LINE L1 -5018 1378 1277 348 257 155 26 chr17 85163098 85163324 -4341229 + L1ME4a LINE L1 5758 6012 -109 2180 98 0 3 chr17 85164251 85164546 -4340007 - AluY SINE Alu -17 294 1 2867 172 14 60 chr17 85164547 85165210 -4339343 + LTR8 LTR ERV1 60 691 0 719 151 0 43 chr17 85165975 85166161 -4338392 + CT-rich Low_complexity Low_complexity 1 178 0 1779 140 20 14 chr17 85166165 85166457 -4338096 - AluSx SINE Alu -1 311 18 318 106 0 91 chr17 85167010 85167076 -4337477 + AluSp/q SINE Alu 239 298 -5 180 0 0 0 chr17 85168147 85168167 -4336386 + (A)n Simple_repeat Simple_repeat 1 20 0 1830 144 3 37 chr17 85169216 85169239 -4335314 - AluJo SINE Alu -20 292 270 1977 115 35 3 chr17 85169239 85169526 -4335027 + AluSx SINE Alu 1 296 -16 1830 144 3 37 chr17 85169526 85169800 -4334753 - AluJo SINE Alu -42 270 5 569 136 0 0 chr17 85169920 85170001 -4334552 + AluJ/FRAM SINE Alu 216 296 -16 192 325 125 0 chr17 85170115 85170195 -4334358 + MIR SINE MIR 96 185 -77 250 204 287 19 chr17 85170241 85170349 -4334204 + MER5A DNA MER1_type 46 182 -7 2172 104 0 28 chr17 85171030 85171369 -4333184 + AluSx SINE Alu 1 312 0 2350 83 3 0 chr17 85172133 85172434 -4332119 + AluSx SINE Alu 3 304 -8 1496 216 61 72 chr17 85173020 85173492 -4331061 + MLT1C LTR MaLR 1 467 0 191 292 42 14 chr17 85173778 85173850 -4330703 - MIR SINE MIR -64 198 125 189 352 33 0 chr17 85174280 85174371 -4330182 - L2 LINE L2 -20 3293 3200 2206 93 3 10 chr17 85175962 85176263 -4328290 + AluSx SINE Alu 1 299 -13 757 245 78 10 chr17 85176443 85176651 -4327902 - MIR SINE MIR -1 261 41 315 237 26 0 chr17 85176753 85176829 -4327724 + L2 LINE L2 3195 3272 0 274 294 83 46 chr17 85177024 85177133 -4327420 + L2 LINE L2 3155 3267 -5 2316 95 16 0 chr17 85177296 85177600 -4326953 - AluSc SINE Alu 0 309 1 1540 169 7 14 chr17 85177601 85177879 -4326674 - AluJb SINE Alu 0 312 37 228 304 38 13 chr17 85177903 85177982 -4326571 - MIR SINE MIR -67 141 61 1310 127 0 0 chr17 85178860 85179041 -4325512 - AluJo SINE Alu -131 181 1 1940 168 0 0 chr17 85179268 85179578 -4324975 - AluJo SINE Alu 0 312 3 416 250 18 73 chr17 85179594 85179758 -4324795 - MIR3 SINE MIR -43 165 11 24 93 0 0 chr17 85180643 85180697 -4323856 + GC_rich Low_complexity Low_complexity 1 54 0 216 97 0 0 chr17 85181057 85181088 -4323465 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 190 224 0 20 chr17 85181354 85181403 -4323150 - MIR3 SINE MIR -45 163 116 2053 124 20 0 chr17 85181754 85182060 -4322493 + AluSx SINE Alu 1 312 0 202 75 75 0 chr17 85182060 85182100 -4322453 + GA-rich Low_complexity Low_complexity 1 43 0 195 184 26 0 chr17 85182265 85182303 -4322250 - MER5A DNA MER1_type 0 189 151 2012 126 0 0 chr17 85183251 85183537 -4321016 - AluSx SINE Alu -26 286 1 2239 68 0 42 chr17 85183733 85184044 -4320509 - AluSc SINE Alu -10 299 2 294 330 29 43 chr17 85184130 85184339 -4320214 - MIR SINE MIR -46 216 11 2043 114 3 26 chr17 85185422 85185730 -4318823 - AluSx SINE Alu -11 301 1 1575 163 0 57 chr17 85185816 85185970 -4318583 - AluJo SINE Alu -28 284 154 2151 114 0 0 chr17 85185970 85186260 -4318293 - AluSx SINE Alu -22 290 1 1575 163 0 57 chr17 85186260 85186405 -4318148 - AluJo SINE Alu -158 154 2 598 141 40 10 chr17 85187408 85187507 -4317046 - AluJo SINE Alu -175 137 36 597 64 0 0 chr17 85188112 85188190 -4316363 + (ATG)n Simple_repeat Simple_repeat 2 79 0 1773 154 25 0 chr17 85188195 85188475 -4316078 - AluSx SINE Alu -25 287 1 2200 85 3 3 chr17 85188475 85188770 -4315783 - AluSp SINE Alu -18 295 1 1910 154 7 0 chr17 85188770 85189069 -4315484 - AluJo SINE Alu -11 301 1 1189 147 22 52 chr17 85189584 85189816 -4314737 - AluJo SINE Alu -87 225 1 1531 113 131 39 chr17 85190218 85190364 -4314189 - AluSg SINE Alu -1 309 178 2093 103 7 7 chr17 85190364 85190656 -4313897 - AluSg SINE Alu -18 292 1 1531 113 131 39 chr17 85190656 85190792 -4313761 - AluSg SINE Alu -132 178 1 2052 130 0 7 chr17 85190794 85191087 -4313466 - AluSx SINE Alu -21 291 1 21 0 0 0 chr17 85191928 85191949 -4312604 + GC_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr17 85194034 85194065 -4310488 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 2197 126 0 0 chr17 85194853 85195163 -4309390 - AluSg SINE Alu 0 310 1 318 294 264 15 chr17 85195907 85196172 -4308381 - L2 LINE L2 -1 3271 2941 2446 55 0 10 chr17 85196656 85196964 -4307589 - AluY SINE Alu -6 305 1 1921 95 78 3 chr17 85197261 85197544 -4307009 - AluSp SINE Alu -7 306 3 2106 111 3 13 chr17 85199135 85199307 -4305246 - AluSg SINE Alu -7 303 134 2185 106 0 3 chr17 85199307 85199610 -4304943 - AluY SINE Alu -9 302 1 2106 111 3 13 chr17 85199610 85199743 -4304810 - AluSg SINE Alu -176 134 1 2040 129 0 3 chr17 85200255 85200541 -4304012 - AluSx SINE Alu -27 285 1 1196 234 57 13 chr17 85201184 85201483 -4303070 + MER58B DNA MER1_type 27 338 -3 2242 81 7 0 chr17 85201940 85202235 -4302318 - AluSp SINE Alu -16 297 1 212 302 0 0 chr17 85202355 85202408 -4302145 - L2 LINE L2 0 3313 3261 246 188 31 47 chr17 85202991 85203055 -4301498 - MLT1L LTR MaLR 0 615 553 721 157 16 8 chr17 85203058 85203179 -4301374 + FLAM_A SINE Alu 1 122 -11 337 280 15 85 chr17 85203433 85203633 -4300920 - MLT1K LTR MaLR -393 195 10 255 360 175 0 chr17 85204232 85204421 -4300132 - MIR SINE MIR -6 256 35 2181 96 10 0 chr17 85204605 85204897 -4299656 + AluSx SINE Alu 1 295 -17 430 267 46 28 chr17 85205942 85206134 -4298419 - L1MCa LINE L1 -2876 3550 3363 1838 143 0 20 chr17 85206134 85206428 -4298125 - AluSq SINE Alu -25 288 1 406 288 0 40 chr17 85206428 85206553 -4298000 - L1M4 LINE L1 -3002 3144 3025 367 275 42 8 chr17 85206879 85206999 -4297554 - L1ME3A LINE L1 -138 6032 5909 1581 149 19 0 chr17 85207956 85208217 -4296336 - AluSx SINE Alu -8 304 39 2096 106 3 0 chr17 85208353 85208636 -4295917 - AluSp SINE Alu -29 284 1 2165 113 0 0 chr17 85208679 85208972 -4295581 - AluSg SINE Alu -17 293 1 180 0 0 0 chr17 85209638 85209658 -4294895 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 292 268 39 85 chr17 85209675 85209711 -4294842 - MER5B DNA MER1_type -32 146 110 2415 66 0 7 chr17 85209711 85210012 -4294541 + AluY SINE Alu 1 299 -12 292 268 39 85 chr17 85210012 85210128 -4294425 - MER5B DNA MER1_type -68 110 1 2128 133 0 0 chr17 85210544 85210853 -4293700 - AluSg SINE Alu -1 309 1 670 307 112 24 chr17 85210921 85211260 -4293293 - L2 LINE L2 -5 3308 2940 601 108 0 10 chr17 85211984 85212086 -4292467 - FRAM SINE Alu -2 174 74 2297 88 0 3 chr17 85215430 85215725 -4288828 + AluSq SINE Alu 1 294 -19 2333 83 7 0 chr17 85216746 85217047 -4287506 - AluSx SINE Alu -9 303 1 265 270 122 86 chr17 85217241 85217775 -4286778 - L1ME3A LINE L1 -213 5908 5356 1608 164 14 17 chr17 85217835 85218128 -4286425 - AluJb SINE Alu -20 292 1 257 232 84 42 chr17 85219602 85219697 -4284856 - HAL1 LINE L1 -100 2407 2309 293 262 47 40 chr17 85219728 85219877 -4284676 - L1MC5 LINE L1 -282 7679 7530 25 0 0 0 chr17 85220716 85220741 -4283812 + GC_rich Low_complexity Low_complexity 1 25 0 1861 136 20 0 chr17 85222325 85222619 -4281934 + AluSq SINE Alu 1 300 -13 229 306 81 8 chr17 85222956 85223080 -4281473 - MER5A DNA MER1_type -18 171 39 242 159 0 0 chr17 85224869 85224913 -4279640 - Charlie5 DNA MER1_type -56 2556 2513 2020 120 10 13 chr17 85225199 85225500 -4279053 - AluSx SINE Alu -12 300 1 1834 149 0 3 chr17 85225512 85225800 -4278753 - AluJo SINE Alu -25 287 1 1694 148 16 35 chr17 85226513 85226861 -4277692 + AluJb SINE Alu 1 312 0 243 292 83 0 chr17 85227455 85227551 -4277002 - MIR SINE MIR -75 133 30 187 390 0 0 chr17 85227843 85227902 -4276651 - MIR SINE MIR -77 185 127 561 99 0 0 chr17 85228545 85228626 -4275927 + (GGGA)n Simple_repeat Simple_repeat 4 84 0 226 330 22 22 chr17 85230183 85230274 -4274279 - MER5C DNA MER1_type -23 301 211 233 383 52 0 chr17 85230302 85230417 -4274136 - MER5C DNA MER1_type -200 124 4 2072 113 0 3 chr17 85230776 85231068 -4273485 + AluSq SINE Alu 1 291 -22 1782 122 0 4 chr17 85231230 85231506 -4273047 + AluSx SINE Alu 38 312 0 1095 81 0 0 chr17 85233148 85233284 -4271269 - AluSq/x SINE Alu -177 136 1 2620 185 40 87 chr17 85233812 85234151 -4270402 - L1MB5 LINE L1 -13 6161 5808 2336 92 0 0 chr17 85234151 85234455 -4270098 - AluSx SINE Alu -8 304 1 1235 195 119 8 chr17 85234459 85234720 -4269833 - AluJb SINE Alu -22 290 1 2057 134 3 10 chr17 85234730 85235044 -4269509 - AluJb SINE Alu 0 312 1 2620 185 40 87 chr17 85235044 85235493 -4269060 - L1MB5 LINE L1 -378 5796 5395 2007 125 7 0 chr17 85236294 85236581 -4267972 + AluSx SINE Alu 7 295 -17 280 277 0 0 chr17 85237214 85237279 -4267274 - MER63 DNA MER1_type -321 740 676 1955 129 41 0 chr17 85238028 85238323 -4266230 - AluJb SINE Alu -5 307 1 289 252 98 16 chr17 85238853 85238976 -4265577 + MIR SINE MIR 20 152 -110 27 0 0 0 chr17 85239054 85239081 -4265472 + GC_rich Low_complexity Low_complexity 1 27 0 251 203 27 27 chr17 85239686 85239760 -4264793 + GA-rich Low_complexity Low_complexity 1 74 0 2031 94 0 14 chr17 85240373 85240648 -4263905 + AluSx SINE Alu 1 271 -41 2081 113 0 0 chr17 85240781 85241063 -4263490 + AluSq SINE Alu 1 282 -31 234 0 0 0 chr17 85241067 85241093 -4263460 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2251 97 3 0 chr17 85241248 85241559 -4262994 + AluSx SINE Alu 1 312 0 188 348 153 0 chr17 85241696 85241814 -4262739 + L2 LINE L2 2851 2986 -327 242 221 25 66 chr17 85242175 85242297 -4262256 + (CCCCG)n Simple_repeat Simple_repeat 1 117 0 239 263 12 50 chr17 85244164 85244244 -4260309 + MLT1K LTR MaLR 300 376 -212 299 225 162 40 chr17 85244328 85244501 -4260052 + MLT1K LTR MaLR 395 588 0 592 329 59 0 chr17 85244577 85244796 -4259757 + MIR SINE MIR 10 241 -21 1919 143 42 0 chr17 85244972 85245258 -4259295 - AluSx SINE Alu -14 298 1 1486 186 54 26 chr17 85246095 85246482 -4258071 + MLT1C LTR MaLR 53 450 -17 262 391 114 3 chr17 85246855 85247213 -4257340 + L2 LINE L2 1817 2214 -1100 300 172 0 0 chr17 85247249 85247307 -4257246 + (TGGG)n Simple_repeat Simple_repeat 3 60 0 182 360 104 48 chr17 85247806 85248056 -4256497 + L2 LINE L2 3005 3268 -4 2330 92 3 0 chr17 85250291 85250597 -4253956 - AluSq SINE Alu -6 307 1 2187 113 0 0 chr17 85252885 85253185 -4251368 - AluSq SINE Alu -13 300 1 380 139 14 14 chr17 85253607 85253679 -4250874 - L1MD2 LINE L1 -1 6358 6287 760 121 121 0 chr17 85253679 85253795 -4250758 + FLAM_C SINE Alu 3 132 -11 469 283 41 46 chr17 85253814 85254033 -4250520 - L1MD1 LINE L1 -53 6189 5972 1191 219 50 112 chr17 85254144 85254516 -4250037 - L1MB5 LINE L1 -88 6086 5693 2161 135 0 0 chr17 85254516 85254827 -4249726 - AluSx SINE Alu -1 311 1 1481 205 42 0 chr17 85254827 85255110 -4249443 - AluJo SINE Alu -17 295 1 1191 219 50 112 chr17 85255110 85255238 -4249315 - L1MB5 LINE L1 -479 5695 5616 237 161 0 54 chr17 85255717 85255773 -4248780 + AluJo SINE Alu 85 137 -165 2241 102 0 28 chr17 85255773 85256095 -4248458 + AluSp SINE Alu 1 313 0 1463 158 13 93 chr17 85256101 85256412 -4248141 + AluJo SINE Alu 1 286 -26 1845 179 125 3 chr17 85256494 85256847 -4247706 + MSTD LTR MaLR 1 396 0 379 280 0 0 chr17 85257180 85257273 -4247280 - MER5A DNA MER1_type -83 106 14 1798 108 51 44 chr17 85257563 85257859 -4246694 - AluSx SINE Alu -14 298 1 456 285 50 59 chr17 85260156 85260812 -4243741 + L1MC4 LINE L1 5695 6049 -1993 1557 204 50 23 chr17 85260213 85260339 -4244214 + L1MB5 LINE L1 5750 5871 -303 2262 94 0 0 chr17 85260339 85260638 -4243915 + AluSx SINE Alu 1 299 -13 1557 204 50 23 chr17 85260638 85260908 -4243645 + L1MB5 LINE L1 5871 6157 -17 1706 151 0 64 chr17 85261578 85261889 -4242664 - AluJb SINE Alu -19 293 3 2027 138 0 0 chr17 85262798 85263087 -4241466 - AluSx SINE Alu -17 295 7 2036 101 7 10 chr17 85263214 85263510 -4241043 - AluSx SINE Alu -17 295 1 2241 110 3 0 chr17 85263901 85264210 -4240343 + AluSx SINE Alu 1 310 -2 2125 101 0 0 chr17 85264972 85265249 -4239304 + AluSx SINE Alu 1 277 -35 410 200 138 21 chr17 85265355 85265500 -4239053 + Charlie5 DNA MER1_type 2352 2552 -60 297 125 0 0 chr17 85265507 85265555 -4238998 - AluJb SINE Alu -177 125 78 1221 120 10 45 chr17 85265555 85265611 -4238942 - AluSx SINE Alu -119 193 137 2257 96 7 0 chr17 85265611 85265913 -4238640 - AluSq SINE Alu -9 304 1 1221 120 10 45 chr17 85265913 85266056 -4238497 - AluSx SINE Alu -175 137 1 259 191 11 101 chr17 85266059 85266148 -4238405 + Charlie5 DNA MER1_type 2504 2584 -28 340 284 28 0 chr17 85267216 85267325 -4237228 - MIR SINE MIR -143 119 8 366 290 0 0 chr17 85268268 85268406 -4236147 + (TG)n Simple_repeat Simple_repeat 2 139 0 337 280 21 0 chr17 85269177 85269270 -4235283 - MER5A DNA MER1_type -88 101 7 1222 169 0 5 chr17 85269926 85270127 -4234426 + AluJo SINE Alu 86 285 -27 224 351 80 20 chr17 85271109 85271260 -4233293 + MIR SINE MIR 87 246 -16 198 191 0 0 chr17 85271272 85271314 -4233239 + (CA)n Simple_repeat Simple_repeat 2 43 0 186 291 13 13 chr17 85271388 85271539 -4233014 + (CATATA)n Simple_repeat Simple_repeat 4 154 0 2185 114 0 3 chr17 85272217 85272514 -4232039 - AluSx SINE Alu -16 296 1 348 196 11 22 chr17 85272808 85272900 -4231653 - MER96B DNA MER1_type? -241 176 86 * 564 155 10 165 chr17 85272818 85272900 -4231653 + MER96B DNA MER1_type? 250 286 -131 9830 40 13 114 chr17 85272900 85274411 -4230142 + SVA Other Other 28 1386 0 564 155 10 165 chr17 85274411 85274522 -4230031 + MER96B DNA MER1_type? 286 413 -4 1937 125 7 0 chr17 85275720 85275999 -4228554 + AluSq SINE Alu 32 312 -1 26 0 0 0 chr17 85276112 85276138 -4228415 + AT_rich Low_complexity Low_complexity 1 26 0 917 140 63 43 chr17 85276142 85276349 -4228204 - MER2 DNA MER2_type -134 211 1 1187 93 0 0 chr17 85276925 85277075 -4227478 - AluSg/x SINE Alu -20 292 143 2444 84 0 0 chr17 85277083 85277394 -4227159 - AluY SINE Alu 0 311 1 853 181 0 0 chr17 85277421 85277554 -4226999 + FLAM_C SINE Alu 1 133 0 1011 207 24 5 chr17 85277598 85277811 -4226742 + L1MB3 LINE L1 5713 5929 -254 1685 168 68 51 chr17 85280329 85280568 -4223985 - MLT1A1 LTR MaLR -3 362 114 2218 128 0 0 chr17 85280568 85280880 -4223673 + AluSx SINE Alu 1 312 0 1685 168 68 51 chr17 85280880 85280992 -4223561 - MLT1A1 LTR MaLR -251 114 5 491 196 47 39 chr17 85281018 85281063 -4223490 - L1MC/D LINE L1 -805 5831 5788 1763 155 0 29 chr17 85281063 85281372 -4223181 - AluJo SINE Alu -2 310 11 491 196 47 39 chr17 85281372 85281505 -4223048 - L1MC/D LINE L1 -848 5788 5650 1705 106 117 8 chr17 85281582 85281847 -4222706 + AluSg1 SINE Alu 1 294 -15 1976 149 0 9 chr17 85281850 85282165 -4222388 + AluJo SINE Alu 1 312 0 2917 234 68 54 chr17 85282863 85283010 -4221543 - L1MC/D LINE L1 -846 5694 5551 2120 117 3 0 chr17 85283010 85283301 -4221252 - AluSx SINE Alu -20 292 1 2917 234 68 54 chr17 85283301 85283585 -4220968 - L1MC/D LINE L1 -989 5551 5273 2196 111 0 0 chr17 85283585 85283882 -4220671 - AluSq SINE Alu -16 297 1 2917 234 68 54 chr17 85283882 85284880 -4219673 - L1MC/D LINE L1 -1267 5273 4243 2203 105 0 7 chr17 85284882 85285178 -4219375 - AluSx SINE Alu -18 294 1 4044 224 64 32 chr17 85285187 85285808 -4218745 - L1MDa LINE L1 -2643 3897 3298 2475 71 0 0 chr17 85285808 85286119 -4218434 - AluY SINE Alu 0 311 1 4044 224 64 32 chr17 85286119 85287148 -4217405 - L1MDa LINE L1 -3242 3298 2194 300 271 37 47 chr17 85287149 85287256 -4217297 - L1MDa LINE L1 -6294 249 144 405 184 0 46 chr17 85287432 85287519 -4217034 + AluJb SINE Alu 212 294 -18 2386 70 0 19 chr17 85287524 85287839 -4216714 + AluY SINE Alu 1 309 -2 210 199 10 171 chr17 85289913 85290040 -4214513 + MIR SINE MIR 12 121 -87 2090 107 4 0 chr17 85290213 85290493 -4214060 + AluSx SINE Alu 14 294 -18 186 133 0 0 chr17 85292352 85292382 -4212171 + (AGGGGG)n Simple_repeat Simple_repeat 5 34 0 237 176 104 128 chr17 85292497 85292622 -4211931 - MER5A DNA MER1_type -67 122 1 2243 85 7 0 chr17 85292812 85293147 -4211406 - AluSp SINE Alu 0 337 1 359 226 0 49 chr17 85293930 85294032 -4210521 + L1MD1 LINE L1 5795 5891 -351 2244 73 0 3 chr17 85294036 85294323 -4210230 + AluY SINE Alu 1 286 -25 273 208 0 0 chr17 85294431 85294484 -4210069 - MER45 DNA AcHobo -987 53 1 2210 125 0 0 chr17 85295059 85295364 -4209189 + AluSx SINE Alu 1 305 -7 221 220 17 34 chr17 85296283 85296342 -4208211 + (ATGGTG)n Simple_repeat Simple_repeat 4 61 0 258 193 0 0 chr17 85296363 85296420 -4208133 + (ATGGTG)n Simple_repeat Simple_repeat 1 57 0 887 169 6 0 chr17 85296455 85296627 -4207926 + (ATGGTG)n Simple_repeat Simple_repeat 5 177 0 389 262 81 13 chr17 85296639 85296788 -4207765 - MIR SINE MIR -12 250 92 2159 107 7 7 chr17 85296814 85297122 -4207431 + AluSg SINE Alu 1 308 -2 253 296 292 4 chr17 85297122 85297348 -4207205 + L2 LINE L2 3013 3303 -10 * 258 357 24 0 chr17 85297347 85297431 -4207122 - MIR SINE MIR -161 101 16 2561 49 0 0 chr17 85300922 85301229 -4203324 - AluY SINE Alu -4 307 1 182 83 0 111 chr17 85302167 85302239 -4202314 + (CCCTAA)n Simple_repeat Simple_repeat 1 64 0 950 172 0 22 chr17 85302799 85302979 -4201574 + FRAM SINE Alu 1 176 0 21 0 0 0 chr17 85303396 85303417 -4201136 + AT_rich Low_complexity Low_complexity 1 21 0 233 151 0 19 chr17 85303733 85303786 -4200767 - L1MB4 LINE L1 0 6180 6129 1302 117 0 0 chr17 85303788 85303968 -4200585 - AluSg/x SINE Alu -15 295 116 241 116 0 0 chr17 85304068 85304111 -4200442 + Alu SINE Alu 259 301 -1 534 230 126 79 chr17 85304129 85304407 -4200146 - L1MD2 LINE L1 -140 6219 5929 21 26 0 26 chr17 85304473 85304484 -4200069 + AT_rich Low_complexity Low_complexity 1 11 -27 1944 163 0 0 chr17 85304484 85304785 -4199768 - AluSx SINE Alu -11 301 1 21 26 0 26 chr17 85304785 85304812 -4199741 + AT_rich Low_complexity Low_complexity 11 38 0 1193 156 28 9 chr17 85304966 85305178 -4199375 - AluJo SINE Alu -12 300 85 1622 121 40 11 chr17 85305650 85305923 -4198630 - AluSx SINE Alu -8 304 24 1975 229 28 26 chr17 85307721 85308042 -4196511 - L1 LINE L1 -3467 2679 2355 2382 76 3 0 chr17 85308042 85308344 -4196209 - AluY SINE Alu -8 303 1 1975 229 28 26 chr17 85308344 85308563 -4195990 - L1 LINE L1 -3791 2355 2138 2221 158 72 44 chr17 85308577 85309101 -4195452 + MER74A LTR ERVL 20 558 0 1330 107 81 0 chr17 85309565 85309762 -4194791 - 7SLRNA srpRNA srpRNA -107 213 1 402 266 96 35 chr17 85310039 85310238 -4194315 - L2 LINE L2 -216 3056 2846 393 231 19 48 chr17 85310241 85310345 -4194208 - MLT1K LTR MaLR -11 577 477 916 185 83 103 chr17 85310349 85310395 -4194158 + MER74B LTR ERVL 56 101 -521 2202 115 0 3 chr17 85310395 85310692 -4193861 - AluSx SINE Alu -18 294 1 916 185 83 103 chr17 85310692 85310705 -4193848 + MER74B LTR ERVL 101 113 -509 22 0 0 0 chr17 85310705 85310727 -4193826 + AT_rich Low_complexity Low_complexity 1 22 0 916 185 83 103 chr17 85310727 85310938 -4193615 + MER74B LTR ERVL 113 342 -280 245 314 0 0 chr17 85312191 85312261 -4192292 + (CA)n Simple_repeat Simple_repeat 1 70 0 2305 85 0 42 chr17 85312864 85313170 -4191383 + AluSc SINE Alu 1 293 -16 1298 172 0 18 chr17 85313173 85313394 -4191159 + AluJb SINE Alu 73 289 -23 2510 61 3 13 chr17 85313600 85313910 -4190643 + AluY SINE Alu 1 307 -4 316 232 105 21 chr17 85314442 85314537 -4190016 + MIR SINE MIR 47 149 -113 2398 90 13 7 chr17 85314563 85314873 -4189680 + AluSq SINE Alu 1 312 -1 2296 127 0 0 chr17 85315657 85315965 -4188588 + AluSg1 SINE Alu 1 308 -1 279 280 27 0 chr17 85316230 85316305 -4188248 + MER81 DNA DNA 1 77 -37 275 340 61 75 chr17 85316747 85317041 -4187512 + L2 LINE L2 2956 3245 -27 1034 151 236 4 chr17 85317177 85317402 -4187151 - AluJo SINE Alu -34 278 2 257 307 28 34 chr17 85317467 85317643 -4186910 - L1 LINE L1 -867 5279 5105 243 261 18 109 chr17 85317956 85318121 -4186432 - MER69A DNA AcHobo -24 153 4 1165 71 0 0 chr17 85318437 85318578 -4185975 - AluSg/x SINE Alu -2 310 170 2408 82 3 0 chr17 85319242 85319533 -4185020 + AluSp SINE Alu 5 296 -17 1191 121 0 6 chr17 85319682 85319847 -4184706 - AluSg/x SINE Alu -12 300 137 264 229 96 0 chr17 85319989 85320072 -4184481 - MIR SINE MIR -118 144 54 264 229 96 0 chr17 85320285 85320368 -4184185 - MIR SINE MIR -118 144 54 1442 211 46 70 chr17 85321747 85321960 -4182593 + L1MB7 LINE L1 5690 5907 -277 1703 210 117 8 chr17 85321960 85322446 -4182107 + MER34 LTR ERV1 3 541 -1 1442 211 46 70 chr17 85322446 85322625 -4181928 + L1MB7 LINE L1 5907 6070 -114 1494 128 42 116 chr17 85322625 85322807 -4181746 - AluJo SINE Alu -1 311 164 2272 108 0 3 chr17 85322807 85323103 -4181450 - AluSg SINE Alu -15 295 1 1494 128 42 116 chr17 85323103 85323256 -4181297 - AluJo SINE Alu -148 164 1 1442 211 46 70 chr17 85323256 85323359 -4181194 + L1MB7 LINE L1 6070 6174 -10 180 77 0 0 chr17 85323359 85323385 -4181168 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 2335 111 0 0 chr17 85323742 85324049 -4180504 + AluSx SINE Alu 6 312 0 236 268 82 0 chr17 85324473 85324570 -4179983 + MIR SINE MIR 60 164 -98 1125 225 79 62 chr17 85324574 85324955 -4179598 + MLT1C LTR MaLR 6 398 -69 2189 105 31 0 chr17 85324955 85325241 -4179312 - AluSx SINE Alu -13 299 5 1125 225 79 62 chr17 85325241 85325313 -4179240 + MLT1C LTR MaLR 398 467 0 828 173 59 98 chr17 85326314 85326497 -4178056 + MER34B LTR ERV1 11 183 -382 2320 107 10 7 chr17 85326497 85326805 -4177748 + AluSx SINE Alu 1 309 -3 828 173 59 98 chr17 85326805 85326876 -4177677 + MER34B LTR ERV1 183 255 -310 2290 123 76 8 chr17 85326893 85327275 -4177278 + MER4D LTR ERV1 1 408 -495 2180 139 0 0 chr17 85327275 85327570 -4176983 - AluSx SINE Alu -14 298 4 260 204 11 80 chr17 85327583 85327671 -4176882 + MER34 LTR ERV1 460 541 -1 485 154 0 0 chr17 85327986 85328064 -4176489 - MER45A DNA AcHobo 0 178 101 2079 96 4 0 chr17 85328068 85328329 -4176224 + AluSg SINE Alu 6 267 -43 837 198 3 14 chr17 85328429 85328776 -4175777 + (CACCAT)n Simple_repeat Simple_repeat 1 343 0 276 182 0 0 chr17 85328777 85328821 -4175732 + (CAT)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr17 85329274 85329295 -4175258 + AT_rich Low_complexity Low_complexity 1 21 0 403 98 0 0 chr17 85329850 85329911 -4174642 - MER53 DNA DNA -7 182 122 270 0 0 0 chr17 85329911 85329941 -4174612 + (T)n Simple_repeat Simple_repeat 1 30 0 2323 119 0 0 chr17 85329958 85330269 -4174284 + AluSx SINE Alu 1 311 -1 352 163 120 0 chr17 85330272 85330364 -4174189 + MER53 DNA DNA 87 189 0 607 90 0 3 chr17 85330764 85330986 -4173567 - AluY SINE Alu -14 297 1 2143 82 4 4 chr17 85330999 85331269 -4173284 - AluY SINE Alu -17 294 25 329 305 59 0 chr17 85331366 85331484 -4173069 + MIR SINE MIR 20 144 -118 2168 107 6 64 chr17 85331692 85332020 -4172533 - AluSx SINE Alu -3 309 1 722 195 54 70 chr17 85332417 85332658 -4171895 - L1ME2 LINE L1 -243 5921 5685 1079 210 13 0 chr17 85332835 85333059 -4171494 - MLT1D LTR MaLR -2 503 277 370 111 0 0 chr17 85333061 85333115 -4171438 - MLT2B1 LTR ERVL 0 554 501 281 222 0 11 chr17 85333124 85333214 -4171339 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 1697 203 118 9 chr17 85333268 85333701 -4170852 - MLT2B1 LTR ERVL -39 481 2 254 192 121 50 chr17 85333701 85333795 -4170758 - MLT1D LTR MaLR -225 280 180 2203 122 3 0 chr17 85334338 85334632 -4169921 + AluSx SINE Alu 1 295 -17 191 252 29 58 chr17 85334740 85334843 -4169710 + L2 LINE L2 3085 3184 -129 4777 124 18 4 chr17 85334848 85335590 -4168963 + L1PA14 LINE L1 5310 6061 -100 515 262 40 16 chr17 85335649 85335899 -4168654 + MER5C DNA MER1_type 8 322 -2 439 184 0 18 chr17 85336472 85336581 -4167972 + (TGGA)n Simple_repeat Simple_repeat 3 109 0 2373 116 0 0 chr17 85337299 85337602 -4166951 - AluSq SINE Alu -10 303 1 189 0 0 0 chr17 85338269 85338290 -4166263 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 1990 126 0 11 chr17 85338294 85338436 -4166117 - AluSx SINE Alu -37 275 136 2869 23 0 0 chr17 85338436 85338744 -4165809 - AluYb8 SINE Alu -10 308 1 1990 126 0 11 chr17 85338744 85338879 -4165674 - AluSx SINE Alu -176 136 1 2602 49 3 0 chr17 85339675 85339979 -4164574 + AluY SINE Alu 1 305 -6 1293 231 46 30 chr17 85340511 85340879 -4163674 - MLT1A2 LTR MaLR 0 374 1 216 179 0 0 chr17 85341102 85341141 -4163412 + (TATG)n Simple_repeat Simple_repeat 4 42 0 951 155 0 14 chr17 85341162 85341310 -4163243 - AluJb SINE Alu -12 300 155 421 200 0 0 chr17 85341338 85341413 -4163140 - AluJ/FLAM SINE Alu -237 75 1 310 161 0 16 chr17 85341418 85341480 -4163073 - MER116 DNA Mariner -18 62 2 2107 147 3 0 chr17 85341811 85342110 -4162443 + AluSx SINE Alu 1 300 -12 286 330 106 12 chr17 85342320 85342684 -4161869 - HAL1b LINE L1 -625 1734 309 2337 110 0 0 chr17 85342805 85343105 -4161448 - AluSx SINE Alu -12 300 1 2618 63 0 0 chr17 85343390 85343691 -4160862 - AluY SINE Alu -10 301 1 838 213 36 94 chr17 85344275 85344552 -4160001 + MLT1A2 LTR MaLR 1 261 -113 2001 176 24 0 chr17 85345557 85345938 -4158615 + MLT1B LTR MaLR 1 390 0 230 348 44 0 chr17 85345988 85346123 -4158430 + HAL1b LINE L1 509 649 -699 1034 113 0 0 chr17 85346124 85346257 -4158296 + AluSq/x SINE Alu 1 133 -180 2234 120 0 3 chr17 85346869 85347169 -4157384 + AluSg SINE Alu 1 299 -11 2288 131 36 68 chr17 85348082 85348477 -4156076 + MSTA LTR MaLR 1 382 -46 2169 108 0 0 chr17 85348477 85348754 -4155799 - AluSx SINE Alu 0 312 36 2288 131 36 68 chr17 85348754 85348800 -4155753 + MSTA LTR MaLR 382 428 0 262 167 19 0 chr17 85348971 85349025 -4155528 + MADE1 DNA Mariner 2 56 -24 814 167 0 0 chr17 85349150 85349282 -4155271 - FLAM_C SINE Alu -1 132 1 561 189 0 0 chr17 85349381 85349476 -4155077 + AluSq/x SINE Alu 37 131 -181 1575 300 84 52 chr17 85349576 85350924 -4153629 + L2 LINE L2 1926 3313 0 420 202 22 0 chr17 85351750 85351839 -4152714 + MER89 LTR ERV1 5 95 -464 1541 150 0 114 chr17 85352990 85353323 -4151230 + AluJb SINE Alu 1 295 -7 311 95 0 0 chr17 85354213 85354255 -4150298 + AluJ/FLAM SINE Alu 18 59 -243 296 266 186 0 chr17 85355387 85355500 -4149053 - L2 LINE L2 -15 3298 3165 1329 199 45 19 chr17 85355665 85355977 -4148576 + MER31A LTR ERV1 159 478 -7 236 152 65 0 chr17 85356314 85356360 -4148193 + Alu SINE Alu 88 136 -166 2177 106 14 0 chr17 85356360 85356688 -4147865 + AluSq SINE Alu 1 332 0 1009 170 87 10 chr17 85356702 85356908 -4147645 + MLT1A1 LTR MaLR 144 365 0 859 175 7 7 chr17 85359284 85359438 -4145115 - FRAM SINE Alu -12 154 1 2417 75 0 0 chr17 85361266 85361574 -4142979 + AluSc SINE Alu 1 308 -1 200 111 83 0 chr17 85363295 85363331 -4141222 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 2249 76 13 3 chr17 85363654 85363957 -4140596 + AluSx SINE Alu 1 306 -6 799 209 46 10 chr17 85364031 85364273 -4140280 - LTR64 LTR ERVK -7 551 237 3655 167 24 54 chr17 85364273 85364437 -4140116 + MER4D LTR ERV1 4 171 -732 1756 92 0 0 chr17 85364437 85364677 -4139876 - AluY SINE Alu -1 310 71 3655 167 24 54 chr17 85364677 85364852 -4139701 + MER4D LTR ERV1 171 350 -553 2141 85 3 0 chr17 85364852 85365134 -4139419 - AluSx SINE Alu -13 299 17 3655 167 24 54 chr17 85365134 85365575 -4138978 + MER4D LTR ERV1 350 761 -142 665 83 10 0 chr17 85365575 85365671 -4138882 + MER4B LTR ERV1 1 97 -513 400 94 0 0 chr17 85365806 85365859 -4138694 - FLAM SINE Alu -17 126 74 2438 124 18 88 chr17 85365865 85366366 -4138187 + MER4B LTR ERV1 109 574 -36 678 177 43 21 chr17 85366398 85366539 -4138014 + MER4D LTR ERV1 760 903 0 1991 92 4 7 chr17 85366592 85366863 -4137690 - AluSp SINE Alu -6 307 38 333 194 69 0 chr17 85366904 85366976 -4137577 - AluS SINE Alu -223 77 1 835 169 33 22 chr17 85366977 85367161 -4137392 - LTR64 LTR ERVK -366 192 7 919 173 7 0 chr17 85367368 85367518 -4137035 - AluJb SINE Alu -19 293 143 873 218 47 5 chr17 85367771 85367964 -4136589 - MER58A DNA MER1_type 0 224 24 260 318 95 28 chr17 85367988 85368199 -4136354 + L2 LINE L2 1537 1761 -1553 579 194 31 23 chr17 85368541 85368670 -4135883 + MER4B LTR ERV1 370 499 -111 1893 97 28 123 chr17 85368901 85369291 -4135262 - LTR8 LTR ERV1 -337 354 2 1201 219 0 85 chr17 85369292 85369380 -4135173 - L1M4 LINE L1 -1370 4776 4682 2500 45 0 25 chr17 85369380 85369694 -4134859 - AluY SINE Alu 0 311 6 1201 219 0 85 chr17 85369694 85369957 -4134596 - L1M4 LINE L1 -1464 4682 4455 896 258 197 12 chr17 85369957 85369988 -4134565 + Charlie7 DNA MER1_type 1681 1705 -907 378 0 0 0 chr17 85369988 85370030 -4134523 + (CA)n Simple_repeat Simple_repeat 2 43 0 896 258 197 12 chr17 85370030 85370424 -4134129 + Charlie7 DNA MER1_type 1705 2185 -427 2053 94 29 0 chr17 85370730 85371005 -4133548 - AluSx SINE Alu -6 306 24 440 309 38 38 chr17 85371551 85371645 -4132908 + L1MEc LINE L1 2048 2141 -4255 2275 99 0 0 chr17 85371645 85371947 -4132606 + AluSp SINE Alu 1 302 -11 440 309 38 38 chr17 85371947 85372062 -4132491 + L1MEc LINE L1 2140 2257 -4139 186 167 0 0 chr17 85372079 85372115 -4132438 + G-rich Low_complexity Low_complexity 1 36 0 1793 156 0 14 chr17 85372207 85372529 -4132024 - AluJb SINE Alu 0 318 1 301 272 117 0 chr17 85373379 85373482 -4131071 + L2 LINE L2 3199 3313 0 967 170 36 27 chr17 85373619 85373842 -4130711 - MER96B DNA MER1_type? -18 399 175 2099 113 3 3 chr17 85374639 85374940 -4129613 + AluSp SINE Alu 1 301 -12 304 215 0 13 chr17 85374944 85375023 -4129530 + MER89 LTR ERV1 10 87 -472 * 832 211 48 4 chr17 85374997 85375319 -4129234 + MER89 LTR ERV1 197 557 -2 867 157 46 0 chr17 85375758 85375911 -4128642 - MER54A LTR ERVL -24 877 718 1003 113 0 7 chr17 85375911 85376053 -4128500 - AluSg SINE Alu -169 141 1 918 106 0 14 chr17 85376064 85376206 -4128347 - AluSp/q SINE Alu 0 313 174 544 253 84 17 chr17 85376207 85376385 -4128168 + Tigger8 DNA MER2_type 380 569 -97 527 255 13 13 chr17 85376444 85376593 -4127960 - MIR SINE MIR 0 262 114 287 235 0 15 chr17 85376580 85376648 -4127905 + MIR SINE MIR 137 203 -59 * 1592 238 44 54 chr17 85376657 85377146 -4127407 - MER54A LTR ERVL -189 712 16 402 242 0 0 chr17 85377201 85377296 -4127257 + MIR SINE MIR 117 211 -51 2234 105 0 0 chr17 85377296 85377600 -4126953 + AluSx SINE Alu 1 304 -8 374 100 17 0 chr17 85377603 85377663 -4126890 + (TA)n Simple_repeat Simple_repeat 2 62 0 282 270 0 0 chr17 85377663 85377752 -4126801 + L1MC4 LINE L1 6614 6702 -1340 197 259 17 35 chr17 85377752 85377810 -4126743 + MIR SINE MIR 205 261 -1 1688 166 60 30 chr17 85378328 85378434 -4126119 + MLT1B LTR MaLR 1 102 -288 1908 147 3 3 chr17 85378434 85378733 -4125820 + AluSx SINE Alu 1 299 -13 1688 166 60 30 chr17 85378733 85378958 -4125595 + MLT1B LTR MaLR 102 342 -48 360 279 76 29 chr17 85379268 85379326 -4125227 - MER5A DNA MER1_type -6 183 129 1934 123 0 49 chr17 85379326 85379650 -4124903 + AluJb SINE Alu 1 308 -4 360 279 76 29 chr17 85379650 85379763 -4124790 - MER5A DNA MER1_type -60 129 4 448 177 149 14 chr17 85380896 85381037 -4123516 + MER96B DNA MER1_type? 20 179 -238 1523 145 0 0 chr17 85382668 85382895 -4121658 - AluJo SINE Alu -32 280 54 1342 195 73 60 chr17 85382895 85383322 -4121231 + L1MB3 LINE L1 4175 4595 -1588 2403 66 0 3 chr17 85383322 85383625 -4120928 + AluY SINE Alu 1 302 -9 1342 195 73 60 chr17 85383625 85384470 -4120083 + L1MB3 LINE L1 4595 5917 -266 1342 144 58 27 chr17 85384470 85384568 -4119985 + L1MB3 LINE L1 5919 6012 -171 3905 78 59 0 chr17 85384568 85385090 -4119463 + MER41A LTR ERV1 2 554 0 1342 144 58 27 chr17 85385090 85385248 -4119305 + L1MB3 LINE L1 6012 6183 0 1342 195 73 60 chr17 85385248 85385519 -4119034 + L1MB3 LINE L1 5917 6183 0 309 217 250 0 chr17 85386125 85386277 -4118276 + LTR33A LTR ERVL 255 444 -79 840 230 166 51 chr17 85386339 85386730 -4117823 - MLT1D LTR MaLR -6 499 64 * 1021 238 72 14 chr17 85386728 85386853 -4117700 + MLT1A2 LTR MaLR 33 149 -225 1912 134 0 38 chr17 85386853 85387173 -4117380 + AluSx SINE Alu 1 308 -4 1021 238 72 14 chr17 85387173 85387337 -4117216 + MLT1A2 LTR MaLR 149 339 -35 1544 196 160 31 chr17 85387344 85387794 -4116759 + MLT2B1 LTR ERVL 5 512 -8 1958 120 28 3 chr17 85387974 85388257 -4116296 + AluSg SINE Alu 1 290 -20 414 288 12 37 chr17 85388387 85388504 -4116049 - MLT1J LTR MaLR -237 199 99 2386 153 13 71 chr17 85388504 85388705 -4115848 + MSTB LTR MaLR 1 212 -214 2026 148 0 0 chr17 85388705 85389016 -4115537 + AluSx SINE Alu 1 311 -1 2386 153 13 71 chr17 85389016 85389266 -4115287 + MSTB LTR MaLR 212 426 0 414 288 12 37 chr17 85389266 85389314 -4115239 - MLT1J LTR MaLR -337 99 51 223 294 178 62 chr17 85389399 85389750 -4114803 + L2 LINE L2 2311 2620 -694 1941 119 16 31 chr17 85389750 85390068 -4114485 + AluSq SINE Alu 1 313 0 223 294 178 62 chr17 85390068 85390283 -4114270 + L2 LINE L2 2620 2943 -371 267 308 0 0 chr17 85390284 85390349 -4114204 + (CA)n Simple_repeat Simple_repeat 1 65 0 296 299 26 0 chr17 85390629 85390706 -4113847 - MER103 DNA DNA -85 81 3 1960 133 23 7 chr17 85390734 85390755 -4113798 - AluSx SINE Alu -5 307 288 204 97 0 0 chr17 85390755 85390786 -4113767 + (TG)n Simple_repeat Simple_repeat 2 32 0 1960 133 23 7 chr17 85390786 85391066 -4113487 - AluSx SINE Alu -24 288 1 2083 173 37 3 chr17 85391066 85391447 -4113106 + MER57A LTR ERV1 1 394 -9 1457 201 33 20 chr17 85391568 85391969 -4112584 + MER61B LTR ERV1 1 1308 0 767 151 69 19 chr17 85392340 85392499 -4112054 + MER4A LTR ERV1 1 167 -497 324 164 289 19 chr17 85392495 85392599 -4111954 + MER4C LTR ERV1 303 434 -31 * 1086 171 95 71 chr17 85392738 85393014 -4111539 + MER4A LTR ERV1 157 306 -159 2003 149 0 13 chr17 85393014 85393329 -4111224 + AluSx SINE Alu 1 311 -1 1086 171 95 71 chr17 85393329 85393493 -4111060 + MER4A LTR ERV1 306 465 0 958 198 154 56 chr17 85394269 85394612 -4109941 - MER31B LTR ERV1 -50 435 46 2294 87 3 0 chr17 85394612 85394910 -4109643 + AluSx SINE Alu 1 299 -13 958 198 154 56 chr17 85394910 85394961 -4109592 - MER31B LTR ERV1 -439 46 1 541 223 178 0 chr17 85395424 85395581 -4108972 + MER5A DNA MER1_type 5 189 0 1122 197 48 22 chr17 85395676 85395945 -4108608 - AluJo SINE Alu -36 276 1 600 212 0 51 chr17 85395947 85396084 -4108469 - AluJo/FLAM SINE Alu -172 130 1 2092 98 13 31 chr17 85396817 85396828 -4107725 - AluSq SINE Alu -2 311 301 270 0 0 0 chr17 85396828 85396858 -4107695 + (TA)n Simple_repeat Simple_repeat 2 31 0 2092 98 13 31 chr17 85396858 85397163 -4107390 - AluSq SINE Alu -12 301 1 513 119 0 0 chr17 85447865 85447949 -4056604 + AluS SINE Alu 226 309 0 237 309 21 0 chr17 85450720 85450817 -4053736 + (CATATA)n Simple_repeat Simple_repeat 4 102 0 491 243 29 0 chr17 85450992 85451095 -4053458 - U6 snRNA snRNA -1 106 1 186 43 0 0 chr17 85451901 85451924 -4052629 + (A)n Simple_repeat Simple_repeat 1 23 0 423 173 0 0 chr17 85452431 85452512 -4052041 + (CA)n Simple_repeat Simple_repeat 1 81 0 228 294 157 0 chr17 85452743 85452845 -4051708 - L2 LINE L2 -1 3271 3154 2223 108 3 0 chr17 85453382 85453678 -4050875 + AluSg SINE Alu 1 297 -13 232 322 78 0 chr17 85453687 85453777 -4050776 + L1ME4a LINE L1 5814 5910 -1898 509 253 96 91 chr17 85453797 85454081 -4050472 - L1ME4a LINE L1 -2 6119 5831 1729 148 7 40 chr17 85454081 85454384 -4050169 - AluJo SINE Alu -11 301 9 509 253 96 91 chr17 85454384 85454538 -4050015 - L1ME4a LINE L1 -290 5831 5679 2365 92 3 3 chr17 85454818 85455122 -4049431 - AluSx SINE Alu -8 304 1 1807 105 4 0 chr17 85456336 85456575 -4047978 + AluSg/x SINE Alu 66 305 -5 2385 230 33 5 chr17 85456575 85457148 -4047405 - L1MB8 LINE L1 -11 6167 5579 214 233 167 0 chr17 85457205 85457265 -4047288 + MER5A DNA MER1_type 7 76 -113 226 259 25 37 chr17 85457292 85457373 -4047180 - MER5A DNA MER1_type -65 124 45 356 339 9 0 chr17 85457389 85457501 -4047052 + MER5B DNA MER1_type 66 178 0 1799 200 0 3 chr17 85457654 85457959 -4046594 - AluJo SINE Alu -6 306 3 438 234 80 7 chr17 85459114 85459251 -4045302 + L1ME4a LINE L1 5973 6119 -2 1702 216 128 40 chr17 85459267 85460206 -4044347 - L1ME2 LINE L1 -1 6163 5129 2629 47 0 0 chr17 85460822 85461118 -4043435 - AluSc SINE Alu -13 296 1 192 179 0 0 chr17 85461489 85461528 -4043025 + A-rich Low_complexity Low_complexity 2 40 0 267 307 123 0 chr17 85461550 85461664 -4042889 - L2 LINE L2 0 3313 3186 367 290 72 39 chr17 85462306 85462487 -4042066 - MIR3 SINE MIR -66 142 4 375 265 44 77 chr17 85462499 85462680 -4041873 + MIR3 SINE MIR 8 164 -44 222 220 0 51 chr17 85463190 85463249 -4041304 + MIR SINE MIR 77 132 -130 307 218 173 15 chr17 85463398 85463531 -4041022 + L1ME4a LINE L1 5966 6119 -2 485 350 51 25 chr17 85463686 85463923 -4040630 + MIR SINE MIR 20 262 0 539 219 110 47 chr17 85464018 85464120 -4040433 + MER33 DNA MER1_type 1 95 -2529 2276 82 0 0 chr17 85464120 85464447 -4040106 + AluY SINE Alu 1 327 0 539 219 110 47 chr17 85464447 85464458 -4040095 + MER33 DNA MER1_type 95 104 -2520 216 0 0 0 chr17 85464458 85464482 -4040071 + (CA)n Simple_repeat Simple_repeat 2 25 0 539 219 110 47 chr17 85464482 85464641 -4039912 + MER33 DNA MER1_type 104 359 -4 1741 167 43 10 chr17 85464944 85465243 -4039310 + AluJb SINE Alu 3 311 -1 557 170 0 7 chr17 85465243 85465390 -4039163 + GA-rich Low_complexity Low_complexity 1 146 0 2310 109 0 28 chr17 85465514 85465836 -4038717 + AluSq SINE Alu 1 313 0 30 0 0 0 chr17 85466222 85466252 -4038301 + AT_rich Low_complexity Low_complexity 1 30 0 2119 127 0 19 chr17 85466704 85467012 -4037541 + AluSx SINE Alu 1 302 -10 370 326 0 0 chr17 85467137 85467226 -4037327 + L2 LINE L2 3187 3275 -38 201 39 0 0 chr17 85467236 85467262 -4037291 + (CA)n Simple_repeat Simple_repeat 1 26 0 601 293 184 39 chr17 85467358 85467771 -4036782 + HAL1 LINE L1 719 1191 -1316 424 245 133 20 chr17 85467947 85468098 -4036455 + HAL1 LINE L1 1537 1704 -803 327 267 213 68 chr17 85468757 85469053 -4035500 + HAL1 LINE L1 2169 2507 0 450 0 0 0 chr17 85470915 85470965 -4033588 + (CA)n Simple_repeat Simple_repeat 2 51 0 284 269 201 8 chr17 85471406 85471540 -4033013 + MIR SINE MIR 91 250 -12 224 293 142 0 chr17 85471609 85471715 -4032838 - L2 LINE L2 0 3272 3152 319 228 43 43 chr17 85471846 85471938 -4032615 + MIR SINE MIR 32 123 -85 186 43 0 0 chr17 85472451 85472474 -4032079 + (A)n Simple_repeat Simple_repeat 1 23 0 1068 169 0 0 chr17 85472661 85472833 -4031720 - AluSg/x SINE Alu -4 306 135 2244 109 0 26 chr17 85473091 85473266 -4031287 - AluSx SINE Alu -7 305 127 195 42 0 0 chr17 85473266 85473290 -4031263 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2175 93 11 0 chr17 85473290 85473570 -4030983 - AluSx SINE Alu -29 283 1 2244 109 0 26 chr17 85473570 85473706 -4030847 - AluSx SINE Alu -183 129 1 269 236 11 34 chr17 85473746 85473835 -4030718 + L1MC5 LINE L1 7831 7917 -44 2557 44 0 0 chr17 85474539 85474836 -4029717 + AluY SINE Alu 1 297 -14 2254 150 71 49 chr17 85475593 85476087 -4028466 + MLT1D LTR MaLR 1 505 0 1833 112 4 0 chr17 85476144 85476386 -4028167 + AluSx SINE Alu 1 243 -69 1504 150 38 59 chr17 85476512 85476851 -4027702 - MER44D DNA MER2_type -1 608 7 2211 125 0 0 chr17 85476911 85477208 -4027345 + AluSx SINE Alu 1 297 -15 1706 118 137 0 chr17 85477281 85477543 -4027010 - AluSx SINE Alu -14 298 1 581 287 121 27 chr17 85477837 85478251 -4026302 - L2 LINE L2 -4 3309 2857 24 77 0 0 chr17 85478437 85478489 -4026064 + AT_rich Low_complexity Low_complexity 1 52 0 863 119 56 0 chr17 85479057 85479183 -4025370 + FLAM_C SINE Alu 1 133 0 410 330 72 42 chr17 85479926 85480162 -4024391 + MIR SINE MIR 2 244 -18 798 160 0 0 chr17 85480270 85480389 -4024164 + FLAM_C SINE Alu 2 120 -13 309 274 0 0 chr17 85480616 85480722 -4023831 + (TGGA)n Simple_repeat Simple_repeat 2 107 0 214 376 9 0 chr17 85480839 85480948 -4023605 - L2 LINE L2 -939 2375 2266 213 224 17 17 chr17 85481867 85481925 -4022628 + CT-rich Low_complexity Low_complexity 4 61 0 27 0 0 0 chr17 85481929 85481956 -4022597 + AT_rich Low_complexity Low_complexity 1 27 0 1927 144 31 0 chr17 85481959 85482251 -4022302 + AluSx SINE Alu 4 304 -8 265 333 96 57 chr17 85482346 85482785 -4021768 + L2 LINE L2 2816 3271 -1 2254 120 3 13 chr17 85482818 85482953 -4021600 + AluSq SINE Alu 1 136 -177 2228 125 0 0 chr17 85482953 85483258 -4021295 + AluSc SINE Alu 1 305 -4 2254 120 3 13 chr17 85483258 85483438 -4021115 + AluSq SINE Alu 136 313 0 1795 174 7 0 chr17 85483674 85483809 -4020744 + AluSx SINE Alu 1 134 -178 1999 157 3 10 chr17 85483809 85484122 -4020431 + AluSx SINE Alu 1 311 -1 1795 174 7 0 chr17 85484122 85484279 -4020274 + AluSx SINE Alu 134 295 -17 2358 117 0 0 chr17 85484279 85484588 -4019965 + AluSc SINE Alu 1 309 0 2424 101 0 0 chr17 85485357 85485664 -4018889 - AluSc SINE Alu -2 307 1 1993 136 3 14 chr17 85485666 85485961 -4018592 - AluSx SINE Alu -20 292 1 796 167 8 15 chr17 85486021 85486153 -4018400 + AluJo SINE Alu 6 136 -176 2381 82 3 0 chr17 85486176 85486470 -4018083 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr17 85486470 85486490 -4018063 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 328 315 68 7 chr17 85486957 85487103 -4017450 + L1ME LINE L1 5524 5678 -443 207 247 56 56 chr17 85487367 85487456 -4017097 - L2 LINE L2 0 3272 3184 2320 123 0 0 chr17 85488701 85489001 -4015552 + AluSx SINE Alu 1 300 -12 2353 99 0 7 chr17 85489205 85489509 -4015044 + AluSx SINE Alu 1 302 -10 2452 80 3 0 chr17 85489674 85489974 -4014579 + AluSp SINE Alu 1 301 -12 2294 58 25 0 chr17 85489974 85490292 -4014261 + AluY SINE Alu 1 325 0 1176 53 0 0 chr17 85490535 85490667 -4013886 + AluY SINE Alu 1 132 -179 1968 150 23 7 chr17 85490851 85491158 -4013395 + AluSx SINE Alu 1 312 0 2478 103 0 0 chr17 85491186 85491496 -4013057 + AluSx SINE Alu 1 310 -2 415 177 204 35 chr17 85491511 85491624 -4012929 + FLAM_C SINE Alu 1 132 -1 2474 91 3 0 chr17 85491949 85492258 -4012295 + AluSp SINE Alu 1 310 -3 2079 158 125 22 chr17 85492295 85492752 -4011801 + MLT1D LTR MaLR 1 504 -1 1383 168 45 39 chr17 85493066 85493376 -4011177 + AluJo SINE Alu 1 312 0 1417 151 148 33 chr17 85493419 85493555 -4010998 + AluJo SINE Alu 1 120 -182 2229 84 0 11 chr17 85493555 85493888 -4010665 + AluSx SINE Alu 1 330 0 1417 151 148 33 chr17 85493888 85494021 -4010532 + AluJo SINE Alu 120 302 0 24 77 0 0 chr17 85494860 85494912 -4009641 + GC_rich Low_complexity Low_complexity 1 52 0 199 84 0 95 chr17 85495143 85495238 -4009315 + (CCCCCG)n Simple_repeat Simple_repeat 4 89 0 238 291 12 42 chr17 85495242 85495407 -4009146 + C-rich Low_complexity Low_complexity 2 161 0 2320 78 14 0 chr17 85495761 85496056 -4008497 - AluSq SINE Alu -14 299 1 1851 152 3 58 chr17 85496283 85496613 -4007940 - AluJb SINE Alu 0 312 1 1643 207 7 3 chr17 85497193 85497492 -4007061 + AluJo SINE Alu 1 300 -12 1621 127 154 0 chr17 85497731 85497990 -4006563 - AluSx SINE Alu -3 299 1 1778 154 20 23 chr17 85498352 85498657 -4005896 - AluJb SINE Alu -8 304 1 2096 146 108 36 chr17 85498671 85499054 -4005499 + MER21A LTR ERV1 32 386 -545 2221 89 44 0 chr17 85499054 85499347 -4005206 + AluSq SINE Alu 1 306 -7 2096 146 108 36 chr17 85499347 85499697 -4004856 + MER21A LTR ERV1 386 931 0 2347 90 3 10 chr17 85499795 85500107 -4004446 - AluSx SINE Alu -2 310 1 328 301 66 16 chr17 85500134 85500317 -4004236 + L1MC4a LINE L1 5731 5922 -1886 1510 167 55 82 chr17 85500546 85500947 -4003606 + MLT1B LTR MaLR 1 390 0 2575 75 0 0 chr17 85500988 85501294 -4003259 - AluSc SINE Alu -3 306 1 2283 102 10 3 chr17 85501749 85502053 -4002500 + AluSq SINE Alu 1 306 -7 283 213 113 12 chr17 85502826 85502906 -4001647 - L2 LINE L2 -1 3271 3184 1829 150 38 7 chr17 85502925 85503115 -4001438 - AluSx SINE Alu -16 296 93 2193 136 0 7 chr17 85503115 85503423 -4001130 - AluSg SINE Alu -4 306 1 1829 150 38 7 chr17 85503423 85503519 -4001034 - AluSx SINE Alu -219 93 1 2245 65 58 3 chr17 85503959 85504251 -4000302 - AluSp SINE Alu -5 308 1 516 173 0 0 chr17 85504646 85504721 -3999832 + AluJ/FLAM SINE Alu 2 76 -236 641 218 56 0 chr17 85505346 85505488 -3999065 + MER5A DNA MER1_type 33 182 -7 2389 93 10 0 chr17 85505546 85505848 -3998705 - AluSx SINE Alu -7 305 1 238 293 198 0 chr17 85505859 85505975 -3998578 - MER5B DNA MER1_type -35 143 5 569 121 0 0 chr17 85507475 85507558 -3996995 + AluSc SINE Alu 2 84 -225 2341 93 3 6 chr17 85507558 85507869 -3996684 + AluSg SINE Alu 1 310 0 279 176 22 33 chr17 85510955 85511046 -3993507 + (CA)n Simple_repeat Simple_repeat 2 91 0 363 184 59 20 chr17 85511065 85511217 -3993336 + (CA)n Simple_repeat Simple_repeat 2 159 0 680 124 99 0 chr17 85512722 85512843 -3991710 - FLAM_C SINE Alu 0 133 1 2707 49 0 0 chr17 85513801 85514107 -3990446 - AluY SINE Alu -5 306 1 2024 147 13 0 chr17 85515768 85516068 -3988485 - AluJb SINE Alu -8 304 1 183 80 0 0 chr17 85516476 85516501 -3988052 + (TTC)n Simple_repeat Simple_repeat 1 25 0 2441 94 7 0 chr17 85517011 85517320 -3987233 + AluSx SINE Alu 1 311 -1 694 53 84 0 chr17 85517346 85517441 -3987112 + L1PA10 LINE L1 6053 6155 -13 243 0 0 0 chr17 85517457 85517484 -3987069 + (A)n Simple_repeat Simple_repeat 1 27 0 32 26 0 0 chr17 85517500 85517539 -3987014 + AT_rich Low_complexity Low_complexity 1 39 0 1231 211 10 24 chr17 85518012 85518310 -3986243 + AluSx SINE Alu 19 312 0 577 97 86 0 chr17 85518334 85518427 -3986126 + L1PA10 LINE L1 6055 6155 -13 243 0 0 0 chr17 85518444 85518471 -3986082 + (A)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr17 85518498 85518525 -3986028 + AT_rich Low_complexity Low_complexity 1 27 0 1085 197 6 0 chr17 85521643 85521821 -3982732 - AluSx SINE Alu -133 179 1 1667 178 3 31 chr17 85522075 85522368 -3982185 - AluJo SINE Alu -27 285 1 271 265 83 77 chr17 85522511 85522692 -3981861 + L2 LINE L2 3122 3303 -10 1138 143 40 85 chr17 85523446 85523670 -3980883 - AluJo SINE Alu -13 299 86 2042 102 4 0 chr17 85523675 85523930 -3980623 - AluSx SINE Alu -23 289 34 573 200 0 39 chr17 85523940 85524070 -3980483 - AluJb SINE Alu -17 295 171 1750 169 28 10 chr17 85524107 85524397 -3980156 - AluJb SINE Alu -17 295 1 2201 98 3 52 chr17 85524650 85524977 -3979576 + AluSx SINE Alu 1 311 -1 206 75 50 50 chr17 85525167 85525207 -3979346 + (TATG)n Simple_repeat Simple_repeat 3 42 0 910 142 18 12 chr17 85525208 85525377 -3979176 - L1MC4 LINE L1 -125 7917 7748 2266 98 0 7 chr17 85525405 85525702 -3978851 + AluSc SINE Alu 1 295 -14 1609 188 11 4 chr17 85525745 85526016 -3978537 + AluJo SINE Alu 21 293 -19 2445 66 3 28 chr17 85526226 85526545 -3978008 + AluY SINE Alu 1 311 0 2000 100 25 7 chr17 85528489 85528770 -3975783 + AluSx SINE Alu 1 286 -26 2388 100 0 6 chr17 85528870 85529181 -3975372 + AluSc SINE Alu 1 309 0 391 151 0 23 chr17 85529542 85529628 -3974925 + (CATA)n Simple_repeat Simple_repeat 4 87 0 251 196 0 0 chr17 85529631 85529682 -3974871 - MER4-int LTR ERV1 -5436 1162 1112 491 193 14 28 chr17 85529693 85529838 -3974715 + (CATA)n Simple_repeat Simple_repeat 2 144 0 1883 160 0 35 chr17 85529977 85530162 -3974391 - AluJo SINE Alu -11 301 130 1291 336 3 73 chr17 85530162 85530492 -3974061 + AluSx SINE Alu 1 307 -5 1883 160 0 35 chr17 85530492 85530618 -3973935 - AluJo SINE Alu -182 130 1 286 217 88 22 chr17 85530625 85530750 -3973803 - L1ME2 LINE L1 0 6164 6028 * 330 192 135 10 chr17 85530722 85530826 -3973727 - L1ME3 LINE L1 -124 6038 5922 1769 174 75 0 chr17 85530830 85531151 -3973402 + MER7A DNA MER2_type 1 343 -3 2072 109 58 0 chr17 85531316 85531609 -3972944 + AluSx SINE Alu 3 312 0 1820 178 3 25 chr17 85531640 85531954 -3972599 + AluJb SINE Alu 1 307 -5 414 329 20 13 chr17 85532158 85532307 -3972246 - MER5A DNA MER1_type 0 189 40 729 90 9 9 chr17 85533155 85533266 -3971287 + AluSq/x SINE Alu 24 134 -179 290 276 19 19 chr17 85533433 85533538 -3971015 + MIR SINE MIR 64 168 -94 1621 141 52 39 chr17 85534034 85534339 -3970214 + AluJo SINE Alu 1 309 -3 306 0 0 0 chr17 85535229 85535263 -3969290 + (TA)n Simple_repeat Simple_repeat 2 35 0 2401 89 0 32 chr17 85535263 85535579 -3968974 - AluSx SINE Alu -6 306 1 727 158 75 0 chr17 85538260 85538393 -3966160 + AluJb SINE Alu 148 290 -22 332 285 55 77 chr17 85538417 85538652 -3965901 + L1MEc LINE L1 2119 2348 -4048 307 108 59 8 chr17 85540089 85540293 -3964260 + AluSx SINE Alu 1 285 -16 1926 158 0 26 chr17 85541463 85541774 -3962779 + AluJo SINE Alu 1 303 -9 1687 183 35 0 chr17 85541784 85542068 -3962485 + AluJo SINE Alu 1 294 -18 837 161 0 8 chr17 85542570 85542700 -3961853 + AluJo SINE Alu 6 134 -178 617 264 44 0 chr17 85543350 85543532 -3961021 - MER58A DNA MER1_type -2 222 33 2241 91 11 3 chr17 85543594 85543881 -3960672 - AluSg SINE Alu -21 289 1 434 351 34 8 chr17 85544156 85544418 -3960135 - L1ME3 LINE L1 -318 5852 5584 2436 97 0 3 chr17 85544787 85545097 -3959456 + AluSg SINE Alu 1 309 -1 1782 134 22 7 chr17 85545183 85545458 -3959095 + AluSq SINE Alu 11 289 -24 1670 172 23 23 chr17 85545503 85545805 -3958748 + AluJo SINE Alu 1 302 -10 773 293 106 13 chr17 85546323 85546709 -3957844 + Charlie7 DNA MER1_type 223 644 -1968 1219 109 6 6 chr17 85546710 85546875 -3957678 + AluSx SINE Alu 2 166 -146 292 229 95 0 chr17 85546978 85547083 -3957470 - L1M4 LINE L1 -2621 3525 3411 331 165 0 114 chr17 85547110 85547141 -3957412 - AluJo SINE Alu -147 155 122 1925 115 63 14 chr17 85547141 85547427 -3957126 - AluSx SINE Alu -12 300 1 331 165 0 114 chr17 85547427 85547474 -3957079 - AluJo SINE Alu -180 122 86 858 228 0 6 chr17 85547520 85547687 -3956866 + AluJo SINE Alu 125 290 -22 198 71 0 0 chr17 85547689 85547717 -3956836 + (TA)n Simple_repeat Simple_repeat 2 29 0 336 119 0 0 chr17 85549487 85549546 -3955007 + (CA)n Simple_repeat Simple_repeat 2 60 0 1404 160 61 29 chr17 85549595 85549908 -3954645 + MER33 DNA MER1_type 1 323 -1 189 365 95 8 chr17 85550062 85550188 -3954365 + MIR SINE MIR 21 157 -105 965 164 6 0 chr17 85550638 85550809 -3953744 + FAM SINE Alu 1 172 -3 2101 87 35 7 chr17 85550811 85551100 -3953453 + AluSg1 SINE Alu 12 308 -1 21 36 0 0 chr17 85553022 85553050 -3951503 + GC_rich Low_complexity Low_complexity 1 28 0 2272 75 7 0 chr17 85554708 85554988 -3949565 + AluSx SINE Alu 1 309 0 223 37 0 0 chr17 85554988 85555015 -3949538 + (GAAAA)n Simple_repeat Simple_repeat 2 160 0 2254 114 0 10 chr17 85555015 85555321 -3949232 + AluSx SINE Alu 1 303 -9 2109 119 27 0 chr17 85556468 85556762 -3947791 - AluSx SINE Alu -6 306 5 272 194 28 0 chr17 85557125 85557197 -3947356 + (CA)n Simple_repeat Simple_repeat 2 75 0 310 335 64 32 chr17 85557654 85557872 -3946681 - L2 LINE L2 -151 3121 2897 845 99 8 0 chr17 85557878 85557999 -3946554 + AluSg/x SINE Alu 187 308 -2 2347 99 3 3 chr17 85558190 85558493 -3946060 + AluSx SINE Alu 1 303 -9 2279 104 0 0 chr17 85559135 85559457 -3945096 + AluSx SINE Alu 1 322 0 507 198 0 0 chr17 85559758 85559854 -3944699 + L1MB4 LINE L1 5523 5618 -556 492 135 0 65 chr17 85559931 85560116 -3944437 + (TA)n Simple_repeat Simple_repeat 1 173 0 2185 100 10 7 chr17 85560182 85560482 -3944071 - AluSx SINE Alu -9 303 3 264 141 28 14 chr17 85560510 85560581 -3943972 + (TA)n Simple_repeat Simple_repeat 1 72 0 229 173 0 25 chr17 85560685 85560766 -3943787 + (TA)n Simple_repeat Simple_repeat 1 79 0 1882 183 94 11 chr17 85560781 85561240 -3943313 + L1MB4 LINE L1 5643 6139 -41 1628 83 5 0 chr17 85561243 85561447 -3943106 + AluSc SINE Alu 1 205 -104 1950 131 10 36 chr17 85561772 85562078 -3942475 + AluSx SINE Alu 1 298 -14 2143 106 0 4 chr17 85563596 85563871 -3940682 + AluSx SINE Alu 1 274 -38 546 281 71 19 chr17 85564048 85564258 -3940295 - L3 LINE CR1 -103 1474 1254 305 219 55 0 chr17 85564300 85564373 -3940180 - MIR SINE MIR -105 157 81 287 320 103 25 chr17 85565127 85565330 -3939223 - L3 LINE CR1 -664 913 695 2303 105 3 0 chr17 85565444 85565739 -3938814 - AluSx SINE Alu -16 296 1 242 372 8 0 chr17 85566474 85566603 -3937950 - MER5A DNA MER1_type -59 130 1 315 236 14 0 chr17 85566840 85566912 -3937641 + MER5A DNA MER1_type 3 75 -114 227 163 0 20 chr17 85566914 85566963 -3937590 + Alu SINE Alu 4 51 -250 2400 104 0 0 chr17 85566968 85567275 -3937278 + AluSx SINE Alu 4 310 -2 242 79 53 0 chr17 85567275 85567313 -3937240 + MER5A DNA MER1_type 66 105 -84 585 239 32 19 chr17 85567637 85567792 -3936761 + MIR SINE MIR 16 172 -90 240 233 186 11 chr17 85567873 85567962 -3936591 + MIR SINE MIR 45 149 -59 21 0 0 0 chr17 85568886 85568907 -3935646 + GC_rich Low_complexity Low_complexity 1 21 0 2233 195 20 60 chr17 85570329 85570571 -3933982 - L1M4 LINE L1 -620 5558 5308 2265 134 0 0 chr17 85570571 85570878 -3933675 - AluSx SINE Alu -5 307 1 2233 195 20 60 chr17 85570878 85571365 -3933188 - L1M4 LINE L1 -870 5308 4855 563 309 12 6 chr17 85571593 85571758 -3932795 + MIR SINE MIR 60 225 -37 249 219 0 0 chr17 85572223 85572296 -3932257 + (CA)n Simple_repeat Simple_repeat 1 73 0 282 304 0 0 chr17 85572312 85572576 -3931977 + (CA)n Simple_repeat Simple_repeat 1 264 0 381 279 0 0 chr17 85572622 85572801 -3931752 + (CA)n Simple_repeat Simple_repeat 2 180 0 878 254 5 5 chr17 85573015 85573232 -3931321 - MER20 DNA MER1_type -2 217 1 2338 99 3 13 chr17 85575389 85575691 -3928862 + AluSx SINE Alu 1 299 -13 189 0 0 0 chr17 85575760 85575781 -3928772 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 414 127 0 0 chr17 85575781 85575836 -3928717 - AluS SINE Alu -32 279 225 289 51 0 0 chr17 85575946 85575985 -3928568 + AluSc SINE Alu 176 214 -85 378 136 61 0 chr17 85576024 85576090 -3928463 + Tigger5 DNA MER2_type 2254 2323 0 366 272 88 41 chr17 85576300 85576311 -3928242 + L1MC4 LINE L1 6636 6645 -1397 1200 111 0 0 chr17 85576311 85576491 -3928062 + (TA)n Simple_repeat Simple_repeat 1 180 0 366 272 88 41 chr17 85576491 85576626 -3927927 + L1MC4 LINE L1 6645 6789 -1253 207 289 0 0 chr17 85576914 85576966 -3927587 + (CATA)n Simple_repeat Simple_repeat 2 53 0 933 193 0 0 chr17 85577787 85577937 -3926616 - FRAM SINE Alu -15 161 12 462 253 47 26 chr17 85577941 85578131 -3926422 - LTR40c LTR ERVL -55 410 217 2365 87 3 31 chr17 85578160 85578482 -3926071 - AluSp SINE Alu 0 313 1 688 278 57 22 chr17 85578663 85578960 -3925593 - L1ME LINE L1 -325 5796 5486 1931 98 78 34 chr17 85578960 85579255 -3925298 - AluSx SINE Alu -4 308 1 688 278 57 22 chr17 85579255 85579274 -3925279 - L1ME LINE L1 -635 5486 5469 325 274 145 17 chr17 85579413 85579530 -3925023 - L2 LINE L2 0 3313 3182 1706 94 0 5 chr17 85579660 85579872 -3924681 + AluY SINE Alu 3 213 -98 323 43 0 0 chr17 85579872 85579919 -3924634 + AluY SINE Alu 254 300 0 752 161 0 0 chr17 85580067 85580179 -3924374 - FRAM SINE Alu -19 157 46 1173 174 22 186 chr17 85580463 85580529 -3924024 - L1ME2 LINE L1 -2 6162 6087 2211 127 0 0 chr17 85580529 85580849 -3923704 + AluSx SINE Alu 1 320 0 1173 174 22 186 chr17 85580849 85580955 -3923598 - L1ME2 LINE L1 -77 6087 5965 1348 164 160 0 chr17 85580955 85581237 -3923316 - AluJo SINE Alu 0 321 1 1173 174 22 186 chr17 85581237 85581472 -3923081 - L1ME2 LINE L1 -199 5965 5895 1674 89 166 8 chr17 85581472 85581731 -3922822 + AluSg SINE Alu 1 300 0 1173 174 22 186 chr17 85581731 85581968 -3922585 - L1ME2 LINE L1 -269 5895 5621 26 30 0 0 chr17 85581990 85582023 -3922530 + AT_rich Low_complexity Low_complexity 1 33 0 1943 174 0 13 chr17 85582257 85582567 -3921986 + AluJb SINE Alu 1 306 -6 306 0 0 0 chr17 85583371 85583405 -3921148 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 627 144 135 0 chr17 85583407 85583511 -3921042 - AluJb SINE Alu -193 119 2 867 136 0 84 chr17 85583572 85583727 -3920826 - FLAM_C SINE Alu -1 142 1 2151 128 7 0 chr17 85584176 85584465 -3920088 + AluSg SINE Alu 1 291 -19 1134 76 0 14 chr17 85584869 85585013 -3919540 + AluSq/x SINE Alu 1 142 -170 619 118 0 0 chr17 85585014 85585107 -3919446 + AluS SINE Alu 220 312 0 484 357 54 49 chr17 85585139 85585169 -3919384 + L2 LINE L2 2215 2243 -1071 2901 204 18 55 chr17 85585169 85585626 -3918927 - MER82 DNA MER2_type 0 653 181 1589 179 35 17 chr17 85585626 85585916 -3918637 + AluJb SINE Alu 1 295 -17 2901 204 18 55 chr17 85585916 85586083 -3918470 - MER82 DNA MER2_type -472 181 53 2139 92 24 7 chr17 85586083 85586377 -3918176 - AluSg SINE Alu -10 300 2 2901 204 18 55 chr17 85586377 85586428 -3918125 - MER82 DNA MER2_type -600 53 2 484 357 54 49 chr17 85586428 85586845 -3917708 + L2 LINE L2 2243 2664 -650 991 170 11 28 chr17 85587240 85587422 -3917131 - AluJo/FRAM SINE Alu 0 312 134 1904 120 0 25 chr17 85587422 85587697 -3916856 - AluSx SINE Alu -14 298 31 637 138 0 0 chr17 85587697 85587784 -3916769 - AluJ/FLAM SINE Alu -224 88 2 701 45 0 0 chr17 85588884 85588972 -3915581 - MER51B LTR ERV1 -78 299 212 1250 261 96 5 chr17 85589037 85589455 -3915098 + L1ME1 LINE L1 5672 6127 -39 267 31 0 0 chr17 85589727 85589759 -3914794 + (T)n Simple_repeat Simple_repeat 1 32 0 245 271 41 82 chr17 85589773 85589895 -3914658 + L2 LINE L2 3138 3254 -18 1758 195 0 7 chr17 85589942 85590245 -3914308 - AluJo SINE Alu -11 301 1 289 294 81 44 chr17 85590632 85590792 -3913761 + L2 LINE L2 3019 3184 -129 2366 101 0 0 chr17 85590996 85591293 -3913260 - AluSc SINE Alu -12 297 1 471 333 109 44 chr17 85592517 85593157 -3911396 + HAL1 LINE L1 215 896 -1611 305 204 159 53 chr17 85593160 85593273 -3911280 + HAL1 LINE L1 919 1043 -1464 1112 180 18 14 chr17 85593274 85593491 -3911062 - MER46A DNA MER2_type -2 234 17 277 203 0 16 chr17 85593647 85593711 -3910842 - L1ME4a LINE L1 -95 6026 5964 2187 102 0 7 chr17 85594016 85594334 -3910219 - AluSx SINE Alu 0 316 1 1739 192 11 0 chr17 85594336 85594623 -3909930 - AluJb SINE Alu -21 291 2 349 271 85 47 chr17 85594649 85594885 -3909668 + L1ME LINE L1 5547 5791 -330 * 438 231 23 15 chr17 85594874 85595004 -3909549 - L1MC4a LINE L1 -1202 6606 6476 271 228 353 11 chr17 85595028 85595212 -3909341 + LTR33 LTR ERVL 8 254 -267 271 314 20 0 chr17 85595278 85595380 -3909173 + LTR33 LTR ERVL 348 451 -70 848 168 0 0 chr17 85595528 85595653 -3908900 - FLAM_C SINE Alu -18 125 1 24 0 0 0 chr17 85595742 85595766 -3908787 + AT_rich Low_complexity Low_complexity 1 24 0 572 260 8 0 chr17 85596082 85596209 -3908344 - MER94 DNA DNA -2 132 5 2376 100 0 0 chr17 85596670 85596969 -3907584 + AluSx SINE Alu 1 299 -13 1335 281 78 22 chr17 85596970 85597433 -3907120 + L2 LINE L2 2413 2901 -413 471 268 125 12 chr17 85597473 85597641 -3906912 + L2 LINE L2 3122 3308 -5 382 247 85 26 chr17 85597726 85597933 -3906620 + L1ME4a LINE L1 5268 5482 -2326 500 289 96 0 chr17 85598574 85598730 -3905823 + MIR SINE MIR 90 260 -2 382 253 210 20 chr17 85598757 85599005 -3905548 + L1ME4a LINE L1 5620 5819 -302 234 0 0 0 chr17 85599005 85599031 -3905522 + (TG)n Simple_repeat Simple_repeat 2 27 0 382 253 210 20 chr17 85599031 85599186 -3905367 + L1ME4a LINE L1 5819 6100 -21 1691 184 72 0 chr17 85599450 85599770 -3904783 - MER2 DNA MER2_type -1 343 1 231 36 0 0 chr17 85600438 85600466 -3904087 + (TG)n Simple_repeat Simple_repeat 2 29 0 274 61 41 0 chr17 85600467 85600516 -3904037 + (GA)n Simple_repeat Simple_repeat 2 52 0 270 256 51 0 chr17 85601477 85601555 -3902998 + MER94 DNA DNA 24 105 -29 2353 104 3 0 chr17 85602166 85602473 -3902080 + AluSx SINE Alu 1 308 -4 2230 91 28 0 chr17 85602653 85602938 -3901615 - AluSx SINE Alu -19 293 1 316 300 136 47 chr17 85603104 85603421 -3901132 + L2 LINE L2 2924 3268 -4 2383 77 30 0 chr17 85603799 85604097 -3900456 - AluSc SINE Alu 0 309 3 380 77 0 0 chr17 85604797 85604849 -3899704 + AluY SINE Alu 157 208 -93 1033 264 18 0 chr17 85605176 85605396 -3899157 - MER58A DNA MER1_type 0 224 1 1604 160 21 7 chr17 85605651 85605932 -3898621 + AluJb SINE Alu 11 295 -17 2245 100 3 3 chr17 85605934 85606244 -3898309 + AluSx SINE Alu 3 312 0 186 103 0 0 chr17 85606626 85606655 -3897898 + (T)n Simple_repeat Simple_repeat 1 29 0 205 319 118 59 chr17 85606688 85606707 -3897846 - L2 LINE L2 -4 3309 3293 2167 98 3 0 chr17 85606707 85607004 -3897549 + AluSx SINE Alu 1 298 -14 205 319 118 59 chr17 85607004 85607119 -3897434 - L2 LINE L2 -20 3293 3167 1741 176 23 0 chr17 85607370 85607671 -3896882 + AluJb SINE Alu 1 308 -4 265 253 23 35 chr17 85608578 85608665 -3895888 + MIR SINE MIR 36 121 -141 2165 89 0 23 chr17 85612120 85612422 -3892131 + AluSq SINE Alu 1 295 -18 1281 168 48 87 chr17 85613676 85613986 -3890567 - AluJo SINE Alu -14 298 1 243 232 0 36 chr17 85614881 85614937 -3889616 + L2 LINE L2 3206 3259 -13 184 286 0 18 chr17 85616078 85616134 -3888419 - MIR SINE MIR -73 135 81 2351 80 0 13 chr17 85616386 85616700 -3887853 + AluSg SINE Alu 1 310 0 1829 102 106 14 chr17 85616811 85617095 -3887458 - AluSg SINE Alu 0 310 1 2084 103 0 33 chr17 85617565 85617865 -3886688 + AluSq SINE Alu 1 290 -23 857 147 77 65 chr17 85617875 85618045 -3886508 + AluSg/x SINE Alu 132 303 -9 182 37 37 0 chr17 85618653 85618680 -3885873 + (CTGGGG)n Simple_repeat Simple_repeat 2 29 0 2083 121 0 16 chr17 85619214 85619351 -3885202 + AluSx SINE Alu 1 139 -173 2043 135 0 0 chr17 85619351 85619647 -3884906 + AluSx SINE Alu 1 296 -16 2083 121 0 16 chr17 85619647 85619816 -3884737 + AluSx SINE Alu 139 302 -10 1807 143 38 0 chr17 85620801 85621088 -3883465 + AluJb SINE Alu 3 300 -12 1830 103 4 8 chr17 85621304 85621565 -3882988 + AluSq SINE Alu 44 303 -10 184 406 0 38 chr17 85621619 85621725 -3882828 + MIR SINE MIR 82 183 -79 1507 159 83 11 chr17 85622101 85622377 -3882176 + AluJo SINE Alu 1 296 -16 2265 75 7 0 chr17 85622532 85622827 -3881726 - AluY SINE Alu -13 298 2 2035 142 3 0 chr17 85622911 85623222 -3881331 - AluSx SINE Alu 0 312 1 2166 145 38 48 chr17 85623884 85623940 -3880613 - L1MB3 LINE L1 -1 6182 6127 294 29 0 0 chr17 85623940 85623975 -3880578 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2258 78 0 0 chr17 85623975 85624259 -3880294 - AluSx SINE Alu -28 284 1 2166 145 38 48 chr17 85624259 85624554 -3879999 - L1MB3 LINE L1 -55 6128 5832 2192 109 0 13 chr17 85624554 85624865 -3879688 - AluSx SINE Alu -5 307 1 2166 145 38 48 chr17 85624865 85624931 -3879622 - L1MB3 LINE L1 -351 5832 5767 1765 139 36 20 chr17 85624953 85625256 -3879297 - AluJo SINE Alu -4 308 1 938 194 73 24 chr17 85625351 85625557 -3878996 - MER20 DNA MER1_type -3 216 1 781 238 31 31 chr17 85625564 85625757 -3878796 + MER3 DNA MER1_type 15 207 -2 2042 151 0 0 chr17 85625844 85626156 -3878397 + AluSx SINE Alu 1 312 0 2429 62 0 13 chr17 85626496 85626803 -3877750 + AluY SINE Alu 1 303 -8 2005 122 20 0 chr17 85627122 85627416 -3877137 - AluSx SINE Alu -12 300 1 2264 198 82 36 chr17 85627416 85627968 -3876585 - L1MB8 LINE L1 -60 6118 5542 1172 119 0 0 chr17 85628584 85628752 -3875801 - AluSg/x SINE Alu -11 301 134 2304 84 3 0 chr17 85628752 85629050 -3875503 - AluSp SINE Alu -12 301 3 1407 178 44 20 chr17 85629050 85629321 -3875232 - L1MB3 LINE L1 -71 6112 5832 2068 115 13 7 chr17 85629321 85629625 -3874928 - AluSx SINE Alu -6 306 1 1407 178 44 20 chr17 85629625 85629646 -3874907 - L1MB3 LINE L1 -351 5832 5813 777 197 0 0 chr17 85629853 85629975 -3874578 + AluJo SINE Alu 2 123 -189 678 168 19 6 chr17 85629976 85630137 -3874416 + GA-rich Low_complexity Low_complexity 4 166 0 904 192 0 34 chr17 85630142 85630319 -3874234 + AluJo SINE Alu 129 299 -13 484 265 18 35 chr17 85630365 85630535 -3874018 + MIR SINE MIR 22 188 -74 3812 156 14 20 chr17 85630825 85630853 -3873700 + L1PA16 LINE L1 5462 5489 -677 2131 111 0 16 chr17 85630853 85631168 -3873385 + AluY SINE Alu 1 310 -1 3812 156 14 20 chr17 85631168 85631827 -3872726 + L1PA16 LINE L1 5489 6145 -21 1631 133 4 4 chr17 85632547 85632796 -3871757 + AluSx SINE Alu 56 304 -8 182 176 0 0 chr17 85632945 85632979 -3871574 - MIR SINE MIR -13 249 216 2267 103 0 0 chr17 85633339 85633641 -3870912 - AluSx SINE Alu -10 302 1 1243 111 0 6 chr17 85634188 85634368 -3870185 - AluSg/x SINE Alu 0 310 132 1869 161 0 16 chr17 85634368 85634685 -3869868 - AluSq SINE Alu -1 312 1 2247 96 3 10 chr17 85634703 85635017 -3869536 - AluSx SINE Alu 0 312 1 850 96 26 0 chr17 85635415 85635530 -3869023 + AluJb SINE Alu 1 118 -194 21 36 0 0 chr17 85635533 85635561 -3868992 + AT_rich Low_complexity Low_complexity 1 28 0 1733 167 7 14 chr17 85635570 85635858 -3868695 + AluJo SINE Alu 1 286 -26 2302 64 0 22 chr17 85635922 85636234 -3868319 - AluY SINE Alu -6 305 1 2176 99 3 10 chr17 85636293 85636607 -3867946 - AluSx SINE Alu 0 312 1 1851 150 3 3 chr17 85637107 85637401 -3867152 + AluSx SINE Alu 1 294 -18 1833 161 43 0 chr17 85641594 85641893 -3862660 + AluJo SINE Alu 1 312 0 353 308 24 35 chr17 85642045 85642214 -3862339 - L1MC5 LINE L1 -95 7866 7700 2138 92 0 36 chr17 85642215 85642519 -3862034 - AluSg SINE Alu -17 293 1 276 154 31 31 chr17 85642553 85642618 -3861935 + AluJ/FLAM SINE Alu 1 65 -237 2198 106 0 3 chr17 85642720 85643021 -3861532 + AluSx SINE Alu 3 302 -10 290 238 62 0 chr17 85643311 85643391 -3861162 + MIR SINE MIR 63 147 -115 2138 100 0 10 chr17 85643433 85643732 -3860821 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr17 85643742 85643763 -3860790 + AT_rich Low_complexity Low_complexity 1 21 0 282 263 12 12 chr17 85645858 85645938 -3858615 - MER5A DNA MER1_type -1 188 109 1072 180 13 53 chr17 85646093 85646321 -3858232 - MER20 DNA MER1_type 0 219 1 2331 66 7 3 chr17 85647711 85648012 -3856541 - AluY SINE Alu -9 302 1 2053 118 3 10 chr17 85649935 85650232 -3854321 + AluSq SINE Alu 2 296 -17 951 147 26 0 chr17 85650785 85650941 -3853612 - FRAM SINE Alu -18 158 1 556 282 128 17 chr17 85650975 85651273 -3853280 + L1ME LINE L1 5288 5571 -591 2230 59 7 46 chr17 85651914 85652220 -3852333 + AluY SINE Alu 1 294 -17 381 43 0 0 chr17 85703758 85703805 -3800748 + (CAT)n Simple_repeat Simple_repeat 2 48 0 33 0 0 0 chr17 85703856 85703889 -3800664 + AT_rich Low_complexity Low_complexity 1 33 0 2078 112 10 0 chr17 85704043 85704337 -3800216 - AluSq SINE Alu -16 297 1 261 0 0 0 chr17 85706768 85706797 -3797756 + (TG)n Simple_repeat Simple_repeat 1 29 0 273 314 14 0 chr17 85706931 85707001 -3797552 + L2 LINE L2 3202 3272 0 274 325 41 24 chr17 85707219 85707342 -3797211 + MIR3 SINE MIR 47 171 -37 280 358 123 15 chr17 85707651 85707855 -3796698 + L2 LINE L2 3045 3270 -2 393 102 0 0 chr17 85708204 85708263 -3796290 + (TG)n Simple_repeat Simple_repeat 2 60 0 2107 116 0 3 chr17 85708322 85708785 -3795768 - AluSx SINE Alu 0 462 1 2437 81 0 0 chr17 85708879 85709189 -3795364 - AluY SINE Alu -1 310 1 2173 104 14 0 chr17 85709331 85709628 -3794925 - AluSx SINE Alu -11 301 1 234 350 145 14 chr17 85709928 85710211 -3794342 - L2 LINE L2 -26 3246 2927 198 349 24 83 chr17 85710476 85710669 -3793884 - L2 LINE L2 -806 2508 2332 2261 105 0 3 chr17 85710669 85710973 -3793580 + AluSq SINE Alu 1 303 -10 198 349 24 83 chr17 85710973 85711031 -3793522 - L2 LINE L2 -982 2332 2272 476 250 163 6 chr17 85711032 85711204 -3793349 + MER3 DNA MER1_type 1 199 -10 1403 152 72 51 chr17 85711311 85711609 -3792944 + AluJo SINE Alu 1 304 0 2133 125 7 0 chr17 85713320 85713615 -3790938 - AluSx SINE Alu -15 297 1 292 326 136 17 chr17 85713887 85714123 -3790430 + MARNA DNA Mariner 163 426 -160 2052 109 25 0 chr17 85714239 85714523 -3790030 + AluSx SINE Alu 9 299 -13 496 297 11 22 chr17 85715581 85715763 -3788790 + (TG)n Simple_repeat Simple_repeat 1 180 0 261 231 16 39 chr17 85715780 85715962 -3788591 + (TG)n Simple_repeat Simple_repeat 1 178 0 347 263 29 14 chr17 85715984 85716335 -3788218 + (TG)n Simple_repeat Simple_repeat 1 356 0 298 247 23 6 chr17 85716352 85716526 -3788027 + (TG)n Simple_repeat Simple_repeat 1 177 0 262 308 103 40 chr17 85717671 85717973 -3786580 - L2 LINE L2 -20 3252 2932 407 321 88 38 chr17 85718179 85718599 -3785954 - L2 LINE L2 -661 2653 2213 243 88 0 0 chr17 85719959 85719993 -3784560 + (T)n Simple_repeat Simple_repeat 1 34 0 733 241 89 40 chr17 85722536 85722839 -3781714 + L1ME3 LINE L1 5842 6159 -3 2002 137 3 0 chr17 85722863 85723163 -3781390 + AluJo SINE Alu 1 301 -11 395 230 70 0 chr17 85723202 85723302 -3781251 + MLT1J LTR MaLR 229 335 -176 2044 127 0 10 chr17 85723911 85724219 -3780334 + AluSx SINE Alu 5 309 -3 336 321 91 30 chr17 85724263 85724428 -3780125 + HERVL LTR ERVL 1763 1937 -3827 186 189 0 0 chr17 85724633 85724670 -3779883 + (CA)n Simple_repeat Simple_repeat 1 37 0 271 277 45 9 chr17 85725883 85725995 -3778558 + HERVL LTR ERVL 4284 4399 -1255 332 292 46 55 chr17 85726418 85726464 -3778089 + HERVL LTR ERVL 4806 4851 -803 2055 122 16 0 chr17 85726464 85726767 -3777786 - AluSc SINE Alu -1 308 1 332 292 46 55 chr17 85726767 85726939 -3777614 + HERVL LTR ERVL 4851 5022 -632 1636 155 0 63 chr17 85727358 85727675 -3776878 + AluJb SINE Alu 1 297 -15 2053 129 3 0 chr17 85728553 85728848 -3775705 + AluSx SINE Alu 1 296 -16 273 313 82 30 chr17 85729025 85729159 -3775394 + L2 LINE L2 3173 3313 0 24 0 0 0 chr17 85730368 85730392 -3774161 + GC_rich Low_complexity Low_complexity 1 24 0 306 0 0 0 chr17 85730996 85731030 -3773523 + (TG)n Simple_repeat Simple_repeat 1 34 0 2035 141 0 3 chr17 85732455 85732754 -3771799 + AluJb SINE Alu 1 298 -14 270 312 73 0 chr17 85732945 85733054 -3771499 + MIR3 SINE MIR 51 167 -41 380 258 69 6 chr17 85733149 85733308 -3771245 - MER46C DNA MER2_type -169 169 1 214 227 0 0 chr17 85734862 85734906 -3769647 + MIR SINE MIR 96 139 -123 697 293 78 7 chr17 85735249 85735556 -3768997 + L1MC4a LINE L1 5552 5880 -1928 386 264 6 61 chr17 85735550 85735713 -3768840 + L1M4 LINE L1 4455 4608 -1538 * 292 336 0 0 chr17 85735889 85735993 -3768560 + G-rich Low_complexity Low_complexity 1 104 0 199 260 96 14 chr17 85736120 85736193 -3768360 - L2 LINE L2 -797 2517 2439 1121 154 23 77 chr17 85736246 85736331 -3768222 + MER3 DNA MER1_type 1 89 -120 1952 163 0 0 chr17 85736331 85736631 -3767922 - AluJo SINE Alu -12 300 1 1121 154 23 77 chr17 85736631 85736766 -3767787 + MER3 DNA MER1_type 89 209 0 318 336 36 29 chr17 85736818 85736958 -3767595 + L2 LINE L2 3112 3252 -20 191 250 50 33 chr17 85736985 85737045 -3767508 + L3 LINE CR1 1514 1574 -3 1071 106 0 13 chr17 85737263 85737278 -3767275 - AluSq/x SINE Alu -163 149 135 2330 88 0 3 chr17 85737278 85737585 -3766968 - AluSc SINE Alu -3 306 1 1071 106 0 13 chr17 85737585 85737720 -3766833 - AluSq/x SINE Alu -177 135 1 25 0 0 0 chr17 85737819 85737844 -3766709 + AT_rich Low_complexity Low_complexity 1 25 0 1846 146 0 11 chr17 85737846 85738120 -3766433 - AluJb SINE Alu -33 279 9 2481 75 0 0 chr17 85738139 85738445 -3766108 - AluSx SINE Alu -6 306 1 311 321 132 25 chr17 85738835 85739078 -3765475 - MARNA DNA Mariner -160 426 158 888 231 5 14 chr17 85739317 85739525 -3765028 + MER20 DNA MER1_type 4 209 -10 2177 96 0 10 chr17 85739528 85739830 -3764723 + AluSx SINE Alu 6 304 -8 331 350 49 53 chr17 85739869 85740206 -3764347 + L1MC4 LINE L1 2002 6982 -1340 1182 178 130 20 chr17 85740346 85740599 -3763954 + AluJb SINE Alu 13 293 -19 1569 146 30 37 chr17 85740768 85741063 -3763490 + AluJb SINE Alu 1 293 -19 1992 105 44 17 chr17 85741661 85741957 -3762596 + AluSx SINE Alu 9 312 0 2271 93 0 10 chr17 85742497 85742799 -3761754 + AluSp SINE Alu 1 299 -14 328 287 7 105 chr17 85743034 85743081 -3761472 - L1MC4a LINE L1 -1898 5910 5860 2102 116 6 10 chr17 85743081 85743392 -3761161 + AluSx SINE Alu 1 310 -2 328 287 7 105 chr17 85743392 85743487 -3761066 - L1MC4a LINE L1 -1948 5860 5782 255 268 28 0 chr17 85743796 85743867 -3760686 + MLT1H LTR MaLR 72 144 -405 1224 149 0 5 chr17 85743905 85744099 -3760454 + AluJo SINE Alu 1 193 -119 840 232 72 25 chr17 85747622 85747941 -3756612 + MLT1D LTR MaLR 1 334 -171 464 316 0 40 chr17 85748891 85749210 -3755343 + C-rich Low_complexity Low_complexity 1 306 0 220 268 24 24 chr17 85750203 85750285 -3754268 + G-rich Low_complexity Low_complexity 6 87 0 267 284 6 35 chr17 85750352 85750521 -3754032 + G-rich Low_complexity Low_complexity 5 168 0 235 120 20 20 chr17 85750522 85750572 -3753981 + GA-rich Low_complexity Low_complexity 3 52 0 720 220 36 107 chr17 85751224 85751568 -3752985 - MLT1C LTR MaLR -155 350 1 295 337 41 0 chr17 85752176 85752274 -3752279 - L2 LINE L2 -3 3269 3168 2252 197 54 55 chr17 85752757 85753683 -3750870 + L1MB4 LINE L1 4906 5822 -358 1850 96 0 30 chr17 85753683 85753953 -3750600 + AluSg SINE Alu 48 309 -1 2252 197 54 55 chr17 85753953 85754079 -3750474 + L1MB4 LINE L1 5822 5947 -233 399 123 12 25 chr17 85754080 85754161 -3750392 + L1MB7 LINE L1 6097 6176 -8 900 248 46 19 chr17 85759315 85759577 -3744976 + L1MB2 LINE L1 5902 6170 -1 360 0 0 0 chr17 85761960 85762000 -3742553 + (CACCC)n Simple_repeat Simple_repeat 4 43 0 2264 80 0 0 chr17 85762243 85762529 -3742024 - AluY SINE Alu -25 286 1 463 275 88 12 chr17 85763601 85763772 -3740781 + MER5A DNA MER1_type 6 189 0 385 279 28 7 chr17 85763780 85763972 -3740581 + MER58A DNA MER1_type 1 224 0 1846 160 0 13 chr17 85764282 85764588 -3739965 + AluJb SINE Alu 1 302 -10 333 247 169 45 chr17 85765326 85765384 -3739169 - MIR3 SINE MIR -3 205 156 2079 140 0 0 chr17 85765384 85765691 -3738862 - AluSx SINE Alu -5 307 1 333 247 169 45 chr17 85765691 85765810 -3738743 - MIR3 SINE MIR -52 156 6 1890 132 16 7 chr17 85766578 85766881 -3737672 + AluSx SINE Alu 1 306 -6 1266 70 87 0 chr17 85767285 85767457 -3737096 - THE1B LTR MaLR -177 187 1 328 225 14 0 chr17 85767457 85767528 -3737025 + Tigger1 DNA MER2_type 2347 2418 0 * 443 282 153 61 chr17 85767526 85767990 -3736563 - MLT1H LTR MaLR 0 549 7 2017 130 14 0 chr17 85768030 85768322 -3736231 - AluSx SINE Alu -16 296 1 652 249 88 20 chr17 85768407 85768802 -3735751 - LTR16B LTR ERVL -3 461 4 449 370 92 52 chr17 85768803 85768922 -3735631 + L1 LINE L1 4504 4617 -1529 2036 130 0 0 chr17 85768922 85769221 -3735332 + AluSx SINE Alu 1 299 -13 449 370 92 52 chr17 85769221 85769250 -3735303 + L1 LINE L1 4617 4643 -1503 2113 89 7 0 chr17 85769250 85769562 -3734991 + AluSx SINE Alu 1 314 0 449 370 92 52 chr17 85769562 85770049 -3734504 + L1 LINE L1 4643 5167 -979 275 353 0 12 chr17 85770053 85770220 -3734333 + L1M4 LINE L1 2889 3053 -3093 499 70 0 0 chr17 85770228 85770299 -3734254 + L1PB1 LINE L1 5710 5780 -371 192 49 0 98 chr17 85770317 85770378 -3734175 + (TA)n Simple_repeat Simple_repeat 2 56 0 219 136 0 82 chr17 85770431 85770578 -3733975 + (TA)n Simple_repeat Simple_repeat 2 136 0 268 204 46 37 chr17 85770606 85770714 -3733839 + (CATATA)n Simple_repeat Simple_repeat 2 110 0 2535 117 3 5 chr17 85770715 85771084 -3733469 + L1PB1 LINE L1 5783 6150 -1 1745 92 4 0 chr17 85771159 85771386 -3733167 + AluSx SINE Alu 1 228 -84 368 271 0 0 chr17 85771606 85771728 -3732825 + G-rich Low_complexity Low_complexity 1 122 0 337 299 0 0 chr17 85772229 85772326 -3732227 + (TG)n Simple_repeat Simple_repeat 1 97 0 201 184 41 0 chr17 85772698 85772747 -3731806 + MIR SINE MIR 102 152 -56 2093 100 0 7 chr17 85774963 85775253 -3729300 + AluSx SINE Alu 25 312 0 206 343 0 0 chr17 85775789 85775859 -3728694 + C-rich Low_complexity Low_complexity 1 70 0 287 167 30 0 chr17 85775984 85776050 -3728503 - L1M4 LINE L1 -2203 3943 3876 1856 142 0 41 chr17 85776054 85776230 -3728323 - AluSx SINE Alu -3 309 150 1998 160 7 3 chr17 85776230 85776536 -3728017 - AluSp SINE Alu -4 309 3 1856 142 0 41 chr17 85776536 85776677 -3727876 - AluSx SINE Alu -162 150 5 983 53 158 0 chr17 85778689 85778841 -3725712 - MER30 DNA MER1_type -54 176 1 214 346 0 0 chr17 85779895 85779973 -3724580 + G-rich Low_complexity Low_complexity 1 78 0 970 174 0 10 chr17 85780050 85780245 -3724308 + AluJb SINE Alu 120 312 0 1019 287 82 18 chr17 85780249 85780698 -3723855 + L1MEc LINE L1 1057 1557 -4839 2206 129 135 5 chr17 85780698 85781077 -3723476 + MSTA LTR MaLR 1 428 0 1019 287 82 18 chr17 85781077 85781240 -3723313 + L1MEc LINE L1 1557 1708 -4688 2343 186 30 32 chr17 85781347 85781823 -3722730 + L1MB7 LINE L1 5568 6044 -140 2171 103 0 7 chr17 85781823 85782124 -3722429 - AluSg SINE Alu -11 299 1 2343 186 30 32 chr17 85782124 85782178 -3722375 + L1MB7 LINE L1 6044 6097 -87 2207 113 3 0 chr17 85782182 85782492 -3722061 - AluSx SINE Alu -1 311 1 1344 153 12 4 chr17 85782496 85782737 -3721816 - MER31A LTR ERV1 0 485 243 259 215 15 15 chr17 85782724 85782789 -3721764 + MER73 LTR ERVL 421 485 -159 * 671 97 0 9 chr17 85782793 85782907 -3721646 - Tigger1 DNA MER2_type -89 2329 2217 1751 145 28 3 chr17 85782909 85783191 -3721362 + AluJb SINE Alu 3 291 -21 277 337 0 21 chr17 85783215 85783310 -3721243 + AluJ/FLAM SINE Alu 1 93 -209 211 366 0 12 chr17 85783362 85783444 -3721109 + C-rich Low_complexity Low_complexity 2 82 0 211 188 14 14 chr17 85783466 85783535 -3721018 + C-rich Low_complexity Low_complexity 5 73 0 482 263 36 21 chr17 85783807 85784184 -3720369 - L1M4 LINE L1 -1353 4793 4265 37 0 0 0 chr17 85784186 85784223 -3720330 + AT_rich Low_complexity Low_complexity 1 37 0 1749 167 0 14 chr17 85784241 85784534 -3720019 - AluJo SINE Alu -23 289 1 357 261 137 7 chr17 85784537 85784690 -3719863 - L1M4 LINE L1 -1880 4266 4094 274 314 23 0 chr17 85784688 85784774 -3719779 + L1MD3 LINE L1 7839 7926 -69 * 888 172 45 0 chr17 85784785 85784942 -3719611 + Tigger7 DNA MER2_type 8 171 -2316 1223 123 123 12 chr17 85784946 85785186 -3719367 + Tigger7 DNA MER2_type 2309 2580 -7 2612 142 36 39 chr17 85785186 85785652 -3718901 - MER4C LTR ERV1 0 465 1 890 237 39 60 chr17 85785720 85785959 -3718594 - L1M4 LINE L1 -2037 4109 3877 2246 88 16 3 chr17 85785959 85786264 -3718289 - AluSx SINE Alu -3 309 1 890 237 39 60 chr17 85786264 85786357 -3718196 - L1M4 LINE L1 -2269 3877 3784 1045 110 43 0 chr17 85786360 85786524 -3718029 + MER41B LTR ERV1 1 171 -464 2139 122 0 10 chr17 85786524 85786835 -3717718 + AluSx SINE Alu 1 308 -4 434 223 40 84 chr17 85787202 85787404 -3717149 - LTR33 LTR ERVL 0 521 329 598 362 31 0 chr17 85787864 85788093 -3716460 - MIR SINE MIR -19 243 8 26 0 0 0 chr17 85789179 85789205 -3715348 + GC_rich Low_complexity Low_complexity 1 26 0 212 119 0 48 chr17 85789311 85789353 -3715200 + (CGGGG)n Simple_repeat Simple_repeat 5 44 0 256 315 16 52 chr17 85789458 85789601 -3714952 - MIR SINE MIR -36 172 34 2269 98 0 0 chr17 85789618 85789924 -3714629 + AluSx SINE Alu 1 306 -6 242 266 0 38 chr17 85789933 85790012 -3714541 - LTR37A LTR ERV1 -350 76 1 481 241 184 0 chr17 85790993 85791151 -3713402 - MER53 DNA DNA -2 187 1 748 297 77 50 chr17 85791534 85791938 -3712615 + MLT1J LTR MaLR 1 415 -96 1624 125 68 18 chr17 85791938 85792217 -3712336 - AluSg SINE Alu -17 293 1 509 176 231 0 chr17 85792219 85792327 -3712226 - FLAM_C SINE Alu -9 134 2 230 244 93 0 chr17 85792331 85792417 -3712136 + MLT1J LTR MaLR 410 503 -8 841 130 24 71 chr17 85792627 85792796 -3711757 + AluJb SINE Alu 2 162 -150 272 321 12 42 chr17 85792903 85793068 -3711485 + L1M4 LINE L1 4739 4898 -1248 711 142 8 0 chr17 85793235 85793355 -3711198 - MER41A LTR ERV1 0 554 434 808 142 24 0 chr17 85793355 85793482 -3711071 + AluSq/x SINE Alu 1 130 -182 399 123 15 0 chr17 85793505 85793570 -3710983 - MER41A LTR ERV1 -456 98 33 939 152 13 0 chr17 85793572 85793730 -3710823 + AluSg/x SINE Alu 150 309 -1 3105 142 6 17 chr17 85793730 85794252 -3710301 - MER41B LTR ERV1 -119 516 1 5076 150 16 21 chr17 85794252 85794587 -3709966 - MER41B-int LTR ERV1 0 5946 5611 2547 131 54 2 chr17 85794587 85794993 -3709560 + MSTA LTR MaLR 1 427 -1 5076 150 16 21 chr17 85794993 85795590 -3708963 - MER41B-int LTR ERV1 -335 5611 5019 6426 144 33 31 chr17 85795694 85796807 -3707746 - MER41B-int LTR ERV1 -4831 1115 1 4229 130 21 2 chr17 85796807 85797428 -3707125 - MER41B LTR ERV1 0 635 3 1148 222 68 79 chr17 85797726 85798181 -3706372 - LTR7 LTR ERV1 0 450 1 1819 124 15 4 chr17 85799441 85799708 -3704845 + AluSx SINE Alu 14 283 -29 255 79 0 0 chr17 85799708 85799746 -3704807 + (CTAAA)n Simple_repeat Simple_repeat 3 40 0 419 341 97 25 chr17 85799827 85800307 -3704246 - L1MC4a LINE L1 -1875 5933 5420 1439 184 10 47 chr17 85800316 85800448 -3704105 + AluJo SINE Alu 3 138 -174 2099 94 10 3 chr17 85800448 85800736 -3703817 + AluSg SINE Alu 1 290 -20 1439 184 10 47 chr17 85800736 85800902 -3703651 + AluJo SINE Alu 138 290 -22 2139 118 0 9 chr17 85800910 85801225 -3703328 + AluJb SINE Alu 1 312 0 261 278 117 33 chr17 85801665 85802030 -3702523 - L1MC4a LINE L1 -2632 3514 3118 1524 160 33 27 chr17 85802033 85802065 -3702488 - AluJb SINE Alu 0 312 282 297 0 0 0 chr17 85802065 85802098 -3702455 + (TG)n Simple_repeat Simple_repeat 2 34 0 1524 160 33 27 chr17 85802098 85802365 -3702188 - AluJb SINE Alu -30 282 11 1928 82 31 0 chr17 85802376 85802631 -3701922 - AluSx SINE Alu -14 298 36 1429 162 7 44 chr17 85802635 85802951 -3701602 - AluJo SINE Alu 0 327 22 1941 121 10 27 chr17 85803995 85804292 -3700261 + AluSx SINE Alu 1 292 -20 269 273 30 15 chr17 85804608 85804740 -3699813 + C-rich Low_complexity Low_complexity 4 137 0 300 255 220 50 chr17 85806320 85806520 -3698033 + L2 LINE L2 3019 3252 -20 611 190 91 0 chr17 85807749 85807870 -3696683 - AluJb SINE Alu -11 301 170 195 186 0 0 chr17 85808545 85808588 -3695965 + T-rich Low_complexity Low_complexity 1 43 0 6805 140 17 30 chr17 85810582 85810657 -3693896 - MER41-int LTR ERV1 -1217 4729 4655 2470 62 0 0 chr17 85810657 85810965 -3693588 + AluY SINE Alu 1 308 -3 6805 140 17 30 chr17 85810965 85812313 -3692240 - MER41-int LTR ERV1 -1291 4655 3325 388 227 23 8 chr17 85812340 85812468 -3692085 + C-rich Low_complexity Low_complexity 2 131 0 254 190 17 46 chr17 85812480 85812654 -3691899 + CT-rich Low_complexity Low_complexity 1 169 0 201 283 0 0 chr17 85812635 85812787 -3691766 + C-rich Low_complexity Low_complexity 1 152 0 * 213 141 31 31 chr17 85812788 85812852 -3691701 + CT-rich Low_complexity Low_complexity 2 65 0 297 250 0 11 chr17 85813307 85813395 -3691158 + MLT1C LTR MaLR 22 108 -359 996 118 0 0 chr17 85813403 85813538 -3691015 + AluSq/x SINE Alu 1 135 -177 2316 82 13 0 chr17 85813538 85813843 -3690710 + AluSp SINE Alu 1 309 -4 212 0 36 0 chr17 85813851 85813879 -3690674 + (TAAAAA)n Simple_repeat Simple_repeat 3 31 0 832 113 0 0 chr17 85813880 85813995 -3690558 + AluSq/x SINE Alu 1 115 -197 745 185 29 23 chr17 85814005 85814178 -3690375 + MLT1C LTR MaLR 293 466 -1 477 200 11 0 chr17 85814758 85814853 -3689700 - AluJo SINE Alu -9 303 208 541 212 23 23 chr17 85814863 85814995 -3689558 - AluJo SINE Alu -161 151 20 1306 121 104 39 chr17 85815309 85815430 -3689123 + MER54A LTR ERVL 1 113 -788 1945 137 3 3 chr17 85815430 85815722 -3688831 - AluSx SINE Alu -20 292 1 1306 121 104 39 chr17 85815722 85815880 -3688673 + MER54A LTR ERVL 113 298 -603 1526 207 29 44 chr17 85815888 85816299 -3688254 + MER73 LTR ERVL 164 568 -76 278 191 0 44 chr17 85816299 85816367 -3688186 + LTR49-int LTR ERV1 5575 5639 -692 2091 109 26 0 chr17 85816369 85816672 -3687881 - AluSx SINE Alu -1 311 1 1150 214 101 124 chr17 85816683 85817257 -3687296 - MER21B LTR ERV1 -291 572 12 1723 130 57 20 chr17 85817259 85817560 -3686993 + AluSq SINE Alu 2 313 0 23 68 0 0 chr17 85817571 85817615 -3686938 + AT_rich Low_complexity Low_complexity 1 44 0 29 47 0 0 chr17 85819540 85819583 -3684970 + GC_rich Low_complexity Low_complexity 1 43 0 254 333 39 0 chr17 85820511 85820589 -3683964 + L2 LINE L2 3232 3312 -1 21 36 0 0 chr17 85821782 85821810 -3682743 + AT_rich Low_complexity Low_complexity 1 28 0 324 0 0 0 chr17 85822035 85822071 -3682482 + (CA)n Simple_repeat Simple_repeat 1 36 0 412 391 88 28 chr17 85822782 85823288 -3681265 - L1M4 LINE L1 -1205 1302 834 183 129 0 0 chr17 85824737 85824768 -3679785 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 22 0 0 0 chr17 85826584 85826606 -3677947 + GC_rich Low_complexity Low_complexity 1 22 0 189 343 57 29 chr17 85830093 85830198 -3674355 - MIR3 SINE MIR -35 173 66 478 202 18 18 chr17 85830266 85830375 -3674178 - MER81 DNA DNA -4 110 2 1959 99 38 38 chr17 85830469 85830761 -3673792 + AluSx SINE Alu 1 292 -20 540 309 42 6 chr17 85830866 85831034 -3673519 - MER91A DNA MER1_type -22 174 1 2291 109 0 0 chr17 85831154 85831465 -3673088 + AluSx SINE Alu 1 311 -1 460 252 122 0 chr17 85832728 85832875 -3671678 + MER5B DNA MER1_type 1 165 -13 186 43 0 0 chr17 85833829 85833852 -3670701 + (GGATG)n Simple_repeat Simple_repeat 3 25 0 1753 167 155 18 chr17 85834632 85835070 -3669483 - LTR54B LTR ERV1 0 498 1 1183 124 11 6 chr17 85835353 85835531 -3669022 - AluJb SINE Alu 0 312 134 1868 116 3 63 chr17 85835531 85835850 -3668703 - AluSx SINE Alu -12 300 1 1909 128 11 0 chr17 85836036 85836317 -3668236 - AluSx SINE Alu -28 284 1 231 321 29 22 chr17 85836991 85837128 -3667425 + L2 LINE L2 2914 3051 -221 24 32 0 0 chr17 85837402 85837433 -3667120 + GC_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr17 85837690 85837718 -3666835 + GC_rich Low_complexity Low_complexity 1 28 0 966 171 15 14 chr17 85839687 85839909 -3664644 + MER41-int LTR ERV1 355 1453 -4493 3640 137 54 6 chr17 85839918 85840642 -3663911 + MER41-int LTR ERV1 2811 3569 -2377 352 288 173 7 chr17 85840787 85840926 -3663627 - L1M4 LINE L1 -790 5356 5195 2111 109 3 13 chr17 85840926 85841238 -3663315 - AluSx SINE Alu -3 309 1 2228 61 0 0 chr17 85841247 85841619 -3662934 - AluY SINE Alu 0 372 1 918 232 11 4 chr17 85841671 85841934 -3662619 + L1M4 LINE L1 3473 3737 -2409 970 85 39 0 chr17 85841934 85842063 -3662490 + AluSq/x SINE Alu 1 134 -179 788 95 17 0 chr17 85842227 85842343 -3662210 + AluY SINE Alu 182 299 -12 1398 128 0 104 chr17 85842343 85842592 -3661961 + MER4A LTR ERV1 399 615 -49 1840 129 14 7 chr17 85842592 85842895 -3661658 + AluSx SINE Alu 1 305 0 1398 128 0 104 chr17 85842895 85842941 -3661612 + MER4A LTR ERV1 615 664 0 243 325 70 22 chr17 85842943 85843171 -3661382 - L1M4 LINE L1 -1220 4926 4688 22 35 0 0 chr17 85844448 85844477 -3660076 + GC_rich Low_complexity Low_complexity 1 29 0 318 233 80 23 chr17 85845952 85846096 -3658457 - MIR SINE MIR -56 152 3 1727 146 4 11 chr17 85846636 85846917 -3657636 - AluJb SINE Alu -33 279 1 339 313 61 0 chr17 85848545 85848644 -3655909 - MIR SINE MIR -71 191 87 335 252 42 0 chr17 85850749 85850868 -3653685 + GA-rich Low_complexity Low_complexity 4 127 0 250 321 38 46 chr17 85855034 85855165 -3649388 + L2 LINE L2 3140 3269 -3 493 293 95 4 chr17 85855370 85855602 -3648951 + LTR16C LTR ERVL 215 467 -24 1993 123 17 0 chr17 85858932 85859224 -3645329 - AluSg SINE Alu -13 297 1 372 216 82 10 chr17 85861270 85861367 -3643186 + L2 LINE L2 3168 3271 -1 214 370 56 28 chr17 85861617 85861725 -3642828 - L3 LINE CR1 -1199 378 268 535 276 95 0 chr17 85863537 85863758 -3640795 - L1MD1 LINE L1 -1 6241 6000 1696 129 0 4 chr17 85863774 85864014 -3640539 + AluSx SINE Alu 51 289 -23 368 260 58 45 chr17 85864339 85864493 -3640060 + MER5A DNA MER1_type 1 156 -33 301 331 66 33 chr17 85865209 85865360 -3639193 - L2 LINE L2 -4 3268 3113 1839 157 10 10 chr17 85866182 85866494 -3638059 + AluJb SINE Alu 1 312 0 186 329 29 14 chr17 85866839 85866909 -3637644 - MIR3 SINE MIR -46 162 92 1559 112 4 4 chr17 85867803 85868035 -3636518 + L1MA2 LINE L1 6073 6304 0 276 373 63 0 chr17 85868138 85868264 -3636289 + L2 LINE L2 3180 3313 0 228 371 34 11 chr17 85868313 85868402 -3636151 - MIR SINE MIR -45 217 127 181 260 229 42 chr17 85868554 85868650 -3635903 - MIR SINE MIR -71 191 78 659 218 20 55 chr17 85868751 85868953 -3635600 - MER63A DNA MER1_type -15 195 1 254 303 83 36 chr17 85869483 85869820 -3634733 + LTR33 LTR ERVL 161 513 -8 182 338 0 29 chr17 85869961 85870029 -3634524 + MIR SINE MIR 87 152 -110 325 319 138 19 chr17 85871367 85871577 -3632976 - L3 LINE CR1 -11 1566 1332 216 320 146 0 chr17 85872491 85872594 -3631959 - MIR3 SINE MIR -10 198 81 298 275 25 0 chr17 85873719 85873799 -3630754 + L2 LINE L2 3181 3262 -10 500 324 108 9 chr17 85873827 85874049 -3630504 - MIR SINE MIR 0 262 19 726 179 70 0 chr17 85874348 85874504 -3630049 + MER63A DNA MER1_type 2 168 -42 226 166 6 131 chr17 85875754 85875929 -3628624 + (TG)n Simple_repeat Simple_repeat 1 153 0 450 144 22 0 chr17 85876296 85876386 -3628167 + Charlie4 DNA MER1_type 1811 1902 -59 225 0 0 0 chr17 85876934 85876959 -3627594 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 203 315 11 45 chr17 85878039 85878128 -3626425 - L2 LINE L2 0 3272 3187 220 250 226 0 chr17 85879226 85879310 -3625243 + MER5A DNA MER1_type 4 106 -83 252 289 39 48 chr17 85880619 85880723 -3623830 - L3b LINE CR1 -208 1375 1273 180 0 0 0 chr17 85881910 85881930 -3622623 + (CA)n Simple_repeat Simple_repeat 1 20 0 242 202 125 58 chr17 85882015 85882119 -3622434 - MER20 DNA MER1_type -108 111 1 448 260 11 28 chr17 85883273 85883454 -3621099 + (CA)n Simple_repeat Simple_repeat 1 178 0 367 292 0 14 chr17 85883471 85883615 -3620938 + (CA)n Simple_repeat Simple_repeat 2 143 0 182 265 6 18 chr17 85883627 85883797 -3620756 + (CA)n Simple_repeat Simple_repeat 1 168 0 365 327 18 20 chr17 85884537 85884718 -3619835 - MIR SINE MIR -62 146 1 340 271 22 64 chr17 85884837 85885009 -3619544 - MIR SINE MIR -62 146 18 228 281 61 28 chr17 85885218 85885329 -3619224 - MIR SINE MIR -61 147 31 378 286 43 7 chr17 85886336 85886476 -3618077 + MIR SINE MIR 79 223 -39 239 296 96 9 chr17 85889323 85889438 -3615115 + MIR3 SINE MIR 44 168 -40 246 143 125 0 chr17 85889939 85889995 -3614558 - MER5A DNA MER1_type -77 112 50 761 251 6 11 chr17 85890005 85890180 -3614373 - MER5B DNA MER1_type -2 176 3 1471 110 6 158 chr17 85890521 85890876 -3613677 - MER1B DNA MER1_type 0 339 39 259 229 100 0 chr17 85890898 85890968 -3613585 + MER20 DNA MER1_type 68 144 -75 220 259 247 0 chr17 85891996 85892081 -3612472 - MIR SINE MIR -118 144 39 347 297 61 20 chr17 85893177 85893325 -3611228 + MIR SINE MIR 39 192 -70 203 86 0 29 chr17 85894624 85894659 -3609894 + (TGGGGG)n Simple_repeat Simple_repeat 4 37 0 2245 102 3 0 chr17 85896170 85896475 -3608078 + AluSg SINE Alu 1 306 -4 294 383 102 22 chr17 85896806 85897058 -3607495 + L2 LINE L2 2972 3249 -23 2182 132 0 0 chr17 85897058 85897362 -3607191 - AluSq SINE Alu -6 307 4 294 383 102 22 chr17 85897362 85897383 -3607170 + L2 LINE L2 3249 3267 -5 252 0 0 0 chr17 85897384 85897412 -3607141 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 208 256 0 60 chr17 85898250 85898367 -3606186 + (TG)n Simple_repeat Simple_repeat 2 111 0 503 223 101 14 chr17 85899622 85899761 -3604792 - MIR SINE MIR -43 219 69 1769 182 3 3 chr17 85899771 85900101 -3604452 - MLT1B LTR MaLR -32 358 29 713 287 15 0 chr17 85901301 85901503 -3603050 - MER58A DNA MER1_type -19 205 1 469 305 190 19 chr17 85903596 85903934 -3600619 - L2 LINE L2 -20 3252 2973 180 0 0 0 chr17 85903934 85903954 -3600599 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 469 305 190 19 chr17 85903954 85904087 -3600466 - L2 LINE L2 -299 2973 2678 265 274 222 26 chr17 85904428 85904581 -3599972 + MIR3 SINE MIR 19 201 -7 200 185 0 93 chr17 85905392 85905446 -3599107 + polypyrimidine Low_complexity Low_complexity 1 49 0 310 294 16 0 chr17 85906095 85906221 -3598332 + C-rich Low_complexity Low_complexity 1 128 0 186 338 39 0 chr17 85906745 85906822 -3597731 - MIR SINE MIR -60 148 69 354 169 0 0 chr17 85907214 85907279 -3597274 + (TGGA)n Simple_repeat Simple_repeat 2 66 0 2764 284 132 28 chr17 85907279 85908798 -3595755 + L2 LINE L2 1017 2692 -622 225 243 43 0 chr17 85908833 85908903 -3595650 + L2 LINE L2 2834 2906 -366 5569 95 9 5 chr17 85908926 85909796 -3594757 + L1MA2 LINE L1 5369 6242 -62 1800 159 9 19 chr17 85910713 85911028 -3593525 + AluJb SINE Alu 1 312 0 198 314 29 14 chr17 85911373 85911443 -3593110 - MIR3 SINE MIR -46 162 92 262 243 0 9 chr17 85912300 85912411 -3592142 + (TGGA)n Simple_repeat Simple_repeat 4 113 0 204 333 53 0 chr17 85912423 85912498 -3592055 + polypurine Low_complexity Low_complexity 4 82 0 215 158 26 0 chr17 85912459 85912497 -3592056 + GA-rich Low_complexity Low_complexity 4 42 0 53 101 0 0 chr17 85912584 85912763 -3591790 + GC_rich Low_complexity Low_complexity 1 179 0 258 213 53 53 chr17 85916737 85916831 -3587722 - MIR SINE MIR -68 140 47 643 190 44 7 chr17 85917531 85917668 -3586885 + L1MB7 LINE L1 6034 6175 -9 291 287 164 8 chr17 85917818 85917940 -3586613 + MIR SINE MIR 93 233 -29 740 247 27 23 chr17 85920329 85920611 -3583942 + L1MB7 LINE L1 5889 6160 -14 312 358 74 11 chr17 85920611 85920787 -3583766 + HAL1 LINE L1 1090 1276 -1231 636 79 48 8 chr17 85920789 85920915 -3583638 + GA-rich Low_complexity Low_complexity 4 134 0 196 287 101 23 chr17 85921454 85921583 -3582970 + L2 LINE L2 2686 2824 -490 891 230 88 0 chr17 85921775 85922039 -3582514 + MER33 DNA MER1_type 1 286 -38 936 236 0 10 chr17 85922085 85922293 -3582260 - MER58A DNA MER1_type 0 224 19 31 26 0 0 chr17 85922344 85922382 -3582171 + AT_rich Low_complexity Low_complexity 1 38 0 635 158 0 0 chr17 85922382 85922477 -3582076 - FLAM_C SINE Alu -34 109 15 554 159 0 11 chr17 85922472 85922560 -3581993 - AluJ/FLAM SINE Alu -225 87 1 * 2280 96 0 10 chr17 85922620 85922934 -3581619 + AluSx SINE Alu 1 311 -1 829 240 34 53 chr17 85923404 85923661 -3580892 + MER33 DNA MER1_type 10 270 -2315 2119 81 0 4 chr17 85923661 85923934 -3580619 + AluSx SINE Alu 4 275 -37 240 100 0 0 chr17 85923939 85923979 -3580574 + (CATA)n Simple_repeat Simple_repeat 2 41 0 829 240 34 53 chr17 85923979 85924036 -3580517 + MER33 DNA MER1_type 274 324 0 278 361 186 8 chr17 85924055 85924307 -3580246 - L3 LINE CR1 -102 1475 1179 335 229 28 0 chr17 85924971 85925115 -3579438 + (CA)n Simple_repeat Simple_repeat 1 148 0 443 269 29 6 chr17 85925130 85925305 -3579248 + (CA)n Simple_repeat Simple_repeat 1 179 0 272 213 33 0 chr17 85925375 85925497 -3579056 + (CA)n Simple_repeat Simple_repeat 2 127 0 180 321 36 24 chr17 85925995 85926079 -3578474 - MIR SINE MIR -115 147 63 196 374 109 7 chr17 85926709 85926856 -3577697 + L2 LINE L2 3102 3263 -9 406 302 17 0 chr17 85929202 85929318 -3575235 + MIR SINE MIR 22 139 -123 390 21 0 0 chr17 85932696 85932743 -3571810 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr17 85933273 85933294 -3571259 + GC_rich Low_complexity Low_complexity 1 21 0 39 60 0 0 chr17 85933771 85933838 -3570715 + GC_rich Low_complexity Low_complexity 1 67 0 210 231 16 58 chr17 85933870 85933991 -3570562 + G-rich Low_complexity Low_complexity 6 121 0 22 35 0 0 chr17 85934103 85934132 -3570421 + GC_rich Low_complexity Low_complexity 1 29 0 225 214 0 0 chr17 85934427 85934469 -3570084 + (TG)n Simple_repeat Simple_repeat 2 43 0 308 291 64 43 chr17 85935529 85935670 -3568883 + MIR3 SINE MIR 33 176 -32 423 297 104 30 chr17 85936553 85936755 -3567798 - L2 LINE L2 -21 3251 3035 317 296 151 21 chr17 85939887 85940073 -3564480 - MIR SINE MIR 0 262 53 2296 100 3 0 chr17 85940865 85941175 -3563378 + AluSq SINE Alu 1 311 -2 260 384 85 14 chr17 85941225 85941436 -3563117 - L3b LINE CR1 -20 1563 1338 2251 90 3 13 chr17 85945059 85945360 -3559193 + AluSx SINE Alu 1 298 -14 198 0 0 0 chr17 85945548 85945570 -3558983 + (TG)n Simple_repeat Simple_repeat 1 22 0 650 226 81 27 chr17 85945570 85945791 -3558762 + Charlie5 DNA MER1_type 2392 2624 0 2054 134 0 19 chr17 85945903 85946216 -3558337 + AluSx SINE Alu 1 307 -5 401 263 103 67 chr17 85947105 85947332 -3557221 + MIR SINE MIR 29 260 -2 214 241 19 0 chr17 85947328 85947382 -3557171 - L2 LINE L2 -4 3309 3255 * 2334 81 0 19 chr17 85948166 85948474 -3556079 - AluSx SINE Alu 0 312 11 2210 123 0 10 chr17 85949408 85949718 -3554835 - AluSx SINE Alu -5 307 1 284 262 131 0 chr17 85950422 85950529 -3554024 - MER3 DNA MER1_type -53 156 36 225 255 0 0 chr17 85950618 85950665 -3553888 + MIR SINE MIR 103 149 -113 2405 82 0 7 chr17 85950668 85950973 -3553580 + AluSx SINE Alu 1 303 -9 240 35 0 0 chr17 85951881 85951910 -3552643 + (CAA)n Simple_repeat Simple_repeat 2 30 0 246 333 81 0 chr17 85953310 85953409 -3551144 - MIR SINE MIR -77 185 79 449 226 70 32 chr17 85953704 85953890 -3550663 + LTR16C LTR ERVL 299 491 0 293 244 14 60 chr17 85954135 85954423 -3550130 + G-rich Low_complexity Low_complexity 1 274 0 2386 346 65 36 chr17 85955399 85957160 -3547393 + ERVL LTR ERVL 1340 3152 -2612 482 335 49 29 chr17 85957474 85957823 -3546730 + LTR16C LTR ERVL 136 491 0 2507 57 0 13 chr17 85959594 85959908 -3544645 - AluY SINE Alu -1 310 1 203 316 149 35 chr17 85960229 85960343 -3544210 + L2 LINE L2 3126 3252 -20 2496 60 0 13 chr17 85960424 85960738 -3543815 + AluY SINE Alu 1 310 -1 262 364 88 27 chr17 85961096 85961357 -3543196 - L1ME LINE L1 -232 5889 5613 283 278 37 19 chr17 85962587 85962695 -3541858 - L2 LINE L2 -17 3255 3146 192 40 0 0 chr17 85962969 85962994 -3541559 + (CTGGGG)n Simple_repeat Simple_repeat 2 26 0 2070 108 0 7 chr17 85963582 85963869 -3540684 - AluSx SINE Alu -27 285 1 441 263 14 9 chr17 85967467 85967619 -3536934 - MIR SINE MIR -55 153 3 306 319 77 40 chr17 85968150 85968398 -3536155 - L2 LINE L2 0 3272 3016 213 108 0 0 chr17 85970117 85970154 -3534399 + (CA)n Simple_repeat Simple_repeat 1 37 0 215 267 0 23 chr17 85971068 85971154 -3533399 + CT-rich Low_complexity Low_complexity 2 85 0 221 298 74 41 chr17 85973047 85973168 -3531385 + MIR SINE MIR 59 183 -79 215 371 0 8 chr17 85973942 85974066 -3530487 + (CA)n Simple_repeat Simple_repeat 2 124 0 831 346 105 58 chr17 85974847 85975771 -3528782 - L3 LINE CR1 -28 1549 583 2075 133 3 0 chr17 85976001 85976302 -3528251 - AluSx SINE Alu -10 302 1 748 345 61 18 chr17 85976467 85977049 -3527504 - L2 LINE L2 -10 3303 2692 503 337 36 20 chr17 85977289 85977485 -3527068 + MIR SINE MIR 20 218 -44 213 317 0 0 chr17 85977751 85977811 -3526742 + CT-rich Low_complexity Low_complexity 4 63 0 2213 98 3 19 chr17 85979658 85979975 -3524578 + AluSx SINE Alu 1 312 0 319 104 0 0 chr17 85979986 85980034 -3524519 + Alu SINE Alu 1 48 -252 1764 167 3 19 chr17 85980310 85980627 -3523926 + AluSx SINE Alu 1 312 0 2203 119 0 7 chr17 85980639 85980949 -3523604 + AluSx SINE Alu 1 308 -4 370 348 32 0 chr17 85981141 85981284 -3523269 + MIR SINE MIR 47 192 -62 2208 90 0 3 chr17 85981623 85981923 -3522630 - AluSg SINE Alu -11 299 1 1465 268 65 17 chr17 85982246 85982843 -3521710 + L1ME1 LINE L1 29 654 -5742 1138 222 57 3 chr17 85982867 85983218 -3521335 + L1ME1 LINE L1 4257 4626 -1589 1607 130 87 16 chr17 85983226 85983549 -3521004 - THE1C LTR MaLR 0 375 30 1766 243 14 25 chr17 85983553 85984068 -3520485 + L1ME1 LINE L1 4621 5129 -1086 2583 274 27 16 chr17 85984079 85984893 -3519660 + L1ME1 LINE L1 5409 6231 -4 2292 77 7 0 chr17 85984974 85985271 -3519282 - AluSq SINE Alu -14 299 1 237 136 91 0 chr17 85985994 85986038 -3518515 + Tigger5 DNA MER2_type 1 48 -2275 2279 93 7 3 chr17 85986086 85986396 -3518157 - AluSx SINE Alu -1 311 1 464 172 0 21 chr17 85986396 85986480 -3518073 + Tigger5 DNA MER2_type 2238 2321 -2 1506 141 31 8 chr17 85987656 85987912 -3516641 - AluSx SINE Alu -7 305 44 731 233 6 0 chr17 85988312 85988488 -3516065 - L1MB4 LINE L1 0 6180 6004 402 289 84 36 chr17 85988669 85988835 -3515718 - MIR SINE MIR -12 250 77 2235 108 0 0 chr17 85989304 85989601 -3514952 - AluSx SINE Alu -15 297 1 315 281 102 39 chr17 85991030 85991158 -3513395 + L2 LINE L2 3136 3271 -1 204 255 235 0 chr17 85991879 85991981 -3512572 - MIR SINE MIR -13 249 124 2308 86 0 19 chr17 85992015 85992330 -3512223 - AluY SINE Alu -2 309 1 1621 174 3 17 chr17 85992353 85992506 -3512047 - AluJo SINE Alu -22 290 141 231 88 0 0 chr17 85992506 85992540 -3512013 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1621 174 3 17 chr17 85992540 85992680 -3511873 - AluJo SINE Alu -171 141 1 1514 186 19 30 chr17 85992999 85993371 -3511182 - MLT1A2 LTR MaLR -1 373 6 38 39 0 0 chr17 85993737 85993789 -3510764 + AT_rich Low_complexity Low_complexity 1 52 0 300 211 0 0 chr17 85993899 85993975 -3510578 + GA-rich Low_complexity Low_complexity 2 77 0 453 317 9 71 chr17 85994354 85994578 -3509975 - MIR SINE MIR -4 258 49 197 231 77 15 chr17 85995125 85995190 -3509363 - MIR SINE MIR -135 127 59 1089 251 58 24 chr17 85995465 85995844 -3508709 + MLT1C LTR MaLR 72 463 -4 666 148 39 31 chr17 85996063 85996421 -3508132 + CT-rich Low_complexity Low_complexity 1 360 0 1209 154 96 0 chr17 85996431 85996651 -3507902 - AluSg/x SINE Alu -1 311 71 468 175 3 0 chr17 85996781 85996795 -3507758 - L1MB5 LINE L1 -349 5825 5813 607 183 52 0 chr17 85996795 85996910 -3507643 - L1MB3 LINE L1 -3 6180 6060 468 175 3 0 chr17 85996910 85996995 -3507558 - L1MB5 LINE L1 -361 5813 5741 2021 122 17 0 chr17 85996996 85997291 -3507262 - AluSx SINE Alu -11 301 2 2127 126 3 0 chr17 85998677 85998978 -3505575 - AluSx SINE Alu -10 302 1 386 238 123 8 chr17 85999204 85999326 -3505227 + MIR SINE MIR 99 234 -28 1086 110 6 0 chr17 85999588 85999752 -3504801 - AluY SINE Alu 0 311 147 1779 233 28 8 chr17 86000743 86001240 -3503313 + MER74A LTR ERVL 13 519 -39 219 139 0 0 chr17 86002107 86002143 -3502410 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 * 260 68 0 45 chr17 86002141 86002185 -3502368 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 1594 127 117 14 chr17 86002187 86002470 -3502083 - AluSx SINE Alu 0 312 1 346 323 227 15 chr17 86003382 86003849 -3500704 + L2 LINE L2 1940 2505 -809 492 279 87 0 chr17 86003863 86004035 -3500518 + MLT1D LTR MaLR 283 469 -36 25 31 0 0 chr17 86004881 86004913 -3499640 + AT_rich Low_complexity Low_complexity 1 32 0 411 364 78 23 chr17 86005140 86005357 -3499196 - MIR SINE MIR -14 248 20 312 27 0 0 chr17 86006583 86006620 -3497933 + (TG)n Simple_repeat Simple_repeat 2 38 0 24 0 0 0 chr17 86007689 86007713 -3496840 + AT_rich Low_complexity Low_complexity 1 24 0 234 143 0 107 chr17 86007984 86008004 -3496549 + (GAAAA)n Simple_repeat Simple_repeat 4 25 -28 2160 105 0 13 chr17 86008004 86008319 -3496234 + AluSx SINE Alu 2 312 0 234 143 0 107 chr17 86008319 86008354 -3496199 + (GAAAA)n Simple_repeat Simple_repeat 25 53 0 2090 147 0 0 chr17 86008941 86009248 -3495305 - AluSx SINE Alu -5 307 1 23 0 0 0 chr17 86009270 86009293 -3495260 + AT_rich Low_complexity Low_complexity 1 23 0 285 339 57 8 chr17 86011166 86011290 -3493263 - MIR SINE MIR -29 233 104 349 337 74 65 chr17 86012259 86012689 -3491864 + L2 LINE L2 2879 3312 -1 366 233 58 0 chr17 86012944 86013047 -3491506 - MER5A DNA MER1_type -77 112 4 246 261 261 0 chr17 86015038 86015126 -3489427 + L2 LINE L2 3200 3310 -3 976 207 105 76 chr17 86015138 86015461 -3489092 + MLT1C LTR MaLR 7 319 -148 2022 102 60 0 chr17 86015461 86015744 -3488809 - AluSq SINE Alu -13 300 1 854 148 0 8 chr17 86015744 86015872 -3488681 - AluJo/FLAM SINE Alu -174 128 2 976 207 105 76 chr17 86015872 86015990 -3488563 + MLT1C LTR MaLR 318 467 0 966 280 52 25 chr17 86017897 86018521 -3486032 + MER21B LTR ERV1 40 716 -147 281 324 19 0 chr17 86018624 86018729 -3485824 + MIR3 SINE MIR 91 197 -11 2160 134 0 0 chr17 86018754 86019059 -3485494 - AluSx SINE Alu -7 305 1 226 340 61 14 chr17 86019672 86019819 -3484734 - L3 LINE CR1 -162 1415 1262 1259 212 114 40 chr17 86020330 86020750 -3483803 + MLT1C LTR MaLR 17 467 0 416 343 141 16 chr17 86021395 86021969 -3482584 + L2 LINE L2 1978 2623 -691 311 265 82 0 chr17 86022222 86022320 -3482233 - MIR SINE MIR -107 155 50 236 128 0 21 chr17 86022320 86022367 -3482186 + (TTTTC)n Simple_repeat Simple_repeat 1 46 0 473 199 6 114 chr17 86022374 86022447 -3482106 - MER45A DNA AcHobo -1403 178 131 2339 84 0 0 chr17 86022447 86022745 -3481808 - AluSq SINE Alu -15 298 1 473 199 6 114 chr17 86022745 86022837 -3481716 - MER45A DNA AcHobo -1450 131 31 263 319 35 0 chr17 86023026 86023133 -3481420 + MIR SINE MIR 58 172 -75 493 250 81 19 chr17 86025633 86025793 -3478760 + MIR SINE MIR 74 243 -19 426 146 0 0 chr17 86026466 86026548 -3478005 + (TC)n Simple_repeat Simple_repeat 1 82 0 1942 239 59 5 chr17 86027187 86027760 -3476793 + L1MB7 LINE L1 5581 6184 0 2185 110 3 0 chr17 86027773 86028082 -3476471 + AluSx SINE Alu 1 310 -2 541 321 41 23 chr17 86028140 86028358 -3476195 - MIR SINE MIR -35 227 6 309 275 22 0 chr17 86030162 86030253 -3474300 - MIR3 SINE MIR -12 196 104 383 246 131 0 chr17 86030345 86030467 -3474086 - MIR SINE MIR -79 183 46 211 210 0 32 chr17 86030486 86030548 -3474005 + G-rich Low_complexity Low_complexity 3 62 0 626 187 11 22 chr17 86031481 86031663 -3472890 + (CA)n Simple_repeat Simple_repeat 1 180 0 322 246 177 23 chr17 86032448 86032578 -3471975 + MIR SINE MIR 36 185 -77 2361 86 0 3 chr17 86034625 86034929 -3469624 - AluSx SINE Alu -1 311 9 2052 118 0 10 chr17 86035912 86036208 -3468345 - AluSx SINE Alu -19 293 1 379 361 44 0 chr17 86036354 86036534 -3468019 + MIR SINE MIR 49 236 -26 2191 115 3 0 chr17 86037047 86037351 -3467202 - AluSx SINE Alu -7 305 1 187 295 85 31 chr17 86039319 86039448 -3465105 + L2 LINE L2 2710 2845 -469 215 293 70 51 chr17 86040195 86040352 -3464201 - L2 LINE L2 -276 2996 2837 425 343 57 52 chr17 86041650 86041898 -3462655 + MIR SINE MIR 2 250 -12 269 278 14 0 chr17 86043808 86043880 -3460673 + L2 LINE L2 3241 3313 0 411 73 0 0 chr17 86043936 86043991 -3460562 + (CA)n Simple_repeat Simple_repeat 2 56 0 362 306 12 44 chr17 86044458 86044618 -3459935 - MIR SINE MIR -27 235 81 820 98 17 40 chr17 86044675 86044849 -3459704 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 2080 99 4 0 chr17 86044849 86045122 -3459431 - AluSx SINE Alu -38 274 1 1771 139 45 3 chr17 86045683 86045970 -3458583 - AluSx SINE Alu -13 299 1 335 41 20 0 chr17 86047651 86047700 -3456853 + (CA)n Simple_repeat Simple_repeat 1 50 0 487 200 4 52 chr17 86048032 86048281 -3456272 + CT-rich Low_complexity Low_complexity 1 237 0 295 296 9 19 chr17 86048384 86048492 -3456061 + C-rich Low_complexity Low_complexity 2 108 0 222 331 58 25 chr17 86049669 86049790 -3454763 - L2 LINE L2 -7 3306 3182 1125 202 66 27 chr17 86050731 86050807 -3453746 + MLT1B LTR MaLR 2 74 -393 1008 280 99 3 chr17 86050807 86051121 -3453432 - MER2 DNA MER2_type 0 344 1 1125 202 66 27 chr17 86051121 86051370 -3453183 + MLT1B LTR MaLR 74 358 -109 2010 131 3 0 chr17 86051370 86051668 -3452885 - AluSx SINE Alu -13 299 1 1125 202 66 27 chr17 86051668 86051782 -3452771 + MLT1B LTR MaLR 358 466 -1 1909 220 27 25 chr17 86053124 86053602 -3450951 + L1MB3 LINE L1 5703 6181 -2 472 297 48 52 chr17 86053604 86053833 -3450720 - MIR SINE MIR 0 262 35 2033 83 86 4 chr17 86053862 86054140 -3450413 + AluSq SINE Alu 1 301 -12 183 80 0 0 chr17 86054154 86054179 -3450374 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 22 35 0 0 chr17 86054256 86054285 -3450268 + AT_rich Low_complexity Low_complexity 1 29 0 432 170 152 27 chr17 86054290 86054400 -3450153 + L1MB5 LINE L1 6024 6145 -38 1521 189 4 18 chr17 86054400 86054675 -3449878 + AluJb SINE Alu 15 285 -27 432 170 152 27 chr17 86054675 86054713 -3449840 + L1MB5 LINE L1 6145 6177 -6 357 176 0 0 chr17 86055279 86055353 -3449200 + (TG)n Simple_repeat Simple_repeat 2 75 0 444 325 85 25 chr17 86055677 86056115 -3448438 + L1MC4 LINE L1 5769 6708 -1 183 358 0 0 chr17 86057608 86057675 -3446878 + MIR SINE MIR 27 93 -169 1009 203 167 61 chr17 86060041 86060301 -3444252 + MLT1A1 LTR MaLR 1 305 -60 1931 134 42 0 chr17 86060301 86060585 -3443968 + AluSx SINE Alu 1 296 -16 1009 203 167 61 chr17 86060585 86060654 -3443899 + MLT1A1 LTR MaLR 305 365 0 1433 168 44 21 chr17 86061086 86061424 -3443129 + THE1B LTR MaLR 1 412 -16 1286 202 9 132 chr17 86062349 86062617 -3441936 + MLT2C1 LTR ERVL 3 302 -95 2230 115 0 0 chr17 86062617 86062921 -3441632 + AluSq SINE Alu 1 304 -9 1286 202 9 132 chr17 86062921 86063041 -3441512 + MLT2C1 LTR ERVL 302 333 -64 230 0 33 0 chr17 86063041 86063071 -3441482 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 1286 202 9 132 chr17 86063071 86063122 -3441431 + MLT2C1 LTR ERVL 333 389 -8 314 329 8 17 chr17 86064423 86064547 -3440006 - MIR SINE MIR -57 151 28 209 250 0 0 chr17 86064851 86064895 -3439658 + (CTCA)n Simple_repeat Simple_repeat 1 44 0 351 394 74 5 chr17 86065969 86066185 -3438368 + L1ME3 LINE L1 5677 5907 -255 578 195 37 53 chr17 86068172 86068362 -3436191 + MER53 DNA DNA 3 189 0 267 359 9 0 chr17 86068393 86068499 -3436054 + (CA)n Simple_repeat Simple_repeat 2 108 0 243 360 50 14 chr17 86068599 86068738 -3435815 - MIR SINE MIR -115 147 4 249 341 134 17 chr17 86069303 86069482 -3435071 - L3 LINE CR1 -1196 381 182 2366 88 0 3 chr17 86070039 86070347 -3434206 + AluY SINE Alu 1 307 -4 1206 68 0 6 chr17 86070347 86070503 -3434050 + L1PA4 LINE L1 6001 6155 0 393 170 98 7 chr17 86070967 86071120 -3433433 + (GTCTG)n Simple_repeat Simple_repeat 1 167 0 205 230 106 6 chr17 86071150 86071311 -3433242 + (GGCTG)n Simple_repeat Simple_repeat 2 178 0 * 431 180 98 12 chr17 86071203 86071531 -3433022 + (GTCTG)n Simple_repeat Simple_repeat 1 356 0 380 292 82 46 chr17 86071954 86072149 -3432404 - L3b LINE CR1 -105 1478 1277 2122 120 3 0 chr17 86073172 86073471 -3431082 - AluSx SINE Alu -12 300 1 205 328 0 30 chr17 86077985 86078052 -3426501 - MIR SINE MIR -108 154 90 506 276 51 12 chr17 86078328 86078527 -3426026 - MIR3 SINE MIR -33 175 4 2228 113 0 0 chr17 86079160 86079460 -3425093 - AluSg SINE Alu -10 300 1 306 253 111 10 chr17 86079499 86079598 -3424955 - L2 LINE L2 -199 3073 2965 506 313 33 43 chr17 86079824 86080035 -3424518 + MER3 DNA MER1_type 1 209 0 225 273 0 0 chr17 86081564 86081619 -3422934 + (TG)n Simple_repeat Simple_repeat 2 56 0 362 332 98 48 chr17 86084035 86084568 -3419985 + L1MEd LINE L1 802 1443 -4929 352 273 14 56 chr17 86086193 86086336 -3418217 + MIR SINE MIR 107 243 -19 237 132 0 0 chr17 86086831 86086869 -3417684 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 180 300 0 0 chr17 86086916 86086956 -3417597 - MIR SINE MIR -105 157 118 2144 112 0 0 chr17 86087571 86087910 -3416643 + AluSx SINE Alu 1 339 0 2076 113 7 0 chr17 86088304 86088597 -3415956 + AluSx SINE Alu 1 295 -17 2215 108 0 0 chr17 86089128 86089425 -3415128 - AluSx SINE Alu -15 297 1 1915 164 7 3 chr17 86090236 86090541 -3414012 - AluJo SINE Alu -5 307 2 188 267 0 0 chr17 86090627 86090672 -3413881 + MER5A DNA MER1_type 32 76 -113 642 245 7 0 chr17 86090724 86090863 -3413690 - MER5A DNA MER1_type -42 147 8 229 381 58 35 chr17 86090894 86091067 -3413486 + MIR3 SINE MIR 26 202 -6 2419 90 0 0 chr17 86091202 86091513 -3413040 + AluSx SINE Alu 1 311 -1 312 376 6 6 chr17 86092327 86092505 -3412048 + (CATG)n Simple_repeat Simple_repeat 3 180 0 354 80 0 0 chr17 86094139 86094189 -3410364 + (GA)n Simple_repeat Simple_repeat 1 50 0 1961 118 31 10 chr17 86094429 86094741 -3409812 + AluSx SINE Alu 1 312 0 362 306 139 3 chr17 86094878 86095102 -3409451 - MIR SINE MIR -8 254 14 485 330 107 40 chr17 86095540 86095717 -3408836 + L2 LINE L2 1652 1816 -1498 285 75 0 0 chr17 86095717 86095757 -3408796 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2043 124 0 3 chr17 86095759 86096041 -3408512 - AluSx SINE Alu -31 281 1 485 330 107 40 chr17 86096041 86096336 -3408217 + L2 LINE L2 1816 2159 -1155 624 268 40 18 chr17 86096372 86096596 -3407957 - L1M4 LINE L1 -2712 3434 3206 508 303 111 45 chr17 86096593 86097095 -3407458 - L1ME LINE L1 -595 5638 5170 * 1969 116 22 7 chr17 86097095 86097408 -3407145 - AluSx SINE Alu 0 317 1 508 303 111 45 chr17 86097408 86098257 -3406296 - L1ME LINE L1 -1063 5170 4199 334 327 19 24 chr17 86098274 86098485 -3406068 - HAL1b LINE L1 -808 540 331 688 377 58 41 chr17 86098488 86099079 -3405474 - L1ME LINE L1 -4985 1411 811 2165 99 16 0 chr17 86099758 86100061 -3404492 - AluSq SINE Alu -5 308 1 359 314 96 45 chr17 86100072 86100384 -3404169 + L2 LINE L2 2330 2657 -657 218 222 0 42 chr17 86100607 86100679 -3403874 + CT-rich Low_complexity Low_complexity 6 74 0 385 302 94 31 chr17 86101346 86101601 -3402952 + LTR33A LTR ERVL 253 523 0 429 211 22 0 chr17 86101664 86101754 -3402799 - MER81 DNA DNA 0 114 23 1897 225 39 81 chr17 86102095 86102600 -3401953 - L1MB5 LINE L1 -165 6009 5490 519 139 128 0 chr17 86102600 86102686 -3401867 - AluSg/x SINE Alu -16 293 197 1897 225 39 81 chr17 86102686 86103066 -3401487 - L1MB5 LINE L1 -684 5490 5095 2325 124 114 8 chr17 86103308 86103695 -3400858 + MSTA LTR MaLR 1 428 0 238 178 0 0 chr17 86104387 86104432 -3400121 - L1M3 LINE L1 -472 5708 5664 1154 228 19 19 chr17 86105174 86105490 -3399063 - L1MC1 LINE L1 -1 6332 6017 2079 138 0 0 chr17 86106770 86107066 -3397487 - AluSx SINE Alu -16 296 1 1060 249 94 25 chr17 86108457 86108862 -3395691 - MLT1C LTR MaLR -34 433 1 358 254 69 8 chr17 86110121 86110251 -3394302 + MLT1C LTR MaLR 329 466 -1 321 364 104 0 chr17 86111018 86111238 -3393315 + MIR SINE MIR 6 248 -14 2374 76 16 0 chr17 86112060 86112364 -3392189 - AluY SINE Alu -2 309 1 309 233 48 48 chr17 86113593 86113696 -3390857 - L1MC4 LINE L1 -140 7902 7800 1020 283 70 26 chr17 86113698 86113748 -3390805 - L1ME2 LINE L1 0 6164 6118 1825 138 76 0 chr17 86113748 86114038 -3390515 + AluSx SINE Alu 1 312 0 1020 283 70 26 chr17 86114038 86114443 -3390110 - L1ME2 LINE L1 -46 6118 5689 2155 108 7 0 chr17 86115298 86115595 -3388958 - AluSq SINE Alu -14 299 1 422 352 13 0 chr17 86116297 86116456 -3388097 + MIR SINE MIR 23 183 -79 2506 250 26 23 chr17 86117120 86117809 -3386744 - L1MB5 LINE L1 -8 6166 5476 659 214 82 93 chr17 86118652 86118932 -3385621 + MLT1E3 LTR MaLR 39 315 -309 346 300 15 0 chr17 86119255 86119388 -3385165 + MIR SINE MIR 30 164 -64 270 278 105 91 chr17 86119645 86119998 -3384555 + L2 LINE L2 2890 3247 -25 182 229 0 0 chr17 86120078 86120113 -3384440 + L2 LINE L2 3237 3271 -1 378 228 30 19 chr17 86120186 86120672 -3383881 + (TG)n Simple_repeat Simple_repeat 1 491 0 395 230 34 14 chr17 86120683 86120985 -3383568 + (TG)n Simple_repeat Simple_repeat 1 308 0 376 194 44 6 chr17 86121026 86121186 -3383367 + (TG)n Simple_repeat Simple_repeat 1 166 0 186 191 0 0 chr17 86122861 86122903 -3381650 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 2000 134 7 0 chr17 86126407 86126699 -3377854 + AluJo SINE Alu 1 294 -18 982 179 11 0 chr17 86127003 86127187 -3377366 - MER53 DNA DNA -3 186 1 2179 132 0 0 chr17 86127672 86127983 -3376570 + AluSx SINE Alu 1 311 -1 1645 169 29 0 chr17 86128189 86128461 -3376092 + AluJo SINE Alu 1 280 -32 239 0 0 31 chr17 86128461 86128493 -3376060 + (TAA)n Simple_repeat Simple_repeat 2 32 0 314 291 137 17 chr17 86128512 86128629 -3375924 + L1 LINE L1 3141 3271 -2875 1231 90 0 0 chr17 86128775 86128957 -3375596 - AluSg/x SINE Alu 0 310 129 235 298 108 81 chr17 86131333 86131742 -3372811 + L2 LINE L2 2243 2662 -652 215 261 244 11 chr17 86131801 86131977 -3372576 + L2 LINE L2 2836 3052 -261 188 298 8 81 chr17 86132336 86132460 -3372093 + L2 LINE L2 3151 3265 -7 218 195 0 0 chr17 86133045 86133086 -3371467 + (CA)n Simple_repeat Simple_repeat 1 41 0 568 269 187 8 chr17 86134712 86135088 -3369465 + LTR16A LTR ERVL 3 444 -6 728 162 17 12 chr17 86135129 86135302 -3369251 + CT-rich Low_complexity Low_complexity 1 174 0 310 233 14 9 chr17 86136695 86136848 -3367705 - ORSL DNA AcHobo -50 225 42 468 326 0 6 chr17 86138334 86138693 -3365860 + (CA)n Simple_repeat Simple_repeat 1 356 0 248 232 0 0 chr17 86138722 86138778 -3365775 + (CA)n Simple_repeat Simple_repeat 1 56 0 214 234 62 0 chr17 86141221 86141285 -3363268 - MIR SINE MIR -60 148 81 2192 92 3 16 chr17 86141766 86142082 -3362471 - AluSq SINE Alu -1 312 1 378 0 0 0 chr17 86143278 86143320 -3361233 + (CA)n Simple_repeat Simple_repeat 2 43 0 823 296 5 0 chr17 86143753 86143959 -3360594 + MIR SINE MIR 45 251 -11 345 322 6 11 chr17 86145103 86145280 -3359273 + (CA)n Simple_repeat Simple_repeat 2 177 0 192 273 0 0 chr17 86145308 86145396 -3359157 + (CA)n Simple_repeat Simple_repeat 2 89 0 702 213 122 0 chr17 86145838 86146026 -3358527 - ORSL DNA AcHobo -61 214 4 1015 276 49 0 chr17 86148817 86148898 -3355655 - MER33 DNA MER1_type -2261 324 248 2206 121 0 3 chr17 86148898 86149204 -3355349 + AluSc SINE Alu 1 305 -4 1015 276 49 0 chr17 86149204 86149430 -3355123 - MER33 DNA MER1_type -2337 248 2 387 0 0 0 chr17 86150950 86150993 -3353560 + (CA)n Simple_repeat Simple_repeat 2 44 0 347 276 104 8 chr17 86154328 86154462 -3350091 - MIR SINE MIR -115 147 1 306 297 0 0 chr17 86155790 86155935 -3348618 + (TG)n Simple_repeat Simple_repeat 1 145 0 231 290 0 0 chr17 86155984 86156084 -3348469 + (TG)n Simple_repeat Simple_repeat 2 101 0 317 258 11 11 chr17 86157382 86157475 -3347078 - MER63 DNA MER1_type -327 735 17 384 333 16 0 chr17 86157553 86157679 -3346874 - MER5A DNA MER1_type -61 128 1 1945 100 4 0 chr17 86158397 86158657 -3345896 - AluSq SINE Alu -14 299 39 200 336 118 32 chr17 86158964 86159184 -3345369 + L2 LINE L2 2563 2801 -513 400 357 32 0 chr17 86159246 86159400 -3345153 + MIR SINE MIR 20 178 -84 246 341 0 24 chr17 86159546 86159631 -3344922 + (CGTG)n Simple_repeat Simple_repeat 1 83 0 221 313 42 31 chr17 86159727 86159823 -3344730 + MIR3 SINE MIR 83 179 -29 271 229 140 63 chr17 86159972 86160074 -3344479 + MIR SINE MIR 51 158 -62 422 273 45 9 chr17 86160176 86160286 -3344267 + MIR SINE MIR 1 114 -148 836 282 103 26 chr17 86160388 86160768 -3343785 + MLT1I LTR MaLR 1 409 0 345 213 36 0 chr17 86160933 86161027 -3343526 + L1MA4A LINE L1 6060 6274 0 419 287 115 0 chr17 86163523 86163697 -3340856 - MIR SINE MIR -22 240 47 573 247 143 0 chr17 86164667 86164821 -3339732 - MER45A DNA AcHobo 0 178 3 2070 94 0 42 chr17 86165119 86165427 -3339126 + AluSc SINE Alu 1 295 -14 722 268 24 19 chr17 86166395 86166608 -3337945 + MER20 DNA MER1_type 1 214 -5 1204 256 72 21 chr17 86166757 86167186 -3337367 + MLT1C LTR MaLR 9 459 -8 216 147 0 0 chr17 86167205 86167239 -3337314 - MIR SINE MIR -114 148 115 890 128 0 0 chr17 86167340 86167465 -3337088 - AluSq/x SINE Alu -188 125 1 2301 112 0 0 chr17 86168142 86168454 -3336099 + AluSx SINE Alu 1 312 0 402 250 0 0 chr17 86168856 86168976 -3335577 + (CCA)n Simple_repeat Simple_repeat 1 120 0 338 319 143 42 chr17 86168978 86169665 -3334888 + L1M2 LINE L1 487 1242 -5607 204 182 0 0 chr17 86169665 86169709 -3334844 + (CCA)n Simple_repeat Simple_repeat 1 44 0 188 326 142 14 chr17 86170410 86170695 -3333858 + L2 LINE L2 2704 3021 -251 242 246 42 0 chr17 86172004 86172071 -3332482 - MIR SINE MIR -62 146 101 2132 102 3 0 chr17 86172186 86172505 -3332048 - AluSq SINE Alu 0 320 1 230 291 48 0 chr17 86172610 86172713 -3331840 + MER5A DNA MER1_type 6 113 -76 237 229 0 0 chr17 86173192 86173240 -3331313 + (TGG)n Simple_repeat Simple_repeat 1 48 0 774 202 208 11 chr17 86173520 86173703 -3330850 - MER20 DNA MER1_type 0 219 1 572 286 52 42 chr17 86173730 86173943 -3330610 - MIR SINE MIR -8 254 40 486 351 18 6 chr17 86173963 86174131 -3330422 - L2 LINE L2 -1 3312 3143 1494 213 58 42 chr17 86174135 86174586 -3329967 - MLT1C LTR MaLR -4 463 6 201 367 67 8 chr17 86175238 86175358 -3329195 - MIR SINE MIR -31 231 105 1208 246 84 21 chr17 86176949 86177375 -3327178 - MLT1C LTR MaLR -8 459 7 195 129 0 0 chr17 86178858 86178889 -3325664 + (TG)n Simple_repeat Simple_repeat 1 31 0 210 286 0 0 chr17 86179471 86179534 -3325019 + (CA)n Simple_repeat Simple_repeat 1 63 0 2215 82 7 3 chr17 86179541 86179835 -3324718 - AluSx SINE Alu -13 299 5 209 265 0 73 chr17 86180114 86180182 -3324371 - MIR SINE MIR -96 166 104 1395 236 89 16 chr17 86180969 86181418 -3323135 - L1MB7 LINE L1 -59 6125 5644 908 219 48 5 chr17 86182040 86182250 -3322303 + MER20 DNA MER1_type 1 219 0 1726 161 17 42 chr17 86182587 86182941 -3321612 + MER66B LTR ERV1 1 345 -141 691 189 16 63 chr17 86182950 86183141 -3321412 + MER66A LTR ERV1 297 478 0 287 105 65 55 chr17 86183673 86183768 -3320785 - MIR SINE MIR -63 145 45 452 249 32 0 chr17 86185176 86185463 -3319090 + (TAGA)n Simple_repeat Simple_repeat 1 296 0 291 114 0 0 chr17 86185465 86185509 -3319044 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 571 237 11 0 chr17 86185512 86185689 -3318864 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 543 226 24 0 chr17 86185717 86185885 -3318668 + (TGGA)n Simple_repeat Simple_repeat 2 173 0 299 235 0 17 chr17 86185888 86186003 -3318550 + (TAGA)n Simple_repeat Simple_repeat 2 114 0 382 130 14 0 chr17 86189168 86189237 -3315316 - L1MD3 LINE L1 -16 7979 7910 1616 203 69 11 chr17 86189237 86189601 -3314952 + MLT1B LTR MaLR 1 385 -5 466 279 39 0 chr17 86189743 86189872 -3314681 - MER5C DNA MER1_type -186 138 5 234 62 0 0 chr17 86190441 86190473 -3314080 + (CA)n Simple_repeat Simple_repeat 1 32 0 669 200 103 17 chr17 86192100 86192275 -3312278 + MLT1B LTR MaLR 6 195 -195 209 283 0 0 chr17 86192275 86192321 -3312232 + (CA)n Simple_repeat Simple_repeat 1 46 0 557 238 77 60 chr17 86192365 86192600 -3311953 + MLT1B LTR MaLR 213 451 -16 322 269 0 14 chr17 86193456 86193580 -3310973 + GA-rich Low_complexity Low_complexity 2 126 -18 2212 74 3 39 chr17 86193580 86193889 -3310664 + AluSx SINE Alu 15 312 0 2364 68 0 0 chr17 86193893 86194186 -3310367 + AluY SINE Alu 5 297 -14 322 269 0 14 chr17 86194186 86194201 -3310352 + GA-rich Low_complexity Low_complexity 129 144 0 3689 201 31 6 chr17 86196679 86197409 -3307144 + L1MB3 LINE L1 5435 6183 0 239 357 61 0 chr17 86198724 86198822 -3305731 + MIR SINE MIR 62 150 -58 2056 108 3 3 chr17 86199008 86199289 -3305264 + AluSx SINE Alu 1 282 -25 429 20 0 0 chr17 86199289 86199339 -3305214 + (CA)n Simple_repeat Simple_repeat 1 50 0 505 286 114 23 chr17 86199905 86200167 -3304386 + MER77 LTR ERV1 54 339 -266 395 321 53 34 chr17 86200237 86200499 -3304054 + MER77 LTR ERV1 332 598 -7 200 258 0 62 chr17 86201203 86201300 -3303253 + G-rich Low_complexity Low_complexity 2 92 0 521 238 81 12 chr17 86201880 86202040 -3302513 + MLT1B LTR MaLR 1 171 -219 189 196 0 0 chr17 86202058 86202109 -3302444 + CT-rich Low_complexity Low_complexity 1 51 0 696 331 138 13 chr17 86202210 86202675 -3301878 + L2 LINE L2 2202 2724 -590 259 340 49 46 chr17 86203020 86203344 -3301209 + L2 LINE L2 2895 3219 -53 2118 148 140 11 chr17 86203535 86203914 -3300639 + MSTA LTR MaLR 1 428 0 1395 267 74 25 chr17 86204001 86204446 -3300107 + MLT1C LTR MaLR 1 467 0 279 54 0 0 chr17 86205343 86205380 -3299173 + (CA)n Simple_repeat Simple_repeat 1 37 0 409 184 11 11 chr17 86206304 86206391 -3298162 + Tigger5 DNA MER2_type 2237 2323 0 432 362 0 7 chr17 86207391 86207543 -3297010 + MIR SINE MIR 41 191 -71 473 340 13 13 chr17 86208659 86208818 -3295735 + MIR SINE MIR 39 197 -65 299 260 50 40 chr17 86210388 86210488 -3294065 - MIR SINE MIR -78 130 30 183 186 0 0 chr17 86211312 86211355 -3293198 + (CA)n Simple_repeat Simple_repeat 1 43 0 348 261 19 13 chr17 86211372 86211529 -3293024 + (CA)n Simple_repeat Simple_repeat 1 158 0 564 215 93 12 chr17 86212048 86212220 -3292333 - MER20 DNA MER1_type -17 202 17 220 322 139 0 chr17 86212223 86212338 -3292215 + L2 LINE L2 2585 2715 -599 637 238 49 98 chr17 86213992 86214299 -3290254 - L1MD2 LINE L1 -16 6343 6052 23 0 0 0 chr17 86214314 86214337 -3290216 + AT_rich Low_complexity Low_complexity 1 23 0 374 294 5 0 chr17 86216329 86216554 -3287999 + (TG)n Simple_repeat Simple_repeat 1 226 0 376 275 40 34 chr17 86218813 86218962 -3285591 - MIR SINE MIR -7 255 106 262 224 0 0 chr17 86220035 86220093 -3284460 - MLT1H LTR MaLR 0 549 492 2915 230 60 8 chr17 86220097 86220718 -3283835 - MER82 DNA MER2_type 0 653 1 261 0 0 0 chr17 86220748 86220777 -3283776 + (GGCTG)n Simple_repeat Simple_repeat 4 32 0 307 239 37 18 chr17 86220951 86221060 -3283493 - MLT1H LTR MaLR -381 168 58 2176 206 29 6 chr17 86222124 86222634 -3281919 + L1MB3 LINE L1 5623 6144 -39 2292 88 3 0 chr17 86222668 86222965 -3281588 + AluSx SINE Alu 1 298 -14 1048 130 0 41 chr17 86222965 86223134 -3281419 + AluSq SINE Alu 134 295 -18 489 245 0 0 chr17 86223134 86223240 -3281313 - MER82 DNA MER2_type -527 126 21 2136 105 7 0 chr17 86223608 86223903 -3280650 + AluSx SINE Alu 1 297 -15 351 0 0 0 chr17 86224144 86224183 -3280370 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 306 303 49 16 chr17 86224646 86224768 -3279785 + MIR SINE MIR 28 153 -109 402 200 0 0 chr17 86225559 86225639 -3278914 + L1MB3 LINE L1 5901 5980 -203 312 346 10 0 chr17 86226582 86226686 -3277867 + (TG)n Simple_repeat Simple_repeat 1 105 0 822 277 119 29 chr17 86227747 86228422 -3276131 + L2 LINE L2 2563 3311 -2 464 225 121 22 chr17 86229230 86229412 -3275141 + MER21B LTR ERV1 512 711 -152 209 367 155 5 chr17 86230311 86230518 -3274035 + L2 LINE L2 888 1125 -2189 228 330 43 21 chr17 86230525 86230619 -3273934 + L2 LINE L2 2735 2830 -484 729 153 0 0 chr17 86230837 86231013 -3273540 + CT-rich Low_complexity Low_complexity 3 178 0 395 315 8 15 chr17 86231183 86231313 -3273240 + L2 LINE L2 3144 3272 0 205 197 33 49 chr17 86234578 86234639 -3269914 + GA-rich Low_complexity Low_complexity 3 62 0 340 202 48 12 chr17 86235042 86235126 -3269427 + L2 LINE L2 3224 3310 -3 2111 87 0 4 chr17 86235186 86235461 -3269092 + AluY SINE Alu 27 300 -11 206 268 186 0 chr17 86236072 86236169 -3268384 + MIR SINE MIR 20 134 -74 180 382 0 0 chr17 86236180 86236256 -3268297 - L2 LINE L2 -27 3286 3211 252 59 0 0 chr17 86236532 86236566 -3267987 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 204 40 0 0 chr17 86236770 86236795 -3267758 + (A)n Simple_repeat Simple_repeat 1 25 0 2058 141 0 0 chr17 86236820 86237124 -3267429 - AluJb SINE Alu -8 304 1 225 0 0 0 chr17 86238250 86238275 -3266278 + (GA)n Simple_repeat Simple_repeat 2 26 0 283 364 62 0 chr17 86238304 86238433 -3266120 + L2 LINE L2 3177 3313 0 494 62 0 38 chr17 86238555 86238635 -3265918 + (GGGGA)n Simple_repeat Simple_repeat 1 77 0 187 324 63 27 chr17 86239735 86239846 -3264707 + L3b LINE CR1 1289 1403 -180 231 333 28 50 chr17 86239875 86240016 -3264537 + L2 LINE L2 3044 3181 -91 450 257 29 21 chr17 86240307 86240447 -3264106 + L1ME2 LINE L1 6018 6158 -6 764 213 0 10 chr17 86241507 86242129 -3262424 + (TCCA)n Simple_repeat Simple_repeat 1 615 0 646 213 0 22 chr17 86242154 86242337 -3262216 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 784 182 15 0 chr17 86242360 86242629 -3261924 + (TCCA)n Simple_repeat Simple_repeat 1 273 0 603 338 56 17 chr17 86242719 86242953 -3261600 + MIR SINE MIR 19 261 -1 640 260 47 16 chr17 86243014 86243206 -3261347 + MLT1H LTR MaLR 33 230 -319 309 188 188 69 chr17 86243310 86243389 -3261164 + MLT1H LTR MaLR 389 457 -92 2344 85 3 3 chr17 86243389 86243696 -3260857 - AluSp SINE Alu -6 307 1 309 188 188 69 chr17 86243696 86243760 -3260793 + MLT1H LTR MaLR 457 549 0 425 258 66 50 chr17 86245136 86245334 -3259219 + MIR SINE MIR 16 216 -46 1663 191 37 3 chr17 86245355 86245679 -3258874 + L1MB3 LINE L1 5845 6179 -4 2101 138 3 0 chr17 86245992 86246303 -3258250 - AluSx SINE Alu 0 312 1 1293 247 70 19 chr17 86246307 86246736 -3257817 - L1MB3 LINE L1 0 6183 5733 250 113 16 16 chr17 86247358 86247420 -3257133 + (TC)n Simple_repeat Simple_repeat 2 63 0 250 293 50 0 chr17 86249011 86249110 -3255443 + MIR SINE MIR 127 230 -32 265 213 200 0 chr17 86249416 86249496 -3255057 - MLT1K LTR MaLR -346 242 147 569 301 22 27 chr17 86249720 86249903 -3254650 - MIR SINE MIR -80 182 1 221 339 0 46 chr17 86252351 86252460 -3252093 - MIR3 SINE MIR -23 185 82 185 333 158 8 chr17 86252713 86252833 -3251720 + MER5B DNA MER1_type 29 166 -12 308 343 58 0 chr17 86253177 86253314 -3251239 - MER5B DNA MER1_type -29 149 5 215 314 143 0 chr17 86255776 86255881 -3248672 - L3 LINE CR1 -11 1566 1447 401 312 71 29 chr17 86256253 86256459 -3248094 + MIR SINE MIR 35 246 -16 756 240 140 4 chr17 86256670 86256949 -3247604 - LTR16C LTR ERVL 0 491 175 1834 217 83 31 chr17 86257413 86257892 -3246661 + MLT1D LTR MaLR 1 504 -1 754 293 27 15 chr17 86258613 86258876 -3245677 + MER33 DNA MER1_type 1 266 -58 267 114 0 0 chr17 86258979 86259023 -3245530 + (GGGGA)n Simple_repeat Simple_repeat 4 47 0 278 341 157 18 chr17 86259098 86259315 -3245238 - L2 LINE L2 -460 2854 2608 2030 134 20 7 chr17 86259618 86259917 -3244636 + AluSx SINE Alu 1 303 -9 1786 210 100 10 chr17 86260064 86260555 -3243998 + MLT1F LTR MaLR 1 535 -7 2660 145 42 2 chr17 86260783 86261191 -3243362 - MSTB LTR MaLR -2 424 1 382 306 204 25 chr17 86261320 86261595 -3242958 + L2 LINE L2 2990 3313 0 798 170 0 37 chr17 86261810 86261945 -3242608 + FLAM_A SINE Alu 1 130 -3 255 326 0 0 chr17 86263234 86263320 -3241233 + G-rich Low_complexity Low_complexity 4 89 0 261 261 0 0 chr17 86263423 86263538 -3241015 + (CA)n Simple_repeat Simple_repeat 2 116 0 2360 94 0 0 chr17 86264366 86264675 -3239878 + AluSx SINE Alu 1 309 -3 1470 168 35 54 chr17 86264678 86265047 -3239506 + L1MB3 LINE L1 5821 6182 -1 255 321 62 37 chr17 86265330 86265492 -3239061 - L2 LINE L2 -3 3269 3104 357 330 0 0 chr17 86265725 86265825 -3238728 + MIR3 SINE MIR 100 199 -9 788 200 25 25 chr17 86266834 86267034 -3237519 - MER20 DNA MER1_type -15 204 5 327 274 0 0 chr17 86267553 86267728 -3236825 + (TG)n Simple_repeat Simple_repeat 1 175 0 405 240 0 0 chr17 86267748 86267923 -3236630 + (TG)n Simple_repeat Simple_repeat 1 175 0 561 208 0 0 chr17 86267941 86268119 -3236434 + (TG)n Simple_repeat Simple_repeat 1 178 0 329 289 116 0 chr17 86268301 86268422 -3236131 + MER45A DNA AcHobo 44 178 0 266 297 123 0 chr17 86269128 86269266 -3235287 + MIR3 SINE MIR 15 169 -39 742 227 132 22 chr17 86269277 86269700 -3234853 - MER77 LTR ERV1 -18 587 59 387 318 131 0 chr17 86271506 86271682 -3232871 - L1ME LINE L1 -590 5572 5374 485 316 224 41 chr17 86271684 86271948 -3232605 - L1ME LINE L1 -867 5279 4946 2360 81 10 0 chr17 86271948 86272256 -3232297 - AluY SINE Alu 0 311 1 485 316 224 41 chr17 86272256 86272308 -3232245 - L1ME LINE L1 -1200 4946 4905 180 357 9 36 chr17 86272395 86272507 -3232046 - MER5B DNA MER1_type -66 112 4 1237 112 0 0 chr17 86274014 86274175 -3230378 - AluSg/x SINE Alu -18 294 134 2306 72 0 10 chr17 86274175 86274481 -3230072 - AluY SINE Alu -8 303 1 1774 178 71 2 chr17 86274482 86274876 -3229677 - L1MB3 LINE L1 -42 6141 5721 212 262 167 0 chr17 86275245 86275353 -3229200 + MIR SINE MIR 1 125 -83 1577 148 21 100 chr17 86275549 86275888 -3228665 + AluYb8 SINE Alu 1 312 -6 186 355 13 13 chr17 86276098 86276174 -3228379 - MIR SINE MIR -111 151 76 2041 148 33 44 chr17 86276273 86276438 -3228115 - THE1B LTR MaLR -2 362 197 2116 120 19 3 chr17 86276438 86276746 -3227807 + AluSq SINE Alu 1 313 0 2041 148 33 44 chr17 86276746 86276946 -3227607 - THE1B LTR MaLR -167 197 1 226 250 23 80 chr17 86279315 86279403 -3225150 + MLT1C LTR MaLR 1 83 -384 863 275 28 34 chr17 86279879 86280203 -3224350 + MLT1C LTR MaLR 49 370 -97 217 309 53 21 chr17 86280251 86280345 -3224208 + L2 LINE L2 3171 3267 -5 230 243 71 0 chr17 86280508 86280578 -3223975 + L1MC4 LINE L1 7967 8041 -1 753 220 38 93 chr17 86281164 86281400 -3223153 + MER58A DNA MER1_type 2 224 0 966 148 15 8 chr17 86284469 86284733 -3219820 + GA-rich Low_complexity Low_complexity 1 266 0 306 214 14 0 chr17 86284738 86284808 -3219745 - MER58A DNA MER1_type -36 71 1 332 305 7 57 chr17 86284815 86284956 -3219597 + L2 LINE L2 2642 2775 -539 241 239 0 0 chr17 86284959 86285005 -3219548 + polypurine Low_complexity Low_complexity 2 47 0 2133 122 0 0 chr17 86285210 86285504 -3219049 + AluSx SINE Alu 1 294 -18 606 179 13 26 chr17 86286073 86286304 -3218249 + CT-rich Low_complexity Low_complexity 1 228 0 227 235 59 82 chr17 86286543 86286628 -3217925 - L2 LINE L2 -2 3270 3188 320 236 53 64 chr17 86286724 86286883 -3217670 - MLT1J2 LTR MaLR -11 428 251 282 301 146 0 chr17 86286971 86287094 -3217459 - MLT1J2 LTR MaLR -290 160 20 254 246 51 63 chr17 86287200 86287375 -3217178 - L2 LINE L2 -274 2998 2826 363 274 32 64 chr17 86287491 86287710 -3216843 - L1ME3A LINE L1 0 6170 5959 2017 147 0 0 chr17 86287718 86288025 -3216528 + AluSx SINE Alu 2 308 -4 4444 110 36 2 chr17 86288026 86288954 -3215599 + L1PA11 LINE L1 5050 6009 -165 300 177 44 5 chr17 86488992 86489080 -3015473 - AluS SINE Alu -227 76 6 606 247 36 12 chr17 86489286 86489452 -3015101 - MER3 DNA MER1_type 0 209 40 2452 101 0 0 chr17 86489586 86489892 -3014661 - AluSx SINE Alu -4 308 3 954 185 82 35 chr17 86490283 86490515 -3014038 + AluJo SINE Alu 61 303 -9 320 289 0 0 chr17 86490525 86490601 -3013952 + L1M4 LINE L1 4628 4703 -1443 2347 76 10 10 chr17 86490638 86490939 -3013614 + AluY SINE Alu 1 301 -10 382 96 0 0 chr17 86491017 86491069 -3013484 - AluSx SINE Alu -11 290 239 1229 139 0 0 chr17 86491071 86491237 -3013316 - AluSx SINE Alu -115 197 32 676 207 53 7 chr17 86491982 86492132 -3012421 + FRAM SINE Alu 1 157 -9 363 226 0 0 chr17 86492184 86492348 -3012205 + (TG)n Simple_repeat Simple_repeat 2 165 0 392 224 3 0 chr17 86492386 86492737 -3011816 + (TG)n Simple_repeat Simple_repeat 1 352 0 180 226 0 0 chr17 86492788 86492850 -3011703 + (TG)n Simple_repeat Simple_repeat 1 62 0 25 0 0 0 chr17 86493273 86493298 -3011255 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr17 86493599 86493627 -3010926 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr17 86493738 86493777 -3010776 + (A)n Simple_repeat Simple_repeat 1 39 0 2180 140 0 6 chr17 86494452 86494766 -3009787 + AluJb SINE Alu 1 312 0 2223 124 0 0 chr17 86495219 86495525 -3009028 + AluSx SINE Alu 3 308 -4 314 337 65 57 chr17 86495528 86495807 -3008746 - L1M4 LINE L1 -2793 3353 3073 2110 122 3 3 chr17 86496331 86496490 -3008063 - AluSq SINE Alu -17 296 135 2410 64 7 20 chr17 86496490 86496787 -3007766 - AluSc SINE Alu -16 293 1 2110 122 3 3 chr17 86496787 86496915 -3007638 - AluSq SINE Alu -177 136 9 216 261 26 46 chr17 86497358 86497511 -3007042 + G-rich Low_complexity Low_complexity 5 154 0 183 139 0 0 chr17 86497514 86497550 -3007003 + (G)n Simple_repeat Simple_repeat 1 36 0 204 158 0 0 chr17 86497719 86497757 -3006796 + GA-rich Low_complexity Low_complexity 2 39 0 183 271 0 0 chr17 86498193 86498241 -3006312 + MIR SINE MIR 113 160 -102 1061 152 25 0 chr17 86498759 86498957 -3005596 - L1MA5 LINE L1 0 6300 6098 662 105 0 0 chr17 86498959 86499054 -3005499 + AluS SINE Alu 2 96 -217 461 165 0 0 chr17 86499054 86499133 -3005420 - L1MA5 LINE L1 -602 5695 5617 313 231 26 39 chr17 86499411 86499489 -3005064 - L1ME4a LINE L1 -54 6067 5991 2120 126 7 3 chr17 86499553 86499847 -3004706 - AluSq SINE Alu -18 295 1 1282 141 8 103 chr17 86500410 86500478 -3004075 + AluJb SINE Alu 72 145 -167 2220 113 7 0 chr17 86500478 86500770 -3003783 - AluSx SINE Alu -18 294 1 1282 141 8 103 chr17 86500770 86500963 -3003590 + AluJb SINE Alu 145 308 -4 763 249 16 5 chr17 86501036 86501221 -3003332 + MLT1C LTR MaLR 265 451 -16 464 267 8 8 chr17 86501395 86501515 -3003038 - MER45A DNA AcHobo 0 178 59 438 175 88 129 chr17 86501585 86501723 -3002830 + L1MB8 LINE L1 6015 6146 -32 1828 163 3 35 chr17 86501723 86502036 -3002517 - AluJo SINE Alu -9 303 1 438 175 88 129 chr17 86502036 86502068 -3002485 + L1MB8 LINE L1 6146 6178 0 772 114 81 0 chr17 86502084 86502230 -3002323 + FLAM_C SINE Alu 1 156 0 267 137 0 0 chr17 86503046 86503097 -3001456 + Alu SINE Alu 252 302 0 234 0 0 0 chr17 86503382 86503408 -3001145 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1223 199 11 23 chr17 86503413 86503679 -3000874 - AluJo SINE Alu -35 277 15 2026 140 43 28 chr17 86503819 86504212 -3000341 - MER65A LTR ERV1 0 445 47 2179 111 24 0 chr17 86504214 86504512 -3000041 - AluSx SINE Alu -6 306 2 201 387 50 0 chr17 86504642 86504761 -2999792 - MIR SINE MIR -57 205 81 198 0 0 0 chr17 86505203 86505225 -2999328 + (TA)n Simple_repeat Simple_repeat 2 23 0 2155 142 3 0 chr17 86505228 86505539 -2999014 - AluSx SINE Alu 0 312 1 306 215 215 22 chr17 86505715 86505850 -2998703 + MIR SINE MIR 14 174 -88 256 282 29 0 chr17 86506073 86506176 -2998377 + MER5A DNA MER1_type 10 115 -74 1114 97 0 0 chr17 86506291 86506436 -2998117 - AluSg/x SINE Alu -5 305 161 747 261 228 6 chr17 86507181 86507831 -2996722 + L2 LINE L2 2508 3313 0 180 302 19 0 chr17 86507947 86508000 -2996553 - MIR SINE MIR -114 94 41 2340 84 33 0 chr17 86508367 86508720 -2995833 + L1PA8 LINE L1 5805 6168 0 1887 158 0 13 chr17 86508787 86509091 -2995462 + AluJo SINE Alu 1 300 -12 2282 112 3 0 chr17 86509380 86509676 -2994877 - AluSx SINE Alu -15 297 1 274 298 36 0 chr17 86510194 86510278 -2994275 + L2 LINE L2 2288 2374 -940 274 87 0 22 chr17 86510283 86510329 -2994224 - L1MB5 LINE L1 -1 6173 6129 2654 40 0 0 chr17 86510334 86510630 -2993923 - AluY SINE Alu -15 296 1 1858 162 10 27 chr17 86510639 86510935 -2993618 - AluJo SINE Alu -21 291 1 586 187 89 8 chr17 86510942 86511065 -2993488 - FLAM_C SINE Alu 0 133 1 1943 123 10 50 chr17 86511095 86511228 -2993325 + AluSq SINE Alu 1 138 -175 2652 55 3 0 chr17 86511228 86511538 -2993015 + AluY SINE Alu 1 311 0 1943 123 10 50 chr17 86511538 86511704 -2992849 + AluSq SINE Alu 138 288 -25 357 24 0 0 chr17 86511707 86511749 -2992804 + (TAAAA)n Simple_repeat Simple_repeat 3 44 0 1944 134 7 26 chr17 86511756 86512063 -2992490 + AluSx SINE Alu 1 301 -11 1349 233 93 0 chr17 86512064 86512408 -2992145 - L1MB5 LINE L1 -54 6120 5745 1044 168 91 77 chr17 86512431 86512749 -2991804 - LTR8A LTR ERV1 0 727 316 2230 108 6 19 chr17 86512749 86513064 -2991489 + AluSq SINE Alu 1 311 -2 1044 168 91 77 chr17 86513064 86513272 -2991281 - LTR8A LTR ERV1 -411 316 112 630 153 0 62 chr17 86513275 86513419 -2991134 + FRAM SINE Alu 41 175 -1 473 216 79 94 chr17 86513513 86513841 -2990712 + LOR1-int LTR ERV1 1336 2140 -2740 2159 118 0 0 chr17 86513855 86514135 -2990418 - AluSx SINE Alu -32 280 1 2438 131 3 0 chr17 86514135 86514502 -2990051 - MER41B LTR ERV1 -267 368 1 1610 229 52 23 chr17 86514523 86514907 -2989646 + LOR1-int LTR ERV1 1845 2239 -4092 392 173 211 103 chr17 86514975 86515007 -2989546 + MER41B LTR ERV1 146 173 -462 2030 167 0 3 chr17 86515007 86515318 -2989235 + AluJb SINE Alu 3 312 0 392 173 211 103 chr17 86515318 86515470 -2989083 + MER41B LTR ERV1 173 350 -285 * 617 294 101 21 chr17 86515448 86515734 -2988819 + MER66B LTR ERV1 169 477 -9 332 239 80 0 chr17 86515734 86515822 -2988731 + LOR1-int LTR ERV1 3095 3189 -4348 1239 175 79 81 chr17 86515825 86516344 -2988209 + LTR36 LTR ERV1 6 599 -12 257 329 0 24 chr17 86516361 86516443 -2988110 + LOR1-int LTR ERV1 2345 2424 -3907 727 221 14 86 chr17 86516713 86516935 -2987618 + LOR1-int LTR ERV1 3202 3407 -4130 180 0 0 0 chr17 86516962 86516982 -2987571 + (TCTCCC)n Simple_repeat Simple_repeat 2 21 0 1093 43 0 37 chr17 86516982 86517145 -2987408 + SVA Other Other 1 157 -1229 1000 149 37 146 chr17 86517145 86517617 -2986936 + LOR1-int LTR ERV1 1242 3050 -2896 569 240 0 0 chr17 86517619 86517740 -2986813 - AluSg/x SINE Alu -12 298 178 655 141 33 0 chr17 86517760 86517881 -2986672 + LOR1-int LTR ERV1 3424 3548 -2783 290 105 0 35 chr17 86517881 86517938 -2986615 + Alu SINE Alu 247 301 0 1755 114 51 104 chr17 86517938 86518411 -2986142 + LOR1-int LTR ERV1 3550 4047 -2734 2169 131 0 10 chr17 86518411 86518717 -2985836 - AluSx SINE Alu -9 303 1 1755 114 51 104 chr17 86518717 86518887 -2985666 + LOR1-int LTR ERV1 4047 4590 -2191 * 3823 114 22 97 chr17 86518882 86519452 -2985101 + LOR1-int LTR ERV1 4845 5456 -875 1391 229 50 0 chr17 86519452 86519572 -2984981 + AluJo SINE Alu 1 114 -198 180 0 0 0 chr17 86519572 86519592 -2984961 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1391 229 50 0 chr17 86519592 86519751 -2984802 + AluJo SINE Alu 114 294 -18 1925 168 0 0 chr17 86519751 86520036 -2984517 + AluSx SINE Alu 1 285 -27 3823 114 22 97 chr17 86520036 86520270 -2984283 + LOR1-int LTR ERV1 5454 5590 -741 405 213 12 0 chr17 86520271 86520351 -2984202 + FLAM SINE Alu 44 124 -19 955 191 10 5 chr17 86520363 86520572 -2983981 + LTR49-int LTR ERV1 5581 5790 -541 5201 167 23 33 chr17 86520577 86521659 -2982894 - MER11C LTR ERVK 0 1071 1 642 154 26 0 chr17 86521679 86521796 -2982757 + MER49 LTR ERV1 181 300 -623 * 1602 171 40 159 chr17 86521772 86521958 -2982595 + MER4D LTR ERV1 61 267 -636 2490 64 0 7 chr17 86521958 86522256 -2982297 + AluY SINE Alu 1 296 -15 1602 171 40 159 chr17 86522256 86522730 -2981823 + MER4D LTR ERV1 267 796 -107 2292 115 3 0 chr17 86522730 86523035 -2981518 + AluSq SINE Alu 1 306 -7 1111 162 93 123 chr17 86523036 86523500 -2981053 - LTR7 LTR ERV1 0 450 1 1602 171 40 159 chr17 86523500 86523635 -2980918 + MER4D LTR ERV1 795 903 0 2480 178 31 9 chr17 86524064 86524563 -2979990 - MER41B LTR ERV1 -12 597 96 1502 138 51 99 chr17 86525486 86525537 -2979016 - MER1B DNA MER1_type -2375 337 285 1892 112 51 48 chr17 86525537 86525911 -2978642 - THE1C LTR MaLR 0 375 1 1502 138 51 99 chr17 86525911 86526213 -2978340 - MER1B DNA MER1_type -2427 285 1 434 164 0 0 chr17 86526692 86526759 -2977794 + AluJ/FLAM SINE Alu 6 72 -240 497 79 40 0 chr17 86526778 86526854 -2977699 + LTR64 LTR ERVK 480 558 0 247 164 49 16 chr17 86526854 86526909 -2977644 - Charlie5 DNA MER1_type -167 2445 2389 227 292 0 0 chr17 86526997 86527069 -2977484 + Charlie7 DNA MER1_type 122 193 -2419 1165 108 30 0 chr17 86527190 86527356 -2977197 - AluSg/x SINE Alu -14 296 126 181 250 94 0 chr17 86529932 86529996 -2974557 + MIR SINE MIR 78 147 -115 830 242 22 0 chr17 86531168 86531350 -2973203 + L1M4 LINE L1 2 187 -6355 3541 234 101 11 chr17 86531358 86532855 -2971698 + L1M4 LINE L1 751 2464 -4182 2069 106 42 0 chr17 86533267 86533550 -2971003 - AluSq SINE Alu -18 295 1 1492 201 136 10 chr17 86535633 86536037 -2968516 + MER31A LTR ERV1 8 462 -23 22 0 0 0 chr17 86539537 86539559 -2964994 + GC_rich Low_complexity Low_complexity 1 22 0 1757 155 27 17 chr17 86540355 86540651 -2963902 - AluJo SINE Alu -13 299 1 181 270 48 32 chr17 86540670 86540733 -2963820 + L2 LINE L2 3002 3065 -248 303 326 11 0 chr17 86541616 86541708 -2962845 + MIR SINE MIR 54 146 -116 529 210 62 34 chr17 86541731 86541907 -2962646 - MER53 DNA DNA -8 181 1 1608 153 19 4 chr17 86543039 86543301 -2961252 - AluJb SINE Alu -46 266 1 254 345 118 15 chr17 86543332 86543535 -2961018 + MLT1J LTR MaLR 156 379 -132 233 295 29 64 chr17 86543747 86543920 -2960633 - LTR16B LTR ERVL -2 462 296 258 250 17 0 chr17 86543954 86544014 -2960539 - LTR16B LTR ERVL -236 228 168 2175 231 147 17 chr17 86544279 86544973 -2959580 - MER21B LTR ERV1 -58 805 22 380 333 90 75 chr17 86546109 86546442 -2958111 + L1ME1 LINE L1 5615 5952 -169 681 36 0 0 chr17 86546514 86546598 -2957955 + AluY SINE Alu 216 299 -12 2310 66 0 30 chr17 86547981 86548286 -2956267 - AluY SINE Alu -15 296 1 1957 83 9 124 chr17 86548290 86548629 -2955924 - AluSq SINE Alu -2 301 2 515 278 184 29 chr17 86548684 86549326 -2955227 + L2 LINE L2 2420 3154 -159 994 154 0 0 chr17 86549332 86549535 -2955018 - AluJb SINE Alu 0 337 135 235 325 0 41 chr17 86549537 86549660 -2954893 + L2 LINE L2 3146 3263 -50 203 353 129 0 chr17 86550958 86551043 -2953510 - MIR SINE MIR -77 185 90 651 265 30 0 chr17 86552220 86552420 -2952133 + L1MD3 LINE L1 7672 7877 -118 390 292 14 42 chr17 86552431 86552575 -2951978 + L1ME1 LINE L1 5975 6114 -52 1847 104 65 18 chr17 86552575 86552853 -2951700 - AluSc SINE Alu -18 291 1 1940 125 10 10 chr17 86552868 86553156 -2951397 - AluSx SINE Alu -24 288 1 2051 100 7 0 chr17 86555947 86556255 -2948298 - AluSx SINE Alu 0 310 1 2526 51 0 6 chr17 86556728 86557040 -2947513 - AluY SINE Alu -1 310 1 1222 155 111 64 chr17 86557043 86557340 -2947213 - AluJo SINE Alu -1 311 1 235 363 0 44 chr17 86557641 86557754 -2946799 - MIR SINE MIR -128 134 27 389 169 12 0 chr17 86558216 86558299 -2946254 + GA-rich Low_complexity Low_complexity 1 84 0 261 200 0 0 chr17 86558555 86558605 -2945948 + L2 LINE L2 3212 3261 -52 1212 99 0 0 chr17 86558885 86559047 -2945506 - AluSp SINE Alu -15 298 137 304 279 48 10 chr17 86559857 86559961 -2944592 - MER5B DNA MER1_type -8 170 63 303 291 29 0 chr17 86560012 86560115 -2944438 + MER5A DNA MER1_type 10 115 -74 2297 97 0 7 chr17 86560230 86560539 -2944014 - AluSx SINE Alu -5 307 1 493 198 0 0 chr17 86560592 86560688 -2943865 + MER81 DNA DNA 2 97 -17 * 703 235 22 11 chr17 86560683 86560866 -2943687 + MER20 DNA MER1_type 33 217 -2 207 0 0 0 chr17 86562061 86562084 -2942469 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 289 284 0 0 chr17 86562139 86562220 -2942333 - MER20 DNA MER1_type -39 180 100 3161 138 84 2 chr17 86562471 86562958 -2941595 + MER1A DNA MER1_type 1 527 0 2223 118 0 3 chr17 86562988 86563301 -2941252 + AluSx SINE Alu 1 312 0 491 186 62 23 chr17 86564445 86564574 -2939979 + Charlie8 DNA MER1_type 51 184 -2233 2348 103 0 0 chr17 86564675 86564985 -2939568 - AluSg SINE Alu 0 310 1 1882 101 0 0 chr17 86565013 86565284 -2939269 - AluSc SINE Alu 0 309 38 206 200 0 0 chr17 86567191 86567226 -2937327 - L2 LINE L2 -17 3255 3221 311 181 105 105 chr17 86567251 86567348 -2937205 - MIR SINE MIR -17 245 135 2181 113 63 33 chr17 86567348 86567712 -2936841 + THE1C LTR MaLR 1 375 0 311 181 105 105 chr17 86567712 86567750 -2936803 - MIR SINE MIR -127 135 99 206 342 25 0 chr17 86567846 86567925 -2936628 - L2 LINE L2 -1 3312 3232 307 257 0 0 chr17 86569104 86569174 -2935379 + MLT1C LTR MaLR 348 417 -50 1968 118 20 0 chr17 86569188 86569485 -2935068 + AluSx SINE Alu 1 303 -9 351 345 20 14 chr17 86570016 86570164 -2934389 - L1ME4a LINE L1 -23 6098 5950 2182 117 7 0 chr17 86571594 86571903 -2932650 - AluSx SINE Alu -1 311 1 232 250 17 0 chr17 86572038 86572098 -2932455 + CT-rich Low_complexity Low_complexity 5 65 0 1995 121 7 3 chr17 86573168 86573465 -2931088 - AluJo SINE Alu -12 300 3 1288 317 60 64 chr17 86574701 86575386 -2929167 + L1MC4 LINE L1 6150 6836 -1206 2308 89 3 10 chr17 86575386 86575700 -2928853 + AluSx SINE Alu 1 312 0 1288 317 60 64 chr17 86575700 86576722 -2927831 + L1MC4 LINE L1 6836 7841 -201 1583 145 45 31 chr17 86576891 86577180 -2927373 + AluJo SINE Alu 7 299 -13 263 286 100 36 chr17 86577824 86577964 -2926589 - L2 LINE L2 -210 3062 2914 252 314 0 0 chr17 86578371 86578511 -2926042 + (TGGG)n Simple_repeat Simple_repeat 3 142 0 349 360 15 0 chr17 86580145 86580281 -2924272 - MIR SINE MIR -2 260 123 496 216 102 28 chr17 86580317 86580493 -2924060 + MLT1D LTR MaLR 1 189 -316 771 160 0 0 chr17 86580845 86580976 -2923577 + MER41D LTR ERV1 1 131 -426 25 51 0 0 chr17 86581108 86581147 -2923406 + AT_rich Low_complexity Low_complexity 1 39 0 1792 174 0 0 chr17 86581173 86581455 -2923098 + AluJb SINE Alu 1 282 -30 288 53 0 0 chr17 86581458 86581496 -2923057 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 536 82 0 0 chr17 86581585 86581658 -2922895 + Alu SINE Alu 224 296 -13 1655 180 4 0 chr17 86582396 86582663 -2921890 - AluJo SINE Alu -22 290 23 313 322 107 4 chr17 86582833 86582992 -2921561 - L1MD1 LINE L1 -299 5865 5704 2135 134 0 0 chr17 86583190 86583496 -2921057 + AluSx SINE Alu 1 306 -6 568 209 72 13 chr17 86584237 86584390 -2920163 + MLT1B LTR MaLR 14 175 -215 1160 145 0 6 chr17 86584392 86584571 -2919982 + AluJo SINE Alu 1 178 -134 180 0 0 0 chr17 86584585 86584605 -2919948 + (A)n Simple_repeat Simple_repeat 1 20 0 1270 213 110 60 chr17 86584723 86585140 -2919413 + L1MC4 LINE L1 6647 7084 -958 2248 216 74 37 chr17 86585194 86585790 -2918763 + L1M4 LINE L1 3805 4430 -1716 2161 128 0 3 chr17 86585790 86586087 -2918466 + AluSx SINE Alu 1 296 -16 2248 216 74 37 chr17 86586087 86586167 -2918386 + L1M4 LINE L1 4430 4506 -1640 1268 291 119 0 chr17 86586237 86586650 -2917903 + L1MC4 LINE L1 7276 7737 -305 2416 91 0 0 chr17 86586687 86586984 -2917569 - AluSx SINE Alu -15 297 1 295 240 52 21 chr17 86586991 86587087 -2917466 + Charlie7 DNA MER1_type 354 452 -2160 2062 103 4 0 chr17 86587119 86587382 -2917171 + AluSg SINE Alu 14 277 -33 324 0 0 0 chr17 86587382 86587418 -2917135 + (CA)n Simple_repeat Simple_repeat 1 36 0 2408 87 7 3 chr17 86587422 86587732 -2916821 + AluY SINE Alu 1 311 0 717 127 14 28 chr17 86587891 86588056 -2916497 + AluJb SINE Alu 144 306 0 257 230 0 27 chr17 86588066 86588140 -2916413 - LTR37B LTR ERV1 -194 274 203 1439 106 106 66 chr17 86588227 86588500 -2916053 + AluJb SINE Alu 2 285 -27 222 118 0 0 chr17 86589070 86589104 -2915449 + (CACG)n Simple_repeat Simple_repeat 3 36 0 420 279 34 0 chr17 86589138 86589285 -2915268 + (CGG)n Simple_repeat Simple_repeat 1 152 0 26 30 0 0 chr17 86589488 86589521 -2915032 + GC_rich Low_complexity Low_complexity 1 33 0 183 156 0 0 chr17 86589627 86589659 -2914894 + C-rich Low_complexity Low_complexity 6 37 0 382 290 243 27 chr17 86589753 86590665 -2913888 - L2 LINE L2 -2 3311 2192 1845 174 10 3 chr17 86590684 86590994 -2913559 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 86591595 86591616 -2912937 + AT_rich Low_complexity Low_complexity 1 21 0 258 236 101 0 chr17 86591891 86591980 -2912573 - L2 LINE L2 -25 3247 3150 2257 111 0 3 chr17 86592282 86592580 -2911973 - AluSx SINE Alu -15 297 1 2270 168 142 22 chr17 86592648 86593141 -2911412 - MER21A LTR ERV1 -2 929 378 1673 159 76 11 chr17 86593237 86593513 -2911040 - AluJo SINE Alu -18 294 1 1436 208 14 14 chr17 86593519 86593807 -2910746 - AluJo SINE Alu -19 293 6 988 138 105 33 chr17 86593808 86594018 -2910535 - MER21A LTR ERV1 -706 225 1 1917 114 11 4 chr17 86595223 86595487 -2909066 + AluSx SINE Alu 44 309 -3 2254 108 0 14 chr17 86595510 86595805 -2908748 + AluSx SINE Alu 1 291 -21 1208 281 23 13 chr17 86595828 86596216 -2908337 + L1ME1 LINE L1 4744 5135 -1011 959 186 0 0 chr17 86596221 86596377 -2908176 + AluJb SINE Alu 140 295 -17 772 252 64 12 chr17 86596398 86596648 -2907905 + L1ME1 LINE L1 5839 6101 -65 2099 139 13 7 chr17 86596657 86596967 -2907586 + AluSx SINE Alu 1 312 0 840 176 96 25 chr17 86597253 86597452 -2907101 + MLT2B2 LTR ERVL 1 213 -302 708 193 84 30 chr17 86597483 86597649 -2906904 + MLT2B1 LTR ERVL 301 481 -39 369 0 0 0 chr17 86597649 86597690 -2906863 + (TG)n Simple_repeat Simple_repeat 2 42 0 708 193 84 30 chr17 86597690 86597725 -2906828 + MLT2B1 LTR ERVL 481 513 -7 315 231 16 0 chr17 86597757 86597851 -2906702 + L1MC4a LINE L1 5721 5819 -302 203 263 22 44 chr17 86598506 86598643 -2905910 + (TG)n Simple_repeat Simple_repeat 2 135 0 * 262 167 0 123 chr17 86598628 86598832 -2905721 + (CGTG)n Simple_repeat Simple_repeat 2 180 0 466 273 9 0 chr17 86599312 86599422 -2905131 + MER58B DNA MER1_type 231 341 0 229 232 0 18 chr17 86599428 86599484 -2905069 + GA-rich Low_complexity Low_complexity 2 56 0 1772 152 0 0 chr17 86600172 86600442 -2904111 - AluJo SINE Alu -16 296 27 1958 117 0 0 chr17 86600442 86600699 -2903854 + AluSq SINE Alu 2 258 -55 2530 67 0 0 chr17 86600827 86601125 -2903428 - AluY SINE Alu -13 298 1 320 289 0 0 chr17 86601162 86601238 -2903315 - L1M4 LINE L1 -1443 4703 4628 * 326 288 6 90 chr17 86601237 86601248 -2903305 + L1MC4a LINE L1 5817 5827 -1981 1738 165 44 24 chr17 86601248 86601545 -2903008 - AluJo SINE Alu -9 303 1 326 288 6 90 chr17 86601545 86601710 -2902843 + L1MC4a LINE L1 5827 5978 -1830 1522 159 48 79 chr17 86601731 86601876 -2902677 + AluJo SINE Alu 1 149 -163 270 0 0 0 chr17 86601876 86601906 -2902647 + (TA)n Simple_repeat Simple_repeat 2 31 0 1522 159 48 79 chr17 86601906 86602075 -2902478 + AluJo SINE Alu 149 305 -7 492 325 89 39 chr17 86602173 86602588 -2901965 - L1M4 LINE L1 -1470 4676 4241 553 307 129 63 chr17 86602596 86602883 -2901670 - L1M4 LINE L1 -1944 4202 3882 2342 115 0 3 chr17 86602883 86603196 -2901357 - AluSx SINE Alu 0 312 1 553 307 129 63 chr17 86603196 86603289 -2901264 - L1M4 LINE L1 -2264 3882 3797 1908 113 4 4 chr17 86604035 86604301 -2900252 + AluSg SINE Alu 39 304 -6 887 119 0 0 chr17 86604327 86604445 -2900108 - AluSc SINE Alu -16 293 176 524 153 31 0 chr17 86604586 86604684 -2899869 - AluJ/FLAM SINE Alu -210 102 2 243 235 37 12 chr17 86604696 86604777 -2899776 + HAL1b LINE L1 928 1010 -338 26 30 0 0 chr17 86604811 86604844 -2899709 + AT_rich Low_complexity Low_complexity 1 33 0 2260 103 3 3 chr17 86604844 86605136 -2899417 + AluSg SINE Alu 1 292 -18 289 167 0 0 chr17 86605143 86605191 -2899362 + MER66A LTR ERV1 292 339 -139 27 0 0 0 chr17 86605191 86605218 -2899335 + AT_rich Low_complexity Low_complexity 1 27 0 243 0 0 0 chr17 86605415 86605442 -2899111 + (TG)n Simple_repeat Simple_repeat 1 27 0 247 184 0 20 chr17 86605445 86605494 -2899059 + GA-rich Low_complexity Low_complexity 5 52 0 2191 120 10 0 chr17 86605563 86605871 -2898682 + AluSx SINE Alu 1 311 -1 410 213 21 0 chr17 86606004 86606098 -2898455 - MER94 DNA DNA -14 120 25 216 0 0 0 chr17 86607226 86607250 -2897303 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1099 157 6 0 chr17 86607259 86607425 -2897128 + FRAM SINE Alu 1 167 -9 568 157 9 9 chr17 86607436 86607551 -2897002 + GA-rich Low_complexity Low_complexity 4 118 0 458 191 0 0 chr17 86607553 86607637 -2896916 + C-rich Low_complexity Low_complexity 1 84 0 372 218 40 6 chr17 86607647 86607821 -2896732 + (CCGCG)n Simple_repeat Simple_repeat 1 180 0 294 171 79 21 chr17 86607769 86607909 -2896644 + (CCCGG)n Simple_repeat Simple_repeat 4 151 0 * 184 275 225 0 chr17 86608035 86608115 -2896438 + MIR SINE MIR 89 186 -76 1971 172 75 29 chr17 86611154 86611636 -2892917 + MLT1D LTR MaLR 1 504 -1 2044 102 46 11 chr17 86612454 86612738 -2891815 + AluSg SINE Alu 1 294 -16 215 95 71 24 chr17 86613226 86613268 -2891285 + A-rich Low_complexity Low_complexity 2 45 0 2316 110 7 0 chr17 86615528 86615837 -2888716 + AluSx SINE Alu 1 311 -1 753 244 44 0 chr17 86616132 86616337 -2888216 + MER58B DNA MER1_type 113 326 -15 1899 143 44 14 chr17 86616995 86617359 -2887194 + THE1C LTR MaLR 1 375 0 2044 79 53 4 chr17 86619235 86619501 -2885052 + AluSg SINE Alu 9 287 -23 215 59 0 29 chr17 86619506 86619540 -2885013 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 270 218 27 73 chr17 86619651 86619712 -2884841 + L1ME4a LINE L1 6011 6066 -55 2436 85 0 3 chr17 86619712 86620007 -2884546 - AluSx SINE Alu -18 294 1 270 218 27 73 chr17 86620007 86620055 -2884498 + L1ME4a LINE L1 6066 6115 -6 1976 129 11 18 chr17 86620836 86621148 -2883405 - AluSx SINE Alu 0 311 2 1210 204 26 0 chr17 86621189 86621454 -2883099 - L1MA4 LINE L1 -6 6294 6023 292 338 73 7 chr17 86621558 86621694 -2882859 - MIR SINE MIR -31 231 87 454 160 0 0 chr17 86621874 86621949 -2882604 - AluSc SINE Alu -56 253 179 1771 143 114 0 chr17 86622026 86622306 -2882247 - AluJb SINE Alu 0 312 1 2075 105 20 31 chr17 86622314 86622608 -2881945 - AluSx SINE Alu -19 293 3 1407 151 0 14 chr17 86623099 86623317 -2881236 + AluSg/x SINE Alu 87 301 -11 3064 229 48 32 chr17 86623328 86623889 -2880664 + L1ME1 LINE L1 4504 5054 -1112 2610 64 0 6 chr17 86623889 86624202 -2880351 - AluY SINE Alu 0 311 1 3064 229 48 32 chr17 86624202 86624710 -2879843 + L1ME1 LINE L1 5054 5580 -586 2145 112 14 7 chr17 86624710 86625006 -2879547 - AluSx SINE Alu -13 299 2 3064 229 48 32 chr17 86625006 86625032 -2879521 + L1ME1 LINE L1 5580 5604 -562 937 165 41 6 chr17 86625044 86625214 -2879339 - Tigger1 DNA MER2_type -7 2411 2236 1167 103 0 0 chr17 86625214 86625359 -2879194 + AluSq SINE Alu 1 145 -167 1235 140 17 0 chr17 86625538 86625717 -2878836 + AluSq SINE Alu 121 302 -11 388 123 0 4 chr17 86625728 86625778 -2878775 + Alu SINE Alu 1 29 -270 1959 142 0 7 chr17 86625778 86626059 -2878494 + AluSx SINE Alu 11 289 -23 388 123 0 4 chr17 86626059 86626081 -2878472 + Alu SINE Alu 29 50 -249 * 1721 141 14 21 chr17 86626066 86626356 -2878197 - Tigger1 DNA MER2_type -803 1615 1328 676 150 31 24 chr17 86626360 86626487 -2878066 - FLAM_C SINE Alu -1 132 5 2045 75 94 0 chr17 86626497 86626764 -2877789 - AluY SINE Alu -19 292 1 3626 171 30 31 chr17 86626768 86627007 -2877546 - Tigger1 DNA MER2_type -1712 706 468 1973 120 62 0 chr17 86627007 86627299 -2877254 + AluSx SINE Alu 1 310 -2 3626 171 30 31 chr17 86627299 86627711 -2876842 - Tigger1 DNA MER2_type -1950 468 53 2067 88 4 4 chr17 86627711 86628008 -2876545 + AluY SINE Alu 22 318 0 3626 171 30 31 chr17 86628008 86628061 -2876492 - Tigger1 DNA MER2_type -2365 53 1 1552 212 32 0 chr17 86628061 86628400 -2876153 + L1ME1 LINE L1 5640 5989 -177 1356 190 60 68 chr17 86628774 86628857 -2875696 - MER47A DNA MER2_type -1957 366 284 2244 92 3 16 chr17 86628857 86629161 -2875392 + AluSq SINE Alu 6 305 -8 1356 190 60 68 chr17 86629161 86629446 -2875107 - MER47A DNA MER2_type -2039 284 1 1128 99 6 47 chr17 86630204 86630376 -2874177 - AluJb SINE Alu -16 296 132 1814 169 0 20 chr17 86630381 86630677 -2873876 - AluJo SINE Alu -22 290 1 276 130 0 0 chr17 86631164 86631210 -2873343 + (TC)n Simple_repeat Simple_repeat 1 46 0 2254 108 0 19 chr17 86631210 86631526 -2873027 - AluY SINE Alu -1 310 1 2355 97 3 0 chr17 86632657 86632966 -2871587 + AluSx SINE Alu 1 310 -2 242 292 39 62 chr17 86633408 86633538 -2871015 + L1MC/D LINE L1 5790 5916 -1892 2146 115 24 0 chr17 86634219 86634514 -2870039 - AluSg1 SINE Alu -7 302 1 248 269 0 0 chr17 86634694 86634761 -2869792 - L2 LINE L2 -2 3270 3204 423 169 8 39 chr17 86635738 86635868 -2868685 + GA-rich Low_complexity Low_complexity 2 127 0 2438 131 3 0 chr17 86635992 86636359 -2868194 + MER41B LTR ERV1 1 368 -267 1714 164 0 38 chr17 86636359 86636652 -2867901 + AluJo SINE Alu 1 282 -30 2317 38 3 0 chr17 86636653 86636943 -2867610 + L1PA4 LINE L1 5863 6153 -2 1046 150 0 6 chr17 86637127 86637287 -2867266 - FRAM SINE Alu -18 158 1 189 0 0 0 chr17 86637372 86637393 -2867160 + (TTAGGG)n Simple_repeat Simple_repeat 1 21 0 2343 106 0 0 chr17 86637883 86638186 -2866367 - AluSx SINE Alu -9 303 1 274 346 82 5 chr17 86638192 86638400 -2866153 - L1M4 LINE L1 -1013 5133 4910 408 164 0 0 chr17 86638546 86638619 -2865934 - AluJb SINE Alu -17 295 223 303 303 0 0 chr17 86638649 86638725 -2865828 - L1M4 LINE L1 -1443 4703 4628 1359 133 0 73 chr17 86638755 86638989 -2865564 - AluJb SINE Alu -95 217 1 384 257 28 0 chr17 86639029 86639138 -2865415 - MER81 DNA DNA 0 114 3 2404 92 0 0 chr17 86639390 86639685 -2864868 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr17 86639742 86639763 -2864790 + AT_rich Low_complexity Low_complexity 1 21 0 2610 54 0 0 chr17 86641357 86641655 -2862898 - AluY SINE Alu -13 298 1 913 111 0 15 chr17 86641862 86641997 -2862556 + FLAM_C SINE Alu 1 133 0 195 162 0 0 chr17 86642556 86642593 -2861960 + G-rich Low_complexity Low_complexity 1 37 0 380 241 12 24 chr17 86642716 86642882 -2861671 + G-rich Low_complexity Low_complexity 1 164 0 276 85 0 43 chr17 86642882 86642955 -2861598 + Alu SINE Alu 247 300 0 289 228 58 117 chr17 86643003 86643174 -2861379 + MER5B DNA MER1_type 3 163 -15 472 336 85 52 chr17 86643220 86643702 -2860851 - HAL1 LINE L1 -1040 1467 970 3273 68 14 2 chr17 86643945 86644383 -2860170 + MLT2A1 LTR ERVL 2 444 0 2898 16 0 0 chr17 86644865 86645174 -2859379 - AluYa5 SINE Alu -2 309 1 2316 100 0 0 chr17 86645780 86646079 -2858474 + AluSx SINE Alu 3 301 -11 513 214 87 69 chr17 86647070 86647093 -2857460 + MER20 DNA MER1_type 40 61 -158 2275 89 3 48 chr17 86647093 86647409 -2857144 - AluSq SINE Alu -11 302 1 513 214 87 69 chr17 86647409 86647558 -2856995 + MER20 DNA MER1_type 61 215 -4 2111 71 46 7 chr17 86648251 86648533 -2856020 - AluSx SINE Alu -19 293 1 255 255 137 0 chr17 86648851 86648953 -2855600 + MIR SINE MIR 91 206 -56 239 111 0 111 chr17 86649322 86649376 -2855177 + MER65A LTR ERV1 1 48 -397 2325 97 10 3 chr17 86649376 86649684 -2854869 + AluSx SINE Alu 1 310 -2 932 81 0 0 chr17 86649706 86649817 -2854736 + AluSq/x SINE Alu 1 111 -201 2120 128 0 0 chr17 86650145 86650434 -2854119 - AluSx SINE Alu -23 289 1 1012 120 0 25 chr17 86651155 86651313 -2853240 + AluSc SINE Alu 35 188 -121 1090 155 0 0 chr17 86652148 86652303 -2852250 - AluSx SINE Alu -157 155 1 2394 91 3 7 chr17 86652534 86652843 -2851710 - AluSc SINE Alu -1 308 1 2171 120 3 0 chr17 86652845 86653136 -2851417 - AluSx SINE Alu -17 295 4 432 0 0 0 chr17 86653667 86653715 -2850838 + (TA)n Simple_repeat Simple_repeat 2 49 0 228 376 6 12 chr17 86654456 86654626 -2849927 + G-rich Low_complexity Low_complexity 3 171 0 21 0 0 0 chr17 86654713 86654734 -2849819 + GC_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr17 86654772 86654829 -2849724 + GC_rich Low_complexity Low_complexity 1 57 0 187 138 52 0 chr17 86655443 86655501 -2849052 + G-rich Low_complexity Low_complexity 5 65 0 201 121 0 0 chr17 86655536 86655569 -2848984 + (CGG)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr17 86655619 86655649 -2848904 + GC_rich Low_complexity Low_complexity 1 30 0 37 76 0 0 chr17 86655695 86655774 -2848779 + GC_rich Low_complexity Low_complexity 1 79 0 245 164 0 18 chr17 86656156 86656211 -2848342 + GA-rich Low_complexity Low_complexity 3 56 0 2272 97 7 7 chr17 86656903 86657212 -2847341 + AluSx SINE Alu 1 309 -3 548 274 49 6 chr17 86657279 86657443 -2847110 - MIR SINE MIR -60 202 32 1528 196 58 0 chr17 86657743 86658019 -2846534 + AluJb SINE Alu 1 292 -20 2048 97 0 103 chr17 86658177 86658517 -2846036 + AluY SINE Alu 1 305 -6 1274 175 5 0 chr17 86660015 86660226 -2844327 + AluJo SINE Alu 87 298 -14 341 220 15 2 chr17 86660752 86660885 -2843668 - MER58B DNA MER1_type -10 331 168 362 290 30 0 chr17 86660897 86660997 -2843556 - MER5B DNA MER1_type -70 108 6 269 291 15 30 chr17 86661714 86661848 -2842705 - L1M4 LINE L1 -3316 2830 2699 1703 123 86 48 chr17 86661852 86662144 -2842409 - AluSx SINE Alu -9 303 1 2414 98 3 16 chr17 86662895 86663211 -2841342 - AluSx SINE Alu 0 312 1 2366 90 7 3 chr17 86663645 86663955 -2840598 - AluY SINE Alu 0 311 1 1679 196 0 0 chr17 86664007 86664283 -2840270 - AluJb SINE Alu -36 276 1 406 184 19 48 chr17 86664286 86664389 -2840164 - AluJb SINE Alu 0 312 213 23 33 0 0 chr17 86664412 86664442 -2840111 + AT_rich Low_complexity Low_complexity 1 30 0 808 182 30 48 chr17 86664474 86664639 -2839914 - AluJo SINE Alu -139 173 12 276 240 107 0 chr17 86664866 86664941 -2839612 + MER5A DNA MER1_type 27 109 -80 2285 101 7 3 chr17 86666276 86666574 -2837979 - AluSq SINE Alu -10 303 5 222 62 0 0 chr17 86666674 86666706 -2837847 + (T)n Simple_repeat Simple_repeat 1 32 0 487 241 105 89 chr17 86666907 86667289 -2837264 + L1MEc LINE L1 1903 2290 -4106 * 804 216 123 3 chr17 86667278 86667588 -2836965 + L1MEc LINE L1 3145 3491 -2724 3186 191 103 21 chr17 86667630 86667670 -2836883 + L1MEc LINE L1 3612 3647 -2568 1724 155 4 4 chr17 86667670 86667935 -2836618 - AluSg SINE Alu -15 295 31 3186 191 103 21 chr17 86667935 86668812 -2835741 + L1MEc LINE L1 3647 4605 -1610 2043 149 33 14 chr17 86668839 86669202 -2835351 + THE1C LTR MaLR 6 375 0 2837 153 78 34 chr17 86669211 86669852 -2834701 + L1MB7 LINE L1 5495 6163 -21 1195 220 66 37 chr17 86669948 86670325 -2834228 + L1ME1 LINE L1 2172 2559 -3587 * 2683 229 55 29 chr17 86670323 86671130 -2833423 + L1ME1 LINE L1 4072 4899 -1247 369 0 0 0 chr17 86671140 86671181 -2833372 + (TG)n Simple_repeat Simple_repeat 2 42 0 1314 193 24 38 chr17 86671181 86671340 -2833213 - AluJo SINE Alu -16 286 131 2657 48 0 16 chr17 86671340 86671656 -2832897 - AluY SINE Alu 0 311 1 1314 193 24 38 chr17 86671656 86671786 -2832767 - AluJo SINE Alu -171 131 1 1675 259 97 16 chr17 86671802 86672377 -2832176 + MLT1E2 LTR MaLR 1 622 -4 2070 261 127 9 chr17 86672383 86672814 -2831739 + L1ME1 LINE L1 5281 5660 -506 1627 198 0 34 chr17 86672814 86673093 -2831460 + AluJo SINE Alu 1 269 -43 2417 95 0 0 chr17 86673093 86673397 -2831156 - AluSx SINE Alu -8 304 1 1627 198 0 34 chr17 86673397 86673440 -2831113 + AluJo SINE Alu 269 312 0 2070 261 127 9 chr17 86673440 86673787 -2830766 + L1ME1 LINE L1 5660 6151 -15 762 177 34 29 chr17 86674677 86674852 -2829701 - MER45A DNA AcHobo 0 178 3 2415 88 3 0 chr17 86675070 86675365 -2829188 - AluSp SINE Alu -17 296 1 1191 178 97 48 chr17 86675639 86675719 -2828834 + MLT1A1 LTR MaLR 3 78 -287 1964 126 0 90 chr17 86675719 86676053 -2828500 + AluSp SINE Alu 1 304 -9 1191 178 97 48 chr17 86676053 86676303 -2828250 + MLT1A1 LTR MaLR 78 349 -16 2336 107 0 0 chr17 86676898 86677196 -2827357 - AluSg SINE Alu -12 298 1 2234 107 0 7 chr17 86677196 86677487 -2827066 - AluSx SINE Alu -13 299 11 388 80 0 0 chr17 86677487 86677537 -2827016 - Alu SINE Alu -250 50 1 1235 140 17 0 chr17 86677548 86677727 -2826826 - AluSq SINE Alu -11 302 121 1249 69 0 0 chr17 86677906 86678051 -2826502 - AluSq SINE Alu -168 145 1 294 67 22 0 chr17 86678058 86678103 -2826450 + MADE1 DNA Mariner 35 80 0 * 2960 122 58 66 chr17 86678103 86678566 -2825987 + Tigger1 DNA MER2_type 1611 2069 -349 1998 132 0 24 chr17 86678566 86678862 -2825691 + AluSx SINE Alu 3 291 -21 2960 122 58 66 chr17 86678862 86679017 -2825536 + Tigger1 DNA MER2_type 2069 2224 -194 1302 169 48 0 chr17 86679017 86679224 -2825329 - AluSg/x SINE Alu -9 303 87 1355 177 15 2 chr17 86731800 86731878 -2772675 + Tigger7 DNA MER2_type 4 79 -654 2238 110 7 0 chr17 86731878 86732188 -2772365 + AluSx SINE Alu 1 312 0 1355 177 15 2 chr17 86732188 86732515 -2772038 + Tigger7 DNA MER2_type 79 485 -248 1014 126 28 33 chr17 86732506 86732540 -2772013 + Tigger7 DNA MER2_type 2374 2407 -180 * 1249 166 144 37 chr17 86732540 86732671 -2771882 - AluSg SINE Alu -10 300 184 2313 83 0 16 chr17 86732671 86732985 -2771568 - AluY SINE Alu 0 311 3 1249 166 144 37 chr17 86732985 86733124 -2771429 - AluSg SINE Alu -126 184 1 1014 126 28 33 chr17 86733124 86733303 -2771250 + Tigger7 DNA MER2_type 2407 2586 -1 2379 152 29 35 chr17 86733303 86733321 -2771232 - L1MB3 LINE L1 -25 6158 6141 2008 128 3 10 chr17 86733321 86733617 -2770936 - AluSx SINE Alu -18 294 1 2379 152 29 35 chr17 86733617 86733934 -2770619 - L1MB3 LINE L1 -42 6141 5825 2157 108 0 19 chr17 86733934 86734241 -2770312 + AluSg SINE Alu 1 301 -9 2379 152 29 35 chr17 86734241 86734417 -2770136 - L1MB3 LINE L1 -358 5825 5649 2291 92 0 0 chr17 86735092 86735396 -2769157 + AluSx SINE Alu 1 304 -8 5299 181 53 51 chr17 86735983 86736450 -2768103 - L1MB7 LINE L1 -30 6154 5689 2273 82 0 0 chr17 86736450 86736755 -2767798 - AluSx SINE Alu 0 305 1 5299 181 53 51 chr17 86736755 86737007 -2767546 - L1MB7 LINE L1 -495 5689 5439 2264 102 3 0 chr17 86737007 86737310 -2767243 - AluSx SINE Alu -8 304 1 5299 181 53 51 chr17 86737310 86737545 -2767008 - L1MB7 LINE L1 -745 5439 5206 2281 77 34 0 chr17 86737545 86737843 -2766710 - AluY SINE Alu -3 308 1 5299 181 53 51 chr17 86737843 86738109 -2766444 - L1MB7 LINE L1 -978 5206 4942 1920 126 0 43 chr17 86738109 86738411 -2766142 + AluSx SINE Alu 1 289 -23 5299 181 53 51 chr17 86738411 86739684 -2764869 - L1MB7 LINE L1 -1242 4942 3656 197 329 86 24 chr17 86739825 86740035 -2764518 - L2 LINE L2 -210 3062 2840 1393 231 71 16 chr17 86740039 86740476 -2764077 + MLT1C LTR MaLR 6 466 -1 329 284 173 0 chr17 86740800 86740927 -2763626 + MIR SINE MIR 110 258 -4 27 29 0 0 chr17 86740965 86740999 -2763554 + AT_rich Low_complexity Low_complexity 1 34 0 2273 87 0 16 chr17 86741033 86741342 -2763211 + AluSx SINE Alu 1 304 -8 232 321 90 22 chr17 86741350 86741705 -2762848 - L1ME4a LINE L1 -2 6119 5741 823 184 40 0 chr17 86741736 86741888 -2762665 - L1MA10 LINE L1 -1 6333 6176 3458 160 37 41 chr17 86741911 86742139 -2762414 + L1MB3 LINE L1 5077 5304 -879 2143 125 3 3 chr17 86742139 86742451 -2762102 + AluSx SINE Alu 1 312 0 3458 160 37 41 chr17 86742451 86743169 -2761384 + L1MB3 LINE L1 5304 6012 -171 2040 121 0 26 chr17 86743175 86743349 -2761204 - AluSx SINE Alu -7 305 141 2155 72 43 0 chr17 86743349 86743625 -2760928 - AluSq SINE Alu -15 298 11 2040 121 0 26 chr17 86743625 86743763 -2760790 - AluSx SINE Alu -171 141 1 1531 212 26 9 chr17 86743763 86744108 -2760445 - L1ME4a LINE L1 -438 5728 5378 * 2003 194 32 103 chr17 86744104 86744553 -2760000 - L1ME1 LINE L1 -264 5902 5568 1842 147 6 19 chr17 86744553 86744866 -2759687 - AluSx SINE Alu 0 312 4 2003 194 32 103 chr17 86744866 86745327 -2759226 - L1ME1 LINE L1 -598 5568 5076 3901 251 50 21 chr17 86745329 86746682 -2757871 - L1ME4a LINE L1 -850 5296 3904 494 291 46 53 chr17 86746675 86746825 -2757728 - L1ME LINE L1 -424 5697 5547 * 2335 70 7 7 chr17 86746825 86747126 -2757427 + AluSq SINE Alu 1 301 -12 494 291 46 53 chr17 86747126 86747411 -2757142 - L1ME LINE L1 -574 5547 5265 2596 168 54 46 chr17 86747480 86748094 -2756459 - L1MC1 LINE L1 0 6333 5715 455 281 169 45 chr17 86748724 86748789 -2755764 - MLT1H LTR MaLR 0 549 493 2010 156 0 0 chr17 86748789 86749097 -2755456 + AluJb SINE Alu 1 308 -4 455 281 169 45 chr17 86749097 86749477 -2755076 - MLT1H LTR MaLR -56 493 7 2244 107 7 0 chr17 86751274 86751583 -2752970 + AluSx SINE Alu 2 312 0 1013 228 43 24 chr17 86751723 86751977 -2752576 + MIR SINE MIR 4 262 0 309 309 0 0 chr17 86752149 86752233 -2752320 - MIR SINE MIR -105 157 74 2311 87 0 7 chr17 86757014 86757314 -2747239 - AluSx SINE Alu -14 298 1 2174 122 6 35 chr17 86758849 86759194 -2745359 + MER1B DNA MER1_type 3 337 0 180 0 0 0 chr17 86761762 86761782 -2742771 + (TGGGGG)n Simple_repeat Simple_repeat 3 22 0 268 368 65 0 chr17 86762904 86763059 -2741494 - MIR SINE MIR -82 180 16 216 200 0 0 chr17 86765331 86765381 -2739172 + (CGTG)n Simple_repeat Simple_repeat 1 50 0 280 255 255 17 chr17 86766276 86766621 -2737932 - MLT1H LTR MaLR -16 533 107 537 92 0 0 chr17 86768402 86768478 -2736075 + (CA)n Simple_repeat Simple_repeat 1 76 0 252 219 40 10 chr17 86768790 86768865 -2735688 + MIR SINE MIR 90 164 -63 183 42 0 0 chr17 86769574 86769598 -2734955 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 354 123 0 0 chr17 86775269 86775326 -2729227 + (GGGGA)n Simple_repeat Simple_repeat 3 59 0 181 191 43 43 chr17 86776470 86776517 -2728036 + MIR SINE MIR 77 123 -85 235 267 29 29 chr17 86776836 86776941 -2727612 + C-rich Low_complexity Low_complexity 1 105 0 499 248 45 0 chr17 86778122 86778285 -2726268 + MIR SINE MIR 48 219 -43 2194 114 0 7 chr17 86781272 86781579 -2722974 - AluSx SINE Alu -7 305 1 986 193 75 4 chr17 86781590 86781818 -2722735 - L1MB5 LINE L1 -8 6166 5923 2099 125 0 3 chr17 86781847 86782158 -2722395 + AluSx SINE Alu 1 310 -2 426 280 87 41 chr17 86782158 86782376 -2722177 + MIR SINE MIR 28 255 -7 198 242 194 0 chr17 86782557 86782619 -2721934 + MIR SINE MIR 114 187 -75 459 193 0 11 chr17 86783623 86783711 -2720842 - MIR SINE MIR -113 149 63 223 301 73 49 chr17 86785655 86785778 -2718775 - MIR3 SINE MIR -69 139 14 209 307 45 11 chr17 86785774 86785862 -2718691 + MIR SINE MIR 61 151 -57 * 453 180 0 0 chr17 86787413 86787502 -2717051 + (CA)n Simple_repeat Simple_repeat 2 90 0 1250 200 15 19 chr17 86788438 86788708 -2715845 + L1MB8 LINE L1 5907 6175 -3 190 301 66 47 chr17 86789508 86789764 -2714789 + L2 LINE L2 2817 3077 -236 477 76 0 0 chr17 86789997 86790063 -2714490 + (TGAA)n Simple_repeat Simple_repeat 1 66 0 497 284 25 6 chr17 86790839 86791010 -2713543 + MIR3 SINE MIR 39 171 -37 227 230 23 11 chr17 86791016 86791103 -2713450 + (GCATG)n Simple_repeat Simple_repeat 5 92 0 263 291 86 34 chr17 86792424 86792658 -2711895 + LTR16A LTR ERVL 203 448 -2 1133 243 73 36 chr17 86792795 86793206 -2711347 + MLT1C LTR MaLR 42 467 0 791 213 16 0 chr17 86793881 86794064 -2710489 + MER45B DNA AcHobo 412 597 -443 517 249 157 0 chr17 86794312 86794529 -2710024 + L1MC3 LINE L1 7181 7431 -354 2009 134 3 31 chr17 86794529 86794850 -2709703 + AluSx SINE Alu 1 312 0 990 204 117 0 chr17 86794850 86795124 -2709429 + L1MC3 LINE L1 7472 7777 -8 493 293 106 55 chr17 86795139 86795698 -2708855 + L1ME4a LINE L1 5312 5898 -223 3351 222 49 54 chr17 86795740 86795864 -2708689 + MER45B DNA AcHobo 1 124 -1457 1386 193 17 24 chr17 86795864 86796073 -2708480 + AluJb SINE Alu 5 214 -98 1891 70 0 23 chr17 86796073 86796364 -2708189 - AluY SINE Alu 0 313 29 1386 193 17 24 chr17 86796364 86796375 -2708178 + AluJb SINE Alu 214 224 -88 2083 131 0 28 chr17 86796375 86796696 -2707857 - AluSx SINE Alu 0 312 1 1386 193 17 24 chr17 86796696 86796763 -2707790 + AluJb SINE Alu 224 292 -20 3351 222 49 54 chr17 86796763 86797641 -2706912 + MER45B DNA AcHobo 124 998 -42 2316 100 3 0 chr17 86798010 86798321 -2706232 + AluSx SINE Alu 1 312 0 1700 113 0 0 chr17 86798354 86798585 -2705968 + AluSg1 SINE Alu 1 231 -78 1029 292 135 8 chr17 86798663 86799167 -2705386 + ERVL LTR ERVL 1571 2138 -2858 1366 198 128 30 chr17 86799258 86799587 -2704966 - MLT1A1 LTR MaLR -4 361 1 1839 181 32 98 chr17 86799587 86800119 -2704434 + MLT1D LTR MaLR 9 505 0 558 268 121 5 chr17 86800245 86800435 -2704118 - HERV16 LTR ERVL -3069 1927 1716 1356 296 43 11 chr17 86800446 86800886 -2703667 + ERVL LTR ERVL 2378 2831 -2165 2143 95 21 0 chr17 86800891 86801176 -2703377 + AluSx SINE Alu 1 291 -21 432 333 64 0 chr17 86801470 86801674 -2702879 + ERVL LTR ERVL 3249 3465 -2020 2137 106 19 13 chr17 86801681 86801992 -2702561 + AluSq SINE Alu 1 313 0 802 195 11 14 chr17 86802000 86802339 -2702214 + GA-rich Low_complexity Low_complexity 1 338 0 873 365 33 10 chr17 86802513 86803217 -2701336 + ERVL LTR ERVL 4563 5322 -358 1481 221 164 23 chr17 86803302 86803741 -2700812 + MLT1D LTR MaLR 5 505 0 601 272 25 42 chr17 86803936 86804107 -2700446 + LTR16A LTR ERVL 158 324 -126 1897 158 7 0 chr17 86804107 86804410 -2700143 - AluJb SINE Alu -7 305 1 601 272 25 42 chr17 86804410 86804521 -2700032 + LTR16A LTR ERVL 324 435 -15 545 325 122 39 chr17 86804539 86804923 -2699630 + L1MC4a LINE L1 4877 5292 -854 272 235 39 10 chr17 86804926 86805028 -2699525 + L1MC4a LINE L1 5297 5401 -2407 * 750 176 13 33 chr17 86805028 86805181 -2699372 - L1MB5 LINE L1 0 6174 6025 3138 172 36 12 chr17 86805181 86805851 -2698702 - L1MB5 LINE L1 -248 5926 5235 2044 159 47 19 chr17 86805851 86806216 -2698337 + THE1C LTR MaLR 1 375 0 3138 172 36 12 chr17 86806216 86806355 -2698198 - L1MB5 LINE L1 -939 5235 5101 587 311 82 48 chr17 86806359 86806519 -2698034 + L1MC4a LINE L1 5392 5545 -2263 1761 134 54 14 chr17 86806519 86806796 -2697757 - AluJb SINE Alu -24 288 1 587 311 82 48 chr17 86806796 86806820 -2697733 + L1MC4a LINE L1 5545 5567 -2241 2079 130 0 0 chr17 86806820 86807127 -2697426 - AluSx SINE Alu -5 307 1 587 311 82 48 chr17 86807127 86807503 -2697050 + L1MC4a LINE L1 5567 5972 -1836 443 221 46 30 chr17 86807577 86807708 -2696845 + MER45A DNA AcHobo 1 117 -61 3312 129 19 95 chr17 86807708 86807820 -2696733 - L1MB3 LINE L1 -16 6167 6048 2183 101 7 0 chr17 86807820 86808117 -2696436 - AluSq SINE Alu -14 299 1 3312 129 19 95 chr17 86808117 86808520 -2696033 - L1MB3 LINE L1 -135 6048 5616 1871 136 0 11 chr17 86808520 86808799 -2695754 + AluJb SINE Alu 26 301 -11 1814 141 18 3 chr17 86808809 86809093 -2695460 + AluSx SINE Alu 12 299 -13 3312 129 19 95 chr17 86809093 86809118 -2695435 - L1MB3 LINE L1 -576 5607 5582 1504 207 18 72 chr17 86809118 86809504 -2695049 - MLT1A1 LTR MaLR 0 365 1 3312 129 19 95 chr17 86809504 86809737 -2694816 - L1MB3 LINE L1 -601 5582 5443 1309 165 150 15 chr17 86809737 86810003 -2694550 - AluSg SINE Alu -8 302 1 3312 129 19 95 chr17 86810003 86810036 -2694517 - L1MB3 LINE L1 -740 5443 5409 247 157 39 0 chr17 86810036 86810087 -2694466 + MER45A DNA AcHobo 102 154 -24 340 227 7 7 chr17 86810751 86810892 -2693661 + (ATG)n Simple_repeat Simple_repeat 1 141 0 1389 77 0 0 chr17 86810950 86811234 -2693319 + (ATG)n Simple_repeat Simple_repeat 1 284 0 324 336 99 0 chr17 86811650 86811781 -2692772 - MIR SINE MIR -8 254 111 203 391 68 21 chr17 86812406 86812598 -2691955 - MIR3 SINE MIR -6 202 2 237 356 34 13 chr17 86813529 86813678 -2690875 + L2 LINE L2 2716 2867 -447 1704 239 73 32 chr17 86814430 86814891 -2689662 + L1MB5 LINE L1 5587 6077 -97 2252 87 6 3 chr17 86814891 86815202 -2689351 + AluSx SINE Alu 1 312 0 1704 239 73 32 chr17 86815202 86815305 -2689248 + L1MB5 LINE L1 6077 6174 0 364 351 7 0 chr17 86815305 86815459 -2689094 + (TAG)n Simple_repeat Simple_repeat 2 156 0 1835 218 40 28 chr17 86815602 86816074 -2688479 - MLT2B3 LTR ERVL 0 554 77 1717 167 0 52 chr17 86816665 86816994 -2687559 + AluJb SINE Alu 1 312 0 1372 262 95 64 chr17 86817116 86817819 -2686734 + L2 LINE L2 2180 2904 -410 863 251 44 110 chr17 86817836 86818363 -2686190 + L2 LINE L2 2815 3306 -7 2272 107 3 0 chr17 86818540 86818850 -2685703 - AluSx SINE Alu -1 311 1 3562 219 41 79 chr17 86818850 86819244 -2685309 + L1ME1 LINE L1 3912 4320 -1846 2005 106 53 0 chr17 86819244 86819526 -2685027 + AluSx SINE Alu 1 297 -15 3562 219 41 79 chr17 86819526 86819556 -2684997 + L1ME1 LINE L1 4320 4350 -1816 2446 77 0 0 chr17 86819556 86819867 -2684686 + AluY SINE Alu 1 311 0 3562 219 41 79 chr17 86819867 86820137 -2684416 + L1ME1 LINE L1 4350 4629 -1537 1493 152 34 71 chr17 86820137 86820434 -2684119 - AluJb SINE Alu -13 299 14 3562 219 41 79 chr17 86820434 86820695 -2683858 + L1ME1 LINE L1 4629 4899 -1267 2120 128 21 53 chr17 86820695 86821071 -2683482 - THE1B LTR MaLR 0 364 1 3562 219 41 79 chr17 86821071 86821346 -2683207 + L1ME1 LINE L1 4899 5183 -983 2097 162 100 0 chr17 86821346 86821735 -2682818 + MSTA LTR MaLR 1 428 0 3562 219 41 79 chr17 86821735 86821776 -2682777 + L1ME1 LINE L1 5183 5224 -942 180 77 0 0 chr17 86821776 86821802 -2682751 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 748 200 6 33 chr17 86821803 86821905 -2682648 + L1MB8 LINE L1 5998 6094 -84 2719 127 38 2 chr17 86821905 86822323 -2682230 - Tigger2a DNA MER2_type -1 433 1 748 200 6 33 chr17 86822323 86822400 -2682153 + L1MB8 LINE L1 6094 6172 -6 3562 219 41 79 chr17 86822400 86822624 -2681929 + L1ME1 LINE L1 5224 5455 -711 243 88 0 0 chr17 86822624 86822658 -2681895 + (TA)n Simple_repeat Simple_repeat 2 35 0 3562 219 41 79 chr17 86822658 86823489 -2681064 + L1ME1 LINE L1 5455 6156 -10 1773 81 147 8 chr17 86823490 86823749 -2680804 + AluSx SINE Alu 1 295 -7 2309 84 0 16 chr17 86823809 86824118 -2680435 + AluSc SINE Alu 1 304 -5 1527 171 7 58 chr17 86824487 86824638 -2679915 - AluJb SINE Alu -28 284 154 1876 138 13 33 chr17 86824638 86824943 -2679610 - AluSx SINE Alu -13 299 1 1527 171 7 58 chr17 86824943 86825083 -2679470 - AluJb SINE Alu -158 154 8 2304 103 3 0 chr17 86825210 86825521 -2679032 - AluSx SINE Alu 0 312 1 439 322 50 34 chr17 86825530 86825850 -2678703 - L1ME LINE L1 -466 5696 5372 397 339 29 6 chr17 86825884 86826036 -2678517 - L1ME LINE L1 -961 5398 5265 848 277 83 29 chr17 86827089 86827483 -2677070 + L1MDa LINE L1 3 543 -6000 3461 207 81 57 chr17 86827548 86827773 -2676780 + L1MDa LINE L1 794 1012 -5528 1940 129 0 7 chr17 86827773 86828088 -2676465 - AluJb SINE Alu 0 319 7 3461 207 81 57 chr17 86828088 86828624 -2675929 + L1MDa LINE L1 1012 1534 -5006 2291 85 3 0 chr17 86828624 86828930 -2675623 + AluSx SINE Alu 1 307 -5 3461 207 81 57 chr17 86828930 86829467 -2675086 + L1MDa LINE L1 1534 2057 -4483 2134 99 0 0 chr17 86829467 86829788 -2674765 + AluSx SINE Alu 1 321 0 3461 207 81 57 chr17 86829788 86829951 -2674602 + L1MDa LINE L1 2057 2215 -4325 1674 176 52 0 chr17 86829951 86830065 -2674488 + AluJb SINE Alu 5 112 -200 180 0 0 0 chr17 86830065 86830085 -2674468 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1674 176 52 0 chr17 86830085 86830259 -2674294 + AluJb SINE Alu 112 308 -4 3461 207 81 57 chr17 86830259 86830623 -2673930 + L1MDa LINE L1 2215 2647 -3893 3422 207 80 35 chr17 86830631 86830826 -2673727 + L1MD2 LINE L1 5342 5527 -832 2134 119 30 0 chr17 86830826 86831129 -2673424 + AluSx SINE Alu 1 312 0 3422 207 80 35 chr17 86831129 86831295 -2673258 + L1MD2 LINE L1 5527 5684 -675 1911 158 7 7 chr17 86831295 86831605 -2672948 + AluJo SINE Alu 1 310 -2 3422 207 80 35 chr17 86831605 86832215 -2672338 + L1MD2 LINE L1 5684 6358 -1 569 239 0 0 chr17 86832228 86832341 -2672212 + FLAM_C SINE Alu 30 142 -1 607 153 15 0 chr17 86832341 86832472 -2672081 + G-rich Low_complexity Low_complexity 1 133 0 1079 149 12 0 chr17 86832472 86832640 -2671913 + AluJb SINE Alu 133 302 -10 432 245 9 0 chr17 86833509 86833615 -2670938 - MER45A DNA AcHobo -12 166 60 286 258 0 0 chr17 86834646 86834708 -2669845 + G-rich Low_complexity Low_complexity 5 66 0 2090 114 7 13 chr17 86834922 86835228 -2669325 + AluSx SINE Alu 1 304 -8 480 222 189 0 chr17 86835999 86836152 -2668401 - MER53 DNA DNA -6 183 2 1886 147 6 10 chr17 86836199 86836540 -2668013 - AluJo SINE Alu 0 340 1 1975 136 0 10 chr17 86836614 86836916 -2667637 - AluSx SINE Alu -6 306 8 321 273 67 27 chr17 86837014 86837092 -2667461 + L1ME4a LINE L1 5962 6035 -86 974 82 11 33 chr17 86837092 86837274 -2667279 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 321 273 67 27 chr17 86837274 86837345 -2667208 + L1ME4a LINE L1 6035 6117 -4 1864 132 40 10 chr17 86837368 86837671 -2666882 + AluJb SINE Alu 1 312 0 954 118 0 0 chr17 86838129 86838265 -2666288 + AluSp SINE Alu 1 136 -177 2418 66 0 0 chr17 86838265 86838567 -2665986 + AluY SINE Alu 1 302 -9 492 254 15 23 chr17 86839575 86839705 -2664848 - MER63 DNA MER1_type -81 755 1 2200 115 3 0 chr17 86840104 86840409 -2664144 - AluSx SINE Alu -6 306 1 2197 84 0 59 chr17 86840682 86841005 -2663548 - AluSq SINE Alu -5 308 5 2158 118 3 0 chr17 86841037 86841343 -2663210 + AluSx SINE Alu 1 307 -5 261 274 0 0 chr17 86842134 86842240 -2662313 + (TG)n Simple_repeat Simple_repeat 1 106 0 1310 222 31 41 chr17 86843261 86843565 -2660988 - MLT1C LTR MaLR 0 467 167 2307 97 0 0 chr17 86843565 86843863 -2660690 + AluSx SINE Alu 1 298 -14 1310 222 31 41 chr17 86843863 86843977 -2660576 - MLT1C LTR MaLR -300 167 53 255 222 0 0 chr17 86844704 86844767 -2659786 + (CAGC)n Simple_repeat Simple_repeat 3 65 0 469 252 7 27 chr17 86845216 86845363 -2659190 + MER33 DNA MER1_type 6 149 -175 1210 111 0 0 chr17 86845369 86845541 -2659012 - AluSg/x SINE Alu -8 302 131 626 156 37 9 chr17 86845541 86845650 -2658903 + AluJo/FRAM SINE Alu 181 292 -20 1990 103 33 0 chr17 86846120 86846440 -2658113 - AluSx SINE Alu 0 330 2 945 102 16 0 chr17 86846459 86846586 -2657967 - FLAM_C SINE Alu -2 131 3 814 232 56 11 chr17 86846681 86847082 -2657471 + MLT2B1 LTR ERVL 1 506 -9 237 272 233 0 chr17 86847182 86847285 -2657268 + MIR SINE MIR 123 249 -13 2175 105 0 10 chr17 86847307 86847602 -2656951 + AluSq SINE Alu 5 296 -17 626 228 164 62 chr17 86847698 86848088 -2656465 - MLT1C LTR MaLR -33 434 5 331 235 78 26 chr17 86848166 86848281 -2656272 + MIR SINE MIR 100 220 -42 795 143 8 0 chr17 86848371 86848490 -2656063 + AluJb SINE Alu 3 122 -190 387 0 0 0 chr17 86848490 86848533 -2656020 + (CA)n Simple_repeat Simple_repeat 2 44 0 189 333 231 0 chr17 86848682 86848790 -2655763 + MIR3 SINE MIR 23 155 -53 605 338 56 9 chr17 86849639 86849855 -2654698 - MIR SINE MIR 0 262 37 359 323 74 9 chr17 86850092 86850309 -2654244 + L2 LINE L2 2723 2953 -361 2508 205 35 110 chr17 86850978 86851042 -2653511 + MER63C DNA MER1_type 9 76 -984 396 0 0 0 chr17 86851042 86851086 -2653467 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2508 205 35 110 chr17 86851086 86851102 -2653451 + MER63C DNA MER1_type 76 92 -968 2052 100 3 7 chr17 86851102 86851392 -2653161 + AluSx SINE Alu 1 289 -23 2508 205 35 110 chr17 86851392 86851464 -2653089 + MER63C DNA MER1_type 92 168 -892 2106 129 3 0 chr17 86851464 86851775 -2652778 + AluSp SINE Alu 1 312 -1 2508 205 35 110 chr17 86851775 86852082 -2652471 + MER63C DNA MER1_type 168 496 -564 1778 178 0 10 chr17 86852082 86852396 -2652157 + AluJo SINE Alu 1 311 -1 2508 205 35 110 chr17 86852396 86852444 -2652109 + MER63C DNA MER1_type 496 546 -514 2355 79 0 25 chr17 86852444 86852762 -2651791 - AluSq SINE Alu -3 310 1 2508 205 35 110 chr17 86852762 86853235 -2651318 + MER63C DNA MER1_type 546 919 -11 934 325 62 13 chr17 86853274 86853778 -2650775 - L2 LINE L2 -4 3309 2779 2159 112 3 31 chr17 86854286 86854607 -2649946 + AluSx SINE Alu 1 312 0 455 234 95 0 chr17 86854996 86855133 -2649420 + MER45A DNA AcHobo 1 150 -28 301 226 16 65 chr17 86857174 86857234 -2647319 + ORSL DNA AcHobo 33 85 -190 2037 112 16 20 chr17 86857234 86857538 -2647015 + AluSq SINE Alu 1 303 -10 301 226 16 65 chr17 86857538 86857601 -2646952 + ORSL DNA AcHobo 85 150 -125 2155 130 3 0 chr17 86857608 86857916 -2646637 + AluSx SINE Alu 1 309 -3 1656 157 62 3 chr17 86857916 86858254 -2646299 + L1MB3 LINE L1 5819 6176 -7 25 0 0 0 chr17 86860543 86860568 -2643985 + GC_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr17 86864270 86864308 -2640245 + GC_rich Low_complexity Low_complexity 1 38 0 349 224 8 32 chr17 86864500 86864625 -2639928 + C-rich Low_complexity Low_complexity 2 123 0 280 208 32 24 chr17 86864808 86864933 -2639620 + (CGG)n Simple_repeat Simple_repeat 2 127 0 208 237 11 32 chr17 86865025 86865118 -2639435 + (CGGGG)n Simple_repeat Simple_repeat 1 91 0 278 247 0 46 chr17 86865211 86865361 -2639192 + G-rich Low_complexity Low_complexity 1 204 0 327 105 0 0 chr17 86869714 86869771 -2634782 + (CCA)n Simple_repeat Simple_repeat 3 59 0 237 108 0 0 chr17 86870063 86870100 -2634453 + (CGG)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr17 86870918 86870938 -2633615 + (A)n Simple_repeat Simple_repeat 1 20 0 197 235 71 82 chr17 86872551 86872636 -2631917 - MIR SINE MIR -59 149 66 840 203 5 36 chr17 86873858 86874050 -2630503 + MER53 DNA DNA 3 188 -1 195 271 0 0 chr17 86874072 86874120 -2630433 - L2 LINE L2 -84 3188 3141 649 284 121 9 chr17 86875091 86875306 -2629247 - MIR SINE MIR -1 261 23 342 0 0 0 chr17 86875648 86875686 -2628867 + (TG)n Simple_repeat Simple_repeat 1 38 0 216 0 0 0 chr17 86875685 86875709 -2628844 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 2180 126 0 0 chr17 86876067 86876376 -2628177 - AluSq SINE Alu -2 311 3 183 238 63 48 chr17 86876544 86876607 -2627946 + MIR SINE MIR 199 262 0 272 180 0 33 chr17 86876682 86876743 -2627810 + MER4-int LTR ERV1 1102 1160 -5438 540 281 0 0 chr17 86876746 86876924 -2627629 + (TG)n Simple_repeat Simple_repeat 1 178 0 423 263 113 25 chr17 86877999 86878159 -2626394 + MIR3 SINE MIR 24 197 -11 295 263 42 11 chr17 86878566 86878661 -2625892 - MIR3 SINE MIR 0 208 111 248 333 36 0 chr17 86879489 86879600 -2624953 + (CAGAGA)n Simple_repeat Simple_repeat 5 119 0 2611 88 0 40 chr17 86879765 86879794 -2624759 + L1PA13 LINE L1 5801 5830 -333 1904 151 0 41 chr17 86879794 86879929 -2624624 + AluSx SINE Alu 1 140 -172 2498 52 3 0 chr17 86879929 86880239 -2624314 + AluY SINE Alu 1 311 0 1904 151 0 41 chr17 86880239 86880422 -2624131 + AluSx SINE Alu 140 306 -6 2611 88 0 40 chr17 86880422 86880659 -2623894 + L1PA13 LINE L1 5830 6050 -113 2378 67 0 0 chr17 86880659 86880957 -2623596 + AluY SINE Alu 1 298 -13 2611 88 0 40 chr17 86880957 86881065 -2623488 + L1PA13 LINE L1 6050 6161 -2 1251 277 83 39 chr17 86881077 86881588 -2622965 + L1MC4 LINE L1 7368 7855 -187 2013 81 51 4 chr17 86881588 86881861 -2622692 + AluSq SINE Alu 1 286 -27 375 41 0 0 chr17 86881861 86881910 -2622643 + (CA)n Simple_repeat Simple_repeat 2 50 0 1251 277 83 39 chr17 86881910 86882021 -2622532 + L1MC4 LINE L1 7854 8019 -23 212 170 96 85 chr17 86882397 86882491 -2622062 + MIR3 SINE MIR 4 98 -110 * 557 313 157 18 chr17 86882461 86882793 -2621760 + L2 LINE L2 2935 3312 -1 191 185 0 37 chr17 86882823 86882877 -2621676 + GA-rich Low_complexity Low_complexity 5 56 0 1940 125 11 0 chr17 86883242 86883546 -2621007 + AluSx SINE Alu 1 307 0 312 312 94 22 chr17 86884843 86884981 -2619572 + L2 LINE L2 3125 3272 0 189 74 0 0 chr17 86885163 86885190 -2619363 + (TC)n Simple_repeat Simple_repeat 2 28 0 593 320 66 18 chr17 86885403 86885631 -2618922 - MIR SINE MIR -1 261 23 256 250 54 65 chr17 86885774 86885866 -2618687 - MIR3 SINE MIR -3 205 115 295 279 62 70 chr17 86886482 86886611 -2617942 + L2 LINE L2 3145 3272 0 271 243 68 0 chr17 86887525 86887599 -2616954 - L3 LINE CR1 -3 1574 1496 21 0 0 0 chr17 86888944 86888965 -2615588 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 86889320 86889348 -2615205 + GC_rich Low_complexity Low_complexity 1 28 0 48 81 0 0 chr17 86890349 86890460 -2614093 + GC_rich Low_complexity Low_complexity 1 111 0 318 313 6 40 chr17 86891504 86891680 -2612873 + GA-rich Low_complexity Low_complexity 3 172 0 405 95 0 0 chr17 86894481 86894544 -2610009 + (CA)n Simple_repeat Simple_repeat 2 64 0 39 45 3 0 chr17 86895014 86895110 -2609443 + GC_rich Low_complexity Low_complexity 1 67 0 26 30 0 0 chr17 86895382 86895415 -2609138 + GC_rich Low_complexity Low_complexity 1 33 0 238 305 134 12 chr17 86896827 86896909 -2607644 - MIR SINE MIR -94 114 23 368 286 153 15 chr17 86897279 86897475 -2607078 + MIR SINE MIR 35 257 -5 306 0 0 0 chr17 86897884 86897918 -2606635 + (TG)n Simple_repeat Simple_repeat 2 35 0 456 35 0 0 chr17 86899043 86899101 -2605452 + (TC)n Simple_repeat Simple_repeat 1 58 0 342 80 0 0 chr17 86899100 86899150 -2605403 + (CA)n Simple_repeat Simple_repeat 1 50 0 * 832 248 88 13 chr17 86902671 86902909 -2601644 - MIR SINE MIR -2 260 5 476 265 111 12 chr17 86903197 86903359 -2601194 + MIR SINE MIR 80 257 -5 380 55 18 0 chr17 86905533 86905588 -2598965 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 185 211 18 0 chr17 86906500 86906557 -2597996 + CT-rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr17 86907511 86907533 -2597020 + GC_rich Low_complexity Low_complexity 1 22 0 219 347 0 0 chr17 86908010 86908108 -2596445 + G-rich Low_complexity Low_complexity 1 98 0 213 132 0 0 chr17 86908375 86908413 -2596140 + (CGG)n Simple_repeat Simple_repeat 3 40 0 294 125 0 0 chr17 86909473 86909521 -2595032 + (CCCA)n Simple_repeat Simple_repeat 1 48 0 216 200 0 0 chr17 86909857 86909927 -2594626 + GA-rich Low_complexity Low_complexity 1 70 0 22 56 0 0 chr17 86913684 86913720 -2590833 + GC_rich Low_complexity Low_complexity 1 36 0 790 250 43 10 chr17 86916403 86916611 -2587942 - MER20 DNA MER1_type -4 215 1 24 0 0 0 chr17 86916810 86916834 -2587719 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 86917240 86917261 -2587292 + AT_rich Low_complexity Low_complexity 1 21 0 395 141 13 0 chr17 86918270 86918348 -2586205 + G-rich Low_complexity Low_complexity 5 83 0 1064 155 12 0 chr17 86918348 86918516 -2586037 + AluJb SINE Alu 133 302 -10 432 245 9 0 chr17 86919385 86919491 -2585062 - MER45A DNA AcHobo -12 166 60 286 258 0 0 chr17 86920522 86920584 -2583969 + G-rich Low_complexity Low_complexity 5 66 0 2202 114 7 13 chr17 86920798 86921104 -2583449 + AluSx SINE Alu 1 304 -8 511 222 189 0 chr17 86921873 86922026 -2582527 - MER53 DNA DNA -6 183 2 1877 148 6 28 chr17 86922097 86922414 -2582139 - AluJo SINE Alu -2 310 1 2025 145 0 13 chr17 86922488 86922798 -2581755 - AluSx SINE Alu -6 306 1 835 178 0 7 chr17 86922803 86922938 -2581615 - AluJo SINE Alu -171 141 8 2346 109 3 0 chr17 86923059 86923363 -2581190 - AluSx SINE Alu -7 305 1 480 313 53 38 chr17 86923372 86923692 -2580861 - L1ME LINE L1 -466 5696 5372 332 341 18 48 chr17 86923711 86923878 -2580675 - L1ME LINE L1 -2616 5426 5265 909 274 86 32 chr17 86924929 86925323 -2579230 + L1MDa LINE L1 3 543 -6000 3641 207 81 59 chr17 86925388 86925613 -2578940 + L1MDa LINE L1 794 1013 -5527 2032 129 0 7 chr17 86925613 86925928 -2578625 - AluJb SINE Alu 0 319 7 3641 207 81 59 chr17 86925928 86926464 -2578089 + L1MDa LINE L1 1013 1536 -5004 2420 87 3 0 chr17 86926464 86926773 -2577780 + AluSx SINE Alu 1 310 -2 3641 207 81 59 chr17 86926773 86927311 -2577242 + L1MDa LINE L1 1536 2061 -4479 2233 99 0 0 chr17 86927311 86927632 -2576921 + AluSx SINE Alu 1 321 0 3641 207 81 59 chr17 86927632 86927795 -2576758 + L1MDa LINE L1 2061 2219 -4321 1748 176 52 0 chr17 86927795 86927909 -2576644 + AluJb SINE Alu 5 112 -200 180 0 0 0 chr17 86927909 86927929 -2576624 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1748 176 52 0 chr17 86927929 86928103 -2576450 + AluJb SINE Alu 112 308 -4 3641 207 81 59 chr17 86928103 86928467 -2576086 + L1MDa LINE L1 2219 2647 -3893 3600 203 83 38 chr17 86928475 86928670 -2575883 + L1MD2 LINE L1 5342 5527 -832 2231 119 30 0 chr17 86928670 86928973 -2575580 + AluSx SINE Alu 1 312 0 3600 203 83 38 chr17 86928973 86929139 -2575414 + L1MD2 LINE L1 5527 5684 -675 1994 158 7 7 chr17 86929139 86929449 -2575104 + AluJo SINE Alu 1 310 -2 3600 203 83 38 chr17 86929449 86930059 -2574494 + L1MD2 LINE L1 5684 6358 -1 521 214 0 0 chr17 86930072 86930175 -2574378 + FLAM_C SINE Alu 30 132 -11 523 184 14 0 chr17 86930175 86930316 -2574237 + G-rich Low_complexity Low_complexity 1 143 0 212 143 0 0 chr17 86933499 86933534 -2571019 + (GGA)n Simple_repeat Simple_repeat 2 36 0 2390 102 0 0 chr17 86933592 86933897 -2570656 + AluSx SINE Alu 1 305 -7 206 326 34 11 chr17 86935907 86935996 -2568557 - MIR3 SINE MIR -4 204 114 24 0 0 0 chr17 86938701 86938725 -2565828 + GC_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr17 86938826 86938869 -2565684 + GC_rich Low_complexity Low_complexity 1 43 0 2005 118 0 4 chr17 86939204 86939474 -2565079 - AluSx SINE Alu -43 269 1 1718 180 3 10 chr17 86939484 86939778 -2564775 - AluJo SINE Alu -14 298 7 1188 40 0 0 chr17 86940032 86940181 -2564372 - L1PA3 LINE L1 0 6155 6007 2420 97 10 0 chr17 86940188 86940497 -2564056 - AluSx SINE Alu 0 312 1 564 212 124 73 chr17 86940895 86941199 -2563354 - MLT2C1 LTR ERVL -9 388 29 1678 177 31 51 chr17 86941702 86941906 -2562647 - MLT1B LTR MaLR -8 382 175 2446 86 0 13 chr17 86941906 86942221 -2562332 - AluY SINE Alu 0 311 1 1978 117 73 0 chr17 86942227 86942500 -2562053 - AluSx SINE Alu -19 293 1 1678 177 31 51 chr17 86942500 86942678 -2561875 - MLT1B LTR MaLR -220 170 1 184 219 24 0 chr17 86942727 86942768 -2561785 - L2 LINE L2 -17 3255 3214 2356 113 6 0 chr17 86942886 86943221 -2561332 + THE1B LTR MaLR 26 362 -2 2456 44 0 0 chr17 86943222 86943494 -2561059 + AluY SINE Alu 1 272 -39 1337 170 0 5 chr17 86943618 86943841 -2560712 - L1P3 LINE L1 -6239 222 1 561 198 63 0 chr17 86943847 86943973 -2560580 - L1ME LINE L1 -566 5600 5467 399 273 64 11 chr17 86943963 86944150 -2560403 - L1MEc LINE L1 -4760 1636 1440 * 1670 169 10 29 chr17 86944151 86944339 -2560214 - AluJb SINE Alu -5 307 126 180 0 0 0 chr17 86944339 86944359 -2560194 + (TA)n Simple_repeat Simple_repeat 1 20 0 1670 169 10 29 chr17 86944359 86944483 -2560070 - AluJb SINE Alu -186 126 1 1358 192 69 49 chr17 86944518 86944582 -2559971 - MLT1D LTR MaLR 0 505 444 2521 88 3 0 chr17 86944582 86944889 -2559664 + AluSg SINE Alu 1 308 -2 1358 192 69 49 chr17 86944889 86945173 -2559380 - MLT1D LTR MaLR -61 444 150 1040 190 93 4 chr17 86945434 86945681 -2558872 - L1MB8 LINE L1 -16 6162 5894 715 181 0 7 chr17 86945686 86945824 -2558729 - FLAM_C SINE Alu -5 138 2 1414 181 121 55 chr17 86945824 86945934 -2558619 - L1MB8 LINE L1 -265 5909 5808 451 69 0 0 chr17 86945934 86945992 -2558561 - Alu SINE Alu -257 61 4 1414 181 121 55 chr17 86945992 86946339 -2558214 - L1MB8 LINE L1 -366 5808 5410 245 224 0 0 chr17 86946369 86946427 -2558126 + Charlie8 DNA MER1_type 102 159 -2258 1914 67 0 0 chr17 86947045 86947270 -2557283 - AluSg/x SINE Alu -9 301 77 182 88 0 29 chr17 86947460 86947494 -2557059 + (CGGGG)n Simple_repeat Simple_repeat 4 36 0 261 57 0 0 chr17 86947557 86947592 -2556961 + (CGGGGG)n Simple_repeat Simple_repeat 1 35 0 668 255 0 0 chr17 86949649 86949798 -2554755 + MER3 DNA MER1_type 55 203 -6 232 250 48 36 chr17 86951391 86951475 -2553078 - L1MC/D LINE L1 -2217 5591 5507 2290 89 0 0 chr17 86951677 86952011 -2552542 + AluSg1 SINE Alu 1 334 0 2283 113 3 3 chr17 86952692 86953001 -2551552 + AluSg1 SINE Alu 1 309 0 2316 101 3 0 chr17 86953214 86953510 -2551043 - AluSq SINE Alu -16 297 1 1449 167 119 30 chr17 86953510 86953747 -2550806 - L1MC/D LINE L1 -743 5403 5188 2405 74 34 0 chr17 86953747 86954043 -2550510 - AluY SINE Alu -5 306 1 1449 167 119 30 chr17 86954043 86954271 -2550282 - L1MC/D LINE L1 -958 5188 4923 1908 117 3 31 chr17 86954769 86954920 -2549633 - AluSx SINE Alu -30 282 141 2084 94 47 0 chr17 86954920 86955195 -2549358 - AluSq SINE Alu -15 298 11 1908 117 3 31 chr17 86955195 86955333 -2549220 - AluSx SINE Alu -171 141 1 1451 231 26 12 chr17 86955333 86955679 -2548874 - L1ME LINE L1 -438 5728 5378 * 2117 197 32 103 chr17 86955675 86956124 -2548429 - L1ME1 LINE L1 -264 5902 5568 1924 150 6 19 chr17 86956124 86956437 -2548116 - AluSx SINE Alu 0 312 4 2117 197 32 103 chr17 86956437 86956892 -2547661 - L1ME1 LINE L1 -598 5568 5082 446 245 9 0 chr17 86957247 86957353 -2547200 + MER45A DNA AcHobo 60 166 -12 244 277 0 12 chr17 86957363 86957446 -2547107 + L1MEc LINE L1 1385 1466 -4930 2083 122 16 10 chr17 86957451 86957754 -2546799 + AluJb SINE Alu 1 305 -7 1794 126 17 66 chr17 86957764 86958066 -2546487 + AluSx SINE Alu 12 298 -14 627 188 8 0 chr17 86958093 86958210 -2546343 - MLT1A1 LTR MaLR 0 365 248 598 276 67 58 chr17 86958355 86958714 -2545839 - L1MC4a LINE L1 -1836 5972 5611 2216 118 3 0 chr17 86958731 86959028 -2545525 + AluSq SINE Alu 1 298 -15 834 87 0 0 chr17 86959028 86959154 -2545399 + L1MB3 LINE L1 6056 6181 -2 479 239 35 0 chr17 86959158 86959271 -2545282 - MER45A DNA AcHobo -61 117 1 289 302 67 41 chr17 86959345 86959613 -2544940 - L1MC4a LINE L1 -1836 5972 5698 1342 169 9 4 chr17 86959786 86960011 -2544542 - AluSx SINE Alu -86 226 1 207 0 0 0 chr17 86960012 86960035 -2544518 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 811 212 35 97 chr17 86960039 86960210 -2544343 - AluJo SINE Alu -25 287 136 2334 111 0 3 chr17 86960210 86960508 -2544045 - AluSx SINE Alu -15 297 1 811 212 35 97 chr17 86960508 86960595 -2543958 - AluJo SINE Alu -176 136 45 986 258 56 28 chr17 86960597 86960993 -2543560 - L1ME1 LINE L1 -1096 5050 4644 31 0 0 0 chr17 86961241 86961272 -2543281 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr17 86961529 86961553 -2543000 + AT_rich Low_complexity Low_complexity 1 24 0 183 80 0 0 chr17 86961594 86961619 -2542934 + (A)n Simple_repeat Simple_repeat 1 25 0 568 216 66 12 chr17 86961637 86961804 -2542749 - L1MC4a LINE L1 -844 5302 5127 2295 85 6 31 chr17 86961883 86962201 -2542352 - AluY SINE Alu -1 310 1 24 0 0 0 chr17 86962566 86962590 -2541963 + AT_rich Low_complexity Low_complexity 1 24 0 192 343 53 35 chr17 86963074 86963243 -2541310 - MIR SINE MIR -19 243 72 1465 156 0 5 chr17 86963403 86963621 -2540932 + AluJb SINE Alu 3 219 -93 35 24 0 0 chr17 86963726 86963768 -2540785 + GC_rich Low_complexity Low_complexity 1 42 0 39 22 0 0 chr17 86963849 86963895 -2540658 + GC_rich Low_complexity Low_complexity 1 46 0 243 336 56 14 chr17 86964681 86964824 -2539729 + L2 LINE L2 3122 3270 -43 5078 165 9 11 chr17 86965389 86966342 -2538211 + L1P LINE L1 1575 2526 -3620 210 171 0 24 chr17 86966431 86966472 -2538081 + CT-rich Low_complexity Low_complexity 3 42 0 21 0 0 0 chr17 86967034 86967055 -2537498 + AT_rich Low_complexity Low_complexity 1 21 0 397 283 8 17 chr17 87168240 87168360 -2336193 + GA-rich Low_complexity Low_complexity 1 119 0 402 208 92 16 chr17 87169455 87169613 -2334940 + L1ME2 LINE L1 5576 5738 -426 1817 173 68 149 chr17 87169816 87170562 -2333991 + LTR8A LTR ERV1 34 719 -8 805 243 15 5 chr17 87170577 87170779 -2333774 + L1ME2 LINE L1 5941 6144 -20 527 190 62 99 chr17 87172363 87172545 -2332008 - HsTC2 DNA Tc2 -5 1893 1719 2528 83 0 0 chr17 87172545 87172847 -2331706 - AluSx SINE Alu -10 302 1 527 190 62 99 chr17 87172847 87172875 -2331678 - HsTC2 DNA Tc2 -179 1719 1691 785 160 8 0 chr17 87172889 87173014 -2331539 + FLAM_C SINE Alu 1 126 -7 1301 90 18 0 chr17 87173036 87173203 -2331350 + AluSc SINE Alu 3 172 -137 665 198 0 0 chr17 87173304 87173420 -2331133 + FRAM SINE Alu 31 146 -30 1827 176 10 10 chr17 87173435 87173730 -2330823 + AluJb SINE Alu 1 295 -17 5996 24 7 1 chr17 87174886 87175670 -2328883 + L1PA3 LINE L1 5415 6202 0 29 0 0 0 chr17 87175905 87175934 -2328619 + AT_rich Low_complexity Low_complexity 1 29 0 229 345 58 55 chr17 87176297 87176513 -2328040 - L1MEd LINE L1 -3669 2460 2241 1465 160 0 0 chr17 87176513 87176738 -2327815 - AluJo SINE Alu -1 311 87 229 345 58 55 chr17 87176738 87176851 -2327702 - L1MEd LINE L1 -3888 2241 2130 342 343 80 57 chr17 87176858 87177208 -2327345 - L1MEd LINE L1 -4917 1202 845 671 225 72 72 chr17 87179113 87179186 -2325367 + MER58A DNA MER1_type 1 73 -2347 2507 84 10 0 chr17 87179186 87179494 -2325059 + AluSq SINE Alu 1 311 -2 671 225 72 72 chr17 87179494 87179642 -2324911 + MER58A DNA MER1_type 72 222 -2 387 288 92 0 chr17 87179860 87180013 -2324540 + L1ME4a LINE L1 5952 6118 -3 685 204 8 0 chr17 87180581 87180713 -2323840 - FLAM_A SINE Alu 0 133 1 284 331 0 45 chr17 87181286 87181440 -2323113 + L2 LINE L2 2695 2841 -473 745 127 0 8 chr17 87182062 87182188 -2322365 + L1MA4 LINE L1 6165 6289 -11 361 133 0 0 chr17 87182208 87182268 -2322285 + MSTD LTR MaLR 337 396 0 338 136 34 0 chr17 87182871 87182930 -2321623 - MSTD LTR MaLR 0 396 336 736 99 0 78 chr17 87182941 87183082 -2321471 - L1MA4 LINE L1 -3 6297 6168 908 150 53 21 chr17 87183082 87183269 -2321284 - L1M1 LINE L1 -7357 208 16 733 183 21 38 chr17 87183247 87183433 -2321120 - L1MA4 LINE L1 -106 7613 7431 * 1367 195 129 3 chr17 87183435 87183737 -2320816 - MSTD LTR MaLR -56 340 1 2017 169 0 7 chr17 87184016 87184324 -2320229 - AluSx SINE Alu 0 312 7 840 142 0 8 chr17 87184332 87184466 -2320087 - FLAM_C SINE Alu 0 133 1 2781 17 3 0 chr17 87186132 87186432 -2318121 - AluY SINE Alu -10 301 1 278 252 84 19 chr17 87186613 87186720 -2317833 + L1ME4a LINE L1 6007 6120 -1 22 56 0 0 chr17 87188798 87188834 -2315719 + AT_rich Low_complexity Low_complexity 1 36 0 439 246 18 0 chr17 87188857 87188967 -2315586 - L1MB3 LINE L1 0 6183 6072 750 204 19 0 chr17 87189635 87189792 -2314761 + AluJb SINE Alu 3 162 -150 1655 203 0 10 chr17 87189919 87190220 -2314333 + AluJo SINE Alu 1 298 -14 2022 112 7 0 chr17 87192418 87192721 -2311832 - AluSx SINE Alu 0 309 5 2314 100 3 3 chr17 87193482 87193781 -2310772 - AluSq SINE Alu -14 299 1 213 200 53 53 chr17 87195060 87195230 -2309323 + (CTAGGG)n Simple_repeat Simple_repeat 5 174 0 222 199 53 53 chr17 87195473 87195644 -2308909 + (CTAGGG)n Simple_repeat Simple_repeat 5 175 0 454 275 3 6 chr17 87196700 87197051 -2307502 + (TG)n Simple_repeat Simple_repeat 1 350 0 272 228 7 47 chr17 87197023 87197172 -2307381 + (TATATG)n Simple_repeat Simple_repeat 6 148 0 * 534 309 141 57 chr17 87197261 87198340 -2306213 + L2 LINE L2 1466 2635 -679 1173 206 36 4 chr17 87198490 87198738 -2305815 - L1M4 LINE L1 -550 5628 5373 * 3440 251 71 33 chr17 87198716 87200076 -2304477 - L1M4 LINE L1 -1983 4163 2752 332 336 60 0 chr17 87200210 87200359 -2304194 - L1M4 LINE L1 -1923 4223 4066 1026 148 0 5 chr17 87201042 87201403 -2303150 + (CCA)n Simple_repeat Simple_repeat 1 539 0 212 284 280 14 chr17 87201417 87201455 -2303098 + L2 LINE L2 2549 2576 -738 1125 123 0 0 chr17 87201455 87201634 -2302919 + (CCA)n Simple_repeat Simple_repeat 1 179 0 212 284 280 14 chr17 87201634 87201806 -2302747 + L2 LINE L2 2576 2815 -499 1495 213 113 41 chr17 87204521 87205352 -2299201 + LTR28 LTR ERV1 14 1019 -1 257 356 79 6 chr17 87206799 87206976 -2297577 - MIR SINE MIR -37 225 36 519 271 23 63 chr17 87208654 87208875 -2295678 + MER20 DNA MER1_type 8 219 0 1885 156 7 26 chr17 87209241 87209383 -2295170 + AluJo SINE Alu 1 144 -168 2324 98 3 0 chr17 87209383 87209670 -2294883 + AluSx SINE Alu 1 288 -24 456 19 0 0 chr17 87209670 87209723 -2294830 + (CATAA)n Simple_repeat Simple_repeat 2 54 0 1885 156 7 26 chr17 87209723 87209886 -2294667 + AluJo SINE Alu 142 301 -11 659 245 47 56 chr17 87210218 87210451 -2294102 + L1MC5 LINE L1 6675 6905 -1056 310 216 23 11 chr17 87210494 87210582 -2293971 + (CA)n Simple_repeat Simple_repeat 1 89 0 815 267 97 77 chr17 87210670 87210836 -2293717 + L1MC5 LINE L1 6968 7129 -832 1694 216 0 7 chr17 87210836 87211142 -2293411 + AluJo SINE Alu 1 304 -8 815 267 97 77 chr17 87211142 87211575 -2292978 + L1MC5 LINE L1 7129 7579 -382 240 35 0 0 chr17 87211575 87211604 -2292949 + (TG)n Simple_repeat Simple_repeat 2 30 0 370 227 5 111 chr17 87211615 87211813 -2292740 + L1MC5 LINE L1 7705 7881 -80 201 259 0 19 chr17 87211823 87211877 -2292676 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 308 259 104 15 chr17 87212963 87213098 -2291455 - MER91A DNA MER1_type -3 193 47 295 205 84 24 chr17 87213350 87213433 -2291120 + MLT1L LTR MaLR 307 394 -221 451 176 22 198 chr17 87213576 87213798 -2290755 + MIR SINE MIR 75 257 -5 356 289 14 92 chr17 87215463 87215527 -2289026 + MIR SINE MIR 117 184 -78 1812 25 0 0 chr17 87215527 87215780 -2288773 + AluY SINE Alu 84 336 0 1470 42 0 0 chr17 87215780 87215947 -2288606 + AluY SINE Alu 130 296 -15 356 289 14 92 chr17 87215947 87216022 -2288531 + MIR SINE MIR 182 247 -15 322 185 40 80 chr17 87216444 87216495 -2288058 + L1MC4a LINE L1 5319 5370 -2438 270 0 0 0 chr17 87216495 87216525 -2288028 + (TA)n Simple_repeat Simple_repeat 2 31 0 322 185 40 80 chr17 87216525 87216554 -2287999 + L1MC4a LINE L1 5370 5399 -2409 1510 164 36 33 chr17 87216554 87216828 -2287725 + AluJo SINE Alu 1 275 -37 322 185 40 80 chr17 87216828 87216897 -2287656 + L1MC4a LINE L1 5399 5463 -2345 1225 267 164 31 chr17 87217089 87217486 -2287067 + L1MC4a LINE L1 5512 5855 -1953 2432 55 0 7 chr17 87217486 87217810 -2286743 + AluY SINE Alu 1 322 0 1225 267 164 31 chr17 87217810 87218269 -2286284 + L1MC4a LINE L1 5855 6484 -1324 1754 263 163 12 chr17 87218278 87219113 -2285440 + L1MC4 LINE L1 6771 7749 -293 1820 151 3 47 chr17 87219113 87219431 -2285122 + AluJo SINE Alu 1 304 -8 1754 263 163 12 chr17 87219431 87219484 -2285069 + L1MC4 LINE L1 7749 7793 -249 911 221 90 80 chr17 87219484 87219810 -2284743 - MLT1D LTR MaLR -45 422 110 1679 168 11 7 chr17 87219810 87220090 -2284463 + AluJo SINE Alu 1 281 -31 911 221 90 80 chr17 87220090 87220202 -2284351 - MLT1D LTR MaLR -357 110 1 2107 124 17 0 chr17 87221404 87221703 -2282850 - AluSg SINE Alu -6 304 1 856 106 0 30 chr17 87222821 87222953 -2281600 - AluSg/x SINE Alu -12 297 170 420 93 0 0 chr17 87222953 87223007 -2281546 - AluSq SINE Alu -110 203 150 449 209 108 0 chr17 87223520 87223659 -2280894 - L1MD3 LINE L1 -13 7982 7829 926 149 0 0 chr17 87223659 87223793 -2280760 - AluJo SINE Alu -178 134 1 195 326 88 34 chr17 87224571 87224718 -2279835 - L2 LINE L2 -430 2884 2730 453 301 124 5 chr17 87226727 87227076 -2277477 + L1MEd LINE L1 570 879 -5240 325 167 0 0 chr17 87227223 87227283 -2277270 + HSMAR2 DNA Mariner 1175 1234 -68 1298 75 0 0 chr17 87227284 87227444 -2277109 - AluY SINE Alu -8 303 144 289 294 86 13 chr17 87227572 87227773 -2276780 + MLT1J LTR MaLR 1 264 -247 6714 146 29 31 chr17 87227797 87228875 -2275678 + HSMAR2 DNA Mariner 41 1120 -182 2063 119 34 14 chr17 87228875 87229170 -2275383 + AluSx SINE Alu 1 301 -11 6714 146 29 31 chr17 87229170 87229289 -2275264 + HSMAR2 DNA Mariner 1120 1237 -65 2388 77 0 10 chr17 87229289 87229587 -2274966 - AluY SINE Alu -16 295 1 6714 146 29 31 chr17 87229587 87229652 -2274901 + HSMAR2 DNA Mariner 1237 1301 -1 474 241 45 90 chr17 87229656 87229901 -2274652 + MLT1J LTR MaLR 268 501 -10 252 304 13 13 chr17 87231432 87231511 -2273042 - L2 LINE L2 -53 3219 3141 219 344 119 12 chr17 87231924 87232084 -2272469 + MIR3 SINE MIR 30 206 -2 2420 68 7 0 chr17 87232409 87232705 -2271848 + AluSp SINE Alu 1 298 -15 196 333 10 10 chr17 87234739 87234841 -2269712 + L2 LINE L2 2958 3059 -213 235 245 0 0 chr17 87235384 87235437 -2269116 + L2 LINE L2 3261 3313 0 180 366 108 0 chr17 87235442 87235535 -2269018 + L2 LINE L2 3134 3236 -36 2347 50 7 4 chr17 87236245 87236523 -2268030 + AluY SINE Alu 1 279 -32 860 71 26 26 chr17 87236523 87236677 -2267876 + (GGAAA)n Simple_repeat Simple_repeat 5 158 0 431 293 103 80 chr17 87238461 87238772 -2265781 + HAL1 LINE L1 678 995 -1512 1907 166 7 0 chr17 87239620 87239915 -2264638 - AluJo SINE Alu -15 297 1 1504 199 78 6 chr17 87240744 87241065 -2263488 + MER2 DNA MER2_type 1 344 0 313 279 70 23 chr17 87241319 87241448 -2263105 + HAL1 LINE L1 1639 1773 -734 497 270 35 39 chr17 87242211 87242441 -2262112 + HAL1 LINE L1 2273 2501 -6 21 0 0 0 chr17 87243904 87243925 -2260628 + AT_rich Low_complexity Low_complexity 1 21 0 1445 208 7 17 chr17 87244629 87244923 -2259630 + AluJb SINE Alu 1 291 -21 2219 103 7 0 chr17 87245401 87245693 -2258860 + AluSx SINE Alu 1 294 -18 498 269 67 21 chr17 87246946 87247228 -2257325 + L1MC/D LINE L1 4550 4844 -1302 234 0 0 0 chr17 87247333 87247359 -2257194 + (CA)n Simple_repeat Simple_repeat 2 27 0 302 242 177 24 chr17 87247624 87247748 -2256805 + L1MC/D LINE L1 5315 5457 -2351 345 100 0 0 chr17 87247749 87247799 -2256754 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 386 273 174 12 chr17 87247799 87248065 -2256488 + L1MC/D LINE L1 5442 5747 -460 277 274 280 6 chr17 87248067 87248224 -2256329 + MLT1J2 LTR MaLR 1 143 -307 366 213 180 60 chr17 87249718 87249901 -2254652 - MER20 DNA MER1_type -14 205 1 2585 251 140 21 chr17 87252035 87253142 -2251411 + L1MC4a LINE L1 6648 7801 -7 32 26 0 0 chr17 87253727 87253766 -2250787 + AT_rich Low_complexity Low_complexity 1 39 0 288 254 47 78 chr17 87254916 87255109 -2249444 + MER5A DNA MER1_type 1 187 -2 2035 73 42 17 chr17 87255503 87255790 -2248763 - AluSq SINE Alu -19 294 1 286 321 29 58 chr17 87258413 87258550 -2246003 - L2 LINE L2 -8 3305 3173 6136 137 25 5 chr17 87258670 87260211 -2244342 + L1PB1 LINE L1 4582 6150 -1 338 302 21 10 chr17 87260274 87260370 -2244183 - L2 LINE L2 -21 3292 3196 2481 238 71 95 chr17 87260397 87260789 -2243764 - L1M4 LINE L1 -2673 3473 3073 1825 138 3 7 chr17 87260789 87261079 -2243474 + AluSx SINE Alu 1 289 -23 2481 238 71 95 chr17 87261079 87261571 -2242982 - L1M4 LINE L1 -3073 3073 2629 2121 99 0 7 chr17 87261571 87261865 -2242688 + AluSq SINE Alu 1 292 -21 2481 238 71 95 chr17 87261865 87262297 -2242256 - L1M4 LINE L1 -3517 2629 2188 4306 212 74 8 chr17 87262383 87262466 -2242087 + L1MC2 LINE L1 5181 5257 -1087 1792 102 92 11 chr17 87262466 87262749 -2241804 + AluSq SINE Alu 1 306 -7 4306 212 74 8 chr17 87262749 87263764 -2240789 + L1MC2 LINE L1 5257 6344 0 2227 96 0 3 chr17 87263769 87264081 -2240472 + AluSx SINE Alu 2 312 0 21 0 0 0 chr17 87264127 87264148 -2240405 + AT_rich Low_complexity Low_complexity 1 21 0 791 322 75 41 chr17 87264532 87265219 -2239334 + L1 LINE L1 3185 3916 -2230 405 0 0 0 chr17 87265219 87265264 -2239289 + (CA)n Simple_repeat Simple_repeat 2 46 0 791 322 75 41 chr17 87265264 87265532 -2239021 + L1 LINE L1 3916 4173 -1973 1806 131 3 58 chr17 87265538 87265851 -2238702 + AluJb SINE Alu 1 296 -16 189 264 132 99 chr17 87267989 87268063 -2236490 + MIR SINE MIR 61 142 -120 1363 188 50 14 chr17 87268063 87268345 -2236208 + AluJo SINE Alu 2 293 -19 189 264 132 99 chr17 87268345 87268391 -2236162 + MIR SINE MIR 142 185 -77 470 309 59 26 chr17 87268681 87268985 -2235568 + L1 LINE L1 4294 4607 -1539 763 145 7 35 chr17 87269920 87270065 -2234488 + FLAM_C SINE Alu 2 142 -1 221 28 83 0 chr17 87273493 87273529 -2231024 + A-rich Low_complexity Low_complexity 2 40 0 328 331 17 35 chr17 87274710 87274882 -2229671 + L2 LINE L2 2430 2598 -716 1067 121 0 16 chr17 87274883 87274942 -2229611 + (CACCAT)n Simple_repeat Simple_repeat 1 237 0 1067 121 0 16 chr17 87274942 87275124 -2229429 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 522 129 12 0 chr17 87275378 87275463 -2229090 + AluSc SINE Alu 210 295 -14 1174 122 12 0 chr17 87275464 87275636 -2228917 + AluJb SINE Alu 121 294 -18 279 240 48 48 chr17 87275638 87275763 -2228790 - HsTC2 DNA Tc2 -219 1679 1555 318 252 225 50 chr17 87276079 87276801 -2227752 + L1MDb LINE L1 1118 1963 -4443 448 199 44 55 chr17 87277040 87277221 -2227332 + L1MDb LINE L1 2303 2481 -4106 2113 110 10 0 chr17 87278606 87278898 -2225655 + AluSx SINE Alu 1 295 -17 1175 172 12 117 chr17 87279239 87279582 -2224971 + AluJo SINE Alu 6 312 0 1895 139 0 0 chr17 87279602 87279876 -2224677 + AluSx SINE Alu 13 286 -26 24 32 0 0 chr17 87280241 87280272 -2224281 + AT_rich Low_complexity Low_complexity 1 31 0 669 142 117 17 chr17 87281579 87281699 -2222854 - FLAM_C SINE Alu 0 133 2 3011 171 54 141 chr17 87281864 87282387 -2222166 + L1MB5 LINE L1 5275 5842 -332 486 179 0 0 chr17 87282387 87282465 -2222088 + FLAM SINE Alu 43 120 -23 3011 171 54 141 chr17 87282465 87282788 -2221765 + L1MB5 LINE L1 5842 6109 -65 2156 92 3 16 chr17 87282788 87282954 -2221599 - AluSx SINE Alu -13 299 137 2018 60 53 18 chr17 87282954 87283237 -2221316 - AluY SINE Alu -18 293 1 2156 92 3 16 chr17 87283237 87283373 -2221180 - AluSx SINE Alu -175 137 1 3011 171 54 141 chr17 87283373 87283434 -2221119 + L1MB5 LINE L1 6109 6174 0 257 266 59 37 chr17 87284370 87284468 -2220085 - MIR SINE MIR -103 105 7 2057 124 95 18 chr17 87285891 87286229 -2218324 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr17 87290483 87290505 -2214048 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 87290645 87290665 -2213888 + (A)n Simple_repeat Simple_repeat 1 20 0 1213 148 82 20 chr17 87291795 87292098 -2212455 - Charlie1 DNA MER1_type 0 2761 2440 2345 243 28 35 chr17 87292623 87293162 -2211391 - Charlie1 DNA MER1_type -231 2530 1996 1865 125 50 0 chr17 87293162 87293459 -2211094 + AluSx SINE Alu 1 312 0 2345 243 28 35 chr17 87293459 87293624 -2210929 - Charlie1 DNA MER1_type -765 1996 1831 1965 157 44 37 chr17 87293624 87294007 -2210546 + Tigger1 DNA MER2_type 1973 2358 -60 23 0 0 0 chr17 87294063 87294086 -2210467 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 87294106 87294127 -2210426 + AT_rich Low_complexity Low_complexity 1 21 0 266 270 40 27 chr17 87294179 87294253 -2210300 - MER5A DNA MER1_type -26 163 89 21 36 0 0 chr17 87295212 87295240 -2209313 + AT_rich Low_complexity Low_complexity 1 28 0 293 258 134 21 chr17 87295557 87295654 -2208899 - MIR3 SINE MIR -14 194 87 221 279 0 0 chr17 87296356 87296399 -2208154 + MIR SINE MIR 63 105 -157 1176 180 51 9 chr17 87296964 87297181 -2207372 + AluJo SINE Alu 87 312 0 1143 237 95 15 chr17 87298898 87299236 -2205317 + MLT1A1 LTR MaLR 1 365 0 364 262 121 46 chr17 87299379 87299533 -2205020 - MIR SINE MIR -62 146 32 251 280 0 0 chr17 87300468 87300543 -2204010 + L1MC4 LINE L1 6467 6541 -1501 531 185 0 63 chr17 87300655 87301023 -2203530 + (CA)n Simple_repeat Simple_repeat 1 344 0 312 200 0 63 chr17 87301034 87301224 -2203329 + (CA)n Simple_repeat Simple_repeat 1 178 0 417 173 4 61 chr17 87301278 87301542 -2203011 + (CA)n Simple_repeat Simple_repeat 1 248 0 589 233 145 18 chr17 87301543 87301881 -2202672 + L1MC3 LINE L1 6602 6988 -820 676 314 137 15 chr17 87301881 87302473 -2202080 + L1MC4 LINE L1 7238 7901 -141 1824 163 28 3 chr17 87302527 87302815 -2201738 + AluJo SINE Alu 1 295 -17 1223 131 0 86 chr17 87303680 87303902 -2200651 - AluJo SINE Alu -24 288 86 524 277 54 30 chr17 87303922 87304149 -2200404 + L1MCa LINE L1 19 236 -6187 279 313 49 31 chr17 87304156 87304319 -2200234 + L1MCa LINE L1 269 434 -5989 453 301 54 43 chr17 87304540 87304889 -2199664 + L1MCa LINE L1 752 1104 -5319 1145 203 17 8 chr17 87304891 87305132 -2199421 + MLT2C1 LTR ERVL 1 243 -154 191 122 0 49 chr17 87305133 87305174 -2199379 + (CATA)n Simple_repeat Simple_repeat 4 42 0 269 130 22 0 chr17 87305176 87305222 -2199331 + MLT2C1 LTR ERVL 351 397 0 711 275 44 23 chr17 87305326 87305660 -2198893 + L1MCa LINE L1 1265 1620 -4926 792 272 73 46 chr17 87306750 87306916 -2197637 + L1MCa LINE L1 1933 2093 -5029 636 193 0 44 chr17 87306916 87307051 -2197502 + FLAM_A SINE Alu 3 131 -2 792 272 73 46 chr17 87307051 87307516 -2197037 + L1MCa LINE L1 2093 2581 -4541 * 1943 209 79 41 chr17 87307506 87307557 -2196996 + L1ME1 LINE L1 5563 5611 -555 2527 70 3 3 chr17 87307557 87307858 -2196695 + AluSp SINE Alu 1 301 -12 1943 209 79 41 chr17 87307858 87308375 -2196178 + L1ME1 LINE L1 5611 6107 -59 1477 108 5 0 chr17 87308375 87308570 -2195983 + AluSq SINE Alu 1 196 -117 1727 160 33 39 chr17 87308570 87308882 -2195671 + L1MB3 LINE L1 5824 6135 -48 243 0 0 0 chr17 87308882 87308909 -2195644 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1727 160 33 39 chr17 87308909 87308958 -2195595 + L1MB3 LINE L1 6135 6183 0 647 277 151 5 chr17 87308967 87309173 -2195380 + MIR SINE MIR 27 262 0 2117 115 0 0 chr17 87309355 87309642 -2194911 + AluSc SINE Alu 21 307 -2 442 250 8 8 chr17 87310245 87310369 -2194184 - L1ME LINE L1 -463 5658 5535 359 307 62 58 chr17 87310496 87310737 -2193816 + L2 LINE L2 2849 3090 -223 894 323 83 53 chr17 87310911 87311512 -2193041 - L1ME LINE L1 -1115 5031 4413 948 213 0 0 chr17 87311618 87311792 -2192761 + FAM SINE Alu 1 43 -6 396 176 88 48 chr17 87311796 87311850 -2192703 + L1MA4 LINE L1 6122 6172 -128 2394 114 0 0 chr17 87311850 87312158 -2192395 + AluSx SINE Alu 1 308 -4 396 176 88 48 chr17 87312158 87312228 -2192325 + L1MA4 LINE L1 6172 6251 -49 589 308 135 36 chr17 87312231 87312669 -2191884 - L1ME LINE L1 -1695 4451 3971 23 0 0 0 chr17 87312730 87312753 -2191800 + AT_rich Low_complexity Low_complexity 1 23 0 1872 158 6 13 chr17 87312756 87313067 -2191486 - AluJb SINE Alu -3 309 1 22 0 0 0 chr17 87314324 87314346 -2190207 + AT_rich Low_complexity Low_complexity 1 22 0 2072 133 0 3 chr17 87314902 87315203 -2189350 - AluSx SINE Alu -12 300 1 347 196 63 112 chr17 87315514 87315657 -2188896 + MIR3 SINE MIR 72 207 -1 402 258 211 0 chr17 87315933 87316123 -2188430 - MER46C DNA MER2_type -106 232 3 2124 120 0 20 chr17 87317399 87317698 -2186855 + AluSx SINE Alu 1 293 -19 297 164 0 0 chr17 87318301 87318356 -2186197 + L1MB8 LINE L1 6124 6178 0 * 312 228 79 10 chr17 87318349 87318450 -2186103 + L1ME4a LINE L1 5813 5920 -201 302 179 119 112 chr17 87318466 87318600 -2185953 + L1ME4a LINE L1 5978 6112 -9 551 139 0 13 chr17 87318971 87319050 -2185503 - FRAM/FAM SINE Alu -105 71 1 2338 95 10 0 chr17 87319088 87319383 -2185170 + AluSg SINE Alu 1 298 -12 315 338 41 7 chr17 87320192 87320337 -2184216 + LTR67 LTR ERVL 36 185 -372 1385 166 0 9 chr17 87322795 87323012 -2181541 - AluJo SINE Alu -12 300 86 1603 199 0 11 chr17 87323259 87323541 -2181012 + AluJo SINE Alu 10 288 -24 337 275 54 58 chr17 87323607 87324128 -2180425 + L1MC4 LINE L1 7261 7877 -165 1875 142 0 18 chr17 87324128 87324425 -2180128 + AluSx SINE Alu 15 306 0 337 275 54 58 chr17 87324425 87324591 -2179962 + L1MC4 LINE L1 7877 8042 0 270 136 0 0 chr17 87325481 87325525 -2179028 + (GGAGAA)n Simple_repeat Simple_repeat 4 47 0 297 0 0 0 chr17 87325872 87325905 -2178648 + (CA)n Simple_repeat Simple_repeat 2 34 0 2327 105 3 0 chr17 87325920 87326215 -2178338 - AluSx SINE Alu -16 296 1 225 289 77 29 chr17 87327085 87327189 -2177364 + MIR SINE MIR 84 192 -70 410 263 13 20 chr17 87327291 87327443 -2177110 + L1MC4a LINE L1 5826 5976 -1832 209 132 0 26 chr17 87328059 87328097 -2176456 + (TA)n Simple_repeat Simple_repeat 2 38 0 737 163 8 31 chr17 87328437 87328566 -2175987 + FLAM_C SINE Alu 2 127 -6 252 0 0 0 chr17 87328866 87328894 -2175659 + (TGGA)n Simple_repeat Simple_repeat 4 31 0 224 320 26 0 chr17 87328896 87328974 -2175579 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 463 157 39 69 chr17 87329231 87329333 -2175220 + AluJo SINE Alu 71 169 -143 2381 77 3 0 chr17 87329365 87329662 -2174891 + AluY SINE Alu 1 298 -13 251 272 232 0 chr17 87329922 87330047 -2174506 - MIR SINE MIR -19 243 90 741 139 7 44 chr17 87330616 87330753 -2173800 + FLAM_C SINE Alu 2 133 0 2673 85 31 6 chr17 87330757 87331111 -2173442 + THE1B LTR MaLR 2 364 0 2305 210 41 9 chr17 87331613 87332151 -2172402 + MER68 LTR ERV1 1 555 -7 547 294 130 12 chr17 87333469 87333892 -2170661 - MLT1G LTR MaLR -89 505 18 356 277 0 0 chr17 87333892 87333975 -2170578 - MLT1G1 LTR MaLR -511 84 2 488 269 42 36 chr17 87334850 87335043 -2169510 - MLT1G-int LTR MaLR -879 492 299 704 174 144 25 chr17 87335339 87335540 -2169013 - MLT1G LTR MaLR 0 590 366 444 184 51 0 chr17 87335616 87335714 -2168839 - MLT1G1 LTR MaLR -441 154 52 667 167 61 0 chr17 87335744 87335858 -2168695 + AluJo SINE Alu 166 286 -26 534 16 0 0 chr17 87335858 87335921 -2168632 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 1806 168 0 7 chr17 87336649 87336934 -2167619 - AluJb SINE Alu -21 291 9 1555 189 64 10 chr17 87336987 87337283 -2167270 + AluJo SINE Alu 1 312 0 1759 171 0 4 chr17 87339046 87339326 -2165227 + AluJo SINE Alu 3 281 -31 576 86 0 0 chr17 87540786 87540867 -1963686 - AluY SINE Alu -230 81 1 542 120 54 43 chr17 87540869 87540961 -1963592 - AluJ/FLAM SINE Alu -219 93 1 552 326 63 66 chr17 87540963 87541050 -1963503 - L1M4 LINE L1 -3319 2827 2741 2126 101 3 14 chr17 87541050 87541347 -1963206 - AluSp SINE Alu -19 294 1 552 326 63 66 chr17 87541347 87541492 -1963061 - L1M4 LINE L1 -3405 2741 2597 2318 75 0 25 chr17 87541492 87541811 -1962742 - AluY SINE Alu 0 311 1 552 326 63 66 chr17 87541811 87541973 -1962580 - L1M4 LINE L1 -3549 2597 2433 2125 75 0 17 chr17 87542151 87542443 -1962110 - AluY SINE Alu -24 287 1 645 314 95 17 chr17 87542446 87542867 -1961686 - L1ME3 LINE L1 -35 6127 5674 180 242 113 0 chr17 87544300 87544362 -1960191 - L3 LINE CR1 -38 1539 1471 239 343 10 0 chr17 87545113 87545212 -1959341 - MER117 DNA MER1_type -40 157 58 196 304 76 13 chr17 87547558 87547637 -1956916 + MIR SINE MIR 59 142 -120 1368 263 98 5 chr17 87547762 87548200 -1956353 + MLT1J LTR MaLR 25 503 -8 261 348 49 18 chr17 87548472 87548636 -1955917 + L2 LINE L2 3125 3293 -20 332 47 0 0 chr17 87550483 87550526 -1954027 - AluY SINE Alu -194 107 65 1245 125 0 15 chr17 87550526 87550592 -1953961 - AluSc SINE Alu -112 197 132 2138 93 0 0 chr17 87550592 87550870 -1953683 - AluSg SINE Alu -11 299 22 1245 125 0 15 chr17 87550870 87551003 -1953550 - AluSc SINE Alu -177 132 1 763 155 16 0 chr17 87551008 87551137 -1953416 - FLAM_C SINE Alu -2 131 1 181 295 134 18 chr17 87551837 87551949 -1952604 + L2 LINE L2 3181 3305 -8 222 208 0 0 chr17 87552115 87552168 -1952385 + (CA)n Simple_repeat Simple_repeat 1 53 0 857 211 29 93 chr17 87552173 87552242 -1952311 - L1MD1 LINE L1 0 6242 6170 2388 68 3 0 chr17 87552242 87552537 -1952016 + AluSp SINE Alu 1 296 -17 857 211 29 93 chr17 87552537 87552747 -1951806 - L1MD1 LINE L1 -72 6170 5981 331 176 54 0 chr17 87552751 87552825 -1951728 - L1MD1 LINE L1 -348 5894 5817 327 213 0 0 chr17 87552825 87552900 -1951653 + CT-rich Low_complexity Low_complexity 4 78 0 31 68 0 0 chr17 87554155 87554214 -1950339 + GC_rich Low_complexity Low_complexity 1 59 0 27 0 0 0 chr17 87554820 87554847 -1949706 + GC_rich Low_complexity Low_complexity 1 27 0 1164 244 51 80 chr17 87555650 87555677 -1948876 + L1ME LINE L1 4983 5009 -1153 2149 126 0 0 chr17 87555677 87555986 -1948567 + AluSx SINE Alu 1 309 -3 1164 244 51 80 chr17 87555986 87556067 -1948486 + L1ME LINE L1 5009 5091 -1071 2364 87 0 0 chr17 87556067 87556367 -1948186 + AluSx SINE Alu 1 300 -12 1164 244 51 80 chr17 87556367 87556770 -1947783 + L1ME LINE L1 5091 5504 -658 2017 142 3 0 chr17 87556770 87557079 -1947474 - AluSx SINE Alu -2 310 1 1164 244 51 80 chr17 87557079 87557253 -1947300 + L1ME LINE L1 5504 5646 -516 941 251 64 85 chr17 87557253 87557676 -1946877 + MLT2D LTR ERVL 1 414 0 1164 244 51 80 chr17 87557676 87557753 -1946800 + L1ME LINE L1 5646 5724 -438 219 135 13 0 chr17 87558620 87558666 -1945887 + MIR SINE MIR 99 144 -118 531 184 28 18 chr17 87563816 87563925 -1940628 - AluJo SINE Alu -93 219 110 993 257 43 0 chr17 87563925 87564182 -1940371 + L1MC4 LINE L1 6652 6919 -1123 1794 149 7 32 chr17 87564185 87564340 -1940213 + AluJb SINE Alu 1 146 -166 2798 82 6 6 chr17 87564340 87564704 -1939849 - THE1B LTR MaLR 0 364 1 1794 149 7 32 chr17 87564704 87564857 -1939696 + AluJb SINE Alu 146 301 -11 2154 61 0 0 chr17 87564857 87565119 -1939434 + AluY SINE Alu 1 262 -49 259 253 33 44 chr17 87565124 87565136 -1939417 + L1MC4 LINE L1 6911 6922 -1120 229 0 83 0 chr17 87565136 87565172 -1939381 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 259 253 33 44 chr17 87565172 87565250 -1939303 + L1MC4 LINE L1 6922 7000 -1042 232 77 26 0 chr17 87565261 87565300 -1939253 + L1MC4 LINE L1 7139 7178 -864 2022 131 0 7 chr17 87565301 87565598 -1938955 + AluSq SINE Alu 1 295 -18 2147 74 16 16 chr17 87565601 87565910 -1938643 + AluSg SINE Alu 1 309 -1 390 237 42 0 chr17 87565913 87566031 -1938522 + L1MC4 LINE L1 7914 8036 -6 1875 180 0 4 chr17 87566066 87566482 -1938071 + L1ME3 LINE L1 5194 5606 -743 1406 124 0 0 chr17 87566484 87566685 -1937868 + AluSg/x SINE Alu 100 300 -12 1483 123 0 0 chr17 87566785 87566996 -1937557 + AluSg/x SINE Alu 98 308 -4 585 282 31 2 chr17 87567077 87567287 -1937266 + L1ME3 LINE L1 5686 5890 -272 1774 98 91 0 chr17 87567422 87567700 -1936853 - AluSg SINE Alu 0 306 6 204 278 22 0 chr17 87567803 87567893 -1936660 + G-rich Low_complexity Low_complexity 5 96 0 253 220 0 0 chr17 87567922 87567972 -1936581 + MIR SINE MIR 101 150 -58 2165 104 0 3 chr17 87568266 87568563 -1935990 - AluSp SINE Alu -17 296 1 2068 103 38 3 chr17 87568567 87568858 -1935695 - AluSx SINE Alu -11 301 1 495 286 0 27 chr17 87569379 87569564 -1934989 + C-rich Low_complexity Low_complexity 1 180 0 362 248 11 15 chr17 87569610 87569726 -1934827 + MIR SINE MIR 36 147 -61 207 250 42 0 chr17 87570105 87570153 -1934400 + MIR SINE MIR 94 143 -119 560 268 94 9 chr17 87570671 87570895 -1933658 - MLT1C LTR MaLR -12 455 213 2167 99 6 19 chr17 87571891 87572205 -1932348 - AluSx SINE Alu 0 312 3 2301 95 0 0 chr17 87573828 87574132 -1930421 - AluSx SINE Alu -8 304 1 281 212 50 0 chr17 87574135 87574234 -1930319 - L1ME4a LINE L1 0 6121 6018 400 288 103 20 chr17 87575079 87575225 -1929328 - L3 LINE CR1 -711 866 709 235 238 32 0 chr17 87575525 87575588 -1928965 + MIR SINE MIR 83 147 -115 1941 114 16 29 chr17 87579081 87579396 -1925157 + AluSx SINE Alu 1 311 -1 216 191 0 0 chr17 87580916 87580963 -1923590 + T-rich Low_complexity Low_complexity 1 47 0 266 241 23 11 chr17 87582578 87582665 -1921888 + LTR33 LTR ERVL 54 141 -380 321 222 198 0 chr17 87582798 87582924 -1921629 + LTR33 LTR ERVL 341 491 -30 23 33 0 0 chr17 87583569 87583599 -1920954 + GC_rich Low_complexity Low_complexity 1 30 0 216 191 0 0 chr17 87586248 87586295 -1918258 + T-rich Low_complexity Low_complexity 1 47 0 22 56 0 0 chr17 87589162 87589198 -1915355 + GC_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr17 87590037 87590066 -1914487 + GC_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr17 87590078 87590120 -1914433 + GC_rich Low_complexity Low_complexity 1 42 0 309 118 0 0 chr17 87590611 87590662 -1913891 + (CA)n Simple_repeat Simple_repeat 1 51 0 26 74 0 0 chr17 87592147 87592201 -1912352 + GC_rich Low_complexity Low_complexity 1 54 0 1367 137 4 32 chr17 87592668 87592916 -1911637 + AluSg SINE Alu 60 300 -10 1092 222 57 104 chr17 87593221 87593287 -1911266 - MLT1C LTR MaLR -1 466 398 2087 123 7 3 chr17 87593287 87593596 -1910957 + AluSx SINE Alu 1 310 -2 1092 222 57 104 chr17 87593596 87594002 -1910551 - MLT1C LTR MaLR -69 398 16 219 317 50 20 chr17 87594441 87594542 -1910011 + MIR3 SINE MIR 56 159 -49 1996 156 18 24 chr17 87594652 87594991 -1909562 - MER1B DNA MER1_type 0 337 1 575 248 90 60 chr17 87596245 87596613 -1907940 - MLT1D LTR MaLR 0 505 100 2389 78 0 0 chr17 87597197 87597504 -1907049 - AluY SINE Alu -4 307 1 2058 76 59 17 chr17 87597507 87597796 -1906757 - AluSx SINE Alu -11 301 1 1736 176 7 10 chr17 87598668 87598974 -1905579 - AluJo SINE Alu -7 305 1 2031 110 17 0 chr17 87598982 87599273 -1905280 - AluSg SINE Alu -14 296 1 2308 84 7 0 chr17 87599614 87599911 -1904642 + AluSx SINE Alu 1 299 -13 585 158 49 109 chr17 87600221 87600301 -1904252 + MLT1C LTR MaLR 8 91 -376 2357 81 10 3 chr17 87600301 87600611 -1903942 + AluSp SINE Alu 1 312 -1 585 158 49 109 chr17 87600611 87600714 -1903839 + MLT1C LTR MaLR 91 180 -287 2279 83 0 7 chr17 87600720 87601021 -1903532 + AluSc SINE Alu 1 299 -10 278 143 129 0 chr17 87601036 87601106 -1903447 + L1MB3 LINE L1 6105 6183 0 230 339 27 0 chr17 87601476 87601588 -1902965 + MLT1C LTR MaLR 251 365 -25 302 327 100 14 chr17 87602556 87602776 -1901777 + L2 LINE L2 2732 2970 -344 2159 79 4 0 chr17 87602784 87603064 -1901489 + AluY SINE Alu 5 285 -26 212 118 0 39 chr17 87604675 87604726 -1899827 + (TAAAAA)n Simple_repeat Simple_repeat 5 53 0 201 129 0 0 chr17 87605254 87605285 -1899268 + (CA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr17 87606469 87606493 -1898060 + GC_rich Low_complexity Low_complexity 1 24 0 201 231 0 0 chr17 87608049 87608088 -1896465 + C-rich Low_complexity Low_complexity 2 40 0 31 68 0 0 chr17 87612753 87612812 -1891741 + GC_rich Low_complexity Low_complexity 1 59 0 235 234 0 64 chr17 87614298 87614392 -1890161 + C-rich Low_complexity Low_complexity 6 93 0 180 0 0 0 chr17 87615571 87615591 -1888962 + (CTGGGG)n Simple_repeat Simple_repeat 2 21 0 568 266 62 11 chr17 87619423 87619600 -1884953 + L1MB3 LINE L1 5998 6183 0 2417 63 0 22 chr17 87619614 87619932 -1884621 + AluY SINE Alu 1 311 0 207 219 0 0 chr17 87624488 87624529 -1880024 + T-rich Low_complexity Low_complexity 1 41 0 1839 151 0 19 chr17 87624769 87625087 -1879466 - AluJb SINE Alu 0 312 1 302 313 31 0 chr17 87628273 87628401 -1876152 - L1MC4 LINE L1 -1197 6845 6714 800 171 8 0 chr17 87629016 87629145 -1875408 + FRAM SINE Alu 20 149 -27 210 222 0 0 chr17 87633008 87633053 -1871500 + C-rich Low_complexity Low_complexity 1 45 0 249 83 0 0 chr17 87637980 87638016 -1866537 + (GGA)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr17 87638374 87638395 -1866158 + GC_rich Low_complexity Low_complexity 1 21 0 180 177 0 113 chr17 87640143 87640205 -1864348 + L2 LINE L2 2955 3009 -263 251 250 0 0 chr17 87640649 87640721 -1863832 + CT-rich Low_complexity Low_complexity 1 72 0 198 143 0 0 chr17 87643317 87643352 -1861201 + (TG)n Simple_repeat Simple_repeat 1 35 0 2047 93 31 0 chr17 87646540 87646829 -1857724 + AluSq SINE Alu 1 298 -15 287 267 114 53 chr17 87647442 87647573 -1856980 - L2 LINE L2 -9 3263 3125 418 252 0 17 chr17 87648757 87648872 -1855681 + MLT1K LTR MaLR 148 260 -328 535 219 19 19 chr17 87648999 87649123 -1855430 - MER53 DNA DNA -34 155 29 1367 113 82 69 chr17 87649123 87649414 -1855139 - AluJo SINE Alu -17 295 1 535 219 19 19 chr17 87649414 87649444 -1855109 - MER53 DNA DNA -159 30 1 2295 65 0 7 chr17 87650905 87651197 -1853356 + AluY SINE Alu 1 290 -21 436 172 0 0 chr17 87652568 87652632 -1851921 + AluJ/FLAM SINE Alu 1 64 -248 437 244 11 33 chr17 87653005 87653185 -1851368 + (CCA)n Simple_repeat Simple_repeat 1 176 0 217 191 9 38 chr17 87653304 87653409 -1851144 + (CACCAT)n Simple_repeat Simple_repeat 4 105 0 2033 135 3 0 chr17 87655593 87655889 -1848664 + AluSx SINE Alu 1 297 -15 198 0 0 0 chr17 87658093 87658115 -1846438 + (A)n Simple_repeat Simple_repeat 1 22 0 666 118 0 0 chr17 87659071 87659173 -1845380 + (CA)n Simple_repeat Simple_repeat 2 103 0 230 247 11 0 chr17 87661307 87661400 -1843153 + (CA)n Simple_repeat Simple_repeat 2 95 0 396 262 2 0 chr17 87661412 87661849 -1842704 + (CA)n Simple_repeat Simple_repeat 1 438 0 303 264 0 0 chr17 87661907 87662036 -1842517 + (CA)n Simple_repeat Simple_repeat 2 130 0 244 270 81 0 chr17 87664879 87664990 -1839563 + MLT1E LTR MaLR 14 133 -460 373 221 0 67 chr17 87665156 87665260 -1839293 + MLT1F LTR MaLR 442 516 -26 22 35 0 0 chr17 87665688 87665717 -1838836 + AT_rich Low_complexity Low_complexity 1 29 0 528 111 0 0 chr17 87666429 87666528 -1838025 + (CAGG)n Simple_repeat Simple_repeat 2 100 0 1953 133 0 10 chr17 87668444 87668774 -1835779 - AluJb SINE Alu 0 312 1 243 0 0 0 chr17 87670106 87670133 -1834420 + (CA)n Simple_repeat Simple_repeat 1 27 0 202 204 23 0 chr17 87670561 87670605 -1833948 + C-rich Low_complexity Low_complexity 3 47 0 2327 70 0 0 chr17 87670720 87671018 -1833535 - AluY SINE Alu -13 298 1 909 102 47 0 chr17 87671020 87671148 -1833405 - AluSg SINE Alu -176 134 1 22 35 0 0 chr17 87672684 87672713 -1831840 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 87673797 87673825 -1830728 + GC_rich Low_complexity Low_complexity 1 28 0 213 195 61 12 chr17 87676533 87676615 -1827938 + (CCCCG)n Simple_repeat Simple_repeat 4 89 0 * 222 201 0 117 chr17 87676592 87676771 -1827782 + C-rich Low_complexity Low_complexity 4 161 0 2126 106 3 26 chr17 87678567 87678879 -1825674 + AluSp SINE Alu 1 305 -8 355 312 136 4 chr17 87679339 87679618 -1824935 + MLT1J1 LTR MaLR 5 320 -126 472 286 97 19 chr17 87680748 87681007 -1823546 + MLT1J1 LTR MaLR 19 297 -149 2102 136 3 0 chr17 87681339 87681640 -1822913 + AluSq SINE Alu 1 302 -11 6240 119 221 36 chr17 87681679 87683108 -1821445 - pTR5 LTR ERV1 -1 2437 744 1989 59 0 4 chr17 87683108 87683362 -1821191 + AluY SINE Alu 27 279 -32 225 0 0 0 chr17 87683363 87683388 -1821165 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 470 370 63 61 chr17 87683402 87684160 -1820393 + L1MEd LINE L1 884 1741 -749 2271 97 10 0 chr17 87684373 87684681 -1819872 + AluSq SINE Alu 1 311 -2 2279 95 13 0 chr17 87684757 87685061 -1819492 + AluSq SINE Alu 1 308 -5 2382 48 14 3 chr17 87685441 87685734 -1818819 + AluY SINE Alu 3 298 -13 262 210 0 16 chr17 87685734 87685796 -1818757 + MER81 DNA DNA 40 100 -14 622 307 28 31 chr17 87685812 87686170 -1818383 - L1MC/D LINE L1 -2037 5771 5415 479 182 0 154 chr17 87686156 87686194 -1818359 - L1ME1 LINE L1 -2 6164 6122 * 2012 128 3 16 chr17 87686194 87686507 -1818046 - AluSx SINE Alu -3 309 1 479 182 0 154 chr17 87686507 87686618 -1817935 - L1ME1 LINE L1 -44 6122 6046 915 154 0 0 chr17 87686618 87686761 -1817792 + FRAM SINE Alu 30 172 -4 672 219 83 61 chr17 87686762 87686990 -1817563 - L1ME1 LINE L1 -113 6053 5821 1227 244 60 8 chr17 87687236 87687615 -1816938 - L1M3 LINE L1 -407 5759 5353 2194 98 0 10 chr17 87687616 87687922 -1816631 + AluSx SINE Alu 1 303 -9 2426 46 0 17 chr17 87688028 87688330 -1816223 + AluY SINE Alu 1 297 -14 216 293 0 27 chr17 87689646 87689721 -1814832 + C-rich Low_complexity Low_complexity 6 78 0 633 267 115 7 chr17 87691705 87692042 -1812511 - MLT1C LTR MaLR -6 461 108 273 171 19 0 chr17 87693501 87693563 -1810990 - MIR SINE MIR -81 127 61 225 276 13 0 chr17 87696101 87696177 -1808376 + L1MC4 LINE L1 7817 7893 -149 1413 174 85 0 chr17 87696318 87696576 -1807977 + AluJo SINE Alu 6 285 -27 282 367 23 23 chr17 87696893 87697021 -1807532 - MIR SINE MIR -65 197 70 211 316 53 0 chr17 87699039 87699134 -1805419 - MIR SINE MIR -73 135 36 334 321 43 14 chr17 87700844 87700984 -1803569 - MIR SINE MIR -82 180 37 2329 103 0 0 chr17 87701191 87701503 -1803050 + AluSx SINE Alu 1 312 0 1414 264 30 26 chr17 87701513 87702010 -1802543 + L1MB5 LINE L1 5593 6091 -83 389 253 311 3 chr17 87702115 87702404 -1802149 + L2 LINE L2 2508 2885 -429 375 291 0 0 chr17 87702658 87702744 -1801809 - MIR SINE MIR -106 156 71 2274 101 3 0 chr17 87702849 87703155 -1801398 - AluSq SINE Alu -6 307 1 291 294 164 11 chr17 87704969 87705146 -1799407 + MIR SINE MIR 46 249 -13 273 257 14 0 chr17 87706359 87706433 -1798120 - MER45 DNA AcHobo 0 1581 1507 2162 97 28 0 chr17 87706434 87706724 -1797829 + AluSg SINE Alu 1 298 -12 314 209 173 0 chr17 87706726 87706836 -1797717 - MER45 DNA AcHobo -1450 131 3 243 0 0 0 chr17 87707318 87707345 -1797208 + (CTGGGG)n Simple_repeat Simple_repeat 3 29 0 2256 94 20 0 chr17 87711154 87711451 -1793102 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr17 87712553 87712577 -1791976 + AT_rich Low_complexity Low_complexity 1 24 0 1341 19 25 0 chr17 87712960 87713119 -1791434 + AluY SINE Alu 136 298 -13 293 213 0 0 chr17 87713119 87713180 -1791373 + MER81 DNA DNA 40 100 -14 643 304 28 31 chr17 87713196 87713554 -1790999 - L1MC/D LINE L1 -2037 5771 5415 479 195 0 154 chr17 87713540 87713578 -1790975 - L1ME1 LINE L1 -2 6164 6122 * 2007 124 3 19 chr17 87713578 87713892 -1790661 - AluSx SINE Alu -3 309 1 479 195 0 154 chr17 87713892 87714003 -1790550 - L1ME1 LINE L1 -44 6122 6046 915 154 0 0 chr17 87714003 87714146 -1790407 + FRAM SINE Alu 30 172 -4 672 219 83 61 chr17 87714147 87714375 -1790178 - L1ME1 LINE L1 -113 6053 5821 1380 229 47 9 chr17 87714621 87714961 -1789592 - L1ME1 LINE L1 -407 5759 5407 2255 92 0 7 chr17 87715003 87715308 -1789245 + AluSx SINE Alu 1 303 -9 2426 46 0 17 chr17 87715414 87715716 -1788837 + AluY SINE Alu 1 297 -14 21 36 0 0 chr17 87718561 87718589 -1785964 + GC_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr17 87718617 87718652 -1785901 + GC_rich Low_complexity Low_complexity 1 35 0 31 68 0 0 chr17 87718746 87718805 -1785748 + GC_rich Low_complexity Low_complexity 1 59 0 237 273 14 35 chr17 87720620 87720763 -1783790 + (CCCCG)n Simple_repeat Simple_repeat 5 144 0 284 240 136 13 chr17 87723079 87723233 -1781320 - L2 LINE L2 -329 2984 2812 240 226 83 36 chr17 87723307 87723391 -1781162 - L2 LINE L2 -661 2653 2566 977 207 0 0 chr17 87724718 87724882 -1779671 + FRAM SINE Alu 1 160 -16 1518 75 0 0 chr17 87725001 87725188 -1779365 - AluSg/x SINE Alu -14 298 112 2156 117 13 3 chr17 87725229 87725536 -1779017 - AluSx SINE Alu -2 310 1 1860 174 3 0 chr17 87726933 87727238 -1777315 + AluJb SINE Alu 1 306 -6 2115 106 3 3 chr17 87727572 87727874 -1776679 + AluSx SINE Alu 1 302 -10 258 326 0 37 chr17 87728188 87728323 -1776230 + L2 LINE L2 2966 3095 -177 2342 88 0 3 chr17 87729408 87729716 -1774837 - AluY SINE Alu -4 307 1 359 138 17 43 chr17 87730626 87730742 -1773811 + GA-rich Low_complexity Low_complexity 1 113 0 299 290 39 32 chr17 87731221 87731376 -1773177 + L1ME3 LINE L1 6005 6160 -2 513 276 81 8 chr17 87731856 87732100 -1772453 - L1MB8 LINE L1 -2 6182 5897 2051 44 0 0 chr17 87732124 87732372 -1772181 + AluY SINE Alu 1 248 -63 1788 157 7 0 chr17 87732846 87733133 -1771420 + AluJo SINE Alu 1 289 -23 390 129 0 0 chr17 87733169 87733231 -1771322 + (TTCA)n Simple_repeat Simple_repeat 2 63 0 1609 170 20 29 chr17 87734050 87734185 -1770368 + AluJb SINE Alu 1 136 -176 2111 115 3 0 chr17 87734185 87734489 -1770064 + AluSp SINE Alu 1 305 -8 1609 170 20 29 chr17 87734489 87734659 -1769894 + AluJb SINE Alu 136 303 -9 3967 189 16 46 chr17 87735591 87735880 -1768673 - L1MB8 LINE L1 -470 5713 5417 2193 115 3 0 chr17 87735880 87736184 -1768369 - AluSx SINE Alu -7 305 1 3967 189 16 46 chr17 87736184 87737384 -1767169 - L1MB8 LINE L1 -766 5417 4270 359 280 95 10 chr17 87737535 87737735 -1766818 - L1MB7 LINE L1 -15 6169 5953 2138 91 7 0 chr17 87739677 87739963 -1764590 - AluSg SINE Alu -22 288 1 1885 126 22 0 chr17 87739970 87740247 -1764306 - AluJo SINE Alu -15 297 15 868 159 9 65 chr17 87740565 87740674 -1763879 + Ricksha DNA DNA 2623 2714 -140 2270 83 3 0 chr17 87740674 87740974 -1763579 - AluY SINE Alu -8 303 3 868 159 9 65 chr17 87740974 87741096 -1763457 + Ricksha DNA DNA 2714 2841 -13 2132 85 0 54 chr17 87741975 87742292 -1762261 + AluSx SINE Alu 1 300 -12 1410 146 0 5 chr17 87742618 87742830 -1761723 + AluJo SINE Alu 86 296 -16 2083 97 28 0 chr17 87743127 87743290 -1761263 - AluSx SINE Alu -14 298 122 252 0 0 0 chr17 87743290 87743318 -1761235 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2083 97 28 0 chr17 87743318 87743444 -1761109 - AluSx SINE Alu -190 122 1 2023 107 21 0 chr17 87744379 87744659 -1759894 - AluSx SINE Alu -8 304 19 620 55 0 0 chr17 87744759 87744832 -1759721 - AluS SINE Alu -225 87 15 3817 193 50 24 chr17 87744832 87745493 -1759060 - Ricksha DNA DNA -1010 2236 1545 2145 118 3 0 chr17 87745493 87745790 -1758763 + AluSx SINE Alu 1 298 -14 3817 193 50 24 chr17 87745790 87746003 -1758550 - Ricksha DNA DNA -1701 1545 1339 677 177 81 11 chr17 87746411 87746597 -1757956 + MLT1C LTR MaLR 7 205 -262 180 200 0 0 chr17 87746597 87746637 -1757916 + (CA)n Simple_repeat Simple_repeat 2 41 0 362 270 6 0 chr17 87746655 87746833 -1757720 + (CA)n Simple_repeat Simple_repeat 2 180 0 465 257 0 0 chr17 87746864 87747043 -1757510 + (CA)n Simple_repeat Simple_repeat 2 180 0 255 255 0 0 chr17 87747098 87747204 -1757349 + (CA)n Simple_repeat Simple_repeat 2 107 0 252 280 0 40 chr17 87747204 87747304 -1757249 + MLT1C LTR MaLR 188 283 -184 1865 89 0 0 chr17 87747395 87747642 -1756911 - AluSg SINE Alu -63 247 1 1294 214 54 51 chr17 87747654 87748083 -1756470 - L1MB7 LINE L1 -9 6175 5746 264 190 17 0 chr17 87748083 87748141 -1756412 + MER96B DNA MER1_type? 336 394 -23 1977 113 0 7 chr17 87748914 87749198 -1755355 + AluSg SINE Alu 17 298 -12 2319 75 7 0 chr17 87749198 87749491 -1755062 + AluSc SINE Alu 1 297 -12 654 303 95 24 chr17 87749491 87749870 -1754683 + MLT1J LTR MaLR 106 511 0 863 142 0 8 chr17 87749997 87750131 -1754422 - FLAM_C SINE Alu 0 133 1 413 326 72 20 chr17 87750132 87750436 -1754117 - L1ME3A LINE L1 -293 5877 5558 384 213 43 0 chr17 87750457 87750551 -1754002 - MER58B DNA MER1_type 0 341 244 * 643 230 35 11 chr17 87750549 87750723 -1753830 - MER58A DNA MER1_type -46 178 1 247 249 131 6 chr17 87750725 87750897 -1753656 - L1ME3A LINE L1 -660 5502 5305 785 236 63 112 chr17 87750970 87751495 -1753058 - MLT1D LTR MaLR -5 500 2 239 250 57 34 chr17 87751706 87751794 -1752759 - MIR SINE MIR -77 185 96 28 0 0 0 chr17 87753015 87753043 -1751510 + GC_rich Low_complexity Low_complexity 1 28 0 2254 63 26 7 chr17 87754098 87754401 -1750152 - AluSq SINE Alu -4 309 1 1469 143 56 28 chr17 87754404 87754690 -1749863 - AluJo SINE Alu -18 294 1 435 207 24 0 chr17 87755424 87755506 -1749047 - FRAM/FAM SINE Alu -92 84 1 494 360 23 0 chr17 87755578 87755839 -1748714 - L1M4 LINE L1 -3020 3126 2860 383 286 48 0 chr17 87755840 87755987 -1748566 - L1M4 LINE L1 -3317 2829 2676 947 76 0 0 chr17 87755987 87756106 -1748447 - AluSq/x SINE Alu -193 119 1 1626 87 0 26 chr17 87756366 87756595 -1747958 + AluSq SINE Alu 87 309 -4 214 322 96 17 chr17 87756606 87756721 -1747832 - MIR SINE MIR -67 141 18 2242 100 3 13 chr17 87757483 87757792 -1746761 + AluSx SINE Alu 1 306 -6 2232 114 0 0 chr17 87758738 87759045 -1745508 + AluSx SINE Alu 1 307 -5 279 79 0 0 chr17 87759047 87759085 -1745468 + (GGGAGA)n Simple_repeat Simple_repeat 5 42 0 195 100 0 0 chr17 87759598 87759628 -1744925 + (A)n Simple_repeat Simple_repeat 1 30 0 201 121 0 0 chr17 87760480 87760513 -1744040 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 2104 104 0 32 chr17 87760890 87761198 -1743355 - AluSc SINE Alu -11 298 1 1562 176 23 16 chr17 87761201 87761507 -1743046 - AluJo SINE Alu -4 308 1 251 261 0 0 chr17 87761587 87761652 -1742901 + C-rich Low_complexity Low_complexity 4 68 0 2259 114 0 0 chr17 87761769 87762076 -1742477 - AluSg SINE Alu -3 307 1 217 129 0 59 chr17 87762276 87762361 -1742192 + (CGGTG)n Simple_repeat Simple_repeat 5 84 0 397 306 190 11 chr17 87762393 87762677 -1741876 - HAL1 LINE L1 -1557 950 616 424 88 0 0 chr17 87763996 87764053 -1740500 + Alu SINE Alu 238 294 -16 194 153 17 0 chr17 87764053 87764112 -1740441 + (TA)n Simple_repeat Simple_repeat 1 60 0 304 236 47 28 chr17 87764118 87764224 -1740329 - L1ME3A LINE L1 -13 6157 6050 253 239 22 54 chr17 87764580 87764672 -1739881 - L1ME3A LINE L1 -846 5513 5425 * 1652 257 52 29 chr17 87764666 87764680 -1739873 - L1ME1 LINE L1 -10 6334 6322 2056 125 0 20 chr17 87764680 87764985 -1739568 - AluSx SINE Alu -13 299 1 1652 257 52 29 chr17 87764985 87765161 -1739392 - L1ME1 LINE L1 -22 6322 6152 2224 98 0 3 chr17 87765161 87765458 -1739095 - AluSc SINE Alu -13 296 1 1652 257 52 29 chr17 87765458 87765982 -1738571 - L1ME1 LINE L1 -192 6152 5585 2175 84 0 3 chr17 87767767 87768073 -1736480 - AluSg SINE Alu 0 305 1 849 153 0 0 chr17 87770811 87770942 -1733611 - AluJb SINE Alu -16 296 166 2121 98 3 22 chr17 87772519 87772834 -1731719 + AluSg SINE Alu 1 309 -1 598 224 113 70 chr17 87773078 87773431 -1731122 - L1MC4 LINE L1 -961 7065 6649 397 159 48 16 chr17 87773435 87773686 -1730867 + (TG)n Simple_repeat Simple_repeat 1 259 0 425 238 65 0 chr17 87773718 87773886 -1730667 + (TG)n Simple_repeat Simple_repeat 1 179 0 181 209 70 0 chr17 87773908 87774066 -1730487 + (TG)n Simple_repeat Simple_repeat 2 170 0 1978 100 6 35 chr17 87774885 87775222 -1729331 - AluSq SINE Alu 0 313 6 759 211 70 14 chr17 87776935 87777148 -1727405 + MLT1C LTR MaLR 7 231 -236 2018 134 0 3 chr17 87777289 87777587 -1726966 + AluSx SINE Alu 2 298 -14 205 161 32 48 chr17 87782043 87782105 -1722448 + (CCCCAG)n Simple_repeat Simple_repeat 1 61 0 724 196 141 7 chr17 87783026 87783256 -1721297 - MLT1C LTR MaLR -198 269 1 285 289 94 16 chr17 87783369 87783497 -1721056 - MIR SINE MIR -79 183 46 195 317 33 0 chr17 87785207 87785267 -1719286 - MIR SINE MIR -66 142 81 182 265 82 0 chr17 87785887 87785936 -1718617 - MIR SINE MIR -102 160 108 3466 193 35 32 chr17 87786943 87786989 -1717564 - L1 LINE L1 -1903 4243 4199 2399 71 0 0 chr17 87786989 87787285 -1717268 - AluY SINE Alu -14 297 2 3466 193 35 32 chr17 87787285 87787304 -1717249 - L1 LINE L1 -1947 4199 4182 2301 96 0 3 chr17 87787304 87787607 -1716946 - AluSx SINE Alu -10 302 1 3466 193 35 32 chr17 87787607 87788391 -1716162 - L1 LINE L1 -1964 4182 3390 1838 82 67 15 chr17 87789166 87789458 -1715095 - AluSx SINE Alu 0 306 1 1180 264 81 8 chr17 87789770 87790152 -1714401 + L1MB5 LINE L1 5765 6174 0 2380 64 0 3 chr17 87790162 87790457 -1714096 + AluY SINE Alu 1 294 -17 198 0 0 0 chr17 87792178 87792200 -1712353 + (T)n Simple_repeat Simple_repeat 1 22 0 2109 47 0 4 chr17 87792200 87792455 -1712098 - AluY SINE Alu -56 255 2 2200 102 3 0 chr17 87792466 87792761 -1711792 - AluSp SINE Alu -17 296 1 640 209 96 40 chr17 87793738 87793915 -1710638 + MIR SINE MIR 14 200 -62 1890 163 3 7 chr17 87795331 87795637 -1708916 - AluJo SINE Alu -7 305 1 557 176 83 0 chr17 87795652 87795760 -1708793 - AluJb SINE Alu -26 286 170 375 283 145 34 chr17 87796583 87796990 -1707563 + MLT1C LTR MaLR 1 452 -15 270 229 0 0 chr17 87798474 87798544 -1706009 + C-rich Low_complexity Low_complexity 1 70 0 591 131 0 0 chr17 87799723 87799807 -1704746 + AluSc SINE Alu 1 84 -225 2250 85 7 0 chr17 87799807 87800102 -1704451 + AluSc SINE Alu 2 298 -11 242 209 90 0 chr17 87801100 87801167 -1703386 + MER77 LTR ERV1 119 191 -414 2092 140 0 6 chr17 87801167 87801481 -1703072 + AluJo SINE Alu 1 312 0 249 152 45 125 chr17 87801484 87801549 -1703004 + L1MC3 LINE L1 5325 5379 -2429 2334 85 3 25 chr17 87801549 87801868 -1702685 + AluSx SINE Alu 1 312 0 249 152 45 125 chr17 87801868 87801914 -1702639 + L1MC3 LINE L1 5379 5427 -2381 2974 183 166 100 chr17 87802154 87802794 -1701759 + L1MC3 LINE L1 6362 6958 -827 2192 112 3 0 chr17 87802794 87803090 -1701463 + AluSx SINE Alu 1 297 -15 2974 183 166 100 chr17 87803090 87803138 -1701415 + L1MC3 LINE L1 6958 7001 -784 263 284 0 11 chr17 87803138 87803226 -1701327 + MLT1F1 LTR MaLR 24 110 -457 2974 183 166 100 chr17 87803226 87803784 -1700769 + L1MC3 LINE L1 7001 7785 0 244 75 25 0 chr17 87803798 87803838 -1700715 + Alu SINE Alu 10 50 -250 1532 160 93 0 chr17 87808837 87809106 -1695447 + AluJb SINE Alu 1 294 -18 1775 122 50 0 chr17 87810048 87810326 -1694227 - AluSx SINE Alu -20 292 1 2039 122 7 0 chr17 87811294 87811582 -1692971 + AluSx SINE Alu 1 290 -22 436 246 0 27 chr17 87811934 87812117 -1692436 + (ATGGTG)n Simple_repeat Simple_repeat 1 178 0 902 157 8 17 chr17 87812136 87812493 -1692060 + (ATGGTG)n Simple_repeat Simple_repeat 1 354 0 23 0 0 0 chr17 87814110 87814133 -1690420 + GC_rich Low_complexity Low_complexity 1 23 0 223 118 11 75 chr17 87816468 87816561 -1687992 + (TCC)n Simple_repeat Simple_repeat 2 88 0 1772 133 3 48 chr17 87816661 87816977 -1687576 - AluJo SINE Alu -8 304 3 2290 70 0 17 chr17 87820259 87820558 -1683995 - AluY SINE Alu -17 294 1 248 216 39 39 chr17 87820622 87820724 -1683829 + G-rich Low_complexity Low_complexity 2 103 0 530 260 115 24 chr17 87821491 87821781 -1682772 + MSTD LTR MaLR 1 393 -3 213 159 0 0 chr17 87821845 87821889 -1682664 + C-rich Low_complexity Low_complexity 1 44 0 1652 172 28 21 chr17 87823842 87824133 -1680420 - AluJb SINE Alu -18 294 2 613 278 66 0 chr17 87825907 87826119 -1678434 - MER67B LTR ERV1 -301 360 135 180 259 74 0 chr17 87828376 87828430 -1676123 + MER5A DNA MER1_type 77 134 -55 1836 150 77 60 chr17 87829111 87829577 -1674976 - LTR19A LTR ERV1 -12 474 1 366 276 0 0 chr17 87832563 87832726 -1671827 + (TG)n Simple_repeat Simple_repeat 2 164 0 225 210 0 0 chr17 87832787 87832849 -1671704 + (TG)n Simple_repeat Simple_repeat 1 62 0 189 268 42 14 chr17 87833663 87833734 -1670819 + L2 LINE L2 3005 3077 -195 402 318 73 20 chr17 87835761 87836006 -1668547 - L1M4 LINE L1 -2579 3567 3310 913 226 70 53 chr17 87836147 87836348 -1668205 - L1M4 LINE L1 -2848 3298 3102 2184 96 3 16 chr17 87836348 87836660 -1667893 - AluSg SINE Alu -2 308 1 913 226 70 53 chr17 87836660 87836927 -1667626 - L1M4 LINE L1 -3044 3102 2822 802 138 101 75 chr17 87836944 87837103 -1667450 + AluJo SINE Alu 87 249 -63 938 193 144 21 chr17 87837103 87837346 -1667207 - AluJo SINE Alu -39 273 1 343 153 82 24 chr17 87837353 87837438 -1667115 - L1M4 LINE L1 -3364 2782 2693 2930 234 62 17 chr17 87837442 87838451 -1666102 + L1ME LINE L1 3690 4744 -1402 849 167 7 0 chr17 87838454 87838592 -1665961 + FLAM_C SINE Alu 1 139 -4 2387 55 0 3 chr17 87838614 87838941 -1665612 + AluY SINE Alu 1 326 0 386 235 29 10 chr17 87838949 87839051 -1665502 + L1ME LINE L1 5483 5586 -576 2005 121 7 0 chr17 87839057 87839339 -1665214 + AluSx SINE Alu 9 292 -20 217 231 0 0 chr17 87847037 87847089 -1657464 + (CAG)n Simple_repeat Simple_repeat 1 52 0 280 314 52 13 chr17 87852277 87852430 -1652123 - L1MC/D LINE L1 -2074 6128 5970 272 286 45 0 chr17 87852525 87852637 -1651916 - L1MC/D LINE L1 -766 5792 5676 1919 90 76 0 chr17 87852644 87852921 -1651632 - AluSq SINE Alu -15 298 1 298 276 120 26 chr17 87852922 87853114 -1651439 - L1ME3 LINE L1 -54 6108 5899 1675 116 4 25 chr17 87853151 87853392 -1651161 - AluSx SINE Alu -76 236 1 726 290 97 11 chr17 87853414 87853923 -1650630 - L1MDa LINE L1 -3568 2972 2421 1223 106 0 11 chr17 87854053 87854232 -1650321 + AluSg/x SINE Alu 136 312 0 318 365 65 56 chr17 87854540 87854970 -1649583 - L1MDa LINE L1 -5635 895 462 318 148 0 0 chr17 87855112 87855166 -1649387 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 556 308 56 107 chr17 87855261 87855813 -1648740 - L1M4 LINE L1 -1082 5064 4541 2509 68 0 0 chr17 87855975 87856286 -1648267 - AluY SINE Alu 0 311 1 2265 88 0 10 chr17 87857219 87857526 -1647027 - AluSx SINE Alu -8 304 1 389 218 0 0 chr17 88260097 88260175 -1244378 - L1M4 LINE L1 -527 5657 5580 2323 87 0 6 chr17 88260654 88260966 -1243587 + AluSg SINE Alu 1 310 0 226 275 0 69 chr17 88261068 88261257 -1243296 + C-rich Low_complexity Low_complexity 4 179 0 304 263 0 58 chr17 88261321 88261492 -1243061 + C-rich Low_complexity Low_complexity 3 163 0 613 260 81 37 chr17 88261595 88261918 -1242635 + L1ME3A LINE L1 5569 5905 -265 2365 91 0 0 chr17 88261919 88262227 -1242326 + AluSx SINE Alu 1 308 -4 985 248 71 36 chr17 88262355 88262366 -1242187 + HAL1b LINE L1 238 247 -1101 1902 138 7 14 chr17 88262366 88262662 -1241891 + AluSx SINE Alu 1 294 -18 210 71 0 0 chr17 88262663 88262691 -1241862 + (CA)n Simple_repeat Simple_repeat 2 29 0 985 248 71 36 chr17 88262691 88263125 -1241428 + HAL1b LINE L1 246 701 -647 1431 129 0 19 chr17 88263225 88263435 -1241118 - AluSg SINE Alu -104 206 1 631 290 132 15 chr17 88263823 88264164 -1240389 + HAL1 LINE L1 1333 1713 -794 417 132 79 0 chr17 88264279 88264355 -1240198 + AluS SINE Alu 6 87 -225 2026 113 3 3 chr17 88264880 88265162 -1239391 + AluSx SINE Alu 1 282 -30 548 276 76 63 chr17 88265909 88266025 -1238528 - L1ME LINE L1 -465 5699 5586 1959 142 3 3 chr17 88266025 88266321 -1238232 + AluSx SINE Alu 1 296 -16 548 276 76 63 chr17 88266321 88266519 -1238034 - L1ME LINE L1 -578 5586 5381 * 1338 266 82 0 chr17 88266498 88266976 -1237577 - L1ME LINE L1 -3371 2775 2259 824 213 0 60 chr17 88266976 88267016 -1237537 - AluJo/FRAM SINE Alu -4 308 267 2293 92 0 3 chr17 88267016 88267321 -1237232 + AluSx SINE Alu 1 304 -8 824 213 0 60 chr17 88267321 88267463 -1237090 - AluJo/FRAM SINE Alu -45 267 137 2108 104 0 0 chr17 88267922 88268201 -1236352 + AluSx SINE Alu 1 279 -33 263 264 164 36 chr17 88268210 88268350 -1236203 - MER5A DNA MER1_type -1 188 31 2205 89 13 16 chr17 88270004 88270317 -1234236 - AluSx SINE Alu 0 312 1 2643 159 89 80 chr17 88270317 88270433 -1234120 - LTR8A LTR ERV1 -9 718 604 1848 90 62 31 chr17 88270433 88270721 -1233832 - AluY SINE Alu -14 297 1 2643 159 89 80 chr17 88270721 88271314 -1233239 - LTR8A LTR ERV1 -123 604 3 1353 142 84 9 chr17 88271470 88271766 -1232787 - MER4B LTR ERV1 0 707 319 619 149 11 0 chr17 88271876 88271970 -1232583 + AluJo SINE Alu 58 152 -160 1764 176 3 0 chr17 88272061 88272350 -1232203 - AluJo SINE Alu -22 290 1 1271 223 61 33 chr17 88273406 88273728 -1230825 - MLT1C LTR MaLR -56 411 99 2257 94 0 23 chr17 88273728 88274037 -1230516 + AluSx SINE Alu 1 302 -10 2403 93 0 0 chr17 88274037 88274347 -1230206 + AluSg SINE Alu 1 310 0 1271 223 61 33 chr17 88274347 88274418 -1230135 - MLT1C LTR MaLR -367 100 6 503 221 0 41 chr17 88274951 88275073 -1229480 + AluSg/x SINE Alu 183 299 -11 22 88 0 0 chr17 88275291 88275348 -1229205 + AT_rich Low_complexity Low_complexity 1 57 0 2152 123 7 0 chr17 88275392 88275702 -1228851 + AluSx SINE Alu 1 312 0 1878 129 4 4 chr17 88277196 88277468 -1227085 + AluSx SINE Alu 1 272 -40 2098 231 60 49 chr17 88277569 88277853 -1226700 + L1ME1 LINE L1 4699 4978 -1188 2114 110 0 0 chr17 88277853 88278167 -1226386 + AluSg SINE Alu 1 314 0 2098 231 60 49 chr17 88278167 88278496 -1226057 + L1ME1 LINE L1 4978 5302 -864 1539 164 9 61 chr17 88278496 88278825 -1225728 + AluJo SINE Alu 1 312 0 2098 231 60 49 chr17 88278825 88278925 -1225628 + L1ME1 LINE L1 5302 5399 -767 2423 76 0 0 chr17 88278925 88279227 -1225326 + AluSx SINE Alu 1 302 -10 2098 231 60 49 chr17 88279227 88279671 -1224882 + L1ME1 LINE L1 5399 5898 -268 414 205 86 0 chr17 88279697 88279814 -1224739 + L1ME1 LINE L1 5977 6103 -63 2091 107 3 3 chr17 88279820 88280109 -1224444 + AluSq SINE Alu 1 289 -24 2091 101 3 10 chr17 88280215 88280522 -1224031 + AluSg SINE Alu 1 305 -5 2327 84 0 10 chr17 88280534 88280832 -1223721 + AluSx SINE Alu 1 295 -17 2209 105 3 3 chr17 88281570 88281876 -1222677 + AluSg1 SINE Alu 1 306 -3 181 319 0 0 chr17 88282746 88282793 -1221760 + MIR SINE MIR 77 123 -85 2179 87 17 3 chr17 88283049 88283347 -1221206 + AluSx SINE Alu 1 302 -10 397 336 51 20 chr17 88284373 88284626 -1219927 + L1M4 LINE L1 5081 5341 -805 781 158 0 0 chr17 88284636 88284763 -1219790 - AluSg/x SINE Alu 0 312 186 1231 78 0 18 chr17 88284863 88285029 -1219524 - AluSq SINE Alu -150 163 1 2734 241 49 30 chr17 88285033 88285435 -1219118 + L1ME1 LINE L1 5176 5569 -597 2443 60 0 3 chr17 88285435 88285737 -1218816 - AluY SINE Alu -10 301 1 2734 241 49 30 chr17 88285737 88286051 -1218502 + L1ME1 LINE L1 5569 5919 -247 8256 50 1 0 chr17 88286051 88287019 -1217534 + LTR5 LTR ERVK 1 969 0 2734 241 49 30 chr17 88287019 88287272 -1217281 + L1ME1 LINE L1 5919 6166 0 453 285 104 30 chr17 88287701 88287917 -1216636 + MIR SINE MIR 1 225 -37 1226 79 0 12 chr17 88288819 88288983 -1215570 + AluSg/x SINE Alu 147 308 -4 5406 171 49 69 chr17 88290031 88291503 -1213050 + MER52A LTR ERV1 9 1755 0 2260 104 0 0 chr17 88291589 88291887 -1212666 + AluSx SINE Alu 1 298 -14 1905 102 30 0 chr17 88293842 88294106 -1210447 + AluSx SINE Alu 24 295 -17 688 255 102 71 chr17 88294122 88294416 -1210137 + MLT1G LTR MaLR 86 394 -167 684 110 195 0 chr17 88294551 88294669 -1209884 + AluSg SINE Alu 1 141 -169 2159 58 19 16 chr17 88294670 88294979 -1209574 + AluY SINE Alu 1 310 -1 213 351 0 0 chr17 88295016 88295090 -1209463 + (CGTG)n Simple_repeat Simple_repeat 2 75 0 180 0 0 0 chr17 88295510 88295530 -1209023 + (CCCCG)n Simple_repeat Simple_repeat 2 21 0 2218 85 3 3 chr17 88296203 88296498 -1208055 + AluSq SINE Alu 1 295 -18 1533 141 3 60 chr17 88297206 88297295 -1207258 + AluSx SINE Alu 24 116 -196 2081 68 54 0 chr17 88297295 88297573 -1206980 - AluY SINE Alu -17 294 2 1533 141 3 60 chr17 88297573 88297766 -1206787 + AluSx SINE Alu 116 290 -22 212 208 0 26 chr17 88298630 88298707 -1205846 + (CAGAGA)n Simple_repeat Simple_repeat 4 78 0 282 56 0 0 chr17 88298862 88298898 -1205655 + (TA)n Simple_repeat Simple_repeat 2 37 0 2033 133 0 17 chr17 88298898 88299198 -1205355 - AluSx SINE Alu -17 295 1 1794 133 51 14 chr17 88299235 88299406 -1205147 - AluSx SINE Alu -8 304 116 2442 66 0 0 chr17 88299406 88299707 -1204846 - AluY SINE Alu -10 301 1 1794 133 51 14 chr17 88299707 88299828 -1204725 - AluSx SINE Alu -196 116 1 1925 149 7 3 chr17 88299844 88300146 -1204407 - AluSg SINE Alu -2 308 6 1223 187 172 23 chr17 88300298 88300560 -1203993 + AluJb SINE Alu 2 302 0 234 322 110 0 chr17 88301398 88301598 -1202955 - L2 LINE L2 -227 3086 2858 529 188 45 9 chr17 88301668 88301780 -1202773 - L1MB7 LINE L1 -19 6165 6050 2281 101 10 0 chr17 88301780 88302088 -1202465 - AluSp SINE Alu 0 313 3 1068 77 0 0 chr17 88302096 88302226 -1202327 - AluSp SINE Alu -183 130 1 1138 97 12 12 chr17 88302343 88302508 -1202045 + AluSq SINE Alu 129 293 -20 2059 146 0 0 chr17 88302508 88302816 -1201737 - AluSg SINE Alu -2 308 1 808 236 105 23 chr17 88302822 88303091 -1201462 - L1MEc LINE L1 -3034 3181 2877 2226 113 0 0 chr17 88303091 88303392 -1201161 - AluSc SINE Alu -8 301 1 808 236 105 23 chr17 88303392 88303466 -1201087 - L1MEc LINE L1 -3338 2877 2810 535 233 76 23 chr17 88303481 88303653 -1200900 - MLT1B LTR MaLR -209 181 1 840 238 114 29 chr17 88303660 88303832 -1200721 - L1MEc LINE L1 -3620 2595 2439 2059 123 7 3 chr17 88303832 88304141 -1200412 - AluSq SINE Alu -3 310 1 840 238 114 29 chr17 88304141 88304494 -1200059 - L1MEc LINE L1 -3776 2439 2053 2111 116 3 3 chr17 88305075 88305377 -1199176 + AluSx SINE Alu 1 302 -10 2238 105 0 6 chr17 88305467 88305780 -1198773 + AluSx SINE Alu 1 311 -1 235 239 14 14 chr17 88305817 88305888 -1198665 - LTR37B LTR ERV1 -181 287 217 507 206 0 101 chr17 88306466 88306665 -1197888 + C-rich Low_complexity Low_complexity 2 180 0 279 177 13 70 chr17 88306682 88306840 -1197713 + C-rich Low_complexity Low_complexity 2 150 0 2184 78 7 3 chr17 88307275 88307566 -1196987 + AluSq SINE Alu 1 292 -21 2461 54 3 22 chr17 88307566 88307882 -1196671 + AluY SINE Alu 1 310 -1 404 269 54 30 chr17 88308083 88308250 -1196303 + MLT1K LTR MaLR 401 571 -17 1373 200 70 3 chr17 88308727 88309057 -1195496 - MLT1A1 LTR MaLR -3 362 11 2158 118 7 0 chr17 88309836 88310140 -1194413 - AluSx SINE Alu -6 306 1 2376 56 0 0 chr17 88310152 88310465 -1194088 - AluSg SINE Alu 0 313 1 219 152 0 0 chr17 88311306 88311352 -1193201 + T-rich Low_complexity Low_complexity 2 47 0 2420 50 3 3 chr17 88312098 88312395 -1192158 - AluY SINE Alu -8 303 7 2273 57 14 3 chr17 88312476 88312796 -1191757 - AluY SINE Alu 0 323 1 331 339 27 59 chr17 88313812 88313998 -1190555 - L1ME4a LINE L1 -77 6044 5865 2207 103 30 0 chr17 88314005 88314306 -1190247 + AluSg SINE Alu 1 310 0 2153 213 50 78 chr17 88314951 88315805 -1188748 + L1M4 LINE L1 3806 4635 -1511 565 221 75 65 chr17 88316079 88316278 -1188275 - MLT2B3 LTR ERVL -8 546 346 275 210 16 0 chr17 88316280 88316342 -1188211 - Ricksha DNA DNA -1624 422 360 277 340 12 6 chr17 88316677 88316839 -1187714 + C-rich Low_complexity Low_complexity 4 166 0 2244 70 0 20 chr17 88317611 88317909 -1186644 + AluSg SINE Alu 1 292 -18 379 129 40 10 chr17 88318025 88318126 -1186427 + (TG)n Simple_repeat Simple_repeat 2 105 0 548 95 61 7 chr17 88318233 88318380 -1186173 + (TG)n Simple_repeat Simple_repeat 2 156 0 2111 120 0 3 chr17 88319655 88319956 -1184597 + AluSx SINE Alu 2 301 -11 2187 88 3 7 chr17 88320065 88320362 -1184191 + AluSx SINE Alu 1 296 -16 2118 106 0 0 chr17 88321260 88321570 -1182983 - AluSq SINE Alu 0 310 1 2343 93 0 0 chr17 88321673 88321984 -1182569 - AluY SINE Alu 0 311 1 2262 91 3 3 chr17 88321986 88322316 -1182237 - AluSp SINE Alu 0 313 1 2050 90 0 0 chr17 88322317 88322584 -1181969 - AluSq SINE Alu -13 300 34 513 275 0 0 chr17 88323684 88323851 -1180702 + (TG)n Simple_repeat Simple_repeat 1 167 0 29 0 0 0 chr17 88324172 88324201 -1180352 + AT_rich Low_complexity Low_complexity 1 29 0 1916 155 0 3 chr17 88324206 88324502 -1180051 + AluJb SINE Alu 11 305 -7 2311 103 6 0 chr17 88324509 88324820 -1179733 + AluSp SINE Alu 1 313 0 305 400 24 18 chr17 88324831 88324996 -1179557 + L1MC/D LINE L1 5430 5595 -2213 2210 95 0 14 chr17 88325002 88325297 -1179256 - AluY SINE Alu -20 291 1 1811 155 0 13 chr17 88325314 88325618 -1178935 - AluJo SINE Alu -12 300 1 742 159 16 0 chr17 88325628 88325754 -1178799 - AluSg/x SINE Alu -2 310 183 2303 89 0 19 chr17 88326001 88326314 -1178239 + AluSq SINE Alu 1 307 -6 1780 156 11 0 chr17 88328222 88328497 -1176056 - AluJo SINE Alu -12 300 23 2092 112 3 0 chr17 88328598 88328885 -1175668 - AluSg SINE Alu -22 288 1 776 235 15 15 chr17 88328925 88329125 -1175428 + AluJb SINE Alu 102 301 -11 2175 81 32 0 chr17 88329278 88329562 -1174991 - AluSp SINE Alu -20 293 1 373 239 22 39 chr17 88331639 88331819 -1172734 + C-rich Low_complexity Low_complexity 4 180 0 25 51 0 0 chr17 88332015 88332054 -1172499 + GC_rich Low_complexity Low_complexity 1 39 0 195 271 0 0 chr17 88332686 88332756 -1171797 + (TG)n Simple_repeat Simple_repeat 1 70 0 300 345 0 0 chr17 88332776 88332889 -1171664 + (TG)n Simple_repeat Simple_repeat 2 114 0 416 349 0 6 chr17 88332912 88333087 -1171466 + (TG)n Simple_repeat Simple_repeat 1 174 0 1697 127 83 0 chr17 88333523 88333776 -1170777 - AluSx SINE Alu -16 296 23 226 255 78 39 chr17 88334528 88334630 -1169923 - L3 LINE CR1 -166 1411 1306 2112 137 0 0 chr17 88334715 88335014 -1169539 + AluSx SINE Alu 1 299 -13 2222 62 21 3 chr17 88335014 88335302 -1169251 + AluY SINE Alu 1 293 -18 456 199 75 27 chr17 88335379 88335525 -1169028 + MLT1C LTR MaLR 6 158 -309 259 259 0 0 chr17 88335524 88335582 -1168971 - Charlie1 DNA MER1_type -2703 58 1 * 462 229 64 0 chr17 88336652 88336761 -1167792 - MER5A DNA MER1_type -70 119 4 343 306 25 0 chr17 88337061 88337221 -1167332 + (CCCCAA)n Simple_repeat Simple_repeat 1 164 0 * 416 280 28 13 chr17 88337172 88337463 -1167090 + C-rich Low_complexity Low_complexity 1 295 0 311 256 23 0 chr17 88338664 88338750 -1165803 - MLT1A2 LTR MaLR -283 91 4 355 306 74 8 chr17 88338975 88339178 -1165375 - MER20 DNA MER1_type -1 218 1 188 349 48 0 chr17 88339460 88339543 -1165010 - MIR SINE MIR -66 196 110 2202 114 0 0 chr17 88339623 88339929 -1164624 - AluSx SINE Alu -6 306 1 1452 227 42 0 chr17 88339937 88340298 -1164255 - L1MB3 LINE L1 -1 6182 5807 647 317 79 56 chr17 88340435 88340598 -1163955 - L1MEc LINE L1 -1214 5001 4843 2071 108 44 0 chr17 88340598 88340895 -1163658 - AluSx SINE Alu -2 310 1 647 317 79 56 chr17 88340895 88341301 -1163252 - L1MEc LINE L1 -1372 4843 1956 849 244 102 12 chr17 88341347 88341671 -1162882 - L1MB7 LINE L1 -9 6175 5823 937 125 0 0 chr17 88341675 88341811 -1162742 - AluSg/x SINE Alu -6 306 171 710 85 11 0 chr17 88342350 88342444 -1162109 + AluS SINE Alu 2 96 -217 849 200 0 24 chr17 88342643 88342813 -1161740 - FRAM SINE Alu 0 166 1 2984 114 12 5 chr17 88342839 88343267 -1161286 - L1PA8 LINE L1 -3 6169 5739 2262 84 0 10 chr17 88343482 88343781 -1160772 + AluSq SINE Alu 1 296 -17 1952 105 0 0 chr17 88343915 88344173 -1160380 + AluSx SINE Alu 22 279 -33 263 264 164 36 chr17 88344182 88344322 -1160231 - MER5A DNA MER1_type -1 188 31 1331 157 120 15 chr17 88346651 88346918 -1157635 - AluJo SINE Alu -17 295 1 269 239 0 45 chr17 88347274 88347362 -1157191 + CT-rich Low_complexity Low_complexity 4 87 0 2357 240 39 0 chr17 88347488 88348026 -1156527 - MER68 LTR ERV1 0 562 4 1333 99 16 0 chr17 88348312 88348504 -1156049 + AluY SINE Alu 104 298 -13 591 104 0 0 chr17 88348504 88348581 -1155972 - AluS SINE Alu -235 77 1 573 240 41 0 chr17 88349572 88349718 -1154835 - MLT1E LTR MaLR 0 593 442 492 254 169 10 chr17 88349746 88349947 -1154606 - MLT1E LTR MaLR -280 313 81 223 162 0 0 chr17 88350031 88350068 -1154485 - L2 LINE L2 -16 3256 3220 2217 113 0 0 chr17 88350128 88350429 -1154124 + AluSx SINE Alu 1 301 -11 378 269 114 23 chr17 88350471 88350646 -1153907 - MIR SINE MIR -57 205 15 2360 80 3 0 chr17 88350851 88351150 -1153403 + AluSp SINE Alu 1 300 -13 1920 95 9 104 chr17 88351267 88351603 -1152950 + AluSp SINE Alu 1 304 -9 1367 128 0 0 chr17 88351759 88351946 -1152607 - AluSx SINE Alu -125 187 1 515 150 0 0 chr17 88351946 88352026 -1152527 + AluJ/FRAM SINE Alu 221 300 -12 1128 54 0 0 chr17 88352035 88352182 -1152371 + AluY SINE Alu 165 311 0 2367 76 0 16 chr17 88353942 88354257 -1150296 - AluY SINE Alu -1 310 1 4940 62 11 9 chr17 88354273 88354916 -1149637 - SVA Other Other 0 1386 743 346 292 78 39 chr17 88354927 88355081 -1149472 - L1ME LINE L1 -354 5767 5608 1718 25 0 0 chr17 88355933 88356130 -1148423 + L1PA3 LINE L1 5956 6152 -3 2231 95 0 7 chr17 88356164 88356459 -1148094 + AluSx SINE Alu 2 294 -18 1013 141 7 0 chr17 88356496 88356645 -1147908 + AluJb SINE Alu 141 290 -22 8188 51 21 3 chr17 88357523 88358512 -1146041 - LTR13 LTR ERVK 0 1007 1 1216 173 0 30 chr17 88358681 88358912 -1145641 - AluJo SINE Alu -4 308 85 1912 98 0 4 chr17 88358938 88359193 -1145360 - AluSx SINE Alu -58 254 1 1766 127 30 37 chr17 88359205 88359535 -1145018 - AluSg SINE Alu 0 310 1 712 162 0 0 chr17 88359541 88359652 -1144901 - AluSq/x SINE Alu -202 111 1 839 109 0 0 chr17 88360705 88360815 -1143738 + AluSc SINE Alu 130 239 -70 1562 84 13 18 chr17 88360815 88361041 -1143512 - AluSg SINE Alu -85 225 1 759 155 0 31 chr17 88362611 88362740 -1141813 - FLAM_C SINE Alu -16 127 3 1126 275 94 34 chr17 88363462 88363939 -1140614 - L1MB7 LINE L1 -19 6165 5660 2207 109 3 0 chr17 88363939 88364243 -1140310 + AluSx SINE Alu 1 305 -7 2227 98 0 13 chr17 88368051 88368358 -1136195 + AluSx SINE Alu 1 303 -9 2415 50 3 3 chr17 88371186 88371487 -1133066 - AluY SINE Alu -10 301 1 995 178 65 87 chr17 88371842 88372117 -1132436 - Tigger3(Golem) DNA MER2_type -1 3028 2760 2326 71 0 3 chr17 88372124 88372421 -1132132 + AluSc SINE Alu 1 296 -13 308 227 0 30 chr17 88372429 88372495 -1132058 - L1MC4 LINE L1 -1339 6703 6640 1510 179 0 0 chr17 88372913 88373159 -1131394 - AluJb SINE Alu -66 246 1 223 291 18 0 chr17 88376627 88376682 -1127871 - MIR SINE MIR -97 165 110 2155 94 0 14 chr17 88378062 88378240 -1126313 - AluSg SINE Alu -1 309 135 2316 89 0 0 chr17 88378240 88378542 -1126011 - AluY SINE Alu -9 302 1 2155 94 0 14 chr17 88378542 88378660 -1125893 - AluSg SINE Alu -175 135 17 1587 147 57 4 chr17 88378852 88379131 -1125422 - AluJo SINE Alu -18 294 1 2316 95 0 0 chr17 88379259 88379564 -1124989 + AluSc SINE Alu 1 305 -4 259 253 11 59 chr17 88381525 88381711 -1122842 + (GCGTG)n Simple_repeat Simple_repeat 2 178 0 225 258 5 59 chr17 88381886 88382072 -1122481 + (ACGTG)n Simple_repeat Simple_repeat 4 179 0 681 247 98 86 chr17 88382564 88382973 -1121580 - MLT2D LTR ERVL 0 414 1 353 318 40 45 chr17 88383032 88383208 -1121345 - L1MEc LINE L1 -4119 2277 2103 429 231 90 0 chr17 88384363 88384497 -1120056 - MLT1F LTR MaLR -2 540 395 514 255 106 16 chr17 88384518 88384773 -1119780 - MLT1F1 LTR MaLR -73 494 217 184 316 51 25 chr17 88384940 88385019 -1119534 - MIR SINE MIR -59 149 69 398 281 96 0 chr17 88385271 88385417 -1119136 - MIR SINE MIR -79 183 24 255 250 36 0 chr17 88390213 88390297 -1114256 + Charlie5 DNA MER1_type 19 105 -2507 1359 145 70 12 chr17 88390309 88390550 -1114003 + AluJo SINE Alu 37 291 -21 2001 102 10 0 chr17 88392645 88392939 -1111614 - AluSc SINE Alu -12 297 1 1498 171 57 14 chr17 88392940 88393221 -1111332 - AluJo SINE Alu -19 293 1 183 80 0 0 chr17 88393370 88393395 -1111158 + (TC)n Simple_repeat Simple_repeat 1 25 0 1199 109 0 0 chr17 88394614 88394779 -1109774 - AluSg/x SINE Alu -11 299 135 434 230 137 31 chr17 88395284 88395445 -1109108 - MER106A DNA MER1_type -58 178 1 2874 225 74 29 chr17 88396000 88396634 -1107919 - L1MB7 LINE L1 -15 6169 5482 1502 195 7 14 chr17 88396634 88396931 -1107622 - AluSq SINE Alu -12 301 7 2874 225 74 29 chr17 88396931 88397227 -1107326 - L1MB7 LINE L1 -702 5482 5201 1332 173 0 66 chr17 88397227 88397397 -1107156 - AluJo SINE Alu -11 301 158 1867 155 0 20 chr17 88397397 88397701 -1106852 - AluJb SINE Alu -14 298 1 1332 173 0 66 chr17 88397701 88397831 -1106722 - AluJo SINE Alu -154 158 21 445 238 49 37 chr17 88397840 88398004 -1106549 - L1MB7 LINE L1 -942 5204 5039 684 214 8 0 chr17 88398590 88398716 -1105837 + FLAM_A SINE Alu 1 127 -6 2111 100 31 0 chr17 88398889 88399179 -1105374 + AluSx SINE Alu 1 299 -13 818 204 96 24 chr17 88399589 88399756 -1104797 + AluJo SINE Alu 73 251 -61 2126 109 3 0 chr17 88400079 88400382 -1104171 - AluSx SINE Alu -8 304 1 663 204 53 58 chr17 88400572 88400778 -1103775 - L1M4c LINE L1 -4991 1655 1451 407 249 38 126 chr17 88400787 88401044 -1103509 - L1M4c LINE L1 -5016 1526 1315 1310 207 60 17 chr17 88401044 88401343 -1103210 - AluJb SINE Alu 0 312 1 407 249 38 126 chr17 88401343 88401483 -1103070 - L1M4c LINE L1 -5227 1315 1164 44 75 0 0 chr17 88401990 88402083 -1102470 + AT_rich Low_complexity Low_complexity 1 93 0 226 289 38 63 chr17 88402940 88403099 -1101454 - L2 LINE L2 -1075 2239 2085 441 172 0 0 chr17 88403801 88403888 -1100665 - L1MB8 LINE L1 0 6178 6092 2377 178 48 54 chr17 88403904 88404295 -1100258 - L1MB4 LINE L1 -6 6174 5782 2411 73 0 13 chr17 88404295 88404610 -1099943 - AluY SINE Alu 0 311 1 1046 184 6 0 chr17 88404616 88404784 -1099769 - FAM SINE Alu -6 169 1 2377 178 48 54 chr17 88404784 88404974 -1099579 - L1MB4 LINE L1 -403 5777 5590 219 36 0 0 chr17 88408593 88408621 -1095932 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 394 329 3 15 chr17 88409325 88409661 -1094892 + (TG)n Simple_repeat Simple_repeat 1 331 0 202 361 0 0 chr17 88409690 88409762 -1094791 + (TG)n Simple_repeat Simple_repeat 1 72 0 361 363 6 0 chr17 88409853 88410024 -1094529 + (TG)n Simple_repeat Simple_repeat 1 172 0 396 352 4 2 chr17 88410171 88410661 -1093892 + (TG)n Simple_repeat Simple_repeat 1 491 0 234 339 0 0 chr17 88410672 88410781 -1093772 + (TG)n Simple_repeat Simple_repeat 1 109 0 331 365 0 11 chr17 88410868 88411049 -1093504 + (TG)n Simple_repeat Simple_repeat 1 179 0 392 257 190 11 chr17 88411093 88411272 -1093281 + Charlie2 DNA MER1_type 28 238 -2624 547 258 51 92 chr17 88411426 88411546 -1093007 + Charlie2 DNA MER1_type 2025 2148 -714 1769 173 16 0 chr17 88411546 88411852 -1092701 + AluJb SINE Alu 1 311 -1 547 258 51 92 chr17 88411852 88411901 -1092652 + Charlie2 DNA MER1_type 2148 2197 -665 1779 169 3 0 chr17 88411901 88412202 -1092351 + AluJo SINE Alu 1 302 -10 547 258 51 92 chr17 88412202 88412640 -1091913 + Charlie2 DNA MER1_type 2197 2608 -254 882 159 0 29 chr17 88412643 88412813 -1091740 - AluJb SINE Alu -22 290 126 287 217 231 7 chr17 88412849 88412992 -1091561 + Charlie2 DNA MER1_type 2666 2840 -22 2262 91 0 7 chr17 88413950 88414257 -1090296 - AluSq SINE Alu -8 305 1 196 67 89 0 chr17 88415224 88415269 -1089284 + A-rich Low_complexity Low_complexity 2 50 0 202 303 26 19 chr17 88417869 88418024 -1086529 + (CATA)n Simple_repeat Simple_repeat 3 158 0 2046 77 84 3 chr17 88419489 88419776 -1084777 - AluY SINE Alu -1 310 1 1273 153 40 9 chr17 88419839 88420062 -1084491 - AluJb SINE Alu -1 311 82 1342 270 88 16 chr17 88420168 88420657 -1083896 - MLT1H1 LTR MaLR 0 555 32 1070 248 22 53 chr17 88421026 88421304 -1083249 - HAL1 LINE L1 -689 1818 1552 2536 61 0 0 chr17 88421304 88421615 -1082938 - AluY SINE Alu 0 311 1 1070 248 22 53 chr17 88421615 88421691 -1082862 - HAL1 LINE L1 -955 1552 1475 236 286 55 0 chr17 88421702 88421793 -1082760 - L1MC4 LINE L1 -1 8041 7946 290 128 0 64 chr17 88421805 88421899 -1082654 + (TTCCC)n Simple_repeat Simple_repeat 3 90 0 347 142 0 82 chr17 88421982 88422165 -1082388 + (TTCCC)n Simple_repeat Simple_repeat 1 168 0 440 260 205 30 chr17 88422274 88422474 -1082079 - L1ME2 LINE L1 -13 6151 5917 338 270 94 6 chr17 88422543 88422702 -1081851 - HAL1 LINE L1 -1374 1133 961 270 0 0 0 chr17 88422742 88422772 -1081781 + (TG)n Simple_repeat Simple_repeat 2 31 0 649 185 0 17 chr17 88422772 88422891 -1081662 - FLAM_A SINE Alu -15 118 2 225 311 60 32 chr17 88422974 88423257 -1081296 - HAL1 LINE L1 -2160 347 57 331 276 47 0 chr17 88423767 88423937 -1080616 + (TCCTG)n Simple_repeat Simple_repeat 3 180 0 316 323 30 0 chr17 88423910 88424077 -1080476 + (TCCCG)n Simple_repeat Simple_repeat 3 174 0 * 356 272 41 0 chr17 88424017 88424186 -1080367 + (TCCTG)n Simple_repeat Simple_repeat 3 178 0 251 323 10 21 chr17 88424229 88424325 -1080228 + MIR SINE MIR 45 139 -123 281 143 57 48 chr17 88424839 88424944 -1079609 + (CTG)n Simple_repeat Simple_repeat 1 106 0 380 67 62 62 chr17 88424945 88425124 -1079429 + (CTGTG)n Simple_repeat Simple_repeat 2 180 0 314 84 63 59 chr17 88425175 88425467 -1079086 + (CTGTG)n Simple_repeat Simple_repeat 1 293 0 645 273 84 108 chr17 88425607 88426153 -1078400 + L1M4 LINE L1 2485 3017 -3129 527 318 47 0 chr17 88426164 88426334 -1078219 + MER58C DNA MER1_type 12 189 -26 356 379 149 0 chr17 88426436 88426705 -1077848 + L1M4 LINE L1 3144 3452 -2694 1421 257 84 44 chr17 88426770 88427148 -1077405 - L1MB8 LINE L1 -1 6177 5771 1245 240 55 40 chr17 88427148 88427527 -1077026 - MLT1B LTR MaLR -4 386 2 1421 257 84 44 chr17 88427527 88427674 -1076879 - L1MB8 LINE L1 -407 5771 5631 191 328 33 0 chr17 88427675 88427736 -1076817 + MIR SINE MIR 165 227 -35 1550 176 19 59 chr17 88427855 88428179 -1076374 - AluJo SINE Alu 0 312 2 1546 178 7 14 chr17 88428193 88428486 -1076067 - AluJb SINE Alu -12 300 10 253 146 18 18 chr17 88428945 88428961 -1075592 - MER46A DNA MER2_type -77 159 144 2628 191 125 60 chr17 88428961 88429688 -1074865 + Tigger4(Zombi) DNA MER2_type 1 774 -1957 453 242 39 8 chr17 88429687 88429815 -1074738 - MLT1A1 LTR MaLR -221 144 13 * 1599 170 9 28 chr17 88430038 88430356 -1074197 - AluJb SINE Alu 0 312 1 1168 231 99 41 chr17 88430407 88430771 -1073782 - L1MB5 LINE L1 -9 6165 5781 789 146 8 8 chr17 88430783 88430913 -1073640 - FLAM_C SINE Alu 0 143 14 375 303 20 16 chr17 88430975 88431114 -1073439 + L1MEc LINE L1 2304 2398 -3817 765 183 0 8 chr17 88431121 88431252 -1073301 + FLAM_C SINE Alu 10 139 -4 389 248 64 8 chr17 88431262 88431387 -1073166 + MLT1A1 LTR MaLR 13 144 -221 600 239 15 0 chr17 88431387 88431521 -1073032 - L1MB5 LINE L1 -416 5758 5623 1417 195 21 10 chr17 88431754 88432221 -1072332 - L1MB5 LINE L1 -528 5650 5176 36 0 0 0 chr17 88432529 88432565 -1071988 + AT_rich Low_complexity Low_complexity 1 36 0 984 34 0 0 chr17 88432567 88432684 -1071869 - L1PA2 LINE L1 -1 6154 6038 1958 157 0 3 chr17 88432684 88432996 -1071557 - AluJb SINE Alu -1 311 1 2252 49 16 29 chr17 88436464 88436772 -1067781 - AluY SINE Alu -7 304 1 1212 171 14 5 chr17 88443872 88444089 -1060464 + AluJb SINE Alu 87 305 -7 180 280 53 27 chr17 88445546 88445621 -1058932 - MIR SINE MIR -80 182 106 207 359 43 43 chr17 88447238 88447330 -1057223 - MIR SINE MIR -55 207 116 21 0 0 0 chr17 88450634 88450655 -1053898 + AT_rich Low_complexity Low_complexity 1 21 0 2139 83 21 7 chr17 88451891 88452181 -1052372 - AluSg SINE Alu -16 294 1 358 259 54 0 chr17 88452539 88452651 -1051902 - L1MD3 LINE L1 0 7995 7878 257 241 69 0 chr17 88452704 88452791 -1051762 - L1MC4a LINE L1 -229 7579 7487 547 174 18 9 chr17 88452797 88452906 -1051647 - L1MB7 LINE L1 -3 6181 6072 879 264 128 98 chr17 88452987 88453765 -1050788 - L1MC4a LINE L1 -314 7494 6693 473 280 44 0 chr17 88454235 88454416 -1050137 - L1ME1 LINE L1 -139 6041 5846 333 206 152 0 chr17 88454523 88454615 -1049938 - MLT1D LTR MaLR -153 352 247 559 173 18 18 chr17 88454733 88454843 -1049710 - FLAM_C SINE Alu -21 122 13 229 295 123 16 chr17 88454892 88455014 -1049539 - MLT1D LTR MaLR -362 143 9 266 177 0 16 chr17 88456423 88456485 -1048068 + CT-rich Low_complexity Low_complexity 2 62 0 523 80 0 0 chr17 88461169 88461244 -1043309 + (TCCCC)n Simple_repeat Simple_repeat 1 75 0 2100 85 4 0 chr17 88461244 88461515 -1043038 - AluSx SINE Alu -39 273 2 2352 280 95 14 chr17 88461517 88461679 -1042874 - L1MD2 LINE L1 -37 6322 6175 342 0 0 0 chr17 88461679 88461717 -1042836 + (TG)n Simple_repeat Simple_repeat 1 38 0 2352 280 95 14 chr17 88461717 88462687 -1041866 - L1MD2 LINE L1 -184 6175 5090 372 309 54 66 chr17 88462743 88462966 -1041587 - L1MD2 LINE L1 -1319 4827 4603 338 133 0 0 chr17 88468863 88468923 -1035630 - Alu SINE Alu -2 298 239 2043 101 31 0 chr17 88469251 88469537 -1035016 + AluSx SINE Alu 1 295 -17 234 324 37 9 chr17 88470485 88470530 -1034023 - L1MA10 LINE L1 -9 6325 6281 254 318 89 19 chr17 88470530 88470744 -1033809 - L1ME1 LINE L1 -44 6122 5894 273 330 82 5 chr17 88470844 88471001 -1033552 - L1ME1 LINE L1 -466 5776 5598 2056 132 10 3 chr17 88471001 88471311 -1033242 - AluJb SINE Alu 0 312 1 273 330 82 5 chr17 88471311 88471359 -1033194 - L1ME1 LINE L1 -644 5598 5555 376 278 36 21 chr17 88471475 88471742 -1032811 - L1ME1 LINE L1 -681 5485 5187 2328 74 0 3 chr17 88471785 88472082 -1032471 + AluSc SINE Alu 1 296 -13 317 347 13 47 chr17 88472106 88472256 -1032297 - L1ME1 LINE L1 -5 6161 6017 366 386 99 12 chr17 88473072 88473656 -1030897 - L1ME1 LINE L1 -1 6165 4959 1104 265 100 14 chr17 88473969 88474534 -1030019 - L1ME3 LINE L1 -282 5880 5280 796 277 153 20 chr17 88474695 88475190 -1029363 - L1ME1 LINE L1 -124 6042 5482 444 265 12 18 chr17 88476590 88476756 -1027797 - L1ME1 LINE L1 -3625 2521 2357 406 246 21 42 chr17 88476822 88476964 -1027589 - MER58C DNA MER1_type -68 147 9 304 321 143 24 chr17 88480421 88480708 -1023845 + L1M2 LINE L1 795 1115 -5734 1126 240 93 0 chr17 88482242 88482608 -1021945 - MER68 LTR ERV1 -129 433 34 890 152 0 0 chr17 88482748 88482880 -1021673 + FLAM_C SINE Alu 1 132 -1 316 326 35 21 chr17 88484088 88484232 -1020321 + MIR SINE MIR 113 258 -4 23 33 0 0 chr17 88484581 88484611 -1019942 + AT_rich Low_complexity Low_complexity 1 30 0 376 275 105 7 chr17 88485250 88485548 -1019005 - L1ME2 LINE L1 -208 5956 5596 346 293 54 69 chr17 88485575 88485897 -1018656 - L1ME2 LINE L1 -743 5403 5205 2000 112 6 19 chr17 88485900 88486212 -1018341 - AluSx SINE Alu -4 308 1 427 365 58 11 chr17 88490284 88490473 -1014080 - HAL1 LINE L1 -29 2478 2281 298 227 45 23 chr17 88490990 88491078 -1013475 - MLT1I LTR MaLR -2 407 318 574 347 107 69 chr17 88491375 88491644 -1012909 - L1M4 LINE L1 -4463 2362 2066 1901 101 0 22 chr17 88491644 88491922 -1012631 - AluSq SINE Alu -10 303 32 574 347 107 69 chr17 88491922 88492131 -1012422 - L1M4 LINE L1 -4759 2066 1866 236 294 34 73 chr17 88492133 88492337 -1012216 - L1M4 LINE L1 -4832 1710 1515 376 264 94 84 chr17 88492343 88492415 -1012138 - L1M4 LINE L1 -5175 1367 1297 2102 104 3 0 chr17 88492415 88492702 -1011851 - AluSc SINE Alu 0 309 22 376 264 94 84 chr17 88492702 88492901 -1011652 - L1M4 LINE L1 -5245 1297 1126 331 336 84 45 chr17 88493421 88493778 -1010775 - L1MD2 LINE L1 -2 6426 6056 258 306 28 3 chr17 88493912 88494036 -1010517 - L1MD2 LINE L1 -381 5852 5724 1857 96 8 4 chr17 88497533 88497794 -1006759 + AluSx SINE Alu 51 312 0 1861 136 4 0 chr17 88499381 88499653 -1004900 - AluSx SINE Alu -39 273 1 788 173 153 0 chr17 88500010 88500160 -1004393 + AluSg/x SINE Alu 118 290 -20 233 289 0 52 chr17 88503967 88504064 -1000489 + C-rich Low_complexity Low_complexity 5 96 0 372 274 44 0 chr17 88507404 88507539 -997014 - L1MD2 LINE L1 -1037 5178 5038 307 324 58 5 chr17 88507636 88507843 -996710 - L1MD2 LINE L1 -1308 4907 4690 1646 125 111 18 chr17 88508541 88508820 -995733 - AluJb SINE Alu -7 305 1 931 157 35 6 chr17 88508889 88509061 -995492 - AluSg/x SINE Alu -12 300 124 391 385 56 19 chr17 88509497 88509767 -994786 - L1MD2 LINE L1 -4233 2163 1884 339 333 53 34 chr17 88509879 88510136 -994417 - L1MD2 LINE L1 -4573 1642 1421 246 301 174 27 chr17 88510961 88511220 -993333 - L2 LINE L2 -628 2686 2390 204 259 120 0 chr17 88512582 88512690 -991863 + MER5A DNA MER1_type 3 123 -66 324 127 0 0 chr17 88514532 88514587 -989966 + (CA)n Simple_repeat Simple_repeat 1 55 0 417 309 99 5 chr17 88518746 88519029 -985524 - L2 LINE L2 -110 3203 2861 304 349 30 38 chr17 88519289 88519421 -985132 + L1MEd LINE L1 802 932 -5484 327 266 239 0 chr17 88519508 88519696 -984857 + L1MEd LINE L1 1237 1469 -4947 370 320 112 70 chr17 88519711 88519965 -984588 + L1MEd LINE L1 1599 1804 -983 789 183 162 31 chr17 88519965 88520156 -984397 - MER20 DNA MER1_type -3 216 1 370 320 112 70 chr17 88520156 88520285 -984268 + L1MEd LINE L1 1804 1926 -861 355 314 115 42 chr17 88520419 88520820 -983733 + L1MEd LINE L1 2193 2817 -3609 535 343 102 13 chr17 88520867 88520911 -983642 + L1MEd LINE L1 3087 3126 -3300 306 0 0 0 chr17 88520911 88520945 -983608 + (TG)n Simple_repeat Simple_repeat 2 35 0 535 343 102 13 chr17 88520945 88521215 -983338 + L1MEd LINE L1 3126 3429 -2997 319 320 26 13 chr17 88522310 88522463 -982090 + L1MB7 LINE L1 5136 5290 -856 247 331 94 11 chr17 88523566 88523747 -980806 + L1MB7 LINE L1 5602 5797 -2011 348 277 190 27 chr17 88524021 88524205 -980348 + L1MC5 LINE L1 7508 7721 -240 404 204 167 0 chr17 88524675 88524783 -979770 - Tigger1 DNA MER2_type -2198 220 95 2041 174 44 2 chr17 88524932 88525345 -979208 - Tigger1 DNA MER2_type -873 1545 1116 724 81 130 0 chr17 88525345 88525468 -979085 + MER85 DNA T2_type 1 139 0 3812 169 84 13 chr17 88525484 88526452 -978101 - Tigger1 DNA MER2_type -1330 1088 21 20411 95 20 45 chr17 88526725 88530535 -974018 + L1PA8 LINE L1 2293 6171 -1 449 159 31 25 chr17 88533153 88533530 -971023 + (TG)n Simple_repeat Simple_repeat 1 379 0 206 354 24 24 chr17 88533570 88533734 -970819 + (TATG)n Simple_repeat Simple_repeat 4 167 0 * 247 321 44 19 chr17 88533635 88533794 -970759 + (CATG)n Simple_repeat Simple_repeat 3 165 0 * 417 254 7 35 chr17 88533694 88533836 -970717 + (TG)n Simple_repeat Simple_repeat 1 138 0 2131 106 3 0 chr17 88536888 88537180 -967373 + AluSp SINE Alu 1 293 -20 1869 136 20 3 chr17 88537747 88538042 -966511 + AluSx SINE Alu 1 300 -12 2173 147 32 23 chr17 88542753 88543189 -961364 - MER83 LTR ERV1 -8 440 1 633 231 22 44 chr17 88544783 88545012 -959541 + L1MB7 LINE L1 5959 6182 -2 332 395 42 46 chr17 88545025 88545059 -959494 + L1MEd LINE L1 938 971 -5148 1748 147 26 32 chr17 88545059 88545372 -959181 + AluJb SINE Alu 1 311 -1 332 395 42 46 chr17 88545372 88545575 -958978 + L1MEd LINE L1 971 1174 -4945 371 255 76 6 chr17 88546870 88547027 -957526 - L1MD1 LINE L1 -7 6235 6068 1201 220 104 3 chr17 88547273 88547627 -956926 - L1MD1 LINE L1 -543 5699 5310 368 269 175 35 chr17 88549048 88549334 -955219 + MLT1G1 LTR MaLR 88 413 -182 2321 72 0 7 chr17 88549624 88549917 -954636 + AluSg SINE Alu 1 291 -19 204 354 0 0 chr17 88550511 88550593 -953960 + CT-rich Low_complexity Low_complexity 3 84 0 2058 121 10 0 chr17 88550741 88551031 -953522 - AluSx SINE Alu -19 293 1 1149 38 0 0 chr17 88551033 88551165 -953388 - AluSp SINE Alu -181 132 1 290 265 41 54 chr17 88551630 88551777 -952776 - L1ME LINE L1 -335 5831 5687 579 306 76 0 chr17 88551823 88552020 -952533 - L1ME LINE L1 -461 5705 5480 1644 134 54 27 chr17 88552020 88552318 -952235 - AluJb SINE Alu -1 311 6 579 306 76 0 chr17 88552318 88552395 -952158 - L1ME LINE L1 -686 5480 5410 330 209 96 9 chr17 88552396 88552511 -952042 - MER20 DNA MER1_type -94 125 1 523 175 42 8 chr17 88552752 88552872 -951681 + MLT1C LTR MaLR 1 124 -343 1221 311 90 9 chr17 88552897 88553622 -950931 - L1ME LINE L1 -747 5421 4638 1384 176 115 11 chr17 88553629 88553907 -950646 + AluJo SINE Alu 1 307 -5 629 185 46 0 chr17 88553907 88554015 -950538 + AluJb SINE Alu 134 246 -66 242 299 97 8 chr17 88555970 88556104 -948449 + L1MEc LINE L1 36 181 -6215 535 329 78 6 chr17 88556535 88556866 -947687 - HAL1 LINE L1 -682 1825 1471 257 296 9 26 chr17 88556924 88557039 -947514 - HAL1 LINE L1 -1134 1373 1261 1347 249 58 34 chr17 88557217 88557799 -946754 + L1M4 LINE L1 2873 3468 -2678 1703 271 98 20 chr17 88557814 88558629 -945924 + L1M4 LINE L1 4330 5208 -938 2175 245 65 17 chr17 88558672 88559329 -945224 - MER21B LTR ERV1 -77 786 98 334 256 11 11 chr17 88559550 88559640 -944913 - Tigger2 DNA MER2_type -2 2716 2627 1180 172 65 8 chr17 88559896 88560158 -944395 + LTR23 LTR ERV1 161 437 0 1314 163 4 32 chr17 88560161 88560413 -944140 - Tigger2 DNA MER2_type -105 2613 2369 573 169 24 0 chr17 88560582 88560706 -943847 - Tigger2 DNA MER2_type -2591 127 1 892 166 121 5 chr17 88560836 88561059 -943494 + MLT1A1 LTR MaLR 117 365 0 284 279 0 78 chr17 88561210 88561339 -943214 + L1MC4a LINE L1 7660 7778 -30 2131 102 3 0 chr17 88561339 88561624 -942929 + AluSx SINE Alu 1 286 -26 325 197 16 0 chr17 88561632 88561693 -942860 + L1MD3 LINE L1 7931 7992 -3 221 300 25 12 chr17 88561816 88561896 -942657 + MER5A DNA MER1_type 45 125 -64 590 206 137 34 chr17 88562112 88562345 -942208 + MLT1B LTR MaLR 1 257 -133 1631 114 0 4 chr17 88563339 88563619 -940934 - L1P LINE L1 -1014 5132 4854 * 4064 123 0 1 chr17 88563616 88564285 -940268 + L1P LINE L1 4202 4869 -1277 256 180 0 0 chr17 88564286 88564336 -940217 + Ricksha DNA DNA 2420 2469 -385 * 1218 138 13 9 chr17 88564329 88564560 -939993 + Ricksha DNA DNA 2929 3160 -94 636 140 0 0 chr17 88564591 88564698 -939855 - L1MA3 LINE L1 0 6305 6199 500 150 38 0 chr17 88564703 88564826 -939727 - Ricksha DNA DNA -1021 2230 24 627 280 21 0 chr17 88567081 88567267 -937286 - MLT1B LTR MaLR -11 379 190 181 310 0 0 chr17 88568652 88568710 -935843 - L2 LINE L2 -624 2690 2633 561 260 109 41 chr17 88572128 88572467 -932086 + MSTB1 LTR MaLR 1 362 -70 315 221 0 0 chr17 88572478 88572546 -932007 - Charlie5 DNA MER1_type -207 2405 2338 862 159 22 60 chr17 88573403 88573418 -931135 - FAM SINE Alu -136 175 161 1826 146 10 0 chr17 88573418 88573706 -930847 + AluJb SINE Alu 1 291 -21 862 159 22 60 chr17 88573706 88573872 -930681 - FAM SINE Alu -150 161 1 871 93 16 8 chr17 88573889 88574018 -930535 + AluSq/x SINE Alu 1 130 -182 5108 92 22 4 chr17 88574118 88574918 -929635 + L1PA10 LINE L1 5354 6168 0 3408 132 123 142 chr17 88574922 88575408 -929145 - Ricksha DNA DNA -459 2787 2293 187 297 99 22 chr17 88575408 88575499 -929054 + L2 LINE L2 615 712 -2602 3408 132 123 142 chr17 88575499 88576021 -928532 - Ricksha DNA DNA -953 2293 1710 438 226 9 26 chr17 88576000 88576115 -928438 - Ricksha DNA DNA -1059 122 10 * 1255 181 54 45 chr17 88576124 88576455 -928098 + MLT1A2 LTR MaLR 41 374 0 613 185 20 14 chr17 88576461 88576607 -927946 + L1ME2 LINE L1 4968 5114 -1032 1577 121 25 35 chr17 88576638 88576920 -927633 + THE1B LTR MaLR 1 279 -85 13599 128 24 66 chr17 88576929 88580776 -923777 + L1MA3 LINE L1 1944 5953 -1771 2284 117 0 7 chr17 88580776 88581083 -923470 - AluSg SINE Alu -5 305 1 13599 128 24 66 chr17 88581083 88581642 -922911 + L1MA3 LINE L1 5953 6534 -1190 2226 116 3 3 chr17 88581642 88581944 -922609 + AluSg SINE Alu 1 302 -8 13599 128 24 66 chr17 88581944 88583324 -921229 + L1MA3 LINE L1 6534 7465 -259 366 250 26 0 chr17 88583328 88583404 -921149 - L1MC4 LINE L1 -1351 6691 6614 1492 135 0 19 chr17 88583414 88583673 -920880 + L1MA2 LINE L1 6051 6304 0 2022 189 18 44 chr17 88583677 88583745 -920808 + L1ME2 LINE L1 5090 5158 -1008 2391 99 0 0 chr17 88583745 88584048 -920505 - AluY SINE Alu -8 303 1 2022 189 18 44 chr17 88584048 88584605 -919948 + L1ME2 LINE L1 5158 5698 -468 315 189 203 71 chr17 88584678 88584816 -919737 + L1ME1 LINE L1 5662 5801 -363 1744 124 0 0 chr17 88584816 88585073 -919480 - Tigger2 DNA MER2_type -10 2708 2452 3222 204 31 41 chr17 88585111 88585353 -919200 - Tigger2 DNA MER2_type -1947 771 528 2360 103 0 0 chr17 88585353 88585663 -918890 - AluSg SINE Alu 0 310 1 3222 204 31 41 chr17 88585663 88586195 -918358 - Tigger2 DNA MER2_type -2190 528 5 628 277 74 25 chr17 88586234 88586519 -918034 + L1ME1 LINE L1 5863 6161 -5 677 229 94 19 chr17 88586561 88586828 -917725 + L1MC5 LINE L1 7305 7591 -370 240 250 16 0 chr17 88586934 88586998 -917555 + L1ME2 LINE L1 5908 5972 -192 1768 170 50 0 chr17 88587175 88587457 -917096 - AluJb SINE Alu -11 301 6 840 196 0 0 chr17 88592868 88593006 -911547 - FRAM SINE Alu -38 138 1 253 261 152 14 chr17 88593028 88593166 -911387 + L1ME3A LINE L1 5268 5424 -740 335 202 93 16 chr17 88593749 88593878 -910675 + L1ME3A LINE L1 5830 5968 -202 1618 168 37 21 chr17 88593897 88594224 -910329 + MER1B DNA MER1_type 4 335 -2 248 290 69 69 chr17 88594226 88594471 -910082 + L1ME3A LINE L1 5923 6167 -3 288 248 9 40 chr17 88594694 88594917 -909636 + GA-rich Low_complexity Low_complexity 1 215 0 240 133 5 92 chr17 88594893 88595088 -909465 + (GGA)n Simple_repeat Simple_repeat 2 179 0 * 1874 154 53 35 chr17 88595351 88595625 -908928 + L1MA4 LINE L1 5858 6143 -157 2046 141 3 0 chr17 88595625 88595922 -908631 + AluSx SINE Alu 1 298 -14 1874 154 53 35 chr17 88595922 88596043 -908510 + L1MA4 LINE L1 6143 6260 -40 199 362 26 52 chr17 88596782 88596898 -907655 - MIR3 SINE MIR -41 167 55 2276 236 38 0 chr17 88596899 88597531 -907022 + ERVL LTR ERVL 4475 5130 -634 1047 190 112 4 chr17 88597720 88597989 -906564 + L1MB3 LINE L1 5884 6181 -2 2400 97 0 0 chr17 88598016 88598316 -906237 - AluSq SINE Alu -13 300 1 549 268 108 86 chr17 88598319 88598661 -905892 + L1ME LINE L1 1130 1508 -4908 1982 203 123 97 chr17 88599463 88600516 -904037 + L1ME LINE L1 4383 5463 -963 415 226 60 15 chr17 88603179 88603312 -901241 + L1MC4 LINE L1 6925 7063 -979 312 324 59 7 chr17 88604458 88604594 -899959 + L1ME LINE L1 5598 5740 -704 272 332 67 29 chr17 88604677 88604885 -899668 + L1ME LINE L1 5892 6107 -335 644 328 104 0 chr17 88605855 88606200 -898353 + L1ME2 LINE L1 4806 5186 -960 979 173 22 11 chr17 88606201 88606386 -898167 + AluJb SINE Alu 122 308 -4 422 208 9 9 chr17 88606387 88606493 -898060 + L1ME2 LINE L1 5203 5308 -838 1993 125 14 4 chr17 88606493 88606772 -897781 + AluSx SINE Alu 1 282 -30 932 257 142 46 chr17 88606823 88606904 -897649 + L1ME2 LINE L1 5317 5389 -775 2703 26 7 3 chr17 88606904 88607214 -897339 + AluY SINE Alu 1 311 0 932 257 142 46 chr17 88607214 88607823 -896730 + L1ME2 LINE L1 5389 6095 -69 310 225 28 67 chr17 88608450 88608680 -895873 + (CAGAC)n Simple_repeat Simple_repeat 1 220 0 310 225 28 67 chr17 88608824 88609054 -895499 + (CAGAC)n Simple_repeat Simple_repeat 1 220 0 2715 24 0 0 chr17 88609998 88610294 -894259 - AluY SINE Alu -15 296 1 2475 83 3 6 chr17 88610451 88610763 -893790 - AluSx SINE Alu -1 311 1 345 45 0 0 chr17 88610995 88611039 -893514 + THE1B LTR MaLR 1 44 -320 345 45 0 0 chr17 88611045 88611089 -893464 + THE1C LTR MaLR 1 44 -331 1881 151 92 15 chr17 88611099 88611437 -893116 + THE1B LTR MaLR 1 364 0 2172 90 38 0 chr17 88611703 88611992 -892561 - AluSp SINE Alu -13 300 1 21 36 0 0 chr17 88612231 88612259 -892294 + AT_rich Low_complexity Low_complexity 1 28 0 236 178 22 0 chr17 88612645 88612690 -891863 + L1ME3A LINE L1 5703 5748 -422 704 240 54 5 chr17 88612827 88613048 -891505 + L1ME3A LINE L1 5939 6170 0 2284 75 3 3 chr17 88615096 88615389 -889164 + AluY SINE Alu 1 293 -18 336 286 42 17 chr17 88616455 88616574 -887979 - MIR SINE MIR -34 228 107 771 240 35 0 chr17 88616914 88617085 -887468 + MER5B DNA MER1_type 1 177 -1 569 287 48 8 chr17 88617303 88617554 -886999 + HAL1 LINE L1 1365 1625 -882 2464 77 0 3 chr17 88617606 88617905 -886648 + AluY SINE Alu 1 298 -13 1374 249 44 10 chr17 88617907 88618405 -886148 + L1M4c LINE L1 1057 1571 -4813 376 244 0 0 chr17 88618413 88618491 -886062 - Tigger5 DNA MER2_type 0 2323 2246 433 242 11 0 chr17 88618540 88618631 -885922 - Tigger5 DNA MER2_type -2231 92 1 3731 254 64 26 chr17 88618631 88618906 -885647 + L1M4c LINE L1 1729 1992 -4390 1678 180 0 0 chr17 88618906 88619178 -885375 + AluSx SINE Alu 1 272 -40 3731 254 64 26 chr17 88619178 88620877 -883676 + L1M4c LINE L1 1992 3784 -2598 21 36 0 0 chr17 88821240 88821268 -683285 + GC_rich Low_complexity Low_complexity 1 28 0 188 146 0 21 chr17 88823237 88823285 -681268 + (CCCCCG)n Simple_repeat Simple_repeat 5 51 0 43 35 0 0 chr17 88823466 88823523 -681030 + GC_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr17 88823739 88823760 -680793 + GC_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr17 88828789 88828821 -675732 + (CA)n Simple_repeat Simple_repeat 1 32 0 2462 54 0 0 chr17 88828989 88829285 -675268 - AluY SINE Alu -9 302 7 24 0 0 0 chr17 88831530 88831554 -672999 + GC_rich Low_complexity Low_complexity 1 24 0 226 207 86 0 chr17 88832277 88832335 -672218 + CT-rich Low_complexity Low_complexity 5 67 0 1548 155 11 29 chr17 88833040 88833318 -671235 - AluJb SINE Alu -6 306 34 728 192 0 31 chr17 88833393 88833523 -671030 + FLAM_C SINE Alu 5 130 -3 417 267 0 0 chr17 88834188 88834364 -670189 + (TG)n Simple_repeat Simple_repeat 1 176 0 377 238 9 9 chr17 88834379 88834719 -669834 + (TG)n Simple_repeat Simple_repeat 1 340 0 568 226 110 12 chr17 88834732 88834896 -669657 + MLT1F1 LTR MaLR 332 511 -56 2073 82 4 11 chr17 88834897 88835177 -669376 - AluSx SINE Alu -14 298 21 1877 99 20 17 chr17 88835337 88835630 -668923 + AluY SINE Alu 1 294 -17 233 197 66 0 chr17 88835983 88836059 -668494 + (CACGC)n Simple_repeat Simple_repeat 1 81 0 1905 81 9 97 chr17 88836349 88836669 -667884 + AluSq SINE Alu 3 294 -19 24 53 0 0 chr17 88837558 88837596 -666957 + GC_rich Low_complexity Low_complexity 1 38 0 209 103 59 29 chr17 88839233 88839301 -665252 + (CAGGG)n Simple_repeat Simple_repeat 1 70 0 200 206 65 0 chr17 88840158 88840228 -664325 - MIR SINE MIR -30 178 101 258 183 254 0 chr17 88841134 88841205 -663348 - MER81 DNA DNA -24 90 2 203 171 0 0 chr17 88841421 88841462 -663091 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1998 125 3 3 chr17 88842269 88842557 -661996 + AluSx SINE Alu 1 288 -24 407 19 19 0 chr17 88842566 88842618 -661935 + (GA)n Simple_repeat Simple_repeat 2 54 0 1542 161 3 86 chr17 88842633 88842957 -661596 + AluJo SINE Alu 1 297 -15 2219 98 13 7 chr17 88843472 88843779 -660774 + AluSq SINE Alu 1 309 -4 1007 163 0 0 chr17 88843792 88843952 -660601 + AluJb SINE Alu 147 306 -6 1641 108 17 4 chr17 88843956 88844196 -660357 + AluSx SINE Alu 1 243 -69 25 75 0 0 chr17 88844910 88844963 -659590 + AT_rich Low_complexity Low_complexity 1 53 0 720 162 29 6 chr17 88845073 88845246 -659307 + C-rich Low_complexity Low_complexity 3 179 0 1719 204 0 0 chr17 88845414 88845722 -658831 - AluJo SINE Alu -4 308 1 257 306 111 0 chr17 88845738 88845846 -658707 - L1MB5 LINE L1 0 6174 6055 2186 104 0 19 chr17 88845850 88846157 -658396 + AluSg SINE Alu 2 302 -8 1373 159 18 0 chr17 88850099 88850325 -654228 + AluJo SINE Alu 59 288 -24 1866 112 0 106 chr17 88850391 88850730 -653823 + AluSg1 SINE Alu 1 303 -6 813 177 0 8 chr17 88851201 88851331 -653222 + FLAM_C SINE Alu 1 129 -4 847 189 26 13 chr17 88851765 88851918 -652635 - AluJb SINE Alu -22 290 136 194 231 108 0 chr17 88852204 88852269 -652284 - L2 LINE L2 -57 3256 3185 589 221 69 97 chr17 88852570 88852648 -651905 - MER33 DNA MER1_type -2267 318 239 2229 85 26 13 chr17 88852648 88852953 -651600 + AluSx SINE Alu 1 309 -3 1900 130 0 26 chr17 88852958 88853265 -651288 - AluJo SINE Alu -13 299 1 589 221 69 97 chr17 88853265 88853380 -651173 - MER33 DNA MER1_type -2350 235 127 2438 45 0 32 chr17 88853380 88853688 -650865 - AluSg SINE Alu -12 298 1 589 221 69 97 chr17 88853688 88853777 -650776 - MER33 DNA MER1_type -2458 127 37 2184 110 0 0 chr17 88855183 88855482 -649071 + AluSx SINE Alu 2 300 -12 2056 119 11 0 chr17 88855485 88855771 -648782 + AluSx SINE Alu 1 289 -23 2204 119 0 0 chr17 88855772 88856084 -648469 + AluSx SINE Alu 1 312 0 1187 175 123 36 chr17 88856084 88856416 -648137 + MER72 LTR ERV1 13 373 -349 213 94 0 0 chr17 88856416 88856448 -648105 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 805 126 8 0 chr17 88856448 88856567 -647986 - FLAM_C SINE Alu -23 120 1 1869 166 29 3 chr17 88856567 88856916 -647637 + MER72 LTR ERV1 365 722 0 1971 135 7 0 chr17 88857170 88857477 -647076 + AluSq SINE Alu 1 309 0 578 273 186 11 chr17 88857766 88858121 -646432 + MLT1C LTR MaLR 7 423 -44 2355 46 0 16 chr17 88858907 88859210 -645343 - AluY SINE Alu -13 298 1 261 111 0 0 chr17 88860842 88860887 -643666 - Alu SINE Alu -254 46 2 415 340 75 10 chr17 88861232 88861538 -643015 - L1MC4 LINE L1 -622 7420 7095 1019 82 0 0 chr17 88861554 88861688 -642865 + Alu SINE Alu 169 302 -8 1971 120 0 28 chr17 88861696 88861987 -642566 + AluSc SINE Alu 1 283 -26 399 206 60 11 chr17 88861988 88862114 -642439 - L1MC4 LINE L1 -949 7046 6900 674 230 81 19 chr17 88862153 88862314 -642239 + FAM SINE Alu 1 171 -4 215 250 21 0 chr17 88862314 88862362 -642191 + GA-rich Low_complexity Low_complexity 3 51 0 1331 91 0 0 chr17 88862391 88862566 -641987 - AluSc SINE Alu -5 304 130 198 0 0 0 chr17 88862567 88862589 -641964 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2371 60 0 0 chr17 88862589 88862872 -641681 - AluY SINE Alu -28 283 1 195 42 0 0 chr17 88863099 88863123 -641430 + (CTG)n Simple_repeat Simple_repeat 1 24 0 906 189 0 0 chr17 88863196 88863376 -641177 + (TCTG)n Simple_repeat Simple_repeat 1 180 0 380 181 12 0 chr17 88863373 88863456 -641097 + (CCTG)n Simple_repeat Simple_repeat 4 87 0 * 1023 158 0 4 chr17 88863448 88863807 -640746 + (TCTG)n Simple_repeat Simple_repeat 1 537 0 205 277 62 0 chr17 88864092 88864157 -640396 - MIR SINE MIR -130 132 64 306 73 0 0 chr17 88864831 88864872 -639681 + (CCCTG)n Simple_repeat Simple_repeat 5 45 0 28 29 0 0 chr17 88867373 88867408 -637145 + GC_rich Low_complexity Low_complexity 1 35 0 1269 169 11 15 chr17 88870273 88870533 -634020 - AluSx SINE Alu -14 298 40 438 39 0 0 chr17 88870533 88870584 -633969 - AluSg/x SINE Alu -106 204 154 550 236 115 67 chr17 88870810 88870928 -633625 + HAL1 LINE L1 1883 1994 -513 2424 81 0 0 chr17 88870928 88871236 -633317 + AluSx SINE Alu 1 308 -4 550 236 115 67 chr17 88871236 88871448 -633105 + HAL1 LINE L1 1994 2229 -278 2096 66 33 0 chr17 88871563 88871865 -632688 + AluY SINE Alu 1 311 0 231 287 70 35 chr17 88872168 88872283 -632270 + L2 LINE L2 2204 2322 -992 254 256 104 0 chr17 88872295 88872420 -632133 + L2 LINE L2 2576 2713 -601 286 274 57 0 chr17 88872425 88872531 -632022 + L1MC5 LINE L1 7315 7426 -535 259 287 139 41 chr17 88872750 88872872 -631681 + MIR SINE MIR 103 236 -26 217 224 0 0 chr17 88874142 88874191 -630362 + C-rich Low_complexity Low_complexity 2 50 0 2331 107 0 0 chr17 88874627 88874937 -629616 - AluSg SINE Alu 0 310 1 1062 96 0 0 chr17 88874937 88875072 -629481 - AluSg SINE Alu -175 135 1 219 69 0 0 chr17 88875929 88875958 -628595 + (A)n Simple_repeat Simple_repeat 1 29 0 21 21 0 64 chr17 88879596 88879643 -624910 + GC_rich Low_complexity Low_complexity 1 44 0 261 341 99 68 chr17 88880522 88880774 -623779 - L2 LINE L2 -94 3178 2919 2278 99 0 0 chr17 88880865 88881168 -623385 + AluSg SINE Alu 2 304 -6 211 143 0 71 chr17 88886071 88886127 -618426 + (CGGGGG)n Simple_repeat Simple_repeat 2 53 0 287 244 24 128 chr17 88893845 88893928 -610625 + MIR SINE MIR 60 119 -143 2005 125 3 3 chr17 88893928 88894232 -610321 - AluY SINE Alu -7 304 1 287 244 24 128 chr17 88894232 88894312 -610241 + MIR SINE MIR 119 206 -56 2365 232 30 32 chr17 88894890 88895474 -609079 + L1MB5 LINE L1 5440 6024 -150 1812 139 73 0 chr17 88895474 88895761 -608792 - AluSx SINE Alu -4 308 1 2365 232 30 32 chr17 88895761 88895841 -608712 + L1MB5 LINE L1 6024 6103 -71 2077 99 13 26 chr17 88895857 88896159 -608394 - AluSq SINE Alu -11 302 5 809 127 0 32 chr17 88896189 88896315 -608238 + FLAM_C SINE Alu 3 124 -19 338 257 14 0 chr17 88896560 88896634 -607919 + MIR SINE MIR 114 188 -74 29 0 0 0 chr17 88898604 88898633 -605920 + GC_rich Low_complexity Low_complexity 1 29 0 896 127 15 0 chr17 88898774 88898908 -605645 + AluSx SINE Alu 1 136 -177 1164 137 0 16 chr17 88898936 88899126 -605427 + AluSx SINE Alu 121 307 -5 1650 170 7 10 chr17 88899297 88899603 -604950 - AluJb SINE Alu -7 305 1 872 171 0 0 chr17 88900427 88900573 -603980 + AluSx SINE Alu 135 280 -32 1191 112 0 0 chr17 88900576 88900755 -603798 + (TA)n Simple_repeat Simple_repeat 2 180 0 907 138 125 0 chr17 88900822 88900974 -603579 - AluJo/FRAM SINE Alu -8 304 134 2221 85 0 20 chr17 88900974 88901279 -603274 - AluY SINE Alu -12 299 1 2138 106 7 0 chr17 88901281 88901574 -602979 - AluSg SINE Alu -15 295 1 246 284 0 0 chr17 88901575 88901649 -602904 - L1MC4a LINE L1 -1785 6023 5950 2163 100 0 20 chr17 88901676 88901977 -602576 - AluSx SINE Alu -12 300 6 1788 183 41 23 chr17 88902121 88902520 -602033 + MLT2B2 LTR ERVL 1 393 -122 691 140 53 27 chr17 88902627 88902718 -601835 + MLT2B2 LTR ERVL 362 460 -55 1582 119 0 0 chr17 88902718 88902937 -601616 - AluSg/x SINE Alu -13 297 79 691 140 53 27 chr17 88902937 88902995 -601558 + MLT2B2 LTR ERVL 460 515 0 359 310 21 45 chr17 88903012 88903254 -601299 + L1MC4a LINE L1 6277 6512 -1296 2160 118 0 13 chr17 88903305 88903619 -600934 + AluSx SINE Alu 1 310 -2 2501 72 0 0 chr17 88903621 88903928 -600625 + AluY SINE Alu 3 309 -2 766 223 53 6 chr17 88903960 88904192 -600361 + L1MC4a LINE L1 6508 6859 -1037 305 230 0 112 chr17 88904260 88904343 -600210 + L1MC4 LINE L1 7735 7795 -247 2128 129 0 0 chr17 88904343 88904646 -599907 - AluSx SINE Alu -7 305 3 305 230 0 112 chr17 88904646 88904714 -599839 + L1MC4 LINE L1 7795 7869 -173 803 157 0 0 chr17 88904714 88904829 -599724 - AluJb SINE Alu -84 228 114 21 0 0 0 chr17 88907350 88907371 -597182 + GC_rich Low_complexity Low_complexity 1 21 0 1913 170 46 25 chr17 88908372 88908903 -595650 + MLT2A2 LTR ERVL 1 547 -7 628 149 124 8 chr17 88911912 88912033 -592520 + AluJo SINE Alu 1 135 -177 1738 151 7 30 chr17 88912047 88912345 -592208 + AluJo SINE Alu 4 294 -18 2071 126 0 40 chr17 88912394 88912529 -592024 + AluSx SINE Alu 1 140 -172 2271 104 0 3 chr17 88912529 88912838 -591715 + AluSc SINE Alu 1 308 -1 2071 126 0 40 chr17 88912838 88913027 -591526 + AluSx SINE Alu 140 312 0 520 161 0 0 chr17 88913058 88913139 -591414 + FLAM_A SINE Alu 33 113 -29 2220 106 0 3 chr17 88913388 88913689 -590864 - AluSq SINE Alu -13 300 1 932 120 0 0 chr17 88913693 88913826 -590727 - AluSq/x SINE Alu -180 133 1 1566 138 4 0 chr17 88913908 88914140 -590413 - AluSc SINE Alu -76 233 1 509 160 0 0 chr17 88914140 88914215 -590338 - AluSc SINE Alu -229 80 6 533 127 0 0 chr17 88914215 88914294 -590259 - AluSc SINE Alu -225 84 6 2225 92 16 3 chr17 88914481 88914786 -589767 + AluSp SINE Alu 5 313 0 2162 125 0 0 chr17 88914810 88915122 -589431 + AluSp SINE Alu 1 312 -1 493 223 11 0 chr17 88915449 88915543 -589010 + FLAM_A SINE Alu 23 117 -25 1520 155 116 0 chr17 88915554 88915831 -588722 - AluSx SINE Alu -3 309 1 847 138 0 0 chr17 88915942 88916072 -588481 + FLAM_C SINE Alu 12 141 -2 1100 146 42 47 chr17 88916248 88916306 -588247 + AluJo SINE Alu 88 145 -167 1720 104 90 8 chr17 88916306 88916436 -588117 + AluSx SINE Alu 9 127 -185 1822 95 0 4 chr17 88916436 88916678 -587875 + AluSg SINE Alu 1 241 -69 1720 104 90 8 chr17 88916678 88916815 -587738 + AluSx SINE Alu 127 298 -14 1100 146 42 47 chr17 88916815 88916969 -587584 + AluJo SINE Alu 145 299 -13 2252 94 7 0 chr17 88917005 88917303 -587250 + AluSx SINE Alu 1 300 -12 1897 112 21 3 chr17 88917349 88917636 -586917 - AluJb SINE Alu -20 292 1 34 79 0 0 chr17 88918620 88918696 -585857 + GC_rich Low_complexity Low_complexity 1 76 0 21 89 0 0 chr17 88918824 88918880 -585673 + GC_rich Low_complexity Low_complexity 1 56 0 231 36 0 0 chr17 88922122 88922150 -582403 + (T)n Simple_repeat Simple_repeat 1 28 0 2209 84 7 0 chr17 88922860 88923146 -581407 + AluSq SINE Alu 1 288 -25 1656 172 0 0 chr17 88923161 88923423 -581130 + AluJb SINE Alu 16 277 -35 1040 133 0 6 chr17 88925070 88925228 -579325 + AluSp SINE Alu 143 299 -14 2041 126 7 3 chr17 88925925 88926235 -578318 - AluY SINE Alu 0 311 1 2434 53 0 3 chr17 88926240 88926544 -578009 - AluY SINE Alu -8 303 1 1295 175 15 133 chr17 88926547 88926879 -577674 - AluJo SINE Alu -7 295 3 2322 93 0 0 chr17 88926886 88927197 -577356 - AluY SINE Alu 0 311 1 1680 180 111 3 chr17 88927207 88927641 -576912 - L1MB7 LINE L1 -320 5864 5377 2336 89 0 19 chr17 88927649 88927964 -576589 - AluSg SINE Alu -1 309 1 2288 84 0 0 chr17 88928241 88928537 -576016 + AluY SINE Alu 1 296 -15 1673 165 7 0 chr17 88928629 88928908 -575645 - AluJo SINE Alu -26 286 6 2336 227 144 43 chr17 88928991 88929088 -575465 - L1MC4a LINE L1 -303 7505 7419 2157 113 0 3 chr17 88929088 88929398 -575155 - AluSg SINE Alu -1 309 1 2336 227 144 43 chr17 88929398 88929634 -574919 - L1MC4a LINE L1 -389 7419 7208 2090 111 7 3 chr17 88929634 88929931 -574622 - AluSx SINE Alu -14 298 1 2336 227 144 43 chr17 88929931 88930079 -574474 - L1MC4a LINE L1 -600 7208 7076 1791 145 48 3 chr17 88930079 88930369 -574184 - AluJb SINE Alu -9 303 1 2336 227 144 43 chr17 88930369 88931105 -573448 - L1MC4a LINE L1 -732 7076 6162 385 214 79 96 chr17 88931558 88931787 -572766 + L1MC5 LINE L1 6932 7156 -805 1046 141 12 6 chr17 88931787 88931957 -572596 + AluSg/x SINE Alu 130 300 -12 2432 71 7 0 chr17 88932534 88932843 -571710 + AluY SINE Alu 1 311 0 865 166 49 0 chr17 88932944 88933107 -571446 + AluJb SINE Alu 121 291 -21 645 216 43 0 chr17 88933212 88933328 -571225 + FLAM_A SINE Alu 1 121 -12 2060 95 17 14 chr17 88933336 88933632 -570921 + AluSc SINE Alu 1 297 -12 2111 127 0 0 chr17 88933643 88933942 -570611 + AluSg SINE Alu 1 299 -11 1108 135 0 24 chr17 88934060 88934073 -570480 - AluJb SINE Alu -21 291 279 1989 131 13 3 chr17 88934073 88934379 -570174 - AluSx SINE Alu -3 309 1 2049 132 3 3 chr17 88934379 88934683 -569870 - AluSq SINE Alu -8 305 2 1108 135 0 24 chr17 88934683 88934838 -569715 - AluJb SINE Alu -31 281 126 2161 102 0 3 chr17 88934867 88935161 -569392 - AluSq SINE Alu -20 293 1 455 269 67 38 chr17 88935161 88935399 -569154 + L1ME LINE L1 4843 5087 -1059 755 177 35 14 chr17 88935400 88935541 -569012 - AluJb SINE Alu -21 291 148 497 224 234 63 chr17 88935554 88935642 -568911 + L1ME LINE L1 5144 5216 -950 2039 135 0 3 chr17 88935642 88935939 -568614 - AluSp SINE Alu -17 296 1 497 224 234 63 chr17 88935939 88936405 -568148 + L1ME LINE L1 5216 5797 -369 210 37 0 0 chr17 88936407 88936434 -568119 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2265 57 0 0 chr17 88936435 88936714 -567839 - AluY SINE Alu -32 279 1 2096 136 3 0 chr17 88937113 88937421 -567132 + AluJo SINE Alu 1 309 -3 2049 130 7 0 chr17 88937431 88937731 -566822 + AluSx SINE Alu 10 311 -1 220 134 0 45 chr17 88938808 88938875 -565678 + (CGGGGG)n Simple_repeat Simple_repeat 3 66 0 2294 89 0 0 chr17 88938980 88939271 -565282 - AluSx SINE Alu -17 295 5 229 226 21 43 chr17 88939692 88939785 -564768 - L1MC/D LINE L1 -2104 5704 5614 1637 171 7 7 chr17 88939793 88940080 -564473 + AluJb SINE Alu 15 301 -11 2091 126 0 0 chr17 88940082 88940368 -564185 + AluSx SINE Alu 1 286 -26 181 250 0 0 chr17 88940492 88940532 -564021 - MIR SINE MIR -89 173 134 1029 90 0 0 chr17 88940532 88940665 -563888 + AluSq/x SINE Alu 1 133 -180 2175 88 0 3 chr17 88940677 88940984 -563569 + AluY SINE Alu 1 306 0 2159 127 0 0 chr17 88942307 88942614 -561939 + AluSg SINE Alu 1 307 -3 457 227 9 9 chr17 88942637 88942747 -561806 + L1MC3 LINE L1 6685 6794 -991 390 166 13 119 chr17 88942770 88942921 -561632 - MER21A LTR ERV1 -20 911 777 623 229 7 0 chr17 88943012 88943155 -561398 - MER21B LTR ERV1 -109 754 611 723 221 77 0 chr17 88943155 88943350 -561203 + MER2 DNA MER2_type 1 210 -135 1937 142 0 19 chr17 88943362 88943678 -560875 - AluSx SINE Alu -2 310 1 2426 74 0 3 chr17 88943689 88944001 -560552 - AluY SINE Alu 0 311 1 2197 92 3 0 chr17 88944001 88944295 -560258 - AluSx SINE Alu -17 295 1 1395 236 126 27 chr17 88944371 88944483 -560070 - MER21B LTR ERV1 -254 609 509 1803 195 0 10 chr17 88944483 88944650 -559903 - AluJb SINE Alu -2 300 136 1930 151 0 23 chr17 88944650 88944815 -559738 - AluSx SINE Alu -14 298 142 2435 64 0 0 chr17 88944815 88945110 -559443 - AluY SINE Alu -16 295 1 1930 151 0 23 chr17 88945110 88945249 -559304 - AluSx SINE Alu -170 142 1 1803 195 0 10 chr17 88945249 88945384 -559169 - AluJb SINE Alu -166 136 1 1395 236 126 27 chr17 88945384 88945787 -558766 - MER21B LTR ERV1 -354 509 43 366 203 0 0 chr17 88945791 88945860 -558693 - MER21B LTR ERV1 -775 88 20 1834 91 84 40 chr17 88945947 88946245 -558308 - AluY SINE Alu 0 311 1 2129 92 0 17 chr17 88946246 88946540 -558013 - AluSc SINE Alu -20 289 1 239 293 0 0 chr17 88946582 88946657 -557896 + L1ME4a LINE L1 5978 6052 -69 2535 61 0 0 chr17 88946665 88946976 -557577 + AluY SINE Alu 1 311 0 2321 84 0 0 chr17 88946999 88947295 -557258 + AluY SINE Alu 1 296 -15 231 36 0 0 chr17 88947371 88947399 -557154 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 850 113 0 0 chr17 88947400 88947515 -557038 + AluJb SINE Alu 179 293 -19 1961 91 62 7 chr17 88947517 88947791 -556762 + AluSg SINE Alu 1 289 -21 2418 76 0 6 chr17 88952245 88952560 -551993 - AluSq SINE Alu 0 313 1 2591 36 0 0 chr17 88953833 88954137 -550416 + AluY SINE Alu 1 304 -7 183 292 0 0 chr17 88956502 88956550 -548003 - MIR SINE MIR -164 98 51 460 195 23 158 chr17 88957882 88958097 -546456 - MLT2D LTR ERVL -228 186 1 1652 159 30 10 chr17 88959669 88959970 -544583 - AluJo SINE Alu -5 307 1 27 49 0 0 chr17 88963392 88963433 -541120 + GC_rich Low_complexity Low_complexity 1 41 0 23 54 0 0 chr17 88963682 88963719 -540834 + GC_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr17 88963745 88963787 -540766 + GC_rich Low_complexity Low_complexity 1 42 0 2045 72 54 0 chr17 88965717 88965995 -538558 - AluSc SINE Alu 0 309 17 2220 92 3 3 chr17 88966556 88966849 -537704 + AluSx SINE Alu 1 293 -19 402 88 35 0 chr17 88966865 88966922 -537631 + AluJb SINE Alu 83 141 -171 1909 144 0 36 chr17 88966922 88967057 -537496 + AluJo SINE Alu 1 139 -173 2312 85 0 7 chr17 88967057 88967364 -537189 + AluSg SINE Alu 1 305 -5 2163 96 10 10 chr17 88967368 88967670 -536883 + AluSq SINE Alu 2 303 -10 1909 144 0 36 chr17 88967670 88967835 -536718 + AluJo SINE Alu 142 295 -17 1666 182 7 3 chr17 88967836 88968133 -536420 + AluJb SINE Alu 1 298 -14 2061 101 17 3 chr17 88969152 88969440 -535113 - AluSc SINE Alu -17 292 1 1812 147 0 17 chr17 88969449 88969748 -534805 - AluJb SINE Alu -18 294 1 2396 59 0 7 chr17 88970402 88970705 -533848 - AluY SINE Alu -1 310 10 1718 178 7 3 chr17 88971811 88972104 -532449 - AluJb SINE Alu -18 294 1 2375 58 3 0 chr17 88972775 88973067 -531486 + AluY SINE Alu 1 293 -18 833 169 15 0 chr17 88973079 88973215 -531338 + FLAM_C SINE Alu 3 140 -3 1912 125 3 21 chr17 88973222 88973542 -531011 + AluSp SINE Alu 1 315 0 2176 94 3 13 chr17 88973571 88973870 -530683 + AluSp SINE Alu 3 298 -15 2290 105 0 0 chr17 88973877 88974182 -530371 + AluSq SINE Alu 1 305 -8 252 387 24 0 chr17 88974347 88974471 -530082 - Charlie1b DNA MER1_type -16 507 381 2163 112 3 3 chr17 88974487 88974792 -529761 - AluSx SINE Alu -7 305 1 825 156 52 0 chr17 88974793 88974928 -529625 - AluJb SINE Alu -38 274 133 2213 118 0 3 chr17 88974928 88975241 -529312 - AluSx SINE Alu 0 312 1 2352 80 0 0 chr17 88975241 88975541 -529012 - AluSq SINE Alu -4 309 10 335 161 98 9 chr17 88975547 88975659 -528894 - Charlie1b DNA MER1_type -148 375 254 299 277 78 63 chr17 88975663 88975804 -528749 - Charlie1b DNA MER1_type -2544 217 80 2256 71 14 0 chr17 88975804 88976100 -528453 + AluY SINE Alu 1 300 -11 1489 114 9 18 chr17 88976100 88976327 -528226 + AluSg/x SINE Alu 79 303 -9 299 277 78 63 chr17 88976327 88976390 -528163 - Charlie1b DNA MER1_type -2680 81 9 256 211 18 0 chr17 88978584 88978641 -525912 - FLAM SINE Alu -2 131 74 1093 133 64 0 chr17 88981308 88981496 -523057 + AluJb SINE Alu 92 291 -21 2025 99 18 0 chr17 88981578 88981862 -522691 - AluY SINE Alu -22 289 1 2153 117 3 0 chr17 88983334 88983633 -520920 - AluSx SINE Alu -12 300 1 1783 153 0 7 chr17 88983702 88983983 -520570 - AluJo SINE Alu -17 295 17 2392 57 0 0 chr17 88984032 88984330 -520223 + AluY SINE Alu 1 298 -13 2238 92 0 16 chr17 88985351 88985668 -518885 - AluSx SINE Alu 0 312 1 739 161 16 16 chr17 88985677 88985801 -518752 - FLAM_C SINE Alu -9 124 1 1739 199 97 19 chr17 88986002 88986368 -518185 + MLT1C LTR MaLR 3 339 -128 2153 94 3 19 chr17 88986368 88986538 -518015 - AluSx SINE Alu -8 304 133 2292 83 3 3 chr17 88986538 88986839 -517714 - AluY SINE Alu -10 301 1 2385 46 0 40 chr17 88986839 88987141 -517412 - AluY SINE Alu -21 290 1 2153 94 3 19 chr17 88987141 88987278 -517275 - AluSx SINE Alu -177 135 1 1739 199 97 19 chr17 88987278 88987342 -517211 + MLT1C LTR MaLR 339 467 0 2115 116 0 7 chr17 88987557 88987858 -516695 + AluSg SINE Alu 1 299 -11 2203 46 0 0 chr17 88988189 88988452 -516101 - AluY SINE Alu -4 307 45 1896 92 71 20 chr17 88989612 88989906 -514647 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr17 88990281 88990310 -514243 + GC_rich Low_complexity Low_complexity 1 29 0 259 141 31 0 chr17 88990745 88990809 -513744 + (CGGGG)n Simple_repeat Simple_repeat 2 67 0 26 0 0 0 chr17 88990859 88990885 -513668 + GC_rich Low_complexity Low_complexity 1 26 0 195 42 0 0 chr17 88992568 88992592 -511961 + (T)n Simple_repeat Simple_repeat 1 24 0 1673 143 0 60 chr17 88992621 88992804 -511749 - AluSx SINE Alu 0 309 151 2240 95 0 20 chr17 88992804 88993110 -511443 - AluSx SINE Alu -12 300 1 1673 143 0 60 chr17 88993110 88993253 -511300 - AluSx SINE Alu -158 151 1 290 116 348 14 chr17 88993253 88993322 -511231 - FLAM_C SINE Alu -17 116 25 2333 90 0 0 chr17 88993338 88993639 -510914 - AluSq SINE Alu -12 301 1 440 281 15 7 chr17 88994330 88994465 -510088 - MER104 DNA Tc2 -14 166 31 243 140 70 35 chr17 88995466 88995523 -509030 - L1ME LINE L1 -503 5667 5609 2147 101 0 0 chr17 88995913 88996226 -508327 + AluY SINE Alu 1 311 0 641 143 0 0 chr17 88996227 88996318 -508235 - AluJb SINE Alu -201 111 21 2368 81 0 0 chr17 88996349 88996646 -507907 - AluSg SINE Alu -13 297 1 2244 84 7 0 chr17 88996646 88996944 -507609 - AluSx SINE Alu -10 302 3 978 164 6 0 chr17 88996946 88997105 -507448 - AluJb SINE Alu -15 297 138 207 0 0 0 chr17 88997235 88997258 -507295 + (TG)n Simple_repeat Simple_repeat 1 23 0 194 281 18 18 chr17 88998423 88998480 -506073 - MIR SINE MIR -113 149 93 1506 149 49 24 chr17 89002284 89002596 -501957 - AluSg SINE Alu 0 310 1 708 238 104 51 chr17 89202715 89203041 -301512 - L1ME3A LINE L1 -152 6081 5746 2133 116 10 3 chr17 89203060 89203353 -301200 - AluSx SINE Alu -11 301 7 549 246 98 25 chr17 89203354 89203580 -300973 - L1ME3A LINE L1 -557 5682 5433 2286 109 0 3 chr17 89203592 89203895 -300658 - AluSx SINE Alu -10 302 1 1033 95 0 34 chr17 89204409 89204557 -299996 - AluYb8 SINE Alu -175 143 1 760 289 13 63 chr17 89204568 89204730 -299823 - L1ME3A LINE L1 -4764 1632 1463 2440 75 3 0 chr17 89204730 89205023 -299530 - AluSp SINE Alu -19 294 1 760 289 13 63 chr17 89205023 89205493 -299060 - L1ME3A LINE L1 -4933 1463 1032 240 286 152 42 chr17 89205682 89205899 -298654 + Charlie2 DNA MER1_type 2028 2268 -594 27 29 0 0 chr17 89206090 89206124 -298429 + AT_rich Low_complexity Low_complexity 1 34 0 1731 74 0 48 chr17 89206891 89207121 -297432 + AluSx SINE Alu 1 219 -93 712 103 0 0 chr17 89207121 89207218 -297335 + AluSp/q SINE Alu 188 284 -29 305 224 99 112 chr17 89207229 89207390 -297163 + L1MC4 LINE L1 6556 6714 -1328 2368 93 3 0 chr17 89207556 89207858 -296695 + AluSg SINE Alu 1 303 -7 2013 133 3 14 chr17 89208265 89208558 -295995 + AluSx SINE Alu 1 290 -22 2227 93 23 0 chr17 89208791 89209092 -295461 - AluSq SINE Alu -5 308 1 830 182 0 0 chr17 89209281 89209413 -295140 - FLAM_C SINE Alu -11 132 1 2327 103 3 0 chr17 89210057 89210357 -294196 - AluSx SINE Alu -11 301 1 2099 117 35 3 chr17 89210393 89210683 -293870 - AluSg SINE Alu -11 299 1 601 220 8 0 chr17 89210687 89210840 -293713 - FLAM_A SINE Alu 0 154 1 294 93 0 0 chr17 89210936 89210979 -293574 + MSTB LTR MaLR 330 372 -54 2133 182 54 28 chr17 89210993 89211040 -293513 + L1M3 LINE L1 4810 4854 -1329 2284 95 7 0 chr17 89211040 89211335 -293218 - AluSp SINE Alu -16 297 1 2133 182 54 28 chr17 89211335 89212155 -292398 + L1M3 LINE L1 4854 5689 -494 474 178 17 17 chr17 89212256 89212374 -292179 + AluY SINE Alu 180 297 -14 216 0 0 0 chr17 89212464 89212488 -292065 + (T)n Simple_repeat Simple_repeat 1 24 0 579 197 33 0 chr17 89212542 89212664 -291889 - AluJo/FRAM SINE Alu -5 307 182 372 158 0 0 chr17 89212665 89212722 -291831 + AluJo/FRAM SINE Alu 204 260 -42 2459 74 0 22 chr17 89212781 89213093 -291460 - AluY SINE Alu -6 305 1 2194 100 7 10 chr17 89213226 89213516 -291037 - AluSc SINE Alu -20 289 1 2216 108 3 23 chr17 89213894 89214199 -290354 - AluSp SINE Alu -14 299 1 1854 122 22 4 chr17 89214341 89214612 -289941 - AluSx SINE Alu -36 276 1 1295 90 11 6 chr17 89215403 89215580 -288973 - AluSg/x SINE Alu -15 297 120 2114 121 3 37 chr17 89215580 89215902 -288651 - AluSx SINE Alu -1 311 1 24 0 0 0 chr17 89216391 89216415 -288138 + AT_rich Low_complexity Low_complexity 1 24 0 753 291 119 3 chr17 89216645 89216930 -287623 + MER46C DNA MER2_type 2 319 -19 1732 149 69 7 chr17 89217160 89217297 -287256 + AluJo SINE Alu 1 128 -184 2618 60 0 0 chr17 89217297 89217598 -286955 + AluY SINE Alu 1 301 -10 1732 149 69 7 chr17 89217598 89217748 -286805 + AluJo SINE Alu 128 306 -6 537 179 0 17 chr17 89218013 89218130 -286423 + FRAM SINE Alu 57 171 -5 1434 164 35 4 chr17 89218398 89218630 -285923 - AluJb SINE Alu -73 239 1 550 177 0 81 chr17 89218754 89218901 -285652 + FLAM_C SINE Alu 2 138 0 2415 75 7 13 chr17 89218911 89219218 -285335 + AluSq SINE Alu 5 309 -4 682 150 8 31 chr17 89219322 89219449 -285104 - AluJb SINE Alu -187 125 2 2229 119 6 3 chr17 89219478 89219790 -284763 + AluSq SINE Alu 1 313 0 1093 101 207 0 chr17 89219975 89220163 -284390 + MER30 DNA MER1_type 4 230 0 23 33 0 0 chr17 89220254 89220284 -284269 + AT_rich Low_complexity Low_complexity 1 30 0 1876 249 83 50 chr17 89220310 89221289 -283264 - L1ME1 LINE L1 -3 6163 5176 500 310 58 0 chr17 89222529 89222603 -281950 - MER45C DNA AcHobo -629 952 884 1629 169 47 4 chr17 89222603 89222881 -281672 + AluJb SINE Alu 1 290 -22 500 310 58 0 chr17 89222881 89222980 -281573 - MER45C DNA AcHobo -697 884 769 524 184 46 0 chr17 89223075 89223184 -281369 - MER45C DNA AcHobo -794 159 46 2507 50 3 7 chr17 89223185 89223485 -281068 - AluY SINE Alu -12 299 1 676 212 109 0 chr17 89223485 89223650 -280903 + AluJo SINE Alu 115 297 -15 1689 170 24 17 chr17 89223650 89223939 -280614 + AluJo SINE Alu 1 291 -21 490 226 44 75 chr17 89224073 89224232 -280321 + LTR8A LTR ERV1 570 723 -4 1721 146 11 0 chr17 89224236 89224517 -280036 - MER72 LTR ERV1 -4 718 435 1431 188 78 3 chr17 89224514 89224822 -279731 - MER72 LTR ERV1 -386 537 1 * 2209 100 10 16 chr17 89226609 89226920 -277633 + AluSx SINE Alu 1 309 -3 2250 122 0 0 chr17 89227211 89227498 -277055 + AluSx SINE Alu 4 290 -22 2318 82 0 0 chr17 89227508 89227789 -276764 + AluY SINE Alu 1 281 -30 484 184 18 18 chr17 89227928 89228042 -276511 - AluY SINE Alu -1 310 197 2284 103 3 0 chr17 89228533 89228825 -275728 + AluSx SINE Alu 1 293 -19 269 311 24 55 chr17 89229177 89229341 -275212 + MIR SINE MIR 33 191 -71 260 226 19 0 chr17 89230168 89230221 -274332 + MER5A DNA MER1_type 48 101 -88 333 250 86 0 chr17 89230463 89230579 -273974 - L2 LINE L2 -5 3308 3183 1676 151 187 11 chr17 89232146 89232510 -272043 - MSTA LTR MaLR 0 428 1 1423 149 87 51 chr17 89232784 89233059 -271494 - AluJb SINE Alu -19 293 9 2210 140 0 0 chr17 89233645 89233952 -270601 - AluSx SINE Alu -5 307 1 810 132 0 0 chr17 89234086 89234192 -270361 - AluSq/x SINE Alu -207 106 1 2107 128 0 0 chr17 89234258 89234546 -270007 - AluSx SINE Alu -24 288 1 644 94 0 0 chr17 89234675 89234771 -269782 - AluSg/x SINE Alu 0 309 214 2246 78 3 17 chr17 89235889 89236208 -268345 - AluSc SINE Alu 0 309 1 639 189 23 15 chr17 89236255 89236387 -268166 + AluJo SINE Alu 2 134 -178 26 0 0 27 chr17 89236772 89236794 -267759 + AT_rich Low_complexity Low_complexity 1 23 -13 2384 87 3 0 chr17 89236794 89237094 -267459 - AluY SINE Alu -10 301 1 26 0 0 27 chr17 89237094 89237108 -267445 + AT_rich Low_complexity Low_complexity 23 36 0 23 0 0 0 chr17 89237156 89237179 -267374 + AT_rich Low_complexity Low_complexity 1 23 0 2131 113 10 7 chr17 89237181 89237474 -267079 + AluSx SINE Alu 1 294 -18 2502 74 0 0 chr17 89237474 89237772 -266781 + AluY SINE Alu 1 298 -13 2796 32 0 0 chr17 89237812 89238122 -266431 + AluY SINE Alu 2 311 0 2276 124 0 3 chr17 89238522 89238820 -265733 + AluSx SINE Alu 1 297 -15 1360 52 21 26 chr17 89239413 89239606 -264947 + AluY SINE Alu 109 300 -11 710 157 9 0 chr17 89239606 89239721 -264832 - AluJo/FLAM SINE Alu -185 117 2 715 185 15 0 chr17 89241056 89241186 -263367 + AluJo SINE Alu 3 134 -178 2517 67 0 0 chr17 89241294 89241591 -262962 + AluY SINE Alu 1 297 -14 1905 140 39 19 chr17 89241658 89241965 -262588 + AluSq SINE Alu 1 313 0 24 53 0 0 chr17 89241973 89242011 -262542 + AT_rich Low_complexity Low_complexity 1 38 0 934 69 15 0 chr17 89242023 89242154 -262399 - MSTB2 LTR MaLR 0 457 325 2318 110 0 10 chr17 89242154 89242462 -262091 - AluSx SINE Alu -7 305 1 2159 133 0 0 chr17 89242464 89242800 -261753 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 89242801 89242823 -261730 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2285 111 0 0 chr17 89242823 89243111 -261442 - AluSg SINE Alu -22 288 1 862 173 25 0 chr17 89243123 89243285 -261268 - FRAM SINE Alu 0 166 1 1334 219 55 48 chr17 89243290 89243657 -260896 - L1ME LINE L1 -728 5436 5073 2210 109 3 31 chr17 89243657 89243977 -260576 - AluSx SINE Alu -1 311 1 1334 219 55 48 chr17 89243977 89244103 -260450 - L1ME LINE L1 -1091 5073 4949 1847 179 121 24 chr17 89244103 89244140 -260413 + LOR1a LTR ERV1 1 33 -464 180 0 0 0 chr17 89244140 89244160 -260393 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1847 179 121 24 chr17 89244160 89244575 -259978 + LOR1a LTR ERV1 33 497 0 1334 219 55 48 chr17 89244575 89244715 -259838 - L1ME LINE L1 -1215 4949 4796 2344 105 20 0 chr17 89244725 89245029 -259524 - AluSg SINE Alu 0 310 1 2444 89 0 3 chr17 89245031 89245333 -259220 - AluY SINE Alu -10 301 1 366 225 8 54 chr17 89246438 89246567 -257986 - AluJb SINE Alu -167 135 13 1561 166 24 21 chr17 89246597 89246886 -257667 - AluSc SINE Alu -18 291 2 2126 97 7 10 chr17 89246887 89247176 -257377 - AluSq SINE Alu -25 288 1 899 193 50 0 chr17 89247181 89247342 -257211 - AluJb SINE Alu -24 288 120 2253 113 7 3 chr17 89247364 89247673 -256880 + AluSx SINE Alu 1 310 -2 1792 154 4 7 chr17 89247677 89247957 -256596 - AluJo SINE Alu -33 279 1 228 35 0 0 chr17 89250430 89250459 -254094 + (CA)n Simple_repeat Simple_repeat 1 29 0 2222 97 13 3 chr17 89250793 89251092 -253461 + AluSx SINE Alu 1 302 -10 2391 89 7 3 chr17 89251591 89251895 -252658 + AluSp SINE Alu 1 305 -8 1890 159 0 0 chr17 89253102 89253398 -251155 + AluJb SINE Alu 1 296 -16 22 0 0 0 chr17 89253841 89253863 -250690 + GC_rich Low_complexity Low_complexity 1 22 0 1207 216 106 48 chr17 89254167 89254668 -249885 + L1MC5 LINE L1 6880 7409 -552 3711 159 86 27 chr17 89254668 89254850 -249703 + MER4D LTR ERV1 17 187 -716 2385 84 0 3 chr17 89254850 89255160 -249393 + AluY SINE Alu 1 309 -2 3711 159 86 27 chr17 89255160 89255815 -248738 + MER4D LTR ERV1 187 903 0 2063 139 3 0 chr17 89255931 89256232 -248321 - AluSx SINE Alu -10 302 1 8048 87 113 26 chr17 89256294 89257551 -247002 - SVA Other Other -1 1385 20 277 149 110 110 chr17 89257600 89257754 -246799 + L1MC5 LINE L1 7500 7653 -308 1808 136 27 7 chr17 89257765 89258066 -246487 - AluSx SINE Alu -5 307 1 2097 114 0 13 chr17 89258099 89258405 -246148 - AluSq SINE Alu 0 313 12 2290 92 0 0 chr17 89258611 89258903 -245650 - AluSx SINE Alu -17 295 4 1428 186 91 110 chr17 89258926 89258962 -245591 + LTR8A LTR ERV1 1 36 -691 1892 158 13 0 chr17 89258962 89259260 -245293 + AluJb SINE Alu 1 302 -10 1428 186 91 110 chr17 89259260 89259814 -244739 + LTR8A LTR ERV1 36 580 -147 923 76 8 0 chr17 89259817 89259935 -244618 + AluSg SINE Alu 1 119 -191 2098 105 3 0 chr17 89260139 89260425 -244128 - AluSp SINE Alu -9 304 18 353 298 131 32 chr17 89261187 89261439 -243114 + L2 LINE L2 2013 2289 -1025 610 170 0 0 chr17 89261695 89261789 -242764 + AluJ/FLAM SINE Alu 9 102 -210 1207 145 167 4 chr17 89261791 89262019 -242534 - AluJb SINE Alu -44 268 4 253 254 0 0 chr17 89262234 89262301 -242252 + FLAM_A SINE Alu 57 123 -10 574 165 138 0 chr17 89262311 89262420 -242133 + FLAM_C SINE Alu 1 124 -9 2063 108 7 13 chr17 89262430 89262736 -241817 + AluSg SINE Alu 1 304 -6 648 126 9 0 chr17 89262841 89262952 -241601 + MER50 LTR ERV1 492 603 -131 917 145 7 0 chr17 89263544 89263689 -240864 + AluSq/x SINE Alu 1 146 -166 2149 73 31 10 chr17 89263689 89263977 -240576 + AluY SINE Alu 1 294 -17 1807 169 7 23 chr17 89264380 89264687 -239866 - AluJb SINE Alu -10 302 1 1589 178 7 21 chr17 89264785 89265071 -239482 + AluJo SINE Alu 1 282 -30 2099 129 0 3 chr17 89265093 89265404 -239149 + AluSx SINE Alu 1 310 -2 2274 89 10 10 chr17 89265406 89265719 -238834 + AluSp SINE Alu 1 313 0 2162 105 13 19 chr17 89265735 89266049 -238504 + AluSx SINE Alu 1 312 0 324 0 0 0 chr17 89266143 89266179 -238374 + (CCCCAG)n Simple_repeat Simple_repeat 2 37 0 2216 92 0 0 chr17 89266282 89266574 -237979 - AluSg SINE Alu -18 292 1 336 304 8 24 chr17 89266580 89266705 -237848 + L1ME3A LINE L1 6048 6170 0 2310 45 22 32 chr17 89266822 89267134 -237419 - AluY SINE Alu 0 311 3 2198 97 0 13 chr17 89267690 89268000 -236553 + AluSx SINE Alu 1 306 -6 2055 105 0 3 chr17 89268616 89268902 -235651 + AluSc SINE Alu 12 296 -13 2210 103 7 0 chr17 89269502 89269804 -234749 + AluSx SINE Alu 1 304 -8 883 296 203 5 chr17 89269962 89270539 -234014 + L1MC4 LINE L1 7352 8042 0 1979 142 6 16 chr17 89271033 89271344 -233209 - AluSx SINE Alu -4 308 1 2214 100 3 7 chr17 89271388 89271697 -232856 - AluY SINE Alu 0 311 4 259 197 0 16 chr17 89271701 89271762 -232791 - FLAM SINE Alu -4 129 70 772 193 0 15 chr17 89273452 89273587 -230966 - FLAM_A SINE Alu 0 133 1 2626 13 3 0 chr17 89274027 89274326 -230227 - AluYa5 SINE Alu -11 300 1 886 128 0 0 chr17 89278171 89278296 -226257 + FLAM_C SINE Alu 1 125 -18 291 241 101 0 chr17 89279269 89279348 -225205 + MIR SINE MIR 107 193 -69 331 282 26 28 chr17 89279762 89280101 -224452 + C-rich Low_complexity Low_complexity 1 338 0 193 259 0 19 chr17 89282304 89282358 -222195 + MIR SINE MIR 92 144 -118 1398 259 54 29 chr17 89282835 89283119 -221434 + MER41D LTR ERV1 2 304 -253 2180 108 0 3 chr17 89283119 89283414 -221139 - AluSx SINE Alu -18 294 1 1398 259 54 29 chr17 89283414 89283608 -220945 + MER41D LTR ERV1 304 492 -65 1621 180 27 0 chr17 89283867 89284161 -220392 - AluJo SINE Alu -10 302 1 628 176 8 15 chr17 89284974 89285105 -219448 + MER20 DNA MER1_type 26 155 -64 1221 107 6 0 chr17 89285280 89285449 -219104 - AluSg/x SINE Alu -9 303 134 2214 89 14 0 chr17 89285449 89285742 -218811 - AluSx SINE Alu -11 301 5 1513 97 5 0 chr17 89286270 89286476 -218077 + AluSp SINE Alu 1 207 -106 287 58 0 0 chr17 89286476 89286528 -218025 + AluSp SINE Alu 252 303 0 2084 94 3 26 chr17 89286570 89286877 -217676 - AluSx SINE Alu -12 300 1 4620 159 83 38 chr17 89287487 89287906 -216647 - Tigger3b DNA MER2_type -1797 1231 832 1804 120 51 0 chr17 89287906 89288067 -216486 - AluSq SINE Alu -19 294 112 207 0 0 0 chr17 89288067 89288090 -216463 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 1804 120 51 0 chr17 89288090 89288204 -216349 - AluSq SINE Alu -201 112 5 2216 94 3 0 chr17 89288205 89288503 -216050 - AluSq SINE Alu -14 299 1 4620 159 83 38 chr17 89288503 89288646 -215907 - Tigger3b DNA MER2_type -2196 832 697 1830 128 68 0 chr17 89288646 89288927 -215626 - AluSx SINE Alu -12 300 1 4620 159 83 38 chr17 89288927 89289267 -215286 - Tigger3b DNA MER2_type -2331 697 374 2193 83 10 3 chr17 89289267 89289557 -214996 + AluSx SINE Alu 2 293 -19 4620 159 83 38 chr17 89289557 89289812 -214741 - Tigger3b DNA MER2_type -2654 374 18 849 178 0 13 chr17 89289906 89290058 -214495 + AluJb SINE Alu 134 283 -29 874 238 0 24 chr17 89290109 89290319 -214234 + AluJb SINE Alu 95 299 -13 1924 135 3 0 chr17 89290948 89291236 -213317 - AluSx SINE Alu -23 289 1 1413 198 128 34 chr17 89291237 89291794 -212759 - L1M4c LINE L1 -4825 1821 1213 2062 114 20 0 chr17 89291799 89292097 -212456 - AluSp SINE Alu -8 305 2 1022 90 0 0 chr17 89292101 89292234 -212319 - AluSq/x SINE Alu -180 133 1 1182 290 101 30 chr17 89292236 89292947 -211606 - L1M4c LINE L1 -5322 1220 459 23 0 0 0 chr17 89293334 89293357 -211196 + AT_rich Low_complexity Low_complexity 1 23 0 1737 108 97 11 chr17 89293419 89293697 -210856 + AluSg SINE Alu 2 303 -7 1975 116 24 7 chr17 89293697 89293991 -210562 + AluSc SINE Alu 1 299 -10 2146 121 3 0 chr17 89293996 89294294 -210259 + AluSx SINE Alu 1 299 -13 1286 202 16 4 chr17 89294308 89294551 -210002 + AluJb SINE Alu 49 294 -18 237 125 16 31 chr17 89295149 89295194 -209359 + AluS SINE Alu 1 44 -259 245 141 16 31 chr17 89295194 89295239 -209314 + AluS SINE Alu 1 44 -259 279 260 47 41 chr17 89295239 89295408 -209145 + AluSx SINE Alu 1 170 -132 1693 189 3 7 chr17 89295418 89295724 -208829 + AluJo SINE Alu 1 305 -7 2163 112 0 3 chr17 89295736 89296032 -208521 + AluSx SINE Alu 1 295 -17 2181 106 7 0 chr17 89296056 89296349 -208204 + AluSq SINE Alu 5 299 -14 2084 88 32 3 chr17 89297331 89297616 -206937 - AluSg SINE Alu -17 293 1 897 189 0 18 chr17 89297770 89297934 -206619 - AluJo/FRAM SINE Alu -20 292 132 1481 133 4 27 chr17 89297937 89298200 -206353 - AluSx SINE Alu -15 297 41 225 94 0 0 chr17 89298208 89298240 -206313 + (T)n Simple_repeat Simple_repeat 1 32 0 1989 117 3 7 chr17 89298340 89298631 -205922 + AluSx SINE Alu 6 295 -17 972 157 6 6 chr17 89299685 89299844 -204709 + FRAM SINE Alu 1 159 -17 2372 77 0 0 chr17 89300438 89300735 -203818 + AluY SINE Alu 1 297 -14 279 261 0 0 chr17 89302373 89302438 -202115 - Charlie8 DNA MER1_type -2261 156 92 2231 113 0 0 chr17 89302501 89302802 -201751 + AluSx SINE Alu 3 303 -9 902 185 62 62 chr17 89302974 89303185 -201368 + AluJo SINE Alu 1 211 -101 2277 100 3 0 chr17 89303665 89303966 -200587 - AluSg SINE Alu -7 303 2 296 217 19 102 chr17 89304269 89304426 -200127 + Charlie8 DNA MER1_type 41 184 -2233 574 154 162 8 chr17 89305014 89305122 -199431 + AluJo SINE Alu 1 130 -182 2061 104 14 14 chr17 89305122 89305419 -199134 - AluSx SINE Alu -14 298 2 210 37 0 0 chr17 89306505 89306532 -198021 + (GGA)n Simple_repeat Simple_repeat 2 28 0 1972 143 0 3 chr17 89307641 89307934 -196619 - AluJb SINE Alu -15 297 6 1984 107 23 10 chr17 89309019 89309318 -195235 - AluJb SINE Alu -9 303 1 405 0 0 0 chr17 89309338 89309383 -195170 + (GA)n Simple_repeat Simple_repeat 2 46 0 664 0 0 0 chr17 89310009 89310081 -194472 - tRNA-Met-i tRNA tRNA -3 72 1 2357 64 14 0 chr17 89310288 89310584 -193969 + AluSp SINE Alu 1 300 -13 1393 121 91 67 chr17 89310587 89310884 -193669 + AluJo SINE Alu 1 304 -8 433 212 132 17 chr17 89311041 89311220 -193333 - LTR33 LTR ERVL -201 320 94 427 304 103 0 chr17 89313043 89313247 -191306 - MER69 DNA AcHobo -324 2202 1978 580 164 9 0 chr17 89313323 89313433 -191120 - FLAM_C SINE Alu -32 111 1 2422 59 10 3 chr17 89313636 89313939 -190614 + AluSc SINE Alu 1 305 -4 1937 104 21 3 chr17 89314090 89314379 -190174 + AluSx SINE Alu 1 294 -18 267 265 113 7 chr17 89314625 89314776 -189777 - MER69 DNA AcHobo -1139 1387 1221 663 282 110 21 chr17 89314779 89314826 -189727 - MER69 DNA AcHobo -1477 1049 1008 2040 104 7 23 chr17 89314826 89314962 -189591 + AluY SINE Alu 1 138 -173 2253 64 24 0 chr17 89314962 89315259 -189294 + AluY SINE Alu 3 306 -5 2040 104 7 23 chr17 89315259 89315429 -189124 + AluY SINE Alu 138 302 -9 663 282 110 21 chr17 89315429 89315672 -188881 - MER69 DNA AcHobo -1518 1008 733 508 181 21 0 chr17 89316080 89316174 -188379 - FLAM_A SINE Alu -46 96 1 2318 91 0 0 chr17 89316185 89316483 -188070 - AluSx SINE Alu -14 298 1 444 247 137 66 chr17 89316753 89316783 -187770 + L1MB2 LINE L1 5368 5394 -771 1808 151 0 13 chr17 89316783 89317082 -187471 + AluJb SINE Alu 1 295 -17 444 247 137 66 chr17 89317082 89317158 -187395 + L1MB2 LINE L1 5394 5463 -702 2336 78 3 0 chr17 89317158 89317452 -187101 + AluSq SINE Alu 1 295 -18 444 247 137 66 chr17 89317452 89317556 -186997 + L1MB2 LINE L1 5463 5594 -571 607 251 34 6 chr17 89317556 89317731 -186822 - L1MC3 LINE L1 -1009 6776 6597 1048 156 19 61 chr17 89317733 89317945 -186608 - AluJo SINE Alu -5 307 105 2122 75 10 14 chr17 89317945 89318240 -186313 + AluSc SINE Alu 1 294 -15 1586 165 10 39 chr17 89318284 89318593 -185960 - AluJb SINE Alu -3 309 10 2119 120 3 0 chr17 89318601 89318902 -185651 - AluSx SINE Alu -10 302 1 871 149 14 0 chr17 89318904 89319045 -185508 - AluJ SINE Alu -15 297 155 1485 146 39 5 chr17 89319045 89319500 -185053 - MER51A LTR ERV1 -2 632 2 949 168 39 0 chr17 89319500 89319655 -184898 - AluJ SINE Alu -151 161 1 955 84 23 0 chr17 89319671 89319802 -184751 + AluSc SINE Alu 1 134 -175 1426 162 109 39 chr17 89319954 89320312 -184241 + L1MB2 LINE L1 5789 6171 0 300 308 108 0 chr17 89321348 89321468 -183085 - L1ME3A LINE L1 -7 6163 6031 218 329 14 0 chr17 89321758 89321828 -182725 + MIR SINE MIR 79 149 -59 198 0 0 0 chr17 89321983 89322005 -182548 + (T)n Simple_repeat Simple_repeat 1 22 0 210 288 63 36 chr17 89322446 89322557 -181996 - L2 LINE L2 -1 3271 3158 228 333 0 0 chr17 89322697 89322772 -181781 + L1ME3A LINE L1 5605 5679 -442 2041 119 10 16 chr17 89322784 89323096 -181457 + AluSx SINE Alu 1 310 -2 309 412 55 15 chr17 89323256 89323455 -181098 + L1ME3A LINE L1 5774 5980 -190 344 249 70 60 chr17 89323493 89323694 -180859 + L1ME3A LINE L1 5963 6165 -5 825 175 97 0 chr17 89323783 89323937 -180616 + FAM SINE Alu 3 171 -4 2450 60 0 3 chr17 89323996 89324298 -180255 + AluY SINE Alu 1 301 -10 1420 196 4 4 chr17 89324302 89324567 -179986 + AluJo SINE Alu 36 300 -12 2241 95 0 0 chr17 89325373 89325669 -178884 + AluSx SINE Alu 1 296 -16 22 0 0 0 chr17 89326539 89326561 -177992 + AT_rich Low_complexity Low_complexity 1 22 0 1817 164 3 7 chr17 89326964 89327263 -177290 + AluJo SINE Alu 1 298 -14 243 0 0 0 chr17 89327590 89327617 -176936 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 360 0 0 0 chr17 89327616 89327656 -176897 + (CA)n Simple_repeat Simple_repeat 1 40 0 2343 85 3 0 chr17 89328369 89328675 -175878 - AluSp SINE Alu -6 307 1 27 0 0 0 chr17 89329594 89329621 -174932 + AT_rich Low_complexity Low_complexity 1 27 0 2042 119 3 13 chr17 89330934 89331245 -173308 + AluSp SINE Alu 1 308 -5 2200 120 0 0 chr17 89331781 89332090 -172463 - AluSx SINE Alu 0 312 4 1435 128 0 64 chr17 89334801 89334971 -169582 - AluSx SINE Alu -22 290 140 2439 61 0 0 chr17 89334971 89335267 -169286 - AluY SINE Alu -15 296 1 1435 128 0 64 chr17 89335267 89335347 -169206 - AluSx SINE Alu -172 140 56 241 360 0 0 chr17 89335992 89336092 -168461 + U13 snRNA snRNA 4 103 -1 2241 71 0 10 chr17 89336754 89337049 -167504 + AluSx SINE Alu 1 292 -20 2009 87 53 37 chr17 89338041 89338341 -166212 - AluSc SINE Alu -4 305 1 1567 171 87 0 chr17 89338800 89339086 -165467 - AluJb SINE Alu -1 311 1 319 246 27 29 chr17 89339691 89340003 -164550 + G-rich Low_complexity Low_complexity 1 311 0 2141 111 10 0 chr17 89340054 89340351 -164202 + AluSp SINE Alu 1 300 -13 476 237 65 36 chr17 89341971 89342110 -162443 - MER5A DNA MER1_type -1 188 46 180 353 30 78 chr17 89341972 89342139 -162414 + MER5A DNA MER1_type 17 175 -14 * 520 266 132 36 chr17 89342156 89342188 -162365 - Charlie2 DNA MER1_type -31 2831 2803 1906 126 3 26 chr17 89342188 89342490 -162063 + AluSg SINE Alu 2 296 -14 520 266 132 36 chr17 89342490 89342844 -161709 - Charlie2 DNA MER1_type -59 2803 2408 2220 101 0 0 chr17 89343180 89343476 -161077 + AluSx SINE Alu 1 296 -16 716 174 15 8 chr17 89343737 89343869 -160684 - FLAM_C SINE Alu 0 133 1 417 157 66 13 chr17 89343873 89344025 -160528 - L1M4 LINE L1 -753 5393 5237 537 239 0 22 chr17 89344025 89344163 -160390 - Tigger1 DNA MER2_type -1 2417 2283 1879 148 0 3 chr17 89345328 89345618 -158935 - AluJb SINE Alu -23 289 1 315 161 0 0 chr17 89346757 89346813 -157740 + GA-rich Low_complexity Low_complexity 2 57 0 2433 57 7 0 chr17 89347627 89347925 -156628 + AluY SINE Alu 1 300 -11 1574 153 25 7 chr17 89348173 89348448 -156105 + AluJb SINE Alu 1 280 -32 1782 164 20 3 chr17 89348720 89349013 -155540 - AluJo SINE Alu -14 298 1 386 262 127 0 chr17 89350031 89350157 -154396 - L1M4 LINE L1 -1430 4716 4575 2254 99 10 0 chr17 89351048 89351351 -153202 - AluSq SINE Alu -7 306 1 680 209 188 29 chr17 89351387 89351626 -152927 - L1MA5A LINE L1 -4 6293 6017 741 150 63 0 chr17 89351662 89351789 -152764 - AluJo SINE Alu -177 135 1 349 244 11 0 chr17 89351867 89351957 -152596 - MSTD LTR MaLR -9 387 297 403 328 51 11 chr17 89352007 89352184 -152369 - MSTD LTR MaLR -212 184 1 2087 106 10 26 chr17 89352495 89352806 -151747 - AluSq SINE Alu -7 306 1 1445 227 65 13 chr17 89353649 89354036 -150517 - MLT2D LTR ERVL -7 407 1 26 0 0 0 chr17 89357966 89357992 -146561 + AT_rich Low_complexity Low_complexity 1 26 0 2310 67 3 7 chr17 89358348 89358645 -145908 + AluY SINE Alu 1 296 -15 465 324 69 57 chr17 89359793 89360197 -144356 + L1MDb LINE L1 783 1191 -5218 2020 81 15 0 chr17 89360291 89360564 -143989 + AluSg SINE Alu 5 281 -29 1237 207 37 135 chr17 89360788 89360942 -143611 + L1MB2 LINE L1 5319 5486 -682 306 149 179 0 chr17 89360942 89361009 -143544 - AluJ/FRAM SINE Alu -4 298 220 1237 207 37 135 chr17 89361009 89361145 -143408 + L1MB2 LINE L1 5486 5634 -534 683 187 0 50 chr17 89361145 89361284 -143269 + AluJo/FLAM SINE Alu 1 132 -170 2203 96 3 7 chr17 89361284 89361587 -142966 + AluSx SINE Alu 1 302 -10 1237 207 37 135 chr17 89361587 89361620 -142933 + L1MB2 LINE L1 5633 5668 -500 1996 128 0 13 chr17 89361620 89361925 -142628 + AluSg SINE Alu 1 301 -9 1237 207 37 135 chr17 89361925 89362137 -142416 + L1MB2 LINE L1 5668 5822 -346 754 197 0 0 chr17 89362156 89362278 -142275 - FLAM_C SINE Alu -20 123 2 1239 211 114 7 chr17 89362280 89362588 -141965 + L1MB2 LINE L1 5824 6164 -7 2301 78 10 0 chr17 89362839 89363135 -141418 - AluSq SINE Alu -14 299 1 1943 133 6 16 chr17 89363214 89363530 -141023 + AluSp SINE Alu 1 313 0 1191 82 82 0 chr17 89363530 89363700 -140853 + AluSg/x SINE Alu 124 307 -3 1389 217 132 63 chr17 89364053 89364559 -139994 + LTR10B LTR ERV1 1 541 -6 2106 168 92 17 chr17 89364769 89365181 -139372 - MER21A LTR ERV1 -7 924 482 338 233 16 2 chr17 89365180 89365303 -139250 - MER21A LTR ERV1 -528 335 191 * 1075 137 5 63 chr17 89365307 89365497 -139056 + AluSx SINE Alu 5 183 -129 1870 155 3 25 chr17 89366102 89366278 -138275 - AluJo SINE Alu -2 310 143 2370 78 3 0 chr17 89366278 89366586 -137967 - AluSp SINE Alu -2 311 3 1870 155 3 25 chr17 89366586 89366726 -137827 - AluJo SINE Alu -169 143 1 3177 178 177 28 chr17 89366870 89367830 -136723 + MER52A LTR ERV1 1 1274 -4 2163 119 0 0 chr17 89369234 89369529 -135024 + AluSq SINE Alu 1 295 -18 921 164 68 132 chr17 89369537 89369847 -134706 + AluJb SINE Alu 1 290 -12 216 0 0 0 chr17 89369864 89369888 -134665 + (T)n Simple_repeat Simple_repeat 1 24 0 1117 203 46 4 chr17 89369998 89370239 -134314 + AluJb SINE Alu 49 299 -13 2457 56 0 0 chr17 89370304 89370608 -133945 + AluY SINE Alu 1 304 -7 922 123 8 0 chr17 89370670 89370800 -133753 - FLAM_C SINE Alu -2 131 1 180 77 0 0 chr17 89370810 89370836 -133717 + (A)n Simple_repeat Simple_repeat 1 26 0 1958 148 0 3 chr17 89370838 89371149 -133404 + AluSq SINE Alu 1 310 -3 1522 234 73 23 chr17 89371198 89371311 -133242 + L1ME LINE L1 869 975 -5409 1316 233 0 45 chr17 89371311 89371620 -132933 + AluJb SINE Alu 1 295 -17 1522 234 73 23 chr17 89371620 89372027 -132526 + L1ME LINE L1 975 1415 -4969 1011 238 73 26 chr17 89372020 89372360 -132193 + L1 LINE L1 4015 4370 -1776 * 1176 131 60 161 chr17 89372360 89372447 -132106 + AluJb SINE Alu 1 95 -207 2109 105 0 10 chr17 89372447 89372760 -131793 - AluSp SINE Alu -3 310 1 1176 131 60 161 chr17 89372760 89372850 -131703 + AluJb SINE Alu 95 193 -109 2135 122 0 3 chr17 89372850 89373161 -131392 + AluSx SINE Alu 1 310 -2 1176 131 60 161 chr17 89373161 89373317 -131236 + AluJb SINE Alu 193 301 -1 1699 141 39 7 chr17 89373324 89373608 -130945 + AluJo SINE Alu 1 293 -19 781 219 80 0 chr17 89374244 89374268 -130285 + L1ME LINE L1 3965 3986 -2396 2094 105 14 0 chr17 89374268 89374563 -129990 - AluSx SINE Alu -12 300 2 781 219 80 0 chr17 89374563 89374739 -129814 + L1ME LINE L1 3986 4181 -2201 517 112 255 0 chr17 89374940 89375038 -129515 + FLAM_C SINE Alu 2 124 -19 21 36 0 0 chr17 89375133 89375161 -129392 + AT_rich Low_complexity Low_complexity 1 28 0 2310 65 3 0 chr17 89378862 89379154 -125399 - AluSx SINE Alu -19 293 1 2309 88 0 3 chr17 89379961 89380267 -124286 - AluSx SINE Alu -7 305 1 1302 108 40 18 chr17 89380582 89380804 -123749 + AluJo SINE Alu 85 311 -1 1999 109 3 0 chr17 89382189 89382496 -122057 + AluSx SINE Alu 1 308 0 25 0 0 0 chr17 89382820 89382845 -121708 + AT_rich Low_complexity Low_complexity 1 25 0 1730 110 0 0 chr17 89383082 89383319 -121234 - AluSg/x SINE Alu -4 306 70 1510 154 11 4 chr17 89383586 89383877 -120676 + AluSx SINE Alu 16 308 0 25 0 0 0 chr17 89384196 89384221 -120332 + AT_rich Low_complexity Low_complexity 1 25 0 207 337 69 0 chr17 89384338 89384439 -120114 + MER5C DNA MER1_type 45 152 -172 2179 114 3 0 chr17 89384458 89384765 -119788 - AluSx SINE Alu -4 308 1 753 292 158 31 chr17 89385543 89385847 -118706 + L1ME LINE L1 4587 4851 -1531 2089 92 0 7 chr17 89385847 89386128 -118425 - AluY SINE Alu -16 295 17 753 292 158 31 chr17 89386128 89386457 -118096 + L1ME LINE L1 4851 5300 -1082 2133 97 20 0 chr17 89386522 89386820 -117733 + AluSx SINE Alu 1 304 -8 314 296 9 9 chr17 89386821 89386929 -117624 - L1MEc LINE L1 -4576 1820 1713 758 127 127 0 chr17 89386934 89387052 -117501 + AluJo SINE Alu 2 134 -178 2175 67 14 17 chr17 89387053 89387350 -117203 + AluY SINE Alu 1 296 -15 2273 97 0 3 chr17 89387351 89387662 -116891 + AluSg SINE Alu 1 310 0 1442 134 13 0 chr17 89387848 89388072 -116481 + AluSg/x SINE Alu 79 305 -7 722 270 117 52 chr17 89388074 89388493 -116060 + L1ME LINE L1 5516 5961 -441 1908 109 35 0 chr17 89388623 89388908 -115645 - AluY SINE Alu -16 295 1 2290 75 3 0 chr17 89388973 89389265 -115288 - AluY SINE Alu -18 293 1 22 35 0 0 chr17 89390220 89390249 -114304 + AT_rich Low_complexity Low_complexity 1 29 0 245 143 0 0 chr17 89390259 89390294 -114259 + Alu SINE Alu 245 279 -20 2274 88 10 7 chr17 89390465 89390772 -113781 + AluSc SINE Alu 1 308 -1 1932 171 0 0 chr17 89392195 89392505 -112048 - AluJb SINE Alu -2 310 1 1272 123 198 24 chr17 89392673 89392925 -111628 + AluJo SINE Alu 5 300 -2 1752 153 3 3 chr17 89392928 89393229 -111324 + AluJb SINE Alu 1 301 -11 998 162 0 0 chr17 89395328 89395482 -109071 - FAM SINE Alu -11 174 21 2222 111 0 3 chr17 89395487 89395794 -108759 - AluSx SINE Alu -6 306 1 2712 0 0 0 chr17 89395805 89396102 -108451 - AluYa5 SINE Alu -14 297 1 1696 120 15 0 chr17 89396355 89396622 -107931 + AluSc SINE Alu 39 309 0 1691 182 0 17 chr17 89396668 89396970 -107583 - AluJo SINE Alu -6 306 10 843 142 15 0 chr17 89397258 89397392 -107161 + AluJo SINE Alu 1 136 -176 2036 109 20 3 chr17 89397400 89397694 -106859 + AluSx SINE Alu 2 300 -12 999 192 8 15 chr17 89397724 89398038 -106515 + L1M4 LINE L1 5160 5470 -714 22 56 0 0 chr17 89398285 89398321 -106232 + GC_rich Low_complexity Low_complexity 1 36 0 746 136 0 45 chr17 89400066 89400198 -104355 + FRAM SINE Alu 40 165 -11 304 262 110 36 chr17 89400206 89400536 -104017 + MLT1D LTR MaLR 48 458 -9 204 40 0 0 chr17 89400685 89400710 -103843 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 213 94 0 0 chr17 89400709 89400741 -103812 + (TA)n Simple_repeat Simple_repeat 2 33 0 1276 164 0 9 chr17 89400741 89400955 -103598 - AluJb SINE Alu -100 212 1 1738 111 34 20 chr17 89401083 89401381 -103172 + AluSq SINE Alu 1 302 -11 1373 205 174 19 chr17 89401401 89401813 -102740 + MLT1D LTR MaLR 1 476 -29 1126 259 128 33 chr17 89401813 89401885 -102668 + MLT1D LTR MaLR 1 65 -440 2054 114 7 13 chr17 89401885 89402193 -102360 + AluSg SINE Alu 1 306 -4 1126 259 128 33 chr17 89402193 89402575 -101978 + MLT1D LTR MaLR 65 498 -7 1565 156 14 21 chr17 89402835 89403123 -101430 + AluJo SINE Alu 16 301 -11 792 268 146 15 chr17 89403423 89403766 -100787 + MER90 LTR ERV1 81 468 -146 2024 138 0 3 chr17 89404088 89404385 -100168 - AluSx SINE Alu -16 296 1 664 257 11 32 chr17 89404655 89404842 -99711 - MLT1C LTR MaLR 0 467 285 2072 124 7 0 chr17 89405475 89405774 -98779 - AluSg SINE Alu -9 301 1 2319 70 0 0 chr17 89406262 89406568 -97985 + AluSp SINE Alu 1 306 0 1137 238 134 0 chr17 89408350 89408716 -95837 + MLT1C LTR MaLR 53 467 0 456 326 0 22 chr17 89409505 89409689 -94864 + (CA)n Simple_repeat Simple_repeat 1 180 0 508 300 0 27 chr17 89409711 89410236 -94317 + (CA)n Simple_repeat Simple_repeat 1 510 0 209 277 15 31 chr17 89410237 89410302 -94251 + (CACG)n Simple_repeat Simple_repeat 4 67 0 2241 115 0 0 chr17 89411134 89411446 -93107 + AluSx SINE Alu 1 312 0 204 277 35 7 chr17 89413776 89413917 -90636 + (TGG)n Simple_repeat Simple_repeat 2 146 0 1372 140 9 5 chr17 89414762 89414984 -89569 - AluJb SINE Alu -8 304 82 204 125 0 0 chr17 89415091 89415123 -89430 + (GGGGA)n Simple_repeat Simple_repeat 1 32 0 * 228 135 0 0 chr17 89415122 89415159 -89394 + (GAAA)n Simple_repeat Simple_repeat 1 37 0 390 136 280 8 chr17 89415192 89415317 -89236 - MER21A LTR ERV1 -772 159 1 2306 77 0 0 chr17 89415678 89415964 -88589 - AluSc SINE Alu -23 286 1 369 383 74 18 chr17 89416003 89416220 -88333 - L1ME4a LINE L1 -206 5915 5687 309 323 81 0 chr17 89416234 89416358 -88195 - L1ME4a LINE L1 -513 5608 5475 237 216 80 37 chr17 89416735 89416897 -87656 + (GGCTG)n Simple_repeat Simple_repeat 1 169 0 2102 108 0 0 chr17 89417248 89417534 -87019 - AluSc SINE Alu -6 303 18 2206 95 0 3 chr17 89417872 89418168 -86385 - AluSx SINE Alu -11 301 7 2729 221 88 32 chr17 89418251 89418521 -86032 + MER21A LTR ERV1 1 254 -677 2080 78 0 11 chr17 89418521 89418803 -85750 + AluY SINE Alu 1 279 -32 2729 221 88 32 chr17 89418803 89419058 -85495 + MER21A LTR ERV1 254 493 -438 1707 181 63 3 chr17 89419058 89419373 -85180 + MER1B DNA MER1_type 4 337 0 2729 221 88 32 chr17 89419373 89419727 -84826 + MER21A LTR ERV1 493 931 0 666 279 33 60 chr17 89419935 89420054 -84499 - MIR SINE MIR -21 241 129 2243 103 0 0 chr17 89420054 89420355 -84198 + AluSg SINE Alu 1 301 -9 666 279 33 60 chr17 89420355 89420450 -84103 - MIR SINE MIR -133 129 33 219 318 16 95 chr17 89421597 89421723 -82830 - L3 LINE CR1 -594 983 868 1050 83 0 0 chr17 89421854 89421986 -82567 - AluSq/x SINE Alu -180 132 1 979 88 0 15 chr17 89422076 89422213 -82340 + AluSq/x SINE Alu 1 135 -178 1924 139 4 0 chr17 89422213 89422528 -82025 + AluSx SINE Alu 1 316 0 500 110 66 0 chr17 89422529 89422620 -81933 + HSMAR2 DNA Mariner 1204 1300 -2 1913 105 11 0 chr17 89422934 89423201 -81352 - AluY SINE Alu -41 270 1 22 0 0 0 chr17 89423201 89423223 -81330 + AT_rich Low_complexity Low_complexity 1 22 0 1337 198 31 21 chr17 89424330 89424618 -79935 - AluJo SINE Alu -21 291 1 28 0 0 0 chr17 89424632 89424660 -79893 + AT_rich Low_complexity Low_complexity 1 28 0 1567 101 0 0 chr17 89424662 89424871 -79682 + AluSx SINE Alu 1 209 -103 1568 52 0 16 chr17 89424871 89425063 -79490 + AluY SINE Alu 1 191 -120 356 94 0 0 chr17 89425063 89425116 -79437 + AluY SINE Alu 245 297 -5 826 92 0 0 chr17 89425116 89425225 -79328 + AluSg/x SINE Alu 190 298 -12 289 87 22 0 chr17 89425231 89425277 -79276 - AluJ/FLAM SINE Alu -201 101 55 2138 97 0 7 chr17 89425292 89425591 -78962 + AluSx SINE Alu 16 312 0 1368 227 158 38 chr17 89425612 89426105 -78448 + L1ME3A LINE L1 5280 5712 -458 2071 114 10 0 chr17 89426105 89426403 -78150 + AluSg SINE Alu 1 301 -9 1368 227 158 38 chr17 89426403 89426473 -78080 + L1ME3A LINE L1 5712 5772 -398 2223 80 13 10 chr17 89426473 89426785 -77768 + AluSp SINE Alu 1 313 0 1368 227 158 38 chr17 89426785 89427009 -77544 + L1ME3A LINE L1 5772 6163 -7 1958 86 55 0 chr17 89427210 89427502 -77051 + AluSx SINE Alu 1 308 -4 2067 111 44 0 chr17 89428986 89429284 -75269 + AluSx SINE Alu 1 311 -1 305 296 65 37 chr17 89429296 89429404 -75149 + L1M4 LINE L1 4783 4893 -1253 1023 116 14 0 chr17 89429509 89429655 -74898 - AluSq/x SINE Alu -164 148 1 2362 56 0 0 chr17 89429667 89429976 -74577 - AluSg SINE Alu 0 309 1 757 142 0 0 chr17 89430760 89430866 -73687 - AluSq/x SINE Alu -207 106 1 2309 84 0 0 chr17 89430916 89431214 -73339 - AluSg SINE Alu -12 298 1 442 232 17 79 chr17 89431362 89431539 -73014 - HAL1 LINE L1 -127 2380 2215 232 261 0 48 chr17 89431906 89432094 -72459 + (CTCA)n Simple_repeat Simple_repeat 2 180 0 234 322 110 0 chr17 89433176 89433376 -71177 - L2 LINE L2 -227 3086 2858 521 196 45 9 chr17 89433446 89433558 -70995 - L1MB7 LINE L1 -19 6165 6050 2269 104 10 0 chr17 89433558 89433866 -70687 - AluSp SINE Alu 0 313 3 1068 77 0 0 chr17 89433874 89434004 -70549 - AluSp SINE Alu -183 130 1 862 168 114 5 chr17 89434004 89434206 -70347 - L1MB7 LINE L1 -126 6058 5835 799 199 22 55 chr17 89434313 89434494 -70059 + AluSc SINE Alu 132 306 -3 1910 158 10 0 chr17 89434500 89434797 -69756 + AluJo SINE Alu 1 300 -12 2303 89 0 19 chr17 89436705 89437018 -67535 - AluSq SINE Alu -6 307 1 391 300 23 0 chr17 89437118 89437248 -67305 - L1MB7 LINE L1 -2089 5719 5587 1203 112 12 0 chr17 89437276 89437445 -67108 + AluSg/x SINE Alu 115 285 -25 791 80 0 0 chr17 89437552 89437652 -66901 - AluSq/x SINE Alu -174 139 40 2094 128 3 3 chr17 89437656 89437960 -66593 - AluSx SINE Alu -8 304 1 2137 126 7 0 chr17 89439360 89439670 -64883 - AluSx SINE Alu 0 312 1 829 181 0 37 chr17 89439787 89440014 -64539 - AluJb SINE Alu -47 265 2 1946 146 7 3 chr17 89440166 89440468 -64085 + AluSg SINE Alu 6 308 -2 1794 133 51 14 chr17 89440484 89440605 -63948 + AluSx SINE Alu 1 116 -196 2472 60 0 0 chr17 89440605 89440906 -63647 + AluY SINE Alu 1 301 -10 1794 133 51 14 chr17 89440906 89441077 -63476 + AluSx SINE Alu 116 304 -8 2004 140 0 17 chr17 89441114 89441414 -63139 + AluSx SINE Alu 1 295 -17 300 53 0 0 chr17 89441414 89441452 -63101 + (TA)n Simple_repeat Simple_repeat 2 39 0 212 208 0 26 chr17 89441607 89441684 -62869 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 2456 50 0 3 chr17 89442963 89443260 -61293 - AluY SINE Alu -9 302 7 2308 57 14 0 chr17 89443341 89443660 -60893 - AluY SINE Alu 0 323 1 331 339 27 59 chr17 89444641 89444827 -59726 - L1ME4a LINE L1 -77 6044 5865 2242 93 30 0 chr17 89444834 89445135 -59418 + AluSg SINE Alu 1 310 0 1418 261 64 34 chr17 89445489 89445501 -59052 + HAL1b LINE L1 236 246 -1102 210 71 0 0 chr17 89445501 89445529 -59024 + (CA)n Simple_repeat Simple_repeat 2 29 0 1418 261 64 34 chr17 89445529 89446138 -58415 + HAL1b LINE L1 246 876 -472 2191 123 0 0 chr17 89446138 89446447 -58106 - AluSg SINE Alu -1 309 1 868 224 15 10 chr17 89446487 89446692 -57861 + AluJb SINE Alu 102 307 -5 2175 81 32 0 chr17 89446841 89447125 -57428 - AluSp SINE Alu -20 293 1 287 238 48 0 chr17 89448856 89448940 -55613 - MLT1A2 LTR MaLR -286 88 1 845 238 111 29 chr17 89448947 89449119 -55434 - L1MEc LINE L1 -3620 2595 2439 2049 126 7 3 chr17 89449119 89449428 -55125 - AluSq SINE Alu -3 310 1 845 238 111 29 chr17 89449428 89449782 -54771 - L1MEc LINE L1 -3776 2439 2053 2146 116 3 0 chr17 89450363 89450664 -53889 + AluSx SINE Alu 1 302 -10 2244 105 0 6 chr17 89450754 89451067 -53486 + AluSx SINE Alu 1 311 -1 250 225 14 14 chr17 89451106 89451177 -53376 - LTR37B LTR ERV1 -181 287 217 469 167 0 101 chr17 89451745 89451943 -52610 + C-rich Low_complexity Low_complexity 1 178 0 221 137 0 87 chr17 89451973 89452134 -52419 + (CCCCCT)n Simple_repeat Simple_repeat 4 150 0 1077 159 0 6 chr17 89452657 89452839 -51714 + AluJo SINE Alu 120 300 -12 2229 95 0 10 chr17 89452856 89453150 -51403 + AluY SINE Alu 1 291 -20 305 400 24 18 chr17 89453156 89453321 -51232 - L1ME4a LINE L1 -2213 5595 5430 2284 106 6 0 chr17 89453332 89453643 -50910 - AluSp SINE Alu 0 313 1 1906 159 0 3 chr17 89453650 89453946 -50607 - AluJb SINE Alu -7 305 11 31 0 0 0 chr17 89453951 89453982 -50571 + AT_rich Low_complexity Low_complexity 1 31 0 513 275 0 0 chr17 89454303 89454470 -50083 + (CA)n Simple_repeat Simple_repeat 1 167 0 2050 90 0 0 chr17 89455565 89455832 -48721 + AluSq SINE Alu 34 300 -13 2262 91 3 3 chr17 89455833 89456163 -48390 + AluSp SINE Alu 1 313 0 2343 93 0 0 chr17 89456165 89456476 -48077 + AluY SINE Alu 1 311 0 2105 109 0 0 chr17 89456579 89456889 -47664 + AluSq SINE Alu 1 310 0 1329 85 16 11 chr17 89457118 89457307 -47246 - AluSq SINE Alu -123 190 1 2741 240 49 30 chr17 89457311 89457713 -46840 + L1ME1 LINE L1 5176 5569 -597 2430 60 0 3 chr17 89457713 89458014 -46539 - AluY SINE Alu -11 300 1 2741 240 49 30 chr17 89458014 89458328 -46225 + L1ME1 LINE L1 5569 5919 -247 8237 48 3 0 chr17 89458328 89459294 -45259 + LTR5 LTR ERVK 1 969 0 2741 240 49 30 chr17 89459294 89459547 -45006 + L1ME1 LINE L1 5919 6166 0 453 285 104 30 chr17 89459976 89460192 -44361 + MIR SINE MIR 1 225 -37 315 193 25 12 chr17 89461200 89461294 -43259 + L1M4 LINE L1 5749 5845 -333 1188 130 0 0 chr17 89461396 89461565 -42988 + AluSg/x SINE Alu 138 306 -6 1382 188 73 6 chr17 89462344 89462674 -41879 + MLT1A1 LTR MaLR 11 362 -3 404 269 54 30 chr17 89463151 89463318 -41235 - MLT1K LTR MaLR -17 571 401 2419 60 3 25 chr17 89463519 89463837 -40716 - AluY SINE Alu 0 311 1 2162 75 7 7 chr17 89463837 89464129 -40424 - AluSq SINE Alu -21 292 1 834 243 213 13 chr17 89464162 89464706 -39847 + HAL1 LINE L1 1040 1692 -815 399 258 178 0 chr17 89464708 89464921 -39632 + HAL1 LINE L1 1760 2010 -497 548 95 61 7 chr17 89465885 89466032 -38521 + (CA)n Simple_repeat Simple_repeat 2 156 0 358 139 40 10 chr17 89466139 89466240 -38313 + (CA)n Simple_repeat Simple_repeat 2 105 0 2269 68 0 14 chr17 89466356 89466652 -37901 - AluSg SINE Alu -18 292 1 291 333 12 6 chr17 89467424 89467586 -36967 + G-rich Low_complexity Low_complexity 4 166 0 275 210 16 0 chr17 89467920 89467982 -36571 + Ricksha DNA DNA 360 422 -1624 301 200 0 0 chr17 89467984 89468054 -36499 + MLT2B3 LTR ERVL 346 415 -139 410 221 63 11 chr17 89468439 89468534 -36019 + MIR SINE MIR 113 212 -50 2391 72 0 0 chr17 89468622 89468928 -35625 + AluSc SINE Alu 1 306 -3 3679 145 70 31 chr17 89469650 89470494 -34059 + MER4D LTR ERV1 1 610 0 2633 158 89 80 chr17 89470651 89471244 -33309 + LTR8A LTR ERV1 3 604 -123 1856 90 62 31 chr17 89471244 89471533 -33020 + AluY SINE Alu 1 298 -13 2633 158 89 80 chr17 89471533 89471649 -32904 + LTR8A LTR ERV1 604 718 -9 2182 93 13 16 chr17 89471649 89471961 -32592 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr17 89472922 89472957 -31596 + GC_rich Low_complexity Low_complexity 1 35 0 406 287 93 54 chr17 89473710 89473794 -30759 - L1M1 LINE L1 -743 5403 5324 2206 108 0 13 chr17 89473794 89474110 -30443 + AluSx SINE Alu 1 312 0 406 287 93 54 chr17 89474110 89474373 -30180 - L1M1 LINE L1 -822 5324 5081 2179 87 17 3 chr17 89475399 89475697 -28856 - AluSx SINE Alu -10 302 1 181 319 0 0 chr17 89475953 89476000 -28553 - MIR SINE MIR -85 123 77 2201 105 3 3 chr17 89477108 89477413 -27140 - AluSg1 SINE Alu -4 305 1 373 239 22 39 chr17 89478642 89478822 -25731 + C-rich Low_complexity Low_complexity 4 180 0 25 51 0 0 chr17 89479018 89479057 -25496 + GC_rich Low_complexity Low_complexity 1 39 0 195 271 0 0 chr17 89479689 89479759 -24794 + (TG)n Simple_repeat Simple_repeat 1 70 0 300 345 0 0 chr17 89479779 89479892 -24661 + (TG)n Simple_repeat Simple_repeat 2 114 0 430 343 0 6 chr17 89479915 89480090 -24463 + (TG)n Simple_repeat Simple_repeat 1 174 0 1682 128 84 0 chr17 89480526 89480777 -23776 - AluSx SINE Alu -18 294 23 226 255 78 39 chr17 89481529 89481631 -22922 - L3 LINE CR1 -166 1411 1306 2112 137 0 0 chr17 89481716 89482015 -22538 + AluSx SINE Alu 1 299 -13 2222 62 21 3 chr17 89482015 89482303 -22250 + AluY SINE Alu 1 293 -18 456 199 75 27 chr17 89482380 89482526 -22027 + MLT1C LTR MaLR 6 158 -309 259 259 0 0 chr17 89482525 89482583 -21970 - Charlie1 DNA MER1_type -2703 58 1 * 462 229 64 0 chr17 89483652 89483761 -20792 - MER5A DNA MER1_type -70 119 4 443 269 29 0 chr17 89484055 89484226 -20327 + C-rich Low_complexity Low_complexity 5 180 0 381 284 30 18 chr17 89484237 89484406 -20147 + C-rich Low_complexity Low_complexity 6 176 0 311 256 23 0 chr17 89485607 89485693 -18860 - MLT1A2 LTR MaLR -283 91 4 355 306 74 8 chr17 89485919 89486122 -18431 - MER20 DNA MER1_type -1 218 1 188 349 48 0 chr17 89486404 89486487 -18066 - MIR SINE MIR -66 196 110 2202 114 0 0 chr17 89486567 89486873 -17680 - AluSx SINE Alu -6 306 1 586 252 20 0 chr17 89486881 89487028 -17525 - L1MB3 LINE L1 -1 6182 6033 2230 81 3 3 chr17 89487553 89487848 -16705 - AluSq SINE Alu -18 295 1 180 0 0 0 chr17 89488520 89488540 -16013 + (CGGGG)n Simple_repeat Simple_repeat 2 21 0 213 351 0 0 chr17 89488960 89489034 -15519 + (CACG)n Simple_repeat Simple_repeat 2 75 0 2190 55 19 16 chr17 89489071 89489380 -15173 - AluY SINE Alu -1 310 1 684 110 195 0 chr17 89489381 89489499 -15054 - AluSg SINE Alu -169 141 1 688 255 102 71 chr17 89489634 89489928 -14625 - MLT1G LTR MaLR -167 394 86 2065 75 30 0 chr17 89489944 89490209 -14344 - AluSx SINE Alu -16 296 24 631 290 132 15 chr17 89490338 89490679 -13874 - HAL1 LINE L1 -794 1713 1333 1958 135 3 14 chr17 89491067 89491363 -13190 + AluSg SINE Alu 1 293 -17 2096 107 4 0 chr17 89492061 89492342 -12211 - AluSx SINE Alu -30 282 1 421 150 0 0 chr17 89492500 89492560 -11993 - AluJ/FLAM SINE Alu -252 60 1 1259 222 60 38 chr17 89493616 89493938 -10615 - MLT1C LTR MaLR -56 411 98 2251 97 0 23 chr17 89493938 89494248 -10305 + AluSx SINE Alu 1 303 -9 2411 91 0 0 chr17 89494248 89494557 -9996 + AluSg SINE Alu 1 309 -1 1259 222 60 38 chr17 89494557 89494630 -9923 - MLT1C LTR MaLR -368 99 6 243 241 9 18 chr17 89495047 89495159 -9394 + C-rich Low_complexity Low_complexity 6 116 0 551 209 99 17 chr17 89495162 89495210 -9343 - L1ME1 LINE L1 -4 6162 6119 2272 107 3 0 chr17 89495210 89495518 -9035 - AluSq SINE Alu -4 309 1 551 209 99 17 chr17 89495518 89495641 -8912 - L1ME1 LINE L1 -47 6119 5977 4034 224 77 55 chr17 89495667 89496111 -8442 - L1ME1 LINE L1 -268 5898 5465 2393 80 0 0 chr17 89496111 89496411 -8142 - AluSx SINE Alu -12 300 1 4034 224 77 55 chr17 89496411 89496516 -8037 - L1ME1 LINE L1 -701 5465 5364 1547 162 9 61 chr17 89496516 89496844 -7709 - AluJo SINE Alu -1 311 1 4034 224 77 55 chr17 89496844 89497173 -7380 - L1ME1 LINE L1 -802 5364 5044 2125 106 0 0 chr17 89497173 89497487 -7066 - AluSg SINE Alu 0 314 1 4034 224 77 55 chr17 89497487 89498651 -5902 - L1ME1 LINE L1 -1122 5044 3806 219 230 0 75 chr17 89498943 89499104 -5449 + (CCCCAG)n Simple_repeat Simple_repeat 6 154 0 * 390 195 0 95 chr17 89499008 89499198 -5355 + C-rich Low_complexity Low_complexity 2 173 0 344 299 0 39 chr17 89499369 89499654 -4899 + C-rich Low_complexity Low_complexity 1 273 0 2245 107 0 0 chr17 89501485 89501783 -2770 - AluSx SINE Alu -14 298 1 5407 170 51 69 chr17 89501869 89503341 -1212 - MER52A LTR ERV1 0 1755 9 1170 86 0 12 chr17 89504389 89504551 -2 - AluSg/x SINE Alu -4 306 147